Citrus Sinensis ID: 026543
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 237 | 2.2.26 [Sep-21-2011] | |||||||
| Q08623 | 228 | Pseudouridine-5'-monophos | yes | no | 0.940 | 0.978 | 0.504 | 1e-58 | |
| Q94529 | 231 | Probable pseudouridine-5' | yes | no | 0.945 | 0.969 | 0.5 | 6e-56 | |
| Q9D5U5 | 234 | Pseudouridine-5'-monophos | yes | no | 0.962 | 0.974 | 0.471 | 2e-52 | |
| O59760 | 236 | Putative uncharacterized | yes | no | 0.877 | 0.881 | 0.368 | 1e-30 | |
| O14165 | 249 | Uncharacterized protein C | no | no | 0.860 | 0.819 | 0.327 | 2e-24 | |
| Q86ZR7 | 236 | Putative uncharacterized | yes | no | 0.915 | 0.919 | 0.343 | 3e-21 | |
| Q9X0Y1 | 216 | Phosphorylated carbohydra | yes | no | 0.738 | 0.810 | 0.340 | 6e-17 | |
| P54607 | 220 | Uncharacterized protein Y | yes | no | 0.839 | 0.904 | 0.299 | 8e-14 | |
| P44004 | 200 | Uncharacterized protein H | yes | no | 0.755 | 0.895 | 0.287 | 5e-11 | |
| P77475 | 188 | Fructose-1-phosphate phos | N/A | no | 0.738 | 0.930 | 0.315 | 1e-10 |
| >sp|Q08623|HDHD1_HUMAN Pseudouridine-5'-monophosphatase OS=Homo sapiens GN=HDHD1 PE=1 SV=3 | Back alignment and function desciption |
|---|
Score = 226 bits (576), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 114/226 (50%), Positives = 155/226 (68%), Gaps = 3/226 (1%)
Query: 8 KPITHVIFDMDGLLLDTEKFYTEVQELILARYNKTFDWSLKAKMMGKKAIEAAQVFVEET 67
+P+TH+IFDMDGLLLDTE+ Y+ V + I RY+K + W +K+ +MGKKA+EAAQ+ ++
Sbjct: 6 QPVTHLIFDMDGLLLDTERLYSVVFQEICNRYDKKYSWDVKSLVMGKKALEAAQIIIDVL 65
Query: 68 GISDKLSAEDFLVQREETLQTLFPTSELMPGASHLIRHLHAKGIPMCVATGSLARHFELK 127
+ +S E+ + + + L+ +FPT+ LMPGA LI HL GIP +AT S + F++K
Sbjct: 66 QLP--MSKEELVEESQTKLKEVFPTAALMPGAEKLIIHLRKHGIPFALATSSGSASFDMK 123
Query: 128 TQKHRELFSLMHHVVRGDDPEVKQGKPSPDIFLAAAKRFEGGPIDSQEILVFEDAPSGVL 187
T +H+E FSL H+V GDDPEV+ GKP PDIFLA AKRF P ++ LVFEDAP+GV
Sbjct: 124 TSRHKEFFSLFSHIVLGDDPEVQHGKPDPDIFLACAKRFSPPPA-MEKCLVFEDAPNGVE 182
Query: 188 AAKNAGMSVVMVPDPRLDSSYHSNADQLLSSLLGFNPKDWGLPPFE 233
AA AGM VVMVPD L + A +L+SL F P+ +GLP +E
Sbjct: 183 AALAAGMQVVMVPDGNLSRDLTTKATLVLNSLQDFQPELFGLPSYE 228
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Dephosphorylates pseudouridine 5'-phosphate, a potential intermediate in rRNA degradation. Pseudouridine is then excreted intact in urine. Homo sapiens (taxid: 9606) EC: 3EC: .EC: 1EC: .EC: 3EC: .EC: nEC: 6 |
| >sp|Q94529|GS1_DROME Probable pseudouridine-5'-monophosphatase OS=Drosophila melanogaster GN=Gs1l PE=2 SV=2 | Back alignment and function description |
|---|
Score = 217 bits (552), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 114/228 (50%), Positives = 149/228 (65%), Gaps = 4/228 (1%)
Query: 8 KPITHVIFDMDGLLLDTEKFYTEVQELILARYNKTFDWSLKAKMMGKKAIEAAQVFVEET 67
+ +TH +FDMDGLLLDTE+ YT E+IL Y KT+ + +K ++MG + A+ VE
Sbjct: 7 RKVTHCVFDMDGLLLDTERLYTVATEMILEPYGKTYPFEIKEQVMGLQTEPLARFMVEHY 66
Query: 68 GISDKLSAEDFLVQREETLQTLFPTSELMPGASHLIRHLHAKGIPMCVATGSLARHFELK 127
+ +S E++ Q+ + L ++LMPGA L+RHLHA +P C+AT S A ELK
Sbjct: 67 ELP--MSWEEYARQQRANTEILMRNAQLMPGAERLLRHLHANKVPFCLATSSGADMVELK 124
Query: 128 TQKHRELFSLMHHVVRGD-DPEVKQGKPSPDIFLAAAKRFEGGPIDSQEILVFEDAPSGV 186
T +HRELFSL +H V G D EV GKP+PDIFL AA RF G P + LVFED+P+GV
Sbjct: 125 TAQHRELFSLFNHKVCGSSDKEVVNGKPAPDIFLVAAGRF-GVPPKPSDCLVFEDSPNGV 183
Query: 187 LAAKNAGMSVVMVPDPRLDSSYHSNADQLLSSLLGFNPKDWGLPPFED 234
AA +AGM VVMVPDPRL S+A Q+L+SL F P+ +GLP F D
Sbjct: 184 TAANSAGMQVVMVPDPRLSQEKTSHATQVLASLADFKPEQFGLPAFTD 231
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Dephosphorylates pseudouridine 5'-phosphate, a potential intermediate in rRNA degradation. Drosophila melanogaster (taxid: 7227) EC: 3 EC: . EC: 1 EC: . EC: 3 EC: . EC: n EC: 6 |
| >sp|Q9D5U5|HDHD1_MOUSE Pseudouridine-5'-monophosphatase OS=Mus musculus GN=Hdhd1 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 205 bits (522), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 109/231 (47%), Positives = 144/231 (62%), Gaps = 3/231 (1%)
Query: 4 VSSKKPITHVIFDMDGLLLDTEKFYTEVQELILARYNKTFDWSLKAKMMGKKAIEAAQVF 63
V +P+T +IFD+DGL+L+TE YT+V E I RY K ++W +K+ +MGKKA+E AQ
Sbjct: 7 VPQFRPVTPLIFDLDGLILNTEDLYTDVFEEICNRYGKKYNWDVKSLVMGKKALETAQTI 66
Query: 64 VEETGISDKLSAEDFLVQREETLQTLFPTSELMPGASHLIRHLHAKGIPMCVATGSLARH 123
VE + +S E+ L + +E LQ + T+ MPGA LI HL +P +AT S
Sbjct: 67 VEFLNLP--ISKEELLKESQEKLQMVLHTAGFMPGAEELIHHLKKHRLPFALATSSETVT 124
Query: 124 FELKTQKHRELFSLMHHVVRGDDPEVKQGKPSPDIFLAAAKRFEGGPIDSQEILVFEDAP 183
F+ KT +H F L HH+V GDDPEVK GKP DIFL AKRF P D ++ LVFED+P
Sbjct: 125 FQTKTSRHTGFFGLFHHIVLGDDPEVKNGKPGMDIFLTCAKRFSPPP-DPKDCLVFEDSP 183
Query: 184 SGVLAAKNAGMSVVMVPDPRLDSSYHSNADQLLSSLLGFNPKDWGLPPFED 234
+GV AA + GM VVMVP L + A +LSSL F P+ +GLP F +
Sbjct: 184 NGVEAAIHCGMQVVMVPHENLSADLTRKATLVLSSLHDFKPELFGLPAFTE 234
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Dephosphorylates pseudouridine 5'-phosphate, a potential intermediate in rRNA degradation. Pseudouridine is then excreted intact in urine. Mus musculus (taxid: 10090) EC: 3 EC: . EC: 1 EC: . EC: 3 EC: . EC: n EC: 6 |
| >sp|O59760|YJM7_SCHPO Putative uncharacterized hydrolase C1020.07 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC1020.07 PE=3 SV=1 | Back alignment and function description |
|---|
Score = 132 bits (333), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 83/225 (36%), Positives = 126/225 (56%), Gaps = 17/225 (7%)
Query: 13 VIFDMDGLLLDTEKFYTEVQELILARYNKT-FDWSLKAKMMGKKAIEAAQVFVEETGISD 71
+FDMDGLL+DTE YT+ +IL RYNK F +KAKMMG+ + EA+++F++ +GI
Sbjct: 6 CLFDMDGLLVDTESIYTKSTNIILKRYNKGPFSMEVKAKMMGRTSKEASRIFLDWSGID- 64
Query: 72 KLSAEDFLVQREETLQTLFPTSELMPGASHLIRHLHAKGIPMCVATGSLARHFELKTQKH 131
L+ E+++ + ET L+ ++ +PG +L+ L + IP+ +AT S +FE K+
Sbjct: 65 -LTCEEYIALQRETQAELWRHTKPLPGVMNLLSKLKSLNIPIALATSSDTHNFEKKSAHL 123
Query: 132 RELFSLMH-HVVRGDDPE--VKQGKPSPDIFLAAAKRFEG-------GPIDSQEILVFED 181
LF +++ GDDP V +GKP PDI+ A K I + LVFED
Sbjct: 124 SHLFDHFDGNIITGDDPRLPVGRGKPHPDIWFIALKMINDKRKAQGQAEILPENCLVFED 183
Query: 182 APSGVLAAKNAGMSVVMVPD----PRLDSSYHSNADQLLSSLLGF 222
+ +GV + + AGM VV VPD P S AD+ ++ +L
Sbjct: 184 SITGVQSGRAAGMKVVWVPDVNILPFFSLSPEQAADKHITKVLSL 228
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Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812) EC: 3 EC: . EC: - EC: . EC: - EC: . EC: - |
| >sp|O14165|YDX1_SCHPO Uncharacterized protein C4C5.01 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC4C5.01 PE=3 SV=2 | Back alignment and function description |
|---|
Score = 112 bits (281), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 71/217 (32%), Positives = 119/217 (54%), Gaps = 13/217 (5%)
Query: 13 VIFDMDGLLLDTEKFYTEVQELILARYNKT-FDWSLKAKMMGKKAIEAAQVFVEETGISD 71
+FDMDGLL+D+E YT+ LIL RY K S+KA+MMG+ AA+V ++ + I
Sbjct: 11 CLFDMDGLLVDSETIYTKTTNLILDRYGKDPLPISVKAQMMGRPGSAAAKVVIDWSNIP- 69
Query: 72 KLSAEDFLVQREETLQTLFPTSELMPGASHLIRHLHAKGIPMCVATGSLARHFELKTQKH 131
++ + F+ +++ + + + MPGA LI +L GI + +AT S ++ +KT
Sbjct: 70 -MTPQQFVDEQQVIRAKFWSSLKPMPGAESLINNLSNHGIDIGLATSSNTANYNMKTAHL 128
Query: 132 RELF-SLMHHVVRGDDPEVK--QGKPSPDIFLAAAK-----RFEGG--PIDSQEILVFED 181
+ +F +V+ GD+P + +GKP PDI+L R + G + + + FED
Sbjct: 129 KHIFEKFGKNVITGDNPSIAPGRGKPFPDIWLKVLNLINESRKQRGLKALTPSQCIAFED 188
Query: 182 APSGVLAAKNAGMSVVMVPDPRLDSSYHSNADQLLSS 218
+ GV +AK AGM V+ VPD + + ++++ S
Sbjct: 189 SIPGVKSAKAAGMHVIWVPDAAIKNLVGDQLNEIVDS 225
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Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812) |
| >sp|Q86ZR7|YKD3A_YEAST Putative uncharacterized hydrolase YKL033W-A OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YKL033W-A PE=1 SV=2 | Back alignment and function description |
|---|
Score = 102 bits (253), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 80/233 (34%), Positives = 112/233 (48%), Gaps = 16/233 (6%)
Query: 10 ITHVIFDMDGLLLDTEKFYTEVQELILARYNKT-FDWSLKAKMMGKKAIEAAQVFVEETG 68
+ +FDMDGLL++TE YTE LA + K W +K K+ G EA + +E
Sbjct: 7 VKACLFDMDGLLINTEDIYTETLNETLAEFGKGPLTWDVKIKLQGLPGPEAGKRVIEHYK 66
Query: 69 ISDKLSAEDFLVQREETLQTL-FPTSELMPGASHLIRHLHAKGIPMCVATGSLARHFELK 127
+ L D +R LQ+L + T E +PGA +L+++L K IP+ + T S F K
Sbjct: 67 LPITLDEYD---ERNVALQSLKWGTCEFLPGALNLLKYLKLKNIPIALCTSSNKTKFRGK 123
Query: 128 TQKHRELFSLMHHVVRGDDPEVKQ--GKPSPDIFLAAAKRFEG---GPIDSQEILVFEDA 182
T E F L +V GDDP + + GKP PDI+ K I E +VFED
Sbjct: 124 TSHLEEGFDLFDTIVTGDDPRIAKGRGKPFPDIWQLGLKELNEKFHTDIKPDECIVFEDG 183
Query: 183 PSGVLAAKNAGMSVVMVPDPRLDS------SYHSNADQLLSSLLGFNPKDWGL 229
GV +AK G V+ VP P + + + +LLSSL +GL
Sbjct: 184 IPGVKSAKAFGAHVIWVPHPEAHAVLGDTEALLAGKGELLSSLEKLEMSKYGL 236
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Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292) EC: 3 EC: . EC: - EC: . EC: - EC: . EC: - |
| >sp|Q9X0Y1|P1254_THEMA Phosphorylated carbohydrates phosphatase TM_1254 OS=Thermotoga maritima (strain ATCC 43589 / MSB8 / DSM 3109 / JCM 10099) GN=TM_1254 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 87.8 bits (216), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 64/188 (34%), Positives = 99/188 (52%), Gaps = 13/188 (6%)
Query: 13 VIFDMDGLLLDTEKFYTEVQELILARYNKTFDWSLKAKMMGKKAIEAAQVFVEETGISDK 72
VIFDMDG+L+DTE Y E + Y K + L ++MG E + +E I D
Sbjct: 4 VIFDMDGVLMDTEPLYFEAYRRVAESYGKPYTEDLHRRIMGVPEREGLPILMEALEIKDS 63
Query: 73 LSAEDFLVQREETLQTLFPTSELM---PGASHLIRHLHAKGIPMCVATGSLARHFELKTQ 129
L E+F + E + +F SEL+ PG + + +K I + +AT + R L+
Sbjct: 64 L--ENFKKRVHEEKKRVF--SELLKENPGVREALEFVKSKRIKLALATSTPQRE-ALERL 118
Query: 130 KHRELFSLMHHVVRGDDPEVKQGKPSPDIFLAAAKRFEGGPIDSQEILVFEDAPSGVLAA 189
+ +L +V GD +VK GKP P+I+L +R P ++++VFED+ SGV AA
Sbjct: 119 RRLDLEKYFDVMVFGD--QVKNGKPDPEIYLLVLERLNVVP---EKVVVFEDSKSGVEAA 173
Query: 190 KNAGMSVV 197
K+AG+ +
Sbjct: 174 KSAGIERI 181
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Displays high phosphatase activity toward erythrose 4-phosphate, fructose 6-phosphate, 2-deoxyglucose 6-phosphate, and mannose 6-phosphate. May have a role in the intracellular metabolism of many phosphorylated carbohydrates. Thermotoga maritima (strain ATCC 43589 / MSB8 / DSM 3109 / JCM 10099) (taxid: 243274) EC: 3 EC: . EC: 1 EC: . EC: 3 EC: . EC: - |
| >sp|P54607|YHCW_BACSU Uncharacterized protein YhcW OS=Bacillus subtilis (strain 168) GN=yhcW PE=3 SV=1 | Back alignment and function description |
|---|
Score = 77.4 bits (189), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 99/214 (46%), Gaps = 15/214 (7%)
Query: 10 ITHVIFDMDGLLLDTEKFYTEVQELILARYNKTFDWSLKAKMMGKKAIEAAQVFVEETGI 69
I +IFD DGL+LDTE EV + I + S+ K++G A ++EE I
Sbjct: 2 IKALIFDFDGLILDTETHEYEVLQEIFEEHGSVLPLSVWGKVIGTAAGFRPFEYLEEQ-I 60
Query: 70 SDKLSAEDFLVQREETLQTLFPTSELMPGASHLIRHLHAKGIPMCVATGS----LARHFE 125
KL+ E+ R E + + PG + G+ + +A+ S ++ H
Sbjct: 61 GKKLNHEELTQLRRERFAKRMESEKARPGVEAYLNAAKDLGLKIGLASSSDYKWVSGHL- 119
Query: 126 LKTQKHRELFSLMHHVVRGDDPEVKQGKPSPDIFLAAAKRFEGGPIDSQEILVFEDAPSG 185
K LF + DD V++ KP+P+++L AAK P E L FED+ +G
Sbjct: 120 ----KQIGLFDDFEVIQTADD--VEEVKPNPELYLLAAKNLGVSP---AECLAFEDSVNG 170
Query: 186 VLAAKNAGMSVVMVPDPRLDSSYHSNADQLLSSL 219
+AAK AGM V+VP+ + + D L S+
Sbjct: 171 SIAAKRAGMKCVIVPNKVTGTLMFEDYDHRLESM 204
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Bacillus subtilis (strain 168) (taxid: 224308) |
| >sp|P44004|Y488_HAEIN Uncharacterized protein HI_0488 OS=Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd) GN=HI_0488 PE=3 SV=1 | Back alignment and function description |
|---|
Score = 68.2 bits (165), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 55/191 (28%), Positives = 91/191 (47%), Gaps = 12/191 (6%)
Query: 8 KPITHVIFDMDGLLLDTEKFYTEVQELILARYNKTFDWSLKAKMMGKKAIEAAQVFVEET 67
P +IFDMDG L+DT + + ++ ++ FD+ + G A ++
Sbjct: 8 NPYEGLIFDMDGTLIDTMPVHAQAWTMVGKKFGYEFDFQIMYNFGGATVRTIAGEMMKAA 67
Query: 68 GIS-DKLSAEDFLVQREETLQTLFPT-SELMPGASHLIRHLHAKGIPMCVATGSLARHFE 125
+ D++ ED L + E L PT S+L+P +++ H K P+ + +GS + +
Sbjct: 68 NMPLDRI--EDVLAAKRELSYQLIPTQSKLLP-TFEIVKSFHQKK-PIALGSGSHRKIID 123
Query: 126 LKTQKHRELFSLMHHVVRGDDPEVKQGKPSPDIFLAAAKRFEGGPIDSQEILVFEDAPSG 185
+ K + + +V DD VK+ KP P+ FL A+ + P +VFEDA G
Sbjct: 124 MLMDK-LAIAPYFNAIVSADD--VKEHKPHPETFLRCAELIQANP---SRCIVFEDADLG 177
Query: 186 VLAAKNAGMSV 196
V A +AGM V
Sbjct: 178 VQAGLSAGMDV 188
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Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd) (taxid: 71421) |
| >sp|P77475|YQAB_ECOLI Fructose-1-phosphate phosphatase YqaB OS=Escherichia coli (strain K12) GN=yqaB PE=1 SV=1 | Back alignment and function description |
|---|
Score = 67.0 bits (162), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/190 (31%), Positives = 86/190 (45%), Gaps = 15/190 (7%)
Query: 13 VIFDMDGLLLDTEKFYTEVQELILARYNKTFDWSLKAKMMGKKAIEAAQVFVEETGISDK 72
+IFDMDG +LDTE + + +L Y +D + G AQ +E ++
Sbjct: 8 LIFDMDGTILDTEPTHRKAWREVLGHYGLQYDIQAMIALNGSPTWRIAQAIIE----LNQ 63
Query: 73 LSAEDFLVQREET---LQTLFPTSELMPGASHLIRHLHAKGIPMCVATGSLARHFELKTQ 129
+ + RE+T L + E +P +++ H + PM V TGS + E
Sbjct: 64 ADLDPHALAREKTEAVRSMLLDSVEPLPLVD-VVKSWHGRR-PMAVGTGSESAIAE-ALL 120
Query: 130 KHRELFSLMHHVVRGDDPEVKQGKPSPDIFLAAAKRFEGGPIDSQEILVFEDAPSGVLAA 189
H L VV D VK KP+PD FL A+R P + +VFEDA G+ AA
Sbjct: 121 AHLGLRHYFDAVVAAD--HVKHHKPAPDTFLLCAQRMGVQPT---QCVVFEDADFGIQAA 175
Query: 190 KNAGMSVVMV 199
+ AGM V V
Sbjct: 176 RAAGMDAVDV 185
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Catalyzes strongly the dephosphorylation of fructose-1-phosphate (Fru1P) and slightly the dephosphorylation of 6-phosphogluconate (6P-Glu). It has low beta-phosphoglucomutase activity. Escherichia coli (strain K12) (taxid: 83333) EC: 3 EC: . EC: 1 EC: . EC: 3 EC: . EC: - |
Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 237 | ||||||
| 297735400 | 234 | unnamed protein product [Vitis vinifera] | 0.974 | 0.987 | 0.835 | 1e-110 | |
| 225446040 | 264 | PREDICTED: pseudouridine-5'-monophosphat | 0.978 | 0.878 | 0.831 | 1e-110 | |
| 388519215 | 242 | unknown [Lotus japonicus] | 0.983 | 0.962 | 0.815 | 1e-109 | |
| 224143727 | 237 | predicted protein [Populus trichocarpa] | 0.983 | 0.983 | 0.819 | 1e-109 | |
| 297796643 | 239 | glycerol-3-phosphatase 2 [Arabidopsis ly | 0.987 | 0.979 | 0.769 | 1e-107 | |
| 363814510 | 241 | uncharacterized protein LOC100786174 [Gl | 0.983 | 0.966 | 0.789 | 1e-106 | |
| 217071946 | 241 | unknown [Medicago truncatula] | 0.995 | 0.979 | 0.775 | 1e-106 | |
| 18423981 | 240 | haloacid dehalogenase-like hydrolase dom | 0.987 | 0.975 | 0.769 | 1e-106 | |
| 357479663 | 301 | Haloacid dehalogenase-like hydrolase dom | 0.995 | 0.784 | 0.775 | 1e-106 | |
| 449457163 | 285 | PREDICTED: pseudouridine-5'-monophosphat | 0.978 | 0.814 | 0.797 | 1e-106 |
| >gi|297735400|emb|CBI17840.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 403 bits (1036), Expect = e-110, Method: Compositional matrix adjust.
Identities = 193/231 (83%), Positives = 210/231 (90%)
Query: 4 VSSKKPITHVIFDMDGLLLDTEKFYTEVQELILARYNKTFDWSLKAKMMGKKAIEAAQVF 63
++ K I+HVIFDMDGLLLDTEKFYTEVQE+ILARYNKTFDWSLKAKMMGKKAIEAA+VF
Sbjct: 1 MAPKTSISHVIFDMDGLLLDTEKFYTEVQEIILARYNKTFDWSLKAKMMGKKAIEAARVF 60
Query: 64 VEETGISDKLSAEDFLVQREETLQTLFPTSELMPGASHLIRHLHAKGIPMCVATGSLARH 123
VEETGISD LSAEDFLV+REE L+ LFPTSELMPGAS L++HLHA GIP+CVATGS RH
Sbjct: 61 VEETGISDSLSAEDFLVEREEMLRKLFPTSELMPGASRLVKHLHASGIPICVATGSHRRH 120
Query: 124 FELKTQKHRELFSLMHHVVRGDDPEVKQGKPSPDIFLAAAKRFEGGPIDSQEILVFEDAP 183
FELKTQ+H E+FSLMHHVV GDDPEVKQGKPSPDIFLAAA+RFEGGP+DSQ+ILVFEDAP
Sbjct: 121 FELKTQRHGEVFSLMHHVVLGDDPEVKQGKPSPDIFLAAARRFEGGPVDSQKILVFEDAP 180
Query: 184 SGVLAAKNAGMSVVMVPDPRLDSSYHSNADQLLSSLLGFNPKDWGLPPFED 234
SGV AAKNAGM VMVPDPRLD S+H ADQ+LSSLL FNP DWGLPPF D
Sbjct: 181 SGVGAAKNAGMYAVMVPDPRLDISFHEAADQVLSSLLDFNPNDWGLPPFPD 231
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225446040|ref|XP_002270586.1| PREDICTED: pseudouridine-5'-monophosphatase-like [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 403 bits (1035), Expect = e-110, Method: Compositional matrix adjust.
Identities = 193/232 (83%), Positives = 211/232 (90%)
Query: 3 AVSSKKPITHVIFDMDGLLLDTEKFYTEVQELILARYNKTFDWSLKAKMMGKKAIEAAQV 62
+++ K I+HVIFDMDGLLLDTEKFYTEVQE+ILARYNKTFDWSLKAKMMGKKAIEAA+V
Sbjct: 30 SMAPKTSISHVIFDMDGLLLDTEKFYTEVQEIILARYNKTFDWSLKAKMMGKKAIEAARV 89
Query: 63 FVEETGISDKLSAEDFLVQREETLQTLFPTSELMPGASHLIRHLHAKGIPMCVATGSLAR 122
FVEETGISD LSAEDFLV+REE L+ LFPTSELMPGAS L++HLHA GIP+CVATGS R
Sbjct: 90 FVEETGISDSLSAEDFLVEREEMLRKLFPTSELMPGASRLVKHLHASGIPICVATGSHRR 149
Query: 123 HFELKTQKHRELFSLMHHVVRGDDPEVKQGKPSPDIFLAAAKRFEGGPIDSQEILVFEDA 182
HFELKTQ+H E+FSLMHHVV GDDPEVKQGKPSPDIFLAAA+RFEGGP+DSQ+ILVFEDA
Sbjct: 150 HFELKTQRHGEVFSLMHHVVLGDDPEVKQGKPSPDIFLAAARRFEGGPVDSQKILVFEDA 209
Query: 183 PSGVLAAKNAGMSVVMVPDPRLDSSYHSNADQLLSSLLGFNPKDWGLPPFED 234
PSGV AAKNAGM VMVPDPRLD S+H ADQ+LSSLL FNP DWGLPPF D
Sbjct: 210 PSGVGAAKNAGMYAVMVPDPRLDISFHEAADQVLSSLLDFNPNDWGLPPFPD 261
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|388519215|gb|AFK47669.1| unknown [Lotus japonicus] | Back alignment and taxonomy information |
|---|
Score = 400 bits (1027), Expect = e-109, Method: Compositional matrix adjust.
Identities = 190/233 (81%), Positives = 213/233 (91%)
Query: 2 AAVSSKKPITHVIFDMDGLLLDTEKFYTEVQELILARYNKTFDWSLKAKMMGKKAIEAAQ 61
AAVS++ PITHV+FDMDGLLLDTEKFYTEVQELILARYNKTFDWSLKAKMMG KAIEAA+
Sbjct: 7 AAVSARTPITHVVFDMDGLLLDTEKFYTEVQELILARYNKTFDWSLKAKMMGNKAIEAAR 66
Query: 62 VFVEETGISDKLSAEDFLVQREETLQTLFPTSELMPGASHLIRHLHAKGIPMCVATGSLA 121
VFVEETGISD LSAE FLV+RE+TL LFPTS+LMPGAS L++HLHAKG+P+ +ATGSL
Sbjct: 67 VFVEETGISDSLSAEQFLVEREDTLLKLFPTSDLMPGASRLLKHLHAKGVPIALATGSLR 126
Query: 122 RHFELKTQKHRELFSLMHHVVRGDDPEVKQGKPSPDIFLAAAKRFEGGPIDSQEILVFED 181
+HFELKTQ+H ELFSLMHHVV GDDPEVK GKPSPD+FLAAAKRFEGGP+D ++LVFED
Sbjct: 127 KHFELKTQRHGELFSLMHHVVVGDDPEVKHGKPSPDVFLAAAKRFEGGPVDPCKVLVFED 186
Query: 182 APSGVLAAKNAGMSVVMVPDPRLDSSYHSNADQLLSSLLGFNPKDWGLPPFED 234
AP+GVLAAKNAGMSVVMVPD RLD S H+ ADQ+L+SLL FNP +WGLPPFED
Sbjct: 187 APAGVLAAKNAGMSVVMVPDARLDKSLHAEADQVLNSLLDFNPCEWGLPPFED 239
|
Source: Lotus japonicus Species: Lotus japonicus Genus: Lotus Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224143727|ref|XP_002325054.1| predicted protein [Populus trichocarpa] gi|222866488|gb|EEF03619.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 399 bits (1026), Expect = e-109, Method: Compositional matrix adjust.
Identities = 191/233 (81%), Positives = 209/233 (89%)
Query: 1 MAAVSSKKPITHVIFDMDGLLLDTEKFYTEVQELILARYNKTFDWSLKAKMMGKKAIEAA 60
M+ S K PITHVIFDMDGLLLDTEKFYTEVQE+ILARYNK FDWSLKAKMMGKKAIE+A
Sbjct: 1 MSNPSEKGPITHVIFDMDGLLLDTEKFYTEVQEIILARYNKAFDWSLKAKMMGKKAIESA 60
Query: 61 QVFVEETGISDKLSAEDFLVQREETLQTLFPTSELMPGASHLIRHLHAKGIPMCVATGSL 120
++FVEETGISD LSAEDFLV+RE LQ+LFPTS+LMPGAS LIRHLHAKGIP+ VATGS
Sbjct: 61 RIFVEETGISDSLSAEDFLVEREAMLQSLFPTSDLMPGASRLIRHLHAKGIPIAVATGSH 120
Query: 121 ARHFELKTQKHRELFSLMHHVVRGDDPEVKQGKPSPDIFLAAAKRFEGGPIDSQEILVFE 180
RHF LKTQ+H ELFSLMHH+V GDDPEVKQGKPSPD+FLAAA+RFEGGP+D +ILVFE
Sbjct: 121 KRHFGLKTQRHSELFSLMHHIVLGDDPEVKQGKPSPDVFLAAARRFEGGPVDPMKILVFE 180
Query: 181 DAPSGVLAAKNAGMSVVMVPDPRLDSSYHSNADQLLSSLLGFNPKDWGLPPFE 233
DAP+GVLAAK AGMS VMVPDPRLDSS+H ADQ+LSSLL FNP WGLPPFE
Sbjct: 181 DAPAGVLAAKTAGMSAVMVPDPRLDSSHHETADQVLSSLLDFNPSYWGLPPFE 233
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|297796643|ref|XP_002866206.1| glycerol-3-phosphatase 2 [Arabidopsis lyrata subsp. lyrata] gi|297312041|gb|EFH42465.1| glycerol-3-phosphatase 2 [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
|---|
Score = 392 bits (1006), Expect = e-107, Method: Compositional matrix adjust.
Identities = 180/234 (76%), Positives = 213/234 (91%)
Query: 2 AAVSSKKPITHVIFDMDGLLLDTEKFYTEVQELILARYNKTFDWSLKAKMMGKKAIEAAQ 61
AAV+ + ITHVIFDMDGLLL TEKFYTEVQE+ILAR+NK FDWSLKAKMMG+KAIEAA+
Sbjct: 5 AAVAGRGSITHVIFDMDGLLLGTEKFYTEVQEIILARFNKKFDWSLKAKMMGRKAIEAAR 64
Query: 62 VFVEETGISDKLSAEDFLVQREETLQTLFPTSELMPGASHLIRHLHAKGIPMCVATGSLA 121
+FVE++GISD LSAEDFLV+RE LQ LFPTSELMPGAS LI+HLH+K IP+C+ATG+
Sbjct: 65 IFVEDSGISDSLSAEDFLVERESMLQDLFPTSELMPGASRLIKHLHSKNIPICIATGTHT 124
Query: 122 RHFELKTQKHRELFSLMHHVVRGDDPEVKQGKPSPDIFLAAAKRFEGGPIDSQEILVFED 181
RH++LKTQ+HRELFSLMHH+VRGDDPEVKQGKP+PD FLAAA+RF+ GP+DSQ++LVFED
Sbjct: 125 RHYDLKTQRHRELFSLMHHIVRGDDPEVKQGKPAPDGFLAAARRFKDGPVDSQKVLVFED 184
Query: 182 APSGVLAAKNAGMSVVMVPDPRLDSSYHSNADQLLSSLLGFNPKDWGLPPFEDA 235
APSGVLAAKNAGM+VVMVPDPRLD +Y ADQ+++SLL F P++WGLPPFED+
Sbjct: 185 APSGVLAAKNAGMNVVMVPDPRLDITYQDVADQIITSLLDFKPEEWGLPPFEDS 238
|
Source: Arabidopsis lyrata subsp. lyrata Species: Arabidopsis lyrata Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|363814510|ref|NP_001242890.1| uncharacterized protein LOC100786174 [Glycine max] gi|255641845|gb|ACU21191.1| unknown [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 390 bits (1003), Expect = e-106, Method: Compositional matrix adjust.
Identities = 184/233 (78%), Positives = 208/233 (89%)
Query: 2 AAVSSKKPITHVIFDMDGLLLDTEKFYTEVQELILARYNKTFDWSLKAKMMGKKAIEAAQ 61
A VS ++PITHV+FDMDGLLLDTE+FYT+VQE+ILARYNKTFDWSLKAKMMGKKAIE+A+
Sbjct: 6 AVVSVRRPITHVVFDMDGLLLDTERFYTQVQEIILARYNKTFDWSLKAKMMGKKAIESAR 65
Query: 62 VFVEETGISDKLSAEDFLVQREETLQTLFPTSELMPGASHLIRHLHAKGIPMCVATGSLA 121
+FVEETGISD LSAE FLV+RE+ L+ LFPTSE MPGAS L+ HLHAKG+P+CV TGS
Sbjct: 66 IFVEETGISDSLSAEQFLVEREDMLEKLFPTSEPMPGASRLVNHLHAKGVPVCVVTGSHK 125
Query: 122 RHFELKTQKHRELFSLMHHVVRGDDPEVKQGKPSPDIFLAAAKRFEGGPIDSQEILVFED 181
RHFELKTQ+H E+FSLMHHVV GDDPEVKQGKPSPD FLAAAKRFEGGP+D ILVFED
Sbjct: 126 RHFELKTQRHHEIFSLMHHVVLGDDPEVKQGKPSPDGFLAAAKRFEGGPVDPSNILVFED 185
Query: 182 APSGVLAAKNAGMSVVMVPDPRLDSSYHSNADQLLSSLLGFNPKDWGLPPFED 234
AP+GVLAAKNAGMSVVMVPDPRLD S+ ADQ+L+SLL FNP + GLPPF+D
Sbjct: 186 APAGVLAAKNAGMSVVMVPDPRLDKSFLDTADQVLNSLLDFNPSEGGLPPFDD 238
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|217071946|gb|ACJ84333.1| unknown [Medicago truncatula] | Back alignment and taxonomy information |
|---|
Score = 390 bits (1002), Expect = e-106, Method: Compositional matrix adjust.
Identities = 183/236 (77%), Positives = 209/236 (88%)
Query: 2 AAVSSKKPITHVIFDMDGLLLDTEKFYTEVQELILARYNKTFDWSLKAKMMGKKAIEAAQ 61
++V +KPITHV+FDMDGLLLDTEKFYTEVQE+ILARYNKTF+W LKAKMMG KAIEAA+
Sbjct: 6 SSVGVRKPITHVVFDMDGLLLDTEKFYTEVQEIILARYNKTFEWPLKAKMMGMKAIEAAK 65
Query: 62 VFVEETGISDKLSAEDFLVQREETLQTLFPTSELMPGASHLIRHLHAKGIPMCVATGSLA 121
VFVEETGISD LSA+ FLV+RE+ L++LFPTSELMPG S L++HLHAKG+P+ VATGS
Sbjct: 66 VFVEETGISDSLSADQFLVEREDMLRSLFPTSELMPGVSRLLKHLHAKGVPIAVATGSHK 125
Query: 122 RHFELKTQKHRELFSLMHHVVRGDDPEVKQGKPSPDIFLAAAKRFEGGPIDSQEILVFED 181
RHFELKTQ+H E+FSLMHHVV GDDPEVKQGKPSPD+FLAAA+RFEGGP+D ILVFED
Sbjct: 126 RHFELKTQRHGEMFSLMHHVVLGDDPEVKQGKPSPDVFLAAARRFEGGPVDPSNILVFED 185
Query: 182 APSGVLAAKNAGMSVVMVPDPRLDSSYHSNADQLLSSLLGFNPKDWGLPPFEDALN 237
APSGV AAKNAGMSVVM+PDPRLD S+ ADQ+L+SLL FNP +W LPPFED N
Sbjct: 186 APSGVRAAKNAGMSVVMIPDPRLDKSFQDAADQVLNSLLDFNPSEWSLPPFEDNGN 241
|
Source: Medicago truncatula Species: Medicago truncatula Genus: Medicago Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|18423981|ref|NP_568858.1| haloacid dehalogenase-like hydrolase domain-containing protein [Arabidopsis thaliana] gi|17381022|gb|AAL36323.1| putative GS1 protein [Arabidopsis thaliana] gi|21281161|gb|AAM45079.1| putative GS1 protein [Arabidopsis thaliana] gi|21536767|gb|AAM61099.1| GS1-like protein [Arabidopsis thaliana] gi|332009519|gb|AED96902.1| haloacid dehalogenase-like hydrolase domain-containing protein [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Score = 390 bits (1001), Expect = e-106, Method: Compositional matrix adjust.
Identities = 180/234 (76%), Positives = 211/234 (90%)
Query: 2 AAVSSKKPITHVIFDMDGLLLDTEKFYTEVQELILARYNKTFDWSLKAKMMGKKAIEAAQ 61
A + + ITHVIFDMDGLLLDTEKFYTEVQE+ILAR+NK FDWSLKAKMMG+KAIEAA+
Sbjct: 6 AVTAGRGSITHVIFDMDGLLLDTEKFYTEVQEIILARFNKKFDWSLKAKMMGRKAIEAAR 65
Query: 62 VFVEETGISDKLSAEDFLVQREETLQTLFPTSELMPGASHLIRHLHAKGIPMCVATGSLA 121
+FVEE+GISD LSAEDFLV+RE LQ LFPTSELMPGAS LI+HLH K IP+C+ATG+
Sbjct: 66 IFVEESGISDSLSAEDFLVERESMLQDLFPTSELMPGASRLIKHLHVKNIPICIATGTHT 125
Query: 122 RHFELKTQKHRELFSLMHHVVRGDDPEVKQGKPSPDIFLAAAKRFEGGPIDSQEILVFED 181
RH++LKTQ+HRELFSLMHHVVRGDDPEVKQGKP+PD FLAAA+RF+ GP+DSQ++LVFED
Sbjct: 126 RHYDLKTQRHRELFSLMHHVVRGDDPEVKQGKPAPDGFLAAARRFKDGPVDSQKVLVFED 185
Query: 182 APSGVLAAKNAGMSVVMVPDPRLDSSYHSNADQLLSSLLGFNPKDWGLPPFEDA 235
APSGVLAAKNAGM+VVMVPDPRLD S+ ADQ+++SL+ F P++WGLPPFED+
Sbjct: 186 APSGVLAAKNAGMNVVMVPDPRLDISHQDVADQIITSLVDFKPEEWGLPPFEDS 239
|
Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|357479663|ref|XP_003610117.1| Haloacid dehalogenase-like hydrolase domain-containing protein 1A [Medicago truncatula] gi|355511172|gb|AES92314.1| Haloacid dehalogenase-like hydrolase domain-containing protein 1A [Medicago truncatula] | Back alignment and taxonomy information |
|---|
Score = 389 bits (1000), Expect = e-106, Method: Compositional matrix adjust.
Identities = 183/236 (77%), Positives = 209/236 (88%)
Query: 2 AAVSSKKPITHVIFDMDGLLLDTEKFYTEVQELILARYNKTFDWSLKAKMMGKKAIEAAQ 61
++V +KPITHV+FDMDGLLLDTEKFYTEVQE+ILARYNKTF+W LKAKMMG KAIEAA+
Sbjct: 66 SSVGVRKPITHVVFDMDGLLLDTEKFYTEVQEIILARYNKTFEWPLKAKMMGMKAIEAAK 125
Query: 62 VFVEETGISDKLSAEDFLVQREETLQTLFPTSELMPGASHLIRHLHAKGIPMCVATGSLA 121
VFVEETGISD LSA+ FLV+RE+ L++LFPTSELMPG S L++HLHAKG+P+ VATGS
Sbjct: 126 VFVEETGISDSLSADQFLVEREDMLRSLFPTSELMPGVSRLLKHLHAKGVPIAVATGSHK 185
Query: 122 RHFELKTQKHRELFSLMHHVVRGDDPEVKQGKPSPDIFLAAAKRFEGGPIDSQEILVFED 181
RHFELKTQ+H E+FSLMHHVV GDDPEVKQGKPSPD+FLAAA+RFEGGP+D ILVFED
Sbjct: 186 RHFELKTQRHGEMFSLMHHVVLGDDPEVKQGKPSPDVFLAAARRFEGGPVDPSNILVFED 245
Query: 182 APSGVLAAKNAGMSVVMVPDPRLDSSYHSNADQLLSSLLGFNPKDWGLPPFEDALN 237
APSGV AAKNAGMSVVM+PDPRLD S+ ADQ+L+SLL FNP +W LPPFED N
Sbjct: 246 APSGVRAAKNAGMSVVMIPDPRLDKSFQDAADQVLNSLLDFNPSEWSLPPFEDNGN 301
|
Source: Medicago truncatula Species: Medicago truncatula Genus: Medicago Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449457163|ref|XP_004146318.1| PREDICTED: pseudouridine-5'-monophosphatase-like [Cucumis sativus] gi|449517331|ref|XP_004165699.1| PREDICTED: pseudouridine-5'-monophosphatase-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 388 bits (997), Expect = e-106, Method: Compositional matrix adjust.
Identities = 185/232 (79%), Positives = 207/232 (89%)
Query: 4 VSSKKPITHVIFDMDGLLLDTEKFYTEVQELILARYNKTFDWSLKAKMMGKKAIEAAQVF 63
SS+ ITHVIFDMDGLLLDTE FYTEVQE ILARY+KTFDWSLKAKMMG+KAIEAA+VF
Sbjct: 52 TSSEGSITHVIFDMDGLLLDTEGFYTEVQEKILARYDKTFDWSLKAKMMGRKAIEAARVF 111
Query: 64 VEETGISDKLSAEDFLVQREETLQTLFPTSELMPGASHLIRHLHAKGIPMCVATGSLARH 123
VEE+GISD LS EDFLV+RE+ L++LFP SELMPGAS LIRHLHAKG+P +ATGS RH
Sbjct: 112 VEESGISDSLSPEDFLVEREDMLRSLFPQSELMPGASRLIRHLHAKGVPFGLATGSHRRH 171
Query: 124 FELKTQKHRELFSLMHHVVRGDDPEVKQGKPSPDIFLAAAKRFEGGPIDSQEILVFEDAP 183
FELKTQ+H ELF LMHH+V GDDPEVKQGKPSPDIFLAAAKRF P+D++ LVFEDAP
Sbjct: 172 FELKTQRHGELFKLMHHIVLGDDPEVKQGKPSPDIFLAAAKRFADAPVDAERTLVFEDAP 231
Query: 184 SGVLAAKNAGMSVVMVPDPRLDSSYHSNADQLLSSLLGFNPKDWGLPPFEDA 235
SGVLAAKNAGM V+MVPDPRLDSS+H NA+Q+LSSLL FNPK+WGLPPFED+
Sbjct: 232 SGVLAAKNAGMKVIMVPDPRLDSSHHGNANQVLSSLLDFNPKEWGLPPFEDS 283
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 237 | ||||||
| TAIR|locus:2174567 | 240 | GS1 [Arabidopsis thaliana (tax | 0.987 | 0.975 | 0.769 | 5.8e-98 | |
| TAIR|locus:2117512 | 298 | GPP1 "glycerol-3-phosphatase 1 | 0.962 | 0.765 | 0.771 | 1.6e-95 | |
| UNIPROTKB|Q2KJ86 | 231 | HDHD1A "Haloacid dehalogenase- | 0.970 | 0.995 | 0.508 | 3.3e-56 | |
| ZFIN|ZDB-GENE-050522-36 | 226 | hdhd1 "haloacid dehalogenase-l | 0.945 | 0.991 | 0.484 | 1.8e-55 | |
| UNIPROTKB|Q08623 | 228 | HDHD1 "Pseudouridine-5'-monoph | 0.940 | 0.978 | 0.504 | 2.3e-55 | |
| FB|FBgn0019982 | 231 | Gs1l "GS1-like" [Drosophila me | 0.945 | 0.969 | 0.5 | 1.3e-52 | |
| RGD|1305101 | 234 | Hdhd1 "haloacid dehalogenase-l | 0.962 | 0.974 | 0.467 | 3.1e-51 | |
| UNIPROTKB|E2R8L4 | 233 | HDHD1 "Uncharacterized protein | 0.932 | 0.948 | 0.482 | 6.5e-51 | |
| MGI|MGI:1914615 | 234 | Hdhd1a "haloacid dehalogenase- | 0.945 | 0.957 | 0.475 | 4.6e-50 | |
| UNIPROTKB|E1BRK1 | 214 | HDHD1 "Uncharacterized protein | 0.902 | 1.0 | 0.465 | 1.8e-48 |
| TAIR|locus:2174567 GS1 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 973 (347.6 bits), Expect = 5.8e-98, P = 5.8e-98
Identities = 180/234 (76%), Positives = 211/234 (90%)
Query: 2 AAVSSKKPITHVIFDMDGLLLDTEKFYTEVQELILARYNKTFDWSLKAKMMGKKAIEAAQ 61
A + + ITHVIFDMDGLLLDTEKFYTEVQE+ILAR+NK FDWSLKAKMMG+KAIEAA+
Sbjct: 6 AVTAGRGSITHVIFDMDGLLLDTEKFYTEVQEIILARFNKKFDWSLKAKMMGRKAIEAAR 65
Query: 62 VFVEETGISDKLSAEDFLVQREETLQTLFPTSELMPGASHLIRHLHAKGIPMCVATGSLA 121
+FVEE+GISD LSAEDFLV+RE LQ LFPTSELMPGAS LI+HLH K IP+C+ATG+
Sbjct: 66 IFVEESGISDSLSAEDFLVERESMLQDLFPTSELMPGASRLIKHLHVKNIPICIATGTHT 125
Query: 122 RHFELKTQKHRELFSLMHHVVRGDDPEVKQGKPSPDIFLAAAKRFEGGPIDSQEILVFED 181
RH++LKTQ+HRELFSLMHHVVRGDDPEVKQGKP+PD FLAAA+RF+ GP+DSQ++LVFED
Sbjct: 126 RHYDLKTQRHRELFSLMHHVVRGDDPEVKQGKPAPDGFLAAARRFKDGPVDSQKVLVFED 185
Query: 182 APSGVLAAKNAGMSVVMVPDPRLDSSYHSNADQLLSSLLGFNPKDWGLPPFEDA 235
APSGVLAAKNAGM+VVMVPDPRLD S+ ADQ+++SL+ F P++WGLPPFED+
Sbjct: 186 APSGVLAAKNAGMNVVMVPDPRLDISHQDVADQIITSLVDFKPEEWGLPPFEDS 239
|
|
| TAIR|locus:2117512 GPP1 "glycerol-3-phosphatase 1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 950 (339.5 bits), Expect = 1.6e-95, P = 1.6e-95
Identities = 176/228 (77%), Positives = 207/228 (90%)
Query: 10 ITHVIFDMDGLLLDTEKFYTEVQELILARYNKTFDWSLKAKMMGKKAIEAAQVFVEETGI 69
ITHVIFDMDGLLLDTEKFYTEVQE ILARYNKTFDWSLKAKMMG+KAIEAA++FV+E+GI
Sbjct: 71 ITHVIFDMDGLLLDTEKFYTEVQEKILARYNKTFDWSLKAKMMGRKAIEAARLFVDESGI 130
Query: 70 SDKLSAEDFLVQREETLQTLFPTSELMPGASHLIRHLHAKGIPMCVATGSLARHFELKTQ 129
SD LSAEDF+V+RE LQ LFPTS+LMPGAS L+RHLH KGIP+C+ATG+ RHF+LKTQ
Sbjct: 131 SDSLSAEDFIVERESMLQDLFPTSDLMPGASRLLRHLHGKGIPICIATGTHTRHFDLKTQ 190
Query: 130 KHRELFSLMHHVVRGDDPEVKQGKPSPDIFLAAAKRFEGGPIDSQEILVFEDAPSGVLAA 189
+HRELFSLMHHVVRGDDPEVK+GKP+PD FLAA++RFE GP+D +++LVFEDAPSGV AA
Sbjct: 191 RHRELFSLMHHVVRGDDPEVKEGKPAPDGFLAASRRFEDGPVDPRKVLVFEDAPSGVQAA 250
Query: 190 KNAGMSVVMVPDPRLDSSYHSNADQLLSSLLGFNPKDWGLPPFEDALN 237
KNAGM+V+MVPD RLD SY + ADQ+L+SLL F P++WGLP F+D+ N
Sbjct: 251 KNAGMNVIMVPDSRLDKSYCNVADQVLASLLDFKPEEWGLPSFQDSHN 298
|
|
| UNIPROTKB|Q2KJ86 HDHD1A "Haloacid dehalogenase-like hydrolase domain containing 1A" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
|---|
Score = 579 (208.9 bits), Expect = 3.3e-56, P = 3.3e-56
Identities = 119/234 (50%), Positives = 156/234 (66%)
Query: 1 MAA-VSSKKPITHVIFDMDGLLLDTEKFYTEVQELILARYNKTFDWSLKAKMMGKKAIEA 59
MAA V +P+TH++FDMDGLLLDTE+ Y+ V E I RY K + W +K+ +MGKKA+EA
Sbjct: 1 MAAPVPLPRPVTHLLFDMDGLLLDTERLYSAVFEDICGRYGKKYSWDVKSLVMGKKALEA 60
Query: 60 AQVFVEETGISDKLSAEDFLVQREETLQTLFPTSELMPGASHLIRHLHAKGIPMCVATGS 119
AQ+ + +T + +SAE+ + + L+ +FPT+ LMPG LIRHL +P VAT S
Sbjct: 61 AQL-IRDT-LQLPMSAEELVEVSQAKLKEVFPTAALMPGVEKLIRHLRKHDVPCAVATSS 118
Query: 120 LARHFELKTQKHRELFSLMHHVVRGDDPEVKQGKPSPDIFLAAAKRFEGGPIDSQEILVF 179
F+LKT +H++ F L HHVV GDDPEV+ GKP PDIFL A+RF P + + LVF
Sbjct: 119 GTASFQLKTSRHQDFFGLFHHVVLGDDPEVRSGKPEPDIFLTCARRFSPAP-PANKCLVF 177
Query: 180 EDAPSGVLAAKNAGMSVVMVPDPRLDSSYHSNADQLLSSLLGFNPKDWGLPPFE 233
EDAP+GV AA AGM VVMVPD L S A +L SL F P+ +GLPP++
Sbjct: 178 EDAPNGVEAALAAGMQVVMVPDGNLKPDLTSKATLVLGSLQDFQPELFGLPPYD 231
|
|
| ZFIN|ZDB-GENE-050522-36 hdhd1 "haloacid dehalogenase-like hydrolase domain containing 1" [Danio rerio (taxid:7955)] | Back alignment and assigned GO terms |
|---|
Score = 572 (206.4 bits), Expect = 1.8e-55, P = 1.8e-55
Identities = 110/227 (48%), Positives = 151/227 (66%)
Query: 6 SKKPITHVIFDMDGLLLDTEKFYTEVQELILARYNKTFDWSLKAKMMGKKAIEAAQVFVE 65
S KP+THV+FDMDGLLLDTE+ YT + + R+NK + W +K+ +MGKKA++AA++ +
Sbjct: 2 SYKPVTHVLFDMDGLLLDTERLYTVSFQEVCDRFNKQYTWEVKSSVMGKKALDAARIIRD 61
Query: 66 ETGISDKLSAEDFLVQREETLQTLFPTSELMPGASHLIRHLHAKGIPMCVATGSLARHFE 125
+ G+ ++ E+ L + + + LFPT+ L+PG L+ HLH GIP+ V T S FE
Sbjct: 62 KIGLP--MTPEELLEETRKIQERLFPTTSLLPGVEKLVNHLHKHGIPIAVGTSSAGLTFE 119
Query: 126 LKTQKHRELFSLMHHVVRGDDPEVKQGKPSPDIFLAAAKRFEGGPIDSQEILVFEDAPSG 185
+KT +H+E FSL H+V GDDP+VK GKP PD FL AKRF P + ++ LVFEDAP+G
Sbjct: 120 MKTSRHKEFFSLFSHIVLGDDPDVKNGKPLPDTFLVCAKRFSP-PANPKQCLVFEDAPNG 178
Query: 186 VLAAKNAGMSVVMVPDPRLDSSYHSNADQLLSSLLGFNPKDWGLPPF 232
V A AGM VVM+PD LD S A LL S+ F P+ +GLP +
Sbjct: 179 VKAGLAAGMQVVMIPDDNLDRSLTQEATLLLRSMEDFRPELFGLPAY 225
|
|
| UNIPROTKB|Q08623 HDHD1 "Pseudouridine-5'-monophosphatase" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
Score = 571 (206.1 bits), Expect = 2.3e-55, P = 2.3e-55
Identities = 114/226 (50%), Positives = 155/226 (68%)
Query: 8 KPITHVIFDMDGLLLDTEKFYTEVQELILARYNKTFDWSLKAKMMGKKAIEAAQVFVEET 67
+P+TH+IFDMDGLLLDTE+ Y+ V + I RY+K + W +K+ +MGKKA+EAAQ+ ++
Sbjct: 6 QPVTHLIFDMDGLLLDTERLYSVVFQEICNRYDKKYSWDVKSLVMGKKALEAAQIIIDVL 65
Query: 68 GISDKLSAEDFLVQREETLQTLFPTSELMPGASHLIRHLHAKGIPMCVATGSLARHFELK 127
+ +S E+ + + + L+ +FPT+ LMPGA LI HL GIP +AT S + F++K
Sbjct: 66 QLP--MSKEELVEESQTKLKEVFPTAALMPGAEKLIIHLRKHGIPFALATSSGSASFDMK 123
Query: 128 TQKHRELFSLMHHVVRGDDPEVKQGKPSPDIFLAAAKRFEGGPIDSQEILVFEDAPSGVL 187
T +H+E FSL H+V GDDPEV+ GKP PDIFLA AKRF P ++ LVFEDAP+GV
Sbjct: 124 TSRHKEFFSLFSHIVLGDDPEVQHGKPDPDIFLACAKRFSPPPA-MEKCLVFEDAPNGVE 182
Query: 188 AAKNAGMSVVMVPDPRLDSSYHSNADQLLSSLLGFNPKDWGLPPFE 233
AA AGM VVMVPD L + A +L+SL F P+ +GLP +E
Sbjct: 183 AALAAGMQVVMVPDGNLSRDLTTKATLVLNSLQDFQPELFGLPSYE 228
|
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| FB|FBgn0019982 Gs1l "GS1-like" [Drosophila melanogaster (taxid:7227)] | Back alignment and assigned GO terms |
|---|
Score = 545 (196.9 bits), Expect = 1.3e-52, P = 1.3e-52
Identities = 114/228 (50%), Positives = 149/228 (65%)
Query: 8 KPITHVIFDMDGLLLDTEKFYTEVQELILARYNKTFDWSLKAKMMGKKAIEAAQVFVEET 67
+ +TH +FDMDGLLLDTE+ YT E+IL Y KT+ + +K ++MG + A+ VE
Sbjct: 7 RKVTHCVFDMDGLLLDTERLYTVATEMILEPYGKTYPFEIKEQVMGLQTEPLARFMVEHY 66
Query: 68 GISDKLSAEDFLVQREETLQTLFPTSELMPGASHLIRHLHAKGIPMCVATGSLARHFELK 127
+ +S E++ Q+ + L ++LMPGA L+RHLHA +P C+AT S A ELK
Sbjct: 67 ELP--MSWEEYARQQRANTEILMRNAQLMPGAERLLRHLHANKVPFCLATSSGADMVELK 124
Query: 128 TQKHRELFSLMHHVVRGD-DPEVKQGKPSPDIFLAAAKRFEGGPIDSQEILVFEDAPSGV 186
T +HRELFSL +H V G D EV GKP+PDIFL AA RF G P + LVFED+P+GV
Sbjct: 125 TAQHRELFSLFNHKVCGSSDKEVVNGKPAPDIFLVAAGRF-GVPPKPSDCLVFEDSPNGV 183
Query: 187 LAAKNAGMSVVMVPDPRLDSSYHSNADQLLSSLLGFNPKDWGLPPFED 234
AA +AGM VVMVPDPRL S+A Q+L+SL F P+ +GLP F D
Sbjct: 184 TAANSAGMQVVMVPDPRLSQEKTSHATQVLASLADFKPEQFGLPAFTD 231
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| RGD|1305101 Hdhd1 "haloacid dehalogenase-like hydrolase domain containing 1" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
|---|
Score = 532 (192.3 bits), Expect = 3.1e-51, P = 3.1e-51
Identities = 108/231 (46%), Positives = 148/231 (64%)
Query: 4 VSSKKPITHVIFDMDGLLLDTEKFYTEVQELILARYNKTFDWSLKAKMMGKKAIEAAQVF 63
V +P+TH+IFD+DGLLL+TE YT+V + I +RY K ++W +K+ +MGKKA E Q+
Sbjct: 7 VPQLRPVTHLIFDLDGLLLNTEDLYTDVFQAICSRYGKKYNWDVKSLVMGKKAPETTQII 66
Query: 64 VEETGISDKLSAEDFLVQREETLQTLFPTSELMPGASHLIRHLHAKGIPMCVATGSLARH 123
V+ + +S E L + +E LQ + T+ LMPGA LI HL +P +AT S
Sbjct: 67 VDFLKLP--ISKEQLLEESQERLQKVLHTAALMPGAEELIHHLRKNRLPFALATSSATLS 124
Query: 124 FELKTQKHRELFSLMHHVVRGDDPEVKQGKPSPDIFLAAAKRFEGGPIDSQEILVFEDAP 183
F+ KT +++ FSL HH+V GDDPEV KP+PDIFL AKRF P + ++ LVFED+P
Sbjct: 125 FQTKTSRYKGFFSLFHHIVLGDDPEVINSKPAPDIFLTCAKRFSPPP-NPEDCLVFEDSP 183
Query: 184 SGVLAAKNAGMSVVMVPDPRLDSSYHSNADQLLSSLLGFNPKDWGLPPFED 234
+GV AA GM VVMVP L S + A +LSSL F P+ +GLP F++
Sbjct: 184 NGVEAAVACGMQVVMVPHENLSSDLTTKATLVLSSLHEFKPELFGLPAFDE 234
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| UNIPROTKB|E2R8L4 HDHD1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
|---|
Score = 529 (191.3 bits), Expect = 6.5e-51, P = 6.5e-51
Identities = 110/228 (48%), Positives = 145/228 (63%)
Query: 9 PITHVIF----DMDGLLLDTEKFYTEVQELILARYNKTFDWSLKAKMMGKKAIEAAQVFV 64
P H+I D+ G+ +DTE+ Y+ V + I RY K + W +K+ +MGKKA EAAQ+ +
Sbjct: 8 PQVHIIVPMTCDISGICIDTERLYSVVFQEICDRYGKKYSWDVKSLVMGKKATEAAQIVI 67
Query: 65 EETGISDKLSAEDFLVQREETLQTLFPTSELMPGASHLIRHLHAKGIPMCVATGSLARHF 124
+ + +S E+ + + + L+ LFPT+ LMPG LI HL G+P+ VAT S F
Sbjct: 68 DVLQLP--MSKEELVDESQMKLKELFPTAALMPGVEKLIHHLREHGVPLAVATSSSLLSF 125
Query: 125 ELKTQKHRELFSLMHHVVRGDDPEVKQGKPSPDIFLAAAKRFEGGPIDSQEILVFEDAPS 184
E+KT +H+E FSL H+V GDDPEVK GKP PDIFLA AKRF P ++ LVFEDAP+
Sbjct: 126 EMKTSRHKEFFSLFDHIVLGDDPEVKNGKPDPDIFLACAKRFSPPP-PMEKCLVFEDAPN 184
Query: 185 GVLAAKNAGMSVVMVPDPRLDSSYHSNADQLLSSLLGFNPKDWGLPPF 232
GV AA AGM VVMVPD L S A +L SL F P+ +GLPP+
Sbjct: 185 GVEAALAAGMQVVMVPDGNLQRHLTSKATVVLDSLQDFQPELFGLPPY 232
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| MGI|MGI:1914615 Hdhd1a "haloacid dehalogenase-like hydrolase domain containing 1A" [Mus musculus (taxid:10090)] | Back alignment and assigned GO terms |
|---|
Score = 521 (188.5 bits), Expect = 4.6e-50, P = 4.6e-50
Identities = 108/227 (47%), Positives = 143/227 (62%)
Query: 8 KPITHVIFDMDGLLLDTEKFYTEVQELILARYNKTFDWSLKAKMMGKKAIEAAQVFVEET 67
+P+T +IFD+DGL+L+TE YT+V E I RY K ++W +K+ +MGKKA+E AQ VE
Sbjct: 11 RPVTPLIFDLDGLILNTEDLYTDVFEEICNRYGKKYNWDVKSLVMGKKALETAQTIVEFL 70
Query: 68 GISDKLSAEDFLVQREETLQTLFPTSELMPGASHLIRHLHAKGIPMCVATGSLARHFELK 127
+ +S E+ L + +E LQ + T+ MPGA LI HL +P +AT S F+ K
Sbjct: 71 NLP--ISKEELLKESQEKLQMVLHTAGFMPGAEELIHHLKKHRLPFALATSSETVTFQTK 128
Query: 128 TQKHRELFSLMHHVVRGDDPEVKQGKPSPDIFLAAAKRFEGGPIDSQEILVFEDAPSGVL 187
T +H F L HH+V GDDPEVK GKP DIFL AKRF P D ++ LVFED+P+GV
Sbjct: 129 TSRHTGFFGLFHHIVLGDDPEVKNGKPGMDIFLTCAKRFSPPP-DPKDCLVFEDSPNGVE 187
Query: 188 AAKNAGMSVVMVPDPRLDSSYHSNADQLLSSLLGFNPKDWGLPPFED 234
AA + GM VVMVP L + A +LSSL F P+ +GLP F +
Sbjct: 188 AAIHCGMQVVMVPHENLSADLTRKATLVLSSLHDFKPELFGLPAFTE 234
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| UNIPROTKB|E1BRK1 HDHD1 "Uncharacterized protein" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
|---|
Score = 506 (183.2 bits), Expect = 1.8e-48, P = 1.8e-48
Identities = 101/217 (46%), Positives = 141/217 (64%)
Query: 17 MDGLLLDTEKFYTEVQELILARYNKTFDWSLKAKMMGKKAIEAAQVFVEETGISDKLSAE 76
MDGLLLDTE+ YT V E I R+ K++ W +K+ +MGKKA+E AQ+ + + ++ E
Sbjct: 1 MDGLLLDTERLYTLVFEEICGRFGKSYTWDVKSLVMGKKALEGAQIIRDVLDLP--ITKE 58
Query: 77 DFLVQREETLQTLFPTSELMPGASHLIRHLHAKGIPMCVATGSLARHFELKTQKHRELFS 136
+ L + + + +F T+ELMPG + LI+HLH IP+ VAT S F++KT +H++ F+
Sbjct: 59 ELLHESKMKQEKIFHTAELMPGVNKLIQHLHKHNIPIAVATSSAEVTFQMKTSRHKDFFN 118
Query: 137 LMHHVVRGDDPEVKQGKPSPDIFLAAAKRFEGGPIDSQEILVFEDAPSGVLAAKNAGMSV 196
L HH+V GDDPEVK GKP PD FL AKRF P ++ LVFED+P GV A AGM V
Sbjct: 119 LFHHIVLGDDPEVKGGKPQPDAFLVCAKRFHP-PAPPEKCLVFEDSPLGVKGALAAGMQV 177
Query: 197 VMVPDPRLDSSYHSNADQLLSSLLGFNPKDWGLPPFE 233
VM+PD L + A LL+S+ F P+ +GLP ++
Sbjct: 178 VMIPDENLSPNLKKEATLLLNSMEDFKPELFGLPAYD 214
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Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
| ID | Name | Annotated EC number | Identity | Query coverage | Hit coverage | RBH(Q2H) | RBH(H2Q) |
| Q86ZR7 | YKD3A_YEAST | 3, ., -, ., -, ., - | 0.3433 | 0.9156 | 0.9194 | yes | no |
| Q08623 | HDHD1_HUMAN | 3, ., 1, ., 3, ., n, 6 | 0.5044 | 0.9409 | 0.9780 | yes | no |
| O59760 | YJM7_SCHPO | 3, ., -, ., -, ., - | 0.3688 | 0.8776 | 0.8813 | yes | no |
| Q94529 | GS1_DROME | 3, ., 1, ., 3, ., n, 6 | 0.5 | 0.9451 | 0.9696 | yes | no |
| Q9D5U5 | HDHD1_MOUSE | 3, ., 1, ., 3, ., n, 6 | 0.4718 | 0.9620 | 0.9743 | yes | no |
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
| Prediction Level | EC number | Confidence of Prediction |
| 3rd Layer | 3.1.3 | LOW CONFIDENCE prediction! |
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
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 | GSVIVG00031358001 | SubName- Full=Chromosome chr11 scaffold_56, whole genome shotgun sequence; (234 aa) | |||||||||
(Vitis vinifera) | |||||||||||
Predicted Functional Partners: | |||||||||||
 | GSVIVG00000420001 | SubName- Full=Chromosome chr2 scaffold_105, whole genome shotgun sequence; (369 aa) | • | • | 0.612 | ||||||
 | GSVIVG00029407001 | SubName- Full=Chromosome chr13 scaffold_48, whole genome shotgun sequence; (353 aa) | • | • | 0.608 | ||||||
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 237 | |||
| PLN02811 | 220 | PLN02811, PLN02811, hydrolase | 1e-150 | |
| PLN02940 | 382 | PLN02940, PLN02940, riboflavin kinase | 3e-57 | |
| COG0637 | 221 | COG0637, COG0637, Predicted phosphatase/phosphohex | 3e-40 | |
| TIGR02009 | 185 | TIGR02009, PGMB-YQAB-SF, beta-phosphoglucomutase f | 1e-25 | |
| pfam00702 | 187 | pfam00702, Hydrolase, haloacid dehalogenase-like h | 8e-24 | |
| TIGR01509 | 177 | TIGR01509, HAD-SF-IA-v3, haloacid dehalogenase sup | 6e-23 | |
| pfam13419 | 176 | pfam13419, HAD_2, Haloacid dehalogenase-like hydro | 1e-22 | |
| TIGR01990 | 185 | TIGR01990, bPGM, beta-phosphoglucomutase | 2e-18 | |
| PRK10725 | 188 | PRK10725, PRK10725, fructose-1-P/6-phosphogluconat | 4e-18 | |
| COG0546 | 220 | COG0546, Gph, Predicted phosphatases [General func | 2e-17 | |
| PRK11587 | 218 | PRK11587, PRK11587, putative phosphatase; Provisio | 3e-13 | |
| cd01427 | 139 | cd01427, HAD_like, Haloacid dehalogenase-like hydr | 4e-12 | |
| PLN02779 | 286 | PLN02779, PLN02779, haloacid dehalogenase-like hyd | 3e-11 | |
| TIGR01549 | 162 | TIGR01549, HAD-SF-IA-v1, haloacid dehalogenase sup | 3e-10 | |
| PRK13222 | 226 | PRK13222, PRK13222, phosphoglycolate phosphatase; | 4e-09 | |
| pfam13242 | 74 | pfam13242, Hydrolase_like, HAD-hyrolase-like | 2e-08 | |
| PLN02919 | 1057 | PLN02919, PLN02919, haloacid dehalogenase-like hyd | 9e-07 | |
| COG1011 | 229 | COG1011, COG1011, Predicted hydrolase (HAD superfa | 1e-06 | |
| TIGR03351 | 220 | TIGR03351, PhnX-like, phosphonatase-like hydrolase | 2e-05 | |
| PRK10826 | 222 | PRK10826, PRK10826, 2-deoxyglucose-6-phosphatase; | 3e-05 | |
| PRK10563 | 221 | PRK10563, PRK10563, 6-phosphogluconate phosphatase | 4e-05 | |
| TIGR02254 | 224 | TIGR02254, YjjG/YfnB, HAD superfamily (subfamily I | 1e-04 | |
| TIGR01449 | 213 | TIGR01449, PGP_bact, 2-phosphoglycolate phosphatas | 1e-04 | |
| TIGR01454 | 205 | TIGR01454, AHBA_synth_RP, 3-amino-5-hydroxybenoic | 2e-04 | |
| PLN03243 | 260 | PLN03243, PLN03243, haloacid dehalogenase-like hyd | 2e-04 | |
| TIGR02253 | 221 | TIGR02253, CTE7, HAD superfamily (subfamily IA) hy | 4e-04 | |
| PRK10826 | 222 | PRK10826, PRK10826, 2-deoxyglucose-6-phosphatase; | 0.001 | |
| COG0560 | 212 | COG0560, SerB, Phosphoserine phosphatase [Amino ac | 0.001 | |
| TIGR01460 | 236 | TIGR01460, HAD-SF-IIA, Haloacid Dehalogenase Super | 0.003 | |
| PRK13288 | 214 | PRK13288, PRK13288, pyrophosphatase PpaX; Provisio | 0.004 |
| >gnl|CDD|178407 PLN02811, PLN02811, hydrolase | Back alignment and domain information |
|---|
Score = 416 bits (1071), Expect = e-150
Identities = 174/218 (79%), Positives = 193/218 (88%)
Query: 17 MDGLLLDTEKFYTEVQELILARYNKTFDWSLKAKMMGKKAIEAAQVFVEETGISDKLSAE 76
MDGLLLDTEKFYTEVQE ILARY KTFDWSLKAKMMGKKAIEAA++FVEE+G+SD LS E
Sbjct: 1 MDGLLLDTEKFYTEVQEKILARYGKTFDWSLKAKMMGKKAIEAARIFVEESGLSDSLSPE 60
Query: 77 DFLVQREETLQTLFPTSELMPGASHLIRHLHAKGIPMCVATGSLARHFELKTQKHRELFS 136
DFLV+RE LQ LFPTS+LMPGA L+RHLHAKGIP+ +ATGS RHF+LKTQ+H ELFS
Sbjct: 61 DFLVEREAMLQDLFPTSDLMPGAERLVRHLHAKGIPIAIATGSHKRHFDLKTQRHGELFS 120
Query: 137 LMHHVVRGDDPEVKQGKPSPDIFLAAAKRFEGGPIDSQEILVFEDAPSGVLAAKNAGMSV 196
LMHHVV GDDPEVKQGKP+PDIFLAAA+RFE GP+D ++LVFEDAPSGV AAKNAGMSV
Sbjct: 121 LMHHVVTGDDPEVKQGKPAPDIFLAAARRFEDGPVDPGKVLVFEDAPSGVEAAKNAGMSV 180
Query: 197 VMVPDPRLDSSYHSNADQLLSSLLGFNPKDWGLPPFED 234
VMVPDPRLD SY ADQ+LSSLL F P++WGLPPF D
Sbjct: 181 VMVPDPRLDKSYCKGADQVLSSLLDFKPEEWGLPPFPD 218
|
Length = 220 |
| >gnl|CDD|178528 PLN02940, PLN02940, riboflavin kinase | Back alignment and domain information |
|---|
Score = 186 bits (473), Expect = 3e-57
Identities = 97/237 (40%), Positives = 141/237 (59%), Gaps = 15/237 (6%)
Query: 2 AAVSSKKPITHVIFDMDGLLLDTEKFYTEVQELILARYNKTFDWSLKAKMMGKKAIEAAQ 61
AA KK ++HVI D+DG LL+T+ ++V + L +Y K +D K++GK +EAA
Sbjct: 3 AAKPLKKLVSHVILDLDGTLLNTDGIVSDVLKAFLVKYGKQWDGREAQKIVGKTPLEAAA 62
Query: 62 VFVEETGISDKLSAEDFLVQREETLQTLFPTSELMPGASHLIRHLHAKGIPMCVATGSLA 121
VE+ G+ S ++F + L + + +PGA+ LI+HL + G+PM +A+ S
Sbjct: 63 TVVEDYGLP--CSTDEFNSEITPLLSEQWCNIKALPGANRLIKHLKSHGVPMALASNSPR 120
Query: 122 RHFELKTQKH---RELFSLMHHVVRGDDPEVKQGKPSPDIFLAAAKRFEGGPIDSQEILV 178
+ E K H +E FS+ +V GD EV++GKPSPDIFL AAKR P + LV
Sbjct: 121 ANIEAKISCHQGWKESFSV---IVGGD--EVEKGKPSPDIFLEAAKRLNVEPSNC---LV 172
Query: 179 FEDAPSGVLAAKNAGMSVVMVPD-PRLDSSYHSNADQLLSSLLGFNPKDWGLPPFED 234
ED+ GV+A K AGM V+ VP P+ Y S+AD++++SLL P+ WGLPPF D
Sbjct: 173 IEDSLPGVMAGKAAGMEVIAVPSIPKQTHLY-SSADEVINSLLDLQPEKWGLPPFND 228
|
Length = 382 |
| >gnl|CDD|223710 COG0637, COG0637, Predicted phosphatase/phosphohexomutase [General function prediction only] | Back alignment and domain information |
|---|
Score = 137 bits (347), Expect = 3e-40
Identities = 59/190 (31%), Positives = 85/190 (44%), Gaps = 6/190 (3%)
Query: 13 VIFDMDGLLLDTEKFYTEVQELILARYNKTFDWSLKAKMMGKKAIEAAQVFVEETGISDK 72
VIFDMDG L+D+E + L Y ++ G + + D
Sbjct: 5 VIFDMDGTLVDSEPLHARAWLEALKEYGIEISDEEIRELHGGGIARIIDLLRKLAAGEDP 64
Query: 73 LSAEDFLVQREETLQTLFPTSELMPGASHLIRHLHAKGIPMCVATGSLARHFELKTQKHR 132
+ E + +PG L+ L A+GIP+ VA+ S R +
Sbjct: 65 ADLAELERLLYEAEALELEGLKPIPGVVELLEQLKARGIPLAVASSSP-RRAAERVLARL 123
Query: 133 ELFSLMHHVVRGDDPEVKQGKPSPDIFLAAAKRFEGGPIDSQEILVFEDAPSGVLAAKNA 192
L +V DD V +GKP+PDI+L AA+R +D +E +V ED+P+G+ AAK A
Sbjct: 124 GLLDYFDVIVTADD--VARGKPAPDIYLLAAERLG---VDPEECVVVEDSPAGIQAAKAA 178
Query: 193 GMSVVMVPDP 202
GM VV VP
Sbjct: 179 GMRVVGVPAG 188
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Length = 221 |
| >gnl|CDD|213673 TIGR02009, PGMB-YQAB-SF, beta-phosphoglucomutase family hydrolase | Back alignment and domain information |
|---|
Score = 98.6 bits (246), Expect = 1e-25
Identities = 60/193 (31%), Positives = 90/193 (46%), Gaps = 11/193 (5%)
Query: 10 ITHVIFDMDGLLLDTEKFYTEVQELILARYNKTFDWSLKAKMMGKKAIEAAQVFVEETGI 69
VIFDMDG++ DT + + + I A+Y +FD + G + + ++ G
Sbjct: 1 YKAVIFDMDGVITDTAPLHAQAWKHIAAKYGISFDKQYNESLKGLSREDILRAILKLRGD 60
Query: 70 SDKLSAEDFLVQRE-ETLQTLFPT--SELMPGASHLIRHLHAKGIPMCVATGSLARHFEL 126
L L +R+ E + L ++PG +L++ L AKGI + + + S L
Sbjct: 61 GLSLEEIHQLAERKNELYRELLRLTGVAVLPGIRNLLKRLKAKGIAVGLGSSSKNAPRIL 120
Query: 127 KTQKHRELFSLMHHVVRGDDPEVKQGKPSPDIFLAAAKRFEGGPIDSQEILVFEDAPSGV 186
R+ F D EVK GKP P+ FL AA+ + E +VFEDA +GV
Sbjct: 121 AKLGLRDYFD-----AIVDASEVKNGKPHPETFLLAAELLG---VPPNECIVFEDALAGV 172
Query: 187 LAAKNAGMSVVMV 199
AA+ AGM V V
Sbjct: 173 QAARAAGMFAVAV 185
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This subfamily model groups together three clades: the characterized beta-phosphoglucomutases (including those from E.coli, B.subtilus and L.lactis, TIGR01990), a clade of putative bPGM's from mycobacteria and a clade including the uncharacterized E.coli and H.influenzae yqaB genes which may prove to be beta-mutases of a related 1-phosphosugar. All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509). Length = 185 |
| >gnl|CDD|216069 pfam00702, Hydrolase, haloacid dehalogenase-like hydrolase | Back alignment and domain information |
|---|
Score = 93.9 bits (233), Expect = 8e-24
Identities = 47/194 (24%), Positives = 70/194 (36%), Gaps = 17/194 (8%)
Query: 10 ITHVIFDMDGLLLDTEKFYTEVQEL--ILARYNKTFDWSLKAKMMGKKAIEAAQVFVEET 67
I V+FD+DG L D E E + L A + + + E + +
Sbjct: 1 IKAVVFDLDGTLTDGEPVVPEAEALLEAAAALGVAIVIAAGENLTKEGREELVRRLLLRA 60
Query: 68 GISDKL-------SAEDFLVQREETLQTLFPTSELMPGASHLIRHLHAKGIPMCVATGSL 120
++L A V L + T L PGA ++ L GI + + TG
Sbjct: 61 LAGEELLEELLRAGATVVAVLDLVVLGLIALTDPLYPGAREALKELKEAGIKLAILTGDN 120
Query: 121 ARHFELKTQKHRELFSLMHHVVRGDD-PEVKQGKPSPDIFLAAAKRFEGGPIDSQEILVF 179
L L +V D V GKP P IF A + + +E+L+
Sbjct: 121 RLT----ANAIARLLGLFDALVSADLYGLVGVGKPDPKIFELALEELG---VKPEEVLMV 173
Query: 180 EDAPSGVLAAKNAG 193
D + + AAK AG
Sbjct: 174 GDGVNDIPAAKAAG 187
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This family is structurally different from the alpha/beta hydrolase family (pfam00561). This family includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure of the family consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of Pseudomonas sp. (S)-2-haloacid dehalogenase 1. The rest of the fold is composed of the core alpha/beta domain. Those members with the characteristic DxD triad at the N-terminus are probably phosphatidylglycerolphosphate (PGP) phosphatases involved in cardiolipin biosynthesis in the mitochondria. Length = 187 |
| >gnl|CDD|233443 TIGR01509, HAD-SF-IA-v3, haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED | Back alignment and domain information |
|---|
Score = 91.3 bits (227), Expect = 6e-23
Identities = 52/194 (26%), Positives = 84/194 (43%), Gaps = 23/194 (11%)
Query: 12 HVIFDMDGLLLDTEKFYTEVQELILARYNKTFDWSLKAKMMGKKAIEAAQVFVEETGISD 71
V+FD+DG+L+DT + +L+ L +G A + + + G +
Sbjct: 1 AVLFDLDGVLVDTA---HAIAKLVDRAEFPLVPDELGVSEVGS-LELALRRWKAKYGRTM 56
Query: 72 ------KLSAEDFLVQREETLQTLFPTSELMPGASHLIRHLHAKGIPMCVATGSLARHFE 125
L + F E+ + +PG L+ L A+G + + T S +
Sbjct: 57 SAEDAQLLYKQLFYEALEKEG------LKPLPGVRALLEALRARGKKLALLTNSPRADAK 110
Query: 126 LKTQKHRELFSLMHHVVRGDDPEVKQGKPSPDIFLAAAKRFEGGPIDSQEILVFEDAPSG 185
L L +L V+ D +V GKP PDI+L A K+ + E L +D+P+G
Sbjct: 111 LV--LELGLRALFDVVI--DSSDVGLGKPDPDIYLQALKKL---GLKPSECLFVDDSPAG 163
Query: 186 VLAAKNAGMSVVMV 199
+ AAK AGM V+V
Sbjct: 164 IDAAKAAGMHTVLV 177
|
This model represents part of one structural subfamily of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The superfamily is defined by the presence of three short catalytic motifs. The subfamilies are defined based on the location and the observed or predicted fold of a so-called "capping domain", or the absence of such a domain. Subfamily I consists of sequences in which the capping domain is found in between the first and second catalytic motifs. Subfamily II consists of sequences in which the capping domain is found between the second and third motifs. Subfamily III sequences have no capping domain in either of these positions.The Subfamily IA and IB capping domains are predicted by PSI-PRED to consist of an alpha helical bundle. Subfamily I encompasses such a wide region of sequence space (the sequences are highly divergent) that representing it with a single model is impossible, resulting in an overly broad description which allows in many unrelated sequences. Subfamily IA and IB are separated based on an aparrent phylogenetic bifurcation. Subfamily IA is still too broad to model, but cannot be further subdivided into large chunks based on phylogenetic trees. Of the three motifs defining the HAD superfamily, the third has three variant forms : (1) hhhhsDxxx(x)D, (2) hhhhssxxx(x)D and (3) hhhhDDxxx(x)s where _s_ refers to a small amino acid and _h_ to a hydrophobic one. All three of these variants are found in subfamily IA. Individual models were made based on seeds exhibiting only one of the variants each. Variant 3 (this model) is found in the enzymes beta-phosphoglucomutase (TIGR01990) and deoxyglucose-6-phosphatase, while many other enzymes of subfamily IA exhibit this variant as well as variant 1 (TIGR01549). These three variant models were created withthe knowledge that there will be overlap among them - this is by design and serves the purpose of eliminating the overlap with models of more distantly relatedHAD subfamilies caused by an overly broad single model [Unknown function, Enzymes of unknown specificity]. Length = 177 |
| >gnl|CDD|222115 pfam13419, HAD_2, Haloacid dehalogenase-like hydrolase | Back alignment and domain information |
|---|
Score = 90.5 bits (225), Expect = 1e-22
Identities = 49/188 (26%), Positives = 73/188 (38%), Gaps = 13/188 (6%)
Query: 13 VIFDMDGLLLDTEKFYTE-VQELILARYNKTFDWSLKAKMMGKKAIEAAQVFVEETGISD 71
+IFD+DG L+D + E +++L R + G EA + E I
Sbjct: 1 IIFDLDGTLIDFDPVIFEALRDLAAERLGLDISAEELREAGGLPFDEALADLLREHPIDP 60
Query: 72 KLSAEDFLVQREETLQTLFPTSELMPGASHLIRHLHAKGIPMCVATGSLARHFELKTQKH 131
E L E E P L+R L AKG+ + + + E +
Sbjct: 61 DEILEALLEYNLE------SRLEPFPDVVELLRRLKAKGVKLVILSNGSREAVERLL-EK 113
Query: 132 RELFSLMHHVVRGDDPEVKQGKPSPDIFLAAAKRFEGGPIDSQEILVFEDAPSGVLAAKN 191
L L V DD V KP P+ + +R P +EIL +D+P + AA+
Sbjct: 114 LGLLDLFDAVFTSDD--VGARKPDPEAYERVLERLGLPP---EEILFIDDSPEDLEAARA 168
Query: 192 AGMSVVMV 199
AG+ V V
Sbjct: 169 AGIKTVHV 176
|
Length = 176 |
| >gnl|CDD|213672 TIGR01990, bPGM, beta-phosphoglucomutase | Back alignment and domain information |
|---|
Score = 79.7 bits (197), Expect = 2e-18
Identities = 58/194 (29%), Positives = 92/194 (47%), Gaps = 18/194 (9%)
Query: 13 VIFDMDGLLLDTEKFYTEVQELILARYNKTFDWSLKAKMMGKKAIEAAQVFVEETGISDK 72
VIFD+DG++ DT +++ + + FD + G E+ + ++ G K
Sbjct: 2 VIFDLDGVITDTAEYHYLAWKHLADELGIPFDEEFNESLKGVSREESLERILDLGG--KK 59
Query: 73 LSAEDF--LVQRE-----ETLQTLFPTSELMPGASHLIRHLHAKGIPMCVATGSLARHFE 125
S E+ L +R+ E L+ L P +++PG L+ L I + +A+ S
Sbjct: 60 YSEEEKEELAERKNDYYVELLKELTPA-DVLPGIKSLLADLKKNNIKIALASASKNAPTI 118
Query: 126 LKTQKHRELFSLMHHVVRGDDPEVKQGKPSPDIFLAAAKRFEGGPIDSQEILVFEDAPSG 185
L+ + + F D E+K+GKP P+IFLAAA EG + E + EDA +G
Sbjct: 119 LEKLELIDYFD-----AIVDPAELKKGKPDPEIFLAAA---EGLGVSPSECIGIEDAQAG 170
Query: 186 VLAAKNAGMSVVMV 199
+ A K AGM V V
Sbjct: 171 IEAIKAAGMFAVGV 184
|
This model represents the beta-phosphoglucomutase enzyme which catalyzes the interconverison of beta-D-glucose-1-phosphate and beta-D-glucose-6-phosphate. The 6-phosphate is capable of non-enzymatic anomerization (alpha <-> beta) while the 1-phosphate is not. A separate enzyme is responsible for the isomerization of the alpha anomers. Beta-D-glucose-1-phosphate results from the phosphorylysis of maltose (2.4.1.8), trehalose (2.4.1.64) or trehalose-6-phosphate (2.4.1.216). Alternatively, these reactions can be run in the synthetic direction to create the disaccharides. All sequenced genomes which contain a member of this family also appear to contain at least one putative maltose or trehalose phosphorylase. Three species, Lactococcus, Enterococcus and Neisseria appear to contain a pair of paralogous beta-PGM's. Beta-phosphoglucomutase is a member of the haloacid dehalogenase superfamily of hydrolase enzymes. These enzymes are characterized by a series of three catalytic motifs positioned within an alpha-beta (Rossman) fold. beta-PGM contains an inserted alpha helical domain in between the first and second conserved motifs and thus is a member of subfamily IA of the superfamily. The third catalytic motif comes in three variants, the third of which, containing a conserved DD or ED, is the only one found here as well as in several other related enzymes (TIGR01509). The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state [Energy metabolism, Biosynthesis and degradation of polysaccharides]. Length = 185 |
| >gnl|CDD|182679 PRK10725, PRK10725, fructose-1-P/6-phosphogluconate phosphatase; Provisional | Back alignment and domain information |
|---|
Score = 79.0 bits (195), Expect = 4e-18
Identities = 63/196 (32%), Positives = 90/196 (45%), Gaps = 29/196 (14%)
Query: 14 IFDMDGLLLDTEKFYTEVQELILARYNKTFDWSLKAKMMGKKAIEAAQVFVEETGISDKL 73
IFDMDG +LDTE + + +L RY FD + G AQ +E ++
Sbjct: 9 IFDMDGTILDTEPTHRKAWREVLGRYGLQFDEQAMVALNGSPTWRIAQAIIE----LNQA 64
Query: 74 SAEDFLVQREET--LQT-LFPTSELMPGASHLIRHLHAKGIPMCVATGS-------LARH 123
+ + RE+T +++ L + E +P +++ H + PM V TGS L H
Sbjct: 65 DLDPHALAREKTEAVKSMLLDSVEPLPLIE-VVKAWHGRR-PMAVGTGSESAIAEALLAH 122
Query: 124 FELKTQKHRELFSLMHHVVRGDDPEVKQGKPSPDIFLAAAKRFEGGPIDSQEILVFEDAP 183
L R F VV DD V+ KP+PD FL A+ P + +VFEDA
Sbjct: 123 LGL-----RRYFDA---VVAADD--VQHHKPAPDTFLRCAQLMGVQP---TQCVVFEDAD 169
Query: 184 SGVLAAKNAGMSVVMV 199
G+ AA+ AGM V V
Sbjct: 170 FGIQAARAAGMDAVDV 185
|
Length = 188 |
| >gnl|CDD|223620 COG0546, Gph, Predicted phosphatases [General function prediction only] | Back alignment and domain information |
|---|
Score = 77.9 bits (192), Expect = 2e-17
Identities = 48/194 (24%), Positives = 76/194 (39%), Gaps = 9/194 (4%)
Query: 8 KPITHVIFDMDGLLLDTEKFYTEVQELILARYNKTF-DWSLKAKMMGKKAIEAAQVFVEE 66
I ++FD+DG L+D+ + LA D +++G E + + E
Sbjct: 2 MMIKAILFDLDGTLVDSAEDILRAFNAALAELGLPPLDEEEIRQLIGLGLDELIERLLGE 61
Query: 67 TGISDKLSAEDFLVQREETLQTLFPTSELMPGASHLIRHLHAKGIPMCVATGSLARHFEL 126
+ L + T S L PG L+ L + G + + T EL
Sbjct: 62 ADEEAAAELVERLREEFLTAYAELLESRLFPGVKELLAALKSAGYKLGIVTN--KPEREL 119
Query: 127 -KTQKHRELFSLMHHVVRGDDPEVKQGKPSPDIFLAAAKRFEGGPIDSQEILVFEDAPSG 185
K L +V GDD V KP P+ L ++ +D +E L+ D+ +
Sbjct: 120 DILLKALGLADYFDVIVGGDD--VPPPKPDPEPLLLLLEKLG---LDPEEALMVGDSLND 174
Query: 186 VLAAKNAGMSVVMV 199
+LAAK AG+ V V
Sbjct: 175 ILAAKAAGVPAVGV 188
|
Length = 220 |
| >gnl|CDD|183215 PRK11587, PRK11587, putative phosphatase; Provisional | Back alignment and domain information |
|---|
Score = 66.2 bits (162), Expect = 3e-13
Identities = 51/133 (38%), Positives = 65/133 (48%), Gaps = 26/133 (19%)
Query: 96 MPGASHLIRHLHAKGIPMCVAT-GSL----ARHFELKTQKHRELFSLMHHVVRGDDPEVK 150
+PGA L+ HL+ GIP + T GS+ ARH K L + V VK
Sbjct: 85 LPGAIALLNHLNKLGIPWAIVTSGSVPVASARH------KAAGLPAPEVFVTA---ERVK 135
Query: 151 QGKPSPDIFLAAAKRFEGGPIDSQEILVFEDAPSGVLAAKNAGMSVVMV---PD-PRLDS 206
+GKP PD +L A+ P QE +V EDAP+GVL+ AG V+ V D PRLD
Sbjct: 136 RGKPEPDAYLLGAQLLGLAP---QECVVVEDAPAGVLSGLAAGCHVIAVNAPADTPRLD- 191
Query: 207 SYHSNADQLLSSL 219
D +L SL
Sbjct: 192 ----EVDLVLHSL 200
|
Length = 218 |
| >gnl|CDD|119389 cd01427, HAD_like, Haloacid dehalogenase-like hydrolases | Back alignment and domain information |
|---|
Score = 61.2 bits (149), Expect = 4e-12
Identities = 31/131 (23%), Positives = 47/131 (35%), Gaps = 16/131 (12%)
Query: 82 REETLQTLFPTSELMPGASHLIRHLHAKGIPMCVATGS----LARHFEL--KTQKHRELF 135
E EL PG ++ L KGI + +AT + E +
Sbjct: 12 DSEPGIAEIEELELYPGVKEALKELKEKGIKLALATNKSRREVLELLEELGLDDYFDPVI 71
Query: 136 S-------LMHHVVRGDDPEVKQGKPSPDIFLAAAKRFEGGPIDSQEILVFEDAPSGVLA 188
+ + GKP+PD LAA K +D +E+L+ D+ + +
Sbjct: 72 TSNGAAIYYPKEGLFLGGGPFDIGKPNPDKLLAALKLLG---VDPEEVLMVGDSLNDIEM 128
Query: 189 AKNAGMSVVMV 199
AK AG V V
Sbjct: 129 AKAAGGLGVAV 139
|
The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases. Length = 139 |
| >gnl|CDD|215416 PLN02779, PLN02779, haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Score = 61.3 bits (149), Expect = 3e-11
Identities = 55/234 (23%), Positives = 87/234 (37%), Gaps = 57/234 (24%)
Query: 14 IFDMDGLLLDTEKFYTEVQELILARYNKTF--------DWSL------------KAKM-- 51
+FD DG+L++TE+ + +N F +W + K +M
Sbjct: 44 LFDCDGVLVETER------DGHRVAFNDAFKEFGLRPVEWDVELYDELLNIGGGKERMTW 97
Query: 52 ----MGKKAIEAAQVFVEETGISDKLSA------EDFLVQREETLQTLFPTSELMPGASH 101
G + +E + + + E F E L PG
Sbjct: 98 YFNENGWPTSTIEKAPKDEEERKELVDSLHDRKTELFKELIESG------ALPLRPGVLR 151
Query: 102 LIRHLHAKGIPMCVATGSLARHFE--LKTQKHRELFSLMHHVVRGDDPEVKQGKPSPDIF 159
L+ A GI + V + S + + T E + V GDD V + KP PDI+
Sbjct: 152 LMDEALAAGIKVAVCSTSNEKAVSKIVNTLLGPERAQGLD-VFAGDD--VPKKKPDPDIY 208
Query: 160 LAAAKRFEGGPIDSQEILVFEDAPSGVLAAKNAGMSVVMVPDPRLDSSYHSNAD 213
AA+ +D +V ED+ G+ AAK AGM ++ SSY ++ D
Sbjct: 209 NLAAETLG---VDPSRCVVVEDSVIGLQAAKAAGMRCIVTK-----SSYTADED 254
|
Length = 286 |
| >gnl|CDD|233463 TIGR01549, HAD-SF-IA-v1, haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E | Back alignment and domain information |
|---|
Score = 57.0 bits (138), Expect = 3e-10
Identities = 42/190 (22%), Positives = 71/190 (37%), Gaps = 36/190 (18%)
Query: 12 HVIFDMDGLLLDTEKFYTEVQELILARYN------KTF--DWSLKAKMMGKKAIEAAQVF 63
++FD+DG L+D + + K L +++ + A EA +
Sbjct: 1 AILFDIDGTLVDIKFAIRRAFAQTFEEFGLNPAAFKRLKALRGLAEELLWRIATEALEEL 60
Query: 64 VEETGISDKLSAEDFLVQREETLQTLFPTSELMPGASHLIRHLHAKGIPMCVATGSLARH 123
G + + +PGA+ L+ L GI + + + R
Sbjct: 61 QGHIGYDAEEAY--------------------IPGAADLLPRLKEAGIKLGIISNGSLRA 100
Query: 124 FELKTQKHRELFSLMHHVVRGDDPEVKQGKPSPDIFLAAAKRFEGGPIDSQEILVFEDAP 183
+L +KH L ++ D+ KP P+IFLAA + P E+L D
Sbjct: 101 QKLLLRKH-GLGDYFELILGSDEI---GSKPEPEIFLAALESLGVPP----EVLHVGDNL 152
Query: 184 SGVLAAKNAG 193
S + A+NAG
Sbjct: 153 SDIKGARNAG 162
|
This model represents part of one structural subfamily of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The superfamily is defined by the presence of three short catalytic motifs. The subfamilies are defined based on the location and the observed or predicted fold of a so-called "capping domain", or the absence of such a domain. Subfamily I consists of sequences in which the capping domain is found in between the first and second catalytic motifs. Subfamily II consists of sequences in which the capping domain is found between the second and third motifs. Subfamily III sequences have no capping domain in either of these positions.The Subfamily IA and IB capping domains are predicted by PSI-PRED to consist of an alpha helical bundle. Subfamily I encompasses such a wide region of sequence space (the sequences are highly divergent) that modelling it with a single representation is impossible, resulting in an overly broad description which allows in many unrelated sequences. Subfamily IA and IB are separated based on an aparrent phylogenetic bifurcation. Subfamily IA is still too broad to model, but cannot be further subdivided into large chunks based on phylogenetic trees. Of the three motifs defining the HAD superfamily, the third has three variant forms : (1) hhhhsDxxx(x)(D/E), (2) hhhhssxxx(x)D and (3) hhhhDDxxx(x)s where _s_ refers to a small amino acid and _h_ to a hydrophobic one. All three of these variants are found in subfamily IA. Individual models were made based on seeds exhibiting only one of the variants each. Variant 1 (this model) is found in the enzymes phosphoglycolate phosphatase (TIGR01449) and enolase-phosphatase. These three variant models (see also TIGR01493 and TIGR01509) were created withthe knowledge that there will be overlap among them - this is by design and serves the purpose of eliminating the overlap with models of more distantly relatedHAD subfamilies caused by an overly broad single model [Unknown function, Enzymes of unknown specificity]. Length = 162 |
| >gnl|CDD|237310 PRK13222, PRK13222, phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Score = 54.8 bits (133), Expect = 4e-09
Identities = 51/216 (23%), Positives = 77/216 (35%), Gaps = 49/216 (22%)
Query: 8 KPITHVIFDMDGLLLDTEKFYTEVQELILARYNKTFDWSLKAKMMGKKAIEAAQV----- 62
I V FD+DG L+D+ +L A + +L A +G +V
Sbjct: 4 MDIRAVAFDLDGTLVDS------APDLAAA-----VNAALAA--LGLPPAGEERVRTWVG 50
Query: 63 -----FVEE--TGISDKLSAEDFLVQREETL----QTLFPTSELMPGASHLIRHLHAKGI 111
VE T + E RE + + S L PG + L A G
Sbjct: 51 NGADVLVERALTWAGREPDEELLEKLRELFDRHYAENVAGGSRLYPGVKETLAALKAAGY 110
Query: 112 PMCVATGS-------LARHFELKTQKHRELFSLMHHVVRGDDPEVKQGKPSPDIFLAAAK 164
P+ V T L + + FS+ V+ GD + KP P L A +
Sbjct: 111 PLAVVTNKPTPFVAPLLEALGI-----ADYFSV---VIGGDS--LPNKKPDPAPLLLACE 160
Query: 165 RFEGGPIDSQEILVFEDAPSGVLAAKNAGMSVVMVP 200
+ P +E+L D+ + + AA+ AG V V
Sbjct: 161 KLGLDP---EEMLFVGDSRNDIQAARAAGCPSVGVT 193
|
Length = 226 |
| >gnl|CDD|222003 pfam13242, Hydrolase_like, HAD-hyrolase-like | Back alignment and domain information |
|---|
Score = 50.0 bits (120), Expect = 2e-08
Identities = 16/48 (33%), Positives = 30/48 (62%), Gaps = 3/48 (6%)
Query: 152 GKPSPDIFLAAAKRFEGGPIDSQEILVFEDAPSGVLAAKNAGMSVVMV 199
GKP+P + AA +R +D +E ++ D+ + +LAA+ AG+ ++V
Sbjct: 3 GKPNPGMLRAALERLG---VDPEECVMIGDSDTDILAARAAGIRTILV 47
|
Length = 74 |
| >gnl|CDD|215497 PLN02919, PLN02919, haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Score = 49.1 bits (117), Expect = 9e-07
Identities = 24/47 (51%), Positives = 31/47 (65%), Gaps = 3/47 (6%)
Query: 153 KPSPDIFLAAAKRFEGGPIDSQEILVFEDAPSGVLAAKNAGMSVVMV 199
KP+PDIFLAAAK + + E +V EDA +GV AA+ AGM + V
Sbjct: 218 KPAPDIFLAAAKILG---VPTSECVVIEDALAGVQAARAAGMRCIAV 261
|
Length = 1057 |
| >gnl|CDD|223943 COG1011, COG1011, Predicted hydrolase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Score = 47.6 bits (113), Expect = 1e-06
Identities = 49/223 (21%), Positives = 80/223 (35%), Gaps = 20/223 (8%)
Query: 10 ITHVIFDMDGLLLDTEKFYTEVQELILARYNKTFDWSLKAKMMGKKAIEA---AQVFVEE 66
I ++FD+DG LLD + A A + + +EA + E
Sbjct: 4 IKAILFDLDGTLLDFDSAEFRAVLAEFAEIGVPETLEELALLKLIEKLEARFLRGEYTGE 63
Query: 67 TGISDK--------LSAEDFLVQREETLQTLFPTSELMPGASHLIRHLHAKGIPMCVATG 118
G++ + L ++ EE L L P A ++ L K + + T
Sbjct: 64 YGLTLERLLELLERLLGDEDAELVEELLAALAKLLPDYPEALEALKELGKK-YKLGILTN 122
Query: 119 SLARHFELKTQKHRELFSLMHHVVRGDDPEVKQGKPSPDIFLAAAKRFEGGPIDSQEILV 178
H E K + L V +D V KP P+IF A ++ + +E L
Sbjct: 123 GARPHQERK-LRQLGLLDYFDAVFISED--VGVAKPDPEIFEYALEKLG---VPPEEALF 176
Query: 179 FED-APSGVLAAKNAGM-SVVMVPDPRLDSSYHSNADQLLSSL 219
D + +L A+ GM +V + + D +SSL
Sbjct: 177 VGDSLENDILGARALGMKTVWINRGGKPLPDALEAPDYEISSL 219
|
Length = 229 |
| >gnl|CDD|234176 TIGR03351, PhnX-like, phosphonatase-like hydrolase | Back alignment and domain information |
|---|
Score = 44.0 bits (104), Expect = 2e-05
Identities = 52/203 (25%), Positives = 85/203 (41%), Gaps = 31/203 (15%)
Query: 10 ITHVIFDMDGLLLDTEKF-YTEVQELILARYNKTFDWSLKAKMMGKKAIEAAQ-VFVEET 67
I+ V+ DM G +D + Y +++ + A +++ MG+ IEA + + +
Sbjct: 1 ISLVVLDMAGTTVDEDGLVYRALRQAVTAAGLSPTPEEVQSAWMGQSKIEAIRALLAADG 60
Query: 68 GISDKLSA--EDFLVQREETLQTLFPTSE--LMPGASHLIRHLHAKGIPMCVATGSLARH 123
+ A DF EE L + +PGA R L + GI + + TG
Sbjct: 61 ADEAEAQAAFADF----EERLAEAYDDGPPVALPGAEEAFRSLRSSGIKVALTTG----- 111
Query: 124 FELKTQKHRELFSLMHHV--VRGDD-------PEVKQGKPSPDIFLAAAKRFEGGPIDSQ 174
F+ T + L+ + GDD +V G+P+PD+ L A + G D Q
Sbjct: 112 FDRDTAE-----RLLEKLGWTVGDDVDAVVCPSDVAAGRPAPDLILRAMEL--TGVQDVQ 164
Query: 175 EILVFEDAPSGVLAAKNAGMSVV 197
+ V D P+ + A NAG V
Sbjct: 165 SVAVAGDTPNDLEAGINAGAGAV 187
|
This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the substrate is also, like Pald, a 2-oxo-ethylphosphonate. Despite this, the genomic context of members of this family are quite distinct from PhnX, which is almost invariably associated with the 2-aminoethylphosphonate transaminase PhnW (TIGR02326), the source of the substrate Pald. Members of this clade are never associated with PhnW, but rather associate with families of FAD-dependent oxidoreductases related to deaminating amino acid oxidases (pfam01266) as well as zinc-dependent dehydrogenases (pfam00107). Notably, family members from Arthrobacter aurescens TC1 and Nocardia farcinica IFM 10152 are adjacent to the PhnCDE ABC cassette phosphonates transporter (GenProp0236) typically found in association with the phosphonates C-P lyase system (GenProp0232). These observations suggest two possibilities. First, the substrate for this enzyme family is also Pald, the non-association with PhnW not withstanding. Alternatively, the substrate is something very closely related such as hydroxyphosphonoacetaldehyde (Hpald). Hpald could come from oxidative deamination of 1-hydroxy-2-aminoethylphosphonate (HAEP) by the associated oxidase. HAEP would not be a substrate for PhnW due to its high specificity for AEP. HAEP has been shown to be a constituent of the sphingophosphonolipid of Bacteriovorax stolpii, and presumably has other natural sources. If Hpald is the substrate, the product would be glycoaldehyde (hydroxyacetaldehyde), and the associated alcohol dehydrogenase may serve to convert this to glycol. Length = 220 |
| >gnl|CDD|236770 PRK10826, PRK10826, 2-deoxyglucose-6-phosphatase; Provisional | Back alignment and domain information |
|---|
Score = 43.4 bits (103), Expect = 3e-05
Identities = 37/148 (25%), Positives = 63/148 (42%), Gaps = 31/148 (20%)
Query: 92 TSELMPGASHLIRHLHAKGIPMCVATGS--------LARHFELKTQKHRELFSLMH---H 140
T L+PG + A+G+ + +A+ S L F+L R+ F +
Sbjct: 90 TRPLLPGVREALALCKAQGLKIGLASASPLHMLEAVLTM-FDL-----RDYFDALASAEK 143
Query: 141 VVRGDDPEVKQGKPSPDIFLAAAKRFEGGPIDSQEILVFEDAPSGVLAAKNAGMSVVMVP 200
+ KP P+++L A + +D + ED+ +G++AAK A M ++VP
Sbjct: 144 LPY--------SKPHPEVYLNCAAKLG---VDPLTCVALEDSFNGMIAAKAARMRSIVVP 192
Query: 201 DP--RLDSSYHSNADQLLSSLLGFNPKD 226
P + D + + AD L SL D
Sbjct: 193 APEQQNDPRW-ALADVKLESLTELTAAD 219
|
Length = 222 |
| >gnl|CDD|182552 PRK10563, PRK10563, 6-phosphogluconate phosphatase; Provisional | Back alignment and domain information |
|---|
Score = 42.8 bits (101), Expect = 4e-05
Identities = 50/195 (25%), Positives = 88/195 (45%), Gaps = 24/195 (12%)
Query: 10 ITHVIFDMDGLLLDTEKFYTEVQELILARYNKTFDWS-LKAKMMGKKAIEAAQVFVEETG 68
I V FD DG L+D+E + + A + T + + G K E + +E G
Sbjct: 4 IEAVFFDCDGTLVDSEVICSRAYVTMFAEFGITLSLEEVFKRFKGVKLYEIIDIISKEHG 63
Query: 69 ISDKLSAEDF-LVQREETLQTLFPTS-ELMPGASHLIRHLHAKGIPMCVAT-GSLARHFE 125
++ L+ + V R E + LF + E + GA+ L+ + +PMCV + G ++
Sbjct: 64 VT--LAKAELEPVYRAEVAR-LFDSELEPIAGANALLESIT---VPMCVVSNGPVS---- 113
Query: 126 LKTQKHRELFSLMHH----VVRGDDPEVKQGKPSPDIFLAAAKRFEGGPIDSQEILVFED 181
K Q ++H+ + G D +++ KP P + AA+ ++ ILV +D
Sbjct: 114 -KMQHSLGKTGMLHYFPDKLFSGYD--IQRWKPDPALMFHAAEAM-NVNVE-NCILV-DD 167
Query: 182 APSGVLAAKNAGMSV 196
+ +G + AGM V
Sbjct: 168 SSAGAQSGIAAGMEV 182
|
Length = 221 |
| >gnl|CDD|162788 TIGR02254, YjjG/YfnB, HAD superfamily (subfamily IA) hydrolase, TIGR02254 | Back alignment and domain information |
|---|
Score = 41.7 bits (98), Expect = 1e-04
Identities = 41/209 (19%), Positives = 79/209 (37%), Gaps = 26/209 (12%)
Query: 10 ITHVIFDMDGLLLDTEKFYTEVQELILARYNKTFD--------------WSLKAKMMGKK 55
++FD+D +LD + L+ W + GK
Sbjct: 1 YKTLLFDLDDTILDFQAAEALALRLLFEDQGIPLTEDMFAQYKEINQGLWRAYEE--GK- 57
Query: 56 AIEAAQVFVEE-TGISDKLSAE-DFLVQREETLQTLFPTSELMPGASHLIRHLHAKGIPM 113
I +V + + + + E D + ++ L+ L +L+PGA L+ +L K
Sbjct: 58 -ITKDEVVNTRFSALLKEYNTEADEALLNQKYLRFLEEGHQLLPGAFELMENLQQKFRLY 116
Query: 114 CVATGSLARHFELKTQKHRELFSLMHHVVRGDDPEVKQGKPSPDIFLAAAKRFEGGPIDS 173
V G R + K + LF + +D ++ KP +IF A +R
Sbjct: 117 IVTNG--VRETQYKRLRKSGLFPFFDDIFVSEDAGIQ--KPDKEIFNYALERM-PKFSKE 171
Query: 174 QEILVFEDAPSGVLAAKNAGM-SVVMVPD 201
+ +++ + + + +NAG+ + M PD
Sbjct: 172 EVLMIGDSLTADIKGGQNAGLDTCWMNPD 200
|
This family consists of uncharacterized proteobacterial and gram positive bacterial sequences including YjjG from E. coli and YfnB from B. subtilis. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases. Length = 224 |
| >gnl|CDD|130516 TIGR01449, PGP_bact, 2-phosphoglycolate phosphatase, prokaryotic | Back alignment and domain information |
|---|
Score = 41.3 bits (97), Expect = 1e-04
Identities = 47/198 (23%), Positives = 80/198 (40%), Gaps = 25/198 (12%)
Query: 13 VIFDMDGLLLDTEKFYTEVQELILARYNK---TFDW-----SLKAKMMGKKAIEAAQVFV 64
V+FD+DG L+D+ + LA T ++ ++ + A
Sbjct: 1 VLFDLDGTLVDSAPDIAAAVNMALAALGLPPATLARVIGFIGNGVPVLMERVLAWA--GQ 58
Query: 65 EETGISDKLSAEDFLVQREETLQTLFPTSELMPGASHLIRHLHAKGIPMCVATGS---LA 121
E + F EE L + + PG + L AKG+ + + T LA
Sbjct: 59 EPDAQRVAELRKLFDRHYEEVAGEL---TSVFPGVEATLGALRAKGLRLGLVTNKPTPLA 115
Query: 122 RHFELKTQKHRELFSLMHHVVRGDDPEVKQGKPSPDIFLAAAKRFEGGPIDSQEILVFED 181
R L+ + FS+ ++ GD + Q KP PD L AA+R + Q+++ D
Sbjct: 116 RPL-LELLGLAKYFSV---LIGGDS--LAQRKPHPDPLLLAAERLG---VAPQQMVYVGD 166
Query: 182 APSGVLAAKNAGMSVVMV 199
+ + AA+ AG V++
Sbjct: 167 SRVDIQAARAAGCPSVLL 184
|
PGP is an essential enzyme in the glycolate salvage pathway in higher organisms (photorespiration in plants). Phosphoglycolate results from the oxidase activity of RubisCO in the Calvin cycle when concentrations of carbon dioxide are low relative to oxygen. In Ralstonia (Alcaligenes) eutropha and Rhodobacter sphaeroides, the PGP gene (CbbZ) is located on an operon along with other Calvin cycle enzymes including RubisCO. The only other pertinent experimental evidence concerns the gene from E. coli. The in vitro activity of the Ralstonia and Escherichia enzymes was determined with crude cell extracts of strains containing PGP on expression plasmids and compared to controls. In E. coli, however, there does not appear to be a functional Calvin cycle (RubisCO is absent), although the E. coli PGP gene (gph) is on the same operon (dam) with ribulose-5-phosphate-3-epimerase (rpe), a gene in the pentose-phosphate pathway (along with other, unrelated genes). The E. coli enzyme is not expressed under normal laboratory conditions; the pathway to which it belongs has not been determined. In fact, the possibility exists, although unlikely, that the E. coli enzyme and others within this equivalog have as their physiological substrate another, closely related molecule. The other seed chosen for this model, from Xylella fastidiosa has no experimental evidence, but is a plant pathogen and thus may obtain phosphoglycolate from its host. This model has been restricted to encompass only proteobacteria as no related PGP has been verified outside of this clade. Sequences from Aquifex aeolicus and Treponema pallidum fall between the trusted and noise cutoffs. Just below the noise cutoff is a gene which is part of the operon for the biosynthesis of the blue pigment, indigoidine, from Erwinia (Pectobacterium) chrysanthemi, a plant pathogen. It does not seem likely, considering the proposed biosynthetic mechanism, that the dephosphorylation of phosphoglycolate or a closely related compound is required. Possibly, this gene is fortuitously located in this operon, or has an indirect relationship to the necessity for the biosynthesis of this compound. Sequences from 11 species have been annotated as PGP or putative PGP but fall below the noise cutoff. None of these have experimental validation. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702) [Energy metabolism, Sugars]. Length = 213 |
| >gnl|CDD|130521 TIGR01454, AHBA_synth_RP, 3-amino-5-hydroxybenoic acid synthesis related protein | Back alignment and domain information |
|---|
Score = 41.0 bits (96), Expect = 2e-04
Identities = 56/199 (28%), Positives = 84/199 (42%), Gaps = 41/199 (20%)
Query: 13 VIFDMDGLLLDT-----EKF---YTEV---QELILARYNKTFDWSLKAKM--MGKKAIEA 59
V+FD+DG+L+D+ E F Y EV Y + M MG +E
Sbjct: 1 VVFDLDGVLVDSFAVMREAFAIAYREVVGDGPAPFEEYRRHLGRYFPDIMRIMGL-PLEM 59
Query: 60 AQVFVEETGISDKLSAEDFLVQREETLQTLFPTSELMPGASHLIRHLHAKGIPMCVATG- 118
+ FV E S +L+ E E+ PG L+ L A G+ +ATG
Sbjct: 60 EEPFVRE---SYRLAGE----------------VEVFPGVPELLAELRADGVGTAIATGK 100
Query: 119 SLARHFELKTQKHRELFSLMHHVVRGDDPEVKQGKPSPDIFLAAAKRFEGGPIDSQEILV 178
S R L L L HV+ D EV + KP+PDI A + + P ++ ++
Sbjct: 101 SGPRARSLLEA--LGLLPLFDHVIGSD--EVPRPKPAPDIVREALRLLDVPP---EDAVM 153
Query: 179 FEDAPSGVLAAKNAGMSVV 197
DA + + +A+ AG + V
Sbjct: 154 VGDAVTDLASARAAGTATV 172
|
The enzymes in this equivalog are all located in the operons for the biosynthesis of 3-amino-5-hydroxybenoic acid (AHBA), which is a precursor of several antibiotics including ansatrienin , naphthomycin , rifamycin and mitomycin. The role that this enzyme plays in this biosynthesis has not been elucidated. This enzyme is a member of the Haloacid dehalogenase superfamily (pfam00702) of aspartate-nucleophile hydrolases. This enzyme is closely related to phosphoglycolate phosphatase (TIGR01449), but it is unclear what purpose a PGPase or PGPase-like activity would serve in these biosyntheses. This model is limited to the Gram positive Actinobacteria. The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity. Length = 205 |
| >gnl|CDD|215644 PLN03243, PLN03243, haloacid dehalogenase-like hydrolase; Provisional | Back alignment and domain information |
|---|
Score = 41.2 bits (96), Expect = 2e-04
Identities = 46/168 (27%), Positives = 75/168 (44%), Gaps = 19/168 (11%)
Query: 45 WSLKAKMMGKK-----AIEAAQVFVEETGISDKLS-AEDF-----LVQREETLQTLFP-- 91
W A+ GK+ ++ A+ E IS+ L + DF L R+E L
Sbjct: 47 WRALAEEEGKRPPPAFLLKRAEGMKNEQAISEVLCWSRDFLQMKRLAIRKEDLYEYMQGG 106
Query: 92 TSELMPGASHLIRHLHAKGIPMCVATGSLARHFELKTQKHRELFSLMHHVVRGDDPEVKQ 151
L PG+ ++ L IP+ VA+ R+ E + + + V+ +D V +
Sbjct: 107 LYRLRPGSREFVQALKKHEIPIAVASTRPRRYLE-RAIEAVGMEGFFSVVLAAED--VYR 163
Query: 152 GKPSPDIFLAAAKRFEGGPIDSQEILVFEDAPSGVLAAKNAGMSVVMV 199
GKP P++F+ AA+R P + +VF ++ S V AA + M V V
Sbjct: 164 GKPDPEMFMYAAERLGFIP---ERCIVFGNSNSSVEAAHDGCMKCVAV 208
|
Length = 260 |
| >gnl|CDD|162787 TIGR02253, CTE7, HAD superfamily (subfamily IA) hydrolase, TIGR02253 | Back alignment and domain information |
|---|
Score = 40.1 bits (94), Expect = 4e-04
Identities = 44/209 (21%), Positives = 74/209 (35%), Gaps = 33/209 (15%)
Query: 10 ITHVIFDMDGLLLDTEKFYTEVQEL---ILARYNKTFDWSLKAKMMGKKAIEAAQVFVEE 66
I + FD+D L+DT + + +L D+ +A E ++E
Sbjct: 2 IKAIFFDLDDTLIDTSGLAEKARRNAIEVLIEAGLNVDFE--------EAYEELLKLIKE 53
Query: 67 TGISDKLSAEDFLVQR--------------EETLQTLFPTSELMPGASHLIRHLHAKGIP 112
G S+ + D+L++R + F + PG + L G
Sbjct: 54 YG-SNYPTHFDYLIRRLWEEYNPKLVAAFVYAYHKLKFAYLRVYPGVRDTLMELRESGYR 112
Query: 113 MCVATGSLARHFELKTQKHRELFSLMHHVVRGDDPEVKQGKPSPDIFLAAAKRFEGGPID 172
+ + T L K + + V+ + E KP P IF AA KR +
Sbjct: 113 LGIITDGLPVKQWEKL-ERLGVRDFFDAVITSE--EEGVEKPHPKIFYAALKRLG---VK 166
Query: 173 SQEILVFEDAP-SGVLAAKNAGMSVVMVP 200
+E ++ D + AKN GM V +
Sbjct: 167 PEEAVMVGDRLDKDIKGAKNLGMKTVWIN 195
|
This family of sequences from archaea and metazoans includes the human uncharacterized protein CTE7. Pyrococcus species appear to have three different forms of this enzyme, so it is unclear whether all members of this family have the same function. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Length = 221 |
| >gnl|CDD|236770 PRK10826, PRK10826, 2-deoxyglucose-6-phosphatase; Provisional | Back alignment and domain information |
|---|
Score = 38.8 bits (91), Expect = 0.001
Identities = 13/33 (39%), Positives = 21/33 (63%)
Query: 5 SSKKPITHVIFDMDGLLLDTEKFYTEVQELILA 37
S+ + I IFDMDGLL+D+E + + ++A
Sbjct: 2 STPRQILAAIFDMDGLLIDSEPLWDRAELDVMA 34
|
Length = 222 |
| >gnl|CDD|223634 COG0560, SerB, Phosphoserine phosphatase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Score = 38.8 bits (91), Expect = 0.001
Identities = 28/113 (24%), Positives = 40/113 (35%), Gaps = 22/113 (19%)
Query: 13 VIFDMDGLLLDTE-----KFYTEVQELILARYNKTFDWSLKAKMMGKKAIEAAQVFVEET 67
+FD+DG L++ E V E +LA + M G+ E +
Sbjct: 8 AVFDLDGTLINAELIDELARGAGVGEEVLAI--------TERAMRGELDFEESLRLRVAL 59
Query: 68 GISDKLSAEDFLVQREETLQTLFPTSELMPGASHLIRHLHAKGIPMCVATGSL 120
L E REE L L PGA L+ L A G + + +G
Sbjct: 60 LKG--LPVEVLEEVREEFL-------RLTPGAEELVAALKAAGAKVVIISGGF 103
|
Length = 212 |
| >gnl|CDD|233422 TIGR01460, HAD-SF-IIA, Haloacid Dehalogenase Superfamily Class (subfamily) IIA | Back alignment and domain information |
|---|
Score = 37.7 bits (88), Expect = 0.003
Identities = 19/84 (22%), Positives = 38/84 (45%), Gaps = 17/84 (20%)
Query: 116 ATGSLARHFELKTQKHRELFSLMHHVVRGDDPEVKQGKPSPDIFLAAAKRFEGGPIDSQE 175
G++A + + + + GKPSP I+ AA + P + ++
Sbjct: 167 GAGAIAAGIKELSGREPTVV----------------GKPSPAIYRAALNLLQARP-ERRD 209
Query: 176 ILVFEDAPSGVLAAKNAGMSVVMV 199
++V ++ + +L AKNAG ++V
Sbjct: 210 VMVGDNLRTDILGAKNAGFDTLLV 233
|
This model represents one structural subclass of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The superfamily is defined by the presence of three short catalytic motifs. The classes are defined based on the location and the observed or predicted fold of a so-called "capping domain", or the absence of such a domain. Class I consists of sequences in which the capping domain is found in between the first and second catalytic motifs. Class II consists of sequences in which the capping domain is found between the second and third motifs. Class III sequences have no capping domain in iether of these positions. The Class IIA capping domain is predicted by PSI-PRED to consist of a mixed alpha-beta fold with the basic pattern: Helix-Helix-Helix-Sheet-Helix-Loop-Sheet-Helix-Sheet- Helix. Presently, this subfamily encompasses a single equivalog model (TIGR01452) for the eukaryotic phosphoglycolate phosphatase, as well as four hypothetical equivalogs covering closely related sequences (TIGR01456 and TIGR01458 in eukaryotes, TIGR01457 in gram positive bacteria and TIGR01459 in gram negative bacteria). The Escherishia coli NagD gene and the Bacillus subtilus AraL gene are members of this subfamily but are not members of the any of the presently defined equivalogs within it. NagD is part of the NAG operon responsible for N-acetylglucosamine metabolism. The function of this gene is unknown. Genes from several organisms have been annotated as NagD, or NagD-like. However, without data on the presence of other members of this pathway, (such as in the case of Yersinia pestis) these assignments should not be given great weight. The AraL gene is similar: it is part of the L-arabinose operon, but the function is unknown. A gene from Halobacterium has been annotated as AraL, but no other Ara operon genes have been annotated. Many of the genes in this subfamily have been annotated as "pNPPase" "4-nitrophenyl phosphatase" or "NPPase". These all refer to the same activity versus a common lab test compound used to determine phosphatase activity. There is no evidence that this activity is physiologically relevant [Unknown function, Enzymes of unknown specificity]. Length = 236 |
| >gnl|CDD|237336 PRK13288, PRK13288, pyrophosphatase PpaX; Provisional | Back alignment and domain information |
|---|
Score = 36.9 bits (86), Expect = 0.004
Identities = 45/198 (22%), Positives = 75/198 (37%), Gaps = 27/198 (13%)
Query: 10 ITHVIFDMDGLLLDTEKFYTEVQELILARYNKTFDWSLKAKMMGKKAIEAAQVFVEETGI 69
I V+FD+DG L++T ELI++ + T + + + + +T
Sbjct: 3 INTVLFDLDGTLINT-------NELIISSFLHTLKTYYPNQYKREDVLPFIGPSLHDTFS 55
Query: 70 S-DKLSAED-------FLVQREETLQTLFPTSELMPGASHLIRHLHAKGIPMCVATGSLA 121
D+ E+ F + + L T + T ++ L +G + + T +
Sbjct: 56 KIDESKVEEMITTYREFNHEHHDELVTEYETVYET------LKTLKKQGYKLGIVT-TKM 108
Query: 122 RHFELKTQKHRELFSLMHHVVRGDDPEVKQGKPSPDIFLAAAKRFEGGPIDSQEILVFED 181
R K L V+ DD V+ KP P+ L A + P +E L+ D
Sbjct: 109 RDTVEMGLKLTGLDEFFDVVITLDD--VEHAKPDPEPVLKALELLGAKP---EEALMVGD 163
Query: 182 APSGVLAAKNAGMSVVMV 199
+LA KNAG V
Sbjct: 164 NHHDILAGKNAGTKTAGV 181
|
Length = 214 |
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 237 | |||
| PLN02940 | 382 | riboflavin kinase | 100.0 | |
| PRK10826 | 222 | 2-deoxyglucose-6-phosphatase; Provisional | 100.0 | |
| PLN02770 | 248 | haloacid dehalogenase-like hydrolase family protei | 100.0 | |
| TIGR01422 | 253 | phosphonatase phosphonoacetaldehyde hydrolase. Thi | 100.0 | |
| COG0546 | 220 | Gph Predicted phosphatases [General function predi | 100.0 | |
| TIGR03351 | 220 | PhnX-like phosphonatase-like hydrolase. This clade | 100.0 | |
| PRK13288 | 214 | pyrophosphatase PpaX; Provisional | 100.0 | |
| PRK13226 | 229 | phosphoglycolate phosphatase; Provisional | 100.0 | |
| TIGR01449 | 213 | PGP_bact 2-phosphoglycolate phosphatase, prokaryot | 100.0 | |
| PLN03243 | 260 | haloacid dehalogenase-like hydrolase; Provisional | 100.0 | |
| PRK13478 | 267 | phosphonoacetaldehyde hydrolase; Provisional | 100.0 | |
| COG0637 | 221 | Predicted phosphatase/phosphohexomutase [General f | 100.0 | |
| PRK10563 | 221 | 6-phosphogluconate phosphatase; Provisional | 100.0 | |
| PLN02575 | 381 | haloacid dehalogenase-like hydrolase | 100.0 | |
| PRK11587 | 218 | putative phosphatase; Provisional | 100.0 | |
| TIGR02253 | 221 | CTE7 HAD superfamily (subfamily IA) hydrolase, TIG | 100.0 | |
| PRK13223 | 272 | phosphoglycolate phosphatase; Provisional | 100.0 | |
| PLN02811 | 220 | hydrolase | 100.0 | |
| PRK10725 | 188 | fructose-1-P/6-phosphogluconate phosphatase; Provi | 100.0 | |
| TIGR02009 | 185 | PGMB-YQAB-SF beta-phosphoglucomutase family hydrol | 100.0 | |
| TIGR01990 | 185 | bPGM beta-phosphoglucomutase. The enzyme from L. l | 100.0 | |
| TIGR01454 | 205 | AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthes | 100.0 | |
| PRK13222 | 226 | phosphoglycolate phosphatase; Provisional | 100.0 | |
| PRK13225 | 273 | phosphoglycolate phosphatase; Provisional | 99.98 | |
| TIGR02254 | 224 | YjjG/YfnB HAD superfamily (subfamily IA) hydrolase | 99.97 | |
| KOG2914 | 222 | consensus Predicted haloacid-halidohydrolase and r | 99.97 | |
| PRK09449 | 224 | dUMP phosphatase; Provisional | 99.97 | |
| PLN02779 | 286 | haloacid dehalogenase-like hydrolase family protei | 99.97 | |
| PRK10748 | 238 | flavin mononucleotide phosphatase; Provisional | 99.97 | |
| PRK06698 | 459 | bifunctional 5'-methylthioadenosine/S-adenosylhomo | 99.97 | |
| PRK14988 | 224 | GMP/IMP nucleotidase; Provisional | 99.97 | |
| TIGR01428 | 198 | HAD_type_II 2-haloalkanoic acid dehalogenase, type | 99.97 | |
| PF13419 | 176 | HAD_2: Haloacid dehalogenase-like hydrolase; PDB: | 99.97 | |
| PLN02919 | 1057 | haloacid dehalogenase-like hydrolase family protei | 99.97 | |
| TIGR02252 | 203 | DREG-2 REG-2-like, HAD superfamily (subfamily IA) | 99.96 | |
| TIGR01509 | 183 | HAD-SF-IA-v3 haloacid dehalogenase superfamily, su | 99.95 | |
| TIGR02247 | 211 | HAD-1A3-hyp Epoxide hydrolase N-terminal domain-li | 99.95 | |
| TIGR01548 | 197 | HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, | 99.95 | |
| PRK09456 | 199 | ?-D-glucose-1-phosphatase; Provisional | 99.95 | |
| COG1011 | 229 | Predicted hydrolase (HAD superfamily) [General fun | 99.94 | |
| TIGR01993 | 184 | Pyr-5-nucltdase pyrimidine 5'-nucleotidase. These | 99.94 | |
| PHA02597 | 197 | 30.2 hypothetical protein; Provisional | 99.94 | |
| KOG3085 | 237 | consensus Predicted hydrolase (HAD superfamily) [G | 99.93 | |
| TIGR01549 | 154 | HAD-SF-IA-v1 haloacid dehalogenase superfamily, su | 99.93 | |
| TIGR00338 | 219 | serB phosphoserine phosphatase SerB. Phosphoserine | 99.92 | |
| TIGR01493 | 175 | HAD-SF-IA-v2 Haloacid dehalogenase superfamily, su | 99.92 | |
| TIGR01691 | 220 | enolase-ppase 2,3-diketo-5-methylthio-1-phosphopen | 99.91 | |
| PLN02954 | 224 | phosphoserine phosphatase | 99.9 | |
| TIGR01491 | 201 | HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPa | 99.89 | |
| TIGR00213 | 176 | GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase | 99.89 | |
| PRK06769 | 173 | hypothetical protein; Validated | 99.89 | |
| PRK08942 | 181 | D,D-heptose 1,7-bisphosphate phosphatase; Validate | 99.88 | |
| PRK11133 | 322 | serB phosphoserine phosphatase; Provisional | 99.88 | |
| KOG3109 | 244 | consensus Haloacid dehalogenase-like hydrolase [Ge | 99.87 | |
| TIGR01672 | 237 | AphA HAD superfamily (subfamily IIIB) phosphatase, | 99.87 | |
| TIGR01656 | 147 | Histidinol-ppas histidinol-phosphate phosphatase f | 99.86 | |
| TIGR01685 | 174 | MDP-1 magnesium-dependent phosphatase-1. This mode | 99.85 | |
| TIGR01261 | 161 | hisB_Nterm histidinol-phosphatase. This model desc | 99.85 | |
| PRK09552 | 219 | mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosp | 99.83 | |
| PRK13582 | 205 | thrH phosphoserine phosphatase; Provisional | 99.83 | |
| TIGR01662 | 132 | HAD-SF-IIIA HAD-superfamily hydrolase, subfamily I | 99.83 | |
| TIGR01452 | 279 | PGP_euk phosphoglycolate/pyridoxal phosphate phosp | 99.8 | |
| cd01427 | 139 | HAD_like Haloacid dehalogenase-like hydrolases. Th | 99.8 | |
| TIGR01489 | 188 | DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopent | 99.8 | |
| COG0560 | 212 | SerB Phosphoserine phosphatase [Amino acid transpo | 99.79 | |
| TIGR01458 | 257 | HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydr | 99.79 | |
| TIGR02137 | 203 | HSK-PSP phosphoserine phosphatase/homoserine phosp | 99.78 | |
| TIGR01664 | 166 | DNA-3'-Pase DNA 3'-phosphatase. The central phosph | 99.77 | |
| TIGR01490 | 202 | HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrol | 99.76 | |
| TIGR03333 | 214 | salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl | 99.76 | |
| PRK11009 | 237 | aphA acid phosphatase/phosphotransferase; Provisio | 99.75 | |
| PRK05446 | 354 | imidazole glycerol-phosphate dehydratase/histidino | 99.75 | |
| TIGR01488 | 177 | HAD-SF-IB Haloacid Dehalogenase superfamily, subfa | 99.74 | |
| TIGR01668 | 170 | YqeG_hyp_ppase HAD superfamily (subfamily IIIA) ph | 99.74 | |
| TIGR01457 | 249 | HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydr | 99.73 | |
| PRK10444 | 248 | UMP phosphatase; Provisional | 99.72 | |
| PF00702 | 215 | Hydrolase: haloacid dehalogenase-like hydrolase; I | 99.72 | |
| TIGR01681 | 128 | HAD-SF-IIIC HAD-superfamily phosphatase, subfamily | 99.7 | |
| COG4229 | 229 | Predicted enolase-phosphatase [Energy production a | 99.7 | |
| PLN02645 | 311 | phosphoglycolate phosphatase | 99.7 | |
| COG2179 | 175 | Predicted hydrolase of the HAD superfamily [Genera | 99.69 | |
| PRK11590 | 211 | hypothetical protein; Provisional | 99.66 | |
| TIGR01670 | 154 | YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-pho | 99.66 | |
| PRK10530 | 272 | pyridoxal phosphate (PLP) phosphatase; Provisional | 99.64 | |
| PRK09484 | 183 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphata | 99.63 | |
| COG0647 | 269 | NagD Predicted sugar phosphatases of the HAD super | 99.62 | |
| PF06888 | 234 | Put_Phosphatase: Putative Phosphatase; InterPro: I | 99.6 | |
| TIGR01459 | 242 | HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolas | 99.59 | |
| PF13242 | 75 | Hydrolase_like: HAD-hyrolase-like; PDB: 2P27_A 2OY | 99.58 | |
| PHA02530 | 300 | pseT polynucleotide kinase; Provisional | 99.57 | |
| PRK08238 | 479 | hypothetical protein; Validated | 99.55 | |
| TIGR01456 | 321 | CECR5 HAD-superfamily class IIA hydrolase, TIGR014 | 99.54 | |
| TIGR01460 | 236 | HAD-SF-IIA Haloacid Dehalogenase Superfamily Class | 99.54 | |
| COG0241 | 181 | HisB Histidinol phosphatase and related phosphatas | 99.53 | |
| TIGR01686 | 320 | FkbH FkbH-like domain. The C-terminal portion of t | 99.52 | |
| smart00577 | 148 | CPDc catalytic domain of ctd-like phosphatases. | 99.5 | |
| TIGR01544 | 277 | HAD-SF-IE haloacid dehalogenase superfamily, subfa | 99.5 | |
| PRK01158 | 230 | phosphoglycolate phosphatase; Provisional | 99.5 | |
| PF12689 | 169 | Acid_PPase: Acid Phosphatase; InterPro: IPR010036 | 99.49 | |
| KOG1615 | 227 | consensus Phosphoserine phosphatase [Amino acid tr | 99.49 | |
| TIGR01545 | 210 | YfhB_g-proteo haloacid dehalogenase superfamily, s | 99.48 | |
| TIGR02726 | 169 | phenyl_P_delta phenylphosphate carboxylase, delta | 99.48 | |
| TIGR02244 | 343 | HAD-IG-Ncltidse HAD superfamily (subfamily IG) hyd | 99.48 | |
| TIGR01663 | 526 | PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase | 99.44 | |
| COG0561 | 264 | Cof Predicted hydrolases of the HAD superfamily [G | 99.43 | |
| KOG2882 | 306 | consensus p-Nitrophenyl phosphatase [Inorganic ion | 99.42 | |
| TIGR01482 | 225 | SPP-subfamily Sucrose-phosphate phosphatase subfam | 99.41 | |
| PRK15126 | 272 | thiamin pyrimidine pyrophosphate hydrolase; Provis | 99.38 | |
| TIGR01487 | 215 | SPP-like sucrose-phosphate phosphatase-like hydrol | 99.38 | |
| PRK10513 | 270 | sugar phosphate phosphatase; Provisional | 99.37 | |
| KOG3040 | 262 | consensus Predicted sugar phosphatase (HAD superfa | 99.34 | |
| KOG3120 | 256 | consensus Predicted haloacid dehalogenase-like hyd | 99.33 | |
| PRK10976 | 266 | putative hydrolase; Provisional | 99.32 | |
| PF09419 | 168 | PGP_phosphatase: Mitochondrial PGP phosphatase; In | 99.31 | |
| PTZ00445 | 219 | p36-lilke protein; Provisional | 99.3 | |
| PF12710 | 192 | HAD: haloacid dehalogenase-like hydrolase; PDB: 3P | 99.29 | |
| PLN02887 | 580 | hydrolase family protein | 99.28 | |
| COG1778 | 170 | Low specificity phosphatase (HAD superfamily) [Gen | 99.25 | |
| TIGR01533 | 266 | lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) famil | 99.25 | |
| PRK00192 | 273 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 99.25 | |
| PRK03669 | 271 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 99.23 | |
| PF08645 | 159 | PNK3P: Polynucleotide kinase 3 phosphatase; InterP | 99.2 | |
| COG4359 | 220 | Uncharacterized conserved protein [Function unknow | 99.17 | |
| TIGR02463 | 221 | MPGP_rel mannosyl-3-phosphoglycerate phosphatase-r | 99.16 | |
| TIGR00099 | 256 | Cof-subfamily Cof subfamily of IIB subfamily of ha | 99.16 | |
| TIGR01512 | 536 | ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translo | 99.11 | |
| PF06941 | 191 | NT5C: 5' nucleotidase, deoxy (Pyrimidine), cytosol | 99.1 | |
| TIGR01684 | 301 | viral_ppase viral phosphatase. These proteins also | 99.08 | |
| TIGR02471 | 236 | sucr_syn_bact_C sucrose phosphate synthase, sucros | 99.06 | |
| PF08282 | 254 | Hydrolase_3: haloacid dehalogenase-like hydrolase; | 99.05 | |
| TIGR01525 | 556 | ATPase-IB_hvy heavy metal translocating P-type ATP | 99.05 | |
| TIGR01485 | 249 | SPP_plant-cyano sucrose-6F-phosphate phosphohydrol | 99.02 | |
| TIGR01486 | 256 | HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosph | 98.97 | |
| KOG2630 | 254 | consensus Enolase-phosphatase E-1 [Amino acid tran | 98.96 | |
| TIGR01511 | 562 | ATPase-IB1_Cu copper-(or silver)-translocating P-t | 98.93 | |
| TIGR02461 | 225 | osmo_MPG_phos mannosyl-3-phosphoglycerate phosphat | 98.91 | |
| TIGR02251 | 162 | HIF-SF_euk Dullard-like phosphatase domain. This d | 98.91 | |
| TIGR01522 | 884 | ATPase-IIA2_Ca golgi membrane calcium-translocatin | 98.9 | |
| COG4087 | 152 | Soluble P-type ATPase [General function prediction | 98.89 | |
| PHA03398 | 303 | viral phosphatase superfamily protein; Provisional | 98.82 | |
| TIGR01459 | 242 | HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolas | 98.8 | |
| PRK14502 | 694 | bifunctional mannosyl-3-phosphoglycerate synthase/ | 98.76 | |
| COG4996 | 164 | Predicted phosphatase [General function prediction | 98.74 | |
| PRK10671 | 834 | copA copper exporting ATPase; Provisional | 98.73 | |
| PF13344 | 101 | Hydrolase_6: Haloacid dehalogenase-like hydrolase; | 98.72 | |
| smart00775 | 157 | LNS2 LNS2 domain. This domain is found in Saccharo | 98.7 | |
| PRK10187 | 266 | trehalose-6-phosphate phosphatase; Provisional | 98.7 | |
| PLN02382 | 413 | probable sucrose-phosphatase | 98.68 | |
| COG3700 | 237 | AphA Acid phosphatase (class B) [General function | 98.67 | |
| TIGR01675 | 229 | plant-AP plant acid phosphatase. This model explic | 98.67 | |
| PF03767 | 229 | Acid_phosphat_B: HAD superfamily, subfamily IIIB ( | 98.6 | |
| PLN02177 | 497 | glycerol-3-phosphate acyltransferase | 98.6 | |
| TIGR01116 | 917 | ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium | 98.57 | |
| PF11019 | 252 | DUF2608: Protein of unknown function (DUF2608); In | 98.56 | |
| PRK14010 | 673 | potassium-transporting ATPase subunit B; Provision | 98.52 | |
| COG2217 | 713 | ZntA Cation transport ATPase [Inorganic ion transp | 98.49 | |
| PRK12702 | 302 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 98.48 | |
| PRK11033 | 741 | zntA zinc/cadmium/mercury/lead-transporting ATPase | 98.48 | |
| TIGR01680 | 275 | Veg_Stor_Prot vegetative storage protein. The prot | 98.48 | |
| PRK01122 | 679 | potassium-transporting ATPase subunit B; Provision | 98.47 | |
| TIGR01497 | 675 | kdpB K+-transporting ATPase, B subunit. One sequen | 98.43 | |
| PF05116 | 247 | S6PP: Sucrose-6F-phosphate phosphohydrolase; Inter | 98.4 | |
| PTZ00174 | 247 | phosphomannomutase; Provisional | 98.39 | |
| TIGR01517 | 941 | ATPase-IIB_Ca plasma-membrane calcium-translocatin | 98.36 | |
| TIGR01524 | 867 | ATPase-IIIB_Mg magnesium-translocating P-type ATPa | 98.34 | |
| PRK15122 | 903 | magnesium-transporting ATPase; Provisional | 98.34 | |
| PRK10517 | 902 | magnesium-transporting ATPase MgtA; Provisional | 98.32 | |
| PF05761 | 448 | 5_nucleotid: 5' nucleotidase family; InterPro: IPR | 98.3 | |
| TIGR01647 | 755 | ATPase-IIIA_H plasma-membrane proton-efflux P-type | 98.3 | |
| TIGR01523 | 1053 | ATPase-IID_K-Na potassium and/or sodium efflux P-t | 98.24 | |
| COG5663 | 194 | Uncharacterized conserved protein [Function unknow | 98.13 | |
| PLN02645 | 311 | phosphoglycolate phosphatase | 98.06 | |
| COG2503 | 274 | Predicted secreted acid phosphatase [General funct | 98.04 | |
| COG0474 | 917 | MgtA Cation transport ATPase [Inorganic ion transp | 98.02 | |
| KOG0202 | 972 | consensus Ca2+ transporting ATPase [Inorganic ion | 98.02 | |
| TIGR00685 | 244 | T6PP trehalose-phosphatase. At least 18 distinct s | 98.0 | |
| PLN02423 | 245 | phosphomannomutase | 98.0 | |
| TIGR01106 | 997 | ATPase-IIC_X-K sodium or proton efflux -- potassiu | 97.95 | |
| KOG0207 | 951 | consensus Cation transport ATPase [Inorganic ion t | 97.94 | |
| PF05152 | 297 | DUF705: Protein of unknown function (DUF705); Inte | 97.85 | |
| TIGR01484 | 204 | HAD-SF-IIB HAD-superfamily hydrolase, subfamily II | 97.83 | |
| TIGR02250 | 156 | FCP1_euk FCP1-like phosphatase, phosphatase domain | 97.81 | |
| TIGR01652 | 1057 | ATPase-Plipid phospholipid-translocating P-type AT | 97.76 | |
| PF08235 | 157 | LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 | 97.67 | |
| TIGR01689 | 126 | EcbF-BcbF capsule biosynthesis phosphatase. Due to | 97.62 | |
| TIGR01657 | 1054 | P-ATPase-V P-type ATPase of unknown pump specifici | 97.62 | |
| TIGR01658 | 274 | EYA-cons_domain eyes absent protein conserved doma | 97.61 | |
| COG5610 | 635 | Predicted hydrolase (HAD superfamily) [General fun | 97.54 | |
| TIGR02245 | 195 | HAD_IIID1 HAD-superfamily subfamily IIID hydrolase | 97.48 | |
| COG0647 | 269 | NagD Predicted sugar phosphatases of the HAD super | 97.47 | |
| PLN03190 | 1178 | aminophospholipid translocase; Provisional | 97.43 | |
| KOG2470 | 510 | consensus Similar to IMP-GMP specific 5'-nucleotid | 97.4 | |
| TIGR01494 | 499 | ATPase_P-type ATPase, P-type (transporting), HAD s | 97.29 | |
| PLN02499 | 498 | glycerol-3-phosphate acyltransferase | 97.16 | |
| TIGR01452 | 279 | PGP_euk phosphoglycolate/pyridoxal phosphate phosp | 97.15 | |
| COG4030 | 315 | Uncharacterized protein conserved in archaea [Func | 96.97 | |
| COG3769 | 274 | Predicted hydrolase (HAD superfamily) [General fun | 96.92 | |
| KOG2961 | 190 | consensus Predicted hydrolase (HAD superfamily) [G | 96.89 | |
| KOG1618 | 389 | consensus Predicted phosphatase [General function | 96.88 | |
| KOG3128 | 298 | consensus Uncharacterized conserved protein [Funct | 96.86 | |
| COG2216 | 681 | KdpB High-affinity K+ transport system, ATPase cha | 96.79 | |
| PF05822 | 246 | UMPH-1: Pyrimidine 5'-nucleotidase (UMPH-1); Inter | 96.76 | |
| PF06189 | 264 | 5-nucleotidase: 5'-nucleotidase; InterPro: IPR0103 | 96.75 | |
| KOG3107 | 468 | consensus Predicted haloacid dehalogenase-like hyd | 96.73 | |
| KOG0204 | 1034 | consensus Calcium transporting ATPase [Inorganic i | 96.57 | |
| PF03031 | 159 | NIF: NLI interacting factor-like phosphatase; Inte | 96.56 | |
| KOG0206 | 1151 | consensus P-type ATPase [General function predicti | 96.42 | |
| KOG0210 | 1051 | consensus P-type ATPase [Inorganic ion transport a | 96.21 | |
| TIGR01457 | 249 | HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydr | 96.12 | |
| PRK14501 | 726 | putative bifunctional trehalose-6-phosphate syntha | 96.01 | |
| COG3882 | 574 | FkbH Predicted enzyme involved in methoxymalonyl-A | 96.0 | |
| PRK10444 | 248 | UMP phosphatase; Provisional | 95.25 | |
| COG4502 | 180 | 5'(3')-deoxyribonucleotidase [Nucleotide transport | 95.2 | |
| PLN02580 | 384 | trehalose-phosphatase | 95.06 | |
| KOG4549 | 144 | consensus Magnesium-dependent phosphatase [General | 94.69 | |
| TIGR01460 | 236 | HAD-SF-IIA Haloacid Dehalogenase Superfamily Class | 94.62 | |
| PLN02205 | 854 | alpha,alpha-trehalose-phosphate synthase [UDP-form | 94.6 | |
| TIGR01484 | 204 | HAD-SF-IIB HAD-superfamily hydrolase, subfamily II | 94.38 | |
| KOG2134 | 422 | consensus Polynucleotide kinase 3' phosphatase [Re | 94.36 | |
| TIGR02726 | 169 | phenyl_P_delta phenylphosphate carboxylase, delta | 94.25 | |
| TIGR01458 | 257 | HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydr | 93.98 | |
| PLN02580 | 384 | trehalose-phosphatase | 93.68 | |
| TIGR01456 | 321 | CECR5 HAD-superfamily class IIA hydrolase, TIGR014 | 93.2 | |
| PRK14501 | 726 | putative bifunctional trehalose-6-phosphate syntha | 93.12 | |
| KOG2469 | 424 | consensus IMP-GMP specific 5'-nucleotidase [Nucleo | 92.94 | |
| PF13580 | 138 | SIS_2: SIS domain; PDB: 1TK9_C 2I22_B 2I2W_A 1X92_ | 92.8 | |
| PLN02205 | 854 | alpha,alpha-trehalose-phosphate synthase [UDP-form | 92.77 | |
| KOG0203 | 1019 | consensus Na+/K+ ATPase, alpha subunit [Inorganic | 91.41 | |
| PF03031 | 159 | NIF: NLI interacting factor-like phosphatase; Inte | 91.37 | |
| TIGR02468 | 1050 | sucrsPsyn_pln sucrose phosphate synthase/possible | 90.82 | |
| KOG2882 | 306 | consensus p-Nitrophenyl phosphatase [Inorganic ion | 90.18 | |
| KOG3040 | 262 | consensus Predicted sugar phosphatase (HAD superfa | 89.47 | |
| KOG2116 | 738 | consensus Protein involved in plasmid maintenance/ | 89.11 | |
| KOG0209 | 1160 | consensus P-type ATPase [Inorganic ion transport a | 89.02 | |
| PLN03017 | 366 | trehalose-phosphatase | 87.97 | |
| TIGR00685 | 244 | T6PP trehalose-phosphatase. At least 18 distinct s | 87.93 | |
| PLN02151 | 354 | trehalose-phosphatase | 87.73 | |
| PF06014 | 62 | DUF910: Bacterial protein of unknown function (DUF | 87.19 | |
| CHL00162 | 267 | thiG thiamin biosynthesis protein G; Validated | 86.84 | |
| PF05690 | 247 | ThiG: Thiazole biosynthesis protein ThiG; InterPro | 86.73 | |
| PRK10513 | 270 | sugar phosphate phosphatase; Provisional | 86.38 | |
| PTZ00445 | 219 | p36-lilke protein; Provisional | 86.37 | |
| PF02358 | 235 | Trehalose_PPase: Trehalose-phosphatase; InterPro: | 85.94 | |
| PLN03017 | 366 | trehalose-phosphatase | 85.82 | |
| PLN03063 | 797 | alpha,alpha-trehalose-phosphate synthase (UDP-form | 85.65 | |
| PLN02151 | 354 | trehalose-phosphatase | 85.28 | |
| PRK00192 | 273 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 85.26 | |
| KOG3189 | 252 | consensus Phosphomannomutase [Lipid transport and | 84.77 | |
| TIGR02461 | 225 | osmo_MPG_phos mannosyl-3-phosphoglycerate phosphat | 84.72 | |
| KOG0323 | 635 | consensus TFIIF-interacting CTD phosphatases, incl | 84.57 | |
| COG4850 | 373 | Uncharacterized conserved protein [Function unknow | 84.04 | |
| TIGR01487 | 215 | SPP-like sucrose-phosphate phosphatase-like hydrol | 83.83 | |
| PRK01158 | 230 | phosphoglycolate phosphatase; Provisional | 82.78 | |
| COG0731 | 296 | Fe-S oxidoreductases [Energy production and conver | 82.68 | |
| PF04413 | 186 | Glycos_transf_N: 3-Deoxy-D-manno-octulosonic-acid | 82.65 | |
| TIGR02463 | 221 | MPGP_rel mannosyl-3-phosphoglycerate phosphatase-r | 82.02 | |
| TIGR02329 | 526 | propionate_PrpR propionate catabolism operon regul | 80.96 | |
| COG5083 | 580 | SMP2 Uncharacterized protein involved in plasmid m | 80.92 | |
| TIGR00099 | 256 | Cof-subfamily Cof subfamily of IIB subfamily of ha | 80.92 | |
| PRK12702 | 302 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 80.7 | |
| PRK15126 | 272 | thiamin pyrimidine pyrophosphate hydrolase; Provis | 80.32 | |
| PRK10976 | 266 | putative hydrolase; Provisional | 80.1 |
| >PLN02940 riboflavin kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-35 Score=238.40 Aligned_cols=220 Identities=40% Similarity=0.692 Sum_probs=189.7
Q ss_pred CCccEEEEecCcccccchhhHHHHHHHHHHHcCCCCCHHHHHHhcCCChHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHH
Q 026543 8 KPITHVIFDMDGLLLDTEKFYTEVQELILARYNKTFDWSLKAKMMGKKAIEAAQVFVEETGISDKLSAEDFLVQREETLQ 87 (237)
Q Consensus 8 ~~~~~vifD~DGTL~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (237)
..+++|+||+||||+|+...+..++..+++++|...+.+......|.+..+.+..++.+++++ ...+++...+...+.
T Consensus 9 ~~ik~VIFDlDGTLvDt~~~~~~a~~~~~~~~G~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~ 86 (382)
T PLN02940 9 KLVSHVILDLDGTLLNTDGIVSDVLKAFLVKYGKQWDGREAQKIVGKTPLEAAATVVEDYGLP--CSTDEFNSEITPLLS 86 (382)
T ss_pred ccCCEEEECCcCcCCcCHHHHHHHHHHHHHHcCCCCCHHHHHHhcCCCHHHHHHHHHHHhCCC--CCHHHHHHHHHHHHH
Confidence 458999999999999999999999999999999987777777888888888888888888876 566666666655555
Q ss_pred hhcCCCCCCccHHHHHHHHHhCCCCEEEEeCChhhHHHHHHhhhhhhhhhcceeeeCCCCCccCCCCCHHHHHHHHHHcC
Q 026543 88 TLFPTSELMPGASHLIRHLHAKGIPMCVATGSLARHFELKTQKHRELFSLMHHVVRGDDPEVKQGKPSPDIFLAAAKRFE 167 (237)
Q Consensus 88 ~~~~~~~~~~~~~~~l~~l~~~g~~v~i~s~~~~~~~~~~~~~~~gl~~~f~~~~~~~~~~~~~~kp~~~~~~~~l~~~~ 167 (237)
+......++||+.++|+.|+++|++++|+||.....+...+.+..|+..+|+.+++++ +....||+|+.|..++++++
T Consensus 87 ~~~~~~~l~pGv~elL~~Lk~~g~~l~IvTn~~~~~~~~~l~~~~gl~~~Fd~ii~~d--~v~~~KP~p~~~~~a~~~lg 164 (382)
T PLN02940 87 EQWCNIKALPGANRLIKHLKSHGVPMALASNSPRANIEAKISCHQGWKESFSVIVGGD--EVEKGKPSPDIFLEAAKRLN 164 (382)
T ss_pred HHHccCCCCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHhccChHhhCCEEEehh--hcCCCCCCHHHHHHHHHHcC
Confidence 5556688999999999999999999999999777665544334678999999999999 88889999999999999999
Q ss_pred CCCCCCCcEEEEecCHHHHHHHHHcCCeEEEEcCCCCCcccccchhhhhhhhcccCCCCCCCCCCCC
Q 026543 168 GGPIDSQEILVFEDAPSGVLAAKNAGMSVVMVPDPRLDSSYHSNADQLLSSLLGFNPKDWGLPPFED 234 (237)
Q Consensus 168 ~~~~~~~~~~~igD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~~~~el~~~l~~l~~~~~ 234 (237)
++|++|++|||+.+|+++|+++|+.+|+|.++.........++.+++++.|+...-++|||+.+
T Consensus 165 ---v~p~~~l~VGDs~~Di~aA~~aGi~~I~v~~g~~~~~~~~~ad~~i~sl~el~~~~~~~~~~~~ 228 (382)
T PLN02940 165 ---VEPSNCLVIEDSLPGVMAGKAAGMEVIAVPSIPKQTHLYSSADEVINSLLDLQPEKWGLPPFND 228 (382)
T ss_pred ---CChhHEEEEeCCHHHHHHHHHcCCEEEEECCCCcchhhccCccEEeCCHhHcCHHHcCCCCccc
Confidence 9999999999999999999999999999998755443456789999999999988889998865
|
|
| >PRK10826 2-deoxyglucose-6-phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.1e-34 Score=216.05 Aligned_cols=211 Identities=22% Similarity=0.361 Sum_probs=169.2
Q ss_pred CCccEEEEecCcccccchhhHHHHHHHHHHHcCCCCCH-HHHHHhcCCChHHHHHHHHHHhCCCCCCCHHHH-HHHHHHH
Q 026543 8 KPITHVIFDMDGLLLDTEKFYTEVQELILARYNKTFDW-SLKAKMMGKKAIEAAQVFVEETGISDKLSAEDF-LVQREET 85 (237)
Q Consensus 8 ~~~~~vifD~DGTL~~~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 85 (237)
.++++|+||+||||+++...+..++.++++++|..... +.+....|.......+.+....+... ...... ....+..
T Consensus 5 ~~~k~iiFD~DGTL~d~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 83 (222)
T PRK10826 5 RQILAAIFDMDGLLIDSEPLWDRAELDVMASLGVDISRREELPDTLGLRIDQVVDLWYARQPWNG-PSRQEVVQRIIARV 83 (222)
T ss_pred ccCcEEEEcCCCCCCcCHHHHHHHHHHHHHHCCCCCCHHHHHHHhhCCCHHHHHHHHHHhcCCCC-CCHHHHHHHHHHHH
Confidence 35899999999999999999999999999999987665 55566777776666665555443321 222333 2333333
Q ss_pred HHhhcCCCCCCccHHHHHHHHHhCCCCEEEEeCChhhHHHHHHhhhhhhhhhcceeeeCCCCCccCCCCCHHHHHHHHHH
Q 026543 86 LQTLFPTSELMPGASHLIRHLHAKGIPMCVATGSLARHFELKTQKHRELFSLMHHVVRGDDPEVKQGKPSPDIFLAAAKR 165 (237)
Q Consensus 86 ~~~~~~~~~~~~~~~~~l~~l~~~g~~v~i~s~~~~~~~~~~~~~~~gl~~~f~~~~~~~~~~~~~~kp~~~~~~~~l~~ 165 (237)
.+.......++||+.++|..|+++|++++|+||+...... ..++.+++..+|+.+++++ ..+.+||+++.++.++++
T Consensus 84 ~~~~~~~~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~-~~l~~~~l~~~f~~~~~~~--~~~~~Kp~~~~~~~~~~~ 160 (222)
T PRK10826 84 ISLIEETRPLLPGVREALALCKAQGLKIGLASASPLHMLE-AVLTMFDLRDYFDALASAE--KLPYSKPHPEVYLNCAAK 160 (222)
T ss_pred HHHHhcCCCCCCCHHHHHHHHHHCCCeEEEEeCCcHHHHH-HHHHhCcchhcccEEEEcc--cCCCCCCCHHHHHHHHHH
Confidence 3334456789999999999999999999999997665554 5678889999999999998 888899999999999999
Q ss_pred cCCCCCCCCcEEEEecCHHHHHHHHHcCCeEEEEcCCCCCc-ccccchhhhhhhhcccCCC
Q 026543 166 FEGGPIDSQEILVFEDAPSGVLAAKNAGMSVVMVPDPRLDS-SYHSNADQLLSSLLGFNPK 225 (237)
Q Consensus 166 ~~~~~~~~~~~~~igD~~~Di~~a~~~G~~~i~v~~~~~~~-~~~~~~~~~~~~~~el~~~ 225 (237)
+| ++|++|++|||+.+|+++|+++|+++|++..+.... .....++.++.++.|+..+
T Consensus 161 ~~---~~~~~~~~igDs~~Di~aA~~aG~~~i~v~~~~~~~~~~~~~~~~~~~~~~dl~~~ 218 (222)
T PRK10826 161 LG---VDPLTCVALEDSFNGMIAAKAARMRSIVVPAPEQQNDPRWALADVKLESLTELTAA 218 (222)
T ss_pred cC---CCHHHeEEEcCChhhHHHHHHcCCEEEEecCCccCchhhhhhhheeccCHHHHhhh
Confidence 99 999999999999999999999999999998876532 3345789999999998544
|
|
| >PLN02770 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-34 Score=219.80 Aligned_cols=209 Identities=22% Similarity=0.314 Sum_probs=162.3
Q ss_pred CCCCCccEEEEecCcccccchhhHHHHHHHHHHHcCC----CCCHHHH-HHhcCCChHHHHHHHHHHhCCCCCCCHHHHH
Q 026543 5 SSKKPITHVIFDMDGLLLDTEKFYTEVQELILARYNK----TFDWSLK-AKMMGKKAIEAAQVFVEETGISDKLSAEDFL 79 (237)
Q Consensus 5 ~~~~~~~~vifD~DGTL~~~~~~~~~~~~~~~~~~g~----~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (237)
+.+.++++|+|||||||+|+...+..++..+++++|. +...+.+ ..+.|.+....+..+... ... ....+.
T Consensus 17 ~~~~~~k~viFDlDGTLiDs~~~~~~a~~~~~~~~g~~~g~~~~~~~~~~~~~G~~~~~~~~~~~~~-~~~---~~~~~~ 92 (248)
T PLN02770 17 SGLAPLEAVLFDVDGTLCDSDPLHYYAFREMLQEINFNGGVPITEEFFVENIAGKHNEDIALGLFPD-DLE---RGLKFT 92 (248)
T ss_pred cccCccCEEEEcCCCccCcCHHHHHHHHHHHHHHhccccCCCCCHHHHHHHcCCCCHHHHHHHHcCc-chh---hHHHHH
Confidence 3456789999999999999999999999999999864 3444443 345676666555444321 110 111122
Q ss_pred HHHHHHHHhh-cCCCCCCccHHHHHHHHHhCCCCEEEEeCChhhHHHHHHhhhhhhhhhcceeeeCCCCCccCCCCCHHH
Q 026543 80 VQREETLQTL-FPTSELMPGASHLIRHLHAKGIPMCVATGSLARHFELKTQKHRELFSLMHHVVRGDDPEVKQGKPSPDI 158 (237)
Q Consensus 80 ~~~~~~~~~~-~~~~~~~~~~~~~l~~l~~~g~~v~i~s~~~~~~~~~~~~~~~gl~~~f~~~~~~~~~~~~~~kp~~~~ 158 (237)
..+...+... .+...++||+.++|+.|+++|++++|+||+....+. ..++.+|+..+|+.+++++ +....||+|+.
T Consensus 93 ~~~~~~y~~~~~~~~~l~pgv~e~L~~L~~~g~~l~I~Tn~~~~~~~-~~l~~~gl~~~Fd~iv~~~--~~~~~KP~p~~ 169 (248)
T PLN02770 93 DDKEALFRKLASEQLKPLNGLYKLKKWIEDRGLKRAAVTNAPRENAE-LMISLLGLSDFFQAVIIGS--ECEHAKPHPDP 169 (248)
T ss_pred HHHHHHHHHHHHhcCCcCccHHHHHHHHHHcCCeEEEEeCCCHHHHH-HHHHHcCChhhCcEEEecC--cCCCCCCChHH
Confidence 2233333332 245789999999999999999999999997766555 5678889999999999999 88889999999
Q ss_pred HHHHHHHcCCCCCCCCcEEEEecCHHHHHHHHHcCCeEEEEcCCCCCc-ccccchhhhhhhhcccC
Q 026543 159 FLAAAKRFEGGPIDSQEILVFEDAPSGVLAAKNAGMSVVMVPDPRLDS-SYHSNADQLLSSLLGFN 223 (237)
Q Consensus 159 ~~~~l~~~~~~~~~~~~~~~igD~~~Di~~a~~~G~~~i~v~~~~~~~-~~~~~~~~~~~~~~el~ 223 (237)
|..++++++ ++|++|++|||+..|+++|+++|+.+|+|.++.... .....++++++++.|+.
T Consensus 170 ~~~a~~~~~---~~~~~~l~vgDs~~Di~aA~~aGi~~i~v~~g~~~~~l~~~~a~~vi~~~~e~~ 232 (248)
T PLN02770 170 YLKALEVLK---VSKDHTFVFEDSVSGIKAGVAAGMPVVGLTTRNPESLLMEAKPTFLIKDYEDPK 232 (248)
T ss_pred HHHHHHHhC---CChhHEEEEcCCHHHHHHHHHCCCEEEEEeCCCCHHHHhhcCCCEEeccchhhH
Confidence 999999999 999999999999999999999999999998875422 23457899999999843
|
|
| >TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.5e-34 Score=218.12 Aligned_cols=208 Identities=21% Similarity=0.218 Sum_probs=162.9
Q ss_pred ccEEEEecCcccccchhh-HHHHHHHHHHHcCCCCCHHHHHHhcCCChHHHHH----------HHHHHhCCCCCCCHHHH
Q 026543 10 ITHVIFDMDGLLLDTEKF-YTEVQELILARYNKTFDWSLKAKMMGKKAIEAAQ----------VFVEETGISDKLSAEDF 78 (237)
Q Consensus 10 ~~~vifD~DGTL~~~~~~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~ 78 (237)
+++|+|||||||+|+... +..++..+++++|.+.+.+......|.+....++ .+...++.. ...+.+
T Consensus 2 ~k~viFD~DGTLiDs~~~~~~~a~~~~~~~~g~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~ 79 (253)
T TIGR01422 2 IEAVIFDWAGTTVDFGSFAPTQAFVEAFAEFGVQITLEEARGPMGLGKWDHIRALLKMPAVAERWRAKFGRL--PTEADI 79 (253)
T ss_pred ceEEEEeCCCCeecCCCccHHHHHHHHHHHcCCCccHHHHHHhcCccHHHHHHHHhcCHHHHHHHHHHhCCC--CCHHHH
Confidence 689999999999998653 5788999999999877777776667766543332 334455554 333333
Q ss_pred HH---HHHHHH-HhhcCCCCCCccHHHHHHHHHhCCCCEEEEeCChhhHHHHHHhhhhhhhhhc-ceeeeCCCCCccCCC
Q 026543 79 LV---QREETL-QTLFPTSELMPGASHLIRHLHAKGIPMCVATGSLARHFELKTQKHRELFSLM-HHVVRGDDPEVKQGK 153 (237)
Q Consensus 79 ~~---~~~~~~-~~~~~~~~~~~~~~~~l~~l~~~g~~v~i~s~~~~~~~~~~~~~~~gl~~~f-~~~~~~~~~~~~~~k 153 (237)
.. .+...+ +.......++||+.++|+.|+++|++++|+||+...... ..++.+|+..+| +.+++++ +....|
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~pg~~e~L~~L~~~g~~l~IvT~~~~~~~~-~~l~~~gl~~~f~d~ii~~~--~~~~~K 156 (253)
T TIGR01422 80 EAIYEAFEPLQLAKLAEYSSPIPGVIEVIAYLRARGIKIGSTTGYTREMMD-VVAPEAALQGYRPDYNVTTD--DVPAGR 156 (253)
T ss_pred HHHHHHHHHHHHHHHHhcCccCCCHHHHHHHHHHCCCeEEEECCCcHHHHH-HHHHHHHhcCCCCceEEccc--cCCCCC
Confidence 33 232222 223345789999999999999999999999997766555 567888999986 9999998 788899
Q ss_pred CCHHHHHHHHHHcCCCCCC-CCcEEEEecCHHHHHHHHHcCCeEEEEcCCCCC-------------------------cc
Q 026543 154 PSPDIFLAAAKRFEGGPID-SQEILVFEDAPSGVLAAKNAGMSVVMVPDPRLD-------------------------SS 207 (237)
Q Consensus 154 p~~~~~~~~l~~~~~~~~~-~~~~~~igD~~~Di~~a~~~G~~~i~v~~~~~~-------------------------~~ 207 (237)
|+|+.|..+++++| +. |++|++|||+.+|+++|+++|+.+|+|.+|... ++
T Consensus 157 P~p~~~~~a~~~l~---~~~~~~~l~IGDs~~Di~aA~~aGi~~i~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 233 (253)
T TIGR01422 157 PAPWMALKNAIELG---VYDVAACVKVGDTVPDIEEGRNAGMWTVGLILSSNELGLSEEEYRALDPAELEARRAEATARL 233 (253)
T ss_pred CCHHHHHHHHHHcC---CCCchheEEECCcHHHHHHHHHCCCeEEEEecCCcccCCCHHHHHhCCHHHHHHHHHHHHHHH
Confidence 99999999999999 95 999999999999999999999999999987642 23
Q ss_pred cccchhhhhhhhcccCCC
Q 026543 208 YHSNADQLLSSLLGFNPK 225 (237)
Q Consensus 208 ~~~~~~~~~~~~~el~~~ 225 (237)
...+++++++++.|+...
T Consensus 234 ~~~~~~~v~~~~~el~~~ 251 (253)
T TIGR01422 234 KAAGAHYVIDTLAELPAV 251 (253)
T ss_pred HhcCCCEehhcHHHHHHh
Confidence 356799999999998543
|
This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent. |
| >COG0546 Gph Predicted phosphatases [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.7e-34 Score=213.38 Aligned_cols=212 Identities=25% Similarity=0.314 Sum_probs=173.2
Q ss_pred CCCccEEEEecCcccccchhhHHHHHHHHHHHcCCC-CCHHHHHHhcCCChHHHHHHHHHHhCCCCCCCHHHHHHHHHHH
Q 026543 7 KKPITHVIFDMDGLLLDTEKFYTEVQELILARYNKT-FDWSLKAKMMGKKAIEAAQVFVEETGISDKLSAEDFLVQREET 85 (237)
Q Consensus 7 ~~~~~~vifD~DGTL~~~~~~~~~~~~~~~~~~g~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (237)
++++++|+||+||||+|+...+..++..+++++|.. ...+......|.+....+.......... ...+......+.+
T Consensus 1 ~~~~~~iiFDlDGTL~Ds~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~ 78 (220)
T COG0546 1 MMMIKAILFDLDGTLVDSAEDILRAFNAALAELGLPPLDEEEIRQLIGLGLDELIERLLGEADEE--AAAELVERLREEF 78 (220)
T ss_pred CCCCCEEEEeCCCccccChHHHHHHHHHHHHHcCCCCCCHHHHHHHhcCCHHHHHHHHhccccch--hHHHHHHHHHHHH
Confidence 357899999999999999999999999999999997 6788888888888887776665543322 1112222222222
Q ss_pred HHhhcC--CCCCCccHHHHHHHHHhCCCCEEEEeCChhhHHHHHHhhhhhhhhhcceeeeCCCCCccCCCCCHHHHHHHH
Q 026543 86 LQTLFP--TSELMPGASHLIRHLHAKGIPMCVATGSLARHFELKTQKHRELFSLMHHVVRGDDPEVKQGKPSPDIFLAAA 163 (237)
Q Consensus 86 ~~~~~~--~~~~~~~~~~~l~~l~~~g~~v~i~s~~~~~~~~~~~~~~~gl~~~f~~~~~~~~~~~~~~kp~~~~~~~~l 163 (237)
...... ...++||+.++|..|+++|++++|+||....... .+++.+|+..+|+.+++++ .....||+|..+..++
T Consensus 79 ~~~~~~~~~~~~~~gv~e~L~~L~~~g~~l~i~T~k~~~~~~-~~l~~~gl~~~F~~i~g~~--~~~~~KP~P~~l~~~~ 155 (220)
T COG0546 79 LTAYAELLESRLFPGVKELLAALKSAGYKLGIVTNKPERELD-ILLKALGLADYFDVIVGGD--DVPPPKPDPEPLLLLL 155 (220)
T ss_pred HHHHHhhccCccCCCHHHHHHHHHhCCCeEEEEeCCcHHHHH-HHHHHhCCccccceEEcCC--CCCCCCcCHHHHHHHH
Confidence 222222 2579999999999999999999999996655444 6788899999999999977 7888999999999999
Q ss_pred HHcCCCCCCCCcEEEEecCHHHHHHHHHcCCeEEEEcCCCC--CcccccchhhhhhhhcccCCCC
Q 026543 164 KRFEGGPIDSQEILVFEDAPSGVLAAKNAGMSVVMVPDPRL--DSSYHSNADQLLSSLLGFNPKD 226 (237)
Q Consensus 164 ~~~~~~~~~~~~~~~igD~~~Di~~a~~~G~~~i~v~~~~~--~~~~~~~~~~~~~~~~el~~~l 226 (237)
++++ ++|++++||||+.+|+++|++||+++++|.+|.. .......++++++++.|+...+
T Consensus 156 ~~~~---~~~~~~l~VGDs~~Di~aA~~Ag~~~v~v~~g~~~~~~l~~~~~d~vi~~~~el~~~l 217 (220)
T COG0546 156 EKLG---LDPEEALMVGDSLNDILAAKAAGVPAVGVTWGYNSREELAQAGADVVIDSLAELLALL 217 (220)
T ss_pred HHhC---CChhheEEECCCHHHHHHHHHcCCCEEEEECCCCCCcchhhcCCCEEECCHHHHHHHH
Confidence 9999 9988999999999999999999999999999874 4456778999999999986654
|
|
| >TIGR03351 PhnX-like phosphonatase-like hydrolase | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.8e-34 Score=214.13 Aligned_cols=208 Identities=23% Similarity=0.298 Sum_probs=167.8
Q ss_pred ccEEEEecCcccccchhhHHHHHHHHHHHcCCCCCHHHHHH-hcCCChHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHh
Q 026543 10 ITHVIFDMDGLLLDTEKFYTEVQELILARYNKTFDWSLKAK-MMGKKAIEAAQVFVEETGISDKLSAEDFLVQREETLQT 88 (237)
Q Consensus 10 ~~~vifD~DGTL~~~~~~~~~~~~~~~~~~g~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (237)
+++|+||+||||+++.+.+..++..+++++|.+.+.....+ +.|.+..+.++.+....+.+. ...+.+...+...+..
T Consensus 1 ~k~iiFD~DGTL~ds~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 79 (220)
T TIGR03351 1 ISLVVLDMAGTTVDEDGLVYRALRQAVTAAGLSPTPEEVQSAWMGQSKIEAIRALLALDGADE-AEAQAAFADFEERLAE 79 (220)
T ss_pred CcEEEEecCCCeeccCchHHHHHHHHHHHcCCCCCHHHHHHhhcCCCHHHHHHHHHhccCCCH-HHHHHHHHHHHHHHHH
Confidence 58999999999999999999999999999999877766655 778888887777777655431 1122233333333333
Q ss_pred hc--CCCCCCccHHHHHHHHHhCCCCEEEEeCChhhHHHHHHhhhhhhh--hhcceeeeCCCCCccCCCCCHHHHHHHHH
Q 026543 89 LF--PTSELMPGASHLIRHLHAKGIPMCVATGSLARHFELKTQKHRELF--SLMHHVVRGDDPEVKQGKPSPDIFLAAAK 164 (237)
Q Consensus 89 ~~--~~~~~~~~~~~~l~~l~~~g~~v~i~s~~~~~~~~~~~~~~~gl~--~~f~~~~~~~~~~~~~~kp~~~~~~~~l~ 164 (237)
.. ...+++||+.++|+.|+++|++++|+||+...... ..++.+|+. .+|+.+++++ +....||+|+.|..+++
T Consensus 80 ~~~~~~~~l~~G~~~~L~~L~~~g~~~~ivT~~~~~~~~-~~l~~~~l~~~~~f~~i~~~~--~~~~~KP~p~~~~~a~~ 156 (220)
T TIGR03351 80 AYDDGPPVALPGAEEAFRSLRSSGIKVALTTGFDRDTAE-RLLEKLGWTVGDDVDAVVCPS--DVAAGRPAPDLILRAME 156 (220)
T ss_pred HhcccCCccCCCHHHHHHHHHHCCCEEEEEeCCchHHHH-HHHHHhhhhhhccCCEEEcCC--cCCCCCCCHHHHHHHHH
Confidence 22 24689999999999999999999999997776655 467788998 9999999998 77789999999999999
Q ss_pred HcCCCCCC-CCcEEEEecCHHHHHHHHHcCCeE-EEEcCCCCC--cccccchhhhhhhhcccCC
Q 026543 165 RFEGGPID-SQEILVFEDAPSGVLAAKNAGMSV-VMVPDPRLD--SSYHSNADQLLSSLLGFNP 224 (237)
Q Consensus 165 ~~~~~~~~-~~~~~~igD~~~Di~~a~~~G~~~-i~v~~~~~~--~~~~~~~~~~~~~~~el~~ 224 (237)
+++ +. |++|+||||+.+|+++|+++|+.+ +++.++... ......++++++++.|+..
T Consensus 157 ~~~---~~~~~~~~~igD~~~Di~aa~~aG~~~~i~~~~g~~~~~~~~~~~~~~~i~~~~~l~~ 217 (220)
T TIGR03351 157 LTG---VQDVQSVAVAGDTPNDLEAGINAGAGAVVGVLTGAHDAEELSRHPHTHVLDSVADLPA 217 (220)
T ss_pred HcC---CCChhHeEEeCCCHHHHHHHHHCCCCeEEEEecCCCcHHHHhhcCCceeecCHHHHHH
Confidence 999 97 799999999999999999999999 899876553 2234578889999988743
|
This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the |
| >PRK13288 pyrophosphatase PpaX; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.4e-34 Score=213.91 Aligned_cols=205 Identities=20% Similarity=0.226 Sum_probs=164.7
Q ss_pred CccEEEEecCcccccchhhHHHHHHHHHHHcCCC-CCHHHHHHhcCCChHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHH
Q 026543 9 PITHVIFDMDGLLLDTEKFYTEVQELILARYNKT-FDWSLKAKMMGKKAIEAAQVFVEETGISDKLSAEDFLVQREETLQ 87 (237)
Q Consensus 9 ~~~~vifD~DGTL~~~~~~~~~~~~~~~~~~g~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (237)
++++|+||+||||+|+...+..++..++++++.. .+.+.+....|.+..+.++.+.. ...+.+...+...+.
T Consensus 2 ~~~~viFD~DGTL~ds~~~~~~a~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~-------~~~~~~~~~~~~~~~ 74 (214)
T PRK13288 2 KINTVLFDLDGTLINTNELIISSFLHTLKTYYPNQYKREDVLPFIGPSLHDTFSKIDE-------SKVEEMITTYREFNH 74 (214)
T ss_pred CccEEEEeCCCcCccCHHHHHHHHHHHHHHhCCCCCCHHHHHHHhCcCHHHHHHhcCH-------HHHHHHHHHHHHHHH
Confidence 5799999999999999999999999999998763 56666777778776655543211 122333333443333
Q ss_pred h-hcCCCCCCccHHHHHHHHHhCCCCEEEEeCChhhHHHHHHhhhhhhhhhcceeeeCCCCCccCCCCCHHHHHHHHHHc
Q 026543 88 T-LFPTSELMPGASHLIRHLHAKGIPMCVATGSLARHFELKTQKHRELFSLMHHVVRGDDPEVKQGKPSPDIFLAAAKRF 166 (237)
Q Consensus 88 ~-~~~~~~~~~~~~~~l~~l~~~g~~v~i~s~~~~~~~~~~~~~~~gl~~~f~~~~~~~~~~~~~~kp~~~~~~~~l~~~ 166 (237)
+ ......++||+.++|+.|+++|++++|+||+....+. ..++..|+..+|+.+++++ +....||+|..+..+++++
T Consensus 75 ~~~~~~~~~~~g~~~~l~~L~~~g~~~~i~S~~~~~~~~-~~l~~~gl~~~f~~i~~~~--~~~~~Kp~p~~~~~~~~~~ 151 (214)
T PRK13288 75 EHHDELVTEYETVYETLKTLKKQGYKLGIVTTKMRDTVE-MGLKLTGLDEFFDVVITLD--DVEHAKPDPEPVLKALELL 151 (214)
T ss_pred HhhhhhcccCcCHHHHHHHHHHCCCeEEEEeCCCHHHHH-HHHHHcCChhceeEEEecC--cCCCCCCCcHHHHHHHHHc
Confidence 2 2345789999999999999999999999997765544 5678889999999999998 7888999999999999999
Q ss_pred CCCCCCCCcEEEEecCHHHHHHHHHcCCeEEEEcCCCCCc--ccccchhhhhhhhcccCCCC
Q 026543 167 EGGPIDSQEILVFEDAPSGVLAAKNAGMSVVMVPDPRLDS--SYHSNADQLLSSLLGFNPKD 226 (237)
Q Consensus 167 ~~~~~~~~~~~~igD~~~Di~~a~~~G~~~i~v~~~~~~~--~~~~~~~~~~~~~~el~~~l 226 (237)
+ ++|+++++|||+.+|+++|+++|+.+++|.++.... .....++++++++.|+...+
T Consensus 152 ~---~~~~~~~~iGDs~~Di~aa~~aG~~~i~v~~g~~~~~~l~~~~~~~~i~~~~~l~~~i 210 (214)
T PRK13288 152 G---AKPEEALMVGDNHHDILAGKNAGTKTAGVAWTIKGREYLEQYKPDFMLDKMSDLLAIV 210 (214)
T ss_pred C---CCHHHEEEECCCHHHHHHHHHCCCeEEEEcCCCCCHHHHhhcCcCEEECCHHHHHHHH
Confidence 9 999999999999999999999999999998875532 23456889999999886543
|
|
| >PRK13226 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.4e-34 Score=214.95 Aligned_cols=209 Identities=19% Similarity=0.201 Sum_probs=162.2
Q ss_pred CCccEEEEecCcccccchhhHHHHHHHHHHHcCCC-CCHHHHHHhcCCChHHHHHHHHHHhCCCCCCCHHHHHHHHHHHH
Q 026543 8 KPITHVIFDMDGLLLDTEKFYTEVQELILARYNKT-FDWSLKAKMMGKKAIEAAQVFVEETGISDKLSAEDFLVQREETL 86 (237)
Q Consensus 8 ~~~~~vifD~DGTL~~~~~~~~~~~~~~~~~~g~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (237)
.++++|+||+||||+|+...+..++..+++++|.+ .+.+......|.+.....+.+... .. ....+++...+...+
T Consensus 10 ~~~k~viFD~DGTL~Ds~~~~~~a~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~~~--~~-~~~~~~~~~~~~~~~ 86 (229)
T PRK13226 10 RFPRAVLFDLDGTLLDSAPDMLATVNAMLAARGRAPITLAQLRPVVSKGARAMLAVAFPE--LD-AAARDALIPEFLQRY 86 (229)
T ss_pred ccCCEEEEcCcCccccCHHHHHHHHHHHHHHCCCCCCCHHHHHHHhhhHHHHHHHHHhcc--CC-hHHHHHHHHHHHHHH
Confidence 35699999999999999999999999999999985 455556666666555444333221 11 011223333333333
Q ss_pred Hh-hcCCCCCCccHHHHHHHHHhCCCCEEEEeCChhhHHHHHHhhhhhhhhhcceeeeCCCCCccCCCCCHHHHHHHHHH
Q 026543 87 QT-LFPTSELMPGASHLIRHLHAKGIPMCVATGSLARHFELKTQKHRELFSLMHHVVRGDDPEVKQGKPSPDIFLAAAKR 165 (237)
Q Consensus 87 ~~-~~~~~~~~~~~~~~l~~l~~~g~~v~i~s~~~~~~~~~~~~~~~gl~~~f~~~~~~~~~~~~~~kp~~~~~~~~l~~ 165 (237)
.. ......++||+.++|+.|+++|++++|+||+...... ..++..|+..+|+.+++++ ..+..||+|+.+..++++
T Consensus 87 ~~~~~~~~~~~pg~~~~L~~L~~~g~~l~i~Tn~~~~~~~-~~l~~~~l~~~f~~i~~~~--~~~~~KP~p~~~~~~~~~ 163 (229)
T PRK13226 87 EALIGTQSQLFDGVEGMLQRLECAGCVWGIVTNKPEYLAR-LILPQLGWEQRCAVLIGGD--TLAERKPHPLPLLVAAER 163 (229)
T ss_pred HHhhhhcCeeCCCHHHHHHHHHHCCCeEEEECCCCHHHHH-HHHHHcCchhcccEEEecC--cCCCCCCCHHHHHHHHHH
Confidence 33 2345789999999999999999999999997665443 5678889999999999888 777899999999999999
Q ss_pred cCCCCCCCCcEEEEecCHHHHHHHHHcCCeEEEEcCCCCC---cccccchhhhhhhhcccCCC
Q 026543 166 FEGGPIDSQEILVFEDAPSGVLAAKNAGMSVVMVPDPRLD---SSYHSNADQLLSSLLGFNPK 225 (237)
Q Consensus 166 ~~~~~~~~~~~~~igD~~~Di~~a~~~G~~~i~v~~~~~~---~~~~~~~~~~~~~~~el~~~ 225 (237)
+| ++|++|++|||+.+|+++|+++|+++|+|..+... ......++++++++.|+...
T Consensus 164 l~---~~p~~~l~IGDs~~Di~aA~~aG~~~i~v~~g~~~~~~~~~~~~~~~~i~~~~el~~~ 223 (229)
T PRK13226 164 IG---VAPTDCVYVGDDERDILAARAAGMPSVAALWGYRLHDDDPLAWQADVLVEQPQLLWNP 223 (229)
T ss_pred hC---CChhhEEEeCCCHHHHHHHHHCCCcEEEEeecCCCCCcChhhcCCCeeeCCHHHHHHH
Confidence 99 99999999999999999999999999999887652 22345799999999988543
|
|
| >TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-33 Score=210.31 Aligned_cols=204 Identities=21% Similarity=0.274 Sum_probs=165.4
Q ss_pred EEEecCcccccchhhHHHHHHHHHHHcCCC-CCHHHHHHhcCCChHHHHHHHHHHhCCCCCCCHH---HHHHHHHHHHHh
Q 026543 13 VIFDMDGLLLDTEKFYTEVQELILARYNKT-FDWSLKAKMMGKKAIEAAQVFVEETGISDKLSAE---DFLVQREETLQT 88 (237)
Q Consensus 13 vifD~DGTL~~~~~~~~~~~~~~~~~~g~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~ 88 (237)
|+||+||||+|+...+..++..+++++|.. .+.+.+....|.+....++.+...++.. ...+ .+.+.+...+.+
T Consensus 1 viFD~DGTL~Ds~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~ 78 (213)
T TIGR01449 1 VLFDLDGTLVDSAPDIAAAVNMALAALGLPPATLARVIGFIGNGVPVLMERVLAWAGQE--PDAQRVAELRKLFDRHYEE 78 (213)
T ss_pred CeecCCCccccCHHHHHHHHHHHHHHCCCCCCCHHHHHHHhcccHHHHHHHHhhccccc--cChHHHHHHHHHHHHHHHH
Confidence 689999999999999999999999999985 5666666777777777777777665544 3333 223333333333
Q ss_pred hc-CCCCCCccHHHHHHHHHhCCCCEEEEeCChhhHHHHHHhhhhhhhhhcceeeeCCCCCccCCCCCHHHHHHHHHHcC
Q 026543 89 LF-PTSELMPGASHLIRHLHAKGIPMCVATGSLARHFELKTQKHRELFSLMHHVVRGDDPEVKQGKPSPDIFLAAAKRFE 167 (237)
Q Consensus 89 ~~-~~~~~~~~~~~~l~~l~~~g~~v~i~s~~~~~~~~~~~~~~~gl~~~f~~~~~~~~~~~~~~kp~~~~~~~~l~~~~ 167 (237)
.. ....++||+.++|+.|+++|++++|+||+...... ..+++.|+..+|+.+++++ +....||+|+.|..++++++
T Consensus 79 ~~~~~~~~~~g~~~~L~~l~~~g~~~~i~S~~~~~~~~-~~l~~~~l~~~f~~~~~~~--~~~~~Kp~p~~~~~~~~~~~ 155 (213)
T TIGR01449 79 VAGELTSVFPGVEATLGALRAKGLRLGLVTNKPTPLAR-PLLELLGLAKYFSVLIGGD--SLAQRKPHPDPLLLAAERLG 155 (213)
T ss_pred hccccCccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHH-HHHHHcCcHhhCcEEEecC--CCCCCCCChHHHHHHHHHcC
Confidence 22 34789999999999999999999999997665544 5688889999999999998 78888999999999999999
Q ss_pred CCCCCCCcEEEEecCHHHHHHHHHcCCeEEEEcCCCCC--cccccchhhhhhhhcccCC
Q 026543 168 GGPIDSQEILVFEDAPSGVLAAKNAGMSVVMVPDPRLD--SSYHSNADQLLSSLLGFNP 224 (237)
Q Consensus 168 ~~~~~~~~~~~igD~~~Di~~a~~~G~~~i~v~~~~~~--~~~~~~~~~~~~~~~el~~ 224 (237)
++|++|++|||+.+|+++|+++|+.+++|.++... ......++++++++.|+..
T Consensus 156 ---~~~~~~~~igDs~~d~~aa~~aG~~~i~v~~g~~~~~~l~~~~a~~~i~~~~~l~~ 211 (213)
T TIGR01449 156 ---VAPQQMVYVGDSRVDIQAARAAGCPSVLLTYGYRYGEAIDLLPPDVLYDSLNELPP 211 (213)
T ss_pred ---CChhHeEEeCCCHHHHHHHHHCCCeEEEEccCCCCCcchhhcCCCeEeCCHHHHHh
Confidence 99999999999999999999999999999887652 2334578999999998754
|
This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702). |
| >PLN03243 haloacid dehalogenase-like hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-33 Score=214.53 Aligned_cols=209 Identities=20% Similarity=0.290 Sum_probs=160.6
Q ss_pred CccEEEEecCcccccch-hhHHHHHHHHHHHcCCCCCHHHH-HHhcCCChHHHHHHHHHHhCCCCCCCHHHHHHHHHHHH
Q 026543 9 PITHVIFDMDGLLLDTE-KFYTEVQELILARYNKTFDWSLK-AKMMGKKAIEAAQVFVEETGISDKLSAEDFLVQREETL 86 (237)
Q Consensus 9 ~~~~vifD~DGTL~~~~-~~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (237)
.+++|+|||||||+|+. ..+..+|..+++++|+....+.. ....|.+....++.+... ... ......+...+...+
T Consensus 23 ~~k~vIFDlDGTLvDS~~~~~~~a~~~~~~~~G~~~~~~e~~~~~~G~~~~~~~~~l~~~-~~~-~~~~~~l~~~~~~~~ 100 (260)
T PLN03243 23 GWLGVVLEWEGVIVEDDSELERKAWRALAEEEGKRPPPAFLLKRAEGMKNEQAISEVLCW-SRD-FLQMKRLAIRKEDLY 100 (260)
T ss_pred CceEEEEeCCCceeCCchHHHHHHHHHHHHHcCCCCCHHHHHHHhcCCCHHHHHHHHhcc-CCC-HHHHHHHHHHHHHHH
Confidence 47999999999999996 56678999999999997666544 567788877766665432 111 011123333333333
Q ss_pred Hhhc-CCCCCCccHHHHHHHHHhCCCCEEEEeCChhhHHHHHHhhhhhhhhhcceeeeCCCCCccCCCCCHHHHHHHHHH
Q 026543 87 QTLF-PTSELMPGASHLIRHLHAKGIPMCVATGSLARHFELKTQKHRELFSLMHHVVRGDDPEVKQGKPSPDIFLAAAKR 165 (237)
Q Consensus 87 ~~~~-~~~~~~~~~~~~l~~l~~~g~~v~i~s~~~~~~~~~~~~~~~gl~~~f~~~~~~~~~~~~~~kp~~~~~~~~l~~ 165 (237)
.... ....++||+.++|+.|+++|++++|+||+...... ..++++|+..+|+.+++++ +....||+|+.|..++++
T Consensus 101 ~~~~~~~~~l~pg~~e~L~~L~~~g~~l~I~Tn~~~~~~~-~~l~~~gl~~~Fd~ii~~~--d~~~~KP~Pe~~~~a~~~ 177 (260)
T PLN03243 101 EYMQGGLYRLRPGSREFVQALKKHEIPIAVASTRPRRYLE-RAIEAVGMEGFFSVVLAAE--DVYRGKPDPEMFMYAAER 177 (260)
T ss_pred HHHHccCcccCCCHHHHHHHHHHCCCEEEEEeCcCHHHHH-HHHHHcCCHhhCcEEEecc--cCCCCCCCHHHHHHHHHH
Confidence 3222 34678999999999999999999999997665554 5688889999999999999 888899999999999999
Q ss_pred cCCCCCCCCcEEEEecCHHHHHHHHHcCCeEEEEcCCCCCcccccchhhhhhhhcccCCCC
Q 026543 166 FEGGPIDSQEILVFEDAPSGVLAAKNAGMSVVMVPDPRLDSSYHSNADQLLSSLLGFNPKD 226 (237)
Q Consensus 166 ~~~~~~~~~~~~~igD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~~~~el~~~l 226 (237)
+| ++|++|+||||+..|+++|+++|+.+|+|. +.........+++++++++|+....
T Consensus 178 l~---~~p~~~l~IgDs~~Di~aA~~aG~~~i~v~-g~~~~~~l~~ad~vi~~~~el~~~~ 234 (260)
T PLN03243 178 LG---FIPERCIVFGNSNSSVEAAHDGCMKCVAVA-GKHPVYELSAGDLVVRRLDDLSVVD 234 (260)
T ss_pred hC---CChHHeEEEcCCHHHHHHHHHcCCEEEEEe-cCCchhhhccCCEEeCCHHHHHHHH
Confidence 99 999999999999999999999999999997 4332222335677777777765443
|
|
| >PRK13478 phosphonoacetaldehyde hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5e-33 Score=215.52 Aligned_cols=212 Identities=21% Similarity=0.208 Sum_probs=163.1
Q ss_pred CCCccEEEEecCcccccchhh-HHHHHHHHHHHcCCCCCHHHHHHhcCCChHHHHHH----------HHHHhCCCCCCCH
Q 026543 7 KKPITHVIFDMDGLLLDTEKF-YTEVQELILARYNKTFDWSLKAKMMGKKAIEAAQV----------FVEETGISDKLSA 75 (237)
Q Consensus 7 ~~~~~~vifD~DGTL~~~~~~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~ 75 (237)
|+++|+|+||+||||+|+... +..++..+++++|.+.+.+......|.+.....+. +...++.. ...
T Consensus 1 ~~~~k~vIFDlDGTLiDs~~~~~~~a~~~~~~~~g~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~g~~--~~~ 78 (267)
T PRK13478 1 MMKIQAVIFDWAGTTVDFGSFAPTQAFVEAFAQFGVEITLEEARGPMGLGKWDHIRALLKMPRVAARWQAVFGRL--PTE 78 (267)
T ss_pred CCceEEEEEcCCCCeecCCCccHHHHHHHHHHHcCCCCCHHHHHHhcCCCHHHHHHHHHhcHHHHHHHHHHhCCC--CCH
Confidence 567899999999999998653 46899999999998777776666777665443332 23344543 333
Q ss_pred HHHHHH---HHHHHH-hhcCCCCCCccHHHHHHHHHhCCCCEEEEeCChhhHHHHHHhhhhhhhhhc-ceeeeCCCCCcc
Q 026543 76 EDFLVQ---REETLQ-TLFPTSELMPGASHLIRHLHAKGIPMCVATGSLARHFELKTQKHRELFSLM-HHVVRGDDPEVK 150 (237)
Q Consensus 76 ~~~~~~---~~~~~~-~~~~~~~~~~~~~~~l~~l~~~g~~v~i~s~~~~~~~~~~~~~~~gl~~~f-~~~~~~~~~~~~ 150 (237)
+..... +...+. .......++||+.++|+.|+++|++++|+||+...... ..++..++..+| +.+++++ +..
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~pg~~elL~~L~~~g~~l~I~T~~~~~~~~-~~l~~~~l~~~~~d~i~~~~--~~~ 155 (267)
T PRK13478 79 ADVDALYAAFEPLQIAKLADYATPIPGVLEVIAALRARGIKIGSTTGYTREMMD-VVVPLAAAQGYRPDHVVTTD--DVP 155 (267)
T ss_pred HHHHHHHHHHHHHHHHHHhhcCCCCCCHHHHHHHHHHCCCEEEEEcCCcHHHHH-HHHHHHhhcCCCceEEEcCC--cCC
Confidence 333332 222222 23345789999999999999999999999997666544 467777787774 8999998 788
Q ss_pred CCCCCHHHHHHHHHHcCCCCCC-CCcEEEEecCHHHHHHHHHcCCeEEEEcCCCCC------------------------
Q 026543 151 QGKPSPDIFLAAAKRFEGGPID-SQEILVFEDAPSGVLAAKNAGMSVVMVPDPRLD------------------------ 205 (237)
Q Consensus 151 ~~kp~~~~~~~~l~~~~~~~~~-~~~~~~igD~~~Di~~a~~~G~~~i~v~~~~~~------------------------ 205 (237)
..||+|+.|..+++++| +. +++|+||||+.+|+++|+++|+.+|+|.++...
T Consensus 156 ~~KP~p~~~~~a~~~l~---~~~~~e~l~IGDs~~Di~aA~~aG~~~i~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (267)
T PRK13478 156 AGRPYPWMALKNAIELG---VYDVAACVKVDDTVPGIEEGLNAGMWTVGVILSGNELGLSEEEYQALSAAELAARRERAR 232 (267)
T ss_pred CCCCChHHHHHHHHHcC---CCCCcceEEEcCcHHHHHHHHHCCCEEEEEccCcccccCCHHHHHhcCHHHHHHHHHHHH
Confidence 88999999999999999 96 699999999999999999999999999987652
Q ss_pred -cccccchhhhhhhhcccCCCC
Q 026543 206 -SSYHSNADQLLSSLLGFNPKD 226 (237)
Q Consensus 206 -~~~~~~~~~~~~~~~el~~~l 226 (237)
.....+++++++++.|+...+
T Consensus 233 ~~l~~~~a~~vi~~~~~l~~~l 254 (267)
T PRK13478 233 ARLRAAGAHYVIDTIADLPAVI 254 (267)
T ss_pred HHHHHcCCCeehhhHHHHHHHH
Confidence 233567899999999986544
|
|
| >COG0637 Predicted phosphatase/phosphohexomutase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-32 Score=205.94 Aligned_cols=208 Identities=31% Similarity=0.424 Sum_probs=167.3
Q ss_pred CccEEEEecCcccccchhhHHHHHHHHHHHcCCCCCHHHHHHhcCCChHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHh
Q 026543 9 PITHVIFDMDGLLLDTEKFYTEVQELILARYNKTFDWSLKAKMMGKKAIEAAQVFVEETGISDKLSAEDFLVQREETLQT 88 (237)
Q Consensus 9 ~~~~vifD~DGTL~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (237)
++++|+|||||||+||...+.++|.++++++|+..+.+......|.........+.........................
T Consensus 1 ~~~avIFD~DGvLvDse~~~~~a~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (221)
T COG0637 1 MIKAVIFDMDGTLVDSEPLHARAWLEALKEYGIEISDEEIRELHGGGIARIIDLLRKLAAGEDPADLAELERLLYEAEAL 80 (221)
T ss_pred CCcEEEEcCCCCcCcchHHHHHHHHHHHHHcCCCCCHHHHHHHHCCChHHHHHHHHHHhcCCcccCHHHHHHHHHHHHHh
Confidence 47999999999999999999999999999999999888887778877777777777765543212233334444444445
Q ss_pred hcCCCCCCccHHHHHHHHHhCCCCEEEEeCChhhHHHHHHhhhhhhhhhcceeeeCCCCCccCCCCCHHHHHHHHHHcCC
Q 026543 89 LFPTSELMPGASHLIRHLHAKGIPMCVATGSLARHFELKTQKHRELFSLMHHVVRGDDPEVKQGKPSPDIFLAAAKRFEG 168 (237)
Q Consensus 89 ~~~~~~~~~~~~~~l~~l~~~g~~v~i~s~~~~~~~~~~~~~~~gl~~~f~~~~~~~~~~~~~~kp~~~~~~~~l~~~~~ 168 (237)
.....++.||+.++|+.|+++|+++++.|++...... ..++..|+.++|+.+++++ ++..+||.|+.|..+++++|
T Consensus 81 ~~~~~~~~pGv~~~l~~L~~~~i~~avaS~s~~~~~~-~~L~~~gl~~~f~~~v~~~--dv~~~KP~Pd~yL~Aa~~Lg- 156 (221)
T COG0637 81 ELEGLKPIPGVVELLEQLKARGIPLAVASSSPRRAAE-RVLARLGLLDYFDVIVTAD--DVARGKPAPDIYLLAAERLG- 156 (221)
T ss_pred hhcCCCCCccHHHHHHHHHhcCCcEEEecCChHHHHH-HHHHHccChhhcchhccHH--HHhcCCCCCHHHHHHHHHcC-
Confidence 5566899999999999999999999999996665544 5788889999999999998 78888999999999999999
Q ss_pred CCCCCCcEEEEecCHHHHHHHHHcCCeEEEEcCCCCC----cccccchhhhhhhhccc
Q 026543 169 GPIDSQEILVFEDAPSGVLAAKNAGMSVVMVPDPRLD----SSYHSNADQLLSSLLGF 222 (237)
Q Consensus 169 ~~~~~~~~~~igD~~~Di~~a~~~G~~~i~v~~~~~~----~~~~~~~~~~~~~~~el 222 (237)
++|++|+.|+|+++++++|++|||.+++|..+... .......+....++.++
T Consensus 157 --v~P~~CvviEDs~~Gi~Aa~aAGm~vv~v~~~~~~~~~~~~~~~~~~~~~~~~~~l 212 (221)
T COG0637 157 --VDPEECVVVEDSPAGIQAAKAAGMRVVGVPAGHDRPHLDPLDAHGADTVLLDLAEL 212 (221)
T ss_pred --CChHHeEEEecchhHHHHHHHCCCEEEEecCCCCccccchhhhhhcchhhccHHHH
Confidence 99999999999999999999999999999974331 22234445555555544
|
|
| >PRK10563 6-phosphogluconate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.6e-32 Score=204.87 Aligned_cols=207 Identities=18% Similarity=0.350 Sum_probs=166.8
Q ss_pred CCCccEEEEecCcccccchhhHHHHHHHHHHHcCCCCCHHH-HHHhcCCChHHHHHHHHHHhCCCCCCCHHHHHHHHHHH
Q 026543 7 KKPITHVIFDMDGLLLDTEKFYTEVQELILARYNKTFDWSL-KAKMMGKKAIEAAQVFVEETGISDKLSAEDFLVQREET 85 (237)
Q Consensus 7 ~~~~~~vifD~DGTL~~~~~~~~~~~~~~~~~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (237)
|+++++|+||+||||+|+...+..++.++++++|.+...+. ...+.+.+....++.+...++.. ...+++...+...
T Consensus 1 ~~~~~~viFD~DGTL~d~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~ 78 (221)
T PRK10563 1 MSQIEAVFFDCDGTLVDSEVICSRAYVTMFAEFGITLSLEEVFKRFKGVKLYEIIDIISKEHGVT--LAKAELEPVYRAE 78 (221)
T ss_pred CCCCCEEEECCCCCCCCChHHHHHHHHHHHHHcCCCCCHHHHHHHhcCCCHHHHHHHHHHHhCCC--CCHHHHHHHHHHH
Confidence 34689999999999999999999999999999998776544 45556777788888888888876 5556666555443
Q ss_pred HHh-hcCCCCCCccHHHHHHHHHhCCCCEEEEeCChhhHHHHHHhhhhhhhhhcc-eeeeCCCCCccCCCCCHHHHHHHH
Q 026543 86 LQT-LFPTSELMPGASHLIRHLHAKGIPMCVATGSLARHFELKTQKHRELFSLMH-HVVRGDDPEVKQGKPSPDIFLAAA 163 (237)
Q Consensus 86 ~~~-~~~~~~~~~~~~~~l~~l~~~g~~v~i~s~~~~~~~~~~~~~~~gl~~~f~-~~~~~~~~~~~~~kp~~~~~~~~l 163 (237)
+.. ......++||+.++|+.| +++++|+||+....+. ..++..|+..+|+ .+++++ +.+..||+|+.|..++
T Consensus 79 ~~~~~~~~~~~~~gv~~~L~~L---~~~~~ivTn~~~~~~~-~~l~~~~l~~~F~~~v~~~~--~~~~~KP~p~~~~~a~ 152 (221)
T PRK10563 79 VARLFDSELEPIAGANALLESI---TVPMCVVSNGPVSKMQ-HSLGKTGMLHYFPDKLFSGY--DIQRWKPDPALMFHAA 152 (221)
T ss_pred HHHHHHccCCcCCCHHHHHHHc---CCCEEEEeCCcHHHHH-HHHHhcChHHhCcceEeeHH--hcCCCCCChHHHHHHH
Confidence 332 234578999999999999 3899999997766555 4678889999996 677887 6788999999999999
Q ss_pred HHcCCCCCCCCcEEEEecCHHHHHHHHHcCCeEEEEcCCCCCcccccchhhhhhhhcccCC
Q 026543 164 KRFEGGPIDSQEILVFEDAPSGVLAAKNAGMSVVMVPDPRLDSSYHSNADQLLSSLLGFNP 224 (237)
Q Consensus 164 ~~~~~~~~~~~~~~~igD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~~~~el~~ 224 (237)
+++| ++|++|++|||++.|+++|+++|+.++++..+...+.....++.++.++.||..
T Consensus 153 ~~~~---~~p~~~l~igDs~~di~aA~~aG~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~ 210 (221)
T PRK10563 153 EAMN---VNVENCILVDDSSAGAQSGIAAGMEVFYFCADPHNKPIDHPLVTTFTDLAQLPE 210 (221)
T ss_pred HHcC---CCHHHeEEEeCcHhhHHHHHHCCCEEEEECCCCCCcchhhhhhHHHHHHHHHHH
Confidence 9999 999999999999999999999999999997544433233456677888888754
|
|
| >PLN02575 haloacid dehalogenase-like hydrolase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-32 Score=216.69 Aligned_cols=207 Identities=19% Similarity=0.243 Sum_probs=165.1
Q ss_pred CccEEEEecCcccccchh-hHHHHHHHHHHHcCCCCCHHH-HHHhcCCChHHHHHHHHHHhCCCCCCCHHHHHHHHHHHH
Q 026543 9 PITHVIFDMDGLLLDTEK-FYTEVQELILARYNKTFDWSL-KAKMMGKKAIEAAQVFVEETGISDKLSAEDFLVQREETL 86 (237)
Q Consensus 9 ~~~~vifD~DGTL~~~~~-~~~~~~~~~~~~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (237)
..++|+|||||||+|+.. .+..+|..+++++|....... .....|.+....++.+....... ...+.+.+.+...+
T Consensus 130 ~~~~VIFDlDGTLIDS~~~i~~~a~~~l~~e~G~~~~~~e~~~~~~G~~~~~~l~~ll~~~~~~--~~~e~l~~~~~~~y 207 (381)
T PLN02575 130 GWLGAIFEWEGVIIEDNPDLENQAWLTLAQEEGKSPPPAFILRRVEGMKNEQAISEVLCWSRDP--AELRRMATRKEEIY 207 (381)
T ss_pred CCCEEEEcCcCcceeCHHHHHHHHHHHHHHHcCCCCCHHHHHHHhcCCCHHHHHHHHhhccCCH--HHHHHHHHHHHHHH
Confidence 479999999999999987 556799999999999766553 56778888887777665432111 22233444444444
Q ss_pred Hhhc-CCCCCCccHHHHHHHHHhCCCCEEEEeCChhhHHHHHHhhhhhhhhhcceeeeCCCCCccCCCCCHHHHHHHHHH
Q 026543 87 QTLF-PTSELMPGASHLIRHLHAKGIPMCVATGSLARHFELKTQKHRELFSLMHHVVRGDDPEVKQGKPSPDIFLAAAKR 165 (237)
Q Consensus 87 ~~~~-~~~~~~~~~~~~l~~l~~~g~~v~i~s~~~~~~~~~~~~~~~gl~~~f~~~~~~~~~~~~~~kp~~~~~~~~l~~ 165 (237)
.+.. ....++||+.++|+.|+++|++++|+||+....+. ..++..|+..+|+.+++++ +....||+|+.|..++++
T Consensus 208 ~~~~~~~~~l~pGa~ElL~~Lk~~GiklaIaSn~~~~~~~-~~L~~lgL~~yFd~Iv~sd--dv~~~KP~Peifl~A~~~ 284 (381)
T PLN02575 208 QALQGGIYRLRTGSQEFVNVLMNYKIPMALVSTRPRKTLE-NAIGSIGIRGFFSVIVAAE--DVYRGKPDPEMFIYAAQL 284 (381)
T ss_pred HHHhccCCCcCcCHHHHHHHHHHCCCeEEEEeCCCHHHHH-HHHHHcCCHHHceEEEecC--cCCCCCCCHHHHHHHHHH
Confidence 4333 34679999999999999999999999997766555 5688899999999999999 788899999999999999
Q ss_pred cCCCCCCCCcEEEEecCHHHHHHHHHcCCeEEEEcCCCCCcccccchhhhhhhhcccCC
Q 026543 166 FEGGPIDSQEILVFEDAPSGVLAAKNAGMSVVMVPDPRLDSSYHSNADQLLSSLLGFNP 224 (237)
Q Consensus 166 ~~~~~~~~~~~~~igD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~~~~el~~ 224 (237)
+| ++|++|+||||+..|+++|+++|+.+|+|..+.... ....++++++++.||..
T Consensus 285 lg---l~Peecl~IGDS~~DIeAAk~AGm~~IgV~~~~~~~-~l~~Ad~iI~s~~EL~~ 339 (381)
T PLN02575 285 LN---FIPERCIVFGNSNQTVEAAHDARMKCVAVASKHPIY-ELGAADLVVRRLDELSI 339 (381)
T ss_pred cC---CCcccEEEEcCCHHHHHHHHHcCCEEEEECCCCChh-HhcCCCEEECCHHHHHH
Confidence 99 999999999999999999999999999998653322 23457888999998843
|
|
| >PRK11587 putative phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-32 Score=206.70 Aligned_cols=202 Identities=27% Similarity=0.342 Sum_probs=156.1
Q ss_pred CccEEEEecCcccccchhhHHHHHHHHHHHcCCCCCHHHHHHhcCCChHHHHHHHHHHhCCCCCCCHHHHHHHHHH---H
Q 026543 9 PITHVIFDMDGLLLDTEKFYTEVQELILARYNKTFDWSLKAKMMGKKAIEAAQVFVEETGISDKLSAEDFLVQREE---T 85 (237)
Q Consensus 9 ~~~~vifD~DGTL~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~ 85 (237)
++++|+||+||||+|+...+..++..+++++|.+. .+......|.+....++.+... ...+.+...+.. +
T Consensus 2 ~~k~viFDlDGTL~Ds~~~~~~a~~~~~~~~g~~~-~~~~~~~~g~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~ 74 (218)
T PRK11587 2 RCKGFLFDLDGTLVDSLPAVERAWSNWADRHGIAP-DEVLNFIHGKQAITSLRHFMAG------ASEAEIQAEFTRLEQI 74 (218)
T ss_pred CCCEEEEcCCCCcCcCHHHHHHHHHHHHHHcCCCH-HHHHHHHcCCCHHHHHHHHhcc------CCcHHHHHHHHHHHHH
Confidence 57999999999999999999999999999999863 2333344576666555544321 223333333322 1
Q ss_pred HHhhcCCCCCCccHHHHHHHHHhCCCCEEEEeCChhhHHHHHHhhhhhhhhhcceeeeCCCCCccCCCCCHHHHHHHHHH
Q 026543 86 LQTLFPTSELMPGASHLIRHLHAKGIPMCVATGSLARHFELKTQKHRELFSLMHHVVRGDDPEVKQGKPSPDIFLAAAKR 165 (237)
Q Consensus 86 ~~~~~~~~~~~~~~~~~l~~l~~~g~~v~i~s~~~~~~~~~~~~~~~gl~~~f~~~~~~~~~~~~~~kp~~~~~~~~l~~ 165 (237)
.........++||+.++|+.|+++|++++|+||+...... ..++..++ .+|+.+++++ +....||+|..|..++++
T Consensus 75 ~~~~~~~~~~~pg~~e~L~~L~~~g~~~~ivTn~~~~~~~-~~l~~~~l-~~~~~i~~~~--~~~~~KP~p~~~~~~~~~ 150 (218)
T PRK11587 75 EATDTEGITALPGAIALLNHLNKLGIPWAIVTSGSVPVAS-ARHKAAGL-PAPEVFVTAE--RVKRGKPEPDAYLLGAQL 150 (218)
T ss_pred HHhhhcCceeCcCHHHHHHHHHHcCCcEEEEcCCCchHHH-HHHHhcCC-CCccEEEEHH--HhcCCCCCcHHHHHHHHH
Confidence 1222345789999999999999999999999997665443 44566676 4578888887 777889999999999999
Q ss_pred cCCCCCCCCcEEEEecCHHHHHHHHHcCCeEEEEcCCCCCcccccchhhhhhhhcccCCC
Q 026543 166 FEGGPIDSQEILVFEDAPSGVLAAKNAGMSVVMVPDPRLDSSYHSNADQLLSSLLGFNPK 225 (237)
Q Consensus 166 ~~~~~~~~~~~~~igD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~~~~el~~~ 225 (237)
+| ++|++|++|||+..|+++|+++|+.+++|..+... .....++++++++.|+...
T Consensus 151 ~g---~~p~~~l~igDs~~di~aA~~aG~~~i~v~~~~~~-~~~~~~~~~~~~~~el~~~ 206 (218)
T PRK11587 151 LG---LAPQECVVVEDAPAGVLSGLAAGCHVIAVNAPADT-PRLDEVDLVLHSLEQLTVT 206 (218)
T ss_pred cC---CCcccEEEEecchhhhHHHHHCCCEEEEECCCCch-hhhccCCEEecchhheeEE
Confidence 99 99999999999999999999999999999876532 2345689999999998644
|
|
| >TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.9e-32 Score=204.38 Aligned_cols=205 Identities=20% Similarity=0.251 Sum_probs=150.1
Q ss_pred ccEEEEecCcccccchhhHHHHHHHH---HHHcCCCCCHHHHHHhc-------CCChHHHHHHHHHHhCCCCCCCHHHHH
Q 026543 10 ITHVIFDMDGLLLDTEKFYTEVQELI---LARYNKTFDWSLKAKMM-------GKKAIEAAQVFVEETGISDKLSAEDFL 79 (237)
Q Consensus 10 ~~~vifD~DGTL~~~~~~~~~~~~~~---~~~~g~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (237)
+++|+||+||||+++...+..++..+ +..+|.+.+.+...... +.........+....+.. ...+...
T Consensus 2 ~~~viFDlDGTL~ds~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~ 79 (221)
T TIGR02253 2 IKAIFFDLDDTLIDTSGLAEKARRNAIEVLIEAGLNVDFEEAYEELLKLIKEYGSNYPTHFDYLIRRLWEE--YNPKLVA 79 (221)
T ss_pred ceEEEEeCCCCCcCCCCccCHHHHHHHHHHHHCCCcCCHHHHHHHHHHHHHHhccccCcchHHHHHHHhhh--cCHHHHH
Confidence 68999999999999998887777654 45667766554433211 111111111122222211 2223333
Q ss_pred HHHHHHHHhhcCCCCCCccHHHHHHHHHhCCCCEEEEeCChhhHHHHHHhhhhhhhhhcceeeeCCCCCccCCCCCHHHH
Q 026543 80 VQREETLQTLFPTSELMPGASHLIRHLHAKGIPMCVATGSLARHFELKTQKHRELFSLMHHVVRGDDPEVKQGKPSPDIF 159 (237)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~v~i~s~~~~~~~~~~~~~~~gl~~~f~~~~~~~~~~~~~~kp~~~~~ 159 (237)
.....+.........++||+.++|+.|+++|++++|+||+...... ..++..|+..+|+.+++++ +.+..||+|+.|
T Consensus 80 ~~~~~~~~~~~~~~~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~-~~l~~~~l~~~f~~i~~~~--~~~~~KP~~~~~ 156 (221)
T TIGR02253 80 AFVYAYHKLKFAYLRVYPGVRDTLMELRESGYRLGIITDGLPVKQW-EKLERLGVRDFFDAVITSE--EEGVEKPHPKIF 156 (221)
T ss_pred HHHHHHHHHHHHhCCCCCCHHHHHHHHHHCCCEEEEEeCCchHHHH-HHHHhCChHHhccEEEEec--cCCCCCCCHHHH
Confidence 3333333333345789999999999999999999999997765554 4578889999999999998 888899999999
Q ss_pred HHHHHHcCCCCCCCCcEEEEecCH-HHHHHHHHcCCeEEEEcCCCCCc---ccccchhhhhhhhccc
Q 026543 160 LAAAKRFEGGPIDSQEILVFEDAP-SGVLAAKNAGMSVVMVPDPRLDS---SYHSNADQLLSSLLGF 222 (237)
Q Consensus 160 ~~~l~~~~~~~~~~~~~~~igD~~-~Di~~a~~~G~~~i~v~~~~~~~---~~~~~~~~~~~~~~el 222 (237)
..+++++| ++|+++++|||+. +|+.+|+++|+.+|++..+.... .....+++++.++.|+
T Consensus 157 ~~~~~~~~---~~~~~~~~igDs~~~di~~A~~aG~~~i~~~~~~~~~~~~~~~~~~~~~i~~~~el 220 (221)
T TIGR02253 157 YAALKRLG---VKPEEAVMVGDRLDKDIKGAKNLGMKTVWINQGKSSKMEDDVYPYPDYEISSLREL 220 (221)
T ss_pred HHHHHHcC---CChhhEEEECCChHHHHHHHHHCCCEEEEECCCCCcccccccccCCCeeeCcHHhh
Confidence 99999999 9999999999998 89999999999999998876532 2234678888888876
|
This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). |
| >PRK13223 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.8e-32 Score=209.31 Aligned_cols=218 Identities=21% Similarity=0.272 Sum_probs=167.2
Q ss_pred CCccCC---CCCccEEEEecCcccccchhhHHHHHHHHHHHcCCCC-CHHHHHHhcCCChHHHHHHHHHH-h---CCCCC
Q 026543 1 MAAVSS---KKPITHVIFDMDGLLLDTEKFYTEVQELILARYNKTF-DWSLKAKMMGKKAIEAAQVFVEE-T---GISDK 72 (237)
Q Consensus 1 m~~~~~---~~~~~~vifD~DGTL~~~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~-~---~~~~~ 72 (237)
|+++.. -+.+++|+|||||||+|+...+..++..+++++|.+. ..+......+.+.......+... + +++.
T Consensus 1 ~~~~~~~~~~~~~k~viFDlDGTL~Ds~~~~~~a~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~- 79 (272)
T PRK13223 1 MSGFEQLFPGRLPRLVMFDLDGTLVDSVPDLAAAVDRMLLELGRPPAGLEAVRHWVGNGAPVLVRRALAGSIDHDGVDD- 79 (272)
T ss_pred CcchhhhCCCccCCEEEEcCCCccccCHHHHHHHHHHHHHHcCCCCCCHHHHHHHhChhHHHHHHHHhcccccccCCCH-
Confidence 555432 2458999999999999999999999999999999875 34455666676655554444321 1 2220
Q ss_pred CCHHHHHHHHHHHHHhhcCCCCCCccHHHHHHHHHhCCCCEEEEeCChhhHHHHHHhhhhhhhhhcceeeeCCCCCccCC
Q 026543 73 LSAEDFLVQREETLQTLFPTSELMPGASHLIRHLHAKGIPMCVATGSLARHFELKTQKHRELFSLMHHVVRGDDPEVKQG 152 (237)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~v~i~s~~~~~~~~~~~~~~~gl~~~f~~~~~~~~~~~~~~ 152 (237)
...+.+.+.+...+........++||+.++|+.|+++|++++|+||+...... ..++..++..+|+.+++++ ..+..
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~e~L~~Lk~~g~~l~ivTn~~~~~~~-~~l~~~~i~~~f~~i~~~d--~~~~~ 156 (272)
T PRK13223 80 ELAEQALALFMEAYADSHELTVVYPGVRDTLKWLKKQGVEMALITNKPERFVA-PLLDQMKIGRYFRWIIGGD--TLPQK 156 (272)
T ss_pred HHHHHHHHHHHHHHHhcCcCCccCCCHHHHHHHHHHCCCeEEEEECCcHHHHH-HHHHHcCcHhhCeEEEecC--CCCCC
Confidence 11223333344444333334678999999999999999999999997665444 5677788999999999998 77889
Q ss_pred CCCHHHHHHHHHHcCCCCCCCCcEEEEecCHHHHHHHHHcCCeEEEEcCCCCC--cccccchhhhhhhhcccCCC
Q 026543 153 KPSPDIFLAAAKRFEGGPIDSQEILVFEDAPSGVLAAKNAGMSVVMVPDPRLD--SSYHSNADQLLSSLLGFNPK 225 (237)
Q Consensus 153 kp~~~~~~~~l~~~~~~~~~~~~~~~igD~~~Di~~a~~~G~~~i~v~~~~~~--~~~~~~~~~~~~~~~el~~~ 225 (237)
||++..+..+++++| ++|++|++|||+.+|+++|+++|+++++|.+|... +.....++++++++.+|...
T Consensus 157 Kp~p~~~~~~~~~~g---~~~~~~l~IGD~~~Di~aA~~aGi~~i~v~~G~~~~~~l~~~~~~~vi~~l~el~~~ 228 (272)
T PRK13223 157 KPDPAALLFVMKMAG---VPPSQSLFVGDSRSDVLAAKAAGVQCVALSYGYNHGRPIAEESPALVIDDLRALLPG 228 (272)
T ss_pred CCCcHHHHHHHHHhC---CChhHEEEECCCHHHHHHHHHCCCeEEEEecCCCCchhhhhcCCCEEECCHHHHHHH
Confidence 999999999999999 99999999999999999999999999999887652 22345799999999998643
|
|
| >PLN02811 hydrolase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-31 Score=199.13 Aligned_cols=218 Identities=80% Similarity=1.260 Sum_probs=174.8
Q ss_pred cCcccccchhhHHHHHHHHHHHcCCCCCHHHHHHhcCCChHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHhhcCCCCCC
Q 026543 17 MDGLLLDTEKFYTEVQELILARYNKTFDWSLKAKMMGKKAIEAAQVFVEETGISDKLSAEDFLVQREETLQTLFPTSELM 96 (237)
Q Consensus 17 ~DGTL~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 96 (237)
|||||+|+...+..+|..+++++|+..+.+....+.|.+.......+....+++.....+.+......++........++
T Consensus 1 ~DGTL~Ds~~~~~~a~~~~~~~~g~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 80 (220)
T PLN02811 1 MDGLLLDTEKFYTEVQEKILARYGKTFDWSLKAKMMGKKAIEAARIFVEESGLSDSLSPEDFLVEREAMLQDLFPTSDLM 80 (220)
T ss_pred CCCcceecHHHHHHHHHHHHHHcCCCCCHHHHHHccCCCHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHhhCCCC
Confidence 79999999999999999999999998777777778888888878888887776522334555555555555544567889
Q ss_pred ccHHHHHHHHHhCCCCEEEEeCChhhHHHHHHhhhhhhhhhcceeeeCCCCCccCCCCCHHHHHHHHHHcCCCCCCCCcE
Q 026543 97 PGASHLIRHLHAKGIPMCVATGSLARHFELKTQKHRELFSLMHHVVRGDDPEVKQGKPSPDIFLAAAKRFEGGPIDSQEI 176 (237)
Q Consensus 97 ~~~~~~l~~l~~~g~~v~i~s~~~~~~~~~~~~~~~gl~~~f~~~~~~~~~~~~~~kp~~~~~~~~l~~~~~~~~~~~~~ 176 (237)
||+.++|+.|+++|++++|+||.........+.+..++..+|+.++++++.+.+..||+|+.|..++++++...++|++|
T Consensus 81 ~gv~e~l~~L~~~g~~~~i~S~~~~~~~~~~~~~~~~l~~~f~~i~~~~~~~~~~~KP~p~~~~~a~~~~~~~~~~~~~~ 160 (220)
T PLN02811 81 PGAERLVRHLHAKGIPIAIATGSHKRHFDLKTQRHGELFSLMHHVVTGDDPEVKQGKPAPDIFLAAARRFEDGPVDPGKV 160 (220)
T ss_pred ccHHHHHHHHHHCCCcEEEEeCCchhhHHHHHcccHHHHhhCCEEEECChhhccCCCCCcHHHHHHHHHhCCCCCCccce
Confidence 99999999999999999999997766555455666678899999998873335678999999999999993111899999
Q ss_pred EEEecCHHHHHHHHHcCCeEEEEcCCCCCcccccchhhhhhhhcccCCCCCCCCCCCC
Q 026543 177 LVFEDAPSGVLAAKNAGMSVVMVPDPRLDSSYHSNADQLLSSLLGFNPKDWGLPPFED 234 (237)
Q Consensus 177 ~~igD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~~~~el~~~l~~l~~~~~ 234 (237)
+||||+..|+++|+++|+.+|+|.++.........++++++++.|+...=++|+++-+
T Consensus 161 v~IgDs~~di~aA~~aG~~~i~v~~~~~~~~~~~~~d~vi~~~~e~~~~~~~~~~~~~ 218 (220)
T PLN02811 161 LVFEDAPSGVEAAKNAGMSVVMVPDPRLDKSYCKGADQVLSSLLDFKPEEWGLPPFPD 218 (220)
T ss_pred EEEeccHhhHHHHHHCCCeEEEEeCCCCcHhhhhchhhHhcCHhhCCHHHcCCCCCCC
Confidence 9999999999999999999999988765433345799999999998755566777654
|
|
| >PRK10725 fructose-1-P/6-phosphogluconate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.3e-31 Score=193.58 Aligned_cols=183 Identities=32% Similarity=0.466 Sum_probs=152.7
Q ss_pred CCccEEEEecCcccccchhhHHHHHHHHHHHcCCCCCHHHHHHhcCCChHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHH
Q 026543 8 KPITHVIFDMDGLLLDTEKFYTEVQELILARYNKTFDWSLKAKMMGKKAIEAAQVFVEETGISDKLSAEDFLVQREETLQ 87 (237)
Q Consensus 8 ~~~~~vifD~DGTL~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (237)
.++++|+||+||||+|+...+..++..+++++|.+.+........|.+..+.++.+....+.. ...+.+...+...+.
T Consensus 3 ~~~~~viFD~DGTLiDs~~~~~~a~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~ 80 (188)
T PRK10725 3 DRYAGLIFDMDGTILDTEPTHRKAWREVLGRYGLQFDEQAMVALNGSPTWRIAQAIIELNQAD--LDPHALAREKTEAVK 80 (188)
T ss_pred CcceEEEEcCCCcCccCHHHHHHHHHHHHHHcCCCCCHHHHHHhcCCCHHHHHHHHHHHhCCC--CCHHHHHHHHHHHHH
Confidence 457999999999999999999999999999999877767777778888877777787776655 555555554433333
Q ss_pred h-hcCCCCCCccHHHHHHHHHhCCCCEEEEeCChhhHHHHHHhhhhhhhhhcceeeeCCCCCccCCCCCHHHHHHHHHHc
Q 026543 88 T-LFPTSELMPGASHLIRHLHAKGIPMCVATGSLARHFELKTQKHRELFSLMHHVVRGDDPEVKQGKPSPDIFLAAAKRF 166 (237)
Q Consensus 88 ~-~~~~~~~~~~~~~~l~~l~~~g~~v~i~s~~~~~~~~~~~~~~~gl~~~f~~~~~~~~~~~~~~kp~~~~~~~~l~~~ 166 (237)
. ......++|+ .++|..|++. ++++|+||+...... ..++..|+..+|+.+++++ +.+..||+|+.|..+++++
T Consensus 81 ~~~~~~~~~~~~-~e~L~~L~~~-~~l~I~T~~~~~~~~-~~l~~~~l~~~fd~i~~~~--~~~~~KP~p~~~~~~~~~~ 155 (188)
T PRK10725 81 SMLLDSVEPLPL-IEVVKAWHGR-RPMAVGTGSESAIAE-ALLAHLGLRRYFDAVVAAD--DVQHHKPAPDTFLRCAQLM 155 (188)
T ss_pred HHHhccCCCccH-HHHHHHHHhC-CCEEEEcCCchHHHH-HHHHhCCcHhHceEEEehh--hccCCCCChHHHHHHHHHc
Confidence 3 2345677886 5899999876 899999996666555 4678889999999999999 8888999999999999999
Q ss_pred CCCCCCCCcEEEEecCHHHHHHHHHcCCeEEEEc
Q 026543 167 EGGPIDSQEILVFEDAPSGVLAAKNAGMSVVMVP 200 (237)
Q Consensus 167 ~~~~~~~~~~~~igD~~~Di~~a~~~G~~~i~v~ 200 (237)
+ ++|++|++|||+.+|+++|+++|+++|+|.
T Consensus 156 ~---~~~~~~l~igDs~~di~aA~~aG~~~i~~~ 186 (188)
T PRK10725 156 G---VQPTQCVVFEDADFGIQAARAAGMDAVDVR 186 (188)
T ss_pred C---CCHHHeEEEeccHhhHHHHHHCCCEEEeec
Confidence 9 999999999999999999999999999985
|
|
| >TIGR02009 PGMB-YQAB-SF beta-phosphoglucomutase family hydrolase | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.4e-31 Score=193.08 Aligned_cols=180 Identities=31% Similarity=0.495 Sum_probs=149.4
Q ss_pred ccEEEEecCcccccchhhHHHHHHHHHHHcCCCCCHHHHHHhcCCChHHHHHHHHHHhCCCCCCCHHHHH---HHHHHHH
Q 026543 10 ITHVIFDMDGLLLDTEKFYTEVQELILARYNKTFDWSLKAKMMGKKAIEAAQVFVEETGISDKLSAEDFL---VQREETL 86 (237)
Q Consensus 10 ~~~vifD~DGTL~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~ 86 (237)
+++|+||+||||+++...+..++..+++++|...+........|.+....++.+..+++.. .+.+.+. ..+...+
T Consensus 1 ~~~iiFD~DGTL~ds~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~ 78 (185)
T TIGR02009 1 YKAVIFDMDGVIVDTAPLHAQAWKHLADKYGIEFDKQYNTSLGGLSREDILRAILKLRKPG--LSLETIHQLAERKNELY 78 (185)
T ss_pred CCeEEEcCCCcccCChHHHHHHHHHHHHHcCCCCCHHHHHHcCCCCHHHHHHHHHHhcCCC--CCHHHHHHHHHHHHHHH
Confidence 5799999999999999999999999999999876655555667788888888888776543 4444433 3333444
Q ss_pred Hhhc--CCCCCCccHHHHHHHHHhCCCCEEEEeCChhhHHHHHHhhhhhhhhhcceeeeCCCCCccCCCCCHHHHHHHHH
Q 026543 87 QTLF--PTSELMPGASHLIRHLHAKGIPMCVATGSLARHFELKTQKHRELFSLMHHVVRGDDPEVKQGKPSPDIFLAAAK 164 (237)
Q Consensus 87 ~~~~--~~~~~~~~~~~~l~~l~~~g~~v~i~s~~~~~~~~~~~~~~~gl~~~f~~~~~~~~~~~~~~kp~~~~~~~~l~ 164 (237)
.+.. ....++||+.++|+.|+++|++++++||+ ... ...++..|+..+|+.+++++ ..+..||++..|..+++
T Consensus 79 ~~~~~~~~~~~~~g~~~~l~~l~~~g~~i~i~S~~--~~~-~~~l~~~~l~~~f~~v~~~~--~~~~~kp~~~~~~~~~~ 153 (185)
T TIGR02009 79 RELLRLTGAEVLPGIENFLKRLKKKGIAVGLGSSS--KNA-DRILAKLGLTDYFDAIVDAD--EVKEGKPHPETFLLAAE 153 (185)
T ss_pred HHHHhccCCCCCcCHHHHHHHHHHcCCeEEEEeCc--hhH-HHHHHHcChHHHCCEeeehh--hCCCCCCChHHHHHHHH
Confidence 4332 34789999999999999999999999996 333 35678889999999999998 78889999999999999
Q ss_pred HcCCCCCCCCcEEEEecCHHHHHHHHHcCCeEEEE
Q 026543 165 RFEGGPIDSQEILVFEDAPSGVLAAKNAGMSVVMV 199 (237)
Q Consensus 165 ~~~~~~~~~~~~~~igD~~~Di~~a~~~G~~~i~v 199 (237)
+++ ++|+++++|||+.+|+++|+++|+++++|
T Consensus 154 ~~~---~~~~~~v~IgD~~~di~aA~~~G~~~i~v 185 (185)
T TIGR02009 154 LLG---VSPNECVVFEDALAGVQAARAAGMFAVAV 185 (185)
T ss_pred HcC---CCHHHeEEEeCcHhhHHHHHHCCCeEeeC
Confidence 999 99999999999999999999999999875
|
All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509). |
| >TIGR01990 bPGM beta-phosphoglucomutase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.3e-31 Score=193.85 Aligned_cols=179 Identities=27% Similarity=0.421 Sum_probs=149.1
Q ss_pred EEEEecCcccccchhhHHHHHHHHHHHcCCCCCHHHHHHhcCCChHHHHHHHHHHhCCCCCCCHHHHHHHH---HHHHHh
Q 026543 12 HVIFDMDGLLLDTEKFYTEVQELILARYNKTFDWSLKAKMMGKKAIEAAQVFVEETGISDKLSAEDFLVQR---EETLQT 88 (237)
Q Consensus 12 ~vifD~DGTL~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~ 88 (237)
+|+||+||||+|+...+..++..+++.+|.+.+.+....+.+.+..+.++.+..+.+.. .+.+...+.. ...+.+
T Consensus 1 ~iiFD~DGTL~ds~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~ 78 (185)
T TIGR01990 1 AVIFDLDGVITDTAEYHYLAWKALADELGIPFDEEFNESLKGVSREDSLERILDLGGKK--YSEEEKEELAERKNDYYVE 78 (185)
T ss_pred CeEEcCCCccccChHHHHHHHHHHHHHcCCCCCHHHHHHhcCCChHHHHHHHHHhcCCC--CCHHHHHHHHHHHHHHHHH
Confidence 58999999999999999999999999999987777667777888888888888887765 4444333222 222222
Q ss_pred h---cCCCCCCccHHHHHHHHHhCCCCEEEEeCChhhHHHHHHhhhhhhhhhcceeeeCCCCCccCCCCCHHHHHHHHHH
Q 026543 89 L---FPTSELMPGASHLIRHLHAKGIPMCVATGSLARHFELKTQKHRELFSLMHHVVRGDDPEVKQGKPSPDIFLAAAKR 165 (237)
Q Consensus 89 ~---~~~~~~~~~~~~~l~~l~~~g~~v~i~s~~~~~~~~~~~~~~~gl~~~f~~~~~~~~~~~~~~kp~~~~~~~~l~~ 165 (237)
. .....++||+.++|+.|+++|++++|+||+... ...++..|+..+|+.+++++ +.+..||+|+.|..++++
T Consensus 79 ~~~~~~~~~~~pg~~~~L~~L~~~g~~~~i~s~~~~~---~~~l~~~~l~~~f~~~~~~~--~~~~~kp~p~~~~~~~~~ 153 (185)
T TIGR01990 79 LLKELTPADVLPGIKNLLDDLKKNNIKIALASASKNA---PTVLEKLGLIDYFDAIVDPA--EIKKGKPDPEIFLAAAEG 153 (185)
T ss_pred HHHhcCCcccCccHHHHHHHHHHCCCeEEEEeCCccH---HHHHHhcCcHhhCcEEEehh--hcCCCCCChHHHHHHHHH
Confidence 2 223578999999999999999999999985432 24678889999999999998 888899999999999999
Q ss_pred cCCCCCCCCcEEEEecCHHHHHHHHHcCCeEEEEc
Q 026543 166 FEGGPIDSQEILVFEDAPSGVLAAKNAGMSVVMVP 200 (237)
Q Consensus 166 ~~~~~~~~~~~~~igD~~~Di~~a~~~G~~~i~v~ 200 (237)
++ ++|++|++|||+.+|+++|+++|+++|+|.
T Consensus 154 ~~---~~~~~~v~vgD~~~di~aA~~aG~~~i~v~ 185 (185)
T TIGR01990 154 LG---VSPSECIGIEDAQAGIEAIKAAGMFAVGVG 185 (185)
T ss_pred cC---CCHHHeEEEecCHHHHHHHHHcCCEEEecC
Confidence 99 999999999999999999999999999874
|
The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state. |
| >TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-31 Score=199.26 Aligned_cols=198 Identities=24% Similarity=0.334 Sum_probs=157.1
Q ss_pred EEEecCcccccchhhHHHHHHHHHHHc-CC-CCCHHHHHHhcCCChHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHhhc
Q 026543 13 VIFDMDGLLLDTEKFYTEVQELILARY-NK-TFDWSLKAKMMGKKAIEAAQVFVEETGISDKLSAEDFLVQREETLQTLF 90 (237)
Q Consensus 13 vifD~DGTL~~~~~~~~~~~~~~~~~~-g~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (237)
|+|||||||+|+...+..+++.+++++ |. ..+.+.+.+..|.+....+ +.++.+ . ..........+ ...
T Consensus 1 iiFDlDGTL~Ds~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~----~~~~~~--~--~~~~~~~~~~~-~~~ 71 (205)
T TIGR01454 1 VVFDLDGVLVDSFAVMREAFAIAYREVVGDGPAPFEEYRRHLGRYFPDIM----RIMGLP--L--EMEEPFVRESY-RLA 71 (205)
T ss_pred CeecCcCccccCHHHHHHHHHHHHHHhcCCCCCCHHHHHHHhCccHHHHH----HHcCCC--H--HHHHHHHHHHH-Hhh
Confidence 689999999999999999999999884 76 3456666677776554443 334433 1 11111222222 234
Q ss_pred CCCCCCccHHHHHHHHHhCCCCEEEEeCChhhHHHHHHhhhhhhhhhcceeeeCCCCCccCCCCCHHHHHHHHHHcCCCC
Q 026543 91 PTSELMPGASHLIRHLHAKGIPMCVATGSLARHFELKTQKHRELFSLMHHVVRGDDPEVKQGKPSPDIFLAAAKRFEGGP 170 (237)
Q Consensus 91 ~~~~~~~~~~~~l~~l~~~g~~v~i~s~~~~~~~~~~~~~~~gl~~~f~~~~~~~~~~~~~~kp~~~~~~~~l~~~~~~~ 170 (237)
....++||+.++|+.|+++|++++|+||+...... ..++..|+..+|+.+++++ +....||++..+..++++++
T Consensus 72 ~~~~~~~g~~~~L~~L~~~g~~~~i~Sn~~~~~~~-~~l~~~~l~~~f~~i~~~~--~~~~~KP~~~~~~~~~~~~~--- 145 (205)
T TIGR01454 72 GEVEVFPGVPELLAELRADGVGTAIATGKSGPRAR-SLLEALGLLPLFDHVIGSD--EVPRPKPAPDIVREALRLLD--- 145 (205)
T ss_pred cccccCCCHHHHHHHHHHCCCeEEEEeCCchHHHH-HHHHHcCChhheeeEEecC--cCCCCCCChHHHHHHHHHcC---
Confidence 56889999999999999999999999997666554 5678889999999999998 77789999999999999999
Q ss_pred CCCCcEEEEecCHHHHHHHHHcCCeEEEEcCCCCCc--ccccchhhhhhhhcccCCC
Q 026543 171 IDSQEILVFEDAPSGVLAAKNAGMSVVMVPDPRLDS--SYHSNADQLLSSLLGFNPK 225 (237)
Q Consensus 171 ~~~~~~~~igD~~~Di~~a~~~G~~~i~v~~~~~~~--~~~~~~~~~~~~~~el~~~ 225 (237)
++|++|+||||+.+|+++|+++|++++++.++.... .....++++++++.|+...
T Consensus 146 ~~~~~~l~igD~~~Di~aA~~~Gi~~i~~~~g~~~~~~l~~~~~~~~~~~~~~l~~~ 202 (205)
T TIGR01454 146 VPPEDAVMVGDAVTDLASARAAGTATVAALWGEGDAGELLAARPDFLLRKPQSLLAL 202 (205)
T ss_pred CChhheEEEcCCHHHHHHHHHcCCeEEEEEecCCChhhhhhcCCCeeeCCHHHHHHH
Confidence 999999999999999999999999999999887532 3356789999999887543
|
The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity. |
| >PRK13222 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.2e-31 Score=199.47 Aligned_cols=211 Identities=21% Similarity=0.230 Sum_probs=168.1
Q ss_pred CCccEEEEecCcccccchhhHHHHHHHHHHHcCCC-CCHHHHHHhcCCChHHHHHHHHHHhCCCCCCCHHHHH---HHHH
Q 026543 8 KPITHVIFDMDGLLLDTEKFYTEVQELILARYNKT-FDWSLKAKMMGKKAIEAAQVFVEETGISDKLSAEDFL---VQRE 83 (237)
Q Consensus 8 ~~~~~vifD~DGTL~~~~~~~~~~~~~~~~~~g~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~ 83 (237)
+++++|+||+||||+++...+..++..+++++|.+ .+...+....+.+.....+..+...+.. .+.+... ..+.
T Consensus 4 ~~~~~iiFD~DGTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~ 81 (226)
T PRK13222 4 MDIRAVAFDLDGTLVDSAPDLAAAVNAALAALGLPPAGEERVRTWVGNGADVLVERALTWAGRE--PDEELLEKLRELFD 81 (226)
T ss_pred CcCcEEEEcCCcccccCHHHHHHHHHHHHHHCCCCCCCHHHHHHHhCccHHHHHHHHHhhccCC--ccHHHHHHHHHHHH
Confidence 45899999999999999988899999999999985 3555566677777766666665554433 3333333 3333
Q ss_pred HHHHhhc-CCCCCCccHHHHHHHHHhCCCCEEEEeCChhhHHHHHHhhhhhhhhhcceeeeCCCCCccCCCCCHHHHHHH
Q 026543 84 ETLQTLF-PTSELMPGASHLIRHLHAKGIPMCVATGSLARHFELKTQKHRELFSLMHHVVRGDDPEVKQGKPSPDIFLAA 162 (237)
Q Consensus 84 ~~~~~~~-~~~~~~~~~~~~l~~l~~~g~~v~i~s~~~~~~~~~~~~~~~gl~~~f~~~~~~~~~~~~~~kp~~~~~~~~ 162 (237)
..+.... ....++||+.++++.|+++|++++++||+...... .+++..|+..+|+.+++++ .....||+|..+..+
T Consensus 82 ~~~~~~~~~~~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~-~~l~~~~l~~~f~~~~~~~--~~~~~kp~~~~~~~~ 158 (226)
T PRK13222 82 RHYAENVAGGSRLYPGVKETLAALKAAGYPLAVVTNKPTPFVA-PLLEALGIADYFSVVIGGD--SLPNKKPDPAPLLLA 158 (226)
T ss_pred HHHHHhccccCccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHH-HHHHHcCCccCccEEEcCC--CCCCCCcChHHHHHH
Confidence 3343332 35789999999999999999999999997665444 5678889999999999988 777889999999999
Q ss_pred HHHcCCCCCCCCcEEEEecCHHHHHHHHHcCCeEEEEcCCCCC--cccccchhhhhhhhcccCCCC
Q 026543 163 AKRFEGGPIDSQEILVFEDAPSGVLAAKNAGMSVVMVPDPRLD--SSYHSNADQLLSSLLGFNPKD 226 (237)
Q Consensus 163 l~~~~~~~~~~~~~~~igD~~~Di~~a~~~G~~~i~v~~~~~~--~~~~~~~~~~~~~~~el~~~l 226 (237)
+++++ +++++|++|||+.+|+++|+++|+.+++|.++... +.....+++++.++.++...+
T Consensus 159 ~~~~~---~~~~~~i~igD~~~Di~~a~~~g~~~i~v~~g~~~~~~~~~~~~~~~i~~~~~l~~~l 221 (226)
T PRK13222 159 CEKLG---LDPEEMLFVGDSRNDIQAARAAGCPSVGVTYGYNYGEPIALSEPDVVIDHFAELLPLL 221 (226)
T ss_pred HHHcC---CChhheEEECCCHHHHHHHHHCCCcEEEECcCCCCccchhhcCCCEEECCHHHHHHHH
Confidence 99999 99999999999999999999999999999987652 233457889999999986543
|
|
| >PRK13225 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.98 E-value=1.6e-31 Score=206.07 Aligned_cols=204 Identities=19% Similarity=0.241 Sum_probs=161.4
Q ss_pred CccEEEEecCcccccchhhHHHHHHHHHHHcCCC-CCHHHHHHhcCCChHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHH
Q 026543 9 PITHVIFDMDGLLLDTEKFYTEVQELILARYNKT-FDWSLKAKMMGKKAIEAAQVFVEETGISDKLSAEDFLVQREETLQ 87 (237)
Q Consensus 9 ~~~~vifD~DGTL~~~~~~~~~~~~~~~~~~g~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (237)
.+++|+|||||||+|+.+.+..++..+++++|.. .+.+.+.+..+.+... +.+.++.+. ...+++...+...+.
T Consensus 61 ~~k~vIFDlDGTLiDS~~~~~~a~~~~~~~~G~~~~~~~~~~~~~g~~~~~----i~~~~~~~~-~~~~~~~~~~~~~~~ 135 (273)
T PRK13225 61 TLQAIIFDFDGTLVDSLPTVVAIANAHAPDFGYDPIDERDYAQLRQWSSRT----IVRRAGLSP-WQQARLLQRVQRQLG 135 (273)
T ss_pred hcCEEEECCcCccccCHHHHHHHHHHHHHHCCCCCCCHHHHHHHhCccHHH----HHHHcCCCH-HHHHHHHHHHHHHHH
Confidence 5899999999999999999999999999999985 5556666666655443 334444331 223344444555555
Q ss_pred hhcCCCCCCccHHHHHHHHHhCCCCEEEEeCChhhHHHHHHhhhhhhhhhcceeeeCCCCCccCCCCCHHHHHHHHHHcC
Q 026543 88 TLFPTSELMPGASHLIRHLHAKGIPMCVATGSLARHFELKTQKHRELFSLMHHVVRGDDPEVKQGKPSPDIFLAAAKRFE 167 (237)
Q Consensus 88 ~~~~~~~~~~~~~~~l~~l~~~g~~v~i~s~~~~~~~~~~~~~~~gl~~~f~~~~~~~~~~~~~~kp~~~~~~~~l~~~~ 167 (237)
.......++||+.++|+.|+++|++++|+||+....+. ..++..|+..+|+.+++++ .. ++++..+..++++++
T Consensus 136 ~~~~~~~l~pg~~e~L~~L~~~gi~laIvSn~~~~~~~-~~L~~~gl~~~F~~vi~~~--~~---~~k~~~~~~~l~~~~ 209 (273)
T PRK13225 136 DCLPALQLFPGVADLLAQLRSRSLCLGILSSNSRQNIE-AFLQRQGLRSLFSVVQAGT--PI---LSKRRALSQLVAREG 209 (273)
T ss_pred hhcccCCcCCCHHHHHHHHHHCCCeEEEEeCCCHHHHH-HHHHHcCChhheEEEEecC--CC---CCCHHHHHHHHHHhC
Confidence 55566789999999999999999999999997766555 5688889999999988776 43 345789999999999
Q ss_pred CCCCCCCcEEEEecCHHHHHHHHHcCCeEEEEcCCCCCc--ccccchhhhhhhhcccCCCC
Q 026543 168 GGPIDSQEILVFEDAPSGVLAAKNAGMSVVMVPDPRLDS--SYHSNADQLLSSLLGFNPKD 226 (237)
Q Consensus 168 ~~~~~~~~~~~igD~~~Di~~a~~~G~~~i~v~~~~~~~--~~~~~~~~~~~~~~el~~~l 226 (237)
++|++|++|||+.+|+++|+++|+.+|+|..+.... .....++++++++.||...+
T Consensus 210 ---~~p~~~l~IGDs~~Di~aA~~AG~~~I~v~~g~~~~~~l~~~~ad~~i~~~~eL~~~~ 267 (273)
T PRK13225 210 ---WQPAAVMYVGDETRDVEAARQVGLIAVAVTWGFNDRQSLVAACPDWLLETPSDLLQAV 267 (273)
T ss_pred ---cChhHEEEECCCHHHHHHHHHCCCeEEEEecCCCCHHHHHHCCCCEEECCHHHHHHHH
Confidence 999999999999999999999999999999876633 33567999999999886543
|
|
| >TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254 | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.9e-30 Score=195.54 Aligned_cols=203 Identities=17% Similarity=0.234 Sum_probs=153.0
Q ss_pred ccEEEEecCcccccchhhHHHHHHHHHHHcCCCCCHHHHHHhcC-------------CChHH----HHHHHHHHhCCCCC
Q 026543 10 ITHVIFDMDGLLLDTEKFYTEVQELILARYNKTFDWSLKAKMMG-------------KKAIE----AAQVFVEETGISDK 72 (237)
Q Consensus 10 ~~~vifD~DGTL~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~-------------~~~~~----~~~~~~~~~~~~~~ 72 (237)
+|+|+||+||||+|+...+..++..+++++|...+......+.+ .+... .+..+.+..+..
T Consensus 1 ~k~viFD~DGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 78 (224)
T TIGR02254 1 YKTLLFDLDDTILDFQAAEALALRLLFEDQGIPLTEDMFAQYKEINQGLWRAYEEGKITKDEVVNTRFSALLKEYNTE-- 78 (224)
T ss_pred CCEEEEcCcCcccccchHHHHHHHHHHHHhCCCccHHHHHHHHHHhHHHHHHHHcCCCCHHHHHHHHHHHHHHHhCCC--
Confidence 58999999999999999999999999999998654433221111 01111 122233334432
Q ss_pred CCHHHHHHHHHHHHHhhcCCCCCCccHHHHHHHHHhCCCCEEEEeCChhhHHHHHHhhhhhhhhhcceeeeCCCCCccCC
Q 026543 73 LSAEDFLVQREETLQTLFPTSELMPGASHLIRHLHAKGIPMCVATGSLARHFELKTQKHRELFSLMHHVVRGDDPEVKQG 152 (237)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~v~i~s~~~~~~~~~~~~~~~gl~~~f~~~~~~~~~~~~~~ 152 (237)
...+.+.+.+.. .......++||+.++|+.|+++ ++++|+||+...... ..++..++..+|+.+++++ +.+..
T Consensus 79 ~~~~~~~~~~~~---~~~~~~~~~~g~~~~L~~l~~~-~~~~i~Sn~~~~~~~-~~l~~~~l~~~fd~i~~~~--~~~~~ 151 (224)
T TIGR02254 79 ADEALLNQKYLR---FLEEGHQLLPGAFELMENLQQK-FRLYIVTNGVRETQY-KRLRKSGLFPFFDDIFVSE--DAGIQ 151 (224)
T ss_pred CcHHHHHHHHHH---HHhccCeeCccHHHHHHHHHhc-CcEEEEeCCchHHHH-HHHHHCCcHhhcCEEEEcC--ccCCC
Confidence 222222222222 2223468999999999999999 999999997766555 5678889999999999998 88889
Q ss_pred CCCHHHHHHHHHHc-CCCCCCCCcEEEEecCH-HHHHHHHHcCCeEEEEcCCCCCcccccchhhhhhhhcccCC
Q 026543 153 KPSPDIFLAAAKRF-EGGPIDSQEILVFEDAP-SGVLAAKNAGMSVVMVPDPRLDSSYHSNADQLLSSLLGFNP 224 (237)
Q Consensus 153 kp~~~~~~~~l~~~-~~~~~~~~~~~~igD~~-~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~~~~el~~ 224 (237)
||+|..|..+++++ + ++|++|+||||+. +|+++|+++|+.++++..+.........++++++++.||..
T Consensus 152 KP~~~~~~~~~~~~~~---~~~~~~v~igD~~~~di~~A~~~G~~~i~~~~~~~~~~~~~~~~~~~~~~~el~~ 222 (224)
T TIGR02254 152 KPDKEIFNYALERMPK---FSKEEVLMIGDSLTADIKGGQNAGLDTCWMNPDMHPNPDDIIPTYEIRSLEELYE 222 (224)
T ss_pred CCCHHHHHHHHHHhcC---CCchheEEECCCcHHHHHHHHHCCCcEEEECCCCCCCCCCCCCceEECCHHHHHh
Confidence 99999999999999 9 9999999999998 89999999999999998765543344567888999988754
|
This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases. |
| >KOG2914 consensus Predicted haloacid-halidohydrolase and related hydrolases [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.6e-29 Score=184.91 Aligned_cols=215 Identities=47% Similarity=0.776 Sum_probs=192.4
Q ss_pred CCCCccEEEEecCcccccchhhHHHHHHHHHHHcCCCCCHHHHHHhcCCChHHHHHHHHHHhCCCCCCCHHHHHHHHHHH
Q 026543 6 SKKPITHVIFDMDGLLLDTEKFYTEVQELILARYNKTFDWSLKAKMMGKKAIEAAQVFVEETGISDKLSAEDFLVQREET 85 (237)
Q Consensus 6 ~~~~~~~vifD~DGTL~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (237)
.+..+.+++||+||||++++..+.+.+..++.+||...++....+..|....+..+.+..++..+ .+.+++....+..
T Consensus 6 ~~~~~~~~lfD~dG~lvdte~~y~~~~~~~~~~ygk~~~~~~~~~~mG~~~~eaa~~~~~~~~dp--~s~ee~~~e~~~~ 83 (222)
T KOG2914|consen 6 LSLKVSACLFDMDGTLVDTEDLYTEAWQELLDRYGKPYPWDVKVKSMGKRTSEAARLFVKKLPDP--VSREEFNKEEEEI 83 (222)
T ss_pred cccceeeEEEecCCcEEecHHHHHHHHHHHHHHcCCCChHHHHHHHcCCCHHHHHHHHHhhcCCC--CCHHHHHHHHHHH
Confidence 34457899999999999999999999999999999999999999999999999999999877777 9999999888888
Q ss_pred HHhhcCCCCCCccHHHHHHHHHhCCCCEEEEeCChhhHHHHHHhhhhhhhhhcceeeeCCCCCccCCCCCHHHHHHHHHH
Q 026543 86 LQTLFPTSELMPGASHLIRHLHAKGIPMCVATGSLARHFELKTQKHRELFSLMHHVVRGDDPEVKQGKPSPDIFLAAAKR 165 (237)
Q Consensus 86 ~~~~~~~~~~~~~~~~~l~~l~~~g~~v~i~s~~~~~~~~~~~~~~~gl~~~f~~~~~~~~~~~~~~kp~~~~~~~~l~~ 165 (237)
.........+.||+.++++.|+.+|++++++|+++...+...+.++.++...|+.++.+++.++..+||.|++|..++++
T Consensus 84 ~~~~~~~~~~~PGa~kLv~~L~~~gip~alat~s~~~~~~~k~~~~~~~~~~f~~~v~~d~~~v~~gKP~Pdi~l~A~~~ 163 (222)
T KOG2914|consen 84 LDRLFMNSILMPGAEKLVNHLKNNGIPVALATSSTSASFELKISRHEDIFKNFSHVVLGDDPEVKNGKPDPDIYLKAAKR 163 (222)
T ss_pred HHHhccccccCCcHHHHHHHHHhCCCCeeEEecCCcccHHHHHHHhhHHHHhcCCCeecCCccccCCCCCchHHHHHHHh
Confidence 88888889999999999999999999999999988887777766666688889988886655888999999999999999
Q ss_pred cCCCCCCC-CcEEEEecCHHHHHHHHHcCCeEEEEcCCCCCcccccchhhhhhhhcccCCC
Q 026543 166 FEGGPIDS-QEILVFEDAPSGVLAAKNAGMSVVMVPDPRLDSSYHSNADQLLSSLLGFNPK 225 (237)
Q Consensus 166 ~~~~~~~~-~~~~~igD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~~~~el~~~ 225 (237)
+| .+| +.|++++|+++.+++|+.+||.+|+|++..........++.+++++.++.+.
T Consensus 164 l~---~~~~~k~lVfeds~~Gv~aa~aagm~vi~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (222)
T KOG2914|consen 164 LG---VPPPSKCLVFEDSPVGVQAAKAAGMQVVGVATPDLSNLFSAGATLILESLEDFKPE 221 (222)
T ss_pred cC---CCCccceEEECCCHHHHHHHHhcCCeEEEecCCCcchhhhhccceecccccccCcC
Confidence 99 888 9999999999999999999999999999666666778888888888877543
|
|
| >PRK09449 dUMP phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=9.5e-30 Score=192.63 Aligned_cols=200 Identities=18% Similarity=0.241 Sum_probs=144.6
Q ss_pred CccEEEEecCcccccchhhHHHHHHHHHHHcCCCCCHHHHHHh--cCCC-----------hHHH----HHHHHHHhCCCC
Q 026543 9 PITHVIFDMDGLLLDTEKFYTEVQELILARYNKTFDWSLKAKM--MGKK-----------AIEA----AQVFVEETGISD 71 (237)
Q Consensus 9 ~~~~vifD~DGTL~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~--~~~~-----------~~~~----~~~~~~~~~~~~ 71 (237)
++|+|+||+||||+|.. ...++..+++++|...+.+....+ .+.+ ..+. .+.+.+.++.
T Consensus 2 ~~k~iiFDlDGTLid~~--~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 77 (224)
T PRK09449 2 KYDWILFDADETLFHFD--AFAGLQRMFSRYGVDFTAEDFQDYQAVNKPLWVDYQNGAITALQLQHTRFESWAEKLNV-- 77 (224)
T ss_pred CccEEEEcCCCchhcch--hhHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHcCC--
Confidence 58999999999999854 356778888888887655443332 1111 1111 0112222222
Q ss_pred CCCHHHHHHHHHHHHHhhcCCCCCCccHHHHHHHHHhCCCCEEEEeCChhhHHHHHHhhhhhhhhhcceeeeCCCCCccC
Q 026543 72 KLSAEDFLVQREETLQTLFPTSELMPGASHLIRHLHAKGIPMCVATGSLARHFELKTQKHRELFSLMHHVVRGDDPEVKQ 151 (237)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~v~i~s~~~~~~~~~~~~~~~gl~~~f~~~~~~~~~~~~~ 151 (237)
....+.+.+ .........++||+.++|+.|+ +|++++|+||+...... ..++..|+..+|+.+++++ +.+.
T Consensus 78 --~~~~~~~~~---~~~~~~~~~~~~g~~~~L~~L~-~~~~~~i~Tn~~~~~~~-~~l~~~~l~~~fd~v~~~~--~~~~ 148 (224)
T PRK09449 78 --TPGELNSAF---LNAMAEICTPLPGAVELLNALR-GKVKMGIITNGFTELQQ-VRLERTGLRDYFDLLVISE--QVGV 148 (224)
T ss_pred --CHHHHHHHH---HHHHhhcCccCccHHHHHHHHH-hCCeEEEEeCCcHHHHH-HHHHhCChHHHcCEEEEEC--ccCC
Confidence 122222222 2222234679999999999999 57999999997766554 4578889999999999998 8888
Q ss_pred CCCCHHHHHHHHHHcCCCCCCC-CcEEEEecCH-HHHHHHHHcCCeEEEEcCCCCCcccccchhhhhhhhcccCC
Q 026543 152 GKPSPDIFLAAAKRFEGGPIDS-QEILVFEDAP-SGVLAAKNAGMSVVMVPDPRLDSSYHSNADQLLSSLLGFNP 224 (237)
Q Consensus 152 ~kp~~~~~~~~l~~~~~~~~~~-~~~~~igD~~-~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~~~~el~~ 224 (237)
.||+|..|..+++++| +.+ ++|+||||+. +|+++|+++|+.++++..+.........++++++++.||..
T Consensus 149 ~KP~p~~~~~~~~~~~---~~~~~~~~~vgD~~~~Di~~A~~aG~~~i~~~~~~~~~~~~~~~~~~i~~~~el~~ 220 (224)
T PRK09449 149 AKPDVAIFDYALEQMG---NPDRSRVLMVGDNLHSDILGGINAGIDTCWLNAHGREQPEGIAPTYQVSSLSELEQ 220 (224)
T ss_pred CCCCHHHHHHHHHHcC---CCCcccEEEEcCCcHHHHHHHHHCCCcEEEECCCCCCCCCCCCCeEEECCHHHHHH
Confidence 9999999999999999 865 7999999998 79999999999999998644322223467888999988754
|
|
| >PLN02779 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.7e-29 Score=196.65 Aligned_cols=213 Identities=24% Similarity=0.323 Sum_probs=152.2
Q ss_pred CCccEEEEecCcccccch-hhHHHHHHHHHHHcCC-CC--CHHHHHH--hcCCChHHHHHHHHHHhCCC----C--CCCH
Q 026543 8 KPITHVIFDMDGLLLDTE-KFYTEVQELILARYNK-TF--DWSLKAK--MMGKKAIEAAQVFVEETGIS----D--KLSA 75 (237)
Q Consensus 8 ~~~~~vifD~DGTL~~~~-~~~~~~~~~~~~~~g~-~~--~~~~~~~--~~~~~~~~~~~~~~~~~~~~----~--~~~~ 75 (237)
..+++|+|||||||+|+. ..+..+|..+++++|. .. +.+.+.. ..+.+.......+ ...+.. . ....
T Consensus 38 ~~~k~VIFDlDGTLvDS~~~~~~~a~~~~l~~~G~~~~~~~~~~~~~~~~~g~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 116 (286)
T PLN02779 38 ALPEALLFDCDGVLVETERDGHRVAFNDAFKEFGLRPVEWDVELYDELLNIGGGKERMTWYF-NENGWPTSTIEKAPKDE 116 (286)
T ss_pred cCCcEEEEeCceeEEccccHHHHHHHHHHHHHcCCCCCCCCHHHHHHHHccCCChHHHHHHH-HHcCCCccccccCCccc
Confidence 457999999999999999 9999999999999998 33 2332222 2454544443333 222222 0 0011
Q ss_pred ---HH----HHHHHHHHHHhhcC--CCCCCccHHHHHHHHHhCCCCEEEEeCChhhHHHHHHhhhhhhhhh---cceeee
Q 026543 76 ---ED----FLVQREETLQTLFP--TSELMPGASHLIRHLHAKGIPMCVATGSLARHFELKTQKHRELFSL---MHHVVR 143 (237)
Q Consensus 76 ---~~----~~~~~~~~~~~~~~--~~~~~~~~~~~l~~l~~~g~~v~i~s~~~~~~~~~~~~~~~gl~~~---f~~~~~ 143 (237)
+. +.......+.+... .+.++||+.++|..|+++|++++|+||+...... .+++..+...+ |+.+ +
T Consensus 117 e~~~~~~~~~~~~~~~~y~~~~~~~~~~l~pGv~elL~~L~~~g~~l~IvTn~~~~~~~-~~l~~~~~~~~~~~~~~v-~ 194 (286)
T PLN02779 117 EERKELVDSLHDRKTELFKELIESGALPLRPGVLRLMDEALAAGIKVAVCSTSNEKAVS-KIVNTLLGPERAQGLDVF-A 194 (286)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHhcCCCchhhHHHHHHHHHHCCCeEEEEeCCCHHHHH-HHHHHhccccccCceEEE-e
Confidence 11 22222233333322 2589999999999999999999999997766555 34554432333 3444 6
Q ss_pred CCCCCccCCCCCHHHHHHHHHHcCCCCCCCCcEEEEecCHHHHHHHHHcCCeEEEEcCCCCCcccccchhhhhhhhcccC
Q 026543 144 GDDPEVKQGKPSPDIFLAAAKRFEGGPIDSQEILVFEDAPSGVLAAKNAGMSVVMVPDPRLDSSYHSNADQLLSSLLGFN 223 (237)
Q Consensus 144 ~~~~~~~~~kp~~~~~~~~l~~~~~~~~~~~~~~~igD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~~~~el~ 223 (237)
++ +.+..||+|+.|..+++++| ++|++|++|||+.+|+++|+++|+.+|+|.++.........++++++++.|+.
T Consensus 195 ~~--~~~~~KP~p~~~~~a~~~~~---~~p~~~l~IGDs~~Di~aA~~aG~~~i~v~~g~~~~~~l~~ad~vi~~~~~l~ 269 (286)
T PLN02779 195 GD--DVPKKKPDPDIYNLAAETLG---VDPSRCVVVEDSVIGLQAAKAAGMRCIVTKSSYTADEDFSGADAVFDCLGDVP 269 (286)
T ss_pred cc--ccCCCCCCHHHHHHHHHHhC---cChHHEEEEeCCHHhHHHHHHcCCEEEEEccCCccccccCCCcEEECChhhcc
Confidence 66 67788999999999999999 99999999999999999999999999999887654333357899999999987
Q ss_pred CCCCC
Q 026543 224 PKDWG 228 (237)
Q Consensus 224 ~~l~~ 228 (237)
..-++
T Consensus 270 ~~~~~ 274 (286)
T PLN02779 270 LEDFD 274 (286)
T ss_pred hhhhH
Confidence 55443
|
|
| >PRK10748 flavin mononucleotide phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=8.7e-30 Score=194.02 Aligned_cols=211 Identities=18% Similarity=0.175 Sum_probs=149.2
Q ss_pred CCccCCCCCccEEEEecCcccccchhhHHHHHHHHHHHcCCC------CCHHHHHHhcC---C-------C----hHHHH
Q 026543 1 MAAVSSKKPITHVIFDMDGLLLDTEKFYTEVQELILARYNKT------FDWSLKAKMMG---K-------K----AIEAA 60 (237)
Q Consensus 1 m~~~~~~~~~~~vifD~DGTL~~~~~~~~~~~~~~~~~~g~~------~~~~~~~~~~~---~-------~----~~~~~ 60 (237)
|....++.++|+|+||+||||+|+.+.+..++..+++.++.. .....+..+.+ . . ....+
T Consensus 1 ~~~~~~~~~~k~iiFDlDGTL~D~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 80 (238)
T PRK10748 1 MRFYRPLGRISALTFDLDDTLYDNRPVILRTEQEALAFVQNYHPALRSFQNEDLQRLRQALREAEPEIYHDVTRWRWRAI 80 (238)
T ss_pred CccccCCCCceeEEEcCcccccCChHHHHHHHHHHHHHHHHhCcchhhCCHHHHHHHHHHHHHhCchhhCcHHHHHHHHH
Confidence 433455667899999999999999999888888776554211 11111111000 0 0 11223
Q ss_pred HHHHHHhCCCCCCCHH-HHHHHHHHHHHhhcCCCCCCccHHHHHHHHHhCCCCEEEEeCChhhHHHHHHhhhhhhhhhcc
Q 026543 61 QVFVEETGISDKLSAE-DFLVQREETLQTLFPTSELMPGASHLIRHLHAKGIPMCVATGSLARHFELKTQKHRELFSLMH 139 (237)
Q Consensus 61 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~v~i~s~~~~~~~~~~~~~~~gl~~~f~ 139 (237)
..+++.++++ .... .........+..+.....++||+.++|+.|+++ ++++++||++.. ++..|+..+|+
T Consensus 81 ~~~~~~~g~~--~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~L~~L~~~-~~l~i~Tn~~~~------~~~~gl~~~fd 151 (238)
T PRK10748 81 EQAMLDAGLS--AEEASAGADAAMINFAKWRSRIDVPQATHDTLKQLAKK-WPLVAITNGNAQ------PELFGLGDYFE 151 (238)
T ss_pred HHHHHHcCCC--HHHHHHHHHHHHHHHHHHhhcCCCCccHHHHHHHHHcC-CCEEEEECCCch------HHHCCcHHhhc
Confidence 4455666654 2111 111111122333334578999999999999876 999999997654 35678999999
Q ss_pred eeeeCCCCCccCCCCCHHHHHHHHHHcCCCCCCCCcEEEEecCH-HHHHHHHHcCCeEEEEcCCCCCc----ccccchhh
Q 026543 140 HVVRGDDPEVKQGKPSPDIFLAAAKRFEGGPIDSQEILVFEDAP-SGVLAAKNAGMSVVMVPDPRLDS----SYHSNADQ 214 (237)
Q Consensus 140 ~~~~~~~~~~~~~kp~~~~~~~~l~~~~~~~~~~~~~~~igD~~-~Di~~a~~~G~~~i~v~~~~~~~----~~~~~~~~ 214 (237)
.+++++ +.+..||++..|..+++++| ++|++|+||||+. .|+.+|+++|+.+++|..+.... .....++.
T Consensus 152 ~i~~~~--~~~~~KP~p~~~~~a~~~~~---~~~~~~~~VGD~~~~Di~~A~~aG~~~i~v~~~~~~~~~~~~~~~~p~~ 226 (238)
T PRK10748 152 FVLRAG--PHGRSKPFSDMYHLAAEKLN---VPIGEILHVGDDLTTDVAGAIRCGMQACWINPENGDLMQTWDSRLLPHI 226 (238)
T ss_pred eeEecc--cCCcCCCcHHHHHHHHHHcC---CChhHEEEEcCCcHHHHHHHHHCCCeEEEEcCCCccccccccccCCCCE
Confidence 999998 78889999999999999999 9999999999994 99999999999999998765421 11245778
Q ss_pred hhhhhcccCCC
Q 026543 215 LLSSLLGFNPK 225 (237)
Q Consensus 215 ~~~~~~el~~~ 225 (237)
.+.+++||.+.
T Consensus 227 ~i~~l~el~~~ 237 (238)
T PRK10748 227 EISRLASLTSL 237 (238)
T ss_pred EECCHHHHHhh
Confidence 89999887554
|
|
| >PRK06698 bifunctional 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase/phosphatase; Validated | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.3e-29 Score=209.90 Aligned_cols=207 Identities=15% Similarity=0.190 Sum_probs=160.6
Q ss_pred CCccEEEEecCcccccchhhHHHHHHHHHHHcC------CCCCHHHHHHhcCCChHHHHHHHHHHhCCCCCCCHHHHHHH
Q 026543 8 KPITHVIFDMDGLLLDTEKFYTEVQELILARYN------KTFDWSLKAKMMGKKAIEAAQVFVEETGISDKLSAEDFLVQ 81 (237)
Q Consensus 8 ~~~~~vifD~DGTL~~~~~~~~~~~~~~~~~~g------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (237)
+++++|+|||||||+|+...+..+|.+++++++ ...+.+.+....|.+..+.++.+....+.. ..+.....
T Consensus 239 ~m~k~vIFDlDGTLiDs~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~l~~~~~~~---~~~~~~~~ 315 (459)
T PRK06698 239 EMLQALIFDMDGTLFQTDKILELSLDDTFDHLRSLQLWDTVTPIDKYREIMGVPLPKVWEALLPDHSLE---IREQTDAY 315 (459)
T ss_pred HhhhheeEccCCceecchhHHHHHHHHHHHHHhhhcccCCCCCHHHHHHHcCCChHHHHHHHhhhcchh---HHHHHHHH
Confidence 347999999999999999999999999998874 223456677778888887777776544322 12233333
Q ss_pred HHHHHHhhc--CCCCCCccHHHHHHHHHhCCCCEEEEeCChhhHHHHHHhhhhhhhhhcceeeeCCCCCccCCCCCHHHH
Q 026543 82 REETLQTLF--PTSELMPGASHLIRHLHAKGIPMCVATGSLARHFELKTQKHRELFSLMHHVVRGDDPEVKQGKPSPDIF 159 (237)
Q Consensus 82 ~~~~~~~~~--~~~~~~~~~~~~l~~l~~~g~~v~i~s~~~~~~~~~~~~~~~gl~~~f~~~~~~~~~~~~~~kp~~~~~ 159 (237)
+...+.... ...+++||+.++|+.|+++|++++|+||+...... ..+++.|+..+|+.+++++ +.. .||+|..+
T Consensus 316 ~~~~~~~~~~~~~~~l~pG~~e~L~~Lk~~g~~l~IvS~~~~~~~~-~~l~~~~l~~~f~~i~~~d--~v~-~~~kP~~~ 391 (459)
T PRK06698 316 FLERLIENIKSGKGALYPNVKEIFTYIKENNCSIYIASNGLTEYLR-AIVSYYDLDQWVTETFSIE--QIN-SLNKSDLV 391 (459)
T ss_pred HHHHhHHHHhhcCCCcCCCHHHHHHHHHHCCCeEEEEeCCchHHHH-HHHHHCCcHhhcceeEecC--CCC-CCCCcHHH
Confidence 333333322 34689999999999999999999999997776655 4678889999999999998 553 46778899
Q ss_pred HHHHHHcCCCCCCCCcEEEEecCHHHHHHHHHcCCeEEEEcCCCCCcccccchhhhhhhhcccCCCC
Q 026543 160 LAAAKRFEGGPIDSQEILVFEDAPSGVLAAKNAGMSVVMVPDPRLDSSYHSNADQLLSSLLGFNPKD 226 (237)
Q Consensus 160 ~~~l~~~~~~~~~~~~~~~igD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~~~~el~~~l 226 (237)
..++++++ |++|++|||+.+|+++|+++|+.+|++.++.........++++++++.|+...+
T Consensus 392 ~~al~~l~-----~~~~v~VGDs~~Di~aAk~AG~~~I~v~~~~~~~~~~~~~d~~i~~l~el~~~l 453 (459)
T PRK06698 392 KSILNKYD-----IKEAAVVGDRLSDINAAKDNGLIAIGCNFDFAQEDELAQADIVIDDLLELKGIL 453 (459)
T ss_pred HHHHHhcC-----cceEEEEeCCHHHHHHHHHCCCeEEEEeCCCCcccccCCCCEEeCCHHHHHHHH
Confidence 99998876 579999999999999999999999999887653333456899999999886544
|
|
| >PRK14988 GMP/IMP nucleotidase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=5.9e-29 Score=187.46 Aligned_cols=128 Identities=16% Similarity=0.207 Sum_probs=105.0
Q ss_pred CCCCCCccHHHHHHHHHhCCCCEEEEeCChhhHHHHHHhhhhhhhhhcceeeeCCCCCccCCCCCHHHHHHHHHHcCCCC
Q 026543 91 PTSELMPGASHLIRHLHAKGIPMCVATGSLARHFELKTQKHRELFSLMHHVVRGDDPEVKQGKPSPDIFLAAAKRFEGGP 170 (237)
Q Consensus 91 ~~~~~~~~~~~~l~~l~~~g~~v~i~s~~~~~~~~~~~~~~~gl~~~f~~~~~~~~~~~~~~kp~~~~~~~~l~~~~~~~ 170 (237)
....++||+.++|+.|+++|++++|+||+....... .++..|+..+|+.+++++ +.+..||+|+.|..+++++|
T Consensus 90 ~~~~~~~g~~e~L~~Lk~~g~~~~i~Tn~~~~~~~~-~l~~~~l~~~fd~iv~s~--~~~~~KP~p~~~~~~~~~~~--- 163 (224)
T PRK14988 90 PRAVLREDTVPFLEALKASGKRRILLTNAHPHNLAV-KLEHTGLDAHLDLLLSTH--TFGYPKEDQRLWQAVAEHTG--- 163 (224)
T ss_pred ccCCcCCCHHHHHHHHHhCCCeEEEEeCcCHHHHHH-HHHHCCcHHHCCEEEEee--eCCCCCCCHHHHHHHHHHcC---
Confidence 457899999999999999999999999977666554 467789999999999998 88889999999999999999
Q ss_pred CCCCcEEEEecCHHHHHHHHHcCCe-EEEEcCCCCCccc-ccchhhhhhhhcccCC
Q 026543 171 IDSQEILVFEDAPSGVLAAKNAGMS-VVMVPDPRLDSSY-HSNADQLLSSLLGFNP 224 (237)
Q Consensus 171 ~~~~~~~~igD~~~Di~~a~~~G~~-~i~v~~~~~~~~~-~~~~~~~~~~~~el~~ 224 (237)
++|++|+||||+.+|+++|+++|+. +++|..+...... .......++++.++..
T Consensus 164 ~~p~~~l~igDs~~di~aA~~aG~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (224)
T PRK14988 164 LKAERTLFIDDSEPILDAAAQFGIRYCLGVTNPDSGIAEKQYQRHPSLNDYRRLIP 219 (224)
T ss_pred CChHHEEEEcCCHHHHHHHHHcCCeEEEEEeCCCCCccchhccCCCcHHHHHHHhh
Confidence 9999999999999999999999998 5778776553221 2223334455555433
|
|
| >TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II | Back alignment and domain information |
|---|
Probab=99.97 E-value=7.9e-29 Score=184.11 Aligned_cols=181 Identities=19% Similarity=0.284 Sum_probs=132.4
Q ss_pred ccEEEEecCcccccchhhHHHHHHHHHHHcCCCCCH-------HH--HHHhcCC--C----hHHHHHHHHHHhCCCCCCC
Q 026543 10 ITHVIFDMDGLLLDTEKFYTEVQELILARYNKTFDW-------SL--KAKMMGK--K----AIEAAQVFVEETGISDKLS 74 (237)
Q Consensus 10 ~~~vifD~DGTL~~~~~~~~~~~~~~~~~~g~~~~~-------~~--~~~~~~~--~----~~~~~~~~~~~~~~~~~~~ 74 (237)
+|+|+||+||||+|+... ...+.+++...+..... .. .....|. + ....++.+...++.. ..
T Consensus 1 ik~viFD~dgTLiD~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~--~~ 77 (198)
T TIGR01428 1 IKALVFDVYGTLFDVHSV-VERFAELYGGRGEALSQLWRQKQLEYSWLRTLMGPYADFWDLTREALRYLLGRLGLE--DD 77 (198)
T ss_pred CcEEEEeCCCcCccHHHH-HHHHHHHhCchHHHHHHHHHHHHHHHHHHHHccCCCcCHHHHHHHHHHHHHHHcCCC--CC
Confidence 479999999999999864 34444433222211100 00 0111221 1 124455566667765 33
Q ss_pred HHHHHHHHHHHHHhhcCCCCCCccHHHHHHHHHhCCCCEEEEeCChhhHHHHHHhhhhhhhhhcceeeeCCCCCccCCCC
Q 026543 75 AEDFLVQREETLQTLFPTSELMPGASHLIRHLHAKGIPMCVATGSLARHFELKTQKHRELFSLMHHVVRGDDPEVKQGKP 154 (237)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~v~i~s~~~~~~~~~~~~~~~gl~~~f~~~~~~~~~~~~~~kp 154 (237)
.+......+ ......++||+.++|+.|+++|++++|+||+...... ..++..|+..+|+.+++++ +.+..||
T Consensus 78 ~~~~~~~~~-----~~~~~~~~~~~~~~L~~L~~~g~~~~i~Sn~~~~~~~-~~l~~~gl~~~fd~i~~s~--~~~~~KP 149 (198)
T TIGR01428 78 ESAADRLAE-----AYLRLPPHPDVPAGLRALKERGYRLAILSNGSPAMLK-SLVKHAGLDDPFDAVLSAD--AVRAYKP 149 (198)
T ss_pred HHHHHHHHH-----HHhcCCCCCCHHHHHHHHHHCCCeEEEEeCCCHHHHH-HHHHHCCChhhhheeEehh--hcCCCCC
Confidence 332222221 2234679999999999999999999999998776655 4577889999999999999 8889999
Q ss_pred CHHHHHHHHHHcCCCCCCCCcEEEEecCHHHHHHHHHcCCeEEEEcCCCC
Q 026543 155 SPDIFLAAAKRFEGGPIDSQEILVFEDAPSGVLAAKNAGMSVVMVPDPRL 204 (237)
Q Consensus 155 ~~~~~~~~l~~~~~~~~~~~~~~~igD~~~Di~~a~~~G~~~i~v~~~~~ 204 (237)
++..|..+++++| ++|++|++|||+.+|+++|+++|+.+|+|..+..
T Consensus 150 ~~~~~~~~~~~~~---~~p~~~~~vgD~~~Di~~A~~~G~~~i~v~r~~~ 196 (198)
T TIGR01428 150 APQVYQLALEALG---VPPDEVLFVASNPWDLGGAKKFGFKTAWVNRPGE 196 (198)
T ss_pred CHHHHHHHHHHhC---CChhhEEEEeCCHHHHHHHHHCCCcEEEecCCCC
Confidence 9999999999999 9999999999999999999999999999987543
|
Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related. |
| >PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.7e-29 Score=183.03 Aligned_cols=175 Identities=29% Similarity=0.459 Sum_probs=146.6
Q ss_pred EEEecCcccccchhhHHHHHHH-HHHHcCCCCCHHHHHHhcCCChHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHhhcC
Q 026543 13 VIFDMDGLLLDTEKFYTEVQEL-ILARYNKTFDWSLKAKMMGKKAIEAAQVFVEETGISDKLSAEDFLVQREETLQTLFP 91 (237)
Q Consensus 13 vifD~DGTL~~~~~~~~~~~~~-~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 91 (237)
|+||+||||+++...+.+.+.. +++.++...+.+...+..+.+..+.++.+..+++.. ...+.+.+.+. ....
T Consensus 1 iifD~dgtL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~--~~~~ 74 (176)
T PF13419_consen 1 IIFDLDGTLVDTDPAIFRALQRLALEEFGLEISAEELRELFGKSYEEALERLLERFGID----PEEIQELFREY--NLES 74 (176)
T ss_dssp EEEESBTTTEEHHHHHHHHHHHHHHHHTTHHHHHHHHHHHTTSHHHHHHHHHHHHHHHH----HHHHHHHHHHH--HHHG
T ss_pred cEEECCCCcEeCHHHHHHHHHHHHHHHhCCCCCHHHHHHHhCCCHHHHHHHhhhccchh----HHHHHHHhhhh--hhhh
Confidence 7999999999999988888887 477888776566677777777888888888776533 34444444443 1224
Q ss_pred CCCCCccHHHHHHHHHhCCCCEEEEeCChhhHHHHHHhhhhhhhhhcceeeeCCCCCccCCCCCHHHHHHHHHHcCCCCC
Q 026543 92 TSELMPGASHLIRHLHAKGIPMCVATGSLARHFELKTQKHRELFSLMHHVVRGDDPEVKQGKPSPDIFLAAAKRFEGGPI 171 (237)
Q Consensus 92 ~~~~~~~~~~~l~~l~~~g~~v~i~s~~~~~~~~~~~~~~~gl~~~f~~~~~~~~~~~~~~kp~~~~~~~~l~~~~~~~~ 171 (237)
...++||+.++|+.|+++|++++++||+....+. ..++..|+..+|+.+++++ +.+..||++..|+.++++++ +
T Consensus 75 ~~~~~~~~~~~L~~l~~~~~~~~i~Sn~~~~~~~-~~l~~~~~~~~f~~i~~~~--~~~~~Kp~~~~~~~~~~~~~---~ 148 (176)
T PF13419_consen 75 KLQPYPGVRELLERLKAKGIPLVIVSNGSRERIE-RVLERLGLDDYFDEIISSD--DVGSRKPDPDAYRRALEKLG---I 148 (176)
T ss_dssp GEEESTTHHHHHHHHHHTTSEEEEEESSEHHHHH-HHHHHTTHGGGCSEEEEGG--GSSSSTTSHHHHHHHHHHHT---S
T ss_pred ccchhhhhhhhhhhcccccceeEEeecCCccccc-ccccccccccccccccccc--hhhhhhhHHHHHHHHHHHcC---C
Confidence 5789999999999999999999999998776555 4678889999999999998 88889999999999999999 9
Q ss_pred CCCcEEEEecCHHHHHHHHHcCCeEEEE
Q 026543 172 DSQEILVFEDAPSGVLAAKNAGMSVVMV 199 (237)
Q Consensus 172 ~~~~~~~igD~~~Di~~a~~~G~~~i~v 199 (237)
+|++|++|||+..|+++|+++|+.+|+|
T Consensus 149 ~p~~~~~vgD~~~d~~~A~~~G~~~i~v 176 (176)
T PF13419_consen 149 PPEEILFVGDSPSDVEAAKEAGIKTIWV 176 (176)
T ss_dssp SGGGEEEEESSHHHHHHHHHTTSEEEEE
T ss_pred CcceEEEEeCCHHHHHHHHHcCCeEEeC
Confidence 9999999999999999999999999986
|
... |
| >PLN02919 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.2e-28 Score=219.79 Aligned_cols=209 Identities=24% Similarity=0.306 Sum_probs=169.7
Q ss_pred CCccEEEEecCcccccchhhHHHHHHHHHHHcCCCCCHHHHHHhcCCChHHHHHHHHHHhCCCCCCCHHHHHH-HHHHHH
Q 026543 8 KPITHVIFDMDGLLLDTEKFYTEVQELILARYNKTFDWSLKAKMMGKKAIEAAQVFVEETGISDKLSAEDFLV-QREETL 86 (237)
Q Consensus 8 ~~~~~vifD~DGTL~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 86 (237)
+++++|+|||||||+|+...+.+++..+++++|++.+.+.+....+.+..+.++.+...+++.. ...++..+ .++.+.
T Consensus 73 ~~ikaVIFDlDGTLiDS~~~~~~a~~~~~~~~G~~it~e~~~~~~G~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~ 151 (1057)
T PLN02919 73 GKVSAVLFDMDGVLCNSEEPSRRAAVDVFAEMGVEVTVEDFVPFMGTGEANFLGGVASVKGVKG-FDPDAAKKRFFEIYL 151 (1057)
T ss_pred CCCCEEEECCCCCeEeChHHHHHHHHHHHHHcCCCCCHHHHHHHhCCCHHHHHHHHHHhcCCCC-CCHHHHHHHHHHHHH
Confidence 4689999999999999999999999999999999887777778888887777777666665532 23333322 233222
Q ss_pred HhhcC--CCCCCccHHHHHHHHHhCCCCEEEEeCChhhHHHHHHhhhhhhh-hhcceeeeCCCCCccCCCCCHHHHHHHH
Q 026543 87 QTLFP--TSELMPGASHLIRHLHAKGIPMCVATGSLARHFELKTQKHRELF-SLMHHVVRGDDPEVKQGKPSPDIFLAAA 163 (237)
Q Consensus 87 ~~~~~--~~~~~~~~~~~l~~l~~~g~~v~i~s~~~~~~~~~~~~~~~gl~-~~f~~~~~~~~~~~~~~kp~~~~~~~~l 163 (237)
..+.. ...++||+.++|+.|+++|++++|+||.....+. ..++..|+. .+|+.+++++ +....||+|+.|..++
T Consensus 152 ~~~~~~~~~~~~pG~~elL~~Lk~~G~~l~IvSn~~~~~~~-~~L~~~gl~~~~Fd~iv~~~--~~~~~KP~Pe~~~~a~ 228 (1057)
T PLN02919 152 EKYAKPNSGIGFPGALELITQCKNKGLKVAVASSADRIKVD-ANLAAAGLPLSMFDAIVSAD--AFENLKPAPDIFLAAA 228 (1057)
T ss_pred HHhhhcccCccCccHHHHHHHHHhCCCeEEEEeCCcHHHHH-HHHHHcCCChhHCCEEEECc--ccccCCCCHHHHHHHH
Confidence 22211 2347999999999999999999999997766555 457778885 7899999999 8888999999999999
Q ss_pred HHcCCCCCCCCcEEEEecCHHHHHHHHHcCCeEEEEcCCCCC-cccccchhhhhhhhcccC
Q 026543 164 KRFEGGPIDSQEILVFEDAPSGVLAAKNAGMSVVMVPDPRLD-SSYHSNADQLLSSLLGFN 223 (237)
Q Consensus 164 ~~~~~~~~~~~~~~~igD~~~Di~~a~~~G~~~i~v~~~~~~-~~~~~~~~~~~~~~~el~ 223 (237)
++++ ++|++|++|||+..|+++|+++||.+|+|.++... ++...+++++++++.|+.
T Consensus 229 ~~lg---v~p~e~v~IgDs~~Di~AA~~aGm~~I~v~~~~~~~~L~~~~a~~vi~~l~el~ 286 (1057)
T PLN02919 229 KILG---VPTSECVVIEDALAGVQAARAAGMRCIAVTTTLSEEILKDAGPSLIRKDIGNIS 286 (1057)
T ss_pred HHcC---cCcccEEEEcCCHHHHHHHHHcCCEEEEECCCCCHHHHhhCCCCEEECChHHCC
Confidence 9999 99999999999999999999999999999987542 334567889999999985
|
|
| >TIGR02252 DREG-2 REG-2-like, HAD superfamily (subfamily IA) hydrolase | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.9e-28 Score=182.79 Aligned_cols=178 Identities=23% Similarity=0.271 Sum_probs=136.8
Q ss_pred cEEEEecCcccccchhhHHHHHHHHHHHcCCCCCHHHHHHh------------------cCCChHHH----HHHHHHHhC
Q 026543 11 THVIFDMDGLLLDTEKFYTEVQELILARYNKTFDWSLKAKM------------------MGKKAIEA----AQVFVEETG 68 (237)
Q Consensus 11 ~~vifD~DGTL~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~------------------~~~~~~~~----~~~~~~~~~ 68 (237)
|+|+||+||||+|+...+..++.++++++|...+....... .|.+..+. .+..+...+
T Consensus 1 k~viFDlDGTL~d~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 80 (203)
T TIGR02252 1 KLITFDAVGTLLALKEPVGEVYCEIARKYGVEVSPDELEQAFRRAFKAMSEAFPNFGFSSGLTPQQWWQKLVRDTFGRAG 80 (203)
T ss_pred CeEEEecCCceeeeCCCHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhhCCCCCCCCCCCHHHHHHHHHHHHHHhcC
Confidence 58999999999999999999999999999997654332110 13343322 233333333
Q ss_pred CCCCCCHHHHHHHHHHHHHhhc--CCCCCCccHHHHHHHHHhCCCCEEEEeCChhhHHHHHHhhhhhhhhhcceeeeCCC
Q 026543 69 ISDKLSAEDFLVQREETLQTLF--PTSELMPGASHLIRHLHAKGIPMCVATGSLARHFELKTQKHRELFSLMHHVVRGDD 146 (237)
Q Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~l~~~g~~v~i~s~~~~~~~~~~~~~~~gl~~~f~~~~~~~~ 146 (237)
.. ..+.+......++.... ....++||+.++|+.|+++|++++|+||+... . ...++..|+..+|+.+++++
T Consensus 81 ~~---~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~-~-~~~l~~~~l~~~fd~i~~s~- 154 (203)
T TIGR02252 81 VP---DPESFEKIFEELYSYFATPEPWQVYPDAIKLLKDLRERGLILGVISNFDSR-L-RGLLEALGLLEYFDFVVTSY- 154 (203)
T ss_pred CC---CchhHHHHHHHHHHHhcCCCcceeCcCHHHHHHHHHHCCCEEEEEeCCchh-H-HHHHHHCCcHHhcceEEeec-
Confidence 22 22334444444443332 23578999999999999999999999997653 3 34578889999999999998
Q ss_pred CCccCCCCCHHHHHHHHHHcCCCCCCCCcEEEEecCH-HHHHHHHHcCCeEEE
Q 026543 147 PEVKQGKPSPDIFLAAAKRFEGGPIDSQEILVFEDAP-SGVLAAKNAGMSVVM 198 (237)
Q Consensus 147 ~~~~~~kp~~~~~~~~l~~~~~~~~~~~~~~~igD~~-~Di~~a~~~G~~~i~ 198 (237)
+.+..||+|..|..+++++| ++|++|++|||+. +|+++|+++|+.+|+
T Consensus 155 -~~~~~KP~~~~~~~~~~~~~---~~~~~~~~IgD~~~~Di~~A~~aG~~~i~ 203 (203)
T TIGR02252 155 -EVGAEKPDPKIFQEALERAG---ISPEEALHIGDSLRNDYQGARAAGWRALL 203 (203)
T ss_pred -ccCCCCCCHHHHHHHHHHcC---CChhHEEEECCCchHHHHHHHHcCCeeeC
Confidence 88889999999999999999 9999999999998 899999999999874
|
Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes. |
| >TIGR01509 HAD-SF-IA-v3 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED | Back alignment and domain information |
|---|
Probab=99.95 E-value=7.8e-27 Score=171.36 Aligned_cols=175 Identities=30% Similarity=0.462 Sum_probs=126.4
Q ss_pred EEEEecCcccccchhhHHHHHHHHHHHcCCCCCHHHHHHhcCCChHHHHHHHHHHhCCCCCCCHHHHHHH------HHHH
Q 026543 12 HVIFDMDGLLLDTEKFYTEVQELILARYNKTFDWSLKAKMMGKKAIEAAQVFVEETGISDKLSAEDFLVQ------REET 85 (237)
Q Consensus 12 ~vifD~DGTL~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~ 85 (237)
+|+||+||||+++.+.+..... ..+............. .......+.+...++.. .....+... ....
T Consensus 1 ~vlFDlDgtLv~~~~~~~~~~~---~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~ 74 (183)
T TIGR01509 1 AILFDLDGVLVDTSSAIEKLVN---REEFPLVPDELGVSAV-GKLELALRRWKEKYGRT--MSAEDFYLLYENADIKQLF 74 (183)
T ss_pred CeeeccCCceechHHHHHHHHH---HHhCCCCcHHHHHHHH-HHHHHHhhccccccCCC--CCcHHHHHHHhHHHHHHHH
Confidence 4899999999999886555211 2222222222222221 22233333444434444 344433322 3344
Q ss_pred HHhhcCC--CCCCccHHHHHHHHHhCCCCEEEEeCChhhHHHHHHhhhhhhhhhcceeeeCCCCCccCCCCCHHHHHHHH
Q 026543 86 LQTLFPT--SELMPGASHLIRHLHAKGIPMCVATGSLARHFELKTQKHRELFSLMHHVVRGDDPEVKQGKPSPDIFLAAA 163 (237)
Q Consensus 86 ~~~~~~~--~~~~~~~~~~l~~l~~~g~~v~i~s~~~~~~~~~~~~~~~gl~~~f~~~~~~~~~~~~~~kp~~~~~~~~l 163 (237)
+...... .+++||+.++|+.|+++|++++++||+.... . ....++|+..+|+.+++++ +.+..||+|..|..++
T Consensus 75 ~~~~~~~~~~~~~~g~~~~l~~l~~~g~~~~i~Tn~~~~~-~-~~~~~~~l~~~f~~i~~~~--~~~~~KP~~~~~~~~~ 150 (183)
T TIGR01509 75 YDAILDEEKLKPLPGVEPLLEALRARGKKLALLTNSPRDH-A-VLVQELGLRDLFDVVIFSG--DVGRGKPDPDIYLLAL 150 (183)
T ss_pred HHHHHhccCCccCcCHHHHHHHHHHCCCeEEEEeCCchHH-H-HHHHhcCCHHHCCEEEEcC--CCCCCCCCHHHHHHHH
Confidence 4443333 6899999999999999999999999977765 3 4455589999999999998 7889999999999999
Q ss_pred HHcCCCCCCCCcEEEEecCHHHHHHHHHcCCeEEEE
Q 026543 164 KRFEGGPIDSQEILVFEDAPSGVLAAKNAGMSVVMV 199 (237)
Q Consensus 164 ~~~~~~~~~~~~~~~igD~~~Di~~a~~~G~~~i~v 199 (237)
++++ ++|++|++|||+..|+++|+++|+.+|+|
T Consensus 151 ~~~~---~~~~~~~~vgD~~~di~aA~~~G~~~i~v 183 (183)
T TIGR01509 151 KKLG---LKPEECLFVDDSPAGIEAAKAAGMHTVLV 183 (183)
T ss_pred HHcC---CCcceEEEEcCCHHHHHHHHHcCCEEEeC
Confidence 9999 99999999999999999999999999875
|
HAD subfamilies caused by an overly broad single model. |
| >TIGR02247 HAD-1A3-hyp Epoxide hydrolase N-terminal domain-like phosphatase | Back alignment and domain information |
|---|
Probab=99.95 E-value=5.9e-27 Score=175.76 Aligned_cols=181 Identities=23% Similarity=0.303 Sum_probs=125.4
Q ss_pred ccEEEEecCcccccchhhHHHHHHHHHHHcCCCCCHHHHHHhcCCChHHHHHHHHHHhCCCCCCCHHHHHHHHHHHH---
Q 026543 10 ITHVIFDMDGLLLDTEKFYTEVQELILARYNKTFDWSLKAKMMGKKAIEAAQVFVEETGISDKLSAEDFLVQREETL--- 86 (237)
Q Consensus 10 ~~~vifD~DGTL~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 86 (237)
+++|+||+||||+++.. ....|...+...|.+ ..+....+.+.+.....+.+. .+ ..+.+++...+.+.+
T Consensus 2 ik~viFDldGtL~d~~~-~~~~~~~~~~~~g~~-~~~~~~~~~~~~~~~~~~~~~--~g---~~~~~~~~~~~~~~~~~~ 74 (211)
T TIGR02247 2 IKAVIFDFGGVLLPSPG-VMRRWETERGLPGLK-DFIVTVNITGPDFNPWARTFE--RG---ELTAEAFDGLFRHEYGLR 74 (211)
T ss_pred ceEEEEecCCceecCHH-HHHHHHHHcCCCCCc-cHHHHHHhcCCCCChHHHHHH--cC---CCCHHHHHHHHHHHhccc
Confidence 58999999999999976 556666554444543 222233333333222222111 01 022222222221111
Q ss_pred -----------Hhh-cCCCCCCccHHHHHHHHHhCCCCEEEEeCChhhHH-HHHHhhhhhhhhhcceeeeCCCCCccCCC
Q 026543 87 -----------QTL-FPTSELMPGASHLIRHLHAKGIPMCVATGSLARHF-ELKTQKHRELFSLMHHVVRGDDPEVKQGK 153 (237)
Q Consensus 87 -----------~~~-~~~~~~~~~~~~~l~~l~~~g~~v~i~s~~~~~~~-~~~~~~~~gl~~~f~~~~~~~~~~~~~~k 153 (237)
... .....++||+.++|+.|+++|++++|+||+..... ........++..+|+.+++++ +.+..|
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~l~~~fd~v~~s~--~~~~~K 152 (211)
T TIGR02247 75 LGHDVRIAPVFPLLYGENTKLRPSMMAAIKTLRAKGFKTACITNNFPTDHSAEEALLPGDIMALFDAVVESC--LEGLRK 152 (211)
T ss_pred cCCCcCchhhHHHHhccccccChhHHHHHHHHHHCCCeEEEEeCCCCccchhhhHhhhhhhHhhCCEEEEee--ecCCCC
Confidence 111 12477899999999999999999999999754331 112233457889999999988 788899
Q ss_pred CCHHHHHHHHHHcCCCCCCCCcEEEEecCHHHHHHHHHcCCeEEEEcCC
Q 026543 154 PSPDIFLAAAKRFEGGPIDSQEILVFEDAPSGVLAAKNAGMSVVMVPDP 202 (237)
Q Consensus 154 p~~~~~~~~l~~~~~~~~~~~~~~~igD~~~Di~~a~~~G~~~i~v~~~ 202 (237)
|+|..|..+++++| ++|++|+||||+..|+.+|+++|+.+|++.++
T Consensus 153 P~p~~~~~~~~~~g---~~~~~~l~i~D~~~di~aA~~aG~~~i~v~~~ 198 (211)
T TIGR02247 153 PDPRIYQLMLERLG---VAPEECVFLDDLGSNLKPAAALGITTIKVSDE 198 (211)
T ss_pred CCHHHHHHHHHHcC---CCHHHeEEEcCCHHHHHHHHHcCCEEEEECCH
Confidence 99999999999999 99999999999999999999999999999764
|
These appear to be members of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases by general homology and the conservation of all of the recognized catalytic motifs (although the first motif is unusual in the replacement of the more common aspartate with glycine...). The variable domain is found in between motifs 1 and 2, indicating membership in subfamily I and phylogeny and prediction of the alpha helical nature of the variable domain (by PSI-PRED) indicate membership in subfamily IA. |
| >TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548 | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.5e-26 Score=170.39 Aligned_cols=174 Identities=17% Similarity=0.198 Sum_probs=131.7
Q ss_pred EEEEecCcccccchhhHHHHHHHHHHHcC-CCCCHHHHHHhcCCChH--------HHHHHHHHHhCC---CCCCCHHHHH
Q 026543 12 HVIFDMDGLLLDTEKFYTEVQELILARYN-KTFDWSLKAKMMGKKAI--------EAAQVFVEETGI---SDKLSAEDFL 79 (237)
Q Consensus 12 ~vifD~DGTL~~~~~~~~~~~~~~~~~~g-~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~---~~~~~~~~~~ 79 (237)
+|+|||||||+|+...+..++..+++++| ...+.+.+....|.+.. ..+..++..... ......+.+.
T Consensus 2 ~viFD~DGTLiDs~~~~~~a~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (197)
T TIGR01548 2 ALVLDMDGVMADVSQSYRRAIIDTVEHFGGVSVTHADIDHTKLAGNANNDWQLTHRLVVDGLNSASSERVRDAPTLEAVT 81 (197)
T ss_pred ceEEecCceEEechHHHHHHHHHHHHHHcCCCCCHHHHHHHHHccCccCchHHHHHHHHHhhhcccchhccCCccHHHHH
Confidence 68999999999999999999999999997 56666666666654321 111122221110 1124456666
Q ss_pred HHHHHHHHhhc----------CCCCCCccHHHHHHHHHhCCCCEEEEeCChhhHHHHHHhhhhhhhhhcceeeeCCCCCc
Q 026543 80 VQREETLQTLF----------PTSELMPGASHLIRHLHAKGIPMCVATGSLARHFELKTQKHRELFSLMHHVVRGDDPEV 149 (237)
Q Consensus 80 ~~~~~~~~~~~----------~~~~~~~~~~~~l~~l~~~g~~v~i~s~~~~~~~~~~~~~~~gl~~~f~~~~~~~~~~~ 149 (237)
..++..+.... ....+.++..++|+.|+++|++++|+||+...... ..++..|+..+|+.+++++ +.
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~l~~~g~~~~i~T~~~~~~~~-~~l~~~gl~~~f~~~~~~~--~~ 158 (197)
T TIGR01548 82 AQFQALYQGVGYYRDLATLGLIEDETLLTPKGLLRELHRAPKGMAVVTGRPRKDAA-KFLTTHGLEILFPVQIWME--DC 158 (197)
T ss_pred HHHHHHHcCCcccccccchhhhccccccCHHHHHHHHHHcCCcEEEECCCCHHHHH-HHHHHcCchhhCCEEEeec--CC
Confidence 66666654321 12345566799999999999999999997666555 5688899999999999998 66
Q ss_pred cCCCCCHHHHHHHHHHcCCCCCCCCcEEEEecCHHHHHHHHHc
Q 026543 150 KQGKPSPDIFLAAAKRFEGGPIDSQEILVFEDAPSGVLAAKNA 192 (237)
Q Consensus 150 ~~~kp~~~~~~~~l~~~~~~~~~~~~~~~igD~~~Di~~a~~~ 192 (237)
.. ||+|..+..++++++ +++++|++|||+.+|+++|+++
T Consensus 159 ~~-KP~p~~~~~~~~~~~---~~~~~~i~vGD~~~Di~aA~~a 197 (197)
T TIGR01548 159 PP-KPNPEPLILAAKALG---VEACHAAMVGDTVDDIITGRKA 197 (197)
T ss_pred CC-CcCHHHHHHHHHHhC---cCcccEEEEeCCHHHHHHHHhC
Confidence 66 999999999999999 9999999999999999999875
|
All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's. |
| >PRK09456 ?-D-glucose-1-phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.95 E-value=6.8e-26 Score=168.30 Aligned_cols=178 Identities=17% Similarity=0.240 Sum_probs=130.1
Q ss_pred cEEEEecCcccccchhhHH-HHHHHHHHHcCCCC---------CHHHHHHhc-CCChHHHHHHHHHHhCCCCCCCHHHHH
Q 026543 11 THVIFDMDGLLLDTEKFYT-EVQELILARYNKTF---------DWSLKAKMM-GKKAIEAAQVFVEETGISDKLSAEDFL 79 (237)
Q Consensus 11 ~~vifD~DGTL~~~~~~~~-~~~~~~~~~~g~~~---------~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (237)
.+|+||+||||++.+.... ..+.. ..+... ......... +.+..+..+.+.+.++.. ...+.+.
T Consensus 1 ~~viFDldgvL~d~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~--~~~~~~~ 75 (199)
T PRK09456 1 MLYIFDLGNVIVDIDFNRVLGVWSD---LSRVPLATLKKRFTMGEAFHQHERGEISDEAFAEALCHEMALS--LSYEQFA 75 (199)
T ss_pred CEEEEeCCCccccCcHHHHHHHHHH---hcCCCHHHHHHHHhcCcHHHHHhcCCCCHHHHHHHHHHHhCCC--CCHHHHH
Confidence 4799999999999864221 11111 111110 000111112 245666677888888876 5545544
Q ss_pred HHHHHHHHhhcCCCCCCccHHHHHHHHHhCCCCEEEEeCChhhHHHHHHhhhhhhhhhcceeeeCCCCCccCCCCCHHHH
Q 026543 80 VQREETLQTLFPTSELMPGASHLIRHLHAKGIPMCVATGSLARHFELKTQKHRELFSLMHHVVRGDDPEVKQGKPSPDIF 159 (237)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~v~i~s~~~~~~~~~~~~~~~gl~~~f~~~~~~~~~~~~~~kp~~~~~ 159 (237)
..+...+ ..++||+.++|+.|+++|++++|+||+.............++..+|+.+++++ +.+..||+|+.|
T Consensus 76 ~~~~~~~------~~~~~g~~e~L~~l~~~g~~~~i~Sn~~~~~~~~~~~~~~~l~~~fd~v~~s~--~~~~~KP~p~~~ 147 (199)
T PRK09456 76 HGWQAVF------VALRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEEYPEVRAAADHIYLSQ--DLGMRKPEARIY 147 (199)
T ss_pred HHHHHHH------hccCHHHHHHHHHHHhCCCcEEEEcCCchhhHHHHHhhchhHHHhcCEEEEec--ccCCCCCCHHHH
Confidence 4443322 35899999999999999999999999776544432223357888999999999 889999999999
Q ss_pred HHHHHHcCCCCCCCCcEEEEecCHHHHHHHHHcCCeEEEEcCCCC
Q 026543 160 LAAAKRFEGGPIDSQEILVFEDAPSGVLAAKNAGMSVVMVPDPRL 204 (237)
Q Consensus 160 ~~~l~~~~~~~~~~~~~~~igD~~~Di~~a~~~G~~~i~v~~~~~ 204 (237)
..+++++| ++|++|+||||+..|+++|+++|+.++++..+..
T Consensus 148 ~~~~~~~~---~~p~~~l~vgD~~~di~aA~~aG~~~i~~~~~~~ 189 (199)
T PRK09456 148 QHVLQAEG---FSAADAVFFDDNADNIEAANALGITSILVTDKQT 189 (199)
T ss_pred HHHHHHcC---CChhHeEEeCCCHHHHHHHHHcCCEEEEecCCcc
Confidence 99999999 9999999999999999999999999999987544
|
|
| >COG1011 Predicted hydrolase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.4e-26 Score=175.97 Aligned_cols=128 Identities=22% Similarity=0.269 Sum_probs=109.3
Q ss_pred CCCCCccHHHHHHHHHhCCCCEEEEeCChhhHHHHHHhhhhhhhhhcceeeeCCCCCccCCCCCHHHHHHHHHHcCCCCC
Q 026543 92 TSELMPGASHLIRHLHAKGIPMCVATGSLARHFELKTQKHRELFSLMHHVVRGDDPEVKQGKPSPDIFLAAAKRFEGGPI 171 (237)
Q Consensus 92 ~~~~~~~~~~~l~~l~~~g~~v~i~s~~~~~~~~~~~~~~~gl~~~f~~~~~~~~~~~~~~kp~~~~~~~~l~~~~~~~~ 171 (237)
..++++++.++|+.++++ ++++++||+...... ..++.+|+.++||.++.++ +.+..||++.+|..+++++| +
T Consensus 97 ~~~~~~~~~~~L~~l~~~-~~l~ilTNg~~~~~~-~~l~~~gl~~~Fd~v~~s~--~~g~~KP~~~~f~~~~~~~g---~ 169 (229)
T COG1011 97 LLPDYPEALEALKELGKK-YKLGILTNGARPHQE-RKLRQLGLLDYFDAVFISE--DVGVAKPDPEIFEYALEKLG---V 169 (229)
T ss_pred hCccChhHHHHHHHHHhh-ccEEEEeCCChHHHH-HHHHHcCChhhhheEEEec--ccccCCCCcHHHHHHHHHcC---C
Confidence 478999999999999999 999999997665555 4577778999999999999 89999999999999999999 9
Q ss_pred CCCcEEEEecCH-HHHHHHHHcCCeEEEEcCCCCCc-ccccchhhhhhhhcccCCCC
Q 026543 172 DSQEILVFEDAP-SGVLAAKNAGMSVVMVPDPRLDS-SYHSNADQLLSSLLGFNPKD 226 (237)
Q Consensus 172 ~~~~~~~igD~~-~Di~~a~~~G~~~i~v~~~~~~~-~~~~~~~~~~~~~~el~~~l 226 (237)
+|++++||||+. ||+.+|+++||.++++..+.... .....++..+.++.++...+
T Consensus 170 ~p~~~l~VgD~~~~di~gA~~~G~~~vwi~~~~~~~~~~~~~~~~~i~~l~~l~~~~ 226 (229)
T COG1011 170 PPEEALFVGDSLENDILGARALGMKTVWINRGGKPLPDALEAPDYEISSLAELLDLL 226 (229)
T ss_pred CcceEEEECCChhhhhHHHHhcCcEEEEECCCCCCCCCCccCCceEEcCHHHHHHHH
Confidence 999999999999 88899999999999998766522 11256777788887775443
|
|
| >TIGR01993 Pyr-5-nucltdase pyrimidine 5'-nucleotidase | Back alignment and domain information |
|---|
Probab=99.94 E-value=6.2e-26 Score=166.60 Aligned_cols=170 Identities=18% Similarity=0.202 Sum_probs=123.6
Q ss_pred cEEEEecCcccccchhhHHHHHHHHHH-----HcCCCCCHHH-HH----HhcCCChHHHHHHHHHHhCCCCCCCHHHHHH
Q 026543 11 THVIFDMDGLLLDTEKFYTEVQELILA-----RYNKTFDWSL-KA----KMMGKKAIEAAQVFVEETGISDKLSAEDFLV 80 (237)
Q Consensus 11 ~~vifD~DGTL~~~~~~~~~~~~~~~~-----~~g~~~~~~~-~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (237)
++|+||+||||+|+...+..++.+.+. ++|++..... .. +..|.+.. .+....+ ...+.+..
T Consensus 1 ~~viFDlDGTL~ds~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~~~~~~g~~~~----~~~~~~~----~~~~~~~~ 72 (184)
T TIGR01993 1 DVWFFDLDNTLYPHSAGIFLQIDRNITEFVAARLKLSEEEARVLRKDYYREYGTTLA----GLMILHE----IDADEYLR 72 (184)
T ss_pred CeEEEeCCCCCCCCcccHHHHHHHHHHHHHHHHcCcCHHHHHHHHHHHHHHHchHHH----HHHHhhC----CCHHHHHH
Confidence 479999999999998888888776654 4565332211 11 11222222 2222222 23343333
Q ss_pred HHHHHHHhhcCCCCCCccHHHHHHHHHhCCCCEEEEeCChhhHHHHHHhhhhhhhhhcceeeeCCCCCccC----CCCCH
Q 026543 81 QREETLQTLFPTSELMPGASHLIRHLHAKGIPMCVATGSLARHFELKTQKHRELFSLMHHVVRGDDPEVKQ----GKPSP 156 (237)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~v~i~s~~~~~~~~~~~~~~~gl~~~f~~~~~~~~~~~~~----~kp~~ 156 (237)
.+.... .....++++|+.++|+.|+ .+++|+||+...... ..++..|+..+|+.+++++ +.+. .||+|
T Consensus 73 ~~~~~~--~~~~~~~~~g~~~~L~~L~---~~~~i~Tn~~~~~~~-~~l~~~gl~~~fd~i~~~~--~~~~~~~~~KP~p 144 (184)
T TIGR01993 73 YVHGRL--PYEKLKPDPELRNLLLRLP---GRKIIFTNGDRAHAR-RALNRLGIEDCFDGIFCFD--TANPDYLLPKPSP 144 (184)
T ss_pred HHhccC--CHHhCCCCHHHHHHHHhCC---CCEEEEeCCCHHHHH-HHHHHcCcHhhhCeEEEee--cccCccCCCCCCH
Confidence 333211 1124678999999999997 579999997776555 5678889999999999998 6665 59999
Q ss_pred HHHHHHHHHcCCCCCCCCcEEEEecCHHHHHHHHHcCCeEEEE
Q 026543 157 DIFLAAAKRFEGGPIDSQEILVFEDAPSGVLAAKNAGMSVVMV 199 (237)
Q Consensus 157 ~~~~~~l~~~~~~~~~~~~~~~igD~~~Di~~a~~~G~~~i~v 199 (237)
+.|..+++++| ++|++++||||+..|+++|+++|+++|+|
T Consensus 145 ~~~~~~~~~~~---~~~~~~l~vgD~~~di~aA~~~G~~~i~v 184 (184)
T TIGR01993 145 QAYEKALREAG---VDPERAIFFDDSARNIAAAKALGMKTVLV 184 (184)
T ss_pred HHHHHHHHHhC---CCccceEEEeCCHHHHHHHHHcCCEEeeC
Confidence 99999999999 99999999999999999999999999875
|
These enzymes are members of the haloacid dehalogenase (HAD) superfamily of hydrolases, specifically the IA subfamily (variant 3, TIGR01509). |
| >PHA02597 30 | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.4e-25 Score=165.28 Aligned_cols=188 Identities=14% Similarity=0.141 Sum_probs=130.5
Q ss_pred ccEEEEecCcccccchhhHHHHHHHHHHHcCCCCCHHHHHHhcCCChHHHHHHHHHHhCCCCCCCHHHHHHHHHHHH-Hh
Q 026543 10 ITHVIFDMDGLLLDTEKFYTEVQELILARYNKTFDWSLKAKMMGKKAIEAAQVFVEETGISDKLSAEDFLVQREETL-QT 88 (237)
Q Consensus 10 ~~~vifD~DGTL~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 88 (237)
+|+|+|||||||+|+. .++..+++++|++. +.+....+.+...... ..++. ..+...+.++.+. ..
T Consensus 2 ~k~viFDlDGTLiD~~----~~~~~~~~~~g~~~--~~~~~~~g~~~~~~~~---~~~~~----~~~~~~~~~~~~~~~~ 68 (197)
T PHA02597 2 KPTILTDVDGVLLSWQ----SGLPYFAQKYNIPT--DHILKMIQDERFRDPG---ELFGC----DQELAKKLIEKYNNSD 68 (197)
T ss_pred CcEEEEecCCceEchh----hccHHHHHhcCCCH--HHHHHHHhHhhhcCHH---HHhcc----cHHHHHHHhhhhhHHH
Confidence 6899999999999954 35667778888743 3434443332222221 12221 2233334444433 22
Q ss_pred hcCCCCCCccHHHHHHHHHhCCCCEEEEeCChhhHHHHHHhhhhhhhh----hcceeeeCCCCCccCCCCCHHHHHHHHH
Q 026543 89 LFPTSELMPGASHLIRHLHAKGIPMCVATGSLARHFELKTQKHRELFS----LMHHVVRGDDPEVKQGKPSPDIFLAAAK 164 (237)
Q Consensus 89 ~~~~~~~~~~~~~~l~~l~~~g~~v~i~s~~~~~~~~~~~~~~~gl~~----~f~~~~~~~~~~~~~~kp~~~~~~~~l~ 164 (237)
......++||+.++|+.|++. ++++++||..... .....+.+++.. +|+.+++++ . .||+|+.+..+++
T Consensus 69 ~~~~~~~~pG~~e~L~~L~~~-~~~~i~Tn~~~~~-~~~~~~~~~l~~~f~~~f~~i~~~~--~---~~~kp~~~~~a~~ 141 (197)
T PHA02597 69 FIRYLSAYDDALDVINKLKED-YDFVAVTALGDSI-DALLNRQFNLNALFPGAFSEVLMCG--H---DESKEKLFIKAKE 141 (197)
T ss_pred HHHhccCCCCHHHHHHHHHhc-CCEEEEeCCccch-hHHHHhhCCHHHhCCCcccEEEEec--c---CcccHHHHHHHHH
Confidence 334577999999999999987 5788888855443 223455556665 456677666 3 3677899999999
Q ss_pred HcCCCCCCCCcEEEEecCHHHHHHHHHc--CCeEEEEcCCCCCcccccchhhhhhhhcccCC
Q 026543 165 RFEGGPIDSQEILVFEDAPSGVLAAKNA--GMSVVMVPDPRLDSSYHSNADQLLSSLLGFNP 224 (237)
Q Consensus 165 ~~~~~~~~~~~~~~igD~~~Di~~a~~~--G~~~i~v~~~~~~~~~~~~~~~~~~~~~el~~ 224 (237)
++| |++++||||+.+|+.+|+++ |++++++.++.. .....+++.+.|+.|+..
T Consensus 142 ~~~-----~~~~v~vgDs~~di~aA~~a~~Gi~~i~~~~~~~--~~~~~~~~~~~~~~~~~~ 196 (197)
T PHA02597 142 KYG-----DRVVCFVDDLAHNLDAAHEALSQLPVIHMLRGER--DHIPKLAHRVKSWNDIEN 196 (197)
T ss_pred HhC-----CCcEEEeCCCHHHHHHHHHHHcCCcEEEecchhh--ccccchhhhhccHHHHhc
Confidence 997 68899999999999999999 999999988865 334567799999998753
|
2 hypothetical protein; Provisional |
| >KOG3085 consensus Predicted hydrolase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.3e-24 Score=160.64 Aligned_cols=193 Identities=23% Similarity=0.217 Sum_probs=141.8
Q ss_pred CCCCCccEEEEecCcccccchhhHHHHHHHHHHHcCCCCCHHHHHH------------------hcC-CChHHHHHHH-H
Q 026543 5 SSKKPITHVIFDMDGLLLDTEKFYTEVQELILARYNKTFDWSLKAK------------------MMG-KKAIEAAQVF-V 64 (237)
Q Consensus 5 ~~~~~~~~vifD~DGTL~~~~~~~~~~~~~~~~~~g~~~~~~~~~~------------------~~~-~~~~~~~~~~-~ 64 (237)
+..+++|+|+||++|||+...+.....+..+.+.+|++........ +.+ .+...+...+ .
T Consensus 2 ~~~~~iravtfD~~~tLl~~~~~~~~~y~~i~~~~gl~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~l~~~~ww~~lv~ 81 (237)
T KOG3085|consen 2 AELMRIRAVTFDAGGTLLATLPPVMEVYCEIAEAYGLEYDDSLIETIFRKDFKKMSEKGPFFGLYSGELTLSQWWPKLVE 81 (237)
T ss_pred CcccceEEEEEeCCCceeecCCccHHHHHHHHHHhCCCCCHHHHhHhhhHHHHhhcccCCcccccCCcccHHHHHHHHHH
Confidence 3456789999999999999888889999999999999744333221 111 1334444422 3
Q ss_pred HHhCCCCCCCHHHHHH-HHHHHHHhhc-CCCCCCccHHHHHHHHHhCCCCEEEEeCChhhHHHHHHhhhhhhhhhcceee
Q 026543 65 EETGISDKLSAEDFLV-QREETLQTLF-PTSELMPGASHLIRHLHAKGIPMCVATGSLARHFELKTQKHRELFSLMHHVV 142 (237)
Q Consensus 65 ~~~~~~~~~~~~~~~~-~~~~~~~~~~-~~~~~~~~~~~~l~~l~~~g~~v~i~s~~~~~~~~~~~~~~~gl~~~f~~~~ 142 (237)
..++.......++... +....+.... ......++..++++.|++.|..+.++||.+... . .++..+|+..+||.++
T Consensus 82 ~~f~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~lq~lR~~g~~l~iisN~d~r~-~-~~l~~~~l~~~fD~vv 159 (237)
T KOG3085|consen 82 STFGKAGIDYEEELLENFSFRLFSTFAPSAWKYLDGMQELLQKLRKKGTILGIISNFDDRL-R-LLLLPLGLSAYFDFVV 159 (237)
T ss_pred HHhccccchhHHHHHhhhhhheeccccccCceeccHHHHHHHHHHhCCeEEEEecCCcHHH-H-HHhhccCHHHhhhhhh
Confidence 3333321111222221 1112222111 235677888899999999999999999955443 3 5677889999999999
Q ss_pred eCCCCCccCCCCCHHHHHHHHHHcCCCCCCCCcEEEEecCH-HHHHHHHHcCCeEEEEcCCCC
Q 026543 143 RGDDPEVKQGKPSPDIFLAAAKRFEGGPIDSQEILVFEDAP-SGVLAAKNAGMSVVMVPDPRL 204 (237)
Q Consensus 143 ~~~~~~~~~~kp~~~~~~~~l~~~~~~~~~~~~~~~igD~~-~Di~~a~~~G~~~i~v~~~~~ 204 (237)
.+. +.+..||+|.+|+.++++++ +.|++|++|||+. ||+++|+++||.++.|.....
T Consensus 160 ~S~--e~g~~KPDp~If~~al~~l~---v~Pee~vhIgD~l~nD~~gA~~~G~~ailv~~~~~ 217 (237)
T KOG3085|consen 160 ESC--EVGLEKPDPRIFQLALERLG---VKPEECVHIGDLLENDYEGARNLGWHAILVDNSIT 217 (237)
T ss_pred hhh--hhccCCCChHHHHHHHHHhC---CChHHeEEecCccccccHhHHHcCCEEEEEccccc
Confidence 998 89999999999999999999 9999999999999 999999999999999986544
|
|
| >TIGR01549 HAD-SF-IA-v1 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E | Back alignment and domain information |
|---|
Probab=99.93 E-value=3.9e-24 Score=152.64 Aligned_cols=154 Identities=25% Similarity=0.374 Sum_probs=117.8
Q ss_pred EEEEecCcccccchhhHHHHHHHHHHHcCCCCCHHHHHHhcCCChHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHhhcC
Q 026543 12 HVIFDMDGLLLDTEKFYTEVQELILARYNKTFDWSLKAKMMGKKAIEAAQVFVEETGISDKLSAEDFLVQREETLQTLFP 91 (237)
Q Consensus 12 ~vifD~DGTL~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 91 (237)
+|+||+||||+|+...+..+|..++++++. +.+.+....|.+.... ..+.. .++++.. +..
T Consensus 1 ~iifD~DGTL~d~~~~~~~~~~~~~~~~~~--~~~~~~~~~g~~~~~~-~~~~~---------------~~~~~~~-~~~ 61 (154)
T TIGR01549 1 AILFDIDGTLVDSSFAIRRAFEETLEEFGE--DFQALKALRGLAEELL-YRIAT---------------SFEELLG-YDA 61 (154)
T ss_pred CeEecCCCcccccHHHHHHHHHHHHHHhcc--cHHHHHHHHccChHHH-HHHHH---------------HHHHHhC-cch
Confidence 489999999999999999999999999885 3333333333322221 11111 1111111 223
Q ss_pred CCCCCccHHHHHHHHHhCCCCEEEEeCChhhHHHHHHhhhhhhhhhcceeeeCCCCCccCCCCCHHHHHHHHHHcCCCCC
Q 026543 92 TSELMPGASHLIRHLHAKGIPMCVATGSLARHFELKTQKHRELFSLMHHVVRGDDPEVKQGKPSPDIFLAAAKRFEGGPI 171 (237)
Q Consensus 92 ~~~~~~~~~~~l~~l~~~g~~v~i~s~~~~~~~~~~~~~~~gl~~~f~~~~~~~~~~~~~~kp~~~~~~~~l~~~~~~~~ 171 (237)
....++|+.++++.|+++|++++|+||+...... ..++.. +..+|+.+++++ +.+ .||++..|.+++++++ +
T Consensus 62 ~~~~~~g~~e~l~~L~~~g~~~~i~T~~~~~~~~-~~~~~~-l~~~f~~i~~~~--~~~-~Kp~~~~~~~~~~~~~---~ 133 (154)
T TIGR01549 62 EEAYIRGAADLLKRLKEAGIKLGIISNGSLRAQK-LLLRKH-LGDYFDLILGSD--EFG-AKPEPEIFLAALESLG---L 133 (154)
T ss_pred hheeccCHHHHHHHHHHCcCeEEEEeCCchHHHH-HHHHHH-HHhcCcEEEecC--CCC-CCcCHHHHHHHHHHcC---C
Confidence 4567899999999999999999999998776655 355665 788999999888 677 8999999999999999 9
Q ss_pred CCCcEEEEecCHHHHHHHHHcC
Q 026543 172 DSQEILVFEDAPSGVLAAKNAG 193 (237)
Q Consensus 172 ~~~~~~~igD~~~Di~~a~~~G 193 (237)
+| +|++|||+..|+++|+++|
T Consensus 134 ~~-~~l~iGDs~~Di~aa~~aG 154 (154)
T TIGR01549 134 PP-EVLHVGDNLNDIEGARNAG 154 (154)
T ss_pred CC-CEEEEeCCHHHHHHHHHcc
Confidence 99 9999999999999999987
|
HAD subfamilies caused by an overly broad single model. |
| >TIGR00338 serB phosphoserine phosphatase SerB | Back alignment and domain information |
|---|
Probab=99.92 E-value=3.1e-24 Score=161.95 Aligned_cols=193 Identities=19% Similarity=0.221 Sum_probs=126.7
Q ss_pred CCCccEEEEecCcccccchhhHHHHHHHHHHHcCCCCCHHHH-HHhc-C-CChHHHHHHHHHHhCCCCCCCHHHHHHHHH
Q 026543 7 KKPITHVIFDMDGLLLDTEKFYTEVQELILARYNKTFDWSLK-AKMM-G-KKAIEAAQVFVEETGISDKLSAEDFLVQRE 83 (237)
Q Consensus 7 ~~~~~~vifD~DGTL~~~~~~~~~~~~~~~~~~g~~~~~~~~-~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (237)
++++++++|||||||+++. .+..+++.+|........ .... + .+..+..+.....+.- ...+
T Consensus 11 ~~~~k~iiFD~DGTL~~~~-----~~~~l~~~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~---~~~~------- 75 (219)
T TIGR00338 11 LRSKKLVVFDMDSTLINAE-----TIDEIAKIAGVEEEVSEITERAMRGELDFKASLRERVALLKG---LPVE------- 75 (219)
T ss_pred hccCCEEEEeCcccCCCch-----HHHHHHHHhCCHHHHHHHHHHHHcCCCCHHHHHHHHHHHhCC---CCHH-------
Confidence 4568999999999999985 345666777764332222 1111 1 1222323222222211 2222
Q ss_pred HHHHhhcCCCCCCccHHHHHHHHHhCCCCEEEEeCChhhHHHHHHhhhhhhhhhcceee-------eCC-CCCccCCCCC
Q 026543 84 ETLQTLFPTSELMPGASHLIRHLHAKGIPMCVATGSLARHFELKTQKHRELFSLMHHVV-------RGD-DPEVKQGKPS 155 (237)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~l~~l~~~g~~v~i~s~~~~~~~~~~~~~~~gl~~~f~~~~-------~~~-~~~~~~~kp~ 155 (237)
.+.......++.||+.++++.|+++|++++|+||+...... .+++.+|+..+|+..+ .+. ......++|+
T Consensus 76 -~~~~~~~~~~~~~g~~~~l~~l~~~g~~~~IvS~~~~~~~~-~~l~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~k 153 (219)
T TIGR00338 76 -LLKEVRENLPLTEGAEELVKTLKEKGYKVAVISGGFDLFAE-HVKDKLGLDAAFANRLEVEDGKLTGLVEGPIVDASYK 153 (219)
T ss_pred -HHHHHHhcCCcCCCHHHHHHHHHHCCCEEEEECCCcHHHHH-HHHHHcCCCceEeeEEEEECCEEEEEecCcccCCccc
Confidence 12222234679999999999999999999999997665444 5677788887775322 111 0012234678
Q ss_pred HHHHHHHHHHcCCCCCCCCcEEEEecCHHHHHHHHHcCCeEEEEcCCCCCcccccchhhhhh--hhcccC
Q 026543 156 PDIFLAAAKRFEGGPIDSQEILVFEDAPSGVLAAKNAGMSVVMVPDPRLDSSYHSNADQLLS--SLLGFN 223 (237)
Q Consensus 156 ~~~~~~~l~~~~~~~~~~~~~~~igD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~--~~~el~ 223 (237)
+..+..++++++ +++++|+||||+.+|+++|+.+|+.+++ . ..+.....++++++ ++.++.
T Consensus 154 ~~~~~~~~~~~~---~~~~~~i~iGDs~~Di~aa~~ag~~i~~-~---~~~~~~~~a~~~i~~~~~~~~~ 216 (219)
T TIGR00338 154 GKTLLILLRKEG---ISPENTVAVGDGANDLSMIKAAGLGIAF-N---AKPKLQQKADICINKKDLTDIL 216 (219)
T ss_pred HHHHHHHHHHcC---CCHHHEEEEECCHHHHHHHHhCCCeEEe-C---CCHHHHHhchhccCCCCHHHHH
Confidence 999999999999 9999999999999999999999997543 2 22334566778766 445543
|
Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins. |
| >TIGR01493 HAD-SF-IA-v2 Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase | Back alignment and domain information |
|---|
Probab=99.92 E-value=2.1e-24 Score=157.30 Aligned_cols=161 Identities=14% Similarity=0.236 Sum_probs=119.6
Q ss_pred EEEEecCcccccchhhHHHHHHHHHHHcCCC---C-----CHHHHHHhcC--CChHH----HHHHHHHHhCCCCCCCHHH
Q 026543 12 HVIFDMDGLLLDTEKFYTEVQELILARYNKT---F-----DWSLKAKMMG--KKAIE----AAQVFVEETGISDKLSAED 77 (237)
Q Consensus 12 ~vifD~DGTL~~~~~~~~~~~~~~~~~~g~~---~-----~~~~~~~~~~--~~~~~----~~~~~~~~~~~~~~~~~~~ 77 (237)
+|+||+||||+|+...+..++..++..++.. . .........+ ....+ ..+.+.+++++. ...+.
T Consensus 1 ~viFD~DGTL~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~--~~~~~ 78 (175)
T TIGR01493 1 AMVFDVYGTLVDVHGGVRACLAAIAPEGGAFSDLWRAKQQEYSWRRSLMGDRRAFPEDTVRALRYIADRLGLD--AEPKY 78 (175)
T ss_pred CeEEecCCcCcccHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHhcCcCCHHHHHHHHHHHHHHHcCCC--CCHHH
Confidence 5899999999999998888888877765431 0 1111122222 12122 466677777776 44432
Q ss_pred HHHHHHHHHHhhcCCCCCCccHHHHHHHHHhCCCCEEEEeCChhhHHHHHHhhhhhhhhhcceeeeCCCCCccCCCCCHH
Q 026543 78 FLVQREETLQTLFPTSELMPGASHLIRHLHAKGIPMCVATGSLARHFELKTQKHRELFSLMHHVVRGDDPEVKQGKPSPD 157 (237)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~v~i~s~~~~~~~~~~~~~~~gl~~~f~~~~~~~~~~~~~~kp~~~ 157 (237)
. + . +........++||+.++|+ +++|+||+...... ..+++.|+..+|+.+++++ +.+..||+|+
T Consensus 79 ~-~---~-~~~~~~~~~~~~g~~~~L~-------~~~i~Tn~~~~~~~-~~l~~~~l~~~fd~v~~~~--~~~~~KP~p~ 143 (175)
T TIGR01493 79 G-E---R-LRDAYKNLPPWPDSAAALA-------RVAILSNASHWAFD-QFAQQAGLPWYFDRAFSVD--TVRAYKPDPV 143 (175)
T ss_pred H-H---H-HHHHHhcCCCCCchHHHHH-------HHhhhhCCCHHHHH-HHHHHCCCHHHHhhhccHh--hcCCCCCCHH
Confidence 1 1 1 1122235779999999998 37899998777655 4678889999999999998 8888999999
Q ss_pred HHHHHHHHcCCCCCCCCcEEEEecCHHHHHHHHHc
Q 026543 158 IFLAAAKRFEGGPIDSQEILVFEDAPSGVLAAKNA 192 (237)
Q Consensus 158 ~~~~~l~~~~~~~~~~~~~~~igD~~~Di~~a~~~ 192 (237)
.|..+++++| ++|++|+||||+..|+.+|+++
T Consensus 144 ~f~~~~~~~~---~~p~~~l~vgD~~~Di~~A~~~ 175 (175)
T TIGR01493 144 VYELVFDTVG---LPPDRVLMVAAHQWDLIGARKF 175 (175)
T ss_pred HHHHHHHHHC---CCHHHeEeEecChhhHHHHhcC
Confidence 9999999999 9999999999999999999864
|
The Subfamily IA and IB capping domains are predicted by PSI-PRED to consist of an alpha helical bundle. Subfamily I encompasses such a wide region of sequence space (the sequences are highly divergent) that modelling it with a single alignment is impossible, resulting in an overly broad description which allows in many unrelated sequences. Subfamily IA and IB are separated based on an aparrent phylogenetic bifurcation. Subfamily IA is still too broad to model, but cannot be further subdivided into large chunks based on phylogenetic trees. Of the three motifs defining the HAD superfamily, the third has three variant forms : (1) hhhhsDxxx(x)D, (2) hhhhssxxx(x)D and (3) hhhhDDxxx(x)s where _s_ refers to a small amino acid and _h_ to a hydrophobic one. All three of these variants are found in subfamily IA. Individual models were made based on seeds exhibiting only o |
| >TIGR01691 enolase-ppase 2,3-diketo-5-methylthio-1-phosphopentane phosphatase | Back alignment and domain information |
|---|
Probab=99.91 E-value=2.9e-22 Score=149.32 Aligned_cols=204 Identities=14% Similarity=0.092 Sum_probs=133.1
Q ss_pred ccEEEEecCcccccchhhH-------HHHHHHHHHHcCCCCCHHHHHHhcCCC-hHHHHHHHHHHhCCCC-CCCHHHHHH
Q 026543 10 ITHVIFDMDGLLLDTEKFY-------TEVQELILARYNKTFDWSLKAKMMGKK-AIEAAQVFVEETGISD-KLSAEDFLV 80 (237)
Q Consensus 10 ~~~vifD~DGTL~~~~~~~-------~~~~~~~~~~~g~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~-~~~~~~~~~ 80 (237)
+++|++|+.||+.+..-.. .+.+..++..+......+......+.. .....+.+......+- ......+..
T Consensus 1 ~~~~l~diegt~~~isfv~~~lfpy~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~k~~~lk~lqg 80 (220)
T TIGR01691 1 IKNVLLDIEGTTGSISFVHDVLFPYAASRLESFVNDNYESTIVENLRELGKTPEELILLRKLHAEMDKDRKATPLKTLQG 80 (220)
T ss_pred CCEEEEecCCCcccHHHHHhhhhHHHHHHHHHHHHHhCCCHHHHHHHHhccCCcHHHHHHHHHHHHHcCCCcchHHHHHH
Confidence 4799999999999765321 222333333332221122222222221 1333344444433331 122333433
Q ss_pred H-HHHHHHhhcCCCCCCccHHHHHHHHHhCCCCEEEEeCChhhHHHHHHhhhh---hhhhhcceeeeCCCCCccCCCCCH
Q 026543 81 Q-REETLQTLFPTSELMPGASHLIRHLHAKGIPMCVATGSLARHFELKTQKHR---ELFSLMHHVVRGDDPEVKQGKPSP 156 (237)
Q Consensus 81 ~-~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~v~i~s~~~~~~~~~~~~~~~---gl~~~f~~~~~~~~~~~~~~kp~~ 156 (237)
. +...+.......+++||+.++|+.|+++|++++|+||++..... .++++. ++..+|+.++... . ..||++
T Consensus 81 ~iw~~~Y~~~~~~~~lypgv~e~L~~Lk~~G~~l~I~Sn~s~~~~~-~~~~~~~~~~L~~~f~~~fd~~---~-g~KP~p 155 (220)
T TIGR01691 81 LIWRQGYESGELTSHLYPDVPPALEAWLQLGLRLAVYSSGSVPAQK-LLFGHSDAGNLTPYFSGYFDTT---V-GLKTEA 155 (220)
T ss_pred HHHHHHHhcCCcccCcCcCHHHHHHHHHHCCCEEEEEeCCCHHHHH-HHHhhccccchhhhcceEEEeC---c-ccCCCH
Confidence 3 56666655556789999999999999999999999998766544 344443 5777788776432 2 369999
Q ss_pred HHHHHHHHHcCCCCCCCCcEEEEecCHHHHHHHHHcCCeEEEEcCCCCCccccc--chhhhhhhhcc
Q 026543 157 DIFLAAAKRFEGGPIDSQEILVFEDAPSGVLAAKNAGMSVVMVPDPRLDSSYHS--NADQLLSSLLG 221 (237)
Q Consensus 157 ~~~~~~l~~~~~~~~~~~~~~~igD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~--~~~~~~~~~~e 221 (237)
+.|..+++++| ++|++|+||||+..|+++|+++|+.++++.++.+...... ....++.||++
T Consensus 156 ~~y~~i~~~lg---v~p~e~lfVgDs~~Di~AA~~AG~~ti~v~r~g~~~~~~~~~~~~~~~~~~~~ 219 (220)
T TIGR01691 156 QSYVKIAGQLG---SPPREILFLSDIINELDAARKAGLHTGQLVRPGNDPVVDPSFPVYPQFPDLNA 219 (220)
T ss_pred HHHHHHHHHhC---cChhHEEEEeCCHHHHHHHHHcCCEEEEEECCCCCCCCcccCCCCCeecCccc
Confidence 99999999999 9999999999999999999999999999987665322111 11445666654
|
This enzyme is the enolase-phosphatase of methionine salvage, a pathway that regenerates methionine from methylthioadenosine (MTA). Adenosylmethionine (AdoMet) is a donor of different moieties for various processes, including methylation reactions. Use of AdoMet for spermidine biosynthesis, which leads to polyamine biosynthesis, leaves MTA as a by-product that must be cleared. In Bacillus subtilis and related species, this single protein is replaced by separate enzymes with enolase and phosphatase activities. |
| >PLN02954 phosphoserine phosphatase | Back alignment and domain information |
|---|
Probab=99.90 E-value=6.3e-23 Score=155.34 Aligned_cols=196 Identities=16% Similarity=0.174 Sum_probs=128.2
Q ss_pred CCccEEEEecCcccccchhhHHHHHHHHHHHcCCCCCHHH-HHHhcC--CChHHHHHHHHHHhCCCCCCCHHHHHHHHHH
Q 026543 8 KPITHVIFDMDGLLLDTEKFYTEVQELILARYNKTFDWSL-KAKMMG--KKAIEAAQVFVEETGISDKLSAEDFLVQREE 84 (237)
Q Consensus 8 ~~~~~vifD~DGTL~~~~~~~~~~~~~~~~~~g~~~~~~~-~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (237)
+++|+|+|||||||++++ .+..+++++|....+.. ...+.+ .+..+.+........ ...+.+. .
T Consensus 10 ~~~k~viFDfDGTL~~~~-----~~~~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~----~~~~~~~----~ 76 (224)
T PLN02954 10 RSADAVCFDVDSTVCVDE-----GIDELAEFCGAGEAVAEWTAKAMGGSVPFEEALAARLSLFK----PSLSQVE----E 76 (224)
T ss_pred ccCCEEEEeCCCcccchH-----HHHHHHHHcCChHHHHHHHHHHHCCCCCHHHHHHHHHHHcC----CCHHHHH----H
Confidence 457999999999999985 45777888887533333 333333 233333333222221 1222222 2
Q ss_pred HHHhhcCCCCCCccHHHHHHHHHhCCCCEEEEeCChhhHHHHHHhhhhhhh--hhccee--------eeCCCC--CccCC
Q 026543 85 TLQTLFPTSELMPGASHLIRHLHAKGIPMCVATGSLARHFELKTQKHRELF--SLMHHV--------VRGDDP--EVKQG 152 (237)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~l~~l~~~g~~v~i~s~~~~~~~~~~~~~~~gl~--~~f~~~--------~~~~~~--~~~~~ 152 (237)
..+.. ...++||+.++++.|+++|++++|+|++....+. .+++.+|+. .+|+.. +.+.+. .....
T Consensus 77 ~~~~~--~~~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~-~~l~~~gi~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~ 153 (224)
T PLN02954 77 FLEKR--PPRLSPGIPELVKKLRARGTDVYLVSGGFRQMIA-PVAAILGIPPENIFANQILFGDSGEYAGFDENEPTSRS 153 (224)
T ss_pred HHHHc--cCCCCccHHHHHHHHHHCCCEEEEECCCcHHHHH-HHHHHhCCChhhEEEeEEEEcCCCcEECccCCCcccCC
Confidence 22221 2568999999999999999999999997766554 567888886 345321 111100 11235
Q ss_pred CCCHHHHHHHHHHcCCCCCCCCcEEEEecCHHHHHHHHHcCCeEEEEcCCCC-CcccccchhhhhhhhcccCC
Q 026543 153 KPSPDIFLAAAKRFEGGPIDSQEILVFEDAPSGVLAAKNAGMSVVMVPDPRL-DSSYHSNADQLLSSLLGFNP 224 (237)
Q Consensus 153 kp~~~~~~~~l~~~~~~~~~~~~~~~igD~~~Di~~a~~~G~~~i~v~~~~~-~~~~~~~~~~~~~~~~el~~ 224 (237)
++++..+..++++++ . +++++|||+.+|+++++++|+.++....+.. .+.....++++++++.|+..
T Consensus 154 ~~K~~~i~~~~~~~~---~--~~~i~iGDs~~Di~aa~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~el~~ 221 (224)
T PLN02954 154 GGKAEAVQHIKKKHG---Y--KTMVMIGDGATDLEARKPGGADLFIGYGGVQVREAVAAKADWFVTDFQDLIE 221 (224)
T ss_pred ccHHHHHHHHHHHcC---C--CceEEEeCCHHHHHhhhcCCCCEEEecCCCccCHHHHhcCCEEECCHHHHHH
Confidence 678899999999888 5 5899999999999999988887654433222 22335568999999988754
|
|
| >TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal | Back alignment and domain information |
|---|
Probab=99.89 E-value=9.4e-23 Score=151.90 Aligned_cols=176 Identities=18% Similarity=0.158 Sum_probs=112.6
Q ss_pred CccEEEEecCcccccchhhHHHHHHHHHHHcCCCCCHHHH-H-HhcCC-ChHHHHHHHHHHh-CCCCCCCHHHHHHHHHH
Q 026543 9 PITHVIFDMDGLLLDTEKFYTEVQELILARYNKTFDWSLK-A-KMMGK-KAIEAAQVFVEET-GISDKLSAEDFLVQREE 84 (237)
Q Consensus 9 ~~~~vifD~DGTL~~~~~~~~~~~~~~~~~~g~~~~~~~~-~-~~~~~-~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 84 (237)
++|+|+|||||||+++... +..+...+|........ . ...|. +..+..+.....+ +.......+.
T Consensus 3 ~~k~viFD~DGTLid~~~~----~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~------- 71 (201)
T TIGR01491 3 MIKLIIFDLDGTLTDVMSS----WEYLHRRLETCGLAKKNAELFFSGRISYEEWARLDASLWKRRSGRLRREE------- 71 (201)
T ss_pred cceEEEEeCCCCCcCCccH----HHHHHHHhCchHHHHHHHHHHHcCCCCHHHHHHHHHHHHhhcccCCCHHH-------
Confidence 5789999999999997643 23333445543222111 1 11222 2222222221111 1100011111
Q ss_pred HHHhhcCCCCCCccHHHHHHHHHhCCCCEEEEeCChhhHHHHHHhhhhhhhhhcceeeeCCCCCccCC----------CC
Q 026543 85 TLQTLFPTSELMPGASHLIRHLHAKGIPMCVATGSLARHFELKTQKHRELFSLMHHVVRGDDPEVKQG----------KP 154 (237)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~l~~l~~~g~~v~i~s~~~~~~~~~~~~~~~gl~~~f~~~~~~~~~~~~~~----------kp 154 (237)
+........++||+.++|+.|+++|++++|+||+....+. .+++.+|+..+|+..+..+ +.+.. .+
T Consensus 72 -~~~~~~~~~~~~g~~e~l~~l~~~g~~~~IvS~~~~~~~~-~~l~~~g~~~~~~~~~~~~--~~g~~~p~~~~~~~~~~ 147 (201)
T TIGR01491 72 -VEEIFKEISLRDYAEELVRWLKEKGLKTAIVSGGIMCLAK-KVAEKLNPDYVYSNELVFD--EKGFIQPDGIVRVTFDN 147 (201)
T ss_pred -HHHHHHhCCCCccHHHHHHHHHHCCCEEEEEeCCcHHHHH-HHHHHhCCCeEEEEEEEEc--CCCeEecceeeEEcccc
Confidence 2222234679999999999999999999999997665444 5678888877776555443 22222 23
Q ss_pred CHHHHHHHHHHcCCCCCCCCcEEEEecCHHHHHHHHHcCCeEEEEcCC
Q 026543 155 SPDIFLAAAKRFEGGPIDSQEILVFEDAPSGVLAAKNAGMSVVMVPDP 202 (237)
Q Consensus 155 ~~~~~~~~l~~~~~~~~~~~~~~~igD~~~Di~~a~~~G~~~i~v~~~ 202 (237)
++..+..++++++ +++++++||||+.+|+++|+.+|+.++..+.+
T Consensus 148 k~~~~~~~~~~~~---~~~~~~i~iGDs~~D~~~a~~ag~~~a~~~~~ 192 (201)
T TIGR01491 148 KGEAVERLKRELN---PSLTETVAVGDSKNDLPMFEVADISISLGDEG 192 (201)
T ss_pred HHHHHHHHHHHhC---CCHHHEEEEcCCHhHHHHHHhcCCeEEECCCc
Confidence 4468889999999 99999999999999999999999987765543
|
This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog. |
| >TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase | Back alignment and domain information |
|---|
Probab=99.89 E-value=1.5e-22 Score=147.26 Aligned_cols=126 Identities=20% Similarity=0.243 Sum_probs=96.3
Q ss_pred CCCCccHHHHHHHHHhCCCCEEEEeCChhh--------------HHHHHHhhhhhhhhhcceeeeCCC---------CCc
Q 026543 93 SELMPGASHLIRHLHAKGIPMCVATGSLAR--------------HFELKTQKHRELFSLMHHVVRGDD---------PEV 149 (237)
Q Consensus 93 ~~~~~~~~~~l~~l~~~g~~v~i~s~~~~~--------------~~~~~~~~~~gl~~~f~~~~~~~~---------~~~ 149 (237)
..++||+.++|+.|+++|++++|+||.... ......+...++. |+.++.+.. ...
T Consensus 25 ~~~~pgv~e~L~~Lk~~G~~l~i~TN~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~--~~~i~~~~~~~~~~~~~~~~~ 102 (176)
T TIGR00213 25 FEFIDGVIDALRELKKMGYALVLVTNQSGIARGYFTEAQFEQLTEWMDWSLAERDVD--LDGIYYCPHHPEGVEEFRQVC 102 (176)
T ss_pred eEECCCHHHHHHHHHHCCCEEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHcCCC--ccEEEECCCCCcccccccCCC
Confidence 568999999999999999999999997641 0011122222332 555543210 034
Q ss_pred cCCCCCHHHHHHHHHHcCCCCCCCCcEEEEecCHHHHHHHHHcCCeE-EEEcCCCCCcc-cccchhhhhhhhcccC
Q 026543 150 KQGKPSPDIFLAAAKRFEGGPIDSQEILVFEDAPSGVLAAKNAGMSV-VMVPDPRLDSS-YHSNADQLLSSLLGFN 223 (237)
Q Consensus 150 ~~~kp~~~~~~~~l~~~~~~~~~~~~~~~igD~~~Di~~a~~~G~~~-i~v~~~~~~~~-~~~~~~~~~~~~~el~ 223 (237)
...||+|..|..++++++ +++++|+||||+.+|+++|+++|+.+ ++|.++..... ....++++++++.||.
T Consensus 103 ~~~KP~p~~~~~a~~~~~---~~~~~~v~VGDs~~Di~aA~~aG~~~~i~v~~g~~~~~~~~~~ad~~i~~~~el~ 175 (176)
T TIGR00213 103 DCRKPKPGMLLQARKELH---IDMAQSYMVGDKLEDMQAGVAAKVKTNVLVRTGKPITPEAENIADWVLNSLADLP 175 (176)
T ss_pred CCCCCCHHHHHHHHHHcC---cChhhEEEEcCCHHHHHHHHHCCCcEEEEEecCCcccccccccCCEEeccHHHhh
Confidence 468999999999999999 99999999999999999999999998 79988765332 2356999999999874
|
This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812). |
| >PRK06769 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=99.89 E-value=8.5e-23 Score=147.77 Aligned_cols=127 Identities=18% Similarity=0.168 Sum_probs=98.5
Q ss_pred CCCCccHHHHHHHHHhCCCCEEEEeCChhh--------HHHHHHhhhhhhhhhcceee-eCCCCCccCCCCCHHHHHHHH
Q 026543 93 SELMPGASHLIRHLHAKGIPMCVATGSLAR--------HFELKTQKHRELFSLMHHVV-RGDDPEVKQGKPSPDIFLAAA 163 (237)
Q Consensus 93 ~~~~~~~~~~l~~l~~~g~~v~i~s~~~~~--------~~~~~~~~~~gl~~~f~~~~-~~~~~~~~~~kp~~~~~~~~l 163 (237)
..++||+.++|+.|+++|++++|+||.... .+. ..++..|+..+|.... +++ .....||+|..|..++
T Consensus 27 ~~~~pgv~e~L~~Lk~~G~~l~I~Tn~~~~~~~~~~~~~~~-~~l~~~g~~~~~~~~~~~~~--~~~~~KP~p~~~~~~~ 103 (173)
T PRK06769 27 FTLFPFTKASLQKLKANHIKIFSFTNQPGIADGIATIADFV-QELKGFGFDDIYLCPHKHGD--GCECRKPSTGMLLQAA 103 (173)
T ss_pred eEECCCHHHHHHHHHHCCCEEEEEECCchhcCCcCCHHHHH-HHHHhCCcCEEEECcCCCCC--CCCCCCCCHHHHHHHH
Confidence 558999999999999999999999996531 111 2244445544333222 344 4567899999999999
Q ss_pred HHcCCCCCCCCcEEEEecCHHHHHHHHHcCCeEEEEcCCCCCc--------ccccchhhhhhhhcccCCC
Q 026543 164 KRFEGGPIDSQEILVFEDAPSGVLAAKNAGMSVVMVPDPRLDS--------SYHSNADQLLSSLLGFNPK 225 (237)
Q Consensus 164 ~~~~~~~~~~~~~~~igD~~~Di~~a~~~G~~~i~v~~~~~~~--------~~~~~~~~~~~~~~el~~~ 225 (237)
++++ ++|++|+||||+.+|+.+|+++|+.+|+|.++.... .....++++++++.|+...
T Consensus 104 ~~l~---~~p~~~i~IGD~~~Di~aA~~aGi~~i~v~~g~~~~~~~~~~~~l~~~~~~~~~~~~~el~~~ 170 (173)
T PRK06769 104 EKHG---LDLTQCAVIGDRWTDIVAAAKVNATTILVRTGAGYDALHTYRDKWAHIEPNYIAENFEDAVNW 170 (173)
T ss_pred HHcC---CCHHHeEEEcCCHHHHHHHHHCCCeEEEEecCCCchhhhhhhcccccCCCcchhhCHHHHHHH
Confidence 9999 999999999999999999999999999999875421 2245688999999988554
|
|
| >PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated | Back alignment and domain information |
|---|
Probab=99.88 E-value=1.7e-22 Score=147.70 Aligned_cols=129 Identities=22% Similarity=0.191 Sum_probs=98.6
Q ss_pred CCCCccHHHHHHHHHhCCCCEEEEeCChhh--------------HHHHHHhhhhhhhhhcceeeeCCC---CCccCCCCC
Q 026543 93 SELMPGASHLIRHLHAKGIPMCVATGSLAR--------------HFELKTQKHRELFSLMHHVVRGDD---PEVKQGKPS 155 (237)
Q Consensus 93 ~~~~~~~~~~l~~l~~~g~~v~i~s~~~~~--------------~~~~~~~~~~gl~~~f~~~~~~~~---~~~~~~kp~ 155 (237)
..++||+.++|+.|+++|++++|+||.... ......++..|+ .|+.++.+.+ ...+..||+
T Consensus 28 ~~~~pgv~e~L~~Lk~~g~~l~I~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~--~f~~i~~~~~~~~~~~~~~KP~ 105 (181)
T PRK08942 28 WIPIPGSIEAIARLKQAGYRVVVATNQSGIARGLFTEAQLNALHEKMDWSLADRGG--RLDGIYYCPHHPEDGCDCRKPK 105 (181)
T ss_pred eEECCCHHHHHHHHHHCCCEEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHcCC--ccceEEECCCCCCCCCcCCCCC
Confidence 568999999999999999999999996521 011122333344 3676664321 035678999
Q ss_pred HHHHHHHHHHcCCCCCCCCcEEEEecCHHHHHHHHHcCCeEEEEcCCCCCc-ccccch--hhhhhhhcccCCCC
Q 026543 156 PDIFLAAAKRFEGGPIDSQEILVFEDAPSGVLAAKNAGMSVVMVPDPRLDS-SYHSNA--DQLLSSLLGFNPKD 226 (237)
Q Consensus 156 ~~~~~~~l~~~~~~~~~~~~~~~igD~~~Di~~a~~~G~~~i~v~~~~~~~-~~~~~~--~~~~~~~~el~~~l 226 (237)
|..|..++++++ ++|++|+||||+.+|+.+|+++|+.++++.++.... .....+ +++++++.|+...+
T Consensus 106 p~~~~~~~~~l~---~~~~~~~~VgDs~~Di~~A~~aG~~~i~v~~g~~~~~~~~~~~~~~~ii~~l~el~~~l 176 (181)
T PRK08942 106 PGMLLSIAERLN---IDLAGSPMVGDSLRDLQAAAAAGVTPVLVRTGKGVTTLAEGAAPGTWVLDSLADLPQAL 176 (181)
T ss_pred HHHHHHHHHHcC---CChhhEEEEeCCHHHHHHHHHCCCeEEEEcCCCCchhhhcccCCCceeecCHHHHHHHH
Confidence 999999999999 999999999999999999999999999998876532 223445 88999998876543
|
|
| >PRK11133 serB phosphoserine phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.88 E-value=1.7e-21 Score=153.04 Aligned_cols=187 Identities=17% Similarity=0.200 Sum_probs=122.9
Q ss_pred CCCccEEEEecCcccccchhhHHHHHHHHHHHcCCCCCHHHHH--HhcC-CChHHHHHHHHHHhCCCCCCCHHHHHHHHH
Q 026543 7 KKPITHVIFDMDGLLLDTEKFYTEVQELILARYNKTFDWSLKA--KMMG-KKAIEAAQVFVEETGISDKLSAEDFLVQRE 83 (237)
Q Consensus 7 ~~~~~~vifD~DGTL~~~~~~~~~~~~~~~~~~g~~~~~~~~~--~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (237)
.+++++|+|||||||+.. +++..+++..|......... ...+ ....+.+........- .. +..
T Consensus 107 ~~~~~LvvfDmDGTLI~~-----e~i~eia~~~g~~~~v~~it~~~m~Geldf~esl~~rv~~l~g---~~-~~i----- 172 (322)
T PRK11133 107 LRTPGLLVMDMDSTAIQI-----ECIDEIAKLAGTGEEVAEVTERAMRGELDFEASLRQRVATLKG---AD-ANI----- 172 (322)
T ss_pred ccCCCEEEEECCCCCcch-----HHHHHHHHHhCCchHHHHHHHHHHcCCcCHHHHHHHHHHHhCC---CC-HHH-----
Confidence 356899999999999944 36677777777744332221 1222 2222322222111110 11 111
Q ss_pred HHHHhhcCCCCCCccHHHHHHHHHhCCCCEEEEeCChhhHHHHHHhhhhhhhhhcc-------eeeeCC-CCCccCCCCC
Q 026543 84 ETLQTLFPTSELMPGASHLIRHLHAKGIPMCVATGSLARHFELKTQKHRELFSLMH-------HVVRGD-DPEVKQGKPS 155 (237)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~l~~l~~~g~~v~i~s~~~~~~~~~~~~~~~gl~~~f~-------~~~~~~-~~~~~~~kp~ 155 (237)
++......+++||+.++++.|+++|++++|+|++.... ...+.+.+|+...+. ..+.+. ......++||
T Consensus 173 --l~~v~~~l~l~pGa~elL~~Lk~~G~~~aIvSgg~~~~-~~~l~~~Lgld~~~an~lei~dg~ltg~v~g~iv~~k~K 249 (322)
T PRK11133 173 --LQQVRENLPLMPGLTELVLKLQALGWKVAIASGGFTYF-ADYLRDKLRLDAAVANELEIMDGKLTGNVLGDIVDAQYK 249 (322)
T ss_pred --HHHHHHhCCCChhHHHHHHHHHHcCCEEEEEECCcchh-HHHHHHHcCCCeEEEeEEEEECCEEEeEecCccCCcccH
Confidence 12222347899999999999999999999999977654 335666777754332 222221 0012346899
Q ss_pred HHHHHHHHHHcCCCCCCCCcEEEEecCHHHHHHHHHcCCeEEEEcCCCCCcccccchhhhhh
Q 026543 156 PDIFLAAAKRFEGGPIDSQEILVFEDAPSGVLAAKNAGMSVVMVPDPRLDSSYHSNADQLLS 217 (237)
Q Consensus 156 ~~~~~~~l~~~~~~~~~~~~~~~igD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~ 217 (237)
++.+..+++++| +++++|++|||+.||++|++.+|+.+++ +..+..+..++..++
T Consensus 250 ~~~L~~la~~lg---i~~~qtIaVGDg~NDl~m~~~AGlgiA~----nAkp~Vk~~Ad~~i~ 304 (322)
T PRK11133 250 ADTLTRLAQEYE---IPLAQTVAIGDGANDLPMIKAAGLGIAY----HAKPKVNEQAQVTIR 304 (322)
T ss_pred HHHHHHHHHHcC---CChhhEEEEECCHHHHHHHHHCCCeEEe----CCCHHHHhhCCEEec
Confidence 999999999999 9999999999999999999999987665 344445667777765
|
|
| >KOG3109 consensus Haloacid dehalogenase-like hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.87 E-value=1.1e-20 Score=135.09 Aligned_cols=201 Identities=16% Similarity=0.166 Sum_probs=137.3
Q ss_pred CCCccEEEEecCcccccchhhHHHHHH----HH-HHHcCCCCCHHHHHH-hcCCChHHHHHHHHHHhCCCCCCCHHHHHH
Q 026543 7 KKPITHVIFDMDGLLLDTEKFYTEVQE----LI-LARYNKTFDWSLKAK-MMGKKAIEAAQVFVEETGISDKLSAEDFLV 80 (237)
Q Consensus 7 ~~~~~~vifD~DGTL~~~~~~~~~~~~----~~-~~~~g~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (237)
.+++++++||+|.||+.....+..... ++ .+++|+..+...-.. -........++.+... +.. ....++.+
T Consensus 12 ~~~~~~l~FDiDdtLYp~St~i~~~~~~nI~~f~~eklgi~~e~a~~L~~~~yk~YG~t~aGL~~~-~~~--~d~deY~~ 88 (244)
T KOG3109|consen 12 GPNYKCLFFDIDDTLYPLSTGIQLMMRNNIQEFFVEKLGISEEEAEELRESLYKEYGLTMAGLKAV-GYI--FDADEYHR 88 (244)
T ss_pred CccceEEEEecccccccCchhHHHHHHHHHHHHHHHHhCCChhhhHHHHHHHHHHHhHHHHHHHHh-ccc--CCHHHHHH
Confidence 457899999999999987765554444 33 356677544322111 0001111222222221 212 33444444
Q ss_pred HHHHHHHhhcCCCCCCccHHHHHHHHHhCCCCEEEEeCChhhHHHHHHhhhhhhhhhcceeeeCC--CC--CccCCCCCH
Q 026543 81 QREETLQTLFPTSELMPGASHLIRHLHAKGIPMCVATGSLARHFELKTQKHRELFSLMHHVVRGD--DP--EVKQGKPSP 156 (237)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~v~i~s~~~~~~~~~~~~~~~gl~~~f~~~~~~~--~~--~~~~~kp~~ 156 (237)
+.....- ...++|.+-++++|-.|++++ .+++||+...+.. +.++.+|+.++|+.+++.+ .+ ..-..||.+
T Consensus 89 ~V~~~LP--lq~LkPD~~LRnlLL~l~~r~--k~~FTNa~k~HA~-r~Lk~LGieDcFegii~~e~~np~~~~~vcKP~~ 163 (244)
T KOG3109|consen 89 FVHGRLP--LQDLKPDPVLRNLLLSLKKRR--KWIFTNAYKVHAI-RILKKLGIEDCFEGIICFETLNPIEKTVVCKPSE 163 (244)
T ss_pred HhhccCc--HhhcCCCHHHHHHHHhCcccc--EEEecCCcHHHHH-HHHHHhChHHhccceeEeeccCCCCCceeecCCH
Confidence 3332211 123788999999999998764 8999998887766 5789999999999999875 10 122579999
Q ss_pred HHHHHHHHHcCCCCCC-CCcEEEEecCHHHHHHHHHcCCeEEEEcCCCCCcccccchhhhhhhhccc
Q 026543 157 DIFLAAAKRFEGGPID-SQEILVFEDAPSGVLAAKNAGMSVVMVPDPRLDSSYHSNADQLLSSLLGF 222 (237)
Q Consensus 157 ~~~~~~l~~~~~~~~~-~~~~~~igD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~~~~el 222 (237)
++|+++.+..| +. |.+++||+||.++|.+|++.||.+++|..... ..+++.++.+..+.
T Consensus 164 ~afE~a~k~ag---i~~p~~t~FfDDS~~NI~~ak~vGl~tvlv~~~~~----~~~~d~~l~~ih~~ 223 (244)
T KOG3109|consen 164 EAFEKAMKVAG---IDSPRNTYFFDDSERNIQTAKEVGLKTVLVGREHK----IKGVDYALEQIHNN 223 (244)
T ss_pred HHHHHHHHHhC---CCCcCceEEEcCchhhHHHHHhccceeEEEEeeec----ccchHHHHHHhhch
Confidence 99999999999 88 99999999999999999999999999977554 35566666666555
|
|
| >TIGR01672 AphA HAD superfamily (subfamily IIIB) phosphatase, TIGR01672 | Back alignment and domain information |
|---|
Probab=99.87 E-value=5.9e-21 Score=143.31 Aligned_cols=147 Identities=18% Similarity=0.144 Sum_probs=108.2
Q ss_pred EEEEecCcccccchhhHHHHHHHHHHHcCCC-CCHHHHHHhcCCChHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHhhc
Q 026543 12 HVIFDMDGLLLDTEKFYTEVQELILARYNKT-FDWSLKAKMMGKKAIEAAQVFVEETGISDKLSAEDFLVQREETLQTLF 90 (237)
Q Consensus 12 ~vifD~DGTL~~~~~~~~~~~~~~~~~~g~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (237)
+|+||+||||+|+.+.+ .+|.. .+.+.+..+.+.. +.+.+.... .
T Consensus 65 aViFDlDgTLlDSs~~~---------~~G~~~~s~~~~~~l~g~~----------------------~w~~~~~~~---~ 110 (237)
T TIGR01672 65 AVSFDIDDTVLFSSPGF---------WRGKKTFSPGSEDYLKNQV----------------------FWEKVNNGW---D 110 (237)
T ss_pred EEEEeCCCccccCcHHH---------hCCcccCCHHHhhhhcChH----------------------HHHHHHHhc---c
Confidence 99999999999999765 15554 2333333333321 111111111 1
Q ss_pred CCCCCCccHHHHHHHHHhCCCCEEEEeCCh---hhHHHHHHhhhhhhhhhcceeeeCCCCCccCCCCCHHHHHHHHHHcC
Q 026543 91 PTSELMPGASHLIRHLHAKGIPMCVATGSL---ARHFELKTQKHRELFSLMHHVVRGDDPEVKQGKPSPDIFLAAAKRFE 167 (237)
Q Consensus 91 ~~~~~~~~~~~~l~~l~~~g~~v~i~s~~~---~~~~~~~~~~~~gl~~~f~~~~~~~~~~~~~~kp~~~~~~~~l~~~~ 167 (237)
....+.+++.++|+.++++|++++++||.. .......+++.+|+..+|+.+++++ .....||.+. .++++++
T Consensus 111 ~~s~p~~~a~elL~~l~~~G~~i~iVTnr~~~k~~~~a~~ll~~lGi~~~f~~i~~~d--~~~~~Kp~~~---~~l~~~~ 185 (237)
T TIGR01672 111 EFSIPKEVARQLIDMHQRRGDAIFFVTGRTPGKTDTVSKTLAKNFHIPAMNPVIFAGD--KPGQYQYTKT---QWIQDKN 185 (237)
T ss_pred cCCcchhHHHHHHHHHHHCCCEEEEEeCCCCCcCHHHHHHHHHHhCCchheeEEECCC--CCCCCCCCHH---HHHHhCC
Confidence 235577779999999999999999999973 3335556788899999999999888 6666777764 3567787
Q ss_pred CCCCCCCcEEEEecCHHHHHHHHHcCCeEEEEcCCCC
Q 026543 168 GGPIDSQEILVFEDAPSGVLAAKNAGMSVVMVPDPRL 204 (237)
Q Consensus 168 ~~~~~~~~~~~igD~~~Di~~a~~~G~~~i~v~~~~~ 204 (237)
+ ++||||+.+|+.+|+++|++++.|.++.+
T Consensus 186 ---i----~i~vGDs~~DI~aAk~AGi~~I~V~~g~~ 215 (237)
T TIGR01672 186 ---I----RIHYGDSDNDITAAKEAGARGIRILRASN 215 (237)
T ss_pred ---C----eEEEeCCHHHHHHHHHCCCCEEEEEecCC
Confidence 5 79999999999999999999999988776
|
Supporting evidence for the inclusion in the HAD superfamily, whose phosphatase members are magnesium dependent, is the inhibition by EDTA and calcium ions, and stimulation by magnesium ion. |
| >TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain | Back alignment and domain information |
|---|
Probab=99.86 E-value=2.2e-21 Score=136.91 Aligned_cols=105 Identities=28% Similarity=0.345 Sum_probs=82.3
Q ss_pred CCCCccHHHHHHHHHhCCCCEEEEeCChhh--------------HHHHHHhhhhhhhhh--cceee-eCCCCCccCCCCC
Q 026543 93 SELMPGASHLIRHLHAKGIPMCVATGSLAR--------------HFELKTQKHRELFSL--MHHVV-RGDDPEVKQGKPS 155 (237)
Q Consensus 93 ~~~~~~~~~~l~~l~~~g~~v~i~s~~~~~--------------~~~~~~~~~~gl~~~--f~~~~-~~~~~~~~~~kp~ 155 (237)
..++||+.++|+.|+++|++++|+||.... ......++.+|+... |.... +++ ..+..||+
T Consensus 26 ~~~~~g~~~~l~~Lk~~g~~~~I~Sn~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~--~~~~~KP~ 103 (147)
T TIGR01656 26 WQLRPGAVPALLTLRAAGYTVVVVTNQSGIGRGYFSAEAFRAPNGRVLELLRQLGVAVDGVLFCPHHPAD--NCSCRKPK 103 (147)
T ss_pred eEEcCChHHHHHHHHHCCCEEEEEeCCCcccCCcCCHHHHHHHHHHHHHHHHhCCCceeEEEECCCCCCC--CCCCCCCC
Confidence 458999999999999999999999996521 122234556666421 11111 133 44567999
Q ss_pred HHHHHHHHHHcCCCCCCCCcEEEEecCHHHHHHHHHcCCeEEEEcCC
Q 026543 156 PDIFLAAAKRFEGGPIDSQEILVFEDAPSGVLAAKNAGMSVVMVPDP 202 (237)
Q Consensus 156 ~~~~~~~l~~~~~~~~~~~~~~~igD~~~Di~~a~~~G~~~i~v~~~ 202 (237)
++.++.++++++ +++++|+||||+..|+++|+++|+++++|..|
T Consensus 104 ~~~~~~~~~~~~---~~~~e~i~IGDs~~Di~~A~~~Gi~~v~i~~~ 147 (147)
T TIGR01656 104 PGLILEALKRLG---VDASRSLVVGDRLRDLQAARNAGLAAVLLVDG 147 (147)
T ss_pred HHHHHHHHHHcC---CChHHEEEEcCCHHHHHHHHHCCCCEEEecCC
Confidence 999999999999 99999999999999999999999999999764
|
This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3. |
| >TIGR01685 MDP-1 magnesium-dependent phosphatase-1 | Back alignment and domain information |
|---|
Probab=99.85 E-value=4.7e-22 Score=142.30 Aligned_cols=108 Identities=16% Similarity=0.166 Sum_probs=91.8
Q ss_pred CCCCCccHHHHHHHHHhCCCCEEEEeCChhhHHHHHHhhhhhhh---------hhcceeeeCCCCCccCCCCCHHHHHHH
Q 026543 92 TSELMPGASHLIRHLHAKGIPMCVATGSLARHFELKTQKHRELF---------SLMHHVVRGDDPEVKQGKPSPDIFLAA 162 (237)
Q Consensus 92 ~~~~~~~~~~~l~~l~~~g~~v~i~s~~~~~~~~~~~~~~~gl~---------~~f~~~~~~~~~~~~~~kp~~~~~~~~ 162 (237)
...++||+.++|+.|+++|++++|+||+.........++.+++. .+|+.+++++ .....||.+..+..+
T Consensus 43 ~~~l~pGv~elL~~Lk~~G~~l~I~Sn~~~~~~~~~~L~~~~l~~~~~~~~~~~~Fd~iv~~~--~~~~~kp~~~i~~~~ 120 (174)
T TIGR01685 43 EVTLIKEVRDVLQTLKDAGTYLATASWNDVPEWAYEILGTFEITYAGKTVPMHSLFDDRIEIY--KPNKAKQLEMILQKV 120 (174)
T ss_pred EEEEcccHHHHHHHHHHCCCEEEEEeCCCChHHHHHHHHhCCcCCCCCcccHHHhceeeeecc--CCchHHHHHHHHHHh
Confidence 47899999999999999999999999873444444567888887 9999999988 555667777777777
Q ss_pred HHHc--CCCCCCCCcEEEEecCHHHHHHHHHcCCeEEEEcCCCC
Q 026543 163 AKRF--EGGPIDSQEILVFEDAPSGVLAAKNAGMSVVMVPDPRL 204 (237)
Q Consensus 163 l~~~--~~~~~~~~~~~~igD~~~Di~~a~~~G~~~i~v~~~~~ 204 (237)
.+.+ + ++|++|+||||++.|+++|+++|+.++++.++..
T Consensus 121 ~~~~~~g---l~p~e~l~VgDs~~di~aA~~aGi~~i~v~~g~~ 161 (174)
T TIGR01685 121 NKVDPSV---LKPAQILFFDDRTDNVREVWGYGVTSCYCPSGMD 161 (174)
T ss_pred hhcccCC---CCHHHeEEEcChhHhHHHHHHhCCEEEEcCCCcc
Confidence 7777 8 9999999999999999999999999999988754
|
This model represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterized as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues. |
| >TIGR01261 hisB_Nterm histidinol-phosphatase | Back alignment and domain information |
|---|
Probab=99.85 E-value=1.2e-20 Score=134.39 Aligned_cols=105 Identities=17% Similarity=0.240 Sum_probs=88.5
Q ss_pred CCCCccHHHHHHHHHhCCCCEEEEeCCh--------------hhHHHHHHhhhhhhhhhccee-ee----CCCCCccCCC
Q 026543 93 SELMPGASHLIRHLHAKGIPMCVATGSL--------------ARHFELKTQKHRELFSLMHHV-VR----GDDPEVKQGK 153 (237)
Q Consensus 93 ~~~~~~~~~~l~~l~~~g~~v~i~s~~~--------------~~~~~~~~~~~~gl~~~f~~~-~~----~~~~~~~~~k 153 (237)
+.++||+.++|+.|+++|++++|+||.. .......+++..|+. |+.+ ++ ++ +....|
T Consensus 28 ~~~~pgv~e~L~~L~~~g~~l~IvSN~~g~~~~~~~~~~~~~~~~~~~~~l~~~gl~--fd~ii~~~~~~~~--~~~~~K 103 (161)
T TIGR01261 28 LRFEKGVIPALLKLKKAGYKFVMVTNQDGLGTPSFPQADFDGPHNLMLQIFRSQGII--FDDVLICPHFPDD--NCDCRK 103 (161)
T ss_pred eeECCCHHHHHHHHHHCCCeEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHCCCc--eeEEEECCCCCCC--CCCCCC
Confidence 6799999999999999999999999952 122333566777775 7655 44 45 677889
Q ss_pred CCHHHHHHHHHHcCCCCCCCCcEEEEecCHHHHHHHHHcCCeEEEEcCCCC
Q 026543 154 PSPDIFLAAAKRFEGGPIDSQEILVFEDAPSGVLAAKNAGMSVVMVPDPRL 204 (237)
Q Consensus 154 p~~~~~~~~l~~~~~~~~~~~~~~~igD~~~Di~~a~~~G~~~i~v~~~~~ 204 (237)
|++..+..++++++ +++++++||||+.+|+++|+++|+++++|.++.-
T Consensus 104 P~~~~~~~~~~~~~---~~~~e~l~IGD~~~Di~~A~~aGi~~i~~~~~~~ 151 (161)
T TIGR01261 104 PKIKLLEPYLKKNL---IDKARSYVIGDRETDMQLAENLGIRGIQYDEEEL 151 (161)
T ss_pred CCHHHHHHHHHHcC---CCHHHeEEEeCCHHHHHHHHHCCCeEEEEChhhc
Confidence 99999999999999 9999999999999999999999999999987643
|
This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis. |
| >PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=99.83 E-value=1.3e-19 Score=136.56 Aligned_cols=190 Identities=13% Similarity=0.171 Sum_probs=120.7
Q ss_pred cEEEEecCcccccchhhHHHHHHHHHHHcCCCCCHHHHHH-h--cCCChHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHH
Q 026543 11 THVIFDMDGLLLDTEKFYTEVQELILARYNKTFDWSLKAK-M--MGKKAIEAAQVFVEETGISDKLSAEDFLVQREETLQ 87 (237)
Q Consensus 11 ~~vifD~DGTL~~~~~~~~~~~~~~~~~~g~~~~~~~~~~-~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (237)
++|+|||||||++++..+ . ++++++. ..++...+ + ...+..+.++..++.+... ..+++.+.+
T Consensus 4 ~~vifDfDgTi~~~d~~~-~----~~~~~~~-~~~~~i~~~~~~g~~~~~~~~~~~~~~l~~~---~~~~~~~~~----- 69 (219)
T PRK09552 4 IQIFCDFDGTITNNDNII-A----IMKKFAP-PEWEELKDDILSQELSIQEGVGQMFQLLPSN---LKEEIIQFL----- 69 (219)
T ss_pred cEEEEcCCCCCCcchhhH-H----HHHHhCH-HHHHHHHHHHHhCCcCHHHHHHHHHHhCCCC---chHHHHHHH-----
Confidence 589999999999988643 2 3344443 22332221 1 1224556666666654322 112222211
Q ss_pred hhcCCCCCCccHHHHHHHHHhCCCCEEEEeCChhhHHHHHHhhhhhhhh--hc--ceeeeCCCCCccCCCCCHHH-----
Q 026543 88 TLFPTSELMPGASHLIRHLHAKGIPMCVATGSLARHFELKTQKHRELFS--LM--HHVVRGDDPEVKQGKPSPDI----- 158 (237)
Q Consensus 88 ~~~~~~~~~~~~~~~l~~l~~~g~~v~i~s~~~~~~~~~~~~~~~gl~~--~f--~~~~~~~~~~~~~~kp~~~~----- 158 (237)
.....++||+.++++.|+++|++++|+|++....+. .+++.. +.. .+ +..+.++ .....||.|..
T Consensus 70 --~~~~~l~pG~~e~l~~l~~~g~~~~IvS~~~~~~i~-~il~~~-~~~~~i~~n~~~~~~~--~~~~~kp~p~~~~~~~ 143 (219)
T PRK09552 70 --LETAEIREGFHEFVQFVKENNIPFYVVSGGMDFFVY-PLLQGL-IPKEQIYCNGSDFSGE--YITITWPHPCDEHCQN 143 (219)
T ss_pred --HhCCCcCcCHHHHHHHHHHcCCeEEEECCCcHHHHH-HHHHHh-CCcCcEEEeEEEecCC--eeEEeccCCccccccc
Confidence 234789999999999999999999999998765544 566655 432 22 3334444 44555665543
Q ss_pred -----HHHHHHHcCCCCCCCCcEEEEecCHHHHHHHHHcCCeEEEEcCCCC-Cc-ccccchhhhhhhhcccCCCC
Q 026543 159 -----FLAAAKRFEGGPIDSQEILVFEDAPSGVLAAKNAGMSVVMVPDPRL-DS-SYHSNADQLLSSLLGFNPKD 226 (237)
Q Consensus 159 -----~~~~l~~~~~~~~~~~~~~~igD~~~Di~~a~~~G~~~i~v~~~~~-~~-~~~~~~~~~~~~~~el~~~l 226 (237)
+..++++++ .++++|+||||+.+|+++|+.+|+..+ .+.- .. .....+...+++|.|+...+
T Consensus 144 ~~~~~K~~~l~~~~---~~~~~~i~iGDs~~Di~aa~~Ag~~~a---~~~l~~~~~~~~~~~~~~~~f~ei~~~l 212 (219)
T PRK09552 144 HCGCCKPSLIRKLS---DTNDFHIVIGDSITDLEAAKQADKVFA---RDFLITKCEELGIPYTPFETFHDVQTEL 212 (219)
T ss_pred cCCCchHHHHHHhc---cCCCCEEEEeCCHHHHHHHHHCCccee---HHHHHHHHHHcCCCccccCCHHHHHHHH
Confidence 457889999 999999999999999999999998333 2211 11 12334666778888875443
|
|
| >PRK13582 thrH phosphoserine phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.83 E-value=1.8e-19 Score=134.65 Aligned_cols=192 Identities=11% Similarity=0.080 Sum_probs=117.2
Q ss_pred ccEEEEecCcccccchhhHHHHHHHHHHHcCCCCCHHHHHHhcCCChHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHhh
Q 026543 10 ITHVIFDMDGLLLDTEKFYTEVQELILARYNKTFDWSLKAKMMGKKAIEAAQVFVEETGISDKLSAEDFLVQREETLQTL 89 (237)
Q Consensus 10 ~~~vifD~DGTL~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (237)
+++|+|||||||++ +.|..+++++|.+...... .........+..-..... ....+.+++ ...
T Consensus 1 ~~~v~FD~DGTL~~------~~~~~~~~~~g~~~~~~~~--~~~~~~~~~~~~~~~~l~-~~~~~~~~i--------~~~ 63 (205)
T PRK13582 1 MEIVCLDLEGVLVP------EIWIAFAEKTGIPELRATT--RDIPDYDVLMKQRLDILD-EHGLGLADI--------QEV 63 (205)
T ss_pred CeEEEEeCCCCChh------hHHHHHHHHcCChHHHHHh--cCCCCHHHHHHHHHHHHH-HcCCCHHHH--------HHH
Confidence 47999999999993 2455666777764221100 001112222222222111 000223333 222
Q ss_pred cCCCCCCccHHHHHHHHHhCCCCEEEEeCChhhHHHHHHhhhhhhhhhcceeeeCCCCC--ccCCCCCHHHHHHHHHHcC
Q 026543 90 FPTSELMPGASHLIRHLHAKGIPMCVATGSLARHFELKTQKHRELFSLMHHVVRGDDPE--VKQGKPSPDIFLAAAKRFE 167 (237)
Q Consensus 90 ~~~~~~~~~~~~~l~~l~~~g~~v~i~s~~~~~~~~~~~~~~~gl~~~f~~~~~~~~~~--~~~~kp~~~~~~~~l~~~~ 167 (237)
....+++||+.++++.|+++ ++++|+||+...... .+++.+|+..+|+..+...+.. .+..++.|.....++++++
T Consensus 64 ~~~~~~~pg~~e~L~~L~~~-~~~~IvS~~~~~~~~-~~l~~~gl~~~f~~~~~~~~~~~i~~~~~~~p~~k~~~l~~~~ 141 (205)
T PRK13582 64 IATLDPLPGAVEFLDWLRER-FQVVILSDTFYEFAG-PLMRQLGWPTLFCHSLEVDEDGMITGYDLRQPDGKRQAVKALK 141 (205)
T ss_pred HHhCCCCCCHHHHHHHHHhc-CCEEEEeCCcHHHHH-HHHHHcCCchhhcceEEECCCCeEECccccccchHHHHHHHHH
Confidence 33477899999999999999 999999997776555 5778888888876544322001 1122334445567777888
Q ss_pred CCCCCCCcEEEEecCHHHHHHHHHcCCeEEEEcCCCCCcccccchhh-hhhhhcccCCCC
Q 026543 168 GGPIDSQEILVFEDAPSGVLAAKNAGMSVVMVPDPRLDSSYHSNADQ-LLSSLLGFNPKD 226 (237)
Q Consensus 168 ~~~~~~~~~~~igD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~-~~~~~~el~~~l 226 (237)
..+.+|+||||+.+|+++++.+|+... +.. ........++. +++++.|+...+
T Consensus 142 ---~~~~~~v~iGDs~~D~~~~~aa~~~v~-~~~--~~~~~~~~~~~~~~~~~~el~~~l 195 (205)
T PRK13582 142 ---SLGYRVIAAGDSYNDTTMLGEADAGIL-FRP--PANVIAEFPQFPAVHTYDELLAAI 195 (205)
T ss_pred ---HhCCeEEEEeCCHHHHHHHHhCCCCEE-ECC--CHHHHHhCCcccccCCHHHHHHHH
Confidence 778999999999999999999997543 322 21122234444 788888875443
|
|
| >TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA | Back alignment and domain information |
|---|
Probab=99.83 E-value=7.6e-20 Score=127.01 Aligned_cols=98 Identities=26% Similarity=0.404 Sum_probs=81.2
Q ss_pred CCCCccHHHHHHHHHhCCCCEEEEeCCh--------hhHHHHHHhhhhhhhhhcceeeeCCCCCccCCCCCHHHHHHHHH
Q 026543 93 SELMPGASHLIRHLHAKGIPMCVATGSL--------ARHFELKTQKHRELFSLMHHVVRGDDPEVKQGKPSPDIFLAAAK 164 (237)
Q Consensus 93 ~~~~~~~~~~l~~l~~~g~~v~i~s~~~--------~~~~~~~~~~~~gl~~~f~~~~~~~~~~~~~~kp~~~~~~~~l~ 164 (237)
..++|++.++|+.|+++|++++++||+. ...+. ..++.+++. ++.++... ...||+++.|..+++
T Consensus 24 ~~~~~~v~~~l~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~-~~l~~~~l~--~~~~~~~~----~~~KP~~~~~~~~~~ 96 (132)
T TIGR01662 24 RILYPEVPDALAELKEAGYKVVIVTNQSGIGRGKFSSGRVA-RRLEELGVP--IDVLYACP----HCRKPKPGMFLEALK 96 (132)
T ss_pred heeCCCHHHHHHHHHHCCCEEEEEECCccccccHHHHHHHH-HHHHHCCCC--EEEEEECC----CCCCCChHHHHHHHH
Confidence 4589999999999999999999999976 43333 456776764 33333222 357999999999999
Q ss_pred Hc-CCCCCCCCcEEEEec-CHHHHHHHHHcCCeEEEEc
Q 026543 165 RF-EGGPIDSQEILVFED-APSGVLAAKNAGMSVVMVP 200 (237)
Q Consensus 165 ~~-~~~~~~~~~~~~igD-~~~Di~~a~~~G~~~i~v~ 200 (237)
++ + ++|++++|||| +.+|+++|+++|+.+|++.
T Consensus 97 ~~~~---~~~~~~v~IGD~~~~Di~~A~~~Gi~~i~~~ 131 (132)
T TIGR01662 97 RFNE---IDPEESVYVGDQDLTDLQAAKRAGLAFILVA 131 (132)
T ss_pred HcCC---CChhheEEEcCCCcccHHHHHHCCCeEEEee
Confidence 99 8 99999999999 6899999999999999985
|
In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme. |
| >TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family | Back alignment and domain information |
|---|
Probab=99.80 E-value=2.7e-19 Score=139.41 Aligned_cols=122 Identities=23% Similarity=0.259 Sum_probs=94.0
Q ss_pred CCccHHHHHHHHHhCCCCEEEEeCChhhHHHHHHhhhhhhhhhcceeee---CCCCCccCCCCCHHHHHHHHHHcCCCCC
Q 026543 95 LMPGASHLIRHLHAKGIPMCVATGSLARHFELKTQKHRELFSLMHHVVR---GDDPEVKQGKPSPDIFLAAAKRFEGGPI 171 (237)
Q Consensus 95 ~~~~~~~~l~~l~~~g~~v~i~s~~~~~~~~~~~~~~~gl~~~f~~~~~---~~~~~~~~~kp~~~~~~~~l~~~~~~~~ 171 (237)
.++++.++++.|+++|+ ++|+||.+............++..+|+.+.. .+ ....+||+|..+..++++++ +
T Consensus 144 ~y~~i~~~l~~L~~~g~-~~i~Tn~d~~~~~~~~~~~~~~g~~~~~i~~~~g~~--~~~~gKP~p~~~~~~~~~~~---~ 217 (279)
T TIGR01452 144 SYAKLREACAHLREPGC-LFVATNRDPWHPLSDGSRTPGTGSLVAAIETASGRQ--PLVVGKPSPYMFECITENFS---I 217 (279)
T ss_pred CHHHHHHHHHHHhcCCC-EEEEeCCCCCCCCcCCCcccChHHHHHHHHHHhCCc--eeccCCCCHHHHHHHHHHhC---C
Confidence 47789999999998886 7899996653322122334455566665543 34 45578999999999999999 9
Q ss_pred CCCcEEEEecCH-HHHHHHHHcCCeEEEEcCCCCCcc-c---------ccchhhhhhhhccc
Q 026543 172 DSQEILVFEDAP-SGVLAAKNAGMSVVMVPDPRLDSS-Y---------HSNADQLLSSLLGF 222 (237)
Q Consensus 172 ~~~~~~~igD~~-~Di~~a~~~G~~~i~v~~~~~~~~-~---------~~~~~~~~~~~~el 222 (237)
+|++|+||||+. .|+++|+++|+++++|.+|..... . ...|+++++++.|+
T Consensus 218 ~~~~~lmIGD~~~tDI~~A~~aGi~si~V~~G~~~~~~l~~~~~~~~~~~~Pd~~~~~l~~l 279 (279)
T TIGR01452 218 DPARTLMVGDRLETDILFGHRCGMTTVLVLSGVSRLEEAQEYLAAGQHDLVPDYVVESLADL 279 (279)
T ss_pred ChhhEEEECCChHHHHHHHHHcCCcEEEECCCCCCHHHHHhhhcccccCCCCCEEecccccC
Confidence 999999999996 999999999999999999876321 1 23689999988875
|
This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association. |
| >cd01427 HAD_like Haloacid dehalogenase-like hydrolases | Back alignment and domain information |
|---|
Probab=99.80 E-value=5.4e-19 Score=123.36 Aligned_cols=103 Identities=30% Similarity=0.398 Sum_probs=88.4
Q ss_pred CCCCCCccHHHHHHHHHhCCCCEEEEeCChhhHHHHHHhhhhhhhhhcceeeeCCCCCccCC----------------CC
Q 026543 91 PTSELMPGASHLIRHLHAKGIPMCVATGSLARHFELKTQKHRELFSLMHHVVRGDDPEVKQG----------------KP 154 (237)
Q Consensus 91 ~~~~~~~~~~~~l~~l~~~g~~v~i~s~~~~~~~~~~~~~~~gl~~~f~~~~~~~~~~~~~~----------------kp 154 (237)
....+++++.++++.|+++|++++++|++...... ..++..++..+++.+++.. ..... ||
T Consensus 21 ~~~~~~~~~~~~l~~l~~~g~~i~ivS~~~~~~~~-~~~~~~~~~~~~~~i~~~~--~~~~~~~~~~~~~~~~~~~~~~~ 97 (139)
T cd01427 21 EELELYPGVKEALKELKEKGIKLALATNKSRREVL-ELLEELGLDDYFDPVITSN--GAAIYYPKEGLFLGGGPFDIGKP 97 (139)
T ss_pred ccCCcCcCHHHHHHHHHHCCCeEEEEeCchHHHHH-HHHHHcCCchhhhheeccc--hhhhhcccccccccccccccCCC
Confidence 34789999999999999999999999997766554 4567778877888888766 33333 99
Q ss_pred CHHHHHHHHHHcCCCCCCCCcEEEEecCHHHHHHHHHcCCeEEEE
Q 026543 155 SPDIFLAAAKRFEGGPIDSQEILVFEDAPSGVLAAKNAGMSVVMV 199 (237)
Q Consensus 155 ~~~~~~~~l~~~~~~~~~~~~~~~igD~~~Di~~a~~~G~~~i~v 199 (237)
++..+..++++++ .+++++++|||+.+|+++++.+|+.+++|
T Consensus 98 ~~~~~~~~~~~~~---~~~~~~~~igD~~~d~~~~~~~g~~~i~v 139 (139)
T cd01427 98 NPDKLLAALKLLG---VDPEEVLMVGDSLNDIEMAKAAGGLGVAV 139 (139)
T ss_pred CHHHHHHHHHHcC---CChhhEEEeCCCHHHHHHHHHcCCceeeC
Confidence 9999999999999 99999999999999999999999998875
|
The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases. |
| >TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase | Back alignment and domain information |
|---|
Probab=99.80 E-value=4.9e-18 Score=125.14 Aligned_cols=159 Identities=15% Similarity=0.173 Sum_probs=100.0
Q ss_pred EEEEecCcccccchhhHHHHHHHHHHHcCCCCCHHHHHHhcCC----ChHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHH
Q 026543 12 HVIFDMDGLLLDTEKFYTEVQELILARYNKTFDWSLKAKMMGK----KAIEAAQVFVEETGISDKLSAEDFLVQREETLQ 87 (237)
Q Consensus 12 ~vifD~DGTL~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (237)
+|+|||||||++.+.. ..+++.++.............. +..+.+.......+ ...+.+.+..
T Consensus 3 ~iiFD~dgTL~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~----- 68 (188)
T TIGR01489 3 VVVSDFDGTITLNDSD-----DWITDKFGPPEANRLLDGVLSKTLSIKFMDRRMKGLLPSG----LKEDEILEVL----- 68 (188)
T ss_pred EEEEeCCCcccCCCch-----HHHHHhcCcchhhHHHHHHhhcCCchHHHHHHHHHHhhcC----CCHHHHHHHH-----
Confidence 6899999999998753 2344445432212222222211 11122222222222 2333333322
Q ss_pred hhcCCCCCCccHHHHHHHHHhCCCCEEEEeCChhhHHHHHHhhhhhhhhhcceeeeCCCC------------------Cc
Q 026543 88 TLFPTSELMPGASHLIRHLHAKGIPMCVATGSLARHFELKTQKHRELFSLMHHVVRGDDP------------------EV 149 (237)
Q Consensus 88 ~~~~~~~~~~~~~~~l~~l~~~g~~v~i~s~~~~~~~~~~~~~~~gl~~~f~~~~~~~~~------------------~~ 149 (237)
...+++||+.++++.|+++|++++|+||+....+. .+++..++..+|+.+++.+.. ..
T Consensus 69 ---~~~~l~~g~~~ll~~l~~~g~~~~i~S~~~~~~~~-~~l~~~~l~~~f~~i~~~~~~~~~~g~~~~~~~~~~~~~~~ 144 (188)
T TIGR01489 69 ---KSAPIDPGFKEFIAFIKEHGIDFIVISDGNDFFID-PVLEGIGEKDVFIEIYSNPASFDNDGRHIVWPHHCHGCCSC 144 (188)
T ss_pred ---HhCCCCccHHHHHHHHHHcCCcEEEEeCCcHHHHH-HHHHHcCChhheeEEeccCceECCCCcEEEecCCCCccCcC
Confidence 23689999999999999999999999997766555 467888899999998875410 11
Q ss_pred cCCCCCHHHHHHHHHHcCCCCCCCCcEEEEecCHHHHHHHHHcCC
Q 026543 150 KQGKPSPDIFLAAAKRFEGGPIDSQEILVFEDAPSGVLAAKNAGM 194 (237)
Q Consensus 150 ~~~kp~~~~~~~~l~~~~~~~~~~~~~~~igD~~~Di~~a~~~G~ 194 (237)
..+.+|+..++.++++. +++++||||+.+|+++|+.+++
T Consensus 145 ~~g~~K~~~~~~~~~~~------~~~~i~iGD~~~D~~aa~~~d~ 183 (188)
T TIGR01489 145 PCGCCKGKVIHKLSEPK------YQHIIYIGDGVTDVCPAKLSDV 183 (188)
T ss_pred CCCCCHHHHHHHHHhhc------CceEEEECCCcchhchHhcCCc
Confidence 12334555555554331 6799999999999999999974
|
Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact. |
| >COG0560 SerB Phosphoserine phosphatase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.79 E-value=5.9e-18 Score=125.75 Aligned_cols=172 Identities=20% Similarity=0.279 Sum_probs=114.4
Q ss_pred CCccEEEEecCcccccchhhHHHHHHHHHHHcCCCCCHH--HHHHhcCC-ChHHHHHHHHH-HhCCCCCCCHHHHHHHHH
Q 026543 8 KPITHVIFDMDGLLLDTEKFYTEVQELILARYNKTFDWS--LKAKMMGK-KAIEAAQVFVE-ETGISDKLSAEDFLVQRE 83 (237)
Q Consensus 8 ~~~~~vifD~DGTL~~~~~~~~~~~~~~~~~~g~~~~~~--~~~~~~~~-~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 83 (237)
++.++++|||||||++ ...+..+....|....-. ....+.+. ......+.... -.| .+.+.+....+
T Consensus 3 ~~~~L~vFD~D~TLi~-----~~~~~~~~~~~g~~~~v~~~t~~~~~~~~~~~~~~~~~v~~l~g----~~~~~v~~~~~ 73 (212)
T COG0560 3 RMKKLAVFDLDGTLIN-----AELIDELARGAGVGEEVLAITERAMRGELDFEESLRLRVALLKG----LPVEVLEEVRE 73 (212)
T ss_pred CccceEEEecccchhh-----HHHHHHHHHHhCCHHHHHHHHHHHhcccccHHHHHHHHHHHhCC----CCHHHHHHHHH
Confidence 4568999999999998 334555555555532211 11111111 11222211111 112 44555444444
Q ss_pred HHHHhhcCCCCCCccHHHHHHHHHhCCCCEEEEeCChhhHHHHHHhhhhhhhhhcceeeeCCCC-----C---ccCCCCC
Q 026543 84 ETLQTLFPTSELMPGASHLIRHLHAKGIPMCVATGSLARHFELKTQKHRELFSLMHHVVRGDDP-----E---VKQGKPS 155 (237)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~l~~l~~~g~~v~i~s~~~~~~~~~~~~~~~gl~~~f~~~~~~~~~-----~---~~~~kp~ 155 (237)
+. .+++||+.++++.++++|++++|+|++.. ....++.+.+|++..+...+..++. . ....+-|
T Consensus 74 ~~-------~~l~~ga~elv~~lk~~G~~v~iiSgg~~-~lv~~ia~~lg~d~~~an~l~~~dG~ltG~v~g~~~~~~~K 145 (212)
T COG0560 74 EF-------LRLTPGAEELVAALKAAGAKVVIISGGFT-FLVEPIAERLGIDYVVANELEIDDGKLTGRVVGPICDGEGK 145 (212)
T ss_pred hc-------CcCCccHHHHHHHHHHCCCEEEEEcCChH-HHHHHHHHHhCCchheeeEEEEeCCEEeceeeeeecCcchH
Confidence 43 78999999999999999999999999666 4555788999988766544333210 1 1123346
Q ss_pred HHHHHHHHHHcCCCCCCCCcEEEEecCHHHHHHHHHcCCeEEEE
Q 026543 156 PDIFLAAAKRFEGGPIDSQEILVFEDAPSGVLAAKNAGMSVVMV 199 (237)
Q Consensus 156 ~~~~~~~l~~~~~~~~~~~~~~~igD~~~Di~~a~~~G~~~i~v 199 (237)
...+..+++++| +++++++++|||.||+.|.+.+|.+.+.-
T Consensus 146 ~~~l~~~~~~~g---~~~~~~~a~gDs~nDlpml~~ag~~ia~n 186 (212)
T COG0560 146 AKALRELAAELG---IPLEETVAYGDSANDLPMLEAAGLPIAVN 186 (212)
T ss_pred HHHHHHHHHHcC---CCHHHeEEEcCchhhHHHHHhCCCCeEeC
Confidence 788889999999 99999999999999999999999876653
|
|
| >TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458 | Back alignment and domain information |
|---|
Probab=99.79 E-value=1.5e-19 Score=138.94 Aligned_cols=127 Identities=19% Similarity=0.162 Sum_probs=99.1
Q ss_pred CCccHHHHHHHHHhCCCCEEEEeCChhhHHHHHHhhhhhhhhhcceeeeCCCC-CccCCCCCHHHHHHHHHHcCCCCCCC
Q 026543 95 LMPGASHLIRHLHAKGIPMCVATGSLARHFELKTQKHRELFSLMHHVVRGDDP-EVKQGKPSPDIFLAAAKRFEGGPIDS 173 (237)
Q Consensus 95 ~~~~~~~~l~~l~~~g~~v~i~s~~~~~~~~~~~~~~~gl~~~f~~~~~~~~~-~~~~~kp~~~~~~~~l~~~~~~~~~~ 173 (237)
.++++.+.++.|++.+.+++++||.+..... ......|+..+|+.+.+.... ....+||++..|..++++++ ++|
T Consensus 121 ~y~~l~~a~~~L~~~~~~~~iatn~~~~~~~-~~~~~~g~g~~~~~i~~~~~~~~~~~gKP~p~~~~~~~~~~~---~~~ 196 (257)
T TIGR01458 121 SYQILNQAFRLLLDGAKPLLIAIGKGRYYKR-KDGLALDVGPFVTALEYATDTKATVVGKPSKTFFLEALRATG---CEP 196 (257)
T ss_pred CHHHHHHHHHHHHcCCCCEEEEeCCCCCCcC-CCCCCCCchHHHHHHHHHhCCCceeecCCCHHHHHHHHHHhC---CCh
Confidence 3568888899999888999999996654332 234556777788776654310 22247999999999999999 999
Q ss_pred CcEEEEecCH-HHHHHHHHcCCeEEEEcCCCCC----cccccchhhhhhhhcccCCC
Q 026543 174 QEILVFEDAP-SGVLAAKNAGMSVVMVPDPRLD----SSYHSNADQLLSSLLGFNPK 225 (237)
Q Consensus 174 ~~~~~igD~~-~Di~~a~~~G~~~i~v~~~~~~----~~~~~~~~~~~~~~~el~~~ 225 (237)
++++||||+. +|+.+|+++|+.+++|.+|... +.....++++++++.|+...
T Consensus 197 ~~~~~vGD~~~~Di~~a~~~G~~~i~v~~G~~~~~~~~~~~~~pd~~~~sl~el~~~ 253 (257)
T TIGR01458 197 EEAVMIGDDCRDDVGGAQDCGMRGIQVRTGKYRPSDEEKINVPPDLTCDSLPHAVDL 253 (257)
T ss_pred hhEEEECCCcHHHHHHHHHcCCeEEEECCCCCChHHhcccCCCCCEEECCHHHHHHH
Confidence 9999999996 9999999999999999887531 12345689999999988654
|
This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published. |
| >TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein | Back alignment and domain information |
|---|
Probab=99.78 E-value=6.9e-17 Score=119.53 Aligned_cols=160 Identities=13% Similarity=0.129 Sum_probs=101.6
Q ss_pred cEEEEecCcccccchhhHHHHHHHHHHHcCCCCCHHHHHHhcCCChHHHHHHH---HHHhCCCCCCCHHHHHHHHHHHHH
Q 026543 11 THVIFDMDGLLLDTEKFYTEVQELILARYNKTFDWSLKAKMMGKKAIEAAQVF---VEETGISDKLSAEDFLVQREETLQ 87 (237)
Q Consensus 11 ~~vifD~DGTL~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~ 87 (237)
++++|||||||++. .|..+..+.|... .............+.+.- .+..| .+.+.+.+.
T Consensus 2 ~la~FDlD~TLi~~------~w~~~~~~~g~~~--~~~~~~~~~~~~~~~~~r~~ll~~~g----~~~~~i~~~------ 63 (203)
T TIGR02137 2 EIACLDLEGVLVPE------IWIAFAEKTGIDA--LKATTRDIPDYDVLMKQRLRILDEHG----LKLGDIQEV------ 63 (203)
T ss_pred eEEEEeCCcccHHH------HHHHHHHHcCCcH--HHHHhcCCcCHHHHHHHHHHHHHHCC----CCHHHHHHH------
Confidence 67999999999964 4677777888521 111111111222222211 11123 334444222
Q ss_pred hhcCCCCCCccHHHHHHHHHhCCCCEEEEeCChhhHHHHHHhhhhhhhhhcce--------eeeCCCCCccCCCCCHHHH
Q 026543 88 TLFPTSELMPGASHLIRHLHAKGIPMCVATGSLARHFELKTQKHRELFSLMHH--------VVRGDDPEVKQGKPSPDIF 159 (237)
Q Consensus 88 ~~~~~~~~~~~~~~~l~~l~~~g~~v~i~s~~~~~~~~~~~~~~~gl~~~f~~--------~~~~~~~~~~~~kp~~~~~ 159 (237)
...++++||+.++++.++++ .+++|+|++.... ...+++.+|+..+|.. .+.+. .. ..++.+...
T Consensus 64 --~~~i~l~pga~ell~~lk~~-~~~~IVS~~~~~~-~~~il~~lgi~~~~an~l~~~~~g~~tG~--~~-~~~~~K~~~ 136 (203)
T TIGR02137 64 --IATLKPLEGAVEFVDWLRER-FQVVILSDTFYEF-SQPLMRQLGFPTLLCHKLEIDDSDRVVGY--QL-RQKDPKRQS 136 (203)
T ss_pred --HHhCCCCccHHHHHHHHHhC-CeEEEEeCChHHH-HHHHHHHcCCchhhceeeEEecCCeeECe--ee-cCcchHHHH
Confidence 23367999999999999998 4999999976654 4468888999877752 22222 11 234444444
Q ss_pred HHHHHHcCCCCCCCCcEEEEecCHHHHHHHHHcCCeEEEEcC
Q 026543 160 LAAAKRFEGGPIDSQEILVFEDAPSGVLAAKNAGMSVVMVPD 201 (237)
Q Consensus 160 ~~~l~~~~~~~~~~~~~~~igD~~~Di~~a~~~G~~~i~v~~ 201 (237)
...+++.+ . ++++|||+.||+.+++.+|.+.++.+.
T Consensus 137 l~~l~~~~---~---~~v~vGDs~nDl~ml~~Ag~~ia~~ak 172 (203)
T TIGR02137 137 VIAFKSLY---Y---RVIAAGDSYNDTTMLSEAHAGILFHAP 172 (203)
T ss_pred HHHHHhhC---C---CEEEEeCCHHHHHHHHhCCCCEEecCC
Confidence 44445555 3 899999999999999999988776544
|
This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338). |
| >TIGR01664 DNA-3'-Pase DNA 3'-phosphatase | Back alignment and domain information |
|---|
Probab=99.77 E-value=5.4e-18 Score=121.52 Aligned_cols=99 Identities=14% Similarity=0.161 Sum_probs=79.6
Q ss_pred CCccHHHHHHHHHhCCCCEEEEeCChhh-----------HHHHHHhhhhhhhhhcceeeeCCCCCccCCCCCHHHHHHHH
Q 026543 95 LMPGASHLIRHLHAKGIPMCVATGSLAR-----------HFELKTQKHRELFSLMHHVVRGDDPEVKQGKPSPDIFLAAA 163 (237)
Q Consensus 95 ~~~~~~~~l~~l~~~g~~v~i~s~~~~~-----------~~~~~~~~~~gl~~~f~~~~~~~~~~~~~~kp~~~~~~~~l 163 (237)
++||+.++|+.|+++|++++|+||.... .....+++.+|+. ++.+++++ .....||++..+..++
T Consensus 43 ~~pgv~e~L~~Lk~~G~~l~I~TN~~~~~~~~~~~~~~~~~i~~~l~~~gl~--~~~ii~~~--~~~~~KP~p~~~~~~~ 118 (166)
T TIGR01664 43 LYPEIPAKLQELDDEGYKIVIFTNQSGIGRGKLSAESFKNKIEAFLEKLKVP--IQVLAATH--AGLYRKPMTGMWEYLQ 118 (166)
T ss_pred ecCCHHHHHHHHHHCCCEEEEEeCCcccccCcccHHHHHHHHHHHHHHcCCC--EEEEEecC--CCCCCCCccHHHHHHH
Confidence 6899999999999999999999996542 1223467777774 35666666 5556899999999999
Q ss_pred HHcCCCCCCCCcEEEEecCH--------HHHHHHHHcCCeEEE
Q 026543 164 KRFEGGPIDSQEILVFEDAP--------SGVLAAKNAGMSVVM 198 (237)
Q Consensus 164 ~~~~~~~~~~~~~~~igD~~--------~Di~~a~~~G~~~i~ 198 (237)
++++.. +++++++||||+. +|+++|+++|+++++
T Consensus 119 ~~~~~~-~~~~~~v~VGD~~~~~~~~~~~Di~aA~~aGi~~~~ 160 (166)
T TIGR01664 119 SQYNSP-IKMTRSFYVGDAAGRKLDFSDADIKFAKNLGLEFKY 160 (166)
T ss_pred HHcCCC-CCchhcEEEECCCCCCCCCchhHHHHHHHCCCCcCC
Confidence 999611 6899999999996 799999999998764
|
The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region. |
| >TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490 | Back alignment and domain information |
|---|
Probab=99.76 E-value=4e-17 Score=121.66 Aligned_cols=123 Identities=21% Similarity=0.228 Sum_probs=94.0
Q ss_pred CCHHHHHHHHHHHHHhhcCCCCCCccHHHHHHHHHhCCCCEEEEeCChhhHHHHHHhhhhhhhhhcce-ee-------eC
Q 026543 73 LSAEDFLVQREETLQTLFPTSELMPGASHLIRHLHAKGIPMCVATGSLARHFELKTQKHRELFSLMHH-VV-------RG 144 (237)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~v~i~s~~~~~~~~~~~~~~~gl~~~f~~-~~-------~~ 144 (237)
.+.+++....+.++.+... ..++|++.++++.++++|++++|+|++....+. .+++.+|+..+|.. +. .+
T Consensus 67 ~~~~~l~~~~~~~~~~~~~-~~~~~~~~~~l~~l~~~g~~v~ivS~s~~~~v~-~~~~~lg~~~~~~~~l~~~~~g~~~g 144 (202)
T TIGR01490 67 LLEEDVRAIVEEFVNQKIE-SILYPEARDLIRWHKAEGHTIVLVSASLTILVK-PLARILGIDNAIGTRLEESEDGIYTG 144 (202)
T ss_pred CCHHHHHHHHHHHHHHHHH-HhccHHHHHHHHHHHHCCCEEEEEeCCcHHHHH-HHHHHcCCcceEecceEEcCCCEEeC
Confidence 5677777777777665443 579999999999999999999999997665444 67788888777654 22 12
Q ss_pred C-CCCccCCCCCHHHHHHHHHHcCCCCCCCCcEEEEecCHHHHHHHHHcCCeEEEEc
Q 026543 145 D-DPEVKQGKPSPDIFLAAAKRFEGGPIDSQEILVFEDAPSGVLAAKNAGMSVVMVP 200 (237)
Q Consensus 145 ~-~~~~~~~kp~~~~~~~~l~~~~~~~~~~~~~~~igD~~~Di~~a~~~G~~~i~v~ 200 (237)
. ......++++...++.++++.+ +++++|+++|||.+|+++++.+|..++..+
T Consensus 145 ~~~~~~~~g~~K~~~l~~~~~~~~---~~~~~~~~~gDs~~D~~~~~~a~~~~~v~~ 198 (202)
T TIGR01490 145 NIDGNNCKGEGKVHALAELLAEEQ---IDLKDSYAYGDSISDLPLLSLVGHPYVVNP 198 (202)
T ss_pred CccCCCCCChHHHHHHHHHHHHcC---CCHHHcEeeeCCcccHHHHHhCCCcEEeCC
Confidence 1 0011234667778999999999 999999999999999999999998766543
|
A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog. |
| >TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase | Back alignment and domain information |
|---|
Probab=99.76 E-value=2.2e-17 Score=123.92 Aligned_cols=188 Identities=14% Similarity=0.178 Sum_probs=112.5
Q ss_pred EEEecCcccccchhhHHHHHHHHHHHcCCCCCHHHH-HHh--cCCChHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHhh
Q 026543 13 VIFDMDGLLLDTEKFYTEVQELILARYNKTFDWSLK-AKM--MGKKAIEAAQVFVEETGISDKLSAEDFLVQREETLQTL 89 (237)
Q Consensus 13 vifD~DGTL~~~~~~~~~~~~~~~~~~g~~~~~~~~-~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (237)
|+|||||||++.+.. ..+++.++.+ .+..+ ..+ ...+..+.++..+..+... ..+++. ....
T Consensus 2 ~~fDFDgTit~~d~~-----~~~~~~~~~~-~~~~~~~~~~~g~~~~~e~~~~~~~~~~~~---~~~~~~----~~~~-- 66 (214)
T TIGR03333 2 IICDFDGTITNNDNI-----ISIMKQFAPP-EWEALKDGVLSKTLSIQEGVGRMFGLLPSS---LKEEIT----SFVL-- 66 (214)
T ss_pred EEeccCCCCCcchhH-----HHHHHHhCcH-HHHHHHHHHHcCCccHHHHHHHHHhhCCCc---hHHHHH----HHHH--
Confidence 799999999977742 2222233221 12211 111 2334566666666554322 111222 2111
Q ss_pred cCCCCCCccHHHHHHHHHhCCCCEEEEeCChhhHHHHHHhhhhhhhhhc---ceeeeCCCCCccCCCCCHHHH-------
Q 026543 90 FPTSELMPGASHLIRHLHAKGIPMCVATGSLARHFELKTQKHRELFSLM---HHVVRGDDPEVKQGKPSPDIF------- 159 (237)
Q Consensus 90 ~~~~~~~~~~~~~l~~l~~~g~~v~i~s~~~~~~~~~~~~~~~gl~~~f---~~~~~~~~~~~~~~kp~~~~~------- 159 (237)
...+++||+.++++.|+++|++++|+|++....+. .+++.++....+ +.++.++ .....+|.+..+
T Consensus 67 -~~~~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~-~il~~~~~~~~i~~n~~~~~~~--~~~~~~p~~~~~~~~~~cg 142 (214)
T TIGR03333 67 -ETAEIREGFREFVAFINEHGIPFYVISGGMDFFVY-PLLEGIVEKDRIYCNEADFSNE--YIHIDWPHPCDGTCQNQCG 142 (214)
T ss_pred -hcCcccccHHHHHHHHHHCCCeEEEECCCcHHHHH-HHHHhhCCcccEEeceeEeeCC--eeEEeCCCCCccccccCCC
Confidence 23789999999999999999999999997665444 455554332332 2333334 444556655443
Q ss_pred ---HHHHHHcCCCCCCCCcEEEEecCHHHHHHHHHcCCeEEEEcCCCC-Ccc-cccchhhhhhhhcccCCC
Q 026543 160 ---LAAAKRFEGGPIDSQEILVFEDAPSGVLAAKNAGMSVVMVPDPRL-DSS-YHSNADQLLSSLLGFNPK 225 (237)
Q Consensus 160 ---~~~l~~~~~~~~~~~~~~~igD~~~Di~~a~~~G~~~i~v~~~~~-~~~-~~~~~~~~~~~~~el~~~ 225 (237)
..++++++ ..+++++||||+.+|+++|+.||+ .+..+.. ... ....+...+++|.|+...
T Consensus 143 ~~K~~~l~~~~---~~~~~~i~iGDg~~D~~~a~~Ad~---~~ar~~l~~~~~~~~~~~~~~~~f~di~~~ 207 (214)
T TIGR03333 143 CCKPSLIRKLS---EPNDYHIVIGDSVTDVEAAKQSDL---CFARDYLLNECEELGLNHAPFQDFYDVRKE 207 (214)
T ss_pred CCHHHHHHHHh---hcCCcEEEEeCCHHHHHHHHhCCe---eEehHHHHHHHHHcCCCccCcCCHHHHHHH
Confidence 57788888 888999999999999999999996 3333221 111 122245556677666443
|
Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX. |
| >PRK11009 aphA acid phosphatase/phosphotransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.75 E-value=5.5e-17 Score=121.82 Aligned_cols=99 Identities=17% Similarity=0.160 Sum_probs=81.1
Q ss_pred CCCCCccHHHHHHHHHhCCCCEEEEeCCh---hhHHHHHHhhhhhh--hhhcceeeeCCCCCccCCCCCHHHHHHHHHHc
Q 026543 92 TSELMPGASHLIRHLHAKGIPMCVATGSL---ARHFELKTQKHREL--FSLMHHVVRGDDPEVKQGKPSPDIFLAAAKRF 166 (237)
Q Consensus 92 ~~~~~~~~~~~l~~l~~~g~~v~i~s~~~---~~~~~~~~~~~~gl--~~~f~~~~~~~~~~~~~~kp~~~~~~~~l~~~ 166 (237)
...+.+|++++|+.|+++|++++++||+. .......+++.+|+ ..+|+.+++++ .. .||.+.. .++++
T Consensus 112 ~a~p~~Ga~elL~~L~~~G~~I~iVTnR~~~k~~~t~~~Llk~~gip~~~~f~vil~gd--~~--~K~~K~~---~l~~~ 184 (237)
T PRK11009 112 FSIPKEVARQLIDMHVKRGDSIYFITGRTATKTETVSKTLADDFHIPADNMNPVIFAGD--KP--GQYTKTQ---WLKKK 184 (237)
T ss_pred cCcchHHHHHHHHHHHHCCCeEEEEeCCCCcccHHHHHHHHHHcCCCcccceeEEEcCC--CC--CCCCHHH---HHHhc
Confidence 47799999999999999999999999964 23345556666888 88899888887 42 5666543 56677
Q ss_pred CCCCCCCCcEEEEecCHHHHHHHHHcCCeEEEEcCCCC
Q 026543 167 EGGPIDSQEILVFEDAPSGVLAAKNAGMSVVMVPDPRL 204 (237)
Q Consensus 167 ~~~~~~~~~~~~igD~~~Di~~a~~~G~~~i~v~~~~~ 204 (237)
+ + ++||||+.+|+.+|++||+.+|.|.++.+
T Consensus 185 ~---i----~I~IGDs~~Di~aA~~AGi~~I~v~~G~~ 215 (237)
T PRK11009 185 N---I----RIFYGDSDNDITAAREAGARGIRILRAAN 215 (237)
T ss_pred C---C----eEEEcCCHHHHHHHHHcCCcEEEEecCCC
Confidence 7 5 89999999999999999999999998776
|
|
| >PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.75 E-value=3e-17 Score=129.89 Aligned_cols=103 Identities=17% Similarity=0.212 Sum_probs=83.8
Q ss_pred CCCCccHHHHHHHHHhCCCCEEEEeCCh--------------hhHHHHHHhhhhhhhhhcceee-e----CCCCCccCCC
Q 026543 93 SELMPGASHLIRHLHAKGIPMCVATGSL--------------ARHFELKTQKHRELFSLMHHVV-R----GDDPEVKQGK 153 (237)
Q Consensus 93 ~~~~~~~~~~l~~l~~~g~~v~i~s~~~--------------~~~~~~~~~~~~gl~~~f~~~~-~----~~~~~~~~~k 153 (237)
..++||+.++|..|+++|++++|+||.+ .......+++..++ +|+.++ + ++ +....|
T Consensus 29 ~~l~pGV~e~L~~Lk~~G~kL~IvTNq~g~G~~~~~~~~l~~~~~~i~~iL~~~gl--~fd~i~i~~~~~sd--~~~~rK 104 (354)
T PRK05446 29 LAFEPGVIPALLKLQKAGYKLVMVTNQDGLGTDSFPQEDFDPPHNLMMQIFESQGI--KFDEVLICPHFPED--NCSCRK 104 (354)
T ss_pred ceECcCHHHHHHHHHhCCCeEEEEECCccccCccccHHHHhhHHHHHHHHHHHcCC--ceeeEEEeCCcCcc--cCCCCC
Confidence 6799999999999999999999999941 11122234555566 366554 3 24 556789
Q ss_pred CCHHHHHHHHHHcCCCCCCCCcEEEEecCHHHHHHHHHcCCeEEEEcCC
Q 026543 154 PSPDIFLAAAKRFEGGPIDSQEILVFEDAPSGVLAAKNAGMSVVMVPDP 202 (237)
Q Consensus 154 p~~~~~~~~l~~~~~~~~~~~~~~~igD~~~Di~~a~~~G~~~i~v~~~ 202 (237)
|++..+..++++++ ++|++++||||+.+|+++|+++|+++|+|+..
T Consensus 105 P~p~~l~~a~~~l~---v~~~~svmIGDs~sDi~aAk~aGi~~I~v~~~ 150 (354)
T PRK05446 105 PKTGLVEEYLAEGA---IDLANSYVIGDRETDVQLAENMGIKGIRYARE 150 (354)
T ss_pred CCHHHHHHHHHHcC---CCcccEEEEcCCHHHHHHHHHCCCeEEEEECC
Confidence 99999999999999 99999999999999999999999999999653
|
|
| >TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like | Back alignment and domain information |
|---|
Probab=99.74 E-value=5.1e-17 Score=118.54 Aligned_cols=97 Identities=19% Similarity=0.255 Sum_probs=74.4
Q ss_pred CCCCCccHHHHHHHHHhCCCCEEEEeCChhhHHHHHHhhhhhhhhhcceeeeCC-C--------C-CccCCCCCHHHHHH
Q 026543 92 TSELMPGASHLIRHLHAKGIPMCVATGSLARHFELKTQKHRELFSLMHHVVRGD-D--------P-EVKQGKPSPDIFLA 161 (237)
Q Consensus 92 ~~~~~~~~~~~l~~l~~~g~~v~i~s~~~~~~~~~~~~~~~gl~~~f~~~~~~~-~--------~-~~~~~kp~~~~~~~ 161 (237)
.+++.||+.++++.++++|++++|+|++....+. .+++.+|+..++...+..+ + . ....+..|+..+..
T Consensus 71 ~~~~~~g~~~~l~~l~~~g~~~~ivS~~~~~~i~-~~~~~~g~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~K~~~l~~ 149 (177)
T TIGR01488 71 QVALRPGARELISWLKERGIDTVIVSGGFDFFVE-PVAEKLGIDDVFANRLEFDDNGLLTGPIEGQVNPEGECKGKVLKE 149 (177)
T ss_pred cCCcCcCHHHHHHHHHHCCCEEEEECCCcHHHHH-HHHHHcCCchheeeeEEECCCCEEeCccCCcccCCcchHHHHHHH
Confidence 4668999999999999999999999997665444 5677778877665433321 0 0 11223455778888
Q ss_pred HHHHcCCCCCCCCcEEEEecCHHHHHHHHHc
Q 026543 162 AAKRFEGGPIDSQEILVFEDAPSGVLAAKNA 192 (237)
Q Consensus 162 ~l~~~~~~~~~~~~~~~igD~~~Di~~a~~~ 192 (237)
++++++ ++++++++|||+.+|+++++.+
T Consensus 150 ~~~~~~---~~~~~~~~iGDs~~D~~~~~~a 177 (177)
T TIGR01488 150 LLEESK---ITLKKIIAVGDSVNDLPMLKLA 177 (177)
T ss_pred HHHHhC---CCHHHEEEEeCCHHHHHHHhcC
Confidence 899999 9999999999999999998764
|
Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences. |
| >TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668 | Back alignment and domain information |
|---|
Probab=99.74 E-value=3.7e-17 Score=117.98 Aligned_cols=99 Identities=18% Similarity=0.220 Sum_probs=80.1
Q ss_pred CCCCccHHHHHHHHHhCCCCEEEEeCChhhHHHHHHhhhhhhhhhcceeeeCCCCCccCCCCCHHHHHHHHHHcCCCCCC
Q 026543 93 SELMPGASHLIRHLHAKGIPMCVATGSLARHFELKTQKHRELFSLMHHVVRGDDPEVKQGKPSPDIFLAAAKRFEGGPID 172 (237)
Q Consensus 93 ~~~~~~~~~~l~~l~~~g~~v~i~s~~~~~~~~~~~~~~~gl~~~f~~~~~~~~~~~~~~kp~~~~~~~~l~~~~~~~~~ 172 (237)
..++|++.++|+.|+++|++++++||+........+.+.+++. ... ...||++..+..++++++ ++
T Consensus 42 ~~~~pgv~e~L~~Lk~~g~~l~I~Sn~~~~~~~~~~~~~~gl~------~~~-----~~~KP~p~~~~~~l~~~~---~~ 107 (170)
T TIGR01668 42 NEAYPALRDWIEELKAAGRKLLIVSNNAGEQRAKAVEKALGIP------VLP-----HAVKPPGCAFRRAHPEMG---LT 107 (170)
T ss_pred CCcChhHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHHcCCE------EEc-----CCCCCChHHHHHHHHHcC---CC
Confidence 3578899999999999999999999976333333344444432 111 236999999999999999 99
Q ss_pred CCcEEEEecCH-HHHHHHHHcCCeEEEEcCCCCC
Q 026543 173 SQEILVFEDAP-SGVLAAKNAGMSVVMVPDPRLD 205 (237)
Q Consensus 173 ~~~~~~igD~~-~Di~~a~~~G~~~i~v~~~~~~ 205 (237)
+++++||||+. .|+.+|+++|+.+++|.++...
T Consensus 108 ~~~~l~IGDs~~~Di~aA~~aGi~~i~v~~g~~~ 141 (170)
T TIGR01668 108 SEQVAVVGDRLFTDVMGGNRNGSYTILVEPLVHP 141 (170)
T ss_pred HHHEEEECCcchHHHHHHHHcCCeEEEEccCcCC
Confidence 99999999998 7999999999999999987763
|
This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family. |
| >TIGR01457 HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydrolase, TIGR01457 | Back alignment and domain information |
|---|
Probab=99.73 E-value=8.8e-18 Score=128.64 Aligned_cols=121 Identities=17% Similarity=0.160 Sum_probs=85.9
Q ss_pred CCccHHHHHHHHHhCCCCEEEEeCChhhHHHH--HHhhhhhhhhhcceeeeCCCCCccCCCCCHHHHHHHHHHcCCCCCC
Q 026543 95 LMPGASHLIRHLHAKGIPMCVATGSLARHFEL--KTQKHRELFSLMHHVVRGDDPEVKQGKPSPDIFLAAAKRFEGGPID 172 (237)
Q Consensus 95 ~~~~~~~~l~~l~~~g~~v~i~s~~~~~~~~~--~~~~~~gl~~~f~~~~~~~~~~~~~~kp~~~~~~~~l~~~~~~~~~ 172 (237)
.++.+...+..|+ +|.+ .++||.+...... .......+...+....+.+ ....+||++..|..++++++ ++
T Consensus 122 ~y~~l~~a~~~l~-~g~~-~i~tN~D~~~~~~~~~~~~~G~~~~~i~~~~~~~--~~~~gKP~~~~~~~~~~~~~---~~ 194 (249)
T TIGR01457 122 DYEKFATATLAIR-KGAH-FIGTNGDLAIPTERGLLPGNGSLITVLEVATGVK--PVYIGKPNAIIMEKAVEHLG---TE 194 (249)
T ss_pred CHHHHHHHHHHHH-CCCe-EEEECCCCCCCCCCCCCCCcHHHHHHHHHHhCCC--ccccCCChHHHHHHHHHHcC---CC
Confidence 3445555566664 4565 7778865543211 1112333444555555666 56678999999999999999 99
Q ss_pred CCcEEEEecCH-HHHHHHHHcCCeEEEEcCCCCCcc--cc--cchhhhhhhhccc
Q 026543 173 SQEILVFEDAP-SGVLAAKNAGMSVVMVPDPRLDSS--YH--SNADQLLSSLLGF 222 (237)
Q Consensus 173 ~~~~~~igD~~-~Di~~a~~~G~~~i~v~~~~~~~~--~~--~~~~~~~~~~~el 222 (237)
+++++||||+. +|+.+|+++|+++++|.+|..... .. ..++++++++.|+
T Consensus 195 ~~~~~~VGD~~~~Di~~a~~~G~~~v~v~~G~~~~~~~~~~~~~pd~~v~~l~~~ 249 (249)
T TIGR01457 195 REETLMVGDNYLTDIRAGIDAGIDTLLVHTGVTKAEEVAGLPIAPTHVVSSLAEW 249 (249)
T ss_pred cccEEEECCCchhhHHHHHHcCCcEEEEcCCCCCHHHHhcCCCCCCEEeCChhhC
Confidence 99999999997 899999999999999998876322 11 4678888888764
|
This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in this model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those. |
| >PRK10444 UMP phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.72 E-value=8.2e-17 Score=122.78 Aligned_cols=72 Identities=24% Similarity=0.308 Sum_probs=62.8
Q ss_pred CccCCCCCHHHHHHHHHHcCCCCCCCCcEEEEecCH-HHHHHHHHcCCeEEEEcCCCCCcc-c---ccchhhhhhhhccc
Q 026543 148 EVKQGKPSPDIFLAAAKRFEGGPIDSQEILVFEDAP-SGVLAAKNAGMSVVMVPDPRLDSS-Y---HSNADQLLSSLLGF 222 (237)
Q Consensus 148 ~~~~~kp~~~~~~~~l~~~~~~~~~~~~~~~igD~~-~Di~~a~~~G~~~i~v~~~~~~~~-~---~~~~~~~~~~~~el 222 (237)
....+||++..+..++++++ +++++|+||||+. +|+.+|+++|+.+++|.+|..... . ...++++++++.|+
T Consensus 169 ~~~~gKP~~~~~~~~~~~~~---~~~~~~v~IGD~~~tDi~~A~~~G~~~vlV~~G~~~~~~l~~~~~~pd~~~~sl~el 245 (248)
T PRK10444 169 PFYVGKPSPWIIRAALNKMQ---AHSEETVIVGDNLRTDILAGFQAGLETILVLSGVSTLDDIDSMPFRPSWIYPSVADI 245 (248)
T ss_pred ccccCCCCHHHHHHHHHHcC---CCcccEEEECCCcHHHHHHHHHcCCCEEEECCCCCCHHHHhcCCCCCCEEECCHHHh
Confidence 44468999999999999999 9999999999997 899999999999999998877422 1 35789999999887
|
|
| >PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase) | Back alignment and domain information |
|---|
Probab=99.72 E-value=2.9e-17 Score=123.52 Aligned_cols=90 Identities=28% Similarity=0.457 Sum_probs=75.2
Q ss_pred CCCCccHHHHHHHHHhCCCCEEEEeCChhhHHHHHHhhhhhhhhhcceeeeCCCCCccCCCCCHHHHHHHHHHcCCCCCC
Q 026543 93 SELMPGASHLIRHLHAKGIPMCVATGSLARHFELKTQKHRELFSLMHHVVRGDDPEVKQGKPSPDIFLAAAKRFEGGPID 172 (237)
Q Consensus 93 ~~~~~~~~~~l~~l~~~g~~v~i~s~~~~~~~~~~~~~~~gl~~~f~~~~~~~~~~~~~~kp~~~~~~~~l~~~~~~~~~ 172 (237)
.+++|++.++++.|++.|++++++|+... .....+.+.+|+ ++.++.+. .. +||.+..+..++++++ ++
T Consensus 126 d~~~~~~~~~l~~L~~~Gi~~~i~TGD~~-~~a~~~~~~lgi---~~~~v~a~--~~--~kP~~k~~~~~i~~l~---~~ 194 (215)
T PF00702_consen 126 DPLRPGAKEALQELKEAGIKVAILTGDNE-STASAIAKQLGI---FDSIVFAR--VI--GKPEPKIFLRIIKELQ---VK 194 (215)
T ss_dssp EEBHTTHHHHHHHHHHTTEEEEEEESSEH-HHHHHHHHHTTS---CSEEEEES--HE--TTTHHHHHHHHHHHHT---CT
T ss_pred CcchhhhhhhhhhhhccCcceeeeecccc-cccccccccccc---cccccccc--cc--ccccchhHHHHHHHHh---cC
Confidence 57899999999999999999999998444 445567777777 44444444 22 6899999999999999 99
Q ss_pred CCcEEEEecCHHHHHHHHHcC
Q 026543 173 SQEILVFEDAPSGVLAAKNAG 193 (237)
Q Consensus 173 ~~~~~~igD~~~Di~~a~~~G 193 (237)
+++|+||||+.||+.|+++||
T Consensus 195 ~~~v~~vGDg~nD~~al~~Ag 215 (215)
T PF00702_consen 195 PGEVAMVGDGVNDAPALKAAG 215 (215)
T ss_dssp GGGEEEEESSGGHHHHHHHSS
T ss_pred CCEEEEEccCHHHHHHHHhCc
Confidence 999999999999999999987
|
This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J .... |
| >TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC | Back alignment and domain information |
|---|
Probab=99.70 E-value=1.2e-16 Score=109.81 Aligned_cols=91 Identities=16% Similarity=0.212 Sum_probs=75.9
Q ss_pred CCCccHHHHHHHHHhCCCCEEEEeCChhhHHHHHHhhhhh-------hhhhcceeeeCCCCCccCCCCCHHHHHHHHHHc
Q 026543 94 ELMPGASHLIRHLHAKGIPMCVATGSLARHFELKTQKHRE-------LFSLMHHVVRGDDPEVKQGKPSPDIFLAAAKRF 166 (237)
Q Consensus 94 ~~~~~~~~~l~~l~~~g~~v~i~s~~~~~~~~~~~~~~~g-------l~~~f~~~~~~~~~~~~~~kp~~~~~~~~l~~~ 166 (237)
.+++|+.++|+.|+++|++++++||++........++..+ +..+|+.+++++ . +|+|..+..+++++
T Consensus 29 ~~~~gv~e~L~~Lk~~g~~l~i~Sn~~~~~~~~~~l~~~~~~~~i~~l~~~f~~~~~~~--~----~pkp~~~~~a~~~l 102 (128)
T TIGR01681 29 VTIKEIRDKLQTLKKNGFLLALASYNDDPHVAYELLKIFEDFGIIFPLAEYFDPLTIGY--W----LPKSPRLVEIALKL 102 (128)
T ss_pred HHHHHHHHHHHHHHHCCeEEEEEeCCCCHHHHHHHHHhccccccchhhHhhhhhhhhcC--C----CcHHHHHHHHHHHh
Confidence 5899999999999999999999999734445545677777 788999988876 2 58899999999999
Q ss_pred CCCCCCCCcEEEEecCHHHHHHHHH
Q 026543 167 EGGPIDSQEILVFEDAPSGVLAAKN 191 (237)
Q Consensus 167 ~~~~~~~~~~~~igD~~~Di~~a~~ 191 (237)
| ..++|++|+||||+..|++..+.
T Consensus 103 g-~~~~p~~~l~igDs~~n~~~~~~ 126 (128)
T TIGR01681 103 N-GVLKPKSILFVDDRPDNNEEVDY 126 (128)
T ss_pred c-CCCCcceEEEECCCHhHHHHHHh
Confidence 8 22689999999999999877654
|
No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC. |
| >COG4229 Predicted enolase-phosphatase [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=99.70 E-value=3.8e-15 Score=103.67 Aligned_cols=122 Identities=18% Similarity=0.216 Sum_probs=94.2
Q ss_pred CCCCCccHHHHHHHHHhCCCCEEEEeCChhhHHHHHH--hhhhhhhhhcceeeeCCCCCccCCCCCHHHHHHHHHHcCCC
Q 026543 92 TSELMPGASHLIRHLHAKGIPMCVATGSLARHFELKT--QKHRELFSLMHHVVRGDDPEVKQGKPSPDIFLAAAKRFEGG 169 (237)
Q Consensus 92 ~~~~~~~~~~~l~~l~~~g~~v~i~s~~~~~~~~~~~--~~~~gl~~~f~~~~~~~~~~~~~~kp~~~~~~~~l~~~~~~ 169 (237)
..+++|++.+.+++.++.|.+++|.|.++......-+ .....|..+|++.+-.. .-.|-....|.+++...|
T Consensus 101 kahlypDav~~ik~wk~~g~~vyiYSSGSV~AQkL~Fghs~agdL~~lfsGyfDtt----iG~KrE~~SY~kIa~~iG-- 174 (229)
T COG4229 101 KAHLYPDAVQAIKRWKALGMRVYIYSSGSVKAQKLFFGHSDAGDLNSLFSGYFDTT----IGKKRESQSYAKIAGDIG-- 174 (229)
T ss_pred ccccCHhHHHHHHHHHHcCCcEEEEcCCCchhHHHhhcccccccHHhhhcceeecc----ccccccchhHHHHHHhcC--
Confidence 4689999999999999999999999998876544211 12334556666665322 224667788999999999
Q ss_pred CCCCCcEEEEecCHHHHHHHHHcCCeEEEEcCCCCCcccccchhhhhhhhc
Q 026543 170 PIDSQEILVFEDAPSGVLAAKNAGMSVVMVPDPRLDSSYHSNADQLLSSLL 220 (237)
Q Consensus 170 ~~~~~~~~~igD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~~~~ 220 (237)
++|.+++|+.|.++.+.+|+.+|+.++.+.++.+.+........+++||+
T Consensus 175 -l~p~eilFLSDn~~EL~AA~~vGl~t~l~~R~g~~P~~d~~~~~~~~sf~ 224 (229)
T COG4229 175 -LPPAEILFLSDNPEELKAAAGVGLATGLAVRPGNAPVPDGQGFLVYKSFE 224 (229)
T ss_pred -CCchheEEecCCHHHHHHHHhcchheeeeecCCCCCCCCCcCceeeechh
Confidence 99999999999999999999999999999887665444444555666665
|
|
| >PLN02645 phosphoglycolate phosphatase | Back alignment and domain information |
|---|
Probab=99.70 E-value=1.4e-17 Score=131.61 Aligned_cols=121 Identities=18% Similarity=0.167 Sum_probs=87.2
Q ss_pred HHHHHHhCCCCEEEEeCChhhHHHHHHhhhhhhhhhcceeeeCCC-CCccCCCCCHHHHHHHHHHcCCCCCCCCcEEEEe
Q 026543 102 LIRHLHAKGIPMCVATGSLARHFELKTQKHRELFSLMHHVVRGDD-PEVKQGKPSPDIFLAAAKRFEGGPIDSQEILVFE 180 (237)
Q Consensus 102 ~l~~l~~~g~~v~i~s~~~~~~~~~~~~~~~gl~~~f~~~~~~~~-~~~~~~kp~~~~~~~~l~~~~~~~~~~~~~~~ig 180 (237)
....|+.++-..+|+||.+........+...|...+|+.+.+... .....+||+|..|..++++++ +++++++|||
T Consensus 178 a~~~l~~~~g~~~i~tn~d~~~~~~~~~~~~g~g~~~~~i~~~~~~~~~~~gKP~p~~~~~a~~~~~---~~~~~~~~VG 254 (311)
T PLN02645 178 ATLCIRENPGCLFIATNRDAVTHLTDAQEWAGAGSMVGAIKGSTEREPLVVGKPSTFMMDYLANKFG---IEKSQICMVG 254 (311)
T ss_pred HHHHHhcCCCCEEEEeCCCCCCCCCCCCCccchHHHHHHHHHHhCCCcccCCCChHHHHHHHHHHcC---CCcccEEEEc
Confidence 344554433458888886553211122344566677777766541 012246999999999999999 9999999999
Q ss_pred cCH-HHHHHHHHcCCeEEEEcCCCCCccc------ccchhhhhhhhcccCCC
Q 026543 181 DAP-SGVLAAKNAGMSVVMVPDPRLDSSY------HSNADQLLSSLLGFNPK 225 (237)
Q Consensus 181 D~~-~Di~~a~~~G~~~i~v~~~~~~~~~------~~~~~~~~~~~~el~~~ 225 (237)
|+. +|+.+|+++|+++++|.+|...... ...++++++++.++...
T Consensus 255 D~~~~Di~~A~~aG~~~ilV~~G~~~~~~~~~~~~~~~pd~~~~~~~~l~~~ 306 (311)
T PLN02645 255 DRLDTDILFGQNGGCKTLLVLSGVTSESMLLSPENKIQPDFYTSKISDFLTL 306 (311)
T ss_pred CCcHHHHHHHHHcCCCEEEEcCCCCCHHHHHhccCCCCCCEEECCHHHHHHH
Confidence 997 9999999999999999888763221 24689999999988554
|
|
| >COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.69 E-value=3.8e-16 Score=107.52 Aligned_cols=95 Identities=20% Similarity=0.326 Sum_probs=76.9
Q ss_pred CCccHHHHHHHHHhCCCCEEEEeCChhhHHHHHHhhhhhhhhhcceeeeCCCCCccCCCCCHHHHHHHHHHcCCCCCCCC
Q 026543 95 LMPGASHLIRHLHAKGIPMCVATGSLARHFELKTQKHRELFSLMHHVVRGDDPEVKQGKPSPDIFLAAAKRFEGGPIDSQ 174 (237)
Q Consensus 95 ~~~~~~~~l~~l~~~g~~v~i~s~~~~~~~~~~~~~~~gl~~~f~~~~~~~~~~~~~~kp~~~~~~~~l~~~~~~~~~~~ 174 (237)
..|.+++-+..++.+|+++.|+||+....+. .+.+.+|+ +.+.. ..||.+..+.+++++++ ++++
T Consensus 47 ~tpe~~~W~~e~k~~gi~v~vvSNn~e~RV~-~~~~~l~v----~fi~~-------A~KP~~~~fr~Al~~m~---l~~~ 111 (175)
T COG2179 47 ATPELRAWLAELKEAGIKVVVVSNNKESRVA-RAAEKLGV----PFIYR-------AKKPFGRAFRRALKEMN---LPPE 111 (175)
T ss_pred CCHHHHHHHHHHHhcCCEEEEEeCCCHHHHH-hhhhhcCC----ceeec-------ccCccHHHHHHHHHHcC---CChh
Confidence 4555666777889999999999996665544 45565554 34432 46999999999999999 9999
Q ss_pred cEEEEecCH-HHHHHHHHcCCeEEEEcCCCC
Q 026543 175 EILVFEDAP-SGVLAAKNAGMSVVMVPDPRL 204 (237)
Q Consensus 175 ~~~~igD~~-~Di~~a~~~G~~~i~v~~~~~ 204 (237)
+|+||||.. +|+.++..+|+.+|.|.+=..
T Consensus 112 ~vvmVGDqL~TDVlggnr~G~~tIlV~Pl~~ 142 (175)
T COG2179 112 EVVMVGDQLFTDVLGGNRAGMRTILVEPLVA 142 (175)
T ss_pred HEEEEcchhhhhhhcccccCcEEEEEEEecc
Confidence 999999999 999999999999999975333
|
|
| >PRK11590 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.66 E-value=6.9e-15 Score=110.12 Aligned_cols=180 Identities=9% Similarity=-0.005 Sum_probs=104.9
Q ss_pred CccEEEEecCcccccchhhHHHHHHHHH-HHcCCCCCH-HHHHHhcCCChHHHHHH-------HHHHhCCCCCCCHHHHH
Q 026543 9 PITHVIFDMDGLLLDTEKFYTEVQELIL-ARYNKTFDW-SLKAKMMGKKAIEAAQV-------FVEETGISDKLSAEDFL 79 (237)
Q Consensus 9 ~~~~vifD~DGTL~~~~~~~~~~~~~~~-~~~g~~~~~-~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~ 79 (237)
+.|+++|||||||++.. ....+..++ +++|..... .......|.+.....+. +....... .+.+++.
T Consensus 5 ~~k~~iFD~DGTL~~~d--~~~~~~~~~~~~~g~~~~~~~~~~~~ig~~l~~~~~~~~~~~~~~~~~~~~g--~~~~~~~ 80 (211)
T PRK11590 5 ERRVVFFDLDGTLHQQD--MFGSFLRYLLRRQPLNLLLVLPLLPVIGLGLLVKGRAARWPMSLLLWGCTFG--HSEARLQ 80 (211)
T ss_pred cceEEEEecCCCCcccc--hHHHHHHHHHHhcchhhHHHhHHHHHhccCcccchhhhhhhHHHHHHHHHcC--CCHHHHH
Confidence 35799999999999333 455555555 778764332 44444555444332211 11111111 3345555
Q ss_pred HHHHHHHHhhcCCCCCCccHHHHH-HHHHhCCCCEEEEeCChhhHHHHHHhhhhhhhhhcceeeeCCC----C--CccCC
Q 026543 80 VQREETLQTLFPTSELMPGASHLI-RHLHAKGIPMCVATGSLARHFELKTQKHRELFSLMHHVVRGDD----P--EVKQG 152 (237)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~l-~~l~~~g~~v~i~s~~~~~~~~~~~~~~~gl~~~f~~~~~~~~----~--~~~~~ 152 (237)
...+.+.+.+.....++||+.++| +.++++|++++|+||+.... ...+++.+|+.. .+.+++.+. + ..+..
T Consensus 81 ~~~~~f~~~~~~~~~~~pga~e~L~~~l~~~G~~l~IvSas~~~~-~~~il~~l~~~~-~~~~i~t~l~~~~tg~~~g~~ 158 (211)
T PRK11590 81 ALEADFVRWFRDNVTAFPVVQERLTTYLLSSDADVWLITGSPQPL-VEQVYFDTPWLP-RVNLIASQMQRRYGGWVLTLR 158 (211)
T ss_pred HHHHHHHHHHHHhCcCCccHHHHHHHHHHhCCCEEEEEeCCcHHH-HHHHHHHccccc-cCceEEEEEEEEEccEECCcc
Confidence 544444333322356799999999 56888899999999966544 445666666422 223333220 0 11110
Q ss_pred CCCHHHHHHHHHHcCCCCCCCCcEEEEecCHHHHHHHHHcCCeEE
Q 026543 153 KPSPDIFLAAAKRFEGGPIDSQEILVFEDAPSGVLAAKNAGMSVV 197 (237)
Q Consensus 153 kp~~~~~~~~l~~~~~~~~~~~~~~~igD~~~Di~~a~~~G~~~i 197 (237)
---.+-...+.+.++ .+...+.+.|||.+|+++...+|-+.+
T Consensus 159 c~g~~K~~~l~~~~~---~~~~~~~aY~Ds~~D~pmL~~a~~~~~ 200 (211)
T PRK11590 159 CLGHEKVAQLERKIG---TPLRLYSGYSDSKQDNPLLYFCQHRWR 200 (211)
T ss_pred CCChHHHHHHHHHhC---CCcceEEEecCCcccHHHHHhCCCCEE
Confidence 001122333444557 677889999999999999999997644
|
|
| >TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family | Back alignment and domain information |
|---|
Probab=99.66 E-value=5.9e-17 Score=115.06 Aligned_cols=99 Identities=20% Similarity=0.222 Sum_probs=76.5
Q ss_pred HHHHHHhCCCCEEEEeCChhhHHHHHHhhhhhhhhhcceeeeCCCCCccCCCCCHHHHHHHHHHcCCCCCCCCcEEEEec
Q 026543 102 LIRHLHAKGIPMCVATGSLARHFELKTQKHRELFSLMHHVVRGDDPEVKQGKPSPDIFLAAAKRFEGGPIDSQEILVFED 181 (237)
Q Consensus 102 ~l~~l~~~g~~v~i~s~~~~~~~~~~~~~~~gl~~~f~~~~~~~~~~~~~~kp~~~~~~~~l~~~~~~~~~~~~~~~igD 181 (237)
.++.|+++|++++|+||....... ..++.+|+..+|+ + .+|++..+..++++++ +++++|+||||
T Consensus 36 ~i~~Lk~~G~~i~IvTn~~~~~~~-~~l~~~gi~~~~~----~-------~~~k~~~~~~~~~~~~---~~~~~~~~vGD 100 (154)
T TIGR01670 36 GIRCALKSGIEVAIITGRKAKLVE-DRCKTLGITHLYQ----G-------QSNKLIAFSDILEKLA---LAPENVAYIGD 100 (154)
T ss_pred HHHHHHHCCCEEEEEECCCCHHHH-HHHHHcCCCEEEe----c-------ccchHHHHHHHHHHcC---CCHHHEEEECC
Confidence 789999999999999997766544 5677777766553 1 2678999999999999 99999999999
Q ss_pred CHHHHHHHHHcCCeEEEEcCCCCCcccccchhhhhhh
Q 026543 182 APSGVLAAKNAGMSVVMVPDPRLDSSYHSNADQLLSS 218 (237)
Q Consensus 182 ~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~~ 218 (237)
+.+|+++++.+|+. +.+.... +.....+++++.+
T Consensus 101 s~~D~~~~~~ag~~-~~v~~~~--~~~~~~a~~i~~~ 134 (154)
T TIGR01670 101 DLIDWPVMEKVGLS-VAVADAH--PLLIPRADYVTRI 134 (154)
T ss_pred CHHHHHHHHHCCCe-EecCCcC--HHHHHhCCEEecC
Confidence 99999999999987 5554432 2234445554443
|
The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved. |
| >PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.64 E-value=9e-16 Score=119.60 Aligned_cols=118 Identities=13% Similarity=0.089 Sum_probs=74.3
Q ss_pred CccHHHHHHHHHhCCCCEEEEeCChh----hHHHHHHhhhhhhhhhcceeeeCCCCCccCCCCCHHHHHHHHHHcCCCCC
Q 026543 96 MPGASHLIRHLHAKGIPMCVATGSLA----RHFELKTQKHRELFSLMHHVVRGDDPEVKQGKPSPDIFLAAAKRFEGGPI 171 (237)
Q Consensus 96 ~~~~~~~l~~l~~~g~~v~i~s~~~~----~~~~~~~~~~~gl~~~f~~~~~~~~~~~~~~kp~~~~~~~~l~~~~~~~~ 171 (237)
++++.+++..++..+..+.++++... ......+.+..++.........-+ ....+..++.+++++++++| +
T Consensus 139 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~e--i~~~~~~K~~~l~~l~~~~g---i 213 (272)
T PRK10530 139 FTQVDSLAQAARQVNAIWKFALTHEDLPQLQHFAKHVEHELGLECEWSWHDQVD--IARKGNSKGKRLTQWVEAQG---W 213 (272)
T ss_pred eEEcccHHHHHhhcCCcEEEEEecCCHHHHHHHHHHHhhhcCceEEEecCceEE--EecCCCChHHHHHHHHHHcC---C
Confidence 45666777777666666666665322 112223333333221100000012 22234457889999999999 9
Q ss_pred CCCcEEEEecCHHHHHHHHHcCCeEEEEcCCCCCcccccchhhhhhhhcc
Q 026543 172 DSQEILVFEDAPSGVLAAKNAGMSVVMVPDPRLDSSYHSNADQLLSSLLG 221 (237)
Q Consensus 172 ~~~~~~~igD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~~~~e 221 (237)
+++++++|||+.||++|++.+|+ +|++++..+..+..|++++++-.+
T Consensus 214 ~~~e~i~~GD~~NDi~m~~~ag~---~vamgna~~~lk~~Ad~v~~~n~~ 260 (272)
T PRK10530 214 SMKNVVAFGDNFNDISMLEAAGL---GVAMGNADDAVKARADLVIGDNTT 260 (272)
T ss_pred CHHHeEEeCCChhhHHHHHhcCc---eEEecCchHHHHHhCCEEEecCCC
Confidence 99999999999999999999995 566666655556778887765443
|
|
| >PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.63 E-value=2.9e-16 Score=114.72 Aligned_cols=98 Identities=19% Similarity=0.234 Sum_probs=74.3
Q ss_pred HHHHHHhCCCCEEEEeCChhhHHHHHHhhhhhhhhhcceeeeCCCCCccCCCCCHHHHHHHHHHcCCCCCCCCcEEEEec
Q 026543 102 LIRHLHAKGIPMCVATGSLARHFELKTQKHRELFSLMHHVVRGDDPEVKQGKPSPDIFLAAAKRFEGGPIDSQEILVFED 181 (237)
Q Consensus 102 ~l~~l~~~g~~v~i~s~~~~~~~~~~~~~~~gl~~~f~~~~~~~~~~~~~~kp~~~~~~~~l~~~~~~~~~~~~~~~igD 181 (237)
.++.|+++|++++|+||.....+. .+++.+|+..+|+ +. ++++..+..+++++| +++++++||||
T Consensus 56 ~i~~L~~~Gi~v~I~T~~~~~~v~-~~l~~lgl~~~f~----g~-------~~k~~~l~~~~~~~g---l~~~ev~~VGD 120 (183)
T PRK09484 56 GIRCLLTSGIEVAIITGRKSKLVE-DRMTTLGITHLYQ----GQ-------SNKLIAFSDLLEKLA---IAPEQVAYIGD 120 (183)
T ss_pred HHHHHHHCCCEEEEEeCCCcHHHH-HHHHHcCCceeec----CC-------CcHHHHHHHHHHHhC---CCHHHEEEECC
Confidence 556677899999999997665544 5677777765554 22 456899999999999 99999999999
Q ss_pred CHHHHHHHHHcCCeEEEEcCCCCCcccccchhhhhh
Q 026543 182 APSGVLAAKNAGMSVVMVPDPRLDSSYHSNADQLLS 217 (237)
Q Consensus 182 ~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~ 217 (237)
+.+|+++++++|+.++ +. ...+.....++++++
T Consensus 121 s~~D~~~a~~aG~~~~-v~--~~~~~~~~~a~~v~~ 153 (183)
T PRK09484 121 DLIDWPVMEKVGLSVA-VA--DAHPLLLPRADYVTR 153 (183)
T ss_pred CHHHHHHHHHCCCeEe-cC--ChhHHHHHhCCEEec
Confidence 9999999999999844 43 233333455666664
|
|
| >COG0647 NagD Predicted sugar phosphatases of the HAD superfamily [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.62 E-value=2.7e-15 Score=114.11 Aligned_cols=76 Identities=26% Similarity=0.367 Sum_probs=66.4
Q ss_pred cCCCCCHHHHHHHHHHcCCCCCCCCcEEEEecCH-HHHHHHHHcCCeEEEEcCCCCCcc----cccchhhhhhhhcccCC
Q 026543 150 KQGKPSPDIFLAAAKRFEGGPIDSQEILVFEDAP-SGVLAAKNAGMSVVMVPDPRLDSS----YHSNADQLLSSLLGFNP 224 (237)
Q Consensus 150 ~~~kp~~~~~~~~l~~~~~~~~~~~~~~~igD~~-~Di~~a~~~G~~~i~v~~~~~~~~----~~~~~~~~~~~~~el~~ 224 (237)
-.+||++.+|+.++++++ .++++++||||+. +||.+|.++|+.+++|.+|..... ....++++++|+.++..
T Consensus 187 ~~GKP~~~i~~~al~~~~---~~~~~~~mVGD~~~TDI~~a~~~G~~t~LV~TGv~~~~~~~~~~~~p~~v~~sl~~~~~ 263 (269)
T COG0647 187 VIGKPSPAIYEAALEKLG---LDRSEVLMVGDRLDTDILGAKAAGLDTLLVLTGVSSAEDLDRAEVKPTYVVDSLAELIT 263 (269)
T ss_pred ccCCCCHHHHHHHHHHhC---CCcccEEEEcCCchhhHHHHHHcCCCEEEEccCCCChhhhhhhccCCcchHhhHHHHHh
Confidence 578999999999999999 9999999999999 999999999999999999988322 24678999999999876
Q ss_pred CCCC
Q 026543 225 KDWG 228 (237)
Q Consensus 225 ~l~~ 228 (237)
.+..
T Consensus 264 ~~~~ 267 (269)
T COG0647 264 ALKE 267 (269)
T ss_pred hhhc
Confidence 5543
|
|
| >PF06888 Put_Phosphatase: Putative Phosphatase; InterPro: IPR016965 This group represents phosphatases related to PHOSPHO1 and PHOSPHO2 [] | Back alignment and domain information |
|---|
Probab=99.60 E-value=7.9e-14 Score=104.26 Aligned_cols=174 Identities=13% Similarity=0.136 Sum_probs=115.3
Q ss_pred EEEEecCcccccchhhHHHHHHHHHHHcCCCCCHHHH-HHhcCCChHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHhhc
Q 026543 12 HVIFDMDGLLLDTEKFYTEVQELILARYNKTFDWSLK-AKMMGKKAIEAAQVFVEETGISDKLSAEDFLVQREETLQTLF 90 (237)
Q Consensus 12 ~vifD~DGTL~~~~~~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (237)
+|+||||+||++.+.. ..+++.++.......+ ..+......+.++.++..++..+ .+.+++.+. .
T Consensus 2 LvvfDFD~TIvd~dsd-----~~v~~~l~~~~~~~~l~~~~~~~~wt~~m~~vl~~L~~~g-vt~~~I~~~--------l 67 (234)
T PF06888_consen 2 LVVFDFDHTIVDQDSD-----DWVIELLPPEELPEELRESYPKGGWTEYMDRVLQLLHEQG-VTPEDIRDA--------L 67 (234)
T ss_pred EEEEeCCCCccCCccH-----HHHHHhcCCcccHHHHHHhccccchHHHHHHHHHHHHHcC-CCHHHHHHH--------H
Confidence 6899999999977642 2344555544332232 22222344566666666653221 334444333 3
Q ss_pred CCCCCCccHHHHHHHH--HhCCCCEEEEeCChhhHHHHHHhhhhhhhhhcceeeeCC-----C-----------C--Ccc
Q 026543 91 PTSELMPGASHLIRHL--HAKGIPMCVATGSLARHFELKTQKHRELFSLMHHVVRGD-----D-----------P--EVK 150 (237)
Q Consensus 91 ~~~~~~~~~~~~l~~l--~~~g~~v~i~s~~~~~~~~~~~~~~~gl~~~f~~~~~~~-----~-----------~--~~~ 150 (237)
..+++.||+.++++.+ ++.|+.++|+|+++.-.+. .++++.|+...|+.|++.. + . ..+
T Consensus 68 ~~ip~~pgm~~~l~~l~~~~~~~~~~IiSDaNs~fI~-~iL~~~gl~~~f~~I~TNpa~~~~~G~l~v~pyh~h~C~~C~ 146 (234)
T PF06888_consen 68 RSIPIDPGMKELLRFLAKNQRGFDLIIISDANSFFIE-TILEHHGLRDCFSEIFTNPACFDADGRLRVRPYHSHGCSLCP 146 (234)
T ss_pred HcCCCCccHHHHHHHHHhcCCCceEEEEeCCcHhHHH-HHHHhCCCccccceEEeCCceecCCceEEEeCccCCCCCcCC
Confidence 4589999999999999 4578999999997665444 6889999999998887642 0 0 001
Q ss_pred CCCCCHHHHHHHHHHc---CCCCCCCCcEEEEecCHHHHHHHHHcCCeEEEEcCCC
Q 026543 151 QGKPSPDIFLAAAKRF---EGGPIDSQEILVFEDAPSGVLAAKNAGMSVVMVPDPR 203 (237)
Q Consensus 151 ~~kp~~~~~~~~l~~~---~~~~~~~~~~~~igD~~~Di~~a~~~G~~~i~v~~~~ 203 (237)
...-|...++.+++.. | +..++++||||+.||+-.+...+-.-+..++..
T Consensus 147 ~NmCK~~il~~~~~~~~~~g---~~~~rviYiGDG~nD~Cp~~~L~~~D~v~~R~~ 199 (234)
T PF06888_consen 147 PNMCKGKILERLLQEQAQRG---VPYDRVIYIGDGRNDFCPALRLRPRDVVFPRKG 199 (234)
T ss_pred CccchHHHHHHHHHHHhhcC---CCcceEEEECCCCCCcCcccccCCCCEEecCCC
Confidence 1123566777777663 5 788999999999999999998876544444433
|
It includes plant phosphatases with homology to the haloacid dehalogenase (HAD) superfamily [, ]. PHOSPHO1 is a phosphoethanolamine/phosphocholine phosphatase [], while PHOSPHO2 has high activity toward pyridoxal 5'-phosphate (PLP), and it is active at much lower level toward pyrophosphate, phosphoethanolamine (PEA)and phosphocholine (PCho) []. ; GO: 0016791 phosphatase activity |
| >TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459 | Back alignment and domain information |
|---|
Probab=99.59 E-value=4.7e-15 Score=113.40 Aligned_cols=99 Identities=19% Similarity=0.244 Sum_probs=78.8
Q ss_pred CccHHHHHHHHHhCCCCEEEEeCChhhHHHHHHhhhhhhhhhccee--eeCCCCCccCCCCCHHHHHHHHHHcCCCCCC-
Q 026543 96 MPGASHLIRHLHAKGIPMCVATGSLARHFELKTQKHRELFSLMHHV--VRGDDPEVKQGKPSPDIFLAAAKRFEGGPID- 172 (237)
Q Consensus 96 ~~~~~~~l~~l~~~g~~v~i~s~~~~~~~~~~~~~~~gl~~~f~~~--~~~~~~~~~~~kp~~~~~~~~l~~~~~~~~~- 172 (237)
++++.++++.+.++|+++ |+||.+..... ......+...++..+ .+++ ....+||++..|..++++++ ..
T Consensus 140 ~~~~~~~l~~l~~~g~~~-i~tN~d~~~~~-~~~~~~~~g~~~~~i~~~g~~--~~~~gKP~~~~~~~~~~~~~---~~~ 212 (242)
T TIGR01459 140 LDEFDELFAPIVARKIPN-ICANPDRGINQ-HGIYRYGAGYYAELIKQLGGK--VIYSGKPYPAIFHKALKECS---NIP 212 (242)
T ss_pred HHHHHHHHHHHHhCCCcE-EEECCCEeccC-CCceEecccHHHHHHHHhCCc--EecCCCCCHHHHHHHHHHcC---CCC
Confidence 688999999998889987 88996665443 234455555566644 4555 55589999999999999998 75
Q ss_pred CCcEEEEecC-HHHHHHHHHcCCeEEEEcC
Q 026543 173 SQEILVFEDA-PSGVLAAKNAGMSVVMVPD 201 (237)
Q Consensus 173 ~~~~~~igD~-~~Di~~a~~~G~~~i~v~~ 201 (237)
+++|+||||+ .+|+.+|+++|+.+++|.+
T Consensus 213 ~~~~~~vGD~~~~Di~~a~~~G~~~i~v~t 242 (242)
T TIGR01459 213 KNRMLMVGDSFYTDILGANRLGIDTALVLT 242 (242)
T ss_pred cccEEEECCCcHHHHHHHHHCCCeEEEEeC
Confidence 5789999999 5999999999999999853
|
This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily) |
| >PF13242 Hydrolase_like: HAD-hyrolase-like; PDB: 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A 2HX1_D 2X4D_A 3HLT_C 3L1U_B | Back alignment and domain information |
|---|
Probab=99.58 E-value=4.1e-15 Score=92.43 Aligned_cols=69 Identities=26% Similarity=0.404 Sum_probs=62.2
Q ss_pred CCCCCHHHHHHHHHHcCCCCCCCCcEEEEecC-HHHHHHHHHcCCeEEEEcCCCCCccc----ccchhhhhhhhccc
Q 026543 151 QGKPSPDIFLAAAKRFEGGPIDSQEILVFEDA-PSGVLAAKNAGMSVVMVPDPRLDSSY----HSNADQLLSSLLGF 222 (237)
Q Consensus 151 ~~kp~~~~~~~~l~~~~~~~~~~~~~~~igD~-~~Di~~a~~~G~~~i~v~~~~~~~~~----~~~~~~~~~~~~el 222 (237)
++||+|.++..++++++ ++++++++|||+ ..|+++|+++|+.+++|.+|...... ...+++++++|.|+
T Consensus 2 ~gKP~p~~~~~a~~~~~---~~~~~~~~VGD~~~~Di~~a~~~G~~~ilV~tG~~~~~~~~~~~~~pd~vv~~l~e~ 75 (75)
T PF13242_consen 2 CGKPSPGMLEQALKRLG---VDPSRCVMVGDSLETDIEAAKAAGIDTILVLTGVYSPEDLEKAEHKPDYVVDDLKEA 75 (75)
T ss_dssp CSTTSHHHHHHHHHHHT---SGGGGEEEEESSTTTHHHHHHHTTSEEEEESSSSSCCCGHHHSSSTTSEEESSGGGH
T ss_pred CCCCcHHHHHHHHHHcC---CCHHHEEEEcCCcHhHHHHHHHcCCcEEEECCCCCCHHHHhccCCCCCEEECCHHhC
Confidence 57999999999999999 999999999999 79999999999999999998874432 36899999999874
|
... |
| >PHA02530 pseT polynucleotide kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.57 E-value=2.3e-14 Score=113.16 Aligned_cols=107 Identities=14% Similarity=0.088 Sum_probs=91.3
Q ss_pred CCCCccHHHHHHHHHhCCCCEEEEeCChhhHHHHHHhhhhhhhh-hcceeeeCCCC-----CccCCCCCHHHHHHHHHHc
Q 026543 93 SELMPGASHLIRHLHAKGIPMCVATGSLARHFELKTQKHRELFS-LMHHVVRGDDP-----EVKQGKPSPDIFLAAAKRF 166 (237)
Q Consensus 93 ~~~~~~~~~~l~~l~~~g~~v~i~s~~~~~~~~~~~~~~~gl~~-~f~~~~~~~~~-----~~~~~kp~~~~~~~~l~~~ 166 (237)
..++|++.++++.|+++|++++++||..... ....++.+++.. +|+.+++.+.. +....||+|..+..+++++
T Consensus 186 ~~~~~~~~~~l~~l~~~g~~i~i~T~r~~~~-~~~~l~~l~~~~~~f~~i~~~~~~~~~~~~~~~~kp~p~~~~~~l~~~ 264 (300)
T PHA02530 186 DKPNPMVVELVKMYKAAGYEIIVVSGRDGVC-EEDTVEWLRQTDIWFDDLIGRPPDMHFQREQGDKRPDDVVKEEIFWEK 264 (300)
T ss_pred CCCChhHHHHHHHHHhCCCEEEEEeCCChhh-HHHHHHHHHHcCCchhhhhCCcchhhhcccCCCCCCcHHHHHHHHHHH
Confidence 4688999999999999999999999966654 446788888886 89988877610 1335799999999999999
Q ss_pred CCCCC-CCCcEEEEecCHHHHHHHHHcCCeEEEEcCCC
Q 026543 167 EGGPI-DSQEILVFEDAPSGVLAAKNAGMSVVMVPDPR 203 (237)
Q Consensus 167 ~~~~~-~~~~~~~igD~~~Di~~a~~~G~~~i~v~~~~ 203 (237)
+ . ++++|++|||+.+|+++|+++|+.+++|.+|.
T Consensus 265 ~---~~~~~~~~~vgD~~~d~~~a~~~Gi~~i~v~~g~ 299 (300)
T PHA02530 265 I---APKYDVLLAVDDRDQVVDMWRRIGLECWQVAPGD 299 (300)
T ss_pred h---ccCceEEEEEcCcHHHHHHHHHhCCeEEEecCCC
Confidence 8 8 67999999999999999999999999998764
|
|
| >PRK08238 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=99.55 E-value=1.6e-13 Score=113.47 Aligned_cols=98 Identities=16% Similarity=0.116 Sum_probs=75.6
Q ss_pred CCCCccHHHHHHHHHhCCCCEEEEeCChhhHHHHHHhhhhhhhhhcceeeeCCCCCccCCCCCHHHHHHHHHHcCCCCCC
Q 026543 93 SELMPGASHLIRHLHAKGIPMCVATGSLARHFELKTQKHRELFSLMHHVVRGDDPEVKQGKPSPDIFLAAAKRFEGGPID 172 (237)
Q Consensus 93 ~~~~~~~~~~l~~l~~~g~~v~i~s~~~~~~~~~~~~~~~gl~~~f~~~~~~~~~~~~~~kp~~~~~~~~l~~~~~~~~~ 172 (237)
.+..|++.++++.++++|++++++|++...... .+.+++|+ ||.+++++ +....||++.. ..+.+.++
T Consensus 71 lp~~pga~e~L~~lk~~G~~v~LaTas~~~~a~-~i~~~lGl---Fd~Vigsd--~~~~~kg~~K~-~~l~~~l~----- 138 (479)
T PRK08238 71 LPYNEEVLDYLRAERAAGRKLVLATASDERLAQ-AVAAHLGL---FDGVFASD--GTTNLKGAAKA-AALVEAFG----- 138 (479)
T ss_pred CCCChhHHHHHHHHHHCCCEEEEEeCCCHHHHH-HHHHHcCC---CCEEEeCC--CccccCCchHH-HHHHHHhC-----
Confidence 568899999999999999999999997665444 56777776 89999998 55555555432 33445555
Q ss_pred CCcEEEEecCHHHHHHHHHcCCeEEEEcCCC
Q 026543 173 SQEILVFEDAPSGVLAAKNAGMSVVMVPDPR 203 (237)
Q Consensus 173 ~~~~~~igD~~~Di~~a~~~G~~~i~v~~~~ 203 (237)
.++++++||+.+|+++++.+| ..+.|+.+.
T Consensus 139 ~~~~~yvGDS~~Dlp~~~~A~-~av~Vn~~~ 168 (479)
T PRK08238 139 ERGFDYAGNSAADLPVWAAAR-RAIVVGASP 168 (479)
T ss_pred ccCeeEecCCHHHHHHHHhCC-CeEEECCCH
Confidence 356899999999999999999 556676544
|
|
| >TIGR01456 CECR5 HAD-superfamily class IIA hydrolase, TIGR01456, CECR5 | Back alignment and domain information |
|---|
Probab=99.54 E-value=2.4e-14 Score=113.64 Aligned_cols=77 Identities=16% Similarity=0.203 Sum_probs=60.0
Q ss_pred cCCCCCHHHHHHHHHHc--------CCC--CCCCCcEEEEecCH-HHHHHHHHcCCeEEEEcCCCCCcc---cccchhhh
Q 026543 150 KQGKPSPDIFLAAAKRF--------EGG--PIDSQEILVFEDAP-SGVLAAKNAGMSVVMVPDPRLDSS---YHSNADQL 215 (237)
Q Consensus 150 ~~~kp~~~~~~~~l~~~--------~~~--~~~~~~~~~igD~~-~Di~~a~~~G~~~i~v~~~~~~~~---~~~~~~~~ 215 (237)
..+||++..|+.+++.+ +.. ..++++++||||++ +||.+|+++||.+++|.+|..... ....++++
T Consensus 230 ~~GKP~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~mIGD~~~tDI~ga~~~G~~silV~tG~~~~~~~~~~~~p~~v 309 (321)
T TIGR01456 230 TLGKPTKLTYDFAEDVLIDWEKRLSGTKPSTSPFHALYMVGDNPASDIIGAQNYGWFSCLVKTGVYNGGDDLKECKPTLI 309 (321)
T ss_pred EcCCCChHHHHHHHHHHHHHHhhhccccccCCChheEEEEcCChhhhhhhHHhCCceEEEecccccCCCCCCCCCCCCEE
Confidence 45999999999988887 300 02457999999998 999999999999999998754221 13458899
Q ss_pred hhhhcccCCCC
Q 026543 216 LSSLLGFNPKD 226 (237)
Q Consensus 216 ~~~~~el~~~l 226 (237)
++|+.|+...+
T Consensus 310 v~~l~e~~~~i 320 (321)
T TIGR01456 310 VNDVFDAVTKI 320 (321)
T ss_pred ECCHHHHHHHh
Confidence 99999886544
|
The Schizosaccharomyces pombe sequence (EGAD|138276) is annotated as "phosphatidyl synthase," however this is due entirely to a C-terminal region of the protein (outside the region of similarity of this model) which is highly homologous to a family of CDP-alcohol phosphatidyltransferases. (Thus, the annotation of GP|4226073 from C. elegans as similar to phosphatidyl synthase, is a mistake as this gene does not contain the C-terminal portion). The physical connection of the phosphatidyl synthase and the HAD-superfamily hydrolase domain in S. pombe may, however, be an important clue to the substrate for the hydrolases in this equivalog. |
| >TIGR01460 HAD-SF-IIA Haloacid Dehalogenase Superfamily Class (subfamily) IIA | Back alignment and domain information |
|---|
Probab=99.54 E-value=6.2e-14 Score=106.66 Aligned_cols=50 Identities=32% Similarity=0.495 Sum_probs=46.2
Q ss_pred cCCCCCHHHHHHHHHHcCCCCCCCCcE-EEEecCH-HHHHHHHHcCCeEEEEcCC
Q 026543 150 KQGKPSPDIFLAAAKRFEGGPIDSQEI-LVFEDAP-SGVLAAKNAGMSVVMVPDP 202 (237)
Q Consensus 150 ~~~kp~~~~~~~~l~~~~~~~~~~~~~-~~igD~~-~Di~~a~~~G~~~i~v~~~ 202 (237)
..+||++..|+.++++++ ++++++ +||||+. +|+.+|+++|+++++|.+|
T Consensus 185 ~~~KP~~~~~~~~~~~~~---~~~~~~~~~IGD~~~~Di~~A~~~G~~~i~v~~G 236 (236)
T TIGR01460 185 VVGKPSPAIYRAALNLLQ---ARPERRDVMVGDNLRTDILGAKNAGFDTLLVLTG 236 (236)
T ss_pred eecCCCHHHHHHHHHHhC---CCCccceEEECCCcHHHHHHHHHCCCcEEEEecC
Confidence 367999999999999999 998887 9999998 8999999999999999764
|
Many of the genes in this subfamily have been annotated as "pNPPase" "4-nitrophenyl phosphatase" or "NPPase". These all refer to the same activity versus a common lab test compound used to determine phosphatase activity. There is no evidence that this activity is physiologically relevant. |
| >COG0241 HisB Histidinol phosphatase and related phosphatases [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.53 E-value=4.1e-13 Score=95.82 Aligned_cols=128 Identities=23% Similarity=0.273 Sum_probs=91.1
Q ss_pred CCCCccHHHHHHHHHhCCCCEEEEeCChh---hH--------HHHHHhhhh-hhhhhcceeeeCC-CC--CccCCCCCHH
Q 026543 93 SELMPGASHLIRHLHAKGIPMCVATGSLA---RH--------FELKTQKHR-ELFSLMHHVVRGD-DP--EVKQGKPSPD 157 (237)
Q Consensus 93 ~~~~~~~~~~l~~l~~~g~~v~i~s~~~~---~~--------~~~~~~~~~-gl~~~f~~~~~~~-~~--~~~~~kp~~~ 157 (237)
..+.+|+.+.+..+++.|++++++||-+. .+ .+..+++.+ .....|+.++... .+ ...+.||++.
T Consensus 30 ~~~~~g~i~al~~l~~~gy~lVvvTNQsGi~rgyf~~~~f~~~~~~m~~~l~~~gv~id~i~~Cph~p~~~c~cRKP~~g 109 (181)
T COG0241 30 FQFIPGVIPALLKLQRAGYKLVVVTNQSGIGRGYFTEADFDKLHNKMLKILASQGVKIDGILYCPHHPEDNCDCRKPKPG 109 (181)
T ss_pred hccCccHHHHHHHHHhCCCeEEEEECCCCccccCccHHHHHHHHHHHHHHHHHcCCccceEEECCCCCCCCCcccCCChH
Confidence 45889999999999999999999999211 01 111111111 1112466665543 11 2568999999
Q ss_pred HHHHHHHHcCCCCCCCCcEEEEecCHHHHHHHHHcCCeEEEEcCCCCC-cccccchhhhhhhhcccC
Q 026543 158 IFLAAAKRFEGGPIDSQEILVFEDAPSGVLAAKNAGMSVVMVPDPRLD-SSYHSNADQLLSSLLGFN 223 (237)
Q Consensus 158 ~~~~~l~~~~~~~~~~~~~~~igD~~~Di~~a~~~G~~~i~v~~~~~~-~~~~~~~~~~~~~~~el~ 223 (237)
++..++++++ +++.+.++|||+.+|+++|.++|++.+.+.++... .......+++.+++.++.
T Consensus 110 m~~~~~~~~~---iD~~~s~~VGD~~~Dlq~a~n~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (181)
T COG0241 110 MLLSALKEYN---IDLSRSYVVGDRLTDLQAAENAGIKGVLVLTGIGVTTDGAGRAKWVFDSLAEFA 173 (181)
T ss_pred HHHHHHHHhC---CCccceEEecCcHHHHHHHHHCCCCceEEEcCcccccccccccccccccHHHHH
Confidence 9999999999 99999999999999999999999998888776552 122224566666666654
|
|
| >TIGR01686 FkbH FkbH-like domain | Back alignment and domain information |
|---|
Probab=99.52 E-value=6.7e-14 Score=111.16 Aligned_cols=90 Identities=14% Similarity=0.133 Sum_probs=78.5
Q ss_pred CCccHHHHHHHHHhCCCCEEEEeCChhhHHHHHHhhh----hhhhhhcceeeeCCCCCccCCCCCHHHHHHHHHHcCCCC
Q 026543 95 LMPGASHLIRHLHAKGIPMCVATGSLARHFELKTQKH----RELFSLMHHVVRGDDPEVKQGKPSPDIFLAAAKRFEGGP 170 (237)
Q Consensus 95 ~~~~~~~~l~~l~~~g~~v~i~s~~~~~~~~~~~~~~----~gl~~~f~~~~~~~~~~~~~~kp~~~~~~~~l~~~~~~~ 170 (237)
+++++.++|..|+++|+.++|+|++...... ..++. +++.++|+.+..+ .||++..+..+++++|
T Consensus 32 ~~~~~~e~L~~L~~~Gi~lai~S~n~~~~a~-~~l~~~~~~~~~~~~f~~~~~~-------~~pk~~~i~~~~~~l~--- 100 (320)
T TIGR01686 32 LHKTLQEKIKTLKKQGFLLALASKNDEDDAK-KVFERRKDFILQAEDFDARSIN-------WGPKSESLRKIAKKLN--- 100 (320)
T ss_pred cHHHHHHHHHHHHhCCCEEEEEcCCCHHHHH-HHHHhCccccCcHHHeeEEEEe-------cCchHHHHHHHHHHhC---
Confidence 5889999999999999999999997765544 45666 7888889887544 3799999999999999
Q ss_pred CCCCcEEEEecCHHHHHHHHHcCCe
Q 026543 171 IDSQEILVFEDAPSGVLAAKNAGMS 195 (237)
Q Consensus 171 ~~~~~~~~igD~~~Di~~a~~~G~~ 195 (237)
+.+++++||||++.|+.+++.++..
T Consensus 101 i~~~~~vfidD~~~d~~~~~~~lp~ 125 (320)
T TIGR01686 101 LGTDSFLFIDDNPAERANVKITLPV 125 (320)
T ss_pred CCcCcEEEECCCHHHHHHHHHHCCC
Confidence 9999999999999999999998754
|
The C-terminal portion of this domain is unique to this family (by BLAST). |
| >smart00577 CPDc catalytic domain of ctd-like phosphatases | Back alignment and domain information |
|---|
Probab=99.50 E-value=2.9e-14 Score=100.61 Aligned_cols=94 Identities=12% Similarity=0.105 Sum_probs=81.1
Q ss_pred CCCCCccHHHHHHHHHhCCCCEEEEeCChhhHHHHHHhhhhhhhh-hcceeeeCCCCCccCCCCCHHHHHHHHHHcCCCC
Q 026543 92 TSELMPGASHLIRHLHAKGIPMCVATGSLARHFELKTQKHRELFS-LMHHVVRGDDPEVKQGKPSPDIFLAAAKRFEGGP 170 (237)
Q Consensus 92 ~~~~~~~~~~~l~~l~~~g~~v~i~s~~~~~~~~~~~~~~~gl~~-~f~~~~~~~~~~~~~~kp~~~~~~~~l~~~~~~~ 170 (237)
.+.++||+.++|..|++ +++++|+|++....+. .+++.+++.. +|+.+++++ +....||. |.+.+++++
T Consensus 43 ~v~l~pG~~e~L~~L~~-~~~l~I~Ts~~~~~~~-~il~~l~~~~~~f~~i~~~~--d~~~~KP~---~~k~l~~l~--- 112 (148)
T smart00577 43 YVKKRPGVDEFLKRASE-LFELVVFTAGLRMYAD-PVLDLLDPKKYFGYRRLFRD--ECVFVKGK---YVKDLSLLG--- 112 (148)
T ss_pred EEEECCCHHHHHHHHHh-ccEEEEEeCCcHHHHH-HHHHHhCcCCCEeeeEEECc--cccccCCe---EeecHHHcC---
Confidence 36789999999999984 6999999998877666 4677778755 469999998 77778886 899999999
Q ss_pred CCCCcEEEEecCHHHHHHHHHcCCe
Q 026543 171 IDSQEILVFEDAPSGVLAAKNAGMS 195 (237)
Q Consensus 171 ~~~~~~~~igD~~~Di~~a~~~G~~ 195 (237)
.+|++|++|||+.+|++++.++|+.
T Consensus 113 ~~p~~~i~i~Ds~~~~~aa~~ngI~ 137 (148)
T smart00577 113 RDLSNVIIIDDSPDSWPFHPENLIP 137 (148)
T ss_pred CChhcEEEEECCHHHhhcCccCEEE
Confidence 9999999999999999999999944
|
|
| >TIGR01544 HAD-SF-IE haloacid dehalogenase superfamily, subfamily IE hydrolase, TIGR01544 | Back alignment and domain information |
|---|
Probab=99.50 E-value=7.2e-13 Score=101.25 Aligned_cols=97 Identities=19% Similarity=0.326 Sum_probs=73.8
Q ss_pred CCCCCccHHHHHHHHHhCCCCEEEEeCChhhHHHHHHhhhhhhhhhccee------eeCCCCCccCCCCCH---------
Q 026543 92 TSELMPGASHLIRHLHAKGIPMCVATGSLARHFELKTQKHRELFSLMHHV------VRGDDPEVKQGKPSP--------- 156 (237)
Q Consensus 92 ~~~~~~~~~~~l~~l~~~g~~v~i~s~~~~~~~~~~~~~~~gl~~~f~~~------~~~~~~~~~~~kp~~--------- 156 (237)
.+.+.||+.++++.|+++|++++|+|++....+. ..++..|+...+..+ +..+ ....++|.|
T Consensus 119 ~l~l~pG~~efl~~L~~~GIpv~IvS~G~~~~Ie-~vL~~lgl~~~~~~IvSN~L~f~~d--GvltG~~~P~i~~~~K~~ 195 (277)
T TIGR01544 119 DVMLKDGYENFFDKLQQHSIPVFIFSAGIGNVLE-EVLRQAGVYHPNVKVVSNFMDFDED--GVLKGFKGPLIHTFNKNH 195 (277)
T ss_pred CCccCcCHHHHHHHHHHCCCcEEEEeCCcHHHHH-HHHHHcCCCCcCceEEeeeEEECCC--CeEeCCCCCcccccccHH
Confidence 5889999999999999999999999998876555 567767776556566 3333 333455555
Q ss_pred HHHHHHHHHcCCCCCCCCcEEEEecCHHHHHHHHHc
Q 026543 157 DIFLAAAKRFEGGPIDSQEILVFEDAPSGVLAAKNA 192 (237)
Q Consensus 157 ~~~~~~l~~~~~~~~~~~~~~~igD~~~Di~~a~~~ 192 (237)
..++...+.++. ..++++|++|||+.+|+.||.-+
T Consensus 196 ~v~~~~~~~~~~-~~~~~~vI~vGDs~~Dl~ma~g~ 230 (277)
T TIGR01544 196 DVALRNTEYFNQ-LKDRSNIILLGDSQGDLRMADGV 230 (277)
T ss_pred HHHHHHHHHhCc-cCCcceEEEECcChhhhhHhcCC
Confidence 556567777752 15789999999999999998766
|
This group of sequences was found during searches for members of the haloacid dehalogenase (HAD) superfamily. All of the conserved catalytic motifs are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches (IA, TIGR01493, TIGR01509, TIGR01549; IB, TIGR01488; IC, TIGR01494; ID, TIGR01658; IF TIGR01545) of that subfamily as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB. |
| >PRK01158 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.50 E-value=1.1e-14 Score=110.60 Aligned_cols=65 Identities=18% Similarity=0.184 Sum_probs=53.2
Q ss_pred ccCCCCCHHHHHHHHHHcCCCCCCCCcEEEEecCHHHHHHHHHcCCeEEEEcCCCCCcccccchhhhhhhh
Q 026543 149 VKQGKPSPDIFLAAAKRFEGGPIDSQEILVFEDAPSGVLAAKNAGMSVVMVPDPRLDSSYHSNADQLLSSL 219 (237)
Q Consensus 149 ~~~~kp~~~~~~~~l~~~~~~~~~~~~~~~igD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~~~ 219 (237)
...+..|+.++++++++++ ++++++++|||+.||++|++.+|+. |..++..+..+..+++++.+.
T Consensus 152 ~~~~~~Kg~al~~l~~~~~---i~~~~~i~~GD~~NDi~m~~~ag~~---vam~Na~~~vk~~a~~v~~~n 216 (230)
T PRK01158 152 KSPGVNKGTGLKKLAELMG---IDPEEVAAIGDSENDLEMFEVAGFG---VAVANADEELKEAADYVTEKS 216 (230)
T ss_pred eeCCCChHHHHHHHHHHhC---CCHHHEEEECCchhhHHHHHhcCce---EEecCccHHHHHhcceEecCC
Confidence 3456678999999999999 9999999999999999999999954 555667666667777776553
|
|
| >PF12689 Acid_PPase: Acid Phosphatase; InterPro: IPR010036 This entry represents two closely related clades of sequences from eukaryotes and archaea | Back alignment and domain information |
|---|
Probab=99.49 E-value=8.1e-14 Score=98.99 Aligned_cols=103 Identities=19% Similarity=0.327 Sum_probs=73.7
Q ss_pred CCCCCccHHHHHHHHHhCCCCEEEEeCChhhHHHHHHhhhhhhh----------hhcceeeeCCCCCccCCCCCHHHHHH
Q 026543 92 TSELMPGASHLIRHLHAKGIPMCVATGSLARHFELKTQKHRELF----------SLMHHVVRGDDPEVKQGKPSPDIFLA 161 (237)
Q Consensus 92 ~~~~~~~~~~~l~~l~~~g~~v~i~s~~~~~~~~~~~~~~~gl~----------~~f~~~~~~~~~~~~~~kp~~~~~~~ 161 (237)
.+.++|++.++|+.|+.+|++++++|-.+.......+++.+++. ++|+..--+. + .+...++.
T Consensus 43 ~v~lypdv~~iL~~L~~~gv~lavASRt~~P~~A~~~L~~l~i~~~~~~~~~~~~~F~~~eI~~------g-sK~~Hf~~ 115 (169)
T PF12689_consen 43 EVSLYPDVPEILQELKERGVKLAVASRTDEPDWARELLKLLEIDDADGDGVPLIEYFDYLEIYP------G-SKTTHFRR 115 (169)
T ss_dssp EE---TTHHHHHHHHHHCT--EEEEE--S-HHHHHHHHHHTT-C----------CCECEEEESS------S--HHHHHHH
T ss_pred EEEeCcCHHHHHHHHHHCCCEEEEEECCCChHHHHHHHHhcCCCccccccccchhhcchhheec------C-chHHHHHH
Confidence 47899999999999999999999999766666777889988888 7776643222 2 56889999
Q ss_pred HHHHcCCCCCCCCcEEEEecCHHHHHHHHHcCCeEEEEcCCCC
Q 026543 162 AAKRFEGGPIDSQEILVFEDAPSGVLAAKNAGMSVVMVPDPRL 204 (237)
Q Consensus 162 ~l~~~~~~~~~~~~~~~igD~~~Di~~a~~~G~~~i~v~~~~~ 204 (237)
+.++.| +++++++||+|...+++.....|+.++.|..|..
T Consensus 116 i~~~tg---I~y~eMlFFDDe~~N~~~v~~lGV~~v~v~~Glt 155 (169)
T PF12689_consen 116 IHRKTG---IPYEEMLFFDDESRNIEVVSKLGVTCVLVPDGLT 155 (169)
T ss_dssp HHHHH------GGGEEEEES-HHHHHHHHTTT-EEEE-SSS--
T ss_pred HHHhcC---CChhHEEEecCchhcceeeEecCcEEEEeCCCCC
Confidence 999999 9999999999999999999999999999998766
|
The mouse enzyme has been characterised as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues [, ].; GO: 0016791 phosphatase activity; PDB: 1U7P_A 1U7O_A 2WM8_A. |
| >KOG1615 consensus Phosphoserine phosphatase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.49 E-value=3.4e-13 Score=95.15 Aligned_cols=192 Identities=15% Similarity=0.171 Sum_probs=113.3
Q ss_pred CccEEEEecCcccccchhhHHHHHHHHHHHcCCCC--CHHHHHHhcCC-ChHHHHHHHHHHhCCCCCCCHHHHHHHHHHH
Q 026543 9 PITHVIFDMDGLLLDTEKFYTEVQELILARYNKTF--DWSLKAKMMGK-KAIEAAQVFVEETGISDKLSAEDFLVQREET 85 (237)
Q Consensus 9 ~~~~vifD~DGTL~~~~~~~~~~~~~~~~~~g~~~--~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (237)
.-++|+||+|-|++..+. +..+.+..|... ...+.+.+.|. +..+.++.-+.-+.. ...+.. .+
T Consensus 15 ~~~aVcFDvDSTvi~eEg-----IdelA~~~G~~~~Va~~T~rAMng~~~F~eaL~~Rl~llqp----~~~qv~----~~ 81 (227)
T KOG1615|consen 15 SADAVCFDVDSTVIQEEG-----IDELAAYCGVGEAVAEVTRRAMNGEADFQEALAARLSLLQP----LQVQVE----QF 81 (227)
T ss_pred hcCeEEEecCcchhHHhh-----HHHHHHHhCchHHHHHHHHHHhCCCCcHHHHHHHHHHHhcc----cHHHHH----HH
Confidence 358999999999997663 344444444421 11222222221 222222222221110 111111 11
Q ss_pred HHhhcCCCCCCccHHHHHHHHHhCCCCEEEEeCChhhHHHHHHhhhhhhhh--hc--------ceeeeCCCC--CccCCC
Q 026543 86 LQTLFPTSELMPGASHLIRHLHAKGIPMCVATGSLARHFELKTQKHRELFS--LM--------HHVVRGDDP--EVKQGK 153 (237)
Q Consensus 86 ~~~~~~~~~~~~~~~~~l~~l~~~g~~v~i~s~~~~~~~~~~~~~~~gl~~--~f--------~~~~~~~~~--~~~~~k 153 (237)
. ....+++.||+++++..|+++|.+++++|++....+. .....+|+.. .+ ++-+.+.+. ....+-
T Consensus 82 v--~~~k~~lT~Gi~eLv~~L~~~~~~v~liSGGF~~~i~-~Va~~Lgi~~~n~yAN~l~fd~~Gk~~gfd~~~ptsdsg 158 (227)
T KOG1615|consen 82 V--IKQKPTLTPGIRELVSRLHARGTQVYLISGGFRQLIE-PVAEQLGIPKSNIYANELLFDKDGKYLGFDTNEPTSDSG 158 (227)
T ss_pred H--hcCCCccCCCHHHHHHHHHHcCCeEEEEcCChHHHHH-HHHHHhCCcHhhhhhheeeeccCCcccccccCCccccCC
Confidence 1 1234789999999999999999999999998887555 4566677654 22 222222110 111222
Q ss_pred CCHHHHHHHHHHcCCCCCCCCcEEEEecCHHHHHHHHHcCCeEEEEcCCCC--CcccccchhhhhhhhcccCC
Q 026543 154 PSPDIFLAAAKRFEGGPIDSQEILVFEDAPSGVLAAKNAGMSVVMVPDPRL--DSSYHSNADQLLSSLLGFNP 224 (237)
Q Consensus 154 p~~~~~~~~l~~~~~~~~~~~~~~~igD~~~Di~~a~~~G~~~i~v~~~~~--~~~~~~~~~~~~~~~~el~~ 224 (237)
-+++.+..+.+ + .+.+.++||||+.+|+++...+. .++..+.. .+..+..+.+.+++|..|.-
T Consensus 159 gKa~~i~~lrk--~---~~~~~~~mvGDGatDlea~~pa~---afi~~~g~~~r~~vk~nak~~~~~f~~L~~ 223 (227)
T KOG1615|consen 159 GKAEVIALLRK--N---YNYKTIVMVGDGATDLEAMPPAD---AFIGFGGNVIREGVKANAKWYVTDFYVLGG 223 (227)
T ss_pred ccHHHHHHHHh--C---CChheeEEecCCccccccCCchh---hhhccCCceEcHhhHhccHHHHHHHHHHcc
Confidence 35667777766 7 78999999999999999988733 33333333 44457788899988887743
|
|
| >TIGR01545 YfhB_g-proteo haloacid dehalogenase superfamily, subfamily IF hydrolase, YfhB | Back alignment and domain information |
|---|
Probab=99.48 E-value=2.5e-12 Score=95.90 Aligned_cols=121 Identities=6% Similarity=-0.033 Sum_probs=74.8
Q ss_pred CCHHHHHHHHHHHHHhhcCCCCCCccHHHHHH-HHHhCCCCEEEEeCChhhHHHHHHhhhhhhhhhcceeeeCC----CC
Q 026543 73 LSAEDFLVQREETLQTLFPTSELMPGASHLIR-HLHAKGIPMCVATGSLARHFELKTQKHRELFSLMHHVVRGD----DP 147 (237)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~l~~~g~~v~i~s~~~~~~~~~~~~~~~gl~~~f~~~~~~~----~~ 147 (237)
.+.+++.+..+.+.+.......++|++.++|+ .++++|++++|+||+.... ...+.+..++... +.+++.+ +.
T Consensus 73 ~~~~~l~~~~~~f~~~~~~~~~l~pga~e~L~~~l~~~G~~v~IvSas~~~~-~~~ia~~~~~~~~-~~~i~t~le~~~g 150 (210)
T TIGR01545 73 HREAHLQDLEADFVAAFRDKVTAFPLVAERLRQYLESSDADIWLITGSPQPL-VEAVYFDSNFIHR-LNLIASQIERGNG 150 (210)
T ss_pred CCHHHHHHHHHHHHHHHHHhCCCCccHHHHHHHHHHhCCCEEEEEcCCcHHH-HHHHHHhcccccc-CcEEEEEeEEeCC
Confidence 44666666666655554444568999999996 7888999999999965544 4456655443222 2333332 00
Q ss_pred -C-ccCCCCCHHHHHHHHHHcCCCCCCCCcEEEEecCHHHHHHHHHcCCeEEE
Q 026543 148 -E-VKQGKPSPDIFLAAAKRFEGGPIDSQEILVFEDAPSGVLAAKNAGMSVVM 198 (237)
Q Consensus 148 -~-~~~~kp~~~~~~~~l~~~~~~~~~~~~~~~igD~~~Di~~a~~~G~~~i~ 198 (237)
. .+..---.+-...+-+.++ .+.+.+.+.|||.+|+++...+|-+.+.
T Consensus 151 g~~~g~~c~g~~Kv~rl~~~~~---~~~~~~~aYsDS~~D~pmL~~a~~~~~V 200 (210)
T TIGR01545 151 GWVLPLRCLGHEKVAQLEQKIG---SPLKLYSGYSDSKQDNPLLAFCEHRWRV 200 (210)
T ss_pred ceEcCccCCChHHHHHHHHHhC---CChhheEEecCCcccHHHHHhCCCcEEE
Confidence 0 0000001122333444456 5677889999999999999999977543
|
The gene name comes from the E. coli gene. There is currently no information regarding the function of this gene. |
| >TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit | Back alignment and domain information |
|---|
Probab=99.48 E-value=6.9e-14 Score=100.10 Aligned_cols=98 Identities=12% Similarity=0.120 Sum_probs=76.2
Q ss_pred HHHHHHhCCCCEEEEeCChhhHHHHHHhhhhhhhhhcceeeeCCCCCccCCCCCHHHHHHHHHHcCCCCCCCCcEEEEec
Q 026543 102 LIRHLHAKGIPMCVATGSLARHFELKTQKHRELFSLMHHVVRGDDPEVKQGKPSPDIFLAAAKRFEGGPIDSQEILVFED 181 (237)
Q Consensus 102 ~l~~l~~~g~~v~i~s~~~~~~~~~~~~~~~gl~~~f~~~~~~~~~~~~~~kp~~~~~~~~l~~~~~~~~~~~~~~~igD 181 (237)
-+..|+++|++++|+||....... ..++.+|+..+|+. .||+|..+..++++++ ++++++++|||
T Consensus 42 ~~~~L~~~Gi~laIiT~k~~~~~~-~~l~~lgi~~~f~~-----------~kpkp~~~~~~~~~l~---~~~~ev~~iGD 106 (169)
T TIGR02726 42 GVIVLQLCGIDVAIITSKKSGAVR-HRAEELKIKRFHEG-----------IKKKTEPYAQMLEEMN---ISDAEVCYVGD 106 (169)
T ss_pred HHHHHHHCCCEEEEEECCCcHHHH-HHHHHCCCcEEEec-----------CCCCHHHHHHHHHHcC---cCHHHEEEECC
Confidence 346678889999999996665544 57888888766652 1688999999999999 99999999999
Q ss_pred CHHHHHHHHHcCCeEEEEcCCCCCcccccchhhhhh
Q 026543 182 APSGVLAAKNAGMSVVMVPDPRLDSSYHSNADQLLS 217 (237)
Q Consensus 182 ~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~ 217 (237)
+.||+++++.+|+.. ...+..+..+..+++++.
T Consensus 107 ~~nDi~~~~~ag~~~---am~nA~~~lk~~A~~I~~ 139 (169)
T TIGR02726 107 DLVDLSMMKRVGLAV---AVGDAVADVKEAAAYVTT 139 (169)
T ss_pred CHHHHHHHHHCCCeE---ECcCchHHHHHhCCEEcC
Confidence 999999999999654 444554444555555543
|
Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases. |
| >TIGR02244 HAD-IG-Ncltidse HAD superfamily (subfamily IG) hydrolase, 5'-nucleotidase | Back alignment and domain information |
|---|
Probab=99.48 E-value=1.4e-11 Score=97.19 Aligned_cols=107 Identities=16% Similarity=0.093 Sum_probs=83.8
Q ss_pred CCCCCccHHHHHHHHHhCCCCEEEEeCChhhHHHHHHhhhh-h-------hhhhcceeeeCCC---------------CC
Q 026543 92 TSELMPGASHLIRHLHAKGIPMCVATGSLARHFELKTQKHR-E-------LFSLMHHVVRGDD---------------PE 148 (237)
Q Consensus 92 ~~~~~~~~~~~l~~l~~~g~~v~i~s~~~~~~~~~~~~~~~-g-------l~~~f~~~~~~~~---------------~~ 148 (237)
.+...||+.++|+.|+++|++++|+||+....+. .+++.+ | +.++||.++++.. ..
T Consensus 182 yv~~~pgl~elL~~Lr~~G~klfLvTNS~~~yt~-~im~~l~g~~~~~~~w~~yFD~IIt~a~KP~FF~~~~pf~~v~~~ 260 (343)
T TIGR02244 182 YVLRDPKLPLFLSKLKEHGKKLFLLTNSDYDYTD-KGMKYLLGPFLGEHDWRDYFDVVIVDARKPGFFTEGRPFRQVDVE 260 (343)
T ss_pred HhccchhHHHHHHHHHHCCCeEEEEeCCCHHHHH-HHHHHhhCCcccccchHhhCcEEEeCCCCCcccCCCCceEEEeCC
Confidence 3677999999999999999999999997776655 456664 6 8999999987651 00
Q ss_pred ccCCCCCH------------HHHHHHHHHcCCCCCCCCcEEEEecCH-HHHHHHH-HcCCeEEEEcCC
Q 026543 149 VKQGKPSP------------DIFLAAAKRFEGGPIDSQEILVFEDAP-SGVLAAK-NAGMSVVMVPDP 202 (237)
Q Consensus 149 ~~~~kp~~------------~~~~~~l~~~~~~~~~~~~~~~igD~~-~Di~~a~-~~G~~~i~v~~~ 202 (237)
.+..++.. .....+.+.++ +++++++||||+. .|+..++ .+||.+++|...
T Consensus 261 ~g~~~~~~~~~l~~g~vY~gGn~~~~~~~l~---~~~~~vlYvGD~i~~Di~~~kk~~Gw~TvlI~pE 325 (343)
T TIGR02244 261 TGSLKWGEVDGLEPGKVYSGGSLKQFHELLK---WRGKEVLYFGDHIYGDLLRSKKKRGWRTAAIIPE 325 (343)
T ss_pred CCcccCCccccccCCCeEeCCCHHHHHHHHC---CCCCcEEEECCcchHHHHhhHHhcCcEEEEEchh
Confidence 11111111 22567888899 9999999999999 9999998 899999999763
|
A TIGRFAMs model (TIGR01993) represents a (putative) family of _pyrimidine_ 5'-nucleotidases which are also subfamily I HAD's, which should not be confused with the current model. |
| >TIGR01663 PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase | Back alignment and domain information |
|---|
Probab=99.44 E-value=1.2e-12 Score=108.88 Aligned_cols=96 Identities=15% Similarity=0.157 Sum_probs=76.5
Q ss_pred CCccHHHHHHHHHhCCCCEEEEeCChhh-----------HHHHHHhhhhhhhhhcceeeeCCCCCccCCCCCHHHHHHHH
Q 026543 95 LMPGASHLIRHLHAKGIPMCVATGSLAR-----------HFELKTQKHRELFSLMHHVVRGDDPEVKQGKPSPDIFLAAA 163 (237)
Q Consensus 95 ~~~~~~~~l~~l~~~g~~v~i~s~~~~~-----------~~~~~~~~~~gl~~~f~~~~~~~~~~~~~~kp~~~~~~~~l 163 (237)
++||+.+.|+.|+++|++++|+||-..- .....+++.+|+. |+.+++.+ .....||++.++..++
T Consensus 198 l~pgV~e~L~~L~~~Gy~IvIvTNQ~gI~~G~~~~~~~~~ki~~iL~~lgip--fdviia~~--~~~~RKP~pGm~~~a~ 273 (526)
T TIGR01663 198 IFPEIPEKLKELEADGFKICIFTNQGGIARGKINADDFKAKIEAIVAKLGVP--FQVFIAIG--AGFYRKPLTGMWDHLK 273 (526)
T ss_pred cccCHHHHHHHHHHCCCEEEEEECCcccccCcccHHHHHHHHHHHHHHcCCc--eEEEEeCC--CCCCCCCCHHHHHHHH
Confidence 6899999999999999999999995441 1123456666663 88888777 6678899999999999
Q ss_pred HHcCC-CCCCCCcEEEEecCHHHHHHHHHcCC
Q 026543 164 KRFEG-GPIDSQEILVFEDAPSGVLAAKNAGM 194 (237)
Q Consensus 164 ~~~~~-~~~~~~~~~~igD~~~Di~~a~~~G~ 194 (237)
++++. ..+++++++||||+..|+++++.+|-
T Consensus 274 ~~~~~~~~Id~~~S~~VGDaagr~~~g~~ag~ 305 (526)
T TIGR01663 274 EEANDGTEIQEDDCFFVGDAAGRPANGKAAGK 305 (526)
T ss_pred HhcCcccCCCHHHeEEeCCcccchHHHHhcCC
Confidence 99830 01899999999999988888777764
|
Note that the EC number for the kinase function is: 2.7.1.78 |
| >COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.43 E-value=1.8e-13 Score=106.14 Aligned_cols=64 Identities=22% Similarity=0.244 Sum_probs=52.9
Q ss_pred ccCCCCCHHHHHHHHHHcCCCCCCCCcEEEEecCHHHHHHHHHcCCeEEEEcCCCCCcccccchhhhhhh
Q 026543 149 VKQGKPSPDIFLAAAKRFEGGPIDSQEILVFEDAPSGVLAAKNAGMSVVMVPDPRLDSSYHSNADQLLSS 218 (237)
Q Consensus 149 ~~~~kp~~~~~~~~l~~~~~~~~~~~~~~~igD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~~ 218 (237)
...+..|..+++.+++++| ++++++++|||+.||++|.+.+| .+|.+++..+..+..++++..+
T Consensus 184 ~~~g~~K~~al~~l~~~lg---i~~~~v~afGD~~ND~~Ml~~ag---~gvam~Na~~~~k~~A~~vt~~ 247 (264)
T COG0561 184 TPKGVSKGYALQRLAKLLG---IKLEEVIAFGDSTNDIEMLEVAG---LGVAMGNADEELKELADYVTTS 247 (264)
T ss_pred ecCCCchHHHHHHHHHHhC---CCHHHeEEeCCccccHHHHHhcC---eeeeccCCCHHHHhhCCcccCC
Confidence 3456677899999999999 99999999999999999999999 6677778866666667655444
|
|
| >KOG2882 consensus p-Nitrophenyl phosphatase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.42 E-value=1.2e-12 Score=98.95 Aligned_cols=76 Identities=24% Similarity=0.283 Sum_probs=65.8
Q ss_pred CccCCCCCHHHHHHHHHHcCCCCCCCCcEEEEecCH-HHHHHHHHcCCeEEEEcCCCCC--------cccccchhhhhhh
Q 026543 148 EVKQGKPSPDIFLAAAKRFEGGPIDSQEILVFEDAP-SGVLAAKNAGMSVVMVPDPRLD--------SSYHSNADQLLSS 218 (237)
Q Consensus 148 ~~~~~kp~~~~~~~~l~~~~~~~~~~~~~~~igD~~-~Di~~a~~~G~~~i~v~~~~~~--------~~~~~~~~~~~~~ 218 (237)
..-.+||++.++..++++++ ++|++++||||+. +||.-++++|+++++|-+|... ......||+.+++
T Consensus 219 P~v~GKP~~~m~~~l~~~~~---i~psRt~mvGDRL~TDIlFG~~~G~~TLLvltGv~~led~~~~~~~~~~~PDyy~~~ 295 (306)
T KOG2882|consen 219 PIVLGKPSTFMFEYLLEKFN---IDPSRTCMVGDRLDTDILFGKNCGFKTLLVLSGVTTLEDILEAQGDNKMVPDYYADS 295 (306)
T ss_pred CeecCCCCHHHHHHHHHHcC---CCcceEEEEcccchhhhhHhhccCcceEEEecCcCcHHHHHhcccccCCCCchHHhh
Confidence 45578999999999999999 9999999999999 9999999999999999998772 1234458999999
Q ss_pred hcccCCCC
Q 026543 219 LLGFNPKD 226 (237)
Q Consensus 219 ~~el~~~l 226 (237)
+.++.+.+
T Consensus 296 l~d~~~~~ 303 (306)
T KOG2882|consen 296 LGDLLPLL 303 (306)
T ss_pred HHHHhhhc
Confidence 99886543
|
|
| >TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily | Back alignment and domain information |
|---|
Probab=99.41 E-value=6.8e-14 Score=105.98 Aligned_cols=66 Identities=18% Similarity=0.140 Sum_probs=54.4
Q ss_pred ccCCCCCHHHHHHHHHHcCCCCCCCCcEEEEecCHHHHHHHHHcCCeEEEEcCCCCCcccccchhhhhhhhc
Q 026543 149 VKQGKPSPDIFLAAAKRFEGGPIDSQEILVFEDAPSGVLAAKNAGMSVVMVPDPRLDSSYHSNADQLLSSLL 220 (237)
Q Consensus 149 ~~~~kp~~~~~~~~l~~~~~~~~~~~~~~~igD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~~~~ 220 (237)
...+.+|..++.++++++| ++++++++|||+.||++|++.+|+ .|.+++..+..+..+++++.+..
T Consensus 144 ~~~~~~K~~~i~~l~~~~~---i~~~~~i~~GD~~NDi~m~~~ag~---~vam~Na~~~~k~~A~~vt~~~~ 209 (225)
T TIGR01482 144 LPQGVNKGVAVKKLKEKLG---IKPGETLVCGDSENDIDLFEVPGF---GVAVANAQPELKEWADYVTESPY 209 (225)
T ss_pred eeCCCCHHHHHHHHHHHhC---CCHHHEEEECCCHhhHHHHHhcCc---eEEcCChhHHHHHhcCeecCCCC
Confidence 3456678899999999999 999999999999999999999994 56667776666777887765543
|
catalyze the same reaction as SPP. |
| >PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=99.38 E-value=1.6e-13 Score=106.94 Aligned_cols=60 Identities=8% Similarity=0.043 Sum_probs=50.1
Q ss_pred ccCCCCCHHHHHHHHHHcCCCCCCCCcEEEEecCHHHHHHHHHcCCeEEEEcCCCCCcccccchhh
Q 026543 149 VKQGKPSPDIFLAAAKRFEGGPIDSQEILVFEDAPSGVLAAKNAGMSVVMVPDPRLDSSYHSNADQ 214 (237)
Q Consensus 149 ~~~~kp~~~~~~~~l~~~~~~~~~~~~~~~igD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~ 214 (237)
...+..|..+++++++++| ++++++++|||+.||++|.+.+| ..|+++++.+..+..|++
T Consensus 183 ~~~g~sKg~al~~l~~~~g---i~~~~v~afGD~~NDi~Ml~~ag---~~vAm~Na~~~vK~~A~~ 242 (272)
T PRK15126 183 LPVGCNKGAALAVLSQHLG---LSLADCMAFGDAMNDREMLGSVG---RGFIMGNAMPQLRAELPH 242 (272)
T ss_pred ecCCCChHHHHHHHHHHhC---CCHHHeEEecCCHHHHHHHHHcC---CceeccCChHHHHHhCCC
Confidence 3445567999999999999 99999999999999999999999 566667776666666654
|
|
| >TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal | Back alignment and domain information |
|---|
Probab=99.38 E-value=1.6e-12 Score=97.71 Aligned_cols=64 Identities=17% Similarity=0.145 Sum_probs=52.7
Q ss_pred cCCCCCHHHHHHHHHHcCCCCCCCCcEEEEecCHHHHHHHHHcCCeEEEEcCCCCCcccccchhhhhhhh
Q 026543 150 KQGKPSPDIFLAAAKRFEGGPIDSQEILVFEDAPSGVLAAKNAGMSVVMVPDPRLDSSYHSNADQLLSSL 219 (237)
Q Consensus 150 ~~~kp~~~~~~~~l~~~~~~~~~~~~~~~igD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~~~ 219 (237)
..+..+..+++++++++| ++++++++|||+.||++|++.+|+ .|.+++..+..+..+++++.+-
T Consensus 143 ~~~~~K~~~i~~l~~~~~---i~~~~~i~iGDs~ND~~ml~~ag~---~vam~na~~~~k~~A~~v~~~~ 206 (215)
T TIGR01487 143 KKGVDKGVGVEKLKELLG---IKPEEVAAIGDSENDIDLFRVVGF---KVAVANADDQLKEIADYVTSNP 206 (215)
T ss_pred cCCCChHHHHHHHHHHhC---CCHHHEEEECCCHHHHHHHHhCCC---eEEcCCccHHHHHhCCEEcCCC
Confidence 345667889999999999 999999999999999999999994 4555677666677778777643
|
TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. |
| >PRK10513 sugar phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.37 E-value=1.5e-13 Score=107.01 Aligned_cols=66 Identities=18% Similarity=0.138 Sum_probs=55.8
Q ss_pred ccCCCCCHHHHHHHHHHcCCCCCCCCcEEEEecCHHHHHHHHHcCCeEEEEcCCCCCcccccchhhhhhhhc
Q 026543 149 VKQGKPSPDIFLAAAKRFEGGPIDSQEILVFEDAPSGVLAAKNAGMSVVMVPDPRLDSSYHSNADQLLSSLL 220 (237)
Q Consensus 149 ~~~~kp~~~~~~~~l~~~~~~~~~~~~~~~igD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~~~~ 220 (237)
...+..|..+++++++++| ++++++++|||+.||++|.+.+| ..|+++++.+..+..|++++.+..
T Consensus 191 ~~~gvsKg~al~~l~~~~g---i~~~~v~afGD~~NDi~Ml~~ag---~~vAm~NA~~~vK~~A~~vt~~n~ 256 (270)
T PRK10513 191 LDKRVNKGTGVKSLAEHLG---IKPEEVMAIGDQENDIAMIEYAG---VGVAMGNAIPSVKEVAQFVTKSNL 256 (270)
T ss_pred eCCCCChHHHHHHHHHHhC---CCHHHEEEECCchhhHHHHHhCC---ceEEecCccHHHHHhcCeeccCCC
Confidence 3455677999999999999 99999999999999999999999 566667887777888888876543
|
|
| >KOG3040 consensus Predicted sugar phosphatase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.34 E-value=1.8e-12 Score=92.56 Aligned_cols=74 Identities=22% Similarity=0.259 Sum_probs=64.2
Q ss_pred cCCCCCHHHHHHHHHHcCCCCCCCCcEEEEecCH-HHHHHHHHcCCeEEEEcCCCCCc----ccccchhhhhhhhcccCC
Q 026543 150 KQGKPSPDIFLAAAKRFEGGPIDSQEILVFEDAP-SGVLAAKNAGMSVVMVPDPRLDS----SYHSNADQLLSSLLGFNP 224 (237)
Q Consensus 150 ~~~kp~~~~~~~~l~~~~~~~~~~~~~~~igD~~-~Di~~a~~~G~~~i~v~~~~~~~----~~~~~~~~~~~~~~el~~ 224 (237)
..+||++..|+.+++.+| ++|++++||||.. .|+-.|+.+||..|.|.+|...+ .....|+..+++|.|...
T Consensus 178 vvGKP~~~fFe~al~~~g---v~p~~aVMIGDD~~dDvgGAq~~GMrgilVkTGK~rpsDe~k~~~~p~~~~d~f~~AVd 254 (262)
T KOG3040|consen 178 VVGKPSPFFFESALQALG---VDPEEAVMIGDDLNDDVGGAQACGMRGILVKTGKFRPSDEEKPPVPPDLTADNFADAVD 254 (262)
T ss_pred EecCCCHHHHHHHHHhcC---CChHHheEEccccccchhhHhhhcceeEEeeccccCCcccccCCCCcchhhhhHHHHHH
Confidence 468999999999999999 9999999999998 89999999999999999987732 245668889999988765
Q ss_pred CC
Q 026543 225 KD 226 (237)
Q Consensus 225 ~l 226 (237)
++
T Consensus 255 ~I 256 (262)
T KOG3040|consen 255 LI 256 (262)
T ss_pred HH
Confidence 54
|
|
| >KOG3120 consensus Predicted haloacid dehalogenase-like hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.33 E-value=7.1e-11 Score=85.27 Aligned_cols=176 Identities=11% Similarity=0.109 Sum_probs=109.8
Q ss_pred CccEEEEecCcccccchhhHHHHHHHHHHHcCCCCCHHHHHHh-cCCChHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHH
Q 026543 9 PITHVIFDMDGLLLDTEKFYTEVQELILARYNKTFDWSLKAKM-MGKKAIEAAQVFVEETGISDKLSAEDFLVQREETLQ 87 (237)
Q Consensus 9 ~~~~vifD~DGTL~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (237)
+-.+++||||-|+++.+.. ..+...++........... -..-..+.+.+++++++-. +...+++.+..
T Consensus 12 ~ril~~FDFD~TIid~dSD-----~wVv~~lp~~~l~~qL~~t~p~~~Wne~M~rv~k~Lheq-gv~~~~ik~~~----- 80 (256)
T KOG3120|consen 12 PRILLVFDFDRTIIDQDSD-----NWVVDELPTTDLFNQLRDTYPKGFWNELMDRVFKELHEQ-GVRIAEIKQVL----- 80 (256)
T ss_pred CcEEEEEecCceeecCCcc-----hHHHHhcccchhHHHHHHhcccchHHHHHHHHHHHHHHc-CCCHHHHHHHH-----
Confidence 4468999999999976532 2223334433332222222 2223556677777776622 24455544443
Q ss_pred hhcCCCCCCccHHHHHHHHHhCCC-CEEEEeCChhhHHHHHHhhhhhhhhhcceeeeCC--------------CCCccC-
Q 026543 88 TLFPTSELMPGASHLIRHLHAKGI-PMCVATGSLARHFELKTQKHRELFSLMHHVVRGD--------------DPEVKQ- 151 (237)
Q Consensus 88 ~~~~~~~~~~~~~~~l~~l~~~g~-~v~i~s~~~~~~~~~~~~~~~gl~~~f~~~~~~~--------------~~~~~~- 151 (237)
..++..||+.++++.+++.|. .+.|+|.++.- +...++++.|+.++|+.|++.. +....+
T Consensus 81 ---r~iP~~Pgmv~lik~~ak~g~~eliIVSDaNsf-FIe~~Lea~~~~d~F~~IfTNPa~~da~G~L~v~pyH~~hsC~ 156 (256)
T KOG3120|consen 81 ---RSIPIVPGMVRLIKSAAKLGCFELIIVSDANSF-FIEEILEAAGIHDLFSEIFTNPACVDASGRLLVRPYHTQHSCN 156 (256)
T ss_pred ---hcCCCCccHHHHHHHHHhCCCceEEEEecCchh-HHHHHHHHccHHHHHHHHhcCCcccCCCCcEEeecCCCCCccC
Confidence 348999999999999999985 99999986554 4557899999999999887632 000000
Q ss_pred CCC----CHHHHHHHHH---HcCCCCCCCCcEEEEecCHHHHHHHHHc-CCeEEEEcCC
Q 026543 152 GKP----SPDIFLAAAK---RFEGGPIDSQEILVFEDAPSGVLAAKNA-GMSVVMVPDP 202 (237)
Q Consensus 152 ~kp----~~~~~~~~l~---~~~~~~~~~~~~~~igD~~~Di~~a~~~-G~~~i~v~~~ 202 (237)
.-| |...+..+.. +-| +..++.+||||+.||+...... +..+++...+
T Consensus 157 ~CPsNmCKg~Vl~~~~~s~~~~g---v~yer~iYvGDG~nD~CP~l~Lr~~D~ampRkg 212 (256)
T KOG3120|consen 157 LCPSNMCKGLVLDELVASQLKDG---VRYERLIYVGDGANDFCPVLRLRACDVAMPRKG 212 (256)
T ss_pred cCchhhhhhHHHHHHHHHHhhcC---CceeeEEEEcCCCCCcCcchhcccCceecccCC
Confidence 111 2233333322 234 7888999999999999776665 4444444433
|
|
| >PRK10976 putative hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=99.32 E-value=4.3e-13 Score=104.15 Aligned_cols=64 Identities=14% Similarity=0.123 Sum_probs=52.0
Q ss_pred ccCCCCCHHHHHHHHHHcCCCCCCCCcEEEEecCHHHHHHHHHcCCeEEEEcCCCCCcccccchh--hhhhh
Q 026543 149 VKQGKPSPDIFLAAAKRFEGGPIDSQEILVFEDAPSGVLAAKNAGMSVVMVPDPRLDSSYHSNAD--QLLSS 218 (237)
Q Consensus 149 ~~~~kp~~~~~~~~l~~~~~~~~~~~~~~~igD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~--~~~~~ 218 (237)
...+..|..+++++++++| ++++++++|||+.||++|.+.+|. .|+++++.+..+..|+ +++.+
T Consensus 185 ~~~gvsKg~al~~l~~~lg---i~~~~viafGD~~NDi~Ml~~ag~---~vAm~NA~~~vK~~A~~~~v~~~ 250 (266)
T PRK10976 185 MAGGVSKGHALEAVAKKLG---YSLKDCIAFGDGMNDAEMLSMAGK---GCIMGNAHQRLKDLLPELEVIGS 250 (266)
T ss_pred EcCCCChHHHHHHHHHHcC---CCHHHeEEEcCCcccHHHHHHcCC---CeeecCCcHHHHHhCCCCeeccc
Confidence 3345567999999999999 999999999999999999999994 5666777666666665 45544
|
|
| >PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases | Back alignment and domain information |
|---|
Probab=99.31 E-value=3.8e-11 Score=85.09 Aligned_cols=96 Identities=21% Similarity=0.243 Sum_probs=61.5
Q ss_pred CCccHHHHHHHHHhCCC--CEEEEeCCh------hhHHHHHHhhhhhhhhhcceeeeCCCCCccCCCCCHHHHHHHHHHc
Q 026543 95 LMPGASHLIRHLHAKGI--PMCVATGSL------ARHFELKTQKHRELFSLMHHVVRGDDPEVKQGKPSPDIFLAAAKRF 166 (237)
Q Consensus 95 ~~~~~~~~l~~l~~~g~--~v~i~s~~~------~~~~~~~~~~~~gl~~~f~~~~~~~~~~~~~~kp~~~~~~~~l~~~ 166 (237)
+.|.+.+.++.+++.+. +++|+||+. .......+.+.+|+ . ++.. ...|| ..+..+++.+
T Consensus 60 i~~~~~~~~~~l~~~~~~~~v~IvSNsaGs~~d~~~~~a~~~~~~lgI----p-vl~h-----~~kKP--~~~~~i~~~~ 127 (168)
T PF09419_consen 60 IPPEYAEWLNELKKQFGKDRVLIVSNSAGSSDDPDGERAEALEKALGI----P-VLRH-----RAKKP--GCFREILKYF 127 (168)
T ss_pred CCHHHHHHHHHHHHHCCCCeEEEEECCCCcccCccHHHHHHHHHhhCC----c-EEEe-----CCCCC--ccHHHHHHHH
Confidence 33444455566666654 599999963 12222234444443 1 1211 12455 5666777777
Q ss_pred CCC--CCCCCcEEEEecCH-HHHHHHHHcCCeEEEEcCC
Q 026543 167 EGG--PIDSQEILVFEDAP-SGVLAAKNAGMSVVMVPDP 202 (237)
Q Consensus 167 ~~~--~~~~~~~~~igD~~-~Di~~a~~~G~~~i~v~~~ 202 (237)
+.. ...|+++++|||.. +|+-+|...|+.+|+|..|
T Consensus 128 ~~~~~~~~p~eiavIGDrl~TDVl~gN~~G~~tilv~~g 166 (168)
T PF09419_consen 128 KCQKVVTSPSEIAVIGDRLFTDVLMGNRMGSYTILVTDG 166 (168)
T ss_pred hhccCCCCchhEEEEcchHHHHHHHhhccCceEEEEecC
Confidence 610 02499999999999 9999999999999999876
|
All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family. |
| >PTZ00445 p36-lilke protein; Provisional | Back alignment and domain information |
|---|
Probab=99.30 E-value=2.1e-11 Score=88.28 Aligned_cols=107 Identities=19% Similarity=0.173 Sum_probs=82.2
Q ss_pred CCCccHHHHHHHHHhCCCCEEEEeCChhhH--------------HHHHHhhhhhhhhhcceeeeCC--------C-CCcc
Q 026543 94 ELMPGASHLIRHLHAKGIPMCVATGSLARH--------------FELKTQKHRELFSLMHHVVRGD--------D-PEVK 150 (237)
Q Consensus 94 ~~~~~~~~~l~~l~~~g~~v~i~s~~~~~~--------------~~~~~~~~~gl~~~f~~~~~~~--------~-~~~~ 150 (237)
.+.|..+.++..|++.|++++|+|-++... .....++..+...-...+++.. + ...+
T Consensus 75 ~~tpefk~~~~~l~~~~I~v~VVTfSd~~~~~~~~~~~~Isg~~li~~~lk~s~~~~~i~~~~~yyp~~w~~p~~y~~~g 154 (219)
T PTZ00445 75 SVTPDFKILGKRLKNSNIKISVVTFSDKELIPSENRPRYISGDRMVEAALKKSKCDFKIKKVYAYYPKFWQEPSDYRPLG 154 (219)
T ss_pred cCCHHHHHHHHHHHHCCCeEEEEEccchhhccccCCcceechHHHHHHHHHhcCccceeeeeeeeCCcccCChhhhhhhc
Confidence 478889999999999999999999866643 2223344333333344555332 0 0246
Q ss_pred CCCCCHHH--H--HHHHHHcCCCCCCCCcEEEEecCHHHHHHHHHcCCeEEEEcCCC
Q 026543 151 QGKPSPDI--F--LAAAKRFEGGPIDSQEILVFEDAPSGVLAAKNAGMSVVMVPDPR 203 (237)
Q Consensus 151 ~~kp~~~~--~--~~~l~~~~~~~~~~~~~~~igD~~~Di~~a~~~G~~~i~v~~~~ 203 (237)
..||+|.. | +.+++++| +.|++|+||+|+..++++|++.|+.++.+..+.
T Consensus 155 l~KPdp~iK~yHle~ll~~~g---l~peE~LFIDD~~~NVeaA~~lGi~ai~f~~~e 208 (219)
T PTZ00445 155 LDAPMPLDKSYHLKQVCSDFN---VNPDEILFIDDDMNNCKNALKEGYIALHVTGNE 208 (219)
T ss_pred ccCCCccchHHHHHHHHHHcC---CCHHHeEeecCCHHHHHHHHHCCCEEEEcCChH
Confidence 77999998 8 99999999 999999999999999999999999999997643
|
|
| >PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B | Back alignment and domain information |
|---|
Probab=99.29 E-value=2.3e-11 Score=89.81 Aligned_cols=87 Identities=16% Similarity=0.257 Sum_probs=58.0
Q ss_pred ccHHHHHHHHHhCCCCEEEEeCChhhHHHHHHhhhhhhhhhcceeeeCCC--CC-------ccCCC--CCHHHHHHH---
Q 026543 97 PGASHLIRHLHAKGIPMCVATGSLARHFELKTQKHRELFSLMHHVVRGDD--PE-------VKQGK--PSPDIFLAA--- 162 (237)
Q Consensus 97 ~~~~~~l~~l~~~g~~v~i~s~~~~~~~~~~~~~~~gl~~~f~~~~~~~~--~~-------~~~~k--p~~~~~~~~--- 162 (237)
+++.++++.++++|++++|+|++.. .+...+++.+|+.... +++... .. ..... -|...++.+
T Consensus 92 ~~~~e~i~~~~~~~~~v~IvS~~~~-~~i~~~~~~~~i~~~~--v~~~~~~~~~~~~~~~~~~~~~~~~K~~~l~~~~~~ 168 (192)
T PF12710_consen 92 PDAMELIRELKDNGIKVVIVSGSPD-EIIEPIAERLGIDDDN--VIGNELFDNGGGIFTGRITGSNCGGKAEALKELYIR 168 (192)
T ss_dssp TTHHHHHHHHHHTTSEEEEEEEEEH-HHHHHHHHHTTSSEGG--EEEEEEECTTCCEEEEEEEEEEESHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHCCCEEEEECCCcH-HHHHHHHHHcCCCceE--EEEEeeeecccceeeeeECCCCCCcHHHHHHHHHHH
Confidence 6777999999999999999999755 4455677777765421 222110 00 00000 145555555
Q ss_pred HHHcCCCCCCCCcEEEEecCHHHHHHHH
Q 026543 163 AKRFEGGPIDSQEILVFEDAPSGVLAAK 190 (237)
Q Consensus 163 l~~~~~~~~~~~~~~~igD~~~Di~~a~ 190 (237)
..+ + ..+.++++||||.+|+.+++
T Consensus 169 ~~~-~---~~~~~~~~iGDs~~D~~~lr 192 (192)
T PF12710_consen 169 DEE-D---IDPDRVIAIGDSINDLPMLR 192 (192)
T ss_dssp HHH-T---HTCCEEEEEESSGGGHHHHH
T ss_pred hhc-C---CCCCeEEEEECCHHHHHHhC
Confidence 334 7 88999999999999999975
|
|
| >PLN02887 hydrolase family protein | Back alignment and domain information |
|---|
Probab=99.28 E-value=8.5e-13 Score=111.22 Aligned_cols=66 Identities=15% Similarity=0.076 Sum_probs=56.2
Q ss_pred ccCCCCCHHHHHHHHHHcCCCCCCCCcEEEEecCHHHHHHHHHcCCeEEEEcCCCCCcccccchhhhhhhhc
Q 026543 149 VKQGKPSPDIFLAAAKRFEGGPIDSQEILVFEDAPSGVLAAKNAGMSVVMVPDPRLDSSYHSNADQLLSSLL 220 (237)
Q Consensus 149 ~~~~kp~~~~~~~~l~~~~~~~~~~~~~~~igD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~~~~ 220 (237)
...+..|..++.++++++| ++++++++|||+.||++|.+.+| .+|+++++.+..+..|++++.+..
T Consensus 502 ~p~gvSKG~ALk~L~e~lG---I~~eeviAFGDs~NDIeMLe~AG---~gVAMgNA~eeVK~~Ad~VT~sNd 567 (580)
T PLN02887 502 VPPGTSKGNGVKMLLNHLG---VSPDEIMAIGDGENDIEMLQLAS---LGVALSNGAEKTKAVADVIGVSND 567 (580)
T ss_pred ecCCCCHHHHHHHHHHHcC---CCHHHEEEEecchhhHHHHHHCC---CEEEeCCCCHHHHHhCCEEeCCCC
Confidence 3455667999999999999 99999999999999999999999 567778887777888888776543
|
|
| >COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.25 E-value=2.4e-12 Score=87.84 Aligned_cols=95 Identities=20% Similarity=0.258 Sum_probs=69.8
Q ss_pred HHHHHhCCCCEEEEeCChhhHHHHHHhhhhhhhhhcceeeeCCCCCccCCCCCHHHHHHHHHHcCCCCCCCCcEEEEecC
Q 026543 103 IRHLHAKGIPMCVATGSLARHFELKTQKHRELFSLMHHVVRGDDPEVKQGKPSPDIFLAAAKRFEGGPIDSQEILVFEDA 182 (237)
Q Consensus 103 l~~l~~~g~~v~i~s~~~~~~~~~~~~~~~gl~~~f~~~~~~~~~~~~~~kp~~~~~~~~l~~~~~~~~~~~~~~~igD~ 182 (237)
++.|.+.|++++|+|+.....+..+ .+.+|+.. ++-+. +.+...+..++++++ +.++++.||||.
T Consensus 44 ik~l~~~Gi~vAIITGr~s~ive~R-a~~LGI~~----~~qG~-------~dK~~a~~~L~~~~~---l~~e~~ayiGDD 108 (170)
T COG1778 44 IKLLLKSGIKVAIITGRDSPIVEKR-AKDLGIKH----LYQGI-------SDKLAAFEELLKKLN---LDPEEVAYVGDD 108 (170)
T ss_pred HHHHHHcCCeEEEEeCCCCHHHHHH-HHHcCCce----eeech-------HhHHHHHHHHHHHhC---CCHHHhhhhcCc
Confidence 4567888999999999877766655 56667643 33332 235789999999999 999999999999
Q ss_pred HHHHHHHHHcCCeEEEEcCCCCCcccccchhhh
Q 026543 183 PSGVLAAKNAGMSVVMVPDPRLDSSYHSNADQL 215 (237)
Q Consensus 183 ~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~ 215 (237)
.+|+....++|..++ .....+.....++++
T Consensus 109 ~~Dlpvm~~vGls~a---~~dAh~~v~~~a~~V 138 (170)
T COG1778 109 LVDLPVMEKVGLSVA---VADAHPLLKQRADYV 138 (170)
T ss_pred cccHHHHHHcCCccc---ccccCHHHHHhhHhh
Confidence 999999999996544 333333334444444
|
|
| >TIGR01533 lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) family | Back alignment and domain information |
|---|
Probab=99.25 E-value=2.3e-10 Score=87.57 Aligned_cols=86 Identities=16% Similarity=0.210 Sum_probs=64.7
Q ss_pred CCCCCccHHHHHHHHHhCCCCEEEEeCChhhH--HHHHHhhhhhhhhh-cceeeeCCCCCccCCCCCHHHHHHHHHHcCC
Q 026543 92 TSELMPGASHLIRHLHAKGIPMCVATGSLARH--FELKTQKHRELFSL-MHHVVRGDDPEVKQGKPSPDIFLAAAKRFEG 168 (237)
Q Consensus 92 ~~~~~~~~~~~l~~l~~~g~~v~i~s~~~~~~--~~~~~~~~~gl~~~-f~~~~~~~~~~~~~~kp~~~~~~~~l~~~~~ 168 (237)
...++||+.++++.|+++|++++++||+.... .....++..|+... ++.++..+ . .++++.....+.+.++
T Consensus 116 ~a~~ipGA~e~L~~L~~~G~~v~iVTnR~~~~~~~T~~~Lkk~Gi~~~~~d~lllr~--~---~~~K~~rr~~I~~~y~- 189 (266)
T TIGR01533 116 QAKPVAGALDFLNYANSKGVKIFYVSNRSEKEKAATLKNLKRFGFPQADEEHLLLKK--D---KSSKESRRQKVQKDYE- 189 (266)
T ss_pred CCCcCccHHHHHHHHHHCCCeEEEEeCCCcchHHHHHHHHHHcCcCCCCcceEEeCC--C---CCCcHHHHHHHHhcCC-
Confidence 46799999999999999999999999976433 22345667788654 45666554 2 2456777777878777
Q ss_pred CCCCCCcEEEEecCHHHHHHH
Q 026543 169 GPIDSQEILVFEDAPSGVLAA 189 (237)
Q Consensus 169 ~~~~~~~~~~igD~~~Di~~a 189 (237)
+ +++|||+.+|+..+
T Consensus 190 --I----vl~vGD~~~Df~~~ 204 (266)
T TIGR01533 190 --I----VLLFGDNLLDFDDF 204 (266)
T ss_pred --E----EEEECCCHHHhhhh
Confidence 6 89999999999653
|
which in turn belongs to the haloacid dehalogenase (HAD) superfamily of aspartate-dependent hydrolases. Members are found on the outer membrane of Gram-negative bacteria and the cytoplasmic membrane of Gram-positive bacteria. Most members have classic lipoprotein signal sequences. A critical role of this 5'-nucleotidase in Haemophilus influenzae is the degradation of external riboside in order to allow transport into the cell. An earlier suggested role in hemin transport is no longer current. This enzyme may also have other physiologically significant roles. |
| >PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=99.25 E-value=2.8e-10 Score=88.68 Aligned_cols=47 Identities=15% Similarity=0.189 Sum_probs=40.5
Q ss_pred CCHHHHHHHHHHcCCCCCCC-CcEEEEecCHHHHHHHHHcCCeEEEEcCCCCCc
Q 026543 154 PSPDIFLAAAKRFEGGPIDS-QEILVFEDAPSGVLAAKNAGMSVVMVPDPRLDS 206 (237)
Q Consensus 154 p~~~~~~~~l~~~~~~~~~~-~~~~~igD~~~Di~~a~~~G~~~i~v~~~~~~~ 206 (237)
.+..+++++++++| +++ +++++|||+.||++|++.+|+. |.++++.+
T Consensus 190 ~Kg~al~~l~~~~~---i~~~~~v~~~GDs~NDi~m~~~ag~~---vam~NA~~ 237 (273)
T PRK00192 190 DKGKAVRWLKELYR---RQDGVETIALGDSPNDLPMLEAADIA---VVVPGPDG 237 (273)
T ss_pred CHHHHHHHHHHHHh---ccCCceEEEEcCChhhHHHHHhCCee---EEeCCCCC
Confidence 67889999999999 999 9999999999999999999954 44555543
|
|
| >PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=99.23 E-value=3.4e-11 Score=93.74 Aligned_cols=44 Identities=7% Similarity=0.018 Sum_probs=39.4
Q ss_pred ccCCCCCHHHHHHHHHHcCCCCC---CCCcEEEEecCHHHHHHHHHcCCe
Q 026543 149 VKQGKPSPDIFLAAAKRFEGGPI---DSQEILVFEDAPSGVLAAKNAGMS 195 (237)
Q Consensus 149 ~~~~kp~~~~~~~~l~~~~~~~~---~~~~~~~igD~~~Di~~a~~~G~~ 195 (237)
...+..|..+++.+++++| + +++++++|||+.||++|.+.+|+.
T Consensus 182 ~~~g~sKg~al~~l~~~lg---i~~~~~~~viafGDs~NDi~Ml~~ag~g 228 (271)
T PRK03669 182 LDASAGKDQAANWLIATYQ---QLSGTRPTTLGLGDGPNDAPLLDVMDYA 228 (271)
T ss_pred ecCCCCHHHHHHHHHHHHH---hhcCCCceEEEEcCCHHHHHHHHhCCEE
Confidence 3455667899999999999 9 999999999999999999999954
|
|
| >PF08645 PNK3P: Polynucleotide kinase 3 phosphatase; InterPro: IPR013954 Polynucleotide kinase 3 phosphatases play a role in the repair of single breaks in DNA induced by DNA-damaging agents such as gamma radiation and camptothecin [] | Back alignment and domain information |
|---|
Probab=99.20 E-value=3.8e-11 Score=85.41 Aligned_cols=98 Identities=23% Similarity=0.326 Sum_probs=63.9
Q ss_pred CCccHHHHHHHHHhCCCCEEEEeCChh-------h---HHHH---HHhhhhhhhhhcceeeeCCCCCccCCCCCHHHHHH
Q 026543 95 LMPGASHLIRHLHAKGIPMCVATGSLA-------R---HFEL---KTQKHRELFSLMHHVVRGDDPEVKQGKPSPDIFLA 161 (237)
Q Consensus 95 ~~~~~~~~l~~l~~~g~~v~i~s~~~~-------~---~~~~---~~~~~~gl~~~f~~~~~~~~~~~~~~kp~~~~~~~ 161 (237)
..+++.+.|+.|.+.|+.++|+||-.. . .+.. .+++.+++. +...++.. .....||++.++..
T Consensus 30 ~~~~v~~~L~~l~~~Gy~IvIvTNQ~gi~~~~~~~~~~~~~~ki~~il~~l~ip--~~~~~a~~--~d~~RKP~~GM~~~ 105 (159)
T PF08645_consen 30 FPPGVPEALRELHKKGYKIVIVTNQSGIGRGMGEKDLENFHEKIENILKELGIP--IQVYAAPH--KDPCRKPNPGMWEF 105 (159)
T ss_dssp C-TTHHHHHHHHHHTTEEEEEEEE-CCCCCTBTCCHHHHHHHHHHHHHHHCTS---EEEEECGC--SSTTSTTSSHHHHH
T ss_pred cchhHHHHHHHHHhcCCeEEEEeCccccccccccchHHHHHHHHHHHHHHcCCc--eEEEecCC--CCCCCCCchhHHHH
Confidence 345799999999999999999998311 1 1111 222223322 22333333 34689999999999
Q ss_pred HHHHcCC-CCCCCCcEEEEecC-----------HHHHHHHHHcCCeE
Q 026543 162 AAKRFEG-GPIDSQEILVFEDA-----------PSGVLAAKNAGMSV 196 (237)
Q Consensus 162 ~l~~~~~-~~~~~~~~~~igD~-----------~~Di~~a~~~G~~~ 196 (237)
++++++. ..++.++++||||. ..|..-|.++|++.
T Consensus 106 ~~~~~~~~~~id~~~Sf~VGDaagr~~~~~d~s~~D~~fA~N~gi~f 152 (159)
T PF08645_consen 106 ALKDYNDGVEIDLANSFYVGDAAGRSKKKKDFSDSDRKFALNCGIKF 152 (159)
T ss_dssp HCCCTSTT--S-CCC-EEEESSCHCTB-S--S--HHHHHHHHHT--E
T ss_pred HHHhccccccccccceEEEeccCCCCCcccccChhHHHHHHHcCCcc
Confidence 9999971 11489999999996 68999999999864
|
; PDB: 2FPW_A 2FPR_A 2FPX_A 2FPS_A 2FPU_B 3ZVM_A 1YJ5_A 3ZVL_A 3U7E_B 3U7G_A .... |
| >COG4359 Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=99.17 E-value=2.1e-09 Score=75.58 Aligned_cols=156 Identities=16% Similarity=0.183 Sum_probs=93.4
Q ss_pred EEEEecCcccccchhhHHHHHHHHHHHcCCCCCHHHHHHhc--CCChHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHhh
Q 026543 12 HVIFDMDGLLLDTEKFYTEVQELILARYNKTFDWSLKAKMM--GKKAIEAAQVFVEETGISDKLSAEDFLVQREETLQTL 89 (237)
Q Consensus 12 ~vifD~DGTL~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (237)
.|+.|+|||+.-.+. ..-+...+|............ ..+..+.+.+++...+.+ .++.... .
T Consensus 5 vi~sDFDGTITl~Ds-----~~~itdtf~~~e~k~l~~~vls~tiS~rd~~g~mf~~i~~s----~~Eile~-------l 68 (220)
T COG4359 5 VIFSDFDGTITLNDS-----NDYITDTFGPGEWKALKDGVLSKTISFRDGFGRMFGSIHSS----LEEILEF-------L 68 (220)
T ss_pred EEEecCCCceEecch-----hHHHHhccCchHHHHHHHHHhhCceeHHHHHHHHHHhcCCC----HHHHHHH-------H
Confidence 566699999984331 123334444432222222222 234556666777766644 3333322 2
Q ss_pred cCCCCCCccHHHHHHHHHhCCCCEEEEeCChhhHHHHHHhhhhhhhhhc-----------------ceeeeCCCCCccCC
Q 026543 90 FPTSELMPGASHLIRHLHAKGIPMCVATGSLARHFELKTQKHRELFSLM-----------------HHVVRGDDPEVKQG 152 (237)
Q Consensus 90 ~~~~~~~~~~~~~l~~l~~~g~~v~i~s~~~~~~~~~~~~~~~gl~~~f-----------------~~~~~~~~~~~~~~ 152 (237)
...+...||.++++++++.++++++|+|+|....+. .+++..+-.+.. +.+...++...++.
T Consensus 69 lk~i~Idp~fKef~e~ike~di~fiVvSsGm~~fI~-~lfe~ivgke~i~~idi~sn~~~ih~dg~h~i~~~~ds~fG~d 147 (220)
T COG4359 69 LKDIKIDPGFKEFVEWIKEHDIPFIVVSSGMDPFIY-PLFEGIVGKERIYCIDIVSNNDYIHIDGQHSIKYTDDSQFGHD 147 (220)
T ss_pred HhhcccCccHHHHHHHHHHcCCCEEEEeCCCchHHH-HHHHhhccccceeeeEEeecCceEcCCCceeeecCCccccCCC
Confidence 234789999999999999999999999997665544 455543311111 12222221123333
Q ss_pred CCCHHHHHHHHHHcCCCCCCCCcEEEEecCHHHHHHHHHcC
Q 026543 153 KPSPDIFLAAAKRFEGGPIDSQEILVFEDAPSGVLAAKNAG 193 (237)
Q Consensus 153 kp~~~~~~~~l~~~~~~~~~~~~~~~igD~~~Di~~a~~~G 193 (237)
| +. +...+. -+++.++|.|||..|+.+|+...
T Consensus 148 K--~~----vI~~l~---e~~e~~fy~GDsvsDlsaaklsD 179 (220)
T COG4359 148 K--SS----VIHELS---EPNESIFYCGDSVSDLSAAKLSD 179 (220)
T ss_pred c--ch----hHHHhh---cCCceEEEecCCcccccHhhhhh
Confidence 3 33 444555 55667999999999999999987
|
|
| >TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein | Back alignment and domain information |
|---|
Probab=99.16 E-value=2.2e-09 Score=81.05 Aligned_cols=43 Identities=14% Similarity=0.103 Sum_probs=38.3
Q ss_pred CCCCHHHHHHHHHHcCCCCCCCCcEEEEecCHHHHHHHHHcCCeEE
Q 026543 152 GKPSPDIFLAAAKRFEGGPIDSQEILVFEDAPSGVLAAKNAGMSVV 197 (237)
Q Consensus 152 ~kp~~~~~~~~l~~~~~~~~~~~~~~~igD~~~Di~~a~~~G~~~i 197 (237)
+..|+.++.++++++| ++++++++|||+.||++|.+.+|..++
T Consensus 177 ~~~Kg~al~~l~~~lg---i~~~~vi~~GD~~NDi~ml~~ag~~va 219 (221)
T TIGR02463 177 SSSKGKAANWLKATYN---QPDVKTLGLGDGPNDLPLLEVADYAVV 219 (221)
T ss_pred CCCHHHHHHHHHHHhC---CCCCcEEEECCCHHHHHHHHhCCceEE
Confidence 3446778999999999 999999999999999999999997654
|
This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate. |
| >TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily | Back alignment and domain information |
|---|
Probab=99.16 E-value=3.3e-11 Score=93.07 Aligned_cols=65 Identities=20% Similarity=0.269 Sum_probs=51.5
Q ss_pred cCCCCCHHHHHHHHHHcCCCCCCCCcEEEEecCHHHHHHHHHcCCeEEEEcCCCCCcccccchhhhhhhhc
Q 026543 150 KQGKPSPDIFLAAAKRFEGGPIDSQEILVFEDAPSGVLAAKNAGMSVVMVPDPRLDSSYHSNADQLLSSLL 220 (237)
Q Consensus 150 ~~~kp~~~~~~~~l~~~~~~~~~~~~~~~igD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~~~~ 220 (237)
..+..|..+++.++++++ ++++++++|||+.||++|++.+|+.+++ ++..+..+..+++++.+..
T Consensus 184 ~~~~~K~~~i~~~~~~~~---~~~~~~~~~GD~~nD~~m~~~~~~~~a~---~na~~~~k~~a~~~~~~n~ 248 (256)
T TIGR00099 184 AKGVSKGSALQSLAEALG---ISLEDVIAFGDGMNDIEMLEAAGYGVAM---GNADEELKALADYVTDSNN 248 (256)
T ss_pred CCCCChHHHHHHHHHHcC---CCHHHEEEeCCcHHhHHHHHhCCceeEe---cCchHHHHHhCCEEecCCC
Confidence 345667999999999999 9999999999999999999999976443 4554455666777766543
|
The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences. |
| >TIGR01512 ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=99.11 E-value=1.3e-10 Score=98.52 Aligned_cols=112 Identities=19% Similarity=0.180 Sum_probs=84.7
Q ss_pred CCCCCccHHHHHHHHHhCCC-CEEEEeCChhhHHHHHHhhhhhhhhhcceeeeCCCCCccCCCCCHHHHHHHHHHcCCCC
Q 026543 92 TSELMPGASHLIRHLHAKGI-PMCVATGSLARHFELKTQKHRELFSLMHHVVRGDDPEVKQGKPSPDIFLAAAKRFEGGP 170 (237)
Q Consensus 92 ~~~~~~~~~~~l~~l~~~g~-~v~i~s~~~~~~~~~~~~~~~gl~~~f~~~~~~~~~~~~~~kp~~~~~~~~l~~~~~~~ 170 (237)
..+++||+.++++.|+++|+ +++++||... .....+++.+|+..+|..+. | +....++++++
T Consensus 360 ~d~l~~~~~e~i~~L~~~Gi~~v~vvTgd~~-~~a~~i~~~lgi~~~f~~~~-----------p--~~K~~~i~~l~--- 422 (536)
T TIGR01512 360 SDEPRPDAAEAIAELKALGIEKVVMLTGDRR-AVAERVARELGIDEVHAELL-----------P--EDKLEIVKELR--- 422 (536)
T ss_pred eccchHHHHHHHHHHHHcCCCcEEEEcCCCH-HHHHHHHHHcCChhhhhccC-----------c--HHHHHHHHHHH---
Confidence 35789999999999999999 9999999544 45557788889877664332 1 12245677777
Q ss_pred CCCCcEEEEecCHHHHHHHHHcCCeEEEEcCC-CCCcccccchhhhh--hhhcccC
Q 026543 171 IDSQEILVFEDAPSGVLAAKNAGMSVVMVPDP-RLDSSYHSNADQLL--SSLLGFN 223 (237)
Q Consensus 171 ~~~~~~~~igD~~~Di~~a~~~G~~~i~v~~~-~~~~~~~~~~~~~~--~~~~el~ 223 (237)
..+++++||||+.||+++++.+| ++++.+ ...+.....+|.++ +++.++.
T Consensus 423 ~~~~~v~~vGDg~nD~~al~~A~---vgia~g~~~~~~~~~~ad~vl~~~~l~~l~ 475 (536)
T TIGR01512 423 EKYGPVAMVGDGINDAPALAAAD---VGIAMGASGSDVAIETADVVLLNDDLSRLP 475 (536)
T ss_pred hcCCEEEEEeCCHHHHHHHHhCC---EEEEeCCCccHHHHHhCCEEEECCCHHHHH
Confidence 67789999999999999999999 567766 33444455677777 6777764
|
. |
| >PF06941 NT5C: 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C); InterPro: IPR010708 This family consists of several 5' nucleotidase, deoxy (Pyrimidine), and cytosolic type C (NT5C) proteins | Back alignment and domain information |
|---|
Probab=99.10 E-value=4e-10 Score=83.11 Aligned_cols=171 Identities=18% Similarity=0.212 Sum_probs=89.9
Q ss_pred cE-EEEecCcccccchhhHHHHHHHHHHHcCCC--CCHHHHHHhcCCChHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHH
Q 026543 11 TH-VIFDMDGLLLDTEKFYTEVQELILARYNKT--FDWSLKAKMMGKKAIEAAQVFVEETGISDKLSAEDFLVQREETLQ 87 (237)
Q Consensus 11 ~~-vifD~DGTL~~~~~~~~~~~~~~~~~~g~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (237)
++ |++||||||.|..+.+...+. +.++.. .+.+....+ ...+.++.. ..+......+.+..
T Consensus 2 ~i~I~iDiDgVLad~~~~~~~~~n---~~~~~~~~~~~~~~~~~----------~~~~~~g~~---~~e~~~~~~~~~~~ 65 (191)
T PF06941_consen 2 KIRIAIDIDGVLADFNSAFIEWFN---EEFGKNPELTPEDITGY----------WDWEKWGIT---EPEFYEKLWRFYEE 65 (191)
T ss_dssp -EEEEEESBTTTB-HHHHHHHHHH---HHTTTS----GGGGTSS----------SHHHHHHHH---STTHHHHHHHHHTS
T ss_pred CcEEEEECCCCCcccHHHHHHHHH---HHcCCCCCCCHHHhhhh----------hHHHHhCCC---CHHHHHHHHHHHhC
Confidence 45 899999999999876555544 455554 333322100 011112111 01111222222211
Q ss_pred -hhcCCCCCCccHHHHHHHHHhCCCCEEEEeCChhh------HHHHHHhhh-hhhhhhcceeeeCCCCCccCCCCCHHHH
Q 026543 88 -TLFPTSELMPGASHLIRHLHAKGIPMCVATGSLAR------HFELKTQKH-RELFSLMHHVVRGDDPEVKQGKPSPDIF 159 (237)
Q Consensus 88 -~~~~~~~~~~~~~~~l~~l~~~g~~v~i~s~~~~~------~~~~~~~~~-~gl~~~f~~~~~~~~~~~~~~kp~~~~~ 159 (237)
.++...++.||+.++++.|.+.|..++++|.+... .....+++. ++...+-+.+++++ |
T Consensus 66 ~~~f~~l~p~~gA~e~l~~L~~~g~~~~~Itar~~~~~~~~~~~k~~Wl~~hf~~i~~~~~~~~~~-------K------ 132 (191)
T PF06941_consen 66 PGFFSNLPPIPGAVEALKKLRDKGHEIVIITARPPEFPDHSAEEKREWLERHFPFIPYDNLIFTGD-------K------ 132 (191)
T ss_dssp TTTTTT--B-TTHHHHHHHHHTSTTEEEEEEE-SSSSGCCCHHHHHHHHHHHHTHHHHCCEEEESS-------G------
T ss_pred hhhhcCCCccHHHHHHHHHHHHcCCcEEEEEecCccccchHHHHHHHHHHHHcCCCchheEEEecC-------C------
Confidence 24567899999999999999998777777765433 223344443 23222224444433 2
Q ss_pred HHHHHHcCCCCCCCCcEEEEecCHHHHHHHHHcCCeEEEEcCCCCCcccccchhhhhhhhcccCC
Q 026543 160 LAAAKRFEGGPIDSQEILVFEDAPSGVLAAKNAGMSVVMVPDPRLDSSYHSNADQLLSSLLGFNP 224 (237)
Q Consensus 160 ~~~l~~~~~~~~~~~~~~~igD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~~~~el~~ 224 (237)
..++ .+ ++|+|++..+..+...|+++|++..+.+.... ....+.++.|+..
T Consensus 133 ----~~v~---~D----vlIDD~~~n~~~~~~~g~~~iLfd~p~Nr~~~---~~~Rv~~W~ei~~ 183 (191)
T PF06941_consen 133 ----TLVG---GD----VLIDDRPHNLEQFANAGIPVILFDQPYNRDES---NFPRVNNWEEIED 183 (191)
T ss_dssp ----GGC-----S----EEEESSSHHHSS-SSESSEEEEE--GGGTT-----TSEEE-STTSHHH
T ss_pred ----CeEe---cc----EEecCChHHHHhccCCCceEEEEcCCCCCCCC---CCccCCCHHHHHH
Confidence 0234 33 89999999999999999999999887664322 4556677776543
|
5'(3')-deoxyribonucleotidase is a ubiquitous enzyme in mammalian cells whose physiological function is not known [].; GO: 0016791 phosphatase activity; PDB: 1Z4M_A 1Q92_A 1Q91_A 1Z4J_A 1Z4I_A 1Z4Q_A 1Z4K_A 2JAW_A 1MH9_A 1Z4L_A .... |
| >TIGR01684 viral_ppase viral phosphatase | Back alignment and domain information |
|---|
Probab=99.08 E-value=5e-10 Score=85.62 Aligned_cols=58 Identities=10% Similarity=0.133 Sum_probs=48.7
Q ss_pred CccHHHHHHHHHhCCCCEEEEeCChhhHHHHHHhhhhhhhhhcceeeeCCCCCccCCCCCH
Q 026543 96 MPGASHLIRHLHAKGIPMCVATGSLARHFELKTQKHRELFSLMHHVVRGDDPEVKQGKPSP 156 (237)
Q Consensus 96 ~~~~~~~l~~l~~~g~~v~i~s~~~~~~~~~~~~~~~gl~~~f~~~~~~~~~~~~~~kp~~ 156 (237)
.||+.++|+.|+++|++++|+|++...... ..++.+|+..+|+.+++++ +....||++
T Consensus 148 dPgV~EaL~~LkekGikLaIaTS~~Re~v~-~~L~~lGLd~YFdvIIs~G--dv~~~kp~~ 205 (301)
T TIGR01684 148 DPRIYDSLTELKKRGCILVLWSYGDRDHVV-ESMRKVKLDRYFDIIISGG--HKAEEYSTM 205 (301)
T ss_pred CHHHHHHHHHHHHCCCEEEEEECCCHHHHH-HHHHHcCCCcccCEEEECC--ccccCCCCc
Confidence 488999999999999999999998887766 5788899999999999887 555555555
|
These proteins also include an N-terminal domain (ca. 125 aas) that is unique to this clade. |
| >TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial | Back alignment and domain information |
|---|
Probab=99.06 E-value=2.6e-10 Score=87.02 Aligned_cols=60 Identities=12% Similarity=0.036 Sum_probs=48.1
Q ss_pred CccCCCCCHHHHHHHHHHcCCCCCCCCcEEEEecCHHHHHHHHHcCCeEEEEcCCCCCcccccchh
Q 026543 148 EVKQGKPSPDIFLAAAKRFEGGPIDSQEILVFEDAPSGVLAAKNAGMSVVMVPDPRLDSSYHSNAD 213 (237)
Q Consensus 148 ~~~~~kp~~~~~~~~l~~~~~~~~~~~~~~~igD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~ 213 (237)
..+.+++|+.+++.++++++ ++++++++|||+.||++|++.+|.. |..++..+..+..++
T Consensus 153 i~~~~~~K~~al~~l~~~~g---~~~~~~i~~GD~~nD~~ml~~~~~~---iav~na~~~~k~~a~ 212 (236)
T TIGR02471 153 VLPLRASKGLALRYLSYRWG---LPLEQILVAGDSGNDEEMLRGLTLG---VVVGNHDPELEGLRH 212 (236)
T ss_pred EeeCCCChHHHHHHHHHHhC---CCHHHEEEEcCCccHHHHHcCCCcE---EEEcCCcHHHHHhhc
Confidence 44567789999999999999 9999999999999999999999854 344555444444455
|
Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472. |
| >PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification [] | Back alignment and domain information |
|---|
Probab=99.05 E-value=1.9e-11 Score=93.98 Aligned_cols=65 Identities=17% Similarity=0.179 Sum_probs=53.7
Q ss_pred CCCCCHHHHHHHHHHcCCCCCCCCcEEEEecCHHHHHHHHHcCCeEEEEcCCCCCcccccchhhhhhhhcc
Q 026543 151 QGKPSPDIFLAAAKRFEGGPIDSQEILVFEDAPSGVLAAKNAGMSVVMVPDPRLDSSYHSNADQLLSSLLG 221 (237)
Q Consensus 151 ~~kp~~~~~~~~l~~~~~~~~~~~~~~~igD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~~~~e 221 (237)
.+..|..+++.+++.+| ++++++++|||+.||++|.+.+| ..|.++++.+..+..|++++.+-.+
T Consensus 183 ~~vsK~~ai~~l~~~~~---i~~~~~~~~GD~~ND~~Ml~~~~---~~~am~na~~~~k~~a~~i~~~~~~ 247 (254)
T PF08282_consen 183 KGVSKGSAIKYLLEYLG---ISPEDIIAFGDSENDIEMLELAG---YSVAMGNATPELKKAADYITPSNND 247 (254)
T ss_dssp TTSSHHHHHHHHHHHHT---TSGGGEEEEESSGGGHHHHHHSS---EEEEETTS-HHHHHHSSEEESSGTC
T ss_pred CCCCHHHHHHHHhhhcc---cccceeEEeecccccHhHHhhcC---eEEEEcCCCHHHHHhCCEEecCCCC
Confidence 44567899999999999 99999999999999999999999 5566677777777777777666554
|
This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A .... |
| >TIGR01525 ATPase-IB_hvy heavy metal translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=99.05 E-value=2.8e-10 Score=97.10 Aligned_cols=111 Identities=19% Similarity=0.168 Sum_probs=82.4
Q ss_pred CCCCCccHHHHHHHHHhCC-CCEEEEeCChhhHHHHHHhhhhhhhhhcceeeeCCCCCccCCCCCHHHHHHHHHHcCCCC
Q 026543 92 TSELMPGASHLIRHLHAKG-IPMCVATGSLARHFELKTQKHRELFSLMHHVVRGDDPEVKQGKPSPDIFLAAAKRFEGGP 170 (237)
Q Consensus 92 ~~~~~~~~~~~l~~l~~~g-~~v~i~s~~~~~~~~~~~~~~~gl~~~f~~~~~~~~~~~~~~kp~~~~~~~~l~~~~~~~ 170 (237)
..+++||+.++++.|+++| ++++++||.... ....+++.+|+..+|..+. |+....++++++
T Consensus 382 ~d~~~~g~~e~l~~L~~~g~i~v~ivTgd~~~-~a~~i~~~lgi~~~f~~~~-------------p~~K~~~v~~l~--- 444 (556)
T TIGR01525 382 RDQLRPEAKEAIAALKRAGGIKLVMLTGDNRS-AAEAVAAELGIDEVHAELL-------------PEDKLAIVKELQ--- 444 (556)
T ss_pred cccchHhHHHHHHHHHHcCCCeEEEEeCCCHH-HHHHHHHHhCCCeeeccCC-------------HHHHHHHHHHHH---
Confidence 3679999999999999999 999999995554 4556788888866665431 122345667776
Q ss_pred CCCCcEEEEecCHHHHHHHHHcCCeEEEEcCCCCCcccccchhhhhh--hhccc
Q 026543 171 IDSQEILVFEDAPSGVLAAKNAGMSVVMVPDPRLDSSYHSNADQLLS--SLLGF 222 (237)
Q Consensus 171 ~~~~~~~~igD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~--~~~el 222 (237)
..+.+++||||+.||+++++++| ++++++...+.....+|+++. ++..+
T Consensus 445 ~~~~~v~~vGDg~nD~~al~~A~---vgia~g~~~~~~~~~Ad~vi~~~~~~~l 495 (556)
T TIGR01525 445 EEGGVVAMVGDGINDAPALAAAD---VGIAMGAGSDVAIEAADIVLLNDDLSSL 495 (556)
T ss_pred HcCCEEEEEECChhHHHHHhhCC---EeEEeCCCCHHHHHhCCEEEeCCCHHHH
Confidence 66779999999999999999999 667766544444556777766 44443
|
This alignment encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512. |
| >TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase | Back alignment and domain information |
|---|
Probab=99.02 E-value=3.6e-09 Score=81.35 Aligned_cols=51 Identities=14% Similarity=0.204 Sum_probs=43.6
Q ss_pred CccCCCCCHHHHHHHHHHcCCCCCCCCcEEEEecCHHHHHHHHHcCCeEEEEcC
Q 026543 148 EVKQGKPSPDIFLAAAKRFEGGPIDSQEILVFEDAPSGVLAAKNAGMSVVMVPD 201 (237)
Q Consensus 148 ~~~~~kp~~~~~~~~l~~~~~~~~~~~~~~~igD~~~Di~~a~~~G~~~i~v~~ 201 (237)
....+.+|..++++++++++ ++++++++|||+.||++|++.++..++.+..
T Consensus 161 i~~~~~~K~~al~~l~~~~~---i~~~~~i~~GD~~ND~~ml~~~~~~~va~~n 211 (249)
T TIGR01485 161 ILPQGSGKGQALQYLLQKLA---MEPSQTLVCGDSGNDIELFEIGSVRGVIVSN 211 (249)
T ss_pred EEeCCCChHHHHHHHHHHcC---CCccCEEEEECChhHHHHHHccCCcEEEECC
Confidence 34567889999999999999 9999999999999999999996655566643
|
Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain. |
| >TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family | Back alignment and domain information |
|---|
Probab=98.97 E-value=3.4e-08 Score=76.29 Aligned_cols=50 Identities=12% Similarity=0.137 Sum_probs=42.4
Q ss_pred cCCCCCHHHHHHHHHHcCCCCCC--CCcEEEEecCHHHHHHHHHcCCeEEEEcCCCCC
Q 026543 150 KQGKPSPDIFLAAAKRFEGGPID--SQEILVFEDAPSGVLAAKNAGMSVVMVPDPRLD 205 (237)
Q Consensus 150 ~~~kp~~~~~~~~l~~~~~~~~~--~~~~~~igD~~~Di~~a~~~G~~~i~v~~~~~~ 205 (237)
+.+..|..++++++++++ ++ .+++++|||+.||++|.+.+| ..|.++++.
T Consensus 172 ~~~~~Kg~ai~~l~~~~~---i~~~~~~~~a~GD~~ND~~Ml~~ag---~~vam~Na~ 223 (256)
T TIGR01486 172 GAGSDKGKAANALKQFYN---QPGGAIKVVGLGDSPNDLPLLEVVD---LAVVVPGPN 223 (256)
T ss_pred cCCCCHHHHHHHHHHHHh---hcCCCceEEEEcCCHhhHHHHHHCC---EEEEeCCCC
Confidence 345667889999999999 99 999999999999999999999 455555553
|
This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta |
| >KOG2630 consensus Enolase-phosphatase E-1 [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.96 E-value=4.8e-08 Score=71.27 Aligned_cols=118 Identities=14% Similarity=0.160 Sum_probs=87.2
Q ss_pred CCCCccHHHHHHHHHhCCCCEEEEeCChhhHHHHHHhhh---hhh----hhhcceeeeCCCCCccCCCCCHHHHHHHHHH
Q 026543 93 SELMPGASHLIRHLHAKGIPMCVATGSLARHFELKTQKH---REL----FSLMHHVVRGDDPEVKQGKPSPDIFLAAAKR 165 (237)
Q Consensus 93 ~~~~~~~~~~l~~l~~~g~~v~i~s~~~~~~~~~~~~~~---~gl----~~~f~~~~~~~~~~~~~~kp~~~~~~~~l~~ 165 (237)
.+.++++...++..+..|++++|.|.++...... +..+ ..+ ..|||.-+ + .|-....|..+.+.
T Consensus 122 ~~v~aDv~~a~e~w~~~g~~vyIYSSgsv~AqKl-lfg~s~~gdl~~y~~gyfDt~i-------G-~K~e~~sy~~I~~~ 192 (254)
T KOG2630|consen 122 AHVYADVLPAIERWSGEGVRVYIYSSGSVAAQKL-LFGYSDAGDLRKYISGYFDTTI-------G-LKVESQSYKKIGHL 192 (254)
T ss_pred ccccchhHHHHHHHhhcCceEEEEcCCcHHHHHH-HHcccCcchHHHHhhhhhhccc-------c-ceehhHHHHHHHHH
Confidence 4789999999999999999999999977764432 2222 122 33444432 2 35567889999999
Q ss_pred cCCCCCCCCcEEEEecCHHHHHHHHHcCCeEEEEcCCCCCcccccch--hhhhhhhccc
Q 026543 166 FEGGPIDSQEILVFEDAPSGVLAAKNAGMSVVMVPDPRLDSSYHSNA--DQLLSSLLGF 222 (237)
Q Consensus 166 ~~~~~~~~~~~~~igD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~--~~~~~~~~el 222 (237)
++ .++.+++|+-|-.....+|+.+|+.+..+.++.+........ --++.+|+.+
T Consensus 193 Ig---~s~~eiLfLTd~~~Ea~aa~~aGl~a~l~~rPgna~l~dd~~~~y~~i~~F~~l 248 (254)
T KOG2630|consen 193 IG---KSPREILFLTDVPREAAAARKAGLQAGLVSRPGNAPLPDDAKVEYCVIWSFEIL 248 (254)
T ss_pred hC---CChhheEEeccChHHHHHHHhcccceeeeecCCCCCCCcccccceeeeccchhh
Confidence 99 999999999999999999999999998888877744322222 3455666554
|
|
| >TIGR01511 ATPase-IB1_Cu copper-(or silver)-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=98.93 E-value=2.5e-09 Score=91.25 Aligned_cols=109 Identities=20% Similarity=0.179 Sum_probs=78.5
Q ss_pred CCCCccHHHHHHHHHhCCCCEEEEeCChhhHHHHHHhhhhhhhhhcceeeeCCCCCccCCCCCHHHHHHHHHHcCCCCCC
Q 026543 93 SELMPGASHLIRHLHAKGIPMCVATGSLARHFELKTQKHRELFSLMHHVVRGDDPEVKQGKPSPDIFLAAAKRFEGGPID 172 (237)
Q Consensus 93 ~~~~~~~~~~l~~l~~~g~~v~i~s~~~~~~~~~~~~~~~gl~~~f~~~~~~~~~~~~~~kp~~~~~~~~l~~~~~~~~~ 172 (237)
.+++|++.++++.|+++|++++++|+.... ....+.+.+|+. ++ .+ . + |+....+++++. .+
T Consensus 404 d~l~~~a~e~i~~Lk~~Gi~v~ilSgd~~~-~a~~ia~~lgi~-----~~-~~--~----~--p~~K~~~v~~l~---~~ 465 (562)
T TIGR01511 404 DQLRPEAKEVIQALKRRGIEPVMLTGDNRK-TAKAVAKELGIN-----VR-AE--V----L--PDDKAALIKELQ---EK 465 (562)
T ss_pred ccccHHHHHHHHHHHHcCCeEEEEcCCCHH-HHHHHHHHcCCc-----EE-cc--C----C--hHHHHHHHHHHH---Hc
Confidence 568999999999999999999999995554 455678888874 22 22 1 1 223345666666 66
Q ss_pred CCcEEEEecCHHHHHHHHHcCCeEEEEcCCCCCcccccchhhhh--hhhccc
Q 026543 173 SQEILVFEDAPSGVLAAKNAGMSVVMVPDPRLDSSYHSNADQLL--SSLLGF 222 (237)
Q Consensus 173 ~~~~~~igD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~--~~~~el 222 (237)
+++|+||||+.||+++++++|+ ++.++...+.....+|.++ +++.++
T Consensus 466 ~~~v~~VGDg~nD~~al~~A~v---gia~g~g~~~a~~~Advvl~~~~l~~l 514 (562)
T TIGR01511 466 GRVVAMVGDGINDAPALAQADV---GIAIGAGTDVAIEAADVVLMRNDLNDV 514 (562)
T ss_pred CCEEEEEeCCCccHHHHhhCCE---EEEeCCcCHHHHhhCCEEEeCCCHHHH
Confidence 7899999999999999999994 5666655444455677666 355544
|
One member from Halobacterium is annotated as "molybdenum-binding protein" although no evidence can be found for this classification. |
| >TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase | Back alignment and domain information |
|---|
Probab=98.91 E-value=2.4e-09 Score=80.88 Aligned_cols=43 Identities=7% Similarity=0.114 Sum_probs=36.0
Q ss_pred CCCCHHHHHHHHHHcCCCCC--CCCcEEEEecCHHHHHHHHHcCCeEE
Q 026543 152 GKPSPDIFLAAAKRFEGGPI--DSQEILVFEDAPSGVLAAKNAGMSVV 197 (237)
Q Consensus 152 ~kp~~~~~~~~l~~~~~~~~--~~~~~~~igD~~~Di~~a~~~G~~~i 197 (237)
+-.++.+...+++.++ + ++.++++|||+.||++|.+.+|+.++
T Consensus 179 ~~sK~~al~~l~~~~~---~~~~~~~~i~~GD~~nD~~ml~~ag~~v~ 223 (225)
T TIGR02461 179 GSDKGKAIKRLLDLYK---LRPGAIESVGLGDSENDFPMFEVVDLAFL 223 (225)
T ss_pred CCCHHHHHHHHHHHhc---cccCcccEEEEcCCHHHHHHHHhCCCcEe
Confidence 4445788888888887 5 67799999999999999999997644
|
Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles. |
| >TIGR02251 HIF-SF_euk Dullard-like phosphatase domain | Back alignment and domain information |
|---|
Probab=98.91 E-value=7e-10 Score=79.34 Aligned_cols=99 Identities=6% Similarity=0.064 Sum_probs=81.3
Q ss_pred CCCCCccHHHHHHHHHhCCCCEEEEeCChhhHHHHHHhhhhhhhh-hcceeeeCCCCCccCCCCCHHHHHHHHHHcCCCC
Q 026543 92 TSELMPGASHLIRHLHAKGIPMCVATGSLARHFELKTQKHRELFS-LMHHVVRGDDPEVKQGKPSPDIFLAAAKRFEGGP 170 (237)
Q Consensus 92 ~~~~~~~~~~~l~~l~~~g~~v~i~s~~~~~~~~~~~~~~~gl~~-~f~~~~~~~~~~~~~~kp~~~~~~~~l~~~~~~~ 170 (237)
.+...||+.++|..|.+. +.++|.|++...+.. .+++.++... +|+.+++.+ .....+++ +.+.++.+|
T Consensus 40 ~v~~RPgl~eFL~~l~~~-yei~I~Ts~~~~yA~-~il~~ldp~~~~f~~~l~r~--~~~~~~~~---~~K~L~~l~--- 109 (162)
T TIGR02251 40 YVFKRPHVDEFLERVSKW-YELVIFTASLEEYAD-PVLDILDRGGKVISRRLYRE--SCVFTNGK---YVKDLSLVG--- 109 (162)
T ss_pred EEEECCCHHHHHHHHHhc-CEEEEEcCCcHHHHH-HHHHHHCcCCCEEeEEEEcc--ccEEeCCC---EEeEchhcC---
Confidence 377999999999999988 999999997776555 5778777665 888888887 44444444 677888899
Q ss_pred CCCCcEEEEecCHHHHHHHHHcCCeEEEEc
Q 026543 171 IDSQEILVFEDAPSGVLAAKNAGMSVVMVP 200 (237)
Q Consensus 171 ~~~~~~~~igD~~~Di~~a~~~G~~~i~v~ 200 (237)
.+++++++|||++.++.++..+|+.+....
T Consensus 110 ~~~~~vIiVDD~~~~~~~~~~NgI~i~~f~ 139 (162)
T TIGR02251 110 KDLSKVIIIDNSPYSYSLQPDNAIPIKSWF 139 (162)
T ss_pred CChhhEEEEeCChhhhccCccCEeecCCCC
Confidence 999999999999999999999997655554
|
This domain is related to domains found in FCP1-like phosphatases (TIGR02250), and together both are detected by the Pfam model pfam03031. |
| >TIGR01522 ATPase-IIA2_Ca golgi membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=98.90 E-value=2.3e-09 Score=96.06 Aligned_cols=123 Identities=16% Similarity=0.189 Sum_probs=93.7
Q ss_pred CCCCccHHHHHHHHHhCCCCEEEEeCChhhHHHHHHhhhhhhhhhcceeeeCCCCCc----------------cCCCCCH
Q 026543 93 SELMPGASHLIRHLHAKGIPMCVATGSLARHFELKTQKHRELFSLMHHVVRGDDPEV----------------KQGKPSP 156 (237)
Q Consensus 93 ~~~~~~~~~~l~~l~~~g~~v~i~s~~~~~~~~~~~~~~~gl~~~f~~~~~~~~~~~----------------~~~kp~~ 156 (237)
.++.|++.+.++.|++.|++++++|+ +.......+.+.+|+...++.++++. +. -.....|
T Consensus 527 Dp~r~~~~~~i~~l~~~Gi~v~miTG-D~~~tA~~ia~~~Gi~~~~~~~v~g~--~l~~~~~~~l~~~~~~~~Vfar~~P 603 (884)
T TIGR01522 527 DPPRPGVKEAVTTLITGGVRIIMITG-DSQETAVSIARRLGMPSKTSQSVSGE--KLDAMDDQQLSQIVPKVAVFARASP 603 (884)
T ss_pred CcchhHHHHHHHHHHHCCCeEEEECC-CCHHHHHHHHHHcCCCCCCCceeEhH--HhHhCCHHHHHHHhhcCeEEEECCH
Confidence 37899999999999999999999999 44445556788889877666665554 22 2334677
Q ss_pred HHHHHHHHHcCCCCCCCCcEEEEecCHHHHHHHHHcCCeEEEEcCCC-CCcccccchhhhh--hhhcccCC
Q 026543 157 DIFLAAAKRFEGGPIDSQEILVFEDAPSGVLAAKNAGMSVVMVPDPR-LDSSYHSNADQLL--SSLLGFNP 224 (237)
Q Consensus 157 ~~~~~~l~~~~~~~~~~~~~~~igD~~~Di~~a~~~G~~~i~v~~~~-~~~~~~~~~~~~~--~~~~el~~ 224 (237)
+....+.+.+. -..+.+.|+||+.||+.+++.|+ ++|+.|. ..+..+..+|.++ ++++.+..
T Consensus 604 ~~K~~iv~~lq---~~g~~v~mvGDGvND~pAl~~Ad---VGia~g~~g~~va~~aaDivl~dd~~~~i~~ 668 (884)
T TIGR01522 604 EHKMKIVKALQ---KRGDVVAMTGDGVNDAPALKLAD---IGVAMGQTGTDVAKEAADMILTDDDFATILS 668 (884)
T ss_pred HHHHHHHHHHH---HCCCEEEEECCCcccHHHHHhCC---eeEecCCCcCHHHHHhcCEEEcCCCHHHHHH
Confidence 78888888887 67789999999999999999999 6777764 3444456778877 55766543
|
The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116. |
| >COG4087 Soluble P-type ATPase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.89 E-value=9.1e-09 Score=68.23 Aligned_cols=121 Identities=13% Similarity=0.230 Sum_probs=93.5
Q ss_pred CCCCccHHHHHHHHHhCCCCEEEEeCChhhHHHHHHhhhhhhhhhcceeeeCCCCCccCCCCCHHHHHHHHHHcCCCCCC
Q 026543 93 SELMPGASHLIRHLHAKGIPMCVATGSLARHFELKTQKHRELFSLMHHVVRGDDPEVKQGKPSPDIFLAAAKRFEGGPID 172 (237)
Q Consensus 93 ~~~~~~~~~~l~~l~~~g~~v~i~s~~~~~~~~~~~~~~~gl~~~f~~~~~~~~~~~~~~kp~~~~~~~~l~~~~~~~~~ 172 (237)
-.+++.+.+.++.|+.. ++++|.|+ ++.-....+++..|+. .+.++.+. .++....+++.++ -+
T Consensus 29 Gklf~ev~e~iqeL~d~-V~i~IASg-Dr~gsl~~lae~~gi~--~~rv~a~a---------~~e~K~~ii~eLk---k~ 92 (152)
T COG4087 29 GKLFSEVSETIQELHDM-VDIYIASG-DRKGSLVQLAEFVGIP--VERVFAGA---------DPEMKAKIIRELK---KR 92 (152)
T ss_pred cEEcHhhHHHHHHHHHh-heEEEecC-CcchHHHHHHHHcCCc--eeeeeccc---------CHHHHHHHHHHhc---CC
Confidence 46889999999999999 99999998 4444444566665542 34555444 4677889999999 77
Q ss_pred CCcEEEEecCHHHHHHHHHcCCeEEEEcCCCCCcccccchhhhhhhhcccCCCCCCC
Q 026543 173 SQEILVFEDAPSGVLAAKNAGMSVVMVPDPRLDSSYHSNADQLLSSLLGFNPKDWGL 229 (237)
Q Consensus 173 ~~~~~~igD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~~~~el~~~l~~l 229 (237)
.+.++||||+.||+.+.+++....+-+.....++.....+|.++.+..|+...+..+
T Consensus 93 ~~k~vmVGnGaND~laLr~ADlGI~tiq~e~v~~r~l~~ADvvik~i~e~ldl~~~~ 149 (152)
T COG4087 93 YEKVVMVGNGANDILALREADLGICTIQQEGVPERLLLTADVVLKEIAEILDLLKDT 149 (152)
T ss_pred CcEEEEecCCcchHHHhhhcccceEEeccCCcchHHHhhchhhhhhHHHHHHHhhcc
Confidence 799999999999999999998877777665556555678999999998887665443
|
|
| >PHA03398 viral phosphatase superfamily protein; Provisional | Back alignment and domain information |
|---|
Probab=98.82 E-value=2.3e-08 Score=76.68 Aligned_cols=86 Identities=15% Similarity=0.191 Sum_probs=65.3
Q ss_pred CccHHHHHHHHHhCCCCEEEEeCChhhHHHHHHhhhhhhhhhcceeeeCCCC---------------------------C
Q 026543 96 MPGASHLIRHLHAKGIPMCVATGSLARHFELKTQKHRELFSLMHHVVRGDDP---------------------------E 148 (237)
Q Consensus 96 ~~~~~~~l~~l~~~g~~v~i~s~~~~~~~~~~~~~~~gl~~~f~~~~~~~~~---------------------------~ 148 (237)
.|++.++|+.|+++|++++|+||+...... ..++..|+..+|+.++++++. +
T Consensus 150 dp~V~EtL~eLkekGikLaIvTNg~Re~v~-~~Le~lgL~~yFDvII~~g~i~~k~~~~~~~d~~~~~~~~~~~f~~d~~ 228 (303)
T PHA03398 150 DPFVYDSLDELKERGCVLVLWSYGNREHVV-HSLKETKLEGYFDIIICGGRKAGEYSRRVIVDNKYKMVFVKKPFYLDVT 228 (303)
T ss_pred ChhHHHHHHHHHHCCCEEEEEcCCChHHHH-HHHHHcCCCccccEEEECCCcccccccceeecccceeEEecCceeEeCC
Confidence 488889999999999999999998777665 578889999999988876510 0
Q ss_pred c--cCCCCCHHHHHHHHHHcCCCCCCC-CcEEEEecCH-HHH
Q 026543 149 V--KQGKPSPDIFLAAAKRFEGGPIDS-QEILVFEDAP-SGV 186 (237)
Q Consensus 149 ~--~~~kp~~~~~~~~l~~~~~~~~~~-~~~~~igD~~-~Di 186 (237)
. .-+| +|....+.|++.| +.. +.+..|+|=. ||+
T Consensus 229 ~~~~lPK-SprvVl~yL~~~g---vn~~KtiTLVDDl~~Nn~ 266 (303)
T PHA03398 229 DVKNLPK-SPRVVLWYLRKKG---VNYFKTITLVDDLKSNNY 266 (303)
T ss_pred cccCCCC-CCeehHHHHHHcC---cceeccEEEeccCcccCc
Confidence 0 1112 5677888999999 775 5677778776 554
|
|
| >TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459 | Back alignment and domain information |
|---|
Probab=98.80 E-value=1.3e-08 Score=78.01 Aligned_cols=93 Identities=20% Similarity=0.321 Sum_probs=74.4
Q ss_pred CCCCCccHHHHHHHHHhCCCCEEEEeCChhhHHH-HHHhhhhhhhh-hcceeeeCCCCCccCCCCCHHHHHHHHHHcCCC
Q 026543 92 TSELMPGASHLIRHLHAKGIPMCVATGSLARHFE-LKTQKHRELFS-LMHHVVRGDDPEVKQGKPSPDIFLAAAKRFEGG 169 (237)
Q Consensus 92 ~~~~~~~~~~~l~~l~~~g~~v~i~s~~~~~~~~-~~~~~~~gl~~-~f~~~~~~~~~~~~~~kp~~~~~~~~l~~~~~~ 169 (237)
...++||+.++|+.|+++|++++++||+...... ...++.+|+.. +|+.++++. ... ...+...+++++
T Consensus 22 ~~~~~pga~e~L~~L~~~G~~~~ivTN~~~~~~~~~~~L~~~gl~~~~~~~Ii~s~--~~~-----~~~l~~~~~~~~-- 92 (242)
T TIGR01459 22 GNHTYPGAVQNLNKIIAQGKPVYFVSNSPRNIFSLHKTLKSLGINADLPEMIISSG--EIA-----VQMILESKKRFD-- 92 (242)
T ss_pred CCccCccHHHHHHHHHHCCCEEEEEeCCCCChHHHHHHHHHCCCCccccceEEccH--HHH-----HHHHHhhhhhcc--
Confidence 4668999999999999999999999997665432 14578889987 899999887 332 245666778888
Q ss_pred CCCCCcEEEEecCHHHHHHHHHcCC
Q 026543 170 PIDSQEILVFEDAPSGVLAAKNAGM 194 (237)
Q Consensus 170 ~~~~~~~~~igD~~~Di~~a~~~G~ 194 (237)
.+++++++|||+..|++....+|.
T Consensus 93 -~~~~~~~~vGd~~~d~~~~~~~~~ 116 (242)
T TIGR01459 93 -IRNGIIYLLGHLENDIINLMQCYT 116 (242)
T ss_pred -CCCceEEEeCCcccchhhhcCCCc
Confidence 899999999999999887766554
|
This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily) |
| >PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.76 E-value=6.7e-07 Score=76.30 Aligned_cols=45 Identities=11% Similarity=0.194 Sum_probs=40.0
Q ss_pred CCCCCHHHHHHHHHHcCCCCCCCCcEEEE--ecCHHHHHHHHHcCCeEEE
Q 026543 151 QGKPSPDIFLAAAKRFEGGPIDSQEILVF--EDAPSGVLAAKNAGMSVVM 198 (237)
Q Consensus 151 ~~kp~~~~~~~~l~~~~~~~~~~~~~~~i--gD~~~Di~~a~~~G~~~i~ 198 (237)
.+..|..+++++++.++ ++.++++.| ||+.||++|.+.+|..+++
T Consensus 610 ~gvdKG~AL~~L~e~~g---I~~~eViafalGDs~NDisMLe~Ag~gVAM 656 (694)
T PRK14502 610 GGNDKGKAIKILNELFR---LNFGNIHTFGLGDSENDYSMLETVDSPILV 656 (694)
T ss_pred CCCCHHHHHHHHHHHhC---CCccceEEEEcCCcHhhHHHHHhCCceEEE
Confidence 35567899999999999 999999999 9999999999999987555
|
|
| >COG4996 Predicted phosphatase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.74 E-value=4.1e-08 Score=65.15 Aligned_cols=93 Identities=13% Similarity=0.171 Sum_probs=68.3
Q ss_pred CCCCCccHHHHHHHHHhCCCCEEEEeCChhhHHHHHHhhhhhhhhhcceeeeCCCCCccCCCCCHHHHHHHHHHcCC---
Q 026543 92 TSELMPGASHLIRHLHAKGIPMCVATGSLARHFELKTQKHRELFSLMHHVVRGDDPEVKQGKPSPDIFLAAAKRFEG--- 168 (237)
Q Consensus 92 ~~~~~~~~~~~l~~l~~~g~~v~i~s~~~~~~~~~~~~~~~gl~~~f~~~~~~~~~~~~~~kp~~~~~~~~l~~~~~--- 168 (237)
.+.+++.+++++.+++..|+.+..+|=+.... ..+.++.+++..+|+.++.-. . +. +..++.+++.+++.
T Consensus 39 ev~L~~~v~~~l~warnsG~i~~~~sWN~~~k-A~~aLral~~~~yFhy~VieP--h--P~--K~~ML~~llr~i~~er~ 111 (164)
T COG4996 39 EVHLFPDVKETLKWARNSGYILGLASWNFEDK-AIKALRALDLLQYFHYIVIEP--H--PY--KFLMLSQLLREINTERN 111 (164)
T ss_pred EEEEcHHHHHHHHHHHhCCcEEEEeecCchHH-HHHHHHHhchhhhEEEEEecC--C--Ch--hHHHHHHHHHHHHHhhc
Confidence 47899999999999999999999998644443 335688889999999988554 1 11 24556666665541
Q ss_pred CCCCCCcEEEEecCHHHHHHHHH
Q 026543 169 GPIDSQEILVFEDAPSGVLAAKN 191 (237)
Q Consensus 169 ~~~~~~~~~~igD~~~Di~~a~~ 191 (237)
..+.|.+++|++|+.-.+.-...
T Consensus 112 ~~ikP~~Ivy~DDR~iH~~~Iwe 134 (164)
T COG4996 112 QKIKPSEIVYLDDRRIHFGNIWE 134 (164)
T ss_pred cccCcceEEEEecccccHHHHHH
Confidence 23899999999999855544443
|
|
| >PRK10671 copA copper exporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=98.73 E-value=3.1e-08 Score=88.55 Aligned_cols=110 Identities=18% Similarity=0.183 Sum_probs=79.2
Q ss_pred CCCCccHHHHHHHHHhCCCCEEEEeCChhhHHHHHHhhhhhhhhhcceeeeCCCCCccCCCCCHHHHHHHHHHcCCCCCC
Q 026543 93 SELMPGASHLIRHLHAKGIPMCVATGSLARHFELKTQKHRELFSLMHHVVRGDDPEVKQGKPSPDIFLAAAKRFEGGPID 172 (237)
Q Consensus 93 ~~~~~~~~~~l~~l~~~g~~v~i~s~~~~~~~~~~~~~~~gl~~~f~~~~~~~~~~~~~~kp~~~~~~~~l~~~~~~~~~ 172 (237)
.+++|++.+.++.|++.|++++++|+.... ....+.+.+|+..+|..+ .|+....++++++ ..
T Consensus 649 d~~r~~a~~~i~~L~~~gi~v~~~Tgd~~~-~a~~ia~~lgi~~~~~~~-------------~p~~K~~~i~~l~---~~ 711 (834)
T PRK10671 649 DPLRSDSVAALQRLHKAGYRLVMLTGDNPT-TANAIAKEAGIDEVIAGV-------------LPDGKAEAIKRLQ---SQ 711 (834)
T ss_pred CcchhhHHHHHHHHHHCCCeEEEEcCCCHH-HHHHHHHHcCCCEEEeCC-------------CHHHHHHHHHHHh---hc
Confidence 478999999999999999999999995544 444678888875433221 1334566888888 78
Q ss_pred CCcEEEEecCHHHHHHHHHcCCeEEEEcCCCCCcccccch--hhhhhhhccc
Q 026543 173 SQEILVFEDAPSGVLAAKNAGMSVVMVPDPRLDSSYHSNA--DQLLSSLLGF 222 (237)
Q Consensus 173 ~~~~~~igD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~--~~~~~~~~el 222 (237)
+++++||||+.||+++++.+|+ +|.+++..+.....+ ....++++++
T Consensus 712 ~~~v~~vGDg~nD~~al~~Agv---gia~g~g~~~a~~~ad~vl~~~~~~~i 760 (834)
T PRK10671 712 GRQVAMVGDGINDAPALAQADV---GIAMGGGSDVAIETAAITLMRHSLMGV 760 (834)
T ss_pred CCEEEEEeCCHHHHHHHHhCCe---eEEecCCCHHHHHhCCEEEecCCHHHH
Confidence 8899999999999999999995 666665543333333 3344555554
|
|
| >PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A | Back alignment and domain information |
|---|
Probab=98.72 E-value=1.3e-07 Score=62.04 Aligned_cols=85 Identities=18% Similarity=0.204 Sum_probs=53.6
Q ss_pred CCCccHHHHHHHHHhCCCCEEEEeCChhhHH--HHHHhhhhhhhhhcceeeeCCCCCccCCCCCHHHHHHHHHHcCCCCC
Q 026543 94 ELMPGASHLIRHLHAKGIPMCVATGSLARHF--ELKTQKHRELFSLMHHVVRGDDPEVKQGKPSPDIFLAAAKRFEGGPI 171 (237)
Q Consensus 94 ~~~~~~~~~l~~l~~~g~~v~i~s~~~~~~~--~~~~~~~~gl~~~f~~~~~~~~~~~~~~kp~~~~~~~~l~~~~~~~~ 171 (237)
.+.||+.++++.|+++|.+++++||++.... ....++.+|+....+.++++. ......+++..
T Consensus 14 ~~ipga~e~l~~L~~~g~~~~~lTNns~~s~~~~~~~L~~~Gi~~~~~~i~ts~-----------~~~~~~l~~~~---- 78 (101)
T PF13344_consen 14 EPIPGAVEALDALRERGKPVVFLTNNSSRSREEYAKKLKKLGIPVDEDEIITSG-----------MAAAEYLKEHK---- 78 (101)
T ss_dssp EE-TTHHHHHHHHHHTTSEEEEEES-SSS-HHHHHHHHHHTTTT--GGGEEEHH-----------HHHHHHHHHHT----
T ss_pred CcCcCHHHHHHHHHHcCCCEEEEeCCCCCCHHHHHHHHHhcCcCCCcCEEEChH-----------HHHHHHHHhcC----
Confidence 4899999999999999999999999764331 122346677776666676554 23444444422
Q ss_pred CCCcEEEEecCHHHHHHHHHcCC
Q 026543 172 DSQEILVFEDAPSGVLAAKNAGM 194 (237)
Q Consensus 172 ~~~~~~~igD~~~Di~~a~~~G~ 194 (237)
...+++++|-. ...+.++.+|+
T Consensus 79 ~~~~v~vlG~~-~l~~~l~~~G~ 100 (101)
T PF13344_consen 79 GGKKVYVLGSD-GLREELREAGF 100 (101)
T ss_dssp TSSEEEEES-H-HHHHHHHHTTE
T ss_pred CCCEEEEEcCH-HHHHHHHHcCC
Confidence 35678888755 55566666664
|
... |
| >smart00775 LNS2 LNS2 domain | Back alignment and domain information |
|---|
Probab=98.70 E-value=2.8e-07 Score=65.54 Aligned_cols=98 Identities=14% Similarity=0.128 Sum_probs=58.3
Q ss_pred CCccHHHHHHHHHhCCCCEEEEeCChhhHHH--HHHhhhh---hhhhhcceeeeCCCCCc-------cCCCC---CHHHH
Q 026543 95 LMPGASHLIRHLHAKGIPMCVATGSLARHFE--LKTQKHR---ELFSLMHHVVRGDDPEV-------KQGKP---SPDIF 159 (237)
Q Consensus 95 ~~~~~~~~l~~l~~~g~~v~i~s~~~~~~~~--~~~~~~~---gl~~~f~~~~~~~~~~~-------~~~kp---~~~~~ 159 (237)
..|++.++++.++++|++++++|++...... ..+++.+ |..-....+++.+.... ...+| +...+
T Consensus 28 ~~~~~~~a~~~l~~~G~~ivy~TGRp~~~~~~t~~~l~~~~~~~~~lp~g~li~~~g~~~~~~~~e~i~~~~~~~K~~~l 107 (157)
T smart00775 28 THPGVAKLYRDIQNNGYKILYLTARPIGQADRTRSYLSQIKQDGHNLPHGPVLLSPDRLFAALHREVISKKPEVFKIACL 107 (157)
T ss_pred CCHHHHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHHHHHhhhccccCCCceEEEcCCcchhhhhcccccCCHHHHHHHHH
Confidence 4689999999999999999999997765542 2344431 11111124444431111 12233 33344
Q ss_pred HHHHHHcCCCCCCCCcE-EEEecCHHHHHHHHHcCCe
Q 026543 160 LAAAKRFEGGPIDSQEI-LVFEDAPSGVLAAKNAGMS 195 (237)
Q Consensus 160 ~~~l~~~~~~~~~~~~~-~~igD~~~Di~~a~~~G~~ 195 (237)
..+.+.+. -..-.. ..+||+.+|+++=+++|+.
T Consensus 108 ~~i~~~~~---~~~~~f~~~~gn~~~D~~~y~~~gi~ 141 (157)
T smart00775 108 RDIKSLFP---PQGNPFYAGFGNRITDVISYSAVGIP 141 (157)
T ss_pred HHHHHhcC---CCCCCEEEEeCCCchhHHHHHHcCCC
Confidence 45554443 222233 3478889999999999986
|
This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins. SMP2 is involved in plasmid maintenance and respiration. Lipin proteins are involved in adipose tissue development and insulin resistance. |
| >PRK10187 trehalose-6-phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.70 E-value=2.5e-08 Score=77.28 Aligned_cols=66 Identities=11% Similarity=-0.001 Sum_probs=48.0
Q ss_pred CCCCCHHHHHHHHHHcCCCCCCCCcEEEEecCHHHHHHHHHc----CCeEEEEcCCCCCcccccchhhhhhhhcccCCCC
Q 026543 151 QGKPSPDIFLAAAKRFEGGPIDSQEILVFEDAPSGVLAAKNA----GMSVVMVPDPRLDSSYHSNADQLLSSLLGFNPKD 226 (237)
Q Consensus 151 ~~kp~~~~~~~~l~~~~~~~~~~~~~~~igD~~~Di~~a~~~----G~~~i~v~~~~~~~~~~~~~~~~~~~~~el~~~l 226 (237)
.+..|..++++++++++ +..+++++|||+.||..|.+.+ | ..|..++. ...|.+.+++..++..+|
T Consensus 171 ~g~~Kg~al~~ll~~~~---~~~~~v~~~GD~~nD~~mf~~~~~~~g---~~vavg~a----~~~A~~~l~~~~~v~~~L 240 (266)
T PRK10187 171 RGTNKGEAIAAFMQEAP---FAGRTPVFVGDDLTDEAGFAVVNRLGG---ISVKVGTG----ATQASWRLAGVPDVWSWL 240 (266)
T ss_pred CCCCHHHHHHHHHHhcC---CCCCeEEEEcCCccHHHHHHHHHhcCC---eEEEECCC----CCcCeEeCCCHHHHHHHH
Confidence 44567899999999999 9999999999999999999998 5 33444444 233455555555554443
|
|
| >PLN02382 probable sucrose-phosphatase | Back alignment and domain information |
|---|
Probab=98.68 E-value=1.6e-07 Score=77.04 Aligned_cols=50 Identities=18% Similarity=0.116 Sum_probs=40.7
Q ss_pred CCCCCHHHHHHHHHHc---CCCCCCCCcEEEEecCHHHHHHHHHcCCeEEEEcCCCCC
Q 026543 151 QGKPSPDIFLAAAKRF---EGGPIDSQEILVFEDAPSGVLAAKNAGMSVVMVPDPRLD 205 (237)
Q Consensus 151 ~~kp~~~~~~~~l~~~---~~~~~~~~~~~~igD~~~Di~~a~~~G~~~i~v~~~~~~ 205 (237)
.+-.|..+++.+++++ | ++++++++|||+.||++|.+.+|...+.+ +++.
T Consensus 172 ~g~sKg~Al~~L~~~~~~~g---i~~~~~iafGDs~NDleMl~~ag~~gvam--~NA~ 224 (413)
T PLN02382 172 QGAGKGQALAYLLKKLKAEG---KAPVNTLVCGDSGNDAELFSVPDVYGVMV--SNAQ 224 (413)
T ss_pred CCCCHHHHHHHHHHHhhhcC---CChhcEEEEeCCHHHHHHHhcCCCCEEEE--cCCc
Confidence 4455789999999999 8 99999999999999999999999533333 4443
|
|
| >COG3700 AphA Acid phosphatase (class B) [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.67 E-value=9.4e-08 Score=67.00 Aligned_cols=97 Identities=19% Similarity=0.175 Sum_probs=67.7
Q ss_pred CCCccHHHHHHHHHhCCCCEEEEeCChhhHH---HHHHhhhhhhhhhcceeeeCCCCCccCCCCCHHHHHHHHHHcCCCC
Q 026543 94 ELMPGASHLIRHLHAKGIPMCVATGSLARHF---ELKTQKHRELFSLMHHVVRGDDPEVKQGKPSPDIFLAAAKRFEGGP 170 (237)
Q Consensus 94 ~~~~~~~~~l~~l~~~g~~v~i~s~~~~~~~---~~~~~~~~gl~~~f~~~~~~~~~~~~~~kp~~~~~~~~l~~~~~~~ 170 (237)
.+-+-+++++....++|-.++.+|+++...+ ...+.+.+.+....-.++.++ .+||.....-.+++..+
T Consensus 114 IPKevA~qLI~MHq~RGD~i~FvTGRt~gk~d~vsk~Lak~F~i~~m~pv~f~Gd-----k~k~~qy~Kt~~i~~~~--- 185 (237)
T COG3700 114 IPKEVARQLIDMHQRRGDAIYFVTGRTPGKTDTVSKTLAKNFHITNMNPVIFAGD-----KPKPGQYTKTQWIQDKN--- 185 (237)
T ss_pred chHHHHHHHHHHHHhcCCeEEEEecCCCCcccccchhHHhhcccCCCcceeeccC-----CCCcccccccHHHHhcC---
Confidence 3555678899999999999999999776543 334445555544444556665 22433334445666666
Q ss_pred CCCCcEEEEecCHHHHHHHHHcCCeEEEEcCC
Q 026543 171 IDSQEILVFEDAPSGVLAAKNAGMSVVMVPDP 202 (237)
Q Consensus 171 ~~~~~~~~igD~~~Di~~a~~~G~~~i~v~~~ 202 (237)
+ -++.|||.+||-+|+.+|++.|-+-+.
T Consensus 186 ~----~IhYGDSD~Di~AAkeaG~RgIRilRA 213 (237)
T COG3700 186 I----RIHYGDSDNDITAAKEAGARGIRILRA 213 (237)
T ss_pred c----eEEecCCchhhhHHHhcCccceeEEec
Confidence 3 489999999999999999998877553
|
|
| >TIGR01675 plant-AP plant acid phosphatase | Back alignment and domain information |
|---|
Probab=98.67 E-value=1.1e-06 Score=65.69 Aligned_cols=105 Identities=14% Similarity=0.150 Sum_probs=64.1
Q ss_pred CCCCCccHHHHHHHHHhCCCCEEEEeCChhhH--HHHHHhhhhhhhhhcceeeeCCCCCccCCCCCHHHHHHHHHHcCCC
Q 026543 92 TSELMPGASHLIRHLHAKGIPMCVATGSLARH--FELKTQKHRELFSLMHHVVRGDDPEVKQGKPSPDIFLAAAKRFEGG 169 (237)
Q Consensus 92 ~~~~~~~~~~~l~~l~~~g~~v~i~s~~~~~~--~~~~~~~~~gl~~~f~~~~~~~~~~~~~~kp~~~~~~~~l~~~~~~ 169 (237)
..++.|++.++++.++++|+.|+++|++.... .....+...|+..+ +.++-.. .....++.........+++-
T Consensus 118 ~apaip~al~l~~~l~~~G~~Vf~lTGR~e~~r~~T~~nL~~~G~~~~-~~LiLR~--~~d~~~~~~~yKs~~R~~l~-- 192 (229)
T TIGR01675 118 AAPALPEGLKLYQKIIELGIKIFLLSGRWEELRNATLDNLINAGFTGW-KHLILRG--LEDSNKTVVTYKSEVRKSLM-- 192 (229)
T ss_pred CCCCCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHHcCCCCc-CeeeecC--CCCCCchHhHHHHHHHHHHH--
Confidence 46899999999999999999999999987544 23344555676654 4443322 11122322222233333332
Q ss_pred CCCCC-cEEEEecCHHHHHHHHHcCCeEEEEcCCC
Q 026543 170 PIDSQ-EILVFEDAPSGVLAAKNAGMSVVMVPDPR 203 (237)
Q Consensus 170 ~~~~~-~~~~igD~~~Di~~a~~~G~~~i~v~~~~ 203 (237)
-..- =+..|||..+|+.+ ..+|.++..++.+.
T Consensus 193 -~~GYrIv~~iGDq~sDl~G-~~~~~RtFKLPNPm 225 (229)
T TIGR01675 193 -EEGYRIWGNIGDQWSDLLG-SPPGRRTFKLPNPM 225 (229)
T ss_pred -hCCceEEEEECCChHHhcC-CCccCceeeCCCCc
Confidence 2223 35668999999955 45666666665543
|
This model explicitly excludes the VSPs which lack the nucleophilc aspartate. The possibility exists, however, that some members of this family may, while containing all of the conserved HAD-superfamily catalytic residues, lack activity and have a function related to the function of the VSPs rather than the acid phosphatases. |
| >PF03767 Acid_phosphat_B: HAD superfamily, subfamily IIIB (Acid phosphatase); InterPro: IPR005519 This family of class B acid phosphatases also contains a number of vegetative storage proteins (VPS25) | Back alignment and domain information |
|---|
Probab=98.60 E-value=5.2e-08 Score=73.59 Aligned_cols=101 Identities=21% Similarity=0.244 Sum_probs=61.6
Q ss_pred CCCCccHHHHHHHHHhCCCCEEEEeCChhhH--HHHHHhhhhhhhhhcceeeeCCCCCccCC----CCCHHHHHHHHHH-
Q 026543 93 SELMPGASHLIRHLHAKGIPMCVATGSLARH--FELKTQKHRELFSLMHHVVRGDDPEVKQG----KPSPDIFLAAAKR- 165 (237)
Q Consensus 93 ~~~~~~~~~~l~~l~~~g~~v~i~s~~~~~~--~~~~~~~~~gl~~~f~~~~~~~~~~~~~~----kp~~~~~~~~l~~- 165 (237)
.++.|++.++++.++++|+.|+++||+.... ....-++..|...+-..++.+. ..... .-+..-...+.++
T Consensus 114 ~~aip~a~~l~~~~~~~G~~V~~iT~R~~~~r~~T~~nL~~~G~~~~~~l~lr~~--~~~~~~~~~~yK~~~r~~i~~~G 191 (229)
T PF03767_consen 114 APAIPGALELYNYARSRGVKVFFITGRPESQREATEKNLKKAGFPGWDHLILRPD--KDPSKKSAVEYKSERRKEIEKKG 191 (229)
T ss_dssp GEEETTHHHHHHHHHHTTEEEEEEEEEETTCHHHHHHHHHHHTTSTBSCGEEEEE--SSTSS------SHHHHHHHHHTT
T ss_pred CcccHHHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHHcCCCccchhccccc--cccccccccccchHHHHHHHHcC
Confidence 4789999999999999999999999976553 2333455566554433333333 11111 1133334444444
Q ss_pred cCCCCCCCCcEEEEecCHHHHHHHHHc---CCeEEEEcCC
Q 026543 166 FEGGPIDSQEILVFEDAPSGVLAAKNA---GMSVVMVPDP 202 (237)
Q Consensus 166 ~~~~~~~~~~~~~igD~~~Di~~a~~~---G~~~i~v~~~ 202 (237)
+. =+++|||..+|+..++.. |-+.+.++.+
T Consensus 192 y~-------Ii~~iGD~~~D~~~~~~~~~~~~r~f~lPNp 224 (229)
T PF03767_consen 192 YR-------IIANIGDQLSDFSGAKTAGARAERWFKLPNP 224 (229)
T ss_dssp EE-------EEEEEESSGGGCHCTHHHHHHHTTEEE-TTS
T ss_pred Cc-------EEEEeCCCHHHhhcccccccccceEEEcCCC
Confidence 33 378899999999985443 3445555443
|
The acid phosphatase activity of VPS has been experimentally demonstrated [].; GO: 0003993 acid phosphatase activity; PDB: 3PCT_C 2I34_A 2I33_A 1Z5U_D 1Z5G_A 2AUT_C 1Z88_B 3OCV_A 3OCZ_A 3OCX_A .... |
| >PLN02177 glycerol-3-phosphate acyltransferase | Back alignment and domain information |
|---|
Probab=98.60 E-value=3.7e-06 Score=70.40 Aligned_cols=173 Identities=15% Similarity=0.038 Sum_probs=85.0
Q ss_pred ccEEEEecCcccccchhhHHHHHHHHHHHcCC-------C-CCHHHHHHhcCCChHHHHHHHHHHhCCCCCCCHHHHHHH
Q 026543 10 ITHVIFDMDGLLLDTEKFYTEVQELILARYNK-------T-FDWSLKAKMMGKKAIEAAQVFVEETGISDKLSAEDFLVQ 81 (237)
Q Consensus 10 ~~~vifD~DGTL~~~~~~~~~~~~~~~~~~g~-------~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (237)
-+.++||+||||+.++..+...+.-+++.-+. . ...-..... +.+.....+.+....=.. ...+++...
T Consensus 22 ~~~~~FDfDGTLt~~~s~f~~Fll~A~~~~~~~r~lllll~~P~~~l~~~-~~~~~~~~~~l~~~~f~G--~~~~el~~~ 98 (497)
T PLN02177 22 NQTVAADLDGTLLISRSAFPYYLLVALEAGSLLRALILLLSVPFVYFTYL-FISESLAIKTFVFIAFAG--LKIRDIELV 98 (497)
T ss_pred ccEEEEecCCcccCCCCccHHHHHHHcccchHHHHHHHHHHhHHHHHHHh-cCCchhHHHHHHHHHHcC--CCHHHHHHH
Confidence 46799999999998664433222211111110 0 011111111 223333333333332111 456666555
Q ss_pred HHHHHHhhcCCCCCCccHHHHHHHHHhCCCCEEEEeCChhhHHHHHHhhh-hhhhhhc--------ceeeeCCCCCccCC
Q 026543 82 REETLQTLFPTSELMPGASHLIRHLHAKGIPMCVATGSLARHFELKTQKH-RELFSLM--------HHVVRGDDPEVKQG 152 (237)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~v~i~s~~~~~~~~~~~~~~-~gl~~~f--------~~~~~~~~~~~~~~ 152 (237)
.+....+.... .+.+.+.+. ++++|. .+|+|.+... +...+++. +|++... ++.++|. -.+..
T Consensus 99 ~r~~l~~f~~~-~l~~~a~~~---~~~~g~-~vvVSASp~~-~Vepfa~~~LGid~VIgTeLev~~~G~~TG~--i~g~~ 170 (497)
T PLN02177 99 SRSVLPKFYAE-DVHPETWRV---FNSFGK-RYIITASPRI-MVEPFVKTFLGADKVLGTELEVSKSGRATGF--MKKPG 170 (497)
T ss_pred HHHHHHHHHHH-hcCHHHHHH---HHhCCC-EEEEECCcHH-HHHHHHHHcCCCCEEEecccEECcCCEEeee--ecCCC
Confidence 54444443322 255555554 455664 5899985544 44467754 6654321 2333332 11110
Q ss_pred CCCH-HHHHHHHHHcCCCCCCCCcEEEEecCHHHHHHHHHcCCeEE
Q 026543 153 KPSP-DIFLAAAKRFEGGPIDSQEILVFEDAPSGVLAAKNAGMSVV 197 (237)
Q Consensus 153 kp~~-~~~~~~l~~~~~~~~~~~~~~~igD~~~Di~~a~~~G~~~i 197 (237)
--.. +-...+.+.++ .+... +++|||.+|.++...|+-..+
T Consensus 171 ~c~Ge~Kv~rl~~~~g---~~~~~-~aYgDS~sD~plL~~a~e~y~ 212 (497)
T PLN02177 171 VLVGDHKRDAVLKEFG---DALPD-LGLGDRETDHDFMSICKEGYM 212 (497)
T ss_pred CCccHHHHHHHHHHhC---CCCce-EEEECCccHHHHHHhCCccEE
Confidence 0011 12333335566 44444 899999999999999996533
|
|
| >TIGR01116 ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=98.57 E-value=1.8e-07 Score=84.36 Aligned_cols=124 Identities=14% Similarity=0.111 Sum_probs=86.5
Q ss_pred CCCCccHHHHHHHHHhCCCCEEEEeCChhhHHHHHHhhhhhhhhhc----ceeeeCCCC--------------CccCCCC
Q 026543 93 SELMPGASHLIRHLHAKGIPMCVATGSLARHFELKTQKHRELFSLM----HHVVRGDDP--------------EVKQGKP 154 (237)
Q Consensus 93 ~~~~~~~~~~l~~l~~~g~~v~i~s~~~~~~~~~~~~~~~gl~~~f----~~~~~~~~~--------------~~~~~kp 154 (237)
.++.+++.+.++.|++.|++++++|+... .....+.+..|+...- ...+.+..- ..-..+.
T Consensus 536 Dplr~~v~e~I~~l~~aGI~v~miTGD~~-~tA~~ia~~~gi~~~~~~v~~~~~~g~~l~~~~~~~~~~~~~~~~v~ar~ 614 (917)
T TIGR01116 536 DPPRPEVADAIEKCRTAGIRVIMITGDNK-ETAEAICRRIGIFSPDEDVTFKSFTGREFDEMGPAKQRAACRSAVLFSRV 614 (917)
T ss_pred CCCchhHHHHHHHHHHCCCEEEEecCCCH-HHHHHHHHHcCCCCCCccccceeeeHHHHhhCCHHHHHHhhhcCeEEEec
Confidence 46899999999999999999999998443 4444677777774311 112222100 0112334
Q ss_pred CHHHHHHHHHHcCCCCCCCCcEEEEecCHHHHHHHHHcCCeEEEEcCCCCCcccccchhhhhhh--hcccC
Q 026543 155 SPDIFLAAAKRFEGGPIDSQEILVFEDAPSGVLAAKNAGMSVVMVPDPRLDSSYHSNADQLLSS--LLGFN 223 (237)
Q Consensus 155 ~~~~~~~~l~~~~~~~~~~~~~~~igD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~~--~~el~ 223 (237)
.|+-...+++.++ -..+.+.|+||+.||+.|.+.|+ ++|+.+...+..+..+|+++.+ |..+.
T Consensus 615 ~P~~K~~iV~~lq---~~g~~va~iGDG~ND~~alk~Ad---VGia~g~g~~~ak~aAD~vl~dd~f~~i~ 679 (917)
T TIGR01116 615 EPSHKSELVELLQ---EQGEIVAMTGDGVNDAPALKKAD---IGIAMGSGTEVAKEASDMVLADDNFATIV 679 (917)
T ss_pred CHHHHHHHHHHHH---hcCCeEEEecCCcchHHHHHhCC---eeEECCCCcHHHHHhcCeEEccCCHHHHH
Confidence 5666677888887 66778999999999999999999 5666665555556678888766 66554
|
The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1, the latter of which is modelled by TIGR01522. |
| >PF11019 DUF2608: Protein of unknown function (DUF2608); InterPro: IPR022565 This family is conserved in Bacteria | Back alignment and domain information |
|---|
Probab=98.56 E-value=1.2e-05 Score=61.74 Aligned_cols=110 Identities=13% Similarity=0.208 Sum_probs=75.2
Q ss_pred CCCCCccHHHHHHHHHhCCCCEEEEeCChhhHHH--HHHhhhhhhhh--h-c--ceee-----eC---------CCCCcc
Q 026543 92 TSELMPGASHLIRHLHAKGIPMCVATGSLARHFE--LKTQKHRELFS--L-M--HHVV-----RG---------DDPEVK 150 (237)
Q Consensus 92 ~~~~~~~~~~~l~~l~~~g~~v~i~s~~~~~~~~--~~~~~~~gl~~--~-f--~~~~-----~~---------~~~~~~ 150 (237)
....-+++.++++.|+.+|+++..+|........ .+.++.+|+.- . | +..+ .. +..-..
T Consensus 79 ~~lie~~~~~~i~~lq~~~~~v~alT~~~~~~~~~t~~~Lk~~gi~fs~~~~~~~~~~~~~~~~~~~~~~~~~~~GIlft 158 (252)
T PF11019_consen 79 MELIESDVPNIINSLQNKGIPVIALTARGPNMEDWTLRELKSLGIDFSSSSFPEDGIISFPVFDSALSRAPSFYDGILFT 158 (252)
T ss_pred eEEcchhHHHHHHHHHHCCCcEEEEcCCChhhHHHHHHHHHHCCCCccccccccCcceecccccCCCCCCceeecCeEEe
Confidence 3456778999999999999999999987755433 33344455421 0 0 0000 00 000112
Q ss_pred CCCCCHHHHHHHHHHcCCCCCCCCcEEEEecCHHHHHHHHH----cCCeEEEEcCCCC
Q 026543 151 QGKPSPDIFLAAAKRFEGGPIDSQEILVFEDAPSGVLAAKN----AGMSVVMVPDPRL 204 (237)
Q Consensus 151 ~~kp~~~~~~~~l~~~~~~~~~~~~~~~igD~~~Di~~a~~----~G~~~i~v~~~~~ 204 (237)
.+-++..++..++.+.| ..|+.+|||+|+..++..... .|+..+++.....
T Consensus 159 ~~~~KG~~L~~fL~~~~---~~pk~IIfIDD~~~nl~sv~~a~k~~~I~f~G~~Yt~~ 213 (252)
T PF11019_consen 159 GGQDKGEVLKYFLDKIN---QSPKKIIFIDDNKENLKSVEKACKKSGIDFIGFHYTGA 213 (252)
T ss_pred CCCccHHHHHHHHHHcC---CCCCeEEEEeCCHHHHHHHHHHHhhCCCcEEEEEEcch
Confidence 34567899999999999 999999999999988876554 5888888876544
|
The function is not known. |
| >PRK14010 potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Probab=98.52 E-value=2.8e-07 Score=79.52 Aligned_cols=104 Identities=15% Similarity=0.099 Sum_probs=79.3
Q ss_pred CCCCccHHHHHHHHHhCCCCEEEEeCChhhHHHHHHhhhhhhhhhcceeeeCCCCCccCCCCCHHHHHHHHHHcCCCCCC
Q 026543 93 SELMPGASHLIRHLHAKGIPMCVATGSLARHFELKTQKHRELFSLMHHVVRGDDPEVKQGKPSPDIFLAAAKRFEGGPID 172 (237)
Q Consensus 93 ~~~~~~~~~~l~~l~~~g~~v~i~s~~~~~~~~~~~~~~~gl~~~f~~~~~~~~~~~~~~kp~~~~~~~~l~~~~~~~~~ 172 (237)
.++.|++++.++.|++.|+++.++|+ +.......+.+.+|+.++ ++. -.|+-...+.+.++ -.
T Consensus 440 Dp~R~~a~e~I~~Lr~~GI~vvMiTG-Dn~~TA~aIA~elGI~~v----~A~---------~~PedK~~iV~~lQ---~~ 502 (673)
T PRK14010 440 DVIKDGLVERFRELREMGIETVMCTG-DNELTAATIAKEAGVDRF----VAE---------CKPEDKINVIREEQ---AK 502 (673)
T ss_pred cCCcHHHHHHHHHHHHCCCeEEEECC-CCHHHHHHHHHHcCCceE----EcC---------CCHHHHHHHHHHHH---hC
Confidence 47899999999999999999999998 555566678888888542 221 14666677777776 55
Q ss_pred CCcEEEEecCHHHHHHHHHcCCeEEEEcCCCCCcccccchhhhh
Q 026543 173 SQEILVFEDAPSGVLAAKNAGMSVVMVPDPRLDSSYHSNADQLL 216 (237)
Q Consensus 173 ~~~~~~igD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~ 216 (237)
.+-+.|+||+.||..+.++|. ++++++...+..+..+|.+.
T Consensus 503 G~~VaMtGDGvNDAPALa~AD---VGIAMgsGTdvAkeAADiVL 543 (673)
T PRK14010 503 GHIVAMTGDGTNDAPALAEAN---VGLAMNSGTMSAKEAANLID 543 (673)
T ss_pred CCEEEEECCChhhHHHHHhCC---EEEEeCCCCHHHHHhCCEEE
Confidence 567999999999999999999 77777755544455555543
|
|
| >COG2217 ZntA Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.49 E-value=3e-07 Score=79.58 Aligned_cols=102 Identities=20% Similarity=0.187 Sum_probs=77.0
Q ss_pred CCCCccHHHHHHHHHhCCCCEEEEeCChhhHHHHHHhhhhhhhhhcceeeeCCCCCccCCCCCHHHHHHHHHHcCCCCCC
Q 026543 93 SELMPGASHLIRHLHAKGIPMCVATGSLARHFELKTQKHRELFSLMHHVVRGDDPEVKQGKPSPDIFLAAAKRFEGGPID 172 (237)
Q Consensus 93 ~~~~~~~~~~l~~l~~~g~~v~i~s~~~~~~~~~~~~~~~gl~~~f~~~~~~~~~~~~~~kp~~~~~~~~l~~~~~~~~~ 172 (237)
.++.|++++.++.|++.|+++.++|+ +.......+.+.+|+++++..+. |+-.....+++. -.
T Consensus 536 D~~R~~a~~aI~~L~~~Gi~~~mLTG-Dn~~~A~~iA~~lGId~v~Aell-------------PedK~~~V~~l~---~~ 598 (713)
T COG2217 536 DELRPDAKEAIAALKALGIKVVMLTG-DNRRTAEAIAKELGIDEVRAELL-------------PEDKAEIVRELQ---AE 598 (713)
T ss_pred CCCChhHHHHHHHHHHCCCeEEEEcC-CCHHHHHHHHHHcChHhheccCC-------------cHHHHHHHHHHH---hc
Confidence 67899999999999999999999998 55566667888899866544443 333455666666 45
Q ss_pred CCcEEEEecCHHHHHHHHHcCCeEEEEcCCCCCcccccchhh
Q 026543 173 SQEILVFEDAPSGVLAAKNAGMSVVMVPDPRLDSSYHSNADQ 214 (237)
Q Consensus 173 ~~~~~~igD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~ 214 (237)
...+.||||+.||..+...+. +++..|.........+|.
T Consensus 599 g~~VamVGDGINDAPALA~Ad---VGiAmG~GtDvA~eaADv 637 (713)
T COG2217 599 GRKVAMVGDGINDAPALAAAD---VGIAMGSGTDVAIEAADV 637 (713)
T ss_pred CCEEEEEeCCchhHHHHhhcC---eeEeecCCcHHHHHhCCE
Confidence 579999999999999999998 667776654333444444
|
|
| >PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=98.48 E-value=1.2e-05 Score=62.04 Aligned_cols=51 Identities=14% Similarity=0.155 Sum_probs=38.2
Q ss_pred CCCCHHHHHHHHHHcCCCCCCCCcEEEEecCHHHHHHHHHcCCeEEEEcCCCC
Q 026543 152 GKPSPDIFLAAAKRFEGGPIDSQEILVFEDAPSGVLAAKNAGMSVVMVPDPRL 204 (237)
Q Consensus 152 ~kp~~~~~~~~l~~~~~~~~~~~~~~~igD~~~Di~~a~~~G~~~i~v~~~~~ 204 (237)
..+|..+.+.+.+.+.... .+-.++.+|||+||+.|.+.+.++++ |..+..
T Consensus 206 ~~dKg~A~~~L~~~y~~~~-~~~~tiaLGDspND~~mLe~~D~~vv-i~~~~~ 256 (302)
T PRK12702 206 SLPGEQAVQLLLDCYQRHL-GPIKALGIGCSPPDLAFLRWSEQKVV-LPSPIA 256 (302)
T ss_pred CCCHHHHHHHHHHHHHhcc-CCceEEEecCChhhHHHHHhCCeeEE-ecCCCC
Confidence 4467889999999887211 24489999999999999999998755 444433
|
|
| >PRK11033 zntA zinc/cadmium/mercury/lead-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=98.48 E-value=6.1e-07 Score=79.11 Aligned_cols=101 Identities=17% Similarity=0.072 Sum_probs=71.9
Q ss_pred CCCCccHHHHHHHHHhCCCCEEEEeCChhhHHHHHHhhhhhhhhhcceeeeCCCCCccCCCCCHHHHHHHHHHcCCCCCC
Q 026543 93 SELMPGASHLIRHLHAKGIPMCVATGSLARHFELKTQKHRELFSLMHHVVRGDDPEVKQGKPSPDIFLAAAKRFEGGPID 172 (237)
Q Consensus 93 ~~~~~~~~~~l~~l~~~g~~v~i~s~~~~~~~~~~~~~~~gl~~~f~~~~~~~~~~~~~~kp~~~~~~~~l~~~~~~~~~ 172 (237)
.+++|++.+.++.|++.|++++++|+ +.......+.+.+|+..+ .+ . .|+-...++++++ -
T Consensus 567 d~~r~~a~~~i~~L~~~gi~~~llTG-d~~~~a~~ia~~lgi~~~------~~--~------~p~~K~~~v~~l~---~- 627 (741)
T PRK11033 567 DTLRADARQAISELKALGIKGVMLTG-DNPRAAAAIAGELGIDFR------AG--L------LPEDKVKAVTELN---Q- 627 (741)
T ss_pred cCCchhHHHHHHHHHHCCCEEEEEcC-CCHHHHHHHHHHcCCCee------cC--C------CHHHHHHHHHHHh---c-
Confidence 57899999999999999999999999 444555577888887421 11 1 1233444666666 3
Q ss_pred CCcEEEEecCHHHHHHHHHcCCeEEEEcCCCCCcccccchhhh
Q 026543 173 SQEILVFEDAPSGVLAAKNAGMSVVMVPDPRLDSSYHSNADQL 215 (237)
Q Consensus 173 ~~~~~~igD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~ 215 (237)
+.+++||||+.||..+++.++ ++|+.+.........+|.+
T Consensus 628 ~~~v~mvGDgiNDapAl~~A~---vgia~g~~~~~a~~~adiv 667 (741)
T PRK11033 628 HAPLAMVGDGINDAPAMKAAS---IGIAMGSGTDVALETADAA 667 (741)
T ss_pred CCCEEEEECCHHhHHHHHhCC---eeEEecCCCHHHHHhCCEE
Confidence 368999999999999999999 6666665533333334443
|
|
| >TIGR01680 Veg_Stor_Prot vegetative storage protein | Back alignment and domain information |
|---|
Probab=98.48 E-value=3.5e-06 Score=64.17 Aligned_cols=107 Identities=11% Similarity=0.165 Sum_probs=61.7
Q ss_pred CCCCCccHHHHHHHHHhCCCCEEEEeCChhhH--HHHHHhhhhhhhhhcceeeeCCCCCccCCCCCHHHHHHHHHHcCCC
Q 026543 92 TSELMPGASHLIRHLHAKGIPMCVATGSLARH--FELKTQKHRELFSLMHHVVRGDDPEVKQGKPSPDIFLAAAKRFEGG 169 (237)
Q Consensus 92 ~~~~~~~~~~~l~~l~~~g~~v~i~s~~~~~~--~~~~~~~~~gl~~~f~~~~~~~~~~~~~~kp~~~~~~~~l~~~~~~ 169 (237)
..++.|++.++.+.++++|++|+++||+.... .....++..|+..+ +..+-... .....+..........+++-
T Consensus 143 ~ApAlp~al~ly~~l~~~G~kIf~VSgR~e~~r~aT~~NL~kaGy~~~-~~LiLR~~-~D~~~~~av~yKs~~R~~li-- 218 (275)
T TIGR01680 143 EAPALPETLKNYNKLVSLGFKIIFLSGRLKDKQAVTEANLKKAGYHTW-EKLILKDP-QDNSAENAVEYKTAARAKLI-- 218 (275)
T ss_pred cCCCChHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHHcCCCCc-ceeeecCC-CCCccchhHHHHHHHHHHHH--
Confidence 47799999999999999999999999987543 23344555566544 33333220 11112222222222222222
Q ss_pred CCC-CCcEEEEecCHHHHHHHHHcCCeEEEEcCCC
Q 026543 170 PID-SQEILVFEDAPSGVLAAKNAGMSVVMVPDPR 203 (237)
Q Consensus 170 ~~~-~~~~~~igD~~~Di~~a~~~G~~~i~v~~~~ 203 (237)
-+ ..=+..|||..+|+.+....+-++..++.+.
T Consensus 219 -~eGYrIv~~iGDq~sDl~G~~~g~~RtFKLPNP~ 252 (275)
T TIGR01680 219 -QEGYNIVGIIGDQWNDLKGEHRGAIRSFKLPNPC 252 (275)
T ss_pred -HcCceEEEEECCCHHhccCCCccCcceecCCCcc
Confidence 11 2345778999999955442234566665543
|
The proteins represented by this model are close relatives of the plant acid phosphatases (TIGR01675), are limited to members of the Phaseoleae including Glycine max (soybean) and Phaseolus vulgaris (kidney bean). These proteins are highly expressed in the leaves of repeatedly depodded plants. VSP differs most strinkingly from the acid phosphatases in the lack of the conserved nucleophilic aspartate residue in the N-terminus, thus, they should be inactive as phosphatases. This issue was confused by the publication in 1992 of an article claiming activity for the Glycine max VSP. In 1994 this assertion was refuted by the separation of the activity from the VSP. |
| >PRK01122 potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Probab=98.47 E-value=3.7e-07 Score=78.91 Aligned_cols=104 Identities=14% Similarity=0.107 Sum_probs=77.9
Q ss_pred CCCCccHHHHHHHHHhCCCCEEEEeCChhhHHHHHHhhhhhhhhhcceeeeCCCCCccCCCCCHHHHHHHHHHcCCCCCC
Q 026543 93 SELMPGASHLIRHLHAKGIPMCVATGSLARHFELKTQKHRELFSLMHHVVRGDDPEVKQGKPSPDIFLAAAKRFEGGPID 172 (237)
Q Consensus 93 ~~~~~~~~~~l~~l~~~g~~v~i~s~~~~~~~~~~~~~~~gl~~~f~~~~~~~~~~~~~~kp~~~~~~~~l~~~~~~~~~ 172 (237)
.++.|++++.++.|++.|+++.++|+ +.......+.+.+|+++ +++.- .|+-...+.++++ -.
T Consensus 444 D~~R~~~~eai~~Lr~~GI~vvMiTG-Dn~~TA~aIA~elGId~----v~A~~---------~PedK~~iV~~lQ---~~ 506 (679)
T PRK01122 444 DIVKPGIKERFAELRKMGIKTVMITG-DNPLTAAAIAAEAGVDD----FLAEA---------TPEDKLALIRQEQ---AE 506 (679)
T ss_pred ccCchhHHHHHHHHHHCCCeEEEECC-CCHHHHHHHHHHcCCcE----EEccC---------CHHHHHHHHHHHH---Hc
Confidence 46799999999999999999999998 55556667888888854 22221 3566677777776 55
Q ss_pred CCcEEEEecCHHHHHHHHHcCCeEEEEcCCCCCcccccchhhhh
Q 026543 173 SQEILVFEDAPSGVLAAKNAGMSVVMVPDPRLDSSYHSNADQLL 216 (237)
Q Consensus 173 ~~~~~~igD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~ 216 (237)
.+-+.|+||+.||..+.+.|. ++++++...+..+..+|.++
T Consensus 507 G~~VaMtGDGvNDAPALa~AD---VGIAMgsGTdvAkeAADiVL 547 (679)
T PRK01122 507 GRLVAMTGDGTNDAPALAQAD---VGVAMNSGTQAAKEAGNMVD 547 (679)
T ss_pred CCeEEEECCCcchHHHHHhCC---EeEEeCCCCHHHHHhCCEEE
Confidence 567999999999999999999 66777655444445555443
|
|
| >TIGR01497 kdpB K+-transporting ATPase, B subunit | Back alignment and domain information |
|---|
Probab=98.43 E-value=4.7e-07 Score=78.16 Aligned_cols=103 Identities=15% Similarity=0.121 Sum_probs=73.5
Q ss_pred CCCCccHHHHHHHHHhCCCCEEEEeCChhhHHHHHHhhhhhhhhhcceeeeCCCCCccCCCCCHHHHHHHHHHcCCCCCC
Q 026543 93 SELMPGASHLIRHLHAKGIPMCVATGSLARHFELKTQKHRELFSLMHHVVRGDDPEVKQGKPSPDIFLAAAKRFEGGPID 172 (237)
Q Consensus 93 ~~~~~~~~~~l~~l~~~g~~v~i~s~~~~~~~~~~~~~~~gl~~~f~~~~~~~~~~~~~~kp~~~~~~~~l~~~~~~~~~ 172 (237)
.++.|++++.++.|++.|++++++|+ +.......+.+.+|+.++ ++.- .|+-...+++++. -.
T Consensus 445 D~~Rp~a~eaI~~l~~~Gi~v~miTG-D~~~ta~~iA~~lGI~~v----~a~~---------~PedK~~~v~~lq---~~ 507 (675)
T TIGR01497 445 DIVKGGIKERFAQLRKMGIKTIMITG-DNRLTAAAIAAEAGVDDF----IAEA---------TPEDKIALIRQEQ---AE 507 (675)
T ss_pred ccchhHHHHHHHHHHHCCCEEEEEcC-CCHHHHHHHHHHcCCCEE----EcCC---------CHHHHHHHHHHHH---Hc
Confidence 47899999999999999999999998 444555577888887543 3221 2444555555555 44
Q ss_pred CCcEEEEecCHHHHHHHHHcCCeEEEEcCCCCCcccccchhhh
Q 026543 173 SQEILVFEDAPSGVLAAKNAGMSVVMVPDPRLDSSYHSNADQL 215 (237)
Q Consensus 173 ~~~~~~igD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~ 215 (237)
...+.|+||+.||..+.+.++ ++++.+...+..+..+|.+
T Consensus 508 g~~VamvGDG~NDapAL~~Ad---vGiAm~~gt~~akeaadiv 547 (675)
T TIGR01497 508 GKLVAMTGDGTNDAPALAQAD---VGVAMNSGTQAAKEAANMV 547 (675)
T ss_pred CCeEEEECCCcchHHHHHhCC---EeEEeCCCCHHHHHhCCEE
Confidence 557999999999999999999 5565554443334444443
|
One sequence is apparently mis-annotated in the primary literature, but properly annotated by TIGR. |
| >PF05116 S6PP: Sucrose-6F-phosphate phosphohydrolase; InterPro: IPR006380 This family of sequences represent sucrose phosphate phosphohydrolase (SPP) from plants and cyanobacteria [] | Back alignment and domain information |
|---|
Probab=98.40 E-value=6.7e-07 Score=68.57 Aligned_cols=47 Identities=19% Similarity=0.266 Sum_probs=36.9
Q ss_pred CCCCCHHHHHHHHHHcCCCCCCCCcEEEEecCHHHHHHHHHcCCeEEEEcC
Q 026543 151 QGKPSPDIFLAAAKRFEGGPIDSQEILVFEDAPSGVLAAKNAGMSVVMVPD 201 (237)
Q Consensus 151 ~~kp~~~~~~~~l~~~~~~~~~~~~~~~igD~~~Di~~a~~~G~~~i~v~~ 201 (237)
..--|..+++.++++++ +++++++++|||.||+.|. ..+...|.|..
T Consensus 162 ~~a~K~~Al~~L~~~~~---~~~~~vl~aGDSgND~~mL-~~~~~~vvV~N 208 (247)
T PF05116_consen 162 KGASKGAALRYLMERWG---IPPEQVLVAGDSGNDLEML-EGGDHGVVVGN 208 (247)
T ss_dssp TT-SHHHHHHHHHHHHT-----GGGEEEEESSGGGHHHH-CCSSEEEE-TT
T ss_pred CCCCHHHHHHHHHHHhC---CCHHHEEEEeCCCCcHHHH-cCcCCEEEEcC
Confidence 34446899999999999 9999999999999999999 66667777754
|
SPP is a member of the Class IIB subfamily of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. SPP catalyzes the final step in the biosynthesis of sucrose, a critically important molecule for plants. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.; PDB: 1TJ5_A 2B1Q_A 1TJ4_A 1S2O_A 1U2T_A 2D2V_A 1TJ3_A 1U2S_A 2B1R_A 3GYG_B .... |
| >PTZ00174 phosphomannomutase; Provisional | Back alignment and domain information |
|---|
Probab=98.39 E-value=5.2e-08 Score=74.81 Aligned_cols=44 Identities=16% Similarity=0.094 Sum_probs=35.6
Q ss_pred cCCCCCHHHHHHHHHHcCCCCCCCCcEEEEec----CHHHHHHHHHcCCeEEEEc
Q 026543 150 KQGKPSPDIFLAAAKRFEGGPIDSQEILVFED----APSGVLAAKNAGMSVVMVP 200 (237)
Q Consensus 150 ~~~kp~~~~~~~~l~~~~~~~~~~~~~~~igD----~~~Di~~a~~~G~~~i~v~ 200 (237)
..+..|..++++++++. +++++||| +.||++|.+.++...+.|.
T Consensus 184 ~~gvsKg~al~~L~~~~-------~eviafGD~~~~~~NDieMl~~~~~~g~~v~ 231 (247)
T PTZ00174 184 PKGWDKTYCLRHLENDF-------KEIHFFGDKTFEGGNDYEIYNDPRTIGHSVK 231 (247)
T ss_pred eCCCcHHHHHHHHHhhh-------hhEEEEcccCCCCCCcHhhhhcCCCceEEeC
Confidence 34556678888887773 59999999 8899999999888777776
|
|
| >TIGR01517 ATPase-IIB_Ca plasma-membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=98.36 E-value=7e-07 Score=80.87 Aligned_cols=118 Identities=15% Similarity=0.086 Sum_probs=81.3
Q ss_pred CCCCccHHHHHHHHHhCCCCEEEEeCChhhHHHHHHhhhhhhhhhcceeeeCCCC--------------CccCCCCCHHH
Q 026543 93 SELMPGASHLIRHLHAKGIPMCVATGSLARHFELKTQKHRELFSLMHHVVRGDDP--------------EVKQGKPSPDI 158 (237)
Q Consensus 93 ~~~~~~~~~~l~~l~~~g~~v~i~s~~~~~~~~~~~~~~~gl~~~f~~~~~~~~~--------------~~~~~kp~~~~ 158 (237)
.++.+++.+.++.|++.|++++++|+ +.......+.+.+|+...-..++.+.+- ..-...-.|+-
T Consensus 578 Dplr~~~~~aI~~l~~aGI~v~miTG-D~~~tA~~iA~~~GI~~~~~~vi~G~~~~~l~~~el~~~i~~~~Vfar~sPe~ 656 (941)
T TIGR01517 578 DPLRPGVREAVQECQRAGITVRMVTG-DNIDTAKAIARNCGILTFGGLAMEGKEFRRLVYEEMDPILPKLRVLARSSPLD 656 (941)
T ss_pred CCCchhHHHHHHHHHHCCCEEEEECC-CChHHHHHHHHHcCCCCCCceEeeHHHhhhCCHHHHHHHhccCeEEEECCHHH
Confidence 37889999999999999999999998 5555565778888875322233333200 01122345666
Q ss_pred HHHHHHHcCCCCCCCCcEEEEecCHHHHHHHHHcCCeEEEEcCC-CCCcccccchhhhhh
Q 026543 159 FLAAAKRFEGGPIDSQEILVFEDAPSGVLAAKNAGMSVVMVPDP-RLDSSYHSNADQLLS 217 (237)
Q Consensus 159 ~~~~l~~~~~~~~~~~~~~~igD~~~Di~~a~~~G~~~i~v~~~-~~~~~~~~~~~~~~~ 217 (237)
...+.+.+. -....+.|+||+.||..+.+.|. |+|+.+ ...+..+..+|.++.
T Consensus 657 K~~iV~~lq---~~g~vVam~GDGvNDapALk~Ad---VGIAmg~~gtdvAk~aADivL~ 710 (941)
T TIGR01517 657 KQLLVLMLK---DMGEVVAVTGDGTNDAPALKLAD---VGFSMGISGTEVAKEASDIILL 710 (941)
T ss_pred HHHHHHHHH---HCCCEEEEECCCCchHHHHHhCC---cceecCCCccHHHHHhCCEEEe
Confidence 677777776 45568999999999999999999 666666 344444555666654
|
The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1), which are modelled by the corresponding TIGR01116 and TIGR01522. This model is well separated from the two others. |
| >TIGR01524 ATPase-IIIB_Mg magnesium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=98.34 E-value=9.8e-07 Score=79.15 Aligned_cols=115 Identities=14% Similarity=0.074 Sum_probs=80.1
Q ss_pred CCCCccHHHHHHHHHhCCCCEEEEeCChhhHHHHHHhhhhhhhhhcceeeeCCCC--------------CccCCCCCHHH
Q 026543 93 SELMPGASHLIRHLHAKGIPMCVATGSLARHFELKTQKHRELFSLMHHVVRGDDP--------------EVKQGKPSPDI 158 (237)
Q Consensus 93 ~~~~~~~~~~l~~l~~~g~~v~i~s~~~~~~~~~~~~~~~gl~~~f~~~~~~~~~--------------~~~~~kp~~~~ 158 (237)
.++.|++++.++.|++.|+++.++|+ +.......+.+.+|+.. +.++.+.+- ..-...-.|+-
T Consensus 514 Dp~R~~~~~aI~~l~~aGI~vvmiTG-D~~~tA~aIA~~lGI~~--~~v~~g~~l~~~~~~el~~~~~~~~vfAr~~Pe~ 590 (867)
T TIGR01524 514 DPPKESTKEAIAALFKNGINVKVLTG-DNEIVTARICQEVGIDA--NDFLLGADIEELSDEELARELRKYHIFARLTPMQ 590 (867)
T ss_pred CCCchhHHHHHHHHHHCCCEEEEEcC-CCHHHHHHHHHHcCCCC--CCeeecHhhhhCCHHHHHHHhhhCeEEEECCHHH
Confidence 46789999999999999999999998 55556667888888852 123332200 01112235666
Q ss_pred HHHHHHHcCCCCCCCCcEEEEecCHHHHHHHHHcCCeEEEEcCCCCCcccccchhhhh
Q 026543 159 FLAAAKRFEGGPIDSQEILVFEDAPSGVLAAKNAGMSVVMVPDPRLDSSYHSNADQLL 216 (237)
Q Consensus 159 ~~~~l~~~~~~~~~~~~~~~igD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~ 216 (237)
...+.+.+. -....+.|+||+.||..+.+.|. ++++.+.+.+..+..+|.++
T Consensus 591 K~~iV~~lq---~~G~vVam~GDGvNDapALk~Ad---VGIAmg~gtdvAk~aADiVL 642 (867)
T TIGR01524 591 KSRIIGLLK---KAGHTVGFLGDGINDAPALRKAD---VGISVDTAADIAKEASDIIL 642 (867)
T ss_pred HHHHHHHHH---hCCCEEEEECCCcccHHHHHhCC---EEEEeCCccHHHHHhCCEEE
Confidence 666667666 45567999999999999999999 66666655444455566554
|
The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis. |
| >PRK15122 magnesium-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=98.34 E-value=9.5e-07 Score=79.44 Aligned_cols=115 Identities=17% Similarity=0.116 Sum_probs=82.4
Q ss_pred CCCCccHHHHHHHHHhCCCCEEEEeCChhhHHHHHHhhhhhhhhhcceeeeCCCC--------------CccCCCCCHHH
Q 026543 93 SELMPGASHLIRHLHAKGIPMCVATGSLARHFELKTQKHRELFSLMHHVVRGDDP--------------EVKQGKPSPDI 158 (237)
Q Consensus 93 ~~~~~~~~~~l~~l~~~g~~v~i~s~~~~~~~~~~~~~~~gl~~~f~~~~~~~~~--------------~~~~~kp~~~~ 158 (237)
.++.|++++.++.|++.|+++.++|+ +.......+.+.+|+.. +.++.+.+- ..-...-.|+-
T Consensus 549 Dp~R~~a~~aI~~l~~aGI~v~miTG-D~~~tA~aIA~~lGI~~--~~vi~G~el~~~~~~el~~~v~~~~VfAr~sPe~ 625 (903)
T PRK15122 549 DPPKESAAPAIAALRENGVAVKVLTG-DNPIVTAKICREVGLEP--GEPLLGTEIEAMDDAALAREVEERTVFAKLTPLQ 625 (903)
T ss_pred CccHHHHHHHHHHHHHCCCeEEEECC-CCHHHHHHHHHHcCCCC--CCccchHhhhhCCHHHHHHHhhhCCEEEEeCHHH
Confidence 47889999999999999999999998 55556667888888842 223333200 01122335677
Q ss_pred HHHHHHHcCCCCCCCCcEEEEecCHHHHHHHHHcCCeEEEEcCCCCCcccccchhhhh
Q 026543 159 FLAAAKRFEGGPIDSQEILVFEDAPSGVLAAKNAGMSVVMVPDPRLDSSYHSNADQLL 216 (237)
Q Consensus 159 ~~~~l~~~~~~~~~~~~~~~igD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~ 216 (237)
...+.+.+. -..+.+.|+||+.||..+.+.|. |+|+.+...+..+..+|.++
T Consensus 626 K~~iV~~Lq---~~G~vVamtGDGvNDaPALk~AD---VGIAmg~gtdvAkeaADiVL 677 (903)
T PRK15122 626 KSRVLKALQ---ANGHTVGFLGDGINDAPALRDAD---VGISVDSGADIAKESADIIL 677 (903)
T ss_pred HHHHHHHHH---hCCCEEEEECCCchhHHHHHhCC---EEEEeCcccHHHHHhcCEEE
Confidence 777777777 56678999999999999999999 66766655444456666655
|
|
| >PRK10517 magnesium-transporting ATPase MgtA; Provisional | Back alignment and domain information |
|---|
Probab=98.32 E-value=9.1e-07 Score=79.50 Aligned_cols=115 Identities=15% Similarity=0.103 Sum_probs=82.1
Q ss_pred CCCCccHHHHHHHHHhCCCCEEEEeCChhhHHHHHHhhhhhhhhhcceeeeCCCC--------------CccCCCCCHHH
Q 026543 93 SELMPGASHLIRHLHAKGIPMCVATGSLARHFELKTQKHRELFSLMHHVVRGDDP--------------EVKQGKPSPDI 158 (237)
Q Consensus 93 ~~~~~~~~~~l~~l~~~g~~v~i~s~~~~~~~~~~~~~~~gl~~~f~~~~~~~~~--------------~~~~~kp~~~~ 158 (237)
.++.|++.+.++.|++.|+++.++|+ +.......+.+.+|+.. +.++.+.+- ..-...-.|+-
T Consensus 549 Dp~R~~a~~aI~~l~~aGI~v~miTG-D~~~tA~~IA~~lGI~~--~~v~~G~el~~l~~~el~~~~~~~~VfAr~sPe~ 625 (902)
T PRK10517 549 DPPKETTAPALKALKASGVTVKILTG-DSELVAAKVCHEVGLDA--GEVLIGSDIETLSDDELANLAERTTLFARLTPMH 625 (902)
T ss_pred CcchhhHHHHHHHHHHCCCEEEEEcC-CCHHHHHHHHHHcCCCc--cCceeHHHHHhCCHHHHHHHHhhCcEEEEcCHHH
Confidence 46789999999999999999999998 55556667888888842 233333200 01122345667
Q ss_pred HHHHHHHcCCCCCCCCcEEEEecCHHHHHHHHHcCCeEEEEcCCCCCcccccchhhhh
Q 026543 159 FLAAAKRFEGGPIDSQEILVFEDAPSGVLAAKNAGMSVVMVPDPRLDSSYHSNADQLL 216 (237)
Q Consensus 159 ~~~~l~~~~~~~~~~~~~~~igD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~ 216 (237)
...+.+.+. -....+.|+||+.||..+.+.|. |+|+.+...+..+..+|.++
T Consensus 626 K~~IV~~Lq---~~G~vVam~GDGvNDaPALk~AD---VGIAmg~gtdvAkeaADiVL 677 (902)
T PRK10517 626 KERIVTLLK---REGHVVGFMGDGINDAPALRAAD---IGISVDGAVDIAREAADIIL 677 (902)
T ss_pred HHHHHHHHH---HCCCEEEEECCCcchHHHHHhCC---EEEEeCCcCHHHHHhCCEEE
Confidence 777777776 55667999999999999999999 66776655444455666654
|
|
| >PF05761 5_nucleotid: 5' nucleotidase family; InterPro: IPR008380 This family includes a 5'-nucleotidase, 3 | Back alignment and domain information |
|---|
Probab=98.30 E-value=4.5e-06 Score=68.83 Aligned_cols=107 Identities=16% Similarity=0.124 Sum_probs=69.8
Q ss_pred CCCCccHHHHHHHHHhCCCCEEEEeCChhhHHHHHHhhh-h--------hhhhhcceeeeCCC---------------CC
Q 026543 93 SELMPGASHLIRHLHAKGIPMCVATGSLARHFELKTQKH-R--------ELFSLMHHVVRGDD---------------PE 148 (237)
Q Consensus 93 ~~~~~~~~~~l~~l~~~g~~v~i~s~~~~~~~~~~~~~~-~--------gl~~~f~~~~~~~~---------------~~ 148 (237)
+...|.+..+|+.|+++|.++.++||+....+.. .++. + .+.++||.|++... .+
T Consensus 182 i~k~~~l~~~L~~lr~~GKklFLiTNS~~~yt~~-~M~yl~g~~~~~~~dW~dlFDvVIv~A~KP~FF~~~~pfr~vd~~ 260 (448)
T PF05761_consen 182 IHKDPKLPPWLERLRSAGKKLFLITNSPFDYTNA-VMSYLLGPFLGEDPDWRDLFDVVIVDARKPGFFTEGRPFREVDTE 260 (448)
T ss_dssp EE--CHHHHHHHHHHCCT-EEEEE-SS-HHHHHH-HHHHHCGCCSSTTT-GGGCECEEEES--CCHHHCT---EEEEETT
T ss_pred ccCCchHHHHHHHHHhcCceEEEecCCCCchhhh-hhhhccCCCCCCCCChhhheeEEEEcCCCCcccCCCCceEEEECC
Confidence 4567899999999999999999999988776653 3443 2 46789999986530 01
Q ss_pred ccC---------CCC----CHHHHHHHHHHcCCCCCCCCcEEEEecCH-HHHHHHHHc-CCeEEEEcCCC
Q 026543 149 VKQ---------GKP----SPDIFLAAAKRFEGGPIDSQEILVFEDAP-SGVLAAKNA-GMSVVMVPDPR 203 (237)
Q Consensus 149 ~~~---------~kp----~~~~~~~~l~~~~~~~~~~~~~~~igD~~-~Di~~a~~~-G~~~i~v~~~~ 203 (237)
.+. .++ .......+.+.+| ...++++||||+. .||...+.. ||.|+.|-...
T Consensus 261 ~g~l~~~~~~~~l~~g~vY~gGn~~~l~~ll~---~~g~~VLY~GDhi~~Di~~~k~~~gWrT~~Ii~EL 327 (448)
T PF05761_consen 261 TGKLKWGKYVGPLEKGKVYSGGNWDQLHKLLG---WRGKEVLYFGDHIYGDILKSKKRHGWRTAAIIPEL 327 (448)
T ss_dssp TSSEECS---SS--TC-EEEE--HHHHHHHCT-----GGGEEEEESSTTTTHHHHHHHH-SEEEEE-TTH
T ss_pred CCccccccccccccCCCEeecCCHHHHHHHHc---cCCCeEEEECCchhhhhhhhccccceEEEEEehhh
Confidence 111 011 1123667788888 8999999999999 999988887 99999996543
|
1.3.5 from EC, specific for purines (IMP and GMP) []. These enzymes are members of the Haloacid Dehalogenase (HAD) superfamily. HAD members are recognised by three short motifs {hhhhDxDx(T/V)}, {hhhh(T/S)}, and either {hhhh(D/E)(D/E)x(3-4)(G/N)} or {hhhh(G/N)(D/E)x(3-4)(D/E)} (where "h" stands for a hydrophobic residue). Crystal structures of many HAD enzymes has verified PSI-PRED predictions of secondary structural elements which show each of the "hhhh" sequences of the motifs as part of beta sheets. This subfamily of enzymes is part of "Subfamily I" of the HAD superfamily by virtue of a "cap" domain in between motifs 1 and 2. This subfamily's cap domain has a different predicted secondary structure than all other known HAD enzymes and thus has been designated "subfamily IG", the domain appears to consist of a mixed alpha/beta fold.; PDB: 2BDE_A 2XCW_A 2XCX_A 2XCV_A 2XJB_A 2JCM_A 2XJE_A 2J2C_A 2XJF_A 2XJD_A .... |
| >TIGR01647 ATPase-IIIA_H plasma-membrane proton-efflux P-type ATPase | Back alignment and domain information |
|---|
Probab=98.30 E-value=9.4e-07 Score=78.17 Aligned_cols=113 Identities=14% Similarity=0.056 Sum_probs=77.3
Q ss_pred CCCCccHHHHHHHHHhCCCCEEEEeCChhhHHHHHHhhhhhhhhhcceeeeCCCC----C----------------ccCC
Q 026543 93 SELMPGASHLIRHLHAKGIPMCVATGSLARHFELKTQKHRELFSLMHHVVRGDDP----E----------------VKQG 152 (237)
Q Consensus 93 ~~~~~~~~~~l~~l~~~g~~v~i~s~~~~~~~~~~~~~~~gl~~~f~~~~~~~~~----~----------------~~~~ 152 (237)
.++.|++++.++.|++.|+++.++|+ +.......+.+.+|+... ++.++.. + ....
T Consensus 441 Dp~R~~a~~aI~~l~~aGI~v~miTG-D~~~tA~~IA~~lGI~~~---~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfA 516 (755)
T TIGR01647 441 DPPRHDTKETIERARHLGVEVKMVTG-DHLAIAKETARRLGLGTN---IYTADVLLKGDNRDDLPSGELGEMVEDADGFA 516 (755)
T ss_pred CCChhhHHHHHHHHHHCCCeEEEECC-CCHHHHHHHHHHcCCCCC---CcCHHHhcCCcchhhCCHHHHHHHHHhCCEEE
Confidence 47899999999999999999999998 554556677888888531 1111100 0 0122
Q ss_pred CCCHHHHHHHHHHcCCCCCCCCcEEEEecCHHHHHHHHHcCCeEEEEcCCCCCcccccchhhh
Q 026543 153 KPSPDIFLAAAKRFEGGPIDSQEILVFEDAPSGVLAAKNAGMSVVMVPDPRLDSSYHSNADQL 215 (237)
Q Consensus 153 kp~~~~~~~~l~~~~~~~~~~~~~~~igD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~ 215 (237)
+-.|+-...+.+.+. -....+.|+||+.||..+.+.|. ++++.+...+..+..+|.+
T Consensus 517 r~~Pe~K~~iV~~lq---~~G~~VamvGDGvNDapAL~~Ad---VGIAm~~gtdvAkeaADiv 573 (755)
T TIGR01647 517 EVFPEHKYEIVEILQ---KRGHLVGMTGDGVNDAPALKKAD---VGIAVAGATDAARSAADIV 573 (755)
T ss_pred ecCHHHHHHHHHHHH---hcCCEEEEEcCCcccHHHHHhCC---eeEEecCCcHHHHHhCCEE
Confidence 335666777777776 56678999999999999999999 5555554433334444443
|
This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast. |
| >TIGR01523 ATPase-IID_K-Na potassium and/or sodium efflux P-type ATPase, fungal-type | Back alignment and domain information |
|---|
Probab=98.24 E-value=2e-06 Score=78.49 Aligned_cols=116 Identities=13% Similarity=0.071 Sum_probs=80.8
Q ss_pred CCCCccHHHHHHHHHhCCCCEEEEeCChhhHHHHHHhhhhhhhhh----------cceeeeCCCCCc-------------
Q 026543 93 SELMPGASHLIRHLHAKGIPMCVATGSLARHFELKTQKHRELFSL----------MHHVVRGDDPEV------------- 149 (237)
Q Consensus 93 ~~~~~~~~~~l~~l~~~g~~v~i~s~~~~~~~~~~~~~~~gl~~~----------f~~~~~~~~~~~------------- 149 (237)
.++.+++.+.++.|++.|++++++|+ +.......+.+.+|+... -+.++.|. +.
T Consensus 645 Dp~r~~v~~aI~~l~~aGIkv~MiTG-D~~~tA~~iA~~~Gi~~~~~~~~~~~~~~~~vitG~--~l~~l~~~~l~~~~~ 721 (1053)
T TIGR01523 645 DPPRNESAGAVEKCHQAGINVHMLTG-DFPETAKAIAQEVGIIPPNFIHDRDEIMDSMVMTGS--QFDALSDEEVDDLKA 721 (1053)
T ss_pred cCCchhHHHHHHHHHHCCCEEEEECC-CCHHHHHHHHHHcCCCCccccccccccccceeeehH--HhhhcCHHHHHHHhh
Confidence 47899999999999999999999998 444455567888888432 12344443 11
Q ss_pred ---cCCCCCHHHHHHHHHHcCCCCCCCCcEEEEecCHHHHHHHHHcCCeEEEEcCC-CCCcccccchhhhhh
Q 026543 150 ---KQGKPSPDIFLAAAKRFEGGPIDSQEILVFEDAPSGVLAAKNAGMSVVMVPDP-RLDSSYHSNADQLLS 217 (237)
Q Consensus 150 ---~~~kp~~~~~~~~l~~~~~~~~~~~~~~~igD~~~Di~~a~~~G~~~i~v~~~-~~~~~~~~~~~~~~~ 217 (237)
-...-.|+-...+.+.+. -....+.|+||+.||..+.+.|. ++|++| ...+..+..+|.++.
T Consensus 722 ~~~V~ar~sP~~K~~iV~~lq---~~g~~Vam~GDGvNDapaLk~Ad---VGIAmg~~gt~vak~aADivl~ 787 (1053)
T TIGR01523 722 LCLVIARCAPQTKVKMIEALH---RRKAFCAMTGDGVNDSPSLKMAN---VGIAMGINGSDVAKDASDIVLS 787 (1053)
T ss_pred cCeEEEecCHHHHHHHHHHHH---hcCCeeEEeCCCcchHHHHHhCC---ccEecCCCccHHHHHhcCEEEe
Confidence 123345666667777776 55567999999999999999999 666665 233334556666653
|
The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump. |
| >COG5663 Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=98.13 E-value=3.5e-05 Score=53.77 Aligned_cols=112 Identities=22% Similarity=0.232 Sum_probs=68.6
Q ss_pred CCHHHHHHHHHHHHHhhcCCCCCCccHHHHHHHHHhCCCCEEEEeCChhhHHH--HHHhhhhhhhhhcceeeeCCCCCcc
Q 026543 73 LSAEDFLVQREETLQTLFPTSELMPGASHLIRHLHAKGIPMCVATGSLARHFE--LKTQKHRELFSLMHHVVRGDDPEVK 150 (237)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~v~i~s~~~~~~~~--~~~~~~~gl~~~f~~~~~~~~~~~~ 150 (237)
.+.+++.+++++......++.....++...|..++++ .+++.+|........ ..++..- ...+|.+.-.. .
T Consensus 51 i~~ee~~k~~e~~ea~l~ke~l~~q~v~~~L~~~~e~-~~L~~itar~~dl~~iT~~~l~~q--~ih~~~l~i~g----~ 123 (194)
T COG5663 51 ITTEEFWKWMEQTEAWLYKEALLAQLVKQVLPSLKEE-HRLIYITARKADLTRITYAWLFIQ--NIHYDHLEIVG----L 123 (194)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhh-ceeeeeehhhHHHHHHHHHHHHHh--ccchhhhhhhc----c
Confidence 4456666666555444444566778888899999988 577778774443322 1122111 11233322111 1
Q ss_pred CCCCCHHHHHHHHHHcCCCCCCCCcEEEEecCH-HHHHHHHHcCCeEEEEcCCCC
Q 026543 151 QGKPSPDIFLAAAKRFEGGPIDSQEILVFEDAP-SGVLAAKNAGMSVVMVPDPRL 204 (237)
Q Consensus 151 ~~kp~~~~~~~~l~~~~~~~~~~~~~~~igD~~-~Di~~a~~~G~~~i~v~~~~~ 204 (237)
..| -...+.++ ++ +++.|+. |-.+.|+++|++++.+.+..+
T Consensus 124 h~K------V~~vrth~---id----lf~ed~~~na~~iAk~~~~~vilins~yn 165 (194)
T COG5663 124 HHK------VEAVRTHN---ID----LFFEDSHDNAGQIAKNAGIPVILINSPYN 165 (194)
T ss_pred ccc------chhhHhhc---cC----ccccccCchHHHHHHhcCCcEEEecCccc
Confidence 122 22455666 55 8899998 888889999999999998776
|
|
| >PLN02645 phosphoglycolate phosphatase | Back alignment and domain information |
|---|
Probab=98.06 E-value=4.2e-05 Score=60.83 Aligned_cols=89 Identities=11% Similarity=0.083 Sum_probs=67.4
Q ss_pred CCccHHHHHHHHHhCCCCEEEEeCChhhH---HHHHHhhhhhhhhhcceeeeCCCCCccCCCCCHHHHHHHHHHcCCCCC
Q 026543 95 LMPGASHLIRHLHAKGIPMCVATGSLARH---FELKTQKHRELFSLMHHVVRGDDPEVKQGKPSPDIFLAAAKRFEGGPI 171 (237)
Q Consensus 95 ~~~~~~~~l~~l~~~g~~v~i~s~~~~~~---~~~~~~~~~gl~~~f~~~~~~~~~~~~~~kp~~~~~~~~l~~~~~~~~ 171 (237)
++||+.++++.|+++|++++++||+.... ... .++.+|+...++.++++. ......+++.+ .
T Consensus 45 ~~~ga~e~l~~lr~~g~~~~~~TN~~~~~~~~~~~-~l~~lGi~~~~~~I~ts~-----------~~~~~~l~~~~---~ 109 (311)
T PLN02645 45 LIEGVPETLDMLRSMGKKLVFVTNNSTKSRAQYGK-KFESLGLNVTEEEIFSSS-----------FAAAAYLKSIN---F 109 (311)
T ss_pred cCcCHHHHHHHHHHCCCEEEEEeCCCCCCHHHHHH-HHHHCCCCCChhhEeehH-----------HHHHHHHHhhc---c
Confidence 67999999999999999999999977332 232 245677776667776554 24566677766 6
Q ss_pred CCCcEEEEecCHHHHHHHHHcCCeEEE
Q 026543 172 DSQEILVFEDAPSGVLAAKNAGMSVVM 198 (237)
Q Consensus 172 ~~~~~~~igD~~~Di~~a~~~G~~~i~ 198 (237)
.....++++++..+.+.++.+|+..+.
T Consensus 110 ~~~~~V~viG~~~~~~~l~~~Gi~~~~ 136 (311)
T PLN02645 110 PKDKKVYVIGEEGILEELELAGFQYLG 136 (311)
T ss_pred CCCCEEEEEcCHHHHHHHHHCCCEEec
Confidence 555678898999999999999987654
|
|
| >COG2503 Predicted secreted acid phosphatase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.04 E-value=3.9e-05 Score=56.89 Aligned_cols=84 Identities=14% Similarity=0.200 Sum_probs=55.1
Q ss_pred CCCCCccHHHHHHHHHhCCCCEEEEeCChhhH-H--HHHHhhhhhhhhhcc-eeeeCCCCCccCCCCCHHHHHHHHHHcC
Q 026543 92 TSELMPGASHLIRHLHAKGIPMCVATGSLARH-F--ELKTQKHRELFSLMH-HVVRGDDPEVKQGKPSPDIFLAAAKRFE 167 (237)
Q Consensus 92 ~~~~~~~~~~~l~~l~~~g~~v~i~s~~~~~~-~--~~~~~~~~gl~~~f~-~~~~~~~~~~~~~kp~~~~~~~~l~~~~ 167 (237)
...+.||+.+++...-++|..|+.+||+..+. . ...-++..|+..... .++.-. ..+++..-++.+-+.+
T Consensus 120 ~sk~vpGA~eFl~Yvn~~Gg~ifyiSNR~~~~~~~~T~~nLk~~g~~~~~~~~~llkk-----~~k~Ke~R~~~v~k~~- 193 (274)
T COG2503 120 KSKAVPGAVEFLNYVNSNGGKIFYISNRDQENEKDGTIENLKSEGLPQVLESHLLLKK-----DKKSKEVRRQAVEKDY- 193 (274)
T ss_pred ccccCccHHHHHHHHHhcCcEEEEEeccchhcccchhHHHHHHcCcccccccceEEee-----CCCcHHHHHHHHhhcc-
Confidence 36799999999999999999999999987765 1 222355556655433 222112 2344444444444433
Q ss_pred CCCCCCCcEEEEecCHHHHH
Q 026543 168 GGPIDSQEILVFEDAPSGVL 187 (237)
Q Consensus 168 ~~~~~~~~~~~igD~~~Di~ 187 (237)
+-++.|||+..|.-
T Consensus 194 ------~iVm~vGDNl~DF~ 207 (274)
T COG2503 194 ------KIVMLVGDNLDDFG 207 (274)
T ss_pred ------ceeeEecCchhhhc
Confidence 46899999997753
|
|
| >COG0474 MgtA Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.02 E-value=1.2e-05 Score=72.64 Aligned_cols=101 Identities=15% Similarity=0.139 Sum_probs=75.0
Q ss_pred CCCCCccHHHHHHHHHhCCCCEEEEeCChhhHHHHHHhhhhhhhhhc--ceeeeCCC--------------CCccCCCCC
Q 026543 92 TSELMPGASHLIRHLHAKGIPMCVATGSLARHFELKTQKHRELFSLM--HHVVRGDD--------------PEVKQGKPS 155 (237)
Q Consensus 92 ~~~~~~~~~~~l~~l~~~g~~v~i~s~~~~~~~~~~~~~~~gl~~~f--~~~~~~~~--------------~~~~~~kp~ 155 (237)
..++.+++++.++.|+++|++++++|+ +.......+.+.+|+..-- +.++.|.. ......+-.
T Consensus 545 ~Dppr~~v~~aI~~l~~AGI~v~MiTG-D~~~TA~aIa~~~Gi~~~~~~~~vi~G~el~~l~~~el~~~~~~~~VfARvs 623 (917)
T COG0474 545 EDPPREDVKEAIEELREAGIKVWMITG-DHVETAIAIAKECGIEAEAESALVIDGAELDALSDEELAELVEELSVFARVS 623 (917)
T ss_pred cCCCCccHHHHHHHHHHCCCcEEEECC-CCHHHHHHHHHHcCCCCCCCceeEeehHHhhhcCHHHHHHHhhhCcEEEEcC
Confidence 368999999999999999999999998 5556666788888865543 23554430 001223446
Q ss_pred HHHHHHHHHHcCCCCCCCCcEEEEecCHHHHHHHHHcCCeE
Q 026543 156 PDIFLAAAKRFEGGPIDSQEILVFEDAPSGVLAAKNAGMSV 196 (237)
Q Consensus 156 ~~~~~~~l~~~~~~~~~~~~~~~igD~~~Di~~a~~~G~~~ 196 (237)
|+-...+.+.+. -...-+.|.||+.||+.|.+.|.+..
T Consensus 624 P~qK~~IV~~lq---~~g~vVamtGDGvNDapALk~ADVGI 661 (917)
T COG0474 624 PEQKARIVEALQ---KSGHVVAMTGDGVNDAPALKAADVGI 661 (917)
T ss_pred HHHHHHHHHHHH---hCCCEEEEeCCCchhHHHHHhcCccE
Confidence 667777777776 55678999999999999999999543
|
|
| >KOG0202 consensus Ca2+ transporting ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.02 E-value=1e-05 Score=69.78 Aligned_cols=114 Identities=15% Similarity=0.151 Sum_probs=81.3
Q ss_pred CCCCccHHHHHHHHHhCCCCEEEEeCChhhHHHHHHhhhhhhhhhcc----eeeeCCCCCc----------------cCC
Q 026543 93 SELMPGASHLIRHLHAKGIPMCVATGSLARHFELKTQKHRELFSLMH----HVVRGDDPEV----------------KQG 152 (237)
Q Consensus 93 ~~~~~~~~~~l~~l~~~g~~v~i~s~~~~~~~~~~~~~~~gl~~~f~----~~~~~~~~~~----------------~~~ 152 (237)
.+|++++++.++.|++.|++|.++|+ +.......+.+..|+...-+ ..++|. +. -..
T Consensus 583 DPPR~ev~~ai~~c~~aGIrV~mITG-D~~~TA~AI~r~iGi~~~~ed~~~~~~TG~--efD~ls~~~~~~~~~~~~vFa 659 (972)
T KOG0202|consen 583 DPPRPEVADAIELCRQAGIRVIMITG-DNKETAEAIAREIGIFSEDEDVSSMALTGS--EFDDLSDEELDDAVRRVLVFA 659 (972)
T ss_pred CCCchhHHHHHHHHHHcCCEEEEEcC-CCHHHHHHHHHHhCCCcCCccccccccchh--hhhcCCHHHHHHHhhcceEEE
Confidence 57899999999999999999999998 55556667888888755444 334443 11 012
Q ss_pred CCCHHHHHHHHHHcCCCCCCCCcEEEEecCHHHHHHHHHcCCeEEEEcCC-CCCcccccchhhh
Q 026543 153 KPSPDIFLAAAKRFEGGPIDSQEILVFEDAPSGVLAAKNAGMSVVMVPDP-RLDSSYHSNADQL 215 (237)
Q Consensus 153 kp~~~~~~~~l~~~~~~~~~~~~~~~igD~~~Di~~a~~~G~~~i~v~~~-~~~~~~~~~~~~~ 215 (237)
+-.|....++.+.++ -..+=+.|-||+.||..+.+.|. |+|++| ......+..+|.+
T Consensus 660 R~~P~HK~kIVeaLq---~~geivAMTGDGVNDApALK~Ad---IGIAMG~~GTdVaKeAsDMV 717 (972)
T KOG0202|consen 660 RAEPQHKLKIVEALQ---SRGEVVAMTGDGVNDAPALKKAD---IGIAMGISGTDVAKEASDMV 717 (972)
T ss_pred ecCchhHHHHHHHHH---hcCCEEEecCCCccchhhhhhcc---cceeecCCccHhhHhhhhcE
Confidence 335666777777777 56677889999999999999999 777777 3333334444443
|
|
| >TIGR00685 T6PP trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=98.00 E-value=3e-06 Score=64.96 Aligned_cols=66 Identities=11% Similarity=-0.110 Sum_probs=53.6
Q ss_pred CCHHHHHHHHHHcCCCCCCCCcEEEEecCHHHHHHHHHc-------CCeEEEEcCCCCCcccccchhhhhhhhcccCCCC
Q 026543 154 PSPDIFLAAAKRFEGGPIDSQEILVFEDAPSGVLAAKNA-------GMSVVMVPDPRLDSSYHSNADQLLSSLLGFNPKD 226 (237)
Q Consensus 154 p~~~~~~~~l~~~~~~~~~~~~~~~igD~~~Di~~a~~~-------G~~~i~v~~~~~~~~~~~~~~~~~~~~~el~~~l 226 (237)
.|...+.+++++++ ++++++++|||+.+|+.+++.+ |..++.|..+. ....+++++++..++...|
T Consensus 167 ~Kg~a~~~~~~~~~---~~~~~~i~iGD~~~D~~~~~~~~~~~~~~g~~~v~v~~g~----~~~~A~~~~~~~~~v~~~L 239 (244)
T TIGR00685 167 NKGEIVKRLLWHQP---GSGISPVYLGDDITDEDAFRVVNNQWGNYGFYPVPIGSGS----KKTVAKFHLTGPQQVLEFL 239 (244)
T ss_pred CHHHHHHHHHHhcc---cCCCceEEEcCCCcHHHHHHHHhcccCCCCeEEEEEecCC----cCCCceEeCCCHHHHHHHH
Confidence 34689999999999 9999999999999999999999 66667675342 3567888888888876554
|
At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes. |
| >PLN02423 phosphomannomutase | Back alignment and domain information |
|---|
Probab=98.00 E-value=8.6e-07 Score=67.92 Aligned_cols=45 Identities=20% Similarity=0.103 Sum_probs=35.5
Q ss_pred cCCCCCHHHHHHHHHHcCCCCCCCCcEEEEec----CHHHHHHHHHcCCeEEEEcCC
Q 026543 150 KQGKPSPDIFLAAAKRFEGGPIDSQEILVFED----APSGVLAAKNAGMSVVMVPDP 202 (237)
Q Consensus 150 ~~~kp~~~~~~~~l~~~~~~~~~~~~~~~igD----~~~Di~~a~~~G~~~i~v~~~ 202 (237)
..+..|..+++.++ +++++++||| +.||++|.+.-|+.++-|..+
T Consensus 185 ~~gvnKg~al~~L~--------~~~e~~aFGD~~~~~~ND~eMl~~~~~~~~~~~~~ 233 (245)
T PLN02423 185 PQGWDKTYCLQFLE--------DFDEIHFFGDKTYEGGNDHEIFESERTIGHTVTSP 233 (245)
T ss_pred eCCCCHHHHHHHhc--------CcCeEEEEeccCCCCCCcHHHHhCCCcceEEeCCH
Confidence 34455566666665 5789999999 689999999999998888664
|
|
| >TIGR01106 ATPase-IIC_X-K sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit | Back alignment and domain information |
|---|
Probab=97.95 E-value=1.7e-05 Score=72.47 Aligned_cols=119 Identities=19% Similarity=0.152 Sum_probs=78.6
Q ss_pred CCCCccHHHHHHHHHhCCCCEEEEeCChhhHHHHHHhhhhhhhhhc------------------------ceeeeCCCC-
Q 026543 93 SELMPGASHLIRHLHAKGIPMCVATGSLARHFELKTQKHRELFSLM------------------------HHVVRGDDP- 147 (237)
Q Consensus 93 ~~~~~~~~~~l~~l~~~g~~v~i~s~~~~~~~~~~~~~~~gl~~~f------------------------~~~~~~~~~- 147 (237)
.++.+++.+.++.|+++|++++++|+..... ...+.+.+|+...- ..++.|..-
T Consensus 567 Dplr~~v~~aI~~l~~~Gi~v~~~TGd~~~t-a~~ia~~~gi~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~vi~G~~l~ 645 (997)
T TIGR01106 567 DPPRAAVPDAVGKCRSAGIKVIMVTGDHPIT-AKAIAKGVGIISEGNETVEDIAARLNIPVSQVNPRDAKACVVHGSDLK 645 (997)
T ss_pred CCChHHHHHHHHHHHHCCCeEEEECCCCHHH-HHHHHHHcCCCCCCccchhhhhhhccccccccccccccceEEEhHHhh
Confidence 3678999999999999999999999965554 44566766763210 123333200
Q ss_pred ---------------CccCCCCCHHHHHHHHHHcCCCCCCCCcEEEEecCHHHHHHHHHcCCeEEEEcCCCC-Ccccccc
Q 026543 148 ---------------EVKQGKPSPDIFLAAAKRFEGGPIDSQEILVFEDAPSGVLAAKNAGMSVVMVPDPRL-DSSYHSN 211 (237)
Q Consensus 148 ---------------~~~~~kp~~~~~~~~l~~~~~~~~~~~~~~~igD~~~Di~~a~~~G~~~i~v~~~~~-~~~~~~~ 211 (237)
..-..+-.|+-...+.+.+. -...-+.|+||+.||+.|.+.|. ++|+.|.. .+..+..
T Consensus 646 ~l~~~el~~~~~~~~~~VfaR~sPeqK~~IV~~lq---~~g~vv~~~GDG~ND~paLk~Ad---VGiamg~~G~~vak~a 719 (997)
T TIGR01106 646 DMTSEQLDEILKYHTEIVFARTSPQQKLIIVEGCQ---RQGAIVAVTGDGVNDSPALKKAD---IGVAMGIAGSDVSKQA 719 (997)
T ss_pred hCCHHHHHHHHHhcCCEEEEECCHHHHHHHHHHHH---HCCCEEEEECCCcccHHHHhhCC---cceecCCcccHHHHHh
Confidence 00223345666666666665 44567999999999999999999 66766643 3334555
Q ss_pred hhhhhhh
Q 026543 212 ADQLLSS 218 (237)
Q Consensus 212 ~~~~~~~ 218 (237)
+|+++.+
T Consensus 720 ADivL~d 726 (997)
T TIGR01106 720 ADMILLD 726 (997)
T ss_pred hceEEec
Confidence 6666544
|
Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps. |
| >KOG0207 consensus Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.94 E-value=2.6e-05 Score=67.97 Aligned_cols=86 Identities=15% Similarity=0.183 Sum_probs=64.5
Q ss_pred CCCCccHHHHHHHHHhCCCCEEEEeCChhhHHHHHHhhhhhhhhhcceeeeCCCCCccCCCCCHHHHHHHHHHcCCCCCC
Q 026543 93 SELMPGASHLIRHLHAKGIPMCVATGSLARHFELKTQKHRELFSLMHHVVRGDDPEVKQGKPSPDIFLAAAKRFEGGPID 172 (237)
Q Consensus 93 ~~~~~~~~~~l~~l~~~g~~v~i~s~~~~~~~~~~~~~~~gl~~~f~~~~~~~~~~~~~~kp~~~~~~~~l~~~~~~~~~ 172 (237)
..+.|++...+..|++.|++++++|+ +.........+..| ++.+++.- + |+-.....+++. -.
T Consensus 722 D~vr~~a~~av~~Lk~~Gi~v~mLTG-Dn~~aA~svA~~VG----i~~V~aev-------~--P~~K~~~Ik~lq---~~ 784 (951)
T KOG0207|consen 722 DQVRPDAALAVAELKSMGIKVVMLTG-DNDAAARSVAQQVG----IDNVYAEV-------L--PEQKAEKIKEIQ---KN 784 (951)
T ss_pred cccchhHHHHHHHHHhcCceEEEEcC-CCHHHHHHHHHhhC----cceEEecc-------C--chhhHHHHHHHH---hc
Confidence 57899999999999999999999998 55555666777777 56666443 2 223344555555 45
Q ss_pred CCcEEEEecCHHHHHHHHHcCCe
Q 026543 173 SQEILVFEDAPSGVLAAKNAGMS 195 (237)
Q Consensus 173 ~~~~~~igD~~~Di~~a~~~G~~ 195 (237)
...+.||||+.||-.+...+.+.
T Consensus 785 ~~~VaMVGDGINDaPALA~AdVG 807 (951)
T KOG0207|consen 785 GGPVAMVGDGINDAPALAQADVG 807 (951)
T ss_pred CCcEEEEeCCCCccHHHHhhccc
Confidence 56899999999999999988733
|
|
| >PF05152 DUF705: Protein of unknown function (DUF705); InterPro: IPR007827 This family contains uncharacterised baculoviral proteins | Back alignment and domain information |
|---|
Probab=97.85 E-value=0.00016 Score=55.16 Aligned_cols=87 Identities=16% Similarity=0.201 Sum_probs=64.8
Q ss_pred CCccHHHHHHHHHhCCCCEEEEeCChhhHHHHHHhhhhhhhhhcceeeeCCC---------------------------C
Q 026543 95 LMPGASHLIRHLHAKGIPMCVATGSLARHFELKTQKHRELFSLMHHVVRGDD---------------------------P 147 (237)
Q Consensus 95 ~~~~~~~~l~~l~~~g~~v~i~s~~~~~~~~~~~~~~~gl~~~f~~~~~~~~---------------------------~ 147 (237)
..|.+.+.|..|++.|..+++=|-|+.+++... ++.+++.++||.++++.. .
T Consensus 143 r~~~v~~sL~~Lk~~g~vLvLWSyG~~eHV~~s-l~~~~L~~~Fd~ii~~G~~~~~~~~~~~~d~~~~~~f~~~~FylDv 221 (297)
T PF05152_consen 143 RDPAVYDSLRELKEQGCVLVLWSYGNREHVRHS-LKELKLEGYFDIIICGGNKAGEYNSRVIVDRQYKVIFVSKPFYLDV 221 (297)
T ss_pred CChHHHHHHHHHHHcCCEEEEecCCCHHHHHHH-HHHhCCccccEEEEeCCccCCcCCccceeecccceEEeccceEEeC
Confidence 455666788899999999999999999988864 677899999999997640 0
Q ss_pred Ccc--CCCCCHHHHHHHHHHcCCCCCCC-CcEEEEecCH-HHH
Q 026543 148 EVK--QGKPSPDIFLAAAKRFEGGPIDS-QEILVFEDAP-SGV 186 (237)
Q Consensus 148 ~~~--~~kp~~~~~~~~l~~~~~~~~~~-~~~~~igD~~-~Di 186 (237)
+.. -+| +|....+.|++.| +.. +.+..|+|=. ||+
T Consensus 222 ~~~~~LPK-SPrVVL~yL~k~g---vny~KtiTLVDDL~~Nn~ 260 (297)
T PF05152_consen 222 TNVNNLPK-SPRVVLWYLRKKG---VNYFKTITLVDDLKSNNY 260 (297)
T ss_pred CcCCCCCC-CCeehHHHHHHcC---CceeeeEEEeccCcccCc
Confidence 000 122 5678889999999 775 5567778776 554
|
|
| >TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB | Back alignment and domain information |
|---|
Probab=97.83 E-value=2.5e-05 Score=58.19 Aligned_cols=46 Identities=24% Similarity=0.276 Sum_probs=41.6
Q ss_pred ccCCCCCHHHHHHHHHHcCCCCCCCCcEEEEecCHHHHHHHHHcCCeEE
Q 026543 149 VKQGKPSPDIFLAAAKRFEGGPIDSQEILVFEDAPSGVLAAKNAGMSVV 197 (237)
Q Consensus 149 ~~~~kp~~~~~~~~l~~~~~~~~~~~~~~~igD~~~Di~~a~~~G~~~i 197 (237)
.+.+.+|+.+++.++++++ ++++++++|||+.||+.+++.+|+..+
T Consensus 158 ~p~~~~K~~~~~~~~~~~~---~~~~~~~~~GD~~nD~~~~~~~~~~va 203 (204)
T TIGR01484 158 LPAGVDKGSALQALLKELN---GKRDEILAFGDSGNDEEMFEVAGLAVA 203 (204)
T ss_pred ecCCCChHHHHHHHHHHhC---CCHHHEEEEcCCHHHHHHHHHcCCceE
Confidence 3457888999999999999 999999999999999999999997654
|
The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear. |
| >TIGR02250 FCP1_euk FCP1-like phosphatase, phosphatase domain | Back alignment and domain information |
|---|
Probab=97.81 E-value=5.1e-05 Score=53.84 Aligned_cols=85 Identities=14% Similarity=0.128 Sum_probs=61.8
Q ss_pred CCCCCccHHHHHHHHHhCCCCEEEEeCChhhHHHHHHhhhhhhh-hhc-ceeeeCCCCCccCCCCCHHHHHHHH-HHcCC
Q 026543 92 TSELMPGASHLIRHLHAKGIPMCVATGSLARHFELKTQKHRELF-SLM-HHVVRGDDPEVKQGKPSPDIFLAAA-KRFEG 168 (237)
Q Consensus 92 ~~~~~~~~~~~l~~l~~~g~~v~i~s~~~~~~~~~~~~~~~gl~-~~f-~~~~~~~~~~~~~~kp~~~~~~~~l-~~~~~ 168 (237)
.+.++||+.++|+.+++. +.++|+|++...+.. .+++.++.. .+| +.+++.+ +.. .+ +.+-+ .-++
T Consensus 56 ~v~~rPgv~efL~~l~~~-yel~I~T~~~~~yA~-~vl~~ldp~~~~F~~ri~~rd--~~~--~~----~~KdL~~i~~- 124 (156)
T TIGR02250 56 LTKLRPFLHEFLKEASKL-YEMHVYTMGTRAYAQ-AIAKLIDPDGKYFGDRIISRD--ESG--SP----HTKSLLRLFP- 124 (156)
T ss_pred EEEECCCHHHHHHHHHhh-cEEEEEeCCcHHHHH-HHHHHhCcCCCeeccEEEEec--cCC--CC----ccccHHHHcC-
Confidence 377899999999999976 999999998777655 578888877 478 6777766 322 11 11223 3357
Q ss_pred CCCCCCcEEEEecCHHHHHHH
Q 026543 169 GPIDSQEILVFEDAPSGVLAA 189 (237)
Q Consensus 169 ~~~~~~~~~~igD~~~Di~~a 189 (237)
.+.+.+++|+|++.-...-
T Consensus 125 --~d~~~vvivDd~~~~~~~~ 143 (156)
T TIGR02250 125 --ADESMVVIIDDREDVWPWH 143 (156)
T ss_pred --CCcccEEEEeCCHHHhhcC
Confidence 7889999999999544443
|
This domain is related to domains found in the human NLI interacting factor-like phosphatases, and together both are detected by the Pfam model pfam03031. |
| >TIGR01652 ATPase-Plipid phospholipid-translocating P-type ATPase, flippase | Back alignment and domain information |
|---|
Probab=97.76 E-value=5.2e-05 Score=69.88 Aligned_cols=128 Identities=17% Similarity=0.154 Sum_probs=77.3
Q ss_pred CCCCccHHHHHHHHHhCCCCEEEEeCChhhHHHHHHhhhhhhhhhcc---------------------------------
Q 026543 93 SELMPGASHLIRHLHAKGIPMCVATGSLARHFELKTQKHRELFSLMH--------------------------------- 139 (237)
Q Consensus 93 ~~~~~~~~~~l~~l~~~g~~v~i~s~~~~~~~~~~~~~~~gl~~~f~--------------------------------- 139 (237)
.++.+++.+.++.|++.|++++++|+... .....+.+..|+...-.
T Consensus 630 D~lq~~v~etI~~L~~AGIkv~mlTGD~~-~TA~~IA~~~~ii~~~~~~~~i~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 708 (1057)
T TIGR01652 630 DKLQEGVPETIELLRQAGIKIWVLTGDKV-ETAINIGYSCRLLSRNMEQIVITSESLDATRSVEAAIKFGLEGTSEEFNN 708 (1057)
T ss_pred hhhhhccHHHHHHHHHCCCeEEEEcCCcH-HHHHHHHHHhCCCCCCCeEEEEecCchhhhHHHHHHHHHHHHHHHHhhhh
Confidence 57899999999999999999999998443 34434444444422110
Q ss_pred --------eeeeCCC-------------------C-CccCCCCCHHHHHHHHHHcCCCCCC-CCcEEEEecCHHHHHHHH
Q 026543 140 --------HVVRGDD-------------------P-EVKQGKPSPDIFLAAAKRFEGGPID-SQEILVFEDAPSGVLAAK 190 (237)
Q Consensus 140 --------~~~~~~~-------------------~-~~~~~kp~~~~~~~~l~~~~~~~~~-~~~~~~igD~~~Di~~a~ 190 (237)
.++.|+. . .....+-.|.-...+.+.+. -. ...++++||+.||+.|.+
T Consensus 709 ~~~~~~~~lvi~G~~l~~~l~~~~~~~f~~l~~~~~~vV~aR~sP~qK~~IV~~lk---~~~~~~vl~iGDG~ND~~mlk 785 (1057)
T TIGR01652 709 LGDSGNVALVIDGKSLGYALDEELEKEFLQLALKCKAVICCRVSPSQKADVVRLVK---KSTGKTTLAIGDGANDVSMIQ 785 (1057)
T ss_pred hccCCceEEEEccHHHHHHHhhHHHHHHHHHHhhCCEEEEeCCCHHHHHHHHHHHH---hcCCCeEEEEeCCCccHHHHh
Confidence 1222220 0 00112223333444444443 22 467999999999999999
Q ss_pred HcCCeEEEEcCCCCCcccccchhhhhhhhcccCCCC
Q 026543 191 NAGMSVVMVPDPRLDSSYHSNADQLLSSLLGFNPKD 226 (237)
Q Consensus 191 ~~G~~~i~v~~~~~~~~~~~~~~~~~~~~~el~~~l 226 (237)
.|.+.. ++.... .......+|+++.+|..+...+
T Consensus 786 ~AdVGI-gi~g~e-g~qA~~aaD~~i~~F~~L~~ll 819 (1057)
T TIGR01652 786 EADVGV-GISGKE-GMQAVMASDFAIGQFRFLTKLL 819 (1057)
T ss_pred hcCeee-EecChH-HHHHHHhhhhhhhhHHHHHHHH
Confidence 998442 333221 1123557899998888765443
|
This model describes the P-type ATPase responsible for transporting phospholipids from one leaflet of bilayer membranes to the other. These ATPases are found only in eukaryotes. |
| >PF08235 LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 This domain is found in Saccharomyces cerevisiae (Baker's yeast) protein SMP2, proteins with an N-terminal lipin domain (IPR007651 from INTERPRO) and phosphatidylinositol transfer proteins [] | Back alignment and domain information |
|---|
Probab=97.67 E-value=0.00083 Score=47.27 Aligned_cols=97 Identities=20% Similarity=0.228 Sum_probs=55.0
Q ss_pred CCCccHHHHHHHHHhCCCCEEEEeCChhhH--HHHHHhhhh-----hhhhhcceeeeCCC-------CCccCCCCCHHHH
Q 026543 94 ELMPGASHLIRHLHAKGIPMCVATGSLARH--FELKTQKHR-----ELFSLMHHVVRGDD-------PEVKQGKPSPDIF 159 (237)
Q Consensus 94 ~~~~~~~~~l~~l~~~g~~v~i~s~~~~~~--~~~~~~~~~-----gl~~~f~~~~~~~~-------~~~~~~kp~~~~~ 159 (237)
...+|+.++++.+.++||++..+|.+.... ....++... ++.. ..++.+.+ -++. .++|+.|
T Consensus 27 ~~h~g~~~l~~~i~~~GY~ilYlTaRp~~qa~~Tr~~L~~~~q~~~~lP~--Gpv~~sP~~l~~al~rEvi--~~~p~~f 102 (157)
T PF08235_consen 27 WTHPGAAELYRKIADNGYKILYLTARPIGQANRTRSWLAQHQQQGHNLPD--GPVLLSPDSLFSALHREVI--SKDPEEF 102 (157)
T ss_pred hhhhcHHHHHHHHHHCCeEEEEECcCcHHHHHHHHHHHHHHHhCCccCCC--CCEEECCcchhhhhhcccc--ccChHHH
Confidence 367899999999999999999999876433 233444433 2211 12222210 0111 2234333
Q ss_pred HH-HHHHcCCCCCC-CCc--EEEEecCHHHHHHHHHcCCe
Q 026543 160 LA-AAKRFEGGPID-SQE--ILVFEDAPSGVLAAKNAGMS 195 (237)
Q Consensus 160 ~~-~l~~~~~~~~~-~~~--~~~igD~~~Di~~a~~~G~~ 195 (237)
.. .|+.+.. ..+ ... ...+|++.+|+.+=+++|++
T Consensus 103 K~~~L~~l~~-~f~~~~~pf~agfGN~~tDv~aY~~vGip 141 (157)
T PF08235_consen 103 KIACLRDLRA-LFPPDGNPFYAGFGNRSTDVIAYKAVGIP 141 (157)
T ss_pred HHHHHHHHHH-hcCCCCCeEEEecCCcHHHHHHHHHcCCC
Confidence 32 3333320 011 122 34579999999999999986
|
SMP2 is involved in plasmid maintenance and respiration []. Lipin proteins are involved in adipose tissue development and insulin resistance []. |
| >TIGR01689 EcbF-BcbF capsule biosynthesis phosphatase | Back alignment and domain information |
|---|
Probab=97.62 E-value=0.00045 Score=46.92 Aligned_cols=30 Identities=17% Similarity=0.286 Sum_probs=24.6
Q ss_pred CCCccHHHHHHHHHhCCCCEEEEeCChhhH
Q 026543 94 ELMPGASHLIRHLHAKGIPMCVATGSLARH 123 (237)
Q Consensus 94 ~~~~~~~~~l~~l~~~g~~v~i~s~~~~~~ 123 (237)
.+.+++.+.++.++++|+.++++|++....
T Consensus 24 ~~~~~~ie~L~~l~~~G~~IiiaTGR~~~~ 53 (126)
T TIGR01689 24 APILAVIEKLRHYKALGFEIVISSSRNMRT 53 (126)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEECCCCchh
Confidence 367778888899999999999999876553
|
Due to the likelihood that the substrates of these enzymes are different depending on the nature of the particular polysaccharides associated with each species, this model has been classified as a subfamily despite the close homology. |
| >TIGR01657 P-ATPase-V P-type ATPase of unknown pump specificity (type V) | Back alignment and domain information |
|---|
Probab=97.62 E-value=0.00033 Score=64.67 Aligned_cols=42 Identities=17% Similarity=0.299 Sum_probs=34.2
Q ss_pred CCCCccHHHHHHHHHhCCCCEEEEeCChhhHHHHHHhhhhhhh
Q 026543 93 SELMPGASHLIRHLHAKGIPMCVATGSLARHFELKTQKHRELF 135 (237)
Q Consensus 93 ~~~~~~~~~~l~~l~~~g~~v~i~s~~~~~~~~~~~~~~~gl~ 135 (237)
.++.|++.+.++.|+++|++++++|+. .......+.+..|+.
T Consensus 655 d~lr~~~~~~I~~l~~agi~v~miTGD-~~~TA~~iA~~~gii 696 (1054)
T TIGR01657 655 NPLKPDTKEVIKELKRASIRTVMITGD-NPLTAVHVARECGIV 696 (1054)
T ss_pred cCCCccHHHHHHHHHHCCCeEEEECCC-CHHHHHHHHHHcCCC
Confidence 478999999999999999999999984 444555567777774
|
These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in. |
| >TIGR01658 EYA-cons_domain eyes absent protein conserved domain | Back alignment and domain information |
|---|
Probab=97.61 E-value=0.0063 Score=45.64 Aligned_cols=64 Identities=16% Similarity=0.070 Sum_probs=50.0
Q ss_pred hhhhhhcc--eeeeCCCCCccCCCCCHHHHHHHHHHcCCCCCCCCcEEEEecCHHHHHHHHHcCCeEEEEcCCCC
Q 026543 132 RELFSLMH--HVVRGDDPEVKQGKPSPDIFLAAAKRFEGGPIDSQEILVFEDAPSGVLAAKNAGMSVVMVPDPRL 204 (237)
Q Consensus 132 ~gl~~~f~--~~~~~~~~~~~~~kp~~~~~~~~l~~~~~~~~~~~~~~~igD~~~Di~~a~~~G~~~i~v~~~~~ 204 (237)
.+|..+|. .|+++- . .+ +...|+++.+++| -+...-++|||+...-.+|+..+|+++-|.....
T Consensus 196 y~L~~~f~ieNIYSa~--k--vG--K~~cFe~I~~Rfg---~p~~~f~~IGDG~eEe~aAk~l~wPFw~I~~h~D 261 (274)
T TIGR01658 196 FRLDTIFRIENVYSSI--K--VG--KLQCFKWIKERFG---HPKVRFCAIGDGWEECTAAQAMNWPFVKIDLHPD 261 (274)
T ss_pred hccCCccccccccchh--h--cc--hHHHHHHHHHHhC---CCCceEEEeCCChhHHHHHHhcCCCeEEeecCCC
Confidence 45666553 455444 2 23 4789999999999 7778899999999999999999999999977544
|
This domain is common to all eyes absent (EYA) homologs. Metazoan EYA's also contain a variable N-terminal domain consisting largely of low-complexity sequences. |
| >COG5610 Predicted hydrolase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.54 E-value=0.00031 Score=56.97 Aligned_cols=100 Identities=14% Similarity=0.041 Sum_probs=77.9
Q ss_pred CCccHHHHHHHHHhCCCCEEEEeCChhh-HHHHHHhhhhhhhhhcceeeeCCCCCccCCCCCHHHHHHHHHHcCCCCCCC
Q 026543 95 LMPGASHLIRHLHAKGIPMCVATGSLAR-HFELKTQKHRELFSLMHHVVRGDDPEVKQGKPSPDIFLAAAKRFEGGPIDS 173 (237)
Q Consensus 95 ~~~~~~~~l~~l~~~g~~v~i~s~~~~~-~~~~~~~~~~gl~~~f~~~~~~~~~~~~~~kp~~~~~~~~l~~~~~~~~~~ 173 (237)
+.....++.+.+.+++.+|.++|+-.-+ .+...++-..|.+..--.++.+. +....|-+...|..+++.-+ ++|
T Consensus 100 pn~~~~eL~e~ai~n~krVIlISDMYlps~Il~~~L~s~g~d~~nipiY~S~--e~rl~KnSg~LFk~Vlk~En---Vd~ 174 (635)
T COG5610 100 PNKKNIELVEEAIKNEKRVILISDMYLPSSILRTFLNSFGPDFNNIPIYMSS--EFRLKKNSGNLFKAVLKLEN---VDP 174 (635)
T ss_pred ccccchHHHHHHHhCCCeEEEEecccCcHHHHHHHHHhcCCCccCceeeecc--eeehhcccchHHHHHHhhcC---CCh
Confidence 3445568899999999999999985432 23444555555544444566666 67778888899999999999 999
Q ss_pred CcEEEEecCH-HHHHHHHHcCCeEEEE
Q 026543 174 QEILVFEDAP-SGVLAAKNAGMSVVMV 199 (237)
Q Consensus 174 ~~~~~igD~~-~Di~~a~~~G~~~i~v 199 (237)
..++++||.. .|..++++.|+.|...
T Consensus 175 ~~w~H~GDN~~aD~l~pk~LgI~Tlf~ 201 (635)
T COG5610 175 KKWIHCGDNWVADYLKPKNLGISTLFY 201 (635)
T ss_pred hheEEecCchhhhhcCccccchhHHHH
Confidence 9999999998 9999999999877654
|
|
| >TIGR02245 HAD_IIID1 HAD-superfamily subfamily IIID hydrolase, TIGR02245 | Back alignment and domain information |
|---|
Probab=97.48 E-value=0.0012 Score=48.54 Aligned_cols=95 Identities=9% Similarity=0.097 Sum_probs=55.5
Q ss_pred CCCCccHHHHHHHHHhCCCCEEEEeCChhhHHHHHHhhhhhhhhh--cceeeeCCCC--------Ccc--CCCCCHHHHH
Q 026543 93 SELMPGASHLIRHLHAKGIPMCVATGSLARHFELKTQKHRELFSL--MHHVVRGDDP--------EVK--QGKPSPDIFL 160 (237)
Q Consensus 93 ~~~~~~~~~~l~~l~~~g~~v~i~s~~~~~~~~~~~~~~~gl~~~--f~~~~~~~~~--------~~~--~~kp~~~~~~ 160 (237)
....|++.+||+.+.+. +.++|.|.+...++. ..++.+++... +...+.-+.. ..+ .-|+ +.
T Consensus 44 ~~kRP~l~eFL~~~~~~-feIvVwTAa~~~ya~-~~l~~l~~~~~~~~~i~~~ld~~~~~~~~~~~~g~~~vKd----L~ 117 (195)
T TIGR02245 44 ELMRPYLHEFLTSAYED-YDIVIWSATSMKWIE-IKMTELGVLTNPNYKITFLLDSTAMITVHTPRRGKFDVKP----LG 117 (195)
T ss_pred EEeCCCHHHHHHHHHhC-CEEEEEecCCHHHHH-HHHHHhcccCCccceEEEEeccccceeeEeeccCcEEEee----cH
Confidence 45789999999999996 999999997776655 45555543211 1111100100 011 1222 22
Q ss_pred HHHHHcCCCCCCCCcEEEEecCHHHHHHHHHcCC
Q 026543 161 AAAKRFEGGPIDSQEILVFEDAPSGVLAAKNAGM 194 (237)
Q Consensus 161 ~~l~~~~~~~~~~~~~~~igD~~~Di~~a~~~G~ 194 (237)
.+-++++. ..+.+++++|+|++....+=-..|+
T Consensus 118 ~lw~~l~~-~~~~~ntiiVDd~p~~~~~~P~N~i 150 (195)
T TIGR02245 118 VIWALLPE-FYSMKNTIMFDDLRRNFLMNPQNGL 150 (195)
T ss_pred Hhhhhccc-CCCcccEEEEeCCHHHHhcCCCCcc
Confidence 23334540 0377999999999976655444563
|
This family of sequences appears to belong to the Haloacid Dehalogenase (HAD) superfamily of enzymes by virtue of the presence of three catalytic domains, in this case: LLVLD(ILV)D(YH)T, I(VMG)IWS, and (DN)(VC)K(PA)Lx{15-17}T(IL)(MH)(FV)DD(IL)(GRS)(RK)N. Since this family has no large "cap" domain between motifs 1 and 2 or between 2 and 3, it is formally a "class III" HAD. |
| >COG0647 NagD Predicted sugar phosphatases of the HAD superfamily [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.47 E-value=0.00093 Score=51.55 Aligned_cols=87 Identities=17% Similarity=0.231 Sum_probs=54.8
Q ss_pred CCCCccHHHHHHHHHhCCCCEEEEeCChhhH---HHHHHhhhhhhhhhcceeeeCCCCCccCCCCCHHHHHHHHHHcCCC
Q 026543 93 SELMPGASHLIRHLHAKGIPMCVATGSLARH---FELKTQKHRELFSLMHHVVRGDDPEVKQGKPSPDIFLAAAKRFEGG 169 (237)
Q Consensus 93 ~~~~~~~~~~l~~l~~~g~~v~i~s~~~~~~---~~~~~~~~~gl~~~f~~~~~~~~~~~~~~kp~~~~~~~~l~~~~~~ 169 (237)
..++||+.++|+.|+++|.+++++||++... ...++...++++...+.++++. ......+++..
T Consensus 23 ~~~ipga~e~l~~L~~~g~~~iflTNn~~~s~~~~~~~L~~~~~~~~~~~~i~TS~-----------~at~~~l~~~~-- 89 (269)
T COG0647 23 NEAIPGAAEALKRLKAAGKPVIFLTNNSTRSREVVAARLSSLGGVDVTPDDIVTSG-----------DATADYLAKQK-- 89 (269)
T ss_pred CccCchHHHHHHHHHHcCCeEEEEeCCCCCCHHHHHHHHHhhcCCCCCHHHeecHH-----------HHHHHHHHhhC--
Confidence 4589999999999999999999999986543 3334444355656667776554 22333333332
Q ss_pred CCCCCcEEEEecCHHHHHHHHHcCCe
Q 026543 170 PIDSQEILVFEDAPSGVLAAKNAGMS 195 (237)
Q Consensus 170 ~~~~~~~~~igD~~~Di~~a~~~G~~ 195 (237)
++..|++|| ...+.+....+|+.
T Consensus 90 --~~~kv~viG-~~~l~~~l~~~G~~ 112 (269)
T COG0647 90 --PGKKVYVIG-EEGLKEELEGAGFE 112 (269)
T ss_pred --CCCEEEEEC-CcchHHHHHhCCcE
Confidence 235666666 33444555555643
|
|
| >PLN03190 aminophospholipid translocase; Provisional | Back alignment and domain information |
|---|
Probab=97.43 E-value=0.00017 Score=66.69 Aligned_cols=52 Identities=15% Similarity=0.063 Sum_probs=36.2
Q ss_pred CCcEEEEecCHHHHHHHHHcCCeEEEEcCCCCCcccccchhhhhhhhcccCCCC
Q 026543 173 SQEILVFEDAPSGVLAAKNAGMSVVMVPDPRLDSSYHSNADQLLSSLLGFNPKD 226 (237)
Q Consensus 173 ~~~~~~igD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~~~~el~~~l 226 (237)
..-+++|||+.||+.|.+.|.+.. ++....+. .....+|+.+..|..|...|
T Consensus 871 ~~vtlaIGDGaNDv~mIq~AdVGI-GIsG~EG~-qA~~aSDfaI~~Fr~L~rLL 922 (1178)
T PLN03190 871 SDMTLAIGDGANDVSMIQMADVGV-GISGQEGR-QAVMASDFAMGQFRFLVPLL 922 (1178)
T ss_pred CcEEEEECCCcchHHHHHhcCeee-eecCchhH-HHHHhhccchhhhHHHHHHH
Confidence 356899999999999999998443 44332221 23557888888888765443
|
|
| >KOG2470 consensus Similar to IMP-GMP specific 5'-nucleotidase [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.40 E-value=0.00048 Score=54.02 Aligned_cols=106 Identities=16% Similarity=0.161 Sum_probs=70.7
Q ss_pred CCCCccHHHHHHHHHhCCCCEEEEeCChhhHHHHHHhhh--hhhhhhcceeeeCCC-CCc--cCCCCCH-----------
Q 026543 93 SELMPGASHLIRHLHAKGIPMCVATGSLARHFELKTQKH--RELFSLMHHVVRGDD-PEV--KQGKPSP----------- 156 (237)
Q Consensus 93 ~~~~~~~~~~l~~l~~~g~~v~i~s~~~~~~~~~~~~~~--~gl~~~f~~~~~~~~-~~~--~~~kp~~----------- 156 (237)
+.-.|....+++.|+++|.++.++||++...+...+.-. -.+.+.||.|+...+ +.. ...+|-.
T Consensus 239 i~r~~ql~~fl~kL~~~GKklFLiTNSPysFVd~GM~flvG~~WRdlFDVVIvqA~KP~Fftde~rPfR~~dek~~sl~w 318 (510)
T KOG2470|consen 239 IERNPQLLAFLRKLKDHGKKLFLITNSPYSFVDKGMRFLVGDDWRDLFDVVIVQANKPEFFTDERRPFRKYDEKRGSLLW 318 (510)
T ss_pred hhccHHHHHHHHHHHHhcCcEEEEeCCchhhhhcCceeeeCccHHhhhheeEEecCCCcccccccCcchhhcccccchhh
Confidence 456678889999999999999999997776554322111 236788998875320 000 0111111
Q ss_pred --------------HHHHHHHHHcCCCCCCCCcEEEEecCH-HHHHHHH-HcCCeEEEEcC
Q 026543 157 --------------DIFLAAAKRFEGGPIDSQEILVFEDAP-SGVLAAK-NAGMSVVMVPD 201 (237)
Q Consensus 157 --------------~~~~~~l~~~~~~~~~~~~~~~igD~~-~Di~~a~-~~G~~~i~v~~ 201 (237)
..+...++--+ ....+++++||.. +|+.... ..||.+-.+-.
T Consensus 319 dkv~klekgkiYy~G~l~~flelt~---WrG~~VlYFGDHlySDLad~tlkhgWRTgAII~ 376 (510)
T KOG2470|consen 319 DKVDKLEKGKIYYQGNLKSFLELTG---WRGPRVLYFGDHLYSDLADLTLKHGWRTGAIIP 376 (510)
T ss_pred hhhhhcccCceeeeccHHHHHHHhc---cCCCeeEEecCcchhhhhhhHhhcccccccchH
Confidence 01233455556 8899999999999 9998877 88998776643
|
|
| >TIGR01494 ATPase_P-type ATPase, P-type (transporting), HAD superfamily, subfamily IC | Back alignment and domain information |
|---|
Probab=97.29 E-value=0.0015 Score=55.56 Aligned_cols=83 Identities=18% Similarity=0.181 Sum_probs=62.8
Q ss_pred CCCCccHHHHHHHHHhCCCCEEEEeCChhhHHHHHHhhhhhhhhhcceeeeCCCCCccCCCCCHHHHHHHHHHcCCCCCC
Q 026543 93 SELMPGASHLIRHLHAKGIPMCVATGSLARHFELKTQKHRELFSLMHHVVRGDDPEVKQGKPSPDIFLAAAKRFEGGPID 172 (237)
Q Consensus 93 ~~~~~~~~~~l~~l~~~g~~v~i~s~~~~~~~~~~~~~~~gl~~~f~~~~~~~~~~~~~~kp~~~~~~~~l~~~~~~~~~ 172 (237)
.++.+++.+.++.|++.|++++++|+... .....+.+.+|+ + +. -.|+....+.+++. -.
T Consensus 346 d~lr~~~~~~i~~l~~~gi~~~~ltGD~~-~~a~~ia~~lgi-------~-~~--------~~p~~K~~~v~~l~---~~ 405 (499)
T TIGR01494 346 DPLRDDAKETISELREAGIRVIMLTGDNV-LTAKAIAKELGI-------F-AR--------VTPEEKAALVEALQ---KK 405 (499)
T ss_pred CCCchhHHHHHHHHHHCCCeEEEEcCCCH-HHHHHHHHHcCc-------e-ec--------cCHHHHHHHHHHHH---HC
Confidence 57899999999999999999999998444 445456666664 1 11 23555556666665 45
Q ss_pred CCcEEEEecCHHHHHHHHHcCCe
Q 026543 173 SQEILVFEDAPSGVLAAKNAGMS 195 (237)
Q Consensus 173 ~~~~~~igD~~~Di~~a~~~G~~ 195 (237)
...+.|+||+.||..+.+.+++.
T Consensus 406 g~~v~~vGDg~nD~~al~~Advg 428 (499)
T TIGR01494 406 GRVVAMTGDGVNDAPALKKADVG 428 (499)
T ss_pred CCEEEEECCChhhHHHHHhCCCc
Confidence 57899999999999999999854
|
The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily. |
| >PLN02499 glycerol-3-phosphate acyltransferase | Back alignment and domain information |
|---|
Probab=97.16 E-value=0.0094 Score=49.73 Aligned_cols=174 Identities=10% Similarity=0.042 Sum_probs=84.5
Q ss_pred CccEEEEecCcccccchhhHHHHHHHHHHHcCCC-------CCHHH-HHHhcCCChHHHHHHHHHHhCCCCCCCHHHHHH
Q 026543 9 PITHVIFDMDGLLLDTEKFYTEVQELILARYNKT-------FDWSL-KAKMMGKKAIEAAQVFVEETGISDKLSAEDFLV 80 (237)
Q Consensus 9 ~~~~vifD~DGTL~~~~~~~~~~~~~~~~~~g~~-------~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (237)
..+.++||+||||+.+...+...+.-+++.-|.. ..+.. .....+... ...+.+....=.. ...+++..
T Consensus 7 ~~~~~~fD~DGTLlrs~ssFpyFmlva~eagG~~R~~~LL~l~P~l~ll~~~~~~~-~~lK~mi~v~f~G--l~~~die~ 83 (498)
T PLN02499 7 TSYSVVSELEGTLLKDADPFSYFMLVAFEASGLIRFALLLFLWPIIRLLDMLGMGD-AALKLMIFVATAG--VHESEIES 83 (498)
T ss_pred ccceEEEecccceecCCCccHHHHHHHHHhccHHHHHHHHHHhHHHHHHHhcCCch-HHHHHHHHHHhCC--CCHHHHHH
Confidence 3578999999999986665544444333333321 01111 111112122 2222232221111 44566655
Q ss_pred HHHHHHHhhcCCCCCCccHHHHHHHHHhCCCCEEEEeCChhhHHHHHHhhh-hhhhhhcc--------eeeeCCCCCccC
Q 026543 81 QREETLQTLFPTSELMPGASHLIRHLHAKGIPMCVATGSLARHFELKTQKH-RELFSLMH--------HVVRGDDPEVKQ 151 (237)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~v~i~s~~~~~~~~~~~~~~-~gl~~~f~--------~~~~~~~~~~~~ 151 (237)
..+....+.+.+. +.+. .++..++.| +++++|....- +.+.+++. +|.+.... +.++|. - .
T Consensus 84 vaRavlpkf~~~d-v~~e---~~~~~~~~g-~~vVVTAsPrv-mVEpFake~LG~D~VvGTEL~v~~~G~~TG~--~--~ 153 (498)
T PLN02499 84 VARAVLPKFYMDD-VDME---AWKVFSSCD-KRVVVTRMPRV-MVERFAKEHLRADEVIGSELVVNRFGFATGF--I--R 153 (498)
T ss_pred HHHHHhhHHHHhh-CCHH---HHHHHHcCC-eEEEEeCCHHH-HHHHHHHHhcCCceEEeeeEEEeeccEEEEE--E--e
Confidence 5555544433221 2222 556667777 89999985554 44467775 66533211 122221 1 1
Q ss_pred CCCCHHH-HHHHHHHcCCCCCCCCcEEEEecCHHHHHHHHHcCCeEEEEcC
Q 026543 152 GKPSPDI-FLAAAKRFEGGPIDSQEILVFEDAPSGVLAAKNAGMSVVMVPD 201 (237)
Q Consensus 152 ~kp~~~~-~~~~l~~~~~~~~~~~~~~~igD~~~Di~~a~~~G~~~i~v~~ 201 (237)
++...+. ...+.+.++ +....+-+||+..|-.-..-+ +.++|.+
T Consensus 154 G~n~~ek~~~rl~~~~g----~~~~~vg~~~~~~~~~f~~~c--k~~~~~~ 198 (498)
T PLN02499 154 GTDVDQSVANRVANLFV----DERPQLGLGRISASSSFLSLC--KEQIHPP 198 (498)
T ss_pred cCccHHHHHHHHHHHhC----ccCceecccCCcccchhhhhC--ceEEecC
Confidence 1222333 344445566 234578888888666655553 4555544
|
|
| >TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family | Back alignment and domain information |
|---|
Probab=97.15 E-value=0.0027 Score=49.73 Aligned_cols=88 Identities=13% Similarity=0.111 Sum_probs=57.0
Q ss_pred CCccHHHHHHHHHhCCCCEEEEeCChhhHHHH--HHhhhhhhhhhcceeeeCCCCCccCCCCCHHHHHHHHHHcCCCCCC
Q 026543 95 LMPGASHLIRHLHAKGIPMCVATGSLARHFEL--KTQKHRELFSLMHHVVRGDDPEVKQGKPSPDIFLAAAKRFEGGPID 172 (237)
Q Consensus 95 ~~~~~~~~l~~l~~~g~~v~i~s~~~~~~~~~--~~~~~~gl~~~f~~~~~~~~~~~~~~kp~~~~~~~~l~~~~~~~~~ 172 (237)
++||+.++|+.|+++|++++++||+....... ..++.+|+....+.++++. ......+++.. ..
T Consensus 19 ~~~ga~e~l~~L~~~g~~~~~~Tnns~~~~~~~~~~l~~~G~~~~~~~i~ts~-----------~~~~~~l~~~~---~~ 84 (279)
T TIGR01452 19 VVPGAPELLDRLARAGKAALFVTNNSTKSRAEYALKFARLGFNGLAEQLFSSA-----------LCAARLLRQPP---DA 84 (279)
T ss_pred eCcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCCChhhEecHH-----------HHHHHHHHhhC---cC
Confidence 77889999999999999999999965332221 2245566644444444332 34555666654 45
Q ss_pred CCcEEEEecCHHHHHHHHHcCCeEE
Q 026543 173 SQEILVFEDAPSGVLAAKNAGMSVV 197 (237)
Q Consensus 173 ~~~~~~igD~~~Di~~a~~~G~~~i 197 (237)
..+++++|+.. -.+.++..|+..+
T Consensus 85 ~~~v~~iG~~~-~~~~l~~~g~~~~ 108 (279)
T TIGR01452 85 PKAVYVIGEEG-LRAELDAAGIRLA 108 (279)
T ss_pred CCEEEEEcCHH-HHHHHHHCCCEEe
Confidence 57799999753 3445567787643
|
This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association. |
| >COG4030 Uncharacterized protein conserved in archaea [Function unknown] | Back alignment and domain information |
|---|
Probab=96.97 E-value=0.065 Score=39.94 Aligned_cols=40 Identities=20% Similarity=0.266 Sum_probs=28.4
Q ss_pred CCCCccHHHHHHHHHhCCCCEEEEeCChhhHHHHHHhhhhhh
Q 026543 93 SELMPGASHLIRHLHAKGIPMCVATGSLARHFELKTQKHREL 134 (237)
Q Consensus 93 ~~~~~~~~~~l~~l~~~g~~v~i~s~~~~~~~~~~~~~~~gl 134 (237)
.++.||+.+.++.+.+. ..-+|+|.+...+ ..++.+..|+
T Consensus 82 a~lvPgA~etm~~l~~~-~tp~v~STSY~qy-~~r~a~~ig~ 121 (315)
T COG4030 82 AKLVPGAEETMATLQER-WTPVVISTSYTQY-LRRTASMIGV 121 (315)
T ss_pred cccCCChHHHHHHHhcc-CCceEEeccHHHH-HHHHHHhcCC
Confidence 67999999999999887 5666777645444 4455666554
|
|
| >COG3769 Predicted hydrolase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=96.92 E-value=0.013 Score=43.39 Aligned_cols=21 Identities=14% Similarity=0.156 Sum_probs=17.2
Q ss_pred cEEEEecCHHHHHHHHHcCCe
Q 026543 175 EILVFEDAPSGVLAAKNAGMS 195 (237)
Q Consensus 175 ~~~~igD~~~Di~~a~~~G~~ 195 (237)
-++.+||++||+.+..-....
T Consensus 211 ~t~~~GDg~nD~Pl~ev~d~A 231 (274)
T COG3769 211 TTLGLGDGPNDAPLLEVMDYA 231 (274)
T ss_pred EEEecCCCCCcccHHHhhhhh
Confidence 489999999999988766543
|
|
| >KOG2961 consensus Predicted hydrolase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=96.89 E-value=0.0075 Score=41.72 Aligned_cols=34 Identities=18% Similarity=0.154 Sum_probs=31.2
Q ss_pred CCCCcEEEEecCH-HHHHHHHHcCCeEEEEcCCCC
Q 026543 171 IDSQEILVFEDAP-SGVLAAKNAGMSVVMVPDPRL 204 (237)
Q Consensus 171 ~~~~~~~~igD~~-~Di~~a~~~G~~~i~v~~~~~ 204 (237)
..+++++||||++ .||-+|...|.-++|...|..
T Consensus 137 ~~~se~~~vGDRlfTDI~~aN~mGs~gVw~~~gv~ 171 (190)
T KOG2961|consen 137 CTSSELIMVGDRLFTDIVYANRMGSLGVWTEPGVR 171 (190)
T ss_pred CChhHeEEEccchhhhHhhhhhccceeEEeccccc
Confidence 5789999999999 999999999999999988765
|
|
| >KOG1618 consensus Predicted phosphatase [General function prediction only] | Back alignment and domain information |
|---|
Probab=96.88 E-value=0.0047 Score=48.08 Aligned_cols=54 Identities=28% Similarity=0.346 Sum_probs=39.3
Q ss_pred cCCCCCHHHHHHHH-------HHcCCCCCCCCcEEEEecCH-HHHHHHH---------------HcCCeEEEEcCCCC
Q 026543 150 KQGKPSPDIFLAAA-------KRFEGGPIDSQEILVFEDAP-SGVLAAK---------------NAGMSVVMVPDPRL 204 (237)
Q Consensus 150 ~~~kp~~~~~~~~l-------~~~~~~~~~~~~~~~igD~~-~Di~~a~---------------~~G~~~i~v~~~~~ 204 (237)
..+||.+-.|..+- +..+ ..-+++...+|||.+ .|+..|. +-||..|.|.+|-.
T Consensus 268 t~GKPt~ltY~~A~~vl~~~ak~~~-~~~~~k~lymvGDNP~sDv~GA~lf~~yap~~~~g~~~~~~w~SILV~TGV~ 344 (389)
T KOG1618|consen 268 TLGKPTKLTYDYAEDVLRRQAKRRG-GAAPIKKLYMVGDNPMSDVRGANLFHQYAPELGAGGSANYGWISILVRTGVY 344 (389)
T ss_pred ccCCCceehHHhHHHHHHHHHHhhc-ccCCcceeeeecCCCcccccccccccccccccccccccCCCceEEEEeeeee
Confidence 46788887666532 1222 125678899999999 9999996 66888999987655
|
|
| >KOG3128 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=96.86 E-value=0.0082 Score=45.20 Aligned_cols=129 Identities=15% Similarity=0.127 Sum_probs=75.7
Q ss_pred hHHHHHHHHHHhCCCC------CCCHHHHHHHHHHHHHhhcCCCCCCccHHHHHHHHHhCCCCEEEEeCChhhHHHHHHh
Q 026543 56 AIEAAQVFVEETGISD------KLSAEDFLVQREETLQTLFPTSELMPGASHLIRHLHAKGIPMCVATGSLARHFELKTQ 129 (237)
Q Consensus 56 ~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~v~i~s~~~~~~~~~~~~ 129 (237)
..+....+.++++.+. +.+...+.+...+. .+.+..|+.+++..|.++++++.|+|.+-...+..-+.
T Consensus 100 ieEKvp~MeeWW~kSH~Lliq~~f~k~~I~~~Va~s------~i~lReg~~~ff~~L~~~~IP~~iFSAGigdiiEev~~ 173 (298)
T KOG3128|consen 100 IEEKVPHMEEWWTKSHELLIQGGFSKNAIDDIVAES------NIALREGYEEFFEALQAHEIPLLIFSAGIGDIIEEVTR 173 (298)
T ss_pred hhhhchHHHHHHhcccceeecCCcCHHHHHHHHHHh------hHHHHHHHHHHHHHHHhCCCceEEEecchHHHHHHHHH
Confidence 3444555556655432 23444444444332 25578899999999999999999999988877766555
Q ss_pred hhhhhhhhcceeeeCC-----CC-CccCCC-------CCHHHHHHHHHHcCCCCCCCCcEEEEecCHHHHHHHHHc
Q 026543 130 KHRELFSLMHHVVRGD-----DP-EVKQGK-------PSPDIFLAAAKRFEGGPIDSQEILVFEDAPSGVLAAKNA 192 (237)
Q Consensus 130 ~~~gl~~~f~~~~~~~-----~~-~~~~~k-------p~~~~~~~~l~~~~~~~~~~~~~~~igD~~~Di~~a~~~ 192 (237)
+..++.. +..+++-. +. -.+..+ .+...++...+.+.. .-...++++.|||..|+.||.-+
T Consensus 174 q~~~~~p-n~k~vSN~~~F~edg~l~gF~~~Lihtfnkn~~v~~~~s~yf~~-~~~~~nVillGdsigdl~ma~gv 247 (298)
T KOG3128|consen 174 QKLVLHP-NVKFVSNYMDFDEDGNLCGFSQPLIHTFNKNSSVLQNESEYFHQ-LAGRVNVILLGDSIGDLHMADGV 247 (298)
T ss_pred HHhccCc-cHHhhhhhhhhcccchhhhhhHHHHHHHccchHHHHhhhHHHhh-ccCCceEEEeccccccchhhcCC
Confidence 5555433 22222110 00 001111 122334444444441 13567899999999999998765
|
|
| >COG2216 KdpB High-affinity K+ transport system, ATPase chain B [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=96.79 E-value=0.0028 Score=52.56 Aligned_cols=92 Identities=16% Similarity=0.139 Sum_probs=68.4
Q ss_pred CCCCccHHHHHHHHHhCCCCEEEEeCChhhHHHHHHhhhhhhhhhcceeeeCCCCCccCCCCCHHHHHHHHHHcCCCCCC
Q 026543 93 SELMPGASHLIRHLHAKGIPMCVATGSLARHFELKTQKHRELFSLMHHVVRGDDPEVKQGKPSPDIFLAAAKRFEGGPID 172 (237)
Q Consensus 93 ~~~~~~~~~~l~~l~~~g~~v~i~s~~~~~~~~~~~~~~~gl~~~f~~~~~~~~~~~~~~kp~~~~~~~~l~~~~~~~~~ 172 (237)
...-||+++-+.+|++-|++.+.+|+ +.+.....+.+..|++++... .+|+-...+.++.+ ..
T Consensus 446 DivK~Gi~ERf~elR~MgIkTvM~TG-DN~~TAa~IA~EAGVDdfiAe-------------atPEdK~~~I~~eQ---~~ 508 (681)
T COG2216 446 DIVKPGIKERFAELRKMGIKTVMITG-DNPLTAAAIAAEAGVDDFIAE-------------ATPEDKLALIRQEQ---AE 508 (681)
T ss_pred hhcchhHHHHHHHHHhcCCeEEEEeC-CCHHHHHHHHHHhCchhhhhc-------------CChHHHHHHHHHHH---hc
Confidence 35688999999999999999999998 554555566666676553221 13555667777777 67
Q ss_pred CCcEEEEecCHHHHHHHHHcCCeEEEEcCCCC
Q 026543 173 SQEILVFEDAPSGVLAAKNAGMSVVMVPDPRL 204 (237)
Q Consensus 173 ~~~~~~igD~~~Di~~a~~~G~~~i~v~~~~~ 204 (237)
.+=+-|.||+.||..+..++. +++.+...
T Consensus 509 grlVAMtGDGTNDAPALAqAd---Vg~AMNsG 537 (681)
T COG2216 509 GRLVAMTGDGTNDAPALAQAD---VGVAMNSG 537 (681)
T ss_pred CcEEEEcCCCCCcchhhhhcc---hhhhhccc
Confidence 778899999999999999998 44554433
|
|
| >PF05822 UMPH-1: Pyrimidine 5'-nucleotidase (UMPH-1); InterPro: IPR006434 This family is a small group of metazoan sequences with sequences from Arabidopsis thaliana (Mouse-ear cress) and rice | Back alignment and domain information |
|---|
Probab=96.76 E-value=0.015 Score=44.15 Aligned_cols=96 Identities=16% Similarity=0.208 Sum_probs=51.2
Q ss_pred CCCCCccHHHHHHHHHhCCCCEEEEeCChhhHHHHHHhhhhhhhhhcceeee------------CCCCCccCCCC-CHHH
Q 026543 92 TSELMPGASHLIRHLHAKGIPMCVATGSLARHFELKTQKHRELFSLMHHVVR------------GDDPEVKQGKP-SPDI 158 (237)
Q Consensus 92 ~~~~~~~~~~~l~~l~~~g~~v~i~s~~~~~~~~~~~~~~~gl~~~f~~~~~------------~~~~~~~~~kp-~~~~ 158 (237)
.+.+++|+.++++.|.++++++.|+|+|-.+.+...+.+. +....-=.|++ +-.....+.-- +...
T Consensus 88 ~i~LRdg~~~~f~~L~~~~IP~lIFSAGlgdvI~~vL~q~-~~~~~Nv~VvSN~M~Fd~~g~l~gF~~~lIH~~NKn~~~ 166 (246)
T PF05822_consen 88 DIMLRDGVEEFFDKLEEHNIPLLIFSAGLGDVIEEVLRQA-GVFHPNVKVVSNFMDFDEDGVLVGFKGPLIHTFNKNESA 166 (246)
T ss_dssp ---B-BTHHHHHHHHHCTT--EEEEEEEEHHHHHHHHHHT-T--BTTEEEEEE-EEE-TTSBEEEE-SS---TT-HHHHH
T ss_pred chhhhcCHHHHHHHHHhcCCCEEEEeCCcHHHHHHHHHHc-CCCCCCeEEEeeeEEECCcceEeecCCCceEEeeCCccc
Confidence 4789999999999999999999999998887766554443 33211111221 11001111110 1112
Q ss_pred H--HHHHHHcCCCCCCCCcEEEEecCHHHHHHHHHc
Q 026543 159 F--LAAAKRFEGGPIDSQEILVFEDAPSGVLAAKNA 192 (237)
Q Consensus 159 ~--~~~l~~~~~~~~~~~~~~~igD~~~Di~~a~~~ 192 (237)
+ ....+++. ...+++.+|||..|+.|+..+
T Consensus 167 l~~~~~~~~~~----~R~NvlLlGDslgD~~Ma~G~ 198 (246)
T PF05822_consen 167 LEDSPYFKQLK----KRTNVLLLGDSLGDLHMADGV 198 (246)
T ss_dssp HTTHHHHHCTT----T--EEEEEESSSGGGGTTTT-
T ss_pred ccCchHHHHhc----cCCcEEEecCccCChHhhcCC
Confidence 2 11223343 578999999999999998766
|
The sequences represent pyrimidine 5-nucleotidases, apparently in reference to HSPC233, the Homo sapiens (Human) homologue []. The structure of mouse sequence has been reported []. This group of sequences was originally found during searches for members of the haloacid dehalogenase (HAD) superfamily (IPR005834 from INTERPRO). All of the conserved catalytic motifs [] are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches of that subfamily (IA-ID) as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.; GO: 0000287 magnesium ion binding, 0008253 5'-nucleotidase activity, 0005737 cytoplasm; PDB: 2BDU_B 2G07_A 2G06_A 2G0A_A 2Q4T_A 2G09_A 2G08_A 2VKQ_A 2CN1_A 2JGA_A. |
| >PF06189 5-nucleotidase: 5'-nucleotidase; InterPro: IPR010394 This family consists of both eukaryotic and prokaryotic 5'-nucleotidase sequences (3 | Back alignment and domain information |
|---|
Probab=96.75 E-value=0.014 Score=44.31 Aligned_cols=76 Identities=17% Similarity=0.107 Sum_probs=48.6
Q ss_pred CCCEEEEeCChhhHHHHHHhhhh-hhhhhcceeeeCCCCCccCCCCCHHHHHHHHHHcCCCCCCCCcEEEEecCHHHHHH
Q 026543 110 GIPMCVATGSLARHFELKTQKHR-ELFSLMHHVVRGDDPEVKQGKPSPDIFLAAAKRFEGGPIDSQEILVFEDAPSGVLA 188 (237)
Q Consensus 110 g~~v~i~s~~~~~~~~~~~~~~~-gl~~~f~~~~~~~~~~~~~~kp~~~~~~~~l~~~~~~~~~~~~~~~igD~~~Di~~ 188 (237)
.++++++|.++...-. +.++.+ .+.-.+|..+.-. +.+| ..+|+.++ --||++|....++.
T Consensus 186 piRtalVTAR~apah~-RvI~TLr~Wgv~vDEafFLg------G~~K----~~vL~~~~-------phIFFDDQ~~H~~~ 247 (264)
T PF06189_consen 186 PIRTALVTARSAPAHE-RVIRTLRSWGVRVDEAFFLG------GLPK----GPVLKAFR-------PHIFFDDQDGHLES 247 (264)
T ss_pred ceEEEEEEcCCCchhH-HHHHHHHHcCCcHhHHHHhC------CCch----hHHHHhhC-------CCEeecCchhhhhH
Confidence 4889999987665433 333321 2222344333222 1223 33677777 45999999999999
Q ss_pred HHHcCCeEEEEcCCCC
Q 026543 189 AKNAGMSVVMVPDPRL 204 (237)
Q Consensus 189 a~~~G~~~i~v~~~~~ 204 (237)
|. .++++..|+.|..
T Consensus 248 a~-~~vps~hVP~gv~ 262 (264)
T PF06189_consen 248 AS-KVVPSGHVPYGVA 262 (264)
T ss_pred hh-cCCCEEeccCCcC
Confidence 99 8889999987754
|
1.3.5 from EC).; GO: 0000166 nucleotide binding, 0000287 magnesium ion binding, 0008253 5'-nucleotidase activity, 0009117 nucleotide metabolic process, 0005737 cytoplasm |
| >KOG3107 consensus Predicted haloacid dehalogenase-like hydrolase (eyes absent) [General function prediction only] | Back alignment and domain information |
|---|
Probab=96.73 E-value=0.037 Score=44.22 Aligned_cols=45 Identities=20% Similarity=0.173 Sum_probs=38.3
Q ss_pred CHHHHHHHHHHcCCCCCCCCcEEEEecCHHHHHHHHHcCCeEEEEcCCC
Q 026543 155 SPDIFLAAAKRFEGGPIDSQEILVFEDAPSGVLAAKNAGMSVVMVPDPR 203 (237)
Q Consensus 155 ~~~~~~~~l~~~~~~~~~~~~~~~igD~~~Di~~a~~~G~~~i~v~~~~ 203 (237)
+...|+++.+++| ....-++|||+...-.+|++..|++.-+....
T Consensus 410 KescFerI~~RFg----~K~~yvvIgdG~eee~aAK~ln~PfwrI~~h~ 454 (468)
T KOG3107|consen 410 KESCFERIQSRFG----RKVVYVVIGDGVEEEQAAKALNMPFWRISSHS 454 (468)
T ss_pred HHHHHHHHHHHhC----CceEEEEecCcHHHHHHHHhhCCceEeeccCc
Confidence 3678999999999 46677889999999999999999998886543
|
|
| >KOG0204 consensus Calcium transporting ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=96.57 E-value=0.0031 Score=55.26 Aligned_cols=99 Identities=15% Similarity=0.220 Sum_probs=62.0
Q ss_pred CCCCccHHHHHHHHHhCCCCEEEEeCChhhHHHHHHhhhhhhhhhcc--eeeeCCCCCc------------------cCC
Q 026543 93 SELMPGASHLIRHLHAKGIPMCVATGSLARHFELKTQKHRELFSLMH--HVVRGDDPEV------------------KQG 152 (237)
Q Consensus 93 ~~~~~~~~~~l~~l~~~g~~v~i~s~~~~~~~~~~~~~~~gl~~~f~--~~~~~~~~~~------------------~~~ 152 (237)
.+.+||+++.++.|++.|+.|..+|+.+. .....+....|+...-+ ..+.|. +. ...
T Consensus 646 DPvRPgV~~AV~~Cq~AGItVRMVTGDNI-~TAkAIA~eCGILt~~~d~~~lEG~--eFr~~s~ee~~~i~pkl~VlARS 722 (1034)
T KOG0204|consen 646 DPVRPGVPEAVQLCQRAGITVRMVTGDNI-NTAKAIARECGILTPGGDFLALEGK--EFRELSQEERDKIWPKLRVLARS 722 (1034)
T ss_pred CCCCCCcHHHHHHHHHcCcEEEEEeCCcH-HHHHHHHHHcccccCCCccceecch--hhhhcCHHHHHhhhhhheeeecC
Confidence 57899999999999999999999998443 44445666666643322 112111 10 011
Q ss_pred CC-CHHHHHHHHHHcCCCCCCCCcEEEE-ecCHHHHHHHHHcCCeEEEEcCCCC
Q 026543 153 KP-SPDIFLAAAKRFEGGPIDSQEILVF-EDAPSGVLAAKNAGMSVVMVPDPRL 204 (237)
Q Consensus 153 kp-~~~~~~~~l~~~~~~~~~~~~~~~i-gD~~~Di~~a~~~G~~~i~v~~~~~ 204 (237)
-| +...+-+.+++.| ++++| ||+.||-.+.+.|. |++++|-.
T Consensus 723 SP~DK~lLVk~L~~~g-------~VVAVTGDGTNDaPALkeAD---VGlAMGIa 766 (1034)
T KOG0204|consen 723 SPNDKHLLVKGLIKQG-------EVVAVTGDGTNDAPALKEAD---VGLAMGIA 766 (1034)
T ss_pred CCchHHHHHHHHHhcC-------cEEEEecCCCCCchhhhhcc---cchhcccc
Confidence 11 1122223334444 66666 99999999999999 55555544
|
|
| >PF03031 NIF: NLI interacting factor-like phosphatase; InterPro: IPR004274 The function of this domain is unclear | Back alignment and domain information |
|---|
Probab=96.56 E-value=0.003 Score=44.97 Aligned_cols=96 Identities=16% Similarity=0.260 Sum_probs=59.1
Q ss_pred CCCCccHHHHHHHHHhCCCCEEEEeCChhhHHHHHHhhhhhh-hhhcceeeeCCCCCccCCCCCHHHHHHHHHHcCCCCC
Q 026543 93 SELMPGASHLIRHLHAKGIPMCVATGSLARHFELKTQKHREL-FSLMHHVVRGDDPEVKQGKPSPDIFLAAAKRFEGGPI 171 (237)
Q Consensus 93 ~~~~~~~~~~l~~l~~~g~~v~i~s~~~~~~~~~~~~~~~gl-~~~f~~~~~~~~~~~~~~kp~~~~~~~~l~~~~~~~~ 171 (237)
+...||+.++|+.+.+. +.++|.|.+...+.. .+++.+.- ..+|+.+++.+ .....+. .+.+-++.++ -
T Consensus 35 v~~RP~l~~FL~~l~~~-~ev~i~T~~~~~ya~-~v~~~ldp~~~~~~~~~~r~--~~~~~~~---~~~KdL~~l~---~ 104 (159)
T PF03031_consen 35 VKLRPGLDEFLEELSKH-YEVVIWTSASEEYAE-PVLDALDPNGKLFSRRLYRD--DCTFDKG---SYIKDLSKLG---R 104 (159)
T ss_dssp EEE-TTHHHHHHHHHHH-CEEEEE-SS-HHHHH-HHHHHHTTTTSSEEEEEEGG--GSEEETT---EEE--GGGSS---S
T ss_pred EeeCchHHHHHHHHHHh-ceEEEEEeehhhhhh-HHHHhhhhhccccccccccc--ccccccc---ccccchHHHh---h
Confidence 66899999999999776 999999998776655 45666554 45688888766 3221111 1125677777 7
Q ss_pred CCCcEEEEecCHHHHHHHHHcCCeEEEEcC
Q 026543 172 DSQEILVFEDAPSGVLAAKNAGMSVVMVPD 201 (237)
Q Consensus 172 ~~~~~~~igD~~~Di~~a~~~G~~~i~v~~ 201 (237)
+.+++++|+|++.-...-...+ +.|..
T Consensus 105 ~~~~vvivDD~~~~~~~~~~N~---i~v~~ 131 (159)
T PF03031_consen 105 DLDNVVIVDDSPRKWALQPDNG---IPVPP 131 (159)
T ss_dssp -GGGEEEEES-GGGGTTSGGGE---EE---
T ss_pred ccccEEEEeCCHHHeeccCCce---EEecc
Confidence 8999999999997544334444 55544
|
It is found in proteins of diverse function including phosphatases some of which may be active in active in ternary elongation complexes and a number of NLI interacting factors. In the phospatases this domain is often present N-terminal to the BRCT domain (IPR001357 from INTERPRO).; GO: 0005515 protein binding; PDB: 3L0Y_A 2GHQ_A 3PGL_A 3L0C_B 1TA0_A 2GHT_A 3L0B_B 1T9Z_A 3QLE_A 2Q5E_E .... |
| >KOG0206 consensus P-type ATPase [General function prediction only] | Back alignment and domain information |
|---|
Probab=96.42 E-value=0.056 Score=49.93 Aligned_cols=29 Identities=31% Similarity=0.437 Sum_probs=26.1
Q ss_pred CCCCCccHHHHHHHHHhCCCCEEEEeCCh
Q 026543 92 TSELMPGASHLIRHLHAKGIPMCVATGSL 120 (237)
Q Consensus 92 ~~~~~~~~~~~l~~l~~~g~~v~i~s~~~ 120 (237)
+.++.+|+.+.++.|+++|++++++|+..
T Consensus 649 EDkLQdgVPetI~~L~~AGIKIWVLTGDK 677 (1151)
T KOG0206|consen 649 EDKLQDGVPETIAKLAQAGIKIWVLTGDK 677 (1151)
T ss_pred echhccCchHHHHHHHHcCCEEEEEcCcH
Confidence 46789999999999999999999999833
|
|
| >KOG0210 consensus P-type ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=96.21 E-value=0.0055 Score=52.68 Aligned_cols=51 Identities=10% Similarity=0.068 Sum_probs=34.2
Q ss_pred CCcEEEEecCHHHHHHHHHcCCeEEEEcCCCCCcccccchhhhhhhhcccCCC
Q 026543 173 SQEILVFEDAPSGVLAAKNAGMSVVMVPDPRLDSSYHSNADQLLSSLLGFNPK 225 (237)
Q Consensus 173 ~~~~~~igD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~~~~el~~~ 225 (237)
.+++.+|||+-||+.|.+.|.+. |++....+.+ ..-.||+-+..|..+...
T Consensus 781 ~krvc~IGDGGNDVsMIq~A~~G-iGI~gkEGkQ-ASLAADfSItqF~Hv~rL 831 (1051)
T KOG0210|consen 781 GKRVCAIGDGGNDVSMIQAADVG-IGIVGKEGKQ-ASLAADFSITQFSHVSRL 831 (1051)
T ss_pred CceEEEEcCCCccchheeecccc-eeeecccccc-cchhccccHHHHHHHHHH
Confidence 47899999999999999988644 4444333322 234577777777665433
|
|
| >TIGR01457 HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydrolase, TIGR01457 | Back alignment and domain information |
|---|
Probab=96.12 E-value=0.05 Score=41.90 Aligned_cols=51 Identities=16% Similarity=0.280 Sum_probs=37.7
Q ss_pred CCCCccHHHHHHHHHhCCCCEEEEeCCh---hhHHHHHHhhhhhhhhhcceeeeC
Q 026543 93 SELMPGASHLIRHLHAKGIPMCVATGSL---ARHFELKTQKHRELFSLMHHVVRG 144 (237)
Q Consensus 93 ~~~~~~~~~~l~~l~~~g~~v~i~s~~~---~~~~~~~~~~~~gl~~~f~~~~~~ 144 (237)
..+.|++.++++.|+++|++++++||+. ..... ..++.+|+....+.++++
T Consensus 16 ~~~i~~a~~~l~~l~~~g~~~~~~Tnn~~r~~~~~~-~~l~~~g~~~~~~~iit~ 69 (249)
T TIGR01457 16 KERIPEAETFVHELQKRDIPYLFVTNNSTRTPESVA-EMLASFDIPATLETVFTA 69 (249)
T ss_pred CeeCcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHH-HHHHHcCCCCChhhEeeH
Confidence 3467899999999999999999999844 33333 345667777666677665
|
This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in this model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those. |
| >PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional | Back alignment and domain information |
|---|
Probab=96.01 E-value=0.0029 Score=56.39 Aligned_cols=66 Identities=12% Similarity=-0.061 Sum_probs=48.2
Q ss_pred CCCCCHHHHHHHHHHcCCCCCCCCcEEEEecCHHHHHHHHHcCCeEEEEcCCCCCcccccchhhhhhhhcccCCC
Q 026543 151 QGKPSPDIFLAAAKRFEGGPIDSQEILVFEDAPSGVLAAKNAGMSVVMVPDPRLDSSYHSNADQLLSSLLGFNPK 225 (237)
Q Consensus 151 ~~kp~~~~~~~~l~~~~~~~~~~~~~~~igD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~~~~el~~~ 225 (237)
.+..|..+..++++ + ++++.+++|||+.||..|.+.++.....|..|+. ...|++.+++.+|+...
T Consensus 654 ~~vnKG~al~~ll~--~---~~~d~vl~~GD~~nDe~Mf~~~~~~~~~v~vG~~----~s~A~~~l~~~~eV~~~ 719 (726)
T PRK14501 654 AGVNKGRAVRRLLE--A---GPYDFVLAIGDDTTDEDMFRALPETAITVKVGPG----ESRARYRLPSQREVREL 719 (726)
T ss_pred CCCCHHHHHHHHHh--c---CCCCEEEEECCCCChHHHHHhcccCceEEEECCC----CCcceEeCCCHHHHHHH
Confidence 34456888888888 6 7789999999999999999997533345555554 45667777776665443
|
|
| >COG3882 FkbH Predicted enzyme involved in methoxymalonyl-ACP biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=96.00 E-value=0.065 Score=44.41 Aligned_cols=92 Identities=15% Similarity=0.232 Sum_probs=71.3
Q ss_pred CCCccHHHHHHHHHhCCCCEEEEeCChhhHHHHHHhhhhhhhhhcceeeeCCC--CCccCCCCCHHHHHHHHHHcCCCCC
Q 026543 94 ELMPGASHLIRHLHAKGIPMCVATGSLARHFELKTQKHRELFSLMHHVVRGDD--PEVKQGKPSPDIFLAAAKRFEGGPI 171 (237)
Q Consensus 94 ~~~~~~~~~l~~l~~~g~~v~i~s~~~~~~~~~~~~~~~gl~~~f~~~~~~~~--~~~~~~kp~~~~~~~~l~~~~~~~~ 171 (237)
+++...++++..|+++|+-++|+|-+........+.++ -|+++--++ .......|+.+.++++++++| +
T Consensus 255 ~~fk~fQ~~Ik~l~kqGVlLav~SKN~~~da~evF~kh------p~MiLkeedfa~~~iNW~~K~eNirkIAkklN---l 325 (574)
T COG3882 255 EAFKTFQNFIKGLKKQGVLLAVCSKNTEKDAKEVFRKH------PDMILKEEDFAVFQINWDPKAENIRKIAKKLN---L 325 (574)
T ss_pred hhHHHHHHHHHHHHhccEEEEEecCCchhhHHHHHhhC------CCeEeeHhhhhhheecCCcchhhHHHHHHHhC---C
Confidence 45667889999999999999999986666555544332 355554331 012356789999999999999 9
Q ss_pred CCCcEEEEecCHHHHHHHHHcCC
Q 026543 172 DSQEILVFEDAPSGVLAAKNAGM 194 (237)
Q Consensus 172 ~~~~~~~igD~~~Di~~a~~~G~ 194 (237)
-.+..+|++|++...+-.+.-+-
T Consensus 326 g~dSmvFiDD~p~ErE~vk~~~~ 348 (574)
T COG3882 326 GLDSMVFIDDNPAERELVKRELP 348 (574)
T ss_pred CccceEEecCCHHHHHHHHhcCc
Confidence 99999999999999998888875
|
|
| >PRK10444 UMP phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=95.25 E-value=0.17 Score=38.95 Aligned_cols=50 Identities=14% Similarity=0.194 Sum_probs=35.2
Q ss_pred CCccHHHHHHHHHhCCCCEEEEeCChhhHHH--HHHhhhhhhhhhcceeeeC
Q 026543 95 LMPGASHLIRHLHAKGIPMCVATGSLARHFE--LKTQKHRELFSLMHHVVRG 144 (237)
Q Consensus 95 ~~~~~~~~l~~l~~~g~~v~i~s~~~~~~~~--~~~~~~~gl~~~f~~~~~~ 144 (237)
+.|++.++++.|+++|.+++++||+...... ...++.+|+.--.+.++++
T Consensus 18 ~~p~a~~~l~~L~~~g~~~~~~Tn~~~~~~~~~~~~l~~~G~~~~~~~i~ts 69 (248)
T PRK10444 18 AVPGAAEFLHRILDKGLPLVLLTNYPSQTGQDLANRFATAGVDVPDSVFYTS 69 (248)
T ss_pred eCccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCCCHhhEecH
Confidence 6899999999999999999999998764332 1224445664334555544
|
|
| >COG4502 5'(3')-deoxyribonucleotidase [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
Probab=95.20 E-value=0.015 Score=39.73 Aligned_cols=88 Identities=18% Similarity=0.267 Sum_probs=52.9
Q ss_pred cCCCCCCccHHHHHHHHHhCCCCEEEEeCC--hhhHHHHHH---hhhhhhhhhcceeeeCCCCCccCCCCCHHHHHHHHH
Q 026543 90 FPTSELMPGASHLIRHLHAKGIPMCVATGS--LARHFELKT---QKHRELFSLMHHVVRGDDPEVKQGKPSPDIFLAAAK 164 (237)
Q Consensus 90 ~~~~~~~~~~~~~l~~l~~~g~~v~i~s~~--~~~~~~~~~---~~~~gl~~~f~~~~~~~~~~~~~~kp~~~~~~~~l~ 164 (237)
++...+.|+++..++.|.+. +.|+|+|.. .......+. .+.+.+..+-..++|+. |
T Consensus 64 FRnL~V~p~aq~v~keLt~~-y~vYivtaamdhp~s~~dK~eWl~E~FPFi~~qn~vfCgn-------K----------- 124 (180)
T COG4502 64 FRNLGVQPFAQTVLKELTSI-YNVYIVTAAMDHPKSCEDKGEWLKEKFPFISYQNIVFCGN-------K----------- 124 (180)
T ss_pred hhhcCccccHHHHHHHHHhh-heEEEEEeccCCchhHHHHHHHHHHHCCCCChhhEEEecC-------C-----------
Confidence 34578999999999999998 999999986 222222221 12222233334566665 1
Q ss_pred HcCCCCCCCCcEEEEecCHHHHHHHHHcCCeEEEEcCCCC
Q 026543 165 RFEGGPIDSQEILVFEDAPSGVLAAKNAGMSVVMVPDPRL 204 (237)
Q Consensus 165 ~~~~~~~~~~~~~~igD~~~Di~~a~~~G~~~i~v~~~~~ 204 (237)
| + .+-=++|+|++-.++.+. |.+...-+..+.
T Consensus 125 --n---i-vkaDilIDDnp~nLE~F~--G~kIlFdA~HN~ 156 (180)
T COG4502 125 --N---I-VKADILIDDNPLNLENFK--GNKILFDAHHNK 156 (180)
T ss_pred --C---e-EEeeEEecCCchhhhhcc--CceEEEeccccc
Confidence 1 1 112278999999988776 555444333333
|
|
| >PLN02580 trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=95.06 E-value=0.012 Score=47.78 Aligned_cols=70 Identities=14% Similarity=-0.024 Sum_probs=49.2
Q ss_pred CCCCHHHHHHHHHHcCCCCCCCCc---EEEEecCHHHHHHHHHc-----CCeEEEEcCCCCCcccccchhhhhhhhcccC
Q 026543 152 GKPSPDIFLAAAKRFEGGPIDSQE---ILVFEDAPSGVLAAKNA-----GMSVVMVPDPRLDSSYHSNADQLLSSLLGFN 223 (237)
Q Consensus 152 ~kp~~~~~~~~l~~~~~~~~~~~~---~~~igD~~~Di~~a~~~-----G~~~i~v~~~~~~~~~~~~~~~~~~~~~el~ 223 (237)
+..|..++..++++++ ++..+ .++|||..||..|.+.+ |+. |.|..+.. ...|.+.+++..|+.
T Consensus 299 g~~KG~Av~~Ll~~~g---~~~~d~~~pi~iGDD~TDedmF~~L~~~~~G~~-I~Vgn~~~----~t~A~y~L~dp~eV~ 370 (384)
T PLN02580 299 DWNKGKAVEFLLESLG---LSNCDDVLPIYIGDDRTDEDAFKVLREGNRGYG-ILVSSVPK----ESNAFYSLRDPSEVM 370 (384)
T ss_pred CCCHHHHHHHHHHhcC---CCcccceeEEEECCCchHHHHHHhhhccCCceE-EEEecCCC----CccceEEcCCHHHHH
Confidence 4567899999999999 87653 38999999999999963 533 33432222 456677777777776
Q ss_pred CCCCCC
Q 026543 224 PKDWGL 229 (237)
Q Consensus 224 ~~l~~l 229 (237)
.+|..|
T Consensus 371 ~~L~~L 376 (384)
T PLN02580 371 EFLKSL 376 (384)
T ss_pred HHHHHH
Confidence 665433
|
|
| >KOG4549 consensus Magnesium-dependent phosphatase [General function prediction only] | Back alignment and domain information |
|---|
Probab=94.69 E-value=0.23 Score=33.41 Aligned_cols=84 Identities=12% Similarity=0.132 Sum_probs=59.7
Q ss_pred CCCCCccHHHHHHHHHhCCCCEEEEeCChhhHHHHHHhhhhhhh---------hhcceeeeCCCCCccCCCCCHHHHHHH
Q 026543 92 TSELMPGASHLIRHLHAKGIPMCVATGSLARHFELKTQKHRELF---------SLMHHVVRGDDPEVKQGKPSPDIFLAA 162 (237)
Q Consensus 92 ~~~~~~~~~~~l~~l~~~g~~v~i~s~~~~~~~~~~~~~~~gl~---------~~f~~~~~~~~~~~~~~kp~~~~~~~~ 162 (237)
.+..+++++..|..|+++|+.++++|++....+....++.+.+. ..|+.+..++ . .+-..+..+
T Consensus 42 e~~fY~Di~rIL~dLk~~GVtl~~ASRt~ap~iA~q~L~~fkvk~~Gvlkps~e~ft~~~~g~--g-----sklghfke~ 114 (144)
T KOG4549|consen 42 EMIFYDDIRRILVDLKKLGVTLIHASRTMAPQIASQGLETFKVKQTGVLKPSLEEFTFEAVGD--G-----SKLGHFKEF 114 (144)
T ss_pred eeeeccchhHHHHHHHhcCcEEEEecCCCCHHHHHHHHHHhccCcccccchhhhcCceeeecC--c-----ccchhHHHH
Confidence 37799999999999999999999999988887776666654332 2344444444 1 123345566
Q ss_pred HHHcCCCCCCCCcEEEEecCHHH
Q 026543 163 AKRFEGGPIDSQEILVFEDAPSG 185 (237)
Q Consensus 163 l~~~~~~~~~~~~~~~igD~~~D 185 (237)
-+..+ +..++..+++|-..+
T Consensus 115 ~n~s~---~~~k~~~~fdDesrn 134 (144)
T KOG4549|consen 115 TNNSN---SIEKNKQVFDDESRN 134 (144)
T ss_pred hhccC---cchhceeeecccccC
Confidence 66666 888888888887643
|
|
| >TIGR01460 HAD-SF-IIA Haloacid Dehalogenase Superfamily Class (subfamily) IIA | Back alignment and domain information |
|---|
Probab=94.62 E-value=0.38 Score=36.73 Aligned_cols=86 Identities=15% Similarity=0.215 Sum_probs=52.4
Q ss_pred CCCCccHHHHHHHHHhCCCCEEEEeCChhhH---HHHHHhhhhhhhhhcceeeeCCCCCccCCCCCHHHHHHHHHHcCCC
Q 026543 93 SELMPGASHLIRHLHAKGIPMCVATGSLARH---FELKTQKHRELFSLMHHVVRGDDPEVKQGKPSPDIFLAAAKRFEGG 169 (237)
Q Consensus 93 ~~~~~~~~~~l~~l~~~g~~v~i~s~~~~~~---~~~~~~~~~gl~~~f~~~~~~~~~~~~~~kp~~~~~~~~l~~~~~~ 169 (237)
..++|++.+.++.++++|+++.++||+.... ....+.+.+|+.-..+.++.+. ......+++..
T Consensus 13 ~~~~~~a~e~i~~l~~~g~~~~~~tN~~~~~~~~~~~~l~~~~g~~~~~~~iits~-----------~~~~~~l~~~~-- 79 (236)
T TIGR01460 13 HKPIPGAAEALNRLRAKGKPVVFLTNNSSRSEEDYAEKLSSLLGVDVSPDQIITSG-----------SVTKDLLRQRF-- 79 (236)
T ss_pred CccCcCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHHhcCCCCCHHHeeeHH-----------HHHHHHHHHhC--
Confidence 4578999999999999999999999866322 3334444356655555665443 22333333322
Q ss_pred CCCCCcEEEEecCHHHHHHHHHcCC
Q 026543 170 PIDSQEILVFEDAPSGVLAAKNAGM 194 (237)
Q Consensus 170 ~~~~~~~~~igD~~~Di~~a~~~G~ 194 (237)
+.+.++++|.. ...+.++..|+
T Consensus 80 --~~~~v~v~G~~-~~~~~l~~~g~ 101 (236)
T TIGR01460 80 --EGEKVYVIGVG-ELRESLEGLGF 101 (236)
T ss_pred --CCCEEEEECCH-HHHHHHHHcCC
Confidence 22457777753 34445556664
|
Many of the genes in this subfamily have been annotated as "pNPPase" "4-nitrophenyl phosphatase" or "NPPase". These all refer to the same activity versus a common lab test compound used to determine phosphatase activity. There is no evidence that this activity is physiologically relevant. |
| >PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming] | Back alignment and domain information |
|---|
Probab=94.60 E-value=0.015 Score=52.46 Aligned_cols=72 Identities=17% Similarity=-0.029 Sum_probs=48.5
Q ss_pred CCCCCHHHHHHHHHH---cCCCCCCCCcEEEEecCHHHHHHHHHcCCe-----------EEEEcCCCCCcccccchhhhh
Q 026543 151 QGKPSPDIFLAAAKR---FEGGPIDSQEILVFEDAPSGVLAAKNAGMS-----------VVMVPDPRLDSSYHSNADQLL 216 (237)
Q Consensus 151 ~~kp~~~~~~~~l~~---~~~~~~~~~~~~~igD~~~Di~~a~~~G~~-----------~i~v~~~~~~~~~~~~~~~~~ 216 (237)
.+..|..++..++++ +| +.++.+++|||+.||..|.+.++-. .+.|..|.. ...|.+.+
T Consensus 759 ~gvnKG~Al~~Ll~~~~~~g---~~~d~vl~~GDD~nDedMF~~~~~~~~g~~~~~~~~~~~v~VG~~----~S~A~y~L 831 (854)
T PLN02205 759 QGVSKGLVAKRLLSIMQERG---MLPDFVLCIGDDRSDEDMFEVITSSMAGPSIAPRAEVFACTVGQK----PSKAKYYL 831 (854)
T ss_pred CCCCHHHHHHHHHHHHHhcC---CCcccEEEEcCCccHHHHHHHhhhhccCCcccccccceeEEECCC----CccCeEec
Confidence 344567888888754 57 8999999999999999999988621 123333332 45556666
Q ss_pred hhhcccCCCCCCC
Q 026543 217 SSLLGFNPKDWGL 229 (237)
Q Consensus 217 ~~~~el~~~l~~l 229 (237)
++..|+..+|..|
T Consensus 832 ~d~~eV~~lL~~L 844 (854)
T PLN02205 832 DDTAEIVRLMQGL 844 (854)
T ss_pred CCHHHHHHHHHHH
Confidence 6666665555443
|
|
| >TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB | Back alignment and domain information |
|---|
Probab=94.38 E-value=0.025 Score=41.99 Aligned_cols=26 Identities=31% Similarity=0.419 Sum_probs=16.8
Q ss_pred EEEEecCcccccch-hhHHHHHHHHHH
Q 026543 12 HVIFDMDGLLLDTE-KFYTEVQELILA 37 (237)
Q Consensus 12 ~vifD~DGTL~~~~-~~~~~~~~~~~~ 37 (237)
+|+||+||||+++. ........+++.
T Consensus 1 li~~D~DgTL~~~~~~~~~~~~~~~l~ 27 (204)
T TIGR01484 1 LLFFDLDGTLLDPNAHELSPETIEALE 27 (204)
T ss_pred CEEEeCcCCCcCCCCCcCCHHHHHHHH
Confidence 47899999999875 333333334333
|
The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear. |
| >KOG2134 consensus Polynucleotide kinase 3' phosphatase [Replication, recombination and repair] | Back alignment and domain information |
|---|
Probab=94.36 E-value=0.077 Score=42.68 Aligned_cols=97 Identities=19% Similarity=0.178 Sum_probs=57.3
Q ss_pred CCccHHHHHHHHHhCCCCEEEEeCChhhH--------HHHHH---hhhhhhhhhcceeeeCCCCCccCCCCCHHHHHHHH
Q 026543 95 LMPGASHLIRHLHAKGIPMCVATGSLARH--------FELKT---QKHRELFSLMHHVVRGDDPEVKQGKPSPDIFLAAA 163 (237)
Q Consensus 95 ~~~~~~~~l~~l~~~g~~v~i~s~~~~~~--------~~~~~---~~~~gl~~~f~~~~~~~~~~~~~~kp~~~~~~~~l 163 (237)
+++.+..=++.+.+.|+.++|.||..... +..++ ...+++ . ..+.+.+......||...+++..+
T Consensus 105 l~~~vp~Klktl~~~g~~l~iftnq~~i~r~~~~~~~f~~Ki~~i~anl~v--P--i~~~~A~~~~~yRKP~tGMwe~~~ 180 (422)
T KOG2134|consen 105 LFPEVPSKLKTLYQDGIKLFIFTNQNGIARGKLELEEFKKKIKAIVANLGV--P--IQLLAAIIKGKYRKPSTGMWEFLK 180 (422)
T ss_pred eccccchhhhhhccCCeEEEEEecccccccCcchHHHHHHHHHHHHHhcCC--c--eEEeeeccCCcccCcchhHHHHHH
Confidence 34444455677889999999999843221 11111 111111 1 111222113347899999999998
Q ss_pred HHcCC-CCCCCCcEEEEec---------------CHHHHHHHHHcCCe
Q 026543 164 KRFEG-GPIDSQEILVFED---------------APSGVLAAKNAGMS 195 (237)
Q Consensus 164 ~~~~~-~~~~~~~~~~igD---------------~~~Di~~a~~~G~~ 195 (237)
+..+. ..+.-+.++|+|| |..|+.-|.++|++
T Consensus 181 ~~~nd~~~Isek~s~fvgdaagr~~~~~~~kkd~S~~D~~FAaN~gvk 228 (422)
T KOG2134|consen 181 RLENDSVEISEKASIFVGDAAGRPLDALRRKKDHSSADRKFAANAGVK 228 (422)
T ss_pred HHhhccceeeechhhhhhhhccCccccccCcccccHHHHHHHHhcCCc
Confidence 77762 2255566667776 34789999999965
|
|
| >TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit | Back alignment and domain information |
|---|
Probab=94.25 E-value=0.025 Score=40.76 Aligned_cols=18 Identities=44% Similarity=0.719 Sum_probs=15.6
Q ss_pred CCccEEEEecCcccccch
Q 026543 8 KPITHVIFDMDGLLLDTE 25 (237)
Q Consensus 8 ~~~~~vifD~DGTL~~~~ 25 (237)
+.+|+++||+||||+|..
T Consensus 5 ~~i~~~v~d~dGv~tdg~ 22 (169)
T TIGR02726 5 KNIKLVILDVDGVMTDGR 22 (169)
T ss_pred ccCeEEEEeCceeeECCe
Confidence 458999999999999864
|
Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases. |
| >TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458 | Back alignment and domain information |
|---|
Probab=93.98 E-value=0.072 Score=41.24 Aligned_cols=50 Identities=12% Similarity=0.149 Sum_probs=35.6
Q ss_pred CCccHHHHHHHHHhCCCCEEEEeCChhhHH--HHHHhhhhhhhhhcceeeeC
Q 026543 95 LMPGASHLIRHLHAKGIPMCVATGSLARHF--ELKTQKHRELFSLMHHVVRG 144 (237)
Q Consensus 95 ~~~~~~~~l~~l~~~g~~v~i~s~~~~~~~--~~~~~~~~gl~~~f~~~~~~ 144 (237)
+.|++.++++.|+++|++++++||++.... ....++.+|+.--.+.++++
T Consensus 22 ~~~~a~~al~~l~~~G~~~~~~Tn~~~~~~~~~~~~l~~~g~~~~~~~i~ts 73 (257)
T TIGR01458 22 AVPGSQEAVKRLRGASVKVRFVTNTTKESKQDLLERLQRLGFDISEDEVFTP 73 (257)
T ss_pred cCCCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHHcCCCCCHHHeEcH
Confidence 788999999999999999999999765532 22335556665434455543
|
This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published. |
| >PLN02580 trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=93.68 E-value=0.19 Score=41.12 Aligned_cols=32 Identities=6% Similarity=0.173 Sum_probs=26.0
Q ss_pred CCCCccHHHHHHHHHhCCCCEEEEeCChhhHHH
Q 026543 93 SELMPGASHLIRHLHAKGIPMCVATGSLARHFE 125 (237)
Q Consensus 93 ~~~~~~~~~~l~~l~~~g~~v~i~s~~~~~~~~ 125 (237)
..+.+++.++|+.|.+. .+++|+|++....+.
T Consensus 140 A~~s~~~~~aL~~La~~-~~VAIVSGR~~~~L~ 171 (384)
T PLN02580 140 ALMSDAMRSAVKNVAKY-FPTAIISGRSRDKVY 171 (384)
T ss_pred ccCCHHHHHHHHHHhhC-CCEEEEeCCCHHHHH
Confidence 44667888999999988 689999998877654
|
|
| >TIGR01456 CECR5 HAD-superfamily class IIA hydrolase, TIGR01456, CECR5 | Back alignment and domain information |
|---|
Probab=93.20 E-value=0.48 Score=38.00 Aligned_cols=89 Identities=18% Similarity=0.199 Sum_probs=57.8
Q ss_pred CCCCCccHHHHHHHHHhC----CCCEEEEeCChh---hHHHHHHhhhhhhhhhcceeeeCCCCCccCCCCCHHHHHHHHH
Q 026543 92 TSELMPGASHLIRHLHAK----GIPMCVATGSLA---RHFELKTQKHRELFSLMHHVVRGDDPEVKQGKPSPDIFLAAAK 164 (237)
Q Consensus 92 ~~~~~~~~~~~l~~l~~~----g~~v~i~s~~~~---~~~~~~~~~~~gl~~~f~~~~~~~~~~~~~~kp~~~~~~~~l~ 164 (237)
...+.+++.++++.|+.+ |+++.++||+.. ......+.+.+|+.--.+.++.+. .....+++
T Consensus 14 g~~~i~ga~eal~~L~~~~~~~g~~~~flTNn~g~s~~~~~~~l~~~lG~~~~~~~i~~s~-----------~~~~~ll~ 82 (321)
T TIGR01456 14 GKKPIAGASDALRRLNRNQGQLKIPYIFLTNGGGFSERARAEEISSLLGVDVSPLQVIQSH-----------SPYKSLVN 82 (321)
T ss_pred CccccHHHHHHHHHHhccccccCCCEEEEecCCCCCHHHHHHHHHHHcCCCCCHHHHHhhh-----------HHHHHHHH
Confidence 355799999999999998 999999999763 333333335566543333443322 13345555
Q ss_pred HcCCCCCCCCcEEEEecCHHHHHHHHHcCCeEEE
Q 026543 165 RFEGGPIDSQEILVFEDAPSGVLAAKNAGMSVVM 198 (237)
Q Consensus 165 ~~~~~~~~~~~~~~igD~~~Di~~a~~~G~~~i~ 198 (237)
+++ ..+++||.+. -.+.++.+|+..+.
T Consensus 83 ~~~------~~v~viG~~~-~~~~l~~~G~~~vv 109 (321)
T TIGR01456 83 KYE------KRILAVGTGS-VRGVAEGYGFQNVV 109 (321)
T ss_pred HcC------CceEEEeChH-HHHHHHHcCCcccc
Confidence 544 2678888764 56777789987653
|
The Schizosaccharomyces pombe sequence (EGAD|138276) is annotated as "phosphatidyl synthase," however this is due entirely to a C-terminal region of the protein (outside the region of similarity of this model) which is highly homologous to a family of CDP-alcohol phosphatidyltransferases. (Thus, the annotation of GP|4226073 from C. elegans as similar to phosphatidyl synthase, is a mistake as this gene does not contain the C-terminal portion). The physical connection of the phosphatidyl synthase and the HAD-superfamily hydrolase domain in S. pombe may, however, be an important clue to the substrate for the hydrolases in this equivalog. |
| >PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional | Back alignment and domain information |
|---|
Probab=93.12 E-value=0.24 Score=44.42 Aligned_cols=31 Identities=19% Similarity=0.230 Sum_probs=24.7
Q ss_pred CCccHHHHHHHHHh-CCCCEEEEeCChhhHHH
Q 026543 95 LMPGASHLIRHLHA-KGIPMCVATGSLARHFE 125 (237)
Q Consensus 95 ~~~~~~~~l~~l~~-~g~~v~i~s~~~~~~~~ 125 (237)
+.+.+.+.|+.|.+ .|+.++|+|++......
T Consensus 515 ~~~~~~~~L~~L~~d~g~~V~ivSGR~~~~l~ 546 (726)
T PRK14501 515 PDKELRDLLRRLAADPNTDVAIISGRDRDTLE 546 (726)
T ss_pred CCHHHHHHHHHHHcCCCCeEEEEeCCCHHHHH
Confidence 45677888899988 48999999998776554
|
|
| >KOG2469 consensus IMP-GMP specific 5'-nucleotidase [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
Probab=92.94 E-value=0.25 Score=40.12 Aligned_cols=106 Identities=18% Similarity=0.131 Sum_probs=74.2
Q ss_pred CccHHHHHHHHHhCCCCEEEEeCChhhHHHHHHhhhh--hhhhhcceeeeCC---------------C------------
Q 026543 96 MPGASHLIRHLHAKGIPMCVATGSLARHFELKTQKHR--ELFSLMHHVVRGD---------------D------------ 146 (237)
Q Consensus 96 ~~~~~~~l~~l~~~g~~v~i~s~~~~~~~~~~~~~~~--gl~~~f~~~~~~~---------------~------------ 146 (237)
.+-+..++..++..|.+..++||+.......-....+ ++..+|+.++... .
T Consensus 200 d~~~v~~l~~~r~sGKk~fl~Tns~~~ytd~~mt~~~~~dW~~yfd~v~~~a~Kp~ff~e~~vlreV~t~~g~l~~g~~~ 279 (424)
T KOG2469|consen 200 DGTIVPLLSMLRDSGKKTFLHTNSDWDYTDIFMAFHYGFDWETYFDLVETRAAKPGFFHEGTVLREVEPQEGLLKNGDNT 279 (424)
T ss_pred cCccccchHHHHhhccceEEeeccccchhhHHHHHHhCCCcceeEEEEEEeccCCccccccceeeeeccccccccccccC
Confidence 4444458999999999999999987776553333333 4667888776441 0
Q ss_pred -CCccCCCCCHHHHHHHHHHcCCCCCCCCcEEEEecCH-HHHHHH-HHcCCeEEEEcCCCC
Q 026543 147 -PEVKQGKPSPDIFLAAAKRFEGGPIDSQEILVFEDAP-SGVLAA-KNAGMSVVMVPDPRL 204 (237)
Q Consensus 147 -~~~~~~kp~~~~~~~~l~~~~~~~~~~~~~~~igD~~-~Di~~a-~~~G~~~i~v~~~~~ 204 (237)
+....+++++.....+++.++ ....+++++||.. .|+--- +.-|+.++.|.....
T Consensus 280 ~p~e~~~~ySggs~~~~~~~l~---~~g~diLy~gdHi~~dvl~skk~~~wrt~lv~peL~ 337 (424)
T KOG2469|consen 280 GPLEQGGVYSGGSLKTVETSMK---VKGKDILYGGDHIWGDVLVSKKRRGWRTVLVAPELE 337 (424)
T ss_pred CcchhcccCCcchHHHHHHHhc---ccccceeecccceeeeEEecceecceEEEEEehhhh
Confidence 011134556677888899999 8889999999998 666544 455999888876554
|
|
| >PF13580 SIS_2: SIS domain; PDB: 1TK9_C 2I22_B 2I2W_A 1X92_A 3BJZ_D 2XBL_B 2X3Y_F 2YVA_B 3CVJ_D 3TRJ_D | Back alignment and domain information |
|---|
Probab=92.80 E-value=1.4 Score=30.43 Aligned_cols=102 Identities=16% Similarity=0.210 Sum_probs=51.4
Q ss_pred CCccHHHHHHHHHhCCCCEEEEeCChhhHHHHHH-hhhhhh---hhhcceeeeCCCCCc-----cCCCCCHHHHHHHHHH
Q 026543 95 LMPGASHLIRHLHAKGIPMCVATGSLARHFELKT-QKHREL---FSLMHHVVRGDDPEV-----KQGKPSPDIFLAAAKR 165 (237)
Q Consensus 95 ~~~~~~~~l~~l~~~g~~v~i~s~~~~~~~~~~~-~~~~gl---~~~f~~~~~~~~~~~-----~~~kp~~~~~~~~l~~ 165 (237)
....+.+++....++|-+++++-|+........+ .+..++ .......+.... .. ...-..+.....+++.
T Consensus 20 ~i~~aa~~i~~~~~~gg~i~~~G~G~S~~~a~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~ 98 (138)
T PF13580_consen 20 AIEKAADLIAEALRNGGRIFVCGNGHSAAIASHFAADLGGLFGVNRILLPAIALND-DALTAISNDLEYDEGFARQLLAL 98 (138)
T ss_dssp HHHHHHHHHHHHHHTT--EEEEESTHHHHHHHHHHHHHHCHSSSTSSS-SEEETTS-THHHHHHHHTTGGGTHHHHHHHH
T ss_pred HHHHHHHHHHHHHHCCCEEEEEcCchhhhHHHHHHHHHhcCcCCCccccccccccc-chHhhhhcccchhhHHHHHHHHH
Confidence 4455666777777788899999987664432222 222222 222222222210 10 0111123445667778
Q ss_pred cCCCCCCCCcEEEE----ecCHHHHHHH---HHcCCeEEEEc
Q 026543 166 FEGGPIDSQEILVF----EDAPSGVLAA---KNAGMSVVMVP 200 (237)
Q Consensus 166 ~~~~~~~~~~~~~i----gD~~~Di~~a---~~~G~~~i~v~ 200 (237)
++ +.|.+++++ |.+++=++++ ++.|+++|.++
T Consensus 99 ~~---~~~gDvli~iS~SG~s~~vi~a~~~Ak~~G~~vIalT 137 (138)
T PF13580_consen 99 YD---IRPGDVLIVISNSGNSPNVIEAAEEAKERGMKVIALT 137 (138)
T ss_dssp TT-----TT-EEEEEESSS-SHHHHHHHHHHHHTT-EEEEEE
T ss_pred cC---CCCCCEEEEECCCCCCHHHHHHHHHHHHCCCEEEEEe
Confidence 77 889888877 6777666555 45599999875
|
... |
| >PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming] | Back alignment and domain information |
|---|
Probab=92.77 E-value=0.28 Score=44.61 Aligned_cols=31 Identities=6% Similarity=0.121 Sum_probs=22.0
Q ss_pred CCccHHHHHHHH-HhCCCCEEEEeCChhhHHH
Q 026543 95 LMPGASHLIRHL-HAKGIPMCVATGSLARHFE 125 (237)
Q Consensus 95 ~~~~~~~~l~~l-~~~g~~v~i~s~~~~~~~~ 125 (237)
+.+++.++|+.| ++.|..++|+|++......
T Consensus 617 p~~~~~~~L~~L~~d~g~~VaIvSGR~~~~L~ 648 (854)
T PLN02205 617 PSSKSIDILNTLCRDKNNMVFIVSARSRKTLA 648 (854)
T ss_pred CCHHHHHHHHHHHhcCCCEEEEEeCCCHHHHH
Confidence 445677788887 5567889999987666544
|
|
| >KOG0203 consensus Na+/K+ ATPase, alpha subunit [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=91.41 E-value=0.029 Score=49.50 Aligned_cols=40 Identities=13% Similarity=0.100 Sum_probs=28.9
Q ss_pred CCCCccHHHHHHHHHhCCCCEEEEeCChhhHHHHHHhhhhh
Q 026543 93 SELMPGASHLIRHLHAKGIPMCVATGSLARHFELKTQKHRE 133 (237)
Q Consensus 93 ~~~~~~~~~~l~~l~~~g~~v~i~s~~~~~~~~~~~~~~~g 133 (237)
.+|...+.+.+..++..|++++.+|+... .....+.+..|
T Consensus 589 dPPR~~vP~Av~~CrsAGIkvimVTgdhp-iTAkAiA~~vg 628 (1019)
T KOG0203|consen 589 DPPRAAVPDAVGKCRSAGIKVIMVTGDHP-ITAKAIAKSVG 628 (1019)
T ss_pred CCCcccCchhhhhhhhhCceEEEEecCcc-chhhhhhhhee
Confidence 46788889999999999999999998433 33333444434
|
|
| >PF03031 NIF: NLI interacting factor-like phosphatase; InterPro: IPR004274 The function of this domain is unclear | Back alignment and domain information |
|---|
Probab=91.37 E-value=0.1 Score=37.07 Aligned_cols=16 Identities=25% Similarity=0.671 Sum_probs=12.6
Q ss_pred cEEEEecCcccccchh
Q 026543 11 THVIFDMDGLLLDTEK 26 (237)
Q Consensus 11 ~~vifD~DGTL~~~~~ 26 (237)
|+++||+||||+.+..
T Consensus 1 k~LVlDLD~TLv~~~~ 16 (159)
T PF03031_consen 1 KTLVLDLDGTLVHSSS 16 (159)
T ss_dssp EEEEEE-CTTTEEEES
T ss_pred CEEEEeCCCcEEEEee
Confidence 5899999999997653
|
It is found in proteins of diverse function including phosphatases some of which may be active in active in ternary elongation complexes and a number of NLI interacting factors. In the phospatases this domain is often present N-terminal to the BRCT domain (IPR001357 from INTERPRO).; GO: 0005515 protein binding; PDB: 3L0Y_A 2GHQ_A 3PGL_A 3L0C_B 1TA0_A 2GHT_A 3L0B_B 1T9Z_A 3QLE_A 2Q5E_E .... |
| >TIGR02468 sucrsPsyn_pln sucrose phosphate synthase/possible sucrose phosphate phosphatase, plant | Back alignment and domain information |
|---|
Probab=90.82 E-value=2.7 Score=39.15 Aligned_cols=48 Identities=6% Similarity=0.010 Sum_probs=36.4
Q ss_pred cCCCCCHHHHHHHHHHcCCCCCCCCcE-EEEecCHH-HHHHHHHcCCeEEEEc
Q 026543 150 KQGKPSPDIFLAAAKRFEGGPIDSQEI-LVFEDAPS-GVLAAKNAGMSVVMVP 200 (237)
Q Consensus 150 ~~~kp~~~~~~~~l~~~~~~~~~~~~~-~~igD~~~-Di~~a~~~G~~~i~v~ 200 (237)
+..-.+..+++.+..+.| ++.+++ +|+|||-| |++....--.++|.+.
T Consensus 952 P~~ASKgqAlRyL~~rwg---i~l~~v~VfaGdSGntD~e~Ll~G~~~tvi~~ 1001 (1050)
T TIGR02468 952 PLLASRSQALRYLFVRWG---IELANMAVFVGESGDTDYEGLLGGLHKTVILK 1001 (1050)
T ss_pred eCCCCHHHHHHHHHHHcC---CChHHeEEEeccCCCCCHHHHhCCceeEEEEe
Confidence 344456899999999999 999999 55999998 9887744333455553
|
Members of this family are sucrose-phosphate synthases of plants. This enzyme is known to exist in multigene families in several species of both monocots and dicots. The N-terminal domain is the glucosyltransferase domain. Members of this family also have a variable linker region and a C-terminal domain that resembles sucrose phosphate phosphatase (SPP) (EC 3.1.3.24) (see TIGR01485), the next and final enzyme of sucrose biosynthesis. The SPP-like domain likely serves a binding and not a catalytic function, as the reported SPP is always encoded by a distinct protein. |
| >KOG2882 consensus p-Nitrophenyl phosphatase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=90.18 E-value=5.7 Score=31.28 Aligned_cols=95 Identities=14% Similarity=0.107 Sum_probs=53.0
Q ss_pred CCCCccHHHHHHHHHhCCCCEEEEeCChhhHHHHHH--hhhhhhhhhcceeeeCCCCCccCCCCCHHHHHHHHHHcCCCC
Q 026543 93 SELMPGASHLIRHLHAKGIPMCVATGSLARHFELKT--QKHRELFSLMHHVVRGDDPEVKQGKPSPDIFLAAAKRFEGGP 170 (237)
Q Consensus 93 ~~~~~~~~~~l~~l~~~g~~v~i~s~~~~~~~~~~~--~~~~gl~~~f~~~~~~~~~~~~~~kp~~~~~~~~l~~~~~~~ 170 (237)
..+.||+.+.+..|++.|..+.++||++........ .+.+|+.. +..+ ++ -.........+++..
T Consensus 37 ~~~ipGs~e~l~~L~~~gK~i~fvTNNStksr~~y~kK~~~lG~~~-----v~e~--~i---~ssa~~~a~ylk~~~--- 103 (306)
T KOG2882|consen 37 EKPIPGSPEALNLLKSLGKQIIFVTNNSTKSREQYMKKFAKLGFNS-----VKEE--NI---FSSAYAIADYLKKRK--- 103 (306)
T ss_pred CCCCCChHHHHHHHHHcCCcEEEEeCCCcchHHHHHHHHHHhCccc-----cCcc--cc---cChHHHHHHHHHHhC---
Confidence 458999999999999999999999998765443222 22334331 1111 11 111223333444443
Q ss_pred CCCCcEEEEecCHHHHHHHHHcCCeEEEEcC
Q 026543 171 IDSQEILVFEDAPSGVLAAKNAGMSVVMVPD 201 (237)
Q Consensus 171 ~~~~~~~~igD~~~Di~~a~~~G~~~i~v~~ 201 (237)
...+.+..+|-..- -+-..++|+...+...
T Consensus 104 ~~~k~Vyvig~~gi-~~eL~~aG~~~~g~~~ 133 (306)
T KOG2882|consen 104 PFGKKVYVIGEEGI-REELDEAGFEYFGGGP 133 (306)
T ss_pred cCCCeEEEecchhh-hHHHHHcCceeecCCC
Confidence 34566676764431 1345566665555443
|
|
| >KOG3040 consensus Predicted sugar phosphatase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=89.47 E-value=1.9 Score=31.99 Aligned_cols=48 Identities=10% Similarity=0.142 Sum_probs=33.2
Q ss_pred CCccHHHHHHHHHhCCCCEEEEeCChhhHHH--HHHhhhhhhhhhcceee
Q 026543 95 LMPGASHLIRHLHAKGIPMCVATGSLARHFE--LKTQKHRELFSLMHHVV 142 (237)
Q Consensus 95 ~~~~~~~~l~~l~~~g~~v~i~s~~~~~~~~--~~~~~~~gl~~~f~~~~ 142 (237)
..||+.+.+++|+.++.+|-.+||.+.+.-. ..-++++|+.-.-+.|+
T Consensus 24 avpga~eAl~rLr~~~~kVkFvTNttk~Sk~~l~~rL~rlgf~v~eeei~ 73 (262)
T KOG3040|consen 24 AVPGAVEALKRLRDQHVKVKFVTNTTKESKRNLHERLQRLGFDVSEEEIF 73 (262)
T ss_pred cCCCHHHHHHHHHhcCceEEEEecCcchhHHHHHHHHHHhCCCccHHHhc
Confidence 7899999999999999999999997654422 22344555543333444
|
|
| >KOG2116 consensus Protein involved in plasmid maintenance/nuclear protein involved in lipid metabolism [Cell motility; Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=89.11 E-value=1.3 Score=38.38 Aligned_cols=95 Identities=18% Similarity=0.213 Sum_probs=48.7
Q ss_pred ccHHHHHHHHHhCCCCEEEEeCChhhH--HHHHHhhhhhhhh--hcc-eeeeCCC-------CCccCCCCCH---HHHHH
Q 026543 97 PGASHLIRHLHAKGIPMCVATGSLARH--FELKTQKHRELFS--LMH-HVVRGDD-------PEVKQGKPSP---DIFLA 161 (237)
Q Consensus 97 ~~~~~~l~~l~~~g~~v~i~s~~~~~~--~~~~~~~~~gl~~--~f~-~~~~~~~-------~~~~~~kp~~---~~~~~ 161 (237)
.|+.++...++++||++..+|.+...+ ..+..++.+.=+. +-+ .++.+.+ -++...||.. ..+..
T Consensus 561 ~GVAkLyt~Ik~NGYk~lyLSARaIgQA~~TR~yL~nv~QdG~~LPdGPViLSPd~lf~Al~REVI~RkPe~FKIAcL~D 640 (738)
T KOG2116|consen 561 TGVAKLYTKIKENGYKILYLSARAIGQADSTRQYLKNVEQDGKKLPDGPVILSPDSLFAALHREVIERKPEVFKIACLTD 640 (738)
T ss_pred hhHHHHHHHHHhCCeeEEEEehhhhhhhHHHHHHHHHHhhcCccCCCCCEEeCCCcchHHHHHHHHHcCchhhhHHHHHH
Confidence 466777788899999999998754322 2333343321111 011 1222210 0222334322 11222
Q ss_pred HHHHcCCCCCCCCc--EEEEecCHHHHHHHHHcCCe
Q 026543 162 AAKRFEGGPIDSQE--ILVFEDAPSGVLAAKNAGMS 195 (237)
Q Consensus 162 ~l~~~~~~~~~~~~--~~~igD~~~Di~~a~~~G~~ 195 (237)
+.+.+. +-.+ -..||++.+|+-.=+++|++
T Consensus 641 Ik~LF~----p~~nPFYAgFGNR~TDviSY~~VgVP 672 (738)
T KOG2116|consen 641 IKNLFP----PSGNPFYAGFGNRITDVISYRQVGVP 672 (738)
T ss_pred HHHhcC----CCCCceeeecCCCcccceeeeeecCC
Confidence 222222 2233 34478999999999999986
|
|
| >KOG0209 consensus P-type ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=89.02 E-value=1.7 Score=39.00 Aligned_cols=29 Identities=21% Similarity=0.350 Sum_probs=25.9
Q ss_pred CCCCCccHHHHHHHHHhCCCCEEEEeCCh
Q 026543 92 TSELMPGASHLIRHLHAKGIPMCVATGSL 120 (237)
Q Consensus 92 ~~~~~~~~~~~l~~l~~~g~~v~i~s~~~ 120 (237)
..++.+++++.++.|.+.+.+++.+|+.+
T Consensus 673 ~CPlK~Ds~~~I~el~~SSH~vvMITGDn 701 (1160)
T KOG0209|consen 673 SCPLKPDSKKTIKELNNSSHRVVMITGDN 701 (1160)
T ss_pred eCCCCccHHHHHHHHhccCceEEEEeCCC
Confidence 36889999999999999999999999843
|
|
| >PLN03017 trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=87.97 E-value=0.4 Score=38.98 Aligned_cols=69 Identities=9% Similarity=-0.155 Sum_probs=47.4
Q ss_pred CCCHHHHHHHHHHcCCCCCCC---CcEEEEecCHHHHHHHHHcC-C---eEEEEcCCCCCcccccchhhhhhhhcccCCC
Q 026543 153 KPSPDIFLAAAKRFEGGPIDS---QEILVFEDAPSGVLAAKNAG-M---SVVMVPDPRLDSSYHSNADQLLSSLLGFNPK 225 (237)
Q Consensus 153 kp~~~~~~~~l~~~~~~~~~~---~~~~~igD~~~Di~~a~~~G-~---~~i~v~~~~~~~~~~~~~~~~~~~~~el~~~ 225 (237)
.-|..+.+.+++.++ ... .-.+||||..+|-.+++.+. . -+|.|..... ...|.+.+++.+|+..+
T Consensus 282 ~dKG~Av~~LL~~l~---~~~~~~~~pvyiGDD~TDEDaF~~L~~~~~G~gI~VG~~~k----~T~A~y~L~dp~eV~~f 354 (366)
T PLN03017 282 WDKGKALEFLLESLG---FGNTNNVFPVYIGDDRTDEDAFKMLRDRGEGFGILVSKFPK----DTDASYSLQDPSEVMDF 354 (366)
T ss_pred CCHHHHHHHHHHhcc---cccCCCceEEEeCCCCccHHHHHHHhhcCCceEEEECCCCC----CCcceEeCCCHHHHHHH
Confidence 456889999999998 553 35899999999988888662 1 2455542111 45677777777777665
Q ss_pred CCC
Q 026543 226 DWG 228 (237)
Q Consensus 226 l~~ 228 (237)
|..
T Consensus 355 L~~ 357 (366)
T PLN03017 355 LAR 357 (366)
T ss_pred HHH
Confidence 543
|
|
| >TIGR00685 T6PP trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=87.93 E-value=0.31 Score=37.43 Aligned_cols=15 Identities=33% Similarity=0.523 Sum_probs=12.8
Q ss_pred ccEEEEecCcccccc
Q 026543 10 ITHVIFDMDGLLLDT 24 (237)
Q Consensus 10 ~~~vifD~DGTL~~~ 24 (237)
-++++||+||||++.
T Consensus 3 ~~~l~lD~DGTL~~~ 17 (244)
T TIGR00685 3 KRAFFFDYDGTLSEI 17 (244)
T ss_pred cEEEEEecCccccCC
Confidence 378999999999964
|
At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes. |
| >PLN02151 trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=87.73 E-value=0.25 Score=39.95 Aligned_cols=67 Identities=12% Similarity=-0.094 Sum_probs=45.7
Q ss_pred CCCHHHHHHHHHHcCCCCCCCC---cEEEEecCHHHHHHHHHc-----CCeEEEEcCCCCCcccccchhhhhhhhcccCC
Q 026543 153 KPSPDIFLAAAKRFEGGPIDSQ---EILVFEDAPSGVLAAKNA-----GMSVVMVPDPRLDSSYHSNADQLLSSLLGFNP 224 (237)
Q Consensus 153 kp~~~~~~~~l~~~~~~~~~~~---~~~~igD~~~Di~~a~~~-----G~~~i~v~~~~~~~~~~~~~~~~~~~~~el~~ 224 (237)
..|..+...++++++ .... -.+||||..+|-.+++.+ |+ .|.|..+.. ...|.+.+++.+|+..
T Consensus 268 ~dKG~Av~~Ll~~~~---~~~~~~~~pvyiGDD~TDEDaF~~L~~~~~G~-gI~Vg~~~k----~T~A~y~L~dp~eV~~ 339 (354)
T PLN02151 268 WDKGKALEFLLESLG---YANCTDVFPIYIGDDRTDEDAFKILRDKKQGL-GILVSKYAK----ETNASYSLQEPDEVME 339 (354)
T ss_pred CCHHHHHHHHHHhcc---cccCCCCeEEEEcCCCcHHHHHHHHhhcCCCc-cEEeccCCC----CCcceEeCCCHHHHHH
Confidence 356889999999988 5533 389999999998888755 32 344443221 4567777777777765
Q ss_pred CCC
Q 026543 225 KDW 227 (237)
Q Consensus 225 ~l~ 227 (237)
+|.
T Consensus 340 ~L~ 342 (354)
T PLN02151 340 FLE 342 (354)
T ss_pred HHH
Confidence 553
|
|
| >PF06014 DUF910: Bacterial protein of unknown function (DUF910); InterPro: IPR009256 This family consists of several short bacterial proteins of unknown function | Back alignment and domain information |
|---|
Probab=87.19 E-value=0.49 Score=27.55 Aligned_cols=27 Identities=15% Similarity=0.026 Sum_probs=17.5
Q ss_pred HHHHHHHHcCCCCCCCCcEEEEecCHHHHHHHHH
Q 026543 158 IFLAAAKRFEGGPIDSQEILVFEDAPSGVLAAKN 191 (237)
Q Consensus 158 ~~~~~l~~~~~~~~~~~~~~~igD~~~Di~~a~~ 191 (237)
-.+++++++| -.+++||+..|+++...
T Consensus 6 DVqQLLK~fG-------~~IY~gdr~~DielM~~ 32 (62)
T PF06014_consen 6 DVQQLLKKFG-------IIIYVGDRLWDIELMEI 32 (62)
T ss_dssp HHHHHHHTTS------------S-HHHHHHHHHH
T ss_pred HHHHHHHHCC-------EEEEeCChHHHHHHHHH
Confidence 3678899999 67999999999998753
|
; PDB: 2NN4_A. |
| >CHL00162 thiG thiamin biosynthesis protein G; Validated | Back alignment and domain information |
|---|
Probab=86.84 E-value=9.5 Score=29.38 Aligned_cols=99 Identities=14% Similarity=0.101 Sum_probs=65.2
Q ss_pred CCCccHHHHH---HHHHhCCCCEEEEeCChhhHHHHHHhhhhhhhhhcceeeeCCCCCccCCCCCHHHHHHHHHHcCCCC
Q 026543 94 ELMPGASHLI---RHLHAKGIPMCVATGSLARHFELKTQKHRELFSLMHHVVRGDDPEVKQGKPSPDIFLAAAKRFEGGP 170 (237)
Q Consensus 94 ~~~~~~~~~l---~~l~~~g~~v~i~s~~~~~~~~~~~~~~~gl~~~f~~~~~~~~~~~~~~kp~~~~~~~~l~~~~~~~ 170 (237)
.+.|+..+++ +.|-+.|+.|.-+++.+.- ...+ +...|.... +-.++. ...+.+-.++..++.++++..
T Consensus 118 ~LlPD~~etl~Aae~Lv~eGF~VlPY~~~D~v-~a~r-Led~Gc~aV--MPlgsP-IGSg~Gl~n~~~l~~i~e~~~--- 189 (267)
T CHL00162 118 YLLPDPIGTLKAAEFLVKKGFTVLPYINADPM-LAKH-LEDIGCATV--MPLGSP-IGSGQGLQNLLNLQIIIENAK--- 189 (267)
T ss_pred ccCCChHHHHHHHHHHHHCCCEEeecCCCCHH-HHHH-HHHcCCeEE--eeccCc-ccCCCCCCCHHHHHHHHHcCC---
Confidence 4667666666 5667889999999984443 3333 443443221 111111 012356678999999988877
Q ss_pred CCCCcEEEEecC---HHHHHHHHHcCCeEEEEcCCCC
Q 026543 171 IDSQEILVFEDA---PSGVLAAKNAGMSVVMVPDPRL 204 (237)
Q Consensus 171 ~~~~~~~~igD~---~~Di~~a~~~G~~~i~v~~~~~ 204 (237)
++ +.+|-+ ++|+..|-+.|+..++++++-.
T Consensus 190 vp----VivdAGIgt~sDa~~AmElGaDgVL~nSaIa 222 (267)
T CHL00162 190 IP----VIIDAGIGTPSEASQAMELGASGVLLNTAVA 222 (267)
T ss_pred Cc----EEEeCCcCCHHHHHHHHHcCCCEEeecceee
Confidence 54 666644 4999999999999999988655
|
|
| >PF05690 ThiG: Thiazole biosynthesis protein ThiG; InterPro: IPR008867 This family consists of several bacterial thiazole biosynthesis protein G sequences | Back alignment and domain information |
|---|
Probab=86.73 E-value=9.5 Score=29.01 Aligned_cols=98 Identities=13% Similarity=0.170 Sum_probs=57.9
Q ss_pred CCCCccHHHHH---HHHHhCCCCEEEEeCChhhHHHHHHhhhhhhhhhcceeeeCCCCCccCCCCCHHHHHHHHHHcCCC
Q 026543 93 SELMPGASHLI---RHLHAKGIPMCVATGSLARHFELKTQKHRELFSLMHHVVRGDDPEVKQGKPSPDIFLAAAKRFEGG 169 (237)
Q Consensus 93 ~~~~~~~~~~l---~~l~~~g~~v~i~s~~~~~~~~~~~~~~~gl~~~f~~~~~~~~~~~~~~kp~~~~~~~~l~~~~~~ 169 (237)
-.+.|+..+++ +.|-+.|+.|.-+++.+.- ...+ +...|.... +-.++.- ..+.+--++..++.++++.+
T Consensus 103 ~~L~PD~~etl~Aae~Lv~eGF~VlPY~~~D~v-~akr-L~d~Gcaav--MPlgsPI-GSg~Gi~n~~~l~~i~~~~~-- 175 (247)
T PF05690_consen 103 KTLLPDPIETLKAAEILVKEGFVVLPYCTDDPV-LAKR-LEDAGCAAV--MPLGSPI-GSGRGIQNPYNLRIIIERAD-- 175 (247)
T ss_dssp TT--B-HHHHHHHHHHHHHTT-EEEEEE-S-HH-HHHH-HHHTT-SEB--EEBSSST-TT---SSTHHHHHHHHHHGS--
T ss_pred CCcCCChhHHHHHHHHHHHCCCEEeecCCCCHH-HHHH-HHHCCCCEE--Eeccccc-ccCcCCCCHHHHHHHHHhcC--
Confidence 34567776666 5667889999999984443 3333 343443221 1122210 22355678999999999998
Q ss_pred CCCCCcEEEEecC---HHHHHHHHHcCCeEEEEcCC
Q 026543 170 PIDSQEILVFEDA---PSGVLAAKNAGMSVVMVPDP 202 (237)
Q Consensus 170 ~~~~~~~~~igD~---~~Di~~a~~~G~~~i~v~~~ 202 (237)
++ +.|+-+ ++|...|-+.|+..+++++.
T Consensus 176 -vP----vIvDAGiG~pSdaa~AMElG~daVLvNTA 206 (247)
T PF05690_consen 176 -VP----VIVDAGIGTPSDAAQAMELGADAVLVNTA 206 (247)
T ss_dssp -SS----BEEES---SHHHHHHHHHTT-SEEEESHH
T ss_pred -Cc----EEEeCCCCCHHHHHHHHHcCCceeehhhH
Confidence 76 566644 59999999999999999764
|
ThiG, together with ThiF and ThiH, is proposed to be involved in the synthesis of 4-methyl-5-(b-hydroxyethyl)thiazole (THZ) which is an intermediate in the thiazole production pathway [].; GO: 0009228 thiamine biosynthetic process; PDB: 1WV2_B 1TYG_C 1XM3_B 2HTM_C 2YZR_C. |
| >PRK10513 sugar phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=86.38 E-value=1.5 Score=33.98 Aligned_cols=40 Identities=20% Similarity=0.276 Sum_probs=30.1
Q ss_pred CCccHHHHHHHHHhCCCCEEEEeCChhhHHHHHHhhhhhhh
Q 026543 95 LMPGASHLIRHLHAKGIPMCVATGSLARHFELKTQKHRELF 135 (237)
Q Consensus 95 ~~~~~~~~l~~l~~~g~~v~i~s~~~~~~~~~~~~~~~gl~ 135 (237)
+.+...+.++.++++|++++++|++...... .+++.+++.
T Consensus 21 i~~~~~~ai~~l~~~G~~~~iaTGR~~~~~~-~~~~~l~~~ 60 (270)
T PRK10513 21 ISPAVKQAIAAARAKGVNVVLTTGRPYAGVH-RYLKELHME 60 (270)
T ss_pred cCHHHHHHHHHHHHCCCEEEEecCCChHHHH-HHHHHhCCC
Confidence 3455668889999999999999998877655 355656654
|
|
| >PTZ00445 p36-lilke protein; Provisional | Back alignment and domain information |
|---|
Probab=86.37 E-value=0.62 Score=34.64 Aligned_cols=16 Identities=19% Similarity=0.171 Sum_probs=14.3
Q ss_pred CCccEEEEecCccccc
Q 026543 8 KPITHVIFDMDGLLLD 23 (237)
Q Consensus 8 ~~~~~vifD~DGTL~~ 23 (237)
..+|+|++|+|.||+.
T Consensus 41 ~GIk~Va~D~DnTlI~ 56 (219)
T PTZ00445 41 CGIKVIASDFDLTMIT 56 (219)
T ss_pred cCCeEEEecchhhhhh
Confidence 3589999999999997
|
|
| >PF02358 Trehalose_PPase: Trehalose-phosphatase; InterPro: IPR003337 Trehalose-phosphatases 3 | Back alignment and domain information |
|---|
Probab=85.94 E-value=1.5 Score=33.42 Aligned_cols=61 Identities=10% Similarity=-0.008 Sum_probs=30.3
Q ss_pred CCHHHHHHHHHHcCCCCCC---CCcEEEEecCHHHHHHHHHcCCe-----EEEEcCCCCCcccccchhhhhhh
Q 026543 154 PSPDIFLAAAKRFEGGPID---SQEILVFEDAPSGVLAAKNAGMS-----VVMVPDPRLDSSYHSNADQLLSS 218 (237)
Q Consensus 154 p~~~~~~~~l~~~~~~~~~---~~~~~~igD~~~Di~~a~~~G~~-----~i~v~~~~~~~~~~~~~~~~~~~ 218 (237)
.|..+.+.++++++ .. +.-++|+||..+|-.+.+.+.-. .+.|..... ......|.+.++|
T Consensus 165 ~KG~av~~ll~~~~---~~~~~~~~~l~~GDD~tDE~~f~~~~~~~~~~~~i~V~~~~~-~~~~t~A~y~l~~ 233 (235)
T PF02358_consen 165 NKGSAVRRLLEELP---FAGPKPDFVLYIGDDRTDEDAFRALRELEEGGFGIKVGSVSV-GEKPTAASYRLDD 233 (235)
T ss_dssp -HHHHHHHHHTTS------------EEEEESSHHHHHHHHTTTTS----EEEEES------------------
T ss_pred ChHHHHHHHHHhcC---ccccccceeEEecCCCCCHHHHHHHHhcccCCCCeEEEeecc-ccccccccccccc
Confidence 36788999999998 65 78999999999999999887542 455544322 2234566666554
|
1.3.12 from EC catalyse the de-phosphorylation of trehalose-6-phosphate to trehalose and orthophosphate. Trehalose is a common disaccharide of bacteria, fungi and invertebrates that appears to play a major role in desiccation tolerance. A pathway for trehalose biosynthesis may also exist in plants []. The trehalose-phosphatase signature is found in the C terminus of trehalose-6-phosphate synthase 2.4.1.15 from EC adjacent to the trehalose-6-phosphate synthase domain (see IPR001830 from INTERPRO). It would appear that the two equivalent genes in the Escherichia coli otsBA operon: otsA, the trehalose-6-phosphate synthase and otsB, trehalose-phosphatase (this family) have undergone gene fusion in most eukaryotes [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1U02_A. |
| >PLN03017 trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=85.82 E-value=0.44 Score=38.71 Aligned_cols=12 Identities=33% Similarity=0.512 Sum_probs=10.8
Q ss_pred cEEEEecCcccc
Q 026543 11 THVIFDMDGLLL 22 (237)
Q Consensus 11 ~~vifD~DGTL~ 22 (237)
.+|++|+||||+
T Consensus 112 ~llflD~DGTL~ 123 (366)
T PLN03017 112 IVMFLDYDGTLS 123 (366)
T ss_pred eEEEEecCCcCc
Confidence 578889999999
|
|
| >PLN03063 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional | Back alignment and domain information |
|---|
Probab=85.65 E-value=1.4 Score=40.07 Aligned_cols=15 Identities=20% Similarity=0.282 Sum_probs=12.6
Q ss_pred ccEEEEecCcccccc
Q 026543 10 ITHVIFDMDGLLLDT 24 (237)
Q Consensus 10 ~~~vifD~DGTL~~~ 24 (237)
-++++||+||||...
T Consensus 507 ~rll~LDyDGTL~~~ 521 (797)
T PLN03063 507 NRLLILGFYGTLTEP 521 (797)
T ss_pred CeEEEEecCccccCC
Confidence 378999999999953
|
|
| >PLN02151 trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=85.28 E-value=0.66 Score=37.57 Aligned_cols=12 Identities=33% Similarity=0.512 Sum_probs=10.9
Q ss_pred cEEEEecCcccc
Q 026543 11 THVIFDMDGLLL 22 (237)
Q Consensus 11 ~~vifD~DGTL~ 22 (237)
.++++|+||||.
T Consensus 99 ~ll~lDyDGTL~ 110 (354)
T PLN02151 99 IVMFLDYDGTLS 110 (354)
T ss_pred eEEEEecCccCC
Confidence 578889999999
|
|
| >PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=85.26 E-value=1.5 Score=34.15 Aligned_cols=41 Identities=27% Similarity=0.268 Sum_probs=31.3
Q ss_pred CccHHHHHHHHHhCCCCEEEEeCChhhHHHHHHhhhhhhhhh
Q 026543 96 MPGASHLIRHLHAKGIPMCVATGSLARHFELKTQKHRELFSL 137 (237)
Q Consensus 96 ~~~~~~~l~~l~~~g~~v~i~s~~~~~~~~~~~~~~~gl~~~ 137 (237)
.+.+.++++.|+++|++++++|++....+. .+++.+|+..+
T Consensus 23 ~~~~~~ai~~l~~~Gi~~~iaTgR~~~~~~-~~~~~l~l~~~ 63 (273)
T PRK00192 23 YEPAKPALKALKEKGIPVIPCTSKTAAEVE-VLRKELGLEDP 63 (273)
T ss_pred cHHHHHHHHHHHHCCCEEEEEcCCCHHHHH-HHHHHcCCCCC
Confidence 355778899999999999999998776655 45666676543
|
|
| >KOG3189 consensus Phosphomannomutase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=84.77 E-value=0.83 Score=33.53 Aligned_cols=28 Identities=29% Similarity=0.326 Sum_probs=20.5
Q ss_pred cEEEEecCcccccchhhHHHHHHHHHHH
Q 026543 11 THVIFDMDGLLLDTEKFYTEVQELILAR 38 (237)
Q Consensus 11 ~~vifD~DGTL~~~~~~~~~~~~~~~~~ 38 (237)
-+++||+||||.........-+.+.+..
T Consensus 12 ~l~lfdvdgtLt~~r~~~~~e~~~~l~~ 39 (252)
T KOG3189|consen 12 TLCLFDVDGTLTPPRQKVTPEMLEFLQK 39 (252)
T ss_pred eEEEEecCCccccccccCCHHHHHHHHH
Confidence 4789999999998876655555555544
|
|
| >TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase | Back alignment and domain information |
|---|
Probab=84.72 E-value=1.8 Score=32.82 Aligned_cols=40 Identities=13% Similarity=0.125 Sum_probs=30.6
Q ss_pred CccHHHHHHHHHhCCCCEEEEeCChhhHHHHHHhhhhhhhh
Q 026543 96 MPGASHLIRHLHAKGIPMCVATGSLARHFELKTQKHRELFS 136 (237)
Q Consensus 96 ~~~~~~~l~~l~~~g~~v~i~s~~~~~~~~~~~~~~~gl~~ 136 (237)
.+...++++.|+++|++++++|++....+. .+++.+|+..
T Consensus 17 ~~~~~~ai~~l~~~G~~~vi~TgR~~~~~~-~~~~~lg~~~ 56 (225)
T TIGR02461 17 PGPAREALEELKDLGFPIVFVSSKTRAEQE-YYREELGVEP 56 (225)
T ss_pred chHHHHHHHHHHHCCCEEEEEeCCCHHHHH-HHHHHcCCCC
Confidence 345789999999999999999998776655 3566666543
|
Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles. |
| >KOG0323 consensus TFIIF-interacting CTD phosphatases, including NLI-interacting factor [Transcription] | Back alignment and domain information |
|---|
Probab=84.57 E-value=3.3 Score=36.28 Aligned_cols=80 Identities=14% Similarity=0.071 Sum_probs=50.1
Q ss_pred CCCCCccHHHHHHHHHhCCCCEEEEeCChhhHHHHHHhhhhhhh-hhc-ceeeeCCCCCccCCCCCHHHHHHHHHHcCCC
Q 026543 92 TSELMPGASHLIRHLHAKGIPMCVATGSLARHFELKTQKHRELF-SLM-HHVVRGDDPEVKQGKPSPDIFLAAAKRFEGG 169 (237)
Q Consensus 92 ~~~~~~~~~~~l~~l~~~g~~v~i~s~~~~~~~~~~~~~~~gl~-~~f-~~~~~~~~~~~~~~kp~~~~~~~~l~~~~~~ 169 (237)
.+++.|++.+||+.+.+. +.++|+|-+.+.+.. .+.+.+.-. .+| |.|++.+ +.+..| .+.-....
T Consensus 199 ~vKlRP~~~efL~~~skl-femhVyTmg~R~YA~-~i~~liDP~~~lF~dRIisrd--e~~~~k--------t~dL~~~~ 266 (635)
T KOG0323|consen 199 LVKLRPFVHEFLKEANKL-FEMHVYTMGTRDYAL-EIAKLIDPEGKYFGDRIISRD--ESPFFK--------TLDLVLLF 266 (635)
T ss_pred EEEeCccHHHHHHHHHhh-ceeEEEeccchHHHH-HHHHHhCCCCccccceEEEec--CCCccc--------ccccccCC
Confidence 378999999999999987 999999998887654 334432211 234 5777777 433222 22222200
Q ss_pred CCCCCcEEEEecCH
Q 026543 170 PIDSQEILVFEDAP 183 (237)
Q Consensus 170 ~~~~~~~~~igD~~ 183 (237)
+..++.++.|+|+.
T Consensus 267 p~g~smvvIIDDr~ 280 (635)
T KOG0323|consen 267 PCGDSMVVIIDDRS 280 (635)
T ss_pred CCCCccEEEEeCcc
Confidence 13344488888876
|
|
| >COG4850 Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=84.04 E-value=6.6 Score=31.31 Aligned_cols=85 Identities=15% Similarity=0.255 Sum_probs=54.0
Q ss_pred CCCCCccHHHHHHHHHhCC-CCEEEEeCChhhHHHHHHhhhhh-------------hhhhcceeeeCCCCCccCCCCCHH
Q 026543 92 TSELMPGASHLIRHLHAKG-IPMCVATGSLARHFELKTQKHRE-------------LFSLMHHVVRGDDPEVKQGKPSPD 157 (237)
Q Consensus 92 ~~~~~~~~~~~l~~l~~~g-~~v~i~s~~~~~~~~~~~~~~~g-------------l~~~f~~~~~~~~~~~~~~kp~~~ 157 (237)
.-.++||+..+.+.|.+.| .++..+||+.-..+. .+-+.++ +...++.++.+. ... +..
T Consensus 194 tr~~ipGV~~~yr~l~~~~~apvfYvSnSPw~~f~-~L~efi~~~~~P~GPl~L~~~g~~~~~i~~sg----a~r--K~~ 266 (373)
T COG4850 194 TRQVIPGVSAWYRALTNLGDAPVFYVSNSPWQLFP-TLQEFITNRNFPYGPLLLRRWGGVLDNIIESG----AAR--KGQ 266 (373)
T ss_pred ccCCCCCHHHHHHHHHhcCCCCeEEecCChhHhHH-HHHHHHhcCCCCCCchhHhhcCCcccccccch----hhh--ccc
Confidence 3679999999999999987 899999996654433 1222211 112234444332 111 344
Q ss_pred HHHHHHHHcCCCCCCCCcEEEEecCH-HHHHH
Q 026543 158 IFLAAAKRFEGGPIDSQEILVFEDAP-SGVLA 188 (237)
Q Consensus 158 ~~~~~l~~~~~~~~~~~~~~~igD~~-~Di~~ 188 (237)
.+..++.++. ..+.+.|||+- .|.+.
T Consensus 267 ~l~nil~~~p-----~~kfvLVGDsGE~DpeI 293 (373)
T COG4850 267 SLRNILRRYP-----DRKFVLVGDSGEHDPEI 293 (373)
T ss_pred HHHHHHHhCC-----CceEEEecCCCCcCHHH
Confidence 5666777776 56899999996 77653
|
|
| >TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal | Back alignment and domain information |
|---|
Probab=83.83 E-value=1.8 Score=32.41 Aligned_cols=40 Identities=23% Similarity=0.218 Sum_probs=30.1
Q ss_pred CCccHHHHHHHHHhCCCCEEEEeCChhhHHHHHHhhhhhhh
Q 026543 95 LMPGASHLIRHLHAKGIPMCVATGSLARHFELKTQKHRELF 135 (237)
Q Consensus 95 ~~~~~~~~l~~l~~~g~~v~i~s~~~~~~~~~~~~~~~gl~ 135 (237)
+.+...+.++.|+++|++++++|++...... .+.+.+++.
T Consensus 19 i~~~~~~~i~~l~~~g~~~~~~TGR~~~~~~-~~~~~l~~~ 58 (215)
T TIGR01487 19 ISERAIEAIRKAEKKGIPVSLVTGNTVPFAR-ALAVLIGTS 58 (215)
T ss_pred cCHHHHHHHHHHHHCCCEEEEEcCCcchhHH-HHHHHhCCC
Confidence 5566778899999999999999998776654 345555543
|
TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. |
| >PRK01158 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=82.78 E-value=2.1 Score=32.28 Aligned_cols=41 Identities=27% Similarity=0.242 Sum_probs=30.1
Q ss_pred CCccHHHHHHHHHhCCCCEEEEeCChhhHHHHHHhhhhhhhh
Q 026543 95 LMPGASHLIRHLHAKGIPMCVATGSLARHFELKTQKHRELFS 136 (237)
Q Consensus 95 ~~~~~~~~l~~l~~~g~~v~i~s~~~~~~~~~~~~~~~gl~~ 136 (237)
+.+...+.++.++++|++++++|++...... .+.+.+++..
T Consensus 21 i~~~~~~al~~l~~~G~~~~iaTGR~~~~~~-~~~~~l~~~~ 61 (230)
T PRK01158 21 LSLKAVEAIRKAEKLGIPVILATGNVLCFAR-AAAKLIGTSG 61 (230)
T ss_pred cCHHHHHHHHHHHHCCCEEEEEcCCchHHHH-HHHHHhCCCC
Confidence 4456678888999999999999998776554 3455566543
|
|
| >COG0731 Fe-S oxidoreductases [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=82.68 E-value=2.7 Score=33.16 Aligned_cols=34 Identities=18% Similarity=0.276 Sum_probs=29.9
Q ss_pred CCCCCccHHHHHHHHHhCC-CCEEEEeCChhhHHH
Q 026543 92 TSELMPGASHLIRHLHAKG-IPMCVATGSLARHFE 125 (237)
Q Consensus 92 ~~~~~~~~~~~l~~l~~~g-~~v~i~s~~~~~~~~ 125 (237)
++.++|.+-++++.+++.| .+++++||+....+.
T Consensus 90 EPTLy~~L~elI~~~k~~g~~~tflvTNgslpdv~ 124 (296)
T COG0731 90 EPTLYPNLGELIEEIKKRGKKTTFLVTNGSLPDVL 124 (296)
T ss_pred CcccccCHHHHHHHHHhcCCceEEEEeCCChHHHH
Confidence 5789999999999999999 799999998885444
|
|
| >PF04413 Glycos_transf_N: 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase); InterPro: IPR007507 This is a domain found in proteins that transfer activated sugars to a variety of substrates, including glycogen, fructose-6-phosphate and lipopolysaccharides | Back alignment and domain information |
|---|
Probab=82.65 E-value=4.5 Score=29.64 Aligned_cols=72 Identities=13% Similarity=0.228 Sum_probs=31.8
Q ss_pred HHHHHHHhCCCCEEEEeCChhhHHHHHHhhhh----hhhhhcceeeeCCCCCccCCCCCHHHHHHHHHHcCCCCCCCCcE
Q 026543 101 HLIRHLHAKGIPMCVATGSLARHFELKTQKHR----ELFSLMHHVVRGDDPEVKQGKPSPDIFLAAAKRFEGGPIDSQEI 176 (237)
Q Consensus 101 ~~l~~l~~~g~~v~i~s~~~~~~~~~~~~~~~----gl~~~f~~~~~~~~~~~~~~kp~~~~~~~~l~~~~~~~~~~~~~ 176 (237)
.++..++++|++++++.+.-.........+.. .+...||.+...+ +.-..-+.++| ++++++
T Consensus 109 nll~~a~~~~ip~~LvNarls~~s~~~~~~~~~~~r~~l~~f~~i~aqs-----------~~da~r~~~lG---~~~~~v 174 (186)
T PF04413_consen 109 NLLREAKRRGIPVVLVNARLSERSFRRYRRFPFLFRPLLSRFDRILAQS-----------EADAERFRKLG---APPERV 174 (186)
T ss_dssp HHHHH-----S-EEEEEE--------------HHHHHHGGG-SEEEESS-----------HHHHHHHHTTT----S--SE
T ss_pred HHHHHHhhcCCCEEEEeeeeccccchhhhhhHHHHHHHHHhCCEEEECC-----------HHHHHHHHHcC---CCcceE
Confidence 67888899999999998754433221111111 2446678887765 23455677899 999999
Q ss_pred EEEecCHHHH
Q 026543 177 LVFEDAPSGV 186 (237)
Q Consensus 177 ~~igD~~~Di 186 (237)
...||-.-|.
T Consensus 175 ~v~GnlKfd~ 184 (186)
T PF04413_consen 175 HVTGNLKFDQ 184 (186)
T ss_dssp EE---GGG--
T ss_pred EEeCcchhcc
Confidence 9999987664
|
Proteins bearing this domain transfer UDP, ADP, GDP or CMP linked sugars. This region is flanked at the N terminus by a signal peptide and at the C terminus by a glycosyl transferase group 1 domain (IPR001296 from INTERPRO). The eukaryotic glycogen synthases may be distant members of this bacterial family [].; GO: 0005529 sugar binding, 0016740 transferase activity, 0005975 carbohydrate metabolic process; PDB: 2XCI_A 2XCU_B. |
| >TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein | Back alignment and domain information |
|---|
Probab=82.02 E-value=2.4 Score=31.76 Aligned_cols=36 Identities=31% Similarity=0.361 Sum_probs=28.6
Q ss_pred HHHHHHHHHhCCCCEEEEeCChhhHHHHHHhhhhhhh
Q 026543 99 ASHLIRHLHAKGIPMCVATGSLARHFELKTQKHRELF 135 (237)
Q Consensus 99 ~~~~l~~l~~~g~~v~i~s~~~~~~~~~~~~~~~gl~ 135 (237)
..+.++.++++|++++++||+....+. .+.+.+++.
T Consensus 21 ~~~~l~~l~~~gi~~~i~TgR~~~~~~-~~~~~l~~~ 56 (221)
T TIGR02463 21 AAPWLTRLQEAGIPVILCTSKTAAEVE-YLQKALGLT 56 (221)
T ss_pred HHHHHHHHHHCCCeEEEEcCCCHHHHH-HHHHHcCCC
Confidence 568889999999999999998877655 456666664
|
This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate. |
| >TIGR02329 propionate_PrpR propionate catabolism operon regulatory protein PrpR | Back alignment and domain information |
|---|
Probab=80.96 E-value=12 Score=32.38 Aligned_cols=88 Identities=10% Similarity=-0.062 Sum_probs=49.1
Q ss_pred cHHHHHHHHHhCCCCEEEEeCChhhHHHHHHhhhhhhhhhcceeeeCCCCCccCCCCCHHHHHHHHHHcCCCCCCCCcEE
Q 026543 98 GASHLIRHLHAKGIPMCVATGSLARHFELKTQKHRELFSLMHHVVRGDDPEVKQGKPSPDIFLAAAKRFEGGPIDSQEIL 177 (237)
Q Consensus 98 ~~~~~l~~l~~~g~~v~i~s~~~~~~~~~~~~~~~gl~~~f~~~~~~~~~~~~~~kp~~~~~~~~l~~~~~~~~~~~~~~ 177 (237)
++...|..+++.+-++++++......-...+.+.+++. +..+...+ .+-....++++. -.. --+
T Consensus 85 Dil~al~~a~~~~~~ia~vg~~~~~~~~~~~~~ll~~~--i~~~~~~~----------~~e~~~~~~~l~---~~G-~~~ 148 (526)
T TIGR02329 85 DVMQALARARRIASSIGVVTHQDTPPALRRFQAAFNLD--IVQRSYVT----------EEDARSCVNDLR---ARG-IGA 148 (526)
T ss_pred hHHHHHHHHHhcCCcEEEEecCcccHHHHHHHHHhCCc--eEEEEecC----------HHHHHHHHHHHH---HCC-CCE
Confidence 44555555566677899998754443333344433332 12221111 222333333332 111 337
Q ss_pred EEecCHHHHHHHHHcCCeEEEEcCC
Q 026543 178 VFEDAPSGVLAAKNAGMSVVMVPDP 202 (237)
Q Consensus 178 ~igD~~~Di~~a~~~G~~~i~v~~~ 202 (237)
+|||... ...|+++|+..+.+.++
T Consensus 149 viG~~~~-~~~A~~~gl~~ili~s~ 172 (526)
T TIGR02329 149 VVGAGLI-TDLAEQAGLHGVFLYSA 172 (526)
T ss_pred EECChHH-HHHHHHcCCceEEEecH
Confidence 7899975 57899999999999875
|
At least five distinct pathways exists for the catabolism of propionate by way of propionyl-CoA. Members of this family represent the transcriptional regulatory protein PrpR, whose gene is found in most cases divergently transcribed from an operon for the methylcitric acid cycle of propionate catabolism. 2-methylcitric acid, a catabolite by this pathway, is a coactivator of PrpR. |
| >COG5083 SMP2 Uncharacterized protein involved in plasmid maintenance [General function prediction only] | Back alignment and domain information |
|---|
Probab=80.92 E-value=1.1 Score=37.01 Aligned_cols=25 Identities=20% Similarity=0.367 Sum_probs=18.5
Q ss_pred CCCCcEE-EEecCHHHHHHHHHcCCe
Q 026543 171 IDSQEIL-VFEDAPSGVLAAKNAGMS 195 (237)
Q Consensus 171 ~~~~~~~-~igD~~~Di~~a~~~G~~ 195 (237)
+.+..-. -||+...|+.+-++.|++
T Consensus 491 ~e~~PFyAGFGNriTDvisY~~vgIp 516 (580)
T COG5083 491 IEFDPFYAGFGNRITDVISYSNVGIP 516 (580)
T ss_pred CcCChhhccccccchhheeeccccCC
Confidence 4555433 678889999998888875
|
|
| >TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily | Back alignment and domain information |
|---|
Probab=80.92 E-value=2.8 Score=32.26 Aligned_cols=40 Identities=25% Similarity=0.361 Sum_probs=29.5
Q ss_pred CCccHHHHHHHHHhCCCCEEEEeCChhhHHHHHHhhhhhhh
Q 026543 95 LMPGASHLIRHLHAKGIPMCVATGSLARHFELKTQKHRELF 135 (237)
Q Consensus 95 ~~~~~~~~l~~l~~~g~~v~i~s~~~~~~~~~~~~~~~gl~ 135 (237)
+.+...+.+++++++|++++++|++....+. .+.+.+++.
T Consensus 17 i~~~~~~~i~~l~~~G~~~~iaTGR~~~~~~-~~~~~~~~~ 56 (256)
T TIGR00099 17 ISPSTKEALAKLREKGIKVVLATGRPYKEVK-NILKELGLD 56 (256)
T ss_pred cCHHHHHHHHHHHHCCCeEEEEeCCCHHHHH-HHHHHcCCC
Confidence 4456678889999999999999998876554 345555543
|
The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences. |
| >PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=80.70 E-value=3.3 Score=32.71 Aligned_cols=41 Identities=15% Similarity=0.174 Sum_probs=31.4
Q ss_pred CCccHHHHHHHHHhCCCCEEEEeCChhhHHHHHHhhhhhhhh
Q 026543 95 LMPGASHLIRHLHAKGIPMCVATGSLARHFELKTQKHRELFS 136 (237)
Q Consensus 95 ~~~~~~~~l~~l~~~g~~v~i~s~~~~~~~~~~~~~~~gl~~ 136 (237)
..+.+.+.|+.|+++|++++++|+.....+. .+.+.+++..
T Consensus 19 ~~~~a~~aL~~Lk~~GI~vVlaTGRt~~ev~-~l~~~Lgl~~ 59 (302)
T PRK12702 19 SYGAARQALAALERRSIPLVLYSLRTRAQLE-HLCRQLRLEH 59 (302)
T ss_pred CCHHHHHHHHHHHHCCCEEEEEcCCCHHHHH-HHHHHhCCCC
Confidence 4455778899999999999999998776655 3566667654
|
|
| >PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=80.32 E-value=2.7 Score=32.75 Aligned_cols=40 Identities=18% Similarity=0.149 Sum_probs=30.4
Q ss_pred CCccHHHHHHHHHhCCCCEEEEeCChhhHHHHHHhhhhhhh
Q 026543 95 LMPGASHLIRHLHAKGIPMCVATGSLARHFELKTQKHRELF 135 (237)
Q Consensus 95 ~~~~~~~~l~~l~~~g~~v~i~s~~~~~~~~~~~~~~~gl~ 135 (237)
+.+..++.++.++++|++++++|++...... .+++.+++.
T Consensus 20 i~~~~~~ai~~l~~~G~~~~iaTGR~~~~~~-~~~~~l~~~ 59 (272)
T PRK15126 20 LGEKTLSTLARLRERDITLTFATGRHVLEMQ-HILGALSLD 59 (272)
T ss_pred CCHHHHHHHHHHHHCCCEEEEECCCCHHHHH-HHHHHcCCC
Confidence 4555678889999999999999998777655 455656654
|
|
| >PRK10976 putative hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=80.10 E-value=2.7 Score=32.53 Aligned_cols=40 Identities=28% Similarity=0.357 Sum_probs=29.8
Q ss_pred CCccHHHHHHHHHhCCCCEEEEeCChhhHHHHHHhhhhhhh
Q 026543 95 LMPGASHLIRHLHAKGIPMCVATGSLARHFELKTQKHRELF 135 (237)
Q Consensus 95 ~~~~~~~~l~~l~~~g~~v~i~s~~~~~~~~~~~~~~~gl~ 135 (237)
+.+...+.++.++++|++++++|++...... .+.+.+++.
T Consensus 20 is~~~~~ai~~l~~~G~~~~iaTGR~~~~~~-~~~~~l~~~ 59 (266)
T PRK10976 20 LSPYAKETLKLLTARGIHFVFATGRHHVDVG-QIRDNLEIK 59 (266)
T ss_pred CCHHHHHHHHHHHHCCCEEEEEcCCChHHHH-HHHHhcCCC
Confidence 4455678889999999999999998776654 355555654
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 237 | ||||
| 3l5k_A | 250 | The Crystal Structure Of Human Haloacid Dehalogenas | 4e-60 | ||
| 3kbb_A | 216 | Crystal Structure Of Putative Beta-Phosphoglucomuta | 7e-16 | ||
| 3quq_A | 243 | Crystal Structure Of Pyrophosphatase From Bacteroid | 4e-13 | ||
| 3qyp_A | 243 | Crystal Structure Of Pyrophosphatase From Bacteroid | 5e-13 | ||
| 3qub_A | 243 | Crystal Structure Of Pyrophosphatase From Bacteroid | 7e-13 | ||
| 3r9k_A | 243 | Crystal Structure Of Pyrophosphatase From Bacteroid | 7e-13 | ||
| 3qu5_A | 243 | Crystal Structure Of Pyrophosphatase From Bacteroid | 1e-12 | ||
| 3qut_A | 243 | Crystal Structure Of Pyrophosphatase From Bacteroid | 1e-12 | ||
| 3qu4_A | 243 | Crystal Structure Of Pyrophosphatase From Bacteroid | 4e-12 | ||
| 3s6j_A | 233 | The Crystal Structure Of A Hydrolase From Pseudomon | 6e-10 | ||
| 3nas_A | 233 | The Crystal Structure Of Beta-Phosphoglucomutase Fr | 8e-10 | ||
| 4g9b_A | 243 | Crystal Structure Of Beta-Phosphoglucomutase Homolo | 2e-09 | ||
| 3e58_A | 214 | Crystal Structure Of Putative Beta-Phosphoglucomuta | 7e-09 | ||
| 1o03_A | 221 | Structure Of Pentavalent Phosphorous Intermediate O | 2e-08 | ||
| 3dv9_A | 247 | Putative Beta-Phosphoglucomutase From Bacteroides V | 7e-08 | ||
| 3fm9_A | 221 | Analysis Of The Structural Determinants Underlying | 1e-07 | ||
| 1lvh_A | 221 | The Structure Of Phosphorylated Beta-phosphoglucomu | 2e-07 | ||
| 4eek_A | 259 | Crystal Structure Of Had Family Hydrolase Dr_1622 F | 5e-07 | ||
| 2fdr_A | 229 | Crystal Structure Of Conserved Haloacid Dehalogenas | 1e-05 | ||
| 4gib_A | 250 | 2.27 Angstrom Crystal Structure Of Beta-Phosphogluc | 1e-05 | ||
| 2hdo_A | 209 | Crystal Structure Of Putative Phosphoglycolate Phos | 6e-04 |
| >pdb|3L5K|A Chain A, The Crystal Structure Of Human Haloacid Dehalogenase-Like Hydrolase Domain Containing 1a (Hdhd1a) Length = 250 | Back alignment and structure |
|
| >pdb|3KBB|A Chain A, Crystal Structure Of Putative Beta-Phosphoglucomutase From Thermotoga Maritima Length = 216 | Back alignment and structure |
|
| >pdb|3QUQ|A Chain A, Crystal Structure Of Pyrophosphatase From Bacteroides Thetaiotaomicron, An Open Cap Conformation Length = 243 | Back alignment and structure |
|
| >pdb|3QYP|A Chain A, Crystal Structure Of Pyrophosphatase From Bacteroides Thetaiotaomicron, Glu47asn Mutant Complexed With Calcium And Phosphate Length = 243 | Back alignment and structure |
|
| >pdb|3QUB|A Chain A, Crystal Structure Of Pyrophosphatase From Bacteroides Thetaiotaomicron, Glu47ala Mutant Complexed With Sulfate Length = 243 | Back alignment and structure |
|
| >pdb|3R9K|A Chain A, Crystal Structure Of Pyrophosphatase From Bacteroides Thetaiotaomicron, Glu47asp Mutant Complexed With Sulfate, A Closed Cap Conformation Length = 243 | Back alignment and structure |
|
| >pdb|3QU5|A Chain A, Crystal Structure Of Pyrophosphatase From Bacteroides Thetaiotaomicron, Asp11asn Mutant Length = 243 | Back alignment and structure |
|
| >pdb|3QUT|A Chain A, Crystal Structure Of Pyrophosphatase From Bacteroides Thetaiotaomicron, Asp13asn Mutant, An Open Cap Conformation Length = 243 | Back alignment and structure |
|
| >pdb|3QU4|A Chain A, Crystal Structure Of Pyrophosphatase From Bacteroides Thetaiotaomicron, Asp13ala Mutant Length = 243 | Back alignment and structure |
|
| >pdb|3S6J|A Chain A, The Crystal Structure Of A Hydrolase From Pseudomonas Syringae Length = 233 | Back alignment and structure |
|
| >pdb|3NAS|A Chain A, The Crystal Structure Of Beta-Phosphoglucomutase From Bacillus Subtilis Length = 233 | Back alignment and structure |
|
| >pdb|4G9B|A Chain A, Crystal Structure Of Beta-Phosphoglucomutase Homolog From Escherichia Coli, Target Efi-501172, With Bound Mg, Open Lid Length = 243 | Back alignment and structure |
|
| >pdb|3E58|A Chain A, Crystal Structure Of Putative Beta-Phosphoglucomutase From Streptococcus Thermophilus Length = 214 | Back alignment and structure |
|
| >pdb|1O03|A Chain A, Structure Of Pentavalent Phosphorous Intermediate Of An Enzyme Catalyzed Phosphoryl Transfer Reaction Observed On Cocrystallization With Glucose 6-Phosphate Length = 221 | Back alignment and structure |
|
| >pdb|3DV9|A Chain A, Putative Beta-Phosphoglucomutase From Bacteroides Vulgatus Length = 247 | Back alignment and structure |
|
| >pdb|3FM9|A Chain A, Analysis Of The Structural Determinants Underlying Discrimination Between Substrate And Solvent In Beta- Phosphoglucomutase Catalysis Length = 221 | Back alignment and structure |
|
| >pdb|1LVH|A Chain A, The Structure Of Phosphorylated Beta-phosphoglucomutase From Lactoccocus Lactis To 2.3 Angstrom Resolution Length = 221 | Back alignment and structure |
|
| >pdb|4EEK|A Chain A, Crystal Structure Of Had Family Hydrolase Dr_1622 From Deinococcus Radiodurans R1 (Target Efi-501256) With Bound Phosphate And Sodium Length = 259 | Back alignment and structure |
|
| >pdb|2FDR|A Chain A, Crystal Structure Of Conserved Haloacid Dehalogenase-like Protein Of Unknown Function Atu0790 From Agrobacterium Tumefaciens Str. C58 Length = 229 | Back alignment and structure |
|
| >pdb|4GIB|A Chain A, 2.27 Angstrom Crystal Structure Of Beta-Phosphoglucomutase (Pgmb) From Clostridium Difficile Length = 250 | Back alignment and structure |
|
| >pdb|2HDO|A Chain A, Crystal Structure Of Putative Phosphoglycolate Phosphatase (Np_784602.1) From Lactobacillus Plantarum At 1.50 A Resolution Length = 209 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >3l5k_A Protein GS1, haloacid dehalogenase-like hydrolase domain- containing protein 1A; HDHD1A, haloacid dehalogenase-like hydrolase domain containing 1A; 2.00A {Homo sapiens} Length = 250 | Back alignment and structure |
|---|
Score = 295 bits (757), Expect = e-102
Identities = 117/233 (50%), Positives = 158/233 (67%), Gaps = 5/233 (2%)
Query: 1 MAAVSSKKPITHVIFDMDGLLLDTEKFYTEVQELILARYNKTFDWSLKAKMMGKKAIEAA 60
MAA +P+TH+IFDMDGLLLDTE+ Y+ V + I RY+K + W +K+ +MGKKA+EAA
Sbjct: 23 MAA--PPQPVTHLIFDMDGLLLDTERLYSVVFQEICNRYDKKYSWDVKSLVMGKKALEAA 80
Query: 61 QVFVEETGISDKLSAEDFLVQREETLQTLFPTSELMPGASHLIRHLHAKGIPMCVATGSL 120
Q+ ++ + +S E+ + + + L+ +FPT+ LMPGA LI HL GIP +AT S
Sbjct: 81 QIIIDVLQLP--MSKEELVEESQTKLKEVFPTAALMPGAEKLIIHLRKHGIPFALATSSR 138
Query: 121 ARHFELKTQKHRELFSLMHHVVRGDDPEVKQGKPSPDIFLAAAKRFEGGPIDSQEILVFE 180
+ F++KT +H+E FSL H+V GDDPEV+ GKP PDIFLA AKRF P ++ LVFE
Sbjct: 139 SASFDMKTSRHKEFFSLFSHIVLGDDPEVQHGKPDPDIFLACAKRF-SPPPAMEKCLVFE 197
Query: 181 DAPSGVLAAKNAGMSVVMVPDPRLDSSYHSNADQLLSSLLGFNPKDWGLPPFE 233
DAP+GV AA AGM VVMVPD L + A +L+SL F P+ +GLP +E
Sbjct: 198 DAPNGVEAALAAGMQVVMVPDGNLSRDLTTKATLVLNSLQDFQPELFGLPSYE 250
|
| >3dv9_A Beta-phosphoglucomutase; structural genomics, APC60149, PSI- protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.72A {Bacteroides vulgatus} Length = 247 | Back alignment and structure |
|---|
Score = 199 bits (508), Expect = 3e-64
Identities = 57/222 (25%), Positives = 91/222 (40%), Gaps = 9/222 (4%)
Query: 9 PITHVIFDMDGLLLDTEKFYTEVQELILARYNKTFDWSLKAKMMGKKAIEAAQVFVEETG 68
+ V+FDMDG+L D+ + E I+ R+ G+ +
Sbjct: 22 DLKAVLFDMDGVLFDSMPNHAESWHKIMKRFGFGLSREEAYMHEGRTGASTINIVSRRER 81
Query: 69 ISDKLSAE-DFLVQREETLQTLFPTSELMPGASHLIRHLHAKGIPMCVATGSLARHFELK 127
D E + Q + P +E MPGA ++ + ++G+ V TGS +
Sbjct: 82 GHDATEEEIKAIYQAKTEEFNKCPKAERMPGALEVLTKIKSEGLTPMVVTGSGQTSLLDR 141
Query: 128 TQKHRELFSLMHHVVRGDDPEVKQGKPSPDIFLAAAKRFEGGPIDSQEILVFEDAPSGVL 187
+ + +V D VK GKP+P+ +L A K+ E LV E+AP GV
Sbjct: 142 LNHNFPGIFQANLMVTAFD--VKYGKPNPEPYLMALKKGG---FKPNEALVIENAPLGVQ 196
Query: 188 AAKNAGMSVVMVPDPRL--DSSYHSNADQLLSSLLGFNPKDW 227
A AG+ + V L + + A+ L S+ FN K+W
Sbjct: 197 AGVAAGIFTIAVNTGPLHDNVLLNEGANLLFHSMPDFN-KNW 237
|
| >3qxg_A Inorganic pyrophosphatase; hydrolase, magnesium binding site, NEW YORK research center for structural genomics; HET: TLA; 1.24A {Bacteroides thetaiotaomicron} PDB: 3qu2_A* 3qx7_A 3quq_A* 3r9k_A 3qut_A 3qu9_A* 3qu7_A 3qu5_A 3qyp_A 3quc_A 3qub_A 3qu4_A Length = 243 | Back alignment and structure |
|---|
Score = 196 bits (500), Expect = 3e-63
Identities = 52/216 (24%), Positives = 95/216 (43%), Gaps = 8/216 (3%)
Query: 7 KKPITHVIFDMDGLLLDTEKFYTEVQELILARYNKTFDWSLKAKMMGKKAIEAAQVFVEE 66
+K + V+FDMDG+L ++ +++E ++ + G+ + +
Sbjct: 21 RKKLKAVLFDMDGVLFNSMPYHSEAWHQVMKTHGLDLSREEAYMHEGRTGASTINIVFQR 80
Query: 67 TGISDKLSAE-DFLVQREETLQTLFPTSELMPGASHLIRHLHAKGIPMCVATGSLARHFE 125
+ E + + + L +P +E MPGA L++ + ++G+ V TGS
Sbjct: 81 ELGKEATQEEIESIYHEKSILFNSYPEAERMPGAWELLQKVKSEGLTPMVVTGSGQLSLL 140
Query: 126 LKTQKHRELFSLMHHVVRGDDPEVKQGKPSPDIFLAAAKRFEGGPIDSQEILVFEDAPSG 185
+ + + +V D VK GKP+P+ +L A K+ + + E +V E+AP G
Sbjct: 141 ERLEHNFPGMFHKELMVTAFD--VKYGKPNPEPYLMALKKGG---LKADEAVVIENAPLG 195
Query: 186 VLAAKNAGMSVVMVPDPRLDSS--YHSNADQLLSSL 219
V A AG+ + V LD + AD L S+
Sbjct: 196 VEAGHKAGIFTIAVNTGPLDGQVLLDAGADLLFPSM 231
|
| >3e58_A Putative beta-phosphoglucomutase; structu genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.86A {Streptococcus thermophilus lmg 18311} Length = 214 | Back alignment and structure |
|---|
Score = 190 bits (485), Expect = 3e-61
Identities = 47/214 (21%), Positives = 92/214 (42%), Gaps = 7/214 (3%)
Query: 6 SKKPITHVIFDMDGLLLDTEKFYTEVQELILARYNKTFDWSLKAKMMGKKAIEAAQVFVE 65
S + +IFDMDG+L DTEK+Y + + L + + D + +G + + +
Sbjct: 1 SNAMVEAIIFDMDGVLFDTEKYYYDRRASFLGQKGISIDHLPPSFFIGGNTKQVWENILR 60
Query: 66 ETGISDKLSAEDFLVQREETLQTLFPTSELMPGASHLIRHLHAKGIPMCVATGSLARHFE 125
+ +S + L + P ++ + ++G+ + +A+ S+
Sbjct: 61 DEYDKWDVSTLQEEYNTYKQNNPLPYKELIFPDVLKVLNEVKSQGLEIGLASSSVKADIF 120
Query: 126 LKTQKHRELFSLMHHVVRGDDPEVKQGKPSPDIFLAAAKRFEGGPIDSQEILVFEDAPSG 185
+++ L V+ G++ K+ KP+P+I+L A K+ + + L+ ED+ G
Sbjct: 121 RALEEN-RLQGFFDIVLSGEE--FKESKPNPEIYLTALKQLN---VQASRALIIEDSEKG 174
Query: 186 VLAAKNAGMSVVMVPDPRLDSSYHSNADQLLSSL 219
+ A A + V + D S A LL SL
Sbjct: 175 IAAGVAADVEVWAIRDNEFGMDQ-SAAKGLLDSL 207
|
| >1te2_A Putative phosphatase; structural genomics, phosphates, PSI, protein S initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.76A {Escherichia coli} SCOP: c.108.1.6 Length = 226 | Back alignment and structure |
|---|
Score = 181 bits (462), Expect = 1e-57
Identities = 47/224 (20%), Positives = 88/224 (39%), Gaps = 8/224 (3%)
Query: 5 SSKKPITHVIFDMDGLLLDTEKFYTEVQELILARYNKTFD-WSLKAKMMGKKAIEAAQVF 63
S+ + I IFDMDGLL+D+E + + ++A + +G + ++
Sbjct: 4 STPRQILAAIFDMDGLLIDSEPLWDRAELDVMASLGVDISRRNELPDTLGLRIDMVVDLW 63
Query: 64 VEETGISDKLSAEDFLVQREETLQTLFPTSELMPGASHLIRHLHAKGIPMCVATGSLARH 123
+ E + + T L+PG + +G+ + +A+ S
Sbjct: 64 YARQPWNGPSRQEVVERVIARAISLVEETRPLLPGVREAVALCKEQGLLVGLASASPLHM 123
Query: 124 FELKTQKHRELFSLMHHVVRGDDPEVKQGKPSPDIFLAAAKRFEGGPIDSQEILVFEDAP 183
E +L + + + KP P ++L A + +D + ED+
Sbjct: 124 LEKVLTMF-DLRDSFDALASAEK--LPYSKPHPQVYLDCAAKLG---VDPLTCVALEDSV 177
Query: 184 SGVLAAKNAGMSVVMVPDPR-LDSSYHSNADQLLSSLLGFNPKD 226
+G++A+K A M ++VP P + A+ LSSL KD
Sbjct: 178 NGMIASKAARMRSIVVPAPEAQNDPRFVLANVKLSSLTELTAKD 221
|
| >3nas_A Beta-PGM, beta-phosphoglucomutase; PSI, structural genomics, protein structure initiative, NEW research center for structural genomics; 3.00A {Bacillus subtilis} Length = 233 | Back alignment and structure |
|---|
Score = 177 bits (450), Expect = 1e-55
Identities = 51/223 (22%), Positives = 94/223 (42%), Gaps = 18/223 (8%)
Query: 10 ITHVIFDMDGLLLDTEKFYTEVQELILARYNKTFDWSLKAKMMGKKAIEAAQVFVEETGI 69
+ VIFD+DG++ DT +++ + I + + FD + ++ G E+ + + G
Sbjct: 2 LKAVIFDLDGVITDTAEYHFLAWKHIAEQIDIPFDRDMNERLKGISREESLESILIFGGA 61
Query: 70 SDKLSAED---FLVQREETLQTLFPT---SELMPGASHLIRHLHAKGIPMCVATGSLARH 123
K + + + ++ Q L +L+PG L+ L + I + +A+ S
Sbjct: 62 ETKYTNAEKQELMHRKNRDYQMLISKLTPEDLLPGIGRLLCQLKNENIKIGLASSSRNAP 121
Query: 124 FELKTQKHRELFSLMHHVVRGDDPEVKQGKPSPDIFLAAAKRFEGGPIDSQEILVFEDAP 183
L + + H +V + +GKP PDIFL AA + + + EDA
Sbjct: 122 KIL---RRLAIIDDFHAIVDPTT--LAKGKPDPDIFLTAAAMLD---VSPADCAAIEDAE 173
Query: 184 SGVLAAKNAGMSVVMVPDPRLDSSYHSNADQLLSSLLGFNPKD 226
+G+ A K+AGM V V + AD ++ +
Sbjct: 174 AGISAIKSAGMFAVGVGQGQ----PMLGADLVVRQTSDLTLEL 212
|
| >4g9b_A Beta-PGM, beta-phosphoglucomutase; HAD, putative phosphoglucomutase, enzyme function initiative structural genomics, isomerase; 1.70A {Escherichia coli} Length = 243 | Back alignment and structure |
|---|
Score = 174 bits (444), Expect = 1e-54
Identities = 49/218 (22%), Positives = 86/218 (39%), Gaps = 20/218 (9%)
Query: 8 KPITHVIFDMDGLLLDTEKFYTEVQELILARYNKTFDWSLKAKMMGKKAIEAAQVFVEET 67
+ VIFD+DG++ DT + + + I A + D + G E+ + ++
Sbjct: 3 MKLQGVIFDLDGVITDTAHLHFQAWQQIAAEIGISIDAQFNESLKGISRDESLRRILQHG 62
Query: 68 GISDKLSAEDF---LVQREETLQTLF---PTSELMPGASHLIRHLHAKGIPMCVATGSLA 121
G ++++ ++ + ++PG L+ L A+ I + +A+ SL
Sbjct: 63 GKEGDFNSQERAQLAYRKNLLYVHSLRELTVNAVLPGIRSLLADLRAQQISVGLASVSLN 122
Query: 122 RHFELKTQKHRELFSLMHHVVRGDDPEVKQGKPSPDIFLAAAKRFEGGPIDSQEILVFED 181
L + RE F +K KP P+IFLAA + Q + ED
Sbjct: 123 APTILAALELREFF---TFCADASQ--LKNSKPDPEIFLAACAGLG---VPPQACIGIED 174
Query: 182 APSGVLAAKNAGMSVVMVPDPRLDSSYHSNADQLLSSL 219
A +G+ A +GM V + + A LL S
Sbjct: 175 AQAGIDAINASGMRSVGIGAG------LTGAQLLLPST 206
|
| >2wf7_A Beta-PGM, beta-phosphoglucomutase; transition state analogue, haloacid dehalogenase superfamily, isomerase, phosphotransferase; HET: G7P; 1.05A {Lactococcus lactis} PDB: 1o03_A* 1z4n_A* 1z4o_A* 1zol_A 2wf5_A* 2wf6_A* 1o08_A* 2wf8_A* 2wf9_A* 2wfa_A 2whe_A 1lvh_A* 3fm9_A Length = 221 | Back alignment and structure |
|---|
Score = 169 bits (431), Expect = 5e-53
Identities = 48/222 (21%), Positives = 96/222 (43%), Gaps = 23/222 (10%)
Query: 13 VIFDMDGLLLDTEKFYTEVQELILARYNKT-FDWSLKAKMMGKKAIEAAQVFVEETGISD 71
V+FD+DG++ DT +++ + + D ++ G ++ Q ++
Sbjct: 5 VLFDLDGVITDTAEYHFRAWKALAEEIGINGVDRQFNEQLKGVSREDSLQKILDLADK-- 62
Query: 72 KLSAEDF--LVQR-----EETLQTLFPTSELMPGASHLIRHLHAKGIPMCVATGSLARHF 124
K+SAE+F L +R + +Q + P +++ PG L++ L + I + +A+ S F
Sbjct: 63 KVSAEEFKELAKRKNDNYVKMIQDVSP-ADVYPGILQLLKDLRSNKIKIALASASKNGPF 121
Query: 125 ELKTQKHRELFSLMHHVVRGDDPEVKQGKPSPDIFLAAAKRFEGGPIDSQEILVFEDAPS 184
L+ F + + V KP+PDIF+AAA + E + ED+ +
Sbjct: 122 LLERMNLTGYF---DAIADPAE--VAASKPAPDIFIAAAHAVG---VAPSESIGLEDSQA 173
Query: 185 GVLAAKNAGMSVVMVPDPRLDSSYHSNADQLLSSLLGFNPKD 226
G+ A K++G + V P + ++ + +
Sbjct: 174 GIQAIKDSGALPIGVGRP----EDLGDDIVIVPDTSHYTLEF 211
|
| >2fdr_A Conserved hypothetical protein; SAD, structural genomics, agrobacter tumefaciens, HAD-superfamily hydrolase; 2.00A {Agrobacterium tumefaciens str} SCOP: c.108.1.6 Length = 229 | Back alignment and structure |
|---|
Score = 165 bits (419), Expect = 3e-51
Identities = 47/221 (21%), Positives = 83/221 (37%), Gaps = 19/221 (8%)
Query: 8 KPITHVIFDMDGLLLDTEKFYTEVQELILARYNKTFD-WSLKAKMMGKKAIEAAQVFVEE 66
+IFD DG+L+D+E +V+ +L + + G E
Sbjct: 2 SGFDLIIFDCDGVLVDSEIIAAQVESRLLTEAGYPISVEEMGERFAGMTWKNILLQVESE 61
Query: 67 TGISDKLSAEDFLVQREETLQTLFPTSELMPGASHLIRHLHAKGIPMCVATGSLARHFEL 126
I LSA + L +++ G + L P C+ + S + ++
Sbjct: 62 ASIP--LSASLLDKSEKLLDMRLERDVKIIDGVKFALSRL---TTPRCICSNSSSHRLDM 116
Query: 127 KTQKH--RELFSLMHHVVRGDDPEVKQGKPSPDIFLAAAKRFEGGPIDSQEILVFEDAPS 184
K + F+ H+ D + KP PDIFL A +F + ++V ED+
Sbjct: 117 MLTKVGLKPYFA--PHIYSAKDLGADRVKPKPDIFLHGAAQFG---VSPDRVVVVEDSVH 171
Query: 185 GVLAAKNAGMSVVMVPDPRLDSSYH------SNADQLLSSL 219
G+ A+ AGM V+ H + A+ ++S +
Sbjct: 172 GIHGARAAGMRVIGFTGASHTYPSHADRLTDAGAETVISRM 212
|
| >4eek_A Beta-phosphoglucomutase-related protein; hydrolase, magnesium binding site, enzyme function initiativ; 1.60A {Deinococcus radiodurans} PDB: 4eel_A* 4een_A Length = 259 | Back alignment and structure |
|---|
Score = 162 bits (413), Expect = 8e-50
Identities = 48/221 (21%), Positives = 87/221 (39%), Gaps = 14/221 (6%)
Query: 6 SKKPITHVIFDMDGLLLDTEKFYTEVQELILARYNKTFDWS-LKAKMMGKKAIEAAQVFV 64
P V+FD+DG+L+++E +V + +LA D + + G++
Sbjct: 24 PDAPFDAVLFDLDGVLVESEGIIAQVWQSVLAERGLHLDLTEIAMYFTGQRFDGVLAYLA 83
Query: 65 EETGISDKLSAEDFLVQREETLQTLFPTSELMPGASHLIRHLHAKGIPMCVATGSLARHF 124
++ DFL E + GA+ +R L A G+P + + S
Sbjct: 84 QQHDFVP---PPDFLDVLETRFNAAMTGVTAIEGAAETLRALRAAGVPFAIGSNSERGRL 140
Query: 125 ELKTQKHRELFSLMHHVVRGDDPEVKQGKPSPDIFLAAAKRFEGGPIDSQEILVFEDAPS 184
LK + L L + +GKP PD++ AA++ I + +V ED+ +
Sbjct: 141 HLKLRVAG-LTELAGEHIYDPSWVGGRGKPHPDLYTFAAQQLG---ILPERCVVIEDSVT 196
Query: 185 GVLAAKNAGMSVVMVPDPRLDSSYHSN------ADQLLSSL 219
G A AG ++ + P + A ++L+S
Sbjct: 197 GGAAGLAAGATLWGLLVPGHPHPDGAAALSRLGAARVLTSH 237
|
| >3s6j_A Hydrolase, haloacid dehalogenase-like family; structural genomics, PSI-2; 2.20A {Pseudomonas syringae PV} Length = 233 | Back alignment and structure |
|---|
Score = 153 bits (388), Expect = 2e-46
Identities = 55/217 (25%), Positives = 85/217 (39%), Gaps = 9/217 (4%)
Query: 6 SKKPITHVIFDMDGLLLDTEKFYTEVQELILARYNKTFDWSLKAKMMGKKAIEAAQVFVE 65
S +P T IFD+DG L D+ + L N + +G +
Sbjct: 2 SLRPQTSFIFDLDGTLTDSVYQNVAAWKEALDAENIPLAMWRIHRKIGMSGGLMLKSLSR 61
Query: 66 ETGIS-DKLSAEDFLVQREETLQTLFPTSELMPGASHLIRHLHAKGIPMCVATGSLARHF 124
ETG+S AE + + + L +PGA L+ L + + C+AT
Sbjct: 62 ETGMSITDEQAERLSEKHAQAYERLQHQIIALPGAVELLETLDKENLKWCIATSGGIDTA 121
Query: 125 ELKTQKHRELFSLMHHVVRGDDPEVKQGKPSPDIFLAAAKRFEGGPIDSQEILVFEDAPS 184
+ + +L ++V DD V GKP PD+FLAAAK+ E LV DA
Sbjct: 122 TINLKAL-KLDINKINIVTRDD--VSYGKPDPDLFLAAAKKIGAPI---DECLVIGDAIW 175
Query: 185 GVLAAKNAGMSVVMVPDPRLDSS--YHSNADQLLSSL 219
+LAA+ + V + D + A ++
Sbjct: 176 DMLAARRCKATGVGLLSGGYDIGELERAGALRVYEDP 212
|
| >2qlt_A (DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, saccharom cerevisiae, structural genomics, PSI-2, protein structure initiative; 1.60A {Saccharomyces cerevisiae} Length = 275 | Back alignment and structure |
|---|
Score = 154 bits (391), Expect = 2e-46
Identities = 45/233 (19%), Positives = 80/233 (34%), Gaps = 15/233 (6%)
Query: 1 MAAVSSKKPITHVIFDMDGLLLDTEKFYTEVQELILARYNKTFDWSLKAKMMGKKAIEAA 60
+ I +FD+DG ++ ++ + G + +A
Sbjct: 26 LTTKPLSLKINAALFDVDGTIIISQPAIAAFWRDFGKDKPYFDAEHVIHISHGWRTYDAI 85
Query: 61 QVFVEETGISDKLSAEDFLVQREETLQTLFPTSELMPGASHLIRHLHAKGI-PMCVATGS 119
F + +D+ + E +PGA L L+A VAT
Sbjct: 86 AKFAPD--FADEEYVNKLEGEIPEKYGEHSI---EVPGAVKLCNALNALPKEKWAVATSG 140
Query: 120 LARHFELKTQKHRELFSLMHHVVRGDDPEVKQGKPSPDIFLAAAKRF----EGGPIDSQE 175
R K ++ + + +D VKQGKP P+ +L +
Sbjct: 141 -TRDMAKKWFDILKIK-RPEYFITAND--VKQGKPHPEPYLKGRNGLGFPINEQDPSKSK 196
Query: 176 ILVFEDAPSGVLAAKNAGMSVVMVPDP-RLDSSYHSNADQLLSSLLGFNPKDW 227
++VFEDAP+G+ A K AG +V + LD D ++ + ++
Sbjct: 197 VVVFEDAPAGIAAGKAAGCKIVGIATTFDLDFLKEKGCDIIVKNHESIRVGEY 249
|
| >3iru_A Phoshonoacetaldehyde hydrolase like protein; phosphonoacetaldehyde hydrolase like P structural genomics, PSI-2, protein structure initiative; 2.30A {Oleispira antarctica} Length = 277 | Back alignment and structure |
|---|
Score = 133 bits (337), Expect = 2e-38
Identities = 41/210 (19%), Positives = 72/210 (34%), Gaps = 17/210 (8%)
Query: 6 SKKPITHVIFDMDGLLLDTEKF-YTEVQELILARYNKTFDWSLKAKMMGKKAIEAAQVFV 64
P+ +I D G +D + + + + MG + E + +
Sbjct: 10 CAGPVEALILDWAGTTIDFGSLAPVYAFMELFKQEGIEVTQAEAREPMGTEKSEHIRRML 69
Query: 65 EETGISDKLSAEDFLVQREETLQTLF------------PTSELMPGASHLIRHLHAKGIP 112
+ I++ + EE ++ L+ S+L+PG + L A+GI
Sbjct: 70 GNSRIANAWLSIKGQASNEEDIKRLYDLFAPIQTRIVAQRSQLIPGWKEVFDKLIAQGIK 129
Query: 113 MCVATGSLARHFELKTQKHRELFSLMHHVVRGDDPEVKQGKPSPDIFLAAAKRFEGGPID 172
+ TG +E V D V +G+P PD+ L A E G ++
Sbjct: 130 VGGNTGYGPGMMAPALIAAKEQGYTPASTVFATD--VVRGRPFPDMALKVALELEVGHVN 187
Query: 173 SQEILVFEDAPSGVLAAKNAGMSVVMVPDP 202
+ +D G+ AGM V V
Sbjct: 188 --GCIKVDDTLPGIEEGLRAGMWTVGVSCS 215
|
| >1swv_A Phosphonoacetaldehyde hydrolase; HAD enzyme superfamily, phosphonotase, metal binding; 2.30A {Bacillus cereus} SCOP: c.108.1.3 PDB: 1sww_A 2iof_A* 2ioh_A 1rql_A 1rqn_A 2iof_K* 1rdf_A 1fez_A Length = 267 | Back alignment and structure |
|---|
Score = 111 bits (278), Expect = 8e-30
Identities = 45/207 (21%), Positives = 72/207 (34%), Gaps = 17/207 (8%)
Query: 6 SKKPITHVIFDMDGLLLDTEKF-YTEVQELILARYNKTFDWSLKAKMMGKKAIEAAQVFV 64
+ I VIF G +D F EV I + K MG I+ +
Sbjct: 2 DRMKIEAVIFAWAGTTVDYGCFAPLEVFMEIFHKRGVAITAEEARKPMGLLKIDHVRALT 61
Query: 65 EETGISDKLSA--------EDFLVQREETLQTLF----PTSELMPGASHLIRHLHAKGIP 112
E I+ + + D EE + LF + + G +I L +GI
Sbjct: 62 EMPRIASEWNRVFRQLPTEADIQEMYEEFEEILFAILPRYASPINGVKEVIASLRERGIK 121
Query: 113 MCVATGSLARHFELKTQKHRELFSLMHHVVRGDDPEVKQGKPSPDIFLAAAKRFEGGPID 172
+ TG ++ ++ +V DD V G+P P + A P++
Sbjct: 122 IGSTTGYTREMMDIVAKEAALQGYKPDFLVTPDD--VPAGRPYPWMCYKNAMELGVYPMN 179
Query: 173 SQEILVFEDAPSGVLAAKNAGMSVVMV 199
++ D S + +NAGM V V
Sbjct: 180 --HMIKVGDTVSDMKEGRNAGMWTVGV 204
|
| >2fi1_A Hydrolase, haloacid dehalogenase-like family; structural genomics, haloacid dehalogenase-like F PSI, protein structure initiative; 1.40A {Streptococcus pneumoniae} SCOP: c.108.1.3 Length = 190 | Back alignment and structure |
|---|
Score = 91.1 bits (227), Expect = 5e-23
Identities = 37/192 (19%), Positives = 65/192 (33%), Gaps = 17/192 (8%)
Query: 9 PITHVIFDMDGLLLDTEKFYTEVQELILARYNKTFDWSLKAKMMGKKAIEAAQVFVEETG 68
I+D+ G LLD + T LA Y T D + + A + F
Sbjct: 5 KYHDYIWDLGGTLLDNYETSTAAFVETLALYGITQDHDSVYQALKVSTPFAIETFAPN-- 62
Query: 69 ISDKLSAEDFLVQREETLQTLFPTSELMPGASHLIRHLHAKGIPMCVATGSLARHFELKT 128
E+FL + +E L G S L+ + +G + + L+
Sbjct: 63 ------LENFLEKYKENEARELEHPILFEGVSDLLEDISNQGGRHFLVSHR--NDQVLEI 114
Query: 129 QKHRELFSLMHHVVRGDDPEVKQGKPSPDIFLAAAKRFEGGPIDSQEILVFEDAPSGVLA 188
+ + + VV + KP+P+ L +++ LV D P + A
Sbjct: 115 LEKTSIAAYFTEVVTSSS--GFKRKPNPESMLYLREKY-----QISSGLVIGDRPIDIEA 167
Query: 189 AKNAGMSVVMVP 200
+ AG+ +
Sbjct: 168 GQAAGLDTHLFT 179
|
| >3kzx_A HAD-superfamily hydrolase, subfamily IA, variant; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ehrlich chaffeensis; 1.90A {Ehrlichia chaffeensis} Length = 231 | Back alignment and structure |
|---|
Score = 91.2 bits (227), Expect = 1e-22
Identities = 41/220 (18%), Positives = 70/220 (31%), Gaps = 24/220 (10%)
Query: 8 KPITHVIFDMDGLLLDTEKFYTEVQELILARYNKTFDWSLKAKMMGKKAIEAAQVF---- 63
K T VIFD L+DT + + + MG K I+ +
Sbjct: 23 KQPTAVIFDWYNTLIDT------SINIDRTTFYQVL------DQMGYKNIDLDSIPNSTI 70
Query: 64 VEETGISDKLSAEDFLVQREETLQT--LFPTSELMPGASHLIRHLHAKGIPMCVATGSLA 121
+ ++ + E +L+ L GA L+ L I M + +
Sbjct: 71 PKYLITLLGKRWKEATILYENSLEKSQKSDNFMLNDGAIELLDTLKENNITMAIVSNK-N 129
Query: 122 RHFELKTQKHRELFSLMHHVVRGDDPEVKQGKPSPDIFLAAAKRFEGGPIDSQEILVFED 181
H+ L ++ D KPSP+ LAA P S+E+ D
Sbjct: 130 GERLRSEIHHKNLTHYFDSIIGSGD--TGTIKPSPEPVLAALTNINIEP--SKEVFFIGD 185
Query: 182 APSGVLAAKNAGMSVVMVPDPRLDSSYHS-NADQLLSSLL 220
+ S + +A AG + + S + + +
Sbjct: 186 SISDIQSAIEAGCLPIKYGSTNIIKDILSFKNFYDIRNFI 225
|
| >3m9l_A Hydrolase, haloacid dehalogenase-like family; HAD family hydrolase, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Pseudomonas fluorescens} PDB: 2ybd_A* 3r09_A* Length = 205 | Back alignment and structure |
|---|
Score = 84.2 bits (209), Expect = 3e-20
Identities = 39/197 (19%), Positives = 68/197 (34%), Gaps = 29/197 (14%)
Query: 6 SKKPITHVIFDMDGLLLDTEKFYTEVQELILARYNKTFDWSLKAKMMGKKAIEAAQVFVE 65
S I H +FDMDG L V + R + + A + +
Sbjct: 2 SLSEIKHWVFDMDGTLTIA------VHDFAAIR-----------EALSIPAEDDILTHLA 44
Query: 66 ETGISDKLSAEDFLVQREETLQTLFPTSELMPGASHLIRHLHAKGIPMCVATGSLARHFE 125
+ + +L++ E L S PGA L+R L +G + + T +
Sbjct: 45 ALPADESAAKHAWLLEHERDLAQG---SRPAPGAVELVRELAGRGYRLGILTRNARELAH 101
Query: 126 LKTQKH--RELFSLMHHVVRGDDPEVKQGKPSPDIFLAAAKRFEGGPIDSQEILVFEDAP 183
+ + + F+ V G D KP P L A+ ++ P +++ D
Sbjct: 102 VTLEAIGLADCFAEA--DVLGRD--EAPPKPHPGGLLKLAEAWDVSP---SRMVMVGDYR 154
Query: 184 SGVLAAKNAGMSVVMVP 200
+ + AG V+V
Sbjct: 155 FDLDCGRAAGTRTVLVN 171
|
| >3cnh_A Hydrolase family protein; NP_295428.1, predicted hydrolase of haloacid dehalogenase-LI superfamily; HET: MSE PG4; 1.66A {Deinococcus radiodurans R1} Length = 200 | Back alignment and structure |
|---|
Score = 83.6 bits (207), Expect = 4e-20
Identities = 31/196 (15%), Positives = 66/196 (33%), Gaps = 11/196 (5%)
Query: 8 KPITHVIFDMDGLLLDTEKFYTEVQELILARYNKTFDWSLKAKMMGKKAIEAAQVFVEET 67
I + +D+ G+LL + E + + R+ D + + +E ++ + E
Sbjct: 2 MTIKALFWDIGGVLLTNG-WDREQRADVAQRFGLDTDDFTERHRLAAPELELGRMTLAE- 59
Query: 68 GISDKLSAEDFLVQREETLQTLFPT-SELMPGASHLIRHLHAKGIPMCVATGSLARHFEL 126
+++ E + + S+ P L R L + M E
Sbjct: 60 -YLEQVVFYQPRDFTPEDFRAVMEEQSQPRPEVLALARDL-GQRYRMYSLNNEGRDLNEY 117
Query: 127 KTQKHRELFSLMHHVVRGDDPEVKQGKPSPDIFLAAAKRFEGGPIDSQEILVFEDAPSGV 186
+ + L + + KP+P ++ + + +E ++ +D V
Sbjct: 118 RIRTF-GLGEFLLAFFTSS--ALGVMKPNPAMYRLGLTLAQ---VRPEEAVMVDDRLQNV 171
Query: 187 LAAKNAGMSVVMVPDP 202
AA+ GM V D
Sbjct: 172 QAARAVGMHAVQCVDA 187
|
| >2pr7_A Haloacid dehalogenase/epoxide hydrolase family; NP_599989.1, uncharacterized protein, structural genomics; 1.44A {Corynebacterium glutamicum atcc 13032} Length = 137 | Back alignment and structure |
|---|
Score = 79.4 bits (196), Expect = 5e-19
Identities = 23/136 (16%), Positives = 44/136 (32%), Gaps = 13/136 (9%)
Query: 89 LFPTSELMPGASHLIRHLHAKGIPMCVATGSLARHFELKTQKHRELFSLMHHVVRGDDPE 148
L T E +L+ G+ + + ++ E ++ V+ E
Sbjct: 13 LDGTDEDQRRWRNLLAAAKKNGVGTVILSNDPGGLGAAPIREL-ETNGVVDKVLLSG--E 69
Query: 149 VKQGKPSPDIFLAAAKRFEGGPIDSQEILVFEDAPSGVLAAKNAGMSVVMVPDPRLDSSY 208
+ KP F AAA + + ++ ++ +D+ V A AG+ V
Sbjct: 70 LGVEKPEEAAFQAAADAID---LPMRDCVLVDDSILNVRGAVEAGLVGVYYQQF------ 120
Query: 209 HSNADQLLSSLLGFNP 224
A + L G
Sbjct: 121 -DRAVVEIVGLFGLEG 135
|
| >2hcf_A Hydrolase, haloacid dehalogenase-like family; NP_662590.1, ST genomics, PSI-2, protein structure initiative; 1.80A {Chlorobaculum tepidum} SCOP: c.108.1.6 Length = 234 | Back alignment and structure |
|---|
Score = 78.9 bits (195), Expect = 5e-18
Identities = 38/224 (16%), Positives = 66/224 (29%), Gaps = 21/224 (9%)
Query: 9 PITHVIFDMDGLLLDTEKFYTEVQELILARYNKTFDWSLKAKMMGKKAIEAAQVFVEETG 68
T V+FD+DG LL E V L T + GK + G
Sbjct: 3 SRTLVLFDIDGTLLKVESMNRRVLADALIEVYGTEGSTGSHDFSGKMDGAIIYEVLSNVG 62
Query: 69 ISDKLSAEDFLVQREE-----TLQTLFPTSELMPGASHLIRHLHAKG-IPMCVATGSLAR 122
+ A+ F +E + L+ G L+ L ++ + + + TG+
Sbjct: 63 LERAEIADKFDKAKETYIALFRERARREDITLLEGVRELLDALSSRSDVLLGLLTGNFEA 122
Query: 123 HFELKTQKHRELFSLMHHVVRGDDPEVKQGKPSPDIFLAAAKRFEGGPIDSQEILVFEDA 182
K + + DD P I L A+R G +I++ D
Sbjct: 123 SGRHKLKLP-GIDHYFPFGAFADD--ALDRNELPHIALERARRMTGANYSPSQIVIIGDT 179
Query: 183 PSGVLAAKNAGMSVVMVPDPRLDSSYHS-------NADQLLSSL 219
+ A+ + V + + L +
Sbjct: 180 EHDIRCARELDARSIAVA-----TGNFTMEELARHKPGTLFKNF 218
|
| >2oda_A Hypothetical protein pspto_2114; haloacid dehalogenase, phosphonoacetaldehyde hydrolase, protein binding; HET: EPE; 1.90A {Pseudomonas syringae PV} Length = 196 | Back alignment and structure |
|---|
Score = 76.9 bits (189), Expect = 1e-17
Identities = 19/124 (15%), Positives = 39/124 (31%), Gaps = 10/124 (8%)
Query: 77 DFLVQREETLQTLFPTSELMPGASHLIRHLHAKGIPMCVATGSLARHFELKTQKHRELFS 136
DF Q + ++L PGA + ++ L +G+P
Sbjct: 19 DFGAQAATSDTPDDEHAQLTPGAQNALKALRDQGMPCAWIDELPEALST------PLAAP 72
Query: 137 LMHHVVRGDDPEVKQGKPSPDIFLAAAKRFEGGPIDSQEILVFEDAPSGVLAAKNAGMSV 196
+ ++ G P PD A ++ ++ P + + NAG+
Sbjct: 73 VNDWMIAAPR--PTAGWPQPDACWMALMALNVSQLE--GCVLISGDPRLLQSGLNAGLWT 128
Query: 197 VMVP 200
+ +
Sbjct: 129 IGLA 132
|
| >2go7_A Hydrolase, haloacid dehalogenase-like family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.10A {Streptococcus pneumoniae} SCOP: c.108.1.6 Length = 207 | Back alignment and structure |
|---|
Score = 74.2 bits (183), Expect = 2e-16
Identities = 37/190 (19%), Positives = 71/190 (37%), Gaps = 10/190 (5%)
Query: 10 ITHVIFDMDGLLLDTEKFYTEVQELILARYNKTFDWSLKAKMMGKKAIEAAQVFVEETGI 69
T I+D+DG LLD+ + E A+++ +D + + K +++ +
Sbjct: 4 KTAFIWDLDGTLLDSYEAILSGIEETFAQFSIPYDKEKVREFIFKYSVQDL---LVRVAE 60
Query: 70 SDKLSAEDFLVQREETLQTLFPTSELMPGASHLIRHLHAKGIPMCVATGSLARHFELKTQ 129
L E R ++L LMPGA ++ GI + T +
Sbjct: 61 DRNLDVEVLNQVRAQSLAEKNAQVVLMPGAREVLAWADESGIQQFIYTH--KGNNAFTIL 118
Query: 130 KHRELFSLMHHVVRGDDPEVKQGKPSPDIFLAAAKRFEGGPIDSQEILVFEDAPSGVLAA 189
K + S ++ V+ KPSP+ +++ ++S D V A
Sbjct: 119 KDLGVESYFTEILTSQSGFVR--KPSPEAATYLLDKYQ---LNSDNTYYIGDRTLDVEFA 173
Query: 190 KNAGMSVVMV 199
+N+G+ +
Sbjct: 174 QNSGIQSINF 183
|
| >2hdo_A Phosphoglycolate phosphatase; NP_784602.1, structur genomics, PSI-2, protein structure initiative, joint center structural genomics; HET: MSE; 1.50A {Lactobacillus plantarum} SCOP: c.108.1.6 Length = 209 | Back alignment and structure |
|---|
Score = 73.7 bits (182), Expect = 3e-16
Identities = 40/200 (20%), Positives = 73/200 (36%), Gaps = 28/200 (14%)
Query: 9 PITHVIFDMDGLLLDTEKFYTEVQELILARYN-------KTFDWSLK-AKMMGKKAIEAA 60
++FD+DG L +++ YT V +LA Y + + + M + I A+
Sbjct: 3 TYQALMFDIDGTLTNSQPAYTTVMREVLATYGKPFSPAQAQKTFPMAAEQAMTELGIAAS 62
Query: 61 QVFVEETGISDKLSAEDFLVQREETLQTLFPTSELMPGASHLIRHLHAKGIPMCVATGSL 120
+ + F Q E+ + + + EL PG + L L + + + + T
Sbjct: 63 EF-------------DHFQAQYEDVMASHYDQIELYPGITSLFEQLPS-ELRLGIVTSQ- 107
Query: 121 ARHFELKTQKHRELFSLMHHVVRGDDPEVKQGKPSPDIFLAAAKRFEGGPIDSQEILVFE 180
R+ + M + DD + KP P L A ++ P Q L
Sbjct: 108 RRNELESGMRSYPFMMRMAVTISADDTPKR--KPDPLPLLTALEKVNVAP---QNALFIG 162
Query: 181 DAPSGVLAAKNAGMSVVMVP 200
D+ S A+ A + +
Sbjct: 163 DSVSDEQTAQAANVDFGLAV 182
|
| >2hoq_A Putative HAD-hydrolase PH1655; haloacid dehalogenase, structural genomics, NPPSFA, national on protein structural and functional analyses; 1.70A {Pyrococcus horikoshii} Length = 241 | Back alignment and structure |
|---|
Score = 73.2 bits (180), Expect = 8e-16
Identities = 42/206 (20%), Positives = 67/206 (32%), Gaps = 29/206 (14%)
Query: 10 ITHVIFDMDGLLLDTEKFYTE-----VQELILARYNKTFDWSLKA-----KMMGKKAIEA 59
+ + FD+D L+DT K ++ +I F+ + K G
Sbjct: 2 VKVIFFDLDDTLVDTSKLAEIARKNAIENMIRHGLPVDFETAYSELIELIKEYGSNFPYH 61
Query: 60 AQVFVEETGIS-DKLSAEDFLVQREETLQTLFPTSELMPGASHLIRHLHAKGIPMCVATG 118
+ + + ++ T F +PGA ++ L G + + T
Sbjct: 62 FDYLLRRLDLPYNPKWISAGVIAYHN---TKFAYLREVPGARKVLIRLKELGYELGIITD 118
Query: 119 SLARHFELKTQKHR----ELFSLMHHVVRGDDPEVKQGKPSPDIFLAAAKRFEGGPIDSQ 174
Q + EL HV+ D KP P IF A K F + +
Sbjct: 119 GNP-----VKQWEKILRLELDDFFEHVIISD--FEGVKKPHPKIFKKALKAFN---VKPE 168
Query: 175 EILVFEDAP-SGVLAAKNAGMSVVMV 199
E L+ D S + AK GM V
Sbjct: 169 EALMVGDRLYSDIYGAKRVGMKTVWF 194
|
| >2b0c_A Putative phosphatase; alpha-D-glucose-1-phosphate, structural genomic protein structure initiative, midwest center for structural genomics, MCSG; HET: G1P; 2.00A {Escherichia coli} SCOP: c.108.1.2 Length = 206 | Back alignment and structure |
|---|
Score = 72.3 bits (178), Expect = 9e-16
Identities = 30/207 (14%), Positives = 68/207 (32%), Gaps = 23/207 (11%)
Query: 5 SSKKPITHVIFDMDGLLL--DTEKFYTEVQEL----ILARYNKTFDWSLKAKMM-GKK-A 56
+ K+ IFD+ +++ D + +L + + + G+
Sbjct: 2 ARKEAKMLYIFDLGNVIVDIDFNRVLGAWSDLTRIPLASLKKSFHMGEAFHQHERGEISD 61
Query: 57 IEAAQVFVEETGISDKLSAEDFLVQREETLQTLFPTSELMPGASHLIRHLHAKGIPMCVA 116
A+ E + LS E F + L P ++ L +G + V
Sbjct: 62 EAFAEALCHEMALP--LSYEQFSHGWQAVF------VALRPEVIAIMHKLREQGHRVVVL 113
Query: 117 TGSLARHFELKTQKHRELFSLMHHVVR-GDDPEVKQGKPSPDIFLAAAKRFEGGPIDSQE 175
+ + H +++ E+ H+ ++ KP I+ + +
Sbjct: 114 SNTNRLHTTFWPEEYPEIRDAADHIYLSQ---DLGMRKPEARIYQHVLQAEG---FSPSD 167
Query: 176 ILVFEDAPSGVLAAKNAGMSVVMVPDP 202
+ F+D + A G++ ++V D
Sbjct: 168 TVFFDDNADNIEGANQLGITSILVKDK 194
|
| >1qyi_A ZR25, hypothetical protein; structural genomics, PSI, protein structure initiative, NORT structural genomics consortium, NESG; 2.50A {Staphylococcus aureus subsp} SCOP: c.108.1.13 Length = 384 | Back alignment and structure |
|---|
Score = 74.1 bits (181), Expect = 1e-15
Identities = 24/209 (11%), Positives = 60/209 (28%), Gaps = 22/209 (10%)
Query: 13 VIFDMDGLLLDTEKFYTEVQELILARYNKTF-DWSLKAKMMGKKAIEAAQVFVEETGISD 71
+ +D + + Y ++E + + + A E Q + + + +
Sbjct: 133 PLQFLDNVKVGKNNIYAALEEFATTELHVSDATLFSLKGALWTLAQEVYQEWYLGSKLYE 192
Query: 72 KLSAEDFLVQREETLQTLFPTSELMPGASHLIRHLHAKGIPMCVATGSLARHFE--LKTQ 129
+ + + + L+ L G + +ATG +
Sbjct: 193 DVEKKIARTTFKTGYIYQEIILRPVDEVKVLLNDLKGAGFELGIATGRPYTETVVPFENL 252
Query: 130 KHRELFSLMHHVVRGD--------DPEVKQGKPSPDIFLAAAKRFEGGP----------- 170
F D GKP+P ++AA
Sbjct: 253 GLLPYFEADFIATASDVLEAENMYPQARPLGKPNPFSYIAALYGNNRDKYESYINKQDNI 312
Query: 171 IDSQEILVFEDAPSGVLAAKNAGMSVVMV 199
++ ++ + D+ + +L+A+ G + +
Sbjct: 313 VNKDDVFIVGDSLADLLSAQKIGATFIGT 341
|
| >3d6j_A Putative haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides fragilis nctc 9343} Length = 225 | Back alignment and structure |
|---|
Score = 71.8 bits (177), Expect = 2e-15
Identities = 43/201 (21%), Positives = 75/201 (37%), Gaps = 17/201 (8%)
Query: 5 SSKKPITHVIFDMDGLLLDT-EKFYTEVQELILARYNKTFDWSLKAKMMGK---KAIEAA 60
S+ T +FD D L D+ T + ++ + + +GK ++
Sbjct: 1 SNAMKYTVYLFDFDYTLADSSRGIVTCFRSVLERHGYTGITDDMIKRTIGKTLEESFSIL 60
Query: 61 QVFVEETGISDKLSAEDFLVQ-REETLQTLFPTSELMPGASHLIRHLHAKGIPMCVATGS 119
TGI+D E F + +E + + L P + HL +GI + + +
Sbjct: 61 ------TGITDADQLESFRQEYSKEADIYMNANTILFPDTLPTLTHLKKQGIRIGIISTK 114
Query: 120 LARHFELKTQKHRELFSLMHHVVRGDDPEVKQGKPSPDIFLAAAKRFEGGPIDSQEILVF 179
R L ++ ++ G+D V KP P+ L A R + P +E+L
Sbjct: 115 -YRFRILSFLRNHMPDDWFDIIIGGED--VTHHKPDPEGLLLAIDRLKACP---EEVLYI 168
Query: 180 EDAPSGVLAAKNAGMSVVMVP 200
D+ A AG+S V
Sbjct: 169 GDSTVDAGTAAAAGVSFTGVT 189
|
| >2om6_A Probable phosphoserine phosphatase; rossmann fold, B-hairpin, four-helix bundle, structural GENO NPPSFA; 2.20A {Pyrococcus horikoshii} Length = 235 | Back alignment and structure |
|---|
Score = 71.0 bits (174), Expect = 4e-15
Identities = 36/204 (17%), Positives = 63/204 (30%), Gaps = 19/204 (9%)
Query: 8 KPITHVIFDMDGLLLDTEKFYTEVQELILARYNKTFDWSLKA---------KMMGKKAIE 58
+ + V FD+ LLD E + A KM + + +
Sbjct: 2 REVKLVTFDVWNTLLDLNIMLDEFSHQLAKISGLHIKDVANAVIEVRNEIKKMRAQASED 61
Query: 59 AAQVFVEE-TGISDKLSAEDFLVQRE-ETLQTLFPTSELMPGASHLIRHLHAKGIPMCVA 116
+V ++ KL + LV+R S ++ G ++ + +G+ V
Sbjct: 62 PRKVLTGSQEALAGKLKVDVELVKRATARAILNVDESLVLEGTKEALQFVKERGLKTAVI 121
Query: 117 TGSLARHFELKTQK--HRELFSLMHHVVRGDDPEVKQGKPSPDIFLAAAKRFEGGPIDSQ 174
+ L + D EV KP ++F FE + +
Sbjct: 122 GNVMFWPGSYTRLLLERFGLMEFIDKTFFAD--EVLSYKPRKEMFEKVLNSFE---VKPE 176
Query: 175 EILVFEDAPSG-VLAAKNAGMSVV 197
E L D + A+ GM V
Sbjct: 177 ESLHIGDTYAEDYQGARKVGMWAV 200
|
| >2i6x_A Hydrolase, haloacid dehalogenase-like family; HAD superfamily, struct genomics, PSI-2, protein structure initiative; HET: MSE; 2.40A {Porphyromonas gingivalis} Length = 211 | Back alignment and structure |
|---|
Score = 68.2 bits (167), Expect = 3e-14
Identities = 33/211 (15%), Positives = 67/211 (31%), Gaps = 27/211 (12%)
Query: 6 SKKPITHVIFDMDGLLL--DTEKFYTEVQELILAR----YNKTFDWSLKAKMM-GKK-AI 57
S I +++FD+ G+L+ + E+ + + +A + L + G+K
Sbjct: 1 SNAMIRNIVFDLGGVLIHLNREESIRRFKAIGVADIEEMLDPYLQKGLFLDLESGRKSEE 60
Query: 58 EAAQVFVEETGISDKLSAEDFLVQREETLQTLFPTSELMPGASHLIRHLHAKGIPMCVAT 117
E G +L+ + L+ + + + +
Sbjct: 61 EFRTELSRYIGK--ELTYQQVYDALLGFLEEISAEKFD-------YIDSLRPDYRLFLLS 111
Query: 118 GSLARHFELKTQK-----HRELFSLMHHVVRGDDPEVKQGKPSPDIFLAAAKRFEGGPID 172
+ +L R L S V ++ + KP+ DIFL +
Sbjct: 112 NTNPYVLDLAMSPRFLPSGRTLDSFFDKVYASC--QMGKYKPNEDIFLEMIADSG---MK 166
Query: 173 SQEILVFEDAPSGVLAAKNAGMSVVMVPDPR 203
+E L +D P+ V A+ G +
Sbjct: 167 PEETLFIDDGPANVATAERLGFHTYCPDNGE 197
|
| >2zg6_A Putative uncharacterized protein ST2620, probable 2-haloalkanoic; probable 2-haloalkanoic acid dehalogenase, hydrolase, structural genomics; 2.40A {Sulfolobus tokodaii} Length = 220 | Back alignment and structure |
|---|
Score = 67.0 bits (164), Expect = 8e-14
Identities = 27/202 (13%), Positives = 59/202 (29%), Gaps = 25/202 (12%)
Query: 10 ITHVIFDMDGLLLDTEKFYTEVQELILARYNKTFDWSLKAKMMGK--------KAIEAAQ 61
V+ D L+ + + E +L D + K
Sbjct: 3 YKAVLVDFGNTLVGFKPVFYEKVYQVLKDNGYDLDLRKVFRAYAKAMGMINYPDEDGLEH 62
Query: 62 VFVEETGISDKLSAEDFLVQREETLQTLFPTSELMPGASHLIRHLHAKGIPMCVATGSLA 121
V ++ + + LV+ + + L + L + G + + +
Sbjct: 63 VDPKDFLYILGIYPSERLVKELKEADIRDGEAFLYDDTLEFLEGLKSNGYKLALVS---- 118
Query: 122 RHFELKTQKHRELFSLMH---HVVRGDDPEVKQGKPSPDIFLAAAKRFEGGPIDSQEILV 178
+ + + E F L + E+K KP+P IF A + +
Sbjct: 119 -NASPRVKTLLEKFDLKKYFDALALSY--EIKAVKPNPKIFGFALAKVG------YPAVH 169
Query: 179 FEDAP-SGVLAAKNAGMSVVMV 199
D + AK + + +++
Sbjct: 170 VGDIYELDYIGAKRSYVDPILL 191
|
| >3mc1_A Predicted phosphatase, HAD family; PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.93A {Clostridium acetobutylicum} Length = 226 | Back alignment and structure |
|---|
Score = 66.0 bits (162), Expect = 3e-13
Identities = 33/210 (15%), Positives = 64/210 (30%), Gaps = 44/210 (20%)
Query: 8 KPITHVIFDMDGLLLDTEKFYTEVQELILARYNKTFDWSLKAKMMGKKAIEAAQV----- 62
+V+FD+DG L D+ E I + + + + +
Sbjct: 2 SLYNYVLFDLDGTLTDS-------AEGITKSVKYSL------NKFDIQVEDLSSLNKFVG 48
Query: 63 ------FVEETGISDKLSAEDFLVQREETLQTLFPTSELMPGASHLIRHLHAKGIPMCVA 116
F+E ++ + R+ +++ G L+ L G + VA
Sbjct: 49 PPLKTSFMEYYNFDEETATVAIDYYRDYFKAKGMFENKVYDGIEALLSSLKDYGFHLVVA 108
Query: 117 TG-------SLARHFELKTQKHRELFSLMHHVVRGDDPEVKQGKPSPDIFLAAAKRFEGG 169
T + HF+L F + G + K D+ A +
Sbjct: 109 TSKPTVFSKQILEHFKL-----AFYFD----AIVGSSLDGKL-STKEDVIRYAMESLN-- 156
Query: 170 PIDSQEILVFEDAPSGVLAAKNAGMSVVMV 199
I S + ++ D V+ A + + V
Sbjct: 157 -IKSDDAIMIGDREYDVIGALKNNLPSIGV 185
|
| >4dcc_A Putative haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 1.65A {Bacteroides thetaiotaomicron} PDB: 4dfd_A 4f71_A 4f72_A Length = 229 | Back alignment and structure |
|---|
Score = 65.2 bits (159), Expect = 4e-13
Identities = 31/208 (14%), Positives = 67/208 (32%), Gaps = 27/208 (12%)
Query: 8 KPITHVIFDMDGLLL--DTEKFYTEVQEL----ILARYNKTFDWSLKAKMM-GKK-AIEA 59
K I +++ D+ G+L+ D E+ +++ I ++ + + G E
Sbjct: 26 KGIKNLLIDLGGVLINLDRERCIENFKKIGFQNIEEKFCTHQLDGIFLQQEKGLITPAEF 85
Query: 60 AQVFVEETGISDKLSAEDFLVQREETLQTLFPTSELMPGASHLIRHLHAKGIPMCVATGS 119
E G +S + L +P + + + + + +
Sbjct: 86 RDGIREMMGKM--VSDKQIDAAWNSFLVD-------IPTYKLDLLLKLREKYVVYLLSNT 136
Query: 120 LARHFE-----LKTQKHRELFSLMHHVVRGDDPEVKQGKPSPDIFLAAAKRFEGGPIDSQ 174
H++ + ++ E+K KP P+IF A + ID +
Sbjct: 137 NDIHWKWVCKNAFPYRTFKVEDYFEKTY--LSYEMKMAKPEPEIFKAVTEDAG---IDPK 191
Query: 175 EILVFEDAPSGVLAAKNAGMSVVMVPDP 202
E +D+ A+ G+S
Sbjct: 192 ETFFIDDSEINCKVAQELGISTYTPKAG 219
|
| >3ed5_A YFNB; APC60080, bacillus subtilis subsp. subtilis STR. 168, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.72A {Bacillus subtilis} PDB: 3i76_A Length = 238 | Back alignment and structure |
|---|
Score = 64.3 bits (157), Expect = 1e-12
Identities = 35/232 (15%), Positives = 75/232 (32%), Gaps = 33/232 (14%)
Query: 8 KPITHVIFDMDGLLLDTEKFYTEVQELILARYNKTFDWSLKAKMM----------GKKAI 57
K ++FD+D +LD + L+ N +KA+ + +
Sbjct: 5 KRYRTLLFDVDDTILDFQAAEALALRLLFEDQNIPLTNDMKAQYKTINQGLWRAFEEGKM 64
Query: 58 EAAQV-------FVEETGI--SDKLSAEDFLVQREETLQTLFPTSELMPGASHLIRHLHA 108
+V ++E G L + + EE Q L+ GA LI +L
Sbjct: 65 TRDEVVNTRFSALLKEYGYEADGALLEQKYRRFLEEGHQ-------LIDGAFDLISNLQ- 116
Query: 109 KGIPMCVATGSLARHFELKTQKHRELFSLMHHVVRGDDPEVKQGKPSPDIFLAAAKRFEG 168
+ + + T ++ + + LF + + + KP + F +R
Sbjct: 117 QQFDLYIVTNGVSHTQYKRLRDS-GLFPFFKDIFVSE--DTGFQKPMKEYFNYVFERIPQ 173
Query: 169 GPIDSQEILVFEDAPSG-VLAAKNAGMSVVMVPDPRLDSSYHSNADQLLSSL 219
++ L+ D+ + + + AG+ + + + L
Sbjct: 174 --FSAEHTLIIGDSLTADIKGGQLAGLDTCWMNPDMKPNVPEIIPTYEIRKL 223
|
| >3sd7_A Putative phosphatase; structural genomics, haloacid dehalogenase-like hydrolase, H center for structural genomics of infectious diseases; HET: PGE; 1.70A {Clostridium difficile} Length = 240 | Back alignment and structure |
|---|
Score = 63.8 bits (156), Expect = 2e-12
Identities = 34/203 (16%), Positives = 67/203 (33%), Gaps = 28/203 (13%)
Query: 7 KKPITHVIFDMDGLLLDTEKFYTEVQELILARYNKTFDWSLKAKMMG-KKAIEAAQVFV- 64
KK V+FD+DG L D + E I + G K+ +E F+
Sbjct: 26 KKNYEIVLFDLDGTLTDPK-------EGITKSIQYSL------NSFGIKEDLENLDQFIG 72
Query: 65 --------EETGISDKLSAEDFLVQREETLQTLFPTSELMPGASHLIRHLHAKGIPMCVA 116
E DK + E RE +++ ++ L+ G + VA
Sbjct: 73 PPLHDTFKEYYKFEDKKAKEAVEKYREYFADKGIFENKIYENMKEILEMLYKNGKILLVA 132
Query: 117 TGSLARHFELKTQKHRELFSLMHHVVRGDDPEVKQGKPSPDIFLAAAKRFEGGPIDSQEI 176
T S F ++ ++ ++ + + ++ D ++
Sbjct: 133 T-SKPTVFAETILRYFDIDRYFKYIAGSNLDGTR--VNKNEVIQYVLDLCNVKDKD--KV 187
Query: 177 LVFEDAPSGVLAAKNAGMSVVMV 199
++ D ++ AK G+ + V
Sbjct: 188 IMVGDRKYDIIGAKKIGIDSIGV 210
|
| >2ah5_A COG0546: predicted phosphatases; MCSG, structural genomics, hydrola haloacid dehalogenase-like, PSI; 1.74A {Streptococcus pneumoniae} SCOP: c.108.1.6 Length = 210 | Back alignment and structure |
|---|
Score = 62.5 bits (153), Expect = 3e-12
Identities = 39/209 (18%), Positives = 76/209 (36%), Gaps = 47/209 (22%)
Query: 8 KPITHVIFDMDGLLLDTEKFYTEVQELILARYNKTFDWSLKAKMMGKKAIEAAQV--FV- 64
IT + FD+DG L+D+ I + TF K +G + +A + F+
Sbjct: 2 TSITAIFFDLDGTLVDS-------SIGIHNAFTYTF------KELGVPSPDAKTIRGFMG 48
Query: 65 ---EETGISDKLSAEDF--LVQ--REETLQTLFPTSELMPGASHLIRHLHAKGIPMCVAT 117
E + + LS + VQ R ++L P L+ L + P+ + T
Sbjct: 49 PPLESS-FATCLSKDQISEAVQIYRSYYKAKGIYEAQLFPQIIDLLEELSS-SYPLYITT 106
Query: 118 G-------SLARHFELKTQKHRELFSLMHHVVRGDDPEVKQGKPSPDIFLAAAKRFEGGP 170
+A++ E+ F + G PE D+ A + +
Sbjct: 107 TKDTSTAQDMAKNLEI-----HHFFD----GIYGSSPE---APHKADVIHQALQTHQ--- 151
Query: 171 IDSQEILVFEDAPSGVLAAKNAGMSVVMV 199
+ ++ ++ D +L A+ G+ + +
Sbjct: 152 LAPEQAIIIGDTKFDMLGARETGIQKLAI 180
|
| >2p11_A Hypothetical protein; putative haloacid dehalogenase-like hydrolase, structural GE joint center for structural genomics, JCSG; 2.20A {Burkholderia xenovorans} Length = 231 | Back alignment and structure |
|---|
Score = 62.5 bits (151), Expect = 6e-12
Identities = 31/220 (14%), Positives = 71/220 (32%), Gaps = 23/220 (10%)
Query: 1 MAAVSSKKPITHVIFDMDGLLLDTEKFYTEVQELILARY---NKTFDWSLKAKMMGKKAI 57
M A ++ +FD D LLD + +++ ++ + N W + + +
Sbjct: 2 MQATTATPHDIVFLFDCDNTLLDNDHVLADLRAHMMREFGAQNSARYWEIFETLRTELGY 61
Query: 58 EAAQVFVEETGISDKLSAEDFLVQREETLQTLFPTSELMPGASHLIRHLHAKGIPMCVAT 117
++ + L+ + F + + PGA + +RHL A+G P + +
Sbjct: 62 ADYLGALQRYRLEQPRDT-RLLLMSSFLIDYPFAS-RVYPGALNALRHLGARG-PTVILS 118
Query: 118 GSLARHFELKTQKHRELFSLMHHVVRGDDPEVKQGKPSPDIFLAAAKRFE--GGPIDSQE 175
K + L+ + V I++ + ++
Sbjct: 119 DGDVVFQPRKIARS-GLWDEVEGRV--------------LIYIHKELMLDQVMECYPARH 163
Query: 176 ILVFEDAPSGVLAAKNAGMSVVMVPDPRLDSSYHSNADQL 215
++ +D + A K A + + PR +
Sbjct: 164 YVMVDDKLRILAAMKKAWGARLTTVFPRQGHYAFDPKEIS 203
|
| >2gfh_A Haloacid dehalogenase-like hydrolase domain conta; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.90A {Mus musculus} SCOP: c.108.1.6 PDB: 2w4m_A Length = 260 | Back alignment and structure |
|---|
Score = 61.7 bits (150), Expect = 1e-11
Identities = 36/237 (15%), Positives = 76/237 (32%), Gaps = 35/237 (14%)
Query: 8 KPITHVIFDMDGLLLDTEKFYTEVQELILARYNKTFDWSLKAKM--------MGKKAIEA 59
+ V FD+D L+DT ++ + + +A++ + K+
Sbjct: 16 SRVRAVFFDLDNTLIDTAGASRRGMLEVIKLLQSKYHYKEEAEIICDKVQVKLSKECFHP 75
Query: 60 AQVFVEET--------------GISDKLSAEDFLVQREETLQTLFPTSELMPGASHLIRH 105
+ + G ++ AE+ T L ++
Sbjct: 76 YSTCITDVRTSHWEEAIQETKGGADNRKLAEECY---FLWKSTRLQHMILADDVKAMLTE 132
Query: 106 LHAKGIPMCVATGSLARHFELKTQKHRELFSLMHHVVRGDDPEVKQGKPSPDIFLAAAKR 165
L K + + + T + K + S +V G E K+ KP+P IF
Sbjct: 133 LR-KEVRLLLLTNGDRQTQREKIEAC-ACQSYFDAIVIGG--EQKEEKPAPSIFYHCCDL 188
Query: 166 FEGGPIDSQEILVFEDAPSG-VLAAKNAGM--SVVMVPDPRLDSSYHSNADQLLSSL 219
+ + ++ D + NAG+ +V + R+ + ++SS+
Sbjct: 189 LG---VQPGDCVMVGDTLETDIQGGLNAGLKATVWINKSGRVPLTSSPMPHYMVSSV 242
|
| >2nyv_A Pgpase, PGP, phosphoglycolate phosphatase; structural genomics, PSI-2, protein structure initiative; 2.10A {Aquifex aeolicus} PDB: 2yy6_A Length = 222 | Back alignment and structure |
|---|
Score = 61.0 bits (149), Expect = 1e-11
Identities = 36/214 (16%), Positives = 75/214 (35%), Gaps = 54/214 (25%)
Query: 9 PITHVIFDMDGLLLDTEKFYTEVQELILARYNKTFDWSLKAKMMGKKAIEAAQVFVEETG 68
+ ++FD+DG L+D+ +++ LA + +LK + + + ++ G
Sbjct: 2 SLRVILFDLDGTLIDS------AKDIALA-----LEKTLKELGLEEYYPDNVTKYIGG-G 49
Query: 69 ISDKLSAEDFLVQR---EETLQTLFPT------------SELMPGASHLIRHLHAKGIPM 113
+ L+++ ++ + ++ P + + L +KG +
Sbjct: 50 V-------RALLEKVLKDKFREEYVEVFRKHYLENPVVYTKPYPEIPYTLEALKSKGFKL 102
Query: 114 CVAT-------GSLARHFELKTQKHRELFSLMHHVVRGDDPEVKQGKPSPDIFLAAAKRF 166
V + + L F L +V GD K KPSP L +
Sbjct: 103 AVVSNKLEELSKKILDILNL-----SGYFDL---IVGGDTFGEK--KPSPTPVLKTLEIL 152
Query: 167 EGGPIDSQEILVFEDAPSGVLAAKNAGMSVVMVP 200
P ++ L+ D + + A K AG +
Sbjct: 153 GEEP---EKALIVGDTDADIEAGKRAGTKTALAL 183
|
| >2hsz_A Novel predicted phosphatase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: UNL; 1.90A {Haemophilus somnus 129PT} SCOP: c.108.1.6 Length = 243 | Back alignment and structure |
|---|
Score = 61.1 bits (149), Expect = 1e-11
Identities = 44/217 (20%), Positives = 79/217 (36%), Gaps = 47/217 (21%)
Query: 8 KPITHVIFDMDGLLLDTEKFYTEVQELI------LARYN---KTFDWSLK------AKMM 52
+ FD+DG L+++ + +L L N + + + A ++
Sbjct: 21 TQFKLIGFDLDGTLVNS------LPDLALSINSALKDVNLPQASEN-LVMTWIGNGADVL 73
Query: 53 GKKAIEAAQVFVEETGISDKLSA--EDFLVQREETLQTLFPTSELMPGASHLIRHLHAKG 110
++A++ A E+ D+ F E L + S L P + L A+G
Sbjct: 74 SQRAVDWACKQAEKELTEDEFKYFKRQFGFYYGENLCNI---SRLYPNVKETLEALKAQG 130
Query: 111 IPMCVAT-------GSLARHFELKTQKHRELFSLMHHVVRGDDPEVKQGKPSPDIFLAAA 163
+ V T + F + LFS ++ G KP P F
Sbjct: 131 YILAVVTNKPTKHVQPILTAFGI-----DHLFSE---MLGGQSLPEI--KPHPAPFYYLC 180
Query: 164 KRFEGGPIDSQEILVFEDAPSGVLAAKNAGMSVVMVP 200
+F P ++IL D+ + + AA +AG +VV +
Sbjct: 181 GKFGLYP---KQILFVGDSQNDIFAAHSAGCAVVGLT 214
|
| >3u26_A PF00702 domain protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, unknown function; 1.59A {Pyrococcus horikoshii} PDB: 1x42_A Length = 234 | Back alignment and structure |
|---|
Score = 59.7 bits (145), Expect = 5e-11
Identities = 39/225 (17%), Positives = 73/225 (32%), Gaps = 22/225 (9%)
Query: 10 ITHVIFDMDGLLLDTEKFYTEVQELILARYNK----------TFDWSLKAKMM--GKKAI 57
I V FD G L E +++ ++ + K
Sbjct: 2 IRAVFFDSLGTLNSVEGAAKSHLKIMEEVLGDYPLNPKTLLDEYEKLTREAFSNYAGKPY 61
Query: 58 EAAQVFVEET--GISDKLSAEDFLVQREETLQTLFPTSELMPGASHLIRHLHAKGIPMCV 115
+ +EE +++K + E +L+ EL P +++ L K + +
Sbjct: 62 RPLRDILEEVMRKLAEKYGFKYPENFWEISLRMSQRYGELYPEVVEVLKSLKGK-YHVGM 120
Query: 116 ATGSLARHFELKTQKHRELFSLMHHVVRGDDPEVKQGKPSPDIFLAAAKRFEGGPIDSQE 175
T S + L + + E KP P IF A K+ + +E
Sbjct: 121 ITDSDTEQAMAFL-DALGIKDLFDSITTSE--EAGFFKPHPRIFELALKKAG---VKGEE 174
Query: 176 ILVFEDAP-SGVLAAKNAGMSVVMVPDPRLDSSYHSNADQLLSSL 219
+ D P +KN GM+ +++ + D ++S L
Sbjct: 175 AVYVGDNPVKDCGGSKNLGMTSILLDRKGEKREFWDKCDFIVSDL 219
|
| >2hi0_A Putative phosphoglycolate phosphatase; YP_619066.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.51A {Lactobacillus delbrueckii} Length = 240 | Back alignment and structure |
|---|
Score = 59.2 bits (144), Expect = 7e-11
Identities = 34/243 (13%), Positives = 74/243 (30%), Gaps = 49/243 (20%)
Query: 10 ITHVIFDMDGLLLDTEKFYTEVQELI------LARYNKTFDWSLK---------AKMMGK 54
IFDMDG +LDT +L + D++++ +
Sbjct: 4 YKAAIFDMDGTILDT------SADLTSALNYAFEQTGHRHDFTVEDIKNFFGSGVVVAVT 57
Query: 55 KAIEAAQVFVEETGISDKLSAEDFLVQR-EETLQTLFPT------------SELMPGASH 101
+A+ E+ ++ E + + + + PG
Sbjct: 58 RALAYEAGSSRESLVAFGTKDEQIPEAVTQTEVNRVLEVFKPYYADHCQIKTGPFPGILD 117
Query: 102 LIRHLHAKGIPMCVAT---GSLARHFELKTQKHRELFSLMHHVVRGDDPEVKQGKPSPDI 158
L+++L KG+ + V + + L + F + + KP+PD+
Sbjct: 118 LMKNLRQKGVKLAVVSNKPNEAVQ--VLVEELFPGSFDF---ALGEKSGIRR--KPAPDM 170
Query: 159 FLAAAKRFEGGPIDSQEILVFEDAPSGVLAAKNAGMSVVMVPD--PRLDSSYHSNADQLL 216
K + + D+ + A+N+ M + V + A ++
Sbjct: 171 TSECVKVLGVPR---DKCVYIGDSEIDIQTARNSEMDEIAVNWGFRSVPFLQKHGATVIV 227
Query: 217 SSL 219
+
Sbjct: 228 DTA 230
|
| >3qnm_A Haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 1.70A {Bacteroides thetaiotaomicron} Length = 240 | Back alignment and structure |
|---|
Score = 58.6 bits (142), Expect = 1e-10
Identities = 31/218 (14%), Positives = 71/218 (32%), Gaps = 42/218 (19%)
Query: 7 KKPITHVIFDMDGLLLDTEKFYTEVQELILARYNKTFDWSLKAKMM-------------- 52
++ FD+D + + + E + +Y+ +
Sbjct: 2 SLKYKNLFFDLDDTIWAFSRNARDTFEEVYQKYSFDRYFDSFDHYYTLYQRRNTELWLEY 61
Query: 53 GKKAIEAAQV-------FVEETGISDKLSAEDFLVQREETLQTLFPTSELMPGASHLIRH 105
G+ + ++ ++ G+ D+ AE F + T LMP A ++ +
Sbjct: 62 GEGKVTKEELNRQRFFYPLQAVGVEDEALAERFSEDFFAIIPTKS---GLMPHAKEVLEY 118
Query: 106 LHAKGIPMCVAT-GSLARHFELKTQKHR----ELFSLMHHVVRGDDPEVKQGKPSPDIFL 160
L + + + G + Q + + ++ + ++ KP P+IF
Sbjct: 119 LA-PQYNLYILSNGF------RELQSRKMRSAGVDRYFKKIILSE--DLGVLKPRPEIFH 169
Query: 161 AAAKRFEGGPIDSQEILVFEDAPSG-VLAAKNAGMSVV 197
A + + +E L+ D+ + A GM
Sbjct: 170 FALSATQ---SELRESLMIGDSWEADITGAHGVGMHQA 204
|
| >3k1z_A Haloacid dehalogenase-like hydrolase domain-conta protein 3; HDHD3, haloacid dehalogenase-like hydrolase domain containin structural genomics; 1.55A {Homo sapiens} Length = 263 | Back alignment and structure |
|---|
Score = 58.6 bits (142), Expect = 2e-10
Identities = 30/217 (13%), Positives = 64/217 (29%), Gaps = 33/217 (15%)
Query: 10 ITHVIFDMDGLLLDTEKFYTEVQELILARYNKTFD-WSLKAKMMGKKAIEAAQVFVEETG 68
+ + +D+ LL E + + +L+ ++A A G
Sbjct: 1 MRLLTWDVKDTLLRLRHPLGEAYATKARAHGLEVEPSALEQGF--RQAYRAQSHSFPNYG 58
Query: 69 ISDKLSAEDFLVQR------------EETLQTLFP----------TSELMPGASHLIRHL 106
+S L++ + + + + + T +++ GA +R
Sbjct: 59 LSHGLTSRQWWLDVVLQTFHLAGVQDAQAVAPIAEQLYKDFSHPCTWQVLDGAEDTLREC 118
Query: 107 HAKGIPMCVATGSLARHFELKTQKHRELFSLMHHVVRGDDPEVKQGKPSPDIFLAAAKRF 166
+G+ + V + R + L V+ + KP P IF A +
Sbjct: 119 RTRGLRLAVISNFDRRLEGIL--GGLGLREHFDFVLTSE--AAGWPKPDPRIFQEALRLA 174
Query: 167 EGGPIDSQEILVFEDAPSG-VLAAKNAGMSVVMVPDP 202
++ D + GM +V P
Sbjct: 175 H---MEPVVAAHVGDNYLCDYQGPRAVGMHSFLVVGP 208
|
| >3ddh_A Putative haloacid dehalogenase-like family hydrol; hydrolase, HAD superfamily, ST genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides thetaiotaomicron} Length = 234 | Back alignment and structure |
|---|
Score = 56.4 bits (136), Expect = 7e-10
Identities = 42/209 (20%), Positives = 73/209 (34%), Gaps = 26/209 (12%)
Query: 7 KKPITHVIFDMDGLLLDTEKFYTEVQE-------------LILARYNKTFDWSLKAKMMG 53
K+ I + FD D L E F+ EV++ I A +T +L+ G
Sbjct: 5 KELIKVIAFDADDTLWSNEPFFQEVEKQYTDLLKPYGTSKEISAALFQTEMNNLQILGYG 64
Query: 54 KKAIEAAQVFVEETGISDKLSAEDFLVQREETLQTLFPTSELMPGASHLIRHLHAKG-IP 112
KA + V + K++A+ + L EL+PG ++ L G
Sbjct: 65 AKAFTISMVETALQISNGKIAADIIRQIVDLGKSLLKMPIELLPGVKETLKTLKETGKYK 124
Query: 113 MCVATGSLARHFELKTQKHRELFSLMHHVVRGDDPEVKQGKPSPDIFLAAAKRFEGGPID 172
+ VAT E K ++ L + D + +L + P
Sbjct: 125 LVVATKGDLLDQENKLER----SGLSPYF----DHIEVMSDKTEKEYLRLLSILQIAP-- 174
Query: 173 SQEILVFEDAP-SGVLAAKNAGMSVVMVP 200
E+L+ ++ S + + G V +P
Sbjct: 175 -SELLMVGNSFKSDIQPVLSLGGYGVHIP 202
|
| >1yns_A E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo sapiens} SCOP: c.108.1.22 PDB: 1zs9_A Length = 261 | Back alignment and structure |
|---|
Score = 56.3 bits (135), Expect = 1e-09
Identities = 36/238 (15%), Positives = 70/238 (29%), Gaps = 41/238 (17%)
Query: 1 MAAVSSKKPITHVIFDMDG---------------------LLLDTEKFYTEVQELI-LAR 38
M +S +T ++ D++G L T E Q+ + L R
Sbjct: 1 MVVLSVPAEVTVILLDIEGTTTPIAFVKDILFPYIEENVKEYLQTHWEEEECQQDVSLLR 60
Query: 39 YNKTFDWSLKAKMMGKKAIEAAQVFVEET--GISDKLSAEDFLVQREETLQTLFP----- 91
D L + A +++ + D + + L ++ L+ L
Sbjct: 61 KQAEEDAHLDGAVPIPAASGNGVDDLQQMIQAVVDNVCWQMSLDRKTTALKQLQGHMWRA 120
Query: 92 -------TSELMPGASHLIRHLHAKGIPMCVATGSLARHFELKTQKHRELFSLMHHVVRG 144
+E +R G+ + + + +L H ++ V
Sbjct: 121 AFTAGRMKAEFFADVVPAVRKWREAGMKVYIYSSGSVEAQKLLFG-HSTEGDILELVDGH 179
Query: 145 DDPEVKQGKPSPDIFLAAAKRFEGGPIDSQEILVFEDAPSGVLAAKNAGMSVVMVPDP 202
D ++ K + + A IL D AA+ A + V +V P
Sbjct: 180 FDTKI-GHKVESESYRKIADSIGCST---NNILFLTDVTREASAAEEADVHVAVVVRP 233
|
| >2no4_A (S)-2-haloacid dehalogenase IVA; HAD superfamily, rossman fold, hydrol; 1.93A {Burkholderia cepacia} PDB: 2no5_A* Length = 240 | Back alignment and structure |
|---|
Score = 54.5 bits (131), Expect = 3e-09
Identities = 40/235 (17%), Positives = 77/235 (32%), Gaps = 34/235 (14%)
Query: 8 KPITHVIFDMDGLLLDT--------EKFYTEVQELILARYNKTFDWSLKAKMMGK----- 54
+ +FD G LLD ++ + L + + ++S +M +
Sbjct: 12 DSLRACVFDAYGTLLDVHSAVMRNADEVGASAEALSMLWRQRQLEYSWTRTLMHQYADFW 71
Query: 55 KAIEAAQVFV-EETGISDKLSAEDFLVQREETLQTLFPTSELMPGASHLIRHLHAKGIPM 113
+ + A F + D+ +D L+ + L P A+ + L + G +
Sbjct: 72 QLTDEALTFALRTYHLEDRKGLKDRLMSAYKEL-------SAYPDAAETLEKLKSAGYIV 124
Query: 114 CVATGSLARHFELKTQKHRELFSLMHHVVRGDDPEVKQGKPSPDIFLAAAKRFEGGPIDS 173
+ + + K +L ++ + DD +K KP P I+ A R P
Sbjct: 125 AILSNGNDEMLQ-AALKASKLDRVLDSCLSADD--LKIYKPDPRIYQFACDRLGVNP--- 178
Query: 174 QEILVFEDAPSGVLAAKNAGMSVVMV-----PDPRLDSSYHSNADQL--LSSLLG 221
E+ + A G + V + P + + L L LL
Sbjct: 179 NEVCFVSSNAWDLGGAGKFGFNTVRINRQGNPPEYEFAPLKHQVNSLSELWPLLA 233
|
| >1zrn_A L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseudomonas SP} SCOP: c.108.1.1 PDB: 1zrm_A 1jud_A 1qh9_A Length = 232 | Back alignment and structure |
|---|
Score = 54.1 bits (130), Expect = 5e-09
Identities = 30/204 (14%), Positives = 56/204 (27%), Gaps = 27/204 (13%)
Query: 8 KPITHVIFDMDGLLLDTEKFYTEVQELILARY--------NKTFDWSLKAKMMGKK---- 55
I + FD+ G L D E R K +++ +M +
Sbjct: 2 DYIKGIAFDLYGTLFDVHSVVGRCDEAFPGRGREISALWRQKQLEYTWLRSLMNRYVNFQ 61
Query: 56 --AIEAAQVFVEETGISDKLSAEDFLVQREETLQTLFPTSELMPGASHLIRHLHAKGIPM 113
+A + G+ L L +R L +G+ +
Sbjct: 62 QATEDALRFTCRHLGLDLDARTRSTLCDAYLRLAP-------FSEVPDSLRELKRRGLKL 114
Query: 114 CVATGSLARHFELKTQKHRELFSLMHHVVRGDDPEVKQGKPSPDIFLAAAKRFEGGPIDS 173
+ + + + H L H++ D V+ KP ++ A + +D
Sbjct: 115 AILSNGSPQSID-AVVSHAGLRDGFDHLLSVDP--VQVYKPDNRVYELAEQALG---LDR 168
Query: 174 QEILVFEDAPSGVLAAKNAGMSVV 197
IL A+ G
Sbjct: 169 SAILFVASNAWDATGARYFGFPTC 192
|
| >3ib6_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.20A {Listeria monocytogenes} Length = 189 | Back alignment and structure |
|---|
Score = 52.9 bits (127), Expect = 6e-09
Identities = 16/120 (13%), Positives = 37/120 (30%), Gaps = 8/120 (6%)
Query: 83 EETLQTLFPTSELMPGASHLIRHLHAKGIPMCVATGSLARHFELKTQK--HRELFSLMHH 140
+ +P L A + + G + + + E+ + + +
Sbjct: 23 DHHPLDTYPEVVLRKNAKETLEKVKQLGFKQAILSNTATSDTEVIKRVLTNFGIIDYFDF 82
Query: 141 VVRGDDP--EVKQGKPSPDIFLAAAKRFEGGPIDSQEILVFEDAPSG-VLAAKNAGMSVV 197
+ + K KP IF + ID E ++ + ++ A AG+ +
Sbjct: 83 IYASNSELQPGKMEKPDKTIFDFTLNALQ---IDKTEAVMVGNTFESDIIGANRAGIHAI 139
|
| >2pke_A Haloacid delahogenase-like family hydrolase; NP_639141.1, ST genomics, joint center for structural genomics, JCSG; 1.81A {Xanthomonas campestris PV} Length = 251 | Back alignment and structure |
|---|
Score = 52.7 bits (126), Expect = 2e-08
Identities = 33/213 (15%), Positives = 65/213 (30%), Gaps = 32/213 (15%)
Query: 6 SKKPITHVIFDMDGLLLDTEKFYTEVQE---------------LILARYNKTFDWSLKAK 50
+ I V FD D L +E +Y + + +LK
Sbjct: 9 DGQAIQLVGFDGDDTLWKSEDYYRTAEADFEAILSGYLDLGDSRMQQHLLAVERRNLKIF 68
Query: 51 MMGKKAIEAAQVFVEETGISDKLSAEDFLVQREETLQTLFPTSELMPGASHLIRHLHAKG 110
G K + + + ++ A D E TL E++ G + + A
Sbjct: 69 GYGAKGMTLSMIETAIELTEARIEARDIQRIVEIGRATLQHPVEVIAGVREAVAAIAADY 128
Query: 111 IPMCVATGSLARHFELKTQKH--RELFSLMHHVVRGDDPEVKQGKPSPDIFLAAAKRFEG 168
+ + T H E K ++ +LF + V + P + F+
Sbjct: 129 -AVVLITKGDLFHQEQKIEQSGLSDLFPRIEVV----------SEKDPQTYARVLSEFD- 176
Query: 169 GPIDSQEILVFEDAP-SGVLAAKNAGMSVVMVP 200
+ ++ ++ ++ S V G + P
Sbjct: 177 --LPAERFVMIGNSLRSDVEPVLAIGGWGIYTP 207
|
| >3nuq_A Protein SSM1, putative nucleotide phosphatase; suppresses the 6-AU sensitivity of transcription elongation II; 1.70A {Saccharomyces cerevisiae} PDB: 3onn_A 3opx_A* Length = 282 | Back alignment and structure |
|---|
Score = 52.9 bits (126), Expect = 2e-08
Identities = 27/219 (12%), Positives = 63/219 (28%), Gaps = 10/219 (4%)
Query: 1 MAAVSSKKPITHVIFDMDGLLLDTEKFYTE-VQELILARYNKTFDWSL-KAKMMGKKAIE 58
++A + FD+D L + + +Q+ IL + S A ++ +
Sbjct: 48 ISATPQNPNLKVFFFDIDNCLYKSSTRIHDLMQQSILRFFQTHLKLSPEDAHVLNNSYYK 107
Query: 59 AAQVFVEETGISDKLSAEDFLVQREETLQTLFPTSELMPGASHLIRHLHAKGIPM--CVA 116
+ + + K++A ++ + + L + +++ L G +
Sbjct: 108 EYGLAIRGLVMFHKVNALEYN-RLVDDSLPLQDILKPDIPLRNMLLRLRQSGKIDKLWLF 166
Query: 117 TGSLARHFELKTQKHRELFSLMHHVVRGDDPEVKQG--KPSPDIFLAAAKRFEGGPIDSQ 174
T + H + + L + D KP F A K +
Sbjct: 167 TNAYKNHAIRCL-RLLGIADLFDGLTYCDYSRTDTLVCKPHVKAFEKAMKESGLAR--YE 223
Query: 175 EILVFEDAPSGVLAAKNAGMSVVMVPDPRLDSSYHSNAD 213
+D+ + GM + +
Sbjct: 224 NAYFIDDSGKNIETGIKLGMKTCIHLVENEVNEILGQTP 262
|
| >1qq5_A Protein (L-2-haloacid dehalogenase); hydrolase; 1.52A {Xanthobacter autotrophicus} SCOP: c.108.1.1 PDB: 1qq6_A* 1qq7_A* 1aq6_A Length = 253 | Back alignment and structure |
|---|
Score = 52.2 bits (125), Expect = 2e-08
Identities = 41/241 (17%), Positives = 69/241 (28%), Gaps = 34/241 (14%)
Query: 10 ITHVIFDMDGLLLDTEKFYTEVQELILARY--------NKTFDWSLKAKMMGKKAI---- 57
I V+FD G L D + + R K ++S +MG+ A
Sbjct: 2 IKAVVFDAYGTLFDVQSVADATERAYPGRGEYITQVWRQKQLEYSWLRALMGRYADFWSV 61
Query: 58 --EAAQVFVEETGISDKLSAEDFLVQREETLQTLFPTSELMPGASHLIRHLHAKGIPMCV 115
EA + G+ S + + L P + + L + +
Sbjct: 62 TREALAYTLGTLGLEPDESFLADM---AQAYNRLTPYPDAAQCLAEL------APLKRAI 112
Query: 116 ATGSLARHFELKTQKHRELFSLMHHVVRGDDPEVKQGKPSPDIFLAAAKRFEGGPIDSQE 175
+ + + L V+ D + KP PD + + P E
Sbjct: 113 LSNGAPDMLQ-ALVANAGLTDSFDAVISVD--AKRVFKPHPDSYALVEEVLGVTP---AE 166
Query: 176 ILVFEDAPSGVLAAKNAGMSVVMV-----PDPRLDSSYHSNADQLLSSLLGFNPKDWGLP 230
+L V AKN G SV V + + A + L + +
Sbjct: 167 VLFVSSNGFDVGGAKNFGFSVARVARLSQEALARELVSGTIAPLTMFKALRMREETYAEA 226
Query: 231 P 231
P
Sbjct: 227 P 227
|
| >3smv_A S-(-)-azetidine-2-carboxylate hydrolase; haloacid dehalogenase superfamily, L-azetidine-2- carboxylate; HET: GOL; 1.38A {Pseudomonas} Length = 240 | Back alignment and structure |
|---|
Score = 50.6 bits (121), Expect = 8e-08
Identities = 35/202 (17%), Positives = 66/202 (32%), Gaps = 20/202 (9%)
Query: 8 KPITHVIFDMDGLLLDTEKFYTEVQELILARYNKTFDWSLKAKMMGKKAIEAAQVFVEET 67
+ FD G L+D E + + R KTF ++ E+ Q
Sbjct: 4 TDFKALTFDCYGTLIDWETGIVNALQPLAKRTGKTFTSDELLEVF--GRNESPQQTETPG 61
Query: 68 GISDKL--SAEDFLVQR---------EETLQTLFPTSELMPGASHLIRHLHAKGIPMCVA 116
+ + + D + + E T P +++L K + +
Sbjct: 62 ALYQDILRAVYDRIAKEWGLEPDAAEREEFGTSVKNWPAFPDTVEALQYL-KKHYKLVIL 120
Query: 117 TGSLARHFELKTQKHRELFSLMHHVVRGDDPEVKQGKPSPDIFLAAAKRFEGGPIDSQEI 176
+ F+L K F H++ D V KP+P+ F I+ ++I
Sbjct: 121 SNIDRNEFKLSNAKLGVEF---DHIITAQD--VGSYKPNPNNFTYMIDALAKAGIEKKDI 175
Query: 177 LVFEDAPSG-VLAAKNAGMSVV 197
L ++ + A +AG+
Sbjct: 176 LHTAESLYHDHIPANDAGLVSA 197
|
| >3l8h_A Putative haloacid dehalogenase-like hydrolase; HAD superfamily, GMHB, D-glycero-D-manno-heptose-1, 7-bispho phosphatase; HET: FX1; 1.68A {Bordetella bronchiseptica} Length = 179 | Back alignment and structure |
|---|
Score = 44.1 bits (105), Expect = 6e-06
Identities = 27/154 (17%), Positives = 45/154 (29%), Gaps = 34/154 (22%)
Query: 94 ELMPGASHLIRHLHAKGIPMCVAT--GSLAR------HFELKTQKHRELFSLM------- 138
+PG+ I L + +AT LAR K + M
Sbjct: 27 IALPGSLQAIARLTQADWTVVLATNQSGLARGLFDTATLNAIHDKMHRALAQMGGVVDAI 86
Query: 139 ----HHVVRGDDPEVKQG--KPSPDIFLAAAKRFEGGPIDSQEILVFEDAPSGVLAAKNA 192
H P+ KP P ++ A+R+ +D + D+ + AA A
Sbjct: 87 FMCPHG------PDDGCACRKPLPGMYRDIARRY---DVDLAGVPAVGDSLRDLQAAAQA 137
Query: 193 GMSVVMVPDPR----LDSSYHSNADQLLSSLLGF 222
G + +V L ++ L
Sbjct: 138 GCAPWLVQTGNGRKTLAQGGLPEGTRVCEDLAAV 171
|
| >2wm8_A MDP-1, magnesium-dependent phosphatase 1; haloacid dehalogenase, protein phosphatase, hydrolase, magne metal-binding; 1.75A {Homo sapiens} PDB: 1u7o_A 1u7p_A Length = 187 | Back alignment and structure |
|---|
Score = 43.9 bits (103), Expect = 1e-05
Identities = 14/108 (12%), Positives = 39/108 (36%), Gaps = 10/108 (9%)
Query: 94 ELMPGASHLIRHLHAKGIPMCVATGSLARHFELKTQKHRELFSLMHHVVRGDDPEVKQGK 153
L P +++ L + G+P A+ + + + +LF H ++
Sbjct: 68 RLYPEVPEVLKRLQSLGVPGAAASRTSEIEGANQLLELFDLFRYFVHREIYPGSKIT--- 124
Query: 154 PSPDIFLAAAKRFEGGPIDSQEILVFEDAPSGVLAAKNAGMSVVMVPD 201
F ++ I +++ F+D ++ G++ + + +
Sbjct: 125 ----HFERLQQKTG---IPFSQMIFFDDERRNIVDVSKLGVTCIHIQN 165
|
| >2o2x_A Hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; 1.50A {Mesorhizobium loti} SCOP: c.108.1.19 Length = 218 | Back alignment and structure |
|---|
Score = 42.7 bits (101), Expect = 3e-05
Identities = 30/129 (23%), Positives = 45/129 (34%), Gaps = 27/129 (20%)
Query: 94 ELMPGASHLIRHLHAKGIPMCVAT--GSLAR------HFELKTQKHRELFSLM------- 138
L P I + GIP+ V T +AR F + EL
Sbjct: 56 VLRPQMLPAIATANRAGIPVVVVTNQSGIARGYFGWSAFAAVNGRVLELLREEGVFVDMV 115
Query: 139 ----HHVVRGDDPEVKQG----KPSPDIFLAAAKRFEGGPIDSQEILVFEDAPSGVLAAK 190
+H G P KP+P + + A KR +D Q L+ D + + A K
Sbjct: 116 LACAYHE-AGVGPLAIPDHPMRKPNPGMLVEAGKRL---ALDLQRSLIVGDKLADMQAGK 171
Query: 191 NAGMSVVMV 199
AG++ +
Sbjct: 172 RAGLAQGWL 180
|
| >2w43_A Hypothetical 2-haloalkanoic acid dehalogenase; hydrolase, metabolic process; HET: MES; 1.66A {Sulfolobus tokodaii} PDB: 2w11_A Length = 201 | Back alignment and structure |
|---|
Score = 42.1 bits (99), Expect = 5e-05
Identities = 31/198 (15%), Positives = 63/198 (31%), Gaps = 41/198 (20%)
Query: 10 ITHVIFDMDGLLLDTEKF----------YTEVQELILARYNKTFDWSLKAKMMGKKAIEA 59
+ + FD+ G +LDT YT + + + +Y F+ +
Sbjct: 1 MIILAFDIFGTVLDTSTVIQEFRNKQLEYTWLLTI-MGKY-VEFE---------EITKIT 49
Query: 60 AQVFVEETGISDKLSAEDFLVQREETLQTLFPTSELMPGASHLIRHLHAKGIPMCVATGS 119
+ ++ G K E + + + ++ + ++ GS
Sbjct: 50 LRYILKVRGEESKFDEELNKWKNLK-----------AYEDTKYLKEISEIAEVYALSNGS 98
Query: 120 LARHFELKTQKHRELFSLMHHVVRGDDPEVKQGKPSPDIFLAAAKRFEGGPIDSQEILVF 179
+ + + L + VK+ KPSP ++ G +E +
Sbjct: 99 --INEVKQHLERNGLLRYFKGIFSA--ESVKEYKPSPKVYKYFLDSI--GA---KEAFLV 149
Query: 180 EDAPSGVLAAKNAGMSVV 197
V+ AKNAGM +
Sbjct: 150 SSNAFDVIGAKNAGMRSI 167
|
| >2fea_A 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; 2633731, structural genomics, joint center for structural GE JCSG; HET: MSE; 2.00A {Bacillus subtilis} SCOP: c.108.1.20 Length = 236 | Back alignment and structure |
|---|
Score = 41.7 bits (98), Expect = 8e-05
Identities = 18/125 (14%), Positives = 43/125 (34%), Gaps = 33/125 (26%)
Query: 3 AVSSKKPITHVIFDMDGLLLDTEKFYTEVQELILARYNKTFDWSLKAKMMGKKAIEAAQV 62
++++KP +I D DG + + ++ K A
Sbjct: 1 GMTTRKPF--IICDFDGTITMND-----------------NIINI-MKTFAPPEWMA--- 37
Query: 63 FVEETGISDKLSAEDFLVQR---------EETLQTLFPTSELMPGASHLIRHLHAKGIPM 113
+++ +S LS ++ + + EE + +++ G + ++ IP
Sbjct: 38 -LKDGVLSKTLSIKEGVGRMFGLLPSSLKEEITSFVLEDAKIREGFREFVAFINEHEIPF 96
Query: 114 CVATG 118
V +G
Sbjct: 97 YVISG 101
|
| >2gmw_A D,D-heptose 1,7-bisphosphate phosphatase; Zn-binding protein, hydrolase; 1.50A {Escherichia coli} SCOP: c.108.1.19 PDB: 3esq_A 3esr_A 3l1u_A 3l1v_A 3l8e_A 3l8f_A 3l8g_A* Length = 211 | Back alignment and structure |
|---|
Score = 41.1 bits (97), Expect = 9e-05
Identities = 28/124 (22%), Positives = 41/124 (33%), Gaps = 27/124 (21%)
Query: 94 ELMPGASHLIRHLHAKGIPMCVAT--GSLAR------HFELKTQKHRELFSLM------- 138
E + G +R L G + V T +AR FE T+ +
Sbjct: 50 EFIDGVIDAMRELKKMGFALVVVTNQSGIARGKFTEAQFETLTEWMDWSLADRDVDLDGI 109
Query: 139 ----HHVVRGDDPEVKQG----KPSPDIFLAAAKRFEGGPIDSQEILVFEDAPSGVLAAK 190
HH +G E +Q KP P + L+A ID + D + AA
Sbjct: 110 YYCPHHP-QGSVEEFRQVCDCRKPHPGMLLSARDYL---HIDMAASYMVGDKLEDMQAAV 165
Query: 191 NAGM 194
A +
Sbjct: 166 AANV 169
|
| >3m1y_A Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, phophoserine phosphatase, protein structure initiative, structural genomics; 2.40A {Helicobacter pylori} Length = 217 | Back alignment and structure |
|---|
Score = 40.7 bits (96), Expect = 1e-04
Identities = 25/165 (15%), Positives = 51/165 (30%), Gaps = 39/165 (23%)
Query: 13 VIFDMDGLLLDTEKFYTEVQELILARYNKTFDWSLKAKMMGKKAIEAAQVFVEETGISDK 72
+FD D L++ E E + A+ G E + ++ +
Sbjct: 7 AVFDFDSTLVNAE-----TIESL-------------ARAWGVFD-EVKTI--TLKAMNGE 45
Query: 73 LSAEDFLVQR--------EETLQTLFPTSELMPGASHLIRHLHAKGIPMCVATGSLARHF 124
L+ R + + + + L GA L+ L K + +G F
Sbjct: 46 TDFHKSLILRVSKLKNMPLKLAKEVCESLPLFEGALELVSALKEKNYKVVCFSGG----F 101
Query: 125 ELKTQKHRELFSLMHHVVRGDDPEVKQGK----PSPDIFLAAAKR 165
+L T +R+ L + V+ + + + +K
Sbjct: 102 DLATNHYRD--LLHLDAAFSNTLIVENDALNGLVTGHMMFSHSKG 144
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 41.0 bits (95), Expect = 2e-04
Identities = 39/240 (16%), Positives = 77/240 (32%), Gaps = 69/240 (28%)
Query: 25 EKFYTEVQELILARYN----KTFDWSLKAKM-------------M---GKK--AIEAAQV 62
++ Y + Q + A+YN + + L+ + + GK A++
Sbjct: 117 DRLYNDNQ--VFAKYNVSRLQPY-LKLRQALLELRPAKNVLIDGVLGSGKTWVALDVCLS 173
Query: 63 FVEETGISDKL---------SAEDFLVQREETLQTLFPTSELMPGASHLIRHLHAKGIPM 113
+ + + K+ S E L E LQ L ++ P + R H+ I +
Sbjct: 174 YKVQCKMDFKIFWLNLKNCNSPETVL----EMLQKLL--YQIDP--NWTSRSDHSSNIKL 225
Query: 114 CV--ATGSLARHFELKTQKHRELFSLMHHVVRGDDPEVKQGKPSPDIFLAAAKRFEGGPI 171
+ L R + K ++ L+ V+ + V+ + + F
Sbjct: 226 RIHSIQAELRRLLKSKPYEN----CLL--VL--LN--VQ----NAKAW----NAFNLS-- 265
Query: 172 DSQEILVFEDAPSGVLAAKNAGMSVVMVPDPRLDSSYHSNADQLLSSLLGFNPKDWGLPP 231
+ +L V +A + + D + LL L P+D LP
Sbjct: 266 -CKILLTTRFK--QVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQD--LPR 320
|
| >3p96_A Phosphoserine phosphatase SERB; ssgcid, structural genomics, structural genomics center for infectious disease, hydrolas; 2.05A {Mycobacterium avium} Length = 415 | Back alignment and structure |
|---|
Score = 40.2 bits (94), Expect = 3e-04
Identities = 33/165 (20%), Positives = 51/165 (30%), Gaps = 39/165 (23%)
Query: 13 VIFDMDGLLLDTEKFYTEVQELILARYNKTFDWSLKAKMMGKKAIEAAQVFVEETGISDK 72
++FD+D L+ E + A G + AA + + + +
Sbjct: 188 IVFDVDSTLVQGEV------------------IEMLAAKAGAEGQVAA---ITDAAMRGE 226
Query: 73 LSAEDFLVQR--------EETLQTLFPTSELMPGASHLIRHLHAKGIPMCVATGSLARHF 124
L L QR + + ELMPGA +R L G V +G R
Sbjct: 227 LDFAQSLQQRVATLAGLPATVIDEVAGQLELMPGARTTLRTLRRLGYACGVVSGGF-RRI 285
Query: 125 ELKTQKHRELFSLMHHVVRGDDPEVKQGK----PSPDIFLAAAKR 165
+ LM V ++ E+ G I A K
Sbjct: 286 IEPLAEE-----LMLDYVAANELEIVDGTLTGRVVGPIIDRAGKA 325
|
| >1l7m_A Phosphoserine phosphatase; rossmann fold, four-helix bundle, B-hairpin, structural genomics, BSGC structure funded by NIH; 1.48A {Methanocaldococcus jannaschii} SCOP: c.108.1.4 PDB: 1f5s_A 1l7n_A 1l7p_A* 1l7o_A* 1j97_A* Length = 211 | Back alignment and structure |
|---|
Score = 39.4 bits (93), Expect = 3e-04
Identities = 21/114 (18%), Positives = 39/114 (34%), Gaps = 29/114 (25%)
Query: 13 VIFDMDGLLLDTEKFYTEVQELILARYNKTFDWSLKAKMMGKKAIEAAQVFVEETGISDK 72
++FD D L++ E + I A+ G + + + + K
Sbjct: 8 ILFDFDSTLVNNE-----TIDEI-------------AREAGVEEEVKK---ITKEAMEGK 46
Query: 73 LSAEDFLVQR--------EETLQTLFPTSELMPGASHLIRHLHAKGIPMCVATG 118
L+ E L +R E ++ GA I+ L +G + V +G
Sbjct: 47 LNFEQSLRKRVSLLKDLPIEKVEKAIKRITPTEGAEETIKELKNRGYVVAVVSG 100
|
| >3i28_A Epoxide hydrolase 2; aromatic hydrocarbons catabolism, detoxification, magnesium, metal-binding, peroxisome; HET: 34N; 1.95A {Homo sapiens} PDB: 1s8o_A* 1zd2_P* 1vj5_A* 1zd4_A* 1zd5_A* 3i1y_A* 1zd3_A* 3koo_A* 3otq_A* 1cqz_A 1cr6_A* 1ek1_A* 1ek2_A* 3ans_A* 3ant_A* 3pdc_A* Length = 555 | Back alignment and structure |
|---|
Score = 39.5 bits (92), Expect = 6e-04
Identities = 33/210 (15%), Positives = 67/210 (31%), Gaps = 29/210 (13%)
Query: 13 VIFDMDGLLL---------DTEKFY-----TEVQELILARYNKTFDWSLKAKMMGKKAIE 58
+FD+DG+L TE+ +K ++ + I
Sbjct: 6 AVFDLDGVLALPAVFGVLGRTEEALALPRGLLNDAFQKGGPEGATTRLMKGEITLSQWIP 65
Query: 59 AAQVFVEETGISDKLSA-EDFLVQREETLQTLFPTSELMPGASHLIRHLHAKGIPMCVAT 117
+ + + K+ ++F ++ E ++ L KG +
Sbjct: 66 LMEENCRKCSETAKVCLPKNFSIK--EIFDKAISARKINRPMLQAALMLRKKGFTTAI-- 121
Query: 118 GSLARHFELKTQKHRELFSLMHHVVRGDDP-----EVKQGKPSPDIFLAAAKRFEGGPID 172
L + + L LM + D +V KP P I+ + P
Sbjct: 122 --LTNTWLDDRAERDGLAQLMCELKMHFDFLIESCQVGMVKPEPQIYKFLLDTLKASP-- 177
Query: 173 SQEILVFEDAPSGVLAAKNAGMSVVMVPDP 202
E++ +D + + A++ GM ++V D
Sbjct: 178 -SEVVFLDDIGANLKPARDLGMVTILVQDT 206
|
| >3n28_A Phosphoserine phosphatase; HAD family hydrolase, structural genomics, PSI, protein STRU initiative, nysgrc; 2.30A {Vibrio cholerae} Length = 335 | Back alignment and structure |
|---|
Score = 39.0 bits (91), Expect = 7e-04
Identities = 35/165 (21%), Positives = 56/165 (33%), Gaps = 39/165 (23%)
Query: 13 VIFDMDGLLLDTEKFYTEVQELILARYNKTFDWSLKAKMMGKKAIEAAQVFVEETGISDK 72
++ DMD + E + I AK+ G A V E + +
Sbjct: 110 IVLDMDSTAIQIE-----CIDEI-------------AKLAGVGEEVAE---VTERAMQGE 148
Query: 73 LSAEDFLVQR--------EETLQTLFPTSELMPGASHLIRHLHAKGIPMCVATGSLARHF 124
L E L R E+ L + T LMP L+ LHA G + +A+G +F
Sbjct: 149 LDFEQSLRLRVSKLKDAPEQILSQVRETLPLMPELPELVATLHAFGWKVAIASGGF-TYF 207
Query: 125 ELKTQKHRELFSLMHHVVRGDDPEVKQGK----PSPDIFLAAAKR 165
++ L + + E+ GK ++ A K
Sbjct: 208 SDYLKEQ-----LSLDYAQSNTLEIVSGKLTGQVLGEVVSAQTKA 247
|
| >2g80_A Protein UTR4; YEL038W, UTR4 protein (unknown transcript 4 protein), struct genomics, PSI, protein structure initiative; 2.28A {Saccharomyces cerevisiae} SCOP: c.108.1.22 Length = 253 | Back alignment and structure |
|---|
Score = 38.6 bits (89), Expect = 8e-04
Identities = 22/214 (10%), Positives = 58/214 (27%), Gaps = 22/214 (10%)
Query: 2 AAVSSKKPITHVIFDMDGLLLDT----EKFYTEVQELILARYNKTFDWSLKAKMMGKKAI 57
+ + D++G + E + + + S + ++ + I
Sbjct: 23 RIPKMGDNYSTYLLDIEGTVCPISFVKETLFPYFTNKVPQLVQQDTRDSPVSNILSQFHI 82
Query: 58 EAAQVFVEETGISDKLSAEDFLVQREETLQTL-----FPTSELMPGASHLIRHLHAKGIP 112
+ + +L A+D + LQ + + ++ +
Sbjct: 83 DNKEQLQAHI---LELVAKDVKDPILKQLQGYVWAHGYESGQIKAPVYADAIDFIKRKKR 139
Query: 113 MCV-------ATGSLARHFELKTQKHRELFSLMHHVVRGDDPEVKQGKPSPDIFLAAAKR 165
+ + A L + + + L ++ D K + +
Sbjct: 140 VFIYSSGSVKAQKLLFGYVQDPNAPAHDSLDLNSYIDGYFDINTSGKKTETQSYANILRD 199
Query: 166 FEGGPIDSQEILVFEDAPSGVLAAKNAGMSVVMV 199
E+L D P + AA G++ +
Sbjct: 200 IGAKA---SEVLFLSDNPLELDAAAGVGIATGLA 230
|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 237 | |||
| 3l5k_A | 250 | Protein GS1, haloacid dehalogenase-like hydrolase | 100.0 | |
| 4g9b_A | 243 | Beta-PGM, beta-phosphoglucomutase; HAD, putative p | 100.0 | |
| 3kbb_A | 216 | Phosphorylated carbohydrates phosphatase TM_1254; | 100.0 | |
| 4gib_A | 250 | Beta-phosphoglucomutase; rossmann fold, HAD-like, | 100.0 | |
| 2pib_A | 216 | Phosphorylated carbohydrates phosphatase TM_1254; | 100.0 | |
| 3e58_A | 214 | Putative beta-phosphoglucomutase; structu genomics | 100.0 | |
| 3s6j_A | 233 | Hydrolase, haloacid dehalogenase-like family; stru | 100.0 | |
| 4ex6_A | 237 | ALNB; modified rossman fold, phosphatase, magnesiu | 100.0 | |
| 3qxg_A | 243 | Inorganic pyrophosphatase; hydrolase, magnesium bi | 100.0 | |
| 2ah5_A | 210 | COG0546: predicted phosphatases; MCSG, structural | 100.0 | |
| 4eek_A | 259 | Beta-phosphoglucomutase-related protein; hydrolase | 100.0 | |
| 3dv9_A | 247 | Beta-phosphoglucomutase; structural genomics, APC6 | 100.0 | |
| 2hi0_A | 240 | Putative phosphoglycolate phosphatase; YP_619066.1 | 100.0 | |
| 3mc1_A | 226 | Predicted phosphatase, HAD family; PSI2, NYSGXRC, | 100.0 | |
| 3nas_A | 233 | Beta-PGM, beta-phosphoglucomutase; PSI, structural | 100.0 | |
| 2nyv_A | 222 | Pgpase, PGP, phosphoglycolate phosphatase; structu | 100.0 | |
| 2hsz_A | 243 | Novel predicted phosphatase; structural genomics, | 100.0 | |
| 2hdo_A | 209 | Phosphoglycolate phosphatase; NP_784602.1, structu | 100.0 | |
| 3iru_A | 277 | Phoshonoacetaldehyde hydrolase like protein; phosp | 100.0 | |
| 3sd7_A | 240 | Putative phosphatase; structural genomics, haloaci | 100.0 | |
| 3qnm_A | 240 | Haloacid dehalogenase-like hydrolase; structural g | 100.0 | |
| 3ed5_A | 238 | YFNB; APC60080, bacillus subtilis subsp. subtilis | 100.0 | |
| 1te2_A | 226 | Putative phosphatase; structural genomics, phospha | 99.98 | |
| 3kzx_A | 231 | HAD-superfamily hydrolase, subfamily IA, variant; | 99.98 | |
| 2om6_A | 235 | Probable phosphoserine phosphatase; rossmann fold, | 99.98 | |
| 2go7_A | 207 | Hydrolase, haloacid dehalogenase-like family; stru | 99.97 | |
| 2wf7_A | 221 | Beta-PGM, beta-phosphoglucomutase; transition stat | 99.97 | |
| 2fdr_A | 229 | Conserved hypothetical protein; SAD, structural ge | 99.97 | |
| 3um9_A | 230 | Haloacid dehalogenase, type II; haloacid dehalogen | 99.97 | |
| 2hoq_A | 241 | Putative HAD-hydrolase PH1655; haloacid dehalogena | 99.97 | |
| 3k1z_A | 263 | Haloacid dehalogenase-like hydrolase domain-conta | 99.97 | |
| 3d6j_A | 225 | Putative haloacid dehalogenase-like hydrolase; str | 99.97 | |
| 1yns_A | 261 | E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo | 99.97 | |
| 3umb_A | 233 | Dehalogenase-like hydrolase; 2.20A {Ralstonia sola | 99.97 | |
| 3ddh_A | 234 | Putative haloacid dehalogenase-like family hydrol; | 99.97 | |
| 1swv_A | 267 | Phosphonoacetaldehyde hydrolase; HAD enzyme superf | 99.97 | |
| 2hcf_A | 234 | Hydrolase, haloacid dehalogenase-like family; NP_6 | 99.97 | |
| 2gfh_A | 260 | Haloacid dehalogenase-like hydrolase domain conta; | 99.97 | |
| 2qlt_A | 275 | (DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, sac | 99.97 | |
| 3smv_A | 240 | S-(-)-azetidine-2-carboxylate hydrolase; haloacid | 99.97 | |
| 3m9l_A | 205 | Hydrolase, haloacid dehalogenase-like family; HAD | 99.97 | |
| 1zrn_A | 232 | L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseud | 99.97 | |
| 3umg_A | 254 | Haloacid dehalogenase; defluorinase, hydrolase; 2. | 99.96 | |
| 2no4_A | 240 | (S)-2-haloacid dehalogenase IVA; HAD superfamily, | 99.96 | |
| 2pke_A | 251 | Haloacid delahogenase-like family hydrolase; NP_63 | 99.96 | |
| 3u26_A | 234 | PF00702 domain protein; structural genomics, PSI-b | 99.96 | |
| 3umc_A | 254 | Haloacid dehalogenase; HY; 2.15A {Pseudomonas aeru | 99.96 | |
| 2g80_A | 253 | Protein UTR4; YEL038W, UTR4 protein (unknown trans | 99.96 | |
| 3nuq_A | 282 | Protein SSM1, putative nucleotide phosphatase; sup | 99.96 | |
| 3vay_A | 230 | HAD-superfamily hydrolase; rossmann fold, haloacid | 99.96 | |
| 4dcc_A | 229 | Putative haloacid dehalogenase-like hydrolase; mag | 99.96 | |
| 2fi1_A | 190 | Hydrolase, haloacid dehalogenase-like family; stru | 99.96 | |
| 2zg6_A | 220 | Putative uncharacterized protein ST2620, probable | 99.95 | |
| 2i6x_A | 211 | Hydrolase, haloacid dehalogenase-like family; HAD | 99.95 | |
| 2b0c_A | 206 | Putative phosphatase; alpha-D-glucose-1-phosphate, | 99.95 | |
| 3cnh_A | 200 | Hydrolase family protein; NP_295428.1, predicted h | 99.95 | |
| 2p11_A | 231 | Hypothetical protein; putative haloacid dehalogena | 99.95 | |
| 1qq5_A | 253 | Protein (L-2-haloacid dehalogenase); hydrolase; 1. | 99.95 | |
| 3m1y_A | 217 | Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, | 99.94 | |
| 2w43_A | 201 | Hypothetical 2-haloalkanoic acid dehalogenase; hyd | 99.94 | |
| 2c4n_A | 250 | Protein NAGD; nucleotide phosphatase, HAD superfam | 99.94 | |
| 3ib6_A | 189 | Uncharacterized protein; structural genomics, unkn | 99.94 | |
| 2oda_A | 196 | Hypothetical protein pspto_2114; haloacid dehaloge | 99.94 | |
| 1nnl_A | 225 | L-3-phosphoserine phosphatase; PSP, HPSP, phospho- | 99.93 | |
| 3l8h_A | 179 | Putative haloacid dehalogenase-like hydrolase; HAD | 99.93 | |
| 1yv9_A | 264 | Hydrolase, haloacid dehalogenase family; hypotheti | 99.92 | |
| 4eze_A | 317 | Haloacid dehalogenase-like hydrolase; magnesium bi | 99.92 | |
| 3i28_A | 555 | Epoxide hydrolase 2; aromatic hydrocarbons catabol | 99.92 | |
| 2gmw_A | 211 | D,D-heptose 1,7-bisphosphate phosphatase; Zn-bindi | 99.91 | |
| 2ho4_A | 259 | Haloacid dehalogenase-like hydrolase domain contai | 99.91 | |
| 1rku_A | 206 | Homoserine kinase; phosphoserine phosphatase, phos | 99.9 | |
| 3fvv_A | 232 | Uncharacterized protein; unknown function, structu | 99.9 | |
| 1l7m_A | 211 | Phosphoserine phosphatase; rossmann fold, four-hel | 99.89 | |
| 3kd3_A | 219 | Phosphoserine phosphohydrolase-like protein; csgid | 99.89 | |
| 2fea_A | 236 | 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate | 99.89 | |
| 3p96_A | 415 | Phosphoserine phosphatase SERB; ssgcid, structural | 99.89 | |
| 2pr7_A | 137 | Haloacid dehalogenase/epoxide hydrolase family; NP | 99.88 | |
| 2o2x_A | 218 | Hypothetical protein; structural genomics, joint c | 99.88 | |
| 1q92_A | 197 | 5(3)-deoxyribonucleotidase; alpha-beta rossman fol | 99.87 | |
| 2wm8_A | 187 | MDP-1, magnesium-dependent phosphatase 1; haloacid | 99.87 | |
| 1vjr_A | 271 | 4-nitrophenylphosphatase; TM1742, structural genom | 99.87 | |
| 2fpr_A | 176 | Histidine biosynthesis bifunctional protein HISB; | 99.86 | |
| 4ap9_A | 201 | Phosphoserine phosphatase; hydrolase, haloacid deh | 99.86 | |
| 2x4d_A | 271 | HLHPP, phospholysine phosphohistidine inorganic py | 99.85 | |
| 2i7d_A | 193 | 5'(3')-deoxyribonucleotidase, cytosolic type; hydr | 99.85 | |
| 3n28_A | 335 | Phosphoserine phosphatase; HAD family hydrolase, s | 99.85 | |
| 2hx1_A | 284 | Predicted sugar phosphatases of the HAD superfamil | 99.85 | |
| 2b82_A | 211 | APHA, class B acid phosphatase; DDDD acid phosphat | 99.85 | |
| 2oyc_A | 306 | PLP phosphatase, pyridoxal phosphate phosphatase; | 99.85 | |
| 3a1c_A | 287 | Probable copper-exporting P-type ATPase A; ATP-bin | 99.84 | |
| 1qyi_A | 384 | ZR25, hypothetical protein; structural genomics, P | 99.84 | |
| 1zjj_A | 263 | Hypothetical protein PH1952; alpha/beta hydrolase | 99.84 | |
| 3epr_A | 264 | Hydrolase, haloacid dehalogenase-like family; stru | 99.83 | |
| 2p9j_A | 162 | Hypothetical protein AQ2171; secsg, riken, PSI, st | 99.82 | |
| 3mmz_A | 176 | Putative HAD family hydrolase; structural genomics | 99.82 | |
| 3pdw_A | 266 | Uncharacterized hydrolase YUTF; structural genomic | 99.82 | |
| 3skx_A | 280 | Copper-exporting P-type ATPase B; P1B-ATPase, ATP | 99.82 | |
| 2yj3_A | 263 | Copper-transporting ATPase; hydrolase, P-type ATPa | 99.7 | |
| 3qgm_A | 268 | P-nitrophenyl phosphatase (PHO2); structural genom | 99.81 | |
| 3e8m_A | 164 | Acylneuraminate cytidylyltransferase; 2-keto-3-deo | 99.81 | |
| 3ij5_A | 211 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; | 99.8 | |
| 3gyg_A | 289 | NTD biosynthesis operon putative hydrolase NTDB; P | 99.79 | |
| 3dnp_A | 290 | Stress response protein YHAX; structural PSI-2, pr | 99.79 | |
| 3mn1_A | 189 | Probable YRBI family phosphatase; structural genom | 99.79 | |
| 1k1e_A | 180 | Deoxy-D-mannose-octulosonate 8-phosphate phosphat; | 99.79 | |
| 3bwv_A | 180 | Putative 5'(3')-deoxyribonucleotidase; NP_764060.1 | 99.78 | |
| 3n07_A | 195 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; | 99.78 | |
| 3n1u_A | 191 | Hydrolase, HAD superfamily, subfamily III A; struc | 99.77 | |
| 3zvl_A | 416 | Bifunctional polynucleotide phosphatase/kinase; hy | 99.75 | |
| 4dw8_A | 279 | Haloacid dehalogenase-like hydrolase; HAD, putativ | 99.75 | |
| 2r8e_A | 188 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphata | 99.73 | |
| 3mpo_A | 279 | Predicted hydrolase of the HAD superfamily; SGX, P | 99.73 | |
| 3fzq_A | 274 | Putative hydrolase; YP_001086940.1, putative haloa | 99.73 | |
| 1wr8_A | 231 | Phosphoglycolate phosphatase; alpha / beta core do | 99.72 | |
| 2rbk_A | 261 | Putative uncharacterized protein; HAD-like phospha | 99.7 | |
| 3dao_A | 283 | Putative phosphatse; structural genomics, joint ce | 99.7 | |
| 2pq0_A | 258 | Hypothetical conserved protein GK1056; hyopthetica | 99.66 | |
| 3ewi_A | 168 | N-acylneuraminate cytidylyltransferase; beta barre | 99.66 | |
| 3nvb_A | 387 | Uncharacterized protein; protein FKBH, protein fkb | 99.64 | |
| 2i33_A | 258 | Acid phosphatase; HAD superfamily, hydrolase; 1.57 | 99.64 | |
| 3l7y_A | 304 | Putative uncharacterized protein SMU.1108C; hydrol | 99.63 | |
| 1rlm_A | 271 | Phosphatase; HAD family, rossman fold, hydrolase; | 99.62 | |
| 3r4c_A | 268 | Hydrolase, haloacid dehalogenase-like hydrolase; h | 99.61 | |
| 3pgv_A | 285 | Haloacid dehalogenase-like hydrolase; structural g | 99.61 | |
| 3kc2_A | 352 | Uncharacterized protein YKR070W; HAD-like, mitocho | 99.59 | |
| 1l6r_A | 227 | Hypothetical protein TA0175; structural genomics, | 99.58 | |
| 1ltq_A | 301 | Polynucleotide kinase; phosphatase, alpha/beta, P- | 99.55 | |
| 1nrw_A | 288 | Hypothetical protein, haloacid dehalogenase-like h | 99.52 | |
| 1rkq_A | 282 | Hypothetical protein YIDA; two domain structure wi | 99.46 | |
| 1nf2_A | 268 | Phosphatase; structural proteomics, HAD NEW fold, | 99.46 | |
| 1y8a_A | 332 | Hypothetical protein AF1437; structural genomics, | 99.41 | |
| 3ocu_A | 262 | Lipoprotein E; hydrolase, outer membrane; HET: NMN | 99.37 | |
| 2b30_A | 301 | Pvivax hypothetical protein; SGPP, structural geno | 99.37 | |
| 3zx4_A | 259 | MPGP, mannosyl-3-phosphoglycerate phosphatase; hyd | 99.36 | |
| 2jc9_A | 555 | Cytosolic purine 5'-nucleotidase; cytosolic 5-prim | 99.36 | |
| 3pct_A | 260 | Class C acid phosphatase; hydrolase, outer membran | 99.33 | |
| 2hhl_A | 195 | CTD small phosphatase-like protein; CTD phosphatas | 99.13 | |
| 4fe3_A | 297 | Cytosolic 5'-nucleotidase 3; substrate complex, HA | 99.11 | |
| 4gxt_A | 385 | A conserved functionally unknown protein; structur | 99.09 | |
| 2ght_A | 181 | Carboxy-terminal domain RNA polymerase II polypept | 99.01 | |
| 4g63_A | 470 | Cytosolic IMP-GMP specific 5'-nucleotidase; struct | 98.88 | |
| 1xvi_A | 275 | MPGP, YEDP, putative mannosyl-3-phosphoglycerate p | 98.88 | |
| 3j08_A | 645 | COPA, copper-exporting P-type ATPase A; copper tra | 98.87 | |
| 3j09_A | 723 | COPA, copper-exporting P-type ATPase A; copper tra | 98.78 | |
| 4as2_A | 327 | Phosphorylcholine phosphatase; hydrolase, HAD supe | 98.69 | |
| 3ar4_A | 995 | Sarcoplasmic/endoplasmic reticulum calcium ATPase; | 98.61 | |
| 3rfu_A | 736 | Copper efflux ATPase; alpha helical, CPC, CXXC, AT | 98.56 | |
| 3qle_A | 204 | TIM50P; chaperone, mitochondrion, preprotein trans | 98.44 | |
| 2zos_A | 249 | MPGP, mannosyl-3-phosphoglycerate phosphatase; hal | 98.39 | |
| 2zxe_A | 1028 | Na, K-ATPase alpha subunit; membrane protein, ION | 98.39 | |
| 3ef0_A | 372 | RNA polymerase II subunit A C-terminal domain phos | 98.38 | |
| 3ixz_A | 1034 | Potassium-transporting ATPase alpha; ION pump, H+, | 98.33 | |
| 1s2o_A | 244 | SPP, sucrose-phosphatase; phosphohydrolase, HAD su | 98.26 | |
| 1mhs_A | 920 | Proton pump, plasma membrane ATPase; ION transport | 98.26 | |
| 3b8c_A | 885 | ATPase 2, plasma membrane-type; P-type ATPase, pro | 98.21 | |
| 2obb_A | 142 | Hypothetical protein; structural genomics, PSI-2, | 98.13 | |
| 3f9r_A | 246 | Phosphomannomutase; trypanosome glycobiology struc | 98.04 | |
| 1xpj_A | 126 | Hypothetical protein; structural genomics, MCSG, p | 97.96 | |
| 3shq_A | 320 | UBLCP1; phosphatase, hydrolase; 1.96A {Drosophila | 97.74 | |
| 2fue_A | 262 | PMM 1, PMMH-22, phosphomannomutase 1; enzyme-produ | 97.57 | |
| 2zos_A | 249 | MPGP, mannosyl-3-phosphoglycerate phosphatase; hal | 97.4 | |
| 2amy_A | 246 | PMM 2, phosphomannomutase 2; HS.459855, HS.313504, | 97.24 | |
| 2fue_A | 262 | PMM 1, PMMH-22, phosphomannomutase 1; enzyme-produ | 96.8 | |
| 1u02_A | 239 | Trehalose-6-phosphate phosphatase related protein; | 96.78 | |
| 2amy_A | 246 | PMM 2, phosphomannomutase 2; HS.459855, HS.313504, | 96.72 | |
| 1s2o_A | 244 | SPP, sucrose-phosphatase; phosphohydrolase, HAD su | 96.03 | |
| 3kc2_A | 352 | Uncharacterized protein YKR070W; HAD-like, mitocho | 95.88 | |
| 1u02_A | 239 | Trehalose-6-phosphate phosphatase related protein; | 95.87 | |
| 3geb_A | 274 | EYES absent homolog 2; hydrolase, activator, alter | 95.43 | |
| 3ef1_A | 442 | RNA polymerase II subunit A C-terminal domain phos | 95.17 | |
| 2hx1_A | 284 | Predicted sugar phosphatases of the HAD superfamil | 94.57 | |
| 1zjj_A | 263 | Hypothetical protein PH1952; alpha/beta hydrolase | 93.95 | |
| 3f9r_A | 246 | Phosphomannomutase; trypanosome glycobiology struc | 92.6 | |
| 2q5c_A | 196 | NTRC family transcriptional regulator; structural | 90.67 | |
| 1qyi_A | 384 | ZR25, hypothetical protein; structural genomics, P | 90.59 | |
| 3pdw_A | 266 | Uncharacterized hydrolase YUTF; structural genomic | 89.92 | |
| 3qgm_A | 268 | P-nitrophenyl phosphatase (PHO2); structural genom | 89.76 | |
| 3epr_A | 264 | Hydrolase, haloacid dehalogenase-like family; stru | 89.68 | |
| 2hhl_A | 195 | CTD small phosphatase-like protein; CTD phosphatas | 87.36 | |
| 2ght_A | 181 | Carboxy-terminal domain RNA polymerase II polypept | 85.07 | |
| 2pju_A | 225 | Propionate catabolism operon regulatory protein; s | 84.26 | |
| 2nn4_A | 72 | Hypothetical protein YQGQ; novel fold, PFAM:DUF910 | 83.19 | |
| 2oyc_A | 306 | PLP phosphatase, pyridoxal phosphate phosphatase; | 82.15 | |
| 1rkq_A | 282 | Hypothetical protein YIDA; two domain structure wi | 80.52 |
| >3l5k_A Protein GS1, haloacid dehalogenase-like hydrolase domain- containing protein 1A; HDHD1A, haloacid dehalogenase-like hydrolase domain containing 1A; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-37 Score=238.30 Aligned_cols=222 Identities=51% Similarity=0.886 Sum_probs=197.1
Q ss_pred CCCccEEEEecCcccccchhhHHHHHHHHHHHcCCCCCHHHHHHhcCCChHHHHHHHHHHhCCCCCCCHHHHHHHHHHHH
Q 026543 7 KKPITHVIFDMDGLLLDTEKFYTEVQELILARYNKTFDWSLKAKMMGKKAIEAAQVFVEETGISDKLSAEDFLVQREETL 86 (237)
Q Consensus 7 ~~~~~~vifD~DGTL~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (237)
++++|+|+||+||||+++...+...+.++++++|.....+....+.+.+.....+.+.+.++.. ...+.+...+...+
T Consensus 27 ~~~ik~i~fDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~ 104 (250)
T 3l5k_A 27 PQPVTHLIFDMDGLLLDTERLYSVVFQEICNRYDKKYSWDVKSLVMGKKALEAAQIIIDVLQLP--MSKEELVEESQTKL 104 (250)
T ss_dssp CCCCSEEEEETBTTTBCHHHHHHHHHHHHHHHTTCCCCHHHHHHHTTCCHHHHHHHHHHHHTCS--SCHHHHHHHHHHHH
T ss_pred ccCCcEEEEcCCCCcCCCHHHHHHHHHHHHHHhCCCCCHHHHHHhcCCCHHHHHHHHHHHhCCC--CCHHHHHHHHHHHH
Confidence 3568999999999999999999999999999999998888888888999998899999998887 77788887777777
Q ss_pred HhhcCCCCCCccHHHHHHHHHhCCCCEEEEeCChhhHHHHHHhhhhhhhhhcceeeeCCCCCccCCCCCHHHHHHHHHHc
Q 026543 87 QTLFPTSELMPGASHLIRHLHAKGIPMCVATGSLARHFELKTQKHRELFSLMHHVVRGDDPEVKQGKPSPDIFLAAAKRF 166 (237)
Q Consensus 87 ~~~~~~~~~~~~~~~~l~~l~~~g~~v~i~s~~~~~~~~~~~~~~~gl~~~f~~~~~~~~~~~~~~kp~~~~~~~~l~~~ 166 (237)
.+......++||+.++++.|+++|++++++||+........+.+..|+..+|+.++++++...+..||++..|..+++++
T Consensus 105 ~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~sn~~~~~~~~~l~~~~~l~~~f~~~~~~~~~~~~~~Kp~~~~~~~~~~~l 184 (250)
T 3l5k_A 105 KEVFPTAALMPGAEKLIIHLRKHGIPFALATSSRSASFDMKTSRHKEFFSLFSHIVLGDDPEVQHGKPDPDIFLACAKRF 184 (250)
T ss_dssp HHHGGGCCBCTTHHHHHHHHHHTTCCEEEECSCCHHHHHHHTTTCHHHHTTSSCEECTTCTTCCSCTTSTHHHHHHHHTS
T ss_pred HHHhccCCCCCCHHHHHHHHHhCCCcEEEEeCCCHHHHHHHHHhccCHHhheeeEEecchhhccCCCCChHHHHHHHHHc
Confidence 77777789999999999999999999999999876666655555678999999998876334568899999999999999
Q ss_pred CCCCCCC--CcEEEEecCHHHHHHHHHcCCeEEEEcCCCCCcccccchhhhhhhhcccCCCCCCCCCCC
Q 026543 167 EGGPIDS--QEILVFEDAPSGVLAAKNAGMSVVMVPDPRLDSSYHSNADQLLSSLLGFNPKDWGLPPFE 233 (237)
Q Consensus 167 ~~~~~~~--~~~~~igD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~~~~el~~~l~~l~~~~ 233 (237)
| ++| ++|++|||+.+|+++|+.+|+.+++|.+++........++++++++.|+.+.+.+|+++.
T Consensus 185 g---i~~~~~~~i~iGD~~~Di~~a~~aG~~~i~v~~~~~~~~~~~~ad~v~~sl~el~~~l~~l~~~~ 250 (250)
T 3l5k_A 185 S---PPPAMEKCLVFEDAPNGVEAALAAGMQVVMVPDGNLSRDLTTKATLVLNSLQDFQPELFGLPSYE 250 (250)
T ss_dssp S---SCCCGGGEEEEESSHHHHHHHHHTTCEEEECCCTTSCGGGSTTSSEECSCGGGCCGGGGTCCCCC
T ss_pred C---CCCCcceEEEEeCCHHHHHHHHHcCCEEEEEcCCCCchhhcccccEeecCHHHhhHHHhcCCCCC
Confidence 9 988 999999999999999999999999999988776678899999999999999999999873
|
| >4g9b_A Beta-PGM, beta-phosphoglucomutase; HAD, putative phosphoglucomutase, enzyme function initiative structural genomics, isomerase; 1.70A {Escherichia coli} | Back alignment and structure |
|---|
Probab=100.00 E-value=9.9e-38 Score=238.15 Aligned_cols=220 Identities=23% Similarity=0.334 Sum_probs=170.3
Q ss_pred CCCccEEEEecCcccccchhhHHHHHHHHHHHcCCCCCHHHHHHhcCCChHHHHHHHHHHhCCCCCCCHHHHHHHH---H
Q 026543 7 KKPITHVIFDMDGLLLDTEKFYTEVQELILARYNKTFDWSLKAKMMGKKAIEAAQVFVEETGISDKLSAEDFLVQR---E 83 (237)
Q Consensus 7 ~~~~~~vifD~DGTL~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~ 83 (237)
+|++|+|+||+||||+|+...+..++.++++++|++.+.+....+.|.+..+.++.+....+.............. .
T Consensus 2 ~MkiKaViFDlDGTL~Ds~~~~~~a~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (243)
T 4g9b_A 2 VMKLQGVIFDLDGVITDTAHLHFQAWQQIAAEIGISIDAQFNESLKGISRDESLRRILQHGGKEGDFNSQERAQLAYRKN 81 (243)
T ss_dssp CCCCCEEEECSBTTTBCCHHHHHHHHHHHHHHTTCCCCTTGGGGGTTCCHHHHHHHHHHHTTCGGGCCHHHHHHHHHHHH
T ss_pred CccCcEEEEcCCCcccCCHHHHHHHHHHHHHHcCCCCCHHHHHHHcCCCHHHHHHHHHHHhhcccchhHHHHHHHHHHHH
Confidence 3568999999999999999999999999999999988888778888889988898888887765434443332221 1
Q ss_pred HHHHhh---cCCCCCCccHHHHHHHHHhCCCCEEEEeCChhhHHHHHHhhhhhhhhhcceeeeCCCCCccCCCCCHHHHH
Q 026543 84 ETLQTL---FPTSELMPGASHLIRHLHAKGIPMCVATGSLARHFELKTQKHRELFSLMHHVVRGDDPEVKQGKPSPDIFL 160 (237)
Q Consensus 84 ~~~~~~---~~~~~~~~~~~~~l~~l~~~g~~v~i~s~~~~~~~~~~~~~~~gl~~~f~~~~~~~~~~~~~~kp~~~~~~ 160 (237)
..+... .....++||+.++++.|+++|++++++||+... ...++.+|+..+|+.+++++ +.+.+||+|+.|.
T Consensus 82 ~~~~~~~~~~~~~~~~pg~~~ll~~L~~~g~~i~i~t~~~~~---~~~l~~~gl~~~fd~i~~~~--~~~~~KP~p~~~~ 156 (243)
T 4g9b_A 82 LLYVHSLRELTVNAVLPGIRSLLADLRAQQISVGLASVSLNA---PTILAALELREFFTFCADAS--QLKNSKPDPEIFL 156 (243)
T ss_dssp HHHHHHHHTCCGGGBCTTHHHHHHHHHHTTCEEEECCCCTTH---HHHHHHTTCGGGCSEECCGG--GCSSCTTSTHHHH
T ss_pred HHHHHHHHhcccccccccHHHHHHhhhcccccceecccccch---hhhhhhhhhccccccccccc--cccCCCCcHHHHH
Confidence 111111 223468999999999999999999999986543 24578889999999999999 8899999999999
Q ss_pred HHHHHcCCCCCCCCcEEEEecCHHHHHHHHHcCCeEEEEcCCCCC--cccccchhhhhhhhccc--------------CC
Q 026543 161 AAAKRFEGGPIDSQEILVFEDAPSGVLAAKNAGMSVVMVPDPRLD--SSYHSNADQLLSSLLGF--------------NP 224 (237)
Q Consensus 161 ~~l~~~~~~~~~~~~~~~igD~~~Di~~a~~~G~~~i~v~~~~~~--~~~~~~~~~~~~~~~el--------------~~ 224 (237)
.+++++| ++|++|++|||+.+|+++|+++|+.+|+|.++... ......++..++++.++ .+
T Consensus 157 ~a~~~lg---~~p~e~l~VgDs~~di~aA~~aG~~~I~V~~g~~~ad~~~~~~~~l~~~~l~~~~~~l~~~l~~~~~~~~ 233 (243)
T 4g9b_A 157 AACAGLG---VPPQACIGIEDAQAGIDAINASGMRSVGIGAGLTGAQLLLPSTESLTWPRLSAFWQNVAENLYFQSHHHH 233 (243)
T ss_dssp HHHHHHT---SCGGGEEEEESSHHHHHHHHHHTCEEEEESTTCCSCSEEESSGGGCCHHHHHHHHHHHSCCGGGC-----
T ss_pred HHHHHcC---CChHHEEEEcCCHHHHHHHHHcCCEEEEECCCCCcHHHhcCChhhcCHHHHHHHHHHHHHHhhhhhhhcc
Confidence 9999999 99999999999999999999999999999988663 23456677777777765 56
Q ss_pred CCCCCCCCCC
Q 026543 225 KDWGLPPFED 234 (237)
Q Consensus 225 ~l~~l~~~~~ 234 (237)
..|++|||+.
T Consensus 234 ~~~~~p~~~~ 243 (243)
T 4g9b_A 234 HHWSHPQFEK 243 (243)
T ss_dssp ----------
T ss_pred ccCCCCCCCC
Confidence 7799999873
|
| >3kbb_A Phosphorylated carbohydrates phosphatase TM_1254; hydrolase, arbohydrate metabolism, COBA magnesium, manganese, metal-binding, nickel; HET: MSE GOL; 1.74A {Thermotoga maritima MSB8} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-34 Score=217.28 Aligned_cols=187 Identities=31% Similarity=0.486 Sum_probs=160.5
Q ss_pred ccEEEEecCcccccchhhHHHHHHHHHHHcCCCCCHHHHHHhcCCChHHHHHHHHHHhCCCCCCCHHHHHHHHHHHH-Hh
Q 026543 10 ITHVIFDMDGLLLDTEKFYTEVQELILARYNKTFDWSLKAKMMGKKAIEAAQVFVEETGISDKLSAEDFLVQREETL-QT 88 (237)
Q Consensus 10 ~~~vifD~DGTL~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 88 (237)
||+|+||+||||+|+...+..++.++++++|.+.+.+......+.+............... ...+.+.......+ ..
T Consensus 1 IkAViFD~DGTL~ds~~~~~~a~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~ 78 (216)
T 3kbb_A 1 MEAVIFDMDGVLMDTEPLYFEAYRRVAESYGKPYTEDLHRRIMGVPEREGLPILMEALEIK--DSLENFKKRVHEEKKRV 78 (216)
T ss_dssp CCEEEEESBTTTBCCGGGHHHHHHHHHHHTTCCCCHHHHHHHTTSCHHHHHHHHHHHTTCC--SCHHHHHHHHHHHHHHH
T ss_pred CeEEEECCCCcccCCHHHHHHHHHHHHHHcCCCCCHHHHHHHhccchhhhhhhhhhcccch--hhHHHHHHHHHHHHHHH
Confidence 5899999999999999999999999999999999988888888888888888888877666 55555544433332 22
Q ss_pred hcCCCCCCccHHHHHHHHHhCCCCEEEEeCChhhHHHHHHhhhhhhhhhcceeeeCCCCCccCCCCCHHHHHHHHHHcCC
Q 026543 89 LFPTSELMPGASHLIRHLHAKGIPMCVATGSLARHFELKTQKHRELFSLMHHVVRGDDPEVKQGKPSPDIFLAAAKRFEG 168 (237)
Q Consensus 89 ~~~~~~~~~~~~~~l~~l~~~g~~v~i~s~~~~~~~~~~~~~~~gl~~~f~~~~~~~~~~~~~~kp~~~~~~~~l~~~~~ 168 (237)
......++||+.++++.|+++|++++++||+...... ..++.+|+..+||.+++++ +.+..||+|+.|..+++++|
T Consensus 79 ~~~~~~~~pg~~~~l~~L~~~g~~~~i~tn~~~~~~~-~~l~~~~l~~~fd~~~~~~--~~~~~KP~p~~~~~a~~~lg- 154 (216)
T 3kbb_A 79 FSELLKENPGVREALEFVKSKRIKLALATSTPQREAL-ERLRRLDLEKYFDVMVFGD--QVKNGKPDPEIYLLVLERLN- 154 (216)
T ss_dssp HHHHCCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHH-HHHHHTTCGGGCSEEECGG--GSSSCTTSTHHHHHHHHHHT-
T ss_pred HHHhcccCccHHHHHHHHHHcCCCcccccCCcHHHHH-HHHHhcCCCcccccccccc--ccCCCcccHHHHHHHHHhhC-
Confidence 3334678999999999999999999999997776555 4678889999999999999 89999999999999999999
Q ss_pred CCCCCCcEEEEecCHHHHHHHHHcCCeEEE-EcCCCC
Q 026543 169 GPIDSQEILVFEDAPSGVLAAKNAGMSVVM-VPDPRL 204 (237)
Q Consensus 169 ~~~~~~~~~~igD~~~Di~~a~~~G~~~i~-v~~~~~ 204 (237)
++|++|+||||+.+|+++|+++||++|+ |.++..
T Consensus 155 --~~p~e~l~VgDs~~Di~aA~~aG~~~i~~v~~g~~ 189 (216)
T 3kbb_A 155 --VVPEKVVVFEDSKSGVEAAKSAGIERIYGVVHSLN 189 (216)
T ss_dssp --CCGGGEEEEECSHHHHHHHHHTTCCCEEEECCSSS
T ss_pred --CCccceEEEecCHHHHHHHHHcCCcEEEEecCCCC
Confidence 9999999999999999999999999985 777655
|
| >4gib_A Beta-phosphoglucomutase; rossmann fold, HAD-like, structural genomics, center for structural genomics of infectious DISE csgid, isomerase; 2.27A {Clostridium difficile} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-34 Score=220.27 Aligned_cols=205 Identities=20% Similarity=0.317 Sum_probs=166.8
Q ss_pred CCCccEEEEecCcccccchhhHHHHHHHHHHHcCCCCCHHHHHHhcCCChHHHHHHHHHHhCCCCCCCHHHHHH---HHH
Q 026543 7 KKPITHVIFDMDGLLLDTEKFYTEVQELILARYNKTFDWSLKAKMMGKKAIEAAQVFVEETGISDKLSAEDFLV---QRE 83 (237)
Q Consensus 7 ~~~~~~vifD~DGTL~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~ 83 (237)
..|+|+|+||+||||+|+...+..+|.++++++|++.+.+....+.+.+..+..+.+................. ...
T Consensus 23 ~~MIKaViFDlDGTLvDs~~~~~~a~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 102 (250)
T 4gib_A 23 NAMIEAFIFDLDGVITDTAYYHYMAWRKLAHKVGIDIDTKFNESLKGISRMESLDRILEFGNKKYSFSEEEKVRMAEEKN 102 (250)
T ss_dssp -CCCCEEEECTBTTTBCCHHHHHHHHHHHHHTTTCCCCTTGGGGTTTCCHHHHHHHHHHHTTCTTTSCHHHHHHHHHHHH
T ss_pred cchhheeeecCCCcccCCHHHHHHHHHHHHHHcCCCCCHHHHHHHhCcchHHHHHHhhhhhcCCCCCCHHHHHHHHHHHH
Confidence 34689999999999999999999999999999999888777777778888888888877665543344333322 233
Q ss_pred HHHHhhc---CCCCCCccHHHHHHHHHhCCCCEEEEeCChhhHHHHHHhhhhhhhhhcceeeeCCCCCccCCCCCHHHHH
Q 026543 84 ETLQTLF---PTSELMPGASHLIRHLHAKGIPMCVATGSLARHFELKTQKHRELFSLMHHVVRGDDPEVKQGKPSPDIFL 160 (237)
Q Consensus 84 ~~~~~~~---~~~~~~~~~~~~l~~l~~~g~~v~i~s~~~~~~~~~~~~~~~gl~~~f~~~~~~~~~~~~~~kp~~~~~~ 160 (237)
..+.... ....++||+.++++.|+++|+++++.|++.. .. ..++..|+..+|+.+++++ +.+..||+|+.|.
T Consensus 103 ~~~~~~~~~~~~~~~~p~~~~ll~~Lk~~g~~i~i~~~~~~--~~-~~L~~~gl~~~Fd~i~~~~--~~~~~KP~p~~~~ 177 (250)
T 4gib_A 103 NYYVSLIDEITSNDILPGIESLLIDVKSNNIKIGLSSASKN--AI-NVLNHLGISDKFDFIADAG--KCKNNKPHPEIFL 177 (250)
T ss_dssp HHHHHHHTTCCGGGSCTTHHHHHHHHHHTTCEEEECCSCTT--HH-HHHHHHTCGGGCSEECCGG--GCCSCTTSSHHHH
T ss_pred HHHHHHHhhccccccchhHHHHHHHHHhcccccccccccch--hh-hHhhhcccccccceeeccc--ccCCCCCcHHHHH
Confidence 3333332 2356899999999999999999998877433 22 4578889999999999999 8899999999999
Q ss_pred HHHHHcCCCCCCCCcEEEEecCHHHHHHHHHcCCeEEEEcCCCCCcccccchhhhhhhhcccC
Q 026543 161 AAAKRFEGGPIDSQEILVFEDAPSGVLAAKNAGMSVVMVPDPRLDSSYHSNADQLLSSLLGFN 223 (237)
Q Consensus 161 ~~l~~~~~~~~~~~~~~~igD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~~~~el~ 223 (237)
.+++++| ++|++|+||||+.+|+++|+++|+.+|+|.+... ...|+++++++.||.
T Consensus 178 ~a~~~lg---~~p~e~l~VGDs~~Di~aA~~aG~~~i~v~~~~~----~~~ad~vi~~l~eL~ 233 (250)
T 4gib_A 178 MSAKGLN---VNPQNCIGIEDASAGIDAINSANMFSVGVGNYEN----LKKANLVVDSTNQLK 233 (250)
T ss_dssp HHHHHHT---CCGGGEEEEESSHHHHHHHHHTTCEEEEESCTTT----TTTSSEEESSGGGCC
T ss_pred HHHHHhC---CChHHeEEECCCHHHHHHHHHcCCEEEEECChhH----hccCCEEECChHhCC
Confidence 9999999 9999999999999999999999999999965433 346899999999984
|
| >3e58_A Putative beta-phosphoglucomutase; structu genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.86A {Streptococcus thermophilus lmg 18311} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-34 Score=214.38 Aligned_cols=209 Identities=22% Similarity=0.367 Sum_probs=177.8
Q ss_pred CCccEEEEecCcccccchhhHHHHHHHHHHHcCCCCCHHHHHHhcCCChHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHH
Q 026543 8 KPITHVIFDMDGLLLDTEKFYTEVQELILARYNKTFDWSLKAKMMGKKAIEAAQVFVEETGISDKLSAEDFLVQREETLQ 87 (237)
Q Consensus 8 ~~~~~vifD~DGTL~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (237)
+++|+|+||+||||+++...+...+..+++++|.....+......+.+.....+.+....+.. .....+...+...+.
T Consensus 3 ~m~k~i~fDlDGTL~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~ 80 (214)
T 3e58_A 3 AMVEAIIFDMDGVLFDTEKYYYDRRASFLGQKGISIDHLPPSFFIGGNTKQVWENILRDEYDK--WDVSTLQEEYNTYKQ 80 (214)
T ss_dssp -CCCEEEEESBTTTBCCHHHHHHHHHHHHHHTTCCCTTSCHHHHTTSCGGGCHHHHHGGGGGG--SCHHHHHHHHHHHHH
T ss_pred ccccEEEEcCCCCccccHHHHHHHHHHHHHHcCCCCCHHHHHHHcCCCHHHHHHHHHHhhcCC--CCHHHHHHHHHHHHH
Confidence 358999999999999999999999999999999987777777888888887777887776655 566777766666665
Q ss_pred hhcC--CCCCCccHHHHHHHHHhCCCCEEEEeCChhhHHHHHHhhhhhhhhhcceeeeCCCCCccCCCCCHHHHHHHHHH
Q 026543 88 TLFP--TSELMPGASHLIRHLHAKGIPMCVATGSLARHFELKTQKHRELFSLMHHVVRGDDPEVKQGKPSPDIFLAAAKR 165 (237)
Q Consensus 88 ~~~~--~~~~~~~~~~~l~~l~~~g~~v~i~s~~~~~~~~~~~~~~~gl~~~f~~~~~~~~~~~~~~kp~~~~~~~~l~~ 165 (237)
.... ...++|++.++++.|+++|++++++||+...... ..++.+|+..+|+.+++++ ..+..||++..+..++++
T Consensus 81 ~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~-~~l~~~~l~~~f~~~~~~~--~~~~~kp~~~~~~~~~~~ 157 (214)
T 3e58_A 81 NNPLPYKELIFPDVLKVLNEVKSQGLEIGLASSSVKADIF-RALEENRLQGFFDIVLSGE--EFKESKPNPEIYLTALKQ 157 (214)
T ss_dssp HSCCCHHHHBCTTHHHHHHHHHHTTCEEEEEESSCHHHHH-HHHHHTTCGGGCSEEEEGG--GCSSCTTSSHHHHHHHHH
T ss_pred HhhcccCCCcCchHHHHHHHHHHCCCCEEEEeCCcHHHHH-HHHHHcCcHhheeeEeecc--cccCCCCChHHHHHHHHH
Confidence 5433 2468999999999999999999999997665554 5678889999999999999 888999999999999999
Q ss_pred cCCCCCCCCcEEEEecCHHHHHHHHHcCCeEEEEcCCCCCcccccchhhhhhhhcccCCC
Q 026543 166 FEGGPIDSQEILVFEDAPSGVLAAKNAGMSVVMVPDPRLDSSYHSNADQLLSSLLGFNPK 225 (237)
Q Consensus 166 ~~~~~~~~~~~~~igD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~~~~el~~~ 225 (237)
+| ++|++|++|||+.+|+++|+.+|+.++++..+..... ...++++++++.|+...
T Consensus 158 ~~---~~~~~~~~iGD~~~Di~~a~~aG~~~~~~~~~~~~~~-~~~a~~~~~~~~el~~~ 213 (214)
T 3e58_A 158 LN---VQASRALIIEDSEKGIAAGVAADVEVWAIRDNEFGMD-QSAAKGLLDSLTDVLDL 213 (214)
T ss_dssp HT---CCGGGEEEEECSHHHHHHHHHTTCEEEEECCSSSCCC-CTTSSEEESSGGGGGGG
T ss_pred cC---CChHHeEEEeccHhhHHHHHHCCCEEEEECCCCccch-hccHHHHHHHHHHHHhh
Confidence 99 9999999999999999999999999999987644332 47899999999998654
|
| >3s6j_A Hydrolase, haloacid dehalogenase-like family; structural genomics, PSI-2; 2.20A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-34 Score=217.51 Aligned_cols=215 Identities=26% Similarity=0.263 Sum_probs=177.3
Q ss_pred CCCccEEEEecCcccccchhhHHHHHHHHHHHcCCCCCHHHHHHhcCCChHHHHHHHHHHhCCCCCCCHHHHHHHHH---
Q 026543 7 KKPITHVIFDMDGLLLDTEKFYTEVQELILARYNKTFDWSLKAKMMGKKAIEAAQVFVEETGISDKLSAEDFLVQRE--- 83 (237)
Q Consensus 7 ~~~~~~vifD~DGTL~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 83 (237)
|+++|+|+||+||||+++...+...+..+++++|.......+....+.+.....+.+...++.. ...+.+.....
T Consensus 3 ~~~~k~i~fDlDGTL~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~ 80 (233)
T 3s6j_A 3 LRPQTSFIFDLDGTLTDSVYQNVAAWKEALDAENIPLAMWRIHRKIGMSGGLMLKSLSRETGMS--ITDEQAERLSEKHA 80 (233)
T ss_dssp --CCCEEEECCBTTTEECHHHHHHHHHHHHHHTTCCCCHHHHHHHTTSCHHHHHHHHHHC------CCHHHHHHHHHHHH
T ss_pred CCcCcEEEEcCCCccccChHHHHHHHHHHHHHcCCCCCHHHHHHHcCCcHHHHHHHHHHhcCCC--CCHHHHHHHHHHHH
Confidence 4568999999999999999999999999999999998888888888888888888888777765 55555544433
Q ss_pred HHHHhhcCCCCCCccHHHHHHHHHhCCCCEEEEeCChhhHHHHHHhhhhhhhhhcceeeeCCCCCccCCCCCHHHHHHHH
Q 026543 84 ETLQTLFPTSELMPGASHLIRHLHAKGIPMCVATGSLARHFELKTQKHRELFSLMHHVVRGDDPEVKQGKPSPDIFLAAA 163 (237)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~l~~l~~~g~~v~i~s~~~~~~~~~~~~~~~gl~~~f~~~~~~~~~~~~~~kp~~~~~~~~l 163 (237)
..+........+++++.++++.|+++|++++++||+...... ..++..|+..+|+.+++++ ..+..||++..+..++
T Consensus 81 ~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~-~~l~~~~l~~~f~~~~~~~--~~~~~kp~~~~~~~~~ 157 (233)
T 3s6j_A 81 QAYERLQHQIIALPGAVELLETLDKENLKWCIATSGGIDTAT-INLKALKLDINKINIVTRD--DVSYGKPDPDLFLAAA 157 (233)
T ss_dssp HHHHHTGGGCEECTTHHHHHHHHHHTTCCEEEECSSCHHHHH-HHHHTTTCCTTSSCEECGG--GSSCCTTSTHHHHHHH
T ss_pred HHHHHhhccCccCCCHHHHHHHHHHCCCeEEEEeCCchhhHH-HHHHhcchhhhhheeeccc--cCCCCCCChHHHHHHH
Confidence 333334455789999999999999999999999997665544 5678889999999999998 8888999999999999
Q ss_pred HHcCCCCCCCCcEEEEecCHHHHHHHHHcCCeEEEEcCCCCCc--ccccchhhhhhhhcccCCCCCCC
Q 026543 164 KRFEGGPIDSQEILVFEDAPSGVLAAKNAGMSVVMVPDPRLDS--SYHSNADQLLSSLLGFNPKDWGL 229 (237)
Q Consensus 164 ~~~~~~~~~~~~~~~igD~~~Di~~a~~~G~~~i~v~~~~~~~--~~~~~~~~~~~~~~el~~~l~~l 229 (237)
+++| ++|++|++|||+.+|+++|+.+|+.+++|.++.... .....++++++++.|+...+.+.
T Consensus 158 ~~l~---~~~~~~i~iGD~~~Di~~a~~aG~~~i~v~~g~~~~~~l~~~~ad~v~~~~~el~~~l~~~ 222 (233)
T 3s6j_A 158 KKIG---APIDECLVIGDAIWDMLAARRCKATGVGLLSGGYDIGELERAGALRVYEDPLDLLNHLDEI 222 (233)
T ss_dssp HHTT---CCGGGEEEEESSHHHHHHHHHTTCEEEEEGGGSCCHHHHHHTTCSEEESSHHHHHHTGGGT
T ss_pred HHhC---CCHHHEEEEeCCHHhHHHHHHCCCEEEEEeCCCCchHhHHhcCCCEEECCHHHHHHHHHHH
Confidence 9999 999999999999999999999999999999875532 22345999999999998777544
|
| >4ex6_A ALNB; modified rossman fold, phosphatase, magnesium binding, hydro; 1.25A {Streptomyces SP} PDB: 4ex7_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-34 Score=217.94 Aligned_cols=213 Identities=19% Similarity=0.227 Sum_probs=171.6
Q ss_pred CCCCccEEEEecCcccccchhhHHHHHHHHHHHcCCCCCHHHHHHhcCCChHHHHHHHHHHhCCCCCCCHHHHHHHHHHH
Q 026543 6 SKKPITHVIFDMDGLLLDTEKFYTEVQELILARYNKTFDWSLKAKMMGKKAIEAAQVFVEETGISDKLSAEDFLVQREET 85 (237)
Q Consensus 6 ~~~~~~~vifD~DGTL~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (237)
.++++|+|+||+||||+++...+...+..+++++|.....+.+....+.+.....+.+....... .....+...+...
T Consensus 15 ~~~~ik~i~fDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~ 92 (237)
T 4ex6_A 15 PAAADRGVILDLDGTLADTPAAIATITAEVLAAMGTAVSRGAILSTVGRPLPASLAGLLGVPVED--PRVAEATEEYGRR 92 (237)
T ss_dssp --CCCEEEEECSBTTTBCCHHHHHHHHHHHHHHTTCCCCHHHHHHHTTSCHHHHHHHHHTSCTTS--HHHHHHHHHHHHH
T ss_pred CcccCCEEEEcCCCCCcCCHHHHHHHHHHHHHHcCCCCCHHHHHHhcCccHHHHHHHHhCCCCCH--HHHHHHHHHHHHH
Confidence 35679999999999999999999999999999999767777777888888777666665432211 2223333333333
Q ss_pred HHhhc---CCCCCCccHHHHHHHHHhCCCCEEEEeCChhhHHHHHHhhhhhhhhhcceeeeCCCCCccCCCCCHHHHHHH
Q 026543 86 LQTLF---PTSELMPGASHLIRHLHAKGIPMCVATGSLARHFELKTQKHRELFSLMHHVVRGDDPEVKQGKPSPDIFLAA 162 (237)
Q Consensus 86 ~~~~~---~~~~~~~~~~~~l~~l~~~g~~v~i~s~~~~~~~~~~~~~~~gl~~~f~~~~~~~~~~~~~~kp~~~~~~~~ 162 (237)
+.+.. ....++||+.++++.|+++|++++++||+...... ..++.+|+..+|+.+++++ ..+.+||++..|..+
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~-~~l~~~~l~~~f~~~~~~~--~~~~~kp~~~~~~~~ 169 (237)
T 4ex6_A 93 FGAHVRAAGPRLLYPGVLEGLDRLSAAGFRLAMATSKVEKAAR-AIAELTGLDTRLTVIAGDD--SVERGKPHPDMALHV 169 (237)
T ss_dssp HHHHHHHHGGGGBCTTHHHHHHHHHHTTEEEEEECSSCHHHHH-HHHHHHTGGGTCSEEECTT--TSSSCTTSSHHHHHH
T ss_pred HHHhcccccCCccCCCHHHHHHHHHhCCCcEEEEcCCChHHHH-HHHHHcCchhheeeEEeCC--CCCCCCCCHHHHHHH
Confidence 33332 55789999999999999999999999997765544 5678889999999999999 888999999999999
Q ss_pred HHHcCCCCCCCCcEEEEecCHHHHHHHHHcCCeEEEEcCCCCC-ccc-ccchhhhhhhhcccCCCC
Q 026543 163 AKRFEGGPIDSQEILVFEDAPSGVLAAKNAGMSVVMVPDPRLD-SSY-HSNADQLLSSLLGFNPKD 226 (237)
Q Consensus 163 l~~~~~~~~~~~~~~~igD~~~Di~~a~~~G~~~i~v~~~~~~-~~~-~~~~~~~~~~~~el~~~l 226 (237)
++++| ++|++|++|||+.+|+++|+.+|+.+++|.++... +.. ...++++++++.||...+
T Consensus 170 ~~~lg---~~~~~~i~vGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~ad~v~~~~~el~~~l 232 (237)
T 4ex6_A 170 ARGLG---IPPERCVVIGDGVPDAEMGRAAGMTVIGVSYGVSGPDELMRAGADTVVDSFPAAVTAV 232 (237)
T ss_dssp HHHHT---CCGGGEEEEESSHHHHHHHHHTTCEEEEESSSSSCHHHHHHTTCSEEESSHHHHHHHH
T ss_pred HHHcC---CCHHHeEEEcCCHHHHHHHHHCCCeEEEEecCCCCHHHHHhcCCCEEECCHHHHHHHH
Confidence 99999 99999999999999999999999999999998663 222 347999999999986554
|
| >3qxg_A Inorganic pyrophosphatase; hydrolase, magnesium binding site, NEW YORK research center for structural genomics; HET: TLA; 1.24A {Bacteroides thetaiotaomicron} PDB: 3qu2_A* 3qx7_A 3quq_A* 3r9k_A 3qut_A 3qu9_A* 3qu7_A 3qu5_A 3qyp_A 3quc_A 3qub_A 3qu4_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.9e-34 Score=218.07 Aligned_cols=212 Identities=25% Similarity=0.389 Sum_probs=173.8
Q ss_pred CCCCccEEEEecCcccccchhhHHHHHHHHHHHcCCCCCHHHHHHhcCCChHHHHHHHHH-HhCCCCCCCHHHHHHHHHH
Q 026543 6 SKKPITHVIFDMDGLLLDTEKFYTEVQELILARYNKTFDWSLKAKMMGKKAIEAAQVFVE-ETGISDKLSAEDFLVQREE 84 (237)
Q Consensus 6 ~~~~~~~vifD~DGTL~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 84 (237)
.|+++|+|+||+||||+++...+...+..+++++|.....+......+......+..+.. .++.. ...+.+......
T Consensus 20 ~m~~~k~i~fDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~ 97 (243)
T 3qxg_A 20 MRKKLKAVLFDMDGVLFNSMPYHSEAWHQVMKTHGLDLSREEAYMHEGRTGASTINIVFQRELGKE--ATQEEIESIYHE 97 (243)
T ss_dssp --CCCCEEEECSBTTTBCCHHHHHHHHHHHHHHTTCCCCHHHHHHTTTSCHHHHHHHHHHHHHSSC--CCHHHHHHHHHH
T ss_pred ccccCCEEEEcCCCCCCCCHHHHHHHHHHHHHHhCCCCCHHHHHHHhCCCHHHHHHHHHHHHhCCC--CCHHHHHHHHHH
Confidence 356789999999999999999999999999999999988888777777777766666554 46766 566666655544
Q ss_pred HHHhh--cCCCCCCccHHHHHHHHHhCCCCEEEEeCChhhHHHHHHhhhhhhhhhc--ceeeeCCCCCccCCCCCHHHHH
Q 026543 85 TLQTL--FPTSELMPGASHLIRHLHAKGIPMCVATGSLARHFELKTQKHRELFSLM--HHVVRGDDPEVKQGKPSPDIFL 160 (237)
Q Consensus 85 ~~~~~--~~~~~~~~~~~~~l~~l~~~g~~v~i~s~~~~~~~~~~~~~~~gl~~~f--~~~~~~~~~~~~~~kp~~~~~~ 160 (237)
..... .....++|++.++++.|+++|++++++||+....... .++. ++..+| +.+++++ .....||++..|.
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~-~l~~-~l~~~f~~d~i~~~~--~~~~~kp~~~~~~ 173 (243)
T 3qxg_A 98 KSILFNSYPEAERMPGAWELLQKVKSEGLTPMVVTGSGQLSLLE-RLEH-NFPGMFHKELMVTAF--DVKYGKPNPEPYL 173 (243)
T ss_dssp HHHHHHTSSCCCBCTTHHHHHHHHHHTTCEEEEECCCCCHHHHT-THHH-HSTTTCCGGGEECTT--TCSSCTTSSHHHH
T ss_pred HHHHHHhcccCCCCCCHHHHHHHHHHcCCcEEEEeCCcHHHHHH-HHHH-hHHHhcCcceEEeHH--hCCCCCCChHHHH
Confidence 33322 2347899999999999999999999999977665543 4566 899999 8899999 8889999999999
Q ss_pred HHHHHcCCCCCCCCcEEEEecCHHHHHHHHHcCCeEEEEcCCCCCcc--cccchhhhhhhhcccCCCC
Q 026543 161 AAAKRFEGGPIDSQEILVFEDAPSGVLAAKNAGMSVVMVPDPRLDSS--YHSNADQLLSSLLGFNPKD 226 (237)
Q Consensus 161 ~~l~~~~~~~~~~~~~~~igD~~~Di~~a~~~G~~~i~v~~~~~~~~--~~~~~~~~~~~~~el~~~l 226 (237)
.+++++| ++|++|++|||+.+|+++|+.+|+.+++|.++..... ....++++++++.||...+
T Consensus 174 ~~~~~lg---~~~~~~i~vGD~~~Di~~a~~aG~~~i~v~~~~~~~~~l~~~~ad~v~~s~~el~~~l 238 (243)
T 3qxg_A 174 MALKKGG---LKADEAVVIENAPLGVEAGHKAGIFTIAVNTGPLDGQVLLDAGADLLFPSMQTLCDSW 238 (243)
T ss_dssp HHHHHTT---CCGGGEEEEECSHHHHHHHHHTTCEEEEECCSSSCHHHHHHTTCSEEESCHHHHHHHH
T ss_pred HHHHHcC---CCHHHeEEEeCCHHHHHHHHHCCCEEEEEeCCCCCHHHHHhcCCCEEECCHHHHHHHH
Confidence 9999999 9999999999999999999999999999998765322 2357999999999986543
|
| >2ah5_A COG0546: predicted phosphatases; MCSG, structural genomics, hydrola haloacid dehalogenase-like, PSI; 1.74A {Streptococcus pneumoniae} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=100.00 E-value=3.8e-34 Score=213.67 Aligned_cols=202 Identities=14% Similarity=0.201 Sum_probs=157.2
Q ss_pred CCccEEEEecCcccccchhhHHHHHHHHHHHcCCCC-CHHHHHHhcCCChHHHHHHHHHHhCCCCCCCHHHHHHHHHHHH
Q 026543 8 KPITHVIFDMDGLLLDTEKFYTEVQELILARYNKTF-DWSLKAKMMGKKAIEAAQVFVEETGISDKLSAEDFLVQREETL 86 (237)
Q Consensus 8 ~~~~~vifD~DGTL~~~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (237)
|++|+|+||+||||+|+...+..++..+++++|... ..+.+..+.|.+....+..+ ++. ...+++.+.+...+
T Consensus 2 M~~k~viFDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~-----~~~-~~~~~~~~~~~~~~ 75 (210)
T 2ah5_A 2 TSITAIFFDLDGTLVDSSIGIHNAFTYTFKELGVPSPDAKTIRGFMGPPLESSFATC-----LSK-DQISEAVQIYRSYY 75 (210)
T ss_dssp TTCCEEEECSBTTTEECHHHHHHHHHHHHHHHTCCCCCHHHHHHTSSSCHHHHHHTT-----SCG-GGHHHHHHHHHHHH
T ss_pred CCCCEEEEcCCCcCccCHHHHHHHHHHHHHHcCCCCCCHHHHHHHcCccHHHHHHHH-----cCH-HHHHHHHHHHHHHH
Confidence 468999999999999999999999999999999865 34556666666544333222 221 12344444444444
Q ss_pred Hhh-cCCCCCCccHHHHHHHHHhCCCCEEEEeCChhhHHHHHHhhhhhhhhhcceeeeCCCCCccCCCCCHHHHHHHHHH
Q 026543 87 QTL-FPTSELMPGASHLIRHLHAKGIPMCVATGSLARHFELKTQKHRELFSLMHHVVRGDDPEVKQGKPSPDIFLAAAKR 165 (237)
Q Consensus 87 ~~~-~~~~~~~~~~~~~l~~l~~~g~~v~i~s~~~~~~~~~~~~~~~gl~~~f~~~~~~~~~~~~~~kp~~~~~~~~l~~ 165 (237)
... .....++||+.++++.|++ |++++++||+...... ..++.+|+..+|+.+++++ +..||+|..|..++++
T Consensus 76 ~~~~~~~~~~~~g~~~~l~~L~~-~~~l~i~T~~~~~~~~-~~l~~~gl~~~f~~i~~~~----~~~Kp~p~~~~~~~~~ 149 (210)
T 2ah5_A 76 KAKGIYEAQLFPQIIDLLEELSS-SYPLYITTTKDTSTAQ-DMAKNLEIHHFFDGIYGSS----PEAPHKADVIHQALQT 149 (210)
T ss_dssp HHTGGGSCEECTTHHHHHHHHHT-TSCEEEEEEEEHHHHH-HHHHHTTCGGGCSEEEEEC----SSCCSHHHHHHHHHHH
T ss_pred HHhccCCCCCCCCHHHHHHHHHc-CCeEEEEeCCCHHHHH-HHHHhcCchhheeeeecCC----CCCCCChHHHHHHHHH
Confidence 332 3346789999999999999 9999999997665544 4677889999999998775 5689999999999999
Q ss_pred cCCCCCCCCcEEEEecCHHHHHHHHHcCCeEEEEcCCCCCcc--cccchhhhhhhhcccCC
Q 026543 166 FEGGPIDSQEILVFEDAPSGVLAAKNAGMSVVMVPDPRLDSS--YHSNADQLLSSLLGFNP 224 (237)
Q Consensus 166 ~~~~~~~~~~~~~igD~~~Di~~a~~~G~~~i~v~~~~~~~~--~~~~~~~~~~~~~el~~ 224 (237)
+| ++|++|++|||+.+|+++|+++|+.+++|.++..... ....++++++++.|+..
T Consensus 150 lg---~~p~~~~~vgDs~~Di~~a~~aG~~~i~v~~~~~~~~~l~~~~a~~v~~~~~el~~ 207 (210)
T 2ah5_A 150 HQ---LAPEQAIIIGDTKFDMLGARETGIQKLAITWGFGEQADLLNYQPDYIAHKPLEVLA 207 (210)
T ss_dssp TT---CCGGGEEEEESSHHHHHHHHHHTCEEEEESSSSSCHHHHHTTCCSEEESSTTHHHH
T ss_pred cC---CCcccEEEECCCHHHHHHHHHCCCcEEEEcCCCCCHHHHHhCCCCEEECCHHHHHH
Confidence 99 9999999999999999999999999999998765322 23468899999988743
|
| >4eek_A Beta-phosphoglucomutase-related protein; hydrolase, magnesium binding site, enzyme function initiativ; 1.60A {Deinococcus radiodurans} PDB: 4eel_A* 4een_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-33 Score=217.48 Aligned_cols=213 Identities=21% Similarity=0.283 Sum_probs=177.7
Q ss_pred CCccEEEEecCcccccchhhHHHHHHHHHHHcCCCCCHHH-HHHhcCCChHHHHHHHHHHhCCCCCCCHHHHHHHHHHHH
Q 026543 8 KPITHVIFDMDGLLLDTEKFYTEVQELILARYNKTFDWSL-KAKMMGKKAIEAAQVFVEETGISDKLSAEDFLVQREETL 86 (237)
Q Consensus 8 ~~~~~vifD~DGTL~~~~~~~~~~~~~~~~~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (237)
+++|+|+||+||||+++...+...+..+++++|....... ...+.+.+.....+.+...++.. .....+....+.+.
T Consensus 26 ~~ik~i~fDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~ 103 (259)
T 4eek_A 26 APFDAVLFDLDGVLVESEGIIAQVWQSVLAERGLHLDLTEIAMYFTGQRFDGVLAYLAQQHDFV--PPPDFLDVLETRFN 103 (259)
T ss_dssp CCCSEEEEESBTTTEECHHHHHHHHHHHHHHTTCCCCHHHHHHHTTTCCHHHHHHHHHHHHCCC--CCTTHHHHHHHHHH
T ss_pred cCCCEEEECCCCCcccCHHHHHHHHHHHHHHhCCCCCHHHHHHHHhCCCHHHHHHHHHHHcCCC--CCHHHHHHHHHHHH
Confidence 4689999999999999999999999999999999877654 45667888888888888888876 44444444444433
Q ss_pred HhhcCCCCCCccHHHHHHHHHhCCCCEEEEeCChhhHHHHHHhhhhhhhhhcce-eeeCCCCCcc-CCCCCHHHHHHHHH
Q 026543 87 QTLFPTSELMPGASHLIRHLHAKGIPMCVATGSLARHFELKTQKHRELFSLMHH-VVRGDDPEVK-QGKPSPDIFLAAAK 164 (237)
Q Consensus 87 ~~~~~~~~~~~~~~~~l~~l~~~g~~v~i~s~~~~~~~~~~~~~~~gl~~~f~~-~~~~~~~~~~-~~kp~~~~~~~~l~ 164 (237)
+.. ....++|++.++++.|+++|++++++||+...... ..++..|+..+|+. +++++ ..+ ..||++..+..+++
T Consensus 104 ~~~-~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~-~~l~~~~l~~~f~~~i~~~~--~~~~~~Kp~~~~~~~~~~ 179 (259)
T 4eek_A 104 AAM-TGVTAIEGAAETLRALRAAGVPFAIGSNSERGRLH-LKLRVAGLTELAGEHIYDPS--WVGGRGKPHPDLYTFAAQ 179 (259)
T ss_dssp HHH-TTCEECTTHHHHHHHHHHHTCCEEEECSSCHHHHH-HHHHHTTCHHHHCSCEECGG--GGTTCCTTSSHHHHHHHH
T ss_pred HHh-ccCCcCccHHHHHHHHHHCCCeEEEEeCCCHHHHH-HHHHhcChHhhccceEEeHh--hcCcCCCCChHHHHHHHH
Confidence 333 66889999999999999999999999997665544 56788899999999 99888 888 99999999999999
Q ss_pred HcCCCCCCCCcEEEEecCHHHHHHHHHcCCeEEEEcCCCCC------cccccchhhhhhhhcccCCCCCCC
Q 026543 165 RFEGGPIDSQEILVFEDAPSGVLAAKNAGMSVVMVPDPRLD------SSYHSNADQLLSSLLGFNPKDWGL 229 (237)
Q Consensus 165 ~~~~~~~~~~~~~~igD~~~Di~~a~~~G~~~i~v~~~~~~------~~~~~~~~~~~~~~~el~~~l~~l 229 (237)
++| ++|++|++|||+.+|+++|+.+|+.+++|.++... ......++++++++.||...+...
T Consensus 180 ~lg---i~~~~~i~iGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~~~~~ad~vi~~l~el~~~l~~~ 247 (259)
T 4eek_A 180 QLG---ILPERCVVIEDSVTGGAAGLAAGATLWGLLVPGHPHPDGAAALSRLGAARVLTSHAELRAALAEA 247 (259)
T ss_dssp HTT---CCGGGEEEEESSHHHHHHHHHHTCEEEEECCTTSCCSSCHHHHHHHTCSEEECSHHHHHHHHHHT
T ss_pred HcC---CCHHHEEEEcCCHHHHHHHHHCCCEEEEEccCCCcccccHHHHHhcCcchhhCCHHHHHHHHHhc
Confidence 999 99999999999999999999999999999887543 223456899999999998776543
|
| >3dv9_A Beta-phosphoglucomutase; structural genomics, APC60149, PSI- protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.72A {Bacteroides vulgatus} | Back alignment and structure |
|---|
Probab=100.00 E-value=9.8e-33 Score=210.45 Aligned_cols=211 Identities=26% Similarity=0.382 Sum_probs=172.8
Q ss_pred CCCccEEEEecCcccccchhhHHHHHHHHHHHcCCCCCHHHHHHhcCCChHHHHHHHHH-HhCCCCCCCHHHHHHHHHHH
Q 026543 7 KKPITHVIFDMDGLLLDTEKFYTEVQELILARYNKTFDWSLKAKMMGKKAIEAAQVFVE-ETGISDKLSAEDFLVQREET 85 (237)
Q Consensus 7 ~~~~~~vifD~DGTL~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 85 (237)
|+++|+|+||+||||+++...+...+..+++++|............+.+.......+.. .++.. ...+.+.......
T Consensus 20 ~~~~k~i~fDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~ 97 (247)
T 3dv9_A 20 SIDLKAVLFDMDGVLFDSMPNHAESWHKIMKRFGFGLSREEAYMHEGRTGASTINIVSRRERGHD--ATEEEIKAIYQAK 97 (247)
T ss_dssp CCCCCEEEEESBTTTBCCHHHHHHHHHHHHHHTTCCCCHHHHHHTTTSCHHHHHHHHHHHHHSSC--CCHHHHHHHHHHH
T ss_pred CCCCCEEEECCCCccCcCHHHHHHHHHHHHHHcCCCCCHHHHHHHhCCChHHHHHHHHHHhcCCC--CCHHHHHHHHHHH
Confidence 45689999999999999999999999999999999888877777777777666665554 46766 6666666655544
Q ss_pred HHhhc--CCCCCCccHHHHHHHHHhCCCCEEEEeCChhhHHHHHHhhhhhhhhhc--ceeeeCCCCCccCCCCCHHHHHH
Q 026543 86 LQTLF--PTSELMPGASHLIRHLHAKGIPMCVATGSLARHFELKTQKHRELFSLM--HHVVRGDDPEVKQGKPSPDIFLA 161 (237)
Q Consensus 86 ~~~~~--~~~~~~~~~~~~l~~l~~~g~~v~i~s~~~~~~~~~~~~~~~gl~~~f--~~~~~~~~~~~~~~kp~~~~~~~ 161 (237)
..... ....++||+.++++.|+++|++++++||+....... .++. |+..+| +.+++++ ..+.+||++..+..
T Consensus 98 ~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~-~l~~-~l~~~f~~~~~~~~~--~~~~~kp~~~~~~~ 173 (247)
T 3dv9_A 98 TEEFNKCPKAERMPGALEVLTKIKSEGLTPMVVTGSGQTSLLD-RLNH-NFPGIFQANLMVTAF--DVKYGKPNPEPYLM 173 (247)
T ss_dssp HHHHTTSCCCCBCTTHHHHHHHHHHTTCEEEEECSCC---CHH-HHHH-HSTTTCCGGGEECGG--GCSSCTTSSHHHHH
T ss_pred HHHHHhcccCCCCCCHHHHHHHHHHcCCcEEEEcCCchHHHHH-HHHh-hHHHhcCCCeEEecc--cCCCCCCCCHHHHH
Confidence 33322 347889999999999999999999999977665543 4566 899999 8899998 88899999999999
Q ss_pred HHHHcCCCCCCCCcEEEEecCHHHHHHHHHcCCeEEEEcCCCCCcc--cccchhhhhhhhcccCCCC
Q 026543 162 AAKRFEGGPIDSQEILVFEDAPSGVLAAKNAGMSVVMVPDPRLDSS--YHSNADQLLSSLLGFNPKD 226 (237)
Q Consensus 162 ~l~~~~~~~~~~~~~~~igD~~~Di~~a~~~G~~~i~v~~~~~~~~--~~~~~~~~~~~~~el~~~l 226 (237)
+++++| ++|++|++|||+.+|+++|+.+|+.+++|.++..... ....++++++++.|+...+
T Consensus 174 ~~~~lg---~~~~~~i~vGD~~~Di~~a~~aG~~~i~v~~~~~~~~~l~~~~ad~v~~~~~el~~~l 237 (247)
T 3dv9_A 174 ALKKGG---FKPNEALVIENAPLGVQAGVAAGIFTIAVNTGPLHDNVLLNEGANLLFHSMPDFNKNW 237 (247)
T ss_dssp HHHHHT---CCGGGEEEEECSHHHHHHHHHTTSEEEEECCSSSCHHHHHTTTCSEEESSHHHHHHHH
T ss_pred HHHHcC---CChhheEEEeCCHHHHHHHHHCCCeEEEEcCCCCCHHHHHhcCCCEEECCHHHHHHHH
Confidence 999999 9999999999999999999999999999998766432 2357999999999986544
|
| >2hi0_A Putative phosphoglycolate phosphatase; YP_619066.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.51A {Lactobacillus delbrueckii} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.8e-33 Score=210.33 Aligned_cols=209 Identities=15% Similarity=0.171 Sum_probs=163.7
Q ss_pred CccEEEEecCcccccchhhHHHHHHHHHHHcCCC--CCHHHHHHhcCCChHHHHHHHHHHhC-----------C-----C
Q 026543 9 PITHVIFDMDGLLLDTEKFYTEVQELILARYNKT--FDWSLKAKMMGKKAIEAAQVFVEETG-----------I-----S 70 (237)
Q Consensus 9 ~~~~vifD~DGTL~~~~~~~~~~~~~~~~~~g~~--~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~-----~ 70 (237)
++|+|+||+||||+|+...+..++.++++++|.. .+.+.+....+.+.....+.+....+ . .
T Consensus 3 ~~k~viFDlDGTL~ds~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (240)
T 2hi0_A 3 KYKAAIFDMDGTILDTSADLTSALNYAFEQTGHRHDFTVEDIKNFFGSGVVVAVTRALAYEAGSSRESLVAFGTKDEQIP 82 (240)
T ss_dssp SCSEEEECSBTTTEECHHHHHHHHHHHHHHTTSCCCCCHHHHHHHCSSCHHHHHHHHHHHHTTCCHHHHTTTTSTTCCCC
T ss_pred cccEEEEecCCCCccCHHHHHHHHHHHHHHcCCCCCCCHHHHHHhcCccHHHHHHHHHHhcccccccccccccccccccC
Confidence 4799999999999999999999999999999986 56677777788776666655542110 0 0
Q ss_pred CCCCHHHHH---HHHHHHHHhh-cCCCCCCccHHHHHHHHHhCCCCEEEEeCChhhHHHHHHhhhhhhhhhcceeeeCCC
Q 026543 71 DKLSAEDFL---VQREETLQTL-FPTSELMPGASHLIRHLHAKGIPMCVATGSLARHFELKTQKHRELFSLMHHVVRGDD 146 (237)
Q Consensus 71 ~~~~~~~~~---~~~~~~~~~~-~~~~~~~~~~~~~l~~l~~~g~~v~i~s~~~~~~~~~~~~~~~gl~~~f~~~~~~~~ 146 (237)
.....+... +.+...+... .....++||+.++++.|+++|++++++||+...... ..++.+|+. +|+.+++++
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~~l~~~g~~~~i~t~~~~~~~~-~~l~~~~l~-~f~~~~~~~- 159 (240)
T 2hi0_A 83 EAVTQTEVNRVLEVFKPYYADHCQIKTGPFPGILDLMKNLRQKGVKLAVVSNKPNEAVQ-VLVEELFPG-SFDFALGEK- 159 (240)
T ss_dssp TTCCHHHHHHHHHHHHHHHHHTSSSSCEECTTHHHHHHHHHHTTCEEEEEEEEEHHHHH-HHHHHHSTT-TCSEEEEEC-
T ss_pred CCCCHHHHHHHHHHHHHHHHHhhhhcCCcCCCHHHHHHHHHHCCCEEEEEeCCCHHHHH-HHHHHcCCc-ceeEEEecC-
Confidence 002333332 3333333332 345778999999999999999999999997665444 567778888 999999998
Q ss_pred CCccCCCCCHHHHHHHHHHcCCCCCCCCcEEEEecCHHHHHHHHHcCCeEEEEcCCCCC-c-ccccchhhhhhhhcccCC
Q 026543 147 PEVKQGKPSPDIFLAAAKRFEGGPIDSQEILVFEDAPSGVLAAKNAGMSVVMVPDPRLD-S-SYHSNADQLLSSLLGFNP 224 (237)
Q Consensus 147 ~~~~~~kp~~~~~~~~l~~~~~~~~~~~~~~~igD~~~Di~~a~~~G~~~i~v~~~~~~-~-~~~~~~~~~~~~~~el~~ 224 (237)
....+||+|..|..+++++| ++|++|++|||+.+|+++|+++|+.+++|.++... + .....++++++++.|+..
T Consensus 160 -~~~~~Kp~p~~~~~~~~~l~---~~~~~~~~vGDs~~Di~~a~~aG~~~v~v~~~~~~~~~~~~~~a~~~~~~~~el~~ 235 (240)
T 2hi0_A 160 -SGIRRKPAPDMTSECVKVLG---VPRDKCVYIGDSEIDIQTARNSEMDEIAVNWGFRSVPFLQKHGATVIVDTAEKLEE 235 (240)
T ss_dssp -TTSCCTTSSHHHHHHHHHHT---CCGGGEEEEESSHHHHHHHHHTTCEEEEESSSSSCHHHHHHTTCCCEECSHHHHHH
T ss_pred -CCCCCCCCHHHHHHHHHHcC---CCHHHeEEEcCCHHHHHHHHHCCCeEEEECCCCCchhHHHhcCCCEEECCHHHHHH
Confidence 78889999999999999999 99999999999999999999999999999987653 2 223468889999988754
|
| >3mc1_A Predicted phosphatase, HAD family; PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.93A {Clostridium acetobutylicum} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=6.4e-34 Score=214.32 Aligned_cols=210 Identities=18% Similarity=0.178 Sum_probs=168.2
Q ss_pred CCCccEEEEecCcccccchhhHHHHHHHHHHHcCCCC-CHHHHHHhcCCChHHHHHHHHHHhCCCCCCCHHHHHHHHHHH
Q 026543 7 KKPITHVIFDMDGLLLDTEKFYTEVQELILARYNKTF-DWSLKAKMMGKKAIEAAQVFVEETGISDKLSAEDFLVQREET 85 (237)
Q Consensus 7 ~~~~~~vifD~DGTL~~~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (237)
|+++|+|+||+||||+++...+...+..+++++|... ..+.+....|.+....+.... +++ .+........+
T Consensus 1 M~m~k~i~fDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~---~~~----~~~~~~~~~~~ 73 (226)
T 3mc1_A 1 MSLYNYVLFDLDGTLTDSAEGITKSVKYSLNKFDIQVEDLSSLNKFVGPPLKTSFMEYY---NFD----EETATVAIDYY 73 (226)
T ss_dssp -CCCCEEEECSBTTTBCCHHHHHHHHHHHHHTTTCCCSCGGGGGGGSSSCHHHHHHHHH---CCC----HHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCccccCHHHHHHHHHHHHHHcCCCCCCHHHHHHHhCcCHHHHHHHHh---CCC----HHHHHHHHHHH
Confidence 3458999999999999999999999999999999864 345556667776665544333 433 44443333332
Q ss_pred HHh----hcCCCCCCccHHHHHHHHHhCCCCEEEEeCChhhHHHHHHhhhhhhhhhcceeeeCCCCCccCCCCCHHHHHH
Q 026543 86 LQT----LFPTSELMPGASHLIRHLHAKGIPMCVATGSLARHFELKTQKHRELFSLMHHVVRGDDPEVKQGKPSPDIFLA 161 (237)
Q Consensus 86 ~~~----~~~~~~~~~~~~~~l~~l~~~g~~v~i~s~~~~~~~~~~~~~~~gl~~~f~~~~~~~~~~~~~~kp~~~~~~~ 161 (237)
... ......++||+.++++.|+++|++++++||+...... ..++..|+..+|+.+++++ ..+.+||++..+..
T Consensus 74 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~-~~l~~~~l~~~f~~~~~~~--~~~~~kp~~~~~~~ 150 (226)
T 3mc1_A 74 RDYFKAKGMFENKVYDGIEALLSSLKDYGFHLVVATSKPTVFSK-QILEHFKLAFYFDAIVGSS--LDGKLSTKEDVIRY 150 (226)
T ss_dssp HHHHTTTGGGSCCBCTTHHHHHHHHHHHTCEEEEEEEEEHHHHH-HHHHHTTCGGGCSEEEEEC--TTSSSCSHHHHHHH
T ss_pred HHHHHHhCcccCccCcCHHHHHHHHHHCCCeEEEEeCCCHHHHH-HHHHHhCCHhheeeeeccC--CCCCCCCCHHHHHH
Confidence 222 2234689999999999999999999999997665444 5678889999999999999 88899999999999
Q ss_pred HHHHcCCCCCCCCcEEEEecCHHHHHHHHHcCCeEEEEcCCCCCccc--ccchhhhhhhhcccCCCCCCC
Q 026543 162 AAKRFEGGPIDSQEILVFEDAPSGVLAAKNAGMSVVMVPDPRLDSSY--HSNADQLLSSLLGFNPKDWGL 229 (237)
Q Consensus 162 ~l~~~~~~~~~~~~~~~igD~~~Di~~a~~~G~~~i~v~~~~~~~~~--~~~~~~~~~~~~el~~~l~~l 229 (237)
+++++| ++|++|++|||+.+|+++|+.+|+.+++|.+++..... +..++++++++.|+...+.+.
T Consensus 151 ~~~~lg---i~~~~~i~iGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~ad~v~~s~~el~~~~~~~ 217 (226)
T 3mc1_A 151 AMESLN---IKSDDAIMIGDREYDVIGALKNNLPSIGVTYGFGSYEELKNAGANYIVNSVDELHKKILEL 217 (226)
T ss_dssp HHHHHT---CCGGGEEEEESSHHHHHHHHTTTCCEEEESSSSSCHHHHHHHTCSEEESSHHHHHHHHHTC
T ss_pred HHHHhC---cCcccEEEECCCHHHHHHHHHCCCCEEEEccCCCCHHHHHHcCCCEEECCHHHHHHHHHHH
Confidence 999999 99999999999999999999999999999988764332 478999999999997766544
|
| >3nas_A Beta-PGM, beta-phosphoglucomutase; PSI, structural genomics, protein structure initiative, NEW research center for structural genomics; 3.00A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.9e-33 Score=209.67 Aligned_cols=203 Identities=25% Similarity=0.397 Sum_probs=157.8
Q ss_pred CccEEEEecCcccccchhhHHHHHHHHHHHcCCCCCHHHHHHhcCCChHHHHHHHHHHhCCCCCCCHHHHHHH---HHHH
Q 026543 9 PITHVIFDMDGLLLDTEKFYTEVQELILARYNKTFDWSLKAKMMGKKAIEAAQVFVEETGISDKLSAEDFLVQ---REET 85 (237)
Q Consensus 9 ~~~~vifD~DGTL~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~ 85 (237)
++|+|+||+||||+++...+...+..+++++|.....+....+.+.+.....+.+...++.......+..... +...
T Consensus 1 ~ik~i~fDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (233)
T 3nas_A 1 SLKAVIFDLDGVITDTAEYHFLAWKHIAEQIDIPFDRDMNERLKGISREESLESILIFGGAETKYTNAEKQELMHRKNRD 80 (233)
T ss_dssp -CCEEEECSBTTTBCHHHHHHHHHHHHHHHTTCCCCHHHHHHTTTCCHHHHHHHHHHHTTCTTTSCHHHHHHHHHHHHHH
T ss_pred CCcEEEECCCCCcCCCHHHHHHHHHHHHHHcCCCCCHHHHHHHcCCCHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHH
Confidence 3689999999999999999999999999999999888888888899998888999888876211555554433 2333
Q ss_pred HHhhcCC---CCCCccHHHHHHHHHhCCCCEEEEeCChhhHHHHHHhhhhhhhhhcceeeeCCCCCccCCCCCHHHHHHH
Q 026543 86 LQTLFPT---SELMPGASHLIRHLHAKGIPMCVATGSLARHFELKTQKHRELFSLMHHVVRGDDPEVKQGKPSPDIFLAA 162 (237)
Q Consensus 86 ~~~~~~~---~~~~~~~~~~l~~l~~~g~~v~i~s~~~~~~~~~~~~~~~gl~~~f~~~~~~~~~~~~~~kp~~~~~~~~ 162 (237)
+...... ..++||+.++++.|+++|++++++||+.. ....++..|+..+|+.+++++ ..+.+||++..|..+
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~---~~~~l~~~gl~~~f~~i~~~~--~~~~~Kp~~~~~~~~ 155 (233)
T 3nas_A 81 YQMLISKLTPEDLLPGIGRLLCQLKNENIKIGLASSSRN---APKILRRLAIIDDFHAIVDPT--TLAKGKPDPDIFLTA 155 (233)
T ss_dssp HHHHHHTCCGGGSCTTHHHHHHHHHHTTCEEEECCSCTT---HHHHHHHTTCTTTCSEECCC-----------CCHHHHH
T ss_pred HHHHHhhcCcCCcCcCHHHHHHHHHHCCCcEEEEcCchh---HHHHHHHcCcHhhcCEEeeHh--hCCCCCCChHHHHHH
Confidence 3333222 34799999999999999999999999644 335678889999999999998 888999999999999
Q ss_pred HHHcCCCCCCCCcEEEEecCHHHHHHHHHcCCeEEEEcCCCCCcccccchhhhhhhhcccC
Q 026543 163 AKRFEGGPIDSQEILVFEDAPSGVLAAKNAGMSVVMVPDPRLDSSYHSNADQLLSSLLGFN 223 (237)
Q Consensus 163 l~~~~~~~~~~~~~~~igD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~~~~el~ 223 (237)
++++| ++|++|++|||+.+|+++|+.+|+.++++..... .. .++++++++.|+.
T Consensus 156 ~~~lg---i~~~~~i~vGDs~~Di~~a~~aG~~~~~~~~~~~---~~-~ad~v~~s~~el~ 209 (233)
T 3nas_A 156 AAMLD---VSPADCAAIEDAEAGISAIKSAGMFAVGVGQGQP---ML-GADLVVRQTSDLT 209 (233)
T ss_dssp HHHHT---SCGGGEEEEECSHHHHHHHHHTTCEEEECC-----------CSEECSSGGGCC
T ss_pred HHHcC---CCHHHEEEEeCCHHHHHHHHHcCCEEEEECCccc---cc-cCCEEeCChHhCC
Confidence 99999 9999999999999999999999999999965422 23 8999999999985
|
| >2nyv_A Pgpase, PGP, phosphoglycolate phosphatase; structural genomics, PSI-2, protein structure initiative; 2.10A {Aquifex aeolicus} PDB: 2yy6_A | Back alignment and structure |
|---|
Probab=100.00 E-value=5.4e-33 Score=209.11 Aligned_cols=205 Identities=18% Similarity=0.204 Sum_probs=165.0
Q ss_pred CccEEEEecCcccccchhhHHHHHHHHHHHcCCC-CCHHHHHHhcCCChHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHH
Q 026543 9 PITHVIFDMDGLLLDTEKFYTEVQELILARYNKT-FDWSLKAKMMGKKAIEAAQVFVEETGISDKLSAEDFLVQREETLQ 87 (237)
Q Consensus 9 ~~~~vifD~DGTL~~~~~~~~~~~~~~~~~~g~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (237)
++|+|+||+||||+++...+..++..+++++|.. .+.+.+....+.+....++.+... ...+++...+...+.
T Consensus 2 ~~k~viFDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~~~------~~~~~~~~~~~~~~~ 75 (222)
T 2nyv_A 2 SLRVILFDLDGTLIDSAKDIALALEKTLKELGLEEYYPDNVTKYIGGGVRALLEKVLKD------KFREEYVEVFRKHYL 75 (222)
T ss_dssp EECEEEECTBTTTEECHHHHHHHHHHHHHHTTCGGGCCSCGGGGCSSCHHHHHHHHHGG------GCCTHHHHHHHHHHH
T ss_pred CCCEEEECCCCcCCCCHHHHHHHHHHHHHHcCCCCCCHHHHHHHhCcCHHHHHHHHhCh------HHHHHHHHHHHHHHH
Confidence 4799999999999999999999999999999885 344445566677766666555431 222334444444444
Q ss_pred hh-cCCCCCCccHHHHHHHHHhCCCCEEEEeCChhhHHHHHHhhhhhhhhhcceeeeCCCCCccCCCCCHHHHHHHHHHc
Q 026543 88 TL-FPTSELMPGASHLIRHLHAKGIPMCVATGSLARHFELKTQKHRELFSLMHHVVRGDDPEVKQGKPSPDIFLAAAKRF 166 (237)
Q Consensus 88 ~~-~~~~~~~~~~~~~l~~l~~~g~~v~i~s~~~~~~~~~~~~~~~gl~~~f~~~~~~~~~~~~~~kp~~~~~~~~l~~~ 166 (237)
.. .....++||+.++++.|+++|++++++||+...... ..++.+|+..+|+.+++++ +.+..||++..+..+++++
T Consensus 76 ~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~-~~l~~~gl~~~f~~i~~~~--~~~~~Kp~~~~~~~~~~~~ 152 (222)
T 2nyv_A 76 ENPVVYTKPYPEIPYTLEALKSKGFKLAVVSNKLEELSK-KILDILNLSGYFDLIVGGD--TFGEKKPSPTPVLKTLEIL 152 (222)
T ss_dssp HCSCSSCEECTTHHHHHHHHHHTTCEEEEECSSCHHHHH-HHHHHTTCGGGCSEEECTT--SSCTTCCTTHHHHHHHHHH
T ss_pred HhccccCccCCCHHHHHHHHHHCCCeEEEEcCCCHHHHH-HHHHHcCCHHHheEEEecC--cCCCCCCChHHHHHHHHHh
Confidence 33 356789999999999999999999999997665444 5678889999999999998 7888999999999999999
Q ss_pred CCCCCCCCcEEEEecCHHHHHHHHHcCCeEEEEcCCCCCcccccchhhhhhhhcccCCCC
Q 026543 167 EGGPIDSQEILVFEDAPSGVLAAKNAGMSVVMVPDPRLDSSYHSNADQLLSSLLGFNPKD 226 (237)
Q Consensus 167 ~~~~~~~~~~~~igD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~~~~el~~~l 226 (237)
| ++|++|++|||+.+|+++|+.+|+.+++|.++...... ..++++++++.|+...+
T Consensus 153 ~---~~~~~~~~vGD~~~Di~~a~~aG~~~i~v~~g~~~~~~-~~~~~~~~~~~el~~~l 208 (222)
T 2nyv_A 153 G---EEPEKALIVGDTDADIEAGKRAGTKTALALWGYVKLNS-QIPDFTLSRPSDLVKLM 208 (222)
T ss_dssp T---CCGGGEEEEESSHHHHHHHHHHTCEEEEETTSSCSCCC-CCCSEEESSTTHHHHHH
T ss_pred C---CCchhEEEECCCHHHHHHHHHCCCeEEEEcCCCCCccc-cCCCEEECCHHHHHHHH
Confidence 9 99999999999999999999999999999987654333 67889999999886554
|
| >2hsz_A Novel predicted phosphatase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: UNL; 1.90A {Haemophilus somnus 129PT} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=100.00 E-value=7.1e-32 Score=205.72 Aligned_cols=211 Identities=20% Similarity=0.215 Sum_probs=166.5
Q ss_pred CCCccEEEEecCcccccchhhHHHHHHHHHHHcCCCC-CHHHHHHhcCCChHHHHHHHHHHh----CCCCCCCHHHHHHH
Q 026543 7 KKPITHVIFDMDGLLLDTEKFYTEVQELILARYNKTF-DWSLKAKMMGKKAIEAAQVFVEET----GISDKLSAEDFLVQ 81 (237)
Q Consensus 7 ~~~~~~vifD~DGTL~~~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~ 81 (237)
+.++|+|+||+||||+++...+..++.++++++|... ..+.+..+.+.+....++...... +.. ...+.+...
T Consensus 20 ~~~~k~iiFDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~ 97 (243)
T 2hsz_A 20 MTQFKLIGFDLDGTLVNSLPDLALSINSALKDVNLPQASENLVMTWIGNGADVLSQRAVDWACKQAEKE--LTEDEFKYF 97 (243)
T ss_dssp CSSCSEEEECSBTTTEECHHHHHHHHHHHHHHTTCCCCCHHHHHHHCSSCHHHHHHHHHHHHHHHHTCC--CCHHHHHHH
T ss_pred CccCCEEEEcCCCcCCCCHHHHHHHHHHHHHHcCCCCCCHHHHHHHhCchHHHHHHHHhhhhhcccccc--CCHHHHHHH
Confidence 4678999999999999999999999999999999863 455566677766665555544331 322 333333322
Q ss_pred ---HHHHHHh-hcCCCCCCccHHHHHHHHHhCCCCEEEEeCChhhHHHHHHhhhhhhhhhcceeeeCCCCCccCCCCCHH
Q 026543 82 ---REETLQT-LFPTSELMPGASHLIRHLHAKGIPMCVATGSLARHFELKTQKHRELFSLMHHVVRGDDPEVKQGKPSPD 157 (237)
Q Consensus 82 ---~~~~~~~-~~~~~~~~~~~~~~l~~l~~~g~~v~i~s~~~~~~~~~~~~~~~gl~~~f~~~~~~~~~~~~~~kp~~~ 157 (237)
+...+.. ......++||+.++|+.|+++|++++++||+...... ..++.+|+..+|+.+++++ ..+..||++.
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~-~~l~~~gl~~~f~~~~~~~--~~~~~Kp~~~ 174 (243)
T 2hsz_A 98 KRQFGFYYGENLCNISRLYPNVKETLEALKAQGYILAVVTNKPTKHVQ-PILTAFGIDHLFSEMLGGQ--SLPEIKPHPA 174 (243)
T ss_dssp HHHHHHHHHHHTTSSCEECTTHHHHHHHHHHTTCEEEEECSSCHHHHH-HHHHHTTCGGGCSEEECTT--TSSSCTTSSH
T ss_pred HHHHHHHHHHhccccCccCCCHHHHHHHHHHCCCEEEEEECCcHHHHH-HHHHHcCchheEEEEEecc--cCCCCCcCHH
Confidence 2222222 2345788999999999999999999999997665444 5678889999999999998 7888999999
Q ss_pred HHHHHHHHcCCCCCCCCcEEEEecCHHHHHHHHHcCCeEEEEcCCCC--CcccccchhhhhhhhcccCCC
Q 026543 158 IFLAAAKRFEGGPIDSQEILVFEDAPSGVLAAKNAGMSVVMVPDPRL--DSSYHSNADQLLSSLLGFNPK 225 (237)
Q Consensus 158 ~~~~~l~~~~~~~~~~~~~~~igD~~~Di~~a~~~G~~~i~v~~~~~--~~~~~~~~~~~~~~~~el~~~ 225 (237)
.+..+++++| ++|++|++|||+.+|+++|+.+|+.+++|.++.. .......++++++++.|+...
T Consensus 175 ~~~~~~~~~~---~~~~~~~~vGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~ad~vi~~~~el~~~ 241 (243)
T 2hsz_A 175 PFYYLCGKFG---LYPKQILFVGDSQNDIFAAHSAGCAVVGLTYGYNYNIPIAQSKPDWIFDDFADILKI 241 (243)
T ss_dssp HHHHHHHHHT---CCGGGEEEEESSHHHHHHHHHHTCEEEEESSSCSTTCCGGGGCCSEEESSGGGGGGG
T ss_pred HHHHHHHHhC---cChhhEEEEcCCHHHHHHHHHCCCeEEEEcCCCCchhhhhhCCCCEEECCHHHHHHH
Confidence 9999999999 9999999999999999999999999999998754 233456789999999998654
|
| >2hdo_A Phosphoglycolate phosphatase; NP_784602.1, structur genomics, PSI-2, protein structure initiative, joint center structural genomics; HET: MSE; 1.50A {Lactobacillus plantarum} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-32 Score=202.95 Aligned_cols=201 Identities=21% Similarity=0.303 Sum_probs=162.7
Q ss_pred CccEEEEecCcccccchhhHHHHHHHHHHHcCCCCCHHHHHHhcCCChHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHh
Q 026543 9 PITHVIFDMDGLLLDTEKFYTEVQELILARYNKTFDWSLKAKMMGKKAIEAAQVFVEETGISDKLSAEDFLVQREETLQT 88 (237)
Q Consensus 9 ~~~~vifD~DGTL~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (237)
++|+|+||+||||+++...+...+.++++++|.....+......|.+.....+ .++.. ...+.......+..
T Consensus 3 ~~k~iifDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~----~~~~~----~~~~~~~~~~~~~~ 74 (209)
T 2hdo_A 3 TYQALMFDIDGTLTNSQPAYTTVMREVLATYGKPFSPAQAQKTFPMAAEQAMT----ELGIA----ASEFDHFQAQYEDV 74 (209)
T ss_dssp CCSEEEECSBTTTEECHHHHHHHHHHHHHTTTCCCCHHHHHHHTTSCHHHHHH----HTTCC----GGGHHHHHHHHHHH
T ss_pred cccEEEEcCCCCCcCCHHHHHHHHHHHHHHhCCCCCHHHHHHHcCCcHHHHHH----HcCCC----HHHHHHHHHHHHHH
Confidence 57999999999999999999999999999999887777777777776555443 34543 12233333333333
Q ss_pred h---cCCCCCCccHHHHHHHHHhCCCCEEEEeCChhhHHHHHHhhhhhhhhhcceeeeCCCCCccCCCCCHHHHHHHHHH
Q 026543 89 L---FPTSELMPGASHLIRHLHAKGIPMCVATGSLARHFELKTQKHRELFSLMHHVVRGDDPEVKQGKPSPDIFLAAAKR 165 (237)
Q Consensus 89 ~---~~~~~~~~~~~~~l~~l~~~g~~v~i~s~~~~~~~~~~~~~~~gl~~~f~~~~~~~~~~~~~~kp~~~~~~~~l~~ 165 (237)
. .....++|++.++++.|+++ ++++++||+...... ..++.+|+..+|+.+++++ +.+..||++..+..++++
T Consensus 75 ~~~~~~~~~~~~~~~~~l~~l~~~-~~~~i~s~~~~~~~~-~~l~~~~l~~~f~~~~~~~--~~~~~KP~~~~~~~~~~~ 150 (209)
T 2hdo_A 75 MASHYDQIELYPGITSLFEQLPSE-LRLGIVTSQRRNELE-SGMRSYPFMMRMAVTISAD--DTPKRKPDPLPLLTALEK 150 (209)
T ss_dssp HTTCGGGCEECTTHHHHHHHSCTT-SEEEEECSSCHHHHH-HHHTTSGGGGGEEEEECGG--GSSCCTTSSHHHHHHHHH
T ss_pred HhhhcccCCcCCCHHHHHHHHHhc-CcEEEEeCCCHHHHH-HHHHHcChHhhccEEEecC--cCCCCCCCcHHHHHHHHH
Confidence 2 24577899999999999999 999999997665444 5678889999999999998 788899999999999999
Q ss_pred cCCCCCCCCcEEEEecCHHHHHHHHHcCCeEEEEcCCCC-CcccccchhhhhhhhcccCCC
Q 026543 166 FEGGPIDSQEILVFEDAPSGVLAAKNAGMSVVMVPDPRL-DSSYHSNADQLLSSLLGFNPK 225 (237)
Q Consensus 166 ~~~~~~~~~~~~~igD~~~Di~~a~~~G~~~i~v~~~~~-~~~~~~~~~~~~~~~~el~~~ 225 (237)
+| ++|++|++|||+.+|+++|+.+|+.++++.++.. .+.... ++++++++.|+...
T Consensus 151 ~~---~~~~~~i~vGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~-a~~~~~~~~el~~~ 207 (209)
T 2hdo_A 151 VN---VAPQNALFIGDSVSDEQTAQAANVDFGLAVWGMDPNADHQK-VAHRFQKPLDILEL 207 (209)
T ss_dssp TT---CCGGGEEEEESSHHHHHHHHHHTCEEEEEGGGCCTTGGGSC-CSEEESSGGGGGGG
T ss_pred cC---CCcccEEEECCChhhHHHHHHcCCeEEEEcCCCCChhhhcc-CCEEeCCHHHHHHh
Confidence 99 9999999999999999999999999999987665 233334 99999999998654
|
| >3iru_A Phoshonoacetaldehyde hydrolase like protein; phosphonoacetaldehyde hydrolase like P structural genomics, PSI-2, protein structure initiative; 2.30A {Oleispira antarctica} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=5.3e-32 Score=209.73 Aligned_cols=212 Identities=18% Similarity=0.216 Sum_probs=168.4
Q ss_pred CCCccEEEEecCcccccchhhH-HHHHHHHHHHcCCCCCHHHHHHhcCCChHHHHH----------HHHHHhCCCCCCCH
Q 026543 7 KKPITHVIFDMDGLLLDTEKFY-TEVQELILARYNKTFDWSLKAKMMGKKAIEAAQ----------VFVEETGISDKLSA 75 (237)
Q Consensus 7 ~~~~~~vifD~DGTL~~~~~~~-~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~ 75 (237)
|+++|+|+||+||||+++...+ ...+..+++++|+....+......+........ .+...++.. ...
T Consensus 11 ~~~~k~i~fDlDGTL~d~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~ 88 (277)
T 3iru_A 11 AGPVEALILDWAGTTIDFGSLAPVYAFMELFKQEGIEVTQAEAREPMGTEKSEHIRRMLGNSRIANAWLSIKGQA--SNE 88 (277)
T ss_dssp CCCCCEEEEESBTTTBSTTCCHHHHHHHHHHHTTTCCCCHHHHHTTTTSCHHHHHHHHTTSHHHHHHHHHHHSSC--CCH
T ss_pred hccCcEEEEcCCCCcccCCcccHHHHHHHHHHHhCCCCCHHHHHHHhcCchHHHHHHhccchHHHHHHHHHhccC--CCH
Confidence 3458999999999999988766 788999999999988888777777765544333 334455555 555
Q ss_pred HHHHHHHHHHH----HhhcCCCCCCccHHHHHHHHHhCCCCEEEEeCChhhHHHHHHhhhhhhhhh-cceeeeCCCCCcc
Q 026543 76 EDFLVQREETL----QTLFPTSELMPGASHLIRHLHAKGIPMCVATGSLARHFELKTQKHRELFSL-MHHVVRGDDPEVK 150 (237)
Q Consensus 76 ~~~~~~~~~~~----~~~~~~~~~~~~~~~~l~~l~~~g~~v~i~s~~~~~~~~~~~~~~~gl~~~-f~~~~~~~~~~~~ 150 (237)
+.+......+. ........++||+.++++.|+++|++++++||+...... ..++.+|+..+ |+.+++++ ...
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~tn~~~~~~~-~~l~~~~~~~~~~~~~~~~~--~~~ 165 (277)
T 3iru_A 89 EDIKRLYDLFAPIQTRIVAQRSQLIPGWKEVFDKLIAQGIKVGGNTGYGPGMMA-PALIAAKEQGYTPASTVFAT--DVV 165 (277)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTCCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHH-HHHHHHHHTTCCCSEEECGG--GSS
T ss_pred HHHHHHHHHHHHHHHHHhhccCccCcCHHHHHHHHHHcCCeEEEEeCCchHHHH-HHHHhcCcccCCCceEecHH--hcC
Confidence 55444333322 222334789999999999999999999999997665544 56777888888 89999998 888
Q ss_pred CCCCCHHHHHHHHHHcCCCCCCC-CcEEEEecCHHHHHHHHHcCCeEEEEcCCCC-------------------------
Q 026543 151 QGKPSPDIFLAAAKRFEGGPIDS-QEILVFEDAPSGVLAAKNAGMSVVMVPDPRL------------------------- 204 (237)
Q Consensus 151 ~~kp~~~~~~~~l~~~~~~~~~~-~~~~~igD~~~Di~~a~~~G~~~i~v~~~~~------------------------- 204 (237)
.+||++..+..+++++| ++| ++|++|||+.+|+++|+.+|+.+++|.++..
T Consensus 166 ~~kp~~~~~~~~~~~lg---i~~~~~~i~vGD~~~Di~~a~~aG~~~v~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (277)
T 3iru_A 166 RGRPFPDMALKVALELE---VGHVNGCIKVDDTLPGIEEGLRAGMWTVGVSCSGNEVGLDREDWQALSSDEQQSYRQHAE 242 (277)
T ss_dssp SCTTSSHHHHHHHHHHT---CSCGGGEEEEESSHHHHHHHHHTTCEEEEECSSSTTTCCCHHHHHHSCHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHcC---CCCCccEEEEcCCHHHHHHHHHCCCeEEEEecCCcccccchhhhhhcchhhhhhhhhhhH
Confidence 99999999999999999 999 9999999999999999999999999999854
Q ss_pred CcccccchhhhhhhhcccCCCC
Q 026543 205 DSSYHSNADQLLSSLLGFNPKD 226 (237)
Q Consensus 205 ~~~~~~~~~~~~~~~~el~~~l 226 (237)
.+.....|+++++++.||...+
T Consensus 243 ~~l~~~~ad~v~~~~~el~~~l 264 (277)
T 3iru_A 243 QRLFNAGAHYVIDSVADLETVI 264 (277)
T ss_dssp HHHHHHTCSEEESSGGGTHHHH
T ss_pred HHHhhCCCCEEecCHHHHHHHH
Confidence 1223456899999999986554
|
| >3sd7_A Putative phosphatase; structural genomics, haloacid dehalogenase-like hydrolase, H center for structural genomics of infectious diseases; HET: PGE; 1.70A {Clostridium difficile} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.4e-33 Score=210.26 Aligned_cols=205 Identities=12% Similarity=0.112 Sum_probs=165.6
Q ss_pred CccEEEEecCcccccchhhHHHHHHHHHHHcCCCCCHHHHHHhcCCChHHHHHHHHHHhCCCCCCCHHHHHHH---HHHH
Q 026543 9 PITHVIFDMDGLLLDTEKFYTEVQELILARYNKTFDWSLKAKMMGKKAIEAAQVFVEETGISDKLSAEDFLVQ---REET 85 (237)
Q Consensus 9 ~~~~vifD~DGTL~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~ 85 (237)
++|+|+||+||||+++...+...+..+++++|.....+.+....+.+....+... ++++ ....... +...
T Consensus 28 mik~iifDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~---~~~~----~~~~~~~~~~~~~~ 100 (240)
T 3sd7_A 28 NYEIVLFDLDGTLTDPKEGITKSIQYSLNSFGIKEDLENLDQFIGPPLHDTFKEY---YKFE----DKKAKEAVEKYREY 100 (240)
T ss_dssp CCSEEEECSBTTTEECHHHHHHHHHHHHHHTTCCCCGGGGGGGSSSCHHHHHHHT---SCCC----HHHHHHHHHHHHHH
T ss_pred hccEEEEecCCcCccCHHHHHHHHHHHHHHcCCCCCHHHHHHHhCccHHHHHHHH---hCCC----HHHHHHHHHHHHHH
Confidence 4799999999999999999999999999999998666666677776655543332 2333 3333332 2222
Q ss_pred HH-hhcCCCCCCccHHHHHHHHHhCCCCEEEEeCChhhHHHHHHhhhhhhhhhcceeeeCCCCCccCCCCCHHHHHHHHH
Q 026543 86 LQ-TLFPTSELMPGASHLIRHLHAKGIPMCVATGSLARHFELKTQKHRELFSLMHHVVRGDDPEVKQGKPSPDIFLAAAK 164 (237)
Q Consensus 86 ~~-~~~~~~~~~~~~~~~l~~l~~~g~~v~i~s~~~~~~~~~~~~~~~gl~~~f~~~~~~~~~~~~~~kp~~~~~~~~l~ 164 (237)
+. .......++|++.++++.|+++|++++++||+...... ..++.+|+..+|+.+++++ ..+..||++..+..+++
T Consensus 101 ~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~-~~l~~~~l~~~f~~~~~~~--~~~~~kp~~~~~~~~~~ 177 (240)
T 3sd7_A 101 FADKGIFENKIYENMKEILEMLYKNGKILLVATSKPTVFAE-TILRYFDIDRYFKYIAGSN--LDGTRVNKNEVIQYVLD 177 (240)
T ss_dssp HHHTGGGCCEECTTHHHHHHHHHHTTCEEEEEEEEEHHHHH-HHHHHTTCGGGCSEEEEEC--TTSCCCCHHHHHHHHHH
T ss_pred HHHhcccccccCccHHHHHHHHHHCCCeEEEEeCCcHHHHH-HHHHHcCcHhhEEEEEecc--ccCCCCCCHHHHHHHHH
Confidence 22 23345789999999999999999999999997665544 5678889999999999999 88899999999999999
Q ss_pred HcCCCCCC-CCcEEEEecCHHHHHHHHHcCCeEEEEcCCCCCccc--ccchhhhhhhhcccCCCC
Q 026543 165 RFEGGPID-SQEILVFEDAPSGVLAAKNAGMSVVMVPDPRLDSSY--HSNADQLLSSLLGFNPKD 226 (237)
Q Consensus 165 ~~~~~~~~-~~~~~~igD~~~Di~~a~~~G~~~i~v~~~~~~~~~--~~~~~~~~~~~~el~~~l 226 (237)
++| ++ |++|++|||+.+|+++|+.+|+.+++|.++...... ...++++++++.|+...+
T Consensus 178 ~~g---~~~~~~~i~vGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~ad~v~~~~~el~~~l 239 (240)
T 3sd7_A 178 LCN---VKDKDKVIMVGDRKYDIIGAKKIGIDSIGVLYGYGSFEEISESEPTYIVENVESIKDIL 239 (240)
T ss_dssp HHT---CCCGGGEEEEESSHHHHHHHHHHTCEEEEESSSSCCHHHHHHHCCSEEESSSTTHHHHH
T ss_pred HcC---CCCCCcEEEECCCHHHHHHHHHCCCCEEEEeCCCCCHHHHhhcCCCEEECCHHHHHHHh
Confidence 999 99 999999999999999999999999999988764332 478999999999986543
|
| >3qnm_A Haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 1.70A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-31 Score=203.61 Aligned_cols=209 Identities=14% Similarity=0.161 Sum_probs=163.4
Q ss_pred CCccEEEEecCcccccchhhHHHHHHHHHHHcCCCC---CHHHHHHhc-------------C-CChHH----HHHHHHHH
Q 026543 8 KPITHVIFDMDGLLLDTEKFYTEVQELILARYNKTF---DWSLKAKMM-------------G-KKAIE----AAQVFVEE 66 (237)
Q Consensus 8 ~~~~~vifD~DGTL~~~~~~~~~~~~~~~~~~g~~~---~~~~~~~~~-------------~-~~~~~----~~~~~~~~ 66 (237)
|++|+|+||+||||+++...+...+..+++++|... +...+.... + .+... .++.++..
T Consensus 3 m~~k~i~fDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (240)
T 3qnm_A 3 LKYKNLFFDLDDTIWAFSRNARDTFEEVYQKYSFDRYFDSFDHYYTLYQRRNTELWLEYGEGKVTKEELNRQRFFYPLQA 82 (240)
T ss_dssp CCCSEEEECCBTTTBCHHHHHHHHHHHHHHHTTGGGTSSSHHHHHHHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHHHHH
T ss_pred CCceEEEEcCCCCCcCchhhHHHHHHHHHHHcCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHH
Confidence 368999999999999999999999999999998865 443332111 1 11111 23445555
Q ss_pred hCCCCCCCHHHHHHHHHHHHHhhcCCCCCCccHHHHHHHHHhCCCCEEEEeCChhhHHHHHHhhhhhhhhhcceeeeCCC
Q 026543 67 TGISDKLSAEDFLVQREETLQTLFPTSELMPGASHLIRHLHAKGIPMCVATGSLARHFELKTQKHRELFSLMHHVVRGDD 146 (237)
Q Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~v~i~s~~~~~~~~~~~~~~~gl~~~f~~~~~~~~ 146 (237)
.+.. ...........+.........++|++.++++.|+ +|++++++||+...... ..++.+|+..+|+.+++++
T Consensus 83 ~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~-~g~~~~i~sn~~~~~~~-~~l~~~~l~~~f~~~~~~~- 156 (240)
T 3qnm_A 83 VGVE---DEALAERFSEDFFAIIPTKSGLMPHAKEVLEYLA-PQYNLYILSNGFRELQS-RKMRSAGVDRYFKKIILSE- 156 (240)
T ss_dssp TTCC---CHHHHHHHHHHHHHHGGGCCCBSTTHHHHHHHHT-TTSEEEEEECSCHHHHH-HHHHHHTCGGGCSEEEEGG-
T ss_pred cCCC---cHHHHHHHHHHHHHHhhhcCCcCccHHHHHHHHH-cCCeEEEEeCCchHHHH-HHHHHcChHhhceeEEEec-
Confidence 5544 2333334444444444456889999999999999 89999999997665544 5677889999999999999
Q ss_pred CCccCCCCCHHHHHHHHHHcCCCCCCCCcEEEEecCH-HHHHHHHHcCCeEEEEcCCCCCcccccchhhhhhhhcccCCC
Q 026543 147 PEVKQGKPSPDIFLAAAKRFEGGPIDSQEILVFEDAP-SGVLAAKNAGMSVVMVPDPRLDSSYHSNADQLLSSLLGFNPK 225 (237)
Q Consensus 147 ~~~~~~kp~~~~~~~~l~~~~~~~~~~~~~~~igD~~-~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~~~~el~~~ 225 (237)
..+..||++..+..+++++| ++|++|++|||+. +|+++|+.+|+.++++..+.. ......|+++++++.|+..+
T Consensus 157 -~~~~~kp~~~~~~~~~~~lg---i~~~~~~~iGD~~~~Di~~a~~aG~~~~~~~~~~~-~~~~~~~d~vi~sl~e~~~~ 231 (240)
T 3qnm_A 157 -DLGVLKPRPEIFHFALSATQ---SELRESLMIGDSWEADITGAHGVGMHQAFYNVTER-TVFPFQPTYHIHSLKELMNL 231 (240)
T ss_dssp -GTTCCTTSHHHHHHHHHHTT---CCGGGEEEEESCTTTTHHHHHHTTCEEEEECCSCC-CCCSSCCSEEESSTHHHHHH
T ss_pred -cCCCCCCCHHHHHHHHHHcC---CCcccEEEECCCchHhHHHHHHcCCeEEEEcCCCC-CCcCCCCceEECCHHHHHHH
Confidence 88899999999999999999 9999999999996 999999999999999998765 34467899999999998765
Q ss_pred CC
Q 026543 226 DW 227 (237)
Q Consensus 226 l~ 227 (237)
..
T Consensus 232 ~~ 233 (240)
T 3qnm_A 232 LE 233 (240)
T ss_dssp TC
T ss_pred Hh
Confidence 43
|
| >3ed5_A YFNB; APC60080, bacillus subtilis subsp. subtilis STR. 168, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.72A {Bacillus subtilis} PDB: 3i76_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-31 Score=201.47 Aligned_cols=212 Identities=15% Similarity=0.165 Sum_probs=168.1
Q ss_pred CCCccEEEEecCcccccchhhHHHHHHHHHHHcCCCCCHHHHHHhcC-------------CChH----HHHHHHHHHhCC
Q 026543 7 KKPITHVIFDMDGLLLDTEKFYTEVQELILARYNKTFDWSLKAKMMG-------------KKAI----EAAQVFVEETGI 69 (237)
Q Consensus 7 ~~~~~~vifD~DGTL~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~-------------~~~~----~~~~~~~~~~~~ 69 (237)
|+++|+|+||+||||+++...+...+.++++++|..........+.+ .+.. ..+..+.+.+++
T Consensus 4 mm~~k~i~fDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (238)
T 3ed5_A 4 MKRYRTLLFDVDDTILDFQAAEALALRLLFEDQNIPLTNDMKAQYKTINQGLWRAFEEGKMTRDEVVNTRFSALLKEYGY 83 (238)
T ss_dssp CCCCCEEEECCBTTTBCHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHHHHHTTC
T ss_pred cccCCEEEEcCcCcCcCCchhHHHHHHHHHHHcCCCcchHHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHcCC
Confidence 56789999999999999999999999999999999876544332211 1111 123445556666
Q ss_pred CCCCCHHHHHHHHHHHHHhhcCCCCCCccHHHHHHHHHhCCCCEEEEeCChhhHHHHHHhhhhhhhhhcceeeeCCCCCc
Q 026543 70 SDKLSAEDFLVQREETLQTLFPTSELMPGASHLIRHLHAKGIPMCVATGSLARHFELKTQKHRELFSLMHHVVRGDDPEV 149 (237)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~v~i~s~~~~~~~~~~~~~~~gl~~~f~~~~~~~~~~~ 149 (237)
. .....+...+.... .....++|++.++++.|+++ ++++++||+...... ..++.+|+..+|+.+++++ ..
T Consensus 84 ~--~~~~~~~~~~~~~~---~~~~~~~~~~~~~l~~l~~~-~~~~i~t~~~~~~~~-~~l~~~~l~~~f~~~~~~~--~~ 154 (238)
T 3ed5_A 84 E--ADGALLEQKYRRFL---EEGHQLIDGAFDLISNLQQQ-FDLYIVTNGVSHTQY-KRLRDSGLFPFFKDIFVSE--DT 154 (238)
T ss_dssp C--CCHHHHHHHHHHHH---TTCCCBCTTHHHHHHHHHTT-SEEEEEECSCHHHHH-HHHHHTTCGGGCSEEEEGG--GT
T ss_pred C--CcHHHHHHHHHHHH---HhcCCCCccHHHHHHHHHhc-CeEEEEeCCCHHHHH-HHHHHcChHhhhheEEEec--cc
Confidence 6 45454444443332 33478999999999999999 999999997765544 4577789999999999998 88
Q ss_pred cCCCCCHHHHHHHHHHcCCCCCCCCcEEEEecCH-HHHHHHHHcCCeEEEEcCCCCCcccccchhhhhhhhcccCCCCCC
Q 026543 150 KQGKPSPDIFLAAAKRFEGGPIDSQEILVFEDAP-SGVLAAKNAGMSVVMVPDPRLDSSYHSNADQLLSSLLGFNPKDWG 228 (237)
Q Consensus 150 ~~~kp~~~~~~~~l~~~~~~~~~~~~~~~igD~~-~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~~~~el~~~l~~ 228 (237)
+..||++..+..+++++|. ++|++|++|||+. +|+++|+.+|+.++++.++.........++++++++.|+...+..
T Consensus 155 ~~~kp~~~~~~~~~~~~g~--~~~~~~i~vGD~~~~Di~~a~~aG~~~i~~~~~~~~~~~~~~ad~v~~~~~el~~~l~~ 232 (238)
T 3ed5_A 155 GFQKPMKEYFNYVFERIPQ--FSAEHTLIIGDSLTADIKGGQLAGLDTCWMNPDMKPNVPEIIPTYEIRKLEELYHILNI 232 (238)
T ss_dssp TSCTTCHHHHHHHHHTSTT--CCGGGEEEEESCTTTTHHHHHHTTCEEEEECTTCCCCTTCCCCSEEESSGGGHHHHHTC
T ss_pred CCCCCChHHHHHHHHHcCC--CChhHeEEECCCcHHHHHHHHHCCCEEEEECCCCCCCcccCCCCeEECCHHHHHHHHHh
Confidence 8999999999999999962 6899999999998 999999999999999998876666677899999999999776654
Q ss_pred C
Q 026543 229 L 229 (237)
Q Consensus 229 l 229 (237)
.
T Consensus 233 ~ 233 (238)
T 3ed5_A 233 E 233 (238)
T ss_dssp C
T ss_pred h
Confidence 3
|
| >1te2_A Putative phosphatase; structural genomics, phosphates, PSI, protein S initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.76A {Escherichia coli} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=99.98 E-value=4.1e-31 Score=198.57 Aligned_cols=210 Identities=22% Similarity=0.351 Sum_probs=167.8
Q ss_pred CccEEEEecCcccccchhhHHHHHHHHHHHcCCCCC-HHHHHHhcCCChHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHH
Q 026543 9 PITHVIFDMDGLLLDTEKFYTEVQELILARYNKTFD-WSLKAKMMGKKAIEAAQVFVEETGISDKLSAEDFLVQREETLQ 87 (237)
Q Consensus 9 ~~~~vifD~DGTL~~~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (237)
++|+|+||+||||+++...+...+..+++++|.... ...+....|.+.......+....++.. .....+...+...+.
T Consensus 8 ~~k~i~fDlDGTL~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 86 (226)
T 1te2_A 8 QILAAIFDMDGLLIDSEPLWDRAELDVMASLGVDISRRNELPDTLGLRIDMVVDLWYARQPWNG-PSRQEVVERVIARAI 86 (226)
T ss_dssp CCCEEEECCBTTTBCCHHHHHHHHHHHHHHTTCCGGGGGGSCCCTTCCHHHHHHHHHHHSCCSS-SCHHHHHHHHHHHHH
T ss_pred CCCEEEECCCCCcCcCHHHHHHHHHHHHHHcCCCCChHHHHHHHhCCCHHHHHHHHHHHcCCCc-cCHHHHHHHHHHHHH
Confidence 489999999999999999888999999999988654 333444567776666677766666542 234444443333322
Q ss_pred h-hcCCCCCCccHHHHHHHHHhCCCCEEEEeCChhhHHHHHHhhhhhhhhhcceeeeCCCCCccCCCCCHHHHHHHHHHc
Q 026543 88 T-LFPTSELMPGASHLIRHLHAKGIPMCVATGSLARHFELKTQKHRELFSLMHHVVRGDDPEVKQGKPSPDIFLAAAKRF 166 (237)
Q Consensus 88 ~-~~~~~~~~~~~~~~l~~l~~~g~~v~i~s~~~~~~~~~~~~~~~gl~~~f~~~~~~~~~~~~~~kp~~~~~~~~l~~~ 166 (237)
+ ......+.+++.++++.++++|++++++||+...... ..++.+++..+|+.+++++ ..+..||++..+..+++++
T Consensus 87 ~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~-~~l~~~~~~~~~~~~~~~~--~~~~~kp~~~~~~~~~~~~ 163 (226)
T 1te2_A 87 SLVEETRPLLPGVREAVALCKEQGLLVGLASASPLHMLE-KVLTMFDLRDSFDALASAE--KLPYSKPHPQVYLDCAAKL 163 (226)
T ss_dssp HHHHHHCCBCTTHHHHHHHHHHTTCEEEEEESSCHHHHH-HHHHHTTCGGGCSEEEECT--TSSCCTTSTHHHHHHHHHH
T ss_pred HHHhccCCcCccHHHHHHHHHHCCCcEEEEeCCcHHHHH-HHHHhcCcHhhCcEEEecc--ccCCCCCChHHHHHHHHHc
Confidence 2 2234678999999999999999999999997665444 5677788999999999988 7888999999999999999
Q ss_pred CCCCCCCCcEEEEecCHHHHHHHHHcCCeEEEEcCCCC-CcccccchhhhhhhhcccCCC
Q 026543 167 EGGPIDSQEILVFEDAPSGVLAAKNAGMSVVMVPDPRL-DSSYHSNADQLLSSLLGFNPK 225 (237)
Q Consensus 167 ~~~~~~~~~~~~igD~~~Di~~a~~~G~~~i~v~~~~~-~~~~~~~~~~~~~~~~el~~~ 225 (237)
| ++++++++|||+.||+++|+.+|+.++++.++.+ .+.....++++++++.|+...
T Consensus 164 ~---i~~~~~i~iGD~~nDi~~a~~aG~~~~~~~~~~~~~~~~~~~a~~v~~~~~el~~~ 220 (226)
T 1te2_A 164 G---VDPLTCVALEDSVNGMIASKAARMRSIVVPAPEAQNDPRFVLANVKLSSLTELTAK 220 (226)
T ss_dssp T---SCGGGEEEEESSHHHHHHHHHTTCEEEECCCTTTTTCGGGGGSSEECSCGGGCCHH
T ss_pred C---CCHHHeEEEeCCHHHHHHHHHcCCEEEEEcCCCCcccccccccCeEECCHHHHhHH
Confidence 9 9999999999999999999999999999998765 334567899999999998654
|
| >3kzx_A HAD-superfamily hydrolase, subfamily IA, variant; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ehrlich chaffeensis; 1.90A {Ehrlichia chaffeensis} | Back alignment and structure |
|---|
Probab=99.98 E-value=3.1e-32 Score=205.91 Aligned_cols=203 Identities=18% Similarity=0.196 Sum_probs=155.8
Q ss_pred cCCCCCccEEEEecCcccccchhhHHHHH-HHHHHHcCCCCCHHHHHHhcCCChHHHHHHHHHHhCCCCCCCHHHHHHHH
Q 026543 4 VSSKKPITHVIFDMDGLLLDTEKFYTEVQ-ELILARYNKTFDWSLKAKMMGKKAIEAAQVFVEETGISDKLSAEDFLVQR 82 (237)
Q Consensus 4 ~~~~~~~~~vifD~DGTL~~~~~~~~~~~-~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (237)
+..|+++|+|+||+||||+++...+...+ .++++++|... .......+.+....+..+. + .........+
T Consensus 19 ~~~m~~~k~i~fDlDGTL~d~~~~~~~~~~~~~~~~~g~~~--~~~~~~~g~~~~~~~~~~~---~----~~~~~~~~~~ 89 (231)
T 3kzx_A 19 PGSMKQPTAVIFDWYNTLIDTSINIDRTTFYQVLDQMGYKN--IDLDSIPNSTIPKYLITLL---G----KRWKEATILY 89 (231)
T ss_dssp --CCCCCSEEEECTBTTTEETTSSCCHHHHHHHHHHTTCCC--CCCTTSCTTTHHHHHHHHH---G----GGHHHHHHHH
T ss_pred CCccCCCCEEEECCCCCCcCCchhHHHHHHHHHHHHcCCCH--HHHHHHhCccHHHHHHHHh---C----chHHHHHHHH
Confidence 45577899999999999999998888888 99999998764 2223344444444433332 2 2234444444
Q ss_pred HHHHH--hhcCCCCCCccHHHHHHHHHhCCCCEEEEeCChhhHHHHHHhhhhhhhhhcceeeeCCCCCccCCCCCHHHHH
Q 026543 83 EETLQ--TLFPTSELMPGASHLIRHLHAKGIPMCVATGSLARHFELKTQKHRELFSLMHHVVRGDDPEVKQGKPSPDIFL 160 (237)
Q Consensus 83 ~~~~~--~~~~~~~~~~~~~~~l~~l~~~g~~v~i~s~~~~~~~~~~~~~~~gl~~~f~~~~~~~~~~~~~~kp~~~~~~ 160 (237)
...+. .......+.|++.++++.|+++|++++++||+...... ..++.+|+..+|+.+++++ +.+..||++..+.
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~-~~l~~~gl~~~f~~i~~~~--~~~~~Kp~~~~~~ 166 (231)
T 3kzx_A 90 ENSLEKSQKSDNFMLNDGAIELLDTLKENNITMAIVSNKNGERLR-SEIHHKNLTHYFDSIIGSG--DTGTIKPSPEPVL 166 (231)
T ss_dssp HHHHHHCCSCCCCEECTTHHHHHHHHHHTTCEEEEEEEEEHHHHH-HHHHHTTCGGGCSEEEEET--SSSCCTTSSHHHH
T ss_pred HHHHhhhcccccceECcCHHHHHHHHHHCCCeEEEEECCCHHHHH-HHHHHCCchhheeeEEccc--ccCCCCCChHHHH
Confidence 44444 33356789999999999999999999999997665544 5678889999999999998 8889999999999
Q ss_pred HHHHHcCCCCCCCC-cEEEEecCHHHHHHHHHcCCeEEEEcCCCCCcccccchhhhhhhhcccCCCC
Q 026543 161 AAAKRFEGGPIDSQ-EILVFEDAPSGVLAAKNAGMSVVMVPDPRLDSSYHSNADQLLSSLLGFNPKD 226 (237)
Q Consensus 161 ~~l~~~~~~~~~~~-~~~~igD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~~~~el~~~l 226 (237)
.+++++| ++|+ ++++|||+.+|+++|+.+|+.++++..+.. ..+++++.++.|+...+
T Consensus 167 ~~~~~lg---i~~~~~~v~vGD~~~Di~~a~~aG~~~v~~~~~~~-----~~~~~~~~~~~el~~~l 225 (231)
T 3kzx_A 167 AALTNIN---IEPSKEVFFIGDSISDIQSAIEAGCLPIKYGSTNI-----IKDILSFKNFYDIRNFI 225 (231)
T ss_dssp HHHHHHT---CCCSTTEEEEESSHHHHHHHHHTTCEEEEECC----------CCEEESSHHHHHHHH
T ss_pred HHHHHcC---CCcccCEEEEcCCHHHHHHHHHCCCeEEEECCCCC-----CCCceeeCCHHHHHHHH
Confidence 9999999 9999 999999999999999999999999965433 45677888888875543
|
| >2om6_A Probable phosphoserine phosphatase; rossmann fold, B-hairpin, four-helix bundle, structural GENO NPPSFA; 2.20A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=99.98 E-value=1.1e-31 Score=202.92 Aligned_cols=207 Identities=14% Similarity=0.149 Sum_probs=160.9
Q ss_pred CccEEEEecCcccccchhhHHHHHHHHHHHcCCCCCHHH---HHHh----------cCCChH---HHHHHHHHHhCCCCC
Q 026543 9 PITHVIFDMDGLLLDTEKFYTEVQELILARYNKTFDWSL---KAKM----------MGKKAI---EAAQVFVEETGISDK 72 (237)
Q Consensus 9 ~~~~vifD~DGTL~~~~~~~~~~~~~~~~~~g~~~~~~~---~~~~----------~~~~~~---~~~~~~~~~~~~~~~ 72 (237)
++|+|+||+||||+++...+...+.++++++|....... +... .|.+.. ...+.+...+++.
T Consensus 3 m~k~i~fDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-- 80 (235)
T 2om6_A 3 EVKLVTFDVWNTLLDLNIMLDEFSHQLAKISGLHIKDVANAVIEVRNEIKKMRAQASEDPRKVLTGSQEALAGKLKVD-- 80 (235)
T ss_dssp CCCEEEECCBTTTBCHHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHTTCCCTTTHHHHHHHHHHHHHTCC--
T ss_pred CceEEEEeCCCCCCCcchhHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHhhhhcCCCcchHHHHHHHHHHHhCCC--
Confidence 479999999999999999888899999999987644332 2111 144444 4555666666654
Q ss_pred CCHHHHHHHHHHHHHhhcCCCCCCccHHHHHHHHHhCCCCEEEEeCCh---hhHHHHHHhhhhhhhhhcceeeeCCCCCc
Q 026543 73 LSAEDFLVQREETLQTLFPTSELMPGASHLIRHLHAKGIPMCVATGSL---ARHFELKTQKHRELFSLMHHVVRGDDPEV 149 (237)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~v~i~s~~~---~~~~~~~~~~~~gl~~~f~~~~~~~~~~~ 149 (237)
..........+.... ....++|++.++++.|+++|++++++||+. ..... ..++..|+..+|+.+++++ +.
T Consensus 81 --~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~~-~~l~~~~l~~~f~~~~~~~--~~ 154 (235)
T 2om6_A 81 --VELVKRATARAILNV-DESLVLEGTKEALQFVKERGLKTAVIGNVMFWPGSYTR-LLLERFGLMEFIDKTFFAD--EV 154 (235)
T ss_dssp --HHHHHHHHHHHHHHC-CGGGBCTTHHHHHHHHHHTTCEEEEEECCCSSCHHHHH-HHHHHTTCGGGCSEEEEHH--HH
T ss_pred --HHHHHHHHHHHHHhc-cccCcCccHHHHHHHHHHCCCEEEEEcCCcccchhHHH-HHHHhCCcHHHhhhheecc--cc
Confidence 233333343333332 333469999999999999999999999976 54443 5677788999999999988 78
Q ss_pred cCCCCCHHHHHHHHHHcCCCCCCCCcEEEEecCH-HHHHHHHHcCCeEEEEcCCCCCcccccchhhhhhhhcccCCCC
Q 026543 150 KQGKPSPDIFLAAAKRFEGGPIDSQEILVFEDAP-SGVLAAKNAGMSVVMVPDPRLDSSYHSNADQLLSSLLGFNPKD 226 (237)
Q Consensus 150 ~~~kp~~~~~~~~l~~~~~~~~~~~~~~~igD~~-~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~~~~el~~~l 226 (237)
+..||++..+..+++++| ++|++|++|||+. ||+++|+.+|+.++++.++.........++++++++.|+...+
T Consensus 155 ~~~kp~~~~~~~~~~~lg---i~~~~~~~iGD~~~nDi~~a~~aG~~~~~~~~~~~~~~~~~~~~~~~~~~~el~~~l 229 (235)
T 2om6_A 155 LSYKPRKEMFEKVLNSFE---VKPEESLHIGDTYAEDYQGARKVGMWAVWINQEGDKVRKLEERGFEIPSIANLKDVI 229 (235)
T ss_dssp TCCTTCHHHHHHHHHHTT---CCGGGEEEEESCTTTTHHHHHHTTSEEEEECTTCCSCEEEETTEEEESSGGGHHHHH
T ss_pred CCCCCCHHHHHHHHHHcC---CCccceEEECCChHHHHHHHHHCCCEEEEECCCCCCcccCCCCcchHhhHHHHHHHH
Confidence 889999999999999999 9999999999999 9999999999999999987544444456888999999986554
|
| >2go7_A Hydrolase, haloacid dehalogenase-like family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.10A {Streptococcus pneumoniae} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=99.97 E-value=5.9e-31 Score=194.91 Aligned_cols=200 Identities=18% Similarity=0.210 Sum_probs=161.8
Q ss_pred CccEEEEecCcccccchhhHHHHHHHHHHHcCCCCCHHHHHHhcC-CChHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHH
Q 026543 9 PITHVIFDMDGLLLDTEKFYTEVQELILARYNKTFDWSLKAKMMG-KKAIEAAQVFVEETGISDKLSAEDFLVQREETLQ 87 (237)
Q Consensus 9 ~~~~vifD~DGTL~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (237)
++|+|+||+||||+++...+...+.++++++|............+ .+.....+.+.....+ . ......+...+.
T Consensus 3 ~~k~i~fDlDGTL~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~----~-~~~~~~~~~~~~ 77 (207)
T 2go7_A 3 QKTAFIWDLDGTLLDSYEAILSGIEETFAQFSIPYDKEKVREFIFKYSVQDLLVRVAEDRNL----D-VEVLNQVRAQSL 77 (207)
T ss_dssp -CCEEEECTBTTTEECHHHHHHHHHHHHHHHTCCCCHHHHHHHHHHSCHHHHHHHHHHHHTC----C-HHHHHHHHHHHH
T ss_pred cccEEEEeCCCcccccHHHHHHHHHHHHHHcCCCCCHHHHHHHHccccHHHHHHHhhchhhc----c-HHHHHHHHHHHH
Confidence 579999999999999999888999999999998877777777777 6666666665433332 1 223333333333
Q ss_pred hhc-CCCCCCccHHHHHHHHHhCCCCEEEEeCChhhHHHHHHhhhhhhhhhcceeeeCCCCCccCCCCCHHHHHHHHHHc
Q 026543 88 TLF-PTSELMPGASHLIRHLHAKGIPMCVATGSLARHFELKTQKHRELFSLMHHVVRGDDPEVKQGKPSPDIFLAAAKRF 166 (237)
Q Consensus 88 ~~~-~~~~~~~~~~~~l~~l~~~g~~v~i~s~~~~~~~~~~~~~~~gl~~~f~~~~~~~~~~~~~~kp~~~~~~~~l~~~ 166 (237)
+.. ....+.|++.++++.++++|++++++||+...... .++..++..+|+.+++++ ..+..||++..+..+++++
T Consensus 78 ~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~--~~~~~~~~~~f~~~~~~~--~~~~~Kp~~~~~~~~~~~~ 153 (207)
T 2go7_A 78 AEKNAQVVLMPGAREVLAWADESGIQQFIYTHKGNNAFT--ILKDLGVESYFTEILTSQ--SGFVRKPSPEAATYLLDKY 153 (207)
T ss_dssp TTCGGGCEECTTHHHHHHHHHHTTCEEEEECSSCTHHHH--HHHHHTCGGGEEEEECGG--GCCCCTTSSHHHHHHHHHH
T ss_pred HhccccceeCcCHHHHHHHHHHCCCeEEEEeCCchHHHH--HHHHcCchhheeeEEecC--cCCCCCCCcHHHHHHHHHh
Confidence 332 45778999999999999999999999997665544 567778999999999988 7788899999999999999
Q ss_pred CCCCCCCCcEEEEecCHHHHHHHHHcCCeEEEEcCCCCCcccccchhhhhhhhcccCCCC
Q 026543 167 EGGPIDSQEILVFEDAPSGVLAAKNAGMSVVMVPDPRLDSSYHSNADQLLSSLLGFNPKD 226 (237)
Q Consensus 167 ~~~~~~~~~~~~igD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~~~~el~~~l 226 (237)
| ++|+++++|||+.||+++|+.+|+.++++.++. . .++++++++.|+...+
T Consensus 154 ~---i~~~~~~~iGD~~nDi~~~~~aG~~~i~~~~~~-~-----~a~~v~~~~~el~~~l 204 (207)
T 2go7_A 154 Q---LNSDNTYYIGDRTLDVEFAQNSGIQSINFLEST-Y-----EGNHRIQALADISRIF 204 (207)
T ss_dssp T---CCGGGEEEEESSHHHHHHHHHHTCEEEESSCCS-C-----TTEEECSSTTHHHHHT
T ss_pred C---CCcccEEEECCCHHHHHHHHHCCCeEEEEecCC-C-----CCCEEeCCHHHHHHHH
Confidence 9 999999999999999999999999999998765 3 6889999999885543
|
| >2wf7_A Beta-PGM, beta-phosphoglucomutase; transition state analogue, haloacid dehalogenase superfamily, isomerase, phosphotransferase; HET: G7P; 1.05A {Lactococcus lactis} PDB: 1o03_A* 1z4n_A* 1z4o_A* 1zol_A 2wf5_A* 2wf6_A* 1o08_A* 2wf8_A* 2wf9_A* 2wfa_A 2whe_A 1lvh_A* 3fm9_A | Back alignment and structure |
|---|
Probab=99.97 E-value=1.2e-30 Score=195.65 Aligned_cols=200 Identities=21% Similarity=0.377 Sum_probs=161.8
Q ss_pred ccEEEEecCcccccchhhHHHHHHHHHHHcCCC-CCHHHHHHhcCCChHHHHHHHHHHhCCCCCCCHHHHHH---HHHHH
Q 026543 10 ITHVIFDMDGLLLDTEKFYTEVQELILARYNKT-FDWSLKAKMMGKKAIEAAQVFVEETGISDKLSAEDFLV---QREET 85 (237)
Q Consensus 10 ~~~vifD~DGTL~~~~~~~~~~~~~~~~~~g~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~ 85 (237)
+|+|+||+||||+++...+...+..+++++|.. ..........|.+.....+.+....+.. .+.+.... .+...
T Consensus 2 ~k~i~fDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~ 79 (221)
T 2wf7_A 2 FKAVLFDLDGVITDTAEYHFRAWKALAEEIGINGVDRQFNEQLKGVSREDSLQKILDLADKK--VSAEEFKELAKRKNDN 79 (221)
T ss_dssp CCEEEECCBTTTBTHHHHHHHHHHHHHHHTTCCCCSHHHHTTTTTCCHHHHHHHHHHHTTCC--CCHHHHHHHHHHHHHH
T ss_pred CcEEEECCCCcccCChHHHHHHHHHHHHHcCCCCCCHHHHHHhCCCCHHHHHHHHHHHhCCC--CChHHHHHHHHHHHHH
Confidence 689999999999999998999999999999987 6666666777888777777787777754 44444333 23333
Q ss_pred HHhhcC---CCCCCccHHHHHHHHHhCCCCEEEEeCChhhHHHHHHhhhhhhhhhcceeeeCCCCCccCCCCCHHHHHHH
Q 026543 86 LQTLFP---TSELMPGASHLIRHLHAKGIPMCVATGSLARHFELKTQKHRELFSLMHHVVRGDDPEVKQGKPSPDIFLAA 162 (237)
Q Consensus 86 ~~~~~~---~~~~~~~~~~~l~~l~~~g~~v~i~s~~~~~~~~~~~~~~~gl~~~f~~~~~~~~~~~~~~kp~~~~~~~~ 162 (237)
+..... ...++|++.++++.++++|++++++||. ... ...++.+++..+|+.+++++ ..+..||++..+..+
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~t~~--~~~-~~~l~~~~l~~~f~~~~~~~--~~~~~Kp~~~~~~~~ 154 (221)
T 2wf7_A 80 YVKMIQDVSPADVYPGILQLLKDLRSNKIKIALASAS--KNG-PFLLERMNLTGYFDAIADPA--EVAASKPAPDIFIAA 154 (221)
T ss_dssp HHHHGGGCCGGGBCTTHHHHHHHHHHTTCEEEECCCC--TTH-HHHHHHTTCGGGCSEECCTT--TSSSCTTSSHHHHHH
T ss_pred HHHHHhhccCCCCCCCHHHHHHHHHHCCCeEEEEcCc--HHH-HHHHHHcChHHHcceEeccc--cCCCCCCChHHHHHH
Confidence 333322 3568899999999999999999999996 223 34567778999999999998 888999999999999
Q ss_pred HHHcCCCCCCCCcEEEEecCHHHHHHHHHcCCeEEEEcCCCCCcccccchhhhhhhhcccC
Q 026543 163 AKRFEGGPIDSQEILVFEDAPSGVLAAKNAGMSVVMVPDPRLDSSYHSNADQLLSSLLGFN 223 (237)
Q Consensus 163 l~~~~~~~~~~~~~~~igD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~~~~el~ 223 (237)
++++| ++|++|++|||+.||++||+.+|+.++++... +..+ .++++++++.|+.
T Consensus 155 ~~~lg---i~~~~~i~iGD~~nDi~~a~~aG~~~~~~~~~---~~~~-~a~~v~~~~~el~ 208 (221)
T 2wf7_A 155 AHAVG---VAPSESIGLEDSQAGIQAIKDSGALPIGVGRP---EDLG-DDIVIVPDTSHYT 208 (221)
T ss_dssp HHHTT---CCGGGEEEEESSHHHHHHHHHHTCEEEEESCH---HHHC-SSSEEESSGGGCC
T ss_pred HHHcC---CChhHeEEEeCCHHHHHHHHHCCCEEEEECCH---HHhc-cccchhcCHHhCC
Confidence 99999 99999999999999999999999999998432 2233 7888999998874
|
| >2fdr_A Conserved hypothetical protein; SAD, structural genomics, agrobacter tumefaciens, HAD-superfamily hydrolase; 2.00A {Agrobacterium tumefaciens str} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=99.97 E-value=2.7e-31 Score=200.20 Aligned_cols=211 Identities=21% Similarity=0.334 Sum_probs=165.3
Q ss_pred CCccEEEEecCcccccchhhHHHHHHHHHHHcCCCCC-HHHHHHhcCCChHHHHHHHHHHhCCCCCCCHHHHHHHHHHHH
Q 026543 8 KPITHVIFDMDGLLLDTEKFYTEVQELILARYNKTFD-WSLKAKMMGKKAIEAAQVFVEETGISDKLSAEDFLVQREETL 86 (237)
Q Consensus 8 ~~~~~vifD~DGTL~~~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (237)
+++|+|+||+||||+++...+...+.++++++|.... .+......+.+..+.++.+...++.. ............+.
T Consensus 2 ~~ik~i~fDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~ 79 (229)
T 2fdr_A 2 SGFDLIIFDCDGVLVDSEIIAAQVESRLLTEAGYPISVEEMGERFAGMTWKNILLQVESEASIP--LSASLLDKSEKLLD 79 (229)
T ss_dssp -CCSEEEECSBTTTBCCHHHHHHHHHHHHHHTTCCCCHHHHHHHHTTCCHHHHHHHHHHHHCCC--CCTHHHHHHHHHHH
T ss_pred CCccEEEEcCCCCcCccHHHHHHHHHHHHHHhCCCCCHHHHHHHHhCCCHHHHHHHHHHHcCCC--CCHHHHHHHHHHHH
Confidence 4589999999999999999888999999999998777 45566677888888888888887765 33333333222222
Q ss_pred HhhcCCCCCCccHHHHHHHHHhCCCCEEEEeCChhhHHHHHHhhhhhhhhhc-ceeeeCCCCCccCC--CCCHHHHHHHH
Q 026543 87 QTLFPTSELMPGASHLIRHLHAKGIPMCVATGSLARHFELKTQKHRELFSLM-HHVVRGDDPEVKQG--KPSPDIFLAAA 163 (237)
Q Consensus 87 ~~~~~~~~~~~~~~~~l~~l~~~g~~v~i~s~~~~~~~~~~~~~~~gl~~~f-~~~~~~~~~~~~~~--kp~~~~~~~~l 163 (237)
+.......+++++.++++.++. +++++||+...... ..++.+++..+| +.+++++ ..+.+ ||++..+..++
T Consensus 80 ~~~~~~~~~~~~~~~~l~~l~~---~~~i~s~~~~~~~~-~~l~~~~l~~~~~~~~~~~~--~~~~~~~kpk~~~~~~~~ 153 (229)
T 2fdr_A 80 MRLERDVKIIDGVKFALSRLTT---PRCICSNSSSHRLD-MMLTKVGLKPYFAPHIYSAK--DLGADRVKPKPDIFLHGA 153 (229)
T ss_dssp HHHHHHCCBCTTHHHHHHHCCS---CEEEEESSCHHHHH-HHHHHTTCGGGTTTCEEEHH--HHCTTCCTTSSHHHHHHH
T ss_pred HHhhcCCccCcCHHHHHHHhCC---CEEEEECCChhHHH-HHHHhCChHHhccceEEecc--ccccCCCCcCHHHHHHHH
Confidence 2222346789999999988864 89999997665544 457778899999 9999888 77888 99999999999
Q ss_pred HHcCCCCCCCCcEEEEecCHHHHHHHHHcCCeEEEEcCCCCC-----ccccc-chhhhhhhhcccCCCCCCC
Q 026543 164 KRFEGGPIDSQEILVFEDAPSGVLAAKNAGMSVVMVPDPRLD-----SSYHS-NADQLLSSLLGFNPKDWGL 229 (237)
Q Consensus 164 ~~~~~~~~~~~~~~~igD~~~Di~~a~~~G~~~i~v~~~~~~-----~~~~~-~~~~~~~~~~el~~~l~~l 229 (237)
+++| ++|+++++|||+.||+++|+.+|+.++++..+... +..+. +++++++++.|+...+..+
T Consensus 154 ~~l~---~~~~~~i~iGD~~~Di~~a~~aG~~~i~~~~~~~~~~~~~~~l~~~~ad~v~~~~~el~~~l~~~ 222 (229)
T 2fdr_A 154 AQFG---VSPDRVVVVEDSVHGIHGARAAGMRVIGFTGASHTYPSHADRLTDAGAETVISRMQDLPAVIAAM 222 (229)
T ss_dssp HHHT---CCGGGEEEEESSHHHHHHHHHTTCEEEEECCSTTCCTTHHHHHHHHTCSEEESCGGGHHHHHHHH
T ss_pred HHcC---CChhHeEEEcCCHHHHHHHHHCCCEEEEEecCCccchhhhHHHhhcCCceeecCHHHHHHHHHHh
Confidence 9999 99999999999999999999999999999876552 11222 4899999999986655433
|
| >3um9_A Haloacid dehalogenase, type II; haloacid dehalogenase-like hydrolase protein superfamily, defluorinase, hydrolase; 2.19A {Polaromonas SP} | Back alignment and structure |
|---|
Probab=99.97 E-value=4e-31 Score=199.42 Aligned_cols=209 Identities=16% Similarity=0.209 Sum_probs=154.8
Q ss_pred CCCccEEEEecCcccccchhhHHHHHHHHHHHcCCCCCH---------HHHHHhcCCC------hHHHHHHHHHHhCCCC
Q 026543 7 KKPITHVIFDMDGLLLDTEKFYTEVQELILARYNKTFDW---------SLKAKMMGKK------AIEAAQVFVEETGISD 71 (237)
Q Consensus 7 ~~~~~~vifD~DGTL~~~~~~~~~~~~~~~~~~g~~~~~---------~~~~~~~~~~------~~~~~~~~~~~~~~~~ 71 (237)
|+++|+|+||+||||+++...+...+..+ ...+..... .......+.. ....+..+.+.++..
T Consensus 2 M~~~k~i~fDlDGTL~d~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 79 (230)
T 3um9_A 2 MHAIKAVVFDLYGTLYDVYSVRTSCERIF-PGQGEMVSKMWRQKQLEYTWMRTLMGQYQDFESATLDALRYTCGSLGLA- 79 (230)
T ss_dssp CSSCCEEEECSBTTTBCGGGGHHHHHHHS-TTCHHHHHHHHHHHHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHTCC-
T ss_pred CCCceEEEEcCCCCcCcchHHHHHHHHHh-cccHHHHHHHHHHHHHHHHHHHHhhccccCHHHHHHHHHHHHHHHcCCC-
Confidence 56789999999999999987655444321 111100000 0001111110 133445566677766
Q ss_pred CCCHHHHHHHHHHHHHhhcCCCCCCccHHHHHHHHHhCCCCEEEEeCChhhHHHHHHhhhhhhhhhcceeeeCCCCCccC
Q 026543 72 KLSAEDFLVQREETLQTLFPTSELMPGASHLIRHLHAKGIPMCVATGSLARHFELKTQKHRELFSLMHHVVRGDDPEVKQ 151 (237)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~v~i~s~~~~~~~~~~~~~~~gl~~~f~~~~~~~~~~~~~ 151 (237)
...+....... ......++|++.++++.|+++|++++++||+...... ..++..|+..+|+.+++++ ..+.
T Consensus 80 -~~~~~~~~~~~-----~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~-~~l~~~~l~~~f~~~~~~~--~~~~ 150 (230)
T 3um9_A 80 -LDADGEAHLCS-----EYLSLTPFADVPQALQQLRAAGLKTAILSNGSRHSIR-QVVGNSGLTNSFDHLISVD--EVRL 150 (230)
T ss_dssp -CCHHHHHHHHH-----HTTSCCBCTTHHHHHHHHHHTTCEEEEEESSCHHHHH-HHHHHHTCGGGCSEEEEGG--GTTC
T ss_pred -CCHHHHHHHHH-----HHhcCCCCCCHHHHHHHHHhCCCeEEEEeCCCHHHHH-HHHHHCCChhhcceeEehh--hccc
Confidence 44444333222 2256889999999999999999999999997765554 5677889999999999998 8889
Q ss_pred CCCCHHHHHHHHHHcCCCCCCCCcEEEEecCHHHHHHHHHcCCeEEEEcCCCC-CcccccchhhhhhhhcccCCCCCCC
Q 026543 152 GKPSPDIFLAAAKRFEGGPIDSQEILVFEDAPSGVLAAKNAGMSVVMVPDPRL-DSSYHSNADQLLSSLLGFNPKDWGL 229 (237)
Q Consensus 152 ~kp~~~~~~~~l~~~~~~~~~~~~~~~igD~~~Di~~a~~~G~~~i~v~~~~~-~~~~~~~~~~~~~~~~el~~~l~~l 229 (237)
.||++..+..+++++| ++|++|++|||+.+|+++|+.+|+.++++.++.. .+.....++++++++.|+...+..+
T Consensus 151 ~kp~~~~~~~~~~~~~---~~~~~~~~iGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~~~l~~~ 226 (230)
T 3um9_A 151 FKPHQKVYELAMDTLH---LGESEILFVSCNSWDATGAKYFGYPVCWINRSNGVFDQLGVVPDIVVSDVGVLASRFSPV 226 (230)
T ss_dssp CTTCHHHHHHHHHHHT---CCGGGEEEEESCHHHHHHHHHHTCCEEEECTTSCCCCCSSCCCSEEESSHHHHHHTCCC-
T ss_pred CCCChHHHHHHHHHhC---CCcccEEEEeCCHHHHHHHHHCCCEEEEEeCCCCccccccCCCcEEeCCHHHHHHHHHHh
Confidence 9999999999999999 9999999999999999999999999999998755 3344678999999999998776554
|
| >2hoq_A Putative HAD-hydrolase PH1655; haloacid dehalogenase, structural genomics, NPPSFA, national on protein structural and functional analyses; 1.70A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=99.97 E-value=5.4e-31 Score=200.47 Aligned_cols=209 Identities=20% Similarity=0.169 Sum_probs=154.4
Q ss_pred ccEEEEecCcccccchhhHHHHHHHHHHHcC---CCCCHHHHHHhc--C-----CChHHHHHHHHHHh-CCCCCCCHHHH
Q 026543 10 ITHVIFDMDGLLLDTEKFYTEVQELILARYN---KTFDWSLKAKMM--G-----KKAIEAAQVFVEET-GISDKLSAEDF 78 (237)
Q Consensus 10 ~~~vifD~DGTL~~~~~~~~~~~~~~~~~~g---~~~~~~~~~~~~--~-----~~~~~~~~~~~~~~-~~~~~~~~~~~ 78 (237)
+|+|+||+||||+++...+...+..++++++ ............ + ......+..+...+ +.. . ....
T Consensus 2 ~k~iiFDlDGTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~--~-~~~~ 78 (241)
T 2hoq_A 2 VKVIFFDLDDTLVDTSKLAEIARKNAIENMIRHGLPVDFETAYSELIELIKEYGSNFPYHFDYLLRRLDLPY--N-PKWI 78 (241)
T ss_dssp CCEEEECSBTTTBCHHHHHHHHHHHHHHHHHHTTCCSCHHHHHHHHHHHHHHHCTTCTTHHHHHHHHTTCCC--C-HHHH
T ss_pred ccEEEEcCCCCCCCChhhHHHHHHHHHHHHHHccccccHHHHHHHHHHhhcccchhHHHHHHHHHHHhcCCc--c-chHH
Confidence 6899999999999999988888888888764 343433322111 1 01112234445554 443 2 1222
Q ss_pred HHHHHHHHHhhcCCCCCCccHHHHHHHHHhCCCCEEEEeCChhhHHHHHHhhhhhhhhhcceeeeCCCCCccCCCCCHHH
Q 026543 79 LVQREETLQTLFPTSELMPGASHLIRHLHAKGIPMCVATGSLARHFELKTQKHRELFSLMHHVVRGDDPEVKQGKPSPDI 158 (237)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~v~i~s~~~~~~~~~~~~~~~gl~~~f~~~~~~~~~~~~~~kp~~~~ 158 (237)
......+.........++|++.++++.|+++|++++++||+...... ..++..|+..+|+.+++++ ..+..||++..
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~-~~l~~~~l~~~f~~~~~~~--~~~~~Kp~~~~ 155 (241)
T 2hoq_A 79 SAGVIAYHNTKFAYLREVPGARKVLIRLKELGYELGIITDGNPVKQW-EKILRLELDDFFEHVIISD--FEGVKKPHPKI 155 (241)
T ss_dssp HHHHHHHHHHHHHHCCBCTTHHHHHHHHHHHTCEEEEEECSCHHHHH-HHHHHTTCGGGCSEEEEGG--GGTCCTTCHHH
T ss_pred HHHHHHHHHHHHhhCCCCccHHHHHHHHHHCCCEEEEEECCCchhHH-HHHHHcCcHhhccEEEEeC--CCCCCCCCHHH
Confidence 22222222222234678999999999999999999999997665444 5677889999999999998 88899999999
Q ss_pred HHHHHHHcCCCCCCCCcEEEEecCH-HHHHHHHHcCCeEEEEcCCCCCcccc---cchhhhhhhhcccCCCCC
Q 026543 159 FLAAAKRFEGGPIDSQEILVFEDAP-SGVLAAKNAGMSVVMVPDPRLDSSYH---SNADQLLSSLLGFNPKDW 227 (237)
Q Consensus 159 ~~~~l~~~~~~~~~~~~~~~igD~~-~Di~~a~~~G~~~i~v~~~~~~~~~~---~~~~~~~~~~~el~~~l~ 227 (237)
|..+++++| ++|++|++|||+. ||+++|+.+|+.+++|.++....... ..++++++++.|+...+.
T Consensus 156 ~~~~~~~~g---~~~~~~i~iGD~~~~Di~~a~~aG~~~~~v~~g~~~~~~~~~~~~~~~~i~~~~el~~~l~ 225 (241)
T 2hoq_A 156 FKKALKAFN---VKPEEALMVGDRLYSDIYGAKRVGMKTVWFRYGKHSERELEYRKYADYEIDNLESLLEVLA 225 (241)
T ss_dssp HHHHHHHHT---CCGGGEEEEESCTTTTHHHHHHTTCEEEEECCSCCCHHHHTTGGGCSEEESSTTHHHHHHH
T ss_pred HHHHHHHcC---CCcccEEEECCCchHhHHHHHHCCCEEEEECCCCCCcccccccCCCCEEECCHHHHHHHHH
Confidence 999999999 9999999999998 99999999999999997765533222 378889999998865553
|
| >3k1z_A Haloacid dehalogenase-like hydrolase domain-conta protein 3; HDHD3, haloacid dehalogenase-like hydrolase domain containin structural genomics; 1.55A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.97 E-value=1.7e-30 Score=200.33 Aligned_cols=209 Identities=16% Similarity=0.139 Sum_probs=166.1
Q ss_pred ccEEEEecCcccccchhhHHHHHHHHHHHcCCCCCHHHHHHh------------------cCCChHHH----HHHHHHHh
Q 026543 10 ITHVIFDMDGLLLDTEKFYTEVQELILARYNKTFDWSLKAKM------------------MGKKAIEA----AQVFVEET 67 (237)
Q Consensus 10 ~~~vifD~DGTL~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~------------------~~~~~~~~----~~~~~~~~ 67 (237)
+|+|+||+||||+++...+...+..+++++|.....+.+... .|...... ++..+...
T Consensus 1 ik~iiFDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 80 (263)
T 3k1z_A 1 MRLLTWDVKDTLLRLRHPLGEAYATKARAHGLEVEPSALEQGFRQAYRAQSHSFPNYGLSHGLTSRQWWLDVVLQTFHLA 80 (263)
T ss_dssp CCEEEECCBTTTEEESSCHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHSTGGGGGGTCCHHHHHHHHHHHHHHHT
T ss_pred CcEEEEcCCCceeCCCCCHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHhhhhccccccccCCCHHHHHHHHHHHHHHHc
Confidence 589999999999999988889999999999998776554331 23333332 33344444
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhcC--CCCCCccHHHHHHHHHhCCCCEEEEeCChhhHHHHHHhhhhhhhhhcceeeeCC
Q 026543 68 GISDKLSAEDFLVQREETLQTLFP--TSELMPGASHLIRHLHAKGIPMCVATGSLARHFELKTQKHRELFSLMHHVVRGD 145 (237)
Q Consensus 68 ~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~l~~~g~~v~i~s~~~~~~~~~~~~~~~gl~~~f~~~~~~~ 145 (237)
+. .....+.......+..... ...++||+.++|+.|+++|++++|+||+... . ...++.+|+..+|+.+++++
T Consensus 81 ~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~tn~~~~-~-~~~l~~~gl~~~f~~~~~~~ 155 (263)
T 3k1z_A 81 GV---QDAQAVAPIAEQLYKDFSHPCTWQVLDGAEDTLRECRTRGLRLAVISNFDRR-L-EGILGGLGLREHFDFVLTSE 155 (263)
T ss_dssp TC---CCHHHHHHHHHHHHHHTTSGGGEEECTTHHHHHHHHHHTTCEEEEEESCCTT-H-HHHHHHTTCGGGCSCEEEHH
T ss_pred CC---CCHHHHHHHHHHHHHHhcCcccceECcCHHHHHHHHHhCCCcEEEEeCCcHH-H-HHHHHhCCcHHhhhEEEeec
Confidence 44 2355555556666655543 3579999999999999999999999996653 3 45688889999999999998
Q ss_pred CCCccCCCCCHHHHHHHHHHcCCCCCCCCcEEEEecCH-HHHHHHHHcCCeEEEEcCCCCCcc---cccchhhhhhhhcc
Q 026543 146 DPEVKQGKPSPDIFLAAAKRFEGGPIDSQEILVFEDAP-SGVLAAKNAGMSVVMVPDPRLDSS---YHSNADQLLSSLLG 221 (237)
Q Consensus 146 ~~~~~~~kp~~~~~~~~l~~~~~~~~~~~~~~~igD~~-~Di~~a~~~G~~~i~v~~~~~~~~---~~~~~~~~~~~~~e 221 (237)
+.+..||++..|..+++++| ++|++|++|||+. +|+++|+.+|+.++++..+..... ....++++++++.|
T Consensus 156 --~~~~~Kp~~~~~~~~~~~~g---~~~~~~~~vGD~~~~Di~~a~~aG~~~i~~~~~~~~~~~~~~~~~ad~v~~~l~e 230 (263)
T 3k1z_A 156 --AAGWPKPDPRIFQEALRLAH---MEPVVAAHVGDNYLCDYQGPRAVGMHSFLVVGPQALDPVVRDSVPKEHILPSLAH 230 (263)
T ss_dssp --HHSSCTTSHHHHHHHHHHHT---CCGGGEEEEESCHHHHTHHHHTTTCEEEEECCSSCCCHHHHHHSCGGGEESSGGG
T ss_pred --ccCCCCCCHHHHHHHHHHcC---CCHHHEEEECCCcHHHHHHHHHCCCEEEEEcCCCCCchhhcccCCCceEeCCHHH
Confidence 88899999999999999999 9999999999997 999999999999999998765322 33579999999999
Q ss_pred cCCCCCC
Q 026543 222 FNPKDWG 228 (237)
Q Consensus 222 l~~~l~~ 228 (237)
+...+..
T Consensus 231 l~~~l~~ 237 (263)
T 3k1z_A 231 LLPALDC 237 (263)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9766543
|
| >3d6j_A Putative haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides fragilis nctc 9343} | Back alignment and structure |
|---|
Probab=99.97 E-value=1.7e-30 Score=195.01 Aligned_cols=213 Identities=19% Similarity=0.234 Sum_probs=158.7
Q ss_pred CCccEEEEecCcccccchhhHHHHHHHHHHHcCCC-CCHHHHHHhcCCChHHHHHHHHHHhCCCCCCCHHHHHHHHHHHH
Q 026543 8 KPITHVIFDMDGLLLDTEKFYTEVQELILARYNKT-FDWSLKAKMMGKKAIEAAQVFVEETGISDKLSAEDFLVQREETL 86 (237)
Q Consensus 8 ~~~~~vifD~DGTL~~~~~~~~~~~~~~~~~~g~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (237)
|++|+|+||+||||+++...+...+.++++++|.. .....+....|.+.....+.+.. .........+...+...+
T Consensus 4 M~~k~v~fDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~ 80 (225)
T 3d6j_A 4 MKYTVYLFDFDYTLADSSRGIVTCFRSVLERHGYTGITDDMIKRTIGKTLEESFSILTG---ITDADQLESFRQEYSKEA 80 (225)
T ss_dssp -CCSEEEECCBTTTEECHHHHHHHHHHHHHHTTCCCCCHHHHHTTTTSCHHHHHHHHHC---CCCHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCCCCCCHHHHHHHHHHHHHHhCCCCCCHHHHHHHhCCcHHHHHHHHcC---CCCHHHHHHHHHHHHHHH
Confidence 35899999999999999998899999999999885 44555666667766555544432 111011122222222223
Q ss_pred Hhh-cCCCCCCccHHHHHHHHHhCCCCEEEEeCChhhHHHHHHhhhhhhhhhcceeeeCCCCCccCCCCCHHHHHHHHHH
Q 026543 87 QTL-FPTSELMPGASHLIRHLHAKGIPMCVATGSLARHFELKTQKHRELFSLMHHVVRGDDPEVKQGKPSPDIFLAAAKR 165 (237)
Q Consensus 87 ~~~-~~~~~~~~~~~~~l~~l~~~g~~v~i~s~~~~~~~~~~~~~~~gl~~~f~~~~~~~~~~~~~~kp~~~~~~~~l~~ 165 (237)
... .....+.+++.++++.++++|++++++|++...... ..++..++..+|+.+++++ ..+..||++..+..++++
T Consensus 81 ~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~-~~~~~~~~~~~~~~~~~~~--~~~~~k~~~~~~~~~~~~ 157 (225)
T 3d6j_A 81 DIYMNANTILFPDTLPTLTHLKKQGIRIGIISTKYRFRIL-SFLRNHMPDDWFDIIIGGE--DVTHHKPDPEGLLLAIDR 157 (225)
T ss_dssp HHHTGGGCEECTTHHHHHHHHHHHTCEEEEECSSCHHHHH-HHHHTSSCTTCCSEEECGG--GCSSCTTSTHHHHHHHHH
T ss_pred HHhccccCccCcCHHHHHHHHHHCCCeEEEEECCCHHHHH-HHHHHcCchhheeeeeehh--hcCCCCCChHHHHHHHHH
Confidence 222 234678999999999999999999999997655444 4567778888999999888 777889999999999999
Q ss_pred cCCCCCCCCcEEEEecCHHHHHHHHHcCCeEEEEcCCCCCc-cc-ccchhhhhhhhcccCCCCCCC
Q 026543 166 FEGGPIDSQEILVFEDAPSGVLAAKNAGMSVVMVPDPRLDS-SY-HSNADQLLSSLLGFNPKDWGL 229 (237)
Q Consensus 166 ~~~~~~~~~~~~~igD~~~Di~~a~~~G~~~i~v~~~~~~~-~~-~~~~~~~~~~~~el~~~l~~l 229 (237)
+| ++++++++|||+.||++||+.+|+.++++.++.... .. ...++++++++.|+...+..+
T Consensus 158 ~~---~~~~~~i~iGD~~nDi~~~~~aG~~~~~~~~~~~~~~~l~~~~ad~v~~~~~el~~~l~~~ 220 (225)
T 3d6j_A 158 LK---ACPEEVLYIGDSTVDAGTAAAAGVSFTGVTSGMTTAQEFQAYPYDRIISTLGQLISVPEDK 220 (225)
T ss_dssp TT---CCGGGEEEEESSHHHHHHHHHHTCEEEEETTSSCCTTGGGGSCCSEEESSGGGGC------
T ss_pred hC---CChHHeEEEcCCHHHHHHHHHCCCeEEEECCCCCChHHHhhcCCCEEECCHHHHHHhhhhh
Confidence 99 999999999999999999999999999998875532 22 334899999999997776443
|
| >1yns_A E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo sapiens} SCOP: c.108.1.22 PDB: 1zs9_A | Back alignment and structure |
|---|
Probab=99.97 E-value=1.5e-30 Score=200.32 Aligned_cols=130 Identities=13% Similarity=0.167 Sum_probs=107.7
Q ss_pred HHhhcCCCCCCccHHHHHHHHHhCCCCEEEEeCChhhHHHHHHhh---hhhhhhhcceeeeCCCCCccCCCCCHHHHHHH
Q 026543 86 LQTLFPTSELMPGASHLIRHLHAKGIPMCVATGSLARHFELKTQK---HRELFSLMHHVVRGDDPEVKQGKPSPDIFLAA 162 (237)
Q Consensus 86 ~~~~~~~~~~~~~~~~~l~~l~~~g~~v~i~s~~~~~~~~~~~~~---~~gl~~~f~~~~~~~~~~~~~~kp~~~~~~~~ 162 (237)
+........++||+.++|+.|+++|++++|+||+...... ..++ ..|+..+|+.+++++ .+ +||+|..|..+
T Consensus 122 ~~~~~~~~~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~-~~l~~~~~~~l~~~fd~i~~~~---~~-~KP~p~~~~~~ 196 (261)
T 1yns_A 122 FTAGRMKAEFFADVVPAVRKWREAGMKVYIYSSGSVEAQK-LLFGHSTEGDILELVDGHFDTK---IG-HKVESESYRKI 196 (261)
T ss_dssp HHTTSCCBCCCTTHHHHHHHHHHTTCEEEEECSSCHHHHH-HHHHTBTTBCCGGGCSEEECGG---GC-CTTCHHHHHHH
T ss_pred HHhCCcccccCcCHHHHHHHHHhCCCeEEEEeCCCHHHHH-HHHHhhcccChHhhccEEEecC---CC-CCCCHHHHHHH
Confidence 3333355789999999999999999999999997766444 3455 346999999998774 45 99999999999
Q ss_pred HHHcCCCCCCCCcEEEEecCHHHHHHHHHcCCeEEEEcCCCCCc--ccccchhhhhhhhcccC
Q 026543 163 AKRFEGGPIDSQEILVFEDAPSGVLAAKNAGMSVVMVPDPRLDS--SYHSNADQLLSSLLGFN 223 (237)
Q Consensus 163 l~~~~~~~~~~~~~~~igD~~~Di~~a~~~G~~~i~v~~~~~~~--~~~~~~~~~~~~~~el~ 223 (237)
++++| ++|++|+||||+.+|+.+|+++|+.+++|.++.... .....++++++++.|+.
T Consensus 197 ~~~lg---~~p~~~l~VgDs~~di~aA~~aG~~~i~v~~~~~~~~~~~~~~~~~~i~~l~el~ 256 (261)
T 1yns_A 197 ADSIG---CSTNNILFLTDVTREASAAEEADVHVAVVVRPGNAGLTDDEKTYYSLITSFSELY 256 (261)
T ss_dssp HHHHT---SCGGGEEEEESCHHHHHHHHHTTCEEEEECCTTCCCCCHHHHHHSCEESSGGGCB
T ss_pred HHHhC---cCcccEEEEcCCHHHHHHHHHCCCEEEEEeCCCCCcccccccCCCEEECCHHHhC
Confidence 99999 999999999999999999999999999997754422 22356889999999984
|
| >3umb_A Dehalogenase-like hydrolase; 2.20A {Ralstonia solanacearum} | Back alignment and structure |
|---|
Probab=99.97 E-value=1.5e-30 Score=196.73 Aligned_cols=208 Identities=15% Similarity=0.196 Sum_probs=152.8
Q ss_pred CCCccEEEEecCcccccchhhHHHHHHHHHHHcCCCCCH---------HHHHHhc----C--CC----hHHHHHHHHHHh
Q 026543 7 KKPITHVIFDMDGLLLDTEKFYTEVQELILARYNKTFDW---------SLKAKMM----G--KK----AIEAAQVFVEET 67 (237)
Q Consensus 7 ~~~~~~vifD~DGTL~~~~~~~~~~~~~~~~~~g~~~~~---------~~~~~~~----~--~~----~~~~~~~~~~~~ 67 (237)
|+++|+|+||+||||+++...+.... +.+...+..... ....... + .. ....+..+...+
T Consensus 1 M~~~k~i~FDlDGTL~d~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (233)
T 3umb_A 1 MTSIRAVVFDAYGTLFDVYSVAARAE-QLFPGKGEALSVLWRDRQIDYTRIRSLAGPSGEHYKPFWDVTVDALRYACARL 79 (233)
T ss_dssp -CCCCEEEECSBTTTEETHHHHHHHH-HHSTTCHHHHHHHHHHHHHHHHHHHHHHCTTSTTCCCHHHHHHHHHHHHHHHT
T ss_pred CCCceEEEEeCCCcccccHHHHHHHH-HHhccchhhhhHHHHhhhhHHHHHHHhcccccCCCCCHHHHHHHHHHHHHHHc
Confidence 45789999999999999876544333 222111110000 0000111 1 11 123345566667
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhcCCCCCCccHHHHHHHHHhCCCCEEEEeCChhhHHHHHHhhhhhhhhhcceeeeCCCC
Q 026543 68 GISDKLSAEDFLVQREETLQTLFPTSELMPGASHLIRHLHAKGIPMCVATGSLARHFELKTQKHRELFSLMHHVVRGDDP 147 (237)
Q Consensus 68 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~v~i~s~~~~~~~~~~~~~~~gl~~~f~~~~~~~~~ 147 (237)
+.. ...+........+ ....++|++.++++.|+++|++++++||+...... ..++.+|+..+|+.+++++
T Consensus 80 g~~--~~~~~~~~~~~~~-----~~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~-~~l~~~~l~~~f~~~~~~~-- 149 (233)
T 3umb_A 80 NLP--LGNHAEATLMREY-----ACLSAFPENVPVLRQLREMGLPLGILSNGNPQMLE-IAVKSAGMSGLFDHVLSVD-- 149 (233)
T ss_dssp TCC--CCHHHHHHHHHHH-----HSCEECTTHHHHHHHHHTTTCCEEEEESSCHHHHH-HHHHTTTCTTTCSEEEEGG--
T ss_pred CCC--CCHHHHHHHHHHH-----hcCCCCCCHHHHHHHHHhCCCcEEEEeCCCHHHHH-HHHHHCCcHhhcCEEEEec--
Confidence 766 5555444433332 24789999999999999999999999997766554 4677889999999999998
Q ss_pred CccCCCCCHHHHHHHHHHcCCCCCCCCcEEEEecCHHHHHHHHHcCCeEEEEcCCCC-CcccccchhhhhhhhcccCCCC
Q 026543 148 EVKQGKPSPDIFLAAAKRFEGGPIDSQEILVFEDAPSGVLAAKNAGMSVVMVPDPRL-DSSYHSNADQLLSSLLGFNPKD 226 (237)
Q Consensus 148 ~~~~~kp~~~~~~~~l~~~~~~~~~~~~~~~igD~~~Di~~a~~~G~~~i~v~~~~~-~~~~~~~~~~~~~~~~el~~~l 226 (237)
..+..||++..+..+++++| ++|++|++|||+.+|+++|+.+|+.+++|.++.. .+.....++++++++.|+...+
T Consensus 150 ~~~~~kp~~~~~~~~~~~~~---~~~~~~~~vGD~~~Di~~a~~~G~~~~~v~~~~~~~~~~~~~~~~v~~~~~el~~~l 226 (233)
T 3umb_A 150 AVRLYKTAPAAYALAPRAFG---VPAAQILFVSSNGWDACGATWHGFTTFWINRLGHPPEALDVAPAAAGHDMRDLLQFV 226 (233)
T ss_dssp GTTCCTTSHHHHTHHHHHHT---SCGGGEEEEESCHHHHHHHHHHTCEEEEECTTCCCCCSSSCCCSEEESSHHHHHHHH
T ss_pred ccCCCCcCHHHHHHHHHHhC---CCcccEEEEeCCHHHHHHHHHcCCEEEEEcCCCCCchhccCCCCEEECCHHHHHHHH
Confidence 88899999999999999999 9999999999999999999999999999998765 3334677999999999997665
Q ss_pred CC
Q 026543 227 WG 228 (237)
Q Consensus 227 ~~ 228 (237)
.+
T Consensus 227 ~~ 228 (233)
T 3umb_A 227 QA 228 (233)
T ss_dssp HC
T ss_pred HH
Confidence 44
|
| >3ddh_A Putative haloacid dehalogenase-like family hydrol; hydrolase, HAD superfamily, ST genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=99.97 E-value=8.3e-30 Score=192.30 Aligned_cols=207 Identities=17% Similarity=0.161 Sum_probs=152.0
Q ss_pred CCCC-ccEEEEecCcccccchhhHHHHHHHHHHHcCCCCCHHHHH-----------HhcCCChHHH----HHHHHHHhCC
Q 026543 6 SKKP-ITHVIFDMDGLLLDTEKFYTEVQELILARYNKTFDWSLKA-----------KMMGKKAIEA----AQVFVEETGI 69 (237)
Q Consensus 6 ~~~~-~~~vifD~DGTL~~~~~~~~~~~~~~~~~~g~~~~~~~~~-----------~~~~~~~~~~----~~~~~~~~~~ 69 (237)
.|++ +|+|+||+||||+++...+...+..+++.+.......... ...+.+.... .+......+.
T Consensus 3 ~M~~mik~i~fDlDGTL~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (234)
T 3ddh_A 3 AMKELIKVIAFDADDTLWSNEPFFQEVEKQYTDLLKPYGTSKEISAALFQTEMNNLQILGYGAKAFTISMVETALQISNG 82 (234)
T ss_dssp CCTTTCCEEEECCBTTTBCCHHHHHHHHHHHHHHTGGGSCHHHHHHHHHHHHHHTHHHHCSSHHHHHHHHHHHHHHHTTT
T ss_pred chhhcccEEEEeCCCCCccCcchHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhhhhhcCCcchhHHHHHHHHHHHhcC
Confidence 3555 8999999999999999888777766655443221222211 2334443332 2333333444
Q ss_pred CCCCCHHHHHHHHHHHHHhhcCCCCCCccHHHHHHHHHhCC-CCEEEEeCChhhHHHHHHhhhhhhhhhcceeeeCCCCC
Q 026543 70 SDKLSAEDFLVQREETLQTLFPTSELMPGASHLIRHLHAKG-IPMCVATGSLARHFELKTQKHRELFSLMHHVVRGDDPE 148 (237)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g-~~v~i~s~~~~~~~~~~~~~~~gl~~~f~~~~~~~~~~ 148 (237)
. ...+........+.+.......++|++.++++.|+++| ++++++||+...... ..++..|+..+|+.++++.
T Consensus 83 ~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~~i~t~~~~~~~~-~~l~~~~~~~~f~~~~~~~--- 156 (234)
T 3ddh_A 83 K--IAADIIRQIVDLGKSLLKMPIELLPGVKETLKTLKETGKYKLVVATKGDLLDQE-NKLERSGLSPYFDHIEVMS--- 156 (234)
T ss_dssp C--CCHHHHHHHHHHHHHHTTCCCCBCTTHHHHHHHHHHHCCCEEEEEEESCHHHHH-HHHHHHTCGGGCSEEEEES---
T ss_pred C--CCHHHHHHHHHHHHHHhhccCCcCccHHHHHHHHHhCCCeEEEEEeCCchHHHH-HHHHHhCcHhhhheeeecC---
Confidence 4 55666666666555555666889999999999999999 999999986665444 5677788999999988654
Q ss_pred ccCCCCCHHHHHHHHHHcCCCCCCCCcEEEEecCH-HHHHHHHHcCCeEEEEcCCC----CCcc-cccchhhhhhhhccc
Q 026543 149 VKQGKPSPDIFLAAAKRFEGGPIDSQEILVFEDAP-SGVLAAKNAGMSVVMVPDPR----LDSS-YHSNADQLLSSLLGF 222 (237)
Q Consensus 149 ~~~~kp~~~~~~~~l~~~~~~~~~~~~~~~igD~~-~Di~~a~~~G~~~i~v~~~~----~~~~-~~~~~~~~~~~~~el 222 (237)
||++..+..+++++| ++|++|++|||+. +|+++|+.+|+.+++|.++. .... ....++++++++.|+
T Consensus 157 ----kpk~~~~~~~~~~lg---i~~~~~i~iGD~~~~Di~~a~~aG~~~v~v~~~~~~g~~~~~~~~~~~d~v~~~l~el 229 (234)
T 3ddh_A 157 ----DKTEKEYLRLLSILQ---IAPSELLMVGNSFKSDIQPVLSLGGYGVHIPFEVMWKHEVTETFAHERLKQVKRLDDL 229 (234)
T ss_dssp ----CCSHHHHHHHHHHHT---CCGGGEEEEESCCCCCCHHHHHHTCEEEECCCCTTCCCC---CCCCTTEEECSSGGGH
T ss_pred ----CCCHHHHHHHHHHhC---CCcceEEEECCCcHHHhHHHHHCCCeEEEecCCcccccCCcccccCCCceecccHHHH
Confidence 899999999999999 9999999999997 99999999999999995543 2222 233459999999998
Q ss_pred CCC
Q 026543 223 NPK 225 (237)
Q Consensus 223 ~~~ 225 (237)
...
T Consensus 230 ~~~ 232 (234)
T 3ddh_A 230 LSL 232 (234)
T ss_dssp HHH
T ss_pred HHh
Confidence 654
|
| >1swv_A Phosphonoacetaldehyde hydrolase; HAD enzyme superfamily, phosphonotase, metal binding; 2.30A {Bacillus cereus} SCOP: c.108.1.3 PDB: 1sww_A 2iof_A* 2ioh_A 1rql_A 1rqn_A 2iof_K* 1rdf_A 1fez_A | Back alignment and structure |
|---|
Probab=99.97 E-value=1.4e-29 Score=195.42 Aligned_cols=211 Identities=20% Similarity=0.190 Sum_probs=162.5
Q ss_pred CCccEEEEecCcccccchh-hHHHHHHHHHHHcCCCCCHHHHHHhcCCChHHHHHHH----------HHHhCCCCCCCHH
Q 026543 8 KPITHVIFDMDGLLLDTEK-FYTEVQELILARYNKTFDWSLKAKMMGKKAIEAAQVF----------VEETGISDKLSAE 76 (237)
Q Consensus 8 ~~~~~vifD~DGTL~~~~~-~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~ 76 (237)
|++|+|+||+||||+++.. .+...+..+++++|.....+......|.........+ ...++.. ....
T Consensus 4 m~ik~i~fDlDGTLld~~~~~~~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~ 81 (267)
T 1swv_A 4 MKIEAVIFAWAGTTVDYGCFAPLEVFMEIFHKRGVAITAEEARKPMGLLKIDHVRALTEMPRIASEWNRVFRQL--PTEA 81 (267)
T ss_dssp -CCCEEEECSBTTTBSTTCCTTHHHHHHHHHTTTCCCCHHHHHTTTTSCHHHHHHHHHHSHHHHHHHHHHHSSC--CCHH
T ss_pred CCceEEEEecCCCEEeCCCccHHHHHHHHHHHcCCCCCHHHHHHHhccchHHHHHHhcccHHHHHHHHHHhCCC--CCHH
Confidence 3589999999999999988 6788999999999998777777677776655444333 2234443 3444
Q ss_pred HHHHHHH---HH-HHhhcCCCCCCccHHHHHHHHHhCCCCEEEEeCChhhHHHHHHhhhhhhhhhc-ceeeeCCCCCccC
Q 026543 77 DFLVQRE---ET-LQTLFPTSELMPGASHLIRHLHAKGIPMCVATGSLARHFELKTQKHRELFSLM-HHVVRGDDPEVKQ 151 (237)
Q Consensus 77 ~~~~~~~---~~-~~~~~~~~~~~~~~~~~l~~l~~~g~~v~i~s~~~~~~~~~~~~~~~gl~~~f-~~~~~~~~~~~~~ 151 (237)
....... .. .........++|++.++++.|+++|++++++||+...... ..++.+|+..+| +.+++++ ....
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~-~~l~~~~~~~~~~~~~~~~~--~~~~ 158 (267)
T 1swv_A 82 DIQEMYEEFEEILFAILPRYASPINGVKEVIASLRERGIKIGSTTGYTREMMD-IVAKEAALQGYKPDFLVTPD--DVPA 158 (267)
T ss_dssp HHHHHHHHHHHHHHHHGGGGCCBCTTHHHHHHHHHHTTCEEEEBCSSCHHHHH-HHHHHHHHTTCCCSCCBCGG--GSSC
T ss_pred HHHHHHHHHHHHHHHhhccccccCccHHHHHHHHHHcCCeEEEEcCCCHHHHH-HHHHHcCCcccChHheecCC--ccCC
Confidence 3333222 22 2223345778999999999999999999999997655444 456777888886 8888888 7788
Q ss_pred CCCCHHHHHHHHHHcCCCCCCC-CcEEEEecCHHHHHHHHHcCCeEEEEcCCCCC------------------------c
Q 026543 152 GKPSPDIFLAAAKRFEGGPIDS-QEILVFEDAPSGVLAAKNAGMSVVMVPDPRLD------------------------S 206 (237)
Q Consensus 152 ~kp~~~~~~~~l~~~~~~~~~~-~~~~~igD~~~Di~~a~~~G~~~i~v~~~~~~------------------------~ 206 (237)
.||++..+..+++++| +++ ++|++|||+.||+++|+.+|+.+++|.+++.. +
T Consensus 159 ~kp~~~~~~~~~~~lg---i~~~~~~i~iGD~~nDi~~a~~aG~~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (267)
T 1swv_A 159 GRPYPWMCYKNAMELG---VYPMNHMIKVGDTVSDMKEGRNAGMWTVGVILGSSELGLTEEEVENMDSVELREKIEVVRN 235 (267)
T ss_dssp CTTSSHHHHHHHHHHT---CCSGGGEEEEESSHHHHHHHHHTTSEEEEECTTCTTTCCCHHHHHHSCHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHhC---CCCCcCEEEEeCCHHHHHHHHHCCCEEEEEcCCCCccCccHHHHhhchhhhhhhhhhhHHH
Confidence 9999999999999999 999 99999999999999999999999999998762 1
Q ss_pred -ccccchhhhhhhhcccCCCC
Q 026543 207 -SYHSNADQLLSSLLGFNPKD 226 (237)
Q Consensus 207 -~~~~~~~~~~~~~~el~~~l 226 (237)
.....|+++++++.|+...+
T Consensus 236 ~~~~~~ad~v~~~~~el~~~l 256 (267)
T 1swv_A 236 RFVENGAHFTIETMQELESVM 256 (267)
T ss_dssp HHHHTTCSEEESSGGGHHHHH
T ss_pred HHHhcCCceeccCHHHHHHHH
Confidence 12345899999999986554
|
| >2hcf_A Hydrolase, haloacid dehalogenase-like family; NP_662590.1, ST genomics, PSI-2, protein structure initiative; 1.80A {Chlorobaculum tepidum} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=99.97 E-value=1.4e-30 Score=196.93 Aligned_cols=209 Identities=14% Similarity=0.152 Sum_probs=160.0
Q ss_pred CccEEEEecCcccccchhhHHHHHHHHHHH-cCCCCCHHHHHHhcCCChHHHHHHHHHHhCCCCCCC--H---HHHHHHH
Q 026543 9 PITHVIFDMDGLLLDTEKFYTEVQELILAR-YNKTFDWSLKAKMMGKKAIEAAQVFVEETGISDKLS--A---EDFLVQR 82 (237)
Q Consensus 9 ~~~~vifD~DGTL~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~---~~~~~~~ 82 (237)
++|+|+||+||||+++...+...+.+++++ +|.... .......|++....++.++..+++. .. . ..+...+
T Consensus 3 ~~k~iifDlDGTL~d~~~~~~~~~~~~~~~~~g~~~~-~~~~~~~g~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~ 79 (234)
T 2hcf_A 3 SRTLVLFDIDGTLLKVESMNRRVLADALIEVYGTEGS-TGSHDFSGKMDGAIIYEVLSNVGLE--RAEIADKFDKAKETY 79 (234)
T ss_dssp CCEEEEECCBTTTEEECTHHHHHHHHHHHHHHSCCCC-C---CCTTCCHHHHHHHHHHTTTCC--HHHHHHHHHHHHHHH
T ss_pred cceEEEEcCCCCcccCccchHHHHHHHHHHHhCCCCc-cchhhhcCCChHHHHHHHHHHcCCC--cccchhHHHHHHHHH
Confidence 479999999999999999999999998888 787655 4455667777777677777776654 22 1 2222333
Q ss_pred HHHHHhhc--CCCCCCccHHHHHHHHHhC-CCCEEEEeCChhhHHHHHHhhhhhhhhhcceeeeCCCCCcc-CCCCCHHH
Q 026543 83 EETLQTLF--PTSELMPGASHLIRHLHAK-GIPMCVATGSLARHFELKTQKHRELFSLMHHVVRGDDPEVK-QGKPSPDI 158 (237)
Q Consensus 83 ~~~~~~~~--~~~~~~~~~~~~l~~l~~~-g~~v~i~s~~~~~~~~~~~~~~~gl~~~f~~~~~~~~~~~~-~~kp~~~~ 158 (237)
...+.+.. ....++||+.++++.|+++ |++++++||+...... ..++..|+..+|+.+++++ +.. .+||.+..
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~g~~~~i~t~~~~~~~~-~~l~~~~l~~~f~~~~~~~--~~~~~~k~~~~~ 156 (234)
T 2hcf_A 80 IALFRERARREDITLLEGVRELLDALSSRSDVLLGLLTGNFEASGR-HKLKLPGIDHYFPFGAFAD--DALDRNELPHIA 156 (234)
T ss_dssp HHHHHHHCCGGGEEECTTHHHHHHHHHTCTTEEEEEECSSCHHHHH-HHHHTTTCSTTCSCEECTT--TCSSGGGHHHHH
T ss_pred HHHHHHHhccCCCCcCCCHHHHHHHHHhCCCceEEEEcCCcHHHHH-HHHHHCCchhhcCcceecC--CCcCccchHHHH
Confidence 33333322 3467899999999999999 9999999997665544 5677889999999877776 443 45688899
Q ss_pred HHHHHHHcCCCCC--CCCcEEEEecCHHHHHHHHHcCCeEEEEcCCCCCccc--ccchhhhhhhhcccCCCC
Q 026543 159 FLAAAKRFEGGPI--DSQEILVFEDAPSGVLAAKNAGMSVVMVPDPRLDSSY--HSNADQLLSSLLGFNPKD 226 (237)
Q Consensus 159 ~~~~l~~~~~~~~--~~~~~~~igD~~~Di~~a~~~G~~~i~v~~~~~~~~~--~~~~~~~~~~~~el~~~l 226 (237)
+..+++++| . +|++|++|||+.+|+++|+.+|+.+++|.++...... ...++++++++.|+...+
T Consensus 157 ~~~~~~~lg---~~~~~~~~i~iGD~~~Di~~a~~aG~~~i~v~~~~~~~~~~~~~~a~~v~~~~~el~~~l 225 (234)
T 2hcf_A 157 LERARRMTG---ANYSPSQIVIIGDTEHDIRCARELDARSIAVATGNFTMEELARHKPGTLFKNFAETDEVL 225 (234)
T ss_dssp HHHHHHHHC---CCCCGGGEEEEESSHHHHHHHHTTTCEEEEECCSSSCHHHHHTTCCSEEESCSCCHHHHH
T ss_pred HHHHHHHhC---CCCCcccEEEECCCHHHHHHHHHCCCcEEEEcCCCCCHHHHHhCCCCEEeCCHHhHHHHH
Confidence 999999998 4 8999999999999999999999999999987664322 234889999999886544
|
| >2gfh_A Haloacid dehalogenase-like hydrolase domain conta; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.90A {Mus musculus} SCOP: c.108.1.6 PDB: 2w4m_A | Back alignment and structure |
|---|
Probab=99.97 E-value=1.3e-29 Score=195.12 Aligned_cols=211 Identities=16% Similarity=0.166 Sum_probs=151.7
Q ss_pred CCCccEEEEecCcccccchhhHHHHHHHHHHH----cCCCCCHHH-----HHHhcC-------CChHHHH----HHHHHH
Q 026543 7 KKPITHVIFDMDGLLLDTEKFYTEVQELILAR----YNKTFDWSL-----KAKMMG-------KKAIEAA----QVFVEE 66 (237)
Q Consensus 7 ~~~~~~vifD~DGTL~~~~~~~~~~~~~~~~~----~g~~~~~~~-----~~~~~~-------~~~~~~~----~~~~~~ 66 (237)
++++|+|+||+||||+|+...+..++.++++. +|....... .....+ .+..... ...+..
T Consensus 15 ~~~~k~viFDlDGTLvds~~~~~~a~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (260)
T 2gfh_A 15 LSRVRAVFFDLDNTLIDTAGASRRGMLEVIKLLQSKYHYKEEAEIICDKVQVKLSKECFHPYSTCITDVRTSHWEEAIQE 94 (260)
T ss_dssp CCCCCEEEECCBTTTBCHHHHHHHHHHHHHHHHHHTTCCCTHHHHHHHHHHHHHHTCCCC----CHHHHHHHHHHHHHHH
T ss_pred cccceEEEEcCCCCCCCCHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHhhccccccccHHHHHHHHHHHHHHH
Confidence 35689999999999999999888888887764 455432111 111111 1222211 111211
Q ss_pred -hCCCCCCCHHHHHHHHHHHHHhhcCCCCCCccHHHHHHHHHhCCCCEEEEeCChhhHHHHHHhhhhhhhhhcceeeeCC
Q 026543 67 -TGISDKLSAEDFLVQREETLQTLFPTSELMPGASHLIRHLHAKGIPMCVATGSLARHFELKTQKHRELFSLMHHVVRGD 145 (237)
Q Consensus 67 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~v~i~s~~~~~~~~~~~~~~~gl~~~f~~~~~~~ 145 (237)
.+.. ...+.....++.+.........++||+.++|+.|++. ++++|+||+...... ..++.+|+..+|+.+++++
T Consensus 95 ~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~L~~L~~~-~~l~i~Tn~~~~~~~-~~l~~~gl~~~f~~i~~~~ 170 (260)
T 2gfh_A 95 TKGGA--DNRKLAEECYFLWKSTRLQHMILADDVKAMLTELRKE-VRLLLLTNGDRQTQR-EKIEACACQSYFDAIVIGG 170 (260)
T ss_dssp HHCSS--CCHHHHHHHHHHHHHHHHHTCCCCHHHHHHHHHHHTT-SEEEEEECSCHHHHH-HHHHHHTCGGGCSEEEEGG
T ss_pred hcCcc--chHHHHHHHHHHHHHHHHhcCCCCcCHHHHHHHHHcC-CcEEEEECcChHHHH-HHHHhcCHHhhhheEEecC
Confidence 1221 2333333334333333334578999999999999984 999999997765544 5678889999999999998
Q ss_pred CCCccCCCCCHHHHHHHHHHcCCCCCCCCcEEEEecC-HHHHHHHHHcCC-eEEEEcCCCCC-cccccchhhhhhhhccc
Q 026543 146 DPEVKQGKPSPDIFLAAAKRFEGGPIDSQEILVFEDA-PSGVLAAKNAGM-SVVMVPDPRLD-SSYHSNADQLLSSLLGF 222 (237)
Q Consensus 146 ~~~~~~~kp~~~~~~~~l~~~~~~~~~~~~~~~igD~-~~Di~~a~~~G~-~~i~v~~~~~~-~~~~~~~~~~~~~~~el 222 (237)
+.+..||+|..|..+++++| ++|++|+||||+ .+|+++|+++|+ .++++..+... ......++++++++.|+
T Consensus 171 --~~~~~KP~p~~~~~~~~~~~---~~~~~~~~vGDs~~~Di~~A~~aG~~~~i~v~~~~~~~~~~~~~~~~~i~~~~el 245 (260)
T 2gfh_A 171 --EQKEEKPAPSIFYHCCDLLG---VQPGDCVMVGDTLETDIQGGLNAGLKATVWINKSGRVPLTSSPMPHYMVSSVLEL 245 (260)
T ss_dssp --GSSSCTTCHHHHHHHHHHHT---CCGGGEEEEESCTTTHHHHHHHTTCSEEEEECTTCCCCSSCCCCCSEEESSGGGH
T ss_pred --CCCCCCCCHHHHHHHHHHcC---CChhhEEEECCCchhhHHHHHHCCCceEEEEcCCCCCcCcccCCCCEEECCHHHH
Confidence 78889999999999999999 999999999996 899999999999 89999765432 23356789999999998
Q ss_pred CCCC
Q 026543 223 NPKD 226 (237)
Q Consensus 223 ~~~l 226 (237)
...+
T Consensus 246 ~~~l 249 (260)
T 2gfh_A 246 PALL 249 (260)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 6554
|
| >2qlt_A (DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, saccharom cerevisiae, structural genomics, PSI-2, protein structure initiative; 1.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.97 E-value=7.6e-30 Score=197.95 Aligned_cols=204 Identities=22% Similarity=0.236 Sum_probs=157.7
Q ss_pred ccEEEEecCcccccchhhHHHHHHHHHHHcCCCCCH-HHHHHhcCCChHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHh
Q 026543 10 ITHVIFDMDGLLLDTEKFYTEVQELILARYNKTFDW-SLKAKMMGKKAIEAAQVFVEETGISDKLSAEDFLVQREETLQT 88 (237)
Q Consensus 10 ~~~vifD~DGTL~~~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (237)
+|+|+||+||||+++...+...+..+++++|. ... .......|.+.....+.+.... ...+........+...
T Consensus 35 ik~iifDlDGTLlds~~~~~~~~~~~~~~~g~-~~~~~~~~~~~G~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~ 108 (275)
T 2qlt_A 35 INAALFDVDGTIIISQPAIAAFWRDFGKDKPY-FDAEHVIHISHGWRTYDAIAKFAPDF-----ADEEYVNKLEGEIPEK 108 (275)
T ss_dssp ESEEEECCBTTTEECHHHHHHHHHHHHTTCTT-CCHHHHHHHCTTCCHHHHHHHHCGGG-----CCHHHHHHHHHTHHHH
T ss_pred CCEEEECCCCCCCCCHHHHHHHHHHHHHHcCC-CCHHHHHHHhcCCCHHHHHHHHhccC-----CcHHHHHHHHHHHHHH
Confidence 79999999999999999888899999988884 233 3344556777666555543321 2223333333333333
Q ss_pred hcCCCCCCccHHHHHHHHHhC-CCCEEEEeCChhhHHHHHHhhhhhhhhhcceeeeCCCCCccCCCCCHHHHHHHHHHcC
Q 026543 89 LFPTSELMPGASHLIRHLHAK-GIPMCVATGSLARHFELKTQKHRELFSLMHHVVRGDDPEVKQGKPSPDIFLAAAKRFE 167 (237)
Q Consensus 89 ~~~~~~~~~~~~~~l~~l~~~-g~~v~i~s~~~~~~~~~~~~~~~gl~~~f~~~~~~~~~~~~~~kp~~~~~~~~l~~~~ 167 (237)
......+.|++.++++.|+++ |++++++||+...... ..++..++. .|+.+++++ +....||++..+..+++++|
T Consensus 109 ~~~~~~~~~g~~~~L~~l~~~~g~~l~i~T~~~~~~~~-~~l~~~~l~-~f~~i~~~~--~~~~~kp~~~~~~~~~~~lg 184 (275)
T 2qlt_A 109 YGEHSIEVPGAVKLCNALNALPKEKWAVATSGTRDMAK-KWFDILKIK-RPEYFITAN--DVKQGKPHPEPYLKGRNGLG 184 (275)
T ss_dssp HCTTCEECTTHHHHHHHHHTSCGGGEEEECSSCHHHHH-HHHHHHTCC-CCSSEECGG--GCSSCTTSSHHHHHHHHHTT
T ss_pred HhcCCCcCcCHHHHHHHHHhccCCeEEEEeCCCHHHHH-HHHHHcCCC-ccCEEEEcc--cCCCCCCChHHHHHHHHHcC
Confidence 445678899999999999999 9999999997665544 456666775 488888888 77889999999999999999
Q ss_pred CCCC-------CCCcEEEEecCHHHHHHHHHcCCeEEEEcCCCCCcc-cccchhhhhhhhcccCCCC
Q 026543 168 GGPI-------DSQEILVFEDAPSGVLAAKNAGMSVVMVPDPRLDSS-YHSNADQLLSSLLGFNPKD 226 (237)
Q Consensus 168 ~~~~-------~~~~~~~igD~~~Di~~a~~~G~~~i~v~~~~~~~~-~~~~~~~~~~~~~el~~~l 226 (237)
+ +|++|++|||+.||+++|+.+|+.+++|.++..... ....++++++++.|+....
T Consensus 185 ---i~~~~~~~~~~~~i~~GDs~nDi~~a~~AG~~~i~v~~~~~~~~~~~~~ad~v~~~~~el~~~~ 248 (275)
T 2qlt_A 185 ---FPINEQDPSKSKVVVFEDAPAGIAAGKAAGCKIVGIATTFDLDFLKEKGCDIIVKNHESIRVGE 248 (275)
T ss_dssp ---CCCCSSCGGGSCEEEEESSHHHHHHHHHTTCEEEEESSSSCHHHHTTSSCSEEESSGGGEEECC
T ss_pred ---CCccccCCCcceEEEEeCCHHHHHHHHHcCCEEEEECCCCCHHHHhhCCCCEEECChHHcChhh
Confidence 9 999999999999999999999999999998766332 3446899999999986543
|
| >3smv_A S-(-)-azetidine-2-carboxylate hydrolase; haloacid dehalogenase superfamily, L-azetidine-2- carboxylate; HET: GOL; 1.38A {Pseudomonas} | Back alignment and structure |
|---|
Probab=99.97 E-value=9.7e-30 Score=192.75 Aligned_cols=203 Identities=18% Similarity=0.217 Sum_probs=157.6
Q ss_pred CCccEEEEecCcccccchhhHHHHHHHHHHHcCCCCCHHHHHHhcC------------CCh----HHHHHHHHHHhCCCC
Q 026543 8 KPITHVIFDMDGLLLDTEKFYTEVQELILARYNKTFDWSLKAKMMG------------KKA----IEAAQVFVEETGISD 71 (237)
Q Consensus 8 ~~~~~vifD~DGTL~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~------------~~~----~~~~~~~~~~~~~~~ 71 (237)
+++|+|+||+||||+++...+...+.++++++|.....+.+....+ ... ...+..+...++..
T Consensus 4 ~~~k~i~fD~DGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 82 (240)
T 3smv_A 4 TDFKALTFDCYGTLIDWETGIVNALQPLAKRTGKTFTSDELLEVFGRNESPQQTETPGALYQDILRAVYDRIAKEWGLE- 82 (240)
T ss_dssp GGCSEEEECCBTTTBCHHHHHHHHTHHHHHHHTCCCCHHHHHHHHHHHHGGGCCSSCCSCHHHHHHHHHHHHHHHTTCC-
T ss_pred ccceEEEEeCCCcCcCCchhHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhhCCCCChhHHHHHHHHHHHHHhCCC-
Confidence 4589999999999999999999999999999999877665543221 111 23344555666665
Q ss_pred CCCHHHHHHHHHHHHHhhcCCCCCCccHHHHHHHHHhCCCCEEEEeCChhhHHHHHHhhhhhhhhhcceeeeCCCCCccC
Q 026543 72 KLSAEDFLVQREETLQTLFPTSELMPGASHLIRHLHAKGIPMCVATGSLARHFELKTQKHRELFSLMHHVVRGDDPEVKQ 151 (237)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~v~i~s~~~~~~~~~~~~~~~gl~~~f~~~~~~~~~~~~~ 151 (237)
...+.. ..+........++|++.++++.|++ |++++++||+....... .++. +..+|+.+++++ +.+.
T Consensus 83 -~~~~~~-----~~~~~~~~~~~~~~~~~~~l~~l~~-~~~~~i~tn~~~~~~~~-~l~~--l~~~fd~i~~~~--~~~~ 150 (240)
T 3smv_A 83 -PDAAER-----EEFGTSVKNWPAFPDTVEALQYLKK-HYKLVILSNIDRNEFKL-SNAK--LGVEFDHIITAQ--DVGS 150 (240)
T ss_dssp -CCHHHH-----HHHHTGGGGCCBCTTHHHHHHHHHH-HSEEEEEESSCHHHHHH-HHTT--TCSCCSEEEEHH--HHTS
T ss_pred -CCHHHH-----HHHHHHHhcCCCCCcHHHHHHHHHh-CCeEEEEeCCChhHHHH-HHHh--cCCccCEEEEcc--ccCC
Confidence 443322 2223334557899999999999999 79999999977765553 3444 667899999998 8899
Q ss_pred CCCCHHHHHHH---HHHcCCCCCCCCcEEEEecCH-HHHHHHHHcCCeEEEEcCC-------CC-Ccccccchhhhhhhh
Q 026543 152 GKPSPDIFLAA---AKRFEGGPIDSQEILVFEDAP-SGVLAAKNAGMSVVMVPDP-------RL-DSSYHSNADQLLSSL 219 (237)
Q Consensus 152 ~kp~~~~~~~~---l~~~~~~~~~~~~~~~igD~~-~Di~~a~~~G~~~i~v~~~-------~~-~~~~~~~~~~~~~~~ 219 (237)
.||++..|..+ ++++| ++|++|++|||+. +|+++|+.+|+.++++..+ .. .......++++++++
T Consensus 151 ~KP~~~~~~~~l~~~~~lg---i~~~~~~~vGD~~~~Di~~a~~aG~~~~~~~~~~~~~g~g~~~~~~~~~~ad~v~~~~ 227 (240)
T 3smv_A 151 YKPNPNNFTYMIDALAKAG---IEKKDILHTAESLYHDHIPANDAGLVSAWIYRRHGKEGYGATHVPSRMPNVDFRFNSM 227 (240)
T ss_dssp CTTSHHHHHHHHHHHHHTT---CCGGGEEEEESCTTTTHHHHHHHTCEEEEECTTCC-------CCCSSCCCCSEEESSH
T ss_pred CCCCHHHHHHHHHHHHhcC---CCchhEEEECCCchhhhHHHHHcCCeEEEEcCCCcccCCCCCCCCcCCCCCCEEeCCH
Confidence 99999999999 89999 9999999999997 9999999999999999865 11 233457899999999
Q ss_pred cccCCCC
Q 026543 220 LGFNPKD 226 (237)
Q Consensus 220 ~el~~~l 226 (237)
.|+...+
T Consensus 228 ~el~~~l 234 (240)
T 3smv_A 228 GEMAEAH 234 (240)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9986544
|
| >3m9l_A Hydrolase, haloacid dehalogenase-like family; HAD family hydrolase, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Pseudomonas fluorescens} PDB: 2ybd_A* 3r09_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=2.7e-30 Score=191.89 Aligned_cols=192 Identities=20% Similarity=0.192 Sum_probs=146.5
Q ss_pred CCCccEEEEecCcccccchhhHHHHHHHHHHHcCCCCCHHHHHHhcCCChHHHHHHHHHHhCCCCCCCHHHHHHHHHHHH
Q 026543 7 KKPITHVIFDMDGLLLDTEKFYTEVQELILARYNKTFDWSLKAKMMGKKAIEAAQVFVEETGISDKLSAEDFLVQREETL 86 (237)
Q Consensus 7 ~~~~~~vifD~DGTL~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (237)
|+++|+|+||+||||+++...+. .+++++|.....+....+.+.+.. ...........+.
T Consensus 3 ~~~~k~iifDlDGTL~d~~~~~~----~~~~~~g~~~~~~~~~~~~~~~~~----------------~~~~~~~~~~~~~ 62 (205)
T 3m9l_A 3 LSEIKHWVFDMDGTLTIAVHDFA----AIREALSIPAEDDILTHLAALPAD----------------ESAAKHAWLLEHE 62 (205)
T ss_dssp GGGCCEEEECTBTTTEEEEECHH----HHHHHTTCCTTSCHHHHHHHSCHH----------------HHHHHHHHHHHTH
T ss_pred cccCCEEEEeCCCcCcccHHHHH----HHHHHhCCCchHHHHHHHhcCChH----------------HHHHHHHHHHHHH
Confidence 45689999999999999876543 566778876553332222111110 0112222333333
Q ss_pred HhhcCCCCCCccHHHHHHHHHhCCCCEEEEeCChhhHHHHHHhhhhhhhhhc--ceeeeCCCCCccCCCCCHHHHHHHHH
Q 026543 87 QTLFPTSELMPGASHLIRHLHAKGIPMCVATGSLARHFELKTQKHRELFSLM--HHVVRGDDPEVKQGKPSPDIFLAAAK 164 (237)
Q Consensus 87 ~~~~~~~~~~~~~~~~l~~l~~~g~~v~i~s~~~~~~~~~~~~~~~gl~~~f--~~~~~~~~~~~~~~kp~~~~~~~~l~ 164 (237)
........++|++.++++.|+++|++++++||+...... ..++.+|+..+| +.+++.+ . ..+||++..+..+++
T Consensus 63 ~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~-~~l~~~~l~~~f~~~~i~~~~--~-~~~kp~~~~~~~~~~ 138 (205)
T 3m9l_A 63 RDLAQGSRPAPGAVELVRELAGRGYRLGILTRNARELAH-VTLEAIGLADCFAEADVLGRD--E-APPKPHPGGLLKLAE 138 (205)
T ss_dssp HHHEEEEEECTTHHHHHHHHHHTTCEEEEECSSCHHHHH-HHHHHTTCGGGSCGGGEECTT--T-SCCTTSSHHHHHHHH
T ss_pred HHHhhcCCCCccHHHHHHHHHhcCCeEEEEeCCchHHHH-HHHHHcCchhhcCcceEEeCC--C-CCCCCCHHHHHHHHH
Confidence 444556789999999999999999999999997665544 567888999999 7888776 4 789999999999999
Q ss_pred HcCCCCCCCCcEEEEecCHHHHHHHHHcCCeEEEEcCCCCCcccccchhhhhhhhcccCCCCC
Q 026543 165 RFEGGPIDSQEILVFEDAPSGVLAAKNAGMSVVMVPDPRLDSSYHSNADQLLSSLLGFNPKDW 227 (237)
Q Consensus 165 ~~~~~~~~~~~~~~igD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~~~~el~~~l~ 227 (237)
++| ++|++|++|||+.+|+++|+.+|+.+|++.++.. ..+..++++++++.||...+.
T Consensus 139 ~~g---~~~~~~i~iGD~~~Di~~a~~aG~~~i~v~~~~~--~~~~~ad~v~~~~~el~~~~~ 196 (205)
T 3m9l_A 139 AWD---VSPSRMVMVGDYRFDLDCGRAAGTRTVLVNLPDN--PWPELTDWHARDCAQLRDLLS 196 (205)
T ss_dssp HTT---CCGGGEEEEESSHHHHHHHHHHTCEEEECSSSSC--SCGGGCSEECSSHHHHHHHHH
T ss_pred HcC---CCHHHEEEECCCHHHHHHHHHcCCEEEEEeCCCC--cccccCCEEeCCHHHHHHHHH
Confidence 999 9999999999999999999999999999987654 345679999999999866543
|
| >1zrn_A L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseudomonas SP} SCOP: c.108.1.1 PDB: 1zrm_A 1jud_A 1qh9_A | Back alignment and structure |
|---|
Probab=99.97 E-value=3.3e-29 Score=189.39 Aligned_cols=207 Identities=15% Similarity=0.208 Sum_probs=145.9
Q ss_pred CCccEEEEecCcccccchhhHHHHHHHHHHHcCCCCC---------HHHHHHhcCC--C----hHHHHHHHHHHhCCCCC
Q 026543 8 KPITHVIFDMDGLLLDTEKFYTEVQELILARYNKTFD---------WSLKAKMMGK--K----AIEAAQVFVEETGISDK 72 (237)
Q Consensus 8 ~~~~~vifD~DGTL~~~~~~~~~~~~~~~~~~g~~~~---------~~~~~~~~~~--~----~~~~~~~~~~~~~~~~~ 72 (237)
+++|+|+||+||||+++...+..++..+ ...+.... ........+. + ....+..+...++..
T Consensus 2 ~m~k~viFDlDGTL~d~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 78 (232)
T 1zrn_A 2 DYIKGIAFDLYGTLFDVHSVVGRCDEAF-PGRGREISALWRQKQLEYTWLRSLMNRYVNFQQATEDALRFTCRHLGLD-- 78 (232)
T ss_dssp -CCCEEEECSBTTTEETHHHHHHHHHHS-TTTHHHHHHHHHHHHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHTCC--
T ss_pred CCceEEEEecCCcccCchhhHHHHHHHc-cccHHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHcCCC--
Confidence 3579999999999999887655444311 00000000 0000001111 1 112233444555554
Q ss_pred CCHHHHHHHHHHHHHhhcCCCCCCccHHHHHHHHHhCCCCEEEEeCChhhHHHHHHhhhhhhhhhcceeeeCCCCCccCC
Q 026543 73 LSAEDFLVQREETLQTLFPTSELMPGASHLIRHLHAKGIPMCVATGSLARHFELKTQKHRELFSLMHHVVRGDDPEVKQG 152 (237)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~v~i~s~~~~~~~~~~~~~~~gl~~~f~~~~~~~~~~~~~~ 152 (237)
...+.... .. .......++|++.++++.|+++|++++++||+...... ..++.+|+..+|+.+++++ ..+..
T Consensus 79 ~~~~~~~~----~~-~~~~~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~-~~l~~~~l~~~f~~~~~~~--~~~~~ 150 (232)
T 1zrn_A 79 LDARTRST----LC-DAYLRLAPFSEVPDSLRELKRRGLKLAILSNGSPQSID-AVVSHAGLRDGFDHLLSVD--PVQVY 150 (232)
T ss_dssp CCHHHHHH----HH-HGGGGCEECTTHHHHHHHHHHTTCEEEEEESSCHHHHH-HHHHHTTCGGGCSEEEESG--GGTCC
T ss_pred CCHHHHHH----HH-HHHccCCCCccHHHHHHHHHHCCCEEEEEeCCCHHHHH-HHHHhcChHhhhheEEEec--ccCCC
Confidence 33332222 22 22234778999999999999999999999997665444 5677889999999999998 88889
Q ss_pred CCCHHHHHHHHHHcCCCCCCCCcEEEEecCHHHHHHHHHcCCeEEEEcCCCCC-cccccchhhhhhhhcccCCCCCC
Q 026543 153 KPSPDIFLAAAKRFEGGPIDSQEILVFEDAPSGVLAAKNAGMSVVMVPDPRLD-SSYHSNADQLLSSLLGFNPKDWG 228 (237)
Q Consensus 153 kp~~~~~~~~l~~~~~~~~~~~~~~~igD~~~Di~~a~~~G~~~i~v~~~~~~-~~~~~~~~~~~~~~~el~~~l~~ 228 (237)
||++..+..+++++| ++|++|++|||+.+|+++|+.+|+.++++..+... +.....++++++++.|+...+..
T Consensus 151 Kp~~~~~~~~~~~~~---~~~~~~~~iGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~~~l~~ 224 (232)
T 1zrn_A 151 KPDNRVYELAEQALG---LDRSAILFVASNAWDATGARYFGFPTCWINRTGNVFEEMGQTPDWEVTSLRAVVELFET 224 (232)
T ss_dssp TTSHHHHHHHHHHHT---SCGGGEEEEESCHHHHHHHHHHTCCEEEECTTCCCCCSSSCCCSEEESSHHHHHTTC--
T ss_pred CCCHHHHHHHHHHcC---CCcccEEEEeCCHHHHHHHHHcCCEEEEEcCCCCCccccCCCCCEEECCHHHHHHHHHh
Confidence 999999999999999 99999999999999999999999999999886543 23356789999999999776644
|
| >3umg_A Haloacid dehalogenase; defluorinase, hydrolase; 2.25A {Rhodococcus jostii} | Back alignment and structure |
|---|
Probab=99.96 E-value=2.1e-29 Score=192.59 Aligned_cols=206 Identities=14% Similarity=0.150 Sum_probs=154.9
Q ss_pred CCccEEEEecCcccccchhhHHHHHHHHHHHcCCCCCHHHHH-HhcCCC--------------------hHHHHHHHHHH
Q 026543 8 KPITHVIFDMDGLLLDTEKFYTEVQELILARYNKTFDWSLKA-KMMGKK--------------------AIEAAQVFVEE 66 (237)
Q Consensus 8 ~~~~~vifD~DGTL~~~~~~~~~~~~~~~~~~g~~~~~~~~~-~~~~~~--------------------~~~~~~~~~~~ 66 (237)
+++|+|+||+||||+++...+...+.++++++|......... .+.+.. ....+..+.+.
T Consensus 13 ~~~k~i~fDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 92 (254)
T 3umg_A 13 RNVRAVLFDTFGTVVDWRTGIATAVADYAARHQLEVDAVAFADRWRARYQPSMDAILSGAREFVTLDILHRENLDFVLRE 92 (254)
T ss_dssp SBCCEEEECCBTTTBCHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHTTHHHHHHHHHTTSSCCCCHHHHHHHHHHHHHHH
T ss_pred CCceEEEEeCCCceecCchHHHHHHHHHHHHhcCCCCHHHHHHHHHHhHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHH
Confidence 458999999999999999999999999999999877654432 222211 12223344444
Q ss_pred hCCCC-CCCHHHHHHHHHHHHHhhcCCCCCCccHHHHHHHHHhCCCCEEEEeCChhhHHHHHHhhhhhhhhhcceeeeCC
Q 026543 67 TGISD-KLSAEDFLVQREETLQTLFPTSELMPGASHLIRHLHAKGIPMCVATGSLARHFELKTQKHRELFSLMHHVVRGD 145 (237)
Q Consensus 67 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~v~i~s~~~~~~~~~~~~~~~gl~~~f~~~~~~~ 145 (237)
++... ......... +........++|++.++++.|+++ ++++++||+...... ..++.+|+. |+.+++++
T Consensus 93 ~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~l~~l~~~-~~~~i~t~~~~~~~~-~~l~~~~~~--f~~~~~~~ 163 (254)
T 3umg_A 93 SGIDPTNHDSGELDE-----LARAWHVLTPWPDSVPGLTAIKAE-YIIGPLSNGNTSLLL-DMAKNAGIP--WDVIIGSD 163 (254)
T ss_dssp TTCCGGGSCHHHHHH-----HHGGGGSCCBCTTHHHHHHHHHHH-SEEEECSSSCHHHHH-HHHHHHTCC--CSCCCCHH
T ss_pred hCCCcCcCCHHHHHH-----HHHHHhhCcCCcCHHHHHHHHHhC-CeEEEEeCCCHHHHH-HHHHhCCCC--eeEEEEcC
Confidence 44410 023222221 122334578899999999999997 999999997765544 457777775 89999888
Q ss_pred CCCccCCCCCHHHHHHHHHHcCCCCCCCCcEEEEecCHHHHHHHHHcCCeEEEEcC----CCCC-cc--cccchhhhhhh
Q 026543 146 DPEVKQGKPSPDIFLAAAKRFEGGPIDSQEILVFEDAPSGVLAAKNAGMSVVMVPD----PRLD-SS--YHSNADQLLSS 218 (237)
Q Consensus 146 ~~~~~~~kp~~~~~~~~l~~~~~~~~~~~~~~~igD~~~Di~~a~~~G~~~i~v~~----~~~~-~~--~~~~~~~~~~~ 218 (237)
..+..||++..|..+++++| ++|++|++|||+.+|+++|+.+|+.++++.. +... +. ....+++++++
T Consensus 164 --~~~~~kp~~~~~~~~~~~lg---i~~~~~~~iGD~~~Di~~a~~aG~~~~~~~~~~~~g~~~~~~~~~~~~~d~~~~~ 238 (254)
T 3umg_A 164 --INRKYKPDPQAYLRTAQVLG---LHPGEVMLAAAHNGDLEAAHATGLATAFILRPVEHGPHQTDDLAPTGSWDISATD 238 (254)
T ss_dssp --HHTCCTTSHHHHHHHHHHTT---CCGGGEEEEESCHHHHHHHHHTTCEEEEECCTTTTCTTCCSCSSCSSCCSEEESS
T ss_pred --cCCCCCCCHHHHHHHHHHcC---CChHHEEEEeCChHhHHHHHHCCCEEEEEecCCcCCCCccccccccCCCceEECC
Confidence 78899999999999999999 9999999999999999999999999999984 3321 11 35789999999
Q ss_pred hcccCCCCC
Q 026543 219 LLGFNPKDW 227 (237)
Q Consensus 219 ~~el~~~l~ 227 (237)
+.||...+.
T Consensus 239 ~~el~~~l~ 247 (254)
T 3umg_A 239 ITDLAAQLR 247 (254)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHhc
Confidence 999976553
|
| >2no4_A (S)-2-haloacid dehalogenase IVA; HAD superfamily, rossman fold, hydrol; 1.93A {Burkholderia cepacia} PDB: 2no5_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=1.4e-28 Score=187.00 Aligned_cols=206 Identities=16% Similarity=0.208 Sum_probs=144.8
Q ss_pred CCccEEEEecCcccccchhhHHHHHHHHHHHcCCCC---------CHHHHHHhcCC--C----hHHHHHHHHHHhCCCCC
Q 026543 8 KPITHVIFDMDGLLLDTEKFYTEVQELILARYNKTF---------DWSLKAKMMGK--K----AIEAAQVFVEETGISDK 72 (237)
Q Consensus 8 ~~~~~vifD~DGTL~~~~~~~~~~~~~~~~~~g~~~---------~~~~~~~~~~~--~----~~~~~~~~~~~~~~~~~ 72 (237)
|++|+|+||+||||+++...+..++..+ ...+... .........+. . .......+...++..
T Consensus 12 M~~k~viFDlDGTL~d~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 88 (240)
T 2no4_A 12 DSLRACVFDAYGTLLDVHSAVMRNADEV-GASAEALSMLWRQRQLEYSWTRTLMHQYADFWQLTDEALTFALRTYHLE-- 88 (240)
T ss_dssp SCCCEEEECCBTTTBCTTHHHHTTHHHH-CTTHHHHHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHTTCT--
T ss_pred ccccEEEEeCCCcccccHhHHHHHHHHh-cchhHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHhCCC--
Confidence 3579999999999999987655433311 0000000 00001111111 1 112223344444443
Q ss_pred CCHHHHHHHHHHHHHhhcCCCCCCccHHHHHHHHHhCCCCEEEEeCChhhHHHHHHhhhhhhhhhcceeeeCCCCCccCC
Q 026543 73 LSAEDFLVQREETLQTLFPTSELMPGASHLIRHLHAKGIPMCVATGSLARHFELKTQKHRELFSLMHHVVRGDDPEVKQG 152 (237)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~v~i~s~~~~~~~~~~~~~~~gl~~~f~~~~~~~~~~~~~~ 152 (237)
...+....... . .....++||+.++++.|+++|++++++||+...... ..++.+|+..+|+.+++++ ..+..
T Consensus 89 ~~~~~~~~~~~-~----~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~-~~l~~~~l~~~f~~~~~~~--~~~~~ 160 (240)
T 2no4_A 89 DRKGLKDRLMS-A----YKELSAYPDAAETLEKLKSAGYIVAILSNGNDEMLQ-AALKASKLDRVLDSCLSAD--DLKIY 160 (240)
T ss_dssp THHHHHHHHHH-H----HHTCCBCTTHHHHHHHHHHTTCEEEEEESSCHHHHH-HHHHHTTCGGGCSEEEEGG--GTTCC
T ss_pred CCHHHHHHHHH-H----HhcCCCCCCHHHHHHHHHHCCCEEEEEcCCCHHHHH-HHHHhcCcHHHcCEEEEcc--ccCCC
Confidence 22222222111 1 224789999999999999999999999997665444 5677889999999999998 88889
Q ss_pred CCCHHHHHHHHHHcCCCCCCCCcEEEEecCHHHHHHHHHcCCeEEEEcCCCCCcccccch-hhhhhhhcccCCCCC
Q 026543 153 KPSPDIFLAAAKRFEGGPIDSQEILVFEDAPSGVLAAKNAGMSVVMVPDPRLDSSYHSNA-DQLLSSLLGFNPKDW 227 (237)
Q Consensus 153 kp~~~~~~~~l~~~~~~~~~~~~~~~igD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~-~~~~~~~~el~~~l~ 227 (237)
||++..+..+++++| ++|++|++|||+.+|+++|+.+|+.+++|.++...+.....+ +++++++.|+...+.
T Consensus 161 Kp~~~~~~~~~~~~~---~~~~~~~~iGD~~~Di~~a~~aG~~~~~v~~~~~~~~~~~~~~~~~~~~~~el~~~l~ 233 (240)
T 2no4_A 161 KPDPRIYQFACDRLG---VNPNEVCFVSSNAWDLGGAGKFGFNTVRINRQGNPPEYEFAPLKHQVNSLSELWPLLA 233 (240)
T ss_dssp TTSHHHHHHHHHHHT---CCGGGEEEEESCHHHHHHHHHHTCEEEEECTTCCCCCCTTSCCSEEESSGGGHHHHHC
T ss_pred CCCHHHHHHHHHHcC---CCcccEEEEeCCHHHHHHHHHCCCEEEEECCCCCCCcccCCCCceeeCCHHHHHHHHH
Confidence 999999999999999 999999999999999999999999999999876633334567 899999999866553
|
| >2pke_A Haloacid delahogenase-like family hydrolase; NP_639141.1, ST genomics, joint center for structural genomics, JCSG; 1.81A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=99.96 E-value=1.6e-28 Score=187.85 Aligned_cols=204 Identities=16% Similarity=0.152 Sum_probs=150.2
Q ss_pred CccEEEEecCcccccchhhHHHHHHHHH---HHcCCCC---CHH-----HHH--HhcCCChHHHHHHHHH----HhCCCC
Q 026543 9 PITHVIFDMDGLLLDTEKFYTEVQELIL---ARYNKTF---DWS-----LKA--KMMGKKAIEAAQVFVE----ETGISD 71 (237)
Q Consensus 9 ~~~~vifD~DGTL~~~~~~~~~~~~~~~---~~~g~~~---~~~-----~~~--~~~~~~~~~~~~~~~~----~~~~~~ 71 (237)
++|+|+||+||||+++...+...+..++ .++|... ... ... ...|.+.....+.+.. ..+..
T Consensus 12 ~~k~iifDlDGTL~d~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~- 90 (251)
T 2pke_A 12 AIQLVGFDGDDTLWKSEDYYRTAEADFEAILSGYLDLGDSRMQQHLLAVERRNLKIFGYGAKGMTLSMIETAIELTEAR- 90 (251)
T ss_dssp SCCEEEECCBTTTBCCHHHHHHHHHHHHHHHTTTCCC-----CTTHHHHHHHHHHHHCSSHHHHHHHHHHHHHHHTTTC-
T ss_pred ceeEEEEeCCCCCccCcHhHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHhhhhhhccCcchHHHHHHHHHHHHhcCCC-
Confidence 4799999999999999998888888777 4567654 111 111 2457766655554432 33433
Q ss_pred CCCHHHHHHHHHHHHHhhcCCCCCCccHHHHHHHHHhCCCCEEEEeCChhhHHHHHHhhhhhhhhhcceeeeCCCCCccC
Q 026543 72 KLSAEDFLVQREETLQTLFPTSELMPGASHLIRHLHAKGIPMCVATGSLARHFELKTQKHRELFSLMHHVVRGDDPEVKQ 151 (237)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~v~i~s~~~~~~~~~~~~~~~gl~~~f~~~~~~~~~~~~~ 151 (237)
............+.+.......++|++.++++.|+ +|++++++||+...... ..++..|+..+|+.+++..
T Consensus 91 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~-~~~~~~i~t~~~~~~~~-~~l~~~~l~~~f~~i~~~~------ 161 (251)
T 2pke_A 91 -IEARDIQRIVEIGRATLQHPVEVIAGVREAVAAIA-ADYAVVLITKGDLFHQE-QKIEQSGLSDLFPRIEVVS------ 161 (251)
T ss_dssp -CCHHHHHHHHHHHHHHHTCCCCBCTTHHHHHHHHH-TTSEEEEEEESCHHHHH-HHHHHHSGGGTCCCEEEES------
T ss_pred -CChHHHHHHHHHHHHHHhccCCcCccHHHHHHHHH-CCCEEEEEeCCCHHHHH-HHHHHcCcHHhCceeeeeC------
Confidence 34444444444444444556789999999999999 88999999997665444 4577788999999887643
Q ss_pred CCCCHHHHHHHHHHcCCCCCCCCcEEEEecCH-HHHHHHHHcCCeEEEEcCCCCCc------ccccchhh-hhhhhcccC
Q 026543 152 GKPSPDIFLAAAKRFEGGPIDSQEILVFEDAP-SGVLAAKNAGMSVVMVPDPRLDS------SYHSNADQ-LLSSLLGFN 223 (237)
Q Consensus 152 ~kp~~~~~~~~l~~~~~~~~~~~~~~~igD~~-~Di~~a~~~G~~~i~v~~~~~~~------~~~~~~~~-~~~~~~el~ 223 (237)
||++..+..+++++| ++|++|++|||+. +|+++|+.+|+.+++|.++.... .....+++ +++++.|+.
T Consensus 162 -kp~~~~~~~~~~~l~---~~~~~~i~iGD~~~~Di~~a~~aG~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~~~~el~ 237 (251)
T 2pke_A 162 -EKDPQTYARVLSEFD---LPAERFVMIGNSLRSDVEPVLAIGGWGIYTPYAVTWAHEQDHGVAADEPRLREVPDPSGWP 237 (251)
T ss_dssp -CCSHHHHHHHHHHHT---CCGGGEEEEESCCCCCCHHHHHTTCEEEECCCC-------------CCTTEEECSSGGGHH
T ss_pred -CCCHHHHHHHHHHhC---cCchhEEEECCCchhhHHHHHHCCCEEEEECCCCccccccccccccCCCCeeeeCCHHHHH
Confidence 899999999999999 9999999999999 99999999999999998765421 22456887 899999986
Q ss_pred CCC
Q 026543 224 PKD 226 (237)
Q Consensus 224 ~~l 226 (237)
..+
T Consensus 238 ~~l 240 (251)
T 2pke_A 238 AAV 240 (251)
T ss_dssp HHH
T ss_pred HHH
Confidence 543
|
| >3u26_A PF00702 domain protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, unknown function; 1.59A {Pyrococcus horikoshii} SCOP: c.108.1.1 PDB: 1x42_A | Back alignment and structure |
|---|
Probab=99.96 E-value=2e-29 Score=190.55 Aligned_cols=204 Identities=21% Similarity=0.242 Sum_probs=150.0
Q ss_pred ccEEEEecCcccccchhhHHH---HHHHHHHHcCCCCC----------HHHHHHhcCCChH-------HHHHHHHHHhCC
Q 026543 10 ITHVIFDMDGLLLDTEKFYTE---VQELILARYNKTFD----------WSLKAKMMGKKAI-------EAAQVFVEETGI 69 (237)
Q Consensus 10 ~~~vifD~DGTL~~~~~~~~~---~~~~~~~~~g~~~~----------~~~~~~~~~~~~~-------~~~~~~~~~~~~ 69 (237)
+|+|+||+||||+++...+.. .+.+.+.+.|+... ...+....+.+.. ..++.+...++.
T Consensus 2 ik~i~fDlDGTL~d~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 81 (234)
T 3u26_A 2 IRAVFFDSLGTLNSVEGAAKSHLKIMEEVLGDYPLNPKTLLDEYEKLTREAFSNYAGKPYRPLRDILEEVMRKLAEKYGF 81 (234)
T ss_dssp CCEEEECSTTTTBCHHHHHHHHHHHHHHHCSSSSSCHHHHHHHHHHHHHHHHHHHTTSBCCCHHHHHHHHHHHHHHHHTC
T ss_pred CcEEEEcCCCccccccchhHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHhcccCCCcHHHHHHHHHHHHHHHcCc
Confidence 799999999999999864433 34444444455321 1112223333221 234455555554
Q ss_pred CCCCCHHHHHHHHHHHHHhhcCCCCCCccHHHHHHHHHhCCCCEEEEeCChhhHHHHHHhhhhhhhhhcceeeeCCCCCc
Q 026543 70 SDKLSAEDFLVQREETLQTLFPTSELMPGASHLIRHLHAKGIPMCVATGSLARHFELKTQKHRELFSLMHHVVRGDDPEV 149 (237)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~v~i~s~~~~~~~~~~~~~~~gl~~~f~~~~~~~~~~~ 149 (237)
. ...... ............++|++.++++.|+++ ++++++||+...... ..++.+|+..+|+.+++++ ..
T Consensus 82 ~--~~~~~~----~~~~~~~~~~~~~~~~~~~~l~~l~~~-~~~~i~t~~~~~~~~-~~l~~~~~~~~f~~~~~~~--~~ 151 (234)
T 3u26_A 82 K--YPENFW----EISLRMSQRYGELYPEVVEVLKSLKGK-YHVGMITDSDTEQAM-AFLDALGIKDLFDSITTSE--EA 151 (234)
T ss_dssp C--CCTTHH----HHHHHHHHHHCCBCTTHHHHHHHHTTT-SEEEEEESSCHHHHH-HHHHHTTCGGGCSEEEEHH--HH
T ss_pred h--HHHHHH----HHHHHHHHhhCCcCcCHHHHHHHHHhC-CcEEEEECCCHHHHH-HHHHHcCcHHHcceeEecc--cc
Confidence 3 221111 111112222467899999999999999 999999997765544 5677889999999999998 78
Q ss_pred cCCCCCHHHHHHHHHHcCCCCCCCCcEEEEecCH-HHHHHHHHcCCeEEEEcCCCCCcccccchhhhhhhhcccCCCC
Q 026543 150 KQGKPSPDIFLAAAKRFEGGPIDSQEILVFEDAP-SGVLAAKNAGMSVVMVPDPRLDSSYHSNADQLLSSLLGFNPKD 226 (237)
Q Consensus 150 ~~~kp~~~~~~~~l~~~~~~~~~~~~~~~igD~~-~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~~~~el~~~l 226 (237)
+..||++..+..+++++| ++|++|++|||+. ||+++|+.+|+.+++|.+++........++++++++.|+...+
T Consensus 152 ~~~kp~~~~~~~~~~~~~---~~~~~~~~vGD~~~~Di~~a~~aG~~~~~v~~~~~~~~~~~~a~~~~~~~~el~~~l 226 (234)
T 3u26_A 152 GFFKPHPRIFELALKKAG---VKGEEAVYVGDNPVKDCGGSKNLGMTSILLDRKGEKREFWDKCDFIVSDLREVIKIV 226 (234)
T ss_dssp TBCTTSHHHHHHHHHHHT---CCGGGEEEEESCTTTTHHHHHTTTCEEEEECSSSTTGGGGGGCSEEESSTHHHHHHH
T ss_pred CCCCcCHHHHHHHHHHcC---CCchhEEEEcCCcHHHHHHHHHcCCEEEEECCCCCccccccCCCEeeCCHHHHHHHH
Confidence 889999999999999999 9999999999998 9999999999999999998776555668999999999986554
|
| >3umc_A Haloacid dehalogenase; HY; 2.15A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=99.96 E-value=2.2e-29 Score=192.74 Aligned_cols=204 Identities=15% Similarity=0.195 Sum_probs=153.4
Q ss_pred CCCccEEEEecCcccccchhhHHHHHHHHHHHcCCCCCHHHHH-HhcCCC--------------------hHHHHHHHHH
Q 026543 7 KKPITHVIFDMDGLLLDTEKFYTEVQELILARYNKTFDWSLKA-KMMGKK--------------------AIEAAQVFVE 65 (237)
Q Consensus 7 ~~~~~~vifD~DGTL~~~~~~~~~~~~~~~~~~g~~~~~~~~~-~~~~~~--------------------~~~~~~~~~~ 65 (237)
.|++|+|+||+||||+++...+...+..+++++|......... .+.+.. ....+..+..
T Consensus 19 ~m~ik~i~fDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (254)
T 3umc_A 19 FQGMRAILFDVFGTLVDWRSSLIEQFQALERELGGTLPCVELTDRWRQQYKPAMDRVRNGQAPWQHLDQLHRQSLEALAG 98 (254)
T ss_dssp SSSCCEEEECCBTTTEEHHHHHHHHHHHHHHHSSSCCCHHHHHHHHHHHTHHHHHHHHTTSSCCCCHHHHHHHHHHHHHH
T ss_pred ccCCcEEEEeCCCccEecCccHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhcccCCcccHHHHHHHHHHHHHH
Confidence 3568999999999999999989999999999999876654432 111110 0112233344
Q ss_pred HhCCCCCCCHHHHHHHHHHHHHhhcCCCCCCccHHHHHHHHHhCCCCEEEEeCChhhHHHHHHhhhhhhhhhcceeeeCC
Q 026543 66 ETGISDKLSAEDFLVQREETLQTLFPTSELMPGASHLIRHLHAKGIPMCVATGSLARHFELKTQKHRELFSLMHHVVRGD 145 (237)
Q Consensus 66 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~v~i~s~~~~~~~~~~~~~~~gl~~~f~~~~~~~ 145 (237)
.++.. ....... .+........++|++.++++.|++. ++++++||+...... .+++.+|+. |+.+++++
T Consensus 99 ~~~~~--~~~~~~~-----~~~~~~~~~~~~~~~~~~l~~l~~~-~~~~i~s~~~~~~~~-~~l~~~g~~--f~~~~~~~ 167 (254)
T 3umc_A 99 EFGLA--LDEALLQ-----RITGFWHRLRPWPDTLAGMHALKAD-YWLAALSNGNTALML-DVARHAGLP--WDMLLCAD 167 (254)
T ss_dssp HTTCC--CCHHHHH-----HHHGGGGSCEECTTHHHHHHHHTTT-SEEEECCSSCHHHHH-HHHHHHTCC--CSEECCHH
T ss_pred HhCCC--CCHHHHH-----HHHHHHhcCCCCccHHHHHHHHHhc-CeEEEEeCCCHHHHH-HHHHHcCCC--cceEEeec
Confidence 44443 3332221 1222334577899999999999986 999999997665544 456777775 89999888
Q ss_pred CCCccCCCCCHHHHHHHHHHcCCCCCCCCcEEEEecCHHHHHHHHHcCCeEEEEc----CCCC-Ccc--cccchhhhhhh
Q 026543 146 DPEVKQGKPSPDIFLAAAKRFEGGPIDSQEILVFEDAPSGVLAAKNAGMSVVMVP----DPRL-DSS--YHSNADQLLSS 218 (237)
Q Consensus 146 ~~~~~~~kp~~~~~~~~l~~~~~~~~~~~~~~~igD~~~Di~~a~~~G~~~i~v~----~~~~-~~~--~~~~~~~~~~~ 218 (237)
..+..||++.+|..+++++| ++|++|++|||+.+|+++|+.+|+.++++. .+.. .+. ....|++++++
T Consensus 168 --~~~~~kp~~~~~~~~~~~lg---i~~~~~~~iGD~~~Di~~a~~aG~~~~~~~~~~~~g~~~~~~l~~~~~ad~v~~~ 242 (254)
T 3umc_A 168 --LFGHYKPDPQVYLGACRLLD---LPPQEVMLCAAHNYDLKAARALGLKTAFIARPLEYGPGQSQDLAAEQDWDLIASD 242 (254)
T ss_dssp --HHTCCTTSHHHHHHHHHHHT---CCGGGEEEEESCHHHHHHHHHTTCEEEEECCTTTTCTTCCSSSSCSSCCSEEESS
T ss_pred --ccccCCCCHHHHHHHHHHcC---CChHHEEEEcCchHhHHHHHHCCCeEEEEecCCccCCCCCcccccCCCCcEEECC
Confidence 88899999999999999999 999999999999999999999999999998 3332 222 26789999999
Q ss_pred hcccCCCC
Q 026543 219 LLGFNPKD 226 (237)
Q Consensus 219 ~~el~~~l 226 (237)
+.||...+
T Consensus 243 l~el~~~l 250 (254)
T 3umc_A 243 LLDLHRQL 250 (254)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHh
Confidence 99986544
|
| >2g80_A Protein UTR4; YEL038W, UTR4 protein (unknown transcript 4 protein), struct genomics, PSI, protein structure initiative; 2.28A {Saccharomyces cerevisiae} SCOP: c.108.1.22 | Back alignment and structure |
|---|
Probab=99.96 E-value=1.4e-28 Score=187.85 Aligned_cols=203 Identities=10% Similarity=0.084 Sum_probs=138.8
Q ss_pred CccEEEEecCcccccchhh-------HHHHHHHHHHHcCCCCCHH-HHHHhcCCChHHHHHHHHHHhCCCCCCC-HHHH-
Q 026543 9 PITHVIFDMDGLLLDTEKF-------YTEVQELILARYNKTFDWS-LKAKMMGKKAIEAAQVFVEETGISDKLS-AEDF- 78 (237)
Q Consensus 9 ~~~~vifD~DGTL~~~~~~-------~~~~~~~~~~~~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~- 78 (237)
++++|+||+||||+|+... +...+..++..++...... ....+.+.+..+..+.+...++...... .+.+
T Consensus 30 ~ikaviFDlDGTLvDs~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~~~~~~~~~~~~~~~ 109 (253)
T 2g80_A 30 NYSTYLLDIEGTVCPISFVKETLFPYFTNKVPQLVQQDTRDSPVSNILSQFHIDNKEQLQAHILELVAKDVKDPILKQLQ 109 (253)
T ss_dssp CCSEEEECCBTTTBCTHHHHHTHHHHHHHHHHHHHHSCCTTSHHHHHHHTTCCCCHHHHHHHHHHHHHTTCCCHHHHHHH
T ss_pred CCcEEEEcCCCCcccccccchhhHHHHHHHHHHHHHHhcCcHHHHHHHHHhhhccHHHHHHHHHHHHhcccchHHHHHHH
Confidence 4899999999999998743 3344455556666543222 2333445566666666666554331111 1121
Q ss_pred HHHHHHHHHhhcCCCCCCccHHHHHHHHHhCCCCEEEEeCChhhHHHHHHhhhh-----------hhhhhcceeeeCCCC
Q 026543 79 LVQREETLQTLFPTSELMPGASHLIRHLHAKGIPMCVATGSLARHFELKTQKHR-----------ELFSLMHHVVRGDDP 147 (237)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~v~i~s~~~~~~~~~~~~~~~-----------gl~~~f~~~~~~~~~ 147 (237)
...+...+........++||+.++|+. |++++|+||+...... ..++.. ++..+|+.++...
T Consensus 110 ~~~~~~~~~~~~~~~~~~pgv~e~L~~----g~~l~i~Tn~~~~~~~-~~l~~~~~g~~~~~~~l~l~~~~~~~f~~~-- 182 (253)
T 2g80_A 110 GYVWAHGYESGQIKAPVYADAIDFIKR----KKRVFIYSSGSVKAQK-LLFGYVQDPNAPAHDSLDLNSYIDGYFDIN-- 182 (253)
T ss_dssp HHHHHHHHHTTSCCBCCCHHHHHHHHH----CSCEEEECSSCHHHHH-HHHHSBCCTTCTTSCCBCCGGGCCEEECHH--
T ss_pred HHHHHHHHHhCcccCCCCCCHHHHHHc----CCEEEEEeCCCHHHHH-HHHHhhcccccccccccchHhhcceEEeee--
Confidence 223444444444457889999999988 8999999998776544 345543 4777777766442
Q ss_pred CccCCCCCHHHHHHHHHHcCCCCCCCCcEEEEecCHHHHHHHHHcCCeEEEEcCCCCCcccccchhhhhhhhccc
Q 026543 148 EVKQGKPSPDIFLAAAKRFEGGPIDSQEILVFEDAPSGVLAAKNAGMSVVMVPDPRLDSSYHSNADQLLSSLLGF 222 (237)
Q Consensus 148 ~~~~~kp~~~~~~~~l~~~~~~~~~~~~~~~igD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~~~~el 222 (237)
....||+|+.|..+++++| ++|++|+||||+.+|+++|+++|+.+++|.++.........++.++++|.||
T Consensus 183 -~~g~KP~p~~~~~a~~~lg---~~p~~~l~vgDs~~di~aA~~aG~~~i~v~~~~~~~~~~~~~~~~i~~l~eL 253 (253)
T 2g80_A 183 -TSGKKTETQSYANILRDIG---AKASEVLFLSDNPLELDAAAGVGIATGLASRPGNAPVPDGQKYQVYKNFETL 253 (253)
T ss_dssp -HHCCTTCHHHHHHHHHHHT---CCGGGEEEEESCHHHHHHHHTTTCEEEEECCTTSCCCCSSCCSCEESCSTTC
T ss_pred -ccCCCCCHHHHHHHHHHcC---CCcccEEEEcCCHHHHHHHHHcCCEEEEEcCCCCCCcccccCCCccCChhhC
Confidence 2125999999999999999 9999999999999999999999999999987443222122367788888774
|
| >3nuq_A Protein SSM1, putative nucleotide phosphatase; suppresses the 6-AU sensitivity of transcription elongation II; 1.70A {Saccharomyces cerevisiae} PDB: 3onn_A 3opx_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=1.4e-28 Score=191.45 Aligned_cols=213 Identities=13% Similarity=0.144 Sum_probs=149.6
Q ss_pred CCCccEEEEecCcccccchhhHHHHHHHHHHHc---CCCCCHHHHHHhcC---CChHHHHHHHHHHhCCCCCCCHHHHHH
Q 026543 7 KKPITHVIFDMDGLLLDTEKFYTEVQELILARY---NKTFDWSLKAKMMG---KKAIEAAQVFVEETGISDKLSAEDFLV 80 (237)
Q Consensus 7 ~~~~~~vifD~DGTL~~~~~~~~~~~~~~~~~~---g~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (237)
.+++|+|+||+||||+++...+...+...+.++ +............. .........+....++ ....+..
T Consensus 54 ~~~~k~i~FDlDGTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~----~~~~~~~ 129 (282)
T 3nuq_A 54 NPNLKVFFFDIDNCLYKSSTRIHDLMQQSILRFFQTHLKLSPEDAHVLNNSYYKEYGLAIRGLVMFHKV----NALEYNR 129 (282)
T ss_dssp -CCCCEEEECCTTTTSCCCHHHHHHHHHHHHHHHHHCTTSCHHHHHHHHHHHHHHTHHHHHHHHHTTSS----CHHHHHH
T ss_pred CCCCCEEEEecCCCcccCCccHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHcCC----CHHHHHH
Confidence 446799999999999999877777777666553 22233332221110 0011122334444443 3444333
Q ss_pred HHHHHHHhhcCCCCCCccHHHHHHHHHhCCC--CEEEEeCChhhHHHHHHhhhhhhhhhcceeeeCCCC--CccCCCCCH
Q 026543 81 QREETLQTLFPTSELMPGASHLIRHLHAKGI--PMCVATGSLARHFELKTQKHRELFSLMHHVVRGDDP--EVKQGKPSP 156 (237)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~--~v~i~s~~~~~~~~~~~~~~~gl~~~f~~~~~~~~~--~~~~~kp~~ 156 (237)
....... ......++||+.++++.|+++|+ +++++||+...... ..++.+|+..+|+.+++++.. ....+||++
T Consensus 130 ~~~~~~~-~~~~~~~~p~~~~~L~~L~~~g~~~~l~i~Tn~~~~~~~-~~l~~~gl~~~fd~v~~~~~~~~~~~~~Kp~~ 207 (282)
T 3nuq_A 130 LVDDSLP-LQDILKPDIPLRNMLLRLRQSGKIDKLWLFTNAYKNHAI-RCLRLLGIADLFDGLTYCDYSRTDTLVCKPHV 207 (282)
T ss_dssp HHTTTSC-GGGTCCCCHHHHHHHHHHHHSSSCSEEEEECSSCHHHHH-HHHHHHTCTTSCSEEECCCCSSCSSCCCTTSH
T ss_pred HHhhhhh-hhhccCcChhHHHHHHHHHhCCCCceEEEEECCChHHHH-HHHHhCCcccccceEEEeccCCCcccCCCcCH
Confidence 3222111 12347789999999999999999 99999997766554 567788999999999987611 225679999
Q ss_pred HHHHHHHHHcCCCCCCC-CcEEEEecCHHHHHHHHHcCC-eEEEEcCCCCCc--ccccchhhhhhhhcccCCCCCC
Q 026543 157 DIFLAAAKRFEGGPIDS-QEILVFEDAPSGVLAAKNAGM-SVVMVPDPRLDS--SYHSNADQLLSSLLGFNPKDWG 228 (237)
Q Consensus 157 ~~~~~~l~~~~~~~~~~-~~~~~igD~~~Di~~a~~~G~-~~i~v~~~~~~~--~~~~~~~~~~~~~~el~~~l~~ 228 (237)
..+..+++++| ++| ++|++|||+.+|+++|+.+|+ .++++..+.... .....++++++++.||...+..
T Consensus 208 ~~~~~~~~~lg---i~~~~~~i~vGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~~~~ad~vi~sl~el~~~l~~ 280 (282)
T 3nuq_A 208 KAFEKAMKESG---LARYENAYFIDDSGKNIETGIKLGMKTCIHLVENEVNEILGQTPEGAIVISDILELPHVVSD 280 (282)
T ss_dssp HHHHHHHHHHT---CCCGGGEEEEESCHHHHHHHHHHTCSEEEEECSCCC----CCCCTTCEEESSGGGGGGTSGG
T ss_pred HHHHHHHHHcC---CCCcccEEEEcCCHHHHHHHHHCCCeEEEEEcCCccccccccCCCCCEEeCCHHHHHHHhhh
Confidence 99999999999 998 999999999999999999999 677777665432 2355788999999999776643
|
| >3vay_A HAD-superfamily hydrolase; rossmann fold, haloacid dehalogenase; 1.98A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=99.96 E-value=1.3e-28 Score=185.76 Aligned_cols=202 Identities=17% Similarity=0.197 Sum_probs=148.1
Q ss_pred CccEEEEecCcccccchhhHHHHHHHHHH---HcCCCCCH---HHHHH----h------cCCC----hHHHHHHHHHHhC
Q 026543 9 PITHVIFDMDGLLLDTEKFYTEVQELILA---RYNKTFDW---SLKAK----M------MGKK----AIEAAQVFVEETG 68 (237)
Q Consensus 9 ~~~~vifD~DGTL~~~~~~~~~~~~~~~~---~~g~~~~~---~~~~~----~------~~~~----~~~~~~~~~~~~~ 68 (237)
++|+|+||+||||+++...+......+.+ ..+..... ..+.. + .... .....+.+....+
T Consensus 1 mik~i~fDlDGTL~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (230)
T 3vay_A 1 MIKLVTFDLDDTLWDTAPAIVGAEAALRDWLAEQAPKLGPVPVEHLWEIRSRLLDEDPSFKHRISALRRRVLFHALEDAG 80 (230)
T ss_dssp CCCEEEECCBTTTBCSHHHHHHHHHHHHHHHHHHCTTTCSCCHHHHHHHHHHHHHHCGGGGGCHHHHHHHHHHHHHHTTT
T ss_pred CeeEEEecCcccCcCCchHHHHHHHHHHHHHHHhcCcchhhHHHHHHHHHHHHHHhCccccccHHHHHHHHHHHHHHHhC
Confidence 37999999999999999877665555443 33432211 11110 0 0001 1122233444445
Q ss_pred CCCCCCHHHHHH---HHHHHHHhhcCCCCCCccHHHHHHHHHhCCCCEEEEeCChhhHHHHHHhhhhhhhhhcceeeeCC
Q 026543 69 ISDKLSAEDFLV---QREETLQTLFPTSELMPGASHLIRHLHAKGIPMCVATGSLARHFELKTQKHRELFSLMHHVVRGD 145 (237)
Q Consensus 69 ~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~v~i~s~~~~~~~~~~~~~~~gl~~~f~~~~~~~ 145 (237)
++ .+.... .....+........++|++.++++.|+++ ++++++||+... ++..|+..+|+.+++++
T Consensus 81 ~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~-~~~~i~t~~~~~------l~~~~l~~~f~~~~~~~ 149 (230)
T 3vay_A 81 YD----SDEAQQLADESFEVFLHGRHQVQIFPEVQPTLEILAKT-FTLGVITNGNAD------VRRLGLADYFAFALCAE 149 (230)
T ss_dssp CC----HHHHHHHHHHHHHHHHHHHTCCCBCTTHHHHHHHHHTT-SEEEEEESSCCC------GGGSTTGGGCSEEEEHH
T ss_pred CC----hhhhHHHHHHHHHHHHHhhccCccCcCHHHHHHHHHhC-CeEEEEECCchh------hhhcCcHHHeeeeEEcc
Confidence 43 333222 22233333445688999999999999998 999999997654 56778999999999998
Q ss_pred CCCccCCCCCHHHHHHHHHHcCCCCCCCCcEEEEecCH-HHHHHHHHcCCeEEEEcCCCCCcccccchhhhhhhhcccCC
Q 026543 146 DPEVKQGKPSPDIFLAAAKRFEGGPIDSQEILVFEDAP-SGVLAAKNAGMSVVMVPDPRLDSSYHSNADQLLSSLLGFNP 224 (237)
Q Consensus 146 ~~~~~~~kp~~~~~~~~l~~~~~~~~~~~~~~~igD~~-~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~~~~el~~ 224 (237)
..+..||++..+..+++++| ++|++|++|||+. +|+++|+.+|+.+++|.++.........++++++++.|+..
T Consensus 150 --~~~~~kp~~~~~~~~~~~~~---~~~~~~~~vGD~~~~Di~~a~~aG~~~~~v~~~~~~~~~~~~~~~~~~~l~el~~ 224 (230)
T 3vay_A 150 --DLGIGKPDPAPFLEALRRAK---VDASAAVHVGDHPSDDIAGAQQAGMRAIWYNPQGKAWDADRLPDAEIHNLSQLPE 224 (230)
T ss_dssp --HHTCCTTSHHHHHHHHHHHT---CCGGGEEEEESCTTTTHHHHHHTTCEEEEECTTCCCCCSSSCCSEEESSGGGHHH
T ss_pred --ccCCCCcCHHHHHHHHHHhC---CCchheEEEeCChHHHHHHHHHCCCEEEEEcCCCCCCcccCCCCeeECCHHHHHH
Confidence 88899999999999999999 9999999999998 99999999999999999877743336789999999999865
Q ss_pred CC
Q 026543 225 KD 226 (237)
Q Consensus 225 ~l 226 (237)
.+
T Consensus 225 ~l 226 (230)
T 3vay_A 225 VL 226 (230)
T ss_dssp HH
T ss_pred HH
Confidence 54
|
| >4dcc_A Putative haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 1.65A {Bacteroides thetaiotaomicron} PDB: 4dfd_A 4f71_A 4f72_A | Back alignment and structure |
|---|
Probab=99.96 E-value=4.4e-28 Score=183.01 Aligned_cols=179 Identities=17% Similarity=0.191 Sum_probs=140.1
Q ss_pred CccEEEEecCcccccchhhHHHHHHHHHHHcCCCCCHHHHHHhc----------C-CChHHHHHHHHHHhCCCCCCCHHH
Q 026543 9 PITHVIFDMDGLLLDTEKFYTEVQELILARYNKTFDWSLKAKMM----------G-KKAIEAAQVFVEETGISDKLSAED 77 (237)
Q Consensus 9 ~~~~vifD~DGTL~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~----------~-~~~~~~~~~~~~~~~~~~~~~~~~ 77 (237)
++|+|+||+||||+++. ...+.+.++++|.....+....+. | .+..+..+.+.+.++.. ...+.
T Consensus 27 ~ik~viFD~DGTL~d~~---~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~--~~~~~ 101 (229)
T 4dcc_A 27 GIKNLLIDLGGVLINLD---RERCIENFKKIGFQNIEEKFCTHQLDGIFLQQEKGLITPAEFRDGIREMMGKM--VSDKQ 101 (229)
T ss_dssp CCCEEEECSBTTTBCBC---HHHHHHHHHHHTCTTHHHHHHHTHHHHHHHHHHTTCSCHHHHHHHHHHHHTSC--CCHHH
T ss_pred CCCEEEEeCCCeEEeCC---hHHHHHHHHHhCCCcHHHHHHHhcCcHHHHHHHCCCCCHHHHHHHHHHHhCCC--CCHHH
Confidence 48999999999999987 345566777888764444333221 2 35566666777777766 55555
Q ss_pred HHHHHHHHHHhhcCCCCCCccHHHHHHHHHhCCCCEEEEeCChhhHHHH--HHh---hhhhhhhhcceeeeCCCCCccCC
Q 026543 78 FLVQREETLQTLFPTSELMPGASHLIRHLHAKGIPMCVATGSLARHFEL--KTQ---KHRELFSLMHHVVRGDDPEVKQG 152 (237)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~v~i~s~~~~~~~~~--~~~---~~~gl~~~f~~~~~~~~~~~~~~ 152 (237)
+.+.+.. .. ..+.||+.++++.|+++ ++++|+||+....... ..+ +..|+..+|+.+++++ +.+..
T Consensus 102 ~~~~~~~----~~--~~~~~~~~~~l~~l~~~-~~~~i~Sn~~~~~~~~~~~~l~~~~~~~l~~~fd~i~~~~--~~~~~ 172 (229)
T 4dcc_A 102 IDAAWNS----FL--VDIPTYKLDLLLKLREK-YVVYLLSNTNDIHWKWVCKNAFPYRTFKVEDYFEKTYLSY--EMKMA 172 (229)
T ss_dssp HHHHHHT----TB--CCCCHHHHHHHHHHTTT-SEEEEEECCCHHHHHHHHHHTSCBTTBCHHHHCSEEEEHH--HHTCC
T ss_pred HHHHHHH----HH--HhccHHHHHHHHHHHhc-CcEEEEECCChHHHHHHHhhhhhhccCCHHHhCCEEEeec--ccCCC
Confidence 5544432 22 34779999999999999 9999999977765442 223 6678999999999998 88899
Q ss_pred CCCHHHHHHHHHHcCCCCCCCCcEEEEecCHHHHHHHHHcCCeEEEEcCCCC
Q 026543 153 KPSPDIFLAAAKRFEGGPIDSQEILVFEDAPSGVLAAKNAGMSVVMVPDPRL 204 (237)
Q Consensus 153 kp~~~~~~~~l~~~~~~~~~~~~~~~igD~~~Di~~a~~~G~~~i~v~~~~~ 204 (237)
||+|..|+.+++++| ++|++|++|||+.+|+++|+.+|+.++++..+..
T Consensus 173 KP~~~~~~~~~~~~g---~~~~~~~~vGD~~~Di~~a~~aG~~~i~v~~~~~ 221 (229)
T 4dcc_A 173 KPEPEIFKAVTEDAG---IDPKETFFIDDSEINCKVAQELGISTYTPKAGED 221 (229)
T ss_dssp TTCHHHHHHHHHHHT---CCGGGEEEECSCHHHHHHHHHTTCEEECCCTTCC
T ss_pred CCCHHHHHHHHHHcC---CCHHHeEEECCCHHHHHHHHHcCCEEEEECCHHH
Confidence 999999999999999 9999999999999999999999999999987654
|
| >2fi1_A Hydrolase, haloacid dehalogenase-like family; structural genomics, haloacid dehalogenase-like F PSI, protein structure initiative; 1.40A {Streptococcus pneumoniae} SCOP: c.108.1.3 | Back alignment and structure |
|---|
Probab=99.96 E-value=1.4e-27 Score=175.00 Aligned_cols=176 Identities=20% Similarity=0.250 Sum_probs=136.2
Q ss_pred CccEEEEecCcccccchhhHHHHHHHHHHHcCCCCCHHHHHHhc-CCChHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHH
Q 026543 9 PITHVIFDMDGLLLDTEKFYTEVQELILARYNKTFDWSLKAKMM-GKKAIEAAQVFVEETGISDKLSAEDFLVQREETLQ 87 (237)
Q Consensus 9 ~~~~vifD~DGTL~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (237)
++|+|+||+||||+++...+...+.++++++|.....+...... +.+.. .+....+.. ..+...+...+.
T Consensus 5 ~~k~i~fDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~----~~~~~~~~~-----~~~~~~~~~~~~ 75 (190)
T 2fi1_A 5 KYHDYIWDLGGTLLDNYETSTAAFVETLALYGITQDHDSVYQALKVSTPF----AIETFAPNL-----ENFLEKYKENEA 75 (190)
T ss_dssp CCSEEEECTBTTTBCHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHCHHH----HHHHHCTTC-----TTHHHHHHHHHH
T ss_pred cccEEEEeCCCCcCCCHHHHHHHHHHHHHHhCCCCCHHHHHHHHccccHH----HHHHHhhhH-----HHHHHHHHHHHH
Confidence 58999999999999999999999999999999887766544432 22222 222222211 111222333333
Q ss_pred hhcCCCCCCccHHHHHHHHHhCCCCEEEEeCChhhHHHHHHhhhhhhhhhcceeeeCCCCCccCCCCCHHHHHHHHHHcC
Q 026543 88 TLFPTSELMPGASHLIRHLHAKGIPMCVATGSLARHFELKTQKHRELFSLMHHVVRGDDPEVKQGKPSPDIFLAAAKRFE 167 (237)
Q Consensus 88 ~~~~~~~~~~~~~~~l~~l~~~g~~v~i~s~~~~~~~~~~~~~~~gl~~~f~~~~~~~~~~~~~~kp~~~~~~~~l~~~~ 167 (237)
+......++|++.++++.|+++|++++++||... . ....++..|+..+|+.+++++ .....||++..+..+++++|
T Consensus 76 ~~~~~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~-~-~~~~l~~~~~~~~f~~~~~~~--~~~~~kp~~~~~~~~~~~~~ 151 (190)
T 2fi1_A 76 RELEHPILFEGVSDLLEDISNQGGRHFLVSHRND-Q-VLEILEKTSIAAYFTEVVTSS--SGFKRKPNPESMLYLREKYQ 151 (190)
T ss_dssp HHTTSCCBCTTHHHHHHHHHHTTCEEEEECSSCT-H-HHHHHHHTTCGGGEEEEECGG--GCCCCTTSCHHHHHHHHHTT
T ss_pred HhcCcCccCcCHHHHHHHHHHCCCcEEEEECCcH-H-HHHHHHHcCCHhheeeeeecc--ccCCCCCCHHHHHHHHHHcC
Confidence 3333445999999999999999999999999643 3 335677789999999999988 78889999999999999999
Q ss_pred CCCCCCCcEEEEecCHHHHHHHHHcCCeEEEEcCC
Q 026543 168 GGPIDSQEILVFEDAPSGVLAAKNAGMSVVMVPDP 202 (237)
Q Consensus 168 ~~~~~~~~~~~igD~~~Di~~a~~~G~~~i~v~~~ 202 (237)
++ +|++|||+.+|+++|+.+|+.++++..+
T Consensus 152 ---~~--~~~~iGD~~~Di~~a~~aG~~~~~~~~~ 181 (190)
T 2fi1_A 152 ---IS--SGLVIGDRPIDIEAGQAAGLDTHLFTSI 181 (190)
T ss_dssp ---CS--SEEEEESSHHHHHHHHHTTCEEEECSCH
T ss_pred ---CC--eEEEEcCCHHHHHHHHHcCCeEEEECCC
Confidence 88 9999999999999999999999998764
|
| >2zg6_A Putative uncharacterized protein ST2620, probable 2-haloalkanoic; probable 2-haloalkanoic acid dehalogenase, hydrolase, structural genomics; 2.40A {Sulfolobus tokodaii} | Back alignment and structure |
|---|
Probab=99.95 E-value=2e-29 Score=189.33 Aligned_cols=200 Identities=16% Similarity=0.138 Sum_probs=139.6
Q ss_pred CccEEEEecCcccccchhhHHHHHHHHHHHcCCCCCHHHHHH-h---cCCCh--HH------HHHHHHHHhCCCCCCCHH
Q 026543 9 PITHVIFDMDGLLLDTEKFYTEVQELILARYNKTFDWSLKAK-M---MGKKA--IE------AAQVFVEETGISDKLSAE 76 (237)
Q Consensus 9 ~~~~vifD~DGTL~~~~~~~~~~~~~~~~~~g~~~~~~~~~~-~---~~~~~--~~------~~~~~~~~~~~~~~~~~~ 76 (237)
++|+|+||+||||+++...+..++..++.++|.....+.+.. + .|.+. .. ..+.+...++.. ...+
T Consensus 2 ~~k~viFDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~g~~~~~~~~~~g~~~~~~~~~~~~~~--~~~~ 79 (220)
T 2zg6_A 2 KYKAVLVDFGNTLVGFKPVFYEKVYQVLKDNGYDLDLRKVFRAYAKAMGMINYPDEDGLEHVDPKDFLYILGIY--PSER 79 (220)
T ss_dssp CCCEEEECSBTTTEEEEETTHHHHHHHHHHTTCCCCHHHHHHHHHHHGGGCCC-----CCCCCHHHHHHHHTCC--CCHH
T ss_pred CceEEEEcCCCceecccccHHHHHHHHHHHhCCCCCHHHHHHHHHHHhhhccCCCccccccccHHHHHHHcCCC--CcHH
Confidence 579999999999999999888999999999998776544322 1 22211 00 035566666665 3333
Q ss_pred HHHHHHHHHHHhhcCCCCCCccHHHHHHHHHhCCCCEEEEeCChhhHHHHHHhhhhhhhhhcceeeeCCCCCccCCCCCH
Q 026543 77 DFLVQREETLQTLFPTSELMPGASHLIRHLHAKGIPMCVATGSLARHFELKTQKHRELFSLMHHVVRGDDPEVKQGKPSP 156 (237)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~v~i~s~~~~~~~~~~~~~~~gl~~~f~~~~~~~~~~~~~~kp~~ 156 (237)
......+.+. ......++||+.++|+.|+++|++++++||+.. .. ...++.+|+..+|+.+++++ +.+..||+|
T Consensus 80 ~~~~~~~~~~--~~~~~~~~~~~~~~l~~l~~~g~~~~i~Tn~~~-~~-~~~l~~~gl~~~f~~~~~~~--~~~~~Kp~~ 153 (220)
T 2zg6_A 80 LVKELKEADI--RDGEAFLYDDTLEFLEGLKSNGYKLALVSNASP-RV-KTLLEKFDLKKYFDALALSY--EIKAVKPNP 153 (220)
T ss_dssp HHHHHHHTTT--TCEEEEECTTHHHHHHHHHTTTCEEEECCSCHH-HH-HHHHHHHTCGGGCSEEC-------------C
T ss_pred HHHHHHHHhh--cccCceECcCHHHHHHHHHHCCCEEEEEeCCcH-HH-HHHHHhcCcHhHeeEEEecc--ccCCCCCCH
Confidence 2222222110 112357899999999999999999999999765 33 45688889999999999998 888899999
Q ss_pred HHHHHHHHHcCCCCCCCCcEEEEecCHH-HHHHHHHcCCeEEEEcCCCCCcccccchhhhhhhhcccCCCC
Q 026543 157 DIFLAAAKRFEGGPIDSQEILVFEDAPS-GVLAAKNAGMSVVMVPDPRLDSSYHSNADQLLSSLLGFNPKD 226 (237)
Q Consensus 157 ~~~~~~l~~~~~~~~~~~~~~~igD~~~-Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~~~~el~~~l 226 (237)
..|..+++++| ++| ++|||+.+ |+++|+++|+.+++|.++...... +.+++++.|+...+
T Consensus 154 ~~~~~~~~~~~---~~~---~~vgD~~~~Di~~a~~aG~~~i~v~~~~~~~~~----~~~i~~l~el~~~l 214 (220)
T 2zg6_A 154 KIFGFALAKVG---YPA---VHVGDIYELDYIGAKRSYVDPILLDRYDFYPDV----RDRVKNLREALQKI 214 (220)
T ss_dssp CHHHHHHHHHC---SSE---EEEESSCCCCCCCSSSCSEEEEEBCTTSCCTTC----CSCBSSHHHHHHHH
T ss_pred HHHHHHHHHcC---CCe---EEEcCCchHhHHHHHHCCCeEEEECCCCCCCCc----ceEECCHHHHHHHH
Confidence 99999999999 988 99999998 999999999999999865332111 56778888775443
|
| >2i6x_A Hydrolase, haloacid dehalogenase-like family; HAD superfamily, struct genomics, PSI-2, protein structure initiative; HET: MSE; 2.40A {Porphyromonas gingivalis} | Back alignment and structure |
|---|
Probab=99.95 E-value=5.8e-28 Score=179.94 Aligned_cols=179 Identities=16% Similarity=0.176 Sum_probs=131.5
Q ss_pred CCccEEEEecCcccccchhhHHHHHHHHHHHcCCCCCHHHHHHhcC-----------CChHHHHHHHHHHhCCCCCCCHH
Q 026543 8 KPITHVIFDMDGLLLDTEKFYTEVQELILARYNKTFDWSLKAKMMG-----------KKAIEAAQVFVEETGISDKLSAE 76 (237)
Q Consensus 8 ~~~~~vifD~DGTL~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~ 76 (237)
+++|+|+||+||||+++...+. ...+.++|.....+....+.+ .+..+..+.+...++.. ...+
T Consensus 3 ~m~k~iiFDlDGTL~d~~~~~~---~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~--~~~~ 77 (211)
T 2i6x_A 3 AMIRNIVFDLGGVLIHLNREES---IRRFKAIGVADIEEMLDPYLQKGLFLDLESGRKSEEEFRTELSRYIGKE--LTYQ 77 (211)
T ss_dssp CCCSEEEECSBTTTEEECHHHH---HHHHHHTTCTTHHHHTCC---CCHHHHHHHSSSCHHHHHHHHHHHHTSC--CCHH
T ss_pred ccceEEEEeCCCeeEecchHHH---HHHHHHhCCchHHHHHHHHhCchHHHHHHcCCCCHHHHHHHHHHHhCCC--CCHH
Confidence 4589999999999999886543 556667776543222211111 13334444455555533 3333
Q ss_pred HHHHHHHHHHHhhcCCCCCCccHHHHHHHHHhCCCCEEEEeCChhhHHHHHHhhh------hhhhhhcceeeeCCCCCcc
Q 026543 77 DFLVQREETLQTLFPTSELMPGASHLIRHLHAKGIPMCVATGSLARHFELKTQKH------RELFSLMHHVVRGDDPEVK 150 (237)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~v~i~s~~~~~~~~~~~~~~------~gl~~~f~~~~~~~~~~~~ 150 (237)
.+...+ .. ....++|++.++++.|++ |++++++||+...... .+++. .|+..+|+.+++++ ..+
T Consensus 78 ~~~~~~----~~--~~~~~~~~~~~~l~~l~~-g~~~~i~t~~~~~~~~-~~~~~l~~~~~~~l~~~f~~~~~~~--~~~ 147 (211)
T 2i6x_A 78 QVYDAL----LG--FLEEISAEKFDYIDSLRP-DYRLFLLSNTNPYVLD-LAMSPRFLPSGRTLDSFFDKVYASC--QMG 147 (211)
T ss_dssp HHHHHH----GG--GEEEECHHHHHHHHHHTT-TSEEEEEECCCHHHHH-HHTSTTSSTTCCCGGGGSSEEEEHH--HHT
T ss_pred HHHHHH----HH--hhcccChHHHHHHHHHHc-CCeEEEEeCCCHHHHH-HHHhhhccccccCHHHHcCeEEeec--ccC
Confidence 322211 11 124688999999999999 9999999997665544 45666 78999999999988 788
Q ss_pred CCCCCHHHHHHHHHHcCCCCCCCCcEEEEecCHHHHHHHHHcCCeEEEEcCCCC
Q 026543 151 QGKPSPDIFLAAAKRFEGGPIDSQEILVFEDAPSGVLAAKNAGMSVVMVPDPRL 204 (237)
Q Consensus 151 ~~kp~~~~~~~~l~~~~~~~~~~~~~~~igD~~~Di~~a~~~G~~~i~v~~~~~ 204 (237)
..||++..+..+++++| ++|++|++|||+.+|+++|+.+|+.++++..+..
T Consensus 148 ~~Kp~~~~~~~~~~~~~---~~~~~~~~igD~~~Di~~a~~aG~~~~~~~~~~~ 198 (211)
T 2i6x_A 148 KYKPNEDIFLEMIADSG---MKPEETLFIDDGPANVATAERLGFHTYCPDNGEN 198 (211)
T ss_dssp CCTTSHHHHHHHHHHHC---CCGGGEEEECSCHHHHHHHHHTTCEEECCCTTCC
T ss_pred CCCCCHHHHHHHHHHhC---CChHHeEEeCCCHHHHHHHHHcCCEEEEECCHHH
Confidence 89999999999999999 9999999999999999999999999999977543
|
| >2b0c_A Putative phosphatase; alpha-D-glucose-1-phosphate, structural genomic protein structure initiative, midwest center for structural genomics, MCSG; HET: G1P; 2.00A {Escherichia coli} SCOP: c.108.1.2 | Back alignment and structure |
|---|
Probab=99.95 E-value=5.8e-28 Score=179.22 Aligned_cols=181 Identities=18% Similarity=0.222 Sum_probs=129.5
Q ss_pred CCCCccEEEEecCcccccchhhHHHHHHHHHHHcCCCCCHHHHHHhcC-----------CChHHHHHHHHHHhCCCCCCC
Q 026543 6 SKKPITHVIFDMDGLLLDTEKFYTEVQELILARYNKTFDWSLKAKMMG-----------KKAIEAAQVFVEETGISDKLS 74 (237)
Q Consensus 6 ~~~~~~~vifD~DGTL~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~ 74 (237)
.++++|+|+||+||||+++.. ..+...+.+++.....+....+.+ .+..+..+.+...++.. ..
T Consensus 3 ~~~~~k~viFDlDGTL~d~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~--~~ 77 (206)
T 2b0c_A 3 RKEAKMLYIFDLGNVIVDIDF---NRVLGAWSDLTRIPLASLKKSFHMGEAFHQHERGEISDEAFAEALCHEMALP--LS 77 (206)
T ss_dssp ---CCCEEEECCBTTTEEEET---HHHHHHHHHHHCCCHHHHHHHCCCCHHHHHHHTTCSCHHHHHHHHHHHHTCC--CC
T ss_pred ccccccEEEEcCCCeeecCcH---HHHHHHHHHhcCCCHHHHHHHHhcccHHHHHhcCCCCHHHHHHHHHHHhCCC--CC
Confidence 345689999999999999873 223334444454332333332222 23344445555555543 33
Q ss_pred HHHHHHHHHHHHHhhcCCCCCCccHHHHHHHHHhCCCCEEEEeCChhhHHHHHHhhh-hhhhhhcceeeeCCCCCccCCC
Q 026543 75 AEDFLVQREETLQTLFPTSELMPGASHLIRHLHAKGIPMCVATGSLARHFELKTQKH-RELFSLMHHVVRGDDPEVKQGK 153 (237)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~v~i~s~~~~~~~~~~~~~~-~gl~~~f~~~~~~~~~~~~~~k 153 (237)
.+.+.+.+ .. ....++|++.++++.|+++|++++++||+...... .+++. .|+..+|+.+++++ ..+..|
T Consensus 78 ~~~~~~~~----~~--~~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~-~~~~~~~~l~~~f~~~~~~~--~~~~~K 148 (206)
T 2b0c_A 78 YEQFSHGW----QA--VFVALRPEVIAIMHKLREQGHRVVVLSNTNRLHTT-FWPEEYPEIRDAADHIYLSQ--DLGMRK 148 (206)
T ss_dssp HHHHHHHH----HT--CEEEECHHHHHHHHHHHHTTCEEEEEECCCCCTTS-CCGGGCHHHHHHCSEEEEHH--HHTCCT
T ss_pred HHHHHHHH----HH--HhcccCccHHHHHHHHHHCCCeEEEEECCChHHHH-HHHHhccChhhheeeEEEec--ccCCCC
Confidence 33322211 11 12568999999999999999999999997665433 23444 78999999999988 788899
Q ss_pred CCHHHHHHHHHHcCCCCCCCCcEEEEecCHHHHHHHHHcCCeEEEEcCCC
Q 026543 154 PSPDIFLAAAKRFEGGPIDSQEILVFEDAPSGVLAAKNAGMSVVMVPDPR 203 (237)
Q Consensus 154 p~~~~~~~~l~~~~~~~~~~~~~~~igD~~~Di~~a~~~G~~~i~v~~~~ 203 (237)
|++..+..+++++| ++|++|++|||+.+|+++|+.+|+.++++..+.
T Consensus 149 p~~~~~~~~~~~~~---~~~~~~~~vgD~~~Di~~a~~aG~~~~~~~~~~ 195 (206)
T 2b0c_A 149 PEARIYQHVLQAEG---FSPSDTVFFDDNADNIEGANQLGITSILVKDKT 195 (206)
T ss_dssp TCHHHHHHHHHHHT---CCGGGEEEEESCHHHHHHHHTTTCEEEECCSTT
T ss_pred CCHHHHHHHHHHcC---CCHHHeEEeCCCHHHHHHHHHcCCeEEEecCCc
Confidence 99999999999999 999999999999999999999999999997653
|
| >3cnh_A Hydrolase family protein; NP_295428.1, predicted hydrolase of haloacid dehalogenase-LI superfamily; HET: MSE PG4; 1.66A {Deinococcus radiodurans R1} | Back alignment and structure |
|---|
Probab=99.95 E-value=2.8e-27 Score=174.85 Aligned_cols=178 Identities=19% Similarity=0.211 Sum_probs=130.1
Q ss_pred CccEEEEecCcccccchhhHHHHHHHHHHHcCCCCCHHHH-HHh------cC-CChHHHHHHHHHHhCCCCCCCHHHHHH
Q 026543 9 PITHVIFDMDGLLLDTEKFYTEVQELILARYNKTFDWSLK-AKM------MG-KKAIEAAQVFVEETGISDKLSAEDFLV 80 (237)
Q Consensus 9 ~~~~vifD~DGTL~~~~~~~~~~~~~~~~~~g~~~~~~~~-~~~------~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (237)
++|+|+||+||||+++.. ....+..+++++|........ ... .+ .+.......+....+.. ...+.+.
T Consensus 3 ~~k~viFDlDGTL~d~~~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~- 78 (200)
T 3cnh_A 3 TIKALFWDIGGVLLTNGW-DREQRADVAQRFGLDTDDFTERHRLAAPELELGRMTLAEYLEQVVFYQPRD--FTPEDFR- 78 (200)
T ss_dssp CCCEEEECCBTTTBCCSS-CHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHTTSSCHHHHHHHHTTTSCCS--SCHHHHH-
T ss_pred CceEEEEeCCCeeECCCc-chHHHHHHHHHcCCCHHHHHHHHHhhchHHHcCCcCHHHHHHHHHHHcCCC--CCHHHHH-
Confidence 579999999999999874 356777888888875432211 110 11 12222222222111111 2222221
Q ss_pred HHHHHHHhhcCCCCCCccHHHHHHHHHhCCCCEEEEeCChhhHHHHHHhhhhhhhhhcceeeeCCCCCccCCCCCHHHHH
Q 026543 81 QREETLQTLFPTSELMPGASHLIRHLHAKGIPMCVATGSLARHFELKTQKHRELFSLMHHVVRGDDPEVKQGKPSPDIFL 160 (237)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~v~i~s~~~~~~~~~~~~~~~gl~~~f~~~~~~~~~~~~~~kp~~~~~~ 160 (237)
..+ .....++|++.++++.|+++| +++++||+...... ..++.+|+..+|+.+++++ ..+..||++..+.
T Consensus 79 ---~~~---~~~~~~~~~~~~~l~~l~~~g-~~~i~s~~~~~~~~-~~l~~~~~~~~f~~~~~~~--~~~~~Kp~~~~~~ 148 (200)
T 3cnh_A 79 ---AVM---EEQSQPRPEVLALARDLGQRY-RMYSLNNEGRDLNE-YRIRTFGLGEFLLAFFTSS--ALGVMKPNPAMYR 148 (200)
T ss_dssp ---HHH---HHTCCBCHHHHHHHHHHTTTS-EEEEEECCCHHHHH-HHHHHHTGGGTCSCEEEHH--HHSCCTTCHHHHH
T ss_pred ---HHH---HhcCccCccHHHHHHHHHHcC-CEEEEeCCcHHHHH-HHHHhCCHHHhcceEEeec--ccCCCCCCHHHHH
Confidence 111 123569999999999999999 99999997665544 5677789999999999988 7888999999999
Q ss_pred HHHHHcCCCCCCCCcEEEEecCHHHHHHHHHcCCeEEEEcCCC
Q 026543 161 AAAKRFEGGPIDSQEILVFEDAPSGVLAAKNAGMSVVMVPDPR 203 (237)
Q Consensus 161 ~~l~~~~~~~~~~~~~~~igD~~~Di~~a~~~G~~~i~v~~~~ 203 (237)
.+++++| ++|++|++|||+.+|+++|+.+|+.+++|.++.
T Consensus 149 ~~~~~~~---~~~~~~~~vgD~~~Di~~a~~aG~~~~~~~~~~ 188 (200)
T 3cnh_A 149 LGLTLAQ---VRPEEAVMVDDRLQNVQAARAVGMHAVQCVDAA 188 (200)
T ss_dssp HHHHHHT---CCGGGEEEEESCHHHHHHHHHTTCEEEECSCHH
T ss_pred HHHHHcC---CCHHHeEEeCCCHHHHHHHHHCCCEEEEECCch
Confidence 9999999 999999999999999999999999999997653
|
| >2p11_A Hypothetical protein; putative haloacid dehalogenase-like hydrolase, structural GE joint center for structural genomics, JCSG; 2.20A {Burkholderia xenovorans} | Back alignment and structure |
|---|
Probab=99.95 E-value=2.1e-28 Score=185.06 Aligned_cols=202 Identities=16% Similarity=0.148 Sum_probs=140.8
Q ss_pred CCccEEEEecCcccccchhhHHHHHHHHHHHcCCCCCH------HHHHHhcCCC-hHHHHHHHHHHhCCCCCCCHHHHHH
Q 026543 8 KPITHVIFDMDGLLLDTEKFYTEVQELILARYNKTFDW------SLKAKMMGKK-AIEAAQVFVEETGISDKLSAEDFLV 80 (237)
Q Consensus 8 ~~~~~vifD~DGTL~~~~~~~~~~~~~~~~~~g~~~~~------~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (237)
+++|+|+||+||||+|+...+..++..+++++|..... +.+....|.. ....++.+....... ....
T Consensus 9 ~~~k~viFDlDGTL~ds~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~------~~~~ 82 (231)
T 2p11_A 9 PHDIVFLFDCDNTLLDNDHVLADLRAHMMREFGAQNSARYWEIFETLRTELGYADYLGALQRYRLEQPRD------TRLL 82 (231)
T ss_dssp CCSEEEEECCBTTTBCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHC-CCCHHHHHHHHHHHCTTC------TGGG
T ss_pred CCCeEEEEcCCCCCEecHHHHHHHHHHHHHHcCCCcchHHHHHHHHHHHhcCchHHHHHHHHHHhccccc------hHHH
Confidence 56899999999999999999999999999999875332 1222233433 222222222221111 1111
Q ss_pred HHHHHHHhhcCCCCCCccHHHHHHHHHhCCCCEEEEeCChhhHHHHHHhhhhhhhhhcceeeeCCCCCccCCCCCHHHHH
Q 026543 81 QREETLQTLFPTSELMPGASHLIRHLHAKGIPMCVATGSLARHFELKTQKHRELFSLMHHVVRGDDPEVKQGKPSPDIFL 160 (237)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~v~i~s~~~~~~~~~~~~~~~gl~~~f~~~~~~~~~~~~~~kp~~~~~~ 160 (237)
.+...+........++||+.++|+.|+++| +++|+||+...... ..++.+|+..+|+.++... ++++..+.
T Consensus 83 ~~~~~~~~~~~~~~~~~g~~~~l~~l~~~g-~~~i~Tn~~~~~~~-~~l~~~gl~~~f~~~~~~~-------~~K~~~~~ 153 (231)
T 2p11_A 83 LMSSFLIDYPFASRVYPGALNALRHLGARG-PTVILSDGDVVFQP-RKIARSGLWDEVEGRVLIY-------IHKELMLD 153 (231)
T ss_dssp GGHHHHHHCCGGGGBCTTHHHHHHHHHTTS-CEEEEEECCSSHHH-HHHHHTTHHHHTTTCEEEE-------SSGGGCHH
T ss_pred HHHHHHHHHHHhCCcCccHHHHHHHHHhCC-CEEEEeCCCHHHHH-HHHHHcCcHHhcCeeEEec-------CChHHHHH
Confidence 122333333445789999999999999999 99999997766554 5677889999998765422 23356676
Q ss_pred HHHHHcCCCCCCCCcEEEEecCHH---HHHHHHHcCCeEEEEcCCCC--Cc-cc-cc-chhhhhhhhcccCCCCCCC
Q 026543 161 AAAKRFEGGPIDSQEILVFEDAPS---GVLAAKNAGMSVVMVPDPRL--DS-SY-HS-NADQLLSSLLGFNPKDWGL 229 (237)
Q Consensus 161 ~~l~~~~~~~~~~~~~~~igD~~~---Di~~a~~~G~~~i~v~~~~~--~~-~~-~~-~~~~~~~~~~el~~~l~~l 229 (237)
.+++ + ++|++|++|||+.+ |+++|+++|+.+++|.++.. .. .. .. .++++++++.|+...+..+
T Consensus 154 ~~~~--~---~~~~~~~~vgDs~~d~~di~~A~~aG~~~i~v~~g~~~~~~~~l~~~~~~~~~i~~~~el~~~l~~~ 225 (231)
T 2p11_A 154 QVME--C---YPARHYVMVDDKLRILAAMKKAWGARLTTVFPRQGHYAFDPKEISSHPPADVTVERIGDLVEMDAEW 225 (231)
T ss_dssp HHHH--H---SCCSEEEEECSCHHHHHHHHHHHGGGEEEEEECCSSSSSCHHHHHHSCCCSEEESSGGGGGGCGGGG
T ss_pred HHHh--c---CCCceEEEEcCccchhhhhHHHHHcCCeEEEeCCCCCCCcchhccccCCCceeecCHHHHHHHHHHH
Confidence 6666 8 89999999999998 99999999999999988743 21 11 22 3899999999987766443
|
| >1qq5_A Protein (L-2-haloacid dehalogenase); hydrolase; 1.52A {Xanthobacter autotrophicus} SCOP: c.108.1.1 PDB: 1qq6_A* 1qq7_A* 1aq6_A | Back alignment and structure |
|---|
Probab=99.95 E-value=9.7e-27 Score=178.24 Aligned_cols=201 Identities=18% Similarity=0.251 Sum_probs=141.8
Q ss_pred ccEEEEecCcccccchhhHHHHHHHHHHHcCCCCC---------HHHHHHhcCC--C----hHHHHHHHHHHhCCCCCCC
Q 026543 10 ITHVIFDMDGLLLDTEKFYTEVQELILARYNKTFD---------WSLKAKMMGK--K----AIEAAQVFVEETGISDKLS 74 (237)
Q Consensus 10 ~~~vifD~DGTL~~~~~~~~~~~~~~~~~~g~~~~---------~~~~~~~~~~--~----~~~~~~~~~~~~~~~~~~~ 74 (237)
+|+|+|||||||+++...+..++.. +...+.... ........+. . .......+...++.. ..
T Consensus 2 ~k~viFDlDGTL~d~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~ 78 (253)
T 1qq5_A 2 IKAVVFDAYGTLFDVQSVADATERA-YPGRGEYITQVWRQKQLEYSWLRALMGRYADFWSVTREALAYTLGTLGLE--PD 78 (253)
T ss_dssp CCEEEECTBTTTBCTTTTHHHHHHH-STTCHHHHHHHHHHHHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHTTCC--CC
T ss_pred CcEEEEeCCCCCCccHhhHHHHHHH-HhhhhhHHHHHHHHhhhHHHHHHHHhcCcCcHHHHHHHHHHHHHHHhCCC--CC
Confidence 6899999999999998766554441 111110000 0000111111 1 112233444455543 33
Q ss_pred HHHHHHHHHHHHHhhcCCCCCCccHHHHHHHHHhCCCCEEEEeCChhhHHHHHHhhhhhhhhhcceeeeCCCCCccCCCC
Q 026543 75 AEDFLVQREETLQTLFPTSELMPGASHLIRHLHAKGIPMCVATGSLARHFELKTQKHRELFSLMHHVVRGDDPEVKQGKP 154 (237)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~v~i~s~~~~~~~~~~~~~~~gl~~~f~~~~~~~~~~~~~~kp 154 (237)
...... +.+......++||+.++++.|+ |++++++||+...... ..++.+|+..+|+.+++++ +.+..||
T Consensus 79 ~~~~~~-----~~~~~~~~~~~~~~~~~l~~l~--g~~~~i~t~~~~~~~~-~~l~~~gl~~~f~~~~~~~--~~~~~Kp 148 (253)
T 1qq5_A 79 ESFLAD-----MAQAYNRLTPYPDAAQCLAELA--PLKRAILSNGAPDMLQ-ALVANAGLTDSFDAVISVD--AKRVFKP 148 (253)
T ss_dssp HHHHHH-----HHGGGGSCCBCTTHHHHHHHHT--TSEEEEEESSCHHHHH-HHHHHTTCGGGCSEEEEGG--GGTCCTT
T ss_pred HHHHHH-----HHHHHhcCCCCccHHHHHHHHc--CCCEEEEeCcCHHHHH-HHHHHCCchhhccEEEEcc--ccCCCCC
Confidence 322222 1222335789999999999999 8999999997666544 5677789999999999998 8889999
Q ss_pred CHHHHHHHHHHcCCCCCCCCcEEEEecCHHHHHHHHHcCCeEEEEcC-----------------------CCC-Cccccc
Q 026543 155 SPDIFLAAAKRFEGGPIDSQEILVFEDAPSGVLAAKNAGMSVVMVPD-----------------------PRL-DSSYHS 210 (237)
Q Consensus 155 ~~~~~~~~l~~~~~~~~~~~~~~~igD~~~Di~~a~~~G~~~i~v~~-----------------------~~~-~~~~~~ 210 (237)
++..|..+++++| ++|++|++|||+.+|+++|+.+|+.++++.. +.. .+....
T Consensus 149 ~~~~~~~~~~~~~---~~~~~~~~vGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~ 225 (253)
T 1qq5_A 149 HPDSYALVEEVLG---VTPAEVLFVSSNGFDVGGAKNFGFSVARVARLSQEALARELVSGTIAPLTMFKALRMREETYAE 225 (253)
T ss_dssp SHHHHHHHHHHHC---CCGGGEEEEESCHHHHHHHHHHTCEEEEECCSCHHHHHHHTTSSSCCHHHHHHHHHSSCCTTSC
T ss_pred CHHHHHHHHHHcC---CCHHHEEEEeCChhhHHHHHHCCCEEEEECCcccchhhhhcccccccccccccccccccCCCCC
Confidence 9999999999999 9999999999999999999999999999987 222 223356
Q ss_pred chhhhhhhhcccCCCC
Q 026543 211 NADQLLSSLLGFNPKD 226 (237)
Q Consensus 211 ~~~~~~~~~~el~~~l 226 (237)
.++++++++.|+...+
T Consensus 226 ~~~~~~~~~~el~~~l 241 (253)
T 1qq5_A 226 APDFVVPALGDLPRLV 241 (253)
T ss_dssp CCSEEESSGGGHHHHH
T ss_pred CCCeeeCCHHHHHHHH
Confidence 7899999999986554
|
| >3m1y_A Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, phophoserine phosphatase, protein structure initiative, structural genomics; 2.40A {Helicobacter pylori} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.94 E-value=8.9e-28 Score=179.63 Aligned_cols=196 Identities=14% Similarity=0.174 Sum_probs=130.1
Q ss_pred CCCccEEEEecCcccccchhhHHHHHHHHHHHcCCCCCHHHHH--HhcC-CChHHHHHHHHHHhCCCCCCCHHHHHHHHH
Q 026543 7 KKPITHVIFDMDGLLLDTEKFYTEVQELILARYNKTFDWSLKA--KMMG-KKAIEAAQVFVEETGISDKLSAEDFLVQRE 83 (237)
Q Consensus 7 ~~~~~~vifD~DGTL~~~~~~~~~~~~~~~~~~g~~~~~~~~~--~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (237)
|+++|+|+||+||||++++. +..+.+.++......... ...+ ....+........+ .....+.
T Consensus 1 M~~~k~vifDlDGTL~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~------ 66 (217)
T 3m1y_A 1 MSLQKLAVFDFDSTLVNAET-----IESLARAWGVFDEVKTITLKAMNGETDFHKSLILRVSKL---KNMPLKL------ 66 (217)
T ss_dssp -CCCEEEEEECBTTTBSSCH-----HHHHHHHTTCHHHHTTCCCC----CCCHHHHHHHHHHTT---TTCBHHH------
T ss_pred CCCCcEEEEeCCCCCCCchh-----HHHHHHHcCchHHHHHHHHHHHcCcCCHHHHHHHHHHHh---cCCCHHH------
Confidence 45689999999999999764 234444444411100000 0000 11122222221111 1122222
Q ss_pred HHHHhhcCCCCCCccHHHHHHHHHhCCCCEEEEeCChhhHHHHHHhhhhhhhhhcceeeeCCC--------CCccCCCCC
Q 026543 84 ETLQTLFPTSELMPGASHLIRHLHAKGIPMCVATGSLARHFELKTQKHRELFSLMHHVVRGDD--------PEVKQGKPS 155 (237)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~l~~l~~~g~~v~i~s~~~~~~~~~~~~~~~gl~~~f~~~~~~~~--------~~~~~~kp~ 155 (237)
.........++|++.++++.|+++|++++++||+...... ..++.+|+..+|+.++..++ .....+||+
T Consensus 67 --~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~S~~~~~~~~-~~l~~~gl~~~f~~~~~~~~~~~~~~~~~~~~~~k~k 143 (217)
T 3m1y_A 67 --AKEVCESLPLFEGALELVSALKEKNYKVVCFSGGFDLATN-HYRDLLHLDAAFSNTLIVENDALNGLVTGHMMFSHSK 143 (217)
T ss_dssp --HHHHHTTCCBCBTHHHHHHHHHTTTEEEEEEEEEEHHHHH-HHHHHHTCSEEEEEEEEEETTEEEEEEEESCCSTTHH
T ss_pred --HHHHHhcCcCCCCHHHHHHHHHHCCCEEEEEcCCchhHHH-HHHHHcCcchhccceeEEeCCEEEeeeccCCCCCCCh
Confidence 2223344789999999999999999999999997665544 56788899999998864321 034568999
Q ss_pred HHHHHHHHHHcCCCCCCCCcEEEEecCHHHHHHHHHcCCeEEEEcCCCCCcccccchhhhhh--hhcccCCCC
Q 026543 156 PDIFLAAAKRFEGGPIDSQEILVFEDAPSGVLAAKNAGMSVVMVPDPRLDSSYHSNADQLLS--SLLGFNPKD 226 (237)
Q Consensus 156 ~~~~~~~l~~~~~~~~~~~~~~~igD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~--~~~el~~~l 226 (237)
+..++.+++++| ++|++|++|||+.+|+++|+.+|+.+++ +..+..+..|+++++ +|.++.++.
T Consensus 144 ~~~~~~~~~~~g---~~~~~~i~vGDs~~Di~~a~~aG~~~~~----~~~~~l~~~ad~v~~~~dl~~~~~~~ 209 (217)
T 3m1y_A 144 GEMLLVLQRLLN---ISKTNTLVVGDGANDLSMFKHAHIKIAF----NAKEVLKQHATHCINEPDLALIKPLI 209 (217)
T ss_dssp HHHHHHHHHHHT---CCSTTEEEEECSGGGHHHHTTCSEEEEE----SCCHHHHTTCSEEECSSBGGGGTTC-
T ss_pred HHHHHHHHHHcC---CCHhHEEEEeCCHHHHHHHHHCCCeEEE----CccHHHHHhcceeecccCHHHHHHHh
Confidence 999999999999 9999999999999999999999998776 233445667888775 556665544
|
| >2w43_A Hypothetical 2-haloalkanoic acid dehalogenase; hydrolase, metabolic process; HET: MES; 1.66A {Sulfolobus tokodaii} PDB: 2w11_A | Back alignment and structure |
|---|
Probab=99.94 E-value=1.2e-27 Score=176.98 Aligned_cols=194 Identities=13% Similarity=0.177 Sum_probs=134.8
Q ss_pred ccEEEEecCcccccchhhHHHHHHHHHHHcCCCCCH-HHHHHhcCCChHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHh
Q 026543 10 ITHVIFDMDGLLLDTEKFYTEVQELILARYNKTFDW-SLKAKMMGKKAIEAAQVFVEETGISDKLSAEDFLVQREETLQT 88 (237)
Q Consensus 10 ~~~vifD~DGTL~~~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (237)
+|+|+|||||||+++...+.. +......++..... ..+....+ .....++.+...++.. ...+.+ . ..+
T Consensus 1 ik~iiFDlDGTL~d~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~--~~~~~~---~-~~~-- 70 (201)
T 2w43_A 1 MIILAFDIFGTVLDTSTVIQE-FRNKQLEYTWLLTIMGKYVEFEE-ITKITLRYILKVRGEE--SKFDEE---L-NKW-- 70 (201)
T ss_dssp CCEEEECCBTTTEEGGGSCHH-HHHHHHHHHHHHHHHTCCCCHHH-HHHHHHHHHHHHTTCG--GGHHHH---H-HHH--
T ss_pred CcEEEEeCCCceecchhHHHH-HHHHHHHHHHHHHHccCcccHHH-HHHHHHHHHHHHhCCh--HHHHHH---H-Hhh--
Confidence 479999999999999876554 33322222110000 00000000 0122234444444311 111111 1 111
Q ss_pred hcCCCCCCccHHHHHHHHHhCCCCEEEEeCChhhHHHHHHhhhhhhhhhcceeeeCCCCCccCCCCCHHHHHHHHHHcCC
Q 026543 89 LFPTSELMPGASHLIRHLHAKGIPMCVATGSLARHFELKTQKHRELFSLMHHVVRGDDPEVKQGKPSPDIFLAAAKRFEG 168 (237)
Q Consensus 89 ~~~~~~~~~~~~~~l~~l~~~g~~v~i~s~~~~~~~~~~~~~~~gl~~~f~~~~~~~~~~~~~~kp~~~~~~~~l~~~~~ 168 (237)
....++||+.+ ++.|+++ ++++++||+...... ..++.+|+..+|+.+++++ ..+..||++..+..+++++|
T Consensus 71 --~~~~~~~~~~~-l~~l~~~-~~~~i~t~~~~~~~~-~~l~~~~l~~~f~~~~~~~--~~~~~Kp~~~~~~~~~~~~~- 142 (201)
T 2w43_A 71 --KNLKAYEDTKY-LKEISEI-AEVYALSNGSINEVK-QHLERNGLLRYFKGIFSAE--SVKEYKPSPKVYKYFLDSIG- 142 (201)
T ss_dssp --HTCEECGGGGG-HHHHHHH-SEEEEEESSCHHHHH-HHHHHTTCGGGCSEEEEGG--GGTCCTTCHHHHHHHHHHHT-
T ss_pred --cccccCCChHH-HHHHHhC-CeEEEEeCcCHHHHH-HHHHHCCcHHhCcEEEehh--hcCCCCCCHHHHHHHHHhcC-
Confidence 23778999999 9999999 999999997665544 5678889999999999998 88889999999999999997
Q ss_pred CCCCCCcEEEEecCHHHHHHHHHcCCeEEEEcCCCCC-cccccchhhhhhhhcccCCC
Q 026543 169 GPIDSQEILVFEDAPSGVLAAKNAGMSVVMVPDPRLD-SSYHSNADQLLSSLLGFNPK 225 (237)
Q Consensus 169 ~~~~~~~~~~igD~~~Di~~a~~~G~~~i~v~~~~~~-~~~~~~~~~~~~~~~el~~~ 225 (237)
|++|++|||+.+|+++|+.+|+.++++.++... +.....++++++++.|+...
T Consensus 143 ----~~~~~~vGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~~~ 196 (201)
T 2w43_A 143 ----AKEAFLVSSNAFDVIGAKNAGMRSIFVNRKNTIVDPIGGKPDVIVNDFKELYEW 196 (201)
T ss_dssp ----CSCCEEEESCHHHHHHHHHTTCEEEEECSSSCCCCTTSCCCSEEESSHHHHHHH
T ss_pred ----CCcEEEEeCCHHHhHHHHHCCCEEEEECCCCCCccccCCCCCEEECCHHHHHHH
Confidence 889999999999999999999999999886542 23345789999999888543
|
| >2c4n_A Protein NAGD; nucleotide phosphatase, HAD superfamily, UMP phosphatase, carbohydrate metabolism, hydrolase; 1.8A {Escherichia coli} SCOP: c.108.1.14 | Back alignment and structure |
|---|
Probab=99.94 E-value=9e-28 Score=182.94 Aligned_cols=203 Identities=19% Similarity=0.231 Sum_probs=147.4
Q ss_pred CccEEEEecCcccccchhhHHHH--HHHHHHHcCCCCCHHHHHHhcCCChHHHHHHHHHHhCCCCCCCHHHH---HHHHH
Q 026543 9 PITHVIFDMDGLLLDTEKFYTEV--QELILARYNKTFDWSLKAKMMGKKAIEAAQVFVEETGISDKLSAEDF---LVQRE 83 (237)
Q Consensus 9 ~~~~vifD~DGTL~~~~~~~~~~--~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~ 83 (237)
++|+|+||+||||+++...+... +.+.+++.|+...... ...|++.....+.+.. .++. .....+ .....
T Consensus 2 ~~k~i~fDlDGTLl~~~~~~~~~~~~~~~l~~~g~~~~~~t--~~~g~~~~~~~~~~~~-~g~~--~~~~~~~~~~~~~~ 76 (250)
T 2c4n_A 2 TIKNVICDIDGVLMHDNVAVPGAAEFLHGIMDKGLPLVLLT--NYPSQTGQDLANRFAT-AGVD--VPDSVFYTSAMATA 76 (250)
T ss_dssp CCCEEEEECBTTTEETTEECTTHHHHHHHHHHTTCCEEEEE--SCCSCCHHHHHHHHHH-TTCC--CCGGGEEEHHHHHH
T ss_pred CccEEEEcCcceEEeCCEeCcCHHHHHHHHHHcCCcEEEEE--CCCCCCHHHHHHHHHH-cCCC--CCHHHeEcHHHHHH
Confidence 47999999999999988776655 5556667787644211 1235666666655544 5554 221111 11122
Q ss_pred HHHHhhcCCCCCCccHHHHHHHHHhCCCCEE---------------------------------EEeCChhhHHHHHHhh
Q 026543 84 ETLQTLFPTSELMPGASHLIRHLHAKGIPMC---------------------------------VATGSLARHFELKTQK 130 (237)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~l~~l~~~g~~v~---------------------------------i~s~~~~~~~~~~~~~ 130 (237)
.+.........+.+++.++++.++++|++++ ++||.. .... ..++
T Consensus 77 ~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~t~~~-~~~~-~~~~ 154 (250)
T 2c4n_A 77 DFLRRQEGKKAYVVGEGALIHELYKAGFTITDVNPDFVIVGETRSYNWDMMHKAAYFVANGARFIATNPD-THGR-GFYP 154 (250)
T ss_dssp HHHHTSSCCEEEEECCTHHHHHHHHTTCEECSSSCSEEEECCCTTCCHHHHHHHHHHHHTTCEEEESCCC-SBSS-TTCB
T ss_pred HHHHhcCCCEEEEEcCHHHHHHHHHcCCcccCCCCCEEEEeCCCCCCHHHHHHHHHHHHCCCEEEEECCC-CCCC-Ceee
Confidence 2233334456788999999999999999988 888865 2222 2344
Q ss_pred hhh-hhhhcceeeeCCCCCccCCCCCHHHHHHHHHHcCCCCCCCCcEEEEecC-HHHHHHHHHcCCeEEEEcCCCCC-cc
Q 026543 131 HRE-LFSLMHHVVRGDDPEVKQGKPSPDIFLAAAKRFEGGPIDSQEILVFEDA-PSGVLAAKNAGMSVVMVPDPRLD-SS 207 (237)
Q Consensus 131 ~~g-l~~~f~~~~~~~~~~~~~~kp~~~~~~~~l~~~~~~~~~~~~~~~igD~-~~Di~~a~~~G~~~i~v~~~~~~-~~ 207 (237)
..| +..+|+.+.+.+ ....+||++.++..+++++| ++|++|++|||+ .||++||+.+|+.+++|.++... +.
T Consensus 155 ~~~~~~~~~~~~~~~~--~~~~~kpk~~~~~~~~~~lg---i~~~~~i~iGD~~~nDi~~~~~aG~~~~~v~~g~~~~~~ 229 (250)
T 2c4n_A 155 ACGALCAGIEKISGRK--PFYVGKPSPWIIRAALNKMQ---AHSEETVIVGDNLRTDILAGFQAGLETILVLSGVSSLDD 229 (250)
T ss_dssp CHHHHHHHHHHHHCCC--CEECSTTSTHHHHHHHHHHT---CCGGGEEEEESCTTTHHHHHHHTTCEEEEESSSSCCGGG
T ss_pred cchHHHHHHHHHhCCC--ceEeCCCCHHHHHHHHHHcC---CCcceEEEECCCchhHHHHHHHcCCeEEEECCCCCChhh
Confidence 455 667788777777 77889999999999999999 999999999999 69999999999999999998764 22
Q ss_pred cc---cchhhhhhhhcccC
Q 026543 208 YH---SNADQLLSSLLGFN 223 (237)
Q Consensus 208 ~~---~~~~~~~~~~~el~ 223 (237)
.. ..|+++++++.|+.
T Consensus 230 ~~~~~~~~~~v~~~~~el~ 248 (250)
T 2c4n_A 230 IDSMPFRPSWIYPSVAEID 248 (250)
T ss_dssp GSSCSSCCSEEESSGGGCC
T ss_pred hhhcCCCCCEEECCHHHhh
Confidence 22 57999999999974
|
| >3ib6_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.20A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=99.94 E-value=5.9e-27 Score=171.80 Aligned_cols=130 Identities=13% Similarity=0.213 Sum_probs=111.2
Q ss_pred CCCCCccHHHHHHHHHhCCCCEEEEeCChhh--HHHHHHhhhhhhhhhcceeeeCCCCCc----cCCCCCHHHHHHHHHH
Q 026543 92 TSELMPGASHLIRHLHAKGIPMCVATGSLAR--HFELKTQKHRELFSLMHHVVRGDDPEV----KQGKPSPDIFLAAAKR 165 (237)
Q Consensus 92 ~~~~~~~~~~~l~~l~~~g~~v~i~s~~~~~--~~~~~~~~~~gl~~~f~~~~~~~~~~~----~~~kp~~~~~~~~l~~ 165 (237)
...++||+.++|+.|+++|++++|+||+... ......++.+|+..+|+.+++++ +. +..||++..|..++++
T Consensus 32 ~~~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~~~~l~~~gl~~~fd~i~~~~--~~~~~~~~~KP~p~~~~~~~~~ 109 (189)
T 3ib6_A 32 EVVLRKNAKETLEKVKQLGFKQAILSNTATSDTEVIKRVLTNFGIIDYFDFIYASN--SELQPGKMEKPDKTIFDFTLNA 109 (189)
T ss_dssp TCCBCTTHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHTTCGGGEEEEEECC--TTSSTTCCCTTSHHHHHHHHHH
T ss_pred CceeCcCHHHHHHHHHHCCCEEEEEECCCccchHHHHHHHHhcCchhheEEEEEcc--ccccccCCCCcCHHHHHHHHHH
Confidence 4779999999999999999999999997651 23445688899999999999988 54 6889999999999999
Q ss_pred cCCCCCCCCcEEEEecC-HHHHHHHHHcCCeEEEEcCCCCC---c-ccccchhhhhh--hhcccCCCC
Q 026543 166 FEGGPIDSQEILVFEDA-PSGVLAAKNAGMSVVMVPDPRLD---S-SYHSNADQLLS--SLLGFNPKD 226 (237)
Q Consensus 166 ~~~~~~~~~~~~~igD~-~~Di~~a~~~G~~~i~v~~~~~~---~-~~~~~~~~~~~--~~~el~~~l 226 (237)
+| ++|++|+||||+ .+|+.+|+++|+.+++|.++... + .....++++++ ++.+|...+
T Consensus 110 ~~---~~~~~~l~VGD~~~~Di~~A~~aG~~~i~v~~~~~~~~~~~~~~~~~~~v~~~~~l~~l~~~l 174 (189)
T 3ib6_A 110 LQ---IDKTEAVMVGNTFESDIIGANRAGIHAIWLQNPEVCLQDERLPLVAPPFVIPVWDLADVPEAL 174 (189)
T ss_dssp HT---CCGGGEEEEESBTTTTHHHHHHTTCEEEEECCTTTCBCSSCCCBCSSSCEEEESSGGGHHHHH
T ss_pred cC---CCcccEEEECCCcHHHHHHHHHCCCeEEEECCccccccccccccCCCcceeccccHHhHHHHH
Confidence 99 999999999999 69999999999999999887652 1 22348899999 999886543
|
| >2oda_A Hypothetical protein pspto_2114; haloacid dehalogenase, phosphonoacetaldehyde hydrolase, protein binding; HET: EPE; 1.90A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=99.94 E-value=1.4e-26 Score=170.42 Aligned_cols=123 Identities=15% Similarity=0.219 Sum_probs=101.9
Q ss_pred CCCCCccHHHHHHHHHhCCCCEEEEeCChhhHHHHHHhhhhhhhhhcceeeeCCCCCccCCCCCHHHHHHHHHHcCCCCC
Q 026543 92 TSELMPGASHLIRHLHAKGIPMCVATGSLARHFELKTQKHRELFSLMHHVVRGDDPEVKQGKPSPDIFLAAAKRFEGGPI 171 (237)
Q Consensus 92 ~~~~~~~~~~~l~~l~~~g~~v~i~s~~~~~~~~~~~~~~~gl~~~f~~~~~~~~~~~~~~kp~~~~~~~~l~~~~~~~~ 171 (237)
...++||+.++|+.|+++|++++|+||...... ..+. + .+|+.+++++ +....||+|..|..++++++ +
T Consensus 34 ~~~~~pg~~e~L~~L~~~g~~~~i~T~~~~~~~-~~~~---~--~~~d~v~~~~--~~~~~KP~p~~~~~a~~~l~---~ 102 (196)
T 2oda_A 34 HAQLTPGAQNALKALRDQGMPCAWIDELPEALS-TPLA---A--PVNDWMIAAP--RPTAGWPQPDACWMALMALN---V 102 (196)
T ss_dssp GGSBCTTHHHHHHHHHHHTCCEEEECCSCHHHH-HHHH---T--TTTTTCEECC--CCSSCTTSTHHHHHHHHHTT---C
T ss_pred cCCcCcCHHHHHHHHHHCCCEEEEEcCChHHHH-HHhc---C--ccCCEEEECC--cCCCCCCChHHHHHHHHHcC---C
Confidence 357899999999999999999999999665543 2222 2 4689999998 78889999999999999999 9
Q ss_pred CC-CcEEEEecCHHHHHHHHHcCCeEEEEcCCCCC-------------------------cccccchhhhhhhhcccCCC
Q 026543 172 DS-QEILVFEDAPSGVLAAKNAGMSVVMVPDPRLD-------------------------SSYHSNADQLLSSLLGFNPK 225 (237)
Q Consensus 172 ~~-~~~~~igD~~~Di~~a~~~G~~~i~v~~~~~~-------------------------~~~~~~~~~~~~~~~el~~~ 225 (237)
.+ ++|+||||+.+|+++|+++|+.+|+|.++... ......++++++++.||...
T Consensus 103 ~~~~~~v~VGDs~~Di~aA~~aG~~~i~v~~g~~~~~~~~~~~~~~~~~e~~~~~~~~~~~l~~~~~d~vi~~~~eL~~~ 182 (196)
T 2oda_A 103 SQLEGCVLISGDPRLLQSGLNAGLWTIGLASCGPLCGLSPSQWQALNNAEREQRRAQATLKLYSLGVHSVIDHLGELESC 182 (196)
T ss_dssp SCSTTCEEEESCHHHHHHHHHHTCEEEEESSSSTTTCCCHHHHHHSCHHHHHHHHHHHHHHHHHTTCSEEESSGGGHHHH
T ss_pred CCCccEEEEeCCHHHHHHHHHCCCEEEEEccCCccccccHHHhhhcchhhhhhhHHHHHHHHHHcCCCEEeCCHHHHHHH
Confidence 75 89999999999999999999999999987642 01124688899999988543
|
| >1nnl_A L-3-phosphoserine phosphatase; PSP, HPSP, phospho-aspartyl, hydrolase; 1.53A {Homo sapiens} SCOP: c.108.1.4 PDB: 1l8l_A* 1l8o_A | Back alignment and structure |
|---|
Probab=99.93 E-value=8.1e-26 Score=170.07 Aligned_cols=195 Identities=13% Similarity=0.189 Sum_probs=129.7
Q ss_pred CCccEEEEecCcccccchhhHHHHHHHHHHHcCCCCC-HHHHHHhcCC--ChHHHHHHHHHHhCCCCCCCHHHHHHHHHH
Q 026543 8 KPITHVIFDMDGLLLDTEKFYTEVQELILARYNKTFD-WSLKAKMMGK--KAIEAAQVFVEETGISDKLSAEDFLVQREE 84 (237)
Q Consensus 8 ~~~~~vifD~DGTL~~~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (237)
+++|+|+||+||||+++.. +..+++.+|.... .+......+. +..+.+........ ...+.+ ..
T Consensus 12 ~~~k~viFD~DGTLvd~~~-----~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~----~~ 78 (225)
T 1nnl_A 12 YSADAVCFDVDSTVIREEG-----IDELAKICGVEDAVSEMTRRAMGGAVPFKAALTERLALIQ----PSREQV----QR 78 (225)
T ss_dssp HHCSEEEEETBTTTBSSCH-----HHHHHHHTTCTTTC------------CHHHHHHHHHHHHC----CCHHHH----HH
T ss_pred hhCCEEEEeCccccccccc-----HHHHHHHhCCcHHHHHHHHHHHcCCccHHHHHHHHHHHhc----CCHHHH----HH
Confidence 3479999999999999874 4567788887543 2223233332 22333332222222 122222 22
Q ss_pred HHHhhcCCCCCCccHHHHHHHHHhCCCCEEEEeCChhhHHHHHHhhhhhhh--hhcceee--------eCCCCCcc----
Q 026543 85 TLQTLFPTSELMPGASHLIRHLHAKGIPMCVATGSLARHFELKTQKHRELF--SLMHHVV--------RGDDPEVK---- 150 (237)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~l~~l~~~g~~v~i~s~~~~~~~~~~~~~~~gl~--~~f~~~~--------~~~~~~~~---- 150 (237)
++.. ...+++||+.++|+.|+++|++++|+||+...... ..++.+|+. .+|+.++ .+. +..
T Consensus 79 ~~~~--~~~~~~~g~~~~l~~L~~~g~~~~i~T~~~~~~~~-~~l~~~gl~~~~~f~~~~~~~~~~~~~~~--~~~~~~~ 153 (225)
T 1nnl_A 79 LIAE--QPPHLTPGIRELVSRLQERNVQVFLISGGFRSIVE-HVASKLNIPATNVFANRLKFYFNGEYAGF--DETQPTA 153 (225)
T ss_dssp HHHH--SCCCBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHH-HHHHHTTCCGGGEEEECEEECTTSCEEEE--CTTSGGG
T ss_pred HHHh--ccCCCCccHHHHHHHHHHCCCcEEEEeCChHHHHH-HHHHHcCCCcccEEeeeEEEcCCCcEecC--CCCCccc
Confidence 2221 24679999999999999999999999997665544 567888886 4777653 232 221
Q ss_pred CCCCCHHHHHHHHHHcCCCCCCCCcEEEEecCHHHHHHHHHcCCeEEEEcCCCCCcccccchhhhhhhhcccCCCC
Q 026543 151 QGKPSPDIFLAAAKRFEGGPIDSQEILVFEDAPSGVLAAKNAGMSVVMVPDPRLDSSYHSNADQLLSSLLGFNPKD 226 (237)
Q Consensus 151 ~~kp~~~~~~~~l~~~~~~~~~~~~~~~igD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~~~~el~~~l 226 (237)
..+|+|..+..+++++| + ++|++|||+.+|+++|+++|+ ++++..+.........++++++++.|+...+
T Consensus 154 ~~~~Kp~~~~~~~~~~~---~--~~~~~vGDs~~Di~~a~~ag~-~i~~~~~~~~~~~~~~~~~~~~~~~el~~~l 223 (225)
T 1nnl_A 154 ESGGKGKVIKLLKEKFH---F--KKIIMIGDGATDMEACPPADA-FIGFGGNVIRQQVKDNAKWYITDFVELLGEL 223 (225)
T ss_dssp STTHHHHHHHHHHHHHC---C--SCEEEEESSHHHHTTTTTSSE-EEEECSSCCCHHHHHHCSEEESCGGGGCC--
T ss_pred CCCchHHHHHHHHHHcC---C--CcEEEEeCcHHhHHHHHhCCe-EEEecCccccHHHHhcCCeeecCHHHHHHHH
Confidence 23578899999999999 7 799999999999999999999 7887543333333457899999999986654
|
| >3l8h_A Putative haloacid dehalogenase-like hydrolase; HAD superfamily, GMHB, D-glycero-D-manno-heptose-1, 7-bispho phosphatase; HET: FX1; 1.68A {Bordetella bronchiseptica} | Back alignment and structure |
|---|
Probab=99.93 E-value=2.2e-26 Score=167.33 Aligned_cols=127 Identities=16% Similarity=0.208 Sum_probs=103.0
Q ss_pred CCCCccHHHHHHHHHhCCCCEEEEeCChhh--------------HHHHHHhhhhhhhhhcceeee-----CCCCCccCCC
Q 026543 93 SELMPGASHLIRHLHAKGIPMCVATGSLAR--------------HFELKTQKHRELFSLMHHVVR-----GDDPEVKQGK 153 (237)
Q Consensus 93 ~~~~~~~~~~l~~l~~~g~~v~i~s~~~~~--------------~~~~~~~~~~gl~~~f~~~~~-----~~~~~~~~~k 153 (237)
..++||+.++|+.|+++|++++|+||+... ......++.+| .+|+.++. ++ .....|
T Consensus 26 ~~~~~g~~~~l~~L~~~g~~~~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~g--~~~~~~~~~~~~~~~--~~~~~K 101 (179)
T 3l8h_A 26 WIALPGSLQAIARLTQADWTVVLATNQSGLARGLFDTATLNAIHDKMHRALAQMG--GVVDAIFMCPHGPDD--GCACRK 101 (179)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEEEECTTTTTTSSCHHHHHHHHHHHHHHHHHTT--CCCCEEEEECCCTTS--CCSSST
T ss_pred ceECcCHHHHHHHHHHCCCEEEEEECCCccccCcCCHHHHHHHHHHHHHHHHhCC--CceeEEEEcCCCCCC--CCCCCC
Confidence 678999999999999999999999997641 11223455555 34555542 45 677899
Q ss_pred CCHHHHHHHHHHcCCCCCCCCcEEEEecCHHHHHHHHHcCCeEEEEcCCCCCccc----ccchhhhhhhhcccCCCC
Q 026543 154 PSPDIFLAAAKRFEGGPIDSQEILVFEDAPSGVLAAKNAGMSVVMVPDPRLDSSY----HSNADQLLSSLLGFNPKD 226 (237)
Q Consensus 154 p~~~~~~~~l~~~~~~~~~~~~~~~igD~~~Di~~a~~~G~~~i~v~~~~~~~~~----~~~~~~~~~~~~el~~~l 226 (237)
|++..|..+++++| ++|++|+||||+.+|+++|+++|+.+++|.++...... ...++++++++.|+...+
T Consensus 102 P~~~~~~~~~~~~~---~~~~~~~~vGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~~~~d~v~~~l~el~~~l 175 (179)
T 3l8h_A 102 PLPGMYRDIARRYD---VDLAGVPAVGDSLRDLQAAAQAGCAPWLVQTGNGRKTLAQGGLPEGTRVCEDLAAVAEQL 175 (179)
T ss_dssp TSSHHHHHHHHHHT---CCCTTCEEEESSHHHHHHHHHHTCEEEEESTTTHHHHHHHCCCCTTEEEESSHHHHHHHH
T ss_pred CCHHHHHHHHHHcC---CCHHHEEEECCCHHHHHHHHHCCCcEEEECCCCcchhhhhcccCCCcEEecCHHHHHHHH
Confidence 99999999999999 99999999999999999999999999999998763322 367899999999986544
|
| >1yv9_A Hydrolase, haloacid dehalogenase family; hypothetical protein, struc genomics, PSI, protein structure initiative; 2.80A {Enterococcus faecalis} SCOP: c.108.1.14 | Back alignment and structure |
|---|
Probab=99.92 E-value=6.6e-26 Score=174.68 Aligned_cols=127 Identities=12% Similarity=0.132 Sum_probs=103.4
Q ss_pred CCCCCccHHHHHHHHHhCCCCEEEEeCChhhH--HHHHHhhhhhhhhhcceeeeCCCCCccCCCCCHHHHHHHHHHcCCC
Q 026543 92 TSELMPGASHLIRHLHAKGIPMCVATGSLARH--FELKTQKHRELFSLMHHVVRGDDPEVKQGKPSPDIFLAAAKRFEGG 169 (237)
Q Consensus 92 ~~~~~~~~~~~l~~l~~~g~~v~i~s~~~~~~--~~~~~~~~~gl~~~f~~~~~~~~~~~~~~kp~~~~~~~~l~~~~~~ 169 (237)
...+++++.++++.|+ +|+++ |+||..... ....+....++..+|+.+++++ ..+.+||+|..|..+++++|
T Consensus 124 ~~~~~~~~~~~l~~l~-~g~~~-i~tn~~~~~~~~~~~~~~~~~l~~~f~~~~~~~--~~~~~KP~p~~~~~~~~~~~-- 197 (264)
T 1yv9_A 124 TELSYEKVVLATLAIQ-KGALF-IGTNPDKNIPTERGLLPGAGSVVTFVETATQTK--PVYIGKPKAIIMERAIAHLG-- 197 (264)
T ss_dssp TTCCHHHHHHHHHHHH-TTCEE-EESCCCSEEEETTEEEECHHHHHHHHHHHHTCC--CEECSTTSHHHHHHHHHHHC--
T ss_pred CCcCHHHHHHHHHHHh-CCCEE-EEECCCCcccCCCCcccCCcHHHHHHHHHhCCC--ccccCCCCHHHHHHHHHHcC--
Confidence 3567899999999997 78887 889966532 1111234556888899999888 78889999999999999999
Q ss_pred CCCCCcEEEEecCH-HHHHHHHHcCCeEEEEcCCCCCc-ccc---cchhhhhhhhcccCCC
Q 026543 170 PIDSQEILVFEDAP-SGVLAAKNAGMSVVMVPDPRLDS-SYH---SNADQLLSSLLGFNPK 225 (237)
Q Consensus 170 ~~~~~~~~~igD~~-~Di~~a~~~G~~~i~v~~~~~~~-~~~---~~~~~~~~~~~el~~~ 225 (237)
++|++|+||||++ +|+.+|+++|+.+++|.++.... ... ..|+++++++.|+...
T Consensus 198 -~~~~~~~~vGD~~~~Di~~a~~aG~~~i~v~~g~~~~~~l~~~~~~~d~v~~~l~el~~~ 257 (264)
T 1yv9_A 198 -VEKEQVIMVGDNYETDIQSGIQNGIDSLLVTSGFTPKSAVPTLPTPPTYVVDSLDEWTFE 257 (264)
T ss_dssp -SCGGGEEEEESCTTTHHHHHHHHTCEEEEETTSSSCSSSTTTCSSCCSEEESSGGGCCTT
T ss_pred -CCHHHEEEECCCcHHHHHHHHHcCCcEEEECCCCCCHHHHHhcCCCCCEEEecHHHHhhc
Confidence 9999999999995 99999999999999999987642 222 2799999999998543
|
| >4eze_A Haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 2.27A {Salmonella enterica subsp} | Back alignment and structure |
|---|
Probab=99.92 E-value=2.6e-25 Score=175.05 Aligned_cols=198 Identities=14% Similarity=0.167 Sum_probs=130.3
Q ss_pred CCCCCccEEEEecCcccccchhhHHHHHHHHHHHcCCCCCHHHH-HH-hcCC-ChHHHHHHHHHHhCCCCCCCHHHHHHH
Q 026543 5 SSKKPITHVIFDMDGLLLDTEKFYTEVQELILARYNKTFDWSLK-AK-MMGK-KAIEAAQVFVEETGISDKLSAEDFLVQ 81 (237)
Q Consensus 5 ~~~~~~~~vifD~DGTL~~~~~~~~~~~~~~~~~~g~~~~~~~~-~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (237)
..++++|+|+||+||||+++... ..+.+.+|........ .. ..+. ...+.+. .....-.....+.+..
T Consensus 103 ~~~~~~kaviFDlDGTLid~~~~-----~~la~~~g~~~~~~~~~~~~~~g~~~~~~~l~---~~~~~l~~~~~~~i~~- 173 (317)
T 4eze_A 103 QPLPANGIIAFDMDSTFIAEEGV-----DEIARELGMSTQITAITQQAMEGKLDFNASFT---RRIGMLKGTPKAVLNA- 173 (317)
T ss_dssp SSCCCSCEEEECTBTTTBSSCHH-----HHHHHHTTCHHHHHHHHHHHHTTSSCHHHHHH---HHHHTTTTCBHHHHHH-
T ss_pred ccCCCCCEEEEcCCCCccCCccH-----HHHHHHhCCcHHHHHHHHHHhcCCCCHHHHHH---HHHHHhcCCCHHHHHH-
Confidence 34567899999999999998743 4455566653222221 11 1121 2222222 2221111122222222
Q ss_pred HHHHHHhhcCCCCCCccHHHHHHHHHhCCCCEEEEeCChhhHHHHHHhhhhhhhhhcceeeeCCC--------CCccCCC
Q 026543 82 REETLQTLFPTSELMPGASHLIRHLHAKGIPMCVATGSLARHFELKTQKHRELFSLMHHVVRGDD--------PEVKQGK 153 (237)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~v~i~s~~~~~~~~~~~~~~~gl~~~f~~~~~~~~--------~~~~~~k 153 (237)
......++||+.++++.|+++|++++|+||+...... .+++.+|+..+|+.++..++ .....+|
T Consensus 174 -------~~~~~~l~pg~~e~L~~Lk~~G~~v~IvSn~~~~~~~-~~l~~lgl~~~f~~~l~~~dg~~tg~i~~~~~~~k 245 (317)
T 4eze_A 174 -------VCDRMTLSPGLLTILPVIKAKGFKTAIISGGLDIFTQ-RLKARYQLDYAFSNTVEIRDNVLTDNITLPIMNAA 245 (317)
T ss_dssp -------HHHTCCBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHH-HHHHHHTCSEEEEECEEEETTEEEEEECSSCCCHH
T ss_pred -------HHhCCEECcCHHHHHHHHHhCCCEEEEEeCccHHHHH-HHHHHcCCCeEEEEEEEeeCCeeeeeEecccCCCC
Confidence 2224679999999999999999999999997665444 67888899999987764320 0334568
Q ss_pred CCHHHHHHHHHHcCCCCCCCCcEEEEecCHHHHHHHHHcCCeEEEEcCCCCCcccccchhh--hhhhhcccCCCC
Q 026543 154 PSPDIFLAAAKRFEGGPIDSQEILVFEDAPSGVLAAKNAGMSVVMVPDPRLDSSYHSNADQ--LLSSLLGFNPKD 226 (237)
Q Consensus 154 p~~~~~~~~l~~~~~~~~~~~~~~~igD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~--~~~~~~el~~~l 226 (237)
|++..+..+++++| ++|++|++|||+.+|+++|+.+|+.+++ . ..+.....++. ...++.++...+
T Consensus 246 pkp~~~~~~~~~lg---v~~~~~i~VGDs~~Di~aa~~AG~~va~-~---~~~~~~~~a~~~i~~~~L~~ll~~L 313 (317)
T 4eze_A 246 NKKQTLVDLAARLN---IATENIIACGDGANDLPMLEHAGTGIAW-K---AKPVVREKIHHQINYHGFELLLFLI 313 (317)
T ss_dssp HHHHHHHHHHHHHT---CCGGGEEEEECSGGGHHHHHHSSEEEEE-S---CCHHHHHHCCEEESSSCGGGGGGGT
T ss_pred CCHHHHHHHHHHcC---CCcceEEEEeCCHHHHHHHHHCCCeEEe-C---CCHHHHHhcCeeeCCCCHHHHHHHH
Confidence 99999999999999 9999999999999999999999987666 2 22222233333 344666665544
|
| >3i28_A Epoxide hydrolase 2; aromatic hydrocarbons catabolism, detoxification, magnesium, metal-binding, peroxisome; HET: 34N; 1.95A {Homo sapiens} PDB: 1s8o_A* 1zd2_P* 1vj5_A* 1zd4_A* 1zd5_A* 3i1y_A* 1zd3_A* 3koo_A* 3otq_A* 4hai_A* 1cqz_A 1cr6_A* 1ek1_A* 1ek2_A* 3ans_A* 3ant_A* 3pdc_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=7.5e-25 Score=184.48 Aligned_cols=182 Identities=16% Similarity=0.201 Sum_probs=121.8
Q ss_pred CccEEEEecCcccccchhhHHHHHHHHHHHcCCCCCHHHHHHhc------------C-CChHHHHHHHHHHh-------C
Q 026543 9 PITHVIFDMDGLLLDTEKFYTEVQELILARYNKTFDWSLKAKMM------------G-KKAIEAAQVFVEET-------G 68 (237)
Q Consensus 9 ~~~~vifD~DGTL~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~------------~-~~~~~~~~~~~~~~-------~ 68 (237)
++|+|+||+||||+++. ....+......++............ + .+..+..+.+...+ .
T Consensus 2 ~~k~viFD~DGTL~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (555)
T 3i28_A 2 TLRAAVFDLDGVLALPA--VFGVLGRTEEALALPRGLLNDAFQKGGPEGATTRLMKGEITLSQWIPLMEENCRKCSETAK 79 (555)
T ss_dssp --CEEEECTBTTTEESC--THHHHHHHHHHTTCCTTHHHHHHHTTGGGSHHHHHHTTSSCHHHHHHHHHHHHHHHHHHTT
T ss_pred ceEEEEEecCCeeecch--hHHHHHHHHHHhCCcHHHHHHHHhccCcccchhHHhcCCCCHHHHHHHHHHHHHHhhhccC
Confidence 58999999999998665 3455666666777654332211111 1 11111111111110 0
Q ss_pred CCCCCCHHHHHHHHHHHHHhhcCCCCCCccHHHHHHHHHhCCCCEEEEeCC--hhhHHHHHHhhh--hhhhhhcceeeeC
Q 026543 69 ISDKLSAEDFLVQREETLQTLFPTSELMPGASHLIRHLHAKGIPMCVATGS--LARHFELKTQKH--RELFSLMHHVVRG 144 (237)
Q Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~v~i~s~~--~~~~~~~~~~~~--~gl~~~f~~~~~~ 144 (237)
.. .... ......+........++||+.++|+.|+++|++++|+||+ ...... ..+.. .|+..+|+.++++
T Consensus 80 ~~--~~~~---~~~~~~~~~~~~~~~~~~~~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~-~~~~~~~~~l~~~fd~i~~~ 153 (555)
T 3i28_A 80 VC--LPKN---FSIKEIFDKAISARKINRPMLQAALMLRKKGFTTAILTNTWLDDRAER-DGLAQLMCELKMHFDFLIES 153 (555)
T ss_dssp CC--CCTT---CCHHHHHHHHHHHCEECHHHHHHHHHHHHTTCEEEEEECCCCCCSTTH-HHHHHHHHHHHTTSSEEEEH
T ss_pred CC--CCcc---ccHHHHHHHhHhhcCcChhHHHHHHHHHHCCCEEEEEeCCCccccchh-hHHHHHhhhhhhheeEEEec
Confidence 00 0000 0012223333334689999999999999999999999997 111111 11222 3788999999999
Q ss_pred CCCCccCCCCCHHHHHHHHHHcCCCCCCCCcEEEEecCHHHHHHHHHcCCeEEEEcCCC
Q 026543 145 DDPEVKQGKPSPDIFLAAAKRFEGGPIDSQEILVFEDAPSGVLAAKNAGMSVVMVPDPR 203 (237)
Q Consensus 145 ~~~~~~~~kp~~~~~~~~l~~~~~~~~~~~~~~~igD~~~Di~~a~~~G~~~i~v~~~~ 203 (237)
+ +.+..||+|+.|..+++++| ++|++|++|||+.+|+++|+++|+.++++..+.
T Consensus 154 ~--~~~~~KP~p~~~~~~~~~lg---~~p~~~~~v~D~~~di~~a~~aG~~~~~~~~~~ 207 (555)
T 3i28_A 154 C--QVGMVKPEPQIYKFLLDTLK---ASPSEVVFLDDIGANLKPARDLGMVTILVQDTD 207 (555)
T ss_dssp H--HHTCCTTCHHHHHHHHHHHT---CCGGGEEEEESCHHHHHHHHHHTCEEEECSSHH
T ss_pred c--ccCCCCCCHHHHHHHHHHcC---CChhHEEEECCcHHHHHHHHHcCCEEEEECCCc
Confidence 9 89999999999999999999 999999999999999999999999999997643
|
| >2gmw_A D,D-heptose 1,7-bisphosphate phosphatase; Zn-binding protein, hydrolase; 1.50A {Escherichia coli} SCOP: c.108.1.19 PDB: 3esq_A 3esr_A 3l1u_A 3l1v_A 3l8e_A 3l8f_A 3l8g_A* | Back alignment and structure |
|---|
Probab=99.91 E-value=2.8e-24 Score=160.23 Aligned_cols=130 Identities=20% Similarity=0.230 Sum_probs=104.7
Q ss_pred CCCCccHHHHHHHHHhCCCCEEEEeCChh--------------hHHHHHHhhhhhhhhhcceeeeCC-C---------CC
Q 026543 93 SELMPGASHLIRHLHAKGIPMCVATGSLA--------------RHFELKTQKHRELFSLMHHVVRGD-D---------PE 148 (237)
Q Consensus 93 ~~~~~~~~~~l~~l~~~g~~v~i~s~~~~--------------~~~~~~~~~~~gl~~~f~~~~~~~-~---------~~ 148 (237)
..++||+.++|+.|+++|++++|+||+.. .......++.+|+. |+.++.+. . ..
T Consensus 49 ~~~~pg~~e~L~~L~~~G~~~~ivTn~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~--f~~~~~~~~~~~~~~~~~~~~ 126 (211)
T 2gmw_A 49 FEFIDGVIDAMRELKKMGFALVVVTNQSGIARGKFTEAQFETLTEWMDWSLADRDVD--LDGIYYCPHHPQGSVEEFRQV 126 (211)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEEEECTHHHHTSSCHHHHHHHHHHHHHHHHHTTCC--CSEEEEECCBTTCSSGGGBSC
T ss_pred CcCCcCHHHHHHHHHHCCCeEEEEECcCCcCCCccCHHHHHHHHHHHHHHHHHcCCc--eEEEEECCcCCCCcccccCcc
Confidence 67899999999999999999999999774 22333456777775 67655321 0 04
Q ss_pred ccCCCCCHHHHHHHHHHcCCCCCCCCcEEEEecCHHHHHHHHHcCCeE-EEEcCCCCCcc-cccchhhhhhhhcccCCCC
Q 026543 149 VKQGKPSPDIFLAAAKRFEGGPIDSQEILVFEDAPSGVLAAKNAGMSV-VMVPDPRLDSS-YHSNADQLLSSLLGFNPKD 226 (237)
Q Consensus 149 ~~~~kp~~~~~~~~l~~~~~~~~~~~~~~~igD~~~Di~~a~~~G~~~-i~v~~~~~~~~-~~~~~~~~~~~~~el~~~l 226 (237)
....||++..|..++++++ ++|++|+||||+.+|+++|+++|+.+ ++|.++..... ....++++++++.|+...+
T Consensus 127 ~~~~KP~p~~~~~~~~~lg---i~~~~~~~VGD~~~Di~~a~~aG~~~~i~v~~g~~~~~~~~~~~d~vi~~l~el~~~l 203 (211)
T 2gmw_A 127 CDCRKPHPGMLLSARDYLH---IDMAASYMVGDKLEDMQAAVAANVGTKVLVRTGKPITPEAENAADWVLNSLADLPQAI 203 (211)
T ss_dssp CSSSTTSCHHHHHHHHHHT---BCGGGCEEEESSHHHHHHHHHTTCSEEEEESSSSCCCHHHHHHCSEEESCGGGHHHHH
T ss_pred CcCCCCCHHHHHHHHHHcC---CCHHHEEEEcCCHHHHHHHHHCCCceEEEEecCCCccccccCCCCEEeCCHHHHHHHH
Confidence 5678999999999999999 99999999999999999999999999 99998765322 2356899999999986554
Q ss_pred C
Q 026543 227 W 227 (237)
Q Consensus 227 ~ 227 (237)
.
T Consensus 204 ~ 204 (211)
T 2gmw_A 204 K 204 (211)
T ss_dssp H
T ss_pred H
Confidence 3
|
| >2ho4_A Haloacid dehalogenase-like hydrolase domain containing 2; HDHD2, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; 2.20A {Mus musculus} PDB: 3hlt_A | Back alignment and structure |
|---|
Probab=99.91 E-value=1.6e-25 Score=171.87 Aligned_cols=206 Identities=15% Similarity=0.171 Sum_probs=134.9
Q ss_pred CCCccEEEEecCcccccchhhHHHHHH--HHHHHcCCCCCHHHHHHhcCCChHHHHHHHHHHhCCCCCCCHHHHH---HH
Q 026543 7 KKPITHVIFDMDGLLLDTEKFYTEVQE--LILARYNKTFDWSLKAKMMGKKAIEAAQVFVEETGISDKLSAEDFL---VQ 81 (237)
Q Consensus 7 ~~~~~~vifD~DGTL~~~~~~~~~~~~--~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~ 81 (237)
++++|+|+||+||||+++...+...+. +.+++.|+...... ...+.+.....+.+ ..++++ ...+.+. ..
T Consensus 4 ~~~ik~i~fDlDGTLld~~~~~~~~~~ai~~l~~~G~~~~~~t--~~~~~~~~~~~~~l-~~~g~~--~~~~~~~~~~~~ 78 (259)
T 2ho4_A 4 RRALKAVLVDLNGTLHIEDAAVPGAQEALKRLRATSVMVRFVT--NTTKETKKDLLERL-KKLEFE--ISEDEIFTSLTA 78 (259)
T ss_dssp --CCCEEEEESSSSSCC---CCTTHHHHHHHHHTSSCEEEEEE--CCSSCCHHHHHHHH-HHTTCC--CCGGGEEEHHHH
T ss_pred hhhCCEEEEeCcCcEEeCCEeCcCHHHHHHHHHHCCCeEEEEe--CCCCcCHHHHHHHH-HHcCCC--ccHHHeecHHHH
Confidence 346899999999999998876544433 34566676432111 11234444444444 456665 2211110 00
Q ss_pred HHHHHHh---------------hc----------------CCCCCCccHHHHHHHHHhCCCCEEEEeCChhhHHHHHHhh
Q 026543 82 REETLQT---------------LF----------------PTSELMPGASHLIRHLHAKGIPMCVATGSLARHFELKTQK 130 (237)
Q Consensus 82 ~~~~~~~---------------~~----------------~~~~~~~~~~~~l~~l~~~g~~v~i~s~~~~~~~~~~~~~ 130 (237)
...+... .. ....+++++.++++.++ +|+++ ++||....... ..+.
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~-~~~~~-i~t~~~~~~~~-~~~~ 155 (259)
T 2ho4_A 79 ARNLIEQKQVRPMLLLDDRALPEFTGVQTQDPNAVVIGLAPEHFHYQLLNQAFRLLL-DGAPL-IAIHKARYYKR-KDGL 155 (259)
T ss_dssp HHHHHHHHTCCEEEESCGGGGGGGTTCCCSSCCEEEECCCGGGCBHHHHHHHHHHHH-TTCCE-EESCCCSEEEE-TTEE
T ss_pred HHHHHHHcCCeEEEEeCHHHHHHHHHcCCCCCCEEEEecCCCCCCHHHHHHHHHHHH-CCCEE-EEECCCCcCcc-cCCc
Confidence 0011111 00 01236789999999999 88999 99986554322 2245
Q ss_pred hhhhhhhcc---eeeeCCCCCccCCCCCHHHHHHHHHHcCCCCCCCCcEEEEecCH-HHHHHHHHcCCeEEEEcCCCC-C
Q 026543 131 HRELFSLMH---HVVRGDDPEVKQGKPSPDIFLAAAKRFEGGPIDSQEILVFEDAP-SGVLAAKNAGMSVVMVPDPRL-D 205 (237)
Q Consensus 131 ~~gl~~~f~---~~~~~~~~~~~~~kp~~~~~~~~l~~~~~~~~~~~~~~~igD~~-~Di~~a~~~G~~~i~v~~~~~-~ 205 (237)
..++..+|+ .+++++ ....+||++..+..+++++| ++|++|++|||+. +|+++|+.+|+.+++|.++.. .
T Consensus 156 ~~~~~~~~~~~~~~~~~~--~~~~~Kp~~~~~~~~~~~lg---i~~~~~~~iGD~~~~Di~~a~~aG~~~i~v~~g~~~~ 230 (259)
T 2ho4_A 156 ALGPGPFVTALEYATDTK--AMVVGKPEKTFFLEALRDAD---CAPEEAVMIGDDCRDDVDGAQNIGMLGILVKTGKYKA 230 (259)
T ss_dssp EECSHHHHHHHHHHHTCC--CEECSTTSHHHHHHHGGGGT---CCGGGEEEEESCTTTTHHHHHHTTCEEEEESSTTCCT
T ss_pred ccCCcHHHHHHHHHhCCC--ceEecCCCHHHHHHHHHHcC---CChHHEEEECCCcHHHHHHHHHCCCcEEEECCCCCCc
Confidence 566777776 556667 77789999999999999999 9999999999999 999999999999999998743 2
Q ss_pred cc-c--ccchhhhhhhhcccCCC
Q 026543 206 SS-Y--HSNADQLLSSLLGFNPK 225 (237)
Q Consensus 206 ~~-~--~~~~~~~~~~~~el~~~ 225 (237)
.. . ...++++++++.|+...
T Consensus 231 ~~~~~~~~~~~~~~~~l~~l~~~ 253 (259)
T 2ho4_A 231 ADEEKINPPPYLTCESFPHAVDH 253 (259)
T ss_dssp TGGGGSSSCCSEEESCHHHHHHH
T ss_pred ccccccCCCCCEEECCHHHHHHH
Confidence 21 1 35688999999988543
|
| >1rku_A Homoserine kinase; phosphoserine phosphatase, phosphoserine:homoserine phosphotransferase, THRH, phosphoserine phosphoryl donor; 1.47A {Pseudomonas aeruginosa} SCOP: c.108.1.11 PDB: 1rkv_A | Back alignment and structure |
|---|
Probab=99.90 E-value=3.2e-24 Score=159.20 Aligned_cols=184 Identities=11% Similarity=0.144 Sum_probs=125.2
Q ss_pred ccEEEEecCcccccchhhHHHHHHHHHHHcCCCC------CHHHHHHhcCCChHHHHHHHHHHhCCCCCCCHHHHHHHHH
Q 026543 10 ITHVIFDMDGLLLDTEKFYTEVQELILARYNKTF------DWSLKAKMMGKKAIEAAQVFVEETGISDKLSAEDFLVQRE 83 (237)
Q Consensus 10 ~~~vifD~DGTL~~~~~~~~~~~~~~~~~~g~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (237)
+|+|+||+||||++ ..+..+++++|... ....+..+.+.. ...+.. .+ ...+.+.+
T Consensus 2 ~k~viFD~DGTL~d------~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~----~~~~~~-~~----~~~~~~~~--- 63 (206)
T 1rku_A 2 MEIACLDLEGVLVP------EIWIAFAEKTGIDALKATTRDIPDYDVLMKQR----LRILDE-HG----LKLGDIQE--- 63 (206)
T ss_dssp CEEEEEESBTTTBC------CHHHHHHHHHTCGGGGCCTTTCCCHHHHHHHH----HHHHHH-TT----CCHHHHHH---
T ss_pred CcEEEEccCCcchh------hHHHHHHHHcCChHHHHHhcCcCCHHHHHHHH----HHHHHH-CC----CCHHHHHH---
Confidence 68999999999999 36677888888752 111122221111 111111 12 22332221
Q ss_pred HHHHhhcCCCCCCccHHHHHHHHHhCCCCEEEEeCChhhHHHHHHhhhhhhhhhc-ceeeeCCCCCcc---CCCCCHHHH
Q 026543 84 ETLQTLFPTSELMPGASHLIRHLHAKGIPMCVATGSLARHFELKTQKHRELFSLM-HHVVRGDDPEVK---QGKPSPDIF 159 (237)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~l~~l~~~g~~v~i~s~~~~~~~~~~~~~~~gl~~~f-~~~~~~~~~~~~---~~kp~~~~~ 159 (237)
......++||+.++++.|+++ ++++|+||+...... .+++.+|+..+| +.+++++ +.. ..+|+|..+
T Consensus 64 -----~~~~~~~~~g~~~~l~~l~~~-~~~~i~s~~~~~~~~-~~l~~~gl~~~f~~~~~~~~--~~~~~~~~~p~p~~~ 134 (206)
T 1rku_A 64 -----VIATLKPLEGAVEFVDWLRER-FQVVILSDTFYEFSQ-PLMRQLGFPTLLCHKLEIDD--SDRVVGYQLRQKDPK 134 (206)
T ss_dssp -----HHTTCCCCTTHHHHHHHHHTT-SEEEEEEEEEHHHHH-HHHHHTTCCCEEEEEEEECT--TSCEEEEECCSSSHH
T ss_pred -----HHHhcCCCccHHHHHHHHHhc-CcEEEEECChHHHHH-HHHHHcCCcceecceeEEcC--CceEEeeecCCCchH
Confidence 224578999999999999999 999999996655444 578888999999 5666655 321 124888999
Q ss_pred HHHHHHcCCCCCCCCcEEEEecCHHHHHHHHHcCCeEEEEcCCCCCcccccchhhh-hhhhcccCCCC
Q 026543 160 LAAAKRFEGGPIDSQEILVFEDAPSGVLAAKNAGMSVVMVPDPRLDSSYHSNADQL-LSSLLGFNPKD 226 (237)
Q Consensus 160 ~~~l~~~~~~~~~~~~~~~igD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~-~~~~~el~~~l 226 (237)
..++++++ ..|++|++|||+.+|+++|+.+|+.+++ . .........++.+ ++++.++...+
T Consensus 135 ~~~l~~l~---~~~~~~~~iGD~~~Di~~a~~aG~~~~~-~--~~~~~~~~~~~~~~~~~~~~l~~~l 196 (206)
T 1rku_A 135 RQSVIAFK---SLYYRVIAAGDSYNDTTMLSEAHAGILF-H--APENVIREFPQFPAVHTYEDLKREF 196 (206)
T ss_dssp HHHHHHHH---HTTCEEEEEECSSTTHHHHHHSSEEEEE-S--CCHHHHHHCTTSCEECSHHHHHHHH
T ss_pred HHHHHHHH---hcCCEEEEEeCChhhHHHHHhcCccEEE-C--CcHHHHHHHhhhccccchHHHHHHH
Confidence 99999999 9999999999999999999999998664 2 1222222344554 77777765443
|
| >3fvv_A Uncharacterized protein; unknown function, structural genomics, PSI,MCSG, protein STR initiative, midwest center for structural genomics; 2.10A {Bordetella pertussis} | Back alignment and structure |
|---|
Probab=99.90 E-value=1.7e-22 Score=152.50 Aligned_cols=186 Identities=16% Similarity=0.056 Sum_probs=121.7
Q ss_pred CCCccEEEEecCcccccchhhHHHHHHHHHHHcCCC-CCHH-------HHHH-hcC-CChHHHHHHHHHHhCCCCCCCHH
Q 026543 7 KKPITHVIFDMDGLLLDTEKFYTEVQELILARYNKT-FDWS-------LKAK-MMG-KKAIEAAQVFVEETGISDKLSAE 76 (237)
Q Consensus 7 ~~~~~~vifD~DGTL~~~~~~~~~~~~~~~~~~g~~-~~~~-------~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~ 76 (237)
|+++++|+|||||||++++..+ .+...+...+.. .... .... ..+ .+.....+.+...+. . ...+
T Consensus 1 M~~~k~viFDlDGTL~d~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~-~--~~~~ 75 (232)
T 3fvv_A 1 MTTRRLALFDLDHTLLPLDSDY--QWADFLARTGRAGDPAEARRRNDDLMERYNRGELTAEQAAEFMLGLLA-A--HSPV 75 (232)
T ss_dssp -CCCEEEEECCBTTTBSSCHHH--HHHHHHHHTTSSSSHHHHHHHHHHHHHHHHHTCSCHHHHHHHHHHHHH-T--SCHH
T ss_pred CCCCcEEEEeCCCCCcCCchHH--HHHHHHHHcCCCCccHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHhc-C--CCHH
Confidence 4567999999999999998643 455555555543 1111 0111 112 233333333333221 1 5567
Q ss_pred HHHHHHHHHHHhhcCCCCCCccHHHHHHHHHhCCCCEEEEeCChhhHHHHHHhhhhhhhhhcceeeeCCC--------CC
Q 026543 77 DFLVQREETLQTLFPTSELMPGASHLIRHLHAKGIPMCVATGSLARHFELKTQKHRELFSLMHHVVRGDD--------PE 148 (237)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~v~i~s~~~~~~~~~~~~~~~gl~~~f~~~~~~~~--------~~ 148 (237)
.+......++.+... ..++||+.++|+.|+++|++++|+||+....+. .+++.+|+..++...+...+ ..
T Consensus 76 ~~~~~~~~~~~~~~~-~~~~~g~~~~l~~l~~~g~~~~ivS~~~~~~~~-~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~ 153 (232)
T 3fvv_A 76 ELAAWHEEFMRDVIR-PSLTVQAVDVVRGHLAAGDLCALVTATNSFVTA-PIARAFGVQHLIATDPEYRDGRYTGRIEGT 153 (232)
T ss_dssp HHHHHHHHHHHHTTG-GGCCHHHHHHHHHHHHTTCEEEEEESSCHHHHH-HHHHHTTCCEEEECEEEEETTEEEEEEESS
T ss_pred HHHHHHHHHHHHhhh-hhcCHHHHHHHHHHHHCCCEEEEEeCCCHHHHH-HHHHHcCCCEEEEcceEEECCEEeeeecCC
Confidence 777776666665543 257999999999999999999999997665444 56788888766543322110 01
Q ss_pred ccCCCCCHHHHHHHHHHcCCCCCCCCcEEEEecCHHHHHHHHHcCCeEEEE
Q 026543 149 VKQGKPSPDIFLAAAKRFEGGPIDSQEILVFEDAPSGVLAAKNAGMSVVMV 199 (237)
Q Consensus 149 ~~~~kp~~~~~~~~l~~~~~~~~~~~~~~~igD~~~Di~~a~~~G~~~i~v 199 (237)
...+++++..+..+++++|...++|++|++||||.+|+++++.+|+.++..
T Consensus 154 ~~~~~~K~~~~~~~~~~~~~~~~~~~~~~~vGDs~~D~~~~~~ag~~~~~~ 204 (232)
T 3fvv_A 154 PSFREGKVVRVNQWLAGMGLALGDFAESYFYSDSVNDVPLLEAVTRPIAAN 204 (232)
T ss_dssp CSSTHHHHHHHHHHHHHTTCCGGGSSEEEEEECCGGGHHHHHHSSEEEEES
T ss_pred CCcchHHHHHHHHHHHHcCCCcCchhheEEEeCCHhhHHHHHhCCCeEEEC
Confidence 223566778888999888711147899999999999999999999887653
|
| >1l7m_A Phosphoserine phosphatase; rossmann fold, four-helix bundle, B-hairpin, structural genomics, BSGC structure funded by NIH; 1.48A {Methanocaldococcus jannaschii} SCOP: c.108.1.4 PDB: 1f5s_A 1l7n_A 1l7p_A* 1l7o_A* 1j97_A* | Back alignment and structure |
|---|
Probab=99.89 E-value=4.3e-23 Score=153.24 Aligned_cols=193 Identities=18% Similarity=0.196 Sum_probs=121.4
Q ss_pred CccEEEEecCcccccchhhHHHHHHHHHHHcCCCCCHHHH--HHhcC-CChHHHHHHHHHHhCCCCCCCHHHHHHHHHHH
Q 026543 9 PITHVIFDMDGLLLDTEKFYTEVQELILARYNKTFDWSLK--AKMMG-KKAIEAAQVFVEETGISDKLSAEDFLVQREET 85 (237)
Q Consensus 9 ~~~~vifD~DGTL~~~~~~~~~~~~~~~~~~g~~~~~~~~--~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (237)
++|+|+|||||||+++.. +..+.+.+|........ +...+ ............ ... ....... ...
T Consensus 4 ~~k~i~fDlDGTL~d~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~-~~~~~~~----~~~ 71 (211)
T 1l7m_A 4 KKKLILFDFDSTLVNNET-----IDEIAREAGVEEEVKKITKEAMEGKLNFEQSLRKRVS--LLK-DLPIEKV----EKA 71 (211)
T ss_dssp CCEEEEEECCCCCBSSCH-----HHHHHHHTTCHHHHHHHHHHHHTTSSCHHHHHHHHHH--TTT-TCBHHHH----HHH
T ss_pred CCcEEEEeCCCCCCCccH-----HHHHHHHhCcHHHHHHHHHHHHcCCCCHHHHHHHHHH--Hhc-CCCHHHH----HHH
Confidence 479999999999999963 24455666653211111 11112 122211111110 111 0111111 111
Q ss_pred HHhhcCCCCCCccHHHHHHHHHhCCCCEEEEeCChhhHHHHHHhhhhhhhhhcceeeeCCC--------CCccCCCCCHH
Q 026543 86 LQTLFPTSELMPGASHLIRHLHAKGIPMCVATGSLARHFELKTQKHRELFSLMHHVVRGDD--------PEVKQGKPSPD 157 (237)
Q Consensus 86 ~~~~~~~~~~~~~~~~~l~~l~~~g~~v~i~s~~~~~~~~~~~~~~~gl~~~f~~~~~~~~--------~~~~~~kp~~~ 157 (237)
+ ....+.|++.++++.++++|++++++|++...... ..++.+++..+|+..+...+ .+...+++++.
T Consensus 72 ~----~~~~l~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~K~~ 146 (211)
T 1l7m_A 72 I----KRITPTEGAEETIKELKNRGYVVAVVSGGFDIAVN-KIKEKLGLDYAFANRLIVKDGKLTGDVEGEVLKENAKGE 146 (211)
T ss_dssp H----HTCCBCTTHHHHHHHHHHTTEEEEEEEEEEHHHHH-HHHHHHTCSEEEEEEEEEETTEEEEEEECSSCSTTHHHH
T ss_pred H----HhCCCCccHHHHHHHHHHCCCEEEEEcCCcHHHHH-HHHHHcCCCeEEEeeeEEECCEEcCCcccCccCCccHHH
Confidence 1 23567899999999999999999999986655443 45666777666654332210 00123456789
Q ss_pred HHHHHHHHcCCCCCCCCcEEEEecCHHHHHHHHHcCCeEEEEcCCCCCcccccchhhhhhh--hcccCCC
Q 026543 158 IFLAAAKRFEGGPIDSQEILVFEDAPSGVLAAKNAGMSVVMVPDPRLDSSYHSNADQLLSS--LLGFNPK 225 (237)
Q Consensus 158 ~~~~~l~~~~~~~~~~~~~~~igD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~~--~~el~~~ 225 (237)
.+..+++++| +++++|++|||+.||+++++.+|+.++ +. ..+..+..+++++.+ +.|+...
T Consensus 147 ~l~~~~~~lg---i~~~~~~~iGD~~~Di~~~~~ag~~~~-~~---~~~~~~~~a~~v~~~~~~~~l~~~ 209 (211)
T 1l7m_A 147 ILEKIAKIEG---INLEDTVAVGDGANDISMFKKAGLKIA-FC---AKPILKEKADICIEKRDLREILKY 209 (211)
T ss_dssp HHHHHHHHHT---CCGGGEEEEECSGGGHHHHHHCSEEEE-ES---CCHHHHTTCSEEECSSCGGGGGGG
T ss_pred HHHHHHHHcC---CCHHHEEEEecChhHHHHHHHCCCEEE-EC---CCHHHHhhcceeecchhHHHHHHh
Confidence 9999999999 999999999999999999999998643 32 223345678888888 8887543
|
| >3kd3_A Phosphoserine phosphohydrolase-like protein; csgid, niaid, S genomics, national institute of allergy and infectious DISE (niaid); 1.70A {Francisella tularensis subsp} | Back alignment and structure |
|---|
Probab=99.89 E-value=1.5e-24 Score=161.84 Aligned_cols=128 Identities=13% Similarity=0.171 Sum_probs=93.7
Q ss_pred CCCCccHHHHHHHHHhCCCCEEEEeCChhhHHHHHHhhhhhhh--hhcce--eeeCCCC--CccCCCCCHHHHHHHH-HH
Q 026543 93 SELMPGASHLIRHLHAKGIPMCVATGSLARHFELKTQKHRELF--SLMHH--VVRGDDP--EVKQGKPSPDIFLAAA-KR 165 (237)
Q Consensus 93 ~~~~~~~~~~l~~l~~~g~~v~i~s~~~~~~~~~~~~~~~gl~--~~f~~--~~~~~~~--~~~~~kp~~~~~~~~l-~~ 165 (237)
..++|++.++++.|+++|++++++||+...... ..++.+|+. .+|.. +++.+.. .....+|++..+...+ +.
T Consensus 81 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 159 (219)
T 3kd3_A 81 NLLTDGIKELVQDLKNKGFEIWIFSGGLSESIQ-PFADYLNIPRENIFAVETIWNSDGSFKELDNSNGACDSKLSAFDKA 159 (219)
T ss_dssp TTBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHH-HHHHHHTCCGGGEEEEEEEECTTSBEEEEECTTSTTTCHHHHHHHH
T ss_pred ccCChhHHHHHHHHHHCCCeEEEEcCCcHHHHH-HHHHHcCCCcccEEEeeeeecCCCceeccCCCCCCcccHHHHHHHH
Confidence 558899999999999999999999997665544 567777773 35542 2222200 0245677765555544 55
Q ss_pred cCCCCCCCCcEEEEecCHHHHHHHHHcCCeEEEEcCCCC--CcccccchhhhhhhhcccCCC
Q 026543 166 FEGGPIDSQEILVFEDAPSGVLAAKNAGMSVVMVPDPRL--DSSYHSNADQLLSSLLGFNPK 225 (237)
Q Consensus 166 ~~~~~~~~~~~~~igD~~~Di~~a~~~G~~~i~v~~~~~--~~~~~~~~~~~~~~~~el~~~ 225 (237)
+| ++|+++++|||+.+|++++ ++|+.++++..+.. .+..+..++++++++.|+...
T Consensus 160 ~~---~~~~~~~~vGD~~~Di~~~-~~G~~~~~v~~~~~~~~~~~~~~ad~v~~~~~el~~~ 217 (219)
T 3kd3_A 160 KG---LIDGEVIAIGDGYTDYQLY-EKGYATKFIAYMEHIEREKVINLSKYVARNVAELASL 217 (219)
T ss_dssp GG---GCCSEEEEEESSHHHHHHH-HHTSCSEEEEECSSCCCHHHHHHCSEEESSHHHHHHH
T ss_pred hC---CCCCCEEEEECCHhHHHHH-hCCCCcEEEeccCccccHHHHhhcceeeCCHHHHHHh
Confidence 69 9999999999999999998 68998777766544 344567799999999988544
|
| >2fea_A 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; 2633731, structural genomics, joint center for structural GE JCSG; HET: MSE; 2.00A {Bacillus subtilis} SCOP: c.108.1.20 | Back alignment and structure |
|---|
Probab=99.89 E-value=1.4e-24 Score=164.55 Aligned_cols=191 Identities=12% Similarity=0.134 Sum_probs=123.5
Q ss_pred CccEEEEecCcccccchhhHHHHHHHHHHHcCCCCCHHHH-HHhc-C-CChHHHHHHHHHHhCCCCCCCHHHHHHHHHHH
Q 026543 9 PITHVIFDMDGLLLDTEKFYTEVQELILARYNKTFDWSLK-AKMM-G-KKAIEAAQVFVEETGISDKLSAEDFLVQREET 85 (237)
Q Consensus 9 ~~~~vifD~DGTL~~~~~~~~~~~~~~~~~~g~~~~~~~~-~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (237)
++++|+|||||||++++.. ..+++.++. ...... .... + .+..+.++.++..+.. ...+++.+ +
T Consensus 5 ~~k~viFD~DGTL~d~ds~-----~~~~~~~~~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~---~~~~~~~~----~ 71 (236)
T 2fea_A 5 RKPFIICDFDGTITMNDNI-----INIMKTFAP-PEWMALKDGVLSKTLSIKEGVGRMFGLLPS---SLKEEITS----F 71 (236)
T ss_dssp CCEEEEECCTTTTBSSCHH-----HHHHHHHSC-THHHHHHHHHHTTSSCHHHHHHHHHTTSBG---GGHHHHHH----H
T ss_pred CCcEEEEeCCCCCCccchH-----HHHHHHhch-hhHHHHHHHHHhCcCcHHHHHHHHHHhcCC---ChHHHHHH----H
Confidence 4689999999999976432 222333332 122222 2122 2 3344444444433210 11222222 2
Q ss_pred HHhhcCCCCCCccHHHHHHHHHhCCCCEEEEeCChhhHHHHHHhhhhhhhhhcceeeeCCCCCccC--------CCCCHH
Q 026543 86 LQTLFPTSELMPGASHLIRHLHAKGIPMCVATGSLARHFELKTQKHRELFSLMHHVVRGDDPEVKQ--------GKPSPD 157 (237)
Q Consensus 86 ~~~~~~~~~~~~~~~~~l~~l~~~g~~v~i~s~~~~~~~~~~~~~~~gl~~~f~~~~~~~~~~~~~--------~kp~~~ 157 (237)
. .....++||+.++|+.|+++|++++|+||+...... .+++ |+..+ +.+++++ .... .||+|.
T Consensus 72 ~---~~~~~~~pg~~~~l~~L~~~g~~~~ivS~~~~~~~~-~~l~--~l~~~-~~v~~~~--~~~~~~~~~~~~~kp~p~ 142 (236)
T 2fea_A 72 V---LEDAKIREGFREFVAFINEHEIPFYVISGGMDFFVY-PLLE--GIVEK-DRIYCNH--ASFDNDYIHIDWPHSCKG 142 (236)
T ss_dssp H---HHHCCBCTTHHHHHHHHHHHTCCEEEEEEEEHHHHH-HHHT--TTSCG-GGEEEEE--EECSSSBCEEECTTCCCT
T ss_pred H---hcCCCCCccHHHHHHHHHhCCCeEEEEeCCcHHHHH-HHHh--cCCCC-CeEEeee--eEEcCCceEEecCCCCcc
Confidence 1 123779999999999999999999999997665444 4555 66665 8888776 4332 788888
Q ss_pred H-HH-------HHHHHcCCCCCCCCcEEEEecCHHHHHHHHHcCCeEEEEcCCCCCccccc-chhhhhhhhcccCCCC
Q 026543 158 I-FL-------AAAKRFEGGPIDSQEILVFEDAPSGVLAAKNAGMSVVMVPDPRLDSSYHS-NADQLLSSLLGFNPKD 226 (237)
Q Consensus 158 ~-~~-------~~l~~~~~~~~~~~~~~~igD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~-~~~~~~~~~~el~~~l 226 (237)
. +. .++++++ ++|++|+||||+.+|+.+|+++|+.++. .+........ .++++++++.|+...+
T Consensus 143 ~~~~~~~~~K~~~~~~~~---~~~~~~~~vGDs~~Di~~a~~aG~~~~~--~~~~~~~~~~~~~~~~~~~~~el~~~l 215 (236)
T 2fea_A 143 TCSNQCGCCKPSVIHELS---EPNQYIIMIGDSVTDVEAAKLSDLCFAR--DYLLNECREQNLNHLPYQDFYEIRKEI 215 (236)
T ss_dssp TCCSCCSSCHHHHHHHHC---CTTCEEEEEECCGGGHHHHHTCSEEEEC--HHHHHHHHHTTCCEECCSSHHHHHHHH
T ss_pred ccccccCCcHHHHHHHHh---ccCCeEEEEeCChHHHHHHHhCCeeeec--hHHHHHHHHCCCCeeecCCHHHHHHHH
Confidence 4 44 8999999 9999999999999999999999998763 1111111122 2778888888876544
|
| >3p96_A Phosphoserine phosphatase SERB; ssgcid, structural genomics, structural genomics center for infectious disease, hydrolas; 2.05A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=99.89 E-value=4e-23 Score=168.92 Aligned_cols=172 Identities=19% Similarity=0.205 Sum_probs=116.6
Q ss_pred CCCccEEEEecCcccccchhhHHHHHHHHHHHcCCCCCHHHH-HHh-cC-CChHHHHHHHHHHhCCCCCCCHHHHHHHHH
Q 026543 7 KKPITHVIFDMDGLLLDTEKFYTEVQELILARYNKTFDWSLK-AKM-MG-KKAIEAAQVFVEETGISDKLSAEDFLVQRE 83 (237)
Q Consensus 7 ~~~~~~vifD~DGTL~~~~~~~~~~~~~~~~~~g~~~~~~~~-~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (237)
.+++|+|+|||||||+++.. +..+.+.+|.......+ ... .+ ....+.+......+. ....+.+....
T Consensus 182 ~~~~k~viFD~DgTLi~~~~-----~~~la~~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~l~---~~~~~~~~~~~- 252 (415)
T 3p96_A 182 RRAKRLIVFDVDSTLVQGEV-----IEMLAAKAGAEGQVAAITDAAMRGELDFAQSLQQRVATLA---GLPATVIDEVA- 252 (415)
T ss_dssp TTCCCEEEECTBTTTBSSCH-----HHHHHHHTTCHHHHHHHHHHHHTTCSCHHHHHHHHHHTTT---TCBTHHHHHHH-
T ss_pred ccCCcEEEEcCcccCcCCch-----HHHHHHHcCCcHHHHHHHHHHhcCCcCHHHHHHHHHHHhc---CCCHHHHHHHH-
Confidence 35689999999999999873 34455556653222111 111 11 122222222222211 12222222222
Q ss_pred HHHHhhcCCCCCCccHHHHHHHHHhCCCCEEEEeCChhhHHHHHHhhhhhhhhhcceee-------eCC-CCCccCCCCC
Q 026543 84 ETLQTLFPTSELMPGASHLIRHLHAKGIPMCVATGSLARHFELKTQKHRELFSLMHHVV-------RGD-DPEVKQGKPS 155 (237)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~l~~l~~~g~~v~i~s~~~~~~~~~~~~~~~gl~~~f~~~~-------~~~-~~~~~~~kp~ 155 (237)
....++||+.++++.|+++|++++|+||+...... .+++.+|+..+|+..+ ++. ......+||+
T Consensus 253 -------~~~~~~pg~~e~l~~Lk~~G~~~~ivS~~~~~~~~-~~~~~lgl~~~~~~~l~~~dg~~tg~~~~~v~~~kpk 324 (415)
T 3p96_A 253 -------GQLELMPGARTTLRTLRRLGYACGVVSGGFRRIIE-PLAEELMLDYVAANELEIVDGTLTGRVVGPIIDRAGK 324 (415)
T ss_dssp -------HHCCBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHH-HHHHHTTCSEEEEECEEEETTEEEEEECSSCCCHHHH
T ss_pred -------HhCccCccHHHHHHHHHHCCCEEEEEcCCcHHHHH-HHHHHcCccceeeeeEEEeCCEEEeeEccCCCCCcch
Confidence 23589999999999999999999999997665444 6788889887766432 211 0034457999
Q ss_pred HHHHHHHHHHcCCCCCCCCcEEEEecCHHHHHHHHHcCCeEEE
Q 026543 156 PDIFLAAAKRFEGGPIDSQEILVFEDAPSGVLAAKNAGMSVVM 198 (237)
Q Consensus 156 ~~~~~~~l~~~~~~~~~~~~~~~igD~~~Di~~a~~~G~~~i~ 198 (237)
+..+..+++++| ++|+++++|||+.+|+.+|+.+|+.+++
T Consensus 325 ~~~~~~~~~~~g---i~~~~~i~vGD~~~Di~~a~~aG~~va~ 364 (415)
T 3p96_A 325 ATALREFAQRAG---VPMAQTVAVGDGANDIDMLAAAGLGIAF 364 (415)
T ss_dssp HHHHHHHHHHHT---CCGGGEEEEECSGGGHHHHHHSSEEEEE
T ss_pred HHHHHHHHHHcC---cChhhEEEEECCHHHHHHHHHCCCeEEE
Confidence 999999999999 9999999999999999999999988775
|
| >2pr7_A Haloacid dehalogenase/epoxide hydrolase family; NP_599989.1, uncharacterized protein, structural genomics; 1.44A {Corynebacterium glutamicum atcc 13032} | Back alignment and structure |
|---|
Probab=99.88 E-value=1.2e-22 Score=140.90 Aligned_cols=102 Identities=17% Similarity=0.175 Sum_probs=91.1
Q ss_pred CCccHHHHHHHHHhCCCCEEEEeCChhhHHHHHHhhhhhhhhhcceeeeCCCCCccCCCCCHHHHHHHHHHcCCCCCCCC
Q 026543 95 LMPGASHLIRHLHAKGIPMCVATGSLARHFELKTQKHRELFSLMHHVVRGDDPEVKQGKPSPDIFLAAAKRFEGGPIDSQ 174 (237)
Q Consensus 95 ~~~~~~~~l~~l~~~g~~v~i~s~~~~~~~~~~~~~~~gl~~~f~~~~~~~~~~~~~~kp~~~~~~~~l~~~~~~~~~~~ 174 (237)
++|++.++++.|+++|++++++||+...... ..++.+|+..+|+.+++++ +.+..||++..|..++++++ ++|+
T Consensus 19 ~~~~~~~~l~~L~~~G~~~~i~S~~~~~~~~-~~l~~~~l~~~f~~i~~~~--~~~~~Kp~~~~~~~~~~~~~---~~~~ 92 (137)
T 2pr7_A 19 DQRRWRNLLAAAKKNGVGTVILSNDPGGLGA-APIRELETNGVVDKVLLSG--ELGVEKPEEAAFQAAADAID---LPMR 92 (137)
T ss_dssp HHHHHHHHHHHHHHTTCEEEEEECSCCGGGG-HHHHHHHHTTSSSEEEEHH--HHSCCTTSHHHHHHHHHHTT---CCGG
T ss_pred cCccHHHHHHHHHHCCCEEEEEeCCCHHHHH-HHHHHCChHhhccEEEEec--cCCCCCCCHHHHHHHHHHcC---CCcc
Confidence 4567788999999999999999997766544 4567788999999999988 77889999999999999999 9999
Q ss_pred cEEEEecCHHHHHHHHHcCCeEEEEcCC
Q 026543 175 EILVFEDAPSGVLAAKNAGMSVVMVPDP 202 (237)
Q Consensus 175 ~~~~igD~~~Di~~a~~~G~~~i~v~~~ 202 (237)
++++|||+.+|+++|+++|+.++++.++
T Consensus 93 ~~~~vgD~~~di~~a~~~G~~~i~~~~~ 120 (137)
T 2pr7_A 93 DCVLVDDSILNVRGAVEAGLVGVYYQQF 120 (137)
T ss_dssp GEEEEESCHHHHHHHHHHTCEEEECSCH
T ss_pred cEEEEcCCHHHHHHHHHCCCEEEEeCCh
Confidence 9999999999999999999999998764
|
| >2o2x_A Hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; 1.50A {Mesorhizobium loti} SCOP: c.108.1.19 | Back alignment and structure |
|---|
Probab=99.88 E-value=1e-22 Score=152.54 Aligned_cols=130 Identities=22% Similarity=0.245 Sum_probs=105.2
Q ss_pred CCCCccHHHHHHHHHhCCCCEEEEeCChhh--------------HHHHHHhhhhhhhhhcceee-eC-----------CC
Q 026543 93 SELMPGASHLIRHLHAKGIPMCVATGSLAR--------------HFELKTQKHRELFSLMHHVV-RG-----------DD 146 (237)
Q Consensus 93 ~~~~~~~~~~l~~l~~~g~~v~i~s~~~~~--------------~~~~~~~~~~gl~~~f~~~~-~~-----------~~ 146 (237)
..++||+.++|+.|+++|++++++||+... ......++.+|+. |+.++ +. +
T Consensus 55 ~~~~~g~~e~L~~L~~~G~~~~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~--~~~~~~~~~~~~g~~~~~~~- 131 (218)
T 2o2x_A 55 IVLRPQMLPAIATANRAGIPVVVVTNQSGIARGYFGWSAFAAVNGRVLELLREEGVF--VDMVLACAYHEAGVGPLAIP- 131 (218)
T ss_dssp CCBCGGGHHHHHHHHHHTCCEEEEEECHHHHTTSCCHHHHHHHHHHHHHHHHHTTCC--CSEEEEECCCTTCCSTTCCS-
T ss_pred CeECcCHHHHHHHHHHCCCEEEEEcCcCCCCcccccHHHHHHHHHHHHHHHHHcCCc--eeeEEEeecCCCCceeeccc-
Confidence 668999999999999999999999997762 2233456666653 55443 33 4
Q ss_pred CCccCCCCCHHHHHHHHHHcCCCCCCCCcEEEEecCHHHHHHHHHcCCeE-EEEcCCCCCc-ccccchhhhhhhhcccCC
Q 026543 147 PEVKQGKPSPDIFLAAAKRFEGGPIDSQEILVFEDAPSGVLAAKNAGMSV-VMVPDPRLDS-SYHSNADQLLSSLLGFNP 224 (237)
Q Consensus 147 ~~~~~~kp~~~~~~~~l~~~~~~~~~~~~~~~igD~~~Di~~a~~~G~~~-i~v~~~~~~~-~~~~~~~~~~~~~~el~~ 224 (237)
....+||++..|..++++++ ++|++++||||+.+|+++|+++|+.+ ++|.++.... .....++++++++.|+..
T Consensus 132 -~~~~~KP~~~~~~~~~~~~~---i~~~~~~~VGD~~~Di~~a~~aG~~~~i~v~~g~~~~~~~~~~~~~~i~~l~el~~ 207 (218)
T 2o2x_A 132 -DHPMRKPNPGMLVEAGKRLA---LDLQRSLIVGDKLADMQAGKRAGLAQGWLVDGEAAVQPGFAIRPLRDSSELGDLLA 207 (218)
T ss_dssp -SCTTSTTSCHHHHHHHHHHT---CCGGGCEEEESSHHHHHHHHHTTCSEEEEETCCCEEETTEEEEEESSHHHHHHHHH
T ss_pred -CCccCCCCHHHHHHHHHHcC---CCHHHEEEEeCCHHHHHHHHHCCCCEeEEEecCCCCcccccCCCCEecccHHHHHH
Confidence 56788999999999999999 99999999999999999999999999 9999876532 234578999999999876
Q ss_pred CCCCC
Q 026543 225 KDWGL 229 (237)
Q Consensus 225 ~l~~l 229 (237)
.+..+
T Consensus 208 ~l~~~ 212 (218)
T 2o2x_A 208 AIETL 212 (218)
T ss_dssp HHHHT
T ss_pred HHHHH
Confidence 65443
|
| >1q92_A 5(3)-deoxyribonucleotidase; alpha-beta rossman fold, hydrolase; HET: DRM; 1.40A {Homo sapiens} SCOP: c.108.1.8 PDB: 1mh9_A* 1q91_A* 1z4m_A* 1z4i_A* 1z4j_A* 1z4l_A* 1z4k_A* 1z4p_X* 1z4q_A* 2jau_A* 2jaw_A* 3u19_A* 3u13_A 4e88_A | Back alignment and structure |
|---|
Probab=99.87 E-value=4.8e-24 Score=157.32 Aligned_cols=181 Identities=12% Similarity=0.021 Sum_probs=124.3
Q ss_pred CccEEEEecCcccccchhhHHHHHHHHHHHcCCCCCHHHHHHhcCCChHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHh
Q 026543 9 PITHVIFDMDGLLLDTEKFYTEVQELILARYNKTFDWSLKAKMMGKKAIEAAQVFVEETGISDKLSAEDFLVQREETLQT 88 (237)
Q Consensus 9 ~~~~vifD~DGTL~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (237)
++++|+|||||||+|+...+..++.+++++++ ..+.+. ..+.+..+.+.. +. . +........+.+.
T Consensus 3 ~~k~viFDlDGTL~Ds~~~~~~~~~~~~~~~~-~~~~~~---~~~~~~~~~~~~----~~-~-----~~~~~~~~~~~~~ 68 (197)
T 1q92_A 3 RALRVLVDMDGVLADFEGGFLRKFRARFPDQP-FIALED---RRGFWVSEQYGR----LR-P-----GLSEKAISIWESK 68 (197)
T ss_dssp CCEEEEECSBTTTBCHHHHHHHHHHHHCTTSC-CCCGGG---CCSSCHHHHHHH----HS-T-----THHHHHHHHHTST
T ss_pred CceEEEEeCCCCCccCcHHHHHHHHHHHhcCC-CCCHHH---hcCCcHHHHHHh----cC-H-----HHHHHHHHHHHhh
Confidence 46899999999999999999999998888763 233332 223333322222 21 1 1112222222111
Q ss_pred -hcCCCCCCccHHHHHHHHHhC-CCCEEEEeCChhhHHHHHHhhhhhhhh-hcceeeeCCCCCccCCCCCHHHHHHHHHH
Q 026543 89 -LFPTSELMPGASHLIRHLHAK-GIPMCVATGSLARHFELKTQKHRELFS-LMHHVVRGDDPEVKQGKPSPDIFLAAAKR 165 (237)
Q Consensus 89 -~~~~~~~~~~~~~~l~~l~~~-g~~v~i~s~~~~~~~~~~~~~~~gl~~-~f~~~~~~~~~~~~~~kp~~~~~~~~l~~ 165 (237)
......++||+.++|+.|+++ |++++|+||+...... ..++..|+.. +|+ ..++++
T Consensus 69 ~~~~~~~~~~g~~e~L~~L~~~~g~~~~ivT~~~~~~~~-~~l~~~~l~~~~f~--------------------~~~~~~ 127 (197)
T 1q92_A 69 NFFFELEPLPGAVEAVKEMASLQNTDVFICTSPIKMFKY-CPYEKYAWVEKYFG--------------------PDFLEQ 127 (197)
T ss_dssp TTTTTCCBCTTHHHHHHHHHHSTTEEEEEEECCCSCCSS-HHHHHHHHHHHHHC--------------------GGGGGG
T ss_pred hhhhcCCcCcCHHHHHHHHHhcCCCeEEEEeCCccchHH-HHHHHhchHHHhch--------------------HHHHHH
Confidence 233578999999999999999 9999999997765443 3567778877 875 346788
Q ss_pred cCCCCCCCCcEEEEecCHHH----HHHHH-HcCCeEEEEcCCCCCcccccchhhhhhhhc-ccCCCCC
Q 026543 166 FEGGPIDSQEILVFEDAPSG----VLAAK-NAGMSVVMVPDPRLDSSYHSNADQLLSSLL-GFNPKDW 227 (237)
Q Consensus 166 ~~~~~~~~~~~~~igD~~~D----i~~a~-~~G~~~i~v~~~~~~~~~~~~~~~~~~~~~-el~~~l~ 227 (237)
++ ++|++|++|||+..| +.+|+ ++|+.++++..+.+...........++++. ++...+.
T Consensus 128 l~---~~~~~~~~vgDs~~dD~~~~~~a~~~aG~~~i~~~~~~~~~~~~~~~~~~v~~~~~~l~~~l~ 192 (197)
T 1q92_A 128 IV---LTRDKTVVSADLLIDDRPDITGAEPTPSWEHVLFTACHNQHLQLQPPRRRLHSWADDWKAILD 192 (197)
T ss_dssp EE---ECSCSTTSCCSEEEESCSCCCCSCSSCSSEEEEECCTTTTTCCCCTTCEEECCTTSCHHHHHH
T ss_pred hc---cCCccEEEECcccccCCchhhhcccCCCceEEEecCcccccccccccchhhhhHHHHHHHHhc
Confidence 99 999999999999988 99999 999999999876553221111233677884 5544443
|
| >2wm8_A MDP-1, magnesium-dependent phosphatase 1; haloacid dehalogenase, protein phosphatase, hydrolase, magne metal-binding; 1.75A {Homo sapiens} PDB: 1u7o_A 1u7p_A | Back alignment and structure |
|---|
Probab=99.87 E-value=1.6e-21 Score=142.59 Aligned_cols=102 Identities=14% Similarity=0.242 Sum_probs=89.3
Q ss_pred CCCCCccHHHHHHHHHhCCCCEEEEeCCh-hhHHHHHHhhhhhhhhhcceeeeCCCCCccCCCCCHHHHHHHHHHcCCCC
Q 026543 92 TSELMPGASHLIRHLHAKGIPMCVATGSL-ARHFELKTQKHRELFSLMHHVVRGDDPEVKQGKPSPDIFLAAAKRFEGGP 170 (237)
Q Consensus 92 ~~~~~~~~~~~l~~l~~~g~~v~i~s~~~-~~~~~~~~~~~~gl~~~f~~~~~~~~~~~~~~kp~~~~~~~~l~~~~~~~ 170 (237)
...++|++.++|+.|+++|++++|+||+. ..... .+++.+|+..+|+.++... +|++..|..++++++
T Consensus 66 ~~~~~~g~~e~L~~L~~~G~~v~ivT~~~~~~~~~-~~l~~~gl~~~f~~~~~~~-------~~k~~~~~~~~~~~~--- 134 (187)
T 2wm8_A 66 DVRLYPEVPEVLKRLQSLGVPGAAASRTSEIEGAN-QLLELFDLFRYFVHREIYP-------GSKITHFERLQQKTG--- 134 (187)
T ss_dssp EECCCTTHHHHHHHHHHHTCCEEEEECCSCHHHHH-HHHHHTTCTTTEEEEEESS-------SCHHHHHHHHHHHHC---
T ss_pred ccCcchhHHHHHHHHHHCCceEEEEeCCCChHHHH-HHHHHcCcHhhcceeEEEe-------CchHHHHHHHHHHcC---
Confidence 46789999999999999999999999976 34444 5678889999999875443 467899999999999
Q ss_pred CCCCcEEEEecCHHHHHHHHHcCCeEEEEcCCCC
Q 026543 171 IDSQEILVFEDAPSGVLAAKNAGMSVVMVPDPRL 204 (237)
Q Consensus 171 ~~~~~~~~igD~~~Di~~a~~~G~~~i~v~~~~~ 204 (237)
++|++|++|||+.+|+++|+++|+.+++|.++..
T Consensus 135 ~~~~~~~~igD~~~Di~~a~~aG~~~i~v~~g~~ 168 (187)
T 2wm8_A 135 IPFSQMIFFDDERRNIVDVSKLGVTCIHIQNGMN 168 (187)
T ss_dssp CCGGGEEEEESCHHHHHHHHTTTCEEEECSSSCC
T ss_pred CChHHEEEEeCCccChHHHHHcCCEEEEECCCCC
Confidence 9999999999999999999999999999988765
|
| >1vjr_A 4-nitrophenylphosphatase; TM1742, structural genomics, JCSG, protein structure initiative, joint center for structural G hydrolase; 2.40A {Thermotoga maritima} SCOP: c.108.1.14 PDB: 1pw5_A* | Back alignment and structure |
|---|
Probab=99.87 E-value=4.4e-23 Score=159.42 Aligned_cols=125 Identities=15% Similarity=0.178 Sum_probs=99.6
Q ss_pred CCCCccHHHHHHHHHhCCCCEEEEeCChhhHHHH--HHhhhhhhhhhcceeeeCCCCC-ccCCCCCHHHHHHHHHHcCCC
Q 026543 93 SELMPGASHLIRHLHAKGIPMCVATGSLARHFEL--KTQKHRELFSLMHHVVRGDDPE-VKQGKPSPDIFLAAAKRFEGG 169 (237)
Q Consensus 93 ~~~~~~~~~~l~~l~~~g~~v~i~s~~~~~~~~~--~~~~~~gl~~~f~~~~~~~~~~-~~~~kp~~~~~~~~l~~~~~~ 169 (237)
..+++++.++++.+ +.|+++ ++||........ ...+..++..+|+.+++.+ . ...+||++.++..+++++|
T Consensus 136 ~~~~~~~~~~l~~l-~~~~~~-i~tn~~~~~~~~~~~~~~~~~l~~~~~~~~~~~--~~~~~~kpk~~~~~~~~~~lg-- 209 (271)
T 1vjr_A 136 TLTYERLKKACILL-RKGKFY-IATHPDINCPSKEGPVPDAGSIMAAIEASTGRK--PDLIAGKPNPLVVDVISEKFG-- 209 (271)
T ss_dssp TCCHHHHHHHHHHH-TTTCEE-EESCCCSEECCTTSCEECHHHHHHHHHHHHSCC--CSEECSTTSTHHHHHHHHHHT--
T ss_pred CcCHHHHHHHHHHH-HCCCeE-EEECCCccccCCCCccccccHHHHHHHHHhCCC--CcccCCCCCHHHHHHHHHHhC--
Confidence 35678999999999 778887 889865432111 1234456778888888777 7 7889999999999999999
Q ss_pred CCCCCcEEEEecCH-HHHHHHHHcCCeEEEEcCCCCCcc-cc---cchhhhhhhhcccCC
Q 026543 170 PIDSQEILVFEDAP-SGVLAAKNAGMSVVMVPDPRLDSS-YH---SNADQLLSSLLGFNP 224 (237)
Q Consensus 170 ~~~~~~~~~igD~~-~Di~~a~~~G~~~i~v~~~~~~~~-~~---~~~~~~~~~~~el~~ 224 (237)
++|++|++|||+. ||++||+.+|+.+++|.++..... .. ..++++++++.|+..
T Consensus 210 -i~~~e~i~iGD~~~nDi~~a~~aG~~~i~v~~g~~~~~~~~~~~~~~~~~i~~l~el~~ 268 (271)
T 1vjr_A 210 -VPKERMAMVGDRLYTDVKLGKNAGIVSILVLTGETTPEDLERAETKPDFVFKNLGELAK 268 (271)
T ss_dssp -CCGGGEEEEESCHHHHHHHHHHHTCEEEEESSSSCCHHHHHHCSSCCSEEESSHHHHHH
T ss_pred -CCCceEEEECCCcHHHHHHHHHcCCeEEEECCCCCCHHHHhhcCCCCCEEECCHHHHHH
Confidence 9999999999995 999999999999999998766422 11 368899999988753
|
| >2fpr_A Histidine biosynthesis bifunctional protein HISB; histidinola phosphate phosphatase, bifunctional enzyme structural genomics; 1.70A {Escherichia coli} SCOP: c.108.1.19 PDB: 2fps_A 2fpu_A* 2fpx_A 2fpw_A* | Back alignment and structure |
|---|
Probab=99.86 E-value=2.1e-22 Score=145.71 Aligned_cols=104 Identities=15% Similarity=0.202 Sum_probs=85.8
Q ss_pred CCCCccHHHHHHHHHhCCCCEEEEeCCh--------------hhHHHHHHhhhhhhhhhcceeeeC-----CCCCccCCC
Q 026543 93 SELMPGASHLIRHLHAKGIPMCVATGSL--------------ARHFELKTQKHRELFSLMHHVVRG-----DDPEVKQGK 153 (237)
Q Consensus 93 ~~~~~~~~~~l~~l~~~g~~v~i~s~~~--------------~~~~~~~~~~~~gl~~~f~~~~~~-----~~~~~~~~k 153 (237)
..++||+.++|+.|+++|++++|+||+. ........++..|+. |+.++.+ + +.+..|
T Consensus 41 ~~~~pg~~e~L~~L~~~G~~l~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~--fd~v~~s~~~~~~--~~~~~K 116 (176)
T 2fpr_A 41 LAFEPGVIPQLLKLQKAGYKLVMITNQDGLGTQSFPQADFDGPHNLMMQIFTSQGVQ--FDEVLICPHLPAD--ECDCRK 116 (176)
T ss_dssp CCBCTTHHHHHHHHHHTTEEEEEEEECTTTTBTTBCHHHHHHHHHHHHHHHHHTTCC--EEEEEEECCCGGG--CCSSST
T ss_pred CcCCccHHHHHHHHHHCCCEEEEEECCccccccccchHhhhhhHHHHHHHHHHcCCC--eeEEEEcCCCCcc--cccccC
Confidence 6789999999999999999999999972 223334567777776 8888643 5 677899
Q ss_pred CCHHHHHHHHHHcCCCCCCCCcEEEEecCHHHHHHHHHcCCeEEEEcCCC
Q 026543 154 PSPDIFLAAAKRFEGGPIDSQEILVFEDAPSGVLAAKNAGMSVVMVPDPR 203 (237)
Q Consensus 154 p~~~~~~~~l~~~~~~~~~~~~~~~igD~~~Di~~a~~~G~~~i~v~~~~ 203 (237)
|++..|..++++++ ++|++|+||||+.+|+++|+++|+.+++|.++.
T Consensus 117 P~p~~~~~~~~~~g---i~~~~~l~VGD~~~Di~~A~~aG~~~i~v~~~~ 163 (176)
T 2fpr_A 117 PKVKLVERYLAEQA---MDRANSYVIGDRATDIQLAENMGINGLRYDRET 163 (176)
T ss_dssp TSCGGGGGGC-------CCGGGCEEEESSHHHHHHHHHHTSEEEECBTTT
T ss_pred CCHHHHHHHHHHcC---CCHHHEEEEcCCHHHHHHHHHcCCeEEEEcCCc
Confidence 99999999999999 999999999999999999999999999998764
|
| >4ap9_A Phosphoserine phosphatase; hydrolase, haloacid dehalogenase superfamily, NDSB; HET: 1PS; 1.78A {Thermococcus onnurineus} PDB: 4b6j_A | Back alignment and structure |
|---|
Probab=99.86 E-value=3.5e-22 Score=147.15 Aligned_cols=189 Identities=20% Similarity=0.130 Sum_probs=118.8
Q ss_pred ccEEE-EecCcccccchhhHHHHHHHHHHHcCCCCCHHHHHHh-cCC-ChHHHHHHHHHHhCCCCCCCHHHHHHHHHHHH
Q 026543 10 ITHVI-FDMDGLLLDTEKFYTEVQELILARYNKTFDWSLKAKM-MGK-KAIEAAQVFVEETGISDKLSAEDFLVQREETL 86 (237)
Q Consensus 10 ~~~vi-fD~DGTL~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (237)
++.++ ||+||||+++. .+..+.+.+|........... .+. ............+. . ... ..+
T Consensus 8 mk~ivifDlDGTL~d~~-----~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~--~~~--------~~~ 71 (201)
T 4ap9_A 8 MKKVAVIDIEGTLTDFE-----FWREMARITGKREIEELLEKGLSGEVEWLDSLLKRVGLIR-G--IDE--------GTF 71 (201)
T ss_dssp GSCEEEEECBTTTBCCC-----HHHHHHHHHCCHHHHHHHHHHHHTSSCHHHHHHHHHHHTT-T--CBH--------HHH
T ss_pred cceeEEecccCCCcchH-----HHHHHHHHhChHHHHHHHHHHhcCCCCHHHHHHHHHHHhc-C--CCH--------HHH
Confidence 55555 99999999887 566666777761111111111 111 11222221111111 0 111 122
Q ss_pred HhhcCCCCCCccHHHHHHHHHhCCCCEEEEeCChhhHHHHHHhhhhhhhhhcceeeeCCCCCccCCCCCHHHHHHHHHHc
Q 026543 87 QTLFPTSELMPGASHLIRHLHAKGIPMCVATGSLARHFELKTQKHRELFSLMHHVVRGDDPEVKQGKPSPDIFLAAAKRF 166 (237)
Q Consensus 87 ~~~~~~~~~~~~~~~~l~~l~~~g~~v~i~s~~~~~~~~~~~~~~~gl~~~f~~~~~~~~~~~~~~kp~~~~~~~~l~~~ 166 (237)
........+.|++.++++.|+++|++++++||+...... .. +.+|+..+++.+...++ .....+|.+..+...++++
T Consensus 72 ~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~-~~-~~~~~~~~~~~~~~~~~-~~~~~~~~~~~k~~~l~~l 148 (201)
T 4ap9_A 72 LRTREKVNVSPEARELVETLREKGFKVVLISGSFEEVLE-PF-KELGDEFMANRAIFEDG-KFQGIRLRFRDKGEFLKRF 148 (201)
T ss_dssp HHGGGGCCCCHHHHHHHHHHHHTTCEEEEEEEEETTTSG-GG-TTTSSEEEEEEEEEETT-EEEEEECCSSCHHHHHGGG
T ss_pred HHHHHhCCCChhHHHHHHHHHHCCCeEEEEeCCcHHHHH-HH-HHcCchhheeeEEeeCC-ceECCcCCccCHHHHHHhc
Confidence 334455789999999999999999999999996665444 45 77788777666554441 1112455555555666665
Q ss_pred CCCCCCCCcEEEEecCHHHHHHHHHcCCeEEEEcCCCCCcccccchhhhhhhhcccCCCCCCC
Q 026543 167 EGGPIDSQEILVFEDAPSGVLAAKNAGMSVVMVPDPRLDSSYHSNADQLLSSLLGFNPKDWGL 229 (237)
Q Consensus 167 ~~~~~~~~~~~~igD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~~~~el~~~l~~l 229 (237)
++++|++|||+.+|+++|+.+|+. +.+..+.. .++++++++.|+...+..+
T Consensus 149 -----~~~~~i~iGD~~~Di~~~~~ag~~-v~~~~~~~------~ad~v~~~~~el~~~l~~l 199 (201)
T 4ap9_A 149 -----RDGFILAMGDGYADAKMFERADMG-IAVGREIP------GADLLVKDLKELVDFIKNL 199 (201)
T ss_dssp -----TTSCEEEEECTTCCHHHHHHCSEE-EEESSCCT------TCSEEESSHHHHHHHHHTC
T ss_pred -----CcCcEEEEeCCHHHHHHHHhCCce-EEECCCCc------cccEEEccHHHHHHHHHHh
Confidence 589999999999999999999987 44433221 8889999999886655443
|
| >2x4d_A HLHPP, phospholysine phosphohistidine inorganic pyrophos phosphatase; hydrolase; 1.92A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.85 E-value=1.6e-22 Score=155.80 Aligned_cols=208 Identities=15% Similarity=0.153 Sum_probs=124.3
Q ss_pred CCCccEEEEecCcccccch-----hhHHHHH-HHHHHHcCCCCCHHHHHHhcCCChHHHHHHHHHHhCCCCCCCHHHH--
Q 026543 7 KKPITHVIFDMDGLLLDTE-----KFYTEVQ-ELILARYNKTFDWSLKAKMMGKKAIEAAQVFVEETGISDKLSAEDF-- 78 (237)
Q Consensus 7 ~~~~~~vifD~DGTL~~~~-----~~~~~~~-~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 78 (237)
|+++|+|+||+||||+++. ....... .+.+++.|+.+... ....|++.....+.+. ..++. .....+
T Consensus 9 m~~~k~i~fDlDGTLl~s~~~~~~~~~~~~~a~~~l~~~G~~~~~~--t~~~gr~~~~~~~~l~-~~g~~--~~~~~~~~ 83 (271)
T 2x4d_A 9 LAGVRGVLLDISGVLYDSGAGGGTAIAGSVEAVARLKRSRLKVRFC--TNESAASRAELVGQLQ-RLGFD--ISEQEVTA 83 (271)
T ss_dssp TTTCCEEEECCBTTTEECCTTTCEECTTHHHHHHHHHHSSSEEEEE--CCCCSSCHHHHHHHHH-HTTCC--CCGGGEEC
T ss_pred HhcCCEEEEeCCCeEEecCCCCCccCcCHHHHHHHHHHCCCcEEEE--ECCCCCCHHHHHHHHH-HCCCC--CCHHHeec
Confidence 5568999999999999963 1111121 44567777754311 1123555555554443 45654 221111
Q ss_pred --HHHHHHHHHhhcC------------------------------CCCCCccHHHHHHHHHhC-CCCEEEEeCChhhHHH
Q 026543 79 --LVQREETLQTLFP------------------------------TSELMPGASHLIRHLHAK-GIPMCVATGSLARHFE 125 (237)
Q Consensus 79 --~~~~~~~~~~~~~------------------------------~~~~~~~~~~~l~~l~~~-g~~v~i~s~~~~~~~~ 125 (237)
............. ....++++.+.++.++++ ++++ ++++.......
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~-i~~~~~~~~~~ 162 (271)
T 2x4d_A 84 PAPAACQILKERGLRPYLLIHDGVRSEFDQIDTSNPNCVVIADAGESFSYQNMNNAFQVLMELEKPVL-ISLGKGRYYAA 162 (271)
T ss_dssp HHHHHHHHHHHHTCCEEEECCGGGGGGGTTSCCSSCSEEEECCCGGGCCHHHHHHHHHHHHHCSSCCE-EEECCCSEEEE
T ss_pred HHHHHHHHHHHcCCEEEEEeCHHHHHHHHHcCCCCCCEEEEecCCCCcCHHHHHHHHHHHHhcCCCeE-EEEcCCccccc
Confidence 1111111111100 011244566667777766 6766 55553322111
Q ss_pred HHHhhhhhhhhhcc---eeeeCCCCCccCCCCCHHHHHHHHHHcCCCCCCCCcEEEEecCH-HHHHHHHHcCCeEEEEcC
Q 026543 126 LKTQKHRELFSLMH---HVVRGDDPEVKQGKPSPDIFLAAAKRFEGGPIDSQEILVFEDAP-SGVLAAKNAGMSVVMVPD 201 (237)
Q Consensus 126 ~~~~~~~gl~~~f~---~~~~~~~~~~~~~kp~~~~~~~~l~~~~~~~~~~~~~~~igD~~-~Di~~a~~~G~~~i~v~~ 201 (237)
......++..+|+ ...+.+ ....+||++.++..+++++| +++++|++|||+. ||++||+.+|+.+++|.+
T Consensus 163 -~~~~~~~~~~~~~~~~~~~~~~--~~~~~kpk~~~~~~~~~~lg---i~~~~~i~iGD~~~nDi~~a~~aG~~~~~v~~ 236 (271)
T 2x4d_A 163 -TSGLMLDVGPYMKALEYACGIK--AEVVGKPSPEFFKSALQAIG---VEAHQAVMIGDDIVGDVGGAQRCGMRALQVRT 236 (271)
T ss_dssp -TTEEEECHHHHHHHHHHHHTCC--CEEESTTCHHHHHHHHHHHT---CCGGGEEEEESCTTTTHHHHHHTTCEEEEESS
T ss_pred -CCCcccChhHHHHHHHHHhCCc--eeeccCCCHHHHHHHHHHhC---CCcceEEEECCCcHHHHHHHHHCCCcEEEEcC
Confidence 1112223333333 333445 56678999999999999999 9999999999998 999999999999999998
Q ss_pred CCCCc-c-c--ccchhhhhhhhcccCCCC
Q 026543 202 PRLDS-S-Y--HSNADQLLSSLLGFNPKD 226 (237)
Q Consensus 202 ~~~~~-~-~--~~~~~~~~~~~~el~~~l 226 (237)
+.... . . ...++++++++.|+...+
T Consensus 237 g~~~~~~~~~~~~~~~~~~~~~~el~~~l 265 (271)
T 2x4d_A 237 GKFRPSDEHHPEVKADGYVDNLAEAVDLL 265 (271)
T ss_dssp TTCCGGGGGCSSCCCSEEESSHHHHHHHH
T ss_pred CCCCchhhcccCCCCCEEeCCHHHHHHHH
Confidence 75422 1 1 245899999999885443
|
| >2i7d_A 5'(3')-deoxyribonucleotidase, cytosolic type; hydrolase; HET: DUR; 1.20A {Homo sapiens} PDB: 2jar_A* 2jao_A* | Back alignment and structure |
|---|
Probab=99.85 E-value=1.3e-23 Score=154.48 Aligned_cols=172 Identities=14% Similarity=0.116 Sum_probs=118.6
Q ss_pred ccEEEEecCcccccchhhHHHHHHHHHHHcCCC-CCHHHHHHhcCCChHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHh
Q 026543 10 ITHVIFDMDGLLLDTEKFYTEVQELILARYNKT-FDWSLKAKMMGKKAIEAAQVFVEETGISDKLSAEDFLVQREETLQT 88 (237)
Q Consensus 10 ~~~vifD~DGTL~~~~~~~~~~~~~~~~~~g~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (237)
.++|+|||||||+|+...+..++..+++ |.+ .+.+.+..+. ... .+... .. . ..+.+...+.+
T Consensus 2 ~k~viFDlDGTL~Ds~~~~~~~~~~~~~--g~~~~~~~~~~~~~---~~~----~~~~~-~~--~----~~~~~~~~~~~ 65 (193)
T 2i7d_A 2 SVRVLVDMDGVLADFEAGLLRGFRRRFP--EEPHVPLEQRRGFL---ARE----QYRAL-RP--D----LADKVASVYEA 65 (193)
T ss_dssp CEEEEECSBTTTBCHHHHHHHHHHHHST--TSCCCCGGGCCSSC---HHH----HHHHH-CT--T----HHHHHHHHHTS
T ss_pred CcEEEEECCCcCccchhHHHHHHHHHhc--CCCCCCHHHHHHhh---HHH----HHHHH-hH--H----HHHHHHHHHHh
Confidence 4799999999999999999999888776 664 3444332221 112 22222 11 1 12223333333
Q ss_pred h--cCCCCCCccHHHHHHHHHhC-CCCEEEEeCChhhHHHHHHhhhhhhhhhcceeeeCCCCCccCCCCCHHHHHHHHHH
Q 026543 89 L--FPTSELMPGASHLIRHLHAK-GIPMCVATGSLARHFELKTQKHRELFSLMHHVVRGDDPEVKQGKPSPDIFLAAAKR 165 (237)
Q Consensus 89 ~--~~~~~~~~~~~~~l~~l~~~-g~~v~i~s~~~~~~~~~~~~~~~gl~~~f~~~~~~~~~~~~~~kp~~~~~~~~l~~ 165 (237)
. .....++||+.++|+.|+++ |++++|+||+...... ..++.+|+ |+.+++++ ++++
T Consensus 66 ~~~~~~~~~~~g~~e~L~~L~~~~g~~~~ivT~~~~~~~~-~~l~~~gl---f~~i~~~~----------------~~~~ 125 (193)
T 2i7d_A 66 PGFFLDLEPIPGALDAVREMNDLPDTQVFICTSPLLKYHH-CVGEKYRW---VEQHLGPQ----------------FVER 125 (193)
T ss_dssp TTTTTTCCBCTTHHHHHHHHHTSTTEEEEEEECCCSSCTT-THHHHHHH---HHHHHCHH----------------HHTT
T ss_pred cCccccCccCcCHHHHHHHHHhCCCCeEEEEeCCChhhHH-HHHHHhCc---hhhhcCHH----------------HHHH
Confidence 2 34578999999999999999 9999999997665444 45666777 77766432 6889
Q ss_pred cCCCCCCCCcEEEEecCHHH----HHHHH-HcCCeEEEEcCCCCCcccccchhh-hhhhhcc
Q 026543 166 FEGGPIDSQEILVFEDAPSG----VLAAK-NAGMSVVMVPDPRLDSSYHSNADQ-LLSSLLG 221 (237)
Q Consensus 166 ~~~~~~~~~~~~~igD~~~D----i~~a~-~~G~~~i~v~~~~~~~~~~~~~~~-~~~~~~e 221 (237)
++ ++|++|++|||+.+| +.+|+ ++|+.++++..+.+... ...+++ .++++++
T Consensus 126 ~~---~~~~~~~~vgDs~~dD~~~i~~A~~~aG~~~i~~~~~~~~~~-~~~~~~~~v~~~~~ 183 (193)
T 2i7d_A 126 II---LTRDKTVVLGDLLIDDKDTVRGQEETPSWEHILFTCCHNRHL-VLPPTRRRLLSWSD 183 (193)
T ss_dssp EE---ECSCGGGBCCSEEEESSSCCCSSCSSCSSEEEEECCGGGTTC-CCCTTSCEECSTTS
T ss_pred cC---CCcccEEEECCchhhCcHHHhhcccccccceEEEEeccCccc-ccccchHHHhhHHH
Confidence 99 999999999999988 99999 99999999987544322 112233 4666633
|
| >3n28_A Phosphoserine phosphatase; HAD family hydrolase, structural genomics, PSI, protein STRU initiative, nysgrc; 2.30A {Vibrio cholerae} | Back alignment and structure |
|---|
Probab=99.85 E-value=1.5e-21 Score=155.30 Aligned_cols=171 Identities=18% Similarity=0.229 Sum_probs=113.4
Q ss_pred CCccEEEEecCcccccchhhHHHHHHHHHHHcCCCCCHHHHHH-h-cC-CChHHHHHHHHHHhCCCCCCCHHHHHHHHHH
Q 026543 8 KPITHVIFDMDGLLLDTEKFYTEVQELILARYNKTFDWSLKAK-M-MG-KKAIEAAQVFVEETGISDKLSAEDFLVQREE 84 (237)
Q Consensus 8 ~~~~~vifD~DGTL~~~~~~~~~~~~~~~~~~g~~~~~~~~~~-~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (237)
...++|+||+||||++.. .+..+.+..|.......... . .+ .............+ . .....
T Consensus 105 ~~~~~viFD~DgTLi~~~-----~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l--~-~~~~~-------- 168 (335)
T 3n28_A 105 TKPGLIVLDMDSTAIQIE-----CIDEIAKLAGVGEEVAEVTERAMQGELDFEQSLRLRVSKL--K-DAPEQ-------- 168 (335)
T ss_dssp TSCCEEEECSSCHHHHHH-----HHHHHHHHHTCHHHHHHHHHHHHTTSSCHHHHHHHHHHTT--T-TCBTT--------
T ss_pred cCCCEEEEcCCCCCcChH-----HHHHHHHHcCCchHHHHHHHHHhcCCCCHHHHHHHHHHHh--c-CCCHH--------
Confidence 456899999999999843 44455555554322211111 1 11 11122211111111 1 01111
Q ss_pred HHHhhcCCCCCCccHHHHHHHHHhCCCCEEEEeCChhhHHHHHHhhhhhhhhhcceeeeCCC--------CCccCCCCCH
Q 026543 85 TLQTLFPTSELMPGASHLIRHLHAKGIPMCVATGSLARHFELKTQKHRELFSLMHHVVRGDD--------PEVKQGKPSP 156 (237)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~l~~l~~~g~~v~i~s~~~~~~~~~~~~~~~gl~~~f~~~~~~~~--------~~~~~~kp~~ 156 (237)
.........+++||+.++++.|+++|++++++||+.... ...+++.+|+..+|+..+...+ .....+||++
T Consensus 169 ~~~~~~~~~~~~pg~~~~l~~L~~~g~~~~ivS~~~~~~-~~~~~~~lgl~~~~~~~l~~~d~~~tg~~~~~~~~~kpk~ 247 (335)
T 3n28_A 169 ILSQVRETLPLMPELPELVATLHAFGWKVAIASGGFTYF-SDYLKEQLSLDYAQSNTLEIVSGKLTGQVLGEVVSAQTKA 247 (335)
T ss_dssp HHHHHHTTCCCCTTHHHHHHHHHHTTCEEEEEEEEEHHH-HHHHHHHHTCSEEEEEEEEEETTEEEEEEESCCCCHHHHH
T ss_pred HHHHHHHhCCcCcCHHHHHHHHHHCCCEEEEEeCCcHHH-HHHHHHHcCCCeEEeeeeEeeCCeeeeeecccccChhhhH
Confidence 112222347799999999999999999999999966544 4466788888877765431110 0345678999
Q ss_pred HHHHHHHHHcCCCCCCCCcEEEEecCHHHHHHHHHcCCeEEE
Q 026543 157 DIFLAAAKRFEGGPIDSQEILVFEDAPSGVLAAKNAGMSVVM 198 (237)
Q Consensus 157 ~~~~~~l~~~~~~~~~~~~~~~igD~~~Di~~a~~~G~~~i~ 198 (237)
..+..+++++| +++++|++|||+.||++|++.+|+.+++
T Consensus 248 ~~~~~~~~~lg---i~~~~~v~vGDs~nDi~~a~~aG~~va~ 286 (335)
T 3n28_A 248 DILLTLAQQYD---VEIHNTVAVGDGANDLVMMAAAGLGVAY 286 (335)
T ss_dssp HHHHHHHHHHT---CCGGGEEEEECSGGGHHHHHHSSEEEEE
T ss_pred HHHHHHHHHcC---CChhhEEEEeCCHHHHHHHHHCCCeEEe
Confidence 99999999999 9999999999999999999999987766
|
| >2hx1_A Predicted sugar phosphatases of the HAD superfamily; ZP_00311070.1, possible sugar phosphatase, structural genomics; HET: MSE EPE; 2.10A {Cytophaga hutchinsonii} | Back alignment and structure |
|---|
Probab=99.85 E-value=8.8e-23 Score=158.86 Aligned_cols=119 Identities=15% Similarity=0.221 Sum_probs=99.5
Q ss_pred cHHHHHHHHHhCCCCEEEEeCChhhHH-HH--HHhhhhhhhhhcceeeeCCCCCccCCCCCHHHHHHHHHHc----CCCC
Q 026543 98 GASHLIRHLHAKGIPMCVATGSLARHF-EL--KTQKHRELFSLMHHVVRGDDPEVKQGKPSPDIFLAAAKRF----EGGP 170 (237)
Q Consensus 98 ~~~~~l~~l~~~g~~v~i~s~~~~~~~-~~--~~~~~~gl~~~f~~~~~~~~~~~~~~kp~~~~~~~~l~~~----~~~~ 170 (237)
...++++.|+++|++ +|+||...... .. .++...++..+|+.+++++ ....+||+|..|..+++++ |
T Consensus 149 ~~~~l~~~L~~~g~~-~i~tn~~~~~~~~~~~~~~~~~~l~~~f~~~~~~~--~~~~~KP~p~~~~~a~~~l~~~~~--- 222 (284)
T 2hx1_A 149 DLNKTVNLLRKRTIP-AIVANTDNTYPLTKTDVAIAIGGVATMIESILGRR--FIRFGKPDSQMFMFAYDMLRQKME--- 222 (284)
T ss_dssp HHHHHHHHHHHCCCC-EEEECCCSEEECSSSCEEECHHHHHHHHHHHHCSC--EEEESTTSSHHHHHHHHHHHTTSC---
T ss_pred cHHHHHHHHhcCCCe-EEEECCCccccCcCCCccccCChHHHHHHHHhCCc--eeEecCCCHHHHHHHHHHHhhccC---
Confidence 667777789999999 99999766543 11 1235668899999999988 7888999999999999999 9
Q ss_pred CCCCcEEEEecCH-HHHHHHHHcCCeEEEEcCCCCCcc-cc-------cchhhhhhhhccc
Q 026543 171 IDSQEILVFEDAP-SGVLAAKNAGMSVVMVPDPRLDSS-YH-------SNADQLLSSLLGF 222 (237)
Q Consensus 171 ~~~~~~~~igD~~-~Di~~a~~~G~~~i~v~~~~~~~~-~~-------~~~~~~~~~~~el 222 (237)
++|++|+||||++ +|+.+|+++|+.+++|.++..... .. ..|+++++++.||
T Consensus 223 ~~~~~~~~VGD~~~~Di~~A~~aG~~~i~v~~g~~~~~~l~~~~~~~~~~pd~~~~~l~el 283 (284)
T 2hx1_A 223 ISKREILMVGDTLHTDILGGNKFGLDTALVLTGNTRIDDAETKIKSTGIVPTHICESAVIE 283 (284)
T ss_dssp CCGGGEEEEESCTTTHHHHHHHHTCEEEEESSSSSCGGGHHHHHHHHTCCCSEEESCSCCC
T ss_pred CCcceEEEECCCcHHHHHHHHHcCCeEEEECCCCCCHHHHHhhhhccCCCCCEEccchhhh
Confidence 9999999999996 999999999999999998776322 12 4689999998887
|
| >2b82_A APHA, class B acid phosphatase; DDDD acid phosphatase, metallo-ENZ hydrolase; HET: ADN; 1.25A {Escherichia coli} SCOP: c.108.1.12 PDB: 2b8j_A* 2hf7_A 1rmt_A* 1n9k_A 1rmq_A 1n8n_A* 1rmy_A* 2g1a_A* 3cz4_A 2heg_A* 1z5g_A 1z5u_A* 1z88_A 2aut_A | Back alignment and structure |
|---|
Probab=99.85 E-value=6e-22 Score=147.31 Aligned_cols=101 Identities=17% Similarity=0.135 Sum_probs=81.1
Q ss_pred CCCccHHHHHHHHHhCCCCEEEEeCChhhHHHHHHhhhhhhhhhcceeeeCCC-CCccCCCCCHHHHHHHHHHcCCCCCC
Q 026543 94 ELMPGASHLIRHLHAKGIPMCVATGSLARHFELKTQKHRELFSLMHHVVRGDD-PEVKQGKPSPDIFLAAAKRFEGGPID 172 (237)
Q Consensus 94 ~~~~~~~~~l~~l~~~g~~v~i~s~~~~~~~~~~~~~~~gl~~~f~~~~~~~~-~~~~~~kp~~~~~~~~l~~~~~~~~~ 172 (237)
.+.+++.++++.|+++|++++|+||+...... ..++. +..+|+.++.+.+ ......||+|..+..+++++| +
T Consensus 88 ~~~~~~~e~l~~L~~~G~~l~ivTn~~~~~~~-~~l~~--l~~~f~~i~~~~~~~~~~~~KP~p~~~~~~~~~~g---~- 160 (211)
T 2b82_A 88 IPKEVARQLIDMHVRRGDAIFFVTGRSPTKTE-TVSKT--LADNFHIPATNMNPVIFAGDKPGQNTKSQWLQDKN---I- 160 (211)
T ss_dssp EECHHHHHHHHHHHHHTCEEEEEECSCCCSSC-CHHHH--HHHHTTCCTTTBCCCEECCCCTTCCCSHHHHHHTT---E-
T ss_pred CCcHHHHHHHHHHHHCCCEEEEEcCCcHHHHH-HHHHH--HHHhcCccccccchhhhcCCCCCHHHHHHHHHHCC---C-
Confidence 35789999999999999999999997654332 22333 5677887743321 024457999999999999999 7
Q ss_pred CCcEEEEecCHHHHHHHHHcCCeEEEEcCCCC
Q 026543 173 SQEILVFEDAPSGVLAAKNAGMSVVMVPDPRL 204 (237)
Q Consensus 173 ~~~~~~igD~~~Di~~a~~~G~~~i~v~~~~~ 204 (237)
|+||||+.+|+++|+++|+.+++|.++..
T Consensus 161 ---~l~VGDs~~Di~aA~~aG~~~i~v~~g~~ 189 (211)
T 2b82_A 161 ---RIFYGDSDNDITAARDVGARGIRILRASN 189 (211)
T ss_dssp ---EEEEESSHHHHHHHHHTTCEEEECCCCTT
T ss_pred ---EEEEECCHHHHHHHHHCCCeEEEEecCCC
Confidence 99999999999999999999999988765
|
| >2oyc_A PLP phosphatase, pyridoxal phosphate phosphatase; structural genomics, NYSGXRC, NEW YORK SGX research center for structural genomics, PSI-2; 1.72A {Homo sapiens} PDB: 2p27_A 2p69_A* 2cft_A* 2cfs_A 2cfr_A* | Back alignment and structure |
|---|
Probab=99.85 E-value=2e-22 Score=158.42 Aligned_cols=128 Identities=18% Similarity=0.173 Sum_probs=105.7
Q ss_pred CCCCccHHHHHHHHHhCCCCEEEEeCChhhHH-HH-HHhhhhh-hhhhcceeeeCCCCCccCCCCCHHHHHHHHHHcCCC
Q 026543 93 SELMPGASHLIRHLHAKGIPMCVATGSLARHF-EL-KTQKHRE-LFSLMHHVVRGDDPEVKQGKPSPDIFLAAAKRFEGG 169 (237)
Q Consensus 93 ~~~~~~~~~~l~~l~~~g~~v~i~s~~~~~~~-~~-~~~~~~g-l~~~f~~~~~~~~~~~~~~kp~~~~~~~~l~~~~~~ 169 (237)
..+++++.++++.|+++|+ ++++||...... .. ..+...| +..+|+.+++++ ....+||++.+|..+++++|
T Consensus 155 ~~~~~~~~~~l~~l~~~g~-~~i~tn~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~--~~~~~KP~~~~~~~~~~~lg-- 229 (306)
T 2oyc_A 155 HFSFAKLREACAHLRDPEC-LLVATDRDPWHPLSDGSRTPGTGSLAAAVETASGRQ--ALVVGKPSPYMFECITENFS-- 229 (306)
T ss_dssp TCCHHHHHHHHHHHTSTTS-EEEESCCCCEEECTTSCEEECHHHHHHHHHHHHTCC--CEECSTTSTHHHHHHHHHSC--
T ss_pred CCCHHHHHHHHHHHHcCCC-EEEEEcCCccccCCCCCcCCCCcHHHHHHHHHhCCC--ceeeCCCCHHHHHHHHHHcC--
Confidence 3567899999999999888 999999765432 11 2344456 788899988888 78889999999999999999
Q ss_pred CCCCCcEEEEecCH-HHHHHHHHcCCeEEEEcCCCCCcc----------cccchhhhhhhhcccCCCC
Q 026543 170 PIDSQEILVFEDAP-SGVLAAKNAGMSVVMVPDPRLDSS----------YHSNADQLLSSLLGFNPKD 226 (237)
Q Consensus 170 ~~~~~~~~~igD~~-~Di~~a~~~G~~~i~v~~~~~~~~----------~~~~~~~~~~~~~el~~~l 226 (237)
++|++|++|||+. +|+++|+.+|+.+++|.+|..... ....|+++++++.|+...+
T Consensus 230 -i~~~e~l~vGD~~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~~~~~~~~~pd~vi~~l~el~~~l 296 (306)
T 2oyc_A 230 -IDPARTLMVGDRLETDILFGHRCGMTTVLTLTGVSRLEEAQAYLAAGQHDLVPHYYVESIADLTEGL 296 (306)
T ss_dssp -CCGGGEEEEESCTTTHHHHHHHHTCEEEEESSSSCCHHHHHHHHHTTCGGGSCSEEESSGGGGGGGC
T ss_pred -CChHHEEEECCCchHHHHHHHHCCCeEEEECCCCCCHHHHHhhhcccccCCCCCEEECCHHHHHHHH
Confidence 9999999999997 999999999999999998776321 1247899999999996654
|
| >3a1c_A Probable copper-exporting P-type ATPase A; ATP-binding, cell membrane, copper transport, hydrolase, ION transport, magnesium, membrane; HET: ACP; 1.85A {Archaeoglobus fulgidus} PDB: 3a1d_A* 3a1e_A* 2b8e_A 2voy_J 2voy_I | Back alignment and structure |
|---|
Probab=99.84 E-value=2.9e-21 Score=150.44 Aligned_cols=195 Identities=17% Similarity=0.165 Sum_probs=129.4
Q ss_pred CCccEEEEecCcccccchhhHH----------------------------HHHHHHHHHcCCCC-CHHHHHHhcCCChHH
Q 026543 8 KPITHVIFDMDGLLLDTEKFYT----------------------------EVQELILARYNKTF-DWSLKAKMMGKKAIE 58 (237)
Q Consensus 8 ~~~~~vifD~DGTL~~~~~~~~----------------------------~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~ 58 (237)
.++++|+||+||||+++...+. .++..+++++|+.. +.+.+....|.+...
T Consensus 30 ~~i~~viFD~dGTL~ds~~~~~~~~~~~~~~~~~l~~~~~~e~~s~hp~~~a~~~~~~~~g~~~~~~~~~~~~~G~~~~~ 109 (287)
T 3a1c_A 30 EKVTAVIFDKTGTLTKGKPEVTDLVPLNGDERELLRLAAIAERRSEHPIAEAIVKKALEHGIELGEPEKVEVIAGEGVVA 109 (287)
T ss_dssp HHCCEEEEECCCCCBCSCCEEEEEEESSSCHHHHHHHHHHHTTTCCSHHHHHHHHHHHHTTCCCCCCSCEEEETTTEEEE
T ss_pred hcCCEEEEeCCCCCcCCCEEEEEEEeCCCCHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcCCCccccccceeecCCCeEE
Confidence 3579999999999999988764 88888888888753 223232333332211
Q ss_pred --H---HHHHHHHhCCCCCCCHHHHHHHHHHHHHhh----------------cCCCCCCccHHHHHHHHHhCCCCEEEEe
Q 026543 59 --A---AQVFVEETGISDKLSAEDFLVQREETLQTL----------------FPTSELMPGASHLIRHLHAKGIPMCVAT 117 (237)
Q Consensus 59 --~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------~~~~~~~~~~~~~l~~l~~~g~~v~i~s 117 (237)
. ...+....+.. .+ +.+......+.... .....++||+.++|+.|+++|++++|+|
T Consensus 110 ~~~~~g~~~~~~~~~~~--~~-~~~~~~~~~~~~~g~~~i~~~~d~~~~~~~~~~~~~~~g~~~~l~~L~~~g~~~~i~T 186 (287)
T 3a1c_A 110 DGILVGNKRLMEDFGVA--VS-NEVELALEKLEREAKTAVIVARNGRVEGIIAVSDTLKESAKPAVQELKRMGIKVGMIT 186 (287)
T ss_dssp TTEEEECHHHHHHTTCC--CC-HHHHHHHHHHHHTTCEEEEEEETTEEEEEEEEECCBCTTHHHHHHHHHHTTCEEEEEC
T ss_pred EEEEECCHHHHHhcCCC--cc-HHHHHHHHHHHhCCCeEEEEEECCEEEEEEEeccccchhHHHHHHHHHHCCCeEEEEe
Confidence 0 00122222322 21 12222222222211 1235799999999999999999999999
Q ss_pred CChhhHHHHHHhhhhhhhhhcceeeeCCCCCccCCCCCHHHHHHHHHHcCCCCCCCCcEEEEecCHHHHHHHHHcCCeEE
Q 026543 118 GSLARHFELKTQKHRELFSLMHHVVRGDDPEVKQGKPSPDIFLAAAKRFEGGPIDSQEILVFEDAPSGVLAAKNAGMSVV 197 (237)
Q Consensus 118 ~~~~~~~~~~~~~~~gl~~~f~~~~~~~~~~~~~~kp~~~~~~~~l~~~~~~~~~~~~~~~igD~~~Di~~a~~~G~~~i 197 (237)
|+...... ..++.+|+..+|+.++. . .+..++++++ .. ++|++|||+.+|+++|+.+|+. +
T Consensus 187 ~~~~~~~~-~~l~~~gl~~~f~~i~~---------~----~K~~~~~~l~---~~-~~~~~vGDs~~Di~~a~~ag~~-v 247 (287)
T 3a1c_A 187 GDNWRSAE-AISRELNLDLVIAEVLP---------H----QKSEEVKKLQ---AK-EVVAFVGDGINDAPALAQADLG-I 247 (287)
T ss_dssp SSCHHHHH-HHHHHHTCSEEECSCCT---------T----CHHHHHHHHT---TT-CCEEEEECTTTCHHHHHHSSEE-E
T ss_pred CCCHHHHH-HHHHHhCCceeeeecCh---------H----HHHHHHHHHh---cC-CeEEEEECCHHHHHHHHHCCee-E
Confidence 97665444 56777888777765541 1 1267889999 88 9999999999999999999987 4
Q ss_pred EEcCCCCCcccccchhhhh--hhhcccCCCC
Q 026543 198 MVPDPRLDSSYHSNADQLL--SSLLGFNPKD 226 (237)
Q Consensus 198 ~v~~~~~~~~~~~~~~~~~--~~~~el~~~l 226 (237)
.+. +..+.....+++++ +++.++...+
T Consensus 248 ~~~--~~~~~~~~~ad~v~~~~~~~~l~~~l 276 (287)
T 3a1c_A 248 AVG--SGSDVAVESGDIVLIRDDLRDVVAAI 276 (287)
T ss_dssp EEC--CCSCCSSCCSSEEESSSCTHHHHHHH
T ss_pred EeC--CCCHHHHhhCCEEEeCCCHHHHHHHH
Confidence 443 33333355788888 8888875443
|
| >1qyi_A ZR25, hypothetical protein; structural genomics, PSI, protein structure initiative, NORT structural genomics consortium, NESG; 2.50A {Staphylococcus aureus subsp} SCOP: c.108.1.13 | Back alignment and structure |
|---|
Probab=99.84 E-value=2.4e-22 Score=160.96 Aligned_cols=200 Identities=14% Similarity=0.101 Sum_probs=139.5
Q ss_pred cCcccccchhhHHHHHHHHHHH-cCCCCCHHHHHHhcCCChHHHHHHHHHHhCCCCCCCHHHHHHHHH-----HHHHhh-
Q 026543 17 MDGLLLDTEKFYTEVQELILAR-YNKTFDWSLKAKMMGKKAIEAAQVFVEETGISDKLSAEDFLVQRE-----ETLQTL- 89 (237)
Q Consensus 17 ~DGTL~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~- 89 (237)
+|||..... .+...|.++..+ .++.. +......|.+.....+.+.+.++.. ........ ......
T Consensus 137 fD~t~~~~d-~i~~~l~~~a~~~~~i~~--~~~~~~~G~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~ 208 (384)
T 1qyi_A 137 LDNVKVGKN-NIYAALEEFATTELHVSD--ATLFSLKGALWTLAQEVYQEWYLGS-----KLYEDVEKKIARTTFKTGYI 208 (384)
T ss_dssp HTTCCSSHH-HHHHHHHHHHHHHTTCSC--CGGGSTTCHHHHHHHHHHHHHHHHH-----HHHHHHHCSCCSCSSCCCTT
T ss_pred hcCCCccHH-HHHHHHHHHHHHhCCCCH--HHHHHhcCCCHHHHHHHHHHHcCCc-----cCHHHHHhHHHHHHHHHHHH
Confidence 367765433 356666666654 36543 3334566766666666666654321 00000000 000000
Q ss_pred --cCCCCCCccHHHHHHHHHhCCCCEEEEeCChhhHHHHHHhhhhhhhhhcc--eeeeCCCCCcc-----------CCCC
Q 026543 90 --FPTSELMPGASHLIRHLHAKGIPMCVATGSLARHFELKTQKHRELFSLMH--HVVRGDDPEVK-----------QGKP 154 (237)
Q Consensus 90 --~~~~~~~~~~~~~l~~l~~~g~~v~i~s~~~~~~~~~~~~~~~gl~~~f~--~~~~~~~~~~~-----------~~kp 154 (237)
.....++||+.++|+.|+++|++++|+||+....+. ..++.+|+..+|+ .+++++ +.. .+||
T Consensus 209 ~~~~~~~l~pGv~elL~~Lk~~Gi~laIvTn~~~~~~~-~~L~~lgL~~~Fd~~~Ivs~d--dv~~~~~~~~~~kp~~KP 285 (384)
T 1qyi_A 209 YQEIILRPVDEVKVLLNDLKGAGFELGIATGRPYTETV-VPFENLGLLPYFEADFIATAS--DVLEAENMYPQARPLGKP 285 (384)
T ss_dssp TTCCBSSCHHHHHHHHHHHHHTTCEEEEECSSCHHHHH-HHHHHHTCGGGSCGGGEECHH--HHHHHHHHSTTSCCCCTT
T ss_pred hhccCCCcCcCHHHHHHHHHhCCCEEEEEeCCcHHHHH-HHHHHcCChHhcCCCEEEecc--cccccccccccccCCCCC
Confidence 123578999999999999999999999997766555 4577889999999 788877 543 3899
Q ss_pred CHHHHHHHHHHcCC-----------CCCCCCcEEEEecCHHHHHHHHHcCCeEEEEcCCCCC-----cccccchhhhhhh
Q 026543 155 SPDIFLAAAKRFEG-----------GPIDSQEILVFEDAPSGVLAAKNAGMSVVMVPDPRLD-----SSYHSNADQLLSS 218 (237)
Q Consensus 155 ~~~~~~~~l~~~~~-----------~~~~~~~~~~igD~~~Di~~a~~~G~~~i~v~~~~~~-----~~~~~~~~~~~~~ 218 (237)
+|..|..++++++. ..++|++|++|||+.+|+.+|+++|+.+|+|.++... ......+++++++
T Consensus 286 ~P~~~~~a~~~lg~~~~~~~~~~~~~~v~p~e~l~VGDs~~Di~aAk~AG~~~I~V~~g~~~~~~~~~l~~~~ad~vi~s 365 (384)
T 1qyi_A 286 NPFSYIAALYGNNRDKYESYINKQDNIVNKDDVFIVGDSLADLLSAQKIGATFIGTLTGLKGKDAAGELEAHHADYVINH 365 (384)
T ss_dssp STHHHHHHHHCCCGGGHHHHHHCCTTCSCTTTEEEEESSHHHHHHHHHHTCEEEEESCBTTBGGGHHHHHHTTCSEEESS
T ss_pred CHHHHHHHHHHcCCccccccccccccCCCCcCeEEEcCCHHHHHHHHHcCCEEEEECCCccccccHHHHhhcCCCEEECC
Confidence 99999999999861 1157999999999999999999999999999987642 1123478999999
Q ss_pred hcccCCCCC
Q 026543 219 LLGFNPKDW 227 (237)
Q Consensus 219 ~~el~~~l~ 227 (237)
+.|+...+.
T Consensus 366 l~eL~~~l~ 374 (384)
T 1qyi_A 366 LGELRGVLD 374 (384)
T ss_dssp GGGHHHHHS
T ss_pred HHHHHHHHH
Confidence 999866543
|
| >1zjj_A Hypothetical protein PH1952; alpha/beta hydrolase fold, HAD superfamily, structural genom riken structural genomics/proteomics initiative; 1.85A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=99.84 E-value=7.6e-22 Score=151.90 Aligned_cols=126 Identities=13% Similarity=0.112 Sum_probs=101.8
Q ss_pred CCCCccHHHHHHHHHhCCCCEEEEeCChhhHHH-HHHhhh-hhhhhhcceeeeCCCCCccCCCCCHHHHHHHHHHcCCCC
Q 026543 93 SELMPGASHLIRHLHAKGIPMCVATGSLARHFE-LKTQKH-RELFSLMHHVVRGDDPEVKQGKPSPDIFLAAAKRFEGGP 170 (237)
Q Consensus 93 ~~~~~~~~~~l~~l~~~g~~v~i~s~~~~~~~~-~~~~~~-~gl~~~f~~~~~~~~~~~~~~kp~~~~~~~~l~~~~~~~ 170 (237)
..+++++.++++.|+ +|+++ ++||....... ...+.. .++..+|+.+++++ ....+||++..|+.++++
T Consensus 129 ~~~~~~~~~~l~~L~-~g~~~-i~tn~~~~~~~~~~~l~~~~~l~~~~~~~~~~~--~~~~~KP~~~~~~~~~~~----- 199 (263)
T 1zjj_A 129 DLTYEKLKYATLAIR-NGATF-IGTNPDATLPGEEGIYPGAGSIIAALKVATNVE--PIIIGKPNEPMYEVVREM----- 199 (263)
T ss_dssp TCBHHHHHHHHHHHH-TTCEE-EESCCCSEEEETTEEEECHHHHHHHHHHHHCCC--CEECSTTSHHHHHHHHHH-----
T ss_pred CCCHHHHHHHHHHHH-CCCEE-EEECCCccccCCCCCcCCcHHHHHHHHHHhCCC--ccEecCCCHHHHHHHHHh-----
Confidence 467899999999999 78888 99997654320 122333 67888999999888 778899999999999998
Q ss_pred CCCCcEEEEecCH-HHHHHHHHcCCeEEEEcCCCCCcc-cc---cchhhhhhhhcccCCCCC
Q 026543 171 IDSQEILVFEDAP-SGVLAAKNAGMSVVMVPDPRLDSS-YH---SNADQLLSSLLGFNPKDW 227 (237)
Q Consensus 171 ~~~~~~~~igD~~-~Di~~a~~~G~~~i~v~~~~~~~~-~~---~~~~~~~~~~~el~~~l~ 227 (237)
++|++++||||+. +|+.+|+++|+.+++|.++..... .. ..++++++++.|+...+.
T Consensus 200 ~~~~~~~~VGD~~~~Di~~A~~aG~~~i~v~~g~~~~~~~~~~~~~p~~~~~~l~el~~~l~ 261 (263)
T 1zjj_A 200 FPGEELWMVGDRLDTDIAFAKKFGMKAIMVLTGVSSLEDIKKSEYKPDLVLPSVYELIDYLK 261 (263)
T ss_dssp STTCEEEEEESCTTTHHHHHHHTTCEEEEESSSSCCHHHHTTCSSCCSEEESSGGGGGGGGC
T ss_pred CCcccEEEECCChHHHHHHHHHcCCeEEEECCCCCChHHHHhcCCCCCEEECCHHHHHHHHh
Confidence 3689999999996 999999999999999998766321 11 268999999999977654
|
| >3epr_A Hydrolase, haloacid dehalogenase-like family; structural genomics, unknown function, HAD superfamily hydro PSI-2; 1.55A {Streptococcus agalactiae serogroup V} SCOP: c.108.1.14 PDB: 1ys9_A 1wvi_A 1ydf_A | Back alignment and structure |
|---|
Probab=99.83 E-value=7.8e-21 Score=146.31 Aligned_cols=87 Identities=20% Similarity=0.214 Sum_probs=74.8
Q ss_pred hhhhhcceeeeCCCCCccCCCCCHHHHHHHHHHcCCCCCCCCcEEEEecC-HHHHHHHHHcCCeEEEEcCCCCCccc-c-
Q 026543 133 ELFSLMHHVVRGDDPEVKQGKPSPDIFLAAAKRFEGGPIDSQEILVFEDA-PSGVLAAKNAGMSVVMVPDPRLDSSY-H- 209 (237)
Q Consensus 133 gl~~~f~~~~~~~~~~~~~~kp~~~~~~~~l~~~~~~~~~~~~~~~igD~-~~Di~~a~~~G~~~i~v~~~~~~~~~-~- 209 (237)
++..+|+.+++.+ ....+||++..+..+++++| ++|+++++|||+ .+|+++|+.+|+.+++|.+|...... .
T Consensus 164 ~~~~~~~~~~~~~--~~~~~Kp~~~~~~~~~~~~~---~~~~~~~~vGD~~~~Di~~a~~aG~~~~~v~~g~~~~~~~~~ 238 (264)
T 3epr_A 164 SLNALLEAATRIK--PVFIGKPNAIIMNKALEILN---IPRNQAVMVGDNYLTDIMAGINNDIDTLLVTTGFTTVEEVPD 238 (264)
T ss_dssp HHHHHHHHHHSCC--CEECSTTSHHHHHHHHHHHT---SCGGGEEEEESCTTTHHHHHHHHTCEEEEETTSSSCGGGGGG
T ss_pred HHHHHHHHHhCCC--cccCCCCCHHHHHHHHHHhC---cCcccEEEECCCcHHHHHHHHHCCCeEEEECCCCCChHHHHh
Confidence 4566777777777 78889999999999999999 999999999999 59999999999999999998764332 2
Q ss_pred --cchhhhhhhhcccCC
Q 026543 210 --SNADQLLSSLLGFNP 224 (237)
Q Consensus 210 --~~~~~~~~~~~el~~ 224 (237)
..|+++++++.||..
T Consensus 239 ~~~~pd~~~~~l~~l~~ 255 (264)
T 3epr_A 239 LPIQPSYVLASLDEWTF 255 (264)
T ss_dssp CSSCCSEEESCGGGCCS
T ss_pred cCCCCCEEECCHHHHhc
Confidence 279999999999854
|
| >2p9j_A Hypothetical protein AQ2171; secsg, riken, PSI, structural GENO protein structure initiative, southeast collaboratory for S genomics; 2.40A {Aquifex aeolicus} | Back alignment and structure |
|---|
Probab=99.82 E-value=1.7e-21 Score=139.20 Aligned_cols=109 Identities=15% Similarity=0.140 Sum_probs=83.8
Q ss_pred CCccHHHHHHHHHhCCCCEEEEeCChhhHHHHHHhhhhhhhhhcceeeeCCCCCccCCCCCHHHHHHHHHHcCCCCCCCC
Q 026543 95 LMPGASHLIRHLHAKGIPMCVATGSLARHFELKTQKHRELFSLMHHVVRGDDPEVKQGKPSPDIFLAAAKRFEGGPIDSQ 174 (237)
Q Consensus 95 ~~~~~~~~l~~l~~~g~~v~i~s~~~~~~~~~~~~~~~gl~~~f~~~~~~~~~~~~~~kp~~~~~~~~l~~~~~~~~~~~ 174 (237)
+.++..++++.|+++|++++++||+...... ..++.+|+..+|+. .||++..+..++++++ ++|+
T Consensus 37 ~~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~-~~l~~~gl~~~~~~-----------~kp~~~~~~~~~~~~~---~~~~ 101 (162)
T 2p9j_A 37 FNVLDGIGIKLLQKMGITLAVISGRDSAPLI-TRLKELGVEEIYTG-----------SYKKLEIYEKIKEKYS---LKDE 101 (162)
T ss_dssp EEHHHHHHHHHHHTTTCEEEEEESCCCHHHH-HHHHHTTCCEEEEC-----------C--CHHHHHHHHHHTT---CCGG
T ss_pred ecccHHHHHHHHHHCCCEEEEEeCCCcHHHH-HHHHHcCCHhhccC-----------CCCCHHHHHHHHHHcC---CCHH
Confidence 3455689999999999999999997766554 46777777554432 5899999999999999 9999
Q ss_pred cEEEEecCHHHHHHHHHcCCeEEEEcCCCCCcccccchhhhhhhhcc
Q 026543 175 EILVFEDAPSGVLAAKNAGMSVVMVPDPRLDSSYHSNADQLLSSLLG 221 (237)
Q Consensus 175 ~~~~igD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~~~~e 221 (237)
++++|||+.+|+++|+.+|+.+++. . ..+.....++++++++.+
T Consensus 102 ~~~~vGD~~~Di~~a~~ag~~~~~~-~--~~~~~~~~a~~v~~~~~~ 145 (162)
T 2p9j_A 102 EIGFIGDDVVDIEVMKKVGFPVAVR-N--AVEEVRKVAVYITQRNGG 145 (162)
T ss_dssp GEEEEECSGGGHHHHHHSSEEEECT-T--SCHHHHHHCSEECSSCSS
T ss_pred HEEEECCCHHHHHHHHHCCCeEEec-C--ccHHHHhhCCEEecCCCC
Confidence 9999999999999999999986643 2 233334567777777665
|
| >3mmz_A Putative HAD family hydrolase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.84A {Streptomyces avermitilis} | Back alignment and structure |
|---|
Probab=99.82 E-value=1.9e-22 Score=145.95 Aligned_cols=98 Identities=11% Similarity=0.088 Sum_probs=78.0
Q ss_pred HHHHHHhCCCCEEEEeCChhhHHHHHHhhhhhhhhhcceeeeCCCCCccCCCCCHHHHHHHHHHcCCCCCCCCcEEEEec
Q 026543 102 LIRHLHAKGIPMCVATGSLARHFELKTQKHRELFSLMHHVVRGDDPEVKQGKPSPDIFLAAAKRFEGGPIDSQEILVFED 181 (237)
Q Consensus 102 ~l~~l~~~g~~v~i~s~~~~~~~~~~~~~~~gl~~~f~~~~~~~~~~~~~~kp~~~~~~~~l~~~~~~~~~~~~~~~igD 181 (237)
+|+.|+++|++++|+|+....... .+++.+|+. ++.+ .||++..+..++++++ ++++++++|||
T Consensus 47 ~l~~L~~~g~~~~i~T~~~~~~~~-~~~~~lgi~-----~~~~-------~~~k~~~l~~~~~~~~---~~~~~~~~vGD 110 (176)
T 3mmz_A 47 GIAALRKSGLTMLILSTEQNPVVA-ARARKLKIP-----VLHG-------IDRKDLALKQWCEEQG---IAPERVLYVGN 110 (176)
T ss_dssp HHHHHHHTTCEEEEEESSCCHHHH-HHHHHHTCC-----EEES-------CSCHHHHHHHHHHHHT---CCGGGEEEEEC
T ss_pred HHHHHHHCCCeEEEEECcChHHHH-HHHHHcCCe-----eEeC-------CCChHHHHHHHHHHcC---CCHHHEEEEcC
Confidence 889999999999999997665544 567777764 3322 2889999999999999 99999999999
Q ss_pred CHHHHHHHHHcCCeEEEEcCCCCCcccccchhhhhhh
Q 026543 182 APSGVLAAKNAGMSVVMVPDPRLDSSYHSNADQLLSS 218 (237)
Q Consensus 182 ~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~~ 218 (237)
+.||+++++.+|+.+ ..++..+.....+++++.+
T Consensus 111 ~~nD~~~~~~ag~~v---~~~~~~~~~~~~ad~v~~~ 144 (176)
T 3mmz_A 111 DVNDLPCFALVGWPV---AVASAHDVVRGAARAVTTV 144 (176)
T ss_dssp SGGGHHHHHHSSEEE---ECTTCCHHHHHHSSEECSS
T ss_pred CHHHHHHHHHCCCeE---ECCChhHHHHHhCCEEecC
Confidence 999999999999553 3444444445667777776
|
| >3pdw_A Uncharacterized hydrolase YUTF; structural genomics, PSI2, NYSGXRC, protein structure initia YORK SGX research center for structural genomics; 1.60A {Bacillus subtilis} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.82 E-value=6.5e-20 Score=141.27 Aligned_cols=122 Identities=18% Similarity=0.146 Sum_probs=86.2
Q ss_pred CCccHHHHHHHHHhCCCCEEEEeCChhhHHH--HHHhhhhhhhhhcceeeeCCCCCccCCCCCHHHHHHHHHHcCCCCCC
Q 026543 95 LMPGASHLIRHLHAKGIPMCVATGSLARHFE--LKTQKHRELFSLMHHVVRGDDPEVKQGKPSPDIFLAAAKRFEGGPID 172 (237)
Q Consensus 95 ~~~~~~~~l~~l~~~g~~v~i~s~~~~~~~~--~~~~~~~gl~~~f~~~~~~~~~~~~~~kp~~~~~~~~l~~~~~~~~~ 172 (237)
.++++.+.+..++. +. ..++||....... .......++..+|+.+++.+ ....+||++.++..+++++| ++
T Consensus 127 ~~~~~~~~~~~l~~-~~-~~i~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~kp~~~~~~~~~~~lg---i~ 199 (266)
T 3pdw_A 127 TYEKFAVGCLAIRN-GA-RFISTNGDIAIPTERGLLPGNGSLTSVLTVSTGVQ--PVFIGKPESIIMEQAMRVLG---TD 199 (266)
T ss_dssp CHHHHHHHHHHHHT-TC-EEEESCCCCEEEETTEEEECHHHHHHHHHHHHCCC--CEECSTTSSHHHHHHHHHHT---CC
T ss_pred CHHHHHHHHHHHHC-CC-eEEEEcCCceeECCCceEecchHHHHHHHHHhCCC--ccccCCCCHHHHHHHHHHcC---CC
Confidence 34555555555554 33 4455654322110 00112234566777777777 77889999999999999999 99
Q ss_pred CCcEEEEecC-HHHHHHHHHcCCeEEEEcCCCCCcc-ccc---chhhhhhhhcccC
Q 026543 173 SQEILVFEDA-PSGVLAAKNAGMSVVMVPDPRLDSS-YHS---NADQLLSSLLGFN 223 (237)
Q Consensus 173 ~~~~~~igD~-~~Di~~a~~~G~~~i~v~~~~~~~~-~~~---~~~~~~~~~~el~ 223 (237)
++++++|||+ .||+++|+.+|+.+++|.+|..... .+. .|+++++++.||.
T Consensus 200 ~~~~~~iGD~~~~Di~~~~~aG~~~~~v~~g~~~~~~~~~~~~~~d~v~~~~~el~ 255 (266)
T 3pdw_A 200 VSETLMVGDNYATDIMAGINAGMDTLLVHTGVTKREHMTDDMEKPTHAIDSLTEWI 255 (266)
T ss_dssp GGGEEEEESCTTTHHHHHHHHTCEEEEECCC------CCTTSCCCSEEESSGGGGH
T ss_pred hhhEEEECCCcHHHHHHHHHCCCeEEEECCCCCChHHHHhcCCCCCEEeCCHHHHH
Confidence 9999999999 6999999999999999998876322 233 6999999999984
|
| >3skx_A Copper-exporting P-type ATPase B; P1B-ATPase, ATP binding domain, copper(II) transporter, MEMB protein, hydrolase; 1.59A {Archaeoglobus fulgidus} PDB: 3sky_A* | Back alignment and structure |
|---|
Probab=99.82 E-value=7e-22 Score=153.14 Aligned_cols=190 Identities=17% Similarity=0.103 Sum_probs=122.6
Q ss_pred CCCccEEEEecCccccc----------------------------chhhHHHHHHHHHHHcCCCCCH-HHHHHhcCCChH
Q 026543 7 KKPITHVIFDMDGLLLD----------------------------TEKFYTEVQELILARYNKTFDW-SLKAKMMGKKAI 57 (237)
Q Consensus 7 ~~~~~~vifD~DGTL~~----------------------------~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~ 57 (237)
++++++|+||+||||++ +...+..++.+.++++|..... +.+....+.+..
T Consensus 10 ~~~ik~i~FD~DGTL~d~~~~v~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~a~~~~~~~~g~~~~~~~~~~~~~g~~~~ 89 (280)
T 3skx_A 10 AKDLQAVIFDKTGTLTEGRFGVTDIVGFNHSEDELLQIAASLEARSEHPIAAAIVEEAEKRGFGLTEVEEFRAIPGKGVE 89 (280)
T ss_dssp GGGCCEEEEECCCCCEEEEEEEEEEEESSSCHHHHHHHHHHHHTTCCSHHHHHHHHHHHHTTCCCCCCEEEEEETTTEEE
T ss_pred hcCCCEEEEeCCCcCCCCcEEEEEEEecCCCHHHHHHHHHHhhccCCCHHHHHHHHHHHhcCCCCCCccceeecCCCEEE
Confidence 56789999999999999 8888888999999988875321 212222222111
Q ss_pred HH---------HHHHHHHhCCCCCCCHHHHHHHHHHHHHhhcCC----------------CCCCccHHHHHHHHHhCCCC
Q 026543 58 EA---------AQVFVEETGISDKLSAEDFLVQREETLQTLFPT----------------SELMPGASHLIRHLHAKGIP 112 (237)
Q Consensus 58 ~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------~~~~~~~~~~l~~l~~~g~~ 112 (237)
.. ...+....+.. .. .... ......... ..++||+.++++.|+++|++
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~--~~-~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~ 162 (280)
T 3skx_A 90 GIVNGRRYMVVSPGYIRELGIK--TD-ESVE----KLKQQGKTVVFILKNGEVSGVIALADRIRPESREAISKLKAIGIK 162 (280)
T ss_dssp EEETTEEEEEECHHHHHHTTCC--CC-TTHH----HHHTTTCEEEEEEETTEEEEEEEEEEEECTTHHHHHHHHHHTTCE
T ss_pred EEECCEEEEEecHHHHHHcCCC--ch-HHHH----HHHhCCCeEEEEEECCEEEEEEEecCCCCHhHHHHHHHHHHCCCE
Confidence 00 02333444443 11 1111 111111100 16889999999999999999
Q ss_pred EEEEeCChhhHHHHHHhhhhhhhhhcceeeeCCCCCccCCCCCHHHHHHHHHHcCCCCCCCCcEEEEecCHHHHHHHHHc
Q 026543 113 MCVATGSLARHFELKTQKHRELFSLMHHVVRGDDPEVKQGKPSPDIFLAAAKRFEGGPIDSQEILVFEDAPSGVLAAKNA 192 (237)
Q Consensus 113 v~i~s~~~~~~~~~~~~~~~gl~~~f~~~~~~~~~~~~~~kp~~~~~~~~l~~~~~~~~~~~~~~~igD~~~Di~~a~~~ 192 (237)
++++||....... ..++.+|+..+|+.+++++ . ........+ +.++++|||+.||++|++.+
T Consensus 163 ~~i~T~~~~~~~~-~~~~~~gl~~~f~~~~~~~--k-------~~~~k~~~~--------~~~~~~vGD~~nDi~~~~~A 224 (280)
T 3skx_A 163 CMMLTGDNRFVAK-WVAEELGLDDYFAEVLPHE--K-------AEKVKEVQQ--------KYVTAMVGDGVNDAPALAQA 224 (280)
T ss_dssp EEEECSSCHHHHH-HHHHHHTCSEEECSCCGGG--H-------HHHHHHHHT--------TSCEEEEECTTTTHHHHHHS
T ss_pred EEEEeCCCHHHHH-HHHHHcCChhHhHhcCHHH--H-------HHHHHHHHh--------cCCEEEEeCCchhHHHHHhC
Confidence 9999997665544 5688889988888887665 1 222222222 22789999999999999999
Q ss_pred CCeEEEEcCCCCCcccccchhhhh--hhhcccCC
Q 026543 193 GMSVVMVPDPRLDSSYHSNADQLL--SSLLGFNP 224 (237)
Q Consensus 193 G~~~i~v~~~~~~~~~~~~~~~~~--~~~~el~~ 224 (237)
| ++|.+++..+.....++.++ +++.++..
T Consensus 225 g---~~va~~~~~~~~~~~a~~~~~~~~~~~l~~ 255 (280)
T 3skx_A 225 D---VGIAIGAGTDVAVETADIVLVRNDPRDVAA 255 (280)
T ss_dssp S---EEEECSCCSSSCCCSSSEECSSCCTHHHHH
T ss_pred C---ceEEecCCcHHHHhhCCEEEeCCCHHHHHH
Confidence 9 46666666544455566555 77776643
|
| >2yj3_A Copper-transporting ATPase; hydrolase, P-type ATPase, COPB, heavy metal translocation; 2.20A {Sulfolobus solfataricus} PDB: 2iye_A 2yj6_A* 2yj5_A* 2yj4_A* | Back alignment and structure |
|---|
Probab=99.70 E-value=1.5e-21 Score=150.13 Aligned_cols=115 Identities=13% Similarity=0.150 Sum_probs=92.2
Q ss_pred CCCCCccHHHHHHHHHhCCCCEEEEeCChhhHHHHHHhhhhhhhhhcceeeeCCCCCccCCCCCHHHHHHHHHHcCCCCC
Q 026543 92 TSELMPGASHLIRHLHAKGIPMCVATGSLARHFELKTQKHRELFSLMHHVVRGDDPEVKQGKPSPDIFLAAAKRFEGGPI 171 (237)
Q Consensus 92 ~~~~~~~~~~~l~~l~~~g~~v~i~s~~~~~~~~~~~~~~~gl~~~f~~~~~~~~~~~~~~kp~~~~~~~~l~~~~~~~~ 171 (237)
..+++||+.++++.|+++|++++++||..... ...+++.+|+..+|+.++ |..+..++++++ .
T Consensus 134 ~~~~~~g~~~~l~~L~~~g~~~~i~T~~~~~~-~~~~~~~~gl~~~f~~~~-------------p~~k~~~~~~l~---~ 196 (263)
T 2yj3_A 134 SDVPRPNLKDYLEKLKNEGLKIIILSGDKEDK-VKELSKELNIQEYYSNLS-------------PEDKVRIIEKLK---Q 196 (263)
Confidence 46799999999999999999999999965554 445678888888887665 223567899999 9
Q ss_pred CCCcEEEEecCHHHHHHHHHcCCeEEEEcCCCCCcccccchhhhh--hhhcccCCCC
Q 026543 172 DSQEILVFEDAPSGVLAAKNAGMSVVMVPDPRLDSSYHSNADQLL--SSLLGFNPKD 226 (237)
Q Consensus 172 ~~~~~~~igD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~--~~~~el~~~l 226 (237)
++++|+||||+.||+++++.+|+. +.++.........+++++ +++.++...+
T Consensus 197 ~~~~~~~VGD~~~D~~aa~~Agv~---va~g~~~~~~~~~ad~v~~~~~l~~l~~~l 250 (263)
T 2yj3_A 197 NGNKVLMIGDGVNDAAALALADVS---VAMGNGVDISKNVADIILVSNDIGTLLGLI 250 (263)
Confidence 999999999999999999999954 444444444456789999 9999986554
|
| >3qgm_A P-nitrophenyl phosphatase (PHO2); structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 2.00A {Archaeoglobus fulgidus} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.81 E-value=1.5e-20 Score=144.93 Aligned_cols=85 Identities=22% Similarity=0.243 Sum_probs=70.6
Q ss_pred hcceeeeCCCCC-ccCCCCCHHHHHHHHHHcCCCCCCCCcEEEEecC-HHHHHHHHHcCCeEEEEcCCCCCccccc----
Q 026543 137 LMHHVVRGDDPE-VKQGKPSPDIFLAAAKRFEGGPIDSQEILVFEDA-PSGVLAAKNAGMSVVMVPDPRLDSSYHS---- 210 (237)
Q Consensus 137 ~f~~~~~~~~~~-~~~~kp~~~~~~~~l~~~~~~~~~~~~~~~igD~-~~Di~~a~~~G~~~i~v~~~~~~~~~~~---- 210 (237)
.++.+...+ . ...+||++..+..+++++| ++++++++|||+ .+|+++|+.+|+.+++|.+|........
T Consensus 172 ~~~~~~~~~--~~~~~~kp~~~~~~~~~~~~~---~~~~~~~~vGD~~~~Di~~~~~~g~~~~~v~~g~~~~~~~~~~~~ 246 (268)
T 3qgm_A 172 ALYWMTGRE--PDVVVGKPSEVIMREALDILG---LDAKDVAVVGDQIDVDVAAGKAIGAETVLVLTGVTTRENLDQMIE 246 (268)
T ss_dssp HHHHHHSCC--CSEECSTTSHHHHHHHHHHHT---CCGGGEEEEESCTTTHHHHHHHHTCEEEEESSSSCCTTTHHHHHH
T ss_pred HHHHHhCCC--cceecCCCCHHHHHHHHHHhC---CCchhEEEECCCchHHHHHHHHCCCcEEEECCCCCCHHHHHhhcc
Confidence 344444444 4 6789999999999999999 999999999999 4999999999999999999887543322
Q ss_pred ----chhhhhhhhcccCCCC
Q 026543 211 ----NADQLLSSLLGFNPKD 226 (237)
Q Consensus 211 ----~~~~~~~~~~el~~~l 226 (237)
.|+++++++.||...+
T Consensus 247 ~~~~~~d~v~~~~~el~~~l 266 (268)
T 3qgm_A 247 RHGLKPDYVFNSLKDMVEAL 266 (268)
T ss_dssp HHTCCCSEEESSHHHHHHTC
T ss_pred ccCCCCCEEECCHHHHHHHH
Confidence 7899999999986654
|
| >3e8m_A Acylneuraminate cytidylyltransferase; 2-keto-3-deoxynononic acid 9-phosphate phosphohydrolase, nucleotidyltransferase; HET: PEG PG4 EDO PGE; 1.10A {Bacteroides thetaiotaomicron} PDB: 3e84_A 3e81_A* | Back alignment and structure |
|---|
Probab=99.81 E-value=3.6e-20 Score=132.51 Aligned_cols=99 Identities=15% Similarity=0.124 Sum_probs=78.2
Q ss_pred HHHHHHhCCCCEEEEeCChhhHHHHHHhhhhhhhhhcceeeeCCCCCccCCCCCHHHHHHHHHHcCCCCCCCCcEEEEec
Q 026543 102 LIRHLHAKGIPMCVATGSLARHFELKTQKHRELFSLMHHVVRGDDPEVKQGKPSPDIFLAAAKRFEGGPIDSQEILVFED 181 (237)
Q Consensus 102 ~l~~l~~~g~~v~i~s~~~~~~~~~~~~~~~gl~~~f~~~~~~~~~~~~~~kp~~~~~~~~l~~~~~~~~~~~~~~~igD 181 (237)
+++.|+++|++++++||+...... ..++.+|+..+|+. .||++..+..++++++ ++|++++||||
T Consensus 39 ~l~~l~~~g~~~~i~T~~~~~~~~-~~~~~~gl~~~~~~-----------~kpk~~~~~~~~~~~~---~~~~~~~~vGD 103 (164)
T 3e8m_A 39 GIFWAHNKGIPVGILTGEKTEIVR-RRAEKLKVDYLFQG-----------VVDKLSAAEELCNELG---INLEQVAYIGD 103 (164)
T ss_dssp HHHHHHHTTCCEEEECSSCCHHHH-HHHHHTTCSEEECS-----------CSCHHHHHHHHHHHHT---CCGGGEEEECC
T ss_pred HHHHHHHCCCEEEEEeCCChHHHH-HHHHHcCCCEeecc-----------cCChHHHHHHHHHHcC---CCHHHEEEECC
Confidence 789999999999999997665544 56777776544432 3899999999999999 99999999999
Q ss_pred CHHHHHHHHHcCCeEEEEcCCCCCcccccchhhhhhh
Q 026543 182 APSGVLAAKNAGMSVVMVPDPRLDSSYHSNADQLLSS 218 (237)
Q Consensus 182 ~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~~ 218 (237)
+.+|+++|+.+|+.+++ ++..+.....+++++.+
T Consensus 104 ~~~Di~~~~~ag~~~~~---~~~~~~~~~~ad~v~~~ 137 (164)
T 3e8m_A 104 DLNDAKLLKRVGIAGVP---ASAPFYIRRLSTIFLEK 137 (164)
T ss_dssp SGGGHHHHTTSSEEECC---TTSCHHHHTTCSSCCCC
T ss_pred CHHHHHHHHHCCCeEEc---CChHHHHHHhCcEEecc
Confidence 99999999999976554 33444445566777666
|
| >3ij5_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; IDP022 hydrolase, lipopolysaccharide biosynthesis, magnesium, STRU genomics; 1.95A {Yersinia pestis} | Back alignment and structure |
|---|
Probab=99.80 E-value=1.2e-19 Score=134.62 Aligned_cols=100 Identities=14% Similarity=0.111 Sum_probs=79.2
Q ss_pred HHHHHHhCCCCEEEEeCChhhHHHHHHhhhhhhhhhcceeeeCCCCCccCCCCCHHHHHHHHHHcCCCCCCCCcEEEEec
Q 026543 102 LIRHLHAKGIPMCVATGSLARHFELKTQKHRELFSLMHHVVRGDDPEVKQGKPSPDIFLAAAKRFEGGPIDSQEILVFED 181 (237)
Q Consensus 102 ~l~~l~~~g~~v~i~s~~~~~~~~~~~~~~~gl~~~f~~~~~~~~~~~~~~kp~~~~~~~~l~~~~~~~~~~~~~~~igD 181 (237)
+|+.|+++|++++|+|+....... .+++.+|+..+|+.+ ||++..+..+++++| +++++|++|||
T Consensus 84 ~L~~L~~~G~~l~I~T~~~~~~~~-~~l~~lgi~~~f~~~-----------k~K~~~l~~~~~~lg---~~~~~~~~vGD 148 (211)
T 3ij5_A 84 GIRCLITSDIDVAIITGRRAKLLE-DRANTLGITHLYQGQ-----------SDKLVAYHELLATLQ---CQPEQVAYIGD 148 (211)
T ss_dssp HHHHHHHTTCEEEEECSSCCHHHH-HHHHHHTCCEEECSC-----------SSHHHHHHHHHHHHT---CCGGGEEEEEC
T ss_pred HHHHHHHCCCEEEEEeCCCHHHHH-HHHHHcCCchhhccc-----------CChHHHHHHHHHHcC---cCcceEEEEcC
Confidence 889999999999999996665444 567878876555432 778999999999999 99999999999
Q ss_pred CHHHHHHHHHcCCeEEEEcCCCCCcccccchhhhhhhh
Q 026543 182 APSGVLAAKNAGMSVVMVPDPRLDSSYHSNADQLLSSL 219 (237)
Q Consensus 182 ~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~~~ 219 (237)
+.+|+++++.+|+.++ .++..+.....+++++.+.
T Consensus 149 s~nDi~~~~~ag~~~a---~~~~~~~~~~~Ad~v~~~~ 183 (211)
T 3ij5_A 149 DLIDWPVMAQVGLSVA---VADAHPLLLPKAHYVTRIK 183 (211)
T ss_dssp SGGGHHHHTTSSEEEE---CTTSCTTTGGGSSEECSSC
T ss_pred CHHHHHHHHHCCCEEE---eCCccHHHHhhCCEEEeCC
Confidence 9999999999996644 3334444456677776654
|
| >3gyg_A NTD biosynthesis operon putative hydrolase NTDB; PF05116, PF08282, MCSG, PSI-2, haloacid dehalogenase-like HY structural genomics; 2.45A {Bacillus subtilis subsp} | Back alignment and structure |
|---|
Probab=99.79 E-value=4.2e-20 Score=144.03 Aligned_cols=118 Identities=12% Similarity=0.070 Sum_probs=88.7
Q ss_pred CCCccHHHHHHHHHhC-CCCEEEEeCC---------------------hhhHHHHHHhhhhhhhhhccee----------
Q 026543 94 ELMPGASHLIRHLHAK-GIPMCVATGS---------------------LARHFELKTQKHRELFSLMHHV---------- 141 (237)
Q Consensus 94 ~~~~~~~~~l~~l~~~-g~~v~i~s~~---------------------~~~~~~~~~~~~~gl~~~f~~~---------- 141 (237)
...+++.++++.++++ |+++++.|+. ... ....+++..|+..+|..+
T Consensus 122 ~~~~~v~e~l~~l~~~~g~~l~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~g~~~~~~~~~~~~~~~~~~ 200 (289)
T 3gyg_A 122 FSKEKVEKLVKQLHENHNILLNPQTQLGKSRYKHNFYYQEQDEINDKKNLL-AIEKICEEYGVSVNINRCNPLAGDPEDS 200 (289)
T ss_dssp CCHHHHHHHHHHHHHHSSCCCEEGGGTCGGGTTCCEEEECCCHHHHHHHHH-HHHHHHHHHTEEEEEEECCGGGTCCTTE
T ss_pred CCHHHHHHHHHHHHhhhCceeeecccccccceEEEEEEeccccccchHHHH-HHHHHHHHcCCCEEEEEccccccCCCCc
Confidence 5778999999999987 9999999874 122 223455666666666554
Q ss_pred eeCCCCCccCCCCCHHHHHHHHHHcCCCCCCCCcEEEEecCHHHHHHHHHcCCeEEEEcCCCCCcccccchhhhhhhhc
Q 026543 142 VRGDDPEVKQGKPSPDIFLAAAKRFEGGPIDSQEILVFEDAPSGVLAAKNAGMSVVMVPDPRLDSSYHSNADQLLSSLL 220 (237)
Q Consensus 142 ~~~~~~~~~~~kp~~~~~~~~l~~~~~~~~~~~~~~~igD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~~~~ 220 (237)
++.+ .....++++..+.++++++| +++++|++|||+.||+.+++.+|+ .|..++..+..+..+++++.+..
T Consensus 201 ~~~~--~~~~~~~k~~~~~~~~~~~~---~~~~~~~~~GDs~~D~~~~~~ag~---~~~~~~~~~~~~~~a~~v~~~~~ 271 (289)
T 3gyg_A 201 YDVD--FIPIGTGKNEIVTFMLEKYN---LNTERAIAFGDSGNDVRMLQTVGN---GYLLKNATQEAKNLHNLITDSEY 271 (289)
T ss_dssp EEEE--EEESCCSHHHHHHHHHHHHT---CCGGGEEEEECSGGGHHHHTTSSE---EEECTTCCHHHHHHCCCBCSSCH
T ss_pred eEEE--EEeCCCCHHHHHHHHHHHcC---CChhhEEEEcCCHHHHHHHHhCCc---EEEECCccHHHHHhCCEEcCCCC
Confidence 4455 56678899999999999999 999999999999999999999994 44455555444555666665543
|
| >3dnp_A Stress response protein YHAX; structural PSI-2, protein structure initiative, midwest center for STR genomics, MCSG, unknown function; HET: MSE; 1.85A {Bacillus subtilis} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.79 E-value=2.9e-20 Score=144.96 Aligned_cols=200 Identities=11% Similarity=0.067 Sum_probs=116.2
Q ss_pred CCCccEEEEecCcccccchhhHHHHHHHHHHHc---CCCCCHHHHHHhcCCChHHHHHHHHHHhCCCC------------
Q 026543 7 KKPITHVIFDMDGLLLDTEKFYTEVQELILARY---NKTFDWSLKAKMMGKKAIEAAQVFVEETGISD------------ 71 (237)
Q Consensus 7 ~~~~~~vifD~DGTL~~~~~~~~~~~~~~~~~~---g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------ 71 (237)
+|++|+|+||+||||+++...+.....++++++ |..+.. ..|++.... ..+.+.+++..
T Consensus 3 ~M~~kli~fDlDGTLl~~~~~i~~~~~~al~~l~~~G~~~~i-----aTGR~~~~~-~~~~~~~~~~~~~i~~nGa~i~~ 76 (290)
T 3dnp_A 3 AMSKQLLALNIDGALLRSNGKIHQATKDAIEYVKKKGIYVTL-----VTNRHFRSA-QKIAKSLKLDAKLITHSGAYIAE 76 (290)
T ss_dssp ---CCEEEECCCCCCSCTTSCCCHHHHHHHHHHHHTTCEEEE-----BCSSCHHHH-HHHHHHTTCCSCEEEGGGTEEES
T ss_pred CCcceEEEEcCCCCCCCCCCccCHHHHHHHHHHHHCCCEEEE-----ECCCChHHH-HHHHHHcCCCCeEEEcCCeEEEc
Confidence 456899999999999999887777776666554 443221 224444433 44555554430
Q ss_pred ---------CCCHHHHHHHHHHHHHhhc------------C----------------------CCCCCccHHHHHHHHHh
Q 026543 72 ---------KLSAEDFLVQREETLQTLF------------P----------------------TSELMPGASHLIRHLHA 108 (237)
Q Consensus 72 ---------~~~~~~~~~~~~~~~~~~~------------~----------------------~~~~~~~~~~~l~~l~~ 108 (237)
....+...+..+...+... . .....++..+++..+..
T Consensus 77 ~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (290)
T 3dnp_A 77 KIDAPFFEKRISDDHTFNIVQVLESYQCNIRLLHEKYSIGNKKKVNSNLLGKALIHPSDPIFYPVQFVESLSDLLMDEPV 156 (290)
T ss_dssp STTSCSEECCCCHHHHHHHHHHHHTSSCEEEEECSSCEEECCCCCCCHHHHHSCCCCCBTTTBCEEECSCHHHHHHHSCC
T ss_pred CCCCEEEecCCCHHHHHHHHHHHHHcCceEEEEECCcEEeeccccchhhhhhhhccccccccccccccCCHHHHHhcCCC
Confidence 1223333333222211000 0 01123344555554444
Q ss_pred CCCCEEEEeCChhhHHHHHHhhh-hhhhhhcceeeeCCC--CCccCCCCCHHHHHHHHHHcCCCCCCCCcEEEEecCHHH
Q 026543 109 KGIPMCVATGSLARHFELKTQKH-RELFSLMHHVVRGDD--PEVKQGKPSPDIFLAAAKRFEGGPIDSQEILVFEDAPSG 185 (237)
Q Consensus 109 ~g~~v~i~s~~~~~~~~~~~~~~-~gl~~~f~~~~~~~~--~~~~~~kp~~~~~~~~l~~~~~~~~~~~~~~~igD~~~D 185 (237)
...++.+..+ ..... .+.+. ......+..+.++.. .....+.+++.++..+++++| ++++++++|||+.||
T Consensus 157 ~~~ki~~~~~--~~~~~-~~~~~l~~~~~~~~~~~s~~~~~ei~~~~~~K~~~l~~l~~~lg---i~~~~~i~~GD~~ND 230 (290)
T 3dnp_A 157 SAPVIEVYTE--HDIQH-DITETITKAFPAVDVIRVNDEKLNIVPKGVSKEAGLALVASELG---LSMDDVVAIGHQYDD 230 (290)
T ss_dssp CCSEEEEECC--GGGHH-HHHHHHHHHCTTEEEEEEETTEEEEEETTCCHHHHHHHHHHHTT---CCGGGEEEEECSGGG
T ss_pred CceEEEEeCC--HHHHH-HHHHHHHhhCCcEEEEEeCCCeEEEEECCCCHHHHHHHHHHHcC---CCHHHEEEECCchhh
Confidence 4455533322 22222 12222 122233444443320 034466788999999999999 999999999999999
Q ss_pred HHHHHHcCCeEEEEcCCCCCcccccchhhhhhhhcc
Q 026543 186 VLAAKNAGMSVVMVPDPRLDSSYHSNADQLLSSLLG 221 (237)
Q Consensus 186 i~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~~~~e 221 (237)
++|++.+| +.|.+++..+..+..|++++.+..|
T Consensus 231 i~m~~~ag---~~vam~na~~~~k~~Ad~v~~s~~e 263 (290)
T 3dnp_A 231 LPMIELAG---LGVAMGNAVPEIKRKADWVTRSNDE 263 (290)
T ss_dssp HHHHHHSS---EEEECTTSCHHHHHHSSEECCCTTT
T ss_pred HHHHHhcC---CEEEecCCcHHHHHhcCEECCCCCc
Confidence 99999999 6777788877777888888877655
|
| >3mn1_A Probable YRBI family phosphatase; structural genomics, PSI, protein structure initiative, NYSG phosphatase; 1.80A {Pseudomonas syringae PV} PDB: 3nrj_A | Back alignment and structure |
|---|
Probab=99.79 E-value=7.2e-20 Score=133.89 Aligned_cols=99 Identities=12% Similarity=0.169 Sum_probs=78.2
Q ss_pred HHHHHHhCCCCEEEEeCChhhHHHHHHhhhhhhhhhcceeeeCCCCCccCCCCCHHHHHHHHHHcCCCCCCCCcEEEEec
Q 026543 102 LIRHLHAKGIPMCVATGSLARHFELKTQKHRELFSLMHHVVRGDDPEVKQGKPSPDIFLAAAKRFEGGPIDSQEILVFED 181 (237)
Q Consensus 102 ~l~~l~~~g~~v~i~s~~~~~~~~~~~~~~~gl~~~f~~~~~~~~~~~~~~kp~~~~~~~~l~~~~~~~~~~~~~~~igD 181 (237)
+++.|+++|++++|+||....... .+++.+|+..+|+.+ ++++..+..+++++| +++++|++|||
T Consensus 54 ~l~~L~~~g~~~~i~T~~~~~~~~-~~~~~lgl~~~f~~~-----------~~K~~~~~~~~~~~g---~~~~~~~~vGD 118 (189)
T 3mn1_A 54 GIKMLIASGVTTAIISGRKTAIVE-RRAKSLGIEHLFQGR-----------EDKLVVLDKLLAELQ---LGYEQVAYLGD 118 (189)
T ss_dssp HHHHHHHTTCEEEEECSSCCHHHH-HHHHHHTCSEEECSC-----------SCHHHHHHHHHHHHT---CCGGGEEEEEC
T ss_pred HHHHHHHCCCEEEEEECcChHHHH-HHHHHcCCHHHhcCc-----------CChHHHHHHHHHHcC---CChhHEEEECC
Confidence 889999999999999997665544 567888886666543 556799999999999 99999999999
Q ss_pred CHHHHHHHHHcCCeEEEEcCCCCCcccccchhhhhhh
Q 026543 182 APSGVLAAKNAGMSVVMVPDPRLDSSYHSNADQLLSS 218 (237)
Q Consensus 182 ~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~~ 218 (237)
+.+|+++++.+|+.++ .++..+.....+++++.+
T Consensus 119 ~~nDi~~~~~ag~~~~---~~~~~~~~~~~ad~v~~~ 152 (189)
T 3mn1_A 119 DLPDLPVIRRVGLGMA---VANAASFVREHAHGITRA 152 (189)
T ss_dssp SGGGHHHHHHSSEEEE---CTTSCHHHHHTSSEECSS
T ss_pred CHHHHHHHHHCCCeEE---eCCccHHHHHhCCEEecC
Confidence 9999999999996543 334444445556666665
|
| >1k1e_A Deoxy-D-mannose-octulosonate 8-phosphate phosphat; structural genomics, KDO 8-P phosphatase, structure function project, S2F; HET: MES; 1.67A {Haemophilus influenzae RD} SCOP: c.108.1.5 PDB: 1j8d_A* | Back alignment and structure |
|---|
Probab=99.79 E-value=7.4e-20 Score=132.85 Aligned_cols=105 Identities=13% Similarity=0.108 Sum_probs=81.4
Q ss_pred cHHHHHHHHHhCCCCEEEEeCChhhHHHHHHhhhhhhhhhcceeeeCCCCCccCCCCCHHHHHHHHHHcCCCCCCCCcEE
Q 026543 98 GASHLIRHLHAKGIPMCVATGSLARHFELKTQKHRELFSLMHHVVRGDDPEVKQGKPSPDIFLAAAKRFEGGPIDSQEIL 177 (237)
Q Consensus 98 ~~~~~l~~l~~~g~~v~i~s~~~~~~~~~~~~~~~gl~~~f~~~~~~~~~~~~~~kp~~~~~~~~l~~~~~~~~~~~~~~ 177 (237)
...++++.|+++|++++++||+...... .+++.+|+..+|+ + .||++..+..++++++ ++|++++
T Consensus 39 ~~~~~l~~L~~~G~~~~i~Tg~~~~~~~-~~~~~lgl~~~~~----~-------~k~k~~~~~~~~~~~~---~~~~~~~ 103 (180)
T 1k1e_A 39 RDGLGIKMLMDADIQVAVLSGRDSPILR-RRIADLGIKLFFL----G-------KLEKETACFDLMKQAG---VTAEQTA 103 (180)
T ss_dssp HHHHHHHHHHHTTCEEEEEESCCCHHHH-HHHHHHTCCEEEE----S-------CSCHHHHHHHHHHHHT---CCGGGEE
T ss_pred chHHHHHHHHHCCCeEEEEeCCCcHHHH-HHHHHcCCceeec----C-------CCCcHHHHHHHHHHcC---CCHHHEE
Confidence 3447999999999999999997665544 5677777755442 1 4889999999999999 9999999
Q ss_pred EEecCHHHHHHHHHcCCeEEEEcCCCCCcccccchhhhhhhhc
Q 026543 178 VFEDAPSGVLAAKNAGMSVVMVPDPRLDSSYHSNADQLLSSLL 220 (237)
Q Consensus 178 ~igD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~~~~ 220 (237)
+|||+.+|+++++.+|+.+++. +..+.....+++++.+..
T Consensus 104 ~vGD~~~Di~~~~~ag~~~~~~---~~~~~~~~~ad~v~~~~~ 143 (180)
T 1k1e_A 104 YIGDDSVDLPAFAACGTSFAVA---DAPIYVKNAVDHVLSTHG 143 (180)
T ss_dssp EEECSGGGHHHHHHSSEEEECT---TSCHHHHTTSSEECSSCT
T ss_pred EECCCHHHHHHHHHcCCeEEeC---CccHHHHhhCCEEecCCC
Confidence 9999999999999999876642 333334456777666543
|
| >3bwv_A Putative 5'(3')-deoxyribonucleotidase; NP_764060.1, deoxyribonucleotidase-like protein; HET: MSE; 1.55A {Staphylococcus epidermidis} | Back alignment and structure |
|---|
Probab=99.78 E-value=5.5e-19 Score=128.24 Aligned_cols=165 Identities=15% Similarity=0.138 Sum_probs=105.7
Q ss_pred ccEEEEecCcccccchhhHHHHHHHHHHHcCCCCCHHHHHHhcCCChHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHH-h
Q 026543 10 ITHVIFDMDGLLLDTEKFYTEVQELILARYNKTFDWSLKAKMMGKKAIEAAQVFVEETGISDKLSAEDFLVQREETLQ-T 88 (237)
Q Consensus 10 ~~~vifD~DGTL~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 88 (237)
+++|+|||||||+|+...+..++.+ .+|...+.+.. .+.+.... ++.. .+.+.+.+ +. .
T Consensus 4 ~~~viFD~DGtL~Ds~~~~~~~~~~---~~g~~~~~~~~---~g~~~~~~-------~~~~----~~~~~~~~---~~~~ 63 (180)
T 3bwv_A 4 RQRIAIDMDEVLADTLGAVVKAVNE---RADLNIKMESL---NGKKLKHM-------IPEH----EGLVMDIL---KEPG 63 (180)
T ss_dssp CCEEEEETBTTTBCHHHHHHHHHHH---HSCCCCCGGGC---TTCCC-------------------CHHHHHH---HSTT
T ss_pred ccEEEEeCCCcccccHHHHHHHHHH---HhCCCCCHHHH---cCccHHHH-------CCch----HHHHHHHH---hCcc
Confidence 5899999999999999888777765 67776554432 23332221 1111 11222222 11 1
Q ss_pred hcCCCCCCccHHHHHHHHHhCCCCEEEEeCCh---hhH-HHHHHh-hhhhhhhhcceeeeCCCCCccCCCCCHHHHHHHH
Q 026543 89 LFPTSELMPGASHLIRHLHAKGIPMCVATGSL---ARH-FELKTQ-KHRELFSLMHHVVRGDDPEVKQGKPSPDIFLAAA 163 (237)
Q Consensus 89 ~~~~~~~~~~~~~~l~~l~~~g~~v~i~s~~~---~~~-~~~~~~-~~~gl~~~f~~~~~~~~~~~~~~kp~~~~~~~~l 163 (237)
.....+++||+.++|+.|+++ ++++|+||+. ... .....+ +.++...+++.+++++ ..
T Consensus 64 ~~~~~~~~pg~~e~L~~L~~~-~~~~i~T~~~~~~~~~~~~~~~l~~~f~~~~~~~~i~~~~--~~-------------- 126 (180)
T 3bwv_A 64 FFRNLDVMPHAQEVVKQLNEH-YDIYIATAAMDVPTSFHDKYEWLLEYFPFLDPQHFVFCGR--KN-------------- 126 (180)
T ss_dssp GGGSCCBCTTHHHHHHHHTTT-SEEEEEECC--CCSHHHHHHHHHHHHCTTSCGGGEEECSC--GG--------------
T ss_pred hhccCCCCcCHHHHHHHHHhc-CCEEEEeCCCCcchHHHHHHHHHHHHcCCCCcccEEEeCC--cC--------------
Confidence 233578999999999999985 9999999962 111 112223 3345556678888877 31
Q ss_pred HHcCCCCCCCCcEEEEecCHHHHHHHHHcCCeEEEEcCCCCCcccccchhhhhhhhcccCCC
Q 026543 164 KRFEGGPIDSQEILVFEDAPSGVLAAKNAGMSVVMVPDPRLDSSYHSNADQLLSSLLGFNPK 225 (237)
Q Consensus 164 ~~~~~~~~~~~~~~~igD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~~~~el~~~ 225 (237)
++ ++|++||||++++. ..+| .+++|..+.... ..++.+++++.|+...
T Consensus 127 -~l-------~~~l~ieDs~~~i~--~aaG-~~i~~~~~~~~~---~~~~~~i~~~~el~~~ 174 (180)
T 3bwv_A 127 -II-------LADYLIDDNPKQLE--IFEG-KSIMFTASHNVY---EHRFERVSGWRDVKNY 174 (180)
T ss_dssp -GB-------CCSEEEESCHHHHH--HCSS-EEEEECCGGGTT---CCSSEEECSHHHHHHH
T ss_pred -ee-------cccEEecCCcchHH--HhCC-CeEEeCCCcccC---CCCceecCCHHHHHHH
Confidence 12 36899999999985 4589 999998654421 4577888888887543
|
| >3n07_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; structural genomics, phosphatase, PSI-2, protein structure initiative; HET: MSE; 1.76A {Vibrio cholerae} | Back alignment and structure |
|---|
Probab=99.78 E-value=3.9e-20 Score=135.63 Aligned_cols=99 Identities=11% Similarity=0.105 Sum_probs=76.5
Q ss_pred HHHHHHhCCCCEEEEeCChhhHHHHHHhhhhhhhhhcceeeeCCCCCccCCCCCHHHHHHHHHHcCCCCCCCCcEEEEec
Q 026543 102 LIRHLHAKGIPMCVATGSLARHFELKTQKHRELFSLMHHVVRGDDPEVKQGKPSPDIFLAAAKRFEGGPIDSQEILVFED 181 (237)
Q Consensus 102 ~l~~l~~~g~~v~i~s~~~~~~~~~~~~~~~gl~~~f~~~~~~~~~~~~~~kp~~~~~~~~l~~~~~~~~~~~~~~~igD 181 (237)
.++.|+++|++++|+||....... .+++.+|+..+|+. .||++..+..++++++ ++++++++|||
T Consensus 60 ~l~~L~~~G~~~~ivT~~~~~~~~-~~l~~lgi~~~~~~-----------~k~k~~~~~~~~~~~~---~~~~~~~~vGD 124 (195)
T 3n07_A 60 GVKALMNAGIEIAIITGRRSQIVE-NRMKALGISLIYQG-----------QDDKVQAYYDICQKLA---IAPEQTGYIGD 124 (195)
T ss_dssp HHHHHHHTTCEEEEECSSCCHHHH-HHHHHTTCCEEECS-----------CSSHHHHHHHHHHHHC---CCGGGEEEEES
T ss_pred HHHHHHHCCCEEEEEECcCHHHHH-HHHHHcCCcEEeeC-----------CCCcHHHHHHHHHHhC---CCHHHEEEEcC
Confidence 478899999999999997665544 56777777544321 2889999999999999 99999999999
Q ss_pred CHHHHHHHHHcCCeEEEEcCCCCCcccccchhhhhhh
Q 026543 182 APSGVLAAKNAGMSVVMVPDPRLDSSYHSNADQLLSS 218 (237)
Q Consensus 182 ~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~~ 218 (237)
+.||+++++.+|+.+ ..++..+..+..+++++.+
T Consensus 125 ~~nDi~~~~~ag~~v---a~~na~~~~~~~ad~v~~~ 158 (195)
T 3n07_A 125 DLIDWPVMEKVALRV---CVADGHPLLAQRANYVTHI 158 (195)
T ss_dssp SGGGHHHHTTSSEEE---ECTTSCHHHHHHCSEECSS
T ss_pred CHHHHHHHHHCCCEE---EECChHHHHHHhCCEEEcC
Confidence 999999999999654 3444544445556655544
|
| >3n1u_A Hydrolase, HAD superfamily, subfamily III A; structural genomics, PSI-2; 1.80A {Legionella pneumophila} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.77 E-value=2.8e-19 Score=130.90 Aligned_cols=99 Identities=12% Similarity=0.110 Sum_probs=77.9
Q ss_pred HHHHHHhCCCCEEEEeCChhhHHHHHHhhhhhhhhhcceeeeCCCCCccCCCCCHHHHHHHHHHcCCCCCCCCcEEEEec
Q 026543 102 LIRHLHAKGIPMCVATGSLARHFELKTQKHRELFSLMHHVVRGDDPEVKQGKPSPDIFLAAAKRFEGGPIDSQEILVFED 181 (237)
Q Consensus 102 ~l~~l~~~g~~v~i~s~~~~~~~~~~~~~~~gl~~~f~~~~~~~~~~~~~~kp~~~~~~~~l~~~~~~~~~~~~~~~igD 181 (237)
.++.|+++|++++++||+...... ..++.+|+..+|+.+ ||++..+..++++++ ++|+++++|||
T Consensus 54 ~l~~L~~~g~~~~ivTn~~~~~~~-~~l~~lgl~~~~~~~-----------kpk~~~~~~~~~~~~---~~~~~~~~vGD 118 (191)
T 3n1u_A 54 GLKLLMAAGIQVAIITTAQNAVVD-HRMEQLGITHYYKGQ-----------VDKRSAYQHLKKTLG---LNDDEFAYIGD 118 (191)
T ss_dssp HHHHHHHTTCEEEEECSCCSHHHH-HHHHHHTCCEEECSC-----------SSCHHHHHHHHHHHT---CCGGGEEEEEC
T ss_pred HHHHHHHCCCeEEEEeCcChHHHH-HHHHHcCCccceeCC-----------CChHHHHHHHHHHhC---CCHHHEEEECC
Confidence 478899999999999997666554 467777775544322 899999999999999 99999999999
Q ss_pred CHHHHHHHHHcCCeEEEEcCCCCCcccccchhhhhhh
Q 026543 182 APSGVLAAKNAGMSVVMVPDPRLDSSYHSNADQLLSS 218 (237)
Q Consensus 182 ~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~~ 218 (237)
+.+|+++++.+|+.++ .++..+.....+++++.+
T Consensus 119 ~~~Di~~~~~ag~~~~---~~~~~~~~~~~ad~v~~~ 152 (191)
T 3n1u_A 119 DLPDLPLIQQVGLGVA---VSNAVPQVLEFADWRTER 152 (191)
T ss_dssp SGGGHHHHHHSSEEEE---CTTCCHHHHHHSSEECSS
T ss_pred CHHHHHHHHHCCCEEE---eCCccHHHHHhCCEEecC
Confidence 9999999999997753 334444445566776665
|
| >3zvl_A Bifunctional polynucleotide phosphatase/kinase; hydrolase-transferase complex, base excision repair, BER, non-homologous END-joining, NHEJ; 1.65A {Mus musculus} PDB: 3zvm_A* 3zvn_A* 1yj5_A 3u7e_B* 3u7f_B* 3u7h_B* 3u7g_A* | Back alignment and structure |
|---|
Probab=99.75 E-value=5.9e-18 Score=137.95 Aligned_cols=101 Identities=19% Similarity=0.278 Sum_probs=84.3
Q ss_pred CCccHHHHHHHHHhCCCCEEEEeCChh--------hHH---HHHHhhhhhhhhhcceeeeCCCCCccCCCCCHHHHHHHH
Q 026543 95 LMPGASHLIRHLHAKGIPMCVATGSLA--------RHF---ELKTQKHRELFSLMHHVVRGDDPEVKQGKPSPDIFLAAA 163 (237)
Q Consensus 95 ~~~~~~~~l~~l~~~g~~v~i~s~~~~--------~~~---~~~~~~~~gl~~~f~~~~~~~~~~~~~~kp~~~~~~~~l 163 (237)
++||+.++|+.|+++|++++|+||... ..+ ...+++.+|+ .|+.+++++ +....||+|.+|..++
T Consensus 88 ~~pgv~e~L~~L~~~G~~l~IvTN~~gi~~g~~~~~~~~~~~~~~l~~lgl--~fd~i~~~~--~~~~~KP~p~~~~~a~ 163 (416)
T 3zvl_A 88 LYPEIPKKLQELAAEGYKLVIFTNQMGIGRGKLPAEVFKGKVEAVLEKLGV--PFQVLVATH--AGLNRKPVSGMWDHLQ 163 (416)
T ss_dssp SCTTHHHHHHHHHHTTCEEEEEEECHHHHTTSSCHHHHHHHHHHHHHHHTS--CCEEEEECS--SSTTSTTSSHHHHHHH
T ss_pred hcccHHHHHHHHHHCCCeEEEEeCCccccCCCCCHHHHHHHHHHHHHHcCC--CEEEEEECC--CCCCCCCCHHHHHHHH
Confidence 799999999999999999999999541 111 3345666777 389999998 8889999999999999
Q ss_pred HHcCCC-CCCCCcEEEEecCH-----------------HHHHHHHHcCCeEEEE
Q 026543 164 KRFEGG-PIDSQEILVFEDAP-----------------SGVLAAKNAGMSVVMV 199 (237)
Q Consensus 164 ~~~~~~-~~~~~~~~~igD~~-----------------~Di~~a~~~G~~~i~v 199 (237)
+++|.. .++|++|+||||+. +|+.+|+++|++++..
T Consensus 164 ~~l~~~~~v~~~~~l~VGDs~gr~~~~~~~~~~~d~s~~Di~~A~~aGi~f~~p 217 (416)
T 3zvl_A 164 EQANEGIPISVEDSVFVGDAAGRLANWAPGRKKKDFSCADRLFALNVGLPFATP 217 (416)
T ss_dssp HHSSTTCCCCGGGCEEECSCSCBCTTSSTTCCSCCSCCHHHHHHHHHTCCEECH
T ss_pred HHhCCCCCCCHHHeEEEECCCCCcccccccccccCCChhhHHHHHHcCCcccCc
Confidence 999410 18999999999997 8999999999987654
|
| >4dw8_A Haloacid dehalogenase-like hydrolase; HAD, putative phosphatase, enzyme function initiative, EFI, structural genomics; 1.50A {Bacteroides thetaiotaomicron} PDB: 3niw_A 4dwo_A | Back alignment and structure |
|---|
Probab=99.75 E-value=1.6e-19 Score=140.06 Aligned_cols=67 Identities=16% Similarity=0.117 Sum_probs=58.1
Q ss_pred ccCCCCCHHHHHHHHHHcCCCCCCCCcEEEEecCHHHHHHHHHcCCeEEEEcCCCCCcccccchhhhhhhhcc
Q 026543 149 VKQGKPSPDIFLAAAKRFEGGPIDSQEILVFEDAPSGVLAAKNAGMSVVMVPDPRLDSSYHSNADQLLSSLLG 221 (237)
Q Consensus 149 ~~~~kp~~~~~~~~l~~~~~~~~~~~~~~~igD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~~~~e 221 (237)
...+++|+.+++.+++++| ++++++++|||+.||++|++.+| ++|.+++..+..+..|++++.+..|
T Consensus 192 ~~~~~~K~~~l~~l~~~lg---i~~~~~i~~GD~~NDi~m~~~ag---~~vam~na~~~~k~~A~~v~~~~~e 258 (279)
T 4dw8_A 192 VPQGIDKALSLSVLLENIG---MTREEVIAIGDGYNDLSMIKFAG---MGVAMGNAQEPVKKAADYITLTNDE 258 (279)
T ss_dssp ECTTCCHHHHHHHHHHHHT---CCGGGEEEEECSGGGHHHHHHSS---EEEECTTSCHHHHHHCSEECCCGGG
T ss_pred ecCCCChHHHHHHHHHHcC---CCHHHEEEECCChhhHHHHHHcC---cEEEcCCCcHHHHHhCCEEcCCCCC
Confidence 4466788999999999999 99999999999999999999999 7788888877777778888776544
|
| >2r8e_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; YRBI, divalent metal, HAD superfamily, KDO 8-P, hydrolase; 1.40A {Escherichia coli O6} PDB: 2r8x_A 2r8y_A 2r8z_A 3hyc_A 3i6b_A* | Back alignment and structure |
|---|
Probab=99.73 E-value=1.9e-17 Score=120.93 Aligned_cols=100 Identities=16% Similarity=0.133 Sum_probs=78.1
Q ss_pred HHHHHHhCCCCEEEEeCChhhHHHHHHhhhhhhhhhcceeeeCCCCCccCCCCCHHHHHHHHHHcCCCCCCCCcEEEEec
Q 026543 102 LIRHLHAKGIPMCVATGSLARHFELKTQKHRELFSLMHHVVRGDDPEVKQGKPSPDIFLAAAKRFEGGPIDSQEILVFED 181 (237)
Q Consensus 102 ~l~~l~~~g~~v~i~s~~~~~~~~~~~~~~~gl~~~f~~~~~~~~~~~~~~kp~~~~~~~~l~~~~~~~~~~~~~~~igD 181 (237)
+++.|+++|++++|+||+...... .+++.+|+..+|+ ..||++..+..+++++| ++|++++||||
T Consensus 61 ~l~~L~~~g~~v~ivT~~~~~~~~-~~l~~lgl~~~~~-----------~~kpk~~~~~~~~~~~g---~~~~~~~~iGD 125 (188)
T 2r8e_A 61 GIRCALTSDIEVAIITGRKAKLVE-DRCATLGITHLYQ-----------GQSNKLIAFSDLLEKLA---IAPENVAYVGD 125 (188)
T ss_dssp HHHHHHTTTCEEEEECSSCCHHHH-HHHHHHTCCEEEC-----------SCSCSHHHHHHHHHHHT---CCGGGEEEEES
T ss_pred HHHHHHHCCCeEEEEeCCChHHHH-HHHHHcCCceeec-----------CCCCCHHHHHHHHHHcC---CCHHHEEEECC
Confidence 889999999999999997665544 4566666644332 24899999999999999 99999999999
Q ss_pred CHHHHHHHHHcCCeEEEEcCCCCCcccccchhhhhhhh
Q 026543 182 APSGVLAAKNAGMSVVMVPDPRLDSSYHSNADQLLSSL 219 (237)
Q Consensus 182 ~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~~~ 219 (237)
+.+|+++++.+|+.+++. +..+.....+++++.+.
T Consensus 126 ~~~Di~~a~~ag~~~~~~---~~~~~~~~~ad~v~~~~ 160 (188)
T 2r8e_A 126 DLIDWPVMEKVGLSVAVA---DAHPLLIPRADYVTRIA 160 (188)
T ss_dssp SGGGHHHHTTSSEEEECT---TSCTTTGGGSSEECSSC
T ss_pred CHHHHHHHHHCCCEEEec---CcCHHHHhcCCEEEeCC
Confidence 999999999999876543 22233345577777665
|
| >3mpo_A Predicted hydrolase of the HAD superfamily; SGX, PSI, structural genomics, protein structure initiative; 2.90A {Lactobacillus brevis} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.73 E-value=3.6e-19 Score=138.00 Aligned_cols=199 Identities=11% Similarity=0.080 Sum_probs=97.6
Q ss_pred CCccEEEEecCcccccchhhHHHHHHHHHHHc---CCCCCHHHHHHhcCCChHHHHHHHHHHhCCCCC----CCHHHHHH
Q 026543 8 KPITHVIFDMDGLLLDTEKFYTEVQELILARY---NKTFDWSLKAKMMGKKAIEAAQVFVEETGISDK----LSAEDFLV 80 (237)
Q Consensus 8 ~~~~~vifD~DGTL~~~~~~~~~~~~~~~~~~---g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~ 80 (237)
|++|+|+||+||||+++...+...+.++++++ |..+.. ..|++... ...+++.+++... ...+..
T Consensus 3 m~~kli~~DlDGTLl~~~~~i~~~~~~al~~l~~~G~~~~i-----aTGR~~~~-~~~~~~~l~~~~~~~~~i~~nGa-- 74 (279)
T 3mpo_A 3 LTIKLIAIDIDGTLLNEKNELAQATIDAVQAAKAQGIKVVL-----CTGRPLTG-VQPYLDAMDIDGDDQYAITFNGS-- 74 (279)
T ss_dssp --CCEEEECC-----------CHHHHHHHHHHHHTTCEEEE-----ECSSCHHH-HHHHHHHTTCCSSSCEEEEGGGT--
T ss_pred cceEEEEEcCcCCCCCCCCcCCHHHHHHHHHHHHCCCEEEE-----EcCCCHHH-HHHHHHHcCCCCCCCEEEEcCcE--
Confidence 35899999999999999887777776666554 432221 22454443 3445555554310 000000
Q ss_pred HHH-HHHHhhcCCCCCCccHHHHHHHHHhCCCCEEEEeCC----------------------------------------
Q 026543 81 QRE-ETLQTLFPTSELMPGASHLIRHLHAKGIPMCVATGS---------------------------------------- 119 (237)
Q Consensus 81 ~~~-~~~~~~~~~~~~~~~~~~~l~~l~~~g~~v~i~s~~---------------------------------------- 119 (237)
.+. ...+.........+.+.++++.+++.++.+.+.|+.
T Consensus 75 i~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k 154 (279)
T 3mpo_A 75 VAQTISGKVLTNHSLTYEDYIDLEAWARKVRAHFQIETPDYIYTANKDISAYTIAESYLVRMLIQYREVSETPRDLTISK 154 (279)
T ss_dssp EEEETTSCEEEECCCCHHHHHHHHHHHHHTTCCEEEECSSCEEECCSBCCHHHHHHHHHHTCCEEECCGGGSCTTCCCCE
T ss_pred EEECCCCCEEEecCCCHHHHHHHHHHHHHcCCeEEEEECCEEEEcCCcchHHHHHHhhccCCcceecCHHHhhccCCcEE
Confidence 000 000000111223345555666666555555555432
Q ss_pred -----hhhHHHHHHhhhh--hhhhhcceeeeCCCC--CccCCCCCHHHHHHHHHHcCCCCCCCCcEEEEecCHHHHHHHH
Q 026543 120 -----LARHFELKTQKHR--ELFSLMHHVVRGDDP--EVKQGKPSPDIFLAAAKRFEGGPIDSQEILVFEDAPSGVLAAK 190 (237)
Q Consensus 120 -----~~~~~~~~~~~~~--gl~~~f~~~~~~~~~--~~~~~kp~~~~~~~~l~~~~~~~~~~~~~~~igD~~~Di~~a~ 190 (237)
...... .+.+.+ .+...+..+.++... ....+..|+.+++.+++++| ++++++++|||+.||++|++
T Consensus 155 i~~~~~~~~~~-~~~~~l~~~~~~~~~~~~s~~~~~ei~~~~~~K~~~l~~l~~~lg---i~~~~~i~~GD~~NDi~m~~ 230 (279)
T 3mpo_A 155 AMFVDYPQVIE-QVKANMPQDFKDRFSVVQSAPYFIEVMNRRASKGGTLSELVDQLG---LTADDVMTLGDQGNDLTMIK 230 (279)
T ss_dssp EEEECCHHHHH-HHHHHCCHHHHHHEEEECCSSSEEEEEESSCCHHHHHHHHHHHTT---CCGGGEEEC--CCTTHHHHH
T ss_pred EEEcCCHHHHH-HHHHHHHHHhCCCEEEEEecCceEEEecCCCChHHHHHHHHHHcC---CCHHHEEEECCchhhHHHHH
Confidence 111111 122221 122334555444310 12344558999999999999 99999999999999999999
Q ss_pred HcCCeEEEEcCCCCCcccccchhhhhhhhcc
Q 026543 191 NAGMSVVMVPDPRLDSSYHSNADQLLSSLLG 221 (237)
Q Consensus 191 ~~G~~~i~v~~~~~~~~~~~~~~~~~~~~~e 221 (237)
.+| ++|.+++..+..+..|++++.+..|
T Consensus 231 ~ag---~~vam~na~~~~k~~A~~v~~~~~e 258 (279)
T 3mpo_A 231 YAG---LGVAMGNAIDEVKEAAQAVTLTNAE 258 (279)
T ss_dssp HST---EECBC---CCHHHHHCSCBC-----
T ss_pred hcC---ceeeccCCCHHHHHhcceeccCCCc
Confidence 999 7788888877778888888877544
|
| >3fzq_A Putative hydrolase; YP_001086940.1, putative haloacid dehalogenase-like hydrolas structural genomics, joint center for structural genomics; HET: MSE; 2.10A {Clostridium difficile} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.73 E-value=4.8e-19 Score=136.84 Aligned_cols=67 Identities=9% Similarity=0.203 Sum_probs=58.0
Q ss_pred ccCCCCCHHHHHHHHHHcCCCCCCCCcEEEEecCHHHHHHHHHcCCeEEEEcCCCCCcccccchhhhhhhhcc
Q 026543 149 VKQGKPSPDIFLAAAKRFEGGPIDSQEILVFEDAPSGVLAAKNAGMSVVMVPDPRLDSSYHSNADQLLSSLLG 221 (237)
Q Consensus 149 ~~~~kp~~~~~~~~l~~~~~~~~~~~~~~~igD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~~~~e 221 (237)
...+++++.++.++++++| ++++++++|||+.||++|++.+| ++|.+++..+..+..|++++++..|
T Consensus 195 ~~~~~~K~~~l~~l~~~lg---i~~~~~i~~GD~~NDi~m~~~ag---~~vam~na~~~~k~~A~~v~~~~~e 261 (274)
T 3fzq_A 195 IQKDFHKGKAIKRLQERLG---VTQKETICFGDGQNDIVMFQASD---VTIAMKNSHQQLKDIATSICEDIFD 261 (274)
T ss_dssp EETTCSHHHHHHHHHHHHT---CCSTTEEEECCSGGGHHHHHTCS---EEEEETTSCHHHHHHCSEEECCGGG
T ss_pred eeCCCCHHHHHHHHHHHcC---CCHHHEEEECCChhHHHHHHhcC---ceEEecCccHHHHHhhhheeCCCch
Confidence 4567889999999999999 99999999999999999999999 6666778877777788888777654
|
| >1wr8_A Phosphoglycolate phosphatase; alpha / beta core domain, HAD superfamily, structural genomi structural genomics/proteomics initiative, RSGI; 1.60A {Pyrococcus horikoshii} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=99.72 E-value=2e-18 Score=130.30 Aligned_cols=194 Identities=15% Similarity=0.046 Sum_probs=113.6
Q ss_pred CccEEEEecCcccccchhhHHHHHHHHHHHc---CCCCCHHHHHHhcCCChHHHHHHHHHHhCCCCCCCHHHHHHHHHHH
Q 026543 9 PITHVIFDMDGLLLDTEKFYTEVQELILARY---NKTFDWSLKAKMMGKKAIEAAQVFVEETGISDKLSAEDFLVQREET 85 (237)
Q Consensus 9 ~~~~vifD~DGTL~~~~~~~~~~~~~~~~~~---g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (237)
++|+|+||+||||+++...+.....++++++ |+.+.. ..|++... ...+.+.++++.......-...+.
T Consensus 2 m~kli~~DlDGTLl~~~~~i~~~~~~al~~l~~~G~~v~i-----~TGR~~~~-~~~~~~~l~~~~~~i~~nGa~i~~-- 73 (231)
T 1wr8_A 2 KIKAISIDIDGTITYPNRMIHEKALEAIRRAESLGIPIML-----VTGNTVQF-AEAASILIGTSGPVVAEDGGAISY-- 73 (231)
T ss_dssp CCCEEEEESTTTTBCTTSCBCHHHHHHHHHHHHTTCCEEE-----ECSSCHHH-HHHHHHHHTCCSCEEEGGGTEEEE--
T ss_pred ceeEEEEECCCCCCCCCCcCCHHHHHHHHHHHHCCCEEEE-----EcCCChhH-HHHHHHHcCCCCeEEEeCCcEEEe--
Confidence 4799999999999998876655555555444 654332 23444443 334455556541000000000000
Q ss_pred HHhhcCCCCCCccHHHHHHHHH-hC-CCCE-----------EEEe-CChhhHHHHHHhhhhhhhhhcceeeeCCC-C-Cc
Q 026543 86 LQTLFPTSELMPGASHLIRHLH-AK-GIPM-----------CVAT-GSLARHFELKTQKHRELFSLMHHVVRGDD-P-EV 149 (237)
Q Consensus 86 ~~~~~~~~~~~~~~~~~l~~l~-~~-g~~v-----------~i~s-~~~~~~~~~~~~~~~gl~~~f~~~~~~~~-~-~~ 149 (237)
..+......+ +.+.++++.++ +. |+.+ .+++ +...... ..+++.++ ..|+.+ ++.. . ..
T Consensus 74 ~~~~~~~~~l-~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~--~~~~~~-~~~~~~ei~ 148 (231)
T 1wr8_A 74 KKKRIFLASM-DEEWILWNEIRKRFPNARTSYTMPDRRAGLVIMRETINVETV-REIINELN--LNLVAV-DSGFAIHVK 148 (231)
T ss_dssp TTEEEESCCC-SHHHHHHHHHHHHCTTCCBCTTGGGCSSCEEECTTTSCHHHH-HHHHHHTT--CSCEEE-ECSSCEEEE
T ss_pred CCEEEEeccH-HHHHHHHHHHHHhCCCceEEecCCCceeeEEEECCCCCHHHH-HHHHHhcC--CcEEEE-ecCcEEEEe
Confidence 0011111122 77777877777 54 5543 5555 2233322 23444432 456655 4320 0 23
Q ss_pred cCCCCCHHHHHHHHHHcCCCCCCCCcEEEEecCHHHHHHHHHcCCeEEEEcCCCCCcccccchhhhhhhhcc
Q 026543 150 KQGKPSPDIFLAAAKRFEGGPIDSQEILVFEDAPSGVLAAKNAGMSVVMVPDPRLDSSYHSNADQLLSSLLG 221 (237)
Q Consensus 150 ~~~kp~~~~~~~~l~~~~~~~~~~~~~~~igD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~~~~e 221 (237)
..++|++..+..+++++| ++++++++|||+.||+++++.+|+. +.+ ++..+..+..+++++.+..+
T Consensus 149 ~~~~~K~~~~~~~~~~~~---~~~~~~~~iGD~~nD~~~~~~ag~~-v~~--~~~~~~~~~~a~~v~~~~~e 214 (231)
T 1wr8_A 149 KPWINKGSGIEKASEFLG---IKPKEVAHVGDGENDLDAFKVVGYK-VAV--AQAPKILKENADYVTKKEYG 214 (231)
T ss_dssp CTTCCHHHHHHHHHHHHT---SCGGGEEEEECSGGGHHHHHHSSEE-EEC--TTSCHHHHTTCSEECSSCHH
T ss_pred cCCCChHHHHHHHHHHcC---CCHHHEEEECCCHHHHHHHHHcCCe-EEe--cCCCHHHHhhCCEEecCCCc
Confidence 567899999999999999 9999999999999999999999976 333 44433344567777665443
|
| >2rbk_A Putative uncharacterized protein; HAD-like phosphatase, unknown function; 1.00A {Bacteroides thetaiotaomicron} SCOP: c.108.1.10 PDB: 1ymq_A 2rb5_A 2rav_A 2rar_A | Back alignment and structure |
|---|
Probab=99.70 E-value=3.9e-19 Score=136.56 Aligned_cols=196 Identities=12% Similarity=0.096 Sum_probs=112.3
Q ss_pred cEEEEecCcccccchhh-HHHHHHHHH---HHcCCCCCHHHHHHhcCCChHHHHHHHHHHhC----CCCCCCHHHHHHHH
Q 026543 11 THVIFDMDGLLLDTEKF-YTEVQELIL---ARYNKTFDWSLKAKMMGKKAIEAAQVFVEETG----ISDKLSAEDFLVQR 82 (237)
Q Consensus 11 ~~vifD~DGTL~~~~~~-~~~~~~~~~---~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~ 82 (237)
|+|+||+||||+++... +.....+++ .+.|+.+.. ..|++ ... ..+.+.++ +..-...+ ....
T Consensus 3 kli~~DlDGTLl~~~~~~i~~~~~~al~~l~~~G~~~~i-----aTGR~-~~~-~~~~~~l~~~~~~~~~i~~n--Ga~i 73 (261)
T 2rbk_A 3 KALFFDIDGTLVSFETHRIPSSTIEALEAAHAKGLKIFI-----ATGRP-KAI-INNLSELQDRNLIDGYITMN--GAYC 73 (261)
T ss_dssp CEEEECSBTTTBCTTTSSCCHHHHHHHHHHHHTTCEEEE-----ECSSC-GGG-CCSCHHHHHTTCCCEEEEGG--GTEE
T ss_pred cEEEEeCCCCCcCCCCCcCCHHHHHHHHHHHHCCCEEEE-----ECCCh-HHH-HHHHHHhCcccccCeEEEeC--CEEE
Confidence 89999999999998876 555554444 344664332 23443 221 11122222 21000000 0000
Q ss_pred HHHHHhhcCCCCCCccHHHHHHHHHhCCCCEEEEeCChh------hHHHHHHhhhhhh-------------hhhcceeee
Q 026543 83 EETLQTLFPTSELMPGASHLIRHLHAKGIPMCVATGSLA------RHFELKTQKHREL-------------FSLMHHVVR 143 (237)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~v~i~s~~~~------~~~~~~~~~~~gl-------------~~~f~~~~~ 143 (237)
....+.........+.+.++++.+++.++.+.+.|+... ........+..++ ...+..++.
T Consensus 74 ~~~~~~i~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~ 153 (261)
T 2rbk_A 74 FVGEEVIYKSAIPQEEVKAMAAFCEKKGVPCIFVEEHNISVCQPNEMVKKIFYDFLHVNVIPTVSFEEASNKEVIQMTPF 153 (261)
T ss_dssp EETTEEEEECCCCHHHHHHHHHHHHHHTCCEEEECSSCEEEESCCHHHHHHTTTTTCCCCCCBCCHHHHHTSCCSEEEEC
T ss_pred EECCEEEEecCCCHHHHHHHHHHHHHcCCeEEEEeCCcEEEeCccHHHHHHHHHhhcccCCCccccchhccCceeEEEEE
Confidence 000001112233457788888888888888777765322 1111011111111 122222222
Q ss_pred CCC-----------------------CCccCCCCCHHHHHHHHHHcCCCCCCCCcEEEEecCHHHHHHHHHcCCeEEEEc
Q 026543 144 GDD-----------------------PEVKQGKPSPDIFLAAAKRFEGGPIDSQEILVFEDAPSGVLAAKNAGMSVVMVP 200 (237)
Q Consensus 144 ~~~-----------------------~~~~~~kp~~~~~~~~l~~~~~~~~~~~~~~~igD~~~Di~~a~~~G~~~i~v~ 200 (237)
+++ .....++|++.++..+++++| ++++++++|||+.||++|++.+|+. |.
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~s~~~~~ei~~~~~~K~~~~~~~~~~~~---~~~~~~~~iGD~~nD~~~~~~ag~~---v~ 227 (261)
T 2rbk_A 154 ITEEEEKEVLPSIPTCEIGRWYPAFADVTAKGDTKQKGIDEIIRHFG---IKLEETMSFGDGGNDISMLRHAAIG---VA 227 (261)
T ss_dssp CCHHHHHHHGGGSTTCEEECSSTTCCEEESTTCSHHHHHHHHHHHHT---CCGGGEEEEECSGGGHHHHHHSSEE---EE
T ss_pred eCHHHHHHHHHhcCCeEEEEecCCeEEecCCCCChHHHHHHHHHHcC---CCHHHEEEECCCHHHHHHHHHcCce---EE
Confidence 210 014567899999999999999 9999999999999999999999964 44
Q ss_pred CCCCCcccccchhhhhhhhcc
Q 026543 201 DPRLDSSYHSNADQLLSSLLG 221 (237)
Q Consensus 201 ~~~~~~~~~~~~~~~~~~~~e 221 (237)
.++..+..+..+++++.+..+
T Consensus 228 ~~n~~~~~~~~a~~v~~~~~~ 248 (261)
T 2rbk_A 228 MGQAKEDVKAAADYVTAPIDE 248 (261)
T ss_dssp CTTSCHHHHHHSSEECCCGGG
T ss_pred ecCccHHHHhhCCEEeccCch
Confidence 455555556678888888777
|
| >3dao_A Putative phosphatse; structural genomics, joint center for S genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: MSE 1PE CIT; 1.80A {Eubacterium rectale} | Back alignment and structure |
|---|
Probab=99.70 E-value=1.9e-17 Score=128.68 Aligned_cols=106 Identities=13% Similarity=0.079 Sum_probs=72.8
Q ss_pred hCCCCEEEE-eCChhhHHHHHHhhhhhhhhhcceeeeCCC--CCccCCCCCHHHHHHHHHHcCCCCCCCCcEEEEecCHH
Q 026543 108 AKGIPMCVA-TGSLARHFELKTQKHRELFSLMHHVVRGDD--PEVKQGKPSPDIFLAAAKRFEGGPIDSQEILVFEDAPS 184 (237)
Q Consensus 108 ~~g~~v~i~-s~~~~~~~~~~~~~~~gl~~~f~~~~~~~~--~~~~~~kp~~~~~~~~l~~~~~~~~~~~~~~~igD~~~ 184 (237)
...+++.++ +..........+.+. +...+..+.++.. .....+.+|+.+++.+++++| ++++++++|||+.|
T Consensus 164 ~~~~ki~i~~~~~~~~~~~~~l~~~--~~~~~~~~~s~~~~~ei~~~~~~K~~~l~~l~~~lg---i~~~e~ia~GD~~N 238 (283)
T 3dao_A 164 NDIIKFTVFHPDKCEELCTPVFIPA--WNKKAHLAAAGKEWVDCNAKGVSKWTALSYLIDRFD---LLPDEVCCFGDNLN 238 (283)
T ss_dssp SCCCEEEEECSSCHHHHHTTTHHHH--HTTTEEEEEETTTEEEEEETTCCHHHHHHHHHHHTT---CCGGGEEEEECSGG
T ss_pred cCceEEEEEcChHHHHHHHHHHHHH--hcCCEEEEEecCceEEEeeCCCcHHHHHHHHHHHhC---CCHHHEEEECCCHH
Confidence 445677777 232222222222222 2233455555431 023456778999999999999 99999999999999
Q ss_pred HHHHHHHcCCeEEEEcCCCCCcccccchhhhhhhhcc
Q 026543 185 GVLAAKNAGMSVVMVPDPRLDSSYHSNADQLLSSLLG 221 (237)
Q Consensus 185 Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~~~~e 221 (237)
|++|++.+| +.|.+++..+..+..|++++.+..|
T Consensus 239 Di~ml~~ag---~~vam~na~~~~k~~A~~v~~s~~e 272 (283)
T 3dao_A 239 DIEMLQNAG---ISYAVSNARQEVIAAAKHTCAPYWE 272 (283)
T ss_dssp GHHHHHHSS---EEEEETTSCHHHHHHSSEEECCGGG
T ss_pred HHHHHHhCC---CEEEcCCCCHHHHHhcCeECCCCCC
Confidence 999999999 6666678877777888888777654
|
| >2pq0_A Hypothetical conserved protein GK1056; hyopthetical protein, structural genomics, unknown function; 2.60A {Geobacillus kaustophilus} PDB: 2qyh_A | Back alignment and structure |
|---|
Probab=99.66 E-value=3.1e-18 Score=131.32 Aligned_cols=198 Identities=15% Similarity=0.149 Sum_probs=110.9
Q ss_pred CccEEEEecCcccccchhhHHHHHHHHHHHc---CCCCCHHHHHHhcCCChHHHHHHHHHHhCCCCCCCHHHHHHHHHHH
Q 026543 9 PITHVIFDMDGLLLDTEKFYTEVQELILARY---NKTFDWSLKAKMMGKKAIEAAQVFVEETGISDKLSAEDFLVQREET 85 (237)
Q Consensus 9 ~~~~vifD~DGTL~~~~~~~~~~~~~~~~~~---g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (237)
++|+|+||+||||+++.+.+.....++++++ |+.+.. ..|++.... ..+...+++..-...+. ......
T Consensus 2 ~~kli~~DlDGTLl~~~~~i~~~~~~al~~l~~~G~~~~~-----aTGR~~~~~-~~~~~~l~~~~~i~~nG--a~i~~~ 73 (258)
T 2pq0_A 2 GRKIVFFDIDGTLLDEQKQLPLSTIEAVRRLKQSGVYVAI-----ATGRAPFMF-EHVRKQLGIDSFVSFNG--QYVVFE 73 (258)
T ss_dssp CCCEEEECTBTTTBCTTSCCCHHHHHHHHHHHHTTCEEEE-----ECSSCGGGS-HHHHHHHTCCCEEEGGG--TEEEET
T ss_pred CceEEEEeCCCCCcCCCCccCHHHHHHHHHHHHCCCEEEE-----ECCCChHHH-HHHHHhcCCCEEEECCC--CEEEEC
Confidence 4799999999999998876666655555443 664322 234444332 23334444431000000 000000
Q ss_pred HHhhcCCCCCCccHHHHHHHHHhCCCCEEEEeCChh-------hHHHHHHhhhhh-----h-------hhhcceeeeC--
Q 026543 86 LQTLFPTSELMPGASHLIRHLHAKGIPMCVATGSLA-------RHFELKTQKHRE-----L-------FSLMHHVVRG-- 144 (237)
Q Consensus 86 ~~~~~~~~~~~~~~~~~l~~l~~~g~~v~i~s~~~~-------~~~~~~~~~~~g-----l-------~~~f~~~~~~-- 144 (237)
.+.........+.+.++++.+++.++.+.+.|+... .... ......+ + ...+..++.+
T Consensus 74 ~~~i~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~ 152 (258)
T 2pq0_A 74 GNVLYKQPLRREKVRALTEEAHKNGHPLVFMDAEKMRASIGDHPHIH-VSMASLKFAHPPVDPLYYENKDIYQALLFCRA 152 (258)
T ss_dssp TEEEEECCCCHHHHHHHHHHHHHTTCCEEEECSSCEEESSSSCHHHH-HHHHHTTCCCCCBCTTGGGGSCCCEEEECSCH
T ss_pred CEEEEEecCCHHHHHHHHHHHHhCCCeEEEEeCCcEEEecCCcHHHH-HHHHhhcCCccccccchhhccCceEEEEECCH
Confidence 000111233456777788888877777777754330 1111 0111000 0 1111111111
Q ss_pred -------------------CC-C-CccCCCCCHHHHHHHHHHcCCCCCCCCcEEEEecCHHHHHHHHHcCCeEEEEcCCC
Q 026543 145 -------------------DD-P-EVKQGKPSPDIFLAAAKRFEGGPIDSQEILVFEDAPSGVLAAKNAGMSVVMVPDPR 203 (237)
Q Consensus 145 -------------------~~-~-~~~~~kp~~~~~~~~l~~~~~~~~~~~~~~~igD~~~Di~~a~~~G~~~i~v~~~~ 203 (237)
.. . ....+..|..++..+++++| ++++++++|||+.||++|++.+|+.++ +++
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~ei~~~~~~K~~~l~~l~~~lg---i~~~~~ia~GDs~NDi~ml~~ag~~va---m~n 226 (258)
T 2pq0_A 153 EEEEPYVRNYPEFRFVRWHDVSTDVLPAGGSKAEGIRMMIEKLG---IDKKDVYAFGDGLNDIEMLSFVGTGVA---MGN 226 (258)
T ss_dssp HHHHHHHHHCTTEEEEEEETTEEEEEESSCCHHHHHHHHHHHHT---CCGGGEEEECCSGGGHHHHHHSSEEEE---ETT
T ss_pred HHHHHHHHhCCCeEEEEeCCceEEEEECCCChHHHHHHHHHHhC---CCHHHEEEECCcHHhHHHHHhCCcEEE---eCC
Confidence 10 0 12345567889999999999 999999999999999999999996544 466
Q ss_pred CCcccccchhhhhhhhcc
Q 026543 204 LDSSYHSNADQLLSSLLG 221 (237)
Q Consensus 204 ~~~~~~~~~~~~~~~~~e 221 (237)
..+..+..+++++.+..+
T Consensus 227 a~~~~k~~A~~v~~~~~~ 244 (258)
T 2pq0_A 227 AHEEVKRVADFVTKPVDK 244 (258)
T ss_dssp CCHHHHHTCSEEECCGGG
T ss_pred CcHHHHHhCCEEeCCCCc
Confidence 666666778887766554
|
| >3ewi_A N-acylneuraminate cytidylyltransferase; beta barrel, HAD-like, rossmannoid fold, nucleotidyltransferase, nucleus; 1.90A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.66 E-value=3.9e-16 Score=111.39 Aligned_cols=96 Identities=13% Similarity=0.031 Sum_probs=72.0
Q ss_pred HHHHHHhCCCCEEEEeCChhhHHHHHHhh--hhhhhhhcceeeeCCCCCccCCCCCHHHHHHHHHHcCCCCCCCCcEEEE
Q 026543 102 LIRHLHAKGIPMCVATGSLARHFELKTQK--HRELFSLMHHVVRGDDPEVKQGKPSPDIFLAAAKRFEGGPIDSQEILVF 179 (237)
Q Consensus 102 ~l~~l~~~g~~v~i~s~~~~~~~~~~~~~--~~gl~~~f~~~~~~~~~~~~~~kp~~~~~~~~l~~~~~~~~~~~~~~~i 179 (237)
.|+.|+++|++++|+||. .... ..++ .+|+ + ++.+ .++++..+..++++++ ++|++++||
T Consensus 44 ~L~~Lk~~Gi~~~I~Tg~--~~~~-~~l~~l~lgi----~-~~~g-------~~~K~~~l~~~~~~~g---i~~~~~~~v 105 (168)
T 3ewi_A 44 GISLLKKSGIEVRLISER--ACSK-QTLSALKLDC----K-TEVS-------VSDKLATVDEWRKEMG---LCWKEVAYL 105 (168)
T ss_dssp HHHHHHHTTCEEEEECSS--CCCH-HHHHTTCCCC----C-EECS-------CSCHHHHHHHHHHHTT---CCGGGEEEE
T ss_pred HHHHHHHCCCEEEEEeCc--HHHH-HHHHHhCCCc----E-EEEC-------CCChHHHHHHHHHHcC---cChHHEEEE
Confidence 688999999999999996 3333 4455 3444 2 2322 2567999999999999 999999999
Q ss_pred ecCHHHHHHHHHcCCeEEEEcCCCCCcccccchhhhhhh
Q 026543 180 EDAPSGVLAAKNAGMSVVMVPDPRLDSSYHSNADQLLSS 218 (237)
Q Consensus 180 gD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~~ 218 (237)
||+.||+++++.+|+.+ ..++..+..+..+++++.+
T Consensus 106 GD~~nDi~~~~~ag~~~---a~~na~~~~k~~Ad~v~~~ 141 (168)
T 3ewi_A 106 GNEVSDEECLKRVGLSA---VPADACSGAQKAVGYICKC 141 (168)
T ss_dssp CCSGGGHHHHHHSSEEE---ECTTCCHHHHTTCSEECSS
T ss_pred eCCHhHHHHHHHCCCEE---EeCChhHHHHHhCCEEeCC
Confidence 99999999999999663 3445554555666666554
|
| >2i33_A Acid phosphatase; HAD superfamily, hydrolase; 1.57A {Bacillus anthracis} PDB: 2i34_A | Back alignment and structure |
|---|
Probab=99.64 E-value=5.2e-16 Score=118.35 Aligned_cols=101 Identities=15% Similarity=0.219 Sum_probs=74.8
Q ss_pred CCCCCccHHHHHHHHHhCCCCEEEEeCChhhH--HHHHHhhhhhhh--hhcceeeeCCCCCccCCCCCHHHHHHHHHHcC
Q 026543 92 TSELMPGASHLIRHLHAKGIPMCVATGSLARH--FELKTQKHRELF--SLMHHVVRGDDPEVKQGKPSPDIFLAAAKRFE 167 (237)
Q Consensus 92 ~~~~~~~~~~~l~~l~~~g~~v~i~s~~~~~~--~~~~~~~~~gl~--~~f~~~~~~~~~~~~~~kp~~~~~~~~l~~~~ 167 (237)
..+++||+.++|+.|+++|++++|+||+.... .....++.+|+. .+|+.+++++ .. .||.+ ... +...+
T Consensus 99 ~~~~~pg~~e~L~~L~~~Gi~i~iaTnr~~~~~~~~~~~L~~~Gl~~v~~~~vi~~~~--~~--~K~~~--~~~-~~~~~ 171 (258)
T 2i33_A 99 EAEALPGSIDFLKYTESKGVDIYYISNRKTNQLDATIKNLERVGAPQATKEHILLQDP--KE--KGKEK--RRE-LVSQT 171 (258)
T ss_dssp CCEECTTHHHHHHHHHHTTCEEEEEEEEEGGGHHHHHHHHHHHTCSSCSTTTEEEECT--TC--CSSHH--HHH-HHHHH
T ss_pred CCCcCccHHHHHHHHHHCCCEEEEEcCCchhHHHHHHHHHHHcCCCcCCCceEEECCC--CC--CCcHH--HHH-HHHhC
Confidence 46789999999999999999999999976322 233456777887 6778887776 32 34433 333 33334
Q ss_pred CCCCCCCcEEEEecCHHHHHHHH-------H---------cCCeEEEEcCCCC
Q 026543 168 GGPIDSQEILVFEDAPSGVLAAK-------N---------AGMSVVMVPDPRL 204 (237)
Q Consensus 168 ~~~~~~~~~~~igD~~~Di~~a~-------~---------~G~~~i~v~~~~~ 204 (237)
. +.|++|||+.+|+.+|. + +|+.++.++.+..
T Consensus 172 ---~--~~~l~VGDs~~Di~aA~~~~~~~r~a~v~~~~~~aG~~~i~lpn~~y 219 (258)
T 2i33_A 172 ---H--DIVLFFGDNLSDFTGFDGKSVKDRNQAVTDSKAQFGEKFIIFPNPMY 219 (258)
T ss_dssp ---E--EEEEEEESSGGGSTTCSSCCHHHHHHHHHHTGGGBTTTEEECCCCSS
T ss_pred ---C--CceEEeCCCHHHhcccccCCHHHHHHHHHHHHHHhcCceEECCCCCc
Confidence 3 34999999999999983 4 8999999988766
|
| >3l7y_A Putative uncharacterized protein SMU.1108C; hydrolase; 2.00A {Streptococcus mutans} | Back alignment and structure |
|---|
Probab=99.63 E-value=5.1e-17 Score=127.47 Aligned_cols=79 Identities=14% Similarity=0.069 Sum_probs=62.8
Q ss_pred hcceeeeCCC--CCccCCCCCHHHHHHHHHHcCCCCCCCCcEEEEecCHHHHHHHHHcCCeEEEEcCCCCCcccccchhh
Q 026543 137 LMHHVVRGDD--PEVKQGKPSPDIFLAAAKRFEGGPIDSQEILVFEDAPSGVLAAKNAGMSVVMVPDPRLDSSYHSNADQ 214 (237)
Q Consensus 137 ~f~~~~~~~~--~~~~~~kp~~~~~~~~l~~~~~~~~~~~~~~~igD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~ 214 (237)
.++.+.++.. .....+.+|+.++..+++++| ++++++++|||+.||++|++.+| +.|.+++..+..+..|++
T Consensus 209 ~~~~~~s~~~~~ei~~~~~~K~~al~~l~~~lg---i~~~e~i~~GDs~NDi~m~~~ag---~~vam~na~~~~k~~Ad~ 282 (304)
T 3l7y_A 209 RLVGTASGFGYIDIITKGLHKGWALQQLLKRWN---FTSDHLMAFGDGGNDIEMLKLAK---YSYAMANAPKNVKAAANY 282 (304)
T ss_dssp TEEEEECSTTEEEEEETTCSHHHHHHHHHHHTT---CCGGGEEEEECSGGGHHHHHHCT---EEEECTTSCHHHHHHCSE
T ss_pred eEEEEEcCCceEEEEcCCCCHHHHHHHHHHHhC---cCHHHEEEECCCHHHHHHHHhcC---CeEEcCCcCHHHHHhccE
Confidence 3555554430 023456778999999999999 99999999999999999999999 677778887777888888
Q ss_pred hhhhhcc
Q 026543 215 LLSSLLG 221 (237)
Q Consensus 215 ~~~~~~e 221 (237)
++.+..|
T Consensus 283 v~~~~~e 289 (304)
T 3l7y_A 283 QAKSNDE 289 (304)
T ss_dssp ECCCGGG
T ss_pred EcCCCCc
Confidence 8877655
|
| >1rlm_A Phosphatase; HAD family, rossman fold, hydrolase; 1.90A {Escherichia coli} SCOP: c.108.1.10 PDB: 1rlt_A 1rlo_A* 2hf2_A | Back alignment and structure |
|---|
Probab=99.62 E-value=1.1e-16 Score=123.63 Aligned_cols=105 Identities=12% Similarity=0.035 Sum_probs=72.1
Q ss_pred hCCCCEEEEeCChhhHHHHHHhhhhh--hhhhcceeeeCCC--CCccCCCCCHHHHHHHHHHcCCCCCCCCcEEEEecCH
Q 026543 108 AKGIPMCVATGSLARHFELKTQKHRE--LFSLMHHVVRGDD--PEVKQGKPSPDIFLAAAKRFEGGPIDSQEILVFEDAP 183 (237)
Q Consensus 108 ~~g~~v~i~s~~~~~~~~~~~~~~~g--l~~~f~~~~~~~~--~~~~~~kp~~~~~~~~l~~~~~~~~~~~~~~~igD~~ 183 (237)
..++++.++++... .. .+.+.++ +...|+.+.++.. .....+++++.+++++++++| ++++++++|||+.
T Consensus 144 ~~~~ki~i~~~~~~--~~-~~~~~l~~~~~~~~~~~~s~~~~~ei~~~~~~K~~~~~~l~~~l~---i~~~~~~~~GD~~ 217 (271)
T 1rlm_A 144 DVLFKFSLNLPDEQ--IP-LVIDKLHVALDGIMKPVTSGFGFIDLIIPGLHKANGISRLLKRWD---LSPQNVVAIGDSG 217 (271)
T ss_dssp SCEEEEEEECCGGG--HH-HHHHHHHHHTTTSSEEEECSTTEEEEECTTCSHHHHHHHHHHHHT---CCGGGEEEEECSG
T ss_pred CceEEEEEEcCHHH--HH-HHHHHHHHHcCCcEEEEeccCCeEEEEcCCCChHHHHHHHHHHhC---CCHHHEEEECCcH
Confidence 34567777776322 22 2333332 3445666665520 034567899999999999999 9999999999999
Q ss_pred HHHHHHHHcCCeEEEEcCCCCCcccccchhhhhhhhcc
Q 026543 184 SGVLAAKNAGMSVVMVPDPRLDSSYHSNADQLLSSLLG 221 (237)
Q Consensus 184 ~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~~~~e 221 (237)
||++|++.+|+. |..++..+..+..+++++.+..+
T Consensus 218 nD~~m~~~ag~~---va~~na~~~~k~~a~~v~~~~~~ 252 (271)
T 1rlm_A 218 NDAEMLKMARYS---FAMGNAAENIKQIARYATDDNNH 252 (271)
T ss_dssp GGHHHHHHCSEE---EECTTCCHHHHHHCSEECCCGGG
T ss_pred HHHHHHHHcCCe---EEeCCccHHHHHhCCeeCcCCCC
Confidence 999999999964 44556554455667777666544
|
| >3r4c_A Hydrolase, haloacid dehalogenase-like hydrolase; haloalkanoate dehalogenase enzyme superfamily, phosphohydrol hydrolase; 1.82A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.61 E-value=2.9e-15 Score=115.28 Aligned_cols=67 Identities=18% Similarity=0.166 Sum_probs=57.9
Q ss_pred ccCCCCCHHHHHHHHHHcCCCCCCCCcEEEEecCHHHHHHHHHcCCeEEEEcCCCCCcccccchhhhhhhhcc
Q 026543 149 VKQGKPSPDIFLAAAKRFEGGPIDSQEILVFEDAPSGVLAAKNAGMSVVMVPDPRLDSSYHSNADQLLSSLLG 221 (237)
Q Consensus 149 ~~~~kp~~~~~~~~l~~~~~~~~~~~~~~~igD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~~~~e 221 (237)
...+.+|+.+++++++++| ++++++++|||+.||++|++.+| +.|.+++..+..+..|++++.+..|
T Consensus 189 ~~~~~~K~~~l~~l~~~lg---i~~~~~ia~GD~~NDi~m~~~ag---~~vam~na~~~~k~~Ad~v~~~~~e 255 (268)
T 3r4c_A 189 NVAGTSKATGLSLFADYYR---VKVSEIMACGDGGNDIPMLKAAG---IGVAMGNASEKVQSVADFVTDTVDN 255 (268)
T ss_dssp EETTCCHHHHHHHHHHHTT---CCGGGEEEEECSGGGHHHHHHSS---EEEECTTSCHHHHHTCSEECCCTTT
T ss_pred eeCCCCHHHHHHHHHHHcC---CCHHHEEEECCcHHhHHHHHhCC---CeEEeCCCcHHHHHhcCEeeCCCCc
Confidence 3456778999999999999 99999999999999999999999 6777888877777778888777554
|
| >3pgv_A Haloacid dehalogenase-like hydrolase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: EPE; 2.39A {Klebsiella pneumoniae subsp} | Back alignment and structure |
|---|
Probab=99.61 E-value=2.4e-16 Score=122.56 Aligned_cols=65 Identities=14% Similarity=0.085 Sum_probs=54.6
Q ss_pred ccCCCCCHHHHHHHHHHcCCCCCCCCcEEEEecCHHHHHHHHHcCCeEEEEcCCCCCcccccchhh--hhhhh
Q 026543 149 VKQGKPSPDIFLAAAKRFEGGPIDSQEILVFEDAPSGVLAAKNAGMSVVMVPDPRLDSSYHSNADQ--LLSSL 219 (237)
Q Consensus 149 ~~~~kp~~~~~~~~l~~~~~~~~~~~~~~~igD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~--~~~~~ 219 (237)
...+.+|+.+++.+++++| ++++++++|||+.||++|++.+| ++|+++++.+..+..+++ ++.+.
T Consensus 204 ~~~~~~K~~al~~l~~~lg---i~~~~~ia~GD~~NDi~ml~~ag---~~vAm~Na~~~vk~~A~~~~v~~sn 270 (285)
T 3pgv_A 204 MAGGVSKGHALEAVAKMLG---YTLSDCIAFGDGMNDAEMLSMAG---KGCIMANAHQRLKDLHPELEVIGSN 270 (285)
T ss_dssp EETTCSHHHHHHHHHHHTT---CCGGGEEEEECSGGGHHHHHHSS---EEEECTTSCHHHHHHCTTSEECCCG
T ss_pred ecCCCChHHHHHHHHHHhC---CCHHHEEEECCcHhhHHHHHhcC---CEEEccCCCHHHHHhCCCCEecccC
Confidence 3456778999999999999 99999999999999999999999 788888887776776764 44443
|
| >3kc2_A Uncharacterized protein YKR070W; HAD-like, mitochondral protein, PSI, MCSG, structural genomi protein structure initiative; HET: MSE; 1.55A {Saccharomyces cerevisiae} PDB: 3rf6_A* | Back alignment and structure |
|---|
Probab=99.59 E-value=2e-17 Score=131.33 Aligned_cols=78 Identities=15% Similarity=0.240 Sum_probs=60.8
Q ss_pred ccCCCCCHHHHHHHHHHc----------------------CC--CCCCCCcEEEEecCH-HHHHHHHHcCCeEEEEcCCC
Q 026543 149 VKQGKPSPDIFLAAAKRF----------------------EG--GPIDSQEILVFEDAP-SGVLAAKNAGMSVVMVPDPR 203 (237)
Q Consensus 149 ~~~~kp~~~~~~~~l~~~----------------------~~--~~~~~~~~~~igD~~-~Di~~a~~~G~~~i~v~~~~ 203 (237)
...+||++..|+.+++.+ |. ...++++++||||+. +|+.+|+++|+.+++|.+|.
T Consensus 242 ~~~GKP~~~~y~~A~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~VGD~~~~Di~~A~~aG~~ti~V~~G~ 321 (352)
T 3kc2_A 242 YTLGKPTKLTYDFAHHVLIDWEKRLSGKIGQSVKQKLPLLGTKPSTSPFHAVFMVGDNPASDIIGAQNYGWNSCLVKTGV 321 (352)
T ss_dssp EECSTTCHHHHHHHHHHHHHHHHHHHC--------------CCTTTTTSSEEEEEESCTTTHHHHHHHHTCEEEECSSSS
T ss_pred eEecCCCHHHHHHHHHHHHHHHHhhhcccccccccccccccccccCCCcceEEEEecCcHHHHHHHHHcCCEEEEEccCC
Confidence 457899999999876654 20 002679999999999 69999999999999999877
Q ss_pred CCcc---cccchhhhhhhhcccCCCC
Q 026543 204 LDSS---YHSNADQLLSSLLGFNPKD 226 (237)
Q Consensus 204 ~~~~---~~~~~~~~~~~~~el~~~l 226 (237)
.... ....|+++++++.|+...+
T Consensus 322 ~~~~~~~~~~~pd~vi~~l~el~~~i 347 (352)
T 3kc2_A 322 YNEGDDLKECKPTLIVNDVFDAVTKT 347 (352)
T ss_dssp CCTTCCCTTCCCSEECSSHHHHHHHH
T ss_pred CCcccccccCCCCEEECCHHHHHHHH
Confidence 6322 2467899999999886544
|
| >1l6r_A Hypothetical protein TA0175; structural genomics, putative hydrolas midwest center for structural genomics, MCSG, PSI; 1.40A {Thermoplasma acidophilum} SCOP: c.108.1.10 PDB: 1kyt_A | Back alignment and structure |
|---|
Probab=99.58 E-value=3.9e-15 Score=111.80 Aligned_cols=64 Identities=11% Similarity=0.083 Sum_probs=50.6
Q ss_pred cCCCCCHHHHHHHHHHcCCCCCCCCcEEEEecCHHHHHHHHHcCCeEEEEcCCCCCcccccchhhhhhhh
Q 026543 150 KQGKPSPDIFLAAAKRFEGGPIDSQEILVFEDAPSGVLAAKNAGMSVVMVPDPRLDSSYHSNADQLLSSL 219 (237)
Q Consensus 150 ~~~kp~~~~~~~~l~~~~~~~~~~~~~~~igD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~~~ 219 (237)
..+.+|+..++.++++++ ++++++++|||+.||++|++.+|+. |..++..+..+..+++++.+.
T Consensus 149 ~~~~~K~~~l~~l~~~~~---~~~~~~~~iGD~~nD~~m~~~ag~~---va~~n~~~~~k~~a~~v~~~~ 212 (227)
T 1l6r_A 149 NRGEDKAFAVNKLKEMYS---LEYDEILVIGDSNNDMPMFQLPVRK---ACPANATDNIKAVSDFVSDYS 212 (227)
T ss_dssp ETTCSHHHHHHHHHHHTT---CCGGGEEEECCSGGGHHHHTSSSEE---EECTTSCHHHHHHCSEECSCC
T ss_pred cCCCCHHHHHHHHHHHhC---cCHHHEEEECCcHHhHHHHHHcCce---EEecCchHHHHHhCCEEecCC
Confidence 345778999999999999 9999999999999999999999964 444555444455666666554
|
| >1ltq_A Polynucleotide kinase; phosphatase, alpha/beta, P-loop, transferase; HET: ADP; 2.33A {Enterobacteria phage T4} SCOP: c.108.1.9 c.37.1.1 PDB: 1rc8_A* 1rpz_A* 1rrc_A* 2ia5_A | Back alignment and structure |
|---|
Probab=99.55 E-value=1.2e-14 Score=113.74 Aligned_cols=101 Identities=11% Similarity=0.045 Sum_probs=83.4
Q ss_pred CCCccHHHHHHHHHhCCCCEEEEeCChhhHH--HHHHhhh--------hhhhhhcceeeeCCCCCccCCCCCHHHHHHHH
Q 026543 94 ELMPGASHLIRHLHAKGIPMCVATGSLARHF--ELKTQKH--------RELFSLMHHVVRGDDPEVKQGKPSPDIFLAAA 163 (237)
Q Consensus 94 ~~~~~~~~~l~~l~~~g~~v~i~s~~~~~~~--~~~~~~~--------~gl~~~f~~~~~~~~~~~~~~kp~~~~~~~~l 163 (237)
.++||+.++|+.|+++|++++++||...... ...+++. .|+ +|+.+++++ .. ..||+|..+..++
T Consensus 188 ~~~~g~~e~L~~L~~~g~~~~v~T~k~~~~~~~~~~~l~~~~~~~~~~~~~--~~~~~~~~~--~~-~~kp~p~~~~~~~ 262 (301)
T 1ltq_A 188 VINPMVVELSKMYALMGYQIVVVSGRESGTKEDPTKYYRMTRKWVEDIAGV--PLVMQCQRE--QG-DTRKDDVVKEEIF 262 (301)
T ss_dssp CBCHHHHHHHHHHHHTTCEEEEEECSCCCCSSSTTHHHHHHHHHHHHTTCC--CCSEEEECC--TT-CCSCHHHHHHHHH
T ss_pred CCChHHHHHHHHHHHCCCeEEEEeCCCcccchhHHHHHHhcccccccccCC--Cchheeecc--CC-CCcHHHHHHHHHH
Confidence 4589999999999999999999999764321 1234555 677 588888876 43 4689999999999
Q ss_pred HHcCCCCCCCCc-EEEEecCHHHHHHHHHcCCeEEEEcCC
Q 026543 164 KRFEGGPIDSQE-ILVFEDAPSGVLAAKNAGMSVVMVPDP 202 (237)
Q Consensus 164 ~~~~~~~~~~~~-~~~igD~~~Di~~a~~~G~~~i~v~~~ 202 (237)
++++ .++.+ ++||||+.+|+++|+++|+.+++|.+|
T Consensus 263 ~~~~---~~~~~~~~~vgD~~~di~~a~~aG~~~~~v~~G 299 (301)
T 1ltq_A 263 WKHI---APHFDVKLAIDDRTQVVEMWRRIGVECWQVASG 299 (301)
T ss_dssp HHHT---TTTCEEEEEEECCHHHHHHHHHTTCCEEECSCC
T ss_pred HHHh---ccccceEEEeCCcHHHHHHHHHcCCeEEEecCC
Confidence 9998 77655 799999999999999999999999887
|
| >1nrw_A Hypothetical protein, haloacid dehalogenase-like hydrolase; structural genomics, PSI, protein structure initiative; 1.70A {Bacillus subtilis} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=99.52 E-value=1e-15 Score=119.09 Aligned_cols=65 Identities=17% Similarity=0.083 Sum_probs=49.8
Q ss_pred CCCCCHHHHHHHHHHcCCCCCCCCcEEEEecCHHHHHHHHHcCCeEEEEcCCCCCcccccchhhhhhhhcc
Q 026543 151 QGKPSPDIFLAAAKRFEGGPIDSQEILVFEDAPSGVLAAKNAGMSVVMVPDPRLDSSYHSNADQLLSSLLG 221 (237)
Q Consensus 151 ~~kp~~~~~~~~l~~~~~~~~~~~~~~~igD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~~~~e 221 (237)
.+..|..++..+++++| ++++++++|||+.||++|++.+|+ .+.+ ++..+..+..+++++.+..+
T Consensus 213 ~~~~K~~~~~~~~~~~~---~~~~~~~~~GD~~nD~~m~~~ag~-~va~--~~~~~~~~~~a~~v~~~~~~ 277 (288)
T 1nrw_A 213 RKASKGQALKRLAKQLN---IPLEETAAVGDSLNDKSMLEAAGK-GVAM--GNAREDIKSIADAVTLTNDE 277 (288)
T ss_dssp TTCSHHHHHHHHHHHTT---CCGGGEEEEESSGGGHHHHHHSSE-EEEC--TTCCHHHHHHCSEECCCGGG
T ss_pred CCCChHHHHHHHHHHhC---CCHHHEEEEcCCHHHHHHHHHcCc-EEEE--cCCCHHHHhhCceeecCCCc
Confidence 34467888999999999 999999999999999999999996 3333 45544445556776665443
|
| >1rkq_A Hypothetical protein YIDA; two domain structure with beta-alpha sandwich. stucture contains A magnesium ION., PSI, protein structure initiative; 1.40A {Escherichia coli} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=99.46 E-value=4.7e-15 Score=115.02 Aligned_cols=66 Identities=18% Similarity=0.116 Sum_probs=52.3
Q ss_pred cCCCCCHHHHHHHHHHcCCCCCCCCcEEEEecCHHHHHHHHHcCCeEEEEcCCCCCcccccchhhhhhhhcc
Q 026543 150 KQGKPSPDIFLAAAKRFEGGPIDSQEILVFEDAPSGVLAAKNAGMSVVMVPDPRLDSSYHSNADQLLSSLLG 221 (237)
Q Consensus 150 ~~~kp~~~~~~~~l~~~~~~~~~~~~~~~igD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~~~~e 221 (237)
..+.+++.++..+++++| ++++++++|||+.||++|++.+|+ .|..++..+..+..+++++.+..+
T Consensus 194 ~~~~~K~~~l~~l~~~~~---~~~~~~~~~GD~~nD~~m~~~ag~---~va~~n~~~~~~~~a~~v~~~~~~ 259 (282)
T 1rkq_A 194 DKRVNKGTGVKSLADVLG---IKPEEIMAIGDQENDIAMIEYAGV---GVAVDNAIPSVKEVANFVTKSNLE 259 (282)
T ss_dssp ETTCSHHHHHHHHHHHHT---CCGGGEEEEECSGGGHHHHHHSSE---EEECTTSCHHHHHHCSEECCCTTT
T ss_pred CCCCCCHHHHHHHHHHhC---CCHHHEEEECCcHHHHHHHHHCCc---EEEecCCcHHHHhhCCEEecCCCc
Confidence 455678999999999999 999999999999999999999995 455555544445567777666443
|
| >1nf2_A Phosphatase; structural proteomics, HAD NEW fold, structural genomics, BSGC structure funded by NIH structure initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=99.46 E-value=1.9e-14 Score=110.77 Aligned_cols=65 Identities=15% Similarity=0.164 Sum_probs=51.8
Q ss_pred cCCCCCHHHHHHHHHHcCCCCCCCCcEEEEecCHHHHHHHHHcCCeEEEEcCCCCCcccccchhhhhhhhc
Q 026543 150 KQGKPSPDIFLAAAKRFEGGPIDSQEILVFEDAPSGVLAAKNAGMSVVMVPDPRLDSSYHSNADQLLSSLL 220 (237)
Q Consensus 150 ~~~kp~~~~~~~~l~~~~~~~~~~~~~~~igD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~~~~ 220 (237)
..+.+|+.++..+++++| ++++++++|||+.||++|++.+|+ .|..++..+..+..+++++.+..
T Consensus 186 ~~~~~K~~~~~~~~~~~~---~~~~~~~~~GD~~nD~~~~~~ag~---~v~~~n~~~~~~~~a~~v~~~~~ 250 (268)
T 1nf2_A 186 PKNVDKGKALRFLRERMN---WKKEEIVVFGDNENDLFMFEEAGL---RVAMENAIEKVKEASDIVTLTNN 250 (268)
T ss_dssp CTTCCHHHHHHHHHHHHT---CCGGGEEEEECSHHHHHHHTTCSE---EEECTTSCHHHHHHCSEECCCTT
T ss_pred CCCCChHHHHHHHHHHcC---CCHHHeEEEcCchhhHHHHHHcCC---EEEecCCCHHHHhhCCEEEccCC
Confidence 345678999999999999 999999999999999999999996 45556554444555777766543
|
| >1y8a_A Hypothetical protein AF1437; structural genomics, protein structu initiative, PSI, midwest center for structural genomics; 1.40A {Archaeoglobus fulgidus} SCOP: c.108.1.24 | Back alignment and structure |
|---|
Probab=99.41 E-value=1.8e-14 Score=114.33 Aligned_cols=111 Identities=13% Similarity=0.124 Sum_probs=66.8
Q ss_pred CCCCccHHHHHHHHHhCCCCEEEEeCChhhHHHHHHhhhhhhhhhcceeeeCCCCCc-------------------cCCC
Q 026543 93 SELMPGASHLIRHLHAKGIPMCVATGSLARHFELKTQKHRELFSLMHHVVRGDDPEV-------------------KQGK 153 (237)
Q Consensus 93 ~~~~~~~~~~l~~l~~~g~~v~i~s~~~~~~~~~~~~~~~gl~~~f~~~~~~~~~~~-------------------~~~k 153 (237)
..+.+++.++++.|++ |+.++++|+....... ...+..++ ++.+.+... .. ...+
T Consensus 102 ~~~~~~~~~~l~~l~~-g~~~~i~t~~~~~~~~-~~~~~~~~---~~~~~~~~~-~~~~~~~~~~~~k~~~~~~~~~~~~ 175 (332)
T 1y8a_A 102 AKFVPDAEKAMATLQE-RWTPVVISTSYTQYLR-RTASMIGV---RGELHGTEV-DFDSIAVPEGLREELLSIIDVIASL 175 (332)
T ss_dssp CCBCTTHHHHHHHHHT-TCEEEEEEEEEHHHHH-HHHHHTTC---CSEEEEEBC-CGGGCCCCHHHHHHHHHHHHHHHHC
T ss_pred CCCHHHHHHHHHHHHc-CCcEEEEECCceEEEc-ccchhhhh---hhhhccccc-chhhhccccccceeEEecCHHHHhh
Confidence 4678999999999999 9999999985533333 33443343 222222110 00 0001
Q ss_pred CC---------------HHHHH------------HHHHHcCCCCCCCCc----EEEEecCHHHHHHHHHc----CCeEEE
Q 026543 154 PS---------------PDIFL------------AAAKRFEGGPIDSQE----ILVFEDAPSGVLAAKNA----GMSVVM 198 (237)
Q Consensus 154 p~---------------~~~~~------------~~l~~~~~~~~~~~~----~~~igD~~~Di~~a~~~----G~~~i~ 198 (237)
+. +..+. ..++ + +++++ +++|||+.||++|++.+ |+.+++
T Consensus 176 ~~~~~l~~~~~~~~~s~~~~~~e~ii~~~g~~K~~al~--g---i~~~~~~~~via~GDs~NDi~ml~~A~~~~g~~vam 250 (332)
T 1y8a_A 176 SGEELFRKLDELFSRSEVRKIVESVKAVGAGEKAKIMR--G---YCESKGIDFPVVVGDSISDYKMFEAARGLGGVAIAF 250 (332)
T ss_dssp CHHHHHHHHHHHHHSHHHHHHHHTCBCCCHHHHHHHHH--H---HHHHHTCSSCEEEECSGGGHHHHHHHHHTTCEEEEE
T ss_pred hhHHHHHHHHHHHhhcCCCceeeEEecCCCCCHHHHHh--c---cChhhcCceEEEEeCcHhHHHHHHHHhhcCCeEEEe
Confidence 10 11111 2222 6 77888 99999999999999999 976443
Q ss_pred EcCCCCCcccccchhhhhhh
Q 026543 199 VPDPRLDSSYHSNADQLLSS 218 (237)
Q Consensus 199 v~~~~~~~~~~~~~~~~~~~ 218 (237)
+..+..+..|++++.+
T Consensus 251 ----na~~~lk~~Ad~v~~~ 266 (332)
T 1y8a_A 251 ----NGNEYALKHADVVIIS 266 (332)
T ss_dssp ----SCCHHHHTTCSEEEEC
T ss_pred ----cCCHHHHhhCcEEecC
Confidence 3333445566666655
|
| >3ocu_A Lipoprotein E; hydrolase, outer membrane; HET: NMN; 1.35A {Haemophilus influenzae} PDB: 3ocv_A* 3ocw_A* 3ocx_A* 3ocz_A* 3ocy_A* 3sf0_A* 2hlk_A 2hll_A 3et4_A 3et5_A | Back alignment and structure |
|---|
Probab=99.37 E-value=6.5e-12 Score=94.92 Aligned_cols=102 Identities=13% Similarity=0.160 Sum_probs=72.6
Q ss_pred CCCCCccHHHHHHHHHhCCCCEEEEeCChhh---HHHHHHhhhhhhhhhcc-eeeeCCCCCccCCCCCHHHHHHHHHHcC
Q 026543 92 TSELMPGASHLIRHLHAKGIPMCVATGSLAR---HFELKTQKHRELFSLMH-HVVRGDDPEVKQGKPSPDIFLAAAKRFE 167 (237)
Q Consensus 92 ~~~~~~~~~~~l~~l~~~g~~v~i~s~~~~~---~~~~~~~~~~gl~~~f~-~~~~~~~~~~~~~kp~~~~~~~~l~~~~ 167 (237)
..+++||+.++++.|+++|++++++||.... ......++..|+..+++ .++... . ...+...+..+.++ |
T Consensus 99 ~~~~~pG~~ell~~L~~~G~ki~ivTgR~~~~~r~~T~~~L~~lGi~~~~~~~Lilr~--~---~~~K~~~r~~l~~~-G 172 (262)
T 3ocu_A 99 QSRAVPGAVEFNNYVNSHNGKVFYVTNRKDSTEKSGTIDDMKRLGFNGVEESAFYLKK--D---KSAKAARFAEIEKQ-G 172 (262)
T ss_dssp CCEECTTHHHHHHHHHHTTEEEEEEEEEETTTTHHHHHHHHHHHTCSCCSGGGEEEES--S---CSCCHHHHHHHHHT-T
T ss_pred CCCCCccHHHHHHHHHHCCCeEEEEeCCCccchHHHHHHHHHHcCcCcccccceeccC--C---CCChHHHHHHHHhc-C
Confidence 4789999999999999999999999997653 45556678888877663 444333 2 13345555555554 4
Q ss_pred CCCCCCCcEEEEecCHHHHHHH--------H---------HcCCeEEEEcCCCC
Q 026543 168 GGPIDSQEILVFEDAPSGVLAA--------K---------NAGMSVVMVPDPRL 204 (237)
Q Consensus 168 ~~~~~~~~~~~igD~~~Di~~a--------~---------~~G~~~i~v~~~~~ 204 (237)
.. -+++|||..+|+.++ + ..|.+.|.++.+..
T Consensus 173 ---y~--iv~~vGD~~~Dl~~~~~~~~~~~r~a~v~~~~~~fG~~~ivlPNp~Y 221 (262)
T 3ocu_A 173 ---YE--IVLYVGDNLDDFGNTVYGKLNADRRAFVDQNQGKFGKTFIMLPNANY 221 (262)
T ss_dssp ---EE--EEEEEESSGGGGCSTTTTCCHHHHHHHHHHTGGGBTTTEEECCCSSC
T ss_pred ---CC--EEEEECCChHHhccccccCCHHHHHHHHHHHHHHhCCCEEEeCCCCc
Confidence 32 499999999999972 2 25777787777665
|
| >2b30_A Pvivax hypothetical protein; SGPP, structural genomics, PSI, protein structure initiative; 2.70A {Plasmodium vivax} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=99.37 E-value=5.2e-14 Score=110.11 Aligned_cols=64 Identities=22% Similarity=0.192 Sum_probs=51.1
Q ss_pred cCCCCCHHHHHHHHHHcCCCCCCCCcEEEEecCHHHHHHHHHcCCeEEEEcCCCCCcccccchhhhhh-hh
Q 026543 150 KQGKPSPDIFLAAAKRFEGGPIDSQEILVFEDAPSGVLAAKNAGMSVVMVPDPRLDSSYHSNADQLLS-SL 219 (237)
Q Consensus 150 ~~~kp~~~~~~~~l~~~~~~~~~~~~~~~igD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~-~~ 219 (237)
..+.+++.++..+++++| ++++++++|||+.||++|++.+|+ .|..++..+..+..+++++. +.
T Consensus 220 ~~~~~K~~~l~~l~~~~~---~~~~~~~~~GD~~nD~~m~~~ag~---~va~~na~~~~k~~a~~v~~~~~ 284 (301)
T 2b30_A 220 KLGHDKYTGINYLLKHYN---ISNDQVLVVGDAENDIAMLSNFKY---SFAVANATDSAKSHAKCVLPVSH 284 (301)
T ss_dssp ETTCCHHHHHHHHHHHTT---CCGGGEEEEECSGGGHHHHHSCSE---EEECTTCCHHHHHHSSEECSSCT
T ss_pred CCCCCcHHHHHHHHHHcC---CCHHHEEEECCCHHHHHHHHHcCC---eEEEcCCcHHHHhhCCEEEccCC
Confidence 456678999999999999 999999999999999999999996 44455554444556676665 43
|
| >3zx4_A MPGP, mannosyl-3-phosphoglycerate phosphatase; hydrolase, haloalkanoid acid dehalogenase-like phosphatase, crystallographic snapshot; HET: 2M8; 1.74A {Thermus thermophilus} PDB: 3zty_A 3zu6_A* 3ztw_A* 3zw7_A* 3zwd_A* 3zwk_A 3zup_A* 3zx5_A* | Back alignment and structure |
|---|
Probab=99.36 E-value=1.2e-14 Score=111.33 Aligned_cols=48 Identities=8% Similarity=-0.060 Sum_probs=42.2
Q ss_pred CCCHHHHHHHHHHcCCCCCCC--CcEEEEecCHHHHHHHHHcCCeEEEEcCCCCCc
Q 026543 153 KPSPDIFLAAAKRFEGGPIDS--QEILVFEDAPSGVLAAKNAGMSVVMVPDPRLDS 206 (237)
Q Consensus 153 kp~~~~~~~~l~~~~~~~~~~--~~~~~igD~~~Di~~a~~~G~~~i~v~~~~~~~ 206 (237)
++|+.+++++++++| +++ +++++|||+.||++|++.+| +.|..++..+
T Consensus 175 ~~K~~~l~~l~~~~~---i~~~~~~~~~~GD~~nD~~m~~~ag---~~va~~na~~ 224 (259)
T 3zx4_A 175 ADKGRAVARLRALWP---DPEEARFAVGLGDSLNDLPLFRAVD---LAVYVGRGDP 224 (259)
T ss_dssp CCHHHHHHHHHHTCS---SHHHHTSEEEEESSGGGHHHHHTSS---EEEECSSSCC
T ss_pred CCHHHHHHHHHHHhC---CCCCCceEEEEeCCHHHHHHHHhCC---CeEEeCChhh
Confidence 788999999999999 999 99999999999999999999 4455555544
|
| >2jc9_A Cytosolic purine 5'-nucleotidase; cytosolic 5-prime nucleotidase II, GMP-IMP specific nucleotidase, CN-II, NT5C2, hydrolase, polymorphism; HET: ADN; 1.5A {Homo sapiens} PDB: 2j2c_A* 2xje_A* 2xjf_A* 2jcm_A* 2xcw_A* 2xcv_A* 2xcx_A 2xjb_A* 2xjc_A* 2xjd_A* | Back alignment and structure |
|---|
Probab=99.36 E-value=9.2e-12 Score=102.23 Aligned_cols=99 Identities=15% Similarity=0.079 Sum_probs=79.9
Q ss_pred CCCCccHHHHHHHHHhCCCCEEEEeCChhhHHHHHHhhhh-h-------------hhhhcceeeeCCCCCccCCCCCHHH
Q 026543 93 SELMPGASHLIRHLHAKGIPMCVATGSLARHFELKTQKHR-E-------------LFSLMHHVVRGDDPEVKQGKPSPDI 158 (237)
Q Consensus 93 ~~~~~~~~~~l~~l~~~g~~v~i~s~~~~~~~~~~~~~~~-g-------------l~~~f~~~~~~~~~~~~~~kp~~~~ 158 (237)
+...|.+...|..+++.| +++++||+....+.. +++.+ | +.++||.|+... .||....
T Consensus 245 v~kdp~l~~~L~~Lr~~G-KlfLiTNS~~~yv~~-~m~yllg~~~~~~~~~~~~dWrdlFD~vI~~A------~KP~FF~ 316 (555)
T 2jc9_A 245 VVKDGKLPLLLSRMKEVG-KVFLATNSDYKYTDK-IMTYLFDFPHGPKPGSSHRPWQSYFDLILVDA------RKPLFFG 316 (555)
T ss_dssp BCCCTHHHHHHHHHHHHS-EEEEECSSCHHHHHH-HHHHHTCSSSSSSTTSCCCCGGGGCSEEEESC------CTTGGGT
T ss_pred cCCChHHHHHHHHHHHcC-CEEEEeCCChHHHHH-HHHHhcCCCccccccccccchhhhCCEEEEeC------CCCCccc
Confidence 567789999999999999 999999988776553 45544 5 678899977554 2332222
Q ss_pred ----------------------------------HHHHHHHcCCCCCCCCcEEEEecCH-HHHHHHH-HcCCeEEEEcCC
Q 026543 159 ----------------------------------FLAAAKRFEGGPIDSQEILVFEDAP-SGVLAAK-NAGMSVVMVPDP 202 (237)
Q Consensus 159 ----------------------------------~~~~l~~~~~~~~~~~~~~~igD~~-~Di~~a~-~~G~~~i~v~~~ 202 (237)
+..+++.+| +.+++++||||.. +||..++ .+||.|++|..-
T Consensus 317 ~~~pfr~Vd~~tg~l~~~~~~~~l~~g~vY~gGn~~~~~~llg---~~g~eVLYVGDhIftDIl~~kk~~GWrTiLViPE 393 (555)
T 2jc9_A 317 EGTVLRQVDTKTGKLKIGTYTGPLQHGIVYSGGSSDTICDLLG---AKGKDILYIGDHIFGDILKSKKRQGWRTFLVIPE 393 (555)
T ss_dssp TCCCEEEEETTTTEECSSCCCSCCCTTCCEEECCHHHHHHHHT---CCGGGEEEEESCCCCCCHHHHHHHCCEEEEECTT
T ss_pred CCCcceEeecCCCccccccccccccCCceeccCCHHHHHHHhC---CCCCeEEEECCEehHhHHhHHhhcCeEEEEEEec
Confidence 588999999 9999999999999 9999997 899999999764
|
| >3pct_A Class C acid phosphatase; hydrolase, outer membrane; 1.85A {Pasteurella multocida} | Back alignment and structure |
|---|
Probab=99.33 E-value=2e-11 Score=92.17 Aligned_cols=102 Identities=13% Similarity=0.205 Sum_probs=71.1
Q ss_pred CCCCCccHHHHHHHHHhCCCCEEEEeCChhh---HHHHHHhhhhhhhhhcc-eeeeCCCCCccCCCCCHHHHHHHHHHcC
Q 026543 92 TSELMPGASHLIRHLHAKGIPMCVATGSLAR---HFELKTQKHRELFSLMH-HVVRGDDPEVKQGKPSPDIFLAAAKRFE 167 (237)
Q Consensus 92 ~~~~~~~~~~~l~~l~~~g~~v~i~s~~~~~---~~~~~~~~~~gl~~~f~-~~~~~~~~~~~~~kp~~~~~~~~l~~~~ 167 (237)
..+++||+.++++.|+++|++++++||.... ......++.+|+..+++ .++... . ++........+++.+
T Consensus 99 ~~~~~pg~~ell~~L~~~G~~i~ivTgR~~~~~r~~T~~~L~~lGi~~~~~~~Lilr~--~----~~~K~~~r~~L~~~g 172 (260)
T 3pct_A 99 QSAAIPGAVEFSNYVNANGGTMFFVSNRRDDVEKAGTVDDMKRLGFTGVNDKTLLLKK--D----KSNKSVRFKQVEDMG 172 (260)
T ss_dssp CCEECTTHHHHHHHHHHTTCEEEEEEEEETTTSHHHHHHHHHHHTCCCCSTTTEEEES--S----CSSSHHHHHHHHTTT
T ss_pred CCCCCccHHHHHHHHHHCCCeEEEEeCCCccccHHHHHHHHHHcCcCccccceeEecC--C----CCChHHHHHHHHhcC
Confidence 4789999999999999999999999997653 34556678888877664 344332 1 122233444444444
Q ss_pred CCCCCCCcEEEEecCHHHHHH--------HHH---------cCCeEEEEcCCCC
Q 026543 168 GGPIDSQEILVFEDAPSGVLA--------AKN---------AGMSVVMVPDPRL 204 (237)
Q Consensus 168 ~~~~~~~~~~~igD~~~Di~~--------a~~---------~G~~~i~v~~~~~ 204 (237)
. .-+++|||+.+|+.+ +++ .|.+.|.++.+..
T Consensus 173 ---y--~iv~~iGD~~~Dl~~~~~~~~~~~r~a~v~~~~~~fG~~~ivlPNp~Y 221 (260)
T 3pct_A 173 ---Y--DIVLFVGDNLNDFGDATYKKSNAERRDFVAKNSKAFGKKFIVLPNTQY 221 (260)
T ss_dssp ---C--EEEEEEESSGGGGCGGGTTCCHHHHHHHHHHTGGGBTTTEEECCCCSC
T ss_pred ---C--CEEEEECCChHHcCcccccCCHHHHHHHHHHHHHHhCCCEEEeCCCCc
Confidence 3 249999999999998 333 5777777776655
|
| >2hhl_A CTD small phosphatase-like protein; CTD phosphatase, keggins anion, structural genomics, PSI, protein structure initiative; HET: KEG; 2.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.13 E-value=2.6e-12 Score=93.69 Aligned_cols=97 Identities=8% Similarity=0.164 Sum_probs=82.7
Q ss_pred CCCCccHHHHHHHHHhCCCCEEEEeCChhhHHHHHHhhhhhhhhhcceeeeCCCCCccCCCCCHHHHHHHHHHcCCCCCC
Q 026543 93 SELMPGASHLIRHLHAKGIPMCVATGSLARHFELKTQKHRELFSLMHHVVRGDDPEVKQGKPSPDIFLAAAKRFEGGPID 172 (237)
Q Consensus 93 ~~~~~~~~~~l~~l~~~g~~v~i~s~~~~~~~~~~~~~~~gl~~~f~~~~~~~~~~~~~~kp~~~~~~~~l~~~~~~~~~ 172 (237)
+..+||+.++|+.+++. +.++|+|++...+.. .+++.+++..+|+.+++.+ +....| ..|.+.++++| .+
T Consensus 67 v~~RPgv~efL~~l~~~-~~i~I~Tss~~~~a~-~vl~~ld~~~~f~~~l~rd--~~~~~k---~~~lK~L~~Lg---~~ 136 (195)
T 2hhl_A 67 VLKRPHVDEFLQRMGQL-FECVLFTASLAKYAD-PVADLLDRWGVFRARLFRE--SCVFHR---GNYVKDLSRLG---RE 136 (195)
T ss_dssp EEECTTHHHHHHHHHHH-SEEEEECSSCHHHHH-HHHHHHCCSSCEEEEECGG--GCEEET---TEEECCGGGSS---SC
T ss_pred EEeCcCHHHHHHHHHcC-CeEEEEcCCCHHHHH-HHHHHhCCcccEEEEEEcc--cceecC---CceeeeHhHhC---CC
Confidence 56899999999999998 999999997776655 5788889989999999887 554444 45778899999 99
Q ss_pred CCcEEEEecCHHHHHHHHHcCCeEEEE
Q 026543 173 SQEILVFEDAPSGVLAAKNAGMSVVMV 199 (237)
Q Consensus 173 ~~~~~~igD~~~Di~~a~~~G~~~i~v 199 (237)
+++|++|||+..++.++..+|+.+..+
T Consensus 137 ~~~~vivDDs~~~~~~~~~ngi~i~~~ 163 (195)
T 2hhl_A 137 LSKVIIVDNSPASYIFHPENAVPVQSW 163 (195)
T ss_dssp GGGEEEEESCGGGGTTCGGGEEECCCC
T ss_pred hhHEEEEECCHHHhhhCccCccEEeee
Confidence 999999999999999999999765444
|
| >4fe3_A Cytosolic 5'-nucleotidase 3; substrate complex, HAD-like, protein binding; HET: U5P; 1.74A {Mus musculus} PDB: 2g09_A* 2bdu_A* 2g08_A 2g06_A* 2g0a_A* 2q4t_A* 2g07_A* 2jga_A 2vkq_A 2cn1_A | Back alignment and structure |
|---|
Probab=99.11 E-value=1.4e-10 Score=90.47 Aligned_cols=107 Identities=13% Similarity=0.122 Sum_probs=66.1
Q ss_pred CCCCCccHHHHHHHHHhCCCCEEEEeCChhhHHHHHHhhhhhhhhhcceeeeCC----CC--------C--ccCCCCCHH
Q 026543 92 TSELMPGASHLIRHLHAKGIPMCVATGSLARHFELKTQKHRELFSLMHHVVRGD----DP--------E--VKQGKPSPD 157 (237)
Q Consensus 92 ~~~~~~~~~~~l~~l~~~g~~v~i~s~~~~~~~~~~~~~~~gl~~~f~~~~~~~----~~--------~--~~~~kp~~~ 157 (237)
..++.||+.++++.|+++|++++++|++... +...+++.+|+......+++.. +. . ....|+.+.
T Consensus 139 ~i~l~~g~~e~i~~l~~~gi~v~ivSgg~~~-~i~~i~~~~g~~~~~~~i~~n~l~~~~~~~~~~~~~~~i~~~~k~~~~ 217 (297)
T 4fe3_A 139 DVMLKEGYENFFGKLQQHGIPVFIFSAGIGD-VLEEVIRQAGVYHSNVKVVSNFMDFDENGVLKGFKGELIHVFNKHDGA 217 (297)
T ss_dssp CCCBCBTHHHHHHHHHHTTCCEEEEEEEEHH-HHHHHHHHTTCCCTTEEEEEECEEECTTSBEEEECSSCCCTTCHHHHH
T ss_pred CCCCCCcHHHHHHHHHHcCCeEEEEeCCcHH-HHHHHHHHcCCCcccceEEeeeEEEcccceeEeccccccchhhcccHH
Confidence 4789999999999999999999999996665 4446777777643322233211 00 0 011222222
Q ss_pred HHHHHHHHcCCCCCCCCcEEEEecCHHHHHHHHHcCCeEEEEcCC
Q 026543 158 IFLAAAKRFEGGPIDSQEILVFEDAPSGVLAAKNAGMSVVMVPDP 202 (237)
Q Consensus 158 ~~~~~l~~~~~~~~~~~~~~~igD~~~Di~~a~~~G~~~i~v~~~ 202 (237)
.......++. -...+++++||+.||+.|++.+.-.-++++.|
T Consensus 218 ~k~~~~~~~~---~~~~~v~~vGDGiNDa~m~k~l~~advgiaiG 259 (297)
T 4fe3_A 218 LKNTDYFSQL---KDNSNIILLGDSQGDLRMADGVANVEHILKIG 259 (297)
T ss_dssp HTCHHHHHHT---TTCCEEEEEESSGGGGGTTTTCSCCSEEEEEE
T ss_pred HHHHHHHHhh---ccCCEEEEEeCcHHHHHHHhCccccCeEEEEE
Confidence 1112223333 35678999999999999987543333444444
|
| >4gxt_A A conserved functionally unknown protein; structural genomics, PSI-biology; 1.82A {Anaerococcus prevotii} | Back alignment and structure |
|---|
Probab=99.09 E-value=1.3e-08 Score=81.73 Aligned_cols=120 Identities=10% Similarity=0.010 Sum_probs=74.4
Q ss_pred CCHHHHHHHHHHHHHhhcCC--------------------------CCCCccHHHHHHHHHhCCCCEEEEeCChhhHHHH
Q 026543 73 LSAEDFLVQREETLQTLFPT--------------------------SELMPGASHLIRHLHAKGIPMCVATGSLARHFEL 126 (237)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~~--------------------------~~~~~~~~~~l~~l~~~g~~v~i~s~~~~~~~~~ 126 (237)
.+.+++....+.......+. +.++|+++++++.|+++|++++|+|++....+.
T Consensus 174 mT~~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~v~~~~~~gir~~p~~~eLi~~L~~~G~~v~IVSgg~~~~v~- 252 (385)
T 4gxt_A 174 YKTEEVYDLCKGAYASMKKERIRVEEFVSPDIKSEAGRISIKYFVGIRTLDEMVDLYRSLEENGIDCYIVSASFIDIVR- 252 (385)
T ss_dssp CCHHHHHHHHHHHHHHHTTSCCEEEEEECCSSCCSSCCCEEEEEECCEECHHHHHHHHHHHHTTCEEEEEEEEEHHHHH-
T ss_pred CCHHHHHHHHHHHHHhccccccCceeeecccccccCceeEEeeccCceeCHHHHHHHHHHHHCCCeEEEEcCCcHHHHH-
Confidence 66788888777776654331 236999999999999999999999997665444
Q ss_pred HHhhhhhhhhh--cceeeeCC-----CC-----Cc-cCCCCCHHHHHHHHHHcCCCCCCCCcEEEEecCHHHHHHHHHcC
Q 026543 127 KTQKHRELFSL--MHHVVRGD-----DP-----EV-KQGKPSPDIFLAAAKRFEGGPIDSQEILVFEDAPSGVLAAKNAG 193 (237)
Q Consensus 127 ~~~~~~gl~~~--f~~~~~~~-----~~-----~~-~~~kp~~~~~~~~l~~~~~~~~~~~~~~~igD~~~Di~~a~~~G 193 (237)
.+.+.+|+.-. -+.|++.. +. .. ..+..........++++-........++++|||.+|++|.+..+
T Consensus 253 ~ia~~lg~~y~ip~~~Vig~~l~~~~dG~~tg~~~~~~p~~~~~gK~~~i~~~~~~~~~~~~i~a~GDs~~D~~ML~~~~ 332 (385)
T 4gxt_A 253 AFATDTNNNYKMKEEKVLGLRLMKDDEGKILPKFDKDFPISIREGKVQTINKLIKNDRNYGPIMVGGDSDGDFAMLKEFD 332 (385)
T ss_dssp HHHHCTTSSCCCCGGGEEEECEEECTTCCEEEEECTTSCCCSTHHHHHHHHHHTCCTTEECCSEEEECSGGGHHHHHHCT
T ss_pred HHHHHhCcccCCCcceEEEeEEEEecCCceeeeecCccceeCCCchHHHHHHHHHhcCCCCcEEEEECCHhHHHHHhcCc
Confidence 67776654211 12232211 00 00 00112233344444433100144567999999999999999853
|
| >2ght_A Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1; protein-peptide complex, HAD superfamily, hydrolase; HET: SEP; 1.80A {Homo sapiens} PDB: 2ghq_A* 3pgl_A* 1t9z_A* 1ta0_A* 3l0c_A 3l0y_A 3l0b_A* 2q5e_A | Back alignment and structure |
|---|
Probab=99.01 E-value=1.7e-11 Score=88.44 Aligned_cols=94 Identities=11% Similarity=0.200 Sum_probs=80.0
Q ss_pred CCCCccHHHHHHHHHhCCCCEEEEeCChhhHHHHHHhhhhhhhhhcceeeeCCCCCccCCCCCHHHHHHHHHHcCCCCCC
Q 026543 93 SELMPGASHLIRHLHAKGIPMCVATGSLARHFELKTQKHRELFSLMHHVVRGDDPEVKQGKPSPDIFLAAAKRFEGGPID 172 (237)
Q Consensus 93 ~~~~~~~~~~l~~l~~~g~~v~i~s~~~~~~~~~~~~~~~gl~~~f~~~~~~~~~~~~~~kp~~~~~~~~l~~~~~~~~~ 172 (237)
+..+||+.++|+.+++. +.++|+|++...+.. .+++.++...+|+.+++.+ +....| ..+.+.++++| .+
T Consensus 54 v~~rPg~~efL~~l~~~-~~i~I~T~~~~~~a~-~vl~~ld~~~~f~~~~~rd--~~~~~k---~~~~k~L~~Lg---~~ 123 (181)
T 2ght_A 54 VLKRPHVDEFLQRMGEL-FECVLFTASLAKYAD-PVADLLDKWGAFRARLFRE--SCVFHR---GNYVKDLSRLG---RD 123 (181)
T ss_dssp EEECTTHHHHHHHHHHH-SEEEEECSSCHHHHH-HHHHHHCTTCCEEEEECGG--GSEEET---TEEECCGGGTC---SC
T ss_pred EEeCCCHHHHHHHHHhC-CCEEEEcCCCHHHHH-HHHHHHCCCCcEEEEEecc--CceecC---CcEeccHHHhC---CC
Confidence 67899999999999998 999999997776655 5788888888999999887 443332 34677889999 99
Q ss_pred CCcEEEEecCHHHHHHHHHcCCeE
Q 026543 173 SQEILVFEDAPSGVLAAKNAGMSV 196 (237)
Q Consensus 173 ~~~~~~igD~~~Di~~a~~~G~~~ 196 (237)
+++|++|||++.++.++..+|+.+
T Consensus 124 ~~~~vivdDs~~~~~~~~~ngi~i 147 (181)
T 2ght_A 124 LRRVLILDNSPASYVFHPDNAVPV 147 (181)
T ss_dssp GGGEEEECSCGGGGTTCTTSBCCC
T ss_pred cceEEEEeCCHHHhccCcCCEeEe
Confidence 999999999999999999999874
|
| >4g63_A Cytosolic IMP-GMP specific 5'-nucleotidase; structural genomics, PSI-biology, northeast structural genom consortium, NESG; 2.70A {Legionella pneumophila subsp} PDB: 2bde_A | Back alignment and structure |
|---|
Probab=98.88 E-value=1.7e-07 Score=76.29 Aligned_cols=107 Identities=16% Similarity=0.103 Sum_probs=78.0
Q ss_pred CCCCccHHHHHHHHHhCCCCEEEEeCChhhHHHHHHhhh-h--------hhhhhcceeeeCCC---------------CC
Q 026543 93 SELMPGASHLIRHLHAKGIPMCVATGSLARHFELKTQKH-R--------ELFSLMHHVVRGDD---------------PE 148 (237)
Q Consensus 93 ~~~~~~~~~~l~~l~~~g~~v~i~s~~~~~~~~~~~~~~-~--------gl~~~f~~~~~~~~---------------~~ 148 (237)
+...|.+...|..|+++|.++.++||+....+.. .++. + .+.++||.|++... .+
T Consensus 185 i~k~~~l~~~L~~lr~~GKklFLiTNS~~~y~~~-~M~y~~~~~~~~g~dWrdlFDvVIv~A~KP~FF~~~~~~~~v~~~ 263 (470)
T 4g63_A 185 VIREKEVVEGLKHFIRYGKKIFILTNSEYSYSKL-LLDYALSPFLDKGEHWQGLFEFVITLANKPRFFYDNLRFLSVNPE 263 (470)
T ss_dssp EECCHHHHHHHHHHHTTTCEEEEECSSCHHHHHH-HHHHHTGGGSCTTCCGGGGCSEEEESCCTTHHHHSCCCEEEECTT
T ss_pred hhCCHhHHHHHHHHHHcCCeEEEeeCCCchHHHH-HHHhhcccCCCCCCChhhhcCEEEECCCCCCcccCCCcceEEECC
Confidence 4457899999999999999999999988876653 3332 2 47789999987540 00
Q ss_pred cc----C---CCC---CHHHHHHHHHHcCCCCCCCCcEEEEecCH-HHHHHHHH-cCCeEEEEcCCC
Q 026543 149 VK----Q---GKP---SPDIFLAAAKRFEGGPIDSQEILVFEDAP-SGVLAAKN-AGMSVVMVPDPR 203 (237)
Q Consensus 149 ~~----~---~kp---~~~~~~~~l~~~~~~~~~~~~~~~igD~~-~Di~~a~~-~G~~~i~v~~~~ 203 (237)
.+ . .+| .......+.+.+| ....+++||||+. .||..++. .||.|+.|....
T Consensus 264 ~g~l~~~~~~~~~~vY~gGn~~~l~~llg---~~g~~VLY~GDhi~~Di~~~kk~~gWrT~~Ii~EL 327 (470)
T 4g63_A 264 NGTMTNVHGPIVPGVYQGGNAKKFTEDLG---VGGDEILYIGDHIYGDILRLKKDCNWRTALVVEEL 327 (470)
T ss_dssp TCCEEECCSSCCSEEEEECCHHHHHHHTT---CCGGGEEEEESCCCSCHHHHHHSCCCEEEEECTTH
T ss_pred CCcccccccccCCceeecCcHHHHHHHhC---CCCCeEEEECCchHHHHHhhhhccCCeEEEEhHHH
Confidence 00 0 011 0122566778888 9999999999999 99887776 599999997644
|
| >1xvi_A MPGP, YEDP, putative mannosyl-3-phosphoglycerate phosphatase; hypothetical protein, conserved protein, phophatase-like domain; HET: 1PE PG4 PGE; 2.26A {Escherichia coli K12} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=98.88 E-value=3.9e-09 Score=81.32 Aligned_cols=66 Identities=11% Similarity=0.013 Sum_probs=40.4
Q ss_pred cCCCCCHHHHHHHHHHcCCCCCCCCc--EEEEecCHHHHHHHHHcCCeEEEEcCCCCC---ccccc--chh-hhhhhhc
Q 026543 150 KQGKPSPDIFLAAAKRFEGGPIDSQE--ILVFEDAPSGVLAAKNAGMSVVMVPDPRLD---SSYHS--NAD-QLLSSLL 220 (237)
Q Consensus 150 ~~~kp~~~~~~~~l~~~~~~~~~~~~--~~~igD~~~Di~~a~~~G~~~i~v~~~~~~---~~~~~--~~~-~~~~~~~ 220 (237)
..+.+|..++..+++++|. +++++ +++|||+.||++|++.+|+ .|..++.. +..+. .++ +++.+..
T Consensus 185 ~~~~~K~~~l~~l~~~~~~--~~~~~~~~~~~GD~~nD~~m~~~ag~---~va~~n~~~~~~~~~~~~~a~~~v~~~~~ 258 (275)
T 1xvi_A 185 DASAGKDQAANWIIATYQQ--LSGKRPTTLGLGDGPNDAPLLEVMDY---AVIVKGLNREGVHLHDEDPARVWRTQREG 258 (275)
T ss_dssp ETTCCHHHHHHHHHHHHHH--HHSSCCEEEEEESSGGGHHHHHTSSE---EEECCCCC---------------------
T ss_pred cCCCCHHHHHHHHHHHhhh--cccccCcEEEECCChhhHHHHHhCCc---eEEecCCCccchhhccccCCceeEccCCC
Confidence 4566789999999999861 35778 9999999999999999995 34444443 22222 366 6665544
|
| >3j08_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} | Back alignment and structure |
|---|
Probab=98.87 E-value=3.5e-09 Score=90.71 Aligned_cols=109 Identities=17% Similarity=0.152 Sum_probs=80.1
Q ss_pred CCCCccHHHHHHHHHhCCCCEEEEeCChhhHHHHHHhhhhhhhhhcceeeeCCCCCccCCCCCHHHHHHHHHHcCCCCCC
Q 026543 93 SELMPGASHLIRHLHAKGIPMCVATGSLARHFELKTQKHRELFSLMHHVVRGDDPEVKQGKPSPDIFLAAAKRFEGGPID 172 (237)
Q Consensus 93 ~~~~~~~~~~l~~l~~~g~~v~i~s~~~~~~~~~~~~~~~gl~~~f~~~~~~~~~~~~~~kp~~~~~~~~l~~~~~~~~~ 172 (237)
.++.|++.+.++.|+++|++++++|+.... ....+.+.+|+..++..+. |.....+++++. -.
T Consensus 456 D~l~~~~~~~i~~L~~~Gi~v~~~TGd~~~-~a~~ia~~lgi~~~~~~~~-------------P~~K~~~v~~l~---~~ 518 (645)
T 3j08_A 456 DTLKESAKPAVQELKRMGIKVGMITGDNWR-SAEAISRELNLDLVIAEVL-------------PHQKSEEVKKLQ---AK 518 (645)
T ss_dssp CCCTTTHHHHHHHHHHTTCEEEEECSSCHH-HHHHHHHHHTCSEEECSCC-------------TTCHHHHHHHHT---TT
T ss_pred CCchhHHHHHHHHHHHCCCEEEEEeCCCHH-HHHHHHHHcCCCEEEEeCC-------------HHhHHHHHHHHh---hC
Confidence 468899999999999999999999995554 4446777777753322221 112445666666 44
Q ss_pred CCcEEEEecCHHHHHHHHHcCCeEEEEcCCCCCcccccchhhhh--hhhccc
Q 026543 173 SQEILVFEDAPSGVLAAKNAGMSVVMVPDPRLDSSYHSNADQLL--SSLLGF 222 (237)
Q Consensus 173 ~~~~~~igD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~--~~~~el 222 (237)
++++||||+.||+.|.+.+| ++|+.++..+.....+|+++ +++..+
T Consensus 519 -~~v~~vGDg~ND~~al~~A~---vgiamg~g~~~a~~~AD~vl~~~~~~~i 566 (645)
T 3j08_A 519 -EVVAFVGDGINDAPALAQAD---LGIAVGSGSDVAVESGDIVLIRDDLRDV 566 (645)
T ss_dssp -CCEEEEECSSSCHHHHHHSS---EEEEECCCSCCSSCCSSSEESSCCTTHH
T ss_pred -CeEEEEeCCHhHHHHHHhCC---EEEEeCCCcHHHHHhCCEEEecCCHHHH
Confidence 79999999999999999999 77777766666677788877 444444
|
| >3j09_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} | Back alignment and structure |
|---|
Probab=98.78 E-value=1.4e-08 Score=88.16 Aligned_cols=109 Identities=17% Similarity=0.136 Sum_probs=80.6
Q ss_pred CCCCccHHHHHHHHHhCCCCEEEEeCChhhHHHHHHhhhhhhhhhcceeeeCCCCCccCCCCCHHHHHHHHHHcCCCCCC
Q 026543 93 SELMPGASHLIRHLHAKGIPMCVATGSLARHFELKTQKHRELFSLMHHVVRGDDPEVKQGKPSPDIFLAAAKRFEGGPID 172 (237)
Q Consensus 93 ~~~~~~~~~~l~~l~~~g~~v~i~s~~~~~~~~~~~~~~~gl~~~f~~~~~~~~~~~~~~kp~~~~~~~~l~~~~~~~~~ 172 (237)
.++.|++.+.++.|+++|++++++|+.... ....+.+.+|+.. +++.- . |.....+++++. -.
T Consensus 534 D~~~~~~~~~i~~l~~~Gi~v~~~TGd~~~-~a~~ia~~lgi~~----~~~~~---~------P~~K~~~v~~l~---~~ 596 (723)
T 3j09_A 534 DTLKESAKPAVQELKRMGIKVGMITGDNWR-SAEAISRELNLDL----VIAEV---L------PHQKSEEVKKLQ---AK 596 (723)
T ss_dssp CCSCTTHHHHHHHHHHTTCEEEEECSSCHH-HHHHHHHHHTCSE----EECSC---C------TTCHHHHHHHHT---TT
T ss_pred CCcchhHHHHHHHHHHCCCEEEEECCCCHH-HHHHHHHHcCCcE----EEccC---C------HHHHHHHHHHHh---cC
Confidence 468999999999999999999999985544 4446677777743 33221 1 112455666666 44
Q ss_pred CCcEEEEecCHHHHHHHHHcCCeEEEEcCCCCCcccccchhhhh--hhhccc
Q 026543 173 SQEILVFEDAPSGVLAAKNAGMSVVMVPDPRLDSSYHSNADQLL--SSLLGF 222 (237)
Q Consensus 173 ~~~~~~igD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~--~~~~el 222 (237)
++++||||+.||+.|.+.+| ++|+.++..+.....+|+++ +++..+
T Consensus 597 -~~v~~vGDg~ND~~al~~A~---vgiamg~g~~~a~~~AD~vl~~~~~~~i 644 (723)
T 3j09_A 597 -EVVAFVGDGINDAPALAQAD---LGIAVGSGSDVAVESGDIVLIRDDLRDV 644 (723)
T ss_dssp -CCEEEEECSSTTHHHHHHSS---EEEECCCCSCCSSCCSSEECSSCCTTHH
T ss_pred -CeEEEEECChhhHHHHhhCC---EEEEeCCCcHHHHHhCCEEEeCCCHHHH
Confidence 79999999999999999999 78888877666677888877 444443
|
| >4as2_A Phosphorylcholine phosphatase; hydrolase, HAD superfamily, alkylammonium compounds; HET: BTB; 2.12A {Pseudomonas aeruginosa} PDB: 4as3_A* | Back alignment and structure |
|---|
Probab=98.69 E-value=7.2e-07 Score=70.04 Aligned_cols=58 Identities=14% Similarity=0.178 Sum_probs=44.7
Q ss_pred CCHHHHHHHHHHHHHhhcC-----------------CCCCCccHHHHHHHHHhCCCCEEEEeCChhhHHHHHHhhh
Q 026543 73 LSAEDFLVQREETLQTLFP-----------------TSELMPGASHLIRHLHAKGIPMCVATGSLARHFELKTQKH 131 (237)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~~l~~l~~~g~~v~i~s~~~~~~~~~~~~~~ 131 (237)
.+.+++....++......+ .+.++|+++++++.|+++|+.++|+|++.... ...+...
T Consensus 105 mT~~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~G~~v~ivSas~~~~-v~~~a~~ 179 (327)
T 4as2_A 105 FTLRELKGYVDELMAYGKPIPATYYDGDKLATLDVEPPRVFSGQRELYNKLMENGIEVYVISAAHEEL-VRMVAAD 179 (327)
T ss_dssp SBHHHHHHHHHHHHHHCSCEEEEEEETTEEEEEEECCCEECHHHHHHHHHHHHTTCEEEEEEEEEHHH-HHHHHTC
T ss_pred CCHHHHHHHHHHHHHhccccccccccccccccccccccccCHHHHHHHHHHHHCCCEEEEEeCCcHHH-HHHHHhh
Confidence 7788888888887764332 23589999999999999999999999966554 4456654
|
| >3ar4_A Sarcoplasmic/endoplasmic reticulum calcium ATPase; P-type ATPase, hydrolase, calcium transport, calcium binding binding; HET: ATP TG1 PTY; 2.15A {Oryctolagus cuniculus} PDB: 2ear_A* 2eas_A* 2eat_A* 2eau_A* 2dqs_A* 2zbe_A 2zbf_A* 2zbg_A* 3ar2_A* 2zbd_A* 3ar3_A* 3ar5_A* 3ar6_A* 3ar7_A* 3ar8_A* 3ar9_A* 3n5k_A* 1kju_A 1iwo_A 1t5s_A* ... | Back alignment and structure |
|---|
Probab=98.61 E-value=1.9e-08 Score=90.35 Aligned_cols=115 Identities=12% Similarity=0.084 Sum_probs=77.3
Q ss_pred CCCCccHHHHHHHHHhCCCCEEEEeCChhhHHHHHHhhhhhhhhhc----ceeeeCCCCCccC----------------C
Q 026543 93 SELMPGASHLIRHLHAKGIPMCVATGSLARHFELKTQKHRELFSLM----HHVVRGDDPEVKQ----------------G 152 (237)
Q Consensus 93 ~~~~~~~~~~l~~l~~~g~~v~i~s~~~~~~~~~~~~~~~gl~~~f----~~~~~~~~~~~~~----------------~ 152 (237)
.++.|++.+.++.|+++|++++++|+... .....+.+.+|+.... +.++.++ +... .
T Consensus 602 D~lr~~~~~~I~~l~~~Gi~v~miTGD~~-~ta~~ia~~lgi~~~~~~i~~~~~~g~--~~~~l~~~~~~~~~~~~~v~~ 678 (995)
T 3ar4_A 602 DPPRKEVMGSIQLCRDAGIRVIMITGDNK-GTAIAICRRIGIFGENEEVADRAYTGR--EFDDLPLAEQREACRRACCFA 678 (995)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEEESSCH-HHHHHHHHHHTSSCTTCCCTTTEEEHH--HHHTSCHHHHHHHHHHCCEEE
T ss_pred CCCchhHHHHHHHHHHcCCEEEEECCCCH-HHHHHHHHHcCcCCCCCcccceEEEch--hhhhCCHHHHHHHHhhCcEEE
Confidence 46789999999999999999999998554 4455677778875432 1233322 1110 1
Q ss_pred CCCHHHHHHHHHHcCCCCCCCCcEEEEecCHHHHHHHHHcCCeEEEEcCCCCCcccccchhhhh
Q 026543 153 KPSPDIFLAAAKRFEGGPIDSQEILVFEDAPSGVLAAKNAGMSVVMVPDPRLDSSYHSNADQLL 216 (237)
Q Consensus 153 kp~~~~~~~~l~~~~~~~~~~~~~~~igD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~ 216 (237)
.-.|+....+++.+. -..+.++|+||+.||+.|.+.|+ ++|+.+...+..+..+|+++
T Consensus 679 r~~P~~K~~~v~~l~---~~g~~v~~~GDG~ND~~alk~Ad---vgiamg~g~~~ak~aAd~vl 736 (995)
T 3ar4_A 679 RVEPSHKSKIVEYLQ---SYDEITAMTGDGVNDAPALKKAE---IGIAMGSGTAVAKTASEMVL 736 (995)
T ss_dssp SCCSSHHHHHHHHHH---TTTCCEEEEECSGGGHHHHHHST---EEEEETTSCHHHHHTCSEEE
T ss_pred EeCHHHHHHHHHHHH---HCCCEEEEEcCCchhHHHHHHCC---eEEEeCCCCHHHHHhCCEEE
Confidence 112334555666666 45678999999999999999999 55555544444455566665
|
| >3rfu_A Copper efflux ATPase; alpha helical, CPC, CXXC, ATP-binding, hydrolase, ION transp magnesium, Cu+, membrane, metal-binding; 3.20A {Legionella pneumophila subsp} | Back alignment and structure |
|---|
Probab=98.56 E-value=4.9e-08 Score=84.63 Aligned_cols=104 Identities=14% Similarity=0.069 Sum_probs=78.4
Q ss_pred CCCCccHHHHHHHHHhCCCCEEEEeCChhhHHHHHHhhhhhhhhhcceeeeCCCCCccCCCCCHHHHHHHHHHcCCCCCC
Q 026543 93 SELMPGASHLIRHLHAKGIPMCVATGSLARHFELKTQKHRELFSLMHHVVRGDDPEVKQGKPSPDIFLAAAKRFEGGPID 172 (237)
Q Consensus 93 ~~~~~~~~~~l~~l~~~g~~v~i~s~~~~~~~~~~~~~~~gl~~~f~~~~~~~~~~~~~~kp~~~~~~~~l~~~~~~~~~ 172 (237)
.++.+++.+.++.|+++|++++++|+.... ....+.+.+|+.. +++.- .|+....+++++. -.
T Consensus 553 D~i~~~~~~aI~~L~~~Gi~v~mlTGd~~~-~a~~ia~~lgi~~----v~a~~---------~P~~K~~~v~~l~---~~ 615 (736)
T 3rfu_A 553 DPIKSSTPETILELQQSGIEIVMLTGDSKR-TAEAVAGTLGIKK----VVAEI---------MPEDKSRIVSELK---DK 615 (736)
T ss_dssp CCBCSSHHHHHHHHHHHTCEEEEECSSCHH-HHHHHHHHHTCCC----EECSC---------CHHHHHHHHHHHH---HH
T ss_pred ccchhhHHHHHHHHHHCCCeEEEECCCCHH-HHHHHHHHcCCCE----EEEec---------CHHHHHHHHHHHH---hc
Confidence 468899999999999999999999995554 4446677777643 32221 3445566666666 55
Q ss_pred CCcEEEEecCHHHHHHHHHcCCeEEEEcCCCCCcccccchhhhh
Q 026543 173 SQEILVFEDAPSGVLAAKNAGMSVVMVPDPRLDSSYHSNADQLL 216 (237)
Q Consensus 173 ~~~~~~igD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~ 216 (237)
.+.++||||+.||+.|.+.+| ++|+.++..+.....+|+++
T Consensus 616 g~~V~~vGDG~ND~paL~~Ad---vGIAmg~g~d~a~~~AD~vl 656 (736)
T 3rfu_A 616 GLIVAMAGDGVNDAPALAKAD---IGIAMGTGTDVAIESAGVTL 656 (736)
T ss_dssp SCCEEEEECSSTTHHHHHHSS---EEEEESSSCSHHHHHCSEEE
T ss_pred CCEEEEEECChHhHHHHHhCC---EEEEeCCccHHHHHhCCEEE
Confidence 678999999999999999999 67777766655566677766
|
| >3qle_A TIM50P; chaperone, mitochondrion, preprotein translocation; HET: 1PE; 1.83A {Saccharomyces cerevisiae EC1118} | Back alignment and structure |
|---|
Probab=98.44 E-value=1.4e-08 Score=74.05 Aligned_cols=93 Identities=8% Similarity=0.162 Sum_probs=70.5
Q ss_pred CCCCccHHHHHHHHHhCCCCEEEEeCChhhHHHHHHhhhhhhh-hhcceeeeCCCCCccCCCCCHHHHHHHHHHcCCCCC
Q 026543 93 SELMPGASHLIRHLHAKGIPMCVATGSLARHFELKTQKHRELF-SLMHHVVRGDDPEVKQGKPSPDIFLAAAKRFEGGPI 171 (237)
Q Consensus 93 ~~~~~~~~~~l~~l~~~g~~v~i~s~~~~~~~~~~~~~~~gl~-~~f~~~~~~~~~~~~~~kp~~~~~~~~l~~~~~~~~ 171 (237)
+...||+.++|+.+. +++.++|.|++...+.. .+++.++.. .+|+..+..+ ..... ...+.+-++.+| .
T Consensus 58 v~~RPgl~eFL~~l~-~~yeivI~Tas~~~ya~-~vl~~LDp~~~~f~~rl~R~--~c~~~---~g~y~KdL~~Lg---r 127 (204)
T 3qle_A 58 TAKRPGADYFLGYLS-QYYEIVLFSSNYMMYSD-KIAEKLDPIHAFVSYNLFKE--HCVYK---DGVHIKDLSKLN---R 127 (204)
T ss_dssp EEECTTHHHHHHHHT-TTEEEEEECSSCHHHHH-HHHHHTSTTCSSEEEEECGG--GSEEE---TTEEECCGGGSC---S
T ss_pred EEeCCCHHHHHHHHH-hCCEEEEEcCCcHHHHH-HHHHHhCCCCCeEEEEEEec--ceeEE---CCeeeecHHHhC---C
Confidence 678999999999998 55999999997776555 567777765 4788776665 22211 112566788899 9
Q ss_pred CCCcEEEEecCHHHHHHHHHcCCe
Q 026543 172 DSQEILVFEDAPSGVLAAKNAGMS 195 (237)
Q Consensus 172 ~~~~~~~igD~~~Di~~a~~~G~~ 195 (237)
++++|++|+|++.........|+.
T Consensus 128 dl~~vIiIDDsp~~~~~~p~N~I~ 151 (204)
T 3qle_A 128 DLSKVIIIDTDPNSYKLQPENAIP 151 (204)
T ss_dssp CGGGEEEEESCTTTTTTCGGGEEE
T ss_pred ChHHEEEEECCHHHHhhCccCceE
Confidence 999999999999888776667743
|
| >2zos_A MPGP, mannosyl-3-phosphoglycerate phosphatase; haloacid dehalogenase like hydrolase, mannosylglycerate, cytoplasm, hydrolase, magnesium; 1.70A {Pyrococcus horikoshii} PDB: 1wzc_A | Back alignment and structure |
|---|
Probab=98.39 E-value=1.7e-07 Score=70.94 Aligned_cols=65 Identities=5% Similarity=-0.146 Sum_probs=53.6
Q ss_pred CCCCHHHHHHHHHHcCCCCC-CCCcEEEEecCHHHHHHHHHcCCeEEEEcCCCCC-cccccchhhhhhhhccc
Q 026543 152 GKPSPDIFLAAAKRFEGGPI-DSQEILVFEDAPSGVLAAKNAGMSVVMVPDPRLD-SSYHSNADQLLSSLLGF 222 (237)
Q Consensus 152 ~kp~~~~~~~~l~~~~~~~~-~~~~~~~igD~~~Di~~a~~~G~~~i~v~~~~~~-~~~~~~~~~~~~~~~el 222 (237)
+..|..+++.++++++ + +++++++|||+.||++|++.+|+ .|.+++.. +..+..+++++++..+-
T Consensus 177 g~sKg~al~~l~~~~~---~~~~~~viafGD~~NDi~Ml~~ag~---~va~gna~~~~~~~~a~~v~~~~~~~ 243 (249)
T 2zos_A 177 NSDKGKAAKILLDFYK---RLGQIESYAVGDSYNDFPMFEVVDK---VFIVGSLKHKKAQNVSSIIDVLEVIK 243 (249)
T ss_dssp SCCHHHHHHHHHHHHH---TTSCEEEEEEECSGGGHHHHTTSSE---EEEESSCCCTTEEEESSHHHHHHHHH
T ss_pred CCChHHHHHHHHHHhc---cCCCceEEEECCCcccHHHHHhCCc---EEEeCCCCccccchhceEEecccccc
Confidence 5667899999999999 9 99999999999999999999995 45555654 44556799998887653
|
| >2zxe_A Na, K-ATPase alpha subunit; membrane protein, ION pump, ATPase, K+ binding, haloacid dehydrogenease superfamily, phosphate analogue; HET: CLR NAG NDG; 2.40A {Squalus acanthias} PDB: 3a3y_A* 3b8e_A* 3kdp_A* 3n2f_A* 3n23_A* 1mo7_A 1mo8_A* 1q3i_A | Back alignment and structure |
|---|
Probab=98.39 E-value=3.6e-07 Score=82.36 Aligned_cols=118 Identities=19% Similarity=0.147 Sum_probs=76.0
Q ss_pred CCCCccHHHHHHHHHhCCCCEEEEeCChhhHHHHHHhhhhhhhhh------------------------cceeeeCCC--
Q 026543 93 SELMPGASHLIRHLHAKGIPMCVATGSLARHFELKTQKHRELFSL------------------------MHHVVRGDD-- 146 (237)
Q Consensus 93 ~~~~~~~~~~l~~l~~~g~~v~i~s~~~~~~~~~~~~~~~gl~~~------------------------f~~~~~~~~-- 146 (237)
.++.|++.+.++.|+++|++++++|+.... ....+.+.+|+... ...++.+..
T Consensus 598 Dplr~~~~~aI~~l~~aGI~v~miTGD~~~-tA~~ia~~lgi~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~vi~G~~l~ 676 (1028)
T 2zxe_A 598 DPPRAAVPDAVGKCRSAGIKVIMVTGDHPI-TAKAIAKGVGIISEGNETIEDIAARLNIPIGQVNPRDAKACVVHGSDLK 676 (1028)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEECSSCHH-HHHHHHHHHTSSCTTCCCHHHHHHHTTCCGGGSCGGGCCEEEEEHHHHT
T ss_pred CCCChhHHHHHHHHHHcCCEEEEECCCCHH-HHHHHHHHcCCCCCCchhHHHHHhhcCcchhhccccccceEEEEcHHhh
Confidence 357899999999999999999999995544 44456777776421 011221110
Q ss_pred -------------C-CccCCCCCHHHHHHHHHHcCCCCCCCCcEEEEecCHHHHHHHHHcCCeEEEEcCCC-CCcccccc
Q 026543 147 -------------P-EVKQGKPSPDIFLAAAKRFEGGPIDSQEILVFEDAPSGVLAAKNAGMSVVMVPDPR-LDSSYHSN 211 (237)
Q Consensus 147 -------------~-~~~~~kp~~~~~~~~l~~~~~~~~~~~~~~~igD~~~Di~~a~~~G~~~i~v~~~~-~~~~~~~~ 211 (237)
. ........|+....+.+.+. -....+.|+||+.||+.|.+.|+ ++|+++. ..+..+..
T Consensus 677 ~~~~~~l~~~~~~~~~~v~ar~~P~~K~~iV~~lq---~~g~~V~~iGDG~ND~paLk~Ad---vGIAmg~~gtd~ak~a 750 (1028)
T 2zxe_A 677 DLSTEVLDDILHYHTEIVFARTSPQQKLIIVEGCQ---RQGAIVAVTGDGVNDSPALKKAD---IGVAMGISGSDVSKQA 750 (1028)
T ss_dssp TCCHHHHHHHHHHCSEEEEESCCHHHHHHHHHHHH---HTTCCEEEEECSGGGHHHHHHSS---EEEEESSSCCHHHHHH
T ss_pred hCCHHHHHHHHhhCCcEEEEEcCHHHHHHHHHHHH---hCCCEEEEEcCCcchHHHHHhCC---ceEEeCCccCHHHHHh
Confidence 0 00122334555566655554 33467999999999999999999 6666663 44444455
Q ss_pred hhhhhh
Q 026543 212 ADQLLS 217 (237)
Q Consensus 212 ~~~~~~ 217 (237)
+|+++.
T Consensus 751 AD~Vl~ 756 (1028)
T 2zxe_A 751 ADMILL 756 (1028)
T ss_dssp CSEEET
T ss_pred cCEEec
Confidence 666543
|
| >3ef0_A RNA polymerase II subunit A C-terminal domain phosphatase; CTD, FCPH, BRCT, hydrolase, ALF4, transition state analog, cobalt, magnesium; 2.10A {Schizosaccharomyces pombe} | Back alignment and structure |
|---|
Probab=98.38 E-value=2.4e-08 Score=79.48 Aligned_cols=93 Identities=13% Similarity=0.163 Sum_probs=66.4
Q ss_pred CCCCCccHHHHHHHHHhCCCCEEEEeCChhhHHHHHHhhhhhhhh-hcc-eeeeCCCCCccCCCCCHHHHHHHHHHc-CC
Q 026543 92 TSELMPGASHLIRHLHAKGIPMCVATGSLARHFELKTQKHRELFS-LMH-HVVRGDDPEVKQGKPSPDIFLAAAKRF-EG 168 (237)
Q Consensus 92 ~~~~~~~~~~~l~~l~~~g~~v~i~s~~~~~~~~~~~~~~~gl~~-~f~-~~~~~~~~~~~~~kp~~~~~~~~l~~~-~~ 168 (237)
.+...||+.++|+.+. +++.++|.|++...+.. .+++.++... +|+ .+++.+ +.+. .+.+-++++ |
T Consensus 73 ~v~~RPg~~eFL~~l~-~~yeivI~Tas~~~yA~-~vl~~LDp~~~~f~~ri~sr~--~~g~------~~~KdL~~L~~- 141 (372)
T 3ef0_A 73 YIKFRPGLAQFLQKIS-ELYELHIYTMGTKAYAK-EVAKIIDPTGKLFQDRVLSRD--DSGS------LAQKSLRRLFP- 141 (372)
T ss_dssp EEEECTTHHHHHHHHH-TTEEEEEECSSCHHHHH-HHHHHHCTTSCSSSSCEECTT--TSSC------SSCCCGGGTCS-
T ss_pred EEEECcCHHHHHHHHh-cCcEEEEEeCCcHHHHH-HHHHHhccCCceeeeEEEEec--CCCC------cceecHHHhcC-
Confidence 3778999999999999 55999999997777655 5778777776 677 566555 3321 133456665 8
Q ss_pred CCCCCCcEEEEecCHHHHHHHHHcCCeEEEEcC
Q 026543 169 GPIDSQEILVFEDAPSGVLAAKNAGMSVVMVPD 201 (237)
Q Consensus 169 ~~~~~~~~~~igD~~~Di~~a~~~G~~~i~v~~ 201 (237)
.+++++++|+|++.-...- . ..|.|..
T Consensus 142 --~dl~~viiiDd~~~~~~~~---p-N~I~i~~ 168 (372)
T 3ef0_A 142 --CDTSMVVVIDDRGDVWDWN---P-NLIKVVP 168 (372)
T ss_dssp --SCCTTEEEEESCSGGGTTC---T-TEEECCC
T ss_pred --CCCceEEEEeCCHHHcCCC---C-cEeeeCC
Confidence 9999999999998544322 2 3466654
|
| >3ixz_A Potassium-transporting ATPase alpha; ION pump, H+, K+-ATPase, P-type ATPase, membrane protein, hydrolase, aluminium fluoride, ATP-binding; 6.50A {Sus scrofa} PDB: 2yn9_A 2xzb_A 1iwc_A 1iwf_A | Back alignment and structure |
|---|
Probab=98.33 E-value=6.7e-07 Score=80.69 Aligned_cols=120 Identities=18% Similarity=0.119 Sum_probs=76.9
Q ss_pred CCCCccHHHHHHHHHhCCCCEEEEeCChhhHHHHHHhhhhhhhhhc------------------------ceeeeCCC--
Q 026543 93 SELMPGASHLIRHLHAKGIPMCVATGSLARHFELKTQKHRELFSLM------------------------HHVVRGDD-- 146 (237)
Q Consensus 93 ~~~~~~~~~~l~~l~~~g~~v~i~s~~~~~~~~~~~~~~~gl~~~f------------------------~~~~~~~~-- 146 (237)
.++.+++.+.++.|+++|++++++|+..... ...+.+.+|+...- ..++.+..
T Consensus 603 Dp~r~~~~~aI~~l~~aGI~vvmiTGd~~~t-A~~ia~~lgi~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~ 681 (1034)
T 3ixz_A 603 DPPRATVPDAVLKCRTAGIRVIMVTGDHPIT-AKAIAASVGIISEGSETVEDIAARLRVPVDQVNRKDARACVINGMQLK 681 (1034)
T ss_pred CCCchhHHHHHHHHHHcCCeEEEEeCCCHHH-HHHHHHHcCCCCCCchHHHHHHHhhCccchhccccccceeEEecHhhh
Confidence 4689999999999999999999999965543 33566666663210 01111110
Q ss_pred --------------CCccCCCCCHHHHHHHHHHcCCCCCCCCcEEEEecCHHHHHHHHHcCCeEEEEcCC-CCCcccccc
Q 026543 147 --------------PEVKQGKPSPDIFLAAAKRFEGGPIDSQEILVFEDAPSGVLAAKNAGMSVVMVPDP-RLDSSYHSN 211 (237)
Q Consensus 147 --------------~~~~~~kp~~~~~~~~l~~~~~~~~~~~~~~~igD~~~Di~~a~~~G~~~i~v~~~-~~~~~~~~~ 211 (237)
.......-.|.....+.+.+. -....++++||+.||+.|.+.|| ++|+++ +..+..+..
T Consensus 682 ~~~~~~l~~~~~~~~~~v~ar~~P~~K~~iv~~lq---~~g~~V~a~GDG~ND~~mLk~A~---vGIAMg~ng~d~aK~a 755 (1034)
T 3ixz_A 682 DMDPSELVEALRTHPEMVFARTSPQQKLVIVESCQ---RLGAIVAVTGDGVNDSPALKKAD---IGVAMGIAGSDAAKNA 755 (1034)
T ss_pred hCCHHHHHHHHHhCCceEEEecCHHHHHHHHHHHH---HcCCEEEEECCcHHhHHHHHHCC---eeEEeCCccCHHHHHh
Confidence 000111223444444444444 33456999999999999999999 777777 555555667
Q ss_pred hhhhhhhh
Q 026543 212 ADQLLSSL 219 (237)
Q Consensus 212 ~~~~~~~~ 219 (237)
+|+++.+.
T Consensus 756 AD~Vl~~~ 763 (1034)
T 3ixz_A 756 ADMILLDD 763 (1034)
T ss_pred cCEEeccC
Confidence 77776543
|
| >1s2o_A SPP, sucrose-phosphatase; phosphohydrolase, HAD superfamily, cyanobacteria; 1.40A {Synechocystis SP} SCOP: c.108.1.10 PDB: 1tj3_A 1tj4_A* 1tj5_A* 1u2s_A* 1u2t_A* 2b1q_A* 2b1r_A* 2d2v_A* | Back alignment and structure |
|---|
Probab=98.26 E-value=3.7e-07 Score=68.95 Aligned_cols=56 Identities=9% Similarity=0.035 Sum_probs=45.5
Q ss_pred ccCCCCCHHHHHHHHHHcCCCCCCCCcEEEEecCHHHHHHHHHcCCeEEEEcCCCCCccccc
Q 026543 149 VKQGKPSPDIFLAAAKRFEGGPIDSQEILVFEDAPSGVLAAKNAGMSVVMVPDPRLDSSYHS 210 (237)
Q Consensus 149 ~~~~kp~~~~~~~~l~~~~~~~~~~~~~~~igD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~ 210 (237)
...+.+|+.++.++++++| ++++++++|||+.||++|++.+|+ .|..++..+..+.
T Consensus 157 ~~~~~~K~~~l~~l~~~~~---~~~~~~~~~GD~~nD~~m~~~~g~---~va~~na~~~~k~ 212 (244)
T 1s2o_A 157 LPQRSNKGNATQYLQQHLA---MEPSQTLVCGDSGNDIGLFETSAR---GVIVRNAQPELLH 212 (244)
T ss_dssp EETTCSHHHHHHHHHHHTT---CCGGGEEEEECSGGGHHHHTSSSE---EEECTTCCHHHHH
T ss_pred ccCCCChHHHHHHHHHHhC---CCHHHEEEECCchhhHHHHhccCc---EEEEcCCcHHHHH
Confidence 3456788999999999999 999999999999999999999995 4555655444343
|
| >1mhs_A Proton pump, plasma membrane ATPase; ION transport, membrane protein, P-type ATPase, active transport, cryo-electron microscopy; 8.00A {Neurospora crassa} SCOP: i.18.1.1 | Back alignment and structure |
|---|
Probab=98.26 E-value=8.2e-07 Score=78.69 Aligned_cols=117 Identities=12% Similarity=0.051 Sum_probs=75.3
Q ss_pred CCCCccHHHHHHHHHhCCCCEEEEeCChhhHHHHHHhhhhhhhhhc-c---eeeeCCC----C--------CccCCCCCH
Q 026543 93 SELMPGASHLIRHLHAKGIPMCVATGSLARHFELKTQKHRELFSLM-H---HVVRGDD----P--------EVKQGKPSP 156 (237)
Q Consensus 93 ~~~~~~~~~~l~~l~~~g~~v~i~s~~~~~~~~~~~~~~~gl~~~f-~---~~~~~~~----~--------~~~~~kp~~ 156 (237)
.++.|++.+.++.|++.|++++++|+ +.......+.+.+|+.... + .++.+++ . ......-.|
T Consensus 534 Dp~R~ea~~aI~~l~~aGI~v~MiTG-D~~~TA~aIA~~lGI~~~~~~~~~~~~~g~~~~~~~el~~~~~~~~V~arv~P 612 (920)
T 1mhs_A 534 DPPRHDTYKTVCEAKTLGLSIKMLTG-DAVGIARETSRQLGLGTNIYNAERLGLGGGGDMPGSEVYDFVEAADGFAEVFP 612 (920)
T ss_dssp CCCCHHHHHHHHHHHHHTCEEEEEES-SCHHHHHHHHHHHTSSCSCCCSSSSSSCBCCCGGGGGGGTTTTTTSCEESCCS
T ss_pred ccccccHHHHHHHHhhcCceEEEEcC-CCHHHHHHHHHHcCCCccccCccceeecCcccCCHHHHHHHHhhCeEEEEeCH
Confidence 46899999999999999999999998 4445555678888875311 0 0111100 0 001112233
Q ss_pred HHHHHHHHHcCCCCCCCCcEEEEecCHHHHHHHHHcCCeEEEEcCCCCCcccccchhhhh
Q 026543 157 DIFLAAAKRFEGGPIDSQEILVFEDAPSGVLAAKNAGMSVVMVPDPRLDSSYHSNADQLL 216 (237)
Q Consensus 157 ~~~~~~l~~~~~~~~~~~~~~~igD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~ 216 (237)
+-...+.+.+. -..+.+.|+||+.||..|.+.|+ ++|+.+...+..+..+|.++
T Consensus 613 ~~K~~iV~~Lq---~~g~~Vam~GDGvNDapaLk~Ad---vGIAmg~gtd~ak~aADiVl 666 (920)
T 1mhs_A 613 QHKYNVVEILQ---QRGYLVAMTGDGVNDAPSLKKAD---TGIAVEGSSDAARSAADIVF 666 (920)
T ss_dssp THHHHHHHHHH---TTTCCCEECCCCGGGHHHHHHSS---EEEEETTSCHHHHHSSSEEE
T ss_pred HHHHHHHHHHH---hCCCeEEEEcCCcccHHHHHhCC---cCcccccccHHHHHhcCeEE
Confidence 44555666655 34468999999999999999999 56665654444444555554
|
| >3b8c_A ATPase 2, plasma membrane-type; P-type ATPase, proton pump, ATP-binding, hydrogen ION transport, hydrolase, ION transport; HET: ACP; 3.60A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=98.21 E-value=4.4e-07 Score=80.27 Aligned_cols=117 Identities=13% Similarity=0.078 Sum_probs=75.7
Q ss_pred CCCCccHHHHHHHHHhCCCCEEEEeCChhhHHHHHHhhhhhhhhh-c-ceeeeCCCC-C--------------ccCCCCC
Q 026543 93 SELMPGASHLIRHLHAKGIPMCVATGSLARHFELKTQKHRELFSL-M-HHVVRGDDP-E--------------VKQGKPS 155 (237)
Q Consensus 93 ~~~~~~~~~~l~~l~~~g~~v~i~s~~~~~~~~~~~~~~~gl~~~-f-~~~~~~~~~-~--------------~~~~kp~ 155 (237)
.++.|++.+.++.|++.|++++++|+ +.......+.+.+|+... + +.++.+.+. . .....-.
T Consensus 487 Dp~R~~a~~aI~~l~~aGI~v~MiTG-D~~~tA~~iA~~lGi~~~~~~~~~l~g~~~~~~~~~~~l~~~~~~~~v~arv~ 565 (885)
T 3b8c_A 487 DPPRHDSAETIRRALNLGVNVKMITG-DQLAIGKETGRRLGMGTNMYPSSALLGTHKDANLASIPVEELIEKADGFAGVF 565 (885)
T ss_dssp CCCCHHHHHHHHHHHHTTCCCEEEES-SCHHHHTHHHHTTTCTTCCSTTSSCCBGGGGTTSCCSCHHHHHHTSCCEECCC
T ss_pred cccchhHHHHHHHHHHcCCcEEEEcC-CChHHHHHHHHHhCCccccCCcceeeccccccccchhHHHHHHhhCcEEEEEC
Confidence 46789999999999999999999998 444455567777787431 0 111111100 0 0122334
Q ss_pred HHHHHHHHHHcCCCCCCCCcEEEEecCHHHHHHHHHcCCeEEEEcCCCCCcccccchhhhh
Q 026543 156 PDIFLAAAKRFEGGPIDSQEILVFEDAPSGVLAAKNAGMSVVMVPDPRLDSSYHSNADQLL 216 (237)
Q Consensus 156 ~~~~~~~l~~~~~~~~~~~~~~~igD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~ 216 (237)
|+-...+.+.+. -..+.+.|+||+.||..+.+.|+ ++|+.+...+..+..+|+++
T Consensus 566 P~~K~~iV~~lq---~~g~~Vam~GDGvNDapaLk~Ad---vGIAmg~gtd~ak~aADivl 620 (885)
T 3b8c_A 566 PEHKYEIVKKLQ---ERKHIVGMTGDGVNDAPALKKAD---IGIAVADATDAARGASDIVL 620 (885)
T ss_dssp HHHHHHHHHHHH---HTTCCCCBCCCSSTTHHHHHHSS---SCCCCSSSHHHHGGGCSSCC
T ss_pred HHHHHHHHHHHH---HCCCeEEEEcCCchhHHHHHhCC---EeEEeCCccHHHHHhcceee
Confidence 556666666665 34468999999999999999999 55666644333344455554
|
| >2obb_A Hypothetical protein; structural genomics, PSI-2, PR structure initiative, midwest center for structural genomic unknown function; 2.20A {Bacteroides thetaiotaomicron} SCOP: c.108.1.25 | Back alignment and structure |
|---|
Probab=98.13 E-value=7.5e-06 Score=56.02 Aligned_cols=27 Identities=11% Similarity=0.049 Sum_probs=23.8
Q ss_pred CCccHHHHHHHHHhCCCCEEEEeCChh
Q 026543 95 LMPGASHLIRHLHAKGIPMCVATGSLA 121 (237)
Q Consensus 95 ~~~~~~~~l~~l~~~g~~v~i~s~~~~ 121 (237)
+.|++.++|+.++++|+.++++|++..
T Consensus 25 ~~~~~~~al~~l~~~G~~iii~TgR~~ 51 (142)
T 2obb_A 25 EIPFAVETLKLLQQEKHRLILWSVREG 51 (142)
T ss_dssp BCTTHHHHHHHHHHTTCEEEECCSCCH
T ss_pred cCHHHHHHHHHHHHCCCEEEEEeCCCc
Confidence 456899999999999999999999763
|
| >3f9r_A Phosphomannomutase; trypanosome glycobiology structural genomics, isomerase, structural genomics consortium, SGC; 1.85A {Trypanosoma brucei} SCOP: c.108.1.0 PDB: 2i54_A* 2i55_A* | Back alignment and structure |
|---|
Probab=98.04 E-value=9.1e-06 Score=61.34 Aligned_cols=29 Identities=21% Similarity=0.091 Sum_probs=23.4
Q ss_pred CCCcEEEEecC----HHHHHHHHHcCCeEEEEc
Q 026543 172 DSQEILVFEDA----PSGVLAAKNAGMSVVMVP 200 (237)
Q Consensus 172 ~~~~~~~igD~----~~Di~~a~~~G~~~i~v~ 200 (237)
+++++++|||+ .||++|.+.+|...+.|.
T Consensus 198 ~~~ev~afGD~~~~g~NDi~Ml~~a~~~g~~v~ 230 (246)
T 3f9r_A 198 DFEEIHFFGDKTQEGGNDYEIYTDKRTIGHKVT 230 (246)
T ss_dssp TCSEEEEEESCCSTTSTTHHHHTCTTSEEEECS
T ss_pred CcccEEEEeCCCCCCCCCHHHHhCCCccEEEeC
Confidence 67899999996 899999998876555553
|
| >1xpj_A Hypothetical protein; structural genomics, MCSG, protein STR initiative, PSI, midwest center for structural genomics, UN function; HET: TLA; 2.30A {Vibrio cholerae} SCOP: c.108.1.18 | Back alignment and structure |
|---|
Probab=97.96 E-value=6.8e-06 Score=55.33 Aligned_cols=29 Identities=17% Similarity=0.201 Sum_probs=24.4
Q ss_pred CCCccHHHHHHHHHhCCCCEEEEeCChhh
Q 026543 94 ELMPGASHLIRHLHAKGIPMCVATGSLAR 122 (237)
Q Consensus 94 ~~~~~~~~~l~~l~~~g~~v~i~s~~~~~ 122 (237)
.+.++..+.++.++++|++++++|++...
T Consensus 24 ~~~~~~~~~l~~l~~~Gi~~~iaTGR~~~ 52 (126)
T 1xpj_A 24 LPRLDVIEQLREYHQLGFEIVISTARNMR 52 (126)
T ss_dssp CBCHHHHHHHHHHHHTTCEEEEEECTTTT
T ss_pred CCCHHHHHHHHHHHhCCCeEEEEeCCChh
Confidence 46678889999999999999999997543
|
| >3shq_A UBLCP1; phosphatase, hydrolase; 1.96A {Drosophila melanogaster} | Back alignment and structure |
|---|
Probab=97.74 E-value=2.5e-06 Score=66.58 Aligned_cols=97 Identities=10% Similarity=0.122 Sum_probs=62.3
Q ss_pred CCCccHHHHHHHHHhCCCCEEEEeCChhhHHHHHHhhhhhhhhhc--ceeeeCCCCC-cc-CCCCCHHHHHHHHHHc---
Q 026543 94 ELMPGASHLIRHLHAKGIPMCVATGSLARHFELKTQKHRELFSLM--HHVVRGDDPE-VK-QGKPSPDIFLAAAKRF--- 166 (237)
Q Consensus 94 ~~~~~~~~~l~~l~~~g~~v~i~s~~~~~~~~~~~~~~~gl~~~f--~~~~~~~~~~-~~-~~kp~~~~~~~~l~~~--- 166 (237)
...||+.+||+.+.+. +.++|.|.+...+.. .+++.++....+ ...+..+.+. .. ..+..+..+.+-|+.+
T Consensus 164 ~~RP~l~eFL~~l~~~-yeivIfTas~~~ya~-~vld~Ld~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~vKdLs~Lw~~ 241 (320)
T 3shq_A 164 LMRPYLHEFLTSAYED-YDIVIWSATSMRWIE-EKMRLLGVASNDNYKVMFYLDSTAMISVHVPERGVVDVKPLGVIWAL 241 (320)
T ss_dssp HBCTTHHHHHHHHHHH-EEEEEECSSCHHHHH-HHHHHTTCTTCSSCCCCEEECGGGCEEEEETTTEEEEECCHHHHHHH
T ss_pred EeCCCHHHHHHHHHhC-CEEEEEcCCcHHHHH-HHHHHhCCCCCcceeEEEEEcCCccccccccCCCCEEEEEhHHhhcc
Confidence 4889999999999966 999999997776655 567766654442 2112112000 00 0011111233445555
Q ss_pred --CCCCCCCCcEEEEecCHHHHHHHHHcCCe
Q 026543 167 --EGGPIDSQEILVFEDAPSGVLAAKNAGMS 195 (237)
Q Consensus 167 --~~~~~~~~~~~~igD~~~Di~~a~~~G~~ 195 (237)
| .+++++++|+|++.-..+....|+.
T Consensus 242 ~p~---rdl~~tIiIDdsp~~~~~~p~NgI~ 269 (320)
T 3shq_A 242 YKQ---YNSSNTIMFDDIRRNFLMNPKSGLK 269 (320)
T ss_dssp CTT---CCGGGEEEEESCGGGGTTSGGGEEE
T ss_pred cCC---CChhHEEEEeCChHHhccCcCceEE
Confidence 7 8999999999999888777777743
|
| >2fue_A PMM 1, PMMH-22, phosphomannomutase 1; enzyme-product complex, protein glycosyl carbohydrate-deficient glycoprotein syndrome; HET: MSE M1P; 1.75A {Homo sapiens} SCOP: c.108.1.10 PDB: 2fuc_A* | Back alignment and structure |
|---|
Probab=97.57 E-value=3.2e-05 Score=58.88 Aligned_cols=64 Identities=6% Similarity=-0.064 Sum_probs=49.3
Q ss_pred cCCCCCHHHHHHHHHHcCCCCCCCCcEEEEec----CHHHHHHHHHcCCeEEEEcCCCCCcccccchhhhhhhhcc
Q 026543 150 KQGKPSPDIFLAAAKRFEGGPIDSQEILVFED----APSGVLAAKNAGMSVVMVPDPRLDSSYHSNADQLLSSLLG 221 (237)
Q Consensus 150 ~~~kp~~~~~~~~l~~~~~~~~~~~~~~~igD----~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~~~~e 221 (237)
..+..|..+++.+ +| ++++++++||| +.||++|.+.+|...+.| ++..+..+..+++++.+..+
T Consensus 193 ~~~vsKg~al~~l---~g---i~~~~viafGDs~~~~~NDi~Ml~~~~~~g~av--~NA~~~~k~~a~~v~~~~~~ 260 (262)
T 2fue_A 193 PEGWDKRYCLDSL---DQ---DSFDTIHFFGNETSPGGNDFEIFADPRTVGHSV--VSPQDTVQRCREIFFPETAH 260 (262)
T ss_dssp ETTCSTTHHHHHH---TT---SCCSEEEEEESCCSTTSTTHHHHHSTTSEEEEC--SSHHHHHHHHHHHHCTTC--
T ss_pred cCCCCHHHHHHHH---HC---CCHHHEEEECCCCCCCCCCHHHHhcCccCcEEe--cCCCHHHHHhhheeCCCCcC
Confidence 3455678888888 89 99999999999 899999999998655555 56656667778888766543
|
| >2zos_A MPGP, mannosyl-3-phosphoglycerate phosphatase; haloacid dehalogenase like hydrolase, mannosylglycerate, cytoplasm, hydrolase, magnesium; 1.70A {Pyrococcus horikoshii} PDB: 1wzc_A | Back alignment and structure |
|---|
Probab=97.40 E-value=0.00017 Score=54.37 Aligned_cols=34 Identities=18% Similarity=0.227 Sum_probs=23.9
Q ss_pred HHHHHHHHhCCCCEEEEeCChhhHHHHHHhhhhhh
Q 026543 100 SHLIRHLHAKGIPMCVATGSLARHFELKTQKHREL 134 (237)
Q Consensus 100 ~~~l~~l~~~g~~v~i~s~~~~~~~~~~~~~~~gl 134 (237)
.+.|+.|+++|++++++|++...... .+++.+++
T Consensus 23 ~~~l~~l~~~g~~~~i~Tgr~~~~~~-~~~~~~~~ 56 (249)
T 2zos_A 23 KPIIEELKDMGFEIIFNSSKTRAEQE-YYRKELEV 56 (249)
T ss_dssp HHHHHHHHHTTEEEEEBCSSCHHHHH-HHHHHHTC
T ss_pred HHHHHHHHHCCCEEEEEeCCCHHHHH-HHHHHcCC
Confidence 35677788899999999997765544 34555554
|
| >2amy_A PMM 2, phosphomannomutase 2; HS.459855, HS.313504, BC008310, phosphatase, PFAM PF03332, H superfamily, jaecken disease; 2.09A {Homo sapiens} SCOP: c.108.1.10 PDB: 2q4r_A | Back alignment and structure |
|---|
Probab=97.24 E-value=0.00013 Score=54.86 Aligned_cols=56 Identities=7% Similarity=-0.107 Sum_probs=39.6
Q ss_pred CCCCCHHHHHHHHHHcCCCCCCCCcEEEEec----CHHHHHHHHHcCCeEEEEcCCCCCcccccchhh
Q 026543 151 QGKPSPDIFLAAAKRFEGGPIDSQEILVFED----APSGVLAAKNAGMSVVMVPDPRLDSSYHSNADQ 214 (237)
Q Consensus 151 ~~kp~~~~~~~~l~~~~~~~~~~~~~~~igD----~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~ 214 (237)
.+..|..+++.+ +| ++++++++||| +.||++|.+.+|.. +++.++..+..+..+++
T Consensus 185 ~~~~Kg~al~~l---~~---i~~~~viafGD~~~~~~ND~~Ml~~a~~a--g~av~Na~~~vk~~A~~ 244 (246)
T 2amy_A 185 DGWDKRYCLRHV---EN---DGYKTIYFFGDKTMPGGNDHEIFTDPRTM--GYSVTAPEDTRRICELL 244 (246)
T ss_dssp TTCSGGGGGGGT---TT---SCCSEEEEEECSCC---CCCHHHHCTTEE--EEECSSHHHHHHHHHHH
T ss_pred CCCchHHHHHHH---hC---CCHHHEEEECCCCCCCCCcHHHHHhCCcc--eEEeeCCCHHHHHHHhh
Confidence 444566777777 88 99999999999 99999999999843 45555554444555554
|
| >2fue_A PMM 1, PMMH-22, phosphomannomutase 1; enzyme-product complex, protein glycosyl carbohydrate-deficient glycoprotein syndrome; HET: MSE M1P; 1.75A {Homo sapiens} SCOP: c.108.1.10 PDB: 2fuc_A* | Back alignment and structure |
|---|
Probab=96.80 E-value=0.00049 Score=52.22 Aligned_cols=33 Identities=21% Similarity=0.305 Sum_probs=23.3
Q ss_pred CCCccEEEEecCcccccchhhHHHHHHHHHHHc
Q 026543 7 KKPITHVIFDMDGLLLDTEKFYTEVQELILARY 39 (237)
Q Consensus 7 ~~~~~~vifD~DGTL~~~~~~~~~~~~~~~~~~ 39 (237)
+.++|+|+||+||||+++...+.....++++++
T Consensus 10 ~~~~kli~~DlDGTLl~~~~~is~~~~~al~~l 42 (262)
T 2fue_A 10 RKERVLCLFDVDGTLTPARQKIDPEVAAFLQKL 42 (262)
T ss_dssp ---CEEEEEESBTTTBSTTSCCCHHHHHHHHHH
T ss_pred ccCeEEEEEeCccCCCCCCCcCCHHHHHHHHHH
Confidence 345899999999999988766555555555554
|
| >1u02_A Trehalose-6-phosphate phosphatase related protein; structural genomics, PSI; 1.92A {Thermoplasma acidophilum} SCOP: c.108.1.15 | Back alignment and structure |
|---|
Probab=96.78 E-value=0.00097 Score=49.86 Aligned_cols=43 Identities=7% Similarity=-0.008 Sum_probs=33.7
Q ss_pred CCCCCHHHHHHHHHHcCCCCCCCCcEEEEecCHHHHHHHHHc--CCeEEEEcCCCC
Q 026543 151 QGKPSPDIFLAAAKRFEGGPIDSQEILVFEDAPSGVLAAKNA--GMSVVMVPDPRL 204 (237)
Q Consensus 151 ~~kp~~~~~~~~l~~~~~~~~~~~~~~~igD~~~Di~~a~~~--G~~~i~v~~~~~ 204 (237)
.+..|..+++.+++++| +++|||+.||++|.+.+ | ..|.+++.
T Consensus 157 ~~~~Kg~al~~l~~~~g--------via~GD~~ND~~Ml~~a~~g---~~vam~Na 201 (239)
T 1u02_A 157 PGVNKGSAIRSVRGERP--------AIIAGDDATDEAAFEANDDA---LTIKVGEG 201 (239)
T ss_dssp TTCCHHHHHHHHHTTSC--------EEEEESSHHHHHHHHTTTTS---EEEEESSS
T ss_pred CCCCHHHHHHHHHhhCC--------eEEEeCCCccHHHHHHhhCC---cEEEECCC
Confidence 34456788888887775 89999999999999999 9 44555555
|
| >2amy_A PMM 2, phosphomannomutase 2; HS.459855, HS.313504, BC008310, phosphatase, PFAM PF03332, H superfamily, jaecken disease; 2.09A {Homo sapiens} SCOP: c.108.1.10 PDB: 2q4r_A | Back alignment and structure |
|---|
Probab=96.72 E-value=0.00014 Score=54.72 Aligned_cols=33 Identities=21% Similarity=0.274 Sum_probs=24.8
Q ss_pred CCCccEEEEecCcccccchhhHHHHHHHHHHHc
Q 026543 7 KKPITHVIFDMDGLLLDTEKFYTEVQELILARY 39 (237)
Q Consensus 7 ~~~~~~vifD~DGTL~~~~~~~~~~~~~~~~~~ 39 (237)
.+++|+|+||+||||+++...+.....++++++
T Consensus 3 ~~~~kli~~DlDGTLl~~~~~i~~~~~~al~~l 35 (246)
T 2amy_A 3 APGPALCLFDVDGTLTAPRQKITKEMDDFLQKL 35 (246)
T ss_dssp -CCSEEEEEESBTTTBCTTSCCCHHHHHHHHHH
T ss_pred CCCceEEEEECCCCcCCCCcccCHHHHHHHHHH
Confidence 456899999999999988766655556666554
|
| >1s2o_A SPP, sucrose-phosphatase; phosphohydrolase, HAD superfamily, cyanobacteria; 1.40A {Synechocystis SP} SCOP: c.108.1.10 PDB: 1tj3_A 1tj4_A* 1tj5_A* 1u2s_A* 1u2t_A* 2b1q_A* 2b1r_A* 2d2v_A* | Back alignment and structure |
|---|
Probab=96.03 E-value=0.0043 Score=46.45 Aligned_cols=26 Identities=19% Similarity=0.206 Sum_probs=17.9
Q ss_pred cEEEEecCcccccchhhHHHHHHHHHH
Q 026543 11 THVIFDMDGLLLDTEKFYTEVQELILA 37 (237)
Q Consensus 11 ~~vifD~DGTL~~~~~~~~~~~~~~~~ 37 (237)
.+|+||+||||+++.... ....++++
T Consensus 4 ~li~~DlDGTLl~~~~~~-~~~~~~l~ 29 (244)
T 1s2o_A 4 LLLISDLDNTWVGDQQAL-EHLQEYLG 29 (244)
T ss_dssp EEEEECTBTTTBSCHHHH-HHHHHHHH
T ss_pred eEEEEeCCCCCcCCHHHH-HHHHHHHH
Confidence 399999999999877443 33334443
|
| >3kc2_A Uncharacterized protein YKR070W; HAD-like, mitochondral protein, PSI, MCSG, structural genomi protein structure initiative; HET: MSE; 1.55A {Saccharomyces cerevisiae} PDB: 3rf6_A* | Back alignment and structure |
|---|
Probab=95.88 E-value=0.036 Score=43.89 Aligned_cols=85 Identities=16% Similarity=0.139 Sum_probs=58.4
Q ss_pred CCccHHHHHHHHHhCCCCEEEEeCChh---hHHHHHHhhhhhhhhhcceeeeCCCCCccCCCCCHHHHHHHHHHcCCCCC
Q 026543 95 LMPGASHLIRHLHAKGIPMCVATGSLA---RHFELKTQKHRELFSLMHHVVRGDDPEVKQGKPSPDIFLAAAKRFEGGPI 171 (237)
Q Consensus 95 ~~~~~~~~l~~l~~~g~~v~i~s~~~~---~~~~~~~~~~~gl~~~f~~~~~~~~~~~~~~kp~~~~~~~~l~~~~~~~~ 171 (237)
+.|++.++++.|+++|++++++||+.. ......+.+.+|+....+.++++. .... ..++ .
T Consensus 30 ~~p~a~~~l~~l~~~g~~~~~vTNn~~~~~~~~~~~l~~~lgi~~~~~~i~ts~--~~~~---------~~~~--~---- 92 (352)
T 3kc2_A 30 PIAGASDALKLLNRNKIPYILLTNGGGFSERARTEFISSKLDVDVSPLQIIQSH--TPYK---------SLVN--K---- 92 (352)
T ss_dssp ECTTHHHHHHHHHHTTCCEEEECSCCSSCHHHHHHHHHHHHTSCCCGGGEECTT--GGGG---------GGTT--T----
T ss_pred eCcCHHHHHHHHHHCCCEEEEEeCCCCCCchHHHHHHHHhcCCCCChhhEeehH--HHHH---------HHHh--c----
Confidence 678999999999999999999999753 333444444678876677777665 2110 0111 1
Q ss_pred CCCcEEEEecCHHHHHHHHHcCCeEEE
Q 026543 172 DSQEILVFEDAPSGVLAAKNAGMSVVM 198 (237)
Q Consensus 172 ~~~~~~~igD~~~Di~~a~~~G~~~i~ 198 (237)
.+.+++||-. .-.+.++.+|++.+.
T Consensus 93 -~~~v~viG~~-~l~~~l~~~G~~~v~ 117 (352)
T 3kc2_A 93 -YSRILAVGTP-SVRGVAEGYGFQDVV 117 (352)
T ss_dssp -CSEEEEESST-THHHHHHHHTCSEEE
T ss_pred -CCEEEEECCH-HHHHHHHhCCCeEec
Confidence 2578888855 556778889998775
|
| >1u02_A Trehalose-6-phosphate phosphatase related protein; structural genomics, PSI; 1.92A {Thermoplasma acidophilum} SCOP: c.108.1.15 | Back alignment and structure |
|---|
Probab=95.87 E-value=0.0035 Score=46.80 Aligned_cols=14 Identities=29% Similarity=0.662 Sum_probs=12.4
Q ss_pred ccEEEEecCccccc
Q 026543 10 ITHVIFDMDGLLLD 23 (237)
Q Consensus 10 ~~~vifD~DGTL~~ 23 (237)
+++|+||+||||++
T Consensus 1 ikli~~DlDGTLl~ 14 (239)
T 1u02_A 1 MSLIFLDYDGTLVP 14 (239)
T ss_dssp -CEEEEECBTTTBC
T ss_pred CeEEEEecCCCCcC
Confidence 57999999999997
|
| >3geb_A EYES absent homolog 2; hydrolase, activator, alternative splicing, cytoplasm, developmental protein, magnesium, nucleus, polymorphism; 2.40A {Homo sapiens} PDB: 3hb0_A 3hb1_A | Back alignment and structure |
|---|
Probab=95.43 E-value=0.21 Score=37.04 Aligned_cols=93 Identities=13% Similarity=0.066 Sum_probs=62.4
Q ss_pred HHHHHHHHHhC-CCCEEEEeCChhhHHHHHHhhhhhhhhhcc--eeeeCCCCCccCCCCCHHHHHHHHHHcCCCCCCCCc
Q 026543 99 ASHLIRHLHAK-GIPMCVATGSLARHFELKTQKHRELFSLMH--HVVRGDDPEVKQGKPSPDIFLAAAKRFEGGPIDSQE 175 (237)
Q Consensus 99 ~~~~l~~l~~~-g~~v~i~s~~~~~~~~~~~~~~~gl~~~f~--~~~~~~~~~~~~~kp~~~~~~~~l~~~~~~~~~~~~ 175 (237)
+...|..+.++ ++--+++|++.--....+ +-..|+..+|. .|+++- .+ .|...|+++.+++| +...
T Consensus 164 a~k~L~~i~sr~~~vNVLVTs~qLVPaLaK-~LLygL~~~fpieNIYSa~--ki----GKesCFerI~~RFG----~k~~ 232 (274)
T 3geb_A 164 SLKALNLINSRPNCVNVLVTTTQLIPALAK-VLLYGLGSVFPIENIYSAT--KT----GKESCFERIMQRFG----RKAV 232 (274)
T ss_dssp HHHHHHHHHHSTTEEEEEEESSCHHHHHHH-HHHTTCTTTSCGGGEEETT--TT----CHHHHHHHHHHHHC----TTSE
T ss_pred HHHHHHhhccCCceeEEEEecCchHHHHHH-HHHhhcccceecccccchh--hc----CHHHHHHHHHHHhC----CCce
Confidence 34445555544 344566666443332222 22346666664 566655 22 35889999999998 5577
Q ss_pred EEEEecCHHHHHHHHHcCCeEEEEcCC
Q 026543 176 ILVFEDAPSGVLAAKNAGMSVVMVPDP 202 (237)
Q Consensus 176 ~~~igD~~~Di~~a~~~G~~~i~v~~~ 202 (237)
-++|||+...-++|+..+|+++-|+..
T Consensus 233 yvvIGDG~eEe~AAk~~n~PFwrI~~h 259 (274)
T 3geb_A 233 YVVIGDGVEEEQGAKKHNMPFWRISCH 259 (274)
T ss_dssp EEEEESSHHHHHHHHHTTCCEEECCSH
T ss_pred EEEECCCHHHHHHHHHcCCCeEEeecC
Confidence 888999999999999999999988653
|
| >3ef1_A RNA polymerase II subunit A C-terminal domain phosphatase; CTD, FCPH, BRCT, hydrolase, BEF3, acylphosphate analog, cobalt, magnesium; HET: BFD; 2.15A {Schizosaccharomyces pombe} | Back alignment and structure |
|---|
Probab=95.17 E-value=0.027 Score=45.72 Aligned_cols=93 Identities=13% Similarity=0.158 Sum_probs=63.6
Q ss_pred CCCCccHHHHHHHHHhCCCCEEEEeCChhhHHHHHHhhhhhhhh-hcce-eeeCCCCCccCCCCCHHHHHHHHHHc-CCC
Q 026543 93 SELMPGASHLIRHLHAKGIPMCVATGSLARHFELKTQKHRELFS-LMHH-VVRGDDPEVKQGKPSPDIFLAAAKRF-EGG 169 (237)
Q Consensus 93 ~~~~~~~~~~l~~l~~~g~~v~i~s~~~~~~~~~~~~~~~gl~~-~f~~-~~~~~~~~~~~~kp~~~~~~~~l~~~-~~~ 169 (237)
+...||+.+||+.+.+ .+.++|+|.+...+.. .+++.+.... +|.. +++.+ ..+. .+.+-|+++ |
T Consensus 82 V~~RPgl~eFL~~ls~-~yEivIfTas~~~YA~-~Vl~~LDp~~~~f~~Rl~sRd--~cg~------~~~KdL~~ll~-- 149 (442)
T 3ef1_A 82 IKFRPGLAQFLQKISE-LYELHIYTMGTKAYAK-EVAKIIDPTGKLFQDRVLSRD--DSGS------LAQKSLRRLFP-- 149 (442)
T ss_dssp EEECTTHHHHHHHHTT-TEEEEEECSSCHHHHH-HHHHHHCTTSTTTTTCEECTT--TSSC------SSCCCGGGTCS--
T ss_pred EEeCCCHHHHHHHHhC-CcEEEEEcCCCHHHHH-HHHHHhccCCccccceEEEec--CCCC------ceeeehHHhcC--
Confidence 7789999999999995 4999999997776655 5677766655 6765 55555 3321 122235544 8
Q ss_pred CCCCCcEEEEecCHHHHHHHHHcCCeEEEEcCC
Q 026543 170 PIDSQEILVFEDAPSGVLAAKNAGMSVVMVPDP 202 (237)
Q Consensus 170 ~~~~~~~~~igD~~~Di~~a~~~G~~~i~v~~~ 202 (237)
.+.+++++|+|++.-.. .+ . ..|.|...
T Consensus 150 -rdl~~vvIIDd~p~~~~-~~--p-N~I~I~~~ 177 (442)
T 3ef1_A 150 -CDTSMVVVIDDRGDVWD-WN--P-NLIKVVPY 177 (442)
T ss_dssp -SCCTTEEEEESCSGGGT-TC--T-TEEECCCC
T ss_pred -CCcceEEEEECCHHHhC-CC--C-CEEEcCCc
Confidence 89999999999985332 22 2 45666554
|
| >2hx1_A Predicted sugar phosphatases of the HAD superfamily; ZP_00311070.1, possible sugar phosphatase, structural genomics; HET: MSE EPE; 2.10A {Cytophaga hutchinsonii} | Back alignment and structure |
|---|
Probab=94.57 E-value=0.012 Score=44.88 Aligned_cols=49 Identities=18% Similarity=0.356 Sum_probs=35.1
Q ss_pred CCccHHHHHHHHHhCCCCEEEEeCC---hhhHHHHHHhhhhhhh-hhcceeeeC
Q 026543 95 LMPGASHLIRHLHAKGIPMCVATGS---LARHFELKTQKHRELF-SLMHHVVRG 144 (237)
Q Consensus 95 ~~~~~~~~l~~l~~~g~~v~i~s~~---~~~~~~~~~~~~~gl~-~~f~~~~~~ 144 (237)
+.+++.+.++.++++|++++++||+ ...... ..++.+|+. ..++.++++
T Consensus 31 ~~~~~~~~l~~l~~~g~~~~~~Tn~~~r~~~~~~-~~l~~lg~~~~~~~~ii~~ 83 (284)
T 2hx1_A 31 LLPGIENTFDYLKAQGQDYYIVTNDASRSPEQLA-DSYHKLGLFSITADKIISS 83 (284)
T ss_dssp ECTTHHHHHHHHHHTTCEEEEEECCCSSCHHHHH-HHHHHTTCTTCCGGGEEEH
T ss_pred eChhHHHHHHHHHHCCCEEEEEeCCCCcCHHHHH-HHHHHCCcCCCCHhhEEcH
Confidence 5678889999999999999999983 233333 345666776 556666654
|
| >1zjj_A Hypothetical protein PH1952; alpha/beta hydrolase fold, HAD superfamily, structural genom riken structural genomics/proteomics initiative; 1.85A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=93.95 E-value=0.15 Score=38.24 Aligned_cols=84 Identities=18% Similarity=0.228 Sum_probs=53.4
Q ss_pred CccHHHHHHHHHhCCCCEEEEeCChhhHHHH--HHhhhhhhhhhcceeeeCCCCCccCCCCCHHHHHHHHHHcCCCCCCC
Q 026543 96 MPGASHLIRHLHAKGIPMCVATGSLARHFEL--KTQKHRELFSLMHHVVRGDDPEVKQGKPSPDIFLAAAKRFEGGPIDS 173 (237)
Q Consensus 96 ~~~~~~~l~~l~~~g~~v~i~s~~~~~~~~~--~~~~~~gl~~~f~~~~~~~~~~~~~~kp~~~~~~~~l~~~~~~~~~~ 173 (237)
.+++.++++.++++|++++++||+....... ..++.+|+....+.++++. ......+++.. +.
T Consensus 19 ~~~~~~~l~~l~~~g~~~~~~T~r~~~~~~~~~~~l~~lg~~~~~~~i~~~~-----------~~~~~~l~~~~----~~ 83 (263)
T 1zjj_A 19 IPGVRELIEFLKERGIPFAFLTNNSTKTPEMYREKLLKMGIDVSSSIIITSG-----------LATRLYMSKHL----DP 83 (263)
T ss_dssp CTTHHHHHHHHHHHTCCEEEEESCCSSCHHHHHHHHHTTTCCCCGGGEEEHH-----------HHHHHHHHHHS----CC
T ss_pred CccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHCCCCCChhhEEecH-----------HHHHHHHHHhC----CC
Confidence 4788899999999999999999976533221 2233456654445565443 23444555543 24
Q ss_pred CcEEEEecCHHHHHHHHHcCCe
Q 026543 174 QEILVFEDAPSGVLAAKNAGMS 195 (237)
Q Consensus 174 ~~~~~igD~~~Di~~a~~~G~~ 195 (237)
.++.++|.. ...+.++..|+.
T Consensus 84 ~~v~viG~~-~l~~~l~~~G~~ 104 (263)
T 1zjj_A 84 GKIFVIGGE-GLVKEMQALGWG 104 (263)
T ss_dssp CCEEEESCH-HHHHHHHHHTSC
T ss_pred CEEEEEcCH-HHHHHHHHcCCe
Confidence 678888874 566677777764
|
| >3f9r_A Phosphomannomutase; trypanosome glycobiology structural genomics, isomerase, structural genomics consortium, SGC; 1.85A {Trypanosoma brucei} SCOP: c.108.1.0 PDB: 2i54_A* 2i55_A* | Back alignment and structure |
|---|
Probab=92.60 E-value=0.064 Score=40.10 Aligned_cols=29 Identities=21% Similarity=0.307 Sum_probs=21.7
Q ss_pred CCccEEEEecCcccccchhhHHHHHHHHH
Q 026543 8 KPITHVIFDMDGLLLDTEKFYTEVQELIL 36 (237)
Q Consensus 8 ~~~~~vifD~DGTL~~~~~~~~~~~~~~~ 36 (237)
|++|+|+||+||||+++...+.....+++
T Consensus 2 M~~kli~~DlDGTLl~~~~~i~~~~~~~l 30 (246)
T 3f9r_A 2 MKRVLLLFDVDGTLTPPRLCQTDEMRALI 30 (246)
T ss_dssp CCSEEEEECSBTTTBSTTSCCCHHHHHHH
T ss_pred CCceEEEEeCcCCcCCCCCccCHHHHHHH
Confidence 35899999999999998765544444444
|
| >2q5c_A NTRC family transcriptional regulator; structural genomics, protein structure initiative; HET: SO4 GOL; 1.49A {Clostridium acetobutylicum atcc 824} | Back alignment and structure |
|---|
Probab=90.67 E-value=0.86 Score=32.67 Aligned_cols=90 Identities=8% Similarity=0.011 Sum_probs=51.0
Q ss_pred cHHHHHHHHHhCCCCEEEEeCChhhHHHHHHhhhhhhhhhcceeeeCCCCCccCCCCCHHHHHHHHHHcCCCCCCCCcEE
Q 026543 98 GASHLIRHLHAKGIPMCVATGSLARHFELKTQKHRELFSLMHHVVRGDDPEVKQGKPSPDIFLAAAKRFEGGPIDSQEIL 177 (237)
Q Consensus 98 ~~~~~l~~l~~~g~~v~i~s~~~~~~~~~~~~~~~gl~~~f~~~~~~~~~~~~~~kp~~~~~~~~l~~~~~~~~~~~~~~ 177 (237)
++...|..+++.+-++++++......-...+.+.+++. +......+ . -+......-+++-| ++ +
T Consensus 82 Dil~al~~a~~~~~kIavvg~~~~~~~~~~~~~ll~~~--i~~~~~~~--~-----~e~~~~i~~l~~~G---~~----v 145 (196)
T 2q5c_A 82 DTMRAVYNAKRFGNELALIAYKHSIVDKHEIEAMLGVK--IKEFLFSS--E-----DEITTLISKVKTEN---IK----I 145 (196)
T ss_dssp HHHHHHHHHGGGCSEEEEEEESSCSSCHHHHHHHHTCE--EEEEEECS--G-----GGHHHHHHHHHHTT---CC----E
T ss_pred HHHHHHHHHHhhCCcEEEEeCcchhhHHHHHHHHhCCc--eEEEEeCC--H-----HHHHHHHHHHHHCC---Ce----E
Confidence 55666666677777899998654433223344444432 12111111 0 01122223333444 33 6
Q ss_pred EEecCHHHHHHHHHcCCeEEEEcCCCC
Q 026543 178 VFEDAPSGVLAAKNAGMSVVMVPDPRL 204 (237)
Q Consensus 178 ~igD~~~Di~~a~~~G~~~i~v~~~~~ 204 (237)
+|||+.. ...|++.|++++.+.++..
T Consensus 146 vVG~~~~-~~~A~~~Gl~~vli~sg~e 171 (196)
T 2q5c_A 146 VVSGKTV-TDEAIKQGLYGETINSGEE 171 (196)
T ss_dssp EEECHHH-HHHHHHTTCEEEECCCCHH
T ss_pred EECCHHH-HHHHHHcCCcEEEEecCHH
Confidence 8998876 6789999999999987644
|
| >1qyi_A ZR25, hypothetical protein; structural genomics, PSI, protein structure initiative, NORT structural genomics consortium, NESG; 2.50A {Staphylococcus aureus subsp} SCOP: c.108.1.13 | Back alignment and structure |
|---|
Probab=90.59 E-value=0.19 Score=40.19 Aligned_cols=22 Identities=27% Similarity=0.751 Sum_probs=17.3
Q ss_pred ccEEEEecCcccccchhhHHHH
Q 026543 10 ITHVIFDMDGLLLDTEKFYTEV 31 (237)
Q Consensus 10 ~~~vifD~DGTL~~~~~~~~~~ 31 (237)
+|.|+||+|||+++-...+..+
T Consensus 1 ~~~~~fdvdgv~~~~~~~~d~~ 22 (384)
T 1qyi_A 1 MKKILFDVDGVFLSEERCFDVS 22 (384)
T ss_dssp CCEEEECSBTTTBCSHHHHHHH
T ss_pred CceEEEecCceeechhhhccHH
Confidence 4899999999999877655433
|
| >3pdw_A Uncharacterized hydrolase YUTF; structural genomics, PSI2, NYSGXRC, protein structure initia YORK SGX research center for structural genomics; 1.60A {Bacillus subtilis} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=89.92 E-value=2.4 Score=31.52 Aligned_cols=45 Identities=16% Similarity=0.292 Sum_probs=29.8
Q ss_pred ccHHHHHHHHHhCCCCEEEEeCChh---hHHHHHHhhhhhhhhhcceee
Q 026543 97 PGASHLIRHLHAKGIPMCVATGSLA---RHFELKTQKHRELFSLMHHVV 142 (237)
Q Consensus 97 ~~~~~~l~~l~~~g~~v~i~s~~~~---~~~~~~~~~~~gl~~~f~~~~ 142 (237)
|++.++++.++++|++++++||++. ..+. ..++.+|+....+.++
T Consensus 25 ~~~~~ai~~l~~~Gi~v~laTgrs~r~~~~~~-~~l~~lg~~~~~~~ii 72 (266)
T 3pdw_A 25 EEACEFVRTLKDRGVPYLFVTNNSSRTPKQVA-DKLVSFDIPATEEQVF 72 (266)
T ss_dssp HHHHHHHHHHHHTTCCEEEEESCCSSCHHHHH-HHHHHTTCCCCGGGEE
T ss_pred ccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHH-HHHHHcCCCCCHHHcc
Confidence 4567889999999999999999433 3233 3455556644344444
|
| >3qgm_A P-nitrophenyl phosphatase (PHO2); structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 2.00A {Archaeoglobus fulgidus} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=89.76 E-value=0.31 Score=36.44 Aligned_cols=48 Identities=10% Similarity=0.093 Sum_probs=33.7
Q ss_pred CCccHHHHHHHHHhCCCCEEEEeCC---hhhHHHHHHhhhhhhhhhcceeee
Q 026543 95 LMPGASHLIRHLHAKGIPMCVATGS---LARHFELKTQKHRELFSLMHHVVR 143 (237)
Q Consensus 95 ~~~~~~~~l~~l~~~g~~v~i~s~~---~~~~~~~~~~~~~gl~~~f~~~~~ 143 (237)
+.|++.+.|+.++++|++++++||+ ....+. ..++.+|+....+.+++
T Consensus 25 ~~~~~~~ai~~l~~~Gi~v~l~Tgr~~r~~~~~~-~~l~~lg~~~~~~~ii~ 75 (268)
T 3qgm_A 25 PIPEGVEGVKKLKELGKKIIFVSNNSTRSRRILL-ERLRSFGLEVGEDEILV 75 (268)
T ss_dssp ECHHHHHHHHHHHHTTCEEEEEECCSSSCHHHHH-HHHHHTTCCCCGGGEEE
T ss_pred eCcCHHHHHHHHHHcCCeEEEEeCcCCCCHHHHH-HHHHHCCCCCCHHHeeC
Confidence 4577889999999999999999994 333333 34556676544455554
|
| >3epr_A Hydrolase, haloacid dehalogenase-like family; structural genomics, unknown function, HAD superfamily hydro PSI-2; 1.55A {Streptococcus agalactiae serogroup V} SCOP: c.108.1.14 PDB: 1ys9_A 1wvi_A 1ydf_A | Back alignment and structure |
|---|
Probab=89.68 E-value=2.1 Score=31.83 Aligned_cols=47 Identities=19% Similarity=0.319 Sum_probs=31.9
Q ss_pred ccHHHHHHHHHhCCCCEEEEeCChhhH--HHHHHhhhhhhhhhcceeee
Q 026543 97 PGASHLIRHLHAKGIPMCVATGSLARH--FELKTQKHRELFSLMHHVVR 143 (237)
Q Consensus 97 ~~~~~~l~~l~~~g~~v~i~s~~~~~~--~~~~~~~~~gl~~~f~~~~~ 143 (237)
|++.++++.++++|++++++||+.... .....++.+|+....+.+++
T Consensus 24 ~~~~eal~~l~~~G~~vvl~Tn~~gr~~~~~~~~l~~lg~~~~~~~ii~ 72 (264)
T 3epr_A 24 PAGERFIERLQEKGIPYMLVTNNTTRTPESVQEMLRGFNVETPLETIYT 72 (264)
T ss_dssp HHHHHHHHHHHHHTCCEEEEECCCSSCHHHHHHHHHTTTCCCCGGGEEE
T ss_pred cCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHCCCCCChhheec
Confidence 788899999999999999999743322 12234556666544454544
|
| >2hhl_A CTD small phosphatase-like protein; CTD phosphatase, keggins anion, structural genomics, PSI, protein structure initiative; HET: KEG; 2.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=87.36 E-value=0.22 Score=35.81 Aligned_cols=17 Identities=24% Similarity=0.405 Sum_probs=14.8
Q ss_pred CccEEEEecCcccccch
Q 026543 9 PITHVIFDMDGLLLDTE 25 (237)
Q Consensus 9 ~~~~vifD~DGTL~~~~ 25 (237)
+.+++++|+||||+.+.
T Consensus 27 ~k~~LVLDLD~TLvhs~ 43 (195)
T 2hhl_A 27 GKKCVVIDLDETLVHSS 43 (195)
T ss_dssp TCCEEEECCBTTTEEEE
T ss_pred CCeEEEEccccceEccc
Confidence 46899999999999875
|
| >2ght_A Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1; protein-peptide complex, HAD superfamily, hydrolase; HET: SEP; 1.80A {Homo sapiens} PDB: 2ghq_A* 3pgl_A* 1t9z_A* 1ta0_A* 3l0c_A 3l0y_A 3l0b_A* 2q5e_A | Back alignment and structure |
|---|
Probab=85.07 E-value=0.34 Score=34.30 Aligned_cols=18 Identities=17% Similarity=0.342 Sum_probs=15.2
Q ss_pred CCccEEEEecCcccccch
Q 026543 8 KPITHVIFDMDGLLLDTE 25 (237)
Q Consensus 8 ~~~~~vifD~DGTL~~~~ 25 (237)
.+.+++++|+|+||+.+.
T Consensus 13 ~~k~~LVLDLD~TLvhs~ 30 (181)
T 2ght_A 13 SDKICVVINLDETLVHSS 30 (181)
T ss_dssp TTSCEEEECCBTTTEEEE
T ss_pred CCCeEEEECCCCCeECCc
Confidence 346899999999999875
|
| >2pju_A Propionate catabolism operon regulatory protein; structural genomics, PRPR, transcriptional regulation, PSI- 2, protein structure initiative; 2.10A {Escherichia coli} SCOP: c.92.3.1 | Back alignment and structure |
|---|
Probab=84.26 E-value=2.4 Score=31.06 Aligned_cols=87 Identities=11% Similarity=-0.002 Sum_probs=48.4
Q ss_pred cHHHHHHHHHhCCCCEEEEeCChhhHHHHHHhhhhhhhhhcceeeeCCCCCccCCCCCHHHHHHHHHHcCCCCCCCCcEE
Q 026543 98 GASHLIRHLHAKGIPMCVATGSLARHFELKTQKHRELFSLMHHVVRGDDPEVKQGKPSPDIFLAAAKRFEGGPIDSQEIL 177 (237)
Q Consensus 98 ~~~~~l~~l~~~g~~v~i~s~~~~~~~~~~~~~~~gl~~~f~~~~~~~~~~~~~~kp~~~~~~~~l~~~~~~~~~~~~~~ 177 (237)
++...|..+++.+-++++++......-...+.+.+++. +...... +++-....++++. -+. --+
T Consensus 94 Dil~aL~~a~~~~~kIavVg~~~~~~~~~~i~~ll~~~--i~~~~~~----------~~ee~~~~i~~l~---~~G-~~v 157 (225)
T 2pju_A 94 DVLQFLAKAGKLTSSIGVVTYQETIPALVAFQKTFNLR--LDQRSYI----------TEEDARGQINELK---ANG-TEA 157 (225)
T ss_dssp HHHHHHHHTTCTTSCEEEEEESSCCHHHHHHHHHHTCC--EEEEEES----------SHHHHHHHHHHHH---HTT-CCE
T ss_pred HHHHHHHHHHhhCCcEEEEeCchhhhHHHHHHHHhCCc--eEEEEeC----------CHHHHHHHHHHHH---HCC-CCE
Confidence 44444455555567899998755443333344443332 1111111 1333444444443 122 236
Q ss_pred EEecCHHHHHHHHHcCCeEEEEcC
Q 026543 178 VFEDAPSGVLAAKNAGMSVVMVPD 201 (237)
Q Consensus 178 ~igD~~~Di~~a~~~G~~~i~v~~ 201 (237)
+|||+.. ...|++.|++++.+.+
T Consensus 158 VVG~~~~-~~~A~~~Gl~~vlI~s 180 (225)
T 2pju_A 158 VVGAGLI-TDLAEEAGMTGIFIYS 180 (225)
T ss_dssp EEESHHH-HHHHHHTTSEEEESSC
T ss_pred EECCHHH-HHHHHHcCCcEEEECC
Confidence 8998876 6789999999999973
|
| >2nn4_A Hypothetical protein YQGQ; novel fold, PFAM:DUF910, structural genomics, PSI-2, protein structure initiative; 2.10A {Bacillus subtilis} SCOP: a.272.1.1 | Back alignment and structure |
|---|
Probab=83.19 E-value=0.37 Score=28.14 Aligned_cols=28 Identities=18% Similarity=0.096 Sum_probs=23.3
Q ss_pred HHHHHHHHHcCCCCCCCCcEEEEecCHHHHHHHHH
Q 026543 157 DIFLAAAKRFEGGPIDSQEILVFEDAPSGVLAAKN 191 (237)
Q Consensus 157 ~~~~~~l~~~~~~~~~~~~~~~igD~~~Di~~a~~ 191 (237)
.-.+++++++| -.|++||+..|+++...
T Consensus 6 YDVqQLLK~fG-------~~IY~GdR~~DielM~~ 33 (72)
T 2nn4_A 6 YDVQQLLKTFG-------HIVYFGDRELEIEFMLD 33 (72)
T ss_dssp HHHHHHHHTTT-------CCCCCSCHHHHHHHHHH
T ss_pred HHHHHHHHHCC-------EEEEeCChHHHHHHHHH
Confidence 34678999999 57999999999998753
|
| >2oyc_A PLP phosphatase, pyridoxal phosphate phosphatase; structural genomics, NYSGXRC, NEW YORK SGX research center for structural genomics, PSI-2; 1.72A {Homo sapiens} PDB: 2p27_A 2p69_A* 2cft_A* 2cfs_A 2cfr_A* | Back alignment and structure |
|---|
Probab=82.15 E-value=1.6 Score=33.45 Aligned_cols=40 Identities=15% Similarity=0.179 Sum_probs=28.2
Q ss_pred CCccHHHHHHHHHhCCCCEEEEeCCh---hhHHHHHHhhhhhhh
Q 026543 95 LMPGASHLIRHLHAKGIPMCVATGSL---ARHFELKTQKHRELF 135 (237)
Q Consensus 95 ~~~~~~~~l~~l~~~g~~v~i~s~~~---~~~~~~~~~~~~gl~ 135 (237)
+.+++.+.++.|+++|++++++||+. ..... ..++.+|+.
T Consensus 38 ~~~~~~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~-~~~~~~g~~ 80 (306)
T 2oyc_A 38 AVPGAPELLERLARAGKAALFVSNNSRRARPELA-LRFARLGFG 80 (306)
T ss_dssp ECTTHHHHHHHHHHTTCEEEEEECCCSSCHHHHH-HHHHHTTCC
T ss_pred cCcCHHHHHHHHHHCCCeEEEEECCCCCCHHHHH-HHHHhcCCC
Confidence 55788899999999999999999743 22222 334555554
|
| >1rkq_A Hypothetical protein YIDA; two domain structure with beta-alpha sandwich. stucture contains A magnesium ION., PSI, protein structure initiative; 1.40A {Escherichia coli} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=80.52 E-value=1.9 Score=32.58 Aligned_cols=39 Identities=18% Similarity=0.238 Sum_probs=28.6
Q ss_pred CccHHHHHHHHHhCCCCEEEEeCChhhHHHHHHhhhhhhh
Q 026543 96 MPGASHLIRHLHAKGIPMCVATGSLARHFELKTQKHRELF 135 (237)
Q Consensus 96 ~~~~~~~l~~l~~~g~~v~i~s~~~~~~~~~~~~~~~gl~ 135 (237)
.+...+.|+.++++|+.++++|++...... .+++.+++.
T Consensus 24 ~~~~~~aL~~l~~~Gi~vviaTGR~~~~~~-~~~~~l~l~ 62 (282)
T 1rkq_A 24 SPAVKNAIAAARARGVNVVLTTGRPYAGVH-NYLKELHME 62 (282)
T ss_dssp CHHHHHHHHHHHHTTCEEEEECSSCGGGTH-HHHHHTTCC
T ss_pred CHHHHHHHHHHHHCCCEEEEEcCCCHHHHH-HHHHHhCCC
Confidence 345568889999999999999998776544 345555554
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 237 | ||||
| d1te2a_ | 218 | c.108.1.6 (A:) Phosphatase YniC {Escherichia coli | 2e-20 | |
| d2b0ca1 | 197 | c.108.1.2 (A:8-204) Putative phosphatase YihX {Esc | 7e-18 | |
| d1swva_ | 257 | c.108.1.3 (A:) Phosphonoacetaldehyde hydrolase {Ba | 1e-17 | |
| d2fi1a1 | 187 | c.108.1.3 (A:4-190) Putative hydrolase SP0805 {Str | 1e-16 | |
| d1cr6a1 | 222 | c.108.1.2 (A:4-225) Epoxide hydrolase, N-terminal | 1e-16 | |
| d1qq5a_ | 245 | c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Xan | 1e-15 | |
| d1zd3a1 | 225 | c.108.1.2 (A:2-224) Epoxide hydrolase, N-terminal | 1e-15 | |
| d2fdra1 | 222 | c.108.1.6 (A:3-224) Hypothetical protein Atu0790 { | 3e-15 | |
| d1o08a_ | 221 | c.108.1.6 (A:) beta-Phosphoglucomutase {Lactococcu | 2e-14 | |
| d2hcfa1 | 228 | c.108.1.6 (A:2-229) Hypothetical protein CT1708 {C | 4e-14 | |
| d1zs9a1 | 253 | c.108.1.22 (A:4-256) E-1 enzyme {Human(Homo sapien | 1e-13 | |
| d2go7a1 | 204 | c.108.1.6 (A:3-206) Hypothetical protein SP2064 {S | 1e-13 | |
| d2g80a1 | 225 | c.108.1.22 (A:17-241) Protein UTR4 {Baker's yeast | 1e-12 | |
| d2hdoa1 | 207 | c.108.1.6 (A:1-207) Phosphoglycolate phosphatase { | 5e-12 | |
| d1u7pa_ | 164 | c.108.1.17 (A:) Magnesium-dependent phosphatase-1, | 2e-11 | |
| d1x42a1 | 230 | c.108.1.1 (A:1-230) Hypothetical protein PH0459 {A | 2e-11 | |
| d1zrna_ | 220 | c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Pse | 6e-11 | |
| d1qyia_ | 380 | c.108.1.13 (A:) Hypothetical protein MW1667 (SA154 | 3e-10 | |
| d1qyia_ | 380 | c.108.1.13 (A:) Hypothetical protein MW1667 (SA154 | 5e-06 | |
| d2feaa1 | 226 | c.108.1.20 (A:2-227) 2-hydroxy-3-keto-5-methylthio | 6e-10 | |
| d2gfha1 | 247 | c.108.1.6 (A:1-247) N-acylneuraminate-9-phosphatas | 4e-08 | |
| d2hsza1 | 224 | c.108.1.6 (A:1-224) Phosphoglycolate phosphatase G | 1e-07 | |
| d2ah5a1 | 210 | c.108.1.6 (A:1-210) predicted phosphatase SP0104 { | 4e-07 | |
| d1j97a_ | 210 | c.108.1.4 (A:) Phosphoserine phosphatase {Archaeon | 1e-06 | |
| d1nnla_ | 217 | c.108.1.4 (A:) Phosphoserine phosphatase {Human (H | 8e-06 | |
| d1l6ra_ | 225 | c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPa | 5e-05 | |
| d1ltqa1 | 149 | c.108.1.9 (A:153-301) Polynucleotide kinase, phosp | 7e-04 | |
| d2b82a1 | 209 | c.108.1.12 (A:4-212) Class B acid phosphatase, Aph | 7e-04 |
| >d1te2a_ c.108.1.6 (A:) Phosphatase YniC {Escherichia coli [TaxId: 562]} Length = 218 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphatase YniC species: Escherichia coli [TaxId: 562]
Score = 84.1 bits (206), Expect = 2e-20
Identities = 41/221 (18%), Positives = 79/221 (35%), Gaps = 8/221 (3%)
Query: 8 KPITHVIFDMDGLLLDTEKFYTEVQELILARYNKTFDW-SLKAKMMGKKAIEAAQVFVEE 66
+ I IFDMDGLL+D+E + + ++A + +G + ++
Sbjct: 1 RQILAAIFDMDGLLIDSEPLWDRAELDVMASLGVDISRRNELPDTLGLRIDMVVDLWYAR 60
Query: 67 TGISDKLSAEDFLVQREETLQTLFPTSELMPGASHLIRHLHAKGIPMCVATGSLARHFEL 126
+ E + + T L+P + + + + A +
Sbjct: 61 QPWNGPSRQEVVERVIARAISLVEETRPLLP---GVREAVALCKEQGLLVGLASASPLHM 117
Query: 127 KTQKHRELFSLMHHVVRGDDPEVKQGKPSPDIFLAAAKRFEGGPIDSQEILVFEDAPSGV 186
+ ++ KP P ++L A + +D + ED+ +G+
Sbjct: 118 LEKVLTMFDLRDSFDALASAEKLPYSKPHPQVYLDCAAKL---GVDPLTCVALEDSVNGM 174
Query: 187 LAAKNAGMSVVMVPDP-RLDSSYHSNADQLLSSLLGFNPKD 226
+A+K A M ++VP P + A+ LSSL KD
Sbjct: 175 IASKAARMRSIVVPAPEAQNDPRFVLANVKLSSLTELTAKD 215
|
| >d2b0ca1 c.108.1.2 (A:8-204) Putative phosphatase YihX {Escherichia coli [TaxId: 562]} Length = 197 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: YihX-like domain: Putative phosphatase YihX species: Escherichia coli [TaxId: 562]
Score = 76.7 bits (187), Expect = 7e-18
Identities = 30/192 (15%), Positives = 64/192 (33%), Gaps = 9/192 (4%)
Query: 13 VIFDMDGLLLDTEKFYTEVQELILARYNKTFDWSLKAKMMGK--KAIEAAQVFVEETGIS 70
IFD+ +++D + + V K+ MG+ E ++ E +
Sbjct: 3 YIFDLGNVIVDID--FNRVLGAWSDLTRIPLASLKKSFHMGEAFHQHERGEISDEAFAEA 60
Query: 71 DKLSAEDFLVQREETLQTLFPTSELMPGASHLIRHLHAKGIPMCVATGSLARHFELKTQK 130
L + + L P ++ L +G + V + + H ++
Sbjct: 61 LCHEMALPLSYEQFSHGWQAVFVALRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEE 120
Query: 131 HRELFSLMHHVVRGDDPEVKQGKPSPDIFLAAAKRFEGGPIDSQEILVFEDAPSGVLAAK 190
+ E+ H+ D KP I+ + P + + F+D + A
Sbjct: 121 YPEIRDAADHIYLSQDL--GMRKPEARIYQHVLQAEGFSP---SDTVFFDDNADNIEGAN 175
Query: 191 NAGMSVVMVPDP 202
G++ ++V D
Sbjct: 176 QLGITSILVKDK 187
|
| >d1swva_ c.108.1.3 (A:) Phosphonoacetaldehyde hydrolase {Bacillus cereus [TaxId: 1396]} Length = 257 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphonoacetaldehyde hydrolase-like domain: Phosphonoacetaldehyde hydrolase species: Bacillus cereus [TaxId: 1396]
Score = 77.1 bits (188), Expect = 1e-17
Identities = 39/203 (19%), Positives = 62/203 (30%), Gaps = 17/203 (8%)
Query: 10 ITHVIFDMDGLLLDTEKF-YTEVQELILARYNKTFDWSLKAKMMGKKAIEAAQVFVEETG 68
I VIF G +D F EV I + K MG I+ + E
Sbjct: 2 IEAVIFAWAGTTVDYGCFAPLEVFMEIFHKRGVAITAEEARKPMGLLKIDHVRALTEMPR 61
Query: 69 ------------ISDKLSAEDFLVQREETLQTLFPTSELMPGASHLIRHLHAKGIPMCVA 116
++ E + E L + + G +I L +GI +
Sbjct: 62 IASEWNRVFRQLPTEADIQEMYEEFEEILFAILPRYASPINGVKEVIASLRERGIKIGST 121
Query: 117 TGSLARHFELKTQKHRELFSLMHHVVRGDDPEVKQGKPSPDIFLAAAKRFEGGPIDSQEI 176
TG ++ ++ +V DD + P + A G +
Sbjct: 122 TGYTREMMDIVAKEAALQGYKPDFLVTPDDVPAGRPY--PWMCYKNAMEL--GVYPMNHM 177
Query: 177 LVFEDAPSGVLAAKNAGMSVVMV 199
+ D S + +NAGM V V
Sbjct: 178 IKVGDTVSDMKEGRNAGMWTVGV 200
|
| >d2fi1a1 c.108.1.3 (A:4-190) Putative hydrolase SP0805 {Streptococcus pneumoniae [TaxId: 1313]} Length = 187 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphonoacetaldehyde hydrolase-like domain: Putative hydrolase SP0805 species: Streptococcus pneumoniae [TaxId: 1313]
Score = 73.2 bits (178), Expect = 1e-16
Identities = 33/193 (17%), Positives = 63/193 (32%), Gaps = 17/193 (8%)
Query: 10 ITHVIFDMDGLLLDTEKFYTEVQELILARYNKTFDWSLKAKMMGKKAIEAAQVFVEETGI 69
I+D+ G LLD + T LA Y T D + + +V
Sbjct: 3 YHDYIWDLGGTLLDNYETSTAAFVETLALYGITQDHDSVYQAL--------KVSTPFAIE 54
Query: 70 SDKLSAEDFLVQREETLQTLFPTSELMPGASHLIRHLHAKGIPMCVATGSLARHFELKTQ 129
+ + E+FL + +E L G S L+ + +G + + + +
Sbjct: 55 TFAPNLENFLEKYKENEARELEHPILFEGVSDLLEDISNQGGRHFLVS----HRNDQVLE 110
Query: 130 KHRELFSLMHHVVRGDDPEVKQGKPSPDIFLAAAKRFEGGPIDSQEILVFEDAPSGVLAA 189
+ + + KP+P+ L +++ LV D P + A
Sbjct: 111 ILEKTSIAAYFTEVVTSSSGFKRKPNPESMLYLREKY-----QISSGLVIGDRPIDIEAG 165
Query: 190 KNAGMSVVMVPDP 202
+ AG+ +
Sbjct: 166 QAAGLDTHLFTSI 178
|
| >d1cr6a1 c.108.1.2 (A:4-225) Epoxide hydrolase, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]} Length = 222 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: YihX-like domain: Epoxide hydrolase, N-terminal domain species: Mouse (Mus musculus) [TaxId: 10090]
Score = 73.6 bits (179), Expect = 1e-16
Identities = 33/230 (14%), Positives = 66/230 (28%), Gaps = 28/230 (12%)
Query: 13 VIFDMDGLLLDTEKFYTEVQELILARYNKTFDWSLKAKMMGKKAIEAAQVFVEETGISDK 72
FD+DG+L D+ L A Q+ + S
Sbjct: 3 AAFDLDGVLALPSIA--GAFRRSEEALALPRDFLLGAYQTEFPEGPTEQLMKGKITFSQW 60
Query: 73 LSAEDFLVQRE---------------ETLQTLFPTSELMPGASHLIRHLHAKGIPMCVAT 117
+ D ++ + + L KG C+ T
Sbjct: 61 VPLMDESYRKSSKACGANLPENFSISQIFSQAMAARSINRPMLQAAIALKKKGFTTCIVT 120
Query: 118 GSLARHFELKTQKHRELFSLMHHVVRGDDPE-VKQGKPSPDIFLAAAKRFEGGPIDSQEI 176
+ + + + + L H + V KP P I+ + E+
Sbjct: 121 NNWLDDGDKRDSLAQMMCELSQHFDFLIESCQVGMIKPEPQIYNFLLDTLK---AKPNEV 177
Query: 177 LVFEDAPSGVLAAKNAGMSVVMVPDPRLDSSYHSNADQLLSSLLGFNPKD 226
+ +D S + A++ GM ++V + ++A + L + G +
Sbjct: 178 VFLDDFGSNLKPARDMGMVTILVHNT-------ASALRELEKVTGTQFPE 220
|
| >d1qq5a_ c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Xanthobacter autotrophicus [TaxId: 280]} Length = 245 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: HAD-related domain: L-2-Haloacid dehalogenase, HAD species: Xanthobacter autotrophicus [TaxId: 280]
Score = 71.7 bits (174), Expect = 1e-15
Identities = 29/231 (12%), Positives = 57/231 (24%), Gaps = 11/231 (4%)
Query: 10 ITHVIFDMDGLLLDTEKFYTEVQELILARYNKTFDWSLKAKMMGKKAIEAAQVFVEETGI 69
I V+FD G L D + + R + ++ + + +
Sbjct: 2 IKAVVFDAYGTLFDVQSVADATERAYPGRGEYITQVWRQKQLEYSWLRALMGRYADFWSV 61
Query: 70 S----DKLSAEDFLVQREETLQTLFPTSELMPGASHLIRHLHA-KGIPMCVATGSLARHF 124
+ L E L + + + L + + +
Sbjct: 62 TREALAYTLGTLGLEPDESFLADMAQAYNRLTPYPDAAQCLAELAPLKRAILSNGAPDML 121
Query: 125 ELKTQKHRELFSLMHHVVRGDDPEVKQGKPSPDIFLAAAKRFEGGPIDSQEILVFEDAPS 184
+ + KP PD + + + E+L
Sbjct: 122 QALVANA---GLTDSFDAVISVDAKRVFKPHPDSYALVEEVLG---VTPAEVLFVSSNGF 175
Query: 185 GVLAAKNAGMSVVMVPDPRLDSSYHSNADQLLSSLLGFNPKDWGLPPFEDA 235
V AKN G SV V ++ ++ L F + +A
Sbjct: 176 DVGGAKNFGFSVARVARLSQEALARELVSGTIAPLTMFKALRMREETYAEA 226
|
| >d1zd3a1 c.108.1.2 (A:2-224) Epoxide hydrolase, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 225 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: YihX-like domain: Epoxide hydrolase, N-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Score = 71.0 bits (172), Expect = 1e-15
Identities = 32/209 (15%), Positives = 63/209 (30%), Gaps = 21/209 (10%)
Query: 10 ITHVIFDMDGLLLDTEKFYTEVQELILARYNKTF----------DWSLKAKMMGKKAIEA 59
+ +FD+DG+L F + + + + M G+ +
Sbjct: 2 LRAAVFDLDGVLALPAVFGVLGRTEEALALPRGLLNDAFQKGGPEGATTRLMKGEITLSQ 61
Query: 60 AQVFVEETGISDKLSAEDFLVQR---EETLQTLFPTSELMPGASHLIRHLHAKGIPMCVA 116
+EE +A+ L + +E ++ L KG +
Sbjct: 62 WIPLMEENCRKCSETAKVCLPKNFSIKEIFDKAISARKINRPMLQAALMLRKKGFTTAIL 121
Query: 117 TG---SLARHFELKTQKHRELFSLMHHVVRGDDPEVKQGKPSPDIFLAAAKRFEGGPIDS 173
T + Q EL ++ V KP P I+
Sbjct: 122 TNTWLDDRAERDGLAQLMCELKMHFDFLIESCQ--VGMVKPEPQIYKFLLDTL---KASP 176
Query: 174 QEILVFEDAPSGVLAAKNAGMSVVMVPDP 202
E++ +D + + A++ GM ++V D
Sbjct: 177 SEVVFLDDIGANLKPARDLGMVTILVQDT 205
|
| >d2fdra1 c.108.1.6 (A:3-224) Hypothetical protein Atu0790 {Agrobacterium tumefaciens [TaxId: 358]} Length = 222 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein Atu0790 species: Agrobacterium tumefaciens [TaxId: 358]
Score = 70.3 bits (170), Expect = 3e-15
Identities = 41/213 (19%), Positives = 78/213 (36%), Gaps = 13/213 (6%)
Query: 13 VIFDMDGLLLDTEKFYTEVQELILARYNKTFDWSLKAKMMGKKAIEAAQVFVEETGISDK 72
+IFD DG+L+D+E +V+ +L + + + VE
Sbjct: 5 IIFDCDGVLVDSEIIAAQVESRLLTEAGYPISVEEMGERFAGMTWKNILLQVESEASIPL 64
Query: 73 LSAEDFLVQREETLQTLFPTSELMPGASHLIRHLHAKGIPMCVATGSLARHFELKTQKHR 132
++ ++ ++ + + L P C+ + S + ++ K
Sbjct: 65 SASLLDKSEKLLDMRLERDVKIID----GVKFALSRLTTPRCICSNSSSHRLDMMLTKVG 120
Query: 133 ELFSLMHHVVRGDDPEVKQGKPSPDIFLAAAKRFEGGPIDSQEILVFEDAPSGVLAAKNA 192
H+ D + KP PDIFL A +F P ++V ED+ G+ A+ A
Sbjct: 121 LKPYFAPHIYSAKDLGADRVKPKPDIFLHGAAQFGVSP---DRVVVVEDSVHGIHGARAA 177
Query: 193 GMSVVMVPDPRLDSSYH------SNADQLLSSL 219
GM V+ H + A+ ++S +
Sbjct: 178 GMRVIGFTGASHTYPSHADRLTDAGAETVISRM 210
|
| >d1o08a_ c.108.1.6 (A:) beta-Phosphoglucomutase {Lactococcus lactis [TaxId: 1358]} Length = 221 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: beta-Phosphoglucomutase species: Lactococcus lactis [TaxId: 1358]
Score = 68.0 bits (164), Expect = 2e-14
Identities = 39/198 (19%), Positives = 77/198 (38%), Gaps = 13/198 (6%)
Query: 10 ITHVIFDMDGLLLDTEKFYTEVQELILARYN-KTFDWSLKAKMMGKKAIEAAQVFVEETG 68
V+FD+DG++ DT +++ + + D ++ G ++ Q ++
Sbjct: 2 FKAVLFDLDGVITDTAEYHFRAWKALAEEIGINGVDRQFNEQLKGVSREDSLQKILDLAD 61
Query: 69 ISDKLSAEDFLVQREE----TLQTLFPTSELMPGASHLIRHLHAKGIPMCVATGSLARHF 124
L +R+ + +++ PG L++ L + I + +A+ S F
Sbjct: 62 KKVSAEEFKELAKRKNDNYVKMIQDVSPADVYPGILQLLKDLRSNKIKIALASASKNGPF 121
Query: 125 ELKTQKHRELFSLMHHVVRGDDPEVKQGKPSPDIFLAAAKRFEGGPIDSQEILVFEDAPS 184
L+ F + + PDIF+AAA P E + ED+ +
Sbjct: 122 LLERMNLTGYFDAIADPAEVAASKPA-----PDIFIAAAHAVGVAP---SESIGLEDSQA 173
Query: 185 GVLAAKNAGMSVVMVPDP 202
G+ A K++G + V P
Sbjct: 174 GIQAIKDSGALPIGVGRP 191
|
| >d2hcfa1 c.108.1.6 (A:2-229) Hypothetical protein CT1708 {Chlorobium tepidum [TaxId: 1097]} Length = 228 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein CT1708 species: Chlorobium tepidum [TaxId: 1097]
Score = 67.1 bits (162), Expect = 4e-14
Identities = 33/214 (15%), Positives = 59/214 (27%), Gaps = 9/214 (4%)
Query: 13 VIFDMDGLLLDTEKFYTEVQELILARYNKTFDWSLKAKMMGKKAIEAAQVFVEETGISDK 72
V+FD+DG LL E V L T + GK + G+
Sbjct: 5 VLFDIDGTLLKVESMNRRVLADALIEVYGTEGSTGSHDFSGKMDGAIIYEVLSNVGLERA 64
Query: 73 LSAEDFLVQREETLQ-----TLFPTSELMPGASHLIRHLHAKGIPMCVATGSLARHFELK 127
A+ F +E + L+ G L+ L ++ +
Sbjct: 65 EIADKFDKAKETYIALFRERARREDITLLEGVRELLDALSSRSDVLLGLLTGNFEASGRH 124
Query: 128 TQKHRELFSLMHHVVRGDDPEVKQGKPSPDIFLAAAKRFEGGPIDSQEILVFEDAPSGVL 187
K + + + P I L A+R G +I++ D +
Sbjct: 125 KLKLPGID--HYFPFGAFADDALDRNELPHIALERARRMTGANYSPSQIVIIGDTEHDIR 182
Query: 188 AAKNAGMSVVMVPDP--RLDSSYHSNADQLLSSL 219
A+ + V ++ L +
Sbjct: 183 CARELDARSIAVATGNFTMEELARHKPGTLFKNF 216
|
| >d1zs9a1 c.108.1.22 (A:4-256) E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]} Length = 253 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Enolase-phosphatase E1 domain: E-1 enzyme species: Human(Homo sapiens) [TaxId: 9606]
Score = 66.0 bits (159), Expect = 1e-13
Identities = 27/249 (10%), Positives = 62/249 (24%), Gaps = 43/249 (17%)
Query: 9 PITHVIFDMDGLLLDTEK--------FYTEVQELILARYNKTFDWSLKAKMMGKKAIEAA 60
+T ++ D++G V+E + + + + + + +A
Sbjct: 6 EVTVILLDIEGTTTPIAFVKDILFPYIEENVKEYLQTHWEEEECQQDVSLLRKQAEEDAH 65
Query: 61 QVFVEETGISDKLSAEDFLVQREETLQTLFP----------------------------T 92
+ +D + + +
Sbjct: 66 LDGAVPIPAASGNGVDDLQQMIQAVVDNVCWQMSLDRKTTALKQLQGHMWRAAFTAGRMK 125
Query: 93 SELMPGASHLIRHLHAKGIPMCVATGSLARHFELKTQKHRELFSLMHHVVRGDDPEVKQG 152
+E +R G+ + + + +L H ++ V D
Sbjct: 126 AEFFADVVPAVRKWREAGMKVYIYSSGSVEAQKLL-FGHSTEGDILELVDGHFD-TKIGH 183
Query: 153 KPSPDIFLAAAKRFEGGPIDSQEILVFEDAPSGVLAAKNAGMSVVMVPDP--RLDSSYHS 210
K + + A IL D AA+ A + V +V P +
Sbjct: 184 KVESESYRKIADSIGCST---NNILFLTDVTREASAAEEADVHVAVVVRPGNAGLTDDEK 240
Query: 211 NADQLLSSL 219
L++S
Sbjct: 241 TYYSLITSF 249
|
| >d2go7a1 c.108.1.6 (A:3-206) Hypothetical protein SP2064 {Streptococcus pneumoniae [TaxId: 1313]} Length = 204 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein SP2064 species: Streptococcus pneumoniae [TaxId: 1313]
Score = 65.2 bits (157), Expect = 1e-13
Identities = 38/210 (18%), Positives = 73/210 (34%), Gaps = 10/210 (4%)
Query: 11 THVIFDMDGLLLDTEKFYTEVQELILARYNKTFDWSLKAKMMGKKAIEAAQVFVEETGIS 70
T I+D+DG LLD+ + E A+++ +D + + K ++ Q +
Sbjct: 2 TAFIWDLDGTLLDSYEAILSGIEETFAQFSIPYDKEKVREFIFKYSV---QDLLVRVAED 58
Query: 71 DKLSAEDFLVQREETLQTLFPTSELMPGASHLIRHLHAKGIPMCVATGSLARHFELKTQK 130
L E R ++L LMPGA ++ GI + T F
Sbjct: 59 RNLDVEVLNQVRAQSLAEKNAQVVLMPGAREVLAWADESGIQQFIYTHKGNNAF----TI 114
Query: 131 HRELFSLMHHVVRGDDPEVKQGKPSPDIFLAAAKRFEGGPIDSQEILVFEDAPSGVLAAK 190
++L + KPSP+ +++ D V A+
Sbjct: 115 LKDLGVESYFTEILTSQSGFVRKPSPEAATYLLDKYQLNS---DNTYYIGDRTLDVEFAQ 171
Query: 191 NAGMSVVMVPDPRLDSSYHSNADQLLSSLL 220
N+G+ + + + ++ A +S +
Sbjct: 172 NSGIQSINFLESTYEGNHRIQALADISRIF 201
|
| >d2g80a1 c.108.1.22 (A:17-241) Protein UTR4 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 225 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Enolase-phosphatase E1 domain: Protein UTR4 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 62.9 bits (151), Expect = 1e-12
Identities = 24/223 (10%), Positives = 66/223 (29%), Gaps = 16/223 (7%)
Query: 10 ITHVIFDMDGLLLDTEK--------FYTEVQELILARYNKTFDWSLKAKMM--GKKAIEA 59
+ + D++G + F +V +L+ + ++ ++ K+ ++A
Sbjct: 3 YSTYLLDIEGTVCPISFVKETLFPYFTNKVPQLVQQDTRDSPVSNILSQFHIDNKEQLQA 62
Query: 60 AQVFVEETGISDKLSAEDFLVQREETLQTLFPTSELMPGASHLIRHLHAKGIPMCVATG- 118
+ + + D + + ++ + + A I+ I +
Sbjct: 63 HILELVAKDVKDPILKQLQGYVWAHGYESGQIKAPVYADAIDFIKRKKRVFIYSSGSVKA 122
Query: 119 --SLARHFELKTQKHRELFSLMHHVVRGDDPEVKQGKPSPDIFLAAAKRFEGGPIDSQEI 176
L + + + L ++ D K + + + E+
Sbjct: 123 QKLLFGYVQDPNAPAHDSLDLNSYIDGYFDINTSGKKTETQSYANILRDI---GAKASEV 179
Query: 177 LVFEDAPSGVLAAKNAGMSVVMVPDPRLDSSYHSNADQLLSSL 219
L D P + AA G++ + P Q+ +
Sbjct: 180 LFLSDNPLELDAAAGVGIATGLASRPGNAPVPDGQKYQVYKNF 222
|
| >d2hdoa1 c.108.1.6 (A:1-207) Phosphoglycolate phosphatase {Lactobacillus plantarum [TaxId: 1590]} Length = 207 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphoglycolate phosphatase species: Lactobacillus plantarum [TaxId: 1590]
Score = 61.1 bits (146), Expect = 5e-12
Identities = 35/212 (16%), Positives = 64/212 (30%), Gaps = 12/212 (5%)
Query: 9 PITHVIFDMDGLLLDTEKFYTEVQELILARYNKTFDWSLKAKMMGKKAIEAAQVFVEETG 68
++FD+DG L +++ YT V +LA Y K F + K A +A
Sbjct: 2 TYQALMFDIDGTLTNSQPAYTTVMREVLATYGKPFSPAQAQKTFPMAAEQAMTELGIAAS 61
Query: 69 ISDKLSAEDFLVQREETLQTLFPTSELMPGASHLIRHLHAKGIPMCVATGSLARHFELKT 128
D A+ + + + + EL PG + L L ++ + +
Sbjct: 62 EFDHFQAQYE-----DVMASHYDQIELYPGITSLFEQLPSELRLGI-------VTSQRRN 109
Query: 129 QKHRELFSLMHHVVRGDDPEVKQGKPSPDIFLAAAKRFEGGPIDSQEILVFEDAPSGVLA 188
+ + S + L E + Q L D+ S
Sbjct: 110 ELESGMRSYPFMMRMAVTISADDTPKRKPDPLPLLTALEKVNVAPQNALFIGDSVSDEQT 169
Query: 189 AKNAGMSVVMVPDPRLDSSYHSNADQLLSSLL 220
A+ A + + ++ H L
Sbjct: 170 AQAANVDFGLAVWGMDPNADHQKVAHRFQKPL 201
|
| >d1u7pa_ c.108.1.17 (A:) Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mus musculus) [TaxId: 10090]} Length = 164 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Magnesium-dependent phosphatase-1, Mdp1 domain: Magnesium-dependent phosphatase-1, Mdp1 species: Mouse (Mus musculus) [TaxId: 10090]
Score = 58.3 bits (140), Expect = 2e-11
Identities = 23/217 (10%), Positives = 57/217 (26%), Gaps = 60/217 (27%)
Query: 13 VIFDMDGLLLDTEKFYTEVQELILARYNKTFDWSLKAKMMGKKAIEAAQVFVEETGISDK 72
+FD+D L V + ++K+ D +++ +
Sbjct: 8 AVFDLDYTLWPFW-----VDTHVDPPFHKSSDGTVRDRRGQNI----------------- 45
Query: 73 LSAEDFLVQREETLQTLFPTSELMPGASHLIRHLHAKGIPMCVATGSLARHFELKTQKHR 132
+L P ++ L + G+P+ A+ + + +
Sbjct: 46 ---------------------QLYPEVPEVLGRLQSLGVPVAAASRTSEIQGANQLLELF 84
Query: 133 ELFSLMHHVVRGDDPEVKQGKPSPDIFLAAAKRFEGGPIDSQEILVFEDAPSGVLAAKNA 192
+L + F + +++ F+D ++
Sbjct: 85 DLGKYFIQREIYPGSK-------VTHFERLHHKTGVPF---SQMVFFDDENRNIIDVGRL 134
Query: 193 GMSVVMVPDPRLDSSYHSNADQLLSSLLGFNPKDWGL 229
G++ + + + L L F GL
Sbjct: 135 GVTCIHIR-------DGMSLQTLTQGLETFAKAQAGL 164
|
| >d1x42a1 c.108.1.1 (A:1-230) Hypothetical protein PH0459 {Archaeon Pyrococcus horikoshii [TaxId: 53953]} Length = 230 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: HAD-related domain: Hypothetical protein PH0459 species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Score = 59.5 bits (142), Expect = 2e-11
Identities = 30/224 (13%), Positives = 61/224 (27%), Gaps = 20/224 (8%)
Query: 10 ITHVIFDMDGLLLDTEKFYTEVQELILARYNK-------------TFDWSLKAKMMGKKA 56
I V FD G LL E +++ + GK
Sbjct: 2 IRAVFFDFVGTLLSVEGEAKTHLKIMEEVLGDYPLNPKTLLDEYEKLTREAFSNYAGKPY 61
Query: 57 IEAAQVFVEE-TGISDKLSAEDFLVQREETLQTLFPTSELMPGASHLIRHLHAKGIPMCV 115
+ E +++K + E L+ EL P +++ L K +
Sbjct: 62 RPIRDIEEEVMRKLAEKYGFKYPENFWEIHLRMHQRYGELYPEVVEVLKSLKGKYHVGMI 121
Query: 116 ATGSLARHFELKTQKHRELFSLMHHVVRGDDPEVKQGKPSPDIFLAAAKRFEGGPIDSQE 175
+ + + G P + + G +
Sbjct: 122 TDSDTEYLMAHLDALG------IKDLFDSITTSEEAGFFKPHPRIFELALKKAGVKGEEA 175
Query: 176 ILVFEDAPSGVLAAKNAGMSVVMVPDPRLDSSYHSNADQLLSSL 219
+ V ++ +KN GM+ +++ + D ++S L
Sbjct: 176 VYVGDNPVKDCGGSKNLGMTSILLDRKGEKREFWDKCDFIVSDL 219
|
| >d1zrna_ c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Pseudomonas sp., strain YL [TaxId: 306]} Length = 220 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: HAD-related domain: L-2-Haloacid dehalogenase, HAD species: Pseudomonas sp., strain YL [TaxId: 306]
Score = 58.0 bits (138), Expect = 6e-11
Identities = 27/218 (12%), Positives = 55/218 (25%), Gaps = 14/218 (6%)
Query: 10 ITHVIFDMDGLLLDTEKFYTEVQELILARYNKTFDWSLKAKMMGKKAIEAAQVFVEETGI 69
I + FD+ G L D E R + + ++ +V
Sbjct: 2 IKGIAFDLYGTLFDVHSVVGRCDEAFPGRGREISALWRQKQLEYTWLRSLMNRYVNFQQA 61
Query: 70 SDKLSAEDFLVQ-------REETLQTLFPTSELMPGASHLIRHLHAKGIPMCVATGSLAR 122
++ TL + +R L +G+ + + + +
Sbjct: 62 TEDALRFTCRHLGLDLDARTRSTLCDAYLRLAPFSEVPDSLRELKRRGLKLAILSNGSPQ 121
Query: 123 HFELKTQKHRELFSLMHHVVRGDDPEVKQGKPSPDIFLAAAKRFEGGPIDSQEILVFEDA 182
+ H + V+ KP ++ A + +D IL
Sbjct: 122 SIDAVVSHAGLRDGFDHLL---SVDPVQVYKPDNRVYELAEQAL---GLDRSAILFVASN 175
Query: 183 PSGVLAAKNAGMSVVMVPDPRLDS-SYHSNADQLLSSL 219
A+ G + D ++SL
Sbjct: 176 AWDATGARYFGFPTCWINRTGNVFEEMGQTPDWEVTSL 213
|
| >d1qyia_ c.108.1.13 (A:) Hypothetical protein MW1667 (SA1546) {Staphylococcus aureus [TaxId: 1280]} Length = 380 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Hypothetical protein MW1667 (SA1546) domain: Hypothetical protein MW1667 (SA1546) species: Staphylococcus aureus [TaxId: 1280]
Score = 56.7 bits (136), Expect = 3e-10
Identities = 26/221 (11%), Positives = 68/221 (30%), Gaps = 37/221 (16%)
Query: 5 SSKKPITHVIFDMDGLLLDTEKFYTEVQELILARYNKTFDWSLKAKMMGKKA----IEAA 60
+ + +V + + E+F T + A F + ++ +
Sbjct: 132 LPLQFLDNVKVGKNNIYAALEEFATTELHVSDAT---LFSLKGALWTLAQEVYQEWYLGS 188
Query: 61 QVFVEETGISDKLSAEDFLVQREETLQTLFPTSELMPGASHLIRHLHAKGIPMCVATGSL 120
+++ + + + + + +E L+ + L+ L G + +ATG
Sbjct: 189 KLYEDVEKKIARTTFKTGYIYQEIILRP-------VDEVKVLLNDLKGAGFELGIATGRP 241
Query: 121 ARHFE--LKTQKHRELFSLMHHVVRGDD---------PEVKQGKPSPDIFLAAAKRFEGG 169
+ F + D GKP+P ++AA
Sbjct: 242 YTETVVPFENLGLLPYFE-ADFIATASDVLEAENMYPQARPLGKPNPFSYIAALYGNNRD 300
Query: 170 P-----------IDSQEILVFEDAPSGVLAAKNAGMSVVMV 199
++ ++ + D+ + +L+A+ G + +
Sbjct: 301 KYESYINKQDNIVNKDDVFIVGDSLADLLSAQKIGATFIGT 341
|
| >d1qyia_ c.108.1.13 (A:) Hypothetical protein MW1667 (SA1546) {Staphylococcus aureus [TaxId: 1280]} Length = 380 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Hypothetical protein MW1667 (SA1546) domain: Hypothetical protein MW1667 (SA1546) species: Staphylococcus aureus [TaxId: 1280]
Score = 44.4 bits (104), Expect = 5e-06
Identities = 12/71 (16%), Positives = 32/71 (45%), Gaps = 6/71 (8%)
Query: 10 ITHVIFDMDGLLLDTEKFYTE----VQELILARYNKTFDWSLKAKMMGKKAIEA--AQVF 63
+ ++FD+DG+ L E+ + V EL++ + + + + I+ ++F
Sbjct: 1 MKKILFDVDGVFLSEERCFDVSALTVYELLMDKCYLGLHSHIDWETLTDNDIQDIRNRIF 60
Query: 64 VEETGISDKLS 74
++ ++ S
Sbjct: 61 QKDKILNKLKS 71
|
| >d2feaa1 c.108.1.20 (A:2-227) 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX {Bacillus subtilis [TaxId: 1423]} Length = 226 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: MtnX-like domain: 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX species: Bacillus subtilis [TaxId: 1423]
Score = 55.4 bits (132), Expect = 6e-10
Identities = 26/204 (12%), Positives = 61/204 (29%), Gaps = 28/204 (13%)
Query: 5 SSKKPITHVIFDMDGLLLDTEKFYTEVQELILARYNKTFDWSLKAKMMGKKAIEAAQVFV 64
+++KP +I D DG + + ++ + D L + K+ +
Sbjct: 1 TTRKPF--IICDFDGTITMNDNIINIMKTFAPPEWMALKDGVLSKTLSIKEGV------- 51
Query: 65 EETGISDKLSAEDFLVQREETLQTLFPTSELMPGASHLIRHLHAKGIPMCVATGSLARHF 124
++ +EE + +++ G + ++ IP V +G +
Sbjct: 52 ------GRMFGLLPSSLKEEITSFVLEDAKIREGFREFVAFINEHEIPFYVISGGMDFFV 105
Query: 125 E--LKTQKHRELFSLMHHVVRGDDPEVKQ--------GKPSPDIFLAAAKRFEGGPIDSQ 174
L+ ++ H D + + Q
Sbjct: 106 YPLLEGIVEKDRIYCNHASFDNDYIHIDWPHSCKGTCSNQCGCCKPSVIHELSEPN---Q 162
Query: 175 EILVFEDAPSGVLAAKNAGMSVVM 198
I++ D+ + V AAK + +
Sbjct: 163 YIIMIGDSVTDVEAAKLSDLCFAR 186
|
| >d2gfha1 c.108.1.6 (A:1-247) N-acylneuraminate-9-phosphatase NANP {Mouse (Mus musculus) [TaxId: 10090]} Length = 247 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: N-acylneuraminate-9-phosphatase NANP species: Mouse (Mus musculus) [TaxId: 10090]
Score = 50.2 bits (118), Expect = 4e-08
Identities = 34/233 (14%), Positives = 71/233 (30%), Gaps = 27/233 (11%)
Query: 8 KPITHVIFDMDGLLLDTEKFYTEVQELILARYNKTFDWSLKAKMMGKK------------ 55
+ V FD+D L+DT ++ + + +A+++ K
Sbjct: 4 SRVRAVFFDLDNTLIDTAGASRRGMLEVIKLLQSKYHYKEEAEIICDKVQVKLSKECFHP 63
Query: 56 ---AIEAAQVFVEETGISDKLSAEDFLVQREET----LQTLFPTSELMPGASHLIRHLHA 108
I + E I + D EE T L ++ L
Sbjct: 64 YSTCITDVRTSHWEEAIQETKGGADNRKLAEECYFLWKSTRLQHMILADDVKAMLTELRK 123
Query: 109 KGIPMCVATGSLARHFELKTQKHRELFSLMHHVVRGDDPEVKQGKPSPDIFLAAAKRFEG 168
+ + + + + +K + E K+ KP+P IF
Sbjct: 124 EVRLLLLTN----GDRQTQREKIEACACQSYFDAIVIGGEQKEEKPAPSIFYHCCDLLGV 179
Query: 169 GPIDSQEILVFEDAPSGVLAAKNAGMSVVMVPDP--RLDSSYHSNADQLLSSL 219
P ++V + + + NAG+ + + R+ + ++SS+
Sbjct: 180 QP--GDCVMVGDTLETDIQGGLNAGLKATVWINKSGRVPLTSSPMPHYMVSSV 230
|
| >d2hsza1 c.108.1.6 (A:1-224) Phosphoglycolate phosphatase Gph {Haemophilus somnus [TaxId: 731]} Length = 224 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphoglycolate phosphatase Gph species: Haemophilus somnus [TaxId: 731]
Score = 48.8 bits (114), Expect = 1e-07
Identities = 31/216 (14%), Positives = 58/216 (26%), Gaps = 15/216 (6%)
Query: 13 VIFDMDGLLLDTEKFYTEVQELILARYNKTFDWSLKAKMMGKKAIEAAQVFVEETG---- 68
+ FD+DG L+++ L N + +
Sbjct: 7 IGFDLDGTLVNSLPDLALSINSALKDVNLPQASENLVMTWIGNGADVLSQRAVDWACKQA 66
Query: 69 ---ISDKLSAEDFLVQREETLQTLFPTSELMPGASHLIRHLHAKGIPMCVATGSLARHFE 125
+++ + L S L P + L A+G + V T +H +
Sbjct: 67 EKELTEDEFKYFKRQFGFYYGENLCNISRLYPNVKETLEALKAQGYILAVVTNKPTKHVQ 126
Query: 126 LKTQKHRELFSLMHHVVRGDDPEVKQGKPSPDIFLAAAKRFEGGPIDSQEILVFEDAPSG 185
+ PE+K + +IL D+ +
Sbjct: 127 PILTAFGIDHLFSEMLGGQSLPEIKPHPAPFYYLCGKFGLYPK------QILFVGDSQND 180
Query: 186 VLAAKNAGMSVVMVPDP--RLDSSYHSNADQLLSSL 219
+ AA +AG +VV + S D +
Sbjct: 181 IFAAHSAGCAVVGLTYGYNYNIPIAQSKPDWIFDDF 216
|
| >d2ah5a1 c.108.1.6 (A:1-210) predicted phosphatase SP0104 {Streptococcus pneumoniae [TaxId: 1313]} Length = 210 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: predicted phosphatase SP0104 species: Streptococcus pneumoniae [TaxId: 1313]
Score = 47.1 bits (110), Expect = 4e-07
Identities = 25/215 (11%), Positives = 60/215 (27%), Gaps = 17/215 (7%)
Query: 8 KPITHVIFDMDGLLLDTEKFYTEVQELILARYN-KTFDWSLKAKMMGKKAIEAAQVFVEE 66
IT + FD+DG L+D+ + D MG + + +
Sbjct: 2 TSITAIFFDLDGTLVDSSIGIHNAFTYTFKELGVPSPDAKTIRGFMGPPLESSFATCLSK 61
Query: 67 TGISDKLSAEDFLVQREETLQTLFPTSELMPGASHLIRHLHAKGIPMCVATGSLARHFEL 126
IS+ + + + ++L P L+ L + T + ++
Sbjct: 62 DQISEAVQIYRSYYKAK-----GIYEAQLFPQIIDLLEELSSSYPLYITTTKDTSTAQDM 116
Query: 127 KTQKHRELFSLMHHVVRGDDPEVKQGKPSPDIFLAAAKRFEGGPIDSQEILVFEDAPSGV 186
F + + P + ++ ++ D +
Sbjct: 117 AKNLEIHHFFDGIYGSSPEAPHKADVIHQALQTH---------QLAPEQAIIIGDTKFDM 167
Query: 187 LAAKNAGMSVVMVPDPRLDSS--YHSNADQLLSSL 219
L A+ G+ + + + + + D +
Sbjct: 168 LGARETGIQKLAITWGFGEQADLLNYQPDYIAHKP 202
|
| >d1j97a_ c.108.1.4 (A:) Phosphoserine phosphatase {Archaeon Methanococcus jannaschii [TaxId: 2190]} Length = 210 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Score = 45.6 bits (106), Expect = 1e-06
Identities = 26/196 (13%), Positives = 59/196 (30%), Gaps = 17/196 (8%)
Query: 13 VIFDMDGLLLDTEKFYTEVQELILARYNKTFDWSLKAKMMGKKAIEAAQVFVEETGISDK 72
++FD D L++ E +E + K + + +V + +
Sbjct: 7 ILFDFDSTLVNNETIDEIAREAGVEEEVKKITKEAMEGKLNFEQSLRKRVSLLKD----- 61
Query: 73 LSAEDFLVQREETLQTLFPTSELMPGASHLIRHLHAKGIPMCVATGSLARHFELKTQKHR 132
E ++ GA I+ L +G + V +G +K
Sbjct: 62 --------LPIEKVEKAIKRITPTEGAEETIKELKNRGYVVAVVSGGFDIAVNKIKEKLG 113
Query: 133 ELFSLMHHVVRGD----DPEVKQGKPSPDIFLAAAKRFEGGPIDSQEILVFEDAPSGVLA 188
++ + ++ D + K + I+ ++ + D + +
Sbjct: 114 LDYAFANRLIVKDGKLTGDVEGEVLKENAKGEILEKIAKIEGINLEDTVAVGDGANDISM 173
Query: 189 AKNAGMSVVMVPDPRL 204
K AG+ + P L
Sbjct: 174 FKKAGLKIAFCAKPIL 189
|
| >d1nnla_ c.108.1.4 (A:) Phosphoserine phosphatase {Human (Homo sapiens) [TaxId: 9606]} Length = 217 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Human (Homo sapiens) [TaxId: 9606]
Score = 43.0 bits (100), Expect = 8e-06
Identities = 26/219 (11%), Positives = 56/219 (25%), Gaps = 19/219 (8%)
Query: 8 KPITHVIFDMDGLLLDTEKFYTEVQELILARYNKTFDWSLKAKMMGKKAIEAAQVFVEET 67
V FD+D ++ E LA+ M ++A+ A F
Sbjct: 8 YSADAVCFDVDSTVIREEGID------ELAKI---CGVEDAVSEMTRRAMGGAVPFKAAL 58
Query: 68 GISDKLSAEDFLVQREETLQTLFPTSELMPGASHLIRHLHAKGIPMCVATGSLARHFELK 127
L + + L PG L+ L + + + + +G E
Sbjct: 59 TERLALIQPSREQVQRLIAEQPP---HLTPGIRELVSRLQERNVQVFLISGGFRSIVEHV 115
Query: 128 TQKHRELFSLMHHVVRGDDPEVKQGKPSPDIFL------AAAKRFEGGPIDSQEILVFED 181
K + + + + ++I++ D
Sbjct: 116 ASKLNIPATNVFANRLKFYFNGEYAGFDETQPTAESGGKGKVIKLLKEKFHFKKIIMIGD 175
Query: 182 APSGVLAAKNAGMSVVMVPDPRLDSSYHSNADQLLSSLL 220
+ + A A + + NA ++ +
Sbjct: 176 GATDMEACPPADAFIGFGGNVIRQ-QVKDNAKWYITDFV 213
|
| >d1l6ra_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Archaeon Thermoplasma acidophilum [TaxId: 2303]} Length = 225 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Score = 40.7 bits (94), Expect = 5e-05
Identities = 27/197 (13%), Positives = 53/197 (26%), Gaps = 15/197 (7%)
Query: 10 ITHVIFDMDGLLLDTEKFYT-EVQELILARYNKTFDWSLKAKMMGKKAIEAAQVFVEETG 68
I D+DG L D ++ + + E I + K L ++ I G
Sbjct: 3 IRLAAIDVDGNLTDRDRLISTKAIESIRSAEKK----GLTVSLLSGNVIPVVYALKIFLG 58
Query: 69 ISDKLSAEDFLVQREETLQTLFPTSELMPGASHLIRHLHAKGIPMCVATGSLARHFELKT 128
I+ + E+ + + G + + + + + T R
Sbjct: 59 INGPVFGENGGIMFDN--DGSIKKFFSNEGTNKFLEEMSKRTSMRSILTNR-WREASTGF 115
Query: 129 QKHRELFSLMHHVVRGDDPEVKQGK-------PSPDIFLAAAKRFEGGPIDSQEILVFED 181
E + + D A K E ++ EILV D
Sbjct: 116 DIDPEDVDYVRKEAESRGFVIFYSGYSWHLMNRGEDKAFAVNKLKEMYSLEYDEILVIGD 175
Query: 182 APSGVLAAKNAGMSVVM 198
+ + + +
Sbjct: 176 SNNDMPMFQLPVRKACP 192
|
| >d1ltqa1 c.108.1.9 (A:153-301) Polynucleotide kinase, phosphatase domain {Bacteriophage T4 [TaxId: 10665]} Length = 149 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: phosphatase domain of polynucleotide kinase domain: Polynucleotide kinase, phosphatase domain species: Bacteriophage T4 [TaxId: 10665]
Score = 36.6 bits (84), Expect = 7e-04
Identities = 26/198 (13%), Positives = 44/198 (22%), Gaps = 59/198 (29%)
Query: 5 SSKKPITHVIFDMDGLLLDTEKFYTEVQELILARYNKTFDWSLKAKMMGKKAIEAAQVFV 64
+ KP VIFD+DG L +D
Sbjct: 3 TPGKPKA-VIFDVDGTLAKMNG-------------RGPYDL------------------- 29
Query: 65 EETGISDKLSAEDFLVQREETLQTLFPTSELMPGASHLIRHLHAKGIPMCVATG---SLA 121
T + P L + G + V +G
Sbjct: 30 -----------------------EKCDTDVINPMVVELSKMYALMGYQIVVVSGRESGTK 66
Query: 122 RHFELKTQKHRELFSLMHHVVRGDDPEVKQGKPSPDIFLAAAKRFEGGPIDSQEILVFED 181
+ R+ + V + +QG D + ++ L +D
Sbjct: 67 EDPTKYYRMTRKWVEDIAGVPLVMQCQREQGDTRKDDVVKEEIFWKHIAPHFDVKLAIDD 126
Query: 182 APSGVLAAKNAGMSVVMV 199
V + G+ V
Sbjct: 127 RTQVVEMWRRIGVECWQV 144
|
| >d2b82a1 c.108.1.12 (A:4-212) Class B acid phosphatase, AphA {Escherichia coli [TaxId: 562]} Length = 209 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Class B acid phosphatase, AphA domain: Class B acid phosphatase, AphA species: Escherichia coli [TaxId: 562]
Score = 37.3 bits (86), Expect = 7e-04
Identities = 24/206 (11%), Positives = 56/206 (27%), Gaps = 46/206 (22%)
Query: 7 KKPITHVIFDMDGLLLDT-EKFYTEVQELILARYNKTFDWSLKAKMMGKKAIEAAQVFVE 65
+ P+ V FD+D +L + F+ + + +
Sbjct: 33 RPPMA-VGFDIDDTVLFSSPGFWRGKKTFSPESEDYLKNPV------------------- 72
Query: 66 ETGISDKLSAEDFLVQREETLQTLFPTSELMPGASHLIRHLHAKGIPMCVATGSLARHFE 125
+ + + S A LI +G + TG E
Sbjct: 73 ---------FWEKMNNGWDE------FSIPKEVARQLIDMHVRRGDAIFFVTGRSPTKTE 117
Query: 126 LKTQKHRELFSLMHHVVRGDDPEVKQGKPSPDIFLAAAKRFEGGPIDSQEILVFEDAPSG 185
++ + F + + KP + + + + D+ +
Sbjct: 118 TVSKTLADNFHI--PATNMNPVIFAGDKPGQNTKSQWLQDKN-------IRIFYGDSDND 168
Query: 186 VLAAKNAGMSVVMVPDPRLDSSYHSN 211
+ AA++ G + + +S+Y
Sbjct: 169 ITAARDVGARGIRILRA-SNSTYKPL 193
|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 237 | |||
| d1te2a_ | 218 | Phosphatase YniC {Escherichia coli [TaxId: 562]} | 100.0 | |
| d2hdoa1 | 207 | Phosphoglycolate phosphatase {Lactobacillus planta | 100.0 | |
| d2hsza1 | 224 | Phosphoglycolate phosphatase Gph {Haemophilus somn | 100.0 | |
| d2go7a1 | 204 | Hypothetical protein SP2064 {Streptococcus pneumon | 100.0 | |
| d1o08a_ | 221 | beta-Phosphoglucomutase {Lactococcus lactis [TaxId | 100.0 | |
| d2ah5a1 | 210 | predicted phosphatase SP0104 {Streptococcus pneumo | 100.0 | |
| d1swva_ | 257 | Phosphonoacetaldehyde hydrolase {Bacillus cereus [ | 100.0 | |
| d2fdra1 | 222 | Hypothetical protein Atu0790 {Agrobacterium tumefa | 100.0 | |
| d2fi1a1 | 187 | Putative hydrolase SP0805 {Streptococcus pneumonia | 99.98 | |
| d2hcfa1 | 228 | Hypothetical protein CT1708 {Chlorobium tepidum [T | 99.97 | |
| d1x42a1 | 230 | Hypothetical protein PH0459 {Archaeon Pyrococcus h | 99.97 | |
| d2gfha1 | 247 | N-acylneuraminate-9-phosphatase NANP {Mouse (Mus m | 99.97 | |
| d1zrna_ | 220 | L-2-Haloacid dehalogenase, HAD {Pseudomonas sp., s | 99.96 | |
| d1zs9a1 | 253 | E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]} | 99.96 | |
| d1qq5a_ | 245 | L-2-Haloacid dehalogenase, HAD {Xanthobacter autot | 99.95 | |
| d2g80a1 | 225 | Protein UTR4 {Baker's yeast (Saccharomyces cerevis | 99.94 | |
| d1cr6a1 | 222 | Epoxide hydrolase, N-terminal domain {Mouse (Mus m | 99.93 | |
| d1zd3a1 | 225 | Epoxide hydrolase, N-terminal domain {Human (Homo | 99.93 | |
| d1u7pa_ | 164 | Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mu | 99.93 | |
| d2b0ca1 | 197 | Putative phosphatase YihX {Escherichia coli [TaxId | 99.93 | |
| d1nnla_ | 217 | Phosphoserine phosphatase {Human (Homo sapiens) [T | 99.86 | |
| d2fpwa1 | 161 | Histidine biosynthesis bifunctional protein HisB, | 99.85 | |
| d2feaa1 | 226 | 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate | 99.85 | |
| d2c4na1 | 250 | NagD {Escherichia coli [TaxId: 562]} | 99.85 | |
| d2gmwa1 | 182 | D,D-heptose 1,7-bisphosphate phosphatase GmhB {Esc | 99.85 | |
| d2o2xa1 | 209 | Hypothetical protein Mll2559 {Mesorhizobium loti [ | 99.85 | |
| d1wvia_ | 253 | Putative phosphatase SMU.1415c {Streptococcus muta | 99.84 | |
| d1yv9a1 | 253 | Putative hydrolase EF1188 {Enterococcus faecalis [ | 99.83 | |
| d1j97a_ | 210 | Phosphoserine phosphatase {Archaeon Methanococcus | 99.83 | |
| d1vjra_ | 261 | Hypothetical protein TM1742 {Thermotoga maritima [ | 99.78 | |
| d1ltqa1 | 149 | Polynucleotide kinase, phosphatase domain {Bacteri | 99.74 | |
| d1qyia_ | 380 | Hypothetical protein MW1667 (SA1546) {Staphylococc | 99.71 | |
| d1rkua_ | 206 | Homoserine kinase ThrH {Pseudomonas aeruginosa [Ta | 99.66 | |
| d1wr8a_ | 230 | Phosphoglycolate phosphatase, PGPase {Pyrococcus h | 99.5 | |
| d1l6ra_ | 225 | Phosphoglycolate phosphatase, PGPase {Archaeon The | 99.49 | |
| d1rkqa_ | 271 | Hypothetical protein YidA {Escherichia coli [TaxId | 99.44 | |
| d1nf2a_ | 267 | Hypothetical protein TM0651 {Thermotoga maritima [ | 99.4 | |
| d1nrwa_ | 285 | Hypothetical protein YwpJ {Bacillus subtilis [TaxI | 99.39 | |
| d1rlma_ | 269 | Sugar phosphatase SupH (YbiV) {Escherichia coli [T | 99.36 | |
| d2b82a1 | 209 | Class B acid phosphatase, AphA {Escherichia coli [ | 99.33 | |
| d2rbka1 | 260 | Sugar-phosphate phosphatase BT4131 {Bacteroides th | 99.17 | |
| d2b30a1 | 283 | PFL1270w orthologue {Plasmodium vivax [TaxId: 5855 | 99.16 | |
| d1xvia_ | 232 | Putative mannosyl-3-phosphoglycerate phosphatase M | 99.11 | |
| d2bdua1 | 291 | Cytosolic 5'-nucleotidase III {Mouse (Mus musculus | 99.11 | |
| d1wzca1 | 243 | Putative mannosyl-3-phosphoglycerate phosphatase M | 99.09 | |
| d1yj5a1 | 195 | 5' polynucleotide kinase-3' phosphatase, middle do | 98.91 | |
| d2bdea1 | 458 | Cytosolic IMP-GMP specific 5'-nucleotidase {Legion | 98.9 | |
| d1q92a_ | 195 | 5'(3')-deoxyribonucleotidase (dNT-2) {Human (Homo | 98.88 | |
| d2b8ea1 | 135 | Cation-transporting ATPase {Archaeon Archaeoglobus | 98.85 | |
| d1k1ea_ | 177 | Probable phosphatase YrbI {Haemophilus influenzae, | 98.84 | |
| d1s2oa1 | 244 | Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc | 98.83 | |
| d2amya1 | 243 | Phosphomannomutase 2 {Human (Homo sapiens) [TaxId: | 98.68 | |
| d2fuea1 | 244 | Phosphomannomutase 1 {Human (Homo sapiens) [TaxId: | 98.66 | |
| d1u02a_ | 229 | Trehalose-6-phosphate phosphatase related protein | 98.65 | |
| d1wpga2 | 168 | Calcium ATPase, catalytic domain P {Rabbit (Orycto | 98.6 | |
| d1xpja_ | 124 | Hypothetical protein VC0232 {Vibrio cholerae [TaxI | 97.79 | |
| d2obba1 | 122 | Hypothetical protein BT0820 {Bacteroides thetaiota | 97.27 | |
| d1ta0a_ | 181 | Carboxy-terminal domain RNA polymerase II polypept | 96.35 | |
| d1y8aa1 | 308 | Hypothetical protein AF1437 {Archaeon Archaeoglobu | 96.28 | |
| d1k1ea_ | 177 | Probable phosphatase YrbI {Haemophilus influenzae, | 93.86 | |
| d1qyia_ | 380 | Hypothetical protein MW1667 (SA1546) {Staphylococc | 92.56 | |
| d1xm3a_ | 251 | Thiazole biosynthesis protein ThiG {Bacillus subti | 89.71 | |
| d2pjua1 | 186 | Propionate catabolism operon regulatory protein Pr | 89.02 | |
| d1yj5a1 | 195 | 5' polynucleotide kinase-3' phosphatase, middle do | 87.13 | |
| d2c4na1 | 250 | NagD {Escherichia coli [TaxId: 562]} | 86.43 | |
| d2nn4a1 | 62 | Hypothetical protein YqgQ {Bacillus subtilis [TaxI | 85.2 | |
| d1vjra_ | 261 | Hypothetical protein TM1742 {Thermotoga maritima [ | 84.69 | |
| d1wvia_ | 253 | Putative phosphatase SMU.1415c {Streptococcus muta | 84.03 | |
| d1yv9a1 | 253 | Putative hydrolase EF1188 {Enterococcus faecalis [ | 83.53 | |
| d1ta0a_ | 181 | Carboxy-terminal domain RNA polymerase II polypept | 82.42 | |
| d1f6da_ | 376 | UDP-N-acetylglucosamine 2-epimerase {Escherichia c | 81.83 |
| >d1te2a_ c.108.1.6 (A:) Phosphatase YniC {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphatase YniC species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=4.4e-36 Score=223.57 Aligned_cols=209 Identities=22% Similarity=0.353 Sum_probs=168.1
Q ss_pred CCccEEEEecCcccccchhhHHHHHHHHHHHcCCCCCHHH-HHHhcCCChHHHHHHHHHHhCCCCCCCHHHHH-HHHHHH
Q 026543 8 KPITHVIFDMDGLLLDTEKFYTEVQELILARYNKTFDWSL-KAKMMGKKAIEAAQVFVEETGISDKLSAEDFL-VQREET 85 (237)
Q Consensus 8 ~~~~~vifD~DGTL~~~~~~~~~~~~~~~~~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 85 (237)
+++++|+||+||||+|+.+.+..++.++++++|++.+... ...+.+.................. .....+. ...+..
T Consensus 1 ~~i~a~iFD~DGTL~dt~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 79 (218)
T d1te2a_ 1 RQILAAIFDMDGLLIDSEPLWDRAELDVMASLGVDISRRNELPDTLGLRIDMVVDLWYARQPWNG-PSRQEVVERVIARA 79 (218)
T ss_dssp CCCCEEEECCBTTTBCCHHHHHHHHHHHHHHTTCCGGGGGGSCCCTTCCHHHHHHHHHHHSCCSS-SCHHHHHHHHHHHH
T ss_pred CcceEEEECCCCcccCCHHHHHHHHHHHHHHcCCCCCHHHHHHHHhCCCccchhhhhhhcccccc-hhHHHHHHHHHHHH
Confidence 4789999999999999999999999999999998766543 344556666666665555554442 3333333 333333
Q ss_pred HHhhcCCCCCCccHHHHHHHHHhCCCCEEEEeCChhhHHHHHHhhhhhhhhhcceeeeCCCCCccCCCCCHHHHHHHHHH
Q 026543 86 LQTLFPTSELMPGASHLIRHLHAKGIPMCVATGSLARHFELKTQKHRELFSLMHHVVRGDDPEVKQGKPSPDIFLAAAKR 165 (237)
Q Consensus 86 ~~~~~~~~~~~~~~~~~l~~l~~~g~~v~i~s~~~~~~~~~~~~~~~gl~~~f~~~~~~~~~~~~~~kp~~~~~~~~l~~ 165 (237)
.........++||+.++|+.|+++|++++|+||+...... ..++..|+.++|+.+++++ +.+.+||+|..|..++++
T Consensus 80 ~~~~~~~~~~~pg~~~~l~~L~~~g~~~~i~T~~~~~~~~-~~l~~~~l~~~F~~i~~~~--~~~~~Kp~~~~~~~~~~~ 156 (218)
T d1te2a_ 80 ISLVEETRPLLPGVREAVALCKEQGLLVGLASASPLHMLE-KVLTMFDLRDSFDALASAE--KLPYSKPHPQVYLDCAAK 156 (218)
T ss_dssp HHHHHHHCCBCTTHHHHHHHHHHTTCEEEEEESSCHHHHH-HHHHHTTCGGGCSEEEECT--TSSCCTTSTHHHHHHHHH
T ss_pred HHhhhccccccchHHHHHHHhhhccccccccccccccccc-ccccccccccccccccccc--ccccchhhHHHHHHHHHH
Confidence 3333344678999999999999999999999997666544 5788899999999999999 888999999999999999
Q ss_pred cCCCCCCCCcEEEEecCHHHHHHHHHcCCeEEEEcCCCCC-cccccchhhhhhhhcccC
Q 026543 166 FEGGPIDSQEILVFEDAPSGVLAAKNAGMSVVMVPDPRLD-SSYHSNADQLLSSLLGFN 223 (237)
Q Consensus 166 ~~~~~~~~~~~~~igD~~~Di~~a~~~G~~~i~v~~~~~~-~~~~~~~~~~~~~~~el~ 223 (237)
+| ++|++|++|||+.+|+.+|+++|+.+|+|..+... ......++++++++.||.
T Consensus 157 l~---~~~~~~l~igD~~~di~aA~~~G~~~i~v~~~~~~~~~~~~~a~~~i~~l~el~ 212 (218)
T d1te2a_ 157 LG---VDPLTCVALEDSVNGMIASKAARMRSIVVPAPEAQNDPRFVLANVKLSSLTELT 212 (218)
T ss_dssp HT---SCGGGEEEEESSHHHHHHHHHTTCEEEECCCTTTTTCGGGGGSSEECSCGGGCC
T ss_pred cC---CCchhcEEEeeCHHHHHHHHHcCCEEEEECCCCCccchhhcCCCEEECChhhCC
Confidence 99 99999999999999999999999999999776553 334577899999999984
|
| >d2hdoa1 c.108.1.6 (A:1-207) Phosphoglycolate phosphatase {Lactobacillus plantarum [TaxId: 1590]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphoglycolate phosphatase species: Lactobacillus plantarum [TaxId: 1590]
Probab=100.00 E-value=5.9e-36 Score=221.22 Aligned_cols=205 Identities=21% Similarity=0.307 Sum_probs=173.6
Q ss_pred CCccEEEEecCcccccchhhHHHHHHHHHHHcCCCCCHHHHHHhcCCChHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHH
Q 026543 8 KPITHVIFDMDGLLLDTEKFYTEVQELILARYNKTFDWSLKAKMMGKKAIEAAQVFVEETGISDKLSAEDFLVQREETLQ 87 (237)
Q Consensus 8 ~~~~~vifD~DGTL~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (237)
|++|+|+||+||||+|+.+.+.++|..+++++|.+...+...+..+..... .+.+.+... ...+.+...+...+.
T Consensus 1 M~~k~viFD~DGTL~ds~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~----~~~~~~~~~-~~~~~~~~~~~~~~~ 75 (207)
T d2hdoa1 1 MTYQALMFDIDGTLTNSQPAYTTVMREVLATYGKPFSPAQAQKTFPMAAEQ----AMTELGIAA-SEFDHFQAQYEDVMA 75 (207)
T ss_dssp CCCSEEEECSBTTTEECHHHHHHHHHHHHHTTTCCCCHHHHHHHTTSCHHH----HHHHTTCCG-GGHHHHHHHHHHHHT
T ss_pred CCCcEEEEeCCCCcCcCHHHHHHHHHHHHHHcCCCCCHHHHHHHhcchhhh----hhhccccch-hhHHHHHHHhhhhhc
Confidence 468999999999999999999999999999999998888887777765443 334444432 345566666677776
Q ss_pred hhcCCCCCCccHHHHHHHHHhCCCCEEEEeCChhhHHHHHHhhhhhhhhhcceeeeCCCCCccCCCCCHHHHHHHHHHcC
Q 026543 88 TLFPTSELMPGASHLIRHLHAKGIPMCVATGSLARHFELKTQKHRELFSLMHHVVRGDDPEVKQGKPSPDIFLAAAKRFE 167 (237)
Q Consensus 88 ~~~~~~~~~~~~~~~l~~l~~~g~~v~i~s~~~~~~~~~~~~~~~gl~~~f~~~~~~~~~~~~~~kp~~~~~~~~l~~~~ 167 (237)
+.....+++||+.++|+.|++ +++++|+||+...... ..++..|+..+|+.+++++ +.+..||+|..+..+++++|
T Consensus 76 ~~~~~~~~~~g~~~~L~~l~~-~~~~~ivT~~~~~~~~-~~l~~~~l~~~f~~i~~~~--~~~~~KP~p~~~~~~~~~~~ 151 (207)
T d2hdoa1 76 SHYDQIELYPGITSLFEQLPS-ELRLGIVTSQRRNELE-SGMRSYPFMMRMAVTISAD--DTPKRKPDPLPLLTALEKVN 151 (207)
T ss_dssp TCGGGCEECTTHHHHHHHSCT-TSEEEEECSSCHHHHH-HHHTTSGGGGGEEEEECGG--GSSCCTTSSHHHHHHHHHTT
T ss_pred ccccccccccchhhhhhhhcc-cccccccccccccccc-ccccccccccccccccccc--ccccchhhhhhhccccccee
Confidence 666778899999999999975 5999999997766544 6788889999999999999 88899999999999999999
Q ss_pred CCCCCCCcEEEEecCHHHHHHHHHcCCeEEEEcCCCCCcccccchhhhhhhhcccCC
Q 026543 168 GGPIDSQEILVFEDAPSGVLAAKNAGMSVVMVPDPRLDSSYHSNADQLLSSLLGFNP 224 (237)
Q Consensus 168 ~~~~~~~~~~~igD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~~~~el~~ 224 (237)
++|++|+||||+.+|+++|+++|+.+++|.+|..+......+++++.++.|+.+
T Consensus 152 ---~~~~~~l~VgDs~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~~~i~~l~dll~ 205 (207)
T d2hdoa1 152 ---VAPQNALFIGDSVSDEQTAQAANVDFGLAVWGMDPNADHQKVAHRFQKPLDILE 205 (207)
T ss_dssp ---CCGGGEEEEESSHHHHHHHHHHTCEEEEEGGGCCTTGGGSCCSEEESSGGGGGG
T ss_pred ---eeccceeEecCCHHHHHHHHHcCCeEEEEecCCCChhHhhhcCcEeCCHHHHHh
Confidence 999999999999999999999999999999887766656678888999988854
|
| >d2hsza1 c.108.1.6 (A:1-224) Phosphoglycolate phosphatase Gph {Haemophilus somnus [TaxId: 731]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphoglycolate phosphatase Gph species: Haemophilus somnus [TaxId: 731]
Probab=100.00 E-value=4.8e-34 Score=213.07 Aligned_cols=212 Identities=20% Similarity=0.235 Sum_probs=167.4
Q ss_pred CCCccEEEEecCcccccchhhHHHHHHHHHHHcCCCCC-HHHHHHhcCCChHHHHHHHHH----HhCCCCCCCHHHHHHH
Q 026543 7 KKPITHVIFDMDGLLLDTEKFYTEVQELILARYNKTFD-WSLKAKMMGKKAIEAAQVFVE----ETGISDKLSAEDFLVQ 81 (237)
Q Consensus 7 ~~~~~~vifD~DGTL~~~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~ 81 (237)
|+++|+|+||+||||+|+.+.+..++.++++++|.... .+......+............ ..... .........
T Consensus 1 M~~~k~iiFD~DGTL~Ds~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~ 78 (224)
T d2hsza1 1 MTQFKLIGFDLDGTLVNSLPDLALSINSALKDVNLPQASENLVMTWIGNGADVLSQRAVDWACKQAEKE--LTEDEFKYF 78 (224)
T ss_dssp CSSCSEEEECSBTTTEECHHHHHHHHHHHHHHTTCCCCCHHHHHHHCSSCHHHHHHHHHHHHHHHHTCC--CCHHHHHHH
T ss_pred CCCCCEEEEeCCCCcccCHHHHHHHHHHHHHHCCCCCCcHHHHHHHhhhhhhhhhhhhhhhhhhhhhhh--hhHHHHHHH
Confidence 67899999999999999999999999999999998544 455566666655544433322 22222 333332222
Q ss_pred HH----HHHHhhcCCCCCCccHHHHHHHHHhCCCCEEEEeCChhhHHHHHHhhhhhhhhhcceeeeCCCCCccCCCCCHH
Q 026543 82 RE----ETLQTLFPTSELMPGASHLIRHLHAKGIPMCVATGSLARHFELKTQKHRELFSLMHHVVRGDDPEVKQGKPSPD 157 (237)
Q Consensus 82 ~~----~~~~~~~~~~~~~~~~~~~l~~l~~~g~~v~i~s~~~~~~~~~~~~~~~gl~~~f~~~~~~~~~~~~~~kp~~~ 157 (237)
.. ...+.......++||+.++|+.|+++|++++++||+....+. ..++.+|+..+|+.+++++ +.+..||+|.
T Consensus 79 ~~~~~~~~~~~~~~~~~l~~~~~~~L~~L~~~g~~~~i~tn~~~~~~~-~~l~~~gl~~~f~~~~~~~--~~~~~kp~p~ 155 (224)
T d2hsza1 79 KRQFGFYYGENLCNISRLYPNVKETLEALKAQGYILAVVTNKPTKHVQ-PILTAFGIDHLFSEMLGGQ--SLPEIKPHPA 155 (224)
T ss_dssp HHHHHHHHHHHTTSSCEECTTHHHHHHHHHHTTCEEEEECSSCHHHHH-HHHHHTTCGGGCSEEECTT--TSSSCTTSSH
T ss_pred HHHHHHHHHHhhccccchHHHHHHHHHHHhccCCcccccccccHHHHH-HHHHhcCchhhcccccccc--ccccccccch
Confidence 11 122233456789999999999999999999999997766555 5688899999999999999 8899999999
Q ss_pred HHHHHHHHcCCCCCCCCcEEEEecCHHHHHHHHHcCCeEEEEcCCCCC--cccccchhhhhhhhcccCCCC
Q 026543 158 IFLAAAKRFEGGPIDSQEILVFEDAPSGVLAAKNAGMSVVMVPDPRLD--SSYHSNADQLLSSLLGFNPKD 226 (237)
Q Consensus 158 ~~~~~l~~~~~~~~~~~~~~~igD~~~Di~~a~~~G~~~i~v~~~~~~--~~~~~~~~~~~~~~~el~~~l 226 (237)
.+..++++++ ++|++|+||||+.+|+++|+++|+.+|+|.++... +.....++++++++.||...+
T Consensus 156 ~~~~~~~~~~---~~~~~~~~igD~~~Di~~A~~aG~~~i~v~~g~~~~~~l~~~~~d~~v~~l~dL~~ii 223 (224)
T d2hsza1 156 PFYYLCGKFG---LYPKQILFVGDSQNDIFAAHSAGCAVVGLTYGYNYNIPIAQSKPDWIFDDFADILKIT 223 (224)
T ss_dssp HHHHHHHHHT---CCGGGEEEEESSHHHHHHHHHHTCEEEEESSSCSTTCCGGGGCCSEEESSGGGGGGGT
T ss_pred hhHHHHHHhh---hhhhccchhcCcHHHHHHHHHcCCeEEEEeCCCCCcchhhhcCCCEEECCHHHHHHhh
Confidence 9999999999 99999999999999999999999999999987663 344567999999999996543
|
| >d2go7a1 c.108.1.6 (A:3-206) Hypothetical protein SP2064 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein SP2064 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=100.00 E-value=7.6e-33 Score=203.90 Aligned_cols=195 Identities=18% Similarity=0.237 Sum_probs=160.9
Q ss_pred cEEEEecCcccccchhhHHHHHHHHHHHcCCCCCHHHHHH-hcCCChHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHhh
Q 026543 11 THVIFDMDGLLLDTEKFYTEVQELILARYNKTFDWSLKAK-MMGKKAIEAAQVFVEETGISDKLSAEDFLVQREETLQTL 89 (237)
Q Consensus 11 ~~vifD~DGTL~~~~~~~~~~~~~~~~~~g~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (237)
++++||+||||+|+...+..++..+++++|.+...+.... ..+.+....+..+....+.. .+.+......+..+.
T Consensus 2 ~a~iFD~DGTL~ds~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~ 77 (204)
T d2go7a1 2 TAFIWDLDGTLLDSYEAILSGIEETFAQFSIPYDKEKVREFIFKYSVQDLLVRVAEDRNLD----VEVLNQVRAQSLAEK 77 (204)
T ss_dssp CEEEECTBTTTEECHHHHHHHHHHHHHHHTCCCCHHHHHHHHHHSCHHHHHHHHHHHHTCC----HHHHHHHHHHHHTTC
T ss_pred EEEEEcCCCcCccCHHHHHHHHHHHHHHcCCCCCHHHHHHhhcccccccccccccchhhhh----HHHHHHHHHHHHHhh
Confidence 6899999999999999999999999999999877655443 34556667777777766544 555666666666666
Q ss_pred cCCCCCCccHHHHHHHHHhCCCCEEEEeCChhhHHHHHHhhhhhhhhhcceeeeCCCCCccCCCCCHHHHHHHHHHcCCC
Q 026543 90 FPTSELMPGASHLIRHLHAKGIPMCVATGSLARHFELKTQKHRELFSLMHHVVRGDDPEVKQGKPSPDIFLAAAKRFEGG 169 (237)
Q Consensus 90 ~~~~~~~~~~~~~l~~l~~~g~~v~i~s~~~~~~~~~~~~~~~gl~~~f~~~~~~~~~~~~~~kp~~~~~~~~l~~~~~~ 169 (237)
.....++||+.++|+.|+++|++++|+||+.. ... ..++.+|+..+|+.+++++ +.+..||++..|+.++++++
T Consensus 78 ~~~~~~~pgv~~~L~~L~~~g~~~~v~Sn~~~-~~~-~~l~~~gl~~~f~~i~~s~--~~~~~Kp~~~~~~~~~~~~~-- 151 (204)
T d2go7a1 78 NAQVVLMPGAREVLAWADESGIQQFIYTHKGN-NAF-TILKDLGVESYFTEILTSQ--SGFVRKPSPEAATYLLDKYQ-- 151 (204)
T ss_dssp GGGCEECTTHHHHHHHHHHTTCEEEEECSSCT-HHH-HHHHHHTCGGGEEEEECGG--GCCCCTTSSHHHHHHHHHHT--
T ss_pred cccCcccchHHhhhhcccccccchhhhcccch-hhh-hhhhhcccccccccccccc--cccccchhHHHHHHHHHHhC--
Confidence 66788999999999999999999999999654 333 4678899999999999998 88899999999999999999
Q ss_pred CCCCCcEEEEecCHHHHHHHHHcCCeEEEEcCCCCCcccccchhhhhhhhccc
Q 026543 170 PIDSQEILVFEDAPSGVLAAKNAGMSVVMVPDPRLDSSYHSNADQLLSSLLGF 222 (237)
Q Consensus 170 ~~~~~~~~~igD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~~~~el 222 (237)
++|++|+||||+.+|+.+|+++|+.+|+|..+.. .++..++++.|+
T Consensus 152 -~~p~~~l~VgD~~~Di~~A~~~G~~~i~v~~~~~------~~~~~~~~~~dl 197 (204)
T d2go7a1 152 -LNSDNTYYIGDRTLDVEFAQNSGIQSINFLESTY------EGNHRIQALADI 197 (204)
T ss_dssp -CCGGGEEEEESSHHHHHHHHHHTCEEEESSCCSC------TTEEECSSTTHH
T ss_pred -CCCceEEEEeCCHHHHHHHHHcCCeEEEEcCCCC------CcCeecCCHHHH
Confidence 9999999999999999999999999999987643 234445555554
|
| >d1o08a_ c.108.1.6 (A:) beta-Phosphoglucomutase {Lactococcus lactis [TaxId: 1358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: beta-Phosphoglucomutase species: Lactococcus lactis [TaxId: 1358]
Probab=100.00 E-value=2.1e-32 Score=203.88 Aligned_cols=204 Identities=21% Similarity=0.292 Sum_probs=160.9
Q ss_pred CccEEEEecCcccccchhhHHHHHHHHHHHcCCCCCHHHH-HHhcCCChHHHHHHHHHHhCCCCCCCHHHHHHHH---HH
Q 026543 9 PITHVIFDMDGLLLDTEKFYTEVQELILARYNKTFDWSLK-AKMMGKKAIEAAQVFVEETGISDKLSAEDFLVQR---EE 84 (237)
Q Consensus 9 ~~~~vifD~DGTL~~~~~~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~ 84 (237)
|+|+|+||+||||+|+...+.+++.+++..+|.+.....+ ..+.+.+.....+.+....+.. .+.+.+.... ..
T Consensus 1 MikaiiFD~DGTL~ds~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~ 78 (221)
T d1o08a_ 1 MFKAVLFDLDGVITDTAEYHFRAWKALAEEIGINGVDRQFNEQLKGVSREDSLQKILDLADKK--VSAEEFKELAKRKND 78 (221)
T ss_dssp CCCEEEECCBTTTBTHHHHHHHHHHHHHHHTTCCCCCHHHHTTTTTCCHHHHHHHHHTTSSSC--CCHHHHHHHHHHHHH
T ss_pred CCcEEEEcCCCCeEcCHHHHHHHHHHHHHHcCCCCChHHHHHHHhhccchhhhhhcccccccc--chhhhhhhHHHHHHh
Confidence 5899999999999999999999999999999987665554 4455677777777777665555 5565554433 22
Q ss_pred HHHhhcC---CCCCCccHHHHHHHHHhCCCCEEEEeCChhhHHHHHHhhhhhhhhhcceeeeCCCCCccCCCCCHHHHHH
Q 026543 85 TLQTLFP---TSELMPGASHLIRHLHAKGIPMCVATGSLARHFELKTQKHRELFSLMHHVVRGDDPEVKQGKPSPDIFLA 161 (237)
Q Consensus 85 ~~~~~~~---~~~~~~~~~~~l~~l~~~g~~v~i~s~~~~~~~~~~~~~~~gl~~~f~~~~~~~~~~~~~~kp~~~~~~~ 161 (237)
.+..... ...++||+.++|+.|+++|++++++||+... ...++..|+..+|+.+++++ +.+.+||+|..|+.
T Consensus 79 ~~~~~~~~~~~~~~~~g~~~~l~~l~~~~~~i~i~s~~~~~---~~~l~~~~l~~~f~~i~~~~--~~~~~KP~~~~~~~ 153 (221)
T d1o08a_ 79 NYVKMIQDVSPADVYPGILQLLKDLRSNKIKIALASASKNG---PFLLERMNLTGYFDAIADPA--EVAASKPAPDIFIA 153 (221)
T ss_dssp HHHHHTTTCCGGGBCTTHHHHHHHHHHTTCEEEECCSCTTH---HHHHHHTTCGGGCSEECCTT--TSSSCTTSTHHHHH
T ss_pred hccccccccccccccCCceeccccccccccceEEEeecchh---hHHHHhhccccccccccccc--cccccccChHHHHH
Confidence 3333322 3568999999999999999999999996442 34677889999999999998 88899999999999
Q ss_pred HHHHcCCCCCCCCcEEEEecCHHHHHHHHHcCCeEEEEcCCCC----Ccccccchhhhhhhhccc
Q 026543 162 AAKRFEGGPIDSQEILVFEDAPSGVLAAKNAGMSVVMVPDPRL----DSSYHSNADQLLSSLLGF 222 (237)
Q Consensus 162 ~l~~~~~~~~~~~~~~~igD~~~Di~~a~~~G~~~i~v~~~~~----~~~~~~~~~~~~~~~~el 222 (237)
+++++| ++|++|+||||+.+|+++|+++|+.+|+|.++.. .......++..++++.|+
T Consensus 154 ~l~~~~---i~~~~~l~VgD~~~di~~A~~aG~~~i~v~~~~~~~~~~~~~~~~~~~~~~~l~el 215 (221)
T d1o08a_ 154 AAHAVG---VAPSESIGLEDSQAGIQAIKDSGALPIGVGRPEDLGDDIVIVPDTSHYTLEFLKEV 215 (221)
T ss_dssp HHHHTT---CCGGGEEEEESSHHHHHHHHHHTCEEEEESCHHHHCSSSEEESSGGGCCHHHHHHH
T ss_pred HHHHcC---CCCceEEEEecCHHHHHHHHHcCCEEEEECChhhcccccEEcCCcccCCHHHHHHH
Confidence 999999 9999999999999999999999999999987432 112234455556666654
|
| >d2ah5a1 c.108.1.6 (A:1-210) predicted phosphatase SP0104 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: predicted phosphatase SP0104 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=100.00 E-value=2.8e-33 Score=207.12 Aligned_cols=204 Identities=14% Similarity=0.173 Sum_probs=160.0
Q ss_pred CCCccEEEEecCcccccchhhHHHHHHHHHHHcCCCC-CHHHHHHhcCCChHHHHHHHHHHhCCCCCCCHHHHHHH-HHH
Q 026543 7 KKPITHVIFDMDGLLLDTEKFYTEVQELILARYNKTF-DWSLKAKMMGKKAIEAAQVFVEETGISDKLSAEDFLVQ-REE 84 (237)
Q Consensus 7 ~~~~~~vifD~DGTL~~~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 84 (237)
|.++|+|+||+||||+|+...+..++.++++++|.+. +.+.+..+.+............+ ......... ...
T Consensus 1 M~~ik~VifD~DGTL~ds~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~ 74 (210)
T d2ah5a1 1 MTSITAIFFDLDGTLVDSSIGIHNAFTYTFKELGVPSPDAKTIRGFMGPPLESSFATCLSK------DQISEAVQIYRSY 74 (210)
T ss_dssp CTTCCEEEECSBTTTEECHHHHHHHHHHHHHHHTCCCCCHHHHHHTSSSCHHHHHHTTSCG------GGHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCccccCHHHHHHHHHHHHHHCCCCCCCHHHHHHhhhcchhhhccccccc------hhhHHHHHHHHHH
Confidence 5679999999999999999999999999999999854 45556666666655544332211 223333333 333
Q ss_pred HHHhhcCCCCCCccHHHHHHHHHhCCCCEEEEeCChhhHHHHHHhhhhhhhhhcceeeeCCCCCccCCCCCHHHHHHHHH
Q 026543 85 TLQTLFPTSELMPGASHLIRHLHAKGIPMCVATGSLARHFELKTQKHRELFSLMHHVVRGDDPEVKQGKPSPDIFLAAAK 164 (237)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~l~~l~~~g~~v~i~s~~~~~~~~~~~~~~~gl~~~f~~~~~~~~~~~~~~kp~~~~~~~~l~ 164 (237)
..........+++++.++++.++.+ ++++++||+...... ..++.+|+..+|+.+++++ +. ++|+|..+..+++
T Consensus 75 ~~~~~~~~~~~~~~~~~~l~~l~~~-~~~~i~t~~~~~~~~-~~l~~~gl~~~fd~v~~~~--~~--~~~~p~~~~~~~~ 148 (210)
T d2ah5a1 75 YKAKGIYEAQLFPQIIDLLEELSSS-YPLYITTTKDTSTAQ-DMAKNLEIHHFFDGIYGSS--PE--APHKADVIHQALQ 148 (210)
T ss_dssp HHHTGGGSCEECTTHHHHHHHHHTT-SCEEEEEEEEHHHHH-HHHHHTTCGGGCSEEEEEC--SS--CCSHHHHHHHHHH
T ss_pred HHhhhhhcccchhHHHHHHhhhhcc-cchhhcccccchhhh-HHHHhhccccccccccccc--cc--ccccccccchhhh
Confidence 3334445678999999999999877 589999997665544 5788899999999999887 53 6888999999999
Q ss_pred HcCCCCCCCCcEEEEecCHHHHHHHHHcCCeEEEEcCCCCC--cccccchhhhhhhhcccCCC
Q 026543 165 RFEGGPIDSQEILVFEDAPSGVLAAKNAGMSVVMVPDPRLD--SSYHSNADQLLSSLLGFNPK 225 (237)
Q Consensus 165 ~~~~~~~~~~~~~~igD~~~Di~~a~~~G~~~i~v~~~~~~--~~~~~~~~~~~~~~~el~~~ 225 (237)
++| ++|+++++|||+.+|+.+|+++|+++++|.+|... +....+|+++++++.|+...
T Consensus 149 ~~~---~~~~~~v~VGDs~~Di~aa~~aGi~~i~v~~g~~~~~~l~~~~pd~vi~~l~el~~~ 208 (210)
T d2ah5a1 149 THQ---LAPEQAIIIGDTKFDMLGARETGIQKLAITWGFGEQADLLNYQPDYIAHKPLEVLAY 208 (210)
T ss_dssp HTT---CCGGGEEEEESSHHHHHHHHHHTCEEEEESSSSSCHHHHHTTCCSEEESSTTHHHHH
T ss_pred hhh---cccccceeecCCHHHHHHHHHcCCeEEEEcCCCCCHHHHHhCCCCEEECCHHHHHHH
Confidence 999 99999999999999999999999999999987653 23345799999999998654
|
| >d1swva_ c.108.1.3 (A:) Phosphonoacetaldehyde hydrolase {Bacillus cereus [TaxId: 1396]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphonoacetaldehyde hydrolase-like domain: Phosphonoacetaldehyde hydrolase species: Bacillus cereus [TaxId: 1396]
Probab=100.00 E-value=8e-33 Score=210.81 Aligned_cols=209 Identities=21% Similarity=0.213 Sum_probs=160.7
Q ss_pred CccEEEEecCcccccchhh-HHHHHHHHHHHcCCCCCHHHHHHhcCCChHHHHHHH----------HHHhCCCCCCCHHH
Q 026543 9 PITHVIFDMDGLLLDTEKF-YTEVQELILARYNKTFDWSLKAKMMGKKAIEAAQVF----------VEETGISDKLSAED 77 (237)
Q Consensus 9 ~~~~vifD~DGTL~~~~~~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~ 77 (237)
++|+|+||+||||+|+... ...++.+.++++|...+.+.+....|....+..+.+ .+.++.. .....
T Consensus 1 kIkaviFD~dGTL~d~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~ 78 (257)
T d1swva_ 1 KIEAVIFAWAGTTVDYGCFAPLEVFMEIFHKRGVAITAEEARKPMGLLKIDHVRALTEMPRIASEWNRVFRQL--PTEAD 78 (257)
T ss_dssp CCCEEEECSBTTTBSTTCCTTHHHHHHHHHTTTCCCCHHHHHTTTTSCHHHHHHHHHHSHHHHHHHHHHHSSC--CCHHH
T ss_pred CcEEEEEcCCCCeEeCcchHHHHHHHHHHHHcCCCCCHHHHHHHhCCcHHHHHHHHhhhhhhhHHHHHHhccc--CCHHH
Confidence 4799999999999998764 477889999999999888887777776554443322 2223322 22222
Q ss_pred ---HHHHHHHHHHh-hcCCCCCCccHHHHHHHHHhCCCCEEEEeCChhhHHHHHHhhhhhhhhhc-ceeeeCCCCCccCC
Q 026543 78 ---FLVQREETLQT-LFPTSELMPGASHLIRHLHAKGIPMCVATGSLARHFELKTQKHRELFSLM-HHVVRGDDPEVKQG 152 (237)
Q Consensus 78 ---~~~~~~~~~~~-~~~~~~~~~~~~~~l~~l~~~g~~v~i~s~~~~~~~~~~~~~~~gl~~~f-~~~~~~~~~~~~~~ 152 (237)
....+...+.. ......++||+.++|+.|+++|++++|+||+...... ..++..|+..+| |.+++++ +.+..
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~L~~Lk~~g~~i~i~Tn~~~~~~~-~~l~~~~l~~~f~d~~~~~d--~~~~~ 155 (257)
T d1swva_ 79 IQEMYEEFEEILFAILPRYASPINGVKEVIASLRERGIKIGSTTGYTREMMD-IVAKEAALQGYKPDFLVTPD--DVPAG 155 (257)
T ss_dssp HHHHHHHHHHHHHHHGGGGCCBCTTHHHHHHHHHHTTCEEEEBCSSCHHHHH-HHHHHHHHTTCCCSCCBCGG--GSSCC
T ss_pred HHHHHHHHHHHHHHHhhccCccCCcHHHHHHHHHhcccceeecCCCchhhHH-HHHHHHhhcccccccccccc--ccccc
Confidence 22223333333 3344689999999999999999999999997766555 567888999987 8888888 88889
Q ss_pred CCCHHHHHHHHHHcCCCCCC-CCcEEEEecCHHHHHHHHHcCCeEEEEcCCCCCc-------------------------
Q 026543 153 KPSPDIFLAAAKRFEGGPID-SQEILVFEDAPSGVLAAKNAGMSVVMVPDPRLDS------------------------- 206 (237)
Q Consensus 153 kp~~~~~~~~l~~~~~~~~~-~~~~~~igD~~~Di~~a~~~G~~~i~v~~~~~~~------------------------- 206 (237)
||+|..|..+++++| +. +++|+||||+.+|+.+|+++|+.+|+|.+|....
T Consensus 156 KP~p~~~~~~~~~l~---~~p~~~~v~VgDs~~Di~aA~~aG~~ti~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (257)
T d1swva_ 156 RPYPWMCYKNAMELG---VYPMNHMIKVGDTVSDMKEGRNAGMWTVGVILGSSELGLTEEEVENMDSVELREKIEVVRNR 232 (257)
T ss_dssp TTSSHHHHHHHHHHT---CCSGGGEEEEESSHHHHHHHHHTTSEEEEECTTCTTTCCCHHHHHHSCHHHHHHHHHHHHHH
T ss_pred ccChHHHHHHHHHhC---CCCcceEEEEeCChhhHHHHHHCCCEEEEEccCCCCCCCCHHHHhhCCHHHHHHHHHHHHHH
Confidence 999999999999999 85 5899999999999999999999999999986421
Q ss_pred ccccchhhhhhhhcccCCC
Q 026543 207 SYHSNADQLLSSLLGFNPK 225 (237)
Q Consensus 207 ~~~~~~~~~~~~~~el~~~ 225 (237)
....+||++++++.||...
T Consensus 233 l~~~gad~vi~~l~eL~~i 251 (257)
T d1swva_ 233 FVENGAHFTIETMQELESV 251 (257)
T ss_dssp HHHTTCSEEESSGGGHHHH
T ss_pred HHhCCCCEEECCHHHHHHH
Confidence 1234589999999998544
|
| >d2fdra1 c.108.1.6 (A:3-224) Hypothetical protein Atu0790 {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein Atu0790 species: Agrobacterium tumefaciens [TaxId: 358]
Probab=100.00 E-value=1.9e-32 Score=204.29 Aligned_cols=208 Identities=21% Similarity=0.305 Sum_probs=167.9
Q ss_pred ccEEEEecCcccccchhhHHHHHHHHHHHcCCCCCHHHH-HHhcCCChHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHh
Q 026543 10 ITHVIFDMDGLLLDTEKFYTEVQELILARYNKTFDWSLK-AKMMGKKAIEAAQVFVEETGISDKLSAEDFLVQREETLQT 88 (237)
Q Consensus 10 ~~~vifD~DGTL~~~~~~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (237)
+|+|+||+||||+|+...+.+++.++++++|.+.+.+.+ ..+.+.+.....+.+..+.+.. ...+.+......+...
T Consensus 2 ~kaviFD~DGtL~dt~~~~~~a~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~ 79 (222)
T d2fdra1 2 FDLIIFDCDGVLVDSEIIAAQVESRLLTEAGYPISVEEMGERFAGMTWKNILLQVESEASIP--LSASLLDKSEKLLDMR 79 (222)
T ss_dssp CSEEEECSBTTTBCCHHHHHHHHHHHHHHTTCCCCHHHHHHHHTTCCHHHHHHHHHHHHCCC--CCTHHHHHHHHHHHHH
T ss_pred ceEEEECCCCcccCCHHHHHHHHHHHHHHcCCCCCHHHHHHHHhhhcccccccccccccccc--ccccchhHHHHHHHHH
Confidence 799999999999999999999999999999998887665 5567888888899999998877 5555555444444444
Q ss_pred hcCCCCCCccHHHHHHHHHhCCCCEEEEeCChhhHHHHHHhhhhhhhhhcceeeeC-CCCCccCCCCCHHHHHHHHHHcC
Q 026543 89 LFPTSELMPGASHLIRHLHAKGIPMCVATGSLARHFELKTQKHRELFSLMHHVVRG-DDPEVKQGKPSPDIFLAAAKRFE 167 (237)
Q Consensus 89 ~~~~~~~~~~~~~~l~~l~~~g~~v~i~s~~~~~~~~~~~~~~~gl~~~f~~~~~~-~~~~~~~~kp~~~~~~~~l~~~~ 167 (237)
......++||+.++++.++ .+.+++|++...... ..++..++..+|+.++.+ ++......||++..|..+++++|
T Consensus 80 ~~~~~~~~~g~~~~L~~l~---~~~~i~t~~~~~~~~-~~l~~~~l~~~f~~~~~~~~~~~~~~~KP~~~~~~~~~~~l~ 155 (222)
T d2fdra1 80 LERDVKIIDGVKFALSRLT---TPRCICSNSSSHRLD-MMLTKVGLKPYFAPHIYSAKDLGADRVKPKPDIFLHGAAQFG 155 (222)
T ss_dssp HHHHCCBCTTHHHHHHHCC---SCEEEEESSCHHHHH-HHHHHTTCGGGTTTCEEEHHHHCTTCCTTSSHHHHHHHHHHT
T ss_pred hhhccchhhhHHHHhhhcc---ccceeeeecchhhhh-hhhcccccccccceeecccccccccccccCHHHHHHHHHhhC
Confidence 4456889999999998886 456789986665544 568888999999976544 31124578999999999999999
Q ss_pred CCCCCCCcEEEEecCHHHHHHHHHcCCeEEEEcCCCCCc------ccccchhhhhhhhcccCCCC
Q 026543 168 GGPIDSQEILVFEDAPSGVLAAKNAGMSVVMVPDPRLDS------SYHSNADQLLSSLLGFNPKD 226 (237)
Q Consensus 168 ~~~~~~~~~~~igD~~~Di~~a~~~G~~~i~v~~~~~~~------~~~~~~~~~~~~~~el~~~l 226 (237)
++|++|+||||+..|+.+|+++|+.+|+|..+.... ....+|+++++|+.||...+
T Consensus 156 ---~~p~~~l~vgDs~~dv~aA~~aG~~~i~v~~~~~~~~~~~~~l~~~~ad~vi~~l~eL~~ll 217 (222)
T d2fdra1 156 ---VSPDRVVVVEDSVHGIHGARAAGMRVIGFTGASHTYPSHADRLTDAGAETVISRMQDLPAVI 217 (222)
T ss_dssp ---CCGGGEEEEESSHHHHHHHHHTTCEEEEECCSTTCCTTHHHHHHHHTCSEEESCGGGHHHHH
T ss_pred ---CCCceEEEEcCCHHHHHHHHHcCCEEEEEccCCCCCcchHHHHHhCCCCEEECCHHHHHHHH
Confidence 999999999999999999999999999999876532 12346899999999986554
|
| >d2fi1a1 c.108.1.3 (A:4-190) Putative hydrolase SP0805 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphonoacetaldehyde hydrolase-like domain: Putative hydrolase SP0805 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=99.98 E-value=2.1e-31 Score=193.52 Aligned_cols=178 Identities=21% Similarity=0.237 Sum_probs=145.3
Q ss_pred CCccEEEEecCcccccchhhHHHHHHHHHHHcCCCCCHHHHHHhcCCChHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHH
Q 026543 8 KPITHVIFDMDGLLLDTEKFYTEVQELILARYNKTFDWSLKAKMMGKKAIEAAQVFVEETGISDKLSAEDFLVQREETLQ 87 (237)
Q Consensus 8 ~~~~~vifD~DGTL~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (237)
|++|+|+||+||||+|+...+..++.++++.+|+....+......+......+ +.+... .+.+.+.+.....
T Consensus 1 M~~k~viFD~DGTL~dt~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~----~~~~~~----~~~~~~~~~~~~~ 72 (187)
T d2fi1a1 1 MKYHDYIWDLGGTLLDNYETSTAAFVETLALYGITQDHDSVYQALKVSTPFAI----ETFAPN----LENFLEKYKENEA 72 (187)
T ss_dssp CCCSEEEECTBTTTBCHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHCHHHHH----HHHCTT----CTTHHHHHHHHHH
T ss_pred CCCCEEEEeCCCCcccCHHHHHHHHHHHHHHcCCCccHHHHHhhhhccchhhh----hhhhHH----HHHHHHHHHHHHH
Confidence 56899999999999999999999999999999998887777666655444333 333222 1233444444455
Q ss_pred hhcCCCCCCccHHHHHHHHHhCCCCEEEEeCChhhHHHHHHhhhhhhhhhcceeeeCCCCCccCCCCCHHHHHHHHHHcC
Q 026543 88 TLFPTSELMPGASHLIRHLHAKGIPMCVATGSLARHFELKTQKHRELFSLMHHVVRGDDPEVKQGKPSPDIFLAAAKRFE 167 (237)
Q Consensus 88 ~~~~~~~~~~~~~~~l~~l~~~g~~v~i~s~~~~~~~~~~~~~~~gl~~~f~~~~~~~~~~~~~~kp~~~~~~~~l~~~~ 167 (237)
.......++||+.++|+.|+++|++++|+||+... ... .++..++..+|+.+++++ +....||+|..|..++++++
T Consensus 73 ~~~~~~~~~~gv~~~l~~l~~~g~~~~i~Sn~~~~-~~~-~l~~~~l~~~fd~i~~~~--~~~~~KP~p~~~~~~~~~~~ 148 (187)
T d2fi1a1 73 RELEHPILFEGVSDLLEDISNQGGRHFLVSHRNDQ-VLE-ILEKTSIAAYFTEVVTSS--SGFKRKPNPESMLYLREKYQ 148 (187)
T ss_dssp HHTTSCCBCTTHHHHHHHHHHTTCEEEEECSSCTH-HHH-HHHHTTCGGGEEEEECGG--GCCCCTTSCHHHHHHHHHTT
T ss_pred HHhhcCcccchhHHHHHHHHhhhccccccccCccc-hhh-hhhhhccccccccccccc--cccccCCCHHHHHHHHHHcC
Confidence 55567889999999999999999999999996553 443 577889999999999998 88899999999999999999
Q ss_pred CCCCCCCcEEEEecCHHHHHHHHHcCCeEEEEcCC
Q 026543 168 GGPIDSQEILVFEDAPSGVLAAKNAGMSVVMVPDP 202 (237)
Q Consensus 168 ~~~~~~~~~~~igD~~~Di~~a~~~G~~~i~v~~~ 202 (237)
++ +|+||||+..|+++|+++|+++++|+.+
T Consensus 149 ---~~--~~l~vgDs~~Di~aA~~aG~~~i~v~~~ 178 (187)
T d2fi1a1 149 ---IS--SGLVIGDRPIDIEAGQAAGLDTHLFTSI 178 (187)
T ss_dssp ---CS--SEEEEESSHHHHHHHHHTTCEEEECSCH
T ss_pred ---CC--CeEEEeCCHHHHHHHHHcCCEEEEECCC
Confidence 64 5999999999999999999999999764
|
| >d2hcfa1 c.108.1.6 (A:2-229) Hypothetical protein CT1708 {Chlorobium tepidum [TaxId: 1097]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein CT1708 species: Chlorobium tepidum [TaxId: 1097]
Probab=99.97 E-value=2.2e-32 Score=204.76 Aligned_cols=210 Identities=17% Similarity=0.203 Sum_probs=154.2
Q ss_pred ccEEEEecCcccccchhhHHHHHHHHHHHc-CCCCCHHHHHHhcCCChHHHHHHHHHHhCCCCCCCHHHHHHHHHH---H
Q 026543 10 ITHVIFDMDGLLLDTEKFYTEVQELILARY-NKTFDWSLKAKMMGKKAIEAAQVFVEETGISDKLSAEDFLVQREE---T 85 (237)
Q Consensus 10 ~~~vifD~DGTL~~~~~~~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~ 85 (237)
.|+|+||+||||+++...+..++..++.+. +....... ..+.+.........++...+.......+.+....+. .
T Consensus 2 ~klviFD~DGTL~d~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (228)
T d2hcfa1 2 RTLVLFDIDGTLLKVESMNRRVLADALIEVYGTEGSTGS-HDFSGKMDGAIIYEVLSNVGLERAEIADKFDKAKETYIAL 80 (228)
T ss_dssp CEEEEECCBTTTEEECTHHHHHHHHHHHHHHSCCCCC----CCTTCCHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHH
T ss_pred ceEEEEeCCCCcccCHHHHHHHHHHHHHHHcCCCccHHH-HHHhcCchHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHH
Confidence 489999999999999999999998877664 44332222 223344555555666666554411111222222222 2
Q ss_pred HHhhc--CCCCCCccHHHHHHHHHhCC-CCEEEEeCChhhHHHHHHhhhhhhhhhcceeeeCCCCCccCCCCCHHHHHHH
Q 026543 86 LQTLF--PTSELMPGASHLIRHLHAKG-IPMCVATGSLARHFELKTQKHRELFSLMHHVVRGDDPEVKQGKPSPDIFLAA 162 (237)
Q Consensus 86 ~~~~~--~~~~~~~~~~~~l~~l~~~g-~~v~i~s~~~~~~~~~~~~~~~gl~~~f~~~~~~~~~~~~~~kp~~~~~~~~ 162 (237)
+.+.. ....++||+.++|+.|+++| ++++|+||+...... ..++..|+..+|+.+++++ +....||+|..+...
T Consensus 81 ~~~~~~~~~~~~~~g~~~~L~~L~~~g~~~~~v~t~~~~~~~~-~~l~~~gl~~~fd~i~~~~--~~~~~k~~p~~~~~~ 157 (228)
T d2hcfa1 81 FRERARREDITLLEGVRELLDALSSRSDVLLGLLTGNFEASGR-HKLKLPGIDHYFPFGAFAD--DALDRNELPHIALER 157 (228)
T ss_dssp HHHHCCGGGEEECTTHHHHHHHHHTCTTEEEEEECSSCHHHHH-HHHHTTTCSTTCSCEECTT--TCSSGGGHHHHHHHH
T ss_pred HHHHhhccCceecCchHHHHhhhhccccccccccCCCcchhhh-hhhhhhccccccccccccc--ccccccchhHHHHHH
Confidence 22222 23578999999999999987 899999997666555 5688899999999999998 777888998887776
Q ss_pred HHHc---CCCCCCCCcEEEEecCHHHHHHHHHcCCeEEEEcCCCCCcc--cccchhhhhhhhcccCCCC
Q 026543 163 AKRF---EGGPIDSQEILVFEDAPSGVLAAKNAGMSVVMVPDPRLDSS--YHSNADQLLSSLLGFNPKD 226 (237)
Q Consensus 163 l~~~---~~~~~~~~~~~~igD~~~Di~~a~~~G~~~i~v~~~~~~~~--~~~~~~~~~~~~~el~~~l 226 (237)
++++ + ++|++|+||||+.+|+.+|+++|+.+|+|.+|..... ...+|++++++++|+...+
T Consensus 158 ~~~~~~~~---~~p~~~l~VGD~~~Di~aA~~aG~~~i~v~~g~~~~~~l~~~~ad~vi~~~~el~~~l 223 (228)
T d2hcfa1 158 ARRMTGAN---YSPSQIVIIGDTEHDIRCARELDARSIAVATGNFTMEELARHKPGTLFKNFAETDEVL 223 (228)
T ss_dssp HHHHHCCC---CCGGGEEEEESSHHHHHHHHTTTCEEEEECCSSSCHHHHHTTCCSEEESCSCCHHHHH
T ss_pred hhhhcccC---CChhHheeecCChHHHHHHHHcCCEEEEEcCCCCCHHHHhhCCCCEEECCHHHHHHHH
Confidence 6666 6 8999999999999999999999999999998877433 4457999999999986544
|
| >d1x42a1 c.108.1.1 (A:1-230) Hypothetical protein PH0459 {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: HAD-related domain: Hypothetical protein PH0459 species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=99.97 E-value=1.6e-30 Score=194.82 Aligned_cols=205 Identities=19% Similarity=0.230 Sum_probs=148.3
Q ss_pred CccEEEEecCcccccchhhHHHHHHHHHHHcCC-CCCHHHHH------------HhcC---CChH----HHHHHHHHHhC
Q 026543 9 PITHVIFDMDGLLLDTEKFYTEVQELILARYNK-TFDWSLKA------------KMMG---KKAI----EAAQVFVEETG 68 (237)
Q Consensus 9 ~~~~vifD~DGTL~~~~~~~~~~~~~~~~~~g~-~~~~~~~~------------~~~~---~~~~----~~~~~~~~~~~ 68 (237)
|+|+|+||+||||+++..........+.+.++. ........ ...+ .... ...+.+..+.+
T Consensus 1 MiK~I~FD~dGTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (230)
T d1x42a1 1 MIRAVFFDFVGTLLSVEGEAKTHLKIMEEVLGDYPLNPKTLLDEYEKLTREAFSNYAGKPYRPIRDIEEEVMRKLAEKYG 80 (230)
T ss_dssp CCCEEEECSBTTTBCHHHHHHHHHHHHHHHHTTCSSCHHHHHHHHHHHHHHHHHHHTTSBCCCHHHHHHHHHHHHHHHHC
T ss_pred CCeEEEEeCCCCcEechhhHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHHHhh
Confidence 579999999999999887665555555454432 22222111 1111 1111 22233444444
Q ss_pred CCCCCCHHHHHHHHHHHHHhhcCCCCCCccHHHHHHHHHhCCCCEEEEeCChhhHHHHHHhhhhhhhhhcceeeeCCCCC
Q 026543 69 ISDKLSAEDFLVQREETLQTLFPTSELMPGASHLIRHLHAKGIPMCVATGSLARHFELKTQKHRELFSLMHHVVRGDDPE 148 (237)
Q Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~v~i~s~~~~~~~~~~~~~~~gl~~~f~~~~~~~~~~ 148 (237)
.. ... ...+....... ....++||+.++|+.|++ +++++++||+...... ..++..|+.++|+.+++++ +
T Consensus 81 ~~--~~~-~~~~~~~~~~~---~~~~~~p~~~~~L~~l~~-~~~i~i~Sn~~~~~~~-~~l~~~gl~~~fd~i~~s~--~ 150 (230)
T d1x42a1 81 FK--YPE-NFWEIHLRMHQ---RYGELYPEVVEVLKSLKG-KYHVGMITDSDTEYLM-AHLDALGIKDLFDSITTSE--E 150 (230)
T ss_dssp CC--CCT-THHHHHHHHHH---HHCCBCTTHHHHHHHHBT-TBEEEEEESSCHHHHH-HHHHHHTCGGGCSEEEEHH--H
T ss_pred hc--hHH-HHHHHHHHHHH---hhCcccccHHHHHHHhhc-cCceeeeeccccccch-hhhcccccccccccccccc--c
Confidence 43 111 11122222221 236789999999999974 6999999998776555 5678889999999999998 8
Q ss_pred ccCCCCCHHHHHHHHHHcCCCCCCCCcEEEEecCH-HHHHHHHHcCCeEEEEcCCCCCcccccchhhhhhhhcccCCCC
Q 026543 149 VKQGKPSPDIFLAAAKRFEGGPIDSQEILVFEDAP-SGVLAAKNAGMSVVMVPDPRLDSSYHSNADQLLSSLLGFNPKD 226 (237)
Q Consensus 149 ~~~~kp~~~~~~~~l~~~~~~~~~~~~~~~igD~~-~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~~~~el~~~l 226 (237)
.+..||+++.|..+++++| ++|++|++|||+. +|+.+|+++|++++++.++.........++++++|++|+...+
T Consensus 151 ~~~~KP~~~~~~~~~~~l~---~~p~~~l~vgD~~~~Di~~A~~~G~~~v~v~~~~~~~~~~~~~d~~i~~l~el~~~l 226 (230)
T d1x42a1 151 AGFFKPHPRIFELALKKAG---VKGEEAVYVGDNPVKDCGGSKNLGMTSILLDRKGEKREFWDKCDFIVSDLREVIKIV 226 (230)
T ss_dssp HTBCTTSHHHHHHHHHHHT---CCGGGEEEEESCTTTTHHHHHTTTCEEEEECTTSCCGGGGGGSSEEESSTTHHHHHH
T ss_pred ccccchhhHHHHHHHhhhc---ccccccceeecCcHhHHHHHHHcCCEEEEECCCCCCcccccCCCEEECCHHHHHHHH
Confidence 8899999999999999999 9999999999996 8999999999999999887666666778999999999985544
|
| >d2gfha1 c.108.1.6 (A:1-247) N-acylneuraminate-9-phosphatase NANP {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: N-acylneuraminate-9-phosphatase NANP species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.97 E-value=1.7e-29 Score=191.11 Aligned_cols=212 Identities=15% Similarity=0.130 Sum_probs=148.0
Q ss_pred CCCccEEEEecCcccccchhhHHHHHHHHHHHcCCCCC----HHHHH-----Hhc-------CCChHH----HHHHHHHH
Q 026543 7 KKPITHVIFDMDGLLLDTEKFYTEVQELILARYNKTFD----WSLKA-----KMM-------GKKAIE----AAQVFVEE 66 (237)
Q Consensus 7 ~~~~~~vifD~DGTL~~~~~~~~~~~~~~~~~~g~~~~----~~~~~-----~~~-------~~~~~~----~~~~~~~~ 66 (237)
|.++|+|+||+||||+++.......+.++++.++.... ..... ... ...... .+......
T Consensus 3 m~~IKaviFD~dGTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (247)
T d2gfha1 3 LSRVRAVFFDLDNTLIDTAGASRRGMLEVIKLLQSKYHYKEEAEIICDKVQVKLSKECFHPYSTCITDVRTSHWEEAIQE 82 (247)
T ss_dssp CCCCCEEEECCBTTTBCHHHHHHHHHHHHHHHHHHTTCCCTHHHHHHHHHHHHHHTCCCC----CHHHHHHHHHHHHHHH
T ss_pred CCCCcEEEEcCCCCcCcChHHHHHHHHHHHHHhccccCcHHHHHHHHHHHHHHHhhhhhhhhhhhhhHHHHHHHHHHHHH
Confidence 67899999999999999888877777777665532211 11110 000 011111 11222222
Q ss_pred hCCCCCCCHHHHHHHHHHHHHhhcCCCCCCccHHHHHHHHHhCCCCEEEEeCChhhHHHHHHhhhhhhhhhcceeeeCCC
Q 026543 67 TGISDKLSAEDFLVQREETLQTLFPTSELMPGASHLIRHLHAKGIPMCVATGSLARHFELKTQKHRELFSLMHHVVRGDD 146 (237)
Q Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~v~i~s~~~~~~~~~~~~~~~gl~~~f~~~~~~~~ 146 (237)
.+... ............+.........++||+.++|+.|++ +++++++||+...... ..++..|+..+|+.+++++
T Consensus 83 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~~-~~~l~i~Tn~~~~~~~-~~l~~~gl~~~fd~i~~s~- 158 (247)
T d2gfha1 83 TKGGA-DNRKLAEECYFLWKSTRLQHMILADDVKAMLTELRK-EVRLLLLTNGDRQTQR-EKIEACACQSYFDAIVIGG- 158 (247)
T ss_dssp HHCSS-CCHHHHHHHHHHHHHHHHHTCCCCHHHHHHHHHHHT-TSEEEEEECSCHHHHH-HHHHHHTCGGGCSEEEEGG-
T ss_pred hcccc-chHHHHHHHHHHHHHhhhccCccCccHHHHHHHhhc-ccceEEeecccchhhh-hhhhhcccccccccccccc-
Confidence 22220 222222333333333334457899999999999985 6899999997766544 5677889999999999999
Q ss_pred CCccCCCCCHHHHHHHHHHcCCCCCCCCcEEEEecCH-HHHHHHHHcCCeEEEEcCCCC--CcccccchhhhhhhhcccC
Q 026543 147 PEVKQGKPSPDIFLAAAKRFEGGPIDSQEILVFEDAP-SGVLAAKNAGMSVVMVPDPRL--DSSYHSNADQLLSSLLGFN 223 (237)
Q Consensus 147 ~~~~~~kp~~~~~~~~l~~~~~~~~~~~~~~~igD~~-~Di~~a~~~G~~~i~v~~~~~--~~~~~~~~~~~~~~~~el~ 223 (237)
+.+..||+|.+|..+++++| ++|++|+||||+. +|+.+|+++|++++++..+.. .......|++++.++.||.
T Consensus 159 -~~~~~KP~p~~~~~~~~~~~---~~~~~~l~iGD~~~~Di~~A~~~G~~~~~~~~~~~~~~~~~~~~p~~~i~~l~eL~ 234 (247)
T d2gfha1 159 -EQKEEKPAPSIFYHCCDLLG---VQPGDCVMVGDTLETDIQGGLNAGLKATVWINKSGRVPLTSSPMPHYMVSSVLELP 234 (247)
T ss_dssp -GSSSCTTCHHHHHHHHHHHT---CCGGGEEEEESCTTTHHHHHHHTTCSEEEEECTTCCCCSSCCCCCSEEESSGGGHH
T ss_pred -ccccchhhhhhHHHHHHHhh---cCHHhcceeccChHhHHHHHHHcCCeEEEEECCCCCCcccccCCCCEEECCHHHHH
Confidence 88899999999999999999 9999999999997 899999999998655433333 3334567899999999986
Q ss_pred CCC
Q 026543 224 PKD 226 (237)
Q Consensus 224 ~~l 226 (237)
..+
T Consensus 235 ~ll 237 (247)
T d2gfha1 235 ALL 237 (247)
T ss_dssp HHH
T ss_pred HHH
Confidence 554
|
| >d1zrna_ c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Pseudomonas sp., strain YL [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: HAD-related domain: L-2-Haloacid dehalogenase, HAD species: Pseudomonas sp., strain YL [TaxId: 306]
Probab=99.96 E-value=3.8e-28 Score=180.42 Aligned_cols=128 Identities=15% Similarity=0.201 Sum_probs=112.7
Q ss_pred CCCCCCccHHHHHHHHHhCCCCEEEEeCChhhHHHHHHhhhhhhhhhcceeeeCCCCCccCCCCCHHHHHHHHHHcCCCC
Q 026543 91 PTSELMPGASHLIRHLHAKGIPMCVATGSLARHFELKTQKHRELFSLMHHVVRGDDPEVKQGKPSPDIFLAAAKRFEGGP 170 (237)
Q Consensus 91 ~~~~~~~~~~~~l~~l~~~g~~v~i~s~~~~~~~~~~~~~~~gl~~~f~~~~~~~~~~~~~~kp~~~~~~~~l~~~~~~~ 170 (237)
....+++++.++++.+++.+++++++||+...... ..++..++..+||.+++++ +.+..||+|..|..+++++|
T Consensus 90 ~~~~~~~~~~~~l~~l~~~~~~~~i~tn~~~~~~~-~~~~~~~~~~~fd~~~~s~--~~~~~KP~p~~~~~~~~~~g--- 163 (220)
T d1zrna_ 90 LRLAPFSEVPDSLRELKRRGLKLAILSNGSPQSID-AVVSHAGLRDGFDHLLSVD--PVQVYKPDNRVYELAEQALG--- 163 (220)
T ss_dssp GGCEECTTHHHHHHHHHHTTCEEEEEESSCHHHHH-HHHHHTTCGGGCSEEEESG--GGTCCTTSHHHHHHHHHHHT---
T ss_pred ccccccchhHHHHHHHHhcCCeEEeecchHHHHHH-HHHhhccccccccceeeee--eeeccccHHHHHHHHHHHhC---
Confidence 34678999999999999999999999997766554 5677889999999999999 89999999999999999999
Q ss_pred CCCCcEEEEecCHHHHHHHHHcCCeEEEEcCCCC-CcccccchhhhhhhhcccCC
Q 026543 171 IDSQEILVFEDAPSGVLAAKNAGMSVVMVPDPRL-DSSYHSNADQLLSSLLGFNP 224 (237)
Q Consensus 171 ~~~~~~~~igD~~~Di~~a~~~G~~~i~v~~~~~-~~~~~~~~~~~~~~~~el~~ 224 (237)
++|++|+||||+..|+.+|+++|+++++|.++.. .......|+++++++.||..
T Consensus 164 ~~p~e~l~VgD~~~Di~~A~~aG~~~v~v~r~~~~~~~~~~~~d~~i~~l~el~~ 218 (220)
T d1zrna_ 164 LDRSAILFVASNAWDATGARYFGFPTCWINRTGNVFEEMGQTPDWEVTSLRAVVE 218 (220)
T ss_dssp SCGGGEEEEESCHHHHHHHHHHTCCEEEECTTCCCCCSSSCCCSEEESSHHHHHT
T ss_pred CCCceEEEEecChHhHHHHHHcCCEEEEEcCCCCCcccccCCCCEEECCHHHHHh
Confidence 9999999999999999999999999999986555 33345668999999999843
|
| >d1zs9a1 c.108.1.22 (A:4-256) E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Enolase-phosphatase E1 domain: E-1 enzyme species: Human(Homo sapiens) [TaxId: 9606]
Probab=99.96 E-value=4.2e-28 Score=183.28 Aligned_cols=135 Identities=14% Similarity=0.137 Sum_probs=110.6
Q ss_pred HHHHHHhhcCCCCCCccHHHHHHHHHhCCCCEEEEeCChhhHHHHHHhhhhhhhhhcceeeeC-CCCCccCCCCCHHHHH
Q 026543 82 REETLQTLFPTSELMPGASHLIRHLHAKGIPMCVATGSLARHFELKTQKHRELFSLMHHVVRG-DDPEVKQGKPSPDIFL 160 (237)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~v~i~s~~~~~~~~~~~~~~~gl~~~f~~~~~~-~~~~~~~~kp~~~~~~ 160 (237)
+...+........++||+.++++.|+++|++++|+||+...... ..++..|+..+|+..... + .....||+|.+|.
T Consensus 115 ~~~~~~~~~~~~~~~pg~~e~l~~L~~~g~~l~i~Tn~~~~~~~-~~~~~~~~~~~~~~~~~~~d--~~~~~KP~p~~~~ 191 (253)
T d1zs9a1 115 WRAAFTAGRMKAEFFADVVPAVRKWREAGMKVYIYSSGSVEAQK-LLFGHSTEGDILELVDGHFD--TKIGHKVESESYR 191 (253)
T ss_dssp HHHHHHTTSCCBCCCTTHHHHHHHHHHTTCEEEEECSSCHHHHH-HHHHTBTTBCCGGGCSEEEC--GGGCCTTCHHHHH
T ss_pred HHHHHHhhhcccccCCCHHHHHHHHhhccCceeecCCCcHHHHH-HHHHHcCcchhhhhcceeec--cccccCCCcHHHH
Confidence 33444455556789999999999999999999999997766544 567778888888765543 4 4567899999999
Q ss_pred HHHHHcCCCCCCCCcEEEEecCHHHHHHHHHcCCeEEEEcCCCCCc--ccccchhhhhhhhccc
Q 026543 161 AAAKRFEGGPIDSQEILVFEDAPSGVLAAKNAGMSVVMVPDPRLDS--SYHSNADQLLSSLLGF 222 (237)
Q Consensus 161 ~~l~~~~~~~~~~~~~~~igD~~~Di~~a~~~G~~~i~v~~~~~~~--~~~~~~~~~~~~~~el 222 (237)
.+++++| ++|++|+||||+.+|+.+|+++||++++|.++.... .....++.+++||.||
T Consensus 192 ~~~~~~~---~~p~~~l~vgD~~~dv~aA~~aG~~ti~v~r~g~~~~~~~~~~~~~~i~sl~EL 252 (253)
T d1zs9a1 192 KIADSIG---CSTNNILFLTDVTREASAAEEADVHVAVVVRPGNAGLTDDEKTYYSLITSFSEL 252 (253)
T ss_dssp HHHHHHT---SCGGGEEEEESCHHHHHHHHHTTCEEEEECCTTCCCCCHHHHHHSCEESSGGGC
T ss_pred HHHHHhC---CCcCcEEEEeCCHHHHHHHHHcCCEEEEEeCCCCCCCchhhcCCCcEECChHHh
Confidence 9999999 999999999999999999999999999998654432 2345677889999987
|
| >d1qq5a_ c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Xanthobacter autotrophicus [TaxId: 280]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: HAD-related domain: L-2-Haloacid dehalogenase, HAD species: Xanthobacter autotrophicus [TaxId: 280]
Probab=99.95 E-value=1.9e-27 Score=179.32 Aligned_cols=128 Identities=18% Similarity=0.235 Sum_probs=107.7
Q ss_pred cCCCCCCccHHHHHHHHHhCCCCEEEEeCChhhHHHHHHhhhhhhhhhcceeeeCCCCCccCCCCCHHHHHHHHHHcCCC
Q 026543 90 FPTSELMPGASHLIRHLHAKGIPMCVATGSLARHFELKTQKHRELFSLMHHVVRGDDPEVKQGKPSPDIFLAAAKRFEGG 169 (237)
Q Consensus 90 ~~~~~~~~~~~~~l~~l~~~g~~v~i~s~~~~~~~~~~~~~~~gl~~~f~~~~~~~~~~~~~~kp~~~~~~~~l~~~~~~ 169 (237)
.....+++++.+.|+.|+ ++.++++||+...... ..++..++..+||.+++++ +.+..||+|++|..+++++|
T Consensus 89 ~~~~~~~~~~~~~L~~l~--~~~~~v~s~~~~~~~~-~~~~~~~~~~~fd~v~~s~--~~~~~KP~p~~f~~a~~~lg-- 161 (245)
T d1qq5a_ 89 YNRLTPYPDAAQCLAELA--PLKRAILSNGAPDMLQ-ALVANAGLTDSFDAVISVD--AKRVFKPHPDSYALVEEVLG-- 161 (245)
T ss_dssp GGSCCBCTTHHHHHHHHT--TSEEEEEESSCHHHHH-HHHHHTTCGGGCSEEEEGG--GGTCCTTSHHHHHHHHHHHC--
T ss_pred ccccccchhhhHHHHHHh--hhceeEEeccchHHHH-HHHhhcccccccccccccc--cccccCccHHHHHHHHHHhC--
Confidence 345789999999999886 5788999997776555 4677789999999999999 89999999999999999999
Q ss_pred CCCCCcEEEEecCHHHHHHHHHcCCeEEEEcCCCC------------------------CcccccchhhhhhhhcccCCC
Q 026543 170 PIDSQEILVFEDAPSGVLAAKNAGMSVVMVPDPRL------------------------DSSYHSNADQLLSSLLGFNPK 225 (237)
Q Consensus 170 ~~~~~~~~~igD~~~Di~~a~~~G~~~i~v~~~~~------------------------~~~~~~~~~~~~~~~~el~~~ 225 (237)
++|++|+||||+.+|+.+|+++||++|+|..+.. .......||++++++.||...
T Consensus 162 -~~p~e~l~VgD~~~di~~A~~aG~~tv~v~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pd~~i~~l~el~~l 240 (245)
T d1qq5a_ 162 -VTPAEVLFVSSNGFDVGGAKNFGFSVARVARLSQEALARELVSGTIAPLTMFKALRMREETYAEAPDFVVPALGDLPRL 240 (245)
T ss_dssp -CCGGGEEEEESCHHHHHHHHHHTCEEEEECCSCHHHHHHHTTSSSCCHHHHHHHHHSSCCTTSCCCSEEESSGGGHHHH
T ss_pred -CChhhEEEEeCCHHHHHHHHHcCCeEEEEcCCCcccccccccccccccchhhhhhhhhhhhccCCCCEEECCHHHHHHH
Confidence 9999999999999999999999999999976432 122244688888888887543
|
| >d2g80a1 c.108.1.22 (A:17-241) Protein UTR4 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Enolase-phosphatase E1 domain: Protein UTR4 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.94 E-value=6.4e-26 Score=168.55 Aligned_cols=202 Identities=10% Similarity=0.096 Sum_probs=129.8
Q ss_pred CccEEEEecCcccccchh---h----HHHHHHHHHHHcCCCCCHHHH-HHhcCCChHHHHHHHHHHhCCCCCCCHHHHHH
Q 026543 9 PITHVIFDMDGLLLDTEK---F----YTEVQELILARYNKTFDWSLK-AKMMGKKAIEAAQVFVEETGISDKLSAEDFLV 80 (237)
Q Consensus 9 ~~~~vifD~DGTL~~~~~---~----~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (237)
++++|+||+||||+|+.. . +.+.+.+++.+.+.....+.. ..............+....... ........
T Consensus 2 ~~~~~lfD~dGTl~d~~~v~d~lfp~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~ 79 (225)
T d2g80a1 2 NYSTYLLDIEGTVCPISFVKETLFPYFTNKVPQLVQQDTRDSPVSNILSQFHIDNKEQLQAHILELVAKD--VKDPILKQ 79 (225)
T ss_dssp CCSEEEECCBTTTBCTHHHHHTHHHHHHHHHHHHHHSCCTTSHHHHHHHTTCCCCHHHHHHHHHHHHHTT--CCCHHHHH
T ss_pred CCCEEEEcCCCCCcccHhhhhhhhHHHHHHHHHHHHHhcCChHHHHHHHHhhhhhHHHHHHHHHHHhhhh--hhhHHHHH
Confidence 689999999999999752 1 223344444444443333332 2333333333333333322222 11111111
Q ss_pred ----HHHHHHHhhcCCCCCCccHHHHHHHHHhCCCCEEEEeCChhhHHHH----------HHhhhhhhhhhcceeeeCCC
Q 026543 81 ----QREETLQTLFPTSELMPGASHLIRHLHAKGIPMCVATGSLARHFEL----------KTQKHRELFSLMHHVVRGDD 146 (237)
Q Consensus 81 ----~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~v~i~s~~~~~~~~~----------~~~~~~gl~~~f~~~~~~~~ 146 (237)
.++..+........+.+++.+++.. +..+++.++........ ..++.+|+..+|+.+++++
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~Fd~v~~~~- 154 (225)
T d2g80a1 80 LQGYVWAHGYESGQIKAPVYADAIDFIKR----KKRVFIYSSGSVKAQKLLFGYVQDPNAPAHDSLDLNSYIDGYFDIN- 154 (225)
T ss_dssp HHHHHHHHHHHTTSCCBCCCHHHHHHHHH----CSCEEEECSSCHHHHHHHHHSBCCTTCTTSCCBCCGGGCCEEECHH-
T ss_pred HHHHHHHHHHHhhcccccchhhHHHHHhh----HHhhhhhhhccchhhhhhhhhhhhhHHHHHHhcCCccccceeeecc-
Confidence 2233333333445677777776643 36778888754433221 1234568889999998876
Q ss_pred CCccCCCCCHHHHHHHHHHcCCCCCCCCcEEEEecCHHHHHHHHHcCCeEEEEcCCCCCcccccchhhhhhhhccc
Q 026543 147 PEVKQGKPSPDIFLAAAKRFEGGPIDSQEILVFEDAPSGVLAAKNAGMSVVMVPDPRLDSSYHSNADQLLSSLLGF 222 (237)
Q Consensus 147 ~~~~~~kp~~~~~~~~l~~~~~~~~~~~~~~~igD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~~~~el 222 (237)
.. ..||++.+|..+++++| ++|++|+||||+.+|+.+|+++|+.+|+|.++.........+..++.+|.||
T Consensus 155 -~~-~~KP~p~~f~~~~~~lg---~~p~e~l~VgD~~~Dv~~A~~aG~~ti~v~r~g~~~~~~~~~~~~i~~~~eL 225 (225)
T d2g80a1 155 -TS-GKKTETQSYANILRDIG---AKASEVLFLSDNPLELDAAAGVGIATGLASRPGNAPVPDGQKYQVYKNFETL 225 (225)
T ss_dssp -HH-CCTTCHHHHHHHHHHHT---CCGGGEEEEESCHHHHHHHHTTTCEEEEECCTTSCCCCSSCCSCEESCSTTC
T ss_pred -cc-CCCCChhHhHHHHHhcc---cCchhceeecCCHHHHHHHHHcCCEEEEEeCCCCCCCcccCCCCccCChhhC
Confidence 44 47999999999999999 9999999999999999999999999999987655444455667778888875
|
| >d1cr6a1 c.108.1.2 (A:4-225) Epoxide hydrolase, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: YihX-like domain: Epoxide hydrolase, N-terminal domain species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.93 E-value=1.2e-26 Score=172.48 Aligned_cols=108 Identities=19% Similarity=0.284 Sum_probs=95.2
Q ss_pred CCCCCCccHHHHHHHHHhCCCCEEEEeCChh---hHHHHHHhhhhhhhhhcceeeeCCCCCccCCCCCHHHHHHHHHHcC
Q 026543 91 PTSELMPGASHLIRHLHAKGIPMCVATGSLA---RHFELKTQKHRELFSLMHHVVRGDDPEVKQGKPSPDIFLAAAKRFE 167 (237)
Q Consensus 91 ~~~~~~~~~~~~l~~l~~~g~~v~i~s~~~~---~~~~~~~~~~~gl~~~f~~~~~~~~~~~~~~kp~~~~~~~~l~~~~ 167 (237)
+...++|++.++|..|+++|++++++||+.. ...........|+..+||.+++++ +.+..||+++.|..++++++
T Consensus 94 ~~~~~~~~~~~~L~~L~~~~~~~~i~s~~~~~~~~~~~~~~~~~~~l~~~fd~i~~s~--~~~~~KP~p~~~~~~~~~~~ 171 (222)
T d1cr6a1 94 AARSINRPMLQAAIALKKKGFTTCIVTNNWLDDGDKRDSLAQMMCELSQHFDFLIESC--QVGMIKPEPQIYNFLLDTLK 171 (222)
T ss_dssp HTCEECHHHHHHHHHHHHTTCEEEEEECCCCCCSSSHHHHHHHHHHHGGGCSEEEEHH--HHSCCTTCHHHHHHHHHHHT
T ss_pred hcCCCCccHHHHHHHHHhcCCceEEeeccccccHHHHHHHHHHhcChHhhhceeeehh--hccCCCCChHHHHHHHHHhC
Confidence 3467899999999999999999999998543 223334456778999999999998 88899999999999999999
Q ss_pred CCCCCCCcEEEEecCHHHHHHHHHcCCeEEEEcCCC
Q 026543 168 GGPIDSQEILVFEDAPSGVLAAKNAGMSVVMVPDPR 203 (237)
Q Consensus 168 ~~~~~~~~~~~igD~~~Di~~a~~~G~~~i~v~~~~ 203 (237)
++|++|+||||+..|+++|+++|+++|+|.++.
T Consensus 172 ---v~p~~~l~IgD~~~Di~~A~~aG~~ti~V~~~~ 204 (222)
T d1cr6a1 172 ---AKPNEVVFLDDFGSNLKPARDMGMVTILVHNTA 204 (222)
T ss_dssp ---SCTTSEEEEESSSTTTHHHHHHTCEEEECCSSS
T ss_pred ---CCcceEEEEECCHHHHHHHHHcCCEEEEECCcc
Confidence 999999999999999999999999999997653
|
| >d1zd3a1 c.108.1.2 (A:2-224) Epoxide hydrolase, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: YihX-like domain: Epoxide hydrolase, N-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.93 E-value=4.1e-25 Score=163.89 Aligned_cols=106 Identities=18% Similarity=0.255 Sum_probs=92.7
Q ss_pred CCCCCccHHHHHHHHHhCCCCEEEEeCChhhH---HHHHHhhhhhhhhhcceeeeCCCCCccCCCCCHHHHHHHHHHcCC
Q 026543 92 TSELMPGASHLIRHLHAKGIPMCVATGSLARH---FELKTQKHRELFSLMHHVVRGDDPEVKQGKPSPDIFLAAAKRFEG 168 (237)
Q Consensus 92 ~~~~~~~~~~~l~~l~~~g~~v~i~s~~~~~~---~~~~~~~~~gl~~~f~~~~~~~~~~~~~~kp~~~~~~~~l~~~~~ 168 (237)
...++|++.+++..|+++|++++++||+.... .........++..+||.+++++ +.+..||++++|..+++++|
T Consensus 97 ~~~~~~~~~~~l~~L~~~~~~~~i~Tn~~~~~~~~~~~~~~~~~~~~~~fd~i~~s~--~~~~~KP~~~~~~~~~~~~~- 173 (225)
T d1zd3a1 97 ARKINRPMLQAALMLRKKGFTTAILTNTWLDDRAERDGLAQLMCELKMHFDFLIESC--QVGMVKPEPQIYKFLLDTLK- 173 (225)
T ss_dssp HCEECHHHHHHHHHHHHTTCEEEEEECCCCCCSTTHHHHHHHHHHHHTTSSEEEEHH--HHTCCTTCHHHHHHHHHHHT-
T ss_pred cCCCCccHHHHHHHHHhccCccccccccchhhHHHHHHHHhhhcChHhhccEEEecc--ccccchhHHHHHHHHhhhcc-
Confidence 36789999999999999999999999965432 2222344557889999999998 88999999999999999999
Q ss_pred CCCCCCcEEEEecCHHHHHHHHHcCCeEEEEcCC
Q 026543 169 GPIDSQEILVFEDAPSGVLAAKNAGMSVVMVPDP 202 (237)
Q Consensus 169 ~~~~~~~~~~igD~~~Di~~a~~~G~~~i~v~~~ 202 (237)
++|++|+||||+..|+++|+++|+++|+|.++
T Consensus 174 --~~p~e~l~VgD~~~Di~~A~~~G~~ti~v~~~ 205 (225)
T d1zd3a1 174 --ASPSEVVFLDDIGANLKPARDLGMVTILVQDT 205 (225)
T ss_dssp --CCGGGEEEEESCHHHHHHHHHTTCEEEECSSH
T ss_pred --cCccceeEEecCHHHHHHHHHcCCEEEEECCc
Confidence 99999999999999999999999999999753
|
| >d1u7pa_ c.108.1.17 (A:) Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Magnesium-dependent phosphatase-1, Mdp1 domain: Magnesium-dependent phosphatase-1, Mdp1 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.93 E-value=9.5e-27 Score=165.03 Aligned_cols=103 Identities=12% Similarity=0.171 Sum_probs=92.3
Q ss_pred CCCCCccHHHHHHHHHhCCCCEEEEeCChhhHHHHHHhhhhhhhhhcceeeeCCCCCccCCCCCHHHHHHHHHHcCCCCC
Q 026543 92 TSELMPGASHLIRHLHAKGIPMCVATGSLARHFELKTQKHRELFSLMHHVVRGDDPEVKQGKPSPDIFLAAAKRFEGGPI 171 (237)
Q Consensus 92 ~~~~~~~~~~~l~~l~~~g~~v~i~s~~~~~~~~~~~~~~~gl~~~f~~~~~~~~~~~~~~kp~~~~~~~~l~~~~~~~~ 171 (237)
.+.++||+.++|+.|+++|++++|+||+........+++.+++..+|+.+..+. ||++..+..+++++| +
T Consensus 44 ~~~l~pgv~e~L~~L~~~G~~~~v~S~~~~~~~~~~~l~~~~~~~~~~~~~~~~-------kp~~~~~~~~~~~~~---~ 113 (164)
T d1u7pa_ 44 NIQLYPEVPEVLGRLQSLGVPVAAASRTSEIQGANQLLELFDLGKYFIQREIYP-------GSKVTHFERLHHKTG---V 113 (164)
T ss_dssp EECCCTTHHHHHHHHHHTTCCEEEEECCSCHHHHHHHHHHTTCGGGCSEEEESS-------SCHHHHHHHHHHHHC---C
T ss_pred ccccchHHHHHHHHHHHCCCcEEEEeccccchhhccchhcccccccceeeeccc-------CCChHHHHHHHHHhC---C
Confidence 467999999999999999999999998776666666778888888888776554 799999999999999 9
Q ss_pred CCCcEEEEecCHHHHHHHHHcCCeEEEEcCCCC
Q 026543 172 DSQEILVFEDAPSGVLAAKNAGMSVVMVPDPRL 204 (237)
Q Consensus 172 ~~~~~~~igD~~~Di~~a~~~G~~~i~v~~~~~ 204 (237)
+|++|+||||+..|+++|+++|+.+|+|.+|..
T Consensus 114 ~~~~~l~igD~~~di~aA~~aG~~~i~v~~G~~ 146 (164)
T d1u7pa_ 114 PFSQMVFFDDENRNIIDVGRLGVTCIHIRDGMS 146 (164)
T ss_dssp CGGGEEEEESCHHHHHHHHTTTCEEEECSSCCC
T ss_pred ChHHEEEEcCCHHHHHHHHHcCCEEEEECCCCC
Confidence 999999999999999999999999999998865
|
| >d2b0ca1 c.108.1.2 (A:8-204) Putative phosphatase YihX {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: YihX-like domain: Putative phosphatase YihX species: Escherichia coli [TaxId: 562]
Probab=99.93 E-value=2e-25 Score=162.09 Aligned_cols=175 Identities=17% Similarity=0.223 Sum_probs=125.4
Q ss_pred EEEEecCcccccchhhHHHHHHHHHHHcCCCCCHHHHHHh------------cCCChHHHHHHHHHHhCCCCCCCHHHHH
Q 026543 12 HVIFDMDGLLLDTEKFYTEVQELILARYNKTFDWSLKAKM------------MGKKAIEAAQVFVEETGISDKLSAEDFL 79 (237)
Q Consensus 12 ~vifD~DGTL~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (237)
+++||+||||+++.. ...+..+.+..+.. .+..... .........+.+....+.. .......
T Consensus 2 l~iFDlDgtL~d~~~--~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~ 75 (197)
T d2b0ca1 2 LYIFDLGNVIVDIDF--NRVLGAWSDLTRIP--LASLKKSFHMGEAFHQHERGEISDEAFAEALCHEMALP--LSYEQFS 75 (197)
T ss_dssp EEEECCBTTTEEEET--HHHHHHHHHHHCCC--HHHHHHHCCCCHHHHHHHTTCSCHHHHHHHHHHHHTCC--CCHHHHH
T ss_pred EEEEeCCCCcCcCHH--HHHHHHHHHHhCCC--HHHHHHHHhcccHHHHHHhccccHHHHHHHHhhhhccc--hhHHHHH
Confidence 578999999998763 22333333434432 1121111 1123344444455555544 3322222
Q ss_pred HHHHHHHHhhcCCCCCCccHHHHHHHHHhCCCCEEEEeCChhhHHHHHHhhhhhhhhhcceeeeCCCCCccCCCCCHHHH
Q 026543 80 VQREETLQTLFPTSELMPGASHLIRHLHAKGIPMCVATGSLARHFELKTQKHRELFSLMHHVVRGDDPEVKQGKPSPDIF 159 (237)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~v~i~s~~~~~~~~~~~~~~~gl~~~f~~~~~~~~~~~~~~kp~~~~~ 159 (237)
.... .....+.+++.+++..++++|+.++++||+........+.+..++..+|+.+++++ +.+..||+++.|
T Consensus 76 ~~~~------~~~~~~~~~~~~l~~~l~~~~~~~~i~t~~~~~~~~~~~~~~~~l~~~fd~v~~s~--~~~~~Kp~~~~~ 147 (197)
T d2b0ca1 76 HGWQ------AVFVALRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEEYPEIRDAADHIYLSQ--DLGMRKPEARIY 147 (197)
T ss_dssp HHHH------TCEEEECHHHHHHHHHHHHTTCEEEEEECCCCCTTSCCGGGCHHHHHHCSEEEEHH--HHTCCTTCHHHH
T ss_pred HHHH------HhccccCchhHHHHHHHHhcCCeEEEEeCccHHHHHHHHHHcccchhhccceeecc--cccccccchHHH
Confidence 1111 12357899999999999999999999999776655544444458999999999998 889999999999
Q ss_pred HHHHHHcCCCCCCCCcEEEEecCHHHHHHHHHcCCeEEEEcCCC
Q 026543 160 LAAAKRFEGGPIDSQEILVFEDAPSGVLAAKNAGMSVVMVPDPR 203 (237)
Q Consensus 160 ~~~l~~~~~~~~~~~~~~~igD~~~Di~~a~~~G~~~i~v~~~~ 203 (237)
+.+++++| ++|++|+||||+.+|+++|+++|+++|+|..+.
T Consensus 148 ~~~~~~~~---~~~~~~l~vgDs~~di~~A~~aG~~ti~v~~~~ 188 (197)
T d2b0ca1 148 QHVLQAEG---FSPSDTVFFDDNADNIEGANQLGITSILVKDKT 188 (197)
T ss_dssp HHHHHHHT---CCGGGEEEEESCHHHHHHHHTTTCEEEECCSTT
T ss_pred HHHHHhcC---CCCCeEEEEeCCHHHHHHHHHcCCEEEEECCCC
Confidence 99999999 999999999999999999999999999997653
|
| >d1nnla_ c.108.1.4 (A:) Phosphoserine phosphatase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.86 E-value=8.7e-22 Score=145.43 Aligned_cols=192 Identities=13% Similarity=0.124 Sum_probs=111.9
Q ss_pred ccEEEEecCcccccchhhHHHHHHHHHHHcCCCCCHHHH-HHh-cC-CChHHHHHHHHHHhCCCCCCCHHHHHHHHHHHH
Q 026543 10 ITHVIFDMDGLLLDTEKFYTEVQELILARYNKTFDWSLK-AKM-MG-KKAIEAAQVFVEETGISDKLSAEDFLVQREETL 86 (237)
Q Consensus 10 ~~~vifD~DGTL~~~~~~~~~~~~~~~~~~g~~~~~~~~-~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (237)
.++|+|||||||++++ .|..+....|.......+ .+. .| .+..+.+......+. -...+. .+...
T Consensus 10 ~~aV~FD~DGTLi~~e-----~~~~l~~~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~----~~~~~~---~~~~~ 77 (217)
T d1nnla_ 10 ADAVCFDVDSTVIREE-----GIDELAKICGVEDAVSEMTRRAMGGAVPFKAALTERLALIQ----PSREQV---QRLIA 77 (217)
T ss_dssp CSEEEEETBTTTBSSC-----HHHHHHHHTTCTTTC------------CHHHHHHHHHHHHC----CCHHHH---HHHHH
T ss_pred CCEEEEcCccccCCcc-----HHHHHHHHcCChHHHHHHHHHHHcCCCCHHHHHHHHHHhcc----cchHHH---HHHHH
Confidence 4899999999999886 345555666664322111 111 11 122222222222221 111111 11111
Q ss_pred HhhcCCCCCCccHHHHHHHHHhCCCCEEEEeCChhhHHHHHHhhhhhhhhhc------c----eeeeCCCC--CccCCCC
Q 026543 87 QTLFPTSELMPGASHLIRHLHAKGIPMCVATGSLARHFELKTQKHRELFSLM------H----HVVRGDDP--EVKQGKP 154 (237)
Q Consensus 87 ~~~~~~~~~~~~~~~~l~~l~~~g~~v~i~s~~~~~~~~~~~~~~~gl~~~f------~----~~~~~~~~--~~~~~kp 154 (237)
+ ....++||+.++++.|+++|++++|+|++... ....+++.+|+..+. . ..+.+... .......
T Consensus 78 ~---~~~~l~pg~~~~i~~lk~~G~~~~ivS~~~~~-~v~~i~~~lgi~~~~v~an~~~~~~~G~~~g~~~~~p~~~~~~ 153 (217)
T d1nnla_ 78 E---QPPHLTPGIRELVSRLQERNVQVFLISGGFRS-IVEHVASKLNIPATNVFANRLKFYFNGEYAGFDETQPTAESGG 153 (217)
T ss_dssp H---SCCCBCTTHHHHHHHHHHTTCEEEEEEEEEHH-HHHHHHHHTTCCGGGEEEECEEECTTSCEEEECTTSGGGSTTH
T ss_pred h---hccccCHHHHHHHHHHHhCCCEEEEECCCchH-HHHHHHHHhCCcccceeeeeeeeeehhccccceeeeeeeccch
Confidence 1 34678999999999999999999999996655 455788888886431 1 11111100 0111222
Q ss_pred CHHHHHHHHHHcCCCCCCCCcEEEEecCHHHHHHHHHcCCeEEEEcCCCCCcccccchhhhhhhhcccC
Q 026543 155 SPDIFLAAAKRFEGGPIDSQEILVFEDAPSGVLAAKNAGMSVVMVPDPRLDSSYHSNADQLLSSLLGFN 223 (237)
Q Consensus 155 ~~~~~~~~l~~~~~~~~~~~~~~~igD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~~~~el~ 223 (237)
+......+.++ .++++|++||||.+|+.|++.+|+.+ .+.........+..+++.+.||.||.
T Consensus 154 K~~~v~~~~~~-----~~~~~~~~vGDs~~Di~~~~~ag~~v-a~~~~~~~~~~~~~ad~~i~~f~ell 216 (217)
T d1nnla_ 154 KGKVIKLLKEK-----FHFKKIIMIGDGATDMEACPPADAFI-GFGGNVIRQQVKDNAKWYITDFVELL 216 (217)
T ss_dssp HHHHHHHHHHH-----HCCSCEEEEESSHHHHTTTTTSSEEE-EECSSCCCHHHHHHCSEEESCGGGGC
T ss_pred HHHHHHHHHhc-----cCccccEEEEeCHhhHHHHHhCCceE-EECCCHHHHHHHHhCCCEeCCHHHhc
Confidence 34445555444 45789999999999999999999653 33322222334567889999999874
|
| >d2fpwa1 c.108.1.19 (A:3-163) Histidine biosynthesis bifunctional protein HisB, phosphatase domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: Histidine biosynthesis bifunctional protein HisB, phosphatase domain species: Escherichia coli [TaxId: 562]
Probab=99.85 E-value=1.1e-22 Score=142.52 Aligned_cols=107 Identities=15% Similarity=0.135 Sum_probs=76.6
Q ss_pred CCCCCccHHHHHHHHHhCCCCEEEEeCChh--------hH---HHHHHhhhhhhh-hhccee-----eeCCCCCccCCCC
Q 026543 92 TSELMPGASHLIRHLHAKGIPMCVATGSLA--------RH---FELKTQKHRELF-SLMHHV-----VRGDDPEVKQGKP 154 (237)
Q Consensus 92 ~~~~~~~~~~~l~~l~~~g~~v~i~s~~~~--------~~---~~~~~~~~~gl~-~~f~~~-----~~~~~~~~~~~kp 154 (237)
.+.++||+.++|+.|+++|++++++||.+. .. ....+.+.+... -.++.+ ...+ +....||
T Consensus 28 ~~~~~pgv~e~L~~L~~~g~~l~i~TNq~~ia~~~~~~~~~~~~~~~l~~~l~~~~~~~~~i~~~~~~~~~--~~~~~KP 105 (161)
T d2fpwa1 28 KLAFEPGVIPQLLKLQKAGYKLVMITNQDGLGTQSFPQADFDGPHNLMMQIFTSQGVQFDEVLICPHLPAD--ECDCRKP 105 (161)
T ss_dssp GCCBCTTHHHHHHHHHHTTEEEEEEEECTTTTSTTSCHHHHHHHHHHHHHHHHHTTCCEEEEEEECCCGGG--CCSSSTT
T ss_pred HceECccHHHHHHHHHHcCCceeeecccccchhHHHHHHHhhhhhhhhhhhccccccccceeeeccccccc--ccccccc
Confidence 367999999999999999999999998531 00 111111111111 112322 2233 4567899
Q ss_pred CHHHHHHHHHHcCCCCCCCCcEEEEecCHHHHHHHHHcCCeEEEEcCCC
Q 026543 155 SPDIFLAAAKRFEGGPIDSQEILVFEDAPSGVLAAKNAGMSVVMVPDPR 203 (237)
Q Consensus 155 ~~~~~~~~l~~~~~~~~~~~~~~~igD~~~Di~~a~~~G~~~i~v~~~~ 203 (237)
+|.++..++++++ ++|++++||||+..|+++|+++|+++++|.++.
T Consensus 106 ~p~~~~~~~~~~~---id~~~~~~IGD~~~Di~aA~~aG~~~i~i~~~~ 151 (161)
T d2fpwa1 106 KVKLVERYLAEQA---MDRANSYVIGDRATDIQLAENMGINGLRYDRET 151 (161)
T ss_dssp SSGGGGGGC-------CCGGGCEEEESSHHHHHHHHHHTSEEEECBTTT
T ss_pred ccHHHHHHHHhcC---CChhcEEEECCCHHHHHHHHHcCCeEEEECCCC
Confidence 9999999999999 999999999999999999999999999997764
|
| >d2feaa1 c.108.1.20 (A:2-227) 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: MtnX-like domain: 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX species: Bacillus subtilis [TaxId: 1423]
Probab=99.85 E-value=2.9e-22 Score=148.92 Aligned_cols=198 Identities=12% Similarity=0.069 Sum_probs=119.2
Q ss_pred CccEEEEecCcccccchhhHHHHHHHHHHHcCCCCCHHHHHHhc-C-CChHHHHHHHHHHhCCCCCCCHHHHHHHHHHHH
Q 026543 9 PITHVIFDMDGLLLDTEKFYTEVQELILARYNKTFDWSLKAKMM-G-KKAIEAAQVFVEETGISDKLSAEDFLVQREETL 86 (237)
Q Consensus 9 ~~~~vifD~DGTL~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (237)
+..+|+|||||||++++ .+..+++.++.....+....+. + .+... .+...+.... ....+......
T Consensus 3 ~k~lVifD~DGTL~~~d-----~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~---~~~~~~~~~~----~~~~~~~~~~~ 70 (226)
T d2feaa1 3 RKPFIICDFDGTITMND-----NIINIMKTFAPPEWMALKDGVLSKTLSIKE---GVGRMFGLLP----SSLKEEITSFV 70 (226)
T ss_dssp CCEEEEECCTTTTBSSC-----HHHHHHHHHSCTHHHHHHHHHHTTSSCHHH---HHHHHHTTSB----GGGHHHHHHHH
T ss_pred CCeEEEEeCCCCCcCch-----HHHHHHHHHCcchHHHHHHHHHcCcccHHH---HHHHHHHHhc----cccHHHHHHHH
Confidence 34689999999999876 3344555555432112211111 1 12222 2222222221 11111111111
Q ss_pred HhhcCCCCCCccHHHHHHHHHhCCCCEEEEeCChhhHHHHHHhhhhhhhhhcce---eeeCC--------CCCccCCCCC
Q 026543 87 QTLFPTSELMPGASHLIRHLHAKGIPMCVATGSLARHFELKTQKHRELFSLMHH---VVRGD--------DPEVKQGKPS 155 (237)
Q Consensus 87 ~~~~~~~~~~~~~~~~l~~l~~~g~~v~i~s~~~~~~~~~~~~~~~gl~~~f~~---~~~~~--------~~~~~~~kp~ 155 (237)
....+++||+.++++.|+++|++++++|++....+. .+++.+|+..+|.. .+..+ .......+++
T Consensus 71 ---~~~~~l~pg~~~~l~~L~~~g~~~~ivS~~~~~~i~-~~l~~l~~~~~~~an~~~~~~~~~~~~~~~~~~~~~~~~k 146 (226)
T d2feaa1 71 ---LEDAKIREGFREFVAFINEHEIPFYVISGGMDFFVY-PLLEGIVEKDRIYCNHASFDNDYIHIDWPHSCKGTCSNQC 146 (226)
T ss_dssp ---HHHCCBCTTHHHHHHHHHHHTCCEEEEEEEEHHHHH-HHHTTTSCGGGEEEEEEECSSSBCEEECTTCCCTTCCSCC
T ss_pred ---HhccchhHHHHHHHHHHHhcccccccCCcchhhhHH-HHHHHcCCccceeeeeEEEeCCcceeccccccccccccCC
Confidence 223679999999999999999999999996665544 56777777766522 11111 0022345678
Q ss_pred HHHHHHHHHHcCCCCCCCCcEEEEecCHHHHHHHHHcCCeEEEEcCCCC-Ccc-cccchhhhhhhhcccCCCCCC
Q 026543 156 PDIFLAAAKRFEGGPIDSQEILVFEDAPSGVLAAKNAGMSVVMVPDPRL-DSS-YHSNADQLLSSLLGFNPKDWG 228 (237)
Q Consensus 156 ~~~~~~~l~~~~~~~~~~~~~~~igD~~~Di~~a~~~G~~~i~v~~~~~-~~~-~~~~~~~~~~~~~el~~~l~~ 228 (237)
+..+..++++++ +++++++|||||.+|++||++||+. +..+.. ... ....+...+++|+|+...+..
T Consensus 147 ~~~~~~~~~~~~---~~~~~~i~iGDs~~Dl~~a~~A~~~---~a~~~~~~~~~~~~~~~~~~~d~~~i~~~l~~ 215 (226)
T d2feaa1 147 GCCKPSVIHELS---EPNQYIIMIGDSVTDVEAAKLSDLC---FARDYLLNECREQNLNHLPYQDFYEIRKEIEN 215 (226)
T ss_dssp SSCHHHHHHHHC---CTTCEEEEEECCGGGHHHHHTCSEE---EECHHHHHHHHHTTCCEECCSSHHHHHHHHHT
T ss_pred HHHHHHHHHHhc---CCCceEEEEeCchhhHHHHHHCCEE---EEecchHHHHHHcCCCeeecCCHHHHHHHHHH
Confidence 888999999999 9999999999999999999999953 333222 111 122334456777776554433
|
| >d2c4na1 c.108.1.14 (A:1-250) NagD {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: NagD species: Escherichia coli [TaxId: 562]
Probab=99.85 E-value=5.3e-22 Score=149.81 Aligned_cols=84 Identities=21% Similarity=0.270 Sum_probs=70.5
Q ss_pred hhhhcceeeeCCCCCccCCCCCHHHHHHHHHHcCCCCCCCCcEEEEecCH-HHHHHHHHcCCeEEEEcCCCCCccc----
Q 026543 134 LFSLMHHVVRGDDPEVKQGKPSPDIFLAAAKRFEGGPIDSQEILVFEDAP-SGVLAAKNAGMSVVMVPDPRLDSSY---- 208 (237)
Q Consensus 134 l~~~f~~~~~~~~~~~~~~kp~~~~~~~~l~~~~~~~~~~~~~~~igD~~-~Di~~a~~~G~~~i~v~~~~~~~~~---- 208 (237)
+..+++.....+ ....+||+|..+..+++++| ++|++|+||||++ +|+.+|+++||++|+|.+|......
T Consensus 159 ~~~~~~~~~~~~--~~~~~KP~p~~~~~a~~~lg---i~p~e~v~IGD~~~~DI~~a~~aG~~tilV~~G~~~~~~l~~~ 233 (250)
T d2c4na1 159 LCAGIEKISGRK--PFYVGKPSPWIIRAALNKMQ---AHSEETVIVGDNLRTDILAGFQAGLETILVLSGVSSLDDIDSM 233 (250)
T ss_dssp HHHHHHHHHCCC--CEECSTTSTHHHHHHHHHHT---CCGGGEEEEESCTTTHHHHHHHTTCEEEEESSSSCCGGGGSSC
T ss_pred hHHHHHHhhccc--chhcccchhhhHhhhhhhhc---CCchheEEecCChHHHHHHHHHCCCCEEEECCCCCCHHHHHhC
Confidence 445556555556 66788999999999999999 9999999999997 6999999999999999988763321
Q ss_pred ccchhhhhhhhccc
Q 026543 209 HSNADQLLSSLLGF 222 (237)
Q Consensus 209 ~~~~~~~~~~~~el 222 (237)
...||++++|+.||
T Consensus 234 ~~~pd~i~~sl~eL 247 (250)
T d2c4na1 234 PFRPSWIYPSVAEI 247 (250)
T ss_dssp SSCCSEEESSGGGC
T ss_pred CCCCCEEECCHHHh
Confidence 24579999999997
|
| >d2gmwa1 c.108.1.19 (A:24-205) D,D-heptose 1,7-bisphosphate phosphatase GmhB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: D,D-heptose 1,7-bisphosphate phosphatase GmhB species: Escherichia coli [TaxId: 562]
Probab=99.85 E-value=1.5e-21 Score=140.14 Aligned_cols=131 Identities=19% Similarity=0.149 Sum_probs=94.0
Q ss_pred CCCCccHHHHHHHHHhCCCCEEEEeCChhhHH-----------HHHHhhhhhhh-hhcc-eeeeCCC---------CCcc
Q 026543 93 SELMPGASHLIRHLHAKGIPMCVATGSLARHF-----------ELKTQKHRELF-SLMH-HVVRGDD---------PEVK 150 (237)
Q Consensus 93 ~~~~~~~~~~l~~l~~~g~~v~i~s~~~~~~~-----------~~~~~~~~gl~-~~f~-~~~~~~~---------~~~~ 150 (237)
++++||+.++|+.|+++|++++++||...-.. ...+...+... ..++ ..+|... ....
T Consensus 26 ~~~~~gv~e~l~~L~~~g~~~~ivTNq~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~cp~~p~~~~~~~~~~~~ 105 (182)
T d2gmwa1 26 FEFIDGVIDAMRELKKMGFALVVVTNQSGIARGKFTEAQFETLTEWMDWSLADRDVDLDGIYYCPHHPQGSVEEFRQVCD 105 (182)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEEEECTHHHHTSSCHHHHHHHHHHHHHHHHHTTCCCSEEEEECCBTTCSSGGGBSCCS
T ss_pred eeECCCHHHHHHHHhhcCchhhhhhccchhhhhhhHHHhhhhhhhhhhhhhhhhcccccceeeccccccccccccccccc
Confidence 56899999999999999999999999542110 00011111000 1122 2233210 1345
Q ss_pred CCCCCHHHHHHHHHHcCCCCCCCCcEEEEecCHHHHHHHHHcCCeE-EEEcCCCCC-cccccchhhhhhhhcccCCCC
Q 026543 151 QGKPSPDIFLAAAKRFEGGPIDSQEILVFEDAPSGVLAAKNAGMSV-VMVPDPRLD-SSYHSNADQLLSSLLGFNPKD 226 (237)
Q Consensus 151 ~~kp~~~~~~~~l~~~~~~~~~~~~~~~igD~~~Di~~a~~~G~~~-i~v~~~~~~-~~~~~~~~~~~~~~~el~~~l 226 (237)
+.||+|.++..++++++ +++++++||||+.+|+++|++||+.+ ++|.++... +.....++++++++.|+...+
T Consensus 106 ~rKP~p~m~~~~~~~~~---i~~~~s~mVGDs~~Di~aA~~Ag~~~~~lv~~g~~~~~~~~~~ad~v~~~l~dl~~~i 180 (182)
T d2gmwa1 106 CRKPHPGMLLSARDYLH---IDMAASYMVGDKLEDMQAAVAANVGTKVLVRTGKPITPEAENAADWVLNSLADLPQAI 180 (182)
T ss_dssp SSTTSCHHHHHHHHHHT---BCGGGCEEEESSHHHHHHHHHTTCSEEEEESSSSCCCHHHHHHCSEEESCGGGHHHHH
T ss_pred ccCCccccccchhhhcc---cccccccccCCCHHHHHHHHHhCCCcEEEECCCCCCCcccccCCCEEECCHHHHHHHh
Confidence 67999999999999999 99999999999999999999999964 777776653 334567999999999986543
|
| >d2o2xa1 c.108.1.19 (A:8-216) Hypothetical protein Mll2559 {Mesorhizobium loti [TaxId: 381]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: Hypothetical protein Mll2559 species: Mesorhizobium loti [TaxId: 381]
Probab=99.85 E-value=5.7e-21 Score=139.42 Aligned_cols=109 Identities=23% Similarity=0.286 Sum_probs=81.6
Q ss_pred CCCCccHHHHHHHHHhCCCCEEEEeCChh-----------hHHHHHHhhhhhhhh-hcceeeeCCC----------CCcc
Q 026543 93 SELMPGASHLIRHLHAKGIPMCVATGSLA-----------RHFELKTQKHRELFS-LMHHVVRGDD----------PEVK 150 (237)
Q Consensus 93 ~~~~~~~~~~l~~l~~~g~~v~i~s~~~~-----------~~~~~~~~~~~gl~~-~f~~~~~~~~----------~~~~ 150 (237)
..++||+.++|+.|+++|++++|+||-.. ..+...+.+.++... .++.++.... .+..
T Consensus 47 ~~l~pgv~e~L~~L~~~G~~l~IvTNQ~gi~~g~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 126 (209)
T d2o2xa1 47 IVLRPQMLPAIATANRAGIPVVVVTNQSGIARGYFGWSAFAAVNGRVLELLREEGVFVDMVLACAYHEAGVGPLAIPDHP 126 (209)
T ss_dssp CCBCGGGHHHHHHHHHHTCCEEEEEECHHHHTTSCCHHHHHHHHHHHHHHHHHTTCCCSEEEEECCCTTCCSTTCCSSCT
T ss_pred eEecccHHHHHHHHHhhCCeEEEecccccchhhhhhhhhhhhhhhHHHHHhhhcccccceEEEecccccccccccccccc
Confidence 56899999999999999999999998321 112222333222222 2333332210 0233
Q ss_pred CCCCCHHHHHHHHHHcCCCCCCCCcEEEEecCHHHHHHHHHcCCeEEEEcCCCC
Q 026543 151 QGKPSPDIFLAAAKRFEGGPIDSQEILVFEDAPSGVLAAKNAGMSVVMVPDPRL 204 (237)
Q Consensus 151 ~~kp~~~~~~~~l~~~~~~~~~~~~~~~igD~~~Di~~a~~~G~~~i~v~~~~~ 204 (237)
+.||+|.++..++++++ +++++|+||||+.+|+++|++||+++++|.++..
T Consensus 127 ~rKP~p~ml~~a~~~~~---i~~~~~~~VGD~~~Di~aA~~AGi~~i~v~~g~~ 177 (209)
T d2o2xa1 127 MRKPNPGMLVEAGKRLA---LDLQRSLIVGDKLADMQAGKRAGLAQGWLVDGEA 177 (209)
T ss_dssp TSTTSCHHHHHHHHHHT---CCGGGCEEEESSHHHHHHHHHTTCSEEEEETCCC
T ss_pred cccccchhhhHhHHHhC---CCccceEEeCCCHHHHHHHHHCCCcEEEEeCCCC
Confidence 46999999999999999 9999999999999999999999999999988765
|
| >d1wvia_ c.108.1.14 (A:) Putative phosphatase SMU.1415c {Streptococcus mutans [TaxId: 1309]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Putative phosphatase SMU.1415c species: Streptococcus mutans [TaxId: 1309]
Probab=99.84 E-value=2.5e-21 Score=146.35 Aligned_cols=120 Identities=16% Similarity=0.188 Sum_probs=82.6
Q ss_pred HHHHHHHHHhCCCCEEEEeCChhhHHHHH--HhhhhhhhhhcceeeeCCCCCccCCCCCHHHHHHHHHHcCCCCCCCCcE
Q 026543 99 ASHLIRHLHAKGIPMCVATGSLARHFELK--TQKHRELFSLMHHVVRGDDPEVKQGKPSPDIFLAAAKRFEGGPIDSQEI 176 (237)
Q Consensus 99 ~~~~l~~l~~~g~~v~i~s~~~~~~~~~~--~~~~~gl~~~f~~~~~~~~~~~~~~kp~~~~~~~~l~~~~~~~~~~~~~ 176 (237)
....+..+..++....|+||......... ......+...+....+.+ ....+||+|.++..+++++| ++|++|
T Consensus 126 ~~~~~~~~~~~~~~~~i~tn~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~gKP~p~~~~~al~~l~---i~~~~~ 200 (253)
T d1wvia_ 126 EKLTLATLAIQKGAVFIGTNPDLNIPTERGLLPGAGAILFLLEKATRVK--PIIIGKPEAVIMNKALDRLG---VKRHEA 200 (253)
T ss_dssp HHHHHHHHHHHTTCEEEESCCCSEEEETTEEEECHHHHHHHHHHHHCCC--CEECSTTSHHHHHHHHHHHT---SCGGGE
T ss_pred HHHHHHhhhhhhccccccCCCCceeEcCCcccccCCcchhcccccccce--eEEeccCCcccceehhhhcc---ccccce
Confidence 34444444445566778888543221100 011111223333344444 55577999999999999999 999999
Q ss_pred EEEecCH-HHHHHHHHcCCeEEEEcCCCCCcc----cccchhhhhhhhcccC
Q 026543 177 LVFEDAP-SGVLAAKNAGMSVVMVPDPRLDSS----YHSNADQLLSSLLGFN 223 (237)
Q Consensus 177 ~~igD~~-~Di~~a~~~G~~~i~v~~~~~~~~----~~~~~~~~~~~~~el~ 223 (237)
+||||+. +||++|+++||++|+|.+|..... ....||++++|+.|+.
T Consensus 201 ~mIGDs~~~DI~gA~~aG~~si~V~~G~~~~~~~~~~~~~PD~vi~sl~e~~ 252 (253)
T d1wvia_ 201 IMVGDNYLTDITAGIKNDIATLLVTTGFTKPEEVPALPIQPDFVLSSLAEWD 252 (253)
T ss_dssp EEEESCTTTTHHHHHHTTCEEEEESSSSSCTTTGGGCSSCCSEEESCGGGCC
T ss_pred EEEcCChHHHHHHHHHCCCCEEEECCCCCCHHHHhhcCCCCCEEECCHHHcC
Confidence 9999997 599999999999999998865322 2345799999999973
|
| >d1yv9a1 c.108.1.14 (A:4-256) Putative hydrolase EF1188 {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Putative hydrolase EF1188 species: Enterococcus faecalis [TaxId: 1351]
Probab=99.83 E-value=1.2e-21 Score=148.03 Aligned_cols=109 Identities=11% Similarity=0.152 Sum_probs=79.7
Q ss_pred CCCEEEEeCChhhHHH--HHHhhhhhhhhhcceeeeCCCCCccCCCCCHHHHHHHHHHcCCCCCCCCcEEEEecCH-HHH
Q 026543 110 GIPMCVATGSLARHFE--LKTQKHRELFSLMHHVVRGDDPEVKQGKPSPDIFLAAAKRFEGGPIDSQEILVFEDAP-SGV 186 (237)
Q Consensus 110 g~~v~i~s~~~~~~~~--~~~~~~~gl~~~f~~~~~~~~~~~~~~kp~~~~~~~~l~~~~~~~~~~~~~~~igD~~-~Di 186 (237)
+....+++|....... ........+..++..+.+.. ....+||++.++..+++++| ++|++|+||||+. +||
T Consensus 137 ~~~~~i~~n~d~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~KP~~~~~~~~~~~~g---i~~~~~l~IGD~~~~DI 211 (253)
T d1yv9a1 137 KGALFIGTNPDKNIPTERGLLPGAGSVVTFVETATQTK--PVYIGKPKAIIMERAIAHLG---VEKEQVIMVGDNYETDI 211 (253)
T ss_dssp TTCEEEESCCCSEEEETTEEEECHHHHHHHHHHHHTCC--CEECSTTSHHHHHHHHHHHC---SCGGGEEEEESCTTTHH
T ss_pred cccceeeecCCccccccCceeeecccccccccccccce--eeeecccchhHHHHHHHHhC---CCccceEEecCChHHHH
Confidence 4567777774321100 00111122444555666666 66789999999999999999 9999999999997 699
Q ss_pred HHHHHcCCeEEEEcCCCCCc----ccccchhhhhhhhcccC
Q 026543 187 LAAKNAGMSVVMVPDPRLDS----SYHSNADQLLSSLLGFN 223 (237)
Q Consensus 187 ~~a~~~G~~~i~v~~~~~~~----~~~~~~~~~~~~~~el~ 223 (237)
++|+++|+++++|.+|.... .....||++++|+.|+.
T Consensus 212 ~~a~~aG~~si~V~~G~~~~~~~~~~~~~Pd~vi~sl~e~~ 252 (253)
T d1yv9a1 212 QSGIQNGIDSLLVTSGFTPKSAVPTLPTPPTYVVDSLDEWT 252 (253)
T ss_dssp HHHHHHTCEEEEETTSSSCSSSTTTCSSCCSEEESSGGGCC
T ss_pred HHHHHCCCCEEEECCCCCCHHHHHhcCCCCCEEECCHHHcC
Confidence 99999999999998876521 23456899999999984
|
| >d1j97a_ c.108.1.4 (A:) Phosphoserine phosphatase {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=99.83 E-value=1.8e-20 Score=137.20 Aligned_cols=195 Identities=17% Similarity=0.167 Sum_probs=121.8
Q ss_pred CCccEEEEecCcccccchhhHHHHHHHHHHHcCCCCCHHHH--HHhc-CCChHHHHHHHHHHhCCCCCCCHHHHHHHHHH
Q 026543 8 KPITHVIFDMDGLLLDTEKFYTEVQELILARYNKTFDWSLK--AKMM-GKKAIEAAQVFVEETGISDKLSAEDFLVQREE 84 (237)
Q Consensus 8 ~~~~~vifD~DGTL~~~~~~~~~~~~~~~~~~g~~~~~~~~--~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (237)
++.|+|+|||||||++++ .+..+++..|+....... .... ............... .. ... .
T Consensus 2 ~kkKlv~FDlDGTL~d~e-----s~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~--~~~--------~ 65 (210)
T d1j97a_ 2 KKKKLILFDFDSTLVNNE-----TIDEIAREAGVEEEVKKITKEAMEGKLNFEQSLRKRVSLL-KD--LPI--------E 65 (210)
T ss_dssp CCCCEEEECCCCCCBSSC-----HHHHHHHHTTCHHHHHHHHHHHHTTSSCHHHHHHHHHHTT-TT--CBH--------H
T ss_pred CCCeEEEEeCCCCcCCch-----HHHHHHHHcCCcHHHHHHHHHHhcccchhHHHHHHHHHHH-hh--hHH--------H
Confidence 357999999999999986 455566666652111111 0011 111111111111110 00 111 1
Q ss_pred HHHhhcCCCCCCccHHHHHHHHHhCCCCEEEEeCChhhHHHHHHhhhhhhhhhcceeeeCCC--------CCccCCCCCH
Q 026543 85 TLQTLFPTSELMPGASHLIRHLHAKGIPMCVATGSLARHFELKTQKHRELFSLMHHVVRGDD--------PEVKQGKPSP 156 (237)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~l~~l~~~g~~v~i~s~~~~~~~~~~~~~~~gl~~~f~~~~~~~~--------~~~~~~kp~~ 156 (237)
..........+.+++.+.+..+..+|..++++|+....... ...+..+...++...+..++ .....+++++
T Consensus 66 ~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 144 (210)
T d1j97a_ 66 KVEKAIKRITPTEGAEETIKELKNRGYVVAVVSGGFDIAVN-KIKEKLGLDYAFANRLIVKDGKLTGDVEGEVLKENAKG 144 (210)
T ss_dssp HHHHHHHTCCBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHH-HHHHHHTCSEEEEEEEEEETTEEEEEEECSSCSTTHHH
T ss_pred HHHHHhhhhhhhhhHHHHHHHHHHcCCEEEeeccccccccc-chhhccchhhhhhhhhcccccccccccccccccccccc
Confidence 11122234679999999999999999999999986555444 34455555555443332220 1334566778
Q ss_pred HHHHHHHHHcCCCCCCCCcEEEEecCHHHHHHHHHcCCeEEEEcCCCCCcccccchhhhhhh--hcccCCCC
Q 026543 157 DIFLAAAKRFEGGPIDSQEILVFEDAPSGVLAAKNAGMSVVMVPDPRLDSSYHSNADQLLSS--LLGFNPKD 226 (237)
Q Consensus 157 ~~~~~~l~~~~~~~~~~~~~~~igD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~~--~~el~~~l 226 (237)
.....++++++ ++++++++||||.||++|++.||+.+++ +..+..+..|++++++ +.++...|
T Consensus 145 ~~~~~~~~~~~---~~~~~~i~iGDs~nDi~m~~~ag~~va~----na~~~lk~~Ad~vi~~~d~~~vl~~l 209 (210)
T d1j97a_ 145 EILEKIAKIEG---INLEDTVAVGDGANDISMFKKAGLKIAF----CAKPILKEKADICIEKRDLREILKYI 209 (210)
T ss_dssp HHHHHHHHHHT---CCGGGEEEEESSGGGHHHHHHCSEEEEE----SCCHHHHTTCSEEECSSCGGGGGGGC
T ss_pred chhhhHHHHhc---ccccceEEecCCcChHHHHHHCCCCEEE----CCCHHHHHhCCEEEcCCCHHHHHHHh
Confidence 89999999999 9999999999999999999999976443 3344456788999884 45665543
|
| >d1vjra_ c.108.1.14 (A:) Hypothetical protein TM1742 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Hypothetical protein TM1742 species: Thermotoga maritima [TaxId: 2336]
Probab=99.78 E-value=1.2e-19 Score=137.67 Aligned_cols=75 Identities=19% Similarity=0.328 Sum_probs=64.5
Q ss_pred CccCCCCCHHHHHHHHHHcCCCCCCCCcEEEEecCH-HHHHHHHHcCCeEEEEcCCCCCcc----cccchhhhhhhhccc
Q 026543 148 EVKQGKPSPDIFLAAAKRFEGGPIDSQEILVFEDAP-SGVLAAKNAGMSVVMVPDPRLDSS----YHSNADQLLSSLLGF 222 (237)
Q Consensus 148 ~~~~~kp~~~~~~~~l~~~~~~~~~~~~~~~igD~~-~Di~~a~~~G~~~i~v~~~~~~~~----~~~~~~~~~~~~~el 222 (237)
....+||+|..+..+++++| ++|++|+||||+. +||.+|+++|+++|+|.+|..... ....||++++++.||
T Consensus 180 ~~~~~KP~p~~~~~a~~~l~---~~~~~~lmVGD~~~~DI~ga~~aG~~si~V~~G~~~~~~~~~~~~~PD~ii~~l~eL 256 (261)
T d1vjra_ 180 DLIAGKPNPLVVDVISEKFG---VPKERMAMVGDRLYTDVKLGKNAGIVSILVLTGETTPEDLERAETKPDFVFKNLGEL 256 (261)
T ss_dssp SEECSTTSTHHHHHHHHHHT---CCGGGEEEEESCHHHHHHHHHHHTCEEEEESSSSCCHHHHHHCSSCCSEEESSHHHH
T ss_pred ccccCCCcHHHHHHHHhhhc---cCchhcceecCChhHHHHHHHHCCCcEEEECCCCCCHHHHhhcCCCCCEEECCHHHH
Confidence 34568999999999999999 9999999999997 799999999999999998876432 234579999999998
Q ss_pred CCC
Q 026543 223 NPK 225 (237)
Q Consensus 223 ~~~ 225 (237)
...
T Consensus 257 ~~~ 259 (261)
T d1vjra_ 257 AKA 259 (261)
T ss_dssp HHH
T ss_pred HHH
Confidence 544
|
| >d1ltqa1 c.108.1.9 (A:153-301) Polynucleotide kinase, phosphatase domain {Bacteriophage T4 [TaxId: 10665]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: phosphatase domain of polynucleotide kinase domain: Polynucleotide kinase, phosphatase domain species: Bacteriophage T4 [TaxId: 10665]
Probab=99.74 E-value=9.5e-18 Score=116.24 Aligned_cols=105 Identities=10% Similarity=0.029 Sum_probs=74.7
Q ss_pred CCCCccHHHHHHHHHhCCCCEEEEeCChhhHH--HHHHhhhhh-----h-hhhcceeeeCCCCCccCCCCCHHHHHHHHH
Q 026543 93 SELMPGASHLIRHLHAKGIPMCVATGSLARHF--ELKTQKHRE-----L-FSLMHHVVRGDDPEVKQGKPSPDIFLAAAK 164 (237)
Q Consensus 93 ~~~~~~~~~~l~~l~~~g~~v~i~s~~~~~~~--~~~~~~~~g-----l-~~~f~~~~~~~~~~~~~~kp~~~~~~~~l~ 164 (237)
..++|++.++++.|+++|+.++++||...... ....++..+ + ...++...... ....+|+.......+.
T Consensus 35 ~~~~p~v~~~l~~l~~~G~~Iii~T~R~~~~~~~t~~~l~~~~~~~~~~~~~~~~~~~~~~---~~~~~~d~~~k~~~l~ 111 (149)
T d1ltqa1 35 DVINPMVVELSKMYALMGYQIVVVSGRESGTKEDPTKYYRMTRKWVEDIAGVPLVMQCQRE---QGDTRKDDVVKEEIFW 111 (149)
T ss_dssp CCBCHHHHHHHHHHHHTTCEEEEEECSCCCCSSSTTHHHHHHHHHHHHTTCCCCSEEEECC---TTCCSCHHHHHHHHHH
T ss_pred CccCHHHHHHHHHHHhccCeEEEEecCcHHHHHHHHHHHHHHhhhhhhcCCCcEEEeeccc---ccccCCchHHHHHHHH
Confidence 57899999999999999999999999753221 111222111 1 11223333332 3345677788888888
Q ss_pred HcCCCCCCCCc-EEEEecCHHHHHHHHHcCCeEEEEcCCC
Q 026543 165 RFEGGPIDSQE-ILVFEDAPSGVLAAKNAGMSVVMVPDPR 203 (237)
Q Consensus 165 ~~~~~~~~~~~-~~~igD~~~Di~~a~~~G~~~i~v~~~~ 203 (237)
++. .++.+ +++|||+..|+++|+++|++++.|.+|.
T Consensus 112 ~~~---~~~~~i~~~igD~~~dv~a~~~~Gi~~~~V~~Gd 148 (149)
T d1ltqa1 112 KHI---APHFDVKLAIDDRTQVVEMWRRIGVECWQVASGD 148 (149)
T ss_dssp HHT---TTTCEEEEEEECCHHHHHHHHHTTCCEEECSCCC
T ss_pred Hhc---cCCCceEEEEcCCHHHHHHHHHCCCcEEEeCCCC
Confidence 887 66666 4678999999999999999999998874
|
| >d1qyia_ c.108.1.13 (A:) Hypothetical protein MW1667 (SA1546) {Staphylococcus aureus [TaxId: 1280]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Hypothetical protein MW1667 (SA1546) domain: Hypothetical protein MW1667 (SA1546) species: Staphylococcus aureus [TaxId: 1280]
Probab=99.71 E-value=3.9e-18 Score=135.54 Aligned_cols=135 Identities=16% Similarity=0.220 Sum_probs=105.3
Q ss_pred CCCccHHHHHHHHHhCCCCEEEEeCChhhHHHHHHhhhhhhhhhcce--eeeCCC---------CCccCCCCCHHHHHHH
Q 026543 94 ELMPGASHLIRHLHAKGIPMCVATGSLARHFELKTQKHRELFSLMHH--VVRGDD---------PEVKQGKPSPDIFLAA 162 (237)
Q Consensus 94 ~~~~~~~~~l~~l~~~g~~v~i~s~~~~~~~~~~~~~~~gl~~~f~~--~~~~~~---------~~~~~~kp~~~~~~~~ 162 (237)
.+.+++.++|+.|+++|++++++||..... ....++.+|+..+|+. ++++++ ......||+|..+..+
T Consensus 215 ~p~~~v~~~l~~lk~aGi~v~i~Tg~~~~~-a~~il~~lgl~~~F~~~~i~~~~d~~~~~~~~~~~~~~~KP~p~~~~~~ 293 (380)
T d1qyia_ 215 RPVDEVKVLLNDLKGAGFELGIATGRPYTE-TVVPFENLGLLPYFEADFIATASDVLEAENMYPQARPLGKPNPFSYIAA 293 (380)
T ss_dssp SCHHHHHHHHHHHHHTTCEEEEECSSCHHH-HHHHHHHHTCGGGSCGGGEECHHHHHHHHHHSTTSCCCCTTSTHHHHHH
T ss_pred cchhhHHHHHHHHHHCCCeEEEECCCCHHH-HHHHHHHcCCcccCCcceEEecchhhhhhhhccccccccCCChHHHHHH
Confidence 366799999999999999999999966654 4467889999999874 343320 1345789999999988
Q ss_pred HHHcCC-----------CCCCCCcEEEEecCHHHHHHHHHcCCeEEEEcCCCCCc-----ccccchhhhhhhhcccCCCC
Q 026543 163 AKRFEG-----------GPIDSQEILVFEDAPSGVLAAKNAGMSVVMVPDPRLDS-----SYHSNADQLLSSLLGFNPKD 226 (237)
Q Consensus 163 l~~~~~-----------~~~~~~~~~~igD~~~Di~~a~~~G~~~i~v~~~~~~~-----~~~~~~~~~~~~~~el~~~l 226 (237)
+..++. ...+++.|+||||+.||+.+|+++|+.+|+|.+|.... ....+||++++++.|+...+
T Consensus 294 ~~~~~~~~~~k~~iv~~~~~~~~~~~~vGD~~~D~~aak~Ag~~~Igv~~G~~g~~~~~el~~~~AD~ii~~~~el~~il 373 (380)
T d1qyia_ 294 LYGNNRDKYESYINKQDNIVNKDDVFIVGDSLADLLSAQKIGATFIGTLTGLKGKDAAGELEAHHADYVINHLGELRGVL 373 (380)
T ss_dssp HHCCCGGGHHHHHHCCTTCSCTTTEEEEESSHHHHHHHHHHTCEEEEESCBTTBGGGHHHHHHTTCSEEESSGGGHHHHH
T ss_pred HHHcCCCHHHHHHHHHHhCCCCCeEEEECCCHHHHHHHHHCCCCEEEEecCCCCcccHHHHHhCCCCEEECCHHHHHHHH
Confidence 755430 01678999999999999999999999999999987632 23447999999999987665
Q ss_pred CCC
Q 026543 227 WGL 229 (237)
Q Consensus 227 ~~l 229 (237)
..|
T Consensus 374 ~~l 376 (380)
T d1qyia_ 374 DNL 376 (380)
T ss_dssp SCT
T ss_pred HHH
Confidence 443
|
| >d1rkua_ c.108.1.11 (A:) Homoserine kinase ThrH {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Homoserine kinase ThrH domain: Homoserine kinase ThrH species: Pseudomonas aeruginosa [TaxId: 287]
Probab=99.66 E-value=1.4e-17 Score=121.23 Aligned_cols=186 Identities=10% Similarity=0.081 Sum_probs=112.2
Q ss_pred ccEEEEecCcccccchhhHHHHHHHHHHHcCCCCCHHHHHHhcCCCh---HHHHHH---HHHHhCCCCCCCHHHHHHHHH
Q 026543 10 ITHVIFDMDGLLLDTEKFYTEVQELILARYNKTFDWSLKAKMMGKKA---IEAAQV---FVEETGISDKLSAEDFLVQRE 83 (237)
Q Consensus 10 ~~~vifD~DGTL~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~---~~~~~~---~~~~~~~~~~~~~~~~~~~~~ 83 (237)
+|+|+|||||||+++ .|.++++..|+.... ..|++. .+.+.. ++...+.. ...
T Consensus 2 mkli~fDlDGTLl~e------~~~~~a~~~Gi~~~~-----~tgR~~~~~~~~~~~~v~ll~~~~~~----~~~------ 60 (206)
T d1rkua_ 2 MEIACLDLEGVLVPE------IWIAFAEKTGIDALK-----ATTRDIPDYDVLMKQRLRILDEHGLK----LGD------ 60 (206)
T ss_dssp CEEEEEESBTTTBCC------HHHHHHHHHTCGGGG-----CCTTTCCCHHHHHHHHHHHHHHTTCC----HHH------
T ss_pred cEEEEEcCccchHHH------HHHHHHHHcCCHHHH-----HHCCCCCCHHHHHHHHHHHHHhCCCc----eeh------
Confidence 589999999999974 456667778874321 123322 222211 11211211 111
Q ss_pred HHHHhhcCCCCCCccHHHHHHHHHhCCCCEEEEeCChhhHHHHHHhhhhhhhhhcceeeeC--CCCCccCCCCCHHHHHH
Q 026543 84 ETLQTLFPTSELMPGASHLIRHLHAKGIPMCVATGSLARHFELKTQKHRELFSLMHHVVRG--DDPEVKQGKPSPDIFLA 161 (237)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~l~~l~~~g~~v~i~s~~~~~~~~~~~~~~~gl~~~f~~~~~~--~~~~~~~~kp~~~~~~~ 161 (237)
...........++...++..++ .+...+++|.+...... ......+....+...... .........+++.....
T Consensus 61 --~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~s~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 136 (206)
T d1rkua_ 61 --IQEVIATLKPLEGAVEFVDWLR-ERFQVVILSDTFYEFSQ-PLMRQLGFPTLLCHKLEIDDSDRVVGYQLRQKDPKRQ 136 (206)
T ss_dssp --HHHHHTTCCCCTTHHHHHHHHH-TTSEEEEEEEEEHHHHH-HHHHHTTCCCEEEEEEEECTTSCEEEEECCSSSHHHH
T ss_pred --hhhhhhhccccchHHHHHHHhh-cCceEEEeccCchHHHH-HHHHHhCCchhhcceeeeecccccccccccchhhHHH
Confidence 1122245778889888888775 56889999986555433 344444443333222211 10022233455667788
Q ss_pred HHHHcCCCCCCCCcEEEEecCHHHHHHHHHcCCeEEEEcCCCCCcccccchhhh-hhhhcccCCCC
Q 026543 162 AAKRFEGGPIDSQEILVFEDAPSGVLAAKNAGMSVVMVPDPRLDSSYHSNADQL-LSSLLGFNPKD 226 (237)
Q Consensus 162 ~l~~~~~~~~~~~~~~~igD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~-~~~~~el~~~l 226 (237)
.+++++ ++++++++|||+.||++|++.||. +|+++..+...+..++++ ..+.+|+...+
T Consensus 137 ~~~~~~---i~~~eviaiGDg~NDi~Ml~~Ag~---gIAmna~~~v~~~~~~~~~~~~~~d~~~~~ 196 (206)
T d1rkua_ 137 SVIAFK---SLYYRVIAAGDSYNDTTMLSEAHA---GILFHAPENVIREFPQFPAVHTYEDLKREF 196 (206)
T ss_dssp HHHHHH---HTTCEEEEEECSSTTHHHHHHSSE---EEEESCCHHHHHHCTTSCEECSHHHHHHHH
T ss_pred HHHHhc---ccccceEEecCCccCHHHHHhCCc---cEEECCCHHHHHhCCCceeecCHHHHHHHH
Confidence 999999 999999999999999999999994 455533344445566774 46677765544
|
| >d1wr8a_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Pyrococcus horikoshii [TaxId: 53953]
Probab=99.50 E-value=5e-14 Score=103.80 Aligned_cols=64 Identities=19% Similarity=0.091 Sum_probs=52.9
Q ss_pred ccCCCCCHHHHHHHHHHcCCCCCCCCcEEEEecCHHHHHHHHHcCCeEEEEcCCCCCcccccchhhhhhh
Q 026543 149 VKQGKPSPDIFLAAAKRFEGGPIDSQEILVFEDAPSGVLAAKNAGMSVVMVPDPRLDSSYHSNADQLLSS 218 (237)
Q Consensus 149 ~~~~kp~~~~~~~~l~~~~~~~~~~~~~~~igD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~~ 218 (237)
...+.+++.++..++++++ ++++++++|||+.||++|++.+| ..|..++..+..+..|++++++
T Consensus 147 ~~~~~~K~~al~~l~~~~~---i~~~~~~~iGD~~NDi~ml~~ag---~~vav~na~~~~k~~A~~v~~~ 210 (230)
T d1wr8a_ 147 KKPWINKGSGIEKASEFLG---IKPKEVAHVGDGENDLDAFKVVG---YKVAVAQAPKILKENADYVTKK 210 (230)
T ss_dssp ECTTCCHHHHHHHHHHHHT---SCGGGEEEEECSGGGHHHHHHSS---EEEECTTSCHHHHTTCSEECSS
T ss_pred eeCCcCcchhhcccccccc---cchhheeeeecCccHHHHHHHCC---eEEEECCCCHHHHHhCCEEECC
Confidence 3456788999999999999 99999999999999999999999 4555566666666677777654
|
| >d1l6ra_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=99.49 E-value=1.8e-14 Score=106.19 Aligned_cols=61 Identities=11% Similarity=0.076 Sum_probs=49.2
Q ss_pred CCCCHHHHHHHHHHcCCCCCCCCcEEEEecCHHHHHHHHHcCCeEEEEcCCCCCcccccchhhhhhh
Q 026543 152 GKPSPDIFLAAAKRFEGGPIDSQEILVFEDAPSGVLAAKNAGMSVVMVPDPRLDSSYHSNADQLLSS 218 (237)
Q Consensus 152 ~kp~~~~~~~~l~~~~~~~~~~~~~~~igD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~~ 218 (237)
...+..+++++++++| ++++++++|||+.||+.|++.+| ..|+.++..+..+..+++++++
T Consensus 149 ~~~K~~ai~~l~~~~~---i~~~~v~~~GDs~nD~~m~~~a~---~~vav~na~~~~k~~ad~v~~~ 209 (225)
T d1l6ra_ 149 GEDKAFAVNKLKEMYS---LEYDEILVIGDSNNDMPMFQLPV---RKACPANATDNIKAVSDFVSDY 209 (225)
T ss_dssp TCSHHHHHHHHHHHTT---CCGGGEEEECCSGGGHHHHTSSS---EEEECTTSCHHHHHHCSEECSC
T ss_pred ccchHHHHHHHhhhhc---cchhheeeecCCcchHHHHHHCC---eEEEECCCcHHHHHhCCEEECC
Confidence 3456888999999999 99999999999999999999999 4555666655556667766544
|
| >d1rkqa_ c.108.1.10 (A:) Hypothetical protein YidA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YidA species: Escherichia coli [TaxId: 562]
Probab=99.44 E-value=1.9e-13 Score=103.33 Aligned_cols=61 Identities=21% Similarity=0.143 Sum_probs=51.0
Q ss_pred CCHHHHHHHHHHcCCCCCCCCcEEEEecCHHHHHHHHHcCCeEEEEcCCCCCcccccchhhhhhhhc
Q 026543 154 PSPDIFLAAAKRFEGGPIDSQEILVFEDAPSGVLAAKNAGMSVVMVPDPRLDSSYHSNADQLLSSLL 220 (237)
Q Consensus 154 p~~~~~~~~l~~~~~~~~~~~~~~~igD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~~~~ 220 (237)
.|..+++.++++++ ++++++++|||+.||++|.+.+| ..|..+++.+..+..+++++++..
T Consensus 197 ~K~~al~~l~~~~~---i~~~~ii~~GD~~ND~~ml~~~~---~~~am~na~~~lk~~a~~i~~~~~ 257 (271)
T d1rkqa_ 197 NKGTGVKSLADVLG---IKPEEIMAIGDQENDIAMIEYAG---VGVAVDNAIPSVKEVANFVTKSNL 257 (271)
T ss_dssp SHHHHHHHHHHHHT---CCGGGEEEEECSGGGHHHHHHSS---EEEECTTSCHHHHHHCSEECCCTT
T ss_pred Ccccccceehhhcc---cchhcEEEEeCcHhHHHHHHhCC---cEEEeCCCCHHHHHhCCEEcCCCC
Confidence 46788999999999 99999999999999999999999 666667776666777777766544
|
| >d1nf2a_ c.108.1.10 (A:) Hypothetical protein TM0651 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein TM0651 species: Thermotoga maritima [TaxId: 2336]
Probab=99.40 E-value=1.9e-14 Score=108.88 Aligned_cols=65 Identities=15% Similarity=0.163 Sum_probs=54.8
Q ss_pred CCCCCHHHHHHHHHHcCCCCCCCCcEEEEecCHHHHHHHHHcCCeEEEEcCCCCCcccccchhhhhhhhcc
Q 026543 151 QGKPSPDIFLAAAKRFEGGPIDSQEILVFEDAPSGVLAAKNAGMSVVMVPDPRLDSSYHSNADQLLSSLLG 221 (237)
Q Consensus 151 ~~kp~~~~~~~~l~~~~~~~~~~~~~~~igD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~~~~e 221 (237)
.+..|..++++++++++ ++++++++|||+.||++|.+.+| +.|..+++.+..+..|++++.+..|
T Consensus 187 ~~~~K~~ai~~l~~~~~---i~~~~vva~GD~~ND~~ml~~~~---~sva~~na~~~~k~~A~~i~~~~~~ 251 (267)
T d1nf2a_ 187 KNVDKGKALRFLRERMN---WKKEEIVVFGDNENDLFMFEEAG---LRVAMENAIEKVKEASDIVTLTNND 251 (267)
T ss_dssp TTCCHHHHHHHHHHHHT---CCGGGEEEEECSHHHHHHHTTCS---EEEECTTSCHHHHHHCSEECCCTTT
T ss_pred CCCchhHHHHHHHHhhc---cCcccEEEEcCCcchHHHHHhCC---cEEEeCCCCHHHHHhCCEEcCCCCc
Confidence 34456899999999999 99999999999999999999999 5677777777777888887766554
|
| >d1nrwa_ c.108.1.10 (A:) Hypothetical protein YwpJ {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YwpJ species: Bacillus subtilis [TaxId: 1423]
Probab=99.39 E-value=3.5e-14 Score=108.20 Aligned_cols=62 Identities=18% Similarity=0.067 Sum_probs=52.6
Q ss_pred CCCHHHHHHHHHHcCCCCCCCCcEEEEecCHHHHHHHHHcCCeEEEEcCCCCCcccccchhhhhhhhc
Q 026543 153 KPSPDIFLAAAKRFEGGPIDSQEILVFEDAPSGVLAAKNAGMSVVMVPDPRLDSSYHSNADQLLSSLL 220 (237)
Q Consensus 153 kp~~~~~~~~l~~~~~~~~~~~~~~~igD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~~~~ 220 (237)
-.|..+++++++++| ++++++++|||+.||++|++.+| ..|..+++.+..+..|++++++..
T Consensus 212 ~~K~~ai~~l~~~~g---i~~~~vi~~GD~~ND~~Ml~~a~---~svam~na~~~~k~~A~~v~~~~~ 273 (285)
T d1nrwa_ 212 ASKGQALKRLAKQLN---IPLEETAAVGDSLNDKSMLEAAG---KGVAMGNAREDIKSIADAVTLTND 273 (285)
T ss_dssp CSHHHHHHHHHHHTT---CCGGGEEEEESSGGGHHHHHHSS---EEEECTTCCHHHHHHCSEECCCGG
T ss_pred chhhhHHHHHHhhcc---cCcccEEEEeCCHHHHHHHHhCC---eEEEeCCCCHHHHHhCCEEcCCCC
Confidence 356899999999999 99999999999999999999999 666777777666777777776543
|
| >d1rlma_ c.108.1.10 (A:) Sugar phosphatase SupH (YbiV) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sugar phosphatase SupH (YbiV) species: Escherichia coli [TaxId: 562]
Probab=99.36 E-value=4e-13 Score=101.41 Aligned_cols=62 Identities=11% Similarity=0.023 Sum_probs=52.8
Q ss_pred CCCHHHHHHHHHHcCCCCCCCCcEEEEecCHHHHHHHHHcCCeEEEEcCCCCCcccccchhhhhhhhc
Q 026543 153 KPSPDIFLAAAKRFEGGPIDSQEILVFEDAPSGVLAAKNAGMSVVMVPDPRLDSSYHSNADQLLSSLL 220 (237)
Q Consensus 153 kp~~~~~~~~l~~~~~~~~~~~~~~~igD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~~~~ 220 (237)
-.|..+++++++++| ++++++++|||+.||++|.+.+| .+|..+++.+..+..|++++.+..
T Consensus 189 ~sK~~al~~l~~~lg---i~~~~vi~~GD~~ND~~Ml~~ag---~~vam~Na~~~lk~~A~~v~~~~~ 250 (269)
T d1rlma_ 189 LHKANGISRLLKRWD---LSPQNVVAIGDSGNDAEMLKMAR---YSFAMGNAAENIKQIARYATDDNN 250 (269)
T ss_dssp CSHHHHHHHHHHHHT---CCGGGEEEEECSGGGHHHHHHCS---EEEECTTCCHHHHHHCSEECCCGG
T ss_pred hHHHHHHHHHhhhhc---cccccEEEEcCCcchHHHHHhCC---eEEEeCCCCHHHHHhCCEEcCCCC
Confidence 346889999999999 99999999999999999999999 667777777666777787776644
|
| >d2b82a1 c.108.1.12 (A:4-212) Class B acid phosphatase, AphA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Class B acid phosphatase, AphA domain: Class B acid phosphatase, AphA species: Escherichia coli [TaxId: 562]
Probab=99.33 E-value=2.4e-12 Score=91.67 Aligned_cols=98 Identities=15% Similarity=0.150 Sum_probs=69.0
Q ss_pred CCCCccHHHHHHHHHhCCCCEEEEeCChhhH---HHHHHhhhhhhh--hhcceeeeCCCCCccCCCCCHHHHHHHHHHcC
Q 026543 93 SELMPGASHLIRHLHAKGIPMCVATGSLARH---FELKTQKHRELF--SLMHHVVRGDDPEVKQGKPSPDIFLAAAKRFE 167 (237)
Q Consensus 93 ~~~~~~~~~~l~~l~~~g~~v~i~s~~~~~~---~~~~~~~~~gl~--~~f~~~~~~~~~~~~~~kp~~~~~~~~l~~~~ 167 (237)
..+.||+.++++.++++|++|+.+||+.... ....+.+.+|+. ...+.++.++ . ..|. ..+..+++++
T Consensus 85 A~p~pga~~fl~~~~~~Gv~IfyVTnR~~~~~e~T~~nL~K~lG~p~~~~~~vll~~~--~--~~K~---~rr~~Ik~y~ 157 (209)
T d2b82a1 85 SIPKEVARQLIDMHVRRGDAIFFVTGRSPTKTETVSKTLADNFHIPATNMNPVIFAGD--K--PGQN---TKSQWLQDKN 157 (209)
T ss_dssp CEECHHHHHHHHHHHHHTCEEEEEECSCCCSSCCHHHHHHHHTTCCTTTBCCCEECCC--C--TTCC---CSHHHHHHTT
T ss_pred cCcchhHHHHHHHHHHcCCeEEEEeCCchhhHHHHHHHHHHHcCCCcccccceEeeCC--C--CCch---HHHHHHHHcC
Confidence 4578899999999999999999999976433 333333445653 2223444443 2 1222 2344557788
Q ss_pred CCCCCCCcEEEEecCHHHHHHHHHcCCeEEEEcCCCC
Q 026543 168 GGPIDSQEILVFEDAPSGVLAAKNAGMSVVMVPDPRL 204 (237)
Q Consensus 168 ~~~~~~~~~~~igD~~~Di~~a~~~G~~~i~v~~~~~ 204 (237)
+ ++++||..+|+.+|..+|+.+|-|-...+
T Consensus 158 ---I----~l~~GD~l~Df~aA~eagi~~iRi~r~~~ 187 (209)
T d2b82a1 158 ---I----RIFYGDSDNDITAARDVGARGIRILRASN 187 (209)
T ss_dssp ---E----EEEEESSHHHHHHHHHTTCEEEECCCCTT
T ss_pred ---e----EEEecCCHHHHhHHHHcCCCceEeeccCC
Confidence 5 79999999999999999999999865443
|
| >d2rbka1 c.108.1.10 (A:2-261) Sugar-phosphate phosphatase BT4131 {Bacteroides thetaiotaomicron [TaxId: 818]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sugar-phosphate phosphatase BT4131 species: Bacteroides thetaiotaomicron [TaxId: 818]
Probab=99.17 E-value=8.7e-13 Score=99.13 Aligned_cols=63 Identities=16% Similarity=0.244 Sum_probs=51.2
Q ss_pred CCCCCHHHHHHHHHHcCCCCCCCCcEEEEecCHHHHHHHHHcCCeEEEEcCCCCCcccccchhhhhhhh
Q 026543 151 QGKPSPDIFLAAAKRFEGGPIDSQEILVFEDAPSGVLAAKNAGMSVVMVPDPRLDSSYHSNADQLLSSL 219 (237)
Q Consensus 151 ~~kp~~~~~~~~l~~~~~~~~~~~~~~~igD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~~~ 219 (237)
.+..|..+++++++++| ++++++++|||+.||++|.+.+| ..|..+++.+..+..|++++.+.
T Consensus 183 ~~~sK~~al~~l~~~~~---i~~~~~~a~GD~~ND~~Ml~~a~---~svav~na~~~lk~~A~~vt~~~ 245 (260)
T d2rbka1 183 KGDTKQKGIDEIIRHFG---IKLEETMSFGDGGNDISMLRHAA---IGVAMGQAKEDVKAAADYVTAPI 245 (260)
T ss_dssp TTCSHHHHHHHHHHHHT---CCGGGEEEEECSGGGHHHHHHSS---EEEECTTSCHHHHHHSSEECCCG
T ss_pred CCCCHHHHHHHHHHhcc---ccHhheeEecCCcccHHHHHhCC---eEEEeCCCCHHHHHhCCEEeCCC
Confidence 34557889999999999 99999999999999999999999 45566666666666777666553
|
| >d2b30a1 c.108.1.10 (A:18-300) PFL1270w orthologue {Plasmodium vivax [TaxId: 5855]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: PFL1270w orthologue species: Plasmodium vivax [TaxId: 5855]
Probab=99.16 E-value=6.2e-11 Score=89.59 Aligned_cols=62 Identities=19% Similarity=0.169 Sum_probs=50.7
Q ss_pred CCCCCHHHHHHHHHHcCCCCCCCCcEEEEecCHHHHHHHHHcCCeEEEEcCCCCCcccccchhhhhhh
Q 026543 151 QGKPSPDIFLAAAKRFEGGPIDSQEILVFEDAPSGVLAAKNAGMSVVMVPDPRLDSSYHSNADQLLSS 218 (237)
Q Consensus 151 ~~kp~~~~~~~~l~~~~~~~~~~~~~~~igD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~~ 218 (237)
.+..+..++..++++++ ++++++++|||+.||++|.+.+| ..|..+++.+..+..+++++.+
T Consensus 204 ~~~~K~~~l~~l~~~~~---i~~~~vi~~GD~~ND~~Ml~~a~---~~va~~na~~~~k~~a~~v~~~ 265 (283)
T d2b30a1 204 LGHDKYTGINYLLKHYN---ISNDQVLVVGDAENDIAMLSNFK---YSFAVANATDSAKSHAKCVLPV 265 (283)
T ss_dssp TTCCHHHHHHHHHHHTT---CCGGGEEEEECSGGGHHHHHSCS---EEEECTTCCHHHHHHSSEECSS
T ss_pred CcchhHHHHHHHhhhcc---cccceEEEecCChhhHHHHHhCC---cEEEeCCCCHHHHHhCCEEECC
Confidence 34556889999999999 99999999999999999999999 4556667766666667776643
|
| >d1xvia_ c.108.1.10 (A:) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) species: Escherichia coli [TaxId: 562]
Probab=99.11 E-value=4.7e-10 Score=81.99 Aligned_cols=41 Identities=7% Similarity=-0.030 Sum_probs=33.5
Q ss_pred CCCCHHHHHHHHH---HcCCCCCCCCcEEEEecCHHHHHHHHHcCCe
Q 026543 152 GKPSPDIFLAAAK---RFEGGPIDSQEILVFEDAPSGVLAAKNAGMS 195 (237)
Q Consensus 152 ~kp~~~~~~~~l~---~~~~~~~~~~~~~~igD~~~Di~~a~~~G~~ 195 (237)
...+..+.+.+++ ++| ++++++++|||+.||++|.+.+|..
T Consensus 182 ~~~K~~~~~~l~~~~~~l~---i~~~~~iafGD~~NDl~Ml~~a~~~ 225 (232)
T d1xvia_ 182 SAGKDQAANWIIATYQQLS---GKRPTTLGLGDGPNDAPLLEVMDYA 225 (232)
T ss_dssp TCCHHHHHHHHHHHHHHHH---SSCCEEEEEESSGGGHHHHHTSSEE
T ss_pred CchHHHHHHHHHHHHHHcC---CChhcEEEEcCCHhHHHHHHhCCeE
Confidence 3455666666665 568 9999999999999999999999953
|
| >d2bdua1 c.108.1.21 (A:7-297) Cytosolic 5'-nucleotidase III {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Pyrimidine 5'-nucleotidase (UMPH-1) domain: Cytosolic 5'-nucleotidase III species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.11 E-value=9.7e-11 Score=88.42 Aligned_cols=100 Identities=17% Similarity=0.264 Sum_probs=63.0
Q ss_pred CCCCCccHHHHHHHHHhCCCCEEEEeCChhhHHHHHHhhhhhhhhhcceeeeC-----CCC-------CccCCCCCHHHH
Q 026543 92 TSELMPGASHLIRHLHAKGIPMCVATGSLARHFELKTQKHRELFSLMHHVVRG-----DDP-------EVKQGKPSPDIF 159 (237)
Q Consensus 92 ~~~~~~~~~~~l~~l~~~g~~v~i~s~~~~~~~~~~~~~~~gl~~~f~~~~~~-----~~~-------~~~~~kp~~~~~ 159 (237)
.+.+.+|+.++++.|+++|++++|+|+|....+. .+++.+|+...--.+++- ++. ......-+....
T Consensus 133 ~i~Lr~G~~e~~~~l~~~~i~~~IvSgG~~~~ie-~vl~~lg~~~~ni~I~sN~l~f~~~~~~~~~~~~~i~~~~K~~~~ 211 (291)
T d2bdua1 133 DVMLKEGYENFFGKLQQHGIPVFIFSAGIGDVLE-EVIRQAGVYHSNVKVVSNFMDFDENGVLKGFKGELIHVFNKHDGA 211 (291)
T ss_dssp CCCBCBTHHHHHHHHHHHTCCEEEEEEEEHHHHH-HHHHHTTCCBTTEEEEEECEEECTTSBEEEECSSCCCTTCHHHHH
T ss_pred CCCcccCHHHHHHHHHHcCCeEEEEcCChHHHHH-HHHHHcCCCccCceEEeeEEEEeCCeeEeeccCCccccccCcchh
Confidence 4789999999999999999999999998766444 677777654311123321 100 111111122233
Q ss_pred HHHHHHcCCCCCCCCcEEEEecCHHHHHHHHHcC
Q 026543 160 LAAAKRFEGGPIDSQEILVFEDAPSGVLAAKNAG 193 (237)
Q Consensus 160 ~~~l~~~~~~~~~~~~~~~igD~~~Di~~a~~~G 193 (237)
......+.. .-..++++++|||.+|+.||..+.
T Consensus 212 ~~~~~~~~~-~~~~~~vI~iGDs~~Dl~Ma~g~~ 244 (291)
T d2bdua1 212 LKNTDYFSQ-LKDNSNIILLGDSQGDLRMADGVA 244 (291)
T ss_dssp HTTHHHHHH-TTTCCEEEEEESSSGGGGTTTTCS
T ss_pred hhhHHHHhc-cCCcCcEEEEeCCHhHHHHHhCCc
Confidence 333232220 035688999999999999998764
|
| >d1wzca1 c.108.1.10 (A:1-243) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=99.09 E-value=7e-10 Score=81.73 Aligned_cols=63 Identities=6% Similarity=-0.017 Sum_probs=46.2
Q ss_pred CCCCCHHHHHHHHHHcCCCCCCCCcEEEEecCHHHHHHHHHcCCeEEEEcCCCCCcccccchhhhhhh
Q 026543 151 QGKPSPDIFLAAAKRFEGGPIDSQEILVFEDAPSGVLAAKNAGMSVVMVPDPRLDSSYHSNADQLLSS 218 (237)
Q Consensus 151 ~~kp~~~~~~~~l~~~~~~~~~~~~~~~igD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~~ 218 (237)
.+-.+..++..++++++. +.++++++|||+.||++|.+.+| ..|..++..+.....++.+.+.
T Consensus 176 ~~~~K~~al~~l~~~~~~--~~~~~~~a~GD~~ND~~Ml~~a~---~~va~~Na~~~~~~~~~~i~~~ 238 (243)
T d1wzca1 176 GNSDKGKAAKILLDFYKR--LGQIESYAVGDSYNDFPMFEVVD---KVFIVGSLKHKKAQNVSSIIDV 238 (243)
T ss_dssp CSCCHHHHHHHHHHHHHT--TSCEEEEEEECSGGGHHHHTTSS---EEEEESSCCCTTCEEESCHHHH
T ss_pred hhhccHHHHHHHHHHhcC--CCcccEEEEcCCHhHHHHHHcCC---cEEEeCCCChHHHhhhhHHHHH
Confidence 344568889999999831 78899999999999999999999 4444455544445555555443
|
| >d1yj5a1 c.108.1.9 (A:144-338) 5' polynucleotide kinase-3' phosphatase, middle domain {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: phosphatase domain of polynucleotide kinase domain: 5' polynucleotide kinase-3' phosphatase, middle domain species: Mouse (Mus musculus) [TaxId: 10090]
Probab=98.91 E-value=3.4e-09 Score=74.96 Aligned_cols=99 Identities=19% Similarity=0.280 Sum_probs=73.4
Q ss_pred CCccHHHHHHHHHhCCCCEEEEeCChh--------hHH---HHHHhhhhhhhhhcceeeeCCCCCccCCCCCHHHHHHHH
Q 026543 95 LMPGASHLIRHLHAKGIPMCVATGSLA--------RHF---ELKTQKHRELFSLMHHVVRGDDPEVKQGKPSPDIFLAAA 163 (237)
Q Consensus 95 ~~~~~~~~l~~l~~~g~~v~i~s~~~~--------~~~---~~~~~~~~gl~~~f~~~~~~~~~~~~~~kp~~~~~~~~l 163 (237)
+.|++.+.|+.|.++|+.++|+||-.. +.+ ...+++.++. .+...++.. .....||++.++..++
T Consensus 51 l~~~v~~~i~~L~~~gy~iiIvTNQ~gI~rg~~s~~~~~~~~~~i~~~l~~--~~~i~~~~~--~~~~RKP~~GM~~~~~ 126 (195)
T d1yj5a1 51 LYPEIPKKLQELAAEGYKLVIFTNQMGIGRGKLPAEVFKGKVEAVLEKLGV--PFQVLVATH--AGLNRKPVSGMWDHLQ 126 (195)
T ss_dssp SCTTHHHHHHHHHHHTCEEEEEEECHHHHHTSSCHHHHHHHHHHHHHHHTS--CCEEEEECS--SSSSSTTSTHHHHHHH
T ss_pred ccCCHHHHHHHHHhCCcEEEEecCcchhccCCcCHHHHHHHHHHHHHHcCC--CccEEEecC--ccccCCCccHHHHHHH
Confidence 479999999999999999999999321 111 1223333332 234555555 5668999999999999
Q ss_pred HHcCCC-CCCCCcEEEEecC-----------------HHHHHHHHHcCCeEE
Q 026543 164 KRFEGG-PIDSQEILVFEDA-----------------PSGVLAAKNAGMSVV 197 (237)
Q Consensus 164 ~~~~~~-~~~~~~~~~igD~-----------------~~Di~~a~~~G~~~i 197 (237)
++++.. .++.++++||||. ..|++.|.++|++..
T Consensus 127 ~~~n~~~~id~~~S~~IGD~~gr~~~~~~~~~~~D~S~sD~~fA~N~gikF~ 178 (195)
T d1yj5a1 127 EQANEGIPISVEDSVFVGDAAGRLANWAPGRKKKDFSCADRLFALNVGLPFA 178 (195)
T ss_dssp HTSSSSCCCCGGGCEEECSCCCBCTTSBTTBCSCCSCCHHHHHHHHHTCCEE
T ss_pred HHhcccccCCcCceEEEeCccCccccccccccccCcchhHHHHHHHCCCccc
Confidence 997521 1788999999994 499999999998854
|
| >d2bdea1 c.108.1.23 (A:2-459) Cytosolic IMP-GMP specific 5'-nucleotidase {Legionella pneumophila [TaxId: 446]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: 5' nucleotidase-like domain: Cytosolic IMP-GMP specific 5'-nucleotidase species: Legionella pneumophila [TaxId: 446]
Probab=98.90 E-value=4.3e-08 Score=77.41 Aligned_cols=108 Identities=16% Similarity=0.107 Sum_probs=78.2
Q ss_pred CCCCccHHHHHHHHHhCCCCEEEEeCChhhHHHHHHhhhh--------hhhhhcceeeeCC---------------CCCc
Q 026543 93 SELMPGASHLIRHLHAKGIPMCVATGSLARHFELKTQKHR--------ELFSLMHHVVRGD---------------DPEV 149 (237)
Q Consensus 93 ~~~~~~~~~~l~~l~~~g~~v~i~s~~~~~~~~~~~~~~~--------gl~~~f~~~~~~~---------------~~~~ 149 (237)
+...|.+...|..|+++|.++.++||+....+...+--.+ .+.++||.|+... +++.
T Consensus 184 v~k~~~l~~~L~~lr~~GKklFLiTNS~~~y~~~~m~y~~~~~~~~g~dWr~lFDvVIv~A~KP~FF~~~~~~~~v~~~~ 263 (458)
T d2bdea1 184 VIREKEVVEGLKHFIRYGKKIFILTNSEYSYSKLLLDYALSPFLDKGEHWQGLFEFVITLANKPRFFYDNLRFLSVNPEN 263 (458)
T ss_dssp EECCHHHHHHHHHHHTTTCEEEEECSSCHHHHHHHHHHHHGGGSCTTCCGGGTEEEEEESCCHHHHHHSCCCEEEECTTT
T ss_pred hcCChhHHHHHHHHHHcCCeEEEEecCcHHHHHHHhhhhcccCCCCCCChHHhceEEEeCCCCCCccCCCCcceEEeCCC
Confidence 4568889999999999999999999988877654322223 4778999998653 0010
Q ss_pred c-------CCCC---CHHHHHHHHHHcCCCCCCCCcEEEEecCH-HHHHHHH-HcCCeEEEEcCCC
Q 026543 150 K-------QGKP---SPDIFLAAAKRFEGGPIDSQEILVFEDAP-SGVLAAK-NAGMSVVMVPDPR 203 (237)
Q Consensus 150 ~-------~~kp---~~~~~~~~l~~~~~~~~~~~~~~~igD~~-~Di~~a~-~~G~~~i~v~~~~ 203 (237)
+ ..++ .......+.+.+| ....+++||||+. .||...+ ..||.|+.|....
T Consensus 264 g~l~~~~~~~~~~vY~gGn~~~l~~llg---~~g~~VLY~GDhi~~Di~~~kk~~gWrT~~Ii~EL 326 (458)
T d2bdea1 264 GTMTNVHGPIVPGVYQGGNAKKFTEDLG---VGGDEILYIGDHIYGDILRLKKDCNWRTALVVEEL 326 (458)
T ss_dssp CCEEECCSCCCSEEEEECCHHHHHHHTT---CCGGGEEEEESSCCSCHHHHHHHHCSEEEEECTTH
T ss_pred CccccCCccccCCccccCCHHHHHHHhC---CCCCcEEEECCccchhhhhhhhhcCCceEEehHHH
Confidence 0 0011 0122566778888 8999999999999 9987775 5799999997654
|
| >d1q92a_ c.108.1.8 (A:) 5'(3')-deoxyribonucleotidase (dNT-2) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: 5'(3')-deoxyribonucleotidase (dNT-2) domain: 5'(3')-deoxyribonucleotidase (dNT-2) species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.88 E-value=4.5e-09 Score=74.99 Aligned_cols=110 Identities=15% Similarity=0.094 Sum_probs=68.9
Q ss_pred hcCCCCCCccHHHHHHHHHhCC-CCEEEEeCChhhH-----HHHHHhhhh-hhhhhcceeeeCCCCCccCCCCCHHHHHH
Q 026543 89 LFPTSELMPGASHLIRHLHAKG-IPMCVATGSLARH-----FELKTQKHR-ELFSLMHHVVRGDDPEVKQGKPSPDIFLA 161 (237)
Q Consensus 89 ~~~~~~~~~~~~~~l~~l~~~g-~~v~i~s~~~~~~-----~~~~~~~~~-gl~~~f~~~~~~~~~~~~~~kp~~~~~~~ 161 (237)
++..++++||+.++++.|++.+ +.+.++|...... -...+++.. +-......+++++ |
T Consensus 69 ff~~L~p~~gA~e~l~~L~~~~~~~v~i~t~~~~~~~~~~~~k~~Wl~~~~~~~~~~~~~~t~~-------K-------- 133 (195)
T d1q92a_ 69 FFFELEPLPGAVEAVKEMASLQNTDVFICTSPIKMFKYCPYEKYAWVEKYFGPDFLEQIVLTRD-------K-------- 133 (195)
T ss_dssp TTTTCCBCTTHHHHHHHHHHSTTEEEEEEECCCSCCSSHHHHHHHHHHHHHCGGGGGGEEECSC-------S--------
T ss_pred HHhhCCcccCHHHHHHHHhhccCccceEEccccccCcchHHHHHHHHHHhcCCCCccEEEEccc-------c--------
Confidence 3567899999999999999865 4688888754321 122334432 2111122333332 2
Q ss_pred HHHHcCCCCCCCCcEEEEecCHHHHHHHHHcCCeEEEEcCCCCCcccccchhhhhhhhccc
Q 026543 162 AAKRFEGGPIDSQEILVFEDAPSGVLAAKNAGMSVVMVPDPRLDSSYHSNADQLLSSLLGF 222 (237)
Q Consensus 162 ~l~~~~~~~~~~~~~~~igD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~~~~el 222 (237)
..+. . -++|+|++..++++..+|+.+|.+..+.+...........+.++.|.
T Consensus 134 --~~~~---~----d~lIDD~p~n~~~~~~~g~~~il~~~~~N~~~~~~~~~~Rv~~W~e~ 185 (195)
T d1q92a_ 134 --TVVS---A----DLLIDDRPDITGAEPTPSWEHVLFTACHNQHLQLQPPRRRLHSWADD 185 (195)
T ss_dssp --TTSC---C----SEEEESCSCCCCSCSSCSSEEEEECCTTTTTCCCCTTCEEECCTTSC
T ss_pred --ceec---C----eEEecCcHHHHHHHhcCCCeEEEECCCcccCCCCCCCceeeCCHHHH
Confidence 0222 2 28999999999999999999999987766433222334556677665
|
| >d2b8ea1 c.108.1.7 (A:416-434,A:548-663) Cation-transporting ATPase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Cation-transporting ATPase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=98.85 E-value=1e-08 Score=68.24 Aligned_cols=103 Identities=16% Similarity=0.126 Sum_probs=69.8
Q ss_pred CCCCccHHHHHHHHHhCCCCEEEEeCChhhHHHHHHhhhhhhhhhcceeeeCCCCCccCCCCCHHHHHHHHHHcCCCCCC
Q 026543 93 SELMPGASHLIRHLHAKGIPMCVATGSLARHFELKTQKHRELFSLMHHVVRGDDPEVKQGKPSPDIFLAAAKRFEGGPID 172 (237)
Q Consensus 93 ~~~~~~~~~~l~~l~~~g~~v~i~s~~~~~~~~~~~~~~~gl~~~f~~~~~~~~~~~~~~kp~~~~~~~~l~~~~~~~~~ 172 (237)
.++.+++.+.++.|++.|++++++|+. .......+.+.+|+. .+++.- .|+-...+.+++. -
T Consensus 20 D~lr~~a~~~I~~L~~~Gi~v~ilTGD-~~~~a~~ia~~lgI~----~v~~~~---------~p~~k~~~v~~~q---~- 81 (135)
T d2b8ea1 20 DTLKESAKPAVQELKRMGIKVGMITGD-NWRSAEAISRELNLD----LVIAEV---------LPHQKSEEVKKLQ---A- 81 (135)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEECSS-CHHHHHHHHHHHTCS----EEECSC---------CHHHHHHHHHHHT---T-
T ss_pred CCCCccHHHHHHHHHHcCCEEEEEcCc-chhhhhHHHhhhhhh----hhcccc---------chhHHHHHHHHHH---c-
Confidence 468999999999999999999999974 444555677877863 333322 2445566667776 3
Q ss_pred CCcEEEEecCHHHHHHHHHcCCeEEEEcCCCCCcccccchhhhh
Q 026543 173 SQEILVFEDAPSGVLAAKNAGMSVVMVPDPRLDSSYHSNADQLL 216 (237)
Q Consensus 173 ~~~~~~igD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~ 216 (237)
...+.|+||+.||..+.+.+++ +++.+.........+|.++
T Consensus 82 ~~~v~~vGDg~nD~~aL~~Adv---gia~~~~~~~~~~aADivl 122 (135)
T d2b8ea1 82 KEVVAFVGDGINDAPALAQADL---GIAVGSGSDVAVESGDIVL 122 (135)
T ss_dssp TSCEEEEECSSSSHHHHHHSSE---EEEECCC--------SEEE
T ss_pred CCEEEEEeCCCCcHHHHHhCCe---eeecCccCHHHHHhCCEEE
Confidence 3689999999999999999994 4444444444455566654
|
| >d1k1ea_ c.108.1.5 (A:) Probable phosphatase YrbI {Haemophilus influenzae, HI1679 [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Probable phosphatase YrbI domain: Probable phosphatase YrbI species: Haemophilus influenzae, HI1679 [TaxId: 727]
Probab=98.84 E-value=7.1e-09 Score=72.46 Aligned_cols=99 Identities=13% Similarity=0.116 Sum_probs=72.6
Q ss_pred HHHHHHhCCCCEEEEeCChhhHHHHHHhhhhhhhhhcceeeeCCCCCccCCCCCHHHHHHHHHHcCCCCCCCCcEEEEec
Q 026543 102 LIRHLHAKGIPMCVATGSLARHFELKTQKHRELFSLMHHVVRGDDPEVKQGKPSPDIFLAAAKRFEGGPIDSQEILVFED 181 (237)
Q Consensus 102 ~l~~l~~~g~~v~i~s~~~~~~~~~~~~~~~gl~~~f~~~~~~~~~~~~~~kp~~~~~~~~l~~~~~~~~~~~~~~~igD 181 (237)
.+..|++.|+.++++|......+... .+.+++ ..++.+ .+++...+..++++++ +++++++||||
T Consensus 40 gi~~l~~~gi~~~iis~~~~~~v~~~-~~~l~~----~~~~~~-------~~~K~~~l~~~~~~~~---i~~~~v~~vGD 104 (177)
T d1k1ea_ 40 GIKMLMDADIQVAVLSGRDSPILRRR-IADLGI----KLFFLG-------KLEKETACFDLMKQAG---VTAEQTAYIGD 104 (177)
T ss_dssp HHHHHHHTTCEEEEEESCCCHHHHHH-HHHHTC----CEEEES-------CSCHHHHHHHHHHHHT---CCGGGEEEEEC
T ss_pred HHHHHhhhcEEEEEecCCchhHHHHH-Hhhhcc----cccccc-------cccHHHHHHHHHHHhc---CCcceeEEecC
Confidence 36778889999999998766655543 333333 233322 2456788999999999 99999999999
Q ss_pred CHHHHHHHHHcCCeEEEEcCCCCCcccccchhhhhhh
Q 026543 182 APSGVLAAKNAGMSVVMVPDPRLDSSYHSNADQLLSS 218 (237)
Q Consensus 182 ~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~~ 218 (237)
..||+++.+.+| +.++++++.+..+..++++..+
T Consensus 105 d~nDl~~l~~~g---~siap~nA~~~vk~~A~~Vt~~ 138 (177)
T d1k1ea_ 105 DSVDLPAFAACG---TSFAVADAPIYVKNAVDHVLST 138 (177)
T ss_dssp SGGGHHHHHHSS---EEEECTTSCHHHHTTSSEECSS
T ss_pred CccHHHHHhhCC---eEEEcCCccHHHHHhCCEEeCC
Confidence 999999999999 5666666655555666655443
|
| >d1s2oa1 c.108.1.10 (A:1-244) Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc 6803 [TaxId: 1148]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sucrose-phosphatase Slr0953 species: Synechocystis sp. pcc 6803 [TaxId: 1148]
Probab=98.83 E-value=7.6e-09 Score=76.31 Aligned_cols=58 Identities=12% Similarity=0.034 Sum_probs=46.5
Q ss_pred CCCCCHHHHHHHHHHcCCCCCCCCcEEEEecCHHHHHHHHHcCCeEEEEcCCCCCcccccchhh
Q 026543 151 QGKPSPDIFLAAAKRFEGGPIDSQEILVFEDAPSGVLAAKNAGMSVVMVPDPRLDSSYHSNADQ 214 (237)
Q Consensus 151 ~~kp~~~~~~~~l~~~~~~~~~~~~~~~igD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~ 214 (237)
.+.-|..+.+.+++++| ++++++++|||+.||++|.+.+| ..|..++..+..+..++.
T Consensus 159 ~~~~K~~a~~~l~~~~g---i~~~~~v~~GD~~ND~~Ml~~~~---~~vav~na~~~lk~~a~~ 216 (244)
T d1s2oa1 159 QRSNKGNATQYLQQHLA---MEPSQTLVCGDSGNDIGLFETSA---RGVIVRNAQPELLHWYDQ 216 (244)
T ss_dssp TTCSHHHHHHHHHHHTT---CCGGGEEEEECSGGGHHHHTSSS---EEEECTTCCHHHHHHHHH
T ss_pred CccchhHHHHHHHHhcc---CChhhEEEEcCCCCCHHHHhhCC---cEEEeCCCCHHHHHHhhc
Confidence 34456889999999999 99999999999999999999999 555666665555555543
|
| >d2amya1 c.108.1.10 (A:4-246) Phosphomannomutase 2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphomannomutase 2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.68 E-value=4.2e-09 Score=77.24 Aligned_cols=31 Identities=13% Similarity=0.000 Sum_probs=24.8
Q ss_pred CCCCcEEEEec----CHHHHHHHHHcCCeEEEEcC
Q 026543 171 IDSQEILVFED----APSGVLAAKNAGMSVVMVPD 201 (237)
Q Consensus 171 ~~~~~~~~igD----~~~Di~~a~~~G~~~i~v~~ 201 (237)
++++++++||| +.||++|.+.+|...+.|..
T Consensus 196 ~~~~ev~afGD~~~~g~NDi~Ml~~~g~~~~~v~~ 230 (243)
T d2amya1 196 DGYKTIYFFGDKTMPGGNDHEIFTDPRTMGYSVTA 230 (243)
T ss_dssp SCCSEEEEEECSCC---CCCHHHHCTTEEEEECSS
T ss_pred CCcceEEEEcCCCCCCCCcHHHHHccCCcEEEeCC
Confidence 78999999999 67999999999965666543
|
| >d2fuea1 c.108.1.10 (A:13-256) Phosphomannomutase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphomannomutase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.66 E-value=7.1e-08 Score=70.35 Aligned_cols=55 Identities=7% Similarity=-0.054 Sum_probs=36.0
Q ss_pred CCCCHHHHHHHHHHcCCCCCCCCcEEEEecCH----HHHHHHHHcCCeEEEEcCCCCCcccccchhh
Q 026543 152 GKPSPDIFLAAAKRFEGGPIDSQEILVFEDAP----SGVLAAKNAGMSVVMVPDPRLDSSYHSNADQ 214 (237)
Q Consensus 152 ~kp~~~~~~~~l~~~~~~~~~~~~~~~igD~~----~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~ 214 (237)
+..|..++++++ + .+++++++|||+. ||++|.+.+|...+.| ++..+..+..+++
T Consensus 183 ~vsKg~al~~L~---~---~~~~ev~afGD~~~~G~ND~eml~~a~~~~~av--~na~~~~k~~~~~ 241 (244)
T d2fuea1 183 GWDKRYCLDSLD---Q---DSFDTIHFFGNETSPGGNDFEIFADPRTVGHSV--VSPQDTVQRCREI 241 (244)
T ss_dssp TCSTTHHHHHHT---T---SCCSEEEEEESCCSTTSTTHHHHHSTTSEEEEC--SSHHHHHHHHHHH
T ss_pred hccHHHHHHHHh---c---CChhhEEEEcCCCCCCCCcHHHHHcCCCcEEEc--CCHHHHHHHHHHh
Confidence 344566666554 4 6789999999975 9999999999644444 4443333333333
|
| >d1u02a_ c.108.1.15 (A:) Trehalose-6-phosphate phosphatase related protein {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Trehalose-phosphatase domain: Trehalose-6-phosphate phosphatase related protein species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=98.65 E-value=9.5e-09 Score=74.68 Aligned_cols=47 Identities=6% Similarity=0.064 Sum_probs=33.1
Q ss_pred CCcEEEEecCHHHHHHHHHcCCeEEEEcCCCCCcccccchhhhhhhhcccCC
Q 026543 173 SQEILVFEDAPSGVLAAKNAGMSVVMVPDPRLDSSYHSNADQLLSSLLGFNP 224 (237)
Q Consensus 173 ~~~~~~igD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~~~~el~~ 224 (237)
.+++++|||+.||+.|.+.+|.. +.|..|.. +..|.+.+++..|+..
T Consensus 170 ~~~~i~~GDs~ND~~Mf~~~~~~-~av~~g~~----~~~A~~~~~~~~ev~~ 216 (229)
T d1u02a_ 170 ERPAIIAGDDATDEAAFEANDDA-LTIKVGEG----ETHAKFHVADYIEMRK 216 (229)
T ss_dssp TSCEEEEESSHHHHHHHHTTTTS-EEEEESSS----CCCCSEEESSHHHHHH
T ss_pred cccceeecCCCChHHHHhccCCe-EEEEeCCC----CccCeEEcCCHHHHHH
Confidence 35789999999999999999754 34444443 3466677666666433
|
| >d1wpga2 c.108.1.7 (A:344-360,A:600-750) Calcium ATPase, catalytic domain P {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Calcium ATPase, catalytic domain P species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=98.60 E-value=3.4e-08 Score=68.31 Aligned_cols=117 Identities=12% Similarity=0.083 Sum_probs=76.0
Q ss_pred CCCCccHHHHHHHHHhCCCCEEEEeCChhhHHHHHHhhhhhhhhhccee----eeCCC--------------CCccCCCC
Q 026543 93 SELMPGASHLIRHLHAKGIPMCVATGSLARHFELKTQKHRELFSLMHHV----VRGDD--------------PEVKQGKP 154 (237)
Q Consensus 93 ~~~~~~~~~~l~~l~~~g~~v~i~s~~~~~~~~~~~~~~~gl~~~f~~~----~~~~~--------------~~~~~~kp 154 (237)
.++.+++.+.++.|++.|++++++|+. .......+.+.+|+...-..+ +.+.. .......-
T Consensus 19 Dp~R~~~~~~I~~l~~~GI~v~miTGD-~~~tA~~ia~~~Gi~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~ 97 (168)
T d1wpga2 19 DPPRKEVMGSIQLCRDAGIRVIMITGD-NKGTAIAICRRIGIFGENEEVADRAYTGREFDDLPLAEQREACRRACCFARV 97 (168)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEECSS-CHHHHHHHHHHTTSSCTTCCCTTTEEEHHHHHHSCHHHHHHHHHHCCEEESC
T ss_pred CCCchhHHHHHHHHHHCcCEEEEECCC-CHHHHHHHHHHcCCCCCccccccccccccccchhhHHHHhhhhhhhhhhhcc
Confidence 468899999999999999999999984 444555677777774322111 11100 00012233
Q ss_pred CHHHHHHHHHHcCCCCCCCCcEEEEecCHHHHHHHHHcCCeEEEEcCCCCCcccccchhhhh
Q 026543 155 SPDIFLAAAKRFEGGPIDSQEILVFEDAPSGVLAAKNAGMSVVMVPDPRLDSSYHSNADQLL 216 (237)
Q Consensus 155 ~~~~~~~~l~~~~~~~~~~~~~~~igD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~ 216 (237)
+|+-...+.+.+. -....+.|+||+.||..+.+.|. ++|..+.........+++++
T Consensus 98 ~p~~K~~lv~~l~---~~g~~Va~vGDG~nD~~AL~~Ad---vGIa~~~gt~~a~~aAdivl 153 (168)
T d1wpga2 98 EPSHKSKIVEYLQ---SYDEITAMTGDGVNDAPALKKAE---IGIAMGSGTAVAKTASEMVL 153 (168)
T ss_dssp CHHHHHHHHHHHH---HTTCCEEEEECSGGGHHHHHHSS---EEEEETTSCHHHHHTCSEEE
T ss_pred chhHHHHHHHHHH---hcccceeEEecCCCCHHHHHhCC---EEEEeccccHHHHHhCCEEE
Confidence 5556666666666 55578999999999999999999 55555544333344455543
|
| >d1xpja_ c.108.1.18 (A:) Hypothetical protein VC0232 {Vibrio cholerae [TaxId: 666]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Hypothetical protein VC0232 domain: Hypothetical protein VC0232 species: Vibrio cholerae [TaxId: 666]
Probab=97.79 E-value=3.3e-05 Score=49.77 Aligned_cols=28 Identities=14% Similarity=0.148 Sum_probs=25.5
Q ss_pred CCCCccHHHHHHHHHhCCCCEEEEeCCh
Q 026543 93 SELMPGASHLIRHLHAKGIPMCVATGSL 120 (237)
Q Consensus 93 ~~~~~~~~~~l~~l~~~g~~v~i~s~~~ 120 (237)
..|.+++.+.+..|++.|+.+.+.|++.
T Consensus 23 ~~P~~~~Ie~l~~l~~~G~~Iii~TaR~ 50 (124)
T d1xpja_ 23 VLPRLDVIEQLREYHQLGFEIVISTARN 50 (124)
T ss_dssp CCBCHHHHHHHHHHHHTTCEEEEEECTT
T ss_pred cCcCHHHHHHHHHHHHCCCEEEEEecCC
Confidence 4689999999999999999999999874
|
| >d2obba1 c.108.1.25 (A:1-122) Hypothetical protein BT0820 {Bacteroides thetaiotaomicron [TaxId: 818]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: BT0820-like domain: Hypothetical protein BT0820 species: Bacteroides thetaiotaomicron [TaxId: 818]
Probab=97.27 E-value=0.00034 Score=44.85 Aligned_cols=31 Identities=13% Similarity=0.070 Sum_probs=26.8
Q ss_pred CCCCccHHHHHHHHHhCCCCEEEEeCChhhH
Q 026543 93 SELMPGASHLIRHLHAKGIPMCVATGSLARH 123 (237)
Q Consensus 93 ~~~~~~~~~~l~~l~~~g~~v~i~s~~~~~~ 123 (237)
.+|.+++.++++.|+++|..+.+.|++....
T Consensus 20 ~kPi~~~Ie~l~~L~~~G~~IIi~TaR~~~~ 50 (122)
T d2obba1 20 GEEIPFAVETLKLLQQEKHRLILWSVREGEL 50 (122)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEECCSCCHHH
T ss_pred ccccHHHHHHHHHHHHCCCeEEEEecCCCcc
Confidence 3588999999999999999999999876543
|
| >d1ta0a_ c.108.1.16 (A:) Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1, NRAMP1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NLI interacting factor-like phosphatase domain: Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1, NRAMP1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.35 E-value=0.00058 Score=47.07 Aligned_cols=92 Identities=10% Similarity=0.190 Sum_probs=63.5
Q ss_pred CCCCccHHHHHHHHHhCCCCEEEEeCChhhHHHHHHhhhhhhhhhcceeeeCCCCCccCCCCCHHHHHHHHHHcCCCCCC
Q 026543 93 SELMPGASHLIRHLHAKGIPMCVATGSLARHFELKTQKHRELFSLMHHVVRGDDPEVKQGKPSPDIFLAAAKRFEGGPID 172 (237)
Q Consensus 93 ~~~~~~~~~~l~~l~~~g~~v~i~s~~~~~~~~~~~~~~~gl~~~f~~~~~~~~~~~~~~kp~~~~~~~~l~~~~~~~~~ 172 (237)
+...||+.++|+.+.+. +.++|.|.+...+.. .+++.+.-...+......+ ...... ..+.+-++.+| -+
T Consensus 54 v~~RP~l~eFL~~l~~~-yei~I~Ta~~~~YA~-~il~~ldp~~~~~~~~~r~--~c~~~~---~~~~KdL~~l~---~~ 123 (181)
T d1ta0a_ 54 VLKRPHVDEFLQRMGEL-FECVLFTASLAKYAD-PVADLLDKWGAFRARLFRE--SCVFHR---GNYVKDLSRLG---RD 123 (181)
T ss_dssp EEECTTHHHHHHHHHHH-SEEEEECSSCHHHHH-HHHHHHCSSCCEEEEECGG--GSEEET---TEEECCGGGSC---SC
T ss_pred EecCCCHHHHHHHHHhc-eEEEEEcCCcHHHHH-HHHHHhccCCceeEEEEee--eeeecC---CcccccHhhcC---CC
Confidence 56899999999999988 999999998877655 5666655445555555444 111111 11234567788 88
Q ss_pred CCcEEEEecCHHHHHHHHHcCC
Q 026543 173 SQEILVFEDAPSGVLAAKNAGM 194 (237)
Q Consensus 173 ~~~~~~igD~~~Di~~a~~~G~ 194 (237)
.+++++|+|++.-...-...|+
T Consensus 124 l~~vvivDd~~~~~~~~~~N~I 145 (181)
T d1ta0a_ 124 LRRVLILDNSPASYVFHPDNAV 145 (181)
T ss_dssp GGGEEEECSCGGGGTTCGGGBC
T ss_pred HHHeEEEcCChhhhhcCccCee
Confidence 9999999999976655444553
|
| >d1y8aa1 c.108.1.24 (A:1-308) Hypothetical protein AF1437 {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: AF1437-like domain: Hypothetical protein AF1437 species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=96.28 E-value=0.1 Score=36.91 Aligned_cols=62 Identities=16% Similarity=0.240 Sum_probs=41.6
Q ss_pred HHHHHHHhCCCCCCCHHHHHHHHHHHHHhhcCCCCCCccHHHHHHHHHhCCCCEEEEeCChhhHHHHHHhhhhhh
Q 026543 60 AQVFVEETGISDKLSAEDFLVQREETLQTLFPTSELMPGASHLIRHLHAKGIPMCVATGSLARHFELKTQKHREL 134 (237)
Q Consensus 60 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~v~i~s~~~~~~~~~~~~~~~gl 134 (237)
+--++..+|+. .+.+.++-+. ...+.||+.++++.+.+. .+.+|+|.+...++ .+++++.|+
T Consensus 58 IvPFl~a~Gvt----~edL~~fSE~-------~~~lvpgA~~~lk~l~~~-m~~yIvSTSY~qyi-~al~~~~gf 119 (308)
T d1y8aa1 58 LTPFLAAAGVK----NRDVERIAEL-------SAKFVPDAEKAMATLQER-WTPVVISTSYTQYL-RRTASMIGV 119 (308)
T ss_dssp HHHHHHHTTCC----HHHHHHHHHH-------HCCBCTTHHHHHHHHHTT-CEEEEEEEEEHHHH-HHHHHHTTC
T ss_pred HHHHHHHhCCC----HHHHHHHhhh-------ceeecCCHHHHHHHHHhh-CCcEEEeccHHHHH-HHHHhhcCC
Confidence 33445555643 4554444433 377999999999999887 88899998555544 456777665
|
| >d1k1ea_ c.108.1.5 (A:) Probable phosphatase YrbI {Haemophilus influenzae, HI1679 [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Probable phosphatase YrbI domain: Probable phosphatase YrbI species: Haemophilus influenzae, HI1679 [TaxId: 727]
Probab=93.86 E-value=0.0081 Score=40.92 Aligned_cols=18 Identities=44% Similarity=0.684 Sum_probs=15.3
Q ss_pred CCccEEEEecCcccccch
Q 026543 8 KPITHVIFDMDGLLLDTE 25 (237)
Q Consensus 8 ~~~~~vifD~DGTL~~~~ 25 (237)
.++|+++||+||||+|..
T Consensus 3 ~~ik~~i~DvDGVlTDG~ 20 (177)
T d1k1ea_ 3 ENIKFVITDVDGVLTDGQ 20 (177)
T ss_dssp GGCCEEEEECTTTTSCSE
T ss_pred ccCeEEEEccCCcccCCe
Confidence 468999999999999743
|
| >d1qyia_ c.108.1.13 (A:) Hypothetical protein MW1667 (SA1546) {Staphylococcus aureus [TaxId: 1280]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Hypothetical protein MW1667 (SA1546) domain: Hypothetical protein MW1667 (SA1546) species: Staphylococcus aureus [TaxId: 1280]
Probab=92.56 E-value=0.043 Score=42.04 Aligned_cols=22 Identities=27% Similarity=0.751 Sum_probs=18.2
Q ss_pred ccEEEEecCcccccchhhHHHH
Q 026543 10 ITHVIFDMDGLLLDTEKFYTEV 31 (237)
Q Consensus 10 ~~~vifD~DGTL~~~~~~~~~~ 31 (237)
+|.|+||+||||++....+...
T Consensus 1 ~~~i~fd~dGVll~~~~~~D~s 22 (380)
T d1qyia_ 1 MKKILFDVDGVFLSEERCFDVS 22 (380)
T ss_dssp CCEEEECSBTTTBCSHHHHHHH
T ss_pred CceEEEeCCcEEEcceeecchH
Confidence 4789999999999988776543
|
| >d1xm3a_ c.1.31.1 (A:) Thiazole biosynthesis protein ThiG {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: ThiG-like family: ThiG-like domain: Thiazole biosynthesis protein ThiG species: Bacillus subtilis [TaxId: 1423]
Probab=89.71 E-value=2.2 Score=29.69 Aligned_cols=97 Identities=13% Similarity=0.148 Sum_probs=66.0
Q ss_pred CCCccHHHHH---HHHHhCCCCEEEEeCChhhHHHHHHhhhhhhhhhcceeeeCCCCCccCCCCCHHHHHHHHHHcCCCC
Q 026543 94 ELMPGASHLI---RHLHAKGIPMCVATGSLARHFELKTQKHRELFSLMHHVVRGDDPEVKQGKPSPDIFLAAAKRFEGGP 170 (237)
Q Consensus 94 ~~~~~~~~~l---~~l~~~g~~v~i~s~~~~~~~~~~~~~~~gl~~~f~~~~~~~~~~~~~~kp~~~~~~~~l~~~~~~~ 170 (237)
.+.|+..+++ +.|-+.|+.|..+++.+.. ...+ +...|.... +-.++. ...+.+-.++..++.++++.+
T Consensus 106 ~L~PD~~etl~Aae~Lv~eGF~VlpY~~~D~v-~ak~-Le~~Gc~av--MPlgsP-IGSg~Gl~n~~~l~~i~~~~~--- 177 (251)
T d1xm3a_ 106 SLLPDPVETLKASEQLLEEGFIVLPYTSDDVV-LARK-LEELGVHAI--MPGASP-IGSGQGILNPLNLSFIIEQAK--- 177 (251)
T ss_dssp TCCBCHHHHHHHHHHHHHTTCCEEEEECSCHH-HHHH-HHHHTCSCB--EECSSS-TTCCCCCSCHHHHHHHHHHCS---
T ss_pred CcCCCHHHHHHHHHHHHhCCcEEEEecCCCHH-HHHH-HHHcCChhH--HHhhhh-hhcCCCcCChHHHHHHHhcCC---
Confidence 3677777766 5667889999999985443 3333 444443221 111221 023456789999999999988
Q ss_pred CCCCcEEEEecC---HHHHHHHHHcCCeEEEEcCC
Q 026543 171 IDSQEILVFEDA---PSGVLAAKNAGMSVVMVPDP 202 (237)
Q Consensus 171 ~~~~~~~~igD~---~~Di~~a~~~G~~~i~v~~~ 202 (237)
++ +.|+-+ ++|...|-+.|+..+++++.
T Consensus 178 vP----vIvDAGIG~pSdAa~AMElG~daVLvNTA 208 (251)
T d1xm3a_ 178 VP----VIVDAGIGSPKDAAYAMELGADGVLLNTA 208 (251)
T ss_dssp SC----BEEESCCCSHHHHHHHHHTTCSEEEESHH
T ss_pred cc----EEEecCCCCHHHHHHHHHccCCEEEechh
Confidence 65 667654 59999999999999999763
|
| >d2pjua1 c.92.3.1 (A:11-196) Propionate catabolism operon regulatory protein PrpR {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Chelatase-like superfamily: PrpR receptor domain-like family: PrpR receptor domain-like domain: Propionate catabolism operon regulatory protein PrpR species: Escherichia coli [TaxId: 562]
Probab=89.02 E-value=0.37 Score=32.59 Aligned_cols=88 Identities=13% Similarity=0.004 Sum_probs=49.8
Q ss_pred cHHHHHHHHHhCCCCEEEEeCChhhHHHHHHhhhhhhhhhcceeeeCCCCCccCCCCCHHHHHHHHHHcCCCCCCCCcEE
Q 026543 98 GASHLIRHLHAKGIPMCVATGSLARHFELKTQKHRELFSLMHHVVRGDDPEVKQGKPSPDIFLAAAKRFEGGPIDSQEIL 177 (237)
Q Consensus 98 ~~~~~l~~l~~~g~~v~i~s~~~~~~~~~~~~~~~gl~~~f~~~~~~~~~~~~~~kp~~~~~~~~l~~~~~~~~~~~~~~ 177 (237)
++...|..+++.+-++++++......-...+.+.+++.- ...... +++-....++++. -+.-+ +
T Consensus 82 Dil~al~~a~~~~~kiavV~~~~~~~~~~~~~~ll~~~i--~~~~~~----------~~~e~~~~v~~l~---~~G~~-v 145 (186)
T d2pjua1 82 DVLQFLAKAGKLTSSIGVVTYQETIPALVAFQKTFNLRL--DQRSYI----------TEEDARGQINELK---ANGTE-A 145 (186)
T ss_dssp HHHHHHHHTTCTTSCEEEEEESSCCHHHHHHHHHHTCCE--EEEEES----------SHHHHHHHHHHHH---HTTCC-E
T ss_pred HHHHHHHHHHHhCCCEEEEeCCccchHHHHHHHHhCCce--EEEEec----------CHHHHHHHHHHHH---HCCCC-E
Confidence 445555555566789999987554443334444444321 111111 1333444444443 22233 5
Q ss_pred EEecCHHHHHHHHHcCCeEEEEcCC
Q 026543 178 VFEDAPSGVLAAKNAGMSVVMVPDP 202 (237)
Q Consensus 178 ~igD~~~Di~~a~~~G~~~i~v~~~ 202 (237)
+|||+.. ...|++.|++.+++.++
T Consensus 146 VVG~~~~-~~~A~~~Gl~~vli~S~ 169 (186)
T d2pjua1 146 VVGAGLI-TDLAEEAGMTGIFIYSA 169 (186)
T ss_dssp EEESHHH-HHHHHHTTSEEEESSCH
T ss_pred EECChHH-HHHHHHcCCCEEEEeCH
Confidence 5999974 37889999999998654
|
| >d1yj5a1 c.108.1.9 (A:144-338) 5' polynucleotide kinase-3' phosphatase, middle domain {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: phosphatase domain of polynucleotide kinase domain: 5' polynucleotide kinase-3' phosphatase, middle domain species: Mouse (Mus musculus) [TaxId: 10090]
Probab=87.13 E-value=0.14 Score=35.08 Aligned_cols=17 Identities=35% Similarity=0.509 Sum_probs=13.9
Q ss_pred CCccEEEEecCcccccc
Q 026543 8 KPITHVIFDMDGLLLDT 24 (237)
Q Consensus 8 ~~~~~vifD~DGTL~~~ 24 (237)
.+-|+++||.||||+..
T Consensus 19 ~~~Kia~fDrDGtLik~ 35 (195)
T d1yj5a1 19 PQGKVAAFDLDGTLITT 35 (195)
T ss_dssp CCSCEEEECSBTTTEEC
T ss_pred CcCcEEEEECCCceEee
Confidence 34589999999999854
|
| >d2c4na1 c.108.1.14 (A:1-250) NagD {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: NagD species: Escherichia coli [TaxId: 562]
Probab=86.43 E-value=0.39 Score=33.88 Aligned_cols=27 Identities=26% Similarity=0.582 Sum_probs=23.6
Q ss_pred CCccHHHHHHHHHhCCCCEEEEeCChh
Q 026543 95 LMPGASHLIRHLHAKGIPMCVATGSLA 121 (237)
Q Consensus 95 ~~~~~~~~l~~l~~~g~~v~i~s~~~~ 121 (237)
+.|++.++++.|+++|++++++||+..
T Consensus 20 ~i~~a~e~i~~l~~~g~~~~~~TN~~~ 46 (250)
T d2c4na1 20 AVPGAAEFLHGIMDKGLPLVLLTNYPS 46 (250)
T ss_dssp ECTTHHHHHHHHHHTTCCEEEEESCCS
T ss_pred cCccHHHHHHHHHHCCCcEEEEeCCCC
Confidence 567889999999999999999998653
|
| >d2nn4a1 a.272.1.1 (A:1-62) Hypothetical protein YqgQ {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: YqgQ-like superfamily: YqgQ-like family: YqgQ-like domain: Hypothetical protein YqgQ species: Bacillus subtilis [TaxId: 1423]
Probab=85.20 E-value=0.13 Score=27.70 Aligned_cols=26 Identities=19% Similarity=0.111 Sum_probs=22.2
Q ss_pred HHHHHHHHcCCCCCCCCcEEEEecCHHHHHHHH
Q 026543 158 IFLAAAKRFEGGPIDSQEILVFEDAPSGVLAAK 190 (237)
Q Consensus 158 ~~~~~l~~~~~~~~~~~~~~~igD~~~Di~~a~ 190 (237)
-.+++++++| -.+++||+..|+++..
T Consensus 6 DVqQLLK~fG-------~~IY~GdR~~DielM~ 31 (62)
T d2nn4a1 6 DVQQLLKTFG-------HIVYFGDRELEIEFML 31 (62)
T ss_dssp HHHHHHHTTT-------CCCCCSCHHHHHHHHH
T ss_pred HHHHHHHHCC-------EeEEeCchHHHHHHHH
Confidence 3678999999 5799999999999865
|
| >d1vjra_ c.108.1.14 (A:) Hypothetical protein TM1742 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Hypothetical protein TM1742 species: Thermotoga maritima [TaxId: 2336]
Probab=84.69 E-value=0.45 Score=33.68 Aligned_cols=49 Identities=16% Similarity=0.207 Sum_probs=32.6
Q ss_pred CCccHHHHHHHHHhCCCCEEEEeCChhhHHH--HHHhhhhhhhhhcceeee
Q 026543 95 LMPGASHLIRHLHAKGIPMCVATGSLARHFE--LKTQKHRELFSLMHHVVR 143 (237)
Q Consensus 95 ~~~~~~~~l~~l~~~g~~v~i~s~~~~~~~~--~~~~~~~gl~~~f~~~~~ 143 (237)
+.|++.++++.|+++|.+++++||+...... ...+..+|+.-..+.+++
T Consensus 24 ~i~~a~e~l~~l~~~g~~~~~~TN~~~~~~~~~~~~~~~~g~~~~~~~v~t 74 (261)
T d1vjra_ 24 LLPGSLEFLETLKEKNKRFVFFTNNSSLGAQDYVRKLRNMGVDVPDDAVVT 74 (261)
T ss_dssp ECTTHHHHHHHHHHTTCEEEEEESCTTSCHHHHHHHHHHTTCCCCGGGEEE
T ss_pred cCchHHHHHHHHHHcCCCEEEEeCCCCCCHHHHHHHHHhhccccccceecc
Confidence 5689999999999999999999986433222 223444555444444443
|
| >d1wvia_ c.108.1.14 (A:) Putative phosphatase SMU.1415c {Streptococcus mutans [TaxId: 1309]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Putative phosphatase SMU.1415c species: Streptococcus mutans [TaxId: 1309]
Probab=84.03 E-value=0.48 Score=33.47 Aligned_cols=27 Identities=15% Similarity=0.481 Sum_probs=23.8
Q ss_pred CCccHHHHHHHHHhCCCCEEEEeCChh
Q 026543 95 LMPGASHLIRHLHAKGIPMCVATGSLA 121 (237)
Q Consensus 95 ~~~~~~~~l~~l~~~g~~v~i~s~~~~ 121 (237)
+.|++.++++.|+++|++++++||+..
T Consensus 19 ~i~~a~e~l~~l~~~g~~~~~~TN~s~ 45 (253)
T d1wvia_ 19 RIPAGEDFVKRLQERQLPYILVTNNTT 45 (253)
T ss_dssp ECHHHHHHHHHHHHHTCCEEEEECCCS
T ss_pred cCccHHHHHHHHHHCCCCEEEEeCCCC
Confidence 578899999999999999999998644
|
| >d1yv9a1 c.108.1.14 (A:4-256) Putative hydrolase EF1188 {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Putative hydrolase EF1188 species: Enterococcus faecalis [TaxId: 1351]
Probab=83.53 E-value=0.54 Score=33.11 Aligned_cols=27 Identities=19% Similarity=0.469 Sum_probs=23.2
Q ss_pred CCccHHHHHHHHHhCCCCEEEEeCChh
Q 026543 95 LMPGASHLIRHLHAKGIPMCVATGSLA 121 (237)
Q Consensus 95 ~~~~~~~~l~~l~~~g~~v~i~s~~~~ 121 (237)
..|++.++++.|+++|++++++||++.
T Consensus 19 ~i~~a~~~i~~l~~~g~~~~~~Tn~s~ 45 (253)
T d1yv9a1 19 PIPAGKRFVERLQEKDLPFLFVTNNTT 45 (253)
T ss_dssp ECHHHHHHHHHHHHTTCCEEEEECCCS
T ss_pred cCccHHHHHHHHHHCCCCEEEEeCCCC
Confidence 457888999999999999999998553
|
| >d1ta0a_ c.108.1.16 (A:) Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1, NRAMP1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NLI interacting factor-like phosphatase domain: Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1, NRAMP1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=82.42 E-value=0.24 Score=33.39 Aligned_cols=17 Identities=24% Similarity=0.409 Sum_probs=14.0
Q ss_pred CccEEEEecCcccccch
Q 026543 9 PITHVIFDMDGLLLDTE 25 (237)
Q Consensus 9 ~~~~vifD~DGTL~~~~ 25 (237)
+-.++++|+|+||+.+.
T Consensus 14 ~k~~LVLDLDeTLihs~ 30 (181)
T d1ta0a_ 14 DKICVVIDLDETLVHSS 30 (181)
T ss_dssp TSCEEEECCBTTTEEEE
T ss_pred CCeEEEEeCCCCEEccc
Confidence 34689999999999754
|
| >d1f6da_ c.87.1.3 (A:) UDP-N-acetylglucosamine 2-epimerase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDP-N-acetylglucosamine 2-epimerase domain: UDP-N-acetylglucosamine 2-epimerase species: Escherichia coli [TaxId: 562]
Probab=81.83 E-value=1.5 Score=33.03 Aligned_cols=52 Identities=13% Similarity=0.131 Sum_probs=34.7
Q ss_pred CCCCcEEEEecCHHHHHHHH---HcCCeEEEEcCCCCCccc-----ccchhhhhhhhccc
Q 026543 171 IDSQEILVFEDAPSGVLAAK---NAGMSVVMVPDPRLDSSY-----HSNADQLLSSLLGF 222 (237)
Q Consensus 171 ~~~~~~~~igD~~~Di~~a~---~~G~~~i~v~~~~~~~~~-----~~~~~~~~~~~~el 222 (237)
..|+=+++.||+..=+.+|. ..+++.+.+..|...... ...--+.++.++++
T Consensus 85 ~kPD~v~v~GDr~e~la~a~aa~~~~ipi~HiegG~~s~~~~~~~pde~~R~~iskls~~ 144 (376)
T d1f6da_ 85 FKPDVVLVHGDTTTTLATSLAAFYQRIPVGHVEAGLRTGDLYSPWPEEANRTLTGHLAMY 144 (376)
T ss_dssp HCCSEEEEETTCHHHHHHHHHHHTTTCCEEEESCCCCCSCTTSSTTHHHHHHHHHHTCSE
T ss_pred ccCcceeeeccccchhhHHHHHHhhCceEEEEecccccccccccCchhhhhhhhccceeE
Confidence 34889999999986665554 458999999887664332 33334555556554
|