Citrus Sinensis ID: 026565

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------
Protein Sequence
MEAISMITRPFHFSLKFSRLFLRRRLSTLQWMAIVLLAVGTTTSQVKGCGEALCDSLFAAPIQGYLLGVLSACLSALAGVYTEFLMKKNNDSLYWQNVQLYTFGAIFNMFRLLLDDFRGGFEKGPWWQRLFDGYNITTWMVVFNLGSTGLLVSWLMKYADNIIKVYSTSMAMLLTMVLSVYLFNFKPTLQLFLGIIICMMSLHMYFAPPGMLVDIPSTAKAAPDSLREVSVERRTDS
Secondary Structure (PSIPRED)
cccccccccHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHcccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
ccHHHHccccHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHEEEEcccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHccccccEHHHHHHHHHHHHHHHHHHHHHHcHHHHHHcccccHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHcccccccccccccccccccHcccccccccccc
Coil and Loop (DISEMBL)
meaismitrpfhfslKFSRLFLRRRLSTLQWMAIVLLAVGtttsqvkgcgeALCDSLFAAPIQGYLLGVLSACLSALAGVYTEFLMKKNNDSLYWQNVQLYTFGAIFNMFRLLLDDfrggfekgpwwqrlfdgyniTTWMVVFNLGSTGLLVSWLMKYADNIIKVYSTSMAMLLTMVLSVYLFNFKPTLQLFLGIIICMMSlhmyfappgmlvdipstakaapdslrEVSVERRTDS
Flexible Loop (DISEMBL)
meaismitrpfhfslkFSRLFLRRRLSTLQWMAIVLLAVGTTTSQVKGCGEALCDSLFAAPIQGYLLGVLSACLSALAGVYTEFLMKKNNDSLYWQNVQLYTFGAIFNMFRLLLDDFRGGFEKGPWWQRLFDGYNITTWMVVFNLGSTGLLVSWLMKYADNIIKVYSTSMAMLLTMVLSVYLFNFKPTLQLFLGIIICMMSLHMYFAPPGMLVDIPSTakaapdslrevsverrtds
Low Complexity Region (SEG)
MEAISMITRPfhfslkfsrlflrrrlsTLQWMAIVLLAVGTTTSQVKGCGEALCDSLFAAPIQGYLLGVLSACLSALAGVYTEFLMKKNNDSLYWQNVQLYTFGAIFNMFRLLLDDFRGGFEKGPWWQRLFDGYNITTWMVVFNLGSTGLLVSWLMKYADNIIKVYSTSMAMLLTMVLSVYLFNFKPTLQLFLGIIICMMSLHMYFAPPGMLVDIPSTAKAAPDSLREVSVERRTDS
Disordered region (IsUnstruct)
*****MITRPFHFSLKFSRLFLRRRLSTLQWMAIVLLAVGTTTSQVKGCGEALCDSLFAAPIQGYLLGVLSACLSALAGVYTEFLMKKNNDSLYWQNVQLYTFGAIFNMFRLLLDDFRGGFEKGPWWQRLFDGYNITTWMVVFNLGSTGLLVSWLMKYADNIIKVYSTSMAMLLTMVLSVYLFNFKPTLQLFLGIIICMMSLHMYFAPPGMLVDI**********************
Disordered Region (DISOPRED)
*EAISMITRPFHFSLKFSRLFLRRRLSTLQWMAIVLLAVGTTTSQVK************APIQGYLLGVLSACLSALAGVYTEFLMKKNNDSLYWQNVQLYTFGAIFNMFRLLLDDFRGGFEKGPWWQRLFDGYNITTWMVVFNLGSTGLLVSWLMKYADNIIKVYSTSMAMLLTMVLSVYLFNFKPTLQLFLGIIICMMSLHMY********************************
Disordered Region (DISEMBL)
MEAISMITRPFHFSLKFSRLFLRRRLSTLQWMAIVLLAVGTTTSQVKGCGEALCDSLFAAPIQGYLLGVLSACLSALAGVYTEFLMKKNNDSLYWQNVQLYTFGAIFNMFRLLLDDFRGGFEKGPWWQRLFDGYNITTWMVVFNLGSTGLLVSWLMKYADNIIKVYSTSMAMLLTMVLSVYLFNFKPTLQLFLGIIICMMSLHMYFAPPGMLVDIPST*******************
Disordered Region (DISPRO)
***ISMITRPFHFSLKFSRLFLRRRLSTLQWMAIVLLAVGTTTSQVKGCG******LFAAPIQGYLLGVLSACLSALAGVYTEFLMKKNNDSLYWQNVQLYTFGAIFNMFRLLLDDFRGGFEKGPWWQRLFDGYNITTWMVVFNLGSTGLLVSWLMKYADNIIKVYSTSMAMLLTMVLSVYLFNFKPTLQLFLGIIICMMSLHMYFAPP****************************
Transmembrane Helix (TMHMM)
iiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHoooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiHHHHHHHHHHHHHHHHHHHHHHHHHooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiHHHHHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MEAISMITRPFHFSLKFSRLFLRRRLSTLQWMAIVLLAVGTTTSQVKGCGEALCDSLFAAPIQGYLLGVLSACLSALAGVYTEFLMKKNNDSLYWQNVQLYTFGAIFNMFRLLLDDFRGGFEKGPWWQRLFDGYNITTWMVVFNLGSTGLLVSWLMKYADNIIKVYSTSMAMLLTMVLSVYLFNFKPTLQLFLGIIICMMSLHMYFAPPGMLVDIPSTAKAAPDSLREVSVERRTDS
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	237	2.2.26 [Sep-21-2011]
Q8LGE9	340	CMP-sialic acid transport	yes	no	0.924	0.644	0.799	1e-104
F4JN00	352	CMP-sialic acid transport	no	no	0.759	0.511	0.405	3e-32
Q8GY97	406	CMP-sialic acid transport	no	no	0.776	0.453	0.336	8e-24
Q9C5H6	405	CMP-sialic acid transport	no	no	0.784	0.459	0.319	2e-23
Q9R0M8	390	UDP-galactose translocato	yes	no	0.814	0.494	0.337	4e-22
P87041	353	UDP-galactose transporter	yes	no	0.835	0.560	0.334	9e-21
P78381	396	UDP-galactose translocato	yes	no	0.759	0.454	0.339	3e-20
Q8WMS0	397	UDP-galactose translocato	yes	no	0.759	0.453	0.339	3e-20
Q93890	368	UDP-galactose/UDP-N-acety	yes	no	0.835	0.538	0.319	3e-20
O77592	326	UDP-N-acetylglucosamine t	no	no	0.793	0.576	0.336	4e-20

>sp|Q8LGE9|CSTR1_ARATH CMP-sialic acid transporter 1 OS=Arabidopsis thaliana GN=At5g41760 PE=2 SV=1

 Score =  377 bits (968), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 175/219 (79%), Positives = 200/219 (91%)

Query: 19  RLFLRRRLSTLQWMAIVLLAVGTTTSQVKGCGEALCDSLFAAPIQGYLLGVLSACLSALA 78
           RLFL+R+LS LQWMAI LLAVGTTTSQVKGCGEA CDSLF APIQGYLLG+LSA LSALA
Sbjct: 122 RLFLKRKLSKLQWMAIGLLAVGTTTSQVKGCGEASCDSLFTAPIQGYLLGILSAGLSALA 181

Query: 79  GVYTEFLMKKNNDSLYWQNVQLYTFGAIFNMFRLLLDDFRGGFEKGPWWQRLFDGYNITT 138
           G+YTEFLMK+NND+LYWQN+QLYTFG++FN+ RL+ DDFR GFEKGPWWQR+FDGY+ITT
Sbjct: 182 GIYTEFLMKRNNDTLYWQNLQLYTFGSLFNVARLIADDFRHGFEKGPWWQRIFDGYSITT 241

Query: 139 WMVVFNLGSTGLLVSWLMKYADNIIKVYSTSMAMLLTMVLSVYLFNFKPTLQLFLGIIIC 198
           W+VV NLGSTGLLVSWLMKYADNI+KVYSTSMAMLLTMV S+YLF+FKPTLQLFLGI+IC
Sbjct: 242 WLVVLNLGSTGLLVSWLMKYADNIVKVYSTSMAMLLTMVASIYLFSFKPTLQLFLGIVIC 301

Query: 199 MMSLHMYFAPPGMLVDIPSTAKAAPDSLREVSVERRTDS 237
           +MSLHMYFAPP  LVD+P T +A   +L++V VE +TDS
Sbjct: 302 IMSLHMYFAPPHTLVDLPVTNEAHAKTLKQVVVEEKTDS 340

Essential protein. Sugar transporter involved in the transport of CMP-sialic acid from the cytoplasm into the Golgi.
Arabidopsis thaliana (taxid: 3702)

>sp|F4JN00|CSTR4_ARATH CMP-sialic acid transporter 4 OS=Arabidopsis thaliana GN=At4g35335 PE=2 SV=1

 Score =  138 bits (348), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 77/190 (40%), Positives = 116/190 (61%), Gaps = 10/190 (5%)

Query: 19  RLFLRRRLSTLQWMAIVLLAVGTTTSQVKGCGEALCDSLFAAPIQGYLLGVLSACLSALA 78
           R+ L+R+LS +QW   +LL  G TT+Q+        D +    + G+ + ++ A LS  A
Sbjct: 168 RIILKRKLSEIQWAGFILLCCGCTTAQLNSNS----DRVLQTSLPGWTMAIVMALLSGFA 223

Query: 79  GVYTEFLMKKN-NDSLYWQNVQLYTFGAIFNMFRLLLDDFRGGFEKGPWWQRLFDGYNIT 137
           GVYTE ++KK  + ++  QN  LY FG  FN   +++ DF     KG      F GY+  
Sbjct: 224 GVYTEAIIKKRPSRNINVQNFWLYVFGMAFNAVAIVIQDFDAVANKG-----FFHGYSFI 278

Query: 138 TWMVVFNLGSTGLLVSWLMKYADNIIKVYSTSMAMLLTMVLSVYLFNFKPTLQLFLGIII 197
           T +++ N   +G+ VS +MKYADNI+KVYSTS+AMLLT V+SV+LFNF  +L  FLG  +
Sbjct: 279 TLLMILNHALSGIAVSMVMKYADNIVKVYSTSVAMLLTAVVSVFLFNFHLSLAFFLGSTV 338

Query: 198 CMMSLHMYFA 207
             +S++++ A
Sbjct: 339 VSVSVYLHSA 348

Sugar transporter involved in the transport of CMP-sialic acid from the cytoplasm into the Golgi (By similarity). Essential protein.

Arabidopsis thaliana (taxid: 3702)

>sp|Q8GY97|CSTR2_ARATH CMP-sialic acid transporter 2 OS=Arabidopsis thaliana GN=At2g43240 PE=2 SV=1

 Score =  110 bits (275), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 65/193 (33%), Positives = 106/193 (54%), Gaps = 9/193 (4%)

Query: 19  RLFLRRRLSTLQWMAIVLLAVGTTTSQVKGCGEALCDSLFAAPIQ--GYLLGVLSACLSA 76
           ++ ++RR S +QW A+ LL +G + +Q++   E    +  A PI    Y+   +   + +
Sbjct: 166 KMIMKRRFSIIQWEALALLLIGISINQLRSLPEG--ATTVAVPIATGAYICTFIFVTVPS 223

Query: 77  LAGVYTEFLMKKNND-SLYWQNVQLYTFGAIFNMFRLLLDDFRGGFEKGPWWQRLFDGYN 135
           LA VY E+ +K   D S+Y QN+ LY +GAIFN   +L         KGP    +  G++
Sbjct: 224 LASVYNEYALKSQYDTSIYLQNLFLYGYGAIFNFLGIL----GTVIYKGPGSFDILQGHS 279

Query: 136 ITTWMVVFNLGSTGLLVSWLMKYADNIIKVYSTSMAMLLTMVLSVYLFNFKPTLQLFLGI 195
             T  ++ N  + G+L S+  KYAD I+K YS+++A + T + S  LF    T+   LGI
Sbjct: 280 RATMFLILNNAAQGILSSFFFKYADTILKKYSSTVATIFTGIASAALFGHILTMNFLLGI 339

Query: 196 IICMMSLHMYFAP 208
            I  +S+H +F+P
Sbjct: 340 SIVFISMHQFFSP 352

Sugar transporter involved in the transport of CMP-sialic acid from the cytoplasm into the Golgi.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9C5H6|CSTR3_ARATH CMP-sialic acid transporter 3 OS=Arabidopsis thaliana GN=UTR6 PE=2 SV=1

 Score =  108 bits (271), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 61/191 (31%), Positives = 103/191 (53%), Gaps = 5/191 (2%)

Query: 19  RLFLRRRLSTLQWMAIVLLAVGTTTSQVKGCGEALCDSLFAAPIQGYLLGVLSACLSALA 78
           ++ ++RR S +QW A+ LL +G + +Q++   E             Y+  V+   + ++A
Sbjct: 164 KMVMKRRFSIIQWEALALLLIGISVNQLRSLPEGATAIGIPLATGAYVCTVIFVTVPSMA 223

Query: 79  GVYTEFLMKKNND-SLYWQNVQLYTFGAIFNMFRLLLDDFRGGFEKGPWWQRLFDGYNIT 137
            V+ E+ +K   D S+Y QN+ LY +GAIFN   +L         KGP    +  G++  
Sbjct: 224 SVFNEYALKSQYDTSIYLQNLFLYGYGAIFNFLGIL----GTVIYKGPGSFDILQGHSRA 279

Query: 138 TWMVVFNLGSTGLLVSWLMKYADNIIKVYSTSMAMLLTMVLSVYLFNFKPTLQLFLGIII 197
           T  ++ N  + G+L S+  KYAD I+K YS+++A + T + S  LF    T+   LGI I
Sbjct: 280 TMFLILNNAAQGILSSFFFKYADTILKKYSSTVATIFTGIASAALFGHVITMNFLLGISI 339

Query: 198 CMMSLHMYFAP 208
             +S+H +F+P
Sbjct: 340 VFISMHQFFSP 350

Sugar transporter involved in the transport of CMP-sialic acid from the cytoplasm into the Golgi.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9R0M8|S35A2_MOUSE UDP-galactose translocator OS=Mus musculus GN=Slc35a2 PE=2 SV=1

 Score =  105 bits (261), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 73/216 (33%), Positives = 112/216 (51%), Gaps = 23/216 (10%)

Query: 17  FSRLFLRRRLSTLQWMAIVLLAVGTTTSQVKGCGEALCDSLFAAPIQGYLLGVLSACLSA 76
           FS L L R LS LQW +++LL  G    Q +  G +    L   P  G L  V+++CLS+
Sbjct: 155 FSVLMLNRSLSRLQWASLLLLFTGVAIVQAQQAGGSGPRPLDQNPGAG-LAAVVASCLSS 213

Query: 77  -LAGVYTEFLMKKNNDSLYWQNVQLYTFGAIFNMFRLLLDDFRGGFEKGPWW-------- 127
             AGVY E ++K ++ S++ +N+QL  FG    +              G WW        
Sbjct: 214 GFAGVYFEKILKGSSGSVWLRNLQLGLFGTALGLV-------------GLWWAEGTAVAS 260

Query: 128 QRLFDGYNITTWMVVFNLGSTGLLVSWLMKYADNIIKVYSTSMAMLLTMVLSVYLFNFKP 187
           Q  F GY    W VV N    GLLV+ ++KYADNI+K ++TS++++L+ V S+ LF F  
Sbjct: 261 QGFFFGYTPAVWGVVLNQAFGGLLVAVVVKYADNILKGFATSLSIVLSTVASIRLFGFHL 320

Query: 188 TLQLFLGIIICMMSLHMYFAPPGMLVDIPSTAKAAP 223
                LG  + + ++++Y  P G +  I S + + P
Sbjct: 321 DPLFALGAGLVIGAVYLYSLPRGAVKAIASASASGP 356

Transports nucleotide sugars from the cytosol into Golgi vesicles where glycosyltransferases function.

Mus musculus (taxid: 10090)

>sp|P87041|GMS1_SCHPO UDP-galactose transporter OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=gms1 PE=2 SV=3

 Score =  100 bits (249), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 72/215 (33%), Positives = 115/215 (53%), Gaps = 17/215 (7%)

Query: 17  FSRLFLRRRLSTLQWMAIVLLAVGTTTSQVKGCGEALCDSLFAAP---IQGYLLGVLSAC 73
           FS L L RRL  ++W ++ LL  G    Q++       D + A P   + G+   VL AC
Sbjct: 138 FSILLLHRRLGPMKWFSLFLLTGGIAIVQLQNLNSD--DQMSAGPMNPVTGFS-AVLVAC 194

Query: 74  L-SALAGVYTEFLMKKNNDSLYWQNVQLYTFGAIFNMFRLLLDDFRGGFEKGPWWQRLFD 132
           L S LAGVY E ++K  N SL+ +NVQL  F     +F +L+ D+    E G      F 
Sbjct: 195 LISGLAGVYFEKVLKDTNPSLWVRNVQLSFFSLFPCLFTILMKDYHNIAENG-----FFF 249

Query: 133 GYNITTWMVVFNLGSTGLLVSWLMKYADNIIKVYSTSMAMLLTMVLSVYLFNFKPTLQLF 192
           GYN   W+ +      G++V+  + +ADNI+K +STS++++++ + SVYL +FK +L   
Sbjct: 250 GYNSIVWLAILLQAGGGIIVALCVAFADNIMKNFSTSISIIISSLASVYLMDFKISLTFL 309

Query: 193 LGIIICMMSLHMYFAP-----PGMLVDIPSTAKAA 222
           +G+++ + +  +Y  P     P     IP T + A
Sbjct: 310 IGVMLVIAATFLYTKPESKPSPSRGTYIPMTTQDA 344

Essential for the transport of UDP-galactose into the lumen of Golgi apparatus.

Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812)

>sp|P78381|S35A2_HUMAN UDP-galactose translocator OS=Homo sapiens GN=SLC35A2 PE=2 SV=1

 Score = 99.0 bits (245), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 69/203 (33%), Positives = 104/203 (51%), Gaps = 23/203 (11%)

Query: 17  FSRLFLRRRLSTLQWMAIVLLAVGTTTSQVKGCGEALCDSLFAAPIQGYLLGVLSACLSA 76
           FS L L R LS LQW +++LL  G    Q +  G      L   P  G L  V+++CLS+
Sbjct: 155 FSVLMLNRSLSRLQWASLLLLFTGVAIVQAQQAGGGGPRPLDQNPGAG-LAAVVASCLSS 213

Query: 77  -LAGVYTEFLMKKNNDSLYWQNVQLYTFGAIFNMFRLLLDDFRGGFEKGPWWQR------ 129
             AGVY E ++K ++ S++ +N+QL  FG    +  L             WW        
Sbjct: 214 GFAGVYFEKILKGSSGSVWLRNLQLGLFGTALGLVGL-------------WWAEGTAVAT 260

Query: 130 --LFDGYNITTWMVVFNLGSTGLLVSWLMKYADNIIKVYSTSMAMLLTMVLSVYLFNFKP 187
              F GY    W VV N    GLLV+ ++KYADNI+K ++TS++++L+ V S+ LF F  
Sbjct: 261 RGFFFGYTPAVWGVVLNQAFGGLLVAVVVKYADNILKGFATSLSIVLSTVASIRLFGFHV 320

Query: 188 TLQLFLGIIICMMSLHMYFAPPG 210
                LG  + + ++++Y  P G
Sbjct: 321 DPLFALGAGLVIGAVYLYSLPRG 343

Transports nucleotide sugars from the cytosol into Golgi vesicles where glycosyltransferases function.

Homo sapiens (taxid: 9606)

>sp|Q8WMS0|S35A2_CANFA UDP-galactose translocator OS=Canis familiaris GN=SLC35A2 PE=2 SV=2

 Score = 98.6 bits (244), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 69/203 (33%), Positives = 104/203 (51%), Gaps = 23/203 (11%)

Query: 17  FSRLFLRRRLSTLQWMAIVLLAVGTTTSQVKGCGEALCDSLFAAPIQGYLLGVLSACLSA 76
           FS L L R LS LQW +++LL  G    Q +  G      L   P  G L  V+++CLS+
Sbjct: 155 FSVLMLNRSLSRLQWASLLLLFTGVAIVQAQQAGGGGPRPLDQNPGAG-LAAVVASCLSS 213

Query: 77  -LAGVYTEFLMKKNNDSLYWQNVQLYTFGAIFNMFRLLLDDFRGGFEKGPWWQR------ 129
             AGVY E ++K ++ S++ +N+QL  FG    +  L             WW        
Sbjct: 214 GFAGVYFEKILKGSSGSVWLRNLQLGLFGTALGLVGL-------------WWAEGTAVAR 260

Query: 130 --LFDGYNITTWMVVFNLGSTGLLVSWLMKYADNIIKVYSTSMAMLLTMVLSVYLFNFKP 187
              F GY    W VV N    GLLV+ ++KYADNI+K ++TS++++L+ V S+ LF F  
Sbjct: 261 RGFFFGYTPAVWGVVLNQAFGGLLVAVVVKYADNILKGFATSLSIVLSTVASIRLFGFHV 320

Query: 188 TLQLFLGIIICMMSLHMYFAPPG 210
                LG  + + ++++Y  P G
Sbjct: 321 DPLFALGAGLVIGAVYLYSLPRG 343

Transports nucleotide sugars from the cytosol into Golgi vesicles where glycosyltransferases function.

Canis familiaris (taxid: 9615)

>sp|Q93890|SRF3_CAEEL UDP-galactose/UDP-N-acetylglucosamine transporter srf-3 OS=Caenorhabditis elegans GN=srf-3 PE=1 SV=5

 Score = 98.6 bits (244), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 68/213 (31%), Positives = 117/213 (54%), Gaps = 15/213 (7%)

Query: 17  FSRLFLRRRLSTLQWMAIVLLAVGTTTSQVKGCGEALCDSLFAAPIQGYLLGVLSACLSA 76
           F+ + LRR L+  QW A+ +L VG +  Q++G      +S   +P  G++  V++ CLS 
Sbjct: 160 FTVIILRRSLNRTQWFALAVLFVGVSLVQLQGTKAK--ESSGESPFVGFVAVVVACCLSG 217

Query: 77  LAGVYTEFLMKKNND-SLYWQNVQLYTFGAIFNMFRLLLDDFRGGFEKGPWWQRLFDGYN 135
            AG+Y E ++K +   SL+ +NVQ+  F    +   + + D +   E G     L  G++
Sbjct: 218 FAGIYFEKILKGSAPVSLWMRNVQMAVFSIPASFSAIYMQDSKTVNEYG-----LLYGFD 272

Query: 136 ITTWMVVFNLGSTGLLVSWLMKYADNIIKVYSTSMAMLLTMVLSVYLFNFKPTLQLFLGI 195
              W+ V   G  GL V+  +KYADNI K ++TS+A++L+ + S++LF+F P+    LG 
Sbjct: 273 SIVWLTVLWYGVGGLSVAVCIKYADNIAKNFATSVAIILSTIGSIFLFDFIPSFTFLLGA 332

Query: 196 IICMMSLHMYFAPPGMLV-------DIPSTAKA 221
            + + S+ +Y +   M+        +IPST +A
Sbjct: 333 SLVIFSIFLYSSHQSMVAALGRLRGEIPSTKEA 365

Acts as a transporter of both UDP-galactose and UDP-N-acetylglucosamine into the Golgi lumen.

Caenorhabditis elegans (taxid: 6239)

>sp|O77592|S35A3_CANFA UDP-N-acetylglucosamine transporter OS=Canis familiaris GN=SLC35A3 PE=2 SV=1

 Score = 98.2 bits (243), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 66/196 (33%), Positives = 111/196 (56%), Gaps = 8/196 (4%)

Query: 17  FSRLFLRRRLSTLQWMAIVLLAVGTTTSQVKGCGEALCDSLFAAPIQGY-LLGVLSACLS 75
           FS   L ++L   QW+++V+L  G    Q     + L     +A  Q   L+ VL+AC S
Sbjct: 127 FSVSMLSKKLGVYQWLSLVILMTGVAFVQWPSDSQELDSKELSAGSQFVGLMAVLTACFS 186

Query: 76  A-LAGVYTEFLMKKNNDSLYWQNVQLYTFGAIFNMFRLLLDDFRGGFEKGPWWQRLFDGY 134
           +  AGVY E ++K+   S++ +N+QL  FG+IF +  + + D     + G      F GY
Sbjct: 187 SGFAGVYFEKILKETKQSVWIRNIQLGFFGSIFGLMGVYIYDGELVSKNG-----FFQGY 241

Query: 135 NITTWMVVFNLGSTGLLVSWLMKYADNIIKVYSTSMAMLLTMVLSVY-LFNFKPTLQLFL 193
           N  TW+VV      GL+++ ++KYADNI+K ++TS++++L+ ++S + L +F PT   FL
Sbjct: 242 NRLTWIVVILQALGGLVIAAVIKYADNILKGFATSLSIILSTLISYFWLQDFVPTSVFFL 301

Query: 194 GIIICMMSLHMYFAPP 209
           G I+ + +  +Y   P
Sbjct: 302 GAILVITATFLYGYDP 317

Uridine diphosphate-N-acetylglucosamine transporter in the Golgi apparatus.

Canis familiaris (taxid: 9615)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	237
255583816	335	cmp-sialic acid transporter, putative [R	0.924	0.653	0.876	1e-111
224075072	335	predicted protein [Populus trichocarpa]	0.890	0.629	0.872	1e-107
225454456	331	PREDICTED: CMP-sialic acid transporter [	0.907	0.649	0.840	1e-107
147772007	392	hypothetical protein VITISV_039397 [Viti	0.907	0.548	0.840	1e-106
356573211	335	PREDICTED: LOW QUALITY PROTEIN: probable	0.924	0.653	0.840	1e-106
449499467	337	PREDICTED: CMP-sialic acid transporter 1	0.924	0.649	0.841	1e-106
449446259	337	PREDICTED: CMP-sialic acid transporter 1	0.924	0.649	0.837	1e-105
224053803	335	predicted protein [Populus trichocarpa]	0.890	0.629	0.848	1e-105
356506046	335	PREDICTED: probable UDP-sugar transporte	0.924	0.653	0.826	1e-104
297805474	340	nucleotide-sugar transporter family prot	0.924	0.644	0.808	1e-103

>gi|255583816|ref|XP_002532660.1| cmp-sialic acid transporter, putative [Ricinus communis] gi|223527620|gb|EEF29733.1| cmp-sialic acid transporter, putative [Ricinus communis]

 Score =  407 bits (1045), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 192/219 (87%), Positives = 206/219 (94%)

Query: 19  RLFLRRRLSTLQWMAIVLLAVGTTTSQVKGCGEALCDSLFAAPIQGYLLGVLSACLSALA 78
           RLFL+++LS LQWMAI LLAVGTTTSQVKGCGEA CDSLF++PIQGY+LG+LSACLSALA
Sbjct: 117 RLFLKKKLSNLQWMAIALLAVGTTTSQVKGCGEASCDSLFSSPIQGYMLGILSACLSALA 176

Query: 79  GVYTEFLMKKNNDSLYWQNVQLYTFGAIFNMFRLLLDDFRGGFEKGPWWQRLFDGYNITT 138
           GVYTEFLMKKNNDSLYWQN+QLYTFGAIFNM RLLLDDFRGGFEKGPWWQRLF GY ITT
Sbjct: 177 GVYTEFLMKKNNDSLYWQNIQLYTFGAIFNMARLLLDDFRGGFEKGPWWQRLFSGYTITT 236

Query: 139 WMVVFNLGSTGLLVSWLMKYADNIIKVYSTSMAMLLTMVLSVYLFNFKPTLQLFLGIIIC 198
           WMVV NLG +GLLVSWLMKYADNI+KVYSTSMAMLLTMVLSV+LFNF PTLQLFLGIIIC
Sbjct: 237 WMVVLNLGCSGLLVSWLMKYADNIVKVYSTSMAMLLTMVLSVFLFNFSPTLQLFLGIIIC 296

Query: 199 MMSLHMYFAPPGMLVDIPSTAKAAPDSLREVSVERRTDS 237
           MMSLHMYFAPPGMLVD+PS  KA P+SL +VSVERRTDS
Sbjct: 297 MMSLHMYFAPPGMLVDLPSMGKADPESLIDVSVERRTDS 335

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224075072|ref|XP_002304546.1| predicted protein [Populus trichocarpa] gi|222841978|gb|EEE79525.1| predicted protein [Populus trichocarpa]

 Score =  393 bits (1010), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 184/211 (87%), Positives = 199/211 (94%)

Query: 27  STLQWMAIVLLAVGTTTSQVKGCGEALCDSLFAAPIQGYLLGVLSACLSALAGVYTEFLM 86
           S LQWMAIVLLAVGTTTSQVKGCGEA CDSLFAAPIQGY+LGVLSACLSALAGVYTEFLM
Sbjct: 125 SNLQWMAIVLLAVGTTTSQVKGCGEASCDSLFAAPIQGYMLGVLSACLSALAGVYTEFLM 184

Query: 87  KKNNDSLYWQNVQLYTFGAIFNMFRLLLDDFRGGFEKGPWWQRLFDGYNITTWMVVFNLG 146
           KKNNDSLYWQNVQLYTFG+IFNM RL+LDD+RGG+E G WWQRLF+GY+ITTWMVV NLG
Sbjct: 185 KKNNDSLYWQNVQLYTFGSIFNMARLVLDDYRGGYENGSWWQRLFNGYSITTWMVVLNLG 244

Query: 147 STGLLVSWLMKYADNIIKVYSTSMAMLLTMVLSVYLFNFKPTLQLFLGIIICMMSLHMYF 206
           STGLLVSWLMKYADNI+KVYSTS+AMLLTMVLSVYLFN KPTLQL LG IICMMSLHMYF
Sbjct: 245 STGLLVSWLMKYADNIVKVYSTSLAMLLTMVLSVYLFNLKPTLQLLLGTIICMMSLHMYF 304

Query: 207 APPGMLVDIPSTAKAAPDSLREVSVERRTDS 237
           APP MLVD+P+  +AAP+SL+EV+VERRTDS
Sbjct: 305 APPNMLVDLPTQVRAAPESLKEVAVERRTDS 335

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225454456|ref|XP_002280548.1| PREDICTED: CMP-sialic acid transporter [Vitis vinifera] gi|297745398|emb|CBI40478.3| unnamed protein product [Vitis vinifera]

 Score =  392 bits (1007), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 184/219 (84%), Positives = 205/219 (93%), Gaps = 4/219 (1%)

Query: 19  RLFLRRRLSTLQWMAIVLLAVGTTTSQVKGCGEALCDSLFAAPIQGYLLGVLSACLSALA 78
           RLFLRR+LS LQWMAIVLLA+GTTTSQV+GCGEA CDSLF+APIQGY+LG+LSACLSALA
Sbjct: 117 RLFLRRKLSNLQWMAIVLLAIGTTTSQVRGCGEASCDSLFSAPIQGYMLGILSACLSALA 176

Query: 79  GVYTEFLMKKNNDSLYWQNVQLYTFGAIFNMFRLLLDDFRGGFEKGPWWQRLFDGYNITT 138
           GVYTEFLMKKN+DSLYWQNVQLYTFGAIFNM RL+LDD+R GFEKGPWW RLF+GY++TT
Sbjct: 177 GVYTEFLMKKNDDSLYWQNVQLYTFGAIFNMARLILDDYRSGFEKGPWWHRLFNGYSVTT 236

Query: 139 WMVVFNLGSTGLLVSWLMKYADNIIKVYSTSMAMLLTMVLSVYLFNFKPTLQLFLGIIIC 198
           WMVV NLGSTGLLVSWLMKYADNI+KVYSTSMAMLLTMVLSV+LFNFKPTLQLFLGI+IC
Sbjct: 237 WMVVLNLGSTGLLVSWLMKYADNIVKVYSTSMAMLLTMVLSVFLFNFKPTLQLFLGIVIC 296

Query: 199 MMSLHMYFAPPGMLVDIPSTAKAAPDSLREVSVERRTDS 237
           MMSLHMYFAPP MLVD+P T K+AP+S     ++RRT+S
Sbjct: 297 MMSLHMYFAPPTMLVDLPLTVKSAPES----HIDRRTNS 331

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147772007|emb|CAN60247.1| hypothetical protein VITISV_039397 [Vitis vinifera]

 Score =  391 bits (1005), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 184/219 (84%), Positives = 205/219 (93%), Gaps = 4/219 (1%)

Query: 19  RLFLRRRLSTLQWMAIVLLAVGTTTSQVKGCGEALCDSLFAAPIQGYLLGVLSACLSALA 78
           RLFLRR+LS LQWMAIVLLA+GTTTSQV+GCGEA CDSLF+APIQGY+LG+LSACLSALA
Sbjct: 178 RLFLRRKLSNLQWMAIVLLAIGTTTSQVRGCGEASCDSLFSAPIQGYMLGILSACLSALA 237

Query: 79  GVYTEFLMKKNNDSLYWQNVQLYTFGAIFNMFRLLLDDFRGGFEKGPWWQRLFDGYNITT 138
           GVYTEFLMKKN+DSLYWQNVQLYTFGAIFNM RL+LDD+R GFEKGPWW RLF+GY++TT
Sbjct: 238 GVYTEFLMKKNDDSLYWQNVQLYTFGAIFNMARLILDDYRSGFEKGPWWHRLFNGYSVTT 297

Query: 139 WMVVFNLGSTGLLVSWLMKYADNIIKVYSTSMAMLLTMVLSVYLFNFKPTLQLFLGIIIC 198
           WMVV NLGSTGLLVSWLMKYADNI+KVYSTSMAMLLTMVLSV+LFNFKPTLQLFLGI+IC
Sbjct: 298 WMVVLNLGSTGLLVSWLMKYADNIVKVYSTSMAMLLTMVLSVFLFNFKPTLQLFLGIVIC 357

Query: 199 MMSLHMYFAPPGMLVDIPSTAKAAPDSLREVSVERRTDS 237
           MMSLHMYFAPP MLVD+P T K+AP+S     ++RRT+S
Sbjct: 358 MMSLHMYFAPPTMLVDLPLTVKSAPES----HIDRRTNS 392

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356573211|ref|XP_003554757.1| PREDICTED: LOW QUALITY PROTEIN: probable UDP-sugar transporter protein SLC35A4-like [Glycine max]

 Score =  390 bits (1001), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 184/219 (84%), Positives = 201/219 (91%)

Query: 19  RLFLRRRLSTLQWMAIVLLAVGTTTSQVKGCGEALCDSLFAAPIQGYLLGVLSACLSALA 78
           RLFL RRLS LQWMAIVLLAVGTTTSQV+GCGEA CDSLF+APIQGY+LGVLSACLSALA
Sbjct: 117 RLFLGRRLSNLQWMAIVLLAVGTTTSQVRGCGEASCDSLFSAPIQGYMLGVLSACLSALA 176

Query: 79  GVYTEFLMKKNNDSLYWQNVQLYTFGAIFNMFRLLLDDFRGGFEKGPWWQRLFDGYNITT 138
           G+YTEFLMKKNNDSLYWQN+QLYTFG +FNM RLL DDFRGGFE GPWWQR+F+GY ITT
Sbjct: 177 GIYTEFLMKKNNDSLYWQNIQLYTFGTLFNMARLLADDFRGGFENGPWWQRIFNGYTITT 236

Query: 139 WMVVFNLGSTGLLVSWLMKYADNIIKVYSTSMAMLLTMVLSVYLFNFKPTLQLFLGIIIC 198
           WMVV NLGSTGLLVSWLMK+ADNI+KVYSTSMAMLLTM+LS++LFNFKPTLQLFLGIIIC
Sbjct: 237 WMVVLNLGSTGLLVSWLMKHADNIVKVYSTSMAMLLTMILSLFLFNFKPTLQLFLGIIIC 296

Query: 199 MMSLHMYFAPPGMLVDIPSTAKAAPDSLREVSVERRTDS 237
           MMSLHMYFAPP ML+D+P T K   + L EVSV+RRT S
Sbjct: 297 MMSLHMYFAPPNMLLDMPXTVKPDEEKLIEVSVDRRTLS 335

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449499467|ref|XP_004160825.1| PREDICTED: CMP-sialic acid transporter 1-like [Cucumis sativus]

 Score =  390 bits (1001), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 186/221 (84%), Positives = 202/221 (91%), Gaps = 2/221 (0%)

Query: 19  RLFLRRRLSTLQWMAIVLLAVGTTTSQVKGCGEALCDSLFAAPIQGYLLGVLSACLSALA 78
           RLFLRR+LS LQWMAIVLLAVGTTTSQVKGCGEA C+SL +APIQGY+LG+LSACLSALA
Sbjct: 117 RLFLRRKLSNLQWMAIVLLAVGTTTSQVKGCGEASCESLLSAPIQGYMLGILSACLSALA 176

Query: 79  GVYTEFLMKKNNDSLYWQNVQLYTFGAIFNMFRLLLDDFRGGFEKGPWWQRLFDGYNITT 138
           G+YTEFLMKKNNDSLYWQNVQLYTFGAIFNM RL+ DDFRGGFEKGPWWQRL +GY++TT
Sbjct: 177 GIYTEFLMKKNNDSLYWQNVQLYTFGAIFNMARLVADDFRGGFEKGPWWQRLLNGYSVTT 236

Query: 139 WMVVFNLGSTGLLVSWLMKYADNIIKVYSTSMAMLLTMVLSVYLFNFKPTLQLFLGIIIC 198
           WMVV NLGSTGLLVSWLMKYADNI+KVYSTSMAMLLT +LSVYLFNFKPTLQLFLGII+C
Sbjct: 237 WMVVINLGSTGLLVSWLMKYADNIVKVYSTSMAMLLTTILSVYLFNFKPTLQLFLGIIVC 296

Query: 199 MMSLHMYFAPPGMLVDIPSTAKAAPD--SLREVSVERRTDS 237
           MMSLHMYFAPP MLVD+P     + D  SL EVS +RRTDS
Sbjct: 297 MMSLHMYFAPPQMLVDLPPPVVKSQDLESLIEVSSDRRTDS 337

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449446259|ref|XP_004140889.1| PREDICTED: CMP-sialic acid transporter 1-like [Cucumis sativus]

 Score =  388 bits (996), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 185/221 (83%), Positives = 201/221 (90%), Gaps = 2/221 (0%)

Query: 19  RLFLRRRLSTLQWMAIVLLAVGTTTSQVKGCGEALCDSLFAAPIQGYLLGVLSACLSALA 78
           RLFLRR+LS LQWMAIVLLAVGTTTSQVKGCGEA C+SL +APIQGY+LG+LSACLSALA
Sbjct: 117 RLFLRRKLSNLQWMAIVLLAVGTTTSQVKGCGEASCESLLSAPIQGYMLGILSACLSALA 176

Query: 79  GVYTEFLMKKNNDSLYWQNVQLYTFGAIFNMFRLLLDDFRGGFEKGPWWQRLFDGYNITT 138
           G+YTEFLMKKNNDSLYWQNVQLYTFGAIFNM RL+ DDFRGGFEKGPWWQRL +GY++TT
Sbjct: 177 GIYTEFLMKKNNDSLYWQNVQLYTFGAIFNMARLVADDFRGGFEKGPWWQRLLNGYSVTT 236

Query: 139 WMVVFNLGSTGLLVSWLMKYADNIIKVYSTSMAMLLTMVLSVYLFNFKPTLQLFLGIIIC 198
           WMVV NLGSTGLLVSWLMKYADNI+KVYSTSMAMLLT +LSVYLFNFKPTLQLFLGII+C
Sbjct: 237 WMVVINLGSTGLLVSWLMKYADNIVKVYSTSMAMLLTTILSVYLFNFKPTLQLFLGIIVC 296

Query: 199 MMSLHMYFAPPGMLVDIPSTAKAAPD--SLREVSVERRTDS 237
           MMSLHMYFAPP MLVD+P     + D  SL EV  +RRTDS
Sbjct: 297 MMSLHMYFAPPQMLVDLPPPVVKSQDLESLIEVPSDRRTDS 337

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224053803|ref|XP_002297987.1| predicted protein [Populus trichocarpa] gi|222845245|gb|EEE82792.1| predicted protein [Populus trichocarpa]

 Score =  386 bits (992), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 179/211 (84%), Positives = 199/211 (94%)

Query: 27  STLQWMAIVLLAVGTTTSQVKGCGEALCDSLFAAPIQGYLLGVLSACLSALAGVYTEFLM 86
           S LQWMAI+LLAVGTTTSQVKGCGEA CDSLFAAPIQGY+LG +SACLSALAGVYTEFLM
Sbjct: 125 SNLQWMAIILLAVGTTTSQVKGCGEASCDSLFAAPIQGYMLGAVSACLSALAGVYTEFLM 184

Query: 87  KKNNDSLYWQNVQLYTFGAIFNMFRLLLDDFRGGFEKGPWWQRLFDGYNITTWMVVFNLG 146
           KKNNDSLYWQNVQLYTFG+IFN+ RL+LDD+RGG+E G WWQRLF+GY+ITTWMVV NLG
Sbjct: 185 KKNNDSLYWQNVQLYTFGSIFNLARLVLDDYRGGYENGSWWQRLFNGYSITTWMVVLNLG 244

Query: 147 STGLLVSWLMKYADNIIKVYSTSMAMLLTMVLSVYLFNFKPTLQLFLGIIICMMSLHMYF 206
           STGLLVSWLMKYADNI+KVY+TSMAMLLTMV SVYLF+FKPTLQLF GIIICMMSLHMYF
Sbjct: 245 STGLLVSWLMKYADNIVKVYATSMAMLLTMVWSVYLFSFKPTLQLFSGIIICMMSLHMYF 304

Query: 207 APPGMLVDIPSTAKAAPDSLREVSVERRTDS 237
           APP ML+D+P+  +AAP+SL+EV+VERRTDS
Sbjct: 305 APPNMLLDLPTQVRAAPESLKEVTVERRTDS 335

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356506046|ref|XP_003521799.1| PREDICTED: probable UDP-sugar transporter protein SLC35A4-like [Glycine max]

 Score =  384 bits (987), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 181/219 (82%), Positives = 199/219 (90%)

Query: 19  RLFLRRRLSTLQWMAIVLLAVGTTTSQVKGCGEALCDSLFAAPIQGYLLGVLSACLSALA 78
           RLFL RRLS LQWMAIVLLAVGTTTSQV+GCGEA CDS+F+APIQGY+LGVLSACLSALA
Sbjct: 117 RLFLGRRLSNLQWMAIVLLAVGTTTSQVRGCGEASCDSIFSAPIQGYMLGVLSACLSALA 176

Query: 79  GVYTEFLMKKNNDSLYWQNVQLYTFGAIFNMFRLLLDDFRGGFEKGPWWQRLFDGYNITT 138
           G+YTEFLMKKNNDSLYWQN+QLYTFG  FNM RLL DDFRGGFE GPWWQR+F+GY ITT
Sbjct: 177 GIYTEFLMKKNNDSLYWQNIQLYTFGTFFNMARLLADDFRGGFENGPWWQRIFNGYTITT 236

Query: 139 WMVVFNLGSTGLLVSWLMKYADNIIKVYSTSMAMLLTMVLSVYLFNFKPTLQLFLGIIIC 198
           WMVV NLGSTGLLVSWLMK+ADNI+KVYSTSMAMLLTM+LS++LFNFKPTLQLFLGIIIC
Sbjct: 237 WMVVLNLGSTGLLVSWLMKHADNIVKVYSTSMAMLLTMILSLFLFNFKPTLQLFLGIIIC 296

Query: 199 MMSLHMYFAPPGMLVDIPSTAKAAPDSLREVSVERRTDS 237
           MMSLHMYFAPP +L+D P T K   + L EVS++RRT S
Sbjct: 297 MMSLHMYFAPPNLLLDKPLTVKLDEEKLIEVSIDRRTLS 335

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297805474|ref|XP_002870621.1| nucleotide-sugar transporter family protein [Arabidopsis lyrata subsp. lyrata] gi|297316457|gb|EFH46880.1| nucleotide-sugar transporter family protein [Arabidopsis lyrata subsp. lyrata]

 Score =  380 bits (977), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 177/219 (80%), Positives = 200/219 (91%)

Query: 19  RLFLRRRLSTLQWMAIVLLAVGTTTSQVKGCGEALCDSLFAAPIQGYLLGVLSACLSALA 78
           RLFL+R+LS LQWMAI LLAVGTTTSQVKGCGEA CDSLF APIQGYLLG+LSA LSALA
Sbjct: 122 RLFLKRKLSKLQWMAIGLLAVGTTTSQVKGCGEASCDSLFTAPIQGYLLGILSAGLSALA 181

Query: 79  GVYTEFLMKKNNDSLYWQNVQLYTFGAIFNMFRLLLDDFRGGFEKGPWWQRLFDGYNITT 138
           G+YTEFLMK+NND+LYWQN+QLYTFG++FN+ RL+ DDFR GFEKGPWWQR+FDGY+ITT
Sbjct: 182 GIYTEFLMKRNNDTLYWQNLQLYTFGSLFNVARLIADDFRHGFEKGPWWQRIFDGYSITT 241

Query: 139 WMVVFNLGSTGLLVSWLMKYADNIIKVYSTSMAMLLTMVLSVYLFNFKPTLQLFLGIIIC 198
           WMVV NLGSTGLLVSWLMKYADNI+KVYSTSMAMLLTMV S+YLF+FKPTLQLFLGI+IC
Sbjct: 242 WMVVLNLGSTGLLVSWLMKYADNIVKVYSTSMAMLLTMVASIYLFSFKPTLQLFLGIVIC 301

Query: 199 MMSLHMYFAPPGMLVDIPSTAKAAPDSLREVSVERRTDS 237
           +MSLHMYFAPP  LVD+P T +A P  L++V VE +TDS
Sbjct: 302 IMSLHMYFAPPHTLVDLPVTNEAHPKILKQVVVEEKTDS 340

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	237
TAIR|locus:2152955	340	AT5G41760 [Arabidopsis thalian	0.881	0.614	0.803	2.7e-91
TAIR|locus:504955503	352	AT4G35335 [Arabidopsis thalian	0.717	0.482	0.4	4.9e-30
ZFIN|ZDB-GENE-030616-62	347	slc35a2 "solute carrier family	0.831	0.567	0.341	3.8e-23
ZFIN|ZDB-GENE-070424-281	395	si:dkey-83k24.4 "si:dkey-83k24	0.831	0.498	0.341	3.8e-23
TAIR|locus:2040976	406	AT2G43240 [Arabidopsis thalian	0.729	0.426	0.342	1.1e-22
ZFIN|ZDB-GENE-081105-80	328	si:ch211-228b23.2 "si:ch211-22	0.721	0.521	0.344	4.3e-22
TAIR|locus:2081292	405	UTR6 "UDP-galactose transporte	0.738	0.432	0.324	5.6e-22
UNIPROTKB|O77592	326	SLC35A3 "UDP-N-acetylglucosami	0.738	0.536	0.338	9e-22
UNIPROTKB|Q0GA84	325	SLC35A3 "Solute carrier family	0.738	0.538	0.340	9e-22
POMBASE|SPCC1795.03	353	gms1 "UDP-galactose transporte	0.725	0.487	0.326	1.1e-21

TAIR|locus:2152955 AT5G41760 [Arabidopsis thaliana (taxid:3702)]

 Score = 910 (325.4 bits), Expect = 2.7e-91, P = 2.7e-91
 Identities = 168/209 (80%), Positives = 191/209 (91%)

Query:    29 LQWMAIVLLAVGTTTSQVKGCGEALCDSLFAAPIQGYLLGVLSACLSALAGVYTEFLMKK 88
             LQWMAI LLAVGTTTSQVKGCGEA CDSLF APIQGYLLG+LSA LSALAG+YTEFLMK+
Sbjct:   132 LQWMAIGLLAVGTTTSQVKGCGEASCDSLFTAPIQGYLLGILSAGLSALAGIYTEFLMKR 191

Query:    89 NNDSLYWQNVQLYTFGAIFNMFRLLLDDFRGGFEKGPWWQRLFDGYNITTWMVVFNLGST 148
             NND+LYWQN+QLYTFG++FN+ RL+ DDFR GFEKGPWWQR+FDGY+ITTW+VV NLGST
Sbjct:   192 NNDTLYWQNLQLYTFGSLFNVARLIADDFRHGFEKGPWWQRIFDGYSITTWLVVLNLGST 251

Query:   149 GLLVSWLMKYADNIIKVYSTSMAMLLTMVLSVYLFNFKPTLQLFLGIIICMMSLHMYFAP 208
             GLLVSWLMKYADNI+KVYSTSMAMLLTMV S+YLF+FKPTLQLFLGI+IC+MSLHMYFAP
Sbjct:   252 GLLVSWLMKYADNIVKVYSTSMAMLLTMVASIYLFSFKPTLQLFLGIVICIMSLHMYFAP 311

Query:   209 PGMLVDIPSTAKAAPDSLREVSVERRTDS 237
             P  LVD+P T +A   +L++V VE +TDS
Sbjct:   312 PHTLVDLPVTNEAHAKTLKQVVVEEKTDS 340

GO:0000139 "Golgi membrane" evidence=IEA

GO:0005338 "nucleotide-sugar transmembrane transporter activity" evidence=IEA;ISS

GO:0005351 "sugar:hydrogen symporter activity" evidence=IEA

GO:0005456 "CMP-N-acetylneuraminate transmembrane transporter activity" evidence=ISS

GO:0009507 "chloroplast" evidence=ISM

GO:0015780 "nucleotide-sugar transport" evidence=ISS

GO:0016021 "integral to membrane" evidence=IEA

GO:0055085 "transmembrane transport" evidence=ISS;IDA

GO:0015136 "sialic acid transmembrane transporter activity" evidence=IDA

GO:0015739 "sialic acid transport" evidence=IDA

GO:0000394 "RNA splicing, via endonucleolytic cleavage and ligation" evidence=RCA

GO:0009086 "methionine biosynthetic process" evidence=RCA

TAIR|locus:504955503 AT4G35335 [Arabidopsis thaliana (taxid:3702)]

 Score = 332 (121.9 bits), Expect = 4.9e-30, P = 4.9e-30
 Identities = 72/180 (40%), Positives = 108/180 (60%)

Query:    29 LQWMAIVLLAVGTTTSQVKGCGEALCDSLFAAPIQGYLLGVLSACLSALAGVYTEFLMKK 88
             +QW   +LL  G TT+Q+        D +    + G+ + ++ A LS  AGVYTE ++KK
Sbjct:   178 IQWAGFILLCCGCTTAQLNSNS----DRVLQTSLPGWTMAIVMALLSGFAGVYTEAIIKK 233

Query:    89 N-NDSLYWQNVQLYTFGAIFNMFRLLLDDFRGGFEKGPWWQRLFDGYNITTWMVVFNLGS 147
               + ++  QN  LY FG  FN   +++ DF     KG      F GY+  T +++ N   
Sbjct:   234 RPSRNINVQNFWLYVFGMAFNAVAIVIQDFDAVANKG-----FFHGYSFITLLMILNHAL 288

Query:   148 TGLLVSWLMKYADNIIKVYSTSMAMLLTMVLSVYLFNFKPTLQLFLGIIICMMSLHMYFA 207
             +G+ VS +MKYADNI+KVYSTS+AMLLT V+SV+LFNF  +L  FLG  +  +S++++ A
Sbjct:   289 SGIAVSMVMKYADNIVKVYSTSVAMLLTAVVSVFLFNFHLSLAFFLGSTVVSVSVYLHSA 348

GO:0000139 "Golgi membrane" evidence=IEA

GO:0005338 "nucleotide-sugar transmembrane transporter activity" evidence=IEA;ISS

GO:0005351 "sugar:hydrogen symporter activity" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM

GO:0008643 "carbohydrate transport" evidence=IEA

GO:0015780 "nucleotide-sugar transport" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0055085 "transmembrane transport" evidence=IEA;ISS

GO:0016020 "membrane" evidence=ISS

GO:0005794 "Golgi apparatus" evidence=IDA

GO:0006007 "glucose catabolic process" evidence=RCA

GO:0005768 "endosome" evidence=IDA

GO:0005802 "trans-Golgi network" evidence=IDA

ZFIN|ZDB-GENE-030616-62 slc35a2 "solute carrier family 35 (UDP-galactose transporter), member 2" [Danio rerio (taxid:7955)]

 Score = 267 (99.0 bits), Expect = 3.8e-23, P = 3.8e-23
 Identities = 71/208 (34%), Positives = 116/208 (55%)

Query:    29 LQWMAIVLLAVGTTTSQVKGCGEALCDSLFAAPIQGYLLGVLS---ACLSA-LAGVYTEF 84
             +QW+++VLL  G    QV+       +++ AA  Q Y  G+LS   +CLS+  AGVY E 
Sbjct:   137 IQWISLVLLFAGVAIVQVEQESGKQKEAVTAAN-QNYFKGLLSVIISCLSSGFAGVYFEK 195

Query:    85 LMKKNNDSLYWQNVQLYTFGAIFNMFRLLLDDFRGGFEKGPWWQRLFDGYNITTWMVVFN 144
             ++K ++ S++ +N+QL  FG +  +  +  +D     EKG     LF GY    W V+FN
Sbjct:   196 ILKGSSASVWMRNIQLGIFGTVLGLLGMWWNDGAAIAEKG----FLF-GYTPMVWGVIFN 250

Query:   145 LGSTGLLVSWLMKYADNIIKVYSTSMAMLLTMVLSVYLFNFKPTLQLFLGIIICMMSLHM 204
                 GLLV+ ++KYADNI+K ++TS +++++ + SVYLF F   L   LG  + + +++M
Sbjct:   251 QAFGGLLVAVVVKYADNILKGFATSFSIIVSTITSVYLFGFHVDLVFTLGAGLVIGAVYM 310

Query:   205 YFAPPGMLVDIPSTAKAAPDSLREVSVE 232
             Y  P        ST+ A+     E  ++
Sbjct:   311 YSLPKAN-TSTSSTSTASSSKAGESELD 337

GO:0005338 "nucleotide-sugar transmembrane transporter activity" evidence=IEA

GO:0015780 "nucleotide-sugar transport" evidence=IEA

GO:0005351 "sugar:hydrogen symporter activity" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0000139 "Golgi membrane" evidence=IEA

GO:0008643 "carbohydrate transport" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0006810 "transport" evidence=IEA

ZFIN|ZDB-GENE-070424-281 si:dkey-83k24.4 "si:dkey-83k24.4" [Danio rerio (taxid:7955)]

 Score = 267 (99.0 bits), Expect = 3.8e-23, P = 3.8e-23
 Identities = 71/208 (34%), Positives = 116/208 (55%)

Query:    29 LQWMAIVLLAVGTTTSQVKGCGEALCDSLFAAPIQGYLLGVLS---ACLSA-LAGVYTEF 84
             +QW+++VLL  G    QV+       +++ AA  Q Y  G+LS   +CLS+  AGVY E 
Sbjct:   164 IQWISLVLLFAGVAIVQVEQESGKQKEAVTAAN-QNYFKGLLSVIISCLSSGFAGVYFEK 222

Query:    85 LMKKNNDSLYWQNVQLYTFGAIFNMFRLLLDDFRGGFEKGPWWQRLFDGYNITTWMVVFN 144
             ++K ++ S++ +N+QL  FG +  +  +  +D     EKG     LF GY    W V+FN
Sbjct:   223 ILKGSSASVWMRNIQLGIFGTVLGLLGMWWNDGAAIAEKG----FLF-GYTPMVWGVIFN 277

Query:   145 LGSTGLLVSWLMKYADNIIKVYSTSMAMLLTMVLSVYLFNFKPTLQLFLGIIICMMSLHM 204
                 GLLV+ ++KYADNI+K ++TS +++++ + SVYLF F   L   LG  + + +++M
Sbjct:   278 QAFGGLLVAVVVKYADNILKGFATSFSIIVSTITSVYLFGFHVDLVFTLGAGLVIGAVYM 337

Query:   205 YFAPPGMLVDIPSTAKAAPDSLREVSVE 232
             Y  P        ST+ A+     E  ++
Sbjct:   338 YSLPKAN-TSTSSTSTASSSKAGESELD 364

GO:0005351 "sugar:hydrogen symporter activity" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0000139 "Golgi membrane" evidence=IEA

GO:0008643 "carbohydrate transport" evidence=IEA

GO:0005338 "nucleotide-sugar transmembrane transporter activity" evidence=IEA

GO:0015780 "nucleotide-sugar transport" evidence=IEA

GO:0006810 "transport" evidence=IEA

GO:0016020 "membrane" evidence=IEA

TAIR|locus:2040976 AT2G43240 [Arabidopsis thaliana (taxid:3702)]

 Score = 264 (98.0 bits), Expect = 1.1e-22, P = 1.1e-22
 Identities = 63/184 (34%), Positives = 100/184 (54%)

Query:    29 LQWMAIVLLAVGTTTSQVKGCGEALCDSLFAAPIQ--GYLLGVLSACLSALAGVYTEFLM 86
             +QW A+ LL +G + +Q++   E    +  A PI    Y+   +   + +LA VY E+ +
Sbjct:   176 IQWEALALLLIGISINQLRSLPEGA--TTVAVPIATGAYICTFIFVTVPSLASVYNEYAL 233

Query:    87 KKNND-SLYWQNVQLYTFGAIFNMFRLLLDDFRGG-FEKGPWWQRLFDGYNITTWMVVFN 144
             K   D S+Y QN+ LY +GAIFN   +L     G    KGP    +  G++  T  ++ N
Sbjct:   234 KSQYDTSIYLQNLFLYGYGAIFNFLGIL-----GTVIYKGPGSFDILQGHSRATMFLILN 288

Query:   145 LGSTGLLVSWLMKYADNIIKVYSTSMAMLLTMVLSVYLFNFKPTLQLFLGIIICMMSLHM 204
               + G+L S+  KYAD I+K YS+++A + T + S  LF    T+   LGI I  +S+H 
Sbjct:   289 NAAQGILSSFFFKYADTILKKYSSTVATIFTGIASAALFGHILTMNFLLGISIVFISMHQ 348

Query:   205 YFAP 208
             +F+P
Sbjct:   349 FFSP 352

GO:0000139 "Golgi membrane" evidence=IEA

GO:0005338 "nucleotide-sugar transmembrane transporter activity" evidence=ISS

GO:0005351 "sugar:hydrogen symporter activity" evidence=IEA

GO:0008643 "carbohydrate transport" evidence=IEA

GO:0015780 "nucleotide-sugar transport" evidence=ISS

GO:0016021 "integral to membrane" evidence=IEA

GO:0055085 "transmembrane transport" evidence=ISS

ZFIN|ZDB-GENE-081105-80 si:ch211-228b23.2 "si:ch211-228b23.2" [Danio rerio (taxid:7955)]

 Score = 257 (95.5 bits), Expect = 4.3e-22, P = 4.3e-22
 Identities = 62/180 (34%), Positives = 105/180 (58%)

Query:    30 QWMAIVLLAVGTTTSQ--VKGCGEALCDSLFAAPIQGYLLGVLSACLSA-LAGVYTEFLM 86
             QW+++++L  G    Q       +   + L A      L+ VL AC S+  AGVY E ++
Sbjct:   141 QWLSLLILMAGVAFVQWPTDSPADPQKEHLTAGSQFVGLVAVLVACCSSGFAGVYFEKIL 200

Query:    87 KKNNDSLYWQNVQLYTFGAIFNMFRLLLDDFRGGFEKGPWWQRLFDGYNITTWMVVFNLG 146
             K+   S++ +N+QL  FG +F +F +L  D     E G     +F GYN  TW+VV    
Sbjct:   201 KETKQSVWVRNIQLGLFGLVFGVFGMLAYDGDRVREHG-----MFQGYNTLTWIVVALQA 255

Query:   147 STGLLVSWLMKYADNIIKVYSTSMAMLLTMVLSVYLF-NFKPTLQLFLGIIICMMSLHMY 205
               GL+++ ++KYADNI+K ++TS++++L+ ++S +L  +F+PT   FLG I+ +M+  +Y
Sbjct:   256 LGGLVIAAVIKYADNILKGFATSLSIILSTLISYFLLEDFEPTSVFFLGAILVIMATFLY 315

GO:0005351 "sugar:hydrogen symporter activity" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0000139 "Golgi membrane" evidence=IEA

GO:0008643 "carbohydrate transport" evidence=IEA

GO:0005338 "nucleotide-sugar transmembrane transporter activity" evidence=IEA

GO:0015780 "nucleotide-sugar transport" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0006810 "transport" evidence=IEA

TAIR|locus:2081292 UTR6 "UDP-galactose transporter 6" [Arabidopsis thaliana (taxid:3702)]

 Score = 258 (95.9 bits), Expect = 5.6e-22, P = 5.6e-22
 Identities = 59/182 (32%), Positives = 97/182 (53%)

Query:    29 LQWMAIVLLAVGTTTSQVKGCGEALCDSLFAAPIQGYLLGVLSACLSALAGVYTEFLMKK 88
             +QW A+ LL +G + +Q++   E             Y+  V+   + ++A V+ E+ +K 
Sbjct:   174 IQWEALALLLIGISVNQLRSLPEGATAIGIPLATGAYVCTVIFVTVPSMASVFNEYALKS 233

Query:    89 NND-SLYWQNVQLYTFGAIFNMFRLLLDDFRGG-FEKGPWWQRLFDGYNITTWMVVFNLG 146
               D S+Y QN+ LY +GAIFN   +L     G    KGP    +  G++  T  ++ N  
Sbjct:   234 QYDTSIYLQNLFLYGYGAIFNFLGIL-----GTVIYKGPGSFDILQGHSRATMFLILNNA 288

Query:   147 STGLLVSWLMKYADNIIKVYSTSMAMLLTMVLSVYLFNFKPTLQLFLGIIICMMSLHMYF 206
             + G+L S+  KYAD I+K YS+++A + T + S  LF    T+   LGI I  +S+H +F
Sbjct:   289 AQGILSSFFFKYADTILKKYSSTVATIFTGIASAALFGHVITMNFLLGISIVFISMHQFF 348

Query:   207 AP 208
             +P
Sbjct:   349 SP 350

GO:0000139 "Golgi membrane" evidence=IEA

GO:0005338 "nucleotide-sugar transmembrane transporter activity" evidence=ISS

GO:0005351 "sugar:hydrogen symporter activity" evidence=IEA

GO:0008643 "carbohydrate transport" evidence=IEA

GO:0009507 "chloroplast" evidence=ISM

GO:0015780 "nucleotide-sugar transport" evidence=ISS

GO:0016021 "integral to membrane" evidence=IEA

GO:0055085 "transmembrane transport" evidence=ISS

GO:0005794 "Golgi apparatus" evidence=IDA

UNIPROTKB|O77592 SLC35A3 "UDP-N-acetylglucosamine transporter" [Canis lupus familiaris (taxid:9615)]

 Score = 254 (94.5 bits), Expect = 9.0e-22, P = 9.0e-22
 Identities = 62/183 (33%), Positives = 105/183 (57%)

Query:    30 QWMAIVLLAVGTTTSQVKGCGEALCDSLFAAPIQGY-LLGVLSACLSA-LAGVYTEFLMK 87
             QW+++V+L  G    Q     + L     +A  Q   L+ VL+AC S+  AGVY E ++K
Sbjct:   140 QWLSLVILMTGVAFVQWPSDSQELDSKELSAGSQFVGLMAVLTACFSSGFAGVYFEKILK 199

Query:    88 KNNDSLYWQNVQLYTFGAIFNMFRLLLDDFRGGFEKGPWWQRLFDGYNITTWMVVFNLGS 147
             +   S++ +N+QL  FG+IF +  + + D     + G      F GYN  TW+VV     
Sbjct:   200 ETKQSVWIRNIQLGFFGSIFGLMGVYIYDGELVSKNG-----FFQGYNRLTWIVVILQAL 254

Query:   148 TGLLVSWLMKYADNIIKVYSTSMAMLLTMVLSVY-LFNFKPTLQLFLGIIICMMSLHMYF 206
              GL+++ ++KYADNI+K ++TS++++L+ ++S + L +F PT   FLG I+ + +  +Y 
Sbjct:   255 GGLVIAAVIKYADNILKGFATSLSIILSTLISYFWLQDFVPTSVFFLGAILVITATFLYG 314

Query:   207 APP 209
               P
Sbjct:   315 YDP 317

GO:0000139 "Golgi membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0015780 "nucleotide-sugar transport" evidence=IEA

GO:0005351 "sugar:hydrogen symporter activity" evidence=IEA

GO:0005338 "nucleotide-sugar transmembrane transporter activity" evidence=IEA

UNIPROTKB|Q0GA84 SLC35A3 "Solute carrier family 35 member A3" [Sus scrofa (taxid:9823)]

 Score = 254 (94.5 bits), Expect = 9.0e-22, P = 9.0e-22
 Identities = 62/182 (34%), Positives = 104/182 (57%)

Query:    30 QWMAIVLLAVGTTTSQVKGCGEALCDSLFAAPIQGYLLGVLSACLSA-LAGVYTEFLMKK 88
             QW+++V+L  G    Q     + L   L A      L+ VL+AC S+  AGVY E ++K+
Sbjct:   140 QWLSLVILMTGVAFVQWPSDSQELEKELSAGSQFVGLMAVLTACFSSGFAGVYFEKILKE 199

Query:    89 NNDSLYWQNVQLYTFGAIFNMFRLLLDDFRGGFEKGPWWQRLFDGYNITTWMVVFNLGST 148
                S++ +N+QL  FG+IF +  + + D     + G      F GYN  TW+VV      
Sbjct:   200 TKQSVWIRNIQLGFFGSIFGLMGVYIYDGELVSKNG-----FFQGYNRLTWIVVVLQALG 254

Query:   149 GLLVSWLMKYADNIIKVYSTSMAMLLTMVLSVY-LFNFKPTLQLFLGIIICMMSLHMYFA 207
             GL+++ ++KYADNI+K ++TS++++L+ ++S + L +F PT   FLG I+ + +  +Y  
Sbjct:   255 GLVIAAVIKYADNILKGFATSLSIILSTLISYFWLQDFVPTSVFFLGAILVITATFLYGY 314

Query:   208 PP 209
              P
Sbjct:   315 DP 316

GO:0016021 "integral to membrane" evidence=IEA

GO:0015780 "nucleotide-sugar transport" evidence=IEA

GO:0005351 "sugar:hydrogen symporter activity" evidence=IEA

GO:0005338 "nucleotide-sugar transmembrane transporter activity" evidence=IEA

GO:0000139 "Golgi membrane" evidence=IEA

POMBASE|SPCC1795.03 gms1 "UDP-galactose transporter Gms1" [Schizosaccharomyces pombe (taxid:4896)]

 Score = 253 (94.1 bits), Expect = 1.1e-21, P = 1.1e-21
 Identities = 60/184 (32%), Positives = 102/184 (55%)

Query:    29 LQWMAIVLLAVGTTTSQVKGCGEALCDSLFAAP---IQGYLLGVLSACL-SALAGVYTEF 84
             ++W ++ LL  G    Q++       D + A P   + G+   VL ACL S LAGVY E 
Sbjct:   150 MKWFSLFLLTGGIAIVQLQNLNSD--DQMSAGPMNPVTGFS-AVLVACLISGLAGVYFEK 206

Query:    85 LMKKNNDSLYWQNVQLYTFGAIFNMFRLLLDDFRGGFEKGPWWQRLFDGYNITTWMVVFN 144
             ++K  N SL+ +NVQL  F     +F +L+ D+    E G      F GYN   W+ +  
Sbjct:   207 VLKDTNPSLWVRNVQLSFFSLFPCLFTILMKDYHNIAENG-----FFFGYNSIVWLAILL 261

Query:   145 LGSTGLLVSWLMKYADNIIKVYSTSMAMLLTMVLSVYLFNFKPTLQLFLGIIICMMSLHM 204
                 G++V+  + +ADNI+K +STS++++++ + SVYL +FK +L   +G+++ + +  +
Sbjct:   262 QAGGGIIVALCVAFADNIMKNFSTSISIIISSLASVYLMDFKISLTFLIGVMLVIAATFL 321

Query:   205 YFAP 208
             Y  P
Sbjct:   322 YTKP 325

GO:0000139 "Golgi membrane" evidence=IDA

GO:0000747 "conjugation with cellular fusion" evidence=IMP

GO:0005351 "sugar:hydrogen symporter activity" evidence=IEA

GO:0005459 "UDP-galactose transmembrane transporter activity" evidence=IMP

GO:0006012 "galactose metabolic process" evidence=IMP

GO:0009311 "oligosaccharide metabolic process" evidence=IMP

GO:0016021 "integral to membrane" evidence=IEA

GO:0042125 "protein galactosylation" evidence=IMP

GO:0051070 "galactomannan biosynthetic process" evidence=IMP

GO:0072334 "UDP-galactose transmembrane transport" evidence=IMP

GO:1901134 "negative regulation of coflocculation via protein-carbohydrate interaction" evidence=IMP

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q8LGE9	CSTR1_ARATH	No assigned EC number	0.7990	0.9240	0.6441	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: estExt_fgenesh4_pg.C_LG_III1135 hypothetical protein (335 aa) (Populus trichocarpa)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	237
pfam04142	238	pfam04142, Nuc_sug_transp, Nucleotide-sugar transp	2e-40
TIGR00803	222	TIGR00803, nst, UDP-galactose transporter	1e-21

>gnl|CDD|217924 pfam04142, Nuc_sug_transp, Nucleotide-sugar transporter

 Score =  138 bits (350), Expect = 2e-40
 Identities = 74/184 (40%), Positives = 102/184 (55%), Gaps = 11/184 (5%)

Query: 17  FSRLFLRRRLSTLQWMAIVLLAVGTTTSQVKGCGEALCDSLFAAPIQGYLLG---VLSAC 73
           FS L L R+LS  QW +++LL +G    Q+            A   Q   LG   VL+AC
Sbjct: 60  FSVLMLGRKLSWYQWASLLLLFLGVAIVQLDQKSSETNSKRGAE--QNPGLGLSAVLAAC 117

Query: 74  L-SALAGVYTEFLMKKNNDSLYWQNVQLYTFGAIFNMFRLLLDDFRGGFEKGPWWQRLFD 132
             S  AGVY E ++K +N S++ +N+QLY FG  F +    L D     EKG      F 
Sbjct: 118 FTSGFAGVYFEKILKGSNTSIWIRNIQLYFFGIFFALLTCWLYDGSAISEKG-----FFF 172

Query: 133 GYNITTWMVVFNLGSTGLLVSWLMKYADNIIKVYSTSMAMLLTMVLSVYLFNFKPTLQLF 192
           GY    W VV      GL+V+ ++KYADNI+K ++TS+A++L+ V SV LF+F+PTL   
Sbjct: 173 GYTAFVWAVVLLQAVGGLVVAVVVKYADNILKGFATSLAIILSTVASVLLFDFRPTLTFL 232

Query: 193 LGII 196
           LG I
Sbjct: 233 LGAI 236

This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles. Human SLC35A1 transports CMP-sialic acid, SLC35A2 transports UDP-galactose and SLC35A3 transports UDP-GlcNAc. Length = 238

>gnl|CDD|129885 TIGR00803, nst, UDP-galactose transporter

 Score = 89.0 bits (221), Expect = 1e-21
 Identities = 54/195 (27%), Positives = 85/195 (43%), Gaps = 19/195 (9%)

Query: 17  FSRLFLRRRLSTLQWMAIVLL-----AVGTTTSQVKGCGEALCDSLFAAPIQGYLLGVLS 71
            +   L   L   QW ++ LL      V    S  K           +A        VLS
Sbjct: 41  MTLGSLVASLGDDQWFSLKLLKLGVAIVQMVQSSAKTLMFGNPVVGLSA--------VLS 92

Query: 72  ACLSA-LAGVYTEFLMKKNNDSLYWQNVQLYTFGAIFNMFRLLLDDFRGGFEKGPWWQRL 130
           A LS+  AGVY E ++K  +   + +N+QL  FG       LL  D       G      
Sbjct: 93  ALLSSGFAGVYFEKILKDGDTMFWSRNLQLPLFGLFSTFSVLLWSDGTLISNFG-----F 147

Query: 131 FDGYNITTWMVVFNLGSTGLLVSWLMKYADNIIKVYSTSMAMLLTMVLSVYLFNFKPTLQ 190
           F GY    W+V       GL +  +++YADN  K + T+++++L+ + SV LF+ K +  
Sbjct: 148 FIGYPTAVWIVGLLNVGGGLCIGGVVRYADNTTKSFVTALSIILSTLASVRLFDAKISST 207

Query: 191 LFLGIIICMMSLHMY 205
            +LG I+  ++  +Y
Sbjct: 208 FYLGAILVFLATFLY 222

The 10-12 TMS Nucleotide Sugar Transporters (TC 2.A.7.10)Nucleotide-sugar transporters (NSTs) are found in the Golgi apparatus and the endoplasmic reticulum of eukaryotic cells. Members of the family have been sequenced from yeast, protozoans and animals. Animals such as C. elegans possess many of these transporters. Humans have at least two closely related isoforms of the UDP-galactose:UMP exchange transporter.NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids. Length = 222

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	237
KOG2234	345	consensus Predicted UDP-galactose transporter [Car	100.0
PF04142	244	Nuc_sug_transp: Nucleotide-sugar transporter; Inte	100.0
TIGR00803	222	nst UDP-galactose transporter. NSTs generally appe	99.94
KOG1583	330	consensus UDP-N-acetylglucosamine transporter [Car	99.85
PF06027	334	DUF914: Eukaryotic protein of unknown function (DU	99.84
PF08449	303	UAA: UAA transporter family; InterPro: IPR013657 T	99.8
PTZ00343	350	triose or hexose phosphate/phosphate translocator;	99.68
PLN00411	358	nodulin MtN21 family protein; Provisional	99.64
TIGR00817	302	tpt Tpt phosphate/phosphoenolpyruvate translocator	99.61
PRK11453	299	O-acetylserine/cysteine export protein; Provisiona	99.58
PRK11689	295	aromatic amino acid exporter; Provisional	99.57
TIGR00950	260	2A78 Carboxylate/Amino Acid/Amine Transporter.	99.55
PRK11272	292	putative DMT superfamily transporter inner membran	99.54
PRK15430	296	putative chloramphenical resistance permease RarD;	99.42
KOG1580	337	consensus UDP-galactose transporter related protei	99.36
TIGR03340	281	phn_DUF6 phosphonate utilization associated putati	99.33
KOG1581	327	consensus UDP-galactose transporter related protei	99.3
COG0697	292	RhaT Permeases of the drug/metabolite transporter	99.3
KOG1441	316	consensus Glucose-6-phosphate/phosphate and phosph	99.2
PRK10532	293	threonine and homoserine efflux system; Provisiona	99.2
KOG3912	372	consensus Predicted integral membrane protein [Gen	99.08
KOG2766	336	consensus Predicted membrane protein [Function unk	99.03
PF03151	153	TPT: Triose-phosphate Transporter family; InterPro	99.03
KOG1582	367	consensus UDP-galactose transporter related protei	99.0
COG2962	293	RarD Predicted permeases [General function predict	98.79
KOG2765	416	consensus Predicted membrane protein [Function unk	98.78
TIGR00688	256	rarD rarD protein. This uncharacterized protein is	98.71
TIGR00776	290	RhaT RhaT L-rhamnose-proton symporter family prote	98.71
KOG4510	346	consensus Permease of the drug/metabolite transpor	98.64
KOG1443	349	consensus Predicted integral membrane protein [Fun	98.61
KOG1442	347	consensus GDP-fucose transporter [Carbohydrate tra	98.53
KOG1444	314	consensus Nucleotide-sugar transporter VRG4/SQV-7	98.45
PF06800	269	Sugar_transport: Sugar transport protein; InterPro	97.98
COG2510	140	Predicted membrane protein [Function unknown]	97.94
KOG4314	290	consensus Predicted carbohydrate/phosphate translo	97.93
PF00892	126	EamA: EamA-like transporter family; InterPro: IPR0	97.93
PRK02971	129	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	97.87
TIGR03340	281	phn_DUF6 phosphonate utilization associated putati	97.64
COG5070	309	VRG4 Nucleotide-sugar transporter [Carbohydrate tr	97.49
PF13536	113	EmrE: Multidrug resistance efflux transporter	97.45
PF05653	300	Mg_trans_NIPA: Magnesium transporter NIPA; InterPr	97.12
PRK15051	111	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	97.11
PRK15430	296	putative chloramphenical resistance permease RarD;	97.09
PRK10452	120	multidrug efflux system protein MdtJ; Provisional	97.07
PF08449	303	UAA: UAA transporter family; InterPro: IPR013657 T	96.96
PRK09541	110	emrE multidrug efflux protein; Reviewed	96.92
COG5006	292	rhtA Threonine/homoserine efflux transporter [Amin	96.56
TIGR00688	256	rarD rarD protein. This uncharacterized protein is	96.52
PF13536	113	EmrE: Multidrug resistance efflux transporter	96.45
PF05653	300	Mg_trans_NIPA: Magnesium transporter NIPA; InterPr	96.09
COG2510	140	Predicted membrane protein [Function unknown]	96.08
PRK10650	109	multidrug efflux system protein MdtI; Provisional	96.0
PTZ00343	350	triose or hexose phosphate/phosphate translocator;	95.79
TIGR00817	302	tpt Tpt phosphate/phosphoenolpyruvate translocator	95.77
PRK15051	111	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	95.76
COG2076	106	EmrE Membrane transporters of cations and cationic	95.59
PF04142	244	Nuc_sug_transp: Nucleotide-sugar transporter; Inte	95.59
PRK11431	105	multidrug efflux system protein; Provisional	95.52
PF00892	126	EamA: EamA-like transporter family; InterPro: IPR0	95.34
PRK11272	292	putative DMT superfamily transporter inner membran	95.27
TIGR00776	290	RhaT RhaT L-rhamnose-proton symporter family prote	95.19
PRK10452	120	multidrug efflux system protein MdtJ; Provisional	95.06
TIGR00950	260	2A78 Carboxylate/Amino Acid/Amine Transporter.	95.05
PLN00411	358	nodulin MtN21 family protein; Provisional	94.91
COG2076	106	EmrE Membrane transporters of cations and cationic	94.86
PRK13499	345	rhamnose-proton symporter; Provisional	94.85
PRK11689	295	aromatic amino acid exporter; Provisional	94.7
PRK11453	299	O-acetylserine/cysteine export protein; Provisiona	94.69
PF06027	334	DUF914: Eukaryotic protein of unknown function (DU	94.57
COG0697	292	RhaT Permeases of the drug/metabolite transporter	94.55
PRK09541	110	emrE multidrug efflux protein; Reviewed	94.49
PF04657	138	DUF606: Protein of unknown function, DUF606; Inter	94.32
PF00893	93	Multi_Drug_Res: Small Multidrug Resistance protein	94.2
PRK02971	129	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	94.09
PRK11431	105	multidrug efflux system protein; Provisional	94.04
PRK10650	109	multidrug efflux system protein MdtI; Provisional	93.63
PF10639	113	UPF0546: Uncharacterised protein family UPF0546; I	92.61
KOG2922	335	consensus Uncharacterized conserved protein [Funct	92.56
PRK13499	345	rhamnose-proton symporter; Provisional	91.11
TIGR00803	222	nst UDP-galactose transporter. NSTs generally appe	89.19
PF04342	108	DUF486: Protein of unknown function, DUF486; Inter	88.37
PF10639	113	UPF0546: Uncharacterised protein family UPF0546; I	86.85
PF06379	344	RhaT: L-rhamnose-proton symport protein (RhaT); In	85.65
COG2962	293	RarD Predicted permeases [General function predict	84.12
KOG1580	337	consensus UDP-galactose transporter related protei	83.52
COG3169	116	Uncharacterized protein conserved in bacteria [Fun	83.48
COG3238	150	Uncharacterized protein conserved in bacteria [Fun	83.13
KOG2922	335	consensus Uncharacterized conserved protein [Funct	82.74
KOG1581	327	consensus UDP-galactose transporter related protei	82.46
PF07857	254	DUF1632: CEO family (DUF1632); InterPro: IPR012435	81.82

>KOG2234 consensus Predicted UDP-galactose transporter [Carbohydrate transport and metabolism]

Probab=100.00  E-value=2e-44  Score=315.22  Aligned_cols=206  Identities=39%  Similarity=0.600  Sum_probs=185.3

Q ss_pred             HHHHHHHHHhcCCCCHHHHHHHHHHHHHHhhhcccCCCcccc--CcccccchhHHHHHHHHHHHHHHHHHHHHHHhhcCC
Q 026565           13 FSLKFSRLFLRRRLSTLQWMAIVLLAVGTTTSQVKGCGEALC--DSLFAAPIQGYLLGVLSACLSALAGVYTEFLMKKNN   90 (237)
Q Consensus        13 ~tall~~~~L~~~ls~~qw~al~ll~~Gv~l~~~~~~~~~~~--~~~~~~~~~G~~~~l~~a~~sa~a~vy~E~~~K~~~   90 (237)
                      .||++++++|+||++++||.|+++++.|+.++|.+..++.+.  +...++++.|+.+++.+|++||+||+|+||++|+.+
T Consensus       131 tTA~f~vl~L~rkLs~~Qw~Al~lL~~Gv~~vQ~~~~~~~~a~~~~~~~n~~~G~~avl~~c~~SgfAgvYfEkiLK~s~  210 (345)
T KOG2234|consen  131 TTAIFSVLILRRKLSRLQWMALVLLFAGVALVQLPSLSPTGAKSESSAQNPFLGLVAVLVACFLSGFAGVYFEKILKGSN  210 (345)
T ss_pred             HHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHhccCCCCCCccCCCcccchhhhHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence            899999999999999999999999999999999655433222  234578899999999999999999999999999999


Q ss_pred             chhHHHHHHHHHHHHHHHHHHHHhhccccccccCccccccccccchHHHHHHHHHHHhhhhhhhhhhhhhHHHHHHHHHH
Q 026565           91 DSLYWQNVQLYTFGAIFNMFRLLLDDFRGGFEKGPWWQRLFDGYNITTWMVVFNLGSTGLLVSWLMKYADNIIKVYSTSM  170 (237)
Q Consensus        91 ~~~~~~n~~L~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~il~~a~~Gl~va~vlk~~d~i~k~~a~s~  170 (237)
                      .++|+||+|||++|++++++..+..|++.+..     .++|+||++.+|+++++|+.||+++++++||+||++|+|++++
T Consensus       211 ~s~wi~NiqL~~~g~~f~~l~~~~~d~~~i~~-----~gff~G~s~~vw~vVl~~a~gGLlvs~v~KyADnIlK~f~~s~  285 (345)
T KOG2234|consen  211 VSLWIRNIQLYFFGILFNLLTILLQDGEAINE-----YGFFYGYSSIVWLVVLLNAVGGLLVSLVMKYADNILKGFSTSV  285 (345)
T ss_pred             chHHHHHHHHHHHHHHHHHHHHhhcccccccc-----CCccccccHHHHHHHHHHhccchhHHHHHHHhHHHHHHHHHHH
Confidence            99999999999999999999999988877652     4699999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHcCCCccHHHHHHHHHHHHHhHhccCCCCCCCCCCCcCcCCCc
Q 026565          171 AMLLTMVLSVYLFNFKPTLQLFLGIIICMMSLHMYFAPPGMLVDIPSTAKAAPD  224 (237)
Q Consensus       171 siv~s~lls~~~f~~~~t~~~~vG~~lV~~s~~lY~~~~~~~~~~~~~~~~~~~  224 (237)
                      +++++.+.|+++||.++|..+++|+.+|+.|+++|+..|++. +.|++.|+++.
T Consensus       286 aiilt~v~S~~Lf~~~~t~~F~lG~~lVi~Si~lY~~~P~~~-~~~~~~~~~~~  338 (345)
T KOG2234|consen  286 AIILTTVASIALFDFQLTLYFLLGALLVILSIFLYSLYPARD-AQKNYNPLEAQ  338 (345)
T ss_pred             HHHHHHHHHHHHccCCchHHHHHHHHHHHHHHHHhhcCCccc-ccccCCCCccc
Confidence            999999999999999999999999999999999999888865 43444444443

>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles

Probab=100.00  E-value=4.7e-39  Score=275.56  Aligned_cols=181  Identities=43%  Similarity=0.715  Sum_probs=165.7

Q ss_pred             HHHHHHHHHhcCCCCHHHHHHHHHHHHHHhhhcccCCCccccC--------cccccchhHHHHHHHHHHHHHHHHHHHHH
Q 026565           13 FSLKFSRLFLRRRLSTLQWMAIVLLAVGTTTSQVKGCGEALCD--------SLFAAPIQGYLLGVLSACLSALAGVYTEF   84 (237)
Q Consensus        13 ~tall~~~~L~~~ls~~qw~al~ll~~Gv~l~~~~~~~~~~~~--------~~~~~~~~G~~~~l~~a~~sa~a~vy~E~   84 (237)
                      +||++++++||||++++||.|++++++|+++++.++...++.+        ....++..|++++++++++||+++||+||
T Consensus        56 ~TAl~s~~~L~r~ls~~qW~aL~lL~~Gv~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~vl~~~~~S~~agVy~E~  135 (244)
T PF04142_consen   56 FTALFSVLLLKRRLSRRQWLALFLLVAGVVLVQLSSSQSSDNSSSSSVHHDASNQNPLLGLLAVLAAAFLSGFAGVYFEK  135 (244)
T ss_pred             HHHHHHHHHHHcccchhhHHHHHHHHHHHheeecCCccccccccccccccccccchhHhHHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999999999999999999999999998776542111        11346789999999999999999999999


Q ss_pred             HhhcCCchhHHHHHHHHHHHHHHHHHHHHhhccccccccCccccccccccchHHHHHHHHHHHhhhhhhhhhhhhhHHHH
Q 026565           85 LMKKNNDSLYWQNVQLYTFGAIFNMFRLLLDDFRGGFEKGPWWQRLFDGYNITTWMVVFNLGSTGLLVSWLMKYADNIIK  164 (237)
Q Consensus        85 ~~K~~~~~~~~~n~~L~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~il~~a~~Gl~va~vlk~~d~i~k  164 (237)
                      ++|+++.++|.||+|||.+|++++++.....|+..+.++|     +|+||++++|.+++.++++|++++.++||+||++|
T Consensus       136 ~lK~~~~s~~~~N~qL~~~gi~~~~~~~~~~~~~~~~~~g-----~f~G~~~~~~~~i~~~a~gGllva~v~KyadnI~K  210 (244)
T PF04142_consen  136 LLKRSNVSLWIQNMQLYLFGILFNLLALLLSDGSAISESG-----FFHGYSWWVWIVIFLQAIGGLLVAFVLKYADNIVK  210 (244)
T ss_pred             HhcccchhHHHHHHHHHHHHHHHHHHHHhcccccccccCC-----chhhcchHHHHHHHHHHHhhHHHHHHHHHHhHHHH
Confidence            9999999999999999999999999988788877666655     99999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHcCCCccHHHHHHHHHH
Q 026565          165 VYSTSMAMLLTMVLSVYLFNFKPTLQLFLGIIIC  198 (237)
Q Consensus       165 ~~a~s~siv~s~lls~~~f~~~~t~~~~vG~~lV  198 (237)
                      +|+++++++++.++|+++||.++|..+++|+.+|
T Consensus       211 ~fa~a~siv~t~~~s~~lf~~~~s~~f~lg~~~V  244 (244)
T PF04142_consen  211 GFATAVSIVLTAVLSVLLFGFPPSLSFLLGAALV  244 (244)
T ss_pred             HHHHHHHHHHHHHHHHHHhCCCCchHHhhheecC
Confidence            9999999999999999999999999999998875

P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane

>TIGR00803 nst UDP-galactose transporter

Probab=99.94  E-value=8e-26  Score=190.99  Aligned_cols=186  Identities=26%  Similarity=0.399  Sum_probs=145.4

Q ss_pred             HHHHHHHHHhcCCCCHHHHHHHHHHHHHHhhhcccCCCccccCcccccchhHHHHHHHHHHHHHHHHHHHHHHhhcCCch
Q 026565           13 FSLKFSRLFLRRRLSTLQWMAIVLLAVGTTTSQVKGCGEALCDSLFAAPIQGYLLGVLSACLSALAGVYTEFLMKKNNDS   92 (237)
Q Consensus        13 ~tall~~~~L~~~ls~~qw~al~ll~~Gv~l~~~~~~~~~~~~~~~~~~~~G~~~~l~~a~~sa~a~vy~E~~~K~~~~~   92 (237)
                      .++++....++++++..||.++..+..|+..++.++..+  .....++...|..+.+.++++++++++|+||..|+++..
T Consensus        37 ~~~l~~~g~l~~~ls~~q~~al~~l~~~~~~~~~~~~~~--~~~~~g~~~~g~~~~l~a~~~~~~~~~y~e~~~k~~~~~  114 (222)
T TIGR00803        37 STALMTLGSLVASLGDDQWFSLKLLKLGVAIVQMVQSSA--KTLMFGNPVVGLSAVLSALLSSGFAGVYFEKILKDGDTM  114 (222)
T ss_pred             HHHHHHHHHHHhHhhHHHHHHHHHHHHhHeeeecCCCCc--cccccccHHHHHHHHHHHHHHHhhhHHHHHHcccCCCCc
Confidence            444444555555555555555555555554444332211  011224567888888899999999999999999988888


Q ss_pred             hHHHHHHHHHHHHHHHHHHHHhhccccccccCccccccccccchHHHHHHHHHHHhhhhhhhhhhhhhHHHHHHHHHHHH
Q 026565           93 LYWQNVQLYTFGAIFNMFRLLLDDFRGGFEKGPWWQRLFDGYNITTWMVVFNLGSTGLLVSWLMKYADNIIKVYSTSMAM  172 (237)
Q Consensus        93 ~~~~n~~L~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~il~~a~~Gl~va~vlk~~d~i~k~~a~s~si  172 (237)
                      +|.||+++++++.+.+.......+.....+.     ++++||+...|.++++++.+|++++.++||.|+++|++++++..
T Consensus       115 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~a~~~~~v~~vlk~~~~~~~~~~~~~~~  189 (222)
T TIGR00803       115 FWSRNLQLPLFGLFSTFSVLLWSDGTLISNF-----GFFIGYPTAVWIVGLLNVGGGLCIGGVVRYADNTTKSFVTALSI  189 (222)
T ss_pred             hHHHHHHHHHHHHHHHHHHHhhcccchhhcc-----CcccCCchHHHHHHHHHHhcCceeeehhHHhHHHHHHHHHHHHH
Confidence            9999999999998876655444444333332     47899999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHcCCCccHHHHHHHHHHHHHhHhc
Q 026565          173 LLTMVLSVYLFNFKPTLQLFLGIIICMMSLHMY  205 (237)
Q Consensus       173 v~s~lls~~~f~~~~t~~~~vG~~lV~~s~~lY  205 (237)
                      +++.++|+++||++++..+++|..+|+.|+++|
T Consensus       190 ~~s~lls~~~f~~~ls~~~~~g~~lV~~~~~lY  222 (222)
T TIGR00803       190 ILSTLASVRLFDAKISSTFYLGAILVFLATFLY  222 (222)
T ss_pred             HHHHHHHHHHhcCCccHHHHHHHHHHHeeeEeC
Confidence            999999999999999999999999999999988

NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids.

>KOG1583 consensus UDP-N-acetylglucosamine transporter [Carbohydrate transport and metabolism]

Probab=99.85  E-value=3.3e-21  Score=163.64  Aligned_cols=201  Identities=16%  Similarity=0.222  Sum_probs=142.3

Q ss_pred             CCChhHH---------HHHHHHHHHhcCCCCHHHHHHHHHHHHHHhhhcccCCCcccc-------Ccc-cc--cchhHHH
Q 026565            6 MITRPFH---------FSLKFSRLFLRRRLSTLQWMAIVLLAVGTTTSQVKGCGEALC-------DSL-FA--APIQGYL   66 (237)
Q Consensus         6 ~i~~p~~---------~tall~~~~L~~~ls~~qw~al~ll~~Gv~l~~~~~~~~~~~-------~~~-~~--~~~~G~~   66 (237)
                      ||++|+|         .+++++++++|||||.+|+.+++++++|++++.+.+..+...       ++. ..  .-..|+.
T Consensus        88 ~I~~PlHiIfRsgsll~nM~~g~il~~k~Ys~~Qy~Sv~~iTiGiiIcTl~s~~d~~~~~~~l~~~~~~~~~~~w~iGi~  167 (330)
T KOG1583|consen   88 NIPMPLHIIFRSGSLLANMILGWILLGKRYSLRQYSSVLMITIGIIICTLFSSKDGRSKLSGLDSGSAQSDFFWWLIGIA  167 (330)
T ss_pred             cccceEEEEEecCcHHHHHHHHHHhccceeehhhhhhHHhhhhhheeEEeecCcchhhhhcccccCcccccchHHHHHHH
Confidence            8999999         899999999999999999999999999999998765443211       111 11  2246888


Q ss_pred             HHHHHHHHHHHHHHHHHHHhhcCCchhHHHHHHHH-HHHHHHHHHHH--HhhccccccccCccccccccccchHHHHHHH
Q 026565           67 LGVLSACLSALAGVYTEFLMKKNNDSLYWQNVQLY-TFGAIFNMFRL--LLDDFRGGFEKGPWWQRLFDGYNITTWMVVF  143 (237)
Q Consensus        67 ~~l~~a~~sa~a~vy~E~~~K~~~~~~~~~n~~L~-~~~~~~~~~~~--~~~~~~~~~~~g~~~~~~~~g~~~~~~~~il  143 (237)
                      +...+.+.||..|+|+|..+|+++.+ |.+++++. +.++|+.++..  ...++....+.-+...+.+.+--|..|..++
T Consensus       168 lL~~al~~sa~mgiyqE~~Y~kyGKh-~~EalFytH~LsLP~Flf~~~div~~~~~~~~se~~~~p~~g~~vP~~~~yLl  246 (330)
T KOG1583|consen  168 LLVFALLLSAYMGIYQETTYQKYGKH-WKEALFYTHFLSLPLFLFMGDDIVSHWRLAFKSESYLIPLLGFKVPSMWVYLL  246 (330)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhcCC-hHHHHHHHHHhccchHHHhcchHHHHHHHHhcCcceeccccCccccHHHHHHH
Confidence            88889999999999999999999754 77788774 67777766642  2222222211100111122222445555555


Q ss_pred             HHHHh-hhhhhhhhhhhhHHHHHHHHHHHH--------HHHHHHHHHHcCCCccHHHHHHHHHHHHHhHhccCCCCCC
Q 026565          144 NLGST-GLLVSWLMKYADNIIKVYSTSMAM--------LLTMVLSVYLFNFKPTLQLFLGIIICMMSLHMYFAPPGML  212 (237)
Q Consensus       144 ~~a~~-Gl~va~vlk~~d~i~k~~a~s~si--------v~s~lls~~~f~~~~t~~~~vG~~lV~~s~~lY~~~~~~~  212 (237)
                      .+.+. ..|+..     .+++.+.++++++        .++.++|+.+|++|+|++.++|+.+|++|+.+|...-.+|
T Consensus       247 ~n~L~Qy~Cikg-----Vy~L~te~~sLTVTlvltlRKFvSLl~SiiyF~Npft~~h~lGa~lVF~Gt~~fa~~~~~~  319 (330)
T KOG1583|consen  247 FNVLTQYFCIKG-----VYILTTETSSLTVTLVLTLRKFVSLLFSIIYFENPFTPWHWLGAALVFFGTLLFANVWNHP  319 (330)
T ss_pred             HHHHHHHHHHHh-----hhhhhceecceEEEEeeeHHHHHHHhheeeEecCCCCHHHHHHHHHHHHHHHHHHHHHcCc
Confidence            55553 444444     3566666655442        4899999999999999999999999999999998765544

>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function

Probab=99.84  E-value=1.1e-19  Score=161.75  Aligned_cols=189  Identities=20%  Similarity=0.215  Sum_probs=149.8

Q ss_pred             HHHHHHHHHhcCCCCHHHHHHHHHHHHHHhhhcccCCCccccCcccccchhHHHHHHHHHHHHHHHHHHHHHHhhcCCch
Q 026565           13 FSLKFSRLFLRRRLSTLQWMAIVLLAVGTTTSQVKGCGEALCDSLFAAPIQGYLLGVLSACLSALAGVYTEFLMKKNNDS   92 (237)
Q Consensus        13 ~tall~~~~L~~~ls~~qw~al~ll~~Gv~l~~~~~~~~~~~~~~~~~~~~G~~~~l~~a~~sa~a~vy~E~~~K~~~~~   92 (237)
                      +++++++++||+|+++.||+++++.++|++++...|...++.+...++++.|.+++++++.++|+.+|+.|+..|+.+..
T Consensus       118 ~~~~LS~~fL~~ry~~~~~~gv~i~i~Gv~lv~~sD~~~~~~~~~~~~~i~GDll~l~~a~lya~~nV~~E~~v~~~~~~  197 (334)
T PF06027_consen  118 FVMILSFIFLKRRYSWFHILGVLICIAGVVLVVVSDVLSGSDSSSGSNPILGDLLALLGAILYAVSNVLEEKLVKKAPRV  197 (334)
T ss_pred             HHHHHHHHHHHhhhhHHHHHHHHHHHhhhhheeeecccccccCCCCCccchhHHHHHHHHHHHHHHHHHHHHhcccCCHH
Confidence            79999999999999999999999999999999887755433333456789999999999999999999999999987532


Q ss_pred             hHHHHHHHHHHHHHHHHHHHHhhccccccccCccccccccccchHHHHH----HHHHHHhhhhhhhhhhhhhHHHHHHHH
Q 026565           93 LYWQNVQLYTFGAIFNMFRLLLDDFRGGFEKGPWWQRLFDGYNITTWMV----VFNLGSTGLLVSWLMKYADNIIKVYST  168 (237)
Q Consensus        93 ~~~~n~~L~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~----il~~a~~Gl~va~vlk~~d~i~k~~a~  168 (237)
                        .-.-++.+++.+++.+....-|+.++.+ -+        |++..+..    .+.......++..++++.++..-+...
T Consensus       198 --~~lg~~Glfg~ii~~iq~~ile~~~i~~-~~--------w~~~~~~~~v~~~~~lf~~y~l~p~~l~~ssAt~~nLsL  266 (334)
T PF06027_consen  198 --EFLGMLGLFGFIISGIQLAILERSGIES-IH--------WTSQVIGLLVGYALCLFLFYSLVPIVLRMSSATFFNLSL  266 (334)
T ss_pred             --HHHHHHHHHHHHHHHHHHHheehhhhhc-cC--------CChhhHHHHHHHHHHHHHHHHHHHHHHHhCccceeehHH
Confidence              2245667788888887766555544321 11        22222221    122233456778889999999889999


Q ss_pred             HHHHHHHHHHHHHHcCCCccHHHHHHHHHHHHHhHhccCCCCCC
Q 026565          169 SMAMLLTMVLSVYLFNFKPTLQLFLGIIICMMSLHMYFAPPGML  212 (237)
Q Consensus       169 s~siv~s~lls~~~f~~~~t~~~~vG~~lV~~s~~lY~~~~~~~  212 (237)
                      .++.+++.++++++||+++++.+++|.++|++|..+|+..|++.
T Consensus       267 LTsd~~ali~~i~~f~~~~~~ly~~af~lIiiG~vvy~~~~~~~  310 (334)
T PF06027_consen  267 LTSDFYALIIDIFFFGYKFSWLYILAFALIIIGFVVYNLAESPE  310 (334)
T ss_pred             HHhhHHHHHHHHHhcCccccHHHHHHHHHHHHHhheEEccCCcc
Confidence            99999999999999999999999999999999999999987754

Some of the sequences in this family are annotated as putative membrane proteins.

>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []

Probab=99.80  E-value=3.8e-18  Score=150.63  Aligned_cols=204  Identities=21%  Similarity=0.322  Sum_probs=151.2

Q ss_pred             ccccCCChhHH---------HHHHHHHHHhcCCCCHHHHHHHHHHHHHHhhhcccCCCccccCccc-ccchhHHHHHHHH
Q 026565            2 EAISMITRPFH---------FSLKFSRLFLRRRLSTLQWMAIVLLAVGTTTSQVKGCGEALCDSLF-AAPIQGYLLGVLS   71 (237)
Q Consensus         2 ~~~~~i~~p~~---------~tall~~~~L~~~ls~~qw~al~ll~~Gv~l~~~~~~~~~~~~~~~-~~~~~G~~~~l~~   71 (237)
                      +|+.-++.|.|         ++++++++++|||++++||++++++++|+++....+..+++.++.. .....|+.+.+++
T Consensus        83 ~al~~i~~p~~~~~ks~~~i~vmi~~~l~~~k~y~~~~~~~v~li~~Gv~~~~~~~~~~~~~~~~~~~~~~~G~~ll~~s  162 (303)
T PF08449_consen   83 AALKYISYPTQIVFKSSKPIPVMILGVLILGKRYSRRQYLSVLLITIGVAIFTLSDSSSSSSSNSSSFSSALGIILLLLS  162 (303)
T ss_pred             HHHHhCChHHHHHHhhhHHHHHHHHHHHhcCccccHHHHHHHHHHHhhHheeeecccccccccccccccchhHHHHHHHH
Confidence            45667888888         9999999999999999999999999999999988775543322211 2223499999999


Q ss_pred             HHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHHHHh---hccccccccCccccccccccchHH---HHHHHHH
Q 026565           72 ACLSALAGVYTEFLMKKNNDSLYWQNVQLYTFGAIFNMFRLLL---DDFRGGFEKGPWWQRLFDGYNITT---WMVVFNL  145 (237)
Q Consensus        72 a~~sa~a~vy~E~~~K~~~~~~~~~n~~L~~~~~~~~~~~~~~---~~~~~~~~~g~~~~~~~~g~~~~~---~~~il~~  145 (237)
                      .++.|+.++|+||.+|+++.+.+..-....++++++.++....   .+..+.       ..+...++...   ....+.+
T Consensus       163 l~~~a~~~~~qe~~~~~~~~~~~~~mfy~n~~~~~~~~~~~~~l~~~~~~~~-------~~f~~~~p~~~~~l~~~s~~~  235 (303)
T PF08449_consen  163 LLLDAFTGVYQEKLFKKYGKSPWELMFYTNLFSLPFLLILLFLLPTGEFRSA-------IRFISAHPSVLLYLLLFSLTG  235 (303)
T ss_pred             HHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHhhHhhHH-------HHHHHHhHHHHHHHHHHHHHH
Confidence            9999999999999999988765433333357777777665443   122111       11222222221   2223344


Q ss_pred             HHhhhhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHcCCCccHHHHHHHHHHHHHhHhccCCCCCC
Q 026565          146 GSTGLLVSWLMKYADNIIKVYSTSMAMLLTMVLSVYLFNFKPTLQLFLGIIICMMSLHMYFAPPGML  212 (237)
Q Consensus       146 a~~Gl~va~vlk~~d~i~k~~a~s~siv~s~lls~~~f~~~~t~~~~vG~~lV~~s~~lY~~~~~~~  212 (237)
                      +++...+..++|+.++...+..+++--+++.++|+++||+++++..++|..+|+.|+.+|+...+|+
T Consensus       236 ~~g~~~i~~~~~~~~al~~t~v~t~Rk~~sillS~~~f~~~~~~~~~~G~~lv~~g~~~~~~~~~k~  302 (303)
T PF08449_consen  236 ALGQFFIFYLIKKFSALTTTIVTTLRKFLSILLSVIIFGHPLSPLQWIGIVLVFAGIFLYSYAKKKK  302 (303)
T ss_pred             HHHHHHHHHHHHhcCchhhhhHHHHHHHHHHHHHHHhcCCcCChHHHHHHHHhHHHHHHHHHhhccC
Confidence            4444555566788888888888888889999999999999999999999999999999999887765

; GO: 0055085 transmembrane transport

>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional

Probab=99.68  E-value=2.9e-15  Score=134.96  Aligned_cols=191  Identities=17%  Similarity=0.284  Sum_probs=132.8

Q ss_pred             CCChhHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhhhcccCCCccccCcccccchhHHHHHHHHHHHHHHHHHHHHHH
Q 026565            6 MITRPFHFSLKFSRLFLRRRLSTLQWMAIVLLAVGTTTSQVKGCGEALCDSLFAAPIQGYLLGVLSACLSALAGVYTEFL   85 (237)
Q Consensus         6 ~i~~p~~~tall~~~~L~~~ls~~qw~al~ll~~Gv~l~~~~~~~~~~~~~~~~~~~~G~~~~l~~a~~sa~a~vy~E~~   85 (237)
                      .-+.|+ ++++++++++|||+++++|.++++.++|+.++..++.         +....|+++++++++++++.+++.+|.
T Consensus       147 ka~~Pv-ft~lls~~~l~ek~s~~~~l~l~l~v~Gv~l~~~~~~---------~~~~~G~~~~l~s~~~~a~~~i~~k~~  216 (350)
T PTZ00343        147 KAAEPV-FTALLSILFLKQFLNLYAYLSLIPIVGGVALASVKEL---------HFTWLAFWCAMLSNLGSSLRSIFAKKT  216 (350)
T ss_pred             HHhhHH-HHHHHHHHHhCCCccHHHHHHHHHHHHHHHheecccc---------hhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            346677 9999999999999999999999999999999874332         224679999999999999999999999


Q ss_pred             hhcCCc---hhHHHHHHH--HHHHHHHHHHHHHhhccccccccCcccc--ccccccch-HHHHHHHHHHHhhhhhh----
Q 026565           86 MKKNND---SLYWQNVQL--YTFGAIFNMFRLLLDDFRGGFEKGPWWQ--RLFDGYNI-TTWMVVFNLGSTGLLVS----  153 (237)
Q Consensus        86 ~K~~~~---~~~~~n~~L--~~~~~~~~~~~~~~~~~~~~~~~g~~~~--~~~~g~~~-~~~~~il~~a~~Gl~va----  153 (237)
                      +++++.   +....|...  ...+.++.+......|......  .+..  ..+..+.. ..+..++...+.+.+..    
T Consensus       217 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~lp~~~~~e~~~~~~--~~~~~~~~~~~~~~~~~l~~i~~s~l~~~l~n~~~f  294 (350)
T PTZ00343        217 MKNKSEIGENLTASNIYMLLTLIASLISLPLVLFFEGKKWVP--VWTNYTANMTNYTKGIIIFKIFFSGVWYYLYNEVAF  294 (350)
T ss_pred             hcccccccccCCHHHHHHHHHHHHHHHHHHHHHHHhhHHHHH--HHHHhhhcccccchHHHHHHHHHHHHHHHHHHHHHH
Confidence            876531   222233333  2344444444333222211000  0000  01111211 12222333333343333    


Q ss_pred             hhhhhhhHHHHHHHHHHHHHHHHHHHHHHcCCCccHHHHHHHHHHHHHhHhccCC
Q 026565          154 WLMKYADNIIKVYSTSMAMLLTMVLSVYLFNFKPTLQLFLGIIICMMSLHMYFAP  208 (237)
Q Consensus       154 ~vlk~~d~i~k~~a~s~siv~s~lls~~~f~~~~t~~~~vG~~lV~~s~~lY~~~  208 (237)
                      ..+++.+.+..+.+..+..++++++|+++|||++|+..++|.++++.|+++|+.-
T Consensus       295 ~~l~~~s~~t~sv~~~lk~V~~iv~s~l~~ge~lt~~~~iG~~lii~Gv~lYs~~  349 (350)
T PTZ00343        295 YCLGKVNQVTHAVANTLKRVVIIVSSIIIFQTQVTLLGYLGMAVAILGALLYSLF  349 (350)
T ss_pred             HHHhccchhHHHHHHHHHHHHHhhhhHHHhCCCCchHhHHHHHHHHHHHHHHhhc
Confidence            3678889999999999999999999999999999999999999999999999863

>PLN00411 nodulin MtN21 family protein; Provisional

Probab=99.64  E-value=3.7e-14  Score=128.04  Aligned_cols=199  Identities=12%  Similarity=0.128  Sum_probs=133.8

Q ss_pred             ccccCCChhHHHHHHHHHHH------hcCCCCHHHHHHHHHHHHHHhhhcccCCCc--------------cc-cC-cccc
Q 026565            2 EAISMITRPFHFSLKFSRLF------LRRRLSTLQWMAIVLLAVGTTTSQVKGCGE--------------AL-CD-SLFA   59 (237)
Q Consensus         2 ~~~~~i~~p~~~tall~~~~------L~~~ls~~qw~al~ll~~Gv~l~~~~~~~~--------------~~-~~-~~~~   59 (237)
                      .++.+-+.|+ +++++++++      +|||++++||.++++.++|+.++...+...              .. .+ ....
T Consensus       107 asll~~~~P~-~~~lla~~~~~e~~~~~er~~~~~~~G~~l~~~Gv~ll~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~  185 (358)
T PLN00411        107 ASAISNITPA-LTFILAIIFRMEKVSFKERSSVAKVMGTILSLIGALVVIFYHGPRVFVASSPPYLNFRQLSPPLSSSNS  185 (358)
T ss_pred             HHHHHHhhHH-HHHHHHHHHHhchhhhcccccHHHHHHHHHHHHHHHHHHHccCcccccccccccccccccccccCCCcc
Confidence            3556778899 999999999      699999999999999999998865432110              00 00 0112


Q ss_pred             cchhHHHHHHHHHHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHHHHhhccccccccCccccccccccchHHH
Q 026565           60 APIQGYLLGVLSACLSALAGVYTEFLMKKNNDSLYWQNVQLYTFGAIFNMFRLLLDDFRGGFEKGPWWQRLFDGYNITTW  139 (237)
Q Consensus        60 ~~~~G~~~~l~~a~~sa~a~vy~E~~~K~~~~~~~~~n~~L~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~  139 (237)
                      +...|..+++.+++++++..++.+|..++++.......++..+.++++..+....++.+ .  +     .....++...+
T Consensus       186 ~~~lG~~l~l~aa~~wa~~~il~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~l~~~~~~-~--~-----~~~~~~~~~~~  257 (358)
T PLN00411        186 DWLIGGALLTIQGIFVSVSFILQAHIMSEYPAAFTVSFLYTVCVSIVTSMIGLVVEKNN-P--S-----VWIIHFDITLI  257 (358)
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHhHHHHHHHHHHHHHHHHHHHHHccCC-c--c-----cceeccchHHH
Confidence            23569999999999999999999999888754322222233333344333333322111 0  0     01122222222


Q ss_pred             HHH---HHHHHhhhhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHcCCCccHHHHHHHHHHHHHhHhccCCC
Q 026565          140 MVV---FNLGSTGLLVSWLMKYADNIIKVYSTSMAMLLTMVLSVYLFNFKPTLQLFLGIIICMMSLHMYFAPP  209 (237)
Q Consensus       140 ~~i---l~~a~~Gl~va~vlk~~d~i~k~~a~s~siv~s~lls~~~f~~~~t~~~~vG~~lV~~s~~lY~~~~  209 (237)
                      .++   +..++...+-...+|+.+....+....+.++++++++++++||++++..++|.++|+.|+++-+..+
T Consensus       258 ~i~y~~i~t~lay~lw~~~v~~~ga~~as~~~~L~PV~a~llg~l~LgE~lt~~~~iG~~LIl~Gv~l~~~~~  330 (358)
T PLN00411        258 TIVTMAIITSVYYVIHSWTVRHKGPLYLAIFKPLSILIAVVMGAIFLNDSLYLGCLIGGILITLGFYAVMWGK  330 (358)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhccCchHHHHHHhHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHhhh
Confidence            211   1222233344456788899999999999999999999999999999999999999999999987643

>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator

Probab=99.61  E-value=1.6e-14  Score=127.15  Aligned_cols=195  Identities=14%  Similarity=0.205  Sum_probs=126.2

Q ss_pred             ccCCChhHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhhhcccCCCccccCcccccchhHHHHHHHHHHHHHHHHHHHH
Q 026565            4 ISMITRPFHFSLKFSRLFLRRRLSTLQWMAIVLLAVGTTTSQVKGCGEALCDSLFAAPIQGYLLGVLSACLSALAGVYTE   83 (237)
Q Consensus         4 ~~~i~~p~~~tall~~~~L~~~ls~~qw~al~ll~~Gv~l~~~~~~~~~~~~~~~~~~~~G~~~~l~~a~~sa~a~vy~E   83 (237)
                      +.+-+.|+ ++++++++++|||+++++|.++++.++|+.+....+.         +....|.++++++++++++..++.+
T Consensus        96 li~~~~Pv-~~~ll~~~~~~e~~~~~~~~~l~l~~~Gv~l~~~~~~---------~~~~~G~~~~l~a~~~~a~~~v~~k  165 (302)
T TIGR00817        96 TIKAMEPF-FSVVLSAFFLGQEFPSTLWLSLLPIVGGVALASDTEL---------SFNWAGFLSAMISNITFVSRNIFSK  165 (302)
T ss_pred             HHHhcchH-HHHHHHHHHhCCCCcHHHHHHHHHHHHHHhhhcCCcc---------cccHHHHHHHHHHHHHHHHHHHHHH
Confidence            34456787 9999999999999999999999999999987642211         2345799999999999999999999


Q ss_pred             HHhhcCCchhHHHHHHHHHHHHHHHHHHHHhhccccccccCccccccccccch-HHHHHHHHHHH-hh----hhhhhhhh
Q 026565           84 FLMKKNNDSLYWQNVQLYTFGAIFNMFRLLLDDFRGGFEKGPWWQRLFDGYNI-TTWMVVFNLGS-TG----LLVSWLMK  157 (237)
Q Consensus        84 ~~~K~~~~~~~~~n~~L~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~-~~~~~il~~a~-~G----l~va~vlk  157 (237)
                      |..++++.+.+..+......+.++.++.....+........ + .......+. ..+..++..++ ..    ...-..+|
T Consensus       166 ~~~~~~~~~~~~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  243 (302)
T TIGR00817       166 KAMTIKSLDKTNLYAYISIMSLFLLSPPAFITEGPPFLPHG-F-MQAISGVNVTKIYTVSLVAAMGFFHFYQQVAFMLLG  243 (302)
T ss_pred             HhhccCCCCcccHHHHHHHHHHHHHHHHHHHHcchHHHHHH-H-HHhhcccCchHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence            98873221211111111223333333322222211100000 0 000000111 11221211111 11    11123678


Q ss_pred             hhhHHHHHHHHHHHHHHHHHHHHHHcCCCccHHHHHHHHHHHHHhHhccCCCC
Q 026565          158 YADNIIKVYSTSMAMLLTMVLSVYLFNFKPTLQLFLGIIICMMSLHMYFAPPG  210 (237)
Q Consensus       158 ~~d~i~k~~a~s~siv~s~lls~~~f~~~~t~~~~vG~~lV~~s~~lY~~~~~  210 (237)
                      +.++...+....+.+++++++++++|||++|+..++|.++++.|+++|+..+.
T Consensus       244 ~~sa~t~sv~~~l~pv~~~~~~~~~lge~lt~~~~~G~~lil~Gv~l~~~~k~  296 (302)
T TIGR00817       244 RVSPLTHSVGNCMKRVVVIVVSILFFGTKISPQQVFGTGIAIAGVFLYSRVKA  296 (302)
T ss_pred             cCCchHHHHHhhhhhhheeeeehhhcCCCCchhHHHHHHHHHHHHHHHHHHhc
Confidence            88999999999999999999999999999999999999999999999997543

specificities overlap.

>PRK11453 O-acetylserine/cysteine export protein; Provisional

Probab=99.58  E-value=3.8e-13  Score=118.45  Aligned_cols=189  Identities=14%  Similarity=0.133  Sum_probs=123.7

Q ss_pred             CCChhHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhhhcccCCCccccCcccccchhHHHHHHHHHHHHHHHHHHHHHH
Q 026565            6 MITRPFHFSLKFSRLFLRRRLSTLQWMAIVLLAVGTTTSQVKGCGEALCDSLFAAPIQGYLLGVLSACLSALAGVYTEFL   85 (237)
Q Consensus         6 ~i~~p~~~tall~~~~L~~~ls~~qw~al~ll~~Gv~l~~~~~~~~~~~~~~~~~~~~G~~~~l~~a~~sa~a~vy~E~~   85 (237)
                      +-+.|+ ++.+++++++|||++++||.++++.++|+.+...++.+.      .+.+..|.++++++++++++..++.+|.
T Consensus        93 ~~~~pi-~~~ll~~~~l~e~~~~~~~~~~~l~~~Gv~ll~~~~~~~------~~~~~~G~~l~l~aal~~a~~~v~~~~~  165 (299)
T PRK11453         93 LQAQAF-FTIVLGAFTFGERLQGKQLAGIALAIFGVLVLIEDSLNG------QHVAMLGFMLTLAAAFSWACGNIFNKKI  165 (299)
T ss_pred             HHhHHH-HHHHHHHHHhcCcCcHHHHHHHHHHHHhHHHhccccCCC------cchhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            345676 899999999999999999999999999998877432211      1223579999999999999999999997


Q ss_pred             hhcCCchhHHHHHHH--HHHHHHHHHHHHHhhccccccccCccccccccccchHHHHHHHHHHH-----hhhhhhhhhhh
Q 026565           86 MKKNNDSLYWQNVQL--YTFGAIFNMFRLLLDDFRGGFEKGPWWQRLFDGYNITTWMVVFNLGS-----TGLLVSWLMKY  158 (237)
Q Consensus        86 ~K~~~~~~~~~n~~L--~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~il~~a~-----~Gl~va~vlk~  158 (237)
                      .|+.+.. .......  ...+.+.........+......      ..+..+++..|..++..++     +..+....+|+
T Consensus       166 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~l~~l~i~~t~~~~~l~~~~l~~  238 (299)
T PRK11453        166 MSHSTRP-AVMSLVVWSALIPIIPFFVASLILDGSATMI------HSLVTIDMTTILSLMYLAFVATIVGYGIWGTLLGR  238 (299)
T ss_pred             hcccCcc-chhHHHHHHHHHHHHHHHHHHHHhcCchhhh------hhhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            6654321 1111111  1222111111111111110000      0111233333333333333     33333344577


Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHcCCCccHHHHHHHHHHHHHhHhccCC
Q 026565          159 ADNIIKVYSTSMAMLLTMVLSVYLFNFKPTLQLFLGIIICMMSLHMYFAP  208 (237)
Q Consensus       159 ~d~i~k~~a~s~siv~s~lls~~~f~~~~t~~~~vG~~lV~~s~~lY~~~  208 (237)
                      .++...+....+.++++.+++++++||++++..++|..+++.|+++-..+
T Consensus       239 ~~a~~~s~~~~l~Pv~a~~~~~l~lgE~~~~~~~iG~~lI~~gv~l~~~~  288 (299)
T PRK11453        239 YETWRVAPLSLLVPVVGLASAALLLDERLTGLQFLGAVLIMAGLYINVFG  288 (299)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHHHhcc
Confidence            77777788888999999999999999999999999999999999876543

>PRK11689 aromatic amino acid exporter; Provisional

Probab=99.57  E-value=1.7e-13  Score=120.55  Aligned_cols=187  Identities=12%  Similarity=0.126  Sum_probs=126.1

Q ss_pred             ccCCChhHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhhhcccCCCccccC--cccccchhHHHHHHHHHHHHHHHHHH
Q 026565            4 ISMITRPFHFSLKFSRLFLRRRLSTLQWMAIVLLAVGTTTSQVKGCGEALCD--SLFAAPIQGYLLGVLSACLSALAGVY   81 (237)
Q Consensus         4 ~~~i~~p~~~tall~~~~L~~~ls~~qw~al~ll~~Gv~l~~~~~~~~~~~~--~~~~~~~~G~~~~l~~a~~sa~a~vy   81 (237)
                      +.+-+.|+ ++++++++++|||++++||.++++.++|+.++..++.+.+..+  ....+...|..+++.+++++|+..++
T Consensus        96 ~l~~~~Pi-~~~ll~~~~~~e~~~~~~~~g~~l~~~Gv~li~~~~~~~~~~~~~~~~~~~~~G~~~~l~aa~~~A~~~v~  174 (295)
T PRK11689         96 MVNYLWPS-LTILFAVLFNGQKANWLLIPGLLLALAGVAWVLGGDNGLSLAELINNIASNPLSYGLAFIGAFIWAAYCNV  174 (295)
T ss_pred             HHHHHhHH-HHHHHHHHHhcCCccHHHHHHHHHHHHhHhheecCCccchhhhhhhccccChHHHHHHHHHHHHHHHHHHH
Confidence            34456788 9999999999999999999999999999988875432111000  01112356999999999999999999


Q ss_pred             HHHHhhcCCchhHHHHHHHHHHHHHHHHHHHHhhccccccccCccccccccccchHHHHHHHH----HHHhhhhhhhhhh
Q 026565           82 TEFLMKKNNDSLYWQNVQLYTFGAIFNMFRLLLDDFRGGFEKGPWWQRLFDGYNITTWMVVFN----LGSTGLLVSWLMK  157 (237)
Q Consensus        82 ~E~~~K~~~~~~~~~n~~L~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~il~----~a~~Gl~va~vlk  157 (237)
                      .+|..++.+. .   .......+..+ .+.....+.. .           ..+++..|..++.    ..++..+-...+|
T Consensus       175 ~k~~~~~~~~-~---~~~~~~~~~~l-~~~~~~~~~~-~-----------~~~~~~~~~~l~~~~~~t~~~~~l~~~al~  237 (295)
T PRK11689        175 TRKYARGKNG-I---TLFFILTALAL-WIKYFLSPQP-A-----------MVFSLPAIIKLLLAAAAMGFGYAAWNVGIL  237 (295)
T ss_pred             HhhccCCCCc-h---hHHHHHHHHHH-HHHHHHhcCc-c-----------ccCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            9998655532 1   11111122221 2211222110 0           0112222222222    2223344456678


Q ss_pred             hhhHHHHHHHHHHHHHHHHHHHHHHcCCCccHHHHHHHHHHHHHhHhccCC
Q 026565          158 YADNIIKVYSTSMAMLLTMVLSVYLFNFKPTLQLFLGIIICMMSLHMYFAP  208 (237)
Q Consensus       158 ~~d~i~k~~a~s~siv~s~lls~~~f~~~~t~~~~vG~~lV~~s~~lY~~~  208 (237)
                      +.+...-+....+.++++++++++++||++++..++|.++|+.|+++-...
T Consensus       238 ~~~a~~~s~~~~l~Pv~a~i~~~~~lgE~~~~~~~iG~~lI~~gv~~~~~~  288 (295)
T PRK11689        238 HGNMTLLATASYFTPVLSAALAALLLSTPLSFSFWQGVAMVTAGSLLCWLA  288 (295)
T ss_pred             ccCHHHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHhHHHHhhh
Confidence            889998999999999999999999999999999999999999999877543

>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter

Probab=99.55  E-value=7.1e-13  Score=113.64  Aligned_cols=177  Identities=17%  Similarity=0.137  Sum_probs=124.5

Q ss_pred             CChhHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhhhcccCCCccccCcccccchhHHHHHHHHHHHHHHHHHHHHHHh
Q 026565            7 ITRPFHFSLKFSRLFLRRRLSTLQWMAIVLLAVGTTTSQVKGCGEALCDSLFAAPIQGYLLGVLSACLSALAGVYTEFLM   86 (237)
Q Consensus         7 i~~p~~~tall~~~~L~~~ls~~qw~al~ll~~Gv~l~~~~~~~~~~~~~~~~~~~~G~~~~l~~a~~sa~a~vy~E~~~   86 (237)
                      -+.|+ ++++++.+++|||++++||.++++.++|+.+...++.        .+....|+.+++.++++.+..+++.+|..
T Consensus        81 ~~~P~-~~~~~~~l~~~e~~~~~~~~gi~i~~~Gv~li~~~~~--------~~~~~~G~~~~l~a~~~~a~~~~~~k~~~  151 (260)
T TIGR00950        81 YLAPL-YVTLLSDLMGKERPRKLVLLAAVLGLAGAVLLLSDGN--------LSINPAGLLLGLGSGISFALGTVLYKRLV  151 (260)
T ss_pred             hhhHH-HHHHHHHHHccCCCcHHHHHHHHHHHHhHHhhccCCc--------ccccHHHHHHHHHHHHHHHHHHHHHhHHh
Confidence            35677 9999999999999999999999999999998764331        12346799999999999999999999888


Q ss_pred             hcCCchhHHHHHHHHHHHHHHHHHHHHhhccccccccCccccccccccch--HHHHHHHHHHHhhhhhhhhhhhhhHHHH
Q 026565           87 KKNNDSLYWQNVQLYTFGAIFNMFRLLLDDFRGGFEKGPWWQRLFDGYNI--TTWMVVFNLGSTGLLVSWLMKYADNIIK  164 (237)
Q Consensus        87 K~~~~~~~~~n~~L~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~--~~~~~il~~a~~Gl~va~vlk~~d~i~k  164 (237)
                      ++.+.+....+...+..+.++........+...          ..+....  ..+.-++...++..+....+|+.+...-
T Consensus       152 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~  221 (260)
T TIGR00950       152 KKEGPELLQFTGWVLLLGALLLLPFAWFLGPNP----------QALSLQWGALLYLGLIGTALAYFLWNKGLTLVDPSAA  221 (260)
T ss_pred             hcCCchHHHHHHHHHHHHHHHHHHHHHhcCCCC----------CcchHHHHHHHHHHHHHHHHHHHHHHHHHhcCCchHH
Confidence            766533222222223334333333222221110          0111111  1222223334455555666788888888


Q ss_pred             HHHHHHHHHHHHHHHHHHcCCCccHHHHHHHHHHHHHh
Q 026565          165 VYSTSMAMLLTMVLSVYLFNFKPTLQLFLGIIICMMSL  202 (237)
Q Consensus       165 ~~a~s~siv~s~lls~~~f~~~~t~~~~vG~~lV~~s~  202 (237)
                      +....+.++++.+++++++||+++...++|..+++.|+
T Consensus       222 s~~~~~~pv~~~ll~~~~~~E~~~~~~~~G~~li~~g~  259 (260)
T TIGR00950       222 SILALAEPLVALLLGLLILGETLSLPQLIGGALIIAAV  259 (260)
T ss_pred             HHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHhc
Confidence            99999999999999999999999999999999999885

>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional

Probab=99.54  E-value=5.9e-13  Score=116.86  Aligned_cols=187  Identities=16%  Similarity=0.194  Sum_probs=124.9

Q ss_pred             CCChhHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhhhcccCCCccccCcccccchhHHHHHHHHHHHHHHHHHHHHHH
Q 026565            6 MITRPFHFSLKFSRLFLRRRLSTLQWMAIVLLAVGTTTSQVKGCGEALCDSLFAAPIQGYLLGVLSACLSALAGVYTEFL   85 (237)
Q Consensus         6 ~i~~p~~~tall~~~~L~~~ls~~qw~al~ll~~Gv~l~~~~~~~~~~~~~~~~~~~~G~~~~l~~a~~sa~a~vy~E~~   85 (237)
                      .-+.|+ ++++++++ +|||++++||.++++.++|+.+...++..        +....|.++++++++++|+.+++.+|.
T Consensus       103 ~~~~Pl-~~~lla~~-~~e~~~~~~~~~~~la~~Gv~ll~~~~~~--------~~~~~G~l~~l~a~~~~a~~~~~~~~~  172 (292)
T PRK11272        103 VATVPL-FTLCFSRL-FGIRTRKLEWLGIAIGLAGIVLLNSGGNL--------SGNPWGAILILIASASWAFGSVWSSRL  172 (292)
T ss_pred             HHHHHH-HHHHHHHH-hcccCchhHHHHHHHHHHhHHHHhcCccc--------ccchHHHHHHHHHHHHHHHHHHHHHhc
Confidence            345777 89999985 69999999999999999999887643211        223579999999999999999999886


Q ss_pred             hhcCCchhHHHHHHHHHHHHHHHHHHHHhhccccccccCccccccccccchHHHHHHHHHHHhhhhhhhhhhhhhHHHHH
Q 026565           86 MKKNNDSLYWQNVQLYTFGAIFNMFRLLLDDFRGGFEKGPWWQRLFDGYNITTWMVVFNLGSTGLLVSWLMKYADNIIKV  165 (237)
Q Consensus        86 ~K~~~~~~~~~n~~L~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~il~~a~~Gl~va~vlk~~d~i~k~  165 (237)
                      .+++  +......++...+.+.........+.....       .-...|....+..++...++..+....+|+.+...-+
T Consensus       173 ~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~i~~l~i~~s~~~~~l~~~~~~~~~~~~~s  243 (292)
T PRK11272        173 PLPV--GMMAGAAEMLAAGVVLLIASLLSGERLTAL-------PTLSGFLALGYLAVFGSIIAISAYMYLLRNVRPALAT  243 (292)
T ss_pred             CCCc--chHHHHHHHHHHHHHHHHHHHHcCCccccc-------CCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCHHHHH
Confidence            5432  223223333333333222221111110000       0011121122222233333444455556888888888


Q ss_pred             HHHHHHHHHHHHHHHHHcCCCccHHHHHHHHHHHHHhHhccCCCCC
Q 026565          166 YSTSMAMLLTMVLSVYLFNFKPTLQLFLGIIICMMSLHMYFAPPGM  211 (237)
Q Consensus       166 ~a~s~siv~s~lls~~~f~~~~t~~~~vG~~lV~~s~~lY~~~~~~  211 (237)
                      ....+.++++.+++++++||++|...++|.++++.|+++.+..+++
T Consensus       244 ~~~~l~Pi~a~i~~~~~l~E~~t~~~iiG~~lIi~gv~~~~~~~~~  289 (292)
T PRK11272        244 SYAYVNPVVAVLLGTGLGGETLSPIEWLALGVIVFAVVLVTLGKYL  289 (292)
T ss_pred             HHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHHHhh
Confidence            8888999999999999999999999999999999999988765543

>PRK15430 putative chloramphenical resistance permease RarD; Provisional

Probab=99.42  E-value=2.3e-11  Score=107.08  Aligned_cols=179  Identities=13%  Similarity=0.180  Sum_probs=117.5

Q ss_pred             cCCChhHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhhhcccCCCccccCcccccchhHHHHHHHHHHHHHHHHHHHHH
Q 026565            5 SMITRPFHFSLKFSRLFLRRRLSTLQWMAIVLLAVGTTTSQVKGCGEALCDSLFAAPIQGYLLGVLSACLSALAGVYTEF   84 (237)
Q Consensus         5 ~~i~~p~~~tall~~~~L~~~ls~~qw~al~ll~~Gv~l~~~~~~~~~~~~~~~~~~~~G~~~~l~~a~~sa~a~vy~E~   84 (237)
                      .+-+.|+ ++++++++++|||++++||.++++.++|+.++..++.         +..    ...+++++++|+..++.+|
T Consensus       105 l~~~~Pi-~v~l~~~~~l~E~~~~~~~~g~~l~~~Gv~li~~~~~---------~~~----~~~l~aa~~~a~~~i~~r~  170 (296)
T PRK15430        105 GYFINPL-VNIVLGMIFLGERFRRMQWLAVILAICGVLVQLWTFG---------SLP----IIALGLAFSFAFYGLVRKK  170 (296)
T ss_pred             HHHHHHH-HHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHcC---------Ccc----HHHHHHHHHHHHHHHHHHh
Confidence            3446788 9999999999999999999999999999988753211         111    3567788999999999888


Q ss_pred             HhhcCCchhHHHHHHHHHHHHHHHHHHHHhhccccccccCccccccccccchHHH--HHHHHHHHhhhhhhhhhhhhhHH
Q 026565           85 LMKKNNDSLYWQNVQLYTFGAIFNMFRLLLDDFRGGFEKGPWWQRLFDGYNITTW--MVVFNLGSTGLLVSWLMKYADNI  162 (237)
Q Consensus        85 ~~K~~~~~~~~~n~~L~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~--~~il~~a~~Gl~va~vlk~~d~i  162 (237)
                      ..+++..+....+.....++.+...   ...+... ..      .....+..+.+  ......++...+....+|+.++.
T Consensus       171 ~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~-~~------~~~~~~~~~~~~~~~g~~t~i~~~~~~~a~~~~~a~  240 (296)
T PRK15430        171 IAVEAQTGMLIETMWLLPVAAIYLF---AIADSST-SH------MGQNPMSLNLLLIAAGIVTTVPLLCFTAAATRLRLS  240 (296)
T ss_pred             cCCCCchhHHHHHHHHHHHHHHHHH---HHccCCc-cc------ccCCcHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHH
Confidence            6432222222223333223222211   1111100 00      00011111111  11223344556667778999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHcCCCccHHHHHHHHHHHHHhHhccC
Q 026565          163 IKVYSTSMAMLLTMVLSVYLFNFKPTLQLFLGIIICMMSLHMYFA  207 (237)
Q Consensus       163 ~k~~a~s~siv~s~lls~~~f~~~~t~~~~vG~~lV~~s~~lY~~  207 (237)
                      .-+....+.++++.+++++++||++++..++|.++|+.++.+...
T Consensus       241 ~~s~~~~l~Pv~a~~~g~l~l~E~~~~~~~~G~~lI~~~~~v~~~  285 (296)
T PRK15430        241 TLGFFQYIGPTLMFLLAVTFYGEKPGADKMVTFAFIWVALAIFVM  285 (296)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHH
Confidence            999999999999999999999999999999999999877665543

>KOG1580 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=99.36  E-value=4.3e-12  Score=106.35  Aligned_cols=189  Identities=14%  Similarity=0.146  Sum_probs=123.3

Q ss_pred             HHHHHHHHHhcCCCCHHHHHHHHHHHHHHhhhcccCCCccccCcccccchhHHHHHHHHHHHHHHHHHHHHHHhhcCCch
Q 026565           13 FSLKFSRLFLRRRLSTLQWMAIVLLAVGTTTSQVKGCGEALCDSLFAAPIQGYLLGVLSACLSALAGVYTEFLMKKNNDS   92 (237)
Q Consensus        13 ~tall~~~~L~~~ls~~qw~al~ll~~Gv~l~~~~~~~~~~~~~~~~~~~~G~~~~l~~a~~sa~a~vy~E~~~K~~~~~   92 (237)
                      =+++++.++.||+++|+++++++++++||++.-+++.+....  .......|-++.+++-..-|+.|..+||+-+.+.++
T Consensus       124 PVMilGVl~~~KsY~w~kY~cVL~IV~GValFmYK~~Kv~g~--e~~t~g~GElLL~lSL~mDGlTg~~Qdrira~yq~~  201 (337)
T KOG1580|consen  124 PVMILGVLFAHKSYHWRKYCCVLMIVVGVALFMYKENKVGGA--EDKTFGFGELLLILSLAMDGLTGSIQDRIRASYQRT  201 (337)
T ss_pred             ceeeeehhhhcccccHHHHHHHHHHHHHHHHhhccccccCCC--cccccchHHHHHHHHHHhcccchhHHHHHHHhhccC
Confidence            348999999999999999999999999999998876543211  223456788888888888999999999987765432


Q ss_pred             --hHHHHHHHHHHHHHHHHHHHHhh-ccccccccCccccccccccchHHH---HHHHHHHHhhhhhhhhhhhhhHHHHHH
Q 026565           93 --LYWQNVQLYTFGAIFNMFRLLLD-DFRGGFEKGPWWQRLFDGYNITTW---MVVFNLGSTGLLVSWLMKYADNIIKVY  166 (237)
Q Consensus        93 --~~~~n~~L~~~~~~~~~~~~~~~-~~~~~~~~g~~~~~~~~g~~~~~~---~~il~~a~~Gl~va~vlk~~d~i~k~~  166 (237)
                        -.+.++++  ++.+....+.+.. |..+..       .|-+.++...|   ++-+..++|+.++=..+-+.+....+.
T Consensus       202 g~~MM~~~Nl--wStL~Lg~g~lfTGElweF~-------yF~~RhP~~~~~l~l~ai~s~LGQ~fIF~tv~~FgPLtCSi  272 (337)
T KOG1580|consen  202 GTSMMFYTNL--WSTLYLGAGLLFTGELWEFF-------YFVQRHPYVFWDLTLLAIASCLGQWFIFKTVEEFGPLTCSI  272 (337)
T ss_pred             chhhHHHHHH--HHHHHhhhhheehhhHHHHH-------HHHHhccHHHHHHHHHHHHHHhhhHHHHHHHHHhCCeeEEE
Confidence              12233333  4554444433322 111100       11122222222   122233344444444444455555555


Q ss_pred             HHHHHHHHHHHHHHHHcCCCccHHHHHHHHHHHHHhHhccCCCCCC
Q 026565          167 STSMAMLLTMVLSVYLFNFKPTLQLFLGIIICMMSLHMYFAPPGML  212 (237)
Q Consensus       167 a~s~siv~s~lls~~~f~~~~t~~~~vG~~lV~~s~~lY~~~~~~~  212 (237)
                      .++.--.+++++|+++|++|++...++|..+|+.+...=...-++.
T Consensus       273 vTTTRKfFTil~SVllf~npls~rQwlgtvlVF~aL~~D~~~GK~a  318 (337)
T KOG1580|consen  273 VTTTRKFFTILISVLLFNNPLSGRQWLGTVLVFSALTADVVDGKKA  318 (337)
T ss_pred             EeehHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHHhhhHhhcCCcC
Confidence            5555567999999999999999999999999999987665555543

>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein

Probab=99.33  E-value=2.9e-11  Score=105.58  Aligned_cols=181  Identities=17%  Similarity=0.222  Sum_probs=109.8

Q ss_pred             CChhHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhhhcccCCCccccCcccccchhHHHHHHHHHHHHHHHHHHHHHHh
Q 026565            7 ITRPFHFSLKFSRLFLRRRLSTLQWMAIVLLAVGTTTSQVKGCGEALCDSLFAAPIQGYLLGVLSACLSALAGVYTEFLM   86 (237)
Q Consensus         7 i~~p~~~tall~~~~L~~~ls~~qw~al~ll~~Gv~l~~~~~~~~~~~~~~~~~~~~G~~~~l~~a~~sa~a~vy~E~~~   86 (237)
                      -+.|+ ++++++++++|||++++||.++++.++|+.+...++..        .....|..+.+++++++++..++.+|..
T Consensus        97 ~~~p~-~~~l~~~~~~~e~~~~~~~~g~~~~~~Gv~ll~~~~~~--------~~~~~g~~~~l~aal~~a~~~i~~k~~~  167 (281)
T TIGR03340        97 RSSPL-LVAIWATLTLGETLSPLAWLGILIITLGLLVLGLSRFA--------QHRRKAYAWALAAALGTAIYSLSDKAAA  167 (281)
T ss_pred             hhhHH-HHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhccccc--------ccchhHHHHHHHHHHHHHHhhhhccccc
Confidence            34677 99999999999999999999999999999887644321        1123577788889999888888766653


Q ss_pred             hcCCch--h-HHHHHHHHHHHHHHHHHHHHhhccccccccCccccccccccchHHHHHHHHHHHhhhhhhhhhhhhhHHH
Q 026565           87 KKNNDS--L-YWQNVQLYTFGAIFNMFRLLLDDFRGGFEKGPWWQRLFDGYNITTWMVVFNLGSTGLLVSWLMKYADNII  163 (237)
Q Consensus        87 K~~~~~--~-~~~n~~L~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~il~~a~~Gl~va~vlk~~d~i~  163 (237)
                      ++.+..  . +....++...+.++.... ...+......       ....+-...+...+...++..+....+|+.+...
T Consensus       168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~-------~~~~~~~~~~~~~~~s~l~~~l~~~al~~~~a~~  239 (281)
T TIGR03340       168 LGVPAFYSALGYLGIGFLAMGWPFLLLY-LKRHGRSMFP-------YARQILPSATLGGLMIGGAYALVLWAMTRLPVAT  239 (281)
T ss_pred             cchhcccccHHHHHHHHHHHHHHHHHHH-HHHhccchhh-------hHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCceE
Confidence            332211  1 111111111112222211 1111110000       0000101112222222233333334456666555


Q ss_pred             HHHHHHHHHHHHHHHHHHHcCCCccHHHHHHHHHHHHHhHh
Q 026565          164 KVYSTSMAMLLTMVLSVYLFNFKPTLQLFLGIIICMMSLHM  204 (237)
Q Consensus       164 k~~a~s~siv~s~lls~~~f~~~~t~~~~vG~~lV~~s~~l  204 (237)
                      -+....++++++.+++++++||+++...++|.++++.|+++
T Consensus       240 ~~~~~~l~pv~a~l~g~~~lgE~~~~~~~iG~~lil~Gv~l  280 (281)
T TIGR03340       240 VVALRNTSIVFAVVLGIWFLNERWYLTRLMGVCIIVAGLVV  280 (281)
T ss_pred             EEeecccHHHHHHHHHHHHhCCCccHHHHHHHHHHHHhHHh
Confidence            55566778999999999999999999999999999999875

This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.

>KOG1581 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=99.30  E-value=5.8e-11  Score=102.77  Aligned_cols=193  Identities=13%  Similarity=0.126  Sum_probs=142.1

Q ss_pred             HHHHHHHHHhcCCCCHHHHHHHHHHHHHHhhhcccCCCccccCcccccchhHHHHHHHHHHHHHHHHHHHHHHhhcCCch
Q 026565           13 FSLKFSRLFLRRRLSTLQWMAIVLLAVGTTTSQVKGCGEALCDSLFAAPIQGYLLGVLSACLSALAGVYTEFLMKKNNDS   92 (237)
Q Consensus        13 ~tall~~~~L~~~ls~~qw~al~ll~~Gv~l~~~~~~~~~~~~~~~~~~~~G~~~~l~~a~~sa~a~vy~E~~~K~~~~~   92 (237)
                      =+++++.++-|+|++++++++.+++..|+.+..+.+.+++..+.+..+..+|+.++...-++-|+.+..+++++|+++.+
T Consensus       122 PVmlmg~Lvy~~ky~~~eYl~~~LIs~GvsiF~l~~~s~s~~~~g~~ns~~G~~Ll~~~L~fDgfTn~tQd~lf~~~k~s  201 (327)
T KOG1581|consen  122 PVMLMGTLVYGRKYSSFEYLVAFLISLGVSIFSLFPNSDSSSKSGRENSPIGILLLFGYLLFDGFTNATQDSLFKKYKVS  201 (327)
T ss_pred             HHHHHHHHHhcCccCcHHHHHHHHHHhheeeEEEecCCCCccccCCCCchHhHHHHHHHHHHHhhHHhHHHHHhccCCcc
Confidence            67899999999999999999999999999998876555443444556788999999888889999999999999988876


Q ss_pred             hHHHHHHHHHHHHHHHHHHHHhhccccccccCccccccccccchH---HHHHHHHHHHhhhhhhhhhhhhhHHHHHHHHH
Q 026565           93 LYWQNVQLYTFGAIFNMFRLLLDDFRGGFEKGPWWQRLFDGYNIT---TWMVVFNLGSTGLLVSWLMKYADNIIKVYSTS  169 (237)
Q Consensus        93 ~~~~n~~L~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~---~~~~il~~a~~Gl~va~vlk~~d~i~k~~a~s  169 (237)
                      -|-...-+-+++.+.+.......+.. . +    +..|-.-+...   ..+.-..+++|++.+...+..-++++-+..++
T Consensus       202 ~~~mM~~vNLf~~i~~~~~li~qg~~-~-~----av~F~~~hp~~~~Di~l~s~~gavGQ~FI~~TI~~FGslt~t~I~t  275 (327)
T KOG1581|consen  202 SLHMMFGVNLFSAILNGTYLILQGHL-L-P----AVSFIKEHPDVAFDILLYSTCGAVGQLFIFYTIERFGSLTFTTIMT  275 (327)
T ss_pred             HhHHHHHHHHHHHHHHHHhhhcCCCC-c-h----HHHHHHcChhHHHHHHHHHHhhhhhhheehhhHhhcccHHHHHHHH
Confidence            55333333468888887764332110 0 0    01122222222   33444566667777777777777776665555


Q ss_pred             HHHHHHHHHHHHHcCCCccHHHHHHHHHHHHHhHhccCCCCC
Q 026565          170 MAMLLTMVLSVYLFNFKPTLQLFLGIIICMMSLHMYFAPPGM  211 (237)
Q Consensus       170 ~siv~s~lls~~~f~~~~t~~~~vG~~lV~~s~~lY~~~~~~  211 (237)
                      .==.+++++|++.||+++++..++|..+|+.|+++-....++
T Consensus       276 tRk~~si~lS~i~f~h~~s~~q~~g~~iVFg~i~l~~~~k~~  317 (327)
T KOG1581|consen  276 TRKMVSIMLSCIVFGHPLSSEQWLGVLIVFGGIFLEILLKKK  317 (327)
T ss_pred             HHHHHHHHHHHHHhCCccchhhccCeeeehHHHHHHHHHHHh
Confidence            555789999999999999999999999999999877665555

>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]

Probab=99.30  E-value=5.7e-10  Score=96.06  Aligned_cols=182  Identities=20%  Similarity=0.260  Sum_probs=119.0

Q ss_pred             ChhHHHHHHHHH-HHhcCCCCHHHHHHHHHHHHHHhhhcccCCCccccCcccccchhHHHHHHHHHHHHHHHHHHHHHHh
Q 026565            8 TRPFHFSLKFSR-LFLRRRLSTLQWMAIVLLAVGTTTSQVKGCGEALCDSLFAAPIQGYLLGVLSACLSALAGVYTEFLM   86 (237)
Q Consensus         8 ~~p~~~tall~~-~~L~~~ls~~qw~al~ll~~Gv~l~~~~~~~~~~~~~~~~~~~~G~~~~l~~a~~sa~a~vy~E~~~   86 (237)
                      +.|+ +++++++ +++|||.++++|.++++.+.|+.++..++.....     . +..|.++.+++++..++..++.++..
T Consensus       105 ~~p~-~~~~~~~~~~~~e~~~~~~~~~~~~~~~Gv~lv~~~~~~~~~-----~-~~~g~~~~l~a~~~~a~~~~~~~~~~  177 (292)
T COG0697         105 LLPL-FTALLAVLLLLGERLSLLQILGILLALAGVLLILLGGGGGGI-----L-SLLGLLLALAAALLWALYTALVKRLS  177 (292)
T ss_pred             HHHH-HHHHHHHHHHccCCCcHHHHHHHHHHHHhHHheecCCCcchh-----H-HHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence            4566 8899997 7779999999999999999999999876643210     1 57899999999999999999999987


Q ss_pred             hcCCchhHHHHHH-HHHHHHHHHHHHHHhhccccccccCccccccccccchHHHHHHHHHHHhhhhhhhhhhhhhHHHHH
Q 026565           87 KKNNDSLYWQNVQ-LYTFGAIFNMFRLLLDDFRGGFEKGPWWQRLFDGYNITTWMVVFNLGSTGLLVSWLMKYADNIIKV  165 (237)
Q Consensus        87 K~~~~~~~~~n~~-L~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~il~~a~~Gl~va~vlk~~d~i~k~  165 (237)
                       +.+.. .  ... +...+...........+..   ...     ....+....+..++...++..+....++..+...-+
T Consensus       178 -~~~~~-~--~~~~~~~~~~~~~~~~~~~~~~~---~~~-----~~~~~~~~~~~g~~~~~i~~~~~~~~~~~~~~~~~~  245 (292)
T COG0697         178 -RLGPV-T--LALLLQLLLALLLLLLFFLSGFG---API-----LSRAWLLLLYLGVFSTGLAYLLWYYALRLLGASLVA  245 (292)
T ss_pred             -CCChH-H--HHHHHHHHHHHHHHHHHHhcccc---ccC-----CHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchHHH
Confidence             33221 1  111 1111111111111111111   000     111121122222222223333344455666666666


Q ss_pred             HHHHHHHHHHHHHHHHHcCCCccHHHHHHHHHHHHHhHhccCC
Q 026565          166 YSTSMAMLLTMVLSVYLFNFKPTLQLFLGIIICMMSLHMYFAP  208 (237)
Q Consensus       166 ~a~s~siv~s~lls~~~f~~~~t~~~~vG~~lV~~s~~lY~~~  208 (237)
                      ....+.++.+.+++++++||+++...++|.++++.|+.+....
T Consensus       246 ~~~~~~~v~~~~~~~l~~~e~~~~~~~~G~~li~~g~~l~~~~  288 (292)
T COG0697         246 LLSLLEPVFAALLGVLLLGEPLSPAQLLGAALVVLGVLLASLR  288 (292)
T ss_pred             HHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHhcc
Confidence            6667888999999999999999999999999999999998866

>KOG1441 consensus Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [Carbohydrate transport and metabolism; Amino acid transport and metabolism]

Probab=99.20  E-value=2.9e-12  Score=113.16  Aligned_cols=190  Identities=17%  Similarity=0.250  Sum_probs=135.7

Q ss_pred             cCCChhHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhhhcccCCCccccCcccccchhHHHHHHHHHHHHHHHHHHHHH
Q 026565            5 SMITRPFHFSLKFSRLFLRRRLSTLQWMAIVLLAVGTTTSQVKGCGEALCDSLFAAPIQGYLLGVLSACLSALAGVYTEF   84 (237)
Q Consensus         5 ~~i~~p~~~tall~~~~L~~~ls~~qw~al~ll~~Gv~l~~~~~~~~~~~~~~~~~~~~G~~~~l~~a~~sa~a~vy~E~   84 (237)
                      .+..+|. +|.++++++.+|++++.-|.+++.++.||.++...+.         +..+.|++.++.+.+..++.+++.++
T Consensus       115 iKa~~P~-~tvl~~~~~~~~~~s~~~~lsL~piv~GV~ias~~e~---------~fn~~G~i~a~~s~~~~al~~I~~~~  184 (316)
T KOG1441|consen  115 IKALMPP-FTVLLSVLLLGKTYSSMTYLSLLPIVFGVAIASVTEL---------SFNLFGFISAMISNLAFALRNILSKK  184 (316)
T ss_pred             HHhhcch-hHHHHHHHHhCCCCcceEEEEEEEeeeeEEEeeeccc---------cccHHHHHHHHHHHHHHHHHHHHHHH
Confidence            3455677 9999999999999999999999999999999987543         34689999999999999999999999


Q ss_pred             HhhcCCchhHHHHHHHHHHHHHHHHHHHH-----hhccccccccCccccccccccchHHHHHHHHHH---Hhhhhhhhhh
Q 026565           85 LMKKNNDSLYWQNVQLYTFGAIFNMFRLL-----LDDFRGGFEKGPWWQRLFDGYNITTWMVVFNLG---STGLLVSWLM  156 (237)
Q Consensus        85 ~~K~~~~~~~~~n~~L~~~~~~~~~~~~~-----~~~~~~~~~~g~~~~~~~~g~~~~~~~~il~~a---~~Gl~va~vl  156 (237)
                      ++++++.++.  +++++.+-.++.++..+     ..+.... . + +   ....|+...+..+++..   ...+..-.++
T Consensus       185 ll~~~~~~~~--~~~ll~y~ap~s~~~Ll~P~~~~~~~~~~-~-~-~---~~~~~~~~~~~~~~~sv~~f~~Nls~f~~i  256 (316)
T KOG1441|consen  185 LLTSKGESLN--SMNLLYYTAPISLIFLLIPFLDYVEGNKF-V-G-F---LTAPWFVTFLILLLNSVLAFLLNLSAFLVI  256 (316)
T ss_pred             hhhccccccC--chHHHHHhhhHHHHHHhcchHhhhcccce-e-e-e---eccccchhhHHHHHHHHHHHHHHHHHHHHH
Confidence            9976554443  55554444444444332     1111111 0 0 0   11122222222222221   1134455666


Q ss_pred             hhhhHHHHHHHHHHHHHHHHHHHHHHcCCCccHHHHHHHHHHHHHhHhccCCCCCC
Q 026565          157 KYADNIIKVYSTSMAMLLTMVLSVYLFNFKPTLQLFLGIIICMMSLHMYFAPPGML  212 (237)
Q Consensus       157 k~~d~i~k~~a~s~siv~s~lls~~~f~~~~t~~~~vG~~lV~~s~~lY~~~~~~~  212 (237)
                      .+..+++-.++..+..++.++.|+++|++|.|+....|..+.+.|+++|+....+.
T Consensus       257 g~tSalT~~V~g~~K~~~vi~~s~~iF~~pvt~~n~~G~~iai~Gv~~Y~~~k~~~  312 (316)
T KOG1441|consen  257 GRTSALTYSVAGHMKRIVVIVVSWLIFGNPVTFLNALGYAIAILGVFLYSRAKLKE  312 (316)
T ss_pred             cccCchhhhhhccceEEEEEEeEeeeecCCCchhhHHHHHHHHHHHHHHHHHhhhh
Confidence            77778888888888888999999999999999999999999999999999865543

>PRK10532 threonine and homoserine efflux system; Provisional

Probab=99.20  E-value=1.9e-09  Score=94.68  Aligned_cols=178  Identities=13%  Similarity=-0.006  Sum_probs=111.9

Q ss_pred             ChhHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhhhcccCCCccccCcccccchhHHHHHHHHHHHHHHHHHHHHHHhh
Q 026565            8 TRPFHFSLKFSRLFLRRRLSTLQWMAIVLLAVGTTTSQVKGCGEALCDSLFAAPIQGYLLGVLSACLSALAGVYTEFLMK   87 (237)
Q Consensus         8 ~~p~~~tall~~~~L~~~ls~~qw~al~ll~~Gv~l~~~~~~~~~~~~~~~~~~~~G~~~~l~~a~~sa~a~vy~E~~~K   87 (237)
                      +.|+ ++++++    +|+.+..+|  +.+.++|+.++..++.+.      .+....|.+++++++++.++..++.+|..+
T Consensus       106 t~Pi-~~~ll~----~~~~~~~~~--~~i~~~Gv~li~~~~~~~------~~~~~~G~ll~l~aa~~~a~~~v~~r~~~~  172 (293)
T PRK10532        106 TGPL-AVALFS----SRRPVDFVW--VVLAVLGLWFLLPLGQDV------SHVDLTGAALALGAGACWAIYILSGQRAGA  172 (293)
T ss_pred             HHHH-HHHHHh----cCChHHHHH--HHHHHHHHheeeecCCCc------ccCChHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence            4455 555544    355555555  456688988765332211      122457999999999999999999998876


Q ss_pred             cCCchhHHHHHHHHHHHHHHHHHHHHhhccccccccCccccccccccchHHHHHHHHHHHhhhhhhhhhhhhhHHHHHHH
Q 026565           88 KNNDSLYWQNVQLYTFGAIFNMFRLLLDDFRGGFEKGPWWQRLFDGYNITTWMVVFNLGSTGLLVSWLMKYADNIIKVYS  167 (237)
Q Consensus        88 ~~~~~~~~~n~~L~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~il~~a~~Gl~va~vlk~~d~i~k~~a  167 (237)
                      +++ +.. ...+. .++.+.........+..   ...     -...+....+..++...++..+....+|+.++..-+..
T Consensus       173 ~~~-~~~-~~~~~-~~~~~~l~~~~~~~~~~---~~~-----~~~~~~~~l~lgv~~t~~~~~l~~~~~~~~~a~~as~~  241 (293)
T PRK10532        173 EHG-PAT-VAIGS-LIAALIFVPIGALQAGE---ALW-----HWSILPLGLAVAILSTALPYSLEMIALTRLPTRTFGTL  241 (293)
T ss_pred             cCC-chH-HHHHH-HHHHHHHHHHHHHccCc---ccC-----CHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhHHHHH
Confidence            654 222 12222 23322222222221110   000     00011111233334444444555566788888888999


Q ss_pred             HHHHHHHHHHHHHHHcCCCccHHHHHHHHHHHHHhHhccCCC
Q 026565          168 TSMAMLLTMVLSVYLFNFKPTLQLFLGIIICMMSLHMYFAPP  209 (237)
Q Consensus       168 ~s~siv~s~lls~~~f~~~~t~~~~vG~~lV~~s~~lY~~~~  209 (237)
                      ..+.++++.++++++|||+++...++|.++|+.|+..++...
T Consensus       242 ~~l~Pv~a~l~~~l~lgE~~~~~~~iG~~lIl~~~~~~~~~~  283 (293)
T PRK10532        242 MSMEPALAAVSGMIFLGETLTLIQWLALGAIIAASMGSTLTI  283 (293)
T ss_pred             HHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHhcC
Confidence            999999999999999999999999999999999999997654

>KOG3912 consensus Predicted integral membrane protein [General function prediction only]

Probab=99.08  E-value=2.8e-09  Score=91.55  Aligned_cols=193  Identities=21%  Similarity=0.248  Sum_probs=122.2

Q ss_pred             HHHHHHHHHhcCCCCHHHHHHHHHHHHHHhhhcccCCCccc-cCcccccchhHHHHHHHHHHHHHHHHHHHHHHhhcCCc
Q 026565           13 FSLKFSRLFLRRRLSTLQWMAIVLLAVGTTTSQVKGCGEAL-CDSLFAAPIQGYLLGVLSACLSALAGVYTEFLMKKNND   91 (237)
Q Consensus        13 ~tall~~~~L~~~ls~~qw~al~ll~~Gv~l~~~~~~~~~~-~~~~~~~~~~G~~~~l~~a~~sa~a~vy~E~~~K~~~~   91 (237)
                      |+++|+..+|+|+++.+||+++....+|++++...+...++ +-+..++.+.|.++.+.+.+.-|.--++-||.+|+++.
T Consensus       125 Fvglfst~~Ln~ti~~~qWl~i~fv~lGlviVg~~d~~~~~~p~~d~s~iitGdllIiiaqiivaiQ~v~Eek~l~~~nV  204 (372)
T KOG3912|consen  125 FVGLFSTMFLNRTITGRQWLGILFVSLGLVIVGSLDVHLVTDPYTDYSSIITGDLLIIIAQIIVAIQMVCEEKQLKKSNV  204 (372)
T ss_pred             hhHHHHHHHHhcccchhhHHHHHHHHhhhheeeeeecccccCCccccccchhhhHHHHHHHHHHHHHHHHHHhhhhhccC
Confidence            99999999999999999999999999999999876543221 11123567899999999999999999999999999875


Q ss_pred             hhHHHHHHH-HHHHH-HHHHHHH---Hhhcccccc--ccCccccccccccchHHHHHHHHHHHhhhhhh---------hh
Q 026565           92 SLYWQNVQL-YTFGA-IFNMFRL---LLDDFRGGF--EKGPWWQRLFDGYNITTWMVVFNLGSTGLLVS---------WL  155 (237)
Q Consensus        92 ~~~~~n~~L-~~~~~-~~~~~~~---~~~~~~~~~--~~g~~~~~~~~g~~~~~~~~il~~a~~Gl~va---------~v  155 (237)
                      +-- |.+-. ..+|. .++++..   +....+...  ..|. +.+..+-|....--..+..+..|..++         .+
T Consensus       205 ~pl-~avg~eGlfG~v~~slL~i~m~yi~~~~sfS~~~~g~-~eD~~~~~~~~~e~p~l~val~~~~vSiAffNfaGlsi  282 (372)
T KOG3912|consen  205 APL-QAVGWEGLFGLVILSLLAIPMYYIPSGDSFSCNPRGV-LEDWGDAFAALQESPSLAVALIGFTVSIAFFNFAGLSI  282 (372)
T ss_pred             CHH-HHhhhhhhHHHHHHHHHHHHHhheecCCcCcCCCCcc-hhhHHHHHHHhcCCchhHHHHhhhhhheeeeeehhhHH
Confidence            311 22211 24553 2233222   111111111  1110 111122121100000011122333333         23


Q ss_pred             hhhhhHHHHHHHHHHHHHHHHHHHHHHcCCCccHHHHHHHHHHHHHhHhccC
Q 026565          156 MKYADNIIKVYSTSMAMLLTMVLSVYLFNFKPTLQLFLGIIICMMSLHMYFA  207 (237)
Q Consensus       156 lk~~d~i~k~~a~s~siv~s~lls~~~f~~~~t~~~~vG~~lV~~s~~lY~~  207 (237)
                      .|+.++-.+....++-....=+++...+.|.+....++|..+.+.|+++|+.
T Consensus       283 tk~~SattRmllD~lRt~~IWv~si~m~~E~f~llqilGFliLi~Gi~lY~~  334 (372)
T KOG3912|consen  283 TKELSATTRMLLDSLRTYVIWVFSIAMGWEYFHLLQILGFLILIMGIILYNQ  334 (372)
T ss_pred             HHHhhHHHHHHHHhhhhhhhhHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            4666666666666666666677777888899999999999999999999986

>KOG2766 consensus Predicted membrane protein [Function unknown]

Probab=99.03  E-value=3.1e-11  Score=102.28  Aligned_cols=185  Identities=18%  Similarity=0.203  Sum_probs=135.3

Q ss_pred             HHHHHHHHHhcCCCCHHHHHHHHHHHHHHhhhcccCCCccccCcccccchhHHHHHHHHHHHHHHHHHHHHHHhhcCCch
Q 026565           13 FSLKFSRLFLRRRLSTLQWMAIVLLAVGTTTSQVKGCGEALCDSLFAAPIQGYLLGVLSACLSALAGVYTEFLMKKNNDS   92 (237)
Q Consensus        13 ~tall~~~~L~~~ls~~qw~al~ll~~Gv~l~~~~~~~~~~~~~~~~~~~~G~~~~l~~a~~sa~a~vy~E~~~K~~~~~   92 (237)
                      ...+++|++||-|+.+.|+.+++.+.+|+.++..++.+.. ...+..+|..|..+++.+|.++|.+++..|...|+-+.-
T Consensus       117 ~v~~lsw~fLktrYrlmki~gV~iCi~GvvmvV~sDV~ag-d~aggsnp~~GD~lvi~GATlYaVSNv~EEflvkn~d~~  195 (336)
T KOG2766|consen  117 CVLVLSWFFLKTRYRLMKISGVVICIVGVVMVVFSDVHAG-DRAGGSNPVKGDFLVIAGATLYAVSNVSEEFLVKNADRV  195 (336)
T ss_pred             HHHHHHHHHHHHHHhhheeeeEEeEecceEEEEEeeeccc-cccCCCCCccCcEEEEecceeeeeccccHHHHHhcCcHH
Confidence            4678999999999999999999999999999998887652 123457899999999999999999999999999987532


Q ss_pred             hHHHHHHHHHHHHHHHHHHHHhhccccccccCccccccccccchHHHHH---HHHHHHhhhhhhhhhhhhhHHHHHHHHH
Q 026565           93 LYWQNVQLYTFGAIFNMFRLLLDDFRGGFEKGPWWQRLFDGYNITTWMV---VFNLGSTGLLVSWLMKYADNIIKVYSTS  169 (237)
Q Consensus        93 ~~~~n~~L~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~---il~~a~~Gl~va~vlk~~d~i~k~~a~s  169 (237)
                        .-.-++.++|.+++.+....+ ..+...         ..|++.....   .+...+-.-+...++|..++-.-+...-
T Consensus       196 --elm~~lgLfGaIIsaIQ~i~~-~~~~~t---------l~w~~~i~~yl~f~L~MFllYsl~pil~k~~~aT~~nlslL  263 (336)
T KOG2766|consen  196 --ELMGFLGLFGAIISAIQFIFE-RHHVST---------LHWDSAIFLYLRFALTMFLLYSLAPILIKTNSATMFNLSLL  263 (336)
T ss_pred             --HHHHHHHHHHHHHHHHHHhhh-ccceee---------EeehHHHHHHHHHHHHHHHHHHhhHHheecCCceEEEhhHh
Confidence              223477789999999884433 222211         0122211111   1122222445556667666666666777


Q ss_pred             HHHHHHHHHHHHHcCCCccHHHHHHHHHHHHHhHhccCCCCCC
Q 026565          170 MAMLLTMVLSVYLFNFKPTLQLFLGIIICMMSLHMYFAPPGML  212 (237)
Q Consensus       170 ~siv~s~lls~~~f~~~~t~~~~vG~~lV~~s~~lY~~~~~~~  212 (237)
                      .+-.++.++  ..||-+.+|.+++..+.+..|.++|+...+.+
T Consensus       264 TsDmwsl~i--~~FgYhv~wLY~laF~~i~~GliiYs~re~~~  304 (336)
T KOG2766|consen  264 TSDMWSLLI--RTFGYHVDWLYFLAFATIATGLIIYSTREKDE  304 (336)
T ss_pred             HHHHHHHHH--HHHhcchhhhhHHHHHHHHHhhEEeeccccCc
Confidence            778888888  67888899999999999999999997655543

>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins

Probab=99.03  E-value=1.3e-08  Score=80.35  Aligned_cols=141  Identities=21%  Similarity=0.225  Sum_probs=94.7

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhcC---CchhHHHHHHHH--HHHHHHHHHHHHhhccccccccCcccccccc-cc--c
Q 026565           64 GYLLGVLSACLSALAGVYTEFLMKKN---NDSLYWQNVQLY--TFGAIFNMFRLLLDDFRGGFEKGPWWQRLFD-GY--N  135 (237)
Q Consensus        64 G~~~~l~~a~~sa~a~vy~E~~~K~~---~~~~~~~n~~L~--~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~-g~--~  135 (237)
                      |+.+++.+++++++..++.|+.+|+.   +.....-++++|  ..+.++.++.....|.....+..   ..... ..  .
T Consensus         1 G~~~~l~s~~~~al~~v~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~l~~~~~~~e~~~~~~~~---~~~~~~~~~~~   77 (153)
T PF03151_consen    1 GFILALASSLFSALRNVLIKKLLKKVSSNSKKLNPLNLLYYNSPISFIILLPLAFLLEGPQLSSFF---SEIFGEELSSD   77 (153)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHH---HHhhhhhhcch
Confidence            67899999999999999999999984   112222234333  45555555544444433221110   00111 01  1


Q ss_pred             hHHHHHHHHHHH----hhhhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHcCCCccHHHHHHHHHHHHHhHhccC
Q 026565          136 ITTWMVVFNLGS----TGLLVSWLMKYADNIIKVYSTSMAMLLTMVLSVYLFNFKPTLQLFLGIIICMMSLHMYFA  207 (237)
Q Consensus       136 ~~~~~~il~~a~----~Gl~va~vlk~~d~i~k~~a~s~siv~s~lls~~~f~~~~t~~~~vG~~lV~~s~~lY~~  207 (237)
                      +..+..++..++    ..+..-.++|+.+++..+....+..++.+++|+++|||++|...++|..+.+.|.++|+.
T Consensus        78 ~~~~~~~~~~~~~~~~~n~~~f~~i~~tS~lt~~v~~~~K~~~~i~~s~~~f~~~~t~~~~~G~~l~~~G~~~Ysy  153 (153)
T PF03151_consen   78 PNFIFLLILSGLLAFLYNLSSFLLIKLTSPLTYSVLGNVKRILVILLSVIFFGEPITPLQIIGIVLALVGVLLYSY  153 (153)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhhhcChhHHHHHHHHHHHHHHHHHhhhcCCcCCHHHHHHHHHHHHHHheeeC
Confidence            122222222222    234444777999999999999999999999999999999999999999999999999973

O49724 from SWISSPROT contains three repeats of this region. In other proteins, the aligned region is located towards the C terminus. The function of the aligned region is unknown.

>KOG1582 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=99.00  E-value=5.6e-09  Score=89.41  Aligned_cols=203  Identities=18%  Similarity=0.196  Sum_probs=125.4

Q ss_pred             HHHHHHHHhcCCCCHHHHHHHHHHHHHHhhhcccCCCccccCcccccchhHHHHHHHHHHHHHHHHHHHHHHhhcCCchh
Q 026565           14 SLKFSRLFLRRRLSTLQWMAIVLLAVGTTTSQVKGCGEALCDSLFAAPIQGYLLGVLSACLSALAGVYTEFLMKKNNDSL   93 (237)
Q Consensus        14 tall~~~~L~~~ls~~qw~al~ll~~Gv~l~~~~~~~~~~~~~~~~~~~~G~~~~l~~a~~sa~a~vy~E~~~K~~~~~~   93 (237)
                      +++-+.++-++|+.+..+.|-.++..|+++..+.|.+.+     ......|+.+.-.+-+.-|+-|=.+||.+|.++.+-
T Consensus       146 VmiggifIqGkRY~v~d~~aA~lm~lGli~FTLADs~~s-----PNF~~~Gv~mIsgALl~DA~iGNvQEk~m~~~~~ss  220 (367)
T KOG1582|consen  146 VMIGGIFIQGKRYGVHDYIAAMLMSLGLIWFTLADSQTS-----PNFNLIGVMMISGALLADAVIGNVQEKAMKMNPASS  220 (367)
T ss_pred             hhheeeeeccccccHHHHHHHHHHHHHHHhhhhcccccC-----CCcceeeHHHHHHHHHHHHHhhHHHHHHHhhCCCCc
Confidence            467778889999999999999999999999998876543     234577887666666677888888999999876542


Q ss_pred             HHHHHHH-HHHHHHHHHHHHHhhccccccccCccccccccccc-----hH-HHHHHHHHHHh-hhhhhhhh---hhhhHH
Q 026565           94 YWQNVQL-YTFGAIFNMFRLLLDDFRGGFEKGPWWQRLFDGYN-----IT-TWMVVFNLGST-GLLVSWLM---KYADNI  162 (237)
Q Consensus        94 ~~~n~~L-~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~-----~~-~~~~il~~a~~-Gl~va~vl---k~~d~i  162 (237)
                       .+.+++ |..|.++.+....+.+            ++|.+|+     ++ ++...+.-++. .+-+..|+   |..++.
T Consensus       221 -~EmvfySy~iG~vflf~~mvlTg------------e~f~a~~fcaehp~~tyGy~~~~s~~gylG~~~VLalI~~fGA~  287 (367)
T KOG1582|consen  221 -SEMVFYSYGIGFVFLFAPMVLTG------------ELFSAWTFCAEHPVRTYGYAFLFSLAGYLGIVFVLALIKLFGAL  287 (367)
T ss_pred             -ceEEEeeecccHHHHHHHHHhcc------------cchhhhHHHHhCcHhHHHHHHHHHHHhHhhHHHHHHHHHHhchh
Confidence             122222 2445555544443321            1222222     12 34333333332 23333333   333333


Q ss_pred             HHHHHHHHHHHHHHHHHHHHcCCCccHHHHHHHHHHHHHhHhccCCC--CCC-CCCC--CcCcCCCchhhhhhhhhc
Q 026565          163 IKVYSTSMAMLLTMVLSVYLFNFKPTLQLFLGIIICMMSLHMYFAPP--GML-VDIP--STAKAAPDSLREVSVERR  234 (237)
Q Consensus       163 ~k~~a~s~siv~s~lls~~~f~~~~t~~~~vG~~lV~~s~~lY~~~~--~~~-~~~~--~~~~~~~~~~~~~~~~~~  234 (237)
                      ..+..++.-=-+++++|.++|..|+|.++.-|..+|+.|+|+-..+.  +.+ .+++  ..+.++.+..+|+++||+
T Consensus       288 ~aatvTTaRKavTi~lSfllFsKPfT~qy~~~gllv~lgI~Ln~ysk~nk~~~~~~~~r~~~~~~g~~~~~~~r~~~  364 (367)
T KOG1582|consen  288 IAATVTTARKAVTILLSFLLFSKPFTEQYVWSGLLVVLGIYLNMYSKRNKIPLASLIRRIVARAAGKVDRSVDRKDP  364 (367)
T ss_pred             HHHHHHHhHhHHHHHHHHHHHcCchHHHHhhhhHHHHHHHHhhcccCCCCCchhhHHhhhhhhhccccccccccccc
Confidence            33333333235799999999999999999999999999999754432  211 2221  222333455666666665

>COG2962 RarD Predicted permeases [General function prediction only]

Probab=98.79  E-value=9.8e-07  Score=76.48  Aligned_cols=172  Identities=21%  Similarity=0.211  Sum_probs=110.7

Q ss_pred             hHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhhhcccCCCccccCcccccchhHHHHHHHHHHHHHHHHHHHHHHhhcC
Q 026565           10 PFHFSLKFSRLFLRRRLSTLQWMAIVLLAVGTTTSQVKGCGEALCDSLFAAPIQGYLLGVLSACLSALAGVYTEFLMKKN   89 (237)
Q Consensus        10 p~~~tall~~~~L~~~ls~~qw~al~ll~~Gv~l~~~~~~~~~~~~~~~~~~~~G~~~~l~~a~~sa~a~vy~E~~~K~~   89 (237)
                      |+ +..+++.+++|||+|+.||+|+++.++||..-.+...         +-|+..+    .-|+..++=+.. +|..|-+
T Consensus       109 PL-~~VllG~lflkErls~~Q~iAV~lA~~GV~~~~~~~g---------~lpwval----~la~sf~~Ygl~-RK~~~v~  173 (293)
T COG2962         109 PL-VNVLLGRLFLKERLSRLQWIAVGLAAAGVLIQTWLLG---------SLPWVAL----ALALSFGLYGLL-RKKLKVD  173 (293)
T ss_pred             HH-HHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHcC---------CCcHHHH----HHHHHHHHHHHH-HHhcCCc
Confidence            66 8999999999999999999999999999988765432         2355433    334455555554 4544443


Q ss_pred             C-chhHHHHHHHHHHHHHHHHHHHH-hhccccccccCccccccccccchHHHHHHHHHHHhhhhhhh---hhhhhhHHHH
Q 026565           90 N-DSLYWQNVQLYTFGAIFNMFRLL-LDDFRGGFEKGPWWQRLFDGYNITTWMVVFNLGSTGLLVSW---LMKYADNIIK  164 (237)
Q Consensus        90 ~-~~~~~~n~~L~~~~~~~~~~~~~-~~~~~~~~~~g~~~~~~~~g~~~~~~~~il~~a~~Gl~va~---vlk~~d~i~k  164 (237)
                      . .++-.+.+.+...+    ++..+ .+|..+.         ..++-+...+++++...++.+....   --|+..=.+-
T Consensus       174 a~~g~~lE~l~l~p~a----l~yl~~l~~~~~~---------~~~~~~~~~~LLv~aG~vTavpL~lf~~aa~~lpls~~  240 (293)
T COG2962         174 ALTGLTLETLLLLPVA----LIYLLFLADSGQF---------LQQNANSLWLLLVLAGLVTAVPLLLFAAAAKRLPLSTL  240 (293)
T ss_pred             hHHhHHHHHHHHhHHH----HHHHHHHhcCchh---------hhcCCchHHHHHHHhhHHHHHHHHHHHHHHhcCCHHHH
Confidence            2 24555555554333    22222 2222110         1101122233444443333332222   2255555667


Q ss_pred             HHHHHHHHHHHHHHHHHHcCCCccHHHHHHHHHHHHHhHhccCCC
Q 026565          165 VYSTSMAMLLTMVLSVYLFNFKPTLQLFLGIIICMMSLHMYFAPP  209 (237)
Q Consensus       165 ~~a~s~siv~s~lls~~~f~~~~t~~~~vG~~lV~~s~~lY~~~~  209 (237)
                      ++.....+..-.++++++||||++...++..+.+-.|..+|+.+.
T Consensus       241 G~lqYi~Ptl~fllav~i~~E~~~~~~~~~F~~IW~aL~l~~~d~  285 (293)
T COG2962         241 GFLQYIEPTLMFLLAVLIFGEPFDSDQLVTFAFIWLALALFSIDG  285 (293)
T ss_pred             HHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHH
Confidence            889999999999999999999999999999999999999998753

>KOG2765 consensus Predicted membrane protein [Function unknown]

Probab=98.78  E-value=7e-08  Score=85.96  Aligned_cols=186  Identities=21%  Similarity=0.275  Sum_probs=121.4

Q ss_pred             HHHHHHHHHhcCCCCHHHHHHHHHHHHHHhhhcccCCCccccCcccccchhHHHHHHHHHHHHHHHHHHHHHHhhcCCch
Q 026565           13 FSLKFSRLFLRRRLSTLQWMAIVLLAVGTTTSQVKGCGEALCDSLFAAPIQGYLLGVLSACLSALAGVYTEFLMKKNNDS   92 (237)
Q Consensus        13 ~tall~~~~L~~~ls~~qw~al~ll~~Gv~l~~~~~~~~~~~~~~~~~~~~G~~~~l~~a~~sa~a~vy~E~~~K~~~~~   92 (237)
                      ||-.++.++..+|+|..+.+++.+-++|++++..++.++. .+....+++.|.++++++|+++|.-.+..+|-..+++..
T Consensus       198 FtL~la~if~~e~ft~sKllav~~si~GViiVt~~~s~~~-~~~~a~~~llG~llaL~sA~~YavY~vllk~~~~~eg~r  276 (416)
T KOG2765|consen  198 FTLFLAAIFPVERFTLSKLLAVFVSIAGVIIVTMGDSKQN-SDLPASRPLLGNLLALLSALLYAVYTVLLKRKIGDEGER  276 (416)
T ss_pred             HHHHHHHHcCcchhhHHHHHHHHHhhccEEEEEecccccc-ccCCccchhHHHHHHHHHHHHHHHHHHHHHhhccccccc
Confidence            8999999999999999999999999999999998766442 122346689999999999999988888777765555322


Q ss_pred             hHHHHHHHHHHHHHHHHHHHH----hhccccccccCccccccccccch-HHHHHHHHHHHhhhhhhhhh-----hhhhHH
Q 026565           93 LYWQNVQLYTFGAIFNMFRLL----LDDFRGGFEKGPWWQRLFDGYNI-TTWMVVFNLGSTGLLVSWLM-----KYADNI  162 (237)
Q Consensus        93 ~~~~n~~L~~~~~~~~~~~~~----~~~~~~~~~~g~~~~~~~~g~~~-~~~~~il~~a~~Gl~va~vl-----k~~d~i  162 (237)
                      .-+ ++++.+.| +++++..+    +-+.-...        -|.--+. ..-.+++.+ +.|..++=.+     -..+..
T Consensus       277 vdi-~lffGfvG-LfnllllwP~l~iL~~~~~e--------~F~lP~~~q~~~vv~~~-ligtvvSDylW~~a~~lTs~L  345 (416)
T KOG2765|consen  277 VDI-QLFFGFVG-LFNLLLLWPPLIILDFFGEE--------RFELPSSTQFSLVVFNN-LIGTVVSDYLWAKAVLLTSPL  345 (416)
T ss_pred             ccH-HHHHHHHH-HHHHHHHhHHHHHHHHhccC--------cccCCCCceeEeeeHhh-HHHHHHHHHHHHHHHHhccch
Confidence            222 22332333 33433221    11111000        0000011 111222222 3333333111     112455


Q ss_pred             HHHHHHHHHHHHHHHHHHHHcCCCccHHHHHHHHHHHHHhHhccCCCC
Q 026565          163 IKVYSTSMAMLLTMVLSVYLFNFKPTLQLFLGIIICMMSLHMYFAPPG  210 (237)
Q Consensus       163 ~k~~a~s~siv~s~lls~~~f~~~~t~~~~vG~~lV~~s~~lY~~~~~  210 (237)
                      +.+.+.+++|.++.+...++=+.++|+.+++|+..|++|-++-+.+.+
T Consensus       346 v~TlgmSltIPLA~~aD~l~k~~~~S~~~iiGsi~Ifv~Fv~vn~~~~  393 (416)
T KOG2765|consen  346 VVTLGMSLTIPLAMFADVLIKGKHPSALYIIGSIPIFVGFVIVNISSE  393 (416)
T ss_pred             hheeeeeEeeeHHHHHHHHHcCCCCCHHHHHHHHHHHHHHhheecccc
Confidence            566677777899999999999999999999999999999998887644

>TIGR00688 rarD rarD protein

Probab=98.71  E-value=9.3e-07  Score=75.95  Aligned_cols=151  Identities=15%  Similarity=0.158  Sum_probs=91.9

Q ss_pred             ChhHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhhhcccCCCccccCcccccchhHHHHHHHHHHHHHHHHHHHHHHhh
Q 026565            8 TRPFHFSLKFSRLFLRRRLSTLQWMAIVLLAVGTTTSQVKGCGEALCDSLFAAPIQGYLLGVLSACLSALAGVYTEFLMK   87 (237)
Q Consensus         8 ~~p~~~tall~~~~L~~~ls~~qw~al~ll~~Gv~l~~~~~~~~~~~~~~~~~~~~G~~~~l~~a~~sa~a~vy~E~~~K   87 (237)
                      +.|+ ++++++++++|||++++||.++++.++|+.++..++.         +..    .+++++++++++..++.+|.-+
T Consensus       105 ~~Pi-~~~lla~~~l~Ek~~~~~~l~~~~~~~Gv~li~~~~~---------~~~----~~~l~aa~~~a~~~i~~~~~~~  170 (256)
T TIGR00688       105 INPL-VMVALGRVFLKERISRFQFIAVIIATLGVISNIVLKG---------SLP----WEALVLAFSFTAYGLIRKALKN  170 (256)
T ss_pred             HHHH-HHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHcC---------Cch----HHHHHHHHHHHHHHHHHhhcCC
Confidence            4677 9999999999999999999999999999988753311         111    2467788999999999888643


Q ss_pred             cCCchhHHHHHHHHHHHHHHHHHHHHhhccccccccCccccccccccchHHHHHHHHHHHhhhhhhhhhhhhhHHHHHHH
Q 026565           88 KNNDSLYWQNVQLYTFGAIFNMFRLLLDDFRGGFEKGPWWQRLFDGYNITTWMVVFNLGSTGLLVSWLMKYADNIIKVYS  167 (237)
Q Consensus        88 ~~~~~~~~~n~~L~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~il~~a~~Gl~va~vlk~~d~i~k~~a  167 (237)
                      ++.    .+...-+....++........++.....     .+....|.... .......++..+....+||.++-.-+..
T Consensus       171 ~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~l~-~~g~~t~i~~~l~~~a~~~~~a~~~s~~  240 (256)
T TIGR00688       171 TDL----AGFCLETLSLMPVAIYYLLQTDFATVQQ-----TNPFPIWLLLV-LAGLITGTPLLAFVIAANRLPLNLLGLL  240 (256)
T ss_pred             CCc----chHHHHHHHHHHHHHHHHHHhccCcccc-----cCchhHHHHHH-HHHHHHHHHHHHHHHHHHcCChHHHHHH
Confidence            221    1111111222222222111112111000     00000121111 1122244455666677899999999999


Q ss_pred             HHHHHHHHHHHHHHH
Q 026565          168 TSMAMLLTMVLSVYL  182 (237)
Q Consensus       168 ~s~siv~s~lls~~~  182 (237)
                      ..+.++++.++++++
T Consensus       241 ~yl~Pv~~~~~~~~~  255 (256)
T TIGR00688       241 QYIGPTIMMLCVSFL  255 (256)
T ss_pred             HHHHHHHHHHHHHHh
Confidence            999999999998764

This uncharacterized protein is predicted to have many membrane-spanning domains.

>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein

Probab=98.71  E-value=8.4e-07  Score=78.05  Aligned_cols=173  Identities=14%  Similarity=0.164  Sum_probs=109.7

Q ss_pred             HHHHHHHHHhcCCCCHHH----HHHHHHHHHHHhhhcccCCCccccCcccccchhHHHHHHHHHHHHHHHHHHHHHHhhc
Q 026565           13 FSLKFSRLFLRRRLSTLQ----WMAIVLLAVGTTTSQVKGCGEALCDSLFAAPIQGYLLGVLSACLSALAGVYTEFLMKK   88 (237)
Q Consensus        13 ~tall~~~~L~~~ls~~q----w~al~ll~~Gv~l~~~~~~~~~~~~~~~~~~~~G~~~~l~~a~~sa~a~vy~E~~~K~   88 (237)
                      +.++++.+++||+.++++    +.++++.++|+.++..++.++.+ ++...+...|+.+.+++++..++..+..++. + 
T Consensus        99 ~~~l~~~~~f~e~~t~~~~~~~~~g~~l~l~G~~l~~~~~~~~~~-~~~~~~~~~Gi~~~l~sg~~y~~~~~~~~~~-~-  175 (290)
T TIGR00776        99 GGTLFGVIVFGEWSTSIQTLLGLLALILIIIGVYLTSRSKDKSAG-IKSEFNFKKGILLLLMSTIGYLVYVVVAKAF-G-  175 (290)
T ss_pred             HHHHHHHHHhhhccchHHHHHHHHHHHHHHHhHheEEeccccccc-cccccchhhHHHHHHHHHHHHHHHHHHHHHc-C-
Confidence            778899999999999999    99999999999988755422211 0100223569999999999999999998875 2 


Q ss_pred             CCchhHH---HHHHHHHHHHHHHHHHHHhhccccccccCccccccccccchHHHHHHHHH---HHhhhhhhhhhh-hhhH
Q 026565           89 NNDSLYW---QNVQLYTFGAIFNMFRLLLDDFRGGFEKGPWWQRLFDGYNITTWMVVFNL---GSTGLLVSWLMK-YADN  161 (237)
Q Consensus        89 ~~~~~~~---~n~~L~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~il~~---a~~Gl~va~vlk-~~d~  161 (237)
                      ++ +...   |..-+...+++++...  . +      +.|    . .  +...+..++..   .++..+-..-.+ +.+.
T Consensus       176 ~~-~~~~~~~~~~g~~~~~~~~~~~~--~-~------~~~----~-~--~~~~~~~~~~Gi~~~ia~~~y~~~~~~~~~~  238 (290)
T TIGR00776       176 VD-GLSVLLPQAIGMVIGGIIFNLGH--I-L------AKP----L-K--KYAILLNILPGLMWGIGNFFYLFSAQPKVGV  238 (290)
T ss_pred             CC-cceehhHHHHHHHHHHHHHHHHH--h-c------ccc----h-H--HHHHHHHHHHHHHHHHHHHHHHHHcccccch
Confidence            32 2222   3333333444333322  0 0      010    1 0  11112111111   111211112224 5555


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHcCCCccHHHH----HHHHHHHHHhHhc
Q 026565          162 IIKVYSTSMAMLLTMVLSVYLFNFKPTLQLF----LGIIICMMSLHMY  205 (237)
Q Consensus       162 i~k~~a~s~siv~s~lls~~~f~~~~t~~~~----vG~~lV~~s~~lY  205 (237)
                      .....-++..++.+.+.++++|||+.+...+    +|.++++.|+.+-
T Consensus       239 ~~~~~ls~~~pvia~~~~v~~l~E~~~~~~~~~~~iG~~lIi~~~~l~  286 (290)
T TIGR00776       239 ATSFSLSQLGVIISTLGGILILGEKKTKREMIAISVGIILIIIAANIL  286 (290)
T ss_pred             hhHHHHHHHHHHHHHHHHHHHhccCCCcceeehhHHHHHHHHHHHHHH
Confidence            6666677788999999999999999999999    9999999998764

These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.

>KOG4510 consensus Permease of the drug/metabolite transporter (DMT) superfamily [General function prediction only]

Probab=98.64  E-value=2.5e-07  Score=79.29  Aligned_cols=186  Identities=12%  Similarity=0.160  Sum_probs=109.8

Q ss_pred             CCChhHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhhhcccCCC--cc-ccCc--ccccchhHHHHHHHHHHHHHHHHH
Q 026565            6 MITRPFHFSLKFSRLFLRRRLSTLQWMAIVLLAVGTTTSQVKGCG--EA-LCDS--LFAAPIQGYLLGVLSACLSALAGV   80 (237)
Q Consensus         6 ~i~~p~~~tall~~~~L~~~ls~~qw~al~ll~~Gv~l~~~~~~~--~~-~~~~--~~~~~~~G~~~~l~~a~~sa~a~v   80 (237)
                      --+.|. ||.+|++++||||+|...-+...+-..||+++..++.-  ++ ..++  .-+...+|...++.+++..+--=+
T Consensus       130 tFssPv-ft~ifaw~~LkE~~t~~eaL~s~itl~GVVLIvRPpFlFG~~t~g~~~s~~~~~~~gt~aai~s~lf~asvyI  208 (346)
T KOG4510|consen  130 TFSSPV-FTIIFAWAFLKEPFTKFEALGSLITLLGVVLIVRPPFLFGDTTEGEDSSQVEYDIPGTVAAISSVLFGASVYI  208 (346)
T ss_pred             EecChH-HHHHHHHHHHcCCCcHHHHHHHHHhhheEEEEecCCcccCCCccccccccccccCCchHHHHHhHhhhhhHHH
Confidence            346677 99999999999999999999999999999999887641  11 1111  113346677777777666544444


Q ss_pred             HHHHHhhcCCchhHHHHHHH-HHHHHHHHHHHHH-hhccccccccCc-cccccccccchHHHHHHHHHHHhhhhhhhhhh
Q 026565           81 YTEFLMKKNNDSLYWQNVQL-YTFGAIFNMFRLL-LDDFRGGFEKGP-WWQRLFDGYNITTWMVVFNLGSTGLLVSWLMK  157 (237)
Q Consensus        81 y~E~~~K~~~~~~~~~n~~L-~~~~~~~~~~~~~-~~~~~~~~~~g~-~~~~~~~g~~~~~~~~il~~a~~Gl~va~vlk  157 (237)
                      ..+++-|+-+...   .+.+ ...+++.+++... +.+++. +..|. |+.-.+.|.         ...+++++.+.-+.
T Consensus       209 ilR~iGk~~h~~m---svsyf~~i~lV~s~I~~~~ig~~~l-P~cgkdr~l~~~lGv---------fgfigQIllTm~lQ  275 (346)
T KOG4510|consen  209 ILRYIGKNAHAIM---SVSYFSLITLVVSLIGCASIGAVQL-PHCGKDRWLFVNLGV---------FGFIGQILLTMGLQ  275 (346)
T ss_pred             HHHHhhccccEEE---EehHHHHHHHHHHHHHHhhccceec-CccccceEEEEEehh---------hhhHHHHHHHHHhh
Confidence            4455545543211   1222 1233344444322 222221 11121 111111111         12223444443332


Q ss_pred             hhhHHHHHHHHHHHHHHHHHHHHHHcCCCccHHHHHHHHHHHHHhHhc
Q 026565          158 YADNIIKVYSTSMAMLLTMVLSVYLFNFKPTLQLFLGIIICMMSLHMY  205 (237)
Q Consensus       158 ~~d~i~k~~a~s~siv~s~lls~~~f~~~~t~~~~vG~~lV~~s~~lY  205 (237)
                      .=.+---+..++.-++++.+..+++|||.||++.++|+.+|+.|+..-
T Consensus       276 iErAGpvaim~~~dvvfAf~wqv~ff~~~Pt~ws~~Ga~~vvsS~v~~  323 (346)
T KOG4510|consen  276 IERAGPVAIMTYTDVVFAFFWQVLFFGHWPTIWSWVGAVMVVSSTVWV  323 (346)
T ss_pred             hhccCCeehhhHHHHHHHHHHHHHHhcCCChHHHhhceeeeehhHHHH
Confidence            111122256777888999999999999999999999999999887644

>KOG1443 consensus Predicted integral membrane protein [Function unknown]

Probab=98.61  E-value=1.1e-06  Score=76.49  Aligned_cols=187  Identities=20%  Similarity=0.266  Sum_probs=117.6

Q ss_pred             ChhHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhhhcccCCCccccCcccccchhHHHHHHHHHHHHHHHHHHHHHHhh
Q 026565            8 TRPFHFSLKFSRLFLRRRLSTLQWMAIVLLAVGTTTSQVKGCGEALCDSLFAAPIQGYLLGVLSACLSALAGVYTEFLMK   87 (237)
Q Consensus         8 ~~p~~~tall~~~~L~~~ls~~qw~al~ll~~Gv~l~~~~~~~~~~~~~~~~~~~~G~~~~l~~a~~sa~a~vy~E~~~K   87 (237)
                      |.++ |.-+|+.++==|+.++.-...++++.+|+.+..+++.         +..+.|+.+++.+++++|+...+.+++++
T Consensus       119 Ssi~-FIllFs~if~lEk~~w~L~l~v~lI~~Glflft~KsT---------qf~i~Gf~lv~~aS~~sGlRW~~tQ~ll~  188 (349)
T KOG1443|consen  119 SSIL-FILLFSLIFKLEKFRWALVLIVLLIAVGLFLFTYKST---------QFNIEGFFLVLAASLLSGLRWAFTQMLLR  188 (349)
T ss_pred             cHHH-HHHHHHHHHHhHHHHHHHHHHHHHHhhheeEEEeccc---------ceeehhHHHHHHHHHhhhhhHHHHHHHHh
Confidence            3444 8889999998899999999999999999999998775         34578999999999999999999999998


Q ss_pred             cCCchhHHHH-----HHHHHHHHHHHHHHHHhhccccccccCccccccccccchHHHHHHHHHHHhhhhhhhhhhhhhHH
Q 026565           88 KNNDSLYWQN-----VQLYTFGAIFNMFRLLLDDFRGGFEKGPWWQRLFDGYNITTWMVVFNLGSTGLLVSWLMKYADNI  162 (237)
Q Consensus        88 ~~~~~~~~~n-----~~L~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~il~~a~~Gl~va~vlk~~d~i  162 (237)
                      +++.  +.+|     .++..+-.+..++..+..|+.......+ ...+++.+.  .+-.+..-+.+| ..++++-...-.
T Consensus       189 ~~~~--~~~~P~~ti~~l~p~M~~~Ll~~~l~fEG~~~~~~s~-~f~~~d~~~--~~rv~g~i~l~g-~laF~l~~sEfl  262 (349)
T KOG1443|consen  189 NQPS--AKRNPIDTIFHLQPWMSIGLLPLSLLFEGLHLITSSS-IFRFQDTGL--ILRVIGLISLGG-LLAFLLEFSEFL  262 (349)
T ss_pred             cCcc--ccCCCeeeHHHhhhHHHHHHHHHHHHHcccccchhhh-HHHhcCccH--HHHHHHHHHHHH-HHHHHHHHHHHh
Confidence            8751  1111     1222111112222222223222111000 011222222  222222223334 334444333333


Q ss_pred             HHH--------HHHHHHHHHHHHHHHHHcCCCccHHHHHHHHHHHHHhHhccCCCC
Q 026565          163 IKV--------YSTSMAMLLTMVLSVYLFNFKPTLQLFLGIIICMMSLHMYFAPPG  210 (237)
Q Consensus       163 ~k~--------~a~s~siv~s~lls~~~f~~~~t~~~~vG~~lV~~s~~lY~~~~~  210 (237)
                      ++.        .+--+.-+.+.+++....+++++...++|..++..++..|...|.
T Consensus       263 Ll~~Ts~ltlSIaGI~Kel~tl~la~ii~~d~ls~lN~~Gl~i~~agi~~~~~~~~  318 (349)
T KOG1443|consen  263 LLSRTSSLTLSIAGIVKEVCTLLLAIIILKDQLSLLNWLGLAICLAGILLHRNEPQ  318 (349)
T ss_pred             eeeeccceeeeHHHHHHHHHHHHHHHHHhhcchhhhHHHHHHHHHHHHHHhccCcc
Confidence            322        222233468999999999999999999999999999999955433

>KOG1442 consensus GDP-fucose transporter [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]

Probab=98.53  E-value=4.5e-08  Score=83.98  Aligned_cols=185  Identities=16%  Similarity=0.212  Sum_probs=133.7

Q ss_pred             HHHHHHHHHhcCCCCHHHHHHHHHHHHHHhhhcccCCCccccCcccccchhHHHHHHHHHHHHHHHHHHHHHHhhcCCch
Q 026565           13 FSLKFSRLFLRRRLSTLQWMAIVLLAVGTTTSQVKGCGEALCDSLFAAPIQGYLLGVLSACLSALAGVYTEFLMKKNNDS   92 (237)
Q Consensus        13 ~tall~~~~L~~~ls~~qw~al~ll~~Gv~l~~~~~~~~~~~~~~~~~~~~G~~~~l~~a~~sa~a~vy~E~~~K~~~~~   92 (237)
                      ||.++.+++||+|=+..-..+..+++.|--+=.-++.      ....-...|.++.+.+++.-|+-++|.+|.+-.-++.
T Consensus       141 FtVlLtyvllkqkTs~~~~~~C~lIi~GF~lGvdqE~------~~~~ls~~GvifGVlaSl~vAlnaiytkk~l~~v~~~  214 (347)
T KOG1442|consen  141 FTVLLTYVLLKQKTSFFALGCCLLIILGFGLGVDQEG------STGTLSWIGVIFGVLASLAVALNAIYTKKVLPPVGDC  214 (347)
T ss_pred             HHHHhHHhhcccccccccceeehhheehheecccccc------ccCccchhhhHHHHHHHHHHHHHHHhhheecccccCe
Confidence            8999999999999998887776666666543321111      1123456899999999999999999999887766777


Q ss_pred             hHHHHHHHHHHHHHHHHHHHHh-hccccccccCccccccccccchHHHHHHHHHHHhhhhhhhh----hhhhhHHHHHHH
Q 026565           93 LYWQNVQLYTFGAIFNMFRLLL-DDFRGGFEKGPWWQRLFDGYNITTWMVVFNLGSTGLLVSWL----MKYADNIIKVYS  167 (237)
Q Consensus        93 ~~~~n~~L~~~~~~~~~~~~~~-~~~~~~~~~g~~~~~~~~g~~~~~~~~il~~a~~Gl~va~v----lk~~d~i~k~~a  167 (237)
                      +|.-.+..-.++++..+....+ .|.+.+.       ++-+-++...|.+.....+.|..+.++    +|..+.++.+..
T Consensus       215 iw~lt~ynnv~a~lLflpll~lnge~~~v~-------~~~~l~a~~Fw~~mtLsglfgF~mgyvTg~QIK~TSplThnIS  287 (347)
T KOG1442|consen  215 IWRLTAYNNVNALLLFLPLLILNGEFQAVV-------GFPHLPAIKFWILMTLSGLFGFAMGYVTGWQIKVTSPLTHNIS  287 (347)
T ss_pred             ehhhHHHHHHHHHHHHHHHHHHcchHHHHc-------CcccchHHHHHHHHHHHHHHHHHhhheeeEEEEecccceeeec
Confidence            8866665556666666554433 3444332       233445666676666655555555444    366677777777


Q ss_pred             HHHHHHHHHHHHHHHcCCCccHHHHHHHHHHHHHhHhccCCCC
Q 026565          168 TSMAMLLTMVLSVYLFNFKPTLQLFLGIIICMMSLHMYFAPPG  210 (237)
Q Consensus       168 ~s~siv~s~lls~~~f~~~~t~~~~vG~~lV~~s~~lY~~~~~  210 (237)
                      .+..-..-.++++.+.+|..+..-+-|-.+|+.|...|++-.+
T Consensus       288 gTAka~aQTvlAv~~y~E~ks~lwwtsn~~vLvgs~~YT~vk~  330 (347)
T KOG1442|consen  288 GTAKAAAQTVLAVAYYSETKSGLWWTSNIVVLVGSLAYTLVKE  330 (347)
T ss_pred             HhHHHHHHHHHHHHHHHHHhhhheeeeeEEEEehhHHHHHHHH
Confidence            7777788888999999999999999999999999999988543

>KOG1444 consensus Nucleotide-sugar transporter VRG4/SQV-7 [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]

Probab=98.45  E-value=4.3e-06  Score=73.35  Aligned_cols=193  Identities=12%  Similarity=0.140  Sum_probs=121.3

Q ss_pred             cccCCChhHH---------HHHHHHHHHhcCCCCHHHHHHHHHHHHHHhhhcccCCCccccCcccccchhHHHHHHHHHH
Q 026565            3 AISMITRPFH---------FSLKFSRLFLRRRLSTLQWMAIVLLAVGTTTSQVKGCGEALCDSLFAAPIQGYLLGVLSAC   73 (237)
Q Consensus         3 ~~~~i~~p~~---------~tall~~~~L~~~ls~~qw~al~ll~~Gv~l~~~~~~~~~~~~~~~~~~~~G~~~~l~~a~   73 (237)
                      ..--+.+|++         .|++....++|+|.+..-|.++.+..+|......++..         ....|+.+++..++
T Consensus        97 slk~lnVpm~tv~kn~tii~~ai~E~lf~~~~~~~~v~~Sv~~m~~~s~~~~~~d~s---------f~~~gY~w~~~n~~  167 (314)
T KOG1444|consen   97 SLKYLNVPMFTVFKNLTIILTAIGEVLFFGKRPSNKVWASVFAMIIGSVAAAFTDLS---------FNLRGYSWALANCL  167 (314)
T ss_pred             cccccCchHHHHHhhchHHHHHHhHHhhcCcCchhhHHHHHHHHHHHHHhhccccce---------ecchhHHHHHHHHH
Confidence            3444566666         89999999999999999999999999998887766542         23459999999999


Q ss_pred             HHHHHHHHHHHHhhcCCchhHHHHHHHH--HHHHHHHHHHH-HhhccccccccCccccccccccchHHHHHHHHHHHhhh
Q 026565           74 LSALAGVYTEFLMKKNNDSLYWQNVQLY--TFGAIFNMFRL-LLDDFRGGFEKGPWWQRLFDGYNITTWMVVFNLGSTGL  150 (237)
Q Consensus        74 ~sa~a~vy~E~~~K~~~~~~~~~n~~L~--~~~~~~~~~~~-~~~~~~~~~~~g~~~~~~~~g~~~~~~~~il~~a~~Gl  150 (237)
                      +.+.-.+|.++..+..+.+.|  .+.+|  +++++...+.. ..+|+.....+.      -.-.....+..+....+.|.
T Consensus       168 ~~a~~~v~~kk~vd~~~l~~~--~lv~yNnl~~L~~l~~~~~~~ge~~~l~~~~------~~~~~~~~~~~~~lScv~gf  239 (314)
T KOG1444|consen  168 TTAAFVVYVKKSVDSANLNKF--GLVFYNNLLSLPPLLILSFITGELDALSLNF------DNWSDSSVLVVMLLSCVMGF  239 (314)
T ss_pred             HHHHHHHHHHHhhccccccce--eEEeehhHHHHHHHHHHHHHhcchHHHHhhc------ccccchhHHHHHHHHHHHHH
Confidence            999999999998877653212  11111  33444444433 334444111111      00112334444444444454


Q ss_pred             hhhhhh----hhhhHHHHHHHHHHHHHHHHHHHHHHcCCCccHHHHHHHHHHHHHhHhccCCCCCC
Q 026565          151 LVSWLM----KYADNIIKVYSTSMAMLLTMVLSVYLFNFKPTLQLFLGIIICMMSLHMYFAPPGML  212 (237)
Q Consensus       151 ~va~vl----k~~d~i~k~~a~s~siv~s~lls~~~f~~~~t~~~~vG~~lV~~s~~lY~~~~~~~  212 (237)
                      .++++.    ++-++..-...-..-...+.+...+++|.+.++.-++|..+-+.|..+|+....++
T Consensus       240 ~isy~s~~ct~~~SAtT~tivG~~n~l~t~l~~ll~~d~~~~~~n~~gll~~~~ggv~Y~~~~~~~  305 (314)
T KOG1444|consen  240 GISYTSFLCTRVNSATTTTIVGAKNKLLTYLGGLLFGDKPFTFLNVIGLLVGFFGGVLYSYATFRK  305 (314)
T ss_pred             HHHHHHHHHHhhccccceeehhhhhhHHHHHHHHhcCCceechhhhHHHHHHhhhhhHHhhhhhhh
Confidence            444333    22222211111122234555666667799999999999999999999998876543

>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long

Probab=97.98  E-value=0.0002  Score=62.18  Aligned_cols=173  Identities=16%  Similarity=0.236  Sum_probs=96.4

Q ss_pred             HHHHHHHHHhcCCCCHHHHH----HHHHHHHHHhhhcccCCCccccCcccccchhHHHHHHHHHHHHHHHHHHHHHHhhc
Q 026565           13 FSLKFSRLFLRRRLSTLQWM----AIVLLAVGTTTSQVKGCGEALCDSLFAAPIQGYLLGVLSACLSALAGVYTEFLMKK   88 (237)
Q Consensus        13 ~tall~~~~L~~~ls~~qw~----al~ll~~Gv~l~~~~~~~~~~~~~~~~~~~~G~~~~l~~a~~sa~a~vy~E~~~K~   88 (237)
                      .+++++.++++|--+..||.    |++++.+|+.+...++.+++..+ ..++...|+..++++++.+-.-.+..+ ..+-
T Consensus        85 g~sl~gv~~fgEW~~~~~~~~G~~Al~liiiGv~lts~~~~~~~~~~-~~~~~~kgi~~Ll~stigy~~Y~~~~~-~~~~  162 (269)
T PF06800_consen   85 GTSLIGVLFFGEWTTTTQKIIGFLALVLIIIGVILTSYQDKKSDKSS-SKSNMKKGILALLISTIGYWIYSVIPK-AFHV  162 (269)
T ss_pred             HHHHHHHhhcCCCCCcchHHHHHHHHHHHHHHHHHhccccccccccc-cccchhhHHHHHHHHHHHHHHHHHHHH-hcCC
Confidence            79999999999999988876    89999999999988775543211 123455688888888887655555433 3322


Q ss_pred             CCc-hhHHHHHHHHHHHHHHHHHHHHhhccccccccCccccccccccchH--HHHHHHHHHHhhhhhhhhhhhhhHHHHH
Q 026565           89 NND-SLYWQNVQLYTFGAIFNMFRLLLDDFRGGFEKGPWWQRLFDGYNIT--TWMVVFNLGSTGLLVSWLMKYADNIIKV  165 (237)
Q Consensus        89 ~~~-~~~~~n~~L~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~--~~~~il~~a~~Gl~va~vlk~~d~i~k~  165 (237)
                      ++. -+..|.+=+.+.+++++...     .+...++ ..+.+...|.-+.  .+..++...-.|..+++           
T Consensus       163 ~~~~~~lPqaiGm~i~a~i~~~~~-----~~~~~~k-~~~~nil~G~~w~ignl~~~is~~~~G~a~af-----------  225 (269)
T PF06800_consen  163 SGWSAFLPQAIGMLIGAFIFNLFS-----KKPFFEK-KSWKNILTGLIWGIGNLFYLISAQKNGVATAF-----------  225 (269)
T ss_pred             ChhHhHHHHHHHHHHHHHHHhhcc-----ccccccc-chHHhhHHHHHHHHHHHHHHHhHHhccchhhh-----------
Confidence            221 13334333333333333322     1111111 1111223332111  11111111111222222           


Q ss_pred             HHHHHHHHHHHHHHHHHcCCCccHH----HHHHHHHHHHHhHh
Q 026565          166 YSTSMAMLLTMVLSVYLFNFKPTLQ----LFLGIIICMMSLHM  204 (237)
Q Consensus       166 ~a~s~siv~s~lls~~~f~~~~t~~----~~vG~~lV~~s~~l  204 (237)
                      .-+.++++++.+-++++|+|+=+..    .++|.+++++|..+
T Consensus       226 ~lSQ~~vvIStlgGI~il~E~Kt~ke~~~~~~G~~Liv~G~il  268 (269)
T PF06800_consen  226 TLSQLGVVISTLGGIFILKEKKTKKEMIYTLIGLILIVIGAIL  268 (269)
T ss_pred             hHHhHHHHHHHhhhheEEEecCchhhHHHHHHHHHHHHHhhhc
Confidence            1233668899999999999987644    67888888877653

Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane

>COG2510 Predicted membrane protein [Function unknown]

Probab=97.94  E-value=7.3e-05  Score=57.50  Aligned_cols=125  Identities=16%  Similarity=0.331  Sum_probs=71.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhcCCch--hHHHHHHHHHHHHHHHHHHHHh-hccccccccCccccccccccchHHHHH
Q 026565           65 YLLGVLSACLSALAGVYTEFLMKKNNDS--LYWQNVQLYTFGAIFNMFRLLL-DDFRGGFEKGPWWQRLFDGYNITTWMV  141 (237)
Q Consensus        65 ~~~~l~~a~~sa~a~vy~E~~~K~~~~~--~~~~n~~L~~~~~~~~~~~~~~-~~~~~~~~~g~~~~~~~~g~~~~~~~~  141 (237)
                      ...+++++++.++..++-+--+|+.|.+  ..+|++....+    .....+. ..++...        -....++  .++
T Consensus         5 ~~~ALLsA~fa~L~~iF~KIGl~~vdp~~At~IRtiVi~~~----l~~v~~~~g~~~~~~--------~~~~k~~--lfl   70 (140)
T COG2510           5 IIYALLSALFAGLTPIFAKIGLEGVDPDFATTIRTIVILIF----LLIVLLVTGNWQAGG--------EIGPKSW--LFL   70 (140)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhccccCccHHHHHHHHHHHHH----HHHHHHhcCceeccc--------ccCccee--hhh
Confidence            3578899999999999855556655433  33444444322    1111111 1222110        1111221  122


Q ss_pred             HHHHHHhhhhhhhhhhhhhHHHHHH------HHHHHHHHHHHHHHHHcCCCccHHHHHHHHHHHHHhHhcc
Q 026565          142 VFNLGSTGLLVSWLMKYADNIIKVY------STSMAMLLTMVLSVYLFNFKPTLQLFLGIIICMMSLHMYF  206 (237)
Q Consensus       142 il~~a~~Gl~va~vlk~~d~i~k~~------a~s~siv~s~lls~~~f~~~~t~~~~vG~~lV~~s~~lY~  206 (237)
                      ++....+|+  +. +-|.-++.++-      -...++++.+++|+++++|++|...++|..++.+|..+-+
T Consensus        71 ilSGla~gl--sw-l~Yf~ALk~G~as~VvPldk~svvl~~lls~lfL~E~ls~~~~iG~~LI~~Gailvs  138 (140)
T COG2510          71 ILSGLAGGL--SW-LLYFRALKKGKASRVVPLDKTSVVLAVLLSILFLGERLSLPTWIGIVLIVIGAILVS  138 (140)
T ss_pred             hHHHHHHHH--HH-HHHHHHHhcCCcceEEEcccccHHHHHHHHHHHhcCCCCHHHHHHHHHHHhCeeeEe
Confidence            233223333  22 22222344443      4457789999999999999999999999999999987654

>KOG4314 consensus Predicted carbohydrate/phosphate translocator [General function prediction only]

Probab=97.93  E-value=0.0001  Score=60.99  Aligned_cols=179  Identities=14%  Similarity=0.207  Sum_probs=109.4

Q ss_pred             HHHHHHHHHhcCCCCHHHHHHHHHHHHHHhhhcccCCCccccCcccccchhHHHHHHHHHHHHHHHHHHHHHHhhcCC--
Q 026565           13 FSLKFSRLFLRRRLSTLQWMAIVLLAVGTTTSQVKGCGEALCDSLFAAPIQGYLLGVLSACLSALAGVYTEFLMKKNN--   90 (237)
Q Consensus        13 ~tall~~~~L~~~ls~~qw~al~ll~~Gv~l~~~~~~~~~~~~~~~~~~~~G~~~~l~~a~~sa~a~vy~E~~~K~~~--   90 (237)
                      |+-+++++.||.|+...+.++.++...|+++..+.+..       ..+.+.|+.+++.+++.+++--|.+++....-+  
T Consensus        92 FVfiLa~IVL~D~~~~~kIlaailAI~GiVmiay~DN~-------~a~e~iGi~~AV~SA~~aAlYKV~FK~~iGnAn~G  164 (290)
T KOG4314|consen   92 FVFILAIIVLGDRFMGFKILAAILAIGGIVMIAYADNE-------HADEIIGIACAVGSAFMAALYKVLFKMFIGNANFG  164 (290)
T ss_pred             HHHHHHHHHhccchhhhhHHHHHHHhCcEEEEEeccch-------hhhhhhhHHHHHHHHHHHHHHHHHHHHHhccCcch
Confidence            78889999999999999999999999999998865542       245789999999999998888887777765432  


Q ss_pred             -chhHHHHHHHHHHHHHHHHHHH---HhhccccccccCccccccccccchHHHHHHHHHHHhhhhhhhhhh----hhhHH
Q 026565           91 -DSLYWQNVQLYTFGAIFNMFRL---LLDDFRGGFEKGPWWQRLFDGYNITTWMVVFNLGSTGLLVSWLMK----YADNI  162 (237)
Q Consensus        91 -~~~~~~n~~L~~~~~~~~~~~~---~~~~~~~~~~~g~~~~~~~~g~~~~~~~~il~~a~~Gl~va~vlk----~~d~i  162 (237)
                       .+.++..+  .++-+++..+..   .....++           ++.|....|.-....+.-.+..-+.++    ....+
T Consensus       165 daa~FmS~L--GF~NL~~~~~~~lIL~~T~VE~-----------~qsFA~~PWG~l~G~A~L~lAFN~~iN~GiaL~~Pi  231 (290)
T KOG4314|consen  165 DAAHFMSCL--GFFNLCFISFPALILAFTGVEH-----------LQSFAAAPWGCLCGAAGLSLAFNFLINFGIALLNPI  231 (290)
T ss_pred             hHHHHHHHH--HHHHHHHHhhhHHHHHHhchHH-----------HHHHhhCCchhhhhHHHHHHHHhhheeehhhhhchh
Confidence             12222221  122222222211   1111111           111111112211111110111111111    12345


Q ss_pred             HHHHHHHHHHHHHHHHHHHHcCCCccHHHHHHHHHHHHHhHhccCCCCC
Q 026565          163 IKVYSTSMAMLLTMVLSVYLFNFKPTLQLFLGIIICMMSLHMYFAPPGM  211 (237)
Q Consensus       163 ~k~~a~s~siv~s~lls~~~f~~~~t~~~~vG~~lV~~s~~lY~~~~~~  211 (237)
                      +-+...-+++.....+..++-+-..+..++.|.+++.+|-.+--.|..+
T Consensus       232 lISiG~l~~iP~NaaiDiL~q~l~~ntl~La~T~iI~i~FiLiiiP~d~  280 (290)
T KOG4314|consen  232 LISIGMLCGIPGNAAIDILFQELEFNTLFLAATCIICIGFILIIIPEDK  280 (290)
T ss_pred             hheehheecCcchhHHHHHHHHHHHHHHHHHHHHHHHHhHHheecccch
Confidence            5555666667778888888888889999999999999998776655443

>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown

Probab=97.93  E-value=0.00018  Score=53.82  Aligned_cols=60  Identities=17%  Similarity=0.329  Sum_probs=51.5

Q ss_pred             HHhhhhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHcCCCccHHHHHHHHHHHHHhHhc
Q 026565          146 GSTGLLVSWLMKYADNIIKVYSTSMAMLLTMVLSVYLFNFKPTLQLFLGIIICMMSLHMY  205 (237)
Q Consensus       146 a~~Gl~va~vlk~~d~i~k~~a~s~siv~s~lls~~~f~~~~t~~~~vG~~lV~~s~~lY  205 (237)
                      +++..+....+|+.+...-+....+.++++.++++++++|++++..++|..+++.|+++.
T Consensus        65 ~~~~~~~~~a~~~~~~~~~~~~~~~~pv~~~i~~~~~~~e~~~~~~~~g~~l~~~g~~l~  124 (126)
T PF00892_consen   65 ALAYLLYFYALKYISASIVSILQYLSPVFAAILGWLFLGERPSWRQIIGIILIIIGVVLI  124 (126)
T ss_pred             ehHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHH
Confidence            444455556678888888888888999999999999999999999999999999998764

Many members of this family are classed as drug/metabolite transporters and have no known function. They are predicted to be integral membrane proteins and many of the proteins contain two copies of this domain [].; GO: 0016020 membrane

>PRK02971 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional

Probab=97.87  E-value=0.0012  Score=51.22  Aligned_cols=120  Identities=18%  Similarity=0.189  Sum_probs=72.9

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHhhcCCc-hhHHHHHHHHHHHHHHHHHHHHhhccccccccCccccccccccch--HHH
Q 026565           63 QGYLLGVLSACLSALAGVYTEFLMKKNND-SLYWQNVQLYTFGAIFNMFRLLLDDFRGGFEKGPWWQRLFDGYNI--TTW  139 (237)
Q Consensus        63 ~G~~~~l~~a~~sa~a~vy~E~~~K~~~~-~~~~~n~~L~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~--~~~  139 (237)
                      .|+++.+.+.++.+.+.+..++-.++.+. +.....  +.   ..   . ..                    .++  +.+
T Consensus         2 ~~~~~i~~sv~l~~~gQl~~K~g~~~~g~~~~~~~~--~~---~~---~-~~--------------------~~p~~~i~   52 (129)
T PRK02971          2 MGYLWGLASVLLASVAQLSLKWGMSRLPLLSHAWDF--IA---AL---L-AF--------------------GLALRAVL   52 (129)
T ss_pred             ccHHHHHHHHHHHHHHHHHHHHHHhhCCCccchhHH--HH---HH---H-HH--------------------hccHHHHH
Confidence            36778888888888888887777665432 110000  00   00   0 00                    011  233


Q ss_pred             HHHHHHHHhhhhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHH--HcCCCccHHHHHHHHHHHHHhHhccCCCCC
Q 026565          140 MVVFNLGSTGLLVSWLMKYADNIIKVYSTSMAMLLTMVLSVY--LFNFKPTLQLFLGIIICMMSLHMYFAPPGM  211 (237)
Q Consensus       140 ~~il~~a~~Gl~va~vlk~~d~i~k~~a~s~siv~s~lls~~--~f~~~~t~~~~vG~~lV~~s~~lY~~~~~~  211 (237)
                      .-+...++.-.+-...+|+.|-.......+...+...++++.  +|||++|+..++|.++++.|+++-+.+.+|
T Consensus        53 lgl~~~~la~~~w~~aL~~~~ls~Ayp~~sl~~~~v~~~~~~~~~~~E~ls~~~~iGi~lIi~GV~lv~~~~~~  126 (129)
T PRK02971         53 LGLAGYALSMLCWLKALRYLPLSRAYPLLSLSYALVYLAAMLLPWFNETFSLKKTLGVACIMLGVWLINLPTTK  126 (129)
T ss_pred             HHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhccCCCC
Confidence            333333333344455667666655555555555666667764  899999999999999999999998765443

>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein

Probab=97.64  E-value=0.0015  Score=56.90  Aligned_cols=133  Identities=15%  Similarity=0.002  Sum_probs=76.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHHHHhhccccccccCccccccccccchHHHHHHHH
Q 026565           65 YLLGVLSACLSALAGVYTEFLMKKNNDSLYWQNVQLYTFGAIFNMFRLLLDDFRGGFEKGPWWQRLFDGYNITTWMVVFN  144 (237)
Q Consensus        65 ~~~~l~~a~~sa~a~vy~E~~~K~~~~~~~~~n~~L~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~il~  144 (237)
                      +.+.+.++++.+...+..+|..+++..   .+ ...+..+.+...........+...+.      .-..+-.........
T Consensus         3 ~~~~~~aa~~~a~~~~~~k~~~~~~~~---~~-~~~~~~~~~~l~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~   72 (281)
T TIGR03340         3 LTLVVFSALMHAGWNLMAKSHADKEPD---FL-WWALLAHSVLLTPYGLWYLAQVGWSR------LPATFWLLLAISAVA   72 (281)
T ss_pred             HHHHHHHHHHHHHHHHHHhhcCCchhH---HH-HHHHHHHHHHHHHHHHHhcccCCCCC------cchhhHHHHHHHHHH
Confidence            457788999999999998877766432   11 11112222222221111100000000      000000011111122


Q ss_pred             HHHhhhhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHcCCCccHHHHHHHHHHHHHhHhccC
Q 026565          145 LGSTGLLVSWLMKYADNIIKVYSTSMAMLLTMVLSVYLFNFKPTLQLFLGIIICMMSLHMYFA  207 (237)
Q Consensus       145 ~a~~Gl~va~vlk~~d~i~k~~a~s~siv~s~lls~~~f~~~~t~~~~vG~~lV~~s~~lY~~  207 (237)
                      ++....+....+++.+.-.-+......++++.++++++|+|+++...++|..+++.|+++-..
T Consensus        73 ~~~~~~~~~~a~~~~~~~~~~~l~~~~p~~~~l~~~~~~~e~~~~~~~~g~~~~~~Gv~ll~~  135 (281)
T TIGR03340        73 NMVYFLGLAQAYHHADVGLVYPLARSSPLLVAIWATLTLGETLSPLAWLGILIITLGLLVLGL  135 (281)
T ss_pred             HHHHHHHHHHHHhcCChhhhhhHHhhhHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhc
Confidence            222333334446777777777777888999999999999999999999999999999876543

This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.

>COG5070 VRG4 Nucleotide-sugar transporter [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]

Probab=97.49  E-value=0.0016  Score=54.94  Aligned_cols=188  Identities=14%  Similarity=0.183  Sum_probs=114.0

Q ss_pred             HHHHHHHHHhcCCCCHHHHHHHHHHHHHHhhhcccCCCccccCcccccchhHHHHHHHHHHHHHHHHHHHHHHhhcCCch
Q 026565           13 FSLKFSRLFLRRRLSTLQWMAIVLLAVGTTTSQVKGCGEALCDSLFAAPIQGYLLGVLSACLSALAGVYTEFLMKKNNDS   92 (237)
Q Consensus        13 ~tall~~~~L~~~ls~~qw~al~ll~~Gv~l~~~~~~~~~~~~~~~~~~~~G~~~~l~~a~~sa~a~vy~E~~~K~~~~~   92 (237)
                      ..|.....++|+|.+.....+.++++.......++|.+...-.  .+....|++++..-++.++.--...+|..|-.+..
T Consensus       107 ~iAygEvl~Fgg~vtsl~l~SFilMvlSS~va~w~D~q~~~~~--~~~lN~GY~Wm~~NclssaafVL~mrkri~ltNf~  184 (309)
T COG5070         107 LIAYGEVLFFGGRVTSLELLSFILMVLSSVVATWGDQQASAFK--AQILNPGYLWMFTNCLSSAAFVLIMRKRIKLTNFK  184 (309)
T ss_pred             hhHhhHHHHhcCccchhhHHHHHHHHHHHHHhccchhhHHHHH--hcccCCceEEEehhhHhHHHHHHHHHHhhcccccc
Confidence            6778889999999999999999999999888887775432111  12334588888777777655444444444322211


Q ss_pred             hHHHHHHHH-HHHHHHHHHH-HHhhccccccccCccccccccccchHH--HHHHHHHHHhh--hhhhhhhhhhhHHHHHH
Q 026565           93 LYWQNVQLY-TFGAIFNMFR-LLLDDFRGGFEKGPWWQRLFDGYNITT--WMVVFNLGSTG--LLVSWLMKYADNIIKVY  166 (237)
Q Consensus        93 ~~~~n~~L~-~~~~~~~~~~-~~~~~~~~~~~~g~~~~~~~~g~~~~~--~~~il~~a~~G--l~va~vlk~~d~i~k~~  166 (237)
                      - .+.+++. ..++++.+.. .+.+||...        +.-.++++-.  |..|-.....|  -+.++++|..++-.-+.
T Consensus       185 d-~dtmfYnNllslPiL~~~s~~~edws~~--------n~annl~~d~l~am~ISgl~svgiSy~saWcvrVtSSTtySM  255 (309)
T COG5070         185 D-FDTMFYNNLLSLPILLSFSFLFEDWSPG--------NLANNLSVDSLMAMFISGLCSVGISYCSAWCVRVTSSTTYSM  255 (309)
T ss_pred             h-hhHHHHhhhHHHHHHHHHHHHhccCCcc--------hhhcCCChHHHHHHHHHHHHHhhhhhccceeEeehhhhHHHH
Confidence            0 1233332 4555555543 345666532        2344454433  44332222222  33445555444433333


Q ss_pred             HHHHHHHHHHHHHHHHcCCCccHHHHHHHHHHHHHhHhccCCCCC
Q 026565          167 STSMAMLLTMVLSVYLFNFKPTLQLFLGIIICMMSLHMYFAPPGM  211 (237)
Q Consensus       167 a~s~siv~s~lls~~~f~~~~t~~~~vG~~lV~~s~~lY~~~~~~  211 (237)
                      .-++.=....+.+.++||+|.+...+....+-+.+..+|..+..+
T Consensus       256 vGALNKlp~alaGlvffdap~nf~si~sillGflsg~iYavaks~  300 (309)
T COG5070         256 VGALNKLPIALAGLVFFDAPVNFLSIFSILLGFLSGAIYAVAKSK  300 (309)
T ss_pred             HHHhhhChHHHhhhhhcCCchhHHHHHHHHHHHHHHHHHHHHHHH
Confidence            333333456778889999999999999999999888888776443

>PF13536 EmrE: Multidrug resistance efflux transporter

Probab=97.45  E-value=0.00024  Score=53.53  Aligned_cols=41  Identities=32%  Similarity=0.604  Sum_probs=37.1

Q ss_pred             hhHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhhhcccCCC
Q 026565            9 RPFHFSLKFSRLFLRRRLSTLQWMAIVLLAVGTTTSQVKGCG   50 (237)
Q Consensus         9 ~p~~~tall~~~~L~~~ls~~qw~al~ll~~Gv~l~~~~~~~   50 (237)
                      .|+ ++++++++++|||+++++|.++++.++|++++..++.+
T Consensus        70 ~pi-~~~ll~~~~~~er~~~~~~~a~~l~~~Gv~li~~~~~~  110 (113)
T PF13536_consen   70 SPI-FTALLSWLFFKERLSPRRWLAILLILIGVILIAWSDLT  110 (113)
T ss_pred             HHH-HHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhhhhcc
Confidence            455 99999999999999999999999999999999877653

>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function

Probab=97.12  E-value=0.0089  Score=52.99  Aligned_cols=117  Identities=13%  Similarity=0.065  Sum_probs=78.5

Q ss_pred             ccchhHHHHHHHHHHHHHHHHHHHHHHhhcCCc-hhHH-HHHHHHHHHHHHHHHHHHhhccccccccCccccccccccch
Q 026565           59 AAPIQGYLLGVLSACLSALAGVYTEFLMKKNND-SLYW-QNVQLYTFGAIFNMFRLLLDDFRGGFEKGPWWQRLFDGYNI  136 (237)
Q Consensus        59 ~~~~~G~~~~l~~a~~sa~a~vy~E~~~K~~~~-~~~~-~n~~L~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~  136 (237)
                      ++...|+.++++++++.+.+-.+++|..++.+. +... ++..-                             .+.. ..
T Consensus         3 ~~~~iGv~lav~ss~~~~~g~~lqk~~~~r~~~~~~~~~~~~~~-----------------------------~l~~-~~   52 (300)
T PF05653_consen    3 TDFYIGVLLAVVSSIFIAVGFNLQKKSHLRLPRGSLRAGSGGRS-----------------------------YLRR-PL   52 (300)
T ss_pred             chhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccchhhH-----------------------------HHhh-HH
Confidence            456889999999999999999999988766532 1110 00000                             0000 11


Q ss_pred             HHHHHHHHHHHhhhhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHcCCCccHHHHHHHHHHHHHhHhcc
Q 026565          137 TTWMVVFNLGSTGLLVSWLMKYADNIIKVYSTSMAMLLTMVLSVYLFNFKPTLQLFLGIIICMMSLHMYF  206 (237)
Q Consensus       137 ~~~~~il~~a~~Gl~va~vlk~~d~i~k~~a~s~siv~s~lls~~~f~~~~t~~~~vG~~lV~~s~~lY~  206 (237)
                      |...++ ..+++.+.--..+.++...+-+.-.+++++++.+++.++++|+++...++|.++++.|+.+--
T Consensus        53 W~~G~~-~~~~g~~~~~~Al~~ap~slv~Plg~~~lv~~~~~a~~~l~e~~~~~~~~G~~l~i~G~~liv  121 (300)
T PF05653_consen   53 WWIGLL-LMVLGEILNFVALGFAPASLVAPLGALSLVFNAVLARFFLGEKLTRRDIVGCALIILGSVLIV  121 (300)
T ss_pred             HHHHHH-HHhcchHHHHHHHHhhhHHHHHHHHhhhhhhHHHHhHHHhcccchHhHHhhHHHHHhhheeeE
Confidence            222222 223333333344566667777777788999999999999999999999999999998886543

>PRK15051 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional

Probab=97.11  E-value=0.005  Score=46.47  Aligned_cols=58  Identities=10%  Similarity=0.096  Sum_probs=46.6

Q ss_pred             hhhhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHcCCCccHHHHHHHHHHHHHhHhc
Q 026565          148 TGLLVSWLMKYADNIIKVYSTSMAMLLTMVLSVYLFNFKPTLQLFLGIIICMMSLHMY  205 (237)
Q Consensus       148 ~Gl~va~vlk~~d~i~k~~a~s~siv~s~lls~~~f~~~~t~~~~vG~~lV~~s~~lY  205 (237)
                      ...+.+.++|+.+--......+++.+++.++++++|||++|+..++|.++++.|+.+-
T Consensus        50 ~~~~~~~al~~iplg~Ay~~~~l~~v~~~~~~~l~f~E~ls~~~~~Gi~lii~Gv~~i  107 (111)
T PRK15051         50 AMVLWLLVLQNVPVGIAYPMLSLNFVWVTLAAVKLWHEPVSPRHWCGVAFIIGGIVIL  107 (111)
T ss_pred             HHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHH
Confidence            3445566677765555555556889999999999999999999999999999998754

>PRK15430 putative chloramphenical resistance permease RarD; Provisional

Probab=97.09  E-value=0.031  Score=49.07  Aligned_cols=137  Identities=12%  Similarity=0.146  Sum_probs=80.1

Q ss_pred             cchhHHHHHHHHHHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHHHHhh-ccccccccCccccccccccchHH
Q 026565           60 APIQGYLLGVLSACLSALAGVYTEFLMKKNNDSLYWQNVQLYTFGAIFNMFRLLLD-DFRGGFEKGPWWQRLFDGYNITT  138 (237)
Q Consensus        60 ~~~~G~~~~l~~a~~sa~a~vy~E~~~K~~~~~~~~~n~~L~~~~~~~~~~~~~~~-~~~~~~~~g~~~~~~~~g~~~~~  138 (237)
                      +...|+.+++++++++|..+++.+. ..+.+ +...-..+. .++.++........ +.+...+       .+.......
T Consensus         5 ~~~~g~~~~l~a~~~wg~~~~~~k~-~~~~~-~~~~~~~R~-~~a~~~l~~~~~~~~~~~~~~~-------~~~~~~~~~   74 (296)
T PRK15430          5 QTRQGVLLALAAYFIWGIAPAYFKL-IYYVP-ADEILTHRV-IWSFFFMVVLMSICRQWSYLKT-------LIQTPQKIF   74 (296)
T ss_pred             hhhhHHHHHHHHHHHHHHHHHHHHH-hcCCC-HHHHHHHHH-HHHHHHHHHHHHHHccHHHHHH-------HHcCHHHHH
Confidence            3567999999999999999999854 43322 222112222 22332222222221 1111000       001111111


Q ss_pred             H--HHHHHHHHhhhhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHcCCCccHHHHHHHHHHHHHhHhcc
Q 026565          139 W--MVVFNLGSTGLLVSWLMKYADNIIKVYSTSMAMLLTMVLSVYLFNFKPTLQLFLGIIICMMSLHMYF  206 (237)
Q Consensus       139 ~--~~il~~a~~Gl~va~vlk~~d~i~k~~a~s~siv~s~lls~~~f~~~~t~~~~vG~~lV~~s~~lY~  206 (237)
                      +  .-.+..+....+.-.-++|.+....+....+.++++.++++++++|+++...++|..+.+.|+.+-.
T Consensus        75 ~~~~~~~~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~v~l~~~~~l~E~~~~~~~~g~~l~~~Gv~li~  144 (296)
T PRK15430         75 MLAVSAVLIGGNWLLFIWAVNNHHMLEASLGYFINPLVNIVLGMIFLGERFRRMQWLAVILAICGVLVQL  144 (296)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHH
Confidence            1  1112222223333344577777777788888999999999999999999999999999999988654

>PRK10452 multidrug efflux system protein MdtJ; Provisional

Probab=97.07  E-value=0.0081  Score=46.05  Aligned_cols=64  Identities=14%  Similarity=0.223  Sum_probs=47.7

Q ss_pred             HHhhhhhhhhhhhhh-HHHHHHHHHHHHHHHHHHHHHHcCCCccHHHHHHHHHHHHHhHhccCCC
Q 026565          146 GSTGLLVSWLMKYAD-NIIKVYSTSMAMLLTMVLSVYLFNFKPTLQLFLGIIICMMSLHMYFAPP  209 (237)
Q Consensus       146 a~~Gl~va~vlk~~d-~i~k~~a~s~siv~s~lls~~~f~~~~t~~~~vG~~lV~~s~~lY~~~~  209 (237)
                      ++.-.+.+..+|+.+ ++.-+.-+.+.++.+.++++++|||++|+..++|..+++.|+..-+...
T Consensus        41 ~~sf~~ls~al~~lplsiAYavw~GiG~v~~~~ig~~~f~E~~s~~~~~gi~lIi~GVi~l~l~~  105 (120)
T PRK10452         41 SLSYIFLSFAVKKIALGVAYALWEGIGILFITLFSVLLFDESLSLMKIAGLTTLVAGIVLIKSGT  105 (120)
T ss_pred             HHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhhcCC
Confidence            333444566666653 2223334467889999999999999999999999999999998776544

>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []

Probab=96.96  E-value=0.051  Score=47.89  Aligned_cols=68  Identities=12%  Similarity=0.203  Sum_probs=57.0

Q ss_pred             HHHHhhhhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHcCCCccHHHHHHHHHHHHHhHhccCCCCC
Q 026565          144 NLGSTGLLVSWLMKYADNIIKVYSTSMAMLLTMVLSVYLFNFKPTLQLFLGIIICMMSLHMYFAPPGM  211 (237)
Q Consensus       144 ~~a~~Gl~va~vlk~~d~i~k~~a~s~siv~s~lls~~~f~~~~t~~~~vG~~lV~~s~~lY~~~~~~  211 (237)
                      .+.+...+--..++|.+--+....-+.+++.+.++++++++++.+...+++.+++.+|+.+++....+
T Consensus        73 ~~~~~~~~~~~al~~i~~p~~~~~ks~~~i~vmi~~~l~~~k~y~~~~~~~v~li~~Gv~~~~~~~~~  140 (303)
T PF08449_consen   73 LFFLASVLSNAALKYISYPTQIVFKSSKPIPVMILGVLILGKRYSRRQYLSVLLITIGVAIFTLSDSS  140 (303)
T ss_pred             HHHHHHHHHHHHHHhCChHHHHHHhhhHHHHHHHHHHHhcCccccHHHHHHHHHHHhhHheeeecccc
Confidence            33444444557788888888888899999999999999999999999999999999999999876543

; GO: 0055085 transmembrane transport

>PRK09541 emrE multidrug efflux protein; Reviewed

Probab=96.92  E-value=0.015  Score=43.90  Aligned_cols=59  Identities=15%  Similarity=0.228  Sum_probs=45.0

Q ss_pred             hhhhhhhhhhhHHHHHH--HHHHHHHHHHHHHHHHcCCCccHHHHHHHHHHHHHhHhccCCC
Q 026565          150 LLVSWLMKYADNIIKVY--STSMAMLLTMVLSVYLFNFKPTLQLFLGIIICMMSLHMYFAPP  209 (237)
Q Consensus       150 l~va~vlk~~d~i~k~~--a~s~siv~s~lls~~~f~~~~t~~~~vG~~lV~~s~~lY~~~~  209 (237)
                      .+.+..+|+. ++-.++  -+.+.++.+.+.++++|||++|+..++|..+++.|+..-+...
T Consensus        45 ~~l~~al~~i-pl~iAYavw~GlG~v~~~l~g~~~f~e~~~~~~~~gi~lIi~GVi~l~l~~  105 (110)
T PRK09541         45 WLLAQTLAYI-PTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLVINLLS  105 (110)
T ss_pred             HHHHHHHhhC-CchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcCC
Confidence            3345555654 333334  3446789999999999999999999999999999999876543

>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]

Probab=96.56  E-value=0.44  Score=41.18  Aligned_cols=176  Identities=14%  Similarity=0.090  Sum_probs=96.0

Q ss_pred             HHHHHH-HHHhcCCCCHHHHHHHHHHHHHHhhhcccCCCccccCcccccchhHHHHHHHHHHHHHHHHHHHHHHhhcCCc
Q 026565           13 FSLKFS-RLFLRRRLSTLQWMAIVLLAVGTTTSQVKGCGEALCDSLFAAPIQGYLLGVLSACLSALAGVYTEFLMKKNND   91 (237)
Q Consensus        13 ~tall~-~~~L~~~ls~~qw~al~ll~~Gv~l~~~~~~~~~~~~~~~~~~~~G~~~~l~~a~~sa~a~vy~E~~~K~~~~   91 (237)
                      |+.-+. ..+..||..-.-|+++.++=.+..+-..++.        ++-.-.|..+++.+..+++.-=+.-+|.-+..+.
T Consensus       105 F~GPL~vA~~~sRr~~d~vwvaLAvlGi~lL~p~~~~~--------~~lDp~Gv~~Al~AG~~Wa~YIv~G~r~g~~~~g  176 (292)
T COG5006         105 FTGPLAVALLSSRRLRDFVWVALAVLGIWLLLPLGQSV--------WSLDPVGVALALGAGACWALYIVLGQRAGRAEHG  176 (292)
T ss_pred             hccHHHHHHHhccchhhHHHHHHHHHHHHhheeccCCc--------CcCCHHHHHHHHHHhHHHHHHHHHcchhcccCCC
Confidence            444333 4556777777778777665444433332221        2334579999999999988877777777643321


Q ss_pred             hhHHHHHHHH-HHHHHHHHHHHHhhccccccccCccccccccccchHHHHHHHHH-----HHhhhhhhhhhhhhhHHHHH
Q 026565           92 SLYWQNVQLY-TFGAIFNMFRLLLDDFRGGFEKGPWWQRLFDGYNITTWMVVFNL-----GSTGLLVSWLMKYADNIIKV  165 (237)
Q Consensus        92 ~~~~~n~~L~-~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~il~~-----a~~Gl~va~vlk~~d~i~k~  165 (237)
                      .   +.+-+. ..+.++.+.....       ..|+    -+  +++.....-+..     ++=+.+=...++....-.-+
T Consensus       177 ~---~g~a~gm~vAaviv~Pig~~-------~ag~----~l--~~p~ll~laLgvavlSSalPYsLEmiAL~rlp~~~F~  240 (292)
T COG5006         177 T---AGVAVGMLVAALIVLPIGAA-------QAGP----AL--FSPSLLPLALGVAVLSSALPYSLEMIALRRLPARTFG  240 (292)
T ss_pred             c---hHHHHHHHHHHHHHhhhhhh-------hcch----hh--cChHHHHHHHHHHHHhcccchHHHHHHHhhCChhHHH
Confidence            1   122111 1111111111111       1111    11  122221111111     11122222333444444444


Q ss_pred             HHHHHHHHHHHHHHHHHcCCCccHHHHHHHHHHHHHhHhccCCCCCC
Q 026565          166 YSTSMAMLLTMVLSVYLFNFKPTLQLFLGIIICMMSLHMYFAPPGML  212 (237)
Q Consensus       166 ~a~s~siv~s~lls~~~f~~~~t~~~~vG~~lV~~s~~lY~~~~~~~  212 (237)
                      .-.++.+.+..+.+++++||.+|+..++|...|+.+..=-++..+|+
T Consensus       241 ~LlSLePa~aAl~G~i~L~e~ls~~qwlaI~~ViaAsaG~~lt~~~~  287 (292)
T COG5006         241 TLLSLEPALAALSGLIFLGETLTLIQWLAIAAVIAASAGSTLTARKP  287 (292)
T ss_pred             HHHHhhHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhccccccCCC
Confidence            55556678999999999999999999999999999888666666655

>TIGR00688 rarD rarD protein

Probab=96.52  E-value=0.11  Score=44.29  Aligned_cols=53  Identities=11%  Similarity=0.211  Sum_probs=44.1

Q ss_pred             hhhhhhhhHHHHHHHHHHHHHHHHHHHHHHcCCCccHHHHHHHHHHHHHhHhc
Q 026565          153 SWLMKYADNIIKVYSTSMAMLLTMVLSVYLFNFKPTLQLFLGIIICMMSLHMY  205 (237)
Q Consensus       153 a~vlk~~d~i~k~~a~s~siv~s~lls~~~f~~~~t~~~~vG~~lV~~s~~lY  205 (237)
                      ...++|.+....+....+.++++.++++++++|+++...++|..+.+.|+.+-
T Consensus        88 ~~a~~~~~~~~a~~l~~~~Pi~~~lla~~~l~Ek~~~~~~l~~~~~~~Gv~li  140 (256)
T TIGR00688        88 IWAVNNGSSLEVSLGYLINPLVMVALGRVFLKERISRFQFIAVIIATLGVISN  140 (256)
T ss_pred             HHHHHcchHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHH
Confidence            34456666666667777889999999999999999999999999999887643

This uncharacterized protein is predicted to have many membrane-spanning domains.

>PF13536 EmrE: Multidrug resistance efflux transporter

Probab=96.45  E-value=0.033  Score=41.79  Aligned_cols=60  Identities=18%  Similarity=0.277  Sum_probs=47.9

Q ss_pred             hhhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHcCCCccHHHHHHHHHHHHHhHhccCCC
Q 026565          149 GLLVSWLMKYADNIIKVYSTSMAMLLTMVLSVYLFNFKPTLQLFLGIIICMMSLHMYFAPP  209 (237)
Q Consensus       149 Gl~va~vlk~~d~i~k~~a~s~siv~s~lls~~~f~~~~t~~~~vG~~lV~~s~~lY~~~~  209 (237)
                      ..+....++|.+. .-....+++++++.+++.++|+|+++...++|..++++|+.+-..+.
T Consensus        49 ~~~~~~a~~~~~~-~v~~i~~~~pi~~~ll~~~~~~er~~~~~~~a~~l~~~Gv~li~~~~  108 (113)
T PF13536_consen   49 YLLFFYALSYAPA-LVAAIFSLSPIFTALLSWLFFKERLSPRRWLAILLILIGVILIAWSD  108 (113)
T ss_pred             HHHHHHHHHhCcH-HHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhhhh
Confidence            3444455677774 44466778899999999999999999999999999999997765543

>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function

Probab=96.09  E-value=0.048  Score=48.31  Aligned_cols=36  Identities=19%  Similarity=0.397  Sum_probs=32.4

Q ss_pred             HHHHHHHHHhcCCCCHHHHHHHHHHHHHHhhhcccC
Q 026565           13 FSLKFSRLFLRRRLSTLQWMAIVLLAVGTTTSQVKG   48 (237)
Q Consensus        13 ~tall~~~~L~~~ls~~qw~al~ll~~Gv~l~~~~~   48 (237)
                      ++++++..++|||+++++|.+.++.+.|++++....
T Consensus        89 ~~~~~a~~~l~e~~~~~~~~G~~l~i~G~~liv~~~  124 (300)
T PF05653_consen   89 FNAVLARFFLGEKLTRRDIVGCALIILGSVLIVIFA  124 (300)
T ss_pred             hHHHHhHHHhcccchHhHHhhHHHHHhhheeeEEeC
Confidence            899999999999999999999999999988765433

>COG2510 Predicted membrane protein [Function unknown]

Probab=96.08  E-value=0.0066  Score=46.88  Aligned_cols=34  Identities=35%  Similarity=0.659  Sum_probs=31.9

Q ss_pred             HHHHHHHHHhcCCCCHHHHHHHHHHHHHHhhhcc
Q 026565           13 FSLKFSRLFLRRRLSTLQWMAIVLLAVGTTTSQV   46 (237)
Q Consensus        13 ~tall~~~~L~~~ls~~qw~al~ll~~Gv~l~~~   46 (237)
                      +++++++++||||+|..||+..+++++|++++..
T Consensus       106 l~~lls~lfL~E~ls~~~~iG~~LI~~Gailvs~  139 (140)
T COG2510         106 LAVLLSILFLGERLSLPTWIGIVLIVIGAILVSL  139 (140)
T ss_pred             HHHHHHHHHhcCCCCHHHHHHHHHHHhCeeeEec
Confidence            8999999999999999999999999999988753

>PRK10650 multidrug efflux system protein MdtI; Provisional

Probab=96.00  E-value=0.4  Score=36.10  Aligned_cols=57  Identities=14%  Similarity=0.170  Sum_probs=43.0

Q ss_pred             hhhhhhhhhhhh-HHHHHHHHHHHHHHHHHHHHHHcCCCccHHHHHHHHHHHHHhHhc
Q 026565          149 GLLVSWLMKYAD-NIIKVYSTSMAMLLTMVLSVYLFNFKPTLQLFLGIIICMMSLHMY  205 (237)
Q Consensus       149 Gl~va~vlk~~d-~i~k~~a~s~siv~s~lls~~~f~~~~t~~~~vG~~lV~~s~~lY  205 (237)
                      ..+.+..+|+.+ .+.-+.-+....+.+.+.++++|+|++|+..++|..+++.|+..-
T Consensus        49 f~~Ls~al~~lpvgvAYAvW~GiG~v~~~~ig~~~f~e~~~~~~~~gi~lIi~GVi~l  106 (109)
T PRK10650         49 FSALSQAVKGIDLSVAYALWGGFGIAATLAAGWILFGQRLNRKGWIGLVLLLAGMVMI  106 (109)
T ss_pred             HHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHh
Confidence            344455566552 222344556777999999999999999999999999999998764

>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional

Probab=95.79  E-value=0.86  Score=41.11  Aligned_cols=126  Identities=11%  Similarity=-0.011  Sum_probs=74.3

Q ss_pred             HHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHHHHhhccccccccCcccccccc-ccch-HHHHHHHHHHHhh
Q 026565           72 ACLSALAGVYTEFLMKKNNDSLYWQNVQLYTFGAIFNMFRLLLDDFRGGFEKGPWWQRLFD-GYNI-TTWMVVFNLGSTG  149 (237)
Q Consensus        72 a~~sa~a~vy~E~~~K~~~~~~~~~n~~L~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~-g~~~-~~~~~il~~a~~G  149 (237)
                      =.+|....++++.+++.-+.+.....+|+...++. ..+. .....+..++       +.. .... ....+-+.+....
T Consensus        58 y~~s~~~~~~nK~vl~~~~~P~~l~~~~~~~~~l~-~~~~-~~~~~~~~~~-------~~~~~~~~~~llp~gl~~~~~~  128 (350)
T PTZ00343         58 YALNVLYVVDNKLALNMLPLPWTISSLQLFVGWLF-ALLY-WATGFRKIPR-------IKSLKLFLKNFLPQGLCHLFVH  128 (350)
T ss_pred             HHHHHHHHHHHHHHHHhCChhHHHHHHHHHHHHHH-HHHH-HHhCCCCCCC-------CCCHHHHHHHHHHHHHHHHHHH
Confidence            34567778999999987654666666666543332 2221 1111111000       100 0000 1111112222221


Q ss_pred             hhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHcCCCccHHHHHHHHHHHHHhHhcc
Q 026565          150 LLVSWLMKYADNIIKVYSTSMAMLLTMVLSVYLFNFKPTLQLFLGIIICMMSLHMYF  206 (237)
Q Consensus       150 l~va~vlk~~d~i~k~~a~s~siv~s~lls~~~f~~~~t~~~~vG~~lV~~s~~lY~  206 (237)
                      ...-..+++.+...-....+++++++.++++++++|+++...++|.++++.|+.+-.
T Consensus       129 ~~~~~sl~~~svs~~~iika~~Pvft~lls~~~l~ek~s~~~~l~l~l~v~Gv~l~~  185 (350)
T PTZ00343        129 FGAVISMGLGAVSFTHVVKAAEPVFTALLSILFLKQFLNLYAYLSLIPIVGGVALAS  185 (350)
T ss_pred             HHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHhee
Confidence            111234566666667777888899999999999999999999999999999998765

>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator

Probab=95.77  E-value=0.56  Score=41.05  Aligned_cols=56  Identities=11%  Similarity=0.117  Sum_probs=48.6

Q ss_pred             hhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHcCCCccHHHHHHHHHHHHHhHhcc
Q 026565          151 LVSWLMKYADNIIKVYSTSMAMLLTMVLSVYLFNFKPTLQLFLGIIICMMSLHMYF  206 (237)
Q Consensus       151 ~va~vlk~~d~i~k~~a~s~siv~s~lls~~~f~~~~t~~~~vG~~lV~~s~~lY~  206 (237)
                      +....++|.+...-+...+++++++.++++++++|+++...++|..+++.|+.+-.
T Consensus        81 ~~~~~l~~~s~s~~~li~~~~Pv~~~ll~~~~~~e~~~~~~~~~l~l~~~Gv~l~~  136 (302)
T TIGR00817        81 TSNVSLSKVAVSFTHTIKAMEPFFSVVLSAFFLGQEFPSTLWLSLLPIVGGVALAS  136 (302)
T ss_pred             HHHHHHHhccHHHHHHHHhcchHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHhhhc
Confidence            34456688888888888889999999999999999999999999999999997653

specificities overlap.

>PRK15051 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional

Probab=95.76  E-value=0.018  Score=43.43  Aligned_cols=33  Identities=9%  Similarity=0.188  Sum_probs=31.3

Q ss_pred             HHHHHHHHHhcCCCCHHHHHHHHHHHHHHhhhc
Q 026565           13 FSLKFSRLFLRRRLSTLQWMAIVLLAVGTTTSQ   45 (237)
Q Consensus        13 ~tall~~~~L~~~ls~~qw~al~ll~~Gv~l~~   45 (237)
                      ++++++++++|||++++||.++.++.+|++++.
T Consensus        76 ~~~~~~~l~f~E~ls~~~~~Gi~lii~Gv~~i~  108 (111)
T PRK15051         76 WVTLAAVKLWHEPVSPRHWCGVAFIIGGIVILG  108 (111)
T ss_pred             HHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHh
Confidence            889999999999999999999999999998765

>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]

Probab=95.59  E-value=0.16  Score=37.98  Aligned_cols=58  Identities=19%  Similarity=0.218  Sum_probs=44.6

Q ss_pred             hhhhhhhhhhh-HHHHHHHHHHHHHHHHHHHHHHcCCCccHHHHHHHHHHHHHhHhccC
Q 026565          150 LLVSWLMKYAD-NIIKVYSTSMAMLLTMVLSVYLFNFKPTLQLFLGIIICMMSLHMYFA  207 (237)
Q Consensus       150 l~va~vlk~~d-~i~k~~a~s~siv~s~lls~~~f~~~~t~~~~vG~~lV~~s~~lY~~  207 (237)
                      .+.+..+|+.+ .+.-+.-+...++.+.+.++++|||+++...++|..+++.|+..-+.
T Consensus        45 ~~Ls~alk~ipvgvAYAiW~GiG~v~~~l~g~~~f~E~l~~~~~~gl~LiiaGvi~Lk~  103 (106)
T COG2076          45 YLLSLALKTIPLGVAYAIWTGIGIVGTALVGVLLFGESLSLIKLLGLALILAGVIGLKL  103 (106)
T ss_pred             HHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHhcCCcCCHHHHHHHHHHHHHHHHhhh
Confidence            34455566653 23344566677899999999999999999999999999999876443

>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles

Probab=95.59  E-value=0.091  Score=45.15  Aligned_cols=67  Identities=13%  Similarity=0.141  Sum_probs=58.1

Q ss_pred             HHhhhhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHcCCCccHHHHHHHHHHHHHhHhccCCCCCC
Q 026565          146 GSTGLLVSWLMKYADNIIKVYSTSMAMLLTMVLSVYLFNFKPTLQLFLGIIICMMSLHMYFAPPGML  212 (237)
Q Consensus       146 a~~Gl~va~vlk~~d~i~k~~a~s~siv~s~lls~~~f~~~~t~~~~vG~~lV~~s~~lY~~~~~~~  212 (237)
                      +++..+.-..+++.|..+-.......++.++++++++++.+++...+++..+.+.|+.+...++...
T Consensus        28 ~~qn~L~~~al~~ld~~t~qvl~q~kIl~TAl~s~~~L~r~ls~~qW~aL~lL~~Gv~lv~~~~~~~   94 (244)
T PF04142_consen   28 AIQNNLQFVALSYLDPSTFQVLSQSKILFTALFSVLLLKRRLSRRQWLALFLLVAGVVLVQLSSSQS   94 (244)
T ss_pred             HHHHHHHHHHHHhCCHHHHHHHHhhHHHHHHHHHHHHHHcccchhhHHHHHHHHHHHheeecCCccc
Confidence            3334455567888999998999999999999999999999999999999999999999988876654

P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane

>PRK11431 multidrug efflux system protein; Provisional

Probab=95.52  E-value=0.19  Score=37.52  Aligned_cols=57  Identities=12%  Similarity=0.157  Sum_probs=43.6

Q ss_pred             hhhhhhhhhhh-HHHHHHHHHHHHHHHHHHHHHHcCCCccHHHHHHHHHHHHHhHhcc
Q 026565          150 LLVSWLMKYAD-NIIKVYSTSMAMLLTMVLSVYLFNFKPTLQLFLGIIICMMSLHMYF  206 (237)
Q Consensus       150 l~va~vlk~~d-~i~k~~a~s~siv~s~lls~~~f~~~~t~~~~vG~~lV~~s~~lY~  206 (237)
                      .+.+..+|+.+ .+.-+.-+.+.++.+.++++++|+|++|+..++|..+++.|+..-+
T Consensus        44 ~~Ls~al~~ip~gvaYAvW~GiG~v~~~lig~~~f~e~~~~~~~~gi~lIi~GVv~l~  101 (105)
T PRK11431         44 ALLAWAMKSLPVGTAYAVWTGIGAVGAAITGIVLLGESASPARLLSLALIVAGIIGLK  101 (105)
T ss_pred             HHHHHHHhhCCcHhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHhhh
Confidence            34444555442 3334556667789999999999999999999999999999987644

>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown

Probab=95.34  E-value=0.023  Score=42.17  Aligned_cols=37  Identities=30%  Similarity=0.442  Sum_probs=33.6

Q ss_pred             ChhHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhhhc
Q 026565            8 TRPFHFSLKFSRLFLRRRLSTLQWMAIVLLAVGTTTSQ   45 (237)
Q Consensus         8 ~~p~~~tall~~~~L~~~ls~~qw~al~ll~~Gv~l~~   45 (237)
                      ..|+ ++.+++++++||+++++||.++++...|+.++.
T Consensus        89 ~~pv-~~~i~~~~~~~e~~~~~~~~g~~l~~~g~~l~~  125 (126)
T PF00892_consen   89 LSPV-FAAILGWLFLGERPSWRQIIGIILIIIGVVLIS  125 (126)
T ss_pred             HHHH-HHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHH
Confidence            5566 999999999999999999999999999998764

Many members of this family are classed as drug/metabolite transporters and have no known function. They are predicted to be integral membrane proteins and many of the proteins contain two copies of this domain [].; GO: 0016020 membrane

>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional

Probab=95.27  E-value=1.1  Score=38.99  Aligned_cols=50  Identities=18%  Similarity=0.250  Sum_probs=40.8

Q ss_pred             hhhhHHHHHHHHHHHHHHHHHHHHHHcCCCccHHHHHHHHHHHHHhHhccC
Q 026565          157 KYADNIIKVYSTSMAMLLTMVLSVYLFNFKPTLQLFLGIIICMMSLHMYFA  207 (237)
Q Consensus       157 k~~d~i~k~~a~s~siv~s~lls~~~f~~~~t~~~~vG~~lV~~s~~lY~~  207 (237)
                      ++.++-..+...++.++++.+++.+ ++|+++...++|..+.++|+++-..
T Consensus        92 ~~~~a~~a~~l~~~~Pl~~~lla~~-~~e~~~~~~~~~~~la~~Gv~ll~~  141 (292)
T PRK11272         92 QNVPSGIAAVVVATVPLFTLCFSRL-FGIRTRKLEWLGIAIGLAGIVLLNS  141 (292)
T ss_pred             ccCcHHHHHHHHHHHHHHHHHHHHH-hcccCchhHHHHHHHHHHhHHHHhc
Confidence            5555555667777889999999975 7999999999999999999887653

>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein

Probab=95.19  E-value=0.86  Score=39.98  Aligned_cols=129  Identities=11%  Similarity=0.001  Sum_probs=70.2

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHHHHhhccccccccCccccccccccchHHHHHHH
Q 026565           64 GYLLGVLSACLSALAGVYTEFLMKKNNDSLYWQNVQLYTFGAIFNMFRLLLDDFRGGFEKGPWWQRLFDGYNITTWMVVF  143 (237)
Q Consensus        64 G~~~~l~~a~~sa~a~vy~E~~~K~~~~~~~~~n~~L~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~il  143 (237)
                      |+++++++++++|..++..++.. +- +..|  .+...+...++..........+            ++......+.++.
T Consensus         2 ~~l~~lia~~~wGs~g~~~k~~~-g~-~~~~--~~~~~~g~l~~~~~~~~~~~~~------------~~~~~~~~~g~l~   65 (290)
T TIGR00776         2 DILIALIPALFWGSFVLINVKIG-GG-PYSQ--TLGTTFGALILSIAIAIFVLPE------------FWALSIFLVGLLS   65 (290)
T ss_pred             chHHHHHHHHHHhhhHHHHhccC-CC-HHHH--HHHHHHHHHHHHHHHHHHhCCc------------ccccHHHHHHHHH
Confidence            57789999999999999987764 21 1222  2222222222222222221100            0101111111111


Q ss_pred             --HHHHhhhhhhhhhhhhhHHHHH-HHHHHHHHHHHHHHHHHcCCCccHHH----HHHHHHHHHHhHhccCC
Q 026565          144 --NLGSTGLLVSWLMKYADNIIKV-YSTSMAMLLTMVLSVYLFNFKPTLQL----FLGIIICMMSLHMYFAP  208 (237)
Q Consensus       144 --~~a~~Gl~va~vlk~~d~i~k~-~a~s~siv~s~lls~~~f~~~~t~~~----~vG~~lV~~s~~lY~~~  208 (237)
                        .-+.+.+..-..+|+.+--+.- ..+.+..+++.+.+.++|+|+.+...    ++|.+++++|+++....
T Consensus        66 G~~w~ig~~~~~~ai~~~gva~a~~i~~~~~~v~~~l~~~~~f~e~~t~~~~~~~~~g~~l~l~G~~l~~~~  137 (290)
T TIGR00776        66 GAFWALGQINQFKSMRYMGVSKTMPISTGFQLVGGTLFGVIVFGEWSTSIQTLLGLLALILIIIGVYLTSRS  137 (290)
T ss_pred             HHHHHhhhhhHHHHHHHHhHHHHhHHHHHHHHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHhHheEEec
Confidence              0112223223334554222221 22446677899999999999999999    99999999999987654

These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.

>PRK10452 multidrug efflux system protein MdtJ; Provisional

Probab=95.06  E-value=0.056  Score=41.42  Aligned_cols=36  Identities=22%  Similarity=0.289  Sum_probs=33.2

Q ss_pred             HHHHHHHHHhcCCCCHHHHHHHHHHHHHHhhhcccC
Q 026565           13 FSLKFSRLFLRRRLSTLQWMAIVLLAVGTTTSQVKG   48 (237)
Q Consensus        13 ~tall~~~~L~~~ls~~qw~al~ll~~Gv~l~~~~~   48 (237)
                      .+++++.++++|++++.||+++.++++|++.....+
T Consensus        70 ~~~~ig~~~f~E~~s~~~~~gi~lIi~GVi~l~l~~  105 (120)
T PRK10452         70 FITLFSVLLFDESLSLMKIAGLTTLVAGIVLIKSGT  105 (120)
T ss_pred             HHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhhcCC
Confidence            788999999999999999999999999999887654

>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter

Probab=95.05  E-value=0.72  Score=39.06  Aligned_cols=56  Identities=13%  Similarity=0.045  Sum_probs=47.2

Q ss_pred             hhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHcCCCccHHHHHHHHHHHHHhHhccC
Q 026565          152 VSWLMKYADNIIKVYSTSMAMLLTMVLSVYLFNFKPTLQLFLGIIICMMSLHMYFA  207 (237)
Q Consensus       152 va~vlk~~d~i~k~~a~s~siv~s~lls~~~f~~~~t~~~~vG~~lV~~s~~lY~~  207 (237)
                      ...-++|.+....+...++.++++.+++.++++|++++..++|..+.++|+.+...
T Consensus        64 ~~~a~~~~~~~~~~ii~~~~P~~~~~~~~l~~~e~~~~~~~~gi~i~~~Gv~li~~  119 (260)
T TIGR00950        64 YFVAVKRLPVGEAALLLYLAPLYVTLLSDLMGKERPRKLVLLAAVLGLAGAVLLLS  119 (260)
T ss_pred             HHHHHHhcChhhhHHHHhhhHHHHHHHHHHHccCCCcHHHHHHHHHHHHhHHhhcc
Confidence            33445666666667788888999999999999999999999999999999888654

>PLN00411 nodulin MtN21 family protein; Provisional

Probab=94.91  E-value=1.9  Score=39.12  Aligned_cols=55  Identities=13%  Similarity=0.303  Sum_probs=47.6

Q ss_pred             hhhhhhhhhHHHHHHHHHHHHHHHHHHHHHH------cCCCccHHHHHHHHHHHHHhHhcc
Q 026565          152 VSWLMKYADNIIKVYSTSMAMLLTMVLSVYL------FNFKPTLQLFLGIIICMMSLHMYF  206 (237)
Q Consensus       152 va~vlk~~d~i~k~~a~s~siv~s~lls~~~------f~~~~t~~~~vG~~lV~~s~~lY~  206 (237)
                      ...-++|.++...+...++.++++.++++++      ++|+++...++|..+.+.|+.+-.
T Consensus        95 ~~~gl~~tsa~~asll~~~~P~~~~lla~~~~~e~~~~~er~~~~~~~G~~l~~~Gv~ll~  155 (358)
T PLN00411         95 GYIGIEYSNPTLASAISNITPALTFILAIIFRMEKVSFKERSSVAKVMGTILSLIGALVVI  155 (358)
T ss_pred             HHHHHhhccHHHHHHHHHhhHHHHHHHHHHHHhchhhhcccccHHHHHHHHHHHHHHHHHH
Confidence            3445688888888999999999999999998      699999999999999999887543

>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]

Probab=94.86  E-value=0.06  Score=40.26  Aligned_cols=35  Identities=14%  Similarity=0.231  Sum_probs=32.4

Q ss_pred             HHHHHHHHHhcCCCCHHHHHHHHHHHHHHhhhccc
Q 026565           13 FSLKFSRLFLRRRLSTLQWMAIVLLAVGTTTSQVK   47 (237)
Q Consensus        13 ~tall~~~~L~~~ls~~qw~al~ll~~Gv~l~~~~   47 (237)
                      .+++.+++++||+++..|++++.++.+|++.....
T Consensus        70 ~~~l~g~~~f~E~l~~~~~~gl~LiiaGvi~Lk~~  104 (106)
T COG2076          70 GTALVGVLLFGESLSLIKLLGLALILAGVIGLKLG  104 (106)
T ss_pred             HHHHHHHHhcCCcCCHHHHHHHHHHHHHHHHhhhc
Confidence            78999999999999999999999999999887653

>PRK13499 rhamnose-proton symporter; Provisional

Probab=94.85  E-value=2.9  Score=37.81  Aligned_cols=68  Identities=15%  Similarity=0.121  Sum_probs=44.6

Q ss_pred             HHHHHHHHHhcCC---CCHH----HHHHHHHHHHHHhhhcc----cCCCccccCcccccchhHHHHHHHHHHHHHHHHH
Q 026565           13 FSLKFSRLFLRRR---LSTL----QWMAIVLLAVGTTTSQV----KGCGEALCDSLFAAPIQGYLLGVLSACLSALAGV   80 (237)
Q Consensus        13 ~tall~~~~L~~~---ls~~----qw~al~ll~~Gv~l~~~----~~~~~~~~~~~~~~~~~G~~~~l~~a~~sa~a~v   80 (237)
                      .++++..++++|=   ++..    -..+++++++|+++...    ++.+++.+++...+.-.|+..++++.+.|++-..
T Consensus       113 ~gtL~~~i~~gew~~~~~t~~g~~~~~gv~liliGi~l~s~Ag~~k~~~~~~~~~~~~~~~KGi~ialisgi~~~~f~~  191 (345)
T PRK13499        113 VGTLMPPIINGNFDVLLATNGGRMTLLGVLVALIGVAIVGRAGQLKERKMGIKKAEEFNLKKGLILAVMSGIFSACFSF  191 (345)
T ss_pred             HHHHHHHHHccccccccccchHHHHHHHHHHHHHHHHHHHHhhhhcccccccccccccchHhHHHHHHHHHHHHHHHHH
Confidence            6677777777732   2333    36678888999999887    4332211101234556799999999999888773

>PRK11689 aromatic amino acid exporter; Provisional

Probab=94.70  E-value=1  Score=39.43  Aligned_cols=50  Identities=14%  Similarity=0.166  Sum_probs=42.4

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHcCCCccHHHHHHHHHHHHHhHhccCC
Q 026565          159 ADNIIKVYSTSMAMLLTMVLSVYLFNFKPTLQLFLGIIICMMSLHMYFAP  208 (237)
Q Consensus       159 ~d~i~k~~a~s~siv~s~lls~~~f~~~~t~~~~vG~~lV~~s~~lY~~~  208 (237)
                      .++...+...++.++++.++++++++|+++...++|..+.++|+.+-..+
T Consensus        89 ~~a~~a~~l~~~~Pi~~~ll~~~~~~e~~~~~~~~g~~l~~~Gv~li~~~  138 (295)
T PRK11689         89 RQAIEVGMVNYLWPSLTILFAVLFNGQKANWLLIPGLLLALAGVAWVLGG  138 (295)
T ss_pred             ccchHHHHHHHHhHHHHHHHHHHHhcCCccHHHHHHHHHHHHhHhheecC
Confidence            34555567778889999999999999999999999999999999776543

>PRK11453 O-acetylserine/cysteine export protein; Provisional

Probab=94.69  E-value=1.9  Score=37.72  Aligned_cols=52  Identities=12%  Similarity=0.264  Sum_probs=41.8

Q ss_pred             hhh-hhHHHHHHHHHHHHHHHHHHHHHHcCCCccHHHHHHHHHHHHHhHhccC
Q 026565          156 MKY-ADNIIKVYSTSMAMLLTMVLSVYLFNFKPTLQLFLGIIICMMSLHMYFA  207 (237)
Q Consensus       156 lk~-~d~i~k~~a~s~siv~s~lls~~~f~~~~t~~~~vG~~lV~~s~~lY~~  207 (237)
                      ++| ...-..+...++.++++.++++++++|+++...++|.++.++|+.+-..
T Consensus        80 ~~~~~~a~~a~~l~~~~pi~~~ll~~~~l~e~~~~~~~~~~~l~~~Gv~ll~~  132 (299)
T PRK11453         80 INFGMPAGLASLVLQAQAFFTIVLGAFTFGERLQGKQLAGIALAIFGVLVLIE  132 (299)
T ss_pred             HHhcCCHHHHHHHHHhHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHhHHHhcc
Confidence            344 2444555667788899999999999999999999999999999876553

>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function

Probab=94.57  E-value=1.9  Score=38.85  Aligned_cols=59  Identities=17%  Similarity=0.310  Sum_probs=46.4

Q ss_pred             hhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHcCCCccHHHHHHHHHHHHHhHhccCCC
Q 026565          151 LVSWLMKYADNIIKVYSTSMAMLLTMVLSVYLFNFKPTLQLFLGIIICMMSLHMYFAPP  209 (237)
Q Consensus       151 ~va~vlk~~d~i~k~~a~s~siv~s~lls~~~f~~~~t~~~~vG~~lV~~s~~lY~~~~  209 (237)
                      ++-..++|.+-..-..-.+.+++++.++|+++++++.++..++|..+++.|+.+-....
T Consensus        95 ~~v~a~~yTsvtS~~lL~~~~i~~~~~LS~~fL~~ry~~~~~~gv~i~i~Gv~lv~~sD  153 (334)
T PF06027_consen   95 LVVLAYQYTSVTSVQLLDCTSIPFVMILSFIFLKRRYSWFHILGVLICIAGVVLVVVSD  153 (334)
T ss_pred             HHHHHhhcccHhHHHhhhhhhhHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhheeeec
Confidence            33444566644444566778899999999999999999999999999999987665543

Some of the sequences in this family are annotated as putative membrane proteins.

>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]

Probab=94.55  E-value=2.5  Score=35.75  Aligned_cols=56  Identities=21%  Similarity=0.370  Sum_probs=45.6

Q ss_pred             hhhhhHHHHHHHHHHHHHHHHHHHH-HHcCCCccHHHHHHHHHHHHHhHhccCCCCC
Q 026565          156 MKYADNIIKVYSTSMAMLLTMVLSV-YLFNFKPTLQLFLGIIICMMSLHMYFAPPGM  211 (237)
Q Consensus       156 lk~~d~i~k~~a~s~siv~s~lls~-~~f~~~~t~~~~vG~~lV~~s~~lY~~~~~~  211 (237)
                      ++|.+.-......+..++++.+++. ++++|+++...+.|..+.+.|+.+-..+...
T Consensus        91 ~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Gv~lv~~~~~~  147 (292)
T COG0697          91 LKYTSASVASLIIGLLPLFTALLAVLLLLGERLSLLQILGILLALAGVLLILLGGGG  147 (292)
T ss_pred             HhhcchHHHHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHhHHheecCCCc
Confidence            4555555566677788899999996 6779999999999999999999988876554

>PRK09541 emrE multidrug efflux protein; Reviewed

Probab=94.49  E-value=0.093  Score=39.56  Aligned_cols=36  Identities=17%  Similarity=0.243  Sum_probs=33.0

Q ss_pred             HHHHHHHHHhcCCCCHHHHHHHHHHHHHHhhhcccC
Q 026565           13 FSLKFSRLFLRRRLSTLQWMAIVLLAVGTTTSQVKG   48 (237)
Q Consensus        13 ~tall~~~~L~~~ls~~qw~al~ll~~Gv~l~~~~~   48 (237)
                      .+++++++++||++++.|+.++.++.+|++.....+
T Consensus        70 ~~~l~g~~~f~e~~~~~~~~gi~lIi~GVi~l~l~~  105 (110)
T PRK09541         70 LISLLSWGFFGQRLDLPAIIGMMLICAGVLVINLLS  105 (110)
T ss_pred             HHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcCC
Confidence            678999999999999999999999999999987543

>PF04657 DUF606: Protein of unknown function, DUF606; InterPro: IPR006750 This family contains uncharacterised bacterial proteins

Probab=94.32  E-value=2  Score=33.58  Aligned_cols=128  Identities=15%  Similarity=0.186  Sum_probs=69.5

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHHHHhhccccccccCccccccccccchHHHHHHHH
Q 026565           65 YLLGVLSACLSALAGVYTEFLMKKNNDSLYWQNVQLYTFGAIFNMFRLLLDDFRGGFEKGPWWQRLFDGYNITTWMVVFN  144 (237)
Q Consensus        65 ~~~~l~~a~~sa~a~vy~E~~~K~~~~~~~~~n~~L~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~il~  144 (237)
                      +++++.+..+.++.+..|-++-|+-+++ +.-+..-+..+.+...+.....+.....        -..+.++|.|.   .
T Consensus         3 ~lla~~aG~~i~~q~~~N~~L~~~~gs~-~~as~i~~~~G~i~~~i~~~~~~~~~~~--------~~~~~p~w~~l---G   70 (138)
T PF04657_consen    3 ILLALLAGALIALQAAFNGQLGKALGSP-LVASFISFGVGFILLLIILLITGRPSLA--------SLSSVPWWAYL---G   70 (138)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhCcc-HHHHHHHHHHHHHHHHHHHHHhcccccc--------hhccCChHHhc---c
Confidence            4566777778888888898888776533 4455556666666666655444322111        11122333222   2


Q ss_pred             HHHhhhhhh---hhhhhhhHHHHH-HHHHHHHHHHHHHHHH-HcC---CCccHHHHHHHHHHHHHhHh
Q 026565          145 LGSTGLLVS---WLMKYADNIIKV-YSTSMAMLLTMVLSVY-LFN---FKPTLQLFLGIIICMMSLHM  204 (237)
Q Consensus       145 ~a~~Gl~va---~vlk~~d~i~k~-~a~s~siv~s~lls~~-~f~---~~~t~~~~vG~~lV~~s~~l  204 (237)
                      ..++...+.   ..++..+..... ....-.++.+.+++.+ +||   +++++..++|..+++.|+++
T Consensus        71 G~lG~~~V~~~~~~vp~lG~~~~~~l~~~GQl~~sl~iD~fG~fg~~~~~~~~~r~lG~~l~i~Gv~L  138 (138)
T PF04657_consen   71 GLLGVFFVLSNIILVPRLGAALTTILIVAGQLIASLLIDHFGLFGAPKRPFSLRRILGLALMIAGVIL  138 (138)
T ss_pred             HHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHccccCCCCCCCCHHHHHHHHHHHHHHhC
Confidence            222222222   222222221111 1122224566677765 443   77999999999999999864

>PF00893 Multi_Drug_Res: Small Multidrug Resistance protein; InterPro: IPR000390 Members of this family which have been characterised, belong to the small multidrug resistance (Smr) protein family and are integral membrane proteins

Probab=94.20  E-value=0.22  Score=36.13  Aligned_cols=49  Identities=18%  Similarity=0.262  Sum_probs=25.6

Q ss_pred             hhhhhhhhhhhHHH-HHHHHHHHHHHHHHHHHHHcCCCccHHHHHHHHHH
Q 026565          150 LLVSWLMKYADNII-KVYSTSMAMLLTMVLSVYLFNFKPTLQLFLGIIIC  198 (237)
Q Consensus       150 l~va~vlk~~d~i~-k~~a~s~siv~s~lls~~~f~~~~t~~~~vG~~lV  198 (237)
                      .+.+..+|+.+--+ -...+.+..+.+.++++++|||++|+..++|..++
T Consensus        44 ~~l~~al~~lp~~vaYavw~g~g~v~~~~~~~~~f~E~~s~~~~~gi~lI   93 (93)
T PF00893_consen   44 YFLSLALKKLPLSVAYAVWTGLGIVGVTLVGVFFFGESLSLSKWLGIGLI   93 (93)
T ss_dssp             HHHHHHH-------HHHHHHHHHHHHHHHHHHHHH--------HHHHHHH
T ss_pred             HHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHhheeeC
Confidence            44455566654332 23455678899999999999999999999999875

They confer resistance to a wide range of toxic compounds by removing them for the cells. The efflux is coupled to an influx of protons. An example is Escherichia coli mvrC P23895 from SWISSPROT which prevents the incorporation of methyl viologen into cells [] and is involved in ethidium bromide efflux [].; GO: 0016021 integral to membrane; PDB: 2I68_A.

>PRK02971 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional

Probab=94.09  E-value=0.13  Score=39.79  Aligned_cols=36  Identities=6%  Similarity=0.079  Sum_probs=29.5

Q ss_pred             HHHHHHH--HHhcCCCCHHHHHHHHHHHHHHhhhcccC
Q 026565           13 FSLKFSR--LFLRRRLSTLQWMAIVLLAVGTTTSQVKG   48 (237)
Q Consensus        13 ~tall~~--~~L~~~ls~~qw~al~ll~~Gv~l~~~~~   48 (237)
                      ++++.++  +++||++|++||++++++++|+.+++.++
T Consensus        87 ~v~~~~~~~~~~~E~ls~~~~iGi~lIi~GV~lv~~~~  124 (129)
T PRK02971         87 LVYLAAMLLPWFNETFSLKKTLGVACIMLGVWLINLPT  124 (129)
T ss_pred             HHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhccCC
Confidence            3444555  38999999999999999999999988544

>PRK11431 multidrug efflux system protein; Provisional

Probab=94.04  E-value=0.1  Score=39.03  Aligned_cols=34  Identities=12%  Similarity=0.153  Sum_probs=31.7

Q ss_pred             HHHHHHHHHhcCCCCHHHHHHHHHHHHHHhhhcc
Q 026565           13 FSLKFSRLFLRRRLSTLQWMAIVLLAVGTTTSQV   46 (237)
Q Consensus        13 ~tall~~~~L~~~ls~~qw~al~ll~~Gv~l~~~   46 (237)
                      .+++.+++++||++++.||.++.++.+|++....
T Consensus        69 ~~~lig~~~f~e~~~~~~~~gi~lIi~GVv~l~l  102 (105)
T PRK11431         69 GAAITGIVLLGESASPARLLSLALIVAGIIGLKL  102 (105)
T ss_pred             HHHHHHHHHhCCCCCHHHHHHHHHHHHHHHhhhc
Confidence            7899999999999999999999999999988764

>PRK10650 multidrug efflux system protein MdtI; Provisional

Probab=93.63  E-value=0.13  Score=38.77  Aligned_cols=33  Identities=24%  Similarity=0.489  Sum_probs=30.8

Q ss_pred             HHHHHHHHHhcCCCCHHHHHHHHHHHHHHhhhc
Q 026565           13 FSLKFSRLFLRRRLSTLQWMAIVLLAVGTTTSQ   45 (237)
Q Consensus        13 ~tall~~~~L~~~ls~~qw~al~ll~~Gv~l~~   45 (237)
                      .+++.+.+++||++++.||.++.++..|++...
T Consensus        75 ~~~~ig~~~f~e~~~~~~~~gi~lIi~GVi~lk  107 (109)
T PRK10650         75 ATLAAGWILFGQRLNRKGWIGLVLLLAGMVMIK  107 (109)
T ss_pred             HHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhc
Confidence            788999999999999999999999999998765

>PF10639 UPF0546: Uncharacterised protein family UPF0546; InterPro: IPR018908 This family of proteins has no known function

Probab=92.61  E-value=0.3  Score=36.99  Aligned_cols=62  Identities=19%  Similarity=0.214  Sum_probs=45.5

Q ss_pred             HHHHHhhhhhhhhhhhhhHHHHH-HHHHHHHHHHHHHHHHHcCCCccHHHHHHHHHHHHHhHh
Q 026565          143 FNLGSTGLLVSWLMKYADNIIKV-YSTSMAMLLTMVLSVYLFNFKPTLQLFLGIIICMMSLHM  204 (237)
Q Consensus       143 l~~a~~Gl~va~vlk~~d~i~k~-~a~s~siv~s~lls~~~f~~~~t~~~~vG~~lV~~s~~l  204 (237)
                      +.|.++.+.--..+...|=.+.. .+++++.+++.+.++++.++..+...++|+.+|+.|+.+
T Consensus        49 ~lNq~GSv~f~~~L~~~dlSlavPi~Nsl~fvfT~l~g~~lge~~~~~~~~~G~~Li~~Gv~L  111 (113)
T PF10639_consen   49 LLNQSGSVLFFLLLGSADLSLAVPIANSLAFVFTALTGWLLGEEVISRRTWLGMALILAGVAL  111 (113)
T ss_pred             HHHHHHHHHHHHHHhcCCceeeehHHhHHHHHHHHHHHHHhcCcccchhHHHHHHHHHcCeee
Confidence            34444444444445555433333 467999999999999999888999999999999998864

Many members are annotated as potential transmembrane proteins.

>KOG2922 consensus Uncharacterized conserved protein [Function unknown]

Probab=92.56  E-value=0.25  Score=43.96  Aligned_cols=177  Identities=20%  Similarity=0.305  Sum_probs=91.9

Q ss_pred             HHHHHHHHHhcCCCCHHHHHHHHHHHHHHhhhcccCCCccccCcc-------cccchhHHHHHHHHHHHHHHHHHHHHHH
Q 026565           13 FSLKFSRLFLRRRLSTLQWMAIVLLAVGTTTSQVKGCGEALCDSL-------FAAPIQGYLLGVLSACLSALAGVYTEFL   85 (237)
Q Consensus        13 ~tall~~~~L~~~ls~~qw~al~ll~~Gv~l~~~~~~~~~~~~~~-------~~~~~~G~~~~l~~a~~sa~a~vy~E~~   85 (237)
                      ++++++..+|+|+++..-.++.++.++|..+......++.+-++.       .+..++.+...+...++   .-+   ..
T Consensus       103 ~saila~~~L~Ekl~~~g~lGc~l~v~Gst~iV~haP~e~~i~t~~el~~~~~~~~Fliy~~~iil~~~---il~---~~  176 (335)
T KOG2922|consen  103 ISAILASFFLKEKLNLLGILGCVLCVVGSTTIVIHAPKEQEIESVEEVWELATEPGFLVYVIIIILIVL---ILI---FF  176 (335)
T ss_pred             HHHHHHHHHHHHHHHHhhhhheeEEecccEEEEEecCcccccccHHHHHHHhcCccHHHHHHHHHHHHH---HHh---ee
Confidence            689999999999999999999999999987776554443322111       11122222222211111   111   11


Q ss_pred             hh-cCCchhHHHHHHHHH--HHHHHHHH-------HHHhhccccccccCccccccccccchHHHHHHHHHHHhhhhhhhh
Q 026565           86 MK-KNNDSLYWQNVQLYT--FGAIFNMF-------RLLLDDFRGGFEKGPWWQRLFDGYNITTWMVVFNLGSTGLLVSWL  155 (237)
Q Consensus        86 ~K-~~~~~~~~~n~~L~~--~~~~~~~~-------~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~il~~a~~Gl~va~v  155 (237)
                      +| +++    ..|+..|+  .+.+-++-       +..+...   . +|.    ... ..+.+|..++..   ..++..=
T Consensus       177 ~~p~~g----~tnilvyi~i~s~iGS~tV~svKalg~aiklt---~-~g~----~ql-~~~~ty~~~l~~---~~~~~~Q  240 (335)
T KOG2922|consen  177 YAPRYG----QTNILVYIGICSLIGSLTVMSVKALGIAIKLT---F-SGN----NQL-FYPLTWIFLLVV---ATCVSTQ  240 (335)
T ss_pred             eccccc----ccceeehhhHhhhhcceeeeeHHHHHHHHHHH---h-cCC----ccc-ccHHHHHHHHHH---HHHHHHH
Confidence            12 222    12554443  22221111       0111100   0 010    011 112344333221   2445556


Q ss_pred             hhhhhHHHHHHHHHHHH--------HHHHHHHHHHcCCC--c----cHHHHHHHHHHHHHhHhccCCCCC
Q 026565          156 MKYADNIIKVYSTSMAM--------LLTMVLSVYLFNFK--P----TLQLFLGIIICMMSLHMYFAPPGM  211 (237)
Q Consensus       156 lk~~d~i~k~~a~s~si--------v~s~lls~~~f~~~--~----t~~~~vG~~lV~~s~~lY~~~~~~  211 (237)
                      ++|++.-++.+-+++..        .++++.|..+|.|-  .    ...++.|...++.|+++-+...++
T Consensus       241 ~~yLNkAL~~fntslV~PiyyV~fTtl~I~as~I~Fkew~~~~~~~i~~~~~Gf~ti~~G~flL~~~kd~  310 (335)
T KOG2922|consen  241 MNYLNKALDLFNTSIVSPIYYVMFTTLVILASAILFKEWSGQDALDIAGELCGFVTIFLGIFLLHRTKDM  310 (335)
T ss_pred             HHHHHHHHHhhhhhhcchhHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHhHHHhhheeeEeeeeccc
Confidence            78887777777665442        35777888888643  2    234788999999999988665443

>PRK13499 rhamnose-proton symporter; Provisional

Probab=91.11  E-value=3.7  Score=37.19  Aligned_cols=135  Identities=13%  Similarity=0.148  Sum_probs=74.4

Q ss_pred             cchhHHHHHHHHHHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHH----HHh--hccccccccCccccccccc
Q 026565           60 APIQGYLLGVLSACLSALAGVYTEFLMKKNNDSLYWQNVQLYTFGAIFNMFR----LLL--DDFRGGFEKGPWWQRLFDG  133 (237)
Q Consensus        60 ~~~~G~~~~l~~a~~sa~a~vy~E~~~K~~~~~~~~~n~~L~~~~~~~~~~~----~~~--~~~~~~~~~g~~~~~~~~g  133 (237)
                      +...|+++.+++++++|--.+=++| .|+-+   | |+++. ..++...++.    ..+  .+..+          ....
T Consensus         4 ~~~~G~~~~~i~~~~~GS~~~p~K~-~k~w~---w-E~~W~-v~gi~~wl~~~~~~g~~~~~~f~~----------~~~~   67 (345)
T PRK13499          4 AIILGIIWHLIGGASSGSFYAPFKK-VKKWS---W-ETMWS-VGGIFSWLILPWLIAALLLPDFWA----------YYSS   67 (345)
T ss_pred             hhHHHHHHHHHHHHHhhcccccccc-cCCCc---h-hHHHH-HHHHHHHHHHHHHHHHHHhhhHHH----------HHHh
Confidence            4678999999999987766665554 55543   2 23333 2222111111    111  11111          1111


Q ss_pred             cchHHH--HHH--HHHHHhhhhhhhhhhhhhH-HHHHHHHHHHHHHHHHHHHHHcCCCc-------cHHHHHHHHHHHHH
Q 026565          134 YNITTW--MVV--FNLGSTGLLVSWLMKYADN-IIKVYSTSMAMLLTMVLSVYLFNFKP-------TLQLFLGIIICMMS  201 (237)
Q Consensus       134 ~~~~~~--~~i--l~~a~~Gl~va~vlk~~d~-i~k~~a~s~siv~s~lls~~~f~~~~-------t~~~~vG~~lV~~s  201 (237)
                      .++..+  ..+  +.=+++++.....+||.+- ..-..++.+..+.+.++..++|||-.       ....++|.+++++|
T Consensus        68 ~~~~~~~~~~l~G~~W~iG~i~~~~s~~~iGvS~~~pIs~Gl~lv~gtL~~~i~~gew~~~~~t~~g~~~~~gv~liliG  147 (345)
T PRK13499         68 FSGSTLLPVFLFGALWGIGGITYGLTMRYLGMSLGIGIAIGITLIVGTLMPPIINGNFDVLLATNGGRMTLLGVLVALIG  147 (345)
T ss_pred             cCHHHHHHHHHHHHHHHhhhhhHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHccccccccccchHHHHHHHHHHHHHH
Confidence            222222  111  1113345666666777632 22334556778899999999998533       23478899999999


Q ss_pred             hHhccCCCC
Q 026565          202 LHMYFAPPG  210 (237)
Q Consensus       202 ~~lY~~~~~  210 (237)
                      +.+-+..-.
T Consensus       148 i~l~s~Ag~  156 (345)
T PRK13499        148 VAIVGRAGQ  156 (345)
T ss_pred             HHHHHHhhh
Confidence            998887433

>TIGR00803 nst UDP-galactose transporter

Probab=89.19  E-value=4.1  Score=33.90  Aligned_cols=86  Identities=16%  Similarity=0.061  Sum_probs=61.6

Q ss_pred             CCChhHH---------HHHHHHHHHhcCCCCHHHHHHHHHHHHHHhhhcccCCCcc------------ccCcc-cccchh
Q 026565            6 MITRPFH---------FSLKFSRLFLRRRLSTLQWMAIVLLAVGTTTSQVKGCGEA------------LCDSL-FAAPIQ   63 (237)
Q Consensus         6 ~i~~p~~---------~tall~~~~L~~~ls~~qw~al~ll~~Gv~l~~~~~~~~~------------~~~~~-~~~~~~   63 (237)
                      |+++|.|         ++++..+.+.+||++..|+++..+++.|+....+.+.+..            +.++. ......
T Consensus         1 ~isvPa~~~~~s~~l~~v~l~~~~~~~~~~~~~~i~~~~l~~~g~l~~~ls~~q~~al~~l~~~~~~~~~~~~~~~~~~~   80 (222)
T TIGR00803         1 KLSVPIHIIFKQNNLVLIALGNLLAAGKQVTQLKILSTALMTLGSLVASLGDDQWFSLKLLKLGVAIVQMVQSSAKTLMF   80 (222)
T ss_pred             CccccchHHHHhcchHHHHHhcccccceeeehHHHHHHHHHHHHHHHhHhhHHHHHHHHHHHHhHeeeecCCCCcccccc
Confidence            5788888         8999999999999999999999999999988766543210            00001 111344


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhcCCc
Q 026565           64 GYLLGVLSACLSALAGVYTEFLMKKNND   91 (237)
Q Consensus        64 G~~~~l~~a~~sa~a~vy~E~~~K~~~~   91 (237)
                      |.....+.+++.++..-+.+.+++++..
T Consensus        81 g~~~~g~~~~l~a~~~~~~~~~y~e~~~  108 (222)
T TIGR00803        81 GNPVVGLSAVLSALLSSGFAGVYFEKIL  108 (222)
T ss_pred             ccHHHHHHHHHHHHHHHhhhHHHHHHcc
Confidence            7776667777777777777888777643

NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids.

>PF04342 DUF486: Protein of unknown function, DUF486; InterPro: IPR007437 This family contains several proteins of uncharacterised function

Probab=88.37  E-value=1.2  Score=33.20  Aligned_cols=44  Identities=7%  Similarity=0.180  Sum_probs=36.2

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHcCCCccHHHHHHHHHHHHHhHh
Q 026565          161 NIIKVYSTSMAMLLTMVLSVYLFNFKPTLQLFLGIIICMMSLHM  204 (237)
Q Consensus       161 ~i~k~~a~s~siv~s~lls~~~f~~~~t~~~~vG~~lV~~s~~l  204 (237)
                      .-+|..-...++++-..+|+++++|+++++++.|.++++.++|+
T Consensus        62 ~QLKi~QEvitL~vF~~Fsv~~l~E~l~~n~l~af~~i~~av~f  105 (108)
T PF04342_consen   62 AQLKIIQEVITLVVFAPFSVFYLGEPLKWNYLWAFLCILGAVYF  105 (108)
T ss_pred             HHHHHHHHHHhhheeHHHHHHHhCCCccHHHHHHHHHHHHhhhe
Confidence            34566666666777778889999999999999999999998875

>PF10639 UPF0546: Uncharacterised protein family UPF0546; InterPro: IPR018908 This family of proteins has no known function

Probab=86.85  E-value=0.64  Score=35.21  Aligned_cols=32  Identities=19%  Similarity=0.382  Sum_probs=29.6

Q ss_pred             HHHHHHHHHhcCCCCHHHHHHHHHHHHHHhhh
Q 026565           13 FSLKFSRLFLRRRLSTLQWMAIVLLAVGTTTS   44 (237)
Q Consensus        13 ~tall~~~~L~~~ls~~qw~al~ll~~Gv~l~   44 (237)
                      ||++.++++.+|..+++.|..+.+.+.|+.++
T Consensus        81 fT~l~g~~lge~~~~~~~~~G~~Li~~Gv~Lc  112 (113)
T PF10639_consen   81 FTALTGWLLGEEVISRRTWLGMALILAGVALC  112 (113)
T ss_pred             HHHHHHHHhcCcccchhHHHHHHHHHcCeeee
Confidence            99999999999999999999999999999775

Many members are annotated as potential transmembrane proteins.

>PF06379 RhaT: L-rhamnose-proton symport protein (RhaT); InterPro: IPR004673 These proteins are members of the L-Rhamnose Symporter (RhaT) family

Probab=85.65  E-value=16  Score=32.94  Aligned_cols=138  Identities=14%  Similarity=0.209  Sum_probs=75.1

Q ss_pred             cchhHHHHHHHHHHHHHHHHHHHHHHhhcCCchhHHHHHHHH--HHHHHHHHHH---HHhhccccccccCcccccccccc
Q 026565           60 APIQGYLLGVLSACLSALAGVYTEFLMKKNNDSLYWQNVQLY--TFGAIFNMFR---LLLDDFRGGFEKGPWWQRLFDGY  134 (237)
Q Consensus        60 ~~~~G~~~~l~~a~~sa~a~vy~E~~~K~~~~~~~~~n~~L~--~~~~~~~~~~---~~~~~~~~~~~~g~~~~~~~~g~  134 (237)
                      .-+.|+++-.+++++++.-.+=.+|+ |+=+   | |+.++-  +++.++....   ....|..++.+          ..
T Consensus         4 ~ii~Gii~h~iGg~~~~sfy~P~kkv-k~Ws---W-Es~Wlv~gi~swli~P~~~a~l~ip~~~~i~~----------~~   68 (344)
T PF06379_consen    4 AIILGIIFHAIGGFASGSFYVPFKKV-KGWS---W-ESYWLVQGIFSWLIVPWLWALLAIPDFFSIYS----------AT   68 (344)
T ss_pred             hHHHHHHHHHHHHHHhhhhccchhhc-CCcc---H-HHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHH----------hC
Confidence            35789999999998877766654443 2221   3 455443  3333322221   12233332222          12


Q ss_pred             chH-HHHHH---HHHHHhhhhhhhhhhhhhHHH-HHHHHHHHHHHHHHHHHHHcC-------CCccHHHHHHHHHHHHHh
Q 026565          135 NIT-TWMVV---FNLGSTGLLVSWLMKYADNII-KVYSTSMAMLLTMVLSVYLFN-------FKPTLQLFLGIIICMMSL  202 (237)
Q Consensus       135 ~~~-~~~~i---l~~a~~Gl~va~vlk~~d~i~-k~~a~s~siv~s~lls~~~f~-------~~~t~~~~vG~~lV~~s~  202 (237)
                      +.. .+...   +.=.++|+.-+.-+||.+-.+ .+.+.-++.++..++.-++.|       .+-....++|.+++++|+
T Consensus        69 ~~~~l~~~~l~G~lWGIGgltfGl~mryLGvSLG~sI~lGl~~~~GTlippi~~g~~~~l~~~~~g~~vL~Gv~v~LiGI  148 (344)
T PF06379_consen   69 PASTLFWTFLFGVLWGIGGLTFGLAMRYLGVSLGQSIALGLCAVFGTLIPPIFQGTFDELLATPSGQIVLLGVAVCLIGI  148 (344)
T ss_pred             ChhHHHHHHHHHHHHhcchhhHhHHHHHHhHHHHHHHHHHHHHHHhhchHHHHcCcccccccCCCchhhhhHHHHHHHHH
Confidence            211 11111   122346788888889884332 344444555666666544432       333456899999999999


Q ss_pred             HhccCCCCCC
Q 026565          203 HMYFAPPGML  212 (237)
Q Consensus       203 ~lY~~~~~~~  212 (237)
                      .+-...-.++
T Consensus       149 ai~g~AG~~K  158 (344)
T PF06379_consen  149 AICGKAGSMK  158 (344)
T ss_pred             HHHhHHHHhh
Confidence            9888764433

This family includes two characterised members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.; GO: 0015153 rhamnose transmembrane transporter activity, 0008645 hexose transport, 0016021 integral to membrane

>COG2962 RarD Predicted permeases [General function prediction only]

Probab=84.12  E-value=29  Score=30.62  Aligned_cols=133  Identities=15%  Similarity=0.192  Sum_probs=72.8

Q ss_pred             chhHHHHHHHHHHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHHHHh-hccccccccCccccccccccchHHH
Q 026565           61 PIQGYLLGVLSACLSALAGVYTEFLMKKNNDSLYWQNVQLYTFGAIFNMFRLLL-DDFRGGFEKGPWWQRLFDGYNITTW  139 (237)
Q Consensus        61 ~~~G~~~~l~~a~~sa~a~vy~E~~~K~~~~~~~~~n~~L~~~~~~~~~~~~~~-~~~~~~~~~g~~~~~~~~g~~~~~~  139 (237)
                      ...|+++.+.+.+++|+.-.|..-+-+-...++....+   ++++++.++.... ..++...+.         .-++..+
T Consensus         5 ~~~Gil~~l~Ay~lwG~lp~y~kll~~~~~~eIlahRv---iwS~~~~l~ll~~~r~~~~~~~~---------~~~p~~~   72 (293)
T COG2962           5 SRKGILLALLAYLLWGLLPLYFKLLEPLPATEILAHRV---IWSFPFMLALLFLLRQWRELKQL---------LKQPKTL   72 (293)
T ss_pred             ccchhHHHHHHHHHHHHHHHHHHHHccCCHHHHHHHHH---HHHHHHHHHHHHHHhhhHHHHHH---------HhCcHHH
Confidence            45699999999999999999966654333322221121   3455554443322 222222110         0122222


Q ss_pred             HHH-HHHHHhhh---hhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHcCCCccHHHHHHHHHHHHHhHhc
Q 026565          140 MVV-FNLGSTGL---LVSWLMKYADNIIKVYSTSMAMLLTMVLSVYLFNFKPTLQLFLGIIICMMSLHMY  205 (237)
Q Consensus       140 ~~i-l~~a~~Gl---~va~vlk~~d~i~k~~a~s~siv~s~lls~~~f~~~~t~~~~vG~~lV~~s~~lY  205 (237)
                      ... +.....++   +--...++...+=.+..=...+.++++++.++|+|+++...++...+..+|+..-
T Consensus        73 ~~~~l~a~li~~nW~lfiWAvn~g~~leaSLGY~InPL~~VllG~lflkErls~~Q~iAV~lA~~GV~~~  142 (293)
T COG2962          73 LMLALTALLIGLNWWLFIWAVNNGHVLEASLGYFINPLVNVLLGRLFLKERLSRLQWIAVGLAAAGVLIQ  142 (293)
T ss_pred             HHHHHHHHHHHHHHHHhheecCCCchhHHHhHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHH
Confidence            211 12111111   0011122222222334445667899999999999999999999999988887643

>KOG1580 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=83.52  E-value=1.8  Score=37.13  Aligned_cols=32  Identities=31%  Similarity=0.514  Sum_probs=29.6

Q ss_pred             HHHHHHHHHhcCCCCHHHHHHHHHHHHHHhhh
Q 026565           13 FSLKFSRLFLRRRLSTLQWMAIVLLAVGTTTS   44 (237)
Q Consensus        13 ~tall~~~~L~~~ls~~qw~al~ll~~Gv~l~   44 (237)
                      ||-+.+.++++.+++.+||++-++.+.|...=
T Consensus       280 FTil~SVllf~npls~rQwlgtvlVF~aL~~D  311 (337)
T KOG1580|consen  280 FTILISVLLFNNPLSGRQWLGTVLVFSALTAD  311 (337)
T ss_pred             HHHHHHHHHhcCcCcHHHHHHHHHHHHHhhhH
Confidence            99999999999999999999999999887653

>COG3169 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=83.48  E-value=5.7  Score=29.30  Aligned_cols=44  Identities=7%  Similarity=0.190  Sum_probs=35.0

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHcCCCccHHHHHHHHHHHHHhHhc
Q 026565          162 IIKVYSTSMAMLLTMVLSVYLFNFKPTLQLFLGIIICMMSLHMY  205 (237)
Q Consensus       162 i~k~~a~s~siv~s~lls~~~f~~~~t~~~~vG~~lV~~s~~lY  205 (237)
                      -+|..-.-.+..+-..+|+++++||+.++.+.|..++..++++-
T Consensus        70 QLK~mQEVItL~iFv~Fsvfyl~epl~~~~l~a~~~i~gav~fi  113 (116)
T COG3169          70 QLKTMQEVITLAIFVPFSVFYLKEPLRWNYLWAFLLILGAVYFI  113 (116)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHcCcchHHHHHHHHHHHHHHHHh
Confidence            44555445555667788999999999999999999999998764

>COG3238 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=83.13  E-value=22  Score=28.34  Aligned_cols=136  Identities=13%  Similarity=0.194  Sum_probs=67.2

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHHHHhhccccccccCccccccccccchHHHHHH
Q 026565           63 QGYLLGVLSACLSALAGVYTEFLMKKNNDSLYWQNVQLYTFGAIFNMFRLLLDDFRGGFEKGPWWQRLFDGYNITTWMVV  142 (237)
Q Consensus        63 ~G~~~~l~~a~~sa~a~vy~E~~~K~~~~~~~~~n~~L~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~i  142 (237)
                      +.++..+++..+..+.+..|-++-|.-+.++.. ...=+..|+....+.....+.....       ....+-++|.|.  
T Consensus         5 l~ll~~i~aG~~l~~Q~~iN~qL~~~~~spl~A-s~isf~vGt~~L~~l~l~~~~~~~~-------a~~~~~pwW~~~--   74 (150)
T COG3238           5 LYLLFAILAGALLPLQAAINGRLARYLGSPLLA-SLISFLVGTVLLLILLLIKQGHPGL-------AAVASAPWWAWI--   74 (150)
T ss_pred             HHHHHHHHHhhhhhhHHHHHHHHHHHcCChHHH-HHHHHHHHHHHHHHHHHHhcCCCch-------hhccCCchHHHH--
Confidence            455667777788888888888887776544321 2222233433333333332221100       011112223322  


Q ss_pred             HHHHHhhhhhhhhh----hhhhHHHHHHHHHHHHHHHHHHHHH-HcC---CCccHHHHHHHHHHHHHhHhccCCC
Q 026565          143 FNLGSTGLLVSWLM----KYADNIIKVYSTSMAMLLTMVLSVY-LFN---FKPTLQLFLGIIICMMSLHMYFAPP  209 (237)
Q Consensus       143 l~~a~~Gl~va~vl----k~~d~i~k~~a~s~siv~s~lls~~-~f~---~~~t~~~~vG~~lV~~s~~lY~~~~  209 (237)
                       ...+|.+.+..-+    |..-..+-....+-.++.+.+++.+ +||   .++++..++|.++++.|+++-....
T Consensus        75 -GG~lGa~~vt~s~~l~p~lGa~~t~~l~i~gQli~glliD~fG~~g~~~~~~~~~r~lgi~L~l~gil~~~~~~  148 (150)
T COG3238          75 -GGLLGAIFVTSSILLAPRLGAATTIALVIAGQLIMGLLIDHFGWFGVPKRPLNLPRILGILLVLAGILLARRFG  148 (150)
T ss_pred             -ccchhhhhhhhhHHhccchhHHHHHHHHHHHHHHHHHHHHhhcccCCCcCCCCHHHHHHHHHHHHHHHHhcccc
Confidence             2222322222222    1111111122222224456666655 444   6699999999999999977765443

>KOG2922 consensus Uncharacterized conserved protein [Function unknown]

Probab=82.74  E-value=0.73  Score=41.04  Aligned_cols=74  Identities=12%  Similarity=0.254  Sum_probs=52.6

Q ss_pred             HHHHHHHHHHHhhhhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHcCCCccHHHHHHHHHHHHHhHhc-cCCCC
Q 026565          137 TTWMVVFNLGSTGLLVSWLMKYADNIIKVYSTSMAMLLTMVLSVYLFNFKPTLQLFLGIIICMMSLHMY-FAPPG  210 (237)
Q Consensus       137 ~~~~~il~~a~~Gl~va~vlk~~d~i~k~~a~s~siv~s~lls~~~f~~~~t~~~~vG~~lV~~s~~lY-~~~~~  210 (237)
                      +.|.=++.-.+|-+.-=..+-++..++-+.--+++++.+++++..+++|.+++.-.+|..+++.|.++- ...|+
T Consensus        66 ~Ww~G~ltm~vGei~NFaAYaFAPasLVtPLGAlsvi~saila~~~L~Ekl~~~g~lGc~l~v~Gst~iV~haP~  140 (335)
T KOG2922|consen   66 LWWAGMLTMIVGEIANFAAYAFAPASLVTPLGALSVIISAILASFFLKEKLNLLGILGCVLCVVGSTTIVIHAPK  140 (335)
T ss_pred             HHHHHHHHHHHHhHhhHHHHhhchHhhhccchhHHHHHHHHHHHHHHHHHHHHhhhhheeEEecccEEEEEecCc
Confidence            334333333444333334445567777777788999999999999999999999999999999877554 33444

>KOG1581 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=82.46  E-value=36  Score=30.39  Aligned_cols=73  Identities=12%  Similarity=0.159  Sum_probs=63.0

Q ss_pred             HHHHHHHHhhhhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHcCCCccHHHHHHHHHHHHHhHhccCCCCCC
Q 026565          140 MVVFNLGSTGLLVSWLMKYADNIIKVYSTSMAMLLTMVLSVYLFNFKPTLQLFLGIIICMMSLHMYFAPPGML  212 (237)
Q Consensus       140 ~~il~~a~~Gl~va~vlk~~d~i~k~~a~s~siv~s~lls~~~f~~~~t~~~~vG~~lV~~s~~lY~~~~~~~  212 (237)
                      .+-+.|.+++-+---.+||.+=-+...+-+..++-..+...+..+.+.++..++-+++|-.|+-++...+++.
T Consensus        88 ~is~tn~~s~~~~yeaLKyvSyPtq~LaKscKmIPVmlmg~Lvy~~ky~~~eYl~~~LIs~GvsiF~l~~~s~  160 (327)
T KOG1581|consen   88 LISFTNTLSSWCGYEALKYVSYPTQTLAKSCKMIPVMLMGTLVYGRKYSSFEYLVAFLISLGVSIFSLFPNSD  160 (327)
T ss_pred             HHHHHhhcchHHHHHHHHhccchHHHHHHHhhhhHHHHHHHHHhcCccCcHHHHHHHHHHhheeeEEEecCCC
Confidence            4446777777777788999998888999999999999999999999999999999999999998888876643

>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function

Probab=81.82  E-value=16  Score=31.66  Aligned_cols=26  Identities=15%  Similarity=0.401  Sum_probs=20.1

Q ss_pred             HcCCC-----ccHHHHHHHHHHHHHhHhccC
Q 026565          182 LFNFK-----PTLQLFLGIIICMMSLHMYFA  207 (237)
Q Consensus       182 ~f~~~-----~t~~~~vG~~lV~~s~~lY~~  207 (237)
                      +||.+     -.+.-++|.+++++|..+|..
T Consensus       104 lFg~~~~~~~~~~Ln~~G~~l~~~~~~~f~f  134 (254)
T PF07857_consen  104 LFGLDPQVPSSPWLNYIGVALVLVSGIIFSF  134 (254)
T ss_pred             eccccccccchhHHHHHHHHHHHHHHHheee
Confidence            67644     345578999999999999966

The region concerned is approximately 280 residues long.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	237
2i68_A	137	Protein EMRE; transmembrane protein, small-multidr	97.99
3b5d_A	110	Multidrug transporter EMRE; helical membrane prote	97.6
3b5d_A	110	Multidrug transporter EMRE; helical membrane prote	96.49
2i68_A	137	Protein EMRE; transmembrane protein, small-multidr	96.12

>2i68_A Protein EMRE; transmembrane protein, small-multidrug resistance, transporter, homodimer, dual topology, transport protein; NMR {Escherichia coli}

Probab=97.99  E-value=7.4e-06  Score=63.22  Aligned_cols=66  Identities=14%  Similarity=0.163  Sum_probs=43.1

Q ss_pred             HHHHhhhhhhhhhhhhhHHHHHHH-HHHHHHHHHHHHHHHcCCCccHHHHHHHHHHHHHhHhccCCC
Q 026565          144 NLGSTGLLVSWLMKYADNIIKVYS-TSMAMLLTMVLSVYLFNFKPTLQLFLGIIICMMSLHMYFAPP  209 (237)
Q Consensus       144 ~~a~~Gl~va~vlk~~d~i~k~~a-~s~siv~s~lls~~~f~~~~t~~~~vG~~lV~~s~~lY~~~~  209 (237)
                      ..++...+....+|+.+....... ..+.++++.++++++|||++|+..++|.++|+.|+++.+..+
T Consensus        39 ~~~ls~~l~~~alk~i~~s~ay~iw~~l~pv~~~l~g~l~lgE~ls~~~~~Gi~LIi~GV~ll~~~~  105 (137)
T 2i68_A           39 CYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLIINLLS  105 (137)
T ss_dssp             HHHHHHHHHHHHHC-----CHHHHHHHHHHHHHHHHHHHHHC------CHHHHHHHHHHHHHHHHC-
T ss_pred             HHHHHHHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcCC
Confidence            334444556667787766544444 789999999999999999999999999999999999987654

>3b5d_A Multidrug transporter EMRE; helical membrane protein, multidrug resistance transporter, SMR, antiport, inner membrane, transmembrane; HET: P4P; 3.80A {Escherichia coli K12} PDB: 3b61_A 3b62_A*

Probab=97.60  E-value=0.00044  Score=51.04  Aligned_cols=64  Identities=14%  Similarity=0.177  Sum_probs=51.1

Q ss_pred             HHhhhhhhhhhhhhhHHHHHHH-HHHHHHHHHHHHHHHcCCCccHHHHHHHHHHHHHhHhccCCC
Q 026565          146 GSTGLLVSWLMKYADNIIKVYS-TSMAMLLTMVLSVYLFNFKPTLQLFLGIIICMMSLHMYFAPP  209 (237)
Q Consensus       146 a~~Gl~va~vlk~~d~i~k~~a-~s~siv~s~lls~~~f~~~~t~~~~vG~~lV~~s~~lY~~~~  209 (237)
                      .+...+....+|+.|-...... ..++++++.++++++|||++|+..++|..+++.|+++-+..+
T Consensus        41 ~~~~~~~~~al~~~p~s~ay~i~~g~~~v~~~l~~~~~~~E~~s~~~~~Gi~lIi~Gv~~l~~~~  105 (110)
T 3b5d_A           41 CASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLIINLLS  105 (110)
T ss_pred             HHHHHHHHHHHHhCChhhHHHHHhhHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcCC
Confidence            3334455667787765554333 688999999999999999999999999999999999887654

>3b5d_A Multidrug transporter EMRE; helical membrane protein, multidrug resistance transporter, SMR, antiport, inner membrane, transmembrane; HET: P4P; 3.80A {Escherichia coli K12} PDB: 3b61_A 3b62_A*

Probab=96.49  E-value=0.0043  Score=45.60  Aligned_cols=36  Identities=17%  Similarity=0.238  Sum_probs=33.5

Q ss_pred             HHHHHHHHHhcCCCCHHHHHHHHHHHHHHhhhcccC
Q 026565           13 FSLKFSRLFLRRRLSTLQWMAIVLLAVGTTTSQVKG   48 (237)
Q Consensus        13 ~tall~~~~L~~~ls~~qw~al~ll~~Gv~l~~~~~   48 (237)
                      ++++++++++||++++.||.++.++.+|+......+
T Consensus        70 ~~~l~~~~~~~E~~s~~~~~Gi~lIi~Gv~~l~~~~  105 (110)
T 3b5d_A           70 LISLLSWGFFGQRLDLPAIIGMMLICAGVLIINLLS  105 (110)
T ss_pred             HHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcCC
Confidence            889999999999999999999999999999987654

>2i68_A Protein EMRE; transmembrane protein, small-multidrug resistance, transporter, homodimer, dual topology, transport protein; NMR {Escherichia coli}

Probab=96.12  E-value=0.0035  Score=48.10  Aligned_cols=38  Identities=16%  Similarity=0.204  Sum_probs=28.0

Q ss_pred             hHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhhhcccC
Q 026565           10 PFHFSLKFSRLFLRRRLSTLQWMAIVLLAVGTTTSQVKG   48 (237)
Q Consensus        10 p~~~tall~~~~L~~~ls~~qw~al~ll~~Gv~l~~~~~   48 (237)
                      |+ +++++++++++|++++.||++++++.+|+.+.+..+
T Consensus        68 pv-~~~l~g~l~lgE~ls~~~~~Gi~LIi~GV~ll~~~~  105 (137)
T 2i68_A           68 IV-LISLLSWGFFGQRLDLPAIIGMMLICAGVLIINLLS  105 (137)
T ss_dssp             HH-HHHHHHHHHHC------CHHHHHHHHHHHHHHHHC-
T ss_pred             HH-HHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcCC
Confidence            44 899999999999999999999999999999987654

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00