Citrus Sinensis ID: 026722
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 234 | ||||||
| 225431745 | 233 | PREDICTED: bidirectional sugar transport | 0.987 | 0.991 | 0.739 | 3e-92 | |
| 224130420 | 238 | predicted protein [Populus trichocarpa] | 0.995 | 0.978 | 0.777 | 9e-91 | |
| 255551797 | 244 | conserved hypothetical protein [Ricinus | 0.974 | 0.934 | 0.759 | 4e-90 | |
| 359807170 | 245 | uncharacterized protein LOC100776607 [Gl | 0.978 | 0.934 | 0.715 | 2e-83 | |
| 217072846 | 246 | unknown [Medicago truncatula] gi|3885230 | 0.995 | 0.947 | 0.700 | 3e-82 | |
| 27754697 | 241 | putative cytochrome c oxidoreductase [Ar | 0.970 | 0.941 | 0.660 | 3e-80 | |
| 322967649 | 241 | RecName: Full=Bidirectional sugar transp | 0.970 | 0.941 | 0.660 | 3e-79 | |
| 240255890 | 241 | nodulin MtN3-like protein [Arabidopsis t | 0.970 | 0.941 | 0.660 | 3e-79 | |
| 297800580 | 241 | hypothetical protein ARALYDRAFT_493293 [ | 0.970 | 0.941 | 0.643 | 1e-78 | |
| 224123068 | 238 | predicted protein [Populus trichocarpa] | 0.948 | 0.932 | 0.651 | 3e-78 |
| >gi|225431745|ref|XP_002269234.1| PREDICTED: bidirectional sugar transporter SWEET17 [Vitis vinifera] gi|296083357|emb|CBI22993.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
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Score = 343 bits (880), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 173/234 (73%), Positives = 200/234 (85%), Gaps = 3/234 (1%)
Query: 1 MKDLSFYVGVIGNIISVLMFLAPVRTFWRIIKHRSTEEFQSLPYICTLLNSSLWTYYGIT 60
M+ LSF+ GVIGNIISVL+FLAP+ TFWRI+KHRST++F+SLPY+CTLLNSSLWTYYGI
Sbjct: 1 MESLSFFAGVIGNIISVLVFLAPIGTFWRIVKHRSTQDFESLPYVCTLLNSSLWTYYGII 60
Query: 61 RPGSYLVATVNGFGILVEAVYVTLFFIYAPTKAMRAKTAIIFGILDVGFLGAAIAATRLA 120
+PG LVATVNGFG++VEA YVTLF IYAP K MRAKT + +LDVGFL AAI TRLA
Sbjct: 61 KPGEILVATVNGFGVVVEAAYVTLFLIYAPAK-MRAKTVALVSLLDVGFLAAAILVTRLA 119
Query: 121 LEGEARIDAIGFMCAGLNIIMYASPLSAMKTVVTTKSVEFMPFMLSFFFFLNGGIWAFYA 180
L+G+ RIDA+GF+C+GLNI+MY SPL+AMKTVVTTKSVEFMPF LSFF FLNGGIW YA
Sbjct: 120 LQGDTRIDALGFICSGLNIVMYGSPLAAMKTVVTTKSVEFMPFFLSFFLFLNGGIWTIYA 179
Query: 181 LLVRDIFLGVPNGTGFLLGTAQLVLYAIYRNAKPSKNAANSMEEGAQHEPLIIS 234
+LVRD FL VPNGTG +LGTAQLVLYAIYRN+KPS S+E+G+Q E LI S
Sbjct: 180 VLVRDYFLAVPNGTGLVLGTAQLVLYAIYRNSKPSNKF--SIEDGSQEEHLIAS 231
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224130420|ref|XP_002328604.1| predicted protein [Populus trichocarpa] gi|222838586|gb|EEE76951.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
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| >gi|255551797|ref|XP_002516944.1| conserved hypothetical protein [Ricinus communis] gi|223544032|gb|EEF45558.1| conserved hypothetical protein [Ricinus communis] | Back alignment and taxonomy information |
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| >gi|359807170|ref|NP_001241100.1| uncharacterized protein LOC100776607 [Glycine max] gi|255646128|gb|ACU23550.1| unknown [Glycine max] | Back alignment and taxonomy information |
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| >gi|217072846|gb|ACJ84783.1| unknown [Medicago truncatula] gi|388523097|gb|AFK49610.1| unknown [Medicago truncatula] | Back alignment and taxonomy information |
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| >gi|27754697|gb|AAO22792.1| putative cytochrome c oxidoreductase [Arabidopsis thaliana] | Back alignment and taxonomy information |
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| >gi|322967649|sp|Q84WN3.2|SWT17_ARATH RecName: Full=Bidirectional sugar transporter SWEET17; Short=AtSWEET17 | Back alignment and taxonomy information |
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| >gi|240255890|ref|NP_193327.5| nodulin MtN3-like protein [Arabidopsis thaliana] gi|332658266|gb|AEE83666.1| nodulin MtN3-like protein [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
| >gi|297800580|ref|XP_002868174.1| hypothetical protein ARALYDRAFT_493293 [Arabidopsis lyrata subsp. lyrata] gi|297314010|gb|EFH44433.1| hypothetical protein ARALYDRAFT_493293 [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
|---|
| >gi|224123068|ref|XP_002318986.1| predicted protein [Populus trichocarpa] gi|222857362|gb|EEE94909.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 234 | ||||||
| TAIR|locus:2089363 | 230 | SWEET16 [Arabidopsis thaliana | 0.905 | 0.921 | 0.592 | 5.4e-63 | |
| UNIPROTKB|Q10LN5 | 328 | SWEET16 "Bidirectional sugar t | 0.952 | 0.679 | 0.48 | 6.8e-56 | |
| UNIPROTKB|A2WSD8 | 259 | SWEET6A "Bidirectional sugar t | 0.914 | 0.826 | 0.445 | 4.5e-43 | |
| UNIPROTKB|Q8LR09 | 259 | SWEET6A "Bidirectional sugar t | 0.914 | 0.826 | 0.445 | 4.5e-43 | |
| UNIPROTKB|A2X5B4 | 319 | SWEET15 "Bidirectional sugar t | 0.923 | 0.677 | 0.373 | 7.3e-43 | |
| UNIPROTKB|Q6K602 | 319 | SWEET15 "Bidirectional sugar t | 0.923 | 0.677 | 0.373 | 7.3e-43 | |
| UNIPROTKB|P93332 | 268 | N3 "Bidirectional sugar transp | 0.952 | 0.832 | 0.396 | 1.9e-42 | |
| UNIPROTKB|Q9FPN0 | 265 | NEC1 "Bidirectional sugar tran | 0.893 | 0.788 | 0.388 | 4e-42 | |
| UNIPROTKB|A2YZ24 | 266 | SWEET7B "Bidirectional sugar t | 0.901 | 0.793 | 0.425 | 5.2e-42 | |
| UNIPROTKB|Q8RZQ8 | 273 | SWEET1A "Bidirectional sugar t | 0.948 | 0.813 | 0.442 | 5.2e-42 |
| TAIR|locus:2089363 SWEET16 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 643 (231.4 bits), Expect = 5.4e-63, P = 5.4e-63
Identities = 128/216 (59%), Positives = 158/216 (73%)
Query: 1 MKDLSFYVGVIGNIISVLMFLAPVRTFWRIIKHRSTEEFQSLPYICTLLNSSLWTYYGIT 60
M DLSFYVGVIGN+ISVL+FL+PV TFWRI++ RSTEE++ PYICTL++SSLWTYYGI
Sbjct: 1 MADLSFYVGVIGNVISVLVFLSPVETFWRIVQRRSTEEYECFPYICTLMSSSLWTYYGIV 60
Query: 61 RPGSYLVATVNGFGILVEAVYVTLFFIYAPTKAMRAKTAIIFGILDVGFLGAAIAATRLA 120
PG YLV+TVNGFG L E++YV +F + P K+ KT ++ L+V F AIA TR
Sbjct: 61 TPGEYLVSTVNGFGALAESIYVLIFLFFVP-KSRFLKTVVVVLALNVCFPVIAIAGTR-T 118
Query: 121 LEGEA--RIDAIGFMCAGLNIIMYASPLSAMKTVVTTKSVEXXXXXXXXXXXXNGGIWAF 178
L G+A R ++GF+CA LNIIMY SPLSA+KTVVTT+SV+ NG IW
Sbjct: 119 LFGDANSRSSSMGFICATLNIIMYGSPLSAIKTVVTTRSVQFMPFWLSFFLFLNGAIWGV 178
Query: 179 YALLVRDIFLGVPNGTGFLLGTAQLVLYAIYRNAKP 214
YALL+ D+FL VPNG GF LG QL++YA YRNA+P
Sbjct: 179 YALLLHDMFLLVPNGMGFFLGIMQLLIYAYYRNAEP 214
|
|
| UNIPROTKB|Q10LN5 SWEET16 "Bidirectional sugar transporter SWEET16" [Oryza sativa Japonica Group (taxid:39947)] | Back alignment and assigned GO terms |
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| UNIPROTKB|A2WSD8 SWEET6A "Bidirectional sugar transporter SWEET6a" [Oryza sativa Indica Group (taxid:39946)] | Back alignment and assigned GO terms |
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| UNIPROTKB|Q8LR09 SWEET6A "Bidirectional sugar transporter SWEET6a" [Oryza sativa Japonica Group (taxid:39947)] | Back alignment and assigned GO terms |
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| UNIPROTKB|A2X5B4 SWEET15 "Bidirectional sugar transporter SWEET15" [Oryza sativa Indica Group (taxid:39946)] | Back alignment and assigned GO terms |
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| UNIPROTKB|Q6K602 SWEET15 "Bidirectional sugar transporter SWEET15" [Oryza sativa Japonica Group (taxid:39947)] | Back alignment and assigned GO terms |
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| UNIPROTKB|P93332 N3 "Bidirectional sugar transporter N3" [Medicago truncatula (taxid:3880)] | Back alignment and assigned GO terms |
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| UNIPROTKB|Q9FPN0 NEC1 "Bidirectional sugar transporter NEC1" [Petunia x hybrida (taxid:4102)] | Back alignment and assigned GO terms |
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| UNIPROTKB|A2YZ24 SWEET7B "Bidirectional sugar transporter SWEET7b" [Oryza sativa Indica Group (taxid:39946)] | Back alignment and assigned GO terms |
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| UNIPROTKB|Q8RZQ8 SWEET1A "Bidirectional sugar transporter SWEET1a" [Oryza sativa Japonica Group (taxid:39947)] | Back alignment and assigned GO terms |
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Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
| GSVIVG00033013001 | SubName- Full=Chromosome chr5 scaffold_64, whole genome shotgun sequence; (233 aa) | |||||||
(Vitis vinifera) | ||||||||
| Sorry, there are no predicted associations at the current settings. |
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 234 | |||
| pfam03083 | 87 | pfam03083, MtN3_slv, Sugar efflux transporter for | 3e-25 | |
| pfam03083 | 87 | pfam03083, MtN3_slv, Sugar efflux transporter for | 2e-22 |
| >gnl|CDD|202529 pfam03083, MtN3_slv, Sugar efflux transporter for intercellular exchange | Back alignment and domain information |
|---|
Score = 94.6 bits (236), Expect = 3e-25
Identities = 32/88 (36%), Positives = 54/88 (61%), Gaps = 1/88 (1%)
Query: 6 FYVGVIGNIISVLMFLAPVRTFWRIIKHRSTEEFQSLPYICTLLNSSLWTYYGITRPGSY 65
F +G++ + SV +FL+P+ ++IK +S E LP++ LL++SLW YG+ + Y
Sbjct: 1 FLLGLLCVVFSVAVFLSPLSILRKVIKTKSVEGMPFLPFLAGLLSASLWLLYGLLKKDGY 60
Query: 66 LVATVNGFGILVEAVYVTLFFIYAPTKA 93
++ NG G ++ +Y+ LF IY P KA
Sbjct: 61 II-IPNGVGCVLGTIYLILFIIYPPKKA 87
|
This family includes proteins such as drosophila saliva, MtN3 involved in root nodule development and a protein involved in activation and expression of recombination activation genes (RAGs). Although the molecular function of these proteins is unknown, they are almost certainly transmembrane proteins. This family contains a region of two transmembrane helices that is found in two copies in most members of the family. This family also contains specific sugar efflux transporters that are essential for the maintenance of animal blood glucose levels, plant nectar production, and plant seed and pollen development. In many organisims it meditaes gluose transport; in Arabidopsis it is necessary for pollen viability; and two of the rice homologues are specifically exploited by bacterial pathogens for virulence by means of direct binding of a bacterial effector to the SWEET promoter. Length = 87 |
| >gnl|CDD|202529 pfam03083, MtN3_slv, Sugar efflux transporter for intercellular exchange | Back alignment and domain information |
|---|
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 234 | |||
| KOG1623 | 243 | consensus Multitransmembrane protein [General func | 100.0 | |
| PF03083 | 87 | MtN3_slv: Sugar efflux transporter for intercellul | 99.86 | |
| PF03083 | 87 | MtN3_slv: Sugar efflux transporter for intercellul | 99.86 | |
| KOG1623 | 243 | consensus Multitransmembrane protein [General func | 99.48 | |
| COG4095 | 89 | Uncharacterized conserved protein [Function unknow | 99.39 | |
| COG4095 | 89 | Uncharacterized conserved protein [Function unknow | 99.37 | |
| TIGR00951 | 220 | 2A43 Lysosomal Cystine Transporter. | 98.74 | |
| PF04193 | 61 | PQ-loop: PQ loop repeat | 98.16 | |
| PF04193 | 61 | PQ-loop: PQ loop repeat | 98.16 | |
| KOG3211 | 230 | consensus Predicted endoplasmic reticulum membrane | 97.72 | |
| KOG2913 | 260 | consensus Predicted membrane protein [Function unk | 96.73 | |
| TIGR00951 | 220 | 2A43 Lysosomal Cystine Transporter. | 96.55 | |
| PRK01021 | 608 | lpxB lipid-A-disaccharide synthase; Reviewed | 96.18 | |
| PHA02246 | 192 | hypothetical protein | 95.36 | |
| PF03650 | 119 | MPC: Uncharacterised protein family (UPF0041); Int | 95.36 | |
| smart00679 | 32 | CTNS Repeated motif present between transmembrane | 94.52 | |
| PF10688 | 163 | Imp-YgjV: Bacterial inner membrane protein; InterP | 94.5 | |
| smart00679 | 32 | CTNS Repeated motif present between transmembrane | 93.09 | |
| KOG1589 | 118 | consensus Uncharacterized conserved protein [Funct | 92.75 | |
| PHA02246 | 192 | hypothetical protein | 89.57 | |
| KOG2913 | 260 | consensus Predicted membrane protein [Function unk | 88.66 | |
| PF03650 | 119 | MPC: Uncharacterised protein family (UPF0041); Int | 86.65 | |
| KOG1589 | 118 | consensus Uncharacterized conserved protein [Funct | 85.3 | |
| COG3952 | 113 | Predicted membrane protein [Function unknown] | 84.66 | |
| KOG2489 | 592 | consensus Transmembrane protein [General function | 83.4 |
| >KOG1623 consensus Multitransmembrane protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-47 Score=327.47 Aligned_cols=209 Identities=46% Similarity=0.845 Sum_probs=185.3
Q ss_pred hhHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhcCcCCccchhHHHHHHHHHHHHHHhcccCCcceeeeehhhHHHHHHHh
Q 026722 2 KDLSFYVGVIGNIISVLMFLAPVRTFWRIIKHRSTEEFQSLPYICTLLNSSLWTYYGITRPGSYLVATVNGFGILVEAVY 81 (234)
Q Consensus 2 d~~~~~~g~la~i~si~~~lSplp~i~~i~k~kst~~~s~~p~~~~~~n~~lW~~YG~l~~d~~~v~~~N~~G~~l~~~~ 81 (234)
+....++|..|++.+++++++|+|+++||+|+||+|+.|..||+++.+||.+|+.||.+.+|.+.++..|.+|+.++++|
T Consensus 3 ~~~~~l~~i~~~~is~~~fl~pv~tf~~I~KkkS~e~~s~~Pfl~~ll~~~lWl~YG~~~~~d~llitIN~~G~~ie~~Y 82 (243)
T KOG1623|consen 3 NVLLFLFGILGNIISFGVFLSPVPTFRRIRKKKSVEGFSSLPFLMGLLSCSLWLYYGLLKVHDYLLITINGIGLVIETVY 82 (243)
T ss_pred chHHHHHHHHHHHHhHHHhhcCchhHHHhhcccCcCCCCCcCcHHHHHHHHHHHHhhhhccCceEEEEEehhcHHHHHHH
Confidence 46778999999999999999999999999999999999999999999999999999998883367999999999999999
Q ss_pred hhhheeeccchHHHHHHHHHHHHHHHHHHHHHHHHHHhcccc-hhHHHHHHhHHHHHHHHHhhhhhhhhhHHhhCCCccc
Q 026722 82 VTLFFIYAPTKAMRAKTAIIFGILDVGFLGAAIAATRLALEG-EARIDAIGFMCAGLNIIMYASPLSAMKTVVTTKSVEF 160 (234)
Q Consensus 82 ~~v~~~y~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~-~~~~~~~G~~~~~~~i~~~~sPl~~i~~vi~tks~~~ 160 (234)
+..|+.|+++|+ +.+.. ....++.+++...+++...++ +.+.+.+|.+|.+++++||+|||..+|+|+|+||+|+
T Consensus 83 i~~f~~ya~~k~-~~~~~---~~~~~~~~~~~i~~~~~~~~~~~~~~~~lG~vc~~~nI~~~~sPL~~m~~VIktkSvE~ 158 (243)
T KOG1623|consen 83 ISIFLYYAPKKK-TVKIV---LALVLGVIGLIILLTLLLFHDPERRVSVLGIVCAVFNISMFAAPLSVIRKVIKTKSVEY 158 (243)
T ss_pred HHHHheecCchh-eeEee---ehHHHHHHHHHHHHHHHhcCCcceeeeeeehhhhhhhHHhhhccHHhhhhheecCceee
Confidence 999999998877 32211 122233455555556665655 5568999999999999999999999999999999999
Q ss_pred cchHHHHHHHHhHHHHHHHhhhcCCeeeecchhhHHHHHHHHHHhheeecCCCC
Q 026722 161 MPFMLSFFFFLNGGIWAFYALLVRDIFLGVPNGTGFLLGTAQLVLYAIYRNAKP 214 (234)
Q Consensus 161 ~~~~~~~~~~~~~~~W~~YG~~~~d~~v~i~N~~g~~l~~~ql~l~~~y~~~~~ 214 (234)
||++++++.++++..|++||++++|.|+.+||++|..++++|+.+|++||++++
T Consensus 159 mPf~Ls~a~fl~a~~W~lYGlli~D~~IaipN~iG~~l~~~QL~Ly~~y~~~~~ 212 (243)
T KOG1623|consen 159 MPFPLSFALFLVAVQWLLYGLLIKDFFIAIPNVLGFLLGLIQLILYFKYPKTTE 212 (243)
T ss_pred echHHHHHHHHHHHHHHHHHHHhcCeEEEcccHHHHHHHHHHHHHhhhcCCCcc
Confidence 999999999999999999999999999999999999999999999999997653
|
|
| >PF03083 MtN3_slv: Sugar efflux transporter for intercellular exchange; InterPro: IPR004316 This family includes proteins such as Drosophila saliva [], MtN3 involved in root nodule development [] and proteins involved in activation and expression of recombination activation genes (RAGs) [] | Back alignment and domain information |
|---|
| >PF03083 MtN3_slv: Sugar efflux transporter for intercellular exchange; InterPro: IPR004316 This family includes proteins such as Drosophila saliva [], MtN3 involved in root nodule development [] and proteins involved in activation and expression of recombination activation genes (RAGs) [] | Back alignment and domain information |
|---|
| >KOG1623 consensus Multitransmembrane protein [General function prediction only] | Back alignment and domain information |
|---|
| >COG4095 Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
| >COG4095 Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
| >TIGR00951 2A43 Lysosomal Cystine Transporter | Back alignment and domain information |
|---|
| >PF04193 PQ-loop: PQ loop repeat | Back alignment and domain information |
|---|
| >PF04193 PQ-loop: PQ loop repeat | Back alignment and domain information |
|---|
| >KOG3211 consensus Predicted endoplasmic reticulum membrane protein Lec35/MPDU1 involved in monosaccharide-P-dolichol utilization [General function prediction only] | Back alignment and domain information |
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| >KOG2913 consensus Predicted membrane protein [Function unknown] | Back alignment and domain information |
|---|
| >TIGR00951 2A43 Lysosomal Cystine Transporter | Back alignment and domain information |
|---|
| >PRK01021 lpxB lipid-A-disaccharide synthase; Reviewed | Back alignment and domain information |
|---|
| >PHA02246 hypothetical protein | Back alignment and domain information |
|---|
| >PF03650 MPC: Uncharacterised protein family (UPF0041); InterPro: IPR005336 This is a family of proteins of unknown function | Back alignment and domain information |
|---|
| >smart00679 CTNS Repeated motif present between transmembrane helices in cystinosin, yeast ERS1p, mannose-P-dolichol utilization defect 1, and other hypothetical proteins | Back alignment and domain information |
|---|
| >PF10688 Imp-YgjV: Bacterial inner membrane protein; InterPro: IPR019629 This entry represents inner membrane proteins, many are YgjV proteins | Back alignment and domain information |
|---|
| >smart00679 CTNS Repeated motif present between transmembrane helices in cystinosin, yeast ERS1p, mannose-P-dolichol utilization defect 1, and other hypothetical proteins | Back alignment and domain information |
|---|
| >KOG1589 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
| >PHA02246 hypothetical protein | Back alignment and domain information |
|---|
| >KOG2913 consensus Predicted membrane protein [Function unknown] | Back alignment and domain information |
|---|
| >PF03650 MPC: Uncharacterised protein family (UPF0041); InterPro: IPR005336 This is a family of proteins of unknown function | Back alignment and domain information |
|---|
| >KOG1589 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
| >COG3952 Predicted membrane protein [Function unknown] | Back alignment and domain information |
|---|
| >KOG2489 consensus Transmembrane protein [General function prediction only] | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
No homologous structure with e-value below 0.005
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
No hit with e-value below 0.005
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
No hit with probability above 80.00
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
No hit with e-value below 0.005
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
No hit with probability above 80.00