Citrus Sinensis ID: 026754

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230---
Protein Sequence
MEAAMGLMRRMPPKHSETALSALLSLLPDHSSDLLSQVDQPLQVLFDEESGKEFILCEYNRDADSYRSPWSNKYHPPLEDALYPPAELRKLEIEANEVFAIYRDQYYEGGISSVYMWEDDNEGFVACFLIKKDGSKTAQGRRGHLEEGAWDAIHVIEVAPEEEGIARYCLTSTVMLSLTTDHESSGTFSLSGSIRRQVICHLNCYGVMFFETSWRMEFSCRLFSLRINNSCVQ
Secondary Structure (PSIPRED)
cHHHHHHHHccccccHHHHHHHHHccccccHHHHHHcccccEEEEEEcccccEEEEEccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHccccccEEEEEEEcccccEEEEEEEEEccccccccccccccccccccEEEEEEEcccccEEEEEEEEEEEEEEEEccccccEEEEccEEHHccccccccccHHHHHHHHHHHHHHHHHHHHHcccccc
Secondary Structure Prediction (SSPRO)
HHHHHHHHccccHHHHHHHHHHHHHHcHHHHHHHHHHcccccEEEEEccccEEEEEcHHHEEccEEEccccccEEccccccccccHHHHHHHHHHHHHHHHHHHHHHcccEEEEEEEEEccccEEEEEEEEEcccccccccccccccccccEEEEEEEEEccccEEEEEEEEEEEEEEEEEEcccEEEEEEEEEEEEEEHHHHHcccEEEEccEEEEEEEEEEEEEEcccccc
Coil and Loop (DISEMBL)
meaamglmrrmppkhsETALSALLSLlpdhssdllsqvdqplqvlfdeesgkefilceynrdadsyrspwsnkyhppledalyppaelrKLEIEANEVFAIYRDqyyeggissvymweddneGFVACFLIkkdgsktaqgrrghleegawDAIHvievapeeegiaRYCLTSTVMLSLttdhessgtfslsgsIRRQVICHLNCYGVMFFETSWRMEFSCRLFSLRINNSCVQ
Flexible Loop (DISEMBL)
meaamglmrrmppKHSETALSALLSLLPDHSSDLLSQVDQPLQVLFDEESGKEFILCEYNRDADSYRSPWSNKYHPPLEDALYPPAELRKLEIEANEVFAIYRDQYYEGGISSVYMWEDDNEGFVACFLIKKDGSKTAQGRRGHLEEGAWDAIHVIEVAPEEEGIARYCLTSTVMLSLTTDHESSGTFSLSGSIRRQVICHLNCYGVMFFETSWRMEFSCRLFslrinnscvq
Low Complexity Region (SEG)
MEAAMGLMRRMPPKHSETalsallsllpdhssdllsQVDQPLQVLFDEESGKEFILCEYNRDADSYRSPWSNKYHPPLEDALYPPAELRKLEIEANEVFAIYRDQYYEGGISSVYMWEDDNEGFVACFLIKKDGSKTAQGRRGHLEEGAWDAIHVIEVAPEEEGIARYCLTSTVMLSLTTDHESSGTFSLSGSIRRQVICHLNCYGVMFFETSWRMEFSCRLFSLRINNSCVQ
Disordered region (IsUnstruct)
****************************************PLQVLFDEESGKEFILCEYNRDADSYRSPWSNKYHPPLEDALYPPAELRKLEIEANEVFAIYRDQYYEGGISSVYMWEDDNEGFVACFLIKKDG*******RGHLEEGAWDAIHVIEVAPEEEGIARYCLTSTVMLSLTTDHESSGTFSLSGSIRRQVICHLNCYGVMFFETSWRMEFSCRLFSLRINN****
Disordered Region (DISOPRED)
MEAAMGLMRRMPPKHSETALSALLSLLPDHSSDLLSQVDQPLQVLFDEESGKEFILCEYNRDADSYRSPWSNKYHPPLEDALYPPAELRKLEIEANEVFAIYRDQYYEGGISSVYMWEDDNEGFVACFLIKKDG*************GAWDAIHVIEVAPEEEGIARYCLTSTVMLSLT*************SIRRQVICHLNCYGVMFFETSWRMEFSCRLFSLRINNS***
Disordered Region (DISEMBL)
***************SETALSALLSLLPDHSSDLLSQVDQPLQVLFDEESGKEFILCEYNRDADSYRSPWSNKYHPPLEDALYPPAELRKLEIEANEVFAIYRDQYYEGGISSVYMWEDDNEGFVACFLIKKDG*********HLEEGAWDAIHVIEVAPEEEGIARYCLTSTVMLSLTTD*********SGSIRRQVICHLNCYGVMFFETSWRMEFSCRLFSLRINNSCVQ
Disordered Region (DISPRO)
MEAAMGLMRRMPPKHSETALSALLSLLPDHSSDLLSQVDQPLQVLFDEESGKEFILCEYNRDADSYRSPWSNKYHPPLEDALYPPAELRKLEIEANEVFAIYRDQYYEGGISSVYMWEDDNEGFVACFLIKKDGS***********EGAWDAIHVIEVAPEEEGIARYCLTSTVMLSLTTDHESSGTFSLSGSIRRQVICHLNCYGVMFFETSWRMEFSCRLFSLRINNSCV*
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MEAAMGLMRRMPPKHSETALSALLSLLPDHSSDLLSQVDQPLQVLFDEESGKEFILCEYNRDADSYRSPWSNKYHPPLEDALYPPAELRKLEIEANEVFAIYRDQYYEGGISSVYMWEDDNEGFVACFLIKKDGSKTAQGRRGHLEEGAWDAIHVIEVAPEEEGIARYCLTSTVMLSLTTDHESSGTFSLSGSIRRQVICHLNCYGVMFFETSWRMEFSCRLFSLRINNSCVQ
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	233	2.2.26 [Sep-21-2011]
Q9M9G7	256	Probable F-actin-capping	yes	no	0.866	0.789	0.836	2e-96
P13021	272	F-actin-capping protein s	yes	no	0.824	0.705	0.520	8e-56
Q5XI32	272	F-actin-capping protein s	yes	no	0.811	0.694	0.542	2e-55
Q5R507	272	F-actin-capping protein s	yes	no	0.811	0.694	0.542	2e-55
P14315	277	F-actin-capping protein s	no	no	0.811	0.682	0.542	3e-55
P47756	277	F-actin-capping protein s	no	no	0.811	0.682	0.542	3e-55
P79136	301	F-actin-capping protein s	yes	no	0.811	0.627	0.542	3e-55
A0PFK7	277	F-actin-capping protein s	no	no	0.811	0.682	0.542	4e-55
P47757	277	F-actin-capping protein s	no	no	0.811	0.682	0.542	4e-55
P48603	276	F-actin-capping protein s	yes	no	0.806	0.681	0.55	5e-55

>sp|Q9M9G7|CAPZB_ARATH Probable F-actin-capping protein subunit beta OS=Arabidopsis thaliana GN=At1g71790 PE=2 SV=1

 Score =  352 bits (902), Expect = 2e-96,   Method: Compositional matrix adjust.
 Identities = 169/202 (83%), Positives = 183/202 (90%)

Query: 1   MEAAMGLMRRMPPKHSETALSALLSLLPDHSSDLLSQVDQPLQVLFDEESGKEFILCEYN 60
           MEAA+GL+RRMPPK SETALSALLSL+P HSSDLLSQVD PLQVL D ESGK+FILCEYN
Sbjct: 1   MEAALGLLRRMPPKQSETALSALLSLIPQHSSDLLSQVDLPLQVLRDIESGKDFILCEYN 60

Query: 61  RDADSYRSPWSNKYHPPLEDALYPPAELRKLEIEANEVFAIYRDQYYEGGISSVYMWEDD 120
           RDADSYRSPWSNKY PPLEDALYP +ELRKLE+EAN++FAIYRDQYYEGGISSVYMWEDD
Sbjct: 61  RDADSYRSPWSNKYLPPLEDALYPSSELRKLEVEANDIFAIYRDQYYEGGISSVYMWEDD 120

Query: 121 NEGFVACFLIKKDGSKTAQGRRGHLEEGAWDAIHVIEVAPEEEGIARYCLTSTVMLSLTT 180
           NEGFVACFLIKKDGSK+  GRRG LEEGAWDAIHVI+V  EEE +A+YCLTST+MLSLTT
Sbjct: 121 NEGFVACFLIKKDGSKSGHGRRGCLEEGAWDAIHVIQVGSEEEEMAQYCLTSTIMLSLTT 180

Query: 181 DHESSGTFSLSGSIRRQVICHL 202
           D ESSG F LSGSIRRQ+   L
Sbjct: 181 DDESSGKFGLSGSIRRQMKMEL 202

F-actin-capping proteins bind in a Ca(2+)-independent manner to the fast growing ends of actin filaments (barbed end) thereby blocking the exchange of subunits at these ends. Unlike other capping proteins (such as gelsolin and severin), these proteins do not sever actin filaments.
Arabidopsis thaliana (taxid: 3702)

>sp|P13021|CAPZB_DICDI F-actin-capping protein subunit beta OS=Dictyostelium discoideum GN=acpA PE=1 SV=1

 Score =  216 bits (551), Expect = 8e-56,   Method: Compositional matrix adjust.
 Identities = 103/198 (52%), Positives = 141/198 (71%), Gaps = 6/198 (3%)

Query: 1   MEAAMGLMRRMPPKHSETALSALLSLLPDHSSDLLSQVDQPLQVLFDEESGKEFILCEYN 60
           +   + LMRR+PP   E  L+ LL L+PD + DLLS +DQPL+V +D  S K+++LC+YN
Sbjct: 6   LSCCLDLMRRLPPSQIEDNLAGLLDLVPDLTEDLLSSIDQPLKVAYDAVSKKDYLLCDYN 65

Query: 61  RDADSYRSPWSNKYHPPLEDALYPPAELRKLEIEANEVFAIYRDQYYEGGISSVYMWE-D 119
           RDADSYRSPWSNKY PPL  A YP ++LR +E++ANE+F IY + Y+EGG+SSVY W+ D
Sbjct: 66  RDADSYRSPWSNKYDPPLSGACYPSSKLRDIEVQANEIFEIYLNLYFEGGVSSVYCWDLD 125

Query: 120 DNEGFVACFLIKKDGSKTAQGRRGHLEEGAWDAIHVIEVAPEEEGIARYCLTSTVMLSLT 179
           DN  F A  L+KK      Q ++G    G WD+IHV+EV   ++  A Y LTSTVMLS+ 
Sbjct: 126 DN--FAAVVLMKK---TQDQSKKGQPMRGTWDSIHVVEVKLGKKDKAVYKLTSTVMLSIE 180

Query: 180 TDHESSGTFSLSGSIRRQ 197
           TD++++G  +L+GS+ RQ
Sbjct: 181 TDNDNTGKVNLAGSLTRQ 198

F-actin-capping proteins bind in a Ca(2+)-independent manner to the fast growing ends of actin filaments (barbed end) thereby blocking the exchange of subunits at these ends. Unlike other capping proteins (such as gelsolin and severin), these proteins do not sever actin filaments.

Dictyostelium discoideum (taxid: 44689)

>sp|Q5XI32|CAPZB_RAT F-actin-capping protein subunit beta OS=Rattus norvegicus GN=Capzb PE=1 SV=1

 Score =  215 bits (547), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 109/201 (54%), Positives = 137/201 (68%), Gaps = 12/201 (5%)

Query: 1   MEAAMGLMRRMPPKHSETALSALLSLLPDHSSDLLSQVDQPLQVLFDEESGKEFILCEYN 60
           ++ A+ LMRR+PP+  E  LS L+ L+P    DLLS VDQPL++  D+  GK+++LC+YN
Sbjct: 6   LDCALDLMRRLPPQQIEKNLSDLIDLVPSLCEDLLSSVDQPLKIARDKVVGKDYLLCDYN 65

Query: 61  RDADSYRSPWSNKYHPPLEDALYPPAELRKLEIEANEVFAIYRDQYYEGGISSVYMWEDD 120
           RD DSYRSPWSNKY PPLED   P A LRKLE+EAN  F  YRD Y+EGG+SSVY+W+ D
Sbjct: 66  RDGDSYRSPWSNKYDPPLEDGAMPSARLRKLEVEANNAFDQYRDLYFEGGVSSVYLWDLD 125

Query: 121 NEGFVACFLIKK--DGSKTAQGRRGHLEEGAWDAIHVIEVAPEEEG-IARYCLTSTVMLS 177
           + GF    LIKK  DGSK  +        G WD+IHV+EV  +  G  A Y LTSTVML 
Sbjct: 126 H-GFAGVILIKKAGDGSKKIK--------GCWDSIHVVEVQEKSSGRTAHYKLTSTVMLW 176

Query: 178 LTTDHESSGTFSLSGSIRRQV 198
           L T+   SGT +L GS+ RQ+
Sbjct: 177 LQTNKSGSGTMNLGGSLTRQM 197

F-actin-capping proteins bind in a Ca(2+)-independent manner to the fast growing ends of actin filaments (barbed end) thereby blocking the exchange of subunits at these ends. Unlike other capping proteins (such as gelsolin and severin), these proteins do not sever actin filaments. Plays a role in the regulation of cell morphology and cytoskeletal organization.

Rattus norvegicus (taxid: 10116)

>sp|Q5R507|CAPZB_PONAB F-actin-capping protein subunit beta OS=Pongo abelii GN=CAPZB PE=2 SV=2

 Score =  215 bits (547), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 109/201 (54%), Positives = 137/201 (68%), Gaps = 12/201 (5%)

Query: 1   MEAAMGLMRRMPPKHSETALSALLSLLPDHSSDLLSQVDQPLQVLFDEESGKEFILCEYN 60
           ++ A+ LMRR+PP+  E  LS L+ L+P    DLLS VDQPL++  D+  GK+++LC+YN
Sbjct: 6   LDCALDLMRRLPPQQIEKNLSDLIDLVPSLCEDLLSSVDQPLKIARDKVVGKDYLLCDYN 65

Query: 61  RDADSYRSPWSNKYHPPLEDALYPPAELRKLEIEANEVFAIYRDQYYEGGISSVYMWEDD 120
           RD DSYRSPWSNKY PPLED   P A LRKLE+EAN  F  YRD Y+EGG+SSVY+W+ D
Sbjct: 66  RDGDSYRSPWSNKYDPPLEDGAMPSARLRKLEVEANNAFDQYRDLYFEGGVSSVYLWDLD 125

Query: 121 NEGFVACFLIKK--DGSKTAQGRRGHLEEGAWDAIHVIEVAPEEEG-IARYCLTSTVMLS 177
           + GF    LIKK  DGSK  +        G WD+IHV+EV  +  G  A Y LTSTVML 
Sbjct: 126 H-GFAGVILIKKAGDGSKKIK--------GCWDSIHVVEVQEKSSGRTAHYKLTSTVMLW 176

Query: 178 LTTDHESSGTFSLSGSIRRQV 198
           L T+   SGT +L GS+ RQ+
Sbjct: 177 LQTNKSGSGTMNLGGSLTRQM 197

F-actin-capping proteins bind in a Ca(2+)-independent manner to the fast growing ends of actin filaments (barbed end) thereby blocking the exchange of subunits at these ends. Unlike other capping proteins (such as gelsolin and severin), these proteins do not sever actin filaments. Plays a role in the regulation of cell morphology and cytoskeletal organization.

Pongo abelii (taxid: 9601)

>sp|P14315|CAPZB_CHICK F-actin-capping protein subunit beta isoforms 1 and 2 OS=Gallus gallus GN=CAPZB PE=1 SV=3

 Score =  214 bits (546), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 109/201 (54%), Positives = 137/201 (68%), Gaps = 12/201 (5%)

Query: 1   MEAAMGLMRRMPPKHSETALSALLSLLPDHSSDLLSQVDQPLQVLFDEESGKEFILCEYN 60
           ++ A+ LMRR+PP+  E  LS L+ L+P    DLLS VDQPL++  D+  GK+++LC+YN
Sbjct: 6   LDCALDLMRRLPPQQIEKNLSDLIDLVPSLCEDLLSSVDQPLKIARDKVVGKDYLLCDYN 65

Query: 61  RDADSYRSPWSNKYHPPLEDALYPPAELRKLEIEANEVFAIYRDQYYEGGISSVYMWEDD 120
           RD DSYRSPWSNKY PPLED   P A LRKLE+EAN  F  YRD Y+EGG+SSVY+W+ D
Sbjct: 66  RDGDSYRSPWSNKYDPPLEDGAMPSARLRKLEVEANNAFDQYRDLYFEGGVSSVYLWDLD 125

Query: 121 NEGFVACFLIKK--DGSKTAQGRRGHLEEGAWDAIHVIEVAPEEEG-IARYCLTSTVMLS 177
           + GF    LIKK  DGSK  +        G WD+IHV+EV  +  G  A Y LTSTVML 
Sbjct: 126 H-GFAGVILIKKAGDGSKKIK--------GCWDSIHVVEVQEKSSGRTAHYKLTSTVMLW 176

Query: 178 LTTDHESSGTFSLSGSIRRQV 198
           L T+   SGT +L GS+ RQ+
Sbjct: 177 LQTNKTGSGTMNLGGSLTRQM 197

F-actin-capping proteins bind in a Ca(2+)-independent manner to the fast growing ends of actin filaments (barbed end) thereby blocking the exchange of subunits at these ends. Unlike other capping proteins (such as gelsolin and severin), these proteins do not sever actin filaments. May play a role in the regulation of cell morphology and cytoskeletal organization.

Gallus gallus (taxid: 9031)

>sp|P47756|CAPZB_HUMAN F-actin-capping protein subunit beta OS=Homo sapiens GN=CAPZB PE=1 SV=4

 Score =  214 bits (546), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 109/201 (54%), Positives = 137/201 (68%), Gaps = 12/201 (5%)

Query: 1   MEAAMGLMRRMPPKHSETALSALLSLLPDHSSDLLSQVDQPLQVLFDEESGKEFILCEYN 60
           ++ A+ LMRR+PP+  E  LS L+ L+P    DLLS VDQPL++  D+  GK+++LC+YN
Sbjct: 6   LDCALDLMRRLPPQQIEKNLSDLIDLVPSLCEDLLSSVDQPLKIARDKVVGKDYLLCDYN 65

Query: 61  RDADSYRSPWSNKYHPPLEDALYPPAELRKLEIEANEVFAIYRDQYYEGGISSVYMWEDD 120
           RD DSYRSPWSNKY PPLED   P A LRKLE+EAN  F  YRD Y+EGG+SSVY+W+ D
Sbjct: 66  RDGDSYRSPWSNKYDPPLEDGAMPSARLRKLEVEANNAFDQYRDLYFEGGVSSVYLWDLD 125

Query: 121 NEGFVACFLIKK--DGSKTAQGRRGHLEEGAWDAIHVIEVAPEEEG-IARYCLTSTVMLS 177
           + GF    LIKK  DGSK  +        G WD+IHV+EV  +  G  A Y LTSTVML 
Sbjct: 126 H-GFAGVILIKKAGDGSKKIK--------GCWDSIHVVEVQEKSSGRTAHYKLTSTVMLW 176

Query: 178 LTTDHESSGTFSLSGSIRRQV 198
           L T+   SGT +L GS+ RQ+
Sbjct: 177 LQTNKSGSGTMNLGGSLTRQM 197

F-actin-capping proteins bind in a Ca(2+)-independent manner to the fast growing ends of actin filaments (barbed end) thereby blocking the exchange of subunits at these ends. Unlike other capping proteins (such as gelsolin and severin), these proteins do not sever actin filaments. Plays a role in the regulation of cell morphology and cytoskeletal organization.

Homo sapiens (taxid: 9606)

>sp|P79136|CAPZB_BOVIN F-actin-capping protein subunit beta OS=Bos taurus GN=CAPZB PE=1 SV=1

 Score =  214 bits (546), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 109/201 (54%), Positives = 137/201 (68%), Gaps = 12/201 (5%)

Query: 1   MEAAMGLMRRMPPKHSETALSALLSLLPDHSSDLLSQVDQPLQVLFDEESGKEFILCEYN 60
           ++ A+ LMRR+PP+  E  LS L+ L+P    DLLS VDQPL++  D+  GK+++LC+YN
Sbjct: 35  LDCALDLMRRLPPQQIEKNLSDLIDLVPSLCEDLLSSVDQPLKIARDKVVGKDYLLCDYN 94

Query: 61  RDADSYRSPWSNKYHPPLEDALYPPAELRKLEIEANEVFAIYRDQYYEGGISSVYMWEDD 120
           RD DSYRSPWSNKY PPLED   P A LRKLE+EAN  F  YRD Y+EGG+SSVY+W+ D
Sbjct: 95  RDGDSYRSPWSNKYDPPLEDGAMPSARLRKLEVEANNAFDQYRDLYFEGGVSSVYLWDLD 154

Query: 121 NEGFVACFLIKK--DGSKTAQGRRGHLEEGAWDAIHVIEVAPEEEG-IARYCLTSTVMLS 177
           + GF    LIKK  DGSK  +        G WD+IHV+EV  +  G  A Y LTSTVML 
Sbjct: 155 H-GFAGVILIKKAGDGSKKIK--------GCWDSIHVVEVQEKSSGRTAHYKLTSTVMLW 205

Query: 178 LTTDHESSGTFSLSGSIRRQV 198
           L T+   SGT +L GS+ RQ+
Sbjct: 206 LQTNKSGSGTMNLGGSLTRQM 226

F-actin-capping proteins bind in a Ca(2+)-independent manner to the fast growing ends of actin filaments (barbed end) thereby blocking the exchange of subunits at these ends. Unlike other capping proteins (such as gelsolin and severin), these proteins do not sever actin filaments. The isoform beta-3 may play a role in spermatogenesis. Alternatively, may play a role in later maturation steps such as capacitation and fertilization which involve changes of membrane domains. May play a role in the regulation of cell morphology and cytoskeletal organization.

Bos taurus (taxid: 9913)

>sp|A0PFK7|CAPZB_PIG F-actin-capping protein subunit beta OS=Sus scrofa GN=CAPZB PE=2 SV=1

 Score =  214 bits (545), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 109/201 (54%), Positives = 137/201 (68%), Gaps = 12/201 (5%)

Query: 1   MEAAMGLMRRMPPKHSETALSALLSLLPDHSSDLLSQVDQPLQVLFDEESGKEFILCEYN 60
           ++ A+ LMRR+PP+  E  LS L+ L+P    DLLS VDQPL++  D+  GK+++LC+YN
Sbjct: 6   LDCALDLMRRLPPQQIEKNLSDLIDLVPSLCEDLLSSVDQPLKIARDKVVGKDYLLCDYN 65

Query: 61  RDADSYRSPWSNKYHPPLEDALYPPAELRKLEIEANEVFAIYRDQYYEGGISSVYMWEDD 120
           RD DSYRSPWSNKY PPLED   P A LRKLE+EAN  F  YRD Y+EGG+SSVY+W+ D
Sbjct: 66  RDGDSYRSPWSNKYDPPLEDGAMPSARLRKLEVEANNAFDQYRDLYFEGGVSSVYLWDLD 125

Query: 121 NEGFVACFLIKK--DGSKTAQGRRGHLEEGAWDAIHVIEVAPEEEG-IARYCLTSTVMLS 177
           + GF    LIKK  DGSK  +        G WD+IHV+EV  +  G  A Y LTSTVML 
Sbjct: 126 H-GFAGVILIKKAGDGSKKIK--------GCWDSIHVVEVQEKSSGRTAHYKLTSTVMLW 176

Query: 178 LTTDHESSGTFSLSGSIRRQV 198
           L T+   SGT +L GS+ RQ+
Sbjct: 177 LQTNKSGSGTMNLGGSLTRQM 197

F-actin-capping proteins bind in a Ca(2+)-independent manner to the fast growing ends of actin filaments (barbed end) thereby blocking the exchange of subunits at these ends. Unlike other capping proteins (such as gelsolin and severin), these proteins do not sever actin filaments. Plays a role in the regulation of cell morphology and cytoskeletal organization.

Sus scrofa (taxid: 9823)

>sp|P47757|CAPZB_MOUSE F-actin-capping protein subunit beta OS=Mus musculus GN=Capzb PE=1 SV=3

 Score =  214 bits (545), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 109/201 (54%), Positives = 137/201 (68%), Gaps = 12/201 (5%)

Query: 1   MEAAMGLMRRMPPKHSETALSALLSLLPDHSSDLLSQVDQPLQVLFDEESGKEFILCEYN 60
           ++ A+ LMRR+PP+  E  LS L+ L+P    DLLS VDQPL++  D+  GK+++LC+YN
Sbjct: 6   LDCALDLMRRLPPQQIEKNLSDLIDLVPSLCEDLLSSVDQPLKIARDKVVGKDYLLCDYN 65

Query: 61  RDADSYRSPWSNKYHPPLEDALYPPAELRKLEIEANEVFAIYRDQYYEGGISSVYMWEDD 120
           RD DSYRSPWSNKY PPLED   P A LRKLE+EAN  F  YRD Y+EGG+SSVY+W+ D
Sbjct: 66  RDGDSYRSPWSNKYDPPLEDGAMPSARLRKLEVEANNAFDQYRDLYFEGGVSSVYLWDLD 125

Query: 121 NEGFVACFLIKK--DGSKTAQGRRGHLEEGAWDAIHVIEVAPEEEG-IARYCLTSTVMLS 177
           + GF    LIKK  DGSK  +        G WD+IHV+EV  +  G  A Y LTSTVML 
Sbjct: 126 H-GFAGVILIKKAGDGSKKIK--------GCWDSIHVVEVQEKSSGRTAHYKLTSTVMLW 176

Query: 178 LTTDHESSGTFSLSGSIRRQV 198
           L T+   SGT +L GS+ RQ+
Sbjct: 177 LQTNKSGSGTMNLGGSLTRQM 197

F-actin-capping proteins bind in a Ca(2+)-independent manner to the fast growing ends of actin filaments (barbed end) thereby blocking the exchange of subunits at these ends. Unlike other capping proteins (such as gelsolin and severin), these proteins do not sever actin filaments. Plays a role in the regulation of cell morphology and cytoskeletal organization.

Mus musculus (taxid: 10090)

>sp|P48603|CAPZB_DROME F-actin-capping protein subunit beta OS=Drosophila melanogaster GN=cpb PE=2 SV=1

 Score =  214 bits (544), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 110/200 (55%), Positives = 136/200 (68%), Gaps = 12/200 (6%)

Query: 1   MEAAMGLMRRMPPKHSETALSALLSLLPDHSSDLLSQVDQPLQVLFDEESGKEFILCEYN 60
           M+ A+ LMRR+PP+  E  L  L+ L PD   DLLS VDQPL++  D+E GK+++LC+YN
Sbjct: 6   MDCALDLMRRLPPQQIEKNLIDLIDLAPDLCEDLLSSVDQPLKIAKDKEHGKDYLLCDYN 65

Query: 61  RDADSYRSPWSNKYHPPLEDALYPPAELRKLEIEANEVFAIYRDQYYEGGISSVYMWEDD 120
           RD DSYRSPWSN Y+PPLED   P   LRKLEIEAN  F  YR+ YYEGG+SSVY+W+ D
Sbjct: 66  RDGDSYRSPWSNSYYPPLEDGQMPSERLRKLEIEANYAFDQYREMYYEGGVSSVYLWDLD 125

Query: 121 NEGFVACFLIKK--DGSKTAQGRRGHLEEGAWDAIHVIEVAPEEEG-IARYCLTSTVMLS 177
           + GF A  LIKK  DGSK  +        G WD+IHV+EV  +  G  A Y LTST ML 
Sbjct: 126 H-GFAAVILIKKAGDGSKMIR--------GCWDSIHVVEVQEKTTGRTAHYKLTSTAMLW 176

Query: 178 LTTDHESSGTFSLSGSIRRQ 197
           L T+ + SGT +L GS+ RQ
Sbjct: 177 LQTNKQGSGTMNLGGSLTRQ 196

F-actin-capping proteins bind in a Ca(2+)-independent manner to the fast growing ends of actin filaments (barbed end) thereby blocking the exchange of subunits at these ends. Unlike other capping proteins (such as gelsolin and severin), these proteins do not sever actin filaments.

Drosophila melanogaster (taxid: 7227)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	233
356576111	257	PREDICTED: LOW QUALITY PROTEIN: probable	0.871	0.789	0.852	5e-97
388520833	256	unknown [Lotus japonicus]	0.871	0.792	0.847	1e-96
356535733	257	PREDICTED: probable F-actin-capping prot	0.871	0.789	0.847	3e-96
255638293	257	unknown [Glycine max]	0.871	0.789	0.847	5e-96
217072606	205	unknown [Medicago truncatula]	0.871	0.990	0.842	5e-96
388500112	256	unknown [Medicago truncatula]	0.871	0.792	0.837	1e-95
225463119	256	PREDICTED: probable F-actin-capping prot	0.849	0.773	0.853	4e-95
147838889	256	hypothetical protein VITISV_027402 [Viti	0.849	0.773	0.853	8e-95
30698814	256	capping protein (actin filament) muscle	0.866	0.789	0.836	1e-94
224082526	258	predicted protein [Populus trichocarpa]	0.849	0.767	0.888	3e-94

>gi|356576111|ref|XP_003556177.1| PREDICTED: LOW QUALITY PROTEIN: probable F-actin-capping protein subunit beta-like [Glycine max]

 Score =  359 bits (921), Expect = 5e-97,   Method: Compositional matrix adjust.
 Identities = 173/203 (85%), Positives = 186/203 (91%)

Query: 1   MEAAMGLMRRMPPKHSETALSALLSLLPDHSSDLLSQVDQPLQVLFDEESGKEFILCEYN 60
           MEAAMGLMRR+PPKH+ETALSALLSL+PD+SSDLLSQVDQPLQVL D E GKEFILCEYN
Sbjct: 1   MEAAMGLMRRIPPKHTETALSALLSLMPDNSSDLLSQVDQPLQVLCDVECGKEFILCEYN 60

Query: 61  RDADSYRSPWSNKYHPPLEDALYPPAELRKLEIEANEVFAIYRDQYYEGGISSVYMWEDD 120
           RDADSYRSPWSNKYHPPLED   P +ELRKLEIEAN++FAIYRDQYYEGGISSVYMWEDD
Sbjct: 61  RDADSYRSPWSNKYHPPLEDGSLPSSELRKLEIEANDIFAIYRDQYYEGGISSVYMWEDD 120

Query: 121 NEGFVACFLIKKDGSKTAQGRRGHLEEGAWDAIHVIEVAPEEEGIARYCLTSTVMLSLTT 180
           NEGFVACFLIKKDGSKT QGRRG+LEEGAWDAIHVIEV PEEE    Y LTSTVML+LTT
Sbjct: 121 NEGFVACFLIKKDGSKTGQGRRGYLEEGAWDAIHVIEVGPEEEENTNYRLTSTVMLTLTT 180

Query: 181 DHESSGTFSLSGSIRRQVICHLN 203
           ++ESSGTFSLSGSIRRQ+   L+
Sbjct: 181 NNESSGTFSLSGSIRRQMSMKLS 203

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388520833|gb|AFK48478.1| unknown [Lotus japonicus]

 Score =  358 bits (918), Expect = 1e-96,   Method: Compositional matrix adjust.
 Identities = 172/203 (84%), Positives = 186/203 (91%)

Query: 1   MEAAMGLMRRMPPKHSETALSALLSLLPDHSSDLLSQVDQPLQVLFDEESGKEFILCEYN 60
           MEAAMGLMRR+PPKH++TALSALLSL+P+HSSDLLSQVDQPLQVL D +SGKEFILCEYN
Sbjct: 1   MEAAMGLMRRIPPKHTDTALSALLSLMPNHSSDLLSQVDQPLQVLCDVDSGKEFILCEYN 60

Query: 61  RDADSYRSPWSNKYHPPLEDALYPPAELRKLEIEANEVFAIYRDQYYEGGISSVYMWEDD 120
           RDADSYRSPWSNKYHPPLED   P AELRKLEIEA+++FAIYRDQYYEGGISSVYMWEDD
Sbjct: 61  RDADSYRSPWSNKYHPPLEDGSLPSAELRKLEIEASDIFAIYRDQYYEGGISSVYMWEDD 120

Query: 121 NEGFVACFLIKKDGSKTAQGRRGHLEEGAWDAIHVIEVAPEEEGIARYCLTSTVMLSLTT 180
           NEGFVACFLIKKDGSKT QGRRG+LEEGAWDAIHVIEV PEEE    Y LTSTVML+LTT
Sbjct: 121 NEGFVACFLIKKDGSKTGQGRRGYLEEGAWDAIHVIEVGPEEEENTNYRLTSTVMLTLTT 180

Query: 181 DHESSGTFSLSGSIRRQVICHLN 203
            +ESSGTFSLSGSIRRQ+   L+
Sbjct: 181 SNESSGTFSLSGSIRRQMNMKLS 203

Source: Lotus japonicus

Species: Lotus japonicus

Genus: Lotus

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356535733|ref|XP_003536398.1| PREDICTED: probable F-actin-capping protein subunit beta-like [Glycine max]

 Score =  357 bits (915), Expect = 3e-96,   Method: Compositional matrix adjust.
 Identities = 172/203 (84%), Positives = 184/203 (90%)

Query: 1   MEAAMGLMRRMPPKHSETALSALLSLLPDHSSDLLSQVDQPLQVLFDEESGKEFILCEYN 60
           MEA MGLMRR+PPKH+ETALSALLSL+P HSSDLLSQVDQPLQVL D E GKEFILCEYN
Sbjct: 1   MEAVMGLMRRIPPKHTETALSALLSLMPHHSSDLLSQVDQPLQVLCDVECGKEFILCEYN 60

Query: 61  RDADSYRSPWSNKYHPPLEDALYPPAELRKLEIEANEVFAIYRDQYYEGGISSVYMWEDD 120
           RDADSYRSPWSNKYHPPLED   P +ELRKLEIEAN++FAIYRDQYYEGGISSVYMWEDD
Sbjct: 61  RDADSYRSPWSNKYHPPLEDGSLPSSELRKLEIEANDIFAIYRDQYYEGGISSVYMWEDD 120

Query: 121 NEGFVACFLIKKDGSKTAQGRRGHLEEGAWDAIHVIEVAPEEEGIARYCLTSTVMLSLTT 180
           NEGFVACFLIKKDGSKT QGRRG+LEEGAWDAIHVIEV PEEE    Y LTSTVML+LTT
Sbjct: 121 NEGFVACFLIKKDGSKTGQGRRGYLEEGAWDAIHVIEVGPEEEENTNYRLTSTVMLTLTT 180

Query: 181 DHESSGTFSLSGSIRRQVICHLN 203
           ++ESSGTFSLSGSIRRQ+   L+
Sbjct: 181 NNESSGTFSLSGSIRRQMSMKLS 203

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255638293|gb|ACU19459.1| unknown [Glycine max]

 Score =  356 bits (913), Expect = 5e-96,   Method: Compositional matrix adjust.
 Identities = 172/203 (84%), Positives = 185/203 (91%)

Query: 1   MEAAMGLMRRMPPKHSETALSALLSLLPDHSSDLLSQVDQPLQVLFDEESGKEFILCEYN 60
           MEAAMGLMRR+PPKH+ETALSALLSL+PD+SSDLLSQVDQPLQVL D E GKEFILCEYN
Sbjct: 1   MEAAMGLMRRIPPKHTETALSALLSLMPDNSSDLLSQVDQPLQVLCDVECGKEFILCEYN 60

Query: 61  RDADSYRSPWSNKYHPPLEDALYPPAELRKLEIEANEVFAIYRDQYYEGGISSVYMWEDD 120
           RDADSYRSPWSNKYHPPLED   P +ELRKLEIEAN++FAIYRDQYYEGGISSVYMWEDD
Sbjct: 61  RDADSYRSPWSNKYHPPLEDGSLPSSELRKLEIEANDIFAIYRDQYYEGGISSVYMWEDD 120

Query: 121 NEGFVACFLIKKDGSKTAQGRRGHLEEGAWDAIHVIEVAPEEEGIARYCLTSTVMLSLTT 180
           NEGFVACFLIKKDGSKT QGRRG+LEEGAWDAIHVIEV PEEE    Y LTSTVML+LTT
Sbjct: 121 NEGFVACFLIKKDGSKTGQGRRGYLEEGAWDAIHVIEVGPEEEENTNYRLTSTVMLTLTT 180

Query: 181 DHESSGTFSLSGSIRRQVICHLN 203
           ++ESSGTFSL GSIRRQ+   L+
Sbjct: 181 NNESSGTFSLFGSIRRQMSMKLS 203

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|217072606|gb|ACJ84663.1| unknown [Medicago truncatula]

 Score =  356 bits (913), Expect = 5e-96,   Method: Compositional matrix adjust.
 Identities = 171/203 (84%), Positives = 186/203 (91%)

Query: 1   MEAAMGLMRRMPPKHSETALSALLSLLPDHSSDLLSQVDQPLQVLFDEESGKEFILCEYN 60
           MEAAMGLMRR+PPKH+ETALSALLSL+P+HSSDLLSQVDQPLQVL D + GKEFILCEYN
Sbjct: 1   MEAAMGLMRRIPPKHTETALSALLSLMPNHSSDLLSQVDQPLQVLCDVDCGKEFILCEYN 60

Query: 61  RDADSYRSPWSNKYHPPLEDALYPPAELRKLEIEANEVFAIYRDQYYEGGISSVYMWEDD 120
           RDADSYRSPWSNKYHPPLED   P +ELRKLEIEAN++FAIYRDQYYEGGISSVYMWED+
Sbjct: 61  RDADSYRSPWSNKYHPPLEDGSLPSSELRKLEIEANDIFAIYRDQYYEGGISSVYMWEDE 120

Query: 121 NEGFVACFLIKKDGSKTAQGRRGHLEEGAWDAIHVIEVAPEEEGIARYCLTSTVMLSLTT 180
           NEGFVACFLIKKDGSKT QGRRG+LEEGAWDAIHVIEV PEEE    Y LTSTVML+LTT
Sbjct: 121 NEGFVACFLIKKDGSKTGQGRRGYLEEGAWDAIHVIEVGPEEEEDTNYRLTSTVMLTLTT 180

Query: 181 DHESSGTFSLSGSIRRQVICHLN 203
           ++ESSGTFSLSGSIRRQ+   L+
Sbjct: 181 NNESSGTFSLSGSIRRQMSMRLS 203

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388500112|gb|AFK38122.1| unknown [Medicago truncatula]

 Score =  354 bits (909), Expect = 1e-95,   Method: Compositional matrix adjust.
 Identities = 170/203 (83%), Positives = 185/203 (91%)

Query: 1   MEAAMGLMRRMPPKHSETALSALLSLLPDHSSDLLSQVDQPLQVLFDEESGKEFILCEYN 60
           MEAAMGLMRR+PPKH+ETALSALLSL+P+HSSDLLSQVDQPLQVL D + GKEFILCEYN
Sbjct: 1   MEAAMGLMRRIPPKHTETALSALLSLMPNHSSDLLSQVDQPLQVLCDVDCGKEFILCEYN 60

Query: 61  RDADSYRSPWSNKYHPPLEDALYPPAELRKLEIEANEVFAIYRDQYYEGGISSVYMWEDD 120
           RDADSYR PWSNKYHPPLED   P +ELRKLEIEAN++FAIYRDQYYEGGISSVYMWED+
Sbjct: 61  RDADSYRPPWSNKYHPPLEDGSLPSSELRKLEIEANDIFAIYRDQYYEGGISSVYMWEDE 120

Query: 121 NEGFVACFLIKKDGSKTAQGRRGHLEEGAWDAIHVIEVAPEEEGIARYCLTSTVMLSLTT 180
           NEGFVACFLIKKDGSKT QGRRG+LEEGAWDAIHVIEV PEEE    Y LTSTVML+LTT
Sbjct: 121 NEGFVACFLIKKDGSKTGQGRRGYLEEGAWDAIHVIEVGPEEEEDTNYRLTSTVMLTLTT 180

Query: 181 DHESSGTFSLSGSIRRQVICHLN 203
           ++ESSGTFSLSGSIRRQ+   L+
Sbjct: 181 NNESSGTFSLSGSIRRQMSMRLS 203

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225463119|ref|XP_002265135.1| PREDICTED: probable F-actin-capping protein subunit beta [Vitis vinifera] gi|297739352|emb|CBI29342.3| unnamed protein product [Vitis vinifera]

 Score =  353 bits (905), Expect = 4e-95,   Method: Compositional matrix adjust.
 Identities = 169/198 (85%), Positives = 182/198 (91%)

Query: 1   MEAAMGLMRRMPPKHSETALSALLSLLPDHSSDLLSQVDQPLQVLFDEESGKEFILCEYN 60
           MEAA+GLMRR+ PKHSETALSALL LLP  SSDLLSQVDQPLQVL D +SGKEFILCEYN
Sbjct: 1   MEAALGLMRRIHPKHSETALSALLGLLPHLSSDLLSQVDQPLQVLCDVDSGKEFILCEYN 60

Query: 61  RDADSYRSPWSNKYHPPLEDALYPPAELRKLEIEANEVFAIYRDQYYEGGISSVYMWEDD 120
           RDADSYRSPWSNKYHPPLED  YP +ELRKLEIEANEVF+IYRDQYYEGGISSVYMWED+
Sbjct: 61  RDADSYRSPWSNKYHPPLEDGPYPSSELRKLEIEANEVFSIYRDQYYEGGISSVYMWEDE 120

Query: 121 NEGFVACFLIKKDGSKTAQGRRGHLEEGAWDAIHVIEVAPEEEGIARYCLTSTVMLSLTT 180
           NEGFV CFLIKKDGSKT  GRRG+L+EG+WDAIHVIEV P+EEGI  YCLTSTVMLSLTT
Sbjct: 121 NEGFVGCFLIKKDGSKTGHGRRGYLQEGSWDAIHVIEVGPDEEGITHYCLTSTVMLSLTT 180

Query: 181 DHESSGTFSLSGSIRRQV 198
           + +SSGTFSLSGSIRRQ+
Sbjct: 181 NDQSSGTFSLSGSIRRQM 198

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147838889|emb|CAN65826.1| hypothetical protein VITISV_027402 [Vitis vinifera]

 Score =  352 bits (902), Expect = 8e-95,   Method: Compositional matrix adjust.
 Identities = 169/198 (85%), Positives = 182/198 (91%)

Query: 1   MEAAMGLMRRMPPKHSETALSALLSLLPDHSSDLLSQVDQPLQVLFDEESGKEFILCEYN 60
           MEAA+GLMRR+ PKHSETALSALL LLP  SSDLLSQVDQPLQVL D +SGKEFILCEYN
Sbjct: 1   MEAALGLMRRIHPKHSETALSALLGLLPHLSSDLLSQVDQPLQVLCDVDSGKEFILCEYN 60

Query: 61  RDADSYRSPWSNKYHPPLEDALYPPAELRKLEIEANEVFAIYRDQYYEGGISSVYMWEDD 120
           RDADSYRSPWSNKYHPPLED  YP +ELRKLEIEANEVF+IYRDQYYEGGISSVYMWED+
Sbjct: 61  RDADSYRSPWSNKYHPPLEDGPYPSSELRKLEIEANEVFSIYRDQYYEGGISSVYMWEDE 120

Query: 121 NEGFVACFLIKKDGSKTAQGRRGHLEEGAWDAIHVIEVAPEEEGIARYCLTSTVMLSLTT 180
           NEGFV CFLIKKDGSKT  GRRG+L+EG+WDAIHVIEV P+EEGI  YCLTSTVMLSLTT
Sbjct: 121 NEGFVXCFLIKKDGSKTGHGRRGYLQEGSWDAIHVIEVGPDEEGITHYCLTSTVMLSLTT 180

Query: 181 DHESSGTFSLSGSIRRQV 198
           + +SSGTFSLSGSIRRQ+
Sbjct: 181 NDQSSGTFSLSGSIRRQM 198

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|30698814|ref|NP_177324.2| capping protein (actin filament) muscle Z-line, beta [Arabidopsis thaliana] gi|34222650|sp|Q9M9G7.1|CAPZB_ARATH RecName: Full=Probable F-actin-capping protein subunit beta; AltName: Full=CapZ-beta gi|7239506|gb|AAF43232.1|AC012654_16 Similar to the F-actin capping protein beta subunit from Dictyostelium discoideum gi|115598 [Arabidopsis thaliana] gi|117958773|gb|ABK59688.1| At1g71790 [Arabidopsis thaliana] gi|332197112|gb|AEE35233.1| capping protein (actin filament) muscle Z-line, beta [Arabidopsis thaliana]

 Score =  352 bits (902), Expect = 1e-94,   Method: Compositional matrix adjust.
 Identities = 169/202 (83%), Positives = 183/202 (90%)

Query: 1   MEAAMGLMRRMPPKHSETALSALLSLLPDHSSDLLSQVDQPLQVLFDEESGKEFILCEYN 60
           MEAA+GL+RRMPPK SETALSALLSL+P HSSDLLSQVD PLQVL D ESGK+FILCEYN
Sbjct: 1   MEAALGLLRRMPPKQSETALSALLSLIPQHSSDLLSQVDLPLQVLRDIESGKDFILCEYN 60

Query: 61  RDADSYRSPWSNKYHPPLEDALYPPAELRKLEIEANEVFAIYRDQYYEGGISSVYMWEDD 120
           RDADSYRSPWSNKY PPLEDALYP +ELRKLE+EAN++FAIYRDQYYEGGISSVYMWEDD
Sbjct: 61  RDADSYRSPWSNKYLPPLEDALYPSSELRKLEVEANDIFAIYRDQYYEGGISSVYMWEDD 120

Query: 121 NEGFVACFLIKKDGSKTAQGRRGHLEEGAWDAIHVIEVAPEEEGIARYCLTSTVMLSLTT 180
           NEGFVACFLIKKDGSK+  GRRG LEEGAWDAIHVI+V  EEE +A+YCLTST+MLSLTT
Sbjct: 121 NEGFVACFLIKKDGSKSGHGRRGCLEEGAWDAIHVIQVGSEEEEMAQYCLTSTIMLSLTT 180

Query: 181 DHESSGTFSLSGSIRRQVICHL 202
           D ESSG F LSGSIRRQ+   L
Sbjct: 181 DDESSGKFGLSGSIRRQMKMEL 202

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224082526|ref|XP_002306729.1| predicted protein [Populus trichocarpa] gi|222856178|gb|EEE93725.1| predicted protein [Populus trichocarpa]

 Score =  350 bits (898), Expect = 3e-94,   Method: Compositional matrix adjust.
 Identities = 176/198 (88%), Positives = 187/198 (94%)

Query: 1   MEAAMGLMRRMPPKHSETALSALLSLLPDHSSDLLSQVDQPLQVLFDEESGKEFILCEYN 60
           MEAAMGLMRR+ PK SETALSALLSLLP HSSDLLSQVDQPLQVL D ESGKE+ILCEYN
Sbjct: 1   MEAAMGLMRRIHPKQSETALSALLSLLPHHSSDLLSQVDQPLQVLCDLESGKEYILCEYN 60

Query: 61  RDADSYRSPWSNKYHPPLEDALYPPAELRKLEIEANEVFAIYRDQYYEGGISSVYMWEDD 120
           RDADSYRSPWSNKY+PPLEDALYP +ELRKLE+EANEVFA+YRDQYYEGGISSVYMWEDD
Sbjct: 61  RDADSYRSPWSNKYYPPLEDALYPSSELRKLEVEANEVFAVYRDQYYEGGISSVYMWEDD 120

Query: 121 NEGFVACFLIKKDGSKTAQGRRGHLEEGAWDAIHVIEVAPEEEGIARYCLTSTVMLSLTT 180
           NEGFVACFLIKKDGSKT QGRRGHL+EGAWDAIHVIEV PEEE +A YCLTST+MLSLTT
Sbjct: 121 NEGFVACFLIKKDGSKTGQGRRGHLQEGAWDAIHVIEVGPEEESMAHYCLTSTIMLSLTT 180

Query: 181 DHESSGTFSLSGSIRRQV 198
           + ESSGTFSLSGSIRRQ+
Sbjct: 181 NDESSGTFSLSGSIRRQM 198

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	233
TAIR|locus:2013026	256	CPB "capping protein B" [Arabi	0.849	0.773	0.767	2.6e-79
FB|FBgn0011570	276	cpb "capping protein beta" [Dr	0.806	0.681	0.505	3.8e-46
UNIPROTKB|P79136	301	CAPZB "F-actin-capping protein	0.811	0.627	0.497	6.2e-46
UNIPROTKB|F1PQS3	371	CAPZB "Uncharacterized protein	0.811	0.509	0.497	6.2e-46
UNIPROTKB|B1AK85	260	CAPZB "F-actin-capping protein	0.811	0.726	0.497	6.2e-46
UNIPROTKB|B1AK88	301	CAPZB "Capping protein (Actin	0.811	0.627	0.497	6.2e-46
UNIPROTKB|P47756	277	CAPZB "F-actin-capping protein	0.811	0.682	0.497	6.2e-46
UNIPROTKB|A0PFK7	277	CAPZB "F-actin-capping protein	0.811	0.682	0.497	6.2e-46
UNIPROTKB|A9XFX6	272	Capzb "F-actin capping protein	0.811	0.694	0.497	6.2e-46
UNIPROTKB|D2JYW4	277	CAPZB "F-actin-capping protein	0.811	0.682	0.497	6.2e-46

TAIR|locus:2013026 CPB "capping protein B" [Arabidopsis thaliana (taxid:3702)]

 Score = 797 (285.6 bits), Expect = 2.6e-79, P = 2.6e-79
 Identities = 152/198 (76%), Positives = 165/198 (83%)

Query:     1 MEAAMGLMRRMPPKHSETXXXXXXXXXXXXXXXXXXQVDQPLQVLFDEESGKEFILCEYN 60
             MEAA+GL+RRMPPK SET                  QVD PLQVL D ESGK+FILCEYN
Sbjct:     1 MEAALGLLRRMPPKQSETALSALLSLIPQHSSDLLSQVDLPLQVLRDIESGKDFILCEYN 60

Query:    61 RDADSYRSPWSNKYHPPLEDALYPPAELRKLEIEANEVFAIYRDQYYEGGISSVYMWEDD 120
             RDADSYRSPWSNKY PPLEDALYP +ELRKLE+EAN++FAIYRDQYYEGGISSVYMWEDD
Sbjct:    61 RDADSYRSPWSNKYLPPLEDALYPSSELRKLEVEANDIFAIYRDQYYEGGISSVYMWEDD 120

Query:   121 NEGFVACFLIKKDGSKTAQGRRGHLEEGAWDAIHVIEVAPEEEGIARYCLTSTVMLSLTT 180
             NEGFVACFLIKKDGSK+  GRRG LEEGAWDAIHVI+V  EEE +A+YCLTST+MLSLTT
Sbjct:   121 NEGFVACFLIKKDGSKSGHGRRGCLEEGAWDAIHVIQVGSEEEEMAQYCLTSTIMLSLTT 180

Query:   181 DHESSGTFSLSGSIRRQV 198
             D ESSG F LSGSIRRQ+
Sbjct:   181 DDESSGKFGLSGSIRRQM 198

GO:0003779 "actin binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0008290 "F-actin capping protein complex" evidence=IEA;ISS

GO:0030036 "actin cytoskeleton organization" evidence=ISS;IMP

GO:0007015 "actin filament organization" evidence=IMP

GO:0009408 "response to heat" evidence=IMP

GO:0051693 "actin filament capping" evidence=IMP

FB|FBgn0011570 cpb "capping protein beta" [Drosophila melanogaster (taxid:7227)]

 Score = 484 (175.4 bits), Expect = 3.8e-46, P = 3.8e-46
 Identities = 101/200 (50%), Positives = 126/200 (63%)

Query:     1 MEAAMGLMRRMPPKHSETXXXXXXXXXXXXXXXXXXQVDQPLQVLFDEESGKEFILCEYN 60
             M+ A+ LMRR+PP+  E                    VDQPL++  D+E GK+++LC+YN
Sbjct:     6 MDCALDLMRRLPPQQIEKNLIDLIDLAPDLCEDLLSSVDQPLKIAKDKEHGKDYLLCDYN 65

Query:    61 RDADSYRSPWSNKYHPPLEDALYPPAELRKLEIEANEVFAIYRDQYYEGGISSVYMWEDD 120
             RD DSYRSPWSN Y+PPLED   P   LRKLEIEAN  F  YR+ YYEGG+SSVY+W+ D
Sbjct:    66 RDGDSYRSPWSNSYYPPLEDGQMPSERLRKLEIEANYAFDQYREMYYEGGVSSVYLWDLD 125

Query:   121 NEGFVACFLIKK--DGSKTAQGRRGHLEEGAWDAIHVIEVAPEEEG-IARYCLTSTVMLS 177
             + GF A  LIKK  DGSK  +G         WD+IHV+EV  +  G  A Y LTST ML 
Sbjct:   126 H-GFAAVILIKKAGDGSKMIRG--------CWDSIHVVEVQEKTTGRTAHYKLTSTAMLW 176

Query:   178 LTTDHESSGTFSLSGSIRRQ 197
             L T+ + SGT +L GS+ RQ
Sbjct:   177 LQTNKQGSGTMNLGGSLTRQ 196

GO:0051016 "barbed-end actin filament capping" evidence=IDA

GO:0008290 "F-actin capping protein complex" evidence=ISS;NAS

GO:0003779 "actin binding" evidence=ISS

GO:0030832 "regulation of actin filament length" evidence=IMP

GO:0007015 "actin filament organization" evidence=IMP

GO:0071203 "WASH complex" evidence=IEA

GO:0030036 "actin cytoskeleton organization" evidence=IMP

GO:0010591 "regulation of lamellipodium assembly" evidence=IMP

GO:0035220 "wing disc development" evidence=IMP

GO:0007298 "border follicle cell migration" evidence=IMP

GO:0007303 "cytoplasmic transport, nurse cell to oocyte" evidence=IMP

GO:0000902 "cell morphogenesis" evidence=IMP

GO:0051490 "negative regulation of filopodium assembly" evidence=IMP

UNIPROTKB|P79136 CAPZB "F-actin-capping protein subunit beta" [Bos taurus (taxid:9913)]

 Score = 482 (174.7 bits), Expect = 6.2e-46, P = 6.2e-46
 Identities = 100/201 (49%), Positives = 126/201 (62%)

Query:     1 MEAAMGLMRRMPPKHSETXXXXXXXXXXXXXXXXXXQVDQPLQVLFDEESGKEFILCEYN 60
             ++ A+ LMRR+PP+  E                    VDQPL++  D+  GK+++LC+YN
Sbjct:    35 LDCALDLMRRLPPQQIEKNLSDLIDLVPSLCEDLLSSVDQPLKIARDKVVGKDYLLCDYN 94

Query:    61 RDADSYRSPWSNKYHPPLEDALYPPAELRKLEIEANEVFAIYRDQYYEGGISSVYMWEDD 120
             RD DSYRSPWSNKY PPLED   P A LRKLE+EAN  F  YRD Y+EGG+SSVY+W+ D
Sbjct:    95 RDGDSYRSPWSNKYDPPLEDGAMPSARLRKLEVEANNAFDQYRDLYFEGGVSSVYLWDLD 154

Query:   121 NEGFVACFLIKK--DGSKTAQGRRGHLEEGAWDAIHVIEVAPEEEG-IARYCLTSTVMLS 177
             + GF    LIKK  DGSK  +G         WD+IHV+EV  +  G  A Y LTSTVML 
Sbjct:   155 H-GFAGVILIKKAGDGSKKIKG--------CWDSIHVVEVQEKSSGRTAHYKLTSTVMLW 205

Query:   178 LTTDHESSGTFSLSGSIRRQV 198
             L T+   SGT +L GS+ RQ+
Sbjct:   206 LQTNKSGSGTMNLGGSLTRQM 226

GO:0005515 "protein binding" evidence=IPI

GO:0022604 "regulation of cell morphogenesis" evidence=ISS

GO:0007010 "cytoskeleton organization" evidence=ISS

GO:0071203 "WASH complex" evidence=ISS

GO:0033150 "cytoskeletal calyx" evidence=IEA

GO:0030863 "cortical cytoskeleton" evidence=IEA

GO:0030032 "lamellipodium assembly" evidence=IEA

GO:0030027 "lamellipodium" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0051693 "actin filament capping" evidence=IEA

GO:0003779 "actin binding" evidence=IEA

GO:0030036 "actin cytoskeleton organization" evidence=IEA

GO:0008290 "F-actin capping protein complex" evidence=IEA

UNIPROTKB|F1PQS3 CAPZB "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 482 (174.7 bits), Expect = 6.2e-46, P = 6.2e-46
 Identities = 100/201 (49%), Positives = 126/201 (62%)

Query:     1 MEAAMGLMRRMPPKHSETXXXXXXXXXXXXXXXXXXQVDQPLQVLFDEESGKEFILCEYN 60
             ++ A+ LMRR+PP+  E                    VDQPL++  D+  GK+++LC+YN
Sbjct:   105 LDCALDLMRRLPPQQIEKNLSDLIDLVPSLCEDLLSSVDQPLKIARDKVVGKDYLLCDYN 164

Query:    61 RDADSYRSPWSNKYHPPLEDALYPPAELRKLEIEANEVFAIYRDQYYEGGISSVYMWEDD 120
             RD DSYRSPWSNKY PPLED   P A LRKLE+EAN  F  YRD Y+EGG+SSVY+W+ D
Sbjct:   165 RDGDSYRSPWSNKYDPPLEDGAMPSARLRKLEVEANNAFDQYRDLYFEGGVSSVYLWDLD 224

Query:   121 NEGFVACFLIKK--DGSKTAQGRRGHLEEGAWDAIHVIEVAPEEEG-IARYCLTSTVMLS 177
             + GF    LIKK  DGSK  +G         WD+IHV+EV  +  G  A Y LTSTVML 
Sbjct:   225 H-GFAGVILIKKAGDGSKKIKG--------CWDSIHVVEVQEKSSGRTAHYKLTSTVMLW 275

Query:   178 LTTDHESSGTFSLSGSIRRQV 198
             L T+   SGT +L GS+ RQ+
Sbjct:   276 LQTNKSGSGTMNLGGSLTRQM 296

GO:0071203 "WASH complex" evidence=IEA

GO:0030863 "cortical cytoskeleton" evidence=IEA

GO:0030032 "lamellipodium assembly" evidence=IEA

GO:0030027 "lamellipodium" evidence=IEA

GO:0022604 "regulation of cell morphogenesis" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0030036 "actin cytoskeleton organization" evidence=IEA

GO:0008290 "F-actin capping protein complex" evidence=IEA

GO:0003779 "actin binding" evidence=IEA

UNIPROTKB|B1AK85 CAPZB "F-actin-capping protein subunit beta" [Homo sapiens (taxid:9606)]

 Score = 482 (174.7 bits), Expect = 6.2e-46, P = 6.2e-46
 Identities = 100/201 (49%), Positives = 126/201 (62%)

Query:     1 MEAAMGLMRRMPPKHSETXXXXXXXXXXXXXXXXXXQVDQPLQVLFDEESGKEFILCEYN 60
             ++ A+ LMRR+PP+  E                    VDQPL++  D+  GK+++LC+YN
Sbjct:    32 LDCALDLMRRLPPQQIEKNLSDLIDLVPSLCEDLLSSVDQPLKIARDKVVGKDYLLCDYN 91

Query:    61 RDADSYRSPWSNKYHPPLEDALYPPAELRKLEIEANEVFAIYRDQYYEGGISSVYMWEDD 120
             RD DSYRSPWSNKY PPLED   P A LRKLE+EAN  F  YRD Y+EGG+SSVY+W+ D
Sbjct:    92 RDGDSYRSPWSNKYDPPLEDGAMPSARLRKLEVEANNAFDQYRDLYFEGGVSSVYLWDLD 151

Query:   121 NEGFVACFLIKK--DGSKTAQGRRGHLEEGAWDAIHVIEVAPEEEG-IARYCLTSTVMLS 177
             + GF    LIKK  DGSK  +G         WD+IHV+EV  +  G  A Y LTSTVML 
Sbjct:   152 H-GFAGVILIKKAGDGSKKIKG--------CWDSIHVVEVQEKSSGRTAHYKLTSTVMLW 202

Query:   178 LTTDHESSGTFSLSGSIRRQV 198
             L T+   SGT +L GS+ RQ+
Sbjct:   203 LQTNKSGSGTMNLGGSLTRQM 223

GO:0003779 "actin binding" evidence=IEA

GO:0008290 "F-actin capping protein complex" evidence=IEA

GO:0030036 "actin cytoskeleton organization" evidence=IEA

GO:0071203 "WASH complex" evidence=IEA

UNIPROTKB|B1AK88 CAPZB "Capping protein (Actin filament) muscle Z-line, beta, isoform CRA_d" [Homo sapiens (taxid:9606)]

 Score = 482 (174.7 bits), Expect = 6.2e-46, P = 6.2e-46
 Identities = 100/201 (49%), Positives = 126/201 (62%)

Query:     1 MEAAMGLMRRMPPKHSETXXXXXXXXXXXXXXXXXXQVDQPLQVLFDEESGKEFILCEYN 60
             ++ A+ LMRR+PP+  E                    VDQPL++  D+  GK+++LC+YN
Sbjct:    35 LDCALDLMRRLPPQQIEKNLSDLIDLVPSLCEDLLSSVDQPLKIARDKVVGKDYLLCDYN 94

Query:    61 RDADSYRSPWSNKYHPPLEDALYPPAELRKLEIEANEVFAIYRDQYYEGGISSVYMWEDD 120
             RD DSYRSPWSNKY PPLED   P A LRKLE+EAN  F  YRD Y+EGG+SSVY+W+ D
Sbjct:    95 RDGDSYRSPWSNKYDPPLEDGAMPSARLRKLEVEANNAFDQYRDLYFEGGVSSVYLWDLD 154

Query:   121 NEGFVACFLIKK--DGSKTAQGRRGHLEEGAWDAIHVIEVAPEEEG-IARYCLTSTVMLS 177
             + GF    LIKK  DGSK  +G         WD+IHV+EV  +  G  A Y LTSTVML 
Sbjct:   155 H-GFAGVILIKKAGDGSKKIKG--------CWDSIHVVEVQEKSSGRTAHYKLTSTVMLW 205

Query:   178 LTTDHESSGTFSLSGSIRRQV 198
             L T+   SGT +L GS+ RQ+
Sbjct:   206 LQTNKSGSGTMNLGGSLTRQM 226

GO:0003779 "actin binding" evidence=IEA

GO:0008290 "F-actin capping protein complex" evidence=IEA

GO:0030036 "actin cytoskeleton organization" evidence=IEA

GO:0071203 "WASH complex" evidence=IEA

UNIPROTKB|P47756 CAPZB "F-actin-capping protein subunit beta" [Homo sapiens (taxid:9606)]

 Score = 482 (174.7 bits), Expect = 6.2e-46, P = 6.2e-46
 Identities = 100/201 (49%), Positives = 126/201 (62%)

Query:     1 MEAAMGLMRRMPPKHSETXXXXXXXXXXXXXXXXXXQVDQPLQVLFDEESGKEFILCEYN 60
             ++ A+ LMRR+PP+  E                    VDQPL++  D+  GK+++LC+YN
Sbjct:     6 LDCALDLMRRLPPQQIEKNLSDLIDLVPSLCEDLLSSVDQPLKIARDKVVGKDYLLCDYN 65

Query:    61 RDADSYRSPWSNKYHPPLEDALYPPAELRKLEIEANEVFAIYRDQYYEGGISSVYMWEDD 120
             RD DSYRSPWSNKY PPLED   P A LRKLE+EAN  F  YRD Y+EGG+SSVY+W+ D
Sbjct:    66 RDGDSYRSPWSNKYDPPLEDGAMPSARLRKLEVEANNAFDQYRDLYFEGGVSSVYLWDLD 125

Query:   121 NEGFVACFLIKK--DGSKTAQGRRGHLEEGAWDAIHVIEVAPEEEG-IARYCLTSTVMLS 177
             + GF    LIKK  DGSK  +G         WD+IHV+EV  +  G  A Y LTSTVML 
Sbjct:   126 H-GFAGVILIKKAGDGSKKIKG--------CWDSIHVVEVQEKSSGRTAHYKLTSTVMLW 176

Query:   178 LTTDHESSGTFSLSGSIRRQV 198
             L T+   SGT +L GS+ RQ+
Sbjct:   177 LQTNKSGSGTMNLGGSLTRQM 197

GO:0008290 "F-actin capping protein complex" evidence=IEA

GO:0030036 "actin cytoskeleton organization" evidence=IEA

GO:0003779 "actin binding" evidence=IEA

GO:0051693 "actin filament capping" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0030027 "lamellipodium" evidence=IEA

GO:0030032 "lamellipodium assembly" evidence=IEA

GO:0030863 "cortical cytoskeleton" evidence=IEA

GO:0006928 "cellular component movement" evidence=TAS

GO:0005856 "cytoskeleton" evidence=TAS

GO:0071203 "WASH complex" evidence=IDA

GO:0007010 "cytoskeleton organization" evidence=IMP

GO:0022604 "regulation of cell morphogenesis" evidence=IMP

GO:0015629 "actin cytoskeleton" evidence=TAS

GO:0005829 "cytosol" evidence=TAS

GO:0007596 "blood coagulation" evidence=TAS

UNIPROTKB|A0PFK7 CAPZB "F-actin-capping protein subunit beta" [Sus scrofa (taxid:9823)]

 Score = 482 (174.7 bits), Expect = 6.2e-46, P = 6.2e-46
 Identities = 100/201 (49%), Positives = 126/201 (62%)

Query:     1 MEAAMGLMRRMPPKHSETXXXXXXXXXXXXXXXXXXQVDQPLQVLFDEESGKEFILCEYN 60
             ++ A+ LMRR+PP+  E                    VDQPL++  D+  GK+++LC+YN
Sbjct:     6 LDCALDLMRRLPPQQIEKNLSDLIDLVPSLCEDLLSSVDQPLKIARDKVVGKDYLLCDYN 65

Query:    61 RDADSYRSPWSNKYHPPLEDALYPPAELRKLEIEANEVFAIYRDQYYEGGISSVYMWEDD 120
             RD DSYRSPWSNKY PPLED   P A LRKLE+EAN  F  YRD Y+EGG+SSVY+W+ D
Sbjct:    66 RDGDSYRSPWSNKYDPPLEDGAMPSARLRKLEVEANNAFDQYRDLYFEGGVSSVYLWDLD 125

Query:   121 NEGFVACFLIKK--DGSKTAQGRRGHLEEGAWDAIHVIEVAPEEEG-IARYCLTSTVMLS 177
             + GF    LIKK  DGSK  +G         WD+IHV+EV  +  G  A Y LTSTVML 
Sbjct:   126 H-GFAGVILIKKAGDGSKKIKG--------CWDSIHVVEVQEKSSGRTAHYKLTSTVMLW 176

Query:   178 LTTDHESSGTFSLSGSIRRQV 198
             L T+   SGT +L GS+ RQ+
Sbjct:   177 LQTNKSGSGTMNLGGSLTRQM 197

GO:0030036 "actin cytoskeleton organization" evidence=IEA

GO:0008290 "F-actin capping protein complex" evidence=IEA

GO:0022604 "regulation of cell morphogenesis" evidence=ISS

GO:0007010 "cytoskeleton organization" evidence=ISS

GO:0071203 "WASH complex" evidence=ISS

GO:0051693 "actin filament capping" evidence=IEA

GO:0003779 "actin binding" evidence=IEA

UNIPROTKB|A9XFX6 Capzb "F-actin capping protein beta subunit" [Sus scrofa (taxid:9823)]

 Score = 482 (174.7 bits), Expect = 6.2e-46, P = 6.2e-46
 Identities = 100/201 (49%), Positives = 126/201 (62%)

Query:     1 MEAAMGLMRRMPPKHSETXXXXXXXXXXXXXXXXXXQVDQPLQVLFDEESGKEFILCEYN 60
             ++ A+ LMRR+PP+  E                    VDQPL++  D+  GK+++LC+YN
Sbjct:     6 LDCALDLMRRLPPQQIEKNLSDLIDLVPSLCEDLLSSVDQPLKIARDKVVGKDYLLCDYN 65

Query:    61 RDADSYRSPWSNKYHPPLEDALYPPAELRKLEIEANEVFAIYRDQYYEGGISSVYMWEDD 120
             RD DSYRSPWSNKY PPLED   P A LRKLE+EAN  F  YRD Y+EGG+SSVY+W+ D
Sbjct:    66 RDGDSYRSPWSNKYDPPLEDGAMPSARLRKLEVEANNAFDQYRDLYFEGGVSSVYLWDLD 125

Query:   121 NEGFVACFLIKK--DGSKTAQGRRGHLEEGAWDAIHVIEVAPEEEG-IARYCLTSTVMLS 177
             + GF    LIKK  DGSK  +G         WD+IHV+EV  +  G  A Y LTSTVML 
Sbjct:   126 H-GFAGVILIKKAGDGSKKIKG--------CWDSIHVVEVQEKSSGRTAHYKLTSTVMLW 176

Query:   178 LTTDHESSGTFSLSGSIRRQV 198
             L T+   SGT +L GS+ RQ+
Sbjct:   177 LQTNKSGSGTMNLGGSLTRQM 197

GO:0071203 "WASH complex" evidence=IEA

GO:0030036 "actin cytoskeleton organization" evidence=IEA

GO:0008290 "F-actin capping protein complex" evidence=IEA

GO:0003779 "actin binding" evidence=IEA

UNIPROTKB|D2JYW4 CAPZB "F-actin-capping protein subunit beta" [Sus scrofa (taxid:9823)]

 Score = 482 (174.7 bits), Expect = 6.2e-46, P = 6.2e-46
 Identities = 100/201 (49%), Positives = 126/201 (62%)

Query:     1 MEAAMGLMRRMPPKHSETXXXXXXXXXXXXXXXXXXQVDQPLQVLFDEESGKEFILCEYN 60
             ++ A+ LMRR+PP+  E                    VDQPL++  D+  GK+++LC+YN
Sbjct:     6 LDCALDLMRRLPPQQIEKNLSDLIDLVPSLCEDLLSSVDQPLKIARDKVVGKDYLLCDYN 65

Query:    61 RDADSYRSPWSNKYHPPLEDALYPPAELRKLEIEANEVFAIYRDQYYEGGISSVYMWEDD 120
             RD DSYRSPWSNKY PPLED   P A LRKLE+EAN  F  YRD Y+EGG+SSVY+W+ D
Sbjct:    66 RDGDSYRSPWSNKYDPPLEDGAMPSARLRKLEVEANNAFDQYRDLYFEGGVSSVYLWDLD 125

Query:   121 NEGFVACFLIKK--DGSKTAQGRRGHLEEGAWDAIHVIEVAPEEEG-IARYCLTSTVMLS 177
             + GF    LIKK  DGSK  +G         WD+IHV+EV  +  G  A Y LTSTVML 
Sbjct:   126 H-GFAGVILIKKAGDGSKKIKG--------CWDSIHVVEVQEKSSGRTAHYKLTSTVMLW 176

Query:   178 LTTDHESSGTFSLSGSIRRQV 198
             L T+   SGT +L GS+ RQ+
Sbjct:   177 LQTNKSGSGTMNLGGSLTRQM 197

GO:0071203 "WASH complex" evidence=IEA

GO:0030863 "cortical cytoskeleton" evidence=IEA

GO:0030032 "lamellipodium assembly" evidence=IEA

GO:0030027 "lamellipodium" evidence=IEA

GO:0022604 "regulation of cell morphogenesis" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0030036 "actin cytoskeleton organization" evidence=IEA

GO:0008290 "F-actin capping protein complex" evidence=IEA

GO:0003779 "actin binding" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
P34686	CAPZB_CAEEL	No assigned EC number	0.5226	0.8068	0.6962	yes	no
Q5XI32	CAPZB_RAT	No assigned EC number	0.5422	0.8111	0.6948	yes	no
P48603	CAPZB_DROME	No assigned EC number	0.55	0.8068	0.6811	yes	no
Q9M9G7	CAPZB_ARATH	No assigned EC number	0.8366	0.8669	0.7890	yes	no
P13021	CAPZB_DICDI	No assigned EC number	0.5202	0.8240	0.7058	yes	no
P79136	CAPZB_BOVIN	No assigned EC number	0.5422	0.8111	0.6279	yes	no
Q5R507	CAPZB_PONAB	No assigned EC number	0.5422	0.8111	0.6948	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input:
	GSVIVG00005423001	SubName- Full=Chromosome undetermined scaffold_151, whole genome shotgun sequence; (256 aa)
		(Vitis vinifera)
Predicted Functional Partners:
	GSVIVG00022716001	SubName- Full=Chromosome chr14 scaffold_27, whole genome shotgun sequence; (296 aa)				•	•	•	•		0.953
	GSVIVG00038837001	SubName- Full=Chromosome chr5 scaffold_98, whole genome shotgun sequence; (197 aa)				•	•				0.689
	GSVIVG00018819001	SubName- Full=Chromosome chr12 scaffold_18, whole genome shotgun sequence; (378 aa)				•	•		•		0.660
	GSVIVG00030553001	SubName- Full=Chromosome chr1 scaffold_5, whole genome shotgun sequence; (328 aa)				•	•				0.606
	GSVIVG00006409001	SubName- Full=Chromosome chr11 scaffold_170, whole genome shotgun sequence; (183 aa)				•	•				0.558
	GSVIVG00017796001	SubName- Full=Chromosome chr17 scaffold_16, whole genome shotgun sequence; (609 aa)				•	•		•		0.555
	GSVIVG00033164001	SubName- Full=Chromosome chr5 scaffold_64, whole genome shotgun sequence; (188 aa)				•	•				0.528

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	233
pfam01115	240	pfam01115, F_actin_cap_B, F-actin capping protein,	7e-97

>gnl|CDD|144634 pfam01115, F_actin_cap_B, F-actin capping protein, beta subunit

 Score =  282 bits (723), Expect = 7e-97
 Identities = 109/200 (54%), Positives = 135/200 (67%), Gaps = 8/200 (4%)

Query: 1   MEAAMGLMRRMPPKHSETALSALLSLLPDHSSDLLSQVDQPLQVLFDEESGKEFILCEYN 60
           ++AA+ L+RR+PPK  E  L+ L+ L PD + DLLS VDQPL++  D E+GK+++ C+YN
Sbjct: 2   LDAALDLLRRLPPKKIEENLNDLIDLAPDLTEDLLSSVDQPLKIKKDSETGKDYLCCDYN 61

Query: 61  RDADSYRSPWSNKYHPPLE-DALYPPAELRKLEIEANEVFAIYRDQYYEGGISSVYMWE- 118
           RD DSYRSPWSNKY PPLE D   P   LRKLEI+ANE F +YRD YYEGG+SSVY+W+ 
Sbjct: 62  RDGDSYRSPWSNKYFPPLEADGPVPSERLRKLEIKANEAFDVYRDLYYEGGVSSVYLWDL 121

Query: 119 DDNEGFVACFLIKKDGSKTAQGRRGHLEEGAWDAIHVIEVAPEEEGIARYCLTSTVMLSL 178
           DD +GF    LIKK G             G+WD+IHV EV     G A Y LTSTV+L L
Sbjct: 122 DDEDGFAGVVLIKKAGDSGEGIS------GSWDSIHVFEVTETSSGTAHYKLTSTVILEL 175

Query: 179 TTDHESSGTFSLSGSIRRQV 198
            TD   SG  +LSGS+ RQ 
Sbjct: 176 KTDSSKSGPLNLSGSLTRQK 195

Length = 240

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	233
PF01115	242	F_actin_cap_B: F-actin capping protein, beta subun	100.0
KOG3174	275	consensus F-actin capping protein, beta subunit [C	100.0
PF01267	271	F-actin_cap_A: F-actin capping protein alpha subun	97.92
KOG0836	282	consensus F-actin capping protein, alpha subunit [	94.47

>PF01115 F_actin_cap_B: F-actin capping protein, beta subunit; InterPro: IPR001698 This entry represents a component of the WASH complex

Probab=100.00  E-value=5e-114  Score=765.12  Aligned_cols=217  Identities=54%  Similarity=0.929  Sum_probs=192.0

Q ss_pred             ChhhhhhhhcCCCccHHHHHHHHHccCcchhHHHhhcCCCceeeeeecccCceeeecccCCCCCCCCCCCCCCCCCCCC-
Q 026754            1 MEAAMGLMRRMPPKHSETALSALLSLLPDHSSDLLSQVDQPLQVLFDEESGKEFILCEYNRDADSYRSPWSNKYHPPLE-   79 (233)
Q Consensus         1 ~daaLdLlRRLpP~~ie~nl~~l~~L~Pdl~edLLssVDqPLkv~~d~~~~k~yL~CdYNRDgDSYRSPwSNkY~P~l~-   79 (233)
                      +||||||||||||++||+||++||+|+|+||+||||+|||||||++|+++||+||+||||||||||||||||||+||++ 
T Consensus         2 ~d~aLdLlRRlpP~~ie~nl~~l~~L~Pdl~edLLssVD~PLkv~~d~~~~k~yL~CdYNRDgDSYRSPwSNkY~P~~~~   81 (242)
T PF01115_consen    2 LDAALDLLRRLPPKKIEKNLSNLIDLVPDLTEDLLSSVDQPLKVARDKETGKDYLLCDYNRDGDSYRSPWSNKYYPPLEG   81 (242)
T ss_dssp             HHHHHHHHTTS-GGGHHHHHHHHHHHSGGGHHHHHHHS----EEEEETTTTEEEEESGGGEETTEEE-TTT--EES--S-
T ss_pred             hhHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHHHhCCCcceEEEchhhCCeeEeecccCCcccccCCCCcccCCCccc
Confidence            5899999999999999999999999999999999999999999999999999999999999999999999999999999 


Q ss_pred             ----CCCCCChHHHHHHHHHHHHHHHHHHhhhcCCeeeEEeeecCCC-CeeEEEEEEecCCCCcCCCCCCCCCcceeeeE
Q 026754           80 ----DALYPPAELRKLEIEANEVFAIYRDQYYEGGISSVYMWEDDNE-GFVACFLIKKDGSKTAQGRRGHLEEGAWDAIH  154 (233)
Q Consensus        80 ----dg~~PS~~LR~LEi~aN~~Fd~Yr~lYYeGGvSSVYlWdld~~-gFagvvLiKK~~~~~~~~~~~~~~~G~WDSIH  154 (233)
                          ||++||++||+||++||++||+||+||||||||||||||+|++ ||||||||||++++++.      .+|+|||||
T Consensus        82 ~~~~dg~~PS~~LR~LEi~aN~~Fd~Yr~lYyeGGvSSVYlWd~d~~~gFag~vLiKK~~~~~~~------~~g~WDSIH  155 (242)
T PF01115_consen   82 DDLEDGPVPSERLRKLEIEANEAFDIYRDLYYEGGVSSVYLWDLDDDDGFAGVVLIKKEGDPSNE------ISGSWDSIH  155 (242)
T ss_dssp             ----S-----HHHHHHHHHHHHHHHHHHHHHHSSSEEEEEEEEETT--EEEEEEEEEEEE-TGCC------EEEEEEEEE
T ss_pred             cccCCCCCChHHHHHHHHHHHHHHHHHHHHHhCCCeeEEEEEecCCCcceeEEEEEEecCCCCCC------ccceEeeeE
Confidence                9999999999999999999999999999999999999999976 89999999999666543      789999999


Q ss_pred             EEEeeecCCceeEEEEeeEEEEEeeeCCCCCceeeecceeeeecccCcC---------ccchhHHHhhHHHHhhhhhe
Q 026754          155 VIEVAPEEEGIARYCLTSTVMLSLTTDHESSGTFSLSGSIRRQVICHLN---------CYGVMFFETSWRMEFSCRLF  223 (233)
Q Consensus       155 V~EV~~~~~~~a~YklTSTV~L~l~~~~~~~g~~~LsGsltrq~e~~~~---------NiG~mIEdmE~~mR~s~~~~  223 (233)
                      ||||++..+++|||||||||||+|+++.++.|.|+||||||||+|++++         |||+|||+||++||++|++.
T Consensus       156 V~Ev~~~~~~~a~YklTSTV~L~l~~~~~~~g~~~LsGsltrq~e~~~~~~~~~~Hi~NiG~lIEdmE~~mR~~L~~V  233 (242)
T PF01115_consen  156 VFEVTESSSGTAHYKLTSTVMLSLKTNDDASGSFNLSGSLTRQTEKDLPVSDSSSHIANIGRLIEDMENKMRNLLQEV  233 (242)
T ss_dssp             EEEEEEETTSEEEEEEEEEEEEEEEEEESSSSEEEEEEEEEEEEEEEEE-SSSS-HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             EEEEEecCCCeEEEEEEEEEEEEEecCCCCCceEeecceeehhhccccccCCCchHHHHHHHHHHHHHHHHHHHHHHH
Confidence            9999966666999999999999999998899999999999999999997         99999999999999999864

The WASH complex is present at the surface of endosomes and recruits and activates the Arp2/3 complex to induce actin polymerisation. The WASH complex plays a key role in the fission of tubules that serve as transport intermediates during endosome sorting []. The WASH complex's subunit structure: F-actin-capping protein subunit alpha (CAPZA1, CAPZA2 or CAPZA3), F-actin-capping protein subunit beta (CAPZB), WASH (WASH1, WASH2P, WASH3P, WASH4P, WASH5P or WASH6P), FAM21 (FAM21A, FAM21B or FAM21C), KIAA1033, KIAA0196 (strumpellin) and CCDC53. The actin filament system, a prominent part of the cytoskeleton in eukaryotic cells, is both a static structure and a dynamic network that can undergo rearrangements: it is thought to be involved in processes such as cell movement and phagocytosis [], as well as muscle contraction. The F-actin capping protein binds in a calcium-independent manner to the fast growing ends of actin filaments (barbed end) thereby blocking the exchange of subunits at these ends. Unlike gelsolin (see IPR007122 from INTERPRO) and severin this protein does not sever actin filaments. The F-actin capping protein is a heterodimer composed of two unrelated subunits: alpha and beta. Neither of the subunits shows sequence similarity to other filament-capping proteins []. The beta subunit is a protein of about 280 amino acid residues whose sequence is well conserved in eukaryotic species [].; GO: 0003779 actin binding, 0030036 actin cytoskeleton organization, 0005737 cytoplasm, 0008290 F-actin capping protein complex; PDB: 3AAE_D 3LK4_Q 2KXP_B 2KZ7_B 3AA1_B 3LK2_B 3AA7_B 3AAA_B 1IZN_B 3AA0_B ....

>KOG3174 consensus F-actin capping protein, beta subunit [Cytoskeleton]

Probab=100.00  E-value=8.8e-103  Score=693.82  Aligned_cols=216  Identities=51%  Similarity=0.848  Sum_probs=207.7

Q ss_pred             ChhhhhhhhcCCCccHHHHHHHHHccCcchhHHHhhcCCCceeeeeecccCceeeecccCCCCCCCCCCCCCCCCCCCCC
Q 026754            1 MEAAMGLMRRMPPKHSETALSALLSLLPDHSSDLLSQVDQPLQVLFDEESGKEFILCEYNRDADSYRSPWSNKYHPPLED   80 (233)
Q Consensus         1 ~daaLdLlRRLpP~~ie~nl~~l~~L~Pdl~edLLssVDqPLkv~~d~~~~k~yL~CdYNRDgDSYRSPwSNkY~P~l~d   80 (233)
                      +||||||||||||++||+||++||+|+|+|||||||||||||||++|+++||+||+||||||||||||||||+|+||++|
T Consensus         6 lD~ALDLmRrLpPqqieKnL~nLIdL~P~L~edLLsSVdqplKia~dke~g~~yllcDynrdgDsyRsPwsnsy~pPled   85 (275)
T KOG3174|consen    6 LDCALDLMRRLPPQQIEKNLSNLIDLAPHLCEDLLSSVDQPLKIARDKESGKQYLLCDYNRDGDSYRSPWSNSYDPPLED   85 (275)
T ss_pred             HHHHHHHHhcCCHHHHHHHHHHHHHhchHHHHHHHhhcccceeehhhhhcCCeeeeeecCCCcccccCCCCcccCCcccc
Confidence            69999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCChHHHHHHHHHHHHHHHHHHhhhcCCeeeEEeeecCCCCeeEEEEEEecCCCCcCCCCCCCCCcceeeeEEEEeee
Q 026754           81 ALYPPAELRKLEIEANEVFAIYRDQYYEGGISSVYMWEDDNEGFVACFLIKKDGSKTAQGRRGHLEEGAWDAIHVIEVAP  160 (233)
Q Consensus        81 g~~PS~~LR~LEi~aN~~Fd~Yr~lYYeGGvSSVYlWdld~~gFagvvLiKK~~~~~~~~~~~~~~~G~WDSIHV~EV~~  160 (233)
                      |++||++||+||+.||.||++||++||||||||||+||++++||||+|||||++++.+.      ..|||||||||||++
T Consensus        86 g~~Psd~lrklei~aN~af~~yrdly~egGvssVylwdld~~gfag~vlikK~~~~~~~------~~g~wdsIhvie~~~  159 (275)
T KOG3174|consen   86 GVYPSDRLRKLEIEANLAFRSYRDLYYEGGVSSVYLWDLDFGGFAGVVLIKKAGDGHKN------IVGCWDSIHVIEVTE  159 (275)
T ss_pred             CCCcHHHHHHHHHHHHHHHHHHhHHheecCcceEEEEeccCCCcccceEEeeccCCCCC------cccceeeeEEEEEec
Confidence            99999999999999999999999999999999999999999999999999999988765      679999999999996


Q ss_pred             c-CCceeEEEEeeEEEEEeeeCCCCC-ceeeecceeeeecccCcC---------ccchhHHHhhHHHHhhhhh
Q 026754          161 E-EEGIARYCLTSTVMLSLTTDHESS-GTFSLSGSIRRQVICHLN---------CYGVMFFETSWRMEFSCRL  222 (233)
Q Consensus       161 ~-~~~~a~YklTSTV~L~l~~~~~~~-g~~~LsGsltrq~e~~~~---------NiG~mIEdmE~~mR~s~~~  222 (233)
                      + +.+++|||||||||||+++.+..+ |.|+|+|+||||+|++.+         |+|+|||+||++||+.+.+
T Consensus       160 ~~~~~s~~y~lTSTi~l~l~~~K~~s~~~mnl~g~Ltrq~e~d~~v~~~~tHian~gklve~~et~mr~~l~~  232 (275)
T KOG3174|consen  160 ETSLRSAHYKLTSTIMLWLSTTKNESLGAMNLGGSLTRQTEKDVAVDDSRTHIANQGKLVEDMETKMRNLLNE  232 (275)
T ss_pred             ccccceeEEEeeeEEEEEecCCCccchhhhhhhhHhhhhhhcccccccccHHHHHHHHHHHHHHHHHHHHHHH
Confidence            4 578899999999999998887766 999999999999999887         9999999999999999875

>PF01267 F-actin_cap_A: F-actin capping protein alpha subunit; InterPro: IPR002189 This entry represents a component of the WASH complex

Probab=97.92  E-value=5.8e-05  Score=68.61  Aligned_cols=203  Identities=18%  Similarity=0.278  Sum_probs=120.7

Q ss_pred             hhhhhhhcCCCccHHHHHHHHHccCcc--hh-HHHhh-----cCCCceeeeeecccCceeeecccCCC-CCCCCCCCCCC
Q 026754            3 AAMGLMRRMPPKHSETALSALLSLLPD--HS-SDLLS-----QVDQPLQVLFDEESGKEFILCEYNRD-ADSYRSPWSNK   73 (233)
Q Consensus         3 aaLdLlRRLpP~~ie~nl~~l~~L~Pd--l~-edLLs-----sVDqPLkv~~d~~~~k~yL~CdYNRD-gDSYRSPwSNk   73 (233)
                      .|-+++..=||-++.+-+++|..|+++  +. +.+..     .++|-..|..+ ..+..+|.|.||+. ++.|==|=+++
T Consensus         5 ii~~fl~~aPPGE~~~V~~Dlr~l~~dd~~~~~~i~~a~~~yn~~q~~~v~~~-~~~~~viis~~n~~~~~ry~Dp~~~~   83 (271)
T PF01267_consen    5 IISSFLLQAPPGEFNEVFNDLRTLLGDDSLLKEGIAEAFEQYNEEQFIPVKLP-GSDHKVIISKYNKLGGNRYFDPRSKK   83 (271)
T ss_dssp             HHHHHHHT--TT-HHHHHHHHHHHHT-HHHHHHHSHHHHHHHHHHTTEEE--T-TSSS-EEE-GGGBESTTEEEETTTTE
T ss_pred             HHHHHHHcCCCccHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHCcEEEEeC-CCCcceEEecccccCCCeEEEeccCc
Confidence            466788889999999999999999998  22 22222     24555555543 33578999999999 44443333332


Q ss_pred             ---CCCC------CCCCCCCChHHHHHHHHHHHHHHHHHHhhhcCCeeeEEeeecCCC-CeeEEEEEEecCCCCcCCCCC
Q 026754           74 ---YHPP------LEDALYPPAELRKLEIEANEVFAIYRDQYYEGGISSVYMWEDDNE-GFVACFLIKKDGSKTAQGRRG  143 (233)
Q Consensus        74 ---Y~P~------l~dg~~PS~~LR~LEi~aN~~Fd~Yr~lYYeGGvSSVYlWdld~~-gFagvvLiKK~~~~~~~~~~~  143 (233)
                         |+.-      .++...|++.+-.+-.+..+++..|.+-+|..|+++||-=+.++. .++-|+.=.|- ++.+     
T Consensus        84 ~F~~DHl~~~~~d~e~~~~~~~~~e~~R~~l~~~l~~Yv~~hy~~g~~~V~~~~~~~~~~l~i~I~~~k~-n~~N-----  157 (271)
T PF01267_consen   84 SFSVDHLKQKASDVEPYEPPDEELESYRDALDKALEKYVKEHYPSGACGVYPKSEEDKETLVICIVAHKY-NPKN-----  157 (271)
T ss_dssp             EEEEETTTTEEEEEEE-----TSSHHHHHHHHHHHHHHHHHHSTTEEEEEEEEEETTEEEEEEEEEEEEE-EGGG-----
T ss_pred             EEEEeeeccEEccCccccccccchHHHHHHHHHHHHHHHHHhccCceeEEEeccCCCccEEEEEEEeccc-cccc-----
Confidence               2220      012224566677777788899999999999889999998887642 26666655443 3333     


Q ss_pred             CCCCcceeeeEEEEeeecCCceeEEEEeeEEEEEeeeCCCCCceeeecce--------eeeecccCcCccchhHHHhhHH
Q 026754          144 HLEEGAWDAIHVIEVAPEEEGIARYCLTSTVMLSLTTDHESSGTFSLSGS--------IRRQVICHLNCYGVMFFETSWR  215 (233)
Q Consensus       144 ~~~~G~WDSIHV~EV~~~~~~~a~YklTSTV~L~l~~~~~~~g~~~LsGs--------ltrq~e~~~~NiG~mIEdmE~~  215 (233)
                       .-.|.|-|.=+|.+. .++     .|+.+|-+.+-==.+  |.+.|..+        .+.+ ++.+.+|=+.|++.|++
T Consensus       158 -fwnG~WrS~w~~~~~-~~~-----~l~G~I~V~vHYyEd--GNVqL~~~k~~~~~~~~~~~-~~~a~~iv~~I~~~E~~  227 (271)
T PF01267_consen  158 -FWNGRWRSEWTVDFS-SSG-----TLSGKIKVQVHYYED--GNVQLNSSKEVSETVSVSND-EQFASDIVKAIKEAENK  227 (271)
T ss_dssp             -TEEEEEEEEEEEEEE-TTE-----EEEEEEEEEEEE-TT--EEEEEEEEEEEEEEEE--SH-HHHHHHHHHHHHHHHHH
T ss_pred             -ccCceeeEEEEEecC-CCc-----eEEEEEEeeEEEEee--cEEEEEEccccceeeccCCh-hhhHHHHHHHHHHHHHH
Confidence             257999999999974 221     556666555422111  33333322        1111 22334788899999998


Q ss_pred             HHhhhhh
Q 026754          216 MEFSCRL  222 (233)
Q Consensus       216 mR~s~~~  222 (233)
                      +-.+|-+
T Consensus       228 ~q~~L~e  234 (271)
T PF01267_consen  228 YQTSLNE  234 (271)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHHH
Confidence            8877754

The WASH complex is present at the surface of endosomes and recruits and activates the Arp2/3 complex to induce actin polymerisation. The WASH complex plays a key role in the fission of tubules that serve as transport intermediates during endosome sorting []. The WASH complex's subunit structure: F-actin-capping protein subunit alpha (CAPZA1, CAPZA2 or CAPZA3), F-actin-capping protein subunit beta (CAPZB), WASH (WASH1, WASH2P, WASH3P, WASH4P, WASH5P or WASH6P), FAM21 (FAM21A, FAM21B or FAM21C), KIAA1033, KIAA0196 (strumpellin) and CCDC53. The actin filament system, a prominent part of the cytoskeleton in eukaryotic cells, is both a static structure and a dynamic network that can undergo rearrangements: it is thought to be involved in processes such as cell movement and phagocytosis [], as well as muscle contraction. The F-actin capping protein binds in a calcium-independent manner to the fast growing ends of actin filaments (barbed end) thereby blocking the exchange of subunits at these ends. Unlike gelsolin and severin this protein does not sever actin filaments. The F-actin capping protein is a heterodimer composed of two unrelated subunits: alpha and beta (see IPR001698 from INTERPRO). Neither of the subunits shows sequence similarity to other filament-capping proteins []. The alpha subunit is a protein of about 268 to 286 amino acid residues whose sequence is well conserved in eukaryotic species [].; GO: 0003779 actin binding, 0030036 actin cytoskeleton organization, 0008290 F-actin capping protein complex; PDB: 1MQ1_D 1MWN_X 2KBM_Y 2KZ7_A 3AAE_C 3AA6_A 3LK4_G 1IZN_A 3AA7_A 3AAA_A ....

>KOG0836 consensus F-actin capping protein, alpha subunit [Cytoskeleton]

Probab=94.47  E-value=1  Score=42.05  Aligned_cols=196  Identities=16%  Similarity=0.251  Sum_probs=118.0

Q ss_pred             hhhhhhhcCCCccHHHHHHHHHccCcchh------HHHh--hcCCCceeeeeecccCceeeecccCCCCCCCCCCCCCCC
Q 026754            3 AAMGLMRRMPPKHSETALSALLSLLPDHS------SDLL--SQVDQPLQVLFDEESGKEFILCEYNRDADSYRSPWSNKY   74 (233)
Q Consensus         3 aaLdLlRRLpP~~ie~nl~~l~~L~Pdl~------edLL--ssVDqPLkv~~d~~~~k~yL~CdYNRDgDSYRSPwSNkY   74 (233)
                      .|-++++.=||-.+.+-.++|+.|.-+=.      .+-+  =.+||=..|.-+-. ..+=|...||+-|++       +|
T Consensus        12 ii~kfi~~APPGEfneVf~Dlr~ll~~d~l~~e~~~~A~~qYn~~~~vpv~i~g~-~~~viIS~~n~lg~~-------rf   83 (282)
T KOG0836|consen   12 IISKFILHAPPGEFNEVFNDLRLLLSNDELLKEAAHEAFAQYNVDQMVPVEIDGG-ANQVIISEYNDLGNN-------RF   83 (282)
T ss_pred             HHHHHHhhCCChHHHHHHHHHHHHhcchhHHHHHHHHHHHHhchhcceeEecCCC-CCceEEecccccCcc-------ee
Confidence            46788999999999999999999874311      1111  24565443433321 257899999999963       33


Q ss_pred             CCCCCC---------------CCCC--ChHHHHHHHHHHHHHHHHHHhhhcCCeeeEEeeecCCC--CeeEEEEEEecCC
Q 026754           75 HPPLED---------------ALYP--PAELRKLEIEANEVFAIYRDQYYEGGISSVYMWEDDNE--GFVACFLIKKDGS  135 (233)
Q Consensus        75 ~P~l~d---------------g~~P--S~~LR~LEi~aN~~Fd~Yr~lYYeGGvSSVYlWdld~~--gFagvvLiKK~~~  135 (233)
                      +-|-..               .+++  ...........-..-..|-.-+|-||+|.| +.-.++.  .|..|+-=- .-+
T Consensus        84 ~Dp~~k~sFk~dhl~kea~d~qp~~~~~~~~E~~r~~l~~~l~~y~~~hy~~~~t~~-vkk~dg~~~~l~icIesh-~y~  161 (282)
T KOG0836|consen   84 LDPVNKKSFKYDHLRKEAEDVQPYEAEINIIEIWRYALDAQLKKYVSDHYPKGVTFV-VKKSDGEQETLTICIESH-QYQ  161 (282)
T ss_pred             cchhhceeeeHHHHHHHhccCCCcchhhhhhHHHHHHHHHHHHHHHHhccCCCceEE-EeccCCcceEEEEEEeec-ccC
Confidence            332211               1111  111122222444567789999999999988 7766632  244444322 222


Q ss_pred             CCcCCCCCCCCCcceeeeEEEEeee-c--CCc---eeEEEEeeEEEEEeeeCCCCCceeeecceeeeecc-cCcCccchh
Q 026754          136 KTAQGRRGHLEEGAWDAIHVIEVAP-E--EEG---IARYCLTSTVMLSLTTDHESSGTFSLSGSIRRQVI-CHLNCYGVM  208 (233)
Q Consensus       136 ~~~~~~~~~~~~G~WDSIHV~EV~~-~--~~~---~a~YklTSTV~L~l~~~~~~~g~~~LsGsltrq~e-~~~~NiG~m  208 (233)
                      +      .|.=.|.|-|+-.|.|++ .  .|+   ++||-=..-|-|.-..  +-.-.+++|      .+ +.+.-+=++
T Consensus       162 p------kNfwNG~WRS~w~~~v~~~~~l~G~i~vqvHYyEdGNV~l~s~K--d~qds~~vs------n~~q~a~e~~~i  227 (282)
T KOG0836|consen  162 P------KNFWNGRWRSEWNYDVQPTTELKGRIKVQVHYYEDGNVQLVSSK--DIQDSLTVS------NEVQTAKEFIKI  227 (282)
T ss_pred             c------ccccCCceeeeeeeccCchheeeeEEEEEEEEEecCcEEEEecC--cchhhheee------chHHHHHHHHHH
Confidence            2      234679999999999986 1  233   2777766666555332  211223333      33 333467889


Q ss_pred             HHHhhHHHHhhhhh
Q 026754          209 FFETSWRMEFSCRL  222 (233)
Q Consensus       209 IEdmE~~mR~s~~~  222 (233)
                      ||+.|+..-.++.+
T Consensus       228 I~~~Eneyq~ai~e  241 (282)
T KOG0836|consen  228 IEEAENEYQAAISE  241 (282)
T ss_pred             HHHHHHHHHHHHHH
Confidence            99999999988764

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	233
2kxp_B	270	Solution Nmr Structure Of V-1 Bound To Capping Prot		6e-50
3aa0_B	244	Crystal Structure Of Actin Capping Protein In Compl		8e-50
3lk2_B	243	Crystal Structure Of Capz Bound To The Uncapping Mo		8e-50
1izn_B	277	Crystal Structure Of Actin Filament Capping Protein		9e-50
4akr_B	290	Crystal Structure Of The Cytoplasmic Actin Capping		4e-49

>pdb|2KXP|B Chain B, Solution Nmr Structure Of V-1 Bound To Capping Protein (Cp) Length = 270

Iteration: 1
 Score =  193 bits (491), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 100/201 (49%), Positives = 126/201 (62%), Gaps = 12/201 (5%)
Query: 1   MEAAMGLMRRMPPKHSETXXXXXXXXXXXXXXXXXXQVDQPLQVLFDEESGKEFILCEYN 60
           ++ A+ LMRR+PP+  E                    VDQPL++  D+  GK+++LC+YN
Sbjct: 5   LDCALDLMRRLPPQQIEKNLSDLIDLVPSLCEDLLSSVDQPLKIARDKVVGKDYLLCDYN 64
Query: 61  RDADSYRSPWSNKYHPPLEDALYPPAELRKLEIEANEVFAIYRDQYYEGGISSVYMWEDD 120
           RD DSYRSPWSNKY PPLED   P A LRKLE+EAN  F  YRD Y+EGG+SSVY+W+ D
Sbjct: 65  RDGDSYRSPWSNKYDPPLEDGAMPSARLRKLEVEANNAFDQYRDLYFEGGVSSVYLWDLD 124
Query: 121 NEGFVACFLIKK--DGSKTAQGRRGHLEEGAWDAIHVIEVAPEEEG-IARYCLTSTVMLS 177
           + GF    LIKK  DGSK  +        G WD+IHV+EV  +  G  A Y LTSTVML 
Sbjct: 125 H-GFAGVILIKKAGDGSKKIK--------GCWDSIHVVEVQEKSSGRTAHYKLTSTVMLW 175
Query: 178 LTTDHESSGTFSLSGSIRRQV 198
           L T+   SGT +L GS+ RQ+
Sbjct: 176 LQTNKTGSGTMNLGGSLTRQM 196

>pdb|3AA0|B Chain B, Crystal Structure Of Actin Capping Protein In Complex With The Cp- Binding Motif Derived From Carmil Length = 244

Iteration: 1
 Score =  193 bits (490), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 100/201 (49%), Positives = 126/201 (62%), Gaps = 12/201 (5%)
Query: 1   MEAAMGLMRRMPPKHSETXXXXXXXXXXXXXXXXXXQVDQPLQVLFDEESGKEFILCEYN 60
           ++ A+ LMRR+PP+  E                    VDQPL++  D+  GK+++LC+YN
Sbjct: 6   LDCALDLMRRLPPQQIEKNLSDLIDLVPSLCEDLLSSVDQPLKIARDKVVGKDYLLCDYN 65
Query: 61  RDADSYRSPWSNKYHPPLEDALYPPAELRKLEIEANEVFAIYRDQYYEGGISSVYMWEDD 120
           RD DSYRSPWSNKY PPLED   P A LRKLE+EAN  F  YRD Y+EGG+SSVY+W+ D
Sbjct: 66  RDGDSYRSPWSNKYDPPLEDGAMPSARLRKLEVEANNAFDQYRDLYFEGGVSSVYLWDLD 125
Query: 121 NEGFVACFLIKK--DGSKTAQGRRGHLEEGAWDAIHVIEVAPEEEG-IARYCLTSTVMLS 177
           + GF    LIKK  DGSK  +        G WD+IHV+EV  +  G  A Y LTSTVML 
Sbjct: 126 H-GFAGVILIKKAGDGSKKIK--------GCWDSIHVVEVQEKSSGRTAHYKLTSTVMLW 176
Query: 178 LTTDHESSGTFSLSGSIRRQV 198
           L T+   SGT +L GS+ RQ+
Sbjct: 177 LQTNKTGSGTMNLGGSLTRQM 197

>pdb|3LK2|B Chain B, Crystal Structure Of Capz Bound To The Uncapping Motif From Carmil Length = 243

Iteration: 1
 Score =  193 bits (490), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 100/201 (49%), Positives = 126/201 (62%), Gaps = 12/201 (5%)
Query: 1   MEAAMGLMRRMPPKHSETXXXXXXXXXXXXXXXXXXQVDQPLQVLFDEESGKEFILCEYN 60
           ++ A+ LMRR+PP+  E                    VDQPL++  D+  GK+++LC+YN
Sbjct: 6   LDCALDLMRRLPPQQIEKNLSDLIDLVPSLCEDLLSSVDQPLKIARDKVVGKDYLLCDYN 65
Query: 61  RDADSYRSPWSNKYHPPLEDALYPPAELRKLEIEANEVFAIYRDQYYEGGISSVYMWEDD 120
           RD DSYRSPWSNKY PPLED   P A LRKLE+EAN  F  YRD Y+EGG+SSVY+W+ D
Sbjct: 66  RDGDSYRSPWSNKYDPPLEDGAMPSARLRKLEVEANNAFDQYRDLYFEGGVSSVYLWDLD 125
Query: 121 NEGFVACFLIKK--DGSKTAQGRRGHLEEGAWDAIHVIEVAPEEEG-IARYCLTSTVMLS 177
           + GF    LIKK  DGSK  +        G WD+IHV+EV  +  G  A Y LTSTVML 
Sbjct: 126 H-GFAGVILIKKAGDGSKKIK--------GCWDSIHVVEVQEKSSGRTAHYKLTSTVMLW 176
Query: 178 LTTDHESSGTFSLSGSIRRQV 198
           L T+   SGT +L GS+ RQ+
Sbjct: 177 LQTNKTGSGTMNLGGSLTRQM 197

>pdb|1IZN|B Chain B, Crystal Structure Of Actin Filament Capping Protein Capz Length = 277

Iteration: 1
 Score =  193 bits (490), Expect = 9e-50,   Method: Compositional matrix adjust.
 Identities = 100/201 (49%), Positives = 126/201 (62%), Gaps = 12/201 (5%)
Query: 1   MEAAMGLMRRMPPKHSETXXXXXXXXXXXXXXXXXXQVDQPLQVLFDEESGKEFILCEYN 60
           ++ A+ LMRR+PP+  E                    VDQPL++  D+  GK+++LC+YN
Sbjct: 6   LDCALDLMRRLPPQQIEKNLSDLIDLVPSLCEDLLSSVDQPLKIARDKVVGKDYLLCDYN 65
Query: 61  RDADSYRSPWSNKYHPPLEDALYPPAELRKLEIEANEVFAIYRDQYYEGGISSVYMWEDD 120
           RD DSYRSPWSNKY PPLED   P A LRKLE+EAN  F  YRD Y+EGG+SSVY+W+ D
Sbjct: 66  RDGDSYRSPWSNKYDPPLEDGAMPSARLRKLEVEANNAFDQYRDLYFEGGVSSVYLWDLD 125
Query: 121 NEGFVACFLIKK--DGSKTAQGRRGHLEEGAWDAIHVIEVAPEEEG-IARYCLTSTVMLS 177
           + GF    LIKK  DGSK  +        G WD+IHV+EV  +  G  A Y LTSTVML 
Sbjct: 126 H-GFAGVILIKKAGDGSKKIK--------GCWDSIHVVEVQEKSSGRTAHYKLTSTVMLW 176
Query: 178 LTTDHESSGTFSLSGSIRRQV 198
           L T+   SGT +L GS+ RQ+
Sbjct: 177 LQTNKTGSGTMNLGGSLTRQM 197

>pdb|4AKR|B Chain B, Crystal Structure Of The Cytoplasmic Actin Capping Protein Cap32_34 From Dictyostelium Discoideum Length = 290

Iteration: 1
 Score =  191 bits (484), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 93/198 (46%), Positives = 128/198 (64%), Gaps = 6/198 (3%)
Query: 1   MEAAMGLMRRMPPKHSETXXXXXXXXXXXXXXXXXXQVDQPLQVLFDEESGKEFILCEYN 60
           +   + LMRR+PP   E                    +DQPL+V +D  S K+++LC+YN
Sbjct: 24  LSCCLDLMRRLPPSQIEDNLAGLLDLVPDLTEDLLSSIDQPLKVAYDAVSKKDYLLCDYN 83
Query: 61  RDADSYRSPWSNKYHPPLEDALYPPAELRKLEIEANEVFAIYRDQYYEGGISSVYMWE-D 119
           RDADSYRSPWSNKY PPL  A YP ++LR +E++ANE+F IY + Y+EGG+SSVY W+ D
Sbjct: 84  RDADSYRSPWSNKYDPPLSGACYPSSKLRDIEVQANEIFEIYLNLYFEGGVSSVYCWDLD 143
Query: 120 DNEGFVACFLIKKDGSKTAQGRRGHLEEGAWDAIHVIEVAPEEEGIARYCLTSTVMLSLT 179
           DN  F A  L+KK      Q ++G    G WD+IHV+EV   ++  A Y LTSTVMLS+ 
Sbjct: 144 DN--FAAVVLMKK---TQDQSKKGQPMRGTWDSIHVVEVKLGKKDKAVYKLTSTVMLSIE 198
Query: 180 TDHESSGTFSLSGSIRRQ 197
           TD++++G  +L+GS+ RQ
Sbjct: 199 TDNDNTGKVNLAGSLTRQ 216

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	233
4akr_B	290	F-actin-capping protein subunit beta; actin-bindin	6e-96
3aa0_B	244	F-actin-capping protein subunit beta isoforms 1 A;	6e-95
3lk4_B	277	F-actin-capping protein subunit beta isoforms 1 an	9e-95

>4akr_B F-actin-capping protein subunit beta; actin-binding protein; 2.20A {Dictyostelium discoideum} Length = 290

 Score =  281 bits (720), Expect = 6e-96
 Identities = 101/198 (51%), Positives = 140/198 (70%), Gaps = 4/198 (2%)

Query: 1   MEAAMGLMRRMPPKHSETALSALLSLLPDHSSDLLSQVDQPLQVLFDEESGKEFILCEYN 60
           +   + LMRR+PP   E  L+ LL L+PD + DLLS +DQPL+V +D  S K+++LC+YN
Sbjct: 24  LSCCLDLMRRLPPSQIEDNLAGLLDLVPDLTEDLLSSIDQPLKVAYDAVSKKDYLLCDYN 83

Query: 61  RDADSYRSPWSNKYHPPLEDALYPPAELRKLEIEANEVFAIYRDQYYEGGISSVYMWEDD 120
           RDADSYRSPWSNKY PPL  A YP ++LR +E++ANE+F IY + Y+EGG+SSVY W+ D
Sbjct: 84  RDADSYRSPWSNKYDPPLSGACYPSSKLRDIEVQANEIFEIYLNLYFEGGVSSVYCWDLD 143

Query: 121 NEGFVACFLIKKDGSKTAQGRRGHLEEGAWDAIHVIEVAPEEEGIARYCLTSTVMLSLTT 180
            + F A  L+KK      Q ++G    G WD+IHV+EV   ++  A Y LTSTVMLS+ T
Sbjct: 144 -DNFAAVVLMKKTQD---QSKKGQPMRGTWDSIHVVEVKLGKKDKAVYKLTSTVMLSIET 199

Query: 181 DHESSGTFSLSGSIRRQV 198
           D++++G  +L+GS+ RQ 
Sbjct: 200 DNDNTGKVNLAGSLTRQD 217

>3aa0_B F-actin-capping protein subunit beta isoforms 1 A; actin capping protein, barbed END regulation, carmil family conformational change; 1.70A {Gallus gallus} PDB: 3aa1_B* 3aa6_B 3aa7_B* 2kxp_B 3lk2_B Length = 244

 Score =  276 bits (708), Expect = 6e-95
 Identities = 106/199 (53%), Positives = 135/199 (67%), Gaps = 8/199 (4%)

Query: 1   MEAAMGLMRRMPPKHSETALSALLSLLPDHSSDLLSQVDQPLQVLFDEESGKEFILCEYN 60
           ++ A+ LMRR+PP+  E  LS L+ L+P    DLLS VDQPL++  D+  GK+++LC+YN
Sbjct: 6   LDCALDLMRRLPPQQIEKNLSDLIDLVPSLCEDLLSSVDQPLKIARDKVVGKDYLLCDYN 65

Query: 61  RDADSYRSPWSNKYHPPLEDALYPPAELRKLEIEANEVFAIYRDQYYEGGISSVYMWEDD 120
           RD DSYRSPWSNKY PPLED   P A LRKLE+EAN  F  YRD Y+EGG+SSVY+W+ D
Sbjct: 66  RDGDSYRSPWSNKYDPPLEDGAMPSARLRKLEVEANNAFDQYRDLYFEGGVSSVYLWDLD 125

Query: 121 NEGFVACFLIKKDGSKTAQGRRGHLEEGAWDAIHVIEVAPEEEG-IARYCLTSTVMLSLT 179
             GF    LIKK G  + +       +G WD+IHV+EV  +  G  A Y LTSTVML L 
Sbjct: 126 -HGFAGVILIKKAGDGSKK------IKGCWDSIHVVEVQEKSSGRTAHYKLTSTVMLWLQ 178

Query: 180 TDHESSGTFSLSGSIRRQV 198
           T+   SGT +L GS+ RQ+
Sbjct: 179 TNKTGSGTMNLGGSLTRQM 197

>3lk4_B F-actin-capping protein subunit beta isoforms 1 and 2; CAPZ, CD2AP, actin filaments, uncapping, actin-filament regulators, protein-protein comple, actin capping, actin- binding; 1.99A {Gallus gallus} PDB: 2kz7_B 3aaa_B 3aae_B 3lk3_B 1izn_B Length = 277

 Score =  277 bits (711), Expect = 9e-95
 Identities = 106/199 (53%), Positives = 135/199 (67%), Gaps = 8/199 (4%)

Query: 1   MEAAMGLMRRMPPKHSETALSALLSLLPDHSSDLLSQVDQPLQVLFDEESGKEFILCEYN 60
           ++ A+ LMRR+PP+  E  LS L+ L+P    DLLS VDQPL++  D+  GK+++LC+YN
Sbjct: 6   LDCALDLMRRLPPQQIEKNLSDLIDLVPSLCEDLLSSVDQPLKIARDKVVGKDYLLCDYN 65

Query: 61  RDADSYRSPWSNKYHPPLEDALYPPAELRKLEIEANEVFAIYRDQYYEGGISSVYMWEDD 120
           RD DSYRSPWSNKY PPLED   P A LRKLE+EAN  F  YRD Y+EGG+SSVY+W+ D
Sbjct: 66  RDGDSYRSPWSNKYDPPLEDGAMPSARLRKLEVEANNAFDQYRDLYFEGGVSSVYLWDLD 125

Query: 121 NEGFVACFLIKKDGSKTAQGRRGHLEEGAWDAIHVIEVAPEEEG-IARYCLTSTVMLSLT 179
             GF    LIKK G  + +       +G WD+IHV+EV  +  G  A Y LTSTVML L 
Sbjct: 126 -HGFAGVILIKKAGDGSKK------IKGCWDSIHVVEVQEKSSGRTAHYKLTSTVMLWLQ 178

Query: 180 TDHESSGTFSLSGSIRRQV 198
           T+   SGT +L GS+ RQ+
Sbjct: 179 TNKTGSGTMNLGGSLTRQM 197

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	233
3lk4_B	277	F-actin-capping protein subunit beta isoforms 1 an	100.0
4akr_B	290	F-actin-capping protein subunit beta; actin-bindin	100.0
3aa0_B	244	F-actin-capping protein subunit beta isoforms 1 A;	100.0
3aa0_A	286	F-actin-capping protein subunit alpha-1; actin cap	100.0
4akr_A	281	F-actin-capping protein subunit alpha; actin-bindi	98.34

>3lk4_B F-actin-capping protein subunit beta isoforms 1 and 2; CAPZ, CD2AP, actin filaments, uncapping, actin-filament regulators, protein-protein comple, actin capping, actin- binding; 1.99A {Gallus gallus} PDB: 2kz7_B 3aaa_B 3aae_B 3lk3_B 1izn_B

Probab=100.00  E-value=1.6e-115  Score=784.46  Aligned_cols=216  Identities=49%  Similarity=0.855  Sum_probs=205.8

Q ss_pred             ChhhhhhhhcCCCccHHHHHHHHHccCcchhHHHhhcCCCceeeeeecccCceeeecccCCCCCCCCCCCCCCCCCCCCC
Q 026754            1 MEAAMGLMRRMPPKHSETALSALLSLLPDHSSDLLSQVDQPLQVLFDEESGKEFILCEYNRDADSYRSPWSNKYHPPLED   80 (233)
Q Consensus         1 ~daaLdLlRRLpP~~ie~nl~~l~~L~Pdl~edLLssVDqPLkv~~d~~~~k~yL~CdYNRDgDSYRSPwSNkY~P~l~d   80 (233)
                      +||||||||||||++||+||++||+|+|+||+||||+|||||||++|+++||+||+||||||||||||||||+|+||++|
T Consensus         6 ~daaLdLlRRLpP~~ie~nl~~l~~L~P~L~edLLssVDqPLki~~d~~~~k~yL~CDYNRDgDSYRSPwSNkY~Ppl~d   85 (277)
T 3lk4_B            6 LDCALDLMRRLPPQQIEKNLSDLIDLVPSLCEDLLSSVDQPLKIARDKVVGKDYLLCDYNRDGDSYRSPWSNKYDPPLED   85 (277)
T ss_dssp             HHHHHHHHTTSCGGGHHHHHHHHHHHCGGGHHHHHHHSCCCCEEEEETTTTEEEEECGGGEETTEEECTTTCCEESCCSS
T ss_pred             HHHHHHHHhhCCHHHHHHHHHHHHhhChHhHHHHHHhCCcCceEeEccccCCeeEeecccCCCccccCCCcCCcCCCCcC
Confidence            58999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCChHHHHHHHHHHHHHHHHHHhhhcCCeeeEEeeecCCCCeeEEEEEEecCCCCcCCCCCCCCCcceeeeEEEEeee
Q 026754           81 ALYPPAELRKLEIEANEVFAIYRDQYYEGGISSVYMWEDDNEGFVACFLIKKDGSKTAQGRRGHLEEGAWDAIHVIEVAP  160 (233)
Q Consensus        81 g~~PS~~LR~LEi~aN~~Fd~Yr~lYYeGGvSSVYlWdld~~gFagvvLiKK~~~~~~~~~~~~~~~G~WDSIHV~EV~~  160 (233)
                      |++||++||+|||+||++||+||+||||||||||||||+|+ ||||||||||++++++.      .+|+|||||||||++
T Consensus        86 g~~PS~~LRkLEi~aN~aFd~Yr~lYYeGGvSSVYlWdld~-gFagvvLiKK~~~~~~~------~~G~WDSIHV~Ev~~  158 (277)
T 3lk4_B           86 GAMPSARLRKLEVEANNAFDQYRDLYFEGGVSSVYLWDLDH-GFAGVILIKKAGDGSKK------IKGCWDSIHVVEVQE  158 (277)
T ss_dssp             CCCCCHHHHHHHHHHHHHHHHHHHHHHSSSEEEEEEEEETT-EEEEEEEEEEECCCGGG------EEEEEEEEEEEEEEC
T ss_pred             CCCCcHHHHHHHHHHHHHHHHHHHHHhCCCeeEEEEEecCC-CeEEEEEEEecCCCccc------cccceeeeEEEEEee
Confidence            99999999999999999999999999999999999999996 79999999999887654      689999999999985


Q ss_pred             c-CCceeEEEEeeEEEEEeeeCCCCCceeeecceeeeecccCcC---------ccchhHHHhhHHHHhhhhhe
Q 026754          161 E-EEGIARYCLTSTVMLSLTTDHESSGTFSLSGSIRRQVICHLN---------CYGVMFFETSWRMEFSCRLF  223 (233)
Q Consensus       161 ~-~~~~a~YklTSTV~L~l~~~~~~~g~~~LsGsltrq~e~~~~---------NiG~mIEdmE~~mR~s~~~~  223 (233)
                      . ++++|||||||||||+|++++++.|.|+||||||||+|++++         |||+||||||++||++|++.
T Consensus       159 ~~~~~~~~YklTSTVmL~l~~~~~~~g~~~LsGsltRq~e~~~~v~~~~~Hi~NiG~mVEdmE~~mRn~L~~V  231 (277)
T 3lk4_B          159 KSSGRTAHYKLTSTVMLWLQTNKTGSGTMNLGGSLTRQMEKDETVSDSSPHIANIGRLVEDMENKIRSTLNEI  231 (277)
T ss_dssp             ----CEEEEEEEEEEEEEEEECCSSSSEEEEEEEEEEEEEEEEECSSSSCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             ccCCceeEEEEeEEEEEEEEcCCCCcceEeeceeeeeeccccccCCCCchHHHHHHHHHHHHHHHHHHHHHHH
Confidence            3 678899999999999999998889999999999999999986         99999999999999999874

>4akr_B F-actin-capping protein subunit beta; actin-binding protein; 2.20A {Dictyostelium discoideum}

Probab=100.00  E-value=9e-115  Score=783.20  Aligned_cols=218  Identities=47%  Similarity=0.840  Sum_probs=204.0

Q ss_pred             ChhhhhhhhcCCCccHHHHHHHHHccCcchhHHHhhcCCCceeeeeecccCceeeecccCCCCCCCCCCCCCCCCCCCCC
Q 026754            1 MEAAMGLMRRMPPKHSETALSALLSLLPDHSSDLLSQVDQPLQVLFDEESGKEFILCEYNRDADSYRSPWSNKYHPPLED   80 (233)
Q Consensus         1 ~daaLdLlRRLpP~~ie~nl~~l~~L~Pdl~edLLssVDqPLkv~~d~~~~k~yL~CdYNRDgDSYRSPwSNkY~P~l~d   80 (233)
                      +||||||||||||++||+||++||+|+|+||+||||+|||||||++|+++||+||+||||||||||||||||+|+||++|
T Consensus        24 ~daaLdLlRRLpP~~ie~nL~~Li~L~Pdl~edLLssVDqPLki~~d~~~~k~yL~CDYNRDGDSYRSPwSNkY~Ppl~d  103 (290)
T 4akr_B           24 LSCCLDLMRRLPPSQIEDNLAGLLDLVPDLTEDLLSSIDQPLKVAYDAVSKKDYLLCDYNRDADSYRSPWSNKYDPPLSG  103 (290)
T ss_dssp             HHHHHHHHHHSCGGGHHHHHHHHHHHCGGGHHHHHHHCCCCCEEEEETTTTEEEEECGGGEETTEEECTTTCCEESCCSS
T ss_pred             HHHHHHHHhhCCHHHHHHHHHHHHhhChHhHHHHHHhCCCcceEeEccccCCeEEeecccCCCccccCCCCCCcCCCCCC
Confidence            58999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCChHHHHHHHHHHHHHHHHHHhhhcCCeeeEEeeecCCCCeeEEEEEEecCCCCcCCCCCCCCCcceeeeEEEEeee
Q 026754           81 ALYPPAELRKLEIEANEVFAIYRDQYYEGGISSVYMWEDDNEGFVACFLIKKDGSKTAQGRRGHLEEGAWDAIHVIEVAP  160 (233)
Q Consensus        81 g~~PS~~LR~LEi~aN~~Fd~Yr~lYYeGGvSSVYlWdld~~gFagvvLiKK~~~~~~~~~~~~~~~G~WDSIHV~EV~~  160 (233)
                      |++||++||+||++||+|||+||+||||||||||||||+|+ ||||||||||+++++++   |+..+|+|||||||||++
T Consensus       104 g~~PS~~LRkLEi~aN~aFd~Yr~lYYeGGvSSVYlWdld~-gFagvvLiKK~~~~~~~---g~~~~G~WDSIHV~Ev~~  179 (290)
T 4akr_B          104 ACYPSSKLRDIEVQANEIFEIYLNLYFEGGVSSVYCWDLDD-NFAAVVLMKKTQDQSKK---GQPMRGTWDSIHVVEVKL  179 (290)
T ss_dssp             CCCCCHHHHHHHHHHHHHHHHHHHHHHSSSEEEEEEEEETT-EEEEEEEEEEEEC---------CEEEEEEEEEEEEEEE
T ss_pred             CCCChHHHHHHHHHHHHHHHHHHHHHhcCCeeEEEEEecCC-CceEEEEEEeccCcccc---ccCCCCceeeeEEEEEee
Confidence            99999999999999999999999999999999999999996 79999999999887653   234789999999999984


Q ss_pred             cCCce-eEEEEeeEEEEEeeeCCCCCceeeecceeeeecccCcC---------ccchhHHHhhHHHHhhhhhe
Q 026754          161 EEEGI-ARYCLTSTVMLSLTTDHESSGTFSLSGSIRRQVICHLN---------CYGVMFFETSWRMEFSCRLF  223 (233)
Q Consensus       161 ~~~~~-a~YklTSTV~L~l~~~~~~~g~~~LsGsltrq~e~~~~---------NiG~mIEdmE~~mR~s~~~~  223 (233)
                       ++++ |||||||||||+|++++++.|.|+||||||||+|++++         |||+||||||++||++|++.
T Consensus       180 -~~~~~a~YklTSTVmL~L~t~~~~~g~~~LsGslTRq~e~~~~v~d~~~HI~NiG~mVEdmE~kmRn~L~eV  251 (290)
T 4akr_B          180 -GKKDKAVYKLTSTVMLSIETDNDNTGKVNLAGSLTRQDEKEYTFNEVDTHCVNIGKMVEDMESKLRQTLETI  251 (290)
T ss_dssp             -ETTTEEEEEEEEEEEEEEEEEETTTEEEEEEEEEEEEEEEEEECCSSSCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             -cCCCceEEEEeEEEEEEEecCCCCCceEeeeeeeeeecccccccCCCchHHHHHHHHHHHHHHHHHHHHHHH
Confidence             4554 99999999999999988899999999999999999986         99999999999999999864

>3aa0_B F-actin-capping protein subunit beta isoforms 1 A; actin capping protein, barbed END regulation, carmil family conformational change; 1.70A {Gallus gallus} PDB: 3aa1_B* 3aa6_B 3aa7_B* 2kxp_B 3lk2_B

Probab=100.00  E-value=4.4e-114  Score=764.65  Aligned_cols=215  Identities=49%  Similarity=0.858  Sum_probs=206.9

Q ss_pred             ChhhhhhhhcCCCccHHHHHHHHHccCcchhHHHhhcCCCceeeeeecccCceeeecccCCCCCCCCCCCCCCCCCCCCC
Q 026754            1 MEAAMGLMRRMPPKHSETALSALLSLLPDHSSDLLSQVDQPLQVLFDEESGKEFILCEYNRDADSYRSPWSNKYHPPLED   80 (233)
Q Consensus         1 ~daaLdLlRRLpP~~ie~nl~~l~~L~Pdl~edLLssVDqPLkv~~d~~~~k~yL~CdYNRDgDSYRSPwSNkY~P~l~d   80 (233)
                      +||||||||||||++||+||++||+|+|+||+||||+|||||||++|+++||+||+||||||||||||||||+|+||++|
T Consensus         6 ~d~aLdL~RRLpP~~ie~nl~~l~~L~Pdl~edLLssVDqPLki~~d~~~~k~yL~CdYNRDgDSYRSPwSN~Y~P~~~d   85 (244)
T 3aa0_B            6 LDCALDLMRRLPPQQIEKNLSDLIDLVPSLCEDLLSSVDQPLKIARDKVVGKDYLLCDYNRDGDSYRSPWSNKYDPPLED   85 (244)
T ss_dssp             HHHHHHHHTTSCGGGHHHHHHHHHHHCGGGHHHHHHHSCCCCEEEEETTTTEEEEECGGGEETTEEECTTTCCEESCCSS
T ss_pred             HHHHHHHHhcCCHHHHHHHHHHHHHhChHHHHHHHhccCCcceEeeccccCCeeeeecccCCCccccCCCCCCcCCCCCC
Confidence            58999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCChHHHHHHHHHHHHHHHHHHhhhcCCeeeEEeeecCCCCeeEEEEEEecCCCCcCCCCCCCCCcceeeeEEEEeee
Q 026754           81 ALYPPAELRKLEIEANEVFAIYRDQYYEGGISSVYMWEDDNEGFVACFLIKKDGSKTAQGRRGHLEEGAWDAIHVIEVAP  160 (233)
Q Consensus        81 g~~PS~~LR~LEi~aN~~Fd~Yr~lYYeGGvSSVYlWdld~~gFagvvLiKK~~~~~~~~~~~~~~~G~WDSIHV~EV~~  160 (233)
                      |++||++||+||++||++||+||+||||||||||||||+|+ ||||||||||+++++++      .+|+|||||||||++
T Consensus        86 g~~PS~~LR~LEi~aN~~Fd~Yr~lYyeGGvSSVYlWdld~-gFag~vLiKK~~~~~~~------~~G~WdSiHV~Ev~~  158 (244)
T 3aa0_B           86 GAMPSARLRKLEVEANNAFDQYRDLYFEGGVSSVYLWDLDH-GFAGVILIKKAGDGSKK------IKGCWDSIHVVEVQE  158 (244)
T ss_dssp             CCCCCHHHHHHHHHHHHHHHHHHHHHHSSSEEEEEEEEETT-EEEEEEEEEEECCTTSS------EEEEEEEEEEEEEEE
T ss_pred             CCCChHHHHHHHHHHHHHHHHHHHHHhCCCcceEEEEecCC-CceEEEEEEeccCcccc------cccceeeeeEEEEee
Confidence            99999999999999999999999999999999999999995 79999999999887654      689999999999986


Q ss_pred             c-CCceeEEEEeeEEEEEeeeCCCCCceeeecceeeeecccCcC---------ccchhHHHhhHHHHhhhhh
Q 026754          161 E-EEGIARYCLTSTVMLSLTTDHESSGTFSLSGSIRRQVICHLN---------CYGVMFFETSWRMEFSCRL  222 (233)
Q Consensus       161 ~-~~~~a~YklTSTV~L~l~~~~~~~g~~~LsGsltrq~e~~~~---------NiG~mIEdmE~~mR~s~~~  222 (233)
                      . ++++|||||||||||+|++++++.|.|+|||+||||+|++++         |||+|||+||++||++|++
T Consensus       159 ~~s~~~a~YklTSTvml~l~~~~~~~g~~~LsGsltRq~E~~~~v~~~~~Hi~NiG~mIEdmE~~~R~~L~~  230 (244)
T 3aa0_B          159 KSSGRTAHYKLTSTVMLWLQTNKTGSGTMNLGGSLTRQMEKDETVSDSSPHIANIGRLVEDMENKIRSTLNE  230 (244)
T ss_dssp             CTTSSEEEEEEEEEEEEEEEEEETTTEEEEEEEEEEEEEEEEEECSSSSCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             ccCCCceeEEEeeEEEEEeccCCCCcccEecceeeeehhhcccccCCChhHHHHHHHHHHHHHHHHHHHHHH
Confidence            4 467899999999999999998899999999999999999986         9999999999999999987

>3aa0_A F-actin-capping protein subunit alpha-1; actin capping protein, barbed END regulation, carmil family conformational change; 1.70A {Gallus gallus} PDB: 2kz7_A 1izn_A 3aa1_A* 3aa6_A 3aa7_A* 3aaa_A 3aae_A 3lk2_A 3lk3_A 3lk4_A 2kxp_A

Probab=100.00  E-value=7.2e-52  Score=371.40  Aligned_cols=204  Identities=13%  Similarity=0.217  Sum_probs=180.7

Q ss_pred             ChhhhhhhhcCCCccHHHHHHHHHccCcc---hhHHHhhcC-----CC--ceeeeeecccCceeeecccCCCC-CCCCCC
Q 026754            1 MEAAMGLMRRMPPKHSETALSALLSLLPD---HSSDLLSQV-----DQ--PLQVLFDEESGKEFILCEYNRDA-DSYRSP   69 (233)
Q Consensus         1 ~daaLdLlRRLpP~~ie~nl~~l~~L~Pd---l~edLLssV-----Dq--PLkv~~d~~~~k~yL~CdYNRDg-DSYRSP   69 (233)
                      +++|++||||+||.++++++++|+.|+|+   |.++|++++     ||  ||+|   +.++++||+|+||||| ++|+.|
T Consensus        14 ~~ia~~ll~~aPPge~~~v~~Dl~~L~~dd~ll~~~l~~a~~~yn~dq~~pl~v---~~~~~~~li~~yn~~~~~~Y~dp   90 (286)
T 3aa0_A           14 VRIAAKFITHAPPGEFNEVFNDVRLLLNNDNLLREGAAHAFAQYNMDQFTPVKI---EGYDDQVLITEHGDLGNGRFLDP   90 (286)
T ss_dssp             HHHHHHHHHTCCTTCHHHHHHHHHHHHCCHHHHHHHTHHHHHHHHHHTTCEECC---TTSSSCEECCGGGEEETTEEEET
T ss_pred             HHHHHHHHHhCCcHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHhcceeEEe---cCCCCcEEEEeccccCCCceeCc
Confidence            37899999999999999999999999998   889999999     99  9999   6788999999999998 899999


Q ss_pred             CCCCCC---CC---CCC--CCCCChHHHHHHHHHHHHHHHHHHhhhcCCeeeEEeeecCC-CCeeEEEEEEecCCCCcCC
Q 026754           70 WSNKYH---PP---LED--ALYPPAELRKLEIEANEVFAIYRDQYYEGGISSVYMWEDDN-EGFVACFLIKKDGSKTAQG  140 (233)
Q Consensus        70 wSNkY~---P~---l~d--g~~PS~~LR~LEi~aN~~Fd~Yr~lYYeGGvSSVYlWdld~-~gFagvvLiKK~~~~~~~~  140 (233)
                      ||++|+   |.   ..|  +..||+.||++|+++|++|++|+++||+||+||||+||+|+ ++||+||++||. ++.+  
T Consensus        91 ~s~~~f~~Dh~~~~~~d~~~~~ps~~l~~~r~~~~~~l~~Y~~~~Y~~g~~sVY~~d~e~~~~~a~~I~~~k~-~~~n--  167 (286)
T 3aa0_A           91 RNKISFKFDHLRKEASDPQPEDTESALKQWRDACDSALRAYVKDHYPNGFCTVYGKSIDGQQTIIACIESHQF-QPKN--  167 (286)
T ss_dssp             TTTEEEEEETTTTEEEEEEECCCCCTTHHHHHHHHHHHHHHHHHHSSSCEEEEEEEEETTEEEEEEEEEEEEE-EGGG--
T ss_pred             ccCceEEeecccceeccCCCCCCchhhHHHHHHHHHHHHHHHHHHcCCCceEEEecccCCCceEEEEEEEecc-CCcc--
Confidence            999987   65   233  45899999999999999999999999999999999999885 269999999995 3322  


Q ss_pred             CCCCCCCcceeeeEEEEeeecCCceeEEEEeeEEEEEeeeCCCCCceeeecceeeeecccCcC---------ccchhHHH
Q 026754          141 RRGHLEEGAWDAIHVIEVAPEEEGIARYCLTSTVMLSLTTDHESSGTFSLSGSIRRQVICHLN---------CYGVMFFE  211 (233)
Q Consensus       141 ~~~~~~~G~WDSIHV~EV~~~~~~~a~YklTSTV~L~l~~~~~~~g~~~LsGsltrq~e~~~~---------NiG~mIEd  211 (233)
                          .-.|+|+|||||||.+ .    .|+||+||++.+..-.+  |.+.|.+  |||++++.+         |||+|||+
T Consensus       168 ----fw~G~W~Si~~~~v~~-~----~~~l~G~i~v~vHY~Ed--GNV~L~~--~k~~~~~~~~~~~~~~a~~i~~~Ie~  234 (286)
T 3aa0_A          168 ----FWNGRWRSEWKFTITP-P----TAQVAAVLKIQVHYYED--GNVQLVS--HKDIQDSVQVSSDVQTAKEFIKIIEN  234 (286)
T ss_dssp             ----TEEEEEEEEEEEEEET-T----EEEEEEEEEEEEEECTT--EEEEEEE--EEEEEEEEECCSHHHHHHHHHHHHHH
T ss_pred             ----ccCceeeeEEEEEecc-c----cceEEEEEEEEEEEecC--ceEEEee--ccccccccccCChHHHHHHHHHHHHH
Confidence                3679999999999983 1    59999999999877554  8999999  899987663         99999999


Q ss_pred             hhHHHHhhhhhe
Q 026754          212 TSWRMEFSCRLF  223 (233)
Q Consensus       212 mE~~mR~s~~~~  223 (233)
                      ||+++|++|.+.
T Consensus       235 ~E~~~~~~L~e~  246 (286)
T 3aa0_A          235 AENEYQTAISEN  246 (286)
T ss_dssp             HHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHH
Confidence            999999999873

>4akr_A F-actin-capping protein subunit alpha; actin-binding protein; 2.20A {Dictyostelium discoideum}

Probab=98.34  E-value=5.5e-06  Score=74.61  Aligned_cols=196  Identities=15%  Similarity=0.196  Sum_probs=125.5

Q ss_pred             hhhhhhcCCCccHHHHHHHHHccCcc---hhHHHhhcC-----CC--ceeeeeecccCceeeecccCCCCCCCCCCCCCC
Q 026754            4 AMGLMRRMPPKHSETALSALLSLLPD---HSSDLLSQV-----DQ--PLQVLFDEESGKEFILCEYNRDADSYRSPWSNK   73 (233)
Q Consensus         4 aLdLlRRLpP~~ie~nl~~l~~L~Pd---l~edLLssV-----Dq--PLkv~~d~~~~k~yL~CdYNRDgDSYRSPwSNk   73 (233)
                      |-+++..=||-++.+-+++|..|.++   +-+.+...+     +|  |+++-     |.+.|.|.||+-|+       |+
T Consensus        11 ~~~fl~~aPPGE~~eV~~Dlr~l~~~d~~~~~~~~~a~~~Yn~~q~~~v~~~-----g~~viis~~n~l~~-------~r   78 (281)
T 4akr_A           11 ATNFLLNAPPCEFMEVVSDVRALLPSESLLNASAGSTFREYNTSQMVSVQTS-----KGSALITKEGEISN-------NE   78 (281)
T ss_dssp             HHHHHHTCCTTCHHHHHHHHHTTCSCTTTTTTTHHHHHHHHHHHHTCEEEET-----TEEEECCSTTEEET-------TE
T ss_pred             HHHHHHcCCCchHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHccEEEEeC-----CCcEEEeeccccCC-------Ce
Confidence            66788899999999999999999975   333333222     22  44442     33499999998665       44


Q ss_pred             CCCCCC--------------C--CCC--CChHHHHHHHHHHHHHHHHHHhhhcCCeeeEEeeecCC-CCeeEEEEEEecC
Q 026754           74 YHPPLE--------------D--ALY--PPAELRKLEIEANEVFAIYRDQYYEGGISSVYMWEDDN-EGFVACFLIKKDG  134 (233)
Q Consensus        74 Y~P~l~--------------d--g~~--PS~~LR~LEi~aN~~Fd~Yr~lYYeGGvSSVYlWdld~-~gFagvvLiKK~~  134 (233)
                      |+-|-.              |  ..-  |.+.+..+=.....++..|-+-+|-+|+++||-=..++ ..++.|+.=.|- 
T Consensus        79 y~Dp~~k~sF~~DHl~~~a~d~~~~~~~~~~~~e~~R~al~~~l~~Yv~~hYp~g~~~Vy~~~~~~~~~l~i~I~~~k~-  157 (281)
T 4akr_A           79 YLDPKNKQVITYDHIKQEVTGERSASGEIEQDIEQYRAAFDEEATKYCNEYYPNGVSAVYGTKVSEGIKITVCISTCIY-  157 (281)
T ss_dssp             EEEGGGTEEEEEETTTTEEEEEEECSSCSCGGGHHHHHHHHHHHHHHHHHHCTTCEEEEEEEEETTEEEEEEEEEEEEE-
T ss_pred             EEccCCCeEEEEeccCCEEcCcccccccCccchHHHHHHHHHHHHHHHHhhCCCCcEEEecccCCCCcEEEEEEEeCcc-
Confidence            543221              0  111  45567777788999999999999999999999655442 126555554442 


Q ss_pred             CCCcCCCCCCCCCcceeeeEEEEeeecCCceeEEEEeeEEEEEeeeCCCCCceeeecceeeeecc-------cCcCccch
Q 026754          135 SKTAQGRRGHLEEGAWDAIHVIEVAPEEEGIARYCLTSTVMLSLTTDHESSGTFSLSGSIRRQVI-------CHLNCYGV  207 (233)
Q Consensus       135 ~~~~~~~~~~~~~G~WDSIHV~EV~~~~~~~a~YklTSTV~L~l~~~~~~~g~~~LsGsltrq~e-------~~~~NiG~  207 (233)
                      ++.+      .-.|.|-|.=.|.|.+.++   +-.++.+|-+.+--=.  .|.+.|..+=.-+..       +.+++|-+
T Consensus       158 np~N------FwnGrWrS~w~~~~~~~~~---~l~~~G~I~V~vHYyE--DGNVqL~s~k~~~~s~~~~~~~~~a~~iv~  226 (281)
T 4akr_A          158 KPNA------FYSGRWRSVWTCTFKPGSG---NVTSNGKVQVNVHYFE--DGNVQLNTVTQKQTTSPSADAQSTAVNAFK  226 (281)
T ss_dssp             EGGG------TEEEEEEEEEEEEECTTSS---EEEEEEEEEEEEEECS--SEEEEEEEEEEEEEEEECCSHHHHHHHHHH
T ss_pred             Cccc------ccCCceEEEEEEEecCCCC---eEEECCEEEEEEEEee--cceEEEEeccccccccccCCchhhHHHHHH
Confidence            3333      2579999999999874332   2233377666553221  244444333222111       12338999


Q ss_pred             hHHHhhHHHHhhhhhe
Q 026754          208 MFFETSWRMEFSCRLF  223 (233)
Q Consensus       208 mIEdmE~~mR~s~~~~  223 (233)
                      +|++.|++...+|.+.
T Consensus       227 ~I~~~E~~~q~~l~~~  242 (281)
T 4akr_A          227 AIGKAELNLHTALDNN  242 (281)
T ss_dssp             HHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHH
Confidence            9999999999888653

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	233
d1iznb_	270	e.43.1.2 (B:) Capz beta-1 subunit {Chicken (Gallus	1e-101

>d1iznb_ e.43.1.2 (B:) Capz beta-1 subunit {Chicken (Gallus gallus) [TaxId: 9031]} Length = 270

class: Multi-domain proteins (alpha and beta)
fold: Subunits of heterodimeric actin filament capping protein Capz
superfamily: Subunits of heterodimeric actin filament capping protein Capz
family: Capz beta-1 subunit
domain: Capz beta-1 subunit
species: Chicken (Gallus gallus) [TaxId: 9031]

 Score =  292 bits (748), Expect = e-101
 Identities = 106/199 (53%), Positives = 136/199 (68%), Gaps = 8/199 (4%)

Query: 1   MEAAMGLMRRMPPKHSETALSALLSLLPDHSSDLLSQVDQPLQVLFDEESGKEFILCEYN 60
           ++ A+ LMRR+PP+  E  LS L+ L+P    DLLS VDQPL++  D+  GK+++LC+YN
Sbjct: 5   LDCALDLMRRLPPQQIEKNLSDLIDLVPSLCEDLLSSVDQPLKIARDKVVGKDYLLCDYN 64

Query: 61  RDADSYRSPWSNKYHPPLEDALYPPAELRKLEIEANEVFAIYRDQYYEGGISSVYMWEDD 120
           RD DSYRSPWSNKY PPLED   P A LRKLE+EAN  F  YRD Y+EGG+SSVY+W+ D
Sbjct: 65  RDGDSYRSPWSNKYDPPLEDGAMPSARLRKLEVEANNAFDQYRDLYFEGGVSSVYLWDLD 124

Query: 121 NEGFVACFLIKKDGSKTAQGRRGHLEEGAWDAIHVIEVAPEEEG-IARYCLTSTVMLSLT 179
           + GF    LIKK G  + +       +G WD+IHV+EV  +  G  A Y LTSTVML L 
Sbjct: 125 H-GFAGVILIKKAGDGSKK------IKGCWDSIHVVEVQEKSSGRTAHYKLTSTVMLWLQ 177

Query: 180 TDHESSGTFSLSGSIRRQV 198
           T+   SGT +L GS+ RQ+
Sbjct: 178 TNKTGSGTMNLGGSLTRQM 196

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	233
d1iznb_	270	Capz beta-1 subunit {Chicken (Gallus gallus) [TaxI	100.0
d1izna_	275	Capz alpha-1 subunit {Chicken (Gallus gallus) [Tax	97.69

>d1iznb_ e.43.1.2 (B:) Capz beta-1 subunit {Chicken (Gallus gallus) [TaxId: 9031]}

class: Multi-domain proteins (alpha and beta)
fold: Subunits of heterodimeric actin filament capping protein Capz
superfamily: Subunits of heterodimeric actin filament capping protein Capz
family: Capz beta-1 subunit
domain: Capz beta-1 subunit
species: Chicken (Gallus gallus) [TaxId: 9031]

Probab=100.00  E-value=9.1e-113  Score=762.62  Aligned_cols=216  Identities=49%  Similarity=0.855  Sum_probs=208.3

Q ss_pred             ChhhhhhhhcCCCccHHHHHHHHHccCcchhHHHhhcCCCceeeeeecccCceeeecccCCCCCCCCCCCCCCCCCCCCC
Q 026754            1 MEAAMGLMRRMPPKHSETALSALLSLLPDHSSDLLSQVDQPLQVLFDEESGKEFILCEYNRDADSYRSPWSNKYHPPLED   80 (233)
Q Consensus         1 ~daaLdLlRRLpP~~ie~nl~~l~~L~Pdl~edLLssVDqPLkv~~d~~~~k~yL~CdYNRDgDSYRSPwSNkY~P~l~d   80 (233)
                      +||||||||||||++||+||++||+|+|+|++||||+|||||||++|+++||+||+||||||||||||||||+|+||++|
T Consensus         5 ~daaLdLlRRlpP~~ie~~l~~l~~L~pdl~edLLssVD~PLki~~d~~~~k~yL~CdyNRDgDSYRSPwSNkY~P~~ed   84 (270)
T d1iznb_           5 LDCALDLMRRLPPQQIEKNLSDLIDLVPSLCEDLLSSVDQPLKIARDKVVGKDYLLCDYNRDGDSYRSPWSNKYDPPLED   84 (270)
T ss_dssp             HHHHHHHHTTSCGGGHHHHHHHHHHHCGGGHHHHHHHSCCCCEEEEETTTTEEEEECGGGEETTEEECTTTCCEESCCSS
T ss_pred             HHHHHHHHhcCChHHHHHHHHHHHhhCHHHHHHHHHhCCCcceEeEchhhCCeeEeecccCCCccccCCCCCCcCCCccC
Confidence            58999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCChHHHHHHHHHHHHHHHHHHhhhcCCeeeEEeeecCCCCeeEEEEEEecCCCCcCCCCCCCCCcceeeeEEEEeee
Q 026754           81 ALYPPAELRKLEIEANEVFAIYRDQYYEGGISSVYMWEDDNEGFVACFLIKKDGSKTAQGRRGHLEEGAWDAIHVIEVAP  160 (233)
Q Consensus        81 g~~PS~~LR~LEi~aN~~Fd~Yr~lYYeGGvSSVYlWdld~~gFagvvLiKK~~~~~~~~~~~~~~~G~WDSIHV~EV~~  160 (233)
                      |++||++||+||++||+|||+||+||||||||||||||+|+ ||||||||||+++++++      .+|+|||||||||++
T Consensus        85 g~~PS~~LR~LEi~aN~~Fd~Yr~lYYegGvSSVYlWdld~-gFag~vliKK~~~~~~~------~~G~WDsIHV~ev~~  157 (270)
T d1iznb_          85 GAMPSARLRKLEVEANNAFDQYRDLYFEGGVSSVYLWDLDH-GFAGVILIKKAGDGSKK------IKGCWDSIHVVEVQE  157 (270)
T ss_dssp             CCCCCHHHHHHHHHHHHHHHHHHHHHHSSSEEEEEEEECSS-EEEEEEEEEEECCTTSS------EEEEEEEEEEEEEEE
T ss_pred             CCCChHHHHHHHHHHHHHHHHHHHHHhcCCcceEEEEecCC-CceEEEEEEecCCCCCC------ceeeeeeeEEEEEee
Confidence            99999999999999999999999999999999999999985 79999999999988765      789999999999986


Q ss_pred             c-CCceeEEEEeeEEEEEeeeCCCCCceeeecceeeeecccCcC---------ccchhHHHhhHHHHhhhhhe
Q 026754          161 E-EEGIARYCLTSTVMLSLTTDHESSGTFSLSGSIRRQVICHLN---------CYGVMFFETSWRMEFSCRLF  223 (233)
Q Consensus       161 ~-~~~~a~YklTSTV~L~l~~~~~~~g~~~LsGsltrq~e~~~~---------NiG~mIEdmE~~mR~s~~~~  223 (233)
                      . ++++|||||||||||+|+++++++|.|+|||+||||+|++++         |||+|||+||++||++|++.
T Consensus       158 ~~s~~~~~YkltSTv~L~l~~~~~~~g~~~LsGsltrq~e~~~~v~~~~~Hi~NiG~mIEdmE~~mR~~L~~V  230 (270)
T d1iznb_         158 KSSGRTAHYKLTSTVMLWLQTNKTGSGTMNLGGSLTRQMEKDETVSDSSPHIANIGRLVEDMENKIRSTLNEI  230 (270)
T ss_dssp             CTTTSEEEEEEEEEEEEEEEEEEGGGEEEEEEEEEEEEEEEEEECCSSSCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             cccCCeEEEEEeeEEEEEEecCCCccceEeecceeeeeecccccCCCCccHHHHHHHHHHHHHHHHHHHHHHH
Confidence            4 567899999999999999999999999999999999999987         99999999999999999874

>d1izna_ e.43.1.1 (A:) Capz alpha-1 subunit {Chicken (Gallus gallus) [TaxId: 9031]}

class: Multi-domain proteins (alpha and beta)
fold: Subunits of heterodimeric actin filament capping protein Capz
superfamily: Subunits of heterodimeric actin filament capping protein Capz
family: Capz alpha-1 subunit
domain: Capz alpha-1 subunit
species: Chicken (Gallus gallus) [TaxId: 9031]

Probab=97.69  E-value=0.0002  Score=62.20  Aligned_cols=205  Identities=13%  Similarity=0.169  Sum_probs=119.9

Q ss_pred             hhhhhhhcCCCccHHHHHHHHHccCcc---hhHHHhhc-----CCCceeeeeecccCceeeecccCCCCCC-CCCCCCC-
Q 026754            3 AAMGLMRRMPPKHSETALSALLSLLPD---HSSDLLSQ-----VDQPLQVLFDEESGKEFILCEYNRDADS-YRSPWSN-   72 (233)
Q Consensus         3 aaLdLlRRLpP~~ie~nl~~l~~L~Pd---l~edLLss-----VDqPLkv~~d~~~~k~yL~CdYNRDgDS-YRSPwSN-   72 (233)
                      -|-+++..=||-++..-+++|..|+.+   +-+-+...     ++|=..|.-+ ....+.|.|.||+-|++ |==|=+. 
T Consensus        10 i~~~fi~~aPPGE~~~V~~Dl~~l~~d~~~~~~~~~~a~~~yN~~q~~~v~l~-g~~~~viis~~n~l~~~ry~Dp~~k~   88 (275)
T d1izna_          10 IAAKFITHAPPGEFNEVFNDVRLLLNNDNLLREGAAHAFAQYNMDQFTPVKIE-GYDDQVLITEHGDLGNGRFLDPRNKI   88 (275)
T ss_dssp             HHHHHHHTCCTTCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHTTEEECCT-TSSCCEEECSTTBCSSSEEECTTTCE
T ss_pred             HHHHHHHcCCChhHHHHHHHHHHHhCCchHHHhhHHHHHHHHHHHheEEEEcC-CCCccEEEEeccccCCCEEEccCcce
Confidence            466788889999999999999998743   11222222     2332222222 12368999999999974 3222221 


Q ss_pred             --CCCCCC---CC--CCCCChHHHHHHHHHHHHHHHHHHhhhcCCeeeEEeeecCCCCeeEEEEE-EecCCCCcCCCCCC
Q 026754           73 --KYHPPL---ED--ALYPPAELRKLEIEANEVFAIYRDQYYEGGISSVYMWEDDNEGFVACFLI-KKDGSKTAQGRRGH  144 (233)
Q Consensus        73 --kY~P~l---~d--g~~PS~~LR~LEi~aN~~Fd~Yr~lYYeGGvSSVYlWdld~~gFagvvLi-KK~~~~~~~~~~~~  144 (233)
                        +|+.--   .|  ..-|...+..+-....+.+..|-+.+|-+|+++||.=+.|+ .+.-++.| =+.-++.+      
T Consensus        89 sF~~DHl~~~~sd~e~~~~~~~~e~~r~al~~~L~~Yv~~hYp~g~~~vy~~~~~~-~~~l~i~I~~~~~~p~N------  161 (275)
T d1izna_          89 SFKFDHLRKEASDPQPEDTESALKQWRDACDSALRAYVKDHYPNGFCTVYGKSIDG-QQTIIACIESHQFQPKN------  161 (275)
T ss_dssp             EEECCSSSSCCCCCEECCCCCSSHHHHHHHHHHHHHHHHHHCTTEEEEEEEEEETT-EEEEEEEEEEEEEEGGG------
T ss_pred             EEEEEcccCeEccCccCCCcchhHHHHHHHHHHHHHHHHHhCCCCceEEEccCCCC-CceEEEEEEeCcCCccc------
Confidence              222200   11  12233445666667778889999999999999999876664 33333322 33333333      


Q ss_pred             CCCcceeeeEEEEeeecCCceeEEEEeeEEEEEeeeCCCCCceeeec--------ceeeeecccCcCccchhHHHhhHHH
Q 026754          145 LEEGAWDAIHVIEVAPEEEGIARYCLTSTVMLSLTTDHESSGTFSLS--------GSIRRQVICHLNCYGVMFFETSWRM  216 (233)
Q Consensus       145 ~~~G~WDSIHV~EV~~~~~~~a~YklTSTV~L~l~~~~~~~g~~~Ls--------Gsltrq~e~~~~NiG~mIEdmE~~m  216 (233)
                      .-.|.|-|+=.|.|.+.++     .|+-+|-+.+--=.  .|.+.|.        -+.+... ..+.+|=+.|++.|++.
T Consensus       162 FwnG~WrS~w~~~~~~~~~-----~l~G~i~v~vHYyE--dGNVqL~s~k~~~~s~~~~~~~-~~A~~iv~~I~~~E~~~  233 (275)
T d1izna_         162 FWNGRWRSEWKFTITPPTA-----QVAAVLKIQVHYYE--DGNVQLVSHKDIQDSVQVSSDV-QTAKEFIKIIENAENEY  233 (275)
T ss_dssp             TEEEEEEEEEEEECCSSEE-----EEEEEEEEEEEECS--SEEEEEEEEEEEEEEEECCCSH-HHHHHHHHHHHHHHHHH
T ss_pred             ccCceeEEEEEEEccCCCc-----EEEEEEEEEEEEEe--cCeEEEEEccccccccccCChH-HHHHHHHHHHHHHHHHH
Confidence            3679999999998863211     35555555442211  1444442        1111111 11226778899999998


Q ss_pred             Hhhhhhe
Q 026754          217 EFSCRLF  223 (233)
Q Consensus       217 R~s~~~~  223 (233)
                      -.+|-+.
T Consensus       234 q~~l~e~  240 (275)
T d1izna_         234 QTAISEN  240 (275)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHHH
Confidence            8877654