Citrus Sinensis ID: 026844

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230--
MFSTPKAFVKIYFNCPHASSSPESEVLTDIFTRLLLDYLNEYAYYAQVAGLDYGINHTESGFEVTVVGYNHKLRILLETIFQKIAQFKVKPDRFSVIKEMVTKEYHNNKFLQPFQLAMYYCSLILQDQTWPWMEELEVLPHLEAEDLAKFVPMMLSRTFLECYIAGSIIQYIEDVFFKGSNPICQPLFPSQHLTNRVVKLEKGKNYVYSNQGLNPSDENSCLVHYIQVQEFF
cccccEEEEEEEEEcccccccHHHHHHHHHHHHHHHHHHHHHHcHHHHHccEEEEEEccccEEEEEEEcccHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHccccccHHHHHHHcccccHHHHHHHHHHHHcccEEEEEEEccccHHHHHHHHHHcccccccccccccccccEEEcccccEEEEEEcccccccccEEEEEEEEccccc
ccccccEEEEEEEEcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccEEEEEccccEEEEEEEccccHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHcccccHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHccccccccccccEEEEEcccccEEEEEEEccccccccEEEEEEEEcccc
MFSTPKAFVKIYfncphassspesevLTDIFTRLLLDYLNEYAYYAQVAGLdyginhtesGFEVTVVGYNHKLRILLETIFQKIAQFKVKPDRFSVIKEMVTKeyhnnkflqpFQLAMYYCSLilqdqtwpwmeelevlphleaedlaKFVPMMLSRTFLECYIAGSIIQYIEDVffkgsnpicqplfpsqhltnRVVKLekgknyvysnqglnpsdenscLVHYIQVQEFF
MFSTPKAFVKIYFNcphassspeseVLTDIFTRLLLDYLNEYAYYAQVAGLDYGINHTESGFEVTVVGYNHKLRILLETIFQKIAQFKVKPDRFSVIKEMVTKEYHNNKFLQPFQLAMYYCSLILQDQTWPWMEELEVLPHLEAEDLAKFVPMMLSRTFLECYIAGSIIQYIEDVFFKGSNPICQPLFPSQHLTNRVVKLEKGKNYVYSNqglnpsdensCLVHYIQVQEFF
MFSTPKAFVKIYFNCPHASSSPESEVLTDIFTRLLLDYLNEYAYYAQVAGLDYGINHTESGFEVTVVGYNHKLRILLETIFQKIAQFKVKPDRFSVIKEMVTKEYHNNKFLQPFQLAMYYCSLILQDQTWPWMEELEVLPHLEAEDLAKFVPMMLSRTFLECYIAGSIIQYIEDVFFKGSNPICQPLFPSQHLTNRVVKLEKGKNYVYSNQGLNPSDENSCLVHYIQVQEFF
******AFVKIYFNCPH*******EVLTDIFTRLLLDYLNEYAYYAQVAGLDYGINHTESGFEVTVVGYNHKLRILLETIFQKIAQFKVKPDRFSVIKEMVTKEYHNNKFLQPFQLAMYYCSLILQDQTWPWMEELEVLPHLEAEDLAKFVPMMLSRTFLECYIAGSIIQYIEDVFFKGSNPICQPLFPSQHLTNRVVKLEKGKNYVYSNQGLN***ENSCLVHYIQV****
MFSTPKAFVKIYFNCPHASSSPESEVLTDIFTRLLLDYLNEYAYYAQVAGLDYGINHTESGFEVTVVGYNHKLRILLETIFQKIAQFKVKPDRFSVIKEMVTKEYHNNKFLQPFQLAMYYCSLILQDQTWPWMEELEVLPHLEAEDLAKFVPMMLSRTFLECYIAGSIIQYIEDVFFKGSNPICQPLF*SQHLTNRVVKLEKGKNYVYSNQGLNPSDENSCLVHYIQVQEFF
MFSTPKAFVKIYFNCPHASSSPESEVLTDIFTRLLLDYLNEYAYYAQVAGLDYGINHTESGFEVTVVGYNHKLRILLETIFQKIAQFKVKPDRFSVIKEMVTKEYHNNKFLQPFQLAMYYCSLILQDQTWPWMEELEVLPHLEAEDLAKFVPMMLSRTFLECYIAGSIIQYIEDVFFKGSNPICQPLFPSQHLTNRVVKLEKGKNYVYSNQGLNPSDENSCLVHYIQVQEFF
MFSTPKAFVKIYFNCPHASSSPESEVLTDIFTRLLLDYLNEYAYYAQVAGLDYGINHTESGFEVTVVGYNHKLRILLETIFQKIAQFKVKPDRFSVIKEMVTKEYHNNKFLQPFQLAMYYCSLILQDQTWPWMEELEVLPHLEAEDLAKFVPMMLSRTFLECYIAGSIIQYIEDVFFKGSNPICQPLFPSQHLTNRVVKLEKGKNYVYSNQGLNPSDENSCLVHYIQVQEFF
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
oooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
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MFSTPKAFVKIYFNCPHASSSPESEVLTDIFTRLLLDYLNEYAYYAQVAGLDYGINHTESGFEVTVVGYNHKLRILLETIFQKIAQFKVKPDRFSVIKEMVTKEYHNNKFLQPFQLAMYYCSLILQDQTWPWMEELEVLPHLEAEDLAKFVPMMLSRTFLECYIAGSIIQYIEDVFFKGSNPICQPLFPSQHLTNRVVKLEKGKNYVYSNQGLNPSDENSCLVHYIQVQEFF
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query232 2.2.26 [Sep-21-2011]
O22941 970 Zinc-metallopeptidase, pe yes no 0.982 0.235 0.716 7e-98
P14735 1019 Insulin-degrading enzyme no no 0.905 0.206 0.348 9e-27
Q24K02 1019 Insulin-degrading enzyme yes no 0.905 0.206 0.348 1e-26
P35559 1019 Insulin-degrading enzyme yes no 0.905 0.206 0.348 1e-26
O14077 969 Putative zinc protease mu yes no 0.991 0.237 0.271 1e-25
Q9JHR7 1019 Insulin-degrading enzyme yes no 0.905 0.206 0.343 2e-25
Q06010 1027 A-factor-processing enzym yes no 0.965 0.218 0.285 4e-21
P22817 990 Insulin-degrading enzyme yes no 0.965 0.226 0.283 2e-20
O43847 1150 Nardilysin OS=Homo sapien no no 0.935 0.188 0.313 3e-17
Q5R4H6 1152 Nardilysin OS=Pongo abeli no no 0.935 0.188 0.313 4e-17
>sp|O22941|PXM16_ARATH Zinc-metallopeptidase, peroxisomal OS=Arabidopsis thaliana GN=PXM16 PE=2 SV=1 Back     alignment and function desciption
 Score =  356 bits (914), Expect = 7e-98,   Method: Compositional matrix adjust.
 Identities = 169/236 (71%), Positives = 196/236 (83%), Gaps = 8/236 (3%)

Query: 1   MFSTPKAFVKIYFNCPHASSSPESEVLTDIFTRLLLDYLNEYAYYAQVAGLDYGINHTES 60
           MFS PKA+VK+ FNCP A SSP++ VLTDIFTRLL+DYLNEYAYYAQVAGL YG++ +++
Sbjct: 526 MFSKPKAYVKMDFNCPLAVSSPDAAVLTDIFTRLLMDYLNEYAYYAQVAGLYYGVSLSDN 585

Query: 61  GFEVTVVGYNHKLRILLETIFQKIAQFKVKPDRFSVIKEMVTKEYHNNKFLQPFQLAMYY 120
           GFE+T++GYNHKLRILLET+  KIA F+VKPDRF+VIKE VTKEY N KF QP+  AMYY
Sbjct: 586 GFELTLLGYNHKLRILLETVVGKIANFEVKPDRFAVIKETVTKEYQNYKFRQPYHQAMYY 645

Query: 121 CSLILQDQTWPWMEELEVLPHLEAEDLAKFVPMMLSRTFLECYIAG--------SIIQYI 172
           CSLILQDQTWPW EEL+VL HLEAED+AKFVPM+LSRTF+ECYIAG        S++++I
Sbjct: 646 CSLILQDQTWPWTEELDVLSHLEAEDVAKFVPMLLSRTFIECYIAGNVENNEAESMVKHI 705

Query: 173 EDVFFKGSNPICQPLFPSQHLTNRVVKLEKGKNYVYSNQGLNPSDENSCLVHYIQV 228
           EDV F    PIC+PLFPSQHLTNRVVKL +G  Y Y   G NPSDENS LVHYIQV
Sbjct: 706 EDVLFNDPKPICRPLFPSQHLTNRVVKLGEGMKYFYHQDGSNPSDENSALVHYIQV 761
Peptidase that might be involved in pathogen or wound response. Not required for peroxisome biogenesis, indole-3-butyric acid (IBA) metabolism, fatty acid beta-oxidation or degradation of glyoxylate cycle enzymes during seedling development.
Arabidopsis thaliana (taxid: 3702)
EC: 3EC: .EC: 4EC: .EC: 2EC: 4EC: .EC: -
>sp|P14735|IDE_HUMAN Insulin-degrading enzyme OS=Homo sapiens GN=IDE PE=1 SV=4 Back     alignment and function description
>sp|Q24K02|IDE_BOVIN Insulin-degrading enzyme OS=Bos taurus GN=IDE PE=2 SV=1 Back     alignment and function description
>sp|P35559|IDE_RAT Insulin-degrading enzyme OS=Rattus norvegicus GN=Ide PE=1 SV=1 Back     alignment and function description
>sp|O14077|MU138_SCHPO Putative zinc protease mug138 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=mug138 PE=1 SV=1 Back     alignment and function description
>sp|Q9JHR7|IDE_MOUSE Insulin-degrading enzyme OS=Mus musculus GN=Ide PE=1 SV=1 Back     alignment and function description
>sp|Q06010|STE23_YEAST A-factor-processing enzyme OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=STE23 PE=1 SV=2 Back     alignment and function description
>sp|P22817|IDE_DROME Insulin-degrading enzyme OS=Drosophila melanogaster GN=Ide PE=1 SV=4 Back     alignment and function description
>sp|O43847|NRDC_HUMAN Nardilysin OS=Homo sapiens GN=NRD1 PE=1 SV=2 Back     alignment and function description
>sp|Q5R4H6|NRDC_PONAB Nardilysin OS=Pongo abelii GN=NRD1 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query232
224087014 949 predicted protein [Populus trichocarpa] 0.991 0.242 0.756 1e-103
255582581 967 Insulin-degrading enzyme, putative [Rici 0.991 0.237 0.756 1e-103
225441825 965 PREDICTED: zinc-metallopeptidase, peroxi 0.991 0.238 0.752 1e-103
255582579 909 Insulin-degrading enzyme, putative [Rici 0.991 0.253 0.722 4e-99
15227435 970 insulysin [Arabidopsis thaliana] gi|7509 0.982 0.235 0.716 4e-96
110741612 970 putative zinc protease [Arabidopsis thal 0.982 0.235 0.711 3e-95
225441823 965 PREDICTED: zinc-metallopeptidase, peroxi 0.987 0.237 0.713 3e-95
297827829 970 peptidase M16 family protein [Arabidopsi 0.982 0.235 0.711 4e-95
356572034 964 PREDICTED: zinc-metallopeptidase, peroxi 0.982 0.236 0.711 3e-93
356504785 964 PREDICTED: zinc-metallopeptidase, peroxi 0.982 0.236 0.707 6e-93
>gi|224087014|ref|XP_002308028.1| predicted protein [Populus trichocarpa] gi|222854004|gb|EEE91551.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
 Score =  380 bits (975), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 180/238 (75%), Positives = 208/238 (87%), Gaps = 8/238 (3%)

Query: 1   MFSTPKAFVKIYFNCPHASSSPESEVLTDIFTRLLLDYLNEYAYYAQVAGLDYGINHTES 60
           MFSTPKA+VKI FNCP ASSSPE+EVLTDIF RLL+D LN+YAYYAQVAGL YGI++T+S
Sbjct: 503 MFSTPKAYVKIDFNCPFASSSPETEVLTDIFARLLMDDLNDYAYYAQVAGLYYGISNTDS 562

Query: 61  GFEVTVVGYNHKLRILLETIFQKIAQFKVKPDRFSVIKEMVTKEYHNNKFLQPFQLAMYY 120
           GF+VTVVGYNHKLRILLET+ +KI+ FKVKPDRFSVIKEMVTKEY N KF QP+Q AMYY
Sbjct: 563 GFQVTVVGYNHKLRILLETVIEKISNFKVKPDRFSVIKEMVTKEYGNLKFQQPYQQAMYY 622

Query: 121 CSLILQDQTWPWMEELEVLPHLEAEDLAKFVPMMLSRTFLECYIAG--------SIIQYI 172
           CSL+LQDQTWPWME+LE+LPHL+AEDLAKF+P+MLSR FLECYIAG        S+I +I
Sbjct: 623 CSLLLQDQTWPWMEQLEILPHLQAEDLAKFIPLMLSRAFLECYIAGNIERSEAESMILHI 682

Query: 173 EDVFFKGSNPICQPLFPSQHLTNRVVKLEKGKNYVYSNQGLNPSDENSCLVHYIQVQE 230
           EDVF +G +PICQPLFPSQHLT+RV+KLE+G NY+Y  +GLNP DENS LVHYIQ+  
Sbjct: 683 EDVFNEGPDPICQPLFPSQHLTSRVIKLERGINYLYPIEGLNPDDENSALVHYIQIHR 740

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|255582581|ref|XP_002532073.1| Insulin-degrading enzyme, putative [Ricinus communis] gi|223528255|gb|EEF30307.1| Insulin-degrading enzyme, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|225441825|ref|XP_002283993.1| PREDICTED: zinc-metallopeptidase, peroxisomal [Vitis vinifera] gi|297739661|emb|CBI29843.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|255582579|ref|XP_002532072.1| Insulin-degrading enzyme, putative [Ricinus communis] gi|223528254|gb|EEF30306.1| Insulin-degrading enzyme, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|15227435|ref|NP_181710.1| insulysin [Arabidopsis thaliana] gi|75097648|sp|O22941.1|PXM16_ARATH RecName: Full=Zinc-metallopeptidase, peroxisomal; AltName: Full=Peroxisomal M16 protease gi|2335108|gb|AAC02769.1| putative zinc protease [Arabidopsis thaliana] gi|330254939|gb|AEC10033.1| insulysin [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|110741612|dbj|BAE98754.1| putative zinc protease [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|225441823|ref|XP_002283970.1| PREDICTED: zinc-metallopeptidase, peroxisomal [Vitis vinifera] gi|297739662|emb|CBI29844.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|297827829|ref|XP_002881797.1| peptidase M16 family protein [Arabidopsis lyrata subsp. lyrata] gi|297327636|gb|EFH58056.1| peptidase M16 family protein [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|356572034|ref|XP_003554175.1| PREDICTED: zinc-metallopeptidase, peroxisomal-like [Glycine max] Back     alignment and taxonomy information
>gi|356504785|ref|XP_003521175.1| PREDICTED: zinc-metallopeptidase, peroxisomal-like [Glycine max] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query232
TAIR|locus:2054346 970 AT2G41790 [Arabidopsis thalian 0.982 0.235 0.716 3.6e-89
TAIR|locus:2103523 891 AT3G57470 [Arabidopsis thalian 0.987 0.257 0.649 1.8e-80
ZFIN|ZDB-GENE-070410-85 998 ide "insulin-degrading enzyme" 0.952 0.221 0.340 8.6e-27
ASPGD|ASPL0000015933 1100 AN8044 [Emericella nidulans (t 0.956 0.201 0.308 1e-26
TAIR|locus:2103513356 AT3G57460 [Arabidopsis thalian 0.469 0.306 0.522 2.5e-26
UNIPROTKB|F1SC98 990 IDE "Uncharacterized protein" 0.905 0.212 0.348 7.8e-26
UNIPROTKB|Q24K02 1019 IDE "Insulin-degrading enzyme" 0.905 0.206 0.348 8.2e-26
UNIPROTKB|E2RGZ3 1019 IDE "Uncharacterized protein" 0.905 0.206 0.348 8.2e-26
UNIPROTKB|P14735 1019 IDE "Insulin-degrading enzyme" 0.905 0.206 0.348 8.2e-26
RGD|2861 1019 Ide "insulin degrading enzyme" 0.905 0.206 0.348 1.3e-25
TAIR|locus:2054346 AT2G41790 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 890 (318.4 bits), Expect = 3.6e-89, P = 3.6e-89
 Identities = 169/236 (71%), Positives = 196/236 (83%)

Query:     1 MFSTPKAFVKIYFNCPHASSSPESEVLTDIFTRLLLDYLNEYAYYAQVAGLDYGINHTES 60
             MFS PKA+VK+ FNCP A SSP++ VLTDIFTRLL+DYLNEYAYYAQVAGL YG++ +++
Sbjct:   526 MFSKPKAYVKMDFNCPLAVSSPDAAVLTDIFTRLLMDYLNEYAYYAQVAGLYYGVSLSDN 585

Query:    61 GFEVTVVGYNHKLRILLETIFQKIAQFKVKPDRFSVIKEMVTKEYHNNKFLQPFQLAMYY 120
             GFE+T++GYNHKLRILLET+  KIA F+VKPDRF+VIKE VTKEY N KF QP+  AMYY
Sbjct:   586 GFELTLLGYNHKLRILLETVVGKIANFEVKPDRFAVIKETVTKEYQNYKFRQPYHQAMYY 645

Query:   121 CSLILQDQTWPWMEELEVLPHLEAEDLAKFVPMMLSRTFLECYIAG--------SIIQYI 172
             CSLILQDQTWPW EEL+VL HLEAED+AKFVPM+LSRTF+ECYIAG        S++++I
Sbjct:   646 CSLILQDQTWPWTEELDVLSHLEAEDVAKFVPMLLSRTFIECYIAGNVENNEAESMVKHI 705

Query:   173 EDVFFKGSNPICQPLFPSQHLTNRVVKLEKGKNYVYSNQGLNPSDENSCLVHYIQV 228
             EDV F    PIC+PLFPSQHLTNRVVKL +G  Y Y   G NPSDENS LVHYIQV
Sbjct:   706 EDVLFNDPKPICRPLFPSQHLTNRVVKLGEGMKYFYHQDGSNPSDENSALVHYIQV 761
GO:0003824 "catalytic activity" evidence=IEA
GO:0004222 "metalloendopeptidase activity" evidence=IEA;ISS
GO:0005737 "cytoplasm" evidence=ISM
GO:0006508 "proteolysis" evidence=IEA;ISS
GO:0008270 "zinc ion binding" evidence=IEA
GO:0046872 "metal ion binding" evidence=IEA
TAIR|locus:2103523 AT3G57470 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-070410-85 ide "insulin-degrading enzyme" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
ASPGD|ASPL0000015933 AN8044 [Emericella nidulans (taxid:162425)] Back     alignment and assigned GO terms
TAIR|locus:2103513 AT3G57460 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
UNIPROTKB|F1SC98 IDE "Uncharacterized protein" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms
UNIPROTKB|Q24K02 IDE "Insulin-degrading enzyme" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
UNIPROTKB|E2RGZ3 IDE "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
UNIPROTKB|P14735 IDE "Insulin-degrading enzyme" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
RGD|2861 Ide "insulin degrading enzyme" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
O22941PXM16_ARATH3, ., 4, ., 2, 4, ., -0.71610.98270.2350yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query232
COG1025 937 COG1025, Ptr, Secreted/periplasmic Zn-dependent pe 5e-34
PRK15101 961 PRK15101, PRK15101, protease3; Provisional 0.002
>gnl|CDD|223956 COG1025, Ptr, Secreted/periplasmic Zn-dependent peptidases, insulinase-like [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information 
 Score =  128 bits (323), Expect = 5e-34
 Identities = 61/233 (26%), Positives = 103/233 (44%), Gaps = 11/233 (4%)

Query: 3   STPKAFVKIYFNCPHASSSPESEVLTDIFTRLLLDYLNEYAYYAQVAGLDYGINHTESGF 62
             PKA V +    PHAS SP ++VLT+++  L  D L++ +Y A +AGL + +    +G 
Sbjct: 523 VEPKASVSLAIRSPHASRSPRNQVLTELYAYLANDALDKLSYQASLAGLSFSLAANSNGL 582

Query: 63  EVTVVGYNHKLRILLETIFQKIAQFKVKPDRFSVIKEMVTKEYHNNKFLQPFQLAMYYCS 122
           ++T+ G+  +L  LL      +    V  DRF   K  +++E  N    +P++ A+   +
Sbjct: 583 DLTISGFTQRLPQLLRAFLDGLFSLPVDEDRFEQAKSQLSEELKNALTGKPYRQALDGLT 642

Query: 123 LILQDQTWPWMEELEVLPHLEAEDLAKFVPMMLSRTFLECYIAGSI-----IQYIEDVFF 177
            +LQ   W   E    L  +  E+ A F   +L+   LE  + G++         E +  
Sbjct: 643 GLLQVPYWSREERRNALESVSVEEFAAFRDTLLNGVHLEMLVLGNLTEADATNLAETLQK 702

Query: 178 KGSNPICQPLFPSQHLTNRVVKLEKGKNYVYSNQGLNPSDENSCLVHYIQVQE 230
           K       P   S    N  V L KG   ++   G      N+ +++  Q  E
Sbjct: 703 K------LPAIGSTWYRNPSVYLLKGGTRIFETVGGESDSANAAILYPQQYDE 749

Length = 937
>gnl|CDD|185056 PRK15101, PRK15101, protease3; Provisional Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 232
KOG0959 974 consensus N-arginine dibasic convertase NRD1 and r 100.0
COG1025 937 Ptr Secreted/periplasmic Zn-dependent peptidases, 100.0
PRK15101 961 protease3; Provisional 99.95
COG0612 438 PqqL Predicted Zn-dependent peptidases [General fu 99.07
TIGR02110 696 PQQ_syn_pqqF coenzyme PQQ biosynthesis probable pe 98.96
PF00675149 Peptidase_M16: Insulinase (Peptidase family M16) T 98.64
PRK15101 961 protease3; Provisional 98.59
KOG0960 467 consensus Mitochondrial processing peptidase, beta 98.32
PTZ00432 1119 falcilysin; Provisional 97.33
KOG2067 472 consensus Mitochondrial processing peptidase, alph 97.13
KOG2583 429 consensus Ubiquinol cytochrome c reductase, subuni 96.66
COG0612438 PqqL Predicted Zn-dependent peptidases [General fu 96.47
KOG2067472 consensus Mitochondrial processing peptidase, alph 96.22
COG1025937 Ptr Secreted/periplasmic Zn-dependent peptidases, 96.08
PF05193184 Peptidase_M16_C: Peptidase M16 inactive domain; In 95.37
PF05193184 Peptidase_M16_C: Peptidase M16 inactive domain; In 94.86
PTZ00432 1119 falcilysin; Provisional 94.58
COG1026 978 Predicted Zn-dependent peptidases, insulinase-like 94.53
COG1026 978 Predicted Zn-dependent peptidases, insulinase-like 93.35
KOG0960467 consensus Mitochondrial processing peptidase, beta 90.66
PF08367248 M16C_assoc: Peptidase M16C associated; InterPro: I 90.28
KOG0959 974 consensus N-arginine dibasic convertase NRD1 and r 88.82
>KOG0959 consensus N-arginine dibasic convertase NRD1 and related Zn2+-dependent endopeptidases, insulinase superfamily [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information 
Probab=100.00  E-value=8.3e-39  Score=295.02  Aligned_cols=228  Identities=40%  Similarity=0.719  Sum_probs=213.0

Q ss_pred             CCCCceeEEEEEEeCCCCCCCHHHHHHHHHHHHHHHHhhhhhhhcccccccEEEEEeeCceeEEEEeeccchHHHHHHHH
Q 026844            1 MFSTPKAFVKIYFNCPHASSSPESEVLTDIFTRLLLDYLNEYAYYAQVAGLDYGINHTESGFEVTVVGYNHKLRILLETI   80 (232)
Q Consensus         1 ~F~~Pk~~i~~~i~~~~~~~s~~~~~l~~l~~~ll~~~l~e~~y~A~~Agl~~~i~~~~~g~~l~v~G~s~kl~~ll~~i   80 (232)
                      .|++||+++.+.+.+|.+..+|.+++++.+|+.++.+.++|..|+|..||+++++..+.+|+.++|+||+||++.+++.+
T Consensus       528 ~f~~Pka~~~~~~~~p~~~~~~~~~~l~~l~~~~l~d~l~E~~Y~A~~aGl~~~~~~s~~G~~~~v~Gfnekl~~ll~~~  607 (974)
T KOG0959|consen  528 KFNVPKAYTKFDFICPGATQSPLNSVLSTLYVRLLKDQLNEYLYPALLAGLTYSLSSSSKGVELRVSGFNEKLPLLLEKV  607 (974)
T ss_pred             ccccchhheeeeecCcccccCHHHHHHHHHHHHHHHHHHhHHHHHHHhccceEEeeecCCceEEEEeccCcccHHHHHHH
Confidence            48999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHhhcCCCChhhHHHHHHHHHHHhhhhcccChHHHHHHHHHHhccCCCCChHHHHhhCCCCCHHHHHHHHHHHHhhHhh
Q 026844           81 FQKIAQFKVKPDRFSVIKEMVTKEYHNNKFLQPFQLAMYYCSLILQDQTWPWMEELEVLPHLEAEDLAKFVPMMLSRTFL  160 (232)
Q Consensus        81 ~~~l~~~~~~~~~F~~~k~~~~~~~~n~~~~~p~~~a~~~~~~~l~~~~~~~~~~l~~l~~it~edl~~f~~~~~~~~~~  160 (232)
                      ++.+.++.+++++|+.+|+.+.++|+|...++|+.+|.+++..++.+..|+.++++++++.+|++|+..|...++++.++
T Consensus       608 ~~~~~~f~~~~~rf~iike~~~~~~~n~~~~~p~~~a~~~~~lll~~~~W~~~e~~~al~~~~le~~~~F~~~~~~~~~~  687 (974)
T KOG0959|consen  608 VQMMANFELDEDRFEIIKELLKRELRNHAFDNPYQLANDYLLLLLEESIWSKEELLEALDDVTLEDLESFISEFLQPFHL  687 (974)
T ss_pred             HHHHHhccccHHHHHHHHHHHHHHHhhhhhccHHHHHHHHHHHHhhccccchHHHHHHhhcccHHHHHHHHHHHhhhhhe
Confidence            99999999999999999999999999988888999999999999999999999999999999999999999999999999


Q ss_pred             hheeccccH--------HHHHHHhccCCCCCCCCCCCCCcCccceEEeCCCCcEEEeecCCCCCCCCeeEEEEEEeCC
Q 026844          161 ECYIAGSII--------QYIEDVFFKGSNPICQPLFPSQHLTNRVVKLEKGKNYVYSNQGLNPSDENSCLVHYIQVQE  230 (232)
Q Consensus       161 ~~lv~Gni~--------~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~~~~~~~~~~Ns~v~~y~Q~G~  230 (232)
                      ++||+||+.        +.+.+.+ ....|.+.|+.+.+....+.+.||.|.+++|+.. .|+.|+|||+++|||+|.
T Consensus       688 e~~i~GN~te~~A~~l~~~v~d~l-~~~~~~~~p~~~~~~~~~~~~~lp~G~~~~~~~~-~n~~~~ns~i~~~~Q~~~  763 (974)
T KOG0959|consen  688 ELLIHGNLTEKEALQLLKSVLDIL-KSAAPNSRPLFRSEHLPRREIQLPNGDYYFYRHL-LNKTDDNSCIEVYYQIGV  763 (974)
T ss_pred             EEEEecCcchHHHHHHHHHHHhhh-hccCCCCccccccccCcccceeccCCceEEEEcc-cccCCCCceEEEEEEccc
Confidence            999999764        4555566 3333447788788888999999999999887766 789999999999999974

>COG1025 Ptr Secreted/periplasmic Zn-dependent peptidases, insulinase-like [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PRK15101 protease3; Provisional Back     alignment and domain information
>COG0612 PqqL Predicted Zn-dependent peptidases [General function prediction only] Back     alignment and domain information
>TIGR02110 PQQ_syn_pqqF coenzyme PQQ biosynthesis probable peptidase PqqF Back     alignment and domain information
>PF00675 Peptidase_M16: Insulinase (Peptidase family M16) This is family M16 in the peptidase classification Back     alignment and domain information
>PRK15101 protease3; Provisional Back     alignment and domain information
>KOG0960 consensus Mitochondrial processing peptidase, beta subunit, and related enzymes (insulinase superfamily) [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PTZ00432 falcilysin; Provisional Back     alignment and domain information
>KOG2067 consensus Mitochondrial processing peptidase, alpha subunit [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>KOG2583 consensus Ubiquinol cytochrome c reductase, subunit QCR2 [Energy production and conversion] Back     alignment and domain information
>COG0612 PqqL Predicted Zn-dependent peptidases [General function prediction only] Back     alignment and domain information
>KOG2067 consensus Mitochondrial processing peptidase, alpha subunit [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>COG1025 Ptr Secreted/periplasmic Zn-dependent peptidases, insulinase-like [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PF05193 Peptidase_M16_C: Peptidase M16 inactive domain; InterPro: IPR007863 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families Back     alignment and domain information
>PF05193 Peptidase_M16_C: Peptidase M16 inactive domain; InterPro: IPR007863 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families Back     alignment and domain information
>PTZ00432 falcilysin; Provisional Back     alignment and domain information
>COG1026 Predicted Zn-dependent peptidases, insulinase-like [General function prediction only] Back     alignment and domain information
>COG1026 Predicted Zn-dependent peptidases, insulinase-like [General function prediction only] Back     alignment and domain information
>KOG0960 consensus Mitochondrial processing peptidase, beta subunit, and related enzymes (insulinase superfamily) [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PF08367 M16C_assoc: Peptidase M16C associated; InterPro: IPR013578 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families Back     alignment and domain information
>KOG0959 consensus N-arginine dibasic convertase NRD1 and related Zn2+-dependent endopeptidases, insulinase superfamily [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query232
3qz2_A 990 The Structure Of Cysteine-Free Human Insulin Degrad 8e-29
3e4a_A 1019 Human Ide-Inhibitor Complex At 2.6 Angstrom Resolut 8e-29
2wby_A 990 Crystal Structure Of Human Insulin-Degrading Enzyme 8e-29
3e4z_A 990 Crystal Structure Of Human Insulin Degrading Enzyme 9e-29
3hgz_A 969 Crystal Structure Of Human Insulin-Degrading Enzyme 9e-29
3cww_A 990 Crystal Structure Of Ide-Bradykinin Complex Length 1e-28
2jg4_A 990 Substrate-Free Ide Structure In Its Closed Conforma 7e-28
2g47_A 990 Crystal Structure Of Human Insulin-Degrading Enzyme 7e-28
3p7o_A 1019 Rat Insulin Degrading Enzyme (Insulysin) E111f Muta 1e-27
3p7l_A 978 Rat Insulin Degrading Enzyme (Insulysin) Length = 9 1e-27
3tuv_A 1019 Crystal Structure Of Insulysin With Bound Atp Lengt 1e-27
>pdb|3QZ2|A Chain A, The Structure Of Cysteine-Free Human Insulin Degrading Enzyme Length = 990 Back     alignment and structure 
Iteration: 1

 Score =  123 bits (309), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 79/227 (34%), Positives = 121/227 (53%), Gaps = 17/227 (7%)
Query: 2   FSTPKAFVKIYFNCPHASSSPESEVLTDIFTRLLLDYLNEYAYYAQVAGLDYGINHTESG 61
           F  PKA +   F  P A   P    +  ++  LL D LNEYAY A++AGL Y + +T  G
Sbjct: 538 FFLPKANLNFEFFSPFAYVDPLHSNMAYLYLELLKDSLNEYAYAAELAGLSYDLQNTIYG 597
Query: 62  FEVTVVGYNHKLRILLETIFQKIAQFKVKPDRFSVIKEMVTKEYHNNKFLQPFQLAMYYC 121
             ++V GYN K  ILL+ I +K+A F++   RF +IKE   +  +N +  QP Q AMYY 
Sbjct: 598 MYLSVKGYNDKQPILLKKIIEKMATFEIDEKRFEIIKEAYMRSLNNFRAEQPHQHAMYYL 657
Query: 122 SLILQDQTWPWMEELEVLPHLEAEDLAKFVPMMLSRTFLECYIAGS--------IIQYIE 173
            L++ +  W   E  E L  +    L  F+P +LSR  +E  + G+        I+Q +E
Sbjct: 658 RLLMTEVAWTKDELKEALDDVTLPRLKAFIPQLLSRLHIEALLHGNITKQAALGIMQMVE 717
Query: 174 DVFFKGSNPICQPLFPSQHLTNRVVKL-EKG------KNYVYSNQGL 213
           D   + ++   +PL PSQ +  R V+L ++G      +N V++N G+
Sbjct: 718 DTLIEHAH--TKPLLPSQLVRYREVQLPDRGWFVYQQRNEVHNNSGI 762
>pdb|3E4A|A Chain A, Human Ide-Inhibitor Complex At 2.6 Angstrom Resolution Length = 1019 Back     alignment and structure
>pdb|2WBY|A Chain A, Crystal Structure Of Human Insulin-Degrading Enzyme In Complex With Insulin Length = 990 Back     alignment and structure
>pdb|3E4Z|A Chain A, Crystal Structure Of Human Insulin Degrading Enzyme In Complex With Insulin-Like Growth Factor Ii Length = 990 Back     alignment and structure
>pdb|3HGZ|A Chain A, Crystal Structure Of Human Insulin-Degrading Enzyme In Complex With Amylin Length = 969 Back     alignment and structure
>pdb|3CWW|A Chain A, Crystal Structure Of Ide-Bradykinin Complex Length = 990 Back     alignment and structure
>pdb|2JG4|A Chain A, Substrate-Free Ide Structure In Its Closed Conformation Length = 990 Back     alignment and structure
>pdb|2G47|A Chain A, Crystal Structure Of Human Insulin-Degrading Enzyme In Complex With Amyloid-Beta (1-40) Length = 990 Back     alignment and structure
>pdb|3P7O|A Chain A, Rat Insulin Degrading Enzyme (Insulysin) E111f Mutant With Two Bound Peptides Length = 1019 Back     alignment and structure
>pdb|3P7L|A Chain A, Rat Insulin Degrading Enzyme (Insulysin) Length = 978 Back     alignment and structure
>pdb|3TUV|A Chain A, Crystal Structure Of Insulysin With Bound Atp Length = 1019 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query232
3cww_A 990 Insulysin, insulin-degrading enzyme, insulinase; A 1e-49
1q2l_A 939 Protease III; hydrolase; 2.20A {Escherichia coli s 1e-41
>3cww_A Insulysin, insulin-degrading enzyme, insulinase; A-beta degrading enzyme, criptidase, kinins, hydrolase; 1.96A {Homo sapiens} PDB: 3ofi_A 2wc0_A 3h44_A 3n56_A 3n57_A 2wby_A 3qz2_A 3e4z_A 2wk3_A 3e4a_A* 2g47_A 2g48_A 2g49_A 2g54_A 2g56_A 2jbu_A 3e50_A 2jg4_A 3hgz_A 2yb3_A* ... Length = 990 Back     alignment and structure
 Score =  172 bits (437), Expect = 1e-49
 Identities = 81/235 (34%), Positives = 116/235 (49%), Gaps = 12/235 (5%)

Query: 2   FSTPKAFVKIYFNCPHASSSPESEVLTDIFTRLLLDYLNEYAYYAQVAGLDYGINHTESG 61
           F  PKA +   F  P A   P    +  ++  LL D LNEYAY A++AGL Y + +T  G
Sbjct: 538 FFLPKANLNFEFFSPFAYVDPLHSNMAYLYLELLKDSLNEYAYAAELAGLSYDLQNTIYG 597

Query: 62  FEVTVVGYNHKLRILLETIFQKIAQFKVKPDRFSVIKEMVTKEYHNNKFLQPFQLAMYYC 121
             ++V GYN K  ILL+ I +K+A F++   RF +IKE   +  +N +  QP Q AMYY 
Sbjct: 598 MYLSVKGYNDKQPILLKKIIEKMATFEIDEARFEIIKEAYMRSLNNFRAEQPHQHAMYYL 657

Query: 122 SLILQDQTWPWMEELEVLPHLEAEDLAKFVPMMLSRTFLECYIAG--------SIIQYIE 173
            L++ +  W   E  E L  +    L  F+P +LSR  +E  + G         I+Q +E
Sbjct: 658 RLLMTEVAWTKDELKEALADVTLPRLKAFIPQLLSRLHIEALLHGNITKQAALGIMQMVE 717

Query: 174 DVFFKGSNPICQPLFPSQHLTNRVVKLEKGKNYVYSNQGLNPSDENSCLVHYIQV 228
           D      +   +PL PSQ    R V+L     +VY  +  N    NS +  Y Q 
Sbjct: 718 DTLI--EHAHTKPLLPSQLAAYREVQLPDRGWFVYQQR--NEVHNNSGIEIYYQT 768
>1q2l_A Protease III; hydrolase; 2.20A {Escherichia coli str} SCOP: d.185.1.1 d.185.1.1 d.185.1.1 d.185.1.1 Length = 939 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query232
3cww_A 990 Insulysin, insulin-degrading enzyme, insulinase; A 99.92
1q2l_A 939 Protease III; hydrolase; 2.20A {Escherichia coli s 99.91
3cx5_A 431 Cytochrome B-C1 complex subunit 1, mitochondrial; 99.6
3gwb_A 434 Peptidase M16 inactive domain family protein; pept 99.54
3amj_B 424 Zinc peptidase inactive subunit; alpha/beta, zinc 99.49
1pp9_B 439 Ubiquinol-cytochrome C reductase complex core Pro 99.47
3d3y_A 425 Uncharacterized protein; APC29635, conserved prote 99.47
1hr6_A 475 Alpha-MPP, mitochondrial processing peptidase alph 99.43
3hdi_A 421 Processing protease; CAGE structure, M16B peptidas 99.27
3eoq_A 406 Putative zinc protease; two similar domains of bet 99.22
3cx5_B 352 Cytochrome B-C1 complex subunit 2, mitochondrial; 99.17
2fge_A 995 Atprep2;, zinc metalloprotease (insulinase family) 99.16
3ami_A 445 Zinc peptidase; alpha/beta, zinc binding, hydrolas 99.15
1pp9_A 446 Ubiquinol-cytochrome C reductase complex core Pro 99.06
1hr6_B 443 Beta-MPP, mitochondrial processing peptidase beta 99.03
3go9_A 492 Insulinase family protease; IDP00573, structural g 98.77
3ih6_A197 Putative zinc protease; bordetella pertussis toham 98.68
1q2l_A 939 Protease III; hydrolase; 2.20A {Escherichia coli s 98.54
3cww_A 990 Insulysin, insulin-degrading enzyme, insulinase; A 98.35
3gwb_A434 Peptidase M16 inactive domain family protein; pept 98.19
1pp9_B439 Ubiquinol-cytochrome C reductase complex core Pro 98.15
3amj_B424 Zinc peptidase inactive subunit; alpha/beta, zinc 98.14
3eoq_A406 Putative zinc protease; two similar domains of bet 98.11
3ami_A445 Zinc peptidase; alpha/beta, zinc binding, hydrolas 98.11
3hdi_A421 Processing protease; CAGE structure, M16B peptidas 98.09
3cx5_A431 Cytochrome B-C1 complex subunit 1, mitochondrial; 98.08
1hr6_B443 Beta-MPP, mitochondrial processing peptidase beta 98.0
1hr6_A475 Alpha-MPP, mitochondrial processing peptidase alph 97.97
3d3y_A425 Uncharacterized protein; APC29635, conserved prote 97.96
1pp9_A446 Ubiquinol-cytochrome C reductase complex core Pro 97.91
3s5m_A 1193 Falcilysin; M16 metalloprotease, peptidase, hydrol 97.7
3go9_A492 Insulinase family protease; IDP00573, structural g 97.66
2fge_A 995 Atprep2;, zinc metalloprotease (insulinase family) 97.54
3s5m_A 1193 Falcilysin; M16 metalloprotease, peptidase, hydrol 96.87
>3cww_A Insulysin, insulin-degrading enzyme, insulinase; A-beta degrading enzyme, criptidase, kinins, hydrolase; 1.96A {Homo sapiens} PDB: 3ofi_A 2wc0_A 3h44_A 3n56_A 3n57_A 2wby_A 3qz2_A 3e4z_A 2wk3_A 3e4a_A* 2g47_A 2g48_A 2g49_A 2g54_A 2g56_A 2jbu_A 3e50_A 2jg4_A 3hgz_A 2yb3_A* ... Back     alignment and structure
Probab=99.92  E-value=5.9e-24  Score=203.03  Aligned_cols=225  Identities=36%  Similarity=0.568  Sum_probs=190.5

Q ss_pred             CCCceeEEEEEEeCCCCCCCHHHHHHHHHHHHHHHHhhhhhhhcccccccEEEEEeeCceeEEEEeeccchHHHHHHHHH
Q 026844            2 FSTPKAFVKIYFNCPHASSSPESEVLTDIFTRLLLDYLNEYAYYAQVAGLDYGINHTESGFEVTVVGYNHKLRILLETIF   81 (232)
Q Consensus         2 F~~Pk~~i~~~i~~~~~~~s~~~~~l~~l~~~ll~~~l~e~~y~A~~Agl~~~i~~~~~g~~l~v~G~s~kl~~ll~~i~   81 (232)
                      |++|++.+++.+.+|....++++.+++.|++.++.+.+++..|.+.++|++++++.+.+|+.++++|++++++.+++.+.
T Consensus       538 f~~P~~~i~~~~~~~~~~~~~~~~~~~~L~~~ll~~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~g~~~~l~~~l~ll~  617 (990)
T 3cww_A          538 FFLPKANLNFEFFSPFAYVDPLHSNMAYLYLELLKDSLNEYAYAAELAGLSYDLQNTIYGMYLSVKGYNDKQPILLKKII  617 (990)
T ss_dssp             CCCSEEEEEEEEECGGGTSSHHHHHHHHHHHHHHHHHHHHHHHHHHHTTEEEEEEEETTEEEEEEEEESTTHHHHHHHHH
T ss_pred             cCCCcEEEEEEEeCCCCCCCHHHHHHHHHHHHHHHHHHHHhhhHHHhCCeEEEEEEcCCeEEEEEEeccHhHHHHHHHHH
Confidence            78999999999999988889999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHhhcCCCChhhHHHHHHHHHHHhhhhcccChHHHHHHHHHHhccCCCCChHHHHhhCCCCCHHHHHHHHHHHHhhHhhh
Q 026844           82 QKIAQFKVKPDRFSVIKEMVTKEYHNNKFLQPFQLAMYYCSLILQDQTWPWMEELEVLPHLEAEDLAKFVPMMLSRTFLE  161 (232)
Q Consensus        82 ~~l~~~~~~~~~F~~~k~~~~~~~~n~~~~~p~~~a~~~~~~~l~~~~~~~~~~l~~l~~it~edl~~f~~~~~~~~~~~  161 (232)
                      +.+.++.+++++|+.+|+++.++++|...+.|+.+|...+..++.++.|..++.+++|+++|.+|+.+|++.+++..+++
T Consensus       618 ~~l~~p~~~~~~f~~~k~~~~~~~~~~~~~~p~~~a~~~~~~~l~~~~~~~~~~~~~l~~lt~~~l~~~~~~~~~~~~~~  697 (990)
T 3cww_A          618 EKMATFEIDEARFEIIKEAYMRSLNNFRAEQPHQHAMYYLRLLMTEVAWTKDELKEALADVTLPRLKAFIPQLLSRLHIE  697 (990)
T ss_dssp             HHHHTCCCCHHHHHHHHHHHHHHHHHGGGSCHHHHHHHHHHHHHBSSCCCHHHHHHHHTTCCHHHHHHHHHHHHHEEEEE
T ss_pred             HHHhcCCCCHHHHHHHHHHHHHHHHhhhhcChHHHHHHHHHHHhCCCCCCHHHHHHHHhcCCHHHHHHHHHHHHhhheEE
Confidence            99999999999999999999999999988669999999999999988999989999999999999999999999999999


Q ss_pred             heeccccHH--------HHHHHhccCCCCCCCCCCCCCcCccceEEeCCCCcEEEeecCCCCCCCCeeEEEEEEeCC
Q 026844          162 CYIAGSIIQ--------YIEDVFFKGSNPICQPLFPSQHLTNRVVKLEKGKNYVYSNQGLNPSDENSCLVHYIQVQE  230 (232)
Q Consensus       162 ~lv~Gni~~--------~i~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~~~~~~~~~~Ns~v~~y~Q~G~  230 (232)
                      ++|+||+..        .+.+.+.....  +.+.++.+.+..+.+.++.|..+++..  .++++.|+++..|+|.|.
T Consensus       698 ~~v~Gn~~~~~~~~~~~~~~~~l~~l~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~v~~~~~~~~  770 (990)
T 3cww_A          698 ALLHGNITKQAALGIMQMVEDTLIEHAH--TKPLLPSQLAAYREVQLPDRGWFVYQQ--RNEVHNNSGIEIYYQTDM  770 (990)
T ss_dssp             EEEEESCCHHHHHHHHHHHHHHHHHHHC--CEECCGGGCCCCCBBCCCTTEEEEEEE--ECSSCSSEEEEEEEEEEE
T ss_pred             EEEEcCCCHHHHHHHHHHHHHHHhccCC--CCCCchhhccccceEEcCCCCeEEEEe--cCCCCCCcEEEEEEeCCC
Confidence            999998742        23344421111  112111112233445667776655543  345788999999999873
>1q2l_A Protease III; hydrolase; 2.20A {Escherichia coli str} SCOP: d.185.1.1 d.185.1.1 d.185.1.1 d.185.1.1 Back     alignment and structure
>3cx5_A Cytochrome B-C1 complex subunit 1, mitochondrial; complex III, electron transfer complex, cytochrome BC1 complex, mitochondrialtransmembrane complex; HET: M3L SUC 6PH UMQ HEM SMA 8PE 9PE CN5 7PH CN3; 1.90A {Saccharomyces cerevisiae} SCOP: d.185.1.1 d.185.1.1 PDB: 1p84_A* 2ibz_A* 1kb9_A* 3cxh_A* 1ezv_A* 1kyo_A* Back     alignment and structure
>3gwb_A Peptidase M16 inactive domain family protein; peptidase M16 family, PFL_5859, structural genomics, PSI-2, structure initiative; 1.90A {Pseudomonas fluorescens} Back     alignment and structure
>3amj_B Zinc peptidase inactive subunit; alpha/beta, zinc binding, hydrolase; 3.00A {Sphingomonas} Back     alignment and structure
>1pp9_B Ubiquinol-cytochrome C reductase complex core Pro mitochondrial; cytochrome BC1, membrane protein, heme protein, rieske iron protein, cytochrome B, complex III; HET: BHG HEM HEC SMA UQ CDL PEE; 2.10A {Bos taurus} SCOP: d.185.1.1 d.185.1.1 PDB: 1bgy_B* 1be3_B* 1l0n_B* 1ntk_B* 1ntm_B* 1ntz_B* 1nu1_B* 1l0l_B* 1ppj_B* 1sqq_B* 1sqv_B* 1sqx_B* 2a06_B* 2fyu_B* 2ybb_B* 1sqb_B* 1sqp_B* 1qcr_B* 2bcc_B* 3bcc_B* ... Back     alignment and structure
>3d3y_A Uncharacterized protein; APC29635, conserved protein, enterococcus faecalis V583, STR genomics, PSI-2, protein structure initiative; 1.95A {Enterococcus faecalis} Back     alignment and structure
>1hr6_A Alpha-MPP, mitochondrial processing peptidase alpha subunit; hxxeh zinc-binding motif, hydrolase; HET: EPE; 2.50A {Saccharomyces cerevisiae} SCOP: d.185.1.1 d.185.1.1 PDB: 1hr7_A 1hr8_A* 1hr9_A* Back     alignment and structure
>3hdi_A Processing protease; CAGE structure, M16B peptidase, metallopeptidase, peptidasome, protease, hydrolase; 2.70A {Bacillus halodurans c-125} Back     alignment and structure
>3eoq_A Putative zinc protease; two similar domains of beta(2)-alpha(2)-beta(2)-alpha(5)- beta structure, hydrolase; 2.29A {Thermus thermophilus} Back     alignment and structure
>3cx5_B Cytochrome B-C1 complex subunit 2, mitochondrial; complex III, electron transfer complex, cytochrome BC1 complex, mitochondrialtransmembrane complex; HET: M3L SUC 6PH UMQ HEM SMA 8PE 9PE CN5 7PH CN3; 1.90A {Saccharomyces cerevisiae} SCOP: d.185.1.1 d.185.1.1 PDB: 1kb9_B* 1kyo_B* 1p84_B* 2ibz_B* 1ezv_B* 3cxh_B* Back     alignment and structure
>2fge_A Atprep2;, zinc metalloprotease (insulinase family); peptidasome, protease-peptide complex, hydrolase, plant protein; 2.10A {Arabidopsis thaliana} SCOP: d.185.1.1 d.185.1.1 d.185.1.1 d.185.1.1 Back     alignment and structure
>3ami_A Zinc peptidase; alpha/beta, zinc binding, hydrolase; 2.40A {Sphingomonas} PDB: 3amj_C Back     alignment and structure
>1pp9_A Ubiquinol-cytochrome C reductase complex core Pro mitochondrial; cytochrome BC1, membrane protein, heme protein, rieske iron protein, cytochrome B, complex III; HET: BHG HEM HEC SMA UQ CDL PEE; 2.10A {Bos taurus} SCOP: d.185.1.1 d.185.1.1 PDB: 1bgy_A* 1be3_A* 1l0n_A* 1ntk_A* 1ntm_A* 1ntz_A* 1nu1_A* 1l0l_A* 1ppj_A* 1sqq_A* 1sqv_A* 1sqx_A* 2a06_A* 2fyu_A* 2ybb_A* 1sqb_A* 1sqp_A* 1qcr_A* 1bcc_A* 2bcc_A* ... Back     alignment and structure
>1hr6_B Beta-MPP, mitochondrial processing peptidase beta subunit; hxxeh zinc-binding motif, hydrolase; HET: EPE; 2.50A {Saccharomyces cerevisiae} SCOP: d.185.1.1 d.185.1.1 PDB: 1hr7_B 1hr8_B* 1hr9_B* Back     alignment and structure
>3go9_A Insulinase family protease; IDP00573, structural genomics, for structural genomics of infectious diseases, csgid, HYDR; HET: MSE; 1.62A {Yersinia pestis} Back     alignment and structure
>3ih6_A Putative zinc protease; bordetella pertussis tohama I, struc genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 2.15A {Bordetella pertussis} PDB: 3ivl_A Back     alignment and structure
>1q2l_A Protease III; hydrolase; 2.20A {Escherichia coli str} SCOP: d.185.1.1 d.185.1.1 d.185.1.1 d.185.1.1 Back     alignment and structure
>3cww_A Insulysin, insulin-degrading enzyme, insulinase; A-beta degrading enzyme, criptidase, kinins, hydrolase; 1.96A {Homo sapiens} PDB: 3ofi_A 2wc0_A 3h44_A 3n56_A 3n57_A 2wby_A 3qz2_A 3e4z_A 2wk3_A 3e4a_A* 2g47_A 2g48_A 2g49_A 2g54_A 2g56_A 2jbu_A 3e50_A 2jg4_A 3hgz_A 2yb3_A* ... Back     alignment and structure
>3gwb_A Peptidase M16 inactive domain family protein; peptidase M16 family, PFL_5859, structural genomics, PSI-2, structure initiative; 1.90A {Pseudomonas fluorescens} Back     alignment and structure
>1pp9_B Ubiquinol-cytochrome C reductase complex core Pro mitochondrial; cytochrome BC1, membrane protein, heme protein, rieske iron protein, cytochrome B, complex III; HET: BHG HEM HEC SMA UQ CDL PEE; 2.10A {Bos taurus} SCOP: d.185.1.1 d.185.1.1 PDB: 1bgy_B* 1be3_B* 1l0n_B* 1ntk_B* 1ntm_B* 1ntz_B* 1nu1_B* 1l0l_B* 1ppj_B* 1sqq_B* 1sqv_B* 1sqx_B* 2a06_B* 2fyu_B* 2ybb_B* 1sqb_B* 1sqp_B* 1qcr_B* 2bcc_B* 3bcc_B* ... Back     alignment and structure
>3amj_B Zinc peptidase inactive subunit; alpha/beta, zinc binding, hydrolase; 3.00A {Sphingomonas} Back     alignment and structure
>3eoq_A Putative zinc protease; two similar domains of beta(2)-alpha(2)-beta(2)-alpha(5)- beta structure, hydrolase; 2.29A {Thermus thermophilus} Back     alignment and structure
>3ami_A Zinc peptidase; alpha/beta, zinc binding, hydrolase; 2.40A {Sphingomonas} PDB: 3amj_C Back     alignment and structure
>3hdi_A Processing protease; CAGE structure, M16B peptidase, metallopeptidase, peptidasome, protease, hydrolase; 2.70A {Bacillus halodurans c-125} Back     alignment and structure
>3cx5_A Cytochrome B-C1 complex subunit 1, mitochondrial; complex III, electron transfer complex, cytochrome BC1 complex, mitochondrialtransmembrane complex; HET: M3L SUC 6PH UMQ HEM SMA 8PE 9PE CN5 7PH CN3; 1.90A {Saccharomyces cerevisiae} SCOP: d.185.1.1 d.185.1.1 PDB: 1p84_A* 2ibz_A* 1kb9_A* 3cxh_A* 1ezv_A* 1kyo_A* Back     alignment and structure
>1hr6_B Beta-MPP, mitochondrial processing peptidase beta subunit; hxxeh zinc-binding motif, hydrolase; HET: EPE; 2.50A {Saccharomyces cerevisiae} SCOP: d.185.1.1 d.185.1.1 PDB: 1hr7_B 1hr8_B* 1hr9_B* Back     alignment and structure
>1hr6_A Alpha-MPP, mitochondrial processing peptidase alpha subunit; hxxeh zinc-binding motif, hydrolase; HET: EPE; 2.50A {Saccharomyces cerevisiae} SCOP: d.185.1.1 d.185.1.1 PDB: 1hr7_A 1hr8_A* 1hr9_A* Back     alignment and structure
>3d3y_A Uncharacterized protein; APC29635, conserved protein, enterococcus faecalis V583, STR genomics, PSI-2, protein structure initiative; 1.95A {Enterococcus faecalis} Back     alignment and structure
>1pp9_A Ubiquinol-cytochrome C reductase complex core Pro mitochondrial; cytochrome BC1, membrane protein, heme protein, rieske iron protein, cytochrome B, complex III; HET: BHG HEM HEC SMA UQ CDL PEE; 2.10A {Bos taurus} SCOP: d.185.1.1 d.185.1.1 PDB: 1bgy_A* 1be3_A* 1l0n_A* 1ntk_A* 1ntm_A* 1ntz_A* 1nu1_A* 1l0l_A* 1ppj_A* 1sqq_A* 1sqv_A* 1sqx_A* 2a06_A* 2fyu_A* 2ybb_A* 1sqb_A* 1sqp_A* 1qcr_A* 1bcc_A* 2bcc_A* ... Back     alignment and structure
>3s5m_A Falcilysin; M16 metalloprotease, peptidase, hydrolase; 1.55A {Plasmodium falciparum} PDB: 3s5i_A 3s5k_A 3s5h_A Back     alignment and structure
>3go9_A Insulinase family protease; IDP00573, structural genomics, for structural genomics of infectious diseases, csgid, HYDR; HET: MSE; 1.62A {Yersinia pestis} Back     alignment and structure
>2fge_A Atprep2;, zinc metalloprotease (insulinase family); peptidasome, protease-peptide complex, hydrolase, plant protein; 2.10A {Arabidopsis thaliana} SCOP: d.185.1.1 d.185.1.1 d.185.1.1 d.185.1.1 Back     alignment and structure
>3s5m_A Falcilysin; M16 metalloprotease, peptidase, hydrolase; 1.55A {Plasmodium falciparum} PDB: 3s5i_A 3s5k_A 3s5h_A Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 232
d1q2la1229 d.185.1.1 (A:504-732) Protease III {Escherichia co 6e-20
>d1q2la1 d.185.1.1 (A:504-732) Protease III {Escherichia coli [TaxId: 562]} Length = 229 Back     information, alignment and structure

class: Alpha and beta proteins (a+b)
fold: LuxS/MPP-like metallohydrolase
superfamily: LuxS/MPP-like metallohydrolase
family: MPP-like
domain: Protease III
species: Escherichia coli [TaxId: 562]

 Score = 82.8 bits (203), Expect = 6e-20
 Identities = 33/180 (18%), Positives = 71/180 (39%), Gaps = 6/180 (3%)

Query: 2   FSTPKAFVKIYFNCPHASSSPESEVLTDIFTRLLLDYLNEYAYYAQVAGLDYGINHTESG 61
            S PKA V +    P A  S  ++V+  +   L    L++ +  A V G+ +   +  +G
Sbjct: 40  ASEPKADVSLILRNPKAMDSARNQVMFALNDYLAGLALDQLSNQASVGGISFST-NANNG 98

Query: 62  FEVTVVGYNHKLRILLETIFQKIAQFKVKPDRFSVIKEMVTKEYHNNKFLQPFQLAMYYC 121
             V   GY  +L  L + + +    +    D+    K    +   + +  + F+ A+   
Sbjct: 99  LMVNANGYTQRLPQLFQALLEGYFSYTATEDQLEQAKSWYNQMMDSAEKGKAFEQAIMPA 158

Query: 122 SLILQDQTWPWMEELEVLPHLEAEDLAKFVPMMLSRTFLECYIAGSI-----IQYIEDVF 176
            ++ Q   +   E  ++LP +  +++  +   + S    E  + G++          DV 
Sbjct: 159 QMLSQVPYFSRDERRKILPSITLKEVLAYRDALKSGARPEFMVIGNMTEAQATTLARDVQ 218

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query232
d1q2la1229 Protease III {Escherichia coli [TaxId: 562]} 99.94
d1hr6b1222 Mitochondrial processing peptidase (MPP) beta chai 99.36
d3cx5a1213 Cytochrome bc1 core subunit 1 {Baker's yeast (Sacc 99.34
d1hr6a1220 Mitochondrial processing peptidase (MPP) alpha cha 99.32
d1ppja1232 Cytochrome bc1 core subunit 1 {Cow (Bos taurus) [T 99.3
d1ppjb1219 Cytochrome bc1 core subunit 2 {Cow (Bos taurus) [T 99.25
d1q2la4240 Protease III {Escherichia coli [TaxId: 562]} 99.15
d3cx5b1202 Cytochrome bc1 core subunit 2 {Baker's yeast (Sacc 99.09
d1ppjb2204 Cytochrome bc1 core subunit 2 {Cow (Bos taurus) [T 98.74
d1hr6b2217 Mitochondrial processing peptidase (MPP) beta chai 98.59
d1q2la2228 Protease III {Escherichia coli [TaxId: 562]} 98.58
d1hr6a2237 Mitochondrial processing peptidase (MPP) alpha cha 98.47
d1ppja2209 Cytochrome bc1 core subunit 1 {Cow (Bos taurus) [T 98.46
d3cx5a2218 Cytochrome bc1 core subunit 1 {Baker's yeast (Sacc 98.04
d2fgea4257 Presequence protease 1, PREP1 {Thale cress (Arabid 97.77
d2fgea2196 Presequence protease 1, PREP1 {Thale cress (Arabid 97.71
d2fgea1258 Presequence protease 1, PREP1 {Thale cress (Arabid 96.88
d2fgea3268 Presequence protease 1, PREP1 {Thale cress (Arabid 88.73
>d1q2la1 d.185.1.1 (A:504-732) Protease III {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
class: Alpha and beta proteins (a+b)
fold: LuxS/MPP-like metallohydrolase
superfamily: LuxS/MPP-like metallohydrolase
family: MPP-like
domain: Protease III
species: Escherichia coli [TaxId: 562]

Probab=99.94  E-value=1.4e-25  Score=178.00  Aligned_cols=167  Identities=19%  Similarity=0.316  Sum_probs=159.8

Q ss_pred             CC-CceeEEEEEEeCCCCCCCHHHHHHHHHHHHHHHHhhhhhhhcccccccEEEEEeeCceeEEEEeeccchHHHHHHHH
Q 026844            2 FS-TPKAFVKIYFNCPHASSSPESEVLTDIFTRLLLDYLNEYAYYAQVAGLDYGINHTESGFEVTVVGYNHKLRILLETI   80 (232)
Q Consensus         2 F~-~Pk~~i~~~i~~~~~~~s~~~~~l~~l~~~ll~~~l~e~~y~A~~Agl~~~i~~~~~g~~l~v~G~s~kl~~ll~~i   80 (232)
                      |. +||+.+.+.+.++....++++.+++.|+..++.+.+++..|.|+.+|+++++.. +.|+.+.++||+++++.+++.+
T Consensus        39 f~~~P~~~i~~~~~~~~~~~~~~~~~l~~L~~~~~~~~~~e~~~~a~~~g~~~~~~~-~~~~~i~~~~~s~~l~~~l~~~  117 (229)
T d1q2la1          39 FASEPKADVSLILRNPKAMDSARNQVMFALNDYLAGLALDQLSNQASVGGISFSTNA-NNGLMVNANGYTQRLPQLFQAL  117 (229)
T ss_dssp             CTTSSEEEEEEEEECGGGGSSHHHHHHHHHHHHHHHHHHHHHHHHHHHTTEEEEEEE-SSEEEEEEEEESSSHHHHHHHH
T ss_pred             cCCCCEEEEEEEEEecccccChhHHHHHHHHHHHHHhhhhhHHHHHHhccccccccc-cceEEEEEEeehHHHHHHHHHH
Confidence            54 799999999999999999999999999999999999999999999999999975 5799999999999999999999


Q ss_pred             HHHhhcCCCChhhHHHHHHHHHHHhhhhcccChHHHHHHHHHHhccCCCCChHHHHhhCCCCCHHHHHHHHHHHHhhHhh
Q 026844           81 FQKIAQFKVKPDRFSVIKEMVTKEYHNNKFLQPFQLAMYYCSLILQDQTWPWMEELEVLPHLEAEDLAKFVPMMLSRTFL  160 (232)
Q Consensus        81 ~~~l~~~~~~~~~F~~~k~~~~~~~~n~~~~~p~~~a~~~~~~~l~~~~~~~~~~l~~l~~it~edl~~f~~~~~~~~~~  160 (232)
                      ++.+.++.++++.|+++|+++++++++.....|+.++...+..+.....|+..+.+++|+++|++|+++|++++++..++
T Consensus       118 ~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~it~~dl~~f~~~~~~~~~~  197 (229)
T d1q2la1         118 LEGYFSYTATEDQLEQAKSWYNQMMDSAEKGKAFEQAIMPAQMLSQVPYFSRDERRKILPSITLKEVLAYRDALKSGARP  197 (229)
T ss_dssp             HHHHHHCCCCSHHHHHHHHHHHHHHHHHSCSCHHHHHHHHHHHTTSSSCCCHHHHHHHGGGCCHHHHHHHHHHHHTTCEE
T ss_pred             HHHhcCccCcHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHhcccCCCcchhhHHHHhhhhHHHHHHHHHHhcCccCE
Confidence            99999999999999999999999999999988999999998888888899999999999999999999999999999999


Q ss_pred             hheeccccH
Q 026844          161 ECYIAGSII  169 (232)
Q Consensus       161 ~~lv~Gni~  169 (232)
                      +++|+||+.
T Consensus       198 ~~~i~Gn~~  206 (229)
T d1q2la1         198 EFMVIGNMT  206 (229)
T ss_dssp             EEEEEESCC
T ss_pred             EEEEEcCCC
Confidence            999999874
>d1hr6b1 d.185.1.1 (B:24-245) Mitochondrial processing peptidase (MPP) beta chain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d3cx5a1 d.185.1.1 (A:27-239) Cytochrome bc1 core subunit 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1hr6a1 d.185.1.1 (A:14-233) Mitochondrial processing peptidase (MPP) alpha chain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1ppja1 d.185.1.1 (A:2-233) Cytochrome bc1 core subunit 1 {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure
>d1ppjb1 d.185.1.1 (B:17-235) Cytochrome bc1 core subunit 2 {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure
>d1q2la4 d.185.1.1 (A:24-263) Protease III {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d3cx5b1 d.185.1.1 (B:17-218) Cytochrome bc1 core subunit 2 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1ppjb2 d.185.1.1 (B:236-439) Cytochrome bc1 core subunit 2 {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure
>d1hr6b2 d.185.1.1 (B:246-462) Mitochondrial processing peptidase (MPP) beta chain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1q2la2 d.185.1.1 (A:733-960) Protease III {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1hr6a2 d.185.1.1 (A:234-470) Mitochondrial processing peptidase (MPP) alpha chain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1ppja2 d.185.1.1 (A:234-442) Cytochrome bc1 core subunit 1 {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure
>d3cx5a2 d.185.1.1 (A:240-457) Cytochrome bc1 core subunit 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d2fgea4 d.185.1.1 (A:15-271) Presequence protease 1, PREP1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Back     information, alignment and structure
>d2fgea2 d.185.1.1 (A:798-993) Presequence protease 1, PREP1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Back     information, alignment and structure
>d2fgea1 d.185.1.1 (A:540-797) Presequence protease 1, PREP1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Back     information, alignment and structure
>d2fgea3 d.185.1.1 (A:272-539) Presequence protease 1, PREP1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Back     information, alignment and structure