Citrus Sinensis ID: 026889


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-
MLFITTLLCFICDFTLLTLLMFLTRILNWGEDRRFDEMRSNLGKLAIFWIFQAVWVWTVSLPVTVVNASDRDPSVQAVDVIGWIMWSVGVSIEAIADQQKLSFKNSPENRGKWCNVGFWKYSRHPNYFGEIFLWWGIFVASTPVLDGAEWLVILGPIFLTLLLLFISGIPLLEESADKKFGNMPAYRLYKKTTSPLIPLPPVVYGNLPWWLKTILFELPLYSRNFPQEGPN
cHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHccccHHHHHHHHHccccccccccccccccHHHHHHHHccccccccccccccc
cHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHccccHHcccHHHccccccHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHccccHHHHHHHHHccccccccHHHHHHcHHHHHHHHHccccccccccccccc
MLFITTLLCFICDFTLLTLLMFLTRILNwgedrrfdEMRSNLGKLAIFWIFQAVWVWTVSLPvtvvnasdrdpsvqaVDVIGWIMWSVGVSIEAIADQQklsfknspenrgkwcnvgfwkysrhpnyfgeIFLWWGIFVastpvldgaeWLVILGPIFLTLLLLFISGiplleesadkkfgnmpayrlykkttspliplppvvygnlpWWLKTILFelplysrnfpqegpn
MLFITTLLCFICDFTLLTLLMFLTRILNWGEDRRFDEMRSNLGKLAIFWIFQAVWVWTVSLPVTVVNASDRDPSVQAVDVIGWIMWSVGVSIEAIADQQklsfknspenrgKWCNVGFWKYSRHPNYFGEIFLWWGIFVASTPVLDGAEWLVILGPIFLTLLLLFISGIPLLEESADKKFGNMPAYRLYKKTTSPLIPLPPVVYGNLPWWLKTILFELPLysrnfpqegpn
MLFITTLLCFICDftlltllmfltRILNWGEDRRFDEMRSNLGKLAIFWIFQAVWVWTVSLPVTVVNASDRDPSVQAVDVIGWIMWSVGVSIEAIADQQKLSFKNSPENRGKWCNVGFWKYSRHPNYFGEIFLWWGIFVASTPVLDGAEWlvilgpifltllllfisgipllEESADKKFGNMPAYRLYKKTTSPLIPLPPVVYGNLPWWLKTILFELPLYSRNFPQEGPN
*LFITTLLCFICDFTLLTLLMFLTRILNWGEDRRFDEMRSNLGKLAIFWIFQAVWVWTVSLPVTVVNASDRDPSVQAVDVIGWIMWSVGVSIEAIADQQKLSFK****NRGKWCNVGFWKYSRHPNYFGEIFLWWGIFVASTPVLDGAEWLVILGPIFLTLLLLFISGIPLLEESADKKFGNMPAYRLYKKTTSPLIPLPPVVYGNLPWWLKTILFELPLYS*********
MLFITTLLCFICDFTLLTLLMFLTRILNWGEDRRFDEMRSNLGKLAIFWIFQAVWVWTVSLPVTVVNASDRDPSVQAVDVIGWIMWSVGVSIEAIADQQKLSFKNSPENRGKWCNVGFWKYSRHPNYFGEIFLWWGIFVASTPVLDGAEWLVILGPIFLTLLLLFISGIPLLEESADKKFGNMPAYRLYKKTTSPLIPLPPVVYGNLPWWLKTILFELPL***********
MLFITTLLCFICDFTLLTLLMFLTRILNWGEDRRFDEMRSNLGKLAIFWIFQAVWVWTVSLPVTVVNASDRDPSVQAVDVIGWIMWSVGVSIEAIADQQKLSFKNSPENRGKWCNVGFWKYSRHPNYFGEIFLWWGIFVASTPVLDGAEWLVILGPIFLTLLLLFISGIPLLEESADKKFGNMPAYRLYKKTTSPLIPLPPVVYGNLPWWLKTILFELPLYSRNFPQEGPN
MLFITTLLCFICDFTLLTLLMFLTRILNWGEDRRFDEMRSNLGKLAIFWIFQAVWVWTVSLPVTVVNASDRDPSVQAVDVIGWIMWSVGVSIEAIADQQKLSFKNSPENRGKWCNVGFWKYSRHPNYFGEIFLWWGIFVASTPVLDGAEWLVILGPIFLTLLLLFISGIPLLEESADKKFGNMPAYRLYKKTTSPLIPLPPVVYGNLPWWLKTILFELPLYSRNF******
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oooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooo
ooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
ooooooooooooHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
oooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
SSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MLFITTLLCFICDFTLLTLLMFLTRILNWGEDRRFDEMRSNLGKLAIFWIFQAVWVWTVSLPVTVVNASDRDPSVQAVDVIGWIMWSVGVSIEAIADQQKLSFKNSPENRGKWCNVGFWKYSRHPNYFGEIFLWWGIFVASTPVLDGAEWLVILGPIFLTLLLLFISGIPLLEESADKKFGNMPAYRLYKKTTSPLIPLPPVVYGNLPWWLKTILFELPLYSRNFPQEGPN
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query231
297734310307 unnamed protein product [Vitis vinifera] 0.978 0.736 0.807 1e-102
359491022291 PREDICTED: uncharacterized protein LOC10 0.978 0.776 0.807 1e-102
224133212292 predicted protein [Populus trichocarpa] 0.874 0.691 0.837 1e-96
363807524290 uncharacterized protein LOC100780288 [Gl 0.904 0.720 0.790 1e-93
449439449300 PREDICTED: uncharacterized protein LOC10 0.904 0.696 0.809 2e-93
255645461291 unknown [Glycine max] 0.904 0.718 0.785 6e-93
449510955275 PREDICTED: uncharacterized protein LOC10 0.883 0.741 0.824 1e-92
356524674291 PREDICTED: uncharacterized protein LOC10 0.878 0.697 0.799 1e-92
255583469310 conserved hypothetical protein [Ricinus 0.969 0.722 0.784 4e-92
388493884291 unknown [Lotus japonicus] 0.891 0.707 0.772 4e-90
>gi|297734310|emb|CBI15557.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
 Score =  376 bits (966), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 185/229 (80%), Positives = 197/229 (86%), Gaps = 3/229 (1%)

Query: 4   ITTLLCFICDFTLLTLLMFLTRILNWGEDRRFDEMRSNLGKLAIFWIFQAVWVWTVSLPV 63
           + TLL  I    L   L  L RIL WGEDRRFDEMRSNLGKLA+FW FQAVWVWTVSLPV
Sbjct: 65  VLTLLVVIWGLRLGIFL--LMRILQWGEDRRFDEMRSNLGKLAVFWTFQAVWVWTVSLPV 122

Query: 64  TVVNASDRDPSVQAVDVIGWIMWSVGVSIEAIADQQKLSFKNSPENRGKWCNVGFWKYSR 123
           T+VNAS RDPS+QA D+IGWIMWSVG++IEA ADQQKLSFKNSPENRGKWCNVG WKY+R
Sbjct: 123 TIVNASGRDPSLQAADIIGWIMWSVGITIEASADQQKLSFKNSPENRGKWCNVGVWKYTR 182

Query: 124 HPNYFGEIFLWWGIFVASTPVLDGAEWLVILGPIFLTLLLLFISGIPLLEESADKKFGNM 183
           HPNYFGEI LWWGIFVASTPVL+GAEWLVILGPIFLTLLLLF+SGIPLLEESADKKFGN+
Sbjct: 183 HPNYFGEILLWWGIFVASTPVLEGAEWLVILGPIFLTLLLLFVSGIPLLEESADKKFGNV 242

Query: 184 PAYRLYKKTTSPLIPLPPVVYGNLPWWLK-TILFELPLYSRNFPQEGPN 231
             YRLYK TTSPL+PLPPVVYGNLP W K T L E P YSRN PQEG N
Sbjct: 243 AGYRLYKSTTSPLVPLPPVVYGNLPSWFKTTFLLEFPFYSRNLPQEGQN 291




Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359491022|ref|XP_003634205.1| PREDICTED: uncharacterized protein LOC100853969 [Vitis vinifera] Back     alignment and taxonomy information
>gi|224133212|ref|XP_002321511.1| predicted protein [Populus trichocarpa] gi|222868507|gb|EEF05638.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|363807524|ref|NP_001241888.1| uncharacterized protein LOC100780288 [Glycine max] gi|255636515|gb|ACU18596.1| unknown [Glycine max] Back     alignment and taxonomy information
>gi|449439449|ref|XP_004137498.1| PREDICTED: uncharacterized protein LOC101219154 [Cucumis sativus] Back     alignment and taxonomy information
>gi|255645461|gb|ACU23226.1| unknown [Glycine max] Back     alignment and taxonomy information
>gi|449510955|ref|XP_004163821.1| PREDICTED: uncharacterized protein LOC101228363 [Cucumis sativus] Back     alignment and taxonomy information
>gi|356524674|ref|XP_003530953.1| PREDICTED: uncharacterized protein LOC100782499 [Glycine max] Back     alignment and taxonomy information
>gi|255583469|ref|XP_002532493.1| conserved hypothetical protein [Ricinus communis] gi|223527792|gb|EEF29892.1| conserved hypothetical protein [Ricinus communis] Back     alignment and taxonomy information
>gi|388493884|gb|AFK35008.1| unknown [Lotus japonicus] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query231
TAIR|locus:2027774302 AT1G73650 [Arabidopsis thalian 0.887 0.678 0.660 1.4e-71
TAIR|locus:2194090305 AT1G18180 [Arabidopsis thalian 0.883 0.668 0.653 9.9e-71
FB|FBgn0035914316 CG6282 [Drosophila melanogaste 0.917 0.670 0.422 2.8e-43
ZFIN|ZDB-GENE-030131-3630288 si:ch211-210c8.6 "si:ch211-210 0.770 0.618 0.398 3.1e-35
UNIPROTKB|G4N6G0335 MGG_03731 "Uncharacterized pro 0.532 0.367 0.450 7.6e-25
DICTYBASE|DDB_G0279829267 DDB_G0279829 "DUF1295 family p 0.744 0.644 0.353 2.6e-24
UNIPROTKB|Q74AM9256 GSU2323 "Uncharacterized prote 0.714 0.644 0.337 4.3e-22
TIGR_CMR|GSU_2323256 GSU_2323 "membrane protein, pu 0.714 0.644 0.337 4.3e-22
UNIPROTKB|G4NC19328 MGG_00459 "Uncharacterized pro 0.523 0.368 0.369 5.2e-21
UNIPROTKB|Q722V9257 LMOf2365_0620 "Putative membra 0.510 0.459 0.364 5.3e-17
TAIR|locus:2027774 AT1G73650 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 724 (259.9 bits), Expect = 1.4e-71, P = 1.4e-71
 Identities = 136/206 (66%), Positives = 149/206 (72%)

Query:    25 RILNWGEDRRFDEMRSNLGKLAIFWIFQAVWVWTVSLPVTVVNASDRDPSVQAVDVIGWI 84
             RIL WGEDRRFDE R N+ +L IFW  QAVWVWTVSLP+T+VNASD   S++  DVIGW 
Sbjct:    84 RILQWGEDRRFDEQRGNIVRLIIFWTLQAVWVWTVSLPLTLVNASDGGGSLKPADVIGWT 143

Query:    85 MWSVGVSIEAIADQQKLSFKNSPENRGKWCNVGFWKYSRHPNYFGEIFLWWGIFVASTPV 144
             MW  G  IEA ADQQKLSFKNSPENRGKWC+VG WKYSRHPNYFGE+ LWWGIFVA++PV
Sbjct:   144 MWVFGFLIEAAADQQKLSFKNSPENRGKWCDVGVWKYSRHPNYFGEMLLWWGIFVAASPV 203

Query:   145 LDGAEWXXXXXXXXXXXXXXXXXXXXXXEESADKKFGNMPAYRLYKKTTSPLIPLPPVVY 204
             L+GAE+                      E SADKK GN  AYR YKKTTSPLI  P  VY
Sbjct:   204 LEGAEYLVIFGPLFLTLLLLFVSGIPLLEASADKKHGNSGAYRSYKKTTSPLILFPRGVY 263

Query:   205 GNLPWWLKTI-LFELPLYSRNFPQEG 229
             GNLP W KT+ LFE P YSRN PQEG
Sbjct:   264 GNLPGWFKTVFLFEFPFYSRNLPQEG 289




GO:0005737 "cytoplasm" evidence=IEA
GO:0005739 "mitochondrion" evidence=ISM
GO:0006629 "lipid metabolic process" evidence=IEA
GO:0009507 "chloroplast" evidence=ISM
GO:0016021 "integral to membrane" evidence=IEA
GO:0016627 "oxidoreductase activity, acting on the CH-CH group of donors" evidence=IEA
GO:0005886 "plasma membrane" evidence=IDA
GO:0005773 "vacuole" evidence=IDA
GO:0005774 "vacuolar membrane" evidence=IDA
GO:0009506 "plasmodesma" evidence=IDA
GO:0005794 "Golgi apparatus" evidence=IDA
GO:0009627 "systemic acquired resistance" evidence=RCA
GO:0009744 "response to sucrose stimulus" evidence=RCA
GO:0009813 "flavonoid biosynthetic process" evidence=RCA
GO:0010224 "response to UV-B" evidence=RCA
GO:0031347 "regulation of defense response" evidence=RCA
GO:0005783 "endoplasmic reticulum" evidence=IDA
TAIR|locus:2194090 AT1G18180 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
FB|FBgn0035914 CG6282 [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-030131-3630 si:ch211-210c8.6 "si:ch211-210c8.6" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
UNIPROTKB|G4N6G0 MGG_03731 "Uncharacterized protein" [Magnaporthe oryzae 70-15 (taxid:242507)] Back     alignment and assigned GO terms
DICTYBASE|DDB_G0279829 DDB_G0279829 "DUF1295 family protein" [Dictyostelium discoideum (taxid:44689)] Back     alignment and assigned GO terms
UNIPROTKB|Q74AM9 GSU2323 "Uncharacterized protein" [Geobacter sulfurreducens PCA (taxid:243231)] Back     alignment and assigned GO terms
TIGR_CMR|GSU_2323 GSU_2323 "membrane protein, putative" [Geobacter sulfurreducens PCA (taxid:243231)] Back     alignment and assigned GO terms
UNIPROTKB|G4NC19 MGG_00459 "Uncharacterized protein" [Magnaporthe oryzae 70-15 (taxid:242507)] Back     alignment and assigned GO terms
UNIPROTKB|Q722V9 LMOf2365_0620 "Putative membrane protein" [Listeria monocytogenes serotype 4b str. F2365 (taxid:265669)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Fail to connect to STRING server


Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query231
pfam06966235 pfam06966, DUF1295, Protein of unknown function (D 1e-74
COG3752272 COG3752, COG3752, Steroid 5-alpha reductase family 2e-33
>gnl|CDD|219244 pfam06966, DUF1295, Protein of unknown function (DUF1295) Back     alignment and domain information
 Score =  225 bits (575), Expect = 1e-74
 Identities = 91/175 (52%), Positives = 120/175 (68%), Gaps = 6/175 (3%)

Query: 25  RILNWGEDRRFDEMRSNLGK------LAIFWIFQAVWVWTVSLPVTVVNASDRDPSVQAV 78
           R   WGED R+ ++R N GK      L IF+I QAV ++ VSLPV + NAS  +P++ A 
Sbjct: 61  RTWGWGEDYRYVDLRKNWGKWPYLLSLLIFFILQAVLLYIVSLPVYLANASGPNPALGAW 120

Query: 79  DVIGWIMWSVGVSIEAIADQQKLSFKNSPENRGKWCNVGFWKYSRHPNYFGEIFLWWGIF 138
           D+IG  +W VG+  EA+ADQQ  +FK  P N+GK C+ G W+YSRHPNYFGE  +WWGIF
Sbjct: 121 DIIGIAIWLVGIGFEALADQQLWAFKGDPANKGKVCDTGLWRYSRHPNYFGEALIWWGIF 180

Query: 139 VASTPVLDGAEWLVILGPIFLTLLLLFISGIPLLEESADKKFGNMPAYRLYKKTT 193
           + +  VL G EW  I GP+ +TLLL+F+SGIPLLE S  KK+G+   YR Y++ T
Sbjct: 181 LIAINVLSGLEWWTIAGPLLMTLLLVFVSGIPLLEASMLKKYGDREDYRAYQRRT 235


This family contains a number of bacterial and eukaryotic proteins of unknown function that are approximately 300 residues long. Length = 235

>gnl|CDD|226275 COG3752, COG3752, Steroid 5-alpha reductase family enzyme [General function prediction only] Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 231
PF06966235 DUF1295: Protein of unknown function (DUF1295); In 100.0
COG3752272 Steroid 5-alpha reductase family enzyme [General f 100.0
KOG4650311 consensus Predicted steroid reductase [General fun 100.0
PF01222432 ERG4_ERG24: Ergosterol biosynthesis ERG4/ERG24 fam 99.87
COG2020187 STE14 Putative protein-S-isoprenylcysteine methylt 99.86
KOG1435428 consensus Sterol reductase/lamin B receptor [Lipid 99.8
PF04191106 PEMT: Phospholipid methyltransferase ; InterPro: I 99.7
KOG2628201 consensus Farnesyl cysteine-carboxyl methyltransfe 99.66
PF0414094 ICMT: Isoprenylcysteine carboxyl methyltransferase 99.54
KOG1638257 consensus Steroid reductase [Lipid transport and m 99.37
PLN02392260 probable steroid reductase DET2 99.36
PF02544150 Steroid_dh: 3-oxo-5-alpha-steroid 4-dehydrogenase 99.28
COG1755172 Uncharacterized protein conserved in bacteria [Fun 99.19
PLN02560308 enoyl-CoA reductase 99.08
PLN03164323 3-oxo-5-alpha-steroid 4-dehydrogenase, C-terminal 99.0
KOG1640304 consensus Predicted steroid reductase [Lipid trans 97.92
PF07298191 NnrU: NnrU protein; InterPro: IPR009915 This famil 97.65
KOG1639297 consensus Steroid reductase required for elongatio 96.98
PLN02797164 phosphatidyl-N-dimethylethanolamine N-methyltransf 90.28
COG4094219 Predicted membrane protein [Function unknown] 87.9
>PF06966 DUF1295: Protein of unknown function (DUF1295); InterPro: IPR010721 This family contains a number of bacterial and eukaryotic proteins of unknown function that are approximately 300 residues long Back     alignment and domain information
Probab=100.00  E-value=3.4e-51  Score=354.19  Aligned_cols=189  Identities=44%  Similarity=0.950  Sum_probs=173.0

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhcCcccchhhHHHHhhhh------hHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCcHH
Q 026889            5 TTLLCFICDFTLLTLLMFLTRILNWGEDRRFDEMRSNLG------KLAIFWIFQAVWVWTVSLPVTVVNASDRDPSVQAV   78 (231)
Q Consensus         5 ~~~~~~~~~w~~RL~~~l~~R~~~~geD~R~~~~r~~~~------~~~~~~~~q~~~i~~~~lP~~~~~~~~~~~~~~~~   78 (231)
                      .+|++++++||+||+.|++.|..+.|||+||+++|++++      +++.+|++|+++++++++|+++++..+..++++..
T Consensus        41 ~lv~~lv~~W~~RL~~~l~~R~~~~~eD~R~~~~r~~~~~~~~~~~~~~~~~~q~~~~~~~~lP~~~~~~~~~~~~~~~~  120 (235)
T PF06966_consen   41 LLVAALVIVWGLRLGYFLFRRNLGWGEDWRYDDLRKKWGEWFWPFSFFFIFLFQALLVWLISLPVYLANSSPPNPPLNWL  120 (235)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhCCCCCchhHHHHHHhcCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCcchHH
Confidence            578899999999999999999999999999999999864      46678999999999999999988765545678999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCccccccccccccCcchHHHHHHHHHHHHHhccccCchhHHHHHHHHH
Q 026889           79 DVIGWIMWSVGVSIEAIADQQKLSFKNSPENRGKWCNVGFWKYSRHPNYFGEIFLWWGIFVASTPVLDGAEWLVILGPIF  158 (231)
Q Consensus        79 ~~~g~~l~~~G~~le~~Ad~ql~~f~~~~~~~~~li~~Gly~~~RHPnY~geil~w~g~~l~~~~~~~g~~w~~~~~~i~  158 (231)
                      +++|++++++|+.+|++||.||.+||.+++|++++|++|+|++||||||+||+++|+|+++++.+...+..++++++|++
T Consensus       121 ~~~g~~l~~~g~~~E~~AD~Q~~~fk~~~~n~g~~~~~GLw~~sRHPNYfGE~l~W~g~~~~a~~~~~~~~~~~~~~pl~  200 (235)
T PF06966_consen  121 DILGIALFLIGFLLETVADQQKYRFKKDPANKGKFCTTGLWRYSRHPNYFGEILFWWGIYLAAISSGSGWLWWAIIGPLF  200 (235)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhhCcccCCccccCCeeeeeeCchHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999877544444678899999


Q ss_pred             HHHHHHHHhCcHHHHHHHHhHcCCchHHHHHHhhC
Q 026889          159 LTLLLLFISGIPLLEESADKKFGNMPAYRLYKKTT  193 (231)
Q Consensus       159 ~~~ll~~~~~i~~eE~~l~~k~G~~~~Y~~Y~~~t  193 (231)
                      +++++.++++++..|+++.+|||++|+|+||||+|
T Consensus       201 ~~~~l~~~sgip~~E~~~~~kyg~~~~Y~~Y~~~t  235 (235)
T PF06966_consen  201 MTLLLLFVSGIPLLEKRMAKKYGDRPAYQEYQRRT  235 (235)
T ss_pred             HHHHHHHHcCchHHHHHHHHhcCCCHhHHHHHhcC
Confidence            98888889999999999999999999999999997



>COG3752 Steroid 5-alpha reductase family enzyme [General function prediction only] Back     alignment and domain information
>KOG4650 consensus Predicted steroid reductase [General function prediction only] Back     alignment and domain information
>PF01222 ERG4_ERG24: Ergosterol biosynthesis ERG4/ERG24 family; InterPro: IPR001171 The two fungal enzymes, C-14 sterol reductase (gene ERG24 in budding yeast and erg3 in Neurospora crassa) and C-24(28) sterol reductase (gene ERG4 in budding yeast and sts1 in fission yeast), are involved in ergosterol biosynthesis Back     alignment and domain information
>COG2020 STE14 Putative protein-S-isoprenylcysteine methyltransferase [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>KOG1435 consensus Sterol reductase/lamin B receptor [Lipid transport and metabolism; Signal transduction mechanisms] Back     alignment and domain information
>PF04191 PEMT: Phospholipid methyltransferase ; InterPro: IPR007318 The Saccharomyces cerevisiae (Baker's yeast) phospholipid methyltransferase (2 Back     alignment and domain information
>KOG2628 consensus Farnesyl cysteine-carboxyl methyltransferase [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PF04140 ICMT: Isoprenylcysteine carboxyl methyltransferase (ICMT) family ; InterPro: IPR007269 The isoprenylcysteine o-methyltransferase (2 Back     alignment and domain information
>KOG1638 consensus Steroid reductase [Lipid transport and metabolism] Back     alignment and domain information
>PLN02392 probable steroid reductase DET2 Back     alignment and domain information
>PF02544 Steroid_dh: 3-oxo-5-alpha-steroid 4-dehydrogenase ; InterPro: IPR001104 Synonym(s): Steroid 5-alpha-reductase 3-oxo-5-alpha-steroid 4-dehydrogenases, 1 Back     alignment and domain information
>COG1755 Uncharacterized protein conserved in bacteria [Function unknown] Back     alignment and domain information
>PLN02560 enoyl-CoA reductase Back     alignment and domain information
>PLN03164 3-oxo-5-alpha-steroid 4-dehydrogenase, C-terminal domain containing protein; Provisional Back     alignment and domain information
>KOG1640 consensus Predicted steroid reductase [Lipid transport and metabolism] Back     alignment and domain information
>PF07298 NnrU: NnrU protein; InterPro: IPR009915 This family consists of several plant and bacterial NnrU proteins Back     alignment and domain information
>KOG1639 consensus Steroid reductase required for elongation of the very long chain fatty acids [Lipid transport and metabolism] Back     alignment and domain information
>PLN02797 phosphatidyl-N-dimethylethanolamine N-methyltransferase Back     alignment and domain information
>COG4094 Predicted membrane protein [Function unknown] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query231
4a2n_B194 Isoprenylcysteine carboxyl methyltransferase; memb 1e-06
>4a2n_B Isoprenylcysteine carboxyl methyltransferase; membrane protein, RAS and RHO gtpases signallin; HET: SAH PLM CDL; 3.40A {Methanosarcina acetivorans} Length = 194 Back     alignment and structure
 Score = 46.8 bits (111), Expect = 1e-06
 Identities = 33/201 (16%), Positives = 66/201 (32%), Gaps = 13/201 (6%)

Query: 1   MLFITTLLCFICDFTLLTLLMFLTRILNWGEDRRFDEMRSNLGKLAIFWIFQAVWVWTVS 60
           M      +CFI  F +   +  +       +++   ++R N  K  +F  F  +    ++
Sbjct: 1   MNENLWKICFIVMFIIWVFVRKVYGTRAM-KNKSKKKVRPNFEKSLVFLNFIGMVFLPLT 59

Query: 61  LPVTVVNASDRDPSVQAVDVIGWIMWSVGVSIEAIADQQ---KLSFKNSPENRGKWCNVG 117
              +    S       ++ +   I+  + + +     +      S     ++  K    G
Sbjct: 60  AVFSSYLDSFNINLPDSIRLFALIVTFLNIGLFTKIHKDLGNNWSAILEIKDGHKLVKEG 119

Query: 118 FWKYSRHPNYFGEIFLWWGIFVASTPVLDGAEWLVILGPIFLTLLLLFISGIPLLEESAD 177
            +K  RHP Y           +           ++I G +   +L      +P  EE   
Sbjct: 120 IYKNIRHPMYAHLWLWVITQGIIL-----SNWVVLIFGIVAWAILYFIR--VPKEEELLI 172

Query: 178 KKFGNMPAYRLYKKTTSPLIP 198
           ++FG    Y  Y   T  L P
Sbjct: 173 EEFG--DEYIEYMGKTGRLFP 191


Structure Templates Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query231
4a2n_B194 Isoprenylcysteine carboxyl methyltransferase; memb 99.95
>4a2n_B Isoprenylcysteine carboxyl methyltransferase; membrane protein, RAS and RHO gtpases signallin; HET: SAH PLM CDL; 3.40A {Methanosarcina acetivorans} Back     alignment and structure
Probab=99.95  E-value=1.7e-26  Score=193.38  Aligned_cols=116  Identities=19%  Similarity=0.287  Sum_probs=93.3

Q ss_pred             CcHHHHHHHHHHHHHHHHHHHHHHHHHhc-CC--CCCCCCccccccccccccCcchHHHHHHHHHHHHHhccccCchhHH
Q 026889           75 VQAVDVIGWIMWSVGVSIEAIADQQKLSF-KN--SPENRGKWCNVGFWKYSRHPNYFGEIFLWWGIFVASTPVLDGAEWL  151 (231)
Q Consensus        75 ~~~~~~~g~~l~~~G~~le~~Ad~ql~~f-~~--~~~~~~~li~~Gly~~~RHPnY~geil~w~g~~l~~~~~~~g~~w~  151 (231)
                      ..+..++|.+++++|+.++.+|+.|++++ +.  +++++++++++|+|++||||||+|+++.|+|+++...      +++
T Consensus        74 p~~~~~~G~~l~l~G~~l~~~a~~~Lg~~f~~~~~~~~~~~Lvt~G~y~~vRHP~Y~G~~l~~~g~~l~~~------s~~  147 (194)
T 4a2n_B           74 PDSIRLFALIVTFLNIGLFTKIHKDLGNNWSAILEIKDGHKLVKEGIYKNIRHPMYAHLWLWVITQGIILS------NWV  147 (194)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHHHHGGGCCSSCCEETTCCCCCSSTTTTBSSHHHHHHHHHHHHHHHHHT------CHH
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCCCCCCeeeecCcchhccCccHHHHHHHHHHHHHHhc------cHH
Confidence            45688999999999999999999999654 43  3456788999999999999999999999999988752      233


Q ss_pred             HHH-HHHHHHHHHHHHhCcHHHHHHHHhHcCCchHHHHHHhhCCCccccC
Q 026889          152 VIL-GPIFLTLLLLFISGIPLLEESADKKFGNMPAYRLYKKTTSPLIPLP  200 (231)
Q Consensus       152 ~~~-~~i~~~~ll~~~~~i~~eE~~l~~k~G~~~~Y~~Y~~~t~~~iP~~  200 (231)
                      +++ ++++.+++  +..+++.||+.+.++||  ++|++|+++||++||++
T Consensus       148 ~~~~~~~~~~~~--~~~ri~~EE~~L~~~fG--~~Y~~Y~~rv~r~iP~i  193 (194)
T 4a2n_B          148 VLIFGIVAWAIL--YFIRVPKEEELLIEEFG--DEYIEYMGKTGRLFPKV  193 (194)
T ss_dssp             HHHHHHHHHHHH--HHHHHHHHHHHHHHHHT--HHHHHHHHHCBSSSCC-
T ss_pred             HHHHHHHHHHHH--HHHHHHHHHHHHHHHhC--HHHHHHHHhCCeeCcee
Confidence            333 33332222  23468999999999999  99999999999999985




Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

No hit with probability above 80.00