Citrus Sinensis ID: 027043

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------23
MDVKKPASQENLNGDESESQISHLALDIGGSLIKVVYFLRSNGSGGSVDDSGKKSDPVLEGRLHFAKFETSKIIDCLEFIRSKNLHLAGGGAYKFADLIKEKLGVVLDKEDEMDCLVTGANFLLKAVHQEAFTYVDGQKEFVQIDQNDLYPYLLVNIGSGVSMIKVDGDGKFERISGTSVGGGTFWGLGRLLTNCKSFDELLELSHQGNNRVIDMLVGDIYGGSEYSKV
ccccccccccccccccccccccEEEEEccccEEEEEEEEEcccccccccccccccccccccEEEEEEEEcccHHHHHHHHHHccEEEccccHHHHHHHHHHHHcccccEEcHHHHHHHHHHHHHHHcccccEEEEcccEEEEEccccccccEEEEEEcccEEEEEEcccccEEEEccEEEcccHHHHHHHHHcccccHHHHHHHHHccccccccEEEcccccccccccc
ccccccccEcccccccccccccEEEEEccccHEEEEEEEccccccccccccccccccccccEEEEEEcccHHHHHHHHHHHHccEEEccccHHHHHHHHHHHHcccEccHHHHHHHHHHHHHHHHccccEEEEEEccccccccccccccccEEEEEccccEEEEEEEccccEEEEccccccHHHHHHHHHHHcccccHHHHHHHHHccccccHHHHHcccccccccccc
mdvkkpasqenlngdesesQISHLALDIGGSLIKVVYFLRsngsggsvddsgkksdpvlegrLHFAKFETSKIIDCLEFIRSknlhlagggayKFADLIKEKLgvvldkedemdCLVTGANFLLKAVHQEaftyvdgqkefvqidqndlypYLLVNIGsgvsmikvdgdgkferisgtsvgggtfwglgrlltncKSFDELLELSHQGNNRVIDMLVGdiyggseyskv
mdvkkpasqenlngdeSESQISHLALDIGGSLIKVVYFLRSNgsggsvddsgkksdPVLEGRLHFAKFETSKIIDCLEFIRSKNLHLAGGGAYKFADLIKEKLGVVLDKEDEMDCLVTGANFLLKAVHQEAFTYVDGQKEFVQIDQNDLYPYLLVNIGSGVSMIKVDGDGKFERISGTSVGGGTFWGLGRLLTNCKSFDELLELSHQGNNRVIDMLVGDIyggseyskv
MDVKKPASQENLNGDESESQISHLALDIGGSLIKVVYFLRSNgsggsvddsgkksdPVLEGRLHFAKFETSKIIDCLEFIRSKNLHLAGGGAYKFADLIKEKLGVVLDKEDEMDCLVTGANFLLKAVHQEAFTYVDGQKEFVQIDQNDLYPYLLVNIGSGVSMIKVDGDGKFERISGTSVGGGTFWGLGRLLTNCKSFDELLELSHQGNNRVIDMLVGDIYGGSEYSKV
**********************HLALDIGGSLIKVVYFLR******************LEGRLHFAKFETSKIIDCLEFIRSKNLHLAGGGAYKFADLIKEKLGVVLDKEDEMDCLVTGANFLLKAVHQEAFTYVDGQKEFVQIDQNDLYPYLLVNIGSGVSMIKVDGDGKFERISGTSVGGGTFWGLGRLLTNCKSFDELLELSHQGNNRVIDMLVGDIYG*******
*******************QISHLALDIGGSLIKVVYFLRSNGS***********DPVLEGRLHFAKFETSKIIDCLEFIRSKNLHLAGGGAYKFADLIKEKLGVVLDKEDEMDCLVTGANFLLKAVHQEAFTYVDGQKEFVQIDQNDLYPYLLVNIGSGVSMIKVDGDGKFERISGTSVGGGTFWGLGRLLTNCKSFDELLELSHQGNNRVIDMLVGDIYGGSEYS**
******************SQISHLALDIGGSLIKVVYFLRSNG************DPVLEGRLHFAKFETSKIIDCLEFIRSKNLHLAGGGAYKFADLIKEKLGVVLDKEDEMDCLVTGANFLLKAVHQEAFTYVDGQKEFVQIDQNDLYPYLLVNIGSGVSMIKVDGDGKFERISGTSVGGGTFWGLGRLLTNCKSFDELLELSHQGNNRVIDMLVGDIYGGSEYSKV
*****PASQENLNGDESESQISHLALDIGGSLIKVVYFLRSN***********KSDPVLEGRLHFAKFETSKIIDCLEFIRSKNLHLAGGGAYKFADLIKEKLGVVLDKEDEMDCLVTGANFLLKAVHQEAFTYVDGQKEFVQIDQNDLYPYLLVNIGSGVSMIKVDGDGKFERISGTSVGGGTFWGLGRLLTNCKSFDELLELSHQGNNRVIDMLVGDIYGGSEY***
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
MDVKKPASQENLNGDESESQISHLALDIGGSLIKVVYFLRSNGSGGSVDDSGKKSDPVLEGRLHFAKFETSKIIDCLEFIRSKNLHLAGGGAYKFADLIKEKLGVVLDKEDEMDCLVTGANFLLKAVHQEAFTYVDGQKEFVQIDQNDLYPYLLVNIGSGVSMIKVDGDGKFERISGTSVGGGTFWGLGRLLTNCKSFDELLELSHQGNNRVIDMLVGDIYGGSEYSKV
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query229 2.2.26 [Sep-21-2011]
Q8L5Y9 901 Pantothenate kinase 2 OS= no no 0.912 0.231 0.623 3e-80
O80765 383 Pantothenate kinase 1 OS= no no 0.903 0.540 0.676 2e-72
Q9NVE7 773 Pantothenate kinase 4 OS= yes no 0.868 0.257 0.471 3e-49
Q4R4U1 773 Pantothenate kinase 4 OS= N/A no 0.890 0.263 0.473 3e-49
Q5R5F8 773 Pantothenate kinase 4 OS= yes no 0.890 0.263 0.469 6e-48
Q923S8 773 Pantothenate kinase 4 OS= yes no 0.873 0.258 0.478 5e-45
Q80YV4 820 Pantothenate kinase 4 OS= yes no 0.882 0.246 0.482 1e-44
O74962 403 Pantothenate kinase OS=Sc yes no 0.890 0.506 0.448 2e-34
Q8R2W9 370 Pantothenate kinase 3 OS= no no 0.912 0.564 0.349 4e-28
Q9H999 370 Pantothenate kinase 3 OS= no no 0.912 0.564 0.349 6e-28
>sp|Q8L5Y9|PANK2_ARATH Pantothenate kinase 2 OS=Arabidopsis thaliana GN=At4g32180 PE=1 SV=2 Back     alignment and function desciption
 Score =  298 bits (762), Expect = 3e-80,   Method: Compositional matrix adjust.
 Identities = 151/242 (62%), Positives = 178/242 (73%), Gaps = 33/242 (13%)

Query: 21  ISHLALDIGGSLIKVVYFLRSNGSGGSVDDSGK-------------KSDPVLEGRLHFAK 67
           ISHLALDIGGSLIK++YF R        D   +             +S PVL GRLHF K
Sbjct: 77  ISHLALDIGGSLIKLLYFSRHEDYSNDDDKRKRTIKERLGITNGNLRSYPVLGGRLHFVK 136

Query: 68  FETSKIIDCLEFIRSKNLH--------------------LAGGGAYKFADLIKEKLGVVL 107
           FET KI +CL+FI SK LH                    + GGGA+KFADL KE+LGV +
Sbjct: 137 FETHKINECLDFIHSKQLHRRDPYPWSSKTLPLGTGVIKVTGGGAFKFADLFKERLGVSI 196

Query: 108 DKEDEMDCLVTGANFLLKAVHQEAFTYVDGQKEFVQIDQNDLYPYLLVNIGSGVSMIKVD 167
           +KEDEM CLV+GANFLLKA+  EAFT+++G+KEFVQID NDLYPYLLVN+GSGVS+IKVD
Sbjct: 197 EKEDEMHCLVSGANFLLKAIRHEAFTHMEGEKEFVQIDPNDLYPYLLVNVGSGVSIIKVD 256

Query: 168 GDGKFERISGTSVGGGTFWGLGRLLTNCKSFDELLELSHQGNNRVIDMLVGDIYGGSEYS 227
           G+GKFER+SGT+VGGGT+WGLGRLLT CKSFDELLELS +G+N  IDMLVGDIYGG +YS
Sbjct: 257 GEGKFERVSGTNVGGGTYWGLGRLLTKCKSFDELLELSQKGDNSAIDMLVGDIYGGMDYS 316

Query: 228 KV 229
           K+
Sbjct: 317 KI 318
Plays a role in the physiological regulation of the intracellular CoA concentration.
Arabidopsis thaliana (taxid: 3702)
EC: 2EC: .EC: 7EC: .EC: 1EC: .EC: 3EC: 3
>sp|O80765|PANK1_ARATH Pantothenate kinase 1 OS=Arabidopsis thaliana GN=COAA PE=2 SV=2 Back     alignment and function description
>sp|Q9NVE7|PANK4_HUMAN Pantothenate kinase 4 OS=Homo sapiens GN=PANK4 PE=1 SV=1 Back     alignment and function description
>sp|Q4R4U1|PANK4_MACFA Pantothenate kinase 4 OS=Macaca fascicularis GN=PANK4 PE=2 SV=2 Back     alignment and function description
>sp|Q5R5F8|PANK4_PONAB Pantothenate kinase 4 OS=Pongo abelii GN=PANK4 PE=2 SV=1 Back     alignment and function description
>sp|Q923S8|PANK4_RAT Pantothenate kinase 4 OS=Rattus norvegicus GN=Pank4 PE=1 SV=1 Back     alignment and function description
>sp|Q80YV4|PANK4_MOUSE Pantothenate kinase 4 OS=Mus musculus GN=Pank4 PE=1 SV=2 Back     alignment and function description
>sp|O74962|PANK_SCHPO Pantothenate kinase OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC4B4.01c PE=1 SV=1 Back     alignment and function description
>sp|Q8R2W9|PANK3_MOUSE Pantothenate kinase 3 OS=Mus musculus GN=Pank3 PE=2 SV=1 Back     alignment and function description
>sp|Q9H999|PANK3_HUMAN Pantothenate kinase 3 OS=Homo sapiens GN=PANK3 PE=1 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query229
255568790 414 Pantothenate kinase, putative [Ricinus c 0.995 0.550 0.671 1e-89
297739056 419 unnamed protein product [Vitis vinifera] 0.903 0.494 0.714 6e-88
359473229 426 PREDICTED: LOW QUALITY PROTEIN: pantothe 0.903 0.485 0.690 1e-87
224107821 398 predicted protein [Populus trichocarpa] 0.943 0.542 0.690 6e-84
224135815 872 predicted protein [Populus trichocarpa] 0.912 0.239 0.654 4e-83
449434931 397 PREDICTED: pantothenate kinase 2-like [C 0.934 0.539 0.679 5e-83
255540653 907 Pantothenate kinase, putative [Ricinus c 0.903 0.228 0.665 9e-83
357461955 893 Pantothenate kinase [Medicago truncatula 0.903 0.231 0.669 1e-82
307135985303 pantotenate kinase family protein [Cucum 0.934 0.706 0.675 3e-82
224121702 939 predicted protein [Populus trichocarpa] 0.912 0.222 0.639 7e-82
>gi|255568790|ref|XP_002525366.1| Pantothenate kinase, putative [Ricinus communis] gi|223535329|gb|EEF37004.1| Pantothenate kinase, putative [Ricinus communis] Back     alignment and taxonomy information
 Score =  334 bits (857), Expect = 1e-89,   Method: Compositional matrix adjust.
 Identities = 174/259 (67%), Positives = 189/259 (72%), Gaps = 31/259 (11%)

Query: 1   MDVKKPASQENLNGDESESQISHLALDIGGSLIKVVYFLRSNGSGGSVDDSGKKSDP--- 57
           MD+K      N    +S  QISHLALDIGGSLIKVVY  R + +   ++     SD    
Sbjct: 1   MDLKDIRLDPNSESTQSIGQISHLALDIGGSLIKVVYLSRYSNNSADIEGESSSSDDDTL 60

Query: 58  ----------VLEGRLHFAKFETSKIIDCLEFIRSKNLHL------------------AG 89
                     +LEGRLHFAKFETSKI DCLEFI SK LHL                   G
Sbjct: 61  VLSNVNGEHHILEGRLHFAKFETSKINDCLEFISSKKLHLGGFQRHENPTKDRNFIKATG 120

Query: 90  GGAYKFADLIKEKLGVVLDKEDEMDCLVTGANFLLKAVHQEAFTYVDGQKEFVQIDQNDL 149
           GGAYKF D  KEKLG  LDKEDEMDCLV GANFLLKAVH EA+TY+DGQKEFVQID NDL
Sbjct: 121 GGAYKFTDFFKEKLGFSLDKEDEMDCLVAGANFLLKAVHHEAYTYMDGQKEFVQIDHNDL 180

Query: 150 YPYLLVNIGSGVSMIKVDGDGKFERISGTSVGGGTFWGLGRLLTNCKSFDELLELSHQGN 209
           YPYLLVNIGSGVSMI+V+GDGKFER+SGTSVGGGTFWGLG+LLT CK FDELLELSHQGN
Sbjct: 181 YPYLLVNIGSGVSMIRVEGDGKFERVSGTSVGGGTFWGLGKLLTKCKCFDELLELSHQGN 240

Query: 210 NRVIDMLVGDIYGGSEYSK 228
           NRVIDMLVGDIYGG++YSK
Sbjct: 241 NRVIDMLVGDIYGGTDYSK 259

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|297739056|emb|CBI28545.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|359473229|ref|XP_002267027.2| PREDICTED: LOW QUALITY PROTEIN: pantothenate kinase 2 [Vitis vinifera] Back     alignment and taxonomy information
>gi|224107821|ref|XP_002314614.1| predicted protein [Populus trichocarpa] gi|222863654|gb|EEF00785.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|224135815|ref|XP_002322167.1| predicted protein [Populus trichocarpa] gi|222869163|gb|EEF06294.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|449434931|ref|XP_004135249.1| PREDICTED: pantothenate kinase 2-like [Cucumis sativus] gi|449521096|ref|XP_004167567.1| PREDICTED: pantothenate kinase 2-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|255540653|ref|XP_002511391.1| Pantothenate kinase, putative [Ricinus communis] gi|223550506|gb|EEF51993.1| Pantothenate kinase, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|357461955|ref|XP_003601259.1| Pantothenate kinase [Medicago truncatula] gi|355490307|gb|AES71510.1| Pantothenate kinase [Medicago truncatula] Back     alignment and taxonomy information
>gi|307135985|gb|ADN33844.1| pantotenate kinase family protein [Cucumis melo subsp. melo] Back     alignment and taxonomy information
>gi|224121702|ref|XP_002318651.1| predicted protein [Populus trichocarpa] gi|222859324|gb|EEE96871.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query229
TAIR|locus:2195638 383 PANK1 "pantothenate kinase 1" 0.615 0.368 0.822 9.6e-76
TAIR|locus:2116490 901 PANK2 "pantothenate kinase 2" 0.633 0.160 0.758 1.1e-73
UNIPROTKB|F1MLD0 773 PANK4 "Uncharacterized protein 0.711 0.210 0.546 3.7e-48
UNIPROTKB|I3LPY8 780 PANK4 "Uncharacterized protein 0.711 0.208 0.540 4.3e-48
UNIPROTKB|E2QXZ0 773 PANK4 "Uncharacterized protein 0.711 0.210 0.540 5e-48
DICTYBASE|DDB_G0290401 685 DDB_G0290401 "pantothenate kin 0.912 0.305 0.456 6e-48
ASPGD|ASPL0000076011 420 panK [Emericella nidulans (tax 0.851 0.464 0.466 9.1e-45
ZFIN|ZDB-GENE-040426-1592 774 pank4 "pantothenate kinase 4" 0.724 0.214 0.542 1.3e-44
UNIPROTKB|E1BV98 771 PANK4 "Uncharacterized protein 0.724 0.215 0.531 7.7e-44
RGD|628857 773 Pank4 "pantothenate kinase 4" 0.724 0.214 0.537 2.8e-43
TAIR|locus:2195638 PANK1 "pantothenate kinase 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 616 (221.9 bits), Expect = 9.6e-76, Sum P(2) = 9.6e-76
 Identities = 116/141 (82%), Positives = 129/141 (91%)

Query:    89 GGGAYKFADLIKEKLGVVLDKEDEMDCLVTGANFLLKAVHQEAFTYVDGQKEFVQIDQND 148
             GGGA+KFADL KEKLG++ DKEDEM  LV G NFLLK V +EAFTY+DGQK+FV+ID ND
Sbjct:    88 GGGAFKFADLFKEKLGILFDKEDEMCSLVGGVNFLLKTVPREAFTYLDGQKKFVEIDHND 147

Query:   149 LYPYLLVNIGSGVSMIKVDGDGKFERISGTSVGGGTFWGLGRLLTNCKSFDELLELSHQG 208
             LYPYLLVNIGSGVSMIKVDGDGK+ERISGTS+GGGTF GLG+LLT CKSFDELLELSH G
Sbjct:   148 LYPYLLVNIGSGVSMIKVDGDGKYERISGTSLGGGTFLGLGKLLTKCKSFDELLELSHHG 207

Query:   209 NNRVIDMLVGDIYGGSEYSKV 229
             NNRVIDMLVGDIYGG++YSK+
Sbjct:   208 NNRVIDMLVGDIYGGTDYSKI 228
GO:0004594 "pantothenate kinase activity" evidence=IEA;ISS;IDA
GO:0005524 "ATP binding" evidence=IEA
GO:0005737 "cytoplasm" evidence=ISM
GO:0006085 "acetyl-CoA biosynthetic process" evidence=ISS
GO:0015937 "coenzyme A biosynthetic process" evidence=IEA;IDA
TAIR|locus:2116490 PANK2 "pantothenate kinase 2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
UNIPROTKB|F1MLD0 PANK4 "Uncharacterized protein" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
UNIPROTKB|I3LPY8 PANK4 "Uncharacterized protein" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms
UNIPROTKB|E2QXZ0 PANK4 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
DICTYBASE|DDB_G0290401 DDB_G0290401 "pantothenate kinase" [Dictyostelium discoideum (taxid:44689)] Back     alignment and assigned GO terms
ASPGD|ASPL0000076011 panK [Emericella nidulans (taxid:162425)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-040426-1592 pank4 "pantothenate kinase 4" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
UNIPROTKB|E1BV98 PANK4 "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
RGD|628857 Pank4 "pantothenate kinase 4" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer2.7.1.330.824
3rd Layer2.7.10.766

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query229
PLN02920 398 PLN02920, PLN02920, pantothenate kinase 1 1e-130
PLN02902 876 PLN02902, PLN02902, pantothenate kinase 1e-111
pfam03630 329 pfam03630, Fumble, Fumble 1e-92
TIGR00555296 TIGR00555, panK_eukar, pantothenate kinase, eukary 5e-75
COG5146 342 COG5146, PanK, Pantothenate kinase, acetyl-CoA reg 5e-50
PTZ00297 1452 PTZ00297, PTZ00297, pantothenate kinase; Provision 1e-33
PRK13317 277 PRK13317, PRK13317, pantothenate kinase; Provision 2e-25
>gnl|CDD|215498 PLN02920, PLN02920, pantothenate kinase 1 Back     alignment and domain information 
 Score =  371 bits (955), Expect = e-130
 Identities = 176/239 (73%), Positives = 186/239 (77%), Gaps = 22/239 (9%)

Query: 11  NLNGDESESQISHLALDIGGSLIKVVYFLRSNGSGGSVDDSGKKS--DPVLEGRLHFAKF 68
             +G+ S  QISHLALDIGGSLIK+VYF  S  SG S D     S     + GRLHFAKF
Sbjct: 8   EGDGNSSPIQISHLALDIGGSLIKLVYF--SRNSGDSEDPRNDSSVKSDGVNGRLHFAKF 65

Query: 69  ETSKIIDCLEFIRSKNLHLAG------------------GGAYKFADLIKEKLGVVLDKE 110
           ET KI DCLEFI S  LH  G                  GGAYKFADL KEKLG+ LDKE
Sbjct: 66  ETRKINDCLEFISSNKLHHGGFQHHENPTHDKNFIKATGGGAYKFADLFKEKLGISLDKE 125

Query: 111 DEMDCLVTGANFLLKAVHQEAFTYVDGQKEFVQIDQNDLYPYLLVNIGSGVSMIKVDGDG 170
           DEMDCLVTGANFLLKAVH EAFTY+DGQKEFVQID NDLYPYLLVNIGSGVSMIKVDGDG
Sbjct: 126 DEMDCLVTGANFLLKAVHHEAFTYLDGQKEFVQIDHNDLYPYLLVNIGSGVSMIKVDGDG 185

Query: 171 KFERISGTSVGGGTFWGLGRLLTNCKSFDELLELSHQGNNRVIDMLVGDIYGGSEYSKV 229
           KFER+SGTSVGGGTFWGLG+LLT CKSFDELLELSHQGNNRVIDMLVGDIYGG +YSK+
Sbjct: 186 KFERVSGTSVGGGTFWGLGKLLTKCKSFDELLELSHQGNNRVIDMLVGDIYGGMDYSKI 244

Length = 398
>gnl|CDD|215489 PLN02902, PLN02902, pantothenate kinase Back     alignment and domain information
>gnl|CDD|217646 pfam03630, Fumble, Fumble Back     alignment and domain information
>gnl|CDD|233021 TIGR00555, panK_eukar, pantothenate kinase, eukaryotic/staphyloccocal type Back     alignment and domain information
>gnl|CDD|227475 COG5146, PanK, Pantothenate kinase, acetyl-CoA regulated [Coenzyme metabolism] Back     alignment and domain information
>gnl|CDD|140318 PTZ00297, PTZ00297, pantothenate kinase; Provisional Back     alignment and domain information
>gnl|CDD|237346 PRK13317, PRK13317, pantothenate kinase; Provisional Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 229
KOG2201 371 consensus Pantothenate kinase PanK and related pro 100.0
PLN02920 398 pantothenate kinase 1 100.0
PF03630 341 Fumble: Fumble ; InterPro: IPR004567 Pantothenate 100.0
PLN02902 876 pantothenate kinase 100.0
PTZ00297 1452 pantothenate kinase; Provisional 100.0
COG5146 342 PanK Pantothenate kinase, acetyl-CoA regulated [Co 100.0
TIGR00555 279 panK_eukar pantothenate kinase, eukaryotic/staphyl 100.0
PRK13317 277 pantothenate kinase; Provisional 100.0
TIGR03286404 methan_mark_15 putative methanogenesis marker prot 98.97
TIGR00241248 CoA_E_activ CoA-substrate-specific enzyme activase 97.5
TIGR03192293 benz_CoA_bzdQ benzoyl-CoA reductase, bzd-type, Q s 97.11
PRK14101 638 bifunctional glucokinase/RpiR family transcription 96.46
TIGR02261262 benz_CoA_red_D benzoyl-CoA reductase, bcr type, su 95.88
PRK13318258 pantothenate kinase; Reviewed 95.69
PF01869271 BcrAD_BadFG: BadF/BadG/BcrA/BcrD ATPase family; In 95.2
PRK12408 336 glucokinase; Provisional 95.17
PRK00292 316 glk glucokinase; Provisional 95.11
COG1924396 Activator of 2-hydroxyglutaryl-CoA dehydratase (HS 94.9
COG1940 314 NagC Transcriptional regulator/sugar kinase [Trans 94.85
TIGR00744 318 ROK_glcA_fam ROK family protein (putative glucokin 94.83
PF02685 316 Glucokinase: Glucokinase; InterPro: IPR003836 Gluc 94.8
PRK13321256 pantothenate kinase; Reviewed 94.08
smart0073299 YqgFc Likely ribonuclease with RNase H fold. YqgF 93.89
PRK09557301 fructokinase; Reviewed 92.36
PRK13320244 pantothenate kinase; Reviewed 92.26
PF05378176 Hydant_A_N: Hydantoinase/oxoprolinase N-terminal r 92.14
TIGR01175348 pilM type IV pilus assembly protein PilM. This pro 91.79
PF00480179 ROK: ROK family; InterPro: IPR000600 A family of b 91.44
PRK10719 475 eutA reactivating factor for ethanolamine ammonia 90.95
PRK13310 303 N-acetyl-D-glucosamine kinase; Provisional 90.29
TIGR00671243 baf pantothenate kinase, type III. This model desc 89.71
PRK13311256 N-acetyl-D-glucosamine kinase; Provisional 88.9
PRK13331251 pantothenate kinase; Reviewed 87.94
PRK09698302 D-allose kinase; Provisional 87.65
PF06723326 MreB_Mbl: MreB/Mbl protein; InterPro: IPR004753 Ba 87.49
PRK13326262 pantothenate kinase; Reviewed 83.72
PRK05082291 N-acetylmannosamine kinase; Provisional 83.57
PRK13324258 pantothenate kinase; Reviewed 80.05
>KOG2201 consensus Pantothenate kinase PanK and related proteins [Coenzyme transport and metabolism] Back     alignment and domain information 
Probab=100.00  E-value=4.4e-74  Score=522.40  Aligned_cols=213  Identities=56%  Similarity=0.947  Sum_probs=188.5

Q ss_pred             CCCCCCCCeEEEEeCCceeEEEEEeecCCCCCccc-----CCCCCCCCCcCCceEEeEecccCHHHHHHHHHhc------
Q 027043           15 DESESQISHLALDIGGSLIKVVYFLRSNGSGGSVD-----DSGKKSDPVLEGRLHFAKFETSKIIDCLEFIRSK------   83 (229)
Q Consensus        15 ~~~~~~~~~igiDIGGSL~Kivy~~~~~~~~~~~~-----~~~~~~~~~~~g~l~F~~f~t~~i~~~i~~i~~~------   83 (229)
                      ++ .+.++|+|+||||||+|+|||++.+....++.     ....+..+...++|+|++|++.+|+.|++|++..      
T Consensus        17 ~~-~~~~~~~~~DigGtl~KlvY~s~~~~~~~~~~~~~~~n~~~~~~~~~~~rl~~~~~e~~~~~~~L~Fi~~~~~~~~~   95 (371)
T KOG2201|consen   17 NN-KPMISHFAMDIGGTLVKLVYFSPVDISPEEEESEVILNGAYGKTGYRDGRLHFINFETFKIDGCLNFIRFNITDHPV   95 (371)
T ss_pred             cc-cccCceEEEecCCcEEEEEEEecCCCCcchhhhhcccccccccccccccEEEEEEeeecCccchhHHhhcchhhccc
Confidence            45 78899999999999999999999876332111     1222334678899999999999999999999852      


Q ss_pred             --------CceecCCchhhchHHHHHHhCCccceechhhhhhhhHHHHHhhCCCccEEeeCCCeeeee----cCCCCCcc
Q 027043           84 --------NLHLAGGGAYKFADLIKEKLGVVLDKEDEMDCLVTGANFLLKAVHQEAFTYVDGQKEFVQ----IDQNDLYP  151 (229)
Q Consensus        84 --------~i~~TGGGA~k~~~~~~~~lg~~~~k~dEm~~li~G~~fLl~~~~~e~f~~~~~~~~~~~----~~~~~~yP  151 (229)
                              .+++||||||||+++|++++++++.|+|||+|||+|++|+++++|+|||||.+...+.+.    .+.+++||
T Consensus        96 k~~~~~~~~i~aTGGGA~Kf~d~~~~~l~v~l~k~Dem~~LI~G~~f~l~~i~~E~fty~~~~~~~~~~~~~~~~d~~yP  175 (371)
T KOG2201|consen   96 KNFSKLTTVICATGGGAYKFEDLFREILDVKLDKEDEMDCLIKGLNFLLSNIPAECFTYENDEDEEVEFQTNFCLDSPYP  175 (371)
T ss_pred             cccccceeEEEEeCCcceeHHHHHHHHhCceEeehhHHHHHHhhhHHHHhcCccceEEEecCCCcceecccCCccCCCCc
Confidence                    246699999999999999999999999999999999999999999999999988654331    22356999


Q ss_pred             EEEEecCCceEEEEEeCCCceEEeeccccCchhHHhhhhhhcCCCCHHHHHHHhhCCCCCcCceEeeeecCCCCCcCC
Q 027043          152 YLLVNIGSGVSMIKVDGDGKFERISGTSVGGGTFWGLGRLLTNCKSFDELLELSHQGNNRVIDMLVGDIYGGSEYSKV  229 (229)
Q Consensus       152 yLlVNIGSGvSi~kV~~~~~~~RVgGssiGGGT~~GL~~LLtg~~~fdeil~lA~~Gd~~~vDmlV~DIYGg~dY~~i  229 (229)
                      ||||||||||||+||++|++|+||||||+||||||||++|||||++|||+|+||++|||++|||||+||||| +|+++
T Consensus       176 yLLVNIGSGVSIlkV~~~~~feRvgGsSlGGGTf~GL~~LLTg~~sfdE~LelA~~Gd~~~vD~LV~DIYGg-~y~~f  252 (371)
T KOG2201|consen  176 YLLVNIGSGVSILKVDGPDNFERVGGSSLGGGTFLGLGSLLTGCKSFDELLELASRGDNRNVDMLVRDIYGG-DYSRF  252 (371)
T ss_pred             eEEEEcCCCeEEEEEecCCceeEecccccCCcchhhhHhHhcCCCCHHHHHHHHhcCCCchhhhhhhhccCc-cHhhc
Confidence            999999999999999999999999999999999999999999999999999999999999999999999998 89975

>PLN02920 pantothenate kinase 1 Back     alignment and domain information
>PF03630 Fumble: Fumble ; InterPro: IPR004567 Pantothenate kinase (PanK or CoaA) catalyses the first step of the universal five step coenzyme A (CoA) biosynthesis pathway Back     alignment and domain information
>PLN02902 pantothenate kinase Back     alignment and domain information
>PTZ00297 pantothenate kinase; Provisional Back     alignment and domain information
>COG5146 PanK Pantothenate kinase, acetyl-CoA regulated [Coenzyme metabolism] Back     alignment and domain information
>TIGR00555 panK_eukar pantothenate kinase, eukaryotic/staphyloccocal type Back     alignment and domain information
>PRK13317 pantothenate kinase; Provisional Back     alignment and domain information
>TIGR03286 methan_mark_15 putative methanogenesis marker protein 15 Back     alignment and domain information
>TIGR00241 CoA_E_activ CoA-substrate-specific enzyme activase, putative Back     alignment and domain information
>TIGR03192 benz_CoA_bzdQ benzoyl-CoA reductase, bzd-type, Q subunit Back     alignment and domain information
>PRK14101 bifunctional glucokinase/RpiR family transcriptional regulator; Provisional Back     alignment and domain information
>TIGR02261 benz_CoA_red_D benzoyl-CoA reductase, bcr type, subunit D Back     alignment and domain information
>PRK13318 pantothenate kinase; Reviewed Back     alignment and domain information
>PF01869 BcrAD_BadFG: BadF/BadG/BcrA/BcrD ATPase family; InterPro: IPR002731 This domain is found in the BadF (O07462 from SWISSPROT) and BadG (O07463 from SWISSPROT) proteins that are two subunits of Benzoyl-CoA reductase, that may be involved in ATP hydrolysis Back     alignment and domain information
>PRK12408 glucokinase; Provisional Back     alignment and domain information
>PRK00292 glk glucokinase; Provisional Back     alignment and domain information
>COG1924 Activator of 2-hydroxyglutaryl-CoA dehydratase (HSP70-class ATPase domain) [Lipid metabolism] Back     alignment and domain information
>COG1940 NagC Transcriptional regulator/sugar kinase [Transcription / Carbohydrate transport and metabolism] Back     alignment and domain information
>TIGR00744 ROK_glcA_fam ROK family protein (putative glucokinase) Back     alignment and domain information
>PF02685 Glucokinase: Glucokinase; InterPro: IPR003836 Glucokinases 2 Back     alignment and domain information
>PRK13321 pantothenate kinase; Reviewed Back     alignment and domain information
>smart00732 YqgFc Likely ribonuclease with RNase H fold Back     alignment and domain information
>PRK09557 fructokinase; Reviewed Back     alignment and domain information
>PRK13320 pantothenate kinase; Reviewed Back     alignment and domain information
>PF05378 Hydant_A_N: Hydantoinase/oxoprolinase N-terminal region; InterPro: IPR008040 This domain is found at the N terminus of the hydantoinase/oxoprolinase IPR002821 from INTERPRO family Back     alignment and domain information
>TIGR01175 pilM type IV pilus assembly protein PilM Back     alignment and domain information
>PF00480 ROK: ROK family; InterPro: IPR000600 A family of bacterial proteins has been described which groups transcriptional repressors, sugar kinases and yet uncharacterised open reading frames [] Back     alignment and domain information
>PRK10719 eutA reactivating factor for ethanolamine ammonia lyase; Provisional Back     alignment and domain information
>PRK13310 N-acetyl-D-glucosamine kinase; Provisional Back     alignment and domain information
>TIGR00671 baf pantothenate kinase, type III Back     alignment and domain information
>PRK13311 N-acetyl-D-glucosamine kinase; Provisional Back     alignment and domain information
>PRK13331 pantothenate kinase; Reviewed Back     alignment and domain information
>PRK09698 D-allose kinase; Provisional Back     alignment and domain information
>PF06723 MreB_Mbl: MreB/Mbl protein; InterPro: IPR004753 Bacterial cell shape varies greatly between species, and characteristic morphologies are used for identification purposes Back     alignment and domain information
>PRK13326 pantothenate kinase; Reviewed Back     alignment and domain information
>PRK05082 N-acetylmannosamine kinase; Provisional Back     alignment and domain information
>PRK13324 pantothenate kinase; Reviewed Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query229
2i7p_A 362 Crystal Structure Of Human Pank3 In Complex With Ac 7e-27
3mk6_A 376 Substrate And Inhibitor Binding To Pank Length = 37 7e-27
3sms_A 382 Human Pantothenate Kinase 3 In Complex With A Panto 8e-27
3smp_A 386 Monoclinic Crystal Structure Of Human Pantothenate 7e-24
2i7n_A 360 Crystal Structure Of Human Pank1 Alpha: The Catalyt 2e-23
>pdb|2I7P|A Chain A, Crystal Structure Of Human Pank3 In Complex With Accoa Length = 362 Back     alignment and structure 
Iteration: 1

 Score =  117 bits (292), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 69/178 (38%), Positives = 101/178 (56%), Gaps = 14/178 (7%)
Query: 60  EGRLHFAKFETSKIIDCLEFIRSKN-------LHLAGGGAYKFADLIKEKLGVVLDKEDE 112
            G LHF +F T  +   ++  R KN       L   GGGAYKF    +    + L K DE
Sbjct: 73  RGNLHFIRFPTQDLPTFIQMGRDKNFSTLQTVLCATGGGAYKFEKDFRTIGNLHLHKLDE 132
Query: 113 MDCLVTGANFLLKAV---HQEAFTYVDGQK----EFVQIDQNDLYPYLLVNIGSGVSMIK 165
           +DCLV G  ++         E + + +  +    + +  + +D YP L+VNIGSGVS++ 
Sbjct: 133 LDCLVKGLLYIDSVSFNGQAECYYFANASEPERCQKMPFNLDDPYPLLVVNIGSGVSILA 192
Query: 166 VDGDGKFERISGTSVGGGTFWGLGRLLTNCKSFDELLELSHQGNNRVIDMLVGDIYGG 223
           V     ++R++GTS+GGGTF GL  LLT C+SF+E LE++ +G++   D LV DIYGG
Sbjct: 193 VHSKDNYKRVTGTSLGGGTFLGLCSLLTGCESFEEALEMASKGDSTQADKLVRDIYGG 250
>pdb|3MK6|A Chain A, Substrate And Inhibitor Binding To Pank Length = 376 Back     alignment and structure
>pdb|3SMS|A Chain A, Human Pantothenate Kinase 3 In Complex With A Pantothenate Analog Length = 382 Back     alignment and structure
>pdb|3SMP|A Chain A, Monoclinic Crystal Structure Of Human Pantothenate Kinase 1 Alpha Length = 386 Back     alignment and structure
>pdb|2I7N|A Chain A, Crystal Structure Of Human Pank1 Alpha: The Catalytic Core Domain In Complex With Accoa Length = 360 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query229
2i7n_A 360 Pantothenate kinase 1; PANK, transferase; HET: ACO 4e-65
2ews_A287 Pantothenate kinase; PANK, structural genomics, st 1e-39
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 4e-05
>2i7n_A Pantothenate kinase 1; PANK, transferase; HET: ACO; 1.90A {Homo sapiens} SCOP: c.55.1.14 c.55.1.14 PDB: 3smp_A* 3sms_A* 2i7p_A* 3mk6_A* Length = 360 Back     alignment and structure
 Score =  204 bits (520), Expect = 4e-65
 Identities = 71/247 (28%), Positives = 117/247 (47%), Gaps = 43/247 (17%)

Query: 21  ISHLALDIGGSLIKVVYFLRSNGSGGSVDDSGKKSDPV---------------------- 58
                +DIGG+L+K+VYF   + +     +  +    +                      
Sbjct: 3   FPWFGMDIGGTLVKLVYFEPKDITAEEEQEEVENLKSIRKYLTSNTAYGKTGIRDVHLEL 62

Query: 59  -------LEGRLHFAKFETSKIIDCLEFIRSKNLH-------LAGGGAYKFADLIKEKLG 104
                   +G LHF +F +  +   ++    KN           GGGA+KF +  +    
Sbjct: 63  KNLTMCGRKGNLHFIRFPSCAMHRFIQMGSEKNFSSLHTTLCATGGGAFKFEEDFRMIAD 122

Query: 105 VVLDKEDEMDCLVTGANFLLKA---VHQEAFTYVDGQK----EFVQIDQNDLYPYLLVNI 157
           + L K DE+DCL+ G  ++         E + + +       +      ++ YP LLVN+
Sbjct: 123 LQLHKLDELDCLIQGLLYVDSVGFNGKPECYYFENPTNPELCQKKPYCLDNPYPMLLVNM 182

Query: 158 GSGVSMIKVDGDGKFERISGTSVGGGTFWGLGRLLTNCKSFDELLELSHQGNNRVIDMLV 217
           GSGVS++ V     ++R++GTS+GGGTF GL  LLT C++F+E LE++ +G++  +D LV
Sbjct: 183 GSGVSILAVYSKDNYKRVTGTSLGGGTFLGLCCLLTGCETFEEALEMAAKGDSTNVDKLV 242

Query: 218 GDIYGGS 224
            DIYGG 
Sbjct: 243 KDIYGGD 249
>2ews_A Pantothenate kinase; PANK, structural genomics, structural genomics consortium, S transferase; HET: ANP; 2.05A {Staphylococcus aureus subsp} SCOP: c.55.1.14 Length = 287 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query229
2i7n_A 360 Pantothenate kinase 1; PANK, transferase; HET: ACO 100.0
2ews_A287 Pantothenate kinase; PANK, structural genomics, st 100.0
1hux_A270 Activator of (R)-2-hydroxyglutaryl-COA dehydratase 98.47
4ehu_A 276 Activator of 2-hydroxyisocaproyl-COA dehydratase; 98.25
2gup_A292 ROK family protein; sugar kinase, streptococcus pn 96.54
3vgl_A 321 Glucokinase; ROK family, transferase; HET: BGC ANP 96.53
2ch5_A 347 NAGK protein; transferase, N-acetylglucosamine, gl 96.2
2aa4_A289 Mannac kinase, putative N-acetylmannosamine kinase 95.95
3bex_A249 Type III pantothenate kinase; actin-like fold, ATP 95.89
2ivn_A 330 O-sialoglycoprotein endopeptidase; UP1 keops compl 95.84
3epq_A302 Putative fructokinase; SCRK, ADP binding, PSI2, MC 95.72
1saz_A 381 Probable butyrate kinase 2; askha (acetate and sug 95.61
3vov_A302 Glucokinase, hexokinase; ROK, sugar kinase, transf 95.59
1z05_A 429 Transcriptional regulator, ROK family; structural 95.19
2e2o_A 299 Hexokinase; acetate and sugar kinases, HSP70, acti 95.0
2ap1_A 327 Putative regulator protein; zinc binding protein, 94.99
4htl_A297 Beta-glucoside kinase; structural genomics, sugar 94.94
3r8e_A321 Hypothetical sugar kinase; ribonuclease H-like mot 94.85
3djc_A266 Type III pantothenate kinase; structural genomics, 94.5
1sz2_A 332 Glucokinase, glucose kinase; ATP-dependent, glucos 94.44
2qm1_A 326 Glucokinase; alpha-beta structure, putative helix- 94.41
4db3_A 327 Glcnac kinase, N-acetyl-D-glucosamine kinase; stru 94.4
1zbs_A 291 Hypothetical protein PG1100; alpha-beta protein., 93.96
3mcp_A 366 Glucokinase; structural genomics, joint center for 93.62
2h3g_X268 Biosynthetic protein; pantothenate kinase, anthrax 92.61
3htv_A310 D-allose kinase, allokinase; NP_418508.1, structur 92.49
2yhw_A 343 Bifunctional UDP-N-acetylglucosamine 2-epimerase/N 92.49
2hoe_A380 N-acetylglucosamine kinase; TM1224, structural gen 92.29
1z6r_A 406 MLC protein; transcriptional repressor, ROK family 91.11
1woq_A267 Inorganic polyphosphate/ATP-glucomannokinase; tran 90.66
1zc6_A305 Probable N-acetylglucosamine kinase; NESG, Q7NU07_ 89.7
1zxo_A 291 Conserved hypothetical protein Q8A1P1; NESG, BTR25 89.17
2q2r_A 373 Glucokinase 1, putative; ATPase hexose kinase fami 88.81
>2i7n_A Pantothenate kinase 1; PANK, transferase; HET: ACO; 1.90A {Homo sapiens} SCOP: c.55.1.14 c.55.1.14 PDB: 3smp_A* 3sms_A* 2i7p_A* 3mk6_A* Back     alignment and structure
Probab=100.00  E-value=2.8e-63  Score=459.36  Aligned_cols=210  Identities=35%  Similarity=0.657  Sum_probs=170.6

Q ss_pred             CCCCeEEEEeCCceeEEEEEeecCCCC----Ccc----------------cCCCCCCC---------CCcCCceEEeEec
Q 027043           19 SQISHLALDIGGSLIKVVYFLRSNGSG----GSV----------------DDSGKKSD---------PVLEGRLHFAKFE   69 (229)
Q Consensus        19 ~~~~~igiDIGGSL~Kivy~~~~~~~~----~~~----------------~~~~~~~~---------~~~~g~l~F~~f~   69 (229)
                      +++|||||||||||+|||||++.+...    +..                -.++.|+.         ..++|+|||++||
T Consensus         1 ~~~~~~~iDiGGtL~Klvy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~F~~f~   80 (360)
T 2i7n_A            1 PPFPWFGMDIGGTLVKLVYFEPKDITAEEEQEEVENLKSIRKYLTSNTAYGKTGIRDVHLELKNLTMCGRKGNLHFIRFP   80 (360)
T ss_dssp             --CCEEEEEECSSEEEEEEEEECC------------CCSHHHHHHHCSBCSSSCEECGGGCEEEEEC--CEEEEEEEEEE
T ss_pred             CCCCEEEEEeCCceEEEEEEeecCCccccccccccccccchhhccccccccccCccccccccccccccCcCceEEEEEee
Confidence            468999999999999999999965211    000                02344442         2346999999999


Q ss_pred             ccCHHHHHHHHHhc-------CceecCCchhhchHHHHHHhCCccceechhhhhhhhHHHHH---hhCCCccEEeeCCCe
Q 027043           70 TSKIIDCLEFIRSK-------NLHLAGGGAYKFADLIKEKLGVVLDKEDEMDCLVTGANFLL---KAVHQEAFTYVDGQK  139 (229)
Q Consensus        70 t~~i~~~i~~i~~~-------~i~~TGGGA~k~~~~~~~~lg~~~~k~dEm~~li~G~~fLl---~~~~~e~f~~~~~~~  139 (229)
                      |++|++|++|++++       .+++|||||+||++.|++++++++.|+|||+|+++|++||+   .++|.|+|+|++...
T Consensus        81 t~~~~~~l~~~~~~~~~~~~~~i~aTGgGa~k~~~~~~~~~g~~~~k~dE~~c~~~G~~~l~~~~~~~~~e~~t~~~~~~  160 (360)
T 2i7n_A           81 SCAMHRFIQMGSEKNFSSLHTTLCATGGGAFKFEEDFRMIADLQLHKLDELDCLIQGLLYVDSVGFNGKPECYYFENPTN  160 (360)
T ss_dssp             GGGHHHHHHHC------------CEESTTTTGGGTTC-------CCBCCHHHHHHHHHHHHHHHCBTTBCSEEEEESTTC
T ss_pred             hhhHHHHHHHHHHcCCCccCcEEEEECCcHHHHHHHHHHHhCCCcceecHHHHHHHHHHHHhcccccCCceeEEeccccc
Confidence            99999999999753       47889999999999999999999999999999999999999   578999999987532


Q ss_pred             ----eeeecCCCCCccEEEEecCCceEEEEEeCCCceEEeeccccCchhHHhhhhhhcCCCCHHHHHHHhhCCCCCcCce
Q 027043          140 ----EFVQIDQNDLYPYLLVNIGSGVSMIKVDGDGKFERISGTSVGGGTFWGLGRLLTNCKSFDELLELSHQGNNRVIDM  215 (229)
Q Consensus       140 ----~~~~~~~~~~yPyLlVNIGSGvSi~kV~~~~~~~RVgGssiGGGT~~GL~~LLtg~~~fdeil~lA~~Gd~~~vDm  215 (229)
                          ...+++..++||||||||||||||++|+++++|+|||||++||||||||++||||+.||||+++||++||+++|||
T Consensus       161 ~~~~~~~~~~~~~~~PyllVnIGsGvSiikv~~~~~f~rvgG~siGGGTflGL~~lLtg~~~~dEl~~lA~~Gd~~~vDl  240 (360)
T 2i7n_A          161 PELCQKKPYCLDNPYPMLLVNMGSGVSILAVYSKDNYKRVTGTSLGGGTFLGLCCLLTGCETFEEALEMAAKGDSTNVDK  240 (360)
T ss_dssp             TTTCEEEEECCSSCCSEEEEEESSSEEEEEEEETTEEEEEEEESCSHHHHHHHHHHHHCCCSHHHHHHHHHHCCGGGTSE
T ss_pred             cccccccccccccCCceEEEEeCCCcEEEEEcCCCCEEEeccccCccHhHHHHHHHHhCCCCHHHHHHHHHcCCCCcccc
Confidence                2345566788999999999999999999988999999999999999999999999999999999999999999999


Q ss_pred             EeeeecCCCCCcCC
Q 027043          216 LVGDIYGGSEYSKV  229 (229)
Q Consensus       216 lV~DIYGg~dY~~i  229 (229)
                      +|+||||+ +|+++
T Consensus       241 lV~DIYg~-~y~~~  253 (360)
T 2i7n_A          241 LVKDIYGG-DYERF  253 (360)
T ss_dssp             EHHHHHSS-CBGGG
T ss_pred             eeeecccC-ccccc
Confidence            99999997 99864
>2ews_A Pantothenate kinase; PANK, structural genomics, structural genomics consortium, S transferase; HET: ANP; 2.05A {Staphylococcus aureus subsp} SCOP: c.55.1.14 Back     alignment and structure
>1hux_A Activator of (R)-2-hydroxyglutaryl-COA dehydratase; actin fold, metal binding protein; HET: ADP; 3.00A {Acidaminococcus fermentans} SCOP: c.55.1.5 Back     alignment and structure
>4ehu_A Activator of 2-hydroxyisocaproyl-COA dehydratase; actin fold, ATPase, electron transfer, ATP/ADP binding; HET: ANP; 1.60A {Clostridium difficile} PDB: 4eht_A* 4eia_A Back     alignment and structure
>2gup_A ROK family protein; sugar kinase, streptococcus pneumoniae TIGR4, AP sucrose, structural genomics, PSI; HET: SUC; 2.01A {Streptococcus pneumoniae} SCOP: c.55.1.10 c.55.1.10 Back     alignment and structure
>3vgl_A Glucokinase; ROK family, transferase; HET: BGC ANP; 1.55A {Streptomyces griseus} PDB: 3vgk_A* 3vgm_A* Back     alignment and structure
>2ch5_A NAGK protein; transferase, N-acetylglucosamine, glcnac, sugar kinase, RIBO H fold, sugar kinase/HSP70/actin superfamily, domain rotati conformation; HET: NAG NDG; 1.9A {Homo sapiens} SCOP: c.55.1.5 c.55.1.5 PDB: 2ch6_A* Back     alignment and structure
>2aa4_A Mannac kinase, putative N-acetylmannosamine kinase; sugar methabolism, structural genomics, PSI, protein structure initiative; 2.20A {Escherichia coli} SCOP: c.55.1.10 c.55.1.10 Back     alignment and structure
>3bex_A Type III pantothenate kinase; actin-like fold, ATP-binding, coenzyme A biosynthesis, cytoplasm, metal-binding, nucleotide-binding, potassium; HET: PAU; 1.51A {Thermotoga maritima} SCOP: c.55.1.13 c.55.1.13 PDB: 3bf1_A* 3bf3_A* 2gtd_A Back     alignment and structure
>2ivn_A O-sialoglycoprotein endopeptidase; UP1 keops complex, Fe/Zn dependent nucleotide phosphatase, metalloprotease, hypothetical protein, zinc; HET: ANP; 1.65A {Pyrococcus abyssi} PDB: 2ivo_A 2ivp_A* Back     alignment and structure
>1saz_A Probable butyrate kinase 2; askha (acetate and sugar kinases, HSC70, actin) superfamily, acetate kinase, isobutyrate kinase; HET: ACP; 2.50A {Thermotoga maritima} SCOP: c.55.1.2 c.55.1.2 PDB: 1x9j_A* Back     alignment and structure
>3vov_A Glucokinase, hexokinase; ROK, sugar kinase, transferase; 2.02A {Thermus thermophilus} Back     alignment and structure
>1z05_A Transcriptional regulator, ROK family; structural genomics, protein structure initiative, midwest center for structural genomics; 2.00A {Vibrio cholerae o1 biovar eltor} SCOP: a.4.5.63 c.55.1.10 c.55.1.10 Back     alignment and structure
>2e2o_A Hexokinase; acetate and sugar kinases, HSP70, actin superfamily, ribonuc fold, sugar kinase, glucose, phosphoryl transfer, transferase; HET: BGC; 1.65A {Sulfolobus tokodaii} PDB: 2e2n_A* 2e2p_A* 2e2q_A* Back     alignment and structure
>2ap1_A Putative regulator protein; zinc binding protein, structural genomics, PSI, protein STRU initiative; 1.90A {Salmonella typhimurium} SCOP: c.55.1.10 c.55.1.10 Back     alignment and structure
>4htl_A Beta-glucoside kinase; structural genomics, sugar kinase, ROK family, PSI-biology, center for structural genomics, MCSG, transferase; HET: MSE; 1.64A {Listeria monocytogenes} Back     alignment and structure
>3r8e_A Hypothetical sugar kinase; ribonuclease H-like motif, structural genomics, joint center structural genomics, JCSG; HET: MSE; 1.65A {Cytophaga hutchinsonii} Back     alignment and structure
>3djc_A Type III pantothenate kinase; structural genomics, putative transfera 2, protein structure initiative; 2.40A {Legionella pneumophila subsp} Back     alignment and structure
>1sz2_A Glucokinase, glucose kinase; ATP-dependent, glucose binding, transferase; HET: MSE BGC; 2.20A {Escherichia coli} SCOP: c.55.1.7 PDB: 1q18_A* Back     alignment and structure
>2qm1_A Glucokinase; alpha-beta structure, putative helix-turn-helix, structural PSI-2, protein structure initiative; HET: MSE; 2.02A {Enterococcus faecalis} Back     alignment and structure
>4db3_A Glcnac kinase, N-acetyl-D-glucosamine kinase; structural genomics, center for structural genomics of infec diseases, csgid, transferase; 1.95A {Vibrio vulnificus} Back     alignment and structure
>1zbs_A Hypothetical protein PG1100; alpha-beta protein., structural genomics, PSI, protein struc initiative; 2.30A {Porphyromonas gingivalis} SCOP: c.55.1.5 c.55.1.5 Back     alignment and structure
>3mcp_A Glucokinase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, transferase; 3.00A {Parabacteroides distasonis} Back     alignment and structure
>2h3g_X Biosynthetic protein; pantothenate kinase, anthrax, type III pantothenate kinase, COAX, COAA, askha; 2.00A {Bacillus anthracis str} Back     alignment and structure
>3htv_A D-allose kinase, allokinase; NP_418508.1, structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; HET: MSE; 1.95A {Escherichia coli k-12} Back     alignment and structure
>2yhw_A Bifunctional UDP-N-acetylglucosamine 2-epimerase/N-acetylmannosamine kinase; transferase, sialic acid, mannac, ROK family; HET: BM3 2PE; 1.64A {Homo sapiens} PDB: 2yhy_A* 2yi1_A* 3eo3_A Back     alignment and structure
>2hoe_A N-acetylglucosamine kinase; TM1224, structural genomics, PSI-2, protein structure initiative, joint center structural genomics, JCSG; 2.46A {Thermotoga maritima} SCOP: a.4.5.63 c.55.1.10 c.55.1.10 Back     alignment and structure
>1z6r_A MLC protein; transcriptional repressor, ROK family protein, DNA binding P helix-turn-helix, phosphotransferase system; 2.70A {Escherichia coli} SCOP: a.4.5.63 c.55.1.10 c.55.1.10 PDB: 3bp8_A Back     alignment and structure
>1woq_A Inorganic polyphosphate/ATP-glucomannokinase; transferase; HET: BGC; 1.80A {Arthrobacter SP} SCOP: c.55.1.10 c.55.1.10 Back     alignment and structure
>1zc6_A Probable N-acetylglucosamine kinase; NESG, Q7NU07_chrvo, CVR23, struc genomics, PSI, protein structure initiative; 2.20A {Chromobacterium violaceum} SCOP: c.55.1.5 c.55.1.5 Back     alignment and structure
>1zxo_A Conserved hypothetical protein Q8A1P1; NESG, BTR25, structural genomics, PSI, protein structure initiative; 3.20A {Bacteroides thetaiotaomicron} SCOP: c.55.1.5 c.55.1.5 Back     alignment and structure
>2q2r_A Glucokinase 1, putative; ATPase hexose kinase family, transferase; HET: BGC ADP; 2.10A {Trypanosoma cruzi} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 229
d2i7na1146 c.55.1.14 (A:236-381) Pantothenate kinase 1, PANK1 3e-33
d2i7na2 212 c.55.1.14 (A:382-593) Pantothenate kinase 1, PANK1 4e-33
d2ewsa1267 c.55.1.14 (A:1-267) Type II pantothenate kinase, C 2e-14
>d2i7na1 c.55.1.14 (A:236-381) Pantothenate kinase 1, PANK1 {Human (Homo sapiens) [TaxId: 9606]} Length = 146 Back     information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: Ribonuclease H-like motif
superfamily: Actin-like ATPase domain
family: Fumble-like
domain: Pantothenate kinase 1, PANK1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  114 bits (288), Expect = 3e-33
 Identities = 30/138 (21%), Positives = 53/138 (38%), Gaps = 36/138 (26%)

Query: 24  LALDIGGSLIKVVYFLRSNGSGGSVDDSGKKSDPVLE----------------------- 60
             +DIGG+L+K+VYF   + +     +  +    + +                       
Sbjct: 4   FGMDIGGTLVKLVYFEPKDITAEEEQEEVENLKSIRKYLTSNTAYGKTGIRDVHLELKNL 63

Query: 61  ------GRLHFAKFETSKIIDCLEFIRSKNLHLA-------GGGAYKFADLIKEKLGVVL 107
                 G LHF +F +  +   ++    KN           GGGA+KF +  +    + L
Sbjct: 64  TMCGRKGNLHFIRFPSCAMHRFIQMGSEKNFSSLHTTLCATGGGAFKFEEDFRMIADLQL 123

Query: 108 DKEDEMDCLVTGANFLLK 125
            K DE+DCL+ G  ++  
Sbjct: 124 HKLDELDCLIQGLLYVDS 141
>d2i7na2 c.55.1.14 (A:382-593) Pantothenate kinase 1, PANK1 {Human (Homo sapiens) [TaxId: 9606]} Length = 212 Back     information, alignment and structure
>d2ewsa1 c.55.1.14 (A:1-267) Type II pantothenate kinase, CoaW {Staphylococcus aureus [TaxId: 1280]} Length = 267 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query229
d2i7na1146 Pantothenate kinase 1, PANK1 {Human (Homo sapiens) 100.0
d2i7na2 212 Pantothenate kinase 1, PANK1 {Human (Homo sapiens) 99.95
d2ewsa1267 Type II pantothenate kinase, CoaW {Staphylococcus 99.57
d1huxa_259 Hydroxyglutaryl-CoA dehydratase component A {Acida 98.43
d1q18a1110 Glucokinase Glk {Escherichia coli [TaxId: 562]} 96.34
d1xc3a1118 Putative fructokinase YhdR {Bacillus subtilis [Tax 96.21
d2ap1a2117 Putative regulator protein YcfX {Salmonella typhim 95.87
d2aa4a1119 N-acetylmannosamine kinase NanK {Escherichia coli 94.27
d2gupa1114 Hypothetical protein SP2142 {Streptococcus pneumon 93.4
d1sz2a1 319 Glucokinase Glk {Escherichia coli [TaxId: 562]} 89.6
d1zc6a1114 Probable N-acetylglucosamine kinase CV2896 {Chromo 88.86
d1woqa1129 Inorganic polyphosphate/ATP-glucomannokinase PPGMK 82.41
>d2i7na1 c.55.1.14 (A:236-381) Pantothenate kinase 1, PANK1 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: Ribonuclease H-like motif
superfamily: Actin-like ATPase domain
family: Fumble-like
domain: Pantothenate kinase 1, PANK1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=8.3e-35  Score=237.48  Aligned_cols=105  Identities=30%  Similarity=0.549  Sum_probs=75.1

Q ss_pred             CCeEEEEeCCceeEEEEEeecCCCCCcc---c-----------------CCCCCCC---------CCcCCceEEeEeccc
Q 027043           21 ISHLALDIGGSLIKVVYFLRSNGSGGSV---D-----------------DSGKKSD---------PVLEGRLHFAKFETS   71 (229)
Q Consensus        21 ~~~igiDIGGSL~Kivy~~~~~~~~~~~---~-----------------~~~~~~~---------~~~~g~l~F~~f~t~   71 (229)
                      .|||||||||||+|||||+|.+......   .                 .++.++.         ..++|+|||++|||+
T Consensus         1 ~p~faiDIGGSL~KlVYfsp~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~G~LhF~kFeT~   80 (146)
T d2i7na1           1 FPWFGMDIGGTLVKLVYFEPKDITAEEEQEEVENLKSIRKYLTSNTAYGKTGIRDVHLELKNLTMCGRKGNLHFIRFPSC   80 (146)
T ss_dssp             CCEEEEEECSSEEEEEEEEECC------------CCSHHHHHHHCSBCSSSCEECGGGCEEEEEC--CEEEEEEEEEEGG
T ss_pred             CCeEEEEeCCceEEEEEEecCCCccccccccchhhhhhhhhccccccccccCCcchhhhhccccccCCCceEEEEEeehh
Confidence            5899999999999999999876421100   0                 1222221         345799999999999


Q ss_pred             CHHHHHHHHHhcC-------ceecCCchhhchHHHHHHhCCccceechhhhhhhhHHHHHh
Q 027043           72 KIIDCLEFIRSKN-------LHLAGGGAYKFADLIKEKLGVVLDKEDEMDCLVTGANFLLK  125 (229)
Q Consensus        72 ~i~~~i~~i~~~~-------i~~TGGGA~k~~~~~~~~lg~~~~k~dEm~~li~G~~fLl~  125 (229)
                      +|++|++|++++.       |++||||||||+++|++++|+++.|+|||+|||+|++||.+
T Consensus        81 ~i~~~l~fi~~~~~~~~~~~I~ATGGGA~Kf~~~~~~~Lgv~v~k~DEM~cLI~Gl~Fl~~  141 (146)
T d2i7na1          81 AMHRFIQMGSEKNFSSLHTTLCATGGGAFKFEEDFRMIADLQLHKLDELDCLIQGLLYVDS  141 (146)
T ss_dssp             GHHHHHHHC------------CEESTTTTGGGTTC-------CCBCCHHHHHHHHHHHHHH
T ss_pred             hHHHHHHHHHhcCCCCCCcEEEEeCccHHHHHHHHHHHcCCceEeccHHHHHHHHHHHHHh
Confidence            9999999999754       57799999999999999999999999999999999999986
>d2i7na2 c.55.1.14 (A:382-593) Pantothenate kinase 1, PANK1 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2ewsa1 c.55.1.14 (A:1-267) Type II pantothenate kinase, CoaW {Staphylococcus aureus [TaxId: 1280]} Back     information, alignment and structure
>d1huxa_ c.55.1.5 (A:) Hydroxyglutaryl-CoA dehydratase component A {Acidaminococcus fermentans [TaxId: 905]} Back     information, alignment and structure
>d1q18a1 c.55.1.7 (A:2-111) Glucokinase Glk {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1xc3a1 c.55.1.10 (A:1-118) Putative fructokinase YhdR {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d2ap1a2 c.55.1.10 (A:1-117) Putative regulator protein YcfX {Salmonella typhimurium [TaxId: 90371]} Back     information, alignment and structure
>d2aa4a1 c.55.1.10 (A:1-119) N-acetylmannosamine kinase NanK {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d2gupa1 c.55.1.10 (A:1-114) Hypothetical protein SP2142 {Streptococcus pneumoniae [TaxId: 1313]} Back     information, alignment and structure
>d1sz2a1 c.55.1.7 (A:3-321) Glucokinase Glk {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1zc6a1 c.55.1.5 (A:8-121) Probable N-acetylglucosamine kinase CV2896 {Chromobacterium violaceum [TaxId: 536]} Back     information, alignment and structure
>d1woqa1 c.55.1.10 (A:11-139) Inorganic polyphosphate/ATP-glucomannokinase PPGMK {Arthrobacter sp. KM [TaxId: 184230]} Back     information, alignment and structure