Citrus Sinensis ID: 027044

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------23
Protein Sequence
MAQQPSFGGAAANPVAVISPQYCSPHPIDLAIVRKVMISSSGGFDVKDTNGNILFKVKDVFAFMHRRRVLLDGAGNPIVTLREKAMSRHHRWQVFRGESTERRHLIFSAKRSRSGWFSSTTKLDVFLANNTREDVCDFRVVEGSSWLFEPSSCTIYAGKSSAIVAQMHEKQTVKSIFLGKDNFMVTVHPNVDYAFIVALIVILDEINRAHSSSSSSGGGGGGGGGAGGG
Secondary Structure (PSIPRED)
ccccccccccccccEEEEcccccccccEEEEEEEEEEEEccccEEEEcccccEEEEEEccccccccEEEEEcccccEEEEEEEcccccEEEEEEEEccccccccEEEEEEEccccccccccEEEEEEccccccccccEEEEEcccccccccEEEEEEcccccEEEEEEEEEEEEEEEEcccEEEEEEEccccHHHHHHHHHHHHHHHcccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
ccccccccccccccEEEEcccccccccEEEEEEEEEEEEccccEEEEEccccEEEEEcccccccccEEEEEcccccEEEEEEEccccccccEEEEEcccccccccEEEEEEcccEEEEccEEEEEEEccccccccccEEEEcccccccccccEEEEEccccEEEEEEEEEccccEEEEcccEEEEEEcccccHHHHHHHHHHHHHHccccccccccccccccccccccc
Coil and Loop (DISEMBL)
maqqpsfggaaanpvavispqycsphpiDLAIVRKVMisssggfdvkdtngnilFKVKDVFAFMHRRRVLldgagnpiVTLREKAMSRhhrwqvfrgesTERRHLIFSakrsrsgwfsstTKLDVFLanntredvcdfrvvegsswlfepssctiyagkSSAIVAQMHEKQTVKSIflgkdnfmvtvhpnVDYAFIVALIVILDEInrahssssssgggggggggaggg
Flexible Loop (DISEMBL)
MAQQPSFGGAAANPVAVISPQYCSPHPIDLAIVRKVMISSSggfdvkdtngnILFKVKDVFAFMHRRRvlldgagnpIVTLrekamsrhhrwqvfrgesterrhlifsakrsrsgwfsstTKLDVFLANNTREDVCDFRVVEGSSWLFEPSSCTIYAGKSSAIVAQMHEKQTVKSIFLGKDNFMVTVHPNVDYAFIVALIVILDEINRAhssssssgggggggggaggg
Low Complexity Region (SEG)
MAQQPSFGGAAANPVAVISPQYCSPHPIDLAIVRKVMISSSGGFDVKDTNGNILFKVKDVFAFMHRRRVLLDGAGNPIVTLREKAMSRHHRWQVFRGESTERRHLIFSAKRSRSGWFSSTTKLDVFLANNTREDVCDFRVVEGSSWLFEPSSCTIYAGKSSAIVAQMHEKQTVKSIFLGKDNFMVTVHPNVDYAFIVALIVILDEINRAHssssssgggggggggaggg
Disordered region (IsUnstruct)
*************PVAVISPQYCSPHPIDLAIVRKVMISSSGGFDVKDTNGNILFKVKDVFAFMHRRRVLLDGAGNPIVTLREKAMSRHHRWQVFRGESTERRHLIFSAKRSRSGWFSSTTKLDVFLANNTREDVCDFRVVEGSSWLFEPSSCTIYAGKSSAIVAQMHEKQTVKSIFLGKDNFMVTVHPNVDYAFIVALIVILDEI***********************
Disordered Region (DISOPRED)
****************VISPQYCSPHPIDLAIVRKVMISSSGGFDVKDTNGNILFKVKDVFAFMHRRRVLLDGAGNPIVTLREKAMSRHHRWQVFRGESTERRHLIFSAKRSRSGWFSSTTKLDVFLANNTREDVCDFRVVEGSSWLFEPSSCTIYAGKSSAIVAQMHEKQTVKSIFLGKDNFMVTVHPNVDYAFIVALIVILDE************************
Disordered Region (DISEMBL)
**********AANPVAVISPQYCSPHPIDLAIVRKVMISSSGGFDVKDTNGNILFKVKDVFAFMHRRRVLLDGAGNPIVTLREKAMSRHHRWQVFRGESTERRHLIFSAKRSRSGWFSSTTKLDVFLANNTREDVCDFRVVEGSSWLFEPSSCTIYAGKSSAIVAQMHEKQTVKSIFLGKDNFMVTVHPNVDYAFIVALIVILDEINR*********************
Disordered Region (DISPRO)
**********AANPVAVISPQYCSPHPIDLAIVRKVMISSSGGFDVKDTNGNILFKVKDVFAFMHRRRVLLDGAGNPIVTLREKAMSRHHRWQVFRGESTERRHLIFSAKRSRSGWFSSTTKLDVFLANNTREDVCDFRVVEGSSWLFEPSSCTIYAGKSSAIVAQMHEKQTVKSIFLGKDNFMVTVHPNVDYAFIVALIVILDEINR*********************
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MAQQPSFGGAAANPVAVISPQYCSPHPIDLAIVRKVMISSSGGFDVKDTNGNILFKVKDVFAFMHRRRVLLDGAGNPIVTLREKAMSRHHRWQVFRGESTERRHLIFSAKRSRSGWFSSTTKLDVFLANNTREDVCDFRVVEGSSWLFEPSSCTIYAGKSSAIVAQMHEKQTVKSIFLGKDNFMVTVHPNVDYAFIVALIVILDEINRAHSSSSSSGGGGGGGGGAGGG
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	229	2.2.26 [Sep-21-2011]
Q9LZX1	217	Protein LURP-one-related	yes	no	0.851	0.898	0.574	8e-63
Q9SF24	194	Protein LURP-one-related	no	no	0.842	0.994	0.535	4e-55
Q9LQ36	224	Protein LURP-one-related	no	no	0.812	0.830	0.531	2e-53
Q9ZQR8	207	Protein LURP1 OS=Arabidop	no	no	0.834	0.922	0.502	6e-50
Q9LSQ1	185	Protein LURP-one-related	no	no	0.781	0.967	0.384	5e-31
Q9LYM3	204	Protein LURP-one-related	no	no	0.790	0.887	0.360	2e-27
B3H5L1	197	Protein LURP-one-related	no	no	0.790	0.918	0.323	1e-18
Q9LVZ8	220	Protein LURP-one-related	no	no	0.786	0.818	0.288	3e-15
A0MFH4	215	Protein LURP-one-related	no	no	0.794	0.846	0.278	7e-11
Q9SSC7	210	Protein LURP-one-related	no	no	0.716	0.780	0.316	6e-10

>sp|Q9LZX1|LOR15_ARATH Protein LURP-one-related 15 OS=Arabidopsis thaliana GN=At5g01750 PE=1 SV=1

 Score =  239 bits (611), Expect = 8e-63,   Method: Compositional matrix adjust.
 Identities = 119/207 (57%), Positives = 149/207 (71%), Gaps = 12/207 (5%)

Query: 2   AQQPSFGGAAANPVAVISPQYCSPHPIDLAIVRKVMISSSGGFDVKDTNGNILFKVKDVF 61
           A  P  GG       V+ P+YC+P+PID+AIVRK+M  + G F + D NGN+LFKVK+  
Sbjct: 18  APTPQAGGV------VVDPKYCAPYPIDMAIVRKMMSLTDGNFVITDVNGNLLFKVKEPV 71

Query: 62  AFMHRRRVLLDGAGNPIVTLREKAMSRHHRWQVFRGESTERRHLIFSAKRSRSGWFSSTT 121
             +H +RVLLDG+G P+VTLREK +S H RWQVFRG ST++R L+++ K  RS      T
Sbjct: 72  FGLHDKRVLLDGSGTPVVTLREKMVSMHDRWQVFRGGSTDQRDLLYTVK--RSSMLQLKT 129

Query: 122 KLDVFLANNTREDVCDFRVVEGSSWLFEPSSCTIYAGKSSAIVAQMHEKQTVKSIFLGKD 181
           KLDVFL +N  E  CDFRV    SWL    SC +YAG+S AIVAQMH K TV+S+FLGKD
Sbjct: 130 KLDVFLGHNKDEKRCDFRV--KGSWL--ERSCVVYAGESDAIVAQMHRKHTVQSVFLGKD 185

Query: 182 NFMVTVHPNVDYAFIVALIVILDEINR 208
           NF VTV+PNVDYAFI +L+VILD++NR
Sbjct: 186 NFSVTVYPNVDYAFIASLVVILDDVNR 212

Might be related to the phospholipid scramblase and tubby-like superfamily of membrane tethered transcription factors.
Arabidopsis thaliana (taxid: 3702)

>sp|Q9SF24|LOR10_ARATH Protein LURP-one-related 10 OS=Arabidopsis thaliana GN=At3g11740 PE=2 SV=2

 Score =  214 bits (545), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 106/198 (53%), Positives = 140/198 (70%), Gaps = 5/198 (2%)

Query: 15  VAVISPQYCSPHPIDLAIVRKVMISSSGGFDVKDTNGNILFKVKDVFAFMHRRRVLLDGA 74
           +A++SP +C+P+PI+L IVRKVM  + G F V D NGN+LFKVK+    +  +R+LLD  
Sbjct: 1   MAIVSPNFCAPYPIELGIVRKVMTLTDGNFAVTDVNGNLLFKVKEPLFSISDKRILLDAY 60

Query: 75  GNPIVTLREKAMSRHHRWQVFRGESTERRHLIFSAKRSRSGWFSSTTKLDVFLANNTRED 134
             PI+TLRE  +S H RW V+RG+ST++  L+++ KRS S       KLD+FLA+N    
Sbjct: 61  DTPILTLRENKVSLHDRWLVYRGKSTDQSDLLYTLKRS-SMIQIMKPKLDIFLAHNKEMK 119

Query: 135 VCDFRVVEGSSWLFEPSSCTIYAGKSSAIVAQMHEKQTVKSIFLGKDNFMVTVHPNVDYA 194
           +CDF V    SW+    SC +YAGKS AIVAQMH+K T +SI +GK NF VTV+PNVD+A
Sbjct: 120 ICDFHV--KGSWI--DRSCVVYAGKSDAIVAQMHKKHTAQSILIGKSNFSVTVYPNVDFA 175

Query: 195 FIVALIVILDEINRAHSS 212
           FIV+LIVILD+INR  S 
Sbjct: 176 FIVSLIVILDDINREDSE 193

Might be related to the phospholipid scramblase and tubby-like superfamily of membrane tethered transcription factors.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9LQ36|LOR1_ARATH Protein LURP-one-related 1 OS=Arabidopsis thaliana GN=At1g33840 PE=2 SV=2

 Score =  209 bits (531), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 102/192 (53%), Positives = 136/192 (70%), Gaps = 6/192 (3%)

Query: 16  AVISPQYCSPHPIDLAIVRKVMISSSGGFDVKDTNGNILFKVKDVFAFMHRRRVLLDGAG 75
            ++ P+YCS HP+DLAIVRKV+  + G F + +  GN+LFKVKD F  +H +R+L+DG G
Sbjct: 26  VIVDPKYCSLHPVDLAIVRKVLKITDGNFVITNAEGNLLFKVKDPFFSLHEKRILMDGFG 85

Query: 76  NPIVTLREKAMSRHHRWQVFRGESTERRHLIFSAKRSRSGWFSSTTKLDVFLANNTREDV 135
             ++TL+ K M+ H RW VFRG STE   L+++ K  RS     TTKLDVFLA+N  +  
Sbjct: 86  TKVLTLKGKIMTMHDRWLVFRGGSTEEVDLLYTVK--RSNMVQITTKLDVFLADNIEQKK 143

Query: 136 CDFRVVEGSSWLFEPSSCTIYAGKSSAIVAQMHEKQTVKSIFLGKDNFMVTVHPNVDYAF 195
           CD+R +EG  WL   +SC +YAG S  I+AQM EK+T++S+  GKDNF +TV+PNVDYAF
Sbjct: 144 CDYR-LEG-VWL--ETSCFVYAGDSDIILAQMREKKTMQSVLFGKDNFCLTVNPNVDYAF 199

Query: 196 IVALIVILDEIN 207
           I +LIVIL EI 
Sbjct: 200 IASLIVILVEIQ 211

Might be related to the phospholipid scramblase and tubby-like superfamily of membrane tethered transcription factors.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9ZQR8|LURP1_ARATH Protein LURP1 OS=Arabidopsis thaliana GN=LURP1 PE=2 SV=1

 Score =  197 bits (500), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 99/197 (50%), Positives = 129/197 (65%), Gaps = 6/197 (3%)

Query: 13  NPVAVISPQYCSPHPIDLAIVRKVMISSSGGFDVKDTNGNILFKVKDVFAFMHRRRVLLD 72
            P  ++  +YCSP+P+ LAIVRKVM  + G F +   +G +LFKVKD    +H +R+LLD
Sbjct: 3   QPCVIVGSKYCSPNPVGLAIVRKVMKITDGNFVITSADGKLLFKVKDPLFSLHGKRILLD 62

Query: 73  GAGNPIVTLREKAMSRHHRWQVFRGESTERRHLIFSAKRSRSGWFSSTTKLDVFLANNTR 132
            +G  ++TLR K M+ H RWQVFRG STE   L+++ K  RS       KL+VFLANN  
Sbjct: 63  CSGAKVLTLRGKMMTMHDRWQVFRGGSTEEGALLYTVK--RSSMIQLAPKLEVFLANNVE 120

Query: 133 EDVCDFRVVEGSSWLFEPSSCTIYAGKSSAIVAQMHEKQTVKSIFLGKDNFMVTVHPNVD 192
           E +CDF+V    +WL    SC +YAG S  I+A M  KQT++  F GKD+F VTV  NVD
Sbjct: 121 EKICDFKV--KGAWL--DDSCVVYAGDSDTIIAHMCGKQTMRGFFFGKDHFSVTVDKNVD 176

Query: 193 YAFIVALIVILDEINRA 209
           YAFI +LIVIL EI +A
Sbjct: 177 YAFIASLIVILVEIEKA 193

Involved in basal defense against virulent oomycetes. Might be related to the phospholipid scramblase and tubby-like superfamily of membrane tethered transcription factors.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9LSQ1|LOR13_ARATH Protein LURP-one-related 13 OS=Arabidopsis thaliana GN=At3g16900 PE=3 SV=1

 Score =  134 bits (337), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 80/208 (38%), Positives = 115/208 (55%), Gaps = 29/208 (13%)

Query: 1   MAQQPSFGGAAANPVAVISPQYCSPHPIDLAIVRKVMISSSGGFDVKDTNGNILFKVKDV 60
           MA+Q         P+  +  ++  P P+DL I          G  VKD  GN +FKVK  
Sbjct: 1   MAKQDPTSSNTMLPL--VGSEFVRPQPLDLTIT---------GDTVKDATGNKVFKVKTP 49

Query: 61  FAFMHRRRVLLDGAGNPIVTLREKAMSRHHRWQVFRGESTERRHLIFSAKRSRSGWFSST 120
              +H +R+L+D   +PIVT++ K  S+H RWQV+RG   + +  IF+ KRS +      
Sbjct: 50  LFGLHNKRILVDPNDSPIVTMKMKVTSKHDRWQVYRGSDLDDK--IFTVKRSSTVQLK-- 105

Query: 121 TKLDVFLANN-TREDVCDFRVVEGSSWLFEPSSCTIYAGKSSAIVAQMHEKQTVKSIFLG 179
           T+++VFL +N TRE  CDF  ++G    F   +CTIY   S+ I+AQ++E         G
Sbjct: 106 TRVEVFLKHNQTRESSCDF-TIKGR---FMKRACTIYVADSTKIIAQVYE---------G 152

Query: 180 KDNFMVTVHPNVDYAFIVALIVILDEIN 207
            +  + T++PNVDYAFIV LI I D IN
Sbjct: 153 HERLVATIYPNVDYAFIVTLIFIFDLIN 180

Might be related to the phospholipid scramblase and tubby-like superfamily of membrane tethered transcription factors.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9LYM3|LOR14_ARATH Protein LURP-one-related 14 OS=Arabidopsis thaliana GN=At3g56180 PE=2 SV=2

 Score =  122 bits (307), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 70/194 (36%), Positives = 117/194 (60%), Gaps = 13/194 (6%)

Query: 15  VAVISPQYCSPHPIDLAIVRKVMISSSGGFDVKDTNGNILFKVKDVFAFMHRRRVLLDGA 74
           ++V+S Q+C+P+P+DL + RKV   S   ++V D +GN+L ++       +R+RV+ D A
Sbjct: 16  ISVVSDQFCNPYPMDLLVKRKVQNFSKDYYEVFDPSGNLLLQIDGQAWGFNRKRVMRDPA 75

Query: 75  GNPIVTLREKAMSRHHRWQVFRGESTERRHLIFSAKRSRSGWFSSTTKLDVFLANNT--- 131
           G  I+++R+K ++  ++W+V  GES ER  L+F+ ++S++   S  T +DVFL  N    
Sbjct: 76  GFTILSMRQKGLALKNKWEVHGGESKEREDLLFTVQQSQA--VSLKTSVDVFLPENNNVK 133

Query: 132 REDVCDFRVVEGSSWLFEPSSCTIYAGKSSAIVAQMHEKQTVKSIFLGKDNFMVTVHPNV 191
           + + CDF    G       S+ +    K+ A++A +    T  S   GK NF V V+P V
Sbjct: 134 KTNTCDFHASGGY------SNISFKVFKADALIAGVGF--TWGSFCKGKYNFKVRVNPEV 185

Query: 192 DYAFIVALIVILDE 205
           DYAFI+AL+V++D+
Sbjct: 186 DYAFIIALLVMVDD 199

Might be related to the phospholipid scramblase and tubby-like superfamily of membrane tethered transcription factors.

Arabidopsis thaliana (taxid: 3702)

>sp|B3H5L1|LOR9_ARATH Protein LURP-one-related 9 OS=Arabidopsis thaliana GN=At3g10986 PE=3 SV=1

 Score = 93.2 bits (230), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 65/201 (32%), Positives = 107/201 (53%), Gaps = 20/201 (9%)

Query: 15  VAVISPQYCSPHPIDLAIVRKVMISSSGGFDVKDTNGNILFKVKDVFAFMHRRRVLLDGA 74
           V+V+   +C+P+  +L + R+        +DV D + N++F V      + R+RVL D A
Sbjct: 2   VSVVGEMFCNPYTTELVVRRRRESLKRERYDVFDLSNNLIFTVDGGIWNIRRKRVLRDAA 61

Query: 75  GNPIVTLREKAM-SRHHRWQVFRGESTERRHLIFSAKRSRSGWFSSTTKLDVFL-ANNTR 132
           G P++++R K +    + W+V++G+STE  +L+FSA+       S  T LDV L  + + 
Sbjct: 62  GIPLLSMRTKGLVPMRYNWEVYKGDSTESDNLLFSAR--EPNLLSFKTSLDVTLPPDQSS 119

Query: 133 EDVC----DF----RVVEGSSWLFEPSSCTIYAGKSSAIVAQMHEKQTVKSIFLGKDNFM 184
            D+     DF    R +  S  LFEP   T        ++A++    T   +  G  +F 
Sbjct: 120 TDISSVEPDFQTFGRYIGSSFKLFEPIHNT--------LLAEVVHDFTWGGLIKGSYSFK 171

Query: 185 VTVHPNVDYAFIVALIVILDE 205
           V V+P VD+AF+VAL+VI D+
Sbjct: 172 VRVNPYVDFAFVVALLVITDD 192

Might be related to the phospholipid scramblase and tubby-like superfamily of membrane tethered transcription factors.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9LVZ8|LOR12_ARATH Protein LURP-one-related 12 OS=Arabidopsis thaliana GN=At3g15810 PE=2 SV=1

 Score = 82.4 bits (202), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 56/194 (28%), Positives = 95/194 (48%), Gaps = 14/194 (7%)

Query: 17  VISPQYCSPHPIDLAIVRKVMISSSGGFDVKDTNGNILFKVKDVFAFMHRRR---VLLDG 73
           V+   Y       L + +  +  +  GF   D  G+I+F+V D +    R     VL+D 
Sbjct: 20  VVDKAYLYQEDKPLTVCKTSLFYTGDGFAAYDCRGDIIFRV-DSYGPDTRDNDEIVLMDA 78

Query: 74  AGNPIVTLREKAMSRHHRWQVFRGESTERRHLIFSAKRSRSGWFSSTTKLDVFLANNTRE 133
            G  ++T++ K  + H RW+ F GE +E +  IFS +RS S     T +++V+  + T E
Sbjct: 79  TGKCLLTVKRKRPTLHQRWEGFLGERSEGQKPIFSVRRS-SIIGRCTMEVEVY--DGTGE 135

Query: 134 DVCDFRVVEGSSWLFEPSSCTIYAGKSSAIVAQMHEKQTVKSIFLGKDNFMVTVHPNVDY 193
           +     +++G    F   SC IY  K   +     +     ++ LG+D F + + P  D 
Sbjct: 136 EY----IIDGD---FSQRSCLIYDTKKCTVAEIKRKVDASTNVMLGRDVFTLEIKPGFDG 188

Query: 194 AFIVALIVILDEIN 207
           AF + L+V+LD+IN
Sbjct: 189 AFAMGLVVVLDQIN 202

Might be related to the phospholipid scramblase and tubby-like superfamily of membrane tethered transcription factors.

Arabidopsis thaliana (taxid: 3702)

>sp|A0MFH4|LOR16_ARATH Protein LURP-one-related 16 OS=Arabidopsis thaliana GN=At5g20640 PE=2 SV=2

 Score = 67.4 bits (163), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 57/205 (27%), Positives = 101/205 (49%), Gaps = 23/205 (11%)

Query: 17  VISPQYCSPHPIDLAIVRKVMISSSGGFDVKDTNGNILFKVKDVFAFMHRRRVLL-DGAG 75
           V+S +Y S     L + R+  + + GGF V ++   ++F+V        + ++LL +G G
Sbjct: 12  VLSRRYSSESETVLVVRRRPPMVNGGGFVVSNSKQVVVFRVDGCGVLGTKGKLLLRNGDG 71

Query: 76  NPIVTLRE-----KAMSR-HHRWQVF--RGESTERRHLIFSAKRSRSGWFSSTTKLDVFL 127
           N ++ +R+     +A++  H++W+ F    E TER  L+F+ K  +       + + + +
Sbjct: 72  NDLLLIRKMGGIVQALNMVHNKWEGFGYDNEGTER--LVFTLKDPKDSCLVQNSSIKILV 129

Query: 128 ------ANNTREDVCDFRVVEGSSWLFEPSSCTIYAGKSSAIVAQMHEKQTVKSIFLGKD 181
                  ++TR +  +   ++GS   F   +C I      AI     EK+  + +   KD
Sbjct: 130 HGKPPKISSTRNNYVE---IKGS---FAERACNIMDSDGKAIAKVRIEKEMEEMVGNKKD 183

Query: 182 NFMVTVHPNVDYAFIVALIVILDEI 206
            + V V PNVD +FIV LI ILD I
Sbjct: 184 LYHVIVKPNVDQSFIVGLIAILDYI 208

Might be related to the phospholipid scramblase and tubby-like superfamily of membrane tethered transcription factors.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9SSC7|LOR5_ARATH Protein LURP-one-related 5 OS=Arabidopsis thaliana GN=At1g80120 PE=1 SV=1

 Score = 64.3 bits (155), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 57/180 (31%), Positives = 94/180 (52%), Gaps = 16/180 (8%)

Query: 33  VRKVMISSSG-GFDVKDTNGNILFKVKDVFAFMHRRR----VLLDGAGNPIVTLREKAMS 87
           VRK  +  +G GF V D  G+++F+V D +   + R     VL+D  G  ++TLR K  S
Sbjct: 21  VRKTSLFFAGDGFTVYDCKGSLVFRV-DSYGGPNTRDTDEVVLMDAHGRCLLTLRRKRPS 79

Query: 88  RHHRWQVFRGESTERRHLIFSAKRSRSGWFSSTTKLDVFLANNTREDVCDFRVVEGSSWL 147
              RW+ + GE ++ +  IF  +RS     +S T ++V+         C   ++EGS   
Sbjct: 80  LRRRWEGYLGERSDGQKPIFGVRRSSIIGRNSVT-VEVYGDYQ-----CSEYLIEGS--- 130

Query: 148 FEPSSCTIYAGKSSAIVAQMHEK-QTVKSIFLGKDNFMVTVHPNVDYAFIVALIVILDEI 206
           F   +CT+   ++   VA++  K     ++ LGKD F + V P  D AF + L+++LD+I
Sbjct: 131 FGARNCTVVEAETRRKVAEIRRKVDASTNVMLGKDVFSLNVKPGFDGAFAMGLVLVLDQI 190

Might be related to the phospholipid scramblase and tubby-like superfamily of membrane tethered transcription factors.

Arabidopsis thaliana (taxid: 3702)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	229
356568182	216	PREDICTED: protein LURP-one-related 15-l	0.834	0.884	0.629	5e-66
388504720	214	unknown [Lotus japonicus]	0.847	0.906	0.635	2e-65
388516681	216	unknown [Lotus japonicus]	0.834	0.884	0.639	3e-65
255637572	216	unknown [Glycine max]	0.834	0.884	0.624	4e-65
255586349	215	conserved hypothetical protein [Ricinus	0.912	0.972	0.597	1e-64
356532197	215	PREDICTED: protein LURP-one-related 15-l	0.860	0.916	0.623	5e-64
357506497	215	hypothetical protein MTR_7g072140 [Medic	0.873	0.930	0.592	2e-62
356496281	198	PREDICTED: protein LURP-one-related 15-l	0.825	0.954	0.612	2e-61
357506501	226	hypothetical protein MTR_7g072170 [Medic	0.860	0.871	0.588	4e-61
30679390	217	LURP-one-related 15 protein [Arabidopsis	0.851	0.898	0.574	5e-61

>gi|356568182|ref|XP_003552292.1| PREDICTED: protein LURP-one-related 15-like [Glycine max]

 Score =  256 bits (654), Expect = 5e-66,   Method: Compositional matrix adjust.
 Identities = 124/197 (62%), Positives = 150/197 (76%), Gaps = 6/197 (3%)

Query: 12  ANPVAVISPQYCSPHPIDLAIVRKVMISSSGGFDVKDTNGNILFKVKDVFAFMHRRRVLL 71
           A P AVI PQ+C+P+P+DLA+V+KVM  S G F V D NGN++FKVK     +  RR+L+
Sbjct: 21  AVPTAVIGPQFCAPYPLDLAVVKKVMTLSDGNFVVTDVNGNVVFKVKGSLMTLRDRRILV 80

Query: 72  DGAGNPIVTLREKAMSRHHRWQVFRGESTERRHLIFSAKRSRSGWFSSTTKLDVFLANNT 131
           D AGNP+VTLR K M+ H RWQ FRGESTE + LIF+ KRS    F   TKLDVFLANNT
Sbjct: 81  DAAGNPLVTLRRKIMTAHDRWQAFRGESTEAKDLIFTLKRSSLIQFK--TKLDVFLANNT 138

Query: 132 REDVCDFRVVEGSSWLFEPSSCTIYAGKSSAIVAQMHEKQTVKSIFLGKDNFMVTVHPNV 191
           +EDVCDF+V    SWL    SC +YAG+S+ IVAQMH+K TV+SI +GKD FMVTV+PN+
Sbjct: 139 KEDVCDFKV--KGSWL--ERSCVVYAGESNNIVAQMHKKHTVQSILIGKDQFMVTVYPNI 194

Query: 192 DYAFIVALIVILDEINR 208
           DYAF+VALIVILDEIN 
Sbjct: 195 DYAFVVALIVILDEINE 211

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388504720|gb|AFK40426.1| unknown [Lotus japonicus]

 Score =  254 bits (649), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 127/200 (63%), Positives = 148/200 (74%), Gaps = 6/200 (3%)

Query: 12  ANPVAVISPQYCSPHPIDLAIVRKVMISSSGGFDVKDTNGNILFKVKDVFAFMHRRRVLL 71
           A P  V  PQYC+P+P+DLAIV+KVM  S G F V D NGNI+FKVK     +  RRVL+
Sbjct: 21  AVPTTVFGPQYCAPYPVDLAIVKKVMTISDGNFVVTDINGNIVFKVKGSLLTLRDRRVLI 80

Query: 72  DGAGNPIVTLREKAMSRHHRWQVFRGESTERRHLIFSAKRSRSGWFSSTTKLDVFLANNT 131
           D AGNPI TLR K M+ H RWQ +RGESTE + LIF+ KRS    F   TKLDVFLA NT
Sbjct: 81  DAAGNPIATLRRKIMTAHDRWQAYRGESTEAKDLIFTLKRSSLIQFK--TKLDVFLATNT 138

Query: 132 REDVCDFRVVEGSSWLFEPSSCTIYAGKSSAIVAQMHEKQTVKSIFLGKDNFMVTVHPNV 191
           +EDVCDF+V    SW FE  SC +YAG+S+ IVAQMH+K TV+SI +GKDNF VTV+PN+
Sbjct: 139 KEDVCDFKV--KGSW-FE-RSCVVYAGESNTIVAQMHKKHTVQSILIGKDNFTVTVYPNI 194

Query: 192 DYAFIVALIVILDEINRAHS 211
           DYAFIVALIVILDEIN   S
Sbjct: 195 DYAFIVALIVILDEINEDES 214

Source: Lotus japonicus

Species: Lotus japonicus

Genus: Lotus

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388516681|gb|AFK46402.1| unknown [Lotus japonicus]

 Score =  253 bits (647), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 126/197 (63%), Positives = 147/197 (74%), Gaps = 6/197 (3%)

Query: 12  ANPVAVISPQYCSPHPIDLAIVRKVMISSSGGFDVKDTNGNILFKVKDVFAFMHRRRVLL 71
           A P  V  PQYC+P+P+DLAIV+KVM  S G F V D NGNI+FKVK     +  RRVL+
Sbjct: 21  AVPTTVFGPQYCAPYPVDLAIVKKVMTISDGNFVVTDINGNIVFKVKGSLLTLRDRRVLI 80

Query: 72  DGAGNPIVTLREKAMSRHHRWQVFRGESTERRHLIFSAKRSRSGWFSSTTKLDVFLANNT 131
           D AGNPI TLR K M+ H RWQ +RGESTE + LIF+ KRS    F   TKLDVFLA NT
Sbjct: 81  DAAGNPIATLRRKIMTAHDRWQAYRGESTEAKDLIFTLKRSSLIQFK--TKLDVFLATNT 138

Query: 132 REDVCDFRVVEGSSWLFEPSSCTIYAGKSSAIVAQMHEKQTVKSIFLGKDNFMVTVHPNV 191
           +EDVCDF+V    SW FE  SC +YAG+S+ IVAQMH+K TV+SI +GKDNF VTV+PN+
Sbjct: 139 KEDVCDFKV--KGSW-FE-RSCVVYAGESNTIVAQMHKKHTVQSILIGKDNFTVTVYPNI 194

Query: 192 DYAFIVALIVILDEINR 208
           DYAFIVALIVILDEIN 
Sbjct: 195 DYAFIVALIVILDEINE 211

Source: Lotus japonicus

Species: Lotus japonicus

Genus: Lotus

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255637572|gb|ACU19112.1| unknown [Glycine max]

 Score =  253 bits (646), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 123/197 (62%), Positives = 149/197 (75%), Gaps = 6/197 (3%)

Query: 12  ANPVAVISPQYCSPHPIDLAIVRKVMISSSGGFDVKDTNGNILFKVKDVFAFMHRRRVLL 71
           A P AVI PQ+C+ +P+DLA+V+KVM  S G F V D NGN++FKVK     +  RR+L+
Sbjct: 21  AVPTAVIGPQFCASYPLDLAVVKKVMTLSDGNFVVTDVNGNVVFKVKGSLMTLRDRRILV 80

Query: 72  DGAGNPIVTLREKAMSRHHRWQVFRGESTERRHLIFSAKRSRSGWFSSTTKLDVFLANNT 131
           D AGNP+VTLR K M+ H RWQ FRGESTE + LIF+ KRS    F   TKLDVFLANNT
Sbjct: 81  DAAGNPLVTLRRKIMTTHDRWQAFRGESTEAKDLIFTLKRSSLIQFK--TKLDVFLANNT 138

Query: 132 REDVCDFRVVEGSSWLFEPSSCTIYAGKSSAIVAQMHEKQTVKSIFLGKDNFMVTVHPNV 191
           +EDVCDF+V    SWL    SC +YAG+S+ IVAQMH+K TV+SI +GKD FMVTV+PN+
Sbjct: 139 KEDVCDFKV--KGSWL--ERSCVVYAGESNNIVAQMHKKHTVQSILIGKDQFMVTVYPNI 194

Query: 192 DYAFIVALIVILDEINR 208
           DYAF+VALIVILDEIN 
Sbjct: 195 DYAFVVALIVILDEINE 211

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255586349|ref|XP_002533824.1| conserved hypothetical protein [Ricinus communis] gi|223526241|gb|EEF28559.1| conserved hypothetical protein [Ricinus communis]

 Score =  251 bits (641), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 132/221 (59%), Positives = 164/221 (74%), Gaps = 12/221 (5%)

Query: 1   MAQQPSFGGAA--ANPVAVISPQYCSPHPIDLAIVRKVMISSSGGFDVKDTNGNILFKVK 58
           MA + S   AA  ANPVA+ISPQYC P+P+DLAIVRKV   + G FDV+D NGNI+FKVK
Sbjct: 1   MATEASGTSAAPLANPVAIISPQYCYPYPVDLAIVRKVWTLADGNFDVQDINGNIIFKVK 60

Query: 59  DV-FAFMHRRRVLLDGAGNPIVTLREKAMSRHHRWQVFRGESTERRHLIFSAKRSRSGWF 117
           ++   F+H+++++LD AGN IVTLR KAM+ H RWQVFRGEST+ + +IF+AK      F
Sbjct: 61  EILLTFLHKKKLILDPAGNTIVTLRRKAMTAHSRWQVFRGESTDPKDVIFTAK--THSIF 118

Query: 118 SSTTKLDVFLA-NNTREDVCDFRVVEGSSWLFEPSSCTIYAG--KSSAIVAQMHEKQTVK 174
              TKLDVFLA NNT E VCDF+ V+GS   F   SC +YAG   S+ IVAQMH+K + +
Sbjct: 119 YLKTKLDVFLANNNTDEKVCDFK-VKGS---FFERSCVVYAGDEDSTTIVAQMHKKHSAQ 174

Query: 175 SIFLGKDNFMVTVHPNVDYAFIVALIVILDEINRAHSSSSS 215
           SI LGK NF VTV+PN+DYAFIVALIVILD+INR    ++S
Sbjct: 175 SILLGKTNFTVTVYPNIDYAFIVALIVILDDINREAQDAAS 215

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356532197|ref|XP_003534660.1| PREDICTED: protein LURP-one-related 15-like [Glycine max]

 Score =  249 bits (637), Expect = 5e-64,   Method: Compositional matrix adjust.
 Identities = 129/207 (62%), Positives = 155/207 (74%), Gaps = 10/207 (4%)

Query: 4   QPSFGGAA---ANPVAVISPQYCSPHPIDLAIVRKVMISSSGGFDVKDTNGNILFKVKDV 60
           QP    +A   A P AVI PQ+C+P+P+DLA+V+KVM + S  F V D NGNI+FKVK  
Sbjct: 10  QPYPSASAPMPAVPSAVIGPQFCAPYPVDLAVVKKVM-TISDNFVVTDVNGNIVFKVKGS 68

Query: 61  FAFMHRRRVLLDGAGNPIVTLREKAMSRHHRWQVFRGESTERRHLIFSAKRSRSGWFSST 120
            A +  RRVLLD AGNP+VTLR K M+ H RWQ FRGEST+ + LIF+ KRS    F   
Sbjct: 69  LATLRDRRVLLDAAGNPLVTLRRKIMTAHDRWQAFRGESTDAKDLIFTLKRSSLIQFK-- 126

Query: 121 TKLDVFLANNTREDVCDFRVVEGSSWLFEPSSCTIYAGKSSAIVAQMHEKQTVKSIFLGK 180
           TKL VFLANNT+EDVCDF+V    SWL    SC +YAG+S+ IVAQMH+K TV+SI +GK
Sbjct: 127 TKLHVFLANNTKEDVCDFKV--KGSWL--ERSCVVYAGESNNIVAQMHKKHTVQSILIGK 182

Query: 181 DNFMVTVHPNVDYAFIVALIVILDEIN 207
           D+FMVTV+PN+DYAFIVALIVILDEIN
Sbjct: 183 DHFMVTVYPNIDYAFIVALIVILDEIN 209

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357506497|ref|XP_003623537.1| hypothetical protein MTR_7g072140 [Medicago truncatula] gi|355498552|gb|AES79755.1| hypothetical protein MTR_7g072140 [Medicago truncatula]

 Score =  244 bits (624), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 122/206 (59%), Positives = 149/206 (72%), Gaps = 6/206 (2%)

Query: 3   QQPSFGGAAANPVAVISPQYCSPHPIDLAIVRKVMISSSGGFDVKDTNGNILFKVKDVFA 62
           Q  S     A+P A+   QYC+P+P+DLA+V+KVM  S G F V D NGNI+FKVK    
Sbjct: 9   QYASAPPMPAHPTAIFGQQYCAPYPVDLAVVKKVMTISDGNFAVTDVNGNIVFKVKGSLL 68

Query: 63  FMHRRRVLLDGAGNPIVTLREKAMSRHHRWQVFRGESTERRHLIFSAKRSRSGWFSSTTK 122
            +  RRVL+D AG PI TLR K M+ H RW+ FRGEST+ + LIF+ KRS    F   TK
Sbjct: 69  TLRDRRVLVDAAGYPIATLRRKIMTMHDRWEAFRGESTDAKDLIFTLKRSSLIQFK--TK 126

Query: 123 LDVFLANNTREDVCDFRVVEGSSWLFEPSSCTIYAGKSSAIVAQMHEKQTVKSIFLGKDN 182
           LDVFLA+N +E+VCDF+V    SW     SC +YAG+S+ IVAQMH+K TV+SI +GKDN
Sbjct: 127 LDVFLASNKKENVCDFKV--KGSWF--DRSCIVYAGESNNIVAQMHKKYTVQSILIGKDN 182

Query: 183 FMVTVHPNVDYAFIVALIVILDEINR 208
           FMVT++PNVDYAFIVALIVILDEINR
Sbjct: 183 FMVTIYPNVDYAFIVALIVILDEINR 208

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356496281|ref|XP_003516997.1| PREDICTED: protein LURP-one-related 15-like [Glycine max]

 Score =  241 bits (614), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 120/196 (61%), Positives = 148/196 (75%), Gaps = 7/196 (3%)

Query: 13  NPVAVISPQYCSPHPIDLAIVRKVMISSSGGFDVKDTNGNILFKVKDVFAFMHRRRVLLD 72
            P  +I+P+YC+P+ +DLAIVRKV+ + +  F V D NG I+F +K     +H  RVLLD
Sbjct: 5   QPSGIINPKYCAPYNVDLAIVRKVL-ALTDSFTVTDVNGQIVFSLKASLMTLHDHRVLLD 63

Query: 73  GAGNPIVTLREKAMSRHHRWQVFRGESTERRHLIFSAKRSRSGWFSSTTKLDVFLANNTR 132
            AG P+VTLR K MS H RWQ+FRGESTE + LIFS KRS   +F   TKLDVFLANNT+
Sbjct: 64  AAGEPVVTLRRKLMSAHDRWQIFRGESTEPKDLIFSVKRS--SFFQLKTKLDVFLANNTK 121

Query: 133 EDVCDFRVVEGSSWLFEPSSCTIYAGKSSAIVAQMHEKQTVKSIFLGKDNFMVTVHPNVD 192
           E+VCDF+V    SW FE  SC +YAG+S  IVAQMH+K TV+SI  GKDNFMVTV+PN+D
Sbjct: 122 EEVCDFKV--KGSW-FE-RSCVVYAGESLNIVAQMHKKHTVQSIVFGKDNFMVTVYPNID 177

Query: 193 YAFIVALIVILDEINR 208
           YAFIVALI+ILDEI++
Sbjct: 178 YAFIVALILILDEIHK 193

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357506501|ref|XP_003623539.1| hypothetical protein MTR_7g072170 [Medicago truncatula] gi|355498554|gb|AES79757.1| hypothetical protein MTR_7g072170 [Medicago truncatula]

 Score =  240 bits (612), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 120/204 (58%), Positives = 149/204 (73%), Gaps = 7/204 (3%)

Query: 14  PVAVISPQYCSPHPIDLAIVRKVMISSSGGFDVKDTNGNILFKVKDVFAFMHRRRVLLDG 73
           P  +  PQYC+P+P+DLA+V+KV+  S G F V D NGNI+FKVK        RRVL+D 
Sbjct: 20  PTTIFGPQYCAPYPLDLAVVKKVIAISDGNFVVTDVNGNIVFKVKVSLLTFRDRRVLVDA 79

Query: 74  AGNPIVTLREKAMSRHHRWQVFRGESTERRHLIFSAKRSRSGWFSSTTKLDVFLANNTRE 133
           A NPI TLR K ++ H RW+ +RGEST+ + LIF+ K  RS      TKLDVFLANNT+E
Sbjct: 80  ADNPITTLRRKIVTMHDRWEAYRGESTDSKDLIFTLK--RSSLIQMKTKLDVFLANNTKE 137

Query: 134 DVCDFRVVEGSSWLFEPSSCTIYAGKSSAIVAQMHEKQTVKSIFLGKDNFMVTVHPNVDY 193
           DVCDF+V    SW FE  SC +YAG+S+ IVAQMH+K TV+S+ +GKD+FMVT++PNVDY
Sbjct: 138 DVCDFKV--KGSW-FE-RSCIVYAGESNNIVAQMHKKHTVQSLLIGKDHFMVTIYPNVDY 193

Query: 194 AFIVALIVILDEINRAHSSSSSSG 217
           AFIVALIVIL+EIN A    S SG
Sbjct: 194 AFIVALIVILNEIN-ADEKGSESG 216

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|30679390|ref|NP_850751.1| LURP-one-related 15 protein [Arabidopsis thaliana] gi|75181359|sp|Q9LZX1.1|LOR15_ARATH RecName: Full=Protein LURP-one-related 15 gi|13926237|gb|AAK49593.1|AF372877_1 AT5g01750/T20L15_20 [Arabidopsis thaliana] gi|7329648|emb|CAB82745.1| putative protein [Arabidopsis thaliana] gi|22655412|gb|AAM98298.1| At5g01750/T20L15_20 [Arabidopsis thaliana] gi|332003004|gb|AED90387.1| LURP-one-related 15 protein [Arabidopsis thaliana]

 Score =  239 bits (611), Expect = 5e-61,   Method: Compositional matrix adjust.
 Identities = 119/207 (57%), Positives = 149/207 (71%), Gaps = 12/207 (5%)

Query: 2   AQQPSFGGAAANPVAVISPQYCSPHPIDLAIVRKVMISSSGGFDVKDTNGNILFKVKDVF 61
           A  P  GG       V+ P+YC+P+PID+AIVRK+M  + G F + D NGN+LFKVK+  
Sbjct: 18  APTPQAGGV------VVDPKYCAPYPIDMAIVRKMMSLTDGNFVITDVNGNLLFKVKEPV 71

Query: 62  AFMHRRRVLLDGAGNPIVTLREKAMSRHHRWQVFRGESTERRHLIFSAKRSRSGWFSSTT 121
             +H +RVLLDG+G P+VTLREK +S H RWQVFRG ST++R L+++ K  RS      T
Sbjct: 72  FGLHDKRVLLDGSGTPVVTLREKMVSMHDRWQVFRGGSTDQRDLLYTVK--RSSMLQLKT 129

Query: 122 KLDVFLANNTREDVCDFRVVEGSSWLFEPSSCTIYAGKSSAIVAQMHEKQTVKSIFLGKD 181
           KLDVFL +N  E  CDFRV    SWL    SC +YAG+S AIVAQMH K TV+S+FLGKD
Sbjct: 130 KLDVFLGHNKDEKRCDFRV--KGSWL--ERSCVVYAGESDAIVAQMHRKHTVQSVFLGKD 185

Query: 182 NFMVTVHPNVDYAFIVALIVILDEINR 208
           NF VTV+PNVDYAFI +L+VILD++NR
Sbjct: 186 NFSVTVYPNVDYAFIASLVVILDDVNR 212

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	229
TAIR|locus:2181082	217	AT5G01750 "AT5G01750" [Arabido	0.868	0.917	0.581	4e-58
TAIR|locus:2081481	194	AT3G11740 "AT3G11740" [Arabido	0.825	0.974	0.541	5.1e-51
TAIR|locus:2055250	207	LURP1 "AT2G14560" [Arabidopsis	0.829	0.917	0.510	6.9e-47
TAIR|locus:2086062	185	AT3G16900 "AT3G16900" [Arabido	0.781	0.967	0.384	1.5e-28
TAIR|locus:2078506	204	AT3G56180 "AT3G56180" [Arabido	0.790	0.887	0.371	2.8e-27
TAIR|locus:4515103053	197	AT3G10986 "AT3G10986" [Arabido	0.790	0.918	0.338	4.4e-20
TAIR|locus:2093242	220	AT3G15810 "AT3G15810" [Arabido	0.786	0.818	0.288	1.8e-16
TAIR|locus:2016299	210	AT1G80120 "AT1G80120" [Arabido	0.716	0.780	0.316	1.3e-15
TAIR|locus:2180459	215	AT5G20640 "AT5G20640" [Arabido	0.799	0.851	0.276	1.5e-12
TAIR|locus:2064179	196	AT2G38640 "AT2G38640" [Arabido	0.737	0.862	0.280	1.7e-11

TAIR|locus:2181082 AT5G01750 "AT5G01750" [Arabidopsis thaliana (taxid:3702)]

 Score = 597 (215.2 bits), Expect = 4.0e-58, P = 4.0e-58
 Identities = 121/208 (58%), Positives = 152/208 (73%)

Query:     4 QPSFGGAAANPVA---VISPQYCSPHPIDLAIVRKVMISSSGGFDVKDTNGNILFKVKDV 60
             Q S    A  P A   V+ P+YC+P+PID+AIVRK+M  + G F + D NGN+LFKVK+ 
Sbjct:    11 QGSGPSGAPTPQAGGVVVDPKYCAPYPIDMAIVRKMMSLTDGNFVITDVNGNLLFKVKEP 70

Query:    61 FAFMHRRRVLLDGAGNPIVTLREKAMSRHHRWQVFRGESTERRHLIFSAKRSRSGWFSST 120
                +H +RVLLDG+G P+VTLREK +S H RWQVFRG ST++R L+++ KRS        
Sbjct:    71 VFGLHDKRVLLDGSGTPVVTLREKMVSMHDRWQVFRGGSTDQRDLLYTVKRS--SMLQLK 128

Query:   121 TKLDVFLANNTREDVCDFRVVEGSSWLFEPSSCTIYAGKSSAIVAQMHEKQTVKSIFLGK 180
             TKLDVFL +N  E  CDFRV +GS WL    SC +YAG+S AIVAQMH K TV+S+FLGK
Sbjct:   129 TKLDVFLGHNKDEKRCDFRV-KGS-WL--ERSCVVYAGESDAIVAQMHRKHTVQSVFLGK 184

Query:   181 DNFMVTVHPNVDYAFIVALIVILDEINR 208
             DNF VTV+PNVDYAFI +L+VILD++NR
Sbjct:   185 DNFSVTVYPNVDYAFIASLVVILDDVNR 212

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0009507 "chloroplast" evidence=IDA

GO:0006569 "tryptophan catabolic process" evidence=RCA

GO:0006995 "cellular response to nitrogen starvation" evidence=RCA

GO:0009684 "indoleacetic acid biosynthetic process" evidence=RCA

GO:0030003 "cellular cation homeostasis" evidence=RCA

GO:0070838 "divalent metal ion transport" evidence=RCA

TAIR|locus:2081481 AT3G11740 "AT3G11740" [Arabidopsis thaliana (taxid:3702)]

 Score = 530 (191.6 bits), Expect = 5.1e-51, P = 5.1e-51
 Identities = 105/194 (54%), Positives = 140/194 (72%)

Query:    15 VAVISPQYCSPHPIDLAIVRKVMISSSGGFDVKDTNGNILFKVKDVFAFMHRRRVLLDGA 74
             +A++SP +C+P+PI+L IVRKVM  + G F V D NGN+LFKVK+    +  +R+LLD  
Sbjct:     1 MAIVSPNFCAPYPIELGIVRKVMTLTDGNFAVTDVNGNLLFKVKEPLFSISDKRILLDAY 60

Query:    75 GNPIVTLREKAMSRHHRWQVFRGESTERRHLIFSAKRSRSGWFSSTTKLDVFLANNTRED 134
               PI+TLRE  +S H RW V+RG+ST++  L+++ KRS         KLD+FLA+N    
Sbjct:    61 DTPILTLRENKVSLHDRWLVYRGKSTDQSDLLYTLKRSSMIQIMKP-KLDIFLAHNKEMK 119

Query:   135 VCDFRVVEGSSWLFEPSSCTIYAGKSSAIVAQMHEKQTVKSIFLGKDNFMVTVHPNVDYA 194
             +CDF V +GS W+    SC +YAGKS AIVAQMH+K T +SI +GK NF VTV+PNVD+A
Sbjct:   120 ICDFHV-KGS-WI--DRSCVVYAGKSDAIVAQMHKKHTAQSILIGKSNFSVTVYPNVDFA 175

Query:   195 FIVALIVILDEINR 208
             FIV+LIVILD+INR
Sbjct:   176 FIVSLIVILDDINR 189

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2055250 LURP1 "AT2G14560" [Arabidopsis thaliana (taxid:3702)]

 Score = 491 (177.9 bits), Expect = 6.9e-47, P = 6.9e-47
 Identities = 100/196 (51%), Positives = 132/196 (67%)

Query:    14 PVAVISPQYCSPHPIDLAIVRKVMISSSGGFDVKDTNGNILFKVKDVFAFMHRRRVLLDG 73
             P  ++  +YCSP+P+ LAIVRKVM  + G F +   +G +LFKVKD    +H +R+LLD 
Sbjct:     4 PCVIVGSKYCSPNPVGLAIVRKVMKITDGNFVITSADGKLLFKVKDPLFSLHGKRILLDC 63

Query:    74 AGNPIVTLREKAMSRHHRWQVFRGESTERRHLIFSAKRSRSGWFSSTTKLDVFLANNTRE 133
             +G  ++TLR K M+ H RWQVFRG STE   L+++ KRS         KL+VFLANN  E
Sbjct:    64 SGAKVLTLRGKMMTMHDRWQVFRGGSTEEGALLYTVKRS--SMIQLAPKLEVFLANNVEE 121

Query:   134 DVCDFRVVEGSSWLFEPSSCTIYAGKSSAIVAQMHEKQTVKSIFLGKDNFMVTVHPNVDY 193
              +CDF+V +G+ WL +  SC +YAG S  I+A M  KQT++  F GKD+F VTV  NVDY
Sbjct:   122 KICDFKV-KGA-WLDD--SCVVYAGDSDTIIAHMCGKQTMRGFFFGKDHFSVTVDKNVDY 177

Query:   194 AFIVALIVILDEINRA 209
             AFI +LIVIL EI +A
Sbjct:   178 AFIASLIVILVEIEKA 193

GO:0003674 "molecular_function" evidence=ND

GO:0009751 "response to salicylic acid stimulus" evidence=IEP

GO:0050832 "defense response to fungus" evidence=RCA;IMP

GO:0000165 "MAPK cascade" evidence=RCA

GO:0006612 "protein targeting to membrane" evidence=RCA

GO:0009595 "detection of biotic stimulus" evidence=RCA

GO:0009697 "salicylic acid biosynthetic process" evidence=RCA

GO:0009862 "systemic acquired resistance, salicylic acid mediated signaling pathway" evidence=RCA

GO:0009867 "jasmonic acid mediated signaling pathway" evidence=RCA

GO:0010200 "response to chitin" evidence=RCA

GO:0010310 "regulation of hydrogen peroxide metabolic process" evidence=RCA

GO:0010363 "regulation of plant-type hypersensitive response" evidence=RCA

GO:0031348 "negative regulation of defense response" evidence=RCA

GO:0042742 "defense response to bacterium" evidence=RCA

GO:0043069 "negative regulation of programmed cell death" evidence=RCA

GO:0043900 "regulation of multi-organism process" evidence=RCA

GO:0045088 "regulation of innate immune response" evidence=RCA

TAIR|locus:2086062 AT3G16900 "AT3G16900" [Arabidopsis thaliana (taxid:3702)]

 Score = 318 (117.0 bits), Expect = 1.5e-28, P = 1.5e-28
 Identities = 80/208 (38%), Positives = 115/208 (55%)

Query:     1 MAQQPSFGGAAANPVAVISPQYCSPHPIDLAIVRKVMISSSGGFDVKDTNGNILFKVKDV 60
             MA+Q         P+  +  ++  P P+DL I          G  VKD  GN +FKVK  
Sbjct:     1 MAKQDPTSSNTMLPL--VGSEFVRPQPLDLTIT---------GDTVKDATGNKVFKVKTP 49

Query:    61 FAFMHRRRVLLDGAGNPIVTLREKAMSRHHRWQVFRGESTERRHLIFSAKRSRSGWFSST 120
                +H +R+L+D   +PIVT++ K  S+H RWQV+RG   + +  IF+ KRS +      
Sbjct:    50 LFGLHNKRILVDPNDSPIVTMKMKVTSKHDRWQVYRGSDLDDK--IFTVKRSST--VQLK 105

Query:   121 TKLDVFLANN-TREDVCDFRVVEGSSWLFEPSSCTIYAGKSSAIVAQMHEKQTVKSIFLG 179
             T+++VFL +N TRE  CDF  ++G    F   +CTIY   S+ I+AQ++E         G
Sbjct:   106 TRVEVFLKHNQTRESSCDF-TIKGR---FMKRACTIYVADSTKIIAQVYE---------G 152

Query:   180 KDNFMVTVHPNVDYAFIVALIVILDEIN 207
              +  + T++PNVDYAFIV LI I D IN
Sbjct:   153 HERLVATIYPNVDYAFIVTLIFIFDLIN 180

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2078506 AT3G56180 "AT3G56180" [Arabidopsis thaliana (taxid:3702)]

 Score = 306 (112.8 bits), Expect = 2.8e-27, P = 2.8e-27
 Identities = 72/194 (37%), Positives = 121/194 (62%)

Query:    15 VAVISPQYCSPHPIDLAIVRKVMISSSGGFDVKDTNGNILFKVKDVFAFMHRRRVLLDGA 74
             ++V+S Q+C+P+P+DL + RKV   S   ++V D +GN+L ++       +R+RV+ D A
Sbjct:    16 ISVVSDQFCNPYPMDLLVKRKVQNFSKDYYEVFDPSGNLLLQIDGQAWGFNRKRVMRDPA 75

Query:    75 GNPIVTLREKAMSRHHRWQVFRGESTERRHLIFSAKRSRSGWFSSTTKLDVFLA--NNTR 132
             G  I+++R+K ++  ++W+V  GES ER  L+F+ ++S++   S  T +DVFL   NN +
Sbjct:    76 GFTILSMRQKGLALKNKWEVHGGESKEREDLLFTVQQSQA--VSLKTSVDVFLPENNNVK 133

Query:   133 E-DVCDFRVVEGSSWLFEPSSCTIYAGKSSAIVAQMHEKQTVKSIFLGKDNFMVTVHPNV 191
             + + CDF    G S +    S  ++  K+ A++A +    T  S   GK NF V V+P V
Sbjct:   134 KTNTCDFHASGGYSNI----SFKVF--KADALIAGVGF--TWGSFCKGKYNFKVRVNPEV 185

Query:   192 DYAFIVALIVILDE 205
             DYAFI+AL+V++D+
Sbjct:   186 DYAFIIALLVMVDD 199

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:4515103053 AT3G10986 "AT3G10986" [Arabidopsis thaliana (taxid:3702)]

 Score = 238 (88.8 bits), Expect = 4.4e-20, P = 4.4e-20
 Identities = 68/201 (33%), Positives = 110/201 (54%)

Query:    15 VAVISPQYCSPHPIDLAIVRKVMISSSGGFDVKDTNGNILFKVKDVFAFMHRRRVLLDGA 74
             V+V+   +C+P+  +L + R+        +DV D + N++F V      + R+RVL D A
Sbjct:     2 VSVVGEMFCNPYTTELVVRRRRESLKRERYDVFDLSNNLIFTVDGGIWNIRRKRVLRDAA 61

Query:    75 GNPIVTLREKAM-SRHHRWQVFRGESTERRHLIFSAKRSRSGWFSSTTKLDVFLA-NNTR 132
             G P++++R K +    + W+V++G+STE  +L+FSA+       S  T LDV L  + + 
Sbjct:    62 GIPLLSMRTKGLVPMRYNWEVYKGDSTESDNLLFSAREPNL--LSFKTSLDVTLPPDQSS 119

Query:   133 EDVC----DFRVVE---GSSW-LFEPSSCTIYAGKSSAIVAQMHEKQTVKSIFLGKDNFM 184
              D+     DF+      GSS+ LFEP   T+ A     +V   H+  T   +  G  +F 
Sbjct:   120 TDISSVEPDFQTFGRYIGSSFKLFEPIHNTLLA----EVV---HDF-TWGGLIKGSYSFK 171

Query:   185 VTVHPNVDYAFIVALIVILDE 205
             V V+P VD+AF+VAL+VI D+
Sbjct:   172 VRVNPYVDFAFVVALLVITDD 192

GO:0003674 "molecular_function" evidence=ND

GO:0005739 "mitochondrion" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2093242 AT3G15810 "AT3G15810" [Arabidopsis thaliana (taxid:3702)]

 Score = 204 (76.9 bits), Expect = 1.8e-16, P = 1.8e-16
 Identities = 56/194 (28%), Positives = 95/194 (48%)

Query:    17 VISPQYCSPHPIDLAIVRKVMISSSGGFDVKDTNGNILFKVKDVFAFMHRRR---VLLDG 73
             V+   Y       L + +  +  +  GF   D  G+I+F+V D +    R     VL+D 
Sbjct:    20 VVDKAYLYQEDKPLTVCKTSLFYTGDGFAAYDCRGDIIFRV-DSYGPDTRDNDEIVLMDA 78

Query:    74 AGNPIVTLREKAMSRHHRWQVFRGESTERRHLIFSAKRSRSGWFSSTTKLDVFLANNTRE 133
              G  ++T++ K  + H RW+ F GE +E +  IFS +RS S     T +++V+  + T E
Sbjct:    79 TGKCLLTVKRKRPTLHQRWEGFLGERSEGQKPIFSVRRS-SIIGRCTMEVEVY--DGTGE 135

Query:   134 DVCDFRVVEGSSWLFEPSSCTIYAGKSSAIVAQMHEKQTVKSIFLGKDNFMVTVHPNVDY 193
             +     +++G    F   SC IY  K   +     +     ++ LG+D F + + P  D 
Sbjct:   136 EY----IIDGD---FSQRSCLIYDTKKCTVAEIKRKVDASTNVMLGRDVFTLEIKPGFDG 188

Query:   194 AFIVALIVILDEIN 207
             AF + L+V+LD+IN
Sbjct:   189 AFAMGLVVVLDQIN 202

GO:0003674 "molecular_function" evidence=ND

GO:0005737 "cytoplasm" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2016299 AT1G80120 "AT1G80120" [Arabidopsis thaliana (taxid:3702)]

 Score = 196 (74.1 bits), Expect = 1.3e-15, P = 1.3e-15
 Identities = 57/180 (31%), Positives = 95/180 (52%)

Query:    33 VRKVMISSSG-GFDVKDTNGNILFKVKDVFAFMHRRR----VLLDGAGNPIVTLREKAMS 87
             VRK  +  +G GF V D  G+++F+V D +   + R     VL+D  G  ++TLR K  S
Sbjct:    21 VRKTSLFFAGDGFTVYDCKGSLVFRV-DSYGGPNTRDTDEVVLMDAHGRCLLTLRRKRPS 79

Query:    88 RHHRWQVFRGESTERRHLIFSAKRSRSGWFSSTTKLDVFLANNTREDVCDFRVVEGSSWL 147
                RW+ + GE ++ +  IF  +RS     +S T ++V+      +  C   ++EGS   
Sbjct:    80 LRRRWEGYLGERSDGQKPIFGVRRSSIIGRNSVT-VEVY-----GDYQCSEYLIEGS--- 130

Query:   148 FEPSSCTIYAGKSSAIVAQMHEKQTVKS-IFLGKDNFMVTVHPNVDYAFIVALIVILDEI 206
             F   +CT+   ++   VA++  K    + + LGKD F + V P  D AF + L+++LD+I
Sbjct:   131 FGARNCTVVEAETRRKVAEIRRKVDASTNVMLGKDVFSLNVKPGFDGAFAMGLVLVLDQI 190

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2180459 AT5G20640 "AT5G20640" [Arabidopsis thaliana (taxid:3702)]

 Score = 167 (63.8 bits), Expect = 1.5e-12, P = 1.5e-12
 Identities = 57/206 (27%), Positives = 102/206 (49%)

Query:    17 VISPQYCSPHPIDLAIVRKVMISSSGGFDVKDTNGNILFKVKDVFAFMHRRRVLL-DGAG 75
             V+S +Y S     L + R+  + + GGF V ++   ++F+V        + ++LL +G G
Sbjct:    12 VLSRRYSSESETVLVVRRRPPMVNGGGFVVSNSKQVVVFRVDGCGVLGTKGKLLLRNGDG 71

Query:    76 NPIVTLRE-----KAMSR-HHRWQVFR--GESTERRHLIFSAKRSRSGWFSSTTKLDVFL 127
             N ++ +R+     +A++  H++W+ F    E TER  L+F+ K  +       + + + +
Sbjct:    72 NDLLLIRKMGGIVQALNMVHNKWEGFGYDNEGTER--LVFTLKDPKDSCLVQNSSIKILV 129

Query:   128 ------ANNTREDVCDFRVVEGSSWLFEPSSCTIYAGKSSAIVAQMHEKQTVKSIFLGKD 181
                    ++TR +  +   ++GS   F   +C I      AI     EK+  + +   KD
Sbjct:   130 HGKPPKISSTRNNYVE---IKGS---FAERACNIMDSDGKAIAKVRIEKEMEEMVGNKKD 183

Query:   182 NFMVTVHPNVDYAFIVALIVILDEIN 207
              + V V PNVD +FIV LI ILD I+
Sbjct:   184 LYHVIVKPNVDQSFIVGLIAILDYIH 209

GO:0003674 "molecular_function" evidence=ND

TAIR|locus:2064179 AT2G38640 "AT2G38640" [Arabidopsis thaliana (taxid:3702)]

 Score = 157 (60.3 bits), Expect = 1.7e-11, P = 1.7e-11
 Identities = 51/182 (28%), Positives = 95/182 (52%)

Query:    30 LAIVRKVMISSSGGFDVKDTNGNILFKVKDVFAFMHRRRVLLDGAGNPIVTLREKAMSRH 89
             L + +K ++ +  GF V + NG ++F+V +         VL+D +G P++++R K +S  
Sbjct:    25 LTVWKKSLLFNCDGFTVYNANGELVFRVDNYMNCPRDNIVLMDASGFPLLSIRRKKLSLG 84

Query:    90 HRWQVFRGESTERRHLIFSAKRSRSGWFSSTTKLDVFLANNTREDVCDFRVVEGSSWLFE 149
               W V+ GE TER   IF+A+++ S    S  K   +++   ++ V     +EGS   + 
Sbjct:    85 DCWMVYDGE-TERDP-IFTARKNVS--IISNRKSLAWVS--AKKTV--LYEIEGS---YG 133

Query:   150 PSSCTIY-AGKSSAIVAQMHEKQTV-KSIFLGKDNFMVTVHPNVDYAFIVALIVILDEIN 207
               SC I    ++    A++  K+TV   +  GKD + + V   ++    +AL +ILD++ 
Sbjct:   134 QRSCKILDERRNKKKTAEIKRKETVIGGVAFGKDVYKLIVESEMEPRVAMALTIILDQMF 193

Query:   208 RA 209
             R+
Sbjct:   194 RS 195

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q9LZX1	LOR15_ARATH	No assigned EC number	0.5748	0.8515	0.8986	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	229
pfam04525	185	pfam04525, Tub_2, Tubby C 2	4e-53
COG4907	595	COG4907, COG4907, Predicted membrane protein [Func	0.002
COG4894	159	COG4894, COG4894, Uncharacterized conserved protei	0.002

>gnl|CDD|218129 pfam04525, Tub_2, Tubby C 2

 Score =  169 bits (429), Expect = 4e-53
 Identities = 79/192 (41%), Positives = 114/192 (59%), Gaps = 13/192 (6%)

Query: 16  AVISPQYCSPHPIDLAIVRKVMISSSGGFDVKDTNGNILFKVKDVFAFMHRRRVLLDGAG 75
            V+S +Y SP P DL + RK ++ +  GF V D+NGN++F+V      +   RVL+D +G
Sbjct: 2   VVVSSEYLSPEPEDLTVWRKSLVFNGDGFTVYDSNGNLVFRVDGYAFGLSDERVLMDSSG 61

Query: 76  NPIVTLREKAMSRHHRWQVFRGESTERRHLIFSAKRSRSGWFSSTTKLDVFLANNT---- 131
           NP++T+R K +S H RW+V+RGE TE +  +F+ +RS        T   VF   N+    
Sbjct: 62  NPLLTIRRKKLSLHDRWEVYRGEGTEGKDPLFTVRRSSI--VQLKTSSSVFSKRNSNVIV 119

Query: 132 -REDVCDFRVVEGSSWLFEPSSCTIYAGKSSAIVAQMHEKQTVKSIFLGKDNFMVTVHPN 190
             E  CDF  ++GS       SC IY   S  ++A++   QT K +FLGKD + VTV P 
Sbjct: 120 DDEKNCDFD-IKGSFL---DRSCKIYD-DSDKLIAEVKR-QTSKGVFLGKDVYTVTVKPE 173

Query: 191 VDYAFIVALIVI 202
           VDYAFI+AL+V+
Sbjct: 174 VDYAFIMALVVV 185

The structure of this family has been solved. It comprises a 12-stranded beta barrel with a central C-terminal alpha helix. This helix is thought to be a transmembrane helix. It is structurally similar to the C-terminal domain of the Tubby protein. In plants it plays a role in defense against pathogens. Length = 185

>gnl|CDD|227244 COG4907, COG4907, Predicted membrane protein [Function unknown]

 Score = 38.4 bits (89), Expect = 0.002
 Identities = 19/53 (35%), Positives = 27/53 (50%), Gaps = 11/53 (20%)

Query: 180 KDNFMVTVHPNVDYAFIVALIVILDEINRAHSS---SSSSGGGGGGGGGAGGG 229
           KD++    H N   +F        + +NRA+S+   S  S   GGGGG +GGG
Sbjct: 542 KDSYSPIFHNNYSRSF--------NNLNRAYSAIASSRRSSSSGGGGGFSGGG 586

Length = 595

>gnl|CDD|227231 COG4894, COG4894, Uncharacterized conserved protein [Function unknown]

 Score = 37.1 bits (86), Expect = 0.002
 Identities = 36/178 (20%), Positives = 74/178 (41%), Gaps = 33/178 (18%)

Query: 32  IVRKVMISSSGGFDVKDTNGNILFKVKDVFAFMHRRRVLLDGAGNPIVTLREKAMSRHHR 91
            +++ M S    F + D +G   FKV+  F  +     + D +G  +V++ +K +S   R
Sbjct: 9   FMKQKMFSFGDAFHIYDRDGEEAFKVEGSFFSIGDTLTITDASGKTLVSIEQKLLSLLPR 68

Query: 92  WQVFRGESTE---RRHLIFSAKRSRSGWFSSTTKLDVFLANNTREDVCDFRVVEGSSWLF 148
           +++  G  T    R+ + F             ++    +     E       + G+ W  
Sbjct: 69  YEISDGGGTVCEVRKKVTF-------------SRDKFEIDGLNWE-------IHGNIWDD 108

Query: 149 EPSSCTIYAGKSSAIVAQMHEKQTVKSIFLGKDNFMVTVHPNVDYAFIVALIVILDEI 206
           E     +  G++  + A++ +K      F  +D + + V P+ D   I+A+ V LD +
Sbjct: 109 E---FKLTDGEN--VRAEVSKK-----WFSWRDTYHLQVAPDEDALLIIAIAVALDMV 156

Length = 159

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	229
PF04525	187	Tub_2: Tubby C 2; InterPro: IPR007612 This is a fa	100.0
COG4894	159	Uncharacterized conserved protein [Function unknow	100.0
PF03803	221	Scramblase: Scramblase ; InterPro: IPR005552 Scram	99.66
COG4894	159	Uncharacterized conserved protein [Function unknow	98.61
KOG0621	292	consensus Phospholipid scramblase [Cell wall/membr	98.23
PF04525	187	Tub_2: Tubby C 2; InterPro: IPR007612 This is a fa	97.93
PF03803	221	Scramblase: Scramblase ; InterPro: IPR005552 Scram	96.11
COG4907	595	Predicted membrane protein [Function unknown]	89.79
COG4907	595	Predicted membrane protein [Function unknown]	84.55

>PF04525 Tub_2: Tubby C 2; InterPro: IPR007612 This is a family of plant and bacterial uncharacterised proteins

Probab=100.00  E-value=1.3e-43  Score=296.01  Aligned_cols=180  Identities=36%  Similarity=0.702  Sum_probs=110.5

Q ss_pred             EEecCCccCCCCeEEEEEEeeeeecCCCeEEEcCCCCEEEEEEe-cCCcccceEEEEcCCCCcEEEEEeccccccceEEE
Q 027044           16 AVISPQYCSPHPIDLAIVRKVMISSSGGFDVKDTNGNILFKVKD-VFAFMHRRRVLLDGAGNPIVTLREKAMSRHHRWQV   94 (229)
Q Consensus        16 ~vv~~~~~~~~~~~l~vk~k~~s~s~~~f~V~D~~G~~vf~V~g-~~~s~~~k~~l~D~~G~pL~~i~~k~~s~~~~w~v   94 (229)
                      +||.++||+++|++|+||+|.+++++++|+|+|++|+++|+|+| +.+++++++.|+|++|+||++|++|.++++++|++
T Consensus         2 ~vv~~~~~~~~~~~l~v~~k~~~~~~~~f~V~D~~G~~vf~V~g~~~~s~~~~~~l~D~~G~~L~~i~~k~~~l~~~w~i   81 (187)
T PF04525_consen    2 VVVDAQYCSPQPVTLTVKKKSLSFSGDDFTVYDENGNVVFRVDGGKFFSIGKKRTLMDASGNPLFTIRRKLFSLRPTWEI   81 (187)
T ss_dssp             -SS-GGGB-SS-EEEEEE----------EEEEETTS-EEEEEE--SCTTBTTEEEEE-TTS-EEEEEE--------EEEE
T ss_pred             cEECHHHcCCCceEEEEEEEEeeecCCCEEEEcCCCCEEEEEEEecccCCCCEEEEECCCCCEEEEEEeeecccceEEEE
Confidence            46799999999999999999999999999999999999999999 89999999999999999999999999999999999


Q ss_pred             EEcCCCcccceEEEEEecccccccCCceEEEEEcCCC-----CCceeeEEEeecCCcCcCCCeeEEEeCCCCceEEEEEe
Q 027044           95 FRGESTERRHLIFSAKRSRSGWFSSTTKLDVFLANNT-----REDVCDFRVVEGSSWLFEPSSCTIYAGKSSAIVAQMHE  169 (229)
Q Consensus        95 ~~g~~~~~~~~l~~vkk~~~~~~~~k~~~~v~~~~~~-----~~~~~~~~v~~G~~~~~~~~~~~I~~~~~g~~VA~V~r  169 (229)
                      |++++.+..+++|++|+++  .+..++++.+++....     .++.++|+| +| +|+  +++|+|++. +|++||+|+|
T Consensus        82 ~~~~~~~~~~~i~tvkk~~--~~~~~~~~~~f~~~~~~~~~~~~~~~~~~i-~G-~~~--~~~~~I~~~-~g~~VA~i~r  154 (187)
T PF04525_consen   82 YRGGGSEGKKPIFTVKKKS--MLQNKDSFDVFLPPKSNISIDDSEGPDFEI-KG-NFW--DRSFTIYDS-GGRVVAEISR  154 (187)
T ss_dssp             EETT---GGGEEEEEE------------EEEEET--T----------SEEE-ES--TT--TT--EEEEC-C--EEEEEEE
T ss_pred             EECCCCccCceEEEEEEec--ccCCCcceeEEEecccceeecCCCCceEEE-EE-Eec--CcEEEEEEc-CCCEEEEEec
Confidence            9999765567899999986  5677889999987432     246679999 99 999  999999953 3999999999


Q ss_pred             eeeeeeeeeeceeEEEEEeCCCCHHHHHHHHHH
Q 027044          170 KQTVKSIFLGKDNFMVTVHPNVDYAFIVALIVI  202 (229)
Q Consensus       170 k~~~~~~~~g~dtY~l~V~pgvD~ali~alvi~  202 (229)
                      |+..+.+++|+|+|.|+|+||+|++||||||||
T Consensus       155 k~~~k~~~~~~dty~l~V~pg~D~~lv~alvvi  187 (187)
T PF04525_consen  155 KYSSKKWFSGRDTYTLTVAPGVDQALVVALVVI  187 (187)
T ss_dssp             ----------B-SEEEEE-TTSBHHHHHHHHHH
T ss_pred             ccceeeEEecCcEEEEEEcCCCCHHHheeEEeC
Confidence            988778899999999999999999999999986

; PDB: 1ZXU_A 2Q4M_A.

>COG4894 Uncharacterized conserved protein [Function unknown]

Probab=100.00  E-value=9.3e-34  Score=222.81  Aligned_cols=154  Identities=21%  Similarity=0.366  Sum_probs=140.9

Q ss_pred             eEEEEEEeeeeecCCCeEEEcCCCCEEEEEEecCCcccceEEEEcCCCCcEEEEEeccccccceEEEEEcCCCcccceEE
Q 027044           28 IDLAIVRKVMISSSGGFDVKDTNGNILFKVKDVFAFMHRRRVLLDGAGNPIVTLREKAMSRHHRWQVFRGESTERRHLIF  107 (229)
Q Consensus        28 ~~l~vk~k~~s~s~~~f~V~D~~G~~vf~V~g~~~s~~~k~~l~D~~G~pL~~i~~k~~s~~~~w~v~~g~~~~~~~~l~  107 (229)
                      .+|.|+||+.++ +|+|.|+|.+|+.+|+|+|+.+++++.++|.|++|.+|.+|++|.++++|+|+|-+|+    +. +|
T Consensus         6 ~tl~mkQk~~~~-gd~f~I~d~dgE~af~VeGs~f~i~dtlti~Da~G~~l~~i~~kll~l~~~yeI~d~~----g~-~~   79 (159)
T COG4894           6 ITLFMKQKMFSF-GDAFHIYDRDGEEAFKVEGSFFSIGDTLTITDASGKTLVSIEQKLLSLLPRYEISDGG----GT-VC   79 (159)
T ss_pred             HhHhhhhhhhhc-ccceEEECCCCcEEEEEeeeEEeeCceEEEEecCCCChHHHHHHHhhccceeEEEcCC----CC-EE
Confidence            478999999999 8999999999999999999999999999999999999999999999999999999988    34 88


Q ss_pred             EEEecccccccCCceEEEEEcCCCCCceeeEEEeecCCcCcCCCeeEEEeCCCCceEEEEEeeeeeeeeeeeceeEEEEE
Q 027044          108 SAKRSRSGWFSSTTKLDVFLANNTREDVCDFRVVEGSSWLFEPSSCTIYAGKSSAIVAQMHEKQTVKSIFLGKDNFMVTV  187 (229)
Q Consensus       108 ~vkk~~~~~~~~k~~~~v~~~~~~~~~~~~~~v~~G~~~~~~~~~~~I~~~~~g~~VA~V~rk~~~~~~~~g~dtY~l~V  187 (229)
                      .++|+.   +++++++.+..        .+|++ +| |+|  +.+|++.++  ++++|+|+|||     ++|+|||.|+|
T Consensus        80 ~vrKK~---tf~Rdk~e~d~--------~~~ei-hG-Ni~--d~efkl~dg--~~~~aeVsKkw-----f~~rdTY~l~v  137 (159)
T COG4894          80 EVRKKV---TFSRDKFEIDG--------LNWEI-HG-NIW--DDEFKLTDG--ENVRAEVSKKW-----FSWRDTYHLQV  137 (159)
T ss_pred             EEEEEE---EEEeeeEEEcC--------CCeEE-ec-cee--ceEEEEecC--Cceehhheeee-----EeccceEEEEE
Confidence            888875   55677776643        35999 99 999  999999998  78999999998     78999999999


Q ss_pred             eCCCCHHHHHHHHHHHHhhhhc
Q 027044          188 HPNVDYAFIVALIVILDEINRA  209 (229)
Q Consensus       188 ~pgvD~ali~alvi~lD~~~~~  209 (229)
                      +|+.|..+|+++|||||+|.++
T Consensus       138 apde~a~lii~i~VaLD~v~~~  159 (159)
T COG4894         138 APDEDALLIIAIAVALDMVLYN  159 (159)
T ss_pred             cCchhhHHHHHHHHHHHHHhcC
Confidence            9999999999999999999763

>PF03803 Scramblase: Scramblase ; InterPro: IPR005552 Scramblase is palmitoylated and contains a potential protein kinase C phosphorylation site

Probab=99.66  E-value=2.5e-14  Score=121.93  Aligned_cols=168  Identities=18%  Similarity=0.254  Sum_probs=131.2

Q ss_pred             eEEEEEEeeeee-------cCCCeEEEcCCCCEEEEEEecCC---------cccceEEEEcCCCCcEEEEEecccc----
Q 027044           28 IDLAIVRKVMIS-------SSGGFDVKDTNGNILFKVKDVFA---------FMHRRRVLLDGAGNPIVTLREKAMS----   87 (229)
Q Consensus        28 ~~l~vk~k~~s~-------s~~~f~V~D~~G~~vf~V~g~~~---------s~~~k~~l~D~~G~pL~~i~~k~~s----   87 (229)
                      -.+.|+|+...+       ..+.|.|+|.+|+++|.+....-         ..+-++.|+|..|+++++|+|+.--    
T Consensus        22 ~~l~I~Q~~e~~e~~~~~e~~N~Y~I~n~~g~~i~~~~E~s~~~~R~~~~~~R~f~~~i~D~~g~~vl~i~Rp~~c~~C~  101 (221)
T PF03803_consen   22 DQLLIKQQIEPLEIFTGFETPNRYDIKNPNGQQIYYAVEESDCCSRQCCGSHRPFKMHIYDNYGREVLTIERPFKCCSCC  101 (221)
T ss_pred             CEEEEEEEEEEeceecccccCceEEEECCCCCEEEEEEEeCcceeeeecCCCCCEEEEEEecCCCEEEEEEcCCcceecc
Confidence            467777777653       35899999999999999876531         1234678999999999999986421    


Q ss_pred             --ccceEEEEEcCCCcccceEEEEEecccccccCCceEEEEEcCCCCCceeeEEEeecCCcC----cCCCeeEEEeCCCC
Q 027044           88 --RHHRWQVFRGESTERRHLIFSAKRSRSGWFSSTTKLDVFLANNTREDVCDFRVVEGSSWL----FEPSSCTIYAGKSS  161 (229)
Q Consensus        88 --~~~~w~v~~g~~~~~~~~l~~vkk~~~~~~~~k~~~~v~~~~~~~~~~~~~~v~~G~~~~----~~~~~~~I~~~~~g  161 (229)
                        ...+.+|+.+.    +.+|.+++++.   ..++++++|+.+++    ...+.| +| .+.    +.+++|+|++.. |
T Consensus       102 ~~~~~~~~V~~p~----g~~iG~I~q~~---~~~~~~f~I~d~~~----~~~~~I-~g-p~~~~~~~~~~~F~I~~~~-~  167 (221)
T PF03803_consen  102 PCCLQEMEVESPP----GNLIGSIRQPF---SCCRPNFDIFDANG----NPIFTI-KG-PCCCCSCCCDWEFEIKDPN-G  167 (221)
T ss_pred             cccceeEEEecCC----CcEEEEEEEcC---cccceEEEEEECCC----ceEEEE-eC-Ccceeccccceeeeeeccc-C
Confidence              13567776655    58899999764   66899999987664    357899 88 522    128999999953 6


Q ss_pred             ceEEEEEeeee--eeeeeeeceeEEEEEeCCCCH---HHHHHHHHHHHhhhhc
Q 027044          162 AIVAQMHEKQT--VKSIFLGKDNFMVTVHPNVDY---AFIVALIVILDEINRA  209 (229)
Q Consensus       162 ~~VA~V~rk~~--~~~~~~g~dtY~l~V~pgvD~---ali~alvi~lD~~~~~  209 (229)
                      +.||+|+|+|.  .++.+...|+|.|+..+..|.   |+++|.++.||.++-+
T Consensus       168 ~~vg~I~k~w~G~~~e~~t~~d~f~i~Fp~~l~~~~Kalll~a~~liD~~~Fe  220 (221)
T PF03803_consen  168 QEVGSITKKWSGFCRELFTDADNFVIEFPPDLDVEQKALLLGAAFLIDYMYFE  220 (221)
T ss_pred             cEEEEEEEecCCcchhhccccceEEEEcCCCCCHHHHHHHHHHHHHhhhhhhc
Confidence            99999999997  345788899999999999886   5899999999998754

Scramblase exhibits Ca2+-activated phospholipid scrambling activity in vitro. There are also possible SH3 and WW binding motifs. Scramblase is involved in the redistribution of phospholipids after cell activation or injury [].

>COG4894 Uncharacterized conserved protein [Function unknown]

Probab=98.61  E-value=1.1e-07  Score=75.68  Aligned_cols=103  Identities=15%  Similarity=0.279  Sum_probs=82.2

Q ss_pred             ccCCCCeEEEEEEeeeeecCCCeEEEcCCCCEEEEEEecCCcccceEEEEcCCCCcEEEEEeccccccceEEEEEcC---
Q 027044           22 YCSPHPIDLAIVRKVMISSSGGFDVKDTNGNILFKVKDVFAFMHRRRVLLDGAGNPIVTLREKAMSRHHRWQVFRGE---   98 (229)
Q Consensus        22 ~~~~~~~~l~vk~k~~s~s~~~f~V~D~~G~~vf~V~g~~~s~~~k~~l~D~~G~pL~~i~~k~~s~~~~w~v~~g~---   98 (229)
                      |-...+..+.|+-+.++. +|.|+|+|+.|.+++.++.+..++..+..|-|++|+ ++.+++|...++++|++-.-+   
T Consensus        24 ~d~dgE~af~VeGs~f~i-~dtlti~Da~G~~l~~i~~kll~l~~~yeI~d~~g~-~~~vrKK~tf~Rdk~e~d~~~~ei  101 (159)
T COG4894          24 YDRDGEEAFKVEGSFFSI-GDTLTITDASGKTLVSIEQKLLSLLPRYEISDGGGT-VCEVRKKVTFSRDKFEIDGLNWEI  101 (159)
T ss_pred             ECCCCcEEEEEeeeEEee-CceEEEEecCCCChHHHHHHHhhccceeEEEcCCCC-EEEEEEEEEEEeeeEEEcCCCeEE
Confidence            446789999999999999 889999999999999999999999999999999999 888999887778888873211   


Q ss_pred             -C---------CcccceEEEEEecccccccCCceEEEEEcC
Q 027044           99 -S---------TERRHLIFSAKRSRSGWFSSTTKLDVFLAN  129 (229)
Q Consensus        99 -~---------~~~~~~l~~vkk~~~~~~~~k~~~~v~~~~  129 (229)
                       +         .+.++..++++|+   |+.++..+.+.++.
T Consensus       102 hGNi~d~efkl~dg~~~~aeVsKk---wf~~rdTY~l~vap  139 (159)
T COG4894         102 HGNIWDDEFKLTDGENVRAEVSKK---WFSWRDTYHLQVAP  139 (159)
T ss_pred             ecceeceEEEEecCCceehhheee---eEeccceEEEEEcC
Confidence             0         1123456677654   56677777777654

>KOG0621 consensus Phospholipid scramblase [Cell wall/membrane/envelope biogenesis]

Probab=98.23  E-value=3e-05  Score=69.04  Aligned_cols=161  Identities=15%  Similarity=0.210  Sum_probs=108.3

Q ss_pred             cCCCeEEEcCCCCEEEEEEecCC---------cccceEEEEcCCCCcEEEEEeccccccc--------eEEEEEcCCCcc
Q 027044           40 SSGGFDVKDTNGNILFKVKDVFA---------FMHRRRVLLDGAGNPIVTLREKAMSRHH--------RWQVFRGESTER  102 (229)
Q Consensus        40 s~~~f~V~D~~G~~vf~V~g~~~---------s~~~k~~l~D~~G~pL~~i~~k~~s~~~--------~w~v~~g~~~~~  102 (229)
                      +.+.|.|.|.+|+.+|.+-...-         .-+-...|+|.-|+++++++|++.-...        ..++-.+    .
T Consensus        97 t~NRY~v~~~~g~~v~~~~E~S~~~~Rq~~g~~RpF~~~i~D~~g~eVl~~~R~~~c~~~~c~~~~~~~~~v~~p----~  172 (292)
T KOG0621|consen   97 TANRYVVHDMYGQPLYYAMERSNVFARQYLGTHRPFAMRIMDNFGQEVLTCKRPFPCCSSACALCLAQEIEIQSP----P  172 (292)
T ss_pred             cCcEEEEEcCCcChhHHHHhhchHHHHHhhccCCcceeEeecccCcEEEEEeccccccccccccccccEEEEEcC----C
Confidence            58899999999999986554321         1244788999999999999997533221        1112111    1


Q ss_pred             cceEEEEEecccccccCCceEEEEEcCCCCCceeeEEEeecCCcC----cCCCeeEEEeCCCCceEEEEEeeee--eeee
Q 027044          103 RHLIFSAKRSRSGWFSSTTKLDVFLANNTREDVCDFRVVEGSSWL----FEPSSCTIYAGKSSAIVAQMHEKQT--VKSI  176 (229)
Q Consensus       103 ~~~l~~vkk~~~~~~~~k~~~~v~~~~~~~~~~~~~~v~~G~~~~----~~~~~~~I~~~~~g~~VA~V~rk~~--~~~~  176 (229)
                      .-.+-.+.+.   +..+.++++|.-..    ....+.| +|..++    +++..|.|...+.++.|++|.|+|.  ..+.
T Consensus       173 ~~~lG~v~q~---~~~~~~~f~i~~~~----~~~v~~v-~gp~~~~~~~~~d~~f~~~~~d~~~~vg~I~k~w~g~~rE~  244 (292)
T KOG0621|consen  173 MGLLGKVLQT---WGCVNPNFHLWDRD----GNLVFLV-EGPRCCTFACCDDTVFFPKTTDNGRIVGSISRKWAGLVREA  244 (292)
T ss_pred             CceEEEEEEe---eccccceEEEEccc----ceeEEEE-EcCceeEEEeecCcceeEEEcCCCeEEEEEeecccchhhhh
Confidence            2334444433   23456777775422    1234666 662121    1155566665555899999999997  4578


Q ss_pred             eeeceeEEEEEeCCCCH---HHHHHHHHHHHhhhhccCC
Q 027044          177 FLGKDNFMVTVHPNVDY---AFIVALIVILDEINRAHSS  212 (229)
Q Consensus       177 ~~g~dtY~l~V~pgvD~---ali~alvi~lD~~~~~~~~  212 (229)
                      +.+.|+|.|.-.-..|.   ++++|.+.-||.+.-+.+.
T Consensus       245 fTDad~f~v~FPldLdvk~kavllga~flID~~~Fe~~~  283 (292)
T KOG0621|consen  245 FTDADTFVVHFPLDLDVKLKALLLGSTFLIDYMSFESRG  283 (292)
T ss_pred             eeccceeeEecCCcCCHHHHhhhhhheeeEEEEEEecCC
Confidence            89999999998887776   5799999999999888875

>PF04525 Tub_2: Tubby C 2; InterPro: IPR007612 This is a family of plant and bacterial uncharacterised proteins

Probab=97.93  E-value=7.6e-05  Score=62.15  Aligned_cols=86  Identities=16%  Similarity=0.236  Sum_probs=52.2

Q ss_pred             CCCEEEEEEecCC-cccceEEEEcCCCCcEEEEEe-ccccccceEEEEEcCCCcccceEEEEEecccccccCCceEEEEE
Q 027044           50 NGNILFKVKDVFA-FMHRRRVLLDGAGNPIVTLRE-KAMSRHHRWQVFRGESTERRHLIFSAKRSRSGWFSSTTKLDVFL  127 (229)
Q Consensus        50 ~G~~vf~V~g~~~-s~~~k~~l~D~~G~pL~~i~~-k~~s~~~~w~v~~g~~~~~~~~l~~vkk~~~~~~~~k~~~~v~~  127 (229)
                      .....++|.-+.+ ..++...|+|.+|+++|++.. +.+++..+..++++.    +++|++++++.   +.++++++++.
T Consensus        11 ~~~~~l~v~~k~~~~~~~~f~V~D~~G~~vf~V~g~~~~s~~~~~~l~D~~----G~~L~~i~~k~---~~l~~~w~i~~   83 (187)
T PF04525_consen   11 PQPVTLTVKKKSLSFSGDDFTVYDENGNVVFRVDGGKFFSIGKKRTLMDAS----GNPLFTIRRKL---FSLRPTWEIYR   83 (187)
T ss_dssp             SS-EEEEEE----------EEEEETTS-EEEEEE--SCTTBTTEEEEE-TT----S-EEEEEE-----------EEEEEE
T ss_pred             CCceEEEEEEEEeeecCCCEEEEcCCCCEEEEEEEecccCCCCEEEEECCC----CCEEEEEEeee---cccceEEEEEE
Confidence            4667888855554 457899999999999999999 899999999999976    58999999864   66889999998


Q ss_pred             cCCCCCceeeEEEeec
Q 027044          128 ANNTREDVCDFRVVEG  143 (229)
Q Consensus       128 ~~~~~~~~~~~~v~~G  143 (229)
                      .+..+++.+-++| +-
T Consensus        84 ~~~~~~~~~i~tv-kk   98 (187)
T PF04525_consen   84 GGGSEGKKPIFTV-KK   98 (187)
T ss_dssp             TT---GGGEEEEE-E-
T ss_pred             CCCCccCceEEEE-EE
Confidence            8765444567888 44

; PDB: 1ZXU_A 2Q4M_A.

>PF03803 Scramblase: Scramblase ; InterPro: IPR005552 Scramblase is palmitoylated and contains a potential protein kinase C phosphorylation site

Probab=96.11  E-value=0.067  Score=45.33  Aligned_cols=66  Identities=17%  Similarity=0.280  Sum_probs=50.6

Q ss_pred             eEEEcCCCCEEEEEEecCCc------ccceEEEEcCCCCcEEEEEeccccccceEEEEEcCCCcccceEEEEEecc
Q 027044           44 FDVKDTNGNILFKVKDVFAF------MHRRRVLLDGAGNPIVTLREKAMSRHHRWQVFRGESTERRHLIFSAKRSR  113 (229)
Q Consensus        44 f~V~D~~G~~vf~V~g~~~s------~~~k~~l~D~~G~pL~~i~~k~~s~~~~w~v~~g~~~~~~~~l~~vkk~~  113 (229)
                      ..|+|.+|+.+++++-...-      ...+..+.+++|++|.+|+++...+.++|+|++.+    ++++++++-..
T Consensus        78 ~~i~D~~g~~vl~i~Rp~~c~~C~~~~~~~~~V~~p~g~~iG~I~q~~~~~~~~f~I~d~~----~~~~~~I~gp~  149 (221)
T PF03803_consen   78 MHIYDNYGREVLTIERPFKCCSCCPCCLQEMEVESPPGNLIGSIRQPFSCCRPNFDIFDAN----GNPIFTIKGPC  149 (221)
T ss_pred             EEEEecCCCEEEEEEcCCcceecccccceeEEEecCCCcEEEEEEEcCcccceEEEEEECC----CceEEEEeCCc
Confidence            36789999999998865321      23577788899999999998766678889999887    36788887653

Scramblase exhibits Ca2+-activated phospholipid scrambling activity in vitro. There are also possible SH3 and WW binding motifs. Scramblase is involved in the redistribution of phospholipids after cell activation or injury [].

>COG4907 Predicted membrane protein [Function unknown]

Probab=89.79  E-value=0.21  Score=47.16  Aligned_cols=18  Identities=11%  Similarity=0.038  Sum_probs=7.7

Q ss_pred             eeceeEEEEEeCCCCHHH
Q 027044          178 LGKDNFMVTVHPNVDYAF  195 (229)
Q Consensus       178 ~g~dtY~l~V~pgvD~al  195 (229)
                      .|.+=+.-..+=||-.-.
T Consensus       511 ~W~~ylVYatALGV~dkV  528 (595)
T COG4907         511 LWEQYLVYATALGVSDKV  528 (595)
T ss_pred             hHhhhhhhhhhhccHHHH
Confidence            344433333455554433

>COG4907 Predicted membrane protein [Function unknown]

Probab=84.55  E-value=0.59  Score=44.25  Aligned_cols=11  Identities=36%  Similarity=0.579  Sum_probs=4.5

Q ss_pred             ceeEEEEEeCC
Q 027044          180 KDNFMVTVHPN  190 (229)
Q Consensus       180 ~dtY~l~V~pg  190 (229)
                      +|+|..-+.-.
T Consensus       542 kds~~~i~h~n  552 (595)
T COG4907         542 KDSYSPIFHNN  552 (595)
T ss_pred             cccceeEEecc
Confidence            33444444433

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	229
1zxu_A	217	X-Ray Structure Of Protein From Arabidopsis Thalian		1e-61

>pdb|1ZXU|A Chain A, X-Ray Structure Of Protein From Arabidopsis Thaliana At5g01750 Length = 217

Iteration: 1
 Score =  232 bits (591), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 117/207 (56%), Positives = 145/207 (70%), Gaps = 12/207 (5%)
Query: 2   AQQPSFGGAAANPVAVISPQYCSPHPIDLAIVRKVMISSSGGFDVKDTNGNILFKVKDVF 61
           A  P  GG       V+ P+YC+P+PID AIVRK    + G F + D NGN+LFKVK+  
Sbjct: 18  APTPQAGGV------VVDPKYCAPYPIDXAIVRKXXSLTDGNFVITDVNGNLLFKVKEPV 71
Query: 62  AFMHRRRVLLDGAGNPIVTLREKAMSRHHRWQVFRGESTERRHLIFSAKRSRSGWFSSTT 121
             +H +RVLLDG+G P+VTLREK +S H RWQVFRG ST++R L+++ KRS        T
Sbjct: 72  FGLHDKRVLLDGSGTPVVTLREKXVSXHDRWQVFRGGSTDQRDLLYTVKRSSX--LQLKT 129
Query: 122 KLDVFLANNTREDVCDFRVVEGSSWLFEPSSCTIYAGKSSAIVAQMHEKQTVKSIFLGKD 181
           KLDVFL +N  E  CDFRV    SWL    SC +YAG+S AIVAQ H K TV+S+FLGKD
Sbjct: 130 KLDVFLGHNKDEKRCDFRV--KGSWL--ERSCVVYAGESDAIVAQXHRKHTVQSVFLGKD 185
Query: 182 NFMVTVHPNVDYAFIVALIVILDEINR 208
           NF VTV+PNVDYAFI +L+VILD++NR
Sbjct: 186 NFSVTVYPNVDYAFIASLVVILDDVNR 212

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	229
1zxu_A	217	AT5G01750 protein; PFAM PF01167, TULP, structural	100.0
1zxu_A	217	AT5G01750 protein; PFAM PF01167, TULP, structural	98.19
3u88_M	75	Histone-lysine N-methyltransferase MLL; menin, MEN	82.4
2lqh_B	52	Forkhead box O3, FOXO3A; promiscuous binding, intr	83.02

>1zxu_A AT5G01750 protein; PFAM PF01167, TULP, structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG; 1.70A {Arabidopsis thaliana} SCOP: d.23.1.2 PDB: 2q4m_A

Probab=100.00  E-value=3.6e-45  Score=310.62  Aligned_cols=202  Identities=58%  Similarity=0.982  Sum_probs=152.4

Q ss_pred             CCCCCCCCCceEEecCCccCCCCeEEEEEEeeeeecCCCeEEEcCCCCEEEEEEecCCcccceEEEEcCCCCcEEEEEec
Q 027044            5 PSFGGAAANPVAVISPQYCSPHPIDLAIVRKVMISSSGGFDVKDTNGNILFKVKDVFAFMHRRRVLLDGAGNPIVTLREK   84 (229)
Q Consensus         5 ~~~~~~~~~p~~vv~~~~~~~~~~~l~vk~k~~s~s~~~f~V~D~~G~~vf~V~g~~~s~~~k~~l~D~~G~pL~~i~~k   84 (229)
                      |+-=-++++|++||.++||++++++|+||||+++|++++|+|+|++|+++|+|+++.++++.++.|+|++|+||++|++|
T Consensus        15 ~~~~~~~~~~~~vv~~~~~~~~~~~l~vkqk~~~~~~~~f~V~D~~G~~vf~V~~~~~~~~~~~~l~D~~G~~l~~i~rk   94 (217)
T 1zxu_A           15 PSGAPTPQAGGVVVDPKYCAPYPIDMAIVRKMMSLTDGNFVITDVNGNLLFKVKEPVFGLHDKRVLLDGSGTPVVTLREK   94 (217)
T ss_dssp             ---------CCCSSCGGGBCSSCEEEEEECC-----CCCEEEEETTSCEEEEEECSSTTCCSEEEEECTTSCEEEEEEC-
T ss_pred             CCCCCCCCCcEEEECccccCCCCcEEEEEEEEeEeeCCCEEEEeCCCCEEEEEEccccCCCCEEEEECCCCCEEEEEEcc
Confidence            44445678999999999999999999999999999888999999999999999999999999999999999999999999


Q ss_pred             cccccceEEEEEcCCCcccceEEEEEecccccccCCceEEEEEcCCCCCceeeEEEeecCCcCcCCCeeEEEeCCCCceE
Q 027044           85 AMSRHHRWQVFRGESTERRHLIFSAKRSRSGWFSSTTKLDVFLANNTREDVCDFRVVEGSSWLFEPSSCTIYAGKSSAIV  164 (229)
Q Consensus        85 ~~s~~~~w~v~~g~~~~~~~~l~~vkk~~~~~~~~k~~~~v~~~~~~~~~~~~~~v~~G~~~~~~~~~~~I~~~~~g~~V  164 (229)
                      .++++++|+||+++..+.+++++++|+++  ++.++++++|++.++..++.+.|+| +| +|+  +++|+|+++.++++|
T Consensus        95 ~~~~~~~~~v~~~~~~~~~~~i~~vrk~~--~~~~~~~~~V~~~~~~~~~~~~~~I-~G-~~~--~~~f~I~~~~~~~~V  168 (217)
T 1zxu_A           95 MVSMHDRWQVFRGGSTDQRDLLYTVKRSS--MLQLKTKLDVFLGHNKDEKRCDFRV-KG-SWL--ERSCVVYAGESDAIV  168 (217)
T ss_dssp             -----CEEEEEETTCCCGGGEEEEEEC---------CCEEEEETTCCC-CCCSEEE-ES-CTT--TTCCEEEETTTCCEE
T ss_pred             ccccCcEEEEEcCCCCCCCcEEEEEEEec--cccCCCeEEEEECCCCCCCceEEEE-EE-eEe--CCEEEEEECCCCEEE
Confidence            99999999999998654456899999874  3447899999998765555679999 99 999  999999998557999


Q ss_pred             EEEEeeeeeeeeeeeceeEEEEEeCCCCHHHHHHHHHHHHhhhhccCC
Q 027044          165 AQMHEKQTVKSIFLGKDNFMVTVHPNVDYAFIVALIVILDEINRAHSS  212 (229)
Q Consensus       165 A~V~rk~~~~~~~~g~dtY~l~V~pgvD~ali~alvi~lD~~~~~~~~  212 (229)
                      |+|+|||+++++++++|+|.|+|.|++|.+|+||+|++||+|+++++.
T Consensus       169 a~I~kk~~~~~~~~~~D~y~l~V~p~~D~aliialvv~iD~~~~~~~~  216 (217)
T 1zxu_A          169 AQMHRKHTVQSVFLGKDNFSVTVYPNVDYAFIASLVVILDDVNREDRA  216 (217)
T ss_dssp             EEEEEC--------CBCSEEEEECTTSBHHHHHHHHHHHHHHHC----
T ss_pred             EEEEeeeeccccccCCcEEEEEECCCCCHHHHHHHHHHHHHhhhhccC
Confidence            999999988888999999999999999999999999999999998764

>1zxu_A AT5G01750 protein; PFAM PF01167, TULP, structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG; 1.70A {Arabidopsis thaliana} SCOP: d.23.1.2 PDB: 2q4m_A

Probab=98.19  E-value=7.7e-06  Score=68.45  Aligned_cols=99  Identities=15%  Similarity=0.215  Sum_probs=69.4

Q ss_pred             CCCCeEEEEEEeeeeecCCCeEEEcCCCCEEEEEEecCCcccceEEEEcCCCC----cEEEEEec-cccccceEEEEEcC
Q 027044           24 SPHPIDLAIVRKVMISSSGGFDVKDTNGNILFKVKDVFAFMHRRRVLLDGAGN----PIVTLREK-AMSRHHRWQVFRGE   98 (229)
Q Consensus        24 ~~~~~~l~vk~k~~s~s~~~f~V~D~~G~~vf~V~g~~~s~~~k~~l~D~~G~----pL~~i~~k-~~s~~~~w~v~~g~   98 (229)
                      ...+..|+++.+.+++ ++.+.|+|.+|++|+++.-+.+++..+..++++++.    ||++|+++ .+++++.|+|+.++
T Consensus        59 ~~G~~vf~V~~~~~~~-~~~~~l~D~~G~~l~~i~rk~~~~~~~~~v~~~~~~~~~~~i~~vrk~~~~~~~~~~~V~~~~  137 (217)
T 1zxu_A           59 VNGNLLFKVKEPVFGL-HDKRVLLDGSGTPVVTLREKMVSMHDRWQVFRGGSTDQRDLLYTVKRSSMLQLKTKLDVFLGH  137 (217)
T ss_dssp             TTSCEEEEEECSSTTC-CSEEEEECTTSCEEEEEEC------CEEEEEETTCCCGGGEEEEEEC-------CCEEEEETT
T ss_pred             CCCCEEEEEEccccCC-CCEEEEECCCCCEEEEEEccccccCcEEEEEcCCCCCCCcEEEEEEEeccccCCCeEEEEECC
Confidence            3578899999987777 779999999999999999999999999999998865    79999997 25689999999876


Q ss_pred             CCcccceEEEEEecccccccCCceEEEEEc
Q 027044           99 STERRHLIFSAKRSRSGWFSSTTKLDVFLA  128 (229)
Q Consensus        99 ~~~~~~~l~~vkk~~~~~~~~k~~~~v~~~  128 (229)
                      ...++.+.++++-.     .+..+++|+..
T Consensus       138 ~~~~~~~~~~I~G~-----~~~~~f~I~~~  162 (217)
T 1zxu_A          138 NKDEKRCDFRVKGS-----WLERSCVVYAG  162 (217)
T ss_dssp             CCC-CCCSEEEESC-----TTTTCCEEEET
T ss_pred             CCCCCceEEEEEEe-----EeCCEEEEEEC
Confidence            43233456777643     24677888765

>3u88_M Histone-lysine N-methyltransferase MLL; menin, MEN1, MLL, JUND, ledgf, TPR, transcription; HET: CHD 0BR GGB; 3.00A {Homo sapiens}

Probab=82.40  E-value=0.67  Score=31.11  Aligned_cols=34  Identities=24%  Similarity=0.216  Sum_probs=21.5

Q ss_pred             EEEeCCCCHHHHHHHHHHHHhhhhccCCCCCCCC
Q 027044          185 VTVHPNVDYAFIVALIVILDEINRAHSSSSSSGG  218 (229)
Q Consensus       185 l~V~pgvD~ali~alvi~lD~~~~~~~~~~~s~~  218 (229)
                      |-|.||.|.+|.+..+|--..-+-.+-...||||
T Consensus        28 lgvgpGFDAALqvSa~Ig~nl~kfrdv~Ges~g~   61 (75)
T 3u88_M           28 LRVGPGFDAALQVSAAIGTNLRRFRAVFGESGGG   61 (75)
T ss_dssp             CEECCCCCHHHHHHHHHHHHHHHHHHHHCC----
T ss_pred             HccCcChhHHHHHHHHHHHHHHHHHHHhcccCCC
Confidence            4689999999988877766655544444444433

>2lqh_B Forkhead box O3, FOXO3A; promiscuous binding, intrinsic disorder, transcription; NMR {Homo sapiens} PDB: 2lqi_B

Probab=83.02  E-value=0.26  Score=30.45  Aligned_cols=19  Identities=58%  Similarity=1.059  Sum_probs=9.5

Q ss_pred             ccCCCCCCCCCCCCCCCCC
Q 027044          209 AHSSSSSSGGGGGGGGGAG  227 (229)
Q Consensus       209 ~~~~~~~s~~~~~~~~~~~  227 (229)
                      .+.-+|+-|||.|||.|||
T Consensus        17 sdslshsdgggsgggsggg   35 (52)
T 2lqh_B           17 SDSLSHSDGGGSGGGSGGG   35 (52)
Confidence            3344466555555554443

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	229
d2q4ma1	189	d.23.1.2 (A:24-212) Hypothetical protein At5g01750	3e-64

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	229
d2q4ma1	189	Hypothetical protein At5g01750 {Thale cress (Arabi	100.0
d2q4ma1	189	Hypothetical protein At5g01750 {Thale cress (Arabi	98.17