Citrus Sinensis ID: 027077

---

Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------23
Protein Sequence
MSNDTVDKLVIFLAKRDGIDKLVKTFQYVSKLVHWHVEATKPELAQRFKQWEVASGLSRKAFRTGRFLTGFNLLRRNPGATPTLRLLAVLANAGEMVYWSFDHLLWLSRIGTLDAKFARRLSFISAFGESFGYVFFIIADFILMKQGLAKERQLVAPDHEEKSKDVEESLRKIKVDRVMRLMAVAANVADLIIALADIEPNPFCNHVVTLGISGLVSAWSGWYRNWPS
Secondary Structure (PSIPRED)
ccHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHccc
Secondary Structure Prediction (SSPRO)
cccHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccEEHHHHHHHHHHHHHHcccc
Coil and Loop (DISEMBL)
MSNDTVDKLVIFLAKRDGIDKLVKTFQYVSKLVHWHVEATKPELAQRFKQWEVAsglsrkafrtgrfltgfnllrrnpgatpTLRLLAVLANAGEMVYWSFDHLLWLSRIGTLDAKFARRLSFISAFGESFGYVFFIIADFILMKQGLAKerqlvapdheeksKDVEESLRKIKVDRVMRLMAVAANVADLIIALadiepnpfcnhVVTLGISGLVSAwsgwyrnwps
Flexible Loop (DISEMBL)
MSNDTVDKLVIFlakrdgidkLVKTFQYVSKLVHWHVEATKPELAQRFKQWEVasglsrkafrtgrfltgfnllrrnpgatPTLRLLAVLANAGEMVYWSFDHLLWLSRIGTLDAKFARRLSFISAFGESFGYVFFIIADFILMKQGLAKERQlvapdheekskdveeslrkikvdRVMRLMAVAANVADLIIALADIEPNPFCNHVVTLGISGLvsawsgwyrnwps
Low Complexity Region (SEG)
MSNDTVDKLVIFLAKRDGIDKLVKTFQYVSKLVHWHVEATKPELAQRFKQWEVASGLSRKAFRTGRFLTGFNLLRRNPGATPTLRLLAVLANAGEMVYWSFDHLLWLSRIGTLDAKFARRLSFISAFGESFGYVFFIIADFILMKQGLAKERQLVAPDHEEKSKDVEESLRKIKVDRVMRLMAVAANVADLIIALADIEPNPFCNHVVTLGISGLVSAWSGWYRNWPS
Disordered region (IsUnstruct)
*****VDKLVIFLAKRDGIDKLVKTFQYVSKLVHWHVEATKPELAQRFKQWEVASGLSRKAFRTGRFLTGFNLLRRNPGATPTLRLLAVLANAGEMVYWSFDHLLWLSRIGTLDAKFARRLSFISAFGESFGYVFFIIADFILMKQGLA**********************KIKVDRVMRLMAVAANVADLIIALADIEPNPFCNHVVTLGISGLVSAWSGWYRNW**
Disordered Region (DISOPRED)
**NDTVDKLVIFLAKRDGIDKLVKTFQYVSKLVHWHVEATKPELAQRFKQWEVASGLSRKAFRTGRFLTGFNLLRRNPGATPTLRLLAVLANAGEMVYWSFDHLLWLSRIGTLDAKFARRLSFISAFGESFGYVFFIIADFILMKQG*************************IKVDRVMRLMAVAANVADLIIALADIEPNPFCNHVVTLGISGLVSAWSGWYRNWPS
Disordered Region (DISEMBL)
MSNDTVDKLVIFLAKRDGIDKLVKTFQYVSKLVHWHVEATKPELAQRFKQWEVASGLSRKAFRTGRFLTGFNLLRRNPGATPTLRLLAVLANAGEMVYWSFDHLLWLSRIGTLDAKFARRLSFISAFGESFGYVFFIIADFILMKQGLAKERQLV*************SLRKIKVDRVMRLMAVAANVADLIIALADIEPNPFCNHVVTLGISGLVSAWSGWYRNWPS
Disordered Region (DISPRO)
*SNDTVDKLVIFLAKRDGIDKLVKTFQYVSKLVHWHVEATKPELAQRFKQWEVASGLSRKAFRTGRFLTGFNLLRRNPGATPTLRLLAVLANAGEMVYWSFDHLLWLSRIGTLDAKFARRLSFISAFGESFGYVFFIIADFILMKQGLAKERQLVAPDHEEKSKDVEESLRKIKVDRVMRLMAVAANVADLIIALADIEPNPFCNHVVTLGISGLVSAWSGWYRNWPS
Transmembrane Helix (TMHMM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooHHHHHHHHHHHHHHHHHiiiii
Transmembrane Helix (MEMSAT)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooHHHHHHHHHHHHHHHHHHHiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHiiiii
TM Helix, Signal Peptide (Phobius)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MSNDTVDKLVIFLAKRDGIDKLVKTFQYVSKLVHWHVEATKPELAQRFKQWEVASGLSRKAFRTGRFLTGFNLLRRNPGATPTLRLLAVLANAGEMVYWSFDHLLWLSRIGTLDAKFARRLSFISAFGESFGYVFFIIADFILMKQGLAKERQLVAPDHEEKSKDVEESLRKIKVDRVMRLMAVAANVADLIIALADIEPNPFCNHVVTLGISGLVSAWSGWYRNWPS
Positional Conservation
no confident homologs detected

---

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	228	2.2.26 [Sep-21-2011]
Q9STY0	227	Peroxisomal membrane prot	yes	no	0.995	1.0	0.723	1e-89
Q7XU74	222	Peroxisomal membrane prot	yes	no	0.964	0.990	0.696	2e-88
Q01IH3	222	Peroxisomal membrane prot	N/A	no	0.964	0.990	0.696	2e-88
Q10MN2	242	Peroxisomal membrane prot	no	no	0.916	0.863	0.311	1e-22
A2XFQ8	242	Peroxisomal membrane prot	N/A	no	0.916	0.863	0.311	1e-22
Q9FZF1	248	Peroxisomal membrane prot	no	no	0.973	0.895	0.297	7e-18
Q54H86	254	Peroxisomal membrane prot	yes	no	0.951	0.854	0.294	6e-15
Q10MN3	254	Peroxisomal membrane prot	no	no	0.964	0.866	0.265	6e-13
Q5VRJ8	233	Peroxisomal membrane prot	no	no	0.912	0.892	0.237	3e-06
Q84JW1	231	Peroxisomal membrane prot	no	no	0.894	0.883	0.251	2e-05

>sp|Q9STY0|PX11B_ARATH Peroxisomal membrane protein 11B OS=Arabidopsis thaliana GN=PEX11B PE=1 SV=1

 Score =  328 bits (842), Expect = 1e-89,   Method: Compositional matrix adjust.
 Identities = 165/228 (72%), Positives = 192/228 (84%), Gaps = 1/228 (0%)

Query: 1   MSNDTVDKLVIFLAKRDGIDKLVKTFQYVSKLVHWHVEATKPELAQRFKQWEVASGLSRK 60
           MS DTVDKLV+FLAKRDGIDKLVKTFQYV+KL  WHVEAT+PE A RFK+WEVASGLSRK
Sbjct: 1   MSLDTVDKLVVFLAKRDGIDKLVKTFQYVAKLACWHVEATRPEAADRFKKWEVASGLSRK 60

Query: 61  AFRTGRFLTGFNLLRRNPGATPTLRLLAVLANAGEMVYWSFDHLLWLSRIGTLDAKFARR 120
           AFRTGR LTGFN LRRNPGATP +R LAVLAN+GEMVY+ FDH LWLSRIG++DAK A++
Sbjct: 61  AFRTGRSLTGFNALRRNPGATPMIRFLAVLANSGEMVYFFFDHFLWLSRIGSIDAKLAKK 120

Query: 121 LSFISAFGESFGYVFFIIADFILMKQGLAKERQLVAPDHEEKSKDVEESLRKIKVDRVMR 180
           +SFISAFGESFGY FFII D I +KQ L   ++L     E K +++   + +I+ D VMR
Sbjct: 121 MSFISAFGESFGYTFFIIIDCIFIKQRLKSLKKLQHSTDEPK-EEIGAKISEIRGDIVMR 179

Query: 181 LMAVAANVADLIIALADIEPNPFCNHVVTLGISGLVSAWSGWYRNWPS 228
           LM ++ANVADL+IALA+I PNPFCNH +TLGISGLVSAW+GWYRNWPS
Sbjct: 180 LMGISANVADLLIALAEIHPNPFCNHTITLGISGLVSAWAGWYRNWPS 227

Involved in peroxisomal proliferation. Promotes peroxisomal duplication, aggregation or elongation without fission.
Arabidopsis thaliana (taxid: 3702)

>sp|Q7XU74|PX114_ORYSJ Peroxisomal membrane protein 11-4 OS=Oryza sativa subsp. japonica GN=PEX11-4 PE=2 SV=2

 Score =  325 bits (833), Expect = 2e-88,   Method: Compositional matrix adjust.
 Identities = 158/227 (69%), Positives = 184/227 (81%), Gaps = 7/227 (3%)

Query: 2   SNDTVDKLVIFLAKRDGIDKLVKTFQYVSKLVHWHVEATKPELAQRFKQWEVASGLSRKA 61
           + DT+DKLV+FLAKRDGIDKLVKTFQYVSKL HW  E++ P LA R K WE ++GLSRKA
Sbjct: 3   AGDTLDKLVVFLAKRDGIDKLVKTFQYVSKLAHWAAESSSPGLAGRAKNWETSAGLSRKA 62

Query: 62  FRTGRFLTGFNLLRRNPGATPTLRLLAVLANAGEMVYWSFDHLLWLSRIGTLDAKFARRL 121
           FRTGRFLTG N LRR PG       LAVLANAGEMVY+ FDH  WLSR+G LDA  ARR+
Sbjct: 63  FRTGRFLTGLNGLRRAPG---EFGALAVLANAGEMVYFFFDHFTWLSRVGVLDAWLARRM 119

Query: 122 SFISAFGESFGYVFFIIADFILMKQGLAKERQLVAPDHEEKSKDVEESLRKIKVDRVMRL 181
           SFISAFGES GYVFFI  D I++++GL +ER+L+     E  KD ++ ++KI++DRVMRL
Sbjct: 120 SFISAFGESVGYVFFIAMDLIMIRRGLRQERKLL----REGGKDKDKEVKKIRMDRVMRL 175

Query: 182 MAVAANVADLIIALADIEPNPFCNHVVTLGISGLVSAWSGWYRNWPS 228
           MA AANVADL+I +ADIEPNPFCNH VTLGISGLVSAW+GWYRNWPS
Sbjct: 176 MATAANVADLVIGIADIEPNPFCNHAVTLGISGLVSAWAGWYRNWPS 222

Involved in peroxisomal proliferation.

Oryza sativa subsp. japonica (taxid: 39947)

>sp|Q01IH3|PX114_ORYSI Peroxisomal membrane protein 11-4 OS=Oryza sativa subsp. indica GN=PEX11-4 PE=2 SV=1

 Score =  325 bits (833), Expect = 2e-88,   Method: Compositional matrix adjust.
 Identities = 158/227 (69%), Positives = 184/227 (81%), Gaps = 7/227 (3%)

Query: 2   SNDTVDKLVIFLAKRDGIDKLVKTFQYVSKLVHWHVEATKPELAQRFKQWEVASGLSRKA 61
           + DT+DKLV+FLAKRDGIDKLVKTFQYVSKL HW  E++ P LA R K WE ++GLSRKA
Sbjct: 3   AGDTLDKLVVFLAKRDGIDKLVKTFQYVSKLAHWAAESSSPGLAGRAKNWETSAGLSRKA 62

Query: 62  FRTGRFLTGFNLLRRNPGATPTLRLLAVLANAGEMVYWSFDHLLWLSRIGTLDAKFARRL 121
           FRTGRFLTG N LRR PG       LAVLANAGEMVY+ FDH  WLSR+G LDA  ARR+
Sbjct: 63  FRTGRFLTGLNGLRRAPG---EFGALAVLANAGEMVYFFFDHFTWLSRVGVLDAWLARRM 119

Query: 122 SFISAFGESFGYVFFIIADFILMKQGLAKERQLVAPDHEEKSKDVEESLRKIKVDRVMRL 181
           SFISAFGES GYVFFI  D I++++GL +ER+L+     E  KD ++ ++KI++DRVMRL
Sbjct: 120 SFISAFGESVGYVFFIAMDLIMIRRGLRQERKLL----REGGKDKDKEVKKIRMDRVMRL 175

Query: 182 MAVAANVADLIIALADIEPNPFCNHVVTLGISGLVSAWSGWYRNWPS 228
           MA AANVADL+I +ADIEPNPFCNH VTLGISGLVSAW+GWYRNWPS
Sbjct: 176 MATAANVADLVIGIADIEPNPFCNHAVTLGISGLVSAWAGWYRNWPS 222

Involved in peroxisomal proliferation.

Oryza sativa subsp. indica (taxid: 39946)

>sp|Q10MN2|PX113_ORYSJ Peroxisomal membrane protein 11-3 OS=Oryza sativa subsp. japonica GN=PEX11-3 PE=2 SV=1

 Score =  106 bits (264), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 68/218 (31%), Positives = 113/218 (51%), Gaps = 9/218 (4%)

Query: 12  FLAKRDGIDKLVKTFQYVSKLVHWHVEATKPELAQRFKQWEVASGLSRKAFRTGRFLTGF 71
           +L++RDG+DKL+K     +  +        P  + R K +E + GLSRKAFR G+F+   
Sbjct: 32  YLSRRDGVDKLLK-ISRYAARLALAAGPLPPAASARLKSFESSVGLSRKAFRLGKFVQNV 90

Query: 72  NLLRRNPGATPTLRLLAVLANAGEMVYWSFDHLLWLSRIGTLDAKFARRLSFISAFGESF 131
           N LR +P   P    +A+LA  GE VY+  +  +WL++ G L A    RL  +SA+ E  
Sbjct: 91  NALRAHPHPPPA---VALLAYGGEGVYYFLEQFVWLAKAGLLPAHLLPRLQRLSAWAELL 147

Query: 132 GYVFFIIADFILMKQGLAKERQLVAPDHEEKSKDVEESLRKIKVDRVMRLMAVAANVADL 191
           GYV  I        + + K    V    +E  ++  + +R ++V  +++ M+V  +VAD 
Sbjct: 148 GYVGSITIKL----EEIGKLESSVKMRLKEGCREESDVVRTLRVKLLLKRMSVVQDVADA 203

Query: 192 IIALADI-EPNPFCNHVVTLGISGLVSAWSGWYRNWPS 228
           ++AL D+ +          +  +GL+SA    ++NW S
Sbjct: 204 VMALGDVTDGKGLLGSSTLMASAGLLSALISAHKNWNS 241

Involved in peroxisomal proliferation.

Oryza sativa subsp. japonica (taxid: 39947)

>sp|A2XFQ8|PX113_ORYSI Peroxisomal membrane protein 11-3 OS=Oryza sativa subsp. indica GN=PEX11-3 PE=2 SV=1

 Score =  106 bits (264), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 68/218 (31%), Positives = 113/218 (51%), Gaps = 9/218 (4%)

Query: 12  FLAKRDGIDKLVKTFQYVSKLVHWHVEATKPELAQRFKQWEVASGLSRKAFRTGRFLTGF 71
           +L++RDG+DKL+K     +  +        P  + R K +E + GLSRKAFR G+F+   
Sbjct: 32  YLSRRDGVDKLLK-ISRYAARLALAAGPLPPAASARLKSFESSVGLSRKAFRLGKFVQNV 90

Query: 72  NLLRRNPGATPTLRLLAVLANAGEMVYWSFDHLLWLSRIGTLDAKFARRLSFISAFGESF 131
           N LR +P   P    +A+LA  GE VY+  +  +WL++ G L A    RL  +SA+ E  
Sbjct: 91  NALRAHPHPPPA---VALLAYGGEGVYYFLEQFVWLAKAGLLPAHLLPRLQRLSAWAELL 147

Query: 132 GYVFFIIADFILMKQGLAKERQLVAPDHEEKSKDVEESLRKIKVDRVMRLMAVAANVADL 191
           GYV  I        + + K    V    +E  ++  + +R ++V  +++ M+V  +VAD 
Sbjct: 148 GYVGSITIKL----EEIGKLESSVKMRLKEGCREESDVVRTLRVKLLLKRMSVVQDVADA 203

Query: 192 IIALADI-EPNPFCNHVVTLGISGLVSAWSGWYRNWPS 228
           ++AL D+ +          +  +GL+SA    ++NW S
Sbjct: 204 VMALGDVTDGKGLLGSSTLMASAGLLSALISAHKNWNS 241

Involved in peroxisomal proliferation.

Oryza sativa subsp. indica (taxid: 39946)

>sp|Q9FZF1|PX11A_ARATH Peroxisomal membrane protein 11A OS=Arabidopsis thaliana GN=PEX11A PE=1 SV=1

 Score = 90.9 bits (224), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 70/235 (29%), Positives = 128/235 (54%), Gaps = 13/235 (5%)

Query: 4   DTVDKLVIFLAKRDGIDKLVKTFQYVSKLVHWHVEATKPE---LAQRFKQWEVASGLSRK 60
           D ++ L  +L+KRDG+DKL+K  +Y +K++     +  PE   +  R K +E + G+SRK
Sbjct: 16  DFLNHLETYLSKRDGVDKLLKISRYATKIIL--ASSLIPETRSIIPRLKSFESSVGVSRK 73

Query: 61  AFRTGRFLTGFNLLRRNPGATPTLRLLAVLANAGEMVYWSFDHLLWLSRIGTLDAKFARR 120
           AFR G+F+   N LR +   +    +L ++A  GE +Y+  +  +WL++ G +DAK ++ 
Sbjct: 74  AFRLGKFVQDINALRSSRWDSNHELVLLIIAYGGEGLYYFVEQFIWLTKSGLIDAKHSKW 133

Query: 121 LSFISAFGESFGYVFFIIADFILMKQGLAKERQLVAPDHEEK-----SKDVEE-SLRKIK 174
           L  ISA+ E  GYV  +      +++ L  E   VA   E       + D E+  ++ IK
Sbjct: 134 LQKISAWAELVGYVGSVSIKIRDLRK-LNDEESCVASTIEISVSRGLACDGEDEKMKMIK 192

Query: 175 VDRVMRLMAVAANVADLIIALADI-EPNPFCNHVVTLGISGLVSAWSGWYRNWPS 228
             + ++++++  ++AD ++ +ADI +     +    +  +GL SA    ++NW S
Sbjct: 193 EKKTLKVLSILQDLADGLMTIADIRDGKGVLSAPNVISSAGLFSAIVSTHKNWIS 247

Involved in peroxisomal proliferation. Promotes peroxisomal duplication, aggregation or elongation without fission.

Arabidopsis thaliana (taxid: 3702)

>sp|Q54H86|PEX11_DICDI Peroxisomal membrane protein 11 homolog OS=Dictyostelium discoideum GN=pex11 PE=3 SV=1

 Score = 81.3 bits (199), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 74/251 (29%), Positives = 114/251 (45%), Gaps = 34/251 (13%)

Query: 3   NDTVDKLVIFLAKRDGIDKLVKTFQYVSKLVHWHVEATKPELAQRFKQWEVASGLSRKAF 62
           N  ++ L+  LA+  G DK+ K  QY +KL+ +             K+ E  SG +RK +
Sbjct: 11  NQFLESLIKLLAQTSGKDKIAKILQYGAKLLGYIFLKRSKHWVDVMKKLETTSGSARKVW 70

Query: 63  RTG-------RFLTGFNLLRRNPGATPTLRLLAVLANAGEMVYWSFDHLLWLSRIGTLDA 115
           R G       + L  F +  +NP A   L +LA++  +G   YW FDHL+  + IG    
Sbjct: 71  RLGNTLAEQQKILALFKV--KNPFAF--LNILALIRQSGMYFYWVFDHLILGTNIGL--C 124

Query: 116 KF-ARRLSFISAFGESFGYVFFIIADFILMKQGLAKERQL-------------VAPDHEE 161
           KF   +L + S+    FG +  II D   +   L KE+ L                D   
Sbjct: 125 KFDTVKLGWYSSVSWFFGLLCSIIIDLNTLAIMLKKEKSLRLTITQNKINANNNNIDTHT 184

Query: 162 KSKDVEESLRKIKVDRVMR-----LMAVAANVADLIIALADIEPNPFCNHVVTLGISGLV 216
            + +VE      + + V++      +  A N +DLIIA   ++  PF     T+GISG++
Sbjct: 185 ITSEVENKAIIDQFNEVIKKKNEIYLNCAKNGSDLIIASTLLKIYPFSQG--TIGISGII 242

Query: 217 SAWSGWYRNWP 227
           SA  G Y+ WP
Sbjct: 243 SALIGAYQMWP 253

Involved in peroxisomal proliferation. Could participate in peroxisomal elongation or fission. May be involved in parceling of peroxisomes into regular quanta.

Dictyostelium discoideum (taxid: 44689)

>sp|Q10MN3|PX112_ORYSJ Peroxisomal membrane protein 11-2 OS=Oryza sativa subsp. japonica GN=PEX11-2 PE=2 SV=1

 Score = 74.3 bits (181), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 63/237 (26%), Positives = 108/237 (45%), Gaps = 17/237 (7%)

Query: 2   SNDTVDKLVIFLAKRDGIDKLVKTFQYVSKLVHWHVEATKP---ELAQRFKQWEVASGLS 58
             D +  +  +L++RDG+D L+K   Y ++L         P       R + +E + GLS
Sbjct: 24  CRDILVHIEAYLSRRDGVDNLLKVSLYAARLALALAAGQPPLPHAATARLRSFESSVGLS 83

Query: 59  RKAFRTGRFLTGFNLLRR-----NPGATPTLRLLAVLANAGEMVYWSFDHLLWLSRIGTL 113
           RKAFR G+F+   N LR      +P   P   LL +LA  G+ VY   +   WL++ G L
Sbjct: 84  RKAFRLGKFVQSINALRAAAYHPHPHVHP---LLVLLAYGGQGVYNFLEQFAWLAKAGLL 140

Query: 114 DAK-FARRLSFISAFGESFGYVFFIIADFILMKQGLAKERQLVAPDHEEKSKDVEESLRK 172
            A+   RRL  I  + +   +V  I        + +A+    V    EE   +  E +R 
Sbjct: 141 PARLLPRRLHRIGVWAQLLAHVGSIAIKL----EEVAELECGVEARLEEGCGEESEVVRT 196

Query: 173 IKVDRVMRLMAVAANVADLIIALADIEPNP-FCNHVVTLGISGLVSAWSGWYRNWPS 228
           +    +++LM++  ++ D  + + D+            +  +GL+SA    ++NW S
Sbjct: 197 LSRKLLLKLMSLVQDMVDSAMTVGDVTGRKGLLGSSTLMASAGLLSALISVHKNWNS 253

Involved in peroxisomal proliferation.

Oryza sativa subsp. japonica (taxid: 39947)

>sp|Q5VRJ8|PX115_ORYSJ Peroxisomal membrane protein 11-5 OS=Oryza sativa subsp. japonica GN=PEX11-5 PE=2 SV=1

 Score = 52.4 bits (124), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 54/227 (23%), Positives = 101/227 (44%), Gaps = 19/227 (8%)

Query: 9   LVIFLAKRDGIDKLVKTFQYVSKLVHWHVEATKPELAQRFKQWEVASGLSRKAFRTGRFL 68
           L+++L K +  DK+ +  QY SK     V   +P  AQ   +   ++ L+RK FR  +F+
Sbjct: 14  LILYLNKAEARDKICRAIQYGSKF----VSNGQPGPAQNVDK---STSLARKVFRLFKFV 66

Query: 69  TGFNLLRRNPG-ATP-TLRLLAVLANAGEMVYWSFDHLLWLSRIGTLD----AKFARRLS 122
              + L   P   TP  L LL    NA    +   D ++W  R G       A+F  +++
Sbjct: 67  NDLHALISPPAKGTPLPLILLGKSKNALLSTFLFLDQIVWAGRTGIYKNKERAEFLSKIA 126

Query: 123 FISAFGESFGYVFFIIADFILMKQGLAK-ERQLVAPDHEEKSKDVEESLRKIKVDRVMRL 181
           F    G +       +A+   + + + K E++L    H+E  K+ +  ++  K +   R 
Sbjct: 127 FYCFLGSNTCTSIIEVAELQRLSKSMKKLEKEL---KHQELLKNEQYQMKLQKCNE--RR 181

Query: 182 MAVAANVADLIIALADIEPNPFCNHVVTLGISGLVSAWSGWYRNWPS 228
           +A+  +  D+++A+  ++  P        G  G  S+    Y+  P+
Sbjct: 182 LALIKSSLDIVVAIGLLQLAPKKVTPRVTGAFGFASSLIACYQLLPA 228

Involved in peroxisomal proliferation.

Oryza sativa subsp. japonica (taxid: 39947)

>sp|Q84JW1|PX11E_ARATH Peroxisomal membrane protein 11E OS=Arabidopsis thaliana GN=PEX11E PE=1 SV=1

 Score = 49.3 bits (116), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 57/227 (25%), Positives = 96/227 (42%), Gaps = 23/227 (10%)

Query: 9   LVIFLAKRDGIDKLVKTFQYVSKLVHWHVEATKPELAQRFKQWEVASGLSRKAFRTGRFL 68
           +V++L K +  DK+ +  QY SK +       +P  AQ   +    + L+RK FR  +F+
Sbjct: 14  IVLYLNKAEARDKICRAIQYGSKFLS----GGQPGTAQTVDK---NTSLARKVFRLFKFV 66

Query: 69  TGFN-LLRRNPGATP-TLRLLAVLANAGEMVYWSFDHLLWLSRIGTLDAK----FARRLS 122
             F+ L+   P  TP  L LL    NA    +   D ++WL R G    K       R+S
Sbjct: 67  NDFHGLISPVPKGTPLPLVLLGKSKNALLSTFLFLDQIVWLGRSGIYKNKERTELLGRIS 126

Query: 123 FISAFGESFGYVFFIIADFILMKQGLAK-ERQLVAPDHEEKSKDVEESLRKIKVDRVMRL 181
                G S       I +   +   + K E++L A D   ++K  + +      DR    
Sbjct: 127 LFCWLGSSVCTSAVEIGELGRLSSSMKKMEKELKADDELYRAKLQKSN------DRT--- 177

Query: 182 MAVAANVADLIIALADIEPNPFCNHVVTLGISGLVSAWSGWYRNWPS 228
           +A+  +  D+I+A+  ++  P        G  G  ++    Y+  PS
Sbjct: 178 LALIKSSMDIIVAIGLLQLAPKTISPRVTGAFGFTTSLISCYQLLPS 224

Involved in peroxisomal proliferation. Promotes peroxisomal duplication, aggregation or elongation without fission.

Arabidopsis thaliana (taxid: 3702)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	228
225466121	227	PREDICTED: peroxisomal membrane protein	0.991	0.995	0.796	1e-104
255539783	226	peroxisomal biogenesis factor, putative	0.986	0.995	0.792	1e-104
224139228	227	predicted protein [Populus trichocarpa]	0.991	0.995	0.840	1e-102
449460824	227	PREDICTED: peroxisomal membrane protein	0.991	0.995	0.769	1e-101
147771688	227	hypothetical protein VITISV_028688 [Viti	0.991	0.995	0.792	1e-100
118485948	227	unknown [Populus trichocarpa]	0.991	0.995	0.809	6e-99
224074655	227	predicted protein [Populus trichocarpa]	0.991	0.995	0.809	8e-99
356531609	223	PREDICTED: peroxisomal membrane protein	0.973	0.995	0.747	3e-98
356543034	228	PREDICTED: peroxisomal membrane protein	0.991	0.991	0.770	3e-96
15232797	227	peroxisomal membrane protein 11B [Arabid	0.995	1.0	0.723	8e-88

>gi|225466121|ref|XP_002267934.1| PREDICTED: peroxisomal membrane protein 11-4 [Vitis vinifera] gi|296084211|emb|CBI24599.3| unnamed protein product [Vitis vinifera]

 Score =  384 bits (985), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 180/226 (79%), Positives = 203/226 (89%)

Query: 3   NDTVDKLVIFLAKRDGIDKLVKTFQYVSKLVHWHVEATKPELAQRFKQWEVASGLSRKAF 62
           NDTVDKLVIFLAKRDGIDKLVKTFQYVSKLVHWHVEA  P+ A + KQWEVASGLSRKAF
Sbjct: 2   NDTVDKLVIFLAKRDGIDKLVKTFQYVSKLVHWHVEAAHPDAAHKAKQWEVASGLSRKAF 61

Query: 63  RTGRFLTGFNLLRRNPGATPTLRLLAVLANAGEMVYWSFDHLLWLSRIGTLDAKFARRLS 122
           R+GRFLTGFN LRRNPG+TPT R LAVLANAGEMVY+ FDH LWLSRIG LDAK ARR+S
Sbjct: 62  RSGRFLTGFNALRRNPGSTPTFRFLAVLANAGEMVYFFFDHFLWLSRIGVLDAKLARRMS 121

Query: 123 FISAFGESFGYVFFIIADFILMKQGLAKERQLVAPDHEEKSKDVEESLRKIKVDRVMRLM 182
           FISAFGESFGY+FFII+DFI++K G+ +ER+L+    ++ + DV+ S+RKI+ DRVMRLM
Sbjct: 122 FISAFGESFGYIFFIISDFIMIKGGVEQERKLITTSTDKSTDDVKASVRKIREDRVMRLM 181

Query: 183 AVAANVADLIIALADIEPNPFCNHVVTLGISGLVSAWSGWYRNWPS 228
           AVAANVADLIIA+ADIEPNPFCNH V+LGISGLVSAW+GWYRNWPS
Sbjct: 182 AVAANVADLIIAVADIEPNPFCNHAVSLGISGLVSAWAGWYRNWPS 227

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255539783|ref|XP_002510956.1| peroxisomal biogenesis factor, putative [Ricinus communis] gi|223550071|gb|EEF51558.1| peroxisomal biogenesis factor, putative [Ricinus communis]

 Score =  383 bits (983), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 179/226 (79%), Positives = 207/226 (91%), Gaps = 1/226 (0%)

Query: 3   NDTVDKLVIFLAKRDGIDKLVKTFQYVSKLVHWHVEATKPELAQRFKQWEVASGLSRKAF 62
           NDTVDKLV+FLAKRDGIDKLVKTFQYVSKLV+WH E+  PE+AQRFKQWEVASGLSRKAF
Sbjct: 2   NDTVDKLVVFLAKRDGIDKLVKTFQYVSKLVNWHAESKHPEIAQRFKQWEVASGLSRKAF 61

Query: 63  RTGRFLTGFNLLRRNPGATPTLRLLAVLANAGEMVYWSFDHLLWLSRIGTLDAKFARRLS 122
           RTGRFLTGFN LRR PG++ T R LAVLANAGEMVY+ FDH LWLSRIGTLDAK A+R+S
Sbjct: 62  RTGRFLTGFNALRRGPGSSTTFRFLAVLANAGEMVYFFFDHFLWLSRIGTLDAKLAKRMS 121

Query: 123 FISAFGESFGYVFFIIADFILMKQGLAKERQLVAPDHEEKSKDVEESLRKIKVDRVMRLM 182
           FISAFGESFGY+FF+IADFI++++G+ KER+LV+   E+  K+V+E+++KI+ DRVMRLM
Sbjct: 122 FISAFGESFGYIFFVIADFIMIREGIRKERKLVST-KEDDPKEVQENIKKIRADRVMRLM 180

Query: 183 AVAANVADLIIALADIEPNPFCNHVVTLGISGLVSAWSGWYRNWPS 228
           AVAAN+ADLIIALA+IEPNPFCNH VTLGISGLVSAW+GWYRNWPS
Sbjct: 181 AVAANIADLIIALAEIEPNPFCNHTVTLGISGLVSAWAGWYRNWPS 226

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224139228|ref|XP_002326800.1| predicted protein [Populus trichocarpa] gi|222834122|gb|EEE72599.1| predicted protein [Populus trichocarpa]

 Score =  375 bits (963), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 190/226 (84%), Positives = 206/226 (91%)

Query: 3   NDTVDKLVIFLAKRDGIDKLVKTFQYVSKLVHWHVEATKPELAQRFKQWEVASGLSRKAF 62
           NDTVDKLVIFLAKRDGIDKLVKTFQYVSKLVHWHVEAT P+ A RFKQWEVASGL RKAF
Sbjct: 2   NDTVDKLVIFLAKRDGIDKLVKTFQYVSKLVHWHVEATHPDAAMRFKQWEVASGLGRKAF 61

Query: 63  RTGRFLTGFNLLRRNPGATPTLRLLAVLANAGEMVYWSFDHLLWLSRIGTLDAKFARRLS 122
           RTGRFLTGFN LRR PGATPTL++LAVLANAGEMVY+ FDH LWLSRIGTLDAK ARR+S
Sbjct: 62  RTGRFLTGFNALRRGPGATPTLKVLAVLANAGEMVYFFFDHFLWLSRIGTLDAKLARRMS 121

Query: 123 FISAFGESFGYVFFIIADFILMKQGLAKERQLVAPDHEEKSKDVEESLRKIKVDRVMRLM 182
           FISA GESFGY+FFIIADFI+MK+GL  ER+L+    E+ S+D +ES RKI+V+RVMRLM
Sbjct: 122 FISALGESFGYIFFIIADFIIMKEGLETERRLLISSKEDGSEDAKESTRKIRVERVMRLM 181

Query: 183 AVAANVADLIIALADIEPNPFCNHVVTLGISGLVSAWSGWYRNWPS 228
           AVAANVADLIIALADIEPNPFCNH VTLGISGLVSAW+GWYRNWPS
Sbjct: 182 AVAANVADLIIALADIEPNPFCNHAVTLGISGLVSAWAGWYRNWPS 227

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449460824|ref|XP_004148144.1| PREDICTED: peroxisomal membrane protein 11-4-like [Cucumis sativus] gi|449516001|ref|XP_004165036.1| PREDICTED: peroxisomal membrane protein 11-4-like [Cucumis sativus]

 Score =  373 bits (958), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 174/226 (76%), Positives = 199/226 (88%)

Query: 3   NDTVDKLVIFLAKRDGIDKLVKTFQYVSKLVHWHVEATKPELAQRFKQWEVASGLSRKAF 62
           NDTVDKLVIFLAKRDGIDKLVKTFQYVSKLVHWH+E + P+ A R K WEVASG+SRKAF
Sbjct: 2   NDTVDKLVIFLAKRDGIDKLVKTFQYVSKLVHWHLETSHPDKATRAKNWEVASGISRKAF 61

Query: 63  RTGRFLTGFNLLRRNPGATPTLRLLAVLANAGEMVYWSFDHLLWLSRIGTLDAKFARRLS 122
           RTGRFLTGFN LRR+PG+TPT + LAVLANAGEMVY+ FDHLLWLSRIGTLDAK A+++S
Sbjct: 62  RTGRFLTGFNALRRSPGSTPTFQFLAVLANAGEMVYFFFDHLLWLSRIGTLDAKLAKKMS 121

Query: 123 FISAFGESFGYVFFIIADFILMKQGLAKERQLVAPDHEEKSKDVEESLRKIKVDRVMRLM 182
           FISAFGESFGY+FFI+AD I++K+G+  ER+L +   + K    EES+ KIK DR+MRLM
Sbjct: 122 FISAFGESFGYIFFIVADVIMLKRGIEAERKLRSSKEDSKEDSKEESINKIKSDRIMRLM 181

Query: 183 AVAANVADLIIALADIEPNPFCNHVVTLGISGLVSAWSGWYRNWPS 228
           AVAANVADLII LA+IEPNPFCNH +TLGISGLVSAW+GWYRNWPS
Sbjct: 182 AVAANVADLIIGLAEIEPNPFCNHTITLGISGLVSAWAGWYRNWPS 227

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147771688|emb|CAN67008.1| hypothetical protein VITISV_028688 [Vitis vinifera]

 Score =  371 bits (953), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 179/226 (79%), Positives = 201/226 (88%)

Query: 3   NDTVDKLVIFLAKRDGIDKLVKTFQYVSKLVHWHVEATKPELAQRFKQWEVASGLSRKAF 62
           NDTVDKLVIFLAKRDGIDKLVKTFQYVSKLVHWHVEA  P+ A   KQWEVASGLSRKAF
Sbjct: 2   NDTVDKLVIFLAKRDGIDKLVKTFQYVSKLVHWHVEAAHPDAAXXAKQWEVASGLSRKAF 61

Query: 63  RTGRFLTGFNLLRRNPGATPTLRLLAVLANAGEMVYWSFDHLLWLSRIGTLDAKFARRLS 122
           R+GRFLTGFN LRRNPG+TPT R LAVLANAGEMVY+ FDH LWLSRIG LDAK A R+S
Sbjct: 62  RSGRFLTGFNALRRNPGSTPTFRFLAVLANAGEMVYFFFDHFLWLSRIGVLDAKLAXRMS 121

Query: 123 FISAFGESFGYVFFIIADFILMKQGLAKERQLVAPDHEEKSKDVEESLRKIKVDRVMRLM 182
           FISAFGESFGY+FFII+DFI++K G+ +ER+L+    ++ + DV+ S+RKI+ DRVMRLM
Sbjct: 122 FISAFGESFGYIFFIISDFIMIKGGVEQERKLITTSTDKSTDDVKASVRKIREDRVMRLM 181

Query: 183 AVAANVADLIIALADIEPNPFCNHVVTLGISGLVSAWSGWYRNWPS 228
           AVAANVADLIIA+ADIEPNPFCNH V+LGISGLVSAW+GWYRNWPS
Sbjct: 182 AVAANVADLIIAVADIEPNPFCNHAVSLGISGLVSAWAGWYRNWPS 227

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|118485948|gb|ABK94819.1| unknown [Populus trichocarpa]

 Score =  365 bits (938), Expect = 6e-99,   Method: Compositional matrix adjust.
 Identities = 183/226 (80%), Positives = 204/226 (90%)

Query: 3   NDTVDKLVIFLAKRDGIDKLVKTFQYVSKLVHWHVEATKPELAQRFKQWEVASGLSRKAF 62
           NDTVD+LVIFLAKRDGIDKLVKTFQYVSKLV W VEAT P++A+RF+QWEVASGL RKAF
Sbjct: 2   NDTVDRLVIFLAKRDGIDKLVKTFQYVSKLVRWQVEATHPDVARRFQQWEVASGLGRKAF 61

Query: 63  RTGRFLTGFNLLRRNPGATPTLRLLAVLANAGEMVYWSFDHLLWLSRIGTLDAKFARRLS 122
           RTGRFLTGFN LRR PG+TPT ++LAVLANAGEMVY+ FDH LWLSRIGTLDAK A R+S
Sbjct: 62  RTGRFLTGFNALRRGPGSTPTFKILAVLANAGEMVYFFFDHFLWLSRIGTLDAKLAGRMS 121

Query: 123 FISAFGESFGYVFFIIADFILMKQGLAKERQLVAPDHEEKSKDVEESLRKIKVDRVMRLM 182
           FISAFGESFGY+FFIIADFI++K+GL +ER+L+    E+ SKD  ESLRKI+ DRVMRLM
Sbjct: 122 FISAFGESFGYIFFIIADFIIIKEGLKQERRLLTSSKEDTSKDATESLRKIRADRVMRLM 181

Query: 183 AVAANVADLIIALADIEPNPFCNHVVTLGISGLVSAWSGWYRNWPS 228
           AVAANVAD IIALADIEPNPFCNH VTLG+SGLVSAW+GWYRNWPS
Sbjct: 182 AVAANVADFIIALADIEPNPFCNHAVTLGVSGLVSAWAGWYRNWPS 227

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224074655|ref|XP_002304410.1| predicted protein [Populus trichocarpa] gi|222841842|gb|EEE79389.1| predicted protein [Populus trichocarpa]

 Score =  365 bits (937), Expect = 8e-99,   Method: Compositional matrix adjust.
 Identities = 183/226 (80%), Positives = 204/226 (90%)

Query: 3   NDTVDKLVIFLAKRDGIDKLVKTFQYVSKLVHWHVEATKPELAQRFKQWEVASGLSRKAF 62
           NDTVD+LVIFLAKRDGIDKLVKTFQYVSKLV W VEAT P++A+RF+QWEVASGL RKAF
Sbjct: 2   NDTVDRLVIFLAKRDGIDKLVKTFQYVSKLVRWQVEATHPDVARRFQQWEVASGLGRKAF 61

Query: 63  RTGRFLTGFNLLRRNPGATPTLRLLAVLANAGEMVYWSFDHLLWLSRIGTLDAKFARRLS 122
           RTGRFLTGFN LRR PG+TPT ++LAVLANAGEMVY+ FDH LWLSRIGTLDAK A R+S
Sbjct: 62  RTGRFLTGFNALRRGPGSTPTFKILAVLANAGEMVYFFFDHFLWLSRIGTLDAKLAGRMS 121

Query: 123 FISAFGESFGYVFFIIADFILMKQGLAKERQLVAPDHEEKSKDVEESLRKIKVDRVMRLM 182
           FISAFGESFGY+FFIIADFI++K+GL +ER+L+    E+ SKD  ESLRKI+ DRVMRLM
Sbjct: 122 FISAFGESFGYIFFIIADFIIIKEGLKEERRLLTSSKEDTSKDATESLRKIRADRVMRLM 181

Query: 183 AVAANVADLIIALADIEPNPFCNHVVTLGISGLVSAWSGWYRNWPS 228
           AVAANVAD IIALADIEPNPFCNH VTLG+SGLVSAW+GWYRNWPS
Sbjct: 182 AVAANVADFIIALADIEPNPFCNHAVTLGVSGLVSAWAGWYRNWPS 227

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356531609|ref|XP_003534369.1| PREDICTED: peroxisomal membrane protein 11B-like [Glycine max]

 Score =  363 bits (932), Expect = 3e-98,   Method: Compositional matrix adjust.
 Identities = 169/226 (74%), Positives = 203/226 (89%), Gaps = 4/226 (1%)

Query: 3   NDTVDKLVIFLAKRDGIDKLVKTFQYVSKLVHWHVEATKPELAQRFKQWEVASGLSRKAF 62
           ND+VDKLVIFLAKRDGIDK+VKTFQYVSKLV+WHVE T+ ++++RFKQWEVASGLSRKAF
Sbjct: 2   NDSVDKLVIFLAKRDGIDKVVKTFQYVSKLVNWHVEGTQADISRRFKQWEVASGLSRKAF 61

Query: 63  RTGRFLTGFNLLRRNPGATPTLRLLAVLANAGEMVYWSFDHLLWLSRIGTLDAKFARRLS 122
           RTGRFL+GFN+LRRNPG+T +LRLLAVLANAGEMVY+ FDH LWL+RIGT+DA  A+++S
Sbjct: 62  RTGRFLSGFNVLRRNPGSTLSLRLLAVLANAGEMVYFFFDHFLWLARIGTIDASLAKKMS 121

Query: 123 FISAFGESFGYVFFIIADFILMKQGLAKERQLVAPDHEEKSKDVEESLRKIKVDRVMRLM 182
           FISAFGES GYVFFIIADFI++K+G+  +R+L +   EE    ++  ++KI+ DR+MRLM
Sbjct: 122 FISAFGESVGYVFFIIADFIMLKEGIKAQRELSSSKEEE----IKIGIQKIRSDRIMRLM 177

Query: 183 AVAANVADLIIALADIEPNPFCNHVVTLGISGLVSAWSGWYRNWPS 228
           AVAANVADL IA+A+IEPNPFCNH VTLGISGLVSAW+GWYRNWPS
Sbjct: 178 AVAANVADLFIAIAEIEPNPFCNHTVTLGISGLVSAWAGWYRNWPS 223

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356543034|ref|XP_003539968.1| PREDICTED: peroxisomal membrane protein 11B-like [Glycine max]

 Score =  357 bits (915), Expect = 3e-96,   Method: Compositional matrix adjust.
 Identities = 175/227 (77%), Positives = 206/227 (90%), Gaps = 1/227 (0%)

Query: 3   NDTVDKLVIFLAKRDGIDKLVKTFQYVSKLVHWHVEATKPELAQRFKQWEVASGLSRKAF 62
           ND+VDKLVIFLAKRDGIDKLVKTFQYVSKLV+WHVEAT P+ ++RFKQWEVASGLSRKAF
Sbjct: 2   NDSVDKLVIFLAKRDGIDKLVKTFQYVSKLVNWHVEATHPDTSKRFKQWEVASGLSRKAF 61

Query: 63  RTGRFLTGFNLLRRNPGATPTLRLLAVLANAGEMVYWSFDHLLWLSRIGTLDAKFARRLS 122
           RTGRFLTGFN+LRRNPG+T +LRLLAVL+NAGEMVY+ FDH LWL+RIGT+DA  A+++S
Sbjct: 62  RTGRFLTGFNVLRRNPGSTLSLRLLAVLSNAGEMVYFFFDHFLWLARIGTIDASLAKKMS 121

Query: 123 FISAFGESFGYVFFIIADFILMKQGLAKERQLVAPDHEEKSKDVEES-LRKIKVDRVMRL 181
           FISAFGES GYVFFIIADFI++K+GL  ER+L     +EKS++ E++ + KI+ DR+MRL
Sbjct: 122 FISAFGESVGYVFFIIADFIMLKEGLKAERKLRRSSSKEKSEEEEKAVILKIRSDRIMRL 181

Query: 182 MAVAANVADLIIALADIEPNPFCNHVVTLGISGLVSAWSGWYRNWPS 228
           MAVAAN+ADL IA+A+IEPNPFCNH VTLGISGLVSAW+GWYRNWPS
Sbjct: 182 MAVAANLADLFIAIAEIEPNPFCNHTVTLGISGLVSAWAGWYRNWPS 228

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|15232797|ref|NP_190327.1| peroxisomal membrane protein 11B [Arabidopsis thaliana] gi|75207751|sp|Q9STY0.1|PX11B_ARATH RecName: Full=Peroxisomal membrane protein 11B; AltName: Full=Peroxin-11B; Short=AtPEX11b gi|5541710|emb|CAB51215.1| putative protein [Arabidopsis thaliana] gi|25083111|gb|AAN72044.1| putative protein [Arabidopsis thaliana] gi|30023692|gb|AAP13379.1| At3g47430 [Arabidopsis thaliana] gi|56368453|emb|CAD58678.1| putative PEX11-4 protein [Arabidopsis thaliana] gi|332644759|gb|AEE78280.1| peroxisomal membrane protein 11B [Arabidopsis thaliana]

 Score =  328 bits (842), Expect = 8e-88,   Method: Compositional matrix adjust.
 Identities = 165/228 (72%), Positives = 192/228 (84%), Gaps = 1/228 (0%)

Query: 1   MSNDTVDKLVIFLAKRDGIDKLVKTFQYVSKLVHWHVEATKPELAQRFKQWEVASGLSRK 60
           MS DTVDKLV+FLAKRDGIDKLVKTFQYV+KL  WHVEAT+PE A RFK+WEVASGLSRK
Sbjct: 1   MSLDTVDKLVVFLAKRDGIDKLVKTFQYVAKLACWHVEATRPEAADRFKKWEVASGLSRK 60

Query: 61  AFRTGRFLTGFNLLRRNPGATPTLRLLAVLANAGEMVYWSFDHLLWLSRIGTLDAKFARR 120
           AFRTGR LTGFN LRRNPGATP +R LAVLAN+GEMVY+ FDH LWLSRIG++DAK A++
Sbjct: 61  AFRTGRSLTGFNALRRNPGATPMIRFLAVLANSGEMVYFFFDHFLWLSRIGSIDAKLAKK 120

Query: 121 LSFISAFGESFGYVFFIIADFILMKQGLAKERQLVAPDHEEKSKDVEESLRKIKVDRVMR 180
           +SFISAFGESFGY FFII D I +KQ L   ++L     E K +++   + +I+ D VMR
Sbjct: 121 MSFISAFGESFGYTFFIIIDCIFIKQRLKSLKKLQHSTDEPK-EEIGAKISEIRGDIVMR 179

Query: 181 LMAVAANVADLIIALADIEPNPFCNHVVTLGISGLVSAWSGWYRNWPS 228
           LM ++ANVADL+IALA+I PNPFCNH +TLGISGLVSAW+GWYRNWPS
Sbjct: 180 LMGISANVADLLIALAEIHPNPFCNHTITLGISGLVSAWAGWYRNWPS 227

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	228
TAIR|locus:2099590	227	PEX11B "AT3G47430" [Arabidopsi	0.995	1.0	0.723	9.9e-87
TAIR|locus:2202430	248	PEX11A "AT1G47750" [Arabidopsi	0.973	0.895	0.297	1.6e-22
DICTYBASE|DDB_G0289623	254	pex11 "peroxisomal biogenesis	0.649	0.582	0.316	6.1e-10
ASPGD|ASPL0000048457	235	pexK [Emericella nidulans (tax	0.899	0.872	0.268	2.9e-08
UNIPROTKB|G4MVK9	234	MGG_08896 "Peroxisomal biogene	0.938	0.914	0.258	9.7e-08
TAIR|locus:2101012	231	PEX11E "peroxin 11E" [Arabidop	0.894	0.883	0.259	8e-06
TAIR|locus:2050694	236	PEX11D "AT2G45740" [Arabidopsi	0.907	0.877	0.245	1.5e-05
UNIPROTKB|Q00317	256	PEX11B "Peroxisomal membrane p	0.960	0.855	0.235	5.9e-05
TAIR|locus:2198150	235	PEX11C "AT1G01820" [Arabidopsi	0.903	0.876	0.253	6.1e-05
FB|FBgn0034058	241	Pex11 "Peroxin 11" [Drosophila	0.592	0.560	0.280	6.6e-05

TAIR|locus:2099590 PEX11B "AT3G47430" [Arabidopsis thaliana (taxid:3702)]

 Score = 867 (310.3 bits), Expect = 9.9e-87, P = 9.9e-87
 Identities = 165/228 (72%), Positives = 192/228 (84%)

Query:     1 MSNDTVDKLVIFLAKRDGIDKLVKTFQYVSKLVHWHVEATKPELAQRFKQWEVASGLSRK 60
             MS DTVDKLV+FLAKRDGIDKLVKTFQYV+KL  WHVEAT+PE A RFK+WEVASGLSRK
Sbjct:     1 MSLDTVDKLVVFLAKRDGIDKLVKTFQYVAKLACWHVEATRPEAADRFKKWEVASGLSRK 60

Query:    61 AFRTGRFLTGFNLLRRNPGATPTLRLLAVLANAGEMVYWSFDHLLWLSRIGTLDAKFARR 120
             AFRTGR LTGFN LRRNPGATP +R LAVLAN+GEMVY+ FDH LWLSRIG++DAK A++
Sbjct:    61 AFRTGRSLTGFNALRRNPGATPMIRFLAVLANSGEMVYFFFDHFLWLSRIGSIDAKLAKK 120

Query:   121 LSFISAFGESFGYVFFIIADFILMKQGLAKERQLVAPDHEEKSKDVEESLRKIKVDRVMR 180
             +SFISAFGESFGY FFII D I +KQ L   ++L     E K +++   + +I+ D VMR
Sbjct:   121 MSFISAFGESFGYTFFIIIDCIFIKQRLKSLKKLQHSTDEPK-EEIGAKISEIRGDIVMR 179

Query:   181 LMAVAANVADLIIALADIEPNPFCNHVVTLGISGLVSAWSGWYRNWPS 228
             LM ++ANVADL+IALA+I PNPFCNH +TLGISGLVSAW+GWYRNWPS
Sbjct:   180 LMGISANVADLLIALAEIHPNPFCNHTITLGISGLVSAWAGWYRNWPS 227

GO:0003674 "molecular_function" evidence=ND

GO:0005778 "peroxisomal membrane" evidence=ISS;IDA

GO:0005779 "integral to peroxisomal membrane" evidence=IEA

GO:0016559 "peroxisome fission" evidence=IEA;ISS;IMP

GO:0007031 "peroxisome organization" evidence=IMP

GO:0005515 "protein binding" evidence=IPI

GO:0005777 "peroxisome" evidence=IDA

GO:0042802 "identical protein binding" evidence=IDA

GO:0006098 "pentose-phosphate shunt" evidence=RCA

TAIR|locus:2202430 PEX11A "AT1G47750" [Arabidopsis thaliana (taxid:3702)]

 Score = 261 (96.9 bits), Expect = 1.6e-22, P = 1.6e-22
 Identities = 70/235 (29%), Positives = 128/235 (54%)

Query:     4 DTVDKLVIFLAKRDGIDKLVKTFQYVSKLVHWHVEATKPE---LAQRFKQWEVASGLSRK 60
             D ++ L  +L+KRDG+DKL+K  +Y +K++     +  PE   +  R K +E + G+SRK
Sbjct:    16 DFLNHLETYLSKRDGVDKLLKISRYATKIIL--ASSLIPETRSIIPRLKSFESSVGVSRK 73

Query:    61 AFRTGRFLTGFNLLRRNPGATPTLRLLAVLANAGEMVYWSFDHLLWLSRIGTLDAKFARR 120
             AFR G+F+   N LR +   +    +L ++A  GE +Y+  +  +WL++ G +DAK ++ 
Sbjct:    74 AFRLGKFVQDINALRSSRWDSNHELVLLIIAYGGEGLYYFVEQFIWLTKSGLIDAKHSKW 133

Query:   121 LSFISAFGESFGYVFFIIADFILMKQGLAKERQLVAPDHE-EKSKDV-----EESLRKIK 174
             L  ISA+ E  GYV  +      +++ L  E   VA   E   S+ +     +E ++ IK
Sbjct:   134 LQKISAWAELVGYVGSVSIKIRDLRK-LNDEESCVASTIEISVSRGLACDGEDEKMKMIK 192

Query:   175 VDRVMRLMAVAANVADLIIALADIEPNP-FCNHVVTLGISGLVSAWSGWYRNWPS 228
               + ++++++  ++AD ++ +ADI       +    +  +GL SA    ++NW S
Sbjct:   193 EKKTLKVLSILQDLADGLMTIADIRDGKGVLSAPNVISSAGLFSAIVSTHKNWIS 247

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0005778 "peroxisomal membrane" evidence=ISS

GO:0005779 "integral to peroxisomal membrane" evidence=IEA;IDA

GO:0016559 "peroxisome fission" evidence=IEA;ISS;IMP

GO:0007031 "peroxisome organization" evidence=IMP

GO:0005515 "protein binding" evidence=IPI

GO:0005777 "peroxisome" evidence=IDA

GO:0042802 "identical protein binding" evidence=IDA

DICTYBASE|DDB_G0289623 pex11 "peroxisomal biogenesis factor 11" [Dictyostelium discoideum (taxid:44689)]

 Score = 155 (59.6 bits), Expect = 6.1e-10, P = 6.1e-10
 Identities = 50/158 (31%), Positives = 75/158 (47%)

Query:     3 NDTVDKLVIFLAKRDGIDKLVKTFQYVSKLVHWHVEATKPELAQRFKQWEVASGLSRKAF 62
             N  ++ L+  LA+  G DK+ K  QY +KL+ +             K+ E  SG +RK +
Sbjct:    11 NQFLESLIKLLAQTSGKDKIAKILQYGAKLLGYIFLKRSKHWVDVMKKLETTSGSARKVW 70

Query:    63 RTGRFLTG----FNLLR-RNPGATPTLRLLAVLANAGEMVYWSFDHLLWLSRIGTLDAKF 117
             R G  L        L + +NP A   L +LA++  +G   YW FDHL+  + IG    KF
Sbjct:    71 RLGNTLAEQQKILALFKVKNPFAF--LNILALIRQSGMYFYWVFDHLILGTNIGL--CKF 126

Query:   118 AR-RLSFISAFGESFGYVFFIIADFILMKQGLAKERQL 154
                +L + S+    FG +  II D   +   L KE+ L
Sbjct:   127 DTVKLGWYSSVSWFFGLLCSIIIDLNTLAIMLKKEKSL 164

GO:0016559 "peroxisome fission" evidence=IEA

GO:0005779 "integral to peroxisomal membrane" evidence=IEA;ISS

GO:0003674 "molecular_function" evidence=ND

GO:0007165 "signal transduction" evidence=ISS

GO:0007031 "peroxisome organization" evidence=IEA;ISS

GO:0016021 "integral to membrane" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0005777 "peroxisome" evidence=IEA

GO:0005778 "peroxisomal membrane" evidence=IEA

GO:0044351 "macropinocytosis" evidence=RCA

ASPGD|ASPL0000048457 pexK [Emericella nidulans (taxid:162425)]

 Score = 142 (55.0 bits), Expect = 2.9e-08, P = 2.9e-08
 Identities = 59/220 (26%), Positives = 100/220 (45%)

Query:    12 FLAKRDGIDKLVKTFQYVSKLVHWHVEAT-KPELA-QRFKQWEVASGLSRKAFRTGRFLT 69
             F+A   G DKL++T QY S+   W++  T +P+ A   +   +   G +RK  R G+F+ 
Sbjct:    18 FVATTVGRDKLLRTLQYFSRFYAWYLYRTNQPQTAIAPYNAVKKQFGTTRKILRIGKFIE 77

Query:    70 GFN---LLRRNPGAT-PTLRLLAVLANAGEMVYWSFDHLLWLSRIGTLDAKFARRLSFIS 125
                   L   N G   P LR LA+    G   Y S D +  +  IG       +RL   S
Sbjct:    78 HLKAAALAADNKGPIDPVLRYLAIGRQLGYAGYLSLDTVTVVDVIGFRKLASVKRLQD-S 136

Query:   126 AFGESF-GYVFFIIADFILMKQGLAKERQLVAPDHEEKSKDVEESLRKIKVDRVMRLMAV 184
             A+   F G    ++A    + +   K++ L   D +E    VE   +K++ +R    + +
Sbjct:   137 AYRAWFSGLACSVLAGVYTLWRLSQKQKTL---DLKEGEGVVEA--KKLEKERSAARIQL 191

Query:   185 AANVADLIIALADIEPNPFCNHVVTLG--ISGLVSAWSGW 222
              +++ DL + ++ I      + +V +   IS L+  WS W
Sbjct:   192 ISDLCDLTVPVSAIGLANLDDGLVGIAGTISSLIGVWSQW 231

GO:0006631 "fatty acid metabolic process" evidence=IMP

GO:0016559 "peroxisome fission" evidence=IEA;ISO

GO:0005783 "endoplasmic reticulum" evidence=IEA;ISO

GO:0005778 "peroxisomal membrane" evidence=IEA;ISO

GO:0019395 "fatty acid oxidation" evidence=IEA;ISO

GO:0003674 "molecular_function" evidence=ND

GO:0005779 "integral to peroxisomal membrane" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA

UNIPROTKB|G4MVK9 MGG_08896 "Peroxisomal biogenesis factor" [Magnaporthe oryzae 70-15 (taxid:242507)]

 Score = 138 (53.6 bits), Expect = 9.7e-08, P = 9.7e-08
 Identities = 59/228 (25%), Positives = 95/228 (41%)

Query:     5 TVDKLVIFLAKRDGIDKLVKTFQYVSKLVHWHVEATKPELAQRFKQWEVAS---GLSRKA 61
             TV   + F+A   G DK+++  QY ++   W++  T     +    W       GL RK 
Sbjct:    11 TVSHYLKFVATTVGRDKVLRVIQYFARFYAWYLFRTNGTPGE-IAPWAAIKKQFGLVRKF 69

Query:    62 FRTGR---FLTGFNLLRRNPGATPTLRLLAVLANAGEMVYWSFDHLLWLSRIGTLDAKFA 118
              R G+    L    +      A P +R   V    G   Y +FD    L   G   +K A
Sbjct:    70 MRVGKNVEHLRAAAVAADAKTADPVVRYTTVGRQLGYAGYLTFDAATVLDAAGIRPSKNA 129

Query:   119 RRLSFISAFGESFGYVFFIIADFILMKQGLAKERQLVAPDHEEKSKDVEESLRKIKVDRV 178
              RL   +    +FG  F I+     + +   KER+    D +E    VE   ++I ++R 
Sbjct:   130 ARLGREAFRFWAFGLTFSIVGQLYALWR--LKERE-ARVDRKEGEGVVEG--KRIAIERA 184

Query:   179 MRLMAVAANVADLIIALADIEPNPFCNHVVTLGISGLVSAWSGWYRNW 226
                  + +++ DL I  + +   PF + +V  GI+G VS+  G    W
Sbjct:   185 AARTQLISDLCDLTIPTSALGWIPFDDGIV--GIAGTVSSLIGVMAQW 230

GO:0003674 "molecular_function" evidence=ND

TAIR|locus:2101012 PEX11E "peroxin 11E" [Arabidopsis thaliana (taxid:3702)]

 Score = 123 (48.4 bits), Expect = 8.0e-06, P = 8.0e-06
 Identities = 59/227 (25%), Positives = 96/227 (42%)

Query:     9 LVIFLAKRDGIDKLVKTFQYVSKLVHWHVEATKPELAQRFKQWEVASGLSRKAFRTGRFL 68
             +V++L K +  DK+ +  QY SK +       +P  AQ   +    + L+RK FR  +F+
Sbjct:    14 IVLYLNKAEARDKICRAIQYGSKFL----SGGQPGTAQTVDK---NTSLARKVFRLFKFV 66

Query:    69 TGFN-LLRRNPGATPT-LRLLAVLANAGEMVYWSFDHLLWLSRIGTLDAK----FARRLS 122
               F+ L+   P  TP  L LL    NA    +   D ++WL R G    K       R+S
Sbjct:    67 NDFHGLISPVPKGTPLPLVLLGKSKNALLSTFLFLDQIVWLGRSGIYKNKERTELLGRIS 126

Query:   123 FISAFGESFGYVFFIIADFILMKQGLAK-ERQLVAPDHEEKSKDVEESLRKIKVDRVMRL 181
                  G S       I +   +   + K E++L A D   ++K     L+K   DR + L
Sbjct:   127 LFCWLGSSVCTSAVEIGELGRLSSSMKKMEKELKADDELYRAK-----LQKSN-DRTLAL 180

Query:   182 MAVAANVADLIIALADIEPNPFCNHVVTLGISGLVSAWSGWYRNWPS 228
             +  + ++  + I L  + P      V   G  G  ++    Y+  PS
Sbjct:   181 IKSSMDII-VAIGLLQLAPKTISPRVT--GAFGFTTSLISCYQLLPS 224

GO:0005739 "mitochondrion" evidence=ISM;IDA

GO:0005778 "peroxisomal membrane" evidence=ISS

GO:0005779 "integral to peroxisomal membrane" evidence=IEA;IDA

GO:0016559 "peroxisome fission" evidence=IEA;ISS;IMP

GO:0007031 "peroxisome organization" evidence=IMP

GO:0005515 "protein binding" evidence=IPI

GO:0005777 "peroxisome" evidence=IDA

GO:0042802 "identical protein binding" evidence=IDA

GO:0007623 "circadian rhythm" evidence=IEP

GO:0006635 "fatty acid beta-oxidation" evidence=RCA

GO:0009062 "fatty acid catabolic process" evidence=RCA

GO:0009686 "gibberellin biosynthetic process" evidence=RCA

GO:0009740 "gibberellic acid mediated signaling pathway" evidence=RCA

TAIR|locus:2050694 PEX11D "AT2G45740" [Arabidopsis thaliana (taxid:3702)]

 Score = 121 (47.7 bits), Expect = 1.5e-05, P = 1.5e-05
 Identities = 56/228 (24%), Positives = 97/228 (42%)

Query:     9 LVIFLAKRDGIDKLVKTFQYVSKLVHWHVEATKPELAQRFKQWEVASGLSRKAFRTGRFL 68
             +V++L K +  DKL +  QY SK +       +P  AQ   +   ++ L+RK FR  +F+
Sbjct:    15 VVMYLNKAEARDKLCRAIQYGSKFL----SGGQPGTAQNVDK---STSLARKVFRLFKFV 67

Query:    69 TGFN-LLRRNPGATPT-LRLLAVLANAGEMVYWSFDHLLWLSRIGTLDAKF-ARRLSFIS 125
                + L+   P  TP  L LL    NA    +   D ++WL R G    K  A  L  IS
Sbjct:    68 NDLHGLISPVPKGTPLPLVLLGKSKNALLSTFLFLDQIVWLGRSGIYKNKERAELLGRIS 127

Query:   126 AF---GESFGYVFFIIADFILMKQGLAKERQLVAPDHEEKSKDVEESLRKIKVDRVMRLM 182
              F   G S       + +   +   + K  + +   ++ + +D    L+K       R +
Sbjct:   128 LFCWMGSSVCTTLVEVGEMGRLSSSMKKIEKGLKNGNKYQDEDYRAKLKKSNE----RSL 183

Query:   183 AVAANVADLIIA--LADIEPNPFCNHVVTLGISGLVSAWSGWYRNWPS 228
             A+  +  D+++A  L  + P      V   G  G +++    Y+  P+
Sbjct:   184 ALIKSAMDIVVAAGLLQLAPTKITPRVT--GAFGFITSIISCYQLLPT 229

GO:0003674 "molecular_function" evidence=ND

GO:0005739 "mitochondrion" evidence=ISM;IDA

GO:0005778 "peroxisomal membrane" evidence=ISS

GO:0005779 "integral to peroxisomal membrane" evidence=IEA;IDA

GO:0016559 "peroxisome fission" evidence=IEA;ISS;IMP

GO:0009507 "chloroplast" evidence=IDA

GO:0007031 "peroxisome organization" evidence=IMP

GO:0005777 "peroxisome" evidence=IDA

GO:0005515 "protein binding" evidence=IPI

GO:0042802 "identical protein binding" evidence=IDA

UNIPROTKB|Q00317 PEX11B "Peroxisomal membrane protein PMP30B" [Candida boidinii (taxid:5477)]

 Score = 117 (46.2 bits), Expect = 5.9e-05, P = 5.9e-05
 Identities = 57/242 (23%), Positives = 105/242 (43%)

Query:     6 VDKLVIFLAKRDGIDKLVKTFQYVSKLVHWHV--EATKPELAQRFKQWEVASGLSRKAFR 63
             V KL+ FL      +KL++  QY+ + + ++        E  Q  K+ + + G+SRK  R
Sbjct:    12 VTKLLKFLDSSASREKLLRLLQYLCRFLTFYTFKRNFNIETIQLIKKIQSSIGISRKPLR 71

Query:    64 TGR---FLTGFNLLRRNPGATPTLRLLAVLANAGEMVYWSFDHLLWLSRIGTLDAKFARR 120
               +    L   N +  N     TL++  ++ N G  +Y+ FD L WL  +G L +K +  
Sbjct:    72 FLKNLPHLKNLNKIYSNELLDSTLKIGDLIKNFGYALYFQFDTLQWLKLLGLLTSKNSGS 131

Query:   121 LSF-ISAFGESF---GYVFFIIADFILMKQGLAKERQLV----APDHEEKSKDVEESLRK 172
             L F I     +F   G    II D   +K      + L+    + ++   +  ++E L +
Sbjct:   132 LYFKIDKLAANFWLIGLTGSIITDLRNLKISYDSNKALLNEINSQNNNSNNDTLDEKLIE 191

Query:   173 IKVDRVMR--------LMAVAANVADLIIALADIEPNPFCNHVVTLGISGLVSAWSGWYR 224
                D +++           +  N+ D +IAL   +     + V  LG +G++++  G   
Sbjct:   192 QNNDLILKNNEKINLNKRDLFKNILDSLIALKGSQLIDLNDGV--LGFAGIITSIIGIED 249

Query:   225 NW 226
              W
Sbjct:   250 IW 251

GO:0005779 "integral to peroxisomal membrane" evidence=ISS

GO:0007031 "peroxisome organization" evidence=ISS

GO:0007165 "signal transduction" evidence=ISS

TAIR|locus:2198150 PEX11C "AT1G01820" [Arabidopsis thaliana (taxid:3702)]

 Score = 116 (45.9 bits), Expect = 6.1e-05, P = 6.1e-05
 Identities = 58/229 (25%), Positives = 100/229 (43%)

Query:     9 LVIFLAKRDGIDKLVKTFQYVSKLVHWHVEATKPELAQRFKQWEVASGLSRKAFRTGRFL 68
             +V++L K +  DK+ +  QY SK +       +P  AQ   +    + L+RK FR  +F+
Sbjct:    14 VVVYLNKAEARDKICRAIQYGSKFL----SDGQPGTAQNVDK---NTSLARKVFRLFKFV 66

Query:    69 TGFN-LLRRNPGATPT-LRLLAVLANAGEMVYWSFDHLLWLSRIGTL-DAKFARRLSFIS 125
                + L+   P  TP  L LL    NA    +   D ++WL R G   D + A  L  IS
Sbjct:    67 NDLHALISPVPKGTPLPLVLLGKSKNALLSTFLFLDQIVWLGRTGIYKDKERAEILGRIS 126

Query:   126 AF---GESFGYVFFIIADFILMKQGLAK-ERQLVAPDHEEKSKDVEESLRKIKVDRVMRL 181
              F   G S       + +   +   + K E+++    +++K ++ E+   K++      L
Sbjct:   127 LFCWMGSSVCTSLVEVGELGRLSASIKKLEKEI---GNKDKHQN-EQYRAKVEKSNERSL 182

Query:   182 MAVAANVADLIIA--LADIEPNPFCNHVVTLGISGLVSAWSGWYRNWPS 228
               + A + D+++A  L  + P      V   G  G  S+    Y+  PS
Sbjct:   183 ALIKAGM-DVVVAFGLLQLAPKKVTPRVT--GAFGFASSLISCYQLLPS 228

GO:0003674 "molecular_function" evidence=ND

GO:0005778 "peroxisomal membrane" evidence=ISS

GO:0005779 "integral to peroxisomal membrane" evidence=IEA;IDA

GO:0016559 "peroxisome fission" evidence=IEA;ISS;IMP

GO:0007031 "peroxisome organization" evidence=IMP

GO:0005515 "protein binding" evidence=IPI

GO:0005777 "peroxisome" evidence=IDA

GO:0042802 "identical protein binding" evidence=IDA

GO:0009506 "plasmodesma" evidence=IDA

GO:0009627 "systemic acquired resistance" evidence=RCA

GO:0031347 "regulation of defense response" evidence=RCA

FB|FBgn0034058 Pex11 "Peroxin 11" [Drosophila melanogaster (taxid:7227)]

 Score = 116 (45.9 bits), Expect = 6.6e-05, P = 6.6e-05
 Identities = 39/139 (28%), Positives = 63/139 (45%)

Query:     6 VDKLVIFLAKRDGIDKLVKTFQYVSKLVHWHVEA--TKPELAQRFKQWEVASGLSRKAFR 63
             +D+LV    +  G DK+ +  QY S+ +   +E+  + P L   FK  E      RK  R
Sbjct:     1 MDQLVQLNNQAGGRDKIARLIQYASRAMWDSLESANSNPALVDNFKTVEYILSTFRKLLR 60

Query:    64 TGRFLTGF-NLLRRNPGATPTLRLLAVLANAGEMVYWSFDHLLWLSRIGTLDAKFARRLS 122
              G+ +  F   L+        +R+   L+   + ++   DH LWL+R G L A  A+R S
Sbjct:    61 FGKCVDVFYGALKTIHHPDLNIRVTLTLSKLSQSLFLFADHFLWLARTG-LTAVNAKRWS 119

Query:   123 FISAFGESFGYVFFIIADF 141
              I+     F  +  +  DF
Sbjct:   120 NIANKYWLFSIIMNLCRDF 138

GO:0007031 "peroxisome organization" evidence=ISS;IMP

GO:0016559 "peroxisome fission" evidence=IEA

GO:0005779 "integral to peroxisomal membrane" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q9STY0	PX11B_ARATH	No assigned EC number	0.7236	0.9956	1.0	yes	no
Q01IH3	PX114_ORYSI	No assigned EC number	0.6960	0.9649	0.9909	N/A	no
Q7XU74	PX114_ORYSJ	No assigned EC number	0.6960	0.9649	0.9909	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	228
pfam05648	225	pfam05648, PEX11, Peroxisomal biogenesis factor 11	7e-62

>gnl|CDD|218675 pfam05648, PEX11, Peroxisomal biogenesis factor 11 (PEX11)

 Score =  192 bits (490), Expect = 7e-62
 Identities = 82/227 (36%), Positives = 118/227 (51%), Gaps = 8/227 (3%)

Query: 6   VDKLVIFLAKRDGIDKLVKTFQYVSKLVHWHVEAT--KPELAQRFKQWEVASGLSRKAFR 63
           +D LV FL    G DKL++T QY S+L+ W++      PEL  R K  E    LSRK  R
Sbjct: 1   LDHLVRFLDSTVGRDKLLRTLQYASRLLAWYLYRKGSSPELIARLKNLESQFSLSRKLLR 60

Query: 64  TGRFLTGFNLLRRNPGAT---PTLRLLAVLANAGEMVYWSFDHLLWLSRIGTLDAKFARR 120
            G+FL       +        P LRLLAVL N G  +Y  FDH+LWL++IG L  K A+R
Sbjct: 61  LGKFLEHLQAAAKYYDNKLPDPVLRLLAVLRNLGYALYLPFDHILWLAKIGLLKVKNAKR 120

Query: 121 LSFISAFGESFGYVFFIIADFILMKQGLAKERQLVAP-DHEEKSKDVEESLRKIKVDRVM 179
            S IS+    FG +  ++ D   ++Q   KE++L    D E +S    + L+KI   R  
Sbjct: 121 WSRISSRFWLFGLLLSLVRDLRELRQLQEKEKKLKKEKDSEGESTSERKLLKKILKKRPA 180

Query: 180 RLMAVAANVADLIIALADIEPNPFCNHVVTLGISGLVSAWSGWYRNW 226
            L+ +  N+ DL IAL  +       +   +G++G +S+  G Y+ W
Sbjct: 181 ALLDLVKNLCDLFIALNSL--GILRFNDGLVGLAGTISSLIGIYQLW 225

This family consists of several peroxisomal biogenesis factor 11 (PEX11) proteins from several eukaryotic species. The PEX11 peroxisomal membrane proteins promote peroxisome division in multiple eukaryotes. Length = 225

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	228
PF05648	223	PEX11: Peroxisomal biogenesis factor 11 (PEX11)	100.0
KOG4186	233	consensus Peroxisomal biogenesis protein (peroxin)	100.0

>PF05648 PEX11: Peroxisomal biogenesis factor 11 (PEX11)

Probab=100.00  E-value=1.2e-48  Score=322.45  Aligned_cols=218  Identities=31%  Similarity=0.481  Sum_probs=191.3

Q ss_pred             HHHHHHHhhhcchhHHHHHHHHHHHHHHHHHHhc--CChHHHHHHHHHHHhhhHHHHHHHhcCChhHHHHhhhC---CCC
Q 027077            6 VDKLVIFLAKRDGIDKLVKTFQYVSKLVHWHVEA--TKPELAQRFKQWEVASGLSRKAFRTGRFLTGFNLLRRN---PGA   80 (228)
Q Consensus         6 l~~~~~~l~~~~GrDK~~r~~QY~~kl~~~~l~~--~~~~~~~~~~~l~~~ls~~Rk~~Rl~~~l~~~~~l~~~---~~~   80 (228)
                      |+++++|+++++||||++|++||++++++|++.+  ++++++++++++++++|++||+||+|+++++++.+.+.   +++
T Consensus         1 l~~~~~~l~~~~GrDK~~r~~qy~~~~~~~~~~~~~~~~~~~~~~~~l~~~ls~aRk~~Rl~k~l~~l~~~~~~~~~~~~   80 (223)
T PF05648_consen    1 LDHFVRFLSSTDGRDKLLRLLQYSSKFLAWYLARRGPSKELSKRLKALSSQLSDARKLFRLGKFLPMLQAARKYIKKKPS   80 (223)
T ss_pred             CHHHHHHHccchhhHHHHHHHHHHHHHHHHHHHccCCChHHHHHHHHHHHHhhhHHHHHHHHccHHHHHHHHHhhccCCc
Confidence            5899999999999999999999999999998875  47889999999999999999999999999999988752   345


Q ss_pred             ChHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCChHhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCC
Q 027077           81 TPTLRLLAVLANAGEMVYWSFDHLLWLSRIGTLDAKFARRLSFISAFGESFGYVFFIIADFILMKQGLAKERQLVAPDHE  160 (228)
Q Consensus        81 d~~~~~l~~~~~~~~~~y~~~D~v~wl~~~gl~~~~~~~~~~~~s~~~W~~~l~~~l~~~~~~l~~~l~~e~~~~~~~~~  160 (228)
                      |++.+++++++++++++|+++||++|++++|+++.+..++++++|++||+++++++++++++++++..+++++.++...+
T Consensus        81 d~~~~~l~~l~~~~~~~y~~~D~~~wl~~~gl~~~~~~~~~~~~s~~~W~~~l~~~l~~~~~~l~~~~~~~~~~~~~~~~  160 (223)
T PF05648_consen   81 DQVLRILEILSNLFMFLYYLLDNLVWLSKLGLLPNKSKKKWSRWSNRFWFASLVLSLVRDLRELRRLRQKERSLKKQLKE  160 (223)
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccc
Confidence            78999999999999999999999999999999998876699999999999999999999999999855555554432212


Q ss_pred             CcchhHHHHHHHHHHHHHHHHHHHHHHHhHHHHHhhccCCCCcccCCchhhhhhhHHHHHHHHhhc
Q 027077          161 EKSKDVEESLRKIKVDRVMRLMAVAANVADLIIALADIEPNPFCNHVVTLGISGLVSAWSGWYRNW  226 (228)
Q Consensus       161 ~~~~e~~~~l~~~~~~r~~~~l~lv~~~~Dl~~~~~~l~~~~~~~~~~~vg~~G~iSs~i~~y~~w  226 (228)
                      ++ ++.+++++++++++++..+++++|+||+++|++++++.++  +|+++|++|++||++|+|++|
T Consensus       161 ~~-~~~~~~l~~~~~~~~~~~l~lv~~~~D~~~~~~~l~~~~~--~~~~vg~~G~iSs~i~~~~~W  223 (223)
T PF05648_consen  161 KD-ENEEEKLKKLRKERRALLLDLVKNLCDLIIAVHWLGWLKV--SDGVVGLLGLISSLIGLYQLW  223 (223)
T ss_pred             cc-chhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCeeC--ChhhHHHHHHHHHHHHHHHhC
Confidence            21 2223347788899999999999999999999999966644  999999999999999999999

>KOG4186 consensus Peroxisomal biogenesis protein (peroxin) [Intracellular trafficking, secretion, and vesicular transport]

Probab=100.00  E-value=6.6e-44  Score=289.05  Aligned_cols=219  Identities=32%  Similarity=0.519  Sum_probs=185.7

Q ss_pred             HHHHHHHhhhcchhHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHhhhHHHHHHHhcCChhHHHHhhh---CC-CCC
Q 027077            6 VDKLVIFLAKRDGIDKLVKTFQYVSKLVHWHVEATKPELAQRFKQWEVASGLSRKAFRTGRFLTGFNLLRR---NP-GAT   81 (228)
Q Consensus         6 l~~~~~~l~~~~GrDK~~r~~QY~~kl~~~~l~~~~~~~~~~~~~l~~~ls~~Rk~~Rl~~~l~~~~~l~~---~~-~~d   81 (228)
                      +|++++|+++++||||++|.+||.+++++|+++.++|+++++++++|+++|.+||+||+||++++++++.+   .+ .+|
T Consensus         1 ~d~lv~~ln~~~gRDKl~RalQY~akll~~~l~~~~p~~a~~~~kles~~S~~RK~~Rl~k~l~~~~~~~~~~~~~~~~~   80 (233)
T KOG4186|consen    1 LDHLVRFLNSAAGRDKLCRALQYVAKLLSWHLEAGSPELAKRLKKLESQLSLARKVLRLGKDLNMFQAALQYGLVPLGTD   80 (233)
T ss_pred             CcHHHHHhhhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHhcccCCCCCc
Confidence            47999999999999999999999999999999878899999999999999999999999999999998877   44 556


Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCChHhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHhhccc--C-C
Q 027077           82 PTLRLLAVLANAGEMVYWSFDHLLWLSRIGTLDAKFARRLSFISAFGESFGYVFFIIADFILMKQGLAKERQLVA--P-D  158 (228)
Q Consensus        82 ~~~~~l~~~~~~~~~~y~~~D~v~wl~~~gl~~~~~~~~~~~~s~~~W~~~l~~~l~~~~~~l~~~l~~e~~~~~--~-~  158 (228)
                      ++.+++.+++|+.+.+|+++||+.|++++|+++.+. ++|...+...|..++.+++.++++++.+ +++......  + +
T Consensus        81 ~~lr~~~~l~n~~~~~Y~~~D~v~Wl~~~gi~~~~~-~~~~~~~~~~w~~sl~l~~~r~~~~~~~-~~r~~~~~k~~~~~  158 (233)
T KOG4186|consen   81 NVLRLLGVLKNLAFALYLFLDHVLWLARTGIIPVKS-ERWKISRISLWLLSLGLNLCRDMYEVFE-LQRLSSSIKKKTKS  158 (233)
T ss_pred             chhhHHHHHhHHHHHHHHHHHHHHHHHHhCCcccch-HHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHhhhccccccccC
Confidence            669999999999999999999999999999998875 8999999999999999999999999665 554433211  1 1


Q ss_pred             CCCcchhHHHHHHHHHHH--HHHHHHHHHHHHhHHHHHhhccCCCCcccCCchhhhhhhHHHHHHHHhhcCC
Q 027077          159 HEEKSKDVEESLRKIKVD--RVMRLMAVAANVADLIIALADIEPNPFCNHVVTLGISGLVSAWSGWYRNWPS  228 (228)
Q Consensus       159 ~~~~~~e~~~~l~~~~~~--r~~~~l~lv~~~~Dl~~~~~~l~~~~~~~~~~~vg~~G~iSs~i~~y~~w~s  228 (228)
                      .++.+++..+.+++...+  +.-..++...+.||.++|...++++..  +|++||++|++||++|+|++|++
T Consensus       159 ~~~~~e~~~~~l~~~~~~~~~~~l~l~~~~~~~~~~ipl~~L~~~k~--~p~~vGl~G~vSSilg~y~~~~~  228 (233)
T KOG4186|consen  159 ISSGDEEDREKLQAQQLDQNHRLLLLSADFNAADSALPLGQLGPGKL--NPRQVGLFGLVSSILGMYQLWPP  228 (233)
T ss_pred             CCCccHHHHHHHHHHHHHccchHHHHHHHHHHHHHhhhhhccCcCcC--ChhHhhHHHHHHHHHHHHHHccc
Confidence            112223333445544433  555789999999999999999977754  99999999999999999999975

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00