Citrus Sinensis ID: 027097

---

Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------23
Protein Sequence
MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYGKPIALADREMVEEKADKILSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNAVGICGLQLYRFGETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLLDIRVKEPSLESLCRGKKLYEPPRYMTVNIAIEQLLEVELLQGESGKAHELKIILKQLQTS
Secondary Structure (PSIPRED)
cEEEEcccccccccccHHHHHHHHHccEEEEcccccccccccccccHHHHHHHHccccccccHHHHHHHHHHHHHHcccccEEEEEcccccccccHHHHHHHHHHccccEEEEccccHHHHHHHHcccccccccEEEEEEEccccccccHHHHHHHHHHccccEEEEEEEEcccccHHHHHcccccccccccccHHHHHHHHHHHHHHHcccccccccEEEEEEcccc
Secondary Structure Prediction (SSPRO)
cEEEEEcccccccccEHHHHHHHHHHcHHHHHHHHHHHHHHcccccHHHHHHHHcccEEEEcHHHHHHcHHHHHHHHccccEEEEEEccccccccHHHHHHHHHHccccEEEEEcHHHHHHHHHHccEEEccccEEEEEccccccccccHHHHHHHHHHcccEEEEEEEEEEccccHHHHHccccEccccccccHHHHHHHHHHHHHHHcccccccccEEEEEEEccc
Coil and Loop (DISEMBL)
MLYIIGlglgderdITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYGKPIALADREMVEEKADKILSESQESNVAFLVvgdpfgatthTDLVVRAKKLGIQVKAVHNASVMNAVGICGlqlyrfgetvsipfftetwrpgsfyekikrnrslglhtLCLLDirvkepsleslcrgkklyepprymtVNIAIEQLLEVELLQGESGKAHELKIILKQLQTS
Flexible Loop (DISEMBL)
mlyiiglglgderdiTLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYGKPIALADREMVEEKADKILSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNAVGICGLQLYRFGETVSIPFftetwrpgsfyeKIKRNRSLGLHTLCLLDirvkepsleslcrgkklyepprYMTVNIAIEQLLEVELLqgesgkahELKIILKQLQTS
Low Complexity Region (SEG)
MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYGKPIALADREMVEEKADKILSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNAVGICGLQLYRFGETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLLDIRVKEPSLESLCRGKKLYEPPRYMTVNIAIeqllevellqgeSGKAHELKIILKQLQTS
Disordered region (IsUnstruct)
*LYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYGKPIALADR*****************NVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNAVGICGLQLYRFGETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLLDIRVKEPSLESLCRGKKLYEPPRYMTVNIAIEQLLEVELLQGESGKAHELKIIL******
Disordered Region (DISOPRED)
MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYGKPIALADREMVEEKADKILSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNAVGICGLQLYRFGETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLLDIRVKEPSLESLCRGKKLYEPPRYMTVNIAIEQLLEVELL****GKAHELKIILKQLQT*
Disordered Region (DISEMBL)
MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYGKPIALADREMVEEKADKILSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNAVGICGLQLYRFGETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLLDIRVKEPSLESLCRGKKLYEPPRYMTVNIAIEQLLEVELLQGESGKAHELKIILKQLQTS
Disordered Region (DISPRO)
MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYGKPIALADREMVEEKADKILSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNAVGICGLQLYRFGETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLLDIRVKEPSLESLCRGKKLYEPPRYMTVNIAIEQLLEVELLQGESGKAHELKIILKQLQT*
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYGKPIALADREMVEEKADKILSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNAVGICGLQLYRFGETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLLDIRVKEPSLESLCRGKKLYEPPRYMTVNIAIEQLLEVELLQGESGKAHELKIILKQLQTS
Positional Conservation
no confident homologs detected

---

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	228	2.2.26 [Sep-21-2011]
O81769	277	Probable diphthine syntha	yes	no	0.929	0.765	0.821	1e-100
Q9CWQ0	281	Diphthine synthase OS=Mus	yes	no	0.934	0.758	0.627	5e-79
Q9H2P9	285	Diphthine synthase OS=Hom	yes	no	0.877	0.701	0.648	6e-78
Q75JG8	273	Diphthine synthase OS=Dic	yes	no	0.912	0.761	0.635	1e-76
Q5E982	285	Diphthine synthase OS=Bos	yes	no	0.877	0.701	0.639	2e-76
Q6BN80	300	Diphthine synthase OS=Deb	yes	no	0.916	0.696	0.629	4e-76
Q6C1E0	300	Diphthine synthase OS=Yar	yes	no	0.885	0.673	0.631	4e-76
Q59NX9	299	Diphthine synthase OS=Can	N/A	no	0.916	0.698	0.615	1e-74
Q7S949	287	Diphthine synthase OS=Neu	N/A	no	0.881	0.700	0.621	1e-73
O74898	283	Diphthine synthase OS=Sch	yes	no	0.881	0.710	0.621	2e-72

>sp|O81769|DPH5_ARATH Probable diphthine synthase OS=Arabidopsis thaliana GN=At4g31790 PE=2 SV=1

 Score =  362 bits (930), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 175/213 (82%), Positives = 192/213 (90%), Gaps = 1/213 (0%)

Query: 1   MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYGKPIAL 60
           MLYIIGLGLGDE+DITLRGLEAVKK  KVY+EAYTSLLSFGLS DGLS LEK YGKPI L
Sbjct: 1   MLYIIGLGLGDEKDITLRGLEAVKKSQKVYMEAYTSLLSFGLSADGLSNLEKFYGKPIIL 60

Query: 61  ADREMVEEKADKILSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMN 120
           ADREMVEEKA  ++ E+ +++VAFLVVGDPFGATTH+DLVVRAK LG++V+ VHNASVMN
Sbjct: 61  ADREMVEEKAGDMIDEAIDNDVAFLVVGDPFGATTHSDLVVRAKTLGVKVEVVHNASVMN 120

Query: 121 AVGICGLQLYRFGETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLLDIRVKEPSLESL 180
           AVGICGLQLY +GETVSIPFFTETWRP SFYEKIK+NRSLGLHTLCLLDIRVKEP+ ESL
Sbjct: 121 AVGICGLQLYHYGETVSIPFFTETWRPDSFYEKIKKNRSLGLHTLCLLDIRVKEPTFESL 180

Query: 181 CR-GKKLYEPPRYMTVNIAIEQLLEVELLQGES 212
           CR GKK YEPPRYM+VN AIEQLLEVE   G+S
Sbjct: 181 CRGGKKQYEPPRYMSVNTAIEQLLEVEQKHGDS 213

S-adenosyl-L-methionine-dependent methyltransferase that catalyzes the trimethylation of the amino group of the modified target histidine residue in translation elongation factor 2 (EF-2), to form an intermediate called diphthine. The three successive methylation reactions represent the second step of diphthamide biosynthesis.
Arabidopsis thaliana (taxid: 3702)
EC: 2EC: .EC: 1EC: .EC: 1EC: .EC: 9EC: 8

>sp|Q9CWQ0|DPH5_MOUSE Diphthine synthase OS=Mus musculus GN=Dph5 PE=2 SV=2

 Score =  293 bits (751), Expect = 5e-79,   Method: Compositional matrix adjust.
 Identities = 138/220 (62%), Positives = 177/220 (80%), Gaps = 7/220 (3%)

Query: 1   MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYGKPIAL 60
           MLY+IGLGLGD +DIT++GLE V++C +VY+EAYTS+L     T G   LE+ YG+ + L
Sbjct: 1   MLYLIGLGLGDAKDITVKGLEVVRRCSRVYLEAYTSVL-----TVGKEALEEFYGRKLIL 55

Query: 61  ADREMVEEKADKILSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMN 120
           ADRE VE++AD I  ++  S+VAFLVVGDPFGATTH+DL++RA KLGI  + +HNAS+MN
Sbjct: 56  ADREEVEQEADNIFKDADVSDVAFLVVGDPFGATTHSDLILRATKLGIPYQVIHNASIMN 115

Query: 121 AVGICGLQLYRFGETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLLDIRVKEPSLESL 180
           AVG CGLQLYRFGETVSI F+T+TWRP SF++K+KRNR+ G+HTLCLLDI+VKE SLE+L
Sbjct: 116 AVGCCGLQLYRFGETVSIVFWTDTWRPESFFDKVKRNRANGMHTLCLLDIKVKEQSLENL 175

Query: 181 CRGKKLYEPPRYMTVNIAIEQLLEVELLQGESGKAHELKI 220
            RG+K+YEPPRYM+VN A +QLLE+  +Q    +  E  I
Sbjct: 176 IRGRKIYEPPRYMSVNQAAQQLLEI--VQNHRARGEEPAI 213

S-adenosyl-L-methionine-dependent methyltransferase that catalyzes the trimethylation of the amino group of the modified target histidine residue in translation elongation factor 2 (EF-2), to form an intermediate called diphthine. The three successive methylation reactions represent the second step of diphthamide biosynthesis.

Mus musculus (taxid: 10090)

EC: 2

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 9

EC: 8

>sp|Q9H2P9|DPH5_HUMAN Diphthine synthase OS=Homo sapiens GN=DPH5 PE=1 SV=2

 Score =  290 bits (742), Expect = 6e-78,   Method: Compositional matrix adjust.
 Identities = 133/205 (64%), Positives = 172/205 (83%), Gaps = 5/205 (2%)

Query: 1   MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYGKPIAL 60
           MLY+IGLGLGD +DIT++GLE V++C +VY+EAYTS+L     T G   LE+ YG+ + +
Sbjct: 1   MLYLIGLGLGDAKDITVKGLEVVRRCSRVYLEAYTSVL-----TVGKEALEEFYGRKLVV 55

Query: 61  ADREMVEEKADKILSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMN 120
           ADRE VE++AD IL ++  S+VAFLVVGDPFGATTH+DLV+RA KLGI  + +HNAS+MN
Sbjct: 56  ADREEVEQEADNILKDADISDVAFLVVGDPFGATTHSDLVLRATKLGIPYRVIHNASIMN 115

Query: 121 AVGICGLQLYRFGETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLLDIRVKEPSLESL 180
           AVG CGLQLY+FGETVSI F+T+TWRP SF++K+K+NR  G+HTLCLLDI+VKE SLE+L
Sbjct: 116 AVGCCGLQLYKFGETVSIVFWTDTWRPESFFDKVKKNRQNGMHTLCLLDIKVKEQSLENL 175

Query: 181 CRGKKLYEPPRYMTVNIAIEQLLEV 205
            +G+K+YEPPRYM+VN A +QLLE+
Sbjct: 176 IKGRKIYEPPRYMSVNQAAQQLLEI 200

S-adenosyl-L-methionine-dependent methyltransferase that catalyzes the trimethylation of the amino group of the modified target histidine residue in translation elongation factor 2 (EF-2), to form an intermediate called diphthine. The three successive methylation reactions represent the second step of diphthamide biosynthesis.

Homo sapiens (taxid: 9606)

EC: 2

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 9

EC: 8

>sp|Q75JG8|DPH5_DICDI Diphthine synthase OS=Dictyostelium discoideum GN=dph5 PE=3 SV=1

 Score =  285 bits (730), Expect = 1e-76,   Method: Compositional matrix adjust.
 Identities = 134/211 (63%), Positives = 175/211 (82%), Gaps = 3/211 (1%)

Query: 1   MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYGKPIAL 60
           +LYIIGLGLGDE+D+T++G EA+KK  K+Y+EAYTSLL  G ST  +  LEK Y K I +
Sbjct: 2   VLYIIGLGLGDEKDVTIKGFEAIKKSSKIYLEAYTSLL--GGST-SIEALEKFYEKKIII 58

Query: 61  ADREMVEEKADKILSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMN 120
           ADREMVE   +++L ES E++V+FLVVGDPFGATTHTDLV+RAK+L I VK +HNAS+MN
Sbjct: 59  ADREMVESGCEEMLKESTENDVSFLVVGDPFGATTHTDLVIRAKELSIPVKVIHNASIMN 118

Query: 121 AVGICGLQLYRFGETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLLDIRVKEPSLESL 180
           A+G CGLQLY +G+T+S+ FFTET +P S+Y+++K NR  G+HTLCLLDI+VKE S+E++
Sbjct: 119 AIGCCGLQLYSYGQTISMVFFTETTKPDSWYDRVKINRVNGMHTLCLLDIKVKEQSIENM 178

Query: 181 CRGKKLYEPPRYMTVNIAIEQLLEVELLQGE 211
           CRG+ +YEPPR+MTVN  IEQLLE+E ++ E
Sbjct: 179 CRGRLIYEPPRFMTVNQCIEQLLEIEEIRKE 209

S-adenosyl-L-methionine-dependent methyltransferase that catalyzes the trimethylation of the amino group of the modified target histidine residue in translation elongation factor 2 (EF-2), to form an intermediate called diphthine. The three successive methylation reactions represent the second step of diphthamide biosynthesis.

Dictyostelium discoideum (taxid: 44689)

EC: 2

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 9

EC: 8

>sp|Q5E982|DPH5_BOVIN Diphthine synthase OS=Bos taurus GN=DPH5 PE=2 SV=1

 Score =  285 bits (728), Expect = 2e-76,   Method: Compositional matrix adjust.
 Identities = 131/205 (63%), Positives = 170/205 (82%), Gaps = 5/205 (2%)

Query: 1   MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYGKPIAL 60
           MLY+IGLGLGD +DIT++GLE V++C +VY+E YTS+L     T G   LE+ Y + + L
Sbjct: 1   MLYMIGLGLGDAKDITVKGLEVVRRCSRVYLETYTSVL-----TVGKEVLEEFYERKLIL 55

Query: 61  ADREMVEEKADKILSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMN 120
           ADRE VE++AD IL ++  S+VAFLVVGDPFGATTH+DL++RA KLGI  + +HNAS+MN
Sbjct: 56  ADREEVEQEADNILKDADISDVAFLVVGDPFGATTHSDLILRATKLGIPYRVIHNASIMN 115

Query: 121 AVGICGLQLYRFGETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLLDIRVKEPSLESL 180
           AVG CGLQLY+FGETVSI F+T+TWRP SF++K+K+NR  G+HTLCLLDI+VKE SLE+L
Sbjct: 116 AVGCCGLQLYKFGETVSIVFWTDTWRPESFFDKVKKNRQNGMHTLCLLDIKVKEQSLENL 175

Query: 181 CRGKKLYEPPRYMTVNIAIEQLLEV 205
            +G+K+YEPPRYM+VN A +QLLE+
Sbjct: 176 IKGRKIYEPPRYMSVNQAAQQLLEI 200

S-adenosyl-L-methionine-dependent methyltransferase that catalyzes the trimethylation of the amino group of the modified target histidine residue in translation elongation factor 2 (EF-2), to form an intermediate called diphthine. The three successive methylation reactions represent the second step of diphthamide biosynthesis.

Bos taurus (taxid: 9913)

EC: 2

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 9

EC: 8

>sp|Q6BN80|DPH5_DEBHA Diphthine synthase OS=Debaryomyces hansenii (strain ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968) GN=DPH5 PE=3 SV=1

 Score =  284 bits (726), Expect = 4e-76,   Method: Compositional matrix adjust.
 Identities = 134/213 (62%), Positives = 167/213 (78%), Gaps = 4/213 (1%)

Query: 1   MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYGKPIAL 60
           MLY+IGLGL  E DIT+RGLE +KKC +VY+EAYTS+L          +LE  YG+ I L
Sbjct: 1   MLYLIGLGLSYESDITVRGLETIKKCKRVYLEAYTSILMAA----NQESLEAFYGREIIL 56

Query: 61  ADREMVEEKADKILSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMN 120
           ADRE+VE  +DKIL  + E +VAFLVVGDPFGATTHTDL++RA++L I+V+A+HNASVMN
Sbjct: 57  ADRELVEGGSDKILENADEDDVAFLVVGDPFGATTHTDLIIRARELNIKVEAIHNASVMN 116

Query: 121 AVGICGLQLYRFGETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLLDIRVKEPSLESL 180
           AVG CGLQLY+FG+TVS+ FFTETW+P SFY KI  NR +GLHTL LLDI+VKE S+E++
Sbjct: 117 AVGACGLQLYQFGQTVSLVFFTETWKPDSFYNKIMENRRIGLHTLLLLDIKVKEQSIENM 176

Query: 181 CRGKKLYEPPRYMTVNIAIEQLLEVELLQGESG 213
            RGK +YEPPRYM +  A  QLLE+E ++ E  
Sbjct: 177 ARGKLIYEPPRYMNIETAASQLLEIEEMRQEKA 209

S-adenosyl-L-methionine-dependent methyltransferase that catalyzes the trimethylation of the amino group of the modified target histidine residue in translation elongation factor 2 (EF-2), to form an intermediate called diphthine. The three successive methylation reactions represent the second step of diphthamide biosynthesis.

Debaryomyces hansenii (strain ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968) (taxid: 284592)

EC: 2

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 9

EC: 8

>sp|Q6C1E0|DPH5_YARLI Diphthine synthase OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=DPH5 PE=3 SV=1

 Score =  284 bits (726), Expect = 4e-76,   Method: Compositional matrix adjust.
 Identities = 130/206 (63%), Positives = 167/206 (81%), Gaps = 4/206 (1%)

Query: 1   MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYGKPIAL 60
           ML++IGLGL  E DIT+RGLE +KKC +VY+EAYTS+L          TLEK YGK + L
Sbjct: 1   MLHLIGLGLSHETDITVRGLETIKKCKRVYLEAYTSILMAAEK----ETLEKFYGKELIL 56

Query: 61  ADREMVEEKADKILSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMN 120
           ADREMVE+ +D IL+ +QE ++AFLVVGDPFGATTHTDLV+RA++LGI+ + +HNASVMN
Sbjct: 57  ADREMVEQASDDILAGAQEDDIAFLVVGDPFGATTHTDLVIRARELGIKYQTIHNASVMN 116

Query: 121 AVGICGLQLYRFGETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLLDIRVKEPSLESL 180
           AVG CGLQLY FG+TVS+ FFT++W+P SFY+KI  NR +GLHTL LLDI+VKE S+E++
Sbjct: 117 AVGACGLQLYNFGQTVSLVFFTDSWKPDSFYDKIHENRKIGLHTLVLLDIKVKEQSIENI 176

Query: 181 CRGKKLYEPPRYMTVNIAIEQLLEVE 206
            RG+ ++EPPRYM++  A  QLLE+E
Sbjct: 177 MRGRNVFEPPRYMSIEQAASQLLEIE 202

S-adenosyl-L-methionine-dependent methyltransferase that catalyzes the trimethylation of the amino group of the modified target histidine residue in translation elongation factor 2 (EF-2), to form an intermediate called diphthine. The three successive methylation reactions represent the second step of diphthamide biosynthesis.

Yarrowia lipolytica (strain CLIB 122 / E 150) (taxid: 284591)

EC: 2

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 9

EC: 8

>sp|Q59NX9|DPH5_CANAL Diphthine synthase OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=DPH5 PE=3 SV=1

 Score =  279 bits (713), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 131/213 (61%), Positives = 168/213 (78%), Gaps = 4/213 (1%)

Query: 1   MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYGKPIAL 60
           MLY+IGLGL  E DIT+RGLE VKKC +VY+EAYTS+L          +LEK Y + I L
Sbjct: 1   MLYLIGLGLSYESDITVRGLETVKKCKRVYLEAYTSILMAA----NQESLEKFYSREIIL 56

Query: 61  ADREMVEEKADKILSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMN 120
           ADRE+VE  +D IL ++ + +VAFLVVGDPFGATTHTDLV+RA++LGI+V+ +HNASVMN
Sbjct: 57  ADRELVETGSDDILKDADKEDVAFLVVGDPFGATTHTDLVIRARELGIKVETIHNASVMN 116

Query: 121 AVGICGLQLYRFGETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLLDIRVKEPSLESL 180
           AVG CGLQLY+FG+TVS+ FFT++W+P SFY KI  NR +GLHTL LLDI+VKE S+E++
Sbjct: 117 AVGACGLQLYQFGQTVSLVFFTDSWKPDSFYGKIMENRKIGLHTLLLLDIKVKEQSIENM 176

Query: 181 CRGKKLYEPPRYMTVNIAIEQLLEVELLQGESG 213
            RG+ +YEPPRYM +  A +QLLE+E ++ E  
Sbjct: 177 ARGRLIYEPPRYMDIATAAQQLLEIESIRQEQA 209

S-adenosyl-L-methionine-dependent methyltransferase that catalyzes the trimethylation of the amino group of the modified target histidine residue in translation elongation factor 2 (EF-2), to form an intermediate called diphthine. The three successive methylation reactions represent the second step of diphthamide biosynthesis.

Candida albicans (strain SC5314 / ATCC MYA-2876) (taxid: 237561)

EC: 2

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 9

EC: 8

>sp|Q7S949|DPH5_NEUCR Diphthine synthase OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=dph-5 PE=3 SV=1

 Score =  275 bits (704), Expect = 1e-73,   Method: Compositional matrix adjust.
 Identities = 128/206 (62%), Positives = 166/206 (80%), Gaps = 5/206 (2%)

Query: 1   MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYGKPIAL 60
           MLY++GLGL DE DIT++GLE VKK ++VY+EAYTS+L    +T     LE  YG+PI +
Sbjct: 1   MLYLVGLGLSDETDITVKGLEVVKKAERVYLEAYTSILLVDQAT-----LESYYGRPIVV 55

Query: 61  ADREMVEEKADKILSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMN 120
           ADREMVE  +D+IL ++ + +VAF VVGDPFGATTHTDLV+RA++LGIQV+ V NAS+M+
Sbjct: 56  ADREMVESNSDEILRDADKVDVAFCVVGDPFGATTHTDLVLRARELGIQVRTVPNASIMS 115

Query: 121 AVGICGLQLYRFGETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLLDIRVKEPSLESL 180
            +G  GLQLY FG+TVS+ FF + WRP SFY++IK NRS+GLHTL LLDI+VKE SLE++
Sbjct: 116 GIGAAGLQLYNFGQTVSMVFFLDNWRPASFYDRIKENRSIGLHTLVLLDIKVKEQSLENM 175

Query: 181 CRGKKLYEPPRYMTVNIAIEQLLEVE 206
            RG+K+YEPPRYMTV    +Q+LE+E
Sbjct: 176 ARGRKIYEPPRYMTVGTCAQQMLEIE 201

S-adenosyl-L-methionine-dependent methyltransferase that catalyzes the trimethylation of the amino group of the modified target histidine residue in translation elongation factor 2 (EF-2), to form an intermediate called diphthine. The three successive methylation reactions represent the second step of diphthamide biosynthesis.

Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) (taxid: 367110)

EC: 2

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 9

EC: 8

>sp|O74898|DPH5_SCHPO Diphthine synthase OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=dph5 PE=3 SV=1

 Score =  271 bits (693), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 128/206 (62%), Positives = 162/206 (78%), Gaps = 5/206 (2%)

Query: 1   MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYGKPIAL 60
           M Y+IGLGL DE+DITLRGLE VKKC ++Y+EAYTS+L           LE+LYGK + L
Sbjct: 1   MFYLIGLGLFDEKDITLRGLETVKKCQRIYLEAYTSILLVQKEK-----LEELYGKEVIL 55

Query: 61  ADREMVEEKADKILSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMN 120
           ADREMVE  +D+IL ++   +VA LVVGDP GATTH DLV+RA++L I V+ +HNAS+MN
Sbjct: 56  ADREMVESSSDEILKDADNCDVAMLVVGDPMGATTHADLVIRARELKIPVRMIHNASIMN 115

Query: 121 AVGICGLQLYRFGETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLLDIRVKEPSLESL 180
           A+G CGLQLY+FG+TVS+ FF   +RP SFY+ IK N SLGLHTL LLDI+VKE S E+L
Sbjct: 116 AIGACGLQLYKFGQTVSLVFFENNYRPQSFYDHIKENVSLGLHTLVLLDIKVKEQSWENL 175

Query: 181 CRGKKLYEPPRYMTVNIAIEQLLEVE 206
            RG+K+YEPPRYM+ ++A +Q+LEVE
Sbjct: 176 ARGRKVYEPPRYMSASLAAQQMLEVE 201

S-adenosyl-L-methionine-dependent methyltransferase that catalyzes the trimethylation of the amino group of the modified target histidine residue in translation elongation factor 2 (EF-2), to form an intermediate called diphthine. The three successive methylation reactions represent the second step of diphthamide biosynthesis.

Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812)

EC: 2

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 9

EC: 8

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	228
225458011	285	PREDICTED: probable diphthine synthase i	0.934	0.747	0.859	1e-105
224062019	285	predicted protein [Populus trichocarpa]	0.934	0.747	0.826	1e-103
357466919	274	Diphthine synthase [Medicago truncatula]	0.969	0.806	0.800	1e-102
255538906	285	diphthine synthase, putative [Ricinus co	0.934	0.747	0.845	1e-102
356575604	278	PREDICTED: probable diphthine synthase-l	0.899	0.737	0.848	1e-101
356521535	274	PREDICTED: probable diphthine synthase-l	0.899	0.748	0.848	1e-101
353441140	242	granule diphthine synthase [Elaeis guine	0.969	0.913	0.787	1e-101
449469897	286	PREDICTED: probable diphthine synthase-l	0.929	0.741	0.816	1e-100
255637764	278	unknown [Glycine max]	0.899	0.737	0.843	1e-100
449532549	286	PREDICTED: LOW QUALITY PROTEIN: probable	0.929	0.741	0.811	1e-99

>gi|225458011|ref|XP_002280149.1| PREDICTED: probable diphthine synthase isoform 1 [Vitis vinifera] gi|359492226|ref|XP_003634386.1| PREDICTED: probable diphthine synthase isoform 2 [Vitis vinifera] gi|302142643|emb|CBI19846.3| unnamed protein product [Vitis vinifera]

 Score =  387 bits (993), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 183/213 (85%), Positives = 199/213 (93%)

Query: 1   MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYGKPIAL 60
           MLYIIGLGLGDERDITLRGLEAVKKC KV+IEAYTSLLSFGLS++GLSTLE LYGKPI L
Sbjct: 1   MLYIIGLGLGDERDITLRGLEAVKKCSKVFIEAYTSLLSFGLSSNGLSTLENLYGKPITL 60

Query: 61  ADREMVEEKADKILSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMN 120
           ADREMVEEKAD ILS+++ S+V FLVVGDPFGATTH+DLVVRAKKLG+ VK VHNASVMN
Sbjct: 61  ADREMVEEKADDILSDARHSDVGFLVVGDPFGATTHSDLVVRAKKLGVDVKVVHNASVMN 120

Query: 121 AVGICGLQLYRFGETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLLDIRVKEPSLESL 180
           A+GICGLQLYR+GET+SIPFFTETWRP SFYEKI+RNR LGLHTLCLLDIRVKEPSLESL
Sbjct: 121 AIGICGLQLYRYGETISIPFFTETWRPDSFYEKIQRNRVLGLHTLCLLDIRVKEPSLESL 180

Query: 181 CRGKKLYEPPRYMTVNIAIEQLLEVELLQGESG 213
           CRGKK YEPPRYMT+N AIEQLLEVE ++GES 
Sbjct: 181 CRGKKQYEPPRYMTINTAIEQLLEVEQMRGESA 213

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224062019|ref|XP_002300714.1| predicted protein [Populus trichocarpa] gi|222842440|gb|EEE79987.1| predicted protein [Populus trichocarpa]

 Score =  379 bits (972), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 176/213 (82%), Positives = 199/213 (93%)

Query: 1   MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYGKPIAL 60
           MLY+IGLGLGDE+DITLRGLEAVKKC+KVY+EAYTSLLSFGLSTDGLSTLEKLYGKPI +
Sbjct: 1   MLYLIGLGLGDEKDITLRGLEAVKKCEKVYMEAYTSLLSFGLSTDGLSTLEKLYGKPITV 60

Query: 61  ADREMVEEKADKILSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMN 120
           ADREMVEEK D +LSE+   +VAFLVVGDPFGATTHTDLVVRAK+LG++VK +HNASVMN
Sbjct: 61  ADREMVEEKVDSVLSEATSFDVAFLVVGDPFGATTHTDLVVRAKELGVEVKVIHNASVMN 120

Query: 121 AVGICGLQLYRFGETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLLDIRVKEPSLESL 180
           AVGICGLQLYR+GET+SIPFFT+TW+P SFYEKI+RNR LGLHTLCLLDI+VKEP+ ESL
Sbjct: 121 AVGICGLQLYRYGETISIPFFTDTWKPDSFYEKIQRNRELGLHTLCLLDIKVKEPTWESL 180

Query: 181 CRGKKLYEPPRYMTVNIAIEQLLEVELLQGESG 213
           CRGKKLYEPPR+MT+N AIEQLLE+E  +GES 
Sbjct: 181 CRGKKLYEPPRFMTINTAIEQLLEIEQNRGESA 213

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357466919|ref|XP_003603744.1| Diphthine synthase [Medicago truncatula] gi|355492792|gb|AES73995.1| Diphthine synthase [Medicago truncatula]

 Score =  376 bits (965), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 177/221 (80%), Positives = 201/221 (90%)

Query: 1   MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYGKPIAL 60
           MLYIIGLGLGDE+DITL+GLEA++KCDKVY+EAYTSLLSFGLS+ GLS LEKLYGKPI L
Sbjct: 1   MLYIIGLGLGDEQDITLKGLEAIQKCDKVYMEAYTSLLSFGLSSHGLSNLEKLYGKPIIL 60

Query: 61  ADREMVEEKADKILSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMN 120
           ADREMVEEKAD ILS++Q S+ AFLVVGDPFGATTHTDLVVRAKK+GI+VK VHNASVMN
Sbjct: 61  ADREMVEEKADDILSQAQLSHSAFLVVGDPFGATTHTDLVVRAKKMGIEVKVVHNASVMN 120

Query: 121 AVGICGLQLYRFGETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLLDIRVKEPSLESL 180
           A+GICGLQLYR+GETVSIPFFTETWRP SFYEKI++NR+LGLHTLCLLDIRVKEP+LESL
Sbjct: 121 AIGICGLQLYRYGETVSIPFFTETWRPDSFYEKIQQNRNLGLHTLCLLDIRVKEPTLESL 180

Query: 181 CRGKKLYEPPRYMTVNIAIEQLLEVELLQGESGKAHELKII 221
           CRG+K YEPPRYMT+N AIEQLLE+   + ES    + + +
Sbjct: 181 CRGRKAYEPPRYMTINTAIEQLLEISQAREESAYTEDTECV 221

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255538906|ref|XP_002510518.1| diphthine synthase, putative [Ricinus communis] gi|223551219|gb|EEF52705.1| diphthine synthase, putative [Ricinus communis]

 Score =  375 bits (962), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 180/213 (84%), Positives = 194/213 (91%)

Query: 1   MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYGKPIAL 60
           MLYIIGLGLG+E+DITLRGLEAVKKC+KVY+EAYTSLLSFGLSTDGLS LE LYGKPI +
Sbjct: 1   MLYIIGLGLGNEKDITLRGLEAVKKCEKVYMEAYTSLLSFGLSTDGLSNLENLYGKPIII 60

Query: 61  ADREMVEEKADKILSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMN 120
           ADREMVEEKAD++LS +  S+VAFLVVGDPFGATTHTDLVVRAK LGI VK VHNASVMN
Sbjct: 61  ADREMVEEKADEMLSAASSSDVAFLVVGDPFGATTHTDLVVRAKTLGIDVKVVHNASVMN 120

Query: 121 AVGICGLQLYRFGETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLLDIRVKEPSLESL 180
           AVGICGLQLYR+GETVSIPFFT+ WRPGSFYEKIK NR LGLHTLCLLDIRVKEPS ESL
Sbjct: 121 AVGICGLQLYRYGETVSIPFFTDNWRPGSFYEKIKTNRDLGLHTLCLLDIRVKEPSWESL 180

Query: 181 CRGKKLYEPPRYMTVNIAIEQLLEVELLQGESG 213
            RG+K YEPPRYMT+N AIEQLLEVE  +GES 
Sbjct: 181 SRGRKKYEPPRYMTINTAIEQLLEVEQKRGESA 213

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356575604|ref|XP_003555929.1| PREDICTED: probable diphthine synthase-like [Glycine max]

 Score =  375 bits (962), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 174/205 (84%), Positives = 194/205 (94%)

Query: 1   MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYGKPIAL 60
           MLYIIGLGLGDE+DITL+GLEAVKKC KVY+EAYTSLLSFGLST+G+S LEKLYGKPI L
Sbjct: 1   MLYIIGLGLGDEQDITLKGLEAVKKCSKVYMEAYTSLLSFGLSTNGISNLEKLYGKPIIL 60

Query: 61  ADREMVEEKADKILSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMN 120
           ADREMVEEKAD+ILSE+  ++VAFLVVGDPFGATTHTDLVVRAKK+ I+VK VHNASVMN
Sbjct: 61  ADREMVEEKADEILSEADHAHVAFLVVGDPFGATTHTDLVVRAKKMAIEVKVVHNASVMN 120

Query: 121 AVGICGLQLYRFGETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLLDIRVKEPSLESL 180
           A+G+CGLQLYR+GETVSIPFFTETWRP SFYEKI+RN S+GLHTLCLLDIRVKEP+LESL
Sbjct: 121 AIGVCGLQLYRYGETVSIPFFTETWRPDSFYEKIQRNLSMGLHTLCLLDIRVKEPTLESL 180

Query: 181 CRGKKLYEPPRYMTVNIAIEQLLEV 205
           CRG+K YEPPRYMT+N AIEQLLE+
Sbjct: 181 CRGRKAYEPPRYMTINTAIEQLLEI 205

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356521535|ref|XP_003529410.1| PREDICTED: probable diphthine synthase-like [Glycine max]

 Score =  374 bits (960), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 174/205 (84%), Positives = 193/205 (94%)

Query: 1   MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYGKPIAL 60
           MLYIIGLGLGDE+DITL+GLEAVKKCDKVY+EAYTSLLSFGLST+G+S LEKLYGKPI L
Sbjct: 1   MLYIIGLGLGDEKDITLKGLEAVKKCDKVYMEAYTSLLSFGLSTNGISNLEKLYGKPIIL 60

Query: 61  ADREMVEEKADKILSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMN 120
           ADREMVEEKA +ILSE+   +VAFLVVGDPFGATTHTDLVVRA K+GI+VK VHNASVMN
Sbjct: 61  ADREMVEEKAHEILSEADHGHVAFLVVGDPFGATTHTDLVVRANKMGIEVKVVHNASVMN 120

Query: 121 AVGICGLQLYRFGETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLLDIRVKEPSLESL 180
           A+G+CGLQLYR+GETVSIPFFTETWRP SFYEKI+RNR +GLHTLCLLDIRVKEP+LESL
Sbjct: 121 AIGVCGLQLYRYGETVSIPFFTETWRPDSFYEKIQRNRMMGLHTLCLLDIRVKEPTLESL 180

Query: 181 CRGKKLYEPPRYMTVNIAIEQLLEV 205
           CRG+K YEPPRYMT+N AIEQLLE+
Sbjct: 181 CRGRKAYEPPRYMTINTAIEQLLEI 205

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|353441140|gb|AEQ94154.1| granule diphthine synthase [Elaeis guineensis]

 Score =  372 bits (956), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 174/221 (78%), Positives = 200/221 (90%)

Query: 1   MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYGKPIAL 60
           MLYI+GLGLGDERDITLRGL+AV+ C KVY+EAYTSLL FG+S+DGLS LEKLYGK I +
Sbjct: 1   MLYIVGLGLGDERDITLRGLDAVRSCHKVYVEAYTSLLCFGISSDGLSRLEKLYGKEITV 60

Query: 61  ADREMVEEKADKILSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMN 120
           ADREMVEE+AD +LSE+ ES+VAFLVVGDPFGATTHTDLVVRA+KLGI+VK +HNASVMN
Sbjct: 61  ADREMVEERADVMLSEASESDVAFLVVGDPFGATTHTDLVVRARKLGIKVKVIHNASVMN 120

Query: 121 AVGICGLQLYRFGETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLLDIRVKEPSLESL 180
           AVG+CGLQLYR+GETVSIPFFTETWRP SFY+KI+RN+ LGLHTLCLLDIRVKEPSLESL
Sbjct: 121 AVGVCGLQLYRYGETVSIPFFTETWRPDSFYQKIQRNQQLGLHTLCLLDIRVKEPSLESL 180

Query: 181 CRGKKLYEPPRYMTVNIAIEQLLEVELLQGESGKAHELKII 221
           CRG+K YEPP+YMT++ AI QLLEVE ++ ES  + E K I
Sbjct: 181 CRGRKCYEPPKYMTIHTAINQLLEVEEMRRESAYSEESKCI 221

Source: Elaeis guineensis

Species: Elaeis guineensis

Genus: Elaeis

Family: Arecaceae

Order: Arecales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449469897|ref|XP_004152655.1| PREDICTED: probable diphthine synthase-like [Cucumis sativus]

 Score =  371 bits (952), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 173/212 (81%), Positives = 200/212 (94%)

Query: 1   MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYGKPIAL 60
           MLYIIGLGLGDE+DITLRGLE V+KC+KVY+EAYTSLLSFGL++DG+S+LEKLYGK I +
Sbjct: 1   MLYIIGLGLGDEKDITLRGLECVRKCEKVYMEAYTSLLSFGLASDGISSLEKLYGKTITV 60

Query: 61  ADREMVEEKADKILSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMN 120
           ADREMVEEKAD+ILSE++ S+VAFLVVGD FGATTH+DLVVRAK LGI+V+ V+NASVMN
Sbjct: 61  ADREMVEEKADQILSEARTSDVAFLVVGDAFGATTHSDLVVRAKSLGIEVRVVYNASVMN 120

Query: 121 AVGICGLQLYRFGETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLLDIRVKEPSLESL 180
           AVGICGLQLYR+GETVSIPFFTETW+P SFYEKI++NR LGLHTLCLLDIRVKEPSLESL
Sbjct: 121 AVGICGLQLYRYGETVSIPFFTETWKPSSFYEKIQKNRGLGLHTLCLLDIRVKEPSLESL 180

Query: 181 CRGKKLYEPPRYMTVNIAIEQLLEVELLQGES 212
           CRGKK YEPPR+M++N AIEQLLEVE ++G+S
Sbjct: 181 CRGKKEYEPPRFMSINTAIEQLLEVEQMEGQS 212

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255637764|gb|ACU19204.1| unknown [Glycine max]

 Score =  370 bits (950), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 173/205 (84%), Positives = 193/205 (94%)

Query: 1   MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYGKPIAL 60
           MLYIIGLGLGDE+DITL+GLEAVKKC KVY+EAYTSLLSFGLST+G+S LEKLYGKPI L
Sbjct: 1   MLYIIGLGLGDEQDITLKGLEAVKKCSKVYMEAYTSLLSFGLSTNGISNLEKLYGKPIIL 60

Query: 61  ADREMVEEKADKILSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMN 120
           ADREMVEEKAD+ILSE+  ++VAFLVVGDPFGATTHTDLVVRAKK+ I+VK VHNASVMN
Sbjct: 61  ADREMVEEKADEILSEADHAHVAFLVVGDPFGATTHTDLVVRAKKMAIEVKVVHNASVMN 120

Query: 121 AVGICGLQLYRFGETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLLDIRVKEPSLESL 180
           A+G+CGLQLYR+GETVSIPFFTETWRP SFYEKI+RN S+GLHTLCLLDIRVKE +LESL
Sbjct: 121 AIGVCGLQLYRYGETVSIPFFTETWRPDSFYEKIQRNLSMGLHTLCLLDIRVKELTLESL 180

Query: 181 CRGKKLYEPPRYMTVNIAIEQLLEV 205
           CRG+K YEPPRYMT+N AIEQLLE+
Sbjct: 181 CRGRKAYEPPRYMTINTAIEQLLEI 205

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449532549|ref|XP_004173243.1| PREDICTED: LOW QUALITY PROTEIN: probable diphthine synthase-like [Cucumis sativus]

 Score =  367 bits (943), Expect = 1e-99,   Method: Compositional matrix adjust.
 Identities = 172/212 (81%), Positives = 199/212 (93%)

Query: 1   MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYGKPIAL 60
           MLYIIGLGLGDE+DITLRGLE V+KC+KVY+EAYTSLLSFGL++DG+S+LEKLYGK I +
Sbjct: 1   MLYIIGLGLGDEKDITLRGLECVRKCEKVYMEAYTSLLSFGLASDGISSLEKLYGKTITV 60

Query: 61  ADREMVEEKADKILSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMN 120
           ADREMVEEKAD+ILSE++ S+VAFLVVGD FGATTH+DLVVRAK LGI+V+ V+NASVMN
Sbjct: 61  ADREMVEEKADQILSEARTSDVAFLVVGDAFGATTHSDLVVRAKSLGIEVRVVYNASVMN 120

Query: 121 AVGICGLQLYRFGETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLLDIRVKEPSLESL 180
           AVGICGLQLYR+GETVSIP FTETW+P SFYEKI++NR LGLHTLCLLDIRVKEPSLESL
Sbjct: 121 AVGICGLQLYRYGETVSIPXFTETWKPSSFYEKIQKNRGLGLHTLCLLDIRVKEPSLESL 180

Query: 181 CRGKKLYEPPRYMTVNIAIEQLLEVELLQGES 212
           CRGKK YEPPR+M++N AIEQLLEVE ++G+S
Sbjct: 181 CRGKKEYEPPRFMSINTAIEQLLEVEQMEGQS 212

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	228
TAIR|locus:2124859	277	AT4G31790 [Arabidopsis thalian	0.872	0.718	0.83	1.1e-85
MGI|MGI:1916990	281	Dph5 "DPH5 homolog (S. cerevis	0.846	0.686	0.661	2.4e-69
RGD|1307867	281	Dph5 "DPH5 homolog (S. cerevis	0.846	0.686	0.656	6.3e-69
ZFIN|ZDB-GENE-041114-85	288	dph5 "DPH5 homolog (S. cerevis	0.833	0.659	0.666	6.3e-69
UNIPROTKB|Q9H2P9	285	DPH5 "Diphthine synthase" [Hom	0.846	0.677	0.651	1.3e-68
UNIPROTKB|E2RQL8	280	DPH5 "Uncharacterized protein"	0.846	0.689	0.636	2.7e-68
UNIPROTKB|F1S569	285	DPH5 "Uncharacterized protein"	0.846	0.677	0.646	4.4e-68
DICTYBASE|DDB_G0276115	273	dph5 "diphthamide biosynthesis	0.859	0.717	0.638	2.4e-67
UNIPROTKB|Q5E982	285	DPH5 "Diphthine synthase" [Bos	0.846	0.677	0.641	2.4e-67
UNIPROTKB|F1P418	286	DPH5 "Uncharacterized protein"	0.846	0.674	0.641	1.3e-66

TAIR|locus:2124859 AT4G31790 [Arabidopsis thaliana (taxid:3702)]

 Score = 857 (306.7 bits), Expect = 1.1e-85, P = 1.1e-85
 Identities = 166/200 (83%), Positives = 182/200 (91%)

Query:     1 MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYGKPIAL 60
             MLYIIGLGLGDE+DITLRGLEAVKK  KVY+EAYTSLLSFGLS DGLS LEK YGKPI L
Sbjct:     1 MLYIIGLGLGDEKDITLRGLEAVKKSQKVYMEAYTSLLSFGLSADGLSNLEKFYGKPIIL 60

Query:    61 ADREMVEEKADKILSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMN 120
             ADREMVEEKA  ++ E+ +++VAFLVVGDPFGATTH+DLVVRAK LG++V+ VHNASVMN
Sbjct:    61 ADREMVEEKAGDMIDEAIDNDVAFLVVGDPFGATTHSDLVVRAKTLGVKVEVVHNASVMN 120

Query:   121 AVGICGLQLYRFGETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLLDIRVKEPSLESL 180
             AVGICGLQLY +GETVSIPFFTETWRP SFYEKIK+NRSLGLHTLCLLDIRVKEP+ ESL
Sbjct:   121 AVGICGLQLYHYGETVSIPFFTETWRPDSFYEKIKKNRSLGLHTLCLLDIRVKEPTFESL 180

Query:   181 CRG-KKLYEPPRYMTVNIAI 199
             CRG KK YEPPRYM+VN AI
Sbjct:   181 CRGGKKQYEPPRYMSVNTAI 200

GO:0004164 "diphthine synthase activity" evidence=IEA;ISS

GO:0005737 "cytoplasm" evidence=ISM

GO:0008152 "metabolic process" evidence=IEA;ISS

GO:0008168 "methyltransferase activity" evidence=IEA;ISS

GO:0017183 "peptidyl-diphthamide biosynthetic process from peptidyl-histidine" evidence=IEA;ISS

GO:0009220 "pyrimidine ribonucleotide biosynthetic process" evidence=RCA

MGI|MGI:1916990 Dph5 "DPH5 homolog (S. cerevisiae)" [Mus musculus (taxid:10090)]

 Score = 703 (252.5 bits), Expect = 2.4e-69, P = 2.4e-69
 Identities = 131/198 (66%), Positives = 166/198 (83%)

Query:     1 MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYGKPIAL 60
             MLY+IGLGLGD +DIT++GLE V++C +VY+EAYTS+L     T G   LE+ YG+ + L
Sbjct:     1 MLYLIGLGLGDAKDITVKGLEVVRRCSRVYLEAYTSVL-----TVGKEALEEFYGRKLIL 55

Query:    61 ADREMVEEKADKILSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMN 120
             ADRE VE++AD I  ++  S+VAFLVVGDPFGATTH+DL++RA KLGI  + +HNAS+MN
Sbjct:    56 ADREEVEQEADNIFKDADVSDVAFLVVGDPFGATTHSDLILRATKLGIPYQVIHNASIMN 115

Query:   121 AVGICGLQLYRFGETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLLDIRVKEPSLESL 180
             AVG CGLQLYRFGETVSI F+T+TWRP SF++K+KRNR+ G+HTLCLLDI+VKE SLE+L
Sbjct:   116 AVGCCGLQLYRFGETVSIVFWTDTWRPESFFDKVKRNRANGMHTLCLLDIKVKEQSLENL 175

Query:   181 CRGKKLYEPPRYMTVNIA 198
              RG+K+YEPPRYM+VN A
Sbjct:   176 IRGRKIYEPPRYMSVNQA 193

GO:0003674 "molecular_function" evidence=ND

GO:0004164 "diphthine synthase activity" evidence=IEA

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0008152 "metabolic process" evidence=IEA

GO:0008168 "methyltransferase activity" evidence=IEA

GO:0016740 "transferase activity" evidence=IEA

GO:0017183 "peptidyl-diphthamide biosynthetic process from peptidyl-histidine" evidence=IEA

GO:0032259 "methylation" evidence=IEA

RGD|1307867 Dph5 "DPH5 homolog (S. cerevisiae)" [Rattus norvegicus (taxid:10116)]

 Score = 699 (251.1 bits), Expect = 6.3e-69, P = 6.3e-69
 Identities = 130/198 (65%), Positives = 165/198 (83%)

Query:     1 MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYGKPIAL 60
             MLY+IGLGLGD +DIT++GLE V++C +VY+EAYTS+L     T G   LE+ YG+ + L
Sbjct:     1 MLYLIGLGLGDAKDITVKGLEVVRRCSRVYLEAYTSVL-----TVGKEALEEFYGRKLIL 55

Query:    61 ADREMVEEKADKILSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMN 120
             ADRE VE++AD I  ++  S+VAFLVVGDPFGATTH+DL++RA KLGI  + +HNAS+MN
Sbjct:    56 ADREEVEQEADNIFKDADVSDVAFLVVGDPFGATTHSDLILRATKLGIPYQVIHNASIMN 115

Query:   121 AVGICGLQLYRFGETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLLDIRVKEPSLESL 180
             AVG CGLQLYRFGETVSI F+T+TWRP SF++K+K+NR  G+HTLCLLDI+VKE SLE+L
Sbjct:   116 AVGCCGLQLYRFGETVSIVFWTDTWRPESFFDKVKKNRENGMHTLCLLDIKVKEQSLENL 175

Query:   181 CRGKKLYEPPRYMTVNIA 198
              RG+K+YEPPRYM+VN A
Sbjct:   176 IRGRKIYEPPRYMSVNQA 193

GO:0003674 "molecular_function" evidence=ND

GO:0004164 "diphthine synthase activity" evidence=IEA

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0017183 "peptidyl-diphthamide biosynthetic process from peptidyl-histidine" evidence=IEA

ZFIN|ZDB-GENE-041114-85 dph5 "DPH5 homolog (S. cerevisiae)" [Danio rerio (taxid:7955)]

 Score = 699 (251.1 bits), Expect = 6.3e-69, P = 6.3e-69
 Identities = 130/195 (66%), Positives = 163/195 (83%)

Query:     1 MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYGKPIAL 60
             MLY++GLGLGD +DIT++GLE ++KC +VY+EAYTS+L     T G   LE+ YG+ + L
Sbjct:     1 MLYLVGLGLGDAKDITVKGLEIIRKCSRVYLEAYTSIL-----TVGKDALEEYYGRELLL 55

Query:    61 ADREMVEEKADKILSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMN 120
             ADR+MVE++AD+IL  +   +VAFLVVGDPFGATTH+DLV+RA   GIQ + +HNASVMN
Sbjct:    56 ADRDMVEQQADEILKGADVCDVAFLVVGDPFGATTHSDLVLRALNAGIQYRVIHNASVMN 115

Query:   121 AVGICGLQLYRFGETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLLDIRVKEPSLESL 180
             AVG CGLQLY FGETVSI F+T+TWRP SFY+KIK+NR +GLHTLCLLDI+VKE S+E+L
Sbjct:   116 AVGCCGLQLYNFGETVSIVFWTDTWRPESFYDKIKKNRDMGLHTLCLLDIKVKEQSMENL 175

Query:   181 CRGKKLYEPPRYMTV 195
              RG+K+YEPPRYMTV
Sbjct:   176 VRGRKIYEPPRYMTV 190

GO:0008152 "metabolic process" evidence=IEA

GO:0008168 "methyltransferase activity" evidence=IEA

GO:0017183 "peptidyl-diphthamide biosynthetic process from peptidyl-histidine" evidence=IEA

GO:0004164 "diphthine synthase activity" evidence=IEA

GO:0005575 "cellular_component" evidence=ND

UNIPROTKB|Q9H2P9 DPH5 "Diphthine synthase" [Homo sapiens (taxid:9606)]

 Score = 696 (250.1 bits), Expect = 1.3e-68, P = 1.3e-68
 Identities = 129/198 (65%), Positives = 166/198 (83%)

Query:     1 MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYGKPIAL 60
             MLY+IGLGLGD +DIT++GLE V++C +VY+EAYTS+L     T G   LE+ YG+ + +
Sbjct:     1 MLYLIGLGLGDAKDITVKGLEVVRRCSRVYLEAYTSVL-----TVGKEALEEFYGRKLVV 55

Query:    61 ADREMVEEKADKILSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMN 120
             ADRE VE++AD IL ++  S+VAFLVVGDPFGATTH+DLV+RA KLGI  + +HNAS+MN
Sbjct:    56 ADREEVEQEADNILKDADISDVAFLVVGDPFGATTHSDLVLRATKLGIPYRVIHNASIMN 115

Query:   121 AVGICGLQLYRFGETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLLDIRVKEPSLESL 180
             AVG CGLQLY+FGETVSI F+T+TWRP SF++K+K+NR  G+HTLCLLDI+VKE SLE+L
Sbjct:   116 AVGCCGLQLYKFGETVSIVFWTDTWRPESFFDKVKKNRQNGMHTLCLLDIKVKEQSLENL 175

Query:   181 CRGKKLYEPPRYMTVNIA 198
              +G+K+YEPPRYM+VN A
Sbjct:   176 IKGRKIYEPPRYMSVNQA 193

GO:0017183 "peptidyl-diphthamide biosynthetic process from peptidyl-histidine" evidence=IEA;NAS

GO:0004164 "diphthine synthase activity" evidence=NAS

GO:0005575 "cellular_component" evidence=ND

UNIPROTKB|E2RQL8 DPH5 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 693 (249.0 bits), Expect = 2.7e-68, P = 2.7e-68
 Identities = 126/198 (63%), Positives = 166/198 (83%)

Query:     1 MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYGKPIAL 60
             MLY+IGLGLGD +DIT++GLE V++C +VY+EAYTS+L     T G   LE+ YG+ + L
Sbjct:     1 MLYLIGLGLGDAKDITVKGLEIVRRCRRVYLEAYTSIL-----TVGKEVLEEFYGRKLIL 55

Query:    61 ADREMVEEKADKILSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMN 120
             ADRE VE++AD IL ++  S+VAFLVVGDPFGATTH+DL++RA KLGI  + +HNAS+MN
Sbjct:    56 ADREEVEQEADNILKDADISDVAFLVVGDPFGATTHSDLILRATKLGISYRVIHNASIMN 115

Query:   121 AVGICGLQLYRFGETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLLDIRVKEPSLESL 180
             AVG CGLQLY+FGET+SI F+T+TWRP SF++K+K+NR  G+HTLCLLDI++KE SLE+L
Sbjct:   116 AVGCCGLQLYKFGETISIVFWTDTWRPESFFDKVKKNRQNGMHTLCLLDIKIKEQSLENL 175

Query:   181 CRGKKLYEPPRYMTVNIA 198
              +G+K+YEPPRYM++N A
Sbjct:   176 IKGRKIYEPPRYMSINQA 193

GO:0017183 "peptidyl-diphthamide biosynthetic process from peptidyl-histidine" evidence=IEA

GO:0004164 "diphthine synthase activity" evidence=IEA

UNIPROTKB|F1S569 DPH5 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 691 (248.3 bits), Expect = 4.4e-68, P = 4.4e-68
 Identities = 128/198 (64%), Positives = 165/198 (83%)

Query:     1 MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYGKPIAL 60
             MLY+IGLGLGD +DIT++GLE V++C +VY+EAYTS+L     T G   LE+ YG+ + L
Sbjct:     1 MLYMIGLGLGDAKDITVKGLEVVRRCSRVYLEAYTSIL-----TVGKEVLEEFYGRKLIL 55

Query:    61 ADREMVEEKADKILSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMN 120
             ADRE VE++AD IL ++   +VAFLVVGDPFGATTH+DL++RA KLGI  + +HNAS+MN
Sbjct:    56 ADREEVEQEADNILKDADIGDVAFLVVGDPFGATTHSDLILRATKLGIPYRVIHNASIMN 115

Query:   121 AVGICGLQLYRFGETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLLDIRVKEPSLESL 180
             AVG CGLQLY+FGETVSI F+T+TWRP SF++K+K+NR  G+HTLCLLDI+VKE SLE+L
Sbjct:   116 AVGCCGLQLYKFGETVSIVFWTDTWRPESFFDKVKKNRLNGMHTLCLLDIKVKEQSLENL 175

Query:   181 CRGKKLYEPPRYMTVNIA 198
              +G+K+YEPPRYM+VN A
Sbjct:   176 IKGRKIYEPPRYMSVNQA 193

GO:0017183 "peptidyl-diphthamide biosynthetic process from peptidyl-histidine" evidence=IEA

GO:0004164 "diphthine synthase activity" evidence=IEA

DICTYBASE|DDB_G0276115 dph5 "diphthamide biosynthesis protein 5" [Dictyostelium discoideum (taxid:44689)]

 Score = 684 (245.8 bits), Expect = 2.4e-67, P = 2.4e-67
 Identities = 127/199 (63%), Positives = 165/199 (82%)

Query:     1 MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYGKPIAL 60
             +LYIIGLGLGDE+D+T++G EA+KK  K+Y+EAYTSLL  G ST  +  LEK Y K I +
Sbjct:     2 VLYIIGLGLGDEKDVTIKGFEAIKKSSKIYLEAYTSLL--GGSTS-IEALEKFYEKKIII 58

Query:    61 ADREMVEEKADKILSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMN 120
             ADREMVE   +++L ES E++V+FLVVGDPFGATTHTDLV+RAK+L I VK +HNAS+MN
Sbjct:    59 ADREMVESGCEEMLKESTENDVSFLVVGDPFGATTHTDLVIRAKELSIPVKVIHNASIMN 118

Query:   121 AVGICGLQLYRFGETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLLDIRVKEPSLESL 180
             A+G CGLQLY +G+T+S+ FFTET +P S+Y+++K NR  G+HTLCLLDI+VKE S+E++
Sbjct:   119 AIGCCGLQLYSYGQTISMVFFTETTKPDSWYDRVKINRVNGMHTLCLLDIKVKEQSIENM 178

Query:   181 CRGKKLYEPPRYMTVNIAI 199
             CRG+ +YEPPR+MTVN  I
Sbjct:   179 CRGRLIYEPPRFMTVNQCI 197

GO:0017183 "peptidyl-diphthamide biosynthetic process from peptidyl-histidine" evidence=IEA;ISS

GO:0008168 "methyltransferase activity" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

GO:0004164 "diphthine synthase activity" evidence=IEA;ISS

GO:0005737 "cytoplasm" evidence=ISS

GO:0032259 "methylation" evidence=IEA

GO:0016740 "transferase activity" evidence=IEA

UNIPROTKB|Q5E982 DPH5 "Diphthine synthase" [Bos taurus (taxid:9913)]

 Score = 684 (245.8 bits), Expect = 2.4e-67, P = 2.4e-67
 Identities = 127/198 (64%), Positives = 164/198 (82%)

Query:     1 MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYGKPIAL 60
             MLY+IGLGLGD +DIT++GLE V++C +VY+E YTS+L     T G   LE+ Y + + L
Sbjct:     1 MLYMIGLGLGDAKDITVKGLEVVRRCSRVYLETYTSVL-----TVGKEVLEEFYERKLIL 55

Query:    61 ADREMVEEKADKILSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMN 120
             ADRE VE++AD IL ++  S+VAFLVVGDPFGATTH+DL++RA KLGI  + +HNAS+MN
Sbjct:    56 ADREEVEQEADNILKDADISDVAFLVVGDPFGATTHSDLILRATKLGIPYRVIHNASIMN 115

Query:   121 AVGICGLQLYRFGETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLLDIRVKEPSLESL 180
             AVG CGLQLY+FGETVSI F+T+TWRP SF++K+K+NR  G+HTLCLLDI+VKE SLE+L
Sbjct:   116 AVGCCGLQLYKFGETVSIVFWTDTWRPESFFDKVKKNRQNGMHTLCLLDIKVKEQSLENL 175

Query:   181 CRGKKLYEPPRYMTVNIA 198
              +G+K+YEPPRYM+VN A
Sbjct:   176 IKGRKIYEPPRYMSVNQA 193

GO:0017183 "peptidyl-diphthamide biosynthetic process from peptidyl-histidine" evidence=IEA

GO:0004164 "diphthine synthase activity" evidence=IEA

UNIPROTKB|F1P418 DPH5 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 677 (243.4 bits), Expect = 1.3e-66, P = 1.3e-66
 Identities = 127/198 (64%), Positives = 163/198 (82%)

Query:     1 MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYGKPIAL 60
             MLY++GLGLGD +DIT++GLE V++C +VY+EAYTS+L     T G   LE+ YGK + L
Sbjct:     2 MLYLVGLGLGDAKDITVKGLEVVRRCRRVYLEAYTSVL-----TVGKEALEEFYGKELIL 56

Query:    61 ADREMVEEKADKILSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMN 120
             ADRE VE++AD IL ++   +VAFLVVGDPFGATTH+DLV+RA +LGI  + +HNAS+MN
Sbjct:    57 ADRETVEQEADSILKDADVCDVAFLVVGDPFGATTHSDLVLRAVQLGIPYQVIHNASIMN 116

Query:   121 AVGICGLQLYRFGETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLLDIRVKEPSLESL 180
             AVG CGLQLY FGETVSI F+T+TW+P SF++KIKRNR  G+HTLCLLDI+VKE SL++L
Sbjct:   117 AVGCCGLQLYNFGETVSIVFWTDTWKPESFFDKIKRNRQNGMHTLCLLDIKVKEQSLDNL 176

Query:   181 CRGKKLYEPPRYMTVNIA 198
              +G+K+YEP RYM+VN A
Sbjct:   177 MKGRKIYEPSRYMSVNQA 194

GO:0004164 "diphthine synthase activity" evidence=IEA

GO:0017183 "peptidyl-diphthamide biosynthetic process from peptidyl-histidine" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q9CWQ0	DPH5_MOUSE	2, ., 1, ., 1, ., 9, 8	0.6272	0.9342	0.7580	yes	no
Q75JG8	DPH5_DICDI	2, ., 1, ., 1, ., 9, 8	0.6350	0.9122	0.7619	yes	no
Q6C1E0	DPH5_YARLI	2, ., 1, ., 1, ., 9, 8	0.6310	0.8859	0.6733	yes	no
Q6MY91	DPH5_ASPFU	2, ., 1, ., 1, ., 9, 8	0.5679	0.8815	0.7052	yes	no
Q6FXK9	DPH5_CANGA	2, ., 1, ., 1, ., 9, 8	0.5791	0.9517	0.7281	yes	no
Q6CIZ1	DPH5_KLULA	2, ., 1, ., 1, ., 9, 8	0.6	0.9035	0.6912	yes	no
O74898	DPH5_SCHPO	2, ., 1, ., 1, ., 9, 8	0.6213	0.8815	0.7102	yes	no
Q5E982	DPH5_BOVIN	2, ., 1, ., 1, ., 9, 8	0.6390	0.8771	0.7017	yes	no
P32469	DPH5_YEAST	2, ., 1, ., 1, ., 9, 8	0.6095	0.9035	0.6866	yes	no
Q5BFG0	DPH5_EMENI	2, ., 1, ., 1, ., 9, 8	0.5873	0.8815	0.7052	yes	no
O81769	DPH5_ARATH	2, ., 1, ., 1, ., 9, 8	0.8215	0.9298	0.7653	yes	no
Q754E7	DPH5_ASHGO	2, ., 1, ., 1, ., 9, 8	0.6056	0.9166	0.7013	yes	no
Q6BN80	DPH5_DEBHA	2, ., 1, ., 1, ., 9, 8	0.6291	0.9166	0.6966	yes	no
Q4HZI0	DPH5_GIBZE	2, ., 1, ., 1, ., 9, 8	0.6067	0.8815	0.7003	yes	no
Q9H2P9	DPH5_HUMAN	2, ., 1, ., 1, ., 9, 8	0.6487	0.8771	0.7017	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	2.1.1	0.921
4th Layer	2.1.1.98	0.914

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	228
PTZ00175	270	PTZ00175, PTZ00175, diphthine synthase; Provisiona	1e-131
cd11647	241	cd11647, Diphthine_synthase, Diphthine synthase, a	1e-115
COG1798	260	COG1798, DPH5, Diphthamide biosynthesis methyltran	3e-88
PRK04160	258	PRK04160, PRK04160, diphthine synthase; Provisiona	1e-80
TIGR00522	257	TIGR00522, dph5, diphthine synthase	2e-78
cd09815	224	cd09815, TP_methylase, S-AdoMet dependent tetrapyr	1e-18
pfam00590	202	pfam00590, TP_methylase, Tetrapyrrole (Corrin/Porp	3e-14
COG2243	234	COG2243, CobF, Precorrin-2 methylase [Coenzyme met	9e-10
PRK05576	229	PRK05576, PRK05576, cobalt-precorrin-2 C(20)-methy	3e-09
TIGR01467	230	TIGR01467, cobI_cbiL, precorrin-2 C20-methyltransf	7e-08
COG0313	275	COG0313, COG0313, Predicted methyltransferases [Ge	2e-05
cd11644	201	cd11644, Precorrin-6Y-methylase, Precorrin-6Y meth	2e-05
COG1010	249	COG1010, CobJ, Precorrin-3B methylase [Coenzyme me	2e-05
cd11645	226	cd11645, Precorrin_2_C20_MT, Precorrin-2 C20-methy	3e-05
cd11724	255	cd11724, TP_methylase_like, Uncharacterized subfam	7e-05
cd11723	220	cd11723, YabN_N, N-terminal S-AdoMet dependent met	1e-04
PRK05787	210	PRK05787, PRK05787, cobalt-precorrin-6Y C(5)-methy	1e-04
COG3956	488	COG3956, COG3956, Protein containing tetrapyrrole	2e-04
COG2241	210	COG2241, CobL, Precorrin-6B methylase 1 [Coenzyme	3e-04
TIGR01466	239	TIGR01466, cobJ_cbiH, precorrin-3B C17-methyltrans	0.002

>gnl|CDD|185500 PTZ00175, PTZ00175, diphthine synthase; Provisional

 Score =  369 bits (950), Expect = e-131
 Identities = 146/206 (70%), Positives = 174/206 (84%), Gaps = 4/206 (1%)

Query: 1   MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYGKPIAL 60
           MLYIIGLGLGDE+DIT++GLEAVK  D VY+E+YTS+L    + +    LE+ YGKP+  
Sbjct: 2   MLYIIGLGLGDEKDITVKGLEAVKSADVVYLESYTSIL-INSNKE---KLEEFYGKPVIE 57

Query: 61  ADREMVEEKADKILSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMN 120
           ADREMVEE  D+IL E++E NVAFLVVGDPF ATTHTDL +RAKK GI+V+ +HNAS+MN
Sbjct: 58  ADREMVEEGCDEILEEAKEKNVAFLVVGDPFCATTHTDLYLRAKKKGIEVEVIHNASIMN 117

Query: 121 AVGICGLQLYRFGETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLLDIRVKEPSLESL 180
           A+G  GLQLYRFGETVSIPFFTETW+P SFY+KIK NR  GLHTLCLLDI+VKE S+E+L
Sbjct: 118 AIGCTGLQLYRFGETVSIPFFTETWKPDSFYDKIKANRDNGLHTLCLLDIKVKERSVENL 177

Query: 181 CRGKKLYEPPRYMTVNIAIEQLLEVE 206
            +G+K+YEPPRYMT+N AIEQLLEVE
Sbjct: 178 MKGRKIYEPPRYMTINQAIEQLLEVE 203

Length = 270

>gnl|CDD|212506 cd11647, Diphthine_synthase, Diphthine synthase, also known as DPH5

 Score =  327 bits (841), Expect = e-115
 Identities = 130/207 (62%), Positives = 158/207 (76%), Gaps = 20/207 (9%)

Query: 1   MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYGKPIAL 60
           MLY++GLGLGDE+DITL+GLEAVKK DKVY+EAYTS+L  G     L  LE+ YGK I +
Sbjct: 1   MLYLVGLGLGDEKDITLKGLEAVKKADKVYLEAYTSILMGGT----LEALEEFYGKEIIV 56

Query: 61  ADREMVEEKADKILSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMN 120
           ADRE VEE++D+IL E++E +VA LVVGDPF ATTH+DL +RAK+ GI+V+ +HNAS++N
Sbjct: 57  ADREDVEEESDEILEEAKEKDVALLVVGDPFIATTHSDLRLRAKERGIEVRVIHNASILN 116

Query: 121 AVGIC-GLQLYRFGETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLLDIRVKEPSLES 179
           AVG C GLQLY+FG+TV+IPF TE WRP S Y+ IK N S GLHTLCLLDI+VKE     
Sbjct: 117 AVGSCSGLQLYKFGKTVTIPFPTEGWRPDSPYDVIKENLSRGLHTLCLLDIKVKE----- 171

Query: 180 LCRGKKLYEPPRYMTVNIAIEQLLEVE 206
                     PRYMT N A EQLLE+E
Sbjct: 172 ----------PRYMTANEAAEQLLEIE 188

Diphthine synthase, also known as diphthamide biosynthesis S-adenosylmethionine-dependent methyltransferase, participates in the posttranslational modification of a specific histidine residue in elongation factor 2 (EF-2) of eukaryotes and archaea to diphthamide. It catalyzes the trimethylation step in diphthamide biosynthesis. Diphthamide is the target of diphtheria toxin, which ADP-ribosylates diphthamide and inhibits protein synthesis, leading to host cell death. Length = 241

>gnl|CDD|224711 COG1798, DPH5, Diphthamide biosynthesis methyltransferase [Translation, ribosomal structure and biogenesis]

 Score =  260 bits (667), Expect = 3e-88
 Identities = 104/222 (46%), Positives = 138/222 (62%), Gaps = 21/222 (9%)

Query: 1   MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYGKPIAL 60
           MLY++GLGL DE DITL+GLEAV+K D+VY E YTS+L        L  LE+L GK + L
Sbjct: 1   MLYLVGLGLYDEGDITLKGLEAVRKADRVYAEFYTSILLGSN----LEKLEELIGKEVIL 56

Query: 61  ADREMVEEKADKILSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMN 120
            DRE +EE +  IL  +++ +VA LV GDP  ATTH DL + AK+ GI+V+ +H AS++N
Sbjct: 57  LDREDLEENSRSILDRAKDKDVALLVAGDPMVATTHVDLRIEAKRRGIEVRVIHGASIIN 116

Query: 121 AV-GICGLQLYRFGETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLLDIRVKEPSLES 179
           A  G+ GLQ Y+FG+TV++PF +E + P S Y+ IK N   GLHTL LLDI+  E     
Sbjct: 117 AAIGLTGLQNYKFGKTVTLPFPSENFFPTSPYDVIKENLERGLHTLVLLDIKEDE----- 171

Query: 180 LCRGKKLYEPPRYMTVNIAIEQLLEVELLQGESGKAHELKII 221
                      RYMT N A+E LLE E  +G      +   +
Sbjct: 172 -----------RYMTANEALELLLEAEERRGRGVLTEDTLAV 202

Length = 260

>gnl|CDD|235231 PRK04160, PRK04160, diphthine synthase; Provisional

 Score =  241 bits (617), Expect = 1e-80
 Identities = 104/213 (48%), Positives = 136/213 (63%), Gaps = 22/213 (10%)

Query: 1   MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYGKPIAL 60
           MLY IGLGL DERDITL+GLEA++  DKVY E YTS+L     T  +  LE+L GK I +
Sbjct: 1   MLYFIGLGLYDERDITLKGLEALRNADKVYAEFYTSILM---GTT-IEKLEELIGKEIIV 56

Query: 61  ADREMVEEKADKIL-SESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVM 119
            DRE VE++++KI+  E++E NVAFL  GDP  ATTH DL + AKK GI+V+ +H  S+ 
Sbjct: 57  LDREDVEQESEKIILEEAKEKNVAFLTAGDPMVATTHVDLRLEAKKRGIEVRVIHGVSIY 116

Query: 120 NAV-GICGLQLYRFGETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLLDIRVKEPSLE 178
           +A   + GLQ Y+FG++V++PF    + P S Y+ IK N   GLHTL LLDI+       
Sbjct: 117 SAAISLTGLQNYKFGKSVTVPFPYGNFFPESPYDVIKDNLERGLHTLVLLDIKADG---- 172

Query: 179 SLCRGKKLYEPPRYMTVNIAIEQLLEVELLQGE 211
                       RYMT N A+E LLE+E  +GE
Sbjct: 173 ------------RYMTANEALELLLELEEKRGE 193

Length = 258

>gnl|CDD|233007 TIGR00522, dph5, diphthine synthase

 Score =  235 bits (602), Expect = 2e-78
 Identities = 95/220 (43%), Positives = 134/220 (60%), Gaps = 20/220 (9%)

Query: 1   MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYGKPIAL 60
           MLY+IGLGL DE DI+++GLEA+KK D+VY E YTS L        +  +E+ +GK + +
Sbjct: 1   MLYLIGLGLYDENDISVKGLEAIKKADEVYAEFYTSKLL----GSSIEEIEEFFGKRVVV 56

Query: 61  ADREMVEEKADKILSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMN 120
            +R  VEE + +++  ++  +VA LV GDP  ATTHTDL + AK+ GI+ + +H AS+ +
Sbjct: 57  LERSDVEENSFRLIERAKSKDVALLVAGDPMVATTHTDLKLEAKRKGIETRIIHGASISS 116

Query: 121 AV-GICGLQLYRFGETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLLDIRVKEPSLES 179
           AV G+ GLQLY+FG+T +I FFT+ +RP + Y  IK NR +GLHTL LLDI  KE     
Sbjct: 117 AVCGLTGLQLYKFGKTATIVFFTDNYRPQTPYNVIKENRKIGLHTLVLLDIHPKE----- 171

Query: 180 LCRGKKLYEPPRYMTVNIAIEQLLEVELLQGESGKAHELK 219
                      R MT+   +E LLE E  +       +  
Sbjct: 172 ----------NRAMTIGEGLENLLEEEEKRKTGAITPDTY 201

Alternate name: diphthamide biosynthesis S-adenosylmethionine-dependent methyltransferase. This protein participates in the modification of a specific His of elongation factor 2 of eukarotes and Archaea to diphthamide. The protein was characterized in Saccharomyces cerevisiae and designated DPH5 [Protein fate, Protein modification and repair]. Length = 257

>gnl|CDD|212499 cd09815, TP_methylase, S-AdoMet dependent tetrapyrrole methylases

 Score = 80.9 bits (200), Expect = 1e-18
 Identities = 35/125 (28%), Positives = 51/125 (40%), Gaps = 2/125 (1%)

Query: 2   LYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYGKPIALA 61
           LY +G G GD   +TLR +E ++  D V ++   S L        L    ++        
Sbjct: 1   LYFVGAGPGDPDLLTLRAVEVLRSADVVVVDDKVSELLRLKPRAHLPDGAEIVELVDEEE 60

Query: 62  DREMVEEKADKILSE--SQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVM 119
           D   V  +  + L E   Q  +V  LV GDP  A    +L   A+  G+ V+ V   S  
Sbjct: 61  DDHGVLAEVARTLLEAARQGRDVVRLVAGDPLLAGPGAELRAVAEDAGVDVEVVPGVSSA 120

Query: 120 NAVGI 124
            AV  
Sbjct: 121 TAVPA 125

This family uses S-AdoMet (S-adenosyl-L-methionine or SAM) in the methylation of diverse substrates. Most members catalyze various methylation steps in cobalamin (vitamin B12) biosynthesis. There are two distinct cobalamin biosynthetic pathways in bacteria. The aerobic pathway requires oxygen, and cobalt is inserted late in the pathway; the anaerobic pathway does not require oxygen, and cobalt insertion is the first committed step towards cobalamin synthesis. The enzymes involved in the aerobic pathway are prefixed Cob and those of the anaerobic pathway Cbi. Most of the enzymes are shared by both pathways and a few enzymes are pathway-specific. Diphthine synthase and Ribosomal RNA small subunit methyltransferase I (RsmI) are two superfamily members that are not involved in cobalamin biosynthesis. Diphthine synthase participates in the posttranslational modification of a specific histidine residue in elongation factor 2 (EF-2) of eukaryotes and archaea to diphthamide. RsmI catalyzes the 2-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA using S-adenosylmethionine (Ado-Met) as the methyl donor. Length = 224

>gnl|CDD|216012 pfam00590, TP_methylase, Tetrapyrrole (Corrin/Porphyrin) Methylases

 Score = 68.5 bits (168), Expect = 3e-14
 Identities = 46/185 (24%), Positives = 66/185 (35%), Gaps = 20/185 (10%)

Query: 1   MLYIIGLGLGDERDITLRGLEAVKKCDKVYIE--AYTSLLSFGLSTDGLSTLEKLYGKPI 58
            LYI+G+G GD   +TLR L A+K+ D V  +  A   LL                 + +
Sbjct: 1   KLYIVGIGPGDPELLTLRALRALKEADVVIGDDRALEILLDLLRPMGK-------ELELL 53

Query: 59  ALADREMVEEKADKILSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASV 118
             A  E+ E      L  + + +V  LV GDP    T + LV   +  GI+V+ +   S 
Sbjct: 54  EGAYEEIAELLEAAALLRAGK-DVVVLVSGDPLVYGTGSYLVEALEAAGIEVEVIPGISS 112

Query: 119 MNAVGIC-GLQLYRFGETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLLDIRVKEPSL 177
           + A     G+ L   G            R             L   TL LL        L
Sbjct: 113 LQAAAARLGIPLTDGGVVSLHG------RGLETLRARLLEALLAGDTLVLLTDP---HRL 163

Query: 178 ESLCR 182
             +  
Sbjct: 164 AEIAE 168

This family uses S-AdoMet in the methylation of diverse substrates. This family includes a related group of bacterial proteins of unknown function. This family includes the methylase Dipthine synthase. Length = 202

>gnl|CDD|225152 COG2243, CobF, Precorrin-2 methylase [Coenzyme metabolism]

 Score = 56.5 bits (137), Expect = 9e-10
 Identities = 38/122 (31%), Positives = 63/122 (51%), Gaps = 9/122 (7%)

Query: 1   MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSL--LSFGLSTDGLS--TLEKLYGK 56
            LY +GLG GD   +TL+ + A+KK D VY+ +      L+  +  D L+  +       
Sbjct: 3   KLYGVGLGPGDPELLTLKAIRALKKADVVYVPSKKGKGSLAREIVEDYLTPGSRIVELHF 62

Query: 57  PIALADREMV----EEKADKILSESQE-SNVAFLVVGDPFGATTHTDLVVRAKKLGIQVK 111
           P+    RE +    EE A ++ +E +   +VAFL +GDP   +T   L+ R ++ G +V+
Sbjct: 63  PMTTDMREELEDAWEEAAAEVAAELEAGRDVAFLTLGDPTFYSTFMYLLERLRERGFEVE 122

Query: 112 AV 113
            V
Sbjct: 123 VV 124

Length = 234

>gnl|CDD|235512 PRK05576, PRK05576, cobalt-precorrin-2 C(20)-methyltransferase; Validated

 Score = 54.9 bits (133), Expect = 3e-09
 Identities = 36/128 (28%), Positives = 57/128 (44%), Gaps = 21/128 (16%)

Query: 1   MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLS-TLEKLYGKPIA 59
            LY IGLG GD   +T++    +++ D VY  A             L+  + + Y K   
Sbjct: 3   KLYGIGLGPGDPELLTVKAARILEEADVVYAPASRK------GGGSLALNIVRPYLKEET 56

Query: 60  ---------LADREMVEEK----ADKILSESQE-SNVAFLVVGDPFGATTHTDLVVRAKK 105
                      D E  E      A++I +E++E  NVAF+ +GDP   +T + L+   K 
Sbjct: 57  EIVELHFPMSKDEEEKEAVWKENAEEIAAEAEEGKNVAFITLGDPNLYSTFSHLLEYLKC 116

Query: 106 LGIQVKAV 113
             I+V+ V
Sbjct: 117 HDIEVETV 124

Length = 229

>gnl|CDD|233425 TIGR01467, cobI_cbiL, precorrin-2 C20-methyltransferase

 Score = 51.2 bits (123), Expect = 7e-08
 Identities = 39/137 (28%), Positives = 65/137 (47%), Gaps = 20/137 (14%)

Query: 1   MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYGKPIAL 60
            LY +G+G GD   IT++ LEA++  D + + A       G  +     +E  Y KP   
Sbjct: 2   KLYGVGVGPGDPELITVKALEALRSADVIAVPASKK----GRESLARKIVED-YLKPNDT 56

Query: 61  ADREMV--------------EEKADKILSESQES-NVAFLVVGDPFGATTHTDLVVRAKK 105
              E+V              +E A+ + +E +E  +VAFL +GDP   +T + L+ R + 
Sbjct: 57  RILELVFPMTKDRDELEKAWDEAAEAVAAELEEGRDVAFLTLGDPSLYSTFSYLLQRLQG 116

Query: 106 LGIQVKAVHNASVMNAV 122
           +GI+V+ V   +   A 
Sbjct: 117 MGIEVEVVPGITSFAAC 133

This model represents precorrin-2 C20-methyltransferase, one of several closely related S-adenosylmethionine-dependent methyltransferases involved in cobalamin (vitamin B12) biosynthesis [Biosynthesis of cofactors, prosthetic groups, and carriers, Heme, porphyrin, and cobalamin]. Length = 230

>gnl|CDD|223390 COG0313, COG0313, Predicted methyltransferases [General function prediction only]

 Score = 44.5 bits (106), Expect = 2e-05
 Identities = 37/143 (25%), Positives = 62/143 (43%), Gaps = 27/143 (18%)

Query: 1   MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYG---KP 57
            LY++   +G+  DITLR LE +K+ D +  E           T     L    G     
Sbjct: 6   TLYLVPTPIGNLADITLRALEVLKEVDVIAAE----------DTRVTRKLLSHLGIKTPL 55

Query: 58  IALADREMVEEKADKILSE-SQESNVAFL------VVGDPFGATTHTDLVVRAKKLGIQV 110
           I+  +    +EK  K++    +  +VA +      ++ DP G     +LV  A++ GI+V
Sbjct: 56  ISYHEHNE-KEKLPKLIPLLKKGKSVALVSDAGTPLISDP-GY----ELVRAAREAGIRV 109

Query: 111 KAVHNAS-VMNAVGICGLQLYRF 132
             +   S ++ A+   GL   RF
Sbjct: 110 VPLPGPSALITALSASGLPSQRF 132

Length = 275

>gnl|CDD|212503 cd11644, Precorrin-6Y-methylase, Precorrin-6Y methyltransferase, the cobalamin biosynthesis enzyme CbiE

 Score = 43.7 bits (104), Expect = 2e-05
 Identities = 18/94 (19%), Positives = 34/94 (36%), Gaps = 22/94 (23%)

Query: 2  LYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDG----LSTLEKLYGKP 57
          + ++G+G G    +T    EA+++ D +                G    L     L  + 
Sbjct: 1  ITVVGIGPGGPDGLTPAAREAIEEADVLV---------------GGKRHLELFPDLGAEK 45

Query: 58 IALADREMVEEKADKILSESQESNVAFLVVGDPF 91
          I L   ++  E  +++   +    V  L  GDP 
Sbjct: 46 IPLPSDDL-AELLERL--AAAGRRVVVLASGDPL 76

Precorrin-6Y methyltransferase participates in the pathway toward the biosynthesis of cobalamin (vitamin B12). There are two distinct cobalamin biosynthetic pathways in bacteria. The aerobic pathway requires oxygen, and cobalt is inserted late in the pathway; the anaerobic pathway does not requires oxygen, and cobalt insertion is the first committed step towards cobalamin synthesis. This model represents the CbiE subunit of precorrin-6Y C5,15-methyltransferase from the anaerobic pathway, a bifunctional enzyme that catalyzes two methylations (at C-5 and C-15) in precorrin-6Y, as well as the decarboxylation of the acetate side chain located in ring C, in order to generate precorrin-8X. In the anaerobic pathway, two enzymes are required to produce precorrin-8X: CbiE and CbiT, which can be fused as CbiET (sometimes called CobL). In the aerobic pathway, the bifunctional enzyme is called CobL. Length = 201

>gnl|CDD|223942 COG1010, CobJ, Precorrin-3B methylase [Coenzyme metabolism]

 Score = 43.8 bits (104), Expect = 2e-05
 Identities = 30/128 (23%), Positives = 53/128 (41%), Gaps = 19/128 (14%)

Query: 1   MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYGKPIAL 60
            LY++G+G GD   +T     A+++ D   I  YT+ L           +E   GK +  
Sbjct: 4   KLYVVGIGPGDPELMTPEARRALEEAD--VIVGYTTYLDL---------IELRPGKEVIR 52

Query: 61  AD--REMVEEKADKILSESQES-NVAFLVVGDP--FG-ATTHTDLVVRAKKLGIQVKAVH 114
           +    E+  E+A + +  + E  +VA +  GDP  +G A    +         + V+ V 
Sbjct: 53  SGMREEI--ERAKEAIELAAEGRDVALVSSGDPGVYGMAGLVLEAAEEEGWYDVDVEVVP 110

Query: 115 NASVMNAV 122
             +   A 
Sbjct: 111 GVTAALAA 118

Length = 249

>gnl|CDD|212504 cd11645, Precorrin_2_C20_MT, Precorrin-2 C20-methyltransferase, also named CobI or CbiL

 Score = 43.3 bits (103), Expect = 3e-05
 Identities = 29/123 (23%), Positives = 60/123 (48%), Gaps = 11/123 (8%)

Query: 1   MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYGKPIAL 60
            LY +G+G GD   +TL+ +  +++ D + +   +       +   +        + + L
Sbjct: 1   KLYGVGVGPGDPELLTLKAVRILREADVIAV-PGSKAGEGSAALIIVVAYLIPEKEILPL 59

Query: 61  -----ADREMVE----EKADKILSE-SQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQV 110
                 D+E++E    E A +I +E     +VAFL +GDP   +T + L+ R ++ G++V
Sbjct: 60  EFPMTKDKEVLEEAWDEAAAEIAAELEAGKDVAFLTLGDPSLYSTFSYLLRRLREPGVEV 119

Query: 111 KAV 113
           + +
Sbjct: 120 ETI 122

Precorrin-2 C20-methyltransferase participates in the pathway toward the biosynthesis of cobalamin (vitamin B12). There are two distinct cobalamin biosynthetic pathways in bacteria. The aerobic pathway requires oxygen, and cobalt is inserted late in the pathway; the anaerobic pathway does not require oxygen, and cobalt insertion is the first committed step towards cobalamin synthesis. Precorrin-2 C20-methyltransferase catalyzes methylation at the C-20 position of a cyclic tetrapyrrole ring of precorrin-2 using S-adenosylmethionine as a methyl group source to produce precorrin-3A. In the anaerobic pathway, cobalt is inserted into precorrin-2 by CbiK to generate cobalt-precorrin-2, which is the substrate for CbiL, a C20 methyltransferase. In Clostridium difficile, CbiK and CbiL are fused into a bifunctional enzyme. In the aerobic pathway, the precorrin-2 C20-methyltransferase is named CobI. This family includes CbiL and CobI precorrin-2 C20-methyltransferases, both as stand-alone enzymes and when CbiL forms part of a bifunctional enzyme. Length = 226

>gnl|CDD|212510 cd11724, TP_methylase_like, Uncharacterized subfamily of S-AdoMet dependent tetrapyrrole methylases

 Score = 42.3 bits (100), Expect = 7e-05
 Identities = 33/115 (28%), Positives = 50/115 (43%), Gaps = 22/115 (19%)

Query: 2   LYIIGLGLGDERDITLRGLEAVKKCDKVY-----IEAYTSLLSFG-LSTDGLSTLEKLYG 55
           LY++G+G GD  +ITLR LE + K D ++     ++ +   L    +  D         G
Sbjct: 3   LYLVGVGPGDPDNITLRALEVIAKADIIFCPKEIVKRFADYLKGKPVLEDPWKLFWHYGG 62

Query: 56  KPI-----ALADREMVEEKADKILSE---------SQESNVAFLVVGDP--FGAT 94
           KP        + RE  EE+  +   E         +Q  NVA L  GDP  +G +
Sbjct: 63  KPWENLEAEKSPREAFEEEKKRQREEFVKVIREALAQGKNVALLDGGDPTIYGPS 117

TP-methylases use S-AdoMet (S-adenosyl-L-methionine or SAM) in the methylation of diverse substrates. Most members catalyze various methylation steps in cobalamin (vitamin B12) biosynthesis, other members like Diphthine synthase and Ribosomal RNA small subunit methyltransferase I (RsmI) act on other substrates. The function of this subfamily is not known. Length = 255

>gnl|CDD|212509 cd11723, YabN_N, N-terminal S-AdoMet dependent methylase domain of Bacillus subtilis YabN and related proteins

 Score = 41.4 bits (98), Expect = 1e-04
 Identities = 39/144 (27%), Positives = 71/144 (49%), Gaps = 22/144 (15%)

Query: 1   MLYIIGLGLGDERDITLRGLEAVKKCDKVYIE-----AYTSLLSFGLSTDGLSTLEKLYG 55
            + I+GLG GD   +TL    A+K  DK+++          L   G+S     + + +Y 
Sbjct: 1   KITIVGLGPGDPDQLTLGVYRALKAADKIFLRTAIHPVVAELEEEGIS---FESFDSVYE 57

Query: 56  KPIALADR--EMVEEKADKILSESQESNVAFLVVGDPFGATTHTDLVV-RAKKLGIQVKA 112
           +     +   E+  E A+++L E+++ +V + V G P  A     L++ +A+K G++V+ 
Sbjct: 58  E----HETFEEVYREIAEELLEEAKKGDVVYAVPGHPLVAEKTVQLLLEKAEKAGVEVEI 113

Query: 113 VHNAS----VMNAVGI---CGLQL 129
           +   S    +  A+GI    GLQL
Sbjct: 114 LGGQSFLDALFTALGIDPIEGLQL 137

This family contains proteins similar to Bacillus subtilis YabN, which is a fusion of an N-terminal TP-methylase and a C-terminal MazG-type nucleotide pyrophosphohydrolase domain. MazG-like NTP-PPases have been implicated in house-cleaning functions such as degrading abnormal (d)NTPs. TP-methylases use S-AdoMet (S-adenosyl-L-methionine or SAM) in the methylation of diverse substrates. Most members catalyze various methylation steps in cobalamin (vitamin B12) biosynthesis, other members like Diphthine synthase and Ribosomal RNA small subunit methyltransferase I (RsmI) act on other substrates. The specific function of YabN's TP-methylase domain is not known. Length = 220

>gnl|CDD|235609 PRK05787, PRK05787, cobalt-precorrin-6Y C(5)-methyltransferase; Validated

 Score = 41.4 bits (98), Expect = 1e-04
 Identities = 24/95 (25%), Positives = 40/95 (42%), Gaps = 22/95 (23%)

Query: 1  MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLST-LEKLYGKPIA 59
          M+YI+G+G GD   +TL+ LEA++K D V                G    LE      + 
Sbjct: 1  MIYIVGIGPGDPEYLTLKALEAIRKADVVV---------------GSKRVLELF--PELI 43

Query: 60 LADREMV----EEKADKILSESQESNVAFLVVGDP 90
            +  ++     +  + +   ++  NV  L  GDP
Sbjct: 44 DGEAFVLTAGLRDLLEWLELAAKGKNVVVLSTGDP 78

Length = 210

>gnl|CDD|226465 COG3956, COG3956, Protein containing tetrapyrrole methyltransferase domain and MazG-like (predicted pyrophosphatase) domain [General function prediction only]

 Score = 41.8 bits (98), Expect = 2e-04
 Identities = 26/125 (20%), Positives = 55/125 (44%), Gaps = 5/125 (4%)

Query: 1   MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEA--YTSLLSFGLSTDGLSTLEKLYGKPI 58
            + ++GLG GD+  +TL   + +K  D +Y+    +  +          S  + +Y    
Sbjct: 4   TITVVGLGAGDKDQLTLGIYKLLKNQDNLYVRTKDHPVIEELDEEGIKFSFFDDIYETHE 63

Query: 59  ALADREMVEEKADKILSESQESNVAFLVVGDPFGATTHTDLVVRAK-KLGIQVKAVHNAS 117
                 + +  A  ++  ++E ++ + V G P  A     L++ A  K  I+VK +   S
Sbjct: 64  QF--EAVYDFIAADLVEAAKEKDIVYAVPGHPLVAEKTVQLLIEACEKENIKVKILGGQS 121

Query: 118 VMNAV 122
            ++A+
Sbjct: 122 FIDAL 126

Length = 488

>gnl|CDD|225150 COG2241, CobL, Precorrin-6B methylase 1 [Coenzyme metabolism]

 Score = 40.3 bits (95), Expect = 3e-04
 Identities = 24/91 (26%), Positives = 38/91 (41%), Gaps = 11/91 (12%)

Query: 1  MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYGKPIAL 60
          M+ ++G+G G    +TL  +EA+++ D V        L           +   Y      
Sbjct: 1  MITVVGIGPGGPEGLTLAAIEAIRRADVVA--GSKRHLELLPPLIKAERIIWPYPF---- 54

Query: 61 ADREMVEEKADKILSESQESNVAFLVVGDPF 91
           D E +EE    IL+E +  +V  L  GDP 
Sbjct: 55 -DAESLEE----ILAERKGRDVVVLASGDPL 80

Length = 210

>gnl|CDD|233424 TIGR01466, cobJ_cbiH, precorrin-3B C17-methyltransferase

 Score = 38.0 bits (89), Expect = 0.002
 Identities = 29/127 (22%), Positives = 53/127 (41%), Gaps = 17/127 (13%)

Query: 2   LYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYGKPIALA 61
           LY++G+G G E  +T    EA+ + D   I  Y + L        +  L  + GK +  +
Sbjct: 1   LYVVGIGPGAEELMTPEAKEALAEAD--VIVGYKTYLDL------IEDL--IPGKEVVTS 50

Query: 62  DREMVEE--KADKILSESQESN-VAFLVVGDP--FGATTHTDLVVRAKKLGIQVKAVHNA 116
              M EE  +A+  +  + E   VA +  GDP  +G        +  K   + ++ +   
Sbjct: 51  G--MREEIARAELAIELAAEGRTVALVSSGDPGIYGMAALVFEALEKKGAEVDIEVIPGI 108

Query: 117 SVMNAVG 123
           +  +A  
Sbjct: 109 TAASAAA 115

This model represents precorrin-3B C17-methyltransferase, one of two methyltransferases commonly referred to as precorrin-3 methylase (the other is precorrin-4 C11-methyltransferase, EC 2.1.1.133). This enzyme participates in the pathway toward the biosynthesis of cobalamin and related products. Members of this family may appear as fusion proteins with other enzymes of cobalamin biosynthesis [Biosynthesis of cofactors, prosthetic groups, and carriers, Heme, porphyrin, and cobalamin]. Length = 239

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	228
KOG3123	272	consensus Diphthine synthase [Translation, ribosom	100.0
PTZ00175	270	diphthine synthase; Provisional	100.0
COG1798	260	DPH5 Diphthamide biosynthesis methyltransferase [T	100.0
TIGR00522	257	dph5 diphthine synthase. This protein participates	100.0
PRK04160	258	diphthine synthase; Provisional	100.0
COG2875	254	CobM Precorrin-4 methylase [Coenzyme metabolism]	100.0
COG1010	249	CobJ Precorrin-3B methylase [Coenzyme metabolism]	99.97
PRK06136	249	uroporphyrin-III C-methyltransferase; Reviewed	99.97
TIGR01469	236	cobA_cysG_Cterm uroporphyrin-III C-methyltransfera	99.97
PF00590	210	TP_methylase: Tetrapyrrole (Corrin/Porphyrin) Meth	99.97
TIGR01465	229	cobM_cbiF precorrin-4 C11-methyltransferase. This	99.97
PLN02625	263	uroporphyrin-III C-methyltransferase	99.96
COG2243	234	CobF Precorrin-2 methylase [Coenzyme metabolism]	99.96
COG0007	244	CysG Uroporphyrinogen-III methylase [Coenzyme meta	99.96
PRK05990	241	precorrin-2 C(20)-methyltransferase; Reviewed	99.96
PRK15473	257	cbiF cobalt-precorrin-4 C(11)-methyltransferase; P	99.96
PRK05787	210	cobalt-precorrin-6Y C(5)-methyltransferase; Valida	99.96
PRK05948	238	precorrin-2 methyltransferase; Provisional	99.96
PRK05576	229	cobalt-precorrin-2 C(20)-methyltransferase; Valida	99.96
TIGR01467	230	cobI_cbiL precorrin-2 C20-methyltransferase. This	99.95
PRK15478	241	cbiH cobalt-precorrin-3B C(17)-methyltransferase;	99.95
PRK10637	457	cysG siroheme synthase; Provisional	99.95
COG2241	210	CobL Precorrin-6B methylase 1 [Coenzyme metabolism	99.95
TIGR01466	239	cobJ_cbiH precorrin-3B C17-methyltransferase. This	99.95
PRK14994	287	SAM-dependent 16S ribosomal RNA C1402 ribose 2'-O-	99.94
PRK05765	246	precorrin-3B C17-methyltransferase; Provisional	99.94
PRK08284	253	precorrin 6A synthase; Provisional	99.94
PRK07168	474	bifunctional uroporphyrinogen-III methyltransferas	99.94
PRK05991	250	precorrin-3B C17-methyltransferase; Provisional	99.94
TIGR02434	249	CobF precorrin-6A synthase (deacetylating). This m	99.93
TIGR02467	204	CbiE precorrin-6y C5,15-methyltransferase (decarbo	99.93
COG0313	275	Predicted methyltransferases [General function pre	99.86
TIGR00096	276	probable S-adenosylmethionine-dependent methyltran	99.82
KOG1527	506	consensus Uroporphyrin III methyltransferase [Coen	99.82
COG3956	488	Protein containing tetrapyrrole methyltransferase	99.25
COG0391	323	Uncharacterized conserved protein [Function unknow	80.13

>KOG3123 consensus Diphthine synthase [Translation, ribosomal structure and biogenesis]

Probab=100.00  E-value=4.7e-58  Score=374.81  Aligned_cols=223  Identities=69%  Similarity=1.135  Sum_probs=213.0

Q ss_pred             CEEEEecCCCCcchhhHHHHHHHHhCCEEEEeCcccccccCCCcchhhHHhhHhCCCeeecChhhHHHHHHHHHHHcCCC
Q 027097            1 MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYGKPIALADREMVEEKADKILSESQES   80 (228)
Q Consensus         1 ml~iVG~GpG~~~~lT~~A~~~L~~aDvV~~~~~~s~l~~~~~~~~~~~l~~~~~~~i~~~~~~~~e~~~~~i~~~a~~~   80 (228)
                      |+|+||+|.|+..+||+|+++++++|..||.+.|||+++.+.+.    .++++++++++.+||+..|+..+.|++.+...
T Consensus         1 mlYlIGlGL~d~kDITlrGLeaVK~c~rVylEaYTSil~~~l~~----~lEk~yGk~iilADRemvEq~sd~il~~ad~~   76 (272)
T KOG3123|consen    1 MLYLIGLGLGDEKDITLRGLEAVKKCARVYLEAYTSILGVGLDA----TLEKFYGKEIILADREMVEQESDKILDEADKE   76 (272)
T ss_pred             CeEEEeccCCcccceehhhHHHHhhhheehHHHHHHHHHhhhhH----HHHHHhCceeEeccHHHHHhhHHHHhhhhhhc
Confidence            89999999999999999999999999999999999987332222    38899999999999999999999999998889


Q ss_pred             cEEEEecCCCCCcccHHHHHHHHHhCCCcEEEECCCCHHhHHHHhCCccccCCceeEEecccCCCCCCChHHHHHHHhhc
Q 027097           81 NVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNAVGICGLQLYRFGETVSIPFFTETWRPGSFYEKIKRNRSL  160 (228)
Q Consensus        81 ~Va~l~~GDP~~~~~~~~l~~~~~~~gi~v~viPGiSs~~a~a~~Gl~l~~~~~~~~v~~~~~~~~p~~~~~~i~~~~~~  160 (228)
                      +|++|+.||||.++||+.++.++++.|++|+||++.|.++|++++|+++|+||++++++|++++|+|+||||.|++|.+.
T Consensus        77 dVa~LVVGdPfgATTHsDlvlRAk~~~ipv~vIHNASimNavG~CGLqlY~fGetVSiv~ftd~wrP~SfydkI~~Nr~~  156 (272)
T KOG3123|consen   77 DVAFLVVGDPFGATTHSDLVLRAKELGIPVEVIHNASIMNAVGCCGLQLYNFGETVSIVFFTDNWRPESFYDKIKENRQL  156 (272)
T ss_pred             ceEEEEecCcccccchhhhheehhhcCCCeEEEechHHHhhhccceeeeeccCcEEEEEEEccCcCchhHHHHHHHhhhc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCeEEEEecccCCchhHHhhccccccCCCCccCHHHHHHHHHHHHHHhCCCCCCCCcEEEE-Eeccc
Q 027097          161 GLHTLCLLDIRVKEPSLESLCRGKKLYEPPRYMTVNIAIEQLLEVELLQGESGKAHELKIIL-KQLQT  227 (228)
Q Consensus       161 g~~tlvlld~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~ll~~~~~~~~~~~~~~~~~v~-~~~~~  227 (228)
                      |+|||||||++.+||++|+|+||+|+|+|||||++++|++||||+++++++...++||+||. +|+|.
T Consensus       157 glHTLcLLDIkvkEqs~enl~rgrkiyeppRymsvn~a~~QlLei~e~~~~~~~~edT~~v~~~R~Gs  224 (272)
T KOG3123|consen  157 GLHTLCLLDIKVKEQSVENLARGRKIYEPPRYMSVNEAAEQLLEIEEKRGEPAYTEDTLCVAVARVGS  224 (272)
T ss_pred             CceeEEEEEEeeccHHHHHHhccccccCCchhhhHHHHHHHHHHHHHhhCCCCcCCCceEEEEEecCC
Confidence            99999999999999999999999999999999999999999999999999999999999986 88875

>PTZ00175 diphthine synthase; Provisional

Probab=100.00  E-value=1e-54  Score=377.26  Aligned_cols=223  Identities=66%  Similarity=1.055  Sum_probs=202.6

Q ss_pred             CEEEEecCCCCcchhhHHHHHHHHhCCEEEEeCcccccccCCCcchhhHHhhHhCCCeeecChhhHHHHHHHHHHHcCCC
Q 027097            1 MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYGKPIALADREMVEEKADKILSESQES   80 (228)
Q Consensus         1 ml~iVG~GpG~~~~lT~~A~~~L~~aDvV~~~~~~s~l~~~~~~~~~~~l~~~~~~~i~~~~~~~~e~~~~~i~~~a~~~   80 (228)
                      |||+||+|||||++||+||+++|++||+|++|.|+|.+. +...+   .++.+++++....++..+++..+.+++.++++
T Consensus         2 mlylVG~GpGdp~lLTlkal~~L~~ADvV~~d~~ts~l~-~~~~~---~l~~~~gk~~~~~~r~~~e~~~~~ii~~a~~~   77 (270)
T PTZ00175          2 MLYIIGLGLGDEKDITVKGLEAVKSADVVYLESYTSILI-NSNKE---KLEEFYGKPVIEADREMVEEGCDEILEEAKEK   77 (270)
T ss_pred             EEEEEecCCCCHHHHHHHHHHHHHhCCEEEEecccchhc-cCCHH---HHHHhcCCeeEecCccCHHHHHHHHHHHhCCC
Confidence            799999999999999999999999999999999987651 12233   55556676665566667776667788888778


Q ss_pred             cEEEEecCCCCCcccHHHHHHHHHhCCCcEEEECCCCHHhHHHHhCCccccCCceeEEecccCCCCCCChHHHHHHHhhc
Q 027097           81 NVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNAVGICGLQLYRFGETVSIPFFTETWRPGSFYEKIKRNRSL  160 (228)
Q Consensus        81 ~Va~l~~GDP~~~~~~~~l~~~~~~~gi~v~viPGiSs~~a~a~~Gl~l~~~~~~~~v~~~~~~~~p~~~~~~i~~~~~~  160 (228)
                      +|++|++|||++|++|.+++.++++.|+++++|||+|+++|++++|+|+|+||.+++++|++.||+|.++|+.+++|+++
T Consensus        78 ~Vv~L~~GDP~i~~t~~~l~~~~~~~gi~vevIPGvSi~sA~~~~Gl~~~~fg~~~sv~~~t~~~~~~s~~~~i~~n~~~  157 (270)
T PTZ00175         78 NVAFLVVGDPFCATTHTDLYLRAKKKGIEVEVIHNASIMNAIGCTGLQLYRFGETVSIPFFTETWKPDSFYDKIKANRDN  157 (270)
T ss_pred             CEEEEECCCCCccCCHHHHHHHHHHCCCcEEEECCcCHHHHHhhcCCCcCCCCceEEEEEEeCCCCCCChhHHHHHHHHc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCeEEEEecccCCchhHHhhccccccCCCCccCHHHHHHHHHHHHHHhCCCCCCCCcEEEE-Eeccc
Q 027097          161 GLHTLCLLDIRVKEPSLESLCRGKKLYEPPRYMTVNIAIEQLLEVELLQGESGKAHELKIIL-KQLQT  227 (228)
Q Consensus       161 g~~tlvlld~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~ll~~~~~~~~~~~~~~~~~v~-~~~~~  227 (228)
                      |+|||||||++.+|++.+++||+++.|+|+|||++++|+++|++++++..++.++++|++|+ .|+|+
T Consensus       158 glhTl~lldi~~~~~~~~~~~~~~~~~~~~~~M~~~~a~~~l~~i~~~~~~~~~~~~t~~v~v~r~g~  225 (270)
T PTZ00175        158 GLHTLCLLDIKVKERSVENLMKGRKIYEPPRYMTINQAIEQLLEVEEKKGGGVIAEDTLVVGVARVGS  225 (270)
T ss_pred             CCceEEEEeeeccccchhhhhccccccCCCcCCCHHHHHHHHHHHHHHHhcCCCCCCCeEEEEEECCC
Confidence            99999999999999999999999999999999999999999999999999999999998776 58875

>COG1798 DPH5 Diphthamide biosynthesis methyltransferase [Translation, ribosomal structure and biogenesis]

Probab=100.00  E-value=1.1e-51  Score=346.21  Aligned_cols=207  Identities=50%  Similarity=0.790  Sum_probs=192.4

Q ss_pred             CEEEEecCCCCcchhhHHHHHHHHhCCEEEEeCcccccccCCCcchhhHHhhHhCCCeeecChhhHHHHHHHHHHHcCCC
Q 027097            1 MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYGKPIALADREMVEEKADKILSESQES   80 (228)
Q Consensus         1 ml~iVG~GpG~~~~lT~~A~~~L~~aDvV~~~~~~s~l~~~~~~~~~~~l~~~~~~~i~~~~~~~~e~~~~~i~~~a~~~   80 (228)
                      |||+||+|+.|..+||+++++++++||.||++.|||.+ .+.+   ++.++++++++++.++|+.+|+..+.|++.|+++
T Consensus         1 mL~lVGlGL~d~~diTl~gleavr~~d~Vy~E~YTS~~-~~~~---~e~le~~~gkev~~~~R~dlE~~~~~il~~a~~~   76 (260)
T COG1798           1 MLYLVGLGLYDEGDITLKGLEAVRKADRVYAEFYTSIL-LGSN---LEKLEELIGKEVILLDREDLEENSRSILDRAKDK   76 (260)
T ss_pred             CeEEEEeccCccCceeHHHHHHHHhCCEEEEEeeeccc-ccch---HHHHHHHhCCceEeccHHHHhhcchhHHHHHhcC
Confidence            99999999999999999999999999999999999986 2222   3378888999999999999998778899999999


Q ss_pred             cEEEEecCCCCCcccHHHHHHHHHhCCCcEEEECCCCHHhHH-HHhCCccccCCceeEEecccCCCCCCChHHHHHHHhh
Q 027097           81 NVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNAV-GICGLQLYRFGETVSIPFFTETWRPGSFYEKIKRNRS  159 (228)
Q Consensus        81 ~Va~l~~GDP~~~~~~~~l~~~~~~~gi~v~viPGiSs~~a~-a~~Gl~l~~~~~~~~v~~~~~~~~p~~~~~~i~~~~~  159 (228)
                      +|++|+.||||+++||..|+.+++++|++|+||||+|.++|+ +++|++.|+||+++|++|++.+|+|.+|||+|++|+.
T Consensus        77 ~Vall~~GDpmvATTH~~L~~~A~~~Gi~v~vIh~~Si~~Aa~g~tGL~~YkFG~~vTip~~~~~~~p~s~yd~Ik~N~~  156 (260)
T COG1798          77 DVALLVAGDPMVATTHVDLRIEAKRRGIEVRVIHGASIINAAIGLTGLQNYKFGKTVTLPFPSENFFPTSPYDVIKENLE  156 (260)
T ss_pred             CEEEEecCCcceehhHHHHHHHHHHcCCcEEEEcccHHHHHHhhhhhhheeccCCceEecccccCcCCCcHHHHHHHhhh
Confidence            999999999999999999999999999999999999999987 8999999999999999999999999999999999999


Q ss_pred             cCCCeEEEEecccCCchhHHhhccccccCCCCccCHHHHHHHHHHHHHHhCCCCCCCCcEEEE-Eeccc
Q 027097          160 LGLHTLCLLDIRVKEPSLESLCRGKKLYEPPRYMTVNIAIEQLLEVELLQGESGKAHELKIIL-KQLQT  227 (228)
Q Consensus       160 ~g~~tlvlld~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~ll~~~~~~~~~~~~~~~~~v~-~~~~~  227 (228)
                      +|+||++|||++.+                .||||+++|+++|||+|++.+++.+++++++|+ +|+|.
T Consensus       157 ~GLHTl~lLDi~~~----------------~r~Mt~~ea~~~LLe~e~~~~~~~~~~d~~~vvvaR~Gs  209 (260)
T COG1798         157 RGLHTLVLLDIKED----------------ERYMTANEALELLLEAEERRGRGVLTEDTLAVVVARAGS  209 (260)
T ss_pred             cCccceEEEEeccc----------------ccccCHHHHHHHHHHHHHHhcCCCcCCCceEEEEEecCC
Confidence            99999999999965                389999999999999999999999999977665 78763

>TIGR00522 dph5 diphthine synthase

Probab=100.00  E-value=1.8e-42  Score=299.42  Aligned_cols=208  Identities=47%  Similarity=0.760  Sum_probs=179.0

Q ss_pred             CEEEEecCCCCcchhhHHHHHHHHhCCEEEEeCcccccccCCCcchhhHHhhHhCCCeeecChhhHHHHHHHHHHHcCCC
Q 027097            1 MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYGKPIALADREMVEEKADKILSESQES   80 (228)
Q Consensus         1 ml~iVG~GpG~~~~lT~~A~~~L~~aDvV~~~~~~s~l~~~~~~~~~~~l~~~~~~~i~~~~~~~~e~~~~~i~~~a~~~   80 (228)
                      |||+||+|||||++||+||+++|++||+||++.|++.+ .+...   +.++.+.+++.....+..+++..+.+++.++++
T Consensus         1 ~l~~VG~GPGd~~llTl~a~~~L~~advV~~~~~~s~l-~~~~~---~~~~~~~~~~~~~~~~~~~e~~~~~ii~~~~~~   76 (257)
T TIGR00522         1 MLYLIGLGLYDENDISVKGLEAIKKADEVYAEFYTSKL-LGSSI---EEIEEFFGKRVVVLERSDVEENSFRLIERAKSK   76 (257)
T ss_pred             CEEEEECCCCChhhhCHHHHHHHHcCCEEEEeccchhh-ccccH---HHHHHHhCCcccccCHHHHHHHHHHHHHHhcCC
Confidence            89999999999999999999999999999999887654 11112   255555666554444555666667788887668


Q ss_pred             cEEEEecCCCCCcccHHHHHHHHHhCCCcEEEECCCCHHhHH-HHhCCccccCCceeEEecccCCCCCCChHHHHHHHhh
Q 027097           81 NVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNAV-GICGLQLYRFGETVSIPFFTETWRPGSFYEKIKRNRS  159 (228)
Q Consensus        81 ~Va~l~~GDP~~~~~~~~l~~~~~~~gi~v~viPGiSs~~a~-a~~Gl~l~~~~~~~~v~~~~~~~~p~~~~~~i~~~~~  159 (228)
                      +|++|++|||++|+++.+++.++++.|++++|||||||++|+ |++|+|+++||.++++++.+.|++|.++++.+++|+.
T Consensus        77 ~Vv~l~~GDP~i~~~~~~l~~~l~~~~i~vevIPGiSs~~aaaa~~g~~lt~~g~~~~v~~~s~~~~~~~~~~~~~~~l~  156 (257)
T TIGR00522        77 DVALLVAGDPMVATTHTDLKLEAKRKGIETRIIHGASISSAVCGLTGLQLYKFGKTATIVFFTDNYRPQTPYNVIKENRK  156 (257)
T ss_pred             CEEEEECCcCcccCCHHHHHHHHHHCCCeEEEECcHhHHHHHHHHcCCCcccCCCcEEEEEecCCcCCCCHHHHHHHHHh
Confidence            999999999999999999999999999999999999999976 6799999999999999999999998888999999999


Q ss_pred             cCCCeEEEEecccCCchhHHhhccccccCCCCccCHHHHHHHHHHHHHHhCCCCCCCCcEEEE-Eeccc
Q 027097          160 LGLHTLCLLDIRVKEPSLESLCRGKKLYEPPRYMTVNIAIEQLLEVELLQGESGKAHELKIIL-KQLQT  227 (228)
Q Consensus       160 ~g~~tlvlld~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~ll~~~~~~~~~~~~~~~~~v~-~~~~~  227 (228)
                      ++.||+||||++.++               .|||++++++++|++++++..++.++++|++++ .|++.
T Consensus       157 ~~~~Tlvll~~~~~~---------------~~~M~~~~~~~~l~~~~~~l~~~g~~~~tpv~vv~~~~~  210 (257)
T TIGR00522       157 IGLHTLVLLDIHPKE---------------NRAMTIGEGLENLLEEEEKRKTGAITPDTYAVVIARAGS  210 (257)
T ss_pred             cCCCcEEEEecccCc---------------ccccCHHHHHHHHHHHHHHHhhcCCCCCCeEEEEEECCC
Confidence            999999999999754               589999999999999998888888998887666 46553

This protein participates in the modification of a specific His of elongation factor 2 of eukarotes and Archaea to diphthamide. The protein was characterized in Saccharomyces cerevisiae and designated DPH5.

>PRK04160 diphthine synthase; Provisional

Probab=100.00  E-value=2.8e-34  Score=248.43  Aligned_cols=207  Identities=50%  Similarity=0.771  Sum_probs=166.7

Q ss_pred             CEEEEecCCCCcchhhHHHHHHHHhCCEEEEeCcccccccCCCcchhhHHhhHhCCCeeecChhhHHHHHHHHH-HHcCC
Q 027097            1 MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYGKPIALADREMVEEKADKIL-SESQE   79 (228)
Q Consensus         1 ml~iVG~GpG~~~~lT~~A~~~L~~aDvV~~~~~~s~l~~~~~~~~~~~l~~~~~~~i~~~~~~~~e~~~~~i~-~~a~~   79 (228)
                      |||+||+|||||++||+||+++|++||+|+++.+++..    ..+.++.+..+.+++....++..+++..+.++ +.+++
T Consensus         1 ~l~vVG~GpG~pd~lT~~a~~~L~~advv~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   76 (258)
T PRK04160          1 MLYFIGLGLYDERDITLKGLEALRNADKVYAEFYTSIL----MGTTIEKLEELIGKEIIVLDREDVEQESEKIILEEAKE   76 (258)
T ss_pred             CEEEEECCCCChhhhCHHHHHHHHcCCEEEEecccCcc----ccccHHHHHHHhCCceeecCHHHHHHHHHHHHHHHHcC
Confidence            89999999999999999999999999999998775432    12223345555445433334555666666555 55556


Q ss_pred             CcEEEEecCCCCCcccHHHHHHHHHhCCCcEEEECCCCHHhHH-HHhCCccccCCceeEEecccCCCCCCChHHHHHHHh
Q 027097           80 SNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNAV-GICGLQLYRFGETVSIPFFTETWRPGSFYEKIKRNR  158 (228)
Q Consensus        80 ~~Va~l~~GDP~~~~~~~~l~~~~~~~gi~v~viPGiSs~~a~-a~~Gl~l~~~~~~~~v~~~~~~~~p~~~~~~i~~~~  158 (228)
                      ++|++|++|||++|+++.+++..+++.|++++|+|||||++++ |++|+|+++||.+.++.+.+.++.+..+++.+++++
T Consensus        77 ~~Vv~L~sGDP~~ys~~~~l~~~l~~~~~~veviPGISS~~aaaa~~g~~~~~~g~~~s~~~~~~~~~~~~~~~~i~~~~  156 (258)
T PRK04160         77 KNVAFLTAGDPMVATTHVDLRLEAKKRGIEVRVIHGVSIYSAAISLTGLQNYKFGKSVTVPFPYGNFFPESPYDVIKDNL  156 (258)
T ss_pred             CCEEEEeCCCCccccCHHHHHHHHHHCCCcEEEECChhHHHHHHHHhCCCcccCCceEEEccCcCCcCCCCHHHHHHHHH
Confidence            8999999999999999999999999999999999999999975 689999999999999988777776666788899999


Q ss_pred             hcCCCeEEEEecccCCchhHHhhccccccCCCCccCHHHHHHHHHHHHHHhCCCCCCCCc-EEEEEeccc
Q 027097          159 SLGLHTLCLLDIRVKEPSLESLCRGKKLYEPPRYMTVNIAIEQLLEVELLQGESGKAHEL-KIILKQLQT  227 (228)
Q Consensus       159 ~~g~~tlvlld~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~ll~~~~~~~~~~~~~~~-~~v~~~~~~  227 (228)
                      ..+.+|+++++...+                .++|+++.++++|++++++..+|...+++ ++|+.+++.
T Consensus       157 ~~~~~~~vll~~~~~----------------~~~~~~~~~~~~L~~~~~~l~~g~~~~~~~v~V~e~l~~  210 (258)
T PRK04160        157 ERGLHTLVLLDIKAD----------------GRYMTANEALELLLELEEKRGEGVISEDTLAVVVARAGS  210 (258)
T ss_pred             hcCCCcEEEEEeccC----------------CcccCHHHHHHHHHHHHHHhcccccCCCCEEEEEEecCC
Confidence            999999999987643                46799999999999998888888776665 455566653

>COG2875 CobM Precorrin-4 methylase [Coenzyme metabolism]

Probab=100.00  E-value=1e-32  Score=229.58  Aligned_cols=214  Identities=23%  Similarity=0.268  Sum_probs=175.0

Q ss_pred             CEEEEecCCCCcchhhHHHHHHHHhCCEEEEeCcccccccCCCcchhhHHhhHh-CCCeeecChhhHHHHHHHHHHHcCC
Q 027097            1 MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLY-GKPIALADREMVEEKADKILSESQE   79 (228)
Q Consensus         1 ml~iVG~GpG~~~~lT~~A~~~L~~aDvV~~~~~~s~l~~~~~~~~~~~l~~~~-~~~i~~~~~~~~e~~~~~i~~~a~~   79 (228)
                      ++||||.||||||+||+|+.++|++||+|+|.++   |   ++++   .|+.+. +.+++-.....++++.+.+.+..++
T Consensus         4 ~VyFIGAGPGdpdLiTvkg~~ll~~advviYAGS---L---V~~e---lL~~~~~~aei~nSa~~tLeeIi~~m~~a~~~   74 (254)
T COG2875           4 KVYFIGAGPGDPDLITVKGQRLLEKADVVIYAGS---L---VPPE---LLEYCRPDAEIVNSASLTLEEIIDLMVDAVRE   74 (254)
T ss_pred             eEEEEccCCCCcceeeehHHHHHhhCCEEEECCC---c---CCHH---HHhhcCCCCEEEecCcCCHHHHHHHHHHHHHc
Confidence            4899999999999999999999999999999985   2   4566   665443 4455544445688888888888777


Q ss_pred             -CcEEEEecCCCCCcccHHHHHHHHHhCCCcEEEECCCCHHhHH-HHhCCccccCCceeEEecccCCCC-CCChHHHHHH
Q 027097           80 -SNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNAV-GICGLQLYRFGETVSIPFFTETWR-PGSFYEKIKR  156 (228)
Q Consensus        80 -~~Va~l~~GDP~~~~~~~~l~~~~~~~gi~v~viPGiSs~~a~-a~~Gl~l~~~~~~~~v~~~~~~~~-p~~~~~~i~~  156 (228)
                       |+|++|.+|||.+|+...+.++++++.||+++++||||||.|+ |.+|..++..+.+.++++.+..++ |.+..|.+.+
T Consensus        75 Gk~VvRLhSGDpsiYgA~~EQm~~L~~~gI~yevvPGVss~~AAAA~L~~ELT~P~vsQtvilTR~sgrt~vpe~e~l~~  154 (254)
T COG2875          75 GKDVVRLHSGDPSIYGALAEQMRELEALGIPYEVVPGVSSFAAAAAALGIELTVPGVSQTVILTRPSGRTPVPEKESLAA  154 (254)
T ss_pred             CCeEEEeecCChhHHHHHHHHHHHHHHcCCCeEEeCCchHHHHHHHHhCceeecCCcceeEEEEccccCCCCCchhHHHH
Confidence             9999999999999999999999999999999999999999975 569999999999999998887776 5556788888


Q ss_pred             HhhcCCCeEEEEecccCCchhHHhhccccccCCCC--------ccCHHH-HHHHHHHHHHHhCCCCCCCCcEEEEEec
Q 027097          157 NRSLGLHTLCLLDIRVKEPSLESLCRGKKLYEPPR--------YMTVNI-AIEQLLEVELLQGESGKAHELKIILKQL  225 (228)
Q Consensus       157 ~~~~g~~tlvlld~~~~~~~~~~l~~~~~~~~~~~--------~~~~~~-a~~~ll~~~~~~~~~~~~~~~~~v~~~~  225 (228)
                      ..+++....+||.+...++..+.|..+  .|.|+.        .|+=.+ ....|.++++++++..+..+++++||..
T Consensus       155 la~~~aTm~I~L~v~~I~~vv~~L~~g--~y~~dtPVaVV~rAsWpDe~ii~GTL~dIa~kv~~~~i~rTAlIiVG~~  230 (254)
T COG2875         155 LAKHGATMVIFLGVHAIDKVVEELLEG--GYPPDTPVAVVYRASWPDEKIIRGTLEDIAEKVKEAGIRRTALIIVGDV  230 (254)
T ss_pred             HHhcCceeEeeehhhHHHHHHHHHhcC--CCCCCCCEEEEEecCCCcccEEEeeHHHHHHHHHhcCceeEEEEEEccc
Confidence            888887777789999888888888874  244331        232222 2467888899999899999999999874

>COG1010 CobJ Precorrin-3B methylase [Coenzyme metabolism]

Probab=99.97  E-value=1.4e-30  Score=217.41  Aligned_cols=183  Identities=22%  Similarity=0.258  Sum_probs=147.2

Q ss_pred             CEEEEecCCCCcchhhHHHHHHHHhCCEEEEeCcccccccCCCcchhhHHhhHhCCCeeecChhhHHHHHHHHHHHcCC-
Q 027097            1 MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYGKPIALADREMVEEKADKILSESQE-   79 (228)
Q Consensus         1 ml~iVG~GpG~~~~lT~~A~~~L~~aDvV~~~~~~s~l~~~~~~~~~~~l~~~~~~~i~~~~~~~~e~~~~~i~~~a~~-   79 (228)
                      |||+||+|||+++++|++|.++|++||+|+  +|+.++      +   .++...+++++..+....-+.++..++.+++ 
T Consensus         4 ~L~VVGiGPG~~~~mT~~A~~al~~ad~iv--GY~~Y~------d---~i~l~~~k~v~~s~m~~Ei~Ra~~AielA~~G   72 (249)
T COG1010           4 KLYVVGIGPGDPELMTPEARRALEEADVIV--GYTTYL------D---LIELRPGKEVIRSGMREEIERAKEAIELAAEG   72 (249)
T ss_pred             eEEEEEeCCCChhhCCHHHHHHHHhCCEEE--ecHHHH------H---HHhcCCCCEEEeCCcHhHHHHHHHHHHHHhcC
Confidence            699999999999999999999999999999  887775      1   4552235666654322222456778888888 


Q ss_pred             CcEEEEecCCCCCcccHHHHHHHHHhC---CCcEEEECCCCHHhHH-HHhCCccccCCceeEEecccCCCCCCChHHHHH
Q 027097           80 SNVAFLVVGDPFGATTHTDLVVRAKKL---GIQVKAVHNASVMNAV-GICGLQLYRFGETVSIPFFTETWRPGSFYEKIK  155 (228)
Q Consensus        80 ~~Va~l~~GDP~~~~~~~~l~~~~~~~---gi~v~viPGiSs~~a~-a~~Gl~l~~~~~~~~v~~~~~~~~p~~~~~~i~  155 (228)
                      ++||++++|||.+|+...-.++.+.+.   +++++|+||||+++|+ |++|.|+.+..   .++..|+++.|   |+.|+
T Consensus        73 ~~ValVSsGDpgVYgMA~lv~E~~~~~~~~~v~veVvPGvTA~~aaAa~lGAPL~hDF---~~ISLSDlLtP---we~Ie  146 (249)
T COG1010          73 RDVALVSSGDPGVYGMAGLVLEAAEEEGWYDVDVEVVPGVTAALAAAARLGAPLGHDF---CVISLSDLLTP---WEVIE  146 (249)
T ss_pred             CeEEEEeCCCccHHHhHHHHHHHHHhcCCCCccEEEeCChHHHHHHHHHhCCCcccce---EEEEhHhcCCc---HHHHH
Confidence            899999999999999997777777655   4999999999999976 56999997644   55556899876   88888


Q ss_pred             HHhhc---CCCeEEEEecccCCchhHHhhccccccCCCCccCHHHHHHHHHHHHHHhCCCCCCCCcEEEEEe
Q 027097          156 RNRSL---GLHTLCLLDIRVKEPSLESLCRGKKLYEPPRYMTVNIAIEQLLEVELLQGESGKAHELKIILKQ  224 (228)
Q Consensus       156 ~~~~~---g~~tlvlld~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~ll~~~~~~~~~~~~~~~~~v~~~  224 (228)
                      +.+..   ....++|++...+                .|.++..+|.++|++        +.+++|++.+.|
T Consensus       147 kRl~aAA~adfVi~~YNP~s~----------------~R~~~~~~a~eil~~--------~r~~~tpVgivr  194 (249)
T COG1010         147 KRLRAAAEADFVIALYNPISK----------------RRPEQLGRAFEILRE--------HRSPDTPVGIVR  194 (249)
T ss_pred             HHHHHHhhCCEEEEEECCccc----------------cchHHHHHHHHHHHH--------hcCCCCcEEEEe
Confidence            87765   5678899998865                477899999999999        778888888765

>PRK06136 uroporphyrin-III C-methyltransferase; Reviewed

Probab=99.97  E-value=8.4e-30  Score=218.85  Aligned_cols=162  Identities=22%  Similarity=0.248  Sum_probs=123.0

Q ss_pred             CEEEEecCCCCcchhhHHHHHHHHhCCEEEEeCcccccccCCCcchhhHHhhHh-CCCeeec------ChhhHHHHHHHH
Q 027097            1 MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLY-GKPIALA------DREMVEEKADKI   73 (228)
Q Consensus         1 ml~iVG~GpG~~~~lT~~A~~~L~~aDvV~~~~~~s~l~~~~~~~~~~~l~~~~-~~~i~~~------~~~~~e~~~~~i   73 (228)
                      |||+||+|||||++||+||+++|++||+|+++.+++       .+   .++.+. +++....      ....+++..+.+
T Consensus         4 ~l~iVGvGpGdp~~lT~~A~~~L~~advI~~~~~~~-------~~---~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i   73 (249)
T PRK06136          4 KVYLVGAGPGDPDLITLKGVRLLEQADVVLYDDLVS-------PE---ILAYAKPDAELIYVGKRAGRHSTKQEEINRLL   73 (249)
T ss_pred             EEEEEEECCCChHHHHHHHHHHHhcCCEEEEcCCCC-------HH---HHhhCCCCCEEEeCCCcCCCCCcCHHHHHHHH
Confidence            599999999999999999999999999999876421       22   222111 1122111      112234455666


Q ss_pred             HHHcCC-CcEEEEecCCCCCcccHHHHHHHHHhCCCcEEEECCCCHHhHH-HHhCCccccCCceeEEecccCCCCCCChH
Q 027097           74 LSESQE-SNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNAV-GICGLQLYRFGETVSIPFFTETWRPGSFY  151 (228)
Q Consensus        74 ~~~a~~-~~Va~l~~GDP~~~~~~~~l~~~~~~~gi~v~viPGiSs~~a~-a~~Gl~l~~~~~~~~v~~~~~~~~p~~~~  151 (228)
                      .+.+.+ ++||+|++|||++|+++.++++++++.|++++|||||||++++ |++|+||++++++.++.+.+.|.++.+..
T Consensus        74 ~~~~~~g~~V~~l~~GDP~~ys~~~~l~~~l~~~~~~veviPGISS~~aaaa~~g~~l~~~~~~~~~~~~~~~~~~~~~~  153 (249)
T PRK06136         74 VDYARKGKVVVRLKGGDPFVFGRGGEELEALEAAGIPYEVVPGITAAIAAAAYAGIPLTHRGVARSVTFVTGHEAAGKLE  153 (249)
T ss_pred             HHHHHCCCeEEEEeCCCchhhhcHHHHHHHHHHCCCCEEEEcCccHHHHHHHHcCCCcccCCcceeEEEEecccCCCccc
Confidence            666655 8999999999999999999999999889999999999999975 67999999999888888888888765433


Q ss_pred             -HHHHHHhhcCCCeEEEEeccc
Q 027097          152 -EKIKRNRSLGLHTLCLLDIRV  172 (228)
Q Consensus       152 -~~i~~~~~~g~~tlvlld~~~  172 (228)
                       ...++++..+.+|+++++...
T Consensus       154 ~~~~~~~l~~~~~~~vl~~~~~  175 (249)
T PRK06136        154 PEVNWSALADGADTLVIYMGVR  175 (249)
T ss_pred             cccCHHHHhCCCCeEEEECCHH
Confidence             223466677779999987663

>TIGR01469 cobA_cysG_Cterm uroporphyrin-III C-methyltransferase

Probab=99.97  E-value=3.3e-29  Score=213.36  Aligned_cols=162  Identities=22%  Similarity=0.227  Sum_probs=120.7

Q ss_pred             CEEEEecCCCCcchhhHHHHHHHHhCCEEEEeCcccccccCCCcchhhHHhhHh-CCCeeec------ChhhHHHHHHHH
Q 027097            1 MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLY-GKPIALA------DREMVEEKADKI   73 (228)
Q Consensus         1 ml~iVG~GpG~~~~lT~~A~~~L~~aDvV~~~~~~s~l~~~~~~~~~~~l~~~~-~~~i~~~------~~~~~e~~~~~i   73 (228)
                      .||+||+|||||++||++|+++|++||+|+++.+++       .+   .++.+. +.+....      ....+++..+.+
T Consensus         1 ~i~iVG~GpG~~~~lT~~a~~~l~~advI~~~~~~~-------~~---~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i   70 (236)
T TIGR01469         1 KVYLVGAGPGDPELLTLKALRLLQEADVVLYDALVS-------PE---ILAYAPPQAELIDVGKRPGCHSKKQEEINRLL   70 (236)
T ss_pred             CEEEEecCCCChHHhHHHHHHHHHhCCEEEEeCCCC-------HH---HHhhCCCCCEEEeCCCCCCCCCCCHHHHHHHH
Confidence            489999999999999999999999999999876432       22   222111 1122211      112355566666


Q ss_pred             HHHcCC-CcEEEEecCCCCCcccHHHHHHHHHhCCCcEEEECCCCHHhHH-HHhCCccccCCceeEEecccCCCCCCChH
Q 027097           74 LSESQE-SNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNAV-GICGLQLYRFGETVSIPFFTETWRPGSFY  151 (228)
Q Consensus        74 ~~~a~~-~~Va~l~~GDP~~~~~~~~l~~~~~~~gi~v~viPGiSs~~a~-a~~Gl~l~~~~~~~~v~~~~~~~~p~~~~  151 (228)
                      .+.+++ ++|+++++|||++|+++.++++++.+.|++++++|||||++++ |++|+||++++.+.++.+.+.|+++.+..
T Consensus        71 ~~~~~~g~~V~~l~~GDP~~~~~~~~l~~~~~~~~~~v~viPGiSs~~~a~a~~g~~l~~~~~~~~~~i~~~~~~~~~~~  150 (236)
T TIGR01469        71 VELAREGKKVVRLKGGDPFVFGRGGEEAEALAEAGIPFEVVPGVTSAIAAAAYAGIPLTHRGVASSVTFVTGHEADDKAL  150 (236)
T ss_pred             HHHHHCCCeEEEEeCcCcccccCHHHHHHHHHHCCCCEEEECCccHHHHHHHHcCCCcccCCCcceEEEEEcccCCCccc
Confidence            666655 8999999999999999999999999889999999999999975 68999999988755666667787765432


Q ss_pred             HHHHHHhhcCCCeEEEEeccc
Q 027097          152 EKIKRNRSLGLHTLCLLDIRV  172 (228)
Q Consensus       152 ~~i~~~~~~g~~tlvlld~~~  172 (228)
                      ...++++..+.+|+++++...
T Consensus       151 ~~~~~~~~~~~~~~vl~~~~~  171 (236)
T TIGR01469       151 EVDWEALAKGAGTLVIYMGVR  171 (236)
T ss_pred             ccCHHHHhcCCCeEEEECCHH
Confidence            222456667778999987543

This model represents enzymes, or enzyme domains, with uroporphyrin-III C-methyltransferase activity. This enzyme catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). Cobalamin contains cobalt while siroheme contains iron. Siroheme is a cofactor for nitrite and sulfite reductases and therefore plays a role in cysteine biosynthesis; many members of this family are CysG, siroheme synthase, with an additional N-terminal domain and with additional oxidation and iron insertion activities.

>PF00590 TP_methylase: Tetrapyrrole (Corrin/Porphyrin) Methylases Note this Prosite entry does not include all members of this family

Probab=99.97  E-value=8.6e-29  Score=206.55  Aligned_cols=183  Identities=30%  Similarity=0.294  Sum_probs=133.4

Q ss_pred             CEEEEecCCCCcchhhHHHHHHHHhCCEEEEeCcccccccCCCcchhhHHhhHhC------CCeeecChhhHHHHHHHH-
Q 027097            1 MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYG------KPIALADREMVEEKADKI-   73 (228)
Q Consensus         1 ml~iVG~GpG~~~~lT~~A~~~L~~aDvV~~~~~~s~l~~~~~~~~~~~l~~~~~------~~i~~~~~~~~e~~~~~i-   73 (228)
                      |||+||+|||||++||++|+++|++||+|+++..           +.+.+..+..      +.... ....+++..+.+ 
T Consensus         1 ~l~iVG~GpG~~~~lT~~a~~~l~~advv~~~~r-----------~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~i~   68 (210)
T PF00590_consen    1 KLYIVGLGPGDPDLLTLRALEALKNADVVIGPER-----------ALEIVRDLLPEIFPMGKDRES-LEESYDEIAEIIE   68 (210)
T ss_dssp             EEEEEEEBSSSGGGSBHHHHHHHHHSSEEEEETT-----------CHHHHHHHHHTEETTSSEEEE-EHHHHHHHHHHHH
T ss_pred             CEEEEecCCCCHHHHHHHHHHHHHhCCccccccc-----------chHHHHhhccccccccccccc-hhhhhhHHHHHHH
Confidence            8999999999999999999999999999998763           1224444421      11111 134466777777 


Q ss_pred             -HHHcCC-CcEEEEecCCCCCcccHHHHHHHHHh--CCCcEEEECCCCHHhHH-HHhCCccccCCceeEEecccCCCCC-
Q 027097           74 -LSESQE-SNVAFLVVGDPFGATTHTDLVVRAKK--LGIQVKAVHNASVMNAV-GICGLQLYRFGETVSIPFFTETWRP-  147 (228)
Q Consensus        74 -~~~a~~-~~Va~l~~GDP~~~~~~~~l~~~~~~--~gi~v~viPGiSs~~a~-a~~Gl~l~~~~~~~~v~~~~~~~~p-  147 (228)
                       .+.+++ ++|+++++|||++|+++.++++.+++  .|++++++|||||++++ |++|+||++++....+.     .++ 
T Consensus        69 ~~~~~~~g~~V~~l~~GDP~~~~~~~~l~~~l~~~~~gi~v~iiPGiSs~~~a~a~~g~~~~~~~~~~~~~-----~~~~  143 (210)
T PF00590_consen   69 AIEAAKEGKDVVVLVSGDPLFFSTGSYLVRALRAEERGIEVEIIPGISSFQAAAARLGIPLTDGGFISLHG-----LRDL  143 (210)
T ss_dssp             HHHHHHTTSEEEEEESBSTTSSSSHHHHHHHHHHHHTTCEEEEE--TTHHHHHHHHCTSTSSBTTTBEEEE-----TSSS
T ss_pred             HHHHHhccCCEEEeCCCCCCcccHHHHHHHHHHhhcCCCceEEEecCcHHHHHHHHHcCCcccCcEEEEEE-----eccc
Confidence             677766 88999999999999999999999888  99999999999999975 68999999988777665     111 


Q ss_pred             CChHHHHHHHhhcCCCeEEEEecccCCchhHHhhccccccCCCCccCHHHHHHHHHHHHHHhCCCCCCCCcEEEEEeccc
Q 027097          148 GSFYEKIKRNRSLGLHTLCLLDIRVKEPSLESLCRGKKLYEPPRYMTVNIAIEQLLEVELLQGESGKAHELKIILKQLQT  227 (228)
Q Consensus       148 ~~~~~~i~~~~~~g~~tlvlld~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~ll~~~~~~~~~~~~~~~~~v~~~~~~  227 (228)
                      .........++..+.+|+++|...                     .++.+.++.|++.  .    .-....++|+.|+++
T Consensus       144 ~~~~~~~l~~~~~~~~~~vil~~~---------------------~~~~~i~~~L~~~--~----~~~~~~v~v~~~lg~  196 (210)
T PF00590_consen  144 DTEREKLLENLLANGDTLVILTDP---------------------RRLAEIAELLLER--L----YPPDTPVAVGERLGY  196 (210)
T ss_dssp             SHHHHHHHHHHHTTTSEEEEEESG---------------------CCHHHHHHHHHHH--S----HTTTSEEEEEESTTS
T ss_pred             ccchHHHHHHHHhCCCEEEEEccC---------------------chHHHHHHHHHhh--C----CCCCcEEEHHHhcCC
Confidence            112345666777778999998654                     1588888888773  0    011135666677764

; InterPro: IPR000878 Tetrapyrroles are large macrocyclic compounds derived from a common biosynthetic pathway []. The end-product, uroporphyrinogen III, is used to synthesise a number of important molecules, including cobalamin (vitamin B12), haem, sirohaem, chlorophyll, coenzyme F430 and phytochromobilin []. This entry represents several tetrapyrrole methylases, which consist of two non-similar domains. These enzymes catalyse the methylation of their substrates using S-adenosyl-L-methionine as a methyl source. Enzymes in this family include: Uroporphyrinogen III methyltransferase (2.1.1.107 from EC) (SUMT), which catalyses the conversion of uroporphyrinogen III to precorrin-2 at the first branch-point of the tetrapyrrole synthesis pathway, directing the pathway towards cobalamin or sirohaem synthesis []. Precorrin-2 C20-methyltransferase CobI/CbiL (2.1.1.130 from EC), which introduces a methyl group at C-20 on precorrin-2 to produce precorrin-3A during cobalamin biosynthesis. This reaction is key to the conversion of a porphyrin-type tetrapyrrole ring to a corrin ring []. In some species, this enzyme is part of a bifunctional protein. Precorrin-4 C11-methyltransferase CobM/CbiF (2.1.1.133 from EC), which introduces a methyl group at C-11 on precorrin-4 to produce precorrin-5 during cobalamin biosynthesis []. Sirohaem synthase CysG (2.1.1.107 from EC), domains 4 and 5, which synthesizes sirohaem from uroporphyrinogen III, at the first branch-point in the tetrapyrrole biosynthetic pathway, directing the pathway towards sirohaem synthesis []. Diphthine synthase (2.1.1.98 from EC), which carries out the methylation step during the modification of a specific histidine residue of elongation factor 2 (EF-2) during diphthine synthesis. ; GO: 0008168 methyltransferase activity, 0008152 metabolic process; PDB: 2ZVC_A 2ZVB_A 1WDE_A 3ND1_A 2E0K_A 2E0N_B 1VA0_B 1V9A_A 3I4T_A 3NDC_B ....

>TIGR01465 cobM_cbiF precorrin-4 C11-methyltransferase

Probab=99.97  E-value=9.1e-29  Score=209.84  Aligned_cols=160  Identities=21%  Similarity=0.198  Sum_probs=119.1

Q ss_pred             EEEEecCCCCcchhhHHHHHHHHhCCEEEEeCcccccccCCCcchhhHHhhHh-CCCeeecChhhHHHHHHHHHHHcCC-
Q 027097            2 LYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLY-GKPIALADREMVEEKADKILSESQE-   79 (228)
Q Consensus         2 l~iVG~GpG~~~~lT~~A~~~L~~aDvV~~~~~~s~l~~~~~~~~~~~l~~~~-~~~i~~~~~~~~e~~~~~i~~~a~~-   79 (228)
                      +|+||+|||||++||+||+++|++||+|++++..      ...+   .++.+. ++++.......+++..+.+.+.+++ 
T Consensus         1 v~iVG~GpG~~~~lT~~a~~~l~~advV~~~~~~------~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~g   71 (229)
T TIGR01465         1 VYFIGAGPGDPDLITVKGRKLLESADVILYAGSL------VPPE---LLAWCRPGAEVVNSAGMSLEEIVDIMSDAHREG   71 (229)
T ss_pred             CEEEEeCCCCcHHHHHHHHHHHHhCCEEEEeCCC------CCHH---HHhhCCCCCEEEEcCCCCHHHHHHHHHHHHHCC
Confidence            6899999999999999999999999999986531      1112   233222 2233322123466677777776665 


Q ss_pred             CcEEEEecCCCCCcccHHHHHHHHHhCCCcEEEECCCCHHhHH-HHhCCccccCCceeEEecccCCCCCC-ChHHHHHHH
Q 027097           80 SNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNAV-GICGLQLYRFGETVSIPFFTETWRPG-SFYEKIKRN  157 (228)
Q Consensus        80 ~~Va~l~~GDP~~~~~~~~l~~~~~~~gi~v~viPGiSs~~a~-a~~Gl~l~~~~~~~~v~~~~~~~~p~-~~~~~i~~~  157 (228)
                      ++|++|++|||++|+++.++++.+++.|++++|+|||||++++ |++|+||+.++.+.++.+.+.|+++. ...+.+. .
T Consensus        72 ~~V~~L~~GDP~~~~~~~~l~~~~~~~g~~veviPGiSS~~aa~a~~g~~l~~~~~~~~~~~~~~~g~~~~~~~~~l~-~  150 (229)
T TIGR01465        72 KLVVRLHTGDPSIYGAIAEQMQLLEALGIPYEVVPGVSSFFAAAAALGAELTVPEVSQTVILTRAEGRTPMPEGEKLA-D  150 (229)
T ss_pred             CeEEEEeCcCccccccHHHHHHHHHHCCCCEEEECChhHHHHHHHHcCCCccccCCccEEEEEeccCCCCCCChHHHH-H
Confidence            7999999999999999999999999999999999999999976 67999999999888888888887632 2223343 3


Q ss_pred             hhcCCCeEEEEecc
Q 027097          158 RSLGLHTLCLLDIR  171 (228)
Q Consensus       158 ~~~g~~tlvlld~~  171 (228)
                      +.....++++|...
T Consensus       151 ~~~~~~~~vi~~~~  164 (229)
T TIGR01465       151 LAKHGATMAIFLSA  164 (229)
T ss_pred             HhcCCCeEEEECcH
Confidence            33444677776554

This model represents precorrin-4 C11-methyltransferase, one of two methyltransferases commonly referred to as precorrin-3 methylase (the other is precorrin-3B C17-methyltransferase, EC 2.1.1.131). This enzyme participates in the pathway toward the biosynthesis of cobalamin and related products.

>PLN02625 uroporphyrin-III C-methyltransferase

Probab=99.96  E-value=1.4e-28  Score=213.43  Aligned_cols=161  Identities=23%  Similarity=0.258  Sum_probs=120.3

Q ss_pred             CEEEEecCCCCcchhhHHHHHHHHhCCEEEEeCcccccccCCCcchhhHHhhHh-CCCeee------cChhhHHHHHHHH
Q 027097            1 MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLY-GKPIAL------ADREMVEEKADKI   73 (228)
Q Consensus         1 ml~iVG~GpG~~~~lT~~A~~~L~~aDvV~~~~~~s~l~~~~~~~~~~~l~~~~-~~~i~~------~~~~~~e~~~~~i   73 (228)
                      +||+||+|||||++||++|+++|++||+|+++.+.+       .+   .++.+. +++...      .....+++..+.+
T Consensus        16 ~l~vVG~GpGdp~~LTl~a~~~l~~ADvI~~~~~~~-------~~---~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i   85 (263)
T PLN02625         16 NVFLVGTGPGDPDLLTLKALRLLQTADVVLYDRLVS-------PD---ILDLVPPGAELLYVGKRGGYHSRTQEEIHELL   85 (263)
T ss_pred             EEEEEEeCCCChHHhHHHHHHHHhcCCEEEEeCcCC-------HH---HHHhcCCCCEEEecCCcCCccccCHHHHHHHH
Confidence            589999999999999999999999999999876522       22   222121 122211      1112355666667


Q ss_pred             HHHcCC-CcEEEEecCCCCCcccHHHHHHHHHhCCCcEEEECCCCHHhHH-HHhCCccccCCceeEEecccCCCCCCChH
Q 027097           74 LSESQE-SNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNAV-GICGLQLYRFGETVSIPFFTETWRPGSFY  151 (228)
Q Consensus        74 ~~~a~~-~~Va~l~~GDP~~~~~~~~l~~~~~~~gi~v~viPGiSs~~a~-a~~Gl~l~~~~~~~~v~~~~~~~~p~~~~  151 (228)
                      .+.+.+ ++|++|++|||++|+++.++++.+++.|++++|||||||++++ |++|+||++.+...++.+.+.|+++.+..
T Consensus        86 ~~~~~~g~~Vvvl~~GDP~~ys~~~~l~~~l~~~~~~veiiPGISS~~aaaA~lg~pl~~~~~~~~~~i~s~h~~~~~~~  165 (263)
T PLN02625         86 LSFAEAGKTVVRLKGGDPLVFGRGGEEMDALRKNGIPVTVVPGITAAIGAPAELGIPLTHRGVATSVRFLTGHDREGGTD  165 (263)
T ss_pred             HHHHHCCCeEEEEcCCCchhhhhHHHHHHHHHHCCCCEEEECCccHHHHHHHHcCCCcccCCccceEEEEecccCCCccc
Confidence            676655 8999999999999999999999999999999999999999975 68999999877666666677888754322


Q ss_pred             H-HHHHHhhcCCCeEEEEecc
Q 027097          152 E-KIKRNRSLGLHTLCLLDIR  171 (228)
Q Consensus       152 ~-~i~~~~~~g~~tlvlld~~  171 (228)
                      + ...+.+..+.+|++++...
T Consensus       166 ~~~~~~~~~~~~~t~vl~~~~  186 (263)
T PLN02625        166 PLDVAEAAADPDTTLVVYMGL  186 (263)
T ss_pred             chhhHHHHhCCCCeEEEECch
Confidence            1 2345556667899998754

>COG2243 CobF Precorrin-2 methylase [Coenzyme metabolism]

Probab=99.96  E-value=1.2e-28  Score=208.08  Aligned_cols=161  Identities=27%  Similarity=0.378  Sum_probs=124.4

Q ss_pred             CEEEEecCCCCcchhhHHHHHHHHhCCEEEEeCcccccccCCCcchhhHHhhHhC--CC---eee---cC-h----hhHH
Q 027097            1 MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYG--KP---IAL---AD-R----EMVE   67 (228)
Q Consensus         1 ml~iVG~GpG~~~~lT~~A~~~L~~aDvV~~~~~~s~l~~~~~~~~~~~l~~~~~--~~---i~~---~~-~----~~~e   67 (228)
                      |||.||+|||||++||+||+++|++||+|++++....     .+-+..+++++..  ..   +.+   .+ +    +.|+
T Consensus         3 klygVGvGPGDPeLlTlkAi~~L~~adVi~~P~~~g~-----~slAr~Iv~~y~~~~~~~~~l~fPm~~~~~e~~~~~~~   77 (234)
T COG2243           3 KLYGVGLGPGDPELLTLKAIRALKKADVVYVPSKKGK-----GSLAREIVEDYLTPGSRIVELHFPMTTDMREELEDAWE   77 (234)
T ss_pred             eEEEEecCCCChhhhhHHHHHHHhhCCEEEEecCCCc-----cchHHHHHHHhcCCCceeeEEEeccCCchHHHHHHHHH
Confidence            6999999999999999999999999999999944221     1223336766643  11   121   23 2    3477


Q ss_pred             HHHHHHHHHcCC-CcEEEEecCCCCCcccHHHHHHHHHhCCCcEEEECCCCHHhHH-HHhCCccccCCceeEEecccCCC
Q 027097           68 EKADKILSESQE-SNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNAV-GICGLQLYRFGETVSIPFFTETW  145 (228)
Q Consensus        68 ~~~~~i~~~a~~-~~Va~l~~GDP~~~~~~~~l~~~~~~~gi~v~viPGiSs~~a~-a~~Gl~l~~~~~~~~v~~~~~~~  145 (228)
                      +.++.|.+++.+ ++|+|++.|||++|||+.++.++++.+|+++++||||||++|+ |++|+|+...+++.+|.+.+..-
T Consensus        78 e~a~~va~~l~~G~~VAf~~lGDP~~YsTf~~l~~~l~~~~~e~e~VPGVsS~~a~aa~~~~pL~~g~~~l~Vlp~t~~~  157 (234)
T COG2243          78 EAAAEVAAELEAGRDVAFLTLGDPTFYSTFMYLLERLRERGFEVEVVPGVSSFSACAARLGVPLVEGDDSLSVLPATRPD  157 (234)
T ss_pred             HHHHHHHHHHHcCCeEEEEEccCccHHHHHHHHHHHhhccCCceEEeCCcchHHHHHHHhCCceeccCceeEEEeccCch
Confidence            788888888877 7999999999999999999999999999999999999999986 57999999999998988765421


Q ss_pred             CCCChHHHHHHHhhcCCCeEEEEecccC
Q 027097          146 RPGSFYEKIKRNRSLGLHTLCLLDIRVK  173 (228)
Q Consensus       146 ~p~~~~~~i~~~~~~g~~tlvlld~~~~  173 (228)
                            +.+ +..-...+|.|+|.....
T Consensus       158 ------~~~-~~~l~~~d~~VvMK~~~~  178 (234)
T COG2243         158 ------EEL-ERALADFDTAVVMKVGRN  178 (234)
T ss_pred             ------hhH-HhHHhhCCeEEEEecCCc
Confidence                  112 223345578888887753

>COG0007 CysG Uroporphyrinogen-III methylase [Coenzyme metabolism]

Probab=99.96  E-value=1.2e-28  Score=209.04  Aligned_cols=211  Identities=20%  Similarity=0.221  Sum_probs=150.7

Q ss_pred             EEEEecCCCCcchhhHHHHHHHHhCCEEEEeCcccccccCCCcchhhHHhhHh-CCCeeec------ChhhHHHHHHHHH
Q 027097            2 LYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLY-GKPIALA------DREMVEEKADKIL   74 (228)
Q Consensus         2 l~iVG~GpG~~~~lT~~A~~~L~~aDvV~~~~~~s~l~~~~~~~~~~~l~~~~-~~~i~~~------~~~~~e~~~~~i~   74 (228)
                      +|+||.|||||++||+||+++|++||+|+|+.-.       +.+   .++... +.+.+..      .....+++.+.+.
T Consensus         6 V~lVGAGPGdp~LLTlka~~~L~~ADvvlyD~LV-------~~~---il~~~~~~a~~i~vGkr~g~~~~~q~eIn~~lv   75 (244)
T COG0007           6 VYLVGAGPGDPGLLTLRALRALQEADVVLYDRLV-------PEE---VLALARRDAERIYVGKRPGGHSKPQDEINALLV   75 (244)
T ss_pred             EEEEecCCCChhhhhHHHHHHHhhCCEEEEcCcC-------CHH---HHHhhccCCEEEEecCcCCCCCCCHHHHHHHHH
Confidence            7999999999999999999999999999998643       344   343322 2332221      1223677888888


Q ss_pred             HHcCC-CcEEEEecCCCCCcccHHHHHHHHHhCCCcEEEECCCCHHhHH-HHhCCccccCCceeEEecccCCCCCCChHH
Q 027097           75 SESQE-SNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNAV-GICGLQLYRFGETVSIPFFTETWRPGSFYE  152 (228)
Q Consensus        75 ~~a~~-~~Va~l~~GDP~~~~~~~~l~~~~~~~gi~v~viPGiSs~~a~-a~~Gl~l~~~~~~~~v~~~~~~~~p~~~~~  152 (228)
                      +.+++ ++|++|+.|||++|+++.+.++.+.+.||++||+|||||..|+ +.+|+|+++.+.+.++.|.+.|.++..   
T Consensus        76 ~~a~~G~~VVRLKgGDP~iFGRggEE~~~l~~~gI~~eVVPGiTSa~a~~a~agIPlT~R~~a~s~~~vTgh~~~~~---  152 (244)
T COG0007          76 ELAREGKRVVRLKGGDPYIFGRGGEEIEALAEAGIEFEVVPGITSAIAAPAYAGIPLTHRGVASSFTFVTGHDRDGK---  152 (244)
T ss_pred             HHHhcCCeEEEecCCCCCeecCcHHHHHHHHHcCCceEEeCccchHHHHHHHcCCceeecCccceEEEEeCcCCCCC---
Confidence            88887 8999999999999999999999999999999999999999876 579999999999999999999887543   


Q ss_pred             HHHHHhhcCCCeEEEEec-ccCCchhHHhhcc-ccccCCCC---ccC-HHH--HHHHHHHHHHHhCCCCCCCCcEEEEEe
Q 027097          153 KIKRNRSLGLHTLCLLDI-RVKEPSLESLCRG-KKLYEPPR---YMT-VNI--AIEQLLEVELLQGESGKAHELKIILKQ  224 (228)
Q Consensus       153 ~i~~~~~~g~~tlvlld~-~~~~~~~~~l~~~-~~~~~~~~---~~~-~~~--a~~~ll~~~~~~~~~~~~~~~~~v~~~  224 (228)
                      .-++.+.....|+++|+- +.-++....|.+. +..-.|.-   ..| ++|  ....|-++.+...+..+++..++|+|+
T Consensus       153 ~~w~~la~~~~TlVi~Mg~~~l~~i~~~Li~~G~~~~tpvAvi~~gt~~~Qr~~~gtL~~l~~~~~~~~~~~PaiiviG~  232 (244)
T COG0007         153 LDWEALARSVGTLVILMGASRLAEIARELIAHGRSPDTPVAVIENGTTPDQRVVVGTLGDLAELAEEAGLTPPALIVIGE  232 (244)
T ss_pred             cChHHhcccCCCEEEEeCcchHHHHHHHHHHcCCCCCCCEEEEEcCCCcceEEEEeEHHHHHHHHHhcCCCCCEEEEEcc
Confidence            224666667788887554 4333344455553 22222221   111 111  123344454454445577788889886


Q ss_pred             c
Q 027097          225 L  225 (228)
Q Consensus       225 ~  225 (228)
                      .
T Consensus       233 v  233 (244)
T COG0007         233 V  233 (244)
T ss_pred             e
Confidence            4

>PRK05990 precorrin-2 C(20)-methyltransferase; Reviewed

Probab=99.96  E-value=2.2e-27  Score=203.50  Aligned_cols=155  Identities=17%  Similarity=0.223  Sum_probs=110.8

Q ss_pred             CEEEEecCCCCcchhhHHHHHHHHhCCEEEEeCcccccccCCCcchhhHHhhHhC--CCe---ee---cC----------
Q 027097            1 MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYG--KPI---AL---AD----------   62 (228)
Q Consensus         1 ml~iVG~GpG~~~~lT~~A~~~L~~aDvV~~~~~~s~l~~~~~~~~~~~l~~~~~--~~i---~~---~~----------   62 (228)
                      .||+||+|||||++||+||+++|++||+|+++.....     ...+.+.++.+..  +++   .+   .+          
T Consensus         4 ~l~~VG~GPGdp~LlTlkA~~~L~~advi~~~~~~~~-----~~~a~~i~~~~~~~~~~~~~~~~pm~~~~~~~~~~~~~   78 (241)
T PRK05990          4 RLIGLGVGPGDPELLTLKALRLLQAAPVVAYFVAKGK-----KGNAFGIVEAHLSPGQTLLPLVYPVTTEILPPPLCYET   78 (241)
T ss_pred             eEEEEeCCCCChHHhhHHHHHHHhhCCEEEEECCCCC-----cchHHHHHHHHcCCCceEEEeecCCccccccccchhhh
Confidence            4899999999999999999999999999998853211     1122335554432  222   11   11          


Q ss_pred             --hhhHHHHHHHHHHHcCC-CcEEEEecCCCCCcccHHHHHHHHHhCCCcEEEECCCCHHhHH-HHhCCccccCCceeEE
Q 027097           63 --REMVEEKADKILSESQE-SNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNAV-GICGLQLYRFGETVSI  138 (228)
Q Consensus        63 --~~~~e~~~~~i~~~a~~-~~Va~l~~GDP~~~~~~~~l~~~~~~~gi~v~viPGiSs~~a~-a~~Gl~l~~~~~~~~v  138 (228)
                        ++.|++.++.+.+.+++ ++|++|+.|||++|+++.++.+.++ .+++++|||||||++|+ |++|+|+...++.+++
T Consensus        79 ~~~~~~~~~~~~i~~~~~~G~~Vv~L~~GDP~iyst~~~l~~~l~-~~i~~evIPGISS~~aaaA~~gipL~~~~~~~~i  157 (241)
T PRK05990         79 VIADFYDTSAEAVAAHLDAGRDVAVICEGDPFFYGSYMYLHDRLA-PRYETEVIPGVCSMLGCWSVLGAPLVYRNQSLSV  157 (241)
T ss_pred             HHHHHHHHHHHHHHHHHHCCCeEEEEeCCCcHHHhHHHHHHHHHh-cCCCEEEECcHHHHHHHHHHhCCCeEcCCeEEEE
Confidence              22356677788888876 8999999999999999999988874 47999999999999976 5799999987777776


Q ss_pred             ecccCCCCCCChHHHHHHHhhcCCCeEEE
Q 027097          139 PFFTETWRPGSFYEKIKRNRSLGLHTLCL  167 (228)
Q Consensus       139 ~~~~~~~~p~~~~~~i~~~~~~g~~tlvl  167 (228)
                      ....  . +   .+.+...+.....++++
T Consensus       158 ~~~~--~-~---~~~l~~~l~~~~~~vv~  180 (241)
T PRK05990        158 LSGV--L-P---EEELRRRLADADAAVIM  180 (241)
T ss_pred             EcCC--C-C---hHHHHHHHhCCCCEEEE
Confidence            5422  1 1   23445555544334444

>PRK15473 cbiF cobalt-precorrin-4 C(11)-methyltransferase; Provisional

Probab=99.96  E-value=1.4e-27  Score=206.62  Aligned_cols=162  Identities=16%  Similarity=0.130  Sum_probs=116.2

Q ss_pred             CEEEEecCCCCcchhhHHHHHHHHhCCEEEEeCcccccccCCCcchhhHHhhHh-CCCeeecChhhHHHHHHHHHHHcCC
Q 027097            1 MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLY-GKPIALADREMVEEKADKILSESQE   79 (228)
Q Consensus         1 ml~iVG~GpG~~~~lT~~A~~~L~~aDvV~~~~~~s~l~~~~~~~~~~~l~~~~-~~~i~~~~~~~~e~~~~~i~~~a~~   79 (228)
                      |||+||+|||||++||++|+++|++||+|++++..      ...+   .++.+. .++........+++..+.+.+.+++
T Consensus         9 ~l~iVG~GpG~~~~lT~~A~~~L~~advv~~~~~~------~~~~---l~~~~~~~~~~~~~~~~~~~~i~~~i~~~~~~   79 (257)
T PRK15473          9 CVWFVGAGPGDKELITLKGYRLLQQAQVVIYAGSL------INTE---LLDYCPAQAECHDSAELHLEQIIDLMEAGVKA   79 (257)
T ss_pred             EEEEEEeCCCChHHhhHHHHHHHHhCCEEEEeccc------CCHH---HHhhcCCCCEEEecCCCCHHHHHHHHHHHHHC
Confidence            48999999999999999999999999999987531      1122   222221 1222221123466777777776655


Q ss_pred             -CcEEEEecCCCCCcccHHHHHHHHHhCCCcEEEECCCCHHhHH-HHhCCccccCCceeEEecccCCCCCC-ChHHHHHH
Q 027097           80 -SNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNAV-GICGLQLYRFGETVSIPFFTETWRPG-SFYEKIKR  156 (228)
Q Consensus        80 -~~Va~l~~GDP~~~~~~~~l~~~~~~~gi~v~viPGiSs~~a~-a~~Gl~l~~~~~~~~v~~~~~~~~p~-~~~~~i~~  156 (228)
                       ++||+|++|||++|+++.++++.+.+.|++++|+|||||++++ |++|+||...+..-.+.+.+.|+++. +..+.+. 
T Consensus        80 g~~Vv~L~sGDP~~yg~~~~l~~~l~~~~i~veiiPGISS~~aaaA~lg~pl~~~~~~~~~~v~s~hG~~~~~~~~~l~-  158 (257)
T PRK15473         80 GKTVVRLQTGDVSLYGSIREQGEELTKRGIDFQVVPGVSSFLGAAAELGVEYTVPEVSQSLIITRMEGRTPVPAREQLE-  158 (257)
T ss_pred             CCeEEEEeCcCchhhhhHHHHHHHHHHCCCCEEEeCChhHHHHHHHHcCCCcccccccccEEEEeecCCCCCCchhhHH-
Confidence             8999999999999999999999999999999999999999975 67999998554444444456667632 2223333 


Q ss_pred             HhhcCCCeEEEEeccc
Q 027097          157 NRSLGLHTLCLLDIRV  172 (228)
Q Consensus       157 ~~~~g~~tlvlld~~~  172 (228)
                      .+.....|++++....
T Consensus       159 ~~~~~~~t~vi~~~~~  174 (257)
T PRK15473        159 SFASHQTSMAIFLSVQ  174 (257)
T ss_pred             HHhcCCCeEEEECCch
Confidence            4445556888876543

>PRK05787 cobalt-precorrin-6Y C(5)-methyltransferase; Validated

Probab=99.96  E-value=1.8e-27  Score=199.27  Aligned_cols=149  Identities=27%  Similarity=0.372  Sum_probs=104.8

Q ss_pred             CEEEEecCCCCcchhhHHHHHHHHhCCEEEEeCcccccccCCCcchhhHHhhHh-CC-CeeecChhhHHHHHHHHHHHcC
Q 027097            1 MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLY-GK-PIALADREMVEEKADKILSESQ   78 (228)
Q Consensus         1 ml~iVG~GpG~~~~lT~~A~~~L~~aDvV~~~~~~s~l~~~~~~~~~~~l~~~~-~~-~i~~~~~~~~e~~~~~i~~~a~   78 (228)
                      |||+||+|||||++||+||+++|++||+|+++.           ++++.++.+. ++ .+....   .++..+.+....+
T Consensus         1 ~l~vVG~GpG~~~~lT~~a~~~l~~advv~~~~-----------~~~~~~~~~~~~~~~~~~~~---~~~~~~~i~~~~~   66 (210)
T PRK05787          1 MIYIVGIGPGDPEYLTLKALEAIRKADVVVGSK-----------RVLELFPELIDGEAFVLTAG---LRDLLEWLELAAK   66 (210)
T ss_pred             CEEEEEeCCCChHHhhHHHHHHHHhCCEEEEcH-----------hHHHHHHHhccCccEEecCC---HHHHHHHHHHhhC
Confidence            899999999999999999999999999999643           2333555554 22 222222   2333344433334


Q ss_pred             CCcEEEEecCCCCCcccHHHHHHHHHhCCCcEEEECCCCHHhHH-HHhCCccccCCceeEEecccCCCCCCChHHHHHHH
Q 027097           79 ESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNAV-GICGLQLYRFGETVSIPFFTETWRPGSFYEKIKRN  157 (228)
Q Consensus        79 ~~~Va~l~~GDP~~~~~~~~l~~~~~~~gi~v~viPGiSs~~a~-a~~Gl~l~~~~~~~~v~~~~~~~~p~~~~~~i~~~  157 (228)
                      .++|+++++|||++|+.+..+.+. ...+++++++|||||++++ |++|+||+++    .  +.+.|.++... +.+...
T Consensus        67 g~~V~~l~~GDP~~~~~~~~~~~~-~~~~~~veviPGiSs~~aaaa~~g~~l~~~----~--~is~~~~~~~~-~~l~~~  138 (210)
T PRK05787         67 GKNVVVLSTGDPLFSGLGKLLKVR-RAVAEDVEVIPGISSVQYAAARLGIDMNDV----V--FTTSHGRGPNF-EELEDL  138 (210)
T ss_pred             CCcEEEEecCCccccccHHHHHHH-hccCCCeEEEcCHHHHHHHHHHhCCCHHHc----E--EEeecCCCcch-HHHHHH
Confidence            489999999999999977555544 3445899999999999975 6799999863    1  23456665443 456666


Q ss_pred             hhcCCCeEEEEecc
Q 027097          158 RSLGLHTLCLLDIR  171 (228)
Q Consensus       158 ~~~g~~tlvlld~~  171 (228)
                      ++.+.++++++|..
T Consensus       139 ~~~~~~~v~l~~~~  152 (210)
T PRK05787        139 LKNGRKVIMLPDPR  152 (210)
T ss_pred             HHcCCeEEEEcCCC
Confidence            66777777776554

>PRK05948 precorrin-2 methyltransferase; Provisional

Probab=99.96  E-value=2.8e-27  Score=202.40  Aligned_cols=161  Identities=19%  Similarity=0.184  Sum_probs=117.9

Q ss_pred             CEEEEecCCCCcchhhHHHHHHHHhCCEEEEeCcccccccCCCcchhhHHhhHhC--CCeee------cChh----hHHH
Q 027097            1 MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYG--KPIAL------ADRE----MVEE   68 (228)
Q Consensus         1 ml~iVG~GpG~~~~lT~~A~~~L~~aDvV~~~~~~s~l~~~~~~~~~~~l~~~~~--~~i~~------~~~~----~~e~   68 (228)
                      .||+||+|||||++||+||+++|++||+|++|.....-    ..-+.+.++.+..  +++..      .+++    .|++
T Consensus         5 ~ly~VGvGPGdp~LlTlkA~~~L~~advi~~p~~~~~~----~s~a~~i~~~~~~~~~~~~~l~fpm~~~~~~~~~~~~~   80 (238)
T PRK05948          5 TLYGISVGPGDPELITLKGLRLLQSAPVVAFPAGLAGQ----PGLAEQIIAPWLSPQQIKLPLYFPYVQDEEQLEQAWQA   80 (238)
T ss_pred             EEEEEEecCCChHHhHHHHHHHHhhCCEEEEeCCCCCc----hhHHHHHHHHHcCCCcEEEEecCCccCChHHHHHHHHH
Confidence            38999999999999999999999999999998643110    0112235655532  22221      1222    3556


Q ss_pred             HHHHHHHHcCC-CcEEEEecCCCCCcccHHHHHHHHHh--CCCcEEEECCCCHHhHH-HHhCCccccCCceeEEecccCC
Q 027097           69 KADKILSESQE-SNVAFLVVGDPFGATTHTDLVVRAKK--LGIQVKAVHNASVMNAV-GICGLQLYRFGETVSIPFFTET  144 (228)
Q Consensus        69 ~~~~i~~~a~~-~~Va~l~~GDP~~~~~~~~l~~~~~~--~gi~v~viPGiSs~~a~-a~~Gl~l~~~~~~~~v~~~~~~  144 (228)
                      .++.+.+.+.+ ++|++|+.|||++|++..++.+.+++  .|++++|||||||++|+ |++|+||...++.+++++.  |
T Consensus        81 ~~~~i~~~~~~g~~v~~l~~GDp~~ys~~~~l~~~l~~~~~~~~veivPGIss~~a~aa~~g~pL~~~~e~l~ii~~--~  158 (238)
T PRK05948         81 AADQVWHYLEQGEDVAFACEGDVSFYSTFTYLAQTLQELYPQVAIQTIPGVCSPLAAAAALGIPLTLGSQRLAILPA--L  158 (238)
T ss_pred             HHHHHHHHHHcCCeEEEEeCCChHHHHHHHHHHHHHHhcCCCCCEEEECChhHHHHHHHHhCCCeecCCCeEEEEcC--C
Confidence            67777777766 89999999999999999999999877  48999999999999976 5799999988887777653  3


Q ss_pred             CCCCChHHHHHHHhhcCCCeEEEEeccc
Q 027097          145 WRPGSFYEKIKRNRSLGLHTLCLLDIRV  172 (228)
Q Consensus       145 ~~p~~~~~~i~~~~~~g~~tlvlld~~~  172 (228)
                      ..+    +.+.+.+. ..+++|+|....
T Consensus       159 ~~~----~~l~~~l~-~~~~vVlmk~~~  181 (238)
T PRK05948        159 YHL----EELEQALT-WADVVVLMKVSS  181 (238)
T ss_pred             CCH----HHHHHHHh-CCCEEEEEECCc
Confidence            322    23333333 446888888663

>PRK05576 cobalt-precorrin-2 C(20)-methyltransferase; Validated

Probab=99.96  E-value=6e-27  Score=199.27  Aligned_cols=159  Identities=27%  Similarity=0.318  Sum_probs=116.2

Q ss_pred             CEEEEecCCCCcchhhHHHHHHHHhCCEEEEeCcccccccCCCcchhhHHhhHhCC--Ceeec------C----hhhHHH
Q 027097            1 MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYGK--PIALA------D----REMVEE   68 (228)
Q Consensus         1 ml~iVG~GpG~~~~lT~~A~~~L~~aDvV~~~~~~s~l~~~~~~~~~~~l~~~~~~--~i~~~------~----~~~~e~   68 (228)
                      |||+||+|||||++||++|+++|++||+|+++++++.-    .....+.+..+.+.  ++...      +    +..+++
T Consensus         3 ~l~vVG~GpG~~~~lT~~a~~~l~~advV~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (229)
T PRK05576          3 KLYGIGLGPGDPELLTVKAARILEEADVVYAPASRKGG----GSLALNIVRPYLKEETEIVELHFPMSKDEEEKEAVWKE   78 (229)
T ss_pred             EEEEEEeCCCChHHHHHHHHHHHhcCCEEEEECCCCCc----hhHHHHHHHHhcCCCCEEEEeeCCCCCChHHHHHHHHH
Confidence            69999999999999999999999999999998764211    01112245545332  22211      1    233556


Q ss_pred             HHHHHHHHcCC-CcEEEEecCCCCCcccHHHHHHHHHhCCCcEEEECCCCHHhHH-HHhCCccccCCceeEEecccCCCC
Q 027097           69 KADKILSESQE-SNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNAV-GICGLQLYRFGETVSIPFFTETWR  146 (228)
Q Consensus        69 ~~~~i~~~a~~-~~Va~l~~GDP~~~~~~~~l~~~~~~~gi~v~viPGiSs~~a~-a~~Gl~l~~~~~~~~v~~~~~~~~  146 (228)
                      ..+.+.+.+.+ ++|++|++|||++|+++.++++.+++.|++++|+|||||++++ |++|+||...+..+.++..  |. 
T Consensus        79 ~~~~i~~~~~~g~~V~~l~~GDP~~y~~~~~l~~~~~~~~~~v~viPGiSs~~~a~a~~g~~l~~~~~~~~iis~--~~-  155 (229)
T PRK05576         79 NAEEIAAEAEEGKNVAFITLGDPNLYSTFSHLLEYLKCHDIEVETVPGISSFTAIASRAGVPLAMGDESLAIIPA--TR-  155 (229)
T ss_pred             HHHHHHHHHHcCCcEEEEeCcCccccccHHHHHHHHHhCCCCEEEeCChhHHHHHHHHcCCCcccCCceEEEEEC--CC-
Confidence            67777776665 7999999999999999999999998889999999999999975 6799999977665666543  32 


Q ss_pred             CCChHHHHHHHhhcCCCeEEEEecc
Q 027097          147 PGSFYEKIKRNRSLGLHTLCLLDIR  171 (228)
Q Consensus       147 p~~~~~~i~~~~~~g~~tlvlld~~  171 (228)
                          .+.+...+..+ .|++++...
T Consensus       156 ----~~~l~~~l~~~-~~~vl~~~~  175 (229)
T PRK05576        156 ----EALIEQALTDF-DSVVLMKVY  175 (229)
T ss_pred             ----HHHHHHHhhcC-CEEEEEecC
Confidence                23344555444 788888543

>TIGR01467 cobI_cbiL precorrin-2 C20-methyltransferase

Probab=99.95  E-value=1.1e-26  Score=197.63  Aligned_cols=158  Identities=28%  Similarity=0.378  Sum_probs=114.3

Q ss_pred             CEEEEecCCCCcchhhHHHHHHHHhCCEEEEeCcccccccCCCcchhhHHhhHhC---CCee---e---cCh----hhHH
Q 027097            1 MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYG---KPIA---L---ADR----EMVE   67 (228)
Q Consensus         1 ml~iVG~GpG~~~~lT~~A~~~L~~aDvV~~~~~~s~l~~~~~~~~~~~l~~~~~---~~i~---~---~~~----~~~e   67 (228)
                      |||+||+|||||++||++|+++|++||+|+++.++...    ...+++.+..+.+   +++.   +   .++    ..++
T Consensus         2 ~i~iVG~GpG~~~~lT~~a~~~l~~advV~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   77 (230)
T TIGR01467         2 KLYGVGVGPGDPELITVKALEALRSADVIAVPASKKGR----ESLARKIVEDYLKPNDTRILELVFPMTKDRDELEKAWD   77 (230)
T ss_pred             EEEEEEecCCCcHHHHHHHHHHHhhCCEEEEeCCCCCC----cchHHHHHHHhcCccCceEEEEeccccCChHHHHHHHH
Confidence            79999999999999999999999999999998764210    0123334455432   3322   1   111    2245


Q ss_pred             HHHHHHHHHcCC-CcEEEEecCCCCCcccHHHHHHHHHhCCCcEEEECCCCHHhHH-HHhCCccccCCceeEEecccCCC
Q 027097           68 EKADKILSESQE-SNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNAV-GICGLQLYRFGETVSIPFFTETW  145 (228)
Q Consensus        68 ~~~~~i~~~a~~-~~Va~l~~GDP~~~~~~~~l~~~~~~~gi~v~viPGiSs~~a~-a~~Gl~l~~~~~~~~v~~~~~~~  145 (228)
                      +..+.+.+.+++ ++|++|++|||++|+++.++++.+.+.|+++++||||||++++ |++|++|.+.+..+++.  +.|.
T Consensus        78 ~~~~~i~~~~~~g~~Vv~l~~GDP~~y~~~~~l~~~~~~~~~~veviPGiSs~~~a~a~~g~~l~~~~~~~~~~--~~~~  155 (230)
T TIGR01467        78 EAAEAVAAELEEGRDVAFLTLGDPSLYSTFSYLLQRLQGMGIEVEVVPGITSFAACASAAGLPLVEGDESLAIL--PATA  155 (230)
T ss_pred             HHHHHHHHHHHCCCcEEEEeCCCCCcccCHHHHHHHHHHCCCcEEEeCChhHHHHHHHHhCCCcccCCceEEEE--eCCC
Confidence            566677777765 8999999999999999999999998889999999999999975 67999999866555554  3332


Q ss_pred             CCCChHHHHHHHhhcCCCeEEEEe
Q 027097          146 RPGSFYEKIKRNRSLGLHTLCLLD  169 (228)
Q Consensus       146 ~p~~~~~~i~~~~~~g~~tlvlld  169 (228)
                      .    .+.+.+.+..+ .|+++|.
T Consensus       156 ~----~~~~~~~~~~~-~~vvil~  174 (230)
T TIGR01467       156 G----EAELEKALAEF-DTVVLMK  174 (230)
T ss_pred             C----HHHHHHHhccC-CeEEEEe
Confidence            2    23344555555 5667654

This model represents precorrin-2 C20-methyltransferase, one of several closely related S-adenosylmethionine-dependent methyltransferases involved in cobalamin (vitamin B12) biosynthesis.

>PRK15478 cbiH cobalt-precorrin-3B C(17)-methyltransferase; Provisional

Probab=99.95  E-value=7.1e-27  Score=200.37  Aligned_cols=155  Identities=18%  Similarity=0.210  Sum_probs=106.9

Q ss_pred             CEEEEecCCCCcchhhHHHHHHHHhCCEEEEeCcccccccCCCcchhhHHhhHh-CCCeeecChhhHHHHHHHHHHHcCC
Q 027097            1 MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLY-GKPIALADREMVEEKADKILSESQE   79 (228)
Q Consensus         1 ml~iVG~GpG~~~~lT~~A~~~L~~aDvV~~~~~~s~l~~~~~~~~~~~l~~~~-~~~i~~~~~~~~e~~~~~i~~~a~~   79 (228)
                      |||+||+|||||++||+||+++|++||+|+++..  +         .+.+..+. +++++........+..+.+++.+++
T Consensus         1 ml~~VG~GPGdp~lLTlrA~~~L~~ADvVv~~~~--~---------~~lv~~~~~~~~~i~~~~~~~~~~~~~~i~~~~~   69 (241)
T PRK15478          1 MLSVIGIGPGSQAMMTMEAIEALQAAEIVVGYKT--Y---------THLVKAFTGDKQVIKTGMCKEIERCQAAIELAQA   69 (241)
T ss_pred             CEEEEEcCCCChHHHHHHHHHHHHcCCEEEEcCc--H---------HHHHHhhcCCCEEEECCCchHHHHHHHHHHHHHC
Confidence            9999999999999999999999999999996542  1         11344332 3333332222223334556676766


Q ss_pred             -CcEEEEecCCCCCcccHHHHHHHHHhCC--CcEEEECCCCHHhHH-HHhCCccccCCceeEEecccCCCCCCChHHHH-
Q 027097           80 -SNVAFLVVGDPFGATTHTDLVVRAKKLG--IQVKAVHNASVMNAV-GICGLQLYRFGETVSIPFFTETWRPGSFYEKI-  154 (228)
Q Consensus        80 -~~Va~l~~GDP~~~~~~~~l~~~~~~~g--i~v~viPGiSs~~a~-a~~Gl~l~~~~~~~~v~~~~~~~~p~~~~~~i-  154 (228)
                       ++|++|++|||++|++..++.+.+.+.+  ++++|+|||||++++ |++|+|+.+.+...++   +....|   |+.+ 
T Consensus        70 g~~Vv~L~sGDP~~~g~~~~~~~~l~~~~~~~~veviPGiSs~~aaaa~~g~plt~~~~~~s~---~~~~~~---~~~~~  143 (241)
T PRK15478         70 GHNVALISSGDAGIYGMAGLVLELVSKQKLDVEVRLIPGMTASIAAASLLGAPLMHDFCHISL---SDLLTP---WPVIE  143 (241)
T ss_pred             CCeEEEEECCCCCcchhHHHHHHHHHhcCCCCcEEEeCCHHHHHHHHHHhCCCcccCcceeec---ccCCCC---cHHHH
Confidence             8999999999999999999998887654  669999999999975 6799999654333332   111112   3222 


Q ss_pred             --HHHhhcCCCeEEEEeccc
Q 027097          155 --KRNRSLGLHTLCLLDIRV  172 (228)
Q Consensus       155 --~~~~~~g~~tlvlld~~~  172 (228)
                        +..+.....|++|++...
T Consensus       144 ~~~~a~~~~~~tlvlym~~~  163 (241)
T PRK15478        144 KRIVAAGEADFVICFYNPRS  163 (241)
T ss_pred             HhHHHHhcCCeEEEEECCcc
Confidence              223445557888877654

>PRK10637 cysG siroheme synthase; Provisional

Probab=99.95  E-value=7.3e-27  Score=216.94  Aligned_cols=159  Identities=22%  Similarity=0.257  Sum_probs=120.7

Q ss_pred             CEEEEecCCCCcchhhHHHHHHHHhCCEEEEeCcccccccCCCcchhhHHhhHhC---CCeeecC-----hhhHHHHHHH
Q 027097            1 MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYG---KPIALAD-----REMVEEKADK   72 (228)
Q Consensus         1 ml~iVG~GpG~~~~lT~~A~~~L~~aDvV~~~~~~s~l~~~~~~~~~~~l~~~~~---~~i~~~~-----~~~~e~~~~~   72 (228)
                      +||+||+|||||++||++|+++|++||+|+++.+.+       .+    +..+..   ..+....     ...+++..+.
T Consensus       217 ~l~iVG~GpGdp~lLTl~A~~~L~~ADvV~~~~~~~-------~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  285 (457)
T PRK10637        217 EVVLVGAGPGDAGLLTLKGLQQIQQADVVVYDRLVS-------DD----IMNLVRRDADRVFVGKRAGYHCVPQEEINQI  285 (457)
T ss_pred             EEEEEEeCCCChHHHHHHHHHHHHcCCEEEECCCCC-------HH----HHhhcccCCEEEEcCCCCCCCCcCHHHHHHH
Confidence            489999999999999999999999999999875432       11    111111   1111110     1125666677


Q ss_pred             HHHHcCC-CcEEEEecCCCCCcccHHHHHHHHHhCCCcEEEECCCCHHhHH-HHhCCccccCCceeEEecccCCCCCCCh
Q 027097           73 ILSESQE-SNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNAV-GICGLQLYRFGETVSIPFFTETWRPGSF  150 (228)
Q Consensus        73 i~~~a~~-~~Va~l~~GDP~~~~~~~~l~~~~~~~gi~v~viPGiSs~~a~-a~~Gl~l~~~~~~~~v~~~~~~~~p~~~  150 (228)
                      +.+.+.+ ++|++|++|||++|+++.++++++.+.|++++|+|||||++++ |++|+||+.++.+.++.+.+.|+++...
T Consensus       286 i~~~~~~G~~Vv~L~sGDP~~yg~~~~l~~~l~~~gi~vevVPGISS~~aAaA~~g~pl~~~~~~~~~~vis~h~~~~~~  365 (457)
T PRK10637        286 LLREAQKGKRVVRLKGGDPFIFGRGGEELETLCNAGIPFSVVPGITAASGCSAYSGIPLTHRDYAQSVRLVTGHLKTGGE  365 (457)
T ss_pred             HHHHHhCCCEEEEEeCCCccccccHHHHHHHHHhCCCCEEEECCHhHHHHHHHHcCCCcccCCceeeEEEEeCccCCCCc
Confidence            7777666 7899999999999999999999998889999999999999975 6799999998876676667888765443


Q ss_pred             HHHHHHHhhcCCCeEEEEeccc
Q 027097          151 YEKIKRNRSLGLHTLCLLDIRV  172 (228)
Q Consensus       151 ~~~i~~~~~~g~~tlvlld~~~  172 (228)
                      .+  +.++..+.+|++|++...
T Consensus       366 ~~--~~~l~~~~~t~Vl~~~~~  385 (457)
T PRK10637        366 LD--WENLAAEKQTLVFYMGLN  385 (457)
T ss_pred             cC--HHHHhCCCCeEEEECCHh
Confidence            22  355667779999988664

>COG2241 CobL Precorrin-6B methylase 1 [Coenzyme metabolism]

Probab=99.95  E-value=1.3e-26  Score=193.34  Aligned_cols=148  Identities=22%  Similarity=0.255  Sum_probs=105.8

Q ss_pred             CEEEEecCCCCcchhhHHHHHHHHhCCEEEEeCcccccccCCCcchhhHHhhHhCCCeeecChhhHHHHHHHHHHHcCCC
Q 027097            1 MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYGKPIALADREMVEEKADKILSESQES   80 (228)
Q Consensus         1 ml~iVG~GpG~~~~lT~~A~~~L~~aDvV~~~~~~s~l~~~~~~~~~~~l~~~~~~~i~~~~~~~~e~~~~~i~~~a~~~   80 (228)
                      ||++||+||||+++||.+|+++|++||+|+  ++         .++++.+..+..++..........+..+.+..+.+++
T Consensus         1 ~I~vVGiGp~~~~~Lt~~A~~~I~~A~vV~--G~---------kr~L~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~~g~   69 (210)
T COG2241           1 MITVVGIGPGGPEGLTLAAIEAIRRADVVA--GS---------KRHLELLPPLIKAERIIWPYPFDAESLEEILAERKGR   69 (210)
T ss_pred             CEEEEEeCCCChhhhcHHHHHHHHhCCEEe--ec---------HHHHHhhhccccceEEEeccccchHHHHHHHHHhCCC
Confidence            899999999999999999999999999999  65         4545566655543332212222222334555554478


Q ss_pred             cEEEEecCCCCCcccHHHHHHHHHhCCCcEEEECCCCHHhH-HHHhCCccccCCceeEEecccCCCCCCChHHHHHHHhh
Q 027097           81 NVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNA-VGICGLQLYRFGETVSIPFFTETWRPGSFYEKIKRNRS  159 (228)
Q Consensus        81 ~Va~l~~GDP~~~~~~~~l~~~~~~~gi~v~viPGiSs~~a-~a~~Gl~l~~~~~~~~v~~~~~~~~p~~~~~~i~~~~~  159 (228)
                      +||+|.+|||++|+-+..+.+.+..  .+++|||||||+|+ +|++|++|++      +.+.|.|+++   .+.+...+.
T Consensus        70 ~v~VLasGDP~f~G~g~~l~~~~~~--~~v~iIPgiSS~q~a~ARlg~~~~~------~~~islHgr~---~~~l~~~~~  138 (210)
T COG2241          70 DVVVLASGDPLFSGVGRLLRRKFSC--EEVEIIPGISSVQLAAARLGWPLQD------TEVISLHGRP---VELLRPLLE  138 (210)
T ss_pred             CeEEEecCCcchhhhHHHHHHhcCc--cceEEecChhHHHHHHHHhCCChHH------eEEEEecCCC---HHHHHHHHh
Confidence            9999999999999999877776654  58999999999996 5789999996      3444677776   455555554


Q ss_pred             cCCCeEEEEec
Q 027097          160 LGLHTLCLLDI  170 (228)
Q Consensus       160 ~g~~tlvlld~  170 (228)
                      .+...+++.+-
T Consensus       139 ~~~~~vil~~~  149 (210)
T COG2241         139 NGRRLVILTPD  149 (210)
T ss_pred             CCceEEEeCCC
Confidence            44334444443

>TIGR01466 cobJ_cbiH precorrin-3B C17-methyltransferase

Probab=99.95  E-value=8.2e-26  Score=193.16  Aligned_cols=119  Identities=23%  Similarity=0.297  Sum_probs=90.0

Q ss_pred             EEEEecCCCCcchhhHHHHHHHHhCCEEEEeCcccccccCCCcchhhHHhhHh-CCCeeecChhhHHHHHHHHHHHcCC-
Q 027097            2 LYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLY-GKPIALADREMVEEKADKILSESQE-   79 (228)
Q Consensus         2 l~iVG~GpG~~~~lT~~A~~~L~~aDvV~~~~~~s~l~~~~~~~~~~~l~~~~-~~~i~~~~~~~~e~~~~~i~~~a~~-   79 (228)
                      ||+||+|||||++||++|+++|++||+|+++..           +++.++.+. ++++.........+..+.+.+.+.+ 
T Consensus         1 l~iVG~GpG~~~~lT~~A~~~i~~AdvV~~~~~-----------~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g   69 (239)
T TIGR01466         1 LYVVGIGPGAEELMTPEAKEALAEADVIVGYKT-----------YLDLIEDLIPGKEVVTSGMREEIARAELAIELAAEG   69 (239)
T ss_pred             CEEEEeCCCChHHHHHHHHHHHHhCCEEEECcc-----------HHHHHHhhCCCCEEEeCCChHHHHHHHHHHHHHhCC
Confidence            689999999999999999999999999996632           222555543 3333322222222233445555555 


Q ss_pred             CcEEEEecCCCCCcccHHHHHHHHHhCC--CcEEEECCCCHHhHH-HHhCCcccc
Q 027097           80 SNVAFLVVGDPFGATTHTDLVVRAKKLG--IQVKAVHNASVMNAV-GICGLQLYR  131 (228)
Q Consensus        80 ~~Va~l~~GDP~~~~~~~~l~~~~~~~g--i~v~viPGiSs~~a~-a~~Gl~l~~  131 (228)
                      ++|++|++|||++|+++.++++.+++.+  ++++++|||||++++ |++|+||.+
T Consensus        70 ~~Vv~l~~GDP~~~~~~~~l~~~l~~~~~~~~v~viPGiSS~~aa~a~~g~p~~~  124 (239)
T TIGR01466        70 RTVALVSSGDPGIYGMAALVFEALEKKGAEVDIEVIPGITAASAAASLLGAPLGH  124 (239)
T ss_pred             CCEEEEecCCCcccccHHHHHHHHHhcCCCCCEEEeCCccHHHHHHHHcCCCccc
Confidence            8999999999999999999988887764  699999999999975 679999954

This model represents precorrin-3B C17-methyltransferase, one of two methyltransferases commonly referred to as precorrin-3 methylase (the other is precorrin-4 C11-methyltransferase, EC 2.1.1.133). This enzyme participates in the pathway toward the biosynthesis of cobalamin and related products. Members of this family may appear as fusion proteins with other enzymes of cobalamin biosynthesis.

>PRK14994 SAM-dependent 16S ribosomal RNA C1402 ribose 2'-O-methyltransferase; Provisional

Probab=99.94  E-value=3.9e-26  Score=199.92  Aligned_cols=189  Identities=22%  Similarity=0.261  Sum_probs=134.6

Q ss_pred             CEEEEecCCCCcchhhHHHHHHHHhCCEEEEeCcccccccCCCcchhhHHhhH-hCCCeeecChhhHHHHHHHHHHHcCC
Q 027097            1 MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKL-YGKPIALADREMVEEKADKILSESQE   79 (228)
Q Consensus         1 ml~iVG~GpG~~~~lT~~A~~~L~~aDvV~~~~~~s~l~~~~~~~~~~~l~~~-~~~~i~~~~~~~~e~~~~~i~~~a~~   79 (228)
                      |||+||+||||+++||+||+++|++||+|+|+++..      ...   .++.+ .++++.......+++..+.|++.+++
T Consensus        13 ~Ly~VgtgiGn~edITlRAl~~L~~aDvI~~edtr~------t~~---ll~~~~i~~~~~~~~~~~~~~~~~~i~~~l~~   83 (287)
T PRK14994         13 QLYIVPTPIGNLADITQRALEVLQAVDLIAAEDTRH------TGL---LLQHFAINARLFALHDHNEQQKAETLLAKLQE   83 (287)
T ss_pred             eEEEEeCCCCChHHhhHHHHHHHHhCCEEEEeCCcc------hHH---HHhhcCCCCEEEEccCCCHHHHHHHHHHHHHC
Confidence            599999999999999999999999999999998632      112   23322 23454443444577777888888877


Q ss_pred             -CcEEEEe-cCCCCCcccHHHHHHHHHhCCCcEEEECCCCHHhHH-HHhCCccccCCceeEEecccCCCCCCChHHHHHH
Q 027097           80 -SNVAFLV-VGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNAV-GICGLQLYRFGETVSIPFFTETWRPGSFYEKIKR  156 (228)
Q Consensus        80 -~~Va~l~-~GDP~~~~~~~~l~~~~~~~gi~v~viPGiSs~~a~-a~~Gl~l~~~~~~~~v~~~~~~~~p~~~~~~i~~  156 (228)
                       ++||+++ .|||++|+++.++++.+++.|++|++|||+||++++ +++|+|..+|   .+..|.+.+..   ....-.+
T Consensus        84 G~~ValvSdaGdP~I~dpg~~Lv~~~~~~gi~v~vIPGiSA~~aA~a~sG~~~~~f---~f~Gflp~~~~---~r~~~L~  157 (287)
T PRK14994         84 GQNIALVSDAGTPLINDPGYHLVRTCREAGIRVVPLPGPCAAITALSAAGLPSDRF---CYEGFLPAKSK---GRRDALK  157 (287)
T ss_pred             CCeEEEEccCCCCceeCCHHHHHHHHHHCCCCEEEeCCHHHHHHHHHHcCCCCCcc---eEeEECCCCCc---hHHHHHH
Confidence             8999998 999999999999999999999999999999999865 6799996543   12223322211   1122233


Q ss_pred             HhhcCCCeEEEEec-ccCCchhHHh------------hcc-ccccCCCCccCHHHHHHHHHH
Q 027097          157 NRSLGLHTLCLLDI-RVKEPSLESL------------CRG-KKLYEPPRYMTVNIAIEQLLE  204 (228)
Q Consensus       157 ~~~~g~~tlvlld~-~~~~~~~~~l------------~~~-~~~~~~~~~~~~~~a~~~ll~  204 (228)
                      .+.....|+|||.. ....+.++.+            +|+ +|.||.-...++.+.++.+.+
T Consensus       158 ~l~~~~~t~V~yesp~R~~~~l~~l~~~~g~~~~v~i~relTk~~E~~~~g~~~~i~~~~~~  219 (287)
T PRK14994        158 ALEAEPRTLIFYESTHRLLDSLEDIVAVLGESRYVVLARELTKTWETIHGAPVGELLAWVKE  219 (287)
T ss_pred             HHhcCCCeEEEEEEChhHHHHHHHHHHhcCCCCeEEEEeeccCCCCcEEeeEHHHHHHHHHh
Confidence            44455689999886 4332233322            343 667777677888888887744

>PRK05765 precorrin-3B C17-methyltransferase; Provisional

Probab=99.94  E-value=1.1e-25  Score=193.60  Aligned_cols=154  Identities=18%  Similarity=0.157  Sum_probs=104.9

Q ss_pred             CEEEEecCCCCcchhhHHHHHHHHhCCEEEEeCcccccccCCCcchhhHHhhHh-CCCeeecChhhHHHHHHHHHHHcCC
Q 027097            1 MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLY-GKPIALADREMVEEKADKILSESQE   79 (228)
Q Consensus         1 ml~iVG~GpG~~~~lT~~A~~~L~~aDvV~~~~~~s~l~~~~~~~~~~~l~~~~-~~~i~~~~~~~~e~~~~~i~~~a~~   79 (228)
                      |||+||+|||||++||+||+++|++||+|+++...           .+.+..+. ++++...+........+.+++.+++
T Consensus         3 ~v~iVG~GpGdp~~lT~ra~~~L~~AdvV~~~~~~-----------~~~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~   71 (246)
T PRK05765          3 KLYIVGIGPGSKEQRTIKAQEAIEKSNVIIGYNTY-----------LRLISDLLDGKEVIGARMKEEIFRANTAIEKALE   71 (246)
T ss_pred             EEEEEEcCCCChHHhhHHHHHHHHhCCEEEEccCH-----------HHHHHHhcCCCEEecCCchHHHHHHHHHHHHHHC
Confidence            58999999999999999999999999999976421           11343333 3444332211111123456666665


Q ss_pred             -CcEEEEecCCCCCcccHHHHHHHHHhCCC--cEEEECCCCHHhHH-HHhCCccccCCceeEEecccCC--CCCCChHHH
Q 027097           80 -SNVAFLVVGDPFGATTHTDLVVRAKKLGI--QVKAVHNASVMNAV-GICGLQLYRFGETVSIPFFTET--WRPGSFYEK  153 (228)
Q Consensus        80 -~~Va~l~~GDP~~~~~~~~l~~~~~~~gi--~v~viPGiSs~~a~-a~~Gl~l~~~~~~~~v~~~~~~--~~p~~~~~~  153 (228)
                       ++|++|++|||++|+++.++++.+.++|+  +++|+|||||++++ |++|+||.....     +.+.|  ..|......
T Consensus        72 g~~Vv~l~~GDP~i~~~~~~~~~~l~~~~~~~~veviPGiSs~~aa~a~~g~pl~~~~~-----~~s~~~~~~p~~~~~~  146 (246)
T PRK05765         72 GNIVALVSSGDPQVYGMAGLVFELISRRKLDVDVEVIPGVTAALAAAARLGSPLSLDFV-----VISLSDLLIPREEILH  146 (246)
T ss_pred             CCcEEEEeCCCchhhhhHHHHHHHHHhcCCCCCEEEeCCHHHHHHHHHHhCCCCcCCcE-----EEEcCCCCCChHHHHH
Confidence             89999999999999999999999988876  79999999999975 679999963221     22333  223211110


Q ss_pred             HHHHhhcCCCeEEEEec
Q 027097          154 IKRNRSLGLHTLCLLDI  170 (228)
Q Consensus       154 i~~~~~~g~~tlvlld~  170 (228)
                      -+..+.....|++|++.
T Consensus       147 ~l~~~~~~~~~ivly~~  163 (246)
T PRK05765        147 RVTKAAEADFVIVFYNP  163 (246)
T ss_pred             HHHHHhcCCeEEEEEcc
Confidence            12233455678888875

>PRK08284 precorrin 6A synthase; Provisional

Probab=99.94  E-value=2.8e-26  Score=197.71  Aligned_cols=139  Identities=22%  Similarity=0.293  Sum_probs=101.1

Q ss_pred             CEEEEecCCCCcchhhHHHHHHHHhCCEEEEeCcccccccCCCcchhhHHhhHhC---CCeeec-----Ch---------
Q 027097            1 MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYG---KPIALA-----DR---------   63 (228)
Q Consensus         1 ml~iVG~GpG~~~~lT~~A~~~L~~aDvV~~~~~~s~l~~~~~~~~~~~l~~~~~---~~i~~~-----~~---------   63 (228)
                      +||+||+||||||+||+||+++|++||+|++++....- .+...-..+.++.+..   .++...     +.         
T Consensus         3 kly~VGvGPGDPeLLTlkA~r~L~~advV~~p~~~~~~-~~la~~a~~iv~~~~~~~~~~~~~l~~p~~~~~~~~~~~~~   81 (253)
T PRK08284          3 RLLLIGIGAGDPDHLTLQAIKALNRADVFFVPDKGADK-DDLVALRREICARHITGPGYRVVEFDDPVRDRAPDDYRAAV   81 (253)
T ss_pred             EEEEEEecCCChhHhhHHHHHHHHhCCEEEEECCCCCc-hhHHHHHHHHHHHHhcCCCceEEecCCCCcccchhhhhhhh
Confidence            38999999999999999999999999999998652110 0011111224444432   222211     11         


Q ss_pred             hhHHHH-----HHHHHHHcCC-CcEEEEecCCCCCcccHHHHHHHHHh---CCCcEEEECCCCHHhHH-HHhCCccccCC
Q 027097           64 EMVEEK-----ADKILSESQE-SNVAFLVVGDPFGATTHTDLVVRAKK---LGIQVKAVHNASVMNAV-GICGLQLYRFG  133 (228)
Q Consensus        64 ~~~e~~-----~~~i~~~a~~-~~Va~l~~GDP~~~~~~~~l~~~~~~---~gi~v~viPGiSs~~a~-a~~Gl~l~~~~  133 (228)
                      ..|++.     .+.|.+.+.+ ++|++|++|||++|+++.++++.+.+   .|++++|||||||++|+ |++|+||.+.+
T Consensus        82 ~~~~~~~~~~~~~~i~~~l~~g~~Vv~l~~GDP~~ys~~~~l~~~l~~~~~~~i~vevVPGISS~~aaaA~lg~pl~~~~  161 (253)
T PRK08284         82 DDWHAARAALYERLIAEELPDGGTGAFLVWGDPSLYDSTLRILERVRARGRVAFDYEVIPGITSVQALAARHRIPLNRIG  161 (253)
T ss_pred             hhHHHHHHHHHHHHHHHHHhCCCcEEEEeCCCcchhhHHHHHHHHHHhhccCCCcEEEECChhHHHHHHHHcCCChhcCC
Confidence            112222     4557777766 89999999999999999999999876   48999999999999976 67999999888


Q ss_pred             ceeEEec
Q 027097          134 ETVSIPF  140 (228)
Q Consensus       134 ~~~~v~~  140 (228)
                      +++.++.
T Consensus       162 ~~l~ii~  168 (253)
T PRK08284        162 EPVHITT  168 (253)
T ss_pred             ceEEEEe
Confidence            7777764

>PRK07168 bifunctional uroporphyrinogen-III methyltransferase/uroporphyrinogen-III synthase; Reviewed

Probab=99.94  E-value=1.4e-25  Score=208.52  Aligned_cols=159  Identities=18%  Similarity=0.118  Sum_probs=114.5

Q ss_pred             CEEEEecCCCCcchhhHHHHHHHHhCCEEEEeCcccccccCCCcchhhHHhhHhC--CCeeec-----Ch-hhHHHHHHH
Q 027097            1 MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYG--KPIALA-----DR-EMVEEKADK   72 (228)
Q Consensus         1 ml~iVG~GpG~~~~lT~~A~~~L~~aDvV~~~~~~s~l~~~~~~~~~~~l~~~~~--~~i~~~-----~~-~~~e~~~~~   72 (228)
                      ++|+||+|||||++||+||+++|++||+|+|+.-.       +..    +..+..  .+++..     +. ...+++.+.
T Consensus         4 ~V~lVGaGPGdp~LLTlrA~~~L~~ADVVvydrlv-------~~~----~l~~~~~~~~~i~~gk~~~~~~~~qe~i~~~   72 (474)
T PRK07168          4 YVYLVGAGPGDEGLITKKAIECLKRADIVLYDRLL-------NPF----FLSYTKQTCELMYCGKMPKNHIMRQEMINAH   72 (474)
T ss_pred             EEEEEEECCCChHHHHHHHHHHHHhCCEEEEeCcC-------CHH----HHhhcCCCcEEEeccCcCCCccccHHHHHHH
Confidence            38999999999999999999999999999986421       121    111211  122110     00 112334455


Q ss_pred             HHHHcCC-CcEEEEecCCCCCcccHHHHHHHHHhCCCcEEEECCCCHHhHH-HHhCCccccCCceeEEecccCCCCCCCh
Q 027097           73 ILSESQE-SNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNAV-GICGLQLYRFGETVSIPFFTETWRPGSF  150 (228)
Q Consensus        73 i~~~a~~-~~Va~l~~GDP~~~~~~~~l~~~~~~~gi~v~viPGiSs~~a~-a~~Gl~l~~~~~~~~v~~~~~~~~p~~~  150 (228)
                      +.+.+++ ++|++|++|||++|+++.++++.+.+.|++++|||||||++|+ |++|+||++.+.+.++.+.+.|.++...
T Consensus        73 l~~~a~~Gk~VvrL~~GDP~vfg~~~ee~~~l~~~gi~~eVVPGISS~~aaaA~aGiPlt~r~~~~s~~viT~h~~~~~~  152 (474)
T PRK07168         73 LLQFAKEGKIVVRLKGGDPSIFGRVGEEAETLAAANIPYEIVPGITSSIAASSYAGIPLTHRNYSNSVTLLTGHAKGPLT  152 (474)
T ss_pred             HHHHHhCCCEEEEEeCCCchHHhhHHHHHHHHHhCCCCEEEECChhHHHHHHHHcCCCCCCccccceEEEEccCcCCccc
Confidence            6677666 8999999999999999999999999999999999999999976 6799999998888888888888764211


Q ss_pred             HHHHHHHhhcCCCeEEEEecc
Q 027097          151 YEKIKRNRSLGLHTLCLLDIR  171 (228)
Q Consensus       151 ~~~i~~~~~~g~~tlvlld~~  171 (228)
                      -..-+..+.. ..|+++|...
T Consensus       153 ~~~~~~~l~~-~~tlV~lm~~  172 (474)
T PRK07168        153 DHGKYNSSHN-SDTIAYYMGI  172 (474)
T ss_pred             cchhHHHhcC-CCeEEEEcCh
Confidence            1112333443 3588875543

>PRK05991 precorrin-3B C17-methyltransferase; Provisional

Probab=99.94  E-value=3.1e-25  Score=191.14  Aligned_cols=120  Identities=21%  Similarity=0.260  Sum_probs=86.2

Q ss_pred             CEEEEecCCCCcchhhHHHHHHHHhCCEEEEeCcccccccCCCcchhhHHhhHhCC-CeeecChhhHHHHHHHHHHHcCC
Q 027097            1 MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYGK-PIALADREMVEEKADKILSESQE   79 (228)
Q Consensus         1 ml~iVG~GpG~~~~lT~~A~~~L~~aDvV~~~~~~s~l~~~~~~~~~~~l~~~~~~-~i~~~~~~~~e~~~~~i~~~a~~   79 (228)
                      |||+||+|||||++||++|+++|++||+|++..  .++         +.+....+. .+...+++..++..+.+....+.
T Consensus         4 ~l~iVG~GpG~p~~lT~~a~~~l~~AdvV~~~~--~~l---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g   72 (250)
T PRK05991          4 RLFVIGTGPGNPEQMTPEALAAVEAATDFFGYG--PYL---------DRLPLRADQLRHASDNREELDRAGAALAMAAAG   72 (250)
T ss_pred             eEEEEEeCCCChhhhhHHHHHHHHhCCEEEEcH--HHH---------HhhhccccccccCCCCHHHHHHHHHHHHHHHCC
Confidence            599999999999999999999999999999642  111         122111111 11122333333333333233345


Q ss_pred             CcEEEEecCCCCCcccHHHHHHHHHh-----CCCcEEEECCCCHHhHH-HHhCCcccc
Q 027097           80 SNVAFLVVGDPFGATTHTDLVVRAKK-----LGIQVKAVHNASVMNAV-GICGLQLYR  131 (228)
Q Consensus        80 ~~Va~l~~GDP~~~~~~~~l~~~~~~-----~gi~v~viPGiSs~~a~-a~~Gl~l~~  131 (228)
                      ++|++|++|||++|+++.++.+.+++     .|++++|+|||||++++ |++|+||.+
T Consensus        73 ~~Vv~l~~GDP~~~~~~~~l~~~~~~g~~~~~~~~v~vvPGISS~~aa~a~~g~p~~~  130 (250)
T PRK05991         73 ANVCVVSGGDPGVFAMAAAVCEAIENGPAAWRAVDLTIVPGVTAMLAVAARIGAPLGH  130 (250)
T ss_pred             CeEEEEeCCCchhhhhHHHHHHHHHhcccccCCceEEEECChHHHHHHHHHhCCCCCC
Confidence            89999999999999999888888764     46899999999999975 679999964

>TIGR02434 CobF precorrin-6A synthase (deacetylating)

Probab=99.93  E-value=1.3e-25  Score=193.08  Aligned_cols=139  Identities=22%  Similarity=0.288  Sum_probs=100.2

Q ss_pred             CEEEEecCCCCcchhhHHHHHHHHhCCEEEEeCcccccccCCCcchhhHHhhHh---CCCeeec------Ch--------
Q 027097            1 MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLY---GKPIALA------DR--------   63 (228)
Q Consensus         1 ml~iVG~GpG~~~~lT~~A~~~L~~aDvV~~~~~~s~l~~~~~~~~~~~l~~~~---~~~i~~~------~~--------   63 (228)
                      .||+||+||||||+||+||+++|++||+|+++.....- .+...-+.+.++.+.   ++++...      +.        
T Consensus         2 ~l~~VG~GPGDPeLLTlkA~r~L~~AdvV~~p~~~~~~-~~l~~~a~~i~~~~~~~~~~~i~~~~~pm~~~~~~~y~~~~   80 (249)
T TIGR02434         2 TILLIGIGAGDPEQLTLQAVDALNHADVFFVLDKGEQK-SDLVALRREICARYVTAPGYRIVEVDDPERDAGADDYRAAV   80 (249)
T ss_pred             EEEEEEeCCCChHHhHHHHHHHHHhCCEEEEECCCCCc-hhHHHHHHHHHHHHhCCCCcEEEEecCCCcCCccchhhhhH
Confidence            48999999999999999999999999999998542100 000000122444332   1222221      10        


Q ss_pred             hhHH-----HHHHHHHHHcCC-CcEEEEecCCCCCcccHHHHHHHHHh---CCCcEEEECCCCHHhHH-HHhCCccccCC
Q 027097           64 EMVE-----EKADKILSESQE-SNVAFLVVGDPFGATTHTDLVVRAKK---LGIQVKAVHNASVMNAV-GICGLQLYRFG  133 (228)
Q Consensus        64 ~~~e-----~~~~~i~~~a~~-~~Va~l~~GDP~~~~~~~~l~~~~~~---~gi~v~viPGiSs~~a~-a~~Gl~l~~~~  133 (228)
                      ..|.     +.++.|.+.+++ ++||+|++|||++|+++.++.+.+.+   .+++++|||||||++++ |++|+||++.+
T Consensus        81 ~~~~~~~~~~~a~~i~~~~~~g~~Vv~L~~GDP~~yst~~~l~~~l~~~~~~~~~vevVPGISS~~aaaA~lg~pl~~~~  160 (249)
T TIGR02434        81 DDWHAQRADIWAQAIAEELGDDGTGAFLVWGDPSLYDSTLRILERLRALGGVPFDYEVIPGITSVQALTARHRIPLNRIG  160 (249)
T ss_pred             HHhhhhHHHHHHHHHHHHHhCCCcEEEEeCCCchHhhhHHHHHHHHHHhcCCCCCEEEECCHHHHHHHHHHhCCCcccCC
Confidence            1112     355667777766 89999999999999999999998876   47899999999999975 67999999887


Q ss_pred             ceeEEec
Q 027097          134 ETVSIPF  140 (228)
Q Consensus       134 ~~~~v~~  140 (228)
                      +.+.+++
T Consensus       161 ~~l~v~~  167 (249)
T TIGR02434       161 EPVQITT  167 (249)
T ss_pred             ceEEEEe
Confidence            7776654

This model identifies CobF in High GC gram positive, alphaproteobacteria and pseudomonas-related species.

>TIGR02467 CbiE precorrin-6y C5,15-methyltransferase (decarboxylating), CbiE subunit

Probab=99.93  E-value=1.3e-24  Score=181.86  Aligned_cols=146  Identities=21%  Similarity=0.180  Sum_probs=102.8

Q ss_pred             EEecCCCCcchhhHHHHHHHHhCCEEEEeCcccccccCCCcchhhHHhhHhCC-CeeecChhhHHHHHHHHHHHcCCCcE
Q 027097            4 IIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYGK-PIALADREMVEEKADKILSESQESNV   82 (228)
Q Consensus         4 iVG~GpG~~~~lT~~A~~~L~~aDvV~~~~~~s~l~~~~~~~~~~~l~~~~~~-~i~~~~~~~~e~~~~~i~~~a~~~~V   82 (228)
                      |||+|||||++||+||+++|++||+|+++..           .++.+..+.++ .........+++..+.+.+.+..++|
T Consensus         1 iVG~GpG~~~~lT~~a~~~L~~advv~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~~v   69 (204)
T TIGR02467         1 VVGIGPGGPELLTPAAIEAIRKADLVVGGER-----------HLELLAELIGEKREIILTYKDLDELLEFIAATRKEKRV   69 (204)
T ss_pred             CEEeCCCChhhcCHHHHHHHHhCCEEEechh-----------hHHHHhhhcCCceEeccCcCCHHHHHHHHHHhcCCCCE
Confidence            6999999999999999999999999997532           22244444333 22221223467777777766556899


Q ss_pred             EEEecCCCCCcccHHHHHHHHHhCCCcEEEECCCCHHhHH-HHhCCccccCCceeEEecccCCCCCCChHHHHHHHhhcC
Q 027097           83 AFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNAV-GICGLQLYRFGETVSIPFFTETWRPGSFYEKIKRNRSLG  161 (228)
Q Consensus        83 a~l~~GDP~~~~~~~~l~~~~~~~gi~v~viPGiSs~~a~-a~~Gl~l~~~~~~~~v~~~~~~~~p~~~~~~i~~~~~~g  161 (228)
                      +++++|||++|+++.++.+.+.+  .+++++|||||++++ |++|+||.++      .+.+.|.++....  ....+..+
T Consensus        70 v~l~~GDP~~~~~~~~l~~~~~~--~~v~iiPGiSs~~~a~a~~g~~l~~~------~~is~~~~~~~~~--~~~~l~~~  139 (204)
T TIGR02467        70 VVLASGDPLFYGIGRTLAERLGK--ERLEIIPGISSVQYAFARLGLPWQDA------VVISLHGRELDEL--LLALLRGH  139 (204)
T ss_pred             EEEecCCCcccccHHHHHHhCCC--CcEEEeCChHHHHHHHHHcCCChhhC------eEEEeeCCCCcHH--HHHHHhcC
Confidence            99999999999999888877754  479999999999975 6799999743      2234455542211  33455555


Q ss_pred             CCeEEEEec
Q 027097          162 LHTLCLLDI  170 (228)
Q Consensus       162 ~~tlvlld~  170 (228)
                      ..+++|++.
T Consensus       140 ~~~vvl~~~  148 (204)
T TIGR02467       140 RKVAVLTDP  148 (204)
T ss_pred             CcEEEEeCC
Confidence            556666554

This model recognizes the CbiE methylase which is responsible, in part (along with CbiT), for methylating precorrin-6y (or cobalt-precorrin-6y) at both the 5 and 15 positions as well as the concomitant decarbozylation at C-12. In many organisms, this protein is fused to the CbiT subunit. The fused protein, when found in organisms catalyzing the oxidative version of the cobalamin biosynthesis pathway, is called CobL.

>COG0313 Predicted methyltransferases [General function prediction only]

Probab=99.86  E-value=3.5e-20  Score=159.11  Aligned_cols=187  Identities=26%  Similarity=0.295  Sum_probs=140.1

Q ss_pred             CEEEEecCCCCcchhhHHHHHHHHhCCEEEEeCcccccccCCCcchhhHHhhH-hCCCeeecChhhHHHHHHHHHHHcCC
Q 027097            1 MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKL-YGKPIALADREMVEEKADKILSESQE   79 (228)
Q Consensus         1 ml~iVG~GpG~~~~lT~~A~~~L~~aDvV~~~~~~s~l~~~~~~~~~~~l~~~-~~~~i~~~~~~~~e~~~~~i~~~a~~   79 (228)
                      +||+|++..||.++||.||+++|++||+|+|++....      ..   .+..+ +..++...+..+.++....+++.+++
T Consensus         6 ~LYlV~TPIGNl~Dit~Ral~~L~~~D~iaaEDTR~t------~~---LL~~~~I~~~~is~h~hne~~~~~~li~~l~~   76 (275)
T COG0313           6 TLYLVPTPIGNLADITLRALEVLKEVDVIAAEDTRVT------RK---LLSHLGIKTPLISYHEHNEKEKLPKLIPLLKK   76 (275)
T ss_pred             eEEEeCCCCCChHhcCHHHHHHHhhCCEEEEeccHHH------HH---HHHHhCCCCceecccCCcHHHHHHHHHHHHhc
Confidence            4999999999999999999999999999999986311      11   44444 23444333334445566778888877


Q ss_pred             -CcEEEEe-cCCCCCcccHHHHHHHHHhCCCcEEEECCCCHHh-HHHHhCCccccCCceeEEecccCCCCCCCh--HHHH
Q 027097           80 -SNVAFLV-VGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMN-AVGICGLQLYRFGETVSIPFFTETWRPGSF--YEKI  154 (228)
Q Consensus        80 -~~Va~l~-~GDP~~~~~~~~l~~~~~~~gi~v~viPGiSs~~-a~a~~Gl~l~~~~~~~~v~~~~~~~~p~~~--~~~i  154 (228)
                       ++|++++ .|.|++++++..|++++++.||+|+++||+||+. |++++|+|..+|-   ...|.     |...  ....
T Consensus        77 g~~valVSDAG~P~ISDPG~~LV~~a~~~gi~V~~lPG~sA~~tAL~~SGl~~~~F~---F~GFL-----P~k~~~R~~~  148 (275)
T COG0313          77 GKSVALVSDAGTPLISDPGYELVRAAREAGIRVVPLPGPSALITALSASGLPSQRFL---FEGFL-----PRKSKERRKR  148 (275)
T ss_pred             CCeEEEEecCCCCcccCccHHHHHHHHHcCCcEEecCCccHHHHHHHHcCCCCCCee---EeccC-----CCCccHHHHH
Confidence             6999999 9999999999999999999999999999999976 6789999998651   22333     3322  2233


Q ss_pred             HHHhhcCCCeEEEEecccCC-------------chhHHhhcc-ccccCCCCccCHHHHHHHHHH
Q 027097          155 KRNRSLGLHTLCLLDIRVKE-------------PSLESLCRG-KKLYEPPRYMTVNIAIEQLLE  204 (228)
Q Consensus       155 ~~~~~~g~~tlvlld~~~~~-------------~~~~~l~~~-~~~~~~~~~~~~~~a~~~ll~  204 (228)
                      .+.+.....|++|++.-..-             .+...++|+ +|.||.-+..++.|.++.+-+
T Consensus       149 l~~l~~~~~t~IfyEsphRl~~tL~d~~~~~g~~r~v~vaRELTK~~Ee~~~g~~~e~~~~~~~  212 (275)
T COG0313         149 LEALANEPRTLIFYESPHRLLATLEDIVEVLGSDREVVVARELTKLFEEIYRGTLSELIEWLEE  212 (275)
T ss_pred             HHHHHhcCCeEEEEecchhHHHHHHHHHHHcCCCceEEEEeecccchhheecccHHHHHHHhhh
Confidence            45556666789998876531             122335677 899998888899999988877

>TIGR00096 probable S-adenosylmethionine-dependent methyltransferase, YraL family

Probab=99.82  E-value=1.5e-19  Score=157.40  Aligned_cols=189  Identities=20%  Similarity=0.159  Sum_probs=137.4

Q ss_pred             CEEEEecCCCCcchhhHHHHHHHHhCCEEEEeCcccccccCCCcchhhHHhhH-hCCCeeecChhhHHHHHHHHHHHcCC
Q 027097            1 MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKL-YGKPIALADREMVEEKADKILSESQE   79 (228)
Q Consensus         1 ml~iVG~GpG~~~~lT~~A~~~L~~aDvV~~~~~~s~l~~~~~~~~~~~l~~~-~~~~i~~~~~~~~e~~~~~i~~~a~~   79 (228)
                      |||+|++..||.++||+||+++|++||+|+|+++...      ..   .+..+ +.++....+.....+....+++..++
T Consensus         1 mLyvv~TPIGNl~Dit~Ral~~L~~~d~i~~EDTR~t------~k---LL~~~~I~~~~~~~~~hn~~~~~~~l~~~l~~   71 (276)
T TIGR00096         1 LLYVVTTPIGNLEDITRRALELLACVDLFAEEDTRTS------KL---LLHLGIIATPKAFHIDNEFQEKQNLLAAKLEI   71 (276)
T ss_pred             CEEEECCCCcCHHHHhHHHHHHHHhCCEEEecCchhH------HH---HHHhcCCCCceEEEecccHhHHHHHHHHHHHc
Confidence            8999999999999999999999999999999986321      11   33322 23444433333444455666676666


Q ss_pred             -CcEEEEe-cCCCCCcccHHHHHHHHHhCCCcEEEECCCCHHhH-HHHhCCccccCCceeEEecccCCCCCCChHHHHHH
Q 027097           80 -SNVAFLV-VGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNA-VGICGLQLYRFGETVSIPFFTETWRPGSFYEKIKR  156 (228)
Q Consensus        80 -~~Va~l~-~GDP~~~~~~~~l~~~~~~~gi~v~viPGiSs~~a-~a~~Gl~l~~~~~~~~v~~~~~~~~p~~~~~~i~~  156 (228)
                       ++|++++ .|.|++.+++..+++.+.+.|++|.++||.|++.+ ++++|++...|   ....|+...   ..-...+.+
T Consensus        72 g~~valvSDAG~P~ISDPG~~LV~~~~~~~i~v~~ipG~sA~~~Al~~SG~~~~~f---~F~GFlp~k---~~~r~~~l~  145 (276)
T TIGR00096        72 GNNIAVSSDAGPPLISDPGHLLVACREKANIIVVPLPGAAALTAALCASGPATDRF---FFGGFLPKK---SKRRQALKA  145 (276)
T ss_pred             CCcEEEEecCCCCCcCCccHHHHHHHHHCCCeEEcCChHHHHHHHHHhcCCCCCce---EEeeeCCCC---hHHHHHHHH
Confidence             8899999 99999999999999999999999999999999985 57899987654   122222211   112345566


Q ss_pred             HhhcCCCeEEEEecccCCc------------hhHHhhcc-ccccCCCCccCHHHHHHHHHH
Q 027097          157 NRSLGLHTLCLLDIRVKEP------------SLESLCRG-KKLYEPPRYMTVNIAIEQLLE  204 (228)
Q Consensus       157 ~~~~g~~tlvlld~~~~~~------------~~~~l~~~-~~~~~~~~~~~~~~a~~~ll~  204 (228)
                      .+....+|++|++.-..-.            +.-.++|+ +|.||.-.+.++.++++.+.+
T Consensus       146 ~l~~~~~t~ifyEsp~Rl~~~L~~l~~~~g~r~i~~arELTK~~E~~~~g~~~e~~~~~~~  206 (276)
T TIGR00096       146 YIAEERTTVFFYESHHRLLTTLTDLNVFLGSERFVGAAELTKKESEYWFGTVGQLLPDITE  206 (276)
T ss_pred             HHhCCCCeEEEEECcHhHHHHHHHHHHhcCCceEEEEEecCCCceEEEeCCHHHHHHHHHh
Confidence            6777788999988765321            11223666 888888888999999888754

No member of this family is characterized, but Pfam model pfam00590 (tetrapyrrole methylase) demonstrates homology between this family and its other members, which include several methylases for the tetrapyrrole class of compound, as well as the enzyme diphthine synthase.

>KOG1527 consensus Uroporphyrin III methyltransferase [Coenzyme transport and metabolism]

Probab=99.82  E-value=1.1e-19  Score=159.60  Aligned_cols=136  Identities=19%  Similarity=0.270  Sum_probs=108.3

Q ss_pred             EEEEecCCCCcchhhHHHHHHHHhCCEEEEeCcccccccCCCcchhhHHhhHh-CCCeee------cChhhHHHHHHHHH
Q 027097            2 LYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLY-GKPIAL------ADREMVEEKADKIL   74 (228)
Q Consensus         2 l~iVG~GpG~~~~lT~~A~~~L~~aDvV~~~~~~s~l~~~~~~~~~~~l~~~~-~~~i~~------~~~~~~e~~~~~i~   74 (228)
                      +|+||.|||+|++||++|+++|++||+++++.-.       ...   .++-.. +.+..+      ......++..+..+
T Consensus       258 i~LvGsGPGsp~lLT~~A~~~I~sAD~~LaDkLV-------p~a---vL~Lipp~t~lfia~KfpGna~raQ~Elh~~~l  327 (506)
T KOG1527|consen  258 IYLVGSGPGSPELLTLKAVRVIQSADLLLADKLV-------PNA---VLELIPPDTRLFIAGKFPGNASRAQEELHELLL  327 (506)
T ss_pred             EEEEccCCCChhheeHHHHHHHhhcceehhhhcc-------cHH---HHhhcCCCCceEEeecCCCchhHHHHHHHHHHH
Confidence            7999999999999999999999999999987532       222   333222 222221      11223555666667


Q ss_pred             HHcCC-CcEEEEecCCCCCcccHHHHHHHHHhCCCcEEEECCCCHHhHHH-HhCCccccCCceeEEecccCCCCC
Q 027097           75 SESQE-SNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNAVG-ICGLQLYRFGETVSIPFFTETWRP  147 (228)
Q Consensus        75 ~~a~~-~~Va~l~~GDP~~~~~~~~l~~~~~~~gi~v~viPGiSs~~a~a-~~Gl~l~~~~~~~~v~~~~~~~~p  147 (228)
                      +.+.+ -.|++|..|||++|+++.+.+..+++.|+...|||||||..+++ .+|+|.++.|..-.+.+.+++++.
T Consensus       328 ~~l~~G~~VVRLKqGDPyifGRGGEE~~Ff~qhGy~p~ViPGIssal~~~~~agIP~ThRgvAdqvl~cTGtgrK  402 (506)
T KOG1527|consen  328 NFLEAGATVVRLKQGDPYIFGRGGEEMDFFQQHGYRPQVIPGISSALGIAAEAGIPLTHRGVADQVLFCTGTGRK  402 (506)
T ss_pred             HHHhCCCEEEEecCCCceeecCCchhhhhHHhCCceeEeccchhhhhhhhHhcCCCcccccccceEEEEeccCCC
Confidence            77766 68999999999999999999999999999999999999988764 699999999999999999988874

>COG3956 Protein containing tetrapyrrole methyltransferase domain and MazG-like (predicted pyrophosphatase) domain [General function prediction only]

Probab=99.25  E-value=5.1e-11  Score=104.92  Aligned_cols=119  Identities=24%  Similarity=0.420  Sum_probs=89.1

Q ss_pred             CEEEEecCCCCcchhhHHHHHHHHhCCEEEEeCcccccccCCCcchhhHHhhHh--CCCeeecC---------hhhHHHH
Q 027097            1 MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLY--GKPIALAD---------REMVEEK   69 (228)
Q Consensus         1 ml~iVG~GpG~~~~lT~~A~~~L~~aDvV~~~~~~s~l~~~~~~~~~~~l~~~~--~~~i~~~~---------~~~~e~~   69 (228)
                      |+.+||+|+|+.+.||+.-.++|+++|.+|+.+..-        .   .++.+.  +..+.+.|         ...|+.+
T Consensus         4 ~ItvVGLG~g~~d~L~lGi~k~lknqd~ly~RTkdH--------P---viE~l~~e~~~f~~fD~iYE~heqFe~VYd~I   72 (488)
T COG3956           4 TITVVGLGAGDKDQLTLGIYKLLKNQDNLYVRTKDH--------P---VIEELDEEGIKFSFFDDIYETHEQFEAVYDFI   72 (488)
T ss_pred             eEEEEeeCCCchhhcchHHHHHHhccceEEEecCCC--------c---hHHHHHhhcceeeehhHHHhhhhhHHHHHHHH
Confidence            689999999999999999999999999999765421        1   233222  22233221         2336677


Q ss_pred             HHHHHHHcCCCcEEEEecCCCCCcccHHHHHHHH-HhCCCcEEEECCCCHHhHH-HHhCCccc
Q 027097           70 ADKILSESQESNVAFLVVGDPFGATTHTDLVVRA-KKLGIQVKAVHNASVMNAV-GICGLQLY  130 (228)
Q Consensus        70 ~~~i~~~a~~~~Va~l~~GDP~~~~~~~~l~~~~-~~~gi~v~viPGiSs~~a~-a~~Gl~l~  130 (228)
                      ++.+++.|++|++++.+||+|+++.+...++.++ .+.++.|.|.||.|.+.++ .++.+...
T Consensus        73 ~~~LveaAkekdIvYAVPGHP~VAEktVqlL~e~~ek~ni~Vkilgg~SFiD~~fealkiDPv  135 (488)
T COG3956          73 AADLVEAAKEKDIVYAVPGHPLVAEKTVQLLIEACEKENIKVKILGGQSFIDALFEALKIDPV  135 (488)
T ss_pred             HHHHHHhhcccceEEecCCCchhHHHHHHHHHHHHhccCceEEEeCcchhHHHHHHHhcCCcc
Confidence            8888888888999999999999997776766654 5578999999999999875 45444433

>COG0391 Uncharacterized conserved protein [Function unknown]

Probab=80.13  E-value=24  Score=31.80  Aligned_cols=29  Identities=17%  Similarity=0.171  Sum_probs=19.6

Q ss_pred             EEEecCCCCcchhhHHHHHHHHhCCEEE-EeCc
Q 027097            3 YIIGLGLGDERDITLRGLEAVKKCDKVY-IEAY   34 (228)
Q Consensus         3 ~iVG~GpG~~~~lT~~A~~~L~~aDvV~-~~~~   34 (228)
                      +++|  |-+| .-+.+|+++|++||+|+ .|+.
T Consensus       170 ~~~~--~~~~-~a~~eaveAI~~AD~IviGPgS  199 (323)
T COG0391         170 RLEG--PEKP-SAAPEAVEAIKEADLIVIGPGS  199 (323)
T ss_pred             EEec--CCCC-CCCHHHHHHHHhCCEEEEcCCc
Confidence            4444  4343 57889999999999554 4444

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	228
3i4t_A	292	Crystal Structure Of Putative Diphthine Synthase Fr		6e-67
2dv4_A	265	Crystal Structure Of Leu65 To Gln Mutant Of Diphthi		2e-39
2ehc_A	265	Crystal Structure Of Asn69 To Lys Mutant Of Diphthi		2e-39
2egl_A	265	Crystal Structure Of Glu171 To Lys Mutant Of Diphth		3e-39
2dv3_A	265	Crystal Structure Of Leu65 To Arg Mutant Of Diphthi		3e-39
2dv5_A	265	Crystal Structure Of Leu65 To Ala Mutant Of Diphthi		4e-39
2dsi_A	265	Crystal Structure Of Glu171 To Arg Mutant Of Diphth		5e-39
2eh2_A	265	Mutant V18m Structure Of Ph0725 From Pyrococcus Hor		5e-39
2egb_A	265	Crystal Structure Of Glu140 To Asn Mutant Of Diphth		5e-39
2pb5_A	265	Crystal Structure Of Ph0725 From Pyrococcus Horikos		6e-39
2emr_A	265	Mutant L65m Structure Of Ph0725 From Pyrococcus Hor		6e-39
2p5f_A	265	Crystal Structure Of Ph0725 From Pyrococcus Horikos		6e-39
2p9d_A	265	Crystal Structure Of Ph0725 From Pyrococcus Horikos		6e-39
2ek2_A	265	Structural Study Of Project Id Ph0725 From Pyrococc		7e-39
2ed3_A	265	Mutant I127m Structure Of Ph0725 From Pyrococcus Ho		7e-39
2eeq_A	265	Mutant Y29m Structure Of Ph0725 From Pyrococcus Hor		7e-39
2ejz_A	265	Structural Study Of Project Id Ph0725 From Pyrococc		7e-39
2p6i_A	265	Crystal Structure Of Ph0725 From Pyrococcus Horikos		7e-39
2e17_A	265	Crystal Structure Of Arg173 To Ala Mutant Of Diphth		7e-39
2pck_A	265	Crystal Structure Of Ph0725 From Pyrococcus Horikos		7e-39
2e4n_A	265	Mutant V251m Structure Of Ph0725 From Pyrococcus Ho		7e-39
2owg_A	265	Crystal Structure Of Ph0725 From Pyrococcus Horikos		8e-39
2e8h_A	265	Crystal Structure Of Ph0725 From Pyrococcus Horikos		8e-39
2e4r_A	265	Mutant I253m Structure Of Ph0725 From Pyrococcus Ho		8e-39
2hux_A	265	Crystal Structure Of Ph0725 From Pyrococcus Horikos		8e-39
2pcg_A	265	Crystal Structure Of Ph0725 From Pyrococcus Horikos		8e-39
2el3_A	265	Structural Study Of Project Id Ph0725 From Pyrococc		8e-39
2el2_A	265	Structural Study Of Project Id Ph0725 From Pyrococc		8e-39
2eka_A	265	Structural Study Of Project Id Ph0725 From Pyrococc		8e-39
2eh5_A	265	Mutant L184m Structure Of Ph0725 From Pyrococcus Ho		8e-39
2egs_A	265	Crystal Structure Of Leu261 To Met Mutant Of Diphth		8e-39
2e08_A	265	Crystal Structure Of Glu140 To Lys Mutant Of Diphth		8e-39
2eni_A	265	Mutant F197m Structure Of Ph0725 From Pyrococcus Ho		8e-39
2hr8_A	265	Crystal Structure Of Ph0725 From Pyrococcus Horikos		8e-39
2dxw_A	265	Crystal Structure Of Glu54 To Lys Mutant Of Diphthi		8e-39
2e15_A	265	Crystal Structure Of Arg173 To Asn Mutant Of Diphth		8e-39
1wng_A	265	Structural Study Of Project Id Ph0725 From Pyrococc		8e-39
2p5c_A	265	Crystal Structure Of Ph0725 From Pyrococcus Horikos		8e-39
2e16_A	265	Crystal Structure Of Glu140 To Arg Mutant Of Diphth		8e-39
2pch_A	265	Crystal Structure Of Ph0725 From Pyrococcus Horikos		8e-39
2en5_A	265	Mutant R262h Structure Of Ph0725 From Pyrococcus Ho		8e-39
2dv7_A	265	Crystal Structure Of Lys187 To Arg Mutant Of Diphth		8e-39
2dxv_A	265	Crystal Structure Of Glu54 To His Mutant Of Diphthi		9e-39
2eh4_A	265	Mutant T146m Structure Of Ph0725 From Pyrococcus Ho		9e-39
2pb6_A	265	Crystal Structure Of Ph0725 From Pyrococcus Horikos		1e-38
2e7r_A	265	Crystal Structure Of Glu54 To Arg Mutant Of Diphthi		1e-38
2owu_A	265	Crystal Structure Of Ph0725 From Pyrococcus Horikos		1e-38
2ehl_A	265	Crystal Structure Of Thr146 To Arg Mutant Of Diphth		1e-38
2dxx_A	265	Crystal Structure Of Asn142 To Glu Mutant Of Diphth		1e-38
2p6k_A	265	Crystal Structure Of Ph0725 From Pyrococcus Horikos		1e-38
2hut_A	265	Crystal Structure Of Ph0725 From Pyrococcus Horikos		1e-38
2pcm_A	265	Crystal Structure Of Ph0725 From Pyrococcus Horikos		1e-38
2pca_A	265	Crystal Structure Of Ph0725 From Pyrococcus Horikos		1e-38
2eld_A	265	Mutant L160m Structure Of Ph0725 From Pyrococcus Ho		1e-38
2el1_A	265	Structural Study Of Project Id Ph0725 From Pyrococc		1e-38
2el0_A	265	Structural Study Of Project Id Ph0725 From Pyrococc		1e-38
2ek7_A	265	Structural Study Of Project Id Ph0725 From Pyrococc		1e-38
2ek4_A	265	Structural Study Of Project Id Ph0725 From Pyrococc		1e-38
2ek3_A	265	Structural Study Of Project Id Ph0725 From Pyrococc		1e-38
2ejk_A	265	Mutant L38m Structure Of Ph0725 From Pyrococcus Hor		1e-38
2huq_A	265	Crystal Structure Of Ph0725 From Pyrococcus Horikos		1e-38
2e07_A	265	Crystal Structure Of Asp79 To Glu Mutant Of Diphthi		1e-38
2pb4_A	265	Crystal Structure Of Ph0725 From Pyrococcus Horikos		1e-38
2e8s_A	265	Structural Study Of Project Id Ph0725 From Pyrococc		2e-38
2z6r_A	265	Crystal Structure Of Lys49 To Arg Mutant Of Diphthi		2e-38
2dsg_A	265	Crystal Structure Of Lys26 To Arg Mutant Of Diphthi		2e-38
2ele_A	265	Mutant V18c Structure Of Ph0725 From Pyrococcus Hor		2e-38
2ejj_A	265	Mutant K129m Structure Of Ph0725 From Pyrococcus Ho		2e-38
2e8q_A	265	Structural Study Of Project Id Ph0725 From Pyrococc		2e-38
2owv_A	265	Crystal Structure Of Ph0725 From Pyrococcus Horikos		2e-38
1vce_A	265	Crystal Structure Of Project Id Ph0725 From Pyrococ		2e-38
2huv_A	265	Crystal Structure Of Ph0725 From Pyrococcus Horikos		3e-38
2ed5_A	265	Mutant S147m Structure Of Ph0725 From Pyrococcus Ho		3e-38
2e8r_A	265	Structural Study Of Project Id Ph0725 From Pyrococc		4e-38
2emu_A	265	Mutant L21h Structure Of Ph0725 From Pyrococcus Hor		4e-38
2dsh_A	265	Crystal Structure Of Lys26 To Tyr Mutant Of Diphthi		4e-38
2p6d_A	265	Crystal Structure Of Ph0725 From Pyrococcus Horikos		5e-38
2p2x_A	265	Crystal Structure Of Ph0725 From Pyrococcus Horikos		7e-38
2owf_A	265	Crystal Structure Of Ph0725 From Pyrococcus Horikos		3e-37
1vhv_A	268	Crystal Structure Of Diphthine Synthase Length = 26		2e-26
1wde_A	294	Crystal Structure Of The Conserved Hypothetical Pro		7e-18

>pdb|3I4T|A Chain A, Crystal Structure Of Putative Diphthine Synthase From Entamoeba Histolytica Length = 292

Iteration: 1
 Score =  249 bits (637), Expect = 6e-67,   Method: Compositional matrix adjust.
 Identities = 116/199 (58%), Positives = 155/199 (77%), Gaps = 5/199 (2%)
Query: 1   MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYGKPIAL 60
           MLYIIGLGL DE+DIT+RGLEAVK CD V++E YT++L   ++      LE+ YGK + +
Sbjct: 22  MLYIIGLGLYDEKDITVRGLEAVKSCDLVFLEHYTAILQCDVAK-----LEEFYGKKVII 76
Query: 61  ADREMVEEKADKILSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMN 120
            DR++VE +AD+IL  ++  NVA LVVGD +GATTH+D+ VR +K+GI+VK +HNAS+MN
Sbjct: 77  GDRDLVETEADQILEPAKTKNVALLVVGDVYGATTHSDIFVRCQKMGIEVKVIHNASIMN 136
Query: 121 AVGICGLQLYRFGETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLLDIRVKEPSLESL 180
           A+G  GLQLYRFG+TVS+ F++E WRP S+Y KIK NR   +HTL LLDI+VKE S ES+
Sbjct: 137 AIGCSGLQLYRFGQTVSVCFWSEHWRPSSYYPKIKINRDNNMHTLVLLDIKVKERSEESI 196
Query: 181 CRGKKLYEPPRYMTVNIAI 199
            +G+ ++EPPRYMT+N  I
Sbjct: 197 IKGRDIFEPPRYMTINQCI 215

>pdb|2DV4|A Chain A, Crystal Structure Of Leu65 To Gln Mutant Of Diphthine Synthase Length = 265

Iteration: 1
 Score =  159 bits (401), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 81/175 (46%), Positives = 116/175 (66%), Gaps = 5/175 (2%)
Query: 1   MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYGKPIAL 60
           +LY IGLGL DERDIT++GLE  KKCD V+ E YTSL++       L  ++KL GK I +
Sbjct: 2   VLYFIGLGLYDERDITVKGLEIAKKCDYVFAEFYTSLMA----GTTLGRIQKLIGKEIRV 57
Query: 61  ADREMVEEKADKI-LSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVM 119
             RE VE+  + I L  ++E++VAFL  GDP  ATTH +L +RAK+ G++   +H  S+ 
Sbjct: 58  LSREDVEQNFENIVLPLAKENDVAFLTPGDPLVATTHAELRIRAKRAGVESYVIHAPSIY 117
Query: 120 NAVGICGLQLYRFGETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLLDIRVKE 174
           +AVGI GL +Y+FG++ ++ +    W P S+Y+ IK N   GLHTL  LDI+ ++
Sbjct: 118 SAVGITGLHIYKFGKSATVAYPEGNWFPTSYYDVIKENAERGLHTLLFLDIKAEK 172

>pdb|2EHC|A Chain A, Crystal Structure Of Asn69 To Lys Mutant Of Diphthine Synthase Length = 265

Iteration: 1
 Score =  158 bits (399), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 82/175 (46%), Positives = 116/175 (66%), Gaps = 5/175 (2%)
Query: 1   MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYGKPIAL 60
           +LY IGLGL DERDIT++GLE  KKCD V+ E YTSL++       L  ++KL GK I +
Sbjct: 2   VLYFIGLGLYDERDITVKGLEIAKKCDYVFAEFYTSLMA----GTTLGRIQKLIGKEIRV 57
Query: 61  ADREMVEEKADKI-LSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVM 119
             RE VE   +KI L  ++E++VAFL  GDP  ATTH +L +RAK+ G++   +H  S+ 
Sbjct: 58  LSREDVELNFEKIVLPLAKENDVAFLTPGDPLVATTHAELRIRAKRAGVESYVIHAPSIY 117
Query: 120 NAVGICGLQLYRFGETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLLDIRVKE 174
           +AVGI GL +Y+FG++ ++ +    W P S+Y+ IK N   GLHTL  LDI+ ++
Sbjct: 118 SAVGITGLHIYKFGKSATVAYPEGNWFPTSYYDVIKENAERGLHTLLFLDIKAEK 172

>pdb|2EGL|A Chain A, Crystal Structure Of Glu171 To Lys Mutant Of Diphthine Synthase Length = 265

Iteration: 1
 Score =  158 bits (399), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 82/175 (46%), Positives = 115/175 (65%), Gaps = 5/175 (2%)
Query: 1   MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYGKPIAL 60
           +LY IGLGL DERDIT++GLE  KKCD V+ E YTSL++       L  ++KL GK I +
Sbjct: 2   VLYFIGLGLYDERDITVKGLEIAKKCDYVFAEFYTSLMA----GTTLGRIQKLIGKEIRV 57
Query: 61  ADREMVEEKADKI-LSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVM 119
             RE VE   + I L  ++E++VAFL  GDP  ATTH +L +RAK+ G++   +H  S+ 
Sbjct: 58  LSREDVELNFENIVLPLAKENDVAFLTPGDPLVATTHAELRIRAKRAGVESYVIHAPSIY 117
Query: 120 NAVGICGLQLYRFGETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLLDIRVKE 174
           +AVGI GL +Y+FG++ ++ +    W P S+Y+ IK N   GLHTL  LDI+ K+
Sbjct: 118 SAVGITGLHIYKFGKSATVAYPEGNWFPTSYYDVIKENAERGLHTLLFLDIKAKK 172

>pdb|2DV3|A Chain A, Crystal Structure Of Leu65 To Arg Mutant Of Diphthine Synthase Length = 265

Iteration: 1
 Score =  157 bits (398), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 81/175 (46%), Positives = 115/175 (65%), Gaps = 5/175 (2%)
Query: 1   MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYGKPIAL 60
           +LY IGLGL DERDIT++GLE  KKCD V+ E YTSL++       L  ++KL GK I +
Sbjct: 2   VLYFIGLGLYDERDITVKGLEIAKKCDYVFAEFYTSLMA----GTTLGRIQKLIGKEIRV 57
Query: 61  ADREMVEEKADKI-LSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVM 119
             RE VE   + I L  ++E++VAFL  GDP  ATTH +L +RAK+ G++   +H  S+ 
Sbjct: 58  LSREDVERNFENIVLPLAKENDVAFLTPGDPLVATTHAELRIRAKRAGVESYVIHAPSIY 117
Query: 120 NAVGICGLQLYRFGETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLLDIRVKE 174
           +AVGI GL +Y+FG++ ++ +    W P S+Y+ IK N   GLHTL  LDI+ ++
Sbjct: 118 SAVGITGLHIYKFGKSATVAYPEGNWFPTSYYDVIKENAERGLHTLLFLDIKAEK 172

>pdb|2DV5|A Chain A, Crystal Structure Of Leu65 To Ala Mutant Of Diphthine Synthase Length = 265

Iteration: 1
 Score =  157 bits (398), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 81/175 (46%), Positives = 115/175 (65%), Gaps = 5/175 (2%)
Query: 1   MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYGKPIAL 60
           +LY IGLGL DERDIT++GLE  KKCD V+ E YTSL++       L  ++KL GK I +
Sbjct: 2   VLYFIGLGLYDERDITVKGLEIAKKCDYVFAEFYTSLMA----GTTLGRIQKLIGKEIRV 57
Query: 61  ADREMVEEKADKI-LSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVM 119
             RE VE   + I L  ++E++VAFL  GDP  ATTH +L +RAK+ G++   +H  S+ 
Sbjct: 58  LSREDVEANFENIVLPLAKENDVAFLTPGDPLVATTHAELRIRAKRAGVESYVIHAPSIY 117
Query: 120 NAVGICGLQLYRFGETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLLDIRVKE 174
           +AVGI GL +Y+FG++ ++ +    W P S+Y+ IK N   GLHTL  LDI+ ++
Sbjct: 118 SAVGITGLHIYKFGKSATVAYPEGNWFPTSYYDVIKENAERGLHTLLFLDIKAEK 172

>pdb|2DSI|A Chain A, Crystal Structure Of Glu171 To Arg Mutant Of Diphthine Synthase Length = 265

Iteration: 1
 Score =  157 bits (397), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 81/175 (46%), Positives = 115/175 (65%), Gaps = 5/175 (2%)
Query: 1   MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYGKPIAL 60
           +LY IGLGL DERDIT++GLE  KKCD V+ E YTSL++       L  ++KL GK I +
Sbjct: 2   VLYFIGLGLYDERDITVKGLEIAKKCDYVFAEFYTSLMA----GTTLGRIQKLIGKEIRV 57
Query: 61  ADREMVEEKADKI-LSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVM 119
             RE VE   + I L  ++E++VAFL  GDP  ATTH +L +RAK+ G++   +H  S+ 
Sbjct: 58  LSREDVELNFENIVLPLAKENDVAFLTPGDPLVATTHAELRIRAKRAGVESYVIHAPSIY 117
Query: 120 NAVGICGLQLYRFGETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLLDIRVKE 174
           +AVGI GL +Y+FG++ ++ +    W P S+Y+ IK N   GLHTL  LDI+ ++
Sbjct: 118 SAVGITGLHIYKFGKSATVAYPEGNWFPTSYYDVIKENAERGLHTLLFLDIKARK 172

>pdb|2EH2|A Chain A, Mutant V18m Structure Of Ph0725 From Pyrococcus Horikoshii Ot3 Length = 265

Iteration: 1
 Score =  157 bits (396), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 81/175 (46%), Positives = 115/175 (65%), Gaps = 5/175 (2%)
Query: 1   MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYGKPIAL 60
           +LY IGLGL DERDIT++GLE  KKCD V+ E YTSL++       L  ++KL GK I +
Sbjct: 2   VLYFIGLGLYDERDITMKGLEIAKKCDYVFAEFYTSLMA----GTTLGRIQKLIGKEIRV 57
Query: 61  ADREMVEEKADKI-LSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVM 119
             RE VE   + I L  ++E++VAFL  GDP  ATTH +L +RAK+ G++   +H  S+ 
Sbjct: 58  LSREDVELNFENIVLPLAKENDVAFLTPGDPLVATTHAELRIRAKRAGVESYVIHAPSIY 117
Query: 120 NAVGICGLQLYRFGETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLLDIRVKE 174
           +AVGI GL +Y+FG++ ++ +    W P S+Y+ IK N   GLHTL  LDI+ ++
Sbjct: 118 SAVGITGLHIYKFGKSATVAYPEGNWFPTSYYDVIKENAERGLHTLLFLDIKAEK 172

>pdb|2EGB|A Chain A, Crystal Structure Of Glu140 To Asn Mutant Of Diphthine Synthase Length = 265

Iteration: 1
 Score =  157 bits (396), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 81/175 (46%), Positives = 115/175 (65%), Gaps = 5/175 (2%)
Query: 1   MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYGKPIAL 60
           +LY IGLGL DERDIT++GLE  KKCD V+ E YTSL++       L  ++KL GK I +
Sbjct: 2   VLYFIGLGLYDERDITVKGLEIAKKCDYVFAEFYTSLMA----GTTLGRIQKLIGKEIRV 57
Query: 61  ADREMVEEKADKI-LSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVM 119
             RE VE   + I L  ++E++VAFL  GDP  ATTH +L +RAK+ G++   +H  S+ 
Sbjct: 58  LSREDVELNFENIVLPLAKENDVAFLTPGDPLVATTHAELRIRAKRAGVESYVIHAPSIY 117
Query: 120 NAVGICGLQLYRFGETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLLDIRVKE 174
           +AVGI GL +Y+FG++ ++ +    W P S+Y+ IK N   GLHTL  LDI+ ++
Sbjct: 118 SAVGITGLHIYKFGKSATVAYPNGNWFPTSYYDVIKENAERGLHTLLFLDIKAEK 172

>pdb|2PB5|A Chain A, Crystal Structure Of Ph0725 From Pyrococcus Horikoshii Ot3 Length = 265

Iteration: 1
 Score =  157 bits (396), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 81/175 (46%), Positives = 115/175 (65%), Gaps = 5/175 (2%)
Query: 1   MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYGKPIAL 60
           +LY IGLGL DERDIT++GLE  KKCD V+ E YTSL++       L  ++KL GK I +
Sbjct: 2   VLYFIGLGLYDERDITVKGLEIAKKCDYVFAEFYTSLMA----GTTLGRIQKLIGKEIRV 57
Query: 61  ADREMVEEKADKI-LSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVM 119
             RE VE   + I L  ++E++VAFL  GDP  ATTH +L +RAK+ G++   +H  S+ 
Sbjct: 58  LSREDVELNFENIVLPMAKENDVAFLTPGDPLVATTHAELRIRAKRAGVESYVIHAPSIY 117
Query: 120 NAVGICGLQLYRFGETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLLDIRVKE 174
           +AVGI GL +Y+FG++ ++ +    W P S+Y+ IK N   GLHTL  LDI+ ++
Sbjct: 118 SAVGITGLHIYKFGKSATVAYPEGNWFPTSYYDVIKENAERGLHTLLFLDIKAEK 172

>pdb|2EMR|A Chain A, Mutant L65m Structure Of Ph0725 From Pyrococcus Horikoshii Ot3 Length = 265

Iteration: 1
 Score =  157 bits (396), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 81/175 (46%), Positives = 115/175 (65%), Gaps = 5/175 (2%)
Query: 1   MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYGKPIAL 60
           +LY IGLGL DERDIT++GLE  KKCD V+ E YTSL++       L  ++KL GK I +
Sbjct: 2   VLYFIGLGLYDERDITVKGLEIAKKCDYVFAEFYTSLMA----GTTLGRIQKLIGKEIRV 57
Query: 61  ADREMVEEKADKI-LSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVM 119
             RE VE   + I L  ++E++VAFL  GDP  ATTH +L +RAK+ G++   +H  S+ 
Sbjct: 58  LSREDVEMNFENIVLPLAKENDVAFLTPGDPLVATTHAELRIRAKRAGVESYVIHAPSIY 117
Query: 120 NAVGICGLQLYRFGETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLLDIRVKE 174
           +AVGI GL +Y+FG++ ++ +    W P S+Y+ IK N   GLHTL  LDI+ ++
Sbjct: 118 SAVGITGLHIYKFGKSATVAYPEGNWFPTSYYDVIKENAERGLHTLLFLDIKAEK 172

>pdb|2P5F|A Chain A, Crystal Structure Of Ph0725 From Pyrococcus Horikoshii Ot3 Length = 265

Iteration: 1
 Score =  157 bits (396), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 81/175 (46%), Positives = 116/175 (66%), Gaps = 5/175 (2%)
Query: 1   MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYGKPIAL 60
           +LY IGLGL DERDIT++GLE  KKCD V+ E YTSL++       L  ++KL GK I +
Sbjct: 2   VLYFIGLGLYDERDITVKGLEIAKKCDYVFAEFYTSLMA----GTTLGRIQKLIGKEIRV 57
Query: 61  ADREMVEEKADKI-LSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVM 119
             RE VE   + I L  ++E++VAFL  GDP  ATTH +L +RAK+ G++   +H  S+ 
Sbjct: 58  LSREDVELNFENIVLPLAKENDVAFLTPGDPLVATTHAELRIRAKRAGVESYVIHAPSIY 117
Query: 120 NAVGICGLQLYRFGETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLLDIRVKE 174
           +AVGI GL +Y+FG+++++ +    W P S+Y+ IK N   GLHTL  LDI+ ++
Sbjct: 118 SAVGITGLHIYKFGKSMTVAYPEGNWFPTSYYDVIKENAERGLHTLLFLDIKAEK 172

>pdb|2P9D|A Chain A, Crystal Structure Of Ph0725 From Pyrococcus Horikoshii Ot3 Length = 265

Iteration: 1
 Score =  157 bits (396), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 81/175 (46%), Positives = 115/175 (65%), Gaps = 5/175 (2%)
Query: 1   MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYGKPIAL 60
           +LY IGLGL DERDIT++GLE  KKCD V+ E YTSL++       L  ++KL GK I +
Sbjct: 2   VLYFIGLGLYDERDITVKGLEIAKKCDYVFAEFYTSLMA----GTTLGRIQKLIGKEIRV 57
Query: 61  ADREMVEEKADKI-LSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVM 119
             RE VE   + I L  ++E++VAFL  GDP  ATTH +L +RAK+ G++   +H  S+ 
Sbjct: 58  MSREDVELNFENIVLPLAKENDVAFLTPGDPLVATTHAELRIRAKRAGVESYVIHAPSIY 117
Query: 120 NAVGICGLQLYRFGETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLLDIRVKE 174
           +AVGI GL +Y+FG++ ++ +    W P S+Y+ IK N   GLHTL  LDI+ ++
Sbjct: 118 SAVGITGLHIYKFGKSATVAYPEGNWFPTSYYDVIKENAERGLHTLLFLDIKAEK 172

>pdb|2EK2|A Chain A, Structural Study Of Project Id Ph0725 From Pyrococcus Horikoshii Ot3 (E140m) Length = 265

Iteration: 1
 Score =  157 bits (396), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 81/175 (46%), Positives = 115/175 (65%), Gaps = 5/175 (2%)
Query: 1   MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYGKPIAL 60
           +LY IGLGL DERDIT++GLE  KKCD V+ E YTSL++       L  ++KL GK I +
Sbjct: 2   VLYFIGLGLYDERDITVKGLEIAKKCDYVFAEFYTSLMA----GTTLGRIQKLIGKEIRV 57
Query: 61  ADREMVEEKADKI-LSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVM 119
             RE VE   + I L  ++E++VAFL  GDP  ATTH +L +RAK+ G++   +H  S+ 
Sbjct: 58  LSREDVELNFENIVLPLAKENDVAFLTPGDPLVATTHAELRIRAKRAGVESYVIHAPSIY 117
Query: 120 NAVGICGLQLYRFGETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLLDIRVKE 174
           +AVGI GL +Y+FG++ ++ +    W P S+Y+ IK N   GLHTL  LDI+ ++
Sbjct: 118 SAVGITGLHIYKFGKSATVAYPMGNWFPTSYYDVIKENAERGLHTLLFLDIKAEK 172

>pdb|2ED3|A Chain A, Mutant I127m Structure Of Ph0725 From Pyrococcus Horikoshii Ot3 Length = 265

Iteration: 1
 Score =  157 bits (396), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 81/175 (46%), Positives = 115/175 (65%), Gaps = 5/175 (2%)
Query: 1   MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYGKPIAL 60
           +LY IGLGL DERDIT++GLE  KKCD V+ E YTSL++       L  ++KL GK I +
Sbjct: 2   VLYFIGLGLYDERDITVKGLEIAKKCDYVFAEFYTSLMA----GTTLGRIQKLIGKEIRV 57
Query: 61  ADREMVEEKADKI-LSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVM 119
             RE VE   + I L  ++E++VAFL  GDP  ATTH +L +RAK+ G++   +H  S+ 
Sbjct: 58  LSREDVELNFENIVLPLAKENDVAFLTPGDPLVATTHAELRIRAKRAGVESYVIHAPSIY 117
Query: 120 NAVGICGLQLYRFGETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLLDIRVKE 174
           +AVGI GL +Y+FG++ ++ +    W P S+Y+ IK N   GLHTL  LDI+ ++
Sbjct: 118 SAVGITGLHMYKFGKSATVAYPEGNWFPTSYYDVIKENAERGLHTLLFLDIKAEK 172

>pdb|2EEQ|A Chain A, Mutant Y29m Structure Of Ph0725 From Pyrococcus Horikoshii Ot3 Length = 265

Iteration: 1
 Score =  156 bits (395), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 81/175 (46%), Positives = 115/175 (65%), Gaps = 5/175 (2%)
Query: 1   MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYGKPIAL 60
           +LY IGLGL DERDIT++GLE  KKCD V+ E YTSL++       L  ++KL GK I +
Sbjct: 2   VLYFIGLGLYDERDITVKGLEIAKKCDMVFAEFYTSLMA----GTTLGRIQKLIGKEIRV 57
Query: 61  ADREMVEEKADKI-LSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVM 119
             RE VE   + I L  ++E++VAFL  GDP  ATTH +L +RAK+ G++   +H  S+ 
Sbjct: 58  LSREDVELNFENIVLPLAKENDVAFLTPGDPLVATTHAELRIRAKRAGVESYVIHAPSIY 117
Query: 120 NAVGICGLQLYRFGETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLLDIRVKE 174
           +AVGI GL +Y+FG++ ++ +    W P S+Y+ IK N   GLHTL  LDI+ ++
Sbjct: 118 SAVGITGLHIYKFGKSATVAYPEGNWFPTSYYDVIKENAERGLHTLLFLDIKAEK 172

>pdb|2EJZ|A Chain A, Structural Study Of Project Id Ph0725 From Pyrococcus Horikoshii Ot3 (y11m) Length = 265

Iteration: 1
 Score =  156 bits (395), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 81/175 (46%), Positives = 115/175 (65%), Gaps = 5/175 (2%)
Query: 1   MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYGKPIAL 60
           +LY IGLGL DERDIT++GLE  KKCD V+ E YTSL++       L  ++KL GK I +
Sbjct: 2   VLYFIGLGLMDERDITVKGLEIAKKCDYVFAEFYTSLMA----GTTLGRIQKLIGKEIRV 57
Query: 61  ADREMVEEKADKI-LSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVM 119
             RE VE   + I L  ++E++VAFL  GDP  ATTH +L +RAK+ G++   +H  S+ 
Sbjct: 58  LSREDVELNFENIVLPLAKENDVAFLTPGDPLVATTHAELRIRAKRAGVESYVIHAPSIY 117
Query: 120 NAVGICGLQLYRFGETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLLDIRVKE 174
           +AVGI GL +Y+FG++ ++ +    W P S+Y+ IK N   GLHTL  LDI+ ++
Sbjct: 118 SAVGITGLHIYKFGKSATVAYPEGNWFPTSYYDVIKENAERGLHTLLFLDIKAEK 172

>pdb|2P6I|A Chain A, Crystal Structure Of Ph0725 From Pyrococcus Horikoshii Ot3 Length = 265

Iteration: 1
 Score =  156 bits (395), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 81/175 (46%), Positives = 115/175 (65%), Gaps = 5/175 (2%)
Query: 1   MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYGKPIAL 60
           +LY IGLGL DERDIT++GLE  KKCD V+ E YTSL++       L  ++KL GK I +
Sbjct: 2   VLYFIGLGLYDERDITVKGLEIAKKCDYVFAEFYTSLMA----GTTLGRIQKLIGKEIRV 57
Query: 61  ADREMVEEKADKI-LSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVM 119
             RE VE   + I L  ++E++VAFL  GDP  ATTH +L +RAK+ G++   +H  S+ 
Sbjct: 58  LSREDVELNFENIVLPLAKENDVAFLTPGDPLVATTHAELRIRAKRAGVESYVIHAPSIY 117
Query: 120 NAVGICGLQLYRFGETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLLDIRVKE 174
           +AVGI GL +Y+FG++ ++ +    W P S+Y+ IK N   GLHTL  LDI+ ++
Sbjct: 118 SAVGITGLHIYKFGKSATVAYPEGNWFPTSYYDVIKENAERGLHTLLFLDIKAEK 172

>pdb|2E17|A Chain A, Crystal Structure Of Arg173 To Ala Mutant Of Diphthine Synthase Length = 265

Iteration: 1
 Score =  156 bits (395), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 81/175 (46%), Positives = 115/175 (65%), Gaps = 5/175 (2%)
Query: 1   MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYGKPIAL 60
           +LY IGLGL DERDIT++GLE  KKCD V+ E YTSL++       L  ++KL GK I +
Sbjct: 2   VLYFIGLGLYDERDITVKGLEIAKKCDYVFAEFYTSLMA----GTTLGRIQKLIGKEIRV 57
Query: 61  ADREMVEEKADKI-LSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVM 119
             RE VE   + I L  ++E++VAFL  GDP  ATTH +L +RAK+ G++   +H  S+ 
Sbjct: 58  LSREDVELNFENIVLPLAKENDVAFLTPGDPLVATTHAELRIRAKRAGVESYVIHAPSIY 117
Query: 120 NAVGICGLQLYRFGETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLLDIRVKE 174
           +AVGI GL +Y+FG++ ++ +    W P S+Y+ IK N   GLHTL  LDI+ ++
Sbjct: 118 SAVGITGLHIYKFGKSATVAYPEGNWFPTSYYDVIKENAERGLHTLLFLDIKAEK 172

>pdb|2PCK|A Chain A, Crystal Structure Of Ph0725 From Pyrococcus Horikoshii Ot3 Length = 265

Iteration: 1
 Score =  156 bits (395), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 81/175 (46%), Positives = 115/175 (65%), Gaps = 5/175 (2%)
Query: 1   MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYGKPIAL 60
           +LY IGLGL DERDIT++GLE  KKCD V+ E YTSL++       L  ++KL GK I +
Sbjct: 2   VLYFIGLGLYDERDITVKGLEIAKKCDYVFAEFYTSLMA----GTTLGRIQKLIGKEIRV 57
Query: 61  ADREMVEEKADKI-LSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVM 119
             RE VE   + I L  ++E++VAFL  GDP  ATTH +L +RAK+ G++   +H  S+ 
Sbjct: 58  LSREDVELNFENIVLPLAKENDVAFLTPGDPLVATTHAELRIRAKRAGVESYVIHAPSIY 117
Query: 120 NAVGICGLQLYRFGETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLLDIRVKE 174
           +AVGI GL +Y+FG++ ++ +    W P S+Y+ IK N   GLHTL  LDI+ ++
Sbjct: 118 SAVGITGLHIYKFGKSATVAYPEGNWFPTSYYDVIKENAERGLHTLLFLDIKAEK 172

>pdb|2E4N|A Chain A, Mutant V251m Structure Of Ph0725 From Pyrococcus Horikoshii Ot3 Length = 265

Iteration: 1
 Score =  156 bits (395), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 81/175 (46%), Positives = 115/175 (65%), Gaps = 5/175 (2%)
Query: 1   MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYGKPIAL 60
           +LY IGLGL DERDIT++GLE  KKCD V+ E YTSL++       L  ++KL GK I +
Sbjct: 2   VLYFIGLGLYDERDITVKGLEIAKKCDYVFAEFYTSLMA----GTTLGRIQKLIGKEIRV 57
Query: 61  ADREMVEEKADKI-LSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVM 119
             RE VE   + I L  ++E++VAFL  GDP  ATTH +L +RAK+ G++   +H  S+ 
Sbjct: 58  LSREDVELNFENIVLPLAKENDVAFLTPGDPLVATTHAELRIRAKRAGVESYVIHAPSIY 117
Query: 120 NAVGICGLQLYRFGETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLLDIRVKE 174
           +AVGI GL +Y+FG++ ++ +    W P S+Y+ IK N   GLHTL  LDI+ ++
Sbjct: 118 SAVGITGLHIYKFGKSATVAYPEGNWFPTSYYDVIKENAERGLHTLLFLDIKAEK 172

>pdb|2OWG|A Chain A, Crystal Structure Of Ph0725 From Pyrococcus Horikoshii Ot3 Length = 265

Iteration: 1
 Score =  156 bits (395), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 81/175 (46%), Positives = 115/175 (65%), Gaps = 5/175 (2%)
Query: 1   MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYGKPIAL 60
           +LY IGLGL DERDIT++GLE  KKCD V+ E YTSL++       L  ++KL GK I +
Sbjct: 2   VLYFIGLGLYDERDITVKGLEIAKKCDYVFAEFYTSLMA----GTTLGRIQKLIGKEIRV 57
Query: 61  ADREMVEEKADKI-LSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVM 119
             RE VE   + I L  ++E++VAFL  GDP  ATTH +L +RAK+ G++   +H  S+ 
Sbjct: 58  LSREDVELNFENIVLPLAKENDVAFLTPGDPLVATTHAELRIRAKRAGVESYVIHAPSIY 117
Query: 120 NAVGICGLQLYRFGETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLLDIRVKE 174
           +AVGI GL +Y+FG++ ++ +    W P S+Y+ IK N   GLHTL  LDI+ ++
Sbjct: 118 SAVGITGLHIYKFGKSATVAYPEGNWFPTSYYDVIKENAERGLHTLLFLDIKAEK 172

>pdb|2E8H|A Chain A, Crystal Structure Of Ph0725 From Pyrococcus Horikoshii Ot3 Length = 265

Iteration: 1
 Score =  156 bits (395), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 81/175 (46%), Positives = 115/175 (65%), Gaps = 5/175 (2%)
Query: 1   MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYGKPIAL 60
           +LY IGLGL DERDIT++GLE  KKCD V+ E YTSL++       L  ++KL GK I +
Sbjct: 2   VLYFIGLGLYDERDITVKGLEIAKKCDYVFAEFYTSLMA----GTTLGRIQKLIGKEIRV 57
Query: 61  ADREMVEEKADKI-LSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVM 119
             RE VE   + I L  ++E++VAFL  GDP  ATTH +L +RAK+ G++   +H  S+ 
Sbjct: 58  LSREDVELNFENIVLPLAKENDVAFLTPGDPLVATTHAELRIRAKRAGVESYVIHAPSIY 117
Query: 120 NAVGICGLQLYRFGETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLLDIRVKE 174
           +AVGI GL +Y+FG++ ++ +    W P S+Y+ IK N   GLHTL  LDI+ ++
Sbjct: 118 SAVGITGLHIYKFGKSATVAYPEGNWFPTSYYDVIKENAERGLHTLMFLDIKAEK 172

>pdb|2E4R|A Chain A, Mutant I253m Structure Of Ph0725 From Pyrococcus Horikoshii Ot3 Length = 265

Iteration: 1
 Score =  156 bits (395), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 81/175 (46%), Positives = 115/175 (65%), Gaps = 5/175 (2%)
Query: 1   MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYGKPIAL 60
           +LY IGLGL DERDIT++GLE  KKCD V+ E YTSL++       L  ++KL GK I +
Sbjct: 2   VLYFIGLGLYDERDITVKGLEIAKKCDYVFAEFYTSLMA----GTTLGRIQKLIGKEIRV 57
Query: 61  ADREMVEEKADKI-LSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVM 119
             RE VE   + I L  ++E++VAFL  GDP  ATTH +L +RAK+ G++   +H  S+ 
Sbjct: 58  LSREDVELNFENIVLPLAKENDVAFLTPGDPLVATTHAELRIRAKRAGVESYVIHAPSIY 117
Query: 120 NAVGICGLQLYRFGETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLLDIRVKE 174
           +AVGI GL +Y+FG++ ++ +    W P S+Y+ IK N   GLHTL  LDI+ ++
Sbjct: 118 SAVGITGLHIYKFGKSATVAYPEGNWFPTSYYDVIKENAERGLHTLLFLDIKAEK 172

>pdb|2HUX|A Chain A, Crystal Structure Of Ph0725 From Pyrococcus Horikoshii Ot3 Length = 265

Iteration: 1
 Score =  156 bits (395), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 81/175 (46%), Positives = 115/175 (65%), Gaps = 5/175 (2%)
Query: 1   MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYGKPIAL 60
           +LY IGLGL DERDIT++GLE  KKCD V+ E YTSL++       L  ++KL GK I +
Sbjct: 2   VLYFIGLGLYDERDITVKGLEIAKKCDYVFAEFYTSLMA----GTTLGRIQKLIGKEIRV 57
Query: 61  ADREMVEEKADKI-LSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVM 119
             RE VE   + I L  ++E++VAFL  GDP  ATTH +L +RAK+ G++   +H  S+ 
Sbjct: 58  LSREDVELNFENIVLPLAKENDVAFLTPGDPLVATTHAELRIRAKRAGVESYVIHAPSIY 117
Query: 120 NAVGICGLQLYRFGETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLLDIRVKE 174
           +AVGI GL +Y+FG++ ++ +    W P S+Y+ IK N   GLHTL  LDI+ ++
Sbjct: 118 SAVGITGLHIYKFGKSATVAYPEGNWFPTSYYDVIKENAERGLHTLLFLDIKAEK 172

>pdb|2PCG|A Chain A, Crystal Structure Of Ph0725 From Pyrococcus Horikoshii Ot3 Length = 265

Iteration: 1
 Score =  156 bits (395), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 81/175 (46%), Positives = 115/175 (65%), Gaps = 5/175 (2%)
Query: 1   MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYGKPIAL 60
           +LY IGLGL DERDIT++GLE  KKCD V+ E YTSL++       L  ++KL GK I +
Sbjct: 2   VLYFIGLGLYDERDITVKGLEIAKKCDYVFAEFYTSLMA----GTTLGRIQKLIGKEIRV 57
Query: 61  ADREMVEEKADKI-LSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVM 119
             RE VE   + I L  ++E++VAFL  GDP  ATTH +L +RAK+ G++   +H  S+ 
Sbjct: 58  LSREDVELNFENIVLPLAKENDVAFLTPGDPLVATTHAELRIRAKRAGVESYVIHAPSIY 117
Query: 120 NAVGICGLQLYRFGETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLLDIRVKE 174
           +AVGI GL +Y+FG++ ++ +    W P S+Y+ IK N   GLHTL  LDI+ ++
Sbjct: 118 SAVGITGLHIYKFGKSATVAYPEGNWFPTSYYDVIKENAERGLHTLLFLDIKAEK 172

>pdb|2EL3|A Chain A, Structural Study Of Project Id Ph0725 From Pyrococcus Horikoshii Ot3 (L242m) Length = 265

Iteration: 1
 Score =  156 bits (395), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 81/175 (46%), Positives = 115/175 (65%), Gaps = 5/175 (2%)
Query: 1   MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYGKPIAL 60
           +LY IGLGL DERDIT++GLE  KKCD V+ E YTSL++       L  ++KL GK I +
Sbjct: 2   VLYFIGLGLYDERDITVKGLEIAKKCDYVFAEFYTSLMA----GTTLGRIQKLIGKEIRV 57
Query: 61  ADREMVEEKADKI-LSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVM 119
             RE VE   + I L  ++E++VAFL  GDP  ATTH +L +RAK+ G++   +H  S+ 
Sbjct: 58  LSREDVELNFENIVLPLAKENDVAFLTPGDPLVATTHAELRIRAKRAGVESYVIHAPSIY 117
Query: 120 NAVGICGLQLYRFGETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLLDIRVKE 174
           +AVGI GL +Y+FG++ ++ +    W P S+Y+ IK N   GLHTL  LDI+ ++
Sbjct: 118 SAVGITGLHIYKFGKSATVAYPEGNWFPTSYYDVIKENAERGLHTLLFLDIKAEK 172

>pdb|2EL2|A Chain A, Structural Study Of Project Id Ph0725 From Pyrococcus Horikoshii Ot3 (l185m) Length = 265

Iteration: 1
 Score =  156 bits (395), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 81/175 (46%), Positives = 115/175 (65%), Gaps = 5/175 (2%)
Query: 1   MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYGKPIAL 60
           +LY IGLGL DERDIT++GLE  KKCD V+ E YTSL++       L  ++KL GK I +
Sbjct: 2   VLYFIGLGLYDERDITVKGLEIAKKCDYVFAEFYTSLMA----GTTLGRIQKLIGKEIRV 57
Query: 61  ADREMVEEKADKI-LSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVM 119
             RE VE   + I L  ++E++VAFL  GDP  ATTH +L +RAK+ G++   +H  S+ 
Sbjct: 58  LSREDVELNFENIVLPLAKENDVAFLTPGDPLVATTHAELRIRAKRAGVESYVIHAPSIY 117
Query: 120 NAVGICGLQLYRFGETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLLDIRVKE 174
           +AVGI GL +Y+FG++ ++ +    W P S+Y+ IK N   GLHTL  LDI+ ++
Sbjct: 118 SAVGITGLHIYKFGKSATVAYPEGNWFPTSYYDVIKENAERGLHTLLFLDIKAEK 172

>pdb|2EKA|A Chain A, Structural Study Of Project Id Ph0725 From Pyrococcus Horikoshii Ot3 (L202m) Length = 265

Iteration: 1
 Score =  156 bits (395), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 81/175 (46%), Positives = 115/175 (65%), Gaps = 5/175 (2%)
Query: 1   MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYGKPIAL 60
           +LY IGLGL DERDIT++GLE  KKCD V+ E YTSL++       L  ++KL GK I +
Sbjct: 2   VLYFIGLGLYDERDITVKGLEIAKKCDYVFAEFYTSLMA----GTTLGRIQKLIGKEIRV 57
Query: 61  ADREMVEEKADKI-LSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVM 119
             RE VE   + I L  ++E++VAFL  GDP  ATTH +L +RAK+ G++   +H  S+ 
Sbjct: 58  LSREDVELNFENIVLPLAKENDVAFLTPGDPLVATTHAELRIRAKRAGVESYVIHAPSIY 117
Query: 120 NAVGICGLQLYRFGETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLLDIRVKE 174
           +AVGI GL +Y+FG++ ++ +    W P S+Y+ IK N   GLHTL  LDI+ ++
Sbjct: 118 SAVGITGLHIYKFGKSATVAYPEGNWFPTSYYDVIKENAERGLHTLLFLDIKAEK 172

>pdb|2EH5|A Chain A, Mutant L184m Structure Of Ph0725 From Pyrococcus Horikoshii Ot3 Length = 265

Iteration: 1
 Score =  156 bits (395), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 81/175 (46%), Positives = 115/175 (65%), Gaps = 5/175 (2%)
Query: 1   MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYGKPIAL 60
           +LY IGLGL DERDIT++GLE  KKCD V+ E YTSL++       L  ++KL GK I +
Sbjct: 2   VLYFIGLGLYDERDITVKGLEIAKKCDYVFAEFYTSLMA----GTTLGRIQKLIGKEIRV 57
Query: 61  ADREMVEEKADKI-LSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVM 119
             RE VE   + I L  ++E++VAFL  GDP  ATTH +L +RAK+ G++   +H  S+ 
Sbjct: 58  LSREDVELNFENIVLPLAKENDVAFLTPGDPLVATTHAELRIRAKRAGVESYVIHAPSIY 117
Query: 120 NAVGICGLQLYRFGETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLLDIRVKE 174
           +AVGI GL +Y+FG++ ++ +    W P S+Y+ IK N   GLHTL  LDI+ ++
Sbjct: 118 SAVGITGLHIYKFGKSATVAYPEGNWFPTSYYDVIKENAERGLHTLLFLDIKAEK 172

>pdb|2EGS|A Chain A, Crystal Structure Of Leu261 To Met Mutant Of Diphthine Synthase Length = 265

Iteration: 1
 Score =  156 bits (395), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 81/175 (46%), Positives = 115/175 (65%), Gaps = 5/175 (2%)
Query: 1   MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYGKPIAL 60
           +LY IGLGL DERDIT++GLE  KKCD V+ E YTSL++       L  ++KL GK I +
Sbjct: 2   VLYFIGLGLYDERDITVKGLEIAKKCDYVFAEFYTSLMA----GTTLGRIQKLIGKEIRV 57
Query: 61  ADREMVEEKADKI-LSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVM 119
             RE VE   + I L  ++E++VAFL  GDP  ATTH +L +RAK+ G++   +H  S+ 
Sbjct: 58  LSREDVELNFENIVLPLAKENDVAFLTPGDPLVATTHAELRIRAKRAGVESYVIHAPSIY 117
Query: 120 NAVGICGLQLYRFGETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLLDIRVKE 174
           +AVGI GL +Y+FG++ ++ +    W P S+Y+ IK N   GLHTL  LDI+ ++
Sbjct: 118 SAVGITGLHIYKFGKSATVAYPEGNWFPTSYYDVIKENAERGLHTLLFLDIKAEK 172

>pdb|2E08|A Chain A, Crystal Structure Of Glu140 To Lys Mutant Of Diphthine Synthase Length = 265

Iteration: 1
 Score =  156 bits (395), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 81/175 (46%), Positives = 115/175 (65%), Gaps = 5/175 (2%)
Query: 1   MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYGKPIAL 60
           +LY IGLGL DERDIT++GLE  KKCD V+ E YTSL++       L  ++KL GK I +
Sbjct: 2   VLYFIGLGLYDERDITVKGLEIAKKCDYVFAEFYTSLMA----GTTLGRIQKLIGKEIRV 57
Query: 61  ADREMVEEKADKI-LSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVM 119
             RE VE   + I L  ++E++VAFL  GDP  ATTH +L +RAK+ G++   +H  S+ 
Sbjct: 58  LSREDVELNFENIVLPLAKENDVAFLTPGDPLVATTHAELRIRAKRAGVESYVIHAPSIY 117
Query: 120 NAVGICGLQLYRFGETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLLDIRVKE 174
           +AVGI GL +Y+FG++ ++ +    W P S+Y+ IK N   GLHTL  LDI+ ++
Sbjct: 118 SAVGITGLHIYKFGKSATVAYPKGNWFPTSYYDVIKENAERGLHTLLFLDIKAEK 172

>pdb|2ENI|A Chain A, Mutant F197m Structure Of Ph0725 From Pyrococcus Horikoshii Ot3 Length = 265

Iteration: 1
 Score =  156 bits (395), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 81/175 (46%), Positives = 115/175 (65%), Gaps = 5/175 (2%)
Query: 1   MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYGKPIAL 60
           +LY IGLGL DERDIT++GLE  KKCD V+ E YTSL++       L  ++KL GK I +
Sbjct: 2   VLYFIGLGLYDERDITVKGLEIAKKCDYVFAEFYTSLMA----GTTLGRIQKLIGKEIRV 57
Query: 61  ADREMVEEKADKI-LSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVM 119
             RE VE   + I L  ++E++VAFL  GDP  ATTH +L +RAK+ G++   +H  S+ 
Sbjct: 58  LSREDVELNFENIVLPLAKENDVAFLTPGDPLVATTHAELRIRAKRAGVESYVIHAPSIY 117
Query: 120 NAVGICGLQLYRFGETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLLDIRVKE 174
           +AVGI GL +Y+FG++ ++ +    W P S+Y+ IK N   GLHTL  LDI+ ++
Sbjct: 118 SAVGITGLHIYKFGKSATVAYPEGNWFPTSYYDVIKENAERGLHTLLFLDIKAEK 172

>pdb|2HR8|A Chain A, Crystal Structure Of Ph0725 From Pyrococcus Horikoshii Ot3 Length = 265

Iteration: 1
 Score =  156 bits (395), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 81/175 (46%), Positives = 115/175 (65%), Gaps = 5/175 (2%)
Query: 1   MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYGKPIAL 60
           +LY IGLGL DERDIT++GLE  KKCD V+ E YTSL++       L  ++KL GK I +
Sbjct: 2   VLYFIGLGLYDERDITVKGLEIAKKCDYVFAEFYTSLMA----GTTLGRIQKLIGKEIRV 57
Query: 61  ADREMVEEKADKI-LSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVM 119
             RE VE   + I L  ++E++VAFL  GDP  ATTH +L +RAK+ G++   +H  S+ 
Sbjct: 58  LSREDVELNFENIVLPLAKENDVAFLTPGDPLVATTHAELRIRAKRAGVESYVIHAPSIY 117
Query: 120 NAVGICGLQLYRFGETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLLDIRVKE 174
           +AVGI GL +Y+FG++ ++ +    W P S+Y+ IK N   GLHTL  LDI+ ++
Sbjct: 118 SAVGITGLHIYKFGKSATVAYPEGNWFPTSYYDVIKENAERGLHTLLFLDIKAEK 172

>pdb|2DXW|A Chain A, Crystal Structure Of Glu54 To Lys Mutant Of Diphthine Synthase Length = 265

Iteration: 1
 Score =  156 bits (395), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 81/175 (46%), Positives = 115/175 (65%), Gaps = 5/175 (2%)
Query: 1   MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYGKPIAL 60
           +LY IGLGL DERDIT++GLE  KKCD V+ E YTSL++       L  ++KL GK I +
Sbjct: 2   VLYFIGLGLYDERDITVKGLEIAKKCDYVFAEFYTSLMA----GTTLGRIQKLIGKKIRV 57
Query: 61  ADREMVEEKADKI-LSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVM 119
             RE VE   + I L  ++E++VAFL  GDP  ATTH +L +RAK+ G++   +H  S+ 
Sbjct: 58  LSREDVELNFENIVLPLAKENDVAFLTPGDPLVATTHAELRIRAKRAGVESYVIHAPSIY 117
Query: 120 NAVGICGLQLYRFGETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLLDIRVKE 174
           +AVGI GL +Y+FG++ ++ +    W P S+Y+ IK N   GLHTL  LDI+ ++
Sbjct: 118 SAVGITGLHIYKFGKSATVAYPEGNWFPTSYYDVIKENAERGLHTLLFLDIKAEK 172

>pdb|2E15|A Chain A, Crystal Structure Of Arg173 To Asn Mutant Of Diphthine Synthase Length = 265

Iteration: 1
 Score =  156 bits (395), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 81/175 (46%), Positives = 115/175 (65%), Gaps = 5/175 (2%)
Query: 1   MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYGKPIAL 60
           +LY IGLGL DERDIT++GLE  KKCD V+ E YTSL++       L  ++KL GK I +
Sbjct: 2   VLYFIGLGLYDERDITVKGLEIAKKCDYVFAEFYTSLMA----GTTLGRIQKLIGKEIRV 57
Query: 61  ADREMVEEKADKI-LSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVM 119
             RE VE   + I L  ++E++VAFL  GDP  ATTH +L +RAK+ G++   +H  S+ 
Sbjct: 58  LSREDVELNFENIVLPLAKENDVAFLTPGDPLVATTHAELRIRAKRAGVESYVIHAPSIY 117
Query: 120 NAVGICGLQLYRFGETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLLDIRVKE 174
           +AVGI GL +Y+FG++ ++ +    W P S+Y+ IK N   GLHTL  LDI+ ++
Sbjct: 118 SAVGITGLHIYKFGKSATVAYPEGNWFPTSYYDVIKENAERGLHTLLFLDIKAEK 172

>pdb|1WNG|A Chain A, Structural Study Of Project Id Ph0725 From Pyrococcus Horikoshii Ot3 Length = 265

Iteration: 1
 Score =  156 bits (395), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 81/175 (46%), Positives = 115/175 (65%), Gaps = 5/175 (2%)
Query: 1   MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYGKPIAL 60
           +LY IGLGL DERDIT++GLE  KKCD V+ E YTSL++       L  ++KL GK I +
Sbjct: 2   VLYFIGLGLYDERDITVKGLEIAKKCDYVFAEFYTSLMA----GTTLGRIQKLIGKEIRV 57
Query: 61  ADREMVEEKADKI-LSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVM 119
             RE VE   + I L  ++E++VAFL  GDP  ATTH +L +RAK+ G++   +H  S+ 
Sbjct: 58  LSREDVELNFENIVLPLAKENDVAFLTPGDPLVATTHAELRIRAKRAGVESYVIHAPSIY 117
Query: 120 NAVGICGLQLYRFGETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLLDIRVKE 174
           +AVGI GL +Y+FG++ ++ +    W P S+Y+ IK N   GLHTL  LDI+ ++
Sbjct: 118 SAVGITGLHIYKFGKSATVAYPEGNWFPTSYYDVIKENAERGLHTLLFLDIKAEK 172

>pdb|2P5C|A Chain A, Crystal Structure Of Ph0725 From Pyrococcus Horikoshii Ot3 Length = 265

Iteration: 1
 Score =  156 bits (395), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 81/175 (46%), Positives = 115/175 (65%), Gaps = 5/175 (2%)
Query: 1   MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYGKPIAL 60
           +LY IGLGL DERDIT++GLE  KKCD V+ E YTSL++       L  ++KL GK I +
Sbjct: 2   VLYFIGLGLYDERDITVKGLEIAKKCDYVFAEFYTSLMA----GTTLGRIQKLIGKEIRV 57
Query: 61  ADREMVEEKADKI-LSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVM 119
             RE VE   + I L  ++E++VAFL  GDP  ATTH +L +RAK+ G++   +H  S+ 
Sbjct: 58  LSREDVELNFENIVLPLAKENDVAFLTPGDPMVATTHAELRIRAKRAGVESYVIHAPSIY 117
Query: 120 NAVGICGLQLYRFGETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLLDIRVKE 174
           +AVGI GL +Y+FG++ ++ +    W P S+Y+ IK N   GLHTL  LDI+ ++
Sbjct: 118 SAVGITGLHIYKFGKSATVAYPEGNWFPTSYYDVIKENAERGLHTLLFLDIKAEK 172

>pdb|2E16|A Chain A, Crystal Structure Of Glu140 To Arg Mutant Of Diphthine Synthase Length = 265

Iteration: 1
 Score =  156 bits (395), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 81/175 (46%), Positives = 115/175 (65%), Gaps = 5/175 (2%)
Query: 1   MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYGKPIAL 60
           +LY IGLGL DERDIT++GLE  KKCD V+ E YTSL++       L  ++KL GK I +
Sbjct: 2   VLYFIGLGLYDERDITVKGLEIAKKCDYVFAEFYTSLMA----GTTLGRIQKLIGKEIRV 57
Query: 61  ADREMVEEKADKI-LSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVM 119
             RE VE   + I L  ++E++VAFL  GDP  ATTH +L +RAK+ G++   +H  S+ 
Sbjct: 58  LSREDVELNFENIVLPLAKENDVAFLTPGDPLVATTHAELRIRAKRAGVESYVIHAPSIY 117
Query: 120 NAVGICGLQLYRFGETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLLDIRVKE 174
           +AVGI GL +Y+FG++ ++ +    W P S+Y+ IK N   GLHTL  LDI+ ++
Sbjct: 118 SAVGITGLHIYKFGKSATVAYPRGNWFPTSYYDVIKENAERGLHTLLFLDIKAEK 172

>pdb|2PCH|A Chain A, Crystal Structure Of Ph0725 From Pyrococcus Horikoshii Ot3 Length = 265

Iteration: 1
 Score =  156 bits (395), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 81/175 (46%), Positives = 115/175 (65%), Gaps = 5/175 (2%)
Query: 1   MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYGKPIAL 60
           +LY IGLGL DERDIT++GLE  KKCD V+ E YTSL++       L  ++KL GK I +
Sbjct: 2   VLYFIGLGLYDERDITVKGLECAKKCDYVFAEFYTSLMA----GTTLGRIQKLIGKEIRV 57
Query: 61  ADREMVEEKADKI-LSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVM 119
             RE VE   + I L  ++E++VAFL  GDP  ATTH +L +RAK+ G++   +H  S+ 
Sbjct: 58  LSREDVELNFENIVLPLAKENDVAFLTPGDPLVATTHAELRIRAKRAGVESYVIHAPSIY 117
Query: 120 NAVGICGLQLYRFGETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLLDIRVKE 174
           +AVGI GL +Y+FG++ ++ +    W P S+Y+ IK N   GLHTL  LDI+ ++
Sbjct: 118 SAVGITGLHIYKFGKSATVAYPEGNWFPTSYYDVIKENAERGLHTLLFLDIKAEK 172

>pdb|2EN5|A Chain A, Mutant R262h Structure Of Ph0725 From Pyrococcus Horikoshii Ot3 Length = 265

Iteration: 1
 Score =  156 bits (395), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 81/175 (46%), Positives = 115/175 (65%), Gaps = 5/175 (2%)
Query: 1   MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYGKPIAL 60
           +LY IGLGL DERDIT++GLE  KKCD V+ E YTSL++       L  ++KL GK I +
Sbjct: 2   VLYFIGLGLYDERDITVKGLEIAKKCDYVFAEFYTSLMA----GTTLGRIQKLIGKEIRV 57
Query: 61  ADREMVEEKADKI-LSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVM 119
             RE VE   + I L  ++E++VAFL  GDP  ATTH +L +RAK+ G++   +H  S+ 
Sbjct: 58  LSREDVELNFENIVLPLAKENDVAFLTPGDPLVATTHAELRIRAKRAGVESYVIHAPSIY 117
Query: 120 NAVGICGLQLYRFGETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLLDIRVKE 174
           +AVGI GL +Y+FG++ ++ +    W P S+Y+ IK N   GLHTL  LDI+ ++
Sbjct: 118 SAVGITGLHIYKFGKSATVAYPEGNWFPTSYYDVIKENAERGLHTLLFLDIKAEK 172

>pdb|2DV7|A Chain A, Crystal Structure Of Lys187 To Arg Mutant Of Diphthine Synthase Length = 265

Iteration: 1
 Score =  156 bits (395), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 81/175 (46%), Positives = 115/175 (65%), Gaps = 5/175 (2%)
Query: 1   MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYGKPIAL 60
           +LY IGLGL DERDIT++GLE  KKCD V+ E YTSL++       L  ++KL GK I +
Sbjct: 2   VLYFIGLGLYDERDITVKGLEIAKKCDYVFAEFYTSLMA----GTTLGRIQKLIGKEIRV 57
Query: 61  ADREMVEEKADKI-LSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVM 119
             RE VE   + I L  ++E++VAFL  GDP  ATTH +L +RAK+ G++   +H  S+ 
Sbjct: 58  LSREDVELNFENIVLPLAKENDVAFLTPGDPLVATTHAELRIRAKRAGVESYVIHAPSIY 117
Query: 120 NAVGICGLQLYRFGETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLLDIRVKE 174
           +AVGI GL +Y+FG++ ++ +    W P S+Y+ IK N   GLHTL  LDI+ ++
Sbjct: 118 SAVGITGLHIYKFGKSATVAYPEGNWFPTSYYDVIKENAERGLHTLLFLDIKAEK 172

>pdb|2DXV|A Chain A, Crystal Structure Of Glu54 To His Mutant Of Diphthine Synthase Length = 265

Iteration: 1
 Score =  156 bits (394), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 81/175 (46%), Positives = 115/175 (65%), Gaps = 5/175 (2%)
Query: 1   MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYGKPIAL 60
           +LY IGLGL DERDIT++GLE  KKCD V+ E YTSL++       L  ++KL GK I +
Sbjct: 2   VLYFIGLGLYDERDITVKGLEIAKKCDYVFAEFYTSLMA----GTTLGRIQKLIGKHIRV 57
Query: 61  ADREMVEEKADKI-LSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVM 119
             RE VE   + I L  ++E++VAFL  GDP  ATTH +L +RAK+ G++   +H  S+ 
Sbjct: 58  LSREDVELNFENIVLPLAKENDVAFLTPGDPLVATTHAELRIRAKRAGVESYVIHAPSIY 117
Query: 120 NAVGICGLQLYRFGETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLLDIRVKE 174
           +AVGI GL +Y+FG++ ++ +    W P S+Y+ IK N   GLHTL  LDI+ ++
Sbjct: 118 SAVGITGLHIYKFGKSATVAYPEGNWFPTSYYDVIKENAERGLHTLLFLDIKAEK 172

>pdb|2EH4|A Chain A, Mutant T146m Structure Of Ph0725 From Pyrococcus Horikoshii Ot3 Length = 265

Iteration: 1
 Score =  156 bits (394), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 81/175 (46%), Positives = 115/175 (65%), Gaps = 5/175 (2%)
Query: 1   MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYGKPIAL 60
           +LY IGLGL DERDIT++GLE  KKCD V+ E YTSL++       L  ++KL GK I +
Sbjct: 2   VLYFIGLGLYDERDITVKGLEIAKKCDYVFAEFYTSLMA----GTTLGRIQKLIGKEIRV 57
Query: 61  ADREMVEEKADKI-LSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVM 119
             RE VE   + I L  ++E++VAFL  GDP  ATTH +L +RAK+ G++   +H  S+ 
Sbjct: 58  LSREDVELNFENIVLPLAKENDVAFLTPGDPLVATTHAELRIRAKRAGVESYVIHAPSIY 117
Query: 120 NAVGICGLQLYRFGETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLLDIRVKE 174
           +AVGI GL +Y+FG++ ++ +    W P S+Y+ IK N   GLHTL  LDI+ ++
Sbjct: 118 SAVGITGLHIYKFGKSATVAYPEGNWFPMSYYDVIKENAERGLHTLLFLDIKAEK 172

>pdb|2PB6|A Chain A, Crystal Structure Of Ph0725 From Pyrococcus Horikoshii Ot3 Length = 265

Iteration: 1
 Score =  156 bits (394), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 81/175 (46%), Positives = 115/175 (65%), Gaps = 5/175 (2%)
Query: 1   MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYGKPIAL 60
           +LY IGLGL DERDIT++GLE  KKCD V+ E YTSL++       L  ++KL GK I +
Sbjct: 2   VLYFIGLGLYDERDITVKGLEIAKKCDYVFAEFYTSLMA----GTTLGRIQKLIGKEIRV 57
Query: 61  ADREMVEEKADKI-LSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVM 119
             RE VE   + I L  ++E++VAFL  GDP  ATTH +L +RAK+ G++   +H  S+ 
Sbjct: 58  LSREDVELNFENIVLPLAKENDVAFLTPGDPLVATTHAELRIRAKRAGVESYVIHAPSIY 117
Query: 120 NAVGICGLQLYRFGETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLLDIRVKE 174
           +AVGI GL +Y+FG++ ++ +    W P S+Y+ IK N   GLHTL  LDI+ ++
Sbjct: 118 SAVGITGLHIYKFGKSATVAYPEGNWFPTSYYDVIKENAERGLHTLLFLDIKAEK 172

>pdb|2E7R|A Chain A, Crystal Structure Of Glu54 To Arg Mutant Of Diphthine Synthase Length = 265

Iteration: 1
 Score =  156 bits (394), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 81/175 (46%), Positives = 115/175 (65%), Gaps = 5/175 (2%)
Query: 1   MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYGKPIAL 60
           +LY IGLGL DERDIT++GLE  KKCD V+ E YTSL++       L  ++KL GK I +
Sbjct: 2   VLYFIGLGLYDERDITVKGLEIAKKCDYVFAEFYTSLMA----GTTLGRIQKLIGKRIRV 57
Query: 61  ADREMVEEKADKI-LSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVM 119
             RE VE   + I L  ++E++VAFL  GDP  ATTH +L +RAK+ G++   +H  S+ 
Sbjct: 58  LSREDVELNFENIVLPLAKENDVAFLTPGDPLVATTHAELRIRAKRAGVESYVIHAPSIY 117
Query: 120 NAVGICGLQLYRFGETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLLDIRVKE 174
           +AVGI GL +Y+FG++ ++ +    W P S+Y+ IK N   GLHTL  LDI+ ++
Sbjct: 118 SAVGITGLHIYKFGKSATVAYPEGNWFPTSYYDVIKENAERGLHTLLFLDIKAEK 172

>pdb|2OWU|A Chain A, Crystal Structure Of Ph0725 From Pyrococcus Horikoshii Ot3 Length = 265

Iteration: 1
 Score =  156 bits (394), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 81/175 (46%), Positives = 115/175 (65%), Gaps = 5/175 (2%)
Query: 1   MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYGKPIAL 60
           +LY IGLGL DERDIT++GLE  KKCD V+ E YTSL++       L  ++KL GK I +
Sbjct: 2   VLYFIGLGLYDERDITVKGLEIAKKCDYVFAEFYTSLMA----GTTLGRIQKLIGKEIRV 57
Query: 61  ADREMVEEKADKI-LSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVM 119
             RE VE   + I L  ++E++VAFL  GDP  ATTH +L +RAK+ G++   +H  S+ 
Sbjct: 58  LSREDVELNFENIVLPLAKENDVAFLTPGDPLVATTHAELRIRAKRAGVESYVIHAPSIY 117
Query: 120 NAVGICGLQLYRFGETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLLDIRVKE 174
           +AVGI GL +Y+FG++ ++ +    W P S+Y+ IK N   GLHTL  LDI+ ++
Sbjct: 118 SAVGITGLMIYKFGKSATVAYPEGNWFPTSYYDVIKENAERGLHTLLFLDIKAEK 172

>pdb|2EHL|A Chain A, Crystal Structure Of Thr146 To Arg Mutant Of Diphthine Synthase Length = 265

Iteration: 1
 Score =  156 bits (394), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 81/175 (46%), Positives = 115/175 (65%), Gaps = 5/175 (2%)
Query: 1   MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYGKPIAL 60
           +LY IGLGL DERDIT++GLE  KKCD V+ E YTSL++       L  ++KL GK I +
Sbjct: 2   VLYFIGLGLYDERDITVKGLEIAKKCDYVFAEFYTSLMA----GTTLGRIQKLIGKEIRV 57
Query: 61  ADREMVEEKADKI-LSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVM 119
             RE VE   + I L  ++E++VAFL  GDP  ATTH +L +RAK+ G++   +H  S+ 
Sbjct: 58  LSREDVELNFENIVLPLAKENDVAFLTPGDPLVATTHAELRIRAKRAGVESYVIHAPSIY 117
Query: 120 NAVGICGLQLYRFGETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLLDIRVKE 174
           +AVGI GL +Y+FG++ ++ +    W P S+Y+ IK N   GLHTL  LDI+ ++
Sbjct: 118 SAVGITGLHIYKFGKSATVAYPEGNWFPRSYYDVIKENAERGLHTLLFLDIKAEK 172

>pdb|2DXX|A Chain A, Crystal Structure Of Asn142 To Glu Mutant Of Diphthine Synthase Length = 265

Iteration: 1
 Score =  156 bits (394), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 81/175 (46%), Positives = 115/175 (65%), Gaps = 5/175 (2%)
Query: 1   MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYGKPIAL 60
           +LY IGLGL DERDIT++GLE  KKCD V+ E YTSL++       L  ++KL GK I +
Sbjct: 2   VLYFIGLGLYDERDITVKGLEIAKKCDYVFAEFYTSLMA----GTTLGRIQKLIGKEIRV 57
Query: 61  ADREMVEEKADKI-LSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVM 119
             RE VE   + I L  ++E++VAFL  GDP  ATTH +L +RAK+ G++   +H  S+ 
Sbjct: 58  LSREDVELNFENIVLPLAKENDVAFLTPGDPLVATTHAELRIRAKRAGVESYVIHAPSIY 117
Query: 120 NAVGICGLQLYRFGETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLLDIRVKE 174
           +AVGI GL +Y+FG++ ++ +    W P S+Y+ IK N   GLHTL  LDI+ ++
Sbjct: 118 SAVGITGLHIYKFGKSATVAYPEGEWFPTSYYDVIKENAERGLHTLLFLDIKAEK 172

>pdb|2P6K|A Chain A, Crystal Structure Of Ph0725 From Pyrococcus Horikoshii Ot3 Length = 265

Iteration: 1
 Score =  155 bits (393), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 81/175 (46%), Positives = 115/175 (65%), Gaps = 5/175 (2%)
Query: 1   MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYGKPIAL 60
           +LY IGLGL DERDIT++GLE  KKCD V+ E YTSL++       L  ++KL GK I +
Sbjct: 2   VLYFIGLGLYDERDITVKGLEIAKKCDYVFAEFYTSLMA----GTTLGRIQKLIGKEIRV 57
Query: 61  ADREMVEEKADKI-LSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVM 119
             RE VE   + I L  ++E++VAFL  GDP  ATTH +L +RAK+ G++   +H  S+ 
Sbjct: 58  LSREDVELNFENIVLPLAKENDVAFLTPGDPLVATTHAELRIRAKRAGVESYVIHAPSIY 117
Query: 120 NAVGICGLQLYRFGETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLLDIRVKE 174
           +AVGI GL +Y+FG++ ++ +    W P S+Y+ IK N   GLHTL  LDI+ ++
Sbjct: 118 SAVGITGLHIYKFGKSATVMYPEGNWFPTSYYDVIKENAERGLHTLLFLDIKAEK 172

>pdb|2HUT|A Chain A, Crystal Structure Of Ph0725 From Pyrococcus Horikoshii Ot3 Length = 265

Iteration: 1
 Score =  155 bits (393), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 80/175 (45%), Positives = 115/175 (65%), Gaps = 5/175 (2%)
Query: 1   MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYGKPIAL 60
           +LY IGLGL DERDIT++GLE  KKCD V+ E YTSL++       L  ++KL GK I +
Sbjct: 2   VLYFIGLGLYDERDITVKGLEIAKKCDYVFAEFYTSLMA----GTTLGRIQKLIGKEIRV 57
Query: 61  ADREMVEEKADKILSE-SQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVM 119
             RE VE   + I+   ++E++VAFL  GDP  ATTH +L +RAK+ G++   +H  S+ 
Sbjct: 58  LSREDVELNFENIVMPLAKENDVAFLTPGDPLVATTHAELRIRAKRAGVESYVIHAPSIY 117
Query: 120 NAVGICGLQLYRFGETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLLDIRVKE 174
           +AVGI GL +Y+FG++ ++ +    W P S+Y+ IK N   GLHTL  LDI+ ++
Sbjct: 118 SAVGITGLHIYKFGKSATVAYPEGNWFPTSYYDVIKENAERGLHTLLFLDIKAEK 172

>pdb|2PCM|A Chain A, Crystal Structure Of Ph0725 From Pyrococcus Horikoshii Ot3 Length = 265

Iteration: 1
 Score =  155 bits (393), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 80/175 (45%), Positives = 115/175 (65%), Gaps = 5/175 (2%)
Query: 1   MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYGKPIAL 60
           +LY IGLGL DERDIT++GLE  KKCD V+ E YTSL++       L  ++K+ GK I +
Sbjct: 2   VLYFIGLGLYDERDITVKGLEIAKKCDYVFAEFYTSLMA----GTTLGRIQKMIGKEIRV 57
Query: 61  ADREMVEEKADKI-LSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVM 119
             RE VE   + I L  ++E++VAFL  GDP  ATTH +L +RAK+ G++   +H  S+ 
Sbjct: 58  LSREDVELNFENIVLPLAKENDVAFLTPGDPLVATTHAELRIRAKRAGVESYVIHAPSIY 117
Query: 120 NAVGICGLQLYRFGETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLLDIRVKE 174
           +AVGI GL +Y+FG++ ++ +    W P S+Y+ IK N   GLHTL  LDI+ ++
Sbjct: 118 SAVGITGLHIYKFGKSATVAYPEGNWFPTSYYDVIKENAERGLHTLLFLDIKAEK 172

>pdb|2PCA|A Chain A, Crystal Structure Of Ph0725 From Pyrococcus Horikoshii Ot3 Length = 265

Iteration: 1
 Score =  155 bits (393), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 80/175 (45%), Positives = 115/175 (65%), Gaps = 5/175 (2%)
Query: 1   MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYGKPIAL 60
           +LY IGLGL DERDIT++GLE  KKCD V+ E YTSL++       L  ++KL GK I +
Sbjct: 2   VLYFIGLGLYDERDITVKGLEIAKKCDYVFAEFYTSLMA----GTTLGRIQKLIGKEIRV 57
Query: 61  ADREMVEEKADKI-LSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVM 119
             RE VE   + I L  ++E++VAF+  GDP  ATTH +L +RAK+ G++   +H  S+ 
Sbjct: 58  LSREDVELNFENIVLPLAKENDVAFMTPGDPLVATTHAELRIRAKRAGVESYVIHAPSIY 117
Query: 120 NAVGICGLQLYRFGETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLLDIRVKE 174
           +AVGI GL +Y+FG++ ++ +    W P S+Y+ IK N   GLHTL  LDI+ ++
Sbjct: 118 SAVGITGLHIYKFGKSATVAYPEGNWFPTSYYDVIKENAERGLHTLLFLDIKAEK 172

>pdb|2ELD|A Chain A, Mutant L160m Structure Of Ph0725 From Pyrococcus Horikoshii Ot3 Length = 265

Iteration: 1
 Score =  155 bits (393), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 80/175 (45%), Positives = 115/175 (65%), Gaps = 5/175 (2%)
Query: 1   MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYGKPIAL 60
           +LY IGLGL DERDIT++GLE  KKCD V+ E YTSL++       L  ++KL GK I +
Sbjct: 2   VLYFIGLGLYDERDITVKGLEIAKKCDYVFAEFYTSLMA----GTTLGRIQKLIGKEIRV 57
Query: 61  ADREMVEEKADKI-LSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVM 119
             RE VE   + I L  ++E++VAFL  GDP  ATTH +L +RAK+ G++   +H  S+ 
Sbjct: 58  LSREDVELNFENIVLPLAKENDVAFLTPGDPLVATTHAELRIRAKRAGVESYVIHAPSIY 117
Query: 120 NAVGICGLQLYRFGETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLLDIRVKE 174
           +AVGI GL +Y+FG++ ++ +    W P S+Y+ IK N   G+HTL  LDI+ ++
Sbjct: 118 SAVGITGLHIYKFGKSATVAYPEGNWFPTSYYDVIKENAERGMHTLLFLDIKAEK 172

>pdb|2EL1|A Chain A, Structural Study Of Project Id Ph0725 From Pyrococcus Horikoshii Ot3 (L44m) Length = 265

Iteration: 1
 Score =  155 bits (393), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 80/175 (45%), Positives = 115/175 (65%), Gaps = 5/175 (2%)
Query: 1   MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYGKPIAL 60
           +LY IGLGL DERDIT++GLE  KKCD V+ E YTSL++       +  ++KL GK I +
Sbjct: 2   VLYFIGLGLYDERDITVKGLEIAKKCDYVFAEFYTSLMA----GTTMGRIQKLIGKEIRV 57
Query: 61  ADREMVEEKADKI-LSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVM 119
             RE VE   + I L  ++E++VAFL  GDP  ATTH +L +RAK+ G++   +H  S+ 
Sbjct: 58  LSREDVELNFENIVLPLAKENDVAFLTPGDPLVATTHAELRIRAKRAGVESYVIHAPSIY 117
Query: 120 NAVGICGLQLYRFGETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLLDIRVKE 174
           +AVGI GL +Y+FG++ ++ +    W P S+Y+ IK N   GLHTL  LDI+ ++
Sbjct: 118 SAVGITGLHIYKFGKSATVAYPEGNWFPTSYYDVIKENAERGLHTLLFLDIKAEK 172

>pdb|2EL0|A Chain A, Structural Study Of Project Id Ph0725 From Pyrococcus Horikoshii Ot3 (L21m) Length = 265

Iteration: 1
 Score =  155 bits (393), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 80/175 (45%), Positives = 115/175 (65%), Gaps = 5/175 (2%)
Query: 1   MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYGKPIAL 60
           +LY IGLGL DERDIT++G+E  KKCD V+ E YTSL++       L  ++KL GK I +
Sbjct: 2   VLYFIGLGLYDERDITVKGMEIAKKCDYVFAEFYTSLMA----GTTLGRIQKLIGKEIRV 57
Query: 61  ADREMVEEKADKI-LSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVM 119
             RE VE   + I L  ++E++VAFL  GDP  ATTH +L +RAK+ G++   +H  S+ 
Sbjct: 58  LSREDVELNFENIVLPLAKENDVAFLTPGDPLVATTHAELRIRAKRAGVESYVIHAPSIY 117
Query: 120 NAVGICGLQLYRFGETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLLDIRVKE 174
           +AVGI GL +Y+FG++ ++ +    W P S+Y+ IK N   GLHTL  LDI+ ++
Sbjct: 118 SAVGITGLHIYKFGKSATVAYPEGNWFPTSYYDVIKENAERGLHTLLFLDIKAEK 172

>pdb|2EK7|A Chain A, Structural Study Of Project Id Ph0725 From Pyrococcus Horikoshii Ot3 (L163m) Length = 265

Iteration: 1
 Score =  155 bits (393), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 80/175 (45%), Positives = 115/175 (65%), Gaps = 5/175 (2%)
Query: 1   MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYGKPIAL 60
           +LY IGLGL DERDIT++GLE  KKCD V+ E YTSL++       L  ++KL GK I +
Sbjct: 2   VLYFIGLGLYDERDITVKGLEIAKKCDYVFAEFYTSLMA----GTTLGRIQKLIGKEIRV 57
Query: 61  ADREMVEEKADKI-LSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVM 119
             RE VE   + I L  ++E++VAFL  GDP  ATTH +L +RAK+ G++   +H  S+ 
Sbjct: 58  LSREDVELNFENIVLPLAKENDVAFLTPGDPLVATTHAELRIRAKRAGVESYVIHAPSIY 117
Query: 120 NAVGICGLQLYRFGETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLLDIRVKE 174
           +AVGI GL +Y+FG++ ++ +    W P S+Y+ IK N   GLHT+  LDI+ ++
Sbjct: 118 SAVGITGLHIYKFGKSATVAYPEGNWFPTSYYDVIKENAERGLHTMLFLDIKAEK 172

>pdb|2EK4|A Chain A, Structural Study Of Project Id Ph0725 From Pyrococcus Horikoshii Ot3 (L8m) Length = 265

Iteration: 1
 Score =  155 bits (393), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 80/175 (45%), Positives = 115/175 (65%), Gaps = 5/175 (2%)
Query: 1   MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYGKPIAL 60
           +LY IG+GL DERDIT++GLE  KKCD V+ E YTSL++       L  ++KL GK I +
Sbjct: 2   VLYFIGMGLYDERDITVKGLEIAKKCDYVFAEFYTSLMA----GTTLGRIQKLIGKEIRV 57
Query: 61  ADREMVEEKADKI-LSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVM 119
             RE VE   + I L  ++E++VAFL  GDP  ATTH +L +RAK+ G++   +H  S+ 
Sbjct: 58  LSREDVELNFENIVLPLAKENDVAFLTPGDPLVATTHAELRIRAKRAGVESYVIHAPSIY 117
Query: 120 NAVGICGLQLYRFGETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLLDIRVKE 174
           +AVGI GL +Y+FG++ ++ +    W P S+Y+ IK N   GLHTL  LDI+ ++
Sbjct: 118 SAVGITGLHIYKFGKSATVAYPEGNWFPTSYYDVIKENAERGLHTLLFLDIKAEK 172

>pdb|2EK3|A Chain A, Structural Study Of Project Id Ph0725 From Pyrococcus Horikoshii Ot3 (L3m) Length = 265

Iteration: 1
 Score =  155 bits (393), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 80/175 (45%), Positives = 115/175 (65%), Gaps = 5/175 (2%)
Query: 1   MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYGKPIAL 60
           ++Y IGLGL DERDIT++GLE  KKCD V+ E YTSL++       L  ++KL GK I +
Sbjct: 2   VMYFIGLGLYDERDITVKGLEIAKKCDYVFAEFYTSLMA----GTTLGRIQKLIGKEIRV 57
Query: 61  ADREMVEEKADKI-LSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVM 119
             RE VE   + I L  ++E++VAFL  GDP  ATTH +L +RAK+ G++   +H  S+ 
Sbjct: 58  LSREDVELNFENIVLPLAKENDVAFLTPGDPLVATTHAELRIRAKRAGVESYVIHAPSIY 117
Query: 120 NAVGICGLQLYRFGETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLLDIRVKE 174
           +AVGI GL +Y+FG++ ++ +    W P S+Y+ IK N   GLHTL  LDI+ ++
Sbjct: 118 SAVGITGLHIYKFGKSATVAYPEGNWFPTSYYDVIKENAERGLHTLLFLDIKAEK 172

>pdb|2EJK|A Chain A, Mutant L38m Structure Of Ph0725 From Pyrococcus Horikoshii Ot3 Length = 265

Iteration: 1
 Score =  155 bits (393), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 80/175 (45%), Positives = 115/175 (65%), Gaps = 5/175 (2%)
Query: 1   MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYGKPIAL 60
           +LY IGLGL DERDIT++GLE  KKCD V+ E YTS+++       L  ++KL GK I +
Sbjct: 2   VLYFIGLGLYDERDITVKGLEIAKKCDYVFAEFYTSMMA----GTTLGRIQKLIGKEIRV 57
Query: 61  ADREMVEEKADKI-LSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVM 119
             RE VE   + I L  ++E++VAFL  GDP  ATTH +L +RAK+ G++   +H  S+ 
Sbjct: 58  LSREDVELNFENIVLPLAKENDVAFLTPGDPLVATTHAELRIRAKRAGVESYVIHAPSIY 117
Query: 120 NAVGICGLQLYRFGETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLLDIRVKE 174
           +AVGI GL +Y+FG++ ++ +    W P S+Y+ IK N   GLHTL  LDI+ ++
Sbjct: 118 SAVGITGLHIYKFGKSATVAYPEGNWFPTSYYDVIKENAERGLHTLLFLDIKAEK 172

>pdb|2HUQ|A Chain A, Crystal Structure Of Ph0725 From Pyrococcus Horikoshii Ot3 Length = 265

Iteration: 1
 Score =  155 bits (393), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 80/175 (45%), Positives = 115/175 (65%), Gaps = 5/175 (2%)
Query: 1   MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYGKPIAL 60
           +LY IGLGL DERDIT++GLE  KKCD V+ E YTSL++       L  ++KL GK I +
Sbjct: 2   VLYFIGLGLYDERDITVKGLEIAKKCDYVFAEFYTSLMA----GTTLGRIQKLIGKEIRV 57
Query: 61  ADREMVEEKADKI-LSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVM 119
             RE VE   + I L  ++E++VAFL  GDP  ATTH +L +RAK+ G++   +H  S+ 
Sbjct: 58  LSREDVELNFENIVLPLAKENDVAFLTPGDPLVATTHAELRIRAKRAGVESYVIHAPSIY 117
Query: 120 NAVGICGLQLYRFGETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLLDIRVKE 174
           +AVGI G+ +Y+FG++ ++ +    W P S+Y+ IK N   GLHTL  LDI+ ++
Sbjct: 118 SAVGITGMHIYKFGKSATVAYPEGNWFPTSYYDVIKENAERGLHTLLFLDIKAEK 172

>pdb|2E07|A Chain A, Crystal Structure Of Asp79 To Glu Mutant Of Diphthine Synthase Length = 265

Iteration: 1
 Score =  155 bits (393), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 81/175 (46%), Positives = 114/175 (65%), Gaps = 5/175 (2%)
Query: 1   MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYGKPIAL 60
           +LY IGLGL DERDIT++GLE  KKCD V+ E YTSL++       L  ++KL GK I +
Sbjct: 2   VLYFIGLGLYDERDITVKGLEIAKKCDYVFAEFYTSLMA----GTTLGRIQKLIGKEIRV 57
Query: 61  ADREMVEEKADKI-LSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVM 119
             RE VE   + I L  ++E+ VAFL  GDP  ATTH +L +RAK+ G++   +H  S+ 
Sbjct: 58  LSREDVELNFENIVLPLAKENEVAFLTPGDPLVATTHAELRIRAKRAGVESYVIHAPSIY 117
Query: 120 NAVGICGLQLYRFGETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLLDIRVKE 174
           +AVGI GL +Y+FG++ ++ +    W P S+Y+ IK N   GLHTL  LDI+ ++
Sbjct: 118 SAVGITGLHIYKFGKSATVAYPEGNWFPTSYYDVIKENAERGLHTLLFLDIKAEK 172

>pdb|2PB4|A Chain A, Crystal Structure Of Ph0725 From Pyrococcus Horikoshii Ot3 Length = 265

Iteration: 1
 Score =  155 bits (393), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 81/175 (46%), Positives = 114/175 (65%), Gaps = 5/175 (2%)
Query: 1   MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYGKPIAL 60
           +LY IGLGL DERDIT++GLE  KKCD V+ E YTSL++       L  ++KL GK I +
Sbjct: 2   VLYFIGLGLYDERDITVKGLEIAKKCDYVFAEFYTSLMA----GTTLGRIQKLIGKEIRV 57
Query: 61  ADREMVEEKADKI-LSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVM 119
             RE VE   + I L  ++E++VAFL  GDP  ATTH +L +RAK+ G++   +H  S+ 
Sbjct: 58  LSREDVELNFENIVLPLAKENDVAFLTPGDPLVATTHAELRIRAKRAGVESYVIHAPSIY 117
Query: 120 NAVGICGLQLYRFGETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLLDIRVKE 174
           +AVGI GL +Y+FG + ++ +    W P S+Y+ IK N   GLHTL  LDI+ ++
Sbjct: 118 SAVGITGLHIYKFGMSATVAYPEGNWFPTSYYDVIKENAERGLHTLLFLDIKAEK 172

>pdb|2E8S|A Chain A, Structural Study Of Project Id Ph0725 From Pyrococcus Horikoshii Ot3 Length = 265

Iteration: 1
 Score =  155 bits (392), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 81/175 (46%), Positives = 114/175 (65%), Gaps = 5/175 (2%)
Query: 1   MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYGKPIAL 60
           +LY IGLGL DERDIT++GLE  KKCD V+ E YTSL++       L  ++KL GK I +
Sbjct: 2   VLYFIGLGLYDERDITVKGLEIAKKCDYVFAEFYTSLMA----GTTLGRIQKLIGKEIRV 57
Query: 61  ADREMVEEKADKI-LSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVM 119
             RE VE   + I L  ++E++VAFL  GDP  ATTH +L +RAK+ G++   +H  S+ 
Sbjct: 58  LSREDVELNFENIVLPLAKENDVAFLTPGDPLVATTHAELRIRAKRAGVESYVIHAPSIY 117
Query: 120 NAVGICGLQLYRFGETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLLDIRVKE 174
           +AVGI GL +Y+FG++  + +    W P S+Y+ IK N   GLHTL  LDI+ ++
Sbjct: 118 SAVGITGLHIYKFGKSAMVAYPEGNWFPTSYYDVIKENAERGLHTLLFLDIKAEK 172

>pdb|2Z6R|A Chain A, Crystal Structure Of Lys49 To Arg Mutant Of Diphthine Synthase Length = 265

Iteration: 1
 Score =  155 bits (392), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 80/175 (45%), Positives = 115/175 (65%), Gaps = 5/175 (2%)
Query: 1   MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYGKPIAL 60
           +LY IGLGL DERDIT++GLE  KKCD V+ E YTSL++       L  +++L GK I +
Sbjct: 2   VLYFIGLGLYDERDITVKGLEIAKKCDYVFAEFYTSLMA----GTTLGRIQRLIGKEIRV 57
Query: 61  ADREMVEEKADKI-LSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVM 119
             RE VE   + I L  ++E++VAFL  GDP  ATTH +L +RAK+ G++   +H  S+ 
Sbjct: 58  LSREDVELNFENIVLPLAKENDVAFLTPGDPLVATTHAELRIRAKRAGVESYVIHAPSIY 117
Query: 120 NAVGICGLQLYRFGETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLLDIRVKE 174
           +AVGI GL +Y+FG++ ++ +    W P S+Y+ IK N   GLHTL  LDI+ ++
Sbjct: 118 SAVGITGLHIYKFGKSATVAYPEGNWFPTSYYDVIKENAERGLHTLLFLDIKAEK 172

>pdb|2DSG|A Chain A, Crystal Structure Of Lys26 To Arg Mutant Of Diphthine Synthase Length = 265

Iteration: 1
 Score =  155 bits (392), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 80/175 (45%), Positives = 115/175 (65%), Gaps = 5/175 (2%)
Query: 1   MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYGKPIAL 60
           +LY IGLGL DERDIT++GLE  K+CD V+ E YTSL++       L  ++KL GK I +
Sbjct: 2   VLYFIGLGLYDERDITVKGLEIAKRCDYVFAEFYTSLMA----GTTLGRIQKLIGKEIRV 57
Query: 61  ADREMVEEKADKI-LSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVM 119
             RE VE   + I L  ++E++VAFL  GDP  ATTH +L +RAK+ G++   +H  S+ 
Sbjct: 58  LSREDVELNFENIVLPLAKENDVAFLTPGDPLVATTHAELRIRAKRAGVESYVIHAPSIY 117
Query: 120 NAVGICGLQLYRFGETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLLDIRVKE 174
           +AVGI GL +Y+FG++ ++ +    W P S+Y+ IK N   GLHTL  LDI+ ++
Sbjct: 118 SAVGITGLHIYKFGKSATVAYPEGNWFPTSYYDVIKENAERGLHTLLFLDIKAEK 172

>pdb|2ELE|A Chain A, Mutant V18c Structure Of Ph0725 From Pyrococcus Horikoshii Ot3 Length = 265

Iteration: 1
 Score =  155 bits (392), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 81/175 (46%), Positives = 114/175 (65%), Gaps = 5/175 (2%)
Query: 1   MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYGKPIAL 60
           +LY IGLGL DERDIT +GLE  KKCD V+ E YTSL++       L  ++KL GK I +
Sbjct: 2   VLYFIGLGLYDERDITCKGLEIAKKCDYVFAEFYTSLMA----GTTLGRIQKLIGKEIRV 57
Query: 61  ADREMVEEKADKI-LSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVM 119
             RE VE   + I L  ++E++VAFL  GDP  ATTH +L +RAK+ G++   +H  S+ 
Sbjct: 58  LSREDVELNFENIVLPLAKENDVAFLTPGDPLVATTHAELRIRAKRAGVESYVIHAPSIY 117
Query: 120 NAVGICGLQLYRFGETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLLDIRVKE 174
           +AVGI GL +Y+FG++ ++ +    W P S+Y+ IK N   GLHTL  LDI+ ++
Sbjct: 118 SAVGITGLHIYKFGKSATVAYPEGNWFPTSYYDVIKENAERGLHTLLFLDIKAEK 172

>pdb|2EJJ|A Chain A, Mutant K129m Structure Of Ph0725 From Pyrococcus Horikoshii Ot3 Length = 265

Iteration: 1
 Score =  155 bits (392), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 81/175 (46%), Positives = 114/175 (65%), Gaps = 5/175 (2%)
Query: 1   MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYGKPIAL 60
           +LY IGLGL DERDIT++GLE  KKCD V+ E YTSL++       L  ++KL GK I +
Sbjct: 2   VLYFIGLGLYDERDITVKGLEIAKKCDYVFAEFYTSLMA----GTTLGRIQKLIGKEIRV 57
Query: 61  ADREMVEEKADKI-LSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVM 119
             RE VE   + I L  ++E++VAFL  GDP  ATTH +L +RAK+ G++   +H  S+ 
Sbjct: 58  LSREDVELNFENIVLPLAKENDVAFLTPGDPLVATTHAELRIRAKRAGVESYVIHAPSIY 117
Query: 120 NAVGICGLQLYRFGETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLLDIRVKE 174
           +AVGI GL +Y FG++ ++ +    W P S+Y+ IK N   GLHTL  LDI+ ++
Sbjct: 118 SAVGITGLHIYMFGKSATVAYPEGNWFPTSYYDVIKENAERGLHTLLFLDIKAEK 172

>pdb|2E8Q|A Chain A, Structural Study Of Project Id Ph0725 From Pyrococcus Horikoshii Ot3 (K19m) Length = 265

Iteration: 1
 Score =  155 bits (392), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 81/175 (46%), Positives = 114/175 (65%), Gaps = 5/175 (2%)
Query: 1   MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYGKPIAL 60
           +LY IGLGL DERDIT+ GLE  KKCD V+ E YTSL++       L  ++KL GK I +
Sbjct: 2   VLYFIGLGLYDERDITVMGLEIAKKCDYVFAEFYTSLMA----GTTLGRIQKLIGKEIRV 57
Query: 61  ADREMVEEKADKI-LSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVM 119
             RE VE   + I L  ++E++VAFL  GDP  ATTH +L +RAK+ G++   +H  S+ 
Sbjct: 58  LSREDVELNFENIVLPLAKENDVAFLTPGDPLVATTHAELRIRAKRAGVESYVIHAPSIY 117
Query: 120 NAVGICGLQLYRFGETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLLDIRVKE 174
           +AVGI GL +Y+FG++ ++ +    W P S+Y+ IK N   GLHTL  LDI+ ++
Sbjct: 118 SAVGITGLHIYKFGKSATVAYPEGNWFPTSYYDVIKENAERGLHTLLFLDIKAEK 172

>pdb|2OWV|A Chain A, Crystal Structure Of Ph0725 From Pyrococcus Horikoshii Ot3 Length = 265

Iteration: 1
 Score =  155 bits (392), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 81/175 (46%), Positives = 114/175 (65%), Gaps = 5/175 (2%)
Query: 1   MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYGKPIAL 60
           +LY IGLGL DERDIT++GLE  KKCD V+ E YTSL++       L  ++KL GK I +
Sbjct: 2   VLYFIGLGLYDERDITVKGLEIAKKCDYVFAEFYTSLMA----GTTLGRIQKLIGKEIRV 57
Query: 61  ADREMVEEKADKI-LSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVM 119
             RE VE   + I L  ++E++VAFL  GDP  ATTH +L +RAK+ G++   +H  S+ 
Sbjct: 58  LSREDVELNFENIVLPLAKENDVAFLTPGDPLVATTHAELRIRAKRAGVESYVIHAPSIY 117
Query: 120 NAVGICGLQLYRFGETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLLDIRVKE 174
           +AVGI GL +Y+FG++ ++ +    W P S Y+ IK N   GLHTL  LDI+ ++
Sbjct: 118 SAVGITGLHIYKFGKSATVAYPEGNWFPTSMYDVIKENAERGLHTLLFLDIKAEK 172

>pdb|1VCE|A Chain A, Crystal Structure Of Project Id Ph0725 From Pyrococcus Horikoshii Ot3 Length = 265

Iteration: 1
 Score =  155 bits (391), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 82/175 (46%), Positives = 116/175 (66%), Gaps = 5/175 (2%)
Query: 1   MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYGKPIAL 60
           +LY IGLGL DERDIT++GLE  KKCD V+ E YTSL + G +   L  ++KL GK I +
Sbjct: 2   VLYFIGLGLYDERDITVKGLEIAKKCDYVFAEFYTSLXA-GTT---LGRIQKLIGKEIRV 57
Query: 61  ADREMVEEKADKI-LSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVM 119
             RE VE   + I L  ++E++VAFL  GDP  ATTH +L +RAK+ G++   +H  S+ 
Sbjct: 58  LSREDVELNFENIVLPLAKENDVAFLTPGDPLVATTHAELRIRAKRAGVESYVIHAPSIY 117
Query: 120 NAVGICGLQLYRFGETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLLDIRVKE 174
           +AVGI GL +Y+FG++ ++ +    W P S+Y+ IK N   GLHTL  LDI+ ++
Sbjct: 118 SAVGITGLHIYKFGKSATVAYPEGNWFPTSYYDVIKENAERGLHTLLFLDIKAEK 172

>pdb|2HUV|A Chain A, Crystal Structure Of Ph0725 From Pyrococcus Horikoshii Ot3 Length = 265

Iteration: 1
 Score =  154 bits (390), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 80/175 (45%), Positives = 114/175 (65%), Gaps = 5/175 (2%)
Query: 1   MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYGKPIAL 60
           +LY IGLGL DERDIT++GLE  KKCD V+ E YTSL++       L  ++KL GK I +
Sbjct: 2   VLYFIGLGLYDERDITVKGLEIAKKCDYVFAEFYTSLMA----GTTLGRIQKLIGKEIRV 57
Query: 61  ADREMVEEKADKI-LSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVM 119
             RE VE   + I L  ++E++VAFL  GDP  ATTH +L +R K+ G++   +H  S+ 
Sbjct: 58  LSREDVELNFENIVLPLAKENDVAFLTPGDPLVATTHAELRIRMKRAGVESYVIHAPSIY 117
Query: 120 NAVGICGLQLYRFGETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLLDIRVKE 174
           +AVGI GL +Y+FG++ ++ +    W P S+Y+ IK N   GLHTL  LDI+ ++
Sbjct: 118 SAVGITGLHIYKFGKSATVAYPEGNWFPTSYYDVIKENAERGLHTLLFLDIKAEK 172

>pdb|2ED5|A Chain A, Mutant S147m Structure Of Ph0725 From Pyrococcus Horikoshii Ot3 Length = 265

Iteration: 1
 Score =  154 bits (390), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 80/175 (45%), Positives = 114/175 (65%), Gaps = 5/175 (2%)
Query: 1   MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYGKPIAL 60
           +LY IGLGL DERDIT++GLE  KKCD V+ E YTSL++       L  ++KL GK I +
Sbjct: 2   VLYFIGLGLYDERDITVKGLEIAKKCDYVFAEFYTSLMA----GTTLGRIQKLIGKEIRV 57
Query: 61  ADREMVEEKADKI-LSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVM 119
             RE VE   + I L  ++E++VAFL  GDP  ATTH +L +RAK+ G++   +H  S+ 
Sbjct: 58  LSREDVELNFENIVLPLAKENDVAFLTPGDPLVATTHAELRIRAKRAGVESYVIHAPSIY 117
Query: 120 NAVGICGLQLYRFGETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLLDIRVKE 174
           +AVGI GL +Y+FG++ ++ +    W P  +Y+ IK N   GLHTL  LDI+ ++
Sbjct: 118 SAVGITGLHIYKFGKSATVAYPEGNWFPTMYYDVIKENAERGLHTLLFLDIKAEK 172

>pdb|2E8R|A Chain A, Structural Study Of Project Id Ph0725 From Pyrococcus Horikoshii Ot3 Length = 265

Iteration: 1
 Score =  154 bits (389), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 80/175 (45%), Positives = 114/175 (65%), Gaps = 5/175 (2%)
Query: 1   MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYGKPIAL 60
           +LY IGLGL DERDIT++GLE   KCD V+ E YTSL++       L  ++KL GK I +
Sbjct: 2   VLYFIGLGLYDERDITVKGLEIAMKCDYVFAEFYTSLMA----GTTLGRIQKLIGKEIRV 57
Query: 61  ADREMVEEKADKI-LSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVM 119
             RE VE   + I L  ++E++VAFL  GDP  ATTH +L +RAK+ G++   +H  S+ 
Sbjct: 58  LSREDVELNFENIVLPLAKENDVAFLTPGDPLVATTHAELRIRAKRAGVESYVIHAPSIY 117
Query: 120 NAVGICGLQLYRFGETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLLDIRVKE 174
           +AVGI GL +Y+FG++ ++ +    W P S+Y+ IK N   GLHTL  LDI+ ++
Sbjct: 118 SAVGITGLHIYKFGKSATVAYPEGNWFPTSYYDVIKENAERGLHTLLFLDIKAEK 172

>pdb|2EMU|A Chain A, Mutant L21h Structure Of Ph0725 From Pyrococcus Horikoshii Ot3 Length = 265

Iteration: 1
 Score =  154 bits (389), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 80/175 (45%), Positives = 114/175 (65%), Gaps = 5/175 (2%)
Query: 1   MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYGKPIAL 60
           +LY IGLGL DERDIT++G E  KKCD V+ E YTSL++       L  ++KL GK I +
Sbjct: 2   VLYFIGLGLYDERDITVKGHEIAKKCDYVFAEFYTSLMA----GTTLGRIQKLIGKEIRV 57
Query: 61  ADREMVEEKADKI-LSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVM 119
             RE VE   + I L  ++E++VAFL  GDP  ATTH +L +RAK+ G++   +H  S+ 
Sbjct: 58  LSREDVELNFENIVLPLAKENDVAFLTPGDPLVATTHAELRIRAKRAGVESYVIHAPSIY 117
Query: 120 NAVGICGLQLYRFGETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLLDIRVKE 174
           +AVGI GL +Y+FG++ ++ +    W P S+Y+ IK N   GLHTL  LDI+ ++
Sbjct: 118 SAVGITGLHIYKFGKSATVAYPEGNWFPTSYYDVIKENAERGLHTLLFLDIKAEK 172

>pdb|2DSH|A Chain A, Crystal Structure Of Lys26 To Tyr Mutant Of Diphthine Synthase Length = 265

Iteration: 1
 Score =  154 bits (389), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 80/175 (45%), Positives = 114/175 (65%), Gaps = 5/175 (2%)
Query: 1   MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYGKPIAL 60
           +LY IGLGL DERDIT++GLE  K CD V+ E YTSL++       L  ++KL GK I +
Sbjct: 2   VLYFIGLGLYDERDITVKGLEIAKYCDYVFAEFYTSLMA----GTTLGRIQKLIGKEIRV 57
Query: 61  ADREMVEEKADKI-LSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVM 119
             RE VE   + I L  ++E++VAFL  GDP  ATTH +L +RAK+ G++   +H  S+ 
Sbjct: 58  LSREDVELNFENIVLPLAKENDVAFLTPGDPLVATTHAELRIRAKRAGVESYVIHAPSIY 117
Query: 120 NAVGICGLQLYRFGETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLLDIRVKE 174
           +AVGI GL +Y+FG++ ++ +    W P S+Y+ IK N   GLHTL  LDI+ ++
Sbjct: 118 SAVGITGLHIYKFGKSATVAYPEGNWFPTSYYDVIKENAERGLHTLLFLDIKAEK 172

>pdb|2P6D|A Chain A, Crystal Structure Of Ph0725 From Pyrococcus Horikoshii Ot3 Length = 265

Iteration: 1
 Score =  154 bits (388), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 80/175 (45%), Positives = 114/175 (65%), Gaps = 5/175 (2%)
Query: 1   MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYGKPIAL 60
           +LY IGLGL DERDIT++GL   KKCD V+ E YTSL++       L  ++KL GK I +
Sbjct: 2   VLYFIGLGLYDERDITVKGLMIAKKCDYVFAEFYTSLMA----GTTLGRIQKLIGKEIRV 57
Query: 61  ADREMVEEKADKI-LSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVM 119
             RE VE   + I L  ++E++VAFL  GDP  ATTH +L +RAK+ G++   +H  S+ 
Sbjct: 58  LSREDVELNFENIVLPLAKENDVAFLTPGDPLVATTHAELRIRAKRAGVESYVIHAPSIY 117
Query: 120 NAVGICGLQLYRFGETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLLDIRVKE 174
           +AVGI GL +Y+FG++ ++ +    W P S+Y+ IK N   GLHTL  LDI+ ++
Sbjct: 118 SAVGITGLHIYKFGKSATVAYPEGNWFPTSYYDVIKENAERGLHTLLFLDIKAEK 172

>pdb|2P2X|A Chain A, Crystal Structure Of Ph0725 From Pyrococcus Horikoshii Ot3 Length = 265

Iteration: 1
 Score =  153 bits (387), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 80/175 (45%), Positives = 114/175 (65%), Gaps = 5/175 (2%)
Query: 1   MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYGKPIAL 60
           +LY IGLGL DERDIT++GLE  KKCD V+ E YTSL++       L  ++KL GK I +
Sbjct: 2   VLYFIGLGLYDERDITVKGLEIAKKCDYVFAEFYTSLMA----GTTLGRIQKLIGKEIRV 57
Query: 61  ADREMVEEKADKI-LSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVM 119
             RE VE   + I L  ++E++VAFL  GDP  ATTH +L +RAK+ G++   +H  S+ 
Sbjct: 58  LSREDVELNFENIVLPLAKENDVAFLTPGDPLVATTHAELRIRAKRAGVESYVIHAPSIY 117
Query: 120 NAVGICGLQLYRFGETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLLDIRVKE 174
           +AVGI GL + +FG++ ++ +    W P S+Y+ IK N   GLHTL  LDI+ ++
Sbjct: 118 SAVGITGLHIMKFGKSATVAYPEGNWFPTSYYDVIKENAERGLHTLLFLDIKAEK 172

>pdb|2OWF|A Chain A, Crystal Structure Of Ph0725 From Pyrococcus Horikoshii Ot3 Length = 265

Iteration: 1
 Score =  151 bits (382), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 80/175 (45%), Positives = 114/175 (65%), Gaps = 5/175 (2%)
Query: 1   MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYGKPIAL 60
           +LY IGLGL DERDIT++GLE  KKCD V+ E YTSL++       L  ++KL GK I +
Sbjct: 2   VLYFIGLGLYDERDITVKGLEIAKKCDYVFAEFYTSLMA----GTTLGRIQKLIGKEIRV 57
Query: 61  ADREMVEEKADKI-LSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVM 119
             RE VE   + I L  ++E++VAFL  GDP  ATTH +L +RAK+ G++   +H  S+ 
Sbjct: 58  LSREDVELNFENIVLPLAKENDVAFLTPGDPLVATTHAELRIRAKRAGVESYVIHAPSIY 117
Query: 120 NAVGICGLQLYRFGETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLLDIRVKE 174
           +AVGI GL +Y+FG++ ++ +      P S+Y+ IK N   GLHTL  LDI+ ++
Sbjct: 118 SAVGITGLHIYKFGKSATVAYPEGNMFPTSYYDVIKENAERGLHTLLFLDIKAEK 172

>pdb|1VHV|A Chain A, Crystal Structure Of Diphthine Synthase Length = 268

Iteration: 1
 Score =  115 bits (289), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 65/173 (37%), Positives = 108/173 (62%), Gaps = 12/173 (6%)
Query: 1   MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYGKPIAL 60
           +L  +GLGL D +DI+++GLEAV++ D+VY+E YTS L   LS+  +   E+ +GK +  
Sbjct: 14  LLTFVGLGLWDVKDISVKGLEAVREADEVYVEYYTSKL---LSS--IEEXEEFFGKRVVE 68
Query: 61  ADREMVEEKADKILSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMN 120
            +R  +EE + +++  ++  +V  LV GDP  ATTH+ + + A++ G++ + +H AS+  
Sbjct: 69  LERSDLEENSFRLIERAKSKSVVLLVPGDPXVATTHSAIKLEAERKGVKTRIIHGASIST 128
Query: 121 AV-GICGLQLYRFGETVSIPFFTETW-RPGSFYEKIKRNRSLGLHTLCLLDIR 171
           AV G+ GL  YRFG++ ++     +W R  +    IK NRS+  HTL  LD+ 
Sbjct: 129 AVCGLTGLHNYRFGKSATV-----SWHRSQTPVNVIKANRSIDAHTLLFLDLH 176

>pdb|1WDE|A Chain A, Crystal Structure Of The Conserved Hypothetical Protein Ape0931 From Aeropyrum Pernix K1 Length = 294

Iteration: 1
 Score = 87.0 bits (214), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 59/159 (37%), Positives = 84/159 (52%), Gaps = 10/159 (6%)
Query: 16  TLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYGKPIALADREMVEEKADKILS 75
           TL  L+AV++ D VY+E+YT   S  L     S +E      +  A R  +EE++ +I+S
Sbjct: 23  TLEALDAVRRADVVYVESYTXPGSSWLYK---SVVEAAGEARVVEASRRDLEERSREIVS 79
Query: 76  ESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNAS-VMNAVGICGLQLYRFGE 134
            + ++ VA +  GDP  ATTH+ L   A + G+ V+ +   S V  A G   L  YRFG 
Sbjct: 80  RALDAVVAVVTAGDPXVATTHSSLAAEALEAGVAVRYIPGVSGVQAARGATXLSFYRFGG 139
Query: 135 TVSIPFFTETWR---PGSFYEKIKRNRSLGLHTLCLLDI 170
           TV++P     WR   P S   +I  N   GLHT  LLD+
Sbjct: 140 TVTLPG---PWRGVTPISVARRIYLNLCAGLHTTALLDV 175

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	228
3i4t_A	292	Diphthine synthase; niaid, ssgcid, infectious dise	6e-77
2z6r_A	265	Diphthine synthase; methyltransferase, S-adenosyl-	5e-68
1wde_A	294	Probable diphthine synthase; structural genomics,	3e-65
1vhv_A	268	Diphthine synthase; structural genomics, transfera	7e-63
2qbu_A	232	Precorrin-2 methyltransferase; HET: SAH; 2.10A {Me	1e-06
2bb3_A	221	Cobalamin biosynthesis precorrin-6Y methylase (CB;	2e-06
2npn_A	251	Putative cobalamin synthesis related protein; COBF	2e-06
3nd1_A	275	Precorrin-6A synthase/COBF protein; methyltransfer	1e-05
2e0n_A	259	Precorrin-2 C20-methyltransferase; cobalt-factor I	2e-05
3nut_A	251	Precorrin-3 methylase; vitamin B12 pathway, cobala	3e-04
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	5e-04
1qzv_F	154	Plant photosystem I: subunit PSAF; photosynthesis,	6e-04

>3i4t_A Diphthine synthase; niaid, ssgcid, infectious disease, anaerobic parasitic protozoan, structural genomics, decode, UW, SBRI; 2.49A {Entamoeba histolytica} Length = 292

 Score =  232 bits (593), Expect = 6e-77
 Identities = 124/222 (55%), Positives = 166/222 (74%), Gaps = 5/222 (2%)

Query: 1   MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYGKPIAL 60
           MLYIIGLGL DE+DIT+RGLEAVK CD V++E YT++L        ++ LE+ YGK + +
Sbjct: 22  MLYIIGLGLYDEKDITVRGLEAVKSCDLVFLEHYTAILQ-----CDVAKLEEFYGKKVII 76

Query: 61  ADREMVEEKADKILSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMN 120
            DR++VE +AD+IL  ++  NVA LVVGD +GATTH+D+ VR +K+GI+VK +HNAS+MN
Sbjct: 77  GDRDLVETEADQILEPAKTKNVALLVVGDVYGATTHSDIFVRCQKMGIEVKVIHNASIMN 136

Query: 121 AVGICGLQLYRFGETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLLDIRVKEPSLESL 180
           A+G  GLQLYRFG+TVS+ F++E WRP S+Y KIK NR   +HTL LLDI+VKE S ES+
Sbjct: 137 AIGCSGLQLYRFGQTVSVCFWSEHWRPSSYYPKIKINRDNNMHTLVLLDIKVKERSEESI 196

Query: 181 CRGKKLYEPPRYMTVNIAIEQLLEVELLQGESGKAHELKIIL 222
            +G+ ++EPPRYMT+N  IEQLLEVE  Q       +  ++ 
Sbjct: 197 IKGRDIFEPPRYMTINQCIEQLLEVEKEQHLGVYDEDTMVVG 238

>2z6r_A Diphthine synthase; methyltransferase, S-adenosyl-L-methionine, transferase; HET: SAH MES; 1.50A {Pyrococcus horikoshii} PDB: 2dek_A* 1wng_A* 1vce_A* 2ed3_A* 2e4r_A* 2owg_A* 2ek3_A* 2pcm_A* 2p5c_A* 2hut_A* 2emr_A* 2el3_A* 2el0_A* 2ejk_A* 2eld_A* 2el2_A* 2eka_A* 2eh5_A* 2pcg_A* 2el1_A* ... Length = 265

 Score =  209 bits (532), Expect = 5e-68
 Identities = 91/223 (40%), Positives = 132/223 (59%), Gaps = 20/223 (8%)

Query: 1   MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYGKPIAL 60
           +LY IGLGL DERDIT++GLE  KKCD V+ E YTSL++       L  +++L GK I +
Sbjct: 2   VLYFIGLGLYDERDITVKGLEIAKKCDYVFAEFYTSLMAG----TTLGRIQRLIGKEIRV 57

Query: 61  ADREMVEEKADKI-LSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVM 119
             RE VE   + I L  ++E++VAFL  GDP  ATTH +L +RAK+ G++   +H  S+ 
Sbjct: 58  LSREDVELNFENIVLPLAKENDVAFLTPGDPLVATTHAELRIRAKRAGVESYVIHAPSIY 117

Query: 120 NAVGICGLQLYRFGETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLLDIRVKEPSLES 179
           +AVGI GL +Y+FG++ ++ +    W P S+Y+ IK N   GLHTL  LDI+        
Sbjct: 118 SAVGITGLHIYKFGKSATVAYPEGNWFPTSYYDVIKENAERGLHTLLFLDIKA------- 170

Query: 180 LCRGKKLYEPPRYMTVNIAIEQLLEVELLQGESGKAHELKIIL 222
                   E   YMT N A+E LL+VE ++       +  +++
Sbjct: 171 --------EKRMYMTANEAMELLLKVEDMKKGGVFTDDTLVVV 205

>1wde_A Probable diphthine synthase; structural genomics, conserved hypothetical protein, riken S genomics/proteomics initiative, RSGI, transferase; 2.00A {Aeropyrum pernix} SCOP: c.90.1.1 Length = 294

 Score =  203 bits (516), Expect = 3e-65
 Identities = 63/218 (28%), Positives = 95/218 (43%), Gaps = 21/218 (9%)

Query: 1   MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYGKPIAL 60
            L ++G G       TL  L+AV++ D VY+E+YT   S  L       +E      +  
Sbjct: 9   TLLLVGWGYAPG-MQTLEALDAVRRADVVYVESYTMPGSSWLYKS---VVEAAGEARVVE 64

Query: 61  ADREMVEEKADKILSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNAS-VM 119
           A R  +EE++ +I+S + ++ VA +  GDP  ATTH+ L   A + G+ V+ +   S V 
Sbjct: 65  ASRRDLEERSREIVSRALDAVVAVVTAGDPMVATTHSSLAAEALEAGVAVRYIPGVSGVQ 124

Query: 120 NAVGICGLQLYRFGETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLLDIRVKEPSLES 179
            A G   L  YRFG TV++P       P S   +I  N   GLHT  LLD+  +      
Sbjct: 125 AARGATMLSFYRFGGTVTLPGPWRGVTPISVARRIYLNLCAGLHTTALLDVDER------ 178

Query: 180 LCRGKKLYEPPRYMTVNIAIEQLLEVELLQGESGKAHE 217
                        ++    +  LLE +        A  
Sbjct: 179 ----------GVQLSPGQGVSLLLEADREYAREAGAPA 206

>1vhv_A Diphthine synthase; structural genomics, transferase; HET: MSE; 1.75A {Archaeoglobus fulgidus} SCOP: c.90.1.1 Length = 268

 Score =  196 bits (499), Expect = 7e-63
 Identities = 68/207 (32%), Positives = 115/207 (55%), Gaps = 28/207 (13%)

Query: 1   MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYGKPIAL 60
           +L  +GLGL D +DI+++GLEAV++ D+VY+E YTS L        +  +E+ +GK +  
Sbjct: 14  LLTFVGLGLWDVKDISVKGLEAVREADEVYVEYYTSKL-----LSSIEEMEEFFGKRVVE 68

Query: 61  ADREMVEEKADKILSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMN 120
            +R  +EE + +++  ++  +V  LV GDP  ATTH+ + + A++ G++ + +H AS+  
Sbjct: 69  LERSDLEENSFRLIERAKSKSVVLLVPGDPMVATTHSAIKLEAERKGVKTRIIHGASIST 128

Query: 121 AV-GICGLQLYRFGETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLLDIRVKEPSLES 179
           AV G+ GL  YRFG++ ++ +     R  +    IK NRS+  HTL  LD+         
Sbjct: 129 AVCGLTGLHNYRFGKSATVSW----HRSQTPVNVIKANRSIDAHTLLFLDLH-------- 176

Query: 180 LCRGKKLYEPPRYMTVNIAIEQLLEVE 206
                     P  MT+  A+E L+  +
Sbjct: 177 ----------PEPMTIGHAVENLIAED 193

>2qbu_A Precorrin-2 methyltransferase; HET: SAH; 2.10A {Methanothermobacter thermautotrophicusorganism_taxid} Length = 232

 Score = 46.9 bits (112), Expect = 1e-06
 Identities = 27/126 (21%), Positives = 52/126 (41%), Gaps = 16/126 (12%)

Query: 2   LYIIGLGLGDERDITLRGLEAVKKCDKV-YIEAYTSLLSFGLSTDGLSTLEKLYGKPIAL 60
           L  +G+G GD   +TLR +  ++    +    + +   S  LS       E+  G  I  
Sbjct: 5   LIGVGVGPGDSELLTLRAVNVLRSVPVICAPRSSSERESIALSIVEDILTERRDGCRILD 64

Query: 61  ADREMV----------EEKADKILSESQE-SNVAFLVVGDP--FGATTHTDLVVRAKKLG 107
               M           +  A  + +E ++  +VAF+ +GDP  +   ++  L  R + +G
Sbjct: 65  PVFPMTDDRDELESHWDSAARMVAAELEDGRDVAFITLGDPSIYSTFSY--LQQRIEDMG 122

Query: 108 IQVKAV 113
            + + V
Sbjct: 123 FKTEMV 128

>2bb3_A Cobalamin biosynthesis precorrin-6Y methylase (CB; beta, alpha-beta-alpha sandwich, structural genomics, PSI, P structure initiative; HET: SAH; 2.27A {Archaeoglobus fulgidus} SCOP: c.90.1.1 Length = 221

 Score = 46.3 bits (110), Expect = 2e-06
 Identities = 18/91 (19%), Positives = 33/91 (36%), Gaps = 13/91 (14%)

Query: 1   MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYGKPIAL 60
           M++I+G G       T R  E +++ + +Y       L              +      +
Sbjct: 23  MIWIVGSGTCRG-QTTERAKEIIERAEVIY--GSRRALEL---------AGVVDDSRARI 70

Query: 61  ADREMVEEKADKILSESQESNVAFLVVGDPF 91
                 +E   +I+ E +E  VA +  GDP 
Sbjct: 71  LRSFKGDE-IRRIMEEGREREVAVISTGDPM 100

>2npn_A Putative cobalamin synthesis related protein; COBF, PSI-2, MAD, struc genomics, SAM, S-adenosylmethionine, MCSG; HET: MSE SAM; 1.60A {Corynebacterium diphtheriae} Length = 251

 Score = 46.0 bits (109), Expect = 2e-06
 Identities = 26/135 (19%), Positives = 50/135 (37%), Gaps = 23/135 (17%)

Query: 2   LYIIGLGLGDERDITLRGLEAVKKCDKVYI----EAYTSLLS---------------FGL 42
           +Y+IG+G G    +TL+ +  ++    +      E  + LL+               + +
Sbjct: 5   IYVIGIGTGSPEFLTLQAISGLRHAQAIVALDKGEQKSDLLALRQKIVDTHAPGTPIYAV 64

Query: 43  STDGLSTLEKLYGKPIALADREMVEEKADKILSESQE-SNVAFLVVGDP--FGATTH-TD 98
           +          Y + +     E     A  I   + +   VAFLV GDP  + +T    +
Sbjct: 65  TDPERDRNPDNYEEEVRRWHAERAHLLASTIRERTPDDGAVAFLVWGDPSLYDSTLRIIE 124

Query: 99  LVVRAKKLGIQVKAV 113
            +   + L   VK +
Sbjct: 125 HMRNLEDLHADVKVI 139

>3nd1_A Precorrin-6A synthase/COBF protein; methyltransferase, deacetylase, transferase; HET: SAH; 1.50A {Rhodobacter capsulatus} Length = 275

 Score = 44.3 bits (104), Expect = 1e-05
 Identities = 28/137 (20%), Positives = 52/137 (37%), Gaps = 26/137 (18%)

Query: 2   LYIIGLGLGDERDITLRGLEAVKKCDKVYI----EAYTSLLSFG-------LSTDGLSTL 50
           L +IG+G G+ R IT + ++A+   D + I       + L           L+      +
Sbjct: 24  LSLIGIGTGNPRHITGQAVDAMNAADLILIPLKGADKSDLAGLRRQICAAHLTNPATKVI 83

Query: 51  E----------KLYGKPIALADREMVEEKADKILSE--SQESNVAFLVVGDP--FGATTH 96
           +            Y K +      + E    +I +     E  VA LV GDP  + +T  
Sbjct: 84  DFALPVRDASNPSYRKGVDDWHDAIAETWLSEITAHVPGLEGRVALLVWGDPSLYDSTLR 143

Query: 97  TDLVVRAKKLGIQVKAV 113
               +++ +L +  K +
Sbjct: 144 IAERLKS-RLPLTTKVI 159

>2e0n_A Precorrin-2 C20-methyltransferase; cobalt-factor II, tetrapyrrole, S-adenosylmethi transferase; HET: SAH; 2.00A {Chlorobaculum tepidum} PDB: 2e0k_A* Length = 259

 Score = 43.5 bits (103), Expect = 2e-05
 Identities = 21/102 (20%), Positives = 35/102 (34%), Gaps = 12/102 (11%)

Query: 2   LYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLST------DGLSTLEKLYG 55
           +  + LG GD   IT++ L  +++ D +Y     S      S       +      KL G
Sbjct: 7   IISVSLGPGDPGLITVKALSQLREADVIYYPGTVSASGAVTSVALDILKEFDLDPSKLRG 66

Query: 56  KPIALADREMV-----EEKADKILSESQE-SNVAFLVVGDPF 91
             + ++                +  E Q    VA + VGD  
Sbjct: 67  MLVPMSRSRGAAEASYAANYASMAEEVQAGRRVAVVSVGDGG 108

>3nut_A Precorrin-3 methylase; vitamin B12 pathway, cobalamin, methyltransferase, transfera; HET: SAH; 2.22A {Rhodobacter capsulatus} Length = 251

 Score = 40.0 bits (94), Expect = 3e-04
 Identities = 17/91 (18%), Positives = 32/91 (35%), Gaps = 12/91 (13%)

Query: 2  LYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYGKPIALA 61
          + + GLG G E  +T     A+ +   +    Y   ++          +    G  +   
Sbjct: 11 VTVAGLGPGREDLVTPEVTAALAEATDIV--GYIPYVAR---------IAPREGLTLHPT 59

Query: 62 DREMVEEKADKILSESQE-SNVAFLVVGDPF 91
          D  +  ++A   L  + E   V  +  GDP 
Sbjct: 60 DNRVELDRATHALEMAAEGRRVVVVSSGDPG 90

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 39.8 bits (92), Expect = 5e-04
 Identities = 29/197 (14%), Positives = 62/197 (31%), Gaps = 47/197 (23%)

Query: 32  EAYTSLLSFGLSTD-GLSTLEKLYGKPIALADREMVEEKADKILSESQESNVAFLVVGDP 90
           + +  L  F  S       L  ++         ++++     ++++  + +   LV   P
Sbjct: 373 KMFDRLSVFPPSAHIPTILLSLIWF--------DVIKSDVMVVVNKLHKYS---LVEKQP 421

Query: 91  FGATT--HTDLVVRAKKLGIQVKAVHNASVMNAVGICGLQLYRFGETVSIPFFTETWRPG 148
             +T      + +  K       A+H  S+++         Y   +T         +   
Sbjct: 422 KESTISIP-SIYLELKVKLENEYALHR-SIVDH--------YNIPKTFDSDDLIPPYLDQ 471

Query: 149 SFY-------EKIKRNRSLGLHTLCLLDIR-----VKEPSLESLCRGK--------KLYE 188
            FY       + I+    + L  +  LD R     ++  S      G         K Y+
Sbjct: 472 YFYSHIGHHLKNIEHPERMTLFRMVFLDFRFLEQKIRHDSTAWNASGSILNTLQQLKFYK 531

Query: 189 PPRYMTVNIAI-EQLLE 204
              Y+  N    E+L+ 
Sbjct: 532 --PYICDNDPKYERLVN 546

>1qzv_F Plant photosystem I: subunit PSAF; photosynthesis,plant photosynthetic reaction center, peripheral antenna; HET: CL1 PQN; 4.44A {Pisum sativum} SCOP: i.5.1.1 Length = 154

 Score = 38.4 bits (88), Expect = 6e-04
 Identities = 9/33 (27%), Positives = 15/33 (45%), Gaps = 11/33 (33%)

Query: 172 VKEPSLE-SLCRGKKLYEP---PRYMTVNIAIE 200
           +K+  L+ SL    KLY     P  + +   +E
Sbjct: 22  LKK--LQASL----KLYADDSAPA-LAIKATME 47

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	228
3i4t_A	292	Diphthine synthase; niaid, ssgcid, infectious dise	100.0
2z6r_A	265	Diphthine synthase; methyltransferase, S-adenosyl-	100.0
1wde_A	294	Probable diphthine synthase; structural genomics,	100.0
1vhv_A	268	Diphthine synthase; structural genomics, transfera	100.0
2ybo_A	294	Methyltransferase; SUMT, NIRE, heme D1 biosynthesi	99.97
1s4d_A	280	Uroporphyrin-III C-methyltransferase; tetrapyrrole	99.97
3ndc_A	264	Precorrin-4 C(11)-methyltransferase; SAH; HET: SAH	99.97
1cbf_A	285	Cobalt-precorrin-4 transmethylase; precorrin-4 met	99.97
4e16_A	253	Precorrin-4 C(11)-methyltransferase; structural ge	99.97
1ve2_A	235	Uroporphyrin-III C-methyltransferase; heme, biosyn	99.97
1va0_A	239	Uroporphyrin-III C-methyltransferase; structural g	99.97
2qbu_A	232	Precorrin-2 methyltransferase; HET: SAH; 2.10A {Me	99.96
2e0n_A	259	Precorrin-2 C20-methyltransferase; cobalt-factor I	99.96
1wyz_A	242	Putative S-adenosylmethionine-dependent methyltra;	99.96
1pjq_A	457	CYSG, siroheme synthase; rossman fold, nucleotide	99.95
3kwp_A	296	Predicted methyltransferase; putative methyltransf	99.95
2zvb_A	295	Precorrin-3 C17-methyltransferase; plasmid, struct	99.95
3nut_A	251	Precorrin-3 methylase; vitamin B12 pathway, cobala	99.95
2npn_A	251	Putative cobalamin synthesis related protein; COBF	99.94
3nd1_A	275	Precorrin-6A synthase/COBF protein; methyltransfer	99.92
2bb3_A	221	Cobalamin biosynthesis precorrin-6Y methylase (CB;	99.91
3hh1_A	117	Tetrapyrrole methylase family protein; chlorobium	99.9
3ffy_A	115	Putative tetrapyrrole (corrin/porphyrin) methylas;	97.0

>3i4t_A Diphthine synthase; niaid, ssgcid, infectious disease, anaerobic parasitic protozoan, structural genomics, decode, UW, SBRI; 2.49A {Entamoeba histolytica}

Probab=100.00  E-value=6.1e-45  Score=318.66  Aligned_cols=221  Identities=56%  Similarity=0.925  Sum_probs=177.0

Q ss_pred             CEEEEecCCCCcchhhHHHHHHHHhCCEEEEeCcccccccCCCcchhhHHhhHhCCCeeecChhhHHHHHHHHHHHcCCC
Q 027097            1 MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYGKPIALADREMVEEKADKILSESQES   80 (228)
Q Consensus         1 ml~iVG~GpG~~~~lT~~A~~~L~~aDvV~~~~~~s~l~~~~~~~~~~~l~~~~~~~i~~~~~~~~e~~~~~i~~~a~~~   80 (228)
                      |||+||+||||+++||+||+++|++||+|+|+++++.. . .+.+   .++.+.++++...++..+++..+.+++.++++
T Consensus        22 ~l~lVG~GpGd~~~LT~rA~~~L~~ADvV~~e~~~s~~-~-~~~~---~L~~~~~~~~i~~~~~~~~~~~~~i~~~a~~~   96 (292)
T 3i4t_A           22 MLYIIGLGLYDEKDITVRGLEAVKSCDLVFLEHYTAIL-Q-CDVA---KLEEFYGKKVIIGDRDLVETEADQILEPAKTK   96 (292)
T ss_dssp             EEEEEECBSSSGGGSCHHHHHHHHHCSEEEECGGGGGS-S-SCHH---HHHHHHTSCCEEC-------CCCTTHHHHTTS
T ss_pred             EEEEEEECCCChHHhhHHHHHHHHhCCEEEEecccccc-c-CCHH---HHHhCCCCeEEEcccccHHHHHHHHHHHhcCC
Confidence            69999999999999999999999999999999886543 1 2344   56555566665555555666666777887779


Q ss_pred             cEEEEecCCCCCcccHHHHHHHHHhCCCcEEEECCCCHHhHHHHhCCccccCCceeEEecccCCCCCCChHHHHHHHhhc
Q 027097           81 NVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNAVGICGLQLYRFGETVSIPFFTETWRPGSFYEKIKRNRSL  160 (228)
Q Consensus        81 ~Va~l~~GDP~~~~~~~~l~~~~~~~gi~v~viPGiSs~~a~a~~Gl~l~~~~~~~~v~~~~~~~~p~~~~~~i~~~~~~  160 (228)
                      +||+|++|||++|+++.++++++.+.|++++|||||||++|+|++|+||++|+.+.++.|.+.|++|.++++.+++++..
T Consensus        97 ~Vv~L~~GDP~i~g~g~~l~~~l~~~gi~veviPGiSs~~A~a~~G~pl~~~~~~~sv~~~t~~~~p~~~~~~~~~~l~~  176 (292)
T 3i4t_A           97 NVALLVVGDVYGATTHSDIFVRCQKMGIEVKVIHNASIMNAIGCSGLQLYRFGQTVSVCFWSEHWRPSSYYPKIKINRDN  176 (292)
T ss_dssp             EEEEEESBCHHHHCTTHHHHHHHHHHTCCEEEECCCCHHHHGGGGSCCGGGBCCCEEECCCBTTBCCCTHHHHHHHHHHT
T ss_pred             CEEEEecCCCCccccHHHHHHHHHHCCCcEEEECCHHHHHHHHHhCCCcccCCceeEEEEEeCCCCCCccHHHHHHHhhc
Confidence            99999999999999999999999999999999999999998888999999999999999999999998889999999999


Q ss_pred             CCCeEEEEecccCCchhHHhhccccccCCCCccCHHHHHHHHHHHHHHhCCCCCCCCcEEEE-Eecc
Q 027097          161 GLHTLCLLDIRVKEPSLESLCRGKKLYEPPRYMTVNIAIEQLLEVELLQGESGKAHELKIIL-KQLQ  226 (228)
Q Consensus       161 g~~tlvlld~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~ll~~~~~~~~~~~~~~~~~v~-~~~~  226 (228)
                      +.+|+||+|++.+|+++++++|+++.|+|+|||++.+++++|++++++...+.+++++++++ .+++
T Consensus       177 ~~~Tlvl~d~~~~e~~~~~~~~~~~~y~p~r~m~~~~~~~~L~~~~~~l~~~g~~~dtpv~vv~~~t  243 (292)
T 3i4t_A          177 NMHTLVLLDIKVKERSEESIIKGRDIFEPPRYMTINQCIEQLLEVEKEQHLGVYDEDTMVVGMARVA  243 (292)
T ss_dssp             TCBEEEEECEECCC-------------CCCEECCHHHHHHHHHHHHHHHCCCSCCTTCEEEEEESTT
T ss_pred             CCCeEEEEeccccccchhhccccccccCCccccCHHHHHHHHHHHHHHHHhcCCCCCCEEEEEeecC
Confidence            99999999999999999999999999999999999999999999998877778887776666 4443

>2z6r_A Diphthine synthase; methyltransferase, S-adenosyl-L-methionine, transferase; HET: SAH MES; 1.50A {Pyrococcus horikoshii} PDB: 2dek_A* 1wng_A* 1vce_A* 2ed3_A* 2e4r_A* 2owg_A* 2ek3_A* 2pcm_A* 2p5c_A* 2hut_A* 2emr_A* 2el3_A* 2el0_A* 2ejk_A* 2eld_A* 2el2_A* 2eka_A* 2eh5_A* 2pcg_A* 2el1_A* ...

Probab=100.00  E-value=4.1e-38  Score=271.57  Aligned_cols=207  Identities=43%  Similarity=0.726  Sum_probs=172.9

Q ss_pred             CEEEEecCCCCcchhhHHHHHHHHhCCEEEEeCcccccccCCCcchhhHHhhHhCCCeeecChhhHHHHHHHHH-HHcCC
Q 027097            1 MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYGKPIALADREMVEEKADKIL-SESQE   79 (228)
Q Consensus         1 ml~iVG~GpG~~~~lT~~A~~~L~~aDvV~~~~~~s~l~~~~~~~~~~~l~~~~~~~i~~~~~~~~e~~~~~i~-~~a~~   79 (228)
                      |||+||+|||||++||+||+++|++||+|++++|.+.+ .+.+.+   .++.+.++++...++..+++..+.++ +.+++
T Consensus         2 ~l~iVG~GpG~~~~LT~~A~~~L~~advv~~~~~~~~l-~~~~~~---~l~~~~~~~~~~~~~~~~~~~~~~i~~~~~~g   77 (265)
T 2z6r_A            2 VLYFIGLGLYDERDITVKGLEIAKKCDYVFAEFYTSLM-AGTTLG---RIQRLIGKEIRVLSREDVELNFENIVLPLAKE   77 (265)
T ss_dssp             CEEEEECBSSSGGGSBHHHHHHHHHCSEEEEECSSCCC-TTCCHH---HHHHHHTSCCEEECHHHHHHHHHHHTHHHHTT
T ss_pred             EEEEEccCCCChHhcCHHHHHHHHhCCEEEEecccccc-ccCCHH---HHHhccCCcEEEcCcccHHHHHHHHHHHHhCC
Confidence            69999999999999999999999999999999886433 001233   56555566665555566777778887 77777


Q ss_pred             CcEEEEecCCCCCcccHHHHHHHHHhCCCcEEEECCCCHHhHHHHhCCccccCCceeEEecccCCCCCCChHHHHHHHhh
Q 027097           80 SNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNAVGICGLQLYRFGETVSIPFFTETWRPGSFYEKIKRNRS  159 (228)
Q Consensus        80 ~~Va~l~~GDP~~~~~~~~l~~~~~~~gi~v~viPGiSs~~a~a~~Gl~l~~~~~~~~v~~~~~~~~p~~~~~~i~~~~~  159 (228)
                      ++||+|++|||++|+++.++++.+.++|++++|||||||++++|++|+||++++.++++++.+.|++|.+.++.+..++.
T Consensus        78 ~~V~~l~~GDP~i~~~~~~l~~~l~~~gi~veviPGiSs~~aaa~~g~pl~~~~~~~~v~~~s~~~~~~~~~~~l~~~~~  157 (265)
T 2z6r_A           78 NDVAFLTPGDPLVATTHAELRIRAKRAGVESYVIHAPSIYSAVGITGLHIYKFGKSATVAYPEGNWFPTSYYDVIKENAE  157 (265)
T ss_dssp             SCEEEEESBCTTSSSSTHHHHHHHHHTTCCEEEECCCCHHHHGGGGTCCGGGBCCCEEECCCBTTBCCCHHHHHHHHHHH
T ss_pred             CcEEEEECCCCcCCCCHHHHHHHHHHCCCcEEEECChhHHHHHHHhCCCccCCCccEEEEEecCCcCCCchHHHHHHHHh
Confidence            89999999999999999999999999999999999999999667799999999999999999999998766788888888


Q ss_pred             cCCCeEEEEecccCCchhHHhhccccccCCCCccCHHHHHHHHHHHHHHhCCCCCCCCcEEEE-Eecc
Q 027097          160 LGLHTLCLLDIRVKEPSLESLCRGKKLYEPPRYMTVNIAIEQLLEVELLQGESGKAHELKIIL-KQLQ  226 (228)
Q Consensus       160 ~g~~tlvlld~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~ll~~~~~~~~~~~~~~~~~v~-~~~~  226 (228)
                      .+.+|++++|++.++               +|||++.+..+.|.++.++...+++++++.+++ .+++
T Consensus       158 ~~~~tlvl~d~~~~~---------------~~y~~~~~~~~~l~~~~~~l~~~~~~~~~~v~v~~~l~  210 (265)
T 2z6r_A          158 RGLHTLLFLDIKAEK---------------RMYMTANEAMELLLKVEDMKKGGVFTDDTLVVVLARAG  210 (265)
T ss_dssp             TTCBEEEEECEEGGG---------------TEECCHHHHHHHHHHHHHHHCCSSSCTTCEEEEEESTT
T ss_pred             CCCceEEEEeccccc---------------ccccCHHHHHHHHHHHHHHHhhcCCCCCCEEEEEEeCC
Confidence            888999999999654               789999999999988888877767776765554 5554

>1wde_A Probable diphthine synthase; structural genomics, conserved hypothetical protein, riken S genomics/proteomics initiative, RSGI, transferase; 2.00A {Aeropyrum pernix} SCOP: c.90.1.1

Probab=100.00  E-value=6.5e-35  Score=255.43  Aligned_cols=205  Identities=30%  Similarity=0.372  Sum_probs=162.1

Q ss_pred             CEEEEecCCCCcchhhHHHHHHHHhCCEEEEeCcccccccCCCcchhhHHhhHh-CCCeeecChhhHHHHHHHHHHHcCC
Q 027097            1 MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLY-GKPIALADREMVEEKADKILSESQE   79 (228)
Q Consensus         1 ml~iVG~GpG~~~~lT~~A~~~L~~aDvV~~~~~~s~l~~~~~~~~~~~l~~~~-~~~i~~~~~~~~e~~~~~i~~~a~~   79 (228)
                      |||+||+| |||++||++|+++|++||+|+++.++..    -...+++.+..+. .+++...+++..++..+.+++.++.
T Consensus         9 ~l~lVG~G-Gd~~lLTl~A~~~L~~ADvV~~~~~~~~----~~s~~~~~~~~~~~~~~~~~~~~~~~e~~~~~i~~~~~g   83 (294)
T 1wde_A            9 TLLLVGWG-YAPGMQTLEALDAVRRADVVYVESYTMP----GSSWLYKSVVEAAGEARVVEASRRDLEERSREIVSRALD   83 (294)
T ss_dssp             EEEEEECB-SSTTCCCHHHHHHHHHCSEEEEECSSST----TCHHHHHHHHHHHTSSSEEECCHHHHHTSHHHHTCCSSC
T ss_pred             EEEEEECC-CChHHhhHHHHHHHHhCCEEEEeccccc----ccccchHHHHHhccCCeEEecChHHHHHHHHHHHHHhCC
Confidence            59999999 9999999999999999999999977510    0011111233333 2455555556666677778777666


Q ss_pred             CcEEEEecCCCCCcccHHHHHHHHHhCCCcEEEECCCCHHhHH-HHhCCccccCCceeEEecccCCCCCCChHHHHHHHh
Q 027097           80 SNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNAV-GICGLQLYRFGETVSIPFFTETWRPGSFYEKIKRNR  158 (228)
Q Consensus        80 ~~Va~l~~GDP~~~~~~~~l~~~~~~~gi~v~viPGiSs~~a~-a~~Gl~l~~~~~~~~v~~~~~~~~p~~~~~~i~~~~  158 (228)
                      ++||+|++|||++|+++.++++.+.++|++++|||||||++++ |++|+||+++++++++.|.+.|+.|.+.++.+.+++
T Consensus        84 ~~Vv~L~~GDP~v~g~~~~l~~~l~~~gi~veviPGiSs~~aa~a~~Gipl~~~~~~~~v~~~~~~~~p~~~~~~l~~~l  163 (294)
T 1wde_A           84 AVVAVVTAGDPMVATTHSSLAAEALEAGVAVRYIPGVSGVQAARGATMLSFYRFGGTVTLPGPWRGVTPISVARRIYLNL  163 (294)
T ss_dssp             CEEEEEESBCTTSSSSHHHHHHHHHHTTCEEEEECCCCHHHHHHHHHTCCGGGEEEEEEECCGGGCCCCHHHHHHHHHHH
T ss_pred             CCEEEEeCCCCccccCHHHHHHHHHHCCCCEEEECCHhHHHHHHHHhCCCccCCCceEEEEeccCcccCCChHHHHHHHH
Confidence            8999999999999999999999999999999999999999975 689999999999999999888887766788888889


Q ss_pred             hcCCCeEEEEecccCCchhHHhhccccccCCCCccCHHHHHHHHHHHHHH----hCC-CCCCCCcEE-EEEecc
Q 027097          159 SLGLHTLCLLDIRVKEPSLESLCRGKKLYEPPRYMTVNIAIEQLLEVELL----QGE-SGKAHELKI-ILKQLQ  226 (228)
Q Consensus       159 ~~g~~tlvlld~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~ll~~~~~----~~~-~~~~~~~~~-v~~~~~  226 (228)
                      ..+.+|+||++....                +|||++++++++|+++++.    .++ |..++++.+ |+.+++
T Consensus       164 ~~~~~tlvl~~~~~~----------------~~~m~~~~i~~~L~~l~~~l~~~~~~~G~~~~~~~v~v~~~lg  221 (294)
T 1wde_A          164 CAGLHTTALLDVDER----------------GVQLSPGQGVSLLLEADREYAREAGAPALLARLPSVLVEAGAG  221 (294)
T ss_dssp             HHTCEEEEEECBCTT----------------SCBCCHHHHHHHHHHHHHHHHHHHTSCCCGGGSCEEEEECCGG
T ss_pred             hcCCCeEEEEecccc----------------cccccHHHHHHHHHHHHHhhhccccccCcCCCCCEEEEEEeCC
Confidence            888899999987632                6899999999999987665    344 344555544 445554

>1vhv_A Diphthine synthase; structural genomics, transferase; HET: MSE; 1.75A {Archaeoglobus fulgidus} SCOP: c.90.1.1

Probab=100.00  E-value=6.3e-34  Score=246.01  Aligned_cols=180  Identities=38%  Similarity=0.686  Sum_probs=146.9

Q ss_pred             CEEEEecCCCCcchhhHHHHHHHHhCCEEEEeCcccccccCCCcchhhHHhhHhCCCeeecChhhHHHHHHHHHHHcCCC
Q 027097            1 MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYGKPIALADREMVEEKADKILSESQES   80 (228)
Q Consensus         1 ml~iVG~GpG~~~~lT~~A~~~L~~aDvV~~~~~~s~l~~~~~~~~~~~l~~~~~~~i~~~~~~~~e~~~~~i~~~a~~~   80 (228)
                      +||+||+|||||++||+||+++|++||+|+++.+.+.+ .+ ..   +.++.+++++....++..+++..+.+++.++++
T Consensus        14 ~l~vVG~GpGd~~lLTlrA~~~L~~ADvI~~~~~~~~l-~~-~~---~~~~~~~~~~~~~~~~~~~~~~~~~i~~~a~~~   88 (268)
T 1vhv_A           14 LLTFVGLGLWDVKDISVKGLEAVREADEVYVEYYTSKL-LS-SI---EEMEEFFGKRVVELERSDLEENSFRLIERAKSK   88 (268)
T ss_dssp             EEEEEECBSSSGGGSBHHHHHHHHHCSEEEEECSSCCC-SS-CH---HHHHHHHTSCCEEECHHHHTTTHHHHHHHHTTS
T ss_pred             EEEEEECCCCCHHHHHHHHHHHHhcCCEEEECCchHhh-hc-cH---HHHHHHhCCCccccchhHHHHHHHHHHHHhCCC
Confidence            58999999999999999999999999999999876544 11 12   255555565544433455666777888887779


Q ss_pred             cEEEEecCCCCCcccHHHHHHHHHhCCCcEEEECCCCHHhHH-HHhCCccccCCceeEEecccCCCCCCChHHHHHHHhh
Q 027097           81 NVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNAV-GICGLQLYRFGETVSIPFFTETWRPGSFYEKIKRNRS  159 (228)
Q Consensus        81 ~Va~l~~GDP~~~~~~~~l~~~~~~~gi~v~viPGiSs~~a~-a~~Gl~l~~~~~~~~v~~~~~~~~p~~~~~~i~~~~~  159 (228)
                      +||+|++|||++|+++.++++++++.|++++|||||||++++ |++|+||++|+..+++.+    +.|.++++.+.+++.
T Consensus        89 ~Va~L~~GDP~iy~~~~~l~~~~~~~gi~vevIPGiSs~~aa~a~~G~pl~~~~~~~sv~~----~~~~~~~~~~~~~l~  164 (268)
T 1vhv_A           89 SVVLLVPGDPMVATTHSAIKLEAERKGVKTRIIHGASISTAVCGLTGLHNYRFGKSATVSW----HRSQTPVNVIKANRS  164 (268)
T ss_dssp             EEEEEESBCTTSSSHHHHHHHHHHHTTCCEEEECCCCHHHHHHHHHCCCGGGBCCCEEECS----SCCSHHHHHHHHHHH
T ss_pred             CEEEEeCCCCcccCcHHHHHHHHHHCCCcEEEECCccHHHHHHHHcCCCcccCcceEEEEe----cCCCchHHHHHHHhc
Confidence            999999999999999999999999999999999999999975 689999999998888865    334445677777888


Q ss_pred             cCCCeEEEEecccCCchhHHhhccccccCCCCccCHHHHHHHHHHHHH
Q 027097          160 LGLHTLCLLDIRVKEPSLESLCRGKKLYEPPRYMTVNIAIEQLLEVEL  207 (228)
Q Consensus       160 ~g~~tlvlld~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~ll~~~~  207 (228)
                      ...+|++++|.+                  +.+|++.++.+.|+++.+
T Consensus       165 ~~~~tlvl~d~~------------------~~~~~~~~~~~~L~~l~~  194 (268)
T 1vhv_A          165 IDAHTLLFLDLH------------------PEPMTIGHAVENLIAEDA  194 (268)
T ss_dssp             TTCBEEEEECCS------------------SSCCCHHHHHHHHHHHCG
T ss_pred             cCCCeEEEEcCc------------------hhhcCHHHHHHHHHHHHh
Confidence            888999999985                  237999999999988654

>2ybo_A Methyltransferase; SUMT, NIRE, heme D1 biosynthesis; HET: SAH; 2.00A {Pseudomonas aeruginosa} PDB: 2ybq_A*

Probab=99.97  E-value=4.1e-30  Score=225.02  Aligned_cols=161  Identities=17%  Similarity=0.178  Sum_probs=122.8

Q ss_pred             CEEEEecCCCCcchhhHHHHHHHHhCCEEEEeCcccccccCCCcchhhHHhhHh-CCCeeec------ChhhHHHHHHHH
Q 027097            1 MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLY-GKPIALA------DREMVEEKADKI   73 (228)
Q Consensus         1 ml~iVG~GpG~~~~lT~~A~~~L~~aDvV~~~~~~s~l~~~~~~~~~~~l~~~~-~~~i~~~------~~~~~e~~~~~i   73 (228)
                      |||+||+|||||++||+||+++|++||+|+++.+.+       .+   .++.+. +.+....      ....++++.+.+
T Consensus        26 ~l~lVG~GpGdp~lLTlrA~~~L~~ADvV~~d~~~~-------~~---il~~~~~~~~~i~~~k~~~~~~~~~~~i~~~l   95 (294)
T 2ybo_A           26 SVALVGAGPGDPGLLTLRAWALLQQAEVVVYDRLVA-------RE---LIALLPESCQRIYVGKRCGHHSLPQEEINELL   95 (294)
T ss_dssp             CEEEEEEESSCGGGSCHHHHHHHTTCSEEEECTTSC-------HH---HHHHSCTTSEEEECC--------CHHHHHHHH
T ss_pred             EEEEEecCCCCHHHHHHHHHHHHHcCCEEEEcCCCC-------HH---HHHhcccCCeEEecccccccccCCHHHHHHHH
Confidence            699999999999999999999999999999965422       33   333221 1222111      122366777788


Q ss_pred             HHHcCC-CcEEEEecCCCCCcccHHHHHHHHHhCCCcEEEECCCCHHhHH-HHhCCccccCCceeEEecccCCCCCCChH
Q 027097           74 LSESQE-SNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNAV-GICGLQLYRFGETVSIPFFTETWRPGSFY  151 (228)
Q Consensus        74 ~~~a~~-~~Va~l~~GDP~~~~~~~~l~~~~~~~gi~v~viPGiSs~~a~-a~~Gl~l~~~~~~~~v~~~~~~~~p~~~~  151 (228)
                      ++.+++ ++|++|++|||++|+++.++++.+.+.|++++|||||||++++ |++|+||++++.+.++.+.+.|.++.+..
T Consensus        96 ~~~~~~G~~Vv~L~~GDP~i~g~g~~l~~~l~~~gi~vevIPGiSS~~aa~a~~Giplt~~~~~~~~~~~sg~~~~~~~~  175 (294)
T 2ybo_A           96 VRLARQQRRVVRLKGGDPFIFGRGAEELERLLEAGVDCQVVPGVTAASGCSTYAGIPLTHRDLAQSCTFVTGHLQNDGRL  175 (294)
T ss_dssp             HHHHHTTCCEEEEEEBCTTSSSSHHHHHHHHHHTTCCEEEECCCCHHHHHHHHTTCCSCBTTTBSCEEEEECSCCTTSSC
T ss_pred             HHHHHCCCeEEEEcCCCCCccCCHHHHHHHHHHCCCCEEEECCHHHHHHHHHHcCCCcccCCCCcEEEEEcccCCcccch
Confidence            888876 8999999999999999999999999999999999999999975 68999999998777777777777643211


Q ss_pred             HHHHHHhhcCCCeEEEEecc
Q 027097          152 EKIKRNRSLGLHTLCLLDIR  171 (228)
Q Consensus       152 ~~i~~~~~~g~~tlvlld~~  171 (228)
                      +..++.+..+.+|+||++..
T Consensus       176 ~~~~~~l~~~~~tlVl~~~~  195 (294)
T 2ybo_A          176 DLDWAGLARGKQTLVFYMGL  195 (294)
T ss_dssp             CCCHHHHTSSSCEEEEESCG
T ss_pred             hhHHHHHhcCCCeEEEECcH
Confidence            12245666778999998865

>1s4d_A Uroporphyrin-III C-methyltransferase; tetrapyrrole biosynthesis, cobalamin, SAM, SAH, uroporphyrin methyltransferase; HET: SAH; 2.70A {Pseudomonas denitrificans} SCOP: c.90.1.1

Probab=99.97  E-value=5.5e-30  Score=222.71  Aligned_cols=162  Identities=15%  Similarity=0.184  Sum_probs=121.9

Q ss_pred             CEEEEecCCCCcchhhHHHHHHHHhCCEEEEeCcccccccCCCcchhhHHhhH-hCCCeeecC------hhhHHHHHHHH
Q 027097            1 MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKL-YGKPIALAD------REMVEEKADKI   73 (228)
Q Consensus         1 ml~iVG~GpG~~~~lT~~A~~~L~~aDvV~~~~~~s~l~~~~~~~~~~~l~~~-~~~~i~~~~------~~~~e~~~~~i   73 (228)
                      |||+||+|||||++||+||+++|++||+|+++.+.+       .+   .++.+ .++++....      ...++++.+.+
T Consensus        16 ~l~lVG~GpGd~~lLTl~A~~~L~~ADvV~~d~~~~-------~~---ll~~~~~~~~~~~~~k~~~~~~~~~~~i~~~l   85 (280)
T 1s4d_A           16 SVWLVGAGPGDPGLLTLHAANALRQADVIVHDALVN-------ED---CLKLARPGAVLEFAGKRGGKPSPKQRDISLRL   85 (280)
T ss_dssp             CEEEEECBSSCTTSSBHHHHHHHHHCSEEEECSCSC-------TT---GGGGSSTTCCEEECSCCC--CCCCHHHHHHHH
T ss_pred             EEEEEecCCCCHHHHHHHHHHHHHhCCEEEEcCCCC-------HH---HHHhccCCCEEEeccccccccccCHHHHHHHH
Confidence            699999999999999999999999999999975432       23   23222 123333211      23467777888


Q ss_pred             HHHcCC-CcEEEEecCCCCCcccHHHHHHHHHhCCCcEEEECCCCHHhHH-HHhCCccccCCceeEEecccCCCCCCCh-
Q 027097           74 LSESQE-SNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNAV-GICGLQLYRFGETVSIPFFTETWRPGSF-  150 (228)
Q Consensus        74 ~~~a~~-~~Va~l~~GDP~~~~~~~~l~~~~~~~gi~v~viPGiSs~~a~-a~~Gl~l~~~~~~~~v~~~~~~~~p~~~-  150 (228)
                      ++.+++ ++|++|+.|||++|+++.++++.+.+.|++++|||||||++++ +++|+||++++.+.++.+.+.|.++... 
T Consensus        86 ~~~~~~G~~Vv~L~~GDP~i~g~g~~l~~~l~~~gi~veviPGiSs~~aa~a~~Gipl~~~~~~~~~~~~~~~~~~~~~~  165 (280)
T 1s4d_A           86 VELARAGNRVLRLKGGDPFVFGRGGEEALTLVEHQVPFRIVPGITAGIGGLAYAGIPVTHREVNHAVTFLTGHDSSGLVP  165 (280)
T ss_dssp             HHHHHTTCCEEEEESBCTTSSSSHHHHHHHHHTTTCCEEEECCCCTTTHHHHHTTCCSCCTTTCSEEEEEECCC------
T ss_pred             HHHHhCCCeEEEEcCCCCccccCHHHHHHHHHHCCCCEEEEcCccHHHHHHHHcCCCccCCCcccEEEEECCcCCccccc
Confidence            888876 8999999999999999999999999999999999999999975 6899999988876666667777764210 


Q ss_pred             HHHHHHHhhcCCCeEEEEeccc
Q 027097          151 YEKIKRNRSLGLHTLCLLDIRV  172 (228)
Q Consensus       151 ~~~i~~~~~~g~~tlvlld~~~  172 (228)
                      ....++.+..+.+|+||++...
T Consensus       166 ~~~~~~~l~~~~~tlVl~~~~~  187 (280)
T 1s4d_A          166 DRINWQGIASGSPVIVMYMAMK  187 (280)
T ss_dssp             -CCCHHHHHTTCSEEEEESCST
T ss_pred             ccccHHHHhCCCCeEEEECchh
Confidence            0012344556779999998764

>3ndc_A Precorrin-4 C(11)-methyltransferase; SAH; HET: SAH; 2.00A {Rhodobacter capsulatus} PDB: 3nei_A

Probab=99.97  E-value=5.5e-30  Score=221.08  Aligned_cols=161  Identities=19%  Similarity=0.166  Sum_probs=122.1

Q ss_pred             CEEEEecCCCCcchhhHHHHHHHHhCCEEEEeCcccccccCCCcchhhHHhhHh-CCCeeecChhhHHHHHHHHHHHcCC
Q 027097            1 MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLY-GKPIALADREMVEEKADKILSESQE   79 (228)
Q Consensus         1 ml~iVG~GpG~~~~lT~~A~~~L~~aDvV~~~~~~s~l~~~~~~~~~~~l~~~~-~~~i~~~~~~~~e~~~~~i~~~a~~   79 (228)
                      |||+||+|||||++||+||+++|++||+|++++..      ++.+   .++.+. +++++......++++.+.+++.+++
T Consensus         5 ~l~iVG~GpG~~~lLT~~A~~~L~~AdvV~~~~~~------~~~~---ll~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~   75 (264)
T 3ndc_A            5 TVHFIGAGPGAADLITIRGRDLIASCPVCLYAGSL------VPEA---LLAHCPPGAKIVNTAPMSLDAIIDTIAEAHAA   75 (264)
T ss_dssp             CEEEEECBSSCGGGSBHHHHHHHHHCSEEEECSTT------SCGG---GGGGSCTTCEEEECTTSCHHHHHHHHHHHHHH
T ss_pred             EEEEEEcCCCChHHHHHHHHHHHHcCCEEEEECCC------CCHH---HHhhcCCCCEEEecCCCCHHHHHHHHHHHHHC
Confidence            69999999999999999999999999999985431      1223   333332 3444433334467788888888765


Q ss_pred             -CcEEEEecCCCCCcccHHHHHHHHHhCCCcEEEECCCCHHhHH-HHhCCccccCCceeEEecccCCCCCC--ChHHHHH
Q 027097           80 -SNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNAV-GICGLQLYRFGETVSIPFFTETWRPG--SFYEKIK  155 (228)
Q Consensus        80 -~~Va~l~~GDP~~~~~~~~l~~~~~~~gi~v~viPGiSs~~a~-a~~Gl~l~~~~~~~~v~~~~~~~~p~--~~~~~i~  155 (228)
                       ++||+|++|||++|+++.++++.+.+.|++++|+|||||++++ |++|+||++.+.+.++.+.+.|.+..  ...+.+ 
T Consensus        76 G~~Va~L~~GDP~iyg~~~~l~~~l~~~gi~veviPGiSs~~aaaA~lG~plt~~~~~~~~~~~s~~~~~~~~~~~~~l-  154 (264)
T 3ndc_A           76 GQDVARLHSGDLSIWSAMGEQLRRLRALNIPYDVTPGVPSFAAAAATLGAELTLPGVAQSVILTRTSGRASAMPAGETL-  154 (264)
T ss_dssp             TCCEEEEESBCTTSSCSHHHHHHHHHHTTCCEEEECCCCHHHHHHHHHTCCSCBTTTBCCEEEEECCTTTCCCCTTCCH-
T ss_pred             CCeEEEEeCCCCccccHHHHHHHHHHhCCCCEEEeCCHHHHHHHHHHhCCCccCCCceeEEEEEeccCCCCCcchHHHH-
Confidence             8999999999999999999999999999999999999999975 67999999888777777777676531  111223 


Q ss_pred             HHhhcCCCeEEEEecc
Q 027097          156 RNRSLGLHTLCLLDIR  171 (228)
Q Consensus       156 ~~~~~g~~tlvlld~~  171 (228)
                      +.+.....|+++++..
T Consensus       155 ~~l~~~~~tlvl~~~~  170 (264)
T 3ndc_A          155 ENFARTGAVLAIHLSV  170 (264)
T ss_dssp             HHHHTTTCEEEEESCG
T ss_pred             HHHhcCCCcEEEecCH
Confidence            3444455788887753

>1cbf_A Cobalt-precorrin-4 transmethylase; precorrin-4 methyltransferase, cobalamin biosynth methyltransferase; HET: SAH; 2.40A {Bacillus megaterium} SCOP: c.90.1.1 PDB: 2cbf_A*

Probab=99.97  E-value=1.1e-29  Score=221.12  Aligned_cols=161  Identities=24%  Similarity=0.271  Sum_probs=124.7

Q ss_pred             CEEEEecCCCCcchhhHHHHHHHHhCCEEEEeCcccccccCCCcchhhHHhhHh-CCCeeecChhhHHHHHHHHHHHcCC
Q 027097            1 MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLY-GKPIALADREMVEEKADKILSESQE   79 (228)
Q Consensus         1 ml~iVG~GpG~~~~lT~~A~~~L~~aDvV~~~~~~s~l~~~~~~~~~~~l~~~~-~~~i~~~~~~~~e~~~~~i~~~a~~   79 (228)
                      |||+||+|||||++||++|+++|++||+|++++..      .+.+   .++.+. ++++.......+++..+.+++.+++
T Consensus        22 ~l~lVG~GpGd~~~LT~~A~~~L~~AdvV~~~~~~------~~~~---ll~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~   92 (285)
T 1cbf_A           22 KLYIIGAGPGDPDLITVKGLKLLQQADVVLYADSL------VSQD---LIAKSKPGAEVLKTAGMHLEEMVGTMLDRMRE   92 (285)
T ss_dssp             EEEEEECBSSCGGGSCHHHHHHHHHCSEEEECTTT------SCHH---HHTTSCTTCEEEECTTCCHHHHHHHHHHHHTT
T ss_pred             EEEEEecCCCCHHHHHHHHHHHHHhCCEEEEeCCC------CCHH---HHHhcCCCCEEEecCCCCHHHHHHHHHHHHHC
Confidence            59999999999999999999999999999986531      1122   333222 3444433334567788888888876


Q ss_pred             -CcEEEEecCCCCCcccHHHHHHHHHhCCCcEEEECCCCHHhHH-HHhCCccccCCceeEEecccCCCC-CCChHHHHHH
Q 027097           80 -SNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNAV-GICGLQLYRFGETVSIPFFTETWR-PGSFYEKIKR  156 (228)
Q Consensus        80 -~~Va~l~~GDP~~~~~~~~l~~~~~~~gi~v~viPGiSs~~a~-a~~Gl~l~~~~~~~~v~~~~~~~~-p~~~~~~i~~  156 (228)
                       ++||+|++|||++|+++.++++.+.+.|++++|||||||++++ |++|+||+.++.+.++.+.+.|++ |....+. +.
T Consensus        93 g~~Vv~L~~GDP~i~g~~~~l~~~l~~~gi~veviPGiSS~~aa~a~~G~pl~~~~~~~~~~~~~~~g~~~~~~~~~-l~  171 (285)
T 1cbf_A           93 GKMVVRVHTGDPAMYGAIMEQMVLLKREGVDIEIVPGVTSVFAAAAAAEAELTIPDLTQTVILTRAEGRTPVPEFEK-LT  171 (285)
T ss_dssp             TCCEEEEESBCTTTTCCCHHHHHHHHHTTCEEEEECCCCHHHHHHHHTTCCSCBTTTBCCEEEEECCSSSCCCGGGC-HH
T ss_pred             CCeEEEEeCCCccccccHHHHHHHHHHCCCcEEEECCchHHHHHHHHcCCCcccCCcceeEEEeccCCCCCcchHHH-HH
Confidence             8999999999999999999999999999999999999999975 679999998887777777666665 2222222 34


Q ss_pred             HhhcCCCeEEEEecc
Q 027097          157 NRSLGLHTLCLLDIR  171 (228)
Q Consensus       157 ~~~~g~~tlvlld~~  171 (228)
                      ++..+.+|+++++..
T Consensus       172 ~l~~~~~tlvl~~~~  186 (285)
T 1cbf_A          172 DLAKHKCTIALFLSS  186 (285)
T ss_dssp             HHHTTCSEEEEESCT
T ss_pred             HHhcCCCeEEEECcH
Confidence            566677899998754

>4e16_A Precorrin-4 C(11)-methyltransferase; structural genomics, center for structural genomics of infec diseases, csgid; 2.49A {Clostridium difficile}

Probab=99.97  E-value=1.4e-29  Score=217.11  Aligned_cols=162  Identities=17%  Similarity=0.106  Sum_probs=119.9

Q ss_pred             CEEEEecCCCCcchhhHHHHHHHHhCCEEEEeCcccccccCCCcchhhHHhhHh-CCCeeecChhhHHHHHHHHHHHcCC
Q 027097            1 MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLY-GKPIALADREMVEEKADKILSESQE   79 (228)
Q Consensus         1 ml~iVG~GpG~~~~lT~~A~~~L~~aDvV~~~~~~s~l~~~~~~~~~~~l~~~~-~~~i~~~~~~~~e~~~~~i~~~a~~   79 (228)
                      +||+||+||||+++||+||+++|++||+|+++++.      ...+   .++.+. ++++.......++++.+.+.+.+++
T Consensus         6 ~l~iVG~GpG~~~~lT~~A~~~L~~advv~~~~~~------~~~~---~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~   76 (253)
T 4e16_A            6 KVHFVGAGPGDKELITLKGYKLLSNADVVIYAGSL------VNPE---LLEYCKEDCQIHNSAHMDLQEIIDVMREGIEN   76 (253)
T ss_dssp             CEEEEECBSSCGGGSCHHHHHHHHHCSEEEECTTT------SCGG---GGGGSCTTCEEEEGGGCCHHHHHHHHHHHHHT
T ss_pred             eEEEEeCCCCCHHHHHHHHHHHHHhCCEEEEeCCC------CCHH---HHhhcCCCCEEEecCCCCHHHHHHHHHHHHHC
Confidence            59999999999999999999999999999996531      1122   232221 2333332233467778888888766


Q ss_pred             -CcEEEEecCCCCCcccHHHHHHHHHhCCCcEEEECCCCHHhHH-HHhCCccccCCceeEEecccCCCCCCChHHHHHHH
Q 027097           80 -SNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNAV-GICGLQLYRFGETVSIPFFTETWRPGSFYEKIKRN  157 (228)
Q Consensus        80 -~~Va~l~~GDP~~~~~~~~l~~~~~~~gi~v~viPGiSs~~a~-a~~Gl~l~~~~~~~~v~~~~~~~~p~~~~~~i~~~  157 (228)
                       ++|++|++|||++|+++.++++.+.+.|+++++||||||++++ |++|+||++.+.+.++.+.+.|+++.......++.
T Consensus        77 g~~V~~l~~GDP~i~~~~~~l~~~l~~~gi~veviPGiSS~~aa~a~~G~plt~~~~~~~~~~~~~~g~~~~~~~~~~~~  156 (253)
T 4e16_A           77 NKSVVRLQTGDFSIYGSIREQVEDLNKLNIDYDCTPGVSSFLGAASSLGVEYTVPEISQSVIITRMEGRTPVPEKESIQS  156 (253)
T ss_dssp             TCCEEEEESBCTTTTCCHHHHHHHHHHHTCCEEEECCCCHHHHHHHHHTCCSCBTTTBSCEEEEEC---CCCCGGGSHHH
T ss_pred             CCcEEEEeCCCCccccCHHHHHHHHHHCCCCEEEECCHHHHHHHHHHhCCCcccCCccceEEEEeccCCCCcchHHHHHH
Confidence             8999999999999999999999999999999999999999975 67999998877666666666666532111122345


Q ss_pred             hhcCCCeEEEEecc
Q 027097          158 RSLGLHTLCLLDIR  171 (228)
Q Consensus       158 ~~~g~~tlvlld~~  171 (228)
                      +.....|+++++..
T Consensus       157 l~~~~~t~vl~~~~  170 (253)
T 4e16_A          157 YAKHQTSMVIFLSV  170 (253)
T ss_dssp             HHTTCSEEEEEECS
T ss_pred             HhcCCCeEEEECcH
Confidence            66677899998753

>1ve2_A Uroporphyrin-III C-methyltransferase; heme, biosynthesis, structural genomics, NPPSFA; 1.80A {Thermus thermophilus} SCOP: c.90.1.1

Probab=99.97  E-value=8.5e-30  Score=215.85  Aligned_cols=151  Identities=21%  Similarity=0.253  Sum_probs=117.2

Q ss_pred             CEEEEecCCCCcchhhHHHHHHHHhCCEEEEeCcccccccCCCcchhhHHhhHhCCCeeecC------hhhHHHHHHHHH
Q 027097            1 MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYGKPIALAD------REMVEEKADKIL   74 (228)
Q Consensus         1 ml~iVG~GpG~~~~lT~~A~~~L~~aDvV~~~~~~s~l~~~~~~~~~~~l~~~~~~~i~~~~------~~~~e~~~~~i~   74 (228)
                      |||+||+|||||++||+||+++|++||+|+++.+.+       .+   .++.+ ++++....      ...+++..+.++
T Consensus         4 ~l~vVG~GpG~~~~LT~~A~~~L~~advv~~~~~~~-------~~---~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~i~   72 (235)
T 1ve2_A            4 KVYLVGAGFGGPEHLTLKALRVLEVAEVVLHDRLVH-------PG---VLALA-KGELVPVGKEGYGGKTPQEAITARLI   72 (235)
T ss_dssp             EEEEEECBSSSGGGSBHHHHHHHHHCSEEEECTTSC-------HH---HHTTC-CSEEEEC-------CCCHHHHHHHHH
T ss_pred             EEEEEeeCCCCHHHHHHHHHHHHHhCCEEEEeCCCC-------HH---HHHhh-CcEEEEecccCcccccCHHHHHHHHH
Confidence            499999999999999999999999999999865432       23   33322 33333211      123567777788


Q ss_pred             HHcCC-CcEEEEecCCCCCcccHHHHHHHHHhCCCcEEEECCCCHHhHH-HHhCCccccCCceeEEecccCCCCCCChHH
Q 027097           75 SESQE-SNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNAV-GICGLQLYRFGETVSIPFFTETWRPGSFYE  152 (228)
Q Consensus        75 ~~a~~-~~Va~l~~GDP~~~~~~~~l~~~~~~~gi~v~viPGiSs~~a~-a~~Gl~l~~~~~~~~v~~~~~~~~p~~~~~  152 (228)
                      +.+++ ++|++|++|||++|+++.++++.+.+.|+++++||||||++++ |++|+||++++.+.++.+.+.|. |..   
T Consensus        73 ~~~~~g~~V~~l~~GDP~i~~~~~~l~~~l~~~gi~v~viPGiSs~~aa~a~~g~pl~~~~~~~~~~~~s~~~-~~~---  148 (235)
T 1ve2_A           73 ALAREGRVVARLKGGDPMVFGRGGEEALALRRAGIPFEVVPGVTSAVGALSALGLPLTHRGLARSFAVATGHD-PAL---  148 (235)
T ss_dssp             HHHHTTCEEEEEESBCTTSSTTHHHHHHHHHHHTCCEEEECCCCTTHHHHHHTTCCSCBTTTBSCEEEEESSC-TTS---
T ss_pred             HHHHcCCeEEEEcCCCCCcccCHHHHHHHHHHCCCCEEEECCHhHHHHHHHHcCCCcccCCcccEEEEeCCCC-chh---
Confidence            88876 8999999999999999999999998889999999999999975 68999999988666666667776 532   


Q ss_pred             HHHHHhhcCCCeEEEEecc
Q 027097          153 KIKRNRSLGLHTLCLLDIR  171 (228)
Q Consensus       153 ~i~~~~~~g~~tlvlld~~  171 (228)
                          ++. +.+|+++++..
T Consensus       149 ----~l~-~~~t~vl~~~~  162 (235)
T 1ve2_A          149 ----PLP-RADTLVLLMPL  162 (235)
T ss_dssp             ----CCC-BCSEEEEEC--
T ss_pred             ----hhc-cCCeEEEEcCh
Confidence                445 66899998754

>1va0_A Uroporphyrin-III C-methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.97A {Thermus thermophilus} SCOP: c.90.1.1 PDB: 1v9a_A

Probab=99.97  E-value=7.8e-30  Score=216.57  Aligned_cols=154  Identities=21%  Similarity=0.196  Sum_probs=117.7

Q ss_pred             CEEEEecCCCCcchhhHHHHHHHHhCCEEEEeCcccccccCCCcchhhHHhhHhCCCeeecC-----hhhHHHHHHHHHH
Q 027097            1 MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYGKPIALAD-----REMVEEKADKILS   75 (228)
Q Consensus         1 ml~iVG~GpG~~~~lT~~A~~~L~~aDvV~~~~~~s~l~~~~~~~~~~~l~~~~~~~i~~~~-----~~~~e~~~~~i~~   75 (228)
                      |||+||+|||||++||+||+++|++||+|+++.+.+       .+   .++.+. ++....+     ...+++..+.+.+
T Consensus         2 ~l~iVG~GpG~~~~LT~~A~~~L~~advI~~~~~~~-------~~---~l~~~~-~~~i~~~~~~~~~~~~~~~~~~i~~   70 (239)
T 1va0_A            2 RVYLVGAGPGDPELLTLKAYRLLKEAPVVLYDRLVD-------ER---VLALAP-GEKVYVGKEEGESEKQEEIHRLLLR   70 (239)
T ss_dssp             EEEEEECBSSCGGGSBHHHHHHHHHCSEEEECTTSC-------HH---HHTTCC-SEEEECCCCC----CHHHHHHHHHH
T ss_pred             EEEEEecCCCCHHHHHHHHHHHHHhCCEEEEcCCCC-------HH---HHhhcc-ccEEecccccccccCHHHHHHHHHH
Confidence            699999999999999999999999999999965422       33   232211 2222111     2346777788888


Q ss_pred             HcCC-CcEEEEecCCCCCcccHHHHHHHHHhCCCcEEEECCCCHHhHHHHhCCccccCCceeEEecccCCCCCCChHHHH
Q 027097           76 ESQE-SNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNAVGICGLQLYRFGETVSIPFFTETWRPGSFYEKI  154 (228)
Q Consensus        76 ~a~~-~~Va~l~~GDP~~~~~~~~l~~~~~~~gi~v~viPGiSs~~a~a~~Gl~l~~~~~~~~v~~~~~~~~p~~~~~~i  154 (228)
                      .+++ ++|++|++|||++|+++.++++.+.+.|++++++|||||++++   |+||++++.+..+.+.+.|.++..  ...
T Consensus        71 ~~~~g~~V~~l~~GDP~i~~~~~~l~~~l~~~gi~v~viPGiSs~~aa---g~pl~~~~~~~~~~~~~~~~~~~~--~~~  145 (239)
T 1va0_A           71 HARAHPFVVRLKGGDPMVFGRGGEEVLFLLRHGVPVEVVPGVTSLLAS---GLPLTHRGLAHGFAAVSGVLEGGG--YPD  145 (239)
T ss_dssp             HHHTSSEEEEEESBCTTSSSSHHHHHHHHHHTTCCEEEECCCCGGGTT---CCCSSBTTTBSEEEEEESSCGGGC--CCC
T ss_pred             HHHCCCcEEEEeCCCCccccCHHHHHHHHHHCCCcEEEECCcchHhhc---CCCcccCCccceEEEEeccCCccc--hhh
Confidence            8876 8999999999999999999999999999999999999999987   999999886556666666665321  112


Q ss_pred             HHHhhcCCCeEEEEecc
Q 027097          155 KRNRSLGLHTLCLLDIR  171 (228)
Q Consensus       155 ~~~~~~g~~tlvlld~~  171 (228)
                      ++++..+ +|+++++..
T Consensus       146 ~~~l~~~-~t~vl~~~~  161 (239)
T 1va0_A          146 LRPFARV-PTLVVLMGV  161 (239)
T ss_dssp             CTTTTTC-SSEEEESCS
T ss_pred             HHHhcCC-CcEEEEccH
Confidence            3556667 999998865

>2qbu_A Precorrin-2 methyltransferase; HET: SAH; 2.10A {Methanothermobacter thermautotrophicusorganism_taxid}

Probab=99.96  E-value=3.1e-28  Score=205.35  Aligned_cols=158  Identities=21%  Similarity=0.268  Sum_probs=116.8

Q ss_pred             CEEEEecCCCCcchhhHHHHHHHHhCCEEEEeCcccccccCCCcchhhHHhhHh-----CCCeee-----c-C----hhh
Q 027097            1 MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLY-----GKPIAL-----A-D----REM   65 (228)
Q Consensus         1 ml~iVG~GpG~~~~lT~~A~~~L~~aDvV~~~~~~s~l~~~~~~~~~~~l~~~~-----~~~i~~-----~-~----~~~   65 (228)
                      |||+||+|||||++||+||+++|++||+|+++.+...-    ..-+.+.++.+.     ++++..     . +    ...
T Consensus         4 ~l~iVG~GpG~~~~lT~~A~~~L~~advv~~~~~~~~~----~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (232)
T 2qbu_A            4 KLIGVGVGPGDSELLTLRAVNVLRSVPVICAPRSSSER----ESIALSIVEDILTERRDGCRILDPVFPMTDDRDELESH   79 (232)
T ss_dssp             CEEEEECBSSCGGGSBHHHHHHHHHCSEEECCBCTTCS----SCHHHHHHHHHHHHCSSCCEEECCBCCSCSSSTTHHHH
T ss_pred             eEEEEEcCCCChHHHHHHHHHHHHhCCEEEEeCCCCCc----cchHHHHHHHHhccccCCcEEEEecCCCCccHHHHHHH
Confidence            59999999999999999999999999999987653100    000222443332     333321     1 1    124


Q ss_pred             HHHHHHHHHHHcCC-CcEEEEecCCCCCcccHHHHHHHHHhCCCcEEEECCCCHHhHH-HHhCCccccCCceeEEecccC
Q 027097           66 VEEKADKILSESQE-SNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNAV-GICGLQLYRFGETVSIPFFTE  143 (228)
Q Consensus        66 ~e~~~~~i~~~a~~-~~Va~l~~GDP~~~~~~~~l~~~~~~~gi~v~viPGiSs~~a~-a~~Gl~l~~~~~~~~v~~~~~  143 (228)
                      +++..+.+.+.+++ ++||+|++|||++|+++.++++.+.++|++++++|||||++++ |++|+|++.++..+++..   
T Consensus        80 ~~~~~~~i~~~~~~g~~V~~l~~GDP~i~~~~~~l~~~~~~~gi~v~viPGiSs~~aa~a~~g~pl~~~~~~~~~~~---  156 (232)
T 2qbu_A           80 WDSAARMVAAELEDGRDVAFITLGDPSIYSTFSYLQQRIEDMGFKTEMVPGVTSFTACAATAGRTLVEGDEILLVVP---  156 (232)
T ss_dssp             HHHHHHHHHHHHHTTCCEEEEESBCTTBSCSHHHHHHHHHHTTCCEEEECCCCHHHHHHHHTTCCCBCTTCCEEEES---
T ss_pred             HHHHHHHHHHHHHCCCeEEEEeCCCCccchhHHHHHHHHHHCCCcEEEeCCccHHHHHHHHhCCCCCCCCceEEEEe---
Confidence            67777888888876 8999999999999999999999999999999999999999975 689999988776666542   


Q ss_pred             CCCCCChHHHHHHHhhcCCCeEEEEecc
Q 027097          144 TWRPGSFYEKIKRNRSLGLHTLCLLDIR  171 (228)
Q Consensus       144 ~~~p~~~~~~i~~~~~~g~~tlvlld~~  171 (228)
                       .++.    .+...+..+ +|++|++..
T Consensus       157 -~~~~----~l~~~~~~~-~t~vl~~~~  178 (232)
T 2qbu_A          157 -RVDD----RFERVLRDV-DACVIMKTS  178 (232)
T ss_dssp             -SCCH----HHHHHGGGC-SEEEESSHH
T ss_pred             -CCHH----HHHHHhhcC-CeEEEEccc
Confidence             2221    344445444 799998654

>2e0n_A Precorrin-2 C20-methyltransferase; cobalt-factor II, tetrapyrrole, S-adenosylmethi transferase; HET: SAH; 2.00A {Chlorobaculum tepidum} PDB: 2e0k_A*

Probab=99.96  E-value=1.1e-28  Score=212.00  Aligned_cols=160  Identities=18%  Similarity=0.216  Sum_probs=116.6

Q ss_pred             CEEEEecCCCCcchhhHHHHHHHHhCCEEEEeCcccccccCCCcchhhHHhhHh------CCCee----ecCh------h
Q 027097            1 MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLY------GKPIA----LADR------E   64 (228)
Q Consensus         1 ml~iVG~GpG~~~~lT~~A~~~L~~aDvV~~~~~~s~l~~~~~~~~~~~l~~~~------~~~i~----~~~~------~   64 (228)
                      |||+||+|||||++||+||+++|++||+|+++.+...-     .++++.++.+.      ++++.    ...+      .
T Consensus         6 ~l~iVG~GpG~~~~LT~~A~~~L~~advV~~~~~~~~~-----~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (259)
T 2e0n_A            6 SIISVSLGPGDPGLITVKALSQLREADVIYYPGTVSAS-----GAVTSVALDILKEFDLDPSKLRGMLVPMSRSRGAAEA   80 (259)
T ss_dssp             EEEEEECBSSCGGGSBHHHHHHHHHCSEEEEEEEECTT-----CCEECHHHHHHTTTTCCGGGEEEEEEECC--------
T ss_pred             EEEEEEeCCCChHHHHHHHHHHHHhCCEEEEecccccc-----ccHHHHHHHHHHhcCCCCCEEEeeccCCccchhhhHH
Confidence            39999999999999999999999999999998543110     00112343322      22332    1111      1


Q ss_pred             hHHHHHHHHHHHcCC-CcEEEEecCCCCCcccHHHHHHHHHhCCCcEEEECCCCHHhHH-HHhCCccccCCceeEEeccc
Q 027097           65 MVEEKADKILSESQE-SNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNAV-GICGLQLYRFGETVSIPFFT  142 (228)
Q Consensus        65 ~~e~~~~~i~~~a~~-~~Va~l~~GDP~~~~~~~~l~~~~~~~gi~v~viPGiSs~~a~-a~~Gl~l~~~~~~~~v~~~~  142 (228)
                      .+++..+.|++.+++ ++||+|++|||++|+++.++++.+.+.|++++|||||||++++ |++|+||++++..+++..  
T Consensus        81 ~~~~~~~~i~~~~~~g~~Va~l~~GDP~~~~~~~~l~~~l~~~gi~v~viPGiSs~~aa~a~~G~pl~~~~~~~~~~~--  158 (259)
T 2e0n_A           81 SYAANYASMAEEVQAGRRVAVVSVGDGGFYSTASAIIERARRDGLDCSMTPGIPAFIAAGSAAGMPLALQSDSVLVLA--  158 (259)
T ss_dssp             -CGGGHHHHHHHHHTTCEEEEEESBCTTBSCTHHHHHHHHHTTTCCEEEECCCCHHHHHHHHTTCCSBCTTCCEEEEC--
T ss_pred             HHHHHHHHHHHHHHCCCeEEEEeCCCCcccccHHHHHHHHHHCCCCEEEeCChhHHHHHHHhcCCCCcCCCceEEEEc--
Confidence            145667788888776 8999999999999999999999999999999999999999965 689999998777777543  


Q ss_pred             CCCCCCChHHHHHHHhhcCCCeEEEEeccc
Q 027097          143 ETWRPGSFYEKIKRNRSLGLHTLCLLDIRV  172 (228)
Q Consensus       143 ~~~~p~~~~~~i~~~~~~g~~tlvlld~~~  172 (228)
                      .+. +   .+.+.+.+.. .+|+++++...
T Consensus       159 ~~~-~---~~~l~~~~~~-~~t~vl~~~~~  183 (259)
T 2e0n_A          159 QID-E---IGELERALVT-HSTVVVMKLST  183 (259)
T ss_dssp             SCS-S---THHHHHHHTT-CSEEEECCTTS
T ss_pred             CCC-C---HHHHHHHhhc-CCEEEEEcccc
Confidence            222 1   3455555554 47999987653

>1wyz_A Putative S-adenosylmethionine-dependent methyltra; northeast structural genomics consortium, BTR28, methyltrans PSI; 2.50A {Bacteroides thetaiotaomicron} SCOP: c.90.1.1

Probab=99.96  E-value=4.2e-28  Score=206.71  Aligned_cols=123  Identities=18%  Similarity=0.214  Sum_probs=90.5

Q ss_pred             CEEEEecCCCCcc---hhhHHHHHHHHhCCEEEEeCcccccccCCCcchhhHHhhH-hCCC-----eeecChhhHHHHHH
Q 027097            1 MLYIIGLGLGDER---DITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKL-YGKP-----IALADREMVEEKAD   71 (228)
Q Consensus         1 ml~iVG~GpG~~~---~lT~~A~~~L~~aDvV~~~~~~s~l~~~~~~~~~~~l~~~-~~~~-----i~~~~~~~~e~~~~   71 (228)
                      |||+||+|||||+   +||+||+++|++||+|+++++..      +.+   .++.+ .+++     +....+..+++..+
T Consensus         4 ~ly~VG~GpGd~~~~dLlTlrA~~~L~~aDvI~~~~~~~------~~~---ll~~~~~~~~~~~~~~~~~~~~~~~~~~~   74 (242)
T 1wyz_A            4 ALYLLPVTLGDTPLEQVLPSYNTEIIRGIRHFIVEDVRS------ARR---FLKKVDREIDIDSLTFYPLNKHTSPEDIS   74 (242)
T ss_dssp             SEEEECCCSSSSCHHHHSCTHHHHHHTTCCEEEESCHHH------HHH---HHHHHCSSSCTTCCCCEECCSSCCHHHHH
T ss_pred             eEEEEecCCCCCcccCccCHHHHHHHHhCCEEEEeCCcc------hHH---HHHhcCCCCceeeeeeecccccCHHHHHH
Confidence            5999999999998   69999999999999999876421      122   34333 1222     22223334456667


Q ss_pred             HHHHHcCC-CcEEEEe-cCCCCCcccHHHHHHHHHhCCCcEEEECCCCHHhHH-HHhCCccccC
Q 027097           72 KILSESQE-SNVAFLV-VGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNAV-GICGLQLYRF  132 (228)
Q Consensus        72 ~i~~~a~~-~~Va~l~-~GDP~~~~~~~~l~~~~~~~gi~v~viPGiSs~~a~-a~~Gl~l~~~  132 (228)
                      .+++.+++ ++||+|+ +|||++|+++.++++.+++.|++++|||||||++++ |++|+|+++|
T Consensus        75 ~i~~~~~~G~~Va~ls~~GdP~i~~~g~~l~~~l~~~gi~vevIPGiSs~~aa~a~~G~p~~~f  138 (242)
T 1wyz_A           75 GYLKPLAGGASMGVISEAGCPAVADPGADVVAIAQRQKLKVIPLVGPSSIILSVMASGFNGQSF  138 (242)
T ss_dssp             HHHHHHHTTCCEEEECC-------CHHHHHHHHHHHTTCCEEECCCCCHHHHHHHHHTSCSSSE
T ss_pred             HHHHHHHcCCEEEEEecCCCCcccCcHHHHHHHHHHCCCCEEEeCcHHHHHHHHHHcCCCCCeE
Confidence            88888877 8999997 899999999999999999999999999999999975 6799997754

>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*

Probab=99.95  E-value=3.2e-28  Score=224.71  Aligned_cols=159  Identities=22%  Similarity=0.244  Sum_probs=120.6

Q ss_pred             CEEEEecCCCCcchhhHHHHHHHHhCCEEEEeCcccccccCCCcchhhHHhhHh-CCCeeec------ChhhHHHHHHHH
Q 027097            1 MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLY-GKPIALA------DREMVEEKADKI   73 (228)
Q Consensus         1 ml~iVG~GpG~~~~lT~~A~~~L~~aDvV~~~~~~s~l~~~~~~~~~~~l~~~~-~~~i~~~------~~~~~e~~~~~i   73 (228)
                      |||+||+|||||++||++|+++|++||+|+++.+.+       .+   .++.+. +.+....      ....++++.+.+
T Consensus       217 ~l~lVG~GpGd~~lLTlrA~~~L~~ADvV~~d~~~~-------~~---il~~~~~~~~~~~~~k~~~~~~~~~~~i~~~l  286 (457)
T 1pjq_A          217 EVVLVGAGPGDAGLLTLKGLQQIQQADIVVYDRLVS-------DD---IMNLVRRDADRVFVGKRAGYHCVPQEEINQIL  286 (457)
T ss_dssp             EEEEEECBSSCGGGSBHHHHHHHHHCSEEEECTTSC-------HH---HHTTSCTTSEEEECSCC---CCCTTHHHHHHH
T ss_pred             EEEEEeCCCCChHHccHHHHHHHHhCCEEEEeCCCC-------HH---HHhhcccCCEEEeccccccccCCCHHHHHHHH
Confidence            589999999999999999999999999999975432       23   232211 1222211      112356777788


Q ss_pred             HHHcCC-CcEEEEecCCCCCcccHHHHHHHHHhCCCcEEEECCCCHHhHH-HHhCCccccCCceeEEecccCCCCCCChH
Q 027097           74 LSESQE-SNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNAV-GICGLQLYRFGETVSIPFFTETWRPGSFY  151 (228)
Q Consensus        74 ~~~a~~-~~Va~l~~GDP~~~~~~~~l~~~~~~~gi~v~viPGiSs~~a~-a~~Gl~l~~~~~~~~v~~~~~~~~p~~~~  151 (228)
                      ++.+++ ++|++|++|||++|+++.++++.+.+.|++++|+|||||++++ |++|+||++++.+.++.+.+.|+++..  
T Consensus       287 ~~~~~~G~~Vv~L~~GDP~i~g~g~~l~~~l~~~gi~v~vvPGiSs~~aa~a~~Giplt~~~~~~~~~~vsg~~~~~~--  364 (457)
T 1pjq_A          287 LREAQKGKRVVRLKGGDPFIFGRGGEELETLCHAGIPFSVVPGITAASGCSAYSGIPLTHRDYAQSVRLVTGHLKTGG--  364 (457)
T ss_dssp             HHHHHTTCEEEEEESBCTTTSSSHHHHHTTTTTTTCCEEEECCCCHHHHHHHHTTCCSCCTTTCSEEEEECC--------
T ss_pred             HHHHHCCCcEEEEeCCCCCccCCHHHHHHHHHHCCCCEEEeCCHhHHHHHHHHcCCCccCCCccceEEEEeCCCCCcc--
Confidence            888876 8999999999999999999999999999999999999999975 679999999998788888888876421  


Q ss_pred             HHHHHHhhcCCCeEEEEecc
Q 027097          152 EKIKRNRSLGLHTLCLLDIR  171 (228)
Q Consensus       152 ~~i~~~~~~g~~tlvlld~~  171 (228)
                      ...++++..+.+|+||++..
T Consensus       365 ~~~~~~l~~~~~t~Vl~~~~  384 (457)
T 1pjq_A          365 ELDWENLAAEKQTLVFYMGL  384 (457)
T ss_dssp             CCCHHHHHSSSEEEEESSCS
T ss_pred             hhhHHHHhcCCCeEEEEcch
Confidence            11245666778999998765

>3kwp_A Predicted methyltransferase; putative methyltransferase, MCSG, STRU genomics, PSI-2, protein structure initiative; 2.29A {Lactobacillus brevis atcc 367}

Probab=99.95  E-value=1.3e-27  Score=209.29  Aligned_cols=154  Identities=15%  Similarity=0.156  Sum_probs=115.7

Q ss_pred             CEEEEecCCCCcchhhHHHHHHHHhCCEEEEeCcccccccCCCcchhhHHhhHh-CCCeeecChhhHHHHHHHHHHHcCC
Q 027097            1 MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLY-GKPIALADREMVEEKADKILSESQE   79 (228)
Q Consensus         1 ml~iVG~GpG~~~~lT~~A~~~L~~aDvV~~~~~~s~l~~~~~~~~~~~l~~~~-~~~i~~~~~~~~e~~~~~i~~~a~~   79 (228)
                      |||+||+||||+++||+||+++|++||+|+++++..      ..+   .++.+. ++++........++..+.+++.+++
T Consensus        17 ~LylVG~GpG~~~~lT~rA~~~L~~aDvI~~edtr~------~~~---lL~~~~~~~~~i~~~~~~~~~~~~~li~~l~~   87 (296)
T 3kwp_A           17 HLYLVPTPIGNLDDMTFRAVKTLTAVDLIAAEDTRN------TQK---LLNHFEITTKQISFHEHNTQERIPQLIAKLKQ   87 (296)
T ss_dssp             EEEECCBCSSCGGGCCHHHHHHHHHSSEEEESCHHH------HHH---HHHHTTCCCEEEECSTTTHHHHHHHHHHHHHT
T ss_pred             eEEEeccCCCCccchhhHHHHHHhHhhhhhhhcccc------HHH---HhhheeeeeeeeehhhcchhhHhHHHHHHHhc
Confidence            499999999999999999999999999999976311      112   344332 3444433334456677788888876


Q ss_pred             -CcEEEEe-cCCCCCcccHHHHHHHHHhCCCcEEEECCCCHHhHH-HHhCCccccCCceeEEecccCCCCCCCh--HHHH
Q 027097           80 -SNVAFLV-VGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNAV-GICGLQLYRFGETVSIPFFTETWRPGSF--YEKI  154 (228)
Q Consensus        80 -~~Va~l~-~GDP~~~~~~~~l~~~~~~~gi~v~viPGiSs~~a~-a~~Gl~l~~~~~~~~v~~~~~~~~p~~~--~~~i  154 (228)
                       ++||+++ +|||++|+++.++++.+.+.|++|+++||+||++++ +++|+|+.+|    .+  ...+  |...  ....
T Consensus        88 G~~Va~lsdaGdP~i~~~g~~lv~~~~~~gi~v~viPGiSA~~aA~a~~Glp~~~f----~f--~g~~--p~~~~~r~~~  159 (296)
T 3kwp_A           88 GMQIAQVSDAGMPSISDPGHELVNACIDAHIPVVPLPGANAGLTALIASGLAPQPF----YF--YGFL--DRKPKDRKAE  159 (296)
T ss_dssp             TCEEEEECSSBCTTSSHHHHHHHHHHHHTTCCEEECCCCCHHHHHHHHHSSCCSSE----EE--EEEC--CSSHHHHHHH
T ss_pred             CceEEEeccCCCCCCCCCchHHHHHHHHcCCCeeeCCCcccchHHHHhccCCCCce----eE--Eeec--cCCcHHHHHH
Confidence             8999998 999999999999999999999999999999999864 7899999754    22  2222  2221  2234


Q ss_pred             HHHhhcCCCeEEEEecc
Q 027097          155 KRNRSLGLHTLCLLDIR  171 (228)
Q Consensus       155 ~~~~~~g~~tlvlld~~  171 (228)
                      ++.+....+|+||++..
T Consensus       160 l~~l~~~~~tlV~y~~~  176 (296)
T 3kwp_A          160 IAGLAQRPETLIFYEAP  176 (296)
T ss_dssp             HHTTTTCCSEEEEEECG
T ss_pred             HHHhhcCCceeEeeeCc
Confidence            56677777899997765

>2zvb_A Precorrin-3 C17-methyltransferase; plasmid, structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: SAH; 2.00A {Thermus thermophilus} PDB: 2zvc_A*

Probab=99.95  E-value=2.5e-27  Score=207.49  Aligned_cols=171  Identities=22%  Similarity=0.284  Sum_probs=120.9

Q ss_pred             CEEEEecCCCCcchhhHHHHHHHHhCCEEEEeCcccccccCCCcchhhHHhhH--h-CCCeeecChhhHHHHHHHHHHHc
Q 027097            1 MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKL--Y-GKPIALADREMVEEKADKILSES   77 (228)
Q Consensus         1 ml~iVG~GpG~~~~lT~~A~~~L~~aDvV~~~~~~s~l~~~~~~~~~~~l~~~--~-~~~i~~~~~~~~e~~~~~i~~~a   77 (228)
                      |||+||+|||||++||++|+++|++||+|++  +..         .++.+..+  + ++++.........+..+.+++.+
T Consensus         3 ~l~lVG~GpGdp~lLT~rA~~~L~~ADvVig--~~~---------~l~ll~~~~~~~~k~~~~~~~~~e~~~~~~~l~~a   71 (295)
T 2zvb_A            3 ELFLVGMGPGDLPGLTQRAREALEGAEVVIG--YST---------YVKLLEEMGLLAGKEVVRKGMTEELDRAEEALERA   71 (295)
T ss_dssp             EEEEEECBTSSGGGSCHHHHHHHHHCSEEEC--CHH---------HHHHHHHHTCCTTSEEECTTCCSHHHHHHHHHHHH
T ss_pred             EEEEEECCCCChHHHHHHHHHHHHcCCEEEE--eCc---------HHHHHHHhhccCCCEEEecCCchHHHHHHHHHHHH
Confidence            5999999999999999999999999999993  321         12245444  2 45543322112224456677776


Q ss_pred             CC-CcEEEEecCCCCCcccHHHHHHHHHhCC--------------------CcEEEECCCCHHhHH-HHhCCccccCCce
Q 027097           78 QE-SNVAFLVVGDPFGATTHTDLVVRAKKLG--------------------IQVKAVHNASVMNAV-GICGLQLYRFGET  135 (228)
Q Consensus        78 ~~-~~Va~l~~GDP~~~~~~~~l~~~~~~~g--------------------i~v~viPGiSs~~a~-a~~Gl~l~~~~~~  135 (228)
                      ++ ++||+|++|||++|+++..+.+.+++.+                    ++++|||||||++++ |++|+||++.   
T Consensus        72 ~~G~~Va~L~~GDP~~yg~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~gi~veVIPGiSS~~aaaA~lG~plt~~---  148 (295)
T 2zvb_A           72 LSGQRVALVSGGDPGIYGMAAPVLELMEERGLKRVDGGVGLPGRFAGEEGEVFLAVIPGVTAANAVASLLGSPLAHD---  148 (295)
T ss_dssp             HTTCEEEEEESBCTTSSSSHHHHHHHHHHTTCEECSCCCSSSEEEEETTEEEEEEEECCCCHHHHHHHTTEETTSSC---
T ss_pred             HCCCcEEEEeCCCCChhhhHHHHHHHHHHhcccccccccccccccccccCCCcEEEECCHhHHHHHHHHhCCCccCC---
Confidence            66 8999999999999999999988887654                    999999999999975 6799999642   


Q ss_pred             eEEecccCCCCCCChHHHHHHHh---hcCCCeEEEEecccCCchhHHhhccccccCCCCccCHHHHHHHHHH
Q 027097          136 VSIPFFTETWRPGSFYEKIKRNR---SLGLHTLCLLDIRVKEPSLESLCRGKKLYEPPRYMTVNIAIEQLLE  204 (228)
Q Consensus       136 ~~v~~~~~~~~p~~~~~~i~~~~---~~g~~tlvlld~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~ll~  204 (228)
                      +.+  .+.|.+. .+++.+.+.+   ..+.+|++|++....                .|++++.++++.|++
T Consensus       149 ~~~--is~~~~~-~~~~~l~~~l~~~~~~~~t~vl~~~~~~----------------~r~~~~~~i~~~L~~  201 (295)
T 2zvb_A          149 TCL--ISLSDLL-TPWPLIERRLHAAGQGDFVVVLYNPQSK----------------RRDWQLRKSAEILLE  201 (295)
T ss_dssp             EEE--EECCCTT-SCHHHHHHHHHHHHHTTCEEEEESCCCS----------------SCTTHHHHHHHHHTT
T ss_pred             CeE--EeCCCCC-CCHHHHHHHHHHhhcCCcEEEEEcCCcc----------------cchhhHHHHHHHHHh
Confidence            122  2344331 2355554433   446789999987532                355677777777765

>3nut_A Precorrin-3 methylase; vitamin B12 pathway, cobalamin, methyltransferase, transfera; HET: SAH; 2.22A {Rhodobacter capsulatus}

Probab=99.95  E-value=1.7e-27  Score=203.89  Aligned_cols=152  Identities=16%  Similarity=0.163  Sum_probs=106.7

Q ss_pred             CEEEEecCCCCcchhhHHHHHHHHhCCEEEEeCcccccccCCCcchhhHHhhHhCCCeeec-ChhhHHHHHHHHHHHcCC
Q 027097            1 MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYGKPIALA-DREMVEEKADKILSESQE   79 (228)
Q Consensus         1 ml~iVG~GpG~~~~lT~~A~~~L~~aDvV~~~~~~s~l~~~~~~~~~~~l~~~~~~~i~~~-~~~~~e~~~~~i~~~a~~   79 (228)
                      ++|+||+|||||++||+||+++|++||+|++.+.  .+         +.+....++++... +.+..+ ..+.+++.+++
T Consensus        10 ~~~~vG~GPGd~~lLT~rA~~~L~~AdvI~g~d~--~~---------~~~~~~~~~~~~~~~~~~ei~-~~~~li~~~~~   77 (251)
T 3nut_A           10 WVTVAGLGPGREDLVTPEVTAALAEATDIVGYIP--YV---------ARIAPREGLTLHPTDNRVELD-RATHALEMAAE   77 (251)
T ss_dssp             EEEEEECBSSCGGGSCHHHHHHHHHCSEEEECGG--GG---------TTCCCCTTCEEEECCSSCCHH-HHHHHHHHHHT
T ss_pred             cEEEEEECCCCHHHHHHHHHHHHHhCCEEEEcCc--cc---------ccccccCCCEEeecCCHHHHH-HHHHHHHHHHC
Confidence            4799999999999999999999999999995432  11         01111123444322 122222 23467777765


Q ss_pred             -CcEEEEecCCCCCcccHHHHHHHHHh----CCCcEEEECCCCHHhHH-HHhCCccccCCceeEEecccCCCCCCChHHH
Q 027097           80 -SNVAFLVVGDPFGATTHTDLVVRAKK----LGIQVKAVHNASVMNAV-GICGLQLYRFGETVSIPFFTETWRPGSFYEK  153 (228)
Q Consensus        80 -~~Va~l~~GDP~~~~~~~~l~~~~~~----~gi~v~viPGiSs~~a~-a~~Gl~l~~~~~~~~v~~~~~~~~p~~~~~~  153 (228)
                       ++||+|++|||++|+++.++++.+.+    .|++++|||||||++++ |++|+||++....     .+.|.+. .+++.
T Consensus        78 G~~Vv~L~~GDP~i~g~g~~l~~~l~~~~~~~gi~veviPGiSS~~aa~a~~G~plt~~~~~-----~s~~~~~-~~~~~  151 (251)
T 3nut_A           78 GRRVVVVSSGDPGVFAMASALFEALEAHPEHAGTEIRILPGITAMLAAAAAAGAPLGHDFCA-----INLSDNL-KPFEI  151 (251)
T ss_dssp             TCEEEEEESBCTTSSSHHHHHHHHHHHCGGGTTCCEEEECCCCHHHHHHHHHEETTSSSEEE-----EESCCTT-SCHHH
T ss_pred             CCeEEEEeCCCcccccCHHHHHHHHHhhcccCCCcEEEECCHHHHHHHHHHhCCCccCCeEE-----EEecCCC-CChHH
Confidence             89999999999999999999999987    89999999999999975 6799999643222     2233322 12555


Q ss_pred             HHHHh---hcCCCeEEEEec
Q 027097          154 IKRNR---SLGLHTLCLLDI  170 (228)
Q Consensus       154 i~~~~---~~g~~tlvlld~  170 (228)
                      +.+.+   .....|+++++.
T Consensus       152 ~~~~l~~l~~~~~tlvl~~~  171 (251)
T 3nut_A          152 LEKRLRHAARGDFAMAFYNP  171 (251)
T ss_dssp             HHHHHHHHHHTTCEEEEESC
T ss_pred             HHHHHHHHhCCCCEEEEECC
Confidence            54433   456678888764

>2npn_A Putative cobalamin synthesis related protein; COBF, PSI-2, MAD, struc genomics, SAM, S-adenosylmethionine, MCSG; HET: MSE SAM; 1.60A {Corynebacterium diphtheriae}

Probab=99.94  E-value=3e-26  Score=196.00  Aligned_cols=133  Identities=21%  Similarity=0.378  Sum_probs=98.4

Q ss_pred             CEEEEecCCCCcchhhHHHHHHHHhCCEEEEeCcccccccCCCcch-----hhHHhhHh-CCCeeecC---h--------
Q 027097            1 MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDG-----LSTLEKLY-GKPIALAD---R--------   63 (228)
Q Consensus         1 ml~iVG~GpG~~~~lT~~A~~~L~~aDvV~~~~~~s~l~~~~~~~~-----~~~l~~~~-~~~i~~~~---~--------   63 (228)
                      |||+||+|||||++||+||+++|++||+|++++...      ..+.     .+.++.+. ++++....   +        
T Consensus         4 ~l~vVG~GpGd~~lLTl~A~~~L~~Advv~~~~~~~------~~~~l~~~~~~il~~~~~~~~~~~~~~p~~~~~~~~~~   77 (251)
T 2npn_A            4 TIYVIGIGTGSPEFLTLQAISGLRHAQAIVALDKGE------QKSDLLALRQKIVDTHAPGTPIYAVTDPERDRNPDNYE   77 (251)
T ss_dssp             EEEEEECBSSCGGGCCHHHHHHHHHCSEEEEEC---------CCHHHHHHHHHHHHHHSTTCCEEEECC----------C
T ss_pred             EEEEEEeCCCChhHhhHHHHHHHHhCCEEEEeCCCC------CchhhhhhHHHHHHHHhCCCEEEEecCCCcccchhhhh
Confidence            499999999999999999999999999999875321      0111     11344432 34433211   1        


Q ss_pred             -------hhHHHHH-HHHHHHcCC-CcEEEEecCCCCCcccHHHHHHHHHhCC---CcEEEECCCCHHhHH-HHhCCccc
Q 027097           64 -------EMVEEKA-DKILSESQE-SNVAFLVVGDPFGATTHTDLVVRAKKLG---IQVKAVHNASVMNAV-GICGLQLY  130 (228)
Q Consensus        64 -------~~~e~~~-~~i~~~a~~-~~Va~l~~GDP~~~~~~~~l~~~~~~~g---i~v~viPGiSs~~a~-a~~Gl~l~  130 (228)
                             ...++.. +.+.+.+++ ++||+|++|||++|+++.++++.+.+.|   ++++|||||||++++ |++|+||+
T Consensus        78 ~~~~~~~~~~~~~~~~~i~~~~~~g~~Vv~l~~GDP~iy~~~~~l~~~l~~~g~~~i~veviPGiSs~~aa~a~~g~pl~  157 (251)
T 2npn_A           78 EEVRRWHAERAHLLASTIRERTPDDGAVAFLVWGDPSLYDSTLRIIEHMRNLEDLHADVKVIPGITAVQVLTAEHGILIN  157 (251)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHSCTTCEEEEEESBCTTSSCCHHHHHHHHHHHHTCCEEEEEECCCCHHHHHHHHHTCCSS
T ss_pred             hhhhhhhhhHHHHHHHHHHHHHHCCCeEEEEeCCCcccccCHHHHHHHHHhcCCCCCcEEEeCChhHHHHHHHHcCCCcC
Confidence                   1122223 356677665 8999999999999999999999998876   999999999999975 67999999


Q ss_pred             cCCceeEEe
Q 027097          131 RFGETVSIP  139 (228)
Q Consensus       131 ~~~~~~~v~  139 (228)
                      ++.+++.+.
T Consensus       158 ~~~~~~~~~  166 (251)
T 2npn_A          158 RIGEAIHIT  166 (251)
T ss_dssp             CTTCCCEEE
T ss_pred             CCCCeEEEE
Confidence            877666665

>3nd1_A Precorrin-6A synthase/COBF protein; methyltransferase, deacetylase, transferase; HET: SAH; 1.50A {Rhodobacter capsulatus}

Probab=99.92  E-value=1.4e-24  Score=188.31  Aligned_cols=138  Identities=22%  Similarity=0.256  Sum_probs=99.7

Q ss_pred             EEEEecCCCCcchhhHHHHHHHHhCCEEEEeCcccccccCCCcchhhHHhhHh-C--CCeeecC---h-----------h
Q 027097            2 LYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLY-G--KPIALAD---R-----------E   64 (228)
Q Consensus         2 l~iVG~GpG~~~~lT~~A~~~L~~aDvV~~~~~~s~l~~~~~~~~~~~l~~~~-~--~~i~~~~---~-----------~   64 (228)
                      ||+||+|||||++||+||+++|++||+|++++....- ......+.+.++.+. .  ++++...   +           .
T Consensus        24 ly~VG~GPGdpellTlrA~~~L~~aDvI~~~~t~~~~-~~l~~~a~~il~~~~~~~~~~~i~~~~pm~~~~~~~Y~~~~~  102 (275)
T 3nd1_A           24 LSLIGIGTGNPRHITGQAVDAMNAADLILIPLKGADK-SDLAGLRRQICAAHLTNPATKVIDFALPVRDASNPSYRKGVD  102 (275)
T ss_dssp             EEEEECBSSCGGGCBHHHHHHHHHCSEEEEECCCSCG-GGCHHHHHHHHHHHCCCTTCEEEEECCCCC---------CHH
T ss_pred             EEEEEeCCCCHHHHHHHHHHHHHhCCEEEecCCcccc-hhhhhhHHHHHHHhhcccCcEEEEecCCccccccchhhhhhh
Confidence            9999999999999999999999999999998752100 000000122555543 2  3333211   0           0


Q ss_pred             hH-----HHHHHHHHHHcCC--CcEEEEecCCCCCcccHHHHHHHHHh-CCCcEEEECCCCHHhHH-HHhCCccccCCce
Q 027097           65 MV-----EEKADKILSESQE--SNVAFLVVGDPFGATTHTDLVVRAKK-LGIQVKAVHNASVMNAV-GICGLQLYRFGET  135 (228)
Q Consensus        65 ~~-----e~~~~~i~~~a~~--~~Va~l~~GDP~~~~~~~~l~~~~~~-~gi~v~viPGiSs~~a~-a~~Gl~l~~~~~~  135 (228)
                      .+     +.+.+.|++.+++  ++||+|++|||++|+++.++++.+.+ .|++++|||||||++++ +++|+|++++++.
T Consensus       103 ~~~~~~~~~~~~~i~~~l~~~G~~Va~l~~GDP~i~~~~~~l~~~l~~~~gi~veviPGiSs~~aa~a~~g~pl~~~~~~  182 (275)
T 3nd1_A          103 DWHDAIAETWLSEITAHVPGLEGRVALLVWGDPSLYDSTLRIAERLKSRLPLTTKVIPGITAIQALCAAHAIPLNDIGAP  182 (275)
T ss_dssp             HHHHHHHHHHHHHHHHHCTTSCEEEEEEESBCTTSSCSHHHHHHTTTTTSSEEEEEECCCCHHHHHHHHHTCCSSCTTCC
T ss_pred             hhhHhHHHHHHHHHHHHHHhCCCeEEEEeCCCCcccchHHHHHHHHHHhcCCCEEEecCccHHHHHHHHcCCCCccCCcE
Confidence            11     1233457777764  68999999999999999999999887 79999999999999975 6799999988655


Q ss_pred             eEEec
Q 027097          136 VSIPF  140 (228)
Q Consensus       136 ~~v~~  140 (228)
                      +.+..
T Consensus       183 ~~~l~  187 (275)
T 3nd1_A          183 VVITT  187 (275)
T ss_dssp             EEEEE
T ss_pred             EEEEc
Confidence            55543

>2bb3_A Cobalamin biosynthesis precorrin-6Y methylase (CB; beta, alpha-beta-alpha sandwich, structural genomics, PSI, P structure initiative; HET: SAH; 2.27A {Archaeoglobus fulgidus} SCOP: c.90.1.1

Probab=99.91  E-value=1.4e-24  Score=182.63  Aligned_cols=148  Identities=18%  Similarity=0.231  Sum_probs=97.9

Q ss_pred             CEEEEecCCCCcchhhHHHHHHHHhCCEEEEeCcccccccCCCcchhhHHhhHhC-CCeeecChhhHHHHHHHHHHHcCC
Q 027097            1 MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYG-KPIALADREMVEEKADKILSESQE   79 (228)
Q Consensus         1 ml~iVG~GpG~~~~lT~~A~~~L~~aDvV~~~~~~s~l~~~~~~~~~~~l~~~~~-~~i~~~~~~~~e~~~~~i~~~a~~   79 (228)
                      |+|+||+||| |++||+||+++|++||+|+++.           ++++.++.+.+ +....  ...+++..+.+.+..+.
T Consensus        23 ~l~lVG~GpG-p~lLTlrA~~~L~~AdvI~~~~-----------~~l~~~~~~~~~~~~~~--~~~~~~~~~~i~~~~~g   88 (221)
T 2bb3_A           23 MIWIVGSGTC-RGQTTERAKEIIERAEVIYGSR-----------RALELAGVVDDSRARIL--RSFKGDEIRRIMEEGRE   88 (221)
T ss_dssp             EEEEEECBSS-TTCCCHHHHHHHHHCSEEEECH-----------HHHHHTTCTTCTTEEEC--SCCSHHHHHHHHHHHHH
T ss_pred             EEEEEEeCCC-hhHhHHHHHHHHHhCCEEEECH-----------HHHHHhhhhcCCceEec--cchHHHHHHHHHHhcCC
Confidence            6999999999 9999999999999999999742           22224443322 22222  12234455556533334


Q ss_pred             CcEEEEecCCCCCcccHHHHHHHHHhCCCcEEEECCCCHHhHH-HHhCCccccCCceeEEecccCCCCCCChHHHHHHHh
Q 027097           80 SNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNAV-GICGLQLYRFGETVSIPFFTETWRPGSFYEKIKRNR  158 (228)
Q Consensus        80 ~~Va~l~~GDP~~~~~~~~l~~~~~~~gi~v~viPGiSs~~a~-a~~Gl~l~~~~~~~~v~~~~~~~~p~~~~~~i~~~~  158 (228)
                      ++||+|++|||++|+.+.. +.++ ..|++++|||||||++++ |++|+||++      +.+.+.|+++..  +.+. .+
T Consensus        89 ~~Vv~L~~GDP~i~~~~~~-l~~~-~~~i~veviPGiSS~~aa~a~~g~pl~~------~~~vs~~~r~~~--~~l~-~l  157 (221)
T 2bb3_A           89 REVAVISTGDPMVAGLGRV-LREI-AEDVEIKIEPAISSVQVALARLKVDLSE------VAVVDCHAKDFD--AELT-EL  157 (221)
T ss_dssp             SCEEEEESBCTTTTTSHHH-HHTS-CCSSEEEEECCCCHHHHHHHHHTCCGGG------EEEEEC----CC--HHHH-TH
T ss_pred             CcEEEEeCCCCccccCHHH-HHHh-cCCCCEEEECCHHHHHHHHHHhCCCcee------EEEEeecCCCch--HHHH-HH
Confidence            8999999999999997754 4444 358999999999999975 679999995      233345554322  2222 23


Q ss_pred             hcCCCeEEEEecccC
Q 027097          159 SLGLHTLCLLDIRVK  173 (228)
Q Consensus       159 ~~g~~tlvlld~~~~  173 (228)
                      .....++++++....
T Consensus       158 ~~~~~~vvl~~~~~~  172 (221)
T 2bb3_A          158 LKYRHLLILADSHFP  172 (221)
T ss_dssp             HHHCEEEEEECTTCC
T ss_pred             hcCCeEEEEECCCCC
Confidence            333477777876643

>3ffy_A Putative tetrapyrrole (corrin/porphyrin) methylas; structural genomics, APC62130.1, methyltransferase, PSI-2, P structure initiative; 2.00A {Bacteroides fragilis} PDB: 3fq6_A

Probab=97.00  E-value=0.0029  Score=47.10  Aligned_cols=96  Identities=19%  Similarity=0.194  Sum_probs=52.9

Q ss_pred             CCCCHHh-HHHHhCCccccCCceeEEecccCCCCCCChHHHHHHHhhcCCCeEEEEecccC-CchhHHh-----------
Q 027097          114 HNASVMN-AVGICGLQLYRFGETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLLDIRVK-EPSLESL-----------  180 (228)
Q Consensus       114 PGiSs~~-a~a~~Gl~l~~~~~~~~v~~~~~~~~p~~~~~~i~~~~~~g~~tlvlld~~~~-~~~~~~l-----------  180 (228)
                      ||+||+. |++++|+|...|   ..+.|...  +. . ...-++.+.....|+||++.-.. .+.++.|           
T Consensus         1 PG~sA~~~Al~~sGlp~~~F---~F~Gflp~--~~-~-r~~~l~~la~~~~TlVfyesp~Rl~~~l~~L~~~~g~~~~v~   73 (115)
T 3ffy_A            1 SNATAFVPALVASGLPNEKF---CFEGFLPQ--KK-G-RMTKLKSLVDEHRTMVFYESPHRLLKTLTQFAEYFGPERQVS   73 (115)
T ss_dssp             -CTTTHHHHHHHTTSCCSSE---EEEESCCS--ST-T-HHHHHHHTTTCCSEEEEEECTTTHHHHHHHHHHHHCTTCEEE
T ss_pred             CchhHHHHHHHHcCCCCCcE---EEEeeCCC--Cc-c-HHHHHHHHhCCCCeEEEEechHHHHHHHHHHHHhcCCCCEEE
Confidence            8999977 567899998753   12222221  11 1 23345566666789998665533 2233333           


Q ss_pred             -hcc-ccccCCCCccCHHHHHHHHHHHHHHhCCCCCCCCcEEEEE
Q 027097          181 -CRG-KKLYEPPRYMTVNIAIEQLLEVELLQGESGKAHELKIILK  223 (228)
Q Consensus       181 -~~~-~~~~~~~~~~~~~~a~~~ll~~~~~~~~~~~~~~~~~v~~  223 (228)
                       +|+ +|.|+.-...++.+.++.+.+       +.+..+.++||+
T Consensus        74 v~relTk~~E~~~rgtl~el~~~~~~-------~~~kGe~vivv~  111 (115)
T 3ffy_A           74 VSREISKIHEETVRGTLSELIEHFTA-------TDPRGEIVIVLA  111 (115)
T ss_dssp             EEEESSSSCEEEEEEEHHHHHHHHHH-------SCCCSSEEEEEC
T ss_pred             eeeccCCCceEEEEeeHHHHHHHHHh-------cCCCCCEEEEEe
Confidence             222 344444445678888877644       134556666664

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	228
d2deka1	265	c.90.1.1 (A:1-265) Diphthine synthase, DphB {Pyroc	1e-43
d1wdea_	289	c.90.1.1 (A:) Diphthine synthase, DphB {Aeropyrum	2e-42
d1vhva_	251	c.90.1.1 (A:) Diphthine synthase, DphB {Archaeon A	3e-38
d1cbfa_	239	c.90.1.1 (A:) Cobalt precorrin-4 methyltransferase	2e-09
d1s4da_	265	c.90.1.1 (A:) Uroporphyrin-III C-methyltransferase	3e-09
d1pjqa2	242	c.90.1.1 (A:216-457) Siroheme synthase CysG, domai	3e-09
d2bb3a1	195	c.90.1.1 (A:1-195) Precorrin-6y methylase CbiE {Ar	3e-08
d1ve2a1	235	c.90.1.1 (A:1-235) Uroporphyrin-III C-methyltransf	4e-08
d1va0a1	225	c.90.1.1 (A:2-226) Hypothetical protein TTHA0667 {	1e-05

>d2deka1 c.90.1.1 (A:1-265) Diphthine synthase, DphB {Pyrococcus horikoshii [TaxId: 53953]} Length = 265

class: Alpha and beta proteins (a/b)
fold: Tetrapyrrole methylase
superfamily: Tetrapyrrole methylase
family: Tetrapyrrole methylase
domain: Diphthine synthase, DphB
species: Pyrococcus horikoshii [TaxId: 53953]

 Score =  145 bits (367), Expect = 1e-43
 Identities = 90/223 (40%), Positives = 132/223 (59%), Gaps = 20/223 (8%)

Query: 1   MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYGKPIAL 60
           +LY IGLGL DERDIT++GLE  KKCD V+ E YTSL++       L  ++KL GK I +
Sbjct: 2   VLYFIGLGLYDERDITVKGLEIAKKCDYVFAEFYTSLMA----GTTLGRIQKLIGKEIRV 57

Query: 61  ADREMVEEKADKILSES-QESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVM 119
             RE VE   + I+    +E++VAFL  GDP  ATTH +L +RAK+ G++   +H  S+ 
Sbjct: 58  LSREDVELNFENIVLPLAKENDVAFLTPGDPLVATTHAELRIRAKRAGVESYVIHAPSIY 117

Query: 120 NAVGICGLQLYRFGETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLLDIRVKEPSLES 179
           +AVGI GL +Y+FG++ ++ +    W P S+Y+ IK N   GLHTL  LDI+ ++     
Sbjct: 118 SAVGITGLHIYKFGKSATVAYPEGNWFPTSYYDVIKENAERGLHTLLFLDIKAEK----- 172

Query: 180 LCRGKKLYEPPRYMTVNIAIEQLLEVELLQGESGKAHELKIIL 222
                       YMT N A+E LL+VE ++       +  +++
Sbjct: 173 ----------RMYMTANEAMELLLKVEDMKKGGVFTDDTLVVV 205

>d1wdea_ c.90.1.1 (A:) Diphthine synthase, DphB {Aeropyrum pernix [TaxId: 56636]} Length = 289

class: Alpha and beta proteins (a/b)
fold: Tetrapyrrole methylase
superfamily: Tetrapyrrole methylase
family: Tetrapyrrole methylase
domain: Diphthine synthase, DphB
species: Aeropyrum pernix [TaxId: 56636]

 Score =  143 bits (361), Expect = 2e-42
 Identities = 64/216 (29%), Positives = 95/216 (43%), Gaps = 21/216 (9%)

Query: 1   MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYGKPIAL 60
            L ++G G       TL  L+AV++ D VY+E+YT   S  L    +   E      +  
Sbjct: 4   TLLLVGWGYAPG-MQTLEALDAVRRADVVYVESYTMPGSSWLYKSVV---EAAGEARVVE 59

Query: 61  ADREMVEEKADKILSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNAS-VM 119
           A R  +EE++ +I+S + ++ VA +  GDP  ATTH+ L   A + G+ V+ +   S V 
Sbjct: 60  ASRRDLEERSREIVSRALDAVVAVVTAGDPMVATTHSSLAAEALEAGVAVRYIPGVSGVQ 119

Query: 120 NAVGICGLQLYRFGETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLLDIRVKEPSLES 179
            A G   L  YRFG TV++P       P S   +I  N   GLHT  LLD+         
Sbjct: 120 AARGATMLSFYRFGGTVTLPGPWRGVTPISVARRIYLNLCAGLHTTALLDVD-------- 171

Query: 180 LCRGKKLYEPPRYMTVNIAIEQLLEVELLQGESGKA 215
                   E    ++    +  LLE +        A
Sbjct: 172 --------ERGVQLSPGQGVSLLLEADREYAREAGA 199

>d1vhva_ c.90.1.1 (A:) Diphthine synthase, DphB {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} Length = 251

class: Alpha and beta proteins (a/b)
fold: Tetrapyrrole methylase
superfamily: Tetrapyrrole methylase
family: Tetrapyrrole methylase
domain: Diphthine synthase, DphB
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

 Score =  131 bits (330), Expect = 3e-38
 Identities = 60/203 (29%), Positives = 109/203 (53%), Gaps = 10/203 (4%)

Query: 1   MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYGKPIAL 60
           +L  +GLGL D +DI+++GLEAV++ D+VY+E YTS L        +  +E+ +GK +  
Sbjct: 2   LLTFVGLGLWDVKDISVKGLEAVREADEVYVEYYTSKL-----LSSIEEMEEFFGKRVVE 56

Query: 61  ADREMVEEKADKILSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMN 120
            +R  +EE + +++  ++  +V  LV GDP  ATTH+ + + A++ G++ + +H AS+  
Sbjct: 57  LERSDLEENSFRLIERAKSKSVVLLVPGDPMVATTHSAIKLEAERKGVKTRIIHGASIST 116

Query: 121 -AVGICGLQLYRFGETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLLDIRVKEPSLES 179
              G+ GL  YRFG++ ++ +        +    IK NRS+  HTL  LD+  +  ++  
Sbjct: 117 AVCGLTGLHNYRFGKSATVSWHR----SQTPVNVIKANRSIDAHTLLFLDLHPEPMTIGH 172

Query: 180 LCRGKKLYEPPRYMTVNIAIEQL 202
                   +        + I + 
Sbjct: 173 AVENLIAEDAQMKDLYAVGIARA 195

>d1cbfa_ c.90.1.1 (A:) Cobalt precorrin-4 methyltransferase CbiF {Bacillus megaterium [TaxId: 1404]} Length = 239

class: Alpha and beta proteins (a/b)
fold: Tetrapyrrole methylase
superfamily: Tetrapyrrole methylase
family: Tetrapyrrole methylase
domain: Cobalt precorrin-4 methyltransferase CbiF
species: Bacillus megaterium [TaxId: 1404]

 Score = 53.8 bits (128), Expect = 2e-09
 Identities = 31/153 (20%), Positives = 56/153 (36%), Gaps = 8/153 (5%)

Query: 2   LYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYGKPIALA 61
           LYIIG G GD   IT++GL+ +++ D V            L +  L    K   + +  A
Sbjct: 11  LYIIGAGPGDPDLITVKGLKLLQQADVVLYADS-------LVSQDLIAKSKPGAEVLKTA 63

Query: 62  DREMVEEKADKILSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNA 121
              + E     +    +   V  +  GDP       + +V  K+ G+ ++ V   + + A
Sbjct: 64  GMHLEEMVGTMLDRMREGKMVVRVHTGDPAMYGAIMEQMVLLKREGVDIEIVPGVTSVFA 123

Query: 122 VGIC-GLQLYRFGETVSIPFFTETWRPGSFYEK 153
                  +L     T ++       R      +
Sbjct: 124 AAAAAEAELTIPDLTQTVILTRAEGRTPVPEFE 156

>d1s4da_ c.90.1.1 (A:) Uroporphyrin-III C-methyltransferase (SUMT, UROM, CobA) {Pseudomonas denitrificans [TaxId: 43306]} Length = 265

class: Alpha and beta proteins (a/b)
fold: Tetrapyrrole methylase
superfamily: Tetrapyrrole methylase
family: Tetrapyrrole methylase
domain: Uroporphyrin-III C-methyltransferase (SUMT, UROM, CobA)
species: Pseudomonas denitrificans [TaxId: 43306]

 Score = 53.7 bits (128), Expect = 3e-09
 Identities = 24/154 (15%), Positives = 51/154 (33%), Gaps = 3/154 (1%)

Query: 2   LYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYGKPIALA 61
           ++++G G GD   +TL    A+++ D   I     +    L       + +  GK     
Sbjct: 12  VWLVGAGPGDPGLLTLHAANALRQAD--VIVHDALVNEDCLKLARPGAVLEFAGKRGGKP 69

Query: 62  DREMVEEKADKILSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNA 121
             +  +     +      + V  L  GDPF      +  +   +  +  + V   +    
Sbjct: 70  SPKQRDISLRLVELARAGNRVLRLKGGDPFVFGRGGEEALTLVEHQVPFRIVPGITAGIG 129

Query: 122 V-GICGLQLYRFGETVSIPFFTETWRPGSFYEKI 154
                G+ +       ++ F T     G   ++I
Sbjct: 130 GLAYAGIPVTHREVNHAVTFLTGHDSSGLVPDRI 163

>d1pjqa2 c.90.1.1 (A:216-457) Siroheme synthase CysG, domains 4 and 5 {Salmonella typhimurium [TaxId: 90371]} Length = 242

class: Alpha and beta proteins (a/b)
fold: Tetrapyrrole methylase
superfamily: Tetrapyrrole methylase
family: Tetrapyrrole methylase
domain: Siroheme synthase CysG, domains 4 and 5
species: Salmonella typhimurium [TaxId: 90371]

 Score = 53.1 bits (126), Expect = 3e-09
 Identities = 32/197 (16%), Positives = 62/197 (31%), Gaps = 4/197 (2%)

Query: 2   LYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYGKPIALA 61
           + ++G G GD   +TL+GL+ +++ D V    Y  L+S  +        ++++    A  
Sbjct: 3   VVLVGAGPGDAGLLTLKGLQQIQQADIV---VYDRLVSDDIMNLVRRDADRVFVGKRAGY 59

Query: 62  DREMVEEKADKILSESQE-SNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMN 120
                EE    +L E+Q+   V  L  GDPF      + +      GI    V   +  +
Sbjct: 60  HCVPQEEINQILLREAQKGKRVVRLKGGDPFIFGRGGEELETLCHAGIPFSVVPGITAAS 119

Query: 121 AVGICGLQLYRFGETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLLDIRVKEPSLESL 180
                        +                    +   +     +  + +       E L
Sbjct: 120 GCSAYSGIPLTHRDYAQSVRLVTGHLKTGGELDWENLAAEKQTLVFYMGLNQAATIQEKL 179

Query: 181 CRGKKLYEPPRYMTVNI 197
                  + P  +  N 
Sbjct: 180 IAFGMQADMPVALVENG 196

>d2bb3a1 c.90.1.1 (A:1-195) Precorrin-6y methylase CbiE {Archaeoglobus fulgidus [TaxId: 2234]} Length = 195

class: Alpha and beta proteins (a/b)
fold: Tetrapyrrole methylase
superfamily: Tetrapyrrole methylase
family: Tetrapyrrole methylase
domain: Precorrin-6y methylase CbiE
species: Archaeoglobus fulgidus [TaxId: 2234]

 Score = 50.2 bits (119), Expect = 3e-08
 Identities = 24/125 (19%), Positives = 48/125 (38%), Gaps = 13/125 (10%)

Query: 1   MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYGKPIAL 60
           M++I+G G       T R  E +++ + +Y       L           L  +     A 
Sbjct: 1   MIWIVGSGTCRG-QTTERAKEIIERAEVIY--GSRRALE----------LAGVVDDSRAR 47

Query: 61  ADREMVEEKADKILSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMN 120
             R    ++  +I+ E +E  VA +  GDP  A     L   A+ + I+++   ++  + 
Sbjct: 48  ILRSFKGDEIRRIMEEGREREVAVISTGDPMVAGLGRVLREIAEDVEIKIEPAISSVQVA 107

Query: 121 AVGIC 125
              + 
Sbjct: 108 LARLK 112

>d1ve2a1 c.90.1.1 (A:1-235) Uroporphyrin-III C-methyltransferase (SUMT, UROM, CobA) {Thermus thermophilus [TaxId: 274]} Length = 235

class: Alpha and beta proteins (a/b)
fold: Tetrapyrrole methylase
superfamily: Tetrapyrrole methylase
family: Tetrapyrrole methylase
domain: Uroporphyrin-III C-methyltransferase (SUMT, UROM, CobA)
species: Thermus thermophilus [TaxId: 274]

 Score = 49.9 bits (118), Expect = 4e-08
 Identities = 29/152 (19%), Positives = 47/152 (30%), Gaps = 5/152 (3%)

Query: 2   LYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYGKPIALA 61
           +Y++G G G    +TL+ L  ++  + V    +  L+  G+            GK     
Sbjct: 5   VYLVGAGFGGPEHLTLKALRVLEVAEVV---LHDRLVHPGV-LALAKGELVPVGKEGYGG 60

Query: 62  DREMVEEKADKILSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNA 121
                   A  I    +   VA L  GDP       +  +  ++ GI  + V   +    
Sbjct: 61  KTPQEAITARLIALAREGRVVARLKGGDPMVFGRGGEEALALRRAGIPFEVVPGVTSAVG 120

Query: 122 V-GICGLQLYRFGETVSIPFFTETWRPGSFYE 152
                GL L   G   S    T          
Sbjct: 121 ALSALGLPLTHRGLARSFAVATGHDPALPLPR 152

>d1va0a1 c.90.1.1 (A:2-226) Hypothetical protein TTHA0667 {Thermus thermophilus [TaxId: 274]} Length = 225

class: Alpha and beta proteins (a/b)
fold: Tetrapyrrole methylase
superfamily: Tetrapyrrole methylase
family: Tetrapyrrole methylase
domain: Hypothetical protein TTHA0667
species: Thermus thermophilus [TaxId: 274]

 Score = 42.3 bits (98), Expect = 1e-05
 Identities = 9/35 (25%), Positives = 17/35 (48%)

Query: 2  LYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTS 36
          +Y++G G GD   +TL+    +K+   V  +    
Sbjct: 3  VYLVGAGPGDPELLTLKAYRLLKEAPVVLYDRLVD 37

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	228
d2deka1	265	Diphthine synthase, DphB {Pyrococcus horikoshii [T	100.0
d1wdea_	289	Diphthine synthase, DphB {Aeropyrum pernix [TaxId:	100.0
d1vhva_	251	Diphthine synthase, DphB {Archaeon Archaeoglobus f	100.0
d1ve2a1	235	Uroporphyrin-III C-methyltransferase (SUMT, UROM,	99.95
d1s4da_	265	Uroporphyrin-III C-methyltransferase (SUMT, UROM,	99.95
d1cbfa_	239	Cobalt precorrin-4 methyltransferase CbiF {Bacillu	99.94
d2bb3a1	195	Precorrin-6y methylase CbiE {Archaeoglobus fulgidu	99.93
d1pjqa2	242	Siroheme synthase CysG, domains 4 and 5 {Salmonell	99.92
d1wyza1	233	Putative methytransferase BT4190 {Bacteroides thet	99.87
d1va0a1	225	Hypothetical protein TTHA0667 {Thermus thermophilu	99.84

>d2deka1 c.90.1.1 (A:1-265) Diphthine synthase, DphB {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: Tetrapyrrole methylase
superfamily: Tetrapyrrole methylase
family: Tetrapyrrole methylase
domain: Diphthine synthase, DphB
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=100.00  E-value=7e-38  Score=268.37  Aligned_cols=208  Identities=43%  Similarity=0.720  Sum_probs=177.3

Q ss_pred             CEEEEecCCCCcchhhHHHHHHHHhCCEEEEeCcccccccCCCcchhhHHhhHhCCCeeecChhhHHHHHHHHHHHc-CC
Q 027097            1 MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYGKPIALADREMVEEKADKILSES-QE   79 (228)
Q Consensus         1 ml~iVG~GpG~~~~lT~~A~~~L~~aDvV~~~~~~s~l~~~~~~~~~~~l~~~~~~~i~~~~~~~~e~~~~~i~~~a-~~   79 (228)
                      |||+||+|||||++||+||+++|++||+|+|+++++.+    .....+.++.+.+++.....+..+++..++++..+ ++
T Consensus         2 ~Ly~VG~GPG~pe~lT~~A~~~l~~aDvV~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g   77 (265)
T d2deka1           2 VLYFIGLGLYDERDITVKGLEIAKKCDYVFAEFYTSLM----AGTTLGRIQKLIGKEIRVLSREDVELNFENIVLPLAKE   77 (265)
T ss_dssp             EEEEEECBSSSGGGSBHHHHHHHHHCSEEEEECSSCCC----TTCCHHHHHHHHTSCCEEECHHHHHHHHHHHTHHHHTT
T ss_pred             EEEEEecCCCCHHHHHHHHHHHHHCCCEEEECCCCCcc----cHHHHHHHHHhcCCceeccCcchHHHHHHHHHHHHHcC
Confidence            89999999999999999999999999999999988654    12223356666666655555666666656555444 45


Q ss_pred             CcEEEEecCCCCCcccHHHHHHHHHhCCCcEEEECCCCHHhHHHHhCCccccCCceeEEecccCCCCCCChHHHHHHHhh
Q 027097           80 SNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNAVGICGLQLYRFGETVSIPFFTETWRPGSFYEKIKRNRS  159 (228)
Q Consensus        80 ~~Va~l~~GDP~~~~~~~~l~~~~~~~gi~v~viPGiSs~~a~a~~Gl~l~~~~~~~~v~~~~~~~~p~~~~~~i~~~~~  159 (228)
                      ++|++|++|||++|+++.++++.+++.|++++|+||||+++|++++|.+.+.++.+.++.+.+.++.|.++++.+..+..
T Consensus        78 ~~V~~l~~GDP~~~~~~~~l~~~~~~~~i~vevvPGiSs~~Aaaa~g~~~~~~~~~~s~~~~~~~~~~~~~~e~i~~~~~  157 (265)
T d2deka1          78 NDVAFLTPGDPLVATTHAELRIRAKRAGVESYVIHAPSIYSAVGITGLHIYKFGKSATVAYPEGNWFPTSYYDVIKENAE  157 (265)
T ss_dssp             SEEEEEESBCTTTTSSTHHHHHHHHHTTCEEEEECCCCHHHHGGGGTCCGGGBCCCEEECCCBTTBCCCHHHHHHHHHHH
T ss_pred             CCEEEEecCccccchhHHHHHHHHHhcCCCceecCCccHHHHHHHhCCCccccCceEEEEEeecCCcCCcchhhHHHHHH
Confidence            99999999999999999999999999999999999999999888889999999999999999999999999999999999


Q ss_pred             cCCCeEEEEecccCCchhHHhhccccccCCCCccCHHHHHHHHHHHHHHhCCCCCCCCcEEEE-Eeccc
Q 027097          160 LGLHTLCLLDIRVKEPSLESLCRGKKLYEPPRYMTVNIAIEQLLEVELLQGESGKAHELKIIL-KQLQT  227 (228)
Q Consensus       160 ~g~~tlvlld~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~ll~~~~~~~~~~~~~~~~~v~-~~~~~  227 (228)
                      .+.+++++++.....               ..+|++.++.++|+++.+..+++.++++|++++ .++++
T Consensus       158 ~~~~~~~~~~~~~~~---------------~~~~~~~~a~~~L~ei~~~l~~~g~~~dtpv~v~~~~g~  211 (265)
T d2deka1         158 RGLHTLLFLDIKAEK---------------RMYMTANEAMELLLKVEDMKKGGVFTDDTLVVVLARAGS  211 (265)
T ss_dssp             HTCBEEEEECEEGGG---------------TEECCHHHHHHHHHHHHHHHCCSSSCTTCEEEEEESTTS
T ss_pred             cCCchhhhhhhcCcc---------------cEEecHHHHHHHHHHHHHHHHhcCCCCCCeEEEEEECCC
Confidence            999999999987432               578999999999999999999999999987776 45543

>d1wdea_ c.90.1.1 (A:) Diphthine synthase, DphB {Aeropyrum pernix [TaxId: 56636]}

class: Alpha and beta proteins (a/b)
fold: Tetrapyrrole methylase
superfamily: Tetrapyrrole methylase
family: Tetrapyrrole methylase
domain: Diphthine synthase, DphB
species: Aeropyrum pernix [TaxId: 56636]

Probab=100.00  E-value=3.5e-38  Score=273.44  Aligned_cols=206  Identities=30%  Similarity=0.375  Sum_probs=169.2

Q ss_pred             CEEEEecCCCCcchhhHHHHHHHHhCCEEEEeCcccccccCCCcchhhH-HhhHhCCCeeecChhhHHHHHHHHHHHcCC
Q 027097            1 MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLST-LEKLYGKPIALADREMVEEKADKILSESQE   79 (228)
Q Consensus         1 ml~iVG~GpG~~~~lT~~A~~~L~~aDvV~~~~~~s~l~~~~~~~~~~~-l~~~~~~~i~~~~~~~~e~~~~~i~~~a~~   79 (228)
                      |||+||+|||+ ++||+||+++|++||+||++++++..    .....+. .+...++++...++...++..+.+++.+++
T Consensus         4 ~l~iVGlGpG~-eliTlrA~~~L~~aDvI~~e~~~~~~----~~~~~~~~~e~~~~~~~~~~~~~~~e~~~~~i~~~a~~   78 (289)
T d1wdea_           4 TLLLVGWGYAP-GMQTLEALDAVRRADVVYVESYTMPG----SSWLYKSVVEAAGEARVVEASRRDLEERSREIVSRALD   78 (289)
T ss_dssp             EEEEEECBSST-TCCCHHHHHHHHHCSEEEEECSSSTT----CHHHHHHHHHHHTSSSEEECCHHHHHTSHHHHTCCSSC
T ss_pred             EEEEEEeccCc-hHHHHHHHHHHHcCCEEEEccCCchh----hhhhhhhhhhhccCCceeccccchHHHHHHHHHHHhcC
Confidence            59999999995 99999999999999999999987532    0111112 232345566656666677777788887777


Q ss_pred             CcEEEEecCCCCCcccHHHHHHHHHhCCCcEEEECCCCHHhHH-HHhCCccccCCceeEEecccCCCCCCChHHHHHHHh
Q 027097           80 SNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNAV-GICGLQLYRFGETVSIPFFTETWRPGSFYEKIKRNR  158 (228)
Q Consensus        80 ~~Va~l~~GDP~~~~~~~~l~~~~~~~gi~v~viPGiSs~~a~-a~~Gl~l~~~~~~~~v~~~~~~~~p~~~~~~i~~~~  158 (228)
                      ++|++|++|||++|+++.+++.++++.|+++++||||||++|+ |++|+|+++|+.+.++++...+++|.++++.++.|+
T Consensus        79 ~~va~L~~GDP~i~~~~~~l~~~~~~~gi~v~vIPGiSs~~aA~a~~Gl~~~~f~~~~sl~~~~~~~~p~s~~~~i~~~~  158 (289)
T d1wdea_          79 AVVAVVTAGDPMVATTHSSLAAEALEAGVAVRYIPGVSGVQAARGATMLSFYRFGGTVTLPGPWRGVTPISVARRIYLNL  158 (289)
T ss_dssp             CEEEEEESBCTTSSSSHHHHHHHHHHTTCEEEEECCCCHHHHHHHHHTCCGGGEEEEEEECCGGGCCCCHHHHHHHHHHH
T ss_pred             CCeEEEeCCCCcccccHHHHHHHHHhcCCcEEEECCHhHHHHHHHHhCCCcccccEEEEeeeecCCcCCCchHHHHHHHH
Confidence            9999999999999999999999999999999999999999865 689999999999999999999999999999999999


Q ss_pred             hcCCCeEEEEecccCCchhHHhhccccccCCCCccCHHHHHHHHHHHHHHhCC-----CCCCCCcEEEE-Eeccc
Q 027097          159 SLGLHTLCLLDIRVKEPSLESLCRGKKLYEPPRYMTVNIAIEQLLEVELLQGE-----SGKAHELKIIL-KQLQT  227 (228)
Q Consensus       159 ~~g~~tlvlld~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~ll~~~~~~~~-----~~~~~~~~~v~-~~~~~  227 (228)
                      ..|.||++|+|++..                .++|.+.++..+|+++.++...     ..+.+++.+++ .|+++
T Consensus       159 ~~~l~tlvl~~~~~~----------------~~~m~~~~~~~~l~e~~~~~~~~~~~~~~~~~~~~v~v~~~lg~  217 (289)
T d1wdea_         159 CAGLHTTALLDVDER----------------GVQLSPGQGVSLLLEADREYAREAGAPALLARLPSVLVEAGAGG  217 (289)
T ss_dssp             HHTCEEEEEECBCTT----------------SCBCCHHHHHHHHHHHHHHHHHHHTSCCCGGGSCEEEEECCGGG
T ss_pred             HcCCchhhhhhcccc----------------CceeeHHHHHHHHHHHHHHHHHhccchhhhCCCCeEEEEEeCCC
Confidence            999999999999843                5789999999999998766532     24455655554 56654

>d1vhva_ c.90.1.1 (A:) Diphthine synthase, DphB {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: Tetrapyrrole methylase
superfamily: Tetrapyrrole methylase
family: Tetrapyrrole methylase
domain: Diphthine synthase, DphB
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=100.00  E-value=2.8e-37  Score=262.61  Aligned_cols=194  Identities=35%  Similarity=0.647  Sum_probs=159.0

Q ss_pred             CEEEEecCCCCcchhhHHHHHHHHhCCEEEEeCcccccccCCCcchhhHHhhHhCCCeeecChhhHHHHHHHHHHHcCCC
Q 027097            1 MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYGKPIALADREMVEEKADKILSESQES   80 (228)
Q Consensus         1 ml~iVG~GpG~~~~lT~~A~~~L~~aDvV~~~~~~s~l~~~~~~~~~~~l~~~~~~~i~~~~~~~~e~~~~~i~~~a~~~   80 (228)
                      |||+||+|||||++||+||+++|++||+|++++|++.+     ....+.+..++++++...++..+++..+.+++.++++
T Consensus         2 mL~iVG~GpG~~~~iT~~a~~~l~~advv~~~~~~~~~-----~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~   76 (251)
T d1vhva_           2 LLTFVGLGLWDVKDISVKGLEAVREADEVYVEYYTSKL-----LSSIEEMEEFFGKRVVELERSDLEENSFRLIERAKSK   76 (251)
T ss_dssp             EEEEEECBSSSGGGSBHHHHHHHHHCSEEEEECSSCCC-----SSCHHHHHHHHTSCCEEECHHHHTTTHHHHHHHHTTS
T ss_pred             eEEEEeeCCCCHHHHHHHHHHHHHcCCEEEEcCCCccc-----hhcHHHHHHHhCCccccCcchhHHHHHHHHHHHhcCC
Confidence            99999999999999999999999999999999987654     1112255556677666666766666677788887779


Q ss_pred             cEEEEecCCCCCcccHHHHHHHHHhCCCcEEEECCCCHHhHH-HHhCCccccCCceeEEecccCCCCCCChHHHHHHHhh
Q 027097           81 NVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNAV-GICGLQLYRFGETVSIPFFTETWRPGSFYEKIKRNRS  159 (228)
Q Consensus        81 ~Va~l~~GDP~~~~~~~~l~~~~~~~gi~v~viPGiSs~~a~-a~~Gl~l~~~~~~~~v~~~~~~~~p~~~~~~i~~~~~  159 (228)
                      +|++|++|||++|+++.++++.+.++|++++|+|||||++|+ +++|+|+++|+...++++..    +.++++.++.+..
T Consensus        77 ~vv~L~~GDP~i~~~~~~l~~~~~~~gi~vevvPGiSs~~aaaa~~gl~~~~~~~~~~i~~~~----~~~~~~~i~~~~~  152 (251)
T d1vhva_          77 SVVLLVPGDPMVATTHSAIKLEAERKGVKTRIIHGASISTAVCGLTGLHNYRFGKSATVSWHR----SQTPVNVIKANRS  152 (251)
T ss_dssp             EEEEEESBCTTSSSHHHHHHHHHHHTTCCEEEECCCCHHHHHHHHHCCCGGGBCCCEEECSSC----CSHHHHHHHHHHH
T ss_pred             cEEEEecCCccccchHHHHHHHHHHcCCCcEEEecchHHHHHHHHhCCCccccceeEeeeccC----CCCchhhHHHHHh
Confidence            999999999999999999999999999999999999999975 67999999999998887643    3456899999999


Q ss_pred             cCCCeEEEEecccCCchhHHhhccccccCCCCccCHHHHHHHHHHHHHHhCCCCCCCCcEEE-EEeccc
Q 027097          160 LGLHTLCLLDIRVKEPSLESLCRGKKLYEPPRYMTVNIAIEQLLEVELLQGESGKAHELKII-LKQLQT  227 (228)
Q Consensus       160 ~g~~tlvlld~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~ll~~~~~~~~~~~~~~~~~v-~~~~~~  227 (228)
                      .+.||+|+++..                  .++|.+.++.++++..+.      ..+++.++ +.|+++
T Consensus       153 ~~~~Tlv~~~~~------------------~~~~~~~~~~~~ll~~~~------~~~d~~v~vv~~lg~  197 (251)
T d1vhva_         153 IDAHTLLFLDLH------------------PEPMTIGHAVENLIAEDA------QMKDLYAVGIARAGS  197 (251)
T ss_dssp             TTCBEEEEECCS------------------SSCCCHHHHHHHHHHHCG------GGGGSEEEEEESTTS
T ss_pred             cCCCcEEEeccc------------------cccchHHHHHHHHHHHcC------CCCCCcEEEEEeCCC
Confidence            999999999987                  457899999988876433      24455544 466553

>d1ve2a1 c.90.1.1 (A:1-235) Uroporphyrin-III C-methyltransferase (SUMT, UROM, CobA) {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: Tetrapyrrole methylase
superfamily: Tetrapyrrole methylase
family: Tetrapyrrole methylase
domain: Uroporphyrin-III C-methyltransferase (SUMT, UROM, CobA)
species: Thermus thermophilus [TaxId: 274]

Probab=99.95  E-value=1.5e-27  Score=198.26  Aligned_cols=133  Identities=21%  Similarity=0.277  Sum_probs=102.5

Q ss_pred             EEEEecCCCCcchhhHHHHHHHHhCCEEEEeCcccccccCCCcchhhHHhhHh------CCCeeecChhhHHHHHHHHHH
Q 027097            2 LYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLY------GKPIALADREMVEEKADKILS   75 (228)
Q Consensus         2 l~iVG~GpG~~~~lT~~A~~~L~~aDvV~~~~~~s~l~~~~~~~~~~~l~~~~------~~~i~~~~~~~~e~~~~~i~~   75 (228)
                      ||+||+|||||++||+||+++|++||+|+++.+.+       .+   .++...      ++... .....+++..+.+.+
T Consensus         5 l~iVG~GPGdp~~lT~~a~~~L~~aDvV~~~~~~~-------~~---~l~~~~~~~~~~~~~~~-~~~~~~~~~~~~i~~   73 (235)
T d1ve2a1           5 VYLVGAGFGGPEHLTLKALRVLEVAEVVLHDRLVH-------PG---VLALAKGELVPVGKEGY-GGKTPQEAITARLIA   73 (235)
T ss_dssp             EEEEECBSSSGGGSBHHHHHHHHHCSEEEECTTSC-------HH---HHTTCCSEEEEC--------CCCHHHHHHHHHH
T ss_pred             EEEEEcCCCCHHHHHHHHHHHHHcCCEEEEECCCC-------HH---HHHhhhhhccccceecc-cccchHHHHHHHHHH
Confidence            89999999999999999999999999999876532       12   222111      11111 112235566677778


Q ss_pred             HcCC-CcEEEEecCCCCCcccHHHHHHHHHhCCCcEEEECCCCHHhHH-HHhCCccccCCceeEEecccCCC
Q 027097           76 ESQE-SNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNAV-GICGLQLYRFGETVSIPFFTETW  145 (228)
Q Consensus        76 ~a~~-~~Va~l~~GDP~~~~~~~~l~~~~~~~gi~v~viPGiSs~~a~-a~~Gl~l~~~~~~~~v~~~~~~~  145 (228)
                      .+++ ++|+++++|||++|+++.++++.+.+++++++|||||||++++ |++|++|++++....+...+.+.
T Consensus        74 ~~~~g~~V~~l~~Gdp~~~~~~~~~~~~~~~~~i~veviPGiSs~~aaaa~~g~~~~~~~~~~~~~~~~~~~  145 (235)
T d1ve2a1          74 LAREGRVVARLKGGDPMVFGRGGEEALALRRAGIPFEVVPGVTSAVGALSALGLPLTHRGLARSFAVATGHD  145 (235)
T ss_dssp             HHHTTCEEEEEESBCTTSSTTHHHHHHHHHHHTCCEEEECCCCTTHHHHHHTTCCSCBTTTBSCEEEEESSC
T ss_pred             HHHcCCeEEEEecccccccchHHHHHHHHhhCCCCEEEeccccHHHhhhhhcCCcccccccccccccccchh
Confidence            7777 8899999999999999999999999999999999999999975 67999999888777666655443

>d1s4da_ c.90.1.1 (A:) Uroporphyrin-III C-methyltransferase (SUMT, UROM, CobA) {Pseudomonas denitrificans [TaxId: 43306]}

class: Alpha and beta proteins (a/b)
fold: Tetrapyrrole methylase
superfamily: Tetrapyrrole methylase
family: Tetrapyrrole methylase
domain: Uroporphyrin-III C-methyltransferase (SUMT, UROM, CobA)
species: Pseudomonas denitrificans [TaxId: 43306]

Probab=99.95  E-value=6.8e-27  Score=198.30  Aligned_cols=161  Identities=14%  Similarity=0.166  Sum_probs=117.9

Q ss_pred             EEEEecCCCCcchhhHHHHHHHHhCCEEEEeCcccccccCCCcchhhHHhhHhC-CCeee------cChhhHHHHHHHHH
Q 027097            2 LYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYG-KPIAL------ADREMVEEKADKIL   74 (228)
Q Consensus         2 l~iVG~GpG~~~~lT~~A~~~L~~aDvV~~~~~~s~l~~~~~~~~~~~l~~~~~-~~i~~------~~~~~~e~~~~~i~   74 (228)
                      ||+||+|||||++||+||+++|++||+|+++.+..       .+   .++.... .....      ......++..+.++
T Consensus        12 l~iVG~GPGdp~~iT~~a~~~L~~ADvV~~~~~~~-------~~---~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (265)
T d1s4da_          12 VWLVGAGPGDPGLLTLHAANALRQADVIVHDALVN-------ED---CLKLARPGAVLEFAGKRGGKPSPKQRDISLRLV   81 (265)
T ss_dssp             EEEEECBSSCTTSSBHHHHHHHHHCSEEEECSCSC-------TT---GGGGSSTTCCEEECSCCC--CCCCHHHHHHHHH
T ss_pred             EEEEEeCCCCHHHHHHHHHHHHHcCCEEEEccccC-------HH---HHhhcccccEeeecccccccccchhHHHHHHHH
Confidence            89999999999999999999999999999875532       22   2221111 11111      11123455666777


Q ss_pred             HHcCC-CcEEEEecCCCCCcccHHHHHHHHHhCCCcEEEECCCCHHhHH-HHhCCccccCCceeEEecccCCCCCCCh-H
Q 027097           75 SESQE-SNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNAV-GICGLQLYRFGETVSIPFFTETWRPGSF-Y  151 (228)
Q Consensus        75 ~~a~~-~~Va~l~~GDP~~~~~~~~l~~~~~~~gi~v~viPGiSs~~a~-a~~Gl~l~~~~~~~~v~~~~~~~~p~~~-~  151 (228)
                      +.+++ ++|+++++|||++|+++..+.+.+.+.|++++|+|||||++++ +++|++++.++.+.++.+.+.+...... .
T Consensus        82 ~~a~~G~~V~~l~~GDp~~~~~~~~~~~~~~~~~~~~eViPGiss~~aa~a~~g~~l~~~~~~~~~~~~~~~~~~~~~~~  161 (265)
T d1s4da_          82 ELARAGNRVLRLKGGDPFVFGRGGEEALTLVEHQVPFRIVPGITAGIGGLAYAGIPVTHREVNHAVTFLTGHDSSGLVPD  161 (265)
T ss_dssp             HHHHTTCCEEEEESBCTTSSSSHHHHHHHHHTTTCCEEEECCCCTTTHHHHHTTCCSCCTTTCSEEEEEECCC-------
T ss_pred             HHHHCCCcEEEEecCCcccccchHHHHHHHHhcCCceEEecccccchhhHHHhhhhcccCCCceEEEEecCCCccccccc
Confidence            88877 8999999999999999999999999999999999999999976 5799999998888777777666543221 1


Q ss_pred             HHHHHHhhcCCCeEEEEeccc
Q 027097          152 EKIKRNRSLGLHTLCLLDIRV  172 (228)
Q Consensus       152 ~~i~~~~~~g~~tlvlld~~~  172 (228)
                      ......+.....|+++++...
T Consensus       162 ~~~l~~~~~~~~~~v~~~~~~  182 (265)
T d1s4da_         162 RINWQGIASGSPVIVMYMAMK  182 (265)
T ss_dssp             CCCHHHHHTTCSEEEEESCST
T ss_pred             hHHHHHHhccCcceeccchHH
Confidence            122345556778988877653

>d1cbfa_ c.90.1.1 (A:) Cobalt precorrin-4 methyltransferase CbiF {Bacillus megaterium [TaxId: 1404]}

class: Alpha and beta proteins (a/b)
fold: Tetrapyrrole methylase
superfamily: Tetrapyrrole methylase
family: Tetrapyrrole methylase
domain: Cobalt precorrin-4 methyltransferase CbiF
species: Bacillus megaterium [TaxId: 1404]

Probab=99.94  E-value=9.5e-26  Score=187.17  Aligned_cols=162  Identities=22%  Similarity=0.199  Sum_probs=121.3

Q ss_pred             EEEEecCCCCcchhhHHHHHHHHhCCEEEEeCcccccccCCCcchhhHHhhHhCC-CeeecChhhHHHHHHHHHHHcCC-
Q 027097            2 LYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYGK-PIALADREMVEEKADKILSESQE-   79 (228)
Q Consensus         2 l~iVG~GpG~~~~lT~~A~~~L~~aDvV~~~~~~s~l~~~~~~~~~~~l~~~~~~-~i~~~~~~~~e~~~~~i~~~a~~-   79 (228)
                      ||+||+|||||++||++|+++|++||+|+++++.      ...+   .++.+... .........+.+..+.+.+.+++ 
T Consensus        11 lyiVG~GpGdp~~lT~~A~~~L~~aDvv~~~~~~------~~~~---ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g   81 (239)
T d1cbfa_          11 LYIIGAGPGDPDLITVKGLKLLQQADVVLYADSL------VSQD---LIAKSKPGAEVLKTAGMHLEEMVGTMLDRMREG   81 (239)
T ss_dssp             EEEEECBSSCGGGSCHHHHHHHHHCSEEEECTTT------SCHH---HHTTSCTTCEEEECTTCCHHHHHHHHHHHHTTT
T ss_pred             EEEEEECCCCHHHHHHHHHHHHHcCCEEEEeCCc------CCHH---HHhhhcccccccccccchHHHHHHHHHHHhhcC
Confidence            8999999999999999999999999999986542      1122   34433322 22222223355556666666666 


Q ss_pred             CcEEEEecCCCCCcccHHHHHHHHHhCCCcEEEECCCCHHhHH-HHhCCccccCCceeEEecccCCCCCCChHHHHHHHh
Q 027097           80 SNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNAV-GICGLQLYRFGETVSIPFFTETWRPGSFYEKIKRNR  158 (228)
Q Consensus        80 ~~Va~l~~GDP~~~~~~~~l~~~~~~~gi~v~viPGiSs~~a~-a~~Gl~l~~~~~~~~v~~~~~~~~p~~~~~~i~~~~  158 (228)
                      ++|+++++|||++|+++.++...+.+.+++++|+|||||++++ +++|++++.++...++.+.+.|.+............
T Consensus        82 ~~V~~l~~Gdp~~~~~~~~~~~~~~~~~~~~~vipGiss~~~a~a~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  161 (239)
T d1cbfa_          82 KMVVRVHTGDPAMYGAIMEQMVLLKREGVDIEIVPGVTSVFAAAAAAEAELTIPDLTQTVILTRAEGRTPVPEFEKLTDL  161 (239)
T ss_dssp             CCEEEEESBCTTTTCCCHHHHHHHHHTTCEEEEECCCCHHHHHHHHTTCCSCBTTTBCCEEEEECCSSSCCCGGGCHHHH
T ss_pred             ceEEEeeccccccccccccccccccccceeeEeccCccchhhhhhhcCcccccCcceeeeeeecccCCCccchHHHHHHH
Confidence            8999999999999999999999999999999999999999975 679999999988888888777776433333333455


Q ss_pred             hcCCCeEEEEeccc
Q 027097          159 SLGLHTLCLLDIRV  172 (228)
Q Consensus       159 ~~g~~tlvlld~~~  172 (228)
                      ..+.++.+++....
T Consensus       162 ~~~~~~~~~~~~~~  175 (239)
T d1cbfa_         162 AKHKCTIALFLSST  175 (239)
T ss_dssp             HTTCSEEEEESCTT
T ss_pred             hhcccccccccccc
Confidence            56667777766554

>d2bb3a1 c.90.1.1 (A:1-195) Precorrin-6y methylase CbiE {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: Tetrapyrrole methylase
superfamily: Tetrapyrrole methylase
family: Tetrapyrrole methylase
domain: Precorrin-6y methylase CbiE
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=99.93  E-value=1.5e-26  Score=188.06  Aligned_cols=148  Identities=18%  Similarity=0.201  Sum_probs=104.2

Q ss_pred             CEEEEecCCCCcchhhHHHHHHHHhCCEEEEeCcccccccCCCcchhhHHhhHhCCCeeecChhhHHHHHHHHHHHcCCC
Q 027097            1 MLYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYGKPIALADREMVEEKADKILSESQES   80 (228)
Q Consensus         1 ml~iVG~GpG~~~~lT~~A~~~L~~aDvV~~~~~~s~l~~~~~~~~~~~l~~~~~~~i~~~~~~~~e~~~~~i~~~a~~~   80 (228)
                      |||+||+|||+++ ||+||+++|++||+|+++.           ++++.+..+...+.........+ ....+.+.++++
T Consensus         1 mi~~vG~GpG~~~-lT~rA~~~l~~advv~g~~-----------~~l~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~g~   67 (195)
T d2bb3a1           1 MIWIVGSGTCRGQ-TTERAKEIIERAEVIYGSR-----------RALELAGVVDDSRARILRSFKGD-EIRRIMEEGRER   67 (195)
T ss_dssp             EEEEEECBSSTTC-CCHHHHHHHHHCSEEEECH-----------HHHHHTTCTTCTTEEECSCCSHH-HHHHHHHHHHHS
T ss_pred             CEEEEecCCCChH-HHHHHHHHHHhCCEEEECc-----------hHHhhhhcccCCeEEecCCccHH-HHHHHHHHHcCC
Confidence            9999999999986 8999999999999999643           22233433333333222222222 334455555568


Q ss_pred             cEEEEecCCCCCcccHHHHHHHHHhCCCcEEEECCCCHHhHH-HHhCCccccCCceeEEecccCCCCCCChHHHHHHHhh
Q 027097           81 NVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNAV-GICGLQLYRFGETVSIPFFTETWRPGSFYEKIKRNRS  159 (228)
Q Consensus        81 ~Va~l~~GDP~~~~~~~~l~~~~~~~gi~v~viPGiSs~~a~-a~~Gl~l~~~~~~~~v~~~~~~~~p~~~~~~i~~~~~  159 (228)
                      +||+|+.|||++|+++.++.+++.  +.+++++|||||++++ |++|+|+.++   ..   .+.|+++   .+.+...+.
T Consensus        68 ~vv~L~~GDP~iy~~~~~l~~~~~--~~~~eviPGiss~~aaaa~~~~p~~~~---~~---i~~~~~~---~~~~~~~l~  136 (195)
T d2bb3a1          68 EVAVISTGDPMVAGLGRVLREIAE--DVEIKIEPAISSVQVALARLKVDLSEV---AV---VDCHAKD---FDAELTELL  136 (195)
T ss_dssp             CEEEEESBCTTTTTSHHHHHTSCC--SSEEEEECCCCHHHHHHHHHTCCGGGE---EE---EEC-------CCHHHHTHH
T ss_pred             CeEEEEcCCCcccchhHHHhhhhc--ccceecCCcchhhhhHHHHhcCCCCCc---EE---EecCCCC---hHHHHHHhh
Confidence            999999999999999988887664  4689999999999975 5799999753   22   2445554   345666777


Q ss_pred             cCCCeEEEEeccc
Q 027097          160 LGLHTLCLLDIRV  172 (228)
Q Consensus       160 ~g~~tlvlld~~~  172 (228)
                      .+.++++|+|...
T Consensus       137 ~~~~~~vl~~~~~  149 (195)
T d2bb3a1         137 KYRHLLILADSHF  149 (195)
T ss_dssp             HHCEEEEEECTTC
T ss_pred             cCCeEEEEeCCcc
Confidence            8888999988653

>d1pjqa2 c.90.1.1 (A:216-457) Siroheme synthase CysG, domains 4 and 5 {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: Tetrapyrrole methylase
superfamily: Tetrapyrrole methylase
family: Tetrapyrrole methylase
domain: Siroheme synthase CysG, domains 4 and 5
species: Salmonella typhimurium [TaxId: 90371]

Probab=99.92  E-value=1.2e-24  Score=180.80  Aligned_cols=133  Identities=23%  Similarity=0.277  Sum_probs=102.0

Q ss_pred             EEEEecCCCCcchhhHHHHHHHHhCCEEEEeCcccccccCCCcchhhHHhhHhC-CCeee-------cChhhHHHHHHHH
Q 027097            2 LYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYG-KPIAL-------ADREMVEEKADKI   73 (228)
Q Consensus         2 l~iVG~GpG~~~~lT~~A~~~L~~aDvV~~~~~~s~l~~~~~~~~~~~l~~~~~-~~i~~-------~~~~~~e~~~~~i   73 (228)
                      ||+||+|||||++||+||+++|++||+|+++.+..       .    .+..+.. +....       .....+++..+.+
T Consensus         3 l~~VGiGPGdp~~lT~ra~~~l~~Advv~~~~~~~-------~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   71 (242)
T d1pjqa2           3 VVLVGAGPGDAGLLTLKGLQQIQQADIVVYDRLVS-------D----DIMNLVRRDADRVFVGKRAGYHCVPQEEINQIL   71 (242)
T ss_dssp             EEEEECBSSCGGGSBHHHHHHHHHCSEEEECTTSC-------H----HHHTTSCTTSEEEECSCC---CCCTTHHHHHHH
T ss_pred             EEEEeeCCCChHHHHHHHHHHHHcCCEEEEEcccC-------H----HHHhhhhhhccccccccccccchhhHHHHHHHH
Confidence            89999999999999999999999999999765321       1    2222222 11111       1122356667777


Q ss_pred             HHHcCC-CcEEEEecCCCCCcccHHHHHHHHHhCCCcEEEECCCCHHhHH-HHhCCccccCCceeEEecccCCC
Q 027097           74 LSESQE-SNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNAV-GICGLQLYRFGETVSIPFFTETW  145 (228)
Q Consensus        74 ~~~a~~-~~Va~l~~GDP~~~~~~~~l~~~~~~~gi~v~viPGiSs~~a~-a~~Gl~l~~~~~~~~v~~~~~~~  145 (228)
                      .+.+.+ ++|+++++|||++|+++..+.+.+.+.+++++++||+||++++ |++|+++..++...+..+...+.
T Consensus        72 ~~~~~~g~~V~~l~~Gdp~~~~~~~~l~~~~~~~~~~v~vipGiss~~~aaa~~~~~~~~~~~~~~~~~~~~~~  145 (242)
T d1pjqa2          72 LREAQKGKRVVRLKGGDPFIFGRGGEELETLCHAGIPFSVVPGITAASGCSAYSGIPLTHRDYAQSVRLVTGHL  145 (242)
T ss_dssp             HHHHHTTCEEEEEESBCTTTSSSHHHHHTTTTTTTCCEEEECCCCHHHHHHHHTTCCSCCTTTCSEEEEECC--
T ss_pred             HHHHHCCCeEEEEeCCCcceecchhhHHHHHhhcCceEeecCCcchHHHHHHHhhhccccCCceeeeeecccCC
Confidence            777766 8999999999999999999999999999999999999999964 67999999888777766655433

>d1wyza1 c.90.1.1 (A:2-234) Putative methytransferase BT4190 {Bacteroides thetaiotaomicron [TaxId: 818]}

class: Alpha and beta proteins (a/b)
fold: Tetrapyrrole methylase
superfamily: Tetrapyrrole methylase
family: Tetrapyrrole methylase
domain: Putative methytransferase BT4190
species: Bacteroides thetaiotaomicron [TaxId: 818]

Probab=99.87  E-value=4.2e-22  Score=166.57  Aligned_cols=159  Identities=16%  Similarity=0.171  Sum_probs=102.1

Q ss_pred             EEEEecCCCCc---chhhHHHHHHHHhCCEEEEeCcccccccCCCcchhhHHhhHh-CCC-----eeecChhhHHHHHHH
Q 027097            2 LYIIGLGLGDE---RDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLY-GKP-----IALADREMVEEKADK   72 (228)
Q Consensus         2 l~iVG~GpG~~---~~lT~~A~~~L~~aDvV~~~~~~s~l~~~~~~~~~~~l~~~~-~~~-----i~~~~~~~~e~~~~~   72 (228)
                      ||+|++|+||.   ++||+||+++|++||+|+||+....      ..   .|..+- ..+     ....+.....+....
T Consensus         4 Lylv~tpiGnl~~~~~it~ra~~~l~~~d~i~~Edtr~~------~~---lL~~~~i~~~~~~~~~~~~~~~~~~~~~~~   74 (233)
T d1wyza1           4 LYLLPVTLGDTPLEQVLPSYNTEIIRGIRHFIVEDVRSA------RR---FLKKVDREIDIDSLTFYPLNKHTSPEDISG   74 (233)
T ss_dssp             EEEECCCSSSSCHHHHSCTHHHHHHTTCCEEEESCHHHH------HH---HHHHHCSSSCTTCCCCEECCSSCCHHHHHH
T ss_pred             EEEEcCCCCCCchhhhcCHHHHHHHHhCCEEEEEeCHHH------HH---HHHHcCCccccchhhhhhhhhhhhHHHhHH
Confidence            89999999995   7999999999999999999875321      22   444331 111     122222222333455


Q ss_pred             HHHHcCC-CcEEEEe-cCCCCCcccHHHHHHHHHhCCCcEEEECCCCHHhH-HHHhCCccccCCceeEEecccCCCCCCC
Q 027097           73 ILSESQE-SNVAFLV-VGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNA-VGICGLQLYRFGETVSIPFFTETWRPGS  149 (228)
Q Consensus        73 i~~~a~~-~~Va~l~-~GDP~~~~~~~~l~~~~~~~gi~v~viPGiSs~~a-~a~~Gl~l~~~~~~~~v~~~~~~~~p~~  149 (228)
                      +++.+.+ ++|++++ .|||++++++.++++.+.+.|++++++||+||+.+ ++.+|++.++|.-.-.+++...+..  .
T Consensus        75 i~~~l~~g~~v~lvsDaG~P~IsDPG~~lV~~~~~~gi~v~iiPG~SA~~aA~s~sG~~~~~~~f~gfl~~~~~~~~--~  152 (233)
T d1wyza1          75 YLKPLAGGASMGVISEAGCPAVADPGADVVAIAQRQKLKVIPLVGPSSIILSVMASGFNGQSFAFHGYLPIEPGERA--K  152 (233)
T ss_dssp             HHHHHHTTCCEEEECC-------CHHHHHHHHHHHTTCCEEECCCCCHHHHHHHHHTSCSSSEEEEEECCSSTTHHH--H
T ss_pred             HHHHHhcCCeEEEEeccccccccchhhhhhhhhhcccccccccccCcchheeeeeccccccccccceeeeeecCccc--c
Confidence            6666655 8999997 99999999999999999999999999999999886 4679999988754444433322211  1


Q ss_pred             hHHHHHHHhhcCCCeEEEEecc
Q 027097          150 FYEKIKRNRSLGLHTLCLLDIR  171 (228)
Q Consensus       150 ~~~~i~~~~~~g~~tlvlld~~  171 (228)
                      ....+.........|+++++..
T Consensus       153 ~~~~l~~~~~~~~~t~v~~e~~  174 (233)
T d1wyza1         153 KLKTLEQRVYAESQTQLFIETP  174 (233)
T ss_dssp             HHHHHHHHHHHHTCEEEEEECG
T ss_pred             hhhhhhhhhhccCceeEEEecc
Confidence            1223333334444677776544

>d1va0a1 c.90.1.1 (A:2-226) Hypothetical protein TTHA0667 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: Tetrapyrrole methylase
superfamily: Tetrapyrrole methylase
family: Tetrapyrrole methylase
domain: Hypothetical protein TTHA0667
species: Thermus thermophilus [TaxId: 274]

Probab=99.84  E-value=2.4e-20  Score=152.21  Aligned_cols=155  Identities=19%  Similarity=0.161  Sum_probs=99.7

Q ss_pred             EEEEecCCCCcchhhHHHHHHHHhCCEEEEeCcccccccCCCcchhhHHhhHhCC----CeeecChhhHHHHHHHHHHHc
Q 027097            2 LYIIGLGLGDERDITLRGLEAVKKCDKVYIEAYTSLLSFGLSTDGLSTLEKLYGK----PIALADREMVEEKADKILSES   77 (228)
Q Consensus         2 l~iVG~GpG~~~~lT~~A~~~L~~aDvV~~~~~~s~l~~~~~~~~~~~l~~~~~~----~i~~~~~~~~e~~~~~i~~~a   77 (228)
                      ||+||+|||||++||+||+++|++||+|+++.+.       ..+   .++.+...    ...........+..+.....+
T Consensus         3 l~~VGiGPGdpd~lTlkA~~~l~~aDvI~~~~~~-------~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   72 (225)
T d1va0a1           3 VYLVGAGPGDPELLTLKAYRLLKEAPVVLYDRLV-------DER---VLALAPGEKVYVGKEEGESEKQEEIHRLLLRHA   72 (225)
T ss_dssp             EEEEECBSSCGGGSBHHHHHHHHHCSEEEECTTS-------CHH---HHTTCCSEEEECCCCC----CHHHHHHHHHHHH
T ss_pred             EEEEecCCCChHHHHHHHHHHHHhCCEEEEEcCc-------CHH---HHHhccccceeeccccccchhHHHHHHHHHHHh
Confidence            8999999999999999999999999999986532       122   22211111    111111122333444444555


Q ss_pred             CC-CcEEEEecCCCCCcccHHHHHHHHHhCCCcEEEECCCCHHhHH-HHhCCccccCCceeEEecccCCCCCCChHHHHH
Q 027097           78 QE-SNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNAV-GICGLQLYRFGETVSIPFFTETWRPGSFYEKIK  155 (228)
Q Consensus        78 ~~-~~Va~l~~GDP~~~~~~~~l~~~~~~~gi~v~viPGiSs~~a~-a~~Gl~l~~~~~~~~v~~~~~~~~p~~~~~~i~  155 (228)
                      .+ ++++++..|||++++++..+.......++.++++||+||++++ ++.+.++........    +.+..+.  .....
T Consensus        73 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ipgiss~~~a~~~~~~~~~~~~~~~~----~~~~~~~--~~~~~  146 (225)
T d1va0a1          73 RAHPFVVRLKGGDPMVFGRGGEEVLFLLRHGVPVEVVPGVTSLLASGLPLTHRGLAHGFAAV----SGVLEGG--GYPDL  146 (225)
T ss_dssp             HTSSEEEEEESBCTTSSSSHHHHHHHHHHTTCCEEEECCCCGGGTTCCCSSBTTTBSEEEEE----ESSCGGG--CCCCC
T ss_pred             hccceEEEecCCcccccchhHHHHhhhccccceEEECCcccHHHHHhhccccCccccceeEE----EeecCCc--chhHH
Confidence            55 6778889999999999988888888899999999999999975 567877765432222    2222111  11122


Q ss_pred             HHhhcCCCeEEEEeccc
Q 027097          156 RNRSLGLHTLCLLDIRV  172 (228)
Q Consensus       156 ~~~~~g~~tlvlld~~~  172 (228)
                      +.+.....+++++....
T Consensus       147 ~~~~~~~~~~~~~~~~~  163 (225)
T d1va0a1         147 RPFARVPTLVVLMGVGR  163 (225)
T ss_dssp             TTTTTCSSEEEESCSTT
T ss_pred             HHHhhcccceeeecccc
Confidence            34555666666665543