Citrus Sinensis ID: 027290

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-----
MLRSVYMLMLFQLAYHLDVKAAKKAILDGFRKTDESLLQESVSGGWQDGATAVCIWILGRTVFVANIGDAKAVVARSSIVDGSNNHLDELSSLKAIVVTRVHKAIYPQERARIQKSGGTVSSNGRLQGRLEVSRAFGDRQFKKFGVVATPDIHSFEVTERDHFIILGCDGLWGVFGPSDAVEFVQKLLKEGLSVTAVSRRLVREAVLERRCKDNCTAIVIIFRHK
cHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHccccccccEEEEEEEEccEEEEEEccccEEEEEcccccccccccccccccccccccccccccccHHHHHHHHHcccEEEEccccccHHHHHHHccccccccccccccccEEEEEcccccEEEEEEcccccccccHHHHHHHHHHHHHccccHHHHHHHHHHHHHHccccccccEEEEEEEccc
ccHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHcccccccccEEEEEEEEccEEEEEEcccccEEEEEcccEEccccccccccccEEEEcccccccccHHHHHHHHHcccEEEEccEEccEEEEHHHcccHHHccccEcccccEEEEEEccccEEEEEEccccccccccHHHHHHHHHHHHccccHHHHHHHHHHHHHHcccccccEEEEEEEEccc
MLRSVYMLMLFQLAYHLDVKAAKKAILDGFRKTDESLLQEsvsggwqdgaTAVCIWILGRTVFVANIGDAKAVVARSsivdgsnnhldelSSLKAIVVTRVHKAIYPQERARIQksggtvssngrlqgrlevsrafgdrqfkkfgvvatpdihsfevterdhFIILgcdglwgvfgpsDAVEFVQKLLKEGLSVTAVSRRLVREAVLERRCKDNCTAIVIIFRHK
MLRSVYMLMLFQLAYHLDVKAAKKAILDGFRKTDESLLQEsvsggwqdGATAVCIWILGRTVFVANIGDAKAVVARSSivdgsnnhldelsslkaivVTRVHKAIypqerariqksggtvssngrlqGRLEVSRAFGDRQFKKFGVVATPDIHSFEVTERDHFIILGCDGLWGVFGPSDAVEFVQKLLkeglsvtavsrrlvreavlerrckdnctaIVIIFRHK
MLRSVYMLMLFQLAYHLDVKAAKKAILDGFRKTDESLLQESVSGGWQDGATAVCIWILGRTVFVANIGDAKAVVARSSIVDGSNNHLDELSSLKAIVVTRVHKAIYPQERARIQKSGGTVSSNGRLQGRLEVSRAFGDRQFKKFGVVATPDIHSFEVTERDHFIILGCDGLWGVFGPSDAVEFVQKLLKEGLSVTavsrrlvreavlerrCKDNCTAIVIIFRHK
***SVYMLMLFQLAYHLDVKAAKKAILDGFRKTDESLLQESVSGGWQDGATAVCIWILGRTVFVANIGDAKAVVARSSIVDGSNNHLDELSSLKAIVVTRVHKAIYPQ*********************LEVSRAFGDRQFKKFGVVATPDIHSFEVTERDHFIILGCDGLWGVFGPSDAVEFVQKLLKEGLSVTAVSRRLVREAVLERRCKDNCTAIVIIFR**
**RSVYMLMLFQLA**LD*KAAKKAILDGFRKTDESLLQES***GWQDGATAVCIWILGRTVFVANIGDAKAVVARSSIVDGSNNHLDELSSLKAIVVTRVHKAIYPQERARIQKSGGTVSSNGRLQGRLEVSRAFGDRQFKKFGVVATPDIHSFEVTERDHFIILGCDGLWGVFGPSDAVEFVQKLLKEGLSVTAVSRRLVREAVLERRCKDNCTAIVIIFRHK
MLRSVYMLMLFQLAYHLDVKAAKKAILDGFRKTDESLLQESVSGGWQDGATAVCIWILGRTVFVANIGDAKAVVARSSIVDGSNNHLDELSSLKAIVVTRVHKAIYPQERARIQKSGGTVSSNGRLQGRLEVSRAFGDRQFKKFGVVATPDIHSFEVTERDHFIILGCDGLWGVFGPSDAVEFVQKLLKEGLSVTAVSRRLVREAVLERRCKDNCTAIVIIFRHK
*LRSVYMLMLFQLAYHLDVKAAKKAILDGFRKTDESLLQESVSGGWQDGATAVCIWILGRTVFVANIGDAKAVVARSSIVDGSNNHLDELSSLKAIVVTRVHKAIYPQERARIQKSGGTVSSNGRLQGRLEVSRAFGDRQFKKFGVVATPDIHSFEVTERDHFIILGCDGLWGVFGPSDAVEFVQKLLKEGLSVTAVSRRLVREAVLERRCKDNCTAIVIIFRH*
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MLRSVYMLMLFQLAYHLDVKAAKKAILDGFRKTDESLLQESVSGGWQDGATAVCIWILGRTVFVANIGDAKAVVARSSIVDGSNNHLDELSSLKAIVVTRVHKAIYPQERARIQKSGGTVSSNGRLQGRLEVSRAFGDRQFKKFGVVATPDIHSFEVTERDHFIILGCDGLWGVFGPSDAVEFVQKLLKEGLSVTAVSRRLVREAVLERRCKDNCTAIVIIFRHK
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query225 2.2.26 [Sep-21-2011]
Q9LMT1351 Probable protein phosphat yes no 0.92 0.589 0.797 4e-94
Q0J2R1367 Probable protein phosphat yes no 0.924 0.566 0.735 3e-89
Q9H0C8392 Integrin-linked kinase-as yes no 0.862 0.494 0.369 4e-33
Q0IIF0370 Integrin-linked kinase-as yes no 0.844 0.513 0.372 5e-33
Q9Z1Z6392 Integrin-linked kinase-as yes no 0.862 0.494 0.365 2e-32
Q8R0F6392 Integrin-linked kinase-as yes no 0.862 0.494 0.365 2e-32
Q9SLA1392 Probable protein phosphat no no 0.826 0.474 0.359 2e-27
Q6L5C4491 Probable protein phosphat no no 0.804 0.368 0.367 6e-24
Q8LAY8354 Probable protein phosphat no no 0.813 0.516 0.368 6e-24
Q0JL75377 Probable protein phosphat no no 0.804 0.480 0.357 9e-24
>sp|Q9LMT1|P2C08_ARATH Probable protein phosphatase 2C 8 OS=Arabidopsis thaliana GN=At1g18030 PE=2 SV=2 Back     alignment and function desciption
 Score =  343 bits (881), Expect = 4e-94,   Method: Compositional matrix adjust.
 Identities = 165/207 (79%), Positives = 185/207 (89%)

Query: 17  LDVKAAKKAILDGFRKTDESLLQESVSGGWQDGATAVCIWILGRTVFVANIGDAKAVVAR 76
           LDVK AKKAIL+GFRKTDE LLQ+SVSGGWQDGATAVC+WIL + VFVANIGDAKAV+AR
Sbjct: 143 LDVKVAKKAILEGFRKTDELLLQKSVSGGWQDGATAVCVWILDQKVFVANIGDAKAVLAR 202

Query: 77  SSIVDGSNNHLDELSSLKAIVVTRVHKAIYPQERARIQKSGGTVSSNGRLQGRLEVSRAF 136
           SS  +   NH +  + LKAIV+TR HKAIYPQER+RIQKSGG +SSNGRLQGRLEVSRAF
Sbjct: 203 SSTTNELGNHTEAGNPLKAIVLTREHKAIYPQERSRIQKSGGVISSNGRLQGRLEVSRAF 262

Query: 137 GDRQFKKFGVVATPDIHSFEVTERDHFIILGCDGLWGVFGPSDAVEFVQKLLKEGLSVTA 196
           GDR FKKFGV ATPDIH+FE+TER++F+ILGCDGLW VFGPSDAV FVQKLLKEGL V+ 
Sbjct: 263 GDRHFKKFGVSATPDIHAFELTERENFMILGCDGLWEVFGPSDAVGFVQKLLKEGLHVST 322

Query: 197 VSRRLVREAVLERRCKDNCTAIVIIFR 223
           VSRRLV+EAV ERRCKDNCTAIVI+F+
Sbjct: 323 VSRRLVKEAVKERRCKDNCTAIVIVFK 349

Arabidopsis thaliana (taxid: 3702)
EC: 3EC: .EC: 1EC: .EC: 3EC: .EC: 1EC: 6
>sp|Q0J2R1|P2C67_ORYSJ Probable protein phosphatase 2C 67 OS=Oryza sativa subsp. japonica GN=Os09g0314400 PE=2 SV=1 Back     alignment and function description
>sp|Q9H0C8|ILKAP_HUMAN Integrin-linked kinase-associated serine/threonine phosphatase 2C OS=Homo sapiens GN=ILKAP PE=1 SV=1 Back     alignment and function description
>sp|Q0IIF0|ILKAP_BOVIN Integrin-linked kinase-associated serine/threonine phosphatase 2C OS=Bos taurus GN=ILKAP PE=2 SV=1 Back     alignment and function description
>sp|Q9Z1Z6|ILKAP_RAT Integrin-linked kinase-associated serine/threonine phosphatase 2C OS=Rattus norvegicus GN=Ilkap PE=2 SV=1 Back     alignment and function description
>sp|Q8R0F6|ILKAP_MOUSE Integrin-linked kinase-associated serine/threonine phosphatase 2C OS=Mus musculus GN=Ilkap PE=2 SV=1 Back     alignment and function description
>sp|Q9SLA1|P2C22_ARATH Probable protein phosphatase 2C 22 OS=Arabidopsis thaliana GN=At2g25620 PE=1 SV=1 Back     alignment and function description
>sp|Q6L5C4|P2C52_ORYSJ Probable protein phosphatase 2C 52 OS=Oryza sativa subsp. japonica GN=Os05g0587100 PE=2 SV=1 Back     alignment and function description
>sp|Q8LAY8|P2C69_ARATH Probable protein phosphatase 2C 69 OS=Arabidopsis thaliana GN=At5g10740 PE=2 SV=1 Back     alignment and function description
>sp|Q0JL75|P2C07_ORYSJ Probable protein phosphatase 2C 7 OS=Oryza sativa subsp. japonica GN=Os01g0618200 PE=2 SV=2 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query225
224133162266 predicted protein [Populus trichocarpa] 0.924 0.781 0.870 1e-104
225456039 378 PREDICTED: probable protein phosphatase 0.928 0.552 0.842 1e-100
388493824225 unknown [Lotus japonicus] 0.991 0.991 0.771 2e-98
357500133225 hypothetical protein MTR_6g081850 [Medic 0.995 0.995 0.767 2e-98
449497544 348 PREDICTED: probable protein phosphatase 0.928 0.600 0.818 1e-97
449439101 348 PREDICTED: probable protein phosphatase 0.928 0.600 0.813 6e-97
357500131321 hypothetical protein MTR_6g081850 [Medic 0.924 0.647 0.798 3e-95
297844754 341 hypothetical protein ARALYDRAFT_312763 [ 0.92 0.607 0.797 3e-93
18394565 351 putative protein phosphatase 2C 8 [Arabi 0.92 0.589 0.797 2e-92
16226856 351 At1g18030/T10F20_3 [Arabidopsis thaliana 0.92 0.589 0.797 2e-92
>gi|224133162|ref|XP_002321498.1| predicted protein [Populus trichocarpa] gi|222868494|gb|EEF05625.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
 Score =  382 bits (980), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 181/208 (87%), Positives = 199/208 (95%)

Query: 17  LDVKAAKKAILDGFRKTDESLLQESVSGGWQDGATAVCIWILGRTVFVANIGDAKAVVAR 76
           LDVKAAKKAILDGFRKTDESLLQES SGGWQDGATAVC+W+LG+ VF+ANIGDAKAV+AR
Sbjct: 58  LDVKAAKKAILDGFRKTDESLLQESTSGGWQDGATAVCVWVLGQKVFIANIGDAKAVLAR 117

Query: 77  SSIVDGSNNHLDELSSLKAIVVTRVHKAIYPQERARIQKSGGTVSSNGRLQGRLEVSRAF 136
           SSI+DGS NH D +S LKAIV+TR HKAIYPQERARIQK+GG+VSSNGRLQGRLEVSRAF
Sbjct: 118 SSIIDGSQNHPDGVSPLKAIVLTREHKAIYPQERARIQKAGGSVSSNGRLQGRLEVSRAF 177

Query: 137 GDRQFKKFGVVATPDIHSFEVTERDHFIILGCDGLWGVFGPSDAVEFVQKLLKEGLSVTA 196
           GDRQFKK GVVATPDIHSF++T+R+HFIILGCDGLWGVFGPSDAVEFVQKLLKEGL+V A
Sbjct: 178 GDRQFKKVGVVATPDIHSFDLTDREHFIILGCDGLWGVFGPSDAVEFVQKLLKEGLTVAA 237

Query: 197 VSRRLVREAVLERRCKDNCTAIVIIFRH 224
           VSRRLVREAVLERRCKDNCTAI+I+F+H
Sbjct: 238 VSRRLVREAVLERRCKDNCTAIIIVFKH 265

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|225456039|ref|XP_002277457.1| PREDICTED: probable protein phosphatase 2C 8 [Vitis vinifera] gi|297734261|emb|CBI15508.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|388493824|gb|AFK34978.1| unknown [Lotus japonicus] Back     alignment and taxonomy information
>gi|357500133|ref|XP_003620355.1| hypothetical protein MTR_6g081850 [Medicago truncatula] gi|355495370|gb|AES76573.1| hypothetical protein MTR_6g081850 [Medicago truncatula] Back     alignment and taxonomy information
>gi|449497544|ref|XP_004160432.1| PREDICTED: probable protein phosphatase 2C 8-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|449439101|ref|XP_004137326.1| PREDICTED: probable protein phosphatase 2C 8-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|357500131|ref|XP_003620354.1| hypothetical protein MTR_6g081850 [Medicago truncatula] gi|355495369|gb|AES76572.1| hypothetical protein MTR_6g081850 [Medicago truncatula] Back     alignment and taxonomy information
>gi|297844754|ref|XP_002890258.1| hypothetical protein ARALYDRAFT_312763 [Arabidopsis lyrata subsp. lyrata] gi|297336100|gb|EFH66517.1| hypothetical protein ARALYDRAFT_312763 [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|18394565|ref|NP_564045.1| putative protein phosphatase 2C 8 [Arabidopsis thaliana] gi|226739232|sp|Q9LMT1.2|P2C08_ARATH RecName: Full=Probable protein phosphatase 2C 8; Short=AtPP2C08 gi|109946401|gb|ABG48379.1| At1g18030 [Arabidopsis thaliana] gi|332191544|gb|AEE29665.1| putative protein phosphatase 2C 8 [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|16226856|gb|AAL16282.1|AF428352_1 At1g18030/T10F20_3 [Arabidopsis thaliana] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query225
TAIR|locus:2194035351 AT1G18030 [Arabidopsis thalian 0.92 0.589 0.739 3.8e-78
UNIPROTKB|Q0IIF0370 ILKAP "Integrin-linked kinase- 0.715 0.435 0.398 1.8e-30
UNIPROTKB|F1SIU8392 ILKAP "Uncharacterized protein 0.715 0.410 0.398 1.8e-30
UNIPROTKB|F1SJH8293 LOC100737148 "Uncharacterized 0.715 0.549 0.398 1.8e-30
UNIPROTKB|E1BYA9392 ILKAP "Uncharacterized protein 0.715 0.410 0.387 6.2e-30
UNIPROTKB|E2RS11393 ILKAP "Uncharacterized protein 0.715 0.409 0.393 7.9e-30
UNIPROTKB|Q9H0C8392 ILKAP "Integrin-linked kinase- 0.715 0.410 0.393 7.9e-30
MGI|MGI:1914694392 Ilkap "integrin-linked kinase- 0.715 0.410 0.393 7.9e-30
RGD|620128392 Ilkap "integrin-linked kinase- 0.715 0.410 0.393 7.9e-30
UNIPROTKB|Q9Z1Z6392 Ilkap "Integrin-linked kinase- 0.715 0.410 0.393 7.9e-30
TAIR|locus:2194035 AT1G18030 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 786 (281.7 bits), Expect = 3.8e-78, P = 3.8e-78
 Identities = 153/207 (73%), Positives = 172/207 (83%)

Query:    17 LDVKAAKKAILDGFRKTDESLLQESVSGGWQDGATAVCIWILGRTVFVANIGDAKAVVAR 76
             LDVK AKKAIL+GFRKTDE LLQ+SVSGGWQDGATAVC+WIL + VFVANIGDAKAV+AR
Sbjct:   143 LDVKVAKKAILEGFRKTDELLLQKSVSGGWQDGATAVCVWILDQKVFVANIGDAKAVLAR 202

Query:    77 SSIVDGSNNHLDELSSLKAIVVTRVHKAIYPQERARIQKSGGTVSSNGRLQGRLEVSRAF 136
             SS  +   NH +  + LKAIV+TR HKAIYPQER+RIQKSGG +SSNGRLQGRLEVSRAF
Sbjct:   203 SSTTNELGNHTEAGNPLKAIVLTREHKAIYPQERSRIQKSGGVISSNGRLQGRLEVSRAF 262

Query:   137 GDRQFKKFGVVATPDIHSFEVTERDHFIILGCDGLWGVFGPSDAVEFVQKLLKEGLSVTX 196
             GDR FKKFGV ATPDIH+FE+TER++F+ILGCDGLW VFGPSDAV FVQKLLKEGL V+ 
Sbjct:   263 GDRHFKKFGVSATPDIHAFELTERENFMILGCDGLWEVFGPSDAVGFVQKLLKEGLHVST 322

Query:   197 XXXXXXXXXXXXXXCKDNCTAIVIIFR 223
                           CKDNCTAIVI+F+
Sbjct:   323 VSRRLVKEAVKERRCKDNCTAIVIVFK 349
GO:0003824 "catalytic activity" evidence=IEA
GO:0004722 "protein serine/threonine phosphatase activity" evidence=ISS
GO:0005737 "cytoplasm" evidence=ISM
UNIPROTKB|Q0IIF0 ILKAP "Integrin-linked kinase-associated serine/threonine phosphatase 2C" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
UNIPROTKB|F1SIU8 ILKAP "Uncharacterized protein" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms
UNIPROTKB|F1SJH8 LOC100737148 "Uncharacterized protein" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms
UNIPROTKB|E1BYA9 ILKAP "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
UNIPROTKB|E2RS11 ILKAP "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
UNIPROTKB|Q9H0C8 ILKAP "Integrin-linked kinase-associated serine/threonine phosphatase 2C" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
MGI|MGI:1914694 Ilkap "integrin-linked kinase-associated serine/threonine phosphatase 2C" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
RGD|620128 Ilkap "integrin-linked kinase-associated serine/threonine phosphatase" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|Q9Z1Z6 Ilkap "Integrin-linked kinase-associated serine/threonine phosphatase 2C" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q9LMT1P2C08_ARATH3, ., 1, ., 3, ., 1, 60.79710.920.5897yesno
Q0J2R1P2C67_ORYSJ3, ., 1, ., 3, ., 1, 60.73550.92440.5667yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer3.1.3LOW CONFIDENCE prediction!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query225
cd00143254 cd00143, PP2Cc, Serine/threonine phosphatases, fam 2e-52
smart00332252 smart00332, PP2Cc, Serine/threonine phosphatases, 3e-46
pfam00481252 pfam00481, PP2C, Protein phosphatase 2C 1e-43
PLN03145365 PLN03145, PLN03145, Protein phosphatase 2c; Provis 3e-33
PTZ00224 381 PTZ00224, PTZ00224, protein phosphatase 2C; Provis 2e-23
COG0631262 COG0631, PTC1, Serine/threonine protein phosphatas 8e-18
>gnl|CDD|238083 cd00143, PP2Cc, Serine/threonine phosphatases, family 2C, catalytic domain; The protein architecture and deduced catalytic mechanism of PP2C phosphatases are similar to the PP1, PP2A, PP2B family of protein Ser/Thr phosphatases, with which PP2C shares no sequence similarity Back     alignment and domain information 
 Score =  169 bits (430), Expect = 2e-52
 Identities = 74/215 (34%), Positives = 114/215 (53%), Gaps = 21/215 (9%)

Query: 10  LFQLAYHLDVKAAKKAILDGFRKTDESLLQESVS--GGWQDGATAVCIWILGRTVFVANI 67
             +    L  +  ++A+   F + DE +L+E+       + G TAV   I G  ++VAN+
Sbjct: 59  ELEETLTLSEEDIEEALRKAFLRADEEILEEAQDEPDDARSGTTAVVALIRGNKLYVANV 118

Query: 68  GDAKAVVARSSIVDGSNNHLDELSSLKAIVVTRVHKAIYPQERARIQKSGGTVSSNGRLQ 127
           GD++AV+ R+                +A+ +T+ HK +  +ER RI+K+GG VS NGR+ 
Sbjct: 119 GDSRAVLCRNG---------------EAVQLTKDHKPVNEEERERIEKAGGRVS-NGRVP 162

Query: 128 GRLEVSRAFGDRQFKKFGVVATPDIHSFEVTERDHFIILGCDGLWGVFGPSDAVEFVQKL 187
           G L V+RA GD   K  GV A PD+   ++TE D F+IL  DGLW V    +AV+ V+  
Sbjct: 163 GVLAVTRALGDFDLK-PGVSAEPDVTVVKLTEDDDFLILASDGLWDVLSNQEAVDIVRSE 221

Query: 188 LKEGLSVTAVSRRLVREAVLERRCKDNCTAIVIIF 222
           L +   +   ++ LV  A L R   DN T +V+  
Sbjct: 222 LAKE-DLQEAAQELVDLA-LRRGSHDNITVVVVRL 254

Length = 254
>gnl|CDD|214625 smart00332, PP2Cc, Serine/threonine phosphatases, family 2C, catalytic domain Back     alignment and domain information
>gnl|CDD|215938 pfam00481, PP2C, Protein phosphatase 2C Back     alignment and domain information
>gnl|CDD|215603 PLN03145, PLN03145, Protein phosphatase 2c; Provisional Back     alignment and domain information
>gnl|CDD|240318 PTZ00224, PTZ00224, protein phosphatase 2C; Provisional Back     alignment and domain information
>gnl|CDD|223704 COG0631, PTC1, Serine/threonine protein phosphatase [Signal transduction mechanisms] Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 225
PLN03145365 Protein phosphatase 2c; Provisional 100.0
KOG0698330 consensus Serine/threonine protein phosphatase [Si 100.0
KOG0697379 consensus Protein phosphatase 1B (formerly 2C) [Si 100.0
PF00481254 PP2C: Protein phosphatase 2C; InterPro: IPR001932 100.0
PTZ00224 381 protein phosphatase 2C; Provisional 100.0
KOG0699542 consensus Serine/threonine protein phosphatase [Si 100.0
COG0631262 PTC1 Serine/threonine protein phosphatase [Signal 100.0
KOG0700390 consensus Protein phosphatase 2C/pyruvate dehydrog 100.0
smart00332255 PP2Cc Serine/threonine phosphatases, family 2C, ca 100.0
cd00143254 PP2Cc Serine/threonine phosphatases, family 2C, ca 100.0
PRK14559645 putative protein serine/threonine phosphatase; Pro 99.97
KOG1323493 consensus Serine/threonine phosphatase [Signal tra 99.95
KOG0618 1081 consensus Serine/threonine phosphatase 2C containi 99.85
KOG1379330 consensus Serine/threonine protein phosphatase [Si 99.8
smart00331193 PP2C_SIG Sigma factor PP2C-like phosphatases. 99.52
PF13672212 PP2C_2: Protein phosphatase 2C; PDB: 2JFT_A 2JFS_A 99.4
PF07228193 SpoIIE: Stage II sporulation protein E (SpoIIE); I 99.37
TIGR02865764 spore_II_E stage II sporulation protein E. Stage I 99.34
COG2208367 RsbU Serine phosphatase RsbU, regulator of sigma s 97.89
>PLN03145 Protein phosphatase 2c; Provisional Back     alignment and domain information 
Probab=100.00  E-value=2.2e-42  Score=300.20  Aligned_cols=188  Identities=37%  Similarity=0.671  Sum_probs=169.7

Q ss_pred             HHHHHHHHHHHHHHHHHHHhhhcCC-CCCCCceeEEEEEeCCeEEEEEcccCcEEEEeeccCCCCCCCCccccceeeEec
Q 027290           20 KAAKKAILDGFRKTDESLLQESVSG-GWQDGATAVCIWILGRTVFVANIGDAKAVVARSSIVDGSNNHLDELSSLKAIVV   98 (225)
Q Consensus        20 ~~~~~~l~~a~~~~~~~l~~~~~~~-~~~~GtT~~~~~i~~~~l~~anvGDSr~~l~~~~~~~~~~~~~~~~~~~~~~~l   98 (225)
                      ..+.++|.++|.++++.+.+....+ ...+|||++++++.++++|+||+||||+|+++++               ++++|
T Consensus       137 ~~~~~al~~af~~~d~~~~~~~~~~~~~~~GTTavv~li~~~~l~vaNvGDSRayl~r~g---------------~~~~L  201 (365)
T PLN03145        137 REIEKVVSSAFLQTDTAFAEACSLDASLASGTTALAALVVGRSLVVANAGDCRAVLCRRG---------------KAIEM  201 (365)
T ss_pred             hhHHHHHHHHHHHHhHHHHhhhccccCCCCcCcEEEEEEECCeEEEEecCCceEEEEcCC---------------eEEEe
Confidence            4678889999999999998765333 3458999999999999999999999999999999               99999


Q ss_pred             CCCCCCCCHHHHHHHHHcCCEEeeCCcccceeeeeccccCccCcCC------CcccCCceEEEEecCCCeEEEEecCCcc
Q 027290           99 TRVHKAIYPQERARIQKSGGTVSSNGRLQGRLEVSRAFGDRQFKKF------GVVATPDIHSFEVTERDHFIILGCDGLW  172 (225)
Q Consensus        99 t~DH~~~~~~e~~ri~~~g~~~~~~~r~~g~~~~sR~lGd~~~k~~------~v~~~p~i~~~~l~~~d~~lil~SDGl~  172 (225)
                      |+||+|.++.|++||.+.||.+. .++++|.+.+||+|||..+|..      +++++|++..+++.++|+||||||||||
T Consensus       202 T~DH~~~~~~E~~RI~~~Gg~v~-~g~v~g~l~vTRalGD~~~k~~k~~~~~~vs~ePdv~~~~l~~~D~fLILaSDGLw  280 (365)
T PLN03145        202 SRDHKPMCSKERKRIEASGGYVY-DGYLNGQLNVARALGDWHMEGMKGSDGGPLSAEPELMTTQLTEEDEFLIIGCDGIW  280 (365)
T ss_pred             cCCCCCCCHHHHHHHHHcCCcee-cceECCccccccccccccccccccccCCCcceEEEEEEEECCCCCEEEEEeCCccc
Confidence            99999999999999999999986 5788898999999999887642      4788999999999999999999999999


Q ss_pred             cccChHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHhCCCCCCcEEEEEEecC
Q 027290          173 GVFGPSDAVEFVQKLLKEGLSVTAVSRRLVREAVLERRCKDNCTAIVIIFRH  224 (225)
Q Consensus       173 d~l~~~ei~~~i~~~~~~~~~~~~~a~~L~~~a~~~~~~~DNiTvivi~~~~  224 (225)
                      |+|+++|+++++...+....+++.+|+.|+++|+ .+++.||+|||||+|+.
T Consensus       281 dvls~ee~v~~i~~~l~~~~~p~~aa~~Lv~~Al-~rgs~DNITvIVV~l~~  331 (365)
T PLN03145        281 DVFRSQNAVDFARRRLQEHNDPVMCSKELVDEAL-KRKSGDNLAVVVVCFQS  331 (365)
T ss_pred             cCcCHHHHHHHHHHHHhcCCCHHHHHHHHHHHHH-hCCCCCCEEEEEEEeec
Confidence            9999999999988877766689999999999997 79999999999999974

>KOG0698 consensus Serine/threonine protein phosphatase [Signal transduction mechanisms] Back     alignment and domain information
>KOG0697 consensus Protein phosphatase 1B (formerly 2C) [Signal transduction mechanisms] Back     alignment and domain information
>PF00481 PP2C: Protein phosphatase 2C; InterPro: IPR001932 This domain is found in protein phosphatase 2C, as well as other proteins eg Back     alignment and domain information
>PTZ00224 protein phosphatase 2C; Provisional Back     alignment and domain information
>KOG0699 consensus Serine/threonine protein phosphatase [Signal transduction mechanisms] Back     alignment and domain information
>COG0631 PTC1 Serine/threonine protein phosphatase [Signal transduction mechanisms] Back     alignment and domain information
>KOG0700 consensus Protein phosphatase 2C/pyruvate dehydrogenase (lipoamide) phosphatase [Signal transduction mechanisms] Back     alignment and domain information
>smart00332 PP2Cc Serine/threonine phosphatases, family 2C, catalytic domain Back     alignment and domain information
>cd00143 PP2Cc Serine/threonine phosphatases, family 2C, catalytic domain; The protein architecture and deduced catalytic mechanism of PP2C phosphatases are similar to the PP1, PP2A, PP2B family of protein Ser/Thr phosphatases, with which PP2C shares no sequence similarity Back     alignment and domain information
>PRK14559 putative protein serine/threonine phosphatase; Provisional Back     alignment and domain information
>KOG1323 consensus Serine/threonine phosphatase [Signal transduction mechanisms] Back     alignment and domain information
>KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms] Back     alignment and domain information
>KOG1379 consensus Serine/threonine protein phosphatase [Signal transduction mechanisms] Back     alignment and domain information
>smart00331 PP2C_SIG Sigma factor PP2C-like phosphatases Back     alignment and domain information
>PF13672 PP2C_2: Protein phosphatase 2C; PDB: 2JFT_A 2JFS_A 2V06_A 2JFR_A 2J86_A 2J82_A 2Y09_A 2XZV_A 2CM1_A 1TXO_B Back     alignment and domain information
>PF07228 SpoIIE: Stage II sporulation protein E (SpoIIE); InterPro: IPR001932 This domain is found in protein phosphatase 2C, as well as other proteins eg Back     alignment and domain information
>TIGR02865 spore_II_E stage II sporulation protein E Back     alignment and domain information
>COG2208 RsbU Serine phosphatase RsbU, regulator of sigma subunit [Signal transduction mechanisms / Transcription] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query225
2i0o_A304 Crystal Structure Of Anopheles Gambiae SerTHR PHOSP 4e-19
3fxj_A390 Crystal Structure Of Human Protein Phosphatase 1a ( 7e-18
1a6q_A382 Crystal Structure Of The Protein SerineTHREONINE PH 8e-18
2p8e_A307 Crystal Structure Of The SerineTHREONINE PHOSPHATAS 3e-17
3nmn_B319 Crystal Structure Of Pyrabactin-Bound Abscisic Acid 5e-13
3jrq_A326 Crystal Structure Of (+)-aba-bound Pyl1 In Complex 6e-13
3kdj_B316 Complex Structure Of (+)-Aba-Bound Pyl1 And Abi1 Le 6e-13
3nmv_B324 Crystal Structure Of Pyrabactin-Bound Abscisic Acid 6e-12
2i44_A324 Crystal Structure Of Serine-Threonine Phosphatase 2 3e-11
4ds8_B343 Complex Structure Of Abscisic Acid Receptor Pyl3-(+ 1e-10
3ujg_B350 Crystal Structure Of Snrk2.6 In Complex With Hab1 L 1e-10
3kb3_B321 Crystal Structure Of Abscisic Acid-Bound Pyl2 In Co 1e-10
3nmt_B341 Crystal Structure Of Pyrabactin Bound Abscisic Acid 1e-10
3qn1_B337 Crystal Structure Of The Pyr1 Abscisic Acid Recepto 1e-10
3rt0_A340 Crystal Structure Of Pyl10-Hab1 Complex In The Abse 2e-10
4da1_A389 Crystal Structure Of Branched-Chain Alpha-Ketoacid 1e-07
2iq1_A274 Crystal Structure Of Human Ppm1k Length = 274 1e-07
2isn_A364 Crystal Structure Of A Phosphatase From A Pathogeni 9e-07
2pnq_A467 Crystal Structure Of Pyruvate Dehydrogenase Phospha 2e-06
3mq3_A467 Crystal Structure Of Native Bovine Pdp1c Length = 4 2e-06
>pdb|2I0O|A Chain A, Crystal Structure Of Anopheles Gambiae SerTHR PHOSPHATASE COMPLEXED With Zn2+ Length = 304 Back     alignment and structure 
Iteration: 1

 Score = 91.3 bits (225), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 72/235 (30%), Positives = 107/235 (45%), Gaps = 47/235 (20%)
Query: 20  KAAKKAILDGFRKTDESLLQESV-------SG---------GWQDGATAVCIWILGRTVF 63
           K  +KA+ + F   D +LLQE V       SG         G   G TAV   + G+ ++
Sbjct: 86  KEFEKALKEAFLGFDATLLQEKVIEELKVLSGDSAGSDAEPGKDSGCTAVVALLHGKDLY 145
Query: 64  VANIGDAKAVVARSSIVDGSNNHLDELSSLKAIVVTRVHKAIYPQERARIQKSGGTVSSN 123
           VAN GD++ VV R+                KA+ ++  HK     E  RI+K+GG V+ +
Sbjct: 146 VANAGDSRCVVCRNG---------------KALEMSFDHKPEDTVEYQRIEKAGGRVTLD 190
Query: 124 GRLQGRLEVSRAFGDRQFK--------KFGVVATPDIHSFEVTERDHFIILGCDGLWGVF 175
           GR+ G L +SRA GD  +K        +  + A PDI    V   D F++L CDG+W   
Sbjct: 191 GRVNGGLNLSRAIGDHGYKMNKSLPAEEQMISALPDIEKITVGPEDEFMVLACDGIWNFM 250
Query: 176 GPSDAVEFVQ-KLLKEGLSVTXXXXX------XXXXXXXXXXCKDNCTAIVIIFR 223
                V+FVQ ++ K G+ ++                     C DN TAI++ F+
Sbjct: 251 TSEQVVQFVQERINKPGMKLSKICEELFDHCLAPHTRGDGTGC-DNMTAIIVQFK 304
>pdb|3FXJ|A Chain A, Crystal Structure Of Human Protein Phosphatase 1a (Ppm1a) Bound With Phosphate At 3 Mm Of Mn2+ Length = 390 Back     alignment and structure
>pdb|1A6Q|A Chain A, Crystal Structure Of The Protein SerineTHREONINE PHOSPHATASE 2C AT 2 A Resolution Length = 382 Back     alignment and structure
>pdb|2P8E|A Chain A, Crystal Structure Of The SerineTHREONINE PHOSPHATASE Domain Of Human Ppm1b Length = 307 Back     alignment and structure
>pdb|3NMN|B Chain B, Crystal Structure Of Pyrabactin-Bound Abscisic Acid Receptor Pyl1 In Complex With Type 2c Protein Phosphatase Abi1 Length = 319 Back     alignment and structure
>pdb|3JRQ|A Chain A, Crystal Structure Of (+)-aba-bound Pyl1 In Complex With Abi1 Length = 326 Back     alignment and structure
>pdb|3KDJ|B Chain B, Complex Structure Of (+)-Aba-Bound Pyl1 And Abi1 Length = 316 Back     alignment and structure
>pdb|3NMV|B Chain B, Crystal Structure Of Pyrabactin-Bound Abscisic Acid Receptor Pyl2 Mutant A93f In Complex With Type 2c Protein Phosphatase Abi2 Length = 324 Back     alignment and structure
>pdb|2I44|A Chain A, Crystal Structure Of Serine-Threonine Phosphatase 2c From Toxoplasma Gondii Length = 324 Back     alignment and structure
>pdb|4DS8|B Chain B, Complex Structure Of Abscisic Acid Receptor Pyl3-(+)-Aba-Hab1 In The Presence Of Mn2+ Length = 343 Back     alignment and structure
>pdb|3UJG|B Chain B, Crystal Structure Of Snrk2.6 In Complex With Hab1 Length = 350 Back     alignment and structure
>pdb|3KB3|B Chain B, Crystal Structure Of Abscisic Acid-Bound Pyl2 In Complex With Hab1 Length = 321 Back     alignment and structure
>pdb|3NMT|B Chain B, Crystal Structure Of Pyrabactin Bound Abscisic Acid Receptor Pyl2 Mutant A93f In Complex With Type 2c Protein Phosphatase Hab1 Length = 341 Back     alignment and structure
>pdb|3QN1|B Chain B, Crystal Structure Of The Pyr1 Abscisic Acid Receptor In Complex With The Hab1 Type 2c Phosphatase Catalytic Domain Length = 337 Back     alignment and structure
>pdb|3RT0|A Chain A, Crystal Structure Of Pyl10-Hab1 Complex In The Absence Of Abscisic Acid (Aba) Length = 340 Back     alignment and structure
>pdb|4DA1|A Chain A, Crystal Structure Of Branched-Chain Alpha-Ketoacid Dehydrogenase Phosphatase With Mg (Ii) Ions At The Active Site Length = 389 Back     alignment and structure
>pdb|2IQ1|A Chain A, Crystal Structure Of Human Ppm1k Length = 274 Back     alignment and structure
>pdb|2ISN|A Chain A, Crystal Structure Of A Phosphatase From A Pathogenic Strain Toxoplasma Gondii Length = 364 Back     alignment and structure
>pdb|2PNQ|A Chain A, Crystal Structure Of Pyruvate Dehydrogenase Phosphatase 1 (Pdp1) Length = 467 Back     alignment and structure
>pdb|3MQ3|A Chain A, Crystal Structure Of Native Bovine Pdp1c Length = 467 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query225
2p8e_A307 PPM1B beta isoform variant 6; structural genomics, 1e-58
4da1_A389 Protein phosphatase 1K, mitochondrial; metal-ION-a 1e-58
2iq1_A274 Protein phosphatase 2C kappa, PPM1K; structural ge 2e-58
2i44_A324 Serine-threonine phosphatase 2C; PSI-2, 8817Z, str 5e-58
1a6q_A382 Phosphatase 2C; catalytic mechanism, metalloenzyme 6e-58
2i0o_A304 Ser/Thr phosphatase; beta sandwich, structural gen 4e-57
3kdj_B316 Protein phosphatase 2C 56; ABA, PYL1, abscisic aci 7e-57
3qn1_B337 Protein phosphatase 2C 16; start domain, BET V dom 9e-50
2irm_A358 Mitogen-activated protein kinase kinase kinase 7 i 2e-42
3d8k_A377 PP2C, protein phosphatase 2C; nysgrc, PSI-II, STR 2e-42
2isn_A364 NYSGXRC-8828Z, phosphatase; pathogenic strain, pra 4e-42
2j4o_A401 Mitogen-activated protein kinase kinase kinase 7-i 1e-34
2pnq_A467 [pyruvate dehydrogenase [lipoamide]]-phosphatase 1 9e-32
2pk0_A250 Serine/threonine protein phosphatase STP1; SI moti 1e-07
1txo_A237 Putative bacterial enzyme; serine/threonine protei 3e-05
>2p8e_A PPM1B beta isoform variant 6; structural genomics, hydrolase, PSI-2, protein structure initiative; 1.82A {Homo sapiens} Length = 307 Back     alignment and structure
 Score =  186 bits (474), Expect = 1e-58
 Identities = 62/213 (29%), Positives = 101/213 (47%), Gaps = 27/213 (12%)

Query: 23  KKAILDGFRKTDESLLQ--ESVSGGWQDGATAVCIWILGRTVFVANIGDAKAVVARSSIV 80
           K  I  GF K DE +    +  +G  + G+TAV + I  + ++  N GD++AV+ R+   
Sbjct: 105 KNGIRTGFLKIDEYMRNFSDLRNGMDRSGSTAVGVMISPKHIYFINCGDSRAVLYRNG-- 162

Query: 81  DGSNNHLDELSSLKAIVVTRVHKAIYPQERARIQKSGGTVSSNGRLQGRLEVSRAFGDRQ 140
                        +    T+ HK   P+E+ RIQ +GG+V    R+ G L VSRA GD  
Sbjct: 163 -------------QVCFSTQDHKPCNPREKERIQNAGGSVM-IQRVNGSLAVSRALGDYD 208

Query: 141 FKKFG--------VVATPDIHSFEVTERDHFIILGCDGLWGVFGPSDAVEFVQKLLKEGL 192
           +K           V   P+++     E D FIIL CDG+W V    +  E+V+  L+   
Sbjct: 209 YKCVDGKGPTEQLVSPEPEVYEILRAEEDEFIILACDGIWDVMSNEELCEYVKSRLEVSD 268

Query: 193 SVTAVSRRLVREAVLERRCKDNCTAIVIIFRHK 225
            +  V   +V    L +  +DN + +++ F ++
Sbjct: 269 DLENVCNWVVDTC-LHKGSRDNMSIVLVCFSNE 300
>4da1_A Protein phosphatase 1K, mitochondrial; metal-ION-assisted catalysis, dehydrogenase phosphatase, hydrolase; 2.38A {Homo sapiens} PDB: 3qht_A 1l2n_A Length = 389 Back     alignment and structure
>2iq1_A Protein phosphatase 2C kappa, PPM1K; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.25A {Homo sapiens} Length = 274 Back     alignment and structure
>2i44_A Serine-threonine phosphatase 2C; PSI-2, 8817Z, structural genomics, protein structure initiative; 2.04A {Toxoplasma gondii} Length = 324 Back     alignment and structure
>1a6q_A Phosphatase 2C; catalytic mechanism, metalloenzyme, transductuin, hydrolase; 2.00A {Homo sapiens} SCOP: a.159.1.1 d.219.1.1 PDB: 3fxk_A 3fxj_A 3fxl_A* 3fxm_A* 3fxo_A Length = 382 Back     alignment and structure
>2i0o_A Ser/Thr phosphatase; beta sandwich, structural genomics, PSI, protei structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Anopheles gambiae} Length = 304 Back     alignment and structure
>3kdj_B Protein phosphatase 2C 56; ABA, PYL1, abscisic acid signaling pathway, cell membr hydrolase, magnesium, manganese, metal-binding, nucleus; HET: A8S; 1.88A {Arabidopsis thaliana} PDB: 3nmn_B* 3jrq_A* 3ujk_A 3nmv_B 3ujl_B* Length = 316 Back     alignment and structure
>3qn1_B Protein phosphatase 2C 16; start domain, BET V domain, PYR/PYL/RCAR, PP2C, abscisic ACI receptor, type 2C protein phosphatase; HET: A8S; 1.80A {Arabidopsis thaliana} PDB: 3ujg_B 3nmt_B* 3rt0_A 3kb3_B* Length = 337 Back     alignment and structure
>2irm_A Mitogen-activated protein kinase kinase kinase 7 interacting protein 1; TAK1-binding protein, TAB1; 3.00A {Anopheles gambiae} Length = 358 Back     alignment and structure
>3d8k_A PP2C, protein phosphatase 2C; nysgrc, PSI-II, STR genomics, protein structure initiative, NEW YORK structural research consortium, nysgxrc; 2.71A {Toxoplasma gondii} Length = 377 Back     alignment and structure
>2isn_A NYSGXRC-8828Z, phosphatase; pathogenic strain, praseodymium, sulfate structural genomics, PSI-2, protein structure initiative; 1.90A {Toxoplasma gondii} Length = 364 Back     alignment and structure
>2j4o_A Mitogen-activated protein kinase kinase kinase 7-interacting protein 1; TGF-beta, pseudo-phosphatase, TAK1 binding protein, protein binding; 2.25A {Homo sapiens} PDB: 2pom_A 2pop_A Length = 401 Back     alignment and structure
>2pnq_A [pyruvate dehydrogenase [lipoamide]]-phosphatase 1; pyruvate dehydrogenase phosphatase 1, catalytic subunit, PDP1C, hydrolase; 1.81A {Rattus norvegicus} PDB: 3n3c_A 3mq3_A Length = 467 Back     alignment and structure
>2pk0_A Serine/threonine protein phosphatase STP1; SI motif, signaling protein; 2.65A {Streptococcus agalactiae} Length = 250 Back     alignment and structure
>1txo_A Putative bacterial enzyme; serine/threonine protein phosphatases, PSTP/PPP, structural genomics, PSI, protein structure initiative; 1.95A {Mycobacterium tuberculosis} SCOP: d.219.1.1 PDB: 2cm1_A Length = 237 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query225
2p8e_A307 PPM1B beta isoform variant 6; structural genomics, 100.0
2i0o_A304 Ser/Thr phosphatase; beta sandwich, structural gen 100.0
1a6q_A382 Phosphatase 2C; catalytic mechanism, metalloenzyme 100.0
3qn1_B337 Protein phosphatase 2C 16; start domain, BET V dom 100.0
2iq1_A274 Protein phosphatase 2C kappa, PPM1K; structural ge 100.0
2irm_A358 Mitogen-activated protein kinase kinase kinase 7 i 100.0
3kdj_B316 Protein phosphatase 2C 56; ABA, PYL1, abscisic aci 100.0
2i44_A324 Serine-threonine phosphatase 2C; PSI-2, 8817Z, str 100.0
4da1_A389 Protein phosphatase 1K, mitochondrial; metal-ION-a 100.0
2j4o_A401 Mitogen-activated protein kinase kinase kinase 7-i 100.0
3d8k_A377 PP2C, protein phosphatase 2C; nysgrc, PSI-II, STR 100.0
2pnq_A467 [pyruvate dehydrogenase [lipoamide]]-phosphatase 1 100.0
2isn_A364 NYSGXRC-8828Z, phosphatase; pathogenic strain, pra 100.0
1txo_A237 Putative bacterial enzyme; serine/threonine protei 100.0
2pk0_A250 Serine/threonine protein phosphatase STP1; SI moti 100.0
2j82_A240 TPPHA, protein serine-threonine phosphatase; PP2C 99.98
2jfr_A234 Ser-Thr phosphatase MSPP; hydrolase, PPM phosphata 99.97
3rnr_A211 Stage II sporulation E family protein; structural 99.97
3t91_A242 Stage II sporulation protein E; SPOIIE, phosphatas 99.72
3pu9_A242 Protein serine/threonine phosphatase; PSI-biology, 99.67
3f79_A255 Probable two-component response regulator; adaptor 99.54
3zt9_A193 Serine phosphatase; hydrolase, signal transduction 99.47
3ke6_A 399 Protein RV1364C/MT1410; anti-sigma factor, anti-si 98.99
3eq2_A394 Probable two-component response regulator; adaptor 98.11
>2p8e_A PPM1B beta isoform variant 6; structural genomics, hydrolase, PSI-2, protein structure initiative; 1.82A {Homo sapiens} Back     alignment and structure
Probab=100.00  E-value=2.6e-42  Score=294.29  Aligned_cols=190  Identities=33%  Similarity=0.546  Sum_probs=169.9

Q ss_pred             CHHHHHHHHHHHHHHHHHHHHhhhcC--CCCCCCceeEEEEEeCCeEEEEEcccCcEEEEeeccCCCCCCCCccccceee
Q 027290           18 DVKAAKKAILDGFRKTDESLLQESVS--GGWQDGATAVCIWILGRTVFVANIGDAKAVVARSSIVDGSNNHLDELSSLKA   95 (225)
Q Consensus        18 ~~~~~~~~l~~a~~~~~~~l~~~~~~--~~~~~GtT~~~~~i~~~~l~~anvGDSr~~l~~~~~~~~~~~~~~~~~~~~~   95 (225)
                      +.+.+.++|.++|..+|+.+.+....  ....+|||++++++.++++|+||+||||+|++|++               ++
T Consensus       100 ~~~~~~~~l~~a~~~~~~~i~~~~~~~~~~~~~GtT~~~~~i~~~~l~vanvGDSRa~l~r~g---------------~~  164 (307)
T 2p8e_A          100 SVENVKNGIRTGFLKIDEYMRNFSDLRNGMDRSGSTAVGVMISPKHIYFINCGDSRAVLYRNG---------------QV  164 (307)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHTSTTTC---CCCEECEEEEEECSSEEEEEEESSCEEEEEETT---------------EE
T ss_pred             cHHHHHHHHHHHHHHHHHHHHhhhhhccCCCCCCCeEEEEEEECCcEEEEEccCcEEEEEECC---------------cc
Confidence            35678999999999999999886532  23458999999999999999999999999999999               99


Q ss_pred             EecCCCCCCCCHHHHHHHHHcCCEEeeCCcccceeeeeccccCccCcCC--------CcccCCceEEEEecCCCeEEEEe
Q 027290           96 IVVTRVHKAIYPQERARIQKSGGTVSSNGRLQGRLEVSRAFGDRQFKKF--------GVVATPDIHSFEVTERDHFIILG  167 (225)
Q Consensus        96 ~~lt~DH~~~~~~e~~ri~~~g~~~~~~~r~~g~~~~sR~lGd~~~k~~--------~v~~~p~i~~~~l~~~d~~lil~  167 (225)
                      .+||+||++.++.|++||..+|+.+. .+|++|.+.+||+|||..+|..        .++++|++..+++.++|+|||||
T Consensus       165 ~~lT~DH~~~~~~E~~rI~~~gg~v~-~~rv~g~l~ltRalGd~~~k~~~~~~~~~~~v~~~pdv~~~~l~~~d~~llL~  243 (307)
T 2p8e_A          165 CFSTQDHKPCNPREKERIQNAGGSVM-IQRVNGSLAVSRALGDYDYKCVDGKGPTEQLVSPEPEVYEILRAEEDEFIILA  243 (307)
T ss_dssp             EEECCCCCTTSHHHHHHHHHTTCCEE-TTEETTTBSCSBCEECGGGSCCTTCCGGGSSSBCCCEEEEEECCTTEEEEEEE
T ss_pred             ccCCCCCCCCCHHHHHHHHHcCCEEE-eCcccCeEeccccccCHHHhcCcccCCCCCeEeccCeEEEEEcCCCCeEEEEE
Confidence            99999999999999999999999987 5688888999999999998853        36889999999999988899999


Q ss_pred             cCCcccccChHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHhCCCCCCcEEEEEEecC
Q 027290          168 CDGLWGVFGPSDAVEFVQKLLKEGLSVTAVSRRLVREAVLERRCKDNCTAIVIIFRH  224 (225)
Q Consensus       168 SDGl~d~l~~~ei~~~i~~~~~~~~~~~~~a~~L~~~a~~~~~~~DNiTvivi~~~~  224 (225)
                      ||||||+++++|+.+++...+....+++.+|+.|++.|+ .+|+.||||||||++..
T Consensus       244 SDGl~d~ls~~ei~~~v~~~~~~~~~~~~~a~~Lv~~A~-~~g~~DNiTvivv~~~~  299 (307)
T 2p8e_A          244 CDGIWDVMSNEELCEYVKSRLEVSDDLENVCNWVVDTCL-HKGSRDNMSIVLVCFSN  299 (307)
T ss_dssp             CHHHHTTSCHHHHHHHHHHHHTTCCCHHHHHHHHHHHHH-HTTCCSCEEEEEEEC--
T ss_pred             CCCcccCCCHHHHHHHHHHHHhcCCCHHHHHHHHHHHHH-HcCCCCCeEEEEEECCC
Confidence            999999999999999998876656789999999999997 79999999999999864
>2i0o_A Ser/Thr phosphatase; beta sandwich, structural genomics, PSI, protei structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Anopheles gambiae} Back     alignment and structure
>1a6q_A Phosphatase 2C; catalytic mechanism, metalloenzyme, transductuin, hydrolase; 2.00A {Homo sapiens} SCOP: a.159.1.1 d.219.1.1 PDB: 3fxk_A 3fxj_A 3fxl_A* 3fxm_A* 3fxo_A Back     alignment and structure
>3qn1_B Protein phosphatase 2C 16; start domain, BET V domain, PYR/PYL/RCAR, PP2C, abscisic ACI receptor, type 2C protein phosphatase; HET: A8S; 1.80A {Arabidopsis thaliana} PDB: 3zvu_B* 3ujg_B 3nmt_B* 4ds8_B* 3rt0_A 3kb3_B* Back     alignment and structure
>2iq1_A Protein phosphatase 2C kappa, PPM1K; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.25A {Homo sapiens} Back     alignment and structure
>2irm_A Mitogen-activated protein kinase kinase kinase 7 interacting protein 1; TAK1-binding protein, TAB1; 3.00A {Anopheles gambiae} Back     alignment and structure
>3kdj_B Protein phosphatase 2C 56; ABA, PYL1, abscisic acid signaling pathway, cell membr hydrolase, magnesium, manganese, metal-binding, nucleus; HET: A8S; 1.88A {Arabidopsis thaliana} PDB: 3nmn_B* 3jrq_A* 3ujk_A 3nmv_B 3ujl_B* Back     alignment and structure
>2i44_A Serine-threonine phosphatase 2C; PSI-2, 8817Z, structural genomics, protein structure initiative; 2.04A {Toxoplasma gondii} Back     alignment and structure
>4da1_A Protein phosphatase 1K, mitochondrial; metal-ION-assisted catalysis, dehydrogenase phosphatase, hydrolase; 2.38A {Homo sapiens} PDB: 3qht_A 1l2n_A Back     alignment and structure
>2j4o_A Mitogen-activated protein kinase kinase kinase 7-interacting protein 1; TGF-beta, pseudo-phosphatase, TAK1 binding protein, protein binding; 2.25A {Homo sapiens} PDB: 2pom_A 2pop_A Back     alignment and structure
>3d8k_A PP2C, protein phosphatase 2C; nysgrc, PSI-II, STR genomics, protein structure initiative, NEW YORK structural research consortium, nysgxrc; 2.71A {Toxoplasma gondii} Back     alignment and structure
>2pnq_A [pyruvate dehydrogenase [lipoamide]]-phosphatase 1; pyruvate dehydrogenase phosphatase 1, catalytic subunit, PDP1C, hydrolase; 1.81A {Rattus norvegicus} PDB: 3n3c_A 3mq3_A Back     alignment and structure
>2isn_A NYSGXRC-8828Z, phosphatase; pathogenic strain, praseodymium, sulfate structural genomics, PSI-2, protein structure initiative; 1.90A {Toxoplasma gondii} Back     alignment and structure
>1txo_A Putative bacterial enzyme; serine/threonine protein phosphatases, PSTP/PPP, structural genomics, PSI, protein structure initiative; 1.95A {Mycobacterium tuberculosis} SCOP: d.219.1.1 PDB: 2cm1_A Back     alignment and structure
>2pk0_A Serine/threonine protein phosphatase STP1; SI motif, signaling protein; 2.65A {Streptococcus agalactiae} Back     alignment and structure
>2j82_A TPPHA, protein serine-threonine phosphatase; PP2C family phosphatase, hydrolase; 1.28A {Synechococcus elongatus} PDB: 2j86_A 2y09_A 2xzv_A Back     alignment and structure
>2jfr_A Ser-Thr phosphatase MSPP; hydrolase, PPM phosphatase, manganese, phosphate; 0.83A {Mycobacterium smegmatis} PDB: 2jfs_A 2jft_A 2v06_A Back     alignment and structure
>3rnr_A Stage II sporulation E family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.00A {Thermanaerovibrio acidaminovorans} Back     alignment and structure
>3t91_A Stage II sporulation protein E; SPOIIE, phosphatase, manganese binding, PP2C PH domain; HET: GL0 MAN; 2.64A {Bacillus subtilis} PDB: 3t9q_A* Back     alignment and structure
>3pu9_A Protein serine/threonine phosphatase; PSI-biology, MCSG, structural genomics; HET: MSE; 1.55A {Sphaerobacter thermophilus} Back     alignment and structure
>3f79_A Probable two-component response regulator; adaptor, signaling protein; 2.80A {Pseudomonas aeruginosa} PDB: 3es2_A Back     alignment and structure
>3zt9_A Serine phosphatase; hydrolase, signal transduction, protein protein interaction,; HET: PEG; 1.75A {Moorella thermoacetica} Back     alignment and structure
>3ke6_A Protein RV1364C/MT1410; anti-sigma factor, anti-sigma factor antagonist, phosphatase serine kinase, ATPase, unknown function; 2.60A {Mycobacterium tuberculosis} Back     alignment and structure
>3eq2_A Probable two-component response regulator; adaptor sigmas, signaling protein; 3.40A {Pseudomonas aeruginosa} PDB: 3f7a_A Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 225
d1a6qa2295 d.219.1.1 (A:2-296) Protein serine/threonine phosp 2e-25
d1txoa_235 d.219.1.1 (A:) putative serine/threonine phosphata 1e-08
>d1a6qa2 d.219.1.1 (A:2-296) Protein serine/threonine phosphatase 2C, catalytic domain {Human (Homo sapiens) [TaxId: 9606]} Length = 295 Back     information, alignment and structure

class: Alpha and beta proteins (a+b)
fold: PP2C-like
superfamily: PP2C-like
family: PP2C-like
domain: Protein serine/threonine phosphatase 2C, catalytic domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 98.5 bits (244), Expect = 2e-25
 Identities = 67/216 (31%), Positives = 101/216 (46%), Gaps = 28/216 (12%)

Query: 18  DVKAAKKAILDGFRKTDES--LLQESVSGGWQDGATAVCIWILGRTVFVANIGDAKAVVA 75
            V+  K  I  GF + DE   ++ E   G  + G+TAV + I  +  +  N GD++ ++ 
Sbjct: 92  SVENVKNGIRTGFLEIDEHMRVMSEKKHGADRSGSTAVGVLISPQHTYFINCGDSRGLLC 151

Query: 76  RSSIVDGSNNHLDELSSLKAIVVTRVHKAIYPQERARIQKSGGTVSSNGRLQGRLEVSRA 135
           R+  V                  T+ HK   P E+ RIQ +GG+V    R+ G L VSRA
Sbjct: 152 RNRKV---------------HFFTQDHKPSNPLEKERIQNAGGSVM-IQRVNGSLAVSRA 195

Query: 136 FGDRQFKKFG--------VVATPDIHSFEVT-ERDHFIILGCDGLWGVFGPSDAVEFVQK 186
            GD  +K           V   P++H  E + E D FIIL CDG+W V G  +  +FV+ 
Sbjct: 196 LGDFDYKCVHGKGPTEQLVSPEPEVHDIERSEEDDQFIILACDGIWDVMGNEELCDFVRS 255

Query: 187 LLKEGLSVTAVSRRLVREAVLERRCKDNCTAIVIIF 222
            L+    +  V   +V    L +  +DN + I+I F
Sbjct: 256 RLEVTDDLEKVCNEVVDTC-LYKGSRDNMSVILICF 290
>d1txoa_ d.219.1.1 (A:) putative serine/threonine phosphatase pstp/ppp {Mycobacterium tuberculosis [TaxId: 1773]} Length = 235 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query225
d1a6qa2295 Protein serine/threonine phosphatase 2C, catalytic 100.0
d1txoa_235 putative serine/threonine phosphatase pstp/ppp {My 100.0
>d1a6qa2 d.219.1.1 (A:2-296) Protein serine/threonine phosphatase 2C, catalytic domain {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
class: Alpha and beta proteins (a+b)
fold: PP2C-like
superfamily: PP2C-like
family: PP2C-like
domain: Protein serine/threonine phosphatase 2C, catalytic domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.2e-43  Score=297.42  Aligned_cols=192  Identities=34%  Similarity=0.569  Sum_probs=174.5

Q ss_pred             cCCHHHHHHHHHHHHHHHHHHHHhhhc--CCCCCCCceeEEEEEeCCeEEEEEcccCcEEEEeeccCCCCCCCCccccce
Q 027290           16 HLDVKAAKKAILDGFRKTDESLLQESV--SGGWQDGATAVCIWILGRTVFVANIGDAKAVVARSSIVDGSNNHLDELSSL   93 (225)
Q Consensus        16 ~~~~~~~~~~l~~a~~~~~~~l~~~~~--~~~~~~GtT~~~~~i~~~~l~~anvGDSr~~l~~~~~~~~~~~~~~~~~~~   93 (225)
                      ....+.+.++|.++|.++++.+.....  .....+|||++++++.++++|+||+||||+|+++++               
T Consensus        90 ~~~~~~~~~al~~a~~~~~~~~~~~~~~~~~~~~~GtTa~~~~i~~~~l~vanvGDSR~~l~~~~---------------  154 (295)
T d1a6qa2          90 APSVENVKNGIRTGFLEIDEHMRVMSEKKHGADRSGSTAVGVLISPQHTYFINCGDSRGLLCRNR---------------  154 (295)
T ss_dssp             SCCHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCEECEEEEEECSSEEEEEEESSCEEEEEETT---------------
T ss_pred             cchHHHHHHHHHHHHHHHHHHHhhhhhhccCcCCCCCeEEEEEeeCCEEEEEecCCCeEEEeecc---------------
Confidence            445678999999999999999876543  344568999999999999999999999999999999               


Q ss_pred             eeEecCCCCCCCCHHHHHHHHHcCCEEeeCCcccceeeeeccccCccCcCC--------CcccCCceEEEEec-CCCeEE
Q 027290           94 KAIVVTRVHKAIYPQERARIQKSGGTVSSNGRLQGRLEVSRAFGDRQFKKF--------GVVATPDIHSFEVT-ERDHFI  164 (225)
Q Consensus        94 ~~~~lt~DH~~~~~~e~~ri~~~g~~~~~~~r~~g~~~~sR~lGd~~~k~~--------~v~~~p~i~~~~l~-~~d~~l  164 (225)
                      .+++||.||+|.++.|++||...||.+. .+|++|.+.+||++||..+|..        .+++.|+|..+.+. ++++||
T Consensus       155 ~~~~lT~dH~~~~~~E~~Ri~~~gg~v~-~~r~~g~l~~tRa~Gd~~~k~~~~~~~~~~~v~~~Pdi~~~~~~~~~~~fl  233 (295)
T d1a6qa2         155 KVHFFTQDHKPSNPLEKERIQNAGGSVM-IQRVNGSLAVSRALGDFDYKCVHGKGPTEQLVSPEPEVHDIERSEEDDQFI  233 (295)
T ss_dssp             EEEEECCCCCTTSHHHHHHHHHTTCCEE-TTEETTTBSCSBCEECGGGSCCTTCCGGGSSSBCCCEEEEEECCTTTEEEE
T ss_pred             cceeeccccCcccHHHHhhHhhcCCccc-ccccCCceeeeeccCcHHhhhccccCcccccccccccceEEEeecccceeE
Confidence            9999999999999999999999999996 6799999999999999999854        48999999999986 567799


Q ss_pred             EEecCCcccccChHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHhCCCCCCcEEEEEEecC
Q 027290          165 ILGCDGLWGVFGPSDAVEFVQKLLKEGLSVTAVSRRLVREAVLERRCKDNCTAIVIIFRH  224 (225)
Q Consensus       165 il~SDGl~d~l~~~ei~~~i~~~~~~~~~~~~~a~~L~~~a~~~~~~~DNiTvivi~~~~  224 (225)
                      |||||||||+|+++|+++++.+.+....+++.+|+.|+++|+ .+++.||||||||+|+.
T Consensus       234 vL~SDGl~d~l~~~ei~~~v~~~~~~~~~~~~~a~~Lv~~A~-~~gs~DNiTvivv~~~~  292 (295)
T d1a6qa2         234 ILACDGIWDVMGNEELCDFVRSRLEVTDDLEKVCNEVVDTCL-YKGSRDNMSVILICFPN  292 (295)
T ss_dssp             EEECHHHHTTSCHHHHHHHHHHHHTTCCCHHHHHHHHHHHHH-HTTCCSCEEEEEEECTT
T ss_pred             eeecCcccccCCHHHHHHHHHHHhhcCCCHHHHHHHHHHHHH-hcCCCCCeEEEEEeccC
Confidence            999999999999999999999888777899999999999997 79999999999999975
>d1txoa_ d.219.1.1 (A:) putative serine/threonine phosphatase pstp/ppp {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure