Citrus Sinensis ID: 027334

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-----
Protein Sequence
MAQQPSLIGGGAAVAVISPQYCCPYPVDLAIVRKVMTITDGNFVVTDTNGNILFKVKGVFLTFIHQRRVLLDGAGNPIVTLREKAMTAHHRWQVFRGESTEPQDLIFSAKTSSVWNVRTKLDVFLANNTKEDVCDFRVKGSWFERSCTIYAGESSAIIAQMHKKHTVQSILIGKDNFAVTVYPNIDYAFIVALIVILDEINHASSSSTGGGGADVGADFGAMFSG
Secondary Structure (PSIPRED)
ccccccccccccEEEEEcccccccccEEEEEEEEEEEEEcccEEEEcccccEEEEEEcccccccccEEEEEccccccEEEEEEccccccccEEEEEEcccccccEEEEEEEcccccccEEEEEEEcccccccEEEEEEEEEEcccEEEEEEcccccEEEEEEEccEEEEEEEEccEEEEEEEccccHHHHHHHHHHHHHHccccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
ccccccccccccccEEEcccHcccccEEEEEEEEEEEEccccEEEEEccccEEEEEccccccccccEEEEEcccccEEEEEEcccccccccEEEEEcccccccccEEEEEccccEccccEEEEEEccccccccccEEEEEccccccEEEEEccccEEEEEEEEEccccEEEEcccEEEEEEcccccHHHHHHHHHHHHHHcccccccccccccccHHHHcccccc
Coil and Loop (DISEMBL)
maqqpsligggAAVAVispqyccpypvdLAIVRKVMtitdgnfvvtdtngniLFKVKGVFLTFIHQRRVLldgagnpiVTLREKAMTAHhrwqvfrgestepqdlifsaktssvwnVRTKLDVFLanntkedvcdfrvkgswfersctiyagESSAIIAQMHKKHTVQsiligkdnfavtvypnIDYAFIVALIVILDEinhasssstggggadvgadfgamfsg
Flexible Loop (DISEMBL)
maqqpsliGGGAAVAVISPQYCCPYPVDLAIVRKVMTITDGNFVVTDTNGNILFKVKGVFLTFIHQRRVLLDGAGNPIVTLREKAMTAHHRWQvfrgestepqDLIFsaktssvwnvRTKLDvflanntkedvcdfrvkgsWFERSCTIYAGESSAIIAQMHKKHTVQSILIGKDNFAVTVYPNIDYAFIVALIVILDEINHAsssstggggadVGADFGAMFSG
Low Complexity Region (SEG)
MAQQPSLIGGGAAVAVISPQYCCPYPVDLAIVRKVMTITDGNFVVTDTNGNILFKVKGVFLTFIHQRRVLLDGAGNPIVTLREKAMTAHHRWQVFRGESTEPQDLIFSAKTSSVWNVRTKLDVFLANNTKEDVCDFRVKGSWFERSCTIYAGESSAIIAQMHKKHTVQSILIGKDNFAVTVYPNIDYAFIVALIVILDEINHasssstggggadvgadfgaMFSG
Disordered region (IsUnstruct)
*******IGGGAAVAVISPQYCCPYPVDLAIVRKVMTITDGNFVVTDTNGNILFKVKGVFLTFIHQRRVLLDGAGNPIVTLREKAMTAHHRWQVFRGESTEPQDLIFSAKTSSVWNVRTKLDVFLANNTKEDVCDFRVKGSWFERSCTIYAGESSAIIAQMHKKHTVQSILIGKDNFAVTVYPNIDYAFIVALIVILDEIN************************
Disordered Region (DISOPRED)
*************VAVISPQYCCPYPVDLAIVRKVMTITDGNFVVTDTNGNILFKVKGVFLTFIHQRRVLLDGAGNPIVTLREKAMTAHHRWQVFRGESTEPQDLIFSAKTSSVWNVRTKLDVFLANNTKEDVCDFRVKGSWFERSCTIYAGESSAIIAQMHKKHTVQSILIGKDNFAVTVYPNIDYAFIVALIVILD********************FGAMFS*
Disordered Region (DISEMBL)
********GGGAAVAVISPQYCCPYPVDLAIVRKVMTITDGNFVVTDTNGNILFKVKGVFLTFIHQRRVLLDGAGNPIVTLREKAMTAHHRWQVFRGESTEPQDLIFSAKTSSVWNVRTKLDVFLANNTKEDVCDFRVKGSWFERSCTIYAGESSAIIAQMHKKHTVQSILIGKDNFAVTVYPNIDYAFIVALIVILDEINHASSSSTGGGGADVGADFGAMFSG
Disordered Region (DISPRO)
**********GAAVAVISPQYCCPYPVDLAIVRKVMTITDGNFVVTDTNGNILFKVKGVFLTFIHQRRVLLDGAGNPIVTLREKAMTAHHRWQVFRGESTEPQDLIFSAKTSSVWNVRTKLDVFLANNTKEDVCDFRVKGSWFERSCTIYAGESSAIIAQMHKKHTVQSILIGKDNFAVTVYPNIDYAFIVALIVILDEINHA**********************
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
SSSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MAQQPSLIGGGAAVAVISPQYCCPYPVDLAIVRKVMTITDGNFVVTDTNGNILFKVKGVFLTFIHQRRVLLDGAGNPIVTLREKAMTAHHRWQVFRGESTEPQDLIFSAKTSSVWNVRTKLDVFLANNTKEDVCDFRVKGSWFERSCTIYAGESSAIIAQMHKKHTVQSILIGKDNFAVTVYPNIDYAFIVALIVILDEINHASSSSTGGGGADVGADFGAMFSG
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	225	2.2.26 [Sep-21-2011]
Q9LZX1	217	Protein LURP-one-related	yes	no	0.884	0.917	0.610	7e-75
Q9SF24	194	Protein LURP-one-related	no	no	0.853	0.989	0.597	1e-67
Q9LQ36	224	Protein LURP-one-related	no	no	0.835	0.839	0.560	2e-60
Q9ZQR8	207	Protein LURP1 OS=Arabidop	no	no	0.853	0.927	0.537	3e-56
Q9LSQ1	185	Protein LURP-one-related	no	no	0.795	0.967	0.386	1e-33
Q9LYM3	204	Protein LURP-one-related	no	no	0.822	0.906	0.373	5e-31
B3H5L1	197	Protein LURP-one-related	no	no	0.835	0.954	0.302	1e-22
Q9LVZ8	220	Protein LURP-one-related	no	no	0.786	0.804	0.296	2e-18
A0MFH4	215	Protein LURP-one-related	no	no	0.831	0.869	0.273	6e-13
Q9SSC7	210	Protein LURP-one-related	no	no	0.737	0.790	0.300	2e-12

>sp|Q9LZX1|LOR15_ARATH Protein LURP-one-related 15 OS=Arabidopsis thaliana GN=At5g01750 PE=1 SV=1

 Score =  280 bits (715), Expect = 7e-75,   Method: Compositional matrix adjust.
 Identities = 124/203 (61%), Positives = 162/203 (79%), Gaps = 4/203 (1%)

Query: 5   PSLIGGGAAVAVISPQYCCPYPVDLAIVRKVMTITDGNFVVTDTNGNILFKVKGVFLTFI 64
           P+   GG    V+ P+YC PYP+D+AIVRK+M++TDGNFV+TD NGN+LFKVK      +
Sbjct: 19  PTPQAGGV---VVDPKYCAPYPIDMAIVRKMMSLTDGNFVITDVNGNLLFKVKEPVFG-L 74

Query: 65  HQRRVLLDGAGNPIVTLREKAMTAHHRWQVFRGESTEPQDLIFSAKTSSVWNVRTKLDVF 124
           H +RVLLDG+G P+VTLREK ++ H RWQVFRG ST+ +DL+++ K SS+  ++TKLDVF
Sbjct: 75  HDKRVLLDGSGTPVVTLREKMVSMHDRWQVFRGGSTDQRDLLYTVKRSSMLQLKTKLDVF 134

Query: 125 LANNTKEDVCDFRVKGSWFERSCTIYAGESSAIIAQMHKKHTVQSILIGKDNFAVTVYPN 184
           L +N  E  CDFRVKGSW ERSC +YAGES AI+AQMH+KHTVQS+ +GKDNF+VTVYPN
Sbjct: 135 LGHNKDEKRCDFRVKGSWLERSCVVYAGESDAIVAQMHRKHTVQSVFLGKDNFSVTVYPN 194

Query: 185 IDYAFIVALIVILDEINHASSSS 207
           +DYAFI +L+VILD++N    ++
Sbjct: 195 VDYAFIASLVVILDDVNREDRAA 217

Might be related to the phospholipid scramblase and tubby-like superfamily of membrane tethered transcription factors.
Arabidopsis thaliana (taxid: 3702)

>sp|Q9SF24|LOR10_ARATH Protein LURP-one-related 10 OS=Arabidopsis thaliana GN=At3g11740 PE=2 SV=2

 Score =  256 bits (653), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 116/194 (59%), Positives = 152/194 (78%), Gaps = 2/194 (1%)

Query: 14  VAVISPQYCCPYPVDLAIVRKVMTITDGNFVVTDTNGNILFKVKGVFLTFIHQRRVLLDG 73
           +A++SP +C PYP++L IVRKVMT+TDGNF VTD NGN+LFKVK    + I  +R+LLD 
Sbjct: 1   MAIVSPNFCAPYPIELGIVRKVMTLTDGNFAVTDVNGNLLFKVKEPLFS-ISDKRILLDA 59

Query: 74  AGNPIVTLREKAMTAHHRWQVFRGESTEPQDLIFSAKTSSVWNV-RTKLDVFLANNTKED 132
              PI+TLRE  ++ H RW V+RG+ST+  DL+++ K SS+  + + KLD+FLA+N +  
Sbjct: 60  YDTPILTLRENKVSLHDRWLVYRGKSTDQSDLLYTLKRSSMIQIMKPKLDIFLAHNKEMK 119

Query: 133 VCDFRVKGSWFERSCTIYAGESSAIIAQMHKKHTVQSILIGKDNFAVTVYPNIDYAFIVA 192
           +CDF VKGSW +RSC +YAG+S AI+AQMHKKHT QSILIGK NF+VTVYPN+D+AFIV+
Sbjct: 120 ICDFHVKGSWIDRSCVVYAGKSDAIVAQMHKKHTAQSILIGKSNFSVTVYPNVDFAFIVS 179

Query: 193 LIVILDEINHASSS 206
           LIVILD+IN   S 
Sbjct: 180 LIVILDDINREDSE 193

Might be related to the phospholipid scramblase and tubby-like superfamily of membrane tethered transcription factors.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9LQ36|LOR1_ARATH Protein LURP-one-related 1 OS=Arabidopsis thaliana GN=At1g33840 PE=2 SV=2

 Score =  232 bits (591), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 106/189 (56%), Positives = 144/189 (76%), Gaps = 1/189 (0%)

Query: 13  AVAVISPQYCCPYPVDLAIVRKVMTITDGNFVVTDTNGNILFKVKGVFLTFIHQRRVLLD 72
           A  ++ P+YC  +PVDLAIVRKV+ ITDGNFV+T+  GN+LFKVK  F + +H++R+L+D
Sbjct: 24  AGVIVDPKYCSLHPVDLAIVRKVLKITDGNFVITNAEGNLLFKVKDPFFS-LHEKRILMD 82

Query: 73  GAGNPIVTLREKAMTAHHRWQVFRGESTEPQDLIFSAKTSSVWNVRTKLDVFLANNTKED 132
           G G  ++TL+ K MT H RW VFRG STE  DL+++ K S++  + TKLDVFLA+N ++ 
Sbjct: 83  GFGTKVLTLKGKIMTMHDRWLVFRGGSTEEVDLLYTVKRSNMVQITTKLDVFLADNIEQK 142

Query: 133 VCDFRVKGSWFERSCTIYAGESSAIIAQMHKKHTVQSILIGKDNFAVTVYPNIDYAFIVA 192
            CD+R++G W E SC +YAG+S  I+AQM +K T+QS+L GKDNF +TV PN+DYAFI +
Sbjct: 143 KCDYRLEGVWLETSCFVYAGDSDIILAQMREKKTMQSVLFGKDNFCLTVNPNVDYAFIAS 202

Query: 193 LIVILDEIN 201
           LIVIL EI 
Sbjct: 203 LIVILVEIQ 211

Might be related to the phospholipid scramblase and tubby-like superfamily of membrane tethered transcription factors.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9ZQR8|LURP1_ARATH Protein LURP1 OS=Arabidopsis thaliana GN=LURP1 PE=2 SV=1

 Score =  218 bits (555), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 108/201 (53%), Positives = 139/201 (69%), Gaps = 9/201 (4%)

Query: 3   QQPSLIGGGAAVAVISPQYCCPYPVDLAIVRKVMTITDGNFVVTDTNGNILFKVKGVFLT 62
           QQP +I G         +YC P PV LAIVRKVM ITDGNFV+T  +G +LFKVK    +
Sbjct: 2   QQPCVIVGS--------KYCSPNPVGLAIVRKVMKITDGNFVITSADGKLLFKVKDPLFS 53

Query: 63  FIHQRRVLLDGAGNPIVTLREKAMTAHHRWQVFRGESTEPQDLIFSAKTSSVWNVRTKLD 122
            +H +R+LLD +G  ++TLR K MT H RWQVFRG STE   L+++ K SS+  +  KL+
Sbjct: 54  -LHGKRILLDCSGAKVLTLRGKMMTMHDRWQVFRGGSTEEGALLYTVKRSSMIQLAPKLE 112

Query: 123 VFLANNTKEDVCDFRVKGSWFERSCTIYAGESSAIIAQMHKKHTVQSILIGKDNFAVTVY 182
           VFLANN +E +CDF+VKG+W + SC +YAG+S  IIA M  K T++    GKD+F+VTV 
Sbjct: 113 VFLANNVEEKICDFKVKGAWLDDSCVVYAGDSDTIIAHMCGKQTMRGFFFGKDHFSVTVD 172

Query: 183 PNIDYAFIVALIVILDEINHA 203
            N+DYAFI +LIVIL EI  A
Sbjct: 173 KNVDYAFIASLIVILVEIEKA 193

Involved in basal defense against virulent oomycetes. Might be related to the phospholipid scramblase and tubby-like superfamily of membrane tethered transcription factors.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9LSQ1|LOR13_ARATH Protein LURP-one-related 13 OS=Arabidopsis thaliana GN=At3g16900 PE=3 SV=1

 Score =  142 bits (359), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 78/202 (38%), Positives = 117/202 (57%), Gaps = 23/202 (11%)

Query: 1   MAQQPSLIGGGAAVAVISPQYCCPYPVDLAIVRKVMTITDGNFVVTDTNGNILFKVKGVF 60
           MA+Q         + ++  ++  P P+DL I         G+  V D  GN +FKVK   
Sbjct: 1   MAKQDP-TSSNTMLPLVGSEFVRPQPLDLTIT--------GD-TVKDATGNKVFKVKTPL 50

Query: 61  LTFIHQRRVLLDGAGNPIVTLREKAMTAHHRWQVFRGESTEPQDLIFSAKTSSVWNVRTK 120
              +H +R+L+D   +PIVT++ K  + H RWQV+RG   +  D IF+ K SS   ++T+
Sbjct: 51  FG-LHNKRILVDPNDSPIVTMKMKVTSKHDRWQVYRGSDLD--DKIFTVKRSSTVQLKTR 107

Query: 121 LDVFLANN-TKEDVCDFRVKGSWFERSCTIYAGESSAIIAQMHKKHTVQSILIGKDNFAV 179
           ++VFL +N T+E  CDF +KG + +R+CTIY  +S+ IIAQ+++ H         +    
Sbjct: 108 VEVFLKHNQTRESSCDFTIKGRFMKRACTIYVADSTKIIAQVYEGH---------ERLVA 158

Query: 180 TVYPNIDYAFIVALIVILDEIN 201
           T+YPN+DYAFIV LI I D IN
Sbjct: 159 TIYPNVDYAFIVTLIFIFDLIN 180

Might be related to the phospholipid scramblase and tubby-like superfamily of membrane tethered transcription factors.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9LYM3|LOR14_ARATH Protein LURP-one-related 14 OS=Arabidopsis thaliana GN=At3g56180 PE=2 SV=2

 Score =  134 bits (337), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 72/193 (37%), Positives = 118/193 (61%), Gaps = 8/193 (4%)

Query: 10  GGAAVAVISPQYCCPYPVDLAIVRKVMTITDGNFVVTDTNGNILFKVKGVFLTFIHQRRV 69
           G  A++V+S Q+C PYP+DL + RKV   +   + V D +GN+L ++ G    F +++RV
Sbjct: 12  GDPAISVVSDQFCNPYPMDLLVKRKVQNFSKDYYEVFDPSGNLLLQIDGQAWGF-NRKRV 70

Query: 70  LLDGAGNPIVTLREKAMTAHHRWQVFRGESTEPQDLIFSAKTSSVWNVRTKLDVFLANNT 129
           + D AG  I+++R+K +   ++W+V  GES E +DL+F+ + S   +++T +DVFL  N 
Sbjct: 71  MRDPAGFTILSMRQKGLALKNKWEVHGGESKEREDLLFTVQQSQAVSLKTSVDVFLPENN 130

Query: 130 ---KEDVCDFRVKGSWFERSCTIYAGESSAIIAQMHKKHTVQSILIGKDNFAVTVYPNID 186
              K + CDF   G +   S  ++  ++ A+IA +    T  S   GK NF V V P +D
Sbjct: 131 NVKKTNTCDFHASGGYSNISFKVF--KADALIAGVG--FTWGSFCKGKYNFKVRVNPEVD 186

Query: 187 YAFIVALIVILDE 199
           YAFI+AL+V++D+
Sbjct: 187 YAFIIALLVMVDD 199

Might be related to the phospholipid scramblase and tubby-like superfamily of membrane tethered transcription factors.

Arabidopsis thaliana (taxid: 3702)

>sp|B3H5L1|LOR9_ARATH Protein LURP-one-related 9 OS=Arabidopsis thaliana GN=At3g10986 PE=3 SV=1

 Score =  106 bits (264), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 59/195 (30%), Positives = 112/195 (57%), Gaps = 7/195 (3%)

Query: 14  VAVISPQYCCPYPVDLAIVRKVMTITDGNFVVTDTNGNILFKVKGVFLTFIHQRRVLLDG 73
           V+V+   +C PY  +L + R+  ++    + V D + N++F V G     I ++RVL D 
Sbjct: 2   VSVVGEMFCNPYTTELVVRRRRESLKRERYDVFDLSNNLIFTVDGGIWN-IRRKRVLRDA 60

Query: 74  AGNPIVTLREKAMTA-HHRWQVFRGESTEPQDLIFSAKTSSVWNVRTKLDVFLA-NNTKE 131
           AG P++++R K +    + W+V++G+STE  +L+FSA+  ++ + +T LDV L  + +  
Sbjct: 61  AGIPLLSMRTKGLVPMRYNWEVYKGDSTESDNLLFSAREPNLLSFKTSLDVTLPPDQSST 120

Query: 132 DVC----DFRVKGSWFERSCTIYAGESSAIIAQMHKKHTVQSILIGKDNFAVTVYPNIDY 187
           D+     DF+  G +   S  ++    + ++A++    T   ++ G  +F V V P +D+
Sbjct: 121 DISSVEPDFQTFGRYIGSSFKLFEPIHNTLLAEVVHDFTWGGLIKGSYSFKVRVNPYVDF 180

Query: 188 AFIVALIVILDEINH 202
           AF+VAL+VI D+ ++
Sbjct: 181 AFVVALLVITDDTSN 195

Might be related to the phospholipid scramblase and tubby-like superfamily of membrane tethered transcription factors.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9LVZ8|LOR12_ARATH Protein LURP-one-related 12 OS=Arabidopsis thaliana GN=At3g15810 PE=2 SV=1

 Score = 92.4 bits (228), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 54/182 (29%), Positives = 92/182 (50%), Gaps = 5/182 (2%)

Query: 29  LAIVRKVMTITDGNFVVTDTNGNILFKVKGVFL-TFIHQRRVLLDGAGNPIVTLREKAMT 87
           L + +  +  T   F   D  G+I+F+V      T  +   VL+D  G  ++T++ K  T
Sbjct: 33  LTVCKTSLFYTGDGFAAYDCRGDIIFRVDSYGPDTRDNDEIVLMDATGKCLLTVKRKRPT 92

Query: 88  AHHRWQVFRGESTEPQDLIFSAKTSSVWNVRTKLDVFLANNTKEDVCDFRVKGSWFERSC 147
            H RW+ F GE +E Q  IFS + SS+   R  ++V + + T E+   + + G + +RSC
Sbjct: 93  LHQRWEGFLGERSEGQKPIFSVRRSSIIG-RCTMEVEVYDGTGEE---YIIDGDFSQRSC 148

Query: 148 TIYAGESSAIIAQMHKKHTVQSILIGKDNFAVTVYPNIDYAFIVALIVILDEINHASSSS 207
            IY  +   +     K     ++++G+D F + + P  D AF + L+V+LD+IN      
Sbjct: 149 LIYDTKKCTVAEIKRKVDASTNVMLGRDVFTLEIKPGFDGAFAMGLVVVLDQINGDDPVE 208

Query: 208 TG 209
            G
Sbjct: 209 IG 210

Might be related to the phospholipid scramblase and tubby-like superfamily of membrane tethered transcription factors.

Arabidopsis thaliana (taxid: 3702)

>sp|A0MFH4|LOR16_ARATH Protein LURP-one-related 16 OS=Arabidopsis thaliana GN=At5g20640 PE=2 SV=2

 Score = 74.3 bits (181), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 56/205 (27%), Positives = 100/205 (48%), Gaps = 18/205 (8%)

Query: 16  VISPQYCCPYPVDLAIVRKVMTITDGNFVVTDTNGNILFKVKGVFLTFIHQRRVLLDGAG 75
           V+S +Y       L + R+   +  G FVV+++   ++F+V G  +     + +L +G G
Sbjct: 12  VLSRRYSSESETVLVVRRRPPMVNGGGFVVSNSKQVVVFRVDGCGVLGTKGKLLLRNGDG 71

Query: 76  NPIVTLRE-----KAMT-AHHRWQVFRGESTEPQDLIFSAKTSS----VWNVRTKLDVFL 125
           N ++ +R+     +A+   H++W+ F  ++   + L+F+ K       V N   K+   L
Sbjct: 72  NDLLLIRKMGGIVQALNMVHNKWEGFGYDNEGTERLVFTLKDPKDSCLVQNSSIKI---L 128

Query: 126 ANNTKEDVCDFR-----VKGSWFERSCTIYAGESSAIIAQMHKKHTVQSILIGKDNFAVT 180
            +     +   R     +KGS+ ER+C I   +  AI     +K   + +   KD + V 
Sbjct: 129 VHGKPPKISSTRNNYVEIKGSFAERACNIMDSDGKAIAKVRIEKEMEEMVGNKKDLYHVI 188

Query: 181 VYPNIDYAFIVALIVILDEINHASS 205
           V PN+D +FIV LI ILD I+  S+
Sbjct: 189 VKPNVDQSFIVGLIAILDYIHGEST 213

Might be related to the phospholipid scramblase and tubby-like superfamily of membrane tethered transcription factors.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9SSC7|LOR5_ARATH Protein LURP-one-related 5 OS=Arabidopsis thaliana GN=At1g80120 PE=1 SV=1

 Score = 73.2 bits (178), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 52/173 (30%), Positives = 94/173 (54%), Gaps = 7/173 (4%)

Query: 32  VRKVMTITDGN-FVVTDTNGNILFKVK--GVFLTFIHQRRVLLDGAGNPIVTLREKAMTA 88
           VRK      G+ F V D  G+++F+V   G   T      VL+D  G  ++TLR K  + 
Sbjct: 21  VRKTSLFFAGDGFTVYDCKGSLVFRVDSYGGPNTRDTDEVVLMDAHGRCLLTLRRKRPSL 80

Query: 89  HHRWQVFRGESTEPQDLIFSAKTSSVWNVRTKLDVFLANNTKEDVCDFRVKGSWFERSCT 148
             RW+ + GE ++ Q  IF  + SS+   R  + V +  + +    ++ ++GS+  R+CT
Sbjct: 81  RRRWEGYLGERSDGQKPIFGVRRSSIIG-RNSVTVEVYGDYQ--CSEYLIEGSFGARNCT 137

Query: 149 IYAGESSAIIAQMHKK-HTVQSILIGKDNFAVTVYPNIDYAFIVALIVILDEI 200
           +   E+   +A++ +K     ++++GKD F++ V P  D AF + L+++LD+I
Sbjct: 138 VVEAETRRKVAEIRRKVDASTNVMLGKDVFSLNVKPGFDGAFAMGLVLVLDQI 190

Might be related to the phospholipid scramblase and tubby-like superfamily of membrane tethered transcription factors.

Arabidopsis thaliana (taxid: 3702)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	225
388504720	214	unknown [Lotus japonicus]	0.84	0.883	0.778	2e-83
388516681	216	unknown [Lotus japonicus]	0.826	0.861	0.786	5e-83
356568182	216	PREDICTED: protein LURP-one-related 15-l	0.831	0.865	0.75	2e-81
255637572	216	unknown [Glycine max]	0.831	0.865	0.739	6e-80
356532197	215	PREDICTED: protein LURP-one-related 15-l	0.822	0.860	0.770	5e-79
255586349	215	conserved hypothetical protein [Ricinus	0.862	0.902	0.710	9e-79
357506501	226	hypothetical protein MTR_7g072170 [Medic	0.862	0.858	0.692	5e-77
357506497	215	hypothetical protein MTR_7g072140 [Medic	0.831	0.869	0.718	2e-76
357506493	212	hypothetical protein MTR_7g072120 [Medic	0.831	0.882	0.712	2e-76
356496281	198	PREDICTED: protein LURP-one-related 15-l	0.84	0.954	0.693	3e-76

>gi|388504720|gb|AFK40426.1| unknown [Lotus japonicus]

 Score =  314 bits (804), Expect = 2e-83,   Method: Compositional matrix adjust.
 Identities = 148/190 (77%), Positives = 162/190 (85%), Gaps = 1/190 (0%)

Query: 16  VISPQYCCPYPVDLAIVRKVMTITDGNFVVTDTNGNILFKVKGVFLTFIHQRRVLLDGAG 75
           V  PQYC PYPVDLAIV+KVMTI+DGNFVVTD NGNI+FKVKG  LT +  RRVL+D AG
Sbjct: 26  VFGPQYCAPYPVDLAIVKKVMTISDGNFVVTDINGNIVFKVKGSLLT-LRDRRVLIDAAG 84

Query: 76  NPIVTLREKAMTAHHRWQVFRGESTEPQDLIFSAKTSSVWNVRTKLDVFLANNTKEDVCD 135
           NPI TLR K MTAH RWQ +RGESTE +DLIF+ K SS+   +TKLDVFLA NTKEDVCD
Sbjct: 85  NPIATLRRKIMTAHDRWQAYRGESTEAKDLIFTLKRSSLIQFKTKLDVFLATNTKEDVCD 144

Query: 136 FRVKGSWFERSCTIYAGESSAIIAQMHKKHTVQSILIGKDNFAVTVYPNIDYAFIVALIV 195
           F+VKGSWFERSC +YAGES+ I+AQMHKKHTVQSILIGKDNF VTVYPNIDYAFIVALIV
Sbjct: 145 FKVKGSWFERSCVVYAGESNTIVAQMHKKHTVQSILIGKDNFTVTVYPNIDYAFIVALIV 204

Query: 196 ILDEINHASS 205
           ILDEIN   S
Sbjct: 205 ILDEINEDES 214

Source: Lotus japonicus

Species: Lotus japonicus

Genus: Lotus

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388516681|gb|AFK46402.1| unknown [Lotus japonicus]

 Score =  313 bits (801), Expect = 5e-83,   Method: Compositional matrix adjust.
 Identities = 147/187 (78%), Positives = 161/187 (86%), Gaps = 1/187 (0%)

Query: 16  VISPQYCCPYPVDLAIVRKVMTITDGNFVVTDTNGNILFKVKGVFLTFIHQRRVLLDGAG 75
           V  PQYC PYPVDLAIV+KVMTI+DGNFVVTD NGNI+FKVKG  LT +  RRVL+D AG
Sbjct: 26  VFGPQYCAPYPVDLAIVKKVMTISDGNFVVTDINGNIVFKVKGSLLT-LRDRRVLIDAAG 84

Query: 76  NPIVTLREKAMTAHHRWQVFRGESTEPQDLIFSAKTSSVWNVRTKLDVFLANNTKEDVCD 135
           NPI TLR K MTAH RWQ +RGESTE +DLIF+ K SS+   +TKLDVFLA NTKEDVCD
Sbjct: 85  NPIATLRRKIMTAHDRWQAYRGESTEAKDLIFTLKRSSLIQFKTKLDVFLATNTKEDVCD 144

Query: 136 FRVKGSWFERSCTIYAGESSAIIAQMHKKHTVQSILIGKDNFAVTVYPNIDYAFIVALIV 195
           F+VKGSWFERSC +YAGES+ I+AQMHKKHTVQSILIGKDNF VTVYPNIDYAFIVALIV
Sbjct: 145 FKVKGSWFERSCVVYAGESNTIVAQMHKKHTVQSILIGKDNFTVTVYPNIDYAFIVALIV 204

Query: 196 ILDEINH 202
           ILDEIN 
Sbjct: 205 ILDEINE 211

Source: Lotus japonicus

Species: Lotus japonicus

Genus: Lotus

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356568182|ref|XP_003552292.1| PREDICTED: protein LURP-one-related 15-like [Glycine max]

 Score =  307 bits (787), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 141/188 (75%), Positives = 163/188 (86%), Gaps = 1/188 (0%)

Query: 15  AVISPQYCCPYPVDLAIVRKVMTITDGNFVVTDTNGNILFKVKGVFLTFIHQRRVLLDGA 74
           AVI PQ+C PYP+DLA+V+KVMT++DGNFVVTD NGN++FKVKG  +T +  RR+L+D A
Sbjct: 25  AVIGPQFCAPYPLDLAVVKKVMTLSDGNFVVTDVNGNVVFKVKGSLMT-LRDRRILVDAA 83

Query: 75  GNPIVTLREKAMTAHHRWQVFRGESTEPQDLIFSAKTSSVWNVRTKLDVFLANNTKEDVC 134
           GNP+VTLR K MTAH RWQ FRGESTE +DLIF+ K SS+   +TKLDVFLANNTKEDVC
Sbjct: 84  GNPLVTLRRKIMTAHDRWQAFRGESTEAKDLIFTLKRSSLIQFKTKLDVFLANNTKEDVC 143

Query: 135 DFRVKGSWFERSCTIYAGESSAIIAQMHKKHTVQSILIGKDNFAVTVYPNIDYAFIVALI 194
           DF+VKGSW ERSC +YAGES+ I+AQMHKKHTVQSILIGKD F VTVYPNIDYAF+VALI
Sbjct: 144 DFKVKGSWLERSCVVYAGESNNIVAQMHKKHTVQSILIGKDQFMVTVYPNIDYAFVVALI 203

Query: 195 VILDEINH 202
           VILDEIN 
Sbjct: 204 VILDEINE 211

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255637572|gb|ACU19112.1| unknown [Glycine max]

 Score =  302 bits (774), Expect = 6e-80,   Method: Compositional matrix adjust.
 Identities = 139/188 (73%), Positives = 161/188 (85%), Gaps = 1/188 (0%)

Query: 15  AVISPQYCCPYPVDLAIVRKVMTITDGNFVVTDTNGNILFKVKGVFLTFIHQRRVLLDGA 74
           AVI PQ+C  YP+DLA+V+KVMT++DGNFVVTD NGN++FKVKG  +T +  RR+L+D A
Sbjct: 25  AVIGPQFCASYPLDLAVVKKVMTLSDGNFVVTDVNGNVVFKVKGSLMT-LRDRRILVDAA 83

Query: 75  GNPIVTLREKAMTAHHRWQVFRGESTEPQDLIFSAKTSSVWNVRTKLDVFLANNTKEDVC 134
           GNP+VTLR K MT H RWQ FRGESTE +DLIF+ K SS+   +TKLDVFLANNTKEDVC
Sbjct: 84  GNPLVTLRRKIMTTHDRWQAFRGESTEAKDLIFTLKRSSLIQFKTKLDVFLANNTKEDVC 143

Query: 135 DFRVKGSWFERSCTIYAGESSAIIAQMHKKHTVQSILIGKDNFAVTVYPNIDYAFIVALI 194
           DF+VKGSW ERSC +YAGES+ I+AQMHKKHTVQSILIGKD F VTVYPNIDYAF+VALI
Sbjct: 144 DFKVKGSWLERSCVVYAGESNNIVAQMHKKHTVQSILIGKDQFMVTVYPNIDYAFVVALI 203

Query: 195 VILDEINH 202
           VILDEIN 
Sbjct: 204 VILDEINE 211

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356532197|ref|XP_003534660.1| PREDICTED: protein LURP-one-related 15-like [Glycine max]

 Score =  299 bits (766), Expect = 5e-79,   Method: Compositional matrix adjust.
 Identities = 144/187 (77%), Positives = 161/187 (86%), Gaps = 2/187 (1%)

Query: 15  AVISPQYCCPYPVDLAIVRKVMTITDGNFVVTDTNGNILFKVKGVFLTFIHQRRVLLDGA 74
           AVI PQ+C PYPVDLA+V+KVMTI+D NFVVTD NGNI+FKVKG   T +  RRVLLD A
Sbjct: 25  AVIGPQFCAPYPVDLAVVKKVMTISD-NFVVTDVNGNIVFKVKGSLAT-LRDRRVLLDAA 82

Query: 75  GNPIVTLREKAMTAHHRWQVFRGESTEPQDLIFSAKTSSVWNVRTKLDVFLANNTKEDVC 134
           GNP+VTLR K MTAH RWQ FRGEST+ +DLIF+ K SS+   +TKL VFLANNTKEDVC
Sbjct: 83  GNPLVTLRRKIMTAHDRWQAFRGESTDAKDLIFTLKRSSLIQFKTKLHVFLANNTKEDVC 142

Query: 135 DFRVKGSWFERSCTIYAGESSAIIAQMHKKHTVQSILIGKDNFAVTVYPNIDYAFIVALI 194
           DF+VKGSW ERSC +YAGES+ I+AQMHKKHTVQSILIGKD+F VTVYPNIDYAFIVALI
Sbjct: 143 DFKVKGSWLERSCVVYAGESNNIVAQMHKKHTVQSILIGKDHFMVTVYPNIDYAFIVALI 202

Query: 195 VILDEIN 201
           VILDEIN
Sbjct: 203 VILDEIN 209

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255586349|ref|XP_002533824.1| conserved hypothetical protein [Ricinus communis] gi|223526241|gb|EEF28559.1| conserved hypothetical protein [Ricinus communis]

 Score =  298 bits (764), Expect = 9e-79,   Method: Compositional matrix adjust.
 Identities = 140/197 (71%), Positives = 169/197 (85%), Gaps = 3/197 (1%)

Query: 14  VAVISPQYCCPYPVDLAIVRKVMTITDGNFVVTDTNGNILFKVKGVFLTFIHQRRVLLDG 73
           VA+ISPQYC PYPVDLAIVRKV T+ DGNF V D NGNI+FKVK + LTF+H+++++LD 
Sbjct: 17  VAIISPQYCYPYPVDLAIVRKVWTLADGNFDVQDINGNIIFKVKEILLTFLHKKKLILDP 76

Query: 74  AGNPIVTLREKAMTAHHRWQVFRGESTEPQDLIFSAKTSSVWNVRTKLDVFLA-NNTKED 132
           AGN IVTLR KAMTAH RWQVFRGEST+P+D+IF+AKT S++ ++TKLDVFLA NNT E 
Sbjct: 77  AGNTIVTLRRKAMTAHSRWQVFRGESTDPKDVIFTAKTHSIFYLKTKLDVFLANNNTDEK 136

Query: 133 VCDFRVKGSWFERSCTIYAG--ESSAIIAQMHKKHTVQSILIGKDNFAVTVYPNIDYAFI 190
           VCDF+VKGS+FERSC +YAG  +S+ I+AQMHKKH+ QSIL+GK NF VTVYPNIDYAFI
Sbjct: 137 VCDFKVKGSFFERSCVVYAGDEDSTTIVAQMHKKHSAQSILLGKTNFTVTVYPNIDYAFI 196

Query: 191 VALIVILDEINHASSSS 207
           VALIVILD+IN  +  +
Sbjct: 197 VALIVILDDINREAQDA 213

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357506501|ref|XP_003623539.1| hypothetical protein MTR_7g072170 [Medicago truncatula] gi|355498554|gb|AES79757.1| hypothetical protein MTR_7g072170 [Medicago truncatula]

 Score =  293 bits (749), Expect = 5e-77,   Method: Compositional matrix adjust.
 Identities = 135/195 (69%), Positives = 161/195 (82%), Gaps = 1/195 (0%)

Query: 16  VISPQYCCPYPVDLAIVRKVMTITDGNFVVTDTNGNILFKVKGVFLTFIHQRRVLLDGAG 75
           +  PQYC PYP+DLA+V+KV+ I+DGNFVVTD NGNI+FKVK   LTF   RRVL+D A 
Sbjct: 23  IFGPQYCAPYPLDLAVVKKVIAISDGNFVVTDVNGNIVFKVKVSLLTF-RDRRVLVDAAD 81

Query: 76  NPIVTLREKAMTAHHRWQVFRGESTEPQDLIFSAKTSSVWNVRTKLDVFLANNTKEDVCD 135
           NPI TLR K +T H RW+ +RGEST+ +DLIF+ K SS+  ++TKLDVFLANNTKEDVCD
Sbjct: 82  NPITTLRRKIVTMHDRWEAYRGESTDSKDLIFTLKRSSLIQMKTKLDVFLANNTKEDVCD 141

Query: 136 FRVKGSWFERSCTIYAGESSAIIAQMHKKHTVQSILIGKDNFAVTVYPNIDYAFIVALIV 195
           F+VKGSWFERSC +YAGES+ I+AQMHKKHTVQS+LIGKD+F VT+YPN+DYAFIVALIV
Sbjct: 142 FKVKGSWFERSCIVYAGESNNIVAQMHKKHTVQSLLIGKDHFMVTIYPNVDYAFIVALIV 201

Query: 196 ILDEINHASSSSTGG 210
           IL+EIN     S  G
Sbjct: 202 ILNEINADEKGSESG 216

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357506497|ref|XP_003623537.1| hypothetical protein MTR_7g072140 [Medicago truncatula] gi|355498552|gb|AES79755.1| hypothetical protein MTR_7g072140 [Medicago truncatula]

 Score =  290 bits (743), Expect = 2e-76,   Method: Compositional matrix adjust.
 Identities = 135/188 (71%), Positives = 158/188 (84%), Gaps = 1/188 (0%)

Query: 15  AVISPQYCCPYPVDLAIVRKVMTITDGNFVVTDTNGNILFKVKGVFLTFIHQRRVLLDGA 74
           A+   QYC PYPVDLA+V+KVMTI+DGNF VTD NGNI+FKVKG  LT +  RRVL+D A
Sbjct: 22  AIFGQQYCAPYPVDLAVVKKVMTISDGNFAVTDVNGNIVFKVKGSLLT-LRDRRVLVDAA 80

Query: 75  GNPIVTLREKAMTAHHRWQVFRGESTEPQDLIFSAKTSSVWNVRTKLDVFLANNTKEDVC 134
           G PI TLR K MT H RW+ FRGEST+ +DLIF+ K SS+   +TKLDVFLA+N KE+VC
Sbjct: 81  GYPIATLRRKIMTMHDRWEAFRGESTDAKDLIFTLKRSSLIQFKTKLDVFLASNKKENVC 140

Query: 135 DFRVKGSWFERSCTIYAGESSAIIAQMHKKHTVQSILIGKDNFAVTVYPNIDYAFIVALI 194
           DF+VKGSWF+RSC +YAGES+ I+AQMHKK+TVQSILIGKDNF VT+YPN+DYAFIVALI
Sbjct: 141 DFKVKGSWFDRSCIVYAGESNNIVAQMHKKYTVQSILIGKDNFMVTIYPNVDYAFIVALI 200

Query: 195 VILDEINH 202
           VILDEIN 
Sbjct: 201 VILDEINR 208

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357506493|ref|XP_003623535.1| hypothetical protein MTR_7g072120 [Medicago truncatula] gi|355498550|gb|AES79753.1| hypothetical protein MTR_7g072120 [Medicago truncatula] gi|388494416|gb|AFK35274.1| unknown [Medicago truncatula]

 Score =  290 bits (743), Expect = 2e-76,   Method: Compositional matrix adjust.
 Identities = 134/188 (71%), Positives = 157/188 (83%), Gaps = 1/188 (0%)

Query: 15  AVISPQYCCPYPVDLAIVRKVMTITDGNFVVTDTNGNILFKVKGVFLTFIHQRRVLLDGA 74
           A+  PQYC PYPVDLA+V+KVMTI+DGNF VTD NGNI+FKVKG  LT +  RRVLLD A
Sbjct: 22  AIFGPQYCAPYPVDLAVVKKVMTISDGNFAVTDVNGNIVFKVKGSLLT-LRDRRVLLDAA 80

Query: 75  GNPIVTLREKAMTAHHRWQVFRGESTEPQDLIFSAKTSSVWNVRTKLDVFLANNTKEDVC 134
           GNPI TLR K +T H RW+ +RGEST  +DLIF+ K SS+  ++TKLDVFLA NTKEDVC
Sbjct: 81  GNPITTLRRKIVTMHDRWEAYRGESTHAKDLIFTLKRSSLIQMKTKLDVFLAGNTKEDVC 140

Query: 135 DFRVKGSWFERSCTIYAGESSAIIAQMHKKHTVQSILIGKDNFAVTVYPNIDYAFIVALI 194
           DF+V+GSW ERSC +YAGES+ I+AQMHKKHTV SIL+ KD+F+VTVYPN+DYAFIVALI
Sbjct: 141 DFKVRGSWLERSCIVYAGESNNIVAQMHKKHTVTSILMDKDHFSVTVYPNVDYAFIVALI 200

Query: 195 VILDEINH 202
           VILDE N 
Sbjct: 201 VILDETNE 208

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356496281|ref|XP_003516997.1| PREDICTED: protein LURP-one-related 15-like [Glycine max]

 Score =  290 bits (743), Expect = 3e-76,   Method: Compositional matrix adjust.
 Identities = 138/199 (69%), Positives = 161/199 (80%), Gaps = 10/199 (5%)

Query: 3   QQPSLIGGGAAVAVISPQYCCPYPVDLAIVRKVMTITDGNFVVTDTNGNILFKVKGVFLT 62
           QQPS         +I+P+YC PY VDLAIVRKV+ +TD  F VTD NG I+F +K   +T
Sbjct: 4   QQPS--------GIINPKYCAPYNVDLAIVRKVLALTDS-FTVTDVNGQIVFSLKASLMT 54

Query: 63  FIHQRRVLLDGAGNPIVTLREKAMTAHHRWQVFRGESTEPQDLIFSAKTSSVWNVRTKLD 122
            +H  RVLLD AG P+VTLR K M+AH RWQ+FRGESTEP+DLIFS K SS + ++TKLD
Sbjct: 55  -LHDHRVLLDAAGEPVVTLRRKLMSAHDRWQIFRGESTEPKDLIFSVKRSSFFQLKTKLD 113

Query: 123 VFLANNTKEDVCDFRVKGSWFERSCTIYAGESSAIIAQMHKKHTVQSILIGKDNFAVTVY 182
           VFLANNTKE+VCDF+VKGSWFERSC +YAGES  I+AQMHKKHTVQSI+ GKDNF VTVY
Sbjct: 114 VFLANNTKEEVCDFKVKGSWFERSCVVYAGESLNIVAQMHKKHTVQSIVFGKDNFMVTVY 173

Query: 183 PNIDYAFIVALIVILDEIN 201
           PNIDYAFIVALI+ILDEI+
Sbjct: 174 PNIDYAFIVALILILDEIH 192

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	225
TAIR|locus:2181082	217	AT5G01750 "AT5G01750" [Arabido	0.835	0.866	0.649	2.1e-68
TAIR|locus:2081481	194	AT3G11740 "AT3G11740" [Arabido	0.831	0.963	0.608	2.3e-62
TAIR|locus:2055250	207	LURP1 "AT2G14560" [Arabidopsis	0.817	0.888	0.551	2.4e-51
TAIR|locus:2086062	185	AT3G16900 "AT3G16900" [Arabido	0.795	0.967	0.400	1.6e-31
TAIR|locus:2078506	204	AT3G56180 "AT3G56180" [Arabido	0.822	0.906	0.378	6.9e-31
TAIR|locus:4515103053	197	AT3G10986 "AT3G10986" [Arabido	0.835	0.954	0.302	2.3e-23
TAIR|locus:2093242	220	AT3G15810 "AT3G15810" [Arabido	0.808	0.827	0.294	2.5e-19
TAIR|locus:2016299	210	AT1G80120 "AT1G80120" [Arabido	0.733	0.785	0.304	1.8e-16
TAIR|locus:2065753	182	AT2G30270 "AT2G30270" [Arabido	0.702	0.868	0.265	6.9e-15
TAIR|locus:2180459	215	AT5G20640 "AT5G20640" [Arabido	0.817	0.855	0.275	7.9e-14

TAIR|locus:2181082 AT5G01750 "AT5G01750" [Arabidopsis thaliana (taxid:3702)]

 Score = 694 (249.4 bits), Expect = 2.1e-68, P = 2.1e-68
 Identities = 124/191 (64%), Positives = 159/191 (83%)

Query:    12 AAVAVISPQYCCPYPVDLAIVRKVMTITDGNFVVTDTNGNILFKVKG-VFLTFIHQRRVL 70
             A   V+ P+YC PYP+D+AIVRK+M++TDGNFV+TD NGN+LFKVK  VF   +H +RVL
Sbjct:    23 AGGVVVDPKYCAPYPIDMAIVRKMMSLTDGNFVITDVNGNLLFKVKEPVF--GLHDKRVL 80

Query:    71 LDGAGNPIVTLREKAMTAHHRWQVFRGESTEPQDLIFSAKTSSVWNVRTKLDVFLANNTK 130
             LDG+G P+VTLREK ++ H RWQVFRG ST+ +DL+++ K SS+  ++TKLDVFL +N  
Sbjct:    81 LDGSGTPVVTLREKMVSMHDRWQVFRGGSTDQRDLLYTVKRSSMLQLKTKLDVFLGHNKD 140

Query:   131 EDVCDFRVKGSWFERSCTIYAGESSAIIAQMHKKHTVQSILIGKDNFAVTVYPNIDYAFI 190
             E  CDFRVKGSW ERSC +YAGES AI+AQMH+KHTVQS+ +GKDNF+VTVYPN+DYAFI
Sbjct:   141 EKRCDFRVKGSWLERSCVVYAGESDAIVAQMHRKHTVQSVFLGKDNFSVTVYPNVDYAFI 200

Query:   191 VALIVILDEIN 201
              +L+VILD++N
Sbjct:   201 ASLVVILDDVN 211

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0009507 "chloroplast" evidence=IDA

GO:0006569 "tryptophan catabolic process" evidence=RCA

GO:0006995 "cellular response to nitrogen starvation" evidence=RCA

GO:0009684 "indoleacetic acid biosynthetic process" evidence=RCA

GO:0030003 "cellular cation homeostasis" evidence=RCA

GO:0070838 "divalent metal ion transport" evidence=RCA

TAIR|locus:2081481 AT3G11740 "AT3G11740" [Arabidopsis thaliana (taxid:3702)]

 Score = 637 (229.3 bits), Expect = 2.3e-62, P = 2.3e-62
 Identities = 115/189 (60%), Positives = 151/189 (79%)

Query:    14 VAVISPQYCCPYPVDLAIVRKVMTITDGNFVVTDTNGNILFKVKGVFLTFIHQRRVLLDG 73
             +A++SP +C PYP++L IVRKVMT+TDGNF VTD NGN+LFKVK    + I  +R+LLD 
Sbjct:     1 MAIVSPNFCAPYPIELGIVRKVMTLTDGNFAVTDVNGNLLFKVKEPLFS-ISDKRILLDA 59

Query:    74 AGNPIVTLREKAMTAHHRWQVFRGESTEPQDLIFSAKTSSVWNV-RTKLDVFLANNTKED 132
                PI+TLRE  ++ H RW V+RG+ST+  DL+++ K SS+  + + KLD+FLA+N +  
Sbjct:    60 YDTPILTLRENKVSLHDRWLVYRGKSTDQSDLLYTLKRSSMIQIMKPKLDIFLAHNKEMK 119

Query:   133 VCDFRVKGSWFERSCTIYAGESSAIIAQMHKKHTVQSILIGKDNFAVTVYPNIDYAFIVA 192
             +CDF VKGSW +RSC +YAG+S AI+AQMHKKHT QSILIGK NF+VTVYPN+D+AFIV+
Sbjct:   120 ICDFHVKGSWIDRSCVVYAGKSDAIVAQMHKKHTAQSILIGKSNFSVTVYPNVDFAFIVS 179

Query:   193 LIVILDEIN 201
             LIVILD+IN
Sbjct:   180 LIVILDDIN 188

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2055250 LURP1 "AT2G14560" [Arabidopsis thaliana (taxid:3702)]

 Score = 533 (192.7 bits), Expect = 2.4e-51, P = 2.4e-51
 Identities = 102/185 (55%), Positives = 134/185 (72%)

Query:    16 VISPQYCCPYPVDLAIVRKVMTITDGNFVVTDTNGNILFKVKGVFLTFIHQRRVLLDGAG 75
             ++  +YC P PV LAIVRKVM ITDGNFV+T  +G +LFKVK    + +H +R+LLD +G
Sbjct:     7 IVGSKYCSPNPVGLAIVRKVMKITDGNFVITSADGKLLFKVKDPLFS-LHGKRILLDCSG 65

Query:    76 NPIVTLREKAMTAHHRWQVFRGESTEPQDLIFSAKTSSVWNVRTKLDVFLANNTKEDVCD 135
               ++TLR K MT H RWQVFRG STE   L+++ K SS+  +  KL+VFLANN +E +CD
Sbjct:    66 AKVLTLRGKMMTMHDRWQVFRGGSTEEGALLYTVKRSSMIQLAPKLEVFLANNVEEKICD 125

Query:   136 FRVKGSWFERSCTIYAGESSAIIAQMHKKHTVQSILIGKDNFAVTVYPNIDYAFIVALIV 195
             F+VKG+W + SC +YAG+S  IIA M  K T++    GKD+F+VTV  N+DYAFI +LIV
Sbjct:   126 FKVKGAWLDDSCVVYAGDSDTIIAHMCGKQTMRGFFFGKDHFSVTVDKNVDYAFIASLIV 185

Query:   196 ILDEI 200
             IL EI
Sbjct:   186 ILVEI 190

GO:0003674 "molecular_function" evidence=ND

GO:0009751 "response to salicylic acid stimulus" evidence=IEP

GO:0050832 "defense response to fungus" evidence=RCA;IMP

GO:0000165 "MAPK cascade" evidence=RCA

GO:0006612 "protein targeting to membrane" evidence=RCA

GO:0009595 "detection of biotic stimulus" evidence=RCA

GO:0009697 "salicylic acid biosynthetic process" evidence=RCA

GO:0009862 "systemic acquired resistance, salicylic acid mediated signaling pathway" evidence=RCA

GO:0009867 "jasmonic acid mediated signaling pathway" evidence=RCA

GO:0010200 "response to chitin" evidence=RCA

GO:0010310 "regulation of hydrogen peroxide metabolic process" evidence=RCA

GO:0010363 "regulation of plant-type hypersensitive response" evidence=RCA

GO:0031348 "negative regulation of defense response" evidence=RCA

GO:0042742 "defense response to bacterium" evidence=RCA

GO:0043069 "negative regulation of programmed cell death" evidence=RCA

GO:0043900 "regulation of multi-organism process" evidence=RCA

GO:0045088 "regulation of innate immune response" evidence=RCA

TAIR|locus:2086062 AT3G16900 "AT3G16900" [Arabidopsis thaliana (taxid:3702)]

 Score = 346 (126.9 bits), Expect = 1.6e-31, P = 1.6e-31
 Identities = 81/202 (40%), Positives = 120/202 (59%)

Query:     1 MAQQPSLIGGGAAVAVISPQYCCPYPVDLAIVRKVMTITDGNFVVTDTNGNILFKVKGVF 60
             MA+Q         + ++  ++  P P+DL       TIT G+  V D  GN +FKVK   
Sbjct:     1 MAKQDPT-SSNTMLPLVGSEFVRPQPLDL-------TIT-GD-TVKDATGNKVFKVKTP- 49

Query:    61 LTFIHQRRVLLDGAGNPIVTLREKAMTAHHRWQVFRGESTEPQDLIFSAKTSSVWNVRTK 120
             L  +H +R+L+D   +PIVT++ K  + H RWQV+RG   +  D IF+ K SS   ++T+
Sbjct:    50 LFGLHNKRILVDPNDSPIVTMKMKVTSKHDRWQVYRGSDLD--DKIFTVKRSSTVQLKTR 107

Query:   121 LDVFLANN-TKEDVCDFRVKGSWFERSCTIYAGESSAIIAQMHKKHTVQSILIGKDNFAV 179
             ++VFL +N T+E  CDF +KG + +R+CTIY  +S+ IIAQ+++ H         +    
Sbjct:   108 VEVFLKHNQTRESSCDFTIKGRFMKRACTIYVADSTKIIAQVYEGH---------ERLVA 158

Query:   180 TVYPNIDYAFIVALIVILDEIN 201
             T+YPN+DYAFIV LI I D IN
Sbjct:   159 TIYPNVDYAFIVTLIFIFDLIN 180

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2078506 AT3G56180 "AT3G56180" [Arabidopsis thaliana (taxid:3702)]

 Score = 340 (124.7 bits), Expect = 6.9e-31, P = 6.9e-31
 Identities = 73/193 (37%), Positives = 120/193 (62%)

Query:    10 GGAAVAVISPQYCCPYPVDLAIVRKVMTITDGNFVVTDTNGNILFKVKGVFLTFIHQRRV 69
             G  A++V+S Q+C PYP+DL + RKV   +   + V D +GN+L ++ G    F +++RV
Sbjct:    12 GDPAISVVSDQFCNPYPMDLLVKRKVQNFSKDYYEVFDPSGNLLLQIDGQAWGF-NRKRV 70

Query:    70 LLDGAGNPIVTLREKAMTAHHRWQVFRGESTEPQDLIFSAKTSSVWNVRTKLDVFLA--N 127
             + D AG  I+++R+K +   ++W+V  GES E +DL+F+ + S   +++T +DVFL   N
Sbjct:    71 MRDPAGFTILSMRQKGLALKNKWEVHGGESKEREDLLFTVQQSQAVSLKTSVDVFLPENN 130

Query:   128 NTKE-DVCDFRVKGSWFERSCTIYAGESSAIIAQMHKKHTVQSILIGKDNFAVTVYPNID 186
             N K+ + CDF   G +   S  ++  ++ A+IA +    T  S   GK NF V V P +D
Sbjct:   131 NVKKTNTCDFHASGGYSNISFKVF--KADALIAGVG--FTWGSFCKGKYNFKVRVNPEVD 186

Query:   187 YAFIVALIVILDE 199
             YAFI+AL+V++D+
Sbjct:   187 YAFIIALLVMVDD 199

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:4515103053 AT3G10986 "AT3G10986" [Arabidopsis thaliana (taxid:3702)]

 Score = 269 (99.8 bits), Expect = 2.3e-23, P = 2.3e-23
 Identities = 59/195 (30%), Positives = 112/195 (57%)

Query:    14 VAVISPQYCCPYPVDLAIVRKVMTITDGNFVVTDTNGNILFKVKGVFLTFIHQRRVLLDG 73
             V+V+   +C PY  +L + R+  ++    + V D + N++F V G     I ++RVL D 
Sbjct:     2 VSVVGEMFCNPYTTELVVRRRRESLKRERYDVFDLSNNLIFTVDGGIWN-IRRKRVLRDA 60

Query:    74 AGNPIVTLREKAMTA-HHRWQVFRGESTEPQDLIFSAKTSSVWNVRTKLDVFLA-NNTKE 131
             AG P++++R K +    + W+V++G+STE  +L+FSA+  ++ + +T LDV L  + +  
Sbjct:    61 AGIPLLSMRTKGLVPMRYNWEVYKGDSTESDNLLFSAREPNLLSFKTSLDVTLPPDQSST 120

Query:   132 DVC----DFRVKGSWFERSCTIYAGESSAIIAQMHKKHTVQSILIGKDNFAVTVYPNIDY 187
             D+     DF+  G +   S  ++    + ++A++    T   ++ G  +F V V P +D+
Sbjct:   121 DISSVEPDFQTFGRYIGSSFKLFEPIHNTLLAEVVHDFTWGGLIKGSYSFKVRVNPYVDF 180

Query:   188 AFIVALIVILDEINH 202
             AF+VAL+VI D+ ++
Sbjct:   181 AFVVALLVITDDTSN 195

GO:0003674 "molecular_function" evidence=ND

GO:0005739 "mitochondrion" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2093242 AT3G15810 "AT3G15810" [Arabidopsis thaliana (taxid:3702)]

 Score = 231 (86.4 bits), Expect = 2.5e-19, P = 2.5e-19
 Identities = 55/187 (29%), Positives = 94/187 (50%)

Query:    16 VISPQYCCPYPVDLAIVRKVMTITDGNFVVTDTNGNILFKVKGVFL-TFIHQRRVLLDGA 74
             V+   Y       L + +  +  T   F   D  G+I+F+V      T  +   VL+D  
Sbjct:    20 VVDKAYLYQEDKPLTVCKTSLFYTGDGFAAYDCRGDIIFRVDSYGPDTRDNDEIVLMDAT 79

Query:    75 GNPIVTLREKAMTAHHRWQVFRGESTEPQDLIFSAKTSSVWNVRTKLDVFLANNTKEDVC 134
             G  ++T++ K  T H RW+ F GE +E Q  IFS + SS+   R  ++V + + T E+  
Sbjct:    80 GKCLLTVKRKRPTLHQRWEGFLGERSEGQKPIFSVRRSSIIG-RCTMEVEVYDGTGEE-- 136

Query:   135 DFRVKGSWFERSCTIYAGESSAIIAQMHKKHTVQSILIGKDNFAVTVYPNIDYAFIVALI 194
              + + G + +RSC IY  +   +     K     ++++G+D F + + P  D AF + L+
Sbjct:   137 -YIIDGDFSQRSCLIYDTKKCTVAEIKRKVDASTNVMLGRDVFTLEIKPGFDGAFAMGLV 195

Query:   195 VILDEIN 201
             V+LD+IN
Sbjct:   196 VVLDQIN 202

GO:0003674 "molecular_function" evidence=ND

GO:0005737 "cytoplasm" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2016299 AT1G80120 "AT1G80120" [Arabidopsis thaliana (taxid:3702)]

 Score = 204 (76.9 bits), Expect = 1.8e-16, P = 1.8e-16
 Identities = 53/174 (30%), Positives = 95/174 (54%)

Query:    32 VRKVMTITDGN-FVVTDTNGNILFKVK--GVFLTFIHQRRVLLDGAGNPIVTLREKAMTA 88
             VRK      G+ F V D  G+++F+V   G   T      VL+D  G  ++TLR K  + 
Sbjct:    21 VRKTSLFFAGDGFTVYDCKGSLVFRVDSYGGPNTRDTDEVVLMDAHGRCLLTLRRKRPSL 80

Query:    89 HHRWQVFRGESTEPQDLIFSAKTSSVWNVRTKLDVFLANNTKEDVC-DFRVKGSWFERSC 147
               RW+ + GE ++ Q  IF  + SS+   R  + V +  + +   C ++ ++GS+  R+C
Sbjct:    81 RRRWEGYLGERSDGQKPIFGVRRSSIIG-RNSVTVEVYGDYQ---CSEYLIEGSFGARNC 136

Query:   148 TIYAGESSAIIAQMHKKHTVQS-ILIGKDNFAVTVYPNIDYAFIVALIVILDEI 200
             T+   E+   +A++ +K    + +++GKD F++ V P  D AF + L+++LD+I
Sbjct:   137 TVVEAETRRKVAEIRRKVDASTNVMLGKDVFSLNVKPGFDGAFAMGLVLVLDQI 190

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2065753 AT2G30270 "AT2G30270" [Arabidopsis thaliana (taxid:3702)]

 Score = 189 (71.6 bits), Expect = 6.9e-15, P = 6.9e-15
 Identities = 46/173 (26%), Positives = 100/173 (57%)

Query:    26 PVDLAIVRKVMTITDGNFVVTDTNGNILFKVKGVFLTFIHQRRVLLDGAGNPIVTLREKA 85
             PVDL   +K+  ++ G+    D++ +++F ++    +     + LLD +G P+ ++    
Sbjct:    19 PVDLFASKKLPGLSSGDLGFADSSEHLVFILRKSSSSL----KSLLDSSGVPLFSISR-- 72

Query:    86 MTAHHR-WQVFRGESTEPQDLIFSAKTSSVWNVRTKLDVFLANNTKEDVCDFRVKGSWFE 144
                H+  W++ +G+  + +DL+ + K +S    +T+ +V  A  + E++    +KG  F+
Sbjct:    73 --LHNGVWELHKGDVEKRKDLVLTVKRTSKRFSKTESEVSFAGESSENLV---IKGVPFQ 127

Query:   145 RSCTIYAGESSAIIAQMHKKHTVQSILIGKDNFAVTVYP-NIDYAFIVALIVI 196
             +SCTIY+ +S  I+AQ    + ++ I +G+  F +T++P +ID++ +VA++ I
Sbjct:   128 KSCTIYSQDS--IVAQTSLMYKLRQIYVGRSKFRLTIFPGSIDHSLVVAMVAI 178

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0005886 "plasma membrane" evidence=IDA

GO:0006863 "purine nucleobase transport" evidence=RCA

TAIR|locus:2180459 AT5G20640 "AT5G20640" [Arabidopsis thaliana (taxid:3702)]

 Score = 179 (68.1 bits), Expect = 7.9e-14, P = 7.9e-14
 Identities = 55/200 (27%), Positives = 101/200 (50%)

Query:    16 VISPQYCCPYPVDLAIVRKVMTITDGNFVVTDTNGNILFKVKGVFLTFIHQRRVLLDGAG 75
             V+S +Y       L + R+   +  G FVV+++   ++F+V G  +     + +L +G G
Sbjct:    12 VLSRRYSSESETVLVVRRRPPMVNGGGFVVSNSKQVVVFRVDGCGVLGTKGKLLLRNGDG 71

Query:    76 NPIVTLRE-----KAMT-AHHRWQVFRGESTEPQDLIFSAKTSS----VWNVRTKLDVF- 124
             N ++ +R+     +A+   H++W+ F  ++   + L+F+ K       V N   K+ V  
Sbjct:    72 NDLLLIRKMGGIVQALNMVHNKWEGFGYDNEGTERLVFTLKDPKDSCLVQNSSIKILVHG 131

Query:   125 ---LANNTKEDVCDFRVKGSWFERSCTIYAGESSAIIAQMHKKHTVQSILIGKDNFAVTV 181
                  ++T+ +  +  +KGS+ ER+C I   +  AI     +K   + +   KD + V V
Sbjct:   132 KPPKISSTRNNYVE--IKGSFAERACNIMDSDGKAIAKVRIEKEMEEMVGNKKDLYHVIV 189

Query:   182 YPNIDYAFIVALIVILDEIN 201
              PN+D +FIV LI ILD I+
Sbjct:   190 KPNVDQSFIVGLIAILDYIH 209

GO:0003674 "molecular_function" evidence=ND

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q9LZX1	LOR15_ARATH	No assigned EC number	0.6108	0.8844	0.9170	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	225
pfam04525	185	pfam04525, Tub_2, Tubby C 2	2e-61
COG4894	159	COG4894, COG4894, Uncharacterized conserved protei	2e-06

>gnl|CDD|218129 pfam04525, Tub_2, Tubby C 2

 Score =  190 bits (484), Expect = 2e-61
 Identities = 77/187 (41%), Positives = 118/187 (63%), Gaps = 8/187 (4%)

Query: 15  AVISPQYCCPYPVDLAIVRKVMTITDGNFVVTDTNGNILFKVKGVFLTFIHQRRVLLDGA 74
            V+S +Y  P P DL + RK +      F V D+NGN++F+V G         RVL+D +
Sbjct: 2   VVVSSEYLSPEPEDLTVWRKSLVFNGDGFTVYDSNGNLVFRVDGYAFGL-SDERVLMDSS 60

Query: 75  GNPIVTLREKAMTAHHRWQVFRGESTEPQDLIFSAKTSSVWNVRTKLDVFLANNT----- 129
           GNP++T+R K ++ H RW+V+RGE TE +D +F+ + SS+  ++T   VF   N+     
Sbjct: 61  GNPLLTIRRKKLSLHDRWEVYRGEGTEGKDPLFTVRRSSIVQLKTSSSVFSKRNSNVIVD 120

Query: 130 KEDVCDFRVKGSWFERSCTIYAGESSAIIAQMHKKHTVQSILIGKDNFAVTVYPNIDYAF 189
            E  CDF +KGS+ +RSC IY  +S  +IA++ K+ T + + +GKD + VTV P +DYAF
Sbjct: 121 DEKNCDFDIKGSFLDRSCKIYD-DSDKLIAEV-KRQTSKGVFLGKDVYTVTVKPEVDYAF 178

Query: 190 IVALIVI 196
           I+AL+V+
Sbjct: 179 IMALVVV 185

The structure of this family has been solved. It comprises a 12-stranded beta barrel with a central C-terminal alpha helix. This helix is thought to be a transmembrane helix. It is structurally similar to the C-terminal domain of the Tubby protein. In plants it plays a role in defense against pathogens. Length = 185

>gnl|CDD|227231 COG4894, COG4894, Uncharacterized conserved protein [Function unknown]

 Score = 45.5 bits (108), Expect = 2e-06
 Identities = 38/172 (22%), Positives = 78/172 (45%), Gaps = 22/172 (12%)

Query: 31  IVRKVMTITDGNFVVTDTNGNILFKVKGVFLTFIHQRRVLLDGAGNPIVTLREKAMTAHH 90
            +++ M      F + D +G   FKV+G F + I     + D +G  +V++ +K ++   
Sbjct: 9   FMKQKMFSFGDAFHIYDRDGEEAFKVEGSFFS-IGDTLTITDASGKTLVSIEQKLLSLLP 67

Query: 91  RWQVFRGESTEPQDLIFSAKTSSVWNVRTKLDVFLANNTKEDVCDFRVKGSWFERSCTIY 150
           R+++  G  T             V  VR K+  F  +  + D  ++ + G+ ++    + 
Sbjct: 68  RYEISDGGGT-------------VCEVRKKV-TFSRDKFEIDGLNWEIHGNIWDDEFKLT 113

Query: 151 AGESSAIIAQMHKKHTVQSILIGKDNFAVTVYPNIDYAFIVALIVILDEINH 202
            GE+  + A++ KK         +D + + V P+ D   I+A+ V LD + +
Sbjct: 114 DGEN--VRAEVSKK-----WFSWRDTYHLQVAPDEDALLIIAIAVALDMVLY 158

Length = 159

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	225
PF04525	187	Tub_2: Tubby C 2; InterPro: IPR007612 This is a fa	100.0
COG4894	159	Uncharacterized conserved protein [Function unknow	100.0
PF03803	221	Scramblase: Scramblase ; InterPro: IPR005552 Scram	99.77
COG4894	159	Uncharacterized conserved protein [Function unknow	98.71
KOG0621	292	consensus Phospholipid scramblase [Cell wall/membr	98.67
PF04525	187	Tub_2: Tubby C 2; InterPro: IPR007612 This is a fa	98.12
PF03803	221	Scramblase: Scramblase ; InterPro: IPR005552 Scram	97.01

>PF04525 Tub_2: Tubby C 2; InterPro: IPR007612 This is a family of plant and bacterial uncharacterised proteins

Probab=100.00  E-value=1.4e-41  Score=279.57  Aligned_cols=180  Identities=36%  Similarity=0.750  Sum_probs=110.0

Q ss_pred             EEeCCCccCCcCeEEEEEeeeeeEeCCCEEEEcCCCCEEEEEEc-cCCCcccceEEEEcCCCCcEEEEEeccccccceEE
Q 027334           15 AVISPQYCCPYPVDLAIVRKVMTITDGNFVVTDTNGNILFKVKG-VFLTFIHQRRVLLDGAGNPIVTLREKAMTAHHRWQ   93 (225)
Q Consensus        15 ~vv~~~~~~~~~~~l~vk~k~~s~~~~~f~V~D~~G~~vf~V~g-~~~s~~~~~~~l~D~~G~~L~~I~~k~~s~~~~~~   93 (225)
                      +||+++||+++|++|+||+|.+++++++|+|+|++|+++|+|+| ++++ +++++.|+|++|+||++|++|.++++++|+
T Consensus         2 ~vv~~~~~~~~~~~l~v~~k~~~~~~~~f~V~D~~G~~vf~V~g~~~~s-~~~~~~l~D~~G~~L~~i~~k~~~l~~~w~   80 (187)
T PF04525_consen    2 VVVDAQYCSPQPVTLTVKKKSLSFSGDDFTVYDENGNVVFRVDGGKFFS-IGKKRTLMDASGNPLFTIRRKLFSLRPTWE   80 (187)
T ss_dssp             -SS-GGGB-SS-EEEEEE----------EEEEETTS-EEEEEE--SCTT-BTTEEEEE-TTS-EEEEEE--------EEE
T ss_pred             cEECHHHcCCCceEEEEEEEEeeecCCCEEEEcCCCCEEEEEEEecccC-CCCEEEEECCCCCEEEEEEeeecccceEEE
Confidence            46799999999999999999888877799999999999999999 8999 999999999999999999999999999999


Q ss_pred             EEEcCCCCCCceEEEEEecceecccceEEEEEcCCC-----CCceeeEEEEeeeeceeEEEEeCCCCceeEEEEeeeece
Q 027334           94 VFRGESTEPQDLIFSAKTSSVWNVRTKLDVFLANNT-----KEDVCDFRVKGSWFERSCTIYAGESSAIIAQMHKKHTVQ  168 (225)
Q Consensus        94 i~~~~~~~~~~~i~tikk~~~~~~k~~~~V~~~~~~-----~~~~~~~~v~G~~~~~~~~I~~~~~~~~VA~V~kk~~~~  168 (225)
                      +|++++.+..+++|+||+.+.+..++++.+++....     +++.++|+|+|||++++|+|++.+ |+.||+|+||+..+
T Consensus        81 i~~~~~~~~~~~i~tvkk~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~i~G~~~~~~~~I~~~~-g~~VA~i~rk~~~k  159 (187)
T PF04525_consen   81 IYRGGGSEGKKPIFTVKKKSMLQNKDSFDVFLPPKSNISIDDSEGPDFEIKGNFWDRSFTIYDSG-GRVVAEISRKYSSK  159 (187)
T ss_dssp             EEETT---GGGEEEEEE----------EEEEET--T----------SEEEES-TTTT--EEEECC---EEEEEEE-----
T ss_pred             EEECCCCccCceEEEEEEecccCCCcceeEEEecccceeecCCCCceEEEEEEecCcEEEEEEcC-CCEEEEEeccccee
Confidence            999997544568999998866667788888887432     246789999999999999999532 89999999988888


Q ss_pred             eeeeeeceEEEEEeCCCcHHHHHHHHHH
Q 027334          169 SILIGKDNFAVTVYPNIDYAFIVALIVI  196 (225)
Q Consensus       169 ~~~~~~d~Y~l~V~pg~D~~lvlalvii  196 (225)
                      .|+.++|+|.|+|+||+|++|++|||+|
T Consensus       160 ~~~~~~dty~l~V~pg~D~~lv~alvvi  187 (187)
T PF04525_consen  160 KWFSGRDTYTLTVAPGVDQALVVALVVI  187 (187)
T ss_dssp             -----B-SEEEEE-TTSBHHHHHHHHHH
T ss_pred             eEEecCcEEEEEEcCCCCHHHheeEEeC
Confidence            8999999999999999999999999986

; PDB: 1ZXU_A 2Q4M_A.

>COG4894 Uncharacterized conserved protein [Function unknown]

Probab=100.00  E-value=4.2e-36  Score=230.68  Aligned_cols=155  Identities=23%  Similarity=0.446  Sum_probs=142.3

Q ss_pred             CeEEEEEeeeeeEeCCCEEEEcCCCCEEEEEEccCCCcccceEEEEcCCCCcEEEEEeccccccceEEEEEcCCCCCCce
Q 027334           26 PVDLAIVRKVMTITDGNFVVTDTNGNILFKVKGVFLTFIHQRRVLLDGAGNPIVTLREKAMTAHHRWQVFRGESTEPQDL  105 (225)
Q Consensus        26 ~~~l~vk~k~~s~~~~~f~V~D~~G~~vf~V~g~~~s~~~~~~~l~D~~G~~L~~I~~k~~s~~~~~~i~~~~~~~~~~~  105 (225)
                      ..+|.|+||+.++++ +|.|+|++|+.+|+|+|+.++ ++++++|+|++|.+|.+|++|.++++|+|+|.++++     .
T Consensus         5 ~~tl~mkQk~~~~gd-~f~I~d~dgE~af~VeGs~f~-i~dtlti~Da~G~~l~~i~~kll~l~~~yeI~d~~g-----~   77 (159)
T COG4894           5 MITLFMKQKMFSFGD-AFHIYDRDGEEAFKVEGSFFS-IGDTLTITDASGKTLVSIEQKLLSLLPRYEISDGGG-----T   77 (159)
T ss_pred             hHhHhhhhhhhhccc-ceEEECCCCcEEEEEeeeEEe-eCceEEEEecCCCChHHHHHHHhhccceeEEEcCCC-----C
Confidence            357899999999988 999999999999999999999 999999999999999999999999999999999986     4


Q ss_pred             EEEEEecceecccceEEEEEcCCCCCceeeEEEEeeeeceeEEEEeCCCCceeEEEEeeeeceeeeeeeceEEEEEeCCC
Q 027334          106 IFSAKTSSVWNVRTKLDVFLANNTKEDVCDFRVKGSWFERSCTIYAGESSAIIAQMHKKHTVQSILIGKDNFAVTVYPNI  185 (225)
Q Consensus       106 i~tikk~~~~~~k~~~~V~~~~~~~~~~~~~~v~G~~~~~~~~I~~~~~~~~VA~V~kk~~~~~~~~~~d~Y~l~V~pg~  185 (225)
                      ++.++|+ +..+++++.+        +..+|+++||+|+.+|++.+|  ++.+|+|+||     |++++|+|.|+|+|+.
T Consensus        78 ~~~vrKK-~tf~Rdk~e~--------d~~~~eihGNi~d~efkl~dg--~~~~aeVsKk-----wf~~rdTY~l~vapde  141 (159)
T COG4894          78 VCEVRKK-VTFSRDKFEI--------DGLNWEIHGNIWDDEFKLTDG--ENVRAEVSKK-----WFSWRDTYHLQVAPDE  141 (159)
T ss_pred             EEEEEEE-EEEEeeeEEE--------cCCCeEEecceeceEEEEecC--Cceehhheee-----eEeccceEEEEEcCch
Confidence            8888876 4456888877        345699999999999999999  6799999999     8999999999999999


Q ss_pred             cHHHHHHHHHHhhhhhhc
Q 027334          186 DYAFIVALIVILDEINHA  203 (225)
Q Consensus       186 D~~lvlalviiiD~~~~~  203 (225)
                      |..+|+++|+++|++.++
T Consensus       142 ~a~lii~i~VaLD~v~~~  159 (159)
T COG4894         142 DALLIIAIAVALDMVLYN  159 (159)
T ss_pred             hhHHHHHHHHHHHHHhcC
Confidence            999999999999999763

>PF03803 Scramblase: Scramblase ; InterPro: IPR005552 Scramblase is palmitoylated and contains a potential protein kinase C phosphorylation site

Probab=99.77  E-value=8.4e-17  Score=135.31  Aligned_cols=168  Identities=18%  Similarity=0.268  Sum_probs=133.5

Q ss_pred             CeEEEEEeeeeeE-------eCCCEEEEcCCCCEEEEEEccCC--------CcccceEEEEcCCCCcEEEEEeccccc--
Q 027334           26 PVDLAIVRKVMTI-------TDGNFVVTDTNGNILFKVKGVFL--------TFIHQRRVLLDGAGNPIVTLREKAMTA--   88 (225)
Q Consensus        26 ~~~l~vk~k~~s~-------~~~~f~V~D~~G~~vf~V~g~~~--------s~~~~~~~l~D~~G~~L~~I~~k~~s~--   88 (225)
                      --+++|+|+...+       ..+.|.|+|.+|+.+|.+....-        +..+-++.|+|..|+++++|+|+.-..  
T Consensus        21 ~~~l~I~Q~~e~~e~~~~~e~~N~Y~I~n~~g~~i~~~~E~s~~~~R~~~~~~R~f~~~i~D~~g~~vl~i~Rp~~c~~C  100 (221)
T PF03803_consen   21 LDQLLIKQQIEPLEIFTGFETPNRYDIKNPNGQQIYYAVEESDCCSRQCCGSHRPFKMHIYDNYGREVLTIERPFKCCSC  100 (221)
T ss_pred             CCEEEEEEEEEEeceecccccCceEEEECCCCCEEEEEEEeCcceeeeecCCCCCEEEEEEecCCCEEEEEEcCCcceec
Confidence            3567777775432       35699999999999999976421        112456789999999999999976432  


Q ss_pred             ----cceEEEEEcCCCCCCceEEEEEecceecccceEEEEEcCCCCCceeeEEEEee------eeceeEEEEeCCCCcee
Q 027334           89 ----HHRWQVFRGESTEPQDLIFSAKTSSVWNVRTKLDVFLANNTKEDVCDFRVKGS------WFERSCTIYAGESSAII  158 (225)
Q Consensus        89 ----~~~~~i~~~~~~~~~~~i~tikk~~~~~~k~~~~V~~~~~~~~~~~~~~v~G~------~~~~~~~I~~~~~~~~V  158 (225)
                          ..+.+|+.+.    ++++++|+++ +..++++|+|..++    ....+.|+|.      +.+++|.|++.+ |+.|
T Consensus       101 ~~~~~~~~~V~~p~----g~~iG~I~q~-~~~~~~~f~I~d~~----~~~~~~I~gp~~~~~~~~~~~F~I~~~~-~~~v  170 (221)
T PF03803_consen  101 CPCCLQEMEVESPP----GNLIGSIRQP-FSCCRPNFDIFDAN----GNPIFTIKGPCCCCSCCCDWEFEIKDPN-GQEV  170 (221)
T ss_pred             ccccceeEEEecCC----CcEEEEEEEc-CcccceEEEEEECC----CceEEEEeCCcceeccccceeeeeeccc-CcEE
Confidence                2567776665    5799999976 55578999998775    3567889887      468999999975 7999


Q ss_pred             EEEEeeee--ceeeeeeeceEEEEEeCCCc---HHHHHHHHHHhhhhhhc
Q 027334          159 AQMHKKHT--VQSILIGKDNFAVTVYPNID---YAFIVALIVILDEINHA  203 (225)
Q Consensus       159 A~V~kk~~--~~~~~~~~d~Y~l~V~pg~D---~~lvlalviiiD~~~~~  203 (225)
                      |+|+|+|+  .+++++..|+|.|+..+..|   -+++||+++.||.++-+
T Consensus       171 g~I~k~w~G~~~e~~t~~d~f~i~Fp~~l~~~~Kalll~a~~liD~~~Fe  220 (221)
T PF03803_consen  171 GSITKKWSGFCRELFTDADNFVIEFPPDLDVEQKALLLGAAFLIDYMYFE  220 (221)
T ss_pred             EEEEEecCCcchhhccccceEEEEcCCCCCHHHHHHHHHHHHHhhhhhhc
Confidence            99999997  46788999999999999877   49999999999998765

Scramblase exhibits Ca2+-activated phospholipid scrambling activity in vitro. There are also possible SH3 and WW binding motifs. Scramblase is involved in the redistribution of phospholipids after cell activation or injury [].

>COG4894 Uncharacterized conserved protein [Function unknown]

Probab=98.71  E-value=4.2e-08  Score=76.24  Aligned_cols=69  Identities=19%  Similarity=0.403  Sum_probs=63.9

Q ss_pred             CCcCeEEEEEeeeeeEeCCCEEEEcCCCCEEEEEEccCCCcccceEEEEcCCCCcEEEEEeccccccceEEE
Q 027334           23 CPYPVDLAIVRKVMTITDGNFVVTDTNGNILFKVKGVFLTFIHQRRVLLDGAGNPIVTLREKAMTAHHRWQV   94 (225)
Q Consensus        23 ~~~~~~l~vk~k~~s~~~~~f~V~D~~G~~vf~V~g~~~s~~~~~~~l~D~~G~~L~~I~~k~~s~~~~~~i   94 (225)
                      ...+..++|.-+.+++.+ .|+|+|+.|+.++.++.++.+ +..++.|.|.+|+ ++.+++|...++++|++
T Consensus        26 ~dgE~af~VeGs~f~i~d-tlti~Da~G~~l~~i~~kll~-l~~~yeI~d~~g~-~~~vrKK~tf~Rdk~e~   94 (159)
T COG4894          26 RDGEEAFKVEGSFFSIGD-TLTITDASGKTLVSIEQKLLS-LLPRYEISDGGGT-VCEVRKKVTFSRDKFEI   94 (159)
T ss_pred             CCCcEEEEEeeeEEeeCc-eEEEEecCCCChHHHHHHHhh-ccceeEEEcCCCC-EEEEEEEEEEEeeeEEE
Confidence            568999999999999988 899999999999999999999 9999999999999 88888888777999987

>KOG0621 consensus Phospholipid scramblase [Cell wall/membrane/envelope biogenesis]

Probab=98.67  E-value=5.3e-07  Score=78.67  Aligned_cols=158  Identities=16%  Similarity=0.220  Sum_probs=111.1

Q ss_pred             eCCCEEEEcCCCCEEEEEEccCC--C--c----ccceEEEEcCCCCcEEEEEecccccc--------ceEEEEEcCCCCC
Q 027334           39 TDGNFVVTDTNGNILFKVKGVFL--T--F----IHQRRVLLDGAGNPIVTLREKAMTAH--------HRWQVFRGESTEP  102 (225)
Q Consensus        39 ~~~~f~V~D~~G~~vf~V~g~~~--s--~----~~~~~~l~D~~G~~L~~I~~k~~s~~--------~~~~i~~~~~~~~  102 (225)
                      +.+.|.|.|.+|+.+|.+-...-  +  +    -+-...+.|.-|+++++++|+.....        ...++..+    +
T Consensus        97 t~NRY~v~~~~g~~v~~~~E~S~~~~Rq~~g~~RpF~~~i~D~~g~eVl~~~R~~~c~~~~c~~~~~~~~~v~~p----~  172 (292)
T KOG0621|consen   97 TANRYVVHDMYGQPLYYAMERSNVFARQYLGTHRPFAMRIMDNFGQEVLTCKRPFPCCSSACALCLAQEIEIQSP----P  172 (292)
T ss_pred             cCcEEEEEcCCcChhHHHHhhchHHHHHhhccCCcceeEeecccCcEEEEEeccccccccccccccccEEEEEcC----C
Confidence            46799999999999997754321  0  0    23567899999999999999764333        22333333    3


Q ss_pred             CceEEEEEecceecccceEEEEEcCCCCCceeeEEEEee-------eeceeEEEEeCCCCceeEEEEeeee--ceeeeee
Q 027334          103 QDLIFSAKTSSVWNVRTKLDVFLANNTKEDVCDFRVKGS-------WFERSCTIYAGESSAIIAQMHKKHT--VQSILIG  173 (225)
Q Consensus       103 ~~~i~tikk~~~~~~k~~~~V~~~~~~~~~~~~~~v~G~-------~~~~~~~I~~~~~~~~VA~V~kk~~--~~~~~~~  173 (225)
                      ...+++|.+. .....++|+|.-..    ....+.|+|-       +-+..|.+...+++..|++|.|+|.  ..+.++.
T Consensus       173 ~~~lG~v~q~-~~~~~~~f~i~~~~----~~~v~~v~gp~~~~~~~~~d~~f~~~~~d~~~~vg~I~k~w~g~~rE~fTD  247 (292)
T KOG0621|consen  173 MGLLGKVLQT-WGCVNPNFHLWDRD----GNLVFLVEGPRCCTFACCDDTVFFPKTTDNGRIVGSISRKWAGLVREAFTD  247 (292)
T ss_pred             CceEEEEEEe-eccccceEEEEccc----ceeEEEEEcCceeEEEeecCcceeEEEcCCCeEEEEEeecccchhhhheec
Confidence            4577777754 22345677764321    2344555554       3345555555445899999999997  5789999


Q ss_pred             eceEEEEEeCCCcH---HHHHHHHHHhhhhhhcCC
Q 027334          174 KDNFAVTVYPNIDY---AFIVALIVILDEINHASS  205 (225)
Q Consensus       174 ~d~Y~l~V~pg~D~---~lvlalviiiD~~~~~~~  205 (225)
                      .|+|.|...-..|.   ++++|.+.-||.+.-+++
T Consensus       248 ad~f~v~FPldLdvk~kavllga~flID~~~Fe~~  282 (292)
T KOG0621|consen  248 ADTFVVHFPLDLDVKLKALLLGSTFLIDYMSFESR  282 (292)
T ss_pred             cceeeEecCCcCCHHHHhhhhhheeeEEEEEEecC
Confidence            99999999877773   999999999998888776

>PF04525 Tub_2: Tubby C 2; InterPro: IPR007612 This is a family of plant and bacterial uncharacterised proteins

Probab=98.12  E-value=3.1e-05  Score=63.54  Aligned_cols=88  Identities=15%  Similarity=0.283  Sum_probs=51.8

Q ss_pred             CCCEEEEEEccCCCcccceEEEEcCCCCcEEEEEe-ccccccceEEEEEcCCCCCCceEEEEEecceecccceEEEEEcC
Q 027334           49 NGNILFKVKGVFLTFIHQRRVLLDGAGNPIVTLRE-KAMTAHHRWQVFRGESTEPQDLIFSAKTSSVWNVRTKLDVFLAN  127 (225)
Q Consensus        49 ~G~~vf~V~g~~~s~~~~~~~l~D~~G~~L~~I~~-k~~s~~~~~~i~~~~~~~~~~~i~tikk~~~~~~k~~~~V~~~~  127 (225)
                      .....++|..+..++.++.+.|+|.+|++++++.. +.++++.+..+++..    ++++++|+++ .++++++|.++..+
T Consensus        11 ~~~~~l~v~~k~~~~~~~~f~V~D~~G~~vf~V~g~~~~s~~~~~~l~D~~----G~~L~~i~~k-~~~l~~~w~i~~~~   85 (187)
T PF04525_consen   11 PQPVTLTVKKKSLSFSGDDFTVYDENGNVVFRVDGGKFFSIGKKRTLMDAS----GNPLFTIRRK-LFSLRPTWEIYRGG   85 (187)
T ss_dssp             SS-EEEEEE----------EEEEETTS-EEEEEE--SCTTBTTEEEEE-TT----S-EEEEEE---------EEEEEETT
T ss_pred             CCceEEEEEEEEeeecCCCEEEEcCCCCEEEEEEEecccCCCCEEEEECCC----CCEEEEEEee-ecccceEEEEEECC
Confidence            45677888655443268999999999999999999 889999999999976    4799999985 56789999999987


Q ss_pred             CCCCceeeEEEEee
Q 027334          128 NTKEDVCDFRVKGS  141 (225)
Q Consensus       128 ~~~~~~~~~~v~G~  141 (225)
                      ..+++.+.++++-.
T Consensus        86 ~~~~~~~i~tvkk~   99 (187)
T PF04525_consen   86 GSEGKKPIFTVKKK   99 (187)
T ss_dssp             ---GGGEEEEEE--
T ss_pred             CCccCceEEEEEEe
Confidence            54334467788755

; PDB: 1ZXU_A 2Q4M_A.

>PF03803 Scramblase: Scramblase ; InterPro: IPR005552 Scramblase is palmitoylated and contains a potential protein kinase C phosphorylation site

Probab=97.01  E-value=0.011  Score=49.40  Aligned_cols=66  Identities=18%  Similarity=0.293  Sum_probs=48.1

Q ss_pred             EEEEcCCCCEEEEEEccCCC-----cccceEEEEcCCCCcEEEEEeccccccceEEEEEcCCCCCCceEEEEEec
Q 027334           43 FVVTDTNGNILFKVKGVFLT-----FIHQRRVLLDGAGNPIVTLREKAMTAHHRWQVFRGESTEPQDLIFSAKTS  112 (225)
Q Consensus        43 f~V~D~~G~~vf~V~g~~~s-----~~~~~~~l~D~~G~~L~~I~~k~~s~~~~~~i~~~~~~~~~~~i~tikk~  112 (225)
                      ..|+|.+|+.+++++-...-     ....+..+.++.|++|.+|+++...+.++|+|++.++    +++++|+-+
T Consensus        78 ~~i~D~~g~~vl~i~Rp~~c~~C~~~~~~~~~V~~p~g~~iG~I~q~~~~~~~~f~I~d~~~----~~~~~I~gp  148 (221)
T PF03803_consen   78 MHIYDNYGREVLTIERPFKCCSCCPCCLQEMEVESPPGNLIGSIRQPFSCCRPNFDIFDANG----NPIFTIKGP  148 (221)
T ss_pred             EEEEecCCCEEEEEEcCCcceecccccceeEEEecCCCcEEEEEEEcCcccceEEEEEECCC----ceEEEEeCC
Confidence            46788888888888764311     0135677788888888888887766788888888763    678888754

Scramblase exhibits Ca2+-activated phospholipid scrambling activity in vitro. There are also possible SH3 and WW binding motifs. Scramblase is involved in the redistribution of phospholipids after cell activation or injury [].

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	225
1zxu_A	217	X-Ray Structure Of Protein From Arabidopsis Thalian		3e-73

>pdb|1ZXU|A Chain A, X-Ray Structure Of Protein From Arabidopsis Thaliana At5g01750 Length = 217

Iteration: 1
 Score =  271 bits (692), Expect = 3e-73,   Method: Compositional matrix adjust.
 Identities = 122/198 (61%), Positives = 155/198 (78%), Gaps = 4/198 (2%)
Query: 5   PSLIGGGAAVAVISPQYCCPYPVDLAIVRKVMTITDGNFVVTDTNGNILFKVKGVFLTFI 64
           P+   GG    V+ P+YC PYP+D AIVRK  ++TDGNFV+TD NGN+LFKVK      +
Sbjct: 19  PTPQAGGV---VVDPKYCAPYPIDXAIVRKXXSLTDGNFVITDVNGNLLFKVKEPVFG-L 74
Query: 65  HQRRVLLDGAGNPIVTLREKAMTAHHRWQVFRGESTEPQDLIFSAKTSSVWNVRTKLDVF 124
           H +RVLLDG+G P+VTLREK ++ H RWQVFRG ST+ +DL+++ K SS   ++TKLDVF
Sbjct: 75  HDKRVLLDGSGTPVVTLREKXVSXHDRWQVFRGGSTDQRDLLYTVKRSSXLQLKTKLDVF 134
Query: 125 LANNTKEDVCDFRVKGSWFERSCTIYAGESSAIIAQMHKKHTVQSILIGKDNFAVTVYPN 184
           L +N  E  CDFRVKGSW ERSC +YAGES AI+AQ H+KHTVQS+ +GKDNF+VTVYPN
Sbjct: 135 LGHNKDEKRCDFRVKGSWLERSCVVYAGESDAIVAQXHRKHTVQSVFLGKDNFSVTVYPN 194
Query: 185 IDYAFIVALIVILDEINH 202
           +DYAFI +L+VILD++N 
Sbjct: 195 VDYAFIASLVVILDDVNR 212

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	225
1zxu_A	217	AT5G01750 protein; PFAM PF01167, TULP, structural	1e-70

>1zxu_A AT5G01750 protein; PFAM PF01167, TULP, structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG; 1.70A {Arabidopsis thaliana} SCOP: d.23.1.2 PDB: 2q4m_A Length = 217

 Score =  213 bits (544), Expect = 1e-70
 Identities = 124/207 (59%), Positives = 160/207 (77%), Gaps = 2/207 (0%)

Query: 2   AQQPSLIGGG-AAVAVISPQYCCPYPVDLAIVRKVMTITDGNFVVTDTNGNILFKVKGVF 60
              PS      A   V+ P+YC PYP+D+AIVRK+M++TDGNFV+TD NGN+LFKVK   
Sbjct: 12  GSGPSGAPTPQAGGVVVDPKYCAPYPIDMAIVRKMMSLTDGNFVITDVNGNLLFKVKEPV 71

Query: 61  LTFIHQRRVLLDGAGNPIVTLREKAMTAHHRWQVFRGESTEPQDLIFSAKTSSVWNVRTK 120
               H +RVLLDG+G P+VTLREK ++ H RWQVFRG ST+ +DL+++ K SS+  ++TK
Sbjct: 72  FGL-HDKRVLLDGSGTPVVTLREKMVSMHDRWQVFRGGSTDQRDLLYTVKRSSMLQLKTK 130

Query: 121 LDVFLANNTKEDVCDFRVKGSWFERSCTIYAGESSAIIAQMHKKHTVQSILIGKDNFAVT 180
           LDVFL +N  E  CDFRVKGSW ERSC +YAGES AI+AQMH+KHTVQS+ +GKDNF+VT
Sbjct: 131 LDVFLGHNKDEKRCDFRVKGSWLERSCVVYAGESDAIVAQMHRKHTVQSVFLGKDNFSVT 190

Query: 181 VYPNIDYAFIVALIVILDEINHASSSS 207
           VYPN+DYAFI +L+VILD++N    ++
Sbjct: 191 VYPNVDYAFIASLVVILDDVNREDRAA 217

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	225
1zxu_A	217	AT5G01750 protein; PFAM PF01167, TULP, structural	100.0
1zxu_A	217	AT5G01750 protein; PFAM PF01167, TULP, structural	98.25

>1zxu_A AT5G01750 protein; PFAM PF01167, TULP, structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG; 1.70A {Arabidopsis thaliana} SCOP: d.23.1.2 PDB: 2q4m_A

Probab=100.00  E-value=2.5e-46  Score=313.13  Aligned_cols=203  Identities=60%  Similarity=1.074  Sum_probs=151.9

Q ss_pred             CCCCCCCCCCeeEEeCCCccCCcCeEEEEEeeeeeEeCCCEEEEcCCCCEEEEEEccCCCcccceEEEEcCCCCcEEEEE
Q 027334            3 QQPSLIGGGAAVAVISPQYCCPYPVDLAIVRKVMTITDGNFVVTDTNGNILFKVKGVFLTFIHQRRVLLDGAGNPIVTLR   82 (225)
Q Consensus         3 ~~~~~~~p~~p~~vv~~~~~~~~~~~l~vk~k~~s~~~~~f~V~D~~G~~vf~V~g~~~s~~~~~~~l~D~~G~~L~~I~   82 (225)
                      ..|.|.||++|++||+++||++++++|+||||.+++++++|+|+|++|+.+|+|+++.++ ++.++.|+|++|++|++|+
T Consensus        14 ~~~~~~~~~~~~~vv~~~~~~~~~~~l~vkqk~~~~~~~~f~V~D~~G~~vf~V~~~~~~-~~~~~~l~D~~G~~l~~i~   92 (217)
T 1zxu_A           14 GPSGAPTPQAGGVVVDPKYCAPYPIDMAIVRKMMSLTDGNFVITDVNGNLLFKVKEPVFG-LHDKRVLLDGSGTPVVTLR   92 (217)
T ss_dssp             ----------CCCSSCGGGBCSSCEEEEEECC-----CCCEEEEETTSCEEEEEECSSTT-CCSEEEEECTTSCEEEEEE
T ss_pred             CCCCCCCCCCcEEEECccccCCCCcEEEEEEEEeEeeCCCEEEEeCCCCEEEEEEccccC-CCCEEEEECCCCCEEEEEE
Confidence            345678889999999999999999999999999999988999999999999999999889 9999999999999999999


Q ss_pred             eccccccceEEEEEcCCCCCCceEEEEEecceecccceEEEEEcCCCCCceeeEEEEeeeeceeEEEEeCCCCceeEEEE
Q 027334           83 EKAMTAHHRWQVFRGESTEPQDLIFSAKTSSVWNVRTKLDVFLANNTKEDVCDFRVKGSWFERSCTIYAGESSAIIAQMH  162 (225)
Q Consensus        83 ~k~~s~~~~~~i~~~~~~~~~~~i~tikk~~~~~~k~~~~V~~~~~~~~~~~~~~v~G~~~~~~~~I~~~~~~~~VA~V~  162 (225)
                      +|.++++++|++|++++.+.++++|+||+++.+.++++++|++.++.+++.+.|+|+|+|++++|+|+++++|++||+|+
T Consensus        93 rk~~~~~~~~~v~~~~~~~~~~~i~~vrk~~~~~~~~~~~V~~~~~~~~~~~~~~I~G~~~~~~f~I~~~~~~~~Va~I~  172 (217)
T 1zxu_A           93 EKMVSMHDRWQVFRGGSTDQRDLLYTVKRSSMLQLKTKLDVFLGHNKDEKRCDFRVKGSWLERSCVVYAGESDAIVAQMH  172 (217)
T ss_dssp             C------CEEEEEETTCCCGGGEEEEEEC-------CCEEEEETTCCC-CCCSEEEESCTTTTCCEEEETTTCCEEEEEE
T ss_pred             ccccccCcEEEEEcCCCCCCCcEEEEEEEeccccCCCeEEEEECCCCCCCceEEEEEEeEeCCEEEEEECCCCEEEEEEE
Confidence            99999999999999886444468999998754457899999998755445689999999999999999986568999999


Q ss_pred             eeeeceeeeeeeceEEEEEeCCCcHHHHHHHHHHhhhhhhcCCC
Q 027334          163 KKHTVQSILIGKDNFAVTVYPNIDYAFIVALIVILDEINHASSS  206 (225)
Q Consensus       163 kk~~~~~~~~~~d~Y~l~V~pg~D~~lvlalviiiD~~~~~~~~  206 (225)
                      |+|++++++.++|+|.|+|.|++|.+|++|+|++||++.+++++
T Consensus       173 kk~~~~~~~~~~D~y~l~V~p~~D~aliialvv~iD~~~~~~~~  216 (217)
T 1zxu_A          173 RKHTVQSVFLGKDNFSVTVYPNVDYAFIASLVVILDDVNREDRA  216 (217)
T ss_dssp             EC--------CBCSEEEEECTTSBHHHHHHHHHHHHHHHC----
T ss_pred             eeeeccccccCCcEEEEEECCCCCHHHHHHHHHHHHHhhhhccC
Confidence            99998889999999999999999999999999999999998764

>1zxu_A AT5G01750 protein; PFAM PF01167, TULP, structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG; 1.70A {Arabidopsis thaliana} SCOP: d.23.1.2 PDB: 2q4m_A

Probab=98.25  E-value=1.7e-05  Score=65.29  Aligned_cols=99  Identities=15%  Similarity=0.279  Sum_probs=68.0

Q ss_pred             CCCCEEEEEEccCCCcccc-eEEEEcCCCCcEEEEEeccccccceEEEEEcCCCCCCceEEEEEecceecccceEEEEEc
Q 027334           48 TNGNILFKVKGVFLTFIHQ-RRVLLDGAGNPIVTLREKAMTAHHRWQVFRGESTEPQDLIFSAKTSSVWNVRTKLDVFLA  126 (225)
Q Consensus        48 ~~G~~vf~V~g~~~s~~~~-~~~l~D~~G~~L~~I~~k~~s~~~~~~i~~~~~~~~~~~i~tikk~~~~~~k~~~~V~~~  126 (225)
                      ..+...++|+.+.++ +.. .++|+|.+|+.++.++.+.++++.++.|++..    ++++++|+++ .+.+.++|+++..
T Consensus        34 ~~~~~~l~vkqk~~~-~~~~~f~V~D~~G~~vf~V~~~~~~~~~~~~l~D~~----G~~l~~i~rk-~~~~~~~~~v~~~  107 (217)
T 1zxu_A           34 APYPIDMAIVRKMMS-LTDGNFVITDVNGNLLFKVKEPVFGLHDKRVLLDGS----GTPVVTLREK-MVSMHDRWQVFRG  107 (217)
T ss_dssp             CSSCEEEEEECC------CCCEEEEETTSCEEEEEECSSTTCCSEEEEECTT----SCEEEEEEC-------CEEEEEET
T ss_pred             CCCCcEEEEEEEEeE-eeCCCEEEEeCCCCEEEEEEccccCCCCEEEEECCC----CCEEEEEEcc-ccccCcEEEEEcC
Confidence            358899999999888 766 99999999999999999988888999998876    4799999986 4567899999876


Q ss_pred             CCCCCceeeEEEEee--e-eceeEEEEeC
Q 027334          127 NNTKEDVCDFRVKGS--W-FERSCTIYAG  152 (225)
Q Consensus       127 ~~~~~~~~~~~v~G~--~-~~~~~~I~~~  152 (225)
                      +....+.+.+.|+-.  + +...|.|...
T Consensus       108 ~~~~~~~~i~~vrk~~~~~~~~~~~V~~~  136 (217)
T 1zxu_A          108 GSTDQRDLLYTVKRSSMLQLKTKLDVFLG  136 (217)
T ss_dssp             TCCCGGGEEEEEEC-------CCEEEEET
T ss_pred             CCCCCCcEEEEEEEeccccCCCeEEEEEC
Confidence            532112346677643  2 4567888865

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	225
d2q4ma1	189	d.23.1.2 (A:24-212) Hypothetical protein At5g01750	4e-70

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	225
d2q4ma1	189	Hypothetical protein At5g01750 {Thale cress (Arabi	100.0
d2q4ma1	189	Hypothetical protein At5g01750 {Thale cress (Arabi	98.24