Citrus Sinensis ID: 027403

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220----
Protein Sequence
MSQHLHIDESEVPRMCLELYREHGTTMAGLKAVGYEFDNDEFHAFVHGKLPYEKLKPDPVLRNLLLSMPQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVPVPPADHALNSIHNIKEAIPEIWEGEGEQLEQVIQPAAVETAVLA
Secondary Structure (PSIPRED)
ccccccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHcccccccccccHHHHHHHHcccccccccccccHHHHHHHHHHcccccccccccHHccccccccccccccccccccccccccccccccHHHHHHHHHHHccccccEEEEEccHHcHHHHHHcccEEEEEccccccccccEEEccHHHHHHHHHHHHccccccHHHHHcccccHHcccc
Secondary Structure Prediction (SSPRO)
cHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHcccccHcccccHHHHHHHHHccccEEEEEcccHHHHHHHHHHcccHHHHHcEEEEEEccccccccccccccccccccccccccccccHHHHHHHHHHccccHccEEEEcccHHHHHHHHHcccEEEEEccccccccccHHHHHHHcHHHHHHHHHHHcccccHccccccEEEEEEEc
Coil and Loop (DISEMBL)
msqhlhidesevPRMCLELYREHGTTMAGLKAvgyefdndefhafvhgklpyeklkpdpVLRNLllsmpqrkiiftNADQKHAMEVLGRlgledcfegiicfetinprlqpadntdgiennsfssnqrilckpSLEAIETAIRIanvdpkktiffddSARNIASAKAAGLHTVIvgssvpvppadhalnSIHNIKEAIPEIWEGEGEQLEQVIQPAAVETAVLA
Flexible Loop (DISEMBL)
msqhlhidesevpRMCLELYREHGTTMAGLKAVGYEFDNDEFHAFVHGKLPYEKLKPDPVLRNLLLSMPQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCKPSLEAIETAIrianvdpkktIFFDDSARNIASAKAAGLHTVIVGSSVPVPPADHALNSIHNIKEAIPEIWEGEGEQLEQVIQPAAVETAVLA
Low Complexity Region (SEG)
MSQHLHIDESEVPRMCLELYREHGTTMAGLKAVGYEFDNDEFHAFVHGKLPYEKLKPDPVLRNLLLSMPQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVPVPPADHALNSIHNIKEAIPEIWEGEGEQLEQVIQPAAVETAVLA
Disordered region (IsUnstruct)
************PRMCLELYREHGTTMAGLKAVGYEFDNDEFHAFVHGKLPYEKLKPDPVLRNLLLSMPQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRL*****************QRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVPVPPADHALNSIHNIKEAIPEIWEGEG******************
Disordered Region (DISOPRED)
**QHLHIDESEVPRMCLELYREHGTTMAGLKAVGYEFDNDEFHAFVHGKLPYEKLKPDPVLRNLLLSMPQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVPVPPADHALNSIHNIKEAIPEIWEGEG*********AAVETAVL*
Disordered Region (DISEMBL)
MSQHLHIDESEVPRMCLELYREHGTTMAGLKAVGYEFDNDEFHAFVHGKLPYEKLKPDPVLRNLLLSMPQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVPVPPADHALNSIHNIKEAIPEIWEGEGEQLEQVIQPAAVETAVLA
Disordered Region (DISPRO)
*S*HLHIDESEVPRMCLELYREHGTTMAGLKAVGYEFDNDEFHAFVHGKLPYEKLKPDPVLRNLLLSMPQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQP*********NSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVPVPPADHALNSIHNIKEAIPEIWEGEGEQLEQVIQPAAVETAVLA
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MSQHLHIDESEVPRMCLELYREHGTTMAGLKAVGYEFDNDEFHAFVHGKLPYEKLKPDPVLRNLLLSMPQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVPVPPADHALNSIHNIKEAIPEIWEGEGEQLEQVIQPAAVETAVLA
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	224	2.2.26 [Sep-21-2011]
Q09893	226	Uncharacterized protein C	yes	no	0.816	0.809	0.336	3e-15
P53078	280	Suppressor of disruption	yes	no	0.674	0.539	0.280	2e-11
P40025	321	Phosphate metabolism prot	no	no	0.683	0.476	0.284	2e-06

>sp|Q09893|YAI5_SCHPO Uncharacterized protein C24B11.05 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC24B11.05 PE=3 SV=1

 Score = 82.4 bits (202), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 72/214 (33%), Positives = 97/214 (45%), Gaps = 31/214 (14%)

Query: 1   MSQHLHIDESEVPRMCLELYREHGTTMAGLKAVGYEFDNDEFHAFVHGKLPYEK-LKPDP 59
            S  L I   E  R+    YR +G  + GL  + +E D  ++   V   LP EK +K D 
Sbjct: 35  FSDKLGIPTEEAERLREVYYRHYGIAIRGL-VLHHEIDAVDYDQRVDQSLPLEKVIKKDE 93

Query: 60  VLRNLLLSMPQRK--IIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDG 117
           VLR +LL + ++    IFTNA   HA  VL  LG+EDCF                   DG
Sbjct: 94  VLREMLLELRKKYKCWIFTNAYIVHANRVLKYLGIEDCF-------------------DG 134

Query: 118 IENNSFSSNQRILCKPSLEAIETAIRIANV-DPKKTIFFDDSARNIASAKAAGLHTVIV- 175
           I    +++   ++ KP  E  E  +R A V D  K IF DDS  NI  A+  G    +  
Sbjct: 135 ITYCDYNAKD-LIAKPMPEMYERVMREAGVTDKDKCIFVDDSYGNILGAREFGWKYTVQL 193

Query: 176 ---GSSVPVPPA-DHALNSIHNIKEAIPEIWEGE 205
              G  +P P A  H +  IH  K  + EI +GE
Sbjct: 194 VEHGDPLPQPQAGSHVIRDIHKFKHLLDEI-DGE 226

Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812)

>sp|P53078|SDT1_YEAST Suppressor of disruption of TFIIS OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=SDT1 PE=1 SV=1

 Score = 69.3 bits (168), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 50/178 (28%), Positives = 85/178 (47%), Gaps = 27/178 (15%)

Query: 4   HLHIDESEVPRMCLELYREHGTTMAGLKAVGYEFDNDEFHAFVHGKLPYEK-LKPDPVLR 62
           HL +   +   +    Y+E+G  + GL  + ++ +  E++  V   LP +  LKPD  LR
Sbjct: 88  HLKLSPEDAHVLNNSYYKEYGLAIRGL-VMFHKVNALEYNRLVDDSLPLQDILKPDIPLR 146

Query: 63  NLLLSMPQ-----RKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDG 117
           N+LL + Q     +  +FTNA + HA+  L  LG+ D F                   DG
Sbjct: 147 NMLLRLRQSGKIDKLWLFTNAYKNHAIRCLRLLGIADLF-------------------DG 187

Query: 118 IENNSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFF-DDSARNIASAKAAGLHTVI 174
           +    +S    ++CKP ++A E A++ + +   +  +F DDS +NI +    G+ T I
Sbjct: 188 LTYCDYSRTDTLVCKPHVKAFEKAMKESGLARYENAYFIDDSGKNIETGIKLGMKTCI 245

Could be an enzyme that inactivates 6-azauracil by modifying it.

Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292)

>sp|P40025|PHM8_YEAST Phosphate metabolism protein 8 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=PHM8 PE=1 SV=1

 Score = 53.1 bits (126), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 51/179 (28%), Positives = 83/179 (46%), Gaps = 26/179 (14%)

Query: 5   LHIDESEVPRMCLELYREHGTTMAGLKAVGYEFDNDEFHAFVHGKLPYEK-LKPDPVLRN 63
           L  D+ E  R+    Y+E+G ++ GL       D  +++ F+   LP +  LKPD  LR 
Sbjct: 86  LGFDDDEAERLIESYYQEYGLSVKGLIKNKQIDDVLQYNTFIDDSLPLQDYLKPDWKLRE 145

Query: 64  LLLSMPQRK-------IIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTD 116
           LL+++ ++K        +FTN+ + HA+  +  LG+ D F+GI       P         
Sbjct: 146 LLINLKKKKLGKFDKLWLFTNSYKNHAIRCVKILGIADLFDGITYCHYDRP--------- 196

Query: 117 GIENNSFSSNQRILCKPSLEAIETAIRIANVDP-KKTIFFDDSARNIASAKAAGLHTVI 174
            IE       +  +CKP  +  ETA   + +       F DD+  N+ SA + G+  VI
Sbjct: 197 -IE-------EEFICKPDPKFFETAKLQSGLSSFANAWFIDDNESNVRSALSMGMGHVI 247

May be involved in phosphate metabolism.

Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	224
224130792	261	predicted protein [Populus trichocarpa]	0.982	0.842	0.785	8e-98
224068304	302	predicted protein [Populus trichocarpa]	0.982	0.728	0.709	3e-96
255548203	283	catalytic, putative [Ricinus communis] g	1.0	0.791	0.735	5e-96
388523075	225	unknown [Lotus japonicus]	1.0	0.995	0.746	7e-94
359807448	274	uncharacterized protein LOC100814291 [Gl	1.0	0.817	0.733	5e-92
225437740	287	PREDICTED: suppressor of disruption of T	1.0	0.780	0.735	6e-91
356505699	279	PREDICTED: uncharacterized protein C24B1	0.995	0.799	0.690	3e-89
356572862	279	PREDICTED: uncharacterized protein C24B1	0.995	0.799	0.682	1e-88
388509590	257	unknown [Medicago truncatula]	0.933	0.813	0.718	1e-88
297744067	302	unnamed protein product [Vitis vinifera]	0.937	0.695	0.751	8e-86

>gi|224130792|ref|XP_002320927.1| predicted protein [Populus trichocarpa] gi|222861700|gb|EEE99242.1| predicted protein [Populus trichocarpa]

 Score =  362 bits (928), Expect = 8e-98,   Method: Compositional matrix adjust.
 Identities = 176/224 (78%), Positives = 194/224 (86%), Gaps = 4/224 (1%)

Query: 1   MSQHLHIDESEVPRMCLELYREHGTTMAGLKAVGYEFDNDEFHAFVHGKLPYEKLKPDPV 60
           M   LHI+ESEVPRMCLELYREHGTTMAGLK +GYEFD+DEFHAFVHG+LPYE LKPDPV
Sbjct: 42  MLHKLHIEESEVPRMCLELYREHGTTMAGLKDLGYEFDDDEFHAFVHGRLPYETLKPDPV 101

Query: 61  LRNLLLSMPQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIEN 120
           LRNLLLS+PQRKIIFTNAD+ HA EVL R+GLEDCFEG+IC+ET+NP L+ A+N D ++N
Sbjct: 102 LRNLLLSLPQRKIIFTNADKAHAAEVLKRMGLEDCFEGVICYETLNPPLENANNMDALDN 161

Query: 121 NSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP 180
           ++     RILCKPSLEAIE AI+IANVDPKKTIFFDDSARNIAS KAAGL TVIVGSSV 
Sbjct: 162 DA----SRILCKPSLEAIEAAIQIANVDPKKTIFFDDSARNIASGKAAGLRTVIVGSSVL 217

Query: 181 VPPADHALNSIHNIKEAIPEIWEGEGEQLEQVIQPAAVETAVLA 224
           VP ADH L +IHNIKEAIPEIWE EGEQ EQVIQ  AVET V A
Sbjct: 218 VPGADHGLRNIHNIKEAIPEIWEDEGEQSEQVIQSTAVETVVHA 261

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224068304|ref|XP_002302699.1| predicted protein [Populus trichocarpa] gi|222844425|gb|EEE81972.1| predicted protein [Populus trichocarpa]

 Score =  357 bits (915), Expect = 3e-96,   Method: Compositional matrix adjust.
 Identities = 178/251 (70%), Positives = 195/251 (77%), Gaps = 31/251 (12%)

Query: 1   MSQHLHIDESEVPRMCLELYREHGTTMAGLKAVGYEFDNDEFHAFVHGKLPYEKLKPDPV 60
           M   LHI+ESEVPRMCLELYREHGTTMAGLKA+GYEFDNDEFHAFVHG+LP E LKPDPV
Sbjct: 51  MLHQLHIEESEVPRMCLELYREHGTTMAGLKALGYEFDNDEFHAFVHGRLPCETLKPDPV 110

Query: 61  LRNLLLSMPQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIEN 120
           LRN+LLS+PQRKIIFTNAD+ HA EVL R+GLEDCFEG+ICFET+NP L+ A+N D ++N
Sbjct: 111 LRNILLSVPQRKIIFTNADKAHAAEVLKRMGLEDCFEGVICFETLNPPLENANNMDALDN 170

Query: 121 -------------------------------NSFSSNQRILCKPSLEAIETAIRIANVDP 149
                                          N FSS  RILCKPSLEAIE AI+IANVDP
Sbjct: 171 DAVIAGGEPEPSDFDGTAATGSKKILKNALDNGFSSKSRILCKPSLEAIEAAIQIANVDP 230

Query: 150 KKTIFFDDSARNIASAKAAGLHTVIVGSSVPVPPADHALNSIHNIKEAIPEIWEGEGEQL 209
           KKTIFFDDSARNIAS KAAGLHTVIVGSSV VP AD+AL SIHNIKEAIPEIWE EGE++
Sbjct: 231 KKTIFFDDSARNIASGKAAGLHTVIVGSSVLVPGADNALRSIHNIKEAIPEIWEDEGEEM 290

Query: 210 EQVIQPAAVET 220
           E VIQ   VET
Sbjct: 291 ELVIQSTTVET 301

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255548203|ref|XP_002515158.1| catalytic, putative [Ricinus communis] gi|223545638|gb|EEF47142.1| catalytic, putative [Ricinus communis]

 Score =  356 bits (913), Expect = 5e-96,   Method: Compositional matrix adjust.
 Identities = 178/242 (73%), Positives = 197/242 (81%), Gaps = 18/242 (7%)

Query: 1   MSQHLHIDESEVPRMCLELYREHGTTMAGLKAVGYEFDNDEFHAFVHGKLPYEKLKPDPV 60
           M  HL+I+ESEVPRMCLELYRE+GTTMAGLKA+GYEFD+DEFHAF HG+LPYEKLKPDPV
Sbjct: 42  MLHHLNIEESEVPRMCLELYREYGTTMAGLKAIGYEFDDDEFHAFAHGRLPYEKLKPDPV 101

Query: 61  LRNLLLSMPQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIEN 120
           LRNLLLSMPQRKIIFTNAD+ HA EVL RLGLEDCFEGIICFET+NP L  A+  D +++
Sbjct: 102 LRNLLLSMPQRKIIFTNADKAHAAEVLQRLGLEDCFEGIICFETLNPPLGTANYMDALDD 161

Query: 121 NSF----------------SSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIAS 164
           +                  +S  RILCKPSLEA+E AIRIA+VDPK+TIFFDDS RNIAS
Sbjct: 162 DEVLASGEPQHSDLDDADTNSKPRILCKPSLEAMEAAIRIADVDPKRTIFFDDSVRNIAS 221

Query: 165 AKAAGLHTVIVGSSVPVPPADHALNSIHNIKEAIPEIWEGEGEQLEQVI--QPAAVETAV 222
            KAAGLHTVIVGSSV VP ADH L+SIHNIKEAIPEIWEGEGE LEQVI    +AVE  V
Sbjct: 222 GKAAGLHTVIVGSSVLVPGADHVLSSIHNIKEAIPEIWEGEGEHLEQVIPSSASAVEALV 281

Query: 223 LA 224
           LA
Sbjct: 282 LA 283

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388523075|gb|AFK49599.1| unknown [Lotus japonicus]

 Score =  348 bits (894), Expect = 7e-94,   Method: Compositional matrix adjust.
 Identities = 168/225 (74%), Positives = 193/225 (85%), Gaps = 1/225 (0%)

Query: 1   MSQHLHIDESEVPRMCLELYREHGTTMAGLKAVGYEFDNDEFHAFVHGKLPYEKLKPDPV 60
           M +HLHI+ESEVP+MCL+LY EHGTTMAGLKA+GYEFDNDEFHA+VHG+LPYEKLKPD V
Sbjct: 1   MLEHLHIEESEVPKMCLDLYIEHGTTMAGLKALGYEFDNDEFHAYVHGRLPYEKLKPDSV 60

Query: 61  LRNLLLSMPQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETIN-PRLQPADNTDGIE 119
           LRNLLLSMPQRKIIFTN+D KHA+EVL RLGLEDCFEGIICFET+N P +  +D+    E
Sbjct: 61  LRNLLLSMPQRKIIFTNSDHKHAVEVLNRLGLEDCFEGIICFETLNPPNIDVSDDNHVTE 120

Query: 120 NNSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSV 179
           +  F+S+ +ILCKPS+EA E AIRIANVDPKKTIFFDDS RNIASAK AGLHTV+VG S 
Sbjct: 121 SGRFNSHTQILCKPSVEAFEAAIRIANVDPKKTIFFDDSTRNIASAKVAGLHTVMVGRSD 180

Query: 180 PVPPADHALNSIHNIKEAIPEIWEGEGEQLEQVIQPAAVETAVLA 224
            VP A+HALNSIHNI+EA+PEIWE E +  +Q+IQ  AVE  VLA
Sbjct: 181 LVPGANHALNSIHNIREALPEIWEVEEDSQQQMIQSLAVEAIVLA 225

Source: Lotus japonicus

Species: Lotus japonicus

Genus: Lotus

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359807448|ref|NP_001241392.1| uncharacterized protein LOC100814291 [Glycine max] gi|255645771|gb|ACU23378.1| unknown [Glycine max]

 Score =  342 bits (878), Expect = 5e-92,   Method: Compositional matrix adjust.
 Identities = 171/233 (73%), Positives = 191/233 (81%), Gaps = 9/233 (3%)

Query: 1   MSQHLHIDESEVPRMCLELYREHGTTMAGLKAVGYEFDNDEFHAFVHGKLPYEKLKPDPV 60
           M + LHI+ESEVP+MCL+LYRE+GTTMAGLK +GYEFDNDEFHA+VHG+LPYEKLKPDPV
Sbjct: 42  MLELLHIEESEVPKMCLDLYREYGTTMAGLKVLGYEFDNDEFHAYVHGRLPYEKLKPDPV 101

Query: 61  LRNLLLSMPQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQ------PADN 114
           LRNLLLSMPQRKIIFTNAD  HA++VL RLGLEDCFEGIICFET+NP  Q      P DN
Sbjct: 102 LRNLLLSMPQRKIIFTNADHAHAVKVLNRLGLEDCFEGIICFETLNPPKQINCMDVPNDN 161

Query: 115 ---TDGIENNSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLH 171
              TD  EN  F+S+ +ILCKPS+EA E AIRIANVDPKKTIFFDDS RN+ SAK  GL+
Sbjct: 162 HVLTDLTENGCFNSHPQILCKPSVEAFEAAIRIANVDPKKTIFFDDSVRNVESAKITGLN 221

Query: 172 TVIVGSSVPVPPADHALNSIHNIKEAIPEIWEGEGEQLEQVIQPAAVETAVLA 224
           TV+VG S  VP ADHALNSIHNIKEA+PEIWE E    +Q IQP  VET VLA
Sbjct: 222 TVLVGHSDLVPGADHALNSIHNIKEALPEIWEIEDGNQQQKIQPPTVETMVLA 274

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225437740|ref|XP_002280756.1| PREDICTED: suppressor of disruption of TFIIS-like [Vitis vinifera]

 Score =  338 bits (868), Expect = 6e-91,   Method: Compositional matrix adjust.
 Identities = 181/246 (73%), Positives = 197/246 (80%), Gaps = 22/246 (8%)

Query: 1   MSQHLHIDESEVPRMCLELYREHGTTMAGLKAVGYEFDNDEFHAFVHGKLPYEKLKPDPV 60
           M QHL+I+ESEVPRMCLELYRE+GTTMAGLKA+GYEFD+DEFHA+VHG+LPYE LKPDPV
Sbjct: 42  MLQHLNIEESEVPRMCLELYREYGTTMAGLKALGYEFDDDEFHAYVHGRLPYESLKPDPV 101

Query: 61  LRNLLLSMPQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINP------------- 107
           LRNLLLSMPQRKIIFTNAD++HA +VL RLGLE CFEG+ICFET+NP             
Sbjct: 102 LRNLLLSMPQRKIIFTNADREHAAQVLNRLGLEGCFEGVICFETLNPPPEPTEYNEELEG 161

Query: 108 -------RLQPADN-TDGIENNSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSA 159
                    +P DN  D  E+NSF     ILCKPS+EAIE AIRIANVDPKKTIFFDDSA
Sbjct: 162 NGVCKEGASEPEDNAADMAESNSFRPRSPILCKPSVEAIEAAIRIANVDPKKTIFFDDSA 221

Query: 160 RNIASAKAAGLHTVIVGSSVPVPPADHALNSIHNIKEAIPEIW-EGEGEQLEQVIQPAAV 218
           RNI S KAAGLHTVIVGSSV VP ADHAL SIHNIKEA+PEIW   EGEQLEQVIQ  AV
Sbjct: 222 RNITSGKAAGLHTVIVGSSVLVPGADHALGSIHNIKEALPEIWEGEEGEQLEQVIQSTAV 281

Query: 219 ETAVLA 224
           ET VLA
Sbjct: 282 ETVVLA 287

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356505699|ref|XP_003521627.1| PREDICTED: uncharacterized protein C24B11.05-like [Glycine max]

 Score =  333 bits (854), Expect = 3e-89,   Method: Compositional matrix adjust.
 Identities = 165/239 (69%), Positives = 196/239 (82%), Gaps = 16/239 (6%)

Query: 1   MSQHLHIDESEVPRMCLELYREHGTTMAGLKAVGYEFDNDEFHAFVHGKLPYEKLKPDPV 60
           M +HL ++ESEVP++C++LYRE+GTTMAGLKA GYEFDNDEFHA+VHG+LPYEKLKPDPV
Sbjct: 42  MLKHLLMEESEVPKLCVDLYREYGTTMAGLKAFGYEFDNDEFHAYVHGRLPYEKLKPDPV 101

Query: 61  LRNLLLSMPQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINP---RLQPAD---- 113
           LR+LLLSMPQRKI+FTNADQ HA +VL RLGL DCF+GIICFET+NP      P D    
Sbjct: 102 LRSLLLSMPQRKIVFTNADQAHAHQVLNRLGLNDCFDGIICFETLNPPNYTNVPTDTHLL 161

Query: 114 --------NTDGIENNSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASA 165
                   + + +E+  F+S  +ILCKPS+EAIE AI+IANVDP+KT+FFDDSARNIAS 
Sbjct: 162 TWSKSFNKDCNQVESGCFNSKTQILCKPSVEAIEAAIQIANVDPRKTLFFDDSARNIASG 221

Query: 166 KAAGLHTVIVGSSVPVPPADHALNSIHNIKEAIPEIWEGEGEQLEQVIQPAAVETAVLA 224
           KAAGL+TVIVG S  VP AD+ALNSIHNIKEA+P+IWE EGE L+Q+IQ  AVET VLA
Sbjct: 222 KAAGLNTVIVGRSDLVPGADYALNSIHNIKEALPKIWEVEGE-LQQMIQSPAVETMVLA 279

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356572862|ref|XP_003554584.1| PREDICTED: uncharacterized protein C24B11.05-like [Glycine max]

 Score =  331 bits (849), Expect = 1e-88,   Method: Compositional matrix adjust.
 Identities = 163/239 (68%), Positives = 196/239 (82%), Gaps = 16/239 (6%)

Query: 1   MSQHLHIDESEVPRMCLELYREHGTTMAGLKAVGYEFDNDEFHAFVHGKLPYEKLKPDPV 60
           M +HLH++ESEVP++C++LYRE+GTTMAGLKA G+EFDNDEFHA+VHG+LPY+KLKPDPV
Sbjct: 42  MLKHLHMEESEVPKICVDLYREYGTTMAGLKAFGHEFDNDEFHAYVHGRLPYKKLKPDPV 101

Query: 61  LRNLLLSMPQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINP---RLQPADN--- 114
           LRNLL SMPQRKI+FTNADQ HA +VL RLGL++CF+ IICFET+NP      P DN   
Sbjct: 102 LRNLLFSMPQRKIVFTNADQAHAHQVLNRLGLKECFDSIICFETLNPPNYTNVPTDNLAL 161

Query: 115 ---------TDGIENNSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASA 165
                     + +EN  F+S  +ILCKPS+EAIE AI+IAN+DP+KT+FFDDSARNIAS 
Sbjct: 162 TWSNSFNKDCNQVENRCFNSKTQILCKPSVEAIEVAIQIANLDPRKTLFFDDSARNIASG 221

Query: 166 KAAGLHTVIVGSSVPVPPADHALNSIHNIKEAIPEIWEGEGEQLEQVIQPAAVETAVLA 224
           KAAGL+TVIVG S  VP AD+AL+SIHNIKEA+PEIWE EGE L+Q+IQ  AVET VLA
Sbjct: 222 KAAGLNTVIVGRSDLVPGADYALSSIHNIKEALPEIWEVEGE-LQQMIQSPAVETMVLA 279

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388509590|gb|AFK42861.1| unknown [Medicago truncatula]

 Score =  331 bits (848), Expect = 1e-88,   Method: Compositional matrix adjust.
 Identities = 161/224 (71%), Positives = 181/224 (80%), Gaps = 15/224 (6%)

Query: 1   MSQHLHIDESEVPRMCLELYREHGTTMAGLKAVGYEFDNDEFHAFVHGKLPYEKLKPDPV 60
           M +HLHI+ES+VP+MCL+LY EHGTTMAG+KA+GYEFDND+FHA+VHG+LPYEKLKPD V
Sbjct: 49  MLEHLHIEESKVPKMCLDLYLEHGTTMAGMKALGYEFDNDDFHAYVHGRLPYEKLKPDFV 108

Query: 61  LRNLLLSMPQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIEN 120
           LRNLLLSMPQRKIIFTNAD  HA+EVL RLGLEDCFEGIICFET+NP             
Sbjct: 109 LRNLLLSMPQRKIIFTNADHTHAIEVLSRLGLEDCFEGIICFETLNP------------- 155

Query: 121 NSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP 180
              +S QRILCKPS+EA E AIRI NVDPKKTIFFDDS RN+AS K AGLHTVIVG S  
Sbjct: 156 --INSYQRILCKPSVEAFEAAIRIVNVDPKKTIFFDDSVRNVASGKVAGLHTVIVGRSDL 213

Query: 181 VPPADHALNSIHNIKEAIPEIWEGEGEQLEQVIQPAAVETAVLA 224
           VP ADHALNSIHNI+EA+PEIWE E    +Q+I+  AVE  V A
Sbjct: 214 VPGADHALNSIHNIREALPEIWEVEECNQQQMIRSLAVEATVHA 257

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297744067|emb|CBI37037.3| unnamed protein product [Vitis vinifera]

 Score =  322 bits (824), Expect = 8e-86,   Method: Compositional matrix adjust.
 Identities = 169/225 (75%), Positives = 186/225 (82%), Gaps = 15/225 (6%)

Query: 1   MSQHLHIDESEVPRMCLELYREHGTTMAGLKAVGYEFDNDEFHAFVHGKLPYEKLKPDPV 60
           M QHL+I+ESEVPRMCLELYRE+GTTMAGLKA+GYEFD+DEFHA+VHG+LPYE LKPDPV
Sbjct: 92  MLQHLNIEESEVPRMCLELYREYGTTMAGLKALGYEFDDDEFHAYVHGRLPYESLKPDPV 151

Query: 61  LRNLLLSMPQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIEN 120
           LRNLLLSMPQRKIIFTNAD++HA +VL RLGLE CFEG+ICFET+NP  +P +  + +E 
Sbjct: 152 LRNLLLSMPQRKIIFTNADREHAAQVLNRLGLEGCFEGVICFETLNPPPEPTEYNEELEG 211

Query: 121 NSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP 180
           N               AIE AIRIANVDPKKTIFFDDSARNI S KAAGLHTVIVGSSV 
Sbjct: 212 NG--------------AIEAAIRIANVDPKKTIFFDDSARNITSGKAAGLHTVIVGSSVL 257

Query: 181 VPPADHALNSIHNIKEAIPEIW-EGEGEQLEQVIQPAAVETAVLA 224
           VP ADHAL SIHNIKEA+PEIW   EGEQLEQVIQ  AVET VLA
Sbjct: 258 VPGADHALGSIHNIKEALPEIWEGEEGEQLEQVIQSTAVETVVLA 302

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	224
TAIR|locus:2079522	249	AT3G62040 [Arabidopsis thalian	0.937	0.843	0.685	3.9e-76
TAIR|locus:2185223	280	AT5G02230 [Arabidopsis thalian	1.0	0.8	0.508	2.5e-58
TAIR|locus:2148358	266	AT5G59490 [Arabidopsis thalian	0.982	0.827	0.517	1.4e-57
TAIR|locus:2148343	282	AT5G59480 [Arabidopsis thalian	0.982	0.780	0.504	4.6e-57
TAIR|locus:2045422	263	AT2G32150 [Arabidopsis thalian	0.830	0.707	0.458	7.9e-46
POMBASE|SPAC24B11.05	226	SPAC24B11.05 "pyrimidine 5'-nu	0.433	0.429	0.415	1.7e-19
DICTYBASE|DDB_G0293862	249	DDB_G0293862 "haloacid dehalog	0.428	0.385	0.35	2.5e-17
UNIPROTKB|G4MVR5	238	MGG_01783 "Uncharacterized pro	0.433	0.407	0.343	9.1e-17
TIGR_CMR|SPO_1374	214	SPO_1374 "pyrimidine 5'-nucleo	0.468	0.490	0.299	6.4e-12
SGD|S000000839	321	PHM8 "Lysophosphatidic acid (L	0.683	0.476	0.284	1.7e-08

TAIR|locus:2079522 AT3G62040 [Arabidopsis thaliana (taxid:3702)]

 Score = 767 (275.1 bits), Expect = 3.9e-76, P = 3.9e-76
 Identities = 155/226 (68%), Positives = 179/226 (79%)

Query:     1 MSQHLHIDESEVPRMCLELYREHGTTMAGLKAVGYEFDNDEFHAFVHGKLPYEKLKPDPV 60
             M   L I+ESEVP++CL+LY+E+GTTMAGLK +GYEFDNDEFH +VHG+LPYEKLKPDP+
Sbjct:    38 MLNQLGIEESEVPKLCLDLYKEYGTTMAGLKVMGYEFDNDEFHEYVHGRLPYEKLKPDPL 97

Query:    61 LRNLLLSMPQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIEN 120
             LRNLLLSMP RKIIFTNAD+ HA   L RLGLEDCFEGIICFET+NP             
Sbjct:    98 LRNLLLSMPHRKIIFTNADKAHATRALNRLGLEDCFEGIICFETLNP------------- 144

Query:   121 NSFSSNQRILCKPSLEAIETAIRIAN-VDPKKTIFFDDSARNIASAKAAGLHTVIVGSSV 179
              S  SN +ILCKPS+EA E AIRIA+ VDP+KTIFFDDS RNIASAKA GL TV VG SV
Sbjct:   145 -SSDSNTQILCKPSVEAFEAAIRIADIVDPRKTIFFDDSIRNIASAKATGLKTVFVGESV 203

Query:   180 PVPPADHALNSIHNIKEAIPEIWE-GEGEQLEQVIQPAAVETAVLA 224
              VP AD+AL+SIHNIKEAIP++WE  + E+LE ++Q AAV T V A
Sbjct:   204 LVPGADYALSSIHNIKEAIPDLWEDNKDEKLEPIVQQAAVATMVNA 249

GO:0005634 "nucleus" evidence=ISM

GO:0016787 "hydrolase activity" evidence=IEA;ISS

GO:0010167 "response to nitrate" evidence=RCA

GO:0015706 "nitrate transport" evidence=RCA

TAIR|locus:2185223 AT5G02230 [Arabidopsis thaliana (taxid:3702)]

 Score = 599 (215.9 bits), Expect = 2.5e-58, P = 2.5e-58
 Identities = 120/236 (50%), Positives = 165/236 (69%)

Query:     1 MSQHLHIDESEVPRMCLELYREHGTTMAGLKAVGYEFDNDEFHAFVHGKLPYEKLKPDPV 60
             M++ L I + ++  +   LY+ +GTTMAGL+A+GYEFD DE+H+FVHG+LPY+ +KPD V
Sbjct:    45 MTEKLGIPKDKIVELSDLLYKNYGTTMAGLRAIGYEFDYDEYHSFVHGRLPYDNIKPDLV 104

Query:    61 LRNLLLSMPQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETIN-PRLQPADNTDGIE 119
             LR+LLLS+P RK+IFTNAD+ HA + L +LGLEDCFEGIICFET+N      A N   I 
Sbjct:   105 LRSLLLSLPLRKVIFTNADRVHAAKALKKLGLEDCFEGIICFETLNLMHTNAASNNSEIF 164

Query:   120 N--NSFSSNQRI--------LCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAG 169
             +    F+ ++ +        +CKPS  AIE A+ IAN+DP +T+FF+DS RN+ + K  G
Sbjct:   165 DIVGHFNRSEPVGSLPKTPVVCKPSESAIEKALEIANIDPNRTLFFEDSVRNVQAGKRVG 224

Query:   170 LHTVIVGSSVPVPPADHALNSIHNIKEAIPEIWEGEGEQLEQVIQ-PAAVETAVLA 224
             L+TV+VG S  V  AD+AL +IHN+KEAIPE+WE + +  +       AVET+V A
Sbjct:   225 LYTVLVGKSTKVKGADYALENIHNMKEAIPELWESDRKSSDVGYSGKVAVETSVRA 280

GO:0003824 "catalytic activity" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

GO:0016787 "hydrolase activity" evidence=IEA;ISS

TAIR|locus:2148358 AT5G59490 [Arabidopsis thaliana (taxid:3702)]

 Score = 592 (213.5 bits), Expect = 1.4e-57, P = 1.4e-57
 Identities = 119/230 (51%), Positives = 159/230 (69%)

Query:     1 MSQHLHIDESEVPRMCLELYREHGTTMAGLKAVGYEFDNDEFHAFVHGKLPYEKLKPDPV 60
             M + L IDE  V  +   LY+++GT+MAGLKAVGYEFDNDE+H +VHG+LPYE LKPDPV
Sbjct:    41 MVEKLGIDEDGVVELNQILYKKYGTSMAGLKAVGYEFDNDEYHRYVHGRLPYENLKPDPV 100

Query:    61 LRNLLLSMPQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIEN 120
             LR+LLL +P RK++F+N D+ H M+ L RLG+EDCFE II FET+NP +  A+ +     
Sbjct:   101 LRSLLLGLPLRKLVFSNGDEVHVMKALTRLGIEDCFERIISFETLNPDINEAELS--CVT 158

Query:   121 NSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP 180
                  N  ++CKP+  A E A  IA ++P KT+FFDDS RNI + KA GLHTV+VG S  
Sbjct:   159 GHLPENP-VICKPTEIAFEKAFDIAQLNPHKTLFFDDSTRNIQTGKAVGLHTVLVGKSEK 217

Query:   181 VPPADHALNSIHNIKEAIPEIWEG------EGEQLEQVIQPAAVETAVLA 224
             +  +D+AL SIHN+KEA PE+W        E E+++   Q  ++ET+V A
Sbjct:   218 IDGSDYALESIHNMKEAFPELWSESIINNKETERIDYASQ-ISIETSVQA 266

GO:0005634 "nucleus" evidence=ISM

GO:0016787 "hydrolase activity" evidence=IEA;ISS

TAIR|locus:2148343 AT5G59480 [Arabidopsis thaliana (taxid:3702)]

 Score = 587 (211.7 bits), Expect = 4.6e-57, P = 4.6e-57
 Identities = 119/236 (50%), Positives = 162/236 (68%)

Query:     1 MSQHLHIDESEVPRMCLELYREHGTTMAGLKAVGYEFDNDEFHAFVHGKLPYEKLKPDPV 60
             M Q L I+E +V  +CL LY+ +GTTMAGLKAVGY+FD D+FH FVHG+LPY  LKPDP+
Sbjct:    45 MVQKLGIEEDKVQELCLSLYKIYGTTMAGLKAVGYDFDYDDFHRFVHGRLPYSTLKPDPI 104

Query:    61 LRNLLLSMPQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQ---PADN-TD 116
             LRN++LS+P RK++FTNAD+ HA +++ RLGLE CFE II FET+NP  +   P D  T 
Sbjct:   105 LRNIILSLPIRKVVFTNADKAHAAKIIARLGLEGCFEKIISFETLNPITKTESPVDTKTR 164

Query:   117 GI-ENNSFSSNQ---------RILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAK 166
              I +  S+ +N           ++CKPS  A E   ++AN++PKKT+FFDDS RNI + K
Sbjct:   165 EIFDIISYMANPDSSIELPKTSVVCKPSEGAFEQVFKMANINPKKTLFFDDSIRNIQTGK 224

Query:   167 AAGLHTVIVGSSVPVPPADHALNSIHNIKEAIPEIWEGEGEQLEQVI--QPAAVET 220
               GLHTV VG+S      D AL  IHNI+EA+P++W+   ++ +++   Q  A+ET
Sbjct:   225 RVGLHTVWVGTSHREEGVDIALEHIHNIREALPQLWDAVDDKAKEIRTRQKVAIET 280

GO:0005634 "nucleus" evidence=ISM

GO:0016787 "hydrolase activity" evidence=IEA;ISS

GO:0015824 "proline transport" evidence=RCA

TAIR|locus:2045422 AT2G32150 [Arabidopsis thaliana (taxid:3702)]

 Score = 481 (174.4 bits), Expect = 7.9e-46, P = 7.9e-46
 Identities = 89/194 (45%), Positives = 136/194 (70%)

Query:     9 ESEVPRMCLELYREHGTTMAGLKAVGYEFDNDEFHAFVHGKLPYEKLKPDPVLRNLLLSM 68
             ES+   + +EL++ +G+T+AGL+A+G++   DE+H+FVHG+LPY  ++P+  LRNLL  +
Sbjct:    44 ESKASSLRVELFKTYGSTLAGLRALGHDVHPDEYHSFVHGRLPYGSIEPNNKLRNLLNKI 103

Query:    69 PQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQR 128
              QRKIIFTN+D+ HA++VL +LGLEDCFE +ICFET+NP L          + +      
Sbjct:   104 KQRKIIFTNSDKNHAVKVLKKLGLEDCFEEMICFETMNPNL--------FGSTTRPDEYP 155

Query:   129 ILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVPVPPADHAL 188
             ++ KPSL A++  IR+ANVDP++T+F DD+  NI + K+ GL T++VG +     AD+A+
Sbjct:   156 VVLKPSLTAMDICIRVANVDPRRTVFLDDNIHNITAGKSVGLRTILVGRAEKTKDADYAV 215

Query:   189 NSIHNIKEAIPEIW 202
              ++  I  A+PEIW
Sbjct:   216 ETVTEIATAVPEIW 229

GO:0003824 "catalytic activity" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

GO:0016787 "hydrolase activity" evidence=IEA;ISS

POMBASE|SPAC24B11.05 SPAC24B11.05 "pyrimidine 5'-nucleotidase (predicted)" [Schizosaccharomyces pombe (taxid:4896)]

 Score = 152 (58.6 bits), Expect = 1.7e-19, Sum P(2) = 1.7e-19
 Identities = 42/101 (41%), Positives = 56/101 (55%)

Query:     2 SQHLHIDESEVPRMCLELYREHGTTMAGLKAVGYEFDNDEFHAFVHGKLPYEK-LKPDPV 60
             S  L I   E  R+    YR +G  + GL  + +E D  ++   V   LP EK +K D V
Sbjct:    36 SDKLGIPTEEAERLREVYYRHYGIAIRGL-VLHHEIDAVDYDQRVDQSLPLEKVIKKDEV 94

Query:    61 LRNLLLSMPQR-KI-IFTNADQKHAMEVLGRLGLEDCFEGI 99
             LR +LL + ++ K  IFTNA   HA  VL  LG+EDCF+GI
Sbjct:    95 LREMLLELRKKYKCWIFTNAYIVHANRVLKYLGIEDCFDGI 135

GO:0005634 "nucleus" evidence=ISO;IDA

GO:0005737 "cytoplasm" evidence=ISO

GO:0005829 "cytosol" evidence=IDA

GO:0006206 "pyrimidine nucleobase metabolic process" evidence=ISO

GO:0008252 "nucleotidase activity" evidence=ISO

GO:0047405 "pyrimidine-5'-nucleotide nucleosidase activity" evidence=NAS

DICTYBASE|DDB_G0293862 DDB_G0293862 "haloacid dehalogenase-like hydrolase" [Dictyostelium discoideum (taxid:44689)]

 Score = 138 (53.6 bits), Expect = 2.5e-17, Sum P(2) = 2.5e-17
 Identities = 35/100 (35%), Positives = 56/100 (56%)

Query:     1 MSQHLHIDESEVPRMCLELYREHGTTMAGLKAVGYEFDNDEFHAFVHGKLPYEK-LKPDP 59
             MS  L++   EV ++    Y+ +G T+ GL  + +E + D++  +VHG L  +  LKPD 
Sbjct:    51 MSIILNLPMEEVDKVRNHYYKTYGLTLKGLM-MNHEVNIDKYLDYVHGGLDLKSHLKPDA 109

Query:    60 VLRNLLLSMPQ--RKIIFTNADQKHAMEVLGRLGLEDCFE 97
              L   L S+    +K+IF+NAD  H   V   L ++DCF+
Sbjct:   110 RLHACLKSVKSGVKKVIFSNADIGHCKRVTRELEIDDCFD 149

GO:0016787 "hydrolase activity" evidence=IEA

GO:0005575 "cellular_component" evidence=ND

UNIPROTKB|G4MVR5 MGG_01783 "Uncharacterized protein" [Magnaporthe oryzae 70-15 (taxid:242507)]

 Score = 138 (53.6 bits), Expect = 9.1e-17, Sum P(2) = 9.1e-17
 Identities = 35/102 (34%), Positives = 57/102 (55%)

Query:     2 SQHLHIDESEVPRMCLELYREHGTTMAGLKAVGYEFDNDEFHAFVHGKLPYEKL-KPDPV 60
             ++HL +   E  R+  E Y+ +G  + GL    ++ D  E+++ V   LP E + KP+P 
Sbjct:    47 AEHLSLSWDEAVRLHKEYYQNYGLAIEGLVR-HHQIDPLEYNSKVDDALPLEGIIKPNPQ 105

Query:    61 LRNLLLSMPQRKI---IFTNADQKHAMEVLGRLGLEDCFEGI 99
             LR +L  + + K+   +FTNA   HA  V+  L +ED F+GI
Sbjct:   106 LRKMLEDIDRSKVKLWLFTNAYVNHARRVVRLLEIEDLFDGI 147

GO:0005575 "cellular_component" evidence=ND

TIGR_CMR|SPO_1374 SPO_1374 "pyrimidine 5'-nucleotidase" [Ruegeria pomeroyi DSS-3 (taxid:246200)]

 Score = 130 (50.8 bits), Expect = 6.4e-12, Sum P(2) = 6.4e-12
 Identities = 32/107 (29%), Positives = 54/107 (50%)

Query:     5 LHIDESEVPRMCLELYREHGTTMAGLKAVGYEFDNDEFHAFVHGKLPYEKLKPDPVLRNL 64
             L +  +E  R+    +R++GTT+AGL    +  D D +   VH ++    + PD  L + 
Sbjct:    43 LGVTRAEADRLRAHYWRQYGTTLAGLMRE-HGLDPDPYLVAVH-EVDMSHMTPDTALASH 100

Query:    65 LLSMPQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQP 111
             + ++P R+I++TN    +A  VL   GL   F+ I   E    R +P
Sbjct:   101 IRALPGRRIVYTNGSAPYAERVLAARGLTGLFDAIYGVEHAGYRPKP 147

GO:0006206 "pyrimidine nucleobase metabolic process" evidence=ISS

GO:0008253 "5'-nucleotidase activity" evidence=ISS

SGD|S000000839 PHM8 "Lysophosphatidic acid (LPA) phosphatase involved in LPA hydrolysis" [Saccharomyces cerevisiae (taxid:4932)]

 Score = 147 (56.8 bits), Expect = 1.7e-08, P = 1.7e-08
 Identities = 51/179 (28%), Positives = 85/179 (47%)

Query:     5 LHIDESEVPRMCLELYREHGTTMAGLKAVGYEFDNDEFHAFVHGKLPYEK-LKPDPVLRN 63
             L  D+ E  R+    Y+E+G ++ GL       D  +++ F+   LP +  LKPD  LR 
Sbjct:    86 LGFDDDEAERLIESYYQEYGLSVKGLIKNKQIDDVLQYNTFIDDSLPLQDYLKPDWKLRE 145

Query:    64 LLLSMPQRKI-------IFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTD 116
             LL+++ ++K+       +FTN+ + HA+  +  LG+ D F+GI       P         
Sbjct:   146 LLINLKKKKLGKFDKLWLFTNSYKNHAIRCVKILGIADLFDGITYCHYDRP--------- 196

Query:   117 GIENNSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFF-DDSARNIASAKAAGLHTVI 174
              IE       +  +CKP  +  ETA   + +      +F DD+  N+ SA + G+  VI
Sbjct:   197 -IE-------EEFICKPDPKFFETAKLQSGLSSFANAWFIDDNESNVRSALSMGMGHVI 247

GO:0016787 "hydrolase activity" evidence=IEA

GO:0005737 "cytoplasm" evidence=IDA

GO:0016036 "cellular response to phosphate starvation" evidence=IEP;IMP

GO:0005634 "nucleus" evidence=IDA

GO:0052642 "lysophosphatidic acid phosphatase activity" evidence=IMP;IDA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q09893	YAI5_SCHPO	No assigned EC number	0.3364	0.8169	0.8097	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	3.1.3	LOW CONFIDENCE prediction!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: fgenesh4_pg.C_LG_XIV000513 hypothetical protein (261 aa) (Populus trichocarpa)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	224
TIGR01993	183	TIGR01993, Pyr-5-nucltdase, pyrimidine 5'-nucleoti	9e-76
TIGR01509	177	TIGR01509, HAD-SF-IA-v3, haloacid dehalogenase sup	1e-22
pfam13419	176	pfam13419, HAD_2, Haloacid dehalogenase-like hydro	3e-17
COG1011	229	COG1011, COG1011, Predicted hydrolase (HAD superfa	2e-16
cd01427	139	cd01427, HAD_like, Haloacid dehalogenase-like hydr	5e-11
COG0637	221	COG0637, COG0637, Predicted phosphatase/phosphohex	3e-09
COG0546	220	COG0546, Gph, Predicted phosphatases [General func	8e-09
pfam13242	74	pfam13242, Hydrolase_like, HAD-hyrolase-like	1e-07
TIGR02253	221	TIGR02253, CTE7, HAD superfamily (subfamily IA) hy	3e-07
pfam00702	187	pfam00702, Hydrolase, haloacid dehalogenase-like h	1e-05
PRK13222	226	PRK13222, PRK13222, phosphoglycolate phosphatase;	2e-05
PLN02940	382	PLN02940, PLN02940, riboflavin kinase	3e-04
PRK09456	199	PRK09456, PRK09456, ?-D-glucose-1-phosphatase; Pro	6e-04
COG0647	269	COG0647, NagD, Predicted sugar phosphatases of the	0.003
TIGR02247	211	TIGR02247, HAD-1A3-hyp, epoxide hydrolase N-termin	0.004

>gnl|CDD|233675 TIGR01993, Pyr-5-nucltdase, pyrimidine 5'-nucleotidase

 Score =  226 bits (578), Expect = 9e-76
 Identities = 88/175 (50%), Positives = 114/175 (65%), Gaps = 21/175 (12%)

Query: 1   MSQHLHIDESEVPRMCLELYREHGTTMAGLKAVGYEFDNDEFHAFVHGKLPYEKLKPDPV 60
           ++  L +   E   +  + Y+E+GTT+AGL  + +E D DE+  +VHG+LPY+KLKPDP 
Sbjct: 30  VAARLKLSPEEARVLRKDYYKEYGTTLAGLMIL-HEIDADEYLRYVHGRLPYDKLKPDPE 88

Query: 61  LRNLLLSMPQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIEN 120
           LRNLLL +P RKIIFTN D+ HA   L RLG+EDCF+GI CF+T NP L           
Sbjct: 89  LRNLLLRLPGRKIIFTNGDRAHARRALRRLGIEDCFDGIFCFDTANPDL----------- 137

Query: 121 NSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIV 175
                    L KPS +A E A+R A VDP++ IFFDDSARNIA+ KA G+ TV+V
Sbjct: 138 ---------LPKPSPQAYEKALREAGVDPERAIFFDDSARNIAAGKALGMKTVLV 183

This family of proteins includes the SDT1/SSM1 gene from yeast which has been shown to code for a pyrimidine (UMP/CMP) 5'nucleotidase. The family spans plants, fungi and a small number of bacteria. These enzymes are members of the haloacid dehalogenase (HAD) superfamily of hydrolases, specifically the IA subfamily (variant 3, TIGR01509). Length = 183

>gnl|CDD|233443 TIGR01509, HAD-SF-IA-v3, haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED

 Score = 90.2 bits (224), Expect = 1e-22
 Identities = 46/177 (25%), Positives = 71/177 (40%), Gaps = 34/177 (19%)

Query: 3   QHLHIDESEVPRMCLELYR-EHGTTMAGLKAVGYEFDNDEFHAFVHGKLPYEKLKPDPVL 61
             L + E     + L  ++ ++G TM+   A            F         LKP P +
Sbjct: 31  DELGVSEVGSLELALRRWKAKYGRTMSAEDAQLLYK-----QLFYEALEKEG-LKPLPGV 84

Query: 62  RNLLLSMPQR---KIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGI 118
           R LL ++  R     + TN+ +  A  VL  LGL   F+ +I                  
Sbjct: 85  RALLEALRARGKKLALLTNSPRADAKLVL-ELGLRALFDVVID----------------- 126

Query: 119 ENNSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIV 175
                 S+   L KP  +    A++   + P + +F DDS   I +AKAAG+HTV+V
Sbjct: 127 ------SSDVGLGKPDPDIYLQALKKLGLKPSECLFVDDSPAGIDAAKAAGMHTVLV 177

This model represents part of one structural subfamily of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The superfamily is defined by the presence of three short catalytic motifs. The subfamilies are defined based on the location and the observed or predicted fold of a so-called "capping domain", or the absence of such a domain. Subfamily I consists of sequences in which the capping domain is found in between the first and second catalytic motifs. Subfamily II consists of sequences in which the capping domain is found between the second and third motifs. Subfamily III sequences have no capping domain in either of these positions.The Subfamily IA and IB capping domains are predicted by PSI-PRED to consist of an alpha helical bundle. Subfamily I encompasses such a wide region of sequence space (the sequences are highly divergent) that representing it with a single model is impossible, resulting in an overly broad description which allows in many unrelated sequences. Subfamily IA and IB are separated based on an aparrent phylogenetic bifurcation. Subfamily IA is still too broad to model, but cannot be further subdivided into large chunks based on phylogenetic trees. Of the three motifs defining the HAD superfamily, the third has three variant forms : (1) hhhhsDxxx(x)D, (2) hhhhssxxx(x)D and (3) hhhhDDxxx(x)s where _s_ refers to a small amino acid and _h_ to a hydrophobic one. All three of these variants are found in subfamily IA. Individual models were made based on seeds exhibiting only one of the variants each. Variant 3 (this model) is found in the enzymes beta-phosphoglucomutase (TIGR01990) and deoxyglucose-6-phosphatase, while many other enzymes of subfamily IA exhibit this variant as well as variant 1 (TIGR01549). These three variant models were created withthe knowledge that there will be overlap among them - this is by design and serves the purpose of eliminating the overlap with models of more distantly relatedHAD subfamilies caused by an overly broad single model [Unknown function, Enzymes of unknown specificity]. Length = 177

>gnl|CDD|222115 pfam13419, HAD_2, Haloacid dehalogenase-like hydrolase

 Score = 75.8 bits (187), Expect = 3e-17
 Identities = 38/174 (21%), Positives = 67/174 (38%), Gaps = 29/174 (16%)

Query: 8   DESEVPRMCLELYREHGTTMA-GLKAVGYEFDND--EFHAFVHGKLPYEKLKPDPVLRNL 64
           +   +     EL    G      L  +  E   D  E    +       +L+P P +  L
Sbjct: 26  ERLGLDISAEELREAGGLPFDEALADLLREHPIDPDEILEALLEYNLESRLEPFPDVVEL 85

Query: 65  LLSMPQ---RKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENN 121
           L  +     + +I +N  ++    +L +LGL D F+ +   + +  R             
Sbjct: 86  LRRLKAKGVKLVILSNGSREAVERLLEKLGLLDLFDAVFTSDDVGAR------------- 132

Query: 122 SFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIV 175
                     KP  EA E  +    + P++ +F DDS  ++ +A+AAG+ TV V
Sbjct: 133 ----------KPDPEAYERVLERLGLPPEEILFIDDSPEDLEAARAAGIKTVHV 176

Length = 176

>gnl|CDD|223943 COG1011, COG1011, Predicted hydrolase (HAD superfamily) [General function prediction only]

 Score = 74.9 bits (184), Expect = 2e-16
 Identities = 48/203 (23%), Positives = 72/203 (35%), Gaps = 30/203 (14%)

Query: 6   HIDESEVPRMCLELYREHGTTMAGLKAVGYEFDNDEFHAFVHGKLP-YEKLKPDPVLRNL 64
            I++ E   +  E   E+G T+  L  +      DE    V   L    KL PD      
Sbjct: 47  LIEKLEARFLRGEYTGEYGLTLERLLELLERLLGDEDAELVEELLAALAKLLPDYPEALE 106

Query: 65  LLSMPQRK---IIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENN 121
            L    +K    I TN  + H    L +LGL D F+ +   E +                
Sbjct: 107 ALKELGKKYKLGILTNGARPHQERKLRQLGLLDYFDAVFISEDVG--------------- 151

Query: 122 SFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARN-IASAKAAGLHTV--IVGSS 178
                   + KP  E  E A+    V P++ +F  DS  N I  A+A G+ TV    G  
Sbjct: 152 --------VAKPDPEIFEYALEKLGVPPEEALFVGDSLENDILGARALGMKTVWINRGGK 203

Query: 179 VPVPPADHALNSIHNIKEAIPEI 201
                 +     I ++ E +  +
Sbjct: 204 PLPDALEAPDYEISSLAELLDLL 226

Length = 229

>gnl|CDD|119389 cd01427, HAD_like, Haloacid dehalogenase-like hydrolases

 Score = 58.2 bits (141), Expect = 5e-11
 Identities = 27/104 (25%), Positives = 46/104 (44%), Gaps = 9/104 (8%)

Query: 73  IIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILC- 131
            + TN  ++  +E+L  LGL+D F+ +I                  +   F         
Sbjct: 44  ALATNKSRREVLELLEELGLDDYFDPVITSNGAAIYY--------PKEGLFLGGGPFDIG 95

Query: 132 KPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIV 175
           KP+ + +  A+++  VDP++ +   DS  +I  AKAAG   V V
Sbjct: 96  KPNPDKLLAALKLLGVDPEEVLMVGDSLNDIEMAKAAGGLGVAV 139

The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases. Length = 139

>gnl|CDD|223710 COG0637, COG0637, Predicted phosphatase/phosphohexomutase [General function prediction only]

 Score = 55.1 bits (133), Expect = 3e-09
 Identities = 48/212 (22%), Positives = 75/212 (35%), Gaps = 32/212 (15%)

Query: 5   LHIDESEVPRMCLELYREHGTTMAGLKAVGYEFDNDEFHA--FVHGKLPYEKLKPDPVLR 62
           + I + E+  +           +  L A     D  E     +    L  E LKP P + 
Sbjct: 33  IEISDEEIRELHGGGIARIIDLLRKLAAGEDPADLAELERLLYEAEALELEGLKPIPGVV 92

Query: 63  NLLLSMPQRKIIF---TNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIE 119
            LL  +  R I     +++ ++ A  VL RLGL D F+ I+               D   
Sbjct: 93  ELLEQLKARGIPLAVASSSPRRAAERVLARLGLLDYFDVIV------------TADDVAR 140

Query: 120 NNSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSV 179
                       KP+ +    A     VDP++ +  +DS   I +AKAAG+  V V +  
Sbjct: 141 G-----------KPAPDIYLLAAERLGVDPEECVVVEDSPAGIQAAKAAGMRVVGVPAGH 189

Query: 180 PVPPADHALNSIHNIKEA----IPEIWEGEGE 207
             P  D       +        +P + E  G 
Sbjct: 190 DRPHLDPLDAHGADTVLLDLAELPALLEARGI 221

Length = 221

>gnl|CDD|223620 COG0546, Gph, Predicted phosphatases [General function prediction only]

 Score = 53.6 bits (129), Expect = 8e-09
 Identities = 31/131 (23%), Positives = 52/131 (39%), Gaps = 26/131 (19%)

Query: 74  IFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCKP 133
           I TN  ++    +L  LGL D F+ I+  + + P                        KP
Sbjct: 110 IVTNKPERELDILLKALGLADYFDVIVGGDDVPPP-----------------------KP 146

Query: 134 SLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIV--GSSVPVPPADH-ALNS 190
             E +   +    +DP++ +   DS  +I +AKAAG+  V V  G +     A   A   
Sbjct: 147 DPEPLLLLLEKLGLDPEEALMVGDSLNDILAAKAAGVPAVGVTWGYNSREELAQAGADVV 206

Query: 191 IHNIKEAIPEI 201
           I ++ E +  +
Sbjct: 207 IDSLAELLALL 217

Length = 220

>gnl|CDD|222003 pfam13242, Hydrolase_like, HAD-hyrolase-like

 Score = 46.9 bits (112), Expect = 1e-07
 Identities = 18/71 (25%), Positives = 37/71 (52%), Gaps = 8/71 (11%)

Query: 132 KPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSV--------PVPP 183
           KP+   +  A+    VDP++ +   DS  +I +A+AAG+ T++V + V            
Sbjct: 4   KPNPGMLRAALERLGVDPEECVMIGDSDTDILAARAAGIRTILVLTGVTTAEDLERAPGR 63

Query: 184 ADHALNSIHNI 194
            D+ ++S+ ++
Sbjct: 64  PDYVVDSLADL 74

Length = 74

>gnl|CDD|162787 TIGR02253, CTE7, HAD superfamily (subfamily IA) hydrolase, TIGR02253

 Score = 49.3 bits (118), Expect = 3e-07
 Identities = 43/182 (23%), Positives = 76/182 (41%), Gaps = 34/182 (18%)

Query: 3   QHLHIDESEVPRMCLELYREHGTTMAG-----LKAVGYEFDNDEFHAFV--HGKLPYEKL 55
             L++D  E     L+L +E+G+         ++ +  E++     AFV  + KL +  L
Sbjct: 34  AGLNVDFEEAYEELLKLIKEYGSNYPTHFDYLIRRLWEEYNPKLVAAFVYAYHKLKFAYL 93

Query: 56  KPDPVLRNLLLSMPQ---RKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPA 112
           +  P +R+ L+ + +   R  I T+       E L RLG+ D F+ +I  E         
Sbjct: 94  RVYPGVRDTLMELRESGYRLGIITDGLPVKQWEKLERLGVRDFFDAVITSEEE------- 146

Query: 113 DNTDGIENNSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSA-RNIASAKAAGLH 171
               G+E            KP  +    A++   V P++ +   D   ++I  AK  G+ 
Sbjct: 147 ----GVE------------KPHPKIFYAALKRLGVKPEEAVMVGDRLDKDIKGAKNLGMK 190

Query: 172 TV 173
           TV
Sbjct: 191 TV 192

This family of sequences from archaea and metazoans includes the human uncharacterized protein CTE7. Pyrococcus species appear to have three different forms of this enzyme, so it is unclear whether all members of this family have the same function. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Length = 221

>gnl|CDD|216069 pfam00702, Hydrolase, haloacid dehalogenase-like hydrolase

 Score = 43.8 bits (103), Expect = 1e-05
 Identities = 24/121 (19%), Positives = 41/121 (33%), Gaps = 26/121 (21%)

Query: 52  YEKLKPDPVLRNLLLSMPQRKI---IFTNADQKHAMEVLGRLGLEDCFEGIICFETINPR 108
                  P  R  L  + +  I   I T  ++  A  +   LGL   F+ ++  +     
Sbjct: 90  ALTDPLYPGAREALKELKEAGIKLAILTGDNRLTANAIARLLGL---FDALVSADLYGLV 146

Query: 109 LQPADNTDGIENNSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAA 168
                                + KP  +  E A+    V P++ +   D   +I +AKAA
Sbjct: 147 --------------------GVGKPDPKIFELALEELGVKPEEVLMVGDGVNDIPAAKAA 186

Query: 169 G 169
           G
Sbjct: 187 G 187

This family is structurally different from the alpha/beta hydrolase family (pfam00561). This family includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure of the family consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of Pseudomonas sp. (S)-2-haloacid dehalogenase 1. The rest of the fold is composed of the core alpha/beta domain. Those members with the characteristic DxD triad at the N-terminus are probably phosphatidylglycerolphosphate (PGP) phosphatases involved in cardiolipin biosynthesis in the mitochondria. Length = 187

>gnl|CDD|237310 PRK13222, PRK13222, phosphoglycolate phosphatase; Provisional

 Score = 43.6 bits (104), Expect = 2e-05
 Identities = 26/112 (23%), Positives = 43/112 (38%), Gaps = 25/112 (22%)

Query: 76  TNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCKPSL 135
           TN        +L  LG+ D F  +I  +++  +                       KP  
Sbjct: 116 TNKPTPFVAPLLEALGIADYFSVVIGGDSLPNK-----------------------KPDP 152

Query: 136 EAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIV--GSSVPVPPAD 185
             +  A     +DP++ +F  DS  +I +A+AAG  +V V  G +   P A 
Sbjct: 153 APLLLACEKLGLDPEEMLFVGDSRNDIQAARAAGCPSVGVTYGYNYGEPIAL 204

Length = 226

>gnl|CDD|178528 PLN02940, PLN02940, riboflavin kinase

 Score = 40.6 bits (95), Expect = 3e-04
 Identities = 23/76 (30%), Positives = 38/76 (50%), Gaps = 9/76 (11%)

Query: 132 KPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP-----VPPADH 186
           KPS +    A +  NV+P   +  +DS   + + KAAG+  + V  S+P        AD 
Sbjct: 150 KPSPDIFLEAAKRLNVEPSNCLVIEDSLPGVMAGKAAGMEVIAV-PSIPKQTHLYSSADE 208

Query: 187 ALNSIHNIKEAIPEIW 202
            +NS+ +++   PE W
Sbjct: 209 VINSLLDLQ---PEKW 221

Length = 382

>gnl|CDD|181872 PRK09456, PRK09456, ?-D-glucose-1-phosphatase; Provisional

 Score = 39.3 bits (92), Expect = 6e-04
 Identities = 14/51 (27%), Positives = 25/51 (49%)

Query: 132 KPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVPVP 182
           KP     +  ++         +FFDD+A NI +A A G+ +++V     +P
Sbjct: 141 KPEARIYQHVLQAEGFSAADAVFFDDNADNIEAANALGITSILVTDKQTIP 191

Length = 199

>gnl|CDD|223720 COG0647, NagD, Predicted sugar phosphatases of the HAD superfamily [Carbohydrate transport and metabolism]

 Score = 37.6 bits (88), Expect = 0.003
 Identities = 22/80 (27%), Positives = 36/80 (45%), Gaps = 11/80 (13%)

Query: 132 KPSLEAIETAIRIANVDPKKTIFFDDSARN-IASAKAAGLHTVIVGSSV---------PV 181
           KPS    E A+    +D  + +   D     I  AKAAGL T++V + V          V
Sbjct: 190 KPSPAIYEAALEKLGLDRSEVLMVGDRLDTDILGAKAAGLDTLLVLTGVSSAEDLDRAEV 249

Query: 182 PPADHALNSIHNIKEAIPEI 201
            P  + ++S+  +  A+ E+
Sbjct: 250 KP-TYVVDSLAELITALKEL 268

Length = 269

>gnl|CDD|233800 TIGR02247, HAD-1A3-hyp, epoxide hydrolase N-terminal domain-like phosphatase

 Score = 36.7 bits (85), Expect = 0.004
 Identities = 14/49 (28%), Positives = 22/49 (44%)

Query: 130 LCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSS 178
           L KP     +  +    V P++ +F DD   N+  A A G+ T+ V   
Sbjct: 150 LRKPDPRIYQLMLERLGVAPEECVFLDDLGSNLKPAAALGITTIKVSDE 198

This model represents a small clade of sequences including C. elegans and mammalian sequences as well as a small number of bacteria. In eukaryotes, this domain exists as an N-terminal fusion to the soluble epoxide hydrolase enzyme and has recently been shown to be an active phosphatase, although the nature of the biological substrate is unclear. These appear to be members of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases by general homology and the conservation of all of the recognized catalytic motifs (although the first motif is unusual in the replacement of the more common aspartate with glycine...). The variable domain is found in between motifs 1 and 2, indicating membership in subfamily I and phylogeny and prediction of the alpha helical nature of the variable domain (by PSI-PRED) indicate membership in subfamily IA. Length = 211

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	224
KOG3109	244	consensus Haloacid dehalogenase-like hydrolase [Ge	99.97
TIGR01993	184	Pyr-5-nucltdase pyrimidine 5'-nucleotidase. These	99.89
TIGR01422	253	phosphonatase phosphonoacetaldehyde hydrolase. Thi	99.86
PRK13288	214	pyrophosphatase PpaX; Provisional	99.86
PLN03243	260	haloacid dehalogenase-like hydrolase; Provisional	99.85
TIGR01449	213	PGP_bact 2-phosphoglycolate phosphatase, prokaryot	99.85
PRK10563	221	6-phosphogluconate phosphatase; Provisional	99.85
COG0546	220	Gph Predicted phosphatases [General function predi	99.85
PLN02770	248	haloacid dehalogenase-like hydrolase family protei	99.85
TIGR01454	205	AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthes	99.85
PRK09449	224	dUMP phosphatase; Provisional	99.85
TIGR03351	220	PhnX-like phosphonatase-like hydrolase. This clade	99.84
PRK13478	267	phosphonoacetaldehyde hydrolase; Provisional	99.84
PRK13226	229	phosphoglycolate phosphatase; Provisional	99.84
COG1011	229	Predicted hydrolase (HAD superfamily) [General fun	99.83
TIGR02254	224	YjjG/YfnB HAD superfamily (subfamily IA) hydrolase	99.83
TIGR02253	221	CTE7 HAD superfamily (subfamily IA) hydrolase, TIG	99.83
PRK14988	224	GMP/IMP nucleotidase; Provisional	99.83
PLN02575	381	haloacid dehalogenase-like hydrolase	99.82
PLN02940	382	riboflavin kinase	99.81
TIGR01428	198	HAD_type_II 2-haloalkanoic acid dehalogenase, type	99.81
PRK11587	218	putative phosphatase; Provisional	99.81
PRK10826	222	2-deoxyglucose-6-phosphatase; Provisional	99.8
PRK13225	273	phosphoglycolate phosphatase; Provisional	99.8
PRK13223	272	phosphoglycolate phosphatase; Provisional	99.8
PRK13222	226	phosphoglycolate phosphatase; Provisional	99.79
COG0637	221	Predicted phosphatase/phosphohexomutase [General f	99.79
PLN02811	220	hydrolase	99.78
PRK10748	238	flavin mononucleotide phosphatase; Provisional	99.78
PRK10725	188	fructose-1-P/6-phosphogluconate phosphatase; Provi	99.77
PF13419	176	HAD_2: Haloacid dehalogenase-like hydrolase; PDB:	99.76
PRK06769	173	hypothetical protein; Validated	99.75
TIGR01990	185	bPGM beta-phosphoglucomutase. The enzyme from L. l	99.75
TIGR00213	176	GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase	99.74
PRK09456	199	?-D-glucose-1-phosphatase; Provisional	99.74
PRK08942	181	D,D-heptose 1,7-bisphosphate phosphatase; Validate	99.74
PRK06698	459	bifunctional 5'-methylthioadenosine/S-adenosylhomo	99.73
TIGR01509	183	HAD-SF-IA-v3 haloacid dehalogenase superfamily, su	99.72
PLN02779	286	haloacid dehalogenase-like hydrolase family protei	99.72
TIGR02009	185	PGMB-YQAB-SF beta-phosphoglucomutase family hydrol	99.7
TIGR02252	203	DREG-2 REG-2-like, HAD superfamily (subfamily IA)	99.7
TIGR02247	211	HAD-1A3-hyp Epoxide hydrolase N-terminal domain-li	99.69
PHA02597	197	30.2 hypothetical protein; Provisional	99.69
PLN02919	1057	haloacid dehalogenase-like hydrolase family protei	99.68
TIGR01656	147	Histidinol-ppas histidinol-phosphate phosphatase f	99.65
TIGR01261	161	hisB_Nterm histidinol-phosphatase. This model desc	99.64
TIGR01493	175	HAD-SF-IA-v2 Haloacid dehalogenase superfamily, su	99.64
TIGR01691	220	enolase-ppase 2,3-diketo-5-methylthio-1-phosphopen	99.62
TIGR01685	174	MDP-1 magnesium-dependent phosphatase-1. This mode	99.61
TIGR01662	132	HAD-SF-IIIA HAD-superfamily hydrolase, subfamily I	99.58
TIGR01548	197	HAD-SF-IA-hyp1 haloacid dehalogenase superfamily,	99.55
KOG3085	237	consensus Predicted hydrolase (HAD superfamily) [G	99.53
TIGR01549	154	HAD-SF-IA-v1 haloacid dehalogenase superfamily, su	99.52
TIGR01668	170	YqeG_hyp_ppase HAD superfamily (subfamily IIIA) ph	99.5
TIGR01458	257	HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydr	99.48
TIGR00338	219	serB phosphoserine phosphatase SerB. Phosphoserine	99.48
TIGR01664	166	DNA-3'-Pase DNA 3'-phosphatase. The central phosph	99.46
PF13242	75	Hydrolase_like: HAD-hyrolase-like; PDB: 2P27_A 2OY	99.44
KOG2914	222	consensus Predicted haloacid-halidohydrolase and r	99.44
PHA02530	300	pseT polynucleotide kinase; Provisional	99.42
PRK05446	354	imidazole glycerol-phosphate dehydratase/histidino	99.4
PRK09552	219	mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosp	99.39
smart00577	148	CPDc catalytic domain of ctd-like phosphatases.	99.39
cd01427	139	HAD_like Haloacid dehalogenase-like hydrolases. Th	99.37
TIGR01452	279	PGP_euk phosphoglycolate/pyridoxal phosphate phosp	99.36
TIGR01491	201	HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPa	99.35
TIGR01670	154	YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-pho	99.35
PRK13582	205	thrH phosphoserine phosphatase; Provisional	99.34
COG0647	269	NagD Predicted sugar phosphatases of the HAD super	99.32
PLN02954	224	phosphoserine phosphatase	99.32
TIGR01672	237	AphA HAD superfamily (subfamily IIIB) phosphatase,	99.32
PLN02645	311	phosphoglycolate phosphatase	99.31
TIGR01457	249	HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydr	99.28
COG0241	181	HisB Histidinol phosphatase and related phosphatas	99.27
TIGR01681	128	HAD-SF-IIIC HAD-superfamily phosphatase, subfamily	99.26
PRK11009	237	aphA acid phosphatase/phosphotransferase; Provisio	99.26
TIGR02137	203	HSK-PSP phosphoserine phosphatase/homoserine phosp	99.22
PRK11133	322	serB phosphoserine phosphatase; Provisional	99.21
TIGR02726	169	phenyl_P_delta phenylphosphate carboxylase, delta	99.21
PRK09484	183	3-deoxy-D-manno-octulosonate 8-phosphate phosphata	99.19
TIGR03333	214	salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl	99.19
TIGR01489	188	DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopent	99.18
COG2179	175	Predicted hydrolase of the HAD superfamily [Genera	99.11
TIGR01459	242	HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolas	99.08
PRK10444	248	UMP phosphatase; Provisional	99.0
PF00702	215	Hydrolase: haloacid dehalogenase-like hydrolase; I	98.99
TIGR01686	320	FkbH FkbH-like domain. The C-terminal portion of t	98.96
TIGR01544	277	HAD-SF-IE haloacid dehalogenase superfamily, subfa	98.95
TIGR01663	526	PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase	98.93
TIGR01490	202	HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrol	98.86
TIGR02244	343	HAD-IG-Ncltidse HAD superfamily (subfamily IG) hyd	98.86
TIGR01488	177	HAD-SF-IB Haloacid Dehalogenase superfamily, subfa	98.77
TIGR01456	321	CECR5 HAD-superfamily class IIA hydrolase, TIGR014	98.73
KOG2882	306	consensus p-Nitrophenyl phosphatase [Inorganic ion	98.67
TIGR01512	536	ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translo	98.64
TIGR02251	162	HIF-SF_euk Dullard-like phosphatase domain. This d	98.64
PTZ00445	219	p36-lilke protein; Provisional	98.63
TIGR01459	242	HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolas	98.61
KOG3040	262	consensus Predicted sugar phosphatase (HAD superfa	98.58
TIGR01525	556	ATPase-IB_hvy heavy metal translocating P-type ATP	98.53
TIGR01460	236	HAD-SF-IIA Haloacid Dehalogenase Superfamily Class	98.49
PRK08238	479	hypothetical protein; Validated	98.45
TIGR01511	562	ATPase-IB1_Cu copper-(or silver)-translocating P-t	98.42
PF12689	169	Acid_PPase: Acid Phosphatase; InterPro: IPR010036	98.41
COG4229	229	Predicted enolase-phosphatase [Energy production a	98.38
COG0560	212	SerB Phosphoserine phosphatase [Amino acid transpo	98.37
PF06888	234	Put_Phosphatase: Putative Phosphatase; InterPro: I	98.36
PF08645	159	PNK3P: Polynucleotide kinase 3 phosphatase; InterP	98.22
PF09419	168	PGP_phosphatase: Mitochondrial PGP phosphatase; In	98.2
PRK10671	834	copA copper exporting ATPase; Provisional	98.19
TIGR01522	884	ATPase-IIA2_Ca golgi membrane calcium-translocatin	98.19
COG1778	170	Low specificity phosphatase (HAD superfamily) [Gen	98.14
PRK10530	272	pyridoxal phosphate (PLP) phosphatase; Provisional	98.13
TIGR00685	244	T6PP trehalose-phosphatase. At least 18 distinct s	97.92
TIGR01533	266	lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) famil	97.87
PRK01158	230	phosphoglycolate phosphatase; Provisional	97.8
TIGR01482	225	SPP-subfamily Sucrose-phosphate phosphatase subfam	97.72
PF05761	448	5_nucleotid: 5' nucleotidase family; InterPro: IPR	97.58
KOG3120	256	consensus Predicted haloacid dehalogenase-like hyd	97.56
COG4087	152	Soluble P-type ATPase [General function prediction	97.55
PRK11033	741	zntA zinc/cadmium/mercury/lead-transporting ATPase	97.55
TIGR02250	156	FCP1_euk FCP1-like phosphatase, phosphatase domain	97.54
TIGR01487	215	SPP-like sucrose-phosphate phosphatase-like hydrol	97.47
TIGR01116	917	ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium	97.46
COG4359	220	Uncharacterized conserved protein [Function unknow	97.44
PF12710	192	HAD: haloacid dehalogenase-like hydrolase; PDB: 3P	97.39
TIGR01684	301	viral_ppase viral phosphatase. These proteins also	97.37
PLN02645	311	phosphoglycolate phosphatase	97.28
TIGR01485	249	SPP_plant-cyano sucrose-6F-phosphate phosphohydrol	97.21
KOG1615	227	consensus Phosphoserine phosphatase [Amino acid tr	97.21
TIGR02463	221	MPGP_rel mannosyl-3-phosphoglycerate phosphatase-r	97.17
PHA03398	303	viral phosphatase superfamily protein; Provisional	96.98
PRK00192	273	mannosyl-3-phosphoglycerate phosphatase; Reviewed	96.93
PF06941	191	NT5C: 5' nucleotidase, deoxy (Pyrimidine), cytosol	96.92
KOG2630	254	consensus Enolase-phosphatase E-1 [Amino acid tran	96.81
PRK10513	270	sugar phosphate phosphatase; Provisional	96.65
TIGR01497	675	kdpB K+-transporting ATPase, B subunit. One sequen	96.57
PRK10187	266	trehalose-6-phosphate phosphatase; Provisional	96.56
PRK11590	211	hypothetical protein; Provisional	96.52
PRK14010	673	potassium-transporting ATPase subunit B; Provision	96.5
TIGR02471	236	sucr_syn_bact_C sucrose phosphate synthase, sucros	96.41
COG2217	713	ZntA Cation transport ATPase [Inorganic ion transp	96.41
TIGR01484	204	HAD-SF-IIB HAD-superfamily hydrolase, subfamily II	96.38
PRK10976	266	putative hydrolase; Provisional	96.35
PF13344	101	Hydrolase_6: Haloacid dehalogenase-like hydrolase;	96.12
PRK15126	272	thiamin pyrimidine pyrophosphate hydrolase; Provis	96.07
PRK01122	679	potassium-transporting ATPase subunit B; Provision	95.96
TIGR01545	210	YfhB_g-proteo haloacid dehalogenase superfamily, s	95.92
PF03031	159	NIF: NLI interacting factor-like phosphatase; Inte	95.92
TIGR00099	256	Cof-subfamily Cof subfamily of IIB subfamily of ha	95.91
TIGR01647	755	ATPase-IIIA_H plasma-membrane proton-efflux P-type	95.8
PRK10517	902	magnesium-transporting ATPase MgtA; Provisional	95.75
PRK15122	903	magnesium-transporting ATPase; Provisional	95.7
COG5610	635	Predicted hydrolase (HAD superfamily) [General fun	95.7
TIGR01524	867	ATPase-IIIB_Mg magnesium-translocating P-type ATPa	95.67
KOG2470	510	consensus Similar to IMP-GMP specific 5'-nucleotid	95.66
TIGR01675	229	plant-AP plant acid phosphatase. This model explic	95.52
TIGR01517	941	ATPase-IIB_Ca plasma-membrane calcium-translocatin	95.38
PF08282	254	Hydrolase_3: haloacid dehalogenase-like hydrolase;	95.31
PLN02887	580	hydrolase family protein	95.24
TIGR01452	279	PGP_euk phosphoglycolate/pyridoxal phosphate phosp	95.22
COG4996	164	Predicted phosphatase [General function prediction	95.1
KOG2961	190	consensus Predicted hydrolase (HAD superfamily) [G	95.09
TIGR01523	1053	ATPase-IID_K-Na potassium and/or sodium efflux P-t	94.93
PRK14501	726	putative bifunctional trehalose-6-phosphate syntha	94.68
PRK03669	271	mannosyl-3-phosphoglycerate phosphatase; Reviewed	94.59
TIGR01658	274	EYA-cons_domain eyes absent protein conserved doma	94.07
PF11019	252	DUF2608: Protein of unknown function (DUF2608); In	94.02
TIGR01106	997	ATPase-IIC_X-K sodium or proton efflux -- potassiu	94.02
COG3700	237	AphA Acid phosphatase (class B) [General function	94.02
PLN02580	384	trehalose-phosphatase	93.81
COG0561	264	Cof Predicted hydrolases of the HAD superfamily [G	93.69
TIGR01486	256	HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosph	93.44
TIGR01680	275	Veg_Stor_Prot vegetative storage protein. The prot	92.59
COG2503	274	Predicted secreted acid phosphatase [General funct	92.52
KOG0207	951	consensus Cation transport ATPase [Inorganic ion t	92.5
PLN02205	854	alpha,alpha-trehalose-phosphate synthase [UDP-form	92.18
KOG3107	468	consensus Predicted haloacid dehalogenase-like hyd	92.06
TIGR02461	225	osmo_MPG_phos mannosyl-3-phosphoglycerate phosphat	91.62
PLN02382	413	probable sucrose-phosphatase	91.16
PF05152	297	DUF705: Protein of unknown function (DUF705); Inte	90.94
PF05116	247	S6PP: Sucrose-6F-phosphate phosphohydrolase; Inter	90.94
COG0474	917	MgtA Cation transport ATPase [Inorganic ion transp	90.27
TIGR01494	499	ATPase_P-type ATPase, P-type (transporting), HAD s	90.22
COG5663	194	Uncharacterized conserved protein [Function unknow	89.88
TIGR01657	1054	P-ATPase-V P-type ATPase of unknown pump specifici	89.74
PF03767	229	Acid_phosphat_B: HAD superfamily, subfamily IIIB (	88.91
TIGR02245	195	HAD_IIID1 HAD-superfamily subfamily IIID hydrolase	88.71
TIGR01652	1057	ATPase-Plipid phospholipid-translocating P-type AT	87.53
smart00775	157	LNS2 LNS2 domain. This domain is found in Saccharo	87.29
PLN03017	366	trehalose-phosphatase	86.21
PLN02151	354	trehalose-phosphatase	85.17
KOG0202	972	consensus Ca2+ transporting ATPase [Inorganic ion	85.01
KOG2469	424	consensus IMP-GMP specific 5'-nucleotidase [Nucleo	82.69
COG4030	315	Uncharacterized protein conserved in archaea [Func	81.81
PRK10444	248	UMP phosphatase; Provisional	81.76
TIGR01458	257	HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydr	81.15
KOG1618	389	consensus Predicted phosphatase [General function	80.78
PF05822	246	UMPH-1: Pyrimidine 5'-nucleotidase (UMPH-1); Inter	80.62

>KOG3109 consensus Haloacid dehalogenase-like hydrolase [General function prediction only]

Probab=99.97  E-value=2.2e-30  Score=217.21  Aligned_cols=189  Identities=58%  Similarity=0.968  Sum_probs=176.1

Q ss_pred             CcccCCCCcccHHHHHHHHHHHhCccHHHHHHccCCCCHHHHHHHHhccCCCCCCCCChhHHHHHhcCCCC-eEEEeCCC
Q 027403            1 MSQHLHIDESEVPRMCLELYREHGTTMAGLKAVGYEFDNDEFHAFVHGKLPYEKLKPDPVLRNLLLSMPQR-KIIFTNAD   79 (224)
Q Consensus         1 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~L~~l~~~-~~I~Tn~~   79 (224)
                      |.+++|++.+++.++++.+|+.||+++.|++..|+.++.++|++.++++++++.++|.+.++++|..|+.+ .+++||+.
T Consensus        45 ~~eklgi~~e~a~~L~~~~yk~YG~t~aGL~~~~~~~d~deY~~~V~~~LPlq~LkPD~~LRnlLL~l~~r~k~~FTNa~  124 (244)
T KOG3109|consen   45 FVEKLGISEEEAEELRESLYKEYGLTMAGLKAVGYIFDADEYHRFVHGRLPLQDLKPDPVLRNLLLSLKKRRKWIFTNAY  124 (244)
T ss_pred             HHHHhCCChhhhHHHHHHHHHHHhHHHHHHHHhcccCCHHHHHHHhhccCcHhhcCCCHHHHHHHHhCccccEEEecCCc
Confidence            34689999999999999999999999999999999999999999999999999999999999999999977 99999999


Q ss_pred             hHHHHHHHHHcCCccccceeEeeccCCCCCCCCCCCCCcccccCCccccccCCCCHHHHHHHHHHhCCC-CCcEEEEeCC
Q 027403           80 QKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCKPSLEAIETAIRIANVD-PKKTIFFDDS  158 (224)
Q Consensus        80 ~~~~~~~l~~lgl~~~fd~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~~~~~~~al~~~~~~-~~~~l~VgDs  158 (224)
                      +.|+.+.|+.+|+.++|++|+|++...+.                 +--.-|||.+.+|+.+.+.+|++ |.+++|++||
T Consensus       125 k~HA~r~Lk~LGieDcFegii~~e~~np~-----------------~~~~vcKP~~~afE~a~k~agi~~p~~t~FfDDS  187 (244)
T KOG3109|consen  125 KVHAIRILKKLGIEDCFEGIICFETLNPI-----------------EKTVVCKPSEEAFEKAMKVAGIDSPRNTYFFDDS  187 (244)
T ss_pred             HHHHHHHHHHhChHHhccceeEeeccCCC-----------------CCceeecCCHHHHHHHHHHhCCCCcCceEEEcCc
Confidence            99999999999999999999999987641                 11123799999999999999997 9999999999


Q ss_pred             hhcHHHHHHcCCeEEEECCCCCCCCCceEeCCHhHHHHHHHHHHhhcC
Q 027403          159 ARNIASAKAAGLHTVIVGSSVPVPPADHALNSIHNIKEAIPEIWEGEG  206 (224)
Q Consensus       159 ~~Di~~A~~~G~~~v~v~~~~~~~~~d~~i~~~~dl~~~i~~~~~~~~  206 (224)
                      .++|++|++.||+++++.......++++++.+..+.++.++++|+...
T Consensus       188 ~~NI~~ak~vGl~tvlv~~~~~~~~~d~~l~~ih~~k~a~p~l~~~~~  235 (244)
T KOG3109|consen  188 ERNIQTAKEVGLKTVLVGREHKIKGVDYALEQIHNNKEALPELWEILE  235 (244)
T ss_pred             hhhHHHHHhccceeEEEEeeecccchHHHHHHhhchhhhchHHhhccc
Confidence            999999999999999999988889999999999999999999999843

>TIGR01993 Pyr-5-nucltdase pyrimidine 5'-nucleotidase

Probab=99.89  E-value=3.2e-22  Score=164.47  Aligned_cols=153  Identities=59%  Similarity=0.977  Sum_probs=130.8

Q ss_pred             ccCCCCcccHHHHHHHHHHHhCccHHHHHHccCCCCHHHHHHHHhccCCCCCCCCChhHHHHHhcCCCCeEEEeCCChHH
Q 027403            3 QHLHIDESEVPRMCLELYREHGTTMAGLKAVGYEFDNDEFHAFVHGKLPYEKLKPDPVLRNLLLSMPQRKIIFTNADQKH   82 (224)
Q Consensus         3 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~L~~l~~~~~I~Tn~~~~~   82 (224)
                      +++|++..++..+..+++..+|.++.++... ...+.+++...++.......++++||+.++|+.|+++++|+||++...
T Consensus        32 ~~~g~~~~~~~~l~~~~~~~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~L~~L~~~~~i~Tn~~~~~  110 (184)
T TIGR01993        32 ARLKLSEEEARVLRKDYYREYGTTLAGLMIL-HEIDADEYLRYVHGRLPYEKLKPDPELRNLLLRLPGRKIIFTNGDRAH  110 (184)
T ss_pred             HHcCcCHHHHHHHHHHHHHHHchHHHHHHHh-hCCCHHHHHHHHhccCCHHhCCCCHHHHHHHHhCCCCEEEEeCCCHHH
Confidence            3678887777777778888888887776653 456778888887765555567899999999999999999999999999


Q ss_pred             HHHHHHHcCCccccceeEeeccCCCCCCCCCCCCCcccccCCccccccCCCCHHHHHHHHHHhCCCCCcEEEEeCChhcH
Q 027403           83 AMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNI  162 (224)
Q Consensus        83 ~~~~l~~lgl~~~fd~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~~~~~~~al~~~~~~~~~~l~VgDs~~Di  162 (224)
                      +...++++|+.++||.++++++.+.+                   ...+||+|++|..+++++|++|++++||||+..|+
T Consensus       111 ~~~~l~~~gl~~~fd~i~~~~~~~~~-------------------~~~~KP~p~~~~~~~~~~~~~~~~~l~vgD~~~di  171 (184)
T TIGR01993       111 ARRALNRLGIEDCFDGIFCFDTANPD-------------------YLLPKPSPQAYEKALREAGVDPERAIFFDDSARNI  171 (184)
T ss_pred             HHHHHHHcCcHhhhCeEEEeecccCc-------------------cCCCCCCHHHHHHHHHHhCCCccceEEEeCCHHHH
Confidence            99999999999999999999887641                   01139999999999999999999999999999999


Q ss_pred             HHHHHcCCeEEEE
Q 027403          163 ASAKAAGLHTVIV  175 (224)
Q Consensus       163 ~~A~~~G~~~v~v  175 (224)
                      ++|+++|+++++|
T Consensus       172 ~aA~~~G~~~i~v  184 (184)
T TIGR01993       172 AAAKALGMKTVLV  184 (184)
T ss_pred             HHHHHcCCEEeeC
Confidence            9999999999875

These enzymes are members of the haloacid dehalogenase (HAD) superfamily of hydrolases, specifically the IA subfamily (variant 3, TIGR01509).

>TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase

Probab=99.86  E-value=3e-21  Score=166.47  Aligned_cols=123  Identities=14%  Similarity=0.083  Sum_probs=111.2

Q ss_pred             CCCCCChhHHHHHhcCC---CCeEEEeCCChHHHHHHHHHcCCcccc-ceeEeeccCCCCCCCCCCCCCcccccCCcccc
Q 027403           53 EKLKPDPVLRNLLLSMP---QRKIIFTNADQKHAMEVLGRLGLEDCF-EGIICFETINPRLQPADNTDGIENNSFSSNQR  128 (224)
Q Consensus        53 ~~~~~~~g~~~~L~~l~---~~~~I~Tn~~~~~~~~~l~~lgl~~~f-d~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~  128 (224)
                      +...++||+.++|+.|+   ++++|+||++...+...++++|+.++| +.|++++++...                    
T Consensus        96 ~~~~~~pg~~e~L~~L~~~g~~l~IvT~~~~~~~~~~l~~~gl~~~f~d~ii~~~~~~~~--------------------  155 (253)
T TIGR01422        96 EYSSPIPGVIEVIAYLRARGIKIGSTTGYTREMMDVVAPEAALQGYRPDYNVTTDDVPAG--------------------  155 (253)
T ss_pred             hcCccCCCHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHHHHhcCCCCceEEccccCCCC--------------------
Confidence            45789999999999996   678899999999999999999999986 889999988764                    


Q ss_pred             ccCCCCHHHHHHHHHHhCCC-CCcEEEEeCChhcHHHHHHcCCeEEEECCCCC---------------------------
Q 027403          129 ILCKPSLEAIETAIRIANVD-PKKTIFFDDSARNIASAKAAGLHTVIVGSSVP---------------------------  180 (224)
Q Consensus       129 ~~~KP~~~~~~~al~~~~~~-~~~~l~VgDs~~Di~~A~~~G~~~v~v~~~~~---------------------------  180 (224)
                         ||+|++|..+++++++. |++|++||||.+|+++|+++|+.+|+|.+|..                           
T Consensus       156 ---KP~p~~~~~a~~~l~~~~~~~~l~IGDs~~Di~aA~~aGi~~i~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  232 (253)
T TIGR01422       156 ---RPAPWMALKNAIELGVYDVAACVKVGDTVPDIEEGRNAGMWTVGLILSSNELGLSEEEYRALDPAELEARRAEATAR  232 (253)
T ss_pred             ---CCCHHHHHHHHHHcCCCCchheEEECCcHHHHHHHHHCCCeEEEEecCCcccCCCHHHHHhCCHHHHHHHHHHHHHH
Confidence               99999999999999995 99999999999999999999999999998853                           


Q ss_pred             --CCCCceEeCCHhHHHHHH
Q 027403          181 --VPPADHALNSIHNIKEAI  198 (224)
Q Consensus       181 --~~~~d~~i~~~~dl~~~i  198 (224)
                        ..+++++++++.+|.+++
T Consensus       233 l~~~~~~~v~~~~~el~~~~  252 (253)
T TIGR01422       233 LKAAGAHYVIDTLAELPAVI  252 (253)
T ss_pred             HHhcCCCEehhcHHHHHHhh
Confidence              246899999999988764

This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent.

>PRK13288 pyrophosphatase PpaX; Provisional

Probab=99.86  E-value=5.2e-21  Score=160.80  Aligned_cols=124  Identities=19%  Similarity=0.286  Sum_probs=113.4

Q ss_pred             CCCCCChhHHHHHhcCC---CCeEEEeCCChHHHHHHHHHcCCccccceeEeeccCCCCCCCCCCCCCcccccCCccccc
Q 027403           53 EKLKPDPVLRNLLLSMP---QRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRI  129 (224)
Q Consensus        53 ~~~~~~~g~~~~L~~l~---~~~~I~Tn~~~~~~~~~l~~lgl~~~fd~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  129 (224)
                      ....++||+.++|+.|+   .+++|+||++...+...++.+|+.++|+.+++++++...                     
T Consensus        79 ~~~~~~~g~~~~l~~L~~~g~~~~i~S~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~---------------------  137 (214)
T PRK13288         79 ELVTEYETVYETLKTLKKQGYKLGIVTTKMRDTVEMGLKLTGLDEFFDVVITLDDVEHA---------------------  137 (214)
T ss_pred             hhcccCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCChhceeEEEecCcCCCC---------------------
Confidence            35789999999999996   678899999999999999999999999999999988764                     


Q ss_pred             cCCCCHHHHHHHHHHhCCCCCcEEEEeCChhcHHHHHHcCCeEEEECCCCC------CCCCceEeCCHhHHHHHHH
Q 027403          130 LCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP------VPPADHALNSIHNIKEAIP  199 (224)
Q Consensus       130 ~~KP~~~~~~~al~~~~~~~~~~l~VgDs~~Di~~A~~~G~~~v~v~~~~~------~~~~d~~i~~~~dl~~~i~  199 (224)
                        ||+|.+|..++++++++|+++++|||+.+|+++|+++|++++++.++..      ..+++++++++.++.+++.
T Consensus       138 --Kp~p~~~~~~~~~~~~~~~~~~~iGDs~~Di~aa~~aG~~~i~v~~g~~~~~~l~~~~~~~~i~~~~~l~~~i~  211 (214)
T PRK13288        138 --KPDPEPVLKALELLGAKPEEALMVGDNHHDILAGKNAGTKTAGVAWTIKGREYLEQYKPDFMLDKMSDLLAIVG  211 (214)
T ss_pred             --CCCcHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHCCCeEEEEcCCCCCHHHHhhcCcCEEECCHHHHHHHHh
Confidence              9999999999999999999999999999999999999999999998853      3468999999999988764

>PLN03243 haloacid dehalogenase-like hydrolase; Provisional

Probab=99.85  E-value=1.8e-20  Score=163.64  Aligned_cols=143  Identities=15%  Similarity=0.221  Sum_probs=122.9

Q ss_pred             CCCCCChhHHHHHhcCC---CCeEEEeCCChHHHHHHHHHcCCccccceeEeeccCCCCCCCCCCCCCcccccCCccccc
Q 027403           53 EKLKPDPVLRNLLLSMP---QRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRI  129 (224)
Q Consensus        53 ~~~~~~~g~~~~L~~l~---~~~~I~Tn~~~~~~~~~l~~lgl~~~fd~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  129 (224)
                      ....++||+.++|+.|+   ++++|+||++...+...++++|+.++|+.+++++++...                     
T Consensus       106 ~~~~l~pg~~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~~~Fd~ii~~~d~~~~---------------------  164 (260)
T PLN03243        106 GLYRLRPGSREFVQALKKHEIPIAVASTRPRRYLERAIEAVGMEGFFSVVLAAEDVYRG---------------------  164 (260)
T ss_pred             cCcccCCCHHHHHHHHHHCCCEEEEEeCcCHHHHHHHHHHcCCHhhCcEEEecccCCCC---------------------
Confidence            35788999999999997   688899999999999999999999999999999998764                     


Q ss_pred             cCCCCHHHHHHHHHHhCCCCCcEEEEeCChhcHHHHHHcCCeEEEECCCCC---CCCCceEeCCHhHHHHHHHHHHhhcC
Q 027403          130 LCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP---VPPADHALNSIHNIKEAIPEIWEGEG  206 (224)
Q Consensus       130 ~~KP~~~~~~~al~~~~~~~~~~l~VgDs~~Di~~A~~~G~~~v~v~~~~~---~~~~d~~i~~~~dl~~~i~~~~~~~~  206 (224)
                        ||+|++|..+++++|++|++|+|||||..|+++|+++|+++|++.....   ...++++++++.+|......-++.-+
T Consensus       165 --KP~Pe~~~~a~~~l~~~p~~~l~IgDs~~Di~aA~~aG~~~i~v~g~~~~~~l~~ad~vi~~~~el~~~~~~~~~~~~  242 (260)
T PLN03243        165 --KPDPEMFMYAAERLGFIPERCIVFGNSNSSVEAAHDGCMKCVAVAGKHPVYELSAGDLVVRRLDDLSVVDLKNLSDLD  242 (260)
T ss_pred             --CCCHHHHHHHHHHhCCChHHeEEEcCCHHHHHHHHHcCCEEEEEecCCchhhhccCCEEeCCHHHHHHHHHhhhhccC
Confidence              9999999999999999999999999999999999999999999963221   33589999999999988887777644


Q ss_pred             cchhhhhchhhHh
Q 027403          207 EQLEQVIQPAAVE  219 (224)
Q Consensus       207 ~~~~~~~~~~~~~  219 (224)
                      . -|-+|-....|
T Consensus       243 ~-~~~~~~~~~~~  254 (260)
T PLN03243        243 S-PEFQIPEPQLE  254 (260)
T ss_pred             C-ccccCcchHHH
Confidence            4 45555444443

>TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic

Probab=99.85  E-value=2.2e-20  Score=156.02  Aligned_cols=121  Identities=24%  Similarity=0.309  Sum_probs=110.9

Q ss_pred             CCCCChhHHHHHhcCC---CCeEEEeCCChHHHHHHHHHcCCccccceeEeeccCCCCCCCCCCCCCcccccCCcccccc
Q 027403           54 KLKPDPVLRNLLLSMP---QRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRIL  130 (224)
Q Consensus        54 ~~~~~~g~~~~L~~l~---~~~~I~Tn~~~~~~~~~l~~lgl~~~fd~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  130 (224)
                      ...++||+.++|+.|+   ++++|+||++...+...++++|+.++|+.++++++....                      
T Consensus        83 ~~~~~~g~~~~L~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~----------------------  140 (213)
T TIGR01449        83 LTSVFPGVEATLGALRAKGLRLGLVTNKPTPLARPLLELLGLAKYFSVLIGGDSLAQR----------------------  140 (213)
T ss_pred             cCccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCcHhhCcEEEecCCCCCC----------------------
Confidence            4789999999999996   678999999999999999999999999999999887764                      


Q ss_pred             CCCCHHHHHHHHHHhCCCCCcEEEEeCChhcHHHHHHcCCeEEEECCCCC------CCCCceEeCCHhHHHHH
Q 027403          131 CKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP------VPPADHALNSIHNIKEA  197 (224)
Q Consensus       131 ~KP~~~~~~~al~~~~~~~~~~l~VgDs~~Di~~A~~~G~~~v~v~~~~~------~~~~d~~i~~~~dl~~~  197 (224)
                       ||+|++|..++++++++|++|++|||+.+|+.+|+++|++++++.+|..      ..+++++++++.+|..+
T Consensus       141 -Kp~p~~~~~~~~~~~~~~~~~~~igDs~~d~~aa~~aG~~~i~v~~g~~~~~~l~~~~a~~~i~~~~~l~~~  212 (213)
T TIGR01449       141 -KPHPDPLLLAAERLGVAPQQMVYVGDSRVDIQAARAAGCPSVLLTYGYRYGEAIDLLPPDVLYDSLNELPPL  212 (213)
T ss_pred             -CCChHHHHHHHHHcCCChhHeEEeCCCHHHHHHHHHCCCeEEEEccCCCCCcchhhcCCCeEeCCHHHHHhh
Confidence             9999999999999999999999999999999999999999999988753      34689999999998764

This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702).

>PRK10563 6-phosphogluconate phosphatase; Provisional

Probab=99.85  E-value=8.1e-21  Score=160.22  Aligned_cols=142  Identities=20%  Similarity=0.250  Sum_probs=113.8

Q ss_pred             ccCCCCHHHHHHHHhccCC---CCCCCCChhHHHHHhcCCCCeEEEeCCChHHHHHHHHHcCCccccc-eeEeeccCCCC
Q 027403           33 VGYEFDNDEFHAFVHGKLP---YEKLKPDPVLRNLLLSMPQRKIIFTNADQKHAMEVLGRLGLEDCFE-GIICFETINPR  108 (224)
Q Consensus        33 ~~~~~~~~~~~~~~~~~~~---~~~~~~~~g~~~~L~~l~~~~~I~Tn~~~~~~~~~l~~lgl~~~fd-~ii~~~~~~~~  108 (224)
                      ++...+.+++...+...+.   ...+.++||+.++|+.|+++++|+||++...+...++++|+.++|+ .++++++++..
T Consensus        62 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~L~~L~~~~~ivTn~~~~~~~~~l~~~~l~~~F~~~v~~~~~~~~~  141 (221)
T PRK10563         62 HGVTLAKAELEPVYRAEVARLFDSELEPIAGANALLESITVPMCVVSNGPVSKMQHSLGKTGMLHYFPDKLFSGYDIQRW  141 (221)
T ss_pred             hCCCCCHHHHHHHHHHHHHHHHHccCCcCCCHHHHHHHcCCCEEEEeCCcHHHHHHHHHhcChHHhCcceEeeHHhcCCC
Confidence            3555555666554432211   2457899999999999999999999999999999999999999996 57777777764


Q ss_pred             CCCCCCCCCcccccCCccccccCCCCHHHHHHHHHHhCCCCCcEEEEeCChhcHHHHHHcCCeEEEECCCCC----CCCC
Q 027403          109 LQPADNTDGIENNSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP----VPPA  184 (224)
Q Consensus       109 ~~~~~~~~~~~~~~~~~~~~~~~KP~~~~~~~al~~~~~~~~~~l~VgDs~~Di~~A~~~G~~~v~v~~~~~----~~~~  184 (224)
                                             ||+|++|..++++++++|++|+||||+..||++|+++|++++++..+..    ..++
T Consensus       142 -----------------------KP~p~~~~~a~~~~~~~p~~~l~igDs~~di~aA~~aG~~~i~~~~~~~~~~~~~~~  198 (221)
T PRK10563        142 -----------------------KPDPALMFHAAEAMNVNVENCILVDDSSAGAQSGIAAGMEVFYFCADPHNKPIDHPL  198 (221)
T ss_pred             -----------------------CCChHHHHHHHHHcCCCHHHeEEEeCcHhhHHHHHHCCCEEEEECCCCCCcchhhhh
Confidence                                   9999999999999999999999999999999999999999999965432    1233


Q ss_pred             ceEeCCHhHHHHH
Q 027403          185 DHALNSIHNIKEA  197 (224)
Q Consensus       185 d~~i~~~~dl~~~  197 (224)
                      +.+++++.+|.++
T Consensus       199 ~~~~~~~~~l~~~  211 (221)
T PRK10563        199 VTTFTDLAQLPEL  211 (221)
T ss_pred             hHHHHHHHHHHHH
Confidence            4556677666654

>COG0546 Gph Predicted phosphatases [General function prediction only]

Probab=99.85  E-value=1.8e-20  Score=159.25  Aligned_cols=122  Identities=26%  Similarity=0.357  Sum_probs=111.9

Q ss_pred             CCCChhHHHHHhcCC---CCeEEEeCCChHHHHHHHHHcCCccccceeEeeccCCCCCCCCCCCCCcccccCCccccccC
Q 027403           55 LKPDPVLRNLLLSMP---QRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILC  131 (224)
Q Consensus        55 ~~~~~g~~~~L~~l~---~~~~I~Tn~~~~~~~~~l~~lgl~~~fd~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  131 (224)
                      ..++||+.++|+.|+   ++++|+||+++..+...++++|+.++|+.+++.++....                       
T Consensus        88 ~~~~~gv~e~L~~L~~~g~~l~i~T~k~~~~~~~~l~~~gl~~~F~~i~g~~~~~~~-----------------------  144 (220)
T COG0546          88 SRLFPGVKELLAALKSAGYKLGIVTNKPERELDILLKALGLADYFDVIVGGDDVPPP-----------------------  144 (220)
T ss_pred             CccCCCHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHhCCccccceEEcCCCCCCC-----------------------
Confidence            579999999999997   678999999999999999999999999999996666654                       


Q ss_pred             CCCHHHHHHHHHHhCCCCCcEEEEeCChhcHHHHHHcCCeEEEECCCCC------CCCCceEeCCHhHHHHHHH
Q 027403          132 KPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP------VPPADHALNSIHNIKEAIP  199 (224)
Q Consensus       132 KP~~~~~~~al~~~~~~~~~~l~VgDs~~Di~~A~~~G~~~v~v~~~~~------~~~~d~~i~~~~dl~~~i~  199 (224)
                      ||+|..+..++++++++|++++||||+.+|+.+|+++|+++++|.||..      ..++|++++++.||...+.
T Consensus       145 KP~P~~l~~~~~~~~~~~~~~l~VGDs~~Di~aA~~Ag~~~v~v~~g~~~~~~l~~~~~d~vi~~~~el~~~l~  218 (220)
T COG0546         145 KPDPEPLLLLLEKLGLDPEEALMVGDSLNDILAAKAAGVPAVGVTWGYNSREELAQAGADVVIDSLAELLALLA  218 (220)
T ss_pred             CcCHHHHHHHHHHhCCChhheEEECCCHHHHHHHHHcCCCEEEEECCCCCCcchhhcCCCEEECCHHHHHHHHh
Confidence            9999999999999999988999999999999999999999999999862      4559999999999998765

>PLN02770 haloacid dehalogenase-like hydrolase family protein

Probab=99.85  E-value=1.3e-20  Score=162.81  Aligned_cols=120  Identities=26%  Similarity=0.340  Sum_probs=110.3

Q ss_pred             CCCCCChhHHHHHhcCC---CCeEEEeCCChHHHHHHHHHcCCccccceeEeeccCCCCCCCCCCCCCcccccCCccccc
Q 027403           53 EKLKPDPVLRNLLLSMP---QRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRI  129 (224)
Q Consensus        53 ~~~~~~~g~~~~L~~l~---~~~~I~Tn~~~~~~~~~l~~lgl~~~fd~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  129 (224)
                      ..+.++||+.++|+.|+   ++++|+||+++..+...++++|+.++|+.+++++++...                     
T Consensus       105 ~~~~l~pgv~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~~~Fd~iv~~~~~~~~---------------------  163 (248)
T PLN02770        105 EQLKPLNGLYKLKKWIEDRGLKRAAVTNAPRENAELMISLLGLSDFFQAVIIGSECEHA---------------------  163 (248)
T ss_pred             hcCCcCccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCChhhCcEEEecCcCCCC---------------------
Confidence            45789999999999996   689999999999999999999999999999999998764                     


Q ss_pred             cCCCCHHHHHHHHHHhCCCCCcEEEEeCChhcHHHHHHcCCeEEEECCCCC-----CCCCceEeCCHhHHH
Q 027403          130 LCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP-----VPPADHALNSIHNIK  195 (224)
Q Consensus       130 ~~KP~~~~~~~al~~~~~~~~~~l~VgDs~~Di~~A~~~G~~~v~v~~~~~-----~~~~d~~i~~~~dl~  195 (224)
                        ||+|++|..++++++++|++|+||||+..|+++|+++|++++++.++..     ..+++++++++.++.
T Consensus       164 --KP~p~~~~~a~~~~~~~~~~~l~vgDs~~Di~aA~~aGi~~i~v~~g~~~~~l~~~~a~~vi~~~~e~~  232 (248)
T PLN02770        164 --KPHPDPYLKALEVLKVSKDHTFVFEDSVSGIKAGVAAGMPVVGLTTRNPESLLMEAKPTFLIKDYEDPK  232 (248)
T ss_pred             --CCChHHHHHHHHHhCCChhHEEEEcCCHHHHHHHHHCCCEEEEEeCCCCHHHHhhcCCCEEeccchhhH
Confidence              9999999999999999999999999999999999999999999988753     346899999999943

>TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein

Probab=99.85  E-value=4.2e-20  Score=154.31  Aligned_cols=124  Identities=23%  Similarity=0.313  Sum_probs=113.4

Q ss_pred             CCCCCChhHHHHHhcCC---CCeEEEeCCChHHHHHHHHHcCCccccceeEeeccCCCCCCCCCCCCCcccccCCccccc
Q 027403           53 EKLKPDPVLRNLLLSMP---QRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRI  129 (224)
Q Consensus        53 ~~~~~~~g~~~~L~~l~---~~~~I~Tn~~~~~~~~~l~~lgl~~~fd~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  129 (224)
                      +.+.++||+.++|+.|+   ++++|+||++...+...++++|+.++|+.++++++....                     
T Consensus        72 ~~~~~~~g~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~---------------------  130 (205)
T TIGR01454        72 GEVEVFPGVPELLAELRADGVGTAIATGKSGPRARSLLEALGLLPLFDHVIGSDEVPRP---------------------  130 (205)
T ss_pred             cccccCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHcCChhheeeEEecCcCCCC---------------------
Confidence            45889999999999996   678999999999999999999999999999999887653                     


Q ss_pred             cCCCCHHHHHHHHHHhCCCCCcEEEEeCChhcHHHHHHcCCeEEEECCCCC------CCCCceEeCCHhHHHHHHH
Q 027403          130 LCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP------VPPADHALNSIHNIKEAIP  199 (224)
Q Consensus       130 ~~KP~~~~~~~al~~~~~~~~~~l~VgDs~~Di~~A~~~G~~~v~v~~~~~------~~~~d~~i~~~~dl~~~i~  199 (224)
                        ||+|.+|..++++++++|++|+||||+.+|+.+|+++|++++++.||..      ..+++++++++.+|..+++
T Consensus       131 --KP~~~~~~~~~~~~~~~~~~~l~igD~~~Di~aA~~~Gi~~i~~~~g~~~~~~l~~~~~~~~~~~~~~l~~~~~  204 (205)
T TIGR01454       131 --KPAPDIVREALRLLDVPPEDAVMVGDAVTDLASARAAGTATVAALWGEGDAGELLAARPDFLLRKPQSLLALCR  204 (205)
T ss_pred             --CCChHHHHHHHHHcCCChhheEEEcCCHHHHHHHHHcCCeEEEEEecCCChhhhhhcCCCeeeCCHHHHHHHhh
Confidence              9999999999999999999999999999999999999999999998864      3458999999999988764

The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity.

>PRK09449 dUMP phosphatase; Provisional

Probab=99.85  E-value=2.9e-20  Score=156.99  Aligned_cols=122  Identities=19%  Similarity=0.246  Sum_probs=108.9

Q ss_pred             CCCCChhHHHHHhcCC--CCeEEEeCCChHHHHHHHHHcCCccccceeEeeccCCCCCCCCCCCCCcccccCCccccccC
Q 027403           54 KLKPDPVLRNLLLSMP--QRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILC  131 (224)
Q Consensus        54 ~~~~~~g~~~~L~~l~--~~~~I~Tn~~~~~~~~~l~~lgl~~~fd~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  131 (224)
                      .+.++||+.++|+.|+  ++++|+||++...+...++++|+.++||.++++++.+..                       
T Consensus        93 ~~~~~~g~~~~L~~L~~~~~~~i~Tn~~~~~~~~~l~~~~l~~~fd~v~~~~~~~~~-----------------------  149 (224)
T PRK09449         93 ICTPLPGAVELLNALRGKVKMGIITNGFTELQQVRLERTGLRDYFDLLVISEQVGVA-----------------------  149 (224)
T ss_pred             cCccCccHHHHHHHHHhCCeEEEEeCCcHHHHHHHHHhCChHHHcCEEEEECccCCC-----------------------
Confidence            4679999999999997  788899999999999999999999999999999998775                       


Q ss_pred             CCCHHHHHHHHHHhCCC-CCcEEEEeCCh-hcHHHHHHcCCeEEEECCCCC----CCCCceEeCCHhHHHHHH
Q 027403          132 KPSLEAIETAIRIANVD-PKKTIFFDDSA-RNIASAKAAGLHTVIVGSSVP----VPPADHALNSIHNIKEAI  198 (224)
Q Consensus       132 KP~~~~~~~al~~~~~~-~~~~l~VgDs~-~Di~~A~~~G~~~v~v~~~~~----~~~~d~~i~~~~dl~~~i  198 (224)
                      ||+|++|..+++++|+. +++|+||||+. +|+++|+++|++++++.++..    ...++++++++.+|.+++
T Consensus       150 KP~p~~~~~~~~~~~~~~~~~~~~vgD~~~~Di~~A~~aG~~~i~~~~~~~~~~~~~~~~~~i~~~~el~~~l  222 (224)
T PRK09449        150 KPDVAIFDYALEQMGNPDRSRVLMVGDNLHSDILGGINAGIDTCWLNAHGREQPEGIAPTYQVSSLSELEQLL  222 (224)
T ss_pred             CCCHHHHHHHHHHcCCCCcccEEEEcCCcHHHHHHHHHCCCcEEEECCCCCCCCCCCCCeEEECCHHHHHHHH
Confidence            99999999999999985 47999999998 699999999999999985422    235799999999998765

>TIGR03351 PhnX-like phosphonatase-like hydrolase

Probab=99.84  E-value=3.2e-20  Score=156.32  Aligned_cols=123  Identities=19%  Similarity=0.295  Sum_probs=110.9

Q ss_pred             CCCCCChhHHHHHhcCC---CCeEEEeCCChHHHHHHHHHcCCc--cccceeEeeccCCCCCCCCCCCCCcccccCCccc
Q 027403           53 EKLKPDPVLRNLLLSMP---QRKIIFTNADQKHAMEVLGRLGLE--DCFEGIICFETINPRLQPADNTDGIENNSFSSNQ  127 (224)
Q Consensus        53 ~~~~~~~g~~~~L~~l~---~~~~I~Tn~~~~~~~~~l~~lgl~--~~fd~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~  127 (224)
                      ....++||+.++|+.|+   ++++|+||++...+...++++|+.  ++|+.++++++....                   
T Consensus        84 ~~~~l~~G~~~~L~~L~~~g~~~~ivT~~~~~~~~~~l~~~~l~~~~~f~~i~~~~~~~~~-------------------  144 (220)
T TIGR03351        84 GPPVALPGAEEAFRSLRSSGIKVALTTGFDRDTAERLLEKLGWTVGDDVDAVVCPSDVAAG-------------------  144 (220)
T ss_pred             cCCccCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHhhhhhhccCCEEEcCCcCCCC-------------------
Confidence            34689999999999996   678999999999999999999998  999999999988764                   


Q ss_pred             cccCCCCHHHHHHHHHHhCCC-CCcEEEEeCChhcHHHHHHcCCeE-EEECCCCC------CCCCceEeCCHhHHHHHH
Q 027403          128 RILCKPSLEAIETAIRIANVD-PKKTIFFDDSARNIASAKAAGLHT-VIVGSSVP------VPPADHALNSIHNIKEAI  198 (224)
Q Consensus       128 ~~~~KP~~~~~~~al~~~~~~-~~~~l~VgDs~~Di~~A~~~G~~~-v~v~~~~~------~~~~d~~i~~~~dl~~~i  198 (224)
                          ||+|++|..+++++++. |++|+||||+..|+++|+++|+.+ +++.++..      ..+++++++++.+|.+++
T Consensus       145 ----KP~p~~~~~a~~~~~~~~~~~~~~igD~~~Di~aa~~aG~~~~i~~~~g~~~~~~~~~~~~~~~i~~~~~l~~~~  219 (220)
T TIGR03351       145 ----RPAPDLILRAMELTGVQDVQSVAVAGDTPNDLEAGINAGAGAVVGVLTGAHDAEELSRHPHTHVLDSVADLPALL  219 (220)
T ss_pred             ----CCCHHHHHHHHHHcCCCChhHeEEeCCCHHHHHHHHHCCCCeEEEEecCCCcHHHHhhcCCceeecCHHHHHHhh
Confidence                99999999999999997 799999999999999999999999 89987643      356899999999987754

This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the

>PRK13478 phosphonoacetaldehyde hydrolase; Provisional

Probab=99.84  E-value=3.8e-20  Score=161.19  Aligned_cols=125  Identities=14%  Similarity=0.100  Sum_probs=111.9

Q ss_pred             CCCCCChhHHHHHhcCC---CCeEEEeCCChHHHHHHHHHcCCcccc-ceeEeeccCCCCCCCCCCCCCcccccCCcccc
Q 027403           53 EKLKPDPVLRNLLLSMP---QRKIIFTNADQKHAMEVLGRLGLEDCF-EGIICFETINPRLQPADNTDGIENNSFSSNQR  128 (224)
Q Consensus        53 ~~~~~~~g~~~~L~~l~---~~~~I~Tn~~~~~~~~~l~~lgl~~~f-d~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~  128 (224)
                      +...++||+.++|+.|+   ++++|+||++...+...++.+|+.++| +.|++++++...                    
T Consensus        98 ~~~~~~pg~~elL~~L~~~g~~l~I~T~~~~~~~~~~l~~~~l~~~~~d~i~~~~~~~~~--------------------  157 (267)
T PRK13478         98 DYATPIPGVLEVIAALRARGIKIGSTTGYTREMMDVVVPLAAAQGYRPDHVVTTDDVPAG--------------------  157 (267)
T ss_pred             hcCCCCCCHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHHhhcCCCceEEEcCCcCCCC--------------------
Confidence            45789999999999996   678999999999999999999988875 889999888764                    


Q ss_pred             ccCCCCHHHHHHHHHHhCCC-CCcEEEEeCChhcHHHHHHcCCeEEEECCCCC---------------------------
Q 027403          129 ILCKPSLEAIETAIRIANVD-PKKTIFFDDSARNIASAKAAGLHTVIVGSSVP---------------------------  180 (224)
Q Consensus       129 ~~~KP~~~~~~~al~~~~~~-~~~~l~VgDs~~Di~~A~~~G~~~v~v~~~~~---------------------------  180 (224)
                         ||+|++|..+++++|+. |++|+||||+.+|+++|+++|+++|+|.++..                           
T Consensus       158 ---KP~p~~~~~a~~~l~~~~~~e~l~IGDs~~Di~aA~~aG~~~i~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (267)
T PRK13478        158 ---RPYPWMALKNAIELGVYDVAACVKVDDTVPGIEEGLNAGMWTVGVILSGNELGLSEEEYQALSAAELAARRERARAR  234 (267)
T ss_pred             ---CCChHHHHHHHHHcCCCCCcceEEEcCcHHHHHHHHHCCCEEEEEccCcccccCCHHHHHhcCHHHHHHHHHHHHHH
Confidence               99999999999999996 69999999999999999999999999998753                           


Q ss_pred             --CCCCceEeCCHhHHHHHHHH
Q 027403          181 --VPPADHALNSIHNIKEAIPE  200 (224)
Q Consensus       181 --~~~~d~~i~~~~dl~~~i~~  200 (224)
                        ..+++++++++.+|.+++..
T Consensus       235 l~~~~a~~vi~~~~~l~~~l~~  256 (267)
T PRK13478        235 LRAAGAHYVIDTIADLPAVIAD  256 (267)
T ss_pred             HHHcCCCeehhhHHHHHHHHHH
Confidence              35689999999999987754

>PRK13226 phosphoglycolate phosphatase; Provisional

Probab=99.84  E-value=8.1e-20  Score=155.87  Aligned_cols=122  Identities=22%  Similarity=0.192  Sum_probs=110.2

Q ss_pred             CCCCChhHHHHHhcCC---CCeEEEeCCChHHHHHHHHHcCCccccceeEeeccCCCCCCCCCCCCCcccccCCcccccc
Q 027403           54 KLKPDPVLRNLLLSMP---QRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRIL  130 (224)
Q Consensus        54 ~~~~~~g~~~~L~~l~---~~~~I~Tn~~~~~~~~~l~~lgl~~~fd~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  130 (224)
                      ...++||+.++|+.|+   .+++|+||++...+...++++|+.++|+.++++++....                      
T Consensus        93 ~~~~~pg~~~~L~~L~~~g~~l~i~Tn~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~----------------------  150 (229)
T PRK13226         93 QSQLFDGVEGMLQRLECAGCVWGIVTNKPEYLARLILPQLGWEQRCAVLIGGDTLAER----------------------  150 (229)
T ss_pred             cCeeCCCHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCchhcccEEEecCcCCCC----------------------
Confidence            4689999999999996   578899999999899999999999999999888877664                      


Q ss_pred             CCCCHHHHHHHHHHhCCCCCcEEEEeCChhcHHHHHHcCCeEEEECCCCC-------CCCCceEeCCHhHHHHHH
Q 027403          131 CKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP-------VPPADHALNSIHNIKEAI  198 (224)
Q Consensus       131 ~KP~~~~~~~al~~~~~~~~~~l~VgDs~~Di~~A~~~G~~~v~v~~~~~-------~~~~d~~i~~~~dl~~~i  198 (224)
                       ||+|++|..+++++|++|++|+||||+.+|+.+|+++|+.++++.+|..       ..+++++++++.+|.+.+
T Consensus       151 -KP~p~~~~~~~~~l~~~p~~~l~IGDs~~Di~aA~~aG~~~i~v~~g~~~~~~~~~~~~~~~~i~~~~el~~~~  224 (229)
T PRK13226        151 -KPHPLPLLVAAERIGVAPTDCVYVGDDERDILAARAAGMPSVAALWGYRLHDDDPLAWQADVLVEQPQLLWNPA  224 (229)
T ss_pred             -CCCHHHHHHHHHHhCCChhhEEEeCCCHHHHHHHHHCCCcEEEEeecCCCCCcChhhcCCCeeeCCHHHHHHHh
Confidence             9999999999999999999999999999999999999999999988753       235899999999998754

>COG1011 Predicted hydrolase (HAD superfamily) [General function prediction only]

Probab=99.83  E-value=4.3e-20  Score=155.47  Aligned_cols=124  Identities=26%  Similarity=0.374  Sum_probs=113.2

Q ss_pred             CCCCChhHHHHHhcCCCC--eEEEeCCChHHHHHHHHHcCCccccceeEeeccCCCCCCCCCCCCCcccccCCccccccC
Q 027403           54 KLKPDPVLRNLLLSMPQR--KIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILC  131 (224)
Q Consensus        54 ~~~~~~g~~~~L~~l~~~--~~I~Tn~~~~~~~~~l~~lgl~~~fd~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  131 (224)
                      .++++|++.+.|+.++.+  ++|+||++.......+.++|+.++||.+++|++++..                       
T Consensus        97 ~~~~~~~~~~~L~~l~~~~~l~ilTNg~~~~~~~~l~~~gl~~~Fd~v~~s~~~g~~-----------------------  153 (229)
T COG1011          97 LLPDYPEALEALKELGKKYKLGILTNGARPHQERKLRQLGLLDYFDAVFISEDVGVA-----------------------  153 (229)
T ss_pred             hCccChhHHHHHHHHHhhccEEEEeCCChHHHHHHHHHcCChhhhheEEEecccccC-----------------------
Confidence            478999999999999855  9999999999999999999999999999999999875                       


Q ss_pred             CCCHHHHHHHHHHhCCCCCcEEEEeCCh-hcHHHHHHcCCeEEEECCCCCC-----CCCceEeCCHhHHHHHHHH
Q 027403          132 KPSLEAIETAIRIANVDPKKTIFFDDSA-RNIASAKAAGLHTVIVGSSVPV-----PPADHALNSIHNIKEAIPE  200 (224)
Q Consensus       132 KP~~~~~~~al~~~~~~~~~~l~VgDs~-~Di~~A~~~G~~~v~v~~~~~~-----~~~d~~i~~~~dl~~~i~~  200 (224)
                      ||+|.+|+.+++++|++|++++||||+. +||.+|+++|+++||+..+...     ..+++.+.++.++.+++..
T Consensus       154 KP~~~~f~~~~~~~g~~p~~~l~VgD~~~~di~gA~~~G~~~vwi~~~~~~~~~~~~~~~~~i~~l~~l~~~~~~  228 (229)
T COG1011         154 KPDPEIFEYALEKLGVPPEEALFVGDSLENDILGARALGMKTVWINRGGKPLPDALEAPDYEISSLAELLDLLER  228 (229)
T ss_pred             CCCcHHHHHHHHHcCCCcceEEEECCChhhhhHHHHhcCcEEEEECCCCCCCCCCccCCceEEcCHHHHHHHHhh
Confidence            9999999999999999999999999998 5789999999999999987532     4689999999999987753

>TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254

Probab=99.83  E-value=8.2e-20  Score=153.28  Aligned_cols=122  Identities=20%  Similarity=0.251  Sum_probs=110.6

Q ss_pred             CCCCChhHHHHHhcCC--CCeEEEeCCChHHHHHHHHHcCCccccceeEeeccCCCCCCCCCCCCCcccccCCccccccC
Q 027403           54 KLKPDPVLRNLLLSMP--QRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILC  131 (224)
Q Consensus        54 ~~~~~~g~~~~L~~l~--~~~~I~Tn~~~~~~~~~l~~lgl~~~fd~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  131 (224)
                      ..+++||+.++|+.++  ++++|+||++...+...++.+|+..+||.++++++.+.+                       
T Consensus        95 ~~~~~~g~~~~L~~l~~~~~~~i~Sn~~~~~~~~~l~~~~l~~~fd~i~~~~~~~~~-----------------------  151 (224)
T TIGR02254        95 GHQLLPGAFELMENLQQKFRLYIVTNGVRETQYKRLRKSGLFPFFDDIFVSEDAGIQ-----------------------  151 (224)
T ss_pred             cCeeCccHHHHHHHHHhcCcEEEEeCCchHHHHHHHHHCCcHhhcCEEEEcCccCCC-----------------------
Confidence            4678999999999997  678999999999999999999999999999999988775                       


Q ss_pred             CCCHHHHHHHHHHh-CCCCCcEEEEeCCh-hcHHHHHHcCCeEEEECCCCC----CCCCceEeCCHhHHHHHH
Q 027403          132 KPSLEAIETAIRIA-NVDPKKTIFFDDSA-RNIASAKAAGLHTVIVGSSVP----VPPADHALNSIHNIKEAI  198 (224)
Q Consensus       132 KP~~~~~~~al~~~-~~~~~~~l~VgDs~-~Di~~A~~~G~~~v~v~~~~~----~~~~d~~i~~~~dl~~~i  198 (224)
                      ||+|.+|..+++++ +++|++++||||+. +|+++|+++|++++++.++..    ..+++++++++.+|.++|
T Consensus       152 KP~~~~~~~~~~~~~~~~~~~~v~igD~~~~di~~A~~~G~~~i~~~~~~~~~~~~~~~~~~~~~~~el~~~~  224 (224)
T TIGR02254       152 KPDKEIFNYALERMPKFSKEEVLMIGDSLTADIKGGQNAGLDTCWMNPDMHPNPDDIIPTYEIRSLEELYEIL  224 (224)
T ss_pred             CCCHHHHHHHHHHhcCCCchheEEECCCcHHHHHHHHHCCCcEEEECCCCCCCCCCCCCceEECCHHHHHhhC
Confidence            99999999999999 99999999999998 799999999999999987632    235789999999998764

This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases.

>TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253

Probab=99.83  E-value=8.7e-20  Score=153.38  Aligned_cols=119  Identities=26%  Similarity=0.408  Sum_probs=107.5

Q ss_pred             CCCCCChhHHHHHhcCC---CCeEEEeCCChHHHHHHHHHcCCccccceeEeeccCCCCCCCCCCCCCcccccCCccccc
Q 027403           53 EKLKPDPVLRNLLLSMP---QRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRI  129 (224)
Q Consensus        53 ~~~~~~~g~~~~L~~l~---~~~~I~Tn~~~~~~~~~l~~lgl~~~fd~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  129 (224)
                      ..+.++||+.++|+.|+   ++++|+||++...+...++++|+.++|+.++++++.+..                     
T Consensus        91 ~~~~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~---------------------  149 (221)
T TIGR02253        91 AYLRVYPGVRDTLMELRESGYRLGIITDGLPVKQWEKLERLGVRDFFDAVITSEEEGVE---------------------  149 (221)
T ss_pred             HhCCCCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHhCChHHhccEEEEeccCCCC---------------------
Confidence            34689999999999996   578899999999999999999999999999999998864                     


Q ss_pred             cCCCCHHHHHHHHHHhCCCCCcEEEEeCCh-hcHHHHHHcCCeEEEECCCCC-------CCCCceEeCCHhHH
Q 027403          130 LCKPSLEAIETAIRIANVDPKKTIFFDDSA-RNIASAKAAGLHTVIVGSSVP-------VPPADHALNSIHNI  194 (224)
Q Consensus       130 ~~KP~~~~~~~al~~~~~~~~~~l~VgDs~-~Di~~A~~~G~~~v~v~~~~~-------~~~~d~~i~~~~dl  194 (224)
                        ||+|++|..+++++|++|++++||||+. +|+.+|+++|+++|++.++..       ...++++++++.+|
T Consensus       150 --KP~~~~~~~~~~~~~~~~~~~~~igDs~~~di~~A~~aG~~~i~~~~~~~~~~~~~~~~~~~~~i~~~~el  220 (221)
T TIGR02253       150 --KPHPKIFYAALKRLGVKPEEAVMVGDRLDKDIKGAKNLGMKTVWINQGKSSKMEDDVYPYPDYEISSLREL  220 (221)
T ss_pred             --CCCHHHHHHHHHHcCCChhhEEEECCChHHHHHHHHHCCCEEEEECCCCCcccccccccCCCeeeCcHHhh
Confidence              9999999999999999999999999998 899999999999999988753       23478899998876

This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549).

>PRK14988 GMP/IMP nucleotidase; Provisional

Probab=99.83  E-value=9.2e-20  Score=155.47  Aligned_cols=127  Identities=17%  Similarity=0.240  Sum_probs=110.6

Q ss_pred             CCCCCChhHHHHHhcCC---CCeEEEeCCChHHHHHHHHHcCCccccceeEeeccCCCCCCCCCCCCCcccccCCccccc
Q 027403           53 EKLKPDPVLRNLLLSMP---QRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRI  129 (224)
Q Consensus        53 ~~~~~~~g~~~~L~~l~---~~~~I~Tn~~~~~~~~~l~~lgl~~~fd~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  129 (224)
                      ....++||+.++|+.|+   ++++|+||+++..+...++++|+.++|+.++++++++..                     
T Consensus        90 ~~~~~~~g~~e~L~~Lk~~g~~~~i~Tn~~~~~~~~~l~~~~l~~~fd~iv~s~~~~~~---------------------  148 (224)
T PRK14988         90 PRAVLREDTVPFLEALKASGKRRILLTNAHPHNLAVKLEHTGLDAHLDLLLSTHTFGYP---------------------  148 (224)
T ss_pred             ccCCcCCCHHHHHHHHHhCCCeEEEEeCcCHHHHHHHHHHCCcHHHCCEEEEeeeCCCC---------------------
Confidence            45789999999999997   578999999999999999999999999999999988764                     


Q ss_pred             cCCCCHHHHHHHHHHhCCCCCcEEEEeCChhcHHHHHHcCCeE-EEECCCCC--CCCCceEeCCHhHHHHHHHHHH
Q 027403          130 LCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHT-VIVGSSVP--VPPADHALNSIHNIKEAIPEIW  202 (224)
Q Consensus       130 ~~KP~~~~~~~al~~~~~~~~~~l~VgDs~~Di~~A~~~G~~~-v~v~~~~~--~~~~d~~i~~~~dl~~~i~~~~  202 (224)
                        ||+|++|..+++++|++|++|+||||+..|+++|+++|+++ ++|.++..  ...+.....++.++.+++..++
T Consensus       149 --KP~p~~~~~~~~~~~~~p~~~l~igDs~~di~aA~~aG~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  222 (224)
T PRK14988        149 --KEDQRLWQAVAEHTGLKAERTLFIDDSEPILDAAAQFGIRYCLGVTNPDSGIAEKQYQRHPSLNDYRRLIPSLM  222 (224)
T ss_pred             --CCCHHHHHHHHHHcCCChHHEEEEcCCHHHHHHHHHcCCeEEEEEeCCCCCccchhccCCCcHHHHHHHhhhhc
Confidence              99999999999999999999999999999999999999985 67877654  2335556678888888776654

>PLN02575 haloacid dehalogenase-like hydrolase

Probab=99.82  E-value=2.8e-19  Score=163.43  Aligned_cols=131  Identities=18%  Similarity=0.271  Sum_probs=115.1

Q ss_pred             CCCCCChhHHHHHhcCC---CCeEEEeCCChHHHHHHHHHcCCccccceeEeeccCCCCCCCCCCCCCcccccCCccccc
Q 027403           53 EKLKPDPVLRNLLLSMP---QRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRI  129 (224)
Q Consensus        53 ~~~~~~~g~~~~L~~l~---~~~~I~Tn~~~~~~~~~l~~lgl~~~fd~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  129 (224)
                      ....++||+.++|+.|+   ++++|+||+++..+...++++|+.+||+.|++++++...                     
T Consensus       213 ~~~~l~pGa~ElL~~Lk~~GiklaIaSn~~~~~~~~~L~~lgL~~yFd~Iv~sddv~~~---------------------  271 (381)
T PLN02575        213 GIYRLRTGSQEFVNVLMNYKIPMALVSTRPRKTLENAIGSIGIRGFFSVIVAAEDVYRG---------------------  271 (381)
T ss_pred             cCCCcCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCHHHceEEEecCcCCCC---------------------
Confidence            34678999999999996   688999999999999999999999999999999998764                     


Q ss_pred             cCCCCHHHHHHHHHHhCCCCCcEEEEeCChhcHHHHHHcCCeEEEECCCCC---CCCCceEeCCHhHHHHHH-HHHHhhc
Q 027403          130 LCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP---VPPADHALNSIHNIKEAI-PEIWEGE  205 (224)
Q Consensus       130 ~~KP~~~~~~~al~~~~~~~~~~l~VgDs~~Di~~A~~~G~~~v~v~~~~~---~~~~d~~i~~~~dl~~~i-~~~~~~~  205 (224)
                        ||+|++|..+++++|++|++|++|||+..||++|+++|+++|++.++..   ...++++++++.+|.-.. ..++.-+
T Consensus       272 --KP~Peifl~A~~~lgl~Peecl~IGDS~~DIeAAk~AGm~~IgV~~~~~~~~l~~Ad~iI~s~~EL~~~~l~~l~~~~  349 (381)
T PLN02575        272 --KPDPEMFIYAAQLLNFIPERCIVFGNSNQTVEAAHDARMKCVAVASKHPIYELGAADLVVRRLDELSIVDLKNLADIE  349 (381)
T ss_pred             --CCCHHHHHHHHHHcCCCcccEEEEcCCHHHHHHHHHcCCEEEEECCCCChhHhcCCCEEECCHHHHHHHHHhhhhhcC
Confidence              9999999999999999999999999999999999999999999987643   335899999999995433 4455444


Q ss_pred             C
Q 027403          206 G  206 (224)
Q Consensus       206 ~  206 (224)
                      +
T Consensus       350 ~  350 (381)
T PLN02575        350 S  350 (381)
T ss_pred             c
Confidence            3

>PLN02940 riboflavin kinase

Probab=99.81  E-value=2.1e-19  Score=164.78  Aligned_cols=166  Identities=20%  Similarity=0.276  Sum_probs=129.5

Q ss_pred             ccCCCCcccHHHHHHHHHHHhCccHHHHH-----HccCCCCHHHHHHHHhccCC--CCCCCCChhHHHHHhcCC---CCe
Q 027403            3 QHLHIDESEVPRMCLELYREHGTTMAGLK-----AVGYEFDNDEFHAFVHGKLP--YEKLKPDPVLRNLLLSMP---QRK   72 (224)
Q Consensus         3 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~--~~~~~~~~g~~~~L~~l~---~~~   72 (224)
                      +++|++...     ++....+|.+...+.     ..+...+.+++...+...+.  ...+.++||+.++|+.|+   .++
T Consensus        38 ~~~G~~~~~-----~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~pGv~elL~~Lk~~g~~l  112 (382)
T PLN02940         38 VKYGKQWDG-----REAQKIVGKTPLEAAATVVEDYGLPCSTDEFNSEITPLLSEQWCNIKALPGANRLIKHLKSHGVPM  112 (382)
T ss_pred             HHcCCCCCH-----HHHHHhcCCCHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHccCCCCcCHHHHHHHHHHCCCcE
Confidence            345655443     234455555533321     23445555555444433211  245789999999999997   678


Q ss_pred             EEEeCCChHHHHHHHH-HcCCccccceeEeeccCCCCCCCCCCCCCcccccCCccccccCCCCHHHHHHHHHHhCCCCCc
Q 027403           73 IIFTNADQKHAMEVLG-RLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCKPSLEAIETAIRIANVDPKK  151 (224)
Q Consensus        73 ~I~Tn~~~~~~~~~l~-~lgl~~~fd~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~~~~~~~al~~~~~~~~~  151 (224)
                      +|+||+++..+...++ ++|+.++|+.+++++++...                       ||+|++|..++++++++|++
T Consensus       113 ~IvTn~~~~~~~~~l~~~~gl~~~Fd~ii~~d~v~~~-----------------------KP~p~~~~~a~~~lgv~p~~  169 (382)
T PLN02940        113 ALASNSPRANIEAKISCHQGWKESFSVIVGGDEVEKG-----------------------KPSPDIFLEAAKRLNVEPSN  169 (382)
T ss_pred             EEEeCCcHHHHHHHHHhccChHhhCCEEEehhhcCCC-----------------------CCCHHHHHHHHHHcCCChhH
Confidence            9999999999998887 78999999999999998764                       99999999999999999999


Q ss_pred             EEEEeCChhcHHHHHHcCCeEEEECCCCC----CCCCceEeCCHhHHHH
Q 027403          152 TIFFDDSARNIASAKAAGLHTVIVGSSVP----VPPADHALNSIHNIKE  196 (224)
Q Consensus       152 ~l~VgDs~~Di~~A~~~G~~~v~v~~~~~----~~~~d~~i~~~~dl~~  196 (224)
                      |++|||+..|+++|+++|++++++.++..    ...++++++++.++..
T Consensus       170 ~l~VGDs~~Di~aA~~aGi~~I~v~~g~~~~~~~~~ad~~i~sl~el~~  218 (382)
T PLN02940        170 CLVIEDSLPGVMAGKAAGMEVIAVPSIPKQTHLYSSADEVINSLLDLQP  218 (382)
T ss_pred             EEEEeCCHHHHHHHHHcCCEEEEECCCCcchhhccCccEEeCCHhHcCH
Confidence            99999999999999999999999998753    4568999999999864

>TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II

Probab=99.81  E-value=3e-19  Score=148.20  Aligned_cols=103  Identities=21%  Similarity=0.391  Sum_probs=96.9

Q ss_pred             CCCCChhHHHHHhcCC---CCeEEEeCCChHHHHHHHHHcCCccccceeEeeccCCCCCCCCCCCCCcccccCCcccccc
Q 027403           54 KLKPDPVLRNLLLSMP---QRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRIL  130 (224)
Q Consensus        54 ~~~~~~g~~~~L~~l~---~~~~I~Tn~~~~~~~~~l~~lgl~~~fd~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  130 (224)
                      .++++||+.++|+.|+   ++++|+||++...+...++++|+.++||.++++++++..                      
T Consensus        90 ~~~~~~~~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~gl~~~fd~i~~s~~~~~~----------------------  147 (198)
T TIGR01428        90 RLPPHPDVPAGLRALKERGYRLAILSNGSPAMLKSLVKHAGLDDPFDAVLSADAVRAY----------------------  147 (198)
T ss_pred             cCCCCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHCCChhhhheeEehhhcCCC----------------------
Confidence            4679999999999996   678999999999999999999999999999999998875                      


Q ss_pred             CCCCHHHHHHHHHHhCCCCCcEEEEeCChhcHHHHHHcCCeEEEECCCC
Q 027403          131 CKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSV  179 (224)
Q Consensus       131 ~KP~~~~~~~al~~~~~~~~~~l~VgDs~~Di~~A~~~G~~~v~v~~~~  179 (224)
                       ||+|.+|..+++++|++|++|++|||+..|+.+|+++|+++||+.++.
T Consensus       148 -KP~~~~~~~~~~~~~~~p~~~~~vgD~~~Di~~A~~~G~~~i~v~r~~  195 (198)
T TIGR01428       148 -KPAPQVYQLALEALGVPPDEVLFVASNPWDLGGAKKFGFKTAWVNRPG  195 (198)
T ss_pred             -CCCHHHHHHHHHHhCCChhhEEEEeCCHHHHHHHHHCCCcEEEecCCC
Confidence             999999999999999999999999999999999999999999998765

Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related.

>PRK11587 putative phosphatase; Provisional

Probab=99.81  E-value=4.1e-19  Score=150.12  Aligned_cols=119  Identities=21%  Similarity=0.261  Sum_probs=105.7

Q ss_pred             CCCCCChhHHHHHhcCC---CCeEEEeCCChHHHHHHHHHcCCccccceeEeeccCCCCCCCCCCCCCcccccCCccccc
Q 027403           53 EKLKPDPVLRNLLLSMP---QRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRI  129 (224)
Q Consensus        53 ~~~~~~~g~~~~L~~l~---~~~~I~Tn~~~~~~~~~l~~lgl~~~fd~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  129 (224)
                      +...++||+.++|+.|+   ++++|+||++.......++.+|+ .+|+.+++++++...                     
T Consensus        80 ~~~~~~pg~~e~L~~L~~~g~~~~ivTn~~~~~~~~~l~~~~l-~~~~~i~~~~~~~~~---------------------  137 (218)
T PRK11587         80 EGITALPGAIALLNHLNKLGIPWAIVTSGSVPVASARHKAAGL-PAPEVFVTAERVKRG---------------------  137 (218)
T ss_pred             cCceeCcCHHHHHHHHHHcCCcEEEEcCCCchHHHHHHHhcCC-CCccEEEEHHHhcCC---------------------
Confidence            46789999999999996   68999999998888888899998 467888888887664                     


Q ss_pred             cCCCCHHHHHHHHHHhCCCCCcEEEEeCChhcHHHHHHcCCeEEEECCCCC---CCCCceEeCCHhHHH
Q 027403          130 LCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP---VPPADHALNSIHNIK  195 (224)
Q Consensus       130 ~~KP~~~~~~~al~~~~~~~~~~l~VgDs~~Di~~A~~~G~~~v~v~~~~~---~~~~d~~i~~~~dl~  195 (224)
                        ||+|.+|..+++++|++|++|+|||||..|+++|+++|+.++++.++..   ...++++++++.+|.
T Consensus       138 --KP~p~~~~~~~~~~g~~p~~~l~igDs~~di~aA~~aG~~~i~v~~~~~~~~~~~~~~~~~~~~el~  204 (218)
T PRK11587        138 --KPEPDAYLLGAQLLGLAPQECVVVEDAPAGVLSGLAAGCHVIAVNAPADTPRLDEVDLVLHSLEQLT  204 (218)
T ss_pred             --CCCcHHHHHHHHHcCCCcccEEEEecchhhhHHHHHCCCEEEEECCCCchhhhccCCEEecchhhee
Confidence              9999999999999999999999999999999999999999999987653   345899999999875

>PRK10826 2-deoxyglucose-6-phosphatase; Provisional

Probab=99.80  E-value=4.8e-19  Score=149.81  Aligned_cols=121  Identities=22%  Similarity=0.250  Sum_probs=110.2

Q ss_pred             CCCCCChhHHHHHhcCC---CCeEEEeCCChHHHHHHHHHcCCccccceeEeeccCCCCCCCCCCCCCcccccCCccccc
Q 027403           53 EKLKPDPVLRNLLLSMP---QRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRI  129 (224)
Q Consensus        53 ~~~~~~~g~~~~L~~l~---~~~~I~Tn~~~~~~~~~l~~lgl~~~fd~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  129 (224)
                      ....++||+.++|+.|+   ++++|+||++...+...++++|+.++|+.++++++++..                     
T Consensus        89 ~~~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~---------------------  147 (222)
T PRK10826         89 ETRPLLPGVREALALCKAQGLKIGLASASPLHMLEAVLTMFDLRDYFDALASAEKLPYS---------------------  147 (222)
T ss_pred             cCCCCCCCHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHhCcchhcccEEEEcccCCCC---------------------
Confidence            35789999999999996   689999999999999999999999999999999887764                     


Q ss_pred             cCCCCHHHHHHHHHHhCCCCCcEEEEeCChhcHHHHHHcCCeEEEECCCCC-----CCCCceEeCCHhHHHH
Q 027403          130 LCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP-----VPPADHALNSIHNIKE  196 (224)
Q Consensus       130 ~~KP~~~~~~~al~~~~~~~~~~l~VgDs~~Di~~A~~~G~~~v~v~~~~~-----~~~~d~~i~~~~dl~~  196 (224)
                        ||+|++|..+++++|++|++|++|||+.+|+.+|+++|++++++.++..     ...+++++.|+.||..
T Consensus       148 --Kp~~~~~~~~~~~~~~~~~~~~~igDs~~Di~aA~~aG~~~i~v~~~~~~~~~~~~~~~~~~~~~~dl~~  217 (222)
T PRK10826        148 --KPHPEVYLNCAAKLGVDPLTCVALEDSFNGMIAAKAARMRSIVVPAPEQQNDPRWALADVKLESLTELTA  217 (222)
T ss_pred             --CCCHHHHHHHHHHcCCCHHHeEEEcCChhhHHHHHHcCCEEEEecCCccCchhhhhhhheeccCHHHHhh
Confidence              9999999999999999999999999999999999999999999988753     2358999999999864

>PRK13225 phosphoglycolate phosphatase; Provisional

Probab=99.80  E-value=1.9e-18  Score=151.92  Aligned_cols=125  Identities=18%  Similarity=0.265  Sum_probs=112.0

Q ss_pred             CCCCCChhHHHHHhcCC---CCeEEEeCCChHHHHHHHHHcCCccccceeEeeccCCCCCCCCCCCCCcccccCCccccc
Q 027403           53 EKLKPDPVLRNLLLSMP---QRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRI  129 (224)
Q Consensus        53 ~~~~~~~g~~~~L~~l~---~~~~I~Tn~~~~~~~~~l~~lgl~~~fd~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  129 (224)
                      ..++++||+.++|+.|+   .+++|+||++...+...++++|+.++|+.+++++..                        
T Consensus       139 ~~~~l~pg~~e~L~~L~~~gi~laIvSn~~~~~~~~~L~~~gl~~~F~~vi~~~~~------------------------  194 (273)
T PRK13225        139 PALQLFPGVADLLAQLRSRSLCLGILSSNSRQNIEAFLQRQGLRSLFSVVQAGTPI------------------------  194 (273)
T ss_pred             ccCCcCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCChhheEEEEecCCC------------------------
Confidence            45789999999999997   678899999999999999999999999988877654                        


Q ss_pred             cCCCCHHHHHHHHHHhCCCCCcEEEEeCChhcHHHHHHcCCeEEEECCCCC------CCCCceEeCCHhHHHHHHHHHHh
Q 027403          130 LCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP------VPPADHALNSIHNIKEAIPEIWE  203 (224)
Q Consensus       130 ~~KP~~~~~~~al~~~~~~~~~~l~VgDs~~Di~~A~~~G~~~v~v~~~~~------~~~~d~~i~~~~dl~~~i~~~~~  203 (224)
                        +|++..|..++++++++|++|+||||+..|+++|+++|+.++++.++..      ..+++++++++.+|.+++.+++.
T Consensus       195 --~~k~~~~~~~l~~~~~~p~~~l~IGDs~~Di~aA~~AG~~~I~v~~g~~~~~~l~~~~ad~~i~~~~eL~~~~~~~~~  272 (273)
T PRK13225        195 --LSKRRALSQLVAREGWQPAAVMYVGDETRDVEAARQVGLIAVAVTWGFNDRQSLVAACPDWLLETPSDLLQAVTQLMR  272 (273)
T ss_pred             --CCCHHHHHHHHHHhCcChhHEEEECCCHHHHHHHHHCCCeEEEEecCCCCHHHHHHCCCCEEECCHHHHHHHHHHHhc
Confidence              3456899999999999999999999999999999999999999998854      34699999999999999888764

>PRK13223 phosphoglycolate phosphatase; Provisional

Probab=99.80  E-value=2e-18  Score=151.43  Aligned_cols=124  Identities=20%  Similarity=0.320  Sum_probs=111.7

Q ss_pred             CCCCChhHHHHHhcCC---CCeEEEeCCChHHHHHHHHHcCCccccceeEeeccCCCCCCCCCCCCCcccccCCcccccc
Q 027403           54 KLKPDPVLRNLLLSMP---QRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRIL  130 (224)
Q Consensus        54 ~~~~~~g~~~~L~~l~---~~~~I~Tn~~~~~~~~~l~~lgl~~~fd~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  130 (224)
                      ...++||+.++|+.|+   ++++|+||++...+...++++|+..+|+.++++++++..                      
T Consensus        99 ~~~~~~g~~e~L~~Lk~~g~~l~ivTn~~~~~~~~~l~~~~i~~~f~~i~~~d~~~~~----------------------  156 (272)
T PRK13223         99 LTVVYPGVRDTLKWLKKQGVEMALITNKPERFVAPLLDQMKIGRYFRWIIGGDTLPQK----------------------  156 (272)
T ss_pred             CCccCCCHHHHHHHHHHCCCeEEEEECCcHHHHHHHHHHcCcHhhCeEEEecCCCCCC----------------------
Confidence            4678999999999996   688999999999999999999999999999999887664                      


Q ss_pred             CCCCHHHHHHHHHHhCCCCCcEEEEeCChhcHHHHHHcCCeEEEECCCCC------CCCCceEeCCHhHHHHHHHH
Q 027403          131 CKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP------VPPADHALNSIHNIKEAIPE  200 (224)
Q Consensus       131 ~KP~~~~~~~al~~~~~~~~~~l~VgDs~~Di~~A~~~G~~~v~v~~~~~------~~~~d~~i~~~~dl~~~i~~  200 (224)
                       ||+|.+|..+++++|++|++|++|||+.+|+++|+++|+++++|.+|..      ...++++++++.+|.+++..
T Consensus       157 -Kp~p~~~~~~~~~~g~~~~~~l~IGD~~~Di~aA~~aGi~~i~v~~G~~~~~~l~~~~~~~vi~~l~el~~~~~~  231 (272)
T PRK13223        157 -KPDPAALLFVMKMAGVPPSQSLFVGDSRSDVLAAKAAGVQCVALSYGYNHGRPIAEESPALVIDDLRALLPGCAD  231 (272)
T ss_pred             -CCCcHHHHHHHHHhCCChhHEEEECCCHHHHHHHHHCCCeEEEEecCCCCchhhhhcCCCEEECCHHHHHHHHhc
Confidence             9999999999999999999999999999999999999999999988743      34689999999999876553

>PRK13222 phosphoglycolate phosphatase; Provisional

Probab=99.79  E-value=2.8e-18  Score=144.33  Aligned_cols=124  Identities=21%  Similarity=0.301  Sum_probs=112.8

Q ss_pred             CCCCChhHHHHHhcCC---CCeEEEeCCChHHHHHHHHHcCCccccceeEeeccCCCCCCCCCCCCCcccccCCcccccc
Q 027403           54 KLKPDPVLRNLLLSMP---QRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRIL  130 (224)
Q Consensus        54 ~~~~~~g~~~~L~~l~---~~~~I~Tn~~~~~~~~~l~~lgl~~~fd~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  130 (224)
                      ...++||+.++|+.++   ++++|+||+....+...++++|+..+|+.++++++....                      
T Consensus        91 ~~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~----------------------  148 (226)
T PRK13222         91 GSRLYPGVKETLAALKAAGYPLAVVTNKPTPFVAPLLEALGIADYFSVVIGGDSLPNK----------------------  148 (226)
T ss_pred             cCccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCccCccEEEcCCCCCCC----------------------
Confidence            4689999999999997   678899999999999999999999999999998887664                      


Q ss_pred             CCCCHHHHHHHHHHhCCCCCcEEEEeCChhcHHHHHHcCCeEEEECCCCC------CCCCceEeCCHhHHHHHHHH
Q 027403          131 CKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP------VPPADHALNSIHNIKEAIPE  200 (224)
Q Consensus       131 ~KP~~~~~~~al~~~~~~~~~~l~VgDs~~Di~~A~~~G~~~v~v~~~~~------~~~~d~~i~~~~dl~~~i~~  200 (224)
                       ||+|.+|..++++++++|++|++|||+.+|+.+|+++|++++++.+|..      ..+++++++++.+|..++.+
T Consensus       149 -kp~~~~~~~~~~~~~~~~~~~i~igD~~~Di~~a~~~g~~~i~v~~g~~~~~~~~~~~~~~~i~~~~~l~~~l~~  223 (226)
T PRK13222        149 -KPDPAPLLLACEKLGLDPEEMLFVGDSRNDIQAARAAGCPSVGVTYGYNYGEPIALSEPDVVIDHFAELLPLLGL  223 (226)
T ss_pred             -CcChHHHHHHHHHcCCChhheEEECCCHHHHHHHHHCCCcEEEECcCCCCccchhhcCCCEEECCHHHHHHHHHH
Confidence             9999999999999999999999999999999999999999999998753      24688999999999988754

>COG0637 Predicted phosphatase/phosphohexomutase [General function prediction only]

Probab=99.79  E-value=1e-18  Score=148.92  Aligned_cols=124  Identities=29%  Similarity=0.390  Sum_probs=107.7

Q ss_pred             CCCCCCChhHHHHHhcCC---CCeEEEeCCChHHHHHHHHHcCCccccceeEeeccCCCCCCCCCCCCCcccccCCcccc
Q 027403           52 YEKLKPDPVLRNLLLSMP---QRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQR  128 (224)
Q Consensus        52 ~~~~~~~~g~~~~L~~l~---~~~~I~Tn~~~~~~~~~l~~lgl~~~fd~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~  128 (224)
                      .+..++.||+.++|..|+   ..++++||+++..+...++.+|+.++|+.+++++++...                    
T Consensus        82 ~~~~~~~pGv~~~l~~L~~~~i~~avaS~s~~~~~~~~L~~~gl~~~f~~~v~~~dv~~~--------------------  141 (221)
T COG0637          82 LEGLKPIPGVVELLEQLKARGIPLAVASSSPRRAAERVLARLGLLDYFDVIVTADDVARG--------------------  141 (221)
T ss_pred             hcCCCCCccHHHHHHHHHhcCCcEEEecCChHHHHHHHHHHccChhhcchhccHHHHhcC--------------------
Confidence            456899999999999998   678899999999999999999999999999999998874                    


Q ss_pred             ccCCCCHHHHHHHHHHhCCCCCcEEEEeCChhcHHHHHHcCCeEEEECCCCC--------CCCCceEeCCHhHHHHHH
Q 027403          129 ILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP--------VPPADHALNSIHNIKEAI  198 (224)
Q Consensus       129 ~~~KP~~~~~~~al~~~~~~~~~~l~VgDs~~Di~~A~~~G~~~v~v~~~~~--------~~~~d~~i~~~~dl~~~i  198 (224)
                         ||+|++|..+++++|++|++|+.|+||.++|++|+++||.+|++..+..        ....+..+.++.++...+
T Consensus       142 ---KP~Pd~yL~Aa~~Lgv~P~~CvviEDs~~Gi~Aa~aAGm~vv~v~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~  216 (221)
T COG0637         142 ---KPAPDIYLLAAERLGVDPEECVVVEDSPAGIQAAKAAGMRVVGVPAGHDRPHLDPLDAHGADTVLLDLAELPALL  216 (221)
T ss_pred             ---CCCCHHHHHHHHHcCCChHHeEEEecchhHHHHHHHCCCEEEEecCCCCccccchhhhhhcchhhccHHHHHHHH
Confidence               9999999999999999999999999999999999999999999987433        122445555555555444

>PLN02811 hydrolase

Probab=99.78  E-value=1.4e-18  Score=147.20  Aligned_cols=120  Identities=23%  Similarity=0.274  Sum_probs=102.0

Q ss_pred             CCCCChhHHHHHhcCC---CCeEEEeCCChHHHHH-HHHHcCCccccceeEeec--cCCCCCCCCCCCCCcccccCCccc
Q 027403           54 KLKPDPVLRNLLLSMP---QRKIIFTNADQKHAME-VLGRLGLEDCFEGIICFE--TINPRLQPADNTDGIENNSFSSNQ  127 (224)
Q Consensus        54 ~~~~~~g~~~~L~~l~---~~~~I~Tn~~~~~~~~-~l~~lgl~~~fd~ii~~~--~~~~~~~~~~~~~~~~~~~~~~~~  127 (224)
                      ...++||+.++|+.|+   ++++|+||+++..+.. .++..++.++|+.+++++  ++...                   
T Consensus        76 ~~~l~~gv~e~l~~L~~~g~~~~i~S~~~~~~~~~~~~~~~~l~~~f~~i~~~~~~~~~~~-------------------  136 (220)
T PLN02811         76 TSDLMPGAERLVRHLHAKGIPIAIATGSHKRHFDLKTQRHGELFSLMHHVVTGDDPEVKQG-------------------  136 (220)
T ss_pred             hCCCCccHHHHHHHHHHCCCcEEEEeCCchhhHHHHHcccHHHHhhCCEEEECChhhccCC-------------------
Confidence            4678999999999996   6899999998865554 444457889999999999  76653                   


Q ss_pred             cccCCCCHHHHHHHHHHhC---CCCCcEEEEeCChhcHHHHHHcCCeEEEECCCCC----CCCCceEeCCHhHHHH
Q 027403          128 RILCKPSLEAIETAIRIAN---VDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP----VPPADHALNSIHNIKE  196 (224)
Q Consensus       128 ~~~~KP~~~~~~~al~~~~---~~~~~~l~VgDs~~Di~~A~~~G~~~v~v~~~~~----~~~~d~~i~~~~dl~~  196 (224)
                          ||+|++|..++++++   ++|++|+||||+..|+++|+++|+++|++.++..    ..+++++++++.++..
T Consensus       137 ----KP~p~~~~~a~~~~~~~~~~~~~~v~IgDs~~di~aA~~aG~~~i~v~~~~~~~~~~~~~d~vi~~~~e~~~  208 (220)
T PLN02811        137 ----KPAPDIFLAAARRFEDGPVDPGKVLVFEDAPSGVEAAKNAGMSVVMVPDPRLDKSYCKGADQVLSSLLDFKP  208 (220)
T ss_pred             ----CCCcHHHHHHHHHhCCCCCCccceEEEeccHhhHHHHHHCCCeEEEEeCCCCcHhhhhchhhHhcCHhhCCH
Confidence                999999999999997   9999999999999999999999999999988642    3357888888887553

>PRK10748 flavin mononucleotide phosphatase; Provisional

Probab=99.78  E-value=1.8e-18  Score=148.46  Aligned_cols=117  Identities=15%  Similarity=0.200  Sum_probs=103.0

Q ss_pred             CCCCChhHHHHHhcCC--CCeEEEeCCChHHHHHHHHHcCCccccceeEeeccCCCCCCCCCCCCCcccccCCccccccC
Q 027403           54 KLKPDPVLRNLLLSMP--QRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILC  131 (224)
Q Consensus        54 ~~~~~~g~~~~L~~l~--~~~~I~Tn~~~~~~~~~l~~lgl~~~fd~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  131 (224)
                      .+.++||+.++|+.|+  ++++|+||++..     ++++|+.++|+.++++++....                       
T Consensus       111 ~~~~~~gv~~~L~~L~~~~~l~i~Tn~~~~-----~~~~gl~~~fd~i~~~~~~~~~-----------------------  162 (238)
T PRK10748        111 RIDVPQATHDTLKQLAKKWPLVAITNGNAQ-----PELFGLGDYFEFVLRAGPHGRS-----------------------  162 (238)
T ss_pred             cCCCCccHHHHHHHHHcCCCEEEEECCCch-----HHHCCcHHhhceeEecccCCcC-----------------------
Confidence            4789999999999997  679999998765     4789999999999999988764                       


Q ss_pred             CCCHHHHHHHHHHhCCCCCcEEEEeCC-hhcHHHHHHcCCeEEEECCCCC--------CCCCceEeCCHhHHHHHH
Q 027403          132 KPSLEAIETAIRIANVDPKKTIFFDDS-ARNIASAKAAGLHTVIVGSSVP--------VPPADHALNSIHNIKEAI  198 (224)
Q Consensus       132 KP~~~~~~~al~~~~~~~~~~l~VgDs-~~Di~~A~~~G~~~v~v~~~~~--------~~~~d~~i~~~~dl~~~i  198 (224)
                      ||+|.+|..+++++|++|++|+||||+ ..|+.+|+++|++++|+..+..        ...+++.+.++.+|.+++
T Consensus       163 KP~p~~~~~a~~~~~~~~~~~~~VGD~~~~Di~~A~~aG~~~i~v~~~~~~~~~~~~~~~~p~~~i~~l~el~~~~  238 (238)
T PRK10748        163 KPFSDMYHLAAEKLNVPIGEILHVGDDLTTDVAGAIRCGMQACWINPENGDLMQTWDSRLLPHIEISRLASLTSLI  238 (238)
T ss_pred             CCcHHHHHHHHHHcCCChhHEEEEcCCcHHHHHHHHHCCCeEEEEcCCCccccccccccCCCCEEECCHHHHHhhC
Confidence            999999999999999999999999999 4899999999999999987532        134788999999998764

>PRK10725 fructose-1-P/6-phosphogluconate phosphatase; Provisional

Probab=99.77  E-value=3e-18  Score=140.64  Aligned_cols=100  Identities=22%  Similarity=0.437  Sum_probs=92.1

Q ss_pred             CCCCCChhHHHHHhcCC--CCeEEEeCCChHHHHHHHHHcCCccccceeEeeccCCCCCCCCCCCCCcccccCCcccccc
Q 027403           53 EKLKPDPVLRNLLLSMP--QRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRIL  130 (224)
Q Consensus        53 ~~~~~~~g~~~~L~~l~--~~~~I~Tn~~~~~~~~~l~~lgl~~~fd~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  130 (224)
                      ....++|+ .++|..|+  ++++|+||++...+...++++|+.++|+.|++++++...                      
T Consensus        85 ~~~~~~~~-~e~L~~L~~~~~l~I~T~~~~~~~~~~l~~~~l~~~fd~i~~~~~~~~~----------------------  141 (188)
T PRK10725         85 DSVEPLPL-IEVVKAWHGRRPMAVGTGSESAIAEALLAHLGLRRYFDAVVAADDVQHH----------------------  141 (188)
T ss_pred             ccCCCccH-HHHHHHHHhCCCEEEEcCCchHHHHHHHHhCCcHhHceEEEehhhccCC----------------------
Confidence            45677886 47888886  688999999999999999999999999999999998764                      


Q ss_pred             CCCCHHHHHHHHHHhCCCCCcEEEEeCChhcHHHHHHcCCeEEEEC
Q 027403          131 CKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVG  176 (224)
Q Consensus       131 ~KP~~~~~~~al~~~~~~~~~~l~VgDs~~Di~~A~~~G~~~v~v~  176 (224)
                       ||+|++|..++++++++|++|++|||+.+|+++|+++|+++|++.
T Consensus       142 -KP~p~~~~~~~~~~~~~~~~~l~igDs~~di~aA~~aG~~~i~~~  186 (188)
T PRK10725        142 -KPAPDTFLRCAQLMGVQPTQCVVFEDADFGIQAARAAGMDAVDVR  186 (188)
T ss_pred             -CCChHHHHHHHHHcCCCHHHeEEEeccHhhHHHHHHCCCEEEeec
Confidence             999999999999999999999999999999999999999999985

>PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A

Probab=99.76  E-value=1.3e-18  Score=138.71  Aligned_cols=100  Identities=34%  Similarity=0.591  Sum_probs=95.1

Q ss_pred             CCCCCChhHHHHHhcCC---CCeEEEeCCChHHHHHHHHHcCCccccceeEeeccCCCCCCCCCCCCCcccccCCccccc
Q 027403           53 EKLKPDPVLRNLLLSMP---QRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRI  129 (224)
Q Consensus        53 ~~~~~~~g~~~~L~~l~---~~~~I~Tn~~~~~~~~~l~~lgl~~~fd~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  129 (224)
                      ...+++||+.++|..|+   ++++++||++...+...++++|+.++|+.++++++.+..                     
T Consensus        74 ~~~~~~~~~~~~L~~l~~~~~~~~i~Sn~~~~~~~~~l~~~~~~~~f~~i~~~~~~~~~---------------------  132 (176)
T PF13419_consen   74 SKLQPYPGVRELLERLKAKGIPLVIVSNGSRERIERVLERLGLDDYFDEIISSDDVGSR---------------------  132 (176)
T ss_dssp             GGEEESTTHHHHHHHHHHTTSEEEEEESSEHHHHHHHHHHTTHGGGCSEEEEGGGSSSS---------------------
T ss_pred             hccchhhhhhhhhhhcccccceeEEeecCCcccccccccccccccccccccccchhhhh---------------------
Confidence            45789999999999997   789999999999999999999999999999999988875                     


Q ss_pred             cCCCCHHHHHHHHHHhCCCCCcEEEEeCChhcHHHHHHcCCeEEEE
Q 027403          130 LCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIV  175 (224)
Q Consensus       130 ~~KP~~~~~~~al~~~~~~~~~~l~VgDs~~Di~~A~~~G~~~v~v  175 (224)
                        ||++.+|..++++++++|++|+||||+..|+.+|+++|+.+|+|
T Consensus       133 --Kp~~~~~~~~~~~~~~~p~~~~~vgD~~~d~~~A~~~G~~~i~v  176 (176)
T PF13419_consen  133 --KPDPDAYRRALEKLGIPPEEILFVGDSPSDVEAAKEAGIKTIWV  176 (176)
T ss_dssp             --TTSHHHHHHHHHHHTSSGGGEEEEESSHHHHHHHHHTTSEEEEE
T ss_pred             --hhHHHHHHHHHHHcCCCcceEEEEeCCHHHHHHHHHcCCeEEeC
Confidence              99999999999999999999999999999999999999999986

...

>PRK06769 hypothetical protein; Validated

Probab=99.75  E-value=6.3e-18  Score=138.95  Aligned_cols=122  Identities=16%  Similarity=0.139  Sum_probs=99.1

Q ss_pred             CCCCChhHHHHHhcCC---CCeEEEeCCChH--------HHHHHHHHcCCccccceeE-eeccCCCCCCCCCCCCCcccc
Q 027403           54 KLKPDPVLRNLLLSMP---QRKIIFTNADQK--------HAMEVLGRLGLEDCFEGII-CFETINPRLQPADNTDGIENN  121 (224)
Q Consensus        54 ~~~~~~g~~~~L~~l~---~~~~I~Tn~~~~--------~~~~~l~~lgl~~~fd~ii-~~~~~~~~~~~~~~~~~~~~~  121 (224)
                      .+.++||+.++|+.|+   ++++|+||++..        .+...++++|+.++|..+. ++++...              
T Consensus        26 ~~~~~pgv~e~L~~Lk~~G~~l~I~Tn~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~--------------   91 (173)
T PRK06769         26 SFTLFPFTKASLQKLKANHIKIFSFTNQPGIADGIATIADFVQELKGFGFDDIYLCPHKHGDGCEC--------------   91 (173)
T ss_pred             HeEECCCHHHHHHHHHHCCCEEEEEECCchhcCCcCCHHHHHHHHHhCCcCEEEECcCCCCCCCCC--------------
Confidence            5678999999999996   689999998741        2445577788766554433 3444444              


Q ss_pred             cCCccccccCCCCHHHHHHHHHHhCCCCCcEEEEeCChhcHHHHHHcCCeEEEECCCCC------------CCCCceEeC
Q 027403          122 SFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP------------VPPADHALN  189 (224)
Q Consensus       122 ~~~~~~~~~~KP~~~~~~~al~~~~~~~~~~l~VgDs~~Di~~A~~~G~~~v~v~~~~~------------~~~~d~~i~  189 (224)
                               +||+|++|..++++++++|++|+||||+..|+.+|+++|+.+|++.++..            ...++++++
T Consensus        92 ---------~KP~p~~~~~~~~~l~~~p~~~i~IGD~~~Di~aA~~aGi~~i~v~~g~~~~~~~~~~~~l~~~~~~~~~~  162 (173)
T PRK06769         92 ---------RKPSTGMLLQAAEKHGLDLTQCAVIGDRWTDIVAAAKVNATTILVRTGAGYDALHTYRDKWAHIEPNYIAE  162 (173)
T ss_pred             ---------CCCCHHHHHHHHHHcCCCHHHeEEEcCCHHHHHHHHHCCCeEEEEecCCCchhhhhhhcccccCCCcchhh
Confidence                     39999999999999999999999999999999999999999999998752            234889999


Q ss_pred             CHhHHHHHH
Q 027403          190 SIHNIKEAI  198 (224)
Q Consensus       190 ~~~dl~~~i  198 (224)
                      ++.|+.++|
T Consensus       163 ~~~el~~~l  171 (173)
T PRK06769        163 NFEDAVNWI  171 (173)
T ss_pred             CHHHHHHHH
Confidence            999998764

>TIGR01990 bPGM beta-phosphoglucomutase

Probab=99.75  E-value=1e-17  Score=136.83  Aligned_cols=98  Identities=31%  Similarity=0.384  Sum_probs=88.8

Q ss_pred             CCCCChhHHHHHhcCC---CCeEEEeCCChHHHHHHHHHcCCccccceeEeeccCCCCCCCCCCCCCcccccCCcccccc
Q 027403           54 KLKPDPVLRNLLLSMP---QRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRIL  130 (224)
Q Consensus        54 ~~~~~~g~~~~L~~l~---~~~~I~Tn~~~~~~~~~l~~lgl~~~fd~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  130 (224)
                      ...++||+.++|+.|+   ++++|+||+..  ....++++|+.++|+.+++++++...                      
T Consensus        85 ~~~~~pg~~~~L~~L~~~g~~~~i~s~~~~--~~~~l~~~~l~~~f~~~~~~~~~~~~----------------------  140 (185)
T TIGR01990        85 PADVLPGIKNLLDDLKKNNIKIALASASKN--APTVLEKLGLIDYFDAIVDPAEIKKG----------------------  140 (185)
T ss_pred             CcccCccHHHHHHHHHHCCCeEEEEeCCcc--HHHHHHhcCcHhhCcEEEehhhcCCC----------------------
Confidence            3578999999999997   67889999753  45689999999999999999988764                      


Q ss_pred             CCCCHHHHHHHHHHhCCCCCcEEEEeCChhcHHHHHHcCCeEEEEC
Q 027403          131 CKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVG  176 (224)
Q Consensus       131 ~KP~~~~~~~al~~~~~~~~~~l~VgDs~~Di~~A~~~G~~~v~v~  176 (224)
                       ||+|++|..++++++++|++|++|||+.+|+++|+++|+++|+|+
T Consensus       141 -kp~p~~~~~~~~~~~~~~~~~v~vgD~~~di~aA~~aG~~~i~v~  185 (185)
T TIGR01990       141 -KPDPEIFLAAAEGLGVSPSECIGIEDAQAGIEAIKAAGMFAVGVG  185 (185)
T ss_pred             -CCChHHHHHHHHHcCCCHHHeEEEecCHHHHHHHHHcCCEEEecC
Confidence             999999999999999999999999999999999999999999874

The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state.

>TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase

Probab=99.74  E-value=1.6e-17  Score=136.50  Aligned_cols=128  Identities=17%  Similarity=0.156  Sum_probs=98.7

Q ss_pred             CCCCChhHHHHHhcCC---CCeEEEeCCCh---------------HHHHHHHHHcCCccccceeEeeccCCCCCCCCCCC
Q 027403           54 KLKPDPVLRNLLLSMP---QRKIIFTNADQ---------------KHAMEVLGRLGLEDCFEGIICFETINPRLQPADNT  115 (224)
Q Consensus        54 ~~~~~~g~~~~L~~l~---~~~~I~Tn~~~---------------~~~~~~l~~lgl~~~fd~ii~~~~~~~~~~~~~~~  115 (224)
                      .++++||+.++|+.|+   ++++|+||++.               ..+...+.++++.  |+.++.+......       
T Consensus        24 ~~~~~pgv~e~L~~Lk~~G~~l~i~TN~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~--~~~i~~~~~~~~~-------   94 (176)
T TIGR00213        24 NFEFIDGVIDALRELKKMGYALVLVTNQSGIARGYFTEAQFEQLTEWMDWSLAERDVD--LDGIYYCPHHPEG-------   94 (176)
T ss_pred             HeEECCCHHHHHHHHHHCCCEEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHcCCC--ccEEEECCCCCcc-------
Confidence            5788999999999997   68999999984               3555677777776  7776654322110       


Q ss_pred             CCcccccCCccccccCCCCHHHHHHHHHHhCCCCCcEEEEeCChhcHHHHHHcCCeE-EEECCCCC-----CCCCceEeC
Q 027403          116 DGIENNSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHT-VIVGSSVP-----VPPADHALN  189 (224)
Q Consensus       116 ~~~~~~~~~~~~~~~~KP~~~~~~~al~~~~~~~~~~l~VgDs~~Di~~A~~~G~~~-v~v~~~~~-----~~~~d~~i~  189 (224)
                          .+ ..+..+..+||+|.+|..++++++++|++|+||||+..|+++|+++|+++ +++.++..     ..+++++++
T Consensus        95 ----~~-~~~~~~~~~KP~p~~~~~a~~~~~~~~~~~v~VGDs~~Di~aA~~aG~~~~i~v~~g~~~~~~~~~~ad~~i~  169 (176)
T TIGR00213        95 ----VE-EFRQVCDCRKPKPGMLLQARKELHIDMAQSYMVGDKLEDMQAGVAAKVKTNVLVRTGKPITPEAENIADWVLN  169 (176)
T ss_pred             ----cc-cccCCCCCCCCCHHHHHHHHHHcCcChhhEEEEcCCHHHHHHHHHCCCcEEEEEecCCcccccccccCCEEec
Confidence                00 00001112499999999999999999999999999999999999999998 79988864     235899999


Q ss_pred             CHhHHH
Q 027403          190 SIHNIK  195 (224)
Q Consensus       190 ~~~dl~  195 (224)
                      ++.+|.
T Consensus       170 ~~~el~  175 (176)
T TIGR00213       170 SLADLP  175 (176)
T ss_pred             cHHHhh
Confidence            999986

This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812).

>PRK09456 ?-D-glucose-1-phosphatase; Provisional

Probab=99.74  E-value=1.5e-17  Score=138.68  Aligned_cols=120  Identities=17%  Similarity=0.304  Sum_probs=99.6

Q ss_pred             ccCCCCHHHHHHHHhccCCCCCCCCChhHHHHHhcCC---CCeEEEeCCChHHHHHHHHH-cCCccccceeEeeccCCCC
Q 027403           33 VGYEFDNDEFHAFVHGKLPYEKLKPDPVLRNLLLSMP---QRKIIFTNADQKHAMEVLGR-LGLEDCFEGIICFETINPR  108 (224)
Q Consensus        33 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~L~~l~---~~~~I~Tn~~~~~~~~~l~~-lgl~~~fd~ii~~~~~~~~  108 (224)
                      .+...+.+++...+...    ...++||+.++|+.|+   ++++|+||++...+...+.. .++..+||.++++++++.+
T Consensus        65 ~~~~~~~~~~~~~~~~~----~~~~~~g~~e~L~~l~~~g~~~~i~Sn~~~~~~~~~~~~~~~l~~~fd~v~~s~~~~~~  140 (199)
T PRK09456         65 MALSLSYEQFAHGWQAV----FVALRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEEYPEVRAAADHIYLSQDLGMR  140 (199)
T ss_pred             hCCCCCHHHHHHHHHHH----HhccCHHHHHHHHHHHhCCCcEEEEcCCchhhHHHHHhhchhHHHhcCEEEEecccCCC
Confidence            34444555555444331    1358999999999996   68999999998877666655 4788899999999998875


Q ss_pred             CCCCCCCCCcccccCCccccccCCCCHHHHHHHHHHhCCCCCcEEEEeCChhcHHHHHHcCCeEEEECCCC
Q 027403          109 LQPADNTDGIENNSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSV  179 (224)
Q Consensus       109 ~~~~~~~~~~~~~~~~~~~~~~~KP~~~~~~~al~~~~~~~~~~l~VgDs~~Di~~A~~~G~~~v~v~~~~  179 (224)
                                             ||+|++|..+++++|++|++|+||||+..|+.+|+++|++++++.++.
T Consensus       141 -----------------------KP~p~~~~~~~~~~~~~p~~~l~vgD~~~di~aA~~aG~~~i~~~~~~  188 (199)
T PRK09456        141 -----------------------KPEARIYQHVLQAEGFSAADAVFFDDNADNIEAANALGITSILVTDKQ  188 (199)
T ss_pred             -----------------------CCCHHHHHHHHHHcCCChhHeEEeCCCHHHHHHHHHcCCEEEEecCCc
Confidence                                   999999999999999999999999999999999999999999998764

>PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated

Probab=99.74  E-value=3.4e-17  Score=134.87  Aligned_cols=121  Identities=21%  Similarity=0.249  Sum_probs=99.8

Q ss_pred             CCCCChhHHHHHhcCC---CCeEEEeCCCh---------------HHHHHHHHHcCCccccceeEeecc-----CCCCCC
Q 027403           54 KLKPDPVLRNLLLSMP---QRKIIFTNADQ---------------KHAMEVLGRLGLEDCFEGIICFET-----INPRLQ  110 (224)
Q Consensus        54 ~~~~~~g~~~~L~~l~---~~~~I~Tn~~~---------------~~~~~~l~~lgl~~~fd~ii~~~~-----~~~~~~  110 (224)
                      .+.++||+.++|+.|+   ++++|+||++.               ..+...++++|+  .|+.++.+.+     ...   
T Consensus        27 ~~~~~pgv~e~L~~Lk~~g~~l~I~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~--~f~~i~~~~~~~~~~~~~---  101 (181)
T PRK08942         27 EWIPIPGSIEAIARLKQAGYRVVVATNQSGIARGLFTEAQLNALHEKMDWSLADRGG--RLDGIYYCPHHPEDGCDC---  101 (181)
T ss_pred             HeEECCCHHHHHHHHHHCCCEEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHcCC--ccceEEECCCCCCCCCcC---
Confidence            4789999999999996   68899999873               345556777787  4887765432     333   


Q ss_pred             CCCCCCCcccccCCccccccCCCCHHHHHHHHHHhCCCCCcEEEEeCChhcHHHHHHcCCeEEEECCCCC-----CCCC-
Q 027403          111 PADNTDGIENNSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP-----VPPA-  184 (224)
Q Consensus       111 ~~~~~~~~~~~~~~~~~~~~~KP~~~~~~~al~~~~~~~~~~l~VgDs~~Di~~A~~~G~~~v~v~~~~~-----~~~~-  184 (224)
                                          +||+|.+|..++++++++|++|+||||+.+|+.+|+++|+.++++.++..     ...+ 
T Consensus       102 --------------------~KP~p~~~~~~~~~l~~~~~~~~~VgDs~~Di~~A~~aG~~~i~v~~g~~~~~~~~~~~~  161 (181)
T PRK08942        102 --------------------RKPKPGMLLSIAERLNIDLAGSPMVGDSLRDLQAAAAAGVTPVLVRTGKGVTTLAEGAAP  161 (181)
T ss_pred             --------------------CCCCHHHHHHHHHHcCCChhhEEEEeCCHHHHHHHHHCCCeEEEEcCCCCchhhhcccCC
Confidence                                39999999999999999999999999999999999999999999988753     2335 


Q ss_pred             -ceEeCCHhHHHHHHH
Q 027403          185 -DHALNSIHNIKEAIP  199 (224)
Q Consensus       185 -d~~i~~~~dl~~~i~  199 (224)
                       +++++++.++.+++.
T Consensus       162 ~~~ii~~l~el~~~l~  177 (181)
T PRK08942        162 GTWVLDSLADLPQALK  177 (181)
T ss_pred             CceeecCHHHHHHHHH
Confidence             899999999988764

>PRK06698 bifunctional 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase/phosphatase; Validated

Probab=99.73  E-value=4.5e-17  Score=152.37  Aligned_cols=123  Identities=15%  Similarity=0.203  Sum_probs=108.7

Q ss_pred             CCCCCChhHHHHHhcCC---CCeEEEeCCChHHHHHHHHHcCCccccceeEeeccCCCCCCCCCCCCCcccccCCccccc
Q 027403           53 EKLKPDPVLRNLLLSMP---QRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRI  129 (224)
Q Consensus        53 ~~~~~~~g~~~~L~~l~---~~~~I~Tn~~~~~~~~~l~~lgl~~~fd~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  129 (224)
                      ...+++||+.++|+.|+   ++++|+||++...+...++++|+.++|+.+++++++..                      
T Consensus       327 ~~~~l~pG~~e~L~~Lk~~g~~l~IvS~~~~~~~~~~l~~~~l~~~f~~i~~~d~v~~----------------------  384 (459)
T PRK06698        327 GKGALYPNVKEIFTYIKENNCSIYIASNGLTEYLRAIVSYYDLDQWVTETFSIEQINS----------------------  384 (459)
T ss_pred             cCCCcCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHCCcHhhcceeEecCCCCC----------------------
Confidence            35789999999999996   67999999999999999999999999999999988743                      


Q ss_pred             cCCCCHHHHHHHHHHhCCCCCcEEEEeCChhcHHHHHHcCCeEEEECCCCC----CCCCceEeCCHhHHHHHHHHH
Q 027403          130 LCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP----VPPADHALNSIHNIKEAIPEI  201 (224)
Q Consensus       130 ~~KP~~~~~~~al~~~~~~~~~~l~VgDs~~Di~~A~~~G~~~v~v~~~~~----~~~~d~~i~~~~dl~~~i~~~  201 (224)
                        ||+|++|..++++++  |++|++|||+.+|+.+|+++|+.++++.++..    ...++++++++.++.+++..+
T Consensus       385 --~~kP~~~~~al~~l~--~~~~v~VGDs~~Di~aAk~AG~~~I~v~~~~~~~~~~~~~d~~i~~l~el~~~l~~~  456 (459)
T PRK06698        385 --LNKSDLVKSILNKYD--IKEAAVVGDRLSDINAAKDNGLIAIGCNFDFAQEDELAQADIVIDDLLELKGILSTV  456 (459)
T ss_pred             --CCCcHHHHHHHHhcC--cceEEEEeCCHHHHHHHHHCCCeEEEEeCCCCcccccCCCCEEeCCHHHHHHHHHHH
Confidence              778889999998865  78999999999999999999999999988753    345899999999999877553

>TIGR01509 HAD-SF-IA-v3 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED

Probab=99.72  E-value=2.1e-17  Score=134.11  Aligned_cols=97  Identities=34%  Similarity=0.558  Sum_probs=89.0

Q ss_pred             CCCChhHHHHHhcCC---CCeEEEeCCChHHHHHHHHHcCCccccceeEeeccCCCCCCCCCCCCCcccccCCccccccC
Q 027403           55 LKPDPVLRNLLLSMP---QRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILC  131 (224)
Q Consensus        55 ~~~~~g~~~~L~~l~---~~~~I~Tn~~~~~~~~~l~~lgl~~~fd~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  131 (224)
                      ++++||+.++|+.|+   ++++|+||++... ...+.++|+.++|+.++++++.+..                       
T Consensus        84 ~~~~~g~~~~l~~l~~~g~~~~i~Tn~~~~~-~~~~~~~~l~~~f~~i~~~~~~~~~-----------------------  139 (183)
T TIGR01509        84 LKPLPGVEPLLEALRARGKKLALLTNSPRDH-AVLVQELGLRDLFDVVIFSGDVGRG-----------------------  139 (183)
T ss_pred             CccCcCHHHHHHHHHHCCCeEEEEeCCchHH-HHHHHhcCCHHHCCEEEEcCCCCCC-----------------------
Confidence            689999999999996   5789999999988 6666679999999999999887764                       


Q ss_pred             CCCHHHHHHHHHHhCCCCCcEEEEeCChhcHHHHHHcCCeEEEE
Q 027403          132 KPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIV  175 (224)
Q Consensus       132 KP~~~~~~~al~~~~~~~~~~l~VgDs~~Di~~A~~~G~~~v~v  175 (224)
                      ||+|.+|..++++++++|++|++|||+..|+.+|+++|+.+|+|
T Consensus       140 KP~~~~~~~~~~~~~~~~~~~~~vgD~~~di~aA~~~G~~~i~v  183 (183)
T TIGR01509       140 KPDPDIYLLALKKLGLKPEECLFVDDSPAGIEAAKAAGMHTVLV  183 (183)
T ss_pred             CCCHHHHHHHHHHcCCCcceEEEEcCCHHHHHHHHHcCCEEEeC
Confidence            99999999999999999999999999999999999999999975

HAD subfamilies caused by an overly broad single model.

>PLN02779 haloacid dehalogenase-like hydrolase family protein

Probab=99.72  E-value=6.5e-17  Score=142.90  Aligned_cols=121  Identities=19%  Similarity=0.309  Sum_probs=102.6

Q ss_pred             CCCCChhHHHHHhcCC---CCeEEEeCCChHHHHHHHHHcCCccccce--eEeeccCCCCCCCCCCCCCcccccCCcccc
Q 027403           54 KLKPDPVLRNLLLSMP---QRKIIFTNADQKHAMEVLGRLGLEDCFEG--IICFETINPRLQPADNTDGIENNSFSSNQR  128 (224)
Q Consensus        54 ~~~~~~g~~~~L~~l~---~~~~I~Tn~~~~~~~~~l~~lgl~~~fd~--ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~  128 (224)
                      .++++||+.++|+.|+   ++++|+||++...+...+++++...+|+.  +++++++...                    
T Consensus       142 ~~~l~pGv~elL~~L~~~g~~l~IvTn~~~~~~~~~l~~~~~~~~~~~~~~v~~~~~~~~--------------------  201 (286)
T PLN02779        142 ALPLRPGVLRLMDEALAAGIKVAVCSTSNEKAVSKIVNTLLGPERAQGLDVFAGDDVPKK--------------------  201 (286)
T ss_pred             CCCchhhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhccccccCceEEEeccccCCC--------------------
Confidence            4689999999999986   68999999999999999988754344442  3367766653                    


Q ss_pred             ccCCCCHHHHHHHHHHhCCCCCcEEEEeCChhcHHHHHHcCCeEEEECCCCC----CCCCceEeCCHhHHHHH
Q 027403          129 ILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP----VPPADHALNSIHNIKEA  197 (224)
Q Consensus       129 ~~~KP~~~~~~~al~~~~~~~~~~l~VgDs~~Di~~A~~~G~~~v~v~~~~~----~~~~d~~i~~~~dl~~~  197 (224)
                         ||+|++|..+++++|++|++|+||||+.+|+++|+++|+++|++.++..    ...++++++++.++...
T Consensus       202 ---KP~p~~~~~a~~~~~~~p~~~l~IGDs~~Di~aA~~aG~~~i~v~~g~~~~~~l~~ad~vi~~~~~l~~~  271 (286)
T PLN02779        202 ---KPDPDIYNLAAETLGVDPSRCVVVEDSVIGLQAAKAAGMRCIVTKSSYTADEDFSGADAVFDCLGDVPLE  271 (286)
T ss_pred             ---CCCHHHHHHHHHHhCcChHHEEEEeCCHHhHHHHHHcCCEEEEEccCCccccccCCCcEEECChhhcchh
Confidence               9999999999999999999999999999999999999999999988753    24589999999988753

>TIGR02009 PGMB-YQAB-SF beta-phosphoglucomutase family hydrolase

Probab=99.70  E-value=5.3e-17  Score=132.56  Aligned_cols=98  Identities=27%  Similarity=0.430  Sum_probs=89.9

Q ss_pred             CCCCCChhHHHHHhcCC---CCeEEEeCCChHHHHHHHHHcCCccccceeEeeccCCCCCCCCCCCCCcccccCCccccc
Q 027403           53 EKLKPDPVLRNLLLSMP---QRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRI  129 (224)
Q Consensus        53 ~~~~~~~g~~~~L~~l~---~~~~I~Tn~~~~~~~~~l~~lgl~~~fd~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  129 (224)
                      ....++||+.++|+.|+   .+++|+||+  ..+...++++|+.++|+.++++++.+..                     
T Consensus        85 ~~~~~~~g~~~~l~~l~~~g~~i~i~S~~--~~~~~~l~~~~l~~~f~~v~~~~~~~~~---------------------  141 (185)
T TIGR02009        85 TGAEVLPGIENFLKRLKKKGIAVGLGSSS--KNADRILAKLGLTDYFDAIVDADEVKEG---------------------  141 (185)
T ss_pred             cCCCCCcCHHHHHHHHHHcCCeEEEEeCc--hhHHHHHHHcChHHHCCEeeehhhCCCC---------------------
Confidence            45789999999999996   678899998  6688899999999999999999888764                     


Q ss_pred             cCCCCHHHHHHHHHHhCCCCCcEEEEeCChhcHHHHHHcCCeEEEE
Q 027403          130 LCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIV  175 (224)
Q Consensus       130 ~~KP~~~~~~~al~~~~~~~~~~l~VgDs~~Di~~A~~~G~~~v~v  175 (224)
                        ||+|++|..++++++++|+++++|||+..|+.+|+++|+++++|
T Consensus       142 --kp~~~~~~~~~~~~~~~~~~~v~IgD~~~di~aA~~~G~~~i~v  185 (185)
T TIGR02009       142 --KPHPETFLLAAELLGVSPNECVVFEDALAGVQAARAAGMFAVAV  185 (185)
T ss_pred             --CCChHHHHHHHHHcCCCHHHeEEEeCcHhhHHHHHHCCCeEeeC
Confidence              99999999999999999999999999999999999999999875

All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509).

>TIGR02252 DREG-2 REG-2-like, HAD superfamily (subfamily IA) hydrolase

Probab=99.70  E-value=6.9e-17  Score=134.37  Aligned_cols=97  Identities=22%  Similarity=0.341  Sum_probs=88.8

Q ss_pred             CCCCChhHHHHHhcCC---CCeEEEeCCChHHHHHHHHHcCCccccceeEeeccCCCCCCCCCCCCCcccccCCcccccc
Q 027403           54 KLKPDPVLRNLLLSMP---QRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRIL  130 (224)
Q Consensus        54 ~~~~~~g~~~~L~~l~---~~~~I~Tn~~~~~~~~~l~~lgl~~~fd~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  130 (224)
                      .+.++||+.++|+.|+   ++++|+||++.. +...++++|+.++|+.++++++.+..                      
T Consensus       103 ~~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~-~~~~l~~~~l~~~fd~i~~s~~~~~~----------------------  159 (203)
T TIGR02252       103 PWQVYPDAIKLLKDLRERGLILGVISNFDSR-LRGLLEALGLLEYFDFVVTSYEVGAE----------------------  159 (203)
T ss_pred             cceeCcCHHHHHHHHHHCCCEEEEEeCCchh-HHHHHHHCCcHHhcceEEeecccCCC----------------------
Confidence            4678999999999996   678999998875 57889999999999999999988764                      


Q ss_pred             CCCCHHHHHHHHHHhCCCCCcEEEEeCCh-hcHHHHHHcCCeEEE
Q 027403          131 CKPSLEAIETAIRIANVDPKKTIFFDDSA-RNIASAKAAGLHTVI  174 (224)
Q Consensus       131 ~KP~~~~~~~al~~~~~~~~~~l~VgDs~-~Di~~A~~~G~~~v~  174 (224)
                       ||+|.+|..+++++|++|++|++|||+. +||++|+++|+++||
T Consensus       160 -KP~~~~~~~~~~~~~~~~~~~~~IgD~~~~Di~~A~~aG~~~i~  203 (203)
T TIGR02252       160 -KPDPKIFQEALERAGISPEEALHIGDSLRNDYQGARAAGWRALL  203 (203)
T ss_pred             -CCCHHHHHHHHHHcCCChhHEEEECCCchHHHHHHHHcCCeeeC
Confidence             9999999999999999999999999997 799999999999885

Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes.

>TIGR02247 HAD-1A3-hyp Epoxide hydrolase N-terminal domain-like phosphatase

Probab=99.69  E-value=1.7e-16  Score=132.97  Aligned_cols=102  Identities=22%  Similarity=0.270  Sum_probs=89.3

Q ss_pred             CCCCChhHHHHHhcCC---CCeEEEeCCChHH--HHHHHHHcCCccccceeEeeccCCCCCCCCCCCCCcccccCCcccc
Q 027403           54 KLKPDPVLRNLLLSMP---QRKIIFTNADQKH--AMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQR  128 (224)
Q Consensus        54 ~~~~~~g~~~~L~~l~---~~~~I~Tn~~~~~--~~~~l~~lgl~~~fd~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~  128 (224)
                      .+.++||+.++|+.|+   ++++|+||++...  ....+..+++.++||.++++++.+..                    
T Consensus        92 ~~~~~~~~~~~L~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~l~~~fd~v~~s~~~~~~--------------------  151 (211)
T TIGR02247        92 NTKLRPSMMAAIKTLRAKGFKTACITNNFPTDHSAEEALLPGDIMALFDAVVESCLEGLR--------------------  151 (211)
T ss_pred             ccccChhHHHHHHHHHHCCCeEEEEeCCCCccchhhhHhhhhhhHhhCCEEEEeeecCCC--------------------
Confidence            4778999999999996   6788999987643  33345567888999999999888764                    


Q ss_pred             ccCCCCHHHHHHHHHHhCCCCCcEEEEeCChhcHHHHHHcCCeEEEECCC
Q 027403          129 ILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSS  178 (224)
Q Consensus       129 ~~~KP~~~~~~~al~~~~~~~~~~l~VgDs~~Di~~A~~~G~~~v~v~~~  178 (224)
                         ||+|.+|..+++++|++|++|+||||+..|+.+|+++|++++++.++
T Consensus       152 ---KP~p~~~~~~~~~~g~~~~~~l~i~D~~~di~aA~~aG~~~i~v~~~  198 (211)
T TIGR02247       152 ---KPDPRIYQLMLERLGVAPEECVFLDDLGSNLKPAAALGITTIKVSDE  198 (211)
T ss_pred             ---CCCHHHHHHHHHHcCCCHHHeEEEcCCHHHHHHHHHcCCEEEEECCH
Confidence               99999999999999999999999999999999999999999999764

These appear to be members of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases by general homology and the conservation of all of the recognized catalytic motifs (although the first motif is unusual in the replacement of the more common aspartate with glycine...). The variable domain is found in between motifs 1 and 2, indicating membership in subfamily I and phylogeny and prediction of the alpha helical nature of the variable domain (by PSI-PRED) indicate membership in subfamily IA.

>PHA02597 30

Probab=99.69  E-value=1.5e-16  Score=132.00  Aligned_cols=116  Identities=15%  Similarity=0.152  Sum_probs=97.0

Q ss_pred             CCCCCChhHHHHHhcCC--CCeEEEeCCChHHHHHHHHHcCCcc----ccceeEeeccCCCCCCCCCCCCCcccccCCcc
Q 027403           53 EKLKPDPVLRNLLLSMP--QRKIIFTNADQKHAMEVLGRLGLED----CFEGIICFETINPRLQPADNTDGIENNSFSSN  126 (224)
Q Consensus        53 ~~~~~~~g~~~~L~~l~--~~~~I~Tn~~~~~~~~~l~~lgl~~----~fd~ii~~~~~~~~~~~~~~~~~~~~~~~~~~  126 (224)
                      ....++||+.++|+.|+  ++++++||++.......++.+++..    +|+.++++++.                     
T Consensus        71 ~~~~~~pG~~e~L~~L~~~~~~~i~Tn~~~~~~~~~~~~~~l~~~f~~~f~~i~~~~~~---------------------  129 (197)
T PHA02597         71 RYLSAYDDALDVINKLKEDYDFVAVTALGDSIDALLNRQFNLNALFPGAFSEVLMCGHD---------------------  129 (197)
T ss_pred             HhccCCCCHHHHHHHHHhcCCEEEEeCCccchhHHHHhhCCHHHhCCCcccEEEEeccC---------------------
Confidence            44679999999999997  5788999988776666777887765    45667777763                     


Q ss_pred             ccccCCCCHHHHHHHHHHhCCCCCcEEEEeCChhcHHHHHHc--CCeEEEECCCCC--CCCCceEeCCHhHHHH
Q 027403          127 QRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAA--GLHTVIVGSSVP--VPPADHALNSIHNIKE  196 (224)
Q Consensus       127 ~~~~~KP~~~~~~~al~~~~~~~~~~l~VgDs~~Di~~A~~~--G~~~v~v~~~~~--~~~~d~~i~~~~dl~~  196 (224)
                           ||+|++|..+++++|  |++++||||+..|+.+|+++  |++++++.++..  .+.++|.++|+.|+.+
T Consensus       130 -----~~kp~~~~~a~~~~~--~~~~v~vgDs~~di~aA~~a~~Gi~~i~~~~~~~~~~~~~~~~~~~~~~~~~  196 (197)
T PHA02597        130 -----ESKEKLFIKAKEKYG--DRVVCFVDDLAHNLDAAHEALSQLPVIHMLRGERDHIPKLAHRVKSWNDIEN  196 (197)
T ss_pred             -----cccHHHHHHHHHHhC--CCcEEEeCCCHHHHHHHHHHHcCCcEEEecchhhccccchhhhhccHHHHhc
Confidence                 778899999999999  89999999999999999999  999999999975  2346789999998864

2 hypothetical protein; Provisional

>PLN02919 haloacid dehalogenase-like hydrolase family protein

Probab=99.68  E-value=5e-16  Score=158.00  Aligned_cols=118  Identities=19%  Similarity=0.273  Sum_probs=108.4

Q ss_pred             CCCChhHHHHHhcCC---CCeEEEeCCChHHHHHHHHHcCCc-cccceeEeeccCCCCCCCCCCCCCcccccCCcccccc
Q 027403           55 LKPDPVLRNLLLSMP---QRKIIFTNADQKHAMEVLGRLGLE-DCFEGIICFETINPRLQPADNTDGIENNSFSSNQRIL  130 (224)
Q Consensus        55 ~~~~~g~~~~L~~l~---~~~~I~Tn~~~~~~~~~l~~lgl~-~~fd~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  130 (224)
                      ..++||+.++|+.|+   ++++|+||++...+...++++|+. .+|+.+++++++...                      
T Consensus       160 ~~~~pG~~elL~~Lk~~G~~l~IvSn~~~~~~~~~L~~~gl~~~~Fd~iv~~~~~~~~----------------------  217 (1057)
T PLN02919        160 GIGFPGALELITQCKNKGLKVAVASSADRIKVDANLAAAGLPLSMFDAIVSADAFENL----------------------  217 (1057)
T ss_pred             CccCccHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHcCCChhHCCEEEECcccccC----------------------
Confidence            357999999999997   789999999999999999999995 799999999998764                      


Q ss_pred             CCCCHHHHHHHHHHhCCCCCcEEEEeCChhcHHHHHHcCCeEEEECCCCC-----CCCCceEeCCHhHHH
Q 027403          131 CKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP-----VPPADHALNSIHNIK  195 (224)
Q Consensus       131 ~KP~~~~~~~al~~~~~~~~~~l~VgDs~~Di~~A~~~G~~~v~v~~~~~-----~~~~d~~i~~~~dl~  195 (224)
                       ||+|++|..++++++++|++|++|||+..|+++|+++|+++|++.++..     ..+++++++++.++.
T Consensus       218 -KP~Pe~~~~a~~~lgv~p~e~v~IgDs~~Di~AA~~aGm~~I~v~~~~~~~~L~~~~a~~vi~~l~el~  286 (1057)
T PLN02919        218 -KPAPDIFLAAAKILGVPTSECVVIEDALAGVQAARAAGMRCIAVTTTLSEEILKDAGPSLIRKDIGNIS  286 (1057)
T ss_pred             -CCCHHHHHHHHHHcCcCcccEEEEcCCHHHHHHHHHcCCEEEEECCCCCHHHHhhCCCCEEECChHHCC
Confidence             9999999999999999999999999999999999999999999998753     456899999999974

>TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain

Probab=99.65  E-value=4e-16  Score=124.67  Aligned_cols=101  Identities=22%  Similarity=0.286  Sum_probs=82.7

Q ss_pred             CCCChhHHHHHhcCC---CCeEEEeCCCh---------------HHHHHHHHHcCCccc--cceeEe-eccCCCCCCCCC
Q 027403           55 LKPDPVLRNLLLSMP---QRKIIFTNADQ---------------KHAMEVLGRLGLEDC--FEGIIC-FETINPRLQPAD  113 (224)
Q Consensus        55 ~~~~~g~~~~L~~l~---~~~~I~Tn~~~---------------~~~~~~l~~lgl~~~--fd~ii~-~~~~~~~~~~~~  113 (224)
                      ++++||+.++|+.|+   ++++|+||+++               ..+...++++|+...  |..+.+ ++....      
T Consensus        26 ~~~~~g~~~~l~~Lk~~g~~~~I~Sn~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~------   99 (147)
T TIGR01656        26 WQLRPGAVPALLTLRAAGYTVVVVTNQSGIGRGYFSAEAFRAPNGRVLELLRQLGVAVDGVLFCPHHPADNCSC------   99 (147)
T ss_pred             eEEcCChHHHHHHHHHCCCEEEEEeCCCcccCCcCCHHHHHHHHHHHHHHHHhCCCceeEEEECCCCCCCCCCC------
Confidence            578999999999996   78899999874               567778899998621  211111 333333      


Q ss_pred             CCCCcccccCCccccccCCCCHHHHHHHHHHhCCCCCcEEEEeCChhcHHHHHHcCCeEEEECCC
Q 027403          114 NTDGIENNSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSS  178 (224)
Q Consensus       114 ~~~~~~~~~~~~~~~~~~KP~~~~~~~al~~~~~~~~~~l~VgDs~~Di~~A~~~G~~~v~v~~~  178 (224)
                                       .||+|++|..++++++++|++|+||||+..|+++|+++|++++||.+|
T Consensus       100 -----------------~KP~~~~~~~~~~~~~~~~~e~i~IGDs~~Di~~A~~~Gi~~v~i~~~  147 (147)
T TIGR01656       100 -----------------RKPKPGLILEALKRLGVDASRSLVVGDRLRDLQAARNAGLAAVLLVDG  147 (147)
T ss_pred             -----------------CCCCHHHHHHHHHHcCCChHHEEEEcCCHHHHHHHHHCCCCEEEecCC
Confidence                             399999999999999999999999999999999999999999999865

This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3.

>TIGR01261 hisB_Nterm histidinol-phosphatase

Probab=99.64  E-value=8.1e-16  Score=125.41  Aligned_cols=101  Identities=18%  Similarity=0.378  Sum_probs=88.3

Q ss_pred             CCCCChhHHHHHhcCC---CCeEEEeCCC---------------hHHHHHHHHHcCCccccceeE-e----eccCCCCCC
Q 027403           54 KLKPDPVLRNLLLSMP---QRKIIFTNAD---------------QKHAMEVLGRLGLEDCFEGII-C----FETINPRLQ  110 (224)
Q Consensus        54 ~~~~~~g~~~~L~~l~---~~~~I~Tn~~---------------~~~~~~~l~~lgl~~~fd~ii-~----~~~~~~~~~  110 (224)
                      .++++||+.++|+.|+   ++++|+||.+               ...+...++.+|+.  |+.++ |    +++...+  
T Consensus        27 ~~~~~pgv~e~L~~L~~~g~~l~IvSN~~g~~~~~~~~~~~~~~~~~~~~~l~~~gl~--fd~ii~~~~~~~~~~~~~--  102 (161)
T TIGR01261        27 KLRFEKGVIPALLKLKKAGYKFVMVTNQDGLGTPSFPQADFDGPHNLMLQIFRSQGII--FDDVLICPHFPDDNCDCR--  102 (161)
T ss_pred             HeeECCCHHHHHHHHHHCCCeEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHCCCc--eeEEEECCCCCCCCCCCC--
Confidence            4789999999999996   6899999973               56788899999996  87665 4    3565554  


Q ss_pred             CCCCCCCcccccCCccccccCCCCHHHHHHHHHHhCCCCCcEEEEeCChhcHHHHHHcCCeEEEECCCC
Q 027403          111 PADNTDGIENNSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSV  179 (224)
Q Consensus       111 ~~~~~~~~~~~~~~~~~~~~~KP~~~~~~~al~~~~~~~~~~l~VgDs~~Di~~A~~~G~~~v~v~~~~  179 (224)
                                           ||++.+|..++++++++|++++||||+.+|+.+|+++|+.++++.++-
T Consensus       103 ---------------------KP~~~~~~~~~~~~~~~~~e~l~IGD~~~Di~~A~~aGi~~i~~~~~~  150 (161)
T TIGR01261       103 ---------------------KPKIKLLEPYLKKNLIDKARSYVIGDRETDMQLAENLGIRGIQYDEEE  150 (161)
T ss_pred             ---------------------CCCHHHHHHHHHHcCCCHHHeEEEeCCHHHHHHHHHCCCeEEEEChhh
Confidence                                 999999999999999999999999999999999999999999998763

This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis.

>TIGR01493 HAD-SF-IA-v2 Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase

Probab=99.64  E-value=4.7e-16  Score=126.33  Aligned_cols=88  Identities=19%  Similarity=0.262  Sum_probs=82.1

Q ss_pred             CCCCChhHHHHHhcCCCCeEEEeCCChHHHHHHHHHcCCccccceeEeeccCCCCCCCCCCCCCcccccCCccccccCCC
Q 027403           54 KLKPDPVLRNLLLSMPQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCKP  133 (224)
Q Consensus        54 ~~~~~~g~~~~L~~l~~~~~I~Tn~~~~~~~~~l~~lgl~~~fd~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP  133 (224)
                      .+.++||+.++|+    +++|+||++...+...++++|+.++|+.++++++++..                       ||
T Consensus        88 ~~~~~~g~~~~L~----~~~i~Tn~~~~~~~~~l~~~~l~~~fd~v~~~~~~~~~-----------------------KP  140 (175)
T TIGR01493        88 NLPPWPDSAAALA----RVAILSNASHWAFDQFAQQAGLPWYFDRAFSVDTVRAY-----------------------KP  140 (175)
T ss_pred             cCCCCCchHHHHH----HHhhhhCCCHHHHHHHHHHCCCHHHHhhhccHhhcCCC-----------------------CC
Confidence            4679999999999    47899999999999999999999999999999987764                       99


Q ss_pred             CHHHHHHHHHHhCCCCCcEEEEeCChhcHHHHHHc
Q 027403          134 SLEAIETAIRIANVDPKKTIFFDDSARNIASAKAA  168 (224)
Q Consensus       134 ~~~~~~~al~~~~~~~~~~l~VgDs~~Di~~A~~~  168 (224)
                      +|++|..+++++|++|++|+||||+.+|+.+|+++
T Consensus       141 ~p~~f~~~~~~~~~~p~~~l~vgD~~~Di~~A~~~  175 (175)
T TIGR01493       141 DPVVYELVFDTVGLPPDRVLMVAAHQWDLIGARKF  175 (175)
T ss_pred             CHHHHHHHHHHHCCCHHHeEeEecChhhHHHHhcC
Confidence            99999999999999999999999999999999864

The Subfamily IA and IB capping domains are predicted by PSI-PRED to consist of an alpha helical bundle. Subfamily I encompasses such a wide region of sequence space (the sequences are highly divergent) that modelling it with a single alignment is impossible, resulting in an overly broad description which allows in many unrelated sequences. Subfamily IA and IB are separated based on an aparrent phylogenetic bifurcation. Subfamily IA is still too broad to model, but cannot be further subdivided into large chunks based on phylogenetic trees. Of the three motifs defining the HAD superfamily, the third has three variant forms : (1) hhhhsDxxx(x)D, (2) hhhhssxxx(x)D and (3) hhhhDDxxx(x)s where _s_ refers to a small amino acid and _h_ to a hydrophobic one. All three of these variants are found in subfamily IA. Individual models were made based on seeds exhibiting only o

>TIGR01691 enolase-ppase 2,3-diketo-5-methylthio-1-phosphopentane phosphatase

Probab=99.62  E-value=2.3e-15  Score=128.65  Aligned_cols=102  Identities=18%  Similarity=0.220  Sum_probs=89.1

Q ss_pred             CCCCChhHHHHHhcCC---CCeEEEeCCChHHHHHHHHHc---CCccccceeEeeccCCCCCCCCCCCCCcccccCCccc
Q 027403           54 KLKPDPVLRNLLLSMP---QRKIIFTNADQKHAMEVLGRL---GLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQ  127 (224)
Q Consensus        54 ~~~~~~g~~~~L~~l~---~~~~I~Tn~~~~~~~~~l~~l---gl~~~fd~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~  127 (224)
                      ...++||+.++|+.|+   ++++|+||++...+...++++   ++.++|+.++.. ..+                     
T Consensus        93 ~~~lypgv~e~L~~Lk~~G~~l~I~Sn~s~~~~~~~~~~~~~~~L~~~f~~~fd~-~~g---------------------  150 (220)
T TIGR01691        93 TSHLYPDVPPALEAWLQLGLRLAVYSSGSVPAQKLLFGHSDAGNLTPYFSGYFDT-TVG---------------------  150 (220)
T ss_pred             ccCcCcCHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHhhccccchhhhcceEEEe-Ccc---------------------
Confidence            4579999999999996   678999999999888888886   677788877643 222                     


Q ss_pred             cccCCCCHHHHHHHHHHhCCCCCcEEEEeCChhcHHHHHHcCCeEEEECCCCC
Q 027403          128 RILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP  180 (224)
Q Consensus       128 ~~~~KP~~~~~~~al~~~~~~~~~~l~VgDs~~Di~~A~~~G~~~v~v~~~~~  180 (224)
                         +||+|++|..+++++|++|++|+||||+..|+.+|+++|++++++.++..
T Consensus       151 ---~KP~p~~y~~i~~~lgv~p~e~lfVgDs~~Di~AA~~AG~~ti~v~r~g~  200 (220)
T TIGR01691       151 ---LKTEAQSYVKIAGQLGSPPREILFLSDIINELDAARKAGLHTGQLVRPGN  200 (220)
T ss_pred             ---cCCCHHHHHHHHHHhCcChhHEEEEeCCHHHHHHHHHcCCEEEEEECCCC
Confidence               39999999999999999999999999999999999999999999987753

This enzyme is the enolase-phosphatase of methionine salvage, a pathway that regenerates methionine from methylthioadenosine (MTA). Adenosylmethionine (AdoMet) is a donor of different moieties for various processes, including methylation reactions. Use of AdoMet for spermidine biosynthesis, which leads to polyamine biosynthesis, leaves MTA as a by-product that must be cleared. In Bacillus subtilis and related species, this single protein is replaced by separate enzymes with enolase and phosphatase activities.

>TIGR01685 MDP-1 magnesium-dependent phosphatase-1

Probab=99.61  E-value=1.1e-15  Score=126.32  Aligned_cols=104  Identities=17%  Similarity=0.253  Sum_probs=93.0

Q ss_pred             CCCCCChhHHHHHhcCC---CCeEEEeCC-ChHHHHHHHHHcCCc---------cccceeEeeccCCCCCCCCCCCCCcc
Q 027403           53 EKLKPDPVLRNLLLSMP---QRKIIFTNA-DQKHAMEVLGRLGLE---------DCFEGIICFETINPRLQPADNTDGIE  119 (224)
Q Consensus        53 ~~~~~~~g~~~~L~~l~---~~~~I~Tn~-~~~~~~~~l~~lgl~---------~~fd~ii~~~~~~~~~~~~~~~~~~~  119 (224)
                      ....++||+.++|+.|+   .+++|+||+ +...++..++.+|+.         ++|+.++++++...            
T Consensus        42 ~~~~l~pGv~elL~~Lk~~G~~l~I~Sn~~~~~~~~~~L~~~~l~~~~~~~~~~~~Fd~iv~~~~~~~------------  109 (174)
T TIGR01685        42 TEVTLIKEVRDVLQTLKDAGTYLATASWNDVPEWAYEILGTFEITYAGKTVPMHSLFDDRIEIYKPNK------------  109 (174)
T ss_pred             CEEEEcccHHHHHHHHHHCCCEEEEEeCCCChHHHHHHHHhCCcCCCCCcccHHHhceeeeeccCCch------------
Confidence            45789999999999997   578899998 888899999999998         99999999987554            


Q ss_pred             cccCCccccccCCCCHHHHHHHHHHh--CCCCCcEEEEeCChhcHHHHHHcCCeEEEECCCC
Q 027403          120 NNSFSSNQRILCKPSLEAIETAIRIA--NVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSV  179 (224)
Q Consensus       120 ~~~~~~~~~~~~KP~~~~~~~al~~~--~~~~~~~l~VgDs~~Di~~A~~~G~~~v~v~~~~  179 (224)
                                 .||.+.++..+.+.+  +++|++|+||||+..|+.+|+++|++++++.++.
T Consensus       110 -----------~kp~~~i~~~~~~~~~~gl~p~e~l~VgDs~~di~aA~~aGi~~i~v~~g~  160 (174)
T TIGR01685       110 -----------AKQLEMILQKVNKVDPSVLKPAQILFFDDRTDNVREVWGYGVTSCYCPSGM  160 (174)
T ss_pred             -----------HHHHHHHHHHhhhcccCCCCHHHeEEEcChhHhHHHHHHhCCEEEEcCCCc
Confidence                       388888888888877  8999999999999999999999999999998875

This model represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterized as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues.

>TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA

Probab=99.58  E-value=1.1e-14  Score=113.52  Aligned_cols=95  Identities=21%  Similarity=0.347  Sum_probs=82.1

Q ss_pred             CCCChhHHHHHhcCC---CCeEEEeCCC--------hHHHHHHHHHcCCccccceeEeeccCCCCCCCCCCCCCcccccC
Q 027403           55 LKPDPVLRNLLLSMP---QRKIIFTNAD--------QKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSF  123 (224)
Q Consensus        55 ~~~~~g~~~~L~~l~---~~~~I~Tn~~--------~~~~~~~l~~lgl~~~fd~ii~~~~~~~~~~~~~~~~~~~~~~~  123 (224)
                      ..++|++.++|+.|+   ++++|+||++        ...+...++++|+.  |+.++.+.  ..                
T Consensus        24 ~~~~~~v~~~l~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~~l~~~~l~--~~~~~~~~--~~----------------   83 (132)
T TIGR01662        24 RILYPEVPDALAELKEAGYKVVIVTNQSGIGRGKFSSGRVARRLEELGVP--IDVLYACP--HC----------------   83 (132)
T ss_pred             heeCCCHHHHHHHHHHCCCEEEEEECCccccccHHHHHHHHHHHHHCCCC--EEEEEECC--CC----------------
Confidence            578999999999996   6899999999        88899999999986  33333333  23                


Q ss_pred             CccccccCCCCHHHHHHHHHHh-CCCCCcEEEEeC-ChhcHHHHHHcCCeEEEEC
Q 027403          124 SSNQRILCKPSLEAIETAIRIA-NVDPKKTIFFDD-SARNIASAKAAGLHTVIVG  176 (224)
Q Consensus       124 ~~~~~~~~KP~~~~~~~al~~~-~~~~~~~l~VgD-s~~Di~~A~~~G~~~v~v~  176 (224)
                             +||+|++|..+++++ +++|++++|||| +..|+.+|+++|+.+|++.
T Consensus        84 -------~KP~~~~~~~~~~~~~~~~~~~~v~IGD~~~~Di~~A~~~Gi~~i~~~  131 (132)
T TIGR01662        84 -------RKPKPGMFLEALKRFNEIDPEESVYVGDQDLTDLQAAKRAGLAFILVA  131 (132)
T ss_pred             -------CCCChHHHHHHHHHcCCCChhheEEEcCCCcccHHHHHHCCCeEEEee
Confidence                   399999999999999 599999999999 7899999999999999985

In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme.

>TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548

Probab=99.55  E-value=2.5e-14  Score=118.97  Aligned_cols=89  Identities=24%  Similarity=0.294  Sum_probs=80.6

Q ss_pred             CCChhHHHHHhcCC---CCeEEEeCCChHHHHHHHHHcCCccccceeEeeccCCCCCCCCCCCCCcccccCCccccccCC
Q 027403           56 KPDPVLRNLLLSMP---QRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCK  132 (224)
Q Consensus        56 ~~~~g~~~~L~~l~---~~~~I~Tn~~~~~~~~~l~~lgl~~~fd~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~K  132 (224)
                      ++.+++.++|+.|+   .+++|+||+++..+...++++|+..+|+.+++++++..                        |
T Consensus       106 ~~~~~~~~~L~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~f~~~~~~~~~~~------------------------K  161 (197)
T TIGR01548       106 ETLLTPKGLLRELHRAPKGMAVVTGRPRKDAAKFLTTHGLEILFPVQIWMEDCPP------------------------K  161 (197)
T ss_pred             ccccCHHHHHHHHHHcCCcEEEECCCCHHHHHHHHHHcCchhhCCEEEeecCCCC------------------------C
Confidence            45555688888876   68999999999999999999999999999999998763                        9


Q ss_pred             CCHHHHHHHHHHhCCCCCcEEEEeCChhcHHHHHHc
Q 027403          133 PSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAA  168 (224)
Q Consensus       133 P~~~~~~~al~~~~~~~~~~l~VgDs~~Di~~A~~~  168 (224)
                      |+|..|..++++++++|++|++|||+.+|+++|+++
T Consensus       162 P~p~~~~~~~~~~~~~~~~~i~vGD~~~Di~aA~~a  197 (197)
T TIGR01548       162 PNPEPLILAAKALGVEACHAAMVGDTVDDIITGRKA  197 (197)
T ss_pred             cCHHHHHHHHHHhCcCcccEEEEeCCHHHHHHHHhC
Confidence            999999999999999999999999999999999874

All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's.

>KOG3085 consensus Predicted hydrolase (HAD superfamily) [General function prediction only]

Probab=99.53  E-value=1.3e-14  Score=124.71  Aligned_cols=102  Identities=22%  Similarity=0.298  Sum_probs=90.6

Q ss_pred             CCCCChhHHHHHhcCCC---CeEEEeCCChHHHHHHHHHcCCccccceeEeeccCCCCCCCCCCCCCcccccCCcccccc
Q 027403           54 KLKPDPVLRNLLLSMPQ---RKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRIL  130 (224)
Q Consensus        54 ~~~~~~g~~~~L~~l~~---~~~I~Tn~~~~~~~~~l~~lgl~~~fd~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  130 (224)
                      .++..+++.++|+.++.   .++++||.+.. ....+..+|+..+||.++.|+..+..                      
T Consensus       111 ~~~~~~~~~~~lq~lR~~g~~l~iisN~d~r-~~~~l~~~~l~~~fD~vv~S~e~g~~----------------------  167 (237)
T KOG3085|consen  111 AWKYLDGMQELLQKLRKKGTILGIISNFDDR-LRLLLLPLGLSAYFDFVVESCEVGLE----------------------  167 (237)
T ss_pred             CceeccHHHHHHHHHHhCCeEEEEecCCcHH-HHHHhhccCHHHhhhhhhhhhhhccC----------------------
Confidence            56777888899999983   45688888766 44888999999999999999998876                      


Q ss_pred             CCCCHHHHHHHHHHhCCCCCcEEEEeCCh-hcHHHHHHcCCeEEEECCCC
Q 027403          131 CKPSLEAIETAIRIANVDPKKTIFFDDSA-RNIASAKAAGLHTVIVGSSV  179 (224)
Q Consensus       131 ~KP~~~~~~~al~~~~~~~~~~l~VgDs~-~Di~~A~~~G~~~v~v~~~~  179 (224)
                       ||+|.+|+.+++.+++.|++|+||||+. +|+++|+++||+++.+.++.
T Consensus       168 -KPDp~If~~al~~l~v~Pee~vhIgD~l~nD~~gA~~~G~~ailv~~~~  216 (237)
T KOG3085|consen  168 -KPDPRIFQLALERLGVKPEECVHIGDLLENDYEGARNLGWHAILVDNSI  216 (237)
T ss_pred             -CCChHHHHHHHHHhCCChHHeEEecCccccccHhHHHcCCEEEEEcccc
Confidence             9999999999999999999999999997 68999999999999998654

>TIGR01549 HAD-SF-IA-v1 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E

Probab=99.52  E-value=3.9e-14  Score=112.76  Aligned_cols=90  Identities=21%  Similarity=0.266  Sum_probs=82.1

Q ss_pred             CCCCChhHHHHHhcCC---CCeEEEeCCChHHHHHHHHHcCCccccceeEeeccCCCCCCCCCCCCCcccccCCcccccc
Q 027403           54 KLKPDPVLRNLLLSMP---QRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRIL  130 (224)
Q Consensus        54 ~~~~~~g~~~~L~~l~---~~~~I~Tn~~~~~~~~~l~~lgl~~~fd~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  130 (224)
                      ....+||+.++|+.|+   .+++|+||+++..+...++++ +..+|+.++++++.. .                      
T Consensus        62 ~~~~~~g~~e~l~~L~~~g~~~~i~T~~~~~~~~~~~~~~-l~~~f~~i~~~~~~~-~----------------------  117 (154)
T TIGR01549        62 EEAYIRGAADLLKRLKEAGIKLGIISNGSLRAQKLLLRKH-LGDYFDLILGSDEFG-A----------------------  117 (154)
T ss_pred             hheeccCHHHHHHHHHHCcCeEEEEeCCchHHHHHHHHHH-HHhcCcEEEecCCCC-C----------------------
Confidence            4556799999999995   678999999999999999998 888999999988876 4                      


Q ss_pred             CCCCHHHHHHHHHHhCCCCCcEEEEeCChhcHHHHHHcC
Q 027403          131 CKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAG  169 (224)
Q Consensus       131 ~KP~~~~~~~al~~~~~~~~~~l~VgDs~~Di~~A~~~G  169 (224)
                       ||+|++|..++++++++| +|++|||+..|+.+|+++|
T Consensus       118 -Kp~~~~~~~~~~~~~~~~-~~l~iGDs~~Di~aa~~aG  154 (154)
T TIGR01549       118 -KPEPEIFLAALESLGLPP-EVLHVGDNLNDIEGARNAG  154 (154)
T ss_pred             -CcCHHHHHHHHHHcCCCC-CEEEEeCCHHHHHHHHHcc
Confidence             999999999999999999 9999999999999999987

HAD subfamilies caused by an overly broad single model.

>TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668

Probab=99.50  E-value=2.5e-13  Score=111.29  Aligned_cols=96  Identities=19%  Similarity=0.257  Sum_probs=82.0

Q ss_pred             CCCCCChhHHHHHhcCC---CCeEEEeCCC-hHHHHHHHHHcCCccccceeEeeccCCCCCCCCCCCCCcccccCCcccc
Q 027403           53 EKLKPDPVLRNLLLSMP---QRKIIFTNAD-QKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQR  128 (224)
Q Consensus        53 ~~~~~~~g~~~~L~~l~---~~~~I~Tn~~-~~~~~~~l~~lgl~~~fd~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~  128 (224)
                      ....++|++.++|+.|+   .+++|+||++ ...+...++.+|+..++         ..                     
T Consensus        40 ~~~~~~pgv~e~L~~Lk~~g~~l~I~Sn~~~~~~~~~~~~~~gl~~~~---------~~---------------------   89 (170)
T TIGR01668        40 DHNEAYPALRDWIEELKAAGRKLLIVSNNAGEQRAKAVEKALGIPVLP---------HA---------------------   89 (170)
T ss_pred             CCCCcChhHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHHcCCEEEc---------CC---------------------
Confidence            34689999999999996   6789999998 57677777787764321         12                     


Q ss_pred             ccCCCCHHHHHHHHHHhCCCCCcEEEEeCCh-hcHHHHHHcCCeEEEECCCCC
Q 027403          129 ILCKPSLEAIETAIRIANVDPKKTIFFDDSA-RNIASAKAAGLHTVIVGSSVP  180 (224)
Q Consensus       129 ~~~KP~~~~~~~al~~~~~~~~~~l~VgDs~-~Di~~A~~~G~~~v~v~~~~~  180 (224)
                        .||+|.+|..+++++++++++|+||||+. .|+.+|+++|+.++++.++..
T Consensus        90 --~KP~p~~~~~~l~~~~~~~~~~l~IGDs~~~Di~aA~~aGi~~i~v~~g~~  140 (170)
T TIGR01668        90 --VKPPGCAFRRAHPEMGLTSEQVAVVGDRLFTDVMGGNRNGSYTILVEPLVH  140 (170)
T ss_pred             --CCCChHHHHHHHHHcCCCHHHEEEECCcchHHHHHHHHcCCeEEEEccCcC
Confidence              39999999999999999999999999998 699999999999999998864

This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family.

>TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458

Probab=99.48  E-value=4.1e-14  Score=123.19  Aligned_cols=122  Identities=14%  Similarity=0.195  Sum_probs=97.6

Q ss_pred             CChhHHHHHhcCC---CCeEEEeCCChHHHHHHHHHcCCccccceeEeeccCCCCCCCCCCCCCcccccCCccccccCCC
Q 027403           57 PDPVLRNLLLSMP---QRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCKP  133 (224)
Q Consensus        57 ~~~g~~~~L~~l~---~~~~I~Tn~~~~~~~~~l~~lgl~~~fd~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP  133 (224)
                      .++++.+++..|+   .+++|+||.+.......+..+|+..+|+.+.++.....                    ...+||
T Consensus       121 ~y~~l~~a~~~L~~~~~~~~iatn~~~~~~~~~~~~~g~g~~~~~i~~~~~~~~--------------------~~~gKP  180 (257)
T TIGR01458       121 SYQILNQAFRLLLDGAKPLLIAIGKGRYYKRKDGLALDVGPFVTALEYATDTKA--------------------TVVGKP  180 (257)
T ss_pred             CHHHHHHHHHHHHcCCCCEEEEeCCCCCCcCCCCCCCCchHHHHHHHHHhCCCc--------------------eeecCC
Confidence            3567777777775   56789999887766666667788888887665543322                    122599


Q ss_pred             CHHHHHHHHHHhCCCCCcEEEEeCCh-hcHHHHHHcCCeEEEECCCCC--------CCCCceEeCCHhHHHHHH
Q 027403          134 SLEAIETAIRIANVDPKKTIFFDDSA-RNIASAKAAGLHTVIVGSSVP--------VPPADHALNSIHNIKEAI  198 (224)
Q Consensus       134 ~~~~~~~al~~~~~~~~~~l~VgDs~-~Di~~A~~~G~~~v~v~~~~~--------~~~~d~~i~~~~dl~~~i  198 (224)
                      +|.+|..++++++++|++++||||+. .||.+|+++|+++++|.+|..        ...++++++++.++.+++
T Consensus       181 ~p~~~~~~~~~~~~~~~~~~~vGD~~~~Di~~a~~~G~~~i~v~~G~~~~~~~~~~~~~pd~~~~sl~el~~~l  254 (257)
T TIGR01458       181 SKTFFLEALRATGCEPEEAVMIGDDCRDDVGGAQDCGMRGIQVRTGKYRPSDEEKINVPPDLTCDSLPHAVDLI  254 (257)
T ss_pred             CHHHHHHHHHHhCCChhhEEEECCCcHHHHHHHHHcCCeEEEECCCCCChHHhcccCCCCCEEECCHHHHHHHH
Confidence            99999999999999999999999996 899999999999999998841        345899999999998765

This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published.

>TIGR00338 serB phosphoserine phosphatase SerB

Probab=99.48  E-value=2.3e-13  Score=114.38  Aligned_cols=130  Identities=18%  Similarity=0.226  Sum_probs=95.0

Q ss_pred             CCCCChhHHHHHhcCC---CCeEEEeCCChHHHHHHHHHcCCccccceeEeeccCCCCCCCCCCCCCcccccCCcccccc
Q 027403           54 KLKPDPVLRNLLLSMP---QRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRIL  130 (224)
Q Consensus        54 ~~~~~~g~~~~L~~l~---~~~~I~Tn~~~~~~~~~l~~lgl~~~fd~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  130 (224)
                      .++++||+.++|+.|+   .+++|+||+....+..+++.+|+..+|+..+..++...        .+    ...+ ....
T Consensus        83 ~~~~~~g~~~~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~~i~~~~~~~~~~~~~~~--------~~----~~~~-~~~~  149 (219)
T TIGR00338        83 NLPLTEGAEELVKTLKEKGYKVAVISGGFDLFAEHVKDKLGLDAAFANRLEVEDGKL--------TG----LVEG-PIVD  149 (219)
T ss_pred             cCCcCCCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCCceEeeEEEEECCEE--------EE----EecC-cccC
Confidence            3678999999999996   67899999999999999999999888865332221100        00    0000 0011


Q ss_pred             CCCCHHHHHHHHHHhCCCCCcEEEEeCChhcHHHHHHcCCeEEEECCCCCCCCCceEeC--CHhHHHH
Q 027403          131 CKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVPVPPADHALN--SIHNIKE  196 (224)
Q Consensus       131 ~KP~~~~~~~al~~~~~~~~~~l~VgDs~~Di~~A~~~G~~~v~v~~~~~~~~~d~~i~--~~~dl~~  196 (224)
                      ++|++.+|..++++++++|++|+||||+.+|+.+|+++|+..++-+.......+++++.  ++.++..
T Consensus       150 ~~~k~~~~~~~~~~~~~~~~~~i~iGDs~~Di~aa~~ag~~i~~~~~~~~~~~a~~~i~~~~~~~~~~  217 (219)
T TIGR00338       150 ASYKGKTLLILLRKEGISPENTVAVGDGANDLSMIKAAGLGIAFNAKPKLQQKADICINKKDLTDILP  217 (219)
T ss_pred             CcccHHHHHHHHHHcCCCHHHEEEEECCHHHHHHHHhCCCeEEeCCCHHHHHhchhccCCCCHHHHHh
Confidence            37899999999999999999999999999999999999998654322212345788876  5566554

Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins.

>TIGR01664 DNA-3'-Pase DNA 3'-phosphatase

Probab=99.46  E-value=1.7e-13  Score=112.16  Aligned_cols=94  Identities=20%  Similarity=0.183  Sum_probs=79.8

Q ss_pred             CChhHHHHHhcCC---CCeEEEeCCChH------------HHHHHHHHcCCccccceeEeeccCCCCCCCCCCCCCcccc
Q 027403           57 PDPVLRNLLLSMP---QRKIIFTNADQK------------HAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENN  121 (224)
Q Consensus        57 ~~~g~~~~L~~l~---~~~~I~Tn~~~~------------~~~~~l~~lgl~~~fd~ii~~~~~~~~~~~~~~~~~~~~~  121 (224)
                      ++||+.++|+.|+   ++++|+||++..            .+...++++|+.  ++.+++++....              
T Consensus        43 ~~pgv~e~L~~Lk~~G~~l~I~TN~~~~~~~~~~~~~~~~~i~~~l~~~gl~--~~~ii~~~~~~~--------------  106 (166)
T TIGR01664        43 LYPEIPAKLQELDDEGYKIVIFTNQSGIGRGKLSAESFKNKIEAFLEKLKVP--IQVLAATHAGLY--------------  106 (166)
T ss_pred             ecCCHHHHHHHHHHCCCEEEEEeCCcccccCcccHHHHHHHHHHHHHHcCCC--EEEEEecCCCCC--------------
Confidence            6899999999996   679999998763            567889999985  355666665443              


Q ss_pred             cCCccccccCCCCHHHHHHHHHHhC--CCCCcEEEEeCCh--------hcHHHHHHcCCeEEEE
Q 027403          122 SFSSNQRILCKPSLEAIETAIRIAN--VDPKKTIFFDDSA--------RNIASAKAAGLHTVIV  175 (224)
Q Consensus       122 ~~~~~~~~~~KP~~~~~~~al~~~~--~~~~~~l~VgDs~--------~Di~~A~~~G~~~v~v  175 (224)
                               .||+|.++..++++++  ++|++++||||+.        .|+++|+++|+++++-
T Consensus       107 ---------~KP~p~~~~~~~~~~~~~~~~~~~v~VGD~~~~~~~~~~~Di~aA~~aGi~~~~~  161 (166)
T TIGR01664       107 ---------RKPMTGMWEYLQSQYNSPIKMTRSFYVGDAAGRKLDFSDADIKFAKNLGLEFKYP  161 (166)
T ss_pred             ---------CCCccHHHHHHHHHcCCCCCchhcEEEECCCCCCCCCchhHHHHHHHCCCCcCCh
Confidence                     3999999999999999  9999999999996        6999999999998763

The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region.

>PF13242 Hydrolase_like: HAD-hyrolase-like; PDB: 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A 2HX1_D 2X4D_A 3HLT_C 3L1U_B

Probab=99.44  E-value=4.6e-13  Score=95.36  Aligned_cols=64  Identities=31%  Similarity=0.482  Sum_probs=59.2

Q ss_pred             CCCCHHHHHHHHHHhCCCCCcEEEEeCC-hhcHHHHHHcCCeEEEECCCCC--------CCCCceEeCCHhHH
Q 027403          131 CKPSLEAIETAIRIANVDPKKTIFFDDS-ARNIASAKAAGLHTVIVGSSVP--------VPPADHALNSIHNI  194 (224)
Q Consensus       131 ~KP~~~~~~~al~~~~~~~~~~l~VgDs-~~Di~~A~~~G~~~v~v~~~~~--------~~~~d~~i~~~~dl  194 (224)
                      +||+|.+|..+++++++++++++||||+ ..||.+|+++|+.+++|.+|..        ...++++++++.|+
T Consensus         3 gKP~p~~~~~a~~~~~~~~~~~~~VGD~~~~Di~~a~~~G~~~ilV~tG~~~~~~~~~~~~~pd~vv~~l~e~   75 (75)
T PF13242_consen    3 GKPSPGMLEQALKRLGVDPSRCVMVGDSLETDIEAAKAAGIDTILVLTGVYSPEDLEKAEHKPDYVVDDLKEA   75 (75)
T ss_dssp             STTSHHHHHHHHHHHTSGGGGEEEEESSTTTHHHHHHHTTSEEEEESSSSSCCCGHHHSSSTTSEEESSGGGH
T ss_pred             CCCcHHHHHHHHHHcCCCHHHEEEEcCCcHhHHHHHHHcCCcEEEECCCCCCHHHHhccCCCCCEEECCHHhC
Confidence            4999999999999999999999999999 7899999999999999999864        35799999999885

...

>KOG2914 consensus Predicted haloacid-halidohydrolase and related hydrolases [General function prediction only]

Probab=99.44  E-value=1e-12  Score=112.33  Aligned_cols=136  Identities=20%  Similarity=0.208  Sum_probs=110.1

Q ss_pred             CCCCHHHHHHHHhccCC--CCCCCCChhHHHHHhcCC---CCeEEEeCCChHHHHHHHHHcC-CccccceeEe--eccCC
Q 027403           35 YEFDNDEFHAFVHGKLP--YEKLKPDPVLRNLLLSMP---QRKIIFTNADQKHAMEVLGRLG-LEDCFEGIIC--FETIN  106 (224)
Q Consensus        35 ~~~~~~~~~~~~~~~~~--~~~~~~~~g~~~~L~~l~---~~~~I~Tn~~~~~~~~~l~~lg-l~~~fd~ii~--~~~~~  106 (224)
                      ...+.++|.+..+....  .....++||+.+++..|+   .++.++|++++..+...+.+++ +...|+.+++  ..++.
T Consensus        69 dp~s~ee~~~e~~~~~~~~~~~~~~~PGa~kLv~~L~~~gip~alat~s~~~~~~~k~~~~~~~~~~f~~~v~~d~~~v~  148 (222)
T KOG2914|consen   69 DPVSREEFNKEEEEILDRLFMNSILMPGAEKLVNHLKNNGIPVALATSSTSASFELKISRHEDIFKNFSHVVLGDDPEVK  148 (222)
T ss_pred             CCCCHHHHHHHHHHHHHHhccccccCCcHHHHHHHHHhCCCCeeEEecCCcccHHHHHHHhhHHHHhcCCCeecCCcccc
Confidence            45667777766554322  345788999999999997   6788999999999999999888 7888998887  44455


Q ss_pred             CCCCCCCCCCCcccccCCccccccCCCCHHHHHHHHHHhCCCC-CcEEEEeCChhcHHHHHHcCCeEEEECCCCC----C
Q 027403          107 PRLQPADNTDGIENNSFSSNQRILCKPSLEAIETAIRIANVDP-KKTIFFDDSARNIASAKAAGLHTVIVGSSVP----V  181 (224)
Q Consensus       107 ~~~~~~~~~~~~~~~~~~~~~~~~~KP~~~~~~~al~~~~~~~-~~~l~VgDs~~Di~~A~~~G~~~v~v~~~~~----~  181 (224)
                      .                       +||+|++|..+++.+|..| ++|++++|++.++++|+++|+.+|++.+...    .
T Consensus       149 ~-----------------------gKP~Pdi~l~A~~~l~~~~~~k~lVfeds~~Gv~aa~aagm~vi~v~~~~~~~~~~  205 (222)
T KOG2914|consen  149 N-----------------------GKPDPDIYLKAAKRLGVPPPSKCLVFEDSPVGVQAAKAAGMQVVGVATPDLSNLFS  205 (222)
T ss_pred             C-----------------------CCCCchHHHHHHHhcCCCCccceEEECCCHHHHHHHHhcCCeEEEecCCCcchhhh
Confidence            4                       4999999999999999998 9999999999999999999999999998432    3


Q ss_pred             CCCceEeCCHhH
Q 027403          182 PPADHALNSIHN  193 (224)
Q Consensus       182 ~~~d~~i~~~~d  193 (224)
                      ..++.++.++.+
T Consensus       206 ~~~~~~~~~~~~  217 (222)
T KOG2914|consen  206 AGATLILESLED  217 (222)
T ss_pred             hccceecccccc
Confidence            446666665544

>PHA02530 pseT polynucleotide kinase; Provisional

Probab=99.42  E-value=5.1e-13  Score=117.77  Aligned_cols=109  Identities=16%  Similarity=0.114  Sum_probs=91.1

Q ss_pred             CCCChhHHHHHhcCC---CCeEEEeCCChHHHHHHHHHcCCcc-ccceeEeeccCCCCCCCCCCCCCcccccCCcccccc
Q 027403           55 LKPDPVLRNLLLSMP---QRKIIFTNADQKHAMEVLGRLGLED-CFEGIICFETINPRLQPADNTDGIENNSFSSNQRIL  130 (224)
Q Consensus        55 ~~~~~g~~~~L~~l~---~~~~I~Tn~~~~~~~~~l~~lgl~~-~fd~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  130 (224)
                      -.++|++.++|+.|+   .+++++||++.......++++++.+ +|+.+++.+....+  -|...              .
T Consensus       186 ~~~~~~~~~~l~~l~~~g~~i~i~T~r~~~~~~~~l~~l~~~~~~f~~i~~~~~~~~~--~~~~~--------------~  249 (300)
T PHA02530        186 DKPNPMVVELVKMYKAAGYEIIVVSGRDGVCEEDTVEWLRQTDIWFDDLIGRPPDMHF--QREQG--------------D  249 (300)
T ss_pred             CCCChhHHHHHHHHHhCCCEEEEEeCCChhhHHHHHHHHHHcCCchhhhhCCcchhhh--cccCC--------------C
Confidence            368899999999996   5788999999999999999999987 99998888731100  00000              0


Q ss_pred             CCCCHHHHHHHHHHhCC-CCCcEEEEeCChhcHHHHHHcCCeEEEECCCC
Q 027403          131 CKPSLEAIETAIRIANV-DPKKTIFFDDSARNIASAKAAGLHTVIVGSSV  179 (224)
Q Consensus       131 ~KP~~~~~~~al~~~~~-~~~~~l~VgDs~~Di~~A~~~G~~~v~v~~~~  179 (224)
                      .||+|.++..++++++. ++++|++|||+.+|+.+|+++|+++++|.||.
T Consensus       250 ~kp~p~~~~~~l~~~~~~~~~~~~~vgD~~~d~~~a~~~Gi~~i~v~~g~  299 (300)
T PHA02530        250 KRPDDVVKEEIFWEKIAPKYDVLLAVDDRDQVVDMWRRIGLECWQVAPGD  299 (300)
T ss_pred             CCCcHHHHHHHHHHHhccCceEEEEEcCcHHHHHHHHHhCCeEEEecCCC
Confidence            39999999999999988 67999999999999999999999999998873

>PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional

Probab=99.40  E-value=1.5e-12  Score=118.31  Aligned_cols=100  Identities=17%  Similarity=0.328  Sum_probs=84.7

Q ss_pred             CCCCCChhHHHHHhcCC---CCeEEEeCC---------------ChHHHHHHHHHcCCccccceeEee-----ccCCCCC
Q 027403           53 EKLKPDPVLRNLLLSMP---QRKIIFTNA---------------DQKHAMEVLGRLGLEDCFEGIICF-----ETINPRL  109 (224)
Q Consensus        53 ~~~~~~~g~~~~L~~l~---~~~~I~Tn~---------------~~~~~~~~l~~lgl~~~fd~ii~~-----~~~~~~~  109 (224)
                      +.+.++||+.++|..|+   ++++|+||+               +...+...++.+|+.  |+.++.+     ++...  
T Consensus        27 ~~~~l~pGV~e~L~~Lk~~G~kL~IvTNq~g~G~~~~~~~~l~~~~~~i~~iL~~~gl~--fd~i~i~~~~~sd~~~~--  102 (354)
T PRK05446         27 DKLAFEPGVIPALLKLQKAGYKLVMVTNQDGLGTDSFPQEDFDPPHNLMMQIFESQGIK--FDEVLICPHFPEDNCSC--  102 (354)
T ss_pred             ccceECcCHHHHHHHHHhCCCeEEEEECCccccCccccHHHHhhHHHHHHHHHHHcCCc--eeeEEEeCCcCcccCCC--
Confidence            45789999999999996   679999996               355677788999984  7776533     33333  


Q ss_pred             CCCCCCCCcccccCCccccccCCCCHHHHHHHHHHhCCCCCcEEEEeCChhcHHHHHHcCCeEEEECC
Q 027403          110 QPADNTDGIENNSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGS  177 (224)
Q Consensus       110 ~~~~~~~~~~~~~~~~~~~~~~KP~~~~~~~al~~~~~~~~~~l~VgDs~~Di~~A~~~G~~~v~v~~  177 (224)
                                           +||+|.++..+++.++++|++++||||+.+|+.+|+++|++++++..
T Consensus       103 ---------------------rKP~p~~l~~a~~~l~v~~~~svmIGDs~sDi~aAk~aGi~~I~v~~  149 (354)
T PRK05446        103 ---------------------RKPKTGLVEEYLAEGAIDLANSYVIGDRETDVQLAENMGIKGIRYAR  149 (354)
T ss_pred             ---------------------CCCCHHHHHHHHHHcCCCcccEEEEcCCHHHHHHHHHCCCeEEEEEC
Confidence                                 39999999999999999999999999999999999999999999943

>PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed

Probab=99.39  E-value=3.1e-12  Score=108.35  Aligned_cols=125  Identities=12%  Similarity=0.085  Sum_probs=93.9

Q ss_pred             CCCCChhHHHHHhcCC---CCeEEEeCCChHHHHHHHHHcCCcc--cc--ceeEeeccCCCCCCCCCCCCCcccccCCcc
Q 027403           54 KLKPDPVLRNLLLSMP---QRKIIFTNADQKHAMEVLGRLGLED--CF--EGIICFETINPRLQPADNTDGIENNSFSSN  126 (224)
Q Consensus        54 ~~~~~~g~~~~L~~l~---~~~~I~Tn~~~~~~~~~l~~lgl~~--~f--d~ii~~~~~~~~~~~~~~~~~~~~~~~~~~  126 (224)
                      ..+++||+.++|+.++   .+++|+||+....+...++++ +..  ++  +..++.+....                   
T Consensus        72 ~~~l~pG~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~-~~~~~i~~n~~~~~~~~~~~-------------------  131 (219)
T PRK09552         72 TAEIREGFHEFVQFVKENNIPFYVVSGGMDFFVYPLLQGL-IPKEQIYCNGSDFSGEYITI-------------------  131 (219)
T ss_pred             CCCcCcCHHHHHHHHHHcCCeEEEECCCcHHHHHHHHHHh-CCcCcEEEeEEEecCCeeEE-------------------
Confidence            3689999999999986   688999999999999999998 643  11  22222222222                   


Q ss_pred             ccccCCCCHHH----------HHHHHHHhCCCCCcEEEEeCChhcHHHHHHcCCeEEEECCC-C----CCCCCceEeCCH
Q 027403          127 QRILCKPSLEA----------IETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSS-V----PVPPADHALNSI  191 (224)
Q Consensus       127 ~~~~~KP~~~~----------~~~al~~~~~~~~~~l~VgDs~~Di~~A~~~G~~~v~v~~~-~----~~~~~d~~i~~~  191 (224)
                          .||+|..          ...++++++.++++|+|||||.+|+.+|+++|+.++  ... .    ...-+.+.++++
T Consensus       132 ----~kp~p~~~~~~~~~~~~K~~~l~~~~~~~~~~i~iGDs~~Di~aa~~Ag~~~a--~~~l~~~~~~~~~~~~~~~~f  205 (219)
T PRK09552        132 ----TWPHPCDEHCQNHCGCCKPSLIRKLSDTNDFHIVIGDSITDLEAAKQADKVFA--RDFLITKCEELGIPYTPFETF  205 (219)
T ss_pred             ----eccCCccccccccCCCchHHHHHHhccCCCCEEEEeCCHHHHHHHHHCCccee--HHHHHHHHHHcCCCccccCCH
Confidence                3666543          247889999999999999999999999999999433  211 0    133477789999


Q ss_pred             hHHHHHHHHHHhh
Q 027403          192 HNIKEAIPEIWEG  204 (224)
Q Consensus       192 ~dl~~~i~~~~~~  204 (224)
                      .|+.+.+.++++.
T Consensus       206 ~ei~~~l~~~~~~  218 (219)
T PRK09552        206 HDVQTELKHLLEV  218 (219)
T ss_pred             HHHHHHHHHHhcc
Confidence            9999999988863

>smart00577 CPDc catalytic domain of ctd-like phosphatases

Probab=99.39  E-value=3.3e-13  Score=108.18  Aligned_cols=92  Identities=16%  Similarity=0.081  Sum_probs=83.3

Q ss_pred             CCCChhHHHHHhcCC--CCeEEEeCCChHHHHHHHHHcCCcc-ccceeEeeccCCCCCCCCCCCCCcccccCCccccccC
Q 027403           55 LKPDPVLRNLLLSMP--QRKIIFTNADQKHAMEVLGRLGLED-CFEGIICFETINPRLQPADNTDGIENNSFSSNQRILC  131 (224)
Q Consensus        55 ~~~~~g~~~~L~~l~--~~~~I~Tn~~~~~~~~~l~~lgl~~-~fd~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  131 (224)
                      +.++||+.++|+.|+  ++++|+||+++..+..+++++++.. +|+.|++++++...                       
T Consensus        44 v~l~pG~~e~L~~L~~~~~l~I~Ts~~~~~~~~il~~l~~~~~~f~~i~~~~d~~~~-----------------------  100 (148)
T smart00577       44 VKKRPGVDEFLKRASELFELVVFTAGLRMYADPVLDLLDPKKYFGYRRLFRDECVFV-----------------------  100 (148)
T ss_pred             EEECCCHHHHHHHHHhccEEEEEeCCcHHHHHHHHHHhCcCCCEeeeEEECcccccc-----------------------
Confidence            568999999999997  6789999999999999999999864 56999999988764                       


Q ss_pred             CCCHHHHHHHHHHhCCCCCcEEEEeCChhcHHHHHHcCCeE
Q 027403          132 KPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHT  172 (224)
Q Consensus       132 KP~~~~~~~al~~~~~~~~~~l~VgDs~~Di~~A~~~G~~~  172 (224)
                      ||.   |..++++++.+|++|++|||+..|+.+|.++|+..
T Consensus       101 KP~---~~k~l~~l~~~p~~~i~i~Ds~~~~~aa~~ngI~i  138 (148)
T smart00577      101 KGK---YVKDLSLLGRDLSNVIIIDDSPDSWPFHPENLIPI  138 (148)
T ss_pred             CCe---EeecHHHcCCChhcEEEEECCHHHhhcCccCEEEe
Confidence            887   99999999999999999999999999999888864

>cd01427 HAD_like Haloacid dehalogenase-like hydrolases

Probab=99.37  E-value=2.9e-12  Score=97.21  Aligned_cols=116  Identities=27%  Similarity=0.365  Sum_probs=94.3

Q ss_pred             CCCCCChhHHHHHhcCC---CCeEEEeCCChHHHHHHHHHcCCccccceeEeeccCCCCCCCCCCCCCcccccCCccccc
Q 027403           53 EKLKPDPVLRNLLLSMP---QRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRI  129 (224)
Q Consensus        53 ~~~~~~~g~~~~L~~l~---~~~~I~Tn~~~~~~~~~l~~lgl~~~fd~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  129 (224)
                      ....+++++.++|+.|+   .+++|+||+.+..+...++.+|+..+|+.+++++.....       ..............
T Consensus        21 ~~~~~~~~~~~~l~~l~~~g~~i~ivS~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-------~~~~~~~~~~~~~~   93 (139)
T cd01427          21 EELELYPGVKEALKELKEKGIKLALATNKSRREVLELLEELGLDDYFDPVITSNGAAIY-------YPKEGLFLGGGPFD   93 (139)
T ss_pred             ccCCcCcCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHHHcCCchhhhheeccchhhhh-------cccccccccccccc
Confidence            34689999999999997   578899999999999999999998889988887765431       00001112333344


Q ss_pred             cCCCCHHHHHHHHHHhCCCCCcEEEEeCChhcHHHHHHcCCeEEEE
Q 027403          130 LCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIV  175 (224)
Q Consensus       130 ~~KP~~~~~~~al~~~~~~~~~~l~VgDs~~Di~~A~~~G~~~v~v  175 (224)
                      .+||++..+..+++.++..++++++|||+.+|+..|+++|+++++|
T Consensus        94 ~~~~~~~~~~~~~~~~~~~~~~~~~igD~~~d~~~~~~~g~~~i~v  139 (139)
T cd01427          94 IGKPNPDKLLAALKLLGVDPEEVLMVGDSLNDIEMAKAAGGLGVAV  139 (139)
T ss_pred             cCCCCHHHHHHHHHHcCCChhhEEEeCCCHHHHHHHHHcCCceeeC
Confidence            4599999999999999999999999999999999999999999875

The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.

>TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family

Probab=99.36  E-value=4.7e-13  Score=117.61  Aligned_cols=118  Identities=21%  Similarity=0.224  Sum_probs=88.8

Q ss_pred             CChhHHHHHhcCC--CCeEEEeCCChHHHH-HHHHHcCCccccceeEeeccCCCCCCCCCCCCCcccccCCccccccCCC
Q 027403           57 PDPVLRNLLLSMP--QRKIIFTNADQKHAM-EVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCKP  133 (224)
Q Consensus        57 ~~~g~~~~L~~l~--~~~~I~Tn~~~~~~~-~~l~~lgl~~~fd~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP  133 (224)
                      .++++.++|..|+  ..++|+||.+..... ..+...|+..+|+.+.++....                    ....+||
T Consensus       144 ~y~~i~~~l~~L~~~g~~~i~Tn~d~~~~~~~~~~~~~~g~~~~~i~~~~g~~--------------------~~~~gKP  203 (279)
T TIGR01452       144 SYAKLREACAHLREPGCLFVATNRDPWHPLSDGSRTPGTGSLVAAIETASGRQ--------------------PLVVGKP  203 (279)
T ss_pred             CHHHHHHHHHHHhcCCCEEEEeCCCCCCCCcCCCcccChHHHHHHHHHHhCCc--------------------eeccCCC
Confidence            4789999999986  346799998875431 1233446666777654321111                    1112599


Q ss_pred             CHHHHHHHHHHhCCCCCcEEEEeCCh-hcHHHHHHcCCeEEEECCCCC--------------CCCCceEeCCHhHH
Q 027403          134 SLEAIETAIRIANVDPKKTIFFDDSA-RNIASAKAAGLHTVIVGSSVP--------------VPPADHALNSIHNI  194 (224)
Q Consensus       134 ~~~~~~~al~~~~~~~~~~l~VgDs~-~Di~~A~~~G~~~v~v~~~~~--------------~~~~d~~i~~~~dl  194 (224)
                      +|.+|..++++++++|++|+||||+. .||++|+++|+++++|.+|..              ...+|++++++.++
T Consensus       204 ~p~~~~~~~~~~~~~~~~~lmIGD~~~tDI~~A~~aGi~si~V~~G~~~~~~l~~~~~~~~~~~~Pd~~~~~l~~l  279 (279)
T TIGR01452       204 SPYMFECITENFSIDPARTLMVGDRLETDILFGHRCGMTTVLVLSGVSRLEEAQEYLAAGQHDLVPDYVVESLADL  279 (279)
T ss_pred             CHHHHHHHHHHhCCChhhEEEECCChHHHHHHHHHcCCcEEEECCCCCCHHHHHhhhcccccCCCCCEEecccccC
Confidence            99999999999999999999999996 899999999999999999853              13589999998764

This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association.

>TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal

Probab=99.35  E-value=6.3e-12  Score=103.63  Aligned_cols=111  Identities=14%  Similarity=0.115  Sum_probs=88.5

Q ss_pred             CCCCChhHHHHHhcCC---CCeEEEeCCChHHHHHHHHHcCCccccceeEeeccCCCCCCCCCCCCCcccccCCcccc--
Q 027403           54 KLKPDPVLRNLLLSMP---QRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQR--  128 (224)
Q Consensus        54 ~~~~~~g~~~~L~~l~---~~~~I~Tn~~~~~~~~~l~~lgl~~~fd~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~--  128 (224)
                      .+.++||+.++|+.|+   ++++|+||+....+...++++|+..+|+..+.+++.+..               .|...  
T Consensus        78 ~~~~~~g~~e~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~g~~~~~~~~~~~~~~g~~---------------~p~~~~~  142 (201)
T TIGR01491        78 EISLRDYAEELVRWLKEKGLKTAIVSGGIMCLAKKVAEKLNPDYVYSNELVFDEKGFI---------------QPDGIVR  142 (201)
T ss_pred             hCCCCccHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHhCCCeEEEEEEEEcCCCeE---------------ecceeeE
Confidence            3679999999999996   688999999999999999999998888776665443321               01111  


Q ss_pred             ccCCCCHHHHHHHHHHhCCCCCcEEEEeCChhcHHHHHHcCCeEEEECCCC
Q 027403          129 ILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSV  179 (224)
Q Consensus       129 ~~~KP~~~~~~~al~~~~~~~~~~l~VgDs~~Di~~A~~~G~~~v~v~~~~  179 (224)
                      +..++++.++..+++++++++++++|||||.+|+.+|+++|+.++..+.+.
T Consensus       143 ~~~~~k~~~~~~~~~~~~~~~~~~i~iGDs~~D~~~a~~ag~~~a~~~~~~  193 (201)
T TIGR01491       143 VTFDNKGEAVERLKRELNPSLTETVAVGDSKNDLPMFEVADISISLGDEGH  193 (201)
T ss_pred             EccccHHHHHHHHHHHhCCCHHHEEEEcCCHhHHHHHHhcCCeEEECCCcc
Confidence            122455678999999999999999999999999999999999877766554

This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog.

>TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family

Probab=99.35  E-value=5e-12  Score=102.04  Aligned_cols=112  Identities=19%  Similarity=0.266  Sum_probs=92.1

Q ss_pred             HHHHhcCCCCeEEEeCCChHHHHHHHHHcCCccccceeEeeccCCCCCCCCCCCCCcccccCCccccccCCCCHHHHHHH
Q 027403           62 RNLLLSMPQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCKPSLEAIETA  141 (224)
Q Consensus        62 ~~~L~~l~~~~~I~Tn~~~~~~~~~l~~lgl~~~fd~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~~~~~~~a  141 (224)
                      .+.|+.-.++++|+||++...+...++++|+..+|+.                                .||++..+..+
T Consensus        37 i~~Lk~~G~~i~IvTn~~~~~~~~~l~~~gi~~~~~~--------------------------------~~~k~~~~~~~   84 (154)
T TIGR01670        37 IRCALKSGIEVAIITGRKAKLVEDRCKTLGITHLYQG--------------------------------QSNKLIAFSDI   84 (154)
T ss_pred             HHHHHHCCCEEEEEECCCCHHHHHHHHHcCCCEEEec--------------------------------ccchHHHHHHH
Confidence            3344444478999999999999999999999877752                                18899999999


Q ss_pred             HHHhCCCCCcEEEEeCChhcHHHHHHcCCeEEEECCCCC--CCCCceEeCCHhH---HHHHHHHHHhhcC
Q 027403          142 IRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP--VPPADHALNSIHN---IKEAIPEIWEGEG  206 (224)
Q Consensus       142 l~~~~~~~~~~l~VgDs~~Di~~A~~~G~~~v~v~~~~~--~~~~d~~i~~~~d---l~~~i~~~~~~~~  206 (224)
                      ++++++++++|+||||+.+|+.+++++|+. +.+.+...  ...+++++.+...   +.+++.++++..+
T Consensus        85 ~~~~~~~~~~~~~vGDs~~D~~~~~~ag~~-~~v~~~~~~~~~~a~~i~~~~~~~g~~~~~~~~~~~~~~  153 (154)
T TIGR01670        85 LEKLALAPENVAYIGDDLIDWPVMEKVGLS-VAVADAHPLLIPRADYVTRIAGGRGAVREVCELLLLAQG  153 (154)
T ss_pred             HHHcCCCHHHEEEECCCHHHHHHHHHCCCe-EecCCcCHHHHHhCCEEecCCCCCcHHHHHHHHHHHhhC
Confidence            999999999999999999999999999997 77776644  4557888877654   7888888776543

The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved.

>PRK13582 thrH phosphoserine phosphatase; Provisional

Probab=99.34  E-value=2e-11  Score=101.47  Aligned_cols=140  Identities=12%  Similarity=0.087  Sum_probs=97.1

Q ss_pred             CCHHHHHHHHhccCCCCCCCCChhHHHHHhcCC--CCeEEEeCCChHHHHHHHHHcCCccccceeEeeccCCCCCCCCCC
Q 027403           37 FDNDEFHAFVHGKLPYEKLKPDPVLRNLLLSMP--QRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADN  114 (224)
Q Consensus        37 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~L~~l~--~~~~I~Tn~~~~~~~~~l~~lgl~~~fd~ii~~~~~~~~~~~~~~  114 (224)
                      ++.+++...+.      .++++||+.++|..|+  ++++|+||+....+...++++|+..+|+..+..++-...      
T Consensus        55 ~~~~~i~~~~~------~~~~~pg~~e~L~~L~~~~~~~IvS~~~~~~~~~~l~~~gl~~~f~~~~~~~~~~~i------  122 (205)
T PRK13582         55 LGLADIQEVIA------TLDPLPGAVEFLDWLRERFQVVILSDTFYEFAGPLMRQLGWPTLFCHSLEVDEDGMI------  122 (205)
T ss_pred             CCHHHHHHHHH------hCCCCCCHHHHHHHHHhcCCEEEEeCCcHHHHHHHHHHcCCchhhcceEEECCCCeE------
Confidence            45555544433      3678999999999997  678899999999999999999999888765443221100      


Q ss_pred             CCCcccccCCccccccCCCCHHHHHHHHHHhCCCCCcEEEEeCChhcHHHHHHcCCeEEEECCCCC--CCCCce-EeCCH
Q 027403          115 TDGIENNSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP--VPPADH-ALNSI  191 (224)
Q Consensus       115 ~~~~~~~~~~~~~~~~~KP~~~~~~~al~~~~~~~~~~l~VgDs~~Di~~A~~~G~~~v~v~~~~~--~~~~d~-~i~~~  191 (224)
                               .+.    .+|.|.....++++++..+++|++||||.+|+.+|+++|+.. .+..+..  ...+++ +++++
T Consensus       123 ---------~~~----~~~~p~~k~~~l~~~~~~~~~~v~iGDs~~D~~~~~aa~~~v-~~~~~~~~~~~~~~~~~~~~~  188 (205)
T PRK13582        123 ---------TGY----DLRQPDGKRQAVKALKSLGYRVIAAGDSYNDTTMLGEADAGI-LFRPPANVIAEFPQFPAVHTY  188 (205)
T ss_pred             ---------ECc----cccccchHHHHHHHHHHhCCeEEEEeCCHHHHHHHHhCCCCE-EECCCHHHHHhCCcccccCCH
Confidence                     000    022233345556666767799999999999999999999854 4443321  223454 89999


Q ss_pred             hHHHHHHHHHH
Q 027403          192 HNIKEAIPEIW  202 (224)
Q Consensus       192 ~dl~~~i~~~~  202 (224)
                      .+|.+++....
T Consensus       189 ~el~~~l~~~~  199 (205)
T PRK13582        189 DELLAAIDKAS  199 (205)
T ss_pred             HHHHHHHHHHH
Confidence            99988776543

>COG0647 NagD Predicted sugar phosphatases of the HAD superfamily [Carbohydrate transport and metabolism]

Probab=99.32  E-value=3.2e-12  Score=112.20  Aligned_cols=149  Identities=19%  Similarity=0.238  Sum_probs=110.0

Q ss_pred             CCCCCChhHHHHHhcCC---CCeEEEeCCCh---HHHHHHHHH-cCCccccceeEeeccCCCCCC----C--C-------
Q 027403           53 EKLKPDPVLRNLLLSMP---QRKIIFTNADQ---KHAMEVLGR-LGLEDCFEGIICFETINPRLQ----P--A-------  112 (224)
Q Consensus        53 ~~~~~~~g~~~~L~~l~---~~~~I~Tn~~~---~~~~~~l~~-lgl~~~fd~ii~~~~~~~~~~----~--~-------  112 (224)
                      .+-+++||+.++|++|+   .+++++||++.   ..+...|.. .++....+.|++|........    |  +       
T Consensus        21 ~G~~~ipga~e~l~~L~~~g~~~iflTNn~~~s~~~~~~~L~~~~~~~~~~~~i~TS~~at~~~l~~~~~~~kv~viG~~  100 (269)
T COG0647          21 RGNEAIPGAAEALKRLKAAGKPVIFLTNNSTRSREVVAARLSSLGGVDVTPDDIVTSGDATADYLAKQKPGKKVYVIGEE  100 (269)
T ss_pred             eCCccCchHHHHHHHHHHcCCeEEEEeCCCCCCHHHHHHHHHhhcCCCCCHHHeecHHHHHHHHHHhhCCCCEEEEECCc
Confidence            56789999999999886   67889999875   345566666 555566666766644322111    1  1       


Q ss_pred             -----------------------------------------------------------------CCCCCcc-----ccc
Q 027403          113 -----------------------------------------------------------------DNTDGIE-----NNS  122 (224)
Q Consensus       113 -----------------------------------------------------------------~~~~~~~-----~~~  122 (224)
                                                                                       ..++-|+     -+.
T Consensus       101 ~l~~~l~~~G~~~~~~~~~~~~d~Vv~g~d~~~~~e~l~~a~~~i~~g~~fI~tNpD~~~p~~~g~~pgaGai~~~~~~~  180 (269)
T COG0647         101 GLKEELEGAGFELVDEEEPARVDAVVVGLDRTLTYEKLAEALLAIAAGAPFIATNPDLTVPTERGLRPGAGAIAALLEQA  180 (269)
T ss_pred             chHHHHHhCCcEEeccCCCCcccEEEEecCCCCCHHHHHHHHHHHHcCCcEEEeCCCccccCCCCCccCcHHHHHHHHHh
Confidence                                                                             1111111     122


Q ss_pred             CCccccccCCCCHHHHHHHHHHhCCCCCcEEEEeCCh-hcHHHHHHcCCeEEEECCCCC--------CCCCceEeCCHhH
Q 027403          123 FSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSA-RNIASAKAAGLHTVIVGSSVP--------VPPADHALNSIHN  193 (224)
Q Consensus       123 ~~~~~~~~~KP~~~~~~~al~~~~~~~~~~l~VgDs~-~Di~~A~~~G~~~v~v~~~~~--------~~~~d~~i~~~~d  193 (224)
                      ++......|||++.+|+.+++.++.++++++||||+. .||.+|+++|+.++.|.+|..        ...++|+++|+.+
T Consensus       181 tg~~~~~~GKP~~~i~~~al~~~~~~~~~~~mVGD~~~TDI~~a~~~G~~t~LV~TGv~~~~~~~~~~~~p~~v~~sl~~  260 (269)
T COG0647         181 TGREPTVIGKPSPAIYEAALEKLGLDRSEVLMVGDRLDTDILGAKAAGLDTLLVLTGVSSAEDLDRAEVKPTYVVDSLAE  260 (269)
T ss_pred             hCCcccccCCCCHHHHHHHHHHhCCCcccEEEEcCCchhhHHHHHHcCCCEEEEccCCCChhhhhhhccCCcchHhhHHH
Confidence            2333358899999999999999999999999999998 599999999999999999964        3458999999999


Q ss_pred             HHHHHHHH
Q 027403          194 IKEAIPEI  201 (224)
Q Consensus       194 l~~~i~~~  201 (224)
                      +...+..+
T Consensus       261 ~~~~~~~~  268 (269)
T COG0647         261 LITALKEL  268 (269)
T ss_pred             HHhhhhcc
Confidence            98776543

>PLN02954 phosphoserine phosphatase

Probab=99.32  E-value=1.6e-11  Score=103.47  Aligned_cols=131  Identities=15%  Similarity=0.199  Sum_probs=93.1

Q ss_pred             CCCChhHHHHHhcCC---CCeEEEeCCChHHHHHHHHHcCCc--cccceeEeeccCCCCCCCCCCCCCcccccCCccccc
Q 027403           55 LKPDPVLRNLLLSMP---QRKIIFTNADQKHAMEVLGRLGLE--DCFEGIICFETINPRLQPADNTDGIENNSFSSNQRI  129 (224)
Q Consensus        55 ~~~~~g~~~~L~~l~---~~~~I~Tn~~~~~~~~~l~~lgl~--~~fd~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  129 (224)
                      ..++||+.++|+.++   .+++|+||+....+...++.+|+.  .+|+..+..+.-+.        ..+.+.   .....
T Consensus        83 ~~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~~l~~~gi~~~~~~~~~~~~~~~g~--------~~g~~~---~~~~~  151 (224)
T PLN02954         83 PRLSPGIPELVKKLRARGTDVYLVSGGFRQMIAPVAAILGIPPENIFANQILFGDSGE--------YAGFDE---NEPTS  151 (224)
T ss_pred             CCCCccHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHhCCChhhEEEeEEEEcCCCc--------EECccC---CCccc
Confidence            568999999999996   578899999999999999999996  46654222211000        000000   00001


Q ss_pred             cCCCCHHHHHHHHHHhCCCCCcEEEEeCChhcHHHHHHcCCeEEEECCCCC-----CCCCceEeCCHhHHHHHH
Q 027403          130 LCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP-----VPPADHALNSIHNIKEAI  198 (224)
Q Consensus       130 ~~KP~~~~~~~al~~~~~~~~~~l~VgDs~~Di~~A~~~G~~~v~v~~~~~-----~~~~d~~i~~~~dl~~~i  198 (224)
                      .++|+|.++..+++.++.  ++|++|||+.+|+.+|+++|+.++....+..     ..+++++++++.+|.+++
T Consensus       152 ~~~~K~~~i~~~~~~~~~--~~~i~iGDs~~Di~aa~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~el~~~~  223 (224)
T PLN02954        152 RSGGKAEAVQHIKKKHGY--KTMVMIGDGATDLEARKPGGADLFIGYGGVQVREAVAAKADWFVTDFQDLIEVL  223 (224)
T ss_pred             CCccHHHHHHHHHHHcCC--CceEEEeCCHHHHHhhhcCCCCEEEecCCCccCHHHHhcCCEEECCHHHHHHhh
Confidence            237788999999998874  6899999999999999998888665433221     335899999999998754

>TIGR01672 AphA HAD superfamily (subfamily IIIB) phosphatase, TIGR01672

Probab=99.32  E-value=2e-11  Score=105.46  Aligned_cols=109  Identities=17%  Similarity=0.145  Sum_probs=86.5

Q ss_pred             HHHHHHhccCCCCCCCCChhHHHHHhcCC---CCeEEEeCC----ChHHHHHHHHHcCCccccceeEeeccCCCCCCCCC
Q 027403           41 EFHAFVHGKLPYEKLKPDPVLRNLLLSMP---QRKIIFTNA----DQKHAMEVLGRLGLEDCFEGIICFETINPRLQPAD  113 (224)
Q Consensus        41 ~~~~~~~~~~~~~~~~~~~g~~~~L~~l~---~~~~I~Tn~----~~~~~~~~l~~lgl~~~fd~ii~~~~~~~~~~~~~  113 (224)
                      .++..+..... ....+.+++.++|+.++   .+++++||+    +...+..+++++|+.++|+.++++++....     
T Consensus       100 ~~w~~~~~~~~-~~s~p~~~a~elL~~l~~~G~~i~iVTnr~~~k~~~~a~~ll~~lGi~~~f~~i~~~d~~~~~-----  173 (237)
T TIGR01672       100 VFWEKVNNGWD-EFSIPKEVARQLIDMHQRRGDAIFFVTGRTPGKTDTVSKTLAKNFHIPAMNPVIFAGDKPGQY-----  173 (237)
T ss_pred             HHHHHHHHhcc-cCCcchhHHHHHHHHHHHCCCEEEEEeCCCCCcCHHHHHHHHHHhCCchheeEEECCCCCCCC-----
Confidence            45555543332 33467788999999996   578899998    666888889999999999988888876543     


Q ss_pred             CCCCcccccCCccccccCCCCHHHHHHHHHHhCCCCCcEEEEeCChhcHHHHHHcCCeEEEECCCCC
Q 027403          114 NTDGIENNSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP  180 (224)
Q Consensus       114 ~~~~~~~~~~~~~~~~~~KP~~~~~~~al~~~~~~~~~~l~VgDs~~Di~~A~~~G~~~v~v~~~~~  180 (224)
                                        ||++.   .++++.++    ++||||+.+|+.+|+++|++++.+.++..
T Consensus       174 ------------------Kp~~~---~~l~~~~i----~i~vGDs~~DI~aAk~AGi~~I~V~~g~~  215 (237)
T TIGR01672       174 ------------------QYTKT---QWIQDKNI----RIHYGDSDNDITAAKEAGARGIRILRASN  215 (237)
T ss_pred             ------------------CCCHH---HHHHhCCC----eEEEeCCHHHHHHHHHCCCCEEEEEecCC
Confidence                              88775   35566665    79999999999999999999999988754

Supporting evidence for the inclusion in the HAD superfamily, whose phosphatase members are magnesium dependent, is the inhibition by EDTA and calcium ions, and stimulation by magnesium ion.

>PLN02645 phosphoglycolate phosphatase

Probab=99.31  E-value=3e-12  Score=114.39  Aligned_cols=110  Identities=17%  Similarity=0.143  Sum_probs=86.6

Q ss_pred             CCeEEEeCCChHH-HHHHHHHcCCccccceeEeeccCCCCCCCCCCCCCcccccCCccccccCCCCHHHHHHHHHHhCCC
Q 027403           70 QRKIIFTNADQKH-AMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCKPSLEAIETAIRIANVD  148 (224)
Q Consensus        70 ~~~~I~Tn~~~~~-~~~~l~~lgl~~~fd~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~~~~~~~al~~~~~~  148 (224)
                      ...+|+||.+... ....+...|...+|+.+.++.....                    ...+||+|.+|..++++++++
T Consensus       187 g~~~i~tn~d~~~~~~~~~~~~g~g~~~~~i~~~~~~~~--------------------~~~gKP~p~~~~~a~~~~~~~  246 (311)
T PLN02645        187 GCLFIATNRDAVTHLTDAQEWAGAGSMVGAIKGSTEREP--------------------LVVGKPSTFMMDYLANKFGIE  246 (311)
T ss_pred             CCEEEEeCCCCCCCCCCCCCccchHHHHHHHHHHhCCCc--------------------ccCCCChHHHHHHHHHHcCCC
Confidence            4577999988643 2233345677778887766554322                    123599999999999999999


Q ss_pred             CCcEEEEeCCh-hcHHHHHHcCCeEEEECCCCC------C----CCCceEeCCHhHHHHHHH
Q 027403          149 PKKTIFFDDSA-RNIASAKAAGLHTVIVGSSVP------V----PPADHALNSIHNIKEAIP  199 (224)
Q Consensus       149 ~~~~l~VgDs~-~Di~~A~~~G~~~v~v~~~~~------~----~~~d~~i~~~~dl~~~i~  199 (224)
                      +++++||||+. .||.+|+++|+++++|.+|..      .    ..++++++++.+|.+++.
T Consensus       247 ~~~~~~VGD~~~~Di~~A~~aG~~~ilV~~G~~~~~~~~~~~~~~~pd~~~~~~~~l~~~~~  308 (311)
T PLN02645        247 KSQICMVGDRLDTDILFGQNGGCKTLLVLSGVTSESMLLSPENKIQPDFYTSKISDFLTLKA  308 (311)
T ss_pred             cccEEEEcCCcHHHHHHHHHcCCCEEEEcCCCCCHHHHHhccCCCCCCEEECCHHHHHHHhh
Confidence            99999999997 899999999999999988853      1    468999999999987654

>TIGR01457 HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydrolase, TIGR01457

Probab=99.28  E-value=1e-11  Score=107.68  Aligned_cols=69  Identities=20%  Similarity=0.328  Sum_probs=60.5

Q ss_pred             cccccCCCCHHHHHHHHHHhCCCCCcEEEEeCCh-hcHHHHHHcCCeEEEECCCCC------C--CCCceEeCCHhHH
Q 027403          126 NQRILCKPSLEAIETAIRIANVDPKKTIFFDDSA-RNIASAKAAGLHTVIVGSSVP------V--PPADHALNSIHNI  194 (224)
Q Consensus       126 ~~~~~~KP~~~~~~~al~~~~~~~~~~l~VgDs~-~Di~~A~~~G~~~v~v~~~~~------~--~~~d~~i~~~~dl  194 (224)
                      .....+||+|.+|+.+++.+++++++++||||+. .||.+|+++|+++++|.+|..      .  ..++++++++.++
T Consensus       172 ~~~~~gKP~~~~~~~~~~~~~~~~~~~~~VGD~~~~Di~~a~~~G~~~v~v~~G~~~~~~~~~~~~~pd~~v~~l~~~  249 (249)
T TIGR01457       172 KPVYIGKPNAIIMEKAVEHLGTEREETLMVGDNYLTDIRAGIDAGIDTLLVHTGVTKAEEVAGLPIAPTHVVSSLAEW  249 (249)
T ss_pred             CccccCCChHHHHHHHHHHcCCCcccEEEECCCchhhHHHHHHcCCcEEEEcCCCCCHHHHhcCCCCCCEEeCChhhC
Confidence            4455679999999999999999999999999997 799999999999999999853      1  4589999988764

This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in this model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those.

>COG0241 HisB Histidinol phosphatase and related phosphatases [Amino acid transport and metabolism]

Probab=99.27  E-value=9.9e-11  Score=97.13  Aligned_cols=125  Identities=19%  Similarity=0.324  Sum_probs=100.8

Q ss_pred             CCCCCChhHHHHHhcCC---CCeEEEeCCC---------------hHHHHHHHHHcCCccccceeEeeccCCCCCCCCCC
Q 027403           53 EKLKPDPVLRNLLLSMP---QRKIIFTNAD---------------QKHAMEVLGRLGLEDCFEGIICFETINPRLQPADN  114 (224)
Q Consensus        53 ~~~~~~~g~~~~L~~l~---~~~~I~Tn~~---------------~~~~~~~l~~lgl~~~fd~ii~~~~~~~~~~~~~~  114 (224)
                      +.+...||+.++|+.++   ++++|+||.+               +..+...|+..|.  .||.|..+-+.+.       
T Consensus        28 ~~~~~~~g~i~al~~l~~~gy~lVvvTNQsGi~rgyf~~~~f~~~~~~m~~~l~~~gv--~id~i~~Cph~p~-------   98 (181)
T COG0241          28 DDFQFIPGVIPALLKLQRAGYKLVVVTNQSGIGRGYFTEADFDKLHNKMLKILASQGV--KIDGILYCPHHPE-------   98 (181)
T ss_pred             HHhccCccHHHHHHHHHhCCCeEEEEECCCCccccCccHHHHHHHHHHHHHHHHHcCC--ccceEEECCCCCC-------
Confidence            34778899999999985   8999999954               3467777888776  5898887766654       


Q ss_pred             CCCcccccCCccccccCCCCHHHHHHHHHHhCCCCCcEEEEeCChhcHHHHHHcCCeEEEECCCCCC-----CCCceEeC
Q 027403          115 TDGIENNSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVPV-----PPADHALN  189 (224)
Q Consensus       115 ~~~~~~~~~~~~~~~~~KP~~~~~~~al~~~~~~~~~~l~VgDs~~Di~~A~~~G~~~v~v~~~~~~-----~~~d~~i~  189 (224)
                           ++|.|      +||++.++..++++.++++++.++|||...|+++|.++|+..+.+.++...     ...+..++
T Consensus        99 -----~~c~c------RKP~~gm~~~~~~~~~iD~~~s~~VGD~~~Dlq~a~n~gi~~~~~~~~~~~~~~~~~~~~~~~~  167 (181)
T COG0241          99 -----DNCDC------RKPKPGMLLSALKEYNIDLSRSYVVGDRLTDLQAAENAGIKGVLVLTGIGVTTDGAGRAKWVFD  167 (181)
T ss_pred             -----CCCcc------cCCChHHHHHHHHHhCCCccceEEecCcHHHHHHHHHCCCCceEEEcCcccccccccccccccc
Confidence                 23444      699999999999999999999999999999999999999998888777542     23567788


Q ss_pred             CHhHHHHH
Q 027403          190 SIHNIKEA  197 (224)
Q Consensus       190 ~~~dl~~~  197 (224)
                      ++.++..+
T Consensus       168 ~~~~~~~~  175 (181)
T COG0241         168 SLAEFANL  175 (181)
T ss_pred             cHHHHHHH
Confidence            88777743

>TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC

Probab=99.26  E-value=7.9e-12  Score=97.95  Aligned_cols=85  Identities=19%  Similarity=0.182  Sum_probs=75.1

Q ss_pred             CCChhHHHHHhcCC---CCeEEEeCC-ChHHHHHHHHHcC-------CccccceeEeeccCCCCCCCCCCCCCcccccCC
Q 027403           56 KPDPVLRNLLLSMP---QRKIIFTNA-DQKHAMEVLGRLG-------LEDCFEGIICFETINPRLQPADNTDGIENNSFS  124 (224)
Q Consensus        56 ~~~~g~~~~L~~l~---~~~~I~Tn~-~~~~~~~~l~~lg-------l~~~fd~ii~~~~~~~~~~~~~~~~~~~~~~~~  124 (224)
                      +++||+.++|+.|+   ++++|+||+ +...+...+++++       +.++|+.++++++                    
T Consensus        29 ~~~~gv~e~L~~Lk~~g~~l~i~Sn~~~~~~~~~~l~~~~~~~~i~~l~~~f~~~~~~~~--------------------   88 (128)
T TIGR01681        29 VTIKEIRDKLQTLKKNGFLLALASYNDDPHVAYELLKIFEDFGIIFPLAEYFDPLTIGYW--------------------   88 (128)
T ss_pred             HHHHHHHHHHHHHHHCCeEEEEEeCCCCHHHHHHHHHhccccccchhhHhhhhhhhhcCC--------------------
Confidence            47999999999996   678899999 8888888899998       7889998887753                    


Q ss_pred             ccccccCCCCHHHHHHHHHHhC--CCCCcEEEEeCChhcHHHHHH
Q 027403          125 SNQRILCKPSLEAIETAIRIAN--VDPKKTIFFDDSARNIASAKA  167 (224)
Q Consensus       125 ~~~~~~~KP~~~~~~~al~~~~--~~~~~~l~VgDs~~Di~~A~~  167 (224)
                             +|+|.+|..+++++|  ++|++|+||||+..|+...++
T Consensus        89 -------~pkp~~~~~a~~~lg~~~~p~~~l~igDs~~n~~~~~~  126 (128)
T TIGR01681        89 -------LPKSPRLVEIALKLNGVLKPKSILFVDDRPDNNEEVDY  126 (128)
T ss_pred             -------CcHHHHHHHHHHHhcCCCCcceEEEECCCHhHHHHHHh
Confidence                   789999999999999  999999999999999877654

No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC.

>PRK11009 aphA acid phosphatase/phosphotransferase; Provisional

Probab=99.26  E-value=9.6e-11  Score=101.26  Aligned_cols=110  Identities=16%  Similarity=0.208  Sum_probs=86.9

Q ss_pred             CHHHHHHHHhccCCCCCCCCChhHHHHHhcCC---CCeEEEeCCC----hHHHHHHHHHcCC--ccccceeEeeccCCCC
Q 027403           38 DNDEFHAFVHGKLPYEKLKPDPVLRNLLLSMP---QRKIIFTNAD----QKHAMEVLGRLGL--EDCFEGIICFETINPR  108 (224)
Q Consensus        38 ~~~~~~~~~~~~~~~~~~~~~~g~~~~L~~l~---~~~~I~Tn~~----~~~~~~~l~~lgl--~~~fd~ii~~~~~~~~  108 (224)
                      +..+|+..+..... ....|+||+.++|+.++   .+++++||++    ...+..+++.+|+  .++|+.+++.++.  .
T Consensus        97 ~~~~fw~~y~~~~~-~~a~p~~Ga~elL~~L~~~G~~I~iVTnR~~~k~~~t~~~Llk~~gip~~~~f~vil~gd~~--~  173 (237)
T PRK11009         97 KNQKFWEKMNNGWD-EFSIPKEVARQLIDMHVKRGDSIYFITGRTATKTETVSKTLADDFHIPADNMNPVIFAGDKP--G  173 (237)
T ss_pred             ChHHHHHHHHhccc-ccCcchHHHHHHHHHHHHCCCeEEEEeCCCCcccHHHHHHHHHHcCCCcccceeEEEcCCCC--C
Confidence            46678887766432 34779999999999995   6789999965    3456666777999  8899888877653  2


Q ss_pred             CCCCCCCCCcccccCCccccccCCCCHHHHHHHHHHhCCCCCcEEEEeCChhcHHHHHHcCCeEEEECCCCC
Q 027403          109 LQPADNTDGIENNSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP  180 (224)
Q Consensus       109 ~~~~~~~~~~~~~~~~~~~~~~~KP~~~~~~~al~~~~~~~~~~l~VgDs~~Di~~A~~~G~~~v~v~~~~~  180 (224)
                                             ||++..   .++++++    ++||||+.+|+.+|+++|++++.+.|+..
T Consensus       174 -----------------------K~~K~~---~l~~~~i----~I~IGDs~~Di~aA~~AGi~~I~v~~G~~  215 (237)
T PRK11009        174 -----------------------QYTKTQ---WLKKKNI----RIFYGDSDNDITAAREAGARGIRILRAAN  215 (237)
T ss_pred             -----------------------CCCHHH---HHHhcCC----eEEEcCCHHHHHHHHHcCCcEEEEecCCC
Confidence                                   777754   5556665    89999999999999999999999999854

>TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein

Probab=99.22  E-value=1e-10  Score=98.81  Aligned_cols=141  Identities=10%  Similarity=0.091  Sum_probs=99.4

Q ss_pred             CCCHHHHHHHHhccCCCCCCCCChhHHHHHhcCC--CCeEEEeCCChHHHHHHHHHcCCccccceeEeeccCCCCCCCCC
Q 027403           36 EFDNDEFHAFVHGKLPYEKLKPDPVLRNLLLSMP--QRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPAD  113 (224)
Q Consensus        36 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~L~~l~--~~~~I~Tn~~~~~~~~~l~~lgl~~~fd~ii~~~~~~~~~~~~~  113 (224)
                      +.+.+++...+.      .++++||+.++|..++  .+++|+||+....+..+++++|+..+|..-+..++.+..     
T Consensus        54 g~~~~~i~~~~~------~i~l~pga~ell~~lk~~~~~~IVS~~~~~~~~~il~~lgi~~~~an~l~~~~~g~~-----  122 (203)
T TIGR02137        54 GLKLGDIQEVIA------TLKPLEGAVEFVDWLRERFQVVILSDTFYEFSQPLMRQLGFPTLLCHKLEIDDSDRV-----  122 (203)
T ss_pred             CCCHHHHHHHHH------hCCCCccHHHHHHHHHhCCeEEEEeCChHHHHHHHHHHcCCchhhceeeEEecCCee-----
Confidence            455566655443      2678999999999886  688999999999999999999998888632211110000     


Q ss_pred             CCCCcccccCCccccccCCCCHHHHHHHHHHhCCCCCcEEEEeCChhcHHHHHHcCCeEEEECCCCCC-CCCc-eEeCCH
Q 027403          114 NTDGIENNSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVPV-PPAD-HALNSI  191 (224)
Q Consensus       114 ~~~~~~~~~~~~~~~~~~KP~~~~~~~al~~~~~~~~~~l~VgDs~~Di~~A~~~G~~~v~v~~~~~~-~~~d-~~i~~~  191 (224)
                                .+. ....||.+..+...+++.+.   ++++||||.+|+..+..+|...++...+.-. .-++ -++.++
T Consensus       123 ----------tG~-~~~~~~~K~~~l~~l~~~~~---~~v~vGDs~nDl~ml~~Ag~~ia~~ak~~~~~~~~~~~~~~~~  188 (203)
T TIGR02137       123 ----------VGY-QLRQKDPKRQSVIAFKSLYY---RVIAAGDSYNDTTMLSEAHAGILFHAPENVIREFPQFPAVHTY  188 (203)
T ss_pred             ----------ECe-eecCcchHHHHHHHHHhhCC---CEEEEeCCHHHHHHHHhCCCCEEecCCHHHHHhCCCCCcccCH
Confidence                      000 00126666666666666663   7999999999999999999998888777542 2233 368889


Q ss_pred             hHHHHHHHHH
Q 027403          192 HNIKEAIPEI  201 (224)
Q Consensus       192 ~dl~~~i~~~  201 (224)
                      .+|.+.+.+.
T Consensus       189 ~~~~~~~~~~  198 (203)
T TIGR02137       189 EDLKREFLKA  198 (203)
T ss_pred             HHHHHHHHHH
Confidence            9998877654

This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338).

>PRK11133 serB phosphoserine phosphatase; Provisional

Probab=99.21  E-value=5.4e-11  Score=107.08  Aligned_cols=121  Identities=15%  Similarity=0.139  Sum_probs=93.4

Q ss_pred             CCCCChhHHHHHhcCC---CCeEEEeCCChHHHHHHHHHcCCccccce-------eEeeccCCCCCCCCCCCCCcccccC
Q 027403           54 KLKPDPVLRNLLLSMP---QRKIIFTNADQKHAMEVLGRLGLEDCFEG-------IICFETINPRLQPADNTDGIENNSF  123 (224)
Q Consensus        54 ~~~~~~g~~~~L~~l~---~~~~I~Tn~~~~~~~~~l~~lgl~~~fd~-------ii~~~~~~~~~~~~~~~~~~~~~~~  123 (224)
                      .++++||+.++|+.|+   ++++|+||+....+...++++|+...+..       .+++...+.                
T Consensus       179 ~l~l~pGa~elL~~Lk~~G~~~aIvSgg~~~~~~~l~~~Lgld~~~an~lei~dg~ltg~v~g~----------------  242 (322)
T PRK11133        179 NLPLMPGLTELVLKLQALGWKVAIASGGFTYFADYLRDKLRLDAAVANELEIMDGKLTGNVLGD----------------  242 (322)
T ss_pred             hCCCChhHHHHHHHHHHcCCEEEEEECCcchhHHHHHHHcCCCeEEEeEEEEECCEEEeEecCc----------------
Confidence            4779999999999987   68899999999888899999998654432       222221110                


Q ss_pred             CccccccCCCCHHHHHHHHHHhCCCCCcEEEEeCChhcHHHHHHcCCeEEEECCCCCCCCCceEeCCHhHHH
Q 027403          124 SSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVPVPPADHALNSIHNIK  195 (224)
Q Consensus       124 ~~~~~~~~KP~~~~~~~al~~~~~~~~~~l~VgDs~~Di~~A~~~G~~~v~v~~~~~~~~~d~~i~~~~dl~  195 (224)
                          ...+||++..+..+++++|+++++|++|||+.||+..++++|+..++-..+.-...++++++ ..+|.
T Consensus       243 ----iv~~k~K~~~L~~la~~lgi~~~qtIaVGDg~NDl~m~~~AGlgiA~nAkp~Vk~~Ad~~i~-~~~l~  309 (322)
T PRK11133        243 ----IVDAQYKADTLTRLAQEYEIPLAQTVAIGDGANDLPMIKAAGLGIAYHAKPKVNEQAQVTIR-HADLM  309 (322)
T ss_pred             ----cCCcccHHHHHHHHHHHcCCChhhEEEEECCHHHHHHHHHCCCeEEeCCCHHHHhhCCEEec-CcCHH
Confidence                01139999999999999999999999999999999999999998777334333667899886 44443

>TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit

Probab=99.21  E-value=5.7e-11  Score=97.74  Aligned_cols=111  Identities=17%  Similarity=0.190  Sum_probs=86.0

Q ss_pred             HHHHhcCCCCeEEEeCCChHHHHHHHHHcCCccccceeEeeccCCCCCCCCCCCCCcccccCCccccccCCCCHHHHHHH
Q 027403           62 RNLLLSMPQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCKPSLEAIETA  141 (224)
Q Consensus        62 ~~~L~~l~~~~~I~Tn~~~~~~~~~l~~lgl~~~fd~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~~~~~~~a  141 (224)
                      ...|++.+.+++|+||++...++..++++|+..+|+.                                .||+|..+..+
T Consensus        43 ~~~L~~~Gi~laIiT~k~~~~~~~~l~~lgi~~~f~~--------------------------------~kpkp~~~~~~   90 (169)
T TIGR02726        43 VIVLQLCGIDVAIITSKKSGAVRHRAEELKIKRFHEG--------------------------------IKKKTEPYAQM   90 (169)
T ss_pred             HHHHHHCCCEEEEEECCCcHHHHHHHHHCCCcEEEec--------------------------------CCCCHHHHHHH
Confidence            4566677789999999999999999999999988863                                18899999999


Q ss_pred             HHHhCCCCCcEEEEeCChhcHHHHHHcCCeEEEECCCCC--CCCCceEeCCHh---HHHHHHHHHHhhc
Q 027403          142 IRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP--VPPADHALNSIH---NIKEAIPEIWEGE  205 (224)
Q Consensus       142 l~~~~~~~~~~l~VgDs~~Di~~A~~~G~~~v~v~~~~~--~~~~d~~i~~~~---dl~~~i~~~~~~~  205 (224)
                      ++++++++++|++|||+.+|+.+++.+|+..+ +.+...  ...++++..+-.   -+.+++..++...
T Consensus        91 ~~~l~~~~~ev~~iGD~~nDi~~~~~ag~~~a-m~nA~~~lk~~A~~I~~~~~~~g~v~e~~e~il~~~  158 (169)
T TIGR02726        91 LEEMNISDAEVCYVGDDLVDLSMMKRVGLAVA-VGDAVADVKEAAAYVTTARGGHGAVREVAELILKAQ  158 (169)
T ss_pred             HHHcCcCHHHEEEECCCHHHHHHHHHCCCeEE-CcCchHHHHHhCCEEcCCCCCCCHHHHHHHHHHHhc
Confidence            99999999999999999999999999999744 444322  444677654311   1344444455443

Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases.

>PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional

Probab=99.19  E-value=8.4e-11  Score=97.42  Aligned_cols=104  Identities=18%  Similarity=0.315  Sum_probs=84.0

Q ss_pred             HHHhcCCCCeEEEeCCChHHHHHHHHHcCCccccceeEeeccCCCCCCCCCCCCCcccccCCccccccCCCCHHHHHHHH
Q 027403           63 NLLLSMPQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCKPSLEAIETAI  142 (224)
Q Consensus        63 ~~L~~l~~~~~I~Tn~~~~~~~~~l~~lgl~~~fd~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~~~~~~~al  142 (224)
                      ..|+.-..+++|+||++...+...++.+|+..+|++                                +++++..+..++
T Consensus        58 ~~L~~~Gi~v~I~T~~~~~~v~~~l~~lgl~~~f~g--------------------------------~~~k~~~l~~~~  105 (183)
T PRK09484         58 RCLLTSGIEVAIITGRKSKLVEDRMTTLGITHLYQG--------------------------------QSNKLIAFSDLL  105 (183)
T ss_pred             HHHHHCCCEEEEEeCCCcHHHHHHHHHcCCceeecC--------------------------------CCcHHHHHHHHH
Confidence            344444578999999999999999999998877752                                277889999999


Q ss_pred             HHhCCCCCcEEEEeCChhcHHHHHHcCCeEEEECCCCC--CCCCceEeC------CHhHHHHHHH
Q 027403          143 RIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP--VPPADHALN------SIHNIKEAIP  199 (224)
Q Consensus       143 ~~~~~~~~~~l~VgDs~~Di~~A~~~G~~~v~v~~~~~--~~~~d~~i~------~~~dl~~~i~  199 (224)
                      +++|+++++|+||||+.+|+.+|+++|+.+ .+.+...  ...++++++      .+.++.++|.
T Consensus       106 ~~~gl~~~ev~~VGDs~~D~~~a~~aG~~~-~v~~~~~~~~~~a~~v~~~~~g~g~~~el~~~i~  169 (183)
T PRK09484        106 EKLAIAPEQVAYIGDDLIDWPVMEKVGLSV-AVADAHPLLLPRADYVTRIAGGRGAVREVCDLLL  169 (183)
T ss_pred             HHhCCCHHHEEEECCCHHHHHHHHHCCCeE-ecCChhHHHHHhCCEEecCCCCCCHHHHHHHHHH
Confidence            999999999999999999999999999984 4554332  345789886      5677766543

>TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase

Probab=99.19  E-value=6e-11  Score=100.18  Aligned_cols=125  Identities=13%  Similarity=0.107  Sum_probs=91.9

Q ss_pred             CCCCChhHHHHHhcCC---CCeEEEeCCChHHHHHHHHHcCCcccc---ceeEeeccCCCCCCCCCCCCCcccccCCccc
Q 027403           54 KLKPDPVLRNLLLSMP---QRKIIFTNADQKHAMEVLGRLGLEDCF---EGIICFETINPRLQPADNTDGIENNSFSSNQ  127 (224)
Q Consensus        54 ~~~~~~g~~~~L~~l~---~~~~I~Tn~~~~~~~~~l~~lgl~~~f---d~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~  127 (224)
                      ..++.||+.++|+.++   .+++|+||+....+..++++++..+.+   +.++..+....                    
T Consensus        68 ~~~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~~~~~~i~~n~~~~~~~~~~~--------------------  127 (214)
T TIGR03333        68 TAEIREGFREFVAFINEHGIPFYVISGGMDFFVYPLLEGIVEKDRIYCNEADFSNEYIHI--------------------  127 (214)
T ss_pred             cCcccccHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHhhCCcccEEeceeEeeCCeeEE--------------------
Confidence            3689999999999996   678899999999999999987543333   12222222222                    


Q ss_pred             cccCCCCHHHH----------HHHHHHhCCCCCcEEEEeCChhcHHHHHHcCCeEEEECCCC-----CCCCCceEeCCHh
Q 027403          128 RILCKPSLEAI----------ETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSV-----PVPPADHALNSIH  192 (224)
Q Consensus       128 ~~~~KP~~~~~----------~~al~~~~~~~~~~l~VgDs~~Di~~A~~~G~~~v~v~~~~-----~~~~~d~~i~~~~  192 (224)
                         .||+|..+          ..++++++..+++++|||||.+|+.+|+.+|+  +++....     ....+.+.++++.
T Consensus       128 ---~~p~~~~~~~~~~cg~~K~~~l~~~~~~~~~~i~iGDg~~D~~~a~~Ad~--~~ar~~l~~~~~~~~~~~~~~~~f~  202 (214)
T TIGR03333       128 ---DWPHPCDGTCQNQCGCCKPSLIRKLSEPNDYHIVIGDSVTDVEAAKQSDL--CFARDYLLNECEELGLNHAPFQDFY  202 (214)
T ss_pred             ---eCCCCCccccccCCCCCHHHHHHHHhhcCCcEEEEeCCHHHHHHHHhCCe--eEehHHHHHHHHHcCCCccCcCCHH
Confidence               36766654          36777777788999999999999999999998  4443321     1233566789999


Q ss_pred             HHHHHHHHHHh
Q 027403          193 NIKEAIPEIWE  203 (224)
Q Consensus       193 dl~~~i~~~~~  203 (224)
                      |+.+.++++++
T Consensus       203 di~~~l~~~~~  213 (214)
T TIGR03333       203 DVRKELENVKE  213 (214)
T ss_pred             HHHHHHHHHhc
Confidence            99999988775

Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX.

>TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase

Probab=99.18  E-value=1.6e-10  Score=94.15  Aligned_cols=124  Identities=14%  Similarity=0.138  Sum_probs=86.7

Q ss_pred             CCCCHHHHHHHHhccCCCCCCCCChhHHHHHhcCC---CCeEEEeCCChHHHHHHHHHcCCccccceeEeeccCCCCCCC
Q 027403           35 YEFDNDEFHAFVHGKLPYEKLKPDPVLRNLLLSMP---QRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQP  111 (224)
Q Consensus        35 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~L~~l~---~~~~I~Tn~~~~~~~~~l~~lgl~~~fd~ii~~~~~~~~~~~  111 (224)
                      .+.+.+++...+..      ++++||+.++|+.|+   ++++|+||++...+...++++|+.++|+.+++++.....   
T Consensus        57 ~~~~~~~~~~~~~~------~~l~~g~~~ll~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~---  127 (188)
T TIGR01489        57 SGLKEDEILEVLKS------APIDPGFKEFIAFIKEHGIDFIVISDGNDFFIDPVLEGIGEKDVFIEIYSNPASFDN---  127 (188)
T ss_pred             cCCCHHHHHHHHHh------CCCCccHHHHHHHHHHcCCcEEEEeCCcHHHHHHHHHHcCChhheeEEeccCceECC---
Confidence            34556666665442      688999999999996   678999999999999999999999999999987653321   


Q ss_pred             CCCCCCcc-cccCCccccccCCCCHHHHHHHHHHhCCCCCcEEEEeCChhcHHHHHHcCCe
Q 027403          112 ADNTDGIE-NNSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLH  171 (224)
Q Consensus       112 ~~~~~~~~-~~~~~~~~~~~~KP~~~~~~~al~~~~~~~~~~l~VgDs~~Di~~A~~~G~~  171 (224)
                       ....++. .+|-.......+.+++.+++.+.+..   +++++||||+.+|+.+|+++++-
T Consensus       128 -~g~~~~~~~~~~~~~~~~~g~~K~~~~~~~~~~~---~~~~i~iGD~~~D~~aa~~~d~~  184 (188)
T TIGR01489       128 -DGRHIVWPHHCHGCCSCPCGCCKGKVIHKLSEPK---YQHIIYIGDGVTDVCPAKLSDVV  184 (188)
T ss_pred             -CCcEEEecCCCCccCcCCCCCCHHHHHHHHHhhc---CceEEEECCCcchhchHhcCCcc
Confidence             0000000 00000000112355688888887665   79999999999999999998654

Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact.

>COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only]

Probab=99.11  E-value=2.7e-10  Score=92.79  Aligned_cols=94  Identities=19%  Similarity=0.399  Sum_probs=81.1

Q ss_pred             CCCCCCChhHHHHHhcCC---CCeEEEeCCChHHHHHHHHHcCCccccceeEeeccCCCCCCCCCCCCCcccccCCcccc
Q 027403           52 YEKLKPDPVLRNLLLSMP---QRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQR  128 (224)
Q Consensus        52 ~~~~~~~~g~~~~L~~l~---~~~~I~Tn~~~~~~~~~l~~lgl~~~fd~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~  128 (224)
                      .+....-|.+++.+..++   .+++|+||+....+....+++|+.-.+-         .                     
T Consensus        42 wd~~~~tpe~~~W~~e~k~~gi~v~vvSNn~e~RV~~~~~~l~v~fi~~---------A---------------------   91 (175)
T COG2179          42 WDNPDATPELRAWLAELKEAGIKVVVVSNNKESRVARAAEKLGVPFIYR---------A---------------------   91 (175)
T ss_pred             ccCCCCCHHHHHHHHHHHhcCCEEEEEeCCCHHHHHhhhhhcCCceeec---------c---------------------
Confidence            445567789999999997   5788999999999999999999642221         1                     


Q ss_pred             ccCCCCHHHHHHHHHHhCCCCCcEEEEeCCh-hcHHHHHHcCCeEEEECC
Q 027403          129 ILCKPSLEAIETAIRIANVDPKKTIFFDDSA-RNIASAKAAGLHTVIVGS  177 (224)
Q Consensus       129 ~~~KP~~~~~~~al~~~~~~~~~~l~VgDs~-~Di~~A~~~G~~~v~v~~  177 (224)
                        .||.+..|..|++++++++++|+||||.. .|+.+++.+|++||.|..
T Consensus        92 --~KP~~~~fr~Al~~m~l~~~~vvmVGDqL~TDVlggnr~G~~tIlV~P  139 (175)
T COG2179          92 --KKPFGRAFRRALKEMNLPPEEVVMVGDQLFTDVLGGNRAGMRTILVEP  139 (175)
T ss_pred             --cCccHHHHHHHHHHcCCChhHEEEEcchhhhhhhcccccCcEEEEEEE
Confidence              49999999999999999999999999998 599999999999999954

>TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459

Probab=99.08  E-value=8.8e-11  Score=101.01  Aligned_cols=97  Identities=20%  Similarity=0.166  Sum_probs=76.1

Q ss_pred             ChhHHHHHhcCCC--CeEEEeCCChHHHHHHHHHcCCcccccee--EeeccCCCCCCCCCCCCCcccccCCccccccCCC
Q 027403           58 DPVLRNLLLSMPQ--RKIIFTNADQKHAMEVLGRLGLEDCFEGI--ICFETINPRLQPADNTDGIENNSFSSNQRILCKP  133 (224)
Q Consensus        58 ~~g~~~~L~~l~~--~~~I~Tn~~~~~~~~~l~~lgl~~~fd~i--i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP  133 (224)
                      ++++.++|+.+..  ...|+||.+.......+.++|...+|..+  ++.+....                       +||
T Consensus       140 ~~~~~~~l~~l~~~g~~~i~tN~d~~~~~~~~~~~~~g~~~~~i~~~g~~~~~~-----------------------gKP  196 (242)
T TIGR01459       140 LDEFDELFAPIVARKIPNICANPDRGINQHGIYRYGAGYYAELIKQLGGKVIYS-----------------------GKP  196 (242)
T ss_pred             HHHHHHHHHHHHhCCCcEEEECCCEeccCCCceEecccHHHHHHHHhCCcEecC-----------------------CCC
Confidence            6888888887642  22488999887776667777777677654  34433222                       599


Q ss_pred             CHHHHHHHHHHhCCC-CCcEEEEeCC-hhcHHHHHHcCCeEEEECC
Q 027403          134 SLEAIETAIRIANVD-PKKTIFFDDS-ARNIASAKAAGLHTVIVGS  177 (224)
Q Consensus       134 ~~~~~~~al~~~~~~-~~~~l~VgDs-~~Di~~A~~~G~~~v~v~~  177 (224)
                      +|.+|+.++++++.. +++++||||+ ..||.+|+++|+++++|.+
T Consensus       197 ~~~~~~~~~~~~~~~~~~~~~~vGD~~~~Di~~a~~~G~~~i~v~t  242 (242)
T TIGR01459       197 YPAIFHKALKECSNIPKNRMLMVGDSFYTDILGANRLGIDTALVLT  242 (242)
T ss_pred             CHHHHHHHHHHcCCCCcccEEEECCCcHHHHHHHHHCCCeEEEEeC
Confidence            999999999999975 6789999999 5899999999999999853

This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily)

>PRK10444 UMP phosphatase; Provisional

Probab=99.00  E-value=1.4e-09  Score=94.41  Aligned_cols=70  Identities=24%  Similarity=0.275  Sum_probs=62.6

Q ss_pred             ccccccCCCCHHHHHHHHHHhCCCCCcEEEEeCCh-hcHHHHHHcCCeEEEECCCCC--------CCCCceEeCCHhHH
Q 027403          125 SNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSA-RNIASAKAAGLHTVIVGSSVP--------VPPADHALNSIHNI  194 (224)
Q Consensus       125 ~~~~~~~KP~~~~~~~al~~~~~~~~~~l~VgDs~-~Di~~A~~~G~~~v~v~~~~~--------~~~~d~~i~~~~dl  194 (224)
                      ......+||+|.+|..+++.+++++++|+||||+. .||.+|+++|+++++|.+|..        ...++++++|+.++
T Consensus       167 ~~~~~~gKP~~~~~~~~~~~~~~~~~~~v~IGD~~~tDi~~A~~~G~~~vlV~~G~~~~~~l~~~~~~pd~~~~sl~el  245 (248)
T PRK10444        167 RKPFYVGKPSPWIIRAALNKMQAHSEETVIVGDNLRTDILAGFQAGLETILVLSGVSTLDDIDSMPFRPSWIYPSVADI  245 (248)
T ss_pred             CCccccCCCCHHHHHHHHHHcCCCcccEEEECCCcHHHHHHHHHcCCCEEEECCCCCCHHHHhcCCCCCCEEECCHHHh
Confidence            34455689999999999999999999999999997 799999999999999999853        25689999999887

>PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase)

Probab=98.99  E-value=8.5e-10  Score=91.26  Aligned_cols=87  Identities=23%  Similarity=0.354  Sum_probs=75.0

Q ss_pred             CCCChhHHHHHhcCC---CCeEEEeCCChHHHHHHHHHcCCccccceeEeeccCCCCCCCCCCCCCcccccCCccccccC
Q 027403           55 LKPDPVLRNLLLSMP---QRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILC  131 (224)
Q Consensus        55 ~~~~~g~~~~L~~l~---~~~~I~Tn~~~~~~~~~l~~lgl~~~fd~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  131 (224)
                      -.+.|++.++|+.|+   .+++++||.+...+....+.+|+   ++.++.++..  .                       
T Consensus       126 d~~~~~~~~~l~~L~~~Gi~~~i~TGD~~~~a~~~~~~lgi---~~~~v~a~~~--~-----------------------  177 (215)
T PF00702_consen  126 DPLRPGAKEALQELKEAGIKVAILTGDNESTASAIAKQLGI---FDSIVFARVI--G-----------------------  177 (215)
T ss_dssp             EEBHTTHHHHHHHHHHTTEEEEEEESSEHHHHHHHHHHTTS---CSEEEEESHE--T-----------------------
T ss_pred             CcchhhhhhhhhhhhccCcceeeeecccccccccccccccc---cccccccccc--c-----------------------
Confidence            367899999999997   46889999999999999999998   3433444322  2                       


Q ss_pred             CCCHHHHHHHHHHhCCCCCcEEEEeCChhcHHHHHHcC
Q 027403          132 KPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAG  169 (224)
Q Consensus       132 KP~~~~~~~al~~~~~~~~~~l~VgDs~~Di~~A~~~G  169 (224)
                      ||.+.+|..+++.+++++.+|+||||+.||+.+++++|
T Consensus       178 kP~~k~~~~~i~~l~~~~~~v~~vGDg~nD~~al~~Ag  215 (215)
T PF00702_consen  178 KPEPKIFLRIIKELQVKPGEVAMVGDGVNDAPALKAAG  215 (215)
T ss_dssp             TTHHHHHHHHHHHHTCTGGGEEEEESSGGHHHHHHHSS
T ss_pred             cccchhHHHHHHHHhcCCCEEEEEccCHHHHHHHHhCc
Confidence            99999999999999999999999999999999999987

This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J ....

>TIGR01686 FkbH FkbH-like domain

Probab=98.96  E-value=1.8e-09  Score=96.89  Aligned_cols=88  Identities=16%  Similarity=0.183  Sum_probs=79.1

Q ss_pred             CCChhHHHHHhcCC---CCeEEEeCCChHHHHHHHHH----cCCccccceeEeeccCCCCCCCCCCCCCcccccCCcccc
Q 027403           56 KPDPVLRNLLLSMP---QRKIIFTNADQKHAMEVLGR----LGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQR  128 (224)
Q Consensus        56 ~~~~g~~~~L~~l~---~~~~I~Tn~~~~~~~~~l~~----lgl~~~fd~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~  128 (224)
                      .+++|+.++|+.|+   ..++|+||++...+...+++    +++.++|+.+.++                          
T Consensus        31 ~~~~~~~e~L~~L~~~Gi~lai~S~n~~~~a~~~l~~~~~~~~~~~~f~~~~~~--------------------------   84 (320)
T TIGR01686        31 PLHKTLQEKIKTLKKQGFLLALASKNDEDDAKKVFERRKDFILQAEDFDARSIN--------------------------   84 (320)
T ss_pred             ccHHHHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHhCccccCcHHHeeEEEEe--------------------------
Confidence            46899999999997   56779999999999999999    9999999887544                          


Q ss_pred             ccCCCCHHHHHHHHHHhCCCCCcEEEEeCChhcHHHHHHcCCe
Q 027403          129 ILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLH  171 (224)
Q Consensus       129 ~~~KP~~~~~~~al~~~~~~~~~~l~VgDs~~Di~~A~~~G~~  171 (224)
                        +||+|..+..+++++|+.+++++||||++.|+.++++++-.
T Consensus        85 --~~pk~~~i~~~~~~l~i~~~~~vfidD~~~d~~~~~~~lp~  125 (320)
T TIGR01686        85 --WGPKSESLRKIAKKLNLGTDSFLFIDDNPAERANVKITLPV  125 (320)
T ss_pred             --cCchHHHHHHHHHHhCCCcCcEEEECCCHHHHHHHHHHCCC
Confidence              29999999999999999999999999999999999997654

The C-terminal portion of this domain is unique to this family (by BLAST).

>TIGR01544 HAD-SF-IE haloacid dehalogenase superfamily, subfamily IE hydrolase, TIGR01544

Probab=98.95  E-value=8.8e-09  Score=90.88  Aligned_cols=114  Identities=13%  Similarity=0.077  Sum_probs=88.6

Q ss_pred             cCCCCHHHHHHHHhccCCCCCCCCChhHHHHHhcCC---CCeEEEeCCChHHHHHHHHHcCCccccceeEeeccCCCCCC
Q 027403           34 GYEFDNDEFHAFVHGKLPYEKLKPDPVLRNLLLSMP---QRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQ  110 (224)
Q Consensus        34 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~L~~l~---~~~~I~Tn~~~~~~~~~l~~lgl~~~fd~ii~~~~~~~~~~  110 (224)
                      +..++.+++...+.+    +.+.+.||+.++++.|+   .+++|+|++....+..+++++|+.+.+..|++..-..    
T Consensus       103 ~~~~~~e~i~~~v~~----~~l~l~pG~~efl~~L~~~GIpv~IvS~G~~~~Ie~vL~~lgl~~~~~~IvSN~L~f----  174 (277)
T TIGR01544       103 QQAFPKAKIKEIVAE----SDVMLKDGYENFFDKLQQHSIPVFIFSAGIGNVLEEVLRQAGVYHPNVKVVSNFMDF----  174 (277)
T ss_pred             cCCCCHHHHHHHHhh----cCCccCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHHcCCCCcCceEEeeeEEE----
Confidence            566677777777653    45889999999999996   6799999999999999999999877777765433211    


Q ss_pred             CCCCCCCcccccCCccccccCCCCH---------HHHHHHHHHhC--CCCCcEEEEeCChhcHHHHHHc
Q 027403          111 PADNTDGIENNSFSSNQRILCKPSL---------EAIETAIRIAN--VDPKKTIFFDDSARNIASAKAA  168 (224)
Q Consensus       111 ~~~~~~~~~~~~~~~~~~~~~KP~~---------~~~~~al~~~~--~~~~~~l~VgDs~~Di~~A~~~  168 (224)
                                   ...++..|||.|         .++..+.+.++  .++++|++||||.+|+.+|.-.
T Consensus       175 -------------~~dGvltG~~~P~i~~~~K~~~v~~~~~~~~~~~~~~~~vI~vGDs~~Dl~ma~g~  230 (277)
T TIGR01544       175 -------------DEDGVLKGFKGPLIHTFNKNHDVALRNTEYFNQLKDRSNIILLGDSQGDLRMADGV  230 (277)
T ss_pred             -------------CCCCeEeCCCCCcccccccHHHHHHHHHHHhCccCCcceEEEECcChhhhhHhcCC
Confidence                         112233457777         77778888888  7899999999999999997644

This group of sequences was found during searches for members of the haloacid dehalogenase (HAD) superfamily. All of the conserved catalytic motifs are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches (IA, TIGR01493, TIGR01509, TIGR01549; IB, TIGR01488; IC, TIGR01494; ID, TIGR01658; IF TIGR01545) of that subfamily as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.

>TIGR01663 PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase

Probab=98.93  E-value=2.4e-09  Score=102.01  Aligned_cols=89  Identities=26%  Similarity=0.303  Sum_probs=76.5

Q ss_pred             CChhHHHHHhcCC---CCeEEEeCCCh------------HHHHHHHHHcCCccccceeEeeccCCCCCCCCCCCCCcccc
Q 027403           57 PDPVLRNLLLSMP---QRKIIFTNADQ------------KHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENN  121 (224)
Q Consensus        57 ~~~g~~~~L~~l~---~~~~I~Tn~~~------------~~~~~~l~~lgl~~~fd~ii~~~~~~~~~~~~~~~~~~~~~  121 (224)
                      ++||+.+.|+.|+   ++++|+||.+.            ..+..+++++|+.  |+.+++.++...+             
T Consensus       198 l~pgV~e~L~~L~~~Gy~IvIvTNQ~gI~~G~~~~~~~~~ki~~iL~~lgip--fdviia~~~~~~R-------------  262 (526)
T TIGR01663       198 IFPEIPEKLKELEADGFKICIFTNQGGIARGKINADDFKAKIEAIVAKLGVP--FQVFIAIGAGFYR-------------  262 (526)
T ss_pred             cccCHHHHHHHHHHCCCEEEEEECCcccccCcccHHHHHHHHHHHHHHcCCc--eEEEEeCCCCCCC-------------
Confidence            5899999999996   78999999876            4578899999985  8888877765554             


Q ss_pred             cCCccccccCCCCHHHHHHHHHHhC----CCCCcEEEEeCChhcHHHHHHcCC
Q 027403          122 SFSSNQRILCKPSLEAIETAIRIAN----VDPKKTIFFDDSARNIASAKAAGL  170 (224)
Q Consensus       122 ~~~~~~~~~~KP~~~~~~~al~~~~----~~~~~~l~VgDs~~Di~~A~~~G~  170 (224)
                                ||+|.++..++++++    +++++++||||+..|+.+|+++|-
T Consensus       263 ----------KP~pGm~~~a~~~~~~~~~Id~~~S~~VGDaagr~~~g~~ag~  305 (526)
T TIGR01663       263 ----------KPLTGMWDHLKEEANDGTEIQEDDCFFVGDAAGRPANGKAAGK  305 (526)
T ss_pred             ----------CCCHHHHHHHHHhcCcccCCCHHHeEEeCCcccchHHHHhcCC
Confidence                      999999999999995    899999999999988888776665

Note that the EC number for the kinase function is: 2.7.1.78

>TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490

Probab=98.86  E-value=7.7e-09  Score=85.68  Aligned_cols=129  Identities=12%  Similarity=0.090  Sum_probs=91.0

Q ss_pred             CCCCHHHHHHHHhccCCC-CCCCCChhHHHHHhcCC---CCeEEEeCCChHHHHHHHHHcCCccccce-eEeeccCCCCC
Q 027403           35 YEFDNDEFHAFVHGKLPY-EKLKPDPVLRNLLLSMP---QRKIIFTNADQKHAMEVLGRLGLEDCFEG-IICFETINPRL  109 (224)
Q Consensus        35 ~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~L~~l~---~~~~I~Tn~~~~~~~~~l~~lgl~~~fd~-ii~~~~~~~~~  109 (224)
                      .+.+.+++........+. -...++|++.++|+.++   .+++|+||++...+..+++++|+.++|.. +...++...  
T Consensus        65 ~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~v~ivS~s~~~~v~~~~~~lg~~~~~~~~l~~~~~g~~--  142 (202)
T TIGR01490        65 AGLLEEDVRAIVEEFVNQKIESILYPEARDLIRWHKAEGHTIVLVSASLTILVKPLARILGIDNAIGTRLEESEDGIY--  142 (202)
T ss_pred             cCCCHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHcCCcceEecceEEcCCCEE--
Confidence            355666665554433221 02468899999998885   57889999999999999999998877765 332222100  


Q ss_pred             CCCCCCCCcccccCCccccccCCCCHHHHHHHHHHhCCCCCcEEEEeCChhcHHHHHHcCCeEEEEC
Q 027403          110 QPADNTDGIENNSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVG  176 (224)
Q Consensus       110 ~~~~~~~~~~~~~~~~~~~~~~KP~~~~~~~al~~~~~~~~~~l~VgDs~~Di~~A~~~G~~~v~v~  176 (224)
                                ..+..+ ....++++...+...+++.++++++|+++|||.+|+..++.+|..++...
T Consensus       143 ----------~g~~~~-~~~~g~~K~~~l~~~~~~~~~~~~~~~~~gDs~~D~~~~~~a~~~~~v~~  198 (202)
T TIGR01490       143 ----------TGNIDG-NNCKGEGKVHALAELLAEEQIDLKDSYAYGDSISDLPLLSLVGHPYVVNP  198 (202)
T ss_pred             ----------eCCccC-CCCCChHHHHHHHHHHHHcCCCHHHcEeeeCCcccHHHHHhCCCcEEeCC
Confidence                      000000 11124778888999999999999999999999999999999998765443

A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog.

>TIGR02244 HAD-IG-Ncltidse HAD superfamily (subfamily IG) hydrolase, 5'-nucleotidase

Probab=98.86  E-value=1.2e-08  Score=92.66  Aligned_cols=123  Identities=16%  Similarity=0.206  Sum_probs=86.2

Q ss_pred             CCCCChhHHHHHhcCC---CCeEEEeCCChHHHHHHHHHc-C-------CccccceeEeeccCCCCCCCCCCCCCccccc
Q 027403           54 KLKPDPVLRNLLLSMP---QRKIIFTNADQKHAMEVLGRL-G-------LEDCFEGIICFETINPRLQPADNTDGIENNS  122 (224)
Q Consensus        54 ~~~~~~g~~~~L~~l~---~~~~I~Tn~~~~~~~~~l~~l-g-------l~~~fd~ii~~~~~~~~~~~~~~~~~~~~~~  122 (224)
                      .+.+.||+.++|+.|+   .+++|+||++...+...++.+ |       +.++||.||++..-+..-...-.+--+ +.+
T Consensus       182 yv~~~pgl~elL~~Lr~~G~klfLvTNS~~~yt~~im~~l~g~~~~~~~w~~yFD~IIt~a~KP~FF~~~~pf~~v-~~~  260 (343)
T TIGR02244       182 YVLRDPKLPLFLSKLKEHGKKLFLLTNSDYDYTDKGMKYLLGPFLGEHDWRDYFDVVIVDARKPGFFTEGRPFRQV-DVE  260 (343)
T ss_pred             HhccchhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhhCCcccccchHhhCcEEEeCCCCCcccCCCCceEEE-eCC
Confidence            4678999999999996   678999999999999999996 7       889999998876543221100000000 000


Q ss_pred             CCcc--cccc-CCCC----HHHHHHHHHHhCCCCCcEEEEeCCh-hcHHHHH-HcCCeEEEECC
Q 027403          123 FSSN--QRIL-CKPS----LEAIETAIRIANVDPKKTIFFDDSA-RNIASAK-AAGLHTVIVGS  177 (224)
Q Consensus       123 ~~~~--~~~~-~KP~----~~~~~~al~~~~~~~~~~l~VgDs~-~Di~~A~-~~G~~~v~v~~  177 (224)
                      .+..  .... -+|.    ...+....+.+++++++++||||+. .||.+|+ .+||+|++|..
T Consensus       261 ~g~~~~~~~~~l~~g~vY~gGn~~~~~~~l~~~~~~vlYvGD~i~~Di~~~kk~~Gw~TvlI~p  324 (343)
T TIGR02244       261 TGSLKWGEVDGLEPGKVYSGGSLKQFHELLKWRGKEVLYFGDHIYGDLLRSKKKRGWRTAAIIP  324 (343)
T ss_pred             CCcccCCccccccCCCeEeCCCHHHHHHHHCCCCCcEEEECCcchHHHHhhHHhcCcEEEEEch
Confidence            0000  0000 0111    2456778889999999999999998 5999998 89999999954

A TIGRFAMs model (TIGR01993) represents a (putative) family of _pyrimidine_ 5'-nucleotidases which are also subfamily I HAD's, which should not be confused with the current model.

>TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like

Probab=98.77  E-value=2.7e-08  Score=80.43  Aligned_cols=104  Identities=16%  Similarity=0.198  Sum_probs=76.4

Q ss_pred             CCCCChhHHHHHhcCC---CCeEEEeCCChHHHHHHHHHcCCccccceeEeeccCCCCCCCCCCCCCcccccCCcccccc
Q 027403           54 KLKPDPVLRNLLLSMP---QRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRIL  130 (224)
Q Consensus        54 ~~~~~~g~~~~L~~l~---~~~~I~Tn~~~~~~~~~l~~lgl~~~fd~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  130 (224)
                      .+.+.||+.++|+.++   .+++|+|++....+...++++|+..+|...+..++-+..           .....+.....
T Consensus        71 ~~~~~~g~~~~l~~l~~~g~~~~ivS~~~~~~i~~~~~~~g~~~~~~~~~~~~~~g~~-----------~g~~~~~~~~~  139 (177)
T TIGR01488        71 QVALRPGARELISWLKERGIDTVIVSGGFDFFVEPVAEKLGIDDVFANRLEFDDNGLL-----------TGPIEGQVNPE  139 (177)
T ss_pred             cCCcCcCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCchheeeeEEECCCCEE-----------eCccCCcccCC
Confidence            4567899999999886   678899999999999999999998777655444311110           00000001122


Q ss_pred             CCCCHHHHHHHHHHhCCCCCcEEEEeCChhcHHHHHHc
Q 027403          131 CKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAA  168 (224)
Q Consensus       131 ~KP~~~~~~~al~~~~~~~~~~l~VgDs~~Di~~A~~~  168 (224)
                      +..+...+...+++.+++++++++||||.+|+..++.+
T Consensus       140 ~~~K~~~l~~~~~~~~~~~~~~~~iGDs~~D~~~~~~a  177 (177)
T TIGR01488       140 GECKGKVLKELLEESKITLKKIIAVGDSVNDLPMLKLA  177 (177)
T ss_pred             cchHHHHHHHHHHHhCCCHHHEEEEeCCHHHHHHHhcC
Confidence            46667888888999999999999999999999998753

Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences.

>TIGR01456 CECR5 HAD-superfamily class IIA hydrolase, TIGR01456, CECR5

Probab=98.73  E-value=3.9e-08  Score=88.30  Aligned_cols=71  Identities=17%  Similarity=0.173  Sum_probs=60.2

Q ss_pred             cccCCCCHHHHHHHHHHh--------CC-----CCCcEEEEeCCh-hcHHHHHHcCCeEEEECCCCC-------CCCCce
Q 027403          128 RILCKPSLEAIETAIRIA--------NV-----DPKKTIFFDDSA-RNIASAKAAGLHTVIVGSSVP-------VPPADH  186 (224)
Q Consensus       128 ~~~~KP~~~~~~~al~~~--------~~-----~~~~~l~VgDs~-~Di~~A~~~G~~~v~v~~~~~-------~~~~d~  186 (224)
                      ...|||++.+|+.+++.+        +.     ++++++||||+. .||.+|+++||.+++|.+|.-       ...+++
T Consensus       229 ~~~GKP~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~mIGD~~~tDI~ga~~~G~~silV~tG~~~~~~~~~~~~p~~  308 (321)
T TIGR01456       229 YTLGKPTKLTYDFAEDVLIDWEKRLSGTKPSTSPFHALYMVGDNPASDIIGAQNYGWFSCLVKTGVYNGGDDLKECKPTL  308 (321)
T ss_pred             EEcCCCChHHHHHHHHHHHHHHhhhccccccCCChheEEEEcCChhhhhhhHHhCCceEEEecccccCCCCCCCCCCCCE
Confidence            466999999999999888        43     457999999998 799999999999999998732       234799


Q ss_pred             EeCCHhHHHHHH
Q 027403          187 ALNSIHNIKEAI  198 (224)
Q Consensus       187 ~i~~~~dl~~~i  198 (224)
                      +++|+.|+...|
T Consensus       309 vv~~l~e~~~~i  320 (321)
T TIGR01456       309 IVNDVFDAVTKI  320 (321)
T ss_pred             EECCHHHHHHHh
Confidence            999999998765

The Schizosaccharomyces pombe sequence (EGAD|138276) is annotated as "phosphatidyl synthase," however this is due entirely to a C-terminal region of the protein (outside the region of similarity of this model) which is highly homologous to a family of CDP-alcohol phosphatidyltransferases. (Thus, the annotation of GP|4226073 from C. elegans as similar to phosphatidyl synthase, is a mistake as this gene does not contain the C-terminal portion). The physical connection of the phosphatidyl synthase and the HAD-superfamily hydrolase domain in S. pombe may, however, be an important clue to the substrate for the hydrolases in this equivalog.

>KOG2882 consensus p-Nitrophenyl phosphatase [Inorganic ion transport and metabolism]

Probab=98.67  E-value=2e-08  Score=88.74  Aligned_cols=71  Identities=27%  Similarity=0.326  Sum_probs=62.1

Q ss_pred             cccCCCCHHHHHHHHHHhCCCCCcEEEEeCChh-cHHHHHHcCCeEEEECCCCC------------CCCCceEeCCHhHH
Q 027403          128 RILCKPSLEAIETAIRIANVDPKKTIFFDDSAR-NIASAKAAGLHTVIVGSSVP------------VPPADHALNSIHNI  194 (224)
Q Consensus       128 ~~~~KP~~~~~~~al~~~~~~~~~~l~VgDs~~-Di~~A~~~G~~~v~v~~~~~------------~~~~d~~i~~~~dl  194 (224)
                      ...|||++.+++.++++.+++|++++||||+.+ ||+-+++.|+.++++.+|..            ...+||+++++.++
T Consensus       220 ~v~GKP~~~m~~~l~~~~~i~psRt~mvGDRL~TDIlFG~~~G~~TLLvltGv~~led~~~~~~~~~~~PDyy~~~l~d~  299 (306)
T KOG2882|consen  220 IVLGKPSTFMFEYLLEKFNIDPSRTCMVGDRLDTDILFGKNCGFKTLLVLSGVTTLEDILEAQGDNKMVPDYYADSLGDL  299 (306)
T ss_pred             eecCCCCHHHHHHHHHHcCCCcceEEEEcccchhhhhHhhccCcceEEEecCcCcHHHHHhcccccCCCCchHHhhHHHH
Confidence            445699999999999999999999999999996 99999999999999998853            23389999998888


Q ss_pred             HHHH
Q 027403          195 KEAI  198 (224)
Q Consensus       195 ~~~i  198 (224)
                      ...+
T Consensus       300 ~~~~  303 (306)
T KOG2882|consen  300 LPLL  303 (306)
T ss_pred             hhhc
Confidence            7654

>TIGR01512 ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase

Probab=98.64  E-value=1.4e-07  Score=90.31  Aligned_cols=109  Identities=17%  Similarity=0.320  Sum_probs=83.7

Q ss_pred             CCCChhHHHHHhcCC---C-CeEEEeCCChHHHHHHHHHcCCccccceeEeeccCCCCCCCCCCCCCcccccCCcccccc
Q 027403           55 LKPDPVLRNLLLSMP---Q-RKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRIL  130 (224)
Q Consensus        55 ~~~~~g~~~~L~~l~---~-~~~I~Tn~~~~~~~~~l~~lgl~~~fd~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  130 (224)
                      -+++||+.++|+.|+   . +++++||.+...+...++++|+.++|..+.      +                       
T Consensus       361 d~l~~~~~e~i~~L~~~Gi~~v~vvTgd~~~~a~~i~~~lgi~~~f~~~~------p-----------------------  411 (536)
T TIGR01512       361 DEPRPDAAEAIAELKALGIEKVVMLTGDRRAVAERVARELGIDEVHAELL------P-----------------------  411 (536)
T ss_pred             ccchHHHHHHHHHHHHcCCCcEEEEcCCCHHHHHHHHHHcCChhhhhccC------c-----------------------
Confidence            368899999999996   5 788999999999999999999988775321      1                       


Q ss_pred             CCCCHHHHHHHHHHhCCCCCcEEEEeCChhcHHHHHHcCCeEEEEC-CCCC--CCCCceEe--CCHhHHHHHH
Q 027403          131 CKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVG-SSVP--VPPADHAL--NSIHNIKEAI  198 (224)
Q Consensus       131 ~KP~~~~~~~al~~~~~~~~~~l~VgDs~~Di~~A~~~G~~~v~v~-~~~~--~~~~d~~i--~~~~dl~~~i  198 (224)
                       +++.    ..+++++...++++||||+.+|+.+++++|+ .+.++ .+..  ...+|+++  +++.+|.+++
T Consensus       412 -~~K~----~~i~~l~~~~~~v~~vGDg~nD~~al~~A~v-gia~g~~~~~~~~~~ad~vl~~~~l~~l~~~i  478 (536)
T TIGR01512       412 -EDKL----EIVKELREKYGPVAMVGDGINDAPALAAADV-GIAMGASGSDVAIETADVVLLNDDLSRLPQAI  478 (536)
T ss_pred             -HHHH----HHHHHHHhcCCEEEEEeCCHHHHHHHHhCCE-EEEeCCCccHHHHHhCCEEEECCCHHHHHHHH
Confidence             2233    3556666667899999999999999999996 23333 2211  34589988  8999998766

.

>TIGR02251 HIF-SF_euk Dullard-like phosphatase domain

Probab=98.64  E-value=1.2e-08  Score=83.13  Aligned_cols=96  Identities=16%  Similarity=0.104  Sum_probs=82.2

Q ss_pred             CCCChhHHHHHhcCC--CCeEEEeCCChHHHHHHHHHcCCcc-ccceeEeeccCCCCCCCCCCCCCcccccCCccccccC
Q 027403           55 LKPDPVLRNLLLSMP--QRKIIFTNADQKHAMEVLGRLGLED-CFEGIICFETINPRLQPADNTDGIENNSFSSNQRILC  131 (224)
Q Consensus        55 ~~~~~g~~~~L~~l~--~~~~I~Tn~~~~~~~~~l~~lgl~~-~fd~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  131 (224)
                      +..-||+.++|+.|.  +.++|.|++++.++..++++++... +|+.+++.++....                       
T Consensus        41 v~~RPgl~eFL~~l~~~yei~I~Ts~~~~yA~~il~~ldp~~~~f~~~l~r~~~~~~-----------------------   97 (162)
T TIGR02251        41 VFKRPHVDEFLERVSKWYELVIFTASLEEYADPVLDILDRGGKVISRRLYRESCVFT-----------------------   97 (162)
T ss_pred             EEECCCHHHHHHHHHhcCEEEEEcCCcHHHHHHHHHHHCcCCCEEeEEEEccccEEe-----------------------
Confidence            467799999999997  7899999999999999999999875 89998887776542                       


Q ss_pred             CCCHHHHHHHHHHhCCCCCcEEEEeCChhcHHHHHHcCCeEEEEC
Q 027403          132 KPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVG  176 (224)
Q Consensus       132 KP~~~~~~~al~~~~~~~~~~l~VgDs~~Di~~A~~~G~~~v~v~  176 (224)
                      +|+   |...++.+|.++++|++|||++.++..+..+|+.+....
T Consensus        98 ~~~---~~K~L~~l~~~~~~vIiVDD~~~~~~~~~~NgI~i~~f~  139 (162)
T TIGR02251        98 NGK---YVKDLSLVGKDLSKVIIIDNSPYSYSLQPDNAIPIKSWF  139 (162)
T ss_pred             CCC---EEeEchhcCCChhhEEEEeCChhhhccCccCEeecCCCC
Confidence            555   677788899999999999999999999999998765443

This domain is related to domains found in FCP1-like phosphatases (TIGR02250), and together both are detected by the Pfam model pfam03031.

>PTZ00445 p36-lilke protein; Provisional

Probab=98.63  E-value=1.3e-07  Score=80.23  Aligned_cols=110  Identities=15%  Similarity=0.115  Sum_probs=77.7

Q ss_pred             CChhHHHHHhcCC---CCeEEEeCCChH---------------HHHHHHHHcCCccccceeEeeccCCCCCCCCCCCCCc
Q 027403           57 PDPVLRNLLLSMP---QRKIIFTNADQK---------------HAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGI  118 (224)
Q Consensus        57 ~~~g~~~~L~~l~---~~~~I~Tn~~~~---------------~~~~~l~~lgl~~~fd~ii~~~~~~~~~~~~~~~~~~  118 (224)
                      .-|+...++.+|+   .+++|+|=+++.               .+...++..+-.--.+.+++..-...           
T Consensus        76 ~tpefk~~~~~l~~~~I~v~VVTfSd~~~~~~~~~~~~Isg~~li~~~lk~s~~~~~i~~~~~yyp~~w-----------  144 (219)
T PTZ00445         76 VTPDFKILGKRLKNSNIKISVVTFSDKELIPSENRPRYISGDRMVEAALKKSKCDFKIKKVYAYYPKFW-----------  144 (219)
T ss_pred             CCHHHHHHHHHHHHCCCeEEEEEccchhhccccCCcceechHHHHHHHHHhcCccceeeeeeeeCCccc-----------
Confidence            4577888888885   789999988874               46666776554322333433221100           


Q ss_pred             ccccCCccccccCCCCHHH--H--HHHHHHhCCCCCcEEEEeCChhcHHHHHHcCCeEEEECCC
Q 027403          119 ENNSFSSNQRILCKPSLEA--I--ETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSS  178 (224)
Q Consensus       119 ~~~~~~~~~~~~~KP~~~~--~--~~al~~~~~~~~~~l~VgDs~~Di~~A~~~G~~~v~v~~~  178 (224)
                       .+-.-=.+.-+.||.|.+  |  +.++++.|++|++++||+|+..++.+|++.|+.++.+..+
T Consensus       145 -~~p~~y~~~gl~KPdp~iK~yHle~ll~~~gl~peE~LFIDD~~~NVeaA~~lGi~ai~f~~~  207 (219)
T PTZ00445        145 -QEPSDYRPLGLDAPMPLDKSYHLKQVCSDFNVNPDEILFIDDDMNNCKNALKEGYIALHVTGN  207 (219)
T ss_pred             -CChhhhhhhcccCCCccchHHHHHHHHHHcCCCHHHeEeecCCHHHHHHHHHCCCEEEEcCCh
Confidence             000000112334999999  9  9999999999999999999999999999999999999754

>TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459

Probab=98.61  E-value=2.5e-07  Score=79.55  Aligned_cols=90  Identities=13%  Similarity=0.078  Sum_probs=73.2

Q ss_pred             CCCCCChhHHHHHhcCC---CCeEEEeCCChHHHH--HHHHHcCCcc-ccceeEeeccCCCCCCCCCCCCCcccccCCcc
Q 027403           53 EKLKPDPVLRNLLLSMP---QRKIIFTNADQKHAM--EVLGRLGLED-CFEGIICFETINPRLQPADNTDGIENNSFSSN  126 (224)
Q Consensus        53 ~~~~~~~g~~~~L~~l~---~~~~I~Tn~~~~~~~--~~l~~lgl~~-~fd~ii~~~~~~~~~~~~~~~~~~~~~~~~~~  126 (224)
                      ....++||+.++|+.|+   ++++++||+++....  ..++++|+.. +|+.|+++++..                    
T Consensus        21 ~~~~~~pga~e~L~~L~~~G~~~~ivTN~~~~~~~~~~~L~~~gl~~~~~~~Ii~s~~~~--------------------   80 (242)
T TIGR01459        21 DGNHTYPGAVQNLNKIIAQGKPVYFVSNSPRNIFSLHKTLKSLGINADLPEMIISSGEIA--------------------   80 (242)
T ss_pred             cCCccCccHHHHHHHHHHCCCEEEEEeCCCCChHHHHHHHHHCCCCccccceEEccHHHH--------------------
Confidence            34678999999999997   578899999887655  7899999987 999999988653                    


Q ss_pred             ccccCCCCHHHHHHHHHHhCCCCCcEEEEeCChhcHHHHHHcCC
Q 027403          127 QRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGL  170 (224)
Q Consensus       127 ~~~~~KP~~~~~~~al~~~~~~~~~~l~VgDs~~Di~~A~~~G~  170 (224)
                              ...+..++++++.+++++++|||+..|+......|.
T Consensus        81 --------~~~l~~~~~~~~~~~~~~~~vGd~~~d~~~~~~~~~  116 (242)
T TIGR01459        81 --------VQMILESKKRFDIRNGIIYLLGHLENDIINLMQCYT  116 (242)
T ss_pred             --------HHHHHhhhhhccCCCceEEEeCCcccchhhhcCCCc
Confidence                    135666677888889999999999999887755544

This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily)

>KOG3040 consensus Predicted sugar phosphatase (HAD superfamily) [General function prediction only]

Probab=98.58  E-value=9.2e-08  Score=80.80  Aligned_cols=73  Identities=22%  Similarity=0.402  Sum_probs=63.3

Q ss_pred             cccCCCCHHHHHHHHHHhCCCCCcEEEEeCChh-cHHHHHHcCCeEEEECCCCC--------CCCCceEeCCHhHHHHHH
Q 027403          128 RILCKPSLEAIETAIRIANVDPKKTIFFDDSAR-NIASAKAAGLHTVIVGSSVP--------VPPADHALNSIHNIKEAI  198 (224)
Q Consensus       128 ~~~~KP~~~~~~~al~~~~~~~~~~l~VgDs~~-Di~~A~~~G~~~v~v~~~~~--------~~~~d~~i~~~~dl~~~i  198 (224)
                      ..-+||+|..|+.+++.+|++|++++||||..+ |+-+|.++||+.+.|.+|.-        ...+|.++++|.|..++|
T Consensus       177 ~vvGKP~~~fFe~al~~~gv~p~~aVMIGDD~~dDvgGAq~~GMrgilVkTGK~rpsDe~k~~~~p~~~~d~f~~AVd~I  256 (262)
T KOG3040|consen  177 TVVGKPSPFFFESALQALGVDPEEAVMIGDDLNDDVGGAQACGMRGILVKTGKFRPSDEEKPPVPPDLTADNFADAVDLI  256 (262)
T ss_pred             EEecCCCHHHHHHHHHhcCCChHHheEEccccccchhhHhhhcceeEEeeccccCCcccccCCCCcchhhhhHHHHHHHH
Confidence            334699999999999999999999999999996 99999999999999988732        445788899998888877


Q ss_pred             HH
Q 027403          199 PE  200 (224)
Q Consensus       199 ~~  200 (224)
                      .+
T Consensus       257 ~q  258 (262)
T KOG3040|consen  257 IQ  258 (262)
T ss_pred             Hh
Confidence            54

>TIGR01525 ATPase-IB_hvy heavy metal translocating P-type ATPase

Probab=98.53  E-value=5.3e-07  Score=86.62  Aligned_cols=107  Identities=15%  Similarity=0.274  Sum_probs=81.3

Q ss_pred             CCCChhHHHHHhcCC----CCeEEEeCCChHHHHHHHHHcCCccccceeEeeccCCCCCCCCCCCCCcccccCCcccccc
Q 027403           55 LKPDPVLRNLLLSMP----QRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRIL  130 (224)
Q Consensus        55 ~~~~~g~~~~L~~l~----~~~~I~Tn~~~~~~~~~l~~lgl~~~fd~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  130 (224)
                      -.++||+.++|+.|+    ++++|+||.+...+...++++|+.++|..+.      +                       
T Consensus       383 d~~~~g~~e~l~~L~~~g~i~v~ivTgd~~~~a~~i~~~lgi~~~f~~~~------p-----------------------  433 (556)
T TIGR01525       383 DQLRPEAKEAIAALKRAGGIKLVMLTGDNRSAAEAVAAELGIDEVHAELL------P-----------------------  433 (556)
T ss_pred             ccchHhHHHHHHHHHHcCCCeEEEEeCCCHHHHHHHHHHhCCCeeeccCC------H-----------------------
Confidence            468999999999995    4678999999999999999999987776421      1                       


Q ss_pred             CCCCHHHHHHHHHHhCCCCCcEEEEeCChhcHHHHHHcCCeEEEECCCCC----CCCCceEeC--CHhHHHHHH
Q 027403          131 CKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP----VPPADHALN--SIHNIKEAI  198 (224)
Q Consensus       131 ~KP~~~~~~~al~~~~~~~~~~l~VgDs~~Di~~A~~~G~~~v~v~~~~~----~~~~d~~i~--~~~dl~~~i  198 (224)
                       ++++.    ++++++..+.+|+||||+.+|+.+++++|+   ++.++..    ...+|+++.  ++..+.+++
T Consensus       434 -~~K~~----~v~~l~~~~~~v~~vGDg~nD~~al~~A~v---gia~g~~~~~~~~~Ad~vi~~~~~~~l~~~i  499 (556)
T TIGR01525       434 -EDKLA----IVKELQEEGGVVAMVGDGINDAPALAAADV---GIAMGAGSDVAIEAADIVLLNDDLSSLPTAI  499 (556)
T ss_pred             -HHHHH----HHHHHHHcCCEEEEEECChhHHHHHhhCCE---eEEeCCCCHHHHHhCCEEEeCCCHHHHHHHH
Confidence             22333    444455467899999999999999999994   4444422    345888887  677777765

This alignment encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512.

>TIGR01460 HAD-SF-IIA Haloacid Dehalogenase Superfamily Class (subfamily) IIA

Probab=98.49  E-value=2.1e-07  Score=79.99  Aligned_cols=50  Identities=26%  Similarity=0.476  Sum_probs=46.3

Q ss_pred             ccCCCCHHHHHHHHHHhCCCCCcE-EEEeCCh-hcHHHHHHcCCeEEEECCC
Q 027403          129 ILCKPSLEAIETAIRIANVDPKKT-IFFDDSA-RNIASAKAAGLHTVIVGSS  178 (224)
Q Consensus       129 ~~~KP~~~~~~~al~~~~~~~~~~-l~VgDs~-~Di~~A~~~G~~~v~v~~~  178 (224)
                      ..+||++.+|+.++++++++++++ +||||+. .||.+|+++|+++++|.+|
T Consensus       185 ~~~KP~~~~~~~~~~~~~~~~~~~~~~IGD~~~~Di~~A~~~G~~~i~v~~G  236 (236)
T TIGR01460       185 VVGKPSPAIYRAALNLLQARPERRDVMVGDNLRTDILGAKNAGFDTLLVLTG  236 (236)
T ss_pred             eecCCCHHHHHHHHHHhCCCCccceEEECCCcHHHHHHHHHCCCcEEEEecC
Confidence            356999999999999999998887 9999998 7999999999999999875

Many of the genes in this subfamily have been annotated as "pNPPase" "4-nitrophenyl phosphatase" or "NPPase". These all refer to the same activity versus a common lab test compound used to determine phosphatase activity. There is no evidence that this activity is physiologically relevant.

>PRK08238 hypothetical protein; Validated

Probab=98.45  E-value=1.2e-06  Score=82.89  Aligned_cols=100  Identities=21%  Similarity=0.297  Sum_probs=79.3

Q ss_pred             CCCCCCCCChhHHHHHhcCC---CCeEEEeCCChHHHHHHHHHcCCccccceeEeeccCCCCCCCCCCCCCcccccCCcc
Q 027403           50 LPYEKLKPDPVLRNLLLSMP---QRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSN  126 (224)
Q Consensus        50 ~~~~~~~~~~g~~~~L~~l~---~~~~I~Tn~~~~~~~~~l~~lgl~~~fd~ii~~~~~~~~~~~~~~~~~~~~~~~~~~  126 (224)
                      ++.+.++..|++.++|+.++   .+++|+||+++..++..++++|+   ||.++++++...                   
T Consensus        66 ~d~~~lp~~pga~e~L~~lk~~G~~v~LaTas~~~~a~~i~~~lGl---Fd~Vigsd~~~~-------------------  123 (479)
T PRK08238         66 LDVATLPYNEEVLDYLRAERAAGRKLVLATASDERLAQAVAAHLGL---FDGVFASDGTTN-------------------  123 (479)
T ss_pred             CChhhCCCChhHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCC---CCEEEeCCCccc-------------------
Confidence            34456778899999999996   57889999999999999999997   899999987654                   


Q ss_pred             ccccCCCCHHHHHHHHHHhCCCCCcEEEEeCChhcHHHHHHcCCeEEEECCCC
Q 027403          127 QRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSV  179 (224)
Q Consensus       127 ~~~~~KP~~~~~~~al~~~~~~~~~~l~VgDs~~Di~~A~~~G~~~v~v~~~~  179 (224)
                          +||++... .+.+.++  .++++++|||.+|+..++.+| +.+.|+.+.
T Consensus       124 ----~kg~~K~~-~l~~~l~--~~~~~yvGDS~~Dlp~~~~A~-~av~Vn~~~  168 (479)
T PRK08238        124 ----LKGAAKAA-ALVEAFG--ERGFDYAGNSAADLPVWAAAR-RAIVVGASP  168 (479)
T ss_pred             ----cCCchHHH-HHHHHhC--ccCeeEecCCHHHHHHHHhCC-CeEEECCCH
Confidence                26655432 3445555  356899999999999999999 678887553

>TIGR01511 ATPase-IB1_Cu copper-(or silver)-translocating P-type ATPase

Probab=98.42  E-value=1.4e-06  Score=84.05  Aligned_cols=107  Identities=17%  Similarity=0.298  Sum_probs=79.4

Q ss_pred             CCChhHHHHHhcCC---CCeEEEeCCChHHHHHHHHHcCCccccceeEeeccCCCCCCCCCCCCCcccccCCccccccCC
Q 027403           56 KPDPVLRNLLLSMP---QRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCK  132 (224)
Q Consensus        56 ~~~~g~~~~L~~l~---~~~~I~Tn~~~~~~~~~l~~lgl~~~fd~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~K  132 (224)
                      +++||+.++++.|+   ++++++||.+...+....+++|+. +|.     + ..                        ++
T Consensus       405 ~l~~~a~e~i~~Lk~~Gi~v~ilSgd~~~~a~~ia~~lgi~-~~~-----~-~~------------------------p~  453 (562)
T TIGR01511       405 QLRPEAKEVIQALKRRGIEPVMLTGDNRKTAKAVAKELGIN-VRA-----E-VL------------------------PD  453 (562)
T ss_pred             cccHHHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHcCCc-EEc-----c-CC------------------------hH
Confidence            68899999999986   678899999999999999999984 221     1 11                        13


Q ss_pred             CCHHHHHHHHHHhCCCCCcEEEEeCChhcHHHHHHcCCeEEEECCCCC--CCCCceEe--CCHhHHHHHH
Q 027403          133 PSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP--VPPADHAL--NSIHNIKEAI  198 (224)
Q Consensus       133 P~~~~~~~al~~~~~~~~~~l~VgDs~~Di~~A~~~G~~~v~v~~~~~--~~~~d~~i--~~~~dl~~~i  198 (224)
                      ++...    +++++.++++|+||||+.+|+.+++++|+. +.++.+..  ...+|+++  +++..|.+++
T Consensus       454 ~K~~~----v~~l~~~~~~v~~VGDg~nD~~al~~A~vg-ia~g~g~~~a~~~Advvl~~~~l~~l~~~i  518 (562)
T TIGR01511       454 DKAAL----IKELQEKGRVVAMVGDGINDAPALAQADVG-IAIGAGTDVAIEAADVVLMRNDLNDVATAI  518 (562)
T ss_pred             HHHHH----HHHHHHcCCEEEEEeCCCccHHHHhhCCEE-EEeCCcCHHHHhhCCEEEeCCCHHHHHHHH
Confidence            34444    444444678999999999999999999973 44444332  34589988  4788887766

One member from Halobacterium is annotated as "molybdenum-binding protein" although no evidence can be found for this classification.

>PF12689 Acid_PPase: Acid Phosphatase; InterPro: IPR010036 This entry represents two closely related clades of sequences from eukaryotes and archaea

Probab=98.41  E-value=1e-06  Score=72.54  Aligned_cols=99  Identities=20%  Similarity=0.323  Sum_probs=69.8

Q ss_pred             CCCCCChhHHHHHhcCC---CCeEEEeCC-ChHHHHHHHHHcCCc----------cccceeEeeccCCCCCCCCCCCCCc
Q 027403           53 EKLKPDPVLRNLLLSMP---QRKIIFTNA-DQKHAMEVLGRLGLE----------DCFEGIICFETINPRLQPADNTDGI  118 (224)
Q Consensus        53 ~~~~~~~g~~~~L~~l~---~~~~I~Tn~-~~~~~~~~l~~lgl~----------~~fd~ii~~~~~~~~~~~~~~~~~~  118 (224)
                      +.+.++|++.++|+.|+   .+++++|-+ ..+.++..|+.+++.          ++|+.    -.+.            
T Consensus        42 ~~v~lypdv~~iL~~L~~~gv~lavASRt~~P~~A~~~L~~l~i~~~~~~~~~~~~~F~~----~eI~------------  105 (169)
T PF12689_consen   42 EEVSLYPDVPEILQELKERGVKLAVASRTDEPDWARELLKLLEIDDADGDGVPLIEYFDY----LEIY------------  105 (169)
T ss_dssp             -EE---TTHHHHHHHHHHCT--EEEEE--S-HHHHHHHHHHTT-C----------CCECE----EEES------------
T ss_pred             CEEEeCcCHHHHHHHHHHCCCEEEEEECCCChHHHHHHHHhcCCCccccccccchhhcch----hhee------------
Confidence            35789999999999997   678899954 467999999999998          56654    1122            


Q ss_pred             ccccCCccccccCCCCHHHHHHHHHHhCCCCCcEEEEeCChhcHHHHHHcCCeEEEECCCC
Q 027403          119 ENNSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSV  179 (224)
Q Consensus       119 ~~~~~~~~~~~~~KP~~~~~~~al~~~~~~~~~~l~VgDs~~Di~~A~~~G~~~v~v~~~~  179 (224)
                                  +-.+...|..+.++.|++.++.+|++|-.+++....+.|..++.+.+|.
T Consensus       106 ------------~gsK~~Hf~~i~~~tgI~y~eMlFFDDe~~N~~~v~~lGV~~v~v~~Gl  154 (169)
T PF12689_consen  106 ------------PGSKTTHFRRIHRKTGIPYEEMLFFDDESRNIEVVSKLGVTCVLVPDGL  154 (169)
T ss_dssp             ------------SS-HHHHHHHHHHHH---GGGEEEEES-HHHHHHHHTTT-EEEE-SSS-
T ss_pred             ------------cCchHHHHHHHHHhcCCChhHEEEecCchhcceeeEecCcEEEEeCCCC
Confidence                        2468999999999999999999999999999999999999999998864

The mouse enzyme has been characterised as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues [, ].; GO: 0016791 phosphatase activity; PDB: 1U7P_A 1U7O_A 2WM8_A.

>COG4229 Predicted enolase-phosphatase [Energy production and conversion]

Probab=98.38  E-value=1e-05  Score=67.22  Aligned_cols=113  Identities=18%  Similarity=0.221  Sum_probs=90.5

Q ss_pred             CCCChhHHHHHhcCC---CCeEEEeCCChHHHHHHHHHc---CCccccceeEeeccCCCCCCCCCCCCCcccccCCcccc
Q 027403           55 LKPDPVLRNLLLSMP---QRKIIFTNADQKHAMEVLGRL---GLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQR  128 (224)
Q Consensus        55 ~~~~~g~~~~L~~l~---~~~~I~Tn~~~~~~~~~l~~l---gl~~~fd~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~  128 (224)
                      -.++|++.+.|++.+   .+++|.|+++.......+.+.   .|..+|++.+-.. ++                      
T Consensus       102 ahlypDav~~ik~wk~~g~~vyiYSSGSV~AQkL~Fghs~agdL~~lfsGyfDtt-iG----------------------  158 (229)
T COG4229         102 AHLYPDAVQAIKRWKALGMRVYIYSSGSVKAQKLFFGHSDAGDLNSLFSGYFDTT-IG----------------------  158 (229)
T ss_pred             cccCHhHHHHHHHHHHcCCcEEEEcCCCchhHHHhhcccccccHHhhhcceeecc-cc----------------------
Confidence            468999999999987   689999999988777777654   2456677655442 22                      


Q ss_pred             ccCCCCHHHHHHHHHHhCCCCCcEEEEeCChhcHHHHHHcCCeEEEECCCCCCCCCc----eEeCCHh
Q 027403          129 ILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVPVPPAD----HALNSIH  192 (224)
Q Consensus       129 ~~~KP~~~~~~~al~~~~~~~~~~l~VgDs~~Di~~A~~~G~~~v~v~~~~~~~~~d----~~i~~~~  192 (224)
                        .|.....|..+++..|++|.+++|+.|.+..+.+|+.+|+.++.+.++...+-+|    .+++|+.
T Consensus       159 --~KrE~~SY~kIa~~iGl~p~eilFLSDn~~EL~AA~~vGl~t~l~~R~g~~P~~d~~~~~~~~sf~  224 (229)
T COG4229         159 --KKRESQSYAKIAGDIGLPPAEILFLSDNPEELKAAAGVGLATGLAVRPGNAPVPDGQGFLVYKSFE  224 (229)
T ss_pred             --ccccchhHHHHHHhcCCCchheEEecCCHHHHHHHHhcchheeeeecCCCCCCCCCcCceeeechh
Confidence              3889999999999999999999999999999999999999999998876544443    3556655

>COG0560 SerB Phosphoserine phosphatase [Amino acid transport and metabolism]

Probab=98.37  E-value=1.6e-06  Score=73.78  Aligned_cols=123  Identities=15%  Similarity=0.171  Sum_probs=91.5

Q ss_pred             CCCChhHHHHHhcCC---CCeEEEeCCChHHHHHHHHHcCCccccceeEeeccCCCCCCCCCCCCCcccccCCccccccC
Q 027403           55 LKPDPVLRNLLLSMP---QRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILC  131 (224)
Q Consensus        55 ~~~~~g~~~~L~~l~---~~~~I~Tn~~~~~~~~~l~~lgl~~~fd~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  131 (224)
                      .+++||+.++++.++   .+++|+|+++...+..+.+.+|+...+......++ +..       -|    . ..-....+
T Consensus        76 ~~l~~ga~elv~~lk~~G~~v~iiSgg~~~lv~~ia~~lg~d~~~an~l~~~d-G~l-------tG----~-v~g~~~~~  142 (212)
T COG0560          76 LRLTPGAEELVAALKAAGAKVVIISGGFTFLVEPIAERLGIDYVVANELEIDD-GKL-------TG----R-VVGPICDG  142 (212)
T ss_pred             CcCCccHHHHHHHHHHCCCEEEEEcCChHHHHHHHHHHhCCchheeeEEEEeC-CEE-------ec----e-eeeeecCc
Confidence            688999999999997   78999999999999999999999888876655554 110       00    0 00001112


Q ss_pred             CCCHHHHHHHHHHhCCCCCcEEEEeCChhcHHHHHHcCCeEEEECCCCCCCCCceEeCC
Q 027403          132 KPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVPVPPADHALNS  190 (224)
Q Consensus       132 KP~~~~~~~al~~~~~~~~~~l~VgDs~~Di~~A~~~G~~~v~v~~~~~~~~~d~~i~~  190 (224)
                      +-+.......++++|+++++++.+|||.||+-.-..+|.+.++-+.+.....++..+..
T Consensus       143 ~~K~~~l~~~~~~~g~~~~~~~a~gDs~nDlpml~~ag~~ia~n~~~~l~~~a~~~~~~  201 (212)
T COG0560         143 EGKAKALRELAAELGIPLEETVAYGDSANDLPMLEAAGLPIAVNPKPKLRALADVRIWP  201 (212)
T ss_pred             chHHHHHHHHHHHcCCCHHHeEEEcCchhhHHHHHhCCCCeEeCcCHHHHHHHHHhcCh
Confidence            56788889999999999999999999999999999999986666555433334444333

>PF06888 Put_Phosphatase: Putative Phosphatase; InterPro: IPR016965 This group represents phosphatases related to PHOSPHO1 and PHOSPHO2 []

Probab=98.36  E-value=9.8e-06  Score=70.04  Aligned_cols=132  Identities=18%  Similarity=0.247  Sum_probs=92.2

Q ss_pred             CCCHHHHHHHHhccCCCCCCCCChhHHHHHhcC--C---CCeEEEeCCChHHHHHHHHHcCCccccceeEeeccCCCCCC
Q 027403           36 EFDNDEFHAFVHGKLPYEKLKPDPVLRNLLLSM--P---QRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQ  110 (224)
Q Consensus        36 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~L~~l--~---~~~~I~Tn~~~~~~~~~l~~lgl~~~fd~ii~~~~~~~~~~  110 (224)
                      +.+++++.+.+..      +++.||+.++++.+  +   ..++|+|++..-.+...|++.|+.+.|+.|+|....... .
T Consensus        57 gvt~~~I~~~l~~------ip~~pgm~~~l~~l~~~~~~~~~~IiSDaNs~fI~~iL~~~gl~~~f~~I~TNpa~~~~-~  129 (234)
T PF06888_consen   57 GVTPEDIRDALRS------IPIDPGMKELLRFLAKNQRGFDLIIISDANSFFIETILEHHGLRDCFSEIFTNPACFDA-D  129 (234)
T ss_pred             CCCHHHHHHHHHc------CCCCccHHHHHHHHHhcCCCceEEEEeCCcHhHHHHHHHhCCCccccceEEeCCceecC-C
Confidence            4677777776654      78999999999999  3   568899999999999999999999999998875321110 0


Q ss_pred             CCCCCCCcccccCCccccccCCC---CHHHHHHHHHHh---CCCCCcEEEEeCChhcHHHHHHcCC-eEEEECCCC
Q 027403          111 PADNTDGIENNSFSSNQRILCKP---SLEAIETAIRIA---NVDPKKTIFFDDSARNIASAKAAGL-HTVIVGSSV  179 (224)
Q Consensus       111 ~~~~~~~~~~~~~~~~~~~~~KP---~~~~~~~al~~~---~~~~~~~l~VgDs~~Di~~A~~~G~-~~v~v~~~~  179 (224)
                      -++.  ...++.   |.|..|-|   +..+.+..++..   |+..++++||||+.+|+.++.+.+- +.++...++
T Consensus       130 G~l~--v~pyh~---h~C~~C~~NmCK~~il~~~~~~~~~~g~~~~rviYiGDG~nD~Cp~~~L~~~D~v~~R~~~  200 (234)
T PF06888_consen  130 GRLR--VRPYHS---HGCSLCPPNMCKGKILERLLQEQAQRGVPYDRVIYIGDGRNDFCPALRLRPRDVVFPRKGY  200 (234)
T ss_pred             ceEE--EeCccC---CCCCcCCCccchHHHHHHHHHHHhhcCCCcceEEEECCCCCCcCcccccCCCCEEecCCCC
Confidence            0000  001111   22333322   356666666663   6788999999999999999998765 456665554

It includes plant phosphatases with homology to the haloacid dehalogenase (HAD) superfamily [, ]. PHOSPHO1 is a phosphoethanolamine/phosphocholine phosphatase [], while PHOSPHO2 has high activity toward pyridoxal 5'-phosphate (PLP), and it is active at much lower level toward pyrophosphate, phosphoethanolamine (PEA)and phosphocholine (PCho) []. ; GO: 0016791 phosphatase activity

>PF08645 PNK3P: Polynucleotide kinase 3 phosphatase; InterPro: IPR013954 Polynucleotide kinase 3 phosphatases play a role in the repair of single breaks in DNA induced by DNA-damaging agents such as gamma radiation and camptothecin []

Probab=98.22  E-value=2.3e-06  Score=69.66  Aligned_cols=95  Identities=19%  Similarity=0.183  Sum_probs=65.3

Q ss_pred             CCCCC-hhHHHHHhcCC---CCeEEEeCCC--------------hHHHHHHHHHcCCccccceeEeeccCCCCCCCCCCC
Q 027403           54 KLKPD-PVLRNLLLSMP---QRKIIFTNAD--------------QKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNT  115 (224)
Q Consensus        54 ~~~~~-~g~~~~L~~l~---~~~~I~Tn~~--------------~~~~~~~l~~lgl~~~fd~ii~~~~~~~~~~~~~~~  115 (224)
                      .++.+ |++.+.|+.+.   ++++|+||..              ...+..+++.+++.  +...++...-..        
T Consensus        26 D~~~~~~~v~~~L~~l~~~Gy~IvIvTNQ~gi~~~~~~~~~~~~~~ki~~il~~l~ip--~~~~~a~~~d~~--------   95 (159)
T PF08645_consen   26 DWKFFPPGVPEALRELHKKGYKIVIVTNQSGIGRGMGEKDLENFHEKIENILKELGIP--IQVYAAPHKDPC--------   95 (159)
T ss_dssp             GGEEC-TTHHHHHHHHHHTTEEEEEEEE-CCCCCTBTCCHHHHHHHHHHHHHHHCTS---EEEEECGCSSTT--------
T ss_pred             HhhhcchhHHHHHHHHHhcCCeEEEEeCccccccccccchHHHHHHHHHHHHHHcCCc--eEEEecCCCCCC--------
Confidence            35554 47999998885   8899999962              13556677777764  332333333233        


Q ss_pred             CCcccccCCccccccCCCCHHHHHHHHHHhCC----CCCcEEEEeCC-----------hhcHHHHHHcCCeEE
Q 027403          116 DGIENNSFSSNQRILCKPSLEAIETAIRIANV----DPKKTIFFDDS-----------ARNIASAKAAGLHTV  173 (224)
Q Consensus       116 ~~~~~~~~~~~~~~~~KP~~~~~~~al~~~~~----~~~~~l~VgDs-----------~~Di~~A~~~G~~~v  173 (224)
                                     +||.+.+++.+++.++.    +.++.+||||.           -.|..-|.++|+++.
T Consensus        96 ---------------RKP~~GM~~~~~~~~~~~~~id~~~Sf~VGDaagr~~~~~d~s~~D~~fA~N~gi~f~  153 (159)
T PF08645_consen   96 ---------------RKPNPGMWEFALKDYNDGVEIDLANSFYVGDAAGRSKKKKDFSDSDRKFALNCGIKFY  153 (159)
T ss_dssp             ---------------STTSSHHHHHHCCCTSTT--S-CCC-EEEESSCHCTB-S--S--HHHHHHHHHT--EE
T ss_pred             ---------------CCCchhHHHHHHHhccccccccccceEEEeccCCCCCcccccChhHHHHHHHcCCccc
Confidence                           49999999999999985    89999999996           468999999999854

; PDB: 2FPW_A 2FPR_A 2FPX_A 2FPS_A 2FPU_B 3ZVM_A 1YJ5_A 3ZVL_A 3U7E_B 3U7G_A ....

>PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases

Probab=98.20  E-value=7.1e-06  Score=67.52  Aligned_cols=94  Identities=17%  Similarity=0.256  Sum_probs=71.0

Q ss_pred             CCCCCChhHHHHHhcCC---C--CeEEEeCCC-------hHHHHHHHHHcCCccccceeEeeccCCCCCCCCCCCCCccc
Q 027403           53 EKLKPDPVLRNLLLSMP---Q--RKIIFTNAD-------QKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIEN  120 (224)
Q Consensus        53 ~~~~~~~g~~~~L~~l~---~--~~~I~Tn~~-------~~~~~~~l~~lgl~~~fd~ii~~~~~~~~~~~~~~~~~~~~  120 (224)
                      ..-++.|.+.+.++.++   .  +++|+||+.       ...+...-+.+|+. .|    ...   .             
T Consensus        56 ~~~~i~~~~~~~~~~l~~~~~~~~v~IvSNsaGs~~d~~~~~a~~~~~~lgIp-vl----~h~---~-------------  114 (168)
T PF09419_consen   56 YEDEIPPEYAEWLNELKKQFGKDRVLIVSNSAGSSDDPDGERAEALEKALGIP-VL----RHR---A-------------  114 (168)
T ss_pred             CcCcCCHHHHHHHHHHHHHCCCCeEEEEECCCCcccCccHHHHHHHHHhhCCc-EE----EeC---C-------------
Confidence            34577888999999887   2  488999984       66777777888853 11    111   1             


Q ss_pred             ccCCccccccCCCCHHHHHHHHHHhCC-----CCCcEEEEeCCh-hcHHHHHHcCCeEEEECCCC
Q 027403          121 NSFSSNQRILCKPSLEAIETAIRIANV-----DPKKTIFFDDSA-RNIASAKAAGLHTVIVGSSV  179 (224)
Q Consensus       121 ~~~~~~~~~~~KP~~~~~~~al~~~~~-----~~~~~l~VgDs~-~Di~~A~~~G~~~v~v~~~~  179 (224)
                                .||  ..+..+++.++.     +|+++++|||.. .|+..|+.+|+.+||+..|.
T Consensus       115 ----------kKP--~~~~~i~~~~~~~~~~~~p~eiavIGDrl~TDVl~gN~~G~~tilv~~gv  167 (168)
T PF09419_consen  115 ----------KKP--GCFREILKYFKCQKVVTSPSEIAVIGDRLFTDVLMGNRMGSYTILVTDGV  167 (168)
T ss_pred             ----------CCC--ccHHHHHHHHhhccCCCCchhEEEEcchHHHHHHHhhccCceEEEEecCc
Confidence                      177  555666666654     499999999998 59999999999999999875

All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family.

>PRK10671 copA copper exporting ATPase; Provisional

Probab=98.19  E-value=1e-05  Score=81.29  Aligned_cols=109  Identities=13%  Similarity=0.231  Sum_probs=83.2

Q ss_pred             CCChhHHHHHhcCC---CCeEEEeCCChHHHHHHHHHcCCccccceeEeeccCCCCCCCCCCCCCcccccCCccccccCC
Q 027403           56 KPDPVLRNLLLSMP---QRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCK  132 (224)
Q Consensus        56 ~~~~g~~~~L~~l~---~~~~I~Tn~~~~~~~~~l~~lgl~~~fd~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~K  132 (224)
                      ++.||+.+.|+.|+   ++++++|+.+...+....+++|+.++|..+                                .
T Consensus       650 ~~r~~a~~~i~~L~~~gi~v~~~Tgd~~~~a~~ia~~lgi~~~~~~~--------------------------------~  697 (834)
T PRK10671        650 PLRSDSVAALQRLHKAGYRLVMLTGDNPTTANAIAKEAGIDEVIAGV--------------------------------L  697 (834)
T ss_pred             cchhhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCCEEEeCC--------------------------------C
Confidence            57889999999886   678899999999999999999997655431                                2


Q ss_pred             CCHHHHHHHHHHhCCCCCcEEEEeCChhcHHHHHHcCCeEEEECCCCC----CCCCceEeCCHhHHHHHHH
Q 027403          133 PSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP----VPPADHALNSIHNIKEAIP  199 (224)
Q Consensus       133 P~~~~~~~al~~~~~~~~~~l~VgDs~~Di~~A~~~G~~~v~v~~~~~----~~~~d~~i~~~~dl~~~i~  199 (224)
                      |.  --..++++++.++++++||||+.||+.+++++|+ .+.++.+..    ...+....+++..|.+++.
T Consensus       698 p~--~K~~~i~~l~~~~~~v~~vGDg~nD~~al~~Agv-gia~g~g~~~a~~~ad~vl~~~~~~~i~~~i~  765 (834)
T PRK10671        698 PD--GKAEAIKRLQSQGRQVAMVGDGINDAPALAQADV-GIAMGGGSDVAIETAAITLMRHSLMGVADALA  765 (834)
T ss_pred             HH--HHHHHHHHHhhcCCEEEEEeCCHHHHHHHHhCCe-eEEecCCCHHHHHhCCEEEecCCHHHHHHHHH
Confidence            22  1235777777788899999999999999999999 455554433    2334455678888888875

>TIGR01522 ATPase-IIA2_Ca golgi membrane calcium-translocating P-type ATPase

Probab=98.19  E-value=8.5e-06  Score=82.43  Aligned_cols=134  Identities=18%  Similarity=0.228  Sum_probs=94.0

Q ss_pred             CCChhHHHHHhcCC---CCeEEEeCCChHHHHHHHHHcCCccccceeEeeccCCCCCCCCCCCCCcccccCCccccccCC
Q 027403           56 KPDPVLRNLLLSMP---QRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCK  132 (224)
Q Consensus        56 ~~~~g~~~~L~~l~---~~~~I~Tn~~~~~~~~~l~~lgl~~~fd~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~K  132 (224)
                      ++.||++++++.|+   .+++++||.+...+....+.+|+...++.++++.+....       +.-+-.....+...-+.
T Consensus       528 p~r~~~~~~i~~l~~~Gi~v~miTGD~~~tA~~ia~~~Gi~~~~~~~v~g~~l~~~-------~~~~l~~~~~~~~Vfar  600 (884)
T TIGR01522       528 PPRPGVKEAVTTLITGGVRIIMITGDSQETAVSIARRLGMPSKTSQSVSGEKLDAM-------DDQQLSQIVPKVAVFAR  600 (884)
T ss_pred             cchhHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCCCCceeEhHHhHhC-------CHHHHHHHhhcCeEEEE
Confidence            67899999999996   688899999999999999999998877777766554321       00000000001111124


Q ss_pred             CCHHHHHHHHHHhCCCCCcEEEEeCChhcHHHHHHcCCeEEEECCC---CC--CCCCceEe--CCHhHHHHHHH
Q 027403          133 PSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSS---VP--VPPADHAL--NSIHNIKEAIP  199 (224)
Q Consensus       133 P~~~~~~~al~~~~~~~~~~l~VgDs~~Di~~A~~~G~~~v~v~~~---~~--~~~~d~~i--~~~~dl~~~i~  199 (224)
                      +.|+--..+++.++...+.|.||||+.||+.+.+++++   ++..|   ..  ...+|+++  +++..+...+.
T Consensus       601 ~~P~~K~~iv~~lq~~g~~v~mvGDGvND~pAl~~AdV---Gia~g~~g~~va~~aaDivl~dd~~~~i~~~i~  671 (884)
T TIGR01522       601 ASPEHKMKIVKALQKRGDVVAMTGDGVNDAPALKLADI---GVAMGQTGTDVAKEAADMILTDDDFATILSAIE  671 (884)
T ss_pred             CCHHHHHHHHHHHHHCCCEEEEECCCcccHHHHHhCCe---eEecCCCcCHHHHHhcCEEEcCCCHHHHHHHHH
Confidence            55555566667676666889999999999999999995   44443   22  34589998  66999888774

The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116.

>COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only]

Probab=98.14  E-value=4.4e-06  Score=67.68  Aligned_cols=94  Identities=24%  Similarity=0.368  Sum_probs=79.0

Q ss_pred             HHHHhcCCCCeEEEeCCChHHHHHHHHHcCCccccceeEeeccCCCCCCCCCCCCCcccccCCccccccCCCCHHHHHHH
Q 027403           62 RNLLLSMPQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCKPSLEAIETA  141 (224)
Q Consensus        62 ~~~L~~l~~~~~I~Tn~~~~~~~~~l~~lgl~~~fd~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~~~~~~~a  141 (224)
                      ..+|..+..+++|+|++....+....+.||+.++|.+                                .+-+...|+.+
T Consensus        44 ik~l~~~Gi~vAIITGr~s~ive~Ra~~LGI~~~~qG--------------------------------~~dK~~a~~~L   91 (170)
T COG1778          44 IKLLLKSGIKVAIITGRDSPIVEKRAKDLGIKHLYQG--------------------------------ISDKLAAFEEL   91 (170)
T ss_pred             HHHHHHcCCeEEEEeCCCCHHHHHHHHHcCCceeeec--------------------------------hHhHHHHHHHH
Confidence            4578888899999999999999999999999888865                                26688999999


Q ss_pred             HHHhCCCCCcEEEEeCChhcHHHHHHcCCeEEEECCCCC--CCCCceEe
Q 027403          142 IRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP--VPPADHAL  188 (224)
Q Consensus       142 l~~~~~~~~~~l~VgDs~~Di~~A~~~G~~~v~v~~~~~--~~~~d~~i  188 (224)
                      ++++++++++|.||||-.+|+-.-.+.|+. +.+.+.++  ...++|+.
T Consensus        92 ~~~~~l~~e~~ayiGDD~~Dlpvm~~vGls-~a~~dAh~~v~~~a~~Vt  139 (170)
T COG1778          92 LKKLNLDPEEVAYVGDDLVDLPVMEKVGLS-VAVADAHPLLKQRADYVT  139 (170)
T ss_pred             HHHhCCCHHHhhhhcCccccHHHHHHcCCc-ccccccCHHHHHhhHhhh
Confidence            999999999999999999999999999997 44544443  33355554

>PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional

Probab=98.13  E-value=1.5e-05  Score=68.81  Aligned_cols=69  Identities=22%  Similarity=0.233  Sum_probs=52.9

Q ss_pred             CCCHHHHHHHHHHhCCCCCcEEEEeCChhcHHHHHHcCCeEEEECCCCC--CCCCceEeCCHhH--HHHHHHHH
Q 027403          132 KPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP--VPPADHALNSIHN--IKEAIPEI  201 (224)
Q Consensus       132 KP~~~~~~~al~~~~~~~~~~l~VgDs~~Di~~A~~~G~~~v~v~~~~~--~~~~d~~i~~~~d--l~~~i~~~  201 (224)
                      -.++..+..+++.+|+++++|++|||+.||+..++.+|+ .+.+.++.+  ...+++++.+-.+  +.++|.++
T Consensus       198 ~~K~~~l~~l~~~~gi~~~e~i~~GD~~NDi~m~~~ag~-~vamgna~~~lk~~Ad~v~~~n~~dGv~~~l~~~  270 (272)
T PRK10530        198 NSKGKRLTQWVEAQGWSMKNVVAFGDNFNDISMLEAAGL-GVAMGNADDAVKARADLVIGDNTTPSIAEFIYSH  270 (272)
T ss_pred             CChHHHHHHHHHHcCCCHHHeEEeCCChhhHHHHHhcCc-eEEecCchHHHHHhCCEEEecCCCCcHHHHHHHH
Confidence            457789999999999999999999999999999999997 455555433  3457888765433  55555443

>TIGR00685 T6PP trehalose-phosphatase

Probab=97.92  E-value=3.3e-05  Score=66.55  Aligned_cols=67  Identities=13%  Similarity=0.164  Sum_probs=60.1

Q ss_pred             HHHHHHHHHHhCCCCCcEEEEeCChhcHHHHHHc-------CCeEEEECCCCCCCCCceEeCCHhHHHHHHHHH
Q 027403          135 LEAIETAIRIANVDPKKTIFFDDSARNIASAKAA-------GLHTVIVGSSVPVPPADHALNSIHNIKEAIPEI  201 (224)
Q Consensus       135 ~~~~~~al~~~~~~~~~~l~VgDs~~Di~~A~~~-------G~~~v~v~~~~~~~~~d~~i~~~~dl~~~i~~~  201 (224)
                      ..++..+++.++.++++++||||+.+|+.+++.+       |..++.|.++.....+++++++..++.+++..+
T Consensus       169 g~a~~~~~~~~~~~~~~~i~iGD~~~D~~~~~~~~~~~~~~g~~~v~v~~g~~~~~A~~~~~~~~~v~~~L~~l  242 (244)
T TIGR00685       169 GEIVKRLLWHQPGSGISPVYLGDDITDEDAFRVVNNQWGNYGFYPVPIGSGSKKTVAKFHLTGPQQVLEFLGLL  242 (244)
T ss_pred             HHHHHHHHHhcccCCCceEEEcCCCcHHHHHHHHhcccCCCCeEEEEEecCCcCCCceEeCCCHHHHHHHHHHH
Confidence            5899999999999999999999999999999988       778899977766778999999999999888654

At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes.

>TIGR01533 lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) family

Probab=97.87  E-value=0.00012  Score=64.55  Aligned_cols=98  Identities=13%  Similarity=0.203  Sum_probs=69.1

Q ss_pred             CCCCHHHHHHHHhccCCCCCCCCChhHHHHHhcCC---CCeEEEeCCCh---HHHHHHHHHcCCccc-cceeEeeccCCC
Q 027403           35 YEFDNDEFHAFVHGKLPYEKLKPDPVLRNLLLSMP---QRKIIFTNADQ---KHAMEVLGRLGLEDC-FEGIICFETINP  107 (224)
Q Consensus        35 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~L~~l~---~~~~I~Tn~~~---~~~~~~l~~lgl~~~-fd~ii~~~~~~~  107 (224)
                      ..++.+.+.+.+..    ....++||+.++|+.++   .+++++||++.   ..+...|+.+|+..+ ++.++.-++.  
T Consensus       101 ~~~~~~~w~~wv~~----~~a~~ipGA~e~L~~L~~~G~~v~iVTnR~~~~~~~T~~~Lkk~Gi~~~~~d~lllr~~~--  174 (266)
T TIGR01533       101 KPFDPETWDKWVQA----AQAKPVAGALDFLNYANSKGVKIFYVSNRSEKEKAATLKNLKRFGFPQADEEHLLLKKDK--  174 (266)
T ss_pred             CcCCHHHHHHHHHc----CCCCcCccHHHHHHHHHHCCCeEEEEeCCCcchHHHHHHHHHHcCcCCCCcceEEeCCCC--
Confidence            34445444444443    34678999999999885   67889999874   456688889999754 4556655431  


Q ss_pred             CCCCCCCCCCcccccCCccccccCCCCHHHHHHHHHHhCCCCCcEEEEeCChhcHHHHH
Q 027403          108 RLQPADNTDGIENNSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAK  166 (224)
Q Consensus       108 ~~~~~~~~~~~~~~~~~~~~~~~~KP~~~~~~~al~~~~~~~~~~l~VgDs~~Di~~A~  166 (224)
                                              ++++.-...+.+..++    +++|||..+|+.++.
T Consensus       175 ------------------------~~K~~rr~~I~~~y~I----vl~vGD~~~Df~~~~  205 (266)
T TIGR01533       175 ------------------------SSKESRRQKVQKDYEI----VLLFGDNLLDFDDFF  205 (266)
T ss_pred             ------------------------CCcHHHHHHHHhcCCE----EEEECCCHHHhhhhh
Confidence                                    5566777777776665    899999999997643

which in turn belongs to the haloacid dehalogenase (HAD) superfamily of aspartate-dependent hydrolases. Members are found on the outer membrane of Gram-negative bacteria and the cytoplasmic membrane of Gram-positive bacteria. Most members have classic lipoprotein signal sequences. A critical role of this 5'-nucleotidase in Haemophilus influenzae is the degradation of external riboside in order to allow transport into the cell. An earlier suggested role in hemin transport is no longer current. This enzyme may also have other physiologically significant roles.

>PRK01158 phosphoglycolate phosphatase; Provisional

Probab=97.80  E-value=9.1e-05  Score=62.42  Aligned_cols=69  Identities=19%  Similarity=0.237  Sum_probs=53.6

Q ss_pred             CCCCHHHHHHHHHHhCCCCCcEEEEeCChhcHHHHHHcCCeEEEECCCCC--CCCCceEeCCHhH--HHHHHHH
Q 027403          131 CKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP--VPPADHALNSIHN--IKEAIPE  200 (224)
Q Consensus       131 ~KP~~~~~~~al~~~~~~~~~~l~VgDs~~Di~~A~~~G~~~v~v~~~~~--~~~~d~~i~~~~d--l~~~i~~  200 (224)
                      +..+...+..+++.+|++++++++|||+.||+..++.+|+. +.+.++.+  ...++++..+-.+  +.+.|..
T Consensus       155 ~~~Kg~al~~l~~~~~i~~~~~i~~GD~~NDi~m~~~ag~~-vam~Na~~~vk~~a~~v~~~n~~~Gv~~~l~~  227 (230)
T PRK01158        155 GVNKGTGLKKLAELMGIDPEEVAAIGDSENDLEMFEVAGFG-VAVANADEELKEAADYVTEKSYGEGVAEAIEH  227 (230)
T ss_pred             CCChHHHHHHHHHHhCCCHHHEEEECCchhhHHHHHhcCce-EEecCccHHHHHhcceEecCCCcChHHHHHHH
Confidence            47789999999999999999999999999999999999995 66766654  3457777654332  4444443

>TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily

Probab=97.72  E-value=0.00012  Score=61.43  Aligned_cols=59  Identities=22%  Similarity=0.216  Sum_probs=49.5

Q ss_pred             CCCCHHHHHHHHHHhCCCCCcEEEEeCChhcHHHHHHcCCeEEEECCCCC--CCCCceEeCC
Q 027403          131 CKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP--VPPADHALNS  190 (224)
Q Consensus       131 ~KP~~~~~~~al~~~~~~~~~~l~VgDs~~Di~~A~~~G~~~v~v~~~~~--~~~~d~~i~~  190 (224)
                      +.++...+..+++.+|++++++++|||+.||+..++.+|.. +.+.+..+  ...++++..+
T Consensus       147 ~~~K~~~i~~l~~~~~i~~~~~i~~GD~~NDi~m~~~ag~~-vam~Na~~~~k~~A~~vt~~  207 (225)
T TIGR01482       147 GVNKGVAVKKLKEKLGIKPGETLVCGDSENDIDLFEVPGFG-VAVANAQPELKEWADYVTES  207 (225)
T ss_pred             CCCHHHHHHHHHHHhCCCHHHEEEECCCHhhHHHHHhcCce-EEcCChhHHHHHhcCeecCC
Confidence            47888899999999999999999999999999999999995 77776654  4457777644

catalyze the same reaction as SPP.

>PF05761 5_nucleotid: 5' nucleotidase family; InterPro: IPR008380 This family includes a 5'-nucleotidase, 3

Probab=97.58  E-value=0.00012  Score=68.94  Aligned_cols=126  Identities=17%  Similarity=0.140  Sum_probs=70.5

Q ss_pred             CCCCCChhHHHHHhcCC---CCeEEEeCCChHHHHHHHHHc---------CCccccceeEeeccCCCCCC-CCCCCCCcc
Q 027403           53 EKLKPDPVLRNLLLSMP---QRKIIFTNADQKHAMEVLGRL---------GLEDCFEGIICFETINPRLQ-PADNTDGIE  119 (224)
Q Consensus        53 ~~~~~~~g~~~~L~~l~---~~~~I~Tn~~~~~~~~~l~~l---------gl~~~fd~ii~~~~~~~~~~-~~~~~~~~~  119 (224)
                      ..+.+.|.+..+|++|+   .++.++|||+...+...+..+         ...++||-||+...-+..-. .+--+....
T Consensus       180 kYi~k~~~l~~~L~~lr~~GKklFLiTNS~~~yt~~~M~yl~g~~~~~~~dW~dlFDvVIv~A~KP~FF~~~~pfr~vd~  259 (448)
T PF05761_consen  180 KYIHKDPKLPPWLERLRSAGKKLFLITNSPFDYTNAVMSYLLGPFLGEDPDWRDLFDVVIVDARKPGFFTEGRPFREVDT  259 (448)
T ss_dssp             CCEE--CHHHHHHHHHHCCT-EEEEE-SS-HHHHHHHHHHHCGCCSSTTT-GGGCECEEEES--CCHHHCT---EEEEET
T ss_pred             HHccCCchHHHHHHHHHhcCceEEEecCCCCchhhhhhhhccCCCCCCCCChhhheeEEEEcCCCCcccCCCCceEEEEC
Confidence            34566789999999997   578899999999988888854         23578998887543221100 000000000


Q ss_pred             cccCCccc---cccCCC---CHHHHHHHHHHhCCCCCcEEEEeCCh-hcHHHHHHc-CCeEEEECCC
Q 027403          120 NNSFSSNQ---RILCKP---SLEAIETAIRIANVDPKKTIFFDDSA-RNIASAKAA-GLHTVIVGSS  178 (224)
Q Consensus       120 ~~~~~~~~---~~~~KP---~~~~~~~al~~~~~~~~~~l~VgDs~-~Di~~A~~~-G~~~v~v~~~  178 (224)
                      +.+.....   ..+.|.   .........+-+|+..++|++|||+. .||..+++. ||+|+.|-..
T Consensus       260 ~~g~l~~~~~~~~l~~g~vY~gGn~~~l~~ll~~~g~~VLY~GDhi~~Di~~~k~~~gWrT~~Ii~E  326 (448)
T PF05761_consen  260 ETGKLKWGKYVGPLEKGKVYSGGNWDQLHKLLGWRGKEVLYFGDHIYGDILKSKKRHGWRTAAIIPE  326 (448)
T ss_dssp             TTSSEECS---SS--TC-EEEE--HHHHHHHCT--GGGEEEEESSTTTTHHHHHHHH-SEEEEE-TT
T ss_pred             CCCccccccccccccCCCEeecCCHHHHHHHHccCCCeEEEECCchhhhhhhhccccceEEEEEehh
Confidence            00010000   011111   23455677788899999999999998 699888877 9999999554

1.3.5 from EC, specific for purines (IMP and GMP) []. These enzymes are members of the Haloacid Dehalogenase (HAD) superfamily. HAD members are recognised by three short motifs {hhhhDxDx(T/V)}, {hhhh(T/S)}, and either {hhhh(D/E)(D/E)x(3-4)(G/N)} or {hhhh(G/N)(D/E)x(3-4)(D/E)} (where "h" stands for a hydrophobic residue). Crystal structures of many HAD enzymes has verified PSI-PRED predictions of secondary structural elements which show each of the "hhhh" sequences of the motifs as part of beta sheets. This subfamily of enzymes is part of "Subfamily I" of the HAD superfamily by virtue of a "cap" domain in between motifs 1 and 2. This subfamily's cap domain has a different predicted secondary structure than all other known HAD enzymes and thus has been designated "subfamily IG", the domain appears to consist of a mixed alpha/beta fold.; PDB: 2BDE_A 2XCW_A 2XCX_A 2XCV_A 2XJB_A 2JCM_A 2XJE_A 2J2C_A 2XJF_A 2XJD_A ....

>KOG3120 consensus Predicted haloacid dehalogenase-like hydrolase [General function prediction only]

Probab=97.56  E-value=0.00018  Score=61.48  Aligned_cols=133  Identities=15%  Similarity=0.180  Sum_probs=85.6

Q ss_pred             CCCCHHHHHHHHhccCCCCCCCCChhHHHHHhcCC----CCeEEEeCCChHHHHHHHHHcCCccccceeEeeccCCCC--
Q 027403           35 YEFDNDEFHAFVHGKLPYEKLKPDPVLRNLLLSMP----QRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPR--  108 (224)
Q Consensus        35 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~L~~l~----~~~~I~Tn~~~~~~~~~l~~lgl~~~fd~ii~~~~~~~~--  108 (224)
                      .+.+.+++.+.+..      ++..||+.++++.+.    +.++|+|.++.-.+...|+++|+.++|..|.|.-.....  
T Consensus        69 qgv~~~~ik~~~r~------iP~~Pgmv~lik~~ak~g~~eliIVSDaNsfFIe~~Lea~~~~d~F~~IfTNPa~~da~G  142 (256)
T KOG3120|consen   69 QGVRIAEIKQVLRS------IPIVPGMVRLIKSAAKLGCFELIIVSDANSFFIEEILEAAGIHDLFSEIFTNPACVDASG  142 (256)
T ss_pred             cCCCHHHHHHHHhc------CCCCccHHHHHHHHHhCCCceEEEEecCchhHHHHHHHHccHHHHHHHHhcCCcccCCCC
Confidence            45577777776664      788899999998886    468899999999999999999999999988774322110  


Q ss_pred             CCCCCCCCCcccccCCccccccCCC---CHHHHHHHHH---HhCCCCCcEEEEeCChhcHHHHHHcCC-eEEEECCCCC
Q 027403          109 LQPADNTDGIENNSFSSNQRILCKP---SLEAIETAIR---IANVDPKKTIFFDDSARNIASAKAAGL-HTVIVGSSVP  180 (224)
Q Consensus       109 ~~~~~~~~~~~~~~~~~~~~~~~KP---~~~~~~~al~---~~~~~~~~~l~VgDs~~Di~~A~~~G~-~~v~v~~~~~  180 (224)
                      ++.-..     |+.  ++.|-++-|   +....+....   +-|+..++.+||||+.+|+.+-..... +.+...+|++
T Consensus       143 ~L~v~p-----yH~--~hsC~~CPsNmCKg~Vl~~~~~s~~~~gv~yer~iYvGDG~nD~CP~l~Lr~~D~ampRkgfp  214 (256)
T KOG3120|consen  143 RLLVRP-----YHT--QHSCNLCPSNMCKGLVLDELVASQLKDGVRYERLIYVGDGANDFCPVLRLRACDVAMPRKGFP  214 (256)
T ss_pred             cEEeec-----CCC--CCccCcCchhhhhhHHHHHHHHHHhhcCCceeeEEEEcCCCCCcCcchhcccCceecccCCCc
Confidence            000000     110  111111211   1223332222   236777899999999999988776644 4455555544

>COG4087 Soluble P-type ATPase [General function prediction only]

Probab=97.55  E-value=0.00067  Score=53.67  Aligned_cols=116  Identities=15%  Similarity=0.153  Sum_probs=88.5

Q ss_pred             CCCCCChhHHHHHhcCC--CCeEEEeCCChHHHHHHHHHcCCccccceeEeeccCCCCCCCCCCCCCcccccCCcccccc
Q 027403           53 EKLKPDPVLRNLLLSMP--QRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRIL  130 (224)
Q Consensus        53 ~~~~~~~g~~~~L~~l~--~~~~I~Tn~~~~~~~~~l~~lgl~~~fd~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  130 (224)
                      ..-++++.+.+.++.|.  .+++|+|+-....+....+-.|+.  .+.+..                             
T Consensus        27 tgGklf~ev~e~iqeL~d~V~i~IASgDr~gsl~~lae~~gi~--~~rv~a-----------------------------   75 (152)
T COG4087          27 TGGKLFSEVSETIQELHDMVDIYIASGDRKGSLVQLAEFVGIP--VERVFA-----------------------------   75 (152)
T ss_pred             cCcEEcHhhHHHHHHHHHhheEEEecCCcchHHHHHHHHcCCc--eeeeec-----------------------------
Confidence            34578888888888887  788899998888888888888864  121111                             


Q ss_pred             CCCCHHHHHHHHHHhCCCCCcEEEEeCChhcHHHHHHcCCeEEEECCCCC----CCCCceEeCCHhHHHHHHHH
Q 027403          131 CKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP----VPPADHALNSIHNIKEAIPE  200 (224)
Q Consensus       131 ~KP~~~~~~~al~~~~~~~~~~l~VgDs~~Di~~A~~~G~~~v~v~~~~~----~~~~d~~i~~~~dl~~~i~~  200 (224)
                       -.+++.=..+++.++-+-+.|++|||+.||+.+-+++.+-.+-+.+...    ...+|+++.++.++.+++..
T Consensus        76 -~a~~e~K~~ii~eLkk~~~k~vmVGnGaND~laLr~ADlGI~tiq~e~v~~r~l~~ADvvik~i~e~ldl~~~  148 (152)
T COG4087          76 -GADPEMKAKIIRELKKRYEKVVMVGNGANDILALREADLGICTIQQEGVPERLLLTADVVLKEIAEILDLLKD  148 (152)
T ss_pred             -ccCHHHHHHHHHHhcCCCcEEEEecCCcchHHHhhhcccceEEeccCCcchHHHhhchhhhhhHHHHHHHhhc
Confidence             2356666788888887678999999999999999999887666665432    24489999999998887653

>PRK11033 zntA zinc/cadmium/mercury/lead-transporting ATPase; Provisional

Probab=97.55  E-value=0.00058  Score=68.07  Aligned_cols=104  Identities=20%  Similarity=0.324  Sum_probs=74.5

Q ss_pred             CCChhHHHHHhcCC---CCeEEEeCCChHHHHHHHHHcCCccccceeEeeccCCCCCCCCCCCCCcccccCCccccccCC
Q 027403           56 KPDPVLRNLLLSMP---QRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCK  132 (224)
Q Consensus        56 ~~~~g~~~~L~~l~---~~~~I~Tn~~~~~~~~~l~~lgl~~~fd~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~K  132 (224)
                      ++.|++.+.++.|+   .+++++|+.+...+..+.+.+|+..++.      .                           .
T Consensus       568 ~~r~~a~~~i~~L~~~gi~~~llTGd~~~~a~~ia~~lgi~~~~~------~---------------------------~  614 (741)
T PRK11033        568 TLRADARQAISELKALGIKGVMLTGDNPRAAAAIAGELGIDFRAG------L---------------------------L  614 (741)
T ss_pred             CCchhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCeecC------C---------------------------C
Confidence            68899999999986   7788999999999999999999853221      1                           2


Q ss_pred             C--CHHHHHHHHHHhCCCCCcEEEEeCChhcHHHHHHcCCeEEEECCCCC--CCCCceEe--CCHhHHHHHH
Q 027403          133 P--SLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP--VPPADHAL--NSIHNIKEAI  198 (224)
Q Consensus       133 P--~~~~~~~al~~~~~~~~~~l~VgDs~~Di~~A~~~G~~~v~v~~~~~--~~~~d~~i--~~~~dl~~~i  198 (224)
                      |  ++.    ++++++ .+..|+||||+.||..+.+.+++. +.++.+..  ...+|+++  +++..|.+++
T Consensus       615 p~~K~~----~v~~l~-~~~~v~mvGDgiNDapAl~~A~vg-ia~g~~~~~a~~~adivl~~~~l~~l~~~i  680 (741)
T PRK11033        615 PEDKVK----AVTELN-QHAPLAMVGDGINDAPAMKAASIG-IAMGSGTDVALETADAALTHNRLRGLAQMI  680 (741)
T ss_pred             HHHHHH----HHHHHh-cCCCEEEEECCHHhHHHHHhCCee-EEecCCCHHHHHhCCEEEecCCHHHHHHHH
Confidence            2  222    444454 346899999999999999999953 34444432  23356654  6777777665

>TIGR02250 FCP1_euk FCP1-like phosphatase, phosphatase domain

Probab=97.54  E-value=0.00022  Score=57.92  Aligned_cols=79  Identities=18%  Similarity=0.263  Sum_probs=60.8

Q ss_pred             CCCCChhHHHHHhcCC--CCeEEEeCCChHHHHHHHHHcCCc-ccc-ceeEeeccCCCCCCCCCCCCCcccccCCccccc
Q 027403           54 KLKPDPVLRNLLLSMP--QRKIIFTNADQKHAMEVLGRLGLE-DCF-EGIICFETINPRLQPADNTDGIENNSFSSNQRI  129 (224)
Q Consensus        54 ~~~~~~g~~~~L~~l~--~~~~I~Tn~~~~~~~~~l~~lgl~-~~f-d~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  129 (224)
                      .+++.||+.++|+.++  ++++|+||+++..+..+++.++.. .+| +.+++.++....                 +   
T Consensus        56 ~v~~rPgv~efL~~l~~~yel~I~T~~~~~yA~~vl~~ldp~~~~F~~ri~~rd~~~~~-----------------~---  115 (156)
T TIGR02250        56 LTKLRPFLHEFLKEASKLYEMHVYTMGTRAYAQAIAKLIDPDGKYFGDRIISRDESGSP-----------------H---  115 (156)
T ss_pred             EEEECCCHHHHHHHHHhhcEEEEEeCCcHHHHHHHHHHhCcCCCeeccEEEEeccCCCC-----------------c---
Confidence            3678999999999997  789999999999999999999988 488 566776653211                 0   


Q ss_pred             cCCCCHHHHHHHHHHhCCCCCcEEEEeCChh
Q 027403          130 LCKPSLEAIETAIRIANVDPKKTIFFDDSAR  160 (224)
Q Consensus       130 ~~KP~~~~~~~al~~~~~~~~~~l~VgDs~~  160 (224)
                       .|-       +-+.++.+.+.+++|+|++.
T Consensus       116 -~Kd-------L~~i~~~d~~~vvivDd~~~  138 (156)
T TIGR02250       116 -TKS-------LLRLFPADESMVVIIDDRED  138 (156)
T ss_pred             -ccc-------HHHHcCCCcccEEEEeCCHH
Confidence             121       11345778899999999984

This domain is related to domains found in the human NLI interacting factor-like phosphatases, and together both are detected by the Pfam model pfam03031.

>TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal

Probab=97.47  E-value=0.00036  Score=58.52  Aligned_cols=57  Identities=18%  Similarity=0.206  Sum_probs=47.1

Q ss_pred             CCCHHHHHHHHHHhCCCCCcEEEEeCChhcHHHHHHcCCeEEEECCCCC--CCCCceEeC
Q 027403          132 KPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP--VPPADHALN  189 (224)
Q Consensus       132 KP~~~~~~~al~~~~~~~~~~l~VgDs~~Di~~A~~~G~~~v~v~~~~~--~~~~d~~i~  189 (224)
                      -.+...+..+++.+|++++++++|||+.||+..++.+|+. +.+.++.+  ...++++..
T Consensus       146 ~~K~~~i~~l~~~~~i~~~~~i~iGDs~ND~~ml~~ag~~-vam~na~~~~k~~A~~v~~  204 (215)
T TIGR01487       146 VDKGVGVEKLKELLGIKPEEVAAIGDSENDIDLFRVVGFK-VAVANADDQLKEIADYVTS  204 (215)
T ss_pred             CChHHHHHHHHHHhCCCHHHEEEECCCHHHHHHHHhCCCe-EEcCCccHHHHHhCCEEcC
Confidence            5677899999999999999999999999999999999986 66666543  344677664

TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases.

>TIGR01116 ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium-translocating P-type ATPase

Probab=97.46  E-value=0.00044  Score=70.44  Aligned_cols=136  Identities=13%  Similarity=0.167  Sum_probs=84.3

Q ss_pred             CCChhHHHHHhcCC---CCeEEEeCCChHHHHHHHHHcCCccc----cceeEeeccCCCCCCCCCCCCCcccccCCcccc
Q 027403           56 KPDPVLRNLLLSMP---QRKIIFTNADQKHAMEVLGRLGLEDC----FEGIICFETINPRLQPADNTDGIENNSFSSNQR  128 (224)
Q Consensus        56 ~~~~g~~~~L~~l~---~~~~I~Tn~~~~~~~~~l~~lgl~~~----fd~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~  128 (224)
                      ++.+++.+.++.|+   .+++++|+.....+....+.+|+..-    ....+++.+....       +.-+-.....+.+
T Consensus       537 plr~~v~e~I~~l~~aGI~v~miTGD~~~tA~~ia~~~gi~~~~~~v~~~~~~g~~l~~~-------~~~~~~~~~~~~~  609 (917)
T TIGR01116       537 PPRPEVADAIEKCRTAGIRVIMITGDNKETAEAICRRIGIFSPDEDVTFKSFTGREFDEM-------GPAKQRAACRSAV  609 (917)
T ss_pred             CCchhHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHcCCCCCCccccceeeeHHHHhhC-------CHHHHHHhhhcCe
Confidence            57889999999997   78889999998999999999998531    1112222111100       0000000000001


Q ss_pred             ccCCCCHHHHHHHHHHhCCCCCcEEEEeCChhcHHHHHHcCCeEEEECCCCC--CCCCceEeCC--HhHHHHHHH
Q 027403          129 ILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP--VPPADHALNS--IHNIKEAIP  199 (224)
Q Consensus       129 ~~~KP~~~~~~~al~~~~~~~~~~l~VgDs~~Di~~A~~~G~~~v~v~~~~~--~~~~d~~i~~--~~dl~~~i~  199 (224)
                      .-+.-.|.-=..+++.++...+.|.|+||+.||+.+.+.+++. +.++.+..  ...+|+++.+  +..+.+++.
T Consensus       610 v~ar~~P~~K~~iV~~lq~~g~~va~iGDG~ND~~alk~AdVG-ia~g~g~~~ak~aAD~vl~dd~f~~i~~~i~  683 (917)
T TIGR01116       610 LFSRVEPSHKSELVELLQEQGEIVAMTGDGVNDAPALKKADIG-IAMGSGTEVAKEASDMVLADDNFATIVAAVE  683 (917)
T ss_pred             EEEecCHHHHHHHHHHHHhcCCeEEEecCCcchHHHHHhCCee-EECCCCcHHHHHhcCeEEccCCHHHHHHHHH
Confidence            1112223333455556665567899999999999999999994 55555433  3458999877  888877663

The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1, the latter of which is modelled by TIGR01522.

>COG4359 Uncharacterized conserved protein [Function unknown]

Probab=97.44  E-value=0.00076  Score=56.30  Aligned_cols=138  Identities=13%  Similarity=0.106  Sum_probs=91.0

Q ss_pred             CCCCCChhHHHHHhcCC---CCeEEEeCCChHHHHHHHHHcCCccccce--eEeeccC-CCCCCCCCCCCCcccccCCcc
Q 027403           53 EKLKPDPVLRNLLLSMP---QRKIIFTNADQKHAMEVLGRLGLEDCFEG--IICFETI-NPRLQPADNTDGIENNSFSSN  126 (224)
Q Consensus        53 ~~~~~~~g~~~~L~~l~---~~~~I~Tn~~~~~~~~~l~~lgl~~~fd~--ii~~~~~-~~~~~~~~~~~~~~~~~~~~~  126 (224)
                      ..+++.||.+++.+.++   .+.+|+|++....+..++++++=.+-.+.  +++.++. ..--|   -.+..-+++    
T Consensus        70 k~i~Idp~fKef~e~ike~di~fiVvSsGm~~fI~~lfe~ivgke~i~~idi~sn~~~ih~dg~---h~i~~~~ds----  142 (220)
T COG4359          70 KDIKIDPGFKEFVEWIKEHDIPFIVVSSGMDPFIYPLFEGIVGKERIYCIDIVSNNDYIHIDGQ---HSIKYTDDS----  142 (220)
T ss_pred             hhcccCccHHHHHHHHHHcCCCEEEEeCCCchHHHHHHHhhccccceeeeEEeecCceEcCCCc---eeeecCCcc----
Confidence            34788999999999997   78999999999999999999874333332  2222211 11000   011111222    


Q ss_pred             ccccCCCCHHHHHHHHHHhCCCCCcEEEEeCChhcHHHHHHcCCeEEEECCC-----CCCCCCceEeCCHhHHHHHHHHH
Q 027403          127 QRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSS-----VPVPPADHALNSIHNIKEAIPEI  201 (224)
Q Consensus       127 ~~~~~KP~~~~~~~al~~~~~~~~~~l~VgDs~~Di~~A~~~G~~~v~v~~~-----~~~~~~d~~i~~~~dl~~~i~~~  201 (224)
                      +....||      ..++.+.-+++.++|+|||..|+.+|+...+-  +..+.     ..+.-...-+.++.|+..-+.++
T Consensus       143 ~fG~dK~------~vI~~l~e~~e~~fy~GDsvsDlsaaklsDll--FAK~~L~nyc~eqn~~f~~fe~F~eIlk~iekv  214 (220)
T COG4359         143 QFGHDKS------SVIHELSEPNESIFYCGDSVSDLSAAKLSDLL--FAKDDLLNYCREQNLNFLEFETFYEILKEIEKV  214 (220)
T ss_pred             ccCCCcc------hhHHHhhcCCceEEEecCCcccccHhhhhhhH--hhHHHHHHHHHHcCCCCcccccHHHHHHHHHHH
Confidence            2333566      35667777788899999999999999987653  22221     11344566788999999988888


Q ss_pred             Hhhc
Q 027403          202 WEGE  205 (224)
Q Consensus       202 ~~~~  205 (224)
                      ++..
T Consensus       215 l~~~  218 (220)
T COG4359         215 LEVQ  218 (220)
T ss_pred             Hhhh
Confidence            8764

>PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B

Probab=97.39  E-value=0.00041  Score=56.36  Aligned_cols=95  Identities=19%  Similarity=0.274  Sum_probs=59.1

Q ss_pred             hhHHHHHhcC---CCCeEEEeCCChHHHHHHHHHcCCccccceeEeeccCCCCCCCCCCCCCcccccCCccccccCCCCH
Q 027403           59 PVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCKPSL  135 (224)
Q Consensus        59 ~g~~~~L~~l---~~~~~I~Tn~~~~~~~~~l~~lgl~~~fd~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~~  135 (224)
                      |++.++|+.+   +.+++|+|+++...+..+++.+|+...+  +++++. ...      -.+.......+..  .+ -+.
T Consensus        92 ~~~~e~i~~~~~~~~~v~IvS~~~~~~i~~~~~~~~i~~~~--v~~~~~-~~~------~~~~~~~~~~~~~--~~-~K~  159 (192)
T PF12710_consen   92 PDAMELIRELKDNGIKVVIVSGSPDEIIEPIAERLGIDDDN--VIGNEL-FDN------GGGIFTGRITGSN--CG-GKA  159 (192)
T ss_dssp             TTHHHHHHHHHHTTSEEEEEEEEEHHHHHHHHHHTTSSEGG--EEEEEE-ECT------TCCEEEEEEEEEE--ES-HHH
T ss_pred             hhHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCCceE--EEEEee-eec------ccceeeeeECCCC--CC-cHH
Confidence            6677999776   4889999999999999999999975322  343332 100      0000000001000  00 145


Q ss_pred             HHHHHH---HHHhCCCCCcEEEEeCChhcHHHHH
Q 027403          136 EAIETA---IRIANVDPKKTIFFDDSARNIASAK  166 (224)
Q Consensus       136 ~~~~~a---l~~~~~~~~~~l~VgDs~~Di~~A~  166 (224)
                      .....+   ... +..+..+++||||.+|+..++
T Consensus       160 ~~l~~~~~~~~~-~~~~~~~~~iGDs~~D~~~lr  192 (192)
T PF12710_consen  160 EALKELYIRDEE-DIDPDRVIAIGDSINDLPMLR  192 (192)
T ss_dssp             HHHHHHHHHHHH-THTCCEEEEEESSGGGHHHHH
T ss_pred             HHHHHHHHHhhc-CCCCCeEEEEECCHHHHHHhC
Confidence            555555   333 788999999999999998764

>TIGR01684 viral_ppase viral phosphatase

Probab=97.37  E-value=0.00027  Score=62.94  Aligned_cols=101  Identities=21%  Similarity=0.251  Sum_probs=70.2

Q ss_pred             ChhHHHHHhcCC---CCeEEEeCCChHHHHHHHHHcCCccccceeEeeccCCCCCCCCCCCCC----cc-cccCCccc--
Q 027403           58 DPVLRNLLLSMP---QRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDG----IE-NNSFSSNQ--  127 (224)
Q Consensus        58 ~~g~~~~L~~l~---~~~~I~Tn~~~~~~~~~l~~lgl~~~fd~ii~~~~~~~~~~~~~~~~~----~~-~~~~~~~~--  127 (224)
                      .||+.++|+.|+   .+++|+||+++.++...++++|+..+|+.|+++++....+..+..-|-    ++ ...|.-..  
T Consensus       148 dPgV~EaL~~LkekGikLaIaTS~~Re~v~~~L~~lGLd~YFdvIIs~Gdv~~~kp~~e~~d~~~~~~~~~~~f~~d~~~  227 (301)
T TIGR01684       148 DPRIYDSLTELKKRGCILVLWSYGDRDHVVESMRKVKLDRYFDIIISGGHKAEEYSTMSTEDRQYRYVFTKTPFYLNTTD  227 (301)
T ss_pred             CHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHcCCCcccCEEEECCccccCCCCccccccccceEEecCCeEEeCCC
Confidence            499999999997   467899999999999999999999999999999988765432211111    11 11111110  


Q ss_pred             -cccCCCCHHHHHHHHHHhCCC-CCcEEEEeCCh
Q 027403          128 -RILCKPSLEAIETAIRIANVD-PKKTIFFDDSA  159 (224)
Q Consensus       128 -~~~~KP~~~~~~~al~~~~~~-~~~~l~VgDs~  159 (224)
                       .-++| +|......+++.|+. .+.+-.|+|-.
T Consensus       228 ~~~lPK-Sprvvl~yL~~~gvn~~KtitLVDDl~  260 (301)
T TIGR01684       228 GKRLPK-SPRVVLWYLYDLGVNYFKSITLVDDLA  260 (301)
T ss_pred             CCcCCC-CCeehHHHHHHcCCceeeeEEEeccCc
Confidence             01112 477778888888886 46677888876

These proteins also include an N-terminal domain (ca. 125 aas) that is unique to this clade.

>PLN02645 phosphoglycolate phosphatase

Probab=97.28  E-value=0.0008  Score=60.18  Aligned_cols=88  Identities=15%  Similarity=0.108  Sum_probs=66.3

Q ss_pred             CCCChhHHHHHhcCC---CCeEEEeCCC---hHHHHHHHHHcCCccccceeEeeccCCCCCCCCCCCCCcccccCCcccc
Q 027403           55 LKPDPVLRNLLLSMP---QRKIIFTNAD---QKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQR  128 (224)
Q Consensus        55 ~~~~~g~~~~L~~l~---~~~~I~Tn~~---~~~~~~~l~~lgl~~~fd~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~  128 (224)
                      -.++||+.++|+.|+   ++++++||++   ...+...++.+|+...++.|+++...                       
T Consensus        43 ~~~~~ga~e~l~~lr~~g~~~~~~TN~~~~~~~~~~~~l~~lGi~~~~~~I~ts~~~-----------------------   99 (311)
T PLN02645         43 DKLIEGVPETLDMLRSMGKKLVFVTNNSTKSRAQYGKKFESLGLNVTEEEIFSSSFA-----------------------   99 (311)
T ss_pred             CccCcCHHHHHHHHHHCCCEEEEEeCCCCCCHHHHHHHHHHCCCCCChhhEeehHHH-----------------------
Confidence            368899999999886   7788999988   45555667889987777777766532                       


Q ss_pred             ccCCCCHHHHHHHHHHhCCCCCcEEEEeCChhcHHHHHHcCCeEEE
Q 027403          129 ILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVI  174 (224)
Q Consensus       129 ~~~KP~~~~~~~al~~~~~~~~~~l~VgDs~~Di~~A~~~G~~~v~  174 (224)
                               ....++..+....+.+||+++..+...+.++|+.++.
T Consensus       100 ---------~~~~l~~~~~~~~~~V~viG~~~~~~~l~~~Gi~~~~  136 (311)
T PLN02645        100 ---------AAAYLKSINFPKDKKVYVIGEEGILEELELAGFQYLG  136 (311)
T ss_pred             ---------HHHHHHhhccCCCCEEEEEcCHHHHHHHHHCCCEEec
Confidence                     2345555565445568888888999999999998754

>TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase

Probab=97.21  E-value=0.0022  Score=55.16  Aligned_cols=49  Identities=18%  Similarity=0.276  Sum_probs=45.0

Q ss_pred             CCCCHHHHHHHHHHhCCCCCcEEEEeCChhcHHHHHHcCCeEEEECCCC
Q 027403          131 CKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSV  179 (224)
Q Consensus       131 ~KP~~~~~~~al~~~~~~~~~~l~VgDs~~Di~~A~~~G~~~v~v~~~~  179 (224)
                      +.++..+...+++.+++++++|++|||+.||+..++.++..++.+.++.
T Consensus       165 ~~~K~~al~~l~~~~~i~~~~~i~~GD~~ND~~ml~~~~~~~va~~na~  213 (249)
T TIGR01485       165 GSGKGQALQYLLQKLAMEPSQTLVCGDSGNDIELFEIGSVRGVIVSNAQ  213 (249)
T ss_pred             CCChHHHHHHHHHHcCCCccCEEEEECChhHHHHHHccCCcEEEECCCH
Confidence            4899999999999999999999999999999999999787788887764

Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.

>KOG1615 consensus Phosphoserine phosphatase [Amino acid transport and metabolism]

Probab=97.21  E-value=0.00095  Score=56.17  Aligned_cols=102  Identities=18%  Similarity=0.204  Sum_probs=68.3

Q ss_pred             CCCCCChhHHHHHhcCC---CCeEEEeCCChHHHHHHHHHcCCcc--ccceeEeeccCCCCCCCCCCCCCcccccCCccc
Q 027403           53 EKLKPDPVLRNLLLSMP---QRKIIFTNADQKHAMEVLGRLGLED--CFEGIICFETINPRLQPADNTDGIENNSFSSNQ  127 (224)
Q Consensus        53 ~~~~~~~g~~~~L~~l~---~~~~I~Tn~~~~~~~~~l~~lgl~~--~fd~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~  127 (224)
                      ....+-||++++..+|+   .+++++|++.+..+..+-+.||+.-  .|....-.+..+.+    +-+|.-..-+.+   
T Consensus        85 ~k~~lT~Gi~eLv~~L~~~~~~v~liSGGF~~~i~~Va~~Lgi~~~n~yAN~l~fd~~Gk~----~gfd~~~ptsds---  157 (227)
T KOG1615|consen   85 QKPTLTPGIRELVSRLHARGTQVYLISGGFRQLIEPVAEQLGIPKSNIYANELLFDKDGKY----LGFDTNEPTSDS---  157 (227)
T ss_pred             CCCccCCCHHHHHHHHHHcCCeEEEEcCChHHHHHHHHHHhCCcHhhhhhheeeeccCCcc----cccccCCccccC---
Confidence            45678899999999997   6788999999999999999999863  44443333332221    111111111111   


Q ss_pred             cccCCCCHHHHHHHHHHhCCCCCcEEEEeCChhcHHHHHH
Q 027403          128 RILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKA  167 (224)
Q Consensus       128 ~~~~KP~~~~~~~al~~~~~~~~~~l~VgDs~~Di~~A~~  167 (224)
                          --++.......+  +.+-+.+.||||+.+|+.+..-
T Consensus       158 ----ggKa~~i~~lrk--~~~~~~~~mvGDGatDlea~~p  191 (227)
T KOG1615|consen  158 ----GGKAEVIALLRK--NYNYKTIVMVGDGATDLEAMPP  191 (227)
T ss_pred             ----CccHHHHHHHHh--CCChheeEEecCCccccccCCc
Confidence                224455555544  8888999999999999987655

>TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein

Probab=97.17  E-value=0.0019  Score=54.18  Aligned_cols=40  Identities=15%  Similarity=0.043  Sum_probs=35.9

Q ss_pred             CCHHHHHHHHHHhCCCCCcEEEEeCChhcHHHHHHcCCeE
Q 027403          133 PSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHT  172 (224)
Q Consensus       133 P~~~~~~~al~~~~~~~~~~l~VgDs~~Di~~A~~~G~~~  172 (224)
                      .+......+++.+|+++++|++|||+.||+...+.+|...
T Consensus       179 ~Kg~al~~l~~~lgi~~~~vi~~GD~~NDi~ml~~ag~~v  218 (221)
T TIGR02463       179 SKGKAANWLKATYNQPDVKTLGLGDGPNDLPLLEVADYAV  218 (221)
T ss_pred             CHHHHHHHHHHHhCCCCCcEEEECCCHHHHHHHHhCCceE
Confidence            3555789999999999999999999999999999999864

This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate.

>PHA03398 viral phosphatase superfamily protein; Provisional

Probab=96.98  E-value=0.0025  Score=56.88  Aligned_cols=101  Identities=21%  Similarity=0.223  Sum_probs=70.0

Q ss_pred             ChhHHHHHhcCC---CCeEEEeCCChHHHHHHHHHcCCccccceeEeeccCCCCCCCCCCCC----Ccc-cccCCcccc-
Q 027403           58 DPVLRNLLLSMP---QRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTD----GIE-NNSFSSNQR-  128 (224)
Q Consensus        58 ~~g~~~~L~~l~---~~~~I~Tn~~~~~~~~~l~~lgl~~~fd~ii~~~~~~~~~~~~~~~~----~~~-~~~~~~~~~-  128 (224)
                      .|++.++|+.|+   .+++|+||+++.++...++.+|+.++|+.++|+++.......+...|    .++ ...|+-..- 
T Consensus       150 dp~V~EtL~eLkekGikLaIvTNg~Re~v~~~Le~lgL~~yFDvII~~g~i~~k~~~~~~~d~~~~~~~~~~~f~~d~~~  229 (303)
T PHA03398        150 DPFVYDSLDELKERGCVLVLWSYGNREHVVHSLKETKLEGYFDIIICGGRKAGEYSRRVIVDNKYKMVFVKKPFYLDVTD  229 (303)
T ss_pred             ChhHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHcCCCccccEEEECCCcccccccceeecccceeEEecCceeEeCCc
Confidence            489999999997   56789999999999999999999999999999887654321121111    111 111111000 


Q ss_pred             --ccCCCCHHHHHHHHHHhCCC-CCcEEEEeCCh
Q 027403          129 --ILCKPSLEAIETAIRIANVD-PKKTIFFDDSA  159 (224)
Q Consensus       129 --~~~KP~~~~~~~al~~~~~~-~~~~l~VgDs~  159 (224)
                        -++| +|......+++.|+. .+.+-.|+|-.
T Consensus       230 ~~~lPK-SprvVl~yL~~~gvn~~KtiTLVDDl~  262 (303)
T PHA03398        230 VKNLPK-SPRVVLWYLRKKGVNYFKTITLVDDLK  262 (303)
T ss_pred             ccCCCC-CCeehHHHHHHcCcceeccEEEeccCc
Confidence              1112 578888899999986 46688899886

>PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed

Probab=96.93  E-value=0.0082  Score=52.34  Aligned_cols=70  Identities=19%  Similarity=0.185  Sum_probs=50.7

Q ss_pred             CCHHHHHHHHHHhCCCC-CcEEEEeCChhcHHHHHHcCCeEEEECCCCCC-C----CC--ceEe--CC--HhHHHHHHHH
Q 027403          133 PSLEAIETAIRIANVDP-KKTIFFDDSARNIASAKAAGLHTVIVGSSVPV-P----PA--DHAL--NS--IHNIKEAIPE  200 (224)
Q Consensus       133 P~~~~~~~al~~~~~~~-~~~l~VgDs~~Di~~A~~~G~~~v~v~~~~~~-~----~~--d~~i--~~--~~dl~~~i~~  200 (224)
                      .+......+++.+++++ +++++|||+.||+..++.+|.. +.+.++.+. .    ..  +++.  ++  =.-+.+.|..
T Consensus       190 ~Kg~al~~l~~~~~i~~~~~v~~~GDs~NDi~m~~~ag~~-vam~NA~~~~k~~~~~~a~~~v~~~~~~~~~Gv~~~l~~  268 (273)
T PRK00192        190 DKGKAVRWLKELYRRQDGVETIALGDSPNDLPMLEAADIA-VVVPGPDGPNPPLLPGIADGEFILASAPGPEGWAEAINK  268 (273)
T ss_pred             CHHHHHHHHHHHHhccCCceEEEEcCChhhHHHHHhCCee-EEeCCCCCCCcccCccccCCceEEecCCCcHHHHHHHHH
Confidence            45668899999999999 9999999999999999999975 666665432 2    22  3544  22  3356666665


Q ss_pred             HHh
Q 027403          201 IWE  203 (224)
Q Consensus       201 ~~~  203 (224)
                      ++.
T Consensus       269 ~~~  271 (273)
T PRK00192        269 LLS  271 (273)
T ss_pred             HHh
Confidence            554

>PF06941 NT5C: 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C); InterPro: IPR010708 This family consists of several 5' nucleotidase, deoxy (Pyrimidine), and cytosolic type C (NT5C) proteins

Probab=96.92  E-value=0.0013  Score=54.42  Aligned_cols=118  Identities=17%  Similarity=0.227  Sum_probs=71.1

Q ss_pred             HHHHHHhccCCCCCCCCChhHHHHHhcCCC---CeEEEeCCChH-------HHHHHHHHc-CCccccceeEeeccCCCCC
Q 027403           41 EFHAFVHGKLPYEKLKPDPVLRNLLLSMPQ---RKIIFTNADQK-------HAMEVLGRL-GLEDCFEGIICFETINPRL  109 (224)
Q Consensus        41 ~~~~~~~~~~~~~~~~~~~g~~~~L~~l~~---~~~I~Tn~~~~-------~~~~~l~~l-gl~~~fd~ii~~~~~~~~~  109 (224)
                      .+...+...--+..++|.||+.++|++|..   ..+++|.++..       .....+++. |. .+++.++.+.+     
T Consensus        58 ~~~~~~~~~~~f~~l~p~~gA~e~l~~L~~~g~~~~~Itar~~~~~~~~~~~k~~Wl~~hf~~-i~~~~~~~~~~-----  131 (191)
T PF06941_consen   58 KLWRFYEEPGFFSNLPPIPGAVEALKKLRDKGHEIVIITARPPEFPDHSAEEKREWLERHFPF-IPYDNLIFTGD-----  131 (191)
T ss_dssp             HHHHHHTSTTTTTT--B-TTHHHHHHHHHTSTTEEEEEEE-SSSSGCCCHHHHHHHHHHHHTH-HHHCCEEEESS-----
T ss_pred             HHHHHHhChhhhcCCCccHHHHHHHHHHHHcCCcEEEEEecCccccchHHHHHHHHHHHHcCC-CchheEEEecC-----
Confidence            344444433335678999999999999972   57777776543       334445443 32 12344444322     


Q ss_pred             CCCCCCCCcccccCCccccccCCCCHHHHHHHHHHhCCCCCcEEEEeCChhcHHHHHHcCCeEEEECCCCCCCC-CceEe
Q 027403          110 QPADNTDGIENNSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVPVPP-ADHAL  188 (224)
Q Consensus       110 ~~~~~~~~~~~~~~~~~~~~~~KP~~~~~~~al~~~~~~~~~~l~VgDs~~Di~~A~~~G~~~v~v~~~~~~~~-~d~~i  188 (224)
                                            |-          .++.  +  ++|+|++.++..+...|++.+.+.++..+.. .-..+
T Consensus       132 ----------------------K~----------~v~~--D--vlIDD~~~n~~~~~~~g~~~iLfd~p~Nr~~~~~~Rv  175 (191)
T PF06941_consen  132 ----------------------KT----------LVGG--D--VLIDDRPHNLEQFANAGIPVILFDQPYNRDESNFPRV  175 (191)
T ss_dssp             ----------------------GG----------GC----S--EEEESSSHHHSS-SSESSEEEEE--GGGTT--TSEEE
T ss_pred             ----------------------CC----------eEec--c--EEecCChHHHHhccCCCceEEEEcCCCCCCCCCCccC
Confidence                                  31          1122  2  8999999999999999999999998866433 46789


Q ss_pred             CCHhHHHHHHHH
Q 027403          189 NSIHNIKEAIPE  200 (224)
Q Consensus       189 ~~~~dl~~~i~~  200 (224)
                      +|..|+.+.|..
T Consensus       176 ~~W~ei~~~i~~  187 (191)
T PF06941_consen  176 NNWEEIEDLILS  187 (191)
T ss_dssp             -STTSHHHHHHH
T ss_pred             CCHHHHHHHHHh
Confidence            999999988754

5'(3')-deoxyribonucleotidase is a ubiquitous enzyme in mammalian cells whose physiological function is not known [].; GO: 0016791 phosphatase activity; PDB: 1Z4M_A 1Q92_A 1Q91_A 1Z4J_A 1Z4I_A 1Z4Q_A 1Z4K_A 2JAW_A 1MH9_A 1Z4L_A ....

>KOG2630 consensus Enolase-phosphatase E-1 [Amino acid transport and metabolism]

Probab=96.81  E-value=0.0056  Score=52.72  Aligned_cols=115  Identities=17%  Similarity=0.208  Sum_probs=87.0

Q ss_pred             CCChhHHHHHhcCC---CCeEEEeCCChHHHHHHHHHcCC---ccccceeEeeccCCCCCCCCCCCCCcccccCCccccc
Q 027403           56 KPDPVLRNLLLSMP---QRKIIFTNADQKHAMEVLGRLGL---EDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRI  129 (224)
Q Consensus        56 ~~~~g~~~~L~~l~---~~~~I~Tn~~~~~~~~~l~~lgl---~~~fd~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  129 (224)
                      ..++++.+++++.+   .+++|.|.++......++.+-+-   ..++++.+-. .++                       
T Consensus       123 ~v~aDv~~a~e~w~~~g~~vyIYSSgsv~AqKllfg~s~~gdl~~y~~gyfDt-~iG-----------------------  178 (254)
T KOG2630|consen  123 HVYADVLPAIERWSGEGVRVYIYSSGSVAAQKLLFGYSDAGDLRKYISGYFDT-TIG-----------------------  178 (254)
T ss_pred             cccchhHHHHHHHhhcCceEEEEcCCcHHHHHHHHcccCcchHHHHhhhhhhc-ccc-----------------------
Confidence            67899999999997   67889999998877777776532   2223222111 222                       


Q ss_pred             cCCCCHHHHHHHHHHhCCCCCcEEEEeCChhcHHHHHHcCCeEEEECCCCCCCC---C---ceEeCCHhHHH
Q 027403          130 LCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVPVPP---A---DHALNSIHNIK  195 (224)
Q Consensus       130 ~~KP~~~~~~~al~~~~~~~~~~l~VgDs~~Di~~A~~~G~~~v~v~~~~~~~~---~---d~~i~~~~dl~  195 (224)
                       .|-...+|..+.+..+.++.+++|.-|-++-..+|+++|+.+..+.+|...+-   +   --++.+|..|.
T Consensus       179 -~K~e~~sy~~I~~~Ig~s~~eiLfLTd~~~Ea~aa~~aGl~a~l~~rPgna~l~dd~~~~y~~i~~F~~l~  249 (254)
T KOG2630|consen  179 -LKVESQSYKKIGHLIGKSPREILFLTDVPREAAAARKAGLQAGLVSRPGNAPLPDDAKVEYCVIWSFEILE  249 (254)
T ss_pred             -ceehhHHHHHHHHHhCCChhheEEeccChHHHHHHHhcccceeeeecCCCCCCCcccccceeeeccchhhh
Confidence             28899999999999999999999999999999999999999999988865211   1   22566776654

>PRK10513 sugar phosphate phosphatase; Provisional

Probab=96.65  E-value=0.0035  Score=54.13  Aligned_cols=71  Identities=18%  Similarity=0.239  Sum_probs=55.8

Q ss_pred             CCCCHHHHHHHHHHhCCCCCcEEEEeCChhcHHHHHHcCCeEEEECCCCC--CCCCceEeCCHh--HHHHHHHHHH
Q 027403          131 CKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP--VPPADHALNSIH--NIKEAIPEIW  202 (224)
Q Consensus       131 ~KP~~~~~~~al~~~~~~~~~~l~VgDs~~Di~~A~~~G~~~v~v~~~~~--~~~~d~~i~~~~--dl~~~i~~~~  202 (224)
                      +-.+......+++.+|+++++++.|||+.||+..-+.+|. .+.+.++.+  ...++++..+-.  -+.+.|..++
T Consensus       194 gvsKg~al~~l~~~~gi~~~~v~afGD~~NDi~Ml~~ag~-~vAm~NA~~~vK~~A~~vt~~n~~dGva~~i~~~~  268 (270)
T PRK10513        194 RVNKGTGVKSLAEHLGIKPEEVMAIGDQENDIAMIEYAGV-GVAMGNAIPSVKEVAQFVTKSNLEDGVAFAIEKYV  268 (270)
T ss_pred             CCChHHHHHHHHHHhCCCHHHEEEECCchhhHHHHHhCCc-eEEecCccHHHHHhcCeeccCCCcchHHHHHHHHh
Confidence            4678899999999999999999999999999999999998 477777654  455788775532  2555555443

>TIGR01497 kdpB K+-transporting ATPase, B subunit

Probab=96.57  E-value=0.013  Score=58.00  Aligned_cols=108  Identities=14%  Similarity=0.182  Sum_probs=74.4

Q ss_pred             CCChhHHHHHhcCC---CCeEEEeCCChHHHHHHHHHcCCccccceeEeeccCCCCCCCCCCCCCcccccCCccccccCC
Q 027403           56 KPDPVLRNLLLSMP---QRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCK  132 (224)
Q Consensus        56 ~~~~g~~~~L~~l~---~~~~I~Tn~~~~~~~~~l~~lgl~~~fd~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~K  132 (224)
                      ++.|++++.++.|+   .+++++|+.....+...-+.+|+.++|..                                ..
T Consensus       446 ~~Rp~a~eaI~~l~~~Gi~v~miTGD~~~ta~~iA~~lGI~~v~a~--------------------------------~~  493 (675)
T TIGR01497       446 IVKGGIKERFAQLRKMGIKTIMITGDNRLTAAAIAAEAGVDDFIAE--------------------------------AT  493 (675)
T ss_pred             cchhHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCEEEcC--------------------------------CC
Confidence            57789999999996   67889999999999999999998654421                                13


Q ss_pred             CCHHHHHHHHHHhCCCCCcEEEEeCChhcHHHHHHcCCeEEEECCCCC--CCCCceEe--CCHhHHHHHH
Q 027403          133 PSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP--VPPADHAL--NSIHNIKEAI  198 (224)
Q Consensus       133 P~~~~~~~al~~~~~~~~~~l~VgDs~~Di~~A~~~G~~~v~v~~~~~--~~~~d~~i--~~~~dl~~~i  198 (224)
                      |..  =...++.++-....|.|+||+.||..+-+.++.. +.++.+..  ..-+|+++  +|+..|.+++
T Consensus       494 Ped--K~~~v~~lq~~g~~VamvGDG~NDapAL~~AdvG-iAm~~gt~~akeaadivLldd~~s~Iv~av  560 (675)
T TIGR01497       494 PED--KIALIRQEQAEGKLVAMTGDGTNDAPALAQADVG-VAMNSGTQAAKEAANMVDLDSDPTKLIEVV  560 (675)
T ss_pred             HHH--HHHHHHHHHHcCCeEEEECCCcchHHHHHhCCEe-EEeCCCCHHHHHhCCEEECCCCHHHHHHHH
Confidence            331  1122233332345799999999999999999885 55655543  33356654  3455555554

One sequence is apparently mis-annotated in the primary literature, but properly annotated by TIGR.

>PRK10187 trehalose-6-phosphate phosphatase; Provisional

Probab=96.56  E-value=0.016  Score=50.82  Aligned_cols=72  Identities=19%  Similarity=0.191  Sum_probs=58.9

Q ss_pred             CCCCHHHHHHHHHHhCCCCCcEEEEeCChhcHHHHHHc---CCeEEEECCCCCCCCCceEeCCHhHHHHHHHHHHhh
Q 027403          131 CKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAA---GLHTVIVGSSVPVPPADHALNSIHNIKEAIPEIWEG  204 (224)
Q Consensus       131 ~KP~~~~~~~al~~~~~~~~~~l~VgDs~~Di~~A~~~---G~~~v~v~~~~~~~~~d~~i~~~~dl~~~i~~~~~~  204 (224)
                      +--+......+++.++++.++++++||+.+|+..-+.+   +-.+|.|+.+  ...+.+.+++..++..++..+...
T Consensus       172 g~~Kg~al~~ll~~~~~~~~~v~~~GD~~nD~~mf~~~~~~~g~~vavg~a--~~~A~~~l~~~~~v~~~L~~l~~~  246 (266)
T PRK10187        172 GTNKGEAIAAFMQEAPFAGRTPVFVGDDLTDEAGFAVVNRLGGISVKVGTG--ATQASWRLAGVPDVWSWLEMITTA  246 (266)
T ss_pred             CCCHHHHHHHHHHhcCCCCCeEEEEcCCccHHHHHHHHHhcCCeEEEECCC--CCcCeEeCCCHHHHHHHHHHHHHh
Confidence            34567888889999999999999999999998777666   4566778655  477999999999999999887743

>PRK11590 hypothetical protein; Provisional

Probab=96.52  E-value=0.02  Score=48.13  Aligned_cols=100  Identities=11%  Similarity=-0.016  Sum_probs=66.3

Q ss_pred             CCCChhHHHHH-hcCC---CCeEEEeCCChHHHHHHHHHcCCccccceeEeeccCCCCCCCCCCCCCcc--cccCCcccc
Q 027403           55 LKPDPVLRNLL-LSMP---QRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIE--NNSFSSNQR  128 (224)
Q Consensus        55 ~~~~~g~~~~L-~~l~---~~~~I~Tn~~~~~~~~~l~~lgl~~~fd~ii~~~~~~~~~~~~~~~~~~~--~~~~~~~~~  128 (224)
                      ..++||+.+.| +.++   .+++|+||++...+...+..+|+.. .+.+++++-...       +.|-.  .+|.+    
T Consensus        94 ~~~~pga~e~L~~~l~~~G~~l~IvSas~~~~~~~il~~l~~~~-~~~~i~t~l~~~-------~tg~~~g~~c~g----  161 (211)
T PRK11590         94 VTAFPVVQERLTTYLLSSDADVWLITGSPQPLVEQVYFDTPWLP-RVNLIASQMQRR-------YGGWVLTLRCLG----  161 (211)
T ss_pred             CcCCccHHHHHHHHHHhCCCEEEEEeCCcHHHHHHHHHHccccc-cCceEEEEEEEE-------EccEECCccCCC----
Confidence            56799999999 4554   5889999999999999999999633 456666652111       00000  11111    


Q ss_pred             ccCCCCHHHHHHHHHHhCCCCCcEEEEeCChhcHHHHHHcCCeE
Q 027403          129 ILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHT  172 (224)
Q Consensus       129 ~~~KP~~~~~~~al~~~~~~~~~~l~VgDs~~Di~~A~~~G~~~  172 (224)
                         .-+.   ..+.+.++.+.+.+.+-|||.+|+.....+|-+.
T Consensus       162 ---~~K~---~~l~~~~~~~~~~~~aY~Ds~~D~pmL~~a~~~~  199 (211)
T PRK11590        162 ---HEKV---AQLERKIGTPLRLYSGYSDSKQDNPLLYFCQHRW  199 (211)
T ss_pred             ---hHHH---HHHHHHhCCCcceEEEecCCcccHHHHHhCCCCE
Confidence               1112   2333334667778899999999999998888763

>PRK14010 potassium-transporting ATPase subunit B; Provisional

Probab=96.50  E-value=0.02  Score=56.59  Aligned_cols=108  Identities=14%  Similarity=0.172  Sum_probs=76.5

Q ss_pred             CCChhHHHHHhcCC---CCeEEEeCCChHHHHHHHHHcCCccccceeEeeccCCCCCCCCCCCCCcccccCCccccccCC
Q 027403           56 KPDPVLRNLLLSMP---QRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCK  132 (224)
Q Consensus        56 ~~~~g~~~~L~~l~---~~~~I~Tn~~~~~~~~~l~~lgl~~~fd~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~K  132 (224)
                      ++.|++++.++.|+   .+++++|+-+..-+..+-+.+|+.++|..                                .+
T Consensus       441 p~R~~a~e~I~~Lr~~GI~vvMiTGDn~~TA~aIA~elGI~~v~A~--------------------------------~~  488 (673)
T PRK14010        441 VIKDGLVERFRELREMGIETVMCTGDNELTAATIAKEAGVDRFVAE--------------------------------CK  488 (673)
T ss_pred             CCcHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCceEEcC--------------------------------CC
Confidence            57789999999886   67889999999999999999999765432                                13


Q ss_pred             CCHHHHHHHHHHhCCCCCcEEEEeCChhcHHHHHHcCCeEEEECCCCC--CCCCceEe--CCHhHHHHHH
Q 027403          133 PSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP--VPPADHAL--NSIHNIKEAI  198 (224)
Q Consensus       133 P~~~~~~~al~~~~~~~~~~l~VgDs~~Di~~A~~~G~~~v~v~~~~~--~~~~d~~i--~~~~dl~~~i  198 (224)
                      |  +-=...++.++-.-+.|.|+||+.||.-+-+++.+- +.+++|..  ..-+|.++  +++..|.+.+
T Consensus       489 P--edK~~iV~~lQ~~G~~VaMtGDGvNDAPALa~ADVG-IAMgsGTdvAkeAADiVLldd~ls~Iv~av  555 (673)
T PRK14010        489 P--EDKINVIREEQAKGHIVAMTGDGTNDAPALAEANVG-LAMNSGTMSAKEAANLIDLDSNPTKLMEVV  555 (673)
T ss_pred             H--HHHHHHHHHHHhCCCEEEEECCChhhHHHHHhCCEE-EEeCCCCHHHHHhCCEEEcCCCHHHHHHHH
Confidence            3  222344444444446799999999999999888874 66665543  33456654  4566666655

>TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial

Probab=96.41  E-value=0.0085  Score=50.95  Aligned_cols=49  Identities=16%  Similarity=0.108  Sum_probs=43.0

Q ss_pred             CCCCHHHHHHHHHHhCCCCCcEEEEeCChhcHHHHHHcCCeEEEECCCCC
Q 027403          131 CKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP  180 (224)
Q Consensus       131 ~KP~~~~~~~al~~~~~~~~~~l~VgDs~~Di~~A~~~G~~~v~v~~~~~  180 (224)
                      ++++..+...++++++++++++++|||+.||+.....+|.. +.+.+..+
T Consensus       157 ~~~K~~al~~l~~~~g~~~~~~i~~GD~~nD~~ml~~~~~~-iav~na~~  205 (236)
T TIGR02471       157 RASKGLALRYLSYRWGLPLEQILVAGDSGNDEEMLRGLTLG-VVVGNHDP  205 (236)
T ss_pred             CCChHHHHHHHHHHhCCCHHHEEEEcCCccHHHHHcCCCcE-EEEcCCcH
Confidence            58999999999999999999999999999999999988864 56766543

Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472.

>COG2217 ZntA Cation transport ATPase [Inorganic ion transport and metabolism]

Probab=96.41  E-value=0.015  Score=57.78  Aligned_cols=108  Identities=19%  Similarity=0.341  Sum_probs=76.3

Q ss_pred             CCChhHHHHHhcCC---CCeEEEeCCChHHHHHHHHHcCCccccceeEeeccCCCCCCCCCCCCCcccccCCccccccCC
Q 027403           56 KPDPVLRNLLLSMP---QRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCK  132 (224)
Q Consensus        56 ~~~~g~~~~L~~l~---~~~~I~Tn~~~~~~~~~l~~lgl~~~fd~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~K  132 (224)
                      ++.|++++.+++|+   .+++++|+-++.-++.+-+.+|+++++..                                .+
T Consensus       537 ~~R~~a~~aI~~L~~~Gi~~~mLTGDn~~~A~~iA~~lGId~v~Ae--------------------------------ll  584 (713)
T COG2217         537 ELRPDAKEAIAALKALGIKVVMLTGDNRRTAEAIAKELGIDEVRAE--------------------------------LL  584 (713)
T ss_pred             CCChhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcChHhhecc--------------------------------CC
Confidence            46678888888886   67889999999999999999998766653                                14


Q ss_pred             CCHHHHHHHHHHhCCCCCcEEEEeCChhcHHHHHHcCCeEEEECCCCC--CCCCceEe--CCHhHHHHHH
Q 027403          133 PSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP--VPPADHAL--NSIHNIKEAI  198 (224)
Q Consensus       133 P~~~~~~~al~~~~~~~~~~l~VgDs~~Di~~A~~~G~~~v~v~~~~~--~~~~d~~i--~~~~dl~~~i  198 (224)
                      |....  ..+++++-.-..|.||||+.||--+-..+..- +.++.|..  ..-+|.++  +++..+.+.+
T Consensus       585 PedK~--~~V~~l~~~g~~VamVGDGINDAPALA~AdVG-iAmG~GtDvA~eaADvvL~~~dL~~v~~ai  651 (713)
T COG2217         585 PEDKA--EIVRELQAEGRKVAMVGDGINDAPALAAADVG-IAMGSGTDVAIEAADVVLMRDDLSAVPEAI  651 (713)
T ss_pred             cHHHH--HHHHHHHhcCCEEEEEeCCchhHHHHhhcCee-EeecCCcHHHHHhCCEEEecCCHHHHHHHH
Confidence            43322  34445544447899999999997776666553 55555543  44467754  4577777766

>TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB

Probab=96.38  E-value=0.005  Score=50.95  Aligned_cols=45  Identities=18%  Similarity=0.144  Sum_probs=40.8

Q ss_pred             cccCCCCHHHHHHHHHHhCCCCCcEEEEeCChhcHHHHHHcCCeE
Q 027403          128 RILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHT  172 (224)
Q Consensus       128 ~~~~KP~~~~~~~al~~~~~~~~~~l~VgDs~~Di~~A~~~G~~~  172 (224)
                      .+.+.+++...+.++++++++++++++|||+.+|+..++.+|+..
T Consensus       158 ~p~~~~K~~~~~~~~~~~~~~~~~~~~~GD~~nD~~~~~~~~~~v  202 (204)
T TIGR01484       158 LPAGVDKGSALQALLKELNGKRDEILAFGDSGNDEEMFEVAGLAV  202 (204)
T ss_pred             ecCCCChHHHHHHHHHHhCCCHHHEEEEcCCHHHHHHHHHcCCce
Confidence            344688999999999999999999999999999999999999864

The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear.

>PRK10976 putative hydrolase; Provisional

Probab=96.35  E-value=0.007  Score=52.20  Aligned_cols=70  Identities=16%  Similarity=0.172  Sum_probs=52.9

Q ss_pred             CCCCHHHHHHHHHHhCCCCCcEEEEeCChhcHHHHHHcCCeEEEECCCCC--CCCCc--eEeCCHhH--HHHHHHHH
Q 027403          131 CKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP--VPPAD--HALNSIHN--IKEAIPEI  201 (224)
Q Consensus       131 ~KP~~~~~~~al~~~~~~~~~~l~VgDs~~Di~~A~~~G~~~v~v~~~~~--~~~~d--~~i~~~~d--l~~~i~~~  201 (224)
                      +-.+....+.+++.+|+++++++.|||+.||+..-..+|. .+.+.++.+  ...++  ++..+-.+  +...|.++
T Consensus       188 gvsKg~al~~l~~~lgi~~~~viafGD~~NDi~Ml~~ag~-~vAm~NA~~~vK~~A~~~~v~~~n~edGVa~~l~~~  263 (266)
T PRK10976        188 GVSKGHALEAVAKKLGYSLKDCIAFGDGMNDAEMLSMAGK-GCIMGNAHQRLKDLLPELEVIGSNADDAVPHYLRKL  263 (266)
T ss_pred             CCChHHHHHHHHHHcCCCHHHeEEEcCCcccHHHHHHcCC-CeeecCCcHHHHHhCCCCeecccCchHHHHHHHHHH
Confidence            3567889999999999999999999999999999999998 477777754  33344  55544322  55555443

>PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A

Probab=96.12  E-value=0.007  Score=45.40  Aligned_cols=52  Identities=19%  Similarity=0.178  Sum_probs=37.9

Q ss_pred             CCCCChhHHHHHhcCC---CCeEEEeCCCh---HHHHHHHHHcCCccccceeEeeccC
Q 027403           54 KLKPDPVLRNLLLSMP---QRKIIFTNADQ---KHAMEVLGRLGLEDCFEGIICFETI  105 (224)
Q Consensus        54 ~~~~~~g~~~~L~~l~---~~~~I~Tn~~~---~~~~~~l~~lgl~~~fd~ii~~~~~  105 (224)
                      .-.++||+.++|+.|+   .+++++||++.   ......|+.+|+.---+.|+++...
T Consensus        12 g~~~ipga~e~l~~L~~~g~~~~~lTNns~~s~~~~~~~L~~~Gi~~~~~~i~ts~~~   69 (101)
T PF13344_consen   12 GNEPIPGAVEALDALRERGKPVVFLTNNSSRSREEYAKKLKKLGIPVDEDEIITSGMA   69 (101)
T ss_dssp             TTEE-TTHHHHHHHHHHTTSEEEEEES-SSS-HHHHHHHHHHTTTT--GGGEEEHHHH
T ss_pred             CCCcCcCHHHHHHHHHHcCCCEEEEeCCCCCCHHHHHHHHHhcCcCCCcCEEEChHHH
Confidence            4578999999999996   67889999863   5677778999987555677776653

...

>PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional

Probab=96.07  E-value=0.008  Score=52.16  Aligned_cols=71  Identities=11%  Similarity=0.184  Sum_probs=55.7

Q ss_pred             CCCHHHHHHHHHHhCCCCCcEEEEeCChhcHHHHHHcCCeEEEECCCCC--CCCCce--EeCCH--hHHHHHHHHHHh
Q 027403          132 KPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP--VPPADH--ALNSI--HNIKEAIPEIWE  203 (224)
Q Consensus       132 KP~~~~~~~al~~~~~~~~~~l~VgDs~~Di~~A~~~G~~~v~v~~~~~--~~~~d~--~i~~~--~dl~~~i~~~~~  203 (224)
                      -.+....+.+++.+|+++++++.|||+.||+..-+.+|. .+.+.++.+  ...+++  ++.+-  .-+..+|..++.
T Consensus       187 ~sKg~al~~l~~~~gi~~~~v~afGD~~NDi~Ml~~ag~-~vAm~Na~~~vK~~A~~~~v~~~n~edGva~~l~~~~~  263 (272)
T PRK15126        187 CNKGAALAVLSQHLGLSLADCMAFGDAMNDREMLGSVGR-GFIMGNAMPQLRAELPHLPVIGHCRNQAVSHYLTHWLD  263 (272)
T ss_pred             CChHHHHHHHHHHhCCCHHHeEEecCCHHHHHHHHHcCC-ceeccCChHHHHHhCCCCeecCCCcchHHHHHHHHHhc
Confidence            568899999999999999999999999999999999998 577777654  333554  44432  347777777764

>PRK01122 potassium-transporting ATPase subunit B; Provisional

Probab=95.96  E-value=0.05  Score=53.94  Aligned_cols=108  Identities=12%  Similarity=0.210  Sum_probs=75.6

Q ss_pred             CCChhHHHHHhcCC---CCeEEEeCCChHHHHHHHHHcCCccccceeEeeccCCCCCCCCCCCCCcccccCCccccccCC
Q 027403           56 KPDPVLRNLLLSMP---QRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCK  132 (224)
Q Consensus        56 ~~~~g~~~~L~~l~---~~~~I~Tn~~~~~~~~~l~~lgl~~~fd~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~K  132 (224)
                      ++.||+++.++.|+   .+++++|+-...-+...-+.+|+.++|..                                ..
T Consensus       445 ~~R~~~~eai~~Lr~~GI~vvMiTGDn~~TA~aIA~elGId~v~A~--------------------------------~~  492 (679)
T PRK01122        445 IVKPGIKERFAELRKMGIKTVMITGDNPLTAAAIAAEAGVDDFLAE--------------------------------AT  492 (679)
T ss_pred             cCchhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCcEEEcc--------------------------------CC
Confidence            46789999998886   68889999999999999999998654321                                13


Q ss_pred             CCHHHHHHHHHHhCCCCCcEEEEeCChhcHHHHHHcCCeEEEECCCCC--CCCCceEe--CCHhHHHHHH
Q 027403          133 PSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP--VPPADHAL--NSIHNIKEAI  198 (224)
Q Consensus       133 P~~~~~~~al~~~~~~~~~~l~VgDs~~Di~~A~~~G~~~v~v~~~~~--~~~~d~~i--~~~~dl~~~i  198 (224)
                      |.  -=...+++++-.-+-|.|+||+.||.-+-+++..- +.++.|..  ..-+|.++  +|+..|.+.+
T Consensus       493 Pe--dK~~iV~~lQ~~G~~VaMtGDGvNDAPALa~ADVG-IAMgsGTdvAkeAADiVLldd~~s~Iv~av  559 (679)
T PRK01122        493 PE--DKLALIRQEQAEGRLVAMTGDGTNDAPALAQADVG-VAMNSGTQAAKEAGNMVDLDSNPTKLIEVV  559 (679)
T ss_pred             HH--HHHHHHHHHHHcCCeEEEECCCcchHHHHHhCCEe-EEeCCCCHHHHHhCCEEEeCCCHHHHHHHH
Confidence            32  22233444443346699999999999998888774 56666544  34466664  3466666655

>TIGR01545 YfhB_g-proteo haloacid dehalogenase superfamily, subfamily IF hydrolase, YfhB

Probab=95.92  E-value=0.078  Score=44.82  Aligned_cols=99  Identities=10%  Similarity=-0.033  Sum_probs=64.5

Q ss_pred             CCCChhHHHHHh-cCC---CCeEEEeCCChHHHHHHHHHcCCccccceeEeeccCCCCCCCCCCCCCcc---cccCCccc
Q 027403           55 LKPDPVLRNLLL-SMP---QRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIE---NNSFSSNQ  127 (224)
Q Consensus        55 ~~~~~g~~~~L~-~l~---~~~~I~Tn~~~~~~~~~l~~lgl~~~fd~ii~~~~~~~~~~~~~~~~~~~---~~~~~~~~  127 (224)
                      ..++|++.+.|+ .++   .+++|+||++...+..+.+..++.+ .+.+++++-...        +|+.   .+|.+   
T Consensus        93 ~~l~pga~e~L~~~l~~~G~~v~IvSas~~~~~~~ia~~~~~~~-~~~~i~t~le~~--------~gg~~~g~~c~g---  160 (210)
T TIGR01545        93 VTAFPLVAERLRQYLESSDADIWLITGSPQPLVEAVYFDSNFIH-RLNLIASQIERG--------NGGWVLPLRCLG---  160 (210)
T ss_pred             CCCCccHHHHHHHHHHhCCCEEEEEcCCcHHHHHHHHHhccccc-cCcEEEEEeEEe--------CCceEcCccCCC---
Confidence            467999999995 554   6899999999999999998877543 245665541110        1111   11222   


Q ss_pred             cccCCCCHHHHHHHHHHhCCCCCcEEEEeCChhcHHHHHHcCCeE
Q 027403          128 RILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHT  172 (224)
Q Consensus       128 ~~~~KP~~~~~~~al~~~~~~~~~~l~VgDs~~Di~~A~~~G~~~  172 (224)
                          .-+..   .+.+.++.+.+.+.+-|||.+|+..-..+|-+.
T Consensus       161 ----~~Kv~---rl~~~~~~~~~~~~aYsDS~~D~pmL~~a~~~~  198 (210)
T TIGR01545       161 ----HEKVA---QLEQKIGSPLKLYSGYSDSKQDNPLLAFCEHRW  198 (210)
T ss_pred             ----hHHHH---HHHHHhCCChhheEEecCCcccHHHHHhCCCcE
Confidence                11222   233334556677899999999999988888763

The gene name comes from the E. coli gene. There is currently no information regarding the function of this gene.

>PF03031 NIF: NLI interacting factor-like phosphatase; InterPro: IPR004274 The function of this domain is unclear

Probab=95.92  E-value=0.0023  Score=51.09  Aligned_cols=81  Identities=21%  Similarity=0.228  Sum_probs=57.2

Q ss_pred             CCCChhHHHHHhcCC--CCeEEEeCCChHHHHHHHHHcCC-ccccceeEeeccCCCCCCCCCCCCCcccccCCccccccC
Q 027403           55 LKPDPVLRNLLLSMP--QRKIIFTNADQKHAMEVLGRLGL-EDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILC  131 (224)
Q Consensus        55 ~~~~~g~~~~L~~l~--~~~~I~Tn~~~~~~~~~l~~lgl-~~~fd~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  131 (224)
                      +...||+.++|+.+.  +.++|.|.+.+.++..+++.+.. ..+|+.+++.++....                      .
T Consensus        35 v~~RP~l~~FL~~l~~~~ev~i~T~~~~~ya~~v~~~ldp~~~~~~~~~~r~~~~~~----------------------~   92 (159)
T PF03031_consen   35 VKLRPGLDEFLEELSKHYEVVIWTSASEEYAEPVLDALDPNGKLFSRRLYRDDCTFD----------------------K   92 (159)
T ss_dssp             EEE-TTHHHHHHHHHHHCEEEEE-SS-HHHHHHHHHHHTTTTSSEEEEEEGGGSEEE----------------------T
T ss_pred             EeeCchHHHHHHHHHHhceEEEEEeehhhhhhHHHHhhhhhcccccccccccccccc----------------------c
Confidence            456799999999997  89999999999999999999987 5689988877654321                      0


Q ss_pred             CCCHHHHHHHHHHhCCCCCcEEEEeCChhc
Q 027403          132 KPSLEAIETAIRIANVDPKKTIFFDDSARN  161 (224)
Q Consensus       132 KP~~~~~~~al~~~~~~~~~~l~VgDs~~D  161 (224)
                      +..    ..-++.++.+.+++++|+|++.-
T Consensus        93 ~~~----~KdL~~l~~~~~~vvivDD~~~~  118 (159)
T PF03031_consen   93 GSY----IKDLSKLGRDLDNVVIVDDSPRK  118 (159)
T ss_dssp             TEE----E--GGGSSS-GGGEEEEES-GGG
T ss_pred             ccc----ccchHHHhhccccEEEEeCCHHH
Confidence            101    13445557678999999999874

It is found in proteins of diverse function including phosphatases some of which may be active in active in ternary elongation complexes and a number of NLI interacting factors. In the phospatases this domain is often present N-terminal to the BRCT domain (IPR001357 from INTERPRO).; GO: 0005515 protein binding; PDB: 3L0Y_A 2GHQ_A 3PGL_A 3L0C_B 1TA0_A 2GHT_A 3L0B_B 1T9Z_A 3QLE_A 2Q5E_E ....

>TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily

Probab=95.91  E-value=0.0094  Score=51.18  Aligned_cols=59  Identities=22%  Similarity=0.244  Sum_probs=46.9

Q ss_pred             CCCCHHHHHHHHHHhCCCCCcEEEEeCChhcHHHHHHcCCeEEEECCCCC--CCCCceEeCC
Q 027403          131 CKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP--VPPADHALNS  190 (224)
Q Consensus       131 ~KP~~~~~~~al~~~~~~~~~~l~VgDs~~Di~~A~~~G~~~v~v~~~~~--~~~~d~~i~~  190 (224)
                      +-.+....+.+++.++++++++++|||+.||+..+..+|+. +.+.++.+  ...++++..+
T Consensus       186 ~~~K~~~i~~~~~~~~~~~~~~~~~GD~~nD~~m~~~~~~~-~a~~na~~~~k~~a~~~~~~  246 (256)
T TIGR00099       186 GVSKGSALQSLAEALGISLEDVIAFGDGMNDIEMLEAAGYG-VAMGNADEELKALADYVTDS  246 (256)
T ss_pred             CCChHHHHHHHHHHcCCCHHHEEEeCCcHHhHHHHHhCCce-eEecCchHHHHHhCCEEecC
Confidence            36688999999999999999999999999999999999986 44444432  3346666554

The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences.

>TIGR01647 ATPase-IIIA_H plasma-membrane proton-efflux P-type ATPase

Probab=95.80  E-value=0.029  Score=56.18  Aligned_cols=139  Identities=17%  Similarity=0.104  Sum_probs=80.0

Q ss_pred             CCChhHHHHHhcCC---CCeEEEeCCChHHHHHHHHHcCCccccceeEeeccCCCCCCCCCCCCCcccccCCccccccCC
Q 027403           56 KPDPVLRNLLLSMP---QRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCK  132 (224)
Q Consensus        56 ~~~~g~~~~L~~l~---~~~~I~Tn~~~~~~~~~l~~lgl~~~fd~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~K  132 (224)
                      ++.|+++++++.|+   .+++++|+-...-+..+-+.+|+.+.   ++++++.....+ ....+..+-.....+...-+.
T Consensus       442 p~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~~IA~~lGI~~~---~~~~~~l~~~~~-~~~~~~~~~~~~~~~~~vfAr  517 (755)
T TIGR01647       442 PPRHDTKETIERARHLGVEVKMVTGDHLAIAKETARRLGLGTN---IYTADVLLKGDN-RDDLPSGELGEMVEDADGFAE  517 (755)
T ss_pred             CChhhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCC---CcCHHHhcCCcc-hhhCCHHHHHHHHHhCCEEEe
Confidence            57789999998887   68889999999999999999998541   233222211000 000000000000000000011


Q ss_pred             CCHHHHHHHHHHhCCCCCcEEEEeCChhcHHHHHHcCCeEEEECCCCC--CCCCceEe--CCHhHHHHHHH
Q 027403          133 PSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP--VPPADHAL--NSIHNIKEAIP  199 (224)
Q Consensus       133 P~~~~~~~al~~~~~~~~~~l~VgDs~~Di~~A~~~G~~~v~v~~~~~--~~~~d~~i--~~~~dl~~~i~  199 (224)
                      -.|+-=..+.+.++-.-..|.|+||+.||.-+-+++.+- +.+..+..  ..-+|.++  +++..+...+.
T Consensus       518 ~~Pe~K~~iV~~lq~~G~~VamvGDGvNDapAL~~AdVG-IAm~~gtdvAkeaADivLl~d~l~~I~~ai~  587 (755)
T TIGR01647       518 VFPEHKYEIVEILQKRGHLVGMTGDGVNDAPALKKADVG-IAVAGATDAARSAADIVLTEPGLSVIVDAIL  587 (755)
T ss_pred             cCHHHHHHHHHHHHhcCCEEEEEcCCcccHHHHHhCCee-EEecCCcHHHHHhCCEEEEcCChHHHHHHHH
Confidence            222222334444444446799999999999999988875 55665543  44477765  45777766663

This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast.

>PRK10517 magnesium-transporting ATPase MgtA; Provisional

Probab=95.75  E-value=0.027  Score=57.53  Aligned_cols=134  Identities=16%  Similarity=0.205  Sum_probs=82.1

Q ss_pred             CCChhHHHHHhcCC---CCeEEEeCCChHHHHHHHHHcCCccccceeEeeccCCCCCCCCCCCCCcccccCCccccccCC
Q 027403           56 KPDPVLRNLLLSMP---QRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCK  132 (224)
Q Consensus        56 ~~~~g~~~~L~~l~---~~~~I~Tn~~~~~~~~~l~~lgl~~~fd~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~K  132 (224)
                      +|.|++++.++.|+   .+++++|+-...-+..+-+.+|+.+  +.++++.+....       +.-+-.....+...-+.
T Consensus       550 p~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~~IA~~lGI~~--~~v~~G~el~~l-------~~~el~~~~~~~~VfAr  620 (902)
T PRK10517        550 PPKETTAPALKALKASGVTVKILTGDSELVAAKVCHEVGLDA--GEVLIGSDIETL-------SDDELANLAERTTLFAR  620 (902)
T ss_pred             cchhhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCc--cCceeHHHHHhC-------CHHHHHHHHhhCcEEEE
Confidence            56788999988886   6788999999999999999999852  345554433210       00000000000000012


Q ss_pred             CCHHHHHHHHHHhCCCCCcEEEEeCChhcHHHHHHcCCeEEEECCCCC--CCCCceEe--CCHhHHHHHHH
Q 027403          133 PSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP--VPPADHAL--NSIHNIKEAIP  199 (224)
Q Consensus       133 P~~~~~~~al~~~~~~~~~~l~VgDs~~Di~~A~~~G~~~v~v~~~~~--~~~~d~~i--~~~~dl~~~i~  199 (224)
                      -.|+-=..+.+.++-.-.-|.|+||+.||.-+-+++.+- |.++.+..  ..-+|.++  +|+..+.+.+.
T Consensus       621 ~sPe~K~~IV~~Lq~~G~vVam~GDGvNDaPALk~ADVG-IAmg~gtdvAkeaADiVLldd~~~~I~~ai~  690 (902)
T PRK10517        621 LTPMHKERIVTLLKREGHVVGFMGDGINDAPALRAADIG-ISVDGAVDIAREAADIILLEKSLMVLEEGVI  690 (902)
T ss_pred             cCHHHHHHHHHHHHHCCCEEEEECCCcchHHHHHhCCEE-EEeCCcCHHHHHhCCEEEecCChHHHHHHHH
Confidence            233333334444443346799999999999999998874 56665543  44578876  56777776664

>PRK15122 magnesium-transporting ATPase; Provisional

Probab=95.70  E-value=0.029  Score=57.30  Aligned_cols=134  Identities=13%  Similarity=0.160  Sum_probs=82.6

Q ss_pred             CCChhHHHHHhcCC---CCeEEEeCCChHHHHHHHHHcCCccccceeEeeccCCCCCCCCCCCCCcccccCCccccccCC
Q 027403           56 KPDPVLRNLLLSMP---QRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCK  132 (224)
Q Consensus        56 ~~~~g~~~~L~~l~---~~~~I~Tn~~~~~~~~~l~~lgl~~~fd~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~K  132 (224)
                      ++.|+++++++.|+   .+++++|+-...-+..+-+.+|+.+  +.++++.+....       +.-+-.....+...-+.
T Consensus       550 p~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~aIA~~lGI~~--~~vi~G~el~~~-------~~~el~~~v~~~~VfAr  620 (903)
T PRK15122        550 PPKESAAPAIAALRENGVAVKVLTGDNPIVTAKICREVGLEP--GEPLLGTEIEAM-------DDAALAREVEERTVFAK  620 (903)
T ss_pred             ccHHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCC--CCccchHhhhhC-------CHHHHHHHhhhCCEEEE
Confidence            57789999999987   6888999999999999999999852  234444333210       00000000000000012


Q ss_pred             CCHHHHHHHHHHhCCCCCcEEEEeCChhcHHHHHHcCCeEEEECCCCC--CCCCceEe--CCHhHHHHHHH
Q 027403          133 PSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP--VPPADHAL--NSIHNIKEAIP  199 (224)
Q Consensus       133 P~~~~~~~al~~~~~~~~~~l~VgDs~~Di~~A~~~G~~~v~v~~~~~--~~~~d~~i--~~~~dl~~~i~  199 (224)
                      -.|+-=..+.+.++-.-.-|.|+||+.||.-+-+++.+- |.++.|..  ..-+|.++  ++|..+.+.+.
T Consensus       621 ~sPe~K~~iV~~Lq~~G~vVamtGDGvNDaPALk~ADVG-IAmg~gtdvAkeaADiVLldd~f~~Iv~ai~  690 (903)
T PRK15122        621 LTPLQKSRVLKALQANGHTVGFLGDGINDAPALRDADVG-ISVDSGADIAKESADIILLEKSLMVLEEGVI  690 (903)
T ss_pred             eCHHHHHHHHHHHHhCCCEEEEECCCchhHHHHHhCCEE-EEeCcccHHHHHhcCEEEecCChHHHHHHHH
Confidence            233333334444443446799999999999999998875 66665544  45578876  56877777664

>COG5610 Predicted hydrolase (HAD superfamily) [General function prediction only]

Probab=95.70  E-value=0.026  Score=53.18  Aligned_cols=116  Identities=21%  Similarity=0.192  Sum_probs=85.8

Q ss_pred             CCHHHHHHHHhccCCCCC--CCCChhHHHHHhcCC---CCeEEEeCC--ChHHHHHHHHHcCCccccceeEeeccCCCCC
Q 027403           37 FDNDEFHAFVHGKLPYEK--LKPDPVLRNLLLSMP---QRKIIFTNA--DQKHAMEVLGRLGLEDCFEGIICFETINPRL  109 (224)
Q Consensus        37 ~~~~~~~~~~~~~~~~~~--~~~~~g~~~~L~~l~---~~~~I~Tn~--~~~~~~~~l~~lgl~~~fd~ii~~~~~~~~~  109 (224)
                      ..+..|.+.+.-.+..+.  +-|.....++.+.+.   .+++++|.-  |.+-++..|...|.+..--.+..|.+...  
T Consensus        78 ~~p~~f~~~~~lEI~tEKevLypn~~~~eL~e~ai~n~krVIlISDMYlps~Il~~~L~s~g~d~~nipiY~S~e~rl--  155 (635)
T COG5610          78 NFPLSFQELMKLEINTEKEVLYPNKKNIELVEEAIKNEKRVILISDMYLPSSILRTFLNSFGPDFNNIPIYMSSEFRL--  155 (635)
T ss_pred             hCcHHHHHHhceeeccceeEeeccccchHHHHHHHhCCCeEEEEecccCcHHHHHHHHHhcCCCccCceeeecceeeh--
Confidence            344556655544444443  334444455666663   788899984  67888999999997644445666665544  


Q ss_pred             CCCCCCCCcccccCCccccccCCCCHHHHHHHHHHhCCCCCcEEEEeCChh-cHHHHHHcCCeEEEE
Q 027403          110 QPADNTDGIENNSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSAR-NIASAKAAGLHTVIV  175 (224)
Q Consensus       110 ~~~~~~~~~~~~~~~~~~~~~~KP~~~~~~~al~~~~~~~~~~l~VgDs~~-Di~~A~~~G~~~v~v  175 (224)
                                           .|.+...|..+++.-+++|.+.++|||..+ |+..+++.|+.|.+.
T Consensus       156 ---------------------~KnSg~LFk~Vlk~EnVd~~~w~H~GDN~~aD~l~pk~LgI~Tlf~  201 (635)
T COG5610         156 ---------------------KKNSGNLFKAVLKLENVDPKKWIHCGDNWVADYLKPKNLGISTLFY  201 (635)
T ss_pred             ---------------------hcccchHHHHHHhhcCCChhheEEecCchhhhhcCccccchhHHHH
Confidence                                 399999999999999999999999999985 999999999998776

>TIGR01524 ATPase-IIIB_Mg magnesium-translocating P-type ATPase

Probab=95.67  E-value=0.067  Score=54.45  Aligned_cols=134  Identities=11%  Similarity=0.151  Sum_probs=80.3

Q ss_pred             CCChhHHHHHhcCC---CCeEEEeCCChHHHHHHHHHcCCccccceeEeeccCCCCCCCCCCCCCcccccCCccccccCC
Q 027403           56 KPDPVLRNLLLSMP---QRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCK  132 (224)
Q Consensus        56 ~~~~g~~~~L~~l~---~~~~I~Tn~~~~~~~~~l~~lgl~~~fd~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~K  132 (224)
                      ++.|++++.++.|+   .+++++|+-...-+..+-+.+|+..  +.++++.+....       +.-+-.....+...-+.
T Consensus       515 p~R~~~~~aI~~l~~aGI~vvmiTGD~~~tA~aIA~~lGI~~--~~v~~g~~l~~~-------~~~el~~~~~~~~vfAr  585 (867)
T TIGR01524       515 PPKESTKEAIAALFKNGINVKVLTGDNEIVTARICQEVGIDA--NDFLLGADIEEL-------SDEELARELRKYHIFAR  585 (867)
T ss_pred             CCchhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCC--CCeeecHhhhhC-------CHHHHHHHhhhCeEEEE
Confidence            56789999999887   6788999999999999999999852  234444332210       00000000000000011


Q ss_pred             CCHHHHHHHHHHhCCCCCcEEEEeCChhcHHHHHHcCCeEEEECCCCC--CCCCceEe--CCHhHHHHHHH
Q 027403          133 PSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP--VPPADHAL--NSIHNIKEAIP  199 (224)
Q Consensus       133 P~~~~~~~al~~~~~~~~~~l~VgDs~~Di~~A~~~G~~~v~v~~~~~--~~~~d~~i--~~~~dl~~~i~  199 (224)
                      -.|+-=..+.+.++-.-..|.|+||+.||.-+-+.+.+- +.++.|..  ..-+|.++  +++..+...+.
T Consensus       586 ~~Pe~K~~iV~~lq~~G~vVam~GDGvNDapALk~AdVG-IAmg~gtdvAk~aADiVLldd~~~~I~~ai~  655 (867)
T TIGR01524       586 LTPMQKSRIIGLLKKAGHTVGFLGDGINDAPALRKADVG-ISVDTAADIAKEASDIILLEKSLMVLEEGVI  655 (867)
T ss_pred             CCHHHHHHHHHHHHhCCCEEEEECCCcccHHHHHhCCEE-EEeCCccHHHHHhCCEEEecCChHHHHHHHH
Confidence            122222233333333336799999999999999999885 55665544  44478876  55777766664

The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis.

>KOG2470 consensus Similar to IMP-GMP specific 5'-nucleotidase [Nucleotide transport and metabolism]

Probab=95.66  E-value=0.018  Score=52.55  Aligned_cols=121  Identities=13%  Similarity=0.168  Sum_probs=71.5

Q ss_pred             CCCChhHHHHHhcCC---CCeEEEeCCChHHHHHHHHHc-C--CccccceeEeeccCCCCCC-C-CCCCCCcccccCCcc
Q 027403           55 LKPDPVLRNLLLSMP---QRKIIFTNADQKHAMEVLGRL-G--LEDCFEGIICFETINPRLQ-P-ADNTDGIENNSFSSN  126 (224)
Q Consensus        55 ~~~~~g~~~~L~~l~---~~~~I~Tn~~~~~~~~~l~~l-g--l~~~fd~ii~~~~~~~~~~-~-~~~~~~~~~~~~~~~  126 (224)
                      +.-.|....+|.+|+   +++.++||+|.+.++.-...+ |  ..++||.||.--+-+..-- . |-.-+  +|+++.+.
T Consensus       239 i~r~~ql~~fl~kL~~~GKklFLiTNSPysFVd~GM~flvG~~WRdlFDVVIvqA~KP~Fftde~rPfR~--~dek~~sl  316 (510)
T KOG2470|consen  239 IERNPQLLAFLRKLKDHGKKLFLITNSPYSFVDKGMRFLVGDDWRDLFDVVIVQANKPEFFTDERRPFRK--YDEKRGSL  316 (510)
T ss_pred             hhccHHHHHHHHHHHHhcCcEEEEeCCchhhhhcCceeeeCccHHhhhheeEEecCCCcccccccCcchh--hcccccch
Confidence            445567778888886   789999999999877655433 2  3578998775433221100 0 00000  12222221


Q ss_pred             cc---ccCCCC----HHHHHHHHHHhCCCCCcEEEEeCCh-hcHHHHH-HcCCeEEEECC
Q 027403          127 QR---ILCKPS----LEAIETAIRIANVDPKKTIFFDDSA-RNIASAK-AAGLHTVIVGS  177 (224)
Q Consensus       127 ~~---~~~KP~----~~~~~~al~~~~~~~~~~l~VgDs~-~Di~~A~-~~G~~~v~v~~  177 (224)
                      .-   .+-.|.    ..-....++-.++.-.+|+++||++ +|+..-- ++||++-.|-.
T Consensus       317 ~wdkv~klekgkiYy~G~l~~flelt~WrG~~VlYFGDHlySDLad~tlkhgWRTgAII~  376 (510)
T KOG2470|consen  317 LWDKVDKLEKGKIYYQGNLKSFLELTGWRGPRVLYFGDHLYSDLADLTLKHGWRTGAIIP  376 (510)
T ss_pred             hhhhhhhcccCceeeeccHHHHHHHhccCCCeeEEecCcchhhhhhhHhhcccccccchH
Confidence            10   000111    1122345666688889999999997 6988776 99999877743

>TIGR01675 plant-AP plant acid phosphatase

Probab=95.52  E-value=0.12  Score=44.71  Aligned_cols=100  Identities=10%  Similarity=0.051  Sum_probs=61.9

Q ss_pred             CCCCCChhHHHHHhcCC---CCeEEEeCCChHH---HHHHHHHcCCccccceeEeeccCCCCCCCCCCCCCcccccCCcc
Q 027403           53 EKLKPDPVLRNLLLSMP---QRKIIFTNADQKH---AMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSN  126 (224)
Q Consensus        53 ~~~~~~~g~~~~L~~l~---~~~~I~Tn~~~~~---~~~~l~~lgl~~~fd~ii~~~~~~~~~~~~~~~~~~~~~~~~~~  126 (224)
                      ...++.|++.++++.++   .+++++||++...   +...|...|+..+ +.++.-.....                   
T Consensus       117 ~~apaip~al~l~~~l~~~G~~Vf~lTGR~e~~r~~T~~nL~~~G~~~~-~~LiLR~~~d~-------------------  176 (229)
T TIGR01675       117 GAAPALPEGLKLYQKIIELGIKIFLLSGRWEELRNATLDNLINAGFTGW-KHLILRGLEDS-------------------  176 (229)
T ss_pred             CCCCCCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHHcCCCCc-CeeeecCCCCC-------------------
Confidence            44678999999999986   6788999999655   7788888897654 66554321111                   


Q ss_pred             ccccCCCCHHHHHHHHH-HhCC-CCCcEEEEeCChhcHHHHHHcCCeEEEECCC
Q 027403          127 QRILCKPSLEAIETAIR-IANV-DPKKTIFFDDSARNIASAKAAGLHTVIVGSS  178 (224)
Q Consensus       127 ~~~~~KP~~~~~~~al~-~~~~-~~~~~l~VgDs~~Di~~A~~~G~~~v~v~~~  178 (224)
                          .| +.-.|....+ ++-- .-.=+..|||..+|+.+. -+|.++.-.++|
T Consensus       177 ----~~-~~~~yKs~~R~~l~~~GYrIv~~iGDq~sDl~G~-~~~~RtFKLPNP  224 (229)
T TIGR01675       177 ----NK-TVVTYKSEVRKSLMEEGYRIWGNIGDQWSDLLGS-PPGRRTFKLPNP  224 (229)
T ss_pred             ----Cc-hHhHHHHHHHHHHHhCCceEEEEECCChHHhcCC-CccCceeeCCCC
Confidence                02 2222332222 1110 123368899999999775 445565555443

This model explicitly excludes the VSPs which lack the nucleophilc aspartate. The possibility exists, however, that some members of this family may, while containing all of the conserved HAD-superfamily catalytic residues, lack activity and have a function related to the function of the VSPs rather than the acid phosphatases.

>TIGR01517 ATPase-IIB_Ca plasma-membrane calcium-translocating P-type ATPase

Probab=95.38  E-value=0.08  Score=54.32  Aligned_cols=136  Identities=12%  Similarity=0.051  Sum_probs=80.1

Q ss_pred             CCChhHHHHHhcCC---CCeEEEeCCChHHHHHHHHHcCCccccceeEeeccCCCCCCCCCCCCCcccccCCccccccCC
Q 027403           56 KPDPVLRNLLLSMP---QRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCK  132 (224)
Q Consensus        56 ~~~~g~~~~L~~l~---~~~~I~Tn~~~~~~~~~l~~lgl~~~fd~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~K  132 (224)
                      ++.|+++++++.|+   .+++++|+-...-+..+-+.+|+.+-=..++++.+.....+.. ....+..  .....|  ..
T Consensus       579 plr~~~~~aI~~l~~aGI~v~miTGD~~~tA~~iA~~~GI~~~~~~vi~G~~~~~l~~~e-l~~~i~~--~~Vfar--~s  653 (941)
T TIGR01517       579 PLRPGVREAVQECQRAGITVRMVTGDNIDTAKAIARNCGILTFGGLAMEGKEFRRLVYEE-MDPILPK--LRVLAR--SS  653 (941)
T ss_pred             CCchhHHHHHHHHHHCCCEEEEECCCChHHHHHHHHHcCCCCCCceEeeHHHhhhCCHHH-HHHHhcc--CeEEEE--CC
Confidence            56788999998886   6788999999999999999999853222344443322100000 0000000  000011  12


Q ss_pred             CCHHHHHHHHHHhCCCCCcEEEEeCChhcHHHHHHcCCeEEEEC-CCCC--CCCCceEeC--CHhHHHHHHH
Q 027403          133 PSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVG-SSVP--VPPADHALN--SIHNIKEAIP  199 (224)
Q Consensus       133 P~~~~~~~al~~~~~~~~~~l~VgDs~~Di~~A~~~G~~~v~v~-~~~~--~~~~d~~i~--~~~dl~~~i~  199 (224)
                      |.  -=..+.+.++-.-..|.|+||+.||.-+-+++.+- |.++ .|..  ..-+|+++.  +|..+..++.
T Consensus       654 Pe--~K~~iV~~lq~~g~vVam~GDGvNDapALk~AdVG-IAmg~~gtdvAk~aADivL~dd~f~~I~~~i~  722 (941)
T TIGR01517       654 PL--DKQLLVLMLKDMGEVVAVTGDGTNDAPALKLADVG-FSMGISGTEVAKEASDIILLDDNFASIVRAVK  722 (941)
T ss_pred             HH--HHHHHHHHHHHCCCEEEEECCCCchHHHHHhCCcc-eecCCCccHHHHHhCCEEEecCCHHHHHHHHH
Confidence            22  22223333332335799999999999999888764 4444 4433  445788876  7888877773

The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1), which are modelled by the corresponding TIGR01116 and TIGR01522. This model is well separated from the two others.

>PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification []

Probab=95.31  E-value=0.024  Score=47.15  Aligned_cols=61  Identities=26%  Similarity=0.354  Sum_probs=49.5

Q ss_pred             CCCHHHHHHHHHHhCCCCCcEEEEeCChhcHHHHHHcCCeEEEECCCCC--CCCCceEeCCHhH
Q 027403          132 KPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP--VPPADHALNSIHN  193 (224)
Q Consensus       132 KP~~~~~~~al~~~~~~~~~~l~VgDs~~Di~~A~~~G~~~v~v~~~~~--~~~~d~~i~~~~d  193 (224)
                      =.+..+...+++.+|+++++++.|||+.||+.....+|.. +.+.+..+  ...++++..+-.+
T Consensus       185 vsK~~ai~~l~~~~~i~~~~~~~~GD~~ND~~Ml~~~~~~-~am~na~~~~k~~a~~i~~~~~~  247 (254)
T PF08282_consen  185 VSKGSAIKYLLEYLGISPEDIIAFGDSENDIEMLELAGYS-VAMGNATPELKKAADYITPSNND  247 (254)
T ss_dssp             SSHHHHHHHHHHHHTTSGGGEEEEESSGGGHHHHHHSSEE-EEETTS-HHHHHHSSEEESSGTC
T ss_pred             CCHHHHHHHHhhhcccccceeEEeecccccHhHHhhcCeE-EEEcCCCHHHHHhCCEEecCCCC
Confidence            4577888999999999999999999999999999999885 77776654  4447777766655

This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A ....

>PLN02887 hydrolase family protein

Probab=95.24  E-value=0.037  Score=53.88  Aligned_cols=57  Identities=18%  Similarity=0.186  Sum_probs=46.7

Q ss_pred             CCHHHHHHHHHHhCCCCCcEEEEeCChhcHHHHHHcCCeEEEECCCCC--CCCCceEeCC
Q 027403          133 PSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP--VPPADHALNS  190 (224)
Q Consensus       133 P~~~~~~~al~~~~~~~~~~l~VgDs~~Di~~A~~~G~~~v~v~~~~~--~~~~d~~i~~  190 (224)
                      .+......+++.+|+++++|+.|||+.||+..-..+|. .|.+.++.+  ...++++..+
T Consensus       507 SKG~ALk~L~e~lGI~~eeviAFGDs~NDIeMLe~AG~-gVAMgNA~eeVK~~Ad~VT~s  565 (580)
T PLN02887        507 SKGNGVKMLLNHLGVSPDEIMAIGDGENDIEMLQLASL-GVALSNGAEKTKAVADVIGVS  565 (580)
T ss_pred             CHHHHHHHHHHHcCCCHHHEEEEecchhhHHHHHHCCC-EEEeCCCCHHHHHhCCEEeCC
Confidence            44566778888999999999999999999999999998 477877755  4557887654

>TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family

Probab=95.22  E-value=0.14  Score=44.83  Aligned_cols=86  Identities=19%  Similarity=0.205  Sum_probs=56.5

Q ss_pred             CCCChhHHHHHhcCC---CCeEEEeCCC---hHHHHHHHHHcCCccccceeEeeccCCCCCCCCCCCCCcccccCCcccc
Q 027403           55 LKPDPVLRNLLLSMP---QRKIIFTNAD---QKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQR  128 (224)
Q Consensus        55 ~~~~~g~~~~L~~l~---~~~~I~Tn~~---~~~~~~~l~~lgl~~~fd~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~  128 (224)
                      -.++||+.++|+.|+   .+++++||++   +......++.+|+..-.+.|+++...                       
T Consensus        17 ~~~~~ga~e~l~~L~~~g~~~~~~Tnns~~~~~~~~~~l~~~G~~~~~~~i~ts~~~-----------------------   73 (279)
T TIGR01452        17 ERVVPGAPELLDRLARAGKAALFVTNNSTKSRAEYALKFARLGFNGLAEQLFSSALC-----------------------   73 (279)
T ss_pred             CeeCcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCCChhhEecHHHH-----------------------
Confidence            357889999999886   5788999965   44555678889986445556655432                       


Q ss_pred             ccCCCCHHHHHHHHHHhCCCCCcEEEEeCChhcHHHHHHcCCeEE
Q 027403          129 ILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTV  173 (224)
Q Consensus       129 ~~~KP~~~~~~~al~~~~~~~~~~l~VgDs~~Di~~A~~~G~~~v  173 (224)
                               ....+++......+++++|+.. -.......|+..+
T Consensus        74 ---------~~~~l~~~~~~~~~v~~iG~~~-~~~~l~~~g~~~~  108 (279)
T TIGR01452        74 ---------AARLLRQPPDAPKAVYVIGEEG-LRAELDAAGIRLA  108 (279)
T ss_pred             ---------HHHHHHhhCcCCCEEEEEcCHH-HHHHHHHCCCEEe
Confidence                     2244555444456799999862 2334456787754

This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association.

>COG4996 Predicted phosphatase [General function prediction only]

Probab=95.10  E-value=0.03  Score=44.49  Aligned_cols=82  Identities=20%  Similarity=0.274  Sum_probs=58.6

Q ss_pred             CCCChhHHHHHhcCCCCeEEEeCCCh---HHHHHHHHHcCCccccceeEeeccCCCCCCCCCCCCCcccccCCccccccC
Q 027403           55 LKPDPVLRNLLLSMPQRKIIFTNADQ---KHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILC  131 (224)
Q Consensus        55 ~~~~~g~~~~L~~l~~~~~I~Tn~~~---~~~~~~l~~lgl~~~fd~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  131 (224)
                      +.++|.++++|+.++-.+.|+|..+.   .-+.+.|..+++..||+-++.                              
T Consensus        40 v~L~~~v~~~l~warnsG~i~~~~sWN~~~kA~~aLral~~~~yFhy~Vi------------------------------   89 (164)
T COG4996          40 VHLFPDVKETLKWARNSGYILGLASWNFEDKAIKALRALDLLQYFHYIVI------------------------------   89 (164)
T ss_pred             EEEcHHHHHHHHHHHhCCcEEEEeecCchHHHHHHHHHhchhhhEEEEEe------------------------------
Confidence            56899999999999977776666544   566778888999999997552                              


Q ss_pred             CCCHH---HHHHHHHHhC------CCCCcEEEEeCChhcHHHHH
Q 027403          132 KPSLE---AIETAIRIAN------VDPKKTIFFDDSARNIASAK  166 (224)
Q Consensus       132 KP~~~---~~~~al~~~~------~~~~~~l~VgDs~~Di~~A~  166 (224)
                      +|+|.   +..++++..+      ++|.+++|++|..-.+.--+
T Consensus        90 ePhP~K~~ML~~llr~i~~er~~~ikP~~Ivy~DDR~iH~~~Iw  133 (164)
T COG4996          90 EPHPYKFLMLSQLLREINTERNQKIKPSEIVYLDDRRIHFGNIW  133 (164)
T ss_pred             cCCChhHHHHHHHHHHHHHhhccccCcceEEEEecccccHHHHH
Confidence            44433   3344555543      58999999999875544433

>KOG2961 consensus Predicted hydrolase (HAD superfamily) [General function prediction only]

Probab=95.09  E-value=0.11  Score=42.28  Aligned_cols=97  Identities=19%  Similarity=0.255  Sum_probs=63.3

Q ss_pred             CCCCCChhHHHHHhcCC-----CCeEEEeCCCh--------HHHHHHHHHcCCccccceeEeeccCCCCCCCCCCCCCcc
Q 027403           53 EKLKPDPVLRNLLLSMP-----QRKIIFTNADQ--------KHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIE  119 (224)
Q Consensus        53 ~~~~~~~g~~~~L~~l~-----~~~~I~Tn~~~--------~~~~~~l~~lgl~~~fd~ii~~~~~~~~~~~~~~~~~~~  119 (224)
                      .....+|....-+++++     ..++++||+.-        +.+...-...|+.     |+- ....             
T Consensus        58 ~~~~Iwp~~l~~ie~~~~vygek~i~v~SNsaG~~~~D~d~s~Ak~le~k~gIp-----VlR-Hs~k-------------  118 (190)
T KOG2961|consen   58 YSLAIWPPLLPSIERCKAVYGEKDIAVFSNSAGLTEYDHDDSKAKALEAKIGIP-----VLR-HSVK-------------  118 (190)
T ss_pred             cccccCchhHHHHHHHHHHhCcccEEEEecCcCccccCCchHHHHHHHHhhCCc-----eEe-eccc-------------
Confidence            34677888777777776     56889999742        2222222233432     111 1111             


Q ss_pred             cccCCccccccCCCC--HHHHHHHHHHhC-CCCCcEEEEeCCh-hcHHHHHHcCCeEEEECCCCC
Q 027403          120 NNSFSSNQRILCKPS--LEAIETAIRIAN-VDPKKTIFFDDSA-RNIASAKAAGLHTVIVGSSVP  180 (224)
Q Consensus       120 ~~~~~~~~~~~~KP~--~~~~~~al~~~~-~~~~~~l~VgDs~-~Di~~A~~~G~~~v~v~~~~~  180 (224)
                                  ||.  .+.++....... .++++++||||.. .||.-|+.+|--.||+..|..
T Consensus       119 ------------KP~ct~E~~~y~~~Nshv~~~se~~~vGDRlfTDI~~aN~mGs~gVw~~~gv~  171 (190)
T KOG2961|consen  119 ------------KPACTAEEVEYHFGNSHVCTSSELIMVGDRLFTDIVYANRMGSLGVWTEPGVR  171 (190)
T ss_pred             ------------CCCccHHHHHHHhCCcccCChhHeEEEccchhhhHhhhhhccceeEEeccccc
Confidence                        443  555555443333 4789999999998 599999999999999999875

>TIGR01523 ATPase-IID_K-Na potassium and/or sodium efflux P-type ATPase, fungal-type

Probab=94.93  E-value=0.15  Score=53.09  Aligned_cols=135  Identities=13%  Similarity=0.090  Sum_probs=79.8

Q ss_pred             CCChhHHHHHhcCC---CCeEEEeCCChHHHHHHHHHcCCccc-c---------ceeEeeccCCCCCCCCCCCCCccccc
Q 027403           56 KPDPVLRNLLLSMP---QRKIIFTNADQKHAMEVLGRLGLEDC-F---------EGIICFETINPRLQPADNTDGIENNS  122 (224)
Q Consensus        56 ~~~~g~~~~L~~l~---~~~~I~Tn~~~~~~~~~l~~lgl~~~-f---------d~ii~~~~~~~~~~~~~~~~~~~~~~  122 (224)
                      ++.|+++++++.|+   .+++++|+-...-+..+-+.+|+.+- +         ..++++.+...... ........   
T Consensus       646 p~r~~v~~aI~~l~~aGIkv~MiTGD~~~tA~~iA~~~Gi~~~~~~~~~~~~~~~~vitG~~l~~l~~-~~l~~~~~---  721 (1053)
T TIGR01523       646 PPRNESAGAVEKCHQAGINVHMLTGDFPETAKAIAQEVGIIPPNFIHDRDEIMDSMVMTGSQFDALSD-EEVDDLKA---  721 (1053)
T ss_pred             CCchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCccccccccccccceeeehHHhhhcCH-HHHHHHhh---
Confidence            57789999999886   78889999999999999999998531 1         12444433221000 00000000   


Q ss_pred             CCccccccCCCCHHHHHHHHHHhCCCCCcEEEEeCChhcHHHHHHcCCeEEEEC-CCCC--CCCCceEeC--CHhHHHHH
Q 027403          123 FSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVG-SSVP--VPPADHALN--SIHNIKEA  197 (224)
Q Consensus       123 ~~~~~~~~~KP~~~~~~~al~~~~~~~~~~l~VgDs~~Di~~A~~~G~~~v~v~-~~~~--~~~~d~~i~--~~~dl~~~  197 (224)
                         +...-+.-.|+-=..+.+.++-.-..|.|+||+.||.-+-+.+.+- |.++ .|..  ..-+|+++.  +|..+...
T Consensus       722 ---~~~V~ar~sP~~K~~iV~~lq~~g~~Vam~GDGvNDapaLk~AdVG-IAmg~~gt~vak~aADivl~dd~f~~I~~~  797 (1053)
T TIGR01523       722 ---LCLVIARCAPQTKVKMIEALHRRKAFCAMTGDGVNDSPSLKMANVG-IAMGINGSDVAKDASDIVLSDDNFASILNA  797 (1053)
T ss_pred             ---cCeEEEecCHHHHHHHHHHHHhcCCeeEEeCCCcchHHHHHhCCcc-EecCCCccHHHHHhcCEEEecCCHHHHHHH
Confidence               0000012222222233333333346799999999999999998875 4444 3333  345788874  47777776


Q ss_pred             H
Q 027403          198 I  198 (224)
Q Consensus       198 i  198 (224)
                      +
T Consensus       798 i  798 (1053)
T TIGR01523       798 I  798 (1053)
T ss_pred             H
Confidence            5

The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump.

>PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional

Probab=94.68  E-value=0.097  Score=52.14  Aligned_cols=67  Identities=16%  Similarity=0.100  Sum_probs=51.4

Q ss_pred             CCCHHHHHHHHHHhCCCCCcEEEEeCChhcHHHHHHcC--CeEEEECCCCCCCCCceEeCCHhHHHHHHHHHH
Q 027403          132 KPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAG--LHTVIVGSSVPVPPADHALNSIHNIKEAIPEIW  202 (224)
Q Consensus       132 KP~~~~~~~al~~~~~~~~~~l~VgDs~~Di~~A~~~G--~~~v~v~~~~~~~~~d~~i~~~~dl~~~i~~~~  202 (224)
                      -.|..+...+++  +.+++.++++||+.+|+..-+.++  ..+|.++.  ....++|++++..++.++|..+.
T Consensus       656 vnKG~al~~ll~--~~~~d~vl~~GD~~nDe~Mf~~~~~~~~~v~vG~--~~s~A~~~l~~~~eV~~~L~~l~  724 (726)
T PRK14501        656 VNKGRAVRRLLE--AGPYDFVLAIGDDTTDEDMFRALPETAITVKVGP--GESRARYRLPSQREVRELLRRLL  724 (726)
T ss_pred             CCHHHHHHHHHh--cCCCCEEEEECCCCChHHHHHhcccCceEEEECC--CCCcceEeCCCHHHHHHHHHHHh
Confidence            345566666666  677899999999999999998874  34455544  46779999999999888887765

>PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed

Probab=94.59  E-value=0.17  Score=44.01  Aligned_cols=71  Identities=11%  Similarity=0.040  Sum_probs=52.2

Q ss_pred             CCCCHHHHHHHHHHhCC---CCCcEEEEeCChhcHHHHHHcCCeEEEECCCCC--------CCCCceEeCCHh--HHHHH
Q 027403          131 CKPSLEAIETAIRIANV---DPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP--------VPPADHALNSIH--NIKEA  197 (224)
Q Consensus       131 ~KP~~~~~~~al~~~~~---~~~~~l~VgDs~~Di~~A~~~G~~~v~v~~~~~--------~~~~d~~i~~~~--dl~~~  197 (224)
                      +-.+....+.+++.+|+   ++++++.|||+.||+..-+.+|.. |.+.+...        ...++|+.+...  .+.+.
T Consensus       185 g~sKg~al~~l~~~lgi~~~~~~~viafGDs~NDi~Ml~~ag~g-vAM~~~~~~~~~l~~~~~~~~~~~~~~~~~g~~~~  263 (271)
T PRK03669        185 SAGKDQAANWLIATYQQLSGTRPTTLGLGDGPNDAPLLDVMDYA-VVVKGLNREGVHLQDDDPARVYRTQREGPEGWREG  263 (271)
T ss_pred             CCCHHHHHHHHHHHHHhhcCCCceEEEEcCCHHHHHHHHhCCEE-EEecCCCCCCcccccccCCceEeccCCCcHHHHHH
Confidence            36678889999999999   999999999999999999999974 66654331        224666655533  45555


Q ss_pred             HHHHH
Q 027403          198 IPEIW  202 (224)
Q Consensus       198 i~~~~  202 (224)
                      +..++
T Consensus       264 l~~~~  268 (271)
T PRK03669        264 LDHFF  268 (271)
T ss_pred             HHHHH
Confidence            44443

>TIGR01658 EYA-cons_domain eyes absent protein conserved domain

Probab=94.07  E-value=0.33  Score=42.43  Aligned_cols=81  Identities=10%  Similarity=0.056  Sum_probs=62.4

Q ss_pred             eEEEeCCChHHHHHHHHHcCCccccc--eeEeeccCCCCCCCCCCCCCcccccCCccccccCCCCHHHHHHHHHHhCCCC
Q 027403           72 KIIFTNADQKHAMEVLGRLGLEDCFE--GIICFETINPRLQPADNTDGIENNSFSSNQRILCKPSLEAIETAIRIANVDP  149 (224)
Q Consensus        72 ~~I~Tn~~~~~~~~~l~~lgl~~~fd--~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~~~~~~~al~~~~~~~  149 (224)
                      .+++|++.---....+--+||.++|.  .|+++..++                           +..-|+.+.+++|-+.
T Consensus       178 NvLVTs~qLVPaLaKcLLy~L~~~f~ieNIYSa~kvG---------------------------K~~cFe~I~~Rfg~p~  230 (274)
T TIGR01658       178 NVLVTSGQLIPSLAKCLLFRLDTIFRIENVYSSIKVG---------------------------KLQCFKWIKERFGHPK  230 (274)
T ss_pred             EEEEEcCccHHHHHHHHHhccCCccccccccchhhcc---------------------------hHHHHHHHHHHhCCCC
Confidence            45777766433333444567878876  477766654                           6789999999999877


Q ss_pred             CcEEEEeCChhcHHHHHHcCCeEEEECCCC
Q 027403          150 KKTIFFDDSARNIASAKAAGLHTVIVGSSV  179 (224)
Q Consensus       150 ~~~l~VgDs~~Di~~A~~~G~~~v~v~~~~  179 (224)
                      -.-+.|||+..--.+|+..+++++-|....
T Consensus       231 ~~f~~IGDG~eEe~aAk~l~wPFw~I~~h~  260 (274)
T TIGR01658       231 VRFCAIGDGWEECTAAQAMNWPFVKIDLHP  260 (274)
T ss_pred             ceEEEeCCChhHHHHHHhcCCCeEEeecCC
Confidence            788999999999999999999999997654

This domain is common to all eyes absent (EYA) homologs. Metazoan EYA's also contain a variable N-terminal domain consisting largely of low-complexity sequences.

>PF11019 DUF2608: Protein of unknown function (DUF2608); InterPro: IPR022565 This family is conserved in Bacteria

Probab=94.02  E-value=1.1  Score=39.12  Aligned_cols=120  Identities=18%  Similarity=0.202  Sum_probs=72.0

Q ss_pred             CChhHHHHHhcCC---CCeEEEeCCCh---HHHHHHHHHcCCccccceeEeeccCCCCCCCCCCCCCcccccCCcccccc
Q 027403           57 PDPVLRNLLLSMP---QRKIIFTNADQ---KHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRIL  130 (224)
Q Consensus        57 ~~~g~~~~L~~l~---~~~~I~Tn~~~---~~~~~~l~~lgl~~~fd~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  130 (224)
                      .-+++.++++.|+   .+++.+|.++.   .+..+.|+.+|+.  |..-...++....+.  ...+.....-++-.|++.
T Consensus        82 ie~~~~~~i~~lq~~~~~v~alT~~~~~~~~~t~~~Lk~~gi~--fs~~~~~~~~~~~~~--~~~~~~~~~~~~~~GIlf  157 (252)
T PF11019_consen   82 IESDVPNIINSLQNKGIPVIALTARGPNMEDWTLRELKSLGID--FSSSSFPEDGIISFP--VFDSALSRAPSFYDGILF  157 (252)
T ss_pred             cchhHHHHHHHHHHCCCcEEEEcCCChhhHHHHHHHHHHCCCC--ccccccccCcceecc--cccCCCCCCceeecCeEE
Confidence            3456777777775   66888998875   5666777788874  332111111000000  000000011111111111


Q ss_pred             --CCCCHHHHHHHHHHhCCCCCcEEEEeCChhcHHH----HHHcCCeEEEECCCCC
Q 027403          131 --CKPSLEAIETAIRIANVDPKKTIFFDDSARNIAS----AKAAGLHTVIVGSSVP  180 (224)
Q Consensus       131 --~KP~~~~~~~al~~~~~~~~~~l~VgDs~~Di~~----A~~~G~~~v~v~~~~~  180 (224)
                        +-++..++...+.+.|..|+.++||+|+..++.+    +++.|+.++++.....
T Consensus       158 t~~~~KG~~L~~fL~~~~~~pk~IIfIDD~~~nl~sv~~a~k~~~I~f~G~~Yt~~  213 (252)
T PF11019_consen  158 TGGQDKGEVLKYFLDKINQSPKKIIFIDDNKENLKSVEKACKKSGIDFIGFHYTGA  213 (252)
T ss_pred             eCCCccHHHHHHHHHHcCCCCCeEEEEeCCHHHHHHHHHHHhhCCCcEEEEEEcch
Confidence              3667799999999999999999999999977654    4556889888876644

The function is not known.

>TIGR01106 ATPase-IIC_X-K sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit

Probab=94.02  E-value=0.25  Score=51.04  Aligned_cols=138  Identities=11%  Similarity=0.098  Sum_probs=77.8

Q ss_pred             CCChhHHHHHhcCC---CCeEEEeCCChHHHHHHHHHcCCccccc------------------------eeEeeccCCCC
Q 027403           56 KPDPVLRNLLLSMP---QRKIIFTNADQKHAMEVLGRLGLEDCFE------------------------GIICFETINPR  108 (224)
Q Consensus        56 ~~~~g~~~~L~~l~---~~~~I~Tn~~~~~~~~~l~~lgl~~~fd------------------------~ii~~~~~~~~  108 (224)
                      ++.+++++.++.++   .+++++|+.+...+....+.+|+.+--.                        .++++.+....
T Consensus       568 plr~~v~~aI~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~vi~G~~l~~l  647 (997)
T TIGR01106       568 PPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKGVGIISEGNETVEDIAARLNIPVSQVNPRDAKACVVHGSDLKDM  647 (997)
T ss_pred             CChHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCCCccchhhhhhhccccccccccccccceEEEhHHhhhC
Confidence            57789999999986   6788999999999999999999842100                        12332222110


Q ss_pred             CCCCCCCCCcccccCCccccccCCCCHHHHHHHHHHhCCCCCcEEEEeCChhcHHHHHHcCCeEEEEC-CCCC--CCCCc
Q 027403          109 LQPADNTDGIENNSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVG-SSVP--VPPAD  185 (224)
Q Consensus       109 ~~~~~~~~~~~~~~~~~~~~~~~KP~~~~~~~al~~~~~~~~~~l~VgDs~~Di~~A~~~G~~~v~v~-~~~~--~~~~d  185 (224)
                      .. ....... .++  .. +.-+.-.|+-=..+.+.++-...-|.++||+.||+-+-+.+.+- +.++ .|..  ..-+|
T Consensus       648 ~~-~el~~~~-~~~--~~-~VfaR~sPeqK~~IV~~lq~~g~vv~~~GDG~ND~paLk~AdVG-iamg~~G~~vak~aAD  721 (997)
T TIGR01106       648 TS-EQLDEIL-KYH--TE-IVFARTSPQQKLIIVEGCQRQGAIVAVTGDGVNDSPALKKADIG-VAMGIAGSDVSKQAAD  721 (997)
T ss_pred             CH-HHHHHHH-Hhc--CC-EEEEECCHHHHHHHHHHHHHCCCEEEEECCCcccHHHHhhCCcc-eecCCcccHHHHHhhc
Confidence            00 0000000 000  00 01112222222233333332335799999999999999988774 4433 2332  34478


Q ss_pred             eEeCC--HhHHHHHHH
Q 027403          186 HALNS--IHNIKEAIP  199 (224)
Q Consensus       186 ~~i~~--~~dl~~~i~  199 (224)
                      +++.+  |..+.+.+.
T Consensus       722 ivL~dd~f~~Iv~ai~  737 (997)
T TIGR01106       722 MILLDDNFASIVTGVE  737 (997)
T ss_pred             eEEecCCHHHHHHHHH
Confidence            88765  777777663

Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps.

>COG3700 AphA Acid phosphatase (class B) [General function prediction only]

Probab=94.02  E-value=0.075  Score=44.44  Aligned_cols=43  Identities=28%  Similarity=0.375  Sum_probs=33.5

Q ss_pred             CCCHHHH--HHHHHHhCCCCCcEEEEeCChhcHHHHHHcCCeEEEECCC
Q 027403          132 KPSLEAI--ETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSS  178 (224)
Q Consensus       132 KP~~~~~--~~al~~~~~~~~~~l~VgDs~~Di~~A~~~G~~~v~v~~~  178 (224)
                      ||+|.-|  ...++..++.    ++-|||-+||.+|+.+|++.+.+.+.
T Consensus       169 k~k~~qy~Kt~~i~~~~~~----IhYGDSD~Di~AAkeaG~RgIRilRA  213 (237)
T COG3700         169 KPKPGQYTKTQWIQDKNIR----IHYGDSDNDITAAKEAGARGIRILRA  213 (237)
T ss_pred             CCCcccccccHHHHhcCce----EEecCCchhhhHHHhcCccceeEEec
Confidence            5555544  3466666654    99999999999999999999988654

>PLN02580 trehalose-phosphatase

Probab=93.81  E-value=0.3  Score=45.26  Aligned_cols=70  Identities=16%  Similarity=0.152  Sum_probs=54.9

Q ss_pred             CCHHHHHHHHHHhCCCCCc---EEEEeCChhcHHHHHH-----cCCeEEEECCCCCCCCCceEeCCHhHHHHHHHHHHh
Q 027403          133 PSLEAIETAIRIANVDPKK---TIFFDDSARNIASAKA-----AGLHTVIVGSSVPVPPADHALNSIHNIKEAIPEIWE  203 (224)
Q Consensus       133 P~~~~~~~al~~~~~~~~~---~l~VgDs~~Di~~A~~-----~G~~~v~v~~~~~~~~~d~~i~~~~dl~~~i~~~~~  203 (224)
                      -+-.+.+.+++.++++..+   .+||||..+|..+-+.     .| ..|.|..+.....+.|.+++..++.++|..+..
T Consensus       301 ~KG~Av~~Ll~~~g~~~~d~~~pi~iGDD~TDedmF~~L~~~~~G-~~I~Vgn~~~~t~A~y~L~dp~eV~~~L~~L~~  378 (384)
T PLN02580        301 NKGKAVEFLLESLGLSNCDDVLPIYIGDDRTDEDAFKVLREGNRG-YGILVSSVPKESNAFYSLRDPSEVMEFLKSLVT  378 (384)
T ss_pred             CHHHHHHHHHHhcCCCcccceeEEEECCCchHHHHHHhhhccCCc-eEEEEecCCCCccceEEcCCHHHHHHHHHHHHH
Confidence            4567778888888887553   3899999999888775     24 357777766677899999999999999987654

>COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only]

Probab=93.69  E-value=0.17  Score=43.52  Aligned_cols=72  Identities=22%  Similarity=0.275  Sum_probs=52.4

Q ss_pred             cCCCCHHHHHHHHHHhCCCCCcEEEEeCChhcHHHHHHcCCeEEEECCCCC--CCCCceEe--CCHhHHHHHHHHHH
Q 027403          130 LCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP--VPPADHAL--NSIHNIKEAIPEIW  202 (224)
Q Consensus       130 ~~KP~~~~~~~al~~~~~~~~~~l~VgDs~~Di~~A~~~G~~~v~v~~~~~--~~~~d~~i--~~~~dl~~~i~~~~  202 (224)
                      .+-.+......+++.+|+++++++.|||+.||+..-..+|.. |.+.+..+  ...++++.  ++=.-+.+.|..++
T Consensus       186 ~g~~K~~al~~l~~~lgi~~~~v~afGD~~ND~~Ml~~ag~g-vam~Na~~~~k~~A~~vt~~n~~~Gv~~~l~~~~  261 (264)
T COG0561         186 KGVSKGYALQRLAKLLGIKLEEVIAFGDSTNDIEMLEVAGLG-VAMGNADEELKELADYVTTSNDEDGVAEALEKLL  261 (264)
T ss_pred             CCCchHHHHHHHHHHhCCCHHHeEEeCCccccHHHHHhcCee-eeccCCCHHHHhhCCcccCCccchHHHHHHHHHh
Confidence            356678899999999999999999999999999999988885 66766643  33345432  23344555555443

>TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family

Probab=93.44  E-value=0.14  Score=44.08  Aligned_cols=48  Identities=17%  Similarity=0.131  Sum_probs=41.6

Q ss_pred             CCCCHHHHHHHHHHhCCC--CCcEEEEeCChhcHHHHHHcCCeEEEECCCC
Q 027403          131 CKPSLEAIETAIRIANVD--PKKTIFFDDSARNIASAKAAGLHTVIVGSSV  179 (224)
Q Consensus       131 ~KP~~~~~~~al~~~~~~--~~~~l~VgDs~~Di~~A~~~G~~~v~v~~~~  179 (224)
                      +-.+......+++.++++  ++++++|||+.||+...+.+|.. +.+.+..
T Consensus       174 ~~~Kg~ai~~l~~~~~i~~~~~~~~a~GD~~ND~~Ml~~ag~~-vam~Na~  223 (256)
T TIGR01486       174 GSDKGKAANALKQFYNQPGGAIKVVGLGDSPNDLPLLEVVDLA-VVVPGPN  223 (256)
T ss_pred             CCCHHHHHHHHHHHHhhcCCCceEEEEcCCHhhHHHHHHCCEE-EEeCCCC
Confidence            366788899999999999  99999999999999999999986 6666654

This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta

>TIGR01680 Veg_Stor_Prot vegetative storage protein

Probab=92.59  E-value=0.95  Score=40.13  Aligned_cols=102  Identities=10%  Similarity=0.076  Sum_probs=62.1

Q ss_pred             CCCCCChhHHHHHhcCC---CCeEEEeCCCh---HHHHHHHHHcCCccccceeEeeccCCCCCCCCCCCCCcccccCCcc
Q 027403           53 EKLKPDPVLRNLLLSMP---QRKIIFTNADQ---KHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSN  126 (224)
Q Consensus        53 ~~~~~~~g~~~~L~~l~---~~~~I~Tn~~~---~~~~~~l~~lgl~~~fd~ii~~~~~~~~~~~~~~~~~~~~~~~~~~  126 (224)
                      ...++.|++.++++.++   .+++++||++.   +.....|...|+.. ++.++.-.....+                  
T Consensus       142 ~~ApAlp~al~ly~~l~~~G~kIf~VSgR~e~~r~aT~~NL~kaGy~~-~~~LiLR~~~D~~------------------  202 (275)
T TIGR01680       142 GEAPALPETLKNYNKLVSLGFKIIFLSGRLKDKQAVTEANLKKAGYHT-WEKLILKDPQDNS------------------  202 (275)
T ss_pred             ccCCCChHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHHcCCCC-cceeeecCCCCCc------------------
Confidence            35678899999998886   67889999985   45667777778754 3655543221111                  


Q ss_pred             ccccCCCCHHHHHHHHHHhCC--CCCcEEEEeCChhcHHHHHHcCCeEEEECCC
Q 027403          127 QRILCKPSLEAIETAIRIANV--DPKKTIFFDDSARNIASAKAAGLHTVIVGSS  178 (224)
Q Consensus       127 ~~~~~KP~~~~~~~al~~~~~--~~~~~l~VgDs~~Di~~A~~~G~~~v~v~~~  178 (224)
                           +.+.-.|+...++--+  .-.=+..|||..+|+.+....+-++.-.++|
T Consensus       203 -----~~~av~yKs~~R~~li~eGYrIv~~iGDq~sDl~G~~~g~~RtFKLPNP  251 (275)
T TIGR01680       203 -----AENAVEYKTAARAKLIQEGYNIVGIIGDQWNDLKGEHRGAIRSFKLPNP  251 (275)
T ss_pred             -----cchhHHHHHHHHHHHHHcCceEEEEECCCHHhccCCCccCcceecCCCc
Confidence                 3333334333222111  1233688999999997765333566666555

The proteins represented by this model are close relatives of the plant acid phosphatases (TIGR01675), are limited to members of the Phaseoleae including Glycine max (soybean) and Phaseolus vulgaris (kidney bean). These proteins are highly expressed in the leaves of repeatedly depodded plants. VSP differs most strinkingly from the acid phosphatases in the lack of the conserved nucleophilic aspartate residue in the N-terminus, thus, they should be inactive as phosphatases. This issue was confused by the publication in 1992 of an article claiming activity for the Glycine max VSP. In 1994 this assertion was refuted by the separation of the activity from the VSP.

>COG2503 Predicted secreted acid phosphatase [General function prediction only]

Probab=92.52  E-value=0.63  Score=40.67  Aligned_cols=96  Identities=19%  Similarity=0.261  Sum_probs=62.6

Q ss_pred             cCCCCHHHHHHHHhccCCCCCCCCChhHHHHHhcCC---CCeEEEeCCChHH----HHHHHHHcCCccccce-eEeeccC
Q 027403           34 GYEFDNDEFHAFVHGKLPYEKLKPDPVLRNLLLSMP---QRKIIFTNADQKH----AMEVLGRLGLEDCFEG-IICFETI  105 (224)
Q Consensus        34 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~L~~l~---~~~~I~Tn~~~~~----~~~~l~~lgl~~~fd~-ii~~~~~  105 (224)
                      +.+++++....++..    ...++.||+.++|....   ..+.-+||+.++.    ...-|.++|+...-+. ++.-.+ 
T Consensus       104 nk~f~pe~Wd~wV~a----~~sk~vpGA~eFl~Yvn~~Gg~ifyiSNR~~~~~~~~T~~nLk~~g~~~~~~~~~llkk~-  178 (274)
T COG2503         104 NKGFTPETWDKWVQA----KKSKAVPGAVEFLNYVNSNGGKIFYISNRDQENEKDGTIENLKSEGLPQVLESHLLLKKD-  178 (274)
T ss_pred             CCCCCccchHHHHhh----cccccCccHHHHHHHHHhcCcEEEEEeccchhcccchhHHHHHHcCcccccccceEEeeC-
Confidence            455666666665554    45689999999999997   5677999988754    6677788887654432 222211 


Q ss_pred             CCCCCCCCCCCCcccccCCccccccCCCCHHHHHHHHHHhCCCCCcEEEEeCChhcHH
Q 027403          106 NPRLQPADNTDGIENNSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIA  163 (224)
Q Consensus       106 ~~~~~~~~~~~~~~~~~~~~~~~~~~KP~~~~~~~al~~~~~~~~~~l~VgDs~~Di~  163 (224)
                                               .||+..=+..+.+    +-+=|++|||...|..
T Consensus       179 -------------------------~k~Ke~R~~~v~k----~~~iVm~vGDNl~DF~  207 (274)
T COG2503         179 -------------------------KKSKEVRRQAVEK----DYKIVMLVGDNLDDFG  207 (274)
T ss_pred             -------------------------CCcHHHHHHHHhh----ccceeeEecCchhhhc
Confidence                                     1444444444444    4456899999987654

>KOG0207 consensus Cation transport ATPase [Inorganic ion transport and metabolism]

Probab=92.50  E-value=0.94  Score=46.09  Aligned_cols=103  Identities=18%  Similarity=0.275  Sum_probs=64.7

Q ss_pred             HHHHHhcCCCCeEEEeCCChHHHHHHHHHcCCccccceeEeeccCCCCCCCCCCCCCcccccCCccccccCCCCHHHHHH
Q 027403           61 LRNLLLSMPQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCKPSLEAIET  140 (224)
Q Consensus        61 ~~~~L~~l~~~~~I~Tn~~~~~~~~~l~~lgl~~~fd~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~~~~~~~  140 (224)
                      +...|+++..+++++|+-.+..++.+-+++|    ++.|++ +-                           +|....  .
T Consensus       731 av~~Lk~~Gi~v~mLTGDn~~aA~svA~~VG----i~~V~a-ev---------------------------~P~~K~--~  776 (951)
T KOG0207|consen  731 AVAELKSMGIKVVMLTGDNDAAARSVAQQVG----IDNVYA-EV---------------------------LPEQKA--E  776 (951)
T ss_pred             HHHHHHhcCceEEEEcCCCHHHHHHHHHhhC----cceEEe-cc---------------------------CchhhH--H
Confidence            3445566668999999999999999999999    444332 21                           443321  3


Q ss_pred             HHHHhCCCCCcEEEEeCChhcHHHHHHcCCeEEEECCCCC--CCCCceE--eCCHhHHHHHH
Q 027403          141 AIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP--VPPADHA--LNSIHNIKEAI  198 (224)
Q Consensus       141 al~~~~~~~~~~l~VgDs~~Di~~A~~~G~~~v~v~~~~~--~~~~d~~--i~~~~dl~~~i  198 (224)
                      .+++++.....+.||||+.||--+-..+.+- +.+..|..  ..-+|++  -+++.++...+
T Consensus       777 ~Ik~lq~~~~~VaMVGDGINDaPALA~AdVG-Iaig~gs~vAieaADIVLmrn~L~~v~~ai  837 (951)
T KOG0207|consen  777 KIKEIQKNGGPVAMVGDGINDAPALAQADVG-IAIGAGSDVAIEAADIVLMRNDLRDVPFAI  837 (951)
T ss_pred             HHHHHHhcCCcEEEEeCCCCccHHHHhhccc-eeeccccHHHHhhCCEEEEccchhhhHHHH
Confidence            3445554557799999999985544444332 33444432  3345664  46677776655

>PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming]

Probab=92.18  E-value=0.63  Score=47.45  Aligned_cols=72  Identities=11%  Similarity=0.073  Sum_probs=54.4

Q ss_pred             CCCHHHHHHHHHH---hCCCCCcEEEEeCChhcHHHHHHcC-------------CeEEEECCCCCCCCCceEeCCHhHHH
Q 027403          132 KPSLEAIETAIRI---ANVDPKKTIFFDDSARNIASAKAAG-------------LHTVIVGSSVPVPPADHALNSIHNIK  195 (224)
Q Consensus       132 KP~~~~~~~al~~---~~~~~~~~l~VgDs~~Di~~A~~~G-------------~~~v~v~~~~~~~~~d~~i~~~~dl~  195 (224)
                      -.|..+.+.+++.   .|..++.+++|||..+|...-+.++             ..+|.|+.  ....|.|.+++..++.
T Consensus       761 vnKG~Al~~Ll~~~~~~g~~~d~vl~~GDD~nDedMF~~~~~~~~g~~~~~~~~~~~v~VG~--~~S~A~y~L~d~~eV~  838 (854)
T PLN02205        761 VSKGLVAKRLLSIMQERGMLPDFVLCIGDDRSDEDMFEVITSSMAGPSIAPRAEVFACTVGQ--KPSKAKYYLDDTAEIV  838 (854)
T ss_pred             CCHHHHHHHHHHHHHhcCCCcccEEEEcCCccHHHHHHHhhhhccCCcccccccceeEEECC--CCccCeEecCCHHHHH
Confidence            3455666666643   5888999999999999988777665             34556654  4577999999999999


Q ss_pred             HHHHHHHhhc
Q 027403          196 EAIPEIWEGE  205 (224)
Q Consensus       196 ~~i~~~~~~~  205 (224)
                      +++..+....
T Consensus       839 ~lL~~L~~~~  848 (854)
T PLN02205        839 RLMQGLASVS  848 (854)
T ss_pred             HHHHHHHhcc
Confidence            9998877543

>KOG3107 consensus Predicted haloacid dehalogenase-like hydrolase (eyes absent) [General function prediction only]

Probab=92.06  E-value=1.3  Score=41.02  Aligned_cols=79  Identities=16%  Similarity=0.135  Sum_probs=59.2

Q ss_pred             eEEEeCCChHHHHHHHHHcCCccccc--eeEeeccCCCCCCCCCCCCCcccccCCccccccCCCCHHHHHHHHHHhCCCC
Q 027403           72 KIIFTNADQKHAMEVLGRLGLEDCFE--GIICFETINPRLQPADNTDGIENNSFSSNQRILCKPSLEAIETAIRIANVDP  149 (224)
Q Consensus        72 ~~I~Tn~~~~~~~~~l~~lgl~~~fd--~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~~~~~~~al~~~~~~~  149 (224)
                      .+++|+..---....+--+||...|.  .|.++..++                           +..-|+.+.+++|- .
T Consensus       373 nVlvTttqLipalaKvLL~gLg~~fpiENIYSa~kiG---------------------------KescFerI~~RFg~-K  424 (468)
T KOG3107|consen  373 NVLVTTTQLIPALAKVLLYGLGSSFPIENIYSATKIG---------------------------KESCFERIQSRFGR-K  424 (468)
T ss_pred             EEEEeccchhHHHHHHHHHhcCCcccchhhhhhhhcc---------------------------HHHHHHHHHHHhCC-c
Confidence            56888876543444444567766665  477777665                           56789999999996 4


Q ss_pred             CcEEEEeCChhcHHHHHHcCCeEEEECCC
Q 027403          150 KKTIFFDDSARNIASAKAAGLHTVIVGSS  178 (224)
Q Consensus       150 ~~~l~VgDs~~Di~~A~~~G~~~v~v~~~  178 (224)
                      -.-++|||+..--.+|++.+|++.-|...
T Consensus       425 ~~yvvIgdG~eee~aAK~ln~PfwrI~~h  453 (468)
T KOG3107|consen  425 VVYVVIGDGVEEEQAAKALNMPFWRISSH  453 (468)
T ss_pred             eEEEEecCcHHHHHHHHhhCCceEeeccC
Confidence            55678999999999999999998888654

>TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase

Probab=91.62  E-value=0.29  Score=41.68  Aligned_cols=39  Identities=13%  Similarity=0.167  Sum_probs=31.0

Q ss_pred             CHHHHHHHHHHhCC--CCCcEEEEeCChhcHHHHHHcCCeE
Q 027403          134 SLEAIETAIRIANV--DPKKTIFFDDSARNIASAKAAGLHT  172 (224)
Q Consensus       134 ~~~~~~~al~~~~~--~~~~~l~VgDs~~Di~~A~~~G~~~  172 (224)
                      +.......++.+++  ++.+|++|||+.||+.....+|+..
T Consensus       182 K~~al~~l~~~~~~~~~~~~~i~~GD~~nD~~ml~~ag~~v  222 (225)
T TIGR02461       182 KGKAIKRLLDLYKLRPGAIESVGLGDSENDFPMFEVVDLAF  222 (225)
T ss_pred             HHHHHHHHHHHhccccCcccEEEEcCCHHHHHHHHhCCCcE
Confidence            45555666666654  7779999999999999999999864

Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles.

>PLN02382 probable sucrose-phosphatase

Probab=91.16  E-value=0.4  Score=44.80  Aligned_cols=49  Identities=14%  Similarity=0.158  Sum_probs=42.6

Q ss_pred             CCCHHHHHHHHHHh---CCCCCcEEEEeCChhcHHHHHHcCCeEEEECCCCC
Q 027403          132 KPSLEAIETAIRIA---NVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP  180 (224)
Q Consensus       132 KP~~~~~~~al~~~---~~~~~~~l~VgDs~~Di~~A~~~G~~~v~v~~~~~  180 (224)
                      --+..+...+++.+   |+++++++.+||+.||+..-..+|...|.+.++.+
T Consensus       174 ~sKg~Al~~L~~~~~~~gi~~~~~iafGDs~NDleMl~~ag~~gvam~NA~~  225 (413)
T PLN02382        174 AGKGQALAYLLKKLKAEGKAPVNTLVCGDSGNDAELFSVPDVYGVMVSNAQE  225 (413)
T ss_pred             CCHHHHHHHHHHHhhhcCCChhcEEEEeCCHHHHHHHhcCCCCEEEEcCCcH
Confidence            45788889999999   99999999999999999999999976788877643

>PF05152 DUF705: Protein of unknown function (DUF705); InterPro: IPR007827 This family contains uncharacterised baculoviral proteins

Probab=90.94  E-value=1  Score=40.23  Aligned_cols=103  Identities=22%  Similarity=0.246  Sum_probs=68.8

Q ss_pred             CCChhHHHHHhcCCC---CeEEEeCCChHHHHHHHHHcCCccccceeEeeccCCCCCCCCCCCC----Ccc-cccCCccc
Q 027403           56 KPDPVLRNLLLSMPQ---RKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTD----GIE-NNSFSSNQ  127 (224)
Q Consensus        56 ~~~~g~~~~L~~l~~---~~~I~Tn~~~~~~~~~l~~lgl~~~fd~ii~~~~~~~~~~~~~~~~----~~~-~~~~~~~~  127 (224)
                      .+.|.+.+.|..|+.   -+++=|-+.++++...++.+++.++||.|+|.+........+...|    .++ ...|+-..
T Consensus       142 Ir~~~v~~sL~~Lk~~g~vLvLWSyG~~eHV~~sl~~~~L~~~Fd~ii~~G~~~~~~~~~~~~d~~~~~~f~~~~FylDv  221 (297)
T PF05152_consen  142 IRDPAVYDSLRELKEQGCVLVLWSYGNREHVRHSLKELKLEGYFDIIICGGNKAGEYNSRVIVDRQYKVIFVSKPFYLDV  221 (297)
T ss_pred             cCChHHHHHHHHHHHcCCEEEEecCCCHHHHHHHHHHhCCccccEEEEeCCccCCcCCccceeecccceEEeccceEEeC
Confidence            367899999999983   3568899999999999999999999999999765443211121111    111 01111000


Q ss_pred             cc---cCCCCHHHHHHHHHHhCCC-CCcEEEEeCCh
Q 027403          128 RI---LCKPSLEAIETAIRIANVD-PKKTIFFDDSA  159 (224)
Q Consensus       128 ~~---~~KP~~~~~~~al~~~~~~-~~~~l~VgDs~  159 (224)
                      -.   ++| +|......+++.|+. .+.+-.|+|-.
T Consensus       222 ~~~~~LPK-SPrVVL~yL~k~gvny~KtiTLVDDL~  256 (297)
T PF05152_consen  222 TNVNNLPK-SPRVVLWYLRKKGVNYFKTITLVDDLK  256 (297)
T ss_pred             CcCCCCCC-CCeehHHHHHHcCCceeeeEEEeccCc
Confidence            00   122 578888899999986 46678888886

>PF05116 S6PP: Sucrose-6F-phosphate phosphohydrolase; InterPro: IPR006380 This family of sequences represent sucrose phosphate phosphohydrolase (SPP) from plants and cyanobacteria []

Probab=90.94  E-value=0.39  Score=41.51  Aligned_cols=48  Identities=19%  Similarity=0.293  Sum_probs=37.8

Q ss_pred             CCCCHHHHHHHHHHhCCCCCcEEEEeCChhcHHHHHHcCCeEEEECCCC
Q 027403          131 CKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSV  179 (224)
Q Consensus       131 ~KP~~~~~~~al~~~~~~~~~~l~VgDs~~Di~~A~~~G~~~v~v~~~~  179 (224)
                      +--+..+...+++++++++++++.+|||.||+..- ..+...|.|.+..
T Consensus       163 ~a~K~~Al~~L~~~~~~~~~~vl~aGDSgND~~mL-~~~~~~vvV~Na~  210 (247)
T PF05116_consen  163 GASKGAALRYLMERWGIPPEQVLVAGDSGNDLEML-EGGDHGVVVGNAQ  210 (247)
T ss_dssp             T-SHHHHHHHHHHHHT--GGGEEEEESSGGGHHHH-CCSSEEEE-TTS-
T ss_pred             CCCHHHHHHHHHHHhCCCHHHEEEEeCCCCcHHHH-cCcCCEEEEcCCC
Confidence            35578899999999999999999999999999766 7788889887754

SPP is a member of the Class IIB subfamily of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. SPP catalyzes the final step in the biosynthesis of sucrose, a critically important molecule for plants. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.; PDB: 1TJ5_A 2B1Q_A 1TJ4_A 1S2O_A 1U2T_A 2D2V_A 1TJ3_A 1U2S_A 2B1R_A 3GYG_B ....

>COG0474 MgtA Cation transport ATPase [Inorganic ion transport and metabolism]

Probab=90.27  E-value=0.95  Score=46.52  Aligned_cols=136  Identities=15%  Similarity=0.154  Sum_probs=79.2

Q ss_pred             CCChhHHHHHhcCC---CCeEEEeCCChHHHHHHHHHcCCccccc--eeEeeccCCCCCCCCCCCCCcccccCCcccccc
Q 027403           56 KPDPVLRNLLLSMP---QRKIIFTNADQKHAMEVLGRLGLEDCFE--GIICFETINPRLQPADNTDGIENNSFSSNQRIL  130 (224)
Q Consensus        56 ~~~~g~~~~L~~l~---~~~~I~Tn~~~~~~~~~l~~lgl~~~fd--~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  130 (224)
                      +|-++++++++.|+   .++.++|+-...-+..+-+.+|+..--+  -++++.+....... .-.+.+..-+      .-
T Consensus       547 ppr~~v~~aI~~l~~AGI~v~MiTGD~~~TA~aIa~~~Gi~~~~~~~~vi~G~el~~l~~~-el~~~~~~~~------Vf  619 (917)
T COG0474         547 PPREDVKEAIEELREAGIKVWMITGDHVETAIAIAKECGIEAEAESALVIDGAELDALSDE-ELAELVEELS------VF  619 (917)
T ss_pred             CCCccHHHHHHHHHHCCCcEEEECCCCHHHHHHHHHHcCCCCCCCceeEeehHHhhhcCHH-HHHHHhhhCc------EE
Confidence            57788999888886   7899999999999999999999864432  25555543321000 0000000000      11


Q ss_pred             CCCCHHHHHHHHHHhCCCCCcEEEEeCChhcHHHHHHcCCeEEEECCCCC--CCCCceE--eCCHhHHHHHH
Q 027403          131 CKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP--VPPADHA--LNSIHNIKEAI  198 (224)
Q Consensus       131 ~KP~~~~~~~al~~~~~~~~~~l~VgDs~~Di~~A~~~G~~~v~v~~~~~--~~~~d~~--i~~~~dl~~~i  198 (224)
                      +.=+|+-=..+.+.++-.-.-|.|+||+.||.-+-++|.+-......|.+  ..-+|.+  -+++.-+...+
T Consensus       620 ARvsP~qK~~IV~~lq~~g~vVamtGDGvNDapALk~ADVGIamg~~Gtdaak~Aadivl~dd~~~~i~~av  691 (917)
T COG0474         620 ARVSPEQKARIVEALQKSGHVVAMTGDGVNDAPALKAADVGIAMGGEGTDAAKEAADIVLLDDNFATIVLAV  691 (917)
T ss_pred             EEcCHHHHHHHHHHHHhCCCEEEEeCCCchhHHHHHhcCccEEecccHHHHHHhhcceEeecCcHHHHHHHH
Confidence            12233333333333333347799999999999999999886433334433  2335554  33455555444

>TIGR01494 ATPase_P-type ATPase, P-type (transporting), HAD superfamily, subfamily IC

Probab=90.22  E-value=1.8  Score=41.10  Aligned_cols=102  Identities=17%  Similarity=0.257  Sum_probs=66.5

Q ss_pred             CCChhHHHHHhcCC---CCeEEEeCCChHHHHHHHHHcCCccccceeEeeccCCCCCCCCCCCCCcccccCCccccccCC
Q 027403           56 KPDPVLRNLLLSMP---QRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCK  132 (224)
Q Consensus        56 ~~~~g~~~~L~~l~---~~~~I~Tn~~~~~~~~~l~~lgl~~~fd~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~K  132 (224)
                      ++.+++.+.++.|+   .+++++|+.+...+...-+.+|+   +     ++ .                          .
T Consensus       347 ~lr~~~~~~i~~l~~~gi~~~~ltGD~~~~a~~ia~~lgi---~-----~~-~--------------------------~  391 (499)
T TIGR01494       347 PLRDDAKETISELREAGIRVIMLTGDNVLTAKAIAKELGI---F-----AR-V--------------------------T  391 (499)
T ss_pred             CCchhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCc---e-----ec-c--------------------------C
Confidence            56677888777775   67889999999999999999886   1     11 1                          2


Q ss_pred             CCHHHHHHHHHHhCCCCCcEEEEeCChhcHHHHHHcCCeEEEECCCCCCCCCceEeCC--HhHHHHHH
Q 027403          133 PSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVPVPPADHALNS--IHNIKEAI  198 (224)
Q Consensus       133 P~~~~~~~al~~~~~~~~~~l~VgDs~~Di~~A~~~G~~~v~v~~~~~~~~~d~~i~~--~~dl~~~i  198 (224)
                      |.  --...++.+.-....+.||||+.||..+-+.++.- +.+.   ...-+|.++.+  +..+..++
T Consensus       392 p~--~K~~~v~~l~~~g~~v~~vGDg~nD~~al~~Advg-ia~~---a~~~adivl~~~~l~~i~~~~  453 (499)
T TIGR01494       392 PE--EKAALVEALQKKGRVVAMTGDGVNDAPALKKADVG-IAMG---AKAAADIVLLDDNLSTIVDAL  453 (499)
T ss_pred             HH--HHHHHHHHHHHCCCEEEEECCChhhHHHHHhCCCc-cccc---hHHhCCeEEecCCHHHHHHHH
Confidence            22  22234444433336799999999999888888754 3333   23347777654  44444433

The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily.

>COG5663 Uncharacterized conserved protein [Function unknown]

Probab=89.88  E-value=0.38  Score=39.82  Aligned_cols=135  Identities=19%  Similarity=0.242  Sum_probs=84.7

Q ss_pred             CCCHHHHHHHHhccC--CCCCCCCChhHHHHHhcCC--CCeEEEeCCChHHHHHHHHHcCCc-cccceeEeeccCCCCCC
Q 027403           36 EFDNDEFHAFVHGKL--PYEKLKPDPVLRNLLLSMP--QRKIIFTNADQKHAMEVLGRLGLE-DCFEGIICFETINPRLQ  110 (224)
Q Consensus        36 ~~~~~~~~~~~~~~~--~~~~~~~~~g~~~~L~~l~--~~~~I~Tn~~~~~~~~~l~~lgl~-~~fd~ii~~~~~~~~~~  110 (224)
                      .++-++|++++....  -+.....-.++...|..++  .+++-+|...+...+.--..+... -.+|.+--.+       
T Consensus        50 ~i~~ee~~k~~e~~ea~l~ke~l~~q~v~~~L~~~~e~~~L~~itar~~dl~~iT~~~l~~q~ih~~~l~i~g-------  122 (194)
T COG5663          50 NITTEEFWKWMEQTEAWLYKEALLAQLVKQVLPSLKEEHRLIYITARKADLTRITYAWLFIQNIHYDHLEIVG-------  122 (194)
T ss_pred             CccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhhceeeeeehhhHHHHHHHHHHHHHhccchhhhhhhc-------
Confidence            456677777655321  1122445567777888887  778888887766554443333222 2344422111       


Q ss_pred             CCCCCCCcccccCCccccccCCCCHHHHHHHHHHhCCCCCcEEEEeCCh-hcHHHHHHcCCeEEEECCCCCCCCC---ce
Q 027403          111 PADNTDGIENNSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSA-RNIASAKAAGLHTVIVGSSVPVPPA---DH  186 (224)
Q Consensus       111 ~~~~~~~~~~~~~~~~~~~~~KP~~~~~~~al~~~~~~~~~~l~VgDs~-~Di~~A~~~G~~~v~v~~~~~~~~~---d~  186 (224)
                                           +..+   -.+.+..+++    +|+.|+. +-.+.|+++|++.+.+.++..+.++   -.
T Consensus       123 ---------------------~h~K---V~~vrth~id----lf~ed~~~na~~iAk~~~~~vilins~ynRkp~~~nii  174 (194)
T COG5663         123 ---------------------LHHK---VEAVRTHNID----LFFEDSHDNAGQIAKNAGIPVILINSPYNRKPAAKNII  174 (194)
T ss_pred             ---------------------cccc---chhhHhhccC----ccccccCchHHHHHHhcCCcEEEecCcccccchHHHHH
Confidence                                 1111   2567778887    8999997 6788899999999999998765443   33


Q ss_pred             EeCCHhHHHHHHHHHHhhc
Q 027403          187 ALNSIHNIKEAIPEIWEGE  205 (224)
Q Consensus       187 ~i~~~~dl~~~i~~~~~~~  205 (224)
                      .+++..+..+.+...++.+
T Consensus       175 R~~~w~e~y~~vd~~~kR~  193 (194)
T COG5663         175 RANNWAEAYEWVDSRLKRS  193 (194)
T ss_pred             HHHhHHHHHHHHHHHhccC
Confidence            5677777777777666543

>TIGR01657 P-ATPase-V P-type ATPase of unknown pump specificity (type V)

Probab=89.74  E-value=3.3  Score=43.28  Aligned_cols=38  Identities=16%  Similarity=0.293  Sum_probs=32.7

Q ss_pred             CCChhHHHHHhcCC---CCeEEEeCCChHHHHHHHHHcCCc
Q 027403           56 KPDPVLRNLLLSMP---QRKIIFTNADQKHAMEVLGRLGLE   93 (224)
Q Consensus        56 ~~~~g~~~~L~~l~---~~~~I~Tn~~~~~~~~~l~~lgl~   93 (224)
                      ++.|++.+.++.|+   .+++++|+-+..-+..+-+.+|+-
T Consensus       656 ~lr~~~~~~I~~l~~agi~v~miTGD~~~TA~~iA~~~gii  696 (1054)
T TIGR01657       656 PLKPDTKEVIKELKRASIRTVMITGDNPLTAVHVARECGIV  696 (1054)
T ss_pred             CCCccHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCC
Confidence            46778888888886   788999999999899999999984

These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in.

>PF03767 Acid_phosphat_B: HAD superfamily, subfamily IIIB (Acid phosphatase); InterPro: IPR005519 This family of class B acid phosphatases also contains a number of vegetative storage proteins (VPS25)

Probab=88.91  E-value=0.16  Score=43.61  Aligned_cols=92  Identities=13%  Similarity=0.107  Sum_probs=55.9

Q ss_pred             CCCChhHHHHHhcCC---CCeEEEeCCCh---HHHHHHHHHcCCccccceeEeeccCCCCCCCCCCCCCcccccCCcccc
Q 027403           55 LKPDPVLRNLLLSMP---QRKIIFTNADQ---KHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQR  128 (224)
Q Consensus        55 ~~~~~g~~~~L~~l~---~~~~I~Tn~~~---~~~~~~l~~lgl~~~fd~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~  128 (224)
                      -++.|++.++++.+.   .+++++||++.   ......|...|+.. ++.++....-...            .       
T Consensus       114 ~~aip~a~~l~~~~~~~G~~V~~iT~R~~~~r~~T~~nL~~~G~~~-~~~l~lr~~~~~~------------~-------  173 (229)
T PF03767_consen  114 APAIPGALELYNYARSRGVKVFFITGRPESQREATEKNLKKAGFPG-WDHLILRPDKDPS------------K-------  173 (229)
T ss_dssp             GEEETTHHHHHHHHHHTTEEEEEEEEEETTCHHHHHHHHHHHTTST-BSCGEEEEESSTS------------S-------
T ss_pred             CcccHHHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHHcCCCc-cchhccccccccc------------c-------
Confidence            378888999998886   67889999764   57777888889653 3554433221110            0       


Q ss_pred             ccCCCCHHHHHHHHHHhCCCCCcEEEEeCChhcHHHHHHc
Q 027403          129 ILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAA  168 (224)
Q Consensus       129 ~~~KP~~~~~~~al~~~~~~~~~~l~VgDs~~Di~~A~~~  168 (224)
                      ......+..-...+++-|.  +=+++|||..+|+.+++..
T Consensus       174 ~~~~~yK~~~r~~i~~~Gy--~Ii~~iGD~~~D~~~~~~~  211 (229)
T PF03767_consen  174 KSAVEYKSERRKEIEKKGY--RIIANIGDQLSDFSGAKTA  211 (229)
T ss_dssp             ------SHHHHHHHHHTTE--EEEEEEESSGGGCHCTHHH
T ss_pred             ccccccchHHHHHHHHcCC--cEEEEeCCCHHHhhccccc
Confidence            0012223333344444442  2289999999999995444

The acid phosphatase activity of VPS has been experimentally demonstrated [].; GO: 0003993 acid phosphatase activity; PDB: 3PCT_C 2I34_A 2I33_A 1Z5U_D 1Z5G_A 2AUT_C 1Z88_B 3OCV_A 3OCZ_A 3OCX_A ....

>TIGR02245 HAD_IIID1 HAD-superfamily subfamily IIID hydrolase, TIGR02245

Probab=88.71  E-value=1.5  Score=36.91  Aligned_cols=39  Identities=21%  Similarity=0.192  Sum_probs=34.6

Q ss_pred             CCCChhHHHHHhcCC--CCeEEEeCCChHHHHHHHHHcCCc
Q 027403           55 LKPDPVLRNLLLSMP--QRKIIFTNADQKHAMEVLGRLGLE   93 (224)
Q Consensus        55 ~~~~~g~~~~L~~l~--~~~~I~Tn~~~~~~~~~l~~lgl~   93 (224)
                      ...-|++.++|+.+.  +.++|.|.+...++..+++.+|+.
T Consensus        44 ~~kRP~l~eFL~~~~~~feIvVwTAa~~~ya~~~l~~l~~~   84 (195)
T TIGR02245        44 ELMRPYLHEFLTSAYEDYDIVIWSATSMKWIEIKMTELGVL   84 (195)
T ss_pred             EEeCCCHHHHHHHHHhCCEEEEEecCCHHHHHHHHHHhccc
Confidence            346689999999996  899999999999999999998864

This family of sequences appears to belong to the Haloacid Dehalogenase (HAD) superfamily of enzymes by virtue of the presence of three catalytic domains, in this case: LLVLD(ILV)D(YH)T, I(VMG)IWS, and (DN)(VC)K(PA)Lx{15-17}T(IL)(MH)(FV)DD(IL)(GRS)(RK)N. Since this family has no large "cap" domain between motifs 1 and 2 or between 2 and 3, it is formally a "class III" HAD.

>TIGR01652 ATPase-Plipid phospholipid-translocating P-type ATPase, flippase

Probab=87.53  E-value=1.4  Score=46.02  Aligned_cols=49  Identities=18%  Similarity=0.274  Sum_probs=36.7

Q ss_pred             CCcEEEEeCChhcHHHHHHcCCeEEEECCCC--C-CCCCceEeCCHhHHHHHH
Q 027403          149 PKKTIFFDDSARNIASAKAAGLHTVIVGSSV--P-VPPADHALNSIHNIKEAI  198 (224)
Q Consensus       149 ~~~~l~VgDs~~Di~~A~~~G~~~v~v~~~~--~-~~~~d~~i~~~~dl~~~i  198 (224)
                      ..-|+++||+.||+.+-++|.+- |++....  . ..-+|+++.++..|..++
T Consensus       768 ~~~vl~iGDG~ND~~mlk~AdVG-Igi~g~eg~qA~~aaD~~i~~F~~L~~ll  819 (1057)
T TIGR01652       768 GKTTLAIGDGANDVSMIQEADVG-VGISGKEGMQAVMASDFAIGQFRFLTKLL  819 (1057)
T ss_pred             CCeEEEEeCCCccHHHHhhcCee-eEecChHHHHHHHhhhhhhhhHHHHHHHH
Confidence            36799999999999999988775 3543221  1 334899999988888776

This model describes the P-type ATPase responsible for transporting phospholipids from one leaflet of bilayer membranes to the other. These ATPases are found only in eukaryotes.

>smart00775 LNS2 LNS2 domain

Probab=87.29  E-value=5.7  Score=31.91  Aligned_cols=102  Identities=13%  Similarity=0.108  Sum_probs=58.2

Q ss_pred             CCChhHHHHHhcCC---CCeEEEeCCChHHH---HHHHHHc---CCcccc-ceeEeeccCCCCCCCCCCCCCcccccCCc
Q 027403           56 KPDPVLRNLLLSMP---QRKIIFTNADQKHA---MEVLGRL---GLEDCF-EGIICFETINPRLQPADNTDGIENNSFSS  125 (224)
Q Consensus        56 ~~~~g~~~~L~~l~---~~~~I~Tn~~~~~~---~~~l~~l---gl~~~f-d~ii~~~~~~~~~~~~~~~~~~~~~~~~~  125 (224)
                      ...|++.+++++++   ++++++|+++...+   +..++.+   |. +.. ..++++......       +       ..
T Consensus        27 ~~~~~~~~a~~~l~~~G~~ivy~TGRp~~~~~~t~~~l~~~~~~~~-~lp~g~li~~~g~~~~-------~-------~~   91 (157)
T smart00775       27 WTHPGVAKLYRDIQNNGYKILYLTARPIGQADRTRSYLSQIKQDGH-NLPHGPVLLSPDRLFA-------A-------LH   91 (157)
T ss_pred             cCCHHHHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHHHHHhhhccc-cCCCceEEEcCCcchh-------h-------hh
Confidence            45789999999886   78889999998766   4666662   32 122 345655432110       0       00


Q ss_pred             cccccCCC---CHHHHHHHHHHhCCCCCcE-EEEeCChhcHHHHHHcCCeE
Q 027403          126 NQRILCKP---SLEAIETAIRIANVDPKKT-IFFDDSARNIASAKAAGLHT  172 (224)
Q Consensus       126 ~~~~~~KP---~~~~~~~al~~~~~~~~~~-l~VgDs~~Di~~A~~~G~~~  172 (224)
                      +.....+|   +.+....+.+.+.-..-.. .-+||+..|+.+=.++|++.
T Consensus        92 ~e~i~~~~~~~K~~~l~~i~~~~~~~~~~f~~~~gn~~~D~~~y~~~gi~~  142 (157)
T smart00775       92 REVISKKPEVFKIACLRDIKSLFPPQGNPFYAGFGNRITDVISYSAVGIPP  142 (157)
T ss_pred             cccccCCHHHHHHHHHHHHHHhcCCCCCCEEEEeCCCchhHHHHHHcCCCh
Confidence            01111244   3333444443333111223 34778899999999999965

This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins. SMP2 is involved in plasmid maintenance and respiration. Lipin proteins are involved in adipose tissue development and insulin resistance.

>PLN03017 trehalose-phosphatase

Probab=86.21  E-value=4.1  Score=37.62  Aligned_cols=72  Identities=13%  Similarity=0.114  Sum_probs=52.1

Q ss_pred             CHHHHHHHHHHhCCC---CCcEEEEeCChhcHHHHHHc---C-CeEEEECCCCCCCCCceEeCCHhHHHHHHHHHHhhc
Q 027403          134 SLEAIETAIRIANVD---PKKTIFFDDSARNIASAKAA---G-LHTVIVGSSVPVPPADHALNSIHNIKEAIPEIWEGE  205 (224)
Q Consensus       134 ~~~~~~~al~~~~~~---~~~~l~VgDs~~Di~~A~~~---G-~~~v~v~~~~~~~~~d~~i~~~~dl~~~i~~~~~~~  205 (224)
                      +-.+.+.+++.++..   ..-.+|+||...|-.+-+..   | -..|.|+.......+.|.+++..++.++|..+.+-.
T Consensus       284 KG~Av~~LL~~l~~~~~~~~~pvyiGDD~TDEDaF~~L~~~~~G~gI~VG~~~k~T~A~y~L~dp~eV~~fL~~L~~~~  362 (366)
T PLN03017        284 KGKALEFLLESLGFGNTNNVFPVYIGDDRTDEDAFKMLRDRGEGFGILVSKFPKDTDASYSLQDPSEVMDFLARLVEWK  362 (366)
T ss_pred             HHHHHHHHHHhcccccCCCceEEEeCCCCccHHHHHHHhhcCCceEEEECCCCCCCcceEeCCCHHHHHHHHHHHHHHH
Confidence            356667777777754   23589999999875554433   2 346778754446779999999999999998886653

>PLN02151 trehalose-phosphatase

Probab=85.17  E-value=3.9  Score=37.61  Aligned_cols=69  Identities=17%  Similarity=0.183  Sum_probs=48.6

Q ss_pred             CHHHHHHHHHHhCCCCC---cEEEEeCChhcHHHHHHc-----CCeEEEECCCCCCCCCceEeCCHhHHHHHHHHHHh
Q 027403          134 SLEAIETAIRIANVDPK---KTIFFDDSARNIASAKAA-----GLHTVIVGSSVPVPPADHALNSIHNIKEAIPEIWE  203 (224)
Q Consensus       134 ~~~~~~~al~~~~~~~~---~~l~VgDs~~Di~~A~~~-----G~~~v~v~~~~~~~~~d~~i~~~~dl~~~i~~~~~  203 (224)
                      +-.+...+++.++..-.   -++|+||-..|-.+-+..     |+ .|.|..+.....+.|.+++..++.+++..+.+
T Consensus       270 KG~Av~~Ll~~~~~~~~~~~~pvyiGDD~TDEDaF~~L~~~~~G~-gI~Vg~~~k~T~A~y~L~dp~eV~~~L~~L~~  346 (354)
T PLN02151        270 KGKALEFLLESLGYANCTDVFPIYIGDDRTDEDAFKILRDKKQGL-GILVSKYAKETNASYSLQEPDEVMEFLERLVE  346 (354)
T ss_pred             HHHHHHHHHHhcccccCCCCeEEEEcCCCcHHHHHHHHhhcCCCc-cEEeccCCCCCcceEeCCCHHHHHHHHHHHHH
Confidence            35566777777665422   389999999775554432     43 46676544567799999999999999987754

>KOG0202 consensus Ca2+ transporting ATPase [Inorganic ion transport and metabolism]

Probab=85.01  E-value=2.7  Score=42.70  Aligned_cols=133  Identities=14%  Similarity=0.200  Sum_probs=80.3

Q ss_pred             CCChhHHHHHhcCC---CCeEEEeCCChHHHHHHHHHcCCccccce----eEeeccCCCCCCCCCCCCCcccc---cCCc
Q 027403           56 KPDPVLRNLLLSMP---QRKIIFTNADQKHAMEVLGRLGLEDCFEG----IICFETINPRLQPADNTDGIENN---SFSS  125 (224)
Q Consensus        56 ~~~~g~~~~L~~l~---~~~~I~Tn~~~~~~~~~l~~lgl~~~fd~----ii~~~~~~~~~~~~~~~~~~~~~---~~~~  125 (224)
                      +|.+++++.++.+.   .++.++|+-...-+.....+.|+.+.=+.    ..++...          |...++   ....
T Consensus       584 PPR~ev~~ai~~c~~aGIrV~mITGD~~~TA~AI~r~iGi~~~~ed~~~~~~TG~ef----------D~ls~~~~~~~~~  653 (972)
T KOG0202|consen  584 PPRPEVADAIELCRQAGIRVIMITGDNKETAEAIAREIGIFSEDEDVSSMALTGSEF----------DDLSDEELDDAVR  653 (972)
T ss_pred             CCchhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHhCCCcCCccccccccchhhh----------hcCCHHHHHHHhh
Confidence            57788988888886   78889999999999999999998655443    2222211          111111   0111


Q ss_pred             cccccCCCCHHHHHHHHHHhCCCCCcEEEEeCChhcHHHHHHcCCeEEEEC-CCCC--CCCCceEe--CCHhHHHHHHH
Q 027403          126 NQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVG-SSVP--VPPADHAL--NSIHNIKEAIP  199 (224)
Q Consensus       126 ~~~~~~KP~~~~~~~al~~~~~~~~~~l~VgDs~~Di~~A~~~G~~~v~v~-~~~~--~~~~d~~i--~~~~dl~~~i~  199 (224)
                      +...-..-.|..=..+.+.++-..+=|.|-||++||--+-+.+.+- |.++ +|..  ..-+|.++  +||..+...+.
T Consensus       654 ~~~vFaR~~P~HK~kIVeaLq~~geivAMTGDGVNDApALK~AdIG-IAMG~~GTdVaKeAsDMVL~DDnFstIvaAVE  731 (972)
T KOG0202|consen  654 RVLVFARAEPQHKLKIVEALQSRGEVVAMTGDGVNDAPALKKADIG-IAMGISGTDVAKEASDMVLADDNFSTIVAAVE  731 (972)
T ss_pred             cceEEEecCchhHHHHHHHHHhcCCEEEecCCCccchhhhhhcccc-eeecCCccHhhHhhhhcEEecCcHHHHHHHHH
Confidence            1111112234444445555554557799999999999998888764 4444 3322  33356654  44666655554

>KOG2469 consensus IMP-GMP specific 5'-nucleotidase [Nucleotide transport and metabolism]

Probab=82.69  E-value=4.5  Score=37.79  Aligned_cols=117  Identities=15%  Similarity=0.083  Sum_probs=72.6

Q ss_pred             HHHHhcCCCCeEEEeCCChHHHHHHHHHc---CCccccceeEeeccCCCCCCCC-----CCCCCcc--cccCCccccccC
Q 027403           62 RNLLLSMPQRKIIFTNADQKHAMEVLGRL---GLEDCFEGIICFETINPRLQPA-----DNTDGIE--NNSFSSNQRILC  131 (224)
Q Consensus        62 ~~~L~~l~~~~~I~Tn~~~~~~~~~l~~l---gl~~~fd~ii~~~~~~~~~~~~-----~~~~~~~--~~~~~~~~~~~~  131 (224)
                      ...++....+..+.||+..........++   +...+||-+++...-+....-.     -+++.+.  ..--.+-..-.+
T Consensus       207 l~~~r~sGKk~fl~Tns~~~ytd~~mt~~~~~dW~~yfd~v~~~a~Kp~ff~e~~vlreV~t~~g~l~~g~~~~p~e~~~  286 (424)
T KOG2469|consen  207 LSMLRDSGKKTFLHTNSDWDYTDIFMAFHYGFDWETYFDLVETRAAKPGFFHEGTVLREVEPQEGLLKNGDNTGPLEQGG  286 (424)
T ss_pred             hHHHHhhccceEEeeccccchhhHHHHHHhCCCcceeEEEEEEeccCCccccccceeeeeccccccccccccCCcchhcc
Confidence            33444445788999999987766665542   3456788776653222111100     1111111  000011122234


Q ss_pred             CCCHHHHHHHHHHhCCCCCcEEEEeCChh-c-HHHHHHcCCeEEEECCC
Q 027403          132 KPSLEAIETAIRIANVDPKKTIFFDDSAR-N-IASAKAAGLHTVIVGSS  178 (224)
Q Consensus       132 KP~~~~~~~al~~~~~~~~~~l~VgDs~~-D-i~~A~~~G~~~v~v~~~  178 (224)
                      +++...-+.+...+++...+++++||+.. | +.+-+..|++++.|...
T Consensus       287 ~ySggs~~~~~~~l~~~g~diLy~gdHi~~dvl~skk~~~wrt~lv~pe  335 (424)
T KOG2469|consen  287 VYSGGSLKTVETSMKVKGKDILYGGDHIWGDVLVSKKRRGWRTVLVAPE  335 (424)
T ss_pred             cCCcchHHHHHHHhcccccceeecccceeeeEEecceecceEEEEEehh
Confidence            77889999999999999999999999985 6 45667789999988654

>COG4030 Uncharacterized protein conserved in archaea [Function unknown]

Probab=81.81  E-value=16  Score=32.00  Aligned_cols=39  Identities=8%  Similarity=0.132  Sum_probs=34.2

Q ss_pred             CCCCChhHHHHHhcCC--CCeEEEeCCChHHHHHHHHHcCC
Q 027403           54 KLKPDPVLRNLLLSMP--QRKIIFTNADQKHAMEVLGRLGL   92 (224)
Q Consensus        54 ~~~~~~g~~~~L~~l~--~~~~I~Tn~~~~~~~~~l~~lgl   92 (224)
                      ..++.||+.+.++.+.  ..-+|+|-+-..+++....++|+
T Consensus        81 sa~lvPgA~etm~~l~~~~tp~v~STSY~qy~~r~a~~ig~  121 (315)
T COG4030          81 SAKLVPGAEETMATLQERWTPVVISTSYTQYLRRTASMIGV  121 (315)
T ss_pred             hcccCCChHHHHHHHhccCCceEEeccHHHHHHHHHHhcCC
Confidence            4678899999999998  57789998888999999999987

>PRK10444 UMP phosphatase; Provisional

Probab=81.76  E-value=2  Score=37.17  Aligned_cols=49  Identities=10%  Similarity=0.030  Sum_probs=36.5

Q ss_pred             CCChhHHHHHhcCC---CCeEEEeCCCh---HHHHHHHHHcCCccccceeEeecc
Q 027403           56 KPDPVLRNLLLSMP---QRKIIFTNADQ---KHAMEVLGRLGLEDCFEGIICFET  104 (224)
Q Consensus        56 ~~~~g~~~~L~~l~---~~~~I~Tn~~~---~~~~~~l~~lgl~~~fd~ii~~~~  104 (224)
                      .+.|++.++|++|+   .+++++||++.   ..+...|..+|+.---+.|+++..
T Consensus        17 ~~~p~a~~~l~~L~~~g~~~~~~Tn~~~~~~~~~~~~l~~~G~~~~~~~i~ts~~   71 (248)
T PRK10444         17 VAVPGAAEFLHRILDKGLPLVLLTNYPSQTGQDLANRFATAGVDVPDSVFYTSAM   71 (248)
T ss_pred             eeCccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCCCHhhEecHHH
Confidence            67899999998886   67889999876   456666777887533456777643

>TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458

Probab=81.15  E-value=1.3  Score=38.36  Aligned_cols=49  Identities=16%  Similarity=0.208  Sum_probs=38.3

Q ss_pred             CChhHHHHHhcCC---CCeEEEeCCCh---HHHHHHHHHcCCccccceeEeeccC
Q 027403           57 PDPVLRNLLLSMP---QRKIIFTNADQ---KHAMEVLGRLGLEDCFEGIICFETI  105 (224)
Q Consensus        57 ~~~g~~~~L~~l~---~~~~I~Tn~~~---~~~~~~l~~lgl~~~fd~ii~~~~~  105 (224)
                      +.|++.++|+.|+   .+++++||++.   ..+...++.+|+.--.+.|+++...
T Consensus        22 ~~~~a~~al~~l~~~G~~~~~~Tn~~~~~~~~~~~~l~~~g~~~~~~~i~ts~~~   76 (257)
T TIGR01458        22 AVPGSQEAVKRLRGASVKVRFVTNTTKESKQDLLERLQRLGFDISEDEVFTPAPA   76 (257)
T ss_pred             cCCCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHHcCCCCCHHHeEcHHHH
Confidence            7899999999986   67889999765   3577788889986445678887543

This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published.

>KOG1618 consensus Predicted phosphatase [General function prediction only]

Probab=80.78  E-value=1.2  Score=40.53  Aligned_cols=50  Identities=22%  Similarity=0.302  Sum_probs=40.0

Q ss_pred             cCCCCHHHHHHHHHHh-------C--CCCCcEEEEeCCh-hcHHHHH---------------HcCCeEEEECCCC
Q 027403          130 LCKPSLEAIETAIRIA-------N--VDPKKTIFFDDSA-RNIASAK---------------AAGLHTVIVGSSV  179 (224)
Q Consensus       130 ~~KP~~~~~~~al~~~-------~--~~~~~~l~VgDs~-~Di~~A~---------------~~G~~~v~v~~~~  179 (224)
                      .|||.+-.|+.|...+       +  -+++.+.+|||.+ .|+.+|+               +-||.+|.|.+|.
T Consensus       269 ~GKPt~ltY~~A~~vl~~~ak~~~~~~~~k~lymvGDNP~sDv~GA~lf~~yap~~~~g~~~~~~w~SILV~TGV  343 (389)
T KOG1618|consen  269 LGKPTKLTYDYAEDVLRRQAKRRGGAAPIKKLYMVGDNPMSDVRGANLFHQYAPELGAGGSANYGWISILVRTGV  343 (389)
T ss_pred             cCCCceehHHhHHHHHHHHHHhhcccCCcceeeeecCCCcccccccccccccccccccccccCCCceEEEEeeee
Confidence            4699999998765433       1  2578899999998 5999997               7899999998874

>PF05822 UMPH-1: Pyrimidine 5'-nucleotidase (UMPH-1); InterPro: IPR006434 This family is a small group of metazoan sequences with sequences from Arabidopsis thaliana (Mouse-ear cress) and rice

Probab=80.62  E-value=2.5  Score=36.90  Aligned_cols=54  Identities=15%  Similarity=0.173  Sum_probs=38.0

Q ss_pred             CCCCHHHHHHHHhccCCCCCCCCChhHHHHHhcCC---CCeEEEeCCChHHHHHHHHHcCC
Q 027403           35 YEFDNDEFHAFVHGKLPYEKLKPDPVLRNLLLSMP---QRKIIFTNADQKHAMEVLGRLGL   92 (224)
Q Consensus        35 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~L~~l~---~~~~I~Tn~~~~~~~~~l~~lgl   92 (224)
                      .+++..++...+.+    ..+.+.+|+.++++.|.   .++.|+|.+-.+-+..++++.|.
T Consensus        73 ~~l~k~~i~~~V~~----s~i~LRdg~~~~f~~L~~~~IP~lIFSAGlgdvI~~vL~q~~~  129 (246)
T PF05822_consen   73 QGLTKSEIEEAVKE----SDIMLRDGVEEFFDKLEEHNIPLLIFSAGLGDVIEEVLRQAGV  129 (246)
T ss_dssp             HT-BGGGHHHHHHC----S---B-BTHHHHHHHHHCTT--EEEEEEEEHHHHHHHHHHTT-
T ss_pred             cCcCHHHHHHHHHh----cchhhhcCHHHHHHHHHhcCCCEEEEeCCcHHHHHHHHHHcCC
Confidence            44566666666664    56788899999998886   68889999999999999999865

The sequences represent pyrimidine 5-nucleotidases, apparently in reference to HSPC233, the Homo sapiens (Human) homologue []. The structure of mouse sequence has been reported []. This group of sequences was originally found during searches for members of the haloacid dehalogenase (HAD) superfamily (IPR005834 from INTERPRO). All of the conserved catalytic motifs [] are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches of that subfamily (IA-ID) as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.; GO: 0000287 magnesium ion binding, 0008253 5'-nucleotidase activity, 0005737 cytoplasm; PDB: 2BDU_B 2G07_A 2G06_A 2G0A_A 2Q4T_A 2G09_A 2G08_A 2VKQ_A 2CN1_A 2JGA_A.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	224
3opx_A	263	Crystal Structure Of Pyrimidine 5 -Nucleotidase Sdt		2e-12
3nuq_A	282	Structure Of A Putative Nucleotide Phosphatase From		2e-12
3onn_A	263	Crystal Structure Of 5'-Nucleotidase Sdt1 From Sacc		2e-12

>pdb|3OPX|A Chain A, Crystal Structure Of Pyrimidine 5 -Nucleotidase Sdt1 From Saccharomyces Cerevisiae Complexed With Uridine 5'-Monophosphate Length = 263

Iteration: 1
 Score = 69.3 bits (168), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 48/162 (29%), Positives = 80/162 (49%), Gaps = 27/162 (16%)
Query: 20  YREHGTTMAGLKAVGYEFDNDEFHAFVHGKLPYEK-LKPDPVLRNLLLSMPQ-----RKI 73
           Y+E+G  + GL  + ++ +  E++  V   LP +  LKPD  LRN+LL + Q     +  
Sbjct: 79  YKEYGLAIRGL-VMFHKVNALEYNRLVDDSLPLQDILKPDIPLRNMLLRLRQSGKIDKLW 137
Query: 74  IFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCKP 133
           +FTNA + HA+  L  LG+ D F                   DG+    +S    ++CKP
Sbjct: 138 LFTNAYKNHAIRCLRLLGIADLF-------------------DGLTYCDYSRTDTLVCKP 178
Query: 134 SLEAIETAIRIANVDPKKTIFF-DDSARNIASAKAAGLHTVI 174
            ++A E A++ + +   +  +F DDS +NI +    G+ T I
Sbjct: 179 HVKAFEKAMKESGLARYENAYFIDDSGKNIETGIKLGMKTCI 220

>pdb|3NUQ|A Chain A, Structure Of A Putative Nucleotide Phosphatase From Saccharomyces Cerevisiae Length = 282

Iteration: 1
 Score = 69.3 bits (168), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 50/178 (28%), Positives = 85/178 (47%), Gaps = 27/178 (15%)
Query: 4   HLHIDESEVPRMCLELYREHGTTMAGLKAVGYEFDNDEFHAFVHGKLPYEK-LKPDPVLR 62
           HL +   +   +    Y+E+G  + GL  + ++ +  E++  V   LP +  LKPD  LR
Sbjct: 90  HLKLSPEDAHVLNNSYYKEYGLAIRGL-VMFHKVNALEYNRLVDDSLPLQDILKPDIPLR 148
Query: 63  NLLLSMPQ-----RKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDG 117
           N+LL + Q     +  +FTNA + HA+  L  LG+ D F                   DG
Sbjct: 149 NMLLRLRQSGKIDKLWLFTNAYKNHAIRCLRLLGIADLF-------------------DG 189
Query: 118 IENNSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFF-DDSARNIASAKAAGLHTVI 174
           +    +S    ++CKP ++A E A++ + +   +  +F DDS +NI +    G+ T I
Sbjct: 190 LTYCDYSRTDTLVCKPHVKAFEKAMKESGLARYENAYFIDDSGKNIETGIKLGMKTCI 247

>pdb|3ONN|A Chain A, Crystal Structure Of 5'-Nucleotidase Sdt1 From Saccharomyces Cerevisiae Length = 263

Iteration: 1
 Score = 68.9 bits (167), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 48/162 (29%), Positives = 80/162 (49%), Gaps = 27/162 (16%)
Query: 20  YREHGTTMAGLKAVGYEFDNDEFHAFVHGKLPYEK-LKPDPVLRNLLLSMPQ-----RKI 73
           Y+E+G  + GL  + ++ +  E++  V   LP +  LKPD  LRN+LL + Q     +  
Sbjct: 79  YKEYGLAIRGL-VMFHKVNALEYNRLVDDSLPLQDILKPDIPLRNMLLRLRQSGKIDKLW 137
Query: 74  IFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCKP 133
           +FTNA + HA+  L  LG+ D F                   DG+    +S    ++CKP
Sbjct: 138 LFTNAYKNHAIRCLRLLGIADLF-------------------DGLTYCDYSRTDTLVCKP 178
Query: 134 SLEAIETAIRIANVDPKKTIFF-DDSARNIASAKAAGLHTVI 174
            ++A E A++ + +   +  +F DDS +NI +    G+ T I
Sbjct: 179 HVKAFEKAMKESGLARYENAYFIDDSGKNIETGIKLGMKTCI 220

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	224
3nuq_A	282	Protein SSM1, putative nucleotide phosphatase; sup	4e-34
3cnh_A	200	Hydrolase family protein; NP_295428.1, predicted h	1e-12
2pr7_A	137	Haloacid dehalogenase/epoxide hydrolase family; NP	8e-12
3s6j_A	233	Hydrolase, haloacid dehalogenase-like family; stru	2e-11
2hoq_A	241	Putative HAD-hydrolase PH1655; haloacid dehalogena	3e-11
2wf7_A	221	Beta-PGM, beta-phosphoglucomutase; transition stat	1e-10
2i6x_A	211	Hydrolase, haloacid dehalogenase-like family; HAD	1e-10
3u26_A	234	PF00702 domain protein; structural genomics, PSI-b	2e-10
4dcc_A	229	Putative haloacid dehalogenase-like hydrolase; mag	4e-10
3kzx_A	231	HAD-superfamily hydrolase, subfamily IA, variant;	6e-10
2b0c_A	206	Putative phosphatase; alpha-D-glucose-1-phosphate,	1e-09
2pke_A	251	Haloacid delahogenase-like family hydrolase; NP_63	1e-09
2hsz_A	243	Novel predicted phosphatase; structural genomics,	3e-09
2fdr_A	229	Conserved hypothetical protein; SAD, structural ge	4e-09
3nas_A	233	Beta-PGM, beta-phosphoglucomutase; PSI, structural	7e-09
3ed5_A	238	YFNB; APC60080, bacillus subtilis subsp. subtilis	1e-08
2hdo_A	209	Phosphoglycolate phosphatase; NP_784602.1, structu	1e-08
2nyv_A	222	Pgpase, PGP, phosphoglycolate phosphatase; structu	1e-08
3d6j_A	225	Putative haloacid dehalogenase-like hydrolase; str	1e-08
2om6_A	235	Probable phosphoserine phosphatase; rossmann fold,	2e-08
3mc1_A	226	Predicted phosphatase, HAD family; PSI2, NYSGXRC,	9e-08
3ib6_A	189	Uncharacterized protein; structural genomics, unkn	1e-07
3k1z_A	263	Haloacid dehalogenase-like hydrolase domain-conta	1e-07
3e58_A	214	Putative beta-phosphoglucomutase; structu genomics	2e-07
2hi0_A	240	Putative phosphoglycolate phosphatase; YP_619066.1	2e-07
1qq5_A	253	Protein (L-2-haloacid dehalogenase); hydrolase; 1.	2e-07
2go7_A	207	Hydrolase, haloacid dehalogenase-like family; stru	2e-07
3qnm_A	240	Haloacid dehalogenase-like hydrolase; structural g	2e-07
2gfh_A	260	Haloacid dehalogenase-like hydrolase domain conta;	3e-07
4g9b_A	243	Beta-PGM, beta-phosphoglucomutase; HAD, putative p	3e-07
2pib_A	216	Phosphorylated carbohydrates phosphatase TM_1254;	3e-07
1qyi_A	384	ZR25, hypothetical protein; structural genomics, P	4e-07
1te2_A	226	Putative phosphatase; structural genomics, phospha	5e-07
2no4_A	240	(S)-2-haloacid dehalogenase IVA; HAD superfamily,	1e-06
2fi1_A	190	Hydrolase, haloacid dehalogenase-like family; stru	1e-06
1zrn_A	232	L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseud	2e-06
3ddh_A	234	Putative haloacid dehalogenase-like family hydrol;	2e-06
2wm8_A	187	MDP-1, magnesium-dependent phosphatase 1; haloacid	3e-06
4eek_A	259	Beta-phosphoglucomutase-related protein; hydrolase	5e-06
2qlt_A	275	(DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, sac	6e-06
2zg6_A	220	Putative uncharacterized protein ST2620, probable	6e-06
3m9l_A	205	Hydrolase, haloacid dehalogenase-like family; HAD	1e-05
3qxg_A	243	Inorganic pyrophosphatase; hydrolase, magnesium bi	1e-05
3sd7_A	240	Putative phosphatase; structural genomics, haloaci	3e-05
1yns_A	261	E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo	3e-05
2ah5_A	210	COG0546: predicted phosphatases; MCSG, structural	8e-05
2g80_A	253	Protein UTR4; YEL038W, UTR4 protein (unknown trans	1e-04
3iru_A	277	Phoshonoacetaldehyde hydrolase like protein; phosp	1e-04
1swv_A	267	Phosphonoacetaldehyde hydrolase; HAD enzyme superf	2e-04
3dv9_A	247	Beta-phosphoglucomutase; structural genomics, APC6	2e-04
2hcf_A	234	Hydrolase, haloacid dehalogenase-like family; NP_6	3e-04
3l5k_A	250	Protein GS1, haloacid dehalogenase-like hydrolase	3e-04

>3nuq_A Protein SSM1, putative nucleotide phosphatase; suppresses the 6-AU sensitivity of transcription elongation II; 1.70A {Saccharomyces cerevisiae} PDB: 3onn_A 3opx_A* Length = 282

 Score =  122 bits (306), Expect = 4e-34
 Identities = 50/216 (23%), Positives = 92/216 (42%), Gaps = 34/216 (15%)

Query: 1   MSQHLHIDESEVPRMCLELYREHGTTMAGLKAVGYEFDNDEFHAFVHGKLPYE-KLKPDP 59
              HL +   +   +    Y+E+G  + G   + ++ +  E++  V   LP +  LKPD 
Sbjct: 87  FQTHLKLSPEDAHVLNNSYYKEYGLAIRG-LVMFHKVNALEYNRLVDDSLPLQDILKPDI 145

Query: 60  VLRNLLLSMPQ-----RKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADN 114
            LRN+LL + Q     +  +FTNA + HA+  L  LG+ D F+G+   +           
Sbjct: 146 PLRNMLLRLRQSGKIDKLWLFTNAYKNHAIRCLRLLGIADLFDGLTYCDYSRTD------ 199

Query: 115 TDGIENNSFSSNQRILCKPSLEAIETAIRIANVDPKKT-IFFDDSARNIASAKAAGLHTV 173
                         ++CKP ++A E A++ + +   +   F DDS +NI +    G+ T 
Sbjct: 200 -------------TLVCKPHVKAFEKAMKESGLARYENAYFIDDSGKNIETGIKLGMKTC 246

Query: 174 IVGSSVPV-------PPADHALNSIHNIKEAIPEIW 202
           I      V       P     ++ I  +   + +++
Sbjct: 247 IHLVENEVNEILGQTPEGAIVISDILELPHVVSDLF 282

>3cnh_A Hydrolase family protein; NP_295428.1, predicted hydrolase of haloacid dehalogenase-LI superfamily; HET: MSE PG4; 1.66A {Deinococcus radiodurans R1} Length = 200

 Score = 63.1 bits (154), Expect = 1e-12
 Identities = 26/146 (17%), Positives = 53/146 (36%), Gaps = 30/146 (20%)

Query: 30  LKAVGYEFDNDEFHAFVHGKLPYEKLKPDPVLRNLLLSMPQR-KI-IFTNADQKHAMEVL 87
           +     +F  ++F A +      E+ +P P +  L   + QR ++    N  +      +
Sbjct: 65  VFYQPRDFTPEDFRAVME-----EQSQPRPEVLALARDLGQRYRMYSLNNEGRDLNEYRI 119

Query: 88  GRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCKPSLEAIETAIRIANV 147
              GL +                              S+   + KP+       + +A V
Sbjct: 120 RTFGLGEFLLAFFT-----------------------SSALGVMKPNPAMYRLGLTLAQV 156

Query: 148 DPKKTIFFDDSARNIASAKAAGLHTV 173
            P++ +  DD  +N+ +A+A G+H V
Sbjct: 157 RPEEAVMVDDRLQNVQAARAVGMHAV 182

>2pr7_A Haloacid dehalogenase/epoxide hydrolase family; NP_599989.1, uncharacterized protein, structural genomics; 1.44A {Corynebacterium glutamicum atcc 13032} Length = 137

 Score = 59.7 bits (145), Expect = 8e-12
 Identities = 22/136 (16%), Positives = 39/136 (28%), Gaps = 26/136 (19%)

Query: 56  KPDPVLRNLLLSMPQRKI---IFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPA 112
           +     RNLL +  +  +   I +N         +  L      + ++            
Sbjct: 18  EDQRRWRNLLAAAKKNGVGTVILSNDPGGLGAAPIRELETNGVVDKVLL----------- 66

Query: 113 DNTDGIENNSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHT 172
                       S +  + KP   A + A    ++  +  +  DDS  N+  A  AGL  
Sbjct: 67  ------------SGELGVEKPEEAAFQAAADAIDLPMRDCVLVDDSILNVRGAVEAGLVG 114

Query: 173 VIVGSSVPVPPADHAL 188
           V              L
Sbjct: 115 VYYQQFDRAVVEIVGL 130

>3s6j_A Hydrolase, haloacid dehalogenase-like family; structural genomics, PSI-2; 2.20A {Pseudomonas syringae PV} Length = 233

 Score = 60.3 bits (147), Expect = 2e-11
 Identities = 25/210 (11%), Positives = 58/210 (27%), Gaps = 42/210 (20%)

Query: 18  ELYREHGTTMAG-----LKAVGYEFDNDEFHAFVHGKLPY-----EKLKPDPVLRNLLLS 67
            ++R+ G +         +  G    +++                 ++   P    LL +
Sbjct: 43  RIHRKIGMSGGLMLKSLSRETGMSITDEQAERLSEKHAQAYERLQHQIIALPGAVELLET 102

Query: 68  MPQRKI---IFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFS 124
           + +  +   I T+     A   L  L L+     I+  + ++                  
Sbjct: 103 LDKENLKWCIATSGGIDTATINLKALKLDINKINIVTRDDVSYG---------------- 146

Query: 125 SNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVPVPP- 183
                  KP  +    A +       + +   D+  ++ +A+      V + S       
Sbjct: 147 -------KPDPDLFLAAAKKIGAPIDECLVIGDAIWDMLAARRCKATGVGLLSGGYDIGE 199

Query: 184 -----ADHALNSIHNIKEAIPEIWEGEGEQ 208
                A        ++   + EI   EG  
Sbjct: 200 LERAGALRVYEDPLDLLNHLDEIASREGHH 229

>2hoq_A Putative HAD-hydrolase PH1655; haloacid dehalogenase, structural genomics, NPPSFA, national on protein structural and functional analyses; 1.70A {Pyrococcus horikoshii} Length = 241

 Score = 60.1 bits (146), Expect = 3e-11
 Identities = 45/226 (19%), Positives = 85/226 (37%), Gaps = 39/226 (17%)

Query: 5   LHIDESEVPRMCLELYREHGTTMAG-----LKAVGYEFDNDEFHAFVHG--KLPYEKLKP 57
           L +D        +EL +E+G+         L+ +   ++     A V       +  L+ 
Sbjct: 36  LPVDFETAYSELIELIKEYGSNFPYHFDYLLRRLDLPYNPKWISAGVIAYHNTKFAYLRE 95

Query: 58  DPVLRNLLLSMPQRKI---IFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADN 114
            P  R +L+ + +      I T+ +     E + RL L+D FE +I  +           
Sbjct: 96  VPGARKVLIRLKELGYELGIITDGNPVKQWEKILRLELDDFFEHVIISDFE--------- 146

Query: 115 TDGIENNSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARN-IASAKAAGLHTV 173
             G++            KP  +  + A++  NV P++ +   D   + I  AK  G+ TV
Sbjct: 147 --GVK------------KPHPKIFKKALKAFNVKPEEALMVGDRLYSDIYGAKRVGMKTV 192

Query: 174 IV----GSSVPVPPADHALNSIHNIKEAIPEIWEGEGEQLEQVIQP 215
                  S   +    +A   I N++  + E+   E    ++V  P
Sbjct: 193 WFRYGKHSERELEYRKYADYEIDNLES-LLEVLARESSSNKKVHPP 237

>2wf7_A Beta-PGM, beta-phosphoglucomutase; transition state analogue, haloacid dehalogenase superfamily, isomerase, phosphotransferase; HET: G7P; 1.05A {Lactococcus lactis} PDB: 1o03_A* 1z4n_A* 1z4o_A* 1zol_A 2wf5_A* 2wf6_A* 1o08_A* 2wf8_A* 2wf9_A* 2wfa_A 2whe_A 1lvh_A* 3fm9_A Length = 221

 Score = 58.4 bits (142), Expect = 1e-10
 Identities = 34/186 (18%), Positives = 60/186 (32%), Gaps = 37/186 (19%)

Query: 30  LKAVGYEFDNDEFHAFVHGKLPY-----EKLKPDPVL---RNLLLSMPQRKI---IFTNA 78
           L     +   +EF      K        + + P  V      LL  +   KI   + + +
Sbjct: 57  LDLADKKVSAEEFKELAKRKNDNYVKMIQDVSPADVYPGILQLLKDLRSNKIKIALASAS 116

Query: 79  DQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCKPSLEAI 138
             K+   +L R+ L   F+ I           PA+                  KP+ +  
Sbjct: 117 --KNGPFLLERMNLTGYFDAIAD---------PAEVAAS--------------KPAPDIF 151

Query: 139 ETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVPVPPADHALNSIHNIK-EA 197
             A     V P ++I  +DS   I + K +G   + VG    +      +    +   E 
Sbjct: 152 IAAAHAVGVAPSESIGLEDSQAGIQAIKDSGALPIGVGRPEDLGDDIVIVPDTSHYTLEF 211

Query: 198 IPEIWE 203
           + E+W 
Sbjct: 212 LKEVWL 217

>2i6x_A Hydrolase, haloacid dehalogenase-like family; HAD superfamily, struct genomics, PSI-2, protein structure initiative; HET: MSE; 2.40A {Porphyromonas gingivalis} Length = 211

 Score = 58.2 bits (141), Expect = 1e-10
 Identities = 25/147 (17%), Positives = 51/147 (34%), Gaps = 23/147 (15%)

Query: 31  KAVGYEFDNDEFHAFVHGKLPYEKLKPDPVLRNLLLSMPQ--RKIIFTNADQKHAMEVLG 88
           + +G E    + +  + G L            + + S+    R  + +N +       + 
Sbjct: 68  RYIGKELTYQQVYDALLGFLEE----ISAEKFDYIDSLRPDYRLFLLSNTNPYVLDLAMS 123

Query: 89  RLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCKPSLEAIETAIRIANVD 148
              L         F+ +                 ++S Q    KP+ +     I  + + 
Sbjct: 124 PRFLPSGRTLDSFFDKV-----------------YASCQMGKYKPNEDIFLEMIADSGMK 166

Query: 149 PKKTIFFDDSARNIASAKAAGLHTVIV 175
           P++T+F DD   N+A+A+  G HT   
Sbjct: 167 PEETLFIDDGPANVATAERLGFHTYCP 193

>3u26_A PF00702 domain protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, unknown function; 1.59A {Pyrococcus horikoshii} PDB: 1x42_A Length = 234

 Score = 57.8 bits (140), Expect = 2e-10
 Identities = 34/187 (18%), Positives = 73/187 (39%), Gaps = 39/187 (20%)

Query: 30  LKAVGYEFDNDEFHAFVHGKLPYEKLKPD--PVLRNLLLSMPQRKI---IFTNADQKHAM 84
            +  G+++  + +   +     Y +L P+   VL++L     + K    + T++D + AM
Sbjct: 76  AEKYGFKYPENFWEISLRMSQRYGELYPEVVEVLKSL-----KGKYHVGMITDSDTEQAM 130

Query: 85  EVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCKPSLEAIETAIRI 144
             L  LG++D F+ I   E             G              KP     E A++ 
Sbjct: 131 AFLDALGIKDLFDSITTSEEA-----------GFF------------KPHPRIFELALKK 167

Query: 145 ANVDPKKTIFFDDSARN-IASAKAAGLHTVIV-GSSVPVPPADHALNSIHNIKEAIPEI- 201
           A V  ++ ++  D+       +K  G+ ++++          D     + +++E + +I 
Sbjct: 168 AGVKGEEAVYVGDNPVKDCGGSKNLGMTSILLDRKGEKREFWDKCDFIVSDLRE-VIKIV 226

Query: 202 --WEGEG 206
               G+G
Sbjct: 227 DELNGQG 233

>4dcc_A Putative haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 1.65A {Bacteroides thetaiotaomicron} PDB: 4dfd_A 4f71_A 4f72_A Length = 229

 Score = 56.7 bits (137), Expect = 4e-10
 Identities = 28/145 (19%), Positives = 47/145 (32%), Gaps = 19/145 (13%)

Query: 31  KAVGYEFDNDEFHAFVHGKLPYEKLKPDPVLRNLLLSMPQRKIIFTNADQKHAMEVLGRL 90
           + +G    + +  A  +  L    +    +   L L       + +N +  H   V    
Sbjct: 91  EMMGKMVSDKQIDAAWNSFLV--DIPTYKLDLLLKLREKYVVYLLSNTNDIHWKWVCKNA 148

Query: 91  GLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCKPSLEAIETAIRIANVDPK 150
                F+    FE                   + S +  + KP  E  +     A +DPK
Sbjct: 149 FPYRTFKVEDYFEKT-----------------YLSYEMKMAKPEPEIFKAVTEDAGIDPK 191

Query: 151 KTIFFDDSARNIASAKAAGLHTVIV 175
           +T F DDS  N   A+  G+ T   
Sbjct: 192 ETFFIDDSEINCKVAQELGISTYTP 216

>3kzx_A HAD-superfamily hydrolase, subfamily IA, variant; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ehrlich chaffeensis; 1.90A {Ehrlichia chaffeensis} Length = 231

 Score = 56.2 bits (136), Expect = 6e-10
 Identities = 26/129 (20%), Positives = 46/129 (35%), Gaps = 25/129 (19%)

Query: 74  IFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCKP 133
           I +N + +     +    L   F+ II                               KP
Sbjct: 124 IVSNKNGERLRSEIHHKNLTHYFDSIIGSGDTGTI-----------------------KP 160

Query: 134 SLEAIETAIRIANVDPKK-TIFFDDSARNIASAKAAGLHTVIVGSSVPVPPADHALNSIH 192
           S E +  A+   N++P K   F  DS  +I SA  AG   +  GS+  +     +  + +
Sbjct: 161 SPEPVLAALTNINIEPSKEVFFIGDSISDIQSAIEAGCLPIKYGSTNIIKD-ILSFKNFY 219

Query: 193 NIKEAIPEI 201
           +I+  I ++
Sbjct: 220 DIRNFICQL 228

>2b0c_A Putative phosphatase; alpha-D-glucose-1-phosphate, structural genomic protein structure initiative, midwest center for structural genomics, MCSG; HET: G1P; 2.00A {Escherichia coli} SCOP: c.108.1.2 Length = 206

 Score = 55.0 bits (133), Expect = 1e-09
 Identities = 21/149 (14%), Positives = 48/149 (32%), Gaps = 31/149 (20%)

Query: 31  KAVGYEFDNDEFHAFVHGKLPYEKLKPDPVLRNLLLSMPQRKI---IFTNADQKHAMEVL 87
             +      ++F            +   P +  ++  + ++     + +N ++ H     
Sbjct: 70  HEMALPLSYEQFSHGWQAVF----VALRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWP 125

Query: 88  GRL-GLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCKPSLEAIETAIRIAN 146
                + D  + I                        S +   + KP     +  ++   
Sbjct: 126 EEYPEIRDAADHIY----------------------LSQDLG-MRKPEARIYQHVLQAEG 162

Query: 147 VDPKKTIFFDDSARNIASAKAAGLHTVIV 175
             P  T+FFDD+A NI  A   G+ +++V
Sbjct: 163 FSPSDTVFFDDNADNIEGANQLGITSILV 191

>2pke_A Haloacid delahogenase-like family hydrolase; NP_639141.1, ST genomics, joint center for structural genomics, JCSG; 1.81A {Xanthomonas campestris PV} Length = 251

 Score = 55.4 bits (133), Expect = 1e-09
 Identities = 18/183 (9%), Positives = 44/183 (24%), Gaps = 43/183 (23%)

Query: 40  DEFHAFVHGKLPYEKLKPDPVLRNLLLSMPQ--RKIIFTNADQKHAMEVLGRLGLEDCFE 97
                     L    ++    +R  + ++      ++ T  D  H  + + + GL D F 
Sbjct: 97  QRIVEIGRATLQ-HPVEVIAGVREAVAAIAADYAVVLITKGDLFHQEQKIEQSGLSDLFP 155

Query: 98  GIICFETINPRLQPADNTDGIENNSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDD 157
            I                                +   +     +   ++  ++ +   +
Sbjct: 156 RIEVVS----------------------------EKDPQTYARVLSEFDLPAERFVMIGN 187

Query: 158 S-ARNIASAKAAGLHTVIVGS-------SVPVPPADHA----LNSIHNIKEAIPEIWEGE 205
           S   ++    A G   +                 AD      +        A+  +    
Sbjct: 188 SLRSDVEPVLAIGGWGIYTPYAVTWAHEQDHGVAADEPRLREVPDPSGWPAAVRALDAQA 247

Query: 206 GEQ 208
           G Q
Sbjct: 248 GRQ 250

>2hsz_A Novel predicted phosphatase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: UNL; 1.90A {Haemophilus somnus 129PT} SCOP: c.108.1.6 Length = 243

 Score = 54.1 bits (131), Expect = 3e-09
 Identities = 21/131 (16%), Positives = 41/131 (31%), Gaps = 29/131 (22%)

Query: 74  IFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCKP 133
           + TN   KH   +L   G++  F  ++  +++                          KP
Sbjct: 135 VVTNKPTKHVQPILTAFGIDHLFSEMLGGQSLPEI-----------------------KP 171

Query: 134 SLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIV------GSSVPVPPADHA 187
                        + PK+ +F  DS  +I +A +AG   V +         +     D  
Sbjct: 172 HPAPFYYLCGKFGLYPKQILFVGDSQNDIFAAHSAGCAVVGLTYGYNYNIPIAQSKPDWI 231

Query: 188 LNSIHNIKEAI 198
            +   +I +  
Sbjct: 232 FDDFADILKIT 242

>2fdr_A Conserved hypothetical protein; SAD, structural genomics, agrobacter tumefaciens, HAD-superfamily hydrolase; 2.00A {Agrobacterium tumefaciens str} SCOP: c.108.1.6 Length = 229

 Score = 53.8 bits (130), Expect = 4e-09
 Identities = 26/162 (16%), Positives = 53/162 (32%), Gaps = 28/162 (17%)

Query: 53  EKLKPDPVLRNLLLSMPQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPA 112
             +K    ++  L  +   + I +N+       +L ++GL+  F   I           +
Sbjct: 84  RDVKIIDGVKFALSRLTTPRCICSNSSSHRLDMMLTKVGLKPYFAPHIY----------S 133

Query: 113 DNTDGIENNSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHT 172
               G +            KP  +          V P + +  +DS   I  A+AAG+  
Sbjct: 134 AKDLGADRV----------KPKPDIFLHGAAQFGVSPDRVVVVEDSVHGIHGARAAGMRV 183

Query: 173 VIVGSSVPVPPADH-------ALNSIHNIKEAIPEIWEGEGE 207
           +    +    P+         A   I  +++ +P +     E
Sbjct: 184 IGFTGASHTYPSHADRLTDAGAETVISRMQD-LPAVIAAMAE 224

>3nas_A Beta-PGM, beta-phosphoglucomutase; PSI, structural genomics, protein structure initiative, NEW research center for structural genomics; 3.00A {Bacillus subtilis} Length = 233

 Score = 53.1 bits (128), Expect = 7e-09
 Identities = 30/124 (24%), Positives = 50/124 (40%), Gaps = 24/124 (19%)

Query: 81  KHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCKPSLEAIET 140
           ++A ++L RL + D F  I+          P     G              KP  +   T
Sbjct: 118 RNAPKILRRLAIIDDFHAIVD---------PTTLAKG--------------KPDPDIFLT 154

Query: 141 AIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVPVPPADHALNSIHNIK-EAIP 199
           A  + +V P      +D+   I++ K+AG+  V VG   P+  AD  +    ++  E + 
Sbjct: 155 AAAMLDVSPADCAAIEDAEAGISAIKSAGMFAVGVGQGQPMLGADLVVRQTSDLTLELLH 214

Query: 200 EIWE 203
           E WE
Sbjct: 215 EEWE 218

>3ed5_A YFNB; APC60080, bacillus subtilis subsp. subtilis STR. 168, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.72A {Bacillus subtilis} PDB: 3i76_A Length = 238

 Score = 52.8 bits (127), Expect = 1e-08
 Identities = 38/177 (21%), Positives = 51/177 (28%), Gaps = 30/177 (16%)

Query: 30  LKAVGYEFDNDEFHAFVHGKLPYEKLKPDPVLRNLL--LSMPQRKIIFTNADQKHAMEVL 87
           LK  GYE D           L  E  +      +L+  L       I TN       + L
Sbjct: 78  LKEYGYEADGALLEQKYRRFLE-EGHQLIDGAFDLISNLQQQFDLYIVTNGVSHTQYKRL 136

Query: 88  GRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCKPSLEAIETAI-RIAN 146
              GL   F+ I   E             G +            KP  E       RI  
Sbjct: 137 RDSGLFPFFKDIFVSEDT-----------GFQ------------KPMKEYFNYVFERIPQ 173

Query: 147 VDPKKTIFFDDSARN-IASAKAAGLHTV-IVGSSVPVPPADHALNSIHNIKEAIPEI 201
              + T+   DS    I   + AGL T  +     P  P       I  ++E +  I
Sbjct: 174 FSAEHTLIIGDSLTADIKGGQLAGLDTCWMNPDMKPNVPEIIPTYEIRKLEE-LYHI 229

>2hdo_A Phosphoglycolate phosphatase; NP_784602.1, structur genomics, PSI-2, protein structure initiative, joint center structural genomics; HET: MSE; 1.50A {Lactobacillus plantarum} SCOP: c.108.1.6 Length = 209

 Score = 52.1 bits (126), Expect = 1e-08
 Identities = 20/129 (15%), Positives = 35/129 (27%), Gaps = 27/129 (20%)

Query: 74  IFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCKP 133
           I T+  +      +            I  +    R                       KP
Sbjct: 103 IVTSQRRNELESGMRSYPFMMRMAVTISADDTPKR-----------------------KP 139

Query: 134 SLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIV----GSSVPVPPADHALN 189
               + TA+   NV P+  +F  DS  +  +A+AA +   +       +       H   
Sbjct: 140 DPLPLLTALEKVNVAPQNALFIGDSVSDEQTAQAANVDFGLAVWGMDPNADHQKVAHRFQ 199

Query: 190 SIHNIKEAI 198
              +I E  
Sbjct: 200 KPLDILELF 208

>2nyv_A Pgpase, PGP, phosphoglycolate phosphatase; structural genomics, PSI-2, protein structure initiative; 2.10A {Aquifex aeolicus} PDB: 2yy6_A Length = 222

 Score = 52.6 bits (127), Expect = 1e-08
 Identities = 19/102 (18%), Positives = 39/102 (38%), Gaps = 23/102 (22%)

Query: 74  IFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCKP 133
           + +N  ++ + ++L  L L   F+ I+  +T   +                       KP
Sbjct: 104 VVSNKLEELSKKILDILNLSGYFDLIVGGDTFGEK-----------------------KP 140

Query: 134 SLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIV 175
           S   +   + I   +P+K +   D+  +I + K AG  T + 
Sbjct: 141 SPTPVLKTLEILGEEPEKALIVGDTDADIEAGKRAGTKTALA 182

>3d6j_A Putative haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides fragilis nctc 9343} Length = 225

 Score = 52.6 bits (127), Expect = 1e-08
 Identities = 20/102 (19%), Positives = 34/102 (33%), Gaps = 23/102 (22%)

Query: 74  IFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCKP 133
           I +   +   +  L     +D F+ II  E +                          KP
Sbjct: 110 IISTKYRFRILSFLRNHMPDDWFDIIIGGEDVTHH-----------------------KP 146

Query: 134 SLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIV 175
             E +  AI      P++ ++  DS  +  +A AAG+    V
Sbjct: 147 DPEGLLLAIDRLKACPEEVLYIGDSTVDAGTAAAAGVSFTGV 188

>2om6_A Probable phosphoserine phosphatase; rossmann fold, B-hairpin, four-helix bundle, structural GENO NPPSFA; 2.20A {Pyrococcus horikoshii} Length = 235

 Score = 51.7 bits (124), Expect = 2e-08
 Identities = 21/136 (15%), Positives = 41/136 (30%), Gaps = 31/136 (22%)

Query: 74  IFTNAD---QKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRIL 130
           +  N       +   +L R GL +  +     + +                         
Sbjct: 120 VIGNVMFWPGSYTRLLLERFGLMEFIDKTFFADEV-----------LSY----------- 157

Query: 131 CKPSLEAIETAIRIANVDPKKTIFFDDSARN-IASAKAAGLHTVIV----GSSVPVPPAD 185
            KP  E  E  +    V P++++   D+       A+  G+  V +         +    
Sbjct: 158 -KPRKEMFEKVLNSFEVKPEESLHIGDTYAEDYQGARKVGMWAVWINQEGDKVRKLEERG 216

Query: 186 HALNSIHNIKEAIPEI 201
             + SI N+K+ I  I
Sbjct: 217 FEIPSIANLKDVIELI 232

>3mc1_A Predicted phosphatase, HAD family; PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.93A {Clostridium acetobutylicum} Length = 226

 Score = 49.9 bits (120), Expect = 9e-08
 Identities = 31/217 (14%), Positives = 66/217 (30%), Gaps = 56/217 (25%)

Query: 1   MSQHLHIDESEVPRMCLELYREHGTTMAGLKAVGYEFDNDEFHAFVHGKLPYEKLKPDPV 60
             ++ + DE       ++ YR++           ++     F         Y+ ++    
Sbjct: 55  FMEYYNFDEETATVA-IDYYRDY-----------FK-AKGMFENK-----VYDGIEA--- 93

Query: 61  LRNLLLSMPQRKI---IFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDG 117
              LL S+        + T+     + ++L    L   F+ I+                 
Sbjct: 94  ---LLSSLKDYGFHLVVATSKPTVFSKQILEHFKLAFYFDAIVGSSLDGKL--------- 141

Query: 118 IENNSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIV-- 175
                             + I  A+   N+     I   D   ++  A    L ++ V  
Sbjct: 142 --------------STKEDVIRYAMESLNIKSDDAIMIGDREYDVIGALKNNLPSIGVTY 187

Query: 176 --GSSVPVPP--ADHALNSIHNIKEAIPEIWEGEGEQ 208
             GS   +    A++ +NS+  + + I E+ EG    
Sbjct: 188 GFGSYEELKNAGANYIVNSVDELHKKILELREGHHHH 224

>3ib6_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.20A {Listeria monocytogenes} Length = 189

 Score = 49.4 bits (118), Expect = 1e-07
 Identities = 27/197 (13%), Positives = 59/197 (29%), Gaps = 37/197 (18%)

Query: 30  LKAVGYEFDNDEFHAFVHGKL-PYEKLKPDPVLRNLLLSMPQRKI---IFTNADQKHA-- 83
           +  +G   +      + H  L  Y ++      +  L  + Q      I +N        
Sbjct: 7   IWDMGETLNTVPNTRYDHHPLDTYPEVVLRKNAKETLEKVKQLGFKQAILSNTATSDTEV 66

Query: 84  -MEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCKPSLEAIETAI 142
              VL   G+ D F+ I    +             +E            KP     +  +
Sbjct: 67  IKRVLTNFGIIDYFDFIYASNSELQPG-------KME------------KPDKTIFDFTL 107

Query: 143 RIANVDPKKTIFFDDSARN-IASAKAAGLHTVIV----------GSSVPVPPADHALNSI 191
               +D  + +   ++  + I  A  AG+H + +             +  PP    +  +
Sbjct: 108 NALQIDKTEAVMVGNTFESDIIGANRAGIHAIWLQNPEVCLQDERLPLVAPPFVIPVWDL 167

Query: 192 HNIKEAIPEIWEGEGEQ 208
            ++ EA+  + +     
Sbjct: 168 ADVPEALLLLKKISEGH 184

>3k1z_A Haloacid dehalogenase-like hydrolase domain-conta protein 3; HDHD3, haloacid dehalogenase-like hydrolase domain containin structural genomics; 1.55A {Homo sapiens} Length = 263

 Score = 49.8 bits (119), Expect = 1e-07
 Identities = 30/144 (20%), Positives = 56/144 (38%), Gaps = 33/144 (22%)

Query: 74  IFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCKP 133
           + +N D+     +LG LGL + F+ ++  E             G              KP
Sbjct: 127 VISNFDR-RLEGILGGLGLREHFDFVLTSEAA-----------GWP------------KP 162

Query: 134 SLEAIETAIRIANVDPKKTIFFDDSARN-IASAKAAGLHTVIVGSSVPVPP-------AD 185
                + A+R+A+++P       D+        +A G+H+ +V     + P        +
Sbjct: 163 DPRIFQEALRLAHMEPVVAAHVGDNYLCDYQGPRAVGMHSFLVVGPQALDPVVRDSVPKE 222

Query: 186 HALNSIHNIKEAIPEIWEGEGEQL 209
           H L S+ ++  A+ +  EG  E L
Sbjct: 223 HILPSLAHLLPAL-DCLEGSAENL 245

>3e58_A Putative beta-phosphoglucomutase; structu genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.86A {Streptococcus thermophilus lmg 18311} Length = 214

 Score = 49.1 bits (118), Expect = 2e-07
 Identities = 20/126 (15%), Positives = 47/126 (37%), Gaps = 26/126 (20%)

Query: 76  TNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCKPSL 135
           +++ +      L    L+  F+ ++            +     + +          KP+ 
Sbjct: 112 SSSVKADIFRALEENRLQGFFDIVLS----------GEE---FKES----------KPNP 148

Query: 136 EAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVPVPP---ADHALNSIH 192
           E   TA++  NV   + +  +DS + IA+  AA +    +  +        A   L+S+ 
Sbjct: 149 EIYLTALKQLNVQASRALIIEDSEKGIAAGVAADVEVWAIRDNEFGMDQSAAKGLLDSLT 208

Query: 193 NIKEAI 198
           ++ + I
Sbjct: 209 DVLDLI 214

>2hi0_A Putative phosphoglycolate phosphatase; YP_619066.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.51A {Lactobacillus delbrueckii} Length = 240

 Score = 49.2 bits (118), Expect = 2e-07
 Identities = 17/131 (12%), Positives = 45/131 (34%), Gaps = 30/131 (22%)

Query: 74  IFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCKP 133
           + +N   +    ++  L     F+  +  ++   R                       KP
Sbjct: 131 VVSNKPNEAVQVLVEEL-FPGSFDFALGEKSGIRR-----------------------KP 166

Query: 134 SLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIV------GSSVPVPPADHA 187
           + +     +++  V   K ++  DS  +I +A+ + +  + V         +    A   
Sbjct: 167 APDMTSECVKVLGVPRDKCVYIGDSEIDIQTARNSEMDEIAVNWGFRSVPFLQKHGATVI 226

Query: 188 LNSIHNIKEAI 198
           +++   ++EAI
Sbjct: 227 VDTAEKLEEAI 237

>1qq5_A Protein (L-2-haloacid dehalogenase); hydrolase; 1.52A {Xanthobacter autotrophicus} SCOP: c.108.1.1 PDB: 1qq6_A* 1qq7_A* 1aq6_A Length = 253

 Score = 49.1 bits (117), Expect = 2e-07
 Identities = 26/145 (17%), Positives = 45/145 (31%), Gaps = 27/145 (18%)

Query: 30  LKAVGYEFDNDEFHAFVHGKLPYEKLKPDP-VLRNLLLSMPQRKIIFTNADQKHAMEVLG 88
           L  +G E D             Y +L P P   + L    P ++ I +N        ++ 
Sbjct: 70  LGTLGLEPDESFLADMAQA---YNRLTPYPDAAQCLAELAPLKRAILSNGAPDMLQALVA 126

Query: 89  RLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCKPSLEAIETAIRIANVD 148
             GL D F+ +I  +                   F        KP  ++      +  V 
Sbjct: 127 NAGLTDSFDAVISVDAKR---------------VF--------KPHPDSYALVEEVLGVT 163

Query: 149 PKKTIFFDDSARNIASAKAAGLHTV 173
           P + +F   +  ++  AK  G    
Sbjct: 164 PAEVLFVSSNGFDVGGAKNFGFSVA 188

>2go7_A Hydrolase, haloacid dehalogenase-like family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.10A {Streptococcus pneumoniae} SCOP: c.108.1.6 Length = 207

 Score = 48.7 bits (117), Expect = 2e-07
 Identities = 17/94 (18%), Positives = 34/94 (36%), Gaps = 23/94 (24%)

Query: 82  HAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCKPSLEAIETA 141
           +A  +L  LG+E  F  I+  ++   R                       KPS EA    
Sbjct: 113 NAFTILKDLGVESYFTEILTSQSGFVR-----------------------KPSPEAATYL 149

Query: 142 IRIANVDPKKTIFFDDSARNIASAKAAGLHTVIV 175
           +    ++   T +  D   ++  A+ +G+ ++  
Sbjct: 150 LDKYQLNSDNTYYIGDRTLDVEFAQNSGIQSINF 183

>3qnm_A Haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 1.70A {Bacteroides thetaiotaomicron} Length = 240

 Score = 48.9 bits (117), Expect = 2e-07
 Identities = 32/204 (15%), Positives = 59/204 (28%), Gaps = 39/204 (19%)

Query: 3   QHLHIDESEV-PRMCLELYREHGTTMAGLKAVGYEFDNDEFHAFVHGKLPYEKLKPDPVL 61
               + + E+  +      +  G     L      F  D F             K   VL
Sbjct: 62  GEGKVTKEELNRQRFFYPLQAVGVEDEALAE---RFSEDFFAIIPTKSGLMPHAKE--VL 116

Query: 62  RNLLLSMPQRKI---IFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGI 118
             L       +    I +N  ++     +   G++  F+ II  E +           G+
Sbjct: 117 EYL-----APQYNLYILSNGFRELQSRKMRSAGVDRYFKKIILSEDL-----------GV 160

Query: 119 ENNSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARN-IASAKAAGLHTVIVGS 177
                        KP  E    A+     + ++++   DS    I  A   G+H      
Sbjct: 161 L------------KPRPEIFHFALSATQSELRESLMIGDSWEADITGAHGVGMHQAFYNV 208

Query: 178 SVPVPPADHALNSIHNIKEAIPEI 201
           +            IH++KE +  +
Sbjct: 209 TERTVFPFQPTYHIHSLKE-LMNL 231

>2gfh_A Haloacid dehalogenase-like hydrolase domain conta; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.90A {Mus musculus} SCOP: c.108.1.6 PDB: 2w4m_A Length = 260

 Score = 48.7 bits (116), Expect = 3e-07
 Identities = 27/186 (14%), Positives = 58/186 (31%), Gaps = 43/186 (23%)

Query: 30  LKAVGYEFDNDE-----FHAFVHGKLPYEKLKPD--PVLRNLLLSMPQRKI---IFTNAD 79
           ++      DN +     +  +   +L +  L  D   +L  L     ++++   + TN D
Sbjct: 92  IQETKGGADNRKLAEECYFLWKSTRLQHMILADDVKAMLTEL-----RKEVRLLLLTNGD 146

Query: 80  QKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCKPSLEAIE 139
           ++   E +     +  F+ I+                  E            KP+     
Sbjct: 147 RQTQREKIEACACQSYFDAIVIGGEQ-----------KEE------------KPAPSIFY 183

Query: 140 TAIRIANVDPKKTIFFDDSARN-IASAKAAGLHTVI---VGSSVPVPPADHALNSIHNIK 195
               +  V P   +   D+    I     AGL   +       VP+  +      + ++ 
Sbjct: 184 HCCDLLGVQPGDCVMVGDTLETDIQGGLNAGLKATVWINKSGRVPLTSSPMPHYMVSSVL 243

Query: 196 EAIPEI 201
           E +P +
Sbjct: 244 E-LPAL 248

>4g9b_A Beta-PGM, beta-phosphoglucomutase; HAD, putative phosphoglucomutase, enzyme function initiative structural genomics, isomerase; 1.70A {Escherichia coli} Length = 243

 Score = 48.4 bits (116), Expect = 3e-07
 Identities = 24/130 (18%), Positives = 43/130 (33%), Gaps = 26/130 (20%)

Query: 81  KHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCKPSLEAIET 140
            +A  +L  L L + F               +   +               KP  E    
Sbjct: 121 LNAPTILAALELREFFTFCAD---------ASQLKNS--------------KPDPEIFLA 157

Query: 141 AIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVPVPPADHALNSIHNIK-EAIP 199
           A     V P+  I  +D+   I +  A+G+ +V +G+   +  A   L S  ++    + 
Sbjct: 158 ACAGLGVPPQACIGIEDAQAGIDAINASGMRSVGIGA--GLTGAQLLLPSTESLTWPRLS 215

Query: 200 EIWEGEGEQL 209
             W+   E L
Sbjct: 216 AFWQNVAENL 225

>1qyi_A ZR25, hypothetical protein; structural genomics, PSI, protein structure initiative, NORT structural genomics consortium, NESG; 2.50A {Staphylococcus aureus subsp} SCOP: c.108.1.13 Length = 384

 Score = 49.0 bits (116), Expect = 4e-07
 Identities = 32/227 (14%), Positives = 64/227 (28%), Gaps = 21/227 (9%)

Query: 3   QHLHIDESEVPRMCLELYREHGTT----MAGLKAVGYEFDNDEFHAFVHGKLPYEK-LKP 57
             LH+ ++ +  +   L+            G K             F  G +  E  L+P
Sbjct: 157 TELHVSDATLFSLKGALWTLAQEVYQEWYLGSKLYEDVEKKIARTTFKTGYIYQEIILRP 216

Query: 58  DPVLRNLLLSMPQRKI---IFTNADQKHAMEVLGRLGLEDCFEG---IICFETINPRLQP 111
              ++ LL  +        I T       +     LGL   FE        + +      
Sbjct: 217 VDEVKVLLNDLKGAGFELGIATGRPYTETVVPFENLGLLPYFEADFIATASDVLEAENMY 276

Query: 112 ADNTDGIENNSFSSNQRILCKPSLEAIETAI-RIANVDPKKTIFFDDSARNIASAKAAGL 170
                  + N FS    +      +       +   V+        DS  ++ SA+  G 
Sbjct: 277 PQARPLGKPNPFSYIAALYGNNRDKYESYINKQDNIVNKDDVFIVGDSLADLLSAQKIGA 336

Query: 171 HTVIVGSSVPVPP---------ADHALNSIHNIKEAIPEIWEGEGEQ 208
             +   + +             AD+ +N +  ++  +  + E     
Sbjct: 337 TFIGTLTGLKGKDAAGELEAHHADYVINHLGELRGVLDNLLEHHHHH 383

>1te2_A Putative phosphatase; structural genomics, phosphates, PSI, protein S initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.76A {Escherichia coli} SCOP: c.108.1.6 Length = 226

 Score = 48.0 bits (115), Expect = 5e-07
 Identities = 19/124 (15%), Positives = 42/124 (33%), Gaps = 28/124 (22%)

Query: 76  TNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCKPSL 135
           + +      +VL    L D F+ +                + +  +          KP  
Sbjct: 117 SASPLHMLEKVLTMFDLRDSFDALAS-------------AEKLPYS----------KPHP 153

Query: 136 EAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVPVPP-----ADHALNS 190
           +          VDP   +  +DS   + ++KAA + +++V +           A+  L+S
Sbjct: 154 QVYLDCAAKLGVDPLTCVALEDSVNGMIASKAARMRSIVVPAPEAQNDPRFVLANVKLSS 213

Query: 191 IHNI 194
           +  +
Sbjct: 214 LTEL 217

>2no4_A (S)-2-haloacid dehalogenase IVA; HAD superfamily, rossman fold, hydrol; 1.93A {Burkholderia cepacia} PDB: 2no5_A* Length = 240

 Score = 46.8 bits (111), Expect = 1e-06
 Identities = 21/147 (14%), Positives = 42/147 (28%), Gaps = 29/147 (19%)

Query: 30  LKAVGYEFDNDEFHAFVHGKLPYEKLKPDPVLRNLLLSMPQRKI---IFTNADQKHAMEV 86
           L+    E         +     Y++L   P     L  +        I +N + +     
Sbjct: 82  LRTYHLEDRKGLKDRLMSA---YKELSAYPDAAETLEKLKSAGYIVAILSNGNDEMLQAA 138

Query: 87  LGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCKPSLEAIETAIRIAN 146
           L    L+   +  +  + +                        + KP     + A     
Sbjct: 139 LKASKLDRVLDSCLSADDLK-----------------------IYKPDPRIYQFACDRLG 175

Query: 147 VDPKKTIFFDDSARNIASAKAAGLHTV 173
           V+P +  F   +A ++  A   G +TV
Sbjct: 176 VNPNEVCFVSSNAWDLGGAGKFGFNTV 202

>2fi1_A Hydrolase, haloacid dehalogenase-like family; structural genomics, haloacid dehalogenase-like F PSI, protein structure initiative; 1.40A {Streptococcus pneumoniae} SCOP: c.108.1.3 Length = 190

 Score = 46.4 bits (111), Expect = 1e-06
 Identities = 14/102 (13%), Positives = 34/102 (33%), Gaps = 26/102 (25%)

Query: 74  IFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCKP 133
           + ++ +    +E+L +  +   F  ++   +   R                       KP
Sbjct: 103 LVSHRND-QVLEILEKTSIAAYFTEVVTSSSGFKR-----------------------KP 138

Query: 134 SLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIV 175
           + E++        +     +   D   +I + +AAGL T + 
Sbjct: 139 NPESMLYLREKYQISS--GLVIGDRPIDIEAGQAAGLDTHLF 178

>1zrn_A L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseudomonas SP} SCOP: c.108.1.1 PDB: 1zrm_A 1jud_A 1qh9_A Length = 232

 Score = 46.0 bits (109), Expect = 2e-06
 Identities = 26/208 (12%), Positives = 59/208 (28%), Gaps = 35/208 (16%)

Query: 6   HIDESEVPRMCLELYREHGTTMAGLKAVGYEFDNDEFHAFVHGKLPYEKLKPDPVLRNLL 65
           +++  +     L        T   L                    P+ ++         L
Sbjct: 57  YVNFQQATEDALR------FTCRHLGLDLDARTRSTLCDAYLRLAPFSEVPDSL---REL 107

Query: 66  LSMPQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSS 125
                +  I +N   +    V+   GL D F+ ++  + +                    
Sbjct: 108 KRRGLKLAILSNGSPQSIDAVVSHAGLRDGFDHLLSVDPVQVY----------------- 150

Query: 126 NQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIV--GSSVPVPP 183
                 KP     E A +   +D    +F   +A +   A+  G  T  +    +V    
Sbjct: 151 ------KPDNRVYELAEQALGLDRSAILFVASNAWDATGARYFGFPTCWINRTGNVFEEM 204

Query: 184 ADHALNSIHNIKEAIPEIWEGEGEQLEQ 211
                  + +++  + E++E    + E+
Sbjct: 205 GQTPDWEVTSLRA-VVELFETAAGKAEK 231

>3ddh_A Putative haloacid dehalogenase-like family hydrol; hydrolase, HAD superfamily, ST genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides thetaiotaomicron} Length = 234

 Score = 46.0 bits (109), Expect = 2e-06
 Identities = 19/150 (12%), Positives = 42/150 (28%), Gaps = 36/150 (24%)

Query: 59  PVLRNLLLSMPQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGI 118
             L+ L  +   + ++ T  D       L R GL   F+ I                   
Sbjct: 112 ETLKTLKETGKYKLVVATKGDLLDQENKLERSGLSPYFDHIEVMS--------------- 156

Query: 119 ENNSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARN-IASAKAAGLHTVIV-- 175
                          + +     + I  + P + +   +S ++ I    + G + V +  
Sbjct: 157 -------------DKTEKEYLRLLSILQIAPSELLMVGNSFKSDIQPVLSLGGYGVHIPF 203

Query: 176 ----GSSVPVPPADHALNSIHNIKEAIPEI 201
                  V    A   L  +  + + +  +
Sbjct: 204 EVMWKHEVTETFAHERLKQVKRLDD-LLSL 232

>2wm8_A MDP-1, magnesium-dependent phosphatase 1; haloacid dehalogenase, protein phosphatase, hydrolase, magne metal-binding; 1.75A {Homo sapiens} PDB: 1u7o_A 1u7p_A Length = 187

 Score = 45.0 bits (106), Expect = 3e-06
 Identities = 30/192 (15%), Positives = 50/192 (26%), Gaps = 49/192 (25%)

Query: 3   QHLHIDESEVPRMCLELYREHGTTMAGLKAVGYEFDND--EFHAFVHGKLPYEKLKPDPV 60
            H H   S V      LY +    +   K   ++ D     F    H   P+ K     V
Sbjct: 2   HHHHHHSSGVDLGTENLYFQSMARL--PKLAVFDLDYTLWPFWVDTHVDPPFHKSSDGTV 59

Query: 61  L-------------RNLLLSMPQRKIIFT----NADQKHAMEVLGRLGLEDCFEGIICFE 103
                           +L  +    +        ++ + A ++L    L   F       
Sbjct: 60  RDRRGQDVRLYPEVPEVLKRLQSLGVPGAAASRTSEIEGANQLLELFDLFRYF----VHR 115

Query: 104 TINPRLQPADNTDGIENNSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIA 163
            I P                           +   E   +   +   + IFFDD  RNI 
Sbjct: 116 EIYP------------------------GSKITHFERLQQKTGIPFSQMIFFDDERRNIV 151

Query: 164 SAKAAGLHTVIV 175
                G+  + +
Sbjct: 152 DVSKLGVTCIHI 163

>4eek_A Beta-phosphoglucomutase-related protein; hydrolase, magnesium binding site, enzyme function initiativ; 1.60A {Deinococcus radiodurans} PDB: 4eel_A* 4een_A Length = 259

 Score = 45.1 bits (107), Expect = 5e-06
 Identities = 26/194 (13%), Positives = 49/194 (25%), Gaps = 57/194 (29%)

Query: 30  LKAVGYEFDNDEFHAFVHGKLPYE------------------------------KLKPDP 59
           L   G   D  E   +  G+                                   +    
Sbjct: 54  LAERGLHLDLTEIAMYFTGQRFDGVLAYLAQQHDFVPPPDFLDVLETRFNAAMTGVTAIE 113

Query: 60  VLRNLLLSMPQRKI---IFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTD 116
                L ++    +   I +N+++      L   GL +     I                
Sbjct: 114 GAAETLRALRAAGVPFAIGSNSERGRLHLKLRVAGLTELAGEHI---------------- 157

Query: 117 GIENNSFSSNQRILC-KPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTV-I 174
                 +  +      KP  +    A +   + P++ +  +DS    A+  AAG     +
Sbjct: 158 ------YDPSWVGGRGKPHPDLYTFAAQQLGILPERCVVIEDSVTGGAAGLAAGATLWGL 211

Query: 175 VGSSVPVPPADHAL 188
           +    P P    AL
Sbjct: 212 LVPGHPHPDGAAAL 225

>2qlt_A (DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, saccharom cerevisiae, structural genomics, PSI-2, protein structure initiative; 1.60A {Saccharomyces cerevisiae} Length = 275

 Score = 44.7 bits (106), Expect = 6e-06
 Identities = 34/216 (15%), Positives = 71/216 (32%), Gaps = 47/216 (21%)

Query: 19  LYREHG-TTMAGLKAVGYEFDNDEFHAFVHGKLPY---EKLKPDPVLRNLLLSMPQRKI- 73
           ++  HG  T   +     +F ++E+   + G++P    E     P    L  ++      
Sbjct: 73  IHISHGWRTYDAIAKFAPDFADEEYVNKLEGEIPEKYGEHSIEVPGAVKLCNALNALPKE 132

Query: 74  ---IFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRIL 130
              + T+  +  A +    L ++   E  I            D   G             
Sbjct: 133 KWAVATSGTRDMAKKWFDILKIKR-PEYFITAN---------DVKQG------------- 169

Query: 131 CKPS-------LEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVPVPP 183
            KP           +   I   +    K + F+D+   IA+ KAAG   V + ++  +  
Sbjct: 170 -KPHPEPYLKGRNGLGFPINEQDPSKSKVVVFEDAPAGIAAGKAAGCKIVGIATTFDLDF 228

Query: 184 -----ADHALNSIHNIKEAIPEIWEGEGEQLEQVIQ 214
                 D  + +  +I+      +  E +++E +  
Sbjct: 229 LKEKGCDIIVKNHESIR---VGEYNAETDEVELIFD 261

>2zg6_A Putative uncharacterized protein ST2620, probable 2-haloalkanoic; probable 2-haloalkanoic acid dehalogenase, hydrolase, structural genomics; 2.40A {Sulfolobus tokodaii} Length = 220

 Score = 44.7 bits (106), Expect = 6e-06
 Identities = 18/176 (10%), Positives = 43/176 (24%), Gaps = 31/176 (17%)

Query: 30  LKAVGYEFDNDEFHAFVHGKLPYEKLKPDPVLRNLLLSMPQRKI---IFTNADQKHAMEV 86
           L  +G               +   +          L  +        + +NA       +
Sbjct: 69  LYILGIYPSERLVKELKEADIRDGEAFLYDDTLEFLEGLKSNGYKLALVSNASP-RVKTL 127

Query: 87  LGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCKPSLEAIETAIRIAN 146
           L +  L+  F+ +     I                          KP+ +    A+    
Sbjct: 128 LEKFDLKKYFDALALSYEI-----------KAV------------KPNPKIFGFALAKVG 164

Query: 147 VDPKKTIFFDDSARN-IASAKAAGLHTVIVGSSVPVPPADHALNSIHNIKEAIPEI 201
                 +   D        AK + +  +++      P     + ++    + I E+
Sbjct: 165 YP---AVHVGDIYELDYIGAKRSYVDPILLDRYDFYPDVRDRVKNLREALQKIEEM 217

>3m9l_A Hydrolase, haloacid dehalogenase-like family; HAD family hydrolase, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Pseudomonas fluorescens} PDB: 2ybd_A* 3r09_A* Length = 205

 Score = 43.8 bits (104), Expect = 1e-05
 Identities = 21/127 (16%), Positives = 38/127 (29%), Gaps = 26/127 (20%)

Query: 76  TNADQKHAMEVLGRLGLEDCFEG-IICFETINPRLQPADNTDGIENNSFSSNQRILCKPS 134
           T   ++ A   L  +GL DCF    +      P                        KP 
Sbjct: 93  TRNARELAHVTLEAIGLADCFAEADVLGRDEAPP-----------------------KPH 129

Query: 135 LEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIV--GSSVPVPPADHALNSIH 192
              +       +V P + +   D   ++   +AAG  TV+V    +      D       
Sbjct: 130 PGGLLKLAEAWDVSPSRMVMVGDYRFDLDCGRAAGTRTVLVNLPDNPWPELTDWHARDCA 189

Query: 193 NIKEAIP 199
            +++ + 
Sbjct: 190 QLRDLLS 196

>3qxg_A Inorganic pyrophosphatase; hydrolase, magnesium binding site, NEW YORK research center for structural genomics; HET: TLA; 1.24A {Bacteroides thetaiotaomicron} PDB: 3qu2_A* 3qx7_A 3quq_A* 3r9k_A 3qut_A 3qu9_A* 3qu7_A 3qu5_A 3qyp_A 3quc_A 3qub_A 3qu4_A Length = 243

 Score = 44.2 bits (105), Expect = 1e-05
 Identities = 26/185 (14%), Positives = 61/185 (32%), Gaps = 37/185 (20%)

Query: 31  KAVGYEFDNDEFHAFVHGK----LPYEKLKPDPVLRNLLLSMPQRKI---IFTNADQKHA 83
           + +G E   +E  +  H K      Y + +  P    LL  +    +   + T + Q   
Sbjct: 80  RELGKEATQEEIESIYHEKSILFNSYPEAERMPGAWELLQKVKSEGLTPMVVTGSGQLSL 139

Query: 84  ME-VLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCKPSLEAIETAI 142
           +E +          E ++           A +   ++            KP+ E    A+
Sbjct: 140 LERLEHNFPGMFHKELMVT----------AFD---VKYG----------KPNPEPYLMAL 176

Query: 143 RIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVPVPP------ADHALNSIHNIKE 196
           +   +   + +  +++   + +   AG+ T+ V +            AD    S+  + +
Sbjct: 177 KKGGLKADEAVVIENAPLGVEAGHKAGIFTIAVNTGPLDGQVLLDAGADLLFPSMQTLCD 236

Query: 197 AIPEI 201
           +   I
Sbjct: 237 SWDTI 241

>3sd7_A Putative phosphatase; structural genomics, haloacid dehalogenase-like hydrolase, H center for structural genomics of infectious diseases; HET: PGE; 1.70A {Clostridium difficile} Length = 240

 Score = 42.6 bits (101), Expect = 3e-05
 Identities = 19/103 (18%), Positives = 32/103 (31%), Gaps = 24/103 (23%)

Query: 74  IFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCKP 133
           + T+     A  +L    ++  F+ I        R                         
Sbjct: 131 VATSKPTVFAETILRYFDIDRYFKYIAGSNLDGTR-----------------------VN 167

Query: 134 SLEAIETAIRIANV-DPKKTIFFDDSARNIASAKAAGLHTVIV 175
             E I+  + + NV D  K I   D   +I  AK  G+ ++ V
Sbjct: 168 KNEVIQYVLDLCNVKDKDKVIMVGDRKYDIIGAKKIGIDSIGV 210

>1yns_A E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo sapiens} SCOP: c.108.1.22 PDB: 1zs9_A Length = 261

 Score = 42.5 bits (99), Expect = 3e-05
 Identities = 9/44 (20%), Positives = 16/44 (36%)

Query: 132 KPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIV 175
           K   E+               +F  D  R  ++A+ A +H  +V
Sbjct: 187 KVESESYRKIADSIGCSTNNILFLTDVTREASAAEEADVHVAVV 230

>2ah5_A COG0546: predicted phosphatases; MCSG, structural genomics, hydrola haloacid dehalogenase-like, PSI; 1.74A {Streptococcus pneumoniae} SCOP: c.108.1.6 Length = 210

 Score = 41.3 bits (98), Expect = 8e-05
 Identities = 17/102 (16%), Positives = 34/102 (33%), Gaps = 25/102 (24%)

Query: 74  IFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCKP 133
           I T  D   A ++   L +   F+GI       P                        K 
Sbjct: 104 ITTTKDTSTAQDMAKNLEIHHFFDGIYGSSPEAPH-----------------------KA 140

Query: 134 SLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIV 175
             + I  A++   + P++ I   D+  ++  A+  G+  + +
Sbjct: 141 --DVIHQALQTHQLAPEQAIIIGDTKFDMLGARETGIQKLAI 180

>2g80_A Protein UTR4; YEL038W, UTR4 protein (unknown transcript 4 protein), struct genomics, PSI, protein structure initiative; 2.28A {Saccharomyces cerevisiae} SCOP: c.108.1.22 Length = 253

 Score = 40.9 bits (95), Expect = 1e-04
 Identities = 7/44 (15%), Positives = 17/44 (38%)

Query: 132 KPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIV 175
           K   ++    +R       + +F  D+   + +A   G+ T + 
Sbjct: 187 KTETQSYANILRDIGAKASEVLFLSDNPLELDAAAGVGIATGLA 230

>3iru_A Phoshonoacetaldehyde hydrolase like protein; phosphonoacetaldehyde hydrolase like P structural genomics, PSI-2, protein structure initiative; 2.30A {Oleispira antarctica} Length = 277

 Score = 40.7 bits (95), Expect = 1e-04
 Identities = 24/202 (11%), Positives = 46/202 (22%), Gaps = 42/202 (20%)

Query: 5   LHIDESEVPRMCLELYREHGTTMAGLKAV--------GYEFDNDEFHAFVHGKLPY---- 52
           + + ++E          EH   M G   +        G   + ++         P     
Sbjct: 46  IEVTQAEAREPMGTEKSEHIRRMLGNSRIANAWLSIKGQASNEEDIKRLYDLFAPIQTRI 105

Query: 53  --EKLKPDPVLRNLLLSMPQRKI---IFTNADQKHAMEVLGRLGLED-CFEGIICFETIN 106
             ++ +  P  + +   +  + I     T          L     +       +    + 
Sbjct: 106 VAQRSQLIPGWKEVFDKLIAQGIKVGGNTGYGPGMMAPALIAAKEQGYTPASTVFATDVV 165

Query: 107 PRLQPADNTDGIENNSFSSNQRILCKPSLEAIETAIRIANV-DPKKTIFFDDSARNIASA 165
                                    +P  +          V      I  DD+   I   
Sbjct: 166 RG-----------------------RPFPDMALKVALELEVGHVNGCIKVDDTLPGIEEG 202

Query: 166 KAAGLHTVIVGSSVPVPPADHA 187
             AG+ TV V  S      D  
Sbjct: 203 LRAGMWTVGVSCSGNEVGLDRE 224

>1swv_A Phosphonoacetaldehyde hydrolase; HAD enzyme superfamily, phosphonotase, metal binding; 2.30A {Bacillus cereus} SCOP: c.108.1.3 PDB: 1sww_A 2iof_A* 2ioh_A 1rql_A 1rqn_A 2iof_K* 1rdf_A 1fez_A Length = 267

 Score = 40.6 bits (95), Expect = 2e-04
 Identities = 32/198 (16%), Positives = 59/198 (29%), Gaps = 33/198 (16%)

Query: 11  EVPRMCLELYREHGTTMAGLKAVGYEFDNDEFHAFVHGKLPYEKLKPDPVLRNLLLSMPQ 70
           E+PR+  E  R              +   +EF   +   LP     P   ++ ++ S+ +
Sbjct: 62  EMPRIASEWNRVFRQLPT---EADIQEMYEEFEEILFAILP-RYASPINGVKEVIASLRE 117

Query: 71  RKI---IFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQ 127
           R I     T   ++    V     L+      +          P D   G          
Sbjct: 118 RGIKIGSTTGYTREMMDIVAKEAALQGYKPDFLV--------TPDDVPAG---------- 159

Query: 128 RILCKPSLEAIETAIRIANVDP-KKTIFFDDSARNIASAKAAGLHTVIV---GSSVPVPP 183
               +P             V P    I   D+  ++   + AG+ TV V    S + +  
Sbjct: 160 ----RPYPWMCYKNAMELGVYPMNHMIKVGDTVSDMKEGRNAGMWTVGVILGSSELGLTE 215

Query: 184 ADHALNSIHNIKEAIPEI 201
            +        ++E I  +
Sbjct: 216 EEVENMDSVELREKIEVV 233

>3dv9_A Beta-phosphoglucomutase; structural genomics, APC60149, PSI- protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.72A {Bacteroides vulgatus} Length = 247

 Score = 40.4 bits (95), Expect = 2e-04
 Identities = 31/219 (14%), Positives = 67/219 (30%), Gaps = 45/219 (20%)

Query: 3   QHLHIDESEVPRMCLELYREHGTTMAGLKAVGYEFDNDEFHAFVHGKLPYEKLKPDPVLR 62
            H     +    +     R H  T   +KA+      +EF+     K P  +  P     
Sbjct: 63  MHEGRTGASTINIVSRRERGHDATEEEIKAIYQAK-TEEFN-----KCPKAERMPG--AL 114

Query: 63  NLLLSMPQRKI---IFTNADQKHAMEVLG-RLGLEDCFEGIICFETINPRLQPADNTDGI 118
            +L  +    +   + T + Q   ++ L            ++    +             
Sbjct: 115 EVLTKIKSEGLTPMVVTGSGQTSLLDRLNHNFPGIFQANLMVTAFDV------------- 161

Query: 119 ENNSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSS 178
           +            KP+ E    A++     P + +  +++   + +  AAG+ T+ V + 
Sbjct: 162 KYG----------KPNPEPYLMALKKGGFKPNEALVIENAPLGVQAGVAAGIFTIAVNTG 211

Query: 179 VPVPP------ADHALNSIHNIKEAIPEIWEGEGEQLEQ 211
                      A+   +S+        + WE     L+Q
Sbjct: 212 PLHDNVLLNEGANLLFHSM----PDFNKNWETLQSALKQ 246

>2hcf_A Hydrolase, haloacid dehalogenase-like family; NP_662590.1, ST genomics, PSI-2, protein structure initiative; 1.80A {Chlorobaculum tepidum} SCOP: c.108.1.6 Length = 234

 Score = 39.6 bits (93), Expect = 3e-04
 Identities = 14/104 (13%), Positives = 30/104 (28%), Gaps = 20/104 (19%)

Query: 74  IFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCKP 133
           + T   +      L   G++  F      +    R +                       
Sbjct: 115 LLTGNFEASGRHKLKLPGIDHYFPFGAFADDALDRNELPH-------------------I 155

Query: 134 SLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGS 177
           +LE     +  AN  P + +   D+  +I  A+     ++ V +
Sbjct: 156 ALERAR-RMTGANYSPSQIVIIGDTEHDIRCARELDARSIAVAT 198

>3l5k_A Protein GS1, haloacid dehalogenase-like hydrolase domain- containing protein 1A; HDHD1A, haloacid dehalogenase-like hydrolase domain containing 1A; 2.00A {Homo sapiens} Length = 250

 Score = 39.6 bits (93), Expect = 3e-04
 Identities = 29/185 (15%), Positives = 62/185 (33%), Gaps = 36/185 (19%)

Query: 30  LKAVGYEFDNDEFHAFVHGKLP--YEKLKPDPVLRNLLLSMPQRKI---IFTNADQKHAM 84
           +  +      +E       KL   +      P    L++ + +  I   + T++      
Sbjct: 84  IDVLQLPMSKEELVEESQTKLKEVFPTAALMPGAEKLIIHLRKHGIPFALATSSRSASFD 143

Query: 85  EVLGRL-GLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCKPSLEAIETAIR 143
               R       F  I+            D+ + +++           KP  +      +
Sbjct: 144 MKTSRHKEFFSLFSHIVL----------GDDPE-VQHG----------KPDPDIFLACAK 182

Query: 144 IANVDP--KKTIFFDDSARNIASAKAAGLHTVIVGSSVPVPP----ADHALNSIHNIKEA 197
             +  P  +K + F+D+   + +A AAG+  V+V            A   LNS+ + +  
Sbjct: 183 RFSPPPAMEKCLVFEDAPNGVEAALAAGMQVVMVPDGNLSRDLTTKATLVLNSLQDFQ-- 240

Query: 198 IPEIW 202
            PE++
Sbjct: 241 -PELF 244

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	224
3kbb_A	216	Phosphorylated carbohydrates phosphatase TM_1254;	99.89
3nuq_A	282	Protein SSM1, putative nucleotide phosphatase; sup	99.87
2ah5_A	210	COG0546: predicted phosphatases; MCSG, structural	99.85
2pib_A	216	Phosphorylated carbohydrates phosphatase TM_1254;	99.85
4gib_A	250	Beta-phosphoglucomutase; rossmann fold, HAD-like,	99.85
3ib6_A	189	Uncharacterized protein; structural genomics, unkn	99.85
3dv9_A	247	Beta-phosphoglucomutase; structural genomics, APC6	99.85
3ed5_A	238	YFNB; APC60080, bacillus subtilis subsp. subtilis	99.83
3qxg_A	243	Inorganic pyrophosphatase; hydrolase, magnesium bi	99.83
3umb_A	233	Dehalogenase-like hydrolase; 2.20A {Ralstonia sola	99.83
2gfh_A	260	Haloacid dehalogenase-like hydrolase domain conta;	99.83
3um9_A	230	Haloacid dehalogenase, type II; haloacid dehalogen	99.83
3s6j_A	233	Hydrolase, haloacid dehalogenase-like family; stru	99.82
3mc1_A	226	Predicted phosphatase, HAD family; PSI2, NYSGXRC,	99.82
3kzx_A	231	HAD-superfamily hydrolase, subfamily IA, variant;	99.82
2hi0_A	240	Putative phosphoglycolate phosphatase; YP_619066.1	99.82
2nyv_A	222	Pgpase, PGP, phosphoglycolate phosphatase; structu	99.81
3l8h_A	179	Putative haloacid dehalogenase-like hydrolase; HAD	99.81
4g9b_A	243	Beta-PGM, beta-phosphoglucomutase; HAD, putative p	99.81
3u26_A	234	PF00702 domain protein; structural genomics, PSI-b	99.81
3e58_A	214	Putative beta-phosphoglucomutase; structu genomics	99.81
3smv_A	240	S-(-)-azetidine-2-carboxylate hydrolase; haloacid	99.81
3k1z_A	263	Haloacid dehalogenase-like hydrolase domain-conta	99.81
2no4_A	240	(S)-2-haloacid dehalogenase IVA; HAD superfamily,	99.81
1qq5_A	253	Protein (L-2-haloacid dehalogenase); hydrolase; 1.	99.8
4ex6_A	237	ALNB; modified rossman fold, phosphatase, magnesiu	99.8
1zrn_A	232	L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseud	99.8
2hdo_A	209	Phosphoglycolate phosphatase; NP_784602.1, structu	99.8
4eek_A	259	Beta-phosphoglucomutase-related protein; hydrolase	99.8
3sd7_A	240	Putative phosphatase; structural genomics, haloaci	99.8
3qnm_A	240	Haloacid dehalogenase-like hydrolase; structural g	99.8
2hoq_A	241	Putative HAD-hydrolase PH1655; haloacid dehalogena	99.8
3nas_A	233	Beta-PGM, beta-phosphoglucomutase; PSI, structural	99.79
2w43_A	201	Hypothetical 2-haloalkanoic acid dehalogenase; hyd	99.79
3l5k_A	250	Protein GS1, haloacid dehalogenase-like hydrolase	99.79
2oda_A	196	Hypothetical protein pspto_2114; haloacid dehaloge	99.79
3iru_A	277	Phoshonoacetaldehyde hydrolase like protein; phosp	99.78
3m9l_A	205	Hydrolase, haloacid dehalogenase-like family; HAD	99.78
3umg_A	254	Haloacid dehalogenase; defluorinase, hydrolase; 2.	99.78
2om6_A	235	Probable phosphoserine phosphatase; rossmann fold,	99.77
1yns_A	261	E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo	99.77
3umc_A	254	Haloacid dehalogenase; HY; 2.15A {Pseudomonas aeru	99.77
3vay_A	230	HAD-superfamily hydrolase; rossmann fold, haloacid	99.77
2fdr_A	229	Conserved hypothetical protein; SAD, structural ge	99.76
2hsz_A	243	Novel predicted phosphatase; structural genomics,	99.76
2zg6_A	220	Putative uncharacterized protein ST2620, probable	99.76
1qyi_A	384	ZR25, hypothetical protein; structural genomics, P	99.76
2hcf_A	234	Hydrolase, haloacid dehalogenase-like family; NP_6	99.75
2gmw_A	211	D,D-heptose 1,7-bisphosphate phosphatase; Zn-bindi	99.74
3ddh_A	234	Putative haloacid dehalogenase-like family hydrol;	99.74
2pke_A	251	Haloacid delahogenase-like family hydrolase; NP_63	99.73
2o2x_A	218	Hypothetical protein; structural genomics, joint c	99.73
2go7_A	207	Hydrolase, haloacid dehalogenase-like family; stru	99.73
2g80_A	253	Protein UTR4; YEL038W, UTR4 protein (unknown trans	99.72
3d6j_A	225	Putative haloacid dehalogenase-like hydrolase; str	99.71
2pr7_A	137	Haloacid dehalogenase/epoxide hydrolase family; NP	99.71
4dcc_A	229	Putative haloacid dehalogenase-like hydrolase; mag	99.71
1swv_A	267	Phosphonoacetaldehyde hydrolase; HAD enzyme superf	99.71
1te2_A	226	Putative phosphatase; structural genomics, phospha	99.7
3cnh_A	200	Hydrolase family protein; NP_295428.1, predicted h	99.68
2wf7_A	221	Beta-PGM, beta-phosphoglucomutase; transition stat	99.66
2i6x_A	211	Hydrolase, haloacid dehalogenase-like family; HAD	99.66
2fpr_A	176	Histidine biosynthesis bifunctional protein HISB;	99.65
2b0c_A	206	Putative phosphatase; alpha-D-glucose-1-phosphate,	99.62
2qlt_A	275	(DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, sac	99.61
3m1y_A	217	Phosphoserine phosphatase (SERB); NYSGXRC, PSI II,	99.6
2wm8_A	187	MDP-1, magnesium-dependent phosphatase 1; haloacid	99.6
2p11_A	231	Hypothetical protein; putative haloacid dehalogena	99.59
1rku_A	206	Homoserine kinase; phosphoserine phosphatase, phos	99.58
2ho4_A	259	Haloacid dehalogenase-like hydrolase domain contai	99.58
3i28_A	555	Epoxide hydrolase 2; aromatic hydrocarbons catabol	99.56
1nnl_A	225	L-3-phosphoserine phosphatase; PSP, HPSP, phospho-	99.55
2fea_A	236	2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate	99.54
2fi1_A	190	Hydrolase, haloacid dehalogenase-like family; stru	99.54
2p9j_A	162	Hypothetical protein AQ2171; secsg, riken, PSI, st	99.54
2hx1_A	284	Predicted sugar phosphatases of the HAD superfamil	99.53
1yv9_A	264	Hydrolase, haloacid dehalogenase family; hypotheti	99.53
1zjj_A	263	Hypothetical protein PH1952; alpha/beta hydrolase	99.52
2oyc_A	306	PLP phosphatase, pyridoxal phosphate phosphatase;	99.49
4eze_A	317	Haloacid dehalogenase-like hydrolase; magnesium bi	99.49
1vjr_A	271	4-nitrophenylphosphatase; TM1742, structural genom	99.48
3e8m_A	164	Acylneuraminate cytidylyltransferase; 2-keto-3-deo	99.45
4ap9_A	201	Phosphoserine phosphatase; hydrolase, haloacid deh	99.44
3kd3_A	219	Phosphoserine phosphohydrolase-like protein; csgid	99.44
3n28_A	335	Phosphoserine phosphatase; HAD family hydrolase, s	99.42
1ltq_A	301	Polynucleotide kinase; phosphatase, alpha/beta, P-	99.42
2r8e_A	188	3-deoxy-D-manno-octulosonate 8-phosphate phosphata	99.4
3p96_A	415	Phosphoserine phosphatase SERB; ssgcid, structural	99.39
2c4n_A	250	Protein NAGD; nucleotide phosphatase, HAD superfam	99.38
1l7m_A	211	Phosphoserine phosphatase; rossmann fold, four-hel	99.37
3zvl_A	416	Bifunctional polynucleotide phosphatase/kinase; hy	99.36
3n1u_A	191	Hydrolase, HAD superfamily, subfamily III A; struc	99.33
2b82_A	211	APHA, class B acid phosphatase; DDDD acid phosphat	99.32
2x4d_A	271	HLHPP, phospholysine phosphohistidine inorganic py	99.31
3a1c_A	287	Probable copper-exporting P-type ATPase A; ATP-bin	99.3
1k1e_A	180	Deoxy-D-mannose-octulosonate 8-phosphate phosphat;	99.29
3ij5_A	211	3-deoxy-D-manno-octulosonate 8-phosphate phosphat;	99.28
3mn1_A	189	Probable YRBI family phosphatase; structural genom	99.28
3mmz_A	176	Putative HAD family hydrolase; structural genomics	99.26
3n07_A	195	3-deoxy-D-manno-octulosonate 8-phosphate phosphat;	99.24
3fvv_A	232	Uncharacterized protein; unknown function, structu	99.23
3epr_A	264	Hydrolase, haloacid dehalogenase-like family; stru	99.18
3skx_A	280	Copper-exporting P-type ATPase B; P1B-ATPase, ATP	99.17
3pdw_A	266	Uncharacterized hydrolase YUTF; structural genomic	99.16
2i7d_A	193	5'(3')-deoxyribonucleotidase, cytosolic type; hydr	99.14
1q92_A	197	5(3)-deoxyribonucleotidase; alpha-beta rossman fol	99.12
3nvb_A	387	Uncharacterized protein; protein FKBH, protein fkb	99.12
2yj3_A	263	Copper-transporting ATPase; hydrolase, P-type ATPa	98.72
3qgm_A	268	P-nitrophenyl phosphatase (PHO2); structural genom	99.09
3bwv_A	180	Putative 5'(3')-deoxyribonucleotidase; NP_764060.1	99.08
3ewi_A	168	N-acylneuraminate cytidylyltransferase; beta barre	99.05
2hhl_A	195	CTD small phosphatase-like protein; CTD phosphatas	99.0
3gyg_A	289	NTD biosynthesis operon putative hydrolase NTDB; P	98.96
2ght_A	181	Carboxy-terminal domain RNA polymerase II polypept	98.92
3kc2_A	352	Uncharacterized protein YKR070W; HAD-like, mitocho	98.8
1wr8_A	231	Phosphoglycolate phosphatase; alpha / beta core do	98.78
2jc9_A	555	Cytosolic purine 5'-nucleotidase; cytosolic 5-prim	98.67
1rlm_A	271	Phosphatase; HAD family, rossman fold, hydrolase;	98.63
2i33_A	258	Acid phosphatase; HAD superfamily, hydrolase; 1.57	98.6
2rbk_A	261	Putative uncharacterized protein; HAD-like phospha	98.57
4dw8_A	279	Haloacid dehalogenase-like hydrolase; HAD, putativ	98.51
3dnp_A	290	Stress response protein YHAX; structural PSI-2, pr	98.39
1l6r_A	227	Hypothetical protein TA0175; structural genomics,	98.29
3mpo_A	279	Predicted hydrolase of the HAD superfamily; SGX, P	98.25
3fzq_A	274	Putative hydrolase; YP_001086940.1, putative haloa	98.23
3l7y_A	304	Putative uncharacterized protein SMU.1108C; hydrol	98.22
3pct_A	260	Class C acid phosphatase; hydrolase, outer membran	98.2
3ocu_A	262	Lipoprotein E; hydrolase, outer membrane; HET: NMN	98.12
3dao_A	283	Putative phosphatse; structural genomics, joint ce	98.07
3j08_A	645	COPA, copper-exporting P-type ATPase A; copper tra	97.94
1rkq_A	282	Hypothetical protein YIDA; two domain structure wi	97.83
3r4c_A	268	Hydrolase, haloacid dehalogenase-like hydrolase; h	97.79
3pgv_A	285	Haloacid dehalogenase-like hydrolase; structural g	97.78
2pq0_A	258	Hypothetical conserved protein GK1056; hyopthetica	97.75
1nrw_A	288	Hypothetical protein, haloacid dehalogenase-like h	97.75
4g63_A	470	Cytosolic IMP-GMP specific 5'-nucleotidase; struct	97.73
3j09_A	723	COPA, copper-exporting P-type ATPase A; copper tra	97.67
1nf2_A	268	Phosphatase; structural proteomics, HAD NEW fold,	97.6
2b30_A	301	Pvivax hypothetical protein; SGPP, structural geno	97.52
3zx4_A	259	MPGP, mannosyl-3-phosphoglycerate phosphatase; hyd	97.5
3ar4_A	995	Sarcoplasmic/endoplasmic reticulum calcium ATPase;	97.49
3rfu_A	736	Copper efflux ATPase; alpha helical, CPC, CXXC, AT	97.44
3qle_A	204	TIM50P; chaperone, mitochondrion, preprotein trans	97.39
4fe3_A	297	Cytosolic 5'-nucleotidase 3; substrate complex, HA	97.36
1y8a_A	332	Hypothetical protein AF1437; structural genomics,	97.33
1s2o_A	244	SPP, sucrose-phosphatase; phosphohydrolase, HAD su	97.15
1xvi_A	275	MPGP, YEDP, putative mannosyl-3-phosphoglycerate p	96.72
3ef0_A	372	RNA polymerase II subunit A C-terminal domain phos	96.34
2zos_A	249	MPGP, mannosyl-3-phosphoglycerate phosphatase; hal	96.31
2zxe_A	1028	Na, K-ATPase alpha subunit; membrane protein, ION	96.3
4gxt_A	385	A conserved functionally unknown protein; structur	96.13
1mhs_A	920	Proton pump, plasma membrane ATPase; ION transport	95.86
3ixz_A	1034	Potassium-transporting ATPase alpha; ION pump, H+,	95.45
1u02_A	239	Trehalose-6-phosphate phosphatase related protein;	94.98
3shq_A	320	UBLCP1; phosphatase, hydrolase; 1.96A {Drosophila	94.63
3b8c_A	885	ATPase 2, plasma membrane-type; P-type ATPase, pro	94.51
3geb_A	274	EYES absent homolog 2; hydrolase, activator, alter	94.1
3ef1_A	442	RNA polymerase II subunit A C-terminal domain phos	93.59
3kc2_A	352	Uncharacterized protein YKR070W; HAD-like, mitocho	88.24
2fue_A	262	PMM 1, PMMH-22, phosphomannomutase 1; enzyme-produ	86.83
1zjj_A	263	Hypothetical protein PH1952; alpha/beta hydrolase	83.51

>3kbb_A Phosphorylated carbohydrates phosphatase TM_1254; hydrolase, arbohydrate metabolism, COBA magnesium, manganese, metal-binding, nickel; HET: MSE GOL; 1.74A {Thermotoga maritima MSB8}

Probab=99.89  E-value=5.5e-23  Score=168.44  Aligned_cols=125  Identities=29%  Similarity=0.381  Sum_probs=110.1

Q ss_pred             CCCCChhHHHHHhcCC---CCeEEEeCCChHHHHHHHHHcCCccccceeEeeccCCCCCCCCCCCCCcccccCCcccccc
Q 027403           54 KLKPDPVLRNLLLSMP---QRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRIL  130 (224)
Q Consensus        54 ~~~~~~g~~~~L~~l~---~~~~I~Tn~~~~~~~~~l~~lgl~~~fd~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  130 (224)
                      ..+++||+.++|+.|+   ++++|+||+++..+...++++|+.++||.++++++++..                      
T Consensus        82 ~~~~~pg~~~~l~~L~~~g~~~~i~tn~~~~~~~~~l~~~~l~~~fd~~~~~~~~~~~----------------------  139 (216)
T 3kbb_A           82 LLKENPGVREALEFVKSKRIKLALATSTPQREALERLRRLDLEKYFDVMVFGDQVKNG----------------------  139 (216)
T ss_dssp             HCCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGCSEEECGGGSSSC----------------------
T ss_pred             hcccCccHHHHHHHHHHcCCCcccccCCcHHHHHHHHHhcCCCccccccccccccCCC----------------------
Confidence            4678999999999885   789999999999999999999999999999999998875                      


Q ss_pred             CCCCHHHHHHHHHHhCCCCCcEEEEeCChhcHHHHHHcCCeEEE-ECCCCC------CCCCceEeCCHhHHHHHHHHHH
Q 027403          131 CKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVI-VGSSVP------VPPADHALNSIHNIKEAIPEIW  202 (224)
Q Consensus       131 ~KP~~~~~~~al~~~~~~~~~~l~VgDs~~Di~~A~~~G~~~v~-v~~~~~------~~~~d~~i~~~~dl~~~i~~~~  202 (224)
                       ||+|++|..+++++|++|++|+||||+.+|+.+|+++|+++|+ +.++..      ..+++ .+.+..++.+.|.+++
T Consensus       140 -KP~p~~~~~a~~~lg~~p~e~l~VgDs~~Di~aA~~aG~~~i~~v~~g~~~~~~l~~~~~~-~i~~~~eli~~l~eLL  216 (216)
T 3kbb_A          140 -KPDPEIYLLVLERLNVVPEKVVVFEDSKSGVEAAKSAGIERIYGVVHSLNDGKALLEAGAV-ALVKPEEILNVLKEVL  216 (216)
T ss_dssp             -TTSTHHHHHHHHHHTCCGGGEEEEECSHHHHHHHHHTTCCCEEEECCSSSCCHHHHHTTCS-EEECGGGHHHHHHHHC
T ss_pred             -cccHHHHHHHHHhhCCCccceEEEecCHHHHHHHHHcCCcEEEEecCCCCCHHHHHhCCCc-EECCHHHHHHHHHHHC
Confidence             9999999999999999999999999999999999999999996 777654      22344 4447889988888764

>3nuq_A Protein SSM1, putative nucleotide phosphatase; suppresses the 6-AU sensitivity of transcription elongation II; 1.70A {Saccharomyces cerevisiae} PDB: 3onn_A 3opx_A*

Probab=99.87  E-value=1.3e-21  Score=167.22  Aligned_cols=180  Identities=26%  Similarity=0.497  Sum_probs=150.9

Q ss_pred             ccCCCCcccHHHHHHHHHHHhCccHHHHHHccCCCCHHHHHHHHhccCC-CCCCCCChhHHHHHhcCC---C--CeEEEe
Q 027403            3 QHLHIDESEVPRMCLELYREHGTTMAGLKAVGYEFDNDEFHAFVHGKLP-YEKLKPDPVLRNLLLSMP---Q--RKIIFT   76 (224)
Q Consensus         3 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~g~~~~L~~l~---~--~~~I~T   76 (224)
                      +.+|++...+..+...++..++.+..++.. ..+++.+++...+..... ...+.++||+.++|+.|+   +  +++|+|
T Consensus        89 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~L~~L~~~g~~~~l~i~T  167 (282)
T 3nuq_A           89 THLKLSPEDAHVLNNSYYKEYGLAIRGLVM-FHKVNALEYNRLVDDSLPLQDILKPDIPLRNMLLRLRQSGKIDKLWLFT  167 (282)
T ss_dssp             HCTTSCHHHHHHHHHHHHHHTHHHHHHHHH-TTSSCHHHHHHHHTTTSCGGGTCCCCHHHHHHHHHHHHSSSCSEEEEEC
T ss_pred             HhcCCCHHHHHHHHHHHHHHHhhhHHHHHH-HcCCCHHHHHHHHhhhhhhhhccCcChhHHHHHHHHHhCCCCceEEEEE
Confidence            356888888888888888888888877765 356788888888776543 235789999999999996   5  888999


Q ss_pred             CCChHHHHHHHHHcCCccccceeEeeccCCCCCCCCCCCCCcccccCCccccccCCCCHHHHHHHHHHhCCCC-CcEEEE
Q 027403           77 NADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCKPSLEAIETAIRIANVDP-KKTIFF  155 (224)
Q Consensus        77 n~~~~~~~~~l~~lgl~~~fd~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~~~~~~~al~~~~~~~-~~~l~V  155 (224)
                      |++...+...++.+|+.++|+.++++++....                   ...+||++.+|..+++++|++| ++|++|
T Consensus       168 n~~~~~~~~~l~~~gl~~~fd~v~~~~~~~~~-------------------~~~~Kp~~~~~~~~~~~lgi~~~~~~i~v  228 (282)
T 3nuq_A          168 NAYKNHAIRCLRLLGIADLFDGLTYCDYSRTD-------------------TLVCKPHVKAFEKAMKESGLARYENAYFI  228 (282)
T ss_dssp             SSCHHHHHHHHHHHTCTTSCSEEECCCCSSCS-------------------SCCCTTSHHHHHHHHHHHTCCCGGGEEEE
T ss_pred             CCChHHHHHHHHhCCcccccceEEEeccCCCc-------------------ccCCCcCHHHHHHHHHHcCCCCcccEEEE
Confidence            99999999999999999999999988765321                   1125999999999999999999 999999


Q ss_pred             eCChhcHHHHHHcCC-eEEEECCCCC------CCCCceEeCCHhHHHHHHHHHH
Q 027403          156 DDSARNIASAKAAGL-HTVIVGSSVP------VPPADHALNSIHNIKEAIPEIW  202 (224)
Q Consensus       156 gDs~~Di~~A~~~G~-~~v~v~~~~~------~~~~d~~i~~~~dl~~~i~~~~  202 (224)
                      ||+.+|+.+|+++|+ .++++..+..      .+.++++++++.+|.++++++|
T Consensus       229 GD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~~~~ad~vi~sl~el~~~l~~lf  282 (282)
T 3nuq_A          229 DDSGKNIETGIKLGMKTCIHLVENEVNEILGQTPEGAIVISDILELPHVVSDLF  282 (282)
T ss_dssp             ESCHHHHHHHHHHTCSEEEEECSCCC----CCCCTTCEEESSGGGGGGTSGGGC
T ss_pred             cCCHHHHHHHHHCCCeEEEEEcCCccccccccCCCCCEEeCCHHHHHHHhhhhC
Confidence            999999999999999 7788877643      4578999999999999988765

>2ah5_A COG0546: predicted phosphatases; MCSG, structural genomics, hydrola haloacid dehalogenase-like, PSI; 1.74A {Streptococcus pneumoniae} SCOP: c.108.1.6

Probab=99.85  E-value=4.4e-21  Score=157.62  Aligned_cols=120  Identities=16%  Similarity=0.231  Sum_probs=107.7

Q ss_pred             CCCCChhHHHHHhcCC--CCeEEEeCCChHHHHHHHHHcCCccccceeEeeccCCCCCCCCCCCCCcccccCCccccccC
Q 027403           54 KLKPDPVLRNLLLSMP--QRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILC  131 (224)
Q Consensus        54 ~~~~~~g~~~~L~~l~--~~~~I~Tn~~~~~~~~~l~~lgl~~~fd~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  131 (224)
                      ...++||+.++|+.|+  ++++|+||+++..+...++++|+.++|+.+++++  ..                       +
T Consensus        82 ~~~~~~g~~~~l~~L~~~~~l~i~T~~~~~~~~~~l~~~gl~~~f~~i~~~~--~~-----------------------~  136 (210)
T 2ah5_A           82 EAQLFPQIIDLLEELSSSYPLYITTTKDTSTAQDMAKNLEIHHFFDGIYGSS--PE-----------------------A  136 (210)
T ss_dssp             SCEECTTHHHHHHHHHTTSCEEEEEEEEHHHHHHHHHHTTCGGGCSEEEEEC--SS-----------------------C
T ss_pred             CCCCCCCHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHhcCchhheeeeecCC--CC-----------------------C
Confidence            3678999999998774  7889999999999999999999999999999888  44                       3


Q ss_pred             CCCHHHHHHHHHHhCCCCCcEEEEeCChhcHHHHHHcCCeEEEECCCCC------CCCCceEeCCHhHHHHHH
Q 027403          132 KPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP------VPPADHALNSIHNIKEAI  198 (224)
Q Consensus       132 KP~~~~~~~al~~~~~~~~~~l~VgDs~~Di~~A~~~G~~~v~v~~~~~------~~~~d~~i~~~~dl~~~i  198 (224)
                      ||+|.+|..+++++|++|++|++||||.+|+.+|+++|++++++.++..      ...++++++++.+|.+++
T Consensus       137 Kp~p~~~~~~~~~lg~~p~~~~~vgDs~~Di~~a~~aG~~~i~v~~~~~~~~~l~~~~a~~v~~~~~el~~~l  209 (210)
T 2ah5_A          137 PHKADVIHQALQTHQLAPEQAIIIGDTKFDMLGARETGIQKLAITWGFGEQADLLNYQPDYIAHKPLEVLAYF  209 (210)
T ss_dssp             CSHHHHHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEESSSSSCHHHHHTTCCSEEESSTTHHHHHT
T ss_pred             CCChHHHHHHHHHcCCCcccEEEECCCHHHHHHHHHCCCcEEEEcCCCCCHHHHHhCCCCEEECCHHHHHHHh
Confidence            9999999999999999999999999999999999999999999998754      246899999999997653

>4gib_A Beta-phosphoglucomutase; rossmann fold, HAD-like, structural genomics, center for structural genomics of infectious DISE csgid, isomerase; 2.27A {Clostridium difficile}

Probab=99.85  E-value=5.7e-21  Score=161.61  Aligned_cols=125  Identities=24%  Similarity=0.313  Sum_probs=109.1

Q ss_pred             CCCCChhHHHHHhcCC---CCeEEEeCCChHHHHHHHHHcCCccccceeEeeccCCCCCCCCCCCCCcccccCCcccccc
Q 027403           54 KLKPDPVLRNLLLSMP---QRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRIL  130 (224)
Q Consensus        54 ~~~~~~g~~~~L~~l~---~~~~I~Tn~~~~~~~~~l~~lgl~~~fd~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  130 (224)
                      ...++||+.++|+.|+   .++++.|++  ..+...++++|+.++||.++++++++..                      
T Consensus       114 ~~~~~p~~~~ll~~Lk~~g~~i~i~~~~--~~~~~~L~~~gl~~~Fd~i~~~~~~~~~----------------------  169 (250)
T 4gib_A          114 SNDILPGIESLLIDVKSNNIKIGLSSAS--KNAINVLNHLGISDKFDFIADAGKCKNN----------------------  169 (250)
T ss_dssp             GGGSCTTHHHHHHHHHHTTCEEEECCSC--TTHHHHHHHHTCGGGCSEECCGGGCCSC----------------------
T ss_pred             ccccchhHHHHHHHHHhccccccccccc--chhhhHhhhcccccccceeecccccCCC----------------------
Confidence            4568999999999997   344455444  4466789999999999999999998875                      


Q ss_pred             CCCCHHHHHHHHHHhCCCCCcEEEEeCChhcHHHHHHcCCeEEEECCCCCCCCCceEeCCHhHH-HHHHHHHHh
Q 027403          131 CKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVPVPPADHALNSIHNI-KEAIPEIWE  203 (224)
Q Consensus       131 ~KP~~~~~~~al~~~~~~~~~~l~VgDs~~Di~~A~~~G~~~v~v~~~~~~~~~d~~i~~~~dl-~~~i~~~~~  203 (224)
                       ||+|++|..+++++|++|++|+||||+.+|+++|+++|+++|+|.+......+|++++++.|| .+.|.+.|.
T Consensus       170 -KP~p~~~~~a~~~lg~~p~e~l~VGDs~~Di~aA~~aG~~~i~v~~~~~~~~ad~vi~~l~eL~~~~i~~~~n  242 (250)
T 4gib_A          170 -KPHPEIFLMSAKGLNVNPQNCIGIEDASAGIDAINSANMFSVGVGNYENLKKANLVVDSTNQLKFEYIQEKYN  242 (250)
T ss_dssp             -TTSSHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHHTTCEEEEESCTTTTTTSSEEESSGGGCCHHHHHHHHH
T ss_pred             -CCcHHHHHHHHHHhCCChHHeEEECCCHHHHHHHHHcCCEEEEECChhHhccCCEEECChHhCCHHHHHHHHH
Confidence             999999999999999999999999999999999999999999998877677899999999999 577777764

>3ib6_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.20A {Listeria monocytogenes}

Probab=99.85  E-value=1.4e-20  Score=153.54  Aligned_cols=124  Identities=15%  Similarity=0.271  Sum_probs=111.0

Q ss_pred             CCCCCChhHHHHHhcCC---CCeEEEeCCCh---HHHHHHHHHcCCccccceeEeeccC----CCCCCCCCCCCCccccc
Q 027403           53 EKLKPDPVLRNLLLSMP---QRKIIFTNADQ---KHAMEVLGRLGLEDCFEGIICFETI----NPRLQPADNTDGIENNS  122 (224)
Q Consensus        53 ~~~~~~~g~~~~L~~l~---~~~~I~Tn~~~---~~~~~~l~~lgl~~~fd~ii~~~~~----~~~~~~~~~~~~~~~~~  122 (224)
                      ..+.++||+.++|+.|+   ++++|+||++.   ..+...++++|+..+|+.++++++.    ..               
T Consensus        31 ~~~~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~~~~l~~~gl~~~fd~i~~~~~~~~~~~~---------------   95 (189)
T 3ib6_A           31 PEVVLRKNAKETLEKVKQLGFKQAILSNTATSDTEVIKRVLTNFGIIDYFDFIYASNSELQPGKM---------------   95 (189)
T ss_dssp             TTCCBCTTHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHTTCGGGEEEEEECCTTSSTTCC---------------
T ss_pred             CCceeCcCHHHHHHHHHHCCCEEEEEECCCccchHHHHHHHHhcCchhheEEEEEccccccccCC---------------
Confidence            45789999999999996   78899999987   8899999999999999999999875    33               


Q ss_pred             CCccccccCCCCHHHHHHHHHHhCCCCCcEEEEeCC-hhcHHHHHHcCCeEEEECCCCC--------CCCCceEeC--CH
Q 027403          123 FSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDS-ARNIASAKAAGLHTVIVGSSVP--------VPPADHALN--SI  191 (224)
Q Consensus       123 ~~~~~~~~~KP~~~~~~~al~~~~~~~~~~l~VgDs-~~Di~~A~~~G~~~v~v~~~~~--------~~~~d~~i~--~~  191 (224)
                              +||+|.+|..+++++|++|++|+||||+ .+|+.+|+++|+.++++.++..        ...++++++  ++
T Consensus        96 --------~KP~p~~~~~~~~~~~~~~~~~l~VGD~~~~Di~~A~~aG~~~i~v~~~~~~~~~~~~~~~~~~~v~~~~~l  167 (189)
T 3ib6_A           96 --------EKPDKTIFDFTLNALQIDKTEAVMVGNTFESDIIGANRAGIHAIWLQNPEVCLQDERLPLVAPPFVIPVWDL  167 (189)
T ss_dssp             --------CTTSHHHHHHHHHHHTCCGGGEEEEESBTTTTHHHHHHTTCEEEEECCTTTCBCSSCCCBCSSSCEEEESSG
T ss_pred             --------CCcCHHHHHHHHHHcCCCcccEEEECCCcHHHHHHHHHCCCeEEEECCccccccccccccCCCcceeccccH
Confidence                    3999999999999999999999999999 6999999999999999988753        127899999  99


Q ss_pred             hHHHHHHH
Q 027403          192 HNIKEAIP  199 (224)
Q Consensus       192 ~dl~~~i~  199 (224)
                      .+|.+++.
T Consensus       168 ~~l~~~l~  175 (189)
T 3ib6_A          168 ADVPEALL  175 (189)
T ss_dssp             GGHHHHHH
T ss_pred             HhHHHHHH
Confidence            99998653

>3dv9_A Beta-phosphoglucomutase; structural genomics, APC60149, PSI- protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.72A {Bacteroides vulgatus}

Probab=99.85  E-value=3.5e-20  Score=153.29  Aligned_cols=149  Identities=15%  Similarity=0.237  Sum_probs=123.2

Q ss_pred             ccCCCCHHHHHHHHhcc----CCCCCCCCChhHHHHHhcCC---CCeEEEeCCChHHHHHHHHHcCCcccc--ceeEeec
Q 027403           33 VGYEFDNDEFHAFVHGK----LPYEKLKPDPVLRNLLLSMP---QRKIIFTNADQKHAMEVLGRLGLEDCF--EGIICFE  103 (224)
Q Consensus        33 ~~~~~~~~~~~~~~~~~----~~~~~~~~~~g~~~~L~~l~---~~~~I~Tn~~~~~~~~~l~~lgl~~~f--d~ii~~~  103 (224)
                      ++...+.+++...+...    .......++||+.++|+.++   .+++|+||++...+...+++ |+.++|  +.+++++
T Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~-~l~~~f~~~~~~~~~  159 (247)
T 3dv9_A           81 RGHDATEEEIKAIYQAKTEEFNKCPKAERMPGALEVLTKIKSEGLTPMVVTGSGQTSLLDRLNH-NFPGIFQANLMVTAF  159 (247)
T ss_dssp             HSSCCCHHHHHHHHHHHHHHHTTSCCCCBCTTHHHHHHHHHHTTCEEEEECSCC---CHHHHHH-HSTTTCCGGGEECGG
T ss_pred             cCCCCCHHHHHHHHHHHHHHHHhcccCCCCCCHHHHHHHHHHcCCcEEEEcCCchHHHHHHHHh-hHHHhcCCCeEEecc
Confidence            45555665554433221    11245789999999999986   67889999999888889999 999999  8899999


Q ss_pred             cCCCCCCCCCCCCCcccccCCccccccCCCCHHHHHHHHHHhCCCCCcEEEEeCChhcHHHHHHcCCeEEEECCCCC---
Q 027403          104 TINPRLQPADNTDGIENNSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP---  180 (224)
Q Consensus       104 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~~~~~~~al~~~~~~~~~~l~VgDs~~Di~~A~~~G~~~v~v~~~~~---  180 (224)
                      ++...                       ||+|.+|..+++++|++|++|++|||+.+|+.+|+++|+.++++.++..   
T Consensus       160 ~~~~~-----------------------kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~v~~~~~~~~  216 (247)
T 3dv9_A          160 DVKYG-----------------------KPNPEPYLMALKKGGFKPNEALVIENAPLGVQAGVAAGIFTIAVNTGPLHDN  216 (247)
T ss_dssp             GCSSC-----------------------TTSSHHHHHHHHHHTCCGGGEEEEECSHHHHHHHHHTTSEEEEECCSSSCHH
T ss_pred             cCCCC-----------------------CCCCHHHHHHHHHcCCChhheEEEeCCHHHHHHHHHCCCeEEEEcCCCCCHH
Confidence            88764                       9999999999999999999999999999999999999999999998864   


Q ss_pred             ---CCCCceEeCCHhHHHHHHHHHHhhc
Q 027403          181 ---VPPADHALNSIHNIKEAIPEIWEGE  205 (224)
Q Consensus       181 ---~~~~d~~i~~~~dl~~~i~~~~~~~  205 (224)
                         ...++++++++.+|.++|.++++..
T Consensus       217 ~l~~~~ad~v~~~~~el~~~l~~~~~~~  244 (247)
T 3dv9_A          217 VLLNEGANLLFHSMPDFNKNWETLQSAL  244 (247)
T ss_dssp             HHHTTTCSEEESSHHHHHHHHHHHHHHH
T ss_pred             HHHhcCCCEEECCHHHHHHHHHHHHHHh
Confidence               2479999999999999999988753

>3ed5_A YFNB; APC60080, bacillus subtilis subsp. subtilis STR. 168, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.72A {Bacillus subtilis} PDB: 3i76_A

Probab=99.83  E-value=1.3e-19  Score=148.75  Aligned_cols=145  Identities=19%  Similarity=0.175  Sum_probs=123.6

Q ss_pred             HccCCCCHHHHHHHHhccCCCCCCCCChhHHHHHhcCC--CCeEEEeCCChHHHHHHHHHcCCccccceeEeeccCCCCC
Q 027403           32 AVGYEFDNDEFHAFVHGKLPYEKLKPDPVLRNLLLSMP--QRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRL  109 (224)
Q Consensus        32 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~L~~l~--~~~~I~Tn~~~~~~~~~l~~lgl~~~fd~ii~~~~~~~~~  109 (224)
                      ..+...+...+...+..... ....++||+.++|+.++  ++++|+||++...+...++++|+.++|+.++++++++.. 
T Consensus        80 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~l~~~~~~~i~t~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~-  157 (238)
T 3ed5_A           80 EYGYEADGALLEQKYRRFLE-EGHQLIDGAFDLISNLQQQFDLYIVTNGVSHTQYKRLRDSGLFPFFKDIFVSEDTGFQ-  157 (238)
T ss_dssp             HTTCCCCHHHHHHHHHHHHT-TCCCBCTTHHHHHHHHHTTSEEEEEECSCHHHHHHHHHHTTCGGGCSEEEEGGGTTSC-
T ss_pred             HcCCCCcHHHHHHHHHHHHH-hcCCCCccHHHHHHHHHhcCeEEEEeCCCHHHHHHHHHHcChHhhhheEEEecccCCC-
Confidence            44555555655555544333 34789999999999887  678899999999999999999999999999999988774 


Q ss_pred             CCCCCCCCcccccCCccccccCCCCHHHHHHHHHHhC-CCCCcEEEEeCCh-hcHHHHHHcCCeEEEECCCCC----CCC
Q 027403          110 QPADNTDGIENNSFSSNQRILCKPSLEAIETAIRIAN-VDPKKTIFFDDSA-RNIASAKAAGLHTVIVGSSVP----VPP  183 (224)
Q Consensus       110 ~~~~~~~~~~~~~~~~~~~~~~KP~~~~~~~al~~~~-~~~~~~l~VgDs~-~Di~~A~~~G~~~v~v~~~~~----~~~  183 (224)
                                            ||++.+|..+++++| ++|++|++|||+. +|+.+|+++|+.++++.++..    ...
T Consensus       158 ----------------------kp~~~~~~~~~~~~g~~~~~~~i~vGD~~~~Di~~a~~aG~~~i~~~~~~~~~~~~~~  215 (238)
T 3ed5_A          158 ----------------------KPMKEYFNYVFERIPQFSAEHTLIIGDSLTADIKGGQLAGLDTCWMNPDMKPNVPEII  215 (238)
T ss_dssp             ----------------------TTCHHHHHHHHHTSTTCCGGGEEEEESCTTTTHHHHHHTTCEEEEECTTCCCCTTCCC
T ss_pred             ----------------------CCChHHHHHHHHHcCCCChhHeEEECCCcHHHHHHHHHCCCEEEEECCCCCCCcccCC
Confidence                                  999999999999999 9999999999998 999999999999999988743    456


Q ss_pred             CceEeCCHhHHHHHHHH
Q 027403          184 ADHALNSIHNIKEAIPE  200 (224)
Q Consensus       184 ~d~~i~~~~dl~~~i~~  200 (224)
                      ++++++++.+|.++|.+
T Consensus       216 ad~v~~~~~el~~~l~~  232 (238)
T 3ed5_A          216 PTYEIRKLEELYHILNI  232 (238)
T ss_dssp             CSEEESSGGGHHHHHTC
T ss_pred             CCeEECCHHHHHHHHHh
Confidence            89999999999987653

>3qxg_A Inorganic pyrophosphatase; hydrolase, magnesium binding site, NEW YORK research center for structural genomics; HET: TLA; 1.24A {Bacteroides thetaiotaomicron} PDB: 3qu2_A* 3qx7_A 3quq_A* 3r9k_A 3qut_A 3qu9_A* 3qu7_A 3qu5_A 3qyp_A 3quc_A 3qub_A 3qu4_A

Probab=99.83  E-value=4.7e-20  Score=153.49  Aligned_cols=146  Identities=18%  Similarity=0.280  Sum_probs=122.7

Q ss_pred             ccCCCCHHHHHHHHhcc----CCCCCCCCChhHHHHHhcCC---CCeEEEeCCChHHHHHHHHHcCCcccc--ceeEeec
Q 027403           33 VGYEFDNDEFHAFVHGK----LPYEKLKPDPVLRNLLLSMP---QRKIIFTNADQKHAMEVLGRLGLEDCF--EGIICFE  103 (224)
Q Consensus        33 ~~~~~~~~~~~~~~~~~----~~~~~~~~~~g~~~~L~~l~---~~~~I~Tn~~~~~~~~~l~~lgl~~~f--d~ii~~~  103 (224)
                      ++...+.+++...+...    .......++||+.++|+.|+   ++++|+||++...+...++. |+.++|  +.+++++
T Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~-~l~~~f~~d~i~~~~  160 (243)
T 3qxg_A           82 LGKEATQEEIESIYHEKSILFNSYPEAERMPGAWELLQKVKSEGLTPMVVTGSGQLSLLERLEH-NFPGMFHKELMVTAF  160 (243)
T ss_dssp             HSSCCCHHHHHHHHHHHHHHHHTSSCCCBCTTHHHHHHHHHHTTCEEEEECCCCCHHHHTTHHH-HSTTTCCGGGEECTT
T ss_pred             hCCCCCHHHHHHHHHHHHHHHHhcccCCCCCCHHHHHHHHHHcCCcEEEEeCCcHHHHHHHHHH-hHHHhcCcceEEeHH
Confidence            45555665554433221    11245789999999999986   68899999999888889999 999999  8899999


Q ss_pred             cCCCCCCCCCCCCCcccccCCccccccCCCCHHHHHHHHHHhCCCCCcEEEEeCChhcHHHHHHcCCeEEEECCCCC---
Q 027403          104 TINPRLQPADNTDGIENNSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP---  180 (224)
Q Consensus       104 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~~~~~~~al~~~~~~~~~~l~VgDs~~Di~~A~~~G~~~v~v~~~~~---  180 (224)
                      ++...                       ||+|.+|..+++++|++|++|++|||+.+|+.+|+++|+.++++.++..   
T Consensus       161 ~~~~~-----------------------kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~v~~~~~~~~  217 (243)
T 3qxg_A          161 DVKYG-----------------------KPNPEPYLMALKKGGLKADEAVVIENAPLGVEAGHKAGIFTIAVNTGPLDGQ  217 (243)
T ss_dssp             TCSSC-----------------------TTSSHHHHHHHHHTTCCGGGEEEEECSHHHHHHHHHTTCEEEEECCSSSCHH
T ss_pred             hCCCC-----------------------CCChHHHHHHHHHcCCCHHHeEEEeCCHHHHHHHHHCCCEEEEEeCCCCCHH
Confidence            88764                       9999999999999999999999999999999999999999999998864   


Q ss_pred             ---CCCCceEeCCHhHHHHHHHHHH
Q 027403          181 ---VPPADHALNSIHNIKEAIPEIW  202 (224)
Q Consensus       181 ---~~~~d~~i~~~~dl~~~i~~~~  202 (224)
                         ...++++++++.||.++|.+++
T Consensus       218 ~l~~~~ad~v~~s~~el~~~l~~li  242 (243)
T 3qxg_A          218 VLLDAGADLLFPSMQTLCDSWDTIM  242 (243)
T ss_dssp             HHHHTTCSEEESCHHHHHHHHHHHT
T ss_pred             HHHhcCCCEEECCHHHHHHHHHhhh
Confidence               2369999999999999988764

>3umb_A Dehalogenase-like hydrolase; 2.20A {Ralstonia solanacearum}

Probab=99.83  E-value=1e-19  Score=149.49  Aligned_cols=143  Identities=13%  Similarity=0.161  Sum_probs=121.0

Q ss_pred             HccCCCCHHHHHHHHhccCCCCCCCCChhHHHHHhcCC---CCeEEEeCCChHHHHHHHHHcCCccccceeEeeccCCCC
Q 027403           32 AVGYEFDNDEFHAFVHGKLPYEKLKPDPVLRNLLLSMP---QRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPR  108 (224)
Q Consensus        32 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~L~~l~---~~~~I~Tn~~~~~~~~~l~~lgl~~~fd~ii~~~~~~~~  108 (224)
                      ..|...+.+........   +....++|++.++|+.|+   ++++|+||++...+...++++|+.++|+.++++++....
T Consensus        78 ~~g~~~~~~~~~~~~~~---~~~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~  154 (233)
T 3umb_A           78 RLNLPLGNHAEATLMRE---YACLSAFPENVPVLRQLREMGLPLGILSNGNPQMLEIAVKSAGMSGLFDHVLSVDAVRLY  154 (233)
T ss_dssp             HTTCCCCHHHHHHHHHH---HHSCEECTTHHHHHHHHHTTTCCEEEEESSCHHHHHHHHHTTTCTTTCSEEEEGGGTTCC
T ss_pred             HcCCCCCHHHHHHHHHH---HhcCCCCCCHHHHHHHHHhCCCcEEEEeCCCHHHHHHHHHHCCcHhhcCEEEEecccCCC
Confidence            44555555444333322   123678999999999986   688999999999999999999999999999999988764


Q ss_pred             CCCCCCCCCcccccCCccccccCCCCHHHHHHHHHHhCCCCCcEEEEeCChhcHHHHHHcCCeEEEECCCCC-----CCC
Q 027403          109 LQPADNTDGIENNSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP-----VPP  183 (224)
Q Consensus       109 ~~~~~~~~~~~~~~~~~~~~~~~KP~~~~~~~al~~~~~~~~~~l~VgDs~~Di~~A~~~G~~~v~v~~~~~-----~~~  183 (224)
                                             ||+|.+|..+++++|++|++|++|||+.+|+.+|+++|+.++++.++..     ...
T Consensus       155 -----------------------kp~~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~a~~~G~~~~~v~~~~~~~~~~~~~  211 (233)
T 3umb_A          155 -----------------------KTAPAAYALAPRAFGVPAAQILFVSSNGWDACGATWHGFTTFWINRLGHPPEALDVA  211 (233)
T ss_dssp             -----------------------TTSHHHHTHHHHHHTSCGGGEEEEESCHHHHHHHHHHTCEEEEECTTCCCCCSSSCC
T ss_pred             -----------------------CcCHHHHHHHHHHhCCCcccEEEEeCCHHHHHHHHHcCCEEEEEcCCCCCchhccCC
Confidence                                   9999999999999999999999999999999999999999999988753     345


Q ss_pred             CceEeCCHhHHHHHHHH
Q 027403          184 ADHALNSIHNIKEAIPE  200 (224)
Q Consensus       184 ~d~~i~~~~dl~~~i~~  200 (224)
                      ++++++|+.||.++|.+
T Consensus       212 ~~~v~~~~~el~~~l~~  228 (233)
T 3umb_A          212 PAAAGHDMRDLLQFVQA  228 (233)
T ss_dssp             CSEEESSHHHHHHHHHC
T ss_pred             CCEEECCHHHHHHHHHH
Confidence            89999999999987754

>2gfh_A Haloacid dehalogenase-like hydrolase domain conta; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.90A {Mus musculus} SCOP: c.108.1.6 PDB: 2w4m_A

Probab=99.83  E-value=8e-20  Score=155.94  Aligned_cols=126  Identities=18%  Similarity=0.274  Sum_probs=113.9

Q ss_pred             CCCCChhHHHHHhcCC--CCeEEEeCCChHHHHHHHHHcCCccccceeEeeccCCCCCCCCCCCCCcccccCCccccccC
Q 027403           54 KLKPDPVLRNLLLSMP--QRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILC  131 (224)
Q Consensus        54 ~~~~~~g~~~~L~~l~--~~~~I~Tn~~~~~~~~~l~~lgl~~~fd~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  131 (224)
                      .+.++||+.++|+.|+  ++++|+||++...+...++++|+.++|+.++++++++..                       
T Consensus       119 ~~~~~~g~~~~L~~L~~~~~l~i~Tn~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~-----------------------  175 (260)
T 2gfh_A          119 HMILADDVKAMLTELRKEVRLLLLTNGDRQTQREKIEACACQSYFDAIVIGGEQKEE-----------------------  175 (260)
T ss_dssp             TCCCCHHHHHHHHHHHTTSEEEEEECSCHHHHHHHHHHHTCGGGCSEEEEGGGSSSC-----------------------
T ss_pred             cCCCCcCHHHHHHHHHcCCcEEEEECcChHHHHHHHHhcCHHhhhheEEecCCCCCC-----------------------
Confidence            4689999999999996  678999999999999999999999999999999988764                       


Q ss_pred             CCCHHHHHHHHHHhCCCCCcEEEEeCC-hhcHHHHHHcCC-eEEEECCCCC-----CCCCceEeCCHhHHHHHHHHHH
Q 027403          132 KPSLEAIETAIRIANVDPKKTIFFDDS-ARNIASAKAAGL-HTVIVGSSVP-----VPPADHALNSIHNIKEAIPEIW  202 (224)
Q Consensus       132 KP~~~~~~~al~~~~~~~~~~l~VgDs-~~Di~~A~~~G~-~~v~v~~~~~-----~~~~d~~i~~~~dl~~~i~~~~  202 (224)
                      ||+|.+|..+++++|++|++|+||||+ .+|+.+|+++|+ .++++.++..     ...++++++++.+|.+++.++.
T Consensus       176 KP~p~~~~~~~~~~~~~~~~~~~vGDs~~~Di~~A~~aG~~~~i~v~~~~~~~~~~~~~~~~~i~~~~el~~~l~~~~  253 (260)
T 2gfh_A          176 KPAPSIFYHCCDLLGVQPGDCVMVGDTLETDIQGGLNAGLKATVWINKSGRVPLTSSPMPHYMVSSVLELPALLQSID  253 (260)
T ss_dssp             TTCHHHHHHHHHHHTCCGGGEEEEESCTTTHHHHHHHTTCSEEEEECTTCCCCSSCCCCCSEEESSGGGHHHHHHHHT
T ss_pred             CCCHHHHHHHHHHcCCChhhEEEECCCchhhHHHHHHCCCceEEEEcCCCCCcCcccCCCCEEECCHHHHHHHHHHHh
Confidence            999999999999999999999999996 899999999999 8999987632     3458999999999999887654

>3um9_A Haloacid dehalogenase, type II; haloacid dehalogenase-like hydrolase protein superfamily, defluorinase, hydrolase; 2.19A {Polaromonas SP}

Probab=99.83  E-value=1.1e-19  Score=148.73  Aligned_cols=143  Identities=17%  Similarity=0.278  Sum_probs=121.8

Q ss_pred             HccCCCCHHHHHHHHhccCCCCCCCCChhHHHHHhcCC---CCeEEEeCCChHHHHHHHHHcCCccccceeEeeccCCCC
Q 027403           32 AVGYEFDNDEFHAFVHGKLPYEKLKPDPVLRNLLLSMP---QRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPR  108 (224)
Q Consensus        32 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~L~~l~---~~~~I~Tn~~~~~~~~~l~~lgl~~~fd~ii~~~~~~~~  108 (224)
                      ..+...+.+........   +....++|++.++|+.++   ++++|+||++...+...++++|+.++|+.++++++.+..
T Consensus        75 ~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~  151 (230)
T 3um9_A           75 SLGLALDADGEAHLCSE---YLSLTPFADVPQALQQLRAAGLKTAILSNGSRHSIRQVVGNSGLTNSFDHLISVDEVRLF  151 (230)
T ss_dssp             HHTCCCCHHHHHHHHHH---TTSCCBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHTCGGGCSEEEEGGGTTCC
T ss_pred             HcCCCCCHHHHHHHHHH---HhcCCCCCCHHHHHHHHHhCCCeEEEEeCCCHHHHHHHHHHCCChhhcceeEehhhcccC
Confidence            44555555444443332   245789999999999986   678999999999999999999999999999999988764


Q ss_pred             CCCCCCCCCcccccCCccccccCCCCHHHHHHHHHHhCCCCCcEEEEeCChhcHHHHHHcCCeEEEECCCCC-----CCC
Q 027403          109 LQPADNTDGIENNSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP-----VPP  183 (224)
Q Consensus       109 ~~~~~~~~~~~~~~~~~~~~~~~KP~~~~~~~al~~~~~~~~~~l~VgDs~~Di~~A~~~G~~~v~v~~~~~-----~~~  183 (224)
                                             ||++.+|..+++++|++|++|++|||+.+|+.+|+++|+.++++.++..     ...
T Consensus       152 -----------------------kp~~~~~~~~~~~~~~~~~~~~~iGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~~  208 (230)
T 3um9_A          152 -----------------------KPHQKVYELAMDTLHLGESEILFVSCNSWDATGAKYFGYPVCWINRSNGVFDQLGVV  208 (230)
T ss_dssp             -----------------------TTCHHHHHHHHHHHTCCGGGEEEEESCHHHHHHHHHHTCCEEEECTTSCCCCCSSCC
T ss_pred             -----------------------CCChHHHHHHHHHhCCCcccEEEEeCCHHHHHHHHHCCCEEEEEeCCCCccccccCC
Confidence                                   9999999999999999999999999999999999999999999988753     346


Q ss_pred             CceEeCCHhHHHHHHHH
Q 027403          184 ADHALNSIHNIKEAIPE  200 (224)
Q Consensus       184 ~d~~i~~~~dl~~~i~~  200 (224)
                      ++++++|+.+|.++|.+
T Consensus       209 ~~~~~~~~~el~~~l~~  225 (230)
T 3um9_A          209 PDIVVSDVGVLASRFSP  225 (230)
T ss_dssp             CSEEESSHHHHHHTCCC
T ss_pred             CcEEeCCHHHHHHHHHH
Confidence            89999999999887654

>3s6j_A Hydrolase, haloacid dehalogenase-like family; structural genomics, PSI-2; 2.20A {Pseudomonas syringae PV}

Probab=99.82  E-value=5e-20  Score=150.77  Aligned_cols=125  Identities=16%  Similarity=0.092  Sum_probs=113.5

Q ss_pred             CCCCChhHHHHHhcCC---CCeEEEeCCChHHHHHHHHHcCCccccceeEeeccCCCCCCCCCCCCCcccccCCcccccc
Q 027403           54 KLKPDPVLRNLLLSMP---QRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRIL  130 (224)
Q Consensus        54 ~~~~~~g~~~~L~~l~---~~~~I~Tn~~~~~~~~~l~~lgl~~~fd~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  130 (224)
                      ...++|++.++|+.++   ++++|+||++...+...++++|+.++|+.++++++....                      
T Consensus        89 ~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~----------------------  146 (233)
T 3s6j_A           89 QIIALPGAVELLETLDKENLKWCIATSGGIDTATINLKALKLDINKINIVTRDDVSYG----------------------  146 (233)
T ss_dssp             GCEECTTHHHHHHHHHHTTCCEEEECSSCHHHHHHHHHTTTCCTTSSCEECGGGSSCC----------------------
T ss_pred             cCccCCCHHHHHHHHHHCCCeEEEEeCCchhhHHHHHHhcchhhhhheeeccccCCCC----------------------
Confidence            4688999999999986   789999999999999999999999999999999988764                      


Q ss_pred             CCCCHHHHHHHHHHhCCCCCcEEEEeCChhcHHHHHHcCCeEEEECCCCC------CCCCceEeCCHhHHHHHHHHH
Q 027403          131 CKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP------VPPADHALNSIHNIKEAIPEI  201 (224)
Q Consensus       131 ~KP~~~~~~~al~~~~~~~~~~l~VgDs~~Di~~A~~~G~~~v~v~~~~~------~~~~d~~i~~~~dl~~~i~~~  201 (224)
                       ||++.+|..+++++|++|++|++|||+.+|+.+|+++|+.+++|.++..      ..++|++++++.||.++|.+.
T Consensus       147 -kp~~~~~~~~~~~l~~~~~~~i~iGD~~~Di~~a~~aG~~~i~v~~g~~~~~~l~~~~ad~v~~~~~el~~~l~~~  222 (233)
T 3s6j_A          147 -KPDPDLFLAAAKKIGAPIDECLVIGDAIWDMLAARRCKATGVGLLSGGYDIGELERAGALRVYEDPLDLLNHLDEI  222 (233)
T ss_dssp             -TTSTHHHHHHHHHTTCCGGGEEEEESSHHHHHHHHHTTCEEEEEGGGSCCHHHHHHTTCSEEESSHHHHHHTGGGT
T ss_pred             -CCChHHHHHHHHHhCCCHHHEEEEeCCHHhHHHHHHCCCEEEEEeCCCCchHhHHhcCCCEEECCHHHHHHHHHHH
Confidence             9999999999999999999999999999999999999999999988743      345999999999998876544

>3mc1_A Predicted phosphatase, HAD family; PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.93A {Clostridium acetobutylicum} SCOP: c.108.1.0

Probab=99.82  E-value=5.6e-20  Score=150.40  Aligned_cols=126  Identities=17%  Similarity=0.186  Sum_probs=115.3

Q ss_pred             CCCCCChhHHHHHhcCC---CCeEEEeCCChHHHHHHHHHcCCccccceeEeeccCCCCCCCCCCCCCcccccCCccccc
Q 027403           53 EKLKPDPVLRNLLLSMP---QRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRI  129 (224)
Q Consensus        53 ~~~~~~~g~~~~L~~l~---~~~~I~Tn~~~~~~~~~l~~lgl~~~fd~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  129 (224)
                      ....++||+.++|+.|+   ++++|+||++...+...++.+|+.++|+.++++++....                     
T Consensus        83 ~~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~---------------------  141 (226)
T 3mc1_A           83 FENKVYDGIEALLSSLKDYGFHLVVATSKPTVFSKQILEHFKLAFYFDAIVGSSLDGKL---------------------  141 (226)
T ss_dssp             GSCCBCTTHHHHHHHHHHHTCEEEEEEEEEHHHHHHHHHHTTCGGGCSEEEEECTTSSS---------------------
T ss_pred             ccCccCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhCCHhheeeeeccCCCCCC---------------------
Confidence            34689999999999996   789999999999999999999999999999999988764                     


Q ss_pred             cCCCCHHHHHHHHHHhCCCCCcEEEEeCChhcHHHHHHcCCeEEEECCCCC------CCCCceEeCCHhHHHHHHHHH
Q 027403          130 LCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP------VPPADHALNSIHNIKEAIPEI  201 (224)
Q Consensus       130 ~~KP~~~~~~~al~~~~~~~~~~l~VgDs~~Di~~A~~~G~~~v~v~~~~~------~~~~d~~i~~~~dl~~~i~~~  201 (224)
                        ||++.+|..+++++|++|++|++|||+.+|+.+|+++|+.+++|.++..      ...+|++++|+.||.+++.+.
T Consensus       142 --kp~~~~~~~~~~~lgi~~~~~i~iGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~ad~v~~s~~el~~~~~~~  217 (226)
T 3mc1_A          142 --STKEDVIRYAMESLNIKSDDAIMIGDREYDVIGALKNNLPSIGVTYGFGSYEELKNAGANYIVNSVDELHKKILEL  217 (226)
T ss_dssp             --CSHHHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHTTTCCEEEESSSSSCHHHHHHHTCSEEESSHHHHHHHHHTC
T ss_pred             --CCCHHHHHHHHHHhCcCcccEEEECCCHHHHHHHHHCCCCEEEEccCCCCHHHHHHcCCCEEECCHHHHHHHHHHH
Confidence              9999999999999999999999999999999999999999999998764      256899999999999887654

>3kzx_A HAD-superfamily hydrolase, subfamily IA, variant; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ehrlich chaffeensis; 1.90A {Ehrlichia chaffeensis}

Probab=99.82  E-value=1.9e-19  Score=148.17  Aligned_cols=128  Identities=21%  Similarity=0.253  Sum_probs=114.5

Q ss_pred             CCCCCCChhHHHHHhcCC---CCeEEEeCCChHHHHHHHHHcCCccccceeEeeccCCCCCCCCCCCCCcccccCCcccc
Q 027403           52 YEKLKPDPVLRNLLLSMP---QRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQR  128 (224)
Q Consensus        52 ~~~~~~~~g~~~~L~~l~---~~~~I~Tn~~~~~~~~~l~~lgl~~~fd~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~  128 (224)
                      .....++||+.++|+.|+   ++++|+||++...+...++.+|+.++|+.+++++++...                    
T Consensus        99 ~~~~~~~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~--------------------  158 (231)
T 3kzx_A           99 SDNFMLNDGAIELLDTLKENNITMAIVSNKNGERLRSEIHHKNLTHYFDSIIGSGDTGTI--------------------  158 (231)
T ss_dssp             CCCCEECTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCGGGCSEEEEETSSSCC--------------------
T ss_pred             cccceECcCHHHHHHHHHHCCCeEEEEECCCHHHHHHHHHHCCchhheeeEEcccccCCC--------------------
Confidence            456789999999999996   678999999999999999999999999999999988774                    


Q ss_pred             ccCCCCHHHHHHHHHHhCCCCC-cEEEEeCChhcHHHHHHcCCeEEEECCCCCCCCCceEeCCHhHHHHHHHHHHh
Q 027403          129 ILCKPSLEAIETAIRIANVDPK-KTIFFDDSARNIASAKAAGLHTVIVGSSVPVPPADHALNSIHNIKEAIPEIWE  203 (224)
Q Consensus       129 ~~~KP~~~~~~~al~~~~~~~~-~~l~VgDs~~Di~~A~~~G~~~v~v~~~~~~~~~d~~i~~~~dl~~~i~~~~~  203 (224)
                         ||++.+|..+++++|++|+ +|++|||+.+|+.+|+++|+.++++.++.. ..+++++.++.+|.++|.++++
T Consensus       159 ---Kp~~~~~~~~~~~lgi~~~~~~v~vGD~~~Di~~a~~aG~~~v~~~~~~~-~~~~~~~~~~~el~~~l~~~l~  230 (231)
T 3kzx_A          159 ---KPSPEPVLAALTNINIEPSKEVFFIGDSISDIQSAIEAGCLPIKYGSTNI-IKDILSFKNFYDIRNFICQLIN  230 (231)
T ss_dssp             ---TTSSHHHHHHHHHHTCCCSTTEEEEESSHHHHHHHHHTTCEEEEECC------CCEEESSHHHHHHHHHHHHC
T ss_pred             ---CCChHHHHHHHHHcCCCcccCEEEEcCCHHHHHHHHHCCCeEEEECCCCC-CCCceeeCCHHHHHHHHHHHhc
Confidence               9999999999999999999 999999999999999999999999977653 5789999999999999988764

>2hi0_A Putative phosphoglycolate phosphatase; YP_619066.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.51A {Lactobacillus delbrueckii}

Probab=99.82  E-value=1.1e-19  Score=152.02  Aligned_cols=122  Identities=17%  Similarity=0.248  Sum_probs=110.0

Q ss_pred             CCCCCChhHHHHHhcCC---CCeEEEeCCChHHHHHHHHHcCCccccceeEeeccCCCCCCCCCCCCCcccccCCccccc
Q 027403           53 EKLKPDPVLRNLLLSMP---QRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRI  129 (224)
Q Consensus        53 ~~~~~~~g~~~~L~~l~---~~~~I~Tn~~~~~~~~~l~~lgl~~~fd~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  129 (224)
                      ....++||+.++|+.|+   ++++|+||++...+...++++|+. +|+.+++++++...                     
T Consensus       107 ~~~~~~~g~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~-~f~~~~~~~~~~~~---------------------  164 (240)
T 2hi0_A          107 IKTGPFPGILDLMKNLRQKGVKLAVVSNKPNEAVQVLVEELFPG-SFDFALGEKSGIRR---------------------  164 (240)
T ss_dssp             SSCEECTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHSTT-TCSEEEEECTTSCC---------------------
T ss_pred             hcCCcCCCHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCc-ceeEEEecCCCCCC---------------------
Confidence            45688999999999885   678899999999999999999998 99999999887764                     


Q ss_pred             cCCCCHHHHHHHHHHhCCCCCcEEEEeCChhcHHHHHHcCCeEEEECCCCC------CCCCceEeCCHhHHHHHH
Q 027403          130 LCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP------VPPADHALNSIHNIKEAI  198 (224)
Q Consensus       130 ~~KP~~~~~~~al~~~~~~~~~~l~VgDs~~Di~~A~~~G~~~v~v~~~~~------~~~~d~~i~~~~dl~~~i  198 (224)
                        ||+|.+|..+++++|++|++|++|||+.+|+.+|+++|+.++++.++..      ...++++++++.++.+++
T Consensus       165 --Kp~p~~~~~~~~~l~~~~~~~~~vGDs~~Di~~a~~aG~~~v~v~~~~~~~~~~~~~~a~~~~~~~~el~~~l  237 (240)
T 2hi0_A          165 --KPAPDMTSECVKVLGVPRDKCVYIGDSEIDIQTARNSEMDEIAVNWGFRSVPFLQKHGATVIVDTAEKLEEAI  237 (240)
T ss_dssp             --TTSSHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHHTTCEEEEESSSSSCHHHHHHTTCCCEECSHHHHHHHH
T ss_pred             --CCCHHHHHHHHHHcCCCHHHeEEEcCCHHHHHHHHHCCCeEEEECCCCCchhHHHhcCCCEEECCHHHHHHHh
Confidence              9999999999999999999999999999999999999999999998753      246899999999987765

>2nyv_A Pgpase, PGP, phosphoglycolate phosphatase; structural genomics, PSI-2, protein structure initiative; 2.10A {Aquifex aeolicus} PDB: 2yy6_A

Probab=99.81  E-value=1.7e-19  Score=149.36  Aligned_cols=129  Identities=19%  Similarity=0.261  Sum_probs=115.4

Q ss_pred             CCCCCChhHHHHHhcCC---CCeEEEeCCChHHHHHHHHHcCCccccceeEeeccCCCCCCCCCCCCCcccccCCccccc
Q 027403           53 EKLKPDPVLRNLLLSMP---QRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRI  129 (224)
Q Consensus        53 ~~~~~~~g~~~~L~~l~---~~~~I~Tn~~~~~~~~~l~~lgl~~~fd~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  129 (224)
                      ....++||+.++|+.|+   ++++|+||++...+...++++|+.++|+.+++++++...                     
T Consensus        80 ~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~---------------------  138 (222)
T 2nyv_A           80 VYTKPYPEIPYTLEALKSKGFKLAVVSNKLEELSKKILDILNLSGYFDLIVGGDTFGEK---------------------  138 (222)
T ss_dssp             SSCEECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGCSEEECTTSSCTT---------------------
T ss_pred             ccCccCCCHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCHHHheEEEecCcCCCC---------------------
Confidence            45789999999999985   678999999999999999999999999999999887764                     


Q ss_pred             cCCCCHHHHHHHHHHhCCCCCcEEEEeCChhcHHHHHHcCCeEEEECCCCC---CCCCceEeCCHhHHHHHHHHHHhh
Q 027403          130 LCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP---VPPADHALNSIHNIKEAIPEIWEG  204 (224)
Q Consensus       130 ~~KP~~~~~~~al~~~~~~~~~~l~VgDs~~Di~~A~~~G~~~v~v~~~~~---~~~~d~~i~~~~dl~~~i~~~~~~  204 (224)
                        ||+|.+|..+++++|++|++|++|||+.+|+.+|+++|+.++++.++..   ...++++++++.++.+++.+....
T Consensus       139 --Kp~~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~~~~~~~el~~~l~~~~~~  214 (222)
T 2nyv_A          139 --KPSPTPVLKTLEILGEEPEKALIVGDTDADIEAGKRAGTKTALALWGYVKLNSQIPDFTLSRPSDLVKLMDNHIVE  214 (222)
T ss_dssp             --CCTTHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHHHTCEEEEETTSSCSCCCCCCSEEESSTTHHHHHHHTTSSE
T ss_pred             --CCChHHHHHHHHHhCCCchhEEEECCCHHHHHHHHHCCCeEEEEcCCCCCccccCCCEEECCHHHHHHHHHHhhhh
Confidence              9999999999999999999999999999999999999999999988753   256899999999999887654433

>3l8h_A Putative haloacid dehalogenase-like hydrolase; HAD superfamily, GMHB, D-glycero-D-manno-heptose-1, 7-bispho phosphatase; HET: FX1; 1.68A {Bordetella bronchiseptica}

Probab=99.81  E-value=1.4e-19  Score=145.14  Aligned_cols=122  Identities=16%  Similarity=0.184  Sum_probs=104.5

Q ss_pred             CCCCChhHHHHHhcCC---CCeEEEeCCCh---------------HHHHHHHHHcCCccccceeEe-----eccCCCCCC
Q 027403           54 KLKPDPVLRNLLLSMP---QRKIIFTNADQ---------------KHAMEVLGRLGLEDCFEGIIC-----FETINPRLQ  110 (224)
Q Consensus        54 ~~~~~~g~~~~L~~l~---~~~~I~Tn~~~---------------~~~~~~l~~lgl~~~fd~ii~-----~~~~~~~~~  110 (224)
                      .++++||+.++|+.|+   ++++|+||++.               ..+...++++|  .+|+.++.     +++...   
T Consensus        25 ~~~~~~g~~~~l~~L~~~g~~~~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~g--~~~~~~~~~~~~~~~~~~~---   99 (179)
T 3l8h_A           25 EWIALPGSLQAIARLTQADWTVVLATNQSGLARGLFDTATLNAIHDKMHRALAQMG--GVVDAIFMCPHGPDDGCAC---   99 (179)
T ss_dssp             GCCBCTTHHHHHHHHHHTTCEEEEEEECTTTTTTSSCHHHHHHHHHHHHHHHHHTT--CCCCEEEEECCCTTSCCSS---
T ss_pred             HceECcCHHHHHHHHHHCCCEEEEEECCCccccCcCCHHHHHHHHHHHHHHHHhCC--CceeEEEEcCCCCCCCCCC---
Confidence            5789999999999996   78899999986               67788889988  45665542     344444   


Q ss_pred             CCCCCCCcccccCCccccccCCCCHHHHHHHHHHhCCCCCcEEEEeCChhcHHHHHHcCCeEEEECCCCC--------CC
Q 027403          111 PADNTDGIENNSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP--------VP  182 (224)
Q Consensus       111 ~~~~~~~~~~~~~~~~~~~~~KP~~~~~~~al~~~~~~~~~~l~VgDs~~Di~~A~~~G~~~v~v~~~~~--------~~  182 (224)
                                          +||+|.+|..+++++|++|++|+||||+.+|+.+|+++|++++++.++..        ..
T Consensus       100 --------------------~KP~~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~~  159 (179)
T 3l8h_A          100 --------------------RKPLPGMYRDIARRYDVDLAGVPAVGDSLRDLQAAAQAGCAPWLVQTGNGRKTLAQGGLP  159 (179)
T ss_dssp             --------------------STTSSHHHHHHHHHHTCCCTTCEEEESSHHHHHHHHHHTCEEEEESTTTHHHHHHHCCCC
T ss_pred             --------------------CCCCHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHCCCcEEEECCCCcchhhhhcccC
Confidence                                49999999999999999999999999999999999999999999999863        26


Q ss_pred             CCceEeCCHhHHHHHHHH
Q 027403          183 PADHALNSIHNIKEAIPE  200 (224)
Q Consensus       183 ~~d~~i~~~~dl~~~i~~  200 (224)
                      .++++++++.||.++|.+
T Consensus       160 ~~d~v~~~l~el~~~l~~  177 (179)
T 3l8h_A          160 EGTRVCEDLAAVAEQLLQ  177 (179)
T ss_dssp             TTEEEESSHHHHHHHHHH
T ss_pred             CCcEEecCHHHHHHHHHh
Confidence            789999999999987753

>4g9b_A Beta-PGM, beta-phosphoglucomutase; HAD, putative phosphoglucomutase, enzyme function initiative structural genomics, isomerase; 1.70A {Escherichia coli}

Probab=99.81  E-value=7.5e-20  Score=154.27  Aligned_cols=126  Identities=21%  Similarity=0.269  Sum_probs=104.3

Q ss_pred             CCCChhHHHHHhcCC---CCeEEEeCCChHHHHHHHHHcCCccccceeEeeccCCCCCCCCCCCCCcccccCCccccccC
Q 027403           55 LKPDPVLRNLLLSMP---QRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILC  131 (224)
Q Consensus        55 ~~~~~g~~~~L~~l~---~~~~I~Tn~~~~~~~~~l~~lgl~~~fd~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  131 (224)
                      ..++||+.++|+.|+   .+++++||+..  ....++++|+.++||.++++++++..                       
T Consensus        94 ~~~~pg~~~ll~~L~~~g~~i~i~t~~~~--~~~~l~~~gl~~~fd~i~~~~~~~~~-----------------------  148 (243)
T 4g9b_A           94 NAVLPGIRSLLADLRAQQISVGLASVSLN--APTILAALELREFFTFCADASQLKNS-----------------------  148 (243)
T ss_dssp             GGBCTTHHHHHHHHHHTTCEEEECCCCTT--HHHHHHHTTCGGGCSEECCGGGCSSC-----------------------
T ss_pred             ccccccHHHHHHhhhcccccceecccccc--hhhhhhhhhhccccccccccccccCC-----------------------
Confidence            468899999999886   66778888754  56689999999999999999998875                       


Q ss_pred             CCCHHHHHHHHHHhCCCCCcEEEEeCChhcHHHHHHcCCeEEEECCCCCCCCCceEeCCHhHHH-HHHHHHHhhcCc
Q 027403          132 KPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVPVPPADHALNSIHNIK-EAIPEIWEGEGE  207 (224)
Q Consensus       132 KP~~~~~~~al~~~~~~~~~~l~VgDs~~Di~~A~~~G~~~v~v~~~~~~~~~d~~i~~~~dl~-~~i~~~~~~~~~  207 (224)
                      ||+|++|..+++++|++|++|+||||+.+||.+|+++|+++|+|.+|.  .+++..+++..++. +-+.++|+.-.+
T Consensus       149 KP~p~~~~~a~~~lg~~p~e~l~VgDs~~di~aA~~aG~~~I~V~~g~--~~ad~~~~~~~~l~~~~l~~~~~~l~~  223 (243)
T 4g9b_A          149 KPDPEIFLAACAGLGVPPQACIGIEDAQAGIDAINASGMRSVGIGAGL--TGAQLLLPSTESLTWPRLSAFWQNVAE  223 (243)
T ss_dssp             TTSTHHHHHHHHHHTSCGGGEEEEESSHHHHHHHHHHTCEEEEESTTC--CSCSEEESSGGGCCHHHHHHHHHHHSC
T ss_pred             CCcHHHHHHHHHHcCCChHHEEEEcCCHHHHHHHHHcCCEEEEECCCC--CcHHHhcCChhhcCHHHHHHHHHHHHH
Confidence            999999999999999999999999999999999999999999999985  45677777665542 334444444333

>3u26_A PF00702 domain protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, unknown function; 1.59A {Pyrococcus horikoshii} SCOP: c.108.1.1 PDB: 1x42_A

Probab=99.81  E-value=1.9e-19  Score=147.71  Aligned_cols=128  Identities=20%  Similarity=0.321  Sum_probs=115.3

Q ss_pred             CCCCChhHHHHHhcCC--CCeEEEeCCChHHHHHHHHHcCCccccceeEeeccCCCCCCCCCCCCCcccccCCccccccC
Q 027403           54 KLKPDPVLRNLLLSMP--QRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILC  131 (224)
Q Consensus        54 ~~~~~~g~~~~L~~l~--~~~~I~Tn~~~~~~~~~l~~lgl~~~fd~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  131 (224)
                      ...++|++.++|+.++  ++++|+||++...+...++.+|+.++|+.++++++.+..                       
T Consensus        98 ~~~~~~~~~~~l~~l~~~~~~~i~t~~~~~~~~~~l~~~~~~~~f~~~~~~~~~~~~-----------------------  154 (234)
T 3u26_A           98 YGELYPEVVEVLKSLKGKYHVGMITDSDTEQAMAFLDALGIKDLFDSITTSEEAGFF-----------------------  154 (234)
T ss_dssp             HCCBCTTHHHHHHHHTTTSEEEEEESSCHHHHHHHHHHTTCGGGCSEEEEHHHHTBC-----------------------
T ss_pred             hCCcCcCHHHHHHHHHhCCcEEEEECCCHHHHHHHHHHcCcHHHcceeEeccccCCC-----------------------
Confidence            3578899999999997  577899999999999999999999999999999987764                       


Q ss_pred             CCCHHHHHHHHHHhCCCCCcEEEEeCCh-hcHHHHHHcCCeEEEECCCCCC----CCCceEeCCHhHHHHHHHHHHhh
Q 027403          132 KPSLEAIETAIRIANVDPKKTIFFDDSA-RNIASAKAAGLHTVIVGSSVPV----PPADHALNSIHNIKEAIPEIWEG  204 (224)
Q Consensus       132 KP~~~~~~~al~~~~~~~~~~l~VgDs~-~Di~~A~~~G~~~v~v~~~~~~----~~~d~~i~~~~dl~~~i~~~~~~  204 (224)
                      ||++.+|..+++++|++|++|++|||+. +|+.+|+++|+.++++.++...    ..++++++|+.+|.+++.++.+.
T Consensus       155 kp~~~~~~~~~~~~~~~~~~~~~vGD~~~~Di~~a~~aG~~~~~v~~~~~~~~~~~~a~~~~~~~~el~~~l~~~~~~  232 (234)
T 3u26_A          155 KPHPRIFELALKKAGVKGEEAVYVGDNPVKDCGGSKNLGMTSILLDRKGEKREFWDKCDFIVSDLREVIKIVDELNGQ  232 (234)
T ss_dssp             TTSHHHHHHHHHHHTCCGGGEEEEESCTTTTHHHHHTTTCEEEEECSSSTTGGGGGGCSEEESSTHHHHHHHHHHC--
T ss_pred             CcCHHHHHHHHHHcCCCchhEEEEcCCcHHHHHHHHHcCCEEEEECCCCCccccccCCCEeeCCHHHHHHHHHHHhhc
Confidence            9999999999999999999999999998 9999999999999999988642    26899999999999999887654

>3e58_A Putative beta-phosphoglucomutase; structu genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.86A {Streptococcus thermophilus lmg 18311}

Probab=99.81  E-value=8e-20  Score=146.84  Aligned_cols=120  Identities=18%  Similarity=0.215  Sum_probs=110.1

Q ss_pred             CCCChhHHHHHhcCC---CCeEEEeCCChHHHHHHHHHcCCccccceeEeeccCCCCCCCCCCCCCcccccCCccccccC
Q 027403           55 LKPDPVLRNLLLSMP---QRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILC  131 (224)
Q Consensus        55 ~~~~~g~~~~L~~l~---~~~~I~Tn~~~~~~~~~l~~lgl~~~fd~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  131 (224)
                      ..++|++.++|+.++   .+++|+||++...+...++++|+.++|+.++++++....                       
T Consensus        88 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~-----------------------  144 (214)
T 3e58_A           88 ELIFPDVLKVLNEVKSQGLEIGLASSSVKADIFRALEENRLQGFFDIVLSGEEFKES-----------------------  144 (214)
T ss_dssp             HHBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGCSEEEEGGGCSSC-----------------------
T ss_pred             CCcCchHHHHHHHHHHCCCCEEEEeCCcHHHHHHHHHHcCcHhheeeEeecccccCC-----------------------
Confidence            478999999999996   678999999999999999999999999999999988764                       


Q ss_pred             CCCHHHHHHHHHHhCCCCCcEEEEeCChhcHHHHHHcCCeEEEECCCCC---CCCCceEeCCHhHHHHH
Q 027403          132 KPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP---VPPADHALNSIHNIKEA  197 (224)
Q Consensus       132 KP~~~~~~~al~~~~~~~~~~l~VgDs~~Di~~A~~~G~~~v~v~~~~~---~~~~d~~i~~~~dl~~~  197 (224)
                      ||++.+|..+++++|++|++|++|||+.+|+.+|+++|+.++++.++..   ...++++++|+.||.++
T Consensus       145 kp~~~~~~~~~~~~~~~~~~~~~iGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~a~~~~~~~~el~~~  213 (214)
T 3e58_A          145 KPNPEIYLTALKQLNVQASRALIIEDSEKGIAAGVAADVEVWAIRDNEFGMDQSAAKGLLDSLTDVLDL  213 (214)
T ss_dssp             TTSSHHHHHHHHHHTCCGGGEEEEECSHHHHHHHHHTTCEEEEECCSSSCCCCTTSSEEESSGGGGGGG
T ss_pred             CCChHHHHHHHHHcCCChHHeEEEeccHhhHHHHHHCCCEEEEECCCCccchhccHHHHHHHHHHHHhh
Confidence            9999999999999999999999999999999999999999999987632   46799999999998764

>3smv_A S-(-)-azetidine-2-carboxylate hydrolase; haloacid dehalogenase superfamily, L-azetidine-2- carboxylate; HET: GOL; 1.38A {Pseudomonas}

Probab=99.81  E-value=6.7e-19  Score=144.07  Aligned_cols=127  Identities=20%  Similarity=0.255  Sum_probs=112.6

Q ss_pred             CCCCCChhHHHHHhcCC--CCeEEEeCCChHHHHHHHHHcCCccccceeEeeccCCCCCCCCCCCCCcccccCCcccccc
Q 027403           53 EKLKPDPVLRNLLLSMP--QRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRIL  130 (224)
Q Consensus        53 ~~~~~~~g~~~~L~~l~--~~~~I~Tn~~~~~~~~~l~~lgl~~~fd~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  130 (224)
                      ..+.++|++.++|+.|+  ++++|+||++...+...++.  +..+|+.+++++++...                      
T Consensus        96 ~~~~~~~~~~~~l~~l~~~~~~~i~tn~~~~~~~~~l~~--l~~~fd~i~~~~~~~~~----------------------  151 (240)
T 3smv_A           96 KNWPAFPDTVEALQYLKKHYKLVILSNIDRNEFKLSNAK--LGVEFDHIITAQDVGSY----------------------  151 (240)
T ss_dssp             GGCCBCTTHHHHHHHHHHHSEEEEEESSCHHHHHHHHTT--TCSCCSEEEEHHHHTSC----------------------
T ss_pred             hcCCCCCcHHHHHHHHHhCCeEEEEeCCChhHHHHHHHh--cCCccCEEEEccccCCC----------------------
Confidence            34689999999999997  78999999999988888887  55799999999988774                      


Q ss_pred             CCCCHHHHHHH---HHHhCCCCCcEEEEeCCh-hcHHHHHHcCCeEEEECCC-----------C-CCCCCceEeCCHhHH
Q 027403          131 CKPSLEAIETA---IRIANVDPKKTIFFDDSA-RNIASAKAAGLHTVIVGSS-----------V-PVPPADHALNSIHNI  194 (224)
Q Consensus       131 ~KP~~~~~~~a---l~~~~~~~~~~l~VgDs~-~Di~~A~~~G~~~v~v~~~-----------~-~~~~~d~~i~~~~dl  194 (224)
                       ||+|.+|..+   ++++|++|++|++|||+. +|+.+|+++|+.++++.++           . ....+|++++|+.+|
T Consensus       152 -KP~~~~~~~~l~~~~~lgi~~~~~~~vGD~~~~Di~~a~~aG~~~~~~~~~~~~~g~g~~~~~~~~~~ad~v~~~~~el  230 (240)
T 3smv_A          152 -KPNPNNFTYMIDALAKAGIEKKDILHTAESLYHDHIPANDAGLVSAWIYRRHGKEGYGATHVPSRMPNVDFRFNSMGEM  230 (240)
T ss_dssp             -TTSHHHHHHHHHHHHHTTCCGGGEEEEESCTTTTHHHHHHHTCEEEEECTTCC-------CCCSSCCCCSEEESSHHHH
T ss_pred             -CCCHHHHHHHHHHHHhcCCCchhEEEECCCchhhhHHHHHcCCeEEEEcCCCcccCCCCCCCCcCCCCCCEEeCCHHHH
Confidence             9999999999   889999999999999996 9999999999999999865           1 136799999999999


Q ss_pred             HHHHHHHHhh
Q 027403          195 KEAIPEIWEG  204 (224)
Q Consensus       195 ~~~i~~~~~~  204 (224)
                      .+++.+++++
T Consensus       231 ~~~l~~~l~g  240 (240)
T 3smv_A          231 AEAHKQALKG  240 (240)
T ss_dssp             HHHHHHHHHC
T ss_pred             HHHHHHHhcC
Confidence            9999988763

>3k1z_A Haloacid dehalogenase-like hydrolase domain-conta protein 3; HDHD3, haloacid dehalogenase-like hydrolase domain containin structural genomics; 1.55A {Homo sapiens}

Probab=99.81  E-value=1.5e-19  Score=153.55  Aligned_cols=132  Identities=20%  Similarity=0.308  Sum_probs=115.9

Q ss_pred             CCCCCChhHHHHHhcCC---CCeEEEeCCChHHHHHHHHHcCCccccceeEeeccCCCCCCCCCCCCCcccccCCccccc
Q 027403           53 EKLKPDPVLRNLLLSMP---QRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRI  129 (224)
Q Consensus        53 ~~~~~~~g~~~~L~~l~---~~~~I~Tn~~~~~~~~~l~~lgl~~~fd~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  129 (224)
                      ..+.++||+.++|+.|+   ++++|+||++.. +...++.+|+.++|+.++++++++..                     
T Consensus       103 ~~~~~~~~~~~~l~~l~~~g~~~~i~tn~~~~-~~~~l~~~gl~~~f~~~~~~~~~~~~---------------------  160 (263)
T 3k1z_A          103 CTWQVLDGAEDTLRECRTRGLRLAVISNFDRR-LEGILGGLGLREHFDFVLTSEAAGWP---------------------  160 (263)
T ss_dssp             GGEEECTTHHHHHHHHHHTTCEEEEEESCCTT-HHHHHHHTTCGGGCSCEEEHHHHSSC---------------------
T ss_pred             ccceECcCHHHHHHHHHhCCCcEEEEeCCcHH-HHHHHHhCCcHHhhhEEEeecccCCC---------------------
Confidence            34679999999999986   678999998875 68899999999999999999988764                     


Q ss_pred             cCCCCHHHHHHHHHHhCCCCCcEEEEeCCh-hcHHHHHHcCCeEEEECCCCCCC-------CCceEeCCHhHHHHHHHHH
Q 027403          130 LCKPSLEAIETAIRIANVDPKKTIFFDDSA-RNIASAKAAGLHTVIVGSSVPVP-------PADHALNSIHNIKEAIPEI  201 (224)
Q Consensus       130 ~~KP~~~~~~~al~~~~~~~~~~l~VgDs~-~Di~~A~~~G~~~v~v~~~~~~~-------~~d~~i~~~~dl~~~i~~~  201 (224)
                        ||+|.+|..+++++|++|++|++|||+. +|+.+|+++|+.++++.++....       .++++++++.+|.++|.++
T Consensus       161 --Kp~~~~~~~~~~~~g~~~~~~~~vGD~~~~Di~~a~~aG~~~i~~~~~~~~~~~~~~~~~ad~v~~~l~el~~~l~~~  238 (263)
T 3k1z_A          161 --KPDPRIFQEALRLAHMEPVVAAHVGDNYLCDYQGPRAVGMHSFLVVGPQALDPVVRDSVPKEHILPSLAHLLPALDCL  238 (263)
T ss_dssp             --TTSHHHHHHHHHHHTCCGGGEEEEESCHHHHTHHHHTTTCEEEEECCSSCCCHHHHHHSCGGGEESSGGGHHHHHHHH
T ss_pred             --CCCHHHHHHHHHHcCCCHHHEEEECCCcHHHHHHHHHCCCEEEEEcCCCCCchhhcccCCCceEeCCHHHHHHHHHHH
Confidence              9999999999999999999999999997 99999999999999999986432       6999999999999999988


Q ss_pred             HhhcCcc
Q 027403          202 WEGEGEQ  208 (224)
Q Consensus       202 ~~~~~~~  208 (224)
                      ......+
T Consensus       239 ~~~~~~~  245 (263)
T 3k1z_A          239 EGSAENL  245 (263)
T ss_dssp             HHC----
T ss_pred             HhcCCCC
Confidence            7665443

>2no4_A (S)-2-haloacid dehalogenase IVA; HAD superfamily, rossman fold, hydrol; 1.93A {Burkholderia cepacia} PDB: 2no5_A*

Probab=99.81  E-value=3.4e-19  Score=148.03  Aligned_cols=126  Identities=17%  Similarity=0.219  Sum_probs=112.4

Q ss_pred             CCCCChhHHHHHhcCC---CCeEEEeCCChHHHHHHHHHcCCccccceeEeeccCCCCCCCCCCCCCcccccCCcccccc
Q 027403           54 KLKPDPVLRNLLLSMP---QRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRIL  130 (224)
Q Consensus        54 ~~~~~~g~~~~L~~l~---~~~~I~Tn~~~~~~~~~l~~lgl~~~fd~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  130 (224)
                      .+.++||+.++|+.|+   ++++|+||++...+...++++|+.++|+.++++++++..                      
T Consensus       103 ~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~----------------------  160 (240)
T 2no4_A          103 ELSAYPDAAETLEKLKSAGYIVAILSNGNDEMLQAALKASKLDRVLDSCLSADDLKIY----------------------  160 (240)
T ss_dssp             TCCBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGCSEEEEGGGTTCC----------------------
T ss_pred             cCCCCCCHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHhcCcHHHcCEEEEccccCCC----------------------
Confidence            3678999999999886   678899999999999999999999999999999988764                      


Q ss_pred             CCCCHHHHHHHHHHhCCCCCcEEEEeCChhcHHHHHHcCCeEEEECCCCC----CCCC-ceEeCCHhHHHHHHHHHH
Q 027403          131 CKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP----VPPA-DHALNSIHNIKEAIPEIW  202 (224)
Q Consensus       131 ~KP~~~~~~~al~~~~~~~~~~l~VgDs~~Di~~A~~~G~~~v~v~~~~~----~~~~-d~~i~~~~dl~~~i~~~~  202 (224)
                       ||+|.+|..+++++|++|++|++|||+.+|+.+|+++|+.++++.++..    ...+ +++++++.+|.+++..+.
T Consensus       161 -Kp~~~~~~~~~~~~~~~~~~~~~iGD~~~Di~~a~~aG~~~~~v~~~~~~~~~~~~~~~~~~~~~~el~~~l~~~~  236 (240)
T 2no4_A          161 -KPDPRIYQFACDRLGVNPNEVCFVSSNAWDLGGAGKFGFNTVRINRQGNPPEYEFAPLKHQVNSLSELWPLLAKNV  236 (240)
T ss_dssp             -TTSHHHHHHHHHHHTCCGGGEEEEESCHHHHHHHHHHTCEEEEECTTCCCCCCTTSCCSEEESSGGGHHHHHCC--
T ss_pred             -CCCHHHHHHHHHHcCCCcccEEEEeCCHHHHHHHHHCCCEEEEECCCCCCCcccCCCCceeeCCHHHHHHHHHHhh
Confidence             9999999999999999999999999999999999999999999988753    2347 999999999998775443

>1qq5_A Protein (L-2-haloacid dehalogenase); hydrolase; 1.52A {Xanthobacter autotrophicus} SCOP: c.108.1.1 PDB: 1qq6_A* 1qq7_A* 1aq6_A

Probab=99.80  E-value=1.7e-18  Score=145.47  Aligned_cols=125  Identities=17%  Similarity=0.329  Sum_probs=113.2

Q ss_pred             CCCCChhHHHHHhcCC-CCeEEEeCCChHHHHHHHHHcCCccccceeEeeccCCCCCCCCCCCCCcccccCCccccccCC
Q 027403           54 KLKPDPVLRNLLLSMP-QRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCK  132 (224)
Q Consensus        54 ~~~~~~g~~~~L~~l~-~~~~I~Tn~~~~~~~~~l~~lgl~~~fd~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~K  132 (224)
                      .+.++||+.++|+.|+ ++++|+||++...+...++++|+..+|+.++++++++..                       |
T Consensus        91 ~~~~~~~~~~~l~~l~g~~~~i~t~~~~~~~~~~l~~~gl~~~f~~~~~~~~~~~~-----------------------K  147 (253)
T 1qq5_A           91 RLTPYPDAAQCLAELAPLKRAILSNGAPDMLQALVANAGLTDSFDAVISVDAKRVF-----------------------K  147 (253)
T ss_dssp             SCCBCTTHHHHHHHHTTSEEEEEESSCHHHHHHHHHHTTCGGGCSEEEEGGGGTCC-----------------------T
T ss_pred             cCCCCccHHHHHHHHcCCCEEEEeCcCHHHHHHHHHHCCchhhccEEEEccccCCC-----------------------C
Confidence            4689999999999995 678899999999999999999999999999999988764                       9


Q ss_pred             CCHHHHHHHHHHhCCCCCcEEEEeCChhcHHHHHHcCCeEEEECC-----------------------CCC-----CCCC
Q 027403          133 PSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGS-----------------------SVP-----VPPA  184 (224)
Q Consensus       133 P~~~~~~~al~~~~~~~~~~l~VgDs~~Di~~A~~~G~~~v~v~~-----------------------~~~-----~~~~  184 (224)
                      |+|.+|..+++++|++|++|++|||+.+|+.+|+++|+.++++.+                       +..     ...+
T Consensus       148 p~~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~~  227 (253)
T 1qq5_A          148 PHPDSYALVEEVLGVTPAEVLFVSSNGFDVGGAKNFGFSVARVARLSQEALARELVSGTIAPLTMFKALRMREETYAEAP  227 (253)
T ss_dssp             TSHHHHHHHHHHHCCCGGGEEEEESCHHHHHHHHHHTCEEEEECCSCHHHHHHHTTSSSCCHHHHHHHHHSSCCTTSCCC
T ss_pred             CCHHHHHHHHHHcCCCHHHEEEEeCChhhHHHHHHCCCEEEEECCcccchhhhhcccccccccccccccccccCCCCCCC
Confidence            999999999999999999999999999999999999999999988                       211     3568


Q ss_pred             ceEeCCHhHHHHHHHHH
Q 027403          185 DHALNSIHNIKEAIPEI  201 (224)
Q Consensus       185 d~~i~~~~dl~~~i~~~  201 (224)
                      +++++|+.+|.+++.++
T Consensus       228 ~~~~~~~~el~~~l~~~  244 (253)
T 1qq5_A          228 DFVVPALGDLPRLVRGM  244 (253)
T ss_dssp             SEEESSGGGHHHHHHHH
T ss_pred             CeeeCCHHHHHHHHHHh
Confidence            99999999999988655

>4ex6_A ALNB; modified rossman fold, phosphatase, magnesium binding, hydro; 1.25A {Streptomyces SP} PDB: 4ex7_A

Probab=99.80  E-value=2.2e-19  Score=148.16  Aligned_cols=125  Identities=18%  Similarity=0.185  Sum_probs=114.1

Q ss_pred             CCCCCChhHHHHHhcCC---CCeEEEeCCChHHHHHHHHHcCCccccceeEeeccCCCCCCCCCCCCCcccccCCccccc
Q 027403           53 EKLKPDPVLRNLLLSMP---QRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRI  129 (224)
Q Consensus        53 ~~~~~~~g~~~~L~~l~---~~~~I~Tn~~~~~~~~~l~~lgl~~~fd~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  129 (224)
                      ....++||+.++|+.|+   ++++|+||++...+...++++|+.++|+.+++++++...                     
T Consensus       101 ~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~---------------------  159 (237)
T 4ex6_A          101 GPRLLYPGVLEGLDRLSAAGFRLAMATSKVEKAARAIAELTGLDTRLTVIAGDDSVERG---------------------  159 (237)
T ss_dssp             GGGGBCTTHHHHHHHHHHTTEEEEEECSSCHHHHHHHHHHHTGGGTCSEEECTTTSSSC---------------------
T ss_pred             cCCccCCCHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCchhheeeEEeCCCCCCC---------------------
Confidence            34678999999999996   678899999999999999999999999999999988764                     


Q ss_pred             cCCCCHHHHHHHHHHhCCCCCcEEEEeCChhcHHHHHHcCCeEEEECCCCC------CCCCceEeCCHhHHHHHHHH
Q 027403          130 LCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP------VPPADHALNSIHNIKEAIPE  200 (224)
Q Consensus       130 ~~KP~~~~~~~al~~~~~~~~~~l~VgDs~~Di~~A~~~G~~~v~v~~~~~------~~~~d~~i~~~~dl~~~i~~  200 (224)
                        ||++.+|..+++++|++|++|++|||+.+|+.+|+++|+.+++|.++..      ...++++++++.||.++|.+
T Consensus       160 --kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~ad~v~~~~~el~~~l~~  234 (237)
T 4ex6_A          160 --KPHPDMALHVARGLGIPPERCVVIGDGVPDAEMGRAAGMTVIGVSYGVSGPDELMRAGADTVVDSFPAAVTAVLD  234 (237)
T ss_dssp             --TTSSHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHHTTCEEEEESSSSSCHHHHHHTTCSEEESSHHHHHHHHHH
T ss_pred             --CCCHHHHHHHHHHcCCCHHHeEEEcCCHHHHHHHHHCCCeEEEEecCCCCHHHHHhcCCCEEECCHHHHHHHHHc
Confidence              9999999999999999999999999999999999999999999998854      24799999999999988764

>1zrn_A L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseudomonas SP} SCOP: c.108.1.1 PDB: 1zrm_A 1jud_A 1qh9_A

Probab=99.80  E-value=4.2e-19  Score=146.21  Aligned_cols=125  Identities=18%  Similarity=0.286  Sum_probs=110.7

Q ss_pred             CCCCChhHHHHHhcCC---CCeEEEeCCChHHHHHHHHHcCCccccceeEeeccCCCCCCCCCCCCCcccccCCcccccc
Q 027403           54 KLKPDPVLRNLLLSMP---QRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRIL  130 (224)
Q Consensus        54 ~~~~~~g~~~~L~~l~---~~~~I~Tn~~~~~~~~~l~~lgl~~~fd~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  130 (224)
                      ...++||+.++|+.|+   ++++|+||++...+...++++|+.++|+.++++++....                      
T Consensus        93 ~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~----------------------  150 (232)
T 1zrn_A           93 RLAPFSEVPDSLRELKRRGLKLAILSNGSPQSIDAVVSHAGLRDGFDHLLSVDPVQVY----------------------  150 (232)
T ss_dssp             GCEECTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGCSEEEESGGGTCC----------------------
T ss_pred             cCCCCccHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHhcChHhhhheEEEecccCCC----------------------
Confidence            4678999999999886   678899999999999999999999999999999887764                      


Q ss_pred             CCCCHHHHHHHHHHhCCCCCcEEEEeCChhcHHHHHHcCCeEEEECCCCC-----CCCCceEeCCHhHHHHHHHHH
Q 027403          131 CKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP-----VPPADHALNSIHNIKEAIPEI  201 (224)
Q Consensus       131 ~KP~~~~~~~al~~~~~~~~~~l~VgDs~~Di~~A~~~G~~~v~v~~~~~-----~~~~d~~i~~~~dl~~~i~~~  201 (224)
                       ||+|.+|..+++++|++|++|++|||+.+|+.+|+++|+.++++.++..     ...++++++++.++.+++.+.
T Consensus       151 -Kp~~~~~~~~~~~~~~~~~~~~~iGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~~~l~~~  225 (232)
T 1zrn_A          151 -KPDNRVYELAEQALGLDRSAILFVASNAWDATGARYFGFPTCWINRTGNVFEEMGQTPDWEVTSLRAVVELFETA  225 (232)
T ss_dssp             -TTSHHHHHHHHHHHTSCGGGEEEEESCHHHHHHHHHHTCCEEEECTTCCCCCSSSCCCSEEESSHHHHHTTC---
T ss_pred             -CCCHHHHHHHHHHcCCCcccEEEEeCCHHHHHHHHHcCCEEEEEcCCCCCccccCCCCCEEECCHHHHHHHHHhh
Confidence             9999999999999999999999999999999999999999999988643     245899999999998876554

>2hdo_A Phosphoglycolate phosphatase; NP_784602.1, structur genomics, PSI-2, protein structure initiative, joint center structural genomics; HET: MSE; 1.50A {Lactobacillus plantarum} SCOP: c.108.1.6

Probab=99.80  E-value=1.4e-19  Score=147.03  Aligned_cols=123  Identities=20%  Similarity=0.230  Sum_probs=109.5

Q ss_pred             CCCCCChhHHHHHhcCC--CCeEEEeCCChHHHHHHHHHcCCccccceeEeeccCCCCCCCCCCCCCcccccCCcccccc
Q 027403           53 EKLKPDPVLRNLLLSMP--QRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRIL  130 (224)
Q Consensus        53 ~~~~~~~g~~~~L~~l~--~~~~I~Tn~~~~~~~~~l~~lgl~~~fd~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  130 (224)
                      ....++||+.++|+.++  ++++|+||++...+...++++|+.++|+.++++++.+..                      
T Consensus        80 ~~~~~~~~~~~~l~~l~~~~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~----------------------  137 (209)
T 2hdo_A           80 DQIELYPGITSLFEQLPSELRLGIVTSQRRNELESGMRSYPFMMRMAVTISADDTPKR----------------------  137 (209)
T ss_dssp             GGCEECTTHHHHHHHSCTTSEEEEECSSCHHHHHHHHTTSGGGGGEEEEECGGGSSCC----------------------
T ss_pred             ccCCcCCCHHHHHHHHHhcCcEEEEeCCCHHHHHHHHHHcChHhhccEEEecCcCCCC----------------------
Confidence            45678999999999997  578899999999999999999999999999999887764                      


Q ss_pred             CCCCHHHHHHHHHHhCCCCCcEEEEeCChhcHHHHHHcCCeEEEECCCCC----CCCCceEeCCHhHHHHHH
Q 027403          131 CKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP----VPPADHALNSIHNIKEAI  198 (224)
Q Consensus       131 ~KP~~~~~~~al~~~~~~~~~~l~VgDs~~Di~~A~~~G~~~v~v~~~~~----~~~~d~~i~~~~dl~~~i  198 (224)
                       ||++.+|..+++++|++|++|++|||+.+|+.+|+++|+.++++.++..    ...+++++.++.+|.+++
T Consensus       138 -KP~~~~~~~~~~~~~~~~~~~i~vGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~a~~~~~~~~el~~~l  208 (209)
T 2hdo_A          138 -KPDPLPLLTALEKVNVAPQNALFIGDSVSDEQTAQAANVDFGLAVWGMDPNADHQKVAHRFQKPLDILELF  208 (209)
T ss_dssp             -TTSSHHHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEEGGGCCTTGGGSCCSEEESSGGGGGGGC
T ss_pred             -CCCcHHHHHHHHHcCCCcccEEEECCChhhHHHHHHcCCeEEEEcCCCCChhhhccCCEEeCCHHHHHHhh
Confidence             9999999999999999999999999999999999999999999986643    122899999999987643

>4eek_A Beta-phosphoglucomutase-related protein; hydrolase, magnesium binding site, enzyme function initiativ; 1.60A {Deinococcus radiodurans} PDB: 4eel_A* 4een_A

Probab=99.80  E-value=3.3e-19  Score=149.69  Aligned_cols=125  Identities=18%  Similarity=0.089  Sum_probs=114.0

Q ss_pred             CCCCCChhHHHHHhcCC---CCeEEEeCCChHHHHHHHHHcCCccccce-eEeeccCC-CCCCCCCCCCCcccccCCccc
Q 027403           53 EKLKPDPVLRNLLLSMP---QRKIIFTNADQKHAMEVLGRLGLEDCFEG-IICFETIN-PRLQPADNTDGIENNSFSSNQ  127 (224)
Q Consensus        53 ~~~~~~~g~~~~L~~l~---~~~~I~Tn~~~~~~~~~l~~lgl~~~fd~-ii~~~~~~-~~~~~~~~~~~~~~~~~~~~~  127 (224)
                      ....++||+.++|+.|+   ++++|+||++...+...++++|+.++|+. ++++++++ ..                   
T Consensus       107 ~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~i~~~~~~~~~~-------------------  167 (259)
T 4eek_A          107 TGVTAIEGAAETLRALRAAGVPFAIGSNSERGRLHLKLRVAGLTELAGEHIYDPSWVGGRG-------------------  167 (259)
T ss_dssp             TTCEECTTHHHHHHHHHHHTCCEEEECSSCHHHHHHHHHHTTCHHHHCSCEECGGGGTTCC-------------------
T ss_pred             ccCCcCccHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHhcChHhhccceEEeHhhcCcCC-------------------
Confidence            45789999999999995   78999999999999999999999999999 99998887 64                   


Q ss_pred             cccCCCCHHHHHHHHHHhCCCCCcEEEEeCChhcHHHHHHcCCeEEEECCCCCC----------CCCceEeCCHhHHHHH
Q 027403          128 RILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVPV----------PPADHALNSIHNIKEA  197 (224)
Q Consensus       128 ~~~~KP~~~~~~~al~~~~~~~~~~l~VgDs~~Di~~A~~~G~~~v~v~~~~~~----------~~~d~~i~~~~dl~~~  197 (224)
                          ||++.+|..+++++|++|++|++|||+.+|+.+|+++|+.++++.++...          .++|++++++.||.++
T Consensus       168 ----Kp~~~~~~~~~~~lgi~~~~~i~iGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~~~~~ad~vi~~l~el~~~  243 (259)
T 4eek_A          168 ----KPHPDLYTFAAQQLGILPERCVVIEDSVTGGAAGLAAGATLWGLLVPGHPHPDGAAALSRLGAARVLTSHAELRAA  243 (259)
T ss_dssp             ----TTSSHHHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEECCTTSCCSSCHHHHHHHTCSEEECSHHHHHHH
T ss_pred             ----CCChHHHHHHHHHcCCCHHHEEEEcCCHHHHHHHHHCCCEEEEEccCCCcccccHHHHHhcCcchhhCCHHHHHHH
Confidence                99999999999999999999999999999999999999999999887432          4589999999999998


Q ss_pred             HHH
Q 027403          198 IPE  200 (224)
Q Consensus       198 i~~  200 (224)
                      |.+
T Consensus       244 l~~  246 (259)
T 4eek_A          244 LAE  246 (259)
T ss_dssp             HHH
T ss_pred             HHh
Confidence            865

>3sd7_A Putative phosphatase; structural genomics, haloacid dehalogenase-like hydrolase, H center for structural genomics of infectious diseases; HET: PGE; 1.70A {Clostridium difficile}

Probab=99.80  E-value=2.6e-19  Score=148.42  Aligned_cols=123  Identities=18%  Similarity=0.195  Sum_probs=113.0

Q ss_pred             CCCCCChhHHHHHhcCC---CCeEEEeCCChHHHHHHHHHcCCccccceeEeeccCCCCCCCCCCCCCcccccCCccccc
Q 027403           53 EKLKPDPVLRNLLLSMP---QRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRI  129 (224)
Q Consensus        53 ~~~~~~~g~~~~L~~l~---~~~~I~Tn~~~~~~~~~l~~lgl~~~fd~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  129 (224)
                      ....++||+.++|+.|+   .+++|+||++...+...++.+|+.++|+.++++++.+..                     
T Consensus       107 ~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~---------------------  165 (240)
T 3sd7_A          107 FENKIYENMKEILEMLYKNGKILLVATSKPTVFAETILRYFDIDRYFKYIAGSNLDGTR---------------------  165 (240)
T ss_dssp             GCCEECTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCGGGCSEEEEECTTSCC---------------------
T ss_pred             cccccCccHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHcCcHhhEEEEEeccccCCC---------------------
Confidence            34679999999999996   678899999999999999999999999999999988764                     


Q ss_pred             cCCCCHHHHHHHHHHhCCC-CCcEEEEeCChhcHHHHHHcCCeEEEECCCCC------CCCCceEeCCHhHHHHHH
Q 027403          130 LCKPSLEAIETAIRIANVD-PKKTIFFDDSARNIASAKAAGLHTVIVGSSVP------VPPADHALNSIHNIKEAI  198 (224)
Q Consensus       130 ~~KP~~~~~~~al~~~~~~-~~~~l~VgDs~~Di~~A~~~G~~~v~v~~~~~------~~~~d~~i~~~~dl~~~i  198 (224)
                        ||++.+|..+++++|++ |++|++|||+.+|+.+|+++|+.++++.++..      ...++++++++.||.++|
T Consensus       166 --kp~~~~~~~~~~~~g~~~~~~~i~vGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~ad~v~~~~~el~~~l  239 (240)
T 3sd7_A          166 --VNKNEVIQYVLDLCNVKDKDKVIMVGDRKYDIIGAKKIGIDSIGVLYGYGSFEEISESEPTYIVENVESIKDIL  239 (240)
T ss_dssp             --CCHHHHHHHHHHHHTCCCGGGEEEEESSHHHHHHHHHHTCEEEEESSSSCCHHHHHHHCCSEEESSSTTHHHHH
T ss_pred             --CCCHHHHHHHHHHcCCCCCCcEEEECCCHHHHHHHHHCCCCEEEEeCCCCCHHHHhhcCCCEEECCHHHHHHHh
Confidence              99999999999999999 99999999999999999999999999998764      256999999999999876

>3qnm_A Haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 1.70A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0

Probab=99.80  E-value=1.2e-18  Score=142.97  Aligned_cols=123  Identities=17%  Similarity=0.249  Sum_probs=112.4

Q ss_pred             CCCCCChhHHHHHhcCC--CCeEEEeCCChHHHHHHHHHcCCccccceeEeeccCCCCCCCCCCCCCcccccCCcccccc
Q 027403           53 EKLKPDPVLRNLLLSMP--QRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRIL  130 (224)
Q Consensus        53 ~~~~~~~g~~~~L~~l~--~~~~I~Tn~~~~~~~~~l~~lgl~~~fd~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  130 (224)
                      ....++|++.++|+.++  ++++|+||++...+...++.+|+.++|+.++++++.+..                      
T Consensus       104 ~~~~~~~~~~~~l~~l~~g~~~~i~sn~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~----------------------  161 (240)
T 3qnm_A          104 TKSGLMPHAKEVLEYLAPQYNLYILSNGFRELQSRKMRSAGVDRYFKKIILSEDLGVL----------------------  161 (240)
T ss_dssp             GCCCBSTTHHHHHHHHTTTSEEEEEECSCHHHHHHHHHHHTCGGGCSEEEEGGGTTCC----------------------
T ss_pred             hcCCcCccHHHHHHHHHcCCeEEEEeCCchHHHHHHHHHcChHhhceeEEEeccCCCC----------------------
Confidence            34789999999999987  678899999999999999999999999999999988774                      


Q ss_pred             CCCCHHHHHHHHHHhCCCCCcEEEEeCCh-hcHHHHHHcCCeEEEECCCCC---CCCCceEeCCHhHHHHHH
Q 027403          131 CKPSLEAIETAIRIANVDPKKTIFFDDSA-RNIASAKAAGLHTVIVGSSVP---VPPADHALNSIHNIKEAI  198 (224)
Q Consensus       131 ~KP~~~~~~~al~~~~~~~~~~l~VgDs~-~Di~~A~~~G~~~v~v~~~~~---~~~~d~~i~~~~dl~~~i  198 (224)
                       ||++.+|..+++++|++|++|++|||+. +|+.+|+++|+.++++.++..   ...+|++++|+.|+.++.
T Consensus       162 -kp~~~~~~~~~~~lgi~~~~~~~iGD~~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~d~vi~sl~e~~~~~  232 (240)
T 3qnm_A          162 -KPRPEIFHFALSATQSELRESLMIGDSWEADITGAHGVGMHQAFYNVTERTVFPFQPTYHIHSLKELMNLL  232 (240)
T ss_dssp             -TTSHHHHHHHHHHTTCCGGGEEEEESCTTTTHHHHHHTTCEEEEECCSCCCCCSSCCSEEESSTHHHHHHT
T ss_pred             -CCCHHHHHHHHHHcCCCcccEEEECCCchHhHHHHHHcCCeEEEEcCCCCCCcCCCCceEECCHHHHHHHH
Confidence             9999999999999999999999999996 999999999999999998863   456999999999998754

>2hoq_A Putative HAD-hydrolase PH1655; haloacid dehalogenase, structural genomics, NPPSFA, national on protein structural and functional analyses; 1.70A {Pyrococcus horikoshii}

Probab=99.80  E-value=6.4e-19  Score=146.66  Aligned_cols=124  Identities=24%  Similarity=0.361  Sum_probs=112.1

Q ss_pred             CCCCChhHHHHHhcCC---CCeEEEeCCChHHHHHHHHHcCCccccceeEeeccCCCCCCCCCCCCCcccccCCcccccc
Q 027403           54 KLKPDPVLRNLLLSMP---QRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRIL  130 (224)
Q Consensus        54 ~~~~~~g~~~~L~~l~---~~~~I~Tn~~~~~~~~~l~~lgl~~~fd~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  130 (224)
                      ...++||+.++|+.|+   ++++|+||++...+...++++|+.++|+.++++++++..                      
T Consensus        92 ~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~----------------------  149 (241)
T 2hoq_A           92 YLREVPGARKVLIRLKELGYELGIITDGNPVKQWEKILRLELDDFFEHVIISDFEGVK----------------------  149 (241)
T ss_dssp             HCCBCTTHHHHHHHHHHHTCEEEEEECSCHHHHHHHHHHTTCGGGCSEEEEGGGGTCC----------------------
T ss_pred             hCCCCccHHHHHHHHHHCCCEEEEEECCCchhHHHHHHHcCcHhhccEEEEeCCCCCC----------------------
Confidence            3578999999999986   678999999999999999999999999999999988764                      


Q ss_pred             CCCCHHHHHHHHHHhCCCCCcEEEEeCCh-hcHHHHHHcCCeEEEECCCCC----C---CCCceEeCCHhHHHHHHHH
Q 027403          131 CKPSLEAIETAIRIANVDPKKTIFFDDSA-RNIASAKAAGLHTVIVGSSVP----V---PPADHALNSIHNIKEAIPE  200 (224)
Q Consensus       131 ~KP~~~~~~~al~~~~~~~~~~l~VgDs~-~Di~~A~~~G~~~v~v~~~~~----~---~~~d~~i~~~~dl~~~i~~  200 (224)
                       ||+|.+|..+++++|++|++|++|||+. +|+.+|+++|+.++++.++..    .   ..++++++++.+|.+++.+
T Consensus       150 -Kp~~~~~~~~~~~~g~~~~~~i~iGD~~~~Di~~a~~aG~~~~~v~~g~~~~~~~~~~~~~~~~i~~~~el~~~l~~  226 (241)
T 2hoq_A          150 -KPHPKIFKKALKAFNVKPEEALMVGDRLYSDIYGAKRVGMKTVWFRYGKHSERELEYRKYADYEIDNLESLLEVLAR  226 (241)
T ss_dssp             -TTCHHHHHHHHHHHTCCGGGEEEEESCTTTTHHHHHHTTCEEEEECCSCCCHHHHTTGGGCSEEESSTTHHHHHHHH
T ss_pred             -CCCHHHHHHHHHHcCCCcccEEEECCCchHhHHHHHHCCCEEEEECCCCCCcccccccCCCCEEECCHHHHHHHHHH
Confidence             9999999999999999999999999998 999999999999999987753    1   2689999999999987754

>3nas_A Beta-PGM, beta-phosphoglucomutase; PSI, structural genomics, protein structure initiative, NEW research center for structural genomics; 3.00A {Bacillus subtilis}

Probab=99.79  E-value=2.4e-19  Score=147.54  Aligned_cols=116  Identities=24%  Similarity=0.333  Sum_probs=93.3

Q ss_pred             CCCChhHHHHHhcCC---CCeEEEeCCChHHHHHHHHHcCCccccceeEeeccCCCCCCCCCCCCCcccccCCccccccC
Q 027403           55 LKPDPVLRNLLLSMP---QRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILC  131 (224)
Q Consensus        55 ~~~~~g~~~~L~~l~---~~~~I~Tn~~~~~~~~~l~~lgl~~~fd~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  131 (224)
                      ..++||+.++|+.|+   .+++|+||++.  +...++++|+.++|+.+++++++...                       
T Consensus        91 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~--~~~~l~~~gl~~~f~~i~~~~~~~~~-----------------------  145 (233)
T 3nas_A           91 EDLLPGIGRLLCQLKNENIKIGLASSSRN--APKILRRLAIIDDFHAIVDPTTLAKG-----------------------  145 (233)
T ss_dssp             GGSCTTHHHHHHHHHHTTCEEEECCSCTT--HHHHHHHTTCTTTCSEECCC-----------------------------
T ss_pred             CCcCcCHHHHHHHHHHCCCcEEEEcCchh--HHHHHHHcCcHhhcCEEeeHhhCCCC-----------------------
Confidence            348999999999986   67889999865  78899999999999999999888764                       


Q ss_pred             CCCHHHHHHHHHHhCCCCCcEEEEeCChhcHHHHHHcCCeEEEECCCCCCCCCceEeCCHhHHH
Q 027403          132 KPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVPVPPADHALNSIHNIK  195 (224)
Q Consensus       132 KP~~~~~~~al~~~~~~~~~~l~VgDs~~Di~~A~~~G~~~v~v~~~~~~~~~d~~i~~~~dl~  195 (224)
                      ||+|.+|..+++++|++|++|++|||+.+|+.+|+++|+.+++++++.....++++++++.++.
T Consensus       146 Kp~~~~~~~~~~~lgi~~~~~i~vGDs~~Di~~a~~aG~~~~~~~~~~~~~~ad~v~~s~~el~  209 (233)
T 3nas_A          146 KPDPDIFLTAAAMLDVSPADCAAIEDAEAGISAIKSAGMFAVGVGQGQPMLGADLVVRQTSDLT  209 (233)
T ss_dssp             ---CCHHHHHHHHHTSCGGGEEEEECSHHHHHHHHHTTCEEEECC-------CSEECSSGGGCC
T ss_pred             CCChHHHHHHHHHcCCCHHHEEEEeCCHHHHHHHHHcCCEEEEECCccccccCCEEeCChHhCC
Confidence            9999999999999999999999999999999999999999999987765558999999999886

>2w43_A Hypothetical 2-haloalkanoic acid dehalogenase; hydrolase, metabolic process; HET: MES; 1.66A {Sulfolobus tokodaii} PDB: 2w11_A

Probab=99.79  E-value=9.8e-19  Score=141.74  Aligned_cols=120  Identities=22%  Similarity=0.283  Sum_probs=108.2

Q ss_pred             CCCChhHHHHHhcCC--CCeEEEeCCChHHHHHHHHHcCCccccceeEeeccCCCCCCCCCCCCCcccccCCccccccCC
Q 027403           55 LKPDPVLRNLLLSMP--QRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCK  132 (224)
Q Consensus        55 ~~~~~g~~~~L~~l~--~~~~I~Tn~~~~~~~~~l~~lgl~~~fd~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~K  132 (224)
                      ..++||+.+ |+.|+  ++++|+||++...+...++++|+.++|+.++++++....                       |
T Consensus        73 ~~~~~~~~~-l~~l~~~~~~~i~t~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~-----------------------K  128 (201)
T 2w43_A           73 LKAYEDTKY-LKEISEIAEVYALSNGSINEVKQHLERNGLLRYFKGIFSAESVKEY-----------------------K  128 (201)
T ss_dssp             CEECGGGGG-HHHHHHHSEEEEEESSCHHHHHHHHHHTTCGGGCSEEEEGGGGTCC-----------------------T
T ss_pred             cccCCChHH-HHHHHhCCeEEEEeCcCHHHHHHHHHHCCcHHhCcEEEehhhcCCC-----------------------C
Confidence            678899988 88876  788999999999999999999999999999999887764                       9


Q ss_pred             CCHHHHHHHHHHhCCCCCcEEEEeCChhcHHHHHHcCCeEEEECCCCC-----CCCCceEeCCHhHHHHHHHH
Q 027403          133 PSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP-----VPPADHALNSIHNIKEAIPE  200 (224)
Q Consensus       133 P~~~~~~~al~~~~~~~~~~l~VgDs~~Di~~A~~~G~~~v~v~~~~~-----~~~~d~~i~~~~dl~~~i~~  200 (224)
                      |+|.+|..+++++|  |++|++|||+.+|+.+|+++|+.++++.++..     ...++++++++.+|.+++.+
T Consensus       129 p~~~~~~~~~~~~~--~~~~~~vGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~~~l~~  199 (201)
T 2w43_A          129 PSPKVYKYFLDSIG--AKEAFLVSSNAFDVIGAKNAGMRSIFVNRKNTIVDPIGGKPDVIVNDFKELYEWILR  199 (201)
T ss_dssp             TCHHHHHHHHHHHT--CSCCEEEESCHHHHHHHHHTTCEEEEECSSSCCCCTTSCCCSEEESSHHHHHHHHHH
T ss_pred             CCHHHHHHHHHhcC--CCcEEEEeCCHHHhHHHHHCCCEEEEECCCCCCccccCCCCCEEECCHHHHHHHHHh
Confidence            99999999999999  99999999999999999999999999988643     23589999999999987754

>3l5k_A Protein GS1, haloacid dehalogenase-like hydrolase domain- containing protein 1A; HDHD1A, haloacid dehalogenase-like hydrolase domain containing 1A; 2.00A {Homo sapiens}

Probab=99.79  E-value=1.5e-19  Score=151.01  Aligned_cols=145  Identities=17%  Similarity=0.231  Sum_probs=118.2

Q ss_pred             HccCCCCHHHHHHHHhccCC--CCCCCCChhHHHHHhcCC---CCeEEEeCCChHHHHHHHHH-cCCccccceeEeec--
Q 027403           32 AVGYEFDNDEFHAFVHGKLP--YEKLKPDPVLRNLLLSMP---QRKIIFTNADQKHAMEVLGR-LGLEDCFEGIICFE--  103 (224)
Q Consensus        32 ~~~~~~~~~~~~~~~~~~~~--~~~~~~~~g~~~~L~~l~---~~~~I~Tn~~~~~~~~~l~~-lgl~~~fd~ii~~~--  103 (224)
                      .++...+.+++...+.....  .....++||+.++|+.|+   ++++|+||++...+...+.. +|+.++|+.+++++  
T Consensus        86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~sn~~~~~~~~~l~~~~~l~~~f~~~~~~~~~  165 (250)
T 3l5k_A           86 VLQLPMSKEELVEESQTKLKEVFPTAALMPGAEKLIIHLRKHGIPFALATSSRSASFDMKTSRHKEFFSLFSHIVLGDDP  165 (250)
T ss_dssp             HHTCSSCHHHHHHHHHHHHHHHGGGCCBCTTHHHHHHHHHHTTCCEEEECSCCHHHHHHHTTTCHHHHTTSSCEECTTCT
T ss_pred             HhCCCCCHHHHHHHHHHHHHHHhccCCCCCCHHHHHHHHHhCCCcEEEEeCCCHHHHHHHHHhccCHHhheeeEEecchh
Confidence            34555566555544433211  234789999999999986   78999999998888777755 58889999999988  


Q ss_pred             cCCCCCCCCCCCCCcccccCCccccccCCCCHHHHHHHHHHhCCCC--CcEEEEeCChhcHHHHHHcCCeEEEECCCCC-
Q 027403          104 TINPRLQPADNTDGIENNSFSSNQRILCKPSLEAIETAIRIANVDP--KKTIFFDDSARNIASAKAAGLHTVIVGSSVP-  180 (224)
Q Consensus       104 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~~~~~~~al~~~~~~~--~~~l~VgDs~~Di~~A~~~G~~~v~v~~~~~-  180 (224)
                      ++...                       ||+|.+|..+++++|++|  ++|++|||+.+|+.+|+++|+.++++.++.. 
T Consensus       166 ~~~~~-----------------------Kp~~~~~~~~~~~lgi~~~~~~~i~iGD~~~Di~~a~~aG~~~i~v~~~~~~  222 (250)
T 3l5k_A          166 EVQHG-----------------------KPDPDIFLACAKRFSPPPAMEKCLVFEDAPNGVEAALAAGMQVVMVPDGNLS  222 (250)
T ss_dssp             TCCSC-----------------------TTSTHHHHHHHHTSSSCCCGGGEEEEESSHHHHHHHHHTTCEEEECCCTTSC
T ss_pred             hccCC-----------------------CCChHHHHHHHHHcCCCCCcceEEEEeCCHHHHHHHHHcCCEEEEEcCCCCc
Confidence            77664                       999999999999999988  9999999999999999999999999998863 


Q ss_pred             ---CCCCceEeCCHhHHHHHHH
Q 027403          181 ---VPPADHALNSIHNIKEAIP  199 (224)
Q Consensus       181 ---~~~~d~~i~~~~dl~~~i~  199 (224)
                         ...+|++++++.||...+.
T Consensus       223 ~~~~~~ad~v~~sl~el~~~l~  244 (250)
T 3l5k_A          223 RDLTTKATLVLNSLQDFQPELF  244 (250)
T ss_dssp             GGGSTTSSEECSCGGGCCGGGG
T ss_pred             hhhcccccEeecCHHHhhHHHh
Confidence               4679999999999876554

>2oda_A Hypothetical protein pspto_2114; haloacid dehalogenase, phosphonoacetaldehyde hydrolase, protein binding; HET: EPE; 1.90A {Pseudomonas syringae PV}

Probab=99.79  E-value=1.3e-18  Score=143.76  Aligned_cols=121  Identities=15%  Similarity=0.151  Sum_probs=104.5

Q ss_pred             CCCChhHHHHHhcCC---CCeEEEeCCChHHHHHHHHHcCCccccceeEeeccCCCCCCCCCCCCCcccccCCccccccC
Q 027403           55 LKPDPVLRNLLLSMP---QRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILC  131 (224)
Q Consensus        55 ~~~~~g~~~~L~~l~---~~~~I~Tn~~~~~~~~~l~~lgl~~~fd~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  131 (224)
                      ..++||+.++|+.|+   ++++|+||++...+...+   +  .+|+.+++++++...                       
T Consensus        35 ~~~~pg~~e~L~~L~~~g~~~~i~T~~~~~~~~~~~---~--~~~d~v~~~~~~~~~-----------------------   86 (196)
T 2oda_A           35 AQLTPGAQNALKALRDQGMPCAWIDELPEALSTPLA---A--PVNDWMIAAPRPTAG-----------------------   86 (196)
T ss_dssp             GSBCTTHHHHHHHHHHHTCCEEEECCSCHHHHHHHH---T--TTTTTCEECCCCSSC-----------------------
T ss_pred             CCcCcCHHHHHHHHHHCCCEEEEEcCChHHHHHHhc---C--ccCCEEEECCcCCCC-----------------------
Confidence            578999999999996   789999999988774433   3  478999999988764                       


Q ss_pred             CCCHHHHHHHHHHhCCCC-CcEEEEeCChhcHHHHHHcCCeEEEECCCCC-----------------------------C
Q 027403          132 KPSLEAIETAIRIANVDP-KKTIFFDDSARNIASAKAAGLHTVIVGSSVP-----------------------------V  181 (224)
Q Consensus       132 KP~~~~~~~al~~~~~~~-~~~l~VgDs~~Di~~A~~~G~~~v~v~~~~~-----------------------------~  181 (224)
                      ||+|++|..+++++++.+ ++|+||||+.+||++|+++|+.+|++.++..                             .
T Consensus        87 KP~p~~~~~a~~~l~~~~~~~~v~VGDs~~Di~aA~~aG~~~i~v~~g~~~~~~~~~~~~~~~~~e~~~~~~~~~~~l~~  166 (196)
T 2oda_A           87 WPQPDACWMALMALNVSQLEGCVLISGDPRLLQSGLNAGLWTIGLASCGPLCGLSPSQWQALNNAEREQRRAQATLKLYS  166 (196)
T ss_dssp             TTSTHHHHHHHHHTTCSCSTTCEEEESCHHHHHHHHHHTCEEEEESSSSTTTCCCHHHHHHSCHHHHHHHHHHHHHHHHH
T ss_pred             CCChHHHHHHHHHcCCCCCccEEEEeCCHHHHHHHHHCCCEEEEEccCCccccccHHHhhhcchhhhhhhHHHHHHHHHH
Confidence            999999999999999975 8999999999999999999999999998753                             1


Q ss_pred             CCCceEeCCHhHHHHHHHHHHh
Q 027403          182 PPADHALNSIHNIKEAIPEIWE  203 (224)
Q Consensus       182 ~~~d~~i~~~~dl~~~i~~~~~  203 (224)
                      .+++++++++.||.+++..+.+
T Consensus       167 ~~~d~vi~~~~eL~~~l~~~~~  188 (196)
T 2oda_A          167 LGVHSVIDHLGELESCLADIAL  188 (196)
T ss_dssp             TTCSEEESSGGGHHHHHHHHHH
T ss_pred             cCCCEEeCCHHHHHHHHHHHHH
Confidence            4689999999999998876543

>3iru_A Phoshonoacetaldehyde hydrolase like protein; phosphonoacetaldehyde hydrolase like P structural genomics, PSI-2, protein structure initiative; 2.30A {Oleispira antarctica} SCOP: c.108.1.0

Probab=99.78  E-value=6.3e-19  Score=148.07  Aligned_cols=126  Identities=14%  Similarity=0.060  Sum_probs=114.1

Q ss_pred             CCCCChhHHHHHhcCC---CCeEEEeCCChHHHHHHHHHcCCccc-cceeEeeccCCCCCCCCCCCCCcccccCCccccc
Q 027403           54 KLKPDPVLRNLLLSMP---QRKIIFTNADQKHAMEVLGRLGLEDC-FEGIICFETINPRLQPADNTDGIENNSFSSNQRI  129 (224)
Q Consensus        54 ~~~~~~g~~~~L~~l~---~~~~I~Tn~~~~~~~~~l~~lgl~~~-fd~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  129 (224)
                      ...++||+.++|+.|+   ++++|+||++...+...++.+|+.++ |+.+++++++...                     
T Consensus       109 ~~~~~~~~~~~l~~l~~~g~~~~i~tn~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~---------------------  167 (277)
T 3iru_A          109 RSQLIPGWKEVFDKLIAQGIKVGGNTGYGPGMMAPALIAAKEQGYTPASTVFATDVVRG---------------------  167 (277)
T ss_dssp             TCCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHHHTTCCCSEEECGGGSSSC---------------------
T ss_pred             cCccCcCHHHHHHHHHHcCCeEEEEeCCchHHHHHHHHhcCcccCCCceEecHHhcCCC---------------------
Confidence            3678999999999886   67899999999999999999998888 9999999988764                     


Q ss_pred             cCCCCHHHHHHHHHHhCCCC-CcEEEEeCChhcHHHHHHcCCeEEEECCCCC----------------------------
Q 027403          130 LCKPSLEAIETAIRIANVDP-KKTIFFDDSARNIASAKAAGLHTVIVGSSVP----------------------------  180 (224)
Q Consensus       130 ~~KP~~~~~~~al~~~~~~~-~~~l~VgDs~~Di~~A~~~G~~~v~v~~~~~----------------------------  180 (224)
                        ||++.+|..+++++|++| ++|++|||+.+|+.+|+++|+.+++|.+|..                            
T Consensus       168 --kp~~~~~~~~~~~lgi~~~~~~i~vGD~~~Di~~a~~aG~~~v~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  245 (277)
T 3iru_A          168 --RPFPDMALKVALELEVGHVNGCIKVDDTLPGIEEGLRAGMWTVGVSCSGNEVGLDREDWQALSSDEQQSYRQHAEQRL  245 (277)
T ss_dssp             --TTSSHHHHHHHHHHTCSCGGGEEEEESSHHHHHHHHHTTCEEEEECSSSTTTCCCHHHHHHSCHHHHHHHHHHHHHHH
T ss_pred             --CCCHHHHHHHHHHcCCCCCccEEEEcCCHHHHHHHHHCCCeEEEEecCCcccccchhhhhhcchhhhhhhhhhhHHHH
Confidence              999999999999999999 9999999999999999999999999999852                            


Q ss_pred             -CCCCceEeCCHhHHHHHHHHHH
Q 027403          181 -VPPADHALNSIHNIKEAIPEIW  202 (224)
Q Consensus       181 -~~~~d~~i~~~~dl~~~i~~~~  202 (224)
                       ..++|++++++.+|.++|.++-
T Consensus       246 ~~~~ad~v~~~~~el~~~l~~~~  268 (277)
T 3iru_A          246 FNAGAHYVIDSVADLETVITDVN  268 (277)
T ss_dssp             HHHTCSEEESSGGGTHHHHHHHH
T ss_pred             hhCCCCEEecCHHHHHHHHHHHH
Confidence             2459999999999999887653

>3m9l_A Hydrolase, haloacid dehalogenase-like family; HAD family hydrolase, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Pseudomonas fluorescens} PDB: 2ybd_A* 3r09_A*

Probab=99.78  E-value=1.1e-18  Score=141.77  Aligned_cols=123  Identities=21%  Similarity=0.333  Sum_probs=110.0

Q ss_pred             CCCCChhHHHHHhcCC---CCeEEEeCCChHHHHHHHHHcCCcccc--ceeEeeccCCCCCCCCCCCCCcccccCCcccc
Q 027403           54 KLKPDPVLRNLLLSMP---QRKIIFTNADQKHAMEVLGRLGLEDCF--EGIICFETINPRLQPADNTDGIENNSFSSNQR  128 (224)
Q Consensus        54 ~~~~~~g~~~~L~~l~---~~~~I~Tn~~~~~~~~~l~~lgl~~~f--d~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~  128 (224)
                      ...++||+.++|+.|+   ++++|+||++...+...++.+|+.++|  +.+++++. ..                     
T Consensus        68 ~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~~i~~~~~-~~---------------------  125 (205)
T 3m9l_A           68 GSRPAPGAVELVRELAGRGYRLGILTRNARELAHVTLEAIGLADCFAEADVLGRDE-AP---------------------  125 (205)
T ss_dssp             EEEECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGSCGGGEECTTT-SC---------------------
T ss_pred             cCCCCccHHHHHHHHHhcCCeEEEEeCCchHHHHHHHHHcCchhhcCcceEEeCCC-CC---------------------
Confidence            3578899999999986   678999999999999999999999999  77777666 44                     


Q ss_pred             ccCCCCHHHHHHHHHHhCCCCCcEEEEeCChhcHHHHHHcCCeEEEECCCCC--CCCCceEeCCHhHHHHHHHH
Q 027403          129 ILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP--VPPADHALNSIHNIKEAIPE  200 (224)
Q Consensus       129 ~~~KP~~~~~~~al~~~~~~~~~~l~VgDs~~Di~~A~~~G~~~v~v~~~~~--~~~~d~~i~~~~dl~~~i~~  200 (224)
                        +||++.+|..+++++|++|++|++|||+.+|+.+|+++|+.+|++.++..  ...+|++++++.||.+.++.
T Consensus       126 --~kp~~~~~~~~~~~~g~~~~~~i~iGD~~~Di~~a~~aG~~~i~v~~~~~~~~~~ad~v~~~~~el~~~~~~  197 (205)
T 3m9l_A          126 --PKPHPGGLLKLAEAWDVSPSRMVMVGDYRFDLDCGRAAGTRTVLVNLPDNPWPELTDWHARDCAQLRDLLSA  197 (205)
T ss_dssp             --CTTSSHHHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEECSSSSCSCGGGCSEECSSHHHHHHHHHH
T ss_pred             --CCCCHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHcCCEEEEEeCCCCcccccCCEEeCCHHHHHHHHHh
Confidence              39999999999999999999999999999999999999999999998865  34489999999999887754

>3umg_A Haloacid dehalogenase; defluorinase, hydrolase; 2.25A {Rhodococcus jostii}

Probab=99.78  E-value=3.1e-18  Score=141.50  Aligned_cols=123  Identities=16%  Similarity=0.213  Sum_probs=110.3

Q ss_pred             CCCCCChhHHHHHhcCC--CCeEEEeCCChHHHHHHHHHcCCccccceeEeeccCCCCCCCCCCCCCcccccCCcccccc
Q 027403           53 EKLKPDPVLRNLLLSMP--QRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRIL  130 (224)
Q Consensus        53 ~~~~~~~g~~~~L~~l~--~~~~I~Tn~~~~~~~~~l~~lgl~~~fd~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  130 (224)
                      ..+.++|++.++|+.++  ++++++||++...+...++.+|+.  |+.+++++++...                      
T Consensus       113 ~~~~~~~~~~~~l~~l~~~~~~~i~t~~~~~~~~~~l~~~~~~--f~~~~~~~~~~~~----------------------  168 (254)
T 3umg_A          113 HVLTPWPDSVPGLTAIKAEYIIGPLSNGNTSLLLDMAKNAGIP--WDVIIGSDINRKY----------------------  168 (254)
T ss_dssp             GSCCBCTTHHHHHHHHHHHSEEEECSSSCHHHHHHHHHHHTCC--CSCCCCHHHHTCC----------------------
T ss_pred             hhCcCCcCHHHHHHHHHhCCeEEEEeCCCHHHHHHHHHhCCCC--eeEEEEcCcCCCC----------------------
Confidence            45688999999999987  788999999999999999999986  9999999887764                      


Q ss_pred             CCCCHHHHHHHHHHhCCCCCcEEEEeCChhcHHHHHHcCCeEEEEC----CCC-------CCCCCceEeCCHhHHHHHHH
Q 027403          131 CKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVG----SSV-------PVPPADHALNSIHNIKEAIP  199 (224)
Q Consensus       131 ~KP~~~~~~~al~~~~~~~~~~l~VgDs~~Di~~A~~~G~~~v~v~----~~~-------~~~~~d~~i~~~~dl~~~i~  199 (224)
                       ||++.+|..+++++|++|++|++|||+.+|+.+|+++|+.++++.    +|.       ....+|++++|+.+|.++|.
T Consensus       169 -kp~~~~~~~~~~~lgi~~~~~~~iGD~~~Di~~a~~aG~~~~~~~~~~~~g~~~~~~~~~~~~~d~~~~~~~el~~~l~  247 (254)
T 3umg_A          169 -KPDPQAYLRTAQVLGLHPGEVMLAAAHNGDLEAAHATGLATAFILRPVEHGPHQTDDLAPTGSWDISATDITDLAAQLR  247 (254)
T ss_dssp             -TTSHHHHHHHHHHTTCCGGGEEEEESCHHHHHHHHHTTCEEEEECCTTTTCTTCCSCSSCSSCCSEEESSHHHHHHHHH
T ss_pred             -CCCHHHHHHHHHHcCCChHHEEEEeCChHhHHHHHHCCCEEEEEecCCcCCCCccccccccCCCceEECCHHHHHHHhc
Confidence             999999999999999999999999999999999999999999998    443       14568999999999998775


Q ss_pred             H
Q 027403          200 E  200 (224)
Q Consensus       200 ~  200 (224)
                      .
T Consensus       248 ~  248 (254)
T 3umg_A          248 A  248 (254)
T ss_dssp             H
T ss_pred             C
Confidence            4

>2om6_A Probable phosphoserine phosphatase; rossmann fold, B-hairpin, four-helix bundle, structural GENO NPPSFA; 2.20A {Pyrococcus horikoshii}

Probab=99.77  E-value=7.7e-18  Score=137.59  Aligned_cols=123  Identities=18%  Similarity=0.243  Sum_probs=110.2

Q ss_pred             CCChhHHHHHhcCC---CCeEEEeCCC---hHHHHHHHHHcCCccccceeEeeccCCCCCCCCCCCCCcccccCCccccc
Q 027403           56 KPDPVLRNLLLSMP---QRKIIFTNAD---QKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRI  129 (224)
Q Consensus        56 ~~~~g~~~~L~~l~---~~~~I~Tn~~---~~~~~~~l~~lgl~~~fd~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  129 (224)
                      .++|++.++|+.++   .+++++||++   ...+...++.+|+.++|+.++++++....                     
T Consensus        99 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~---------------------  157 (235)
T 2om6_A           99 LVLEGTKEALQFVKERGLKTAVIGNVMFWPGSYTRLLLERFGLMEFIDKTFFADEVLSY---------------------  157 (235)
T ss_dssp             GBCTTHHHHHHHHHHTTCEEEEEECCCSSCHHHHHHHHHHTTCGGGCSEEEEHHHHTCC---------------------
T ss_pred             CcCccHHHHHHHHHHCCCEEEEEcCCcccchhHHHHHHHhCCcHHHhhhheeccccCCC---------------------
Confidence            46999999999885   6788999999   88899999999999999999999887764                     


Q ss_pred             cCCCCHHHHHHHHHHhCCCCCcEEEEeCCh-hcHHHHHHcCCeEEEECCCCCC----CCCceEeCCHhHHHHHHHHH
Q 027403          130 LCKPSLEAIETAIRIANVDPKKTIFFDDSA-RNIASAKAAGLHTVIVGSSVPV----PPADHALNSIHNIKEAIPEI  201 (224)
Q Consensus       130 ~~KP~~~~~~~al~~~~~~~~~~l~VgDs~-~Di~~A~~~G~~~v~v~~~~~~----~~~d~~i~~~~dl~~~i~~~  201 (224)
                        ||+|.+|..+++++|++|++|++|||+. +|+.+|+++|+.++++.++...    ..++++++++.+|.+++.++
T Consensus       158 --kp~~~~~~~~~~~lgi~~~~~~~iGD~~~nDi~~a~~aG~~~~~~~~~~~~~~~~~~~~~~~~~~~el~~~l~~~  232 (235)
T 2om6_A          158 --KPRKEMFEKVLNSFEVKPEESLHIGDTYAEDYQGARKVGMWAVWINQEGDKVRKLEERGFEIPSIANLKDVIELI  232 (235)
T ss_dssp             --TTCHHHHHHHHHHTTCCGGGEEEEESCTTTTHHHHHHTTSEEEEECTTCCSCEEEETTEEEESSGGGHHHHHHHT
T ss_pred             --CCCHHHHHHHHHHcCCCccceEEECCChHHHHHHHHHCCCEEEEECCCCCCcccCCCCcchHhhHHHHHHHHHHH
Confidence              9999999999999999999999999999 9999999999999999887431    23789999999999887654

>1yns_A E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo sapiens} SCOP: c.108.1.22 PDB: 1zs9_A

Probab=99.77  E-value=1.3e-18  Score=149.07  Aligned_cols=117  Identities=13%  Similarity=0.148  Sum_probs=103.0

Q ss_pred             CCCCCChhHHHHHhcCC---CCeEEEeCCChHHHHHHHHHc---CCccccceeEeeccCCCCCCCCCCCCCcccccCCcc
Q 027403           53 EKLKPDPVLRNLLLSMP---QRKIIFTNADQKHAMEVLGRL---GLEDCFEGIICFETINPRLQPADNTDGIENNSFSSN  126 (224)
Q Consensus        53 ~~~~~~~g~~~~L~~l~---~~~~I~Tn~~~~~~~~~l~~l---gl~~~fd~ii~~~~~~~~~~~~~~~~~~~~~~~~~~  126 (224)
                      ....++||+.++|+.|+   ++++|+||++...+...++++   |+.++|+.++++ +++ .                  
T Consensus       127 ~~~~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~l~~~~~~~l~~~fd~i~~~-~~~-~------------------  186 (261)
T 1yns_A          127 MKAEFFADVVPAVRKWREAGMKVYIYSSGSVEAQKLLFGHSTEGDILELVDGHFDT-KIG-H------------------  186 (261)
T ss_dssp             CCBCCCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHTBTTBCCGGGCSEEECG-GGC-C------------------
T ss_pred             cccccCcCHHHHHHHHHhCCCeEEEEeCCCHHHHHHHHHhhcccChHhhccEEEec-CCC-C------------------
Confidence            35789999999999995   688999999999889888854   599999999988 666 5                  


Q ss_pred             ccccCCCCHHHHHHHHHHhCCCCCcEEEEeCChhcHHHHHHcCCeEEEECCCCCC------CCCceEeCCHhHH
Q 027403          127 QRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVPV------PPADHALNSIHNI  194 (224)
Q Consensus       127 ~~~~~KP~~~~~~~al~~~~~~~~~~l~VgDs~~Di~~A~~~G~~~v~v~~~~~~------~~~d~~i~~~~dl  194 (224)
                           ||+|.+|..+++++|++|++|+||||+.+|+.+|+++|++++++.++...      ..++++++|+.+|
T Consensus       187 -----KP~p~~~~~~~~~lg~~p~~~l~VgDs~~di~aA~~aG~~~i~v~~~~~~~~~~~~~~~~~~i~~l~el  255 (261)
T 1yns_A          187 -----KVESESYRKIADSIGCSTNNILFLTDVTREASAAEEADVHVAVVVRPGNAGLTDDEKTYYSLITSFSEL  255 (261)
T ss_dssp             -----TTCHHHHHHHHHHHTSCGGGEEEEESCHHHHHHHHHTTCEEEEECCTTCCCCCHHHHHHSCEESSGGGC
T ss_pred             -----CCCHHHHHHHHHHhCcCcccEEEEcCCHHHHHHHHHCCCEEEEEeCCCCCcccccccCCCEEECCHHHh
Confidence                 99999999999999999999999999999999999999999999875432      2368899998876

>3umc_A Haloacid dehalogenase; HY; 2.15A {Pseudomonas aeruginosa}

Probab=99.77  E-value=4.3e-18  Score=141.48  Aligned_cols=122  Identities=16%  Similarity=0.291  Sum_probs=109.1

Q ss_pred             CCCCCChhHHHHHhcCC--CCeEEEeCCChHHHHHHHHHcCCccccceeEeeccCCCCCCCCCCCCCcccccCCcccccc
Q 027403           53 EKLKPDPVLRNLLLSMP--QRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRIL  130 (224)
Q Consensus        53 ~~~~~~~g~~~~L~~l~--~~~~I~Tn~~~~~~~~~l~~lgl~~~fd~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  130 (224)
                      ..+.++|++.++|+.++  ++++|+||++...+...++.+|+.  |+.+++++.++..                      
T Consensus       117 ~~~~~~~~~~~~l~~l~~~~~~~i~s~~~~~~~~~~l~~~g~~--f~~~~~~~~~~~~----------------------  172 (254)
T 3umc_A          117 HRLRPWPDTLAGMHALKADYWLAALSNGNTALMLDVARHAGLP--WDMLLCADLFGHY----------------------  172 (254)
T ss_dssp             GSCEECTTHHHHHHHHTTTSEEEECCSSCHHHHHHHHHHHTCC--CSEECCHHHHTCC----------------------
T ss_pred             hcCCCCccHHHHHHHHHhcCeEEEEeCCCHHHHHHHHHHcCCC--cceEEeecccccC----------------------
Confidence            34678999999999997  678899999999999999999986  9999999887764                      


Q ss_pred             CCCCHHHHHHHHHHhCCCCCcEEEEeCChhcHHHHHHcCCeEEEEC----CCCC-------CCCCceEeCCHhHHHHHHH
Q 027403          131 CKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVG----SSVP-------VPPADHALNSIHNIKEAIP  199 (224)
Q Consensus       131 ~KP~~~~~~~al~~~~~~~~~~l~VgDs~~Di~~A~~~G~~~v~v~----~~~~-------~~~~d~~i~~~~dl~~~i~  199 (224)
                       ||++.+|..+++++|++|++|++|||+.+|+.+|+++|+.++++.    ++..       ...+|++++|+.+|.++|.
T Consensus       173 -kp~~~~~~~~~~~lgi~~~~~~~iGD~~~Di~~a~~aG~~~~~~~~~~~~g~~~~~~l~~~~~ad~v~~~l~el~~~l~  251 (254)
T 3umc_A          173 -KPDPQVYLGACRLLDLPPQEVMLCAAHNYDLKAARALGLKTAFIARPLEYGPGQSQDLAAEQDWDLIASDLLDLHRQLA  251 (254)
T ss_dssp             -TTSHHHHHHHHHHHTCCGGGEEEEESCHHHHHHHHHTTCEEEEECCTTTTCTTCCSSSSCSSCCSEEESSHHHHHHHHH
T ss_pred             -CCCHHHHHHHHHHcCCChHHEEEEcCchHhHHHHHHCCCeEEEEecCCccCCCCCcccccCCCCcEEECCHHHHHHHhc
Confidence             999999999999999999999999999999999999999999998    4431       3568999999999998764

>3vay_A HAD-superfamily hydrolase; rossmann fold, haloacid dehalogenase; 1.98A {Pseudomonas syringae PV}

Probab=99.77  E-value=1.3e-18  Score=142.61  Aligned_cols=120  Identities=23%  Similarity=0.349  Sum_probs=107.8

Q ss_pred             CCCCCChhHHHHHhcCC--CCeEEEeCCChHHHHHHHHHcCCccccceeEeeccCCCCCCCCCCCCCcccccCCcccccc
Q 027403           53 EKLKPDPVLRNLLLSMP--QRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRIL  130 (224)
Q Consensus        53 ~~~~~~~g~~~~L~~l~--~~~~I~Tn~~~~~~~~~l~~lgl~~~fd~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  130 (224)
                      ..+.++||+.++|+.|+  ++++|+||++..     ++.+|+.++|+.++++++++..                      
T Consensus       102 ~~~~~~~~~~~~l~~l~~~~~~~i~t~~~~~-----l~~~~l~~~f~~~~~~~~~~~~----------------------  154 (230)
T 3vay_A          102 HQVQIFPEVQPTLEILAKTFTLGVITNGNAD-----VRRLGLADYFAFALCAEDLGIG----------------------  154 (230)
T ss_dssp             TCCCBCTTHHHHHHHHHTTSEEEEEESSCCC-----GGGSTTGGGCSEEEEHHHHTCC----------------------
T ss_pred             ccCccCcCHHHHHHHHHhCCeEEEEECCchh-----hhhcCcHHHeeeeEEccccCCC----------------------
Confidence            34789999999999986  678899999876     6889999999999999988764                      


Q ss_pred             CCCCHHHHHHHHHHhCCCCCcEEEEeCCh-hcHHHHHHcCCeEEEECCCCC----CCCCceEeCCHhHHHHHHHH
Q 027403          131 CKPSLEAIETAIRIANVDPKKTIFFDDSA-RNIASAKAAGLHTVIVGSSVP----VPPADHALNSIHNIKEAIPE  200 (224)
Q Consensus       131 ~KP~~~~~~~al~~~~~~~~~~l~VgDs~-~Di~~A~~~G~~~v~v~~~~~----~~~~d~~i~~~~dl~~~i~~  200 (224)
                       ||+|.+|..+++++|++|++|++|||+. +|+.+|+++|+.++++.++..    ...++++++++.+|.++|.+
T Consensus       155 -kp~~~~~~~~~~~~~~~~~~~~~vGD~~~~Di~~a~~aG~~~~~v~~~~~~~~~~~~~~~~~~~l~el~~~l~~  228 (230)
T 3vay_A          155 -KPDPAPFLEALRRAKVDASAAVHVGDHPSDDIAGAQQAGMRAIWYNPQGKAWDADRLPDAEIHNLSQLPEVLAR  228 (230)
T ss_dssp             -TTSHHHHHHHHHHHTCCGGGEEEEESCTTTTHHHHHHTTCEEEEECTTCCCCCSSSCCSEEESSGGGHHHHHHT
T ss_pred             -CcCHHHHHHHHHHhCCCchheEEEeCChHHHHHHHHHCCCEEEEEcCCCCCCcccCCCCeeECCHHHHHHHHHh
Confidence             9999999999999999999999999998 999999999999999988764    45689999999999988753

>2fdr_A Conserved hypothetical protein; SAD, structural genomics, agrobacter tumefaciens, HAD-superfamily hydrolase; 2.00A {Agrobacterium tumefaciens str} SCOP: c.108.1.6

Probab=99.76  E-value=8.2e-18  Score=137.45  Aligned_cols=126  Identities=17%  Similarity=0.278  Sum_probs=114.0

Q ss_pred             CCCCChhHHHHHhcCCCCeEEEeCCChHHHHHHHHHcCCcccc-ceeEeeccCCCCCCCCCCCCCcccccCCccccccC-
Q 027403           54 KLKPDPVLRNLLLSMPQRKIIFTNADQKHAMEVLGRLGLEDCF-EGIICFETINPRLQPADNTDGIENNSFSSNQRILC-  131 (224)
Q Consensus        54 ~~~~~~g~~~~L~~l~~~~~I~Tn~~~~~~~~~l~~lgl~~~f-d~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-  131 (224)
                      ...++|++.++|+.++.+++|+||++...+...++++|+.++| +.++++++++.                       + 
T Consensus        85 ~~~~~~~~~~~l~~l~~~~~i~s~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~-----------------------~~  141 (229)
T 2fdr_A           85 DVKIIDGVKFALSRLTTPRCICSNSSSHRLDMMLTKVGLKPYFAPHIYSAKDLGA-----------------------DR  141 (229)
T ss_dssp             HCCBCTTHHHHHHHCCSCEEEEESSCHHHHHHHHHHTTCGGGTTTCEEEHHHHCT-----------------------TC
T ss_pred             CCccCcCHHHHHHHhCCCEEEEECCChhHHHHHHHhCChHHhccceEEecccccc-----------------------CC
Confidence            3678999999999999999999999999999999999999999 88888887654                       6 


Q ss_pred             -CCCHHHHHHHHHHhCCCCCcEEEEeCChhcHHHHHHcCCeEEEECCCCCC----------CCCceEeCCHhHHHHHHHH
Q 027403          132 -KPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVPV----------PPADHALNSIHNIKEAIPE  200 (224)
Q Consensus       132 -KP~~~~~~~al~~~~~~~~~~l~VgDs~~Di~~A~~~G~~~v~v~~~~~~----------~~~d~~i~~~~dl~~~i~~  200 (224)
                       ||++.+|..+++++|++|++|++|||+.+|+.+|+++|+.++++.++...          .+++++++++.++.++|..
T Consensus       142 ~kpk~~~~~~~~~~l~~~~~~~i~iGD~~~Di~~a~~aG~~~i~~~~~~~~~~~~~~~l~~~~ad~v~~~~~el~~~l~~  221 (229)
T 2fdr_A          142 VKPKPDIFLHGAAQFGVSPDRVVVVEDSVHGIHGARAAGMRVIGFTGASHTYPSHADRLTDAGAETVISRMQDLPAVIAA  221 (229)
T ss_dssp             CTTSSHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHHTTCEEEEECCSTTCCTTHHHHHHHHTCSEEESCGGGHHHHHHH
T ss_pred             CCcCHHHHHHHHHHcCCChhHeEEEcCCHHHHHHHHHCCCEEEEEecCCccchhhhHHHhhcCCceeecCHHHHHHHHHH
Confidence             99999999999999999999999999999999999999999999987642          1389999999999998877


Q ss_pred             HH
Q 027403          201 IW  202 (224)
Q Consensus       201 ~~  202 (224)
                      ++
T Consensus       222 ~~  223 (229)
T 2fdr_A          222 MA  223 (229)
T ss_dssp             HT
T ss_pred             hh
Confidence            64

>2hsz_A Novel predicted phosphatase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: UNL; 1.90A {Haemophilus somnus 129PT} SCOP: c.108.1.6

Probab=99.76  E-value=1.9e-18  Score=145.01  Aligned_cols=123  Identities=19%  Similarity=0.247  Sum_probs=110.0

Q ss_pred             CCCCCChhHHHHHhcCC---CCeEEEeCCChHHHHHHHHHcCCccccceeEeeccCCCCCCCCCCCCCcccccCCccccc
Q 027403           53 EKLKPDPVLRNLLLSMP---QRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRI  129 (224)
Q Consensus        53 ~~~~~~~g~~~~L~~l~---~~~~I~Tn~~~~~~~~~l~~lgl~~~fd~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  129 (224)
                      ....++||+.++|+.|+   ++++|+||++...+...++++|+.++|+.++++++....                     
T Consensus       111 ~~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~gl~~~f~~~~~~~~~~~~---------------------  169 (243)
T 2hsz_A          111 NISRLYPNVKETLEALKAQGYILAVVTNKPTKHVQPILTAFGIDHLFSEMLGGQSLPEI---------------------  169 (243)
T ss_dssp             SSCEECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGCSEEECTTTSSSC---------------------
T ss_pred             ccCccCCCHHHHHHHHHHCCCEEEEEECCcHHHHHHHHHHcCchheEEEEEecccCCCC---------------------
Confidence            44688999999999986   678899999999999999999999999999998887664                     


Q ss_pred             cCCCCHHHHHHHHHHhCCCCCcEEEEeCChhcHHHHHHcCCeEEEECCCCC------CCCCceEeCCHhHHHHHH
Q 027403          130 LCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP------VPPADHALNSIHNIKEAI  198 (224)
Q Consensus       130 ~~KP~~~~~~~al~~~~~~~~~~l~VgDs~~Di~~A~~~G~~~v~v~~~~~------~~~~d~~i~~~~dl~~~i  198 (224)
                        ||++.+|..+++++|++|++|++|||+.+|+.+|+++|+.++++.++..      ...++++++++.+|.+++
T Consensus       170 --Kp~~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~ad~vi~~~~el~~~l  242 (243)
T 2hsz_A          170 --KPHPAPFYYLCGKFGLYPKQILFVGDSQNDIFAAHSAGCAVVGLTYGYNYNIPIAQSKPDWIFDDFADILKIT  242 (243)
T ss_dssp             --TTSSHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHHHTCEEEEESSSCSTTCCGGGGCCSEEESSGGGGGGGT
T ss_pred             --CcCHHHHHHHHHHhCcChhhEEEEcCCHHHHHHHHHCCCeEEEEcCCCCchhhhhhCCCCEEECCHHHHHHHh
Confidence              9999999999999999999999999999999999999999999988742      345899999999987543

>2zg6_A Putative uncharacterized protein ST2620, probable 2-haloalkanoic; probable 2-haloalkanoic acid dehalogenase, hydrolase, structural genomics; 2.40A {Sulfolobus tokodaii}

Probab=99.76  E-value=7.6e-19  Score=144.97  Aligned_cols=122  Identities=13%  Similarity=0.161  Sum_probs=97.3

Q ss_pred             CCCCChhHHHHHhcCC---CCeEEEeCCChHHHHHHHHHcCCccccceeEeeccCCCCCCCCCCCCCcccccCCcccccc
Q 027403           54 KLKPDPVLRNLLLSMP---QRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRIL  130 (224)
Q Consensus        54 ~~~~~~g~~~~L~~l~---~~~~I~Tn~~~~~~~~~l~~lgl~~~fd~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  130 (224)
                      .+.++||+.++|+.|+   ++++|+||++. .+...++++|+.++|+.++++++++..                      
T Consensus        93 ~~~~~~~~~~~l~~l~~~g~~~~i~Tn~~~-~~~~~l~~~gl~~~f~~~~~~~~~~~~----------------------  149 (220)
T 2zg6_A           93 EAFLYDDTLEFLEGLKSNGYKLALVSNASP-RVKTLLEKFDLKKYFDALALSYEIKAV----------------------  149 (220)
T ss_dssp             EEEECTTHHHHHHHHHTTTCEEEECCSCHH-HHHHHHHHHTCGGGCSEEC------------------------------
T ss_pred             CceECcCHHHHHHHHHHCCCEEEEEeCCcH-HHHHHHHhcCcHhHeeEEEeccccCCC----------------------
Confidence            4679999999999986   57889999977 488899999999999999999988764                      


Q ss_pred             CCCCHHHHHHHHHHhCCCCCcEEEEeCChh-cHHHHHHcCCeEEEECCCCCCCCCceEeCCHhHHHHHHHHHH
Q 027403          131 CKPSLEAIETAIRIANVDPKKTIFFDDSAR-NIASAKAAGLHTVIVGSSVPVPPADHALNSIHNIKEAIPEIW  202 (224)
Q Consensus       131 ~KP~~~~~~~al~~~~~~~~~~l~VgDs~~-Di~~A~~~G~~~v~v~~~~~~~~~d~~i~~~~dl~~~i~~~~  202 (224)
                       ||+|.+|..+++++|++|   +||||+.+ |+.+|+++|++++++.++......+++++++.+|.++|.+++
T Consensus       150 -Kp~~~~~~~~~~~~~~~~---~~vgD~~~~Di~~a~~aG~~~i~v~~~~~~~~~~~~i~~l~el~~~l~~~~  218 (220)
T 2zg6_A          150 -KPNPKIFGFALAKVGYPA---VHVGDIYELDYIGAKRSYVDPILLDRYDFYPDVRDRVKNLREALQKIEEMN  218 (220)
T ss_dssp             ----CCHHHHHHHHHCSSE---EEEESSCCCCCCCSSSCSEEEEEBCTTSCCTTCCSCBSSHHHHHHHHHHHC
T ss_pred             -CCCHHHHHHHHHHcCCCe---EEEcCCchHhHHHHHHCCCeEEEECCCCCCCCcceEECCHHHHHHHHHHhc
Confidence             999999999999999988   99999998 999999999999999876332223678999999999887654

>1qyi_A ZR25, hypothetical protein; structural genomics, PSI, protein structure initiative, NORT structural genomics consortium, NESG; 2.50A {Staphylococcus aureus subsp} SCOP: c.108.1.13

Probab=99.76  E-value=7.6e-19  Score=159.92  Aligned_cols=138  Identities=20%  Similarity=0.209  Sum_probs=114.2

Q ss_pred             CCCCChhHHHHHhcCC---CCeEEEeCCChHHHHHHHHHcCCccccc--eeEeeccCCCCCCCCCCCCCcccccCCcccc
Q 027403           54 KLKPDPVLRNLLLSMP---QRKIIFTNADQKHAMEVLGRLGLEDCFE--GIICFETINPRLQPADNTDGIENNSFSSNQR  128 (224)
Q Consensus        54 ~~~~~~g~~~~L~~l~---~~~~I~Tn~~~~~~~~~l~~lgl~~~fd--~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~  128 (224)
                      .+.++||+.++|+.|+   ++++|+||++...+...++++|+.++|+  .+++++++...            +..++...
T Consensus       213 ~~~l~pGv~elL~~Lk~~Gi~laIvTn~~~~~~~~~L~~lgL~~~Fd~~~Ivs~ddv~~~------------~~~~~~~k  280 (384)
T 1qyi_A          213 ILRPVDEVKVLLNDLKGAGFELGIATGRPYTETVVPFENLGLLPYFEADFIATASDVLEA------------ENMYPQAR  280 (384)
T ss_dssp             BSSCHHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCGGGSCGGGEECHHHHHHH------------HHHSTTSC
T ss_pred             CCCcCcCHHHHHHHHHhCCCEEEEEeCCcHHHHHHHHHHcCChHhcCCCEEEeccccccc------------cccccccc
Confidence            4688999999999996   7899999999999999999999999999  78888875310            00001111


Q ss_pred             ccCCCCHHHHHHHHHHhC--------------CCCCcEEEEeCChhcHHHHHHcCCeEEEECCCCC---------CCCCc
Q 027403          129 ILCKPSLEAIETAIRIAN--------------VDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP---------VPPAD  185 (224)
Q Consensus       129 ~~~KP~~~~~~~al~~~~--------------~~~~~~l~VgDs~~Di~~A~~~G~~~v~v~~~~~---------~~~~d  185 (224)
                      +.+||+|.+|..++++++              ++|++|+||||+.+|+.+|+++|++++++.++..         ..+++
T Consensus       281 p~~KP~P~~~~~a~~~lg~~~~~~~~~~~~~~v~p~e~l~VGDs~~Di~aAk~AG~~~I~V~~g~~~~~~~~~l~~~~ad  360 (384)
T 1qyi_A          281 PLGKPNPFSYIAALYGNNRDKYESYINKQDNIVNKDDVFIVGDSLADLLSAQKIGATFIGTLTGLKGKDAAGELEAHHAD  360 (384)
T ss_dssp             CCCTTSTHHHHHHHHCCCGGGHHHHHHCCTTCSCTTTEEEEESSHHHHHHHHHHTCEEEEESCBTTBGGGHHHHHHTTCS
T ss_pred             CCCCCCHHHHHHHHHHcCCccccccccccccCCCCcCeEEEcCCHHHHHHHHHcCCEEEEECCCccccccHHHHhhcCCC
Confidence            124999999999999999              8999999999999999999999999999998752         23689


Q ss_pred             eEeCCHhHHHHHHHHHHh
Q 027403          186 HALNSIHNIKEAIPEIWE  203 (224)
Q Consensus       186 ~~i~~~~dl~~~i~~~~~  203 (224)
                      ++++++.++.+++.+.++
T Consensus       361 ~vi~sl~eL~~~l~~~~~  378 (384)
T 1qyi_A          361 YVINHLGELRGVLDNLLE  378 (384)
T ss_dssp             EEESSGGGHHHHHSCTTT
T ss_pred             EEECCHHHHHHHHHHHHh
Confidence            999999999987765544

>2hcf_A Hydrolase, haloacid dehalogenase-like family; NP_662590.1, ST genomics, PSI-2, protein structure initiative; 1.80A {Chlorobaculum tepidum} SCOP: c.108.1.6

Probab=99.75  E-value=5.6e-18  Score=138.88  Aligned_cols=129  Identities=16%  Similarity=0.163  Sum_probs=112.2

Q ss_pred             CCCCCChhHHHHHhcCC----CCeEEEeCCChHHHHHHHHHcCCccccceeEeeccCCCCCCCCCCCCCcccccCCcccc
Q 027403           53 EKLKPDPVLRNLLLSMP----QRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQR  128 (224)
Q Consensus        53 ~~~~~~~g~~~~L~~l~----~~~~I~Tn~~~~~~~~~l~~lgl~~~fd~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~  128 (224)
                      ....++||+.++|+.++    .+++|+||++...+...++.+|+.++|+.++++++....                    
T Consensus        90 ~~~~~~~~~~~~l~~l~~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~--------------------  149 (234)
T 2hcf_A           90 EDITLLEGVRELLDALSSRSDVLLGLLTGNFEASGRHKLKLPGIDHYFPFGAFADDALDR--------------------  149 (234)
T ss_dssp             GGEEECTTHHHHHHHHHTCTTEEEEEECSSCHHHHHHHHHTTTCSTTCSCEECTTTCSSG--------------------
T ss_pred             CCCCcCCCHHHHHHHHHhCCCceEEEEcCCcHHHHHHHHHHCCchhhcCcceecCCCcCc--------------------
Confidence            34678899999999885    346799999999999999999999999987777765432                    


Q ss_pred             ccCCCCHHHHHHHHHHhC--CCCCcEEEEeCChhcHHHHHHcCCeEEEECCCCC------CCCCceEeCCHhHHHHHHHH
Q 027403          129 ILCKPSLEAIETAIRIAN--VDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP------VPPADHALNSIHNIKEAIPE  200 (224)
Q Consensus       129 ~~~KP~~~~~~~al~~~~--~~~~~~l~VgDs~~Di~~A~~~G~~~v~v~~~~~------~~~~d~~i~~~~dl~~~i~~  200 (224)
                        +||.+.+|..+++++|  ++|++|++|||+.+|+.+|+++|+.++++.++..      ..++++++.++.+|.+++.+
T Consensus       150 --~k~~~~~~~~~~~~lg~~~~~~~~i~iGD~~~Di~~a~~aG~~~i~v~~~~~~~~~~~~~~a~~v~~~~~el~~~l~~  227 (234)
T 2hcf_A          150 --NELPHIALERARRMTGANYSPSQIVIIGDTEHDIRCARELDARSIAVATGNFTMEELARHKPGTLFKNFAETDEVLAS  227 (234)
T ss_dssp             --GGHHHHHHHHHHHHHCCCCCGGGEEEEESSHHHHHHHHTTTCEEEEECCSSSCHHHHHTTCCSEEESCSCCHHHHHHH
T ss_pred             --cchHHHHHHHHHHHhCCCCCcccEEEECCCHHHHHHHHHCCCcEEEEcCCCCCHHHHHhCCCCEEeCCHHhHHHHHHH
Confidence              3789999999999999  9999999999999999999999999999998754      23589999999999999887


Q ss_pred             HHh
Q 027403          201 IWE  203 (224)
Q Consensus       201 ~~~  203 (224)
                      +..
T Consensus       228 ~~~  230 (234)
T 2hcf_A          228 ILT  230 (234)
T ss_dssp             HHC
T ss_pred             Hhc
Confidence            764

>2gmw_A D,D-heptose 1,7-bisphosphate phosphatase; Zn-binding protein, hydrolase; 1.50A {Escherichia coli} SCOP: c.108.1.19 PDB: 3esq_A 3esr_A 3l1u_A 3l1v_A 3l8e_A 3l8f_A 3l8g_A*

Probab=99.74  E-value=8.1e-18  Score=139.58  Aligned_cols=134  Identities=18%  Similarity=0.192  Sum_probs=105.7

Q ss_pred             CCCCChhHHHHHhcCC---CCeEEEeCCC---------------hHHHHHHHHHcCCccccceeEeeccCCCCCCCCCCC
Q 027403           54 KLKPDPVLRNLLLSMP---QRKIIFTNAD---------------QKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNT  115 (224)
Q Consensus        54 ~~~~~~g~~~~L~~l~---~~~~I~Tn~~---------------~~~~~~~l~~lgl~~~fd~ii~~~~~~~~~~~~~~~  115 (224)
                      .+.++||+.++|+.|+   ++++|+||++               ...+...++.+|+.  |+.++.+.+....     ..
T Consensus        48 ~~~~~pg~~e~L~~L~~~G~~~~ivTn~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~--f~~~~~~~~~~~~-----~~  120 (211)
T 2gmw_A           48 NFEFIDGVIDAMRELKKMGFALVVVTNQSGIARGKFTEAQFETLTEWMDWSLADRDVD--LDGIYYCPHHPQG-----SV  120 (211)
T ss_dssp             GCCBCTTHHHHHHHHHHTTCEEEEEEECTHHHHTSSCHHHHHHHHHHHHHHHHHTTCC--CSEEEEECCBTTC-----SS
T ss_pred             cCcCCcCHHHHHHHHHHCCCeEEEEECcCCcCCCccCHHHHHHHHHHHHHHHHHcCCc--eEEEEECCcCCCC-----cc
Confidence            3689999999999996   7899999999               47888999999987  8876654321100     00


Q ss_pred             CCcccccCCccccccCCCCHHHHHHHHHHhCCCCCcEEEEeCChhcHHHHHHcCCeE-EEECCCCCC-----CCCceEeC
Q 027403          116 DGIENNSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHT-VIVGSSVPV-----PPADHALN  189 (224)
Q Consensus       116 ~~~~~~~~~~~~~~~~KP~~~~~~~al~~~~~~~~~~l~VgDs~~Di~~A~~~G~~~-v~v~~~~~~-----~~~d~~i~  189 (224)
                            ..++.....+||+|.+|..++++++++|++|+||||+.+|+.+|+++|+.+ +++.++...     ..++++++
T Consensus       121 ------~~~~~~~~~~KP~p~~~~~~~~~lgi~~~~~~~VGD~~~Di~~a~~aG~~~~i~v~~g~~~~~~~~~~~d~vi~  194 (211)
T 2gmw_A          121 ------EEFRQVCDCRKPHPGMLLSARDYLHIDMAASYMVGDKLEDMQAAVAANVGTKVLVRTGKPITPEAENAADWVLN  194 (211)
T ss_dssp             ------GGGBSCCSSSTTSCHHHHHHHHHHTBCGGGCEEEESSHHHHHHHHHTTCSEEEEESSSSCCCHHHHHHCSEEES
T ss_pred             ------cccCccCcCCCCCHHHHHHHHHHcCCCHHHEEEEcCCHHHHHHHHHCCCceEEEEecCCCccccccCCCCEEeC
Confidence                  000011123599999999999999999999999999999999999999999 999988642     24899999


Q ss_pred             CHhHHHHHHHH
Q 027403          190 SIHNIKEAIPE  200 (224)
Q Consensus       190 ~~~dl~~~i~~  200 (224)
                      ++.||.+++..
T Consensus       195 ~l~el~~~l~~  205 (211)
T 2gmw_A          195 SLADLPQAIKK  205 (211)
T ss_dssp             CGGGHHHHHHC
T ss_pred             CHHHHHHHHHh
Confidence            99999887653

>3ddh_A Putative haloacid dehalogenase-like family hydrol; hydrolase, HAD superfamily, ST genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides thetaiotaomicron}

Probab=99.74  E-value=2.3e-17  Score=134.14  Aligned_cols=118  Identities=14%  Similarity=0.198  Sum_probs=103.9

Q ss_pred             CCCCCChhHHHHHhcCC----CCeEEEeCCChHHHHHHHHHcCCccccceeEeeccCCCCCCCCCCCCCcccccCCcccc
Q 027403           53 EKLKPDPVLRNLLLSMP----QRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQR  128 (224)
Q Consensus        53 ~~~~~~~g~~~~L~~l~----~~~~I~Tn~~~~~~~~~l~~lgl~~~fd~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~  128 (224)
                      ....++|++.++|+.++    ++++++||++...+...++.+|+.++|+.++++.                         
T Consensus       102 ~~~~~~~~~~~~l~~l~~~g~~~~~i~t~~~~~~~~~~l~~~~~~~~f~~~~~~~-------------------------  156 (234)
T 3ddh_A          102 MPIELLPGVKETLKTLKETGKYKLVVATKGDLLDQENKLERSGLSPYFDHIEVMS-------------------------  156 (234)
T ss_dssp             CCCCBCTTHHHHHHHHHHHCCCEEEEEEESCHHHHHHHHHHHTCGGGCSEEEEES-------------------------
T ss_pred             ccCCcCccHHHHHHHHHhCCCeEEEEEeCCchHHHHHHHHHhCcHhhhheeeecC-------------------------
Confidence            45789999999999883    6788999999999999999999999999988642                         


Q ss_pred             ccCCCCHHHHHHHHHHhCCCCCcEEEEeCCh-hcHHHHHHcCCeEEEECCCC----C-----CCCCceEeCCHhHHHHHH
Q 027403          129 ILCKPSLEAIETAIRIANVDPKKTIFFDDSA-RNIASAKAAGLHTVIVGSSV----P-----VPPADHALNSIHNIKEAI  198 (224)
Q Consensus       129 ~~~KP~~~~~~~al~~~~~~~~~~l~VgDs~-~Di~~A~~~G~~~v~v~~~~----~-----~~~~d~~i~~~~dl~~~i  198 (224)
                         ||++.+|..+++++|++|++|++|||+. +|+.+|+++|+.++++.++.    .     ..+++++++|+.||.++|
T Consensus       157 ---kpk~~~~~~~~~~lgi~~~~~i~iGD~~~~Di~~a~~aG~~~v~v~~~~~~g~~~~~~~~~~~d~v~~~l~el~~~l  233 (234)
T 3ddh_A          157 ---DKTEKEYLRLLSILQIAPSELLMVGNSFKSDIQPVLSLGGYGVHIPFEVMWKHEVTETFAHERLKQVKRLDDLLSLL  233 (234)
T ss_dssp             ---CCSHHHHHHHHHHHTCCGGGEEEEESCCCCCCHHHHHHTCEEEECCCCTTCCCC---CCCCTTEEECSSGGGHHHHC
T ss_pred             ---CCCHHHHHHHHHHhCCCcceEEEECCCcHHHhHHHHHCCCeEEEecCCcccccCCcccccCCCceecccHHHHHHhc
Confidence               9999999999999999999999999997 99999999999999995442    2     233599999999998764

>2pke_A Haloacid delahogenase-like family hydrolase; NP_639141.1, ST genomics, joint center for structural genomics, JCSG; 1.81A {Xanthomonas campestris PV}

Probab=99.73  E-value=2e-17  Score=138.38  Aligned_cols=124  Identities=11%  Similarity=0.146  Sum_probs=108.5

Q ss_pred             CCCCCChhHHHHHhcCC--CCeEEEeCCChHHHHHHHHHcCCccccceeEeeccCCCCCCCCCCCCCcccccCCcccccc
Q 027403           53 EKLKPDPVLRNLLLSMP--QRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRIL  130 (224)
Q Consensus        53 ~~~~~~~g~~~~L~~l~--~~~~I~Tn~~~~~~~~~l~~lgl~~~fd~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  130 (224)
                      ....++||+.++|+.|+  ++++|+||++...+...++.+|+.++|+.++++.                           
T Consensus       109 ~~~~~~~~~~~~l~~l~~~~~~~i~t~~~~~~~~~~l~~~~l~~~f~~i~~~~---------------------------  161 (251)
T 2pke_A          109 HPVEVIAGVREAVAAIAADYAVVLITKGDLFHQEQKIEQSGLSDLFPRIEVVS---------------------------  161 (251)
T ss_dssp             CCCCBCTTHHHHHHHHHTTSEEEEEEESCHHHHHHHHHHHSGGGTCCCEEEES---------------------------
T ss_pred             ccCCcCccHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCcHHhCceeeeeC---------------------------
Confidence            45788999999999985  6788999999999999999999999999888742                           


Q ss_pred             CCCCHHHHHHHHHHhCCCCCcEEEEeCCh-hcHHHHHHcCCeEEEECCCCC----------CCCCce-EeCCHhHHHHHH
Q 027403          131 CKPSLEAIETAIRIANVDPKKTIFFDDSA-RNIASAKAAGLHTVIVGSSVP----------VPPADH-ALNSIHNIKEAI  198 (224)
Q Consensus       131 ~KP~~~~~~~al~~~~~~~~~~l~VgDs~-~Di~~A~~~G~~~v~v~~~~~----------~~~~d~-~i~~~~dl~~~i  198 (224)
                       ||++.+|..+++++|++|++|++|||+. +|+.+|+++|+.++++.++..          ...+++ +++++.+|.+++
T Consensus       162 -kp~~~~~~~~~~~l~~~~~~~i~iGD~~~~Di~~a~~aG~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~~~~el~~~l  240 (251)
T 2pke_A          162 -EKDPQTYARVLSEFDLPAERFVMIGNSLRSDVEPVLAIGGWGIYTPYAVTWAHEQDHGVAADEPRLREVPDPSGWPAAV  240 (251)
T ss_dssp             -CCSHHHHHHHHHHHTCCGGGEEEEESCCCCCCHHHHHTTCEEEECCCC-------------CCTTEEECSSGGGHHHHH
T ss_pred             -CCCHHHHHHHHHHhCcCchhEEEECCCchhhHHHHHHCCCEEEEECCCCccccccccccccCCCCeeeeCCHHHHHHHH
Confidence             9999999999999999999999999999 999999999999999987642          245888 999999999988


Q ss_pred             HHHHhh
Q 027403          199 PEIWEG  204 (224)
Q Consensus       199 ~~~~~~  204 (224)
                      .++..+
T Consensus       241 ~~~~~~  246 (251)
T 2pke_A          241 RALDAQ  246 (251)
T ss_dssp             HHHHHH
T ss_pred             HHhChh
Confidence            776543

>2o2x_A Hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; 1.50A {Mesorhizobium loti} SCOP: c.108.1.19

Probab=99.73  E-value=4.3e-18  Score=141.39  Aligned_cols=137  Identities=14%  Similarity=0.190  Sum_probs=105.8

Q ss_pred             CCCCChhHHHHHhcCC---CCeEEEeCCCh---------------HHHHHHHHHcCCccccceeEeeccCCCCCCCCCCC
Q 027403           54 KLKPDPVLRNLLLSMP---QRKIIFTNADQ---------------KHAMEVLGRLGLEDCFEGIICFETINPRLQPADNT  115 (224)
Q Consensus        54 ~~~~~~g~~~~L~~l~---~~~~I~Tn~~~---------------~~~~~~l~~lgl~~~fd~ii~~~~~~~~~~~~~~~  115 (224)
                      ...++||+.++|+.|+   ++++|+||++.               ..+...++++|+.  |+.++.+......       
T Consensus        54 ~~~~~~g~~e~L~~L~~~G~~~~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~--~~~~~~~~~~~~g-------  124 (218)
T 2o2x_A           54 EIVLRPQMLPAIATANRAGIPVVVVTNQSGIARGYFGWSAFAAVNGRVLELLREEGVF--VDMVLACAYHEAG-------  124 (218)
T ss_dssp             GCCBCGGGHHHHHHHHHHTCCEEEEEECHHHHTTSCCHHHHHHHHHHHHHHHHHTTCC--CSEEEEECCCTTC-------
T ss_pred             cCeECcCHHHHHHHHHHCCCEEEEEcCcCCCCcccccHHHHHHHHHHHHHHHHHcCCc--eeeEEEeecCCCC-------
Confidence            3688999999999996   78999999998               7888999999985  6664433110000       


Q ss_pred             CCcccccCCccccccCCCCHHHHHHHHHHhCCCCCcEEEEeCChhcHHHHHHcCCeE-EEECCCCC-----CCCCceEeC
Q 027403          116 DGIENNSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHT-VIVGSSVP-----VPPADHALN  189 (224)
Q Consensus       116 ~~~~~~~~~~~~~~~~KP~~~~~~~al~~~~~~~~~~l~VgDs~~Di~~A~~~G~~~-v~v~~~~~-----~~~~d~~i~  189 (224)
                      ...    ........+||+|.+|..++++++++|++|+||||+.+|+.+|+++|+.+ +++.++..     ...++++++
T Consensus       125 ~~~----~~~~~~~~~KP~~~~~~~~~~~~~i~~~~~~~VGD~~~Di~~a~~aG~~~~i~v~~g~~~~~~~~~~~~~~i~  200 (218)
T 2o2x_A          125 VGP----LAIPDHPMRKPNPGMLVEAGKRLALDLQRSLIVGDKLADMQAGKRAGLAQGWLVDGEAAVQPGFAIRPLRDSS  200 (218)
T ss_dssp             CST----TCCSSCTTSTTSCHHHHHHHHHHTCCGGGCEEEESSHHHHHHHHHTTCSEEEEETCCCEEETTEEEEEESSHH
T ss_pred             cee----ecccCCccCCCCHHHHHHHHHHcCCCHHHEEEEeCCHHHHHHHHHCCCCEeEEEecCCCCcccccCCCCEecc
Confidence            000    00001122599999999999999999999999999999999999999999 99998863     134788999


Q ss_pred             CHhHHHHHHHHHHh
Q 027403          190 SIHNIKEAIPEIWE  203 (224)
Q Consensus       190 ~~~dl~~~i~~~~~  203 (224)
                      ++.+|.+++..+..
T Consensus       201 ~l~el~~~l~~~~~  214 (218)
T 2o2x_A          201 ELGDLLAAIETLGR  214 (218)
T ss_dssp             HHHHHHHHHHHTCC
T ss_pred             cHHHHHHHHHHHhc
Confidence            99999988876543

>2go7_A Hydrolase, haloacid dehalogenase-like family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.10A {Streptococcus pneumoniae} SCOP: c.108.1.6

Probab=99.73  E-value=1.2e-17  Score=133.15  Aligned_cols=120  Identities=20%  Similarity=0.315  Sum_probs=109.2

Q ss_pred             CCCCCChhHHHHHhcCC---CCeEEEeCCChHHHHHHHHHcCCccccceeEeeccCCCCCCCCCCCCCcccccCCccccc
Q 027403           53 EKLKPDPVLRNLLLSMP---QRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRI  129 (224)
Q Consensus        53 ~~~~~~~g~~~~L~~l~---~~~~I~Tn~~~~~~~~~l~~lgl~~~fd~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  129 (224)
                      ....++|++.++|+.++   .+++++||++..... .++.+|+.++|+.++++++....                     
T Consensus        82 ~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~-~~~~~~~~~~f~~~~~~~~~~~~---------------------  139 (207)
T 2go7_A           82 AQVVLMPGAREVLAWADESGIQQFIYTHKGNNAFT-ILKDLGVESYFTEILTSQSGFVR---------------------  139 (207)
T ss_dssp             GGCEECTTHHHHHHHHHHTTCEEEEECSSCTHHHH-HHHHHTCGGGEEEEECGGGCCCC---------------------
T ss_pred             ccceeCcCHHHHHHHHHHCCCeEEEEeCCchHHHH-HHHHcCchhheeeEEecCcCCCC---------------------
Confidence            45678999999999886   678899999998888 99999999999999998887664                     


Q ss_pred             cCCCCHHHHHHHHHHhCCCCCcEEEEeCChhcHHHHHHcCCeEEEECCCCCCCCCceEeCCHhHHHHHH
Q 027403          130 LCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVPVPPADHALNSIHNIKEAI  198 (224)
Q Consensus       130 ~~KP~~~~~~~al~~~~~~~~~~l~VgDs~~Di~~A~~~G~~~v~v~~~~~~~~~d~~i~~~~dl~~~i  198 (224)
                        ||++.+|..+++++|++|++|++|||+.+|+.+|+++|+.++++.++. . .++++++++.||.+++
T Consensus       140 --Kp~~~~~~~~~~~~~i~~~~~~~iGD~~nDi~~~~~aG~~~i~~~~~~-~-~a~~v~~~~~el~~~l  204 (207)
T 2go7_A          140 --KPSPEAATYLLDKYQLNSDNTYYIGDRTLDVEFAQNSGIQSINFLEST-Y-EGNHRIQALADISRIF  204 (207)
T ss_dssp             --TTSSHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHHHTCEEEESSCCS-C-TTEEECSSTTHHHHHT
T ss_pred             --CCCcHHHHHHHHHhCCCcccEEEECCCHHHHHHHHHCCCeEEEEecCC-C-CCCEEeCCHHHHHHHH
Confidence              999999999999999999999999999999999999999999999887 4 8999999999988765

>2g80_A Protein UTR4; YEL038W, UTR4 protein (unknown transcript 4 protein), struct genomics, PSI, protein structure initiative; 2.28A {Saccharomyces cerevisiae} SCOP: c.108.1.22

Probab=99.72  E-value=3e-17  Score=140.97  Aligned_cols=116  Identities=12%  Similarity=0.208  Sum_probs=98.2

Q ss_pred             CCCCChhHHHHHhcCCCCeEEEeCCChHHHHHHHHHc-----------CCccccceeEeeccCCCCCCCCCCCCCccccc
Q 027403           54 KLKPDPVLRNLLLSMPQRKIIFTNADQKHAMEVLGRL-----------GLEDCFEGIICFETINPRLQPADNTDGIENNS  122 (224)
Q Consensus        54 ~~~~~~g~~~~L~~l~~~~~I~Tn~~~~~~~~~l~~l-----------gl~~~fd~ii~~~~~~~~~~~~~~~~~~~~~~  122 (224)
                      ...++||+.++|+. +++++|+||+++..+...++++           ++.++|+.++.+ .+..               
T Consensus       123 ~~~~~pgv~e~L~~-g~~l~i~Tn~~~~~~~~~l~~~~~g~~~~~~~l~l~~~~~~~f~~-~~~g---------------  185 (253)
T 2g80_A          123 KAPVYADAIDFIKR-KKRVFIYSSGSVKAQKLLFGYVQDPNAPAHDSLDLNSYIDGYFDI-NTSG---------------  185 (253)
T ss_dssp             CBCCCHHHHHHHHH-CSCEEEECSSCHHHHHHHHHSBCCTTCTTSCCBCCGGGCCEEECH-HHHC---------------
T ss_pred             cCCCCCCHHHHHHc-CCEEEEEeCCCHHHHHHHHHhhcccccccccccchHhhcceEEee-eccC---------------
Confidence            46799999999999 9999999999999999999976           477778877655 2211               


Q ss_pred             CCccccccCCCCHHHHHHHHHHhCCCCCcEEEEeCChhcHHHHHHcCCeEEEECCCCCC----CCCceEeCCHhHH
Q 027403          123 FSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVPV----PPADHALNSIHNI  194 (224)
Q Consensus       123 ~~~~~~~~~KP~~~~~~~al~~~~~~~~~~l~VgDs~~Di~~A~~~G~~~v~v~~~~~~----~~~d~~i~~~~dl  194 (224)
                              +||+|++|..+++++|++|++|+||||+.+|+.+|+++|++++++.++...    ..++++++|+.+|
T Consensus       186 --------~KP~p~~~~~a~~~lg~~p~~~l~vgDs~~di~aA~~aG~~~i~v~~~~~~~~~~~~~~~~i~~l~eL  253 (253)
T 2g80_A          186 --------KKTETQSYANILRDIGAKASEVLFLSDNPLELDAAAGVGIATGLASRPGNAPVPDGQKYQVYKNFETL  253 (253)
T ss_dssp             --------CTTCHHHHHHHHHHHTCCGGGEEEEESCHHHHHHHHTTTCEEEEECCTTSCCCCSSCCSCEESCSTTC
T ss_pred             --------CCCCHHHHHHHHHHcCCCcccEEEEcCCHHHHHHHHHcCCEEEEEcCCCCCCcccccCCCccCChhhC
Confidence                    299999999999999999999999999999999999999999999874321    1267889888764

>3d6j_A Putative haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides fragilis nctc 9343}

Probab=99.71  E-value=3e-17  Score=132.94  Aligned_cols=126  Identities=21%  Similarity=0.198  Sum_probs=107.3

Q ss_pred             CCCCChhHHHHHhcCC---CCeEEEeCCChHHHHHHHHHcCCccccceeEeeccCCCCCCCCCCCCCcccccCCcccccc
Q 027403           54 KLKPDPVLRNLLLSMP---QRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRIL  130 (224)
Q Consensus        54 ~~~~~~g~~~~L~~l~---~~~~I~Tn~~~~~~~~~l~~lgl~~~fd~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  130 (224)
                      ...++|++.++|+.++   .+++++||++...+...++++|+..+|+.++++++....                      
T Consensus        87 ~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------------  144 (225)
T 3d6j_A           87 NTILFPDTLPTLTHLKKQGIRIGIISTKYRFRILSFLRNHMPDDWFDIIIGGEDVTHH----------------------  144 (225)
T ss_dssp             GCEECTTHHHHHHHHHHHTCEEEEECSSCHHHHHHHHHTSSCTTCCSEEECGGGCSSC----------------------
T ss_pred             cCccCcCHHHHHHHHHHCCCeEEEEECCCHHHHHHHHHHcCchhheeeeeehhhcCCC----------------------
Confidence            4567899999998886   678899999999999999999999999999998887664                      


Q ss_pred             CCCCHHHHHHHHHHhCCCCCcEEEEeCChhcHHHHHHcCCeEEEECCCCC------CCCCceEeCCHhHHHHHHHHHH
Q 027403          131 CKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP------VPPADHALNSIHNIKEAIPEIW  202 (224)
Q Consensus       131 ~KP~~~~~~~al~~~~~~~~~~l~VgDs~~Di~~A~~~G~~~v~v~~~~~------~~~~d~~i~~~~dl~~~i~~~~  202 (224)
                       ||++.+|..+++++|++|+++++|||+.+|+.+|+.+|+.++++.++..      ..+++++++++.+|.++|.++.
T Consensus       145 -k~~~~~~~~~~~~~~~~~~~~i~iGD~~nDi~~~~~aG~~~~~~~~~~~~~~~l~~~~ad~v~~~~~el~~~l~~~~  221 (225)
T 3d6j_A          145 -KPDPEGLLLAIDRLKACPEEVLYIGDSTVDAGTAAAAGVSFTGVTSGMTTAQEFQAYPYDRIISTLGQLISVPEDKS  221 (225)
T ss_dssp             -TTSTHHHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEETTSSCCTTGGGGSCCSEEESSGGGGC-------
T ss_pred             -CCChHHHHHHHHHhCCChHHeEEEcCCHHHHHHHHHCCCeEEEECCCCCChHHHhhcCCCEEECCHHHHHHhhhhhc
Confidence             9999999999999999999999999999999999999999999988753      2248999999999998887654

>2pr7_A Haloacid dehalogenase/epoxide hydrolase family; NP_599989.1, uncharacterized protein, structural genomics; 1.44A {Corynebacterium glutamicum atcc 13032}

Probab=99.71  E-value=3.9e-18  Score=129.64  Aligned_cols=102  Identities=20%  Similarity=0.229  Sum_probs=93.2

Q ss_pred             CCCCChhHHHHHhcCC---CCeEEEeCCChHHHHHHHHHcCCccccceeEeeccCCCCCCCCCCCCCcccccCCcccccc
Q 027403           54 KLKPDPVLRNLLLSMP---QRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRIL  130 (224)
Q Consensus        54 ~~~~~~g~~~~L~~l~---~~~~I~Tn~~~~~~~~~l~~lgl~~~fd~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  130 (224)
                      ...++||+.++|+.|+   ++++|+||++...+...++++|+.++|+.++++++....                      
T Consensus        16 ~~~~~~~~~~~l~~L~~~G~~~~i~S~~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~----------------------   73 (137)
T 2pr7_A           16 TDEDQRRWRNLLAAAKKNGVGTVILSNDPGGLGAAPIRELETNGVVDKVLLSGELGVE----------------------   73 (137)
T ss_dssp             CHHHHHHHHHHHHHHHHTTCEEEEEECSCCGGGGHHHHHHHHTTSSSEEEEHHHHSCC----------------------
T ss_pred             CCccCccHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHCChHhhccEEEEeccCCCC----------------------
Confidence            3467899999999886   678999999999889999999999999999999887764                      


Q ss_pred             CCCCHHHHHHHHHHhCCCCCcEEEEeCChhcHHHHHHcCCeEEEECCC
Q 027403          131 CKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSS  178 (224)
Q Consensus       131 ~KP~~~~~~~al~~~~~~~~~~l~VgDs~~Di~~A~~~G~~~v~v~~~  178 (224)
                       ||+|.+|..++++++++|++++||||+.+|+.+|+++|+.++++.++
T Consensus        74 -Kp~~~~~~~~~~~~~~~~~~~~~vgD~~~di~~a~~~G~~~i~~~~~  120 (137)
T 2pr7_A           74 -KPEEAAFQAAADAIDLPMRDCVLVDDSILNVRGAVEAGLVGVYYQQF  120 (137)
T ss_dssp             -TTSHHHHHHHHHHTTCCGGGEEEEESCHHHHHHHHHHTCEEEECSCH
T ss_pred             -CCCHHHHHHHHHHcCCCcccEEEEcCCHHHHHHHHHCCCEEEEeCCh
Confidence             99999999999999999999999999999999999999999998764

>4dcc_A Putative haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 1.65A {Bacteroides thetaiotaomicron} PDB: 4dfd_A 4f71_A 4f72_A

Probab=99.71  E-value=4.8e-17  Score=134.47  Aligned_cols=119  Identities=24%  Similarity=0.276  Sum_probs=101.7

Q ss_pred             cCCCCHHHHHHHHhccCCCCCCCCChhHHHHHhcCC--CCeEEEeCCChHHHHHHH------HHcCCccccceeEeeccC
Q 027403           34 GYEFDNDEFHAFVHGKLPYEKLKPDPVLRNLLLSMP--QRKIIFTNADQKHAMEVL------GRLGLEDCFEGIICFETI  105 (224)
Q Consensus        34 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~L~~l~--~~~~I~Tn~~~~~~~~~l------~~lgl~~~fd~ii~~~~~  105 (224)
                      +...+.+++...+....    ..++||+.++|+.|+  ++++|+||++...+...+      +.+|+.++|+.+++++++
T Consensus        94 ~~~~~~~~~~~~~~~~~----~~~~~~~~~~l~~l~~~~~~~i~Sn~~~~~~~~~~~~l~~~~~~~l~~~fd~i~~~~~~  169 (229)
T 4dcc_A           94 GKMVSDKQIDAAWNSFL----VDIPTYKLDLLLKLREKYVVYLLSNTNDIHWKWVCKNAFPYRTFKVEDYFEKTYLSYEM  169 (229)
T ss_dssp             TSCCCHHHHHHHHHTTB----CCCCHHHHHHHHHHTTTSEEEEEECCCHHHHHHHHHHTSCBTTBCHHHHCSEEEEHHHH
T ss_pred             CCCCCHHHHHHHHHHHH----HhccHHHHHHHHHHHhcCcEEEEECCChHHHHHHHhhhhhhccCCHHHhCCEEEeeccc
Confidence            45566666666555422    246799999999997  678899999998887555      778999999999999988


Q ss_pred             CCCCCCCCCCCCcccccCCccccccCCCCHHHHHHHHHHhCCCCCcEEEEeCChhcHHHHHHcCCeEEEECCCC
Q 027403          106 NPRLQPADNTDGIENNSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSV  179 (224)
Q Consensus       106 ~~~~~~~~~~~~~~~~~~~~~~~~~~KP~~~~~~~al~~~~~~~~~~l~VgDs~~Di~~A~~~G~~~v~v~~~~  179 (224)
                      +..                       ||+|.+|..+++++|++|++|++|||+.+|+.+|+++|+.++++.++.
T Consensus       170 ~~~-----------------------KP~~~~~~~~~~~~g~~~~~~~~vGD~~~Di~~a~~aG~~~i~v~~~~  220 (229)
T 4dcc_A          170 KMA-----------------------KPEPEIFKAVTEDAGIDPKETFFIDDSEINCKVAQELGISTYTPKAGE  220 (229)
T ss_dssp             TCC-----------------------TTCHHHHHHHHHHHTCCGGGEEEECSCHHHHHHHHHTTCEEECCCTTC
T ss_pred             CCC-----------------------CCCHHHHHHHHHHcCCCHHHeEEECCCHHHHHHHHHcCCEEEEECCHH
Confidence            774                       999999999999999999999999999999999999999999998875

>1swv_A Phosphonoacetaldehyde hydrolase; HAD enzyme superfamily, phosphonotase, metal binding; 2.30A {Bacillus cereus} SCOP: c.108.1.3 PDB: 1sww_A 2iof_A* 2ioh_A 1rql_A 1rqn_A 2iof_K* 1rdf_A 1fez_A

Probab=99.71  E-value=4.5e-17  Score=136.97  Aligned_cols=125  Identities=14%  Similarity=0.120  Sum_probs=110.7

Q ss_pred             CCCCChhHHHHHhcCC---CCeEEEeCCChHHHHHHHHHcCCcccc-ceeEeeccCCCCCCCCCCCCCcccccCCccccc
Q 027403           54 KLKPDPVLRNLLLSMP---QRKIIFTNADQKHAMEVLGRLGLEDCF-EGIICFETINPRLQPADNTDGIENNSFSSNQRI  129 (224)
Q Consensus        54 ~~~~~~g~~~~L~~l~---~~~~I~Tn~~~~~~~~~l~~lgl~~~f-d~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  129 (224)
                      ...++|++.++|+.++   ++++++||++...+...++.+|+.++| +.+++++++...                     
T Consensus       101 ~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~---------------------  159 (267)
T 1swv_A          101 YASPINGVKEVIASLRERGIKIGSTTGYTREMMDIVAKEAALQGYKPDFLVTPDDVPAG---------------------  159 (267)
T ss_dssp             GCCBCTTHHHHHHHHHHTTCEEEEBCSSCHHHHHHHHHHHHHTTCCCSCCBCGGGSSCC---------------------
T ss_pred             ccccCccHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHcCCcccChHheecCCccCCC---------------------
Confidence            4678899999999885   678899999999999999999988886 888888887664                     


Q ss_pred             cCCCCHHHHHHHHHHhCCCC-CcEEEEeCChhcHHHHHHcCCeEEEECCCCCC---------------------------
Q 027403          130 LCKPSLEAIETAIRIANVDP-KKTIFFDDSARNIASAKAAGLHTVIVGSSVPV---------------------------  181 (224)
Q Consensus       130 ~~KP~~~~~~~al~~~~~~~-~~~l~VgDs~~Di~~A~~~G~~~v~v~~~~~~---------------------------  181 (224)
                        ||++.+|..+++++|++| ++|++|||+.+|+.+|+++|+.++++.++...                           
T Consensus       160 --kp~~~~~~~~~~~lgi~~~~~~i~iGD~~nDi~~a~~aG~~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (267)
T 1swv_A          160 --RPYPWMCYKNAMELGVYPMNHMIKVGDTVSDMKEGRNAGMWTVGVILGSSELGLTEEEVENMDSVELREKIEVVRNRF  237 (267)
T ss_dssp             --TTSSHHHHHHHHHHTCCSGGGEEEEESSHHHHHHHHHTTSEEEEECTTCTTTCCCHHHHHHSCHHHHHHHHHHHHHHH
T ss_pred             --CCCHHHHHHHHHHhCCCCCcCEEEEeCCHHHHHHHHHCCCEEEEEcCCCCccCccHHHHhhchhhhhhhhhhhHHHHH
Confidence              999999999999999999 99999999999999999999999999988641                           


Q ss_pred             --CCCceEeCCHhHHHHHHHHH
Q 027403          182 --PPADHALNSIHNIKEAIPEI  201 (224)
Q Consensus       182 --~~~d~~i~~~~dl~~~i~~~  201 (224)
                        ..+|++++++.+|.+++..+
T Consensus       238 ~~~~ad~v~~~~~el~~~l~~~  259 (267)
T 1swv_A          238 VENGAHFTIETMQELESVMEHI  259 (267)
T ss_dssp             HHTTCSEEESSGGGHHHHHHHH
T ss_pred             HhcCCceeccCHHHHHHHHHHH
Confidence              35899999999999887654

>1te2_A Putative phosphatase; structural genomics, phosphates, PSI, protein S initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.76A {Escherichia coli} SCOP: c.108.1.6

Probab=99.70  E-value=8.9e-17  Score=130.21  Aligned_cols=120  Identities=18%  Similarity=0.221  Sum_probs=107.7

Q ss_pred             CCCCChhHHHHHhcCC---CCeEEEeCCChHHHHHHHHHcCCccccceeEeeccCCCCCCCCCCCCCcccccCCcccccc
Q 027403           54 KLKPDPVLRNLLLSMP---QRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRIL  130 (224)
Q Consensus        54 ~~~~~~g~~~~L~~l~---~~~~I~Tn~~~~~~~~~l~~lgl~~~fd~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  130 (224)
                      ...++|++.++|+.++   .+++++||++...+...++.+|+..+|+.++++++.+..                      
T Consensus        92 ~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~----------------------  149 (226)
T 1te2_A           92 TRPLLPGVREAVALCKEQGLLVGLASASPLHMLEKVLTMFDLRDSFDALASAEKLPYS----------------------  149 (226)
T ss_dssp             HCCBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGCSEEEECTTSSCC----------------------
T ss_pred             cCCcCccHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHhcCcHhhCcEEEeccccCCC----------------------
Confidence            3578899999998885   678899999999999999999999999999999887764                      


Q ss_pred             CCCCHHHHHHHHHHhCCCCCcEEEEeCChhcHHHHHHcCCeEEEECCCCC-----CCCCceEeCCHhHHHH
Q 027403          131 CKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP-----VPPADHALNSIHNIKE  196 (224)
Q Consensus       131 ~KP~~~~~~~al~~~~~~~~~~l~VgDs~~Di~~A~~~G~~~v~v~~~~~-----~~~~d~~i~~~~dl~~  196 (224)
                       ||++..+..+++++|+++++|++|||+.+|+.+|+++|+.++++.++..     ...+++++.++.||.+
T Consensus       150 -kp~~~~~~~~~~~~~i~~~~~i~iGD~~nDi~~a~~aG~~~~~~~~~~~~~~~~~~~a~~v~~~~~el~~  219 (226)
T 1te2_A          150 -KPHPQVYLDCAAKLGVDPLTCVALEDSVNGMIASKAARMRSIVVPAPEAQNDPRFVLANVKLSSLTELTA  219 (226)
T ss_dssp             -TTSTHHHHHHHHHHTSCGGGEEEEESSHHHHHHHHHTTCEEEECCCTTTTTCGGGGGSSEECSCGGGCCH
T ss_pred             -CCChHHHHHHHHHcCCCHHHeEEEeCCHHHHHHHHHcCCEEEEEcCCCCcccccccccCeEECCHHHHhH
Confidence             9999999999999999999999999999999999999999999988753     3458999999999875

>3cnh_A Hydrolase family protein; NP_295428.1, predicted hydrolase of haloacid dehalogenase-LI superfamily; HET: MSE PG4; 1.66A {Deinococcus radiodurans R1}

Probab=99.68  E-value=1.1e-16  Score=128.92  Aligned_cols=101  Identities=20%  Similarity=0.338  Sum_probs=93.7

Q ss_pred             CCCChhHHHHHhcCC--CCeEEEeCCChHHHHHHHHHcCCccccceeEeeccCCCCCCCCCCCCCcccccCCccccccCC
Q 027403           55 LKPDPVLRNLLLSMP--QRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCK  132 (224)
Q Consensus        55 ~~~~~g~~~~L~~l~--~~~~I~Tn~~~~~~~~~l~~lgl~~~fd~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~K  132 (224)
                      ..++|++.++|+.|+  .+++|+||++...+...++++|+.++|+.+++++++...                       |
T Consensus        85 ~~~~~~~~~~l~~l~~~g~~~i~s~~~~~~~~~~l~~~~~~~~f~~~~~~~~~~~~-----------------------K  141 (200)
T 3cnh_A           85 SQPRPEVLALARDLGQRYRMYSLNNEGRDLNEYRIRTFGLGEFLLAFFTSSALGVM-----------------------K  141 (200)
T ss_dssp             CCBCHHHHHHHHHHTTTSEEEEEECCCHHHHHHHHHHHTGGGTCSCEEEHHHHSCC-----------------------T
T ss_pred             CccCccHHHHHHHHHHcCCEEEEeCCcHHHHHHHHHhCCHHHhcceEEeecccCCC-----------------------C
Confidence            458999999999986  368899999999999999999999999999999887764                       9


Q ss_pred             CCHHHHHHHHHHhCCCCCcEEEEeCChhcHHHHHHcCCeEEEECCC
Q 027403          133 PSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSS  178 (224)
Q Consensus       133 P~~~~~~~al~~~~~~~~~~l~VgDs~~Di~~A~~~G~~~v~v~~~  178 (224)
                      |+|.+|..+++++|++|++|++|||+.+|+.+|+++|+.++++.++
T Consensus       142 p~~~~~~~~~~~~~~~~~~~~~vgD~~~Di~~a~~aG~~~~~~~~~  187 (200)
T 3cnh_A          142 PNPAMYRLGLTLAQVRPEEAVMVDDRLQNVQAARAVGMHAVQCVDA  187 (200)
T ss_dssp             TCHHHHHHHHHHHTCCGGGEEEEESCHHHHHHHHHTTCEEEECSCH
T ss_pred             CCHHHHHHHHHHcCCCHHHeEEeCCCHHHHHHHHHCCCEEEEECCc
Confidence            9999999999999999999999999999999999999999999875

>2wf7_A Beta-PGM, beta-phosphoglucomutase; transition state analogue, haloacid dehalogenase superfamily, isomerase, phosphotransferase; HET: G7P; 1.05A {Lactococcus lactis} PDB: 1o03_A* 1z4n_A* 1z4o_A* 1zol_A 2wf5_A* 2wf6_A* 1o08_A* 2wf8_A* 2wf9_A* 2wfa_A 2whe_A 1lvh_A* 3fm9_A

Probab=99.66  E-value=1.2e-16  Score=129.46  Aligned_cols=116  Identities=19%  Similarity=0.232  Sum_probs=101.9

Q ss_pred             CCCCChhHHHHHhcCC---CCeEEEeCCChHHHHHHHHHcCCccccceeEeeccCCCCCCCCCCCCCcccccCCcccccc
Q 027403           54 KLKPDPVLRNLLLSMP---QRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRIL  130 (224)
Q Consensus        54 ~~~~~~g~~~~L~~l~---~~~~I~Tn~~~~~~~~~l~~lgl~~~fd~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  130 (224)
                      ...++|++.++|+.++   .+++++||+  ..+...++++|+.++|+.++++++.+..                      
T Consensus        89 ~~~~~~~~~~~l~~l~~~g~~~~i~t~~--~~~~~~l~~~~l~~~f~~~~~~~~~~~~----------------------  144 (221)
T 2wf7_A           89 PADVYPGILQLLKDLRSNKIKIALASAS--KNGPFLLERMNLTGYFDAIADPAEVAAS----------------------  144 (221)
T ss_dssp             GGGBCTTHHHHHHHHHHTTCEEEECCCC--TTHHHHHHHTTCGGGCSEECCTTTSSSC----------------------
T ss_pred             CCCCCCCHHHHHHHHHHCCCeEEEEcCc--HHHHHHHHHcChHHHcceEeccccCCCC----------------------
Confidence            4578899999999885   678899998  5567788999999999999998887764                      


Q ss_pred             CCCCHHHHHHHHHHhCCCCCcEEEEeCChhcHHHHHHcCCeEEEECCCCCCCCCceEeCCHhHH
Q 027403          131 CKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVPVPPADHALNSIHNI  194 (224)
Q Consensus       131 ~KP~~~~~~~al~~~~~~~~~~l~VgDs~~Di~~A~~~G~~~v~v~~~~~~~~~d~~i~~~~dl  194 (224)
                       ||+|.+|..+++++|++|++|++|||+.+|+.+|+++|+.+++++.......+++++.++.++
T Consensus       145 -Kp~~~~~~~~~~~lgi~~~~~i~iGD~~nDi~~a~~aG~~~~~~~~~~~~~~a~~v~~~~~el  207 (221)
T 2wf7_A          145 -KPAPDIFIAAAHAVGVAPSESIGLEDSQAGIQAIKDSGALPIGVGRPEDLGDDIVIVPDTSHY  207 (221)
T ss_dssp             -TTSSHHHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEESCHHHHCSSSEEESSGGGC
T ss_pred             -CCChHHHHHHHHHcCCChhHeEEEeCCHHHHHHHHHCCCEEEEECCHHHhccccchhcCHHhC
Confidence             999999999999999999999999999999999999999999996543323799999999986

>2i6x_A Hydrolase, haloacid dehalogenase-like family; HAD superfamily, struct genomics, PSI-2, protein structure initiative; HET: MSE; 2.40A {Porphyromonas gingivalis}

Probab=99.66  E-value=2.2e-16  Score=128.02  Aligned_cols=102  Identities=19%  Similarity=0.260  Sum_probs=94.0

Q ss_pred             CCCChhHHHHHhcCC--CCeEEEeCCChHHHHHHHHH------cCCccccceeEeeccCCCCCCCCCCCCCcccccCCcc
Q 027403           55 LKPDPVLRNLLLSMP--QRKIIFTNADQKHAMEVLGR------LGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSN  126 (224)
Q Consensus        55 ~~~~~g~~~~L~~l~--~~~~I~Tn~~~~~~~~~l~~------lgl~~~fd~ii~~~~~~~~~~~~~~~~~~~~~~~~~~  126 (224)
                      ..++|++.++|+.|+  ++++|+||++...+...+++      +|+..+|+.++++++++..                  
T Consensus        88 ~~~~~~~~~~l~~l~~g~~~~i~t~~~~~~~~~~~~~l~~~~~~~l~~~f~~~~~~~~~~~~------------------  149 (211)
T 2i6x_A           88 EEISAEKFDYIDSLRPDYRLFLLSNTNPYVLDLAMSPRFLPSGRTLDSFFDKVYASCQMGKY------------------  149 (211)
T ss_dssp             EEECHHHHHHHHHHTTTSEEEEEECCCHHHHHHHTSTTSSTTCCCGGGGSSEEEEHHHHTCC------------------
T ss_pred             cccChHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHhhhccccccCHHHHcCeEEeecccCCC------------------
Confidence            468899999999996  68899999999999999998      8999999999999887764                  


Q ss_pred             ccccCCCCHHHHHHHHHHhCCCCCcEEEEeCChhcHHHHHHcCCeEEEECCCC
Q 027403          127 QRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSV  179 (224)
Q Consensus       127 ~~~~~KP~~~~~~~al~~~~~~~~~~l~VgDs~~Di~~A~~~G~~~v~v~~~~  179 (224)
                           ||+|.+|..+++++|++|++|++|||+.+|+.+|+++|+.++++.++.
T Consensus       150 -----Kp~~~~~~~~~~~~~~~~~~~~~igD~~~Di~~a~~aG~~~~~~~~~~  197 (211)
T 2i6x_A          150 -----KPNEDIFLEMIADSGMKPEETLFIDDGPANVATAERLGFHTYCPDNGE  197 (211)
T ss_dssp             -----TTSHHHHHHHHHHHCCCGGGEEEECSCHHHHHHHHHTTCEEECCCTTC
T ss_pred             -----CCCHHHHHHHHHHhCCChHHeEEeCCCHHHHHHHHHcCCEEEEECCHH
Confidence                 999999999999999999999999999999999999999999997763

>2fpr_A Histidine biosynthesis bifunctional protein HISB; histidinola phosphate phosphatase, bifunctional enzyme structural genomics; 1.70A {Escherichia coli} SCOP: c.108.1.19 PDB: 2fps_A 2fpu_A* 2fpx_A 2fpw_A*

Probab=99.65  E-value=4.3e-17  Score=131.99  Aligned_cols=101  Identities=20%  Similarity=0.362  Sum_probs=86.2

Q ss_pred             CCCCChhHHHHHhcCC---CCeEEEeCC---------------ChHHHHHHHHHcCCccccceeEee-----ccCCCCCC
Q 027403           54 KLKPDPVLRNLLLSMP---QRKIIFTNA---------------DQKHAMEVLGRLGLEDCFEGIICF-----ETINPRLQ  110 (224)
Q Consensus        54 ~~~~~~g~~~~L~~l~---~~~~I~Tn~---------------~~~~~~~~l~~lgl~~~fd~ii~~-----~~~~~~~~  110 (224)
                      .++++||+.++|+.|+   ++++|+||+               +...+...++.+|+.  |+.++.+     ++...+  
T Consensus        40 ~~~~~pg~~e~L~~L~~~G~~l~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~--fd~v~~s~~~~~~~~~~~--  115 (176)
T 2fpr_A           40 KLAFEPGVIPQLLKLQKAGYKLVMITNQDGLGTQSFPQADFDGPHNLMMQIFTSQGVQ--FDEVLICPHLPADECDCR--  115 (176)
T ss_dssp             GCCBCTTHHHHHHHHHHTTEEEEEEEECTTTTBTTBCHHHHHHHHHHHHHHHHHTTCC--EEEEEEECCCGGGCCSSS--
T ss_pred             HCcCCccHHHHHHHHHHCCCEEEEEECCccccccccchHhhhhhHHHHHHHHHHcCCC--eeEEEEcCCCCccccccc--
Confidence            5789999999999996   678999998               577888999999997  8988654     555553  


Q ss_pred             CCCCCCCcccccCCccccccCCCCHHHHHHHHHHhCCCCCcEEEEeCChhcHHHHHHcCCeEEEECCCC
Q 027403          111 PADNTDGIENNSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSV  179 (224)
Q Consensus       111 ~~~~~~~~~~~~~~~~~~~~~KP~~~~~~~al~~~~~~~~~~l~VgDs~~Di~~A~~~G~~~v~v~~~~  179 (224)
                                           ||+|.+|..++++++++|++|+||||+.+|+.+|+++|+.++++.++.
T Consensus       116 ---------------------KP~p~~~~~~~~~~gi~~~~~l~VGD~~~Di~~A~~aG~~~i~v~~~~  163 (176)
T 2fpr_A          116 ---------------------KPKVKLVERYLAEQAMDRANSYVIGDRATDIQLAENMGINGLRYDRET  163 (176)
T ss_dssp             ---------------------TTSCGGGGGGC----CCGGGCEEEESSHHHHHHHHHHTSEEEECBTTT
T ss_pred             ---------------------CCCHHHHHHHHHHcCCCHHHEEEEcCCHHHHHHHHHcCCeEEEEcCCc
Confidence                                 999999999999999999999999999999999999999999998874

>2b0c_A Putative phosphatase; alpha-D-glucose-1-phosphate, structural genomic protein structure initiative, midwest center for structural genomics, MCSG; HET: G1P; 2.00A {Escherichia coli} SCOP: c.108.1.2

Probab=99.62  E-value=1.3e-16  Score=128.74  Aligned_cols=102  Identities=21%  Similarity=0.396  Sum_probs=91.5

Q ss_pred             CCCChhHHHHHhcCC---CCeEEEeCCChHHHHHHHHH-cCCccccceeEeeccCCCCCCCCCCCCCcccccCCcccccc
Q 027403           55 LKPDPVLRNLLLSMP---QRKIIFTNADQKHAMEVLGR-LGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRIL  130 (224)
Q Consensus        55 ~~~~~g~~~~L~~l~---~~~~I~Tn~~~~~~~~~l~~-lgl~~~fd~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  130 (224)
                      ..++|++.++|+.|+   .+++|+||++...+...+.+ +|+.++|+.++++++.+..                      
T Consensus        90 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~~~~~~~l~~~f~~~~~~~~~~~~----------------------  147 (206)
T 2b0c_A           90 VALRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEEYPEIRDAADHIYLSQDLGMR----------------------  147 (206)
T ss_dssp             EEECHHHHHHHHHHHHTTCEEEEEECCCCCTTSCCGGGCHHHHHHCSEEEEHHHHTCC----------------------
T ss_pred             cccCccHHHHHHHHHHCCCeEEEEECCChHHHHHHHHhccChhhheeeEEEecccCCC----------------------
Confidence            578999999999986   67899999988777666666 7888899999999887764                      


Q ss_pred             CCCCHHHHHHHHHHhCCCCCcEEEEeCChhcHHHHHHcCCeEEEECCCC
Q 027403          131 CKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSV  179 (224)
Q Consensus       131 ~KP~~~~~~~al~~~~~~~~~~l~VgDs~~Di~~A~~~G~~~v~v~~~~  179 (224)
                       ||+|.+|..+++++|++|++|++|||+.+|+.+|+++|+.++++.++.
T Consensus       148 -Kp~~~~~~~~~~~~~~~~~~~~~vgD~~~Di~~a~~aG~~~~~~~~~~  195 (206)
T 2b0c_A          148 -KPEARIYQHVLQAEGFSPSDTVFFDDNADNIEGANQLGITSILVKDKT  195 (206)
T ss_dssp             -TTCHHHHHHHHHHHTCCGGGEEEEESCHHHHHHHHTTTCEEEECCSTT
T ss_pred             -CCCHHHHHHHHHHcCCCHHHeEEeCCCHHHHHHHHHcCCeEEEecCCc
Confidence             999999999999999999999999999999999999999999998763

>2qlt_A (DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, saccharom cerevisiae, structural genomics, PSI-2, protein structure initiative; 1.60A {Saccharomyces cerevisiae}

Probab=99.61  E-value=2.5e-15  Score=128.33  Aligned_cols=119  Identities=19%  Similarity=0.197  Sum_probs=105.3

Q ss_pred             CCCCCChhHHHHHhcCC----CCeEEEeCCChHHHHHHHHHcCCccccceeEeeccCCCCCCCCCCCCCcccccCCcccc
Q 027403           53 EKLKPDPVLRNLLLSMP----QRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQR  128 (224)
Q Consensus        53 ~~~~~~~g~~~~L~~l~----~~~~I~Tn~~~~~~~~~l~~lgl~~~fd~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~  128 (224)
                      ....++||+.++|+.++    .+++|+||++...+...++.+|+. .|+.+++++++...                    
T Consensus       111 ~~~~~~~g~~~~L~~l~~~~g~~l~i~T~~~~~~~~~~l~~~~l~-~f~~i~~~~~~~~~--------------------  169 (275)
T 2qlt_A          111 EHSIEVPGAVKLCNALNALPKEKWAVATSGTRDMAKKWFDILKIK-RPEYFITANDVKQG--------------------  169 (275)
T ss_dssp             TTCEECTTHHHHHHHHHTSCGGGEEEECSSCHHHHHHHHHHHTCC-CCSSEECGGGCSSC--------------------
T ss_pred             cCCCcCcCHHHHHHHHHhccCCeEEEEeCCCHHHHHHHHHHcCCC-ccCEEEEcccCCCC--------------------
Confidence            44678899999999885    457899999999999999999986 58888988887664                    


Q ss_pred             ccCCCCHHHHHHHHHHhCC-------CCCcEEEEeCChhcHHHHHHcCCeEEEECCCCC-----CCCCceEeCCHhHHH
Q 027403          129 ILCKPSLEAIETAIRIANV-------DPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP-----VPPADHALNSIHNIK  195 (224)
Q Consensus       129 ~~~KP~~~~~~~al~~~~~-------~~~~~l~VgDs~~Di~~A~~~G~~~v~v~~~~~-----~~~~d~~i~~~~dl~  195 (224)
                         ||+|.+|..+++.+|+       +|++|++|||+.+|+.+|+++|+.+++|.++..     ...++++++++.+|.
T Consensus       170 ---kp~~~~~~~~~~~lgi~~~~~~~~~~~~i~~GDs~nDi~~a~~AG~~~i~v~~~~~~~~~~~~~ad~v~~~~~el~  245 (275)
T 2qlt_A          170 ---KPHPEPYLKGRNGLGFPINEQDPSKSKVVVFEDAPAGIAAGKAAGCKIVGIATTFDLDFLKEKGCDIIVKNHESIR  245 (275)
T ss_dssp             ---TTSSHHHHHHHHHTTCCCCSSCGGGSCEEEEESSHHHHHHHHHTTCEEEEESSSSCHHHHTTSSCSEEESSGGGEE
T ss_pred             ---CCChHHHHHHHHHcCCCccccCCCcceEEEEeCCHHHHHHHHHcCCEEEEECCCCCHHHHhhCCCCEEECChHHcC
Confidence               9999999999999999       999999999999999999999999999998754     336899999998875

>3m1y_A Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, phophoserine phosphatase, protein structure initiative, structural genomics; 2.40A {Helicobacter pylori} SCOP: c.108.1.0

Probab=99.60  E-value=9.8e-16  Score=124.48  Aligned_cols=121  Identities=16%  Similarity=0.190  Sum_probs=96.8

Q ss_pred             CCCChhHHHHHhcCC---CCeEEEeCCChHHHHHHHHHcCCccccceeEeeccCCCCCCCCCCCCCcccccCCccccccC
Q 027403           55 LKPDPVLRNLLLSMP---QRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILC  131 (224)
Q Consensus        55 ~~~~~g~~~~L~~l~---~~~~I~Tn~~~~~~~~~l~~lgl~~~fd~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  131 (224)
                      +.++||+.++|+.|+   ++++|+||++...+...++.+|+..+|+.+++.++...             ....+.....+
T Consensus        74 ~~~~~~~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~gl~~~f~~~~~~~~~~~-------------~~~~~~~~~~~  140 (217)
T 3m1y_A           74 LPLFEGALELVSALKEKNYKVVCFSGGFDLATNHYRDLLHLDAAFSNTLIVENDAL-------------NGLVTGHMMFS  140 (217)
T ss_dssp             CCBCBTHHHHHHHHHTTTEEEEEEEEEEHHHHHHHHHHHTCSEEEEEEEEEETTEE-------------EEEEEESCCST
T ss_pred             CcCCCCHHHHHHHHHHCCCEEEEEcCCchhHHHHHHHHcCcchhccceeEEeCCEE-------------EeeeccCCCCC
Confidence            679999999999996   56889999999999999999999999999876554110             00000011125


Q ss_pred             CCCHHHHHHHHHHhCCCCCcEEEEeCChhcHHHHHHcCCeEEEECCCCC--CCCCceEeCC
Q 027403          132 KPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP--VPPADHALNS  190 (224)
Q Consensus       132 KP~~~~~~~al~~~~~~~~~~l~VgDs~~Di~~A~~~G~~~v~v~~~~~--~~~~d~~i~~  190 (224)
                      ||++.+|..+++++|++|++|++|||+.+|+.+|+++|+.+++  .+..  ...+|+++++
T Consensus       141 k~k~~~~~~~~~~~g~~~~~~i~vGDs~~Di~~a~~aG~~~~~--~~~~~l~~~ad~v~~~  199 (217)
T 3m1y_A          141 HSKGEMLLVLQRLLNISKTNTLVVGDGANDLSMFKHAHIKIAF--NAKEVLKQHATHCINE  199 (217)
T ss_dssp             THHHHHHHHHHHHHTCCSTTEEEEECSGGGHHHHTTCSEEEEE--SCCHHHHTTCSEEECS
T ss_pred             CChHHHHHHHHHHcCCCHhHEEEEeCCHHHHHHHHHCCCeEEE--CccHHHHHhcceeecc
Confidence            9999999999999999999999999999999999999999877  3322  5668998864

>2wm8_A MDP-1, magnesium-dependent phosphatase 1; haloacid dehalogenase, protein phosphatase, hydrolase, magne metal-binding; 1.75A {Homo sapiens} PDB: 1u7o_A 1u7p_A

Probab=99.60  E-value=2.9e-15  Score=121.41  Aligned_cols=98  Identities=16%  Similarity=0.239  Sum_probs=89.1

Q ss_pred             CCCCChhHHHHHhcCC---CCeEEEeCCC-hHHHHHHHHHcCCccccceeEeeccCCCCCCCCCCCCCcccccCCccccc
Q 027403           54 KLKPDPVLRNLLLSMP---QRKIIFTNAD-QKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRI  129 (224)
Q Consensus        54 ~~~~~~g~~~~L~~l~---~~~~I~Tn~~-~~~~~~~l~~lgl~~~fd~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  129 (224)
                      ...++||+.++|+.|+   ++++|+||++ ...+...++.+|+.++|+.+++..                          
T Consensus        66 ~~~~~~g~~e~L~~L~~~G~~v~ivT~~~~~~~~~~~l~~~gl~~~f~~~~~~~--------------------------  119 (187)
T 2wm8_A           66 DVRLYPEVPEVLKRLQSLGVPGAAASRTSEIEGANQLLELFDLFRYFVHREIYP--------------------------  119 (187)
T ss_dssp             EECCCTTHHHHHHHHHHHTCCEEEEECCSCHHHHHHHHHHTTCTTTEEEEEESS--------------------------
T ss_pred             ccCcchhHHHHHHHHHHCCceEEEEeCCCChHHHHHHHHHcCcHhhcceeEEEe--------------------------
Confidence            4678999999999996   7899999999 799999999999999999875432                          


Q ss_pred             cCCCCHHHHHHHHHHhCCCCCcEEEEeCChhcHHHHHHcCCeEEEECCCC
Q 027403          130 LCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSV  179 (224)
Q Consensus       130 ~~KP~~~~~~~al~~~~~~~~~~l~VgDs~~Di~~A~~~G~~~v~v~~~~  179 (224)
                        +|++..|..++++++++|++|+||||+.+|+.+|+++|++++++.++.
T Consensus       120 --~~k~~~~~~~~~~~~~~~~~~~~igD~~~Di~~a~~aG~~~i~v~~g~  167 (187)
T 2wm8_A          120 --GSKITHFERLQQKTGIPFSQMIFFDDERRNIVDVSKLGVTCIHIQNGM  167 (187)
T ss_dssp             --SCHHHHHHHHHHHHCCCGGGEEEEESCHHHHHHHHTTTCEEEECSSSC
T ss_pred             --CchHHHHHHHHHHcCCChHHEEEEeCCccChHHHHHcCCEEEEECCCC
Confidence              678899999999999999999999999999999999999999999875

>2p11_A Hypothetical protein; putative haloacid dehalogenase-like hydrolase, structural GE joint center for structural genomics, JCSG; 2.20A {Burkholderia xenovorans}

Probab=99.59  E-value=4.1e-16  Score=129.59  Aligned_cols=120  Identities=21%  Similarity=0.199  Sum_probs=99.9

Q ss_pred             CCCCChhHHHHHhcCC--CCeEEEeCCChHHHHHHHHHcCCccccceeEeeccCCCCCCCCCCCCCcccccCCccccccC
Q 027403           54 KLKPDPVLRNLLLSMP--QRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILC  131 (224)
Q Consensus        54 ~~~~~~g~~~~L~~l~--~~~~I~Tn~~~~~~~~~l~~lgl~~~fd~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  131 (224)
                      ...++||+.++|+.|+  .+++|+||++...+...++++|+.++|+.+++..                            
T Consensus        94 ~~~~~~g~~~~l~~l~~~g~~~i~Tn~~~~~~~~~l~~~gl~~~f~~~~~~~----------------------------  145 (231)
T 2p11_A           94 ASRVYPGALNALRHLGARGPTVILSDGDVVFQPRKIARSGLWDEVEGRVLIY----------------------------  145 (231)
T ss_dssp             GGGBCTTHHHHHHHHHTTSCEEEEEECCSSHHHHHHHHTTHHHHTTTCEEEE----------------------------
T ss_pred             hCCcCccHHHHHHHHHhCCCEEEEeCCCHHHHHHHHHHcCcHHhcCeeEEec----------------------------
Confidence            4679999999999986  4788999999999999999999999998766522                            


Q ss_pred             CCCHHHHHHHHHHhCCCCCcEEEEeCChh---cHHHHHHcCCeEEEECCCCC--------CC-CCceEeCCHhHHHHHHH
Q 027403          132 KPSLEAIETAIRIANVDPKKTIFFDDSAR---NIASAKAAGLHTVIVGSSVP--------VP-PADHALNSIHNIKEAIP  199 (224)
Q Consensus       132 KP~~~~~~~al~~~~~~~~~~l~VgDs~~---Di~~A~~~G~~~v~v~~~~~--------~~-~~d~~i~~~~dl~~~i~  199 (224)
                      ++++..+..+++  +++|++|+||||+.+   |+.+|+++|++++++.++..        .. .++++++++.+|.+++.
T Consensus       146 ~~K~~~~~~~~~--~~~~~~~~~vgDs~~d~~di~~A~~aG~~~i~v~~g~~~~~~~~l~~~~~~~~~i~~~~el~~~l~  223 (231)
T 2p11_A          146 IHKELMLDQVME--CYPARHYVMVDDKLRILAAMKKAWGARLTTVFPRQGHYAFDPKEISSHPPADVTVERIGDLVEMDA  223 (231)
T ss_dssp             SSGGGCHHHHHH--HSCCSEEEEECSCHHHHHHHHHHHGGGEEEEEECCSSSSSCHHHHHHSCCCSEEESSGGGGGGCGG
T ss_pred             CChHHHHHHHHh--cCCCceEEEEcCccchhhhhHHHHHcCCeEEEeCCCCCCCcchhccccCCCceeecCHHHHHHHHH
Confidence            333567777766  789999999999998   99999999999999998742        12 48999999999988776


Q ss_pred             HHHh
Q 027403          200 EIWE  203 (224)
Q Consensus       200 ~~~~  203 (224)
                      +++.
T Consensus       224 ~~~~  227 (231)
T 2p11_A          224 EWLL  227 (231)
T ss_dssp             GGCC
T ss_pred             HHHH
Confidence            6543

>1rku_A Homoserine kinase; phosphoserine phosphatase, phosphoserine:homoserine phosphotransferase, THRH, phosphoserine phosphoryl donor; 1.47A {Pseudomonas aeruginosa} SCOP: c.108.1.11 PDB: 1rkv_A

Probab=99.58  E-value=7e-16  Score=125.25  Aligned_cols=128  Identities=9%  Similarity=0.019  Sum_probs=103.1

Q ss_pred             CCCCChhHHHHHhcCC--CCeEEEeCCChHHHHHHHHHcCCcccc-ceeEeeccCCCCCCCCCCCCCcccccCCcccccc
Q 027403           54 KLKPDPVLRNLLLSMP--QRKIIFTNADQKHAMEVLGRLGLEDCF-EGIICFETINPRLQPADNTDGIENNSFSSNQRIL  130 (224)
Q Consensus        54 ~~~~~~g~~~~L~~l~--~~~~I~Tn~~~~~~~~~l~~lgl~~~f-d~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  130 (224)
                      .+.++||+.++|+.|+  ++++|+||++...+...++++|+..+| +.++++++....                     .
T Consensus        67 ~~~~~~g~~~~l~~l~~~~~~~i~s~~~~~~~~~~l~~~gl~~~f~~~~~~~~~~~~~---------------------~  125 (206)
T 1rku_A           67 TLKPLEGAVEFVDWLRERFQVVILSDTFYEFSQPLMRQLGFPTLLCHKLEIDDSDRVV---------------------G  125 (206)
T ss_dssp             TCCCCTTHHHHHHHHHTTSEEEEEEEEEHHHHHHHHHHTTCCCEEEEEEEECTTSCEE---------------------E
T ss_pred             hcCCCccHHHHHHHHHhcCcEEEEECChHHHHHHHHHHcCCcceecceeEEcCCceEE---------------------e
Confidence            4678999999999987  678899999999999999999999999 567766654210                     0


Q ss_pred             C-CCCHHHHHHHHHHhCCCCCcEEEEeCChhcHHHHHHcCCeEEEECCCCC--CCCCceE-eCCHhHHHHHHHHHHh
Q 027403          131 C-KPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP--VPPADHA-LNSIHNIKEAIPEIWE  203 (224)
Q Consensus       131 ~-KP~~~~~~~al~~~~~~~~~~l~VgDs~~Di~~A~~~G~~~v~v~~~~~--~~~~d~~-i~~~~dl~~~i~~~~~  203 (224)
                      . ||+|..|..++++++++|++|++|||+.+|+.+|+++|+.+++ .....  ...++++ ++++.++.++|..++.
T Consensus       126 ~~~p~p~~~~~~l~~l~~~~~~~~~iGD~~~Di~~a~~aG~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~  201 (206)
T 1rku_A          126 YQLRQKDPKRQSVIAFKSLYYRVIAAGDSYNDTTMLSEAHAGILF-HAPENVIREFPQFPAVHTYEDLKREFLKASS  201 (206)
T ss_dssp             EECCSSSHHHHHHHHHHHTTCEEEEEECSSTTHHHHHHSSEEEEE-SCCHHHHHHCTTSCEECSHHHHHHHHHHHCS
T ss_pred             eecCCCchHHHHHHHHHhcCCEEEEEeCChhhHHHHHhcCccEEE-CCcHHHHHHHhhhccccchHHHHHHHHHHhc
Confidence            1 4888999999999999999999999999999999999998664 32211  2235664 9999999998877653

>2ho4_A Haloacid dehalogenase-like hydrolase domain containing 2; HDHD2, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; 2.20A {Mus musculus} PDB: 3hlt_A

Probab=99.58  E-value=3.2e-16  Score=131.19  Aligned_cols=120  Identities=15%  Similarity=0.133  Sum_probs=100.6

Q ss_pred             CChhHHHHHhcCC--CCeEEEeCCChHHHHHHHHHcCCccccc---eeEeeccCCCCCCCCCCCCCcccccCCccccccC
Q 027403           57 PDPVLRNLLLSMP--QRKIIFTNADQKHAMEVLGRLGLEDCFE---GIICFETINPRLQPADNTDGIENNSFSSNQRILC  131 (224)
Q Consensus        57 ~~~g~~~~L~~l~--~~~~I~Tn~~~~~~~~~l~~lgl~~~fd---~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  131 (224)
                      +++++.++|..++  .++ ++||.+.......+..+|+.++|+   .+++++++..                       +
T Consensus       123 ~~~~~~~~l~~l~~~~~~-i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------------~  178 (259)
T 2ho4_A          123 HYQLLNQAFRLLLDGAPL-IAIHKARYYKRKDGLALGPGPFVTALEYATDTKAMVV-----------------------G  178 (259)
T ss_dssp             BHHHHHHHHHHHHTTCCE-EESCCCSEEEETTEEEECSHHHHHHHHHHHTCCCEEC-----------------------S
T ss_pred             CHHHHHHHHHHHHCCCEE-EEECCCCcCcccCCcccCCcHHHHHHHHHhCCCceEe-----------------------c
Confidence            6789998888875  556 999988766555667788888887   4566666655                       3


Q ss_pred             CCCHHHHHHHHHHhCCCCCcEEEEeCCh-hcHHHHHHcCCeEEEECCCCC--------CCCCceEeCCHhHHHHHHHH
Q 027403          132 KPSLEAIETAIRIANVDPKKTIFFDDSA-RNIASAKAAGLHTVIVGSSVP--------VPPADHALNSIHNIKEAIPE  200 (224)
Q Consensus       132 KP~~~~~~~al~~~~~~~~~~l~VgDs~-~Di~~A~~~G~~~v~v~~~~~--------~~~~d~~i~~~~dl~~~i~~  200 (224)
                      ||+|.+|..+++++|++|++|++|||+. +|+.+|+++|++++++.++..        ...++++++++.++.+++.+
T Consensus       179 Kp~~~~~~~~~~~lgi~~~~~~~iGD~~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~~~~~~~~~~l~~l~~~l~~  256 (259)
T 2ho4_A          179 KPEKTFFLEALRDADCAPEEAVMIGDDCRDDVDGAQNIGMLGILVKTGKYKAADEEKINPPPYLTCESFPHAVDHILQ  256 (259)
T ss_dssp             TTSHHHHHHHGGGGTCCGGGEEEEESCTTTTHHHHHHTTCEEEEESSTTCCTTGGGGSSSCCSEEESCHHHHHHHHHH
T ss_pred             CCCHHHHHHHHHHcCCChHHEEEECCCcHHHHHHHHHCCCcEEEECCCCCCcccccccCCCCCEEECCHHHHHHHHHH
Confidence            9999999999999999999999999998 999999999999999998732        24589999999999887754

>3i28_A Epoxide hydrolase 2; aromatic hydrocarbons catabolism, detoxification, magnesium, metal-binding, peroxisome; HET: 34N; 1.95A {Homo sapiens} PDB: 1s8o_A* 1zd2_P* 1vj5_A* 1zd4_A* 1zd5_A* 3i1y_A* 1zd3_A* 3koo_A* 3otq_A* 4hai_A* 1cqz_A 1cr6_A* 1ek1_A* 1ek2_A* 3ans_A* 3ant_A* 3pdc_A*

Probab=99.56  E-value=1.3e-15  Score=138.12  Aligned_cols=101  Identities=22%  Similarity=0.316  Sum_probs=86.3

Q ss_pred             CCCChhHHHHHhcCC---CCeEEEeCC--ChHHHHHHHHHc--CCccccceeEeeccCCCCCCCCCCCCCcccccCCccc
Q 027403           55 LKPDPVLRNLLLSMP---QRKIIFTNA--DQKHAMEVLGRL--GLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQ  127 (224)
Q Consensus        55 ~~~~~g~~~~L~~l~---~~~~I~Tn~--~~~~~~~~l~~l--gl~~~fd~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~  127 (224)
                      ..++||+.++|+.|+   ++++|+||+  ........+..+  |+.++||.++++++++..                   
T Consensus        99 ~~~~~~~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~~~~~~~~~~l~~~fd~i~~~~~~~~~-------------------  159 (555)
T 3i28_A           99 RKINRPMLQAALMLRKKGFTTAILTNTWLDDRAERDGLAQLMCELKMHFDFLIESCQVGMV-------------------  159 (555)
T ss_dssp             CEECHHHHHHHHHHHHTTCEEEEEECCCCCCSTTHHHHHHHHHHHHTTSSEEEEHHHHTCC-------------------
T ss_pred             cCcChhHHHHHHHHHHCCCEEEEEeCCCccccchhhHHHHHhhhhhhheeEEEeccccCCC-------------------
Confidence            578999999999996   789999998  222222223333  677899999999998875                   


Q ss_pred             cccCCCCHHHHHHHHHHhCCCCCcEEEEeCChhcHHHHHHcCCeEEEECCC
Q 027403          128 RILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSS  178 (224)
Q Consensus       128 ~~~~KP~~~~~~~al~~~~~~~~~~l~VgDs~~Di~~A~~~G~~~v~v~~~  178 (224)
                          ||+|++|..+++++|++|++|++|||+.+|+.+|+++|++++++.++
T Consensus       160 ----KP~p~~~~~~~~~lg~~p~~~~~v~D~~~di~~a~~aG~~~~~~~~~  206 (555)
T 3i28_A          160 ----KPEPQIYKFLLDTLKASPSEVVFLDDIGANLKPARDLGMVTILVQDT  206 (555)
T ss_dssp             ----TTCHHHHHHHHHHHTCCGGGEEEEESCHHHHHHHHHHTCEEEECSSH
T ss_pred             ----CCCHHHHHHHHHHcCCChhHEEEECCcHHHHHHHHHcCCEEEEECCC
Confidence                99999999999999999999999999999999999999999999765

>1nnl_A L-3-phosphoserine phosphatase; PSP, HPSP, phospho-aspartyl, hydrolase; 1.53A {Homo sapiens} SCOP: c.108.1.4 PDB: 1l8l_A* 1l8o_A

Probab=99.55  E-value=3.9e-15  Score=122.39  Aligned_cols=124  Identities=13%  Similarity=0.129  Sum_probs=97.0

Q ss_pred             CCCCChhHHHHHhcCC---CCeEEEeCCChHHHHHHHHHcCCc--cccceeE--------eeccCCCCCCCCCCCCCccc
Q 027403           54 KLKPDPVLRNLLLSMP---QRKIIFTNADQKHAMEVLGRLGLE--DCFEGII--------CFETINPRLQPADNTDGIEN  120 (224)
Q Consensus        54 ~~~~~~g~~~~L~~l~---~~~~I~Tn~~~~~~~~~l~~lgl~--~~fd~ii--------~~~~~~~~~~~~~~~~~~~~  120 (224)
                      ..+++||+.++|+.|+   ++++|+||++...+...++++|+.  ++|+.++        ++.+...             
T Consensus        84 ~~~~~~g~~~~l~~L~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~~~f~~~~~~~~~~~~~~~~~~~-------------  150 (225)
T 1nnl_A           84 PPHLTPGIRELVSRLQERNVQVFLISGGFRSIVEHVASKLNIPATNVFANRLKFYFNGEYAGFDETQ-------------  150 (225)
T ss_dssp             CCCBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCCGGGEEEECEEECTTSCEEEECTTS-------------
T ss_pred             cCCCCccHHHHHHHHHHCCCcEEEEeCChHHHHHHHHHHcCCCcccEEeeeEEEcCCCcEecCCCCC-------------
Confidence            4679999999999996   678999999999999999999997  4887764        2322211             


Q ss_pred             ccCCccccccCCCCHHHHHHHHHHhCCCCCcEEEEeCChhcHHHHHHcCCeEEEECCCCC----CCCCceEeCCHhHHHH
Q 027403          121 NSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP----VPPADHALNSIHNIKE  196 (224)
Q Consensus       121 ~~~~~~~~~~~KP~~~~~~~al~~~~~~~~~~l~VgDs~~Di~~A~~~G~~~v~v~~~~~----~~~~d~~i~~~~dl~~  196 (224)
                            ....+||+|.+|..+++++|+  ++|++|||+.+|+.+|+++|+ ++++..+..    ...++++++++.++.+
T Consensus       151 ------~~~~~~~Kp~~~~~~~~~~~~--~~~~~vGDs~~Di~~a~~ag~-~i~~~~~~~~~~~~~~~~~~~~~~~el~~  221 (225)
T 1nnl_A          151 ------PTAESGGKGKVIKLLKEKFHF--KKIIMIGDGATDMEACPPADA-FIGFGGNVIRQQVKDNAKWYITDFVELLG  221 (225)
T ss_dssp             ------GGGSTTHHHHHHHHHHHHHCC--SCEEEEESSHHHHTTTTTSSE-EEEECSSCCCHHHHHHCSEEESCGGGGCC
T ss_pred             ------cccCCCchHHHHHHHHHHcCC--CcEEEEeCcHHhHHHHHhCCe-EEEecCccccHHHHhcCCeeecCHHHHHH
Confidence                  001136788999999999998  789999999999999999999 888865432    2348999999999876


Q ss_pred             HHH
Q 027403          197 AIP  199 (224)
Q Consensus       197 ~i~  199 (224)
                      ++.
T Consensus       222 ~l~  224 (225)
T 1nnl_A          222 ELE  224 (225)
T ss_dssp             ---
T ss_pred             HHh
Confidence            653

>2fea_A 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; 2633731, structural genomics, joint center for structural GE JCSG; HET: MSE; 2.00A {Bacillus subtilis} SCOP: c.108.1.20

Probab=99.54  E-value=1.5e-15  Score=126.91  Aligned_cols=128  Identities=12%  Similarity=0.109  Sum_probs=100.8

Q ss_pred             CCCCChhHHHHHhcCC---CCeEEEeCCChHHHHHHHHHcCCccccceeEeeccCCCCCCCCCCCCCcccccCCcccccc
Q 027403           54 KLKPDPVLRNLLLSMP---QRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRIL  130 (224)
Q Consensus        54 ~~~~~~g~~~~L~~l~---~~~~I~Tn~~~~~~~~~l~~lgl~~~fd~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  130 (224)
                      ...++||+.++|+.|+   ++++|+||++...+...++  |+.++ +.+++++.....            ..+   ....
T Consensus        75 ~~~~~pg~~~~l~~L~~~g~~~~ivS~~~~~~~~~~l~--~l~~~-~~v~~~~~~~~~------------~~~---~~~~  136 (236)
T 2fea_A           75 DAKIREGFREFVAFINEHEIPFYVISGGMDFFVYPLLE--GIVEK-DRIYCNHASFDN------------DYI---HIDW  136 (236)
T ss_dssp             HCCBCTTHHHHHHHHHHHTCCEEEEEEEEHHHHHHHHT--TTSCG-GGEEEEEEECSS------------SBC---EEEC
T ss_pred             CCCCCccHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHh--cCCCC-CeEEeeeeEEcC------------Cce---EEec
Confidence            3679999999999996   7899999999998888888  88676 889988765421            000   0000


Q ss_pred             CCCCHHH-HH-------HHHHHhCCCCCcEEEEeCChhcHHHHHHcCCeEEEECCCCC----CC-CCceEeCCHhHHHHH
Q 027403          131 CKPSLEA-IE-------TAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP----VP-PADHALNSIHNIKEA  197 (224)
Q Consensus       131 ~KP~~~~-~~-------~al~~~~~~~~~~l~VgDs~~Di~~A~~~G~~~v~v~~~~~----~~-~~d~~i~~~~dl~~~  197 (224)
                      +||+|.. +.       .++++++++|++|+||||+.+|+.+|+++|+.++.  ++..    .. .++++++++.+|.++
T Consensus       137 ~kp~p~~~~~~~~~~K~~~~~~~~~~~~~~~~vGDs~~Di~~a~~aG~~~~~--~~~~~~~~~~~~~~~~~~~~~el~~~  214 (236)
T 2fea_A          137 PHSCKGTCSNQCGCCKPSVIHELSEPNQYIIMIGDSVTDVEAAKLSDLCFAR--DYLLNECREQNLNHLPYQDFYEIRKE  214 (236)
T ss_dssp             TTCCCTTCCSCCSSCHHHHHHHHCCTTCEEEEEECCGGGHHHHHTCSEEEEC--HHHHHHHHHTTCCEECCSSHHHHHHH
T ss_pred             CCCCccccccccCCcHHHHHHHHhccCCeEEEEeCChHHHHHHHhCCeeeec--hHHHHHHHHCCCCeeecCCHHHHHHH
Confidence            3888884 55       89999999999999999999999999999998863  2211    23 378999999999998


Q ss_pred             HHHH
Q 027403          198 IPEI  201 (224)
Q Consensus       198 i~~~  201 (224)
                      |..+
T Consensus       215 l~~~  218 (236)
T 2fea_A          215 IENV  218 (236)
T ss_dssp             HHTS
T ss_pred             HHHh
Confidence            8765

>2fi1_A Hydrolase, haloacid dehalogenase-like family; structural genomics, haloacid dehalogenase-like F PSI, protein structure initiative; 1.40A {Streptococcus pneumoniae} SCOP: c.108.1.3

Probab=99.54  E-value=2.8e-14  Score=113.54  Aligned_cols=97  Identities=19%  Similarity=0.277  Sum_probs=88.2

Q ss_pred             CCChhHHHHHhcCC---CCeEEEeCCChHHHHHHHHHcCCccccceeEeeccCCCCCCCCCCCCCcccccCCccccccCC
Q 027403           56 KPDPVLRNLLLSMP---QRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCK  132 (224)
Q Consensus        56 ~~~~g~~~~L~~l~---~~~~I~Tn~~~~~~~~~l~~lgl~~~fd~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~K  132 (224)
                      .++|++.++|+.++   .+++++||++. .+...++++|+.++|+.+++++++...                       |
T Consensus        82 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~-~~~~~l~~~~~~~~f~~~~~~~~~~~~-----------------------k  137 (190)
T 2fi1_A           82 ILFEGVSDLLEDISNQGGRHFLVSHRND-QVLEILEKTSIAAYFTEVVTSSSGFKR-----------------------K  137 (190)
T ss_dssp             CBCTTHHHHHHHHHHTTCEEEEECSSCT-HHHHHHHHTTCGGGEEEEECGGGCCCC-----------------------T
T ss_pred             ccCcCHHHHHHHHHHCCCcEEEEECCcH-HHHHHHHHcCCHhheeeeeeccccCCC-----------------------C
Confidence            38999999999885   67889999875 678899999999999999999887764                       9


Q ss_pred             CCHHHHHHHHHHhCCCCCcEEEEeCChhcHHHHHHcCCeEEEECCC
Q 027403          133 PSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSS  178 (224)
Q Consensus       133 P~~~~~~~al~~~~~~~~~~l~VgDs~~Di~~A~~~G~~~v~v~~~  178 (224)
                      |++.+|..+++++|++  +|++|||+.+|+.+|+++|+.++++.++
T Consensus       138 p~~~~~~~~~~~~~~~--~~~~iGD~~~Di~~a~~aG~~~~~~~~~  181 (190)
T 2fi1_A          138 PNPESMLYLREKYQIS--SGLVIGDRPIDIEAGQAAGLDTHLFTSI  181 (190)
T ss_dssp             TSCHHHHHHHHHTTCS--SEEEEESSHHHHHHHHHTTCEEEECSCH
T ss_pred             CCHHHHHHHHHHcCCC--eEEEEcCCHHHHHHHHHcCCeEEEECCC
Confidence            9999999999999998  9999999999999999999999999775

>2p9j_A Hypothetical protein AQ2171; secsg, riken, PSI, structural GENO protein structure initiative, southeast collaboratory for S genomics; 2.40A {Aquifex aeolicus}

Probab=99.54  E-value=6.5e-15  Score=116.23  Aligned_cols=115  Identities=16%  Similarity=0.139  Sum_probs=92.1

Q ss_pred             hhHHHHHhcCC---CCeEEEeCCChHHHHHHHHHcCCccccceeEeeccCCCCCCCCCCCCCcccccCCccccccCCCCH
Q 027403           59 PVLRNLLLSMP---QRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCKPSL  135 (224)
Q Consensus        59 ~g~~~~L~~l~---~~~~I~Tn~~~~~~~~~l~~lgl~~~fd~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~~  135 (224)
                      |+..++|+.|+   ++++|+||++...+...++++|+..+|+.                                +||++
T Consensus        39 ~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~~~~--------------------------------~kp~~   86 (162)
T 2p9j_A           39 VLDGIGIKLLQKMGITLAVISGRDSAPLITRLKELGVEEIYTG--------------------------------SYKKL   86 (162)
T ss_dssp             HHHHHHHHHHHTTTCEEEEEESCCCHHHHHHHHHTTCCEEEEC--------------------------------C--CH
T ss_pred             ccHHHHHHHHHHCCCEEEEEeCCCcHHHHHHHHHcCCHhhccC--------------------------------CCCCH
Confidence            45667777765   67899999999999999999999877753                                29999


Q ss_pred             HHHHHHHHHhCCCCCcEEEEeCChhcHHHHHHcCCeEEEECCCCC--CCCCceEeCCHhH---HHHHHHHHHhhcC
Q 027403          136 EAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP--VPPADHALNSIHN---IKEAIPEIWEGEG  206 (224)
Q Consensus       136 ~~~~~al~~~~~~~~~~l~VgDs~~Di~~A~~~G~~~v~v~~~~~--~~~~d~~i~~~~d---l~~~i~~~~~~~~  206 (224)
                      .+|..++++++++|++++||||+.+|+.+|+++|+.+++ .++..  ...+++++++..+   +.+++..++...|
T Consensus        87 ~~~~~~~~~~~~~~~~~~~vGD~~~Di~~a~~ag~~~~~-~~~~~~~~~~a~~v~~~~~~~g~~~~~~~~~~~~~~  161 (162)
T 2p9j_A           87 EIYEKIKEKYSLKDEEIGFIGDDVVDIEVMKKVGFPVAV-RNAVEEVRKVAVYITQRNGGEGALREVAELIHFLKN  161 (162)
T ss_dssp             HHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEEC-TTSCHHHHHHCSEECSSCSSSSHHHHHHHHHHHHC-
T ss_pred             HHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHCCCeEEe-cCccHHHHhhCCEEecCCCCCcHHHHHHHHHHHhcC
Confidence            999999999999999999999999999999999998664 34332  2348999999877   6677777766543

>2hx1_A Predicted sugar phosphatases of the HAD superfamily; ZP_00311070.1, possible sugar phosphatase, structural genomics; HET: MSE EPE; 2.10A {Cytophaga hutchinsonii}

Probab=99.53  E-value=4.9e-16  Score=133.33  Aligned_cols=113  Identities=19%  Similarity=0.151  Sum_probs=90.8

Q ss_pred             ChhHHHHHhcCCCCeEEEeCCChHHH--H--HHHHHcCCccccceeEeeccCCCCCCCCCCCCCcccccCCccccccCCC
Q 027403           58 DPVLRNLLLSMPQRKIIFTNADQKHA--M--EVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCKP  133 (224)
Q Consensus        58 ~~g~~~~L~~l~~~~~I~Tn~~~~~~--~--~~l~~lgl~~~fd~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP  133 (224)
                      ++++.+.|+.-..+ +|+||++....  .  ..++..|+..+|+.+++++++...                       ||
T Consensus       150 ~~~l~~~L~~~g~~-~i~tn~~~~~~~~~~~~~~~~~~l~~~f~~~~~~~~~~~~-----------------------KP  205 (284)
T 2hx1_A          150 LNKTVNLLRKRTIP-AIVANTDNTYPLTKTDVAIAIGGVATMIESILGRRFIRFG-----------------------KP  205 (284)
T ss_dssp             HHHHHHHHHHCCCC-EEEECCCSEEECSSSCEEECHHHHHHHHHHHHCSCEEEES-----------------------TT
T ss_pred             HHHHHHHHhcCCCe-EEEECCCccccCcCCCccccCChHHHHHHHHhCCceeEec-----------------------CC
Confidence            34444444444577 99999987655  2  223566788899999888877653                       99


Q ss_pred             CHHHHHHHHHHh----CCCCCcEEEEeCCh-hcHHHHHHcCCeEEEECCCCC-----C-------CCCceEeCCHhHH
Q 027403          134 SLEAIETAIRIA----NVDPKKTIFFDDSA-RNIASAKAAGLHTVIVGSSVP-----V-------PPADHALNSIHNI  194 (224)
Q Consensus       134 ~~~~~~~al~~~----~~~~~~~l~VgDs~-~Di~~A~~~G~~~v~v~~~~~-----~-------~~~d~~i~~~~dl  194 (224)
                      +|.+|..+++++    |++|++|+||||++ +||.+|+++|++++++.+|..     .       ..++++++++.+|
T Consensus       206 ~p~~~~~a~~~l~~~~~~~~~~~~~VGD~~~~Di~~A~~aG~~~i~v~~g~~~~~~l~~~~~~~~~~pd~~~~~l~el  283 (284)
T 2hx1_A          206 DSQMFMFAYDMLRQKMEISKREILMVGDTLHTDILGGNKFGLDTALVLTGNTRIDDAETKIKSTGIVPTHICESAVIE  283 (284)
T ss_dssp             SSHHHHHHHHHHHTTSCCCGGGEEEEESCTTTHHHHHHHHTCEEEEESSSSSCGGGHHHHHHHHTCCCSEEESCSCCC
T ss_pred             CHHHHHHHHHHHhhccCCCcceEEEECCCcHHHHHHHHHcCCeEEEECCCCCCHHHHHhhhhccCCCCCEEccchhhh
Confidence            999999999999    99999999999996 999999999999999998853     1       4688999888765

>1yv9_A Hydrolase, haloacid dehalogenase family; hypothetical protein, struc genomics, PSI, protein structure initiative; 2.80A {Enterococcus faecalis} SCOP: c.108.1.14

Probab=99.53  E-value=1e-15  Score=129.46  Aligned_cols=119  Identities=18%  Similarity=0.190  Sum_probs=94.6

Q ss_pred             CCCCChhHHHHHhcCC-CCeEEEeCCChHH--HHH-HHHHcCCccccceeEeeccCCCCCCCCCCCCCcccccCCccccc
Q 027403           54 KLKPDPVLRNLLLSMP-QRKIIFTNADQKH--AME-VLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRI  129 (224)
Q Consensus        54 ~~~~~~g~~~~L~~l~-~~~~I~Tn~~~~~--~~~-~l~~lgl~~~fd~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  129 (224)
                      ...++|++.++|+.|+ ...+|+||++...  ... .++..++..+|+.++++++...                      
T Consensus       124 ~~~~~~~~~~~l~~l~~g~~~i~tn~~~~~~~~~~~~~~~~~l~~~f~~~~~~~~~~~----------------------  181 (264)
T 1yv9_A          124 TELSYEKVVLATLAIQKGALFIGTNPDKNIPTERGLLPGAGSVVTFVETATQTKPVYI----------------------  181 (264)
T ss_dssp             TTCCHHHHHHHHHHHHTTCEEEESCCCSEEEETTEEEECHHHHHHHHHHHHTCCCEEC----------------------
T ss_pred             CCcCHHHHHHHHHHHhCCCEEEEECCCCcccCCCCcccCCcHHHHHHHHHhCCCcccc----------------------
Confidence            4568899999999886 2234899987742  111 2233346678888888777655                      


Q ss_pred             cCCCCHHHHHHHHHHhCCCCCcEEEEeCC-hhcHHHHHHcCCeEEEECCCCCC--------CCCceEeCCHhHHH
Q 027403          130 LCKPSLEAIETAIRIANVDPKKTIFFDDS-ARNIASAKAAGLHTVIVGSSVPV--------PPADHALNSIHNIK  195 (224)
Q Consensus       130 ~~KP~~~~~~~al~~~~~~~~~~l~VgDs-~~Di~~A~~~G~~~v~v~~~~~~--------~~~d~~i~~~~dl~  195 (224)
                       +||+|.+|..+++++|++|++|+||||+ .+|+.+|+++|+.+++|.+|...        ..+|++++++.++.
T Consensus       182 -~KP~p~~~~~~~~~~~~~~~~~~~vGD~~~~Di~~a~~aG~~~i~v~~g~~~~~~l~~~~~~~d~v~~~l~el~  255 (264)
T 1yv9_A          182 -GKPKAIIMERAIAHLGVEKEQVIMVGDNYETDIQSGIQNGIDSLLVTSGFTPKSAVPTLPTPPTYVVDSLDEWT  255 (264)
T ss_dssp             -STTSHHHHHHHHHHHCSCGGGEEEEESCTTTHHHHHHHHTCEEEEETTSSSCSSSTTTCSSCCSEEESSGGGCC
T ss_pred             -CCCCHHHHHHHHHHcCCCHHHEEEECCCcHHHHHHHHHcCCcEEEECCCCCCHHHHHhcCCCCCEEEecHHHHh
Confidence             3999999999999999999999999999 59999999999999999987531        16899999998864

>1zjj_A Hypothetical protein PH1952; alpha/beta hydrolase fold, HAD superfamily, structural genom riken structural genomics/proteomics initiative; 1.85A {Pyrococcus horikoshii}

Probab=99.52  E-value=6.7e-16  Score=131.42  Aligned_cols=121  Identities=18%  Similarity=0.136  Sum_probs=97.0

Q ss_pred             CCCCChhHHHHHhcCC-CCeEEEeCCChHHH--HHHHHH-cCCccccceeEeeccCCCCCCCCCCCCCcccccCCccccc
Q 027403           54 KLKPDPVLRNLLLSMP-QRKIIFTNADQKHA--MEVLGR-LGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRI  129 (224)
Q Consensus        54 ~~~~~~g~~~~L~~l~-~~~~I~Tn~~~~~~--~~~l~~-lgl~~~fd~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  129 (224)
                      ...++|++.++|+.|+ ...+|+||++....  ...+.. .++..+|+.+++++....                      
T Consensus       128 ~~~~~~~~~~~l~~L~~g~~~i~tn~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~----------------------  185 (263)
T 1zjj_A          128 PDLTYEKLKYATLAIRNGATFIGTNPDATLPGEEGIYPGAGSIIAALKVATNVEPIII----------------------  185 (263)
T ss_dssp             TTCBHHHHHHHHHHHHTTCEEEESCCCSEEEETTEEEECHHHHHHHHHHHHCCCCEEC----------------------
T ss_pred             CCCCHHHHHHHHHHHHCCCEEEEECCCccccCCCCCcCCcHHHHHHHHHHhCCCccEe----------------------
Confidence            4578999999998875 23349999987543  223333 456678888888877655                      


Q ss_pred             cCCCCHHHHHHHHHHhCCCCCcEEEEeCCh-hcHHHHHHcCCeEEEECCCCCC--------CCCceEeCCHhHHHHHHH
Q 027403          130 LCKPSLEAIETAIRIANVDPKKTIFFDDSA-RNIASAKAAGLHTVIVGSSVPV--------PPADHALNSIHNIKEAIP  199 (224)
Q Consensus       130 ~~KP~~~~~~~al~~~~~~~~~~l~VgDs~-~Di~~A~~~G~~~v~v~~~~~~--------~~~d~~i~~~~dl~~~i~  199 (224)
                       +||+|.+|+.++++  ++|++++||||++ +||.+|+++|+++++|.+|...        ..++++++++.++.+++.
T Consensus       186 -~KP~~~~~~~~~~~--~~~~~~~~VGD~~~~Di~~A~~aG~~~i~v~~g~~~~~~~~~~~~~p~~~~~~l~el~~~l~  261 (263)
T 1zjj_A          186 -GKPNEPMYEVVREM--FPGEELWMVGDRLDTDIAFAKKFGMKAIMVLTGVSSLEDIKKSEYKPDLVLPSVYELIDYLK  261 (263)
T ss_dssp             -STTSHHHHHHHHHH--STTCEEEEEESCTTTHHHHHHHTTCEEEEESSSSCCHHHHTTCSSCCSEEESSGGGGGGGGC
T ss_pred             -cCCCHHHHHHHHHh--CCcccEEEECCChHHHHHHHHHcCCeEEEECCCCCChHHHHhcCCCCCEEECCHHHHHHHHh
Confidence             39999999999999  9999999999996 9999999999999999987541        268999999999987654

>2oyc_A PLP phosphatase, pyridoxal phosphate phosphatase; structural genomics, NYSGXRC, NEW YORK SGX research center for structural genomics, PSI-2; 1.72A {Homo sapiens} PDB: 2p27_A 2p69_A* 2cft_A* 2cfs_A 2cfr_A*

Probab=99.49  E-value=1.5e-15  Score=132.17  Aligned_cols=122  Identities=20%  Similarity=0.198  Sum_probs=99.2

Q ss_pred             CCCCChhHHHHHhcCC--CCeEEEeCCChHHH--H-HHHHHcC-CccccceeEeeccCCCCCCCCCCCCCcccccCCccc
Q 027403           54 KLKPDPVLRNLLLSMP--QRKIIFTNADQKHA--M-EVLGRLG-LEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQ  127 (224)
Q Consensus        54 ~~~~~~g~~~~L~~l~--~~~~I~Tn~~~~~~--~-~~l~~lg-l~~~fd~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~  127 (224)
                      ...++|++.++|+.++  ..++|+||.+....  . ..+..+| +..+|+.+++++.+..                    
T Consensus       154 ~~~~~~~~~~~l~~l~~~g~~~i~tn~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~--------------------  213 (306)
T 2oyc_A          154 EHFSFAKLREACAHLRDPECLLVATDRDPWHPLSDGSRTPGTGSLAAAVETASGRQALVV--------------------  213 (306)
T ss_dssp             TTCCHHHHHHHHHHHTSTTSEEEESCCCCEEECTTSCEEECHHHHHHHHHHHHTCCCEEC--------------------
T ss_pred             CCCCHHHHHHHHHHHHcCCCEEEEEcCCccccCCCCCcCCCCcHHHHHHHHHhCCCceee--------------------
Confidence            4567899999999886  34889999886543  1 2334445 6678888887777665                    


Q ss_pred             cccCCCCHHHHHHHHHHhCCCCCcEEEEeCCh-hcHHHHHHcCCeEEEECCCCCC--------------CCCceEeCCHh
Q 027403          128 RILCKPSLEAIETAIRIANVDPKKTIFFDDSA-RNIASAKAAGLHTVIVGSSVPV--------------PPADHALNSIH  192 (224)
Q Consensus       128 ~~~~KP~~~~~~~al~~~~~~~~~~l~VgDs~-~Di~~A~~~G~~~v~v~~~~~~--------------~~~d~~i~~~~  192 (224)
                         +||+|.+|..+++++|++|++|++|||+. +||.+|+++|+.+++|.+|...              ..++++++++.
T Consensus       214 ---~KP~~~~~~~~~~~lgi~~~e~l~vGD~~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~~~~~~~~~pd~vi~~l~  290 (306)
T 2oyc_A          214 ---GKPSPYMFECITENFSIDPARTLMVGDRLETDILFGHRCGMTTVLTLTGVSRLEEAQAYLAAGQHDLVPHYYVESIA  290 (306)
T ss_dssp             ---STTSTHHHHHHHHHSCCCGGGEEEEESCTTTHHHHHHHHTCEEEEESSSSCCHHHHHHHHHTTCGGGSCSEEESSGG
T ss_pred             ---CCCCHHHHHHHHHHcCCChHHEEEECCCchHHHHHHHHCCCeEEEECCCCCCHHHHHhhhcccccCCCCCEEECCHH
Confidence               39999999999999999999999999996 9999999999999999988541              36899999999


Q ss_pred             HHHHHH
Q 027403          193 NIKEAI  198 (224)
Q Consensus       193 dl~~~i  198 (224)
                      +|.+++
T Consensus       291 el~~~l  296 (306)
T 2oyc_A          291 DLTEGL  296 (306)
T ss_dssp             GGGGGC
T ss_pred             HHHHHH
Confidence            986543

>4eze_A Haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 2.27A {Salmonella enterica subsp}

Probab=99.49  E-value=9.3e-15  Score=129.31  Aligned_cols=129  Identities=12%  Similarity=0.108  Sum_probs=98.8

Q ss_pred             CCCChhHHHHHhcCC---CCeEEEeCCChHHHHHHHHHcCCccccceeEeeccCCCCCCCCCCCCCcccccCCccccccC
Q 027403           55 LKPDPVLRNLLLSMP---QRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILC  131 (224)
Q Consensus        55 ~~~~~g~~~~L~~l~---~~~~I~Tn~~~~~~~~~l~~lgl~~~fd~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  131 (224)
                      +.++||+.++|+.|+   ++++|+||++...+...++++|+..+|+.+++.++....             +..+.....+
T Consensus       178 ~~l~pg~~e~L~~Lk~~G~~v~IvSn~~~~~~~~~l~~lgl~~~f~~~l~~~dg~~t-------------g~i~~~~~~~  244 (317)
T 4eze_A          178 MTLSPGLLTILPVIKAKGFKTAIISGGLDIFTQRLKARYQLDYAFSNTVEIRDNVLT-------------DNITLPIMNA  244 (317)
T ss_dssp             CCBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCSEEEEECEEEETTEEE-------------EEECSSCCCH
T ss_pred             CEECcCHHHHHHHHHhCCCEEEEEeCccHHHHHHHHHHcCCCeEEEEEEEeeCCeee-------------eeEecccCCC
Confidence            679999999999986   789999999999999999999999999987765442100             0000111124


Q ss_pred             CCCHHHHHHHHHHhCCCCCcEEEEeCChhcHHHHHHcCCeEEEECCCCC--CCCCceE--eCCHhHHHHHH
Q 027403          132 KPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP--VPPADHA--LNSIHNIKEAI  198 (224)
Q Consensus       132 KP~~~~~~~al~~~~~~~~~~l~VgDs~~Di~~A~~~G~~~v~v~~~~~--~~~~d~~--i~~~~dl~~~i  198 (224)
                      ||++.+|..+++++|++|++|++|||+.+|+.+|+++|+.+++ . +..  ...++++  .+++.++..++
T Consensus       245 kpkp~~~~~~~~~lgv~~~~~i~VGDs~~Di~aa~~AG~~va~-~-~~~~~~~~a~~~i~~~~L~~ll~~L  313 (317)
T 4eze_A          245 ANKKQTLVDLAARLNIATENIIACGDGANDLPMLEHAGTGIAW-K-AKPVVREKIHHQINYHGFELLLFLI  313 (317)
T ss_dssp             HHHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEEE-S-CCHHHHHHCCEEESSSCGGGGGGGT
T ss_pred             CCCHHHHHHHHHHcCCCcceEEEEeCCHHHHHHHHHCCCeEEe-C-CCHHHHHhcCeeeCCCCHHHHHHHH
Confidence            9999999999999999999999999999999999999998777 3 221  2234444  44677666544

>1vjr_A 4-nitrophenylphosphatase; TM1742, structural genomics, JCSG, protein structure initiative, joint center for structural G hydrolase; 2.40A {Thermotoga maritima} SCOP: c.108.1.14 PDB: 1pw5_A*

Probab=99.48  E-value=5.1e-15  Score=125.41  Aligned_cols=121  Identities=13%  Similarity=0.160  Sum_probs=94.7

Q ss_pred             CCCChhHHHHHhcCC-CCeEEEeCCChHHHHH---HHHHcCCccccceeEeecc-CCCCCCCCCCCCCcccccCCccccc
Q 027403           55 LKPDPVLRNLLLSMP-QRKIIFTNADQKHAME---VLGRLGLEDCFEGIICFET-INPRLQPADNTDGIENNSFSSNQRI  129 (224)
Q Consensus        55 ~~~~~g~~~~L~~l~-~~~~I~Tn~~~~~~~~---~l~~lgl~~~fd~ii~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~  129 (224)
                      ..+++++.++|+.+. ...+++||.+......   .++..++..+|+.+++++. +..                      
T Consensus       136 ~~~~~~~~~~l~~l~~~~~~i~tn~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~----------------------  193 (271)
T 1vjr_A          136 TLTYERLKKACILLRKGKFYIATHPDINCPSKEGPVPDAGSIMAAIEASTGRKPDLIA----------------------  193 (271)
T ss_dssp             TCCHHHHHHHHHHHTTTCEEEESCCCSEECCTTSCEECHHHHHHHHHHHHSCCCSEEC----------------------
T ss_pred             CcCHHHHHHHHHHHHCCCeEEEECCCccccCCCCccccccHHHHHHHHHhCCCCcccC----------------------
Confidence            457789988888774 2234889987542211   2233345667887777776 655                      


Q ss_pred             cCCCCHHHHHHHHHHhCCCCCcEEEEeCCh-hcHHHHHHcCCeEEEECCCCCC--------CCCceEeCCHhHHHHHH
Q 027403          130 LCKPSLEAIETAIRIANVDPKKTIFFDDSA-RNIASAKAAGLHTVIVGSSVPV--------PPADHALNSIHNIKEAI  198 (224)
Q Consensus       130 ~~KP~~~~~~~al~~~~~~~~~~l~VgDs~-~Di~~A~~~G~~~v~v~~~~~~--------~~~d~~i~~~~dl~~~i  198 (224)
                       +||++.+|..+++++|++|++|++|||+. +|+.+|+++|+.++++.+|...        ..++++++++.++.+++
T Consensus       194 -~kpk~~~~~~~~~~lgi~~~e~i~iGD~~~nDi~~a~~aG~~~i~v~~g~~~~~~~~~~~~~~~~~i~~l~el~~~l  270 (271)
T 1vjr_A          194 -GKPNPLVVDVISEKFGVPKERMAMVGDRLYTDVKLGKNAGIVSILVLTGETTPEDLERAETKPDFVFKNLGELAKAV  270 (271)
T ss_dssp             -STTSTHHHHHHHHHHTCCGGGEEEEESCHHHHHHHHHHHTCEEEEESSSSCCHHHHHHCSSCCSEEESSHHHHHHHH
T ss_pred             -CCCCHHHHHHHHHHhCCCCceEEEECCCcHHHHHHHHHcCCeEEEECCCCCCHHHHhhcCCCCCEEECCHHHHHHHh
Confidence             49999999999999999999999999995 9999999999999999998642        37899999999998765

>3e8m_A Acylneuraminate cytidylyltransferase; 2-keto-3-deoxynononic acid 9-phosphate phosphohydrolase, nucleotidyltransferase; HET: PEG PG4 EDO PGE; 1.10A {Bacteroides thetaiotaomicron} PDB: 3e84_A 3e81_A*

Probab=99.45  E-value=1e-13  Score=109.55  Aligned_cols=108  Identities=14%  Similarity=0.091  Sum_probs=86.4

Q ss_pred             HHHHhcCCCCeEEEeCCChHHHHHHHHHcCCccccceeEeeccCCCCCCCCCCCCCcccccCCccccccCCCCHHHHHHH
Q 027403           62 RNLLLSMPQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCKPSLEAIETA  141 (224)
Q Consensus        62 ~~~L~~l~~~~~I~Tn~~~~~~~~~l~~lgl~~~fd~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~~~~~~~a  141 (224)
                      .+.|+..+++++|+||++...+...++++|+..+|+.                                .||++.++..+
T Consensus        40 l~~l~~~g~~~~i~T~~~~~~~~~~~~~~gl~~~~~~--------------------------------~kpk~~~~~~~   87 (164)
T 3e8m_A           40 IFWAHNKGIPVGILTGEKTEIVRRRAEKLKVDYLFQG--------------------------------VVDKLSAAEEL   87 (164)
T ss_dssp             HHHHHHTTCCEEEECSSCCHHHHHHHHHTTCSEEECS--------------------------------CSCHHHHHHHH
T ss_pred             HHHHHHCCCEEEEEeCCChHHHHHHHHHcCCCEeecc--------------------------------cCChHHHHHHH
Confidence            4556666689999999999999999999999877764                                29999999999


Q ss_pred             HHHhCCCCCcEEEEeCChhcHHHHHHcCCeEEEECCCCC--CCCCceEeCCHh---HHHHHHHHHH
Q 027403          142 IRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP--VPPADHALNSIH---NIKEAIPEIW  202 (224)
Q Consensus       142 l~~~~~~~~~~l~VgDs~~Di~~A~~~G~~~v~v~~~~~--~~~~d~~i~~~~---dl~~~i~~~~  202 (224)
                      +++++++|++|+||||+.+|+.+|+++|+.++.. ++..  ...+++++.+-.   .+.+++..++
T Consensus        88 ~~~~~~~~~~~~~vGD~~~Di~~~~~ag~~~~~~-~~~~~~~~~ad~v~~~~~~~g~~~e~~~~ll  152 (164)
T 3e8m_A           88 CNELGINLEQVAYIGDDLNDAKLLKRVGIAGVPA-SAPFYIRRLSTIFLEKRGGEGVFREFVEKVL  152 (164)
T ss_dssp             HHHHTCCGGGEEEECCSGGGHHHHTTSSEEECCT-TSCHHHHTTCSSCCCCCTTTTHHHHHHHHHT
T ss_pred             HHHcCCCHHHEEEECCCHHHHHHHHHCCCeEEcC-ChHHHHHHhCcEEeccCCCCcHHHHHHHHHH
Confidence            9999999999999999999999999999976543 3322  445788887721   1445555554

>4ap9_A Phosphoserine phosphatase; hydrolase, haloacid dehalogenase superfamily, NDSB; HET: 1PS; 1.78A {Thermococcus onnurineus} PDB: 4b6j_A

Probab=99.44  E-value=3.7e-14  Score=113.12  Aligned_cols=120  Identities=13%  Similarity=0.157  Sum_probs=97.1

Q ss_pred             CCCCChhHHHHHhcCC---CCeEEEeCCChHHHHHHHHHcCCccccceeEeeccCCCCCCCCCCCCCcccccCCcccccc
Q 027403           54 KLKPDPVLRNLLLSMP---QRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRIL  130 (224)
Q Consensus        54 ~~~~~~g~~~~L~~l~---~~~~I~Tn~~~~~~~~~l~~lgl~~~fd~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  130 (224)
                      .+.++|++.++|+.++   ++++|+||++...+... +.+|+..+|+.+++.+.....                      
T Consensus        77 ~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~----------------------  133 (201)
T 4ap9_A           77 KVNVSPEARELVETLREKGFKVVLISGSFEEVLEPF-KELGDEFMANRAIFEDGKFQG----------------------  133 (201)
T ss_dssp             GCCCCHHHHHHHHHHHHTTCEEEEEEEEETTTSGGG-TTTSSEEEEEEEEEETTEEEE----------------------
T ss_pred             hCCCChhHHHHHHHHHHCCCeEEEEeCCcHHHHHHH-HHcCchhheeeEEeeCCceEC----------------------
Confidence            3689999999999996   67889999998888888 999998886666655533210                      


Q ss_pred             CCCCHHHHHHHHHHhCCCCCcEEEEeCChhcHHHHHHcCCeEEEECCCCCCCCCceEeCCHhHHHHHHHHH
Q 027403          131 CKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVPVPPADHALNSIHNIKEAIPEI  201 (224)
Q Consensus       131 ~KP~~~~~~~al~~~~~~~~~~l~VgDs~~Di~~A~~~G~~~v~v~~~~~~~~~d~~i~~~~dl~~~i~~~  201 (224)
                      .+|.+.....+++++  +|++|++|||+.+|+.+|+++|+. +++.++..  .++++++|+.++.++|.++
T Consensus       134 ~~~~~~~k~~~l~~l--~~~~~i~iGD~~~Di~~~~~ag~~-v~~~~~~~--~ad~v~~~~~el~~~l~~l  199 (201)
T 4ap9_A          134 IRLRFRDKGEFLKRF--RDGFILAMGDGYADAKMFERADMG-IAVGREIP--GADLLVKDLKELVDFIKNL  199 (201)
T ss_dssp             EECCSSCHHHHHGGG--TTSCEEEEECTTCCHHHHHHCSEE-EEESSCCT--TCSEEESSHHHHHHHHHTC
T ss_pred             CcCCccCHHHHHHhc--CcCcEEEEeCCHHHHHHHHhCCce-EEECCCCc--cccEEEccHHHHHHHHHHh
Confidence            266665566777777  899999999999999999999997 67766654  8999999999999888765

>3kd3_A Phosphoserine phosphohydrolase-like protein; csgid, niaid, S genomics, national institute of allergy and infectious DISE (niaid); 1.70A {Francisella tularensis subsp}

Probab=99.44  E-value=4.3e-13  Score=107.83  Aligned_cols=125  Identities=10%  Similarity=0.030  Sum_probs=94.0

Q ss_pred             CCCChhHHHHHhcCC---CCeEEEeCCChHHHHHHHHHcCCc--cccce-eEeeccCCCCCCCCCCCCCcccccCCcccc
Q 027403           55 LKPDPVLRNLLLSMP---QRKIIFTNADQKHAMEVLGRLGLE--DCFEG-IICFETINPRLQPADNTDGIENNSFSSNQR  128 (224)
Q Consensus        55 ~~~~~g~~~~L~~l~---~~~~I~Tn~~~~~~~~~l~~lgl~--~~fd~-ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~  128 (224)
                      ..++||+.++|+.++   .+++|+||++...+...++++|+.  .+|.. ++.+.+...                .  ..
T Consensus        81 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------~--~~  142 (219)
T 3kd3_A           81 NLLTDGIKELVQDLKNKGFEIWIFSGGLSESIQPFADYLNIPRENIFAVETIWNSDGSF----------------K--EL  142 (219)
T ss_dssp             TTBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCCGGGEEEEEEEECTTSBE----------------E--EE
T ss_pred             ccCChhHHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHcCCCcccEEEeeeeecCCCce----------------e--cc
Confidence            458899999999986   688999999999999999999984  45653 222222110                0  01


Q ss_pred             ccCCCCHHHHHHHHHH-hCCCCCcEEEEeCChhcHHHHHHcCCeEEEECCCCC------CCCCceEeCCHhHHHHHH
Q 027403          129 ILCKPSLEAIETAIRI-ANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP------VPPADHALNSIHNIKEAI  198 (224)
Q Consensus       129 ~~~KP~~~~~~~al~~-~~~~~~~~l~VgDs~~Di~~A~~~G~~~v~v~~~~~------~~~~d~~i~~~~dl~~~i  198 (224)
                      ...||++..+..++.+ +|++|++|++|||+.+|+.+| ++|+.++++..+..      ...++++++++.+|.++|
T Consensus       143 ~~~~~~~~~~~~~l~~~~~~~~~~~~~vGD~~~Di~~~-~~G~~~~~v~~~~~~~~~~~~~~ad~v~~~~~el~~~l  218 (219)
T 3kd3_A          143 DNSNGACDSKLSAFDKAKGLIDGEVIAIGDGYTDYQLY-EKGYATKFIAYMEHIEREKVINLSKYVARNVAELASLI  218 (219)
T ss_dssp             ECTTSTTTCHHHHHHHHGGGCCSEEEEEESSHHHHHHH-HHTSCSEEEEECSSCCCHHHHHHCSEEESSHHHHHHHH
T ss_pred             CCCCCCcccHHHHHHHHhCCCCCCEEEEECCHhHHHHH-hCCCCcEEEeccCccccHHHHhhcceeeCCHHHHHHhh
Confidence            1248887766666555 599999999999999999998 68999888876543      234899999999998865

>3n28_A Phosphoserine phosphatase; HAD family hydrolase, structural genomics, PSI, protein STRU initiative, nysgrc; 2.30A {Vibrio cholerae}

Probab=99.42  E-value=2.7e-13  Score=119.46  Aligned_cols=138  Identities=14%  Similarity=0.124  Sum_probs=104.0

Q ss_pred             CCCCChhHHHHHhcCC---CCeEEEeCCChHHHHHHHHHcCCccccceeEeeccCCCCCCCCCCCCCcccccCCcccccc
Q 027403           54 KLKPDPVLRNLLLSMP---QRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRIL  130 (224)
Q Consensus        54 ~~~~~~g~~~~L~~l~---~~~~I~Tn~~~~~~~~~l~~lgl~~~fd~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  130 (224)
                      .++++||+.++|+.|+   ++++|+||++...+...++++|+..+|+..+...+....             ...+.....
T Consensus       176 ~~~~~pg~~~~l~~L~~~g~~~~ivS~~~~~~~~~~~~~lgl~~~~~~~l~~~d~~~t-------------g~~~~~~~~  242 (335)
T 3n28_A          176 TLPLMPELPELVATLHAFGWKVAIASGGFTYFSDYLKEQLSLDYAQSNTLEIVSGKLT-------------GQVLGEVVS  242 (335)
T ss_dssp             TCCCCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCSEEEEEEEEEETTEEE-------------EEEESCCCC
T ss_pred             hCCcCcCHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHcCCCeEEeeeeEeeCCeee-------------eeecccccC
Confidence            4678999999999986   789999999999999999999998888765432211000             000000111


Q ss_pred             CCCCHHHHHHHHHHhCCCCCcEEEEeCChhcHHHHHHcCCeEEEECCCCC--CCCCceE--eCCHhHHHHHHHHHHhhcC
Q 027403          131 CKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP--VPPADHA--LNSIHNIKEAIPEIWEGEG  206 (224)
Q Consensus       131 ~KP~~~~~~~al~~~~~~~~~~l~VgDs~~Di~~A~~~G~~~v~v~~~~~--~~~~d~~--i~~~~dl~~~i~~~~~~~~  206 (224)
                      +||++.+|..+++++|++|++|++|||+.+|+.+|+++|+.+++  .+.+  ...++++  .+++.++..+|...+....
T Consensus       243 ~kpk~~~~~~~~~~lgi~~~~~v~vGDs~nDi~~a~~aG~~va~--~~~~~~~~~a~~v~~~~~l~~v~~~L~~~l~~~~  320 (335)
T 3n28_A          243 AQTKADILLTLAQQYDVEIHNTVAVGDGANDLVMMAAAGLGVAY--HAKPKVEAKAQTAVRFAGLGGVVCILSAALVAQQ  320 (335)
T ss_dssp             HHHHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEEE--SCCHHHHTTSSEEESSSCTHHHHHHHHHHHHHTT
T ss_pred             hhhhHHHHHHHHHHcCCChhhEEEEeCCHHHHHHHHHCCCeEEe--CCCHHHHhhCCEEEecCCHHHHHHHHHhHHHHhh
Confidence            49999999999999999999999999999999999999998776  3322  3445554  5678888888888776544

>1ltq_A Polynucleotide kinase; phosphatase, alpha/beta, P-loop, transferase; HET: ADP; 2.33A {Enterobacteria phage T4} SCOP: c.108.1.9 c.37.1.1 PDB: 1rc8_A* 1rpz_A* 1rrc_A* 2ia5_A

Probab=99.42  E-value=3.5e-13  Score=116.68  Aligned_cols=97  Identities=10%  Similarity=0.040  Sum_probs=83.2

Q ss_pred             CCChhHHHHHhcCC---CCeEEEeCCChH---HHHHHHHH--------cCCccccceeEeeccCCCCCCCCCCCCCcccc
Q 027403           56 KPDPVLRNLLLSMP---QRKIIFTNADQK---HAMEVLGR--------LGLEDCFEGIICFETINPRLQPADNTDGIENN  121 (224)
Q Consensus        56 ~~~~g~~~~L~~l~---~~~~I~Tn~~~~---~~~~~l~~--------lgl~~~fd~ii~~~~~~~~~~~~~~~~~~~~~  121 (224)
                      .++||+.++|+.|+   ++++|+||++..   .+...|++        +|+  +|+.+++.++..               
T Consensus       188 ~~~~g~~e~L~~L~~~g~~~~v~T~k~~~~~~~~~~~l~~~~~~~~~~~~~--~~~~~~~~~~~~---------------  250 (301)
T 1ltq_A          188 VINPMVVELSKMYALMGYQIVVVSGRESGTKEDPTKYYRMTRKWVEDIAGV--PLVMQCQREQGD---------------  250 (301)
T ss_dssp             CBCHHHHHHHHHHHHTTCEEEEEECSCCCCSSSTTHHHHHHHHHHHHTTCC--CCSEEEECCTTC---------------
T ss_pred             CCChHHHHHHHHHHHCCCeEEEEeCCCcccchhHHHHHHhcccccccccCC--CchheeeccCCC---------------
Confidence            46999999999996   679999999854   34667777        899  589888877653               


Q ss_pred             cCCccccccCCCCHHHHHHHHHHhCCCCCc-EEEEeCChhcHHHHHHcCCeEEEECCC
Q 027403          122 SFSSNQRILCKPSLEAIETAIRIANVDPKK-TIFFDDSARNIASAKAAGLHTVIVGSS  178 (224)
Q Consensus       122 ~~~~~~~~~~KP~~~~~~~al~~~~~~~~~-~l~VgDs~~Di~~A~~~G~~~v~v~~~  178 (224)
                               .||+|.++..++++++.++.+ +++|||+..|+.+|+++|+++++|.||
T Consensus       251 ---------~kp~p~~~~~~~~~~~~~~~~~~~~vgD~~~di~~a~~aG~~~~~v~~G  299 (301)
T 1ltq_A          251 ---------TRKDDVVKEEIFWKHIAPHFDVKLAIDDRTQVVEMWRRIGVECWQVASG  299 (301)
T ss_dssp             ---------CSCHHHHHHHHHHHHTTTTCEEEEEEECCHHHHHHHHHTTCCEEECSCC
T ss_pred             ---------CcHHHHHHHHHHHHHhccccceEEEeCCcHHHHHHHHHcCCeEEEecCC
Confidence                     299999999999999887655 799999999999999999999999987

>2r8e_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; YRBI, divalent metal, HAD superfamily, KDO 8-P, hydrolase; 1.40A {Escherichia coli O6} PDB: 2r8x_A 2r8y_A 2r8z_A 3hyc_A 3i6b_A*

Probab=99.40  E-value=1e-12  Score=106.88  Aligned_cols=118  Identities=17%  Similarity=0.274  Sum_probs=89.9

Q ss_pred             HHHHhcCCCCeEEEeCCChHHHHHHHHHcCCccccceeEeeccCCCCCCCCCCCCCcccccCCccccccCCCCHHHHHHH
Q 027403           62 RNLLLSMPQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCKPSLEAIETA  141 (224)
Q Consensus        62 ~~~L~~l~~~~~I~Tn~~~~~~~~~l~~lgl~~~fd~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~~~~~~~a  141 (224)
                      .+.|+..+++++|+||++...+...++++|+..+|+.                                +||++.++..+
T Consensus        62 l~~L~~~g~~v~ivT~~~~~~~~~~l~~lgl~~~~~~--------------------------------~kpk~~~~~~~  109 (188)
T 2r8e_A           62 IRCALTSDIEVAIITGRKAKLVEDRCATLGITHLYQG--------------------------------QSNKLIAFSDL  109 (188)
T ss_dssp             HHHHHTTTCEEEEECSSCCHHHHHHHHHHTCCEEECS--------------------------------CSCSHHHHHHH
T ss_pred             HHHHHHCCCeEEEEeCCChHHHHHHHHHcCCceeecC--------------------------------CCCCHHHHHHH
Confidence            4445555588999999999999999999998877643                                39999999999


Q ss_pred             HHHhCCCCCcEEEEeCChhcHHHHHHcCCeEEEECCCCC--CCCCceEeCCH---hHHHHHHHHHHhhcCcchhhhh
Q 027403          142 IRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP--VPPADHALNSI---HNIKEAIPEIWEGEGEQLEQVI  213 (224)
Q Consensus       142 l~~~~~~~~~~l~VgDs~~Di~~A~~~G~~~v~v~~~~~--~~~~d~~i~~~---~dl~~~i~~~~~~~~~~~~~~~  213 (224)
                      ++++|++|++|+||||+.+|+.+|+++|+.+++. ++..  ...+++++++.   .-+.+++..++...+. .+.++
T Consensus       110 ~~~~g~~~~~~~~iGD~~~Di~~a~~ag~~~~~~-~~~~~~~~~ad~v~~~~~~~g~~~~~l~~ll~~~~~-~~~~~  184 (188)
T 2r8e_A          110 LEKLAIAPENVAYVGDDLIDWPVMEKVGLSVAVA-DAHPLLIPRADYVTRIAGGRGAVREVCDLLLLAQGK-LDEAK  184 (188)
T ss_dssp             HHHHTCCGGGEEEEESSGGGHHHHTTSSEEEECT-TSCTTTGGGSSEECSSCTTTTHHHHHHHHHHHHTTC-C----
T ss_pred             HHHcCCCHHHEEEECCCHHHHHHHHHCCCEEEec-CcCHHHHhcCCEEEeCCCCCcHHHHHHHHHHHhcCc-HHHHH
Confidence            9999999999999999999999999999987543 3332  34589999886   2234666666665554 44433

>3p96_A Phosphoserine phosphatase SERB; ssgcid, structural genomics, structural genomics center for infectious disease, hydrolas; 2.05A {Mycobacterium avium}

Probab=99.39  E-value=3.2e-13  Score=122.73  Aligned_cols=129  Identities=18%  Similarity=0.112  Sum_probs=96.6

Q ss_pred             CCCChhHHHHHhcCC---CCeEEEeCCChHHHHHHHHHcCCccccceeEeeccCCCCCCCCCCCCCcccccCCccccccC
Q 027403           55 LKPDPVLRNLLLSMP---QRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILC  131 (224)
Q Consensus        55 ~~~~~g~~~~L~~l~---~~~~I~Tn~~~~~~~~~l~~lgl~~~fd~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  131 (224)
                      +.++||+.++|+.|+   ++++|+||++...+...++++|+..+|+..+...+...        .+    . .......+
T Consensus       255 ~~~~pg~~e~l~~Lk~~G~~~~ivS~~~~~~~~~~~~~lgl~~~~~~~l~~~dg~~--------tg----~-~~~~v~~~  321 (415)
T 3p96_A          255 LELMPGARTTLRTLRRLGYACGVVSGGFRRIIEPLAEELMLDYVAANELEIVDGTL--------TG----R-VVGPIIDR  321 (415)
T ss_dssp             CCBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCSEEEEECEEEETTEE--------EE----E-ECSSCCCH
T ss_pred             CccCccHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHcCccceeeeeEEEeCCEE--------Ee----e-EccCCCCC
Confidence            589999999999996   78899999999999999999999888775432221100        00    0 00001114


Q ss_pred             CCCHHHHHHHHHHhCCCCCcEEEEeCChhcHHHHHHcCCeEEEECCCCC--CCCCceEeC--CHhHHHHHH
Q 027403          132 KPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP--VPPADHALN--SIHNIKEAI  198 (224)
Q Consensus       132 KP~~~~~~~al~~~~~~~~~~l~VgDs~~Di~~A~~~G~~~v~v~~~~~--~~~~d~~i~--~~~dl~~~i  198 (224)
                      ||++.+|..+++++|++|++|++|||+.+|+.+|+++|+.+++  .+.+  ...++++++  ++.++..++
T Consensus       322 kpk~~~~~~~~~~~gi~~~~~i~vGD~~~Di~~a~~aG~~va~--~~~~~~~~~ad~~i~~~~l~~ll~~l  390 (415)
T 3p96_A          322 AGKATALREFAQRAGVPMAQTVAVGDGANDIDMLAAAGLGIAF--NAKPALREVADASLSHPYLDTVLFLL  390 (415)
T ss_dssp             HHHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEEE--SCCHHHHHHCSEEECSSCTTHHHHHT
T ss_pred             cchHHHHHHHHHHcCcChhhEEEEECCHHHHHHHHHCCCeEEE--CCCHHHHHhCCEEEccCCHHHHHHHh
Confidence            9999999999999999999999999999999999999998776  2222  344677754  566666554

>2c4n_A Protein NAGD; nucleotide phosphatase, HAD superfamily, UMP phosphatase, carbohydrate metabolism, hydrolase; 1.8A {Escherichia coli} SCOP: c.108.1.14

Probab=99.38  E-value=1.7e-14  Score=118.42  Aligned_cols=65  Identities=26%  Similarity=0.308  Sum_probs=59.1

Q ss_pred             CCCCHHHHHHHHHHhCCCCCcEEEEeCC-hhcHHHHHHcCCeEEEECCCCCC--------CCCceEeCCHhHHH
Q 027403          131 CKPSLEAIETAIRIANVDPKKTIFFDDS-ARNIASAKAAGLHTVIVGSSVPV--------PPADHALNSIHNIK  195 (224)
Q Consensus       131 ~KP~~~~~~~al~~~~~~~~~~l~VgDs-~~Di~~A~~~G~~~v~v~~~~~~--------~~~d~~i~~~~dl~  195 (224)
                      +||++.+|..+++++|++|++|++|||+ .+|+.+|+++|+.+++|.+|...        ..++++++++.+|.
T Consensus       175 ~kpk~~~~~~~~~~lgi~~~~~i~iGD~~~nDi~~~~~aG~~~~~v~~g~~~~~~~~~~~~~~~~v~~~~~el~  248 (250)
T 2c4n_A          175 GKPSPWIIRAALNKMQAHSEETVIVGDNLRTDILAGFQAGLETILVLSGVSSLDDIDSMPFRPSWIYPSVAEID  248 (250)
T ss_dssp             STTSTHHHHHHHHHHTCCGGGEEEEESCTTTHHHHHHHTTCEEEEESSSSCCGGGGSSCSSCCSEEESSGGGCC
T ss_pred             CCCCHHHHHHHHHHcCCCcceEEEECCCchhHHHHHHHcCCeEEEECCCCCChhhhhhcCCCCCEEECCHHHhh
Confidence            4999999999999999999999999999 69999999999999999987531        46899999998874

>1l7m_A Phosphoserine phosphatase; rossmann fold, four-helix bundle, B-hairpin, structural genomics, BSGC structure funded by NIH; 1.48A {Methanocaldococcus jannaschii} SCOP: c.108.1.4 PDB: 1f5s_A 1l7n_A 1l7p_A* 1l7o_A* 1j97_A*

Probab=99.37  E-value=3.1e-13  Score=108.51  Aligned_cols=128  Identities=16%  Similarity=0.227  Sum_probs=94.1

Q ss_pred             CCCChhHHHHHhcCC---CCeEEEeCCChHHHHHHHHHcCCccccceeEeeccCCCCCCCCCCCCCcccccCCccccccC
Q 027403           55 LKPDPVLRNLLLSMP---QRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILC  131 (224)
Q Consensus        55 ~~~~~g~~~~L~~l~---~~~~I~Tn~~~~~~~~~l~~lgl~~~fd~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  131 (224)
                      ..+.|++.++|+.++   .+++|+||++...+...++.+|+..+|+.++...+...            ..... .....+
T Consensus        75 ~~l~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~-~~~~~~  141 (211)
T 1l7m_A           75 ITPTEGAEETIKELKNRGYVVAVVSGGFDIAVNKIKEKLGLDYAFANRLIVKDGKL------------TGDVE-GEVLKE  141 (211)
T ss_dssp             CCBCTTHHHHHHHHHHTTEEEEEEEEEEHHHHHHHHHHHTCSEEEEEEEEEETTEE------------EEEEE-CSSCST
T ss_pred             CCCCccHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHcCCCeEEEeeeEEECCEE------------cCCcc-cCccCC
Confidence            456789999999886   56789999998888888999999877766443322000            00000 000113


Q ss_pred             CCCHHHHHHHHHHhCCCCCcEEEEeCChhcHHHHHHcCCeEEEECCCCC--CCCCceEeCC--HhHHHHH
Q 027403          132 KPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP--VPPADHALNS--IHNIKEA  197 (224)
Q Consensus       132 KP~~~~~~~al~~~~~~~~~~l~VgDs~~Di~~A~~~G~~~v~v~~~~~--~~~~d~~i~~--~~dl~~~  197 (224)
                      ++++..+..+++++|++|++|++|||+.+|+.+|+++|+. +++. +..  ...+++++.+  +.+|.++
T Consensus       142 ~~K~~~l~~~~~~lgi~~~~~~~iGD~~~Di~~~~~ag~~-~~~~-~~~~~~~~a~~v~~~~~~~~l~~~  209 (211)
T 1l7m_A          142 NAKGEILEKIAKIEGINLEDTVAVGDGANDISMFKKAGLK-IAFC-AKPILKEKADICIEKRDLREILKY  209 (211)
T ss_dssp             THHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHCSEE-EEES-CCHHHHTTCSEEECSSCGGGGGGG
T ss_pred             ccHHHHHHHHHHHcCCCHHHEEEEecChhHHHHHHHCCCE-EEEC-CCHHHHhhcceeecchhHHHHHHh
Confidence            6778999999999999999999999999999999999996 4554 222  4568999988  8887653

>3zvl_A Bifunctional polynucleotide phosphatase/kinase; hydrolase-transferase complex, base excision repair, BER, non-homologous END-joining, NHEJ; 1.65A {Mus musculus} PDB: 3zvm_A* 3zvn_A* 1yj5_A 3u7e_B* 3u7f_B* 3u7h_B* 3u7g_A*

Probab=99.36  E-value=7.8e-13  Score=120.99  Aligned_cols=95  Identities=23%  Similarity=0.288  Sum_probs=84.2

Q ss_pred             CChhHHHHHhcCC---CCeEEEeCCC------------hHHHHHHHHHcCCccccceeEeeccCCCCCCCCCCCCCcccc
Q 027403           57 PDPVLRNLLLSMP---QRKIIFTNAD------------QKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENN  121 (224)
Q Consensus        57 ~~~g~~~~L~~l~---~~~~I~Tn~~------------~~~~~~~l~~lgl~~~fd~ii~~~~~~~~~~~~~~~~~~~~~  121 (224)
                      ++||+.++|+.|+   ++++|+||++            ...+...++.+|+.  |+.+++++++..+             
T Consensus        88 ~~pgv~e~L~~L~~~G~~l~IvTN~~gi~~g~~~~~~~~~~~~~~l~~lgl~--fd~i~~~~~~~~~-------------  152 (416)
T 3zvl_A           88 LYPEIPKKLQELAAEGYKLVIFTNQMGIGRGKLPAEVFKGKVEAVLEKLGVP--FQVLVATHAGLNR-------------  152 (416)
T ss_dssp             SCTTHHHHHHHHHHTTCEEEEEEECHHHHTTSSCHHHHHHHHHHHHHHHTSC--CEEEEECSSSTTS-------------
T ss_pred             hcccHHHHHHHHHHCCCeEEEEeCCccccCCCCCHHHHHHHHHHHHHHcCCC--EEEEEECCCCCCC-------------
Confidence            7899999999996   7899999976            23377889999984  9999999988775             


Q ss_pred             cCCccccccCCCCHHHHHHHHHHhC----CCCCcEEEEeCCh-----------------hcHHHHHHcCCeEEEEC
Q 027403          122 SFSSNQRILCKPSLEAIETAIRIAN----VDPKKTIFFDDSA-----------------RNIASAKAAGLHTVIVG  176 (224)
Q Consensus       122 ~~~~~~~~~~KP~~~~~~~al~~~~----~~~~~~l~VgDs~-----------------~Di~~A~~~G~~~v~v~  176 (224)
                                ||+|.+|..+++++|    ++|++|+||||+.                 .|+.+|+++|++++...
T Consensus       153 ----------KP~p~~~~~a~~~l~~~~~v~~~~~l~VGDs~gr~~~~~~~~~~~d~s~~Di~~A~~aGi~f~~pe  218 (416)
T 3zvl_A          153 ----------KPVSGMWDHLQEQANEGIPISVEDSVFVGDAAGRLANWAPGRKKKDFSCADRLFALNVGLPFATPE  218 (416)
T ss_dssp             ----------TTSSHHHHHHHHHSSTTCCCCGGGCEEECSCSCBCTTSSTTCCSCCSCCHHHHHHHHHTCCEECHH
T ss_pred             ----------CCCHHHHHHHHHHhCCCCCCCHHHeEEEECCCCCcccccccccccCCChhhHHHHHHcCCcccCcH
Confidence                      999999999999998    9999999999997                 79999999999987653

>3n1u_A Hydrolase, HAD superfamily, subfamily III A; structural genomics, PSI-2; 1.80A {Legionella pneumophila} SCOP: c.108.1.0

Probab=99.33  E-value=4.4e-12  Score=103.81  Aligned_cols=104  Identities=17%  Similarity=0.282  Sum_probs=84.7

Q ss_pred             HHHHhcCCCCeEEEeCCChHHHHHHHHHcCCccccceeEeeccCCCCCCCCCCCCCcccccCCccccccCCCCHHHHHHH
Q 027403           62 RNLLLSMPQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCKPSLEAIETA  141 (224)
Q Consensus        62 ~~~L~~l~~~~~I~Tn~~~~~~~~~l~~lgl~~~fd~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~~~~~~~a  141 (224)
                      .+.|+..+++++|+||++...+...++.+|+..+|+.                                .||++.++..+
T Consensus        55 l~~L~~~g~~~~ivTn~~~~~~~~~l~~lgl~~~~~~--------------------------------~kpk~~~~~~~  102 (191)
T 3n1u_A           55 LKLLMAAGIQVAIITTAQNAVVDHRMEQLGITHYYKG--------------------------------QVDKRSAYQHL  102 (191)
T ss_dssp             HHHHHHTTCEEEEECSCCSHHHHHHHHHHTCCEEECS--------------------------------CSSCHHHHHHH
T ss_pred             HHHHHHCCCeEEEEeCcChHHHHHHHHHcCCccceeC--------------------------------CCChHHHHHHH
Confidence            3445555689999999999999999999999887764                                29999999999


Q ss_pred             HHHhCCCCCcEEEEeCChhcHHHHHHcCCeEEEECCCCC--CCCCceEeCC------HhHHHHHH
Q 027403          142 IRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP--VPPADHALNS------IHNIKEAI  198 (224)
Q Consensus       142 l~~~~~~~~~~l~VgDs~~Di~~A~~~G~~~v~v~~~~~--~~~~d~~i~~------~~dl~~~i  198 (224)
                      +++++++|++|+||||+.+|+.+|+++|+.+ .+.++..  ...+++++.+      +.++.+.+
T Consensus       103 ~~~~~~~~~~~~~vGD~~~Di~~~~~ag~~~-~~~~~~~~~~~~ad~v~~~~~~~g~~~~l~~~l  166 (191)
T 3n1u_A          103 KKTLGLNDDEFAYIGDDLPDLPLIQQVGLGV-AVSNAVPQVLEFADWRTERTGGRGAVRELCDLI  166 (191)
T ss_dssp             HHHHTCCGGGEEEEECSGGGHHHHHHSSEEE-ECTTCCHHHHHHSSEECSSCTTTTHHHHHHHHH
T ss_pred             HHHhCCCHHHEEEECCCHHHHHHHHHCCCEE-EeCCccHHHHHhCCEEecCCCCCcHHHHHHHHH
Confidence            9999999999999999999999999999986 4544432  3447888887      45555444

>2b82_A APHA, class B acid phosphatase; DDDD acid phosphatase, metallo-ENZ hydrolase; HET: ADN; 1.25A {Escherichia coli} SCOP: c.108.1.12 PDB: 2b8j_A* 2hf7_A 1rmt_A* 1n9k_A 1rmq_A 1n8n_A* 1rmy_A* 2g1a_A* 3cz4_A 2heg_A* 1z5g_A 1z5u_A* 1z88_A 2aut_A

Probab=99.32  E-value=2.3e-13  Score=113.41  Aligned_cols=96  Identities=20%  Similarity=0.214  Sum_probs=78.2

Q ss_pred             CCChhHHHHHhcCC---CCeEEEeCCChHHHHHHHHHcCCccccceeEeec---cCCCCCCCCCCCCCcccccCCccccc
Q 027403           56 KPDPVLRNLLLSMP---QRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFE---TINPRLQPADNTDGIENNSFSSNQRI  129 (224)
Q Consensus        56 ~~~~g~~~~L~~l~---~~~~I~Tn~~~~~~~~~l~~lgl~~~fd~ii~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~  129 (224)
                      .+.|++.++|+.|+   ++++|+||++...+...++.  +.++|+.++++.   ....                      
T Consensus        88 ~~~~~~~e~l~~L~~~G~~l~ivTn~~~~~~~~~l~~--l~~~f~~i~~~~~~~~~~~----------------------  143 (211)
T 2b82_A           88 IPKEVARQLIDMHVRRGDAIFFVTGRSPTKTETVSKT--LADNFHIPATNMNPVIFAG----------------------  143 (211)
T ss_dssp             EECHHHHHHHHHHHHHTCEEEEEECSCCCSSCCHHHH--HHHHTTCCTTTBCCCEECC----------------------
T ss_pred             CCcHHHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHH--HHHhcCccccccchhhhcC----------------------
Confidence            36789999999886   78999999987766666666  556787653322   1222                      


Q ss_pred             cCCCCHHHHHHHHHHhCCCCCcEEEEeCChhcHHHHHHcCCeEEEECCCCC
Q 027403          130 LCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP  180 (224)
Q Consensus       130 ~~KP~~~~~~~al~~~~~~~~~~l~VgDs~~Di~~A~~~G~~~v~v~~~~~  180 (224)
                       .||+|.+|..+++++|+    |+||||+.+|+.+|+++|++++++.++..
T Consensus       144 -~KP~p~~~~~~~~~~g~----~l~VGDs~~Di~aA~~aG~~~i~v~~g~~  189 (211)
T 2b82_A          144 -DKPGQNTKSQWLQDKNI----RIFYGDSDNDITAARDVGARGIRILRASN  189 (211)
T ss_dssp             -CCTTCCCSHHHHHHTTE----EEEEESSHHHHHHHHHTTCEEEECCCCTT
T ss_pred             -CCCCHHHHHHHHHHCCC----EEEEECCHHHHHHHHHCCCeEEEEecCCC
Confidence             39999999999999998    99999999999999999999999998754

>2x4d_A HLHPP, phospholysine phosphohistidine inorganic pyrophos phosphatase; hydrolase; 1.92A {Homo sapiens}

Probab=99.31  E-value=4.6e-13  Score=111.70  Aligned_cols=72  Identities=17%  Similarity=0.301  Sum_probs=64.3

Q ss_pred             cCCCCHHHHHHHHHHhCCCCCcEEEEeCCh-hcHHHHHHcCCeEEEECCCCC--------CCCCceEeCCHhHHHHHHHH
Q 027403          130 LCKPSLEAIETAIRIANVDPKKTIFFDDSA-RNIASAKAAGLHTVIVGSSVP--------VPPADHALNSIHNIKEAIPE  200 (224)
Q Consensus       130 ~~KP~~~~~~~al~~~~~~~~~~l~VgDs~-~Di~~A~~~G~~~v~v~~~~~--------~~~~d~~i~~~~dl~~~i~~  200 (224)
                      .+||++.+|..+++.+|++|++|++|||+. +|+.+|+++|+.+++|.++..        ...++++++++.++.+++.+
T Consensus       188 ~~kpk~~~~~~~~~~lgi~~~~~i~iGD~~~nDi~~a~~aG~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~~el~~~l~~  267 (271)
T 2x4d_A          188 VGKPSPEFFKSALQAIGVEAHQAVMIGDDIVGDVGGAQRCGMRALQVRTGKFRPSDEHHPEVKADGYVDNLAEAVDLLLQ  267 (271)
T ss_dssp             ESTTCHHHHHHHHHHHTCCGGGEEEEESCTTTTHHHHHHTTCEEEEESSTTCCGGGGGCSSCCCSEEESSHHHHHHHHHH
T ss_pred             ccCCCHHHHHHHHHHhCCCcceEEEECCCcHHHHHHHHHCCCcEEEEcCCCCCchhhcccCCCCCEEeCCHHHHHHHHHh
Confidence            469999999999999999999999999998 999999999999999998732        14489999999999887765


Q ss_pred             H
Q 027403          201 I  201 (224)
Q Consensus       201 ~  201 (224)
                      +
T Consensus       268 ~  268 (271)
T 2x4d_A          268 H  268 (271)
T ss_dssp             H
T ss_pred             h
Confidence            4

>3a1c_A Probable copper-exporting P-type ATPase A; ATP-binding, cell membrane, copper transport, hydrolase, ION transport, magnesium, membrane; HET: ACP; 1.85A {Archaeoglobus fulgidus} PDB: 3a1d_A* 3a1e_A* 2b8e_A 2voy_J 2voy_I

Probab=99.30  E-value=1.2e-11  Score=106.82  Aligned_cols=110  Identities=15%  Similarity=0.218  Sum_probs=91.0

Q ss_pred             CCCCChhHHHHHhcCC---CCeEEEeCCChHHHHHHHHHcCCccccceeEeeccCCCCCCCCCCCCCcccccCCcccccc
Q 027403           54 KLKPDPVLRNLLLSMP---QRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRIL  130 (224)
Q Consensus        54 ~~~~~~g~~~~L~~l~---~~~~I~Tn~~~~~~~~~l~~lgl~~~fd~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  130 (224)
                      ...++||+.++|+.|+   .+++|+||++...+...++.+|+.++|+.++     +                        
T Consensus       161 ~~~~~~g~~~~l~~L~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~f~~i~-----~------------------------  211 (287)
T 3a1c_A          161 SDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLDLVIAEVL-----P------------------------  211 (287)
T ss_dssp             ECCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCSEEECSCC-----T------------------------
T ss_pred             ccccchhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhCCceeeeecC-----h------------------------
Confidence            3578999999999986   6889999999999999999999988887643     1                        


Q ss_pred             CCCCHHHHHHHHHHhCCCCCcEEEEeCChhcHHHHHHcCCeEEEECCCCC--CCCCceEe--CCHhHHHHHHH
Q 027403          131 CKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP--VPPADHAL--NSIHNIKEAIP  199 (224)
Q Consensus       131 ~KP~~~~~~~al~~~~~~~~~~l~VgDs~~Di~~A~~~G~~~v~v~~~~~--~~~~d~~i--~~~~dl~~~i~  199 (224)
                       +++    ..++++++.. ++|++|||+.+|+.+|+++|+. +.+..+..  ...+++++  +++.++.+++.
T Consensus       212 -~~K----~~~~~~l~~~-~~~~~vGDs~~Di~~a~~ag~~-v~~~~~~~~~~~~ad~v~~~~~~~~l~~~l~  277 (287)
T 3a1c_A          212 -HQK----SEEVKKLQAK-EVVAFVGDGINDAPALAQADLG-IAVGSGSDVAVESGDIVLIRDDLRDVVAAIQ  277 (287)
T ss_dssp             -TCH----HHHHHHHTTT-CCEEEEECTTTCHHHHHHSSEE-EEECCCSCCSSCCSSEEESSSCTHHHHHHHH
T ss_pred             -HHH----HHHHHHHhcC-CeEEEEECCHHHHHHHHHCCee-EEeCCCCHHHHhhCCEEEeCCCHHHHHHHHH
Confidence             222    6788999999 9999999999999999999997 55554432  45689999  99999887653

>1k1e_A Deoxy-D-mannose-octulosonate 8-phosphate phosphat; structural genomics, KDO 8-P phosphatase, structure function project, S2F; HET: MES; 1.67A {Haemophilus influenzae RD} SCOP: c.108.1.5 PDB: 1j8d_A*

Probab=99.29  E-value=5.8e-12  Score=101.62  Aligned_cols=114  Identities=15%  Similarity=0.133  Sum_probs=89.7

Q ss_pred             hhHHHHHhcCC---CCeEEEeCCChHHHHHHHHHcCCccccceeEeeccCCCCCCCCCCCCCcccccCCccccccCCCCH
Q 027403           59 PVLRNLLLSMP---QRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCKPSL  135 (224)
Q Consensus        59 ~g~~~~L~~l~---~~~~I~Tn~~~~~~~~~l~~lgl~~~fd~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~~  135 (224)
                      +...++|+.|+   ++++|+||++...+...++.+|+..+|+.                                +||++
T Consensus        38 ~~~~~~l~~L~~~G~~~~i~Tg~~~~~~~~~~~~lgl~~~~~~--------------------------------~k~k~   85 (180)
T 1k1e_A           38 VRDGLGIKMLMDADIQVAVLSGRDSPILRRRIADLGIKLFFLG--------------------------------KLEKE   85 (180)
T ss_dssp             HHHHHHHHHHHHTTCEEEEEESCCCHHHHHHHHHHTCCEEEES--------------------------------CSCHH
T ss_pred             cchHHHHHHHHHCCCeEEEEeCCCcHHHHHHHHHcCCceeecC--------------------------------CCCcH
Confidence            34566777664   78999999999999999999999877743                                29999


Q ss_pred             HHHHHHHHHhCCCCCcEEEEeCChhcHHHHHHcCCeEEEECCCCC--CCCCceEeCCHh--HHH-HHHHHHHhhc
Q 027403          136 EAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP--VPPADHALNSIH--NIK-EAIPEIWEGE  205 (224)
Q Consensus       136 ~~~~~al~~~~~~~~~~l~VgDs~~Di~~A~~~G~~~v~v~~~~~--~~~~d~~i~~~~--dl~-~~i~~~~~~~  205 (224)
                      ..+..++++++++|++|++|||+.+|+.+|+++|+.++. .++..  ...+++++.+..  .+. +++..++...
T Consensus        86 ~~~~~~~~~~~~~~~~~~~vGD~~~Di~~~~~ag~~~~~-~~~~~~~~~~ad~v~~~~~~~g~~~~~~~~~l~~~  159 (180)
T 1k1e_A           86 TACFDLMKQAGVTAEQTAYIGDDSVDLPAFAACGTSFAV-ADAPIYVKNAVDHVLSTHGGKGAFREMSDMILQAQ  159 (180)
T ss_dssp             HHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEEC-TTSCHHHHTTSSEECSSCTTTTHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHcCCeEEe-CCccHHHHhhCCEEecCCCCCcHHHHHHHHHHHhc
Confidence            999999999999999999999999999999999998664 33332  356899988753  233 4455555443

>3ij5_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; IDP022 hydrolase, lipopolysaccharide biosynthesis, magnesium, STRU genomics; 1.95A {Yersinia pestis}

Probab=99.28  E-value=8.8e-12  Score=104.17  Aligned_cols=112  Identities=17%  Similarity=0.234  Sum_probs=88.4

Q ss_pred             HHHHhcCCCCeEEEeCCChHHHHHHHHHcCCccccceeEeeccCCCCCCCCCCCCCcccccCCccccccCCCCHHHHHHH
Q 027403           62 RNLLLSMPQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCKPSLEAIETA  141 (224)
Q Consensus        62 ~~~L~~l~~~~~I~Tn~~~~~~~~~l~~lgl~~~fd~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~~~~~~~a  141 (224)
                      .+.|+..+++++|+||++...+...++++|+..+|+.                                .||++.++..+
T Consensus        85 L~~L~~~G~~l~I~T~~~~~~~~~~l~~lgi~~~f~~--------------------------------~k~K~~~l~~~  132 (211)
T 3ij5_A           85 IRCLITSDIDVAIITGRRAKLLEDRANTLGITHLYQG--------------------------------QSDKLVAYHEL  132 (211)
T ss_dssp             HHHHHHTTCEEEEECSSCCHHHHHHHHHHTCCEEECS--------------------------------CSSHHHHHHHH
T ss_pred             HHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCchhhcc--------------------------------cCChHHHHHHH
Confidence            3455555689999999999999999999999888764                                27889999999


Q ss_pred             HHHhCCCCCcEEEEeCChhcHHHHHHcCCeEEEECCCCC--CCCCceEeCCHh---HHHHHHHHHHhhcC
Q 027403          142 IRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP--VPPADHALNSIH---NIKEAIPEIWEGEG  206 (224)
Q Consensus       142 l~~~~~~~~~~l~VgDs~~Di~~A~~~G~~~v~v~~~~~--~~~~d~~i~~~~---dl~~~i~~~~~~~~  206 (224)
                      ++++|++|++|++|||+.+|+.+|+++|+.++ +..+..  ...+|+++.+..   -+.+++..++...+
T Consensus       133 ~~~lg~~~~~~~~vGDs~nDi~~~~~ag~~~a-~~~~~~~~~~~Ad~v~~~~~~~G~v~e~~~~ll~~~~  201 (211)
T 3ij5_A          133 LATLQCQPEQVAYIGDDLIDWPVMAQVGLSVA-VADAHPLLLPKAHYVTRIKGGRGAVREVCDLILLAQD  201 (211)
T ss_dssp             HHHHTCCGGGEEEEECSGGGHHHHTTSSEEEE-CTTSCTTTGGGSSEECSSCTTTTHHHHHHHHHHHHTT
T ss_pred             HHHcCcCcceEEEEcCCHHHHHHHHHCCCEEE-eCCccHHHHhhCCEEEeCCCCCcHHHHHHHHHHHHcC
Confidence            99999999999999999999999999998754 443332  445899987752   24555555555443

>3mn1_A Probable YRBI family phosphatase; structural genomics, PSI, protein structure initiative, NYSG phosphatase; 1.80A {Pseudomonas syringae PV} PDB: 3nrj_A

Probab=99.28  E-value=8.2e-12  Score=101.83  Aligned_cols=106  Identities=14%  Similarity=0.202  Sum_probs=85.4

Q ss_pred             HHHHHhcCCCCeEEEeCCChHHHHHHHHHcCCccccceeEeeccCCCCCCCCCCCCCcccccCCccccccCCCCHHHHHH
Q 027403           61 LRNLLLSMPQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCKPSLEAIET  140 (224)
Q Consensus        61 ~~~~L~~l~~~~~I~Tn~~~~~~~~~l~~lgl~~~fd~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~~~~~~~  140 (224)
                      +.+.|+..+++++|+||++...+...++++|+.++|+.+                                +|+|..+..
T Consensus        54 ~l~~L~~~g~~~~i~T~~~~~~~~~~~~~lgl~~~f~~~--------------------------------~~K~~~~~~  101 (189)
T 3mn1_A           54 GIKMLIASGVTTAIISGRKTAIVERRAKSLGIEHLFQGR--------------------------------EDKLVVLDK  101 (189)
T ss_dssp             HHHHHHHTTCEEEEECSSCCHHHHHHHHHHTCSEEECSC--------------------------------SCHHHHHHH
T ss_pred             HHHHHHHCCCEEEEEECcChHHHHHHHHHcCCHHHhcCc--------------------------------CChHHHHHH
Confidence            345555556899999999999999999999998888752                                456699999


Q ss_pred             HHHHhCCCCCcEEEEeCChhcHHHHHHcCCeEEEECCCCC--CCCCceEeCC------HhHHHHHHH
Q 027403          141 AIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP--VPPADHALNS------IHNIKEAIP  199 (224)
Q Consensus       141 al~~~~~~~~~~l~VgDs~~Di~~A~~~G~~~v~v~~~~~--~~~~d~~i~~------~~dl~~~i~  199 (224)
                      +++++|++|++|++|||+.+|+.+|+++|+.+ .+..+..  ...+++++.+      +.++.+.+.
T Consensus       102 ~~~~~g~~~~~~~~vGD~~nDi~~~~~ag~~~-~~~~~~~~~~~~ad~v~~~~~~~G~~~~l~~~l~  167 (189)
T 3mn1_A          102 LLAELQLGYEQVAYLGDDLPDLPVIRRVGLGM-AVANAASFVREHAHGITRAQGGEGAAREFCELIL  167 (189)
T ss_dssp             HHHHHTCCGGGEEEEECSGGGHHHHHHSSEEE-ECTTSCHHHHHTSSEECSSCTTTTHHHHHHHHHH
T ss_pred             HHHHcCCChhHEEEECCCHHHHHHHHHCCCeE-EeCCccHHHHHhCCEEecCCCCCcHHHHHHHHHH
Confidence            99999999999999999999999999999974 4444332  3458999887      566665553

>3mmz_A Putative HAD family hydrolase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.84A {Streptomyces avermitilis}

Probab=99.26  E-value=9.8e-12  Score=100.26  Aligned_cols=104  Identities=13%  Similarity=0.144  Sum_probs=84.3

Q ss_pred             HHHHhcCCCCeEEEeCCChHHHHHHHHHcCCccccceeEeeccCCCCCCCCCCCCCcccccCCccccccCCCCHHHHHHH
Q 027403           62 RNLLLSMPQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCKPSLEAIETA  141 (224)
Q Consensus        62 ~~~L~~l~~~~~I~Tn~~~~~~~~~l~~lgl~~~fd~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~~~~~~~a  141 (224)
                      .+.|+..+++++|+||++...+...++++|+. +|+.                                .||++..+..+
T Consensus        48 l~~L~~~g~~~~i~T~~~~~~~~~~~~~lgi~-~~~~--------------------------------~~~k~~~l~~~   94 (176)
T 3mmz_A           48 IAALRKSGLTMLILSTEQNPVVAARARKLKIP-VLHG--------------------------------IDRKDLALKQW   94 (176)
T ss_dssp             HHHHHHTTCEEEEEESSCCHHHHHHHHHHTCC-EEES--------------------------------CSCHHHHHHHH
T ss_pred             HHHHHHCCCeEEEEECcChHHHHHHHHHcCCe-eEeC--------------------------------CCChHHHHHHH
Confidence            45555666899999999999999999999987 4432                                29999999999


Q ss_pred             HHHhCCCCCcEEEEeCChhcHHHHHHcCCeEEEECCCCC--CCCCceEeCC------HhHHHHHHH
Q 027403          142 IRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP--VPPADHALNS------IHNIKEAIP  199 (224)
Q Consensus       142 l~~~~~~~~~~l~VgDs~~Di~~A~~~G~~~v~v~~~~~--~~~~d~~i~~------~~dl~~~i~  199 (224)
                      ++++++++++|++|||+.+|+.+++++|+.+ .+..+..  ...+++++.+      +.++.+++.
T Consensus        95 ~~~~~~~~~~~~~vGD~~nD~~~~~~ag~~v-~~~~~~~~~~~~ad~v~~~~~~~g~~~~l~~~l~  159 (176)
T 3mmz_A           95 CEEQGIAPERVLYVGNDVNDLPCFALVGWPV-AVASAHDVVRGAARAVTTVPGGDGAIREIASWIL  159 (176)
T ss_dssp             HHHHTCCGGGEEEEECSGGGHHHHHHSSEEE-ECTTCCHHHHHHSSEECSSCTTTTHHHHHHHHHH
T ss_pred             HHHcCCCHHHEEEEcCCHHHHHHHHHCCCeE-ECCChhHHHHHhCCEEecCCCCCcHHHHHHHHHH
Confidence            9999999999999999999999999999864 4444332  3447999888      777766553

>3n07_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; structural genomics, phosphatase, PSI-2, protein structure initiative; HET: MSE; 1.76A {Vibrio cholerae}

Probab=99.24  E-value=1.5e-11  Score=101.46  Aligned_cols=96  Identities=15%  Similarity=0.189  Sum_probs=79.8

Q ss_pred             HHHHhcCCCCeEEEeCCChHHHHHHHHHcCCccccceeEeeccCCCCCCCCCCCCCcccccCCccccccCCCCHHHHHHH
Q 027403           62 RNLLLSMPQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCKPSLEAIETA  141 (224)
Q Consensus        62 ~~~L~~l~~~~~I~Tn~~~~~~~~~l~~lgl~~~fd~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~~~~~~~a  141 (224)
                      .+.|+..+++++|+||++...+...++.+|+.++|+.                                .||++..+..+
T Consensus        61 l~~L~~~G~~~~ivT~~~~~~~~~~l~~lgi~~~~~~--------------------------------~k~k~~~~~~~  108 (195)
T 3n07_A           61 VKALMNAGIEIAIITGRRSQIVENRMKALGISLIYQG--------------------------------QDDKVQAYYDI  108 (195)
T ss_dssp             HHHHHHTTCEEEEECSSCCHHHHHHHHHTTCCEEECS--------------------------------CSSHHHHHHHH
T ss_pred             HHHHHHCCCEEEEEECcCHHHHHHHHHHcCCcEEeeC--------------------------------CCCcHHHHHHH
Confidence            4455555689999999999999999999999877653                                29999999999


Q ss_pred             HHHhCCCCCcEEEEeCChhcHHHHHHcCCeEEEECCCCC--CCCCceEeCC
Q 027403          142 IRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP--VPPADHALNS  190 (224)
Q Consensus       142 l~~~~~~~~~~l~VgDs~~Di~~A~~~G~~~v~v~~~~~--~~~~d~~i~~  190 (224)
                      +++++++|++|++|||+.+|+.+++++|+.+ .+.++..  ...+++++.+
T Consensus       109 ~~~~~~~~~~~~~vGD~~nDi~~~~~ag~~v-a~~na~~~~~~~ad~v~~~  158 (195)
T 3n07_A          109 CQKLAIAPEQTGYIGDDLIDWPVMEKVALRV-CVADGHPLLAQRANYVTHI  158 (195)
T ss_dssp             HHHHCCCGGGEEEEESSGGGHHHHTTSSEEE-ECTTSCHHHHHHCSEECSS
T ss_pred             HHHhCCCHHHEEEEcCCHHHHHHHHHCCCEE-EECChHHHHHHhCCEEEcC
Confidence            9999999999999999999999999999874 4444432  3347888876

>3fvv_A Uncharacterized protein; unknown function, structural genomics, PSI,MCSG, protein STR initiative, midwest center for structural genomics; 2.10A {Bordetella pertussis}

Probab=99.23  E-value=1.9e-11  Score=100.47  Aligned_cols=107  Identities=7%  Similarity=0.010  Sum_probs=82.8

Q ss_pred             CCChhHHHHHhcCC---CCeEEEeCCChHHHHHHHHHcCCccccceeEeeccCCCCCCCCCCCCCcccccCCccccccCC
Q 027403           56 KPDPVLRNLLLSMP---QRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCK  132 (224)
Q Consensus        56 ~~~~g~~~~L~~l~---~~~~I~Tn~~~~~~~~~l~~lgl~~~fd~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~K  132 (224)
                      .++||+.++|+.|+   ++++|+||++...+...++++|+.++|...+..++...            ..... .....++
T Consensus        92 ~~~~g~~~~l~~l~~~g~~~~ivS~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~------------~g~~~-~~~~~~~  158 (232)
T 3fvv_A           92 SLTVQAVDVVRGHLAAGDLCALVTATNSFVTAPIARAFGVQHLIATDPEYRDGRY------------TGRIE-GTPSFRE  158 (232)
T ss_dssp             GCCHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCCEEEECEEEEETTEE------------EEEEE-SSCSSTH
T ss_pred             hcCHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCCEEEEcceEEECCEE------------eeeec-CCCCcch
Confidence            56999999999986   68899999999999999999999877765443322100            00000 0011247


Q ss_pred             CCHHHHHHHHHHhC---CCCCcEEEEeCChhcHHHHHHcCCeEEEE
Q 027403          133 PSLEAIETAIRIAN---VDPKKTIFFDDSARNIASAKAAGLHTVIV  175 (224)
Q Consensus       133 P~~~~~~~al~~~~---~~~~~~l~VgDs~~Di~~A~~~G~~~v~v  175 (224)
                      +++..+..+++++|   ++|++|++||||.+|+.+|+.+|+.++..
T Consensus       159 ~K~~~~~~~~~~~~~~~~~~~~~~~vGDs~~D~~~~~~ag~~~~~~  204 (232)
T 3fvv_A          159 GKVVRVNQWLAGMGLALGDFAESYFYSDSVNDVPLLEAVTRPIAAN  204 (232)
T ss_dssp             HHHHHHHHHHHHTTCCGGGSSEEEEEECCGGGHHHHHHSSEEEEES
T ss_pred             HHHHHHHHHHHHcCCCcCchhheEEEeCCHhhHHHHHhCCCeEEEC
Confidence            88899999999999   99999999999999999999999986653

>3epr_A Hydrolase, haloacid dehalogenase-like family; structural genomics, unknown function, HAD superfamily hydro PSI-2; 1.55A {Streptococcus agalactiae serogroup V} SCOP: c.108.1.14 PDB: 1ys9_A 1wvi_A 1ydf_A

Probab=99.18  E-value=2.4e-12  Score=109.21  Aligned_cols=65  Identities=17%  Similarity=0.282  Sum_probs=59.0

Q ss_pred             CCCCHHHHHHHHHHhCCCCCcEEEEeCC-hhcHHHHHHcCCeEEEECCCCC------C--CCCceEeCCHhHHH
Q 027403          131 CKPSLEAIETAIRIANVDPKKTIFFDDS-ARNIASAKAAGLHTVIVGSSVP------V--PPADHALNSIHNIK  195 (224)
Q Consensus       131 ~KP~~~~~~~al~~~~~~~~~~l~VgDs-~~Di~~A~~~G~~~v~v~~~~~------~--~~~d~~i~~~~dl~  195 (224)
                      +||++.+|..+++++|++|+++++|||+ .+|+.+|+++|+++++|.+|..      .  ..+|++++++.+|.
T Consensus       181 ~Kp~~~~~~~~~~~~~~~~~~~~~vGD~~~~Di~~a~~aG~~~~~v~~g~~~~~~~~~~~~~pd~~~~~l~~l~  254 (264)
T 3epr_A          181 GKPNAIIMNKALEILNIPRNQAVMVGDNYLTDIMAGINNDIDTLLVTTGFTTVEEVPDLPIQPSYVLASLDEWT  254 (264)
T ss_dssp             STTSHHHHHHHHHHHTSCGGGEEEEESCTTTHHHHHHHHTCEEEEETTSSSCGGGGGGCSSCCSEEESCGGGCC
T ss_pred             CCCCHHHHHHHHHHhCcCcccEEEECCCcHHHHHHHHHCCCeEEEECCCCCChHHHHhcCCCCCEEECCHHHHh
Confidence            5999999999999999999999999999 6999999999999999998854      1  26899999998764

>3skx_A Copper-exporting P-type ATPase B; P1B-ATPase, ATP binding domain, copper(II) transporter, MEMB protein, hydrolase; 1.59A {Archaeoglobus fulgidus} PDB: 3sky_A*

Probab=99.17  E-value=9.6e-12  Score=104.72  Aligned_cols=109  Identities=19%  Similarity=0.276  Sum_probs=87.4

Q ss_pred             CCChhHHHHHhcCC---CCeEEEeCCChHHHHHHHHHcCCccccceeEeeccCCCCCCCCCCCCCcccccCCccccccCC
Q 027403           56 KPDPVLRNLLLSMP---QRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCK  132 (224)
Q Consensus        56 ~~~~g~~~~L~~l~---~~~~I~Tn~~~~~~~~~l~~lgl~~~fd~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~K  132 (224)
                      .++||+.++|+.|+   .+++|+||++...+...++.+|+.++|+.+++.+.....                       |
T Consensus       144 ~~~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~~~~~gl~~~f~~~~~~~k~~~~-----------------------k  200 (280)
T 3skx_A          144 RIRPESREAISKLKAIGIKCMMLTGDNRFVAKWVAEELGLDDYFAEVLPHEKAEKV-----------------------K  200 (280)
T ss_dssp             EECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCSEEECSCCGGGHHHHH-----------------------H
T ss_pred             CCCHhHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCChhHhHhcCHHHHHHHH-----------------------H
Confidence            68899999999886   678899999999999999999999999988877655432                       6


Q ss_pred             CCHHHHHHHHHHhCCCCCcEEEEeCChhcHHHHHHcCCeEEEECCCCC--CCCCceEe--CCHhHHHHHHHH
Q 027403          133 PSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP--VPPADHAL--NSIHNIKEAIPE  200 (224)
Q Consensus       133 P~~~~~~~al~~~~~~~~~~l~VgDs~~Di~~A~~~G~~~v~v~~~~~--~~~~d~~i--~~~~dl~~~i~~  200 (224)
                      |.++.+            +|++|||+.+|+.+|+++|+. +.+..+..  ...+++++  +++.++.+++..
T Consensus       201 ~~~~~~------------~~~~vGD~~nDi~~~~~Ag~~-va~~~~~~~~~~~a~~~~~~~~~~~l~~~l~~  259 (280)
T 3skx_A          201 EVQQKY------------VTAMVGDGVNDAPALAQADVG-IAIGAGTDVAVETADIVLVRNDPRDVAAIVEL  259 (280)
T ss_dssp             HHHTTS------------CEEEEECTTTTHHHHHHSSEE-EECSCCSSSCCCSSSEECSSCCTHHHHHHHHH
T ss_pred             HHHhcC------------CEEEEeCCchhHHHHHhCCce-EEecCCcHHHHhhCCEEEeCCCHHHHHHHHHH
Confidence            555543            799999999999999999973 44444332  34577877  999999988753

>3pdw_A Uncharacterized hydrolase YUTF; structural genomics, PSI2, NYSGXRC, protein structure initia YORK SGX research center for structural genomics; 1.60A {Bacillus subtilis} SCOP: c.108.1.0

Probab=99.16  E-value=4.2e-12  Score=107.35  Aligned_cols=69  Identities=28%  Similarity=0.420  Sum_probs=61.3

Q ss_pred             CCCCHHHHHHHHHHhCCCCCcEEEEeCC-hhcHHHHHHcCCeEEEECCCCC-----CC---CCceEeCCHhHHHHHHH
Q 027403          131 CKPSLEAIETAIRIANVDPKKTIFFDDS-ARNIASAKAAGLHTVIVGSSVP-----VP---PADHALNSIHNIKEAIP  199 (224)
Q Consensus       131 ~KP~~~~~~~al~~~~~~~~~~l~VgDs-~~Di~~A~~~G~~~v~v~~~~~-----~~---~~d~~i~~~~dl~~~i~  199 (224)
                      +||++.+|+.+++.+|++++++++|||+ .+|+.+|+++|+.++++.+|..     ..   .+|++++++.||.+-+.
T Consensus       182 ~kp~~~~~~~~~~~lgi~~~~~~~iGD~~~~Di~~~~~aG~~~~~v~~g~~~~~~~~~~~~~~d~v~~~~~el~~~~~  259 (266)
T 3pdw_A          182 GKPESIIMEQAMRVLGTDVSETLMVGDNYATDIMAGINAGMDTLLVHTGVTKREHMTDDMEKPTHAIDSLTEWIPYIE  259 (266)
T ss_dssp             STTSSHHHHHHHHHHTCCGGGEEEEESCTTTHHHHHHHHTCEEEEECCC------CCTTSCCCSEEESSGGGGHHHHH
T ss_pred             CCCCHHHHHHHHHHcCCChhhEEEECCCcHHHHHHHHHCCCeEEEECCCCCChHHHHhcCCCCCEEeCCHHHHHHHhh
Confidence            5999999999999999999999999999 7999999999999999998753     12   59999999999987554

>2i7d_A 5'(3')-deoxyribonucleotidase, cytosolic type; hydrolase; HET: DUR; 1.20A {Homo sapiens} PDB: 2jar_A* 2jao_A*

Probab=99.14  E-value=8.7e-13  Score=107.09  Aligned_cols=120  Identities=15%  Similarity=0.115  Sum_probs=90.7

Q ss_pred             HHHHHHHhccCCCCCCCCChhHHHHHhcCC----CCeEEEeCCChHHHHHHHHHcCCccccceeEeeccCCCCCCCCCCC
Q 027403           40 DEFHAFVHGKLPYEKLKPDPVLRNLLLSMP----QRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNT  115 (224)
Q Consensus        40 ~~~~~~~~~~~~~~~~~~~~g~~~~L~~l~----~~~~I~Tn~~~~~~~~~l~~lgl~~~fd~ii~~~~~~~~~~~~~~~  115 (224)
                      +.+...+..........++||+.++|+.|+    ++++|+||++...+...++++|+   |+.++++             
T Consensus        57 ~~~~~~~~~~~~~~~~~~~~g~~e~L~~L~~~~g~~~~ivT~~~~~~~~~~l~~~gl---f~~i~~~-------------  120 (193)
T 2i7d_A           57 DKVASVYEAPGFFLDLEPIPGALDAVREMNDLPDTQVFICTSPLLKYHHCVGEKYRW---VEQHLGP-------------  120 (193)
T ss_dssp             HHHHHHHTSTTTTTTCCBCTTHHHHHHHHHTSTTEEEEEEECCCSSCTTTHHHHHHH---HHHHHCH-------------
T ss_pred             HHHHHHHHhcCccccCccCcCHHHHHHHHHhCCCCeEEEEeCCChhhHHHHHHHhCc---hhhhcCH-------------
Confidence            344444443212346789999999999986    35789999999888889999888   7765532             


Q ss_pred             CCcccccCCccccccCCCCHHHHHHHHHHhCCCCCcEEEEeCChhc----HHHHH-HcCCeEEEECCCCCCC---CCce-
Q 027403          116 DGIENNSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARN----IASAK-AAGLHTVIVGSSVPVP---PADH-  186 (224)
Q Consensus       116 ~~~~~~~~~~~~~~~~KP~~~~~~~al~~~~~~~~~~l~VgDs~~D----i~~A~-~~G~~~v~v~~~~~~~---~~d~-  186 (224)
                                              .++++++++|++|+||||+..|    +.+|+ ++|++++++.++....   .+++ 
T Consensus       121 ------------------------~~~~~~~~~~~~~~~vgDs~~dD~~~i~~A~~~aG~~~i~~~~~~~~~~~~~~~~~  176 (193)
T 2i7d_A          121 ------------------------QFVERIILTRDKTVVLGDLLIDDKDTVRGQEETPSWEHILFTCCHNRHLVLPPTRR  176 (193)
T ss_dssp             ------------------------HHHTTEEECSCGGGBCCSEEEESSSCCCSSCSSCSSEEEEECCGGGTTCCCCTTSC
T ss_pred             ------------------------HHHHHcCCCcccEEEECCchhhCcHHHhhcccccccceEEEEeccCcccccccchH
Confidence                                    2677889999999999999998    99999 9999999998764321   2344 


Q ss_pred             EeCCH-hHHHHHHH
Q 027403          187 ALNSI-HNIKEAIP  199 (224)
Q Consensus       187 ~i~~~-~dl~~~i~  199 (224)
                      .++++ +++.+++.
T Consensus       177 ~v~~~~~~~~~~~~  190 (193)
T 2i7d_A          177 RLLSWSDNWREILD  190 (193)
T ss_dssp             EECSTTSCHHHHHH
T ss_pred             HHhhHHHHHHHHhh
Confidence            68898 66666553

>1q92_A 5(3)-deoxyribonucleotidase; alpha-beta rossman fold, hydrolase; HET: DRM; 1.40A {Homo sapiens} SCOP: c.108.1.8 PDB: 1mh9_A* 1q91_A* 1z4m_A* 1z4i_A* 1z4j_A* 1z4l_A* 1z4k_A* 1z4p_X* 1z4q_A* 2jau_A* 2jaw_A* 3u19_A* 3u13_A 4e88_A

Probab=99.12  E-value=1e-12  Score=107.11  Aligned_cols=118  Identities=15%  Similarity=0.136  Sum_probs=91.6

Q ss_pred             HHHHHHhccCCCCCCCCChhHHHHHhcCC----CCeEEEeCCChHHHHHHHHHcCCcc-ccceeEeeccCCCCCCCCCCC
Q 027403           41 EFHAFVHGKLPYEKLKPDPVLRNLLLSMP----QRKIIFTNADQKHAMEVLGRLGLED-CFEGIICFETINPRLQPADNT  115 (224)
Q Consensus        41 ~~~~~~~~~~~~~~~~~~~g~~~~L~~l~----~~~~I~Tn~~~~~~~~~l~~lgl~~-~fd~ii~~~~~~~~~~~~~~~  115 (224)
                      ++...+........+.++||+.++|+.|+    ++++|+||+++..+...++++|+.+ +|+         .        
T Consensus        60 ~~~~~~~~~~~~~~~~~~~g~~e~L~~L~~~~g~~~~ivT~~~~~~~~~~l~~~~l~~~~f~---------~--------  122 (197)
T 1q92_A           60 KAISIWESKNFFFELEPLPGAVEAVKEMASLQNTDVFICTSPIKMFKYCPYEKYAWVEKYFG---------P--------  122 (197)
T ss_dssp             HHHHHHTSTTTTTTCCBCTTHHHHHHHHHHSTTEEEEEEECCCSCCSSHHHHHHHHHHHHHC---------G--------
T ss_pred             HHHHHHHhhhhhhcCCcCcCHHHHHHHHHhcCCCeEEEEeCCccchHHHHHHHhchHHHhch---------H--------
Confidence            34444433222346789999999999985    4678999999988888999999887 886         1        


Q ss_pred             CCcccccCCccccccCCCCHHHHHHHHHHhCCCCCcEEEEeCChhc----HHHHH-HcCCeEEEECCCCCCC---CCce-
Q 027403          116 DGIENNSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARN----IASAK-AAGLHTVIVGSSVPVP---PADH-  186 (224)
Q Consensus       116 ~~~~~~~~~~~~~~~~KP~~~~~~~al~~~~~~~~~~l~VgDs~~D----i~~A~-~~G~~~v~v~~~~~~~---~~d~-  186 (224)
                                              .++++++++|++|++|||+..|    +.+|+ ++|++++++.++....   .+++ 
T Consensus       123 ------------------------~~~~~l~~~~~~~~~vgDs~~dD~~~~~~a~~~aG~~~i~~~~~~~~~~~~~~~~~  178 (197)
T 1q92_A          123 ------------------------DFLEQIVLTRDKTVVSADLLIDDRPDITGAEPTPSWEHVLFTACHNQHLQLQPPRR  178 (197)
T ss_dssp             ------------------------GGGGGEEECSCSTTSCCSEEEESCSCCCCSCSSCSSEEEEECCTTTTTCCCCTTCE
T ss_pred             ------------------------HHHHHhccCCccEEEECcccccCCchhhhcccCCCceEEEecCcccccccccccch
Confidence                                    4567789999999999999998    99999 9999999998875421   2234 


Q ss_pred             EeCCH-hHHHHHHH
Q 027403          187 ALNSI-HNIKEAIP  199 (224)
Q Consensus       187 ~i~~~-~dl~~~i~  199 (224)
                      +++++ .++..++.
T Consensus       179 ~v~~~~~~l~~~l~  192 (197)
T 1q92_A          179 RLHSWADDWKAILD  192 (197)
T ss_dssp             EECCTTSCHHHHHH
T ss_pred             hhhhHHHHHHHHhc
Confidence            79999 58777665

>2yj3_A Copper-transporting ATPase; hydrolase, P-type ATPase, COPB, heavy metal translocation; 2.20A {Sulfolobus solfataricus} PDB: 2iye_A 2yj6_A* 2yj5_A* 2yj4_A*

Probab=98.72  E-value=6.4e-12  Score=107.63  Aligned_cols=110  Identities=19%  Similarity=0.266  Sum_probs=89.5

Q ss_pred             CCCChhHHHHHhcCC---CCeEEEeCCChHHHHHHHHHcCCccccceeEeeccCCCCCCCCCCCCCcccccCCccccccC
Q 027403           55 LKPDPVLRNLLLSMP---QRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILC  131 (224)
Q Consensus        55 ~~~~~g~~~~L~~l~---~~~~I~Tn~~~~~~~~~l~~lgl~~~fd~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  131 (224)
                      .+++||+.++|+.|+   ++++|+||.+...+..+++++|+.++|+.++                               
T Consensus       135 ~~~~~g~~~~l~~L~~~g~~~~i~T~~~~~~~~~~~~~~gl~~~f~~~~-------------------------------  183 (263)
T 2yj3_A          135 DVPRPNLKDYLEKLKNEGLKIIILSGDKEDKVKELSKELNIQEYYSNLS-------------------------------  183 (263)
Confidence            468999999999997   6788999999999999999999998988644                               


Q ss_pred             CCCHHHHHHHHHHhCCCCCcEEEEeCChhcHHHHHHcCCeEEEECCCCC--CCCCceEe--CCHhHHHHHHH
Q 027403          132 KPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP--VPPADHAL--NSIHNIKEAIP  199 (224)
Q Consensus       132 KP~~~~~~~al~~~~~~~~~~l~VgDs~~Di~~A~~~G~~~v~v~~~~~--~~~~d~~i--~~~~dl~~~i~  199 (224)
                         |..+..++++++.++++|+||||+.+|+.+|+++|+...+- .+..  ...+|+++  +++.+|.+++.
T Consensus       184 ---p~~k~~~~~~l~~~~~~~~~VGD~~~D~~aa~~Agv~va~g-~~~~~~~~~ad~v~~~~~l~~l~~~l~  251 (263)
T 2yj3_A          184 ---PEDKVRIIEKLKQNGNKVLMIGDGVNDAAALALADVSVAMG-NGVDISKNVADIILVSNDIGTLLGLIK  251 (263)
Confidence               12235688999999999999999999999999999754332 2222  45589999  89999887653

>3qgm_A P-nitrophenyl phosphatase (PHO2); structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 2.00A {Archaeoglobus fulgidus} SCOP: c.108.1.0

Probab=99.09  E-value=1.9e-10  Score=97.06  Aligned_cols=71  Identities=30%  Similarity=0.415  Sum_probs=63.6

Q ss_pred             cccCCCCHHHHHHHHHHhCCCCCcEEEEeCC-hhcHHHHHHcCCeEEEECCCCCC------------CCCceEeCCHhHH
Q 027403          128 RILCKPSLEAIETAIRIANVDPKKTIFFDDS-ARNIASAKAAGLHTVIVGSSVPV------------PPADHALNSIHNI  194 (224)
Q Consensus       128 ~~~~KP~~~~~~~al~~~~~~~~~~l~VgDs-~~Di~~A~~~G~~~v~v~~~~~~------------~~~d~~i~~~~dl  194 (224)
                      ...+||++.+|..+++.+|++|+++++|||+ .+|+.+|+++|+++++|.+|...            ..+|++++++.+|
T Consensus       183 ~~~~kp~~~~~~~~~~~~~~~~~~~~~vGD~~~~Di~~~~~~g~~~~~v~~g~~~~~~~~~~~~~~~~~~d~v~~~~~el  262 (268)
T 3qgm_A          183 VVVGKPSEVIMREALDILGLDAKDVAVVGDQIDVDVAAGKAIGAETVLVLTGVTTRENLDQMIERHGLKPDYVFNSLKDM  262 (268)
T ss_dssp             EECSTTSHHHHHHHHHHHTCCGGGEEEEESCTTTHHHHHHHHTCEEEEESSSSCCTTTHHHHHHHHTCCCSEEESSHHHH
T ss_pred             eecCCCCHHHHHHHHHHhCCCchhEEEECCCchHHHHHHHHCCCcEEEECCCCCCHHHHHhhccccCCCCCEEECCHHHH
Confidence            3457999999999999999999999999999 59999999999999999988642            1689999999999


Q ss_pred             HHHH
Q 027403          195 KEAI  198 (224)
Q Consensus       195 ~~~i  198 (224)
                      .++|
T Consensus       263 ~~~l  266 (268)
T 3qgm_A          263 VEAL  266 (268)
T ss_dssp             HHTC
T ss_pred             HHHH
Confidence            8765

>3bwv_A Putative 5'(3')-deoxyribonucleotidase; NP_764060.1, deoxyribonucleotidase-like protein; HET: MSE; 1.55A {Staphylococcus epidermidis}

Probab=99.08  E-value=9.7e-10  Score=87.83  Aligned_cols=104  Identities=14%  Similarity=0.142  Sum_probs=78.7

Q ss_pred             CCCCCChhHHHHHhcCC--CCeEEEeCC---Ch--HHHHHHHHH-cCCccccceeEeeccCCCCCCCCCCCCCcccccCC
Q 027403           53 EKLKPDPVLRNLLLSMP--QRKIIFTNA---DQ--KHAMEVLGR-LGLEDCFEGIICFETINPRLQPADNTDGIENNSFS  124 (224)
Q Consensus        53 ~~~~~~~g~~~~L~~l~--~~~~I~Tn~---~~--~~~~~~l~~-lgl~~~fd~ii~~~~~~~~~~~~~~~~~~~~~~~~  124 (224)
                      ...+++||+.++|+.|+  ++++|+||+   ++  ......+.. ++...+|+.++++++.                   
T Consensus        66 ~~~~~~pg~~e~L~~L~~~~~~~i~T~~~~~~~~~~~~~~~l~~~f~~~~~~~~i~~~~~~-------------------  126 (180)
T 3bwv_A           66 RNLDVMPHAQEVVKQLNEHYDIYIATAAMDVPTSFHDKYEWLLEYFPFLDPQHFVFCGRKN-------------------  126 (180)
T ss_dssp             GSCCBCTTHHHHHHHHTTTSEEEEEECC--CCSHHHHHHHHHHHHCTTSCGGGEEECSCGG-------------------
T ss_pred             ccCCCCcCHHHHHHHHHhcCCEEEEeCCCCcchHHHHHHHHHHHHcCCCCcccEEEeCCcC-------------------
Confidence            35789999999999997  578999998   43  222444555 5776778877766531                   


Q ss_pred             ccccccCCCCHHHHHHHHHHhCCCCCcEEEEeCChhcHHHHHHcCCeEEEECCCCC-CCCCceEeCCHhHHHHHHHHH
Q 027403          125 SNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP-VPPADHALNSIHNIKEAIPEI  201 (224)
Q Consensus       125 ~~~~~~~KP~~~~~~~al~~~~~~~~~~l~VgDs~~Di~~A~~~G~~~v~v~~~~~-~~~~d~~i~~~~dl~~~i~~~  201 (224)
                             +            +    ++|++||||.+|+.  .++| +++++.++.. ...++++++++.||.+++.++
T Consensus       127 -------~------------l----~~~l~ieDs~~~i~--~aaG-~~i~~~~~~~~~~~~~~~i~~~~el~~~l~~~  178 (180)
T 3bwv_A          127 -------I------------I----LADYLIDDNPKQLE--IFEG-KSIMFTASHNVYEHRFERVSGWRDVKNYFNSI  178 (180)
T ss_dssp             -------G------------B----CCSEEEESCHHHHH--HCSS-EEEEECCGGGTTCCSSEEECSHHHHHHHHHHH
T ss_pred             -------e------------e----cccEEecCCcchHH--HhCC-CeEEeCCCcccCCCCceecCCHHHHHHHHHHh
Confidence                   1            1    67999999999986  4589 9999987643 356889999999999887654

>3ewi_A N-acylneuraminate cytidylyltransferase; beta barrel, HAD-like, rossmannoid fold, nucleotidyltransferase, nucleus; 1.90A {Mus musculus}

Probab=99.05  E-value=6.3e-10  Score=89.87  Aligned_cols=107  Identities=11%  Similarity=0.101  Sum_probs=80.2

Q ss_pred             HHHHhcCCCCeEEEeCCChHHHHHHHH--HcCCccccceeEeeccCCCCCCCCCCCCCcccccCCccccccCCCCHHHHH
Q 027403           62 RNLLLSMPQRKIIFTNADQKHAMEVLG--RLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCKPSLEAIE  139 (224)
Q Consensus        62 ~~~L~~l~~~~~I~Tn~~~~~~~~~l~--~lgl~~~fd~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~~~~~~  139 (224)
                      .+.|+...++++|+||.  ..+...++  .+|+. +|.        +                        +++++..+.
T Consensus        45 L~~Lk~~Gi~~~I~Tg~--~~~~~~l~~l~lgi~-~~~--------g------------------------~~~K~~~l~   89 (168)
T 3ewi_A           45 ISLLKKSGIEVRLISER--ACSKQTLSALKLDCK-TEV--------S------------------------VSDKLATVD   89 (168)
T ss_dssp             HHHHHHTTCEEEEECSS--CCCHHHHHTTCCCCC-EEC--------S------------------------CSCHHHHHH
T ss_pred             HHHHHHCCCEEEEEeCc--HHHHHHHHHhCCCcE-EEE--------C------------------------CCChHHHHH
Confidence            45566666899999999  66778888  56654 331        1                        278899999


Q ss_pred             HHHHHhCCCCCcEEEEeCChhcHHHHHHcCCeEEEECCCCC--CCCCceEeCCHhH---HHHHHHHHHhh
Q 027403          140 TAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP--VPPADHALNSIHN---IKEAIPEIWEG  204 (224)
Q Consensus       140 ~al~~~~~~~~~~l~VgDs~~Di~~A~~~G~~~v~v~~~~~--~~~~d~~i~~~~d---l~~~i~~~~~~  204 (224)
                      .++++++++|++|++|||+.+|+..++.+|+. +.+.++.+  ...++++..+-.+   +.+++..++..
T Consensus        90 ~~~~~~gi~~~~~~~vGD~~nDi~~~~~ag~~-~a~~na~~~~k~~Ad~v~~~~~~~G~~~~~~~~il~~  158 (168)
T 3ewi_A           90 EWRKEMGLCWKEVAYLGNEVSDEECLKRVGLS-AVPADACSGAQKAVGYICKCSGGRGAIREFAEHIFLL  158 (168)
T ss_dssp             HHHHHTTCCGGGEEEECCSGGGHHHHHHSSEE-EECTTCCHHHHTTCSEECSSCTTTTHHHHHHHHHHHH
T ss_pred             HHHHHcCcChHHEEEEeCCHhHHHHHHHCCCE-EEeCChhHHHHHhCCEEeCCCCCccHHHHHHHHHHHh
Confidence            99999999999999999999999999999997 55666544  5668898876322   44444444444

>2hhl_A CTD small phosphatase-like protein; CTD phosphatase, keggins anion, structural genomics, PSI, protein structure initiative; HET: KEG; 2.10A {Homo sapiens}

Probab=99.00  E-value=2e-11  Score=101.11  Aligned_cols=117  Identities=14%  Similarity=0.064  Sum_probs=93.0

Q ss_pred             CCCChhHHHHHhcCC--CCeEEEeCCChHHHHHHHHHcCCccccceeEeeccCCCCCCCCCCCCCcccccCCccccccCC
Q 027403           55 LKPDPVLRNLLLSMP--QRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCK  132 (224)
Q Consensus        55 ~~~~~g~~~~L~~l~--~~~~I~Tn~~~~~~~~~l~~lgl~~~fd~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~K  132 (224)
                      +.+.||+.++|+.++  ++++|+||+++.++..+++.+++.++|+.+++.+++...                       |
T Consensus        67 v~~RPgv~efL~~l~~~~~i~I~Tss~~~~a~~vl~~ld~~~~f~~~l~rd~~~~~-----------------------k  123 (195)
T 2hhl_A           67 VLKRPHVDEFLQRMGQLFECVLFTASLAKYADPVADLLDRWGVFRARLFRESCVFH-----------------------R  123 (195)
T ss_dssp             EEECTTHHHHHHHHHHHSEEEEECSSCHHHHHHHHHHHCCSSCEEEEECGGGCEEE-----------------------T
T ss_pred             EEeCcCHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHhCCcccEEEEEEcccceec-----------------------C
Confidence            467899999999997  899999999999999999999999999999988876542                       3


Q ss_pred             CCHHHHHHHHHHhCCCCCcEEEEeCChhcHHHHHHcCCeEEEECCCCCCCCCceEeCCHhHHHHHHHHHHhh
Q 027403          133 PSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVPVPPADHALNSIHNIKEAIPEIWEG  204 (224)
Q Consensus       133 P~~~~~~~al~~~~~~~~~~l~VgDs~~Di~~A~~~G~~~v~v~~~~~~~~~d~~i~~~~dl~~~i~~~~~~  204 (224)
                         ..|..+++++|.++++|++|||+..++.+|.++|+..+.+  ..  ...|-   .+.+|..++..+-..
T Consensus       124 ---~~~lK~L~~Lg~~~~~~vivDDs~~~~~~~~~ngi~i~~~--~~--~~~D~---eL~~L~~~L~~l~~~  185 (195)
T 2hhl_A          124 ---GNYVKDLSRLGRELSKVIIVDNSPASYIFHPENAVPVQSW--FD--DMTDT---ELLDLIPFFEGLSRE  185 (195)
T ss_dssp             ---TEEECCGGGSSSCGGGEEEEESCGGGGTTCGGGEEECCCC--SS--CTTCC---HHHHHHHHHHHHHC-
T ss_pred             ---CceeeeHhHhCCChhHEEEEECCHHHhhhCccCccEEeee--cC--CCChH---HHHHHHHHHHHHHhC
Confidence               5677888999999999999999999999999999986332  21  11222   345566666655444

>3gyg_A NTD biosynthesis operon putative hydrolase NTDB; PF05116, PF08282, MCSG, PSI-2, haloacid dehalogenase-like HY structural genomics; 2.45A {Bacillus subtilis subsp}

Probab=98.96  E-value=3.6e-10  Score=96.81  Aligned_cols=125  Identities=10%  Similarity=0.061  Sum_probs=96.4

Q ss_pred             CCChhHHHHHhcC----CCCeEEEeCC---------------------ChHHHHHHHHHcCCcccccee----------E
Q 027403           56 KPDPVLRNLLLSM----PQRKIIFTNA---------------------DQKHAMEVLGRLGLEDCFEGI----------I  100 (224)
Q Consensus        56 ~~~~g~~~~L~~l----~~~~~I~Tn~---------------------~~~~~~~~l~~lgl~~~fd~i----------i  100 (224)
                      .+.+++.++|+.+    ..++.+.|+.                     ....+...++++|+..+|..+          .
T Consensus       122 ~~~~~v~e~l~~l~~~~g~~l~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~  201 (289)
T 3gyg_A          122 FSKEKVEKLVKQLHENHNILLNPQTQLGKSRYKHNFYYQEQDEINDKKNLLAIEKICEEYGVSVNINRCNPLAGDPEDSY  201 (289)
T ss_dssp             CCHHHHHHHHHHHHHHSSCCCEEGGGTCGGGTTCCEEEECCCHHHHHHHHHHHHHHHHHHTEEEEEEECCGGGTCCTTEE
T ss_pred             CCHHHHHHHHHHHHhhhCceeeecccccccceEEEEEEeccccccchHHHHHHHHHHHHcCCCEEEEEccccccCCCCce
Confidence            4678899999888    3567788877                     556778888888987777654          4


Q ss_pred             eeccCCCCCCCCCCCCCcccccCCccccccCCCCHHHHHHHHHHhCCCCCcEEEEeCChhcHHHHHHcCCeEEEECCCCC
Q 027403          101 CFETINPRLQPADNTDGIENNSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP  180 (224)
Q Consensus       101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~~~~~~~al~~~~~~~~~~l~VgDs~~Di~~A~~~G~~~v~v~~~~~  180 (224)
                      +.+....                       ++|++..+..+++++|++|++|++|||+.+|+..++.+|+. +.+.++..
T Consensus       202 ~~~~~~~-----------------------~~~k~~~~~~~~~~~~~~~~~~~~~GDs~~D~~~~~~ag~~-~~~~~~~~  257 (289)
T 3gyg_A          202 DVDFIPI-----------------------GTGKNEIVTFMLEKYNLNTERAIAFGDSGNDVRMLQTVGNG-YLLKNATQ  257 (289)
T ss_dssp             EEEEEES-----------------------CCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHTTSSEE-EECTTCCH
T ss_pred             EEEEEeC-----------------------CCCHHHHHHHHHHHcCCChhhEEEEcCCHHHHHHHHhCCcE-EEECCccH
Confidence            4444443                       49999999999999999999999999999999999999964 55555432


Q ss_pred             --CCCCceEeCCHhH--HHHHHHHHHhh
Q 027403          181 --VPPADHALNSIHN--IKEAIPEIWEG  204 (224)
Q Consensus       181 --~~~~d~~i~~~~d--l~~~i~~~~~~  204 (224)
                        ...+++++.+..+  +.++|..++..
T Consensus       258 ~~~~~a~~v~~~~~~~gv~~~~~~~~~~  285 (289)
T 3gyg_A          258 EAKNLHNLITDSEYSKGITNTLKKLIGF  285 (289)
T ss_dssp             HHHHHCCCBCSSCHHHHHHHHHHHHTCC
T ss_pred             HHHHhCCEEcCCCCcCHHHHHHHHHHHH
Confidence              2347888888766  77777776653

>2ght_A Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1; protein-peptide complex, HAD superfamily, hydrolase; HET: SEP; 1.80A {Homo sapiens} PDB: 2ghq_A* 3pgl_A* 1t9z_A* 1ta0_A* 3l0c_A 3l0y_A 3l0b_A* 2q5e_A

Probab=98.92  E-value=8.9e-11  Score=95.87  Aligned_cols=92  Identities=15%  Similarity=0.137  Sum_probs=81.6

Q ss_pred             CCCChhHHHHHhcCC--CCeEEEeCCChHHHHHHHHHcCCccccceeEeeccCCCCCCCCCCCCCcccccCCccccccCC
Q 027403           55 LKPDPVLRNLLLSMP--QRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCK  132 (224)
Q Consensus        55 ~~~~~g~~~~L~~l~--~~~~I~Tn~~~~~~~~~l~~lgl~~~fd~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~K  132 (224)
                      +.+.||+.++|+.++  ++++|+||+++.++..+++.+++.++|+.+++.++....                       |
T Consensus        54 v~~rPg~~efL~~l~~~~~i~I~T~~~~~~a~~vl~~ld~~~~f~~~~~rd~~~~~-----------------------k  110 (181)
T 2ght_A           54 VLKRPHVDEFLQRMGELFECVLFTASLAKYADPVADLLDKWGAFRARLFRESCVFH-----------------------R  110 (181)
T ss_dssp             EEECTTHHHHHHHHHHHSEEEEECSSCHHHHHHHHHHHCTTCCEEEEECGGGSEEE-----------------------T
T ss_pred             EEeCCCHHHHHHHHHhCCCEEEEcCCCHHHHHHHHHHHCCCCcEEEEEeccCceec-----------------------C
Confidence            567999999999997  899999999999999999999999999999988776431                       2


Q ss_pred             CCHHHHHHHHHHhCCCCCcEEEEeCChhcHHHHHHcCCeE
Q 027403          133 PSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHT  172 (224)
Q Consensus       133 P~~~~~~~al~~~~~~~~~~l~VgDs~~Di~~A~~~G~~~  172 (224)
                         ..|...++.+|.++++|++|||+..++.++.++|+..
T Consensus       111 ---~~~~k~L~~Lg~~~~~~vivdDs~~~~~~~~~ngi~i  147 (181)
T 2ght_A          111 ---GNYVKDLSRLGRDLRRVLILDNSPASYVFHPDNAVPV  147 (181)
T ss_dssp             ---TEEECCGGGTCSCGGGEEEECSCGGGGTTCTTSBCCC
T ss_pred             ---CcEeccHHHhCCCcceEEEEeCCHHHhccCcCCEeEe
Confidence               4567788899999999999999999999999999984

>3kc2_A Uncharacterized protein YKR070W; HAD-like, mitochondral protein, PSI, MCSG, structural genomi protein structure initiative; HET: MSE; 1.55A {Saccharomyces cerevisiae} PDB: 3rf6_A*

Probab=98.80  E-value=1.2e-08  Score=91.58  Aligned_cols=73  Identities=16%  Similarity=0.165  Sum_probs=61.7

Q ss_pred             cccCCCCHHHHHHHHHHhC----------------------C-----CCCcEEEEeCCh-hcHHHHHHcCCeEEEECCCC
Q 027403          128 RILCKPSLEAIETAIRIAN----------------------V-----DPKKTIFFDDSA-RNIASAKAAGLHTVIVGSSV  179 (224)
Q Consensus       128 ~~~~KP~~~~~~~al~~~~----------------------~-----~~~~~l~VgDs~-~Di~~A~~~G~~~v~v~~~~  179 (224)
                      ...|||++.+|+.+.+.++                      +     ++++++||||+. .||.+|+++|+++++|.+|.
T Consensus       242 ~~~GKP~~~~y~~A~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~VGD~~~~Di~~A~~aG~~ti~V~~G~  321 (352)
T 3kc2_A          242 YTLGKPTKLTYDFAHHVLIDWEKRLSGKIGQSVKQKLPLLGTKPSTSPFHAVFMVGDNPASDIIGAQNYGWNSCLVKTGV  321 (352)
T ss_dssp             EECSTTCHHHHHHHHHHHHHHHHHHHC--------------CCTTTTTSSEEEEEESCTTTHHHHHHHHTCEEEECSSSS
T ss_pred             eEecCCCHHHHHHHHHHHHHHHHhhhcccccccccccccccccccCCCcceEEEEecCcHHHHHHHHHcCCEEEEEccCC
Confidence            5688999999999877652                      2     679999999999 59999999999999999875


Q ss_pred             C-------CCCCceEeCCHhHHHHHHHH
Q 027403          180 P-------VPPADHALNSIHNIKEAIPE  200 (224)
Q Consensus       180 ~-------~~~~d~~i~~~~dl~~~i~~  200 (224)
                      .       ...++++++++.++.+++.+
T Consensus       322 ~~~~~~~~~~~pd~vi~~l~el~~~il~  349 (352)
T 3kc2_A          322 YNEGDDLKECKPTLIVNDVFDAVTKTLE  349 (352)
T ss_dssp             CCTTCCCTTCCCSEECSSHHHHHHHHHH
T ss_pred             CCcccccccCCCCEEECCHHHHHHHHHH
Confidence            2       34589999999999987754

>1wr8_A Phosphoglycolate phosphatase; alpha / beta core domain, HAD superfamily, structural genomi structural genomics/proteomics initiative, RSGI; 1.60A {Pyrococcus horikoshii} SCOP: c.108.1.10

Probab=98.78  E-value=2.7e-08  Score=82.78  Aligned_cols=109  Identities=18%  Similarity=0.163  Sum_probs=81.4

Q ss_pred             EEEe-CCChHHHHHHHHHcCCccccceeEeeccCCCCCCCCCCCCCcccccCCccccccCCCCHHHHHHHHHHhCCCCCc
Q 027403           73 IIFT-NADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCKPSLEAIETAIRIANVDPKK  151 (224)
Q Consensus        73 ~I~T-n~~~~~~~~~l~~lgl~~~fd~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~~~~~~~al~~~~~~~~~  151 (224)
                      +++| +.+...+...++.++  +.|+.+ ++....                   .....+||++..+..+++++|+++++
T Consensus       114 ~~~~~~~~~~~~~~~~~~~~--~~~~~~-~~~~~~-------------------ei~~~~~~K~~~~~~~~~~~~~~~~~  171 (231)
T 1wr8_A          114 VIMRETINVETVREIINELN--LNLVAV-DSGFAI-------------------HVKKPWINKGSGIEKASEFLGIKPKE  171 (231)
T ss_dssp             EECTTTSCHHHHHHHHHHTT--CSCEEE-ECSSCE-------------------EEECTTCCHHHHHHHHHHHHTSCGGG
T ss_pred             EEECCCCCHHHHHHHHHhcC--CcEEEE-ecCcEE-------------------EEecCCCChHHHHHHHHHHcCCCHHH
Confidence            5666 557777888888865  556655 332100                   01112599999999999999999999


Q ss_pred             EEEEeCChhcHHHHHHcCCeEEEECCCCC--CCCCceEeCCHhH--HHHHHHHHHhh
Q 027403          152 TIFFDDSARNIASAKAAGLHTVIVGSSVP--VPPADHALNSIHN--IKEAIPEIWEG  204 (224)
Q Consensus       152 ~l~VgDs~~Di~~A~~~G~~~v~v~~~~~--~~~~d~~i~~~~d--l~~~i~~~~~~  204 (224)
                      +++|||+.+|+..++.+|+. +.+.++..  ...+++++.+..+  +.++|..++..
T Consensus       172 ~~~iGD~~nD~~~~~~ag~~-v~~~~~~~~~~~~a~~v~~~~~e~Gv~~~l~~~~~~  227 (231)
T 1wr8_A          172 VAHVGDGENDLDAFKVVGYK-VAVAQAPKILKENADYVTKKEYGEGGAEAIYHILEK  227 (231)
T ss_dssp             EEEEECSGGGHHHHHHSSEE-EECTTSCHHHHTTCSEECSSCHHHHHHHHHHHHHHH
T ss_pred             EEEECCCHHHHHHHHHcCCe-EEecCCCHHHHhhCCEEecCCCcchHHHHHHHHHHh
Confidence            99999999999999999997 66766543  3468999988776  77777776643

>2jc9_A Cytosolic purine 5'-nucleotidase; cytosolic 5-prime nucleotidase II, GMP-IMP specific nucleotidase, CN-II, NT5C2, hydrolase, polymorphism; HET: ADN; 1.5A {Homo sapiens} PDB: 2j2c_A* 2xje_A* 2xjf_A* 2jcm_A* 2xcw_A* 2xcv_A* 2xcx_A 2xjb_A* 2xjc_A* 2xjd_A*

Probab=98.67  E-value=2.9e-08  Score=93.53  Aligned_cols=122  Identities=16%  Similarity=0.109  Sum_probs=80.3

Q ss_pred             CCCChhHHHHHhcCC--CCeEEEeCCChHHHHHHHHHc-CC-------------ccccceeEeeccCCCCCC-CCCCCCC
Q 027403           55 LKPDPVLRNLLLSMP--QRKIIFTNADQKHAMEVLGRL-GL-------------EDCFEGIICFETINPRLQ-PADNTDG  117 (224)
Q Consensus        55 ~~~~~g~~~~L~~l~--~~~~I~Tn~~~~~~~~~l~~l-gl-------------~~~fd~ii~~~~~~~~~~-~~~~~~~  117 (224)
                      +.+.|++..+|++|+  .+++++||++...+....+.+ |+             .++||.||+...-+..-. .+-.+..
T Consensus       245 v~kdp~l~~~L~~Lr~~GKlfLiTNS~~~yv~~~m~yllg~~~~~~~~~~~~dWrdlFD~vI~~A~KP~FF~~~~pfr~V  324 (555)
T 2jc9_A          245 VVKDGKLPLLLSRMKEVGKVFLATNSDYKYTDKIMTYLFDFPHGPKPGSSHRPWQSYFDLILVDARKPLFFGEGTVLRQV  324 (555)
T ss_dssp             BCCCTHHHHHHHHHHHHSEEEEECSSCHHHHHHHHHHHTCSSSSSSTTSCCCCGGGGCSEEEESCCTTGGGTTCCCEEEE
T ss_pred             cCCChHHHHHHHHHHHcCCEEEEeCCChHHHHHHHHHhcCCCccccccccccchhhhCCEEEEeCCCCCcccCCCcceEe
Confidence            556789999999996  578999999999999999887 63             468998776543221100 0000000


Q ss_pred             cccccCCcc---ccccCCCCHHH-----HHHHHHHhCCCCCcEEEEeCCh-hcHHHHH-HcCCeEEEECCC
Q 027403          118 IENNSFSSN---QRILCKPSLEA-----IETAIRIANVDPKKTIFFDDSA-RNIASAK-AAGLHTVIVGSS  178 (224)
Q Consensus       118 ~~~~~~~~~---~~~~~KP~~~~-----~~~al~~~~~~~~~~l~VgDs~-~Di~~A~-~~G~~~v~v~~~  178 (224)
                        +..++..   .....-.+..+     +..+++.+|+.+++|+||||+. .||..++ .+||+|+.|..-
T Consensus       325 --d~~tg~l~~~~~~~~l~~g~vY~gGn~~~~~~llg~~g~eVLYVGDhIftDIl~~kk~~GWrTiLViPE  393 (555)
T 2jc9_A          325 --DTKTGKLKIGTYTGPLQHGIVYSGGSSDTICDLLGAKGKDILYIGDHIFGDILKSKKRQGWRTFLVIPE  393 (555)
T ss_dssp             --ETTTTEECSSCCCSCCCTTCCEEECCHHHHHHHHTCCGGGEEEEESCCCCCCHHHHHHHCCEEEEECTT
T ss_pred             --ecCCCccccccccccccCCceeccCCHHHHHHHhCCCCCeEEEECCEehHhHHhHHhhcCeEEEEEEec
Confidence              0000000   00000111122     4899999999999999999998 6999997 899999999653

>1rlm_A Phosphatase; HAD family, rossman fold, hydrolase; 1.90A {Escherichia coli} SCOP: c.108.1.10 PDB: 1rlt_A 1rlo_A* 2hf2_A

Probab=98.63  E-value=6.6e-08  Score=82.18  Aligned_cols=74  Identities=14%  Similarity=0.178  Sum_probs=61.5

Q ss_pred             CCCCHHHHHHHHHHhCCCCCcEEEEeCChhcHHHHHHcCCeEEEECCCCC--CCCCceEeCCHhH--HHHHHHHHHhhc
Q 027403          131 CKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP--VPPADHALNSIHN--IKEAIPEIWEGE  205 (224)
Q Consensus       131 ~KP~~~~~~~al~~~~~~~~~~l~VgDs~~Di~~A~~~G~~~v~v~~~~~--~~~~d~~i~~~~d--l~~~i~~~~~~~  205 (224)
                      ++|++..+..+++.+|+++++|++|||+.||+..++.+|+. +.+.++..  ...+++++.+..+  +.++|..++...
T Consensus       189 ~~~K~~~~~~l~~~l~i~~~~~~~~GD~~nD~~m~~~ag~~-va~~na~~~~k~~a~~v~~~~~~dGVa~~l~~~~~~~  266 (271)
T 1rlm_A          189 GLHKANGISRLLKRWDLSPQNVVAIGDSGNDAEMLKMARYS-FAMGNAAENIKQIARYATDDNNHEGALNVIQAVLDNT  266 (271)
T ss_dssp             TCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHCSEE-EECTTCCHHHHHHCSEECCCGGGTHHHHHHHHHHHTC
T ss_pred             CCChHHHHHHHHHHhCCCHHHEEEECCcHHHHHHHHHcCCe-EEeCCccHHHHHhCCeeCcCCCCChHHHHHHHHHhhc
Confidence            49999999999999999999999999999999999999995 55665543  2348899888766  888888777543

>2i33_A Acid phosphatase; HAD superfamily, hydrolase; 1.57A {Bacillus anthracis} PDB: 2i34_A

Probab=98.60  E-value=1.9e-08  Score=86.48  Aligned_cols=95  Identities=12%  Similarity=0.103  Sum_probs=72.5

Q ss_pred             CCCChhHHHHHhcCC---CCeEEEeCCC---hHHHHHHHHHcCCc--cccceeEeeccCCCCCCCCCCCCCcccccCCcc
Q 027403           55 LKPDPVLRNLLLSMP---QRKIIFTNAD---QKHAMEVLGRLGLE--DCFEGIICFETINPRLQPADNTDGIENNSFSSN  126 (224)
Q Consensus        55 ~~~~~g~~~~L~~l~---~~~~I~Tn~~---~~~~~~~l~~lgl~--~~fd~ii~~~~~~~~~~~~~~~~~~~~~~~~~~  126 (224)
                      ..++||+.++|+.|+   .+++|+||++   ...+...|+.+|+.  .+|+.+++.++.  .                  
T Consensus       100 ~~~~pg~~e~L~~L~~~Gi~i~iaTnr~~~~~~~~~~~L~~~Gl~~v~~~~vi~~~~~~--~------------------  159 (258)
T 2i33_A          100 AEALPGSIDFLKYTESKGVDIYYISNRKTNQLDATIKNLERVGAPQATKEHILLQDPKE--K------------------  159 (258)
T ss_dssp             CEECTTHHHHHHHHHHTTCEEEEEEEEEGGGHHHHHHHHHHHTCSSCSTTTEEEECTTC--C------------------
T ss_pred             CCcCccHHHHHHHHHHCCCEEEEEcCCchhHHHHHHHHHHHcCCCcCCCceEEECCCCC--C------------------
Confidence            578999999999986   6789999998   56778888999998  677776665542  1                  


Q ss_pred             ccccCCCCHHHHHHHHHHhCCCCCcEEEEeCChhcHHHHH-------H---------cCCeEEEECCCC
Q 027403          127 QRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAK-------A---------AGLHTVIVGSSV  179 (224)
Q Consensus       127 ~~~~~KP~~~~~~~al~~~~~~~~~~l~VgDs~~Di~~A~-------~---------~G~~~v~v~~~~  179 (224)
                           ||.+.  ..++ ..+  ...|+||||+.+|+.+|.       +         +|++++.++++.
T Consensus       160 -----K~~~~--~~~~-~~~--~~~~l~VGDs~~Di~aA~~~~~~~r~a~v~~~~~~aG~~~i~lpn~~  218 (258)
T 2i33_A          160 -----GKEKR--RELV-SQT--HDIVLFFGDNLSDFTGFDGKSVKDRNQAVTDSKAQFGEKFIIFPNPM  218 (258)
T ss_dssp             -----SSHHH--HHHH-HHH--EEEEEEEESSGGGSTTCSSCCHHHHHHHHHHTGGGBTTTEEECCCCS
T ss_pred             -----CcHHH--HHHH-HhC--CCceEEeCCCHHHhcccccCCHHHHHHHHHHHHHHhcCceEECCCCC
Confidence                 66553  2222 333  244999999999999993       4         799999998874

>2rbk_A Putative uncharacterized protein; HAD-like phosphatase, unknown function; 1.00A {Bacteroides thetaiotaomicron} SCOP: c.108.1.10 PDB: 1ymq_A 2rb5_A 2rav_A 2rar_A

Probab=98.57  E-value=1e-07  Score=80.32  Aligned_cols=73  Identities=21%  Similarity=0.297  Sum_probs=60.6

Q ss_pred             cccCCCCHHHHHHHHHHhCCCCCcEEEEeCChhcHHHHHHcCCeEEEECCCCC--CCCCceEeCCHhH--HHHHHHHH
Q 027403          128 RILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP--VPPADHALNSIHN--IKEAIPEI  201 (224)
Q Consensus       128 ~~~~KP~~~~~~~al~~~~~~~~~~l~VgDs~~Di~~A~~~G~~~v~v~~~~~--~~~~d~~i~~~~d--l~~~i~~~  201 (224)
                      ...++|++..+..+++.+|+++++|++|||+.+|+..++.+|+. +.+.++..  ...+++++.+..+  +.++|..+
T Consensus       182 ~~~~~~K~~~~~~~~~~~~~~~~~~~~iGD~~nD~~~~~~ag~~-v~~~n~~~~~~~~a~~v~~~~~~dGv~~~l~~~  258 (261)
T 2rbk_A          182 TAKGDTKQKGIDEIIRHFGIKLEETMSFGDGGNDISMLRHAAIG-VAMGQAKEDVKAAADYVTAPIDEDGISKAMKHF  258 (261)
T ss_dssp             ESTTCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEE-EECTTSCHHHHHHSSEECCCGGGTHHHHHHHHH
T ss_pred             cCCCCChHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHcCce-EEecCccHHHHhhCCEEeccCchhhHHHHHHHh
Confidence            44579999999999999999999999999999999999999985 44444332  2348999999999  88877653

>4dw8_A Haloacid dehalogenase-like hydrolase; HAD, putative phosphatase, enzyme function initiative, EFI, structural genomics; 1.50A {Bacteroides thetaiotaomicron} PDB: 3niw_A 4dwo_A

Probab=98.51  E-value=3.5e-07  Score=77.27  Aligned_cols=76  Identities=20%  Similarity=0.246  Sum_probs=60.0

Q ss_pred             CCCCHHHHHHHHHHhCCCCCcEEEEeCChhcHHHHHHcCCeEEEECCCCC--CCCCceEeCCHhH--HHHHHHHHHhhcC
Q 027403          131 CKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP--VPPADHALNSIHN--IKEAIPEIWEGEG  206 (224)
Q Consensus       131 ~KP~~~~~~~al~~~~~~~~~~l~VgDs~~Di~~A~~~G~~~v~v~~~~~--~~~~d~~i~~~~d--l~~~i~~~~~~~~  206 (224)
                      +++++..+..+++.+|+++++|++|||+.||+..++.+|+ .+.++++.+  ...+++++.+..+  +.++|..++..+|
T Consensus       195 ~~~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag~-~vam~na~~~~k~~A~~v~~~~~e~Gv~~~i~~~~~~~~  273 (279)
T 4dw8_A          195 GIDKALSLSVLLENIGMTREEVIAIGDGYNDLSMIKFAGM-GVAMGNAQEPVKKAADYITLTNDEDGVAEAIERIFNVEG  273 (279)
T ss_dssp             TCCHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSE-EEECTTSCHHHHHHCSEECCCGGGTHHHHHHHHHC----
T ss_pred             CCChHHHHHHHHHHcCCCHHHEEEECCChhhHHHHHHcCc-EEEcCCCcHHHHHhCCEEcCCCCCcHHHHHHHHHHhccc
Confidence            4788999999999999999999999999999999999995 355555433  3348999887665  9999999999888


Q ss_pred             c
Q 027403          207 E  207 (224)
Q Consensus       207 ~  207 (224)
                      |
T Consensus       274 ~  274 (279)
T 4dw8_A          274 H  274 (279)
T ss_dssp             -
T ss_pred             c
Confidence            7

>3dnp_A Stress response protein YHAX; structural PSI-2, protein structure initiative, midwest center for STR genomics, MCSG, unknown function; HET: MSE; 1.85A {Bacillus subtilis} SCOP: c.108.1.0

Probab=98.39  E-value=4.2e-07  Score=77.23  Aligned_cols=73  Identities=15%  Similarity=0.178  Sum_probs=62.7

Q ss_pred             CCCCHHHHHHHHHHhCCCCCcEEEEeCChhcHHHHHHcCCeEEEECCCCC--CCCCceEeCCHhH--HHHHHHHHHhh
Q 027403          131 CKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP--VPPADHALNSIHN--IKEAIPEIWEG  204 (224)
Q Consensus       131 ~KP~~~~~~~al~~~~~~~~~~l~VgDs~~Di~~A~~~G~~~v~v~~~~~--~~~~d~~i~~~~d--l~~~i~~~~~~  204 (224)
                      +.+++..+..+++.+|+++++|++|||+.||+..++.+|+. +.+.++.+  ...++++..+..+  +.++|..++..
T Consensus       200 ~~~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag~~-vam~na~~~~k~~Ad~v~~s~~edGv~~~i~~~~~~  276 (290)
T 3dnp_A          200 GVSKEAGLALVASELGLSMDDVVAIGHQYDDLPMIELAGLG-VAMGNAVPEIKRKADWVTRSNDEQGVAYMMKEYFRM  276 (290)
T ss_dssp             TCCHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEE-EECTTSCHHHHHHSSEECCCTTTTHHHHHHHHHHHH
T ss_pred             CCCHHHHHHHHHHHcCCCHHHEEEECCchhhHHHHHhcCCE-EEecCCcHHHHHhcCEECCCCCccHHHHHHHHHHHh
Confidence            48899999999999999999999999999999999999974 55555543  4458999998888  99999888765

>1l6r_A Hypothetical protein TA0175; structural genomics, putative hydrolas midwest center for structural genomics, MCSG, PSI; 1.40A {Thermoplasma acidophilum} SCOP: c.108.1.10 PDB: 1kyt_A

Probab=98.29  E-value=1.1e-06  Score=73.27  Aligned_cols=141  Identities=8%  Similarity=-0.013  Sum_probs=91.3

Q ss_pred             CCChhHHHHHhcCC---CCeEEEeCCChHHHHHHHHHcCCccccceeEeec-c-CCCCCCCCCC----------------
Q 027403           56 KPDPVLRNLLLSMP---QRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFE-T-INPRLQPADN----------------  114 (224)
Q Consensus        56 ~~~~g~~~~L~~l~---~~~~I~Tn~~~~~~~~~l~~lgl~~~fd~ii~~~-~-~~~~~~~~~~----------------  114 (224)
                      .+.+...++|++|+   .+++++|+++...+...++.+|+..+   +|+.. . +... ....+                
T Consensus        22 ~i~~~~~~~l~~l~~~g~~~~i~TGr~~~~~~~~~~~l~~~~~---~I~~NGa~i~~~-~~~~i~~~~~l~~~~~i~~~~   97 (227)
T 1l6r_A           22 LISTKAIESIRSAEKKGLTVSLLSGNVIPVVYALKIFLGINGP---VFGENGGIMFDN-DGSIKKFFSNEGTNKFLEEMS   97 (227)
T ss_dssp             CBCHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCCSC---EEEGGGTEEECT-TSCEEESSCSHHHHHHHHHHT
T ss_pred             cCCHHHHHHHHHHHHCCCEEEEECCCCcHHHHHHHHHhCCCCe---EEEeCCcEEEeC-CCCEEEEeccHHHHHHHHHHH
Confidence            45677888888885   67889999999999999999987542   22211 0 0000 00000                


Q ss_pred             --C--CCcc---------------------------------cccCCccccccCCCCHHHHHHHHHHhCCCCCcEEEEeC
Q 027403          115 --T--DGIE---------------------------------NNSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDD  157 (224)
Q Consensus       115 --~--~~~~---------------------------------~~~~~~~~~~~~KP~~~~~~~al~~~~~~~~~~l~VgD  157 (224)
                        +  +..+                                 .....-+..+.+.++......+++.++++++++++|||
T Consensus        98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ei~~~~~~K~~~l~~l~~~~~~~~~~~~~iGD  177 (227)
T 1l6r_A           98 KRTSMRSILTNRWREASTGFDIDPEDVDYVRKEAESRGFVIFYSGYSWHLMNRGEDKAFAVNKLKEMYSLEYDEILVIGD  177 (227)
T ss_dssp             TTSSCBCCGGGGGCSSSEEEBCCGGGHHHHHHHHHTTTEEEEEETTEEEEEETTCSHHHHHHHHHHHTTCCGGGEEEECC
T ss_pred             HHhcCCccccccceecccceEEecCCHHHHHHHHHhcCEEEEecCcEEEEecCCCCHHHHHHHHHHHhCcCHHHEEEECC
Confidence              0  0000                                 00000011244578899999999999999999999999


Q ss_pred             ChhcHHHHHHcCCeEEEECCCCC--CCCCceEeCCHhH--HHHHHHHH
Q 027403          158 SARNIASAKAAGLHTVIVGSSVP--VPPADHALNSIHN--IKEAIPEI  201 (224)
Q Consensus       158 s~~Di~~A~~~G~~~v~v~~~~~--~~~~d~~i~~~~d--l~~~i~~~  201 (224)
                      +.||+..++.+|+. +.+.++..  ...+++++.+..+  +.++|..+
T Consensus       178 ~~nD~~m~~~ag~~-va~~n~~~~~k~~a~~v~~~~~~~Gv~~~l~~~  224 (227)
T 1l6r_A          178 SNNDMPMFQLPVRK-ACPANATDNIKAVSDFVSDYSYGEEIGQIFKHF  224 (227)
T ss_dssp             SGGGHHHHTSSSEE-EECTTSCHHHHHHCSEECSCCTTHHHHHHHHHT
T ss_pred             cHHhHHHHHHcCce-EEecCchHHHHHhCCEEecCCCCcHHHHHHHHH
Confidence            99999999999985 66665543  2347888876533  55555443

>3mpo_A Predicted hydrolase of the HAD superfamily; SGX, PSI, structural genomics, protein structure initiative; 2.90A {Lactobacillus brevis} SCOP: c.108.1.0

Probab=98.25  E-value=1.9e-07  Score=78.95  Aligned_cols=76  Identities=16%  Similarity=0.204  Sum_probs=49.0

Q ss_pred             CCCCHHHHHHHHHHhCCCCCcEEEEeCChhcHHHHHHcCCeEEEECCCCC--CCCCceEeCCHhH--HHHHHHHHHhhcC
Q 027403          131 CKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP--VPPADHALNSIHN--IKEAIPEIWEGEG  206 (224)
Q Consensus       131 ~KP~~~~~~~al~~~~~~~~~~l~VgDs~~Di~~A~~~G~~~v~v~~~~~--~~~~d~~i~~~~d--l~~~i~~~~~~~~  206 (224)
                      +..++..+..+++.+|+++++|++|||+.||+..++.+|+. +.+.++.+  ...++++..+..+  +.++|..++..+|
T Consensus       195 ~~~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag~~-vam~na~~~~k~~A~~v~~~~~e~Gv~~~i~~~~~~~~  273 (279)
T 3mpo_A          195 RASKGGTLSELVDQLGLTADDVMTLGDQGNDLTMIKYAGLG-VAMGNAIDEVKEAAQAVTLTNAENGVAAAIRKYALNEG  273 (279)
T ss_dssp             SCCHHHHHHHHHHHTTCCGGGEEEC--CCTTHHHHHHSTEE-CBC---CCHHHHHCSCBC------CHHHHHC-------
T ss_pred             CCChHHHHHHHHHHcCCCHHHEEEECCchhhHHHHHhcCce-eeccCCCHHHHHhcceeccCCCccHHHHHHHHHhcccC
Confidence            35589999999999999999999999999999999999964 44444443  3447888777554  8899999988888


Q ss_pred             c
Q 027403          207 E  207 (224)
Q Consensus       207 ~  207 (224)
                      |
T Consensus       274 ~  274 (279)
T 3mpo_A          274 H  274 (279)
T ss_dssp             -
T ss_pred             c
Confidence            7

>3fzq_A Putative hydrolase; YP_001086940.1, putative haloacid dehalogenase-like hydrolas structural genomics, joint center for structural genomics; HET: MSE; 2.10A {Clostridium difficile} SCOP: c.108.1.0

Probab=98.23  E-value=4.2e-06  Score=70.04  Aligned_cols=68  Identities=21%  Similarity=0.183  Sum_probs=54.6

Q ss_pred             CCCCHHHHHHHHHHhCCCCCcEEEEeCChhcHHHHHHcCCeEEEECCCCC--CCCCceEeCCHhH--HHHHHH
Q 027403          131 CKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP--VPPADHALNSIHN--IKEAIP  199 (224)
Q Consensus       131 ~KP~~~~~~~al~~~~~~~~~~l~VgDs~~Di~~A~~~G~~~v~v~~~~~--~~~~d~~i~~~~d--l~~~i~  199 (224)
                      +++++..+..+++.+|++++++++|||+.||+..++.+|+. +.+.++.+  ...+++++.+..+  +.++|.
T Consensus       198 ~~~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag~~-vam~na~~~~k~~A~~v~~~~~edGv~~~l~  269 (274)
T 3fzq_A          198 DFHKGKAIKRLQERLGVTQKETICFGDGQNDIVMFQASDVT-IAMKNSHQQLKDIATSICEDIFDNGIYKELK  269 (274)
T ss_dssp             TCSHHHHHHHHHHHHTCCSTTEEEECCSGGGHHHHHTCSEE-EEETTSCHHHHHHCSEEECCGGGTHHHHHHH
T ss_pred             CCCHHHHHHHHHHHcCCCHHHEEEECCChhHHHHHHhcCce-EEecCccHHHHHhhhheeCCCchhHHHHHHH
Confidence            58999999999999999999999999999999999999953 55555443  3447888887664  454444

>3l7y_A Putative uncharacterized protein SMU.1108C; hydrolase; 2.00A {Streptococcus mutans}

Probab=98.22  E-value=3.1e-06  Score=72.93  Aligned_cols=73  Identities=14%  Similarity=0.110  Sum_probs=61.5

Q ss_pred             CCCCHHHHHHHHHHhCCCCCcEEEEeCChhcHHHHHHcCCeEEEECCCCC--CCCCceEeCCHhH--HHHHHHHHHhh
Q 027403          131 CKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP--VPPADHALNSIHN--IKEAIPEIWEG  204 (224)
Q Consensus       131 ~KP~~~~~~~al~~~~~~~~~~l~VgDs~~Di~~A~~~G~~~v~v~~~~~--~~~~d~~i~~~~d--l~~~i~~~~~~  204 (224)
                      +.++......+++.+|+++++|++|||+.||+..++.+|+. +.+.++.+  ...+++++.+..+  +.++|..++..
T Consensus       226 ~~~K~~al~~l~~~lgi~~~e~i~~GDs~NDi~m~~~ag~~-vam~na~~~~k~~Ad~v~~~~~edGv~~~l~~~~~~  302 (304)
T 3l7y_A          226 GLHKGWALQQLLKRWNFTSDHLMAFGDGGNDIEMLKLAKYS-YAMANAPKNVKAAANYQAKSNDESGVLDVIDNYLAS  302 (304)
T ss_dssp             TCSHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHCTEE-EECTTSCHHHHHHCSEECCCGGGTHHHHHHHHHHHC
T ss_pred             CCCHHHHHHHHHHHhCcCHHHEEEECCCHHHHHHHHhcCCe-EEcCCcCHHHHHhccEEcCCCCcchHHHHHHHHHHh
Confidence            47789999999999999999999999999999999999964 55655543  3458999999888  88888887753

>3pct_A Class C acid phosphatase; hydrolase, outer membrane; 1.85A {Pasteurella multocida}

Probab=98.20  E-value=5.6e-07  Score=77.64  Aligned_cols=97  Identities=10%  Similarity=0.158  Sum_probs=69.6

Q ss_pred             CCCCHHHHHHHHhccCCCCCCCCChhHHHHHhcCC---CCeEEEeCCCh----HHHHHHHHHcCCccccc-eeEeeccCC
Q 027403           35 YEFDNDEFHAFVHGKLPYEKLKPDPVLRNLLLSMP---QRKIIFTNADQ----KHAMEVLGRLGLEDCFE-GIICFETIN  106 (224)
Q Consensus        35 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~L~~l~---~~~~I~Tn~~~----~~~~~~l~~lgl~~~fd-~ii~~~~~~  106 (224)
                      ..++...+.+.+..    ...+++||+.++|+.|+   .+++|+||++.    ..+...|+.+|+..+++ .++....  
T Consensus        84 ~~f~~~~w~~wv~~----g~~~~~pg~~ell~~L~~~G~~i~ivTgR~~~~~r~~T~~~L~~lGi~~~~~~~Lilr~~--  157 (260)
T 3pct_A           84 QGFSPKTWTKWVDA----RQSAAIPGAVEFSNYVNANGGTMFFVSNRRDDVEKAGTVDDMKRLGFTGVNDKTLLLKKD--  157 (260)
T ss_dssp             CCCCHHHHHHHHHT----TCCEECTTHHHHHHHHHHTTCEEEEEEEEETTTSHHHHHHHHHHHTCCCCSTTTEEEESS--
T ss_pred             CCCCHHHHHHHHHc----CCCCCCccHHHHHHHHHHCCCeEEEEeCCCccccHHHHHHHHHHcCcCccccceeEecCC--
Confidence            45566666666554    34689999999999885   78999999865    58899999999987775 4554432  


Q ss_pred             CCCCCCCCCCCcccccCCccccccCCCCHHHHHHHHHHhCCCCCcEEEEeCChhcHHH
Q 027403          107 PRLQPADNTDGIENNSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIAS  164 (224)
Q Consensus       107 ~~~~~~~~~~~~~~~~~~~~~~~~~KP~~~~~~~al~~~~~~~~~~l~VgDs~~Di~~  164 (224)
                                               ++.+......+.+.+.  +-+++|||+.+|+.+
T Consensus       158 -------------------------~~~K~~~r~~L~~~gy--~iv~~iGD~~~Dl~~  188 (260)
T 3pct_A          158 -------------------------KSNKSVRFKQVEDMGY--DIVLFVGDNLNDFGD  188 (260)
T ss_dssp             -------------------------CSSSHHHHHHHHTTTC--EEEEEEESSGGGGCG
T ss_pred             -------------------------CCChHHHHHHHHhcCC--CEEEEECCChHHcCc
Confidence                                     2233444444444453  449999999999998

>3ocu_A Lipoprotein E; hydrolase, outer membrane; HET: NMN; 1.35A {Haemophilus influenzae} PDB: 3ocv_A* 3ocw_A* 3ocx_A* 3ocz_A* 3ocy_A* 3sf0_A* 2hlk_A 2hll_A 3et4_A 3et5_A

Probab=98.12  E-value=7.3e-07  Score=77.02  Aligned_cols=97  Identities=11%  Similarity=0.184  Sum_probs=68.9

Q ss_pred             CCCCHHHHHHHHhccCCCCCCCCChhHHHHHhcCC---CCeEEEeCCCh----HHHHHHHHHcCCccccc-eeEeeccCC
Q 027403           35 YEFDNDEFHAFVHGKLPYEKLKPDPVLRNLLLSMP---QRKIIFTNADQ----KHAMEVLGRLGLEDCFE-GIICFETIN  106 (224)
Q Consensus        35 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~L~~l~---~~~~I~Tn~~~----~~~~~~l~~lgl~~~fd-~ii~~~~~~  106 (224)
                      ..++...+.+.+..    ...+++||+.++|+.|+   .+++|+||++.    ..+...|+++|+..+++ .++..... 
T Consensus        84 ~~f~~~~w~~wv~~----~~~~~~pG~~ell~~L~~~G~ki~ivTgR~~~~~r~~T~~~L~~lGi~~~~~~~Lilr~~~-  158 (262)
T 3ocu_A           84 KPFDGKDWTRWVDA----RQSRAVPGAVEFNNYVNSHNGKVFYVTNRKDSTEKSGTIDDMKRLGFNGVEESAFYLKKDK-  158 (262)
T ss_dssp             CCCCHHHHHHHHHH----TCCEECTTHHHHHHHHHHTTEEEEEEEEEETTTTHHHHHHHHHHHTCSCCSGGGEEEESSC-
T ss_pred             ccCCHHHHHHHHHc----CCCCCCccHHHHHHHHHHCCCeEEEEeCCCccchHHHHHHHHHHcCcCcccccceeccCCC-
Confidence            44566556655554    34689999999999886   67889999865    58889999999987664 56654331 


Q ss_pred             CCCCCCCCCCCcccccCCccccccCCCCHHHHHHHHHHhCCCCCcEEEEeCChhcHHH
Q 027403          107 PRLQPADNTDGIENNSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIAS  164 (224)
Q Consensus       107 ~~~~~~~~~~~~~~~~~~~~~~~~~KP~~~~~~~al~~~~~~~~~~l~VgDs~~Di~~  164 (224)
                                               ..+...+..+. +.|.  .-+++|||..+|+.+
T Consensus       159 -------------------------~~K~~~r~~l~-~~Gy--~iv~~vGD~~~Dl~~  188 (262)
T 3ocu_A          159 -------------------------SAKAARFAEIE-KQGY--EIVLYVGDNLDDFGN  188 (262)
T ss_dssp             -------------------------SCCHHHHHHHH-HTTE--EEEEEEESSGGGGCS
T ss_pred             -------------------------CChHHHHHHHH-hcCC--CEEEEECCChHHhcc
Confidence                                     23444554444 4454  349999999999998

>3dao_A Putative phosphatse; structural genomics, joint center for S genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: MSE 1PE CIT; 1.80A {Eubacterium rectale}

Probab=98.07  E-value=1.8e-06  Score=73.67  Aligned_cols=70  Identities=16%  Similarity=0.250  Sum_probs=58.6

Q ss_pred             CCCCHHHHHHHHHHhCCCCCcEEEEeCChhcHHHHHHcCCeEEEECCCCC--CCCCceEeCCHhH--HHHHHHHH
Q 027403          131 CKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP--VPPADHALNSIHN--IKEAIPEI  201 (224)
Q Consensus       131 ~KP~~~~~~~al~~~~~~~~~~l~VgDs~~Di~~A~~~G~~~v~v~~~~~--~~~~d~~i~~~~d--l~~~i~~~  201 (224)
                      +.++......+++.+|++++++++|||+.||+..++.+|+ .+.+.++.+  ...++++..+-.+  +.++|.++
T Consensus       209 ~~~K~~~l~~l~~~lgi~~~e~ia~GD~~NDi~ml~~ag~-~vam~na~~~~k~~A~~v~~s~~edGv~~~l~~~  282 (283)
T 3dao_A          209 GVSKWTALSYLIDRFDLLPDEVCCFGDNLNDIEMLQNAGI-SYAVSNARQEVIAAAKHTCAPYWENGVLSVLKSF  282 (283)
T ss_dssp             TCCHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSE-EEEETTSCHHHHHHSSEEECCGGGTHHHHHHHHT
T ss_pred             CCcHHHHHHHHHHHhCCCHHHEEEECCCHHHHHHHHhCCC-EEEcCCCCHHHHHhcCeECCCCCCChHHHHHHHh
Confidence            4778999999999999999999999999999999999996 477776654  3458999888776  77766654

>3j08_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus}

Probab=97.94  E-value=3.1e-05  Score=74.39  Aligned_cols=108  Identities=16%  Similarity=0.213  Sum_probs=81.4

Q ss_pred             CCChhHHHHHhcCC---CCeEEEeCCChHHHHHHHHHcCCccccceeEeeccCCCCCCCCCCCCCcccccCCccccccCC
Q 027403           56 KPDPVLRNLLLSMP---QRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCK  132 (224)
Q Consensus        56 ~~~~g~~~~L~~l~---~~~~I~Tn~~~~~~~~~l~~lgl~~~fd~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~K  132 (224)
                      ++.|++.+.++.|+   .+++++|+.+...+....+.+|+..+|..+      .                        ++
T Consensus       457 ~l~~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~lgi~~~~~~~------~------------------------P~  506 (645)
T 3j08_A          457 TLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLDLVIAEV------L------------------------PH  506 (645)
T ss_dssp             CCTTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCSEEECSC------C------------------------TT
T ss_pred             CchhHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCCEEEEeC------C------------------------HH
Confidence            46788999888886   778899999999999999999987544321      1                        13


Q ss_pred             CCHHHHHHHHHHhCCCCCcEEEEeCChhcHHHHHHcCCeEEEECCCCC--CCCCceEe--CCHhHHHHHHH
Q 027403          133 PSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP--VPPADHAL--NSIHNIKEAIP  199 (224)
Q Consensus       133 P~~~~~~~al~~~~~~~~~~l~VgDs~~Di~~A~~~G~~~v~v~~~~~--~~~~d~~i--~~~~dl~~~i~  199 (224)
                      .+..    ++++++.. ++++||||+.||+.+.+.+|+. +.++++..  ...+|+++  +++..+.+++.
T Consensus       507 ~K~~----~v~~l~~~-~~v~~vGDg~ND~~al~~A~vg-iamg~g~~~a~~~AD~vl~~~~~~~i~~~i~  571 (645)
T 3j08_A          507 QKSE----EVKKLQAK-EVVAFVGDGINDAPALAQADLG-IAVGSGSDVAVESGDIVLIRDDLRDVVAAIQ  571 (645)
T ss_dssp             CHHH----HHHHHTTT-CCEEEEECSSSCHHHHHHSSEE-EEECCCSCCSSCCSSSEESSCCTTHHHHHHH
T ss_pred             hHHH----HHHHHhhC-CeEEEEeCCHhHHHHHHhCCEE-EEeCCCcHHHHHhCCEEEecCCHHHHHHHHH
Confidence            3343    44444444 8899999999999999999964 56655544  55689998  78888887774

>1rkq_A Hypothetical protein YIDA; two domain structure with beta-alpha sandwich. stucture contains A magnesium ION., PSI, protein structure initiative; 1.40A {Escherichia coli} SCOP: c.108.1.10

Probab=97.83  E-value=1.4e-05  Score=68.20  Aligned_cols=76  Identities=20%  Similarity=0.259  Sum_probs=60.0

Q ss_pred             CCCCHHHHHHHHHHhCCCCCcEEEEeCChhcHHHHHHcCCeEEEECCCCC--CCCCceEeCCHhH--HHHHHHHHHhhcC
Q 027403          131 CKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP--VPPADHALNSIHN--IKEAIPEIWEGEG  206 (224)
Q Consensus       131 ~KP~~~~~~~al~~~~~~~~~~l~VgDs~~Di~~A~~~G~~~v~v~~~~~--~~~~d~~i~~~~d--l~~~i~~~~~~~~  206 (224)
                      +-+++..+..+++.+|++++++++|||+.||+..++.+|+ .+.+.++..  ...+++++.+..+  +.++|..++..++
T Consensus       196 ~~~K~~~l~~l~~~~~~~~~~~~~~GD~~nD~~m~~~ag~-~va~~n~~~~~~~~a~~v~~~~~~dGV~~~l~~~~~~~~  274 (282)
T 1rkq_A          196 RVNKGTGVKSLADVLGIKPEEIMAIGDQENDIAMIEYAGV-GVAVDNAIPSVKEVANFVTKSNLEDGVAFAIEKYVLNEG  274 (282)
T ss_dssp             TCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSE-EEECTTSCHHHHHHCSEECCCTTTTHHHHHHHHHTTC--
T ss_pred             CCCCHHHHHHHHHHhCCCHHHEEEECCcHHHHHHHHHCCc-EEEecCCcHHHHhhCCEEecCCCcchHHHHHHHHHhcCC
Confidence            4678999999999999999999999999999999999998 566665543  2348899887655  8888887765544


Q ss_pred             c
Q 027403          207 E  207 (224)
Q Consensus       207 ~  207 (224)
                      +
T Consensus       275 ~  275 (282)
T 1rkq_A          275 G  275 (282)
T ss_dssp             -
T ss_pred             C
Confidence            3

>3r4c_A Hydrolase, haloacid dehalogenase-like hydrolase; haloalkanoate dehalogenase enzyme superfamily, phosphohydrol hydrolase; 1.82A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0

Probab=97.79  E-value=2.3e-05  Score=65.55  Aligned_cols=69  Identities=19%  Similarity=0.261  Sum_probs=55.7

Q ss_pred             CCCCHHHHHHHHHHhCCCCCcEEEEeCChhcHHHHHHcCCeEEEECCCCC--CCCCceEeCCHhH--HHHHHHH
Q 027403          131 CKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP--VPPADHALNSIHN--IKEAIPE  200 (224)
Q Consensus       131 ~KP~~~~~~~al~~~~~~~~~~l~VgDs~~Di~~A~~~G~~~v~v~~~~~--~~~~d~~i~~~~d--l~~~i~~  200 (224)
                      +.++......+++.+|++++++++|||+.||+..++.+|+. +.+.++.+  ...++++..+..+  +.+.|..
T Consensus       192 ~~~K~~~l~~l~~~lgi~~~~~ia~GD~~NDi~m~~~ag~~-vam~na~~~~k~~Ad~v~~~~~edGv~~~l~~  264 (268)
T 3r4c_A          192 GTSKATGLSLFADYYRVKVSEIMACGDGGNDIPMLKAAGIG-VAMGNASEKVQSVADFVTDTVDNSGLYKALKH  264 (268)
T ss_dssp             TCCHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEE-EECTTSCHHHHHTCSEECCCTTTTHHHHHHHH
T ss_pred             CCCHHHHHHHHHHHcCCCHHHEEEECCcHHhHHHHHhCCCe-EEeCCCcHHHHHhcCEeeCCCCcCHHHHHHHH
Confidence            47889999999999999999999999999999999999975 66666544  3448898877654  5555443

>3pgv_A Haloacid dehalogenase-like hydrolase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: EPE; 2.39A {Klebsiella pneumoniae subsp}

Probab=97.78  E-value=5.1e-05  Score=64.48  Aligned_cols=71  Identities=13%  Similarity=0.166  Sum_probs=53.4

Q ss_pred             CCCCHHHHHHHHHHhCCCCCcEEEEeCChhcHHHHHHcCCeEEEECCCCC--CCCCc--eEeCCHhH--HHHHHHHHH
Q 027403          131 CKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP--VPPAD--HALNSIHN--IKEAIPEIW  202 (224)
Q Consensus       131 ~KP~~~~~~~al~~~~~~~~~~l~VgDs~~Di~~A~~~G~~~v~v~~~~~--~~~~d--~~i~~~~d--l~~~i~~~~  202 (224)
                      +.+++.....+++.+|++++++++|||+.||+..++.+|+ .+.+.++.+  ...++  ++..+-.+  +..+|.+++
T Consensus       207 ~~~K~~al~~l~~~lgi~~~~~ia~GD~~NDi~ml~~ag~-~vAm~Na~~~vk~~A~~~~v~~sn~edGva~~i~~~~  283 (285)
T 3pgv_A          207 GVSKGHALEAVAKMLGYTLSDCIAFGDGMNDAEMLSMAGK-GCIMANAHQRLKDLHPELEVIGSNADDAVPRYLRKLY  283 (285)
T ss_dssp             TCSHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSE-EEECTTSCHHHHHHCTTSEECCCGGGTHHHHHHHHHH
T ss_pred             CCChHHHHHHHHHHhCCCHHHEEEECCcHhhHHHHHhcCC-EEEccCCCHHHHHhCCCCEecccCCcchHHHHHHHHh
Confidence            4778999999999999999999999999999999999995 466666543  22244  35555433  666665543

>2pq0_A Hypothetical conserved protein GK1056; hyopthetical protein, structural genomics, unknown function; 2.60A {Geobacillus kaustophilus} PDB: 2qyh_A

Probab=97.75  E-value=4e-05  Score=63.92  Aligned_cols=70  Identities=20%  Similarity=0.229  Sum_probs=55.5

Q ss_pred             cCCCCHHHHHHHHHHhCCCCCcEEEEeCChhcHHHHHHcCCeEEEECCCCC--CCCCceEeCCHhH--HHHHHHH
Q 027403          130 LCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP--VPPADHALNSIHN--IKEAIPE  200 (224)
Q Consensus       130 ~~KP~~~~~~~al~~~~~~~~~~l~VgDs~~Di~~A~~~G~~~v~v~~~~~--~~~~d~~i~~~~d--l~~~i~~  200 (224)
                      .+-.+...+..+++.+|+++++|++|||+.||+..++.+|+. +.+.++.+  ...++++..+..+  +.++|..
T Consensus       180 ~~~~K~~~l~~l~~~lgi~~~~~ia~GDs~NDi~ml~~ag~~-vam~na~~~~k~~A~~v~~~~~~dGva~~i~~  253 (258)
T 2pq0_A          180 AGGSKAEGIRMMIEKLGIDKKDVYAFGDGLNDIEMLSFVGTG-VAMGNAHEEVKRVADFVTKPVDKEGIWYGLKQ  253 (258)
T ss_dssp             SSCCHHHHHHHHHHHHTCCGGGEEEECCSGGGHHHHHHSSEE-EEETTCCHHHHHTCSEEECCGGGTHHHHHHHH
T ss_pred             CCCChHHHHHHHHHHhCCCHHHEEEECCcHHhHHHHHhCCcE-EEeCCCcHHHHHhCCEEeCCCCcchHHHHHHH
Confidence            356678889999999999999999999999999999999995 44665443  3458999877654  5555544

>1nrw_A Hypothetical protein, haloacid dehalogenase-like hydrolase; structural genomics, PSI, protein structure initiative; 1.70A {Bacillus subtilis} SCOP: c.108.1.10

Probab=97.75  E-value=2.4e-05  Score=66.77  Aligned_cols=70  Identities=17%  Similarity=0.142  Sum_probs=55.5

Q ss_pred             cCCCCHHHHHHHHHHhCCCCCcEEEEeCChhcHHHHHHcCCeEEEECCCCC--CCCCceEeCCHhH--HHHHHHH
Q 027403          130 LCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP--VPPADHALNSIHN--IKEAIPE  200 (224)
Q Consensus       130 ~~KP~~~~~~~al~~~~~~~~~~l~VgDs~~Di~~A~~~G~~~v~v~~~~~--~~~~d~~i~~~~d--l~~~i~~  200 (224)
                      .+-.+...+..+++.+|+++++|++|||+.||+..++.+|+ ++.+.++..  ...+++++.+..+  +.++|..
T Consensus       213 ~~~~K~~~~~~~~~~~~~~~~~~~~~GD~~nD~~m~~~ag~-~va~~~~~~~~~~~a~~v~~~~~~dGVa~~i~~  286 (288)
T 1nrw_A          213 RKASKGQALKRLAKQLNIPLEETAAVGDSLNDKSMLEAAGK-GVAMGNAREDIKSIADAVTLTNDEHGVAHMMKH  286 (288)
T ss_dssp             TTCSHHHHHHHHHHHTTCCGGGEEEEESSGGGHHHHHHSSE-EEECTTCCHHHHHHCSEECCCGGGTHHHHHHHH
T ss_pred             CCCChHHHHHHHHHHhCCCHHHEEEEcCCHHHHHHHHHcCc-EEEEcCCCHHHHhhCceeecCCCcChHHHHHHH
Confidence            34577889999999999999999999999999999999999 677876543  2237888877655  5554443

>4g63_A Cytosolic IMP-GMP specific 5'-nucleotidase; structural genomics, PSI-biology, northeast structural genom consortium, NESG; 2.70A {Legionella pneumophila subsp} PDB: 2bde_A

Probab=97.73  E-value=3.3e-05  Score=71.63  Aligned_cols=124  Identities=14%  Similarity=0.074  Sum_probs=77.6

Q ss_pred             CCCChhHHHHHhcCC---CCeEEEeCCChHHHHHHHHHc---------CCccccceeEeeccCCCCC-CCCCCCCCcccc
Q 027403           55 LKPDPVLRNLLLSMP---QRKIIFTNADQKHAMEVLGRL---------GLEDCFEGIICFETINPRL-QPADNTDGIENN  121 (224)
Q Consensus        55 ~~~~~g~~~~L~~l~---~~~~I~Tn~~~~~~~~~l~~l---------gl~~~fd~ii~~~~~~~~~-~~~~~~~~~~~~  121 (224)
                      +...|.+..+|++|+   .++.++|||+...+...+..+         ...++||.||+...-+..- +.+-.++.....
T Consensus       185 i~k~~~l~~~L~~lr~~GKklFLiTNS~~~y~~~~M~y~~~~~~~~g~dWrdlFDvVIv~A~KP~FF~~~~~~~~v~~~~  264 (470)
T 4g63_A          185 VIREKEVVEGLKHFIRYGKKIFILTNSEYSYSKLLLDYALSPFLDKGEHWQGLFEFVITLANKPRFFYDNLRFLSVNPEN  264 (470)
T ss_dssp             EECCHHHHHHHHHHHTTTCEEEEECSSCHHHHHHHHHHHTGGGSCTTCCGGGGCSEEEESCCTTHHHHSCCCEEEECTTT
T ss_pred             hhCCHhHHHHHHHHHHcCCeEEEeeCCCchHHHHHHHhhcccCCCCCCChhhhcCEEEECCCCCCcccCCCcceEEECCC
Confidence            445688999999986   568899999999888877753         2567999988754321110 000000000011


Q ss_pred             cCCccccccCCCC---HHHHHHHHHHhCCCCCcEEEEeCCh-hcHHHHHH-cCCeEEEECCC
Q 027403          122 SFSSNQRILCKPS---LEAIETAIRIANVDPKKTIFFDDSA-RNIASAKA-AGLHTVIVGSS  178 (224)
Q Consensus       122 ~~~~~~~~~~KP~---~~~~~~al~~~~~~~~~~l~VgDs~-~Di~~A~~-~G~~~v~v~~~  178 (224)
                      +...+..-..+|.   ........+-+|+.-++|+||||+. .||..+++ .||+|+.|-..
T Consensus       265 g~l~~~~~~~~~~vY~gGn~~~l~~llg~~g~~VLY~GDhi~~Di~~~kk~~gWrT~~Ii~E  326 (470)
T 4g63_A          265 GTMTNVHGPIVPGVYQGGNAKKFTEDLGVGGDEILYIGDHIYGDILRLKKDCNWRTALVVEE  326 (470)
T ss_dssp             CCEEECCSSCCSEEEEECCHHHHHHHTTCCGGGEEEEESCCCSCHHHHHHSCCCEEEEECTT
T ss_pred             CcccccccccCCceeecCcHHHHHHHhCCCCCeEEEECCchHHHHHhhhhccCCeEEEEhHH
Confidence            1111111011221   2234567777899889999999998 69887775 69999999654

>3j09_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus}

Probab=97.67  E-value=0.00014  Score=70.69  Aligned_cols=108  Identities=16%  Similarity=0.204  Sum_probs=80.4

Q ss_pred             CCChhHHHHHhcCC---CCeEEEeCCChHHHHHHHHHcCCccccceeEeeccCCCCCCCCCCCCCcccccCCccccccCC
Q 027403           56 KPDPVLRNLLLSMP---QRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCK  132 (224)
Q Consensus        56 ~~~~g~~~~L~~l~---~~~~I~Tn~~~~~~~~~l~~lgl~~~fd~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~K  132 (224)
                      ++.|++.+.++.|+   .+++++|+.+...+..+.+.+|+..+|..     - .                        ++
T Consensus       535 ~~~~~~~~~i~~l~~~Gi~v~~~TGd~~~~a~~ia~~lgi~~~~~~-----~-~------------------------P~  584 (723)
T 3j09_A          535 TLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLDLVIAE-----V-L------------------------PH  584 (723)
T ss_dssp             CSCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCSEEECS-----C-C------------------------TT
T ss_pred             CcchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCcEEEcc-----C-C------------------------HH
Confidence            46788888888886   67889999999999999999998644322     1 1                        13


Q ss_pred             CCHHHHHHHHHHhCCCCCcEEEEeCChhcHHHHHHcCCeEEEECCCCC--CCCCceEe--CCHhHHHHHHH
Q 027403          133 PSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP--VPPADHAL--NSIHNIKEAIP  199 (224)
Q Consensus       133 P~~~~~~~al~~~~~~~~~~l~VgDs~~Di~~A~~~G~~~v~v~~~~~--~~~~d~~i--~~~~dl~~~i~  199 (224)
                      .+..    +++.++.. ++++||||+.||+.+.+.+|+. +.++++..  ...+|+++  +++..+.+++.
T Consensus       585 ~K~~----~v~~l~~~-~~v~~vGDg~ND~~al~~A~vg-iamg~g~~~a~~~AD~vl~~~~~~~i~~~i~  649 (723)
T 3j09_A          585 QKSE----EVKKLQAK-EVVAFVGDGINDAPALAQADLG-IAVGSGSDVAVESGDIVLIRDDLRDVVAAIQ  649 (723)
T ss_dssp             CHHH----HHHHHTTT-CCEEEEECSSTTHHHHHHSSEE-EECCCCSCCSSCCSSEECSSCCTTHHHHHHH
T ss_pred             HHHH----HHHHHhcC-CeEEEEECChhhHHHHhhCCEE-EEeCCCcHHHHHhCCEEEeCCCHHHHHHHHH
Confidence            3333    34444444 8899999999999999999963 55655544  55689998  78888887774

>1nf2_A Phosphatase; structural proteomics, HAD NEW fold, structural genomics, BSGC structure funded by NIH structure initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.108.1.10

Probab=97.60  E-value=2.1e-05  Score=66.46  Aligned_cols=71  Identities=14%  Similarity=0.163  Sum_probs=55.1

Q ss_pred             CCCCHHHHHHHHHHhCCCCCcEEEEeCChhcHHHHHHcCCeEEEECCCCC--CCCCceEeCCHhH--HHHHHHHHH
Q 027403          131 CKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP--VPPADHALNSIHN--IKEAIPEIW  202 (224)
Q Consensus       131 ~KP~~~~~~~al~~~~~~~~~~l~VgDs~~Di~~A~~~G~~~v~v~~~~~--~~~~d~~i~~~~d--l~~~i~~~~  202 (224)
                      +.+++.++..+++.+|+++++|++|||+.+|+..++.+|+. +.+.++..  ...+++++.+..+  +.++|..++
T Consensus       188 ~~~K~~~~~~~~~~~~~~~~~~~~~GD~~nD~~~~~~ag~~-v~~~n~~~~~~~~a~~v~~~~~~dGv~~~i~~~~  262 (268)
T 1nf2_A          188 NVDKGKALRFLRERMNWKKEEIVVFGDNENDLFMFEEAGLR-VAMENAIEKVKEASDIVTLTNNDSGVSYVLERIS  262 (268)
T ss_dssp             TCCHHHHHHHHHHHHTCCGGGEEEEECSHHHHHHHTTCSEE-EECTTSCHHHHHHCSEECCCTTTTHHHHHHTTBC
T ss_pred             CCChHHHHHHHHHHcCCCHHHeEEEcCchhhHHHHHHcCCE-EEecCCCHHHHhhCCEEEccCCcchHHHHHHHHH
Confidence            36788999999999999999999999999999999999994 55544332  2237888877544  666665544

>2b30_A Pvivax hypothetical protein; SGPP, structural genomics, PSI, protein structure initiative; 2.70A {Plasmodium vivax} SCOP: c.108.1.10

Probab=97.52  E-value=7.8e-05  Score=64.48  Aligned_cols=72  Identities=13%  Similarity=0.193  Sum_probs=58.3

Q ss_pred             CCCCHHHHHHHHHHhCCCCCcEEEEeCChhcHHHHHHcCCeEEEECCCCC--CCCCceEeC-CHhH--HHHHHHHHHh
Q 027403          131 CKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP--VPPADHALN-SIHN--IKEAIPEIWE  203 (224)
Q Consensus       131 ~KP~~~~~~~al~~~~~~~~~~l~VgDs~~Di~~A~~~G~~~v~v~~~~~--~~~~d~~i~-~~~d--l~~~i~~~~~  203 (224)
                      +-++..++..+++.+|++++++++|||+.||+..++.+|+. +.+.++..  ...+++++. +..+  +.++|..++.
T Consensus       222 ~~~K~~~l~~l~~~~~~~~~~~~~~GD~~nD~~m~~~ag~~-va~~na~~~~k~~a~~v~~~~~~~dGVa~~l~~~~~  298 (301)
T 2b30_A          222 GHDKYTGINYLLKHYNISNDQVLVVGDAENDIAMLSNFKYS-FAVANATDSAKSHAKCVLPVSHREGAVAYLLKKVFD  298 (301)
T ss_dssp             TCCHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHSCSEE-EECTTCCHHHHHHSSEECSSCTTTTHHHHHHHHHHT
T ss_pred             CCCcHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHcCCe-EEEcCCcHHHHhhCCEEEccCCCCcHHHHHHHHHHh
Confidence            46789999999999999999999999999999999999985 66766543  234788887 6543  7777777664

>3zx4_A MPGP, mannosyl-3-phosphoglycerate phosphatase; hydrolase, haloalkanoid acid dehalogenase-like phosphatase, crystallographic snapshot; HET: 2M8; 1.74A {Thermus thermophilus} PDB: 3zty_A 3zu6_A* 3ztw_A* 3zw7_A* 3zwd_A* 3zwk_A 3zup_A* 3zx5_A*

Probab=97.50  E-value=0.00025  Score=59.32  Aligned_cols=71  Identities=17%  Similarity=0.125  Sum_probs=56.6

Q ss_pred             CCCHHHHHHHHHHhCCCC--CcEEEEeCChhcHHHHHHcCCeEEEECCCCCCCCCceEeCC--HhHHHHHHHHHHhh
Q 027403          132 KPSLEAIETAIRIANVDP--KKTIFFDDSARNIASAKAAGLHTVIVGSSVPVPPADHALNS--IHNIKEAIPEIWEG  204 (224)
Q Consensus       132 KP~~~~~~~al~~~~~~~--~~~l~VgDs~~Di~~A~~~G~~~v~v~~~~~~~~~d~~i~~--~~dl~~~i~~~~~~  204 (224)
                      ++++.....+++.+|+++  +++++|||+.||+..++.+|+. +.+.++.. -.++++..+  -..+.++|..++..
T Consensus       175 ~~K~~~l~~l~~~~~i~~~~~~~~~~GD~~nD~~m~~~ag~~-va~~na~~-~~~~~~~~~~~~~gv~~~~~~~~~~  249 (259)
T 3zx4_A          175 ADKGRAVARLRALWPDPEEARFAVGLGDSLNDLPLFRAVDLA-VYVGRGDP-PEGVLATPAPGPEGFRYAVERYLLP  249 (259)
T ss_dssp             CCHHHHHHHHHHTCSSHHHHTSEEEEESSGGGHHHHHTSSEE-EECSSSCC-CTTCEECSSCHHHHHHHHHHHHTTT
T ss_pred             CCHHHHHHHHHHHhCCCCCCceEEEEeCCHHHHHHHHhCCCe-EEeCChhh-cCCcEEeCCCCchHHHHHHHHHHHh
Confidence            678999999999999998  9999999999999999999985 77777665 466677654  23466666666543

>3ar4_A Sarcoplasmic/endoplasmic reticulum calcium ATPase; P-type ATPase, hydrolase, calcium transport, calcium binding binding; HET: ATP TG1 PTY; 2.15A {Oryctolagus cuniculus} PDB: 2ear_A* 2eas_A* 2eat_A* 2eau_A* 2dqs_A* 2zbe_A 2zbf_A* 2zbg_A* 3ar2_A* 2zbd_A* 3ar3_A* 3ar5_A* 3ar6_A* 3ar7_A* 3ar8_A* 3ar9_A* 3n5k_A* 1kju_A 1iwo_A 1t5s_A* ...

Probab=97.49  E-value=0.00015  Score=72.70  Aligned_cols=136  Identities=15%  Similarity=0.182  Sum_probs=82.7

Q ss_pred             CCChhHHHHHhcCC---CCeEEEeCCChHHHHHHHHHcCCccccc----eeEeeccCCCCCCCCCCCCCcccccCCcccc
Q 027403           56 KPDPVLRNLLLSMP---QRKIIFTNADQKHAMEVLGRLGLEDCFE----GIICFETINPRLQPADNTDGIENNSFSSNQR  128 (224)
Q Consensus        56 ~~~~g~~~~L~~l~---~~~~I~Tn~~~~~~~~~l~~lgl~~~fd----~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~  128 (224)
                      ++.|++.++++.|+   .+++++|+.....+..+.+.+|+....+    .++++++..... +........  +..-..+
T Consensus       603 ~lr~~~~~~I~~l~~~Gi~v~miTGD~~~ta~~ia~~lgi~~~~~~i~~~~~~g~~~~~l~-~~~~~~~~~--~~~v~~r  679 (995)
T 3ar4_A          603 PPRKEVMGSIQLCRDAGIRVIMITGDNKGTAIAICRRIGIFGENEEVADRAYTGREFDDLP-LAEQREACR--RACCFAR  679 (995)
T ss_dssp             CBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHTSSCTTCCCTTTEEEHHHHHTSC-HHHHHHHHH--HCCEEES
T ss_pred             CCchhHHHHHHHHHHcCCEEEEECCCCHHHHHHHHHHcCcCCCCCcccceEEEchhhhhCC-HHHHHHHHh--hCcEEEE
Confidence            46688998888886   7889999999999999999999865432    234433221100 000000000  0000000


Q ss_pred             ccCCCCHHHHHHHHHHhCCCCCcEEEEeCChhcHHHHHHcCCeEEEECCCCC--CCCCceEe--CCHhHHHHHHH
Q 027403          129 ILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP--VPPADHAL--NSIHNIKEAIP  199 (224)
Q Consensus       129 ~~~KP~~~~~~~al~~~~~~~~~~l~VgDs~~Di~~A~~~G~~~v~v~~~~~--~~~~d~~i--~~~~dl~~~i~  199 (224)
                        ..|.  --..+++.++...+.|.++||+.||+.+.+++++. +.++.+..  ...+|+++  +++..+.+++.
T Consensus       680 --~~P~--~K~~~v~~l~~~g~~v~~~GDG~ND~~alk~Advg-iamg~g~~~ak~aAd~vl~~~~~~~i~~~i~  749 (995)
T 3ar4_A          680 --VEPS--HKSKIVEYLQSYDEITAMTGDGVNDAPALKKAEIG-IAMGSGTAVAKTASEMVLADDNFSTIVAAVE  749 (995)
T ss_dssp             --CCSS--HHHHHHHHHHTTTCCEEEEECSGGGHHHHHHSTEE-EEETTSCHHHHHTCSEEETTCCHHHHHHHHH
T ss_pred             --eCHH--HHHHHHHHHHHCCCEEEEEcCCchhHHHHHHCCeE-EEeCCCCHHHHHhCCEEECCCCHHHHHHHHH
Confidence              1232  22233333333357899999999999999999985 56665543  34589998  56888888763

>3rfu_A Copper efflux ATPase; alpha helical, CPC, CXXC, ATP-binding, hydrolase, ION transp magnesium, Cu+, membrane, metal-binding; 3.20A {Legionella pneumophila subsp}

Probab=97.44  E-value=0.00021  Score=69.72  Aligned_cols=109  Identities=14%  Similarity=0.188  Sum_probs=79.4

Q ss_pred             CCChhHHHHHhcCC---CCeEEEeCCChHHHHHHHHHcCCccccceeEeeccCCCCCCCCCCCCCcccccCCccccccCC
Q 027403           56 KPDPVLRNLLLSMP---QRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCK  132 (224)
Q Consensus        56 ~~~~g~~~~L~~l~---~~~~I~Tn~~~~~~~~~l~~lgl~~~fd~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~K  132 (224)
                      ++.|++++.++.|+   .+++++|+.+...+..+.+.+|+.+++..                                  
T Consensus       554 ~i~~~~~~aI~~L~~~Gi~v~mlTGd~~~~a~~ia~~lgi~~v~a~----------------------------------  599 (736)
T 3rfu_A          554 PIKSSTPETILELQQSGIEIVMLTGDSKRTAEAVAGTLGIKKVVAE----------------------------------  599 (736)
T ss_dssp             CBCSSHHHHHHHHHHHTCEEEEECSSCHHHHHHHHHHHTCCCEECS----------------------------------
T ss_pred             cchhhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCEEEEe----------------------------------
Confidence            45678888888886   78899999999999999999998654321                                  


Q ss_pred             CCHHHHHHHHHHhCCCCCcEEEEeCChhcHHHHHHcCCeEEEECCCCC--CCCCceEe--CCHhHHHHHHH
Q 027403          133 PSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP--VPPADHAL--NSIHNIKEAIP  199 (224)
Q Consensus       133 P~~~~~~~al~~~~~~~~~~l~VgDs~~Di~~A~~~G~~~v~v~~~~~--~~~~d~~i--~~~~dl~~~i~  199 (224)
                      -.|+--..+++.++-..+.++||||+.||+.+-+.+++- |.++++..  ...+|+++  +++..+...+.
T Consensus       600 ~~P~~K~~~v~~l~~~g~~V~~vGDG~ND~paL~~AdvG-IAmg~g~d~a~~~AD~vl~~~~~~~i~~ai~  669 (736)
T 3rfu_A          600 IMPEDKSRIVSELKDKGLIVAMAGDGVNDAPALAKADIG-IAMGTGTDVAIESAGVTLLHGDLRGIAKARR  669 (736)
T ss_dssp             CCHHHHHHHHHHHHHHSCCEEEEECSSTTHHHHHHSSEE-EEESSSCSHHHHHCSEEECSCCSTTHHHHHH
T ss_pred             cCHHHHHHHHHHHHhcCCEEEEEECChHhHHHHHhCCEE-EEeCCccHHHHHhCCEEEccCCHHHHHHHHH
Confidence            122223334444444567899999999999999999974 66766654  34478887  56777766653

>3qle_A TIM50P; chaperone, mitochondrion, preprotein translocation; HET: 1PE; 1.83A {Saccharomyces cerevisiae EC1118}

Probab=97.39  E-value=1.1e-05  Score=67.16  Aligned_cols=91  Identities=11%  Similarity=0.026  Sum_probs=71.2

Q ss_pred             CCCChhHHHHHhcCC--CCeEEEeCCChHHHHHHHHHcCCc-cccceeEeeccCCCCCCCCCCCCCcccccCCccccccC
Q 027403           55 LKPDPVLRNLLLSMP--QRKIIFTNADQKHAMEVLGRLGLE-DCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILC  131 (224)
Q Consensus        55 ~~~~~g~~~~L~~l~--~~~~I~Tn~~~~~~~~~l~~lgl~-~~fd~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  131 (224)
                      +..-||+.++|+.+.  +.++|.|++.+.++..+++.++.. .+|+.+++.++....                       
T Consensus        58 v~~RPgl~eFL~~l~~~yeivI~Tas~~~ya~~vl~~LDp~~~~f~~rl~R~~c~~~-----------------------  114 (204)
T 3qle_A           58 TAKRPGADYFLGYLSQYYEIVLFSSNYMMYSDKIAEKLDPIHAFVSYNLFKEHCVYK-----------------------  114 (204)
T ss_dssp             EEECTTHHHHHHHHTTTEEEEEECSSCHHHHHHHHHHTSTTCSSEEEEECGGGSEEE-----------------------
T ss_pred             EEeCCCHHHHHHHHHhCCEEEEEcCCcHHHHHHHHHHhCCCCCeEEEEEEecceeEE-----------------------
Confidence            567899999999998  789999999999999999999986 489887765543321                       


Q ss_pred             CCCHHHHHHHHHHhCCCCCcEEEEeCChhcHHHHHHcCCe
Q 027403          132 KPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLH  171 (224)
Q Consensus       132 KP~~~~~~~al~~~~~~~~~~l~VgDs~~Di~~A~~~G~~  171 (224)
                         ...|...++.+|.++++|++|+|++.........|+.
T Consensus       115 ---~g~y~KdL~~Lgrdl~~vIiIDDsp~~~~~~p~N~I~  151 (204)
T 3qle_A          115 ---DGVHIKDLSKLNRDLSKVIIIDTDPNSYKLQPENAIP  151 (204)
T ss_dssp             ---TTEEECCGGGSCSCGGGEEEEESCTTTTTTCGGGEEE
T ss_pred             ---CCeeeecHHHhCCChHHEEEEECCHHHHhhCccCceE
Confidence               1124556777899999999999999877655444544

>4fe3_A Cytosolic 5'-nucleotidase 3; substrate complex, HAD-like, protein binding; HET: U5P; 1.74A {Mus musculus} PDB: 2g09_A* 2bdu_A* 2g08_A 2g06_A* 2g0a_A* 2q4t_A* 2g07_A* 2jga_A 2vkq_A 2cn1_A

Probab=97.36  E-value=0.00012  Score=62.94  Aligned_cols=108  Identities=13%  Similarity=0.042  Sum_probs=66.7

Q ss_pred             CCCCCChhHHHHHhcCC---CCeEEEeCCChHHHHHHHHHcCCccccceeEeeccCCCCCCCCCCCCCcccccCC-cccc
Q 027403           53 EKLKPDPVLRNLLLSMP---QRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFS-SNQR  128 (224)
Q Consensus        53 ~~~~~~~g~~~~L~~l~---~~~~I~Tn~~~~~~~~~l~~lgl~~~fd~ii~~~~~~~~~~~~~~~~~~~~~~~~-~~~~  128 (224)
                      ..+++.||+.++++.|+   .+++|+|+.....+..+++.+|+......+++.......        ......+. +..-
T Consensus       138 ~~i~l~~g~~e~i~~l~~~gi~v~ivSgg~~~~i~~i~~~~g~~~~~~~i~~n~l~~~~--------~~~~~~~~~~~i~  209 (297)
T 4fe3_A          138 SDVMLKEGYENFFGKLQQHGIPVFIFSAGIGDVLEEVIRQAGVYHSNVKVVSNFMDFDE--------NGVLKGFKGELIH  209 (297)
T ss_dssp             SCCCBCBTHHHHHHHHHHTTCCEEEEEEEEHHHHHHHHHHTTCCCTTEEEEEECEEECT--------TSBEEEECSSCCC
T ss_pred             cCCCCCCcHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHHHcCCCcccceEEeeeEEEcc--------cceeEeccccccc
Confidence            45788999999999996   789999999999999999999986433334432211000        00000000 0000


Q ss_pred             ccCCCCHHHHHHHHHHhCCCCCcEEEEeCChhcHHHHHHc
Q 027403          129 ILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAA  168 (224)
Q Consensus       129 ~~~KP~~~~~~~al~~~~~~~~~~l~VgDs~~Di~~A~~~  168 (224)
                      ...|+.+..=......+.-...+|++|||+.||+.+++.+
T Consensus       210 ~~~k~~~~~k~~~~~~~~~~~~~v~~vGDGiNDa~m~k~l  249 (297)
T 4fe3_A          210 VFNKHDGALKNTDYFSQLKDNSNIILLGDSQGDLRMADGV  249 (297)
T ss_dssp             TTCHHHHHHTCHHHHHHTTTCCEEEEEESSGGGGGTTTTC
T ss_pred             hhhcccHHHHHHHHHHhhccCCEEEEEeCcHHHHHHHhCc
Confidence            0123333332334445555678899999999999987644

>1y8a_A Hypothetical protein AF1437; structural genomics, protein structu initiative, PSI, midwest center for structural genomics; 1.40A {Archaeoglobus fulgidus} SCOP: c.108.1.24

Probab=97.33  E-value=0.00014  Score=63.48  Aligned_cols=57  Identities=19%  Similarity=0.166  Sum_probs=45.0

Q ss_pred             CCCCCc----EEEEeCChhcHHHHHHc----CCeEEEECCCCC--CCCCceEeCC--HhHHHHHHHHHHhh
Q 027403          146 NVDPKK----TIFFDDSARNIASAKAA----GLHTVIVGSSVP--VPPADHALNS--IHNIKEAIPEIWEG  204 (224)
Q Consensus       146 ~~~~~~----~l~VgDs~~Di~~A~~~----G~~~v~v~~~~~--~~~~d~~i~~--~~dl~~~i~~~~~~  204 (224)
                      ++++++    |++|||+.||+..++.+    |+. +.+ ++..  ...+++++.+  ...+.++|..++..
T Consensus       214 gi~~~~~~~~via~GDs~NDi~ml~~A~~~~g~~-vam-na~~~lk~~Ad~v~~~~~~dGV~~~l~~~~~~  282 (332)
T 1y8a_A          214 GYCESKGIDFPVVVGDSISDYKMFEAARGLGGVA-IAF-NGNEYALKHADVVIISPTAMSEAKVIELFMER  282 (332)
T ss_dssp             HHHHHHTCSSCEEEECSGGGHHHHHHHHHTTCEE-EEE-SCCHHHHTTCSEEEECSSTHHHHHHHHHHHHH
T ss_pred             ccChhhcCceEEEEeCcHhHHHHHHHHhhcCCeE-EEe-cCCHHHHhhCcEEecCCCCCHHHHHHHHHHHc
Confidence            667888    99999999999999999    996 555 5543  4568998876  77788888876643

>1s2o_A SPP, sucrose-phosphatase; phosphohydrolase, HAD superfamily, cyanobacteria; 1.40A {Synechocystis SP} SCOP: c.108.1.10 PDB: 1tj3_A 1tj4_A* 1tj5_A* 1u2s_A* 1u2t_A* 2b1q_A* 2b1r_A* 2d2v_A*

Probab=97.15  E-value=0.00026  Score=59.11  Aligned_cols=68  Identities=24%  Similarity=0.257  Sum_probs=52.9

Q ss_pred             CCCCHHHHHHHHHHhCCCCCcEEEEeCChhcHHHHHHcCCeEEEECCCCC--CC-------CCceEeCCHhH--HHHHHH
Q 027403          131 CKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP--VP-------PADHALNSIHN--IKEAIP  199 (224)
Q Consensus       131 ~KP~~~~~~~al~~~~~~~~~~l~VgDs~~Di~~A~~~G~~~v~v~~~~~--~~-------~~d~~i~~~~d--l~~~i~  199 (224)
                      +-+++..+..+++.+|++++++++|||+.||+..++.+|+ .+.+.++.+  ..       .++++..+..+  +.+.|.
T Consensus       160 ~~~K~~~l~~l~~~~~~~~~~~~~~GD~~nD~~m~~~~g~-~va~~na~~~~k~~a~~~~~~a~~v~~~~~~dGva~~i~  238 (244)
T 1s2o_A          160 RSNKGNATQYLQQHLAMEPSQTLVCGDSGNDIGLFETSAR-GVIVRNAQPELLHWYDQWGDSRHYRAQSSHAGAILEAIA  238 (244)
T ss_dssp             TCSHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHTSSSE-EEECTTCCHHHHHHHHHHCCTTEEECSSCHHHHHHHHHH
T ss_pred             CCChHHHHHHHHHHhCCCHHHEEEECCchhhHHHHhccCc-EEEEcCCcHHHHHHHhcccccceeecCCcchhHHHHHHH
Confidence            4688999999999999999999999999999999998888 467765543  11       36788776544  444443

>1xvi_A MPGP, YEDP, putative mannosyl-3-phosphoglycerate phosphatase; hypothetical protein, conserved protein, phophatase-like domain; HET: 1PE PG4 PGE; 2.26A {Escherichia coli K12} SCOP: c.108.1.10

Probab=96.72  E-value=0.00092  Score=56.69  Aligned_cols=71  Identities=15%  Similarity=0.114  Sum_probs=43.4

Q ss_pred             CCCCHHHHHHHHHHhC-CCCCc--EEEEeCChhcHHHHHHcCCeEEEECCCC---CCC----CCc-eEeCCHh--HHHHH
Q 027403          131 CKPSLEAIETAIRIAN-VDPKK--TIFFDDSARNIASAKAAGLHTVIVGSSV---PVP----PAD-HALNSIH--NIKEA  197 (224)
Q Consensus       131 ~KP~~~~~~~al~~~~-~~~~~--~l~VgDs~~Di~~A~~~G~~~v~v~~~~---~~~----~~d-~~i~~~~--dl~~~  197 (224)
                      +-++......+++.+| +++++  +++|||+.||+...+.+|+. +.+.++.   ..-    .++ ++..+..  -+.++
T Consensus       187 ~~~K~~~l~~l~~~~~~~~~~~~~~~~~GD~~nD~~m~~~ag~~-va~~n~~~~~~~~~~~~~a~~~v~~~~~~dGVa~~  265 (275)
T 1xvi_A          187 SAGKDQAANWIIATYQQLSGKRPTTLGLGDGPNDAPLLEVMDYA-VIVKGLNREGVHLHDEDPARVWRTQREGPEGWREG  265 (275)
T ss_dssp             TCCHHHHHHHHHHHHHHHHSSCCEEEEEESSGGGHHHHHTSSEE-EECCCCC----------------------------
T ss_pred             CCCHHHHHHHHHHHhhhcccccCcEEEECCChhhHHHHHhCCce-EEecCCCccchhhccccCCceeEccCCCchHHHHH
Confidence            4678999999999999 99999  99999999999999999984 8887775   211    256 6665433  35555


Q ss_pred             HHHHH
Q 027403          198 IPEIW  202 (224)
Q Consensus       198 i~~~~  202 (224)
                      |..++
T Consensus       266 l~~~l  270 (275)
T 1xvi_A          266 LDHFF  270 (275)
T ss_dssp             -----
T ss_pred             HHHHH
Confidence            55544

>3ef0_A RNA polymerase II subunit A C-terminal domain phosphatase; CTD, FCPH, BRCT, hydrolase, ALF4, transition state analog, cobalt, magnesium; 2.10A {Schizosaccharomyces pombe}

Probab=96.34  E-value=0.00093  Score=60.21  Aligned_cols=77  Identities=18%  Similarity=0.251  Sum_probs=60.2

Q ss_pred             CCCChhHHHHHhcCC--CCeEEEeCCChHHHHHHHHHcCCcc-ccce-eEeeccCCCCCCCCCCCCCcccccCCcccccc
Q 027403           55 LKPDPVLRNLLLSMP--QRKIIFTNADQKHAMEVLGRLGLED-CFEG-IICFETINPRLQPADNTDGIENNSFSSNQRIL  130 (224)
Q Consensus        55 ~~~~~g~~~~L~~l~--~~~~I~Tn~~~~~~~~~l~~lgl~~-~fd~-ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  130 (224)
                      +...||+.++|+.+.  +.++|.|++.+.++..+++.++... +|+. +++.++.+.                       
T Consensus        74 v~~RPg~~eFL~~l~~~yeivI~Tas~~~yA~~vl~~LDp~~~~f~~ri~sr~~~g~-----------------------  130 (372)
T 3ef0_A           74 IKFRPGLAQFLQKISELYELHIYTMGTKAYAKEVAKIIDPTGKLFQDRVLSRDDSGS-----------------------  130 (372)
T ss_dssp             EEECTTHHHHHHHHHTTEEEEEECSSCHHHHHHHHHHHCTTSCSSSSCEECTTTSSC-----------------------
T ss_pred             EEECcCHHHHHHHHhcCcEEEEEeCCcHHHHHHHHHHhccCCceeeeEEEEecCCCC-----------------------
Confidence            567899999999997  7899999999999999999999887 7874 555443221                       


Q ss_pred             CCCCHHHHHHHHHHh-CCCCCcEEEEeCChh
Q 027403          131 CKPSLEAIETAIRIA-NVDPKKTIFFDDSAR  160 (224)
Q Consensus       131 ~KP~~~~~~~al~~~-~~~~~~~l~VgDs~~  160 (224)
                            .|...++++ |.++++|++|+|++.
T Consensus       131 ------~~~KdL~~L~~~dl~~viiiDd~~~  155 (372)
T 3ef0_A          131 ------LAQKSLRRLFPCDTSMVVVIDDRGD  155 (372)
T ss_dssp             ------SSCCCGGGTCSSCCTTEEEEESCSG
T ss_pred             ------cceecHHHhcCCCCceEEEEeCCHH
Confidence                  112234444 889999999999985

>2zos_A MPGP, mannosyl-3-phosphoglycerate phosphatase; haloacid dehalogenase like hydrolase, mannosylglycerate, cytoplasm, hydrolase, magnesium; 1.70A {Pyrococcus horikoshii} PDB: 1wzc_A

Probab=96.31  E-value=0.0014  Score=54.70  Aligned_cols=59  Identities=12%  Similarity=-0.039  Sum_probs=46.7

Q ss_pred             CCCHHHHHHHHHHhCC-CCCcEEEEeCChhcHHHHHHcCCeEEEECCCC-C--CCCCceEeCCH
Q 027403          132 KPSLEAIETAIRIANV-DPKKTIFFDDSARNIASAKAAGLHTVIVGSSV-P--VPPADHALNSI  191 (224)
Q Consensus       132 KP~~~~~~~al~~~~~-~~~~~l~VgDs~~Di~~A~~~G~~~v~v~~~~-~--~~~~d~~i~~~  191 (224)
                      -.+......+++.+++ +++++++|||+.||+...+.+|.. +.+.++. .  ...+++++++.
T Consensus       178 ~sKg~al~~l~~~~~~~~~~~viafGD~~NDi~Ml~~ag~~-va~gna~~~~~~~~a~~v~~~~  240 (249)
T 2zos_A          178 SDKGKAAKILLDFYKRLGQIESYAVGDSYNDFPMFEVVDKV-FIVGSLKHKKAQNVSSIIDVLE  240 (249)
T ss_dssp             CCHHHHHHHHHHHHHTTSCEEEEEEECSGGGHHHHTTSSEE-EEESSCCCTTEEEESSHHHHHH
T ss_pred             CChHHHHHHHHHHhccCCCceEEEECCCcccHHHHHhCCcE-EEeCCCCccccchhceEEeccc
Confidence            5678899999999998 999999999999999999999985 7776654 2  12355555443

>2zxe_A Na, K-ATPase alpha subunit; membrane protein, ION pump, ATPase, K+ binding, haloacid dehydrogenease superfamily, phosphate analogue; HET: CLR NAG NDG; 2.40A {Squalus acanthias} PDB: 3a3y_A* 3b8e_A* 3kdp_A* 3n2f_A* 3n23_A* 1mo7_A 1mo8_A* 1q3i_A

Probab=96.30  E-value=0.0093  Score=60.08  Aligned_cols=138  Identities=13%  Similarity=0.107  Sum_probs=78.9

Q ss_pred             CCChhHHHHHhcCC---CCeEEEeCCChHHHHHHHHHcCCcccc------------------------ceeEeeccCCCC
Q 027403           56 KPDPVLRNLLLSMP---QRKIIFTNADQKHAMEVLGRLGLEDCF------------------------EGIICFETINPR  108 (224)
Q Consensus        56 ~~~~g~~~~L~~l~---~~~~I~Tn~~~~~~~~~l~~lgl~~~f------------------------d~ii~~~~~~~~  108 (224)
                      ++.|++.++++.|+   .+++++|+.+...+..+.+.+|+...-                        ..+++.++....
T Consensus       599 plr~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lgi~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~vi~G~~l~~~  678 (1028)
T 2zxe_A          599 PPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKGVGIISEGNETIEDIAARLNIPIGQVNPRDAKACVVHGSDLKDL  678 (1028)
T ss_dssp             CBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTSSCTTCCCHHHHHHHTTCCGGGSCGGGCCEEEEEHHHHTTC
T ss_pred             CCChhHHHHHHHHHHcCCEEEEECCCCHHHHHHHHHHcCCCCCCchhHHHHHhhcCcchhhccccccceEEEEcHHhhhC
Confidence            46788988888886   788999999999999999999985311                        112222111100


Q ss_pred             CCCCCCCCCcccccCCccccccCCCCHHHHHHHHHHhCCCCCcEEEEeCChhcHHHHHHcCCeEEEEC-CCCC--CCCCc
Q 027403          109 LQPADNTDGIENNSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVG-SSVP--VPPAD  185 (224)
Q Consensus       109 ~~~~~~~~~~~~~~~~~~~~~~~KP~~~~~~~al~~~~~~~~~~l~VgDs~~Di~~A~~~G~~~v~v~-~~~~--~~~~d  185 (224)
                      .. . ..+-....  ++ ...-+...|.--..+.+.++-....|.++||+.||+.+-+.+++- |.++ ++..  ..-+|
T Consensus       679 ~~-~-~l~~~~~~--~~-~~v~ar~~P~~K~~iV~~lq~~g~~V~~iGDG~ND~paLk~AdvG-IAmg~~gtd~ak~aAD  752 (1028)
T 2zxe_A          679 ST-E-VLDDILHY--HT-EIVFARTSPQQKLIIVEGCQRQGAIVAVTGDGVNDSPALKKADIG-VAMGISGSDVSKQAAD  752 (1028)
T ss_dssp             CH-H-HHHHHHHH--CS-EEEEESCCHHHHHHHHHHHHHTTCCEEEEECSGGGHHHHHHSSEE-EEESSSCCHHHHHHCS
T ss_pred             CH-H-HHHHHHhh--CC-cEEEEEcCHHHHHHHHHHHHhCCCEEEEEcCCcchHHHHHhCCce-EEeCCccCHHHHHhcC
Confidence            00 0 00000000  00 000112233333333333322236799999999999999999985 5566 3543  23478


Q ss_pred             eEeCC--HhHHHHHHH
Q 027403          186 HALNS--IHNIKEAIP  199 (224)
Q Consensus       186 ~~i~~--~~dl~~~i~  199 (224)
                      +++.+  +..+.++|.
T Consensus       753 ~Vl~~~~~~~I~~~i~  768 (1028)
T 2zxe_A          753 MILLDDNFASIVTGVE  768 (1028)
T ss_dssp             EEETTCCTHHHHHHHH
T ss_pred             EEecCCCHHHHHHHHH
Confidence            88744  777777663

>4gxt_A A conserved functionally unknown protein; structural genomics, PSI-biology; 1.82A {Anaerococcus prevotii}

Probab=96.13  E-value=0.0041  Score=56.07  Aligned_cols=106  Identities=11%  Similarity=0.072  Sum_probs=63.6

Q ss_pred             CCCChhHHHHHhcCC---CCeEEEeCCChHHHHHHHHHcCCcccc--ceeEeeccCCCCCCCCCCCCCcccccCCcc-cc
Q 027403           55 LKPDPVLRNLLLSMP---QRKIIFTNADQKHAMEVLGRLGLEDCF--EGIICFETINPRLQPADNTDGIENNSFSSN-QR  128 (224)
Q Consensus        55 ~~~~~g~~~~L~~l~---~~~~I~Tn~~~~~~~~~l~~lgl~~~f--d~ii~~~~~~~~~~~~~~~~~~~~~~~~~~-~~  128 (224)
                      ++++|++.++++.|+   .+++|+|++....++.+.+.+|+..-+  +.|++..-...       -+|.....+.+. +.
T Consensus       220 ir~~p~~~eLi~~L~~~G~~v~IVSgg~~~~v~~ia~~lg~~y~ip~~~Vig~~l~~~-------~dG~~tg~~~~~~p~  292 (385)
T 4gxt_A          220 IRTLDEMVDLYRSLEENGIDCYIVSASFIDIVRAFATDTNNNYKMKEEKVLGLRLMKD-------DEGKILPKFDKDFPI  292 (385)
T ss_dssp             CEECHHHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHCTTSSCCCCGGGEEEECEEEC-------TTCCEEEEECTTSCC
T ss_pred             ceeCHHHHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHhCcccCCCcceEEEeEEEEe-------cCCceeeeecCccce
Confidence            447999999999997   789999999999999999999864222  34555431110       001000000000 00


Q ss_pred             ccCCCCHHHHHHHHHHhCCCCCcEEEEeCChhcHHHHHHc
Q 027403          129 ILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAA  168 (224)
Q Consensus       129 ~~~KP~~~~~~~al~~~~~~~~~~l~VgDs~~Di~~A~~~  168 (224)
                      .-+.-++......++. ......++.+|||.+|+..-...
T Consensus       293 ~~~~gK~~~i~~~~~~-~~~~~~i~a~GDs~~D~~ML~~~  331 (385)
T 4gxt_A          293 SIREGKVQTINKLIKN-DRNYGPIMVGGDSDGDFAMLKEF  331 (385)
T ss_dssp             CSTHHHHHHHHHHTCC-TTEECCSEEEECSGGGHHHHHHC
T ss_pred             eCCCchHHHHHHHHHh-cCCCCcEEEEECCHhHHHHHhcC
Confidence            0112233444333322 23456799999999999998764

>1mhs_A Proton pump, plasma membrane ATPase; ION transport, membrane protein, P-type ATPase, active transport, cryo-electron microscopy; 8.00A {Neurospora crassa} SCOP: i.18.1.1

Probab=95.86  E-value=0.012  Score=58.85  Aligned_cols=133  Identities=15%  Similarity=0.110  Sum_probs=79.8

Q ss_pred             CCChhHHHHHhcCC---CCeEEEeCCChHHHHHHHHHcCCccc-cce---eEeecc-CCCCCCCCCCCCCcccccCCccc
Q 027403           56 KPDPVLRNLLLSMP---QRKIIFTNADQKHAMEVLGRLGLEDC-FEG---IICFET-INPRLQPADNTDGIENNSFSSNQ  127 (224)
Q Consensus        56 ~~~~g~~~~L~~l~---~~~~I~Tn~~~~~~~~~l~~lgl~~~-fd~---ii~~~~-~~~~~~~~~~~~~~~~~~~~~~~  127 (224)
                      ++.|+++++++.|+   .+++++|+-...-+..+-+.+|+... ++.   +++.++ ....    ...+.+..  .....
T Consensus       535 p~R~ea~~aI~~l~~aGI~v~MiTGD~~~TA~aIA~~lGI~~~~~~~~~~~~~g~~~~~~~----el~~~~~~--~~V~a  608 (920)
T 1mhs_A          535 PPRHDTYKTVCEAKTLGLSIKMLTGDAVGIARETSRQLGLGTNIYNAERLGLGGGGDMPGS----EVYDFVEA--ADGFA  608 (920)
T ss_dssp             CCCHHHHHHHHHHHHHTCEEEEEESSCHHHHHHHHHHHTSSCSCCCSSSSSSCBCCCGGGG----GGGTTTTT--TSCEE
T ss_pred             cccccHHHHHHHHhhcCceEEEEcCCCHHHHHHHHHHcCCCccccCccceeecCcccCCHH----HHHHHHhh--CeEEE
Confidence            57789999999986   78999999999999999999998532 111   111110 0000    00000000  00111


Q ss_pred             cccCCCCHHHHHHHHHHhCCCCCcEEEEeCChhcHHHHHHcCCeEEEECCCCC--CCCCceEe--CCHhHHHHHHH
Q 027403          128 RILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP--VPPADHAL--NSIHNIKEAIP  199 (224)
Q Consensus       128 ~~~~KP~~~~~~~al~~~~~~~~~~l~VgDs~~Di~~A~~~G~~~v~v~~~~~--~~~~d~~i--~~~~dl~~~i~  199 (224)
                      +..+.-+..+.+ .+++.|   +.|.|+||+.||..+-+.+++- |.++.+..  ..-+|+++  +++..+.+.+.
T Consensus       609 rv~P~~K~~iV~-~Lq~~g---~~Vam~GDGvNDapaLk~AdvG-IAmg~gtd~ak~aADiVl~~~~~~~I~~ai~  679 (920)
T 1mhs_A          609 EVFPQHKYNVVE-ILQQRG---YLVAMTGDGVNDAPSLKKADTG-IAVEGSSDAARSAADIVFLAPGLGAIIDALK  679 (920)
T ss_dssp             SCCSTHHHHHHH-HHHTTT---CCCEECCCCGGGHHHHHHSSEE-EEETTSCHHHHHSSSEEESSCCSHHHHHHHH
T ss_pred             EeCHHHHHHHHH-HHHhCC---CeEEEEcCCcccHHHHHhCCcC-cccccccHHHHHhcCeEEcCCCHHHHHHHHH
Confidence            222232333333 333333   7799999999999999999985 66765543  34478887  46777766653

>3ixz_A Potassium-transporting ATPase alpha; ION pump, H+, K+-ATPase, P-type ATPase, membrane protein, hydrolase, aluminium fluoride, ATP-binding; 6.50A {Sus scrofa} PDB: 2yn9_A 2xzb_A 1iwc_A 1iwf_A

Probab=95.45  E-value=0.076  Score=53.50  Aligned_cols=137  Identities=13%  Similarity=0.126  Sum_probs=76.4

Q ss_pred             CCChhHHHHHhcCC---CCeEEEeCCChHHHHHHHHHcCCccccc------------------------eeEeeccCCCC
Q 027403           56 KPDPVLRNLLLSMP---QRKIIFTNADQKHAMEVLGRLGLEDCFE------------------------GIICFETINPR  108 (224)
Q Consensus        56 ~~~~g~~~~L~~l~---~~~~I~Tn~~~~~~~~~l~~lgl~~~fd------------------------~ii~~~~~~~~  108 (224)
                      ++-|++.++++.|+   .+++++|+.+...+....+.+|+..--.                        .+++.......
T Consensus       604 p~r~~~~~aI~~l~~aGI~vvmiTGd~~~tA~~ia~~lgi~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~  683 (1034)
T 3ixz_A          604 PPRATVPDAVLKCRTAGIRVIMVTGDHPITAKAIAASVGIISEGSETVEDIAARLRVPVDQVNRKDARACVINGMQLKDM  683 (1034)
T ss_pred             CCchhHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCCCCCCchHHHHHHHhhCccchhccccccceeEEecHhhhhC
Confidence            56788999998886   7888999999999999999999842110                        01111110000


Q ss_pred             CCCCCCCCCcccccCCccccccCCCCHHHHHHHHHHhCCCCCcEEEEeCChhcHHHHHHcCCeEEEEC-CCCC--CCCCc
Q 027403          109 LQPADNTDGIENNSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVG-SSVP--VPPAD  185 (224)
Q Consensus       109 ~~~~~~~~~~~~~~~~~~~~~~~KP~~~~~~~al~~~~~~~~~~l~VgDs~~Di~~A~~~G~~~v~v~-~~~~--~~~~d  185 (224)
                      .. .......   ...+. ...+.-.|.--..+.+.++-....|+++||+.||+.+-+.+|+- |.++ ++..  ..-+|
T Consensus       684 ~~-~~l~~~~---~~~~~-~v~ar~~P~~K~~iv~~lq~~g~~V~a~GDG~ND~~mLk~A~vG-IAMg~ng~d~aK~aAD  757 (1034)
T 3ixz_A          684 DP-SELVEAL---RTHPE-MVFARTSPQQKLVIVESCQRLGAIVAVTGDGVNDSPALKKADIG-VAMGIAGSDAAKNAAD  757 (1034)
T ss_pred             CH-HHHHHHH---HhCCc-eEEEecCHHHHHHHHHHHHHcCCEEEEECCcHHhHHHHHHCCee-EEeCCccCHHHHHhcC
Confidence            00 0000000   00000 00011122222233333332336699999999999999999974 6665 4443  45588


Q ss_pred             eEeCC--HhHHHHHH
Q 027403          186 HALNS--IHNIKEAI  198 (224)
Q Consensus       186 ~~i~~--~~dl~~~i  198 (224)
                      +++.+  +..+..++
T Consensus       758 ~Vl~~~~~~gI~~ai  772 (1034)
T 3ixz_A          758 MILLDDNFASIVTGV  772 (1034)
T ss_pred             EEeccCCchHHHHHH
Confidence            88744  55566555

>1u02_A Trehalose-6-phosphate phosphatase related protein; structural genomics, PSI; 1.92A {Thermoplasma acidophilum} SCOP: c.108.1.15

Probab=94.98  E-value=0.074  Score=43.84  Aligned_cols=65  Identities=22%  Similarity=0.159  Sum_probs=50.1

Q ss_pred             CCCHHHHHHHHHHhCCCCCcEEEEeCChhcHHHHHHc--CCeEEEECCCCCCCCCceEeCC---HhHHHHHHHHHHhh
Q 027403          132 KPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAA--GLHTVIVGSSVPVPPADHALNS---IHNIKEAIPEIWEG  204 (224)
Q Consensus       132 KP~~~~~~~al~~~~~~~~~~l~VgDs~~Di~~A~~~--G~~~v~v~~~~~~~~~d~~i~~---~~dl~~~i~~~~~~  204 (224)
                      -.+..+.+.+++.+|     +++|||+.||+..-..+  |. ++.+.++  ...+++++.+   -..+.++|..++..
T Consensus       159 ~~Kg~al~~l~~~~g-----via~GD~~ND~~Ml~~a~~g~-~vam~Na--~~~A~~v~~~~~~~~gV~~~l~~~~~~  228 (239)
T 1u02_A          159 VNKGSAIRSVRGERP-----AIIAGDDATDEAAFEANDDAL-TIKVGEG--ETHAKFHVADYIEMRKILKFIEMLGVQ  228 (239)
T ss_dssp             CCHHHHHHHHHTTSC-----EEEEESSHHHHHHHHTTTTSE-EEEESSS--CCCCSEEESSHHHHHHHHHHHHHHHHH
T ss_pred             CCHHHHHHHHHhhCC-----eEEEeCCCccHHHHHHhhCCc-EEEECCC--CCcceEEeCCCCCHHHHHHHHHHHHHh
Confidence            345666666666666     99999999999999988  86 5778776  4668999988   66677777776654

>3shq_A UBLCP1; phosphatase, hydrolase; 1.96A {Drosophila melanogaster}

Probab=94.63  E-value=0.0041  Score=54.85  Aligned_cols=94  Identities=19%  Similarity=0.212  Sum_probs=63.7

Q ss_pred             CCChhHHHHHhcCC--CCeEEEeCCChHHHHHHHHHcCCcccc--ceeE--eecc-CCCCCCCCCCCCCcccccCCcccc
Q 027403           56 KPDPVLRNLLLSMP--QRKIIFTNADQKHAMEVLGRLGLEDCF--EGII--CFET-INPRLQPADNTDGIENNSFSSNQR  128 (224)
Q Consensus        56 ~~~~g~~~~L~~l~--~~~~I~Tn~~~~~~~~~l~~lgl~~~f--d~ii--~~~~-~~~~~~~~~~~~~~~~~~~~~~~~  128 (224)
                      ..-||+.++|+.+.  +.++|.|.+...++..+++.++....+  ...+  .++. +...                    
T Consensus       164 ~~RP~l~eFL~~l~~~yeivIfTas~~~ya~~vld~Ld~~~~~~~~~~~~r~~~~~~~~~--------------------  223 (320)
T 3shq_A          164 LMRPYLHEFLTSAYEDYDIVIWSATSMRWIEEKMRLLGVASNDNYKVMFYLDSTAMISVH--------------------  223 (320)
T ss_dssp             HBCTTHHHHHHHHHHHEEEEEECSSCHHHHHHHHHHTTCTTCSSCCCCEEECGGGCEEEE--------------------
T ss_pred             EeCCCHHHHHHHHHhCCEEEEEcCCcHHHHHHHHHHhCCCCCcceeEEEEEcCCcccccc--------------------
Confidence            35689999999997  899999999999999999999876553  2212  1211 1000                    


Q ss_pred             ccCCCCHHHHHHHHHHh-----CCCCCcEEEEeCChhcHHHHHHcCCe
Q 027403          129 ILCKPSLEAIETAIRIA-----NVDPKKTIFFDDSARNIASAKAAGLH  171 (224)
Q Consensus       129 ~~~KP~~~~~~~al~~~-----~~~~~~~l~VgDs~~Di~~A~~~G~~  171 (224)
                        .+.+...|..-++.+     |.++++|++|+|++.-....-..|+.
T Consensus       224 --~~~~g~~~vKdLs~Lw~~~p~rdl~~tIiIDdsp~~~~~~p~NgI~  269 (320)
T 3shq_A          224 --VPERGVVDVKPLGVIWALYKQYNSSNTIMFDDIRRNFLMNPKSGLK  269 (320)
T ss_dssp             --ETTTEEEEECCHHHHHHHCTTCCGGGEEEEESCGGGGTTSGGGEEE
T ss_pred             --ccCCCCEEEEEhHHhhcccCCCChhHEEEEeCChHHhccCcCceEE
Confidence              011111233445555     88999999999999876665555544

>3b8c_A ATPase 2, plasma membrane-type; P-type ATPase, proton pump, ATP-binding, hydrogen ION transport, hydrolase, ION transport; HET: ACP; 3.60A {Arabidopsis thaliana}

Probab=94.51  E-value=0.011  Score=58.70  Aligned_cols=132  Identities=12%  Similarity=0.111  Sum_probs=76.0

Q ss_pred             CCChhHHHHHhcCC---CCeEEEeCCChHHHHHHHHHcCCcc-ccc-eeEeeccCCCCCCCCCCCCCccccc----CCcc
Q 027403           56 KPDPVLRNLLLSMP---QRKIIFTNADQKHAMEVLGRLGLED-CFE-GIICFETINPRLQPADNTDGIENNS----FSSN  126 (224)
Q Consensus        56 ~~~~g~~~~L~~l~---~~~~I~Tn~~~~~~~~~l~~lgl~~-~fd-~ii~~~~~~~~~~~~~~~~~~~~~~----~~~~  126 (224)
                      ++.|++++.++.|+   .+++++|+-...-+..+-+.+|+.. .++ .+++..+....      .+..+-+.    ....
T Consensus       488 p~R~~a~~aI~~l~~aGI~v~MiTGD~~~tA~~iA~~lGi~~~~~~~~~l~g~~~~~~------~~~~~l~~~~~~~~v~  561 (885)
T 3b8c_A          488 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGTHKDAN------LASIPVEELIEKADGF  561 (885)
T ss_dssp             CCCHHHHHHHHHHHHTTCCCEEEESSCHHHHTHHHHTTTCTTCCSTTSSCCBGGGGTT------SCCSCHHHHHHTSCCE
T ss_pred             ccchhHHHHHHHHHHcCCcEEEEcCCChHHHHHHHHHhCCccccCCcceeeccccccc------cchhHHHHHHhhCcEE
Confidence            56789999998886   7889999999998999999999853 111 12221111000      00000000    0001


Q ss_pred             ccccCCCCHHHHHHHHHHhCCCCCcEEEEeCChhcHHHHHHcCCeEEEECCCCC--CCCCceEeC--CHhHHHHHH
Q 027403          127 QRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP--VPPADHALN--SIHNIKEAI  198 (224)
Q Consensus       127 ~~~~~KP~~~~~~~al~~~~~~~~~~l~VgDs~~Di~~A~~~G~~~v~v~~~~~--~~~~d~~i~--~~~dl~~~i  198 (224)
                      .+..++-|..+.+ .+++.|   ..|.|+||+.||..+-+.+++. +.+..+..  ..-+|+++.  ++..+.+.+
T Consensus       562 arv~P~~K~~iV~-~lq~~g---~~Vam~GDGvNDapaLk~AdvG-IAmg~gtd~ak~aADivl~~~~~~~I~~ai  632 (885)
T 3b8c_A          562 AGVFPEHKYEIVK-KLQERK---HIVGMTGDGVNDAPALKKADIG-IAVADATDAARGASDIVLTEPGLSVIISAV  632 (885)
T ss_dssp             ECCCHHHHHHHHH-HHHHTT---CCCCBCCCSSTTHHHHHHSSSC-CCCSSSHHHHGGGCSSCCSSCSHHHHTHHH
T ss_pred             EEECHHHHHHHHH-HHHHCC---CeEEEEcCCchhHHHHHhCCEe-EEeCCccHHHHHhcceeeccCchhHHHHHH
Confidence            1111122233333 333333   6799999999999999999885 55554432  344777763  476666555

>3geb_A EYES absent homolog 2; hydrolase, activator, alternative splicing, cytoplasm, developmental protein, magnesium, nucleus, polymorphism; 2.40A {Homo sapiens} PDB: 3hb0_A 3hb1_A

Probab=94.10  E-value=0.31  Score=41.57  Aligned_cols=80  Identities=13%  Similarity=0.101  Sum_probs=63.3

Q ss_pred             CeEEEeCCChHHHHHHHHHcCCccccce--eEeeccCCCCCCCCCCCCCcccccCCccccccCCCCHHHHHHHHHHhCCC
Q 027403           71 RKIIFTNADQKHAMEVLGRLGLEDCFEG--IICFETINPRLQPADNTDGIENNSFSSNQRILCKPSLEAIETAIRIANVD  148 (224)
Q Consensus        71 ~~~I~Tn~~~~~~~~~l~~lgl~~~fd~--ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~~~~~~~al~~~~~~  148 (224)
                      -.+++|++.---....+--+|+..+|..  |+++..++                           +..-|+.+.+++| +
T Consensus       178 vNVLVTs~qLVPaLaK~LLygL~~~fpieNIYSa~kiG---------------------------KesCFerI~~RFG-~  229 (274)
T 3geb_A          178 VNVLVTTTQLIPALAKVLLYGLGSVFPIENIYSATKTG---------------------------KESCFERIMQRFG-R  229 (274)
T ss_dssp             EEEEEESSCHHHHHHHHHHTTCTTTSCGGGEEETTTTC---------------------------HHHHHHHHHHHHC-T
T ss_pred             eEEEEecCchHHHHHHHHHhhcccceecccccchhhcC---------------------------HHHHHHHHHHHhC-C
Confidence            3668898876555556667888888874  77776543                           6789999999998 3


Q ss_pred             CCcEEEEeCChhcHHHHHHcCCeEEEECCC
Q 027403          149 PKKTIFFDDSARNIASAKAAGLHTVIVGSS  178 (224)
Q Consensus       149 ~~~~l~VgDs~~Di~~A~~~G~~~v~v~~~  178 (224)
                      .-.-+.|||+..--++|+.++++++-|...
T Consensus       230 k~~yvvIGDG~eEe~AAk~~n~PFwrI~~h  259 (274)
T 3geb_A          230 KAVYVVIGDGVEEEQGAKKHNMPFWRISCH  259 (274)
T ss_dssp             TSEEEEEESSHHHHHHHHHTTCCEEECCSH
T ss_pred             CceEEEECCCHHHHHHHHHcCCCeEEeecC
Confidence            356788999999999999999999888653

>3ef1_A RNA polymerase II subunit A C-terminal domain phosphatase; CTD, FCPH, BRCT, hydrolase, BEF3, acylphosphate analog, cobalt, magnesium; HET: BFD; 2.15A {Schizosaccharomyces pombe}

Probab=93.59  E-value=0.038  Score=50.78  Aligned_cols=77  Identities=19%  Similarity=0.233  Sum_probs=58.1

Q ss_pred             CCCChhHHHHHhcCC--CCeEEEeCCChHHHHHHHHHcCCcc-ccce-eEeeccCCCCCCCCCCCCCcccccCCcccccc
Q 027403           55 LKPDPVLRNLLLSMP--QRKIIFTNADQKHAMEVLGRLGLED-CFEG-IICFETINPRLQPADNTDGIENNSFSSNQRIL  130 (224)
Q Consensus        55 ~~~~~g~~~~L~~l~--~~~~I~Tn~~~~~~~~~l~~lgl~~-~fd~-ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  130 (224)
                      +..-||+.++|+.+.  +.++|.|.+.+.++..+++.++... +|.. +++-++.+..                     .
T Consensus        82 V~~RPgl~eFL~~ls~~yEivIfTas~~~YA~~Vl~~LDp~~~~f~~Rl~sRd~cg~~---------------------~  140 (442)
T 3ef1_A           82 IKFRPGLAQFLQKISELYELHIYTMGTKAYAKEVAKIIDPTGKLFQDRVLSRDDSGSL---------------------A  140 (442)
T ss_dssp             EEECTTHHHHHHHHTTTEEEEEECSSCHHHHHHHHHHHCTTSTTTTTCEECTTTSSCS---------------------S
T ss_pred             EEeCCCHHHHHHHHhCCcEEEEEcCCCHHHHHHHHHHhccCCccccceEEEecCCCCc---------------------e
Confidence            466799999999998  7899999999999999999999876 7876 4443332210                     0


Q ss_pred             CCCCHHHHHHHHHH-hCCCCCcEEEEeCChh
Q 027403          131 CKPSLEAIETAIRI-ANVDPKKTIFFDDSAR  160 (224)
Q Consensus       131 ~KP~~~~~~~al~~-~~~~~~~~l~VgDs~~  160 (224)
                      -|-        +++ +|.+.+++++|+|++.
T Consensus       141 ~Kd--------L~~ll~rdl~~vvIIDd~p~  163 (442)
T 3ef1_A          141 QKS--------LRRLFPCDTSMVVVIDDRGD  163 (442)
T ss_dssp             CCC--------GGGTCSSCCTTEEEEESCSG
T ss_pred             eee--------hHHhcCCCcceEEEEECCHH
Confidence            121        333 3788899999999984

>3kc2_A Uncharacterized protein YKR070W; HAD-like, mitochondral protein, PSI, MCSG, structural genomi protein structure initiative; HET: MSE; 1.55A {Saccharomyces cerevisiae} PDB: 3rf6_A*

Probab=88.24  E-value=0.92  Score=40.04  Aligned_cols=85  Identities=16%  Similarity=0.150  Sum_probs=58.5

Q ss_pred             CCCCChhHHHHHhcCC---CCeEEEeCCC---hHHHHHHHH-HcCCccccceeEeeccCCCCCCCCCCCCCcccccCCcc
Q 027403           54 KLKPDPVLRNLLLSMP---QRKIIFTNAD---QKHAMEVLG-RLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSN  126 (224)
Q Consensus        54 ~~~~~~g~~~~L~~l~---~~~~I~Tn~~---~~~~~~~l~-~lgl~~~fd~ii~~~~~~~~~~~~~~~~~~~~~~~~~~  126 (224)
                      .-.++||+.++|+.|+   .+++++||++   .......|. .+|+.--.+.|+++......                  
T Consensus        27 g~~~~p~a~~~l~~l~~~g~~~~~vTNn~~~~~~~~~~~l~~~lgi~~~~~~i~ts~~~~~~------------------   88 (352)
T 3kc2_A           27 GKKPIAGASDALKLLNRNKIPYILLTNGGGFSERARTEFISSKLDVDVSPLQIIQSHTPYKS------------------   88 (352)
T ss_dssp             TTEECTTHHHHHHHHHHTTCCEEEECSCCSSCHHHHHHHHHHHHTSCCCGGGEECTTGGGGG------------------
T ss_pred             CCeeCcCHHHHHHHHHHCCCEEEEEeCCCCCCchHHHHHHHHhcCCCCChhhEeehHHHHHH------------------
Confidence            3467899998888885   7899999986   344555555 69987667788887754331                  


Q ss_pred             ccccCCCCHHHHHHHHHHhCCCCCcEEEEeCChhcHHHHHHcCCeEEEE
Q 027403          127 QRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIV  175 (224)
Q Consensus       127 ~~~~~KP~~~~~~~al~~~~~~~~~~l~VgDs~~Di~~A~~~G~~~v~v  175 (224)
                                    .++    ..+.+++||-. .-...+++.|+..+..
T Consensus        89 --------------~~~----~~~~v~viG~~-~l~~~l~~~G~~~v~~  118 (352)
T 3kc2_A           89 --------------LVN----KYSRILAVGTP-SVRGVAEGYGFQDVVH  118 (352)
T ss_dssp             --------------GTT----TCSEEEEESST-THHHHHHHHTCSEEEE
T ss_pred             --------------HHh----cCCEEEEECCH-HHHHHHHhCCCeEecc
Confidence                          000    23678888865 4556677889987753

>2fue_A PMM 1, PMMH-22, phosphomannomutase 1; enzyme-product complex, protein glycosyl carbohydrate-deficient glycoprotein syndrome; HET: MSE M1P; 1.75A {Homo sapiens} SCOP: c.108.1.10 PDB: 2fuc_A*

Probab=86.83  E-value=0.81  Score=37.84  Aligned_cols=43  Identities=9%  Similarity=-0.008  Sum_probs=35.2

Q ss_pred             CCCHHHHHHHHHHhCCCCCcEEEEeC----ChhcHHHHHHcCCeEEEECC
Q 027403          132 KPSLEAIETAIRIANVDPKKTIFFDD----SARNIASAKAAGLHTVIVGS  177 (224)
Q Consensus       132 KP~~~~~~~al~~~~~~~~~~l~VgD----s~~Di~~A~~~G~~~v~v~~  177 (224)
                      -.+......+   +|+++++++.|||    +.||+..-..+|...+.+.+
T Consensus       196 vsKg~al~~l---~gi~~~~viafGDs~~~~~NDi~Ml~~~~~~g~av~N  242 (262)
T 2fue_A          196 WDKRYCLDSL---DQDSFDTIHFFGNETSPGGNDFEIFADPRTVGHSVVS  242 (262)
T ss_dssp             CSTTHHHHHH---TTSCCSEEEEEESCCSTTSTTHHHHHSTTSEEEECSS
T ss_pred             CCHHHHHHHH---HCCCHHHEEEECCCCCCCCCCHHHHhcCccCcEEecC
Confidence            4455566666   8999999999999    99999999999987777744

>1zjj_A Hypothetical protein PH1952; alpha/beta hydrolase fold, HAD superfamily, structural genom riken structural genomics/proteomics initiative; 1.85A {Pyrococcus horikoshii}

Probab=83.51  E-value=1.2  Score=36.56  Aligned_cols=47  Identities=21%  Similarity=0.167  Sum_probs=33.9

Q ss_pred             CChhHHHHHhcCC---CCeEEEeCCCh---HHHHHHHHHcCCccccceeEeec
Q 027403           57 PDPVLRNLLLSMP---QRKIIFTNADQ---KHAMEVLGRLGLEDCFEGIICFE  103 (224)
Q Consensus        57 ~~~g~~~~L~~l~---~~~~I~Tn~~~---~~~~~~l~~lgl~~~fd~ii~~~  103 (224)
                      +.|++.++|++++   .+++++||++.   ..+...+..+|+....+.++++.
T Consensus        18 ~~~~~~~~l~~l~~~g~~~~~~T~r~~~~~~~~~~~l~~lg~~~~~~~i~~~~   70 (263)
T 1zjj_A           18 AIPGVRELIEFLKERGIPFAFLTNNSTKTPEMYREKLLKMGIDVSSSIIITSG   70 (263)
T ss_dssp             ECTTHHHHHHHHHHHTCCEEEEESCCSSCHHHHHHHHHTTTCCCCGGGEEEHH
T ss_pred             eCccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHCCCCCChhhEEecH
Confidence            4578888888885   78999999875   44555566678865566777654

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	224
d1o08a_	221	c.108.1.6 (A:) beta-Phosphoglucomutase {Lactococcu	4e-08
d2g80a1	225	c.108.1.22 (A:17-241) Protein UTR4 {Baker's yeast	6e-08
d1qyia_	380	c.108.1.13 (A:) Hypothetical protein MW1667 (SA154	7e-08
d2b0ca1	197	c.108.1.2 (A:8-204) Putative phosphatase YihX {Esc	1e-06
d1zs9a1	253	c.108.1.22 (A:4-256) E-1 enzyme {Human(Homo sapien	2e-06
d1u7pa_	164	c.108.1.17 (A:) Magnesium-dependent phosphatase-1,	5e-06
d2fdra1	222	c.108.1.6 (A:3-224) Hypothetical protein Atu0790 {	6e-06
d1cr6a1	222	c.108.1.2 (A:4-225) Epoxide hydrolase, N-terminal	8e-06
d1te2a_	218	c.108.1.6 (A:) Phosphatase YniC {Escherichia coli	2e-05
d1qq5a_	245	c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Xan	2e-05
d1zd3a1	225	c.108.1.2 (A:2-224) Epoxide hydrolase, N-terminal	2e-05
d2go7a1	204	c.108.1.6 (A:3-206) Hypothetical protein SP2064 {S	4e-05
d2fi1a1	187	c.108.1.3 (A:4-190) Putative hydrolase SP0805 {Str	2e-04
d2o2xa1	209	c.108.1.19 (A:8-216) Hypothetical protein Mll2559	5e-04
d2feaa1	226	c.108.1.20 (A:2-227) 2-hydroxy-3-keto-5-methylthio	6e-04
d2hdoa1	207	c.108.1.6 (A:1-207) Phosphoglycolate phosphatase {	0.001
d2fpwa1	161	c.108.1.19 (A:3-163) Histidine biosynthesis bifunc	0.002
d2hcfa1	228	c.108.1.6 (A:2-229) Hypothetical protein CT1708 {C	0.003

>d1o08a_ c.108.1.6 (A:) beta-Phosphoglucomutase {Lactococcus lactis [TaxId: 1358]} Length = 221

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: beta-Phosphoglucomutase
species: Lactococcus lactis [TaxId: 1358]

 Score = 49.8 bits (117), Expect = 4e-08
 Identities = 20/110 (18%), Positives = 36/110 (32%), Gaps = 1/110 (0%)

Query: 95  CFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCKPSLEAIETAIRIANVDPKKTIF 154
               +       P L    N  G  +      +    KP+ +    A     V P ++I 
Sbjct: 108 IKIALASASKNGPFLLERMNLTGYFDAIADPAEVAASKPAPDIFIAAAHAVGVAPSESIG 167

Query: 155 FDDSARNIASAKAAGLHTVIVGSSVPVPPADHALNSIHNIK-EAIPEIWE 203
            +DS   I + K +G   + VG    +      +    +   E + E+W 
Sbjct: 168 LEDSQAGIQAIKDSGALPIGVGRPEDLGDDIVIVPDTSHYTLEFLKEVWL 217

>d2g80a1 c.108.1.22 (A:17-241) Protein UTR4 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 225

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Enolase-phosphatase E1
domain: Protein UTR4
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 49.4 bits (116), Expect = 6e-08
 Identities = 23/200 (11%), Positives = 52/200 (26%), Gaps = 28/200 (14%)

Query: 1   MSQHLHIDESEVPRMCLELYREHGTTMAGLKAVGYEFDNDEFHAFVHGKLP---YEKLKP 57
           +SQ    ++ ++    LEL  +        +  GY + +      +   +     + +K 
Sbjct: 49  LSQFHIDNKEQLQAHILELVAKDVKDPILKQLQGYVWAHGYESGQIKAPVYADAIDFIKR 108

Query: 58  DPVLRNLLLSMPQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDG 117
              +        + + +     Q         L L    +G     T             
Sbjct: 109 KKRVFIYSSGSVKAQKLLFGYVQDPNAPAHDSLDLNSYIDGYFDINTSGK---------- 158

Query: 118 IENNSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGS 177
                         K   ++    +R       + +F  D+   + +A   G+ T +   
Sbjct: 159 --------------KTETQSYANILRDIGAKASEVLFLSDNPLELDAAAGVGIATGLASR 204

Query: 178 SVPVPPAD-HALNSIHNIKE 196
               P  D        N + 
Sbjct: 205 PGNAPVPDGQKYQVYKNFET 224

>d1qyia_ c.108.1.13 (A:) Hypothetical protein MW1667 (SA1546) {Staphylococcus aureus [TaxId: 1280]} Length = 380

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Hypothetical protein MW1667 (SA1546)
domain: Hypothetical protein MW1667 (SA1546)
species: Staphylococcus aureus [TaxId: 1280]

 Score = 49.8 bits (118), Expect = 7e-08
 Identities = 29/212 (13%), Positives = 62/212 (29%), Gaps = 20/212 (9%)

Query: 9   ESEVPRMCLELYREHGTTMAGLKAVGYEFDNDEF-HAFVHGKLPYEKLKPDPVLRNLLLS 67
           +  +  +  E+Y+E        + V  +     F   +++ ++    L+P   ++ LL  
Sbjct: 170 KGALWTLAQEVYQEWYLGSKLYEDVEKKIARTTFKTGYIYQEII---LRPVDEVKVLLND 226

Query: 68  MPQRKI---IFTNADQKHAMEVLGRLGLEDCFEGIICF---ETINPRLQPADNTDGIENN 121
           +        I T       +     LGL   FE        + +             + N
Sbjct: 227 LKGAGFELGIATGRPYTETVVPFENLGLLPYFEADFIATASDVLEAENMYPQARPLGKPN 286

Query: 122 SFSSNQ-RILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIV----G 176
            FS                   +   V+        DS  ++ SA+  G   +       
Sbjct: 287 PFSYIAALYGNNRDKYESYINKQDNIVNKDDVFIVGDSLADLLSAQKIGATFIGTLTGLK 346

Query: 177 SSVPVPP-----ADHALNSIHNIKEAIPEIWE 203
                       AD+ +N +  ++  +  + E
Sbjct: 347 GKDAAGELEAHHADYVINHLGELRGVLDNLLE 378

>d2b0ca1 c.108.1.2 (A:8-204) Putative phosphatase YihX {Escherichia coli [TaxId: 562]} Length = 197

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: YihX-like
domain: Putative phosphatase YihX
species: Escherichia coli [TaxId: 562]

 Score = 45.5 bits (106), Expect = 1e-06
 Identities = 23/153 (15%), Positives = 47/153 (30%), Gaps = 7/153 (4%)

Query: 37  FDNDEFHAFVHGKLPYEKLKPDPVLRNLLLSMPQRKIIFTNADQKHAMEVLGRLGLEDCF 96
              + FH    G++  E           L    ++      A        +  +  +   
Sbjct: 39  HMGEAFHQHERGEISDEAFAEALCHEMALPLSYEQFSHGWQAVFVALRPEVIAIMHKLRE 98

Query: 97  EGI-------ICFETINPRLQPADNTDGIENNSFSSNQRILCKPSLEAIETAIRIANVDP 149
           +G                  +         ++ + S    + KP     +  ++     P
Sbjct: 99  QGHRVVVLSNTNRLHTTFWPEEYPEIRDAADHIYLSQDLGMRKPEARIYQHVLQAEGFSP 158

Query: 150 KKTIFFDDSARNIASAKAAGLHTVIVGSSVPVP 182
             T+FFDD+A NI  A   G+ +++V     +P
Sbjct: 159 SDTVFFDDNADNIEGANQLGITSILVKDKTTIP 191

>d1zs9a1 c.108.1.22 (A:4-256) E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]} Length = 253

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Enolase-phosphatase E1
domain: E-1 enzyme
species: Human(Homo sapiens) [TaxId: 9606]

 Score = 45.2 bits (105), Expect = 2e-06
 Identities = 17/139 (12%), Positives = 37/139 (26%), Gaps = 25/139 (17%)

Query: 61  LRNLLLSMPQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIEN 120
                     +  I+++   +    + G     D  E +                     
Sbjct: 135 AVRKWREAGMKVYIYSSGSVEAQKLLFGHSTEGDILELVDG------------------- 175

Query: 121 NSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIV---GS 177
                + +I  K   E+               +F  D  R  ++A+ A +H  +V   G+
Sbjct: 176 ---HFDTKIGHKVESESYRKIADSIGCSTNNILFLTDVTREASAAEEADVHVAVVVRPGN 232

Query: 178 SVPVPPADHALNSIHNIKE 196
           +          + I +  E
Sbjct: 233 AGLTDDEKTYYSLITSFSE 251

>d1u7pa_ c.108.1.17 (A:) Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mus musculus) [TaxId: 10090]} Length = 164

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Magnesium-dependent phosphatase-1, Mdp1
domain: Magnesium-dependent phosphatase-1, Mdp1
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 42.9 bits (100), Expect = 5e-06
 Identities = 18/110 (16%), Positives = 32/110 (29%), Gaps = 2/110 (1%)

Query: 81  KHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCKPSLEAIET 140
               EVLGRL               +         +  +   +   + I     +   E 
Sbjct: 49  PEVPEVLGRLQSLGVPVAAAS--RTSEIQGANQLLELFDLGKYFIQREIYPGSKVTHFER 106

Query: 141 AIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVPVPPADHALNS 190
                 V   + +FFDD  RNI      G+  + +   + +      L +
Sbjct: 107 LHHKTGVPFSQMVFFDDENRNIIDVGRLGVTCIHIRDGMSLQTLTQGLET 156

>d2fdra1 c.108.1.6 (A:3-224) Hypothetical protein Atu0790 {Agrobacterium tumefaciens [TaxId: 358]} Length = 222

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: Hypothetical protein Atu0790
species: Agrobacterium tumefaciens [TaxId: 358]

 Score = 43.3 bits (100), Expect = 6e-06
 Identities = 30/195 (15%), Positives = 56/195 (28%), Gaps = 21/195 (10%)

Query: 30  LKAVGYEFDNDEFHAFVHGKLPYEKLKPD-----PVLRNLLLSMPQRKIIFTNADQKHAM 84
           L   GY    +E      G      L          L   LL   ++ +          +
Sbjct: 28  LTEAGYPISVEEMGERFAGMTWKNILLQVESEASIPLSASLLDKSEKLLDMRLERDVKII 87

Query: 85  EVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENN------SFSSNQRILCKPSLEAI 138
           + +            IC  + + RL       G++        S         KP  +  
Sbjct: 88  DGVKFALSRLTTPRCICSNSSSHRLDMMLTKVGLKPYFAPHIYSAKDLGADRVKPKPDIF 147

Query: 139 ETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVPVPP----------ADHAL 188
                   V P + +  +DS   I  A+AAG+  +    +    P          A+  +
Sbjct: 148 LHGAAQFGVSPDRVVVVEDSVHGIHGARAAGMRVIGFTGASHTYPSHADRLTDAGAETVI 207

Query: 189 NSIHNIKEAIPEIWE 203
           + + ++   I  + E
Sbjct: 208 SRMQDLPAVIAAMAE 222

>d1cr6a1 c.108.1.2 (A:4-225) Epoxide hydrolase, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]} Length = 222

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: YihX-like
domain: Epoxide hydrolase, N-terminal domain
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 43.2 bits (100), Expect = 8e-06
 Identities = 18/155 (11%), Positives = 45/155 (29%), Gaps = 31/155 (20%)

Query: 31  KAVGYEFDNDEFHAFVHGKLPYEKLKPDPVLRNLLLSMPQRKII-------FTNADQKHA 83
           KA G     +   + +  +        +  +    +++ ++          + +   K  
Sbjct: 73  KACGANLPENFSISQIFSQA-MAARSINRPMLQAAIALKKKGFTTCIVTNNWLDDGDKRD 131

Query: 84  MEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCKPSLEAIETAIR 143
                   L   F+ +I    +                          KP  +     + 
Sbjct: 132 SLAQMMCELSQHFDFLIESCQVGMI-----------------------KPEPQIYNFLLD 168

Query: 144 IANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSS 178
                P + +F DD   N+  A+  G+ T++V ++
Sbjct: 169 TLKAKPNEVVFLDDFGSNLKPARDMGMVTILVHNT 203

>d1te2a_ c.108.1.6 (A:) Phosphatase YniC {Escherichia coli [TaxId: 562]} Length = 218

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: Phosphatase YniC
species: Escherichia coli [TaxId: 562]

 Score = 42.1 bits (97), Expect = 2e-05
 Identities = 12/59 (20%), Positives = 26/59 (44%), Gaps = 5/59 (8%)

Query: 141 AIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVPVPP-----ADHALNSIHNI 194
                 VDP   +  +DS   + ++KAA + +++V +           A+  L+S+  +
Sbjct: 153 CAAKLGVDPLTCVALEDSVNGMIASKAARMRSIVVPAPEAQNDPRFVLANVKLSSLTEL 211

>d1qq5a_ c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Xanthobacter autotrophicus [TaxId: 280]} Length = 245

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: HAD-related
domain: L-2-Haloacid dehalogenase, HAD
species: Xanthobacter autotrophicus [TaxId: 280]

 Score = 42.1 bits (97), Expect = 2e-05
 Identities = 12/87 (13%), Positives = 25/87 (28%)

Query: 89  RLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCKPSLEAIETAIRIANVD 148
            L              +   L          +   S + + + KP  ++      +  V 
Sbjct: 104 ELAPLKRAILSNGAPDMLQALVANAGLTDSFDAVISVDAKRVFKPHPDSYALVEEVLGVT 163

Query: 149 PKKTIFFDDSARNIASAKAAGLHTVIV 175
           P + +F   +  ++  AK  G     V
Sbjct: 164 PAEVLFVSSNGFDVGGAKNFGFSVARV 190

>d1zd3a1 c.108.1.2 (A:2-224) Epoxide hydrolase, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 225

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: YihX-like
domain: Epoxide hydrolase, N-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 41.7 bits (96), Expect = 2e-05
 Identities = 25/179 (13%), Positives = 48/179 (26%), Gaps = 27/179 (15%)

Query: 1   MSQHLHIDESEVPRMCLELYREHGTTMAGLKAVGYEFDNDEFHAFVHGKLPYEKLKPDPV 60
            +    +         + L  E+    +    V    +      F       +  +P   
Sbjct: 47  GATTRLMKGEITLSQWIPLMEENCRKCSETAKVCLPKNFSIKEIFDKAISARKINRPMLQ 106

Query: 61  LRNLLLSMPQRKIIFTNADQKHAMEVLGR----LGLEDCFEGIICFETINPRLQPADNTD 116
              +L        I TN       E  G       L+  F+ +I    +           
Sbjct: 107 AALMLRKKGFTTAILTNTWLDDRAERDGLAQLMCELKMHFDFLIESCQVGMV-------- 158

Query: 117 GIENNSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIV 175
                          KP  +  +  +      P + +F DD   N+  A+  G+ T++V
Sbjct: 159 ---------------KPEPQIYKFLLDTLKASPSEVVFLDDIGANLKPARDLGMVTILV 202

>d2go7a1 c.108.1.6 (A:3-206) Hypothetical protein SP2064 {Streptococcus pneumoniae [TaxId: 1313]} Length = 204

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: Hypothetical protein SP2064
species: Streptococcus pneumoniae [TaxId: 1313]

 Score = 40.6 bits (93), Expect = 4e-05
 Identities = 6/58 (10%), Positives = 22/58 (37%), Gaps = 2/58 (3%)

Query: 142 IRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVPVPPADHALNSIHNIKEAIP 199
           +    ++   T +  D   ++  A+ +G+ ++           +H + ++ +I     
Sbjct: 147 LDKYQLNSDNTYYIGDRTLDVEFAQNSGIQSINFLE--STYEGNHRIQALADISRIFE 202

>d2fi1a1 c.108.1.3 (A:4-190) Putative hydrolase SP0805 {Streptococcus pneumoniae [TaxId: 1313]} Length = 187

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Phosphonoacetaldehyde hydrolase-like
domain: Putative hydrolase SP0805
species: Streptococcus pneumoniae [TaxId: 1313]

 Score = 38.5 bits (88), Expect = 2e-04
 Identities = 24/175 (13%), Positives = 51/175 (29%), Gaps = 19/175 (10%)

Query: 30  LKAVGYEFDNDEFHAFVHGKLPYEKLKPDPVLRNLLLSMPQRKIIFTNADQ---KHAMEV 86
           L   G   D+D  +  +    P+      P L N L    + +             +  +
Sbjct: 29  LALYGITQDHDSVYQALKVSTPFAIETFAPNLENFLEKYKENEARELEHPILFEGVSDLL 88

Query: 87  LGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCKPSLEAIETAIRIAN 146
                       +         +    +         +S+     KP+ E++        
Sbjct: 89  EDISNQGGRHFLVSHRNDQVLEILEKTSIAAYFTEVVTSSSGFKRKPNPESMLYLREKYQ 148

Query: 147 VDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVPVPPADHALNSIHNIKEAIPEI 201
           +     +   D   +I + +AAGL T +               SI N+++ + +I
Sbjct: 149 ISS--GLVIGDRPIDIEAGQAAGLDTHLF-------------TSIVNLRQ-VLDI 187

>d2o2xa1 c.108.1.19 (A:8-216) Hypothetical protein Mll2559 {Mesorhizobium loti [TaxId: 381]} Length = 209

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Histidinol phosphatase-like
domain: Hypothetical protein Mll2559
species: Mesorhizobium loti [TaxId: 381]

 Score = 37.6 bits (86), Expect = 5e-04
 Identities = 8/53 (15%), Positives = 20/53 (37%)

Query: 146 NVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVPVPPADHALNSIHNIKEAI 198
            +D ++++   D   ++ + K AGL    +           A+  + +  E  
Sbjct: 143 ALDLQRSLIVGDKLADMQAGKRAGLAQGWLVDGEAAVQPGFAIRPLRDSSELG 195

>d2feaa1 c.108.1.20 (A:2-227) 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX {Bacillus subtilis [TaxId: 1423]} Length = 226

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: MtnX-like
domain: 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX
species: Bacillus subtilis [TaxId: 1423]

 Score = 37.7 bits (86), Expect = 6e-04
 Identities = 18/156 (11%), Positives = 41/156 (26%), Gaps = 16/156 (10%)

Query: 52  YEKLKPDPVLRNLLLSMPQRKI---IFTNADQKHAMEVLGRLGLEDCFEGIICFETINPR 108
            E  K     R  +  + + +I   + +         +L  +  +D              
Sbjct: 71  LEDAKIREGFREFVAFINEHEIPFYVISGGMDFFVYPLLEGIVEKDRIYCNHAS------ 124

Query: 109 LQPADNTDGIENNSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAA 168
                + D I  +   S +            + I   +   +  I   DS  ++ +AK +
Sbjct: 125 ----FDNDYIHIDWPHSCKGTCSNQCGCCKPSVIHELSEPNQYIIMIGDSVTDVEAAKLS 180

Query: 169 GLHTVIVGSSVPV---PPADHALNSIHNIKEAIPEI 201
            L                        + I++ I  +
Sbjct: 181 DLCFARDYLLNECREQNLNHLPYQDFYEIRKEIENV 216

>d2hdoa1 c.108.1.6 (A:1-207) Phosphoglycolate phosphatase {Lactobacillus plantarum [TaxId: 1590]} Length = 207

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: Phosphoglycolate phosphatase
species: Lactobacillus plantarum [TaxId: 1590]

 Score = 36.8 bits (83), Expect = 0.001
 Identities = 12/55 (21%), Positives = 21/55 (38%), Gaps = 4/55 (7%)

Query: 146 NVDPKKTIFFDDSARNIASAKAAGLHTVIV----GSSVPVPPADHALNSIHNIKE 196
           NV P+  +F  DS  +  +A+AA +   +       +       H      +I E
Sbjct: 151 NVAPQNALFIGDSVSDEQTAQAANVDFGLAVWGMDPNADHQKVAHRFQKPLDILE 205

>d2fpwa1 c.108.1.19 (A:3-163) Histidine biosynthesis bifunctional protein HisB, phosphatase domain {Escherichia coli [TaxId: 562]} Length = 161

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Histidinol phosphatase-like
domain: Histidine biosynthesis bifunctional protein HisB, phosphatase domain
species: Escherichia coli [TaxId: 562]

 Score = 35.6 bits (81), Expect = 0.002
 Identities = 17/126 (13%), Positives = 44/126 (34%), Gaps = 2/126 (1%)

Query: 52  YEKLKPDPVLRNLLLSMPQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQP 111
           ++KL  +P +   LL + +           +   +  +   +  F+G           Q 
Sbjct: 26  FDKLAFEPGVIPQLLKLQKAGYKLVM--ITNQDGLGTQSFPQADFDGPHNLMMQIFTSQG 83

Query: 112 ADNTDGIENNSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLH 171
               + +      +++    KP ++ +E  +    +D   +    D A +I  A+  G++
Sbjct: 84  VQFDEVLICPHLPADECDCRKPKVKLVERYLAEQAMDRANSYVIGDRATDIQLAENMGIN 143

Query: 172 TVIVGS 177
            +    
Sbjct: 144 GLRYDR 149

>d2hcfa1 c.108.1.6 (A:2-229) Hypothetical protein CT1708 {Chlorobium tepidum [TaxId: 1097]} Length = 228

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: Hypothetical protein CT1708
species: Chlorobium tepidum [TaxId: 1097]

 Score = 35.1 bits (79), Expect = 0.003
 Identities = 9/63 (14%), Positives = 20/63 (31%), Gaps = 6/63 (9%)

Query: 145 ANVDPKKTIFFDDSARNIASAKAAGLHTVIVGS------SVPVPPADHALNSIHNIKEAI 198
           AN  P + +   D+  +I  A+     ++ V +       +          +     E +
Sbjct: 164 ANYSPSQIVIIGDTEHDIRCARELDARSIAVATGNFTMEELARHKPGTLFKNFAETDEVL 223

Query: 199 PEI 201
             I
Sbjct: 224 ASI 226

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	224
d2hdoa1	207	Phosphoglycolate phosphatase {Lactobacillus planta	99.89
d1x42a1	230	Hypothetical protein PH0459 {Archaeon Pyrococcus h	99.87
d1qq5a_	245	L-2-Haloacid dehalogenase, HAD {Xanthobacter autot	99.87
d1swva_	257	Phosphonoacetaldehyde hydrolase {Bacillus cereus [	99.86
d2hcfa1	228	Hypothetical protein CT1708 {Chlorobium tepidum [T	99.86
d2fdra1	222	Hypothetical protein Atu0790 {Agrobacterium tumefa	99.85
d1te2a_	218	Phosphatase YniC {Escherichia coli [TaxId: 562]}	99.85
d1zrna_	220	L-2-Haloacid dehalogenase, HAD {Pseudomonas sp., s	99.85
d2hsza1	224	Phosphoglycolate phosphatase Gph {Haemophilus somn	99.85
d2ah5a1	210	predicted phosphatase SP0104 {Streptococcus pneumo	99.85
d2gfha1	247	N-acylneuraminate-9-phosphatase NANP {Mouse (Mus m	99.85
d2go7a1	204	Hypothetical protein SP2064 {Streptococcus pneumon	99.84
d1zs9a1	253	E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]}	99.79
d1o08a_	221	beta-Phosphoglucomutase {Lactococcus lactis [TaxId	99.78
d2fi1a1	187	Putative hydrolase SP0805 {Streptococcus pneumonia	99.76
d1qyia_	380	Hypothetical protein MW1667 (SA1546) {Staphylococc	99.7
d1cr6a1	222	Epoxide hydrolase, N-terminal domain {Mouse (Mus m	99.68
d1zd3a1	225	Epoxide hydrolase, N-terminal domain {Human (Homo	99.67
d2gmwa1	182	D,D-heptose 1,7-bisphosphate phosphatase GmhB {Esc	99.67
d2g80a1	225	Protein UTR4 {Baker's yeast (Saccharomyces cerevis	99.66
d2b0ca1	197	Putative phosphatase YihX {Escherichia coli [TaxId	99.66
d1u7pa_	164	Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mu	99.65
d2o2xa1	209	Hypothetical protein Mll2559 {Mesorhizobium loti [	99.65
d2fpwa1	161	Histidine biosynthesis bifunctional protein HisB,	99.58
d2c4na1	250	NagD {Escherichia coli [TaxId: 562]}	99.34
d1vjra_	261	Hypothetical protein TM1742 {Thermotoga maritima [	99.33
d1wvia_	253	Putative phosphatase SMU.1415c {Streptococcus muta	99.32
d2feaa1	226	2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate	99.32
d1yv9a1	253	Putative hydrolase EF1188 {Enterococcus faecalis [	99.27
d1nnla_	217	Phosphoserine phosphatase {Human (Homo sapiens) [T	98.96
d1j97a_	210	Phosphoserine phosphatase {Archaeon Methanococcus	98.8
d1ltqa1	149	Polynucleotide kinase, phosphatase domain {Bacteri	98.77
d1yj5a1	195	5' polynucleotide kinase-3' phosphatase, middle do	98.61
d1k1ea_	177	Probable phosphatase YrbI {Haemophilus influenzae,	98.23
d1wr8a_	230	Phosphoglycolate phosphatase, PGPase {Pyrococcus h	98.17
d1rkua_	206	Homoserine kinase ThrH {Pseudomonas aeruginosa [Ta	98.01
d1l6ra_	225	Phosphoglycolate phosphatase, PGPase {Archaeon The	97.78
d2b8ea1	135	Cation-transporting ATPase {Archaeon Archaeoglobus	97.72
d2b82a1	209	Class B acid phosphatase, AphA {Escherichia coli [	97.64
d1rkqa_	271	Hypothetical protein YidA {Escherichia coli [TaxId	97.61
d2bdea1	458	Cytosolic IMP-GMP specific 5'-nucleotidase {Legion	97.6
d1rlma_	269	Sugar phosphatase SupH (YbiV) {Escherichia coli [T	97.39
d2bdua1	291	Cytosolic 5'-nucleotidase III {Mouse (Mus musculus	97.06
d1nrwa_	285	Hypothetical protein YwpJ {Bacillus subtilis [TaxI	96.8
d1q92a_	195	5'(3')-deoxyribonucleotidase (dNT-2) {Human (Homo	96.78
d2b30a1	283	PFL1270w orthologue {Plasmodium vivax [TaxId: 5855	96.72
d1wpga2	168	Calcium ATPase, catalytic domain P {Rabbit (Orycto	96.64
d1u02a_	229	Trehalose-6-phosphate phosphatase related protein	96.55
d1nf2a_	267	Hypothetical protein TM0651 {Thermotoga maritima [	96.4
d1wzca1	243	Putative mannosyl-3-phosphoglycerate phosphatase M	96.4
d2rbka1	260	Sugar-phosphate phosphatase BT4131 {Bacteroides th	96.33
d1ta0a_	181	Carboxy-terminal domain RNA polymerase II polypept	95.14
d1s2oa1	244	Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc	95.03
d1xvia_	232	Putative mannosyl-3-phosphoglycerate phosphatase M	94.67
d2amya1	243	Phosphomannomutase 2 {Human (Homo sapiens) [TaxId:	85.43
d1y8aa1	308	Hypothetical protein AF1437 {Archaeon Archaeoglobu	85.35

>d2hdoa1 c.108.1.6 (A:1-207) Phosphoglycolate phosphatase {Lactobacillus plantarum [TaxId: 1590]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: Phosphoglycolate phosphatase
species: Lactobacillus plantarum [TaxId: 1590]

Probab=99.89  E-value=1.6e-23  Score=169.92  Aligned_cols=167  Identities=18%  Similarity=0.206  Sum_probs=134.1

Q ss_pred             ccCCCCcccHHHHHHHHHHHhCccHHH-HHHccCC-CCHHHHHHHHhccCC--CCCCCCChhHHHHHhcCC--CCeEEEe
Q 027403            3 QHLHIDESEVPRMCLELYREHGTTMAG-LKAVGYE-FDNDEFHAFVHGKLP--YEKLKPDPVLRNLLLSMP--QRKIIFT   76 (224)
Q Consensus         3 ~~~g~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-~~~~~~~~~~~~~~~--~~~~~~~~g~~~~L~~l~--~~~~I~T   76 (224)
                      +++|++...     +++++.++.+... +...+.. ...+++...+.+.+.  ...++++||+.++|+.|+  ++++|+|
T Consensus        30 ~~~g~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~L~~l~~~~~~~ivT  104 (207)
T d2hdoa1          30 ATYGKPFSP-----AQAQKTFPMAAEQAMTELGIAASEFDHFQAQYEDVMASHYDQIELYPGITSLFEQLPSELRLGIVT  104 (207)
T ss_dssp             HTTTCCCCH-----HHHHHHTTSCHHHHHHHTTCCGGGHHHHHHHHHHHHTTCGGGCEECTTHHHHHHHSCTTSEEEEEC
T ss_pred             HHcCCCCCH-----HHHHHHhcchhhhhhhccccchhhHHHHHHHhhhhhcccccccccccchhhhhhhhcccccccccc
Confidence            466777666     5666677766444 3444332 233444444443322  235789999999999997  6788999


Q ss_pred             CCChHHHHHHHHHcCCccccceeEeeccCCCCCCCCCCCCCcccccCCccccccCCCCHHHHHHHHHHhCCCCCcEEEEe
Q 027403           77 NADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFD  156 (224)
Q Consensus        77 n~~~~~~~~~l~~lgl~~~fd~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~~~~~~~al~~~~~~~~~~l~Vg  156 (224)
                      |++...+...++++|+.++|+.++++++....                       ||+|.+|..+++++|++|++|+|||
T Consensus       105 ~~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~-----------------------KP~p~~~~~~~~~~~~~~~~~l~Vg  161 (207)
T d2hdoa1         105 SQRRNELESGMRSYPFMMRMAVTISADDTPKR-----------------------KPDPLPLLTALEKVNVAPQNALFIG  161 (207)
T ss_dssp             SSCHHHHHHHHTTSGGGGGEEEEECGGGSSCC-----------------------TTSSHHHHHHHHHTTCCGGGEEEEE
T ss_pred             cccccccccccccccccccccccccccccccc-----------------------hhhhhhhcccccceeeeccceeEec
Confidence            99999999999999999999999999988774                       9999999999999999999999999


Q ss_pred             CChhcHHHHHHcCCeEEEECCCCC----CCCCceEeCCHhHHHHH
Q 027403          157 DSARNIASAKAAGLHTVIVGSSVP----VPPADHALNSIHNIKEA  197 (224)
Q Consensus       157 Ds~~Di~~A~~~G~~~v~v~~~~~----~~~~d~~i~~~~dl~~~  197 (224)
                      ||.+|+.+|+++|+.++++.+|..    ...++++++++.||.++
T Consensus       162 Ds~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~~~i~~l~dll~l  206 (207)
T d2hdoa1         162 DSVSDEQTAQAANVDFGLAVWGMDPNADHQKVAHRFQKPLDILEL  206 (207)
T ss_dssp             SSHHHHHHHHHHTCEEEEEGGGCCTTGGGSCCSEEESSGGGGGGG
T ss_pred             CCHHHHHHHHHcCCeEEEEecCCCChhHhhhcCcEeCCHHHHHhh
Confidence            999999999999999999988754    34589999999988654

>d1x42a1 c.108.1.1 (A:1-230) Hypothetical protein PH0459 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: HAD-related
domain: Hypothetical protein PH0459
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=99.87  E-value=1.6e-22  Score=166.50  Aligned_cols=124  Identities=19%  Similarity=0.324  Sum_probs=113.7

Q ss_pred             CCCChhHHHHHhcCC--CCeEEEeCCChHHHHHHHHHcCCccccceeEeeccCCCCCCCCCCCCCcccccCCccccccCC
Q 027403           55 LKPDPVLRNLLLSMP--QRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCK  132 (224)
Q Consensus        55 ~~~~~g~~~~L~~l~--~~~~I~Tn~~~~~~~~~l~~lgl~~~fd~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~K  132 (224)
                      +.++||+.++|+.|+  ++++|+||++...+...++.+|+.++||.++++++++..                       |
T Consensus        99 ~~~~p~~~~~L~~l~~~~~i~i~Sn~~~~~~~~~l~~~gl~~~fd~i~~s~~~~~~-----------------------K  155 (230)
T d1x42a1          99 GELYPEVVEVLKSLKGKYHVGMITDSDTEYLMAHLDALGIKDLFDSITTSEEAGFF-----------------------K  155 (230)
T ss_dssp             CCBCTTHHHHHHHHBTTBEEEEEESSCHHHHHHHHHHHTCGGGCSEEEEHHHHTBC-----------------------T
T ss_pred             CcccccHHHHHHHhhccCceeeeeccccccchhhhccccccccccccccccccccc-----------------------c
Confidence            578999999999997  678899999999999999999999999999999988764                       9


Q ss_pred             CCHHHHHHHHHHhCCCCCcEEEEeCCh-hcHHHHHHcCCeEEEECCCCC----CCCCceEeCCHhHHHHHHHHH
Q 027403          133 PSLEAIETAIRIANVDPKKTIFFDDSA-RNIASAKAAGLHTVIVGSSVP----VPPADHALNSIHNIKEAIPEI  201 (224)
Q Consensus       133 P~~~~~~~al~~~~~~~~~~l~VgDs~-~Di~~A~~~G~~~v~v~~~~~----~~~~d~~i~~~~dl~~~i~~~  201 (224)
                      |+|++|..+++++|++|++|+||||+. +||.+|+++|++++++.++..    ...+++++.|+.||.++|.+|
T Consensus       156 P~~~~~~~~~~~l~~~p~~~l~vgD~~~~Di~~A~~~G~~~v~v~~~~~~~~~~~~~d~~i~~l~el~~~l~~l  229 (230)
T d1x42a1         156 PHPRIFELALKKAGVKGEEAVYVGDNPVKDCGGSKNLGMTSILLDRKGEKREFWDKCDFIVSDLREVIKIVDEL  229 (230)
T ss_dssp             TSHHHHHHHHHHHTCCGGGEEEEESCTTTTHHHHHTTTCEEEEECTTSCCGGGGGGSSEEESSTTHHHHHHHHH
T ss_pred             hhhHHHHHHHhhhcccccccceeecCcHhHHHHHHHcCCEEEEECCCCCCcccccCCCEEECCHHHHHHHHHHc
Confidence            999999999999999999999999996 799999999999999987643    346899999999999998874

>d1qq5a_ c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Xanthobacter autotrophicus [TaxId: 280]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: HAD-related
domain: L-2-Haloacid dehalogenase, HAD
species: Xanthobacter autotrophicus [TaxId: 280]

Probab=99.87  E-value=1.6e-21  Score=160.38  Aligned_cols=126  Identities=17%  Similarity=0.338  Sum_probs=114.5

Q ss_pred             CCCCCChhHHHHHhcCC-CCeEEEeCCChHHHHHHHHHcCCccccceeEeeccCCCCCCCCCCCCCcccccCCccccccC
Q 027403           53 EKLKPDPVLRNLLLSMP-QRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILC  131 (224)
Q Consensus        53 ~~~~~~~g~~~~L~~l~-~~~~I~Tn~~~~~~~~~l~~lgl~~~fd~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  131 (224)
                      ....++|++.++|++|+ ..++++||++...+...++++|+.++||.++++++++.+                       
T Consensus        90 ~~~~~~~~~~~~L~~l~~~~~~v~s~~~~~~~~~~~~~~~~~~~fd~v~~s~~~~~~-----------------------  146 (245)
T d1qq5a_          90 NRLTPYPDAAQCLAELAPLKRAILSNGAPDMLQALVANAGLTDSFDAVISVDAKRVF-----------------------  146 (245)
T ss_dssp             GSCCBCTTHHHHHHHHTTSEEEEEESSCHHHHHHHHHHTTCGGGCSEEEEGGGGTCC-----------------------
T ss_pred             cccccchhhhHHHHHHhhhceeEEeccchHHHHHHHhhccccccccccccccccccc-----------------------
Confidence            34689999999999987 678899999999999999999999999999999998875                       


Q ss_pred             CCCHHHHHHHHHHhCCCCCcEEEEeCChhcHHHHHHcCCeEEEECCCCC----------------------------CCC
Q 027403          132 KPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP----------------------------VPP  183 (224)
Q Consensus       132 KP~~~~~~~al~~~~~~~~~~l~VgDs~~Di~~A~~~G~~~v~v~~~~~----------------------------~~~  183 (224)
                      ||+|++|..+++++|++|++|+||||+.+||.+|+++|+++|||.++..                            ...
T Consensus       147 KP~p~~f~~a~~~lg~~p~e~l~VgD~~~di~~A~~aG~~tv~v~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (245)
T d1qq5a_         147 KPHPDSYALVEEVLGVTPAEVLFVSSNGFDVGGAKNFGFSVARVARLSQEALARELVSGTIAPLTMFKALRMREETYAEA  226 (245)
T ss_dssp             TTSHHHHHHHHHHHCCCGGGEEEEESCHHHHHHHHHHTCEEEEECCSCHHHHHHHTTSSSCCHHHHHHHHHSSCCTTSCC
T ss_pred             CccHHHHHHHHHHhCCChhhEEEEeCCHHHHHHHHHcCCeEEEEcCCCcccccccccccccccchhhhhhhhhhhhccCC
Confidence            9999999999999999999999999999999999999999999976421                            345


Q ss_pred             CceEeCCHhHHHHHHHHH
Q 027403          184 ADHALNSIHNIKEAIPEI  201 (224)
Q Consensus       184 ~d~~i~~~~dl~~~i~~~  201 (224)
                      +|++++++.||+++|..+
T Consensus       227 pd~~i~~l~el~~lv~~~  244 (245)
T d1qq5a_         227 PDFVVPALGDLPRLVRGM  244 (245)
T ss_dssp             CSEEESSGGGHHHHHHHH
T ss_pred             CCEEECCHHHHHHHHHhh
Confidence            899999999999998764

>d1swva_ c.108.1.3 (A:) Phosphonoacetaldehyde hydrolase {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Phosphonoacetaldehyde hydrolase-like
domain: Phosphonoacetaldehyde hydrolase
species: Bacillus cereus [TaxId: 1396]

Probab=99.86  E-value=5.9e-22  Score=165.37  Aligned_cols=126  Identities=13%  Similarity=0.094  Sum_probs=112.9

Q ss_pred             CCCCCChhHHHHHhcCC---CCeEEEeCCChHHHHHHHHHcCCcccc-ceeEeeccCCCCCCCCCCCCCcccccCCcccc
Q 027403           53 EKLKPDPVLRNLLLSMP---QRKIIFTNADQKHAMEVLGRLGLEDCF-EGIICFETINPRLQPADNTDGIENNSFSSNQR  128 (224)
Q Consensus        53 ~~~~~~~g~~~~L~~l~---~~~~I~Tn~~~~~~~~~l~~lgl~~~f-d~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~  128 (224)
                      ....++||+.++|+.|+   ++++|+||+++..+...++++|+.++| |.+++++++...                    
T Consensus        96 ~~~~~~~g~~~~L~~Lk~~g~~i~i~Tn~~~~~~~~~l~~~~l~~~f~d~~~~~d~~~~~--------------------  155 (257)
T d1swva_          96 RYASPINGVKEVIASLRERGIKIGSTTGYTREMMDIVAKEAALQGYKPDFLVTPDDVPAG--------------------  155 (257)
T ss_dssp             GGCCBCTTHHHHHHHHHHTTCEEEEBCSSCHHHHHHHHHHHHHTTCCCSCCBCGGGSSCC--------------------
T ss_pred             ccCccCCcHHHHHHHHHhcccceeecCCCchhhHHHHHHHHhhccccccccccccccccc--------------------
Confidence            34679999999999996   678899999999999999999999887 778899988764                    


Q ss_pred             ccCCCCHHHHHHHHHHhCCC-CCcEEEEeCChhcHHHHHHcCCeEEEECCCCC---------------------------
Q 027403          129 ILCKPSLEAIETAIRIANVD-PKKTIFFDDSARNIASAKAAGLHTVIVGSSVP---------------------------  180 (224)
Q Consensus       129 ~~~KP~~~~~~~al~~~~~~-~~~~l~VgDs~~Di~~A~~~G~~~v~v~~~~~---------------------------  180 (224)
                         ||+|.+|..+++++|+. +++|+||||+.+||.+|+++|+.+|+|.+|..                           
T Consensus       156 ---KP~p~~~~~~~~~l~~~p~~~~v~VgDs~~Di~aA~~aG~~ti~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  232 (257)
T d1swva_         156 ---RPYPWMCYKNAMELGVYPMNHMIKVGDTVSDMKEGRNAGMWTVGVILGSSELGLTEEEVENMDSVELREKIEVVRNR  232 (257)
T ss_dssp             ---TTSSHHHHHHHHHHTCCSGGGEEEEESSHHHHHHHHHTTSEEEEECTTCTTTCCCHHHHHHSCHHHHHHHHHHHHHH
T ss_pred             ---ccChHHHHHHHHHhCCCCcceEEEEeCChhhHHHHHHCCCEEEEEccCCCCCCCCHHHHhhCCHHHHHHHHHHHHHH
Confidence               99999999999999995 58999999999999999999999999999853                           


Q ss_pred             --CCCCceEeCCHhHHHHHHHHH
Q 027403          181 --VPPADHALNSIHNIKEAIPEI  201 (224)
Q Consensus       181 --~~~~d~~i~~~~dl~~~i~~~  201 (224)
                        ..+|||+++++.||.++|..+
T Consensus       233 l~~~gad~vi~~l~eL~~ii~~~  255 (257)
T d1swva_         233 FVENGAHFTIETMQELESVMEHI  255 (257)
T ss_dssp             HHHTTCSEEESSGGGHHHHHHHH
T ss_pred             HHhCCCCEEECCHHHHHHHHHHH
Confidence              234899999999999988765

>d2hcfa1 c.108.1.6 (A:2-229) Hypothetical protein CT1708 {Chlorobium tepidum [TaxId: 1097]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: Hypothetical protein CT1708
species: Chlorobium tepidum [TaxId: 1097]

Probab=99.86  E-value=6.7e-22  Score=162.27  Aligned_cols=138  Identities=14%  Similarity=0.134  Sum_probs=118.1

Q ss_pred             HHHHHhccCCCCCCCCChhHHHHHhcCC----CCeEEEeCCChHHHHHHHHHcCCccccceeEeeccCCCCCCCCCCCCC
Q 027403           42 FHAFVHGKLPYEKLKPDPVLRNLLLSMP----QRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDG  117 (224)
Q Consensus        42 ~~~~~~~~~~~~~~~~~~g~~~~L~~l~----~~~~I~Tn~~~~~~~~~l~~lgl~~~fd~ii~~~~~~~~~~~~~~~~~  117 (224)
                      +...+..........++||+.++|+.|+    .+++|+||+++..+...++.+|+.++||.++++++...+         
T Consensus        77 ~~~~~~~~~~~~~~~~~~g~~~~L~~L~~~g~~~~~v~t~~~~~~~~~~l~~~gl~~~fd~i~~~~~~~~~---------  147 (228)
T d2hcfa1          77 YIALFRERARREDITLLEGVRELLDALSSRSDVLLGLLTGNFEASGRHKLKLPGIDHYFPFGAFADDALDR---------  147 (228)
T ss_dssp             HHHHHHHHCCGGGEEECTTHHHHHHHHHTCTTEEEEEECSSCHHHHHHHHHTTTCSTTCSCEECTTTCSSG---------
T ss_pred             HHHHHHHHhhccCceecCchHHHHhhhhccccccccccCCCcchhhhhhhhhhcccccccccccccccccc---------
Confidence            3333333333445788999999999995    356799999999999999999999999999999988765         


Q ss_pred             cccccCCccccccCCCCHHHHHHHHHHh---CCCCCcEEEEeCChhcHHHHHHcCCeEEEECCCCC------CCCCceEe
Q 027403          118 IENNSFSSNQRILCKPSLEAIETAIRIA---NVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP------VPPADHAL  188 (224)
Q Consensus       118 ~~~~~~~~~~~~~~KP~~~~~~~al~~~---~~~~~~~l~VgDs~~Di~~A~~~G~~~v~v~~~~~------~~~~d~~i  188 (224)
                                    ||+|.++...++.+   +++|++|+||||+++|+.+|+++|+++|+|.+|..      ..+||+++
T Consensus       148 --------------k~~p~~~~~~~~~~~~~~~~p~~~l~VGD~~~Di~aA~~aG~~~i~v~~g~~~~~~l~~~~ad~vi  213 (228)
T d2hcfa1         148 --------------NELPHIALERARRMTGANYSPSQIVIIGDTEHDIRCARELDARSIAVATGNFTMEELARHKPGTLF  213 (228)
T ss_dssp             --------------GGHHHHHHHHHHHHHCCCCCGGGEEEEESSHHHHHHHHTTTCEEEEECCSSSCHHHHHTTCCSEEE
T ss_pred             --------------cchhHHHHHHhhhhcccCCChhHheeecCChHHHHHHHHcCCEEEEEcCCCCCHHHHhhCCCCEEE
Confidence                          99999887777666   78999999999999999999999999999998753      55799999


Q ss_pred             CCHhHHHHHHHHHH
Q 027403          189 NSIHNIKEAIPEIW  202 (224)
Q Consensus       189 ~~~~dl~~~i~~~~  202 (224)
                      +|+.||.++|.+++
T Consensus       214 ~~~~el~~~l~~l~  227 (228)
T d2hcfa1         214 KNFAETDEVLASIL  227 (228)
T ss_dssp             SCSCCHHHHHHHHH
T ss_pred             CCHHHHHHHHHHHh
Confidence            99999999999875

>d2fdra1 c.108.1.6 (A:3-224) Hypothetical protein Atu0790 {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: Hypothetical protein Atu0790
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=99.85  E-value=2.3e-21  Score=157.92  Aligned_cols=128  Identities=17%  Similarity=0.262  Sum_probs=112.7

Q ss_pred             CCCCChhHHHHHhcCCCCeEEEeCCChHHHHHHHHHcCCccccceeEee-ccCCCCCCCCCCCCCcccccCCccccccCC
Q 027403           54 KLKPDPVLRNLLLSMPQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICF-ETINPRLQPADNTDGIENNSFSSNQRILCK  132 (224)
Q Consensus        54 ~~~~~~g~~~~L~~l~~~~~I~Tn~~~~~~~~~l~~lgl~~~fd~ii~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~K  132 (224)
                      ...++||+.++|+.++.+++|+||+....+...++++|+.++|+.++++ ++.+..                     .+|
T Consensus        83 ~~~~~~g~~~~L~~l~~~~~i~t~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~~---------------------~~K  141 (222)
T d2fdra1          83 DVKIIDGVKFALSRLTTPRCICSNSSSHRLDMMLTKVGLKPYFAPHIYSAKDLGAD---------------------RVK  141 (222)
T ss_dssp             HCCBCTTHHHHHHHCCSCEEEEESSCHHHHHHHHHHTTCGGGTTTCEEEHHHHCTT---------------------CCT
T ss_pred             ccchhhhHHHHhhhccccceeeeecchhhhhhhhcccccccccceeeccccccccc---------------------ccc
Confidence            4678999999999999999999999999999999999999999986654 432210                     149


Q ss_pred             CCHHHHHHHHHHhCCCCCcEEEEeCChhcHHHHHHcCCeEEEECCCCC----------CCCCceEeCCHhHHHHHHHHHH
Q 027403          133 PSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP----------VPPADHALNSIHNIKEAIPEIW  202 (224)
Q Consensus       133 P~~~~~~~al~~~~~~~~~~l~VgDs~~Di~~A~~~G~~~v~v~~~~~----------~~~~d~~i~~~~dl~~~i~~~~  202 (224)
                      |+|.+|..+++++|++|++|+||||+..|+.+|+++|+++|++.++..          ..+++++++|+.||.++|..+.
T Consensus       142 P~~~~~~~~~~~l~~~p~~~l~vgDs~~dv~aA~~aG~~~i~v~~~~~~~~~~~~~l~~~~ad~vi~~l~eL~~ll~~l~  221 (222)
T d2fdra1         142 PKPDIFLHGAAQFGVSPDRVVVVEDSVHGIHGARAAGMRVIGFTGASHTYPSHADRLTDAGAETVISRMQDLPAVIAAMA  221 (222)
T ss_dssp             TSSHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHHTTCEEEEECCSTTCCTTHHHHHHHHTCSEEESCGGGHHHHHHHHT
T ss_pred             cCHHHHHHHHHhhCCCCceEEEEcCCHHHHHHHHHcCCEEEEEccCCCCCcchHHHHHhCCCCEEECCHHHHHHHHHHhc
Confidence            999999999999999999999999999999999999999999998853          2258999999999999998764

>d1te2a_ c.108.1.6 (A:) Phosphatase YniC {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: Phosphatase YniC
species: Escherichia coli [TaxId: 562]

Probab=99.85  E-value=1.7e-21  Score=158.24  Aligned_cols=118  Identities=19%  Similarity=0.225  Sum_probs=108.3

Q ss_pred             CCCChhHHHHHhcCC---CCeEEEeCCChHHHHHHHHHcCCccccceeEeeccCCCCCCCCCCCCCcccccCCccccccC
Q 027403           55 LKPDPVLRNLLLSMP---QRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILC  131 (224)
Q Consensus        55 ~~~~~g~~~~L~~l~---~~~~I~Tn~~~~~~~~~l~~lgl~~~fd~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  131 (224)
                      ..++||+.++|+.|+   ++++|+||+++..+...++++|+.++|+.++++++++..                       
T Consensus        87 ~~~~pg~~~~l~~L~~~g~~~~i~T~~~~~~~~~~l~~~~l~~~F~~i~~~~~~~~~-----------------------  143 (218)
T d1te2a_          87 RPLLPGVREAVALCKEQGLLVGLASASPLHMLEKVLTMFDLRDSFDALASAEKLPYS-----------------------  143 (218)
T ss_dssp             CCBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGCSEEEECTTSSCC-----------------------
T ss_pred             ccccchHHHHHHHhhhccccccccccccccccccccccccccccccccccccccccc-----------------------
Confidence            467899999999996   778899999999999999999999999999999998874                       


Q ss_pred             CCCHHHHHHHHHHhCCCCCcEEEEeCChhcHHHHHHcCCeEEEECCCCC-----CCCCceEeCCHhHHH
Q 027403          132 KPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP-----VPPADHALNSIHNIK  195 (224)
Q Consensus       132 KP~~~~~~~al~~~~~~~~~~l~VgDs~~Di~~A~~~G~~~v~v~~~~~-----~~~~d~~i~~~~dl~  195 (224)
                      ||+|++|..+++++|++|++|+||||+.+|+.+|+++|+++++|.++..     ...++++++|+.||.
T Consensus       144 Kp~~~~~~~~~~~l~~~~~~~l~igD~~~di~aA~~~G~~~i~v~~~~~~~~~~~~~a~~~i~~l~el~  212 (218)
T d1te2a_         144 KPHPQVYLDCAAKLGVDPLTCVALEDSVNGMIASKAARMRSIVVPAPEAQNDPRFVLANVKLSSLTELT  212 (218)
T ss_dssp             TTSTHHHHHHHHHHTSCGGGEEEEESSHHHHHHHHHTTCEEEECCCTTTTTCGGGGGSSEECSCGGGCC
T ss_pred             hhhHHHHHHHHHHcCCCchhcEEEeeCHHHHHHHHHcCCEEEEECCCCCccchhhcCCCEEECChhhCC
Confidence            9999999999999999999999999999999999999999999977643     345899999999973

>d1zrna_ c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Pseudomonas sp., strain YL [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: HAD-related
domain: L-2-Haloacid dehalogenase, HAD
species: Pseudomonas sp., strain YL [TaxId: 306]

Probab=99.85  E-value=6.9e-21  Score=154.34  Aligned_cols=121  Identities=19%  Similarity=0.297  Sum_probs=109.6

Q ss_pred             CCCCChhHHHHHhcCC---CCeEEEeCCChHHHHHHHHHcCCccccceeEeeccCCCCCCCCCCCCCcccccCCcccccc
Q 027403           54 KLKPDPVLRNLLLSMP---QRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRIL  130 (224)
Q Consensus        54 ~~~~~~g~~~~L~~l~---~~~~I~Tn~~~~~~~~~l~~lgl~~~fd~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  130 (224)
                      ...+++++.++|+.++   .+++++||++.......++++++..+||.++++++.+..                      
T Consensus        91 ~~~~~~~~~~~l~~l~~~~~~~~i~tn~~~~~~~~~~~~~~~~~~fd~~~~s~~~~~~----------------------  148 (220)
T d1zrna_          91 RLAPFSEVPDSLRELKRRGLKLAILSNGSPQSIDAVVSHAGLRDGFDHLLSVDPVQVY----------------------  148 (220)
T ss_dssp             GCEECTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGCSEEEESGGGTCC----------------------
T ss_pred             cccccchhHHHHHHHHhcCCeEEeecchHHHHHHHHHhhccccccccceeeeeeeecc----------------------
Confidence            3568889989988886   678999999999999999999999999999999998874                      


Q ss_pred             CCCCHHHHHHHHHHhCCCCCcEEEEeCChhcHHHHHHcCCeEEEECCCCC-----CCCCceEeCCHhHHHHH
Q 027403          131 CKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP-----VPPADHALNSIHNIKEA  197 (224)
Q Consensus       131 ~KP~~~~~~~al~~~~~~~~~~l~VgDs~~Di~~A~~~G~~~v~v~~~~~-----~~~~d~~i~~~~dl~~~  197 (224)
                       ||+|++|+.+++++|++|++|+||||+..|+.+|+++|+.++|+.++..     ...+|++++|+.+|.++
T Consensus       149 -KP~p~~~~~~~~~~g~~p~e~l~VgD~~~Di~~A~~aG~~~v~v~r~~~~~~~~~~~~d~~i~~l~el~~l  219 (220)
T d1zrna_         149 -KPDNRVYELAEQALGLDRSAILFVASNAWDATGARYFGFPTCWINRTGNVFEEMGQTPDWEVTSLRAVVEL  219 (220)
T ss_dssp             -TTSHHHHHHHHHHHTSCGGGEEEEESCHHHHHHHHHHTCCEEEECTTCCCCCSSSCCCSEEESSHHHHHTT
T ss_pred             -ccHHHHHHHHHHHhCCCCceEEEEecChHhHHHHHHcCCEEEEEcCCCCCcccccCCCCEEECCHHHHHhh
Confidence             9999999999999999999999999999999999999999999986643     34489999999999864

>d2hsza1 c.108.1.6 (A:1-224) Phosphoglycolate phosphatase Gph {Haemophilus somnus [TaxId: 731]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: Phosphoglycolate phosphatase Gph
species: Haemophilus somnus [TaxId: 731]

Probab=99.85  E-value=9e-22  Score=159.51  Aligned_cols=123  Identities=19%  Similarity=0.247  Sum_probs=113.0

Q ss_pred             CCCCCChhHHHHHhcCC---CCeEEEeCCChHHHHHHHHHcCCccccceeEeeccCCCCCCCCCCCCCcccccCCccccc
Q 027403           53 EKLKPDPVLRNLLLSMP---QRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRI  129 (224)
Q Consensus        53 ~~~~~~~g~~~~L~~l~---~~~~I~Tn~~~~~~~~~l~~lgl~~~fd~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  129 (224)
                      ....++||+.++|..|+   .+++|+||+++..+...++++|+.++|+.++++++.+..                     
T Consensus        92 ~~~~l~~~~~~~L~~L~~~g~~~~i~tn~~~~~~~~~l~~~gl~~~f~~~~~~~~~~~~---------------------  150 (224)
T d2hsza1          92 NISRLYPNVKETLEALKAQGYILAVVTNKPTKHVQPILTAFGIDHLFSEMLGGQSLPEI---------------------  150 (224)
T ss_dssp             SSCEECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGCSEEECTTTSSSC---------------------
T ss_pred             cccchHHHHHHHHHHHhccCCcccccccccHHHHHHHHHhcCchhhccccccccccccc---------------------
Confidence            45679999999999996   678899999999999999999999999999999998875                     


Q ss_pred             cCCCCHHHHHHHHHHhCCCCCcEEEEeCChhcHHHHHHcCCeEEEECCCCC------CCCCceEeCCHhHHHHHH
Q 027403          130 LCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP------VPPADHALNSIHNIKEAI  198 (224)
Q Consensus       130 ~~KP~~~~~~~al~~~~~~~~~~l~VgDs~~Di~~A~~~G~~~v~v~~~~~------~~~~d~~i~~~~dl~~~i  198 (224)
                        ||+|.+|..++++++++|++|+||||+.+|+.+|+++|+.+|++.+|..      ..++|++++|+.||.++|
T Consensus       151 --kp~p~~~~~~~~~~~~~~~~~~~igD~~~Di~~A~~aG~~~i~v~~g~~~~~~l~~~~~d~~v~~l~dL~~ii  223 (224)
T d2hsza1         151 --KPHPAPFYYLCGKFGLYPKQILFVGDSQNDIFAAHSAGCAVVGLTYGYNYNIPIAQSKPDWIFDDFADILKIT  223 (224)
T ss_dssp             --TTSSHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHHHTCEEEEESSSCSTTCCGGGGCCSEEESSGGGGGGGT
T ss_pred             --cccchhhHHHHHHhhhhhhccchhcCcHHHHHHHHHcCCeEEEEeCCCCCcchhhhcCCCEEECCHHHHHHhh
Confidence              9999999999999999999999999999999999999999999998754      345899999999998765

>d2ah5a1 c.108.1.6 (A:1-210) predicted phosphatase SP0104 {Streptococcus pneumoniae [TaxId: 1313]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: predicted phosphatase SP0104
species: Streptococcus pneumoniae [TaxId: 1313]

Probab=99.85  E-value=1.5e-21  Score=157.79  Aligned_cols=121  Identities=16%  Similarity=0.216  Sum_probs=110.8

Q ss_pred             CCCCCChhHHHHHhcCC--CCeEEEeCCChHHHHHHHHHcCCccccceeEeeccCCCCCCCCCCCCCcccccCCcccccc
Q 027403           53 EKLKPDPVLRNLLLSMP--QRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRIL  130 (224)
Q Consensus        53 ~~~~~~~g~~~~L~~l~--~~~~I~Tn~~~~~~~~~l~~lgl~~~fd~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  130 (224)
                      ...++++++.++|+.++  ++++|+||++...++..++++|+..+|+.++++++.+                        
T Consensus        81 ~~~~~~~~~~~~l~~l~~~~~~~i~t~~~~~~~~~~l~~~gl~~~fd~v~~~~~~~------------------------  136 (210)
T d2ah5a1          81 YEAQLFPQIIDLLEELSSSYPLYITTTKDTSTAQDMAKNLEIHHFFDGIYGSSPEA------------------------  136 (210)
T ss_dssp             GSCEECTTHHHHHHHHHTTSCEEEEEEEEHHHHHHHHHHTTCGGGCSEEEEECSSC------------------------
T ss_pred             hcccchhHHHHHHhhhhcccchhhcccccchhhhHHHHhhcccccccccccccccc------------------------
Confidence            35678999999999996  7789999999999999999999999999999888753                        


Q ss_pred             CCCCHHHHHHHHHHhCCCCCcEEEEeCChhcHHHHHHcCCeEEEECCCCC------CCCCceEeCCHhHHHHHH
Q 027403          131 CKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP------VPPADHALNSIHNIKEAI  198 (224)
Q Consensus       131 ~KP~~~~~~~al~~~~~~~~~~l~VgDs~~Di~~A~~~G~~~v~v~~~~~------~~~~d~~i~~~~dl~~~i  198 (224)
                       ||+|.+|..+++++|++|++++||||+.+|+.+|+++|+++++|.+|..      ..+||++++++.||.++|
T Consensus       137 -~~~p~~~~~~~~~~~~~~~~~v~VGDs~~Di~aa~~aGi~~i~v~~g~~~~~~l~~~~pd~vi~~l~el~~~l  209 (210)
T d2ah5a1         137 -PHKADVIHQALQTHQLAPEQAIIIGDTKFDMLGARETGIQKLAITWGFGEQADLLNYQPDYIAHKPLEVLAYF  209 (210)
T ss_dssp             -CSHHHHHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEESSSSSCHHHHHTTCCSEEESSTTHHHHHT
T ss_pred             -cccccccchhhhhhhcccccceeecCCHHHHHHHHHcCCeEEEEcCCCCCHHHHHhCCCCEEECCHHHHHHHh
Confidence             8999999999999999999999999999999999999999999998753      466999999999998865

>d2gfha1 c.108.1.6 (A:1-247) N-acylneuraminate-9-phosphatase NANP {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: N-acylneuraminate-9-phosphatase NANP
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.85  E-value=6.6e-21  Score=157.55  Aligned_cols=126  Identities=17%  Similarity=0.279  Sum_probs=111.3

Q ss_pred             CCCCCChhHHHHHhcCC--CCeEEEeCCChHHHHHHHHHcCCccccceeEeeccCCCCCCCCCCCCCcccccCCcccccc
Q 027403           53 EKLKPDPVLRNLLLSMP--QRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRIL  130 (224)
Q Consensus        53 ~~~~~~~g~~~~L~~l~--~~~~I~Tn~~~~~~~~~l~~lgl~~~fd~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  130 (224)
                      ..+.++||+.++|+.|+  ++++|+||++...+...++++|+.++||.++++++++.+                      
T Consensus       106 ~~~~~~~~~~~~L~~L~~~~~l~i~Tn~~~~~~~~~l~~~gl~~~fd~i~~s~~~~~~----------------------  163 (247)
T d2gfha1         106 QHMILADDVKAMLTELRKEVRLLLLTNGDRQTQREKIEACACQSYFDAIVIGGEQKEE----------------------  163 (247)
T ss_dssp             HTCCCCHHHHHHHHHHHTTSEEEEEECSCHHHHHHHHHHHTCGGGCSEEEEGGGSSSC----------------------
T ss_pred             ccCccCccHHHHHHHhhcccceEEeecccchhhhhhhhhccccccccccccccccccc----------------------
Confidence            34679999999999996  678899999999999999999999999999999998874                      


Q ss_pred             CCCCHHHHHHHHHHhCCCCCcEEEEeCCh-hcHHHHHHcCCeEE-EECCCCC-----CCCCceEeCCHhHHHHHHHHH
Q 027403          131 CKPSLEAIETAIRIANVDPKKTIFFDDSA-RNIASAKAAGLHTV-IVGSSVP-----VPPADHALNSIHNIKEAIPEI  201 (224)
Q Consensus       131 ~KP~~~~~~~al~~~~~~~~~~l~VgDs~-~Di~~A~~~G~~~v-~v~~~~~-----~~~~d~~i~~~~dl~~~i~~~  201 (224)
                       ||+|.+|+.+++++|++|++|+||||+. +|+.+|+++|++++ ++..+..     ...++++++++.||.++|.++
T Consensus       164 -KP~p~~~~~~~~~~~~~~~~~l~iGD~~~~Di~~A~~~G~~~~~~~~~~~~~~~~~~~~p~~~i~~l~eL~~ll~~i  240 (247)
T d2gfha1         164 -KPAPSIFYHCCDLLGVQPGDCVMVGDTLETDIQGGLNAGLKATVWINKSGRVPLTSSPMPHYMVSSVLELPALLQSI  240 (247)
T ss_dssp             -TTCHHHHHHHHHHHTCCGGGEEEEESCTTTHHHHHHHTTCSEEEEECTTCCCCSSCCCCCSEEESSGGGHHHHHHHH
T ss_pred             -hhhhhhHHHHHHHhhcCHHhcceeccChHhHHHHHHHcCCeEEEEECCCCCCcccccCCCCEEECCHHHHHHHHHHH
Confidence             9999999999999999999999999997 79999999999855 5544332     455899999999999988765

>d2go7a1 c.108.1.6 (A:3-206) Hypothetical protein SP2064 {Streptococcus pneumoniae [TaxId: 1313]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: Hypothetical protein SP2064
species: Streptococcus pneumoniae [TaxId: 1313]

Probab=99.84  E-value=2e-21  Score=156.78  Aligned_cols=121  Identities=21%  Similarity=0.327  Sum_probs=108.9

Q ss_pred             CCCCCChhHHHHHhcCC---CCeEEEeCCChHHHHHHHHHcCCccccceeEeeccCCCCCCCCCCCCCcccccCCccccc
Q 027403           53 EKLKPDPVLRNLLLSMP---QRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRI  129 (224)
Q Consensus        53 ~~~~~~~g~~~~L~~l~---~~~~I~Tn~~~~~~~~~l~~lgl~~~fd~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  129 (224)
                      ..+.++||+.++|+.|+   ++++|+||++.. +...++++|+.+||+.++++++....                     
T Consensus        79 ~~~~~~pgv~~~L~~L~~~g~~~~v~Sn~~~~-~~~~l~~~gl~~~f~~i~~s~~~~~~---------------------  136 (204)
T d2go7a1          79 AQVVLMPGAREVLAWADESGIQQFIYTHKGNN-AFTILKDLGVESYFTEILTSQSGFVR---------------------  136 (204)
T ss_dssp             GGCEECTTHHHHHHHHHHTTCEEEEECSSCTH-HHHHHHHHTCGGGEEEEECGGGCCCC---------------------
T ss_pred             ccCcccchHHhhhhcccccccchhhhcccchh-hhhhhhhccccccccccccccccccc---------------------
Confidence            35788999999999996   788899998864 56789999999999999999988774                     


Q ss_pred             cCCCCHHHHHHHHHHhCCCCCcEEEEeCChhcHHHHHHcCCeEEEECCCCCCCCCceEeCCHhHHHHHHH
Q 027403          130 LCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVPVPPADHALNSIHNIKEAIP  199 (224)
Q Consensus       130 ~~KP~~~~~~~al~~~~~~~~~~l~VgDs~~Di~~A~~~G~~~v~v~~~~~~~~~d~~i~~~~dl~~~i~  199 (224)
                        ||+|++|..++++++++|++|+||||+.+|+.+|+++|++++++.++.  ..+++.++++.|+.+++.
T Consensus       137 --Kp~~~~~~~~~~~~~~~p~~~l~VgD~~~Di~~A~~~G~~~i~v~~~~--~~~~~~~~~~~dl~~l~~  202 (204)
T d2go7a1         137 --KPSPEAATYLLDKYQLNSDNTYYIGDRTLDVEFAQNSGIQSINFLEST--YEGNHRIQALADISRIFE  202 (204)
T ss_dssp             --TTSSHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHHHTCEEEESSCCS--CTTEEECSSTTHHHHHTS
T ss_pred             --chhHHHHHHHHHHhCCCCceEEEEeCCHHHHHHHHHcCCeEEEEcCCC--CCcCeecCCHHHHHHHhc
Confidence              999999999999999999999999999999999999999999998874  568899999999987653

>d1zs9a1 c.108.1.22 (A:4-256) E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Enolase-phosphatase E1
domain: E-1 enzyme
species: Human(Homo sapiens) [TaxId: 9606]

Probab=99.79  E-value=7e-20  Score=149.13  Aligned_cols=119  Identities=13%  Similarity=0.105  Sum_probs=102.6

Q ss_pred             CCCCCChhHHHHHhcCC---CCeEEEeCCChHHHHHHHHHcCCccccceeEee-ccCCCCCCCCCCCCCcccccCCcccc
Q 027403           53 EKLKPDPVLRNLLLSMP---QRKIIFTNADQKHAMEVLGRLGLEDCFEGIICF-ETINPRLQPADNTDGIENNSFSSNQR  128 (224)
Q Consensus        53 ~~~~~~~g~~~~L~~l~---~~~~I~Tn~~~~~~~~~l~~lgl~~~fd~ii~~-~~~~~~~~~~~~~~~~~~~~~~~~~~  128 (224)
                      ....++||+.++|..|+   ++++|+||++.......++.+|+.++|+.+.++ ++...                     
T Consensus       124 ~~~~~~pg~~e~l~~L~~~g~~l~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~---------------------  182 (253)
T d1zs9a1         124 MKAEFFADVVPAVRKWREAGMKVYIYSSGSVEAQKLLFGHSTEGDILELVDGHFDTKIG---------------------  182 (253)
T ss_dssp             CCBCCCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHTBTTBCCGGGCSEEECGGGC---------------------
T ss_pred             cccccCCCHHHHHHHHhhccCceeecCCCcHHHHHHHHHHcCcchhhhhcceeeccccc---------------------
Confidence            34678999999999995   789999999999999999999999999875543 44443                     


Q ss_pred             ccCCCCHHHHHHHHHHhCCCCCcEEEEeCChhcHHHHHHcCCeEEEECCCCCC------CCCceEeCCHhHH
Q 027403          129 ILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVPV------PPADHALNSIHNI  194 (224)
Q Consensus       129 ~~~KP~~~~~~~al~~~~~~~~~~l~VgDs~~Di~~A~~~G~~~v~v~~~~~~------~~~d~~i~~~~dl  194 (224)
                        +||+|.+|..+++++|++|++|+||||+.+|+.+|+++|+++++|.++...      ..++++++||.||
T Consensus       183 --~KP~p~~~~~~~~~~~~~p~~~l~vgD~~~dv~aA~~aG~~ti~v~r~g~~~~~~~~~~~~~~i~sl~EL  252 (253)
T d1zs9a1         183 --HKVESESYRKIADSIGCSTNNILFLTDVTREASAAEEADVHVAVVVRPGNAGLTDDEKTYYSLITSFSEL  252 (253)
T ss_dssp             --CTTCHHHHHHHHHHHTSCGGGEEEEESCHHHHHHHHHTTCEEEEECCTTCCCCCHHHHHHSCEESSGGGC
T ss_pred             --cCCCcHHHHHHHHHhCCCcCcEEEEeCCHHHHHHHHHcCCEEEEEeCCCCCCCchhhcCCCcEECChHHh
Confidence              399999999999999999999999999999999999999999999876432      2257789999886

>d1o08a_ c.108.1.6 (A:) beta-Phosphoglucomutase {Lactococcus lactis [TaxId: 1358]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: beta-Phosphoglucomutase
species: Lactococcus lactis [TaxId: 1358]

Probab=99.78  E-value=2.4e-19  Score=145.63  Aligned_cols=126  Identities=19%  Similarity=0.259  Sum_probs=105.9

Q ss_pred             CCCCCChhHHHHHhcCC---CCeEEEeCCChHHHHHHHHHcCCccccceeEeeccCCCCCCCCCCCCCcccccCCccccc
Q 027403           53 EKLKPDPVLRNLLLSMP---QRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRI  129 (224)
Q Consensus        53 ~~~~~~~g~~~~L~~l~---~~~~I~Tn~~~~~~~~~l~~lgl~~~fd~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  129 (224)
                      ....++||+.++|+.|+   .+++++||+.  .....++.+|+.++|+.++++++.+.+                     
T Consensus        88 ~~~~~~~g~~~~l~~l~~~~~~i~i~s~~~--~~~~~l~~~~l~~~f~~i~~~~~~~~~---------------------  144 (221)
T d1o08a_          88 SPADVYPGILQLLKDLRSNKIKIALASASK--NGPFLLERMNLTGYFDAIADPAEVAAS---------------------  144 (221)
T ss_dssp             CGGGBCTTHHHHHHHHHHTTCEEEECCSCT--THHHHHHHTTCGGGCSEECCTTTSSSC---------------------
T ss_pred             ccccccCCceeccccccccccceEEEeecc--hhhHHHHhhcccccccccccccccccc---------------------
Confidence            34679999999999997   6677888864  467789999999999999999988774                     


Q ss_pred             cCCCCHHHHHHHHHHhCCCCCcEEEEeCChhcHHHHHHcCCeEEEECCCCCCCCCceEeCCHhHH-HHHHHHHHh
Q 027403          130 LCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVPVPPADHALNSIHNI-KEAIPEIWE  203 (224)
Q Consensus       130 ~~KP~~~~~~~al~~~~~~~~~~l~VgDs~~Di~~A~~~G~~~v~v~~~~~~~~~d~~i~~~~dl-~~~i~~~~~  203 (224)
                        ||+|.+|+.+++++|++|++|+||||+.+|+.+|+++|+++|+|+++......+..++++.++ .+.++++|.
T Consensus       145 --KP~~~~~~~~l~~~~i~~~~~l~VgD~~~di~~A~~aG~~~i~v~~~~~~~~~~~~~~~~~~~~~~~l~el~~  217 (221)
T d1o08a_         145 --KPAPDIFIAAAHAVGVAPSESIGLEDSQAGIQAIKDSGALPIGVGRPEDLGDDIVIVPDTSHYTLEFLKEVWL  217 (221)
T ss_dssp             --TTSTHHHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEESCHHHHCSSSEEESSGGGCCHHHHHHHHH
T ss_pred             --ccChHHHHHHHHHcCCCCceEEEEecCHHHHHHHHHcCCEEEEECChhhcccccEEcCCcccCCHHHHHHHHH
Confidence              999999999999999999999999999999999999999999999876555666677776653 344555543

>d2fi1a1 c.108.1.3 (A:4-190) Putative hydrolase SP0805 {Streptococcus pneumoniae [TaxId: 1313]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Phosphonoacetaldehyde hydrolase-like
domain: Putative hydrolase SP0805
species: Streptococcus pneumoniae [TaxId: 1313]

Probab=99.76  E-value=4.7e-19  Score=141.83  Aligned_cols=100  Identities=19%  Similarity=0.254  Sum_probs=89.0

Q ss_pred             CCCCCChhHHHHHhcCC---CCeEEEeCCChHHHHHHHHHcCCccccceeEeeccCCCCCCCCCCCCCcccccCCccccc
Q 027403           53 EKLKPDPVLRNLLLSMP---QRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRI  129 (224)
Q Consensus        53 ~~~~~~~g~~~~L~~l~---~~~~I~Tn~~~~~~~~~l~~lgl~~~fd~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  129 (224)
                      ....++||+.++|+.|+   .+++|+||++.... ..++++++.++||.+++++++...                     
T Consensus        76 ~~~~~~~gv~~~l~~l~~~g~~~~i~Sn~~~~~~-~~l~~~~l~~~fd~i~~~~~~~~~---------------------  133 (187)
T d2fi1a1          76 EHPILFEGVSDLLEDISNQGGRHFLVSHRNDQVL-EILEKTSIAAYFTEVVTSSSGFKR---------------------  133 (187)
T ss_dssp             TSCCBCTTHHHHHHHHHHTTCEEEEECSSCTHHH-HHHHHTTCGGGEEEEECGGGCCCC---------------------
T ss_pred             hcCcccchhHHHHHHHHhhhccccccccCccchh-hhhhhhcccccccccccccccccc---------------------
Confidence            35688999999998885   78899999887654 579999999999999999988765                     


Q ss_pred             cCCCCHHHHHHHHHHhCCCCCcEEEEeCChhcHHHHHHcCCeEEEECCC
Q 027403          130 LCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSS  178 (224)
Q Consensus       130 ~~KP~~~~~~~al~~~~~~~~~~l~VgDs~~Di~~A~~~G~~~v~v~~~  178 (224)
                        ||+|++|..+++++++  ++++||||+..|+++|+++|++++++.++
T Consensus       134 --KP~p~~~~~~~~~~~~--~~~l~vgDs~~Di~aA~~aG~~~i~v~~~  178 (187)
T d2fi1a1         134 --KPNPESMLYLREKYQI--SSGLVIGDRPIDIEAGQAAGLDTHLFTSI  178 (187)
T ss_dssp             --TTSCHHHHHHHHHTTC--SSEEEEESSHHHHHHHHHTTCEEEECSCH
T ss_pred             --CCCHHHHHHHHHHcCC--CCeEEEeCCHHHHHHHHHcCCEEEEECCC
Confidence              9999999999999986  56999999999999999999999999764

>d1qyia_ c.108.1.13 (A:) Hypothetical protein MW1667 (SA1546) {Staphylococcus aureus [TaxId: 1280]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Hypothetical protein MW1667 (SA1546)
domain: Hypothetical protein MW1667 (SA1546)
species: Staphylococcus aureus [TaxId: 1280]

Probab=99.70  E-value=3.7e-18  Score=152.47  Aligned_cols=137  Identities=20%  Similarity=0.214  Sum_probs=112.4

Q ss_pred             CCCChhHHHHHhcCC---CCeEEEeCCChHHHHHHHHHcCCccccce--eEeeccCCCCCCCCCCCCCcccccCCccccc
Q 027403           55 LKPDPVLRNLLLSMP---QRKIIFTNADQKHAMEVLGRLGLEDCFEG--IICFETINPRLQPADNTDGIENNSFSSNQRI  129 (224)
Q Consensus        55 ~~~~~g~~~~L~~l~---~~~~I~Tn~~~~~~~~~l~~lgl~~~fd~--ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  129 (224)
                      +.|.+|+.++|+.|+   ++++|+||.++..+...++++|+.++|+.  +++.+++..            .+...+....
T Consensus       214 i~p~~~v~~~l~~lk~aGi~v~i~Tg~~~~~a~~il~~lgl~~~F~~~~i~~~~d~~~------------~~~~~~~~~~  281 (380)
T d1qyia_         214 LRPVDEVKVLLNDLKGAGFELGIATGRPYTETVVPFENLGLLPYFEADFIATASDVLE------------AENMYPQARP  281 (380)
T ss_dssp             SSCHHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCGGGSCGGGEECHHHHHH------------HHHHSTTSCC
T ss_pred             ccchhhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCcccCCcceEEecchhhh------------hhhhcccccc
Confidence            568889999999997   78999999999999999999999999985  566554321            1112223334


Q ss_pred             cCCCCHHHHHHHHHHh--------------CCCCCcEEEEeCChhcHHHHHHcCCeEEEECCCCC---------CCCCce
Q 027403          130 LCKPSLEAIETAIRIA--------------NVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP---------VPPADH  186 (224)
Q Consensus       130 ~~KP~~~~~~~al~~~--------------~~~~~~~l~VgDs~~Di~~A~~~G~~~v~v~~~~~---------~~~~d~  186 (224)
                      .+||+|.+|..++..+              +.++++|+||||+.+|+.+|+++|+++|+|.+|..         ..++|+
T Consensus       282 ~~KP~p~~~~~~~~~~~~~~~~k~~iv~~~~~~~~~~~~vGD~~~D~~aak~Ag~~~Igv~~G~~g~~~~~el~~~~AD~  361 (380)
T d1qyia_         282 LGKPNPFSYIAALYGNNRDKYESYINKQDNIVNKDDVFIVGDSLADLLSAQKIGATFIGTLTGLKGKDAAGELEAHHADY  361 (380)
T ss_dssp             CCTTSTHHHHHHHHCCCGGGHHHHHHCCTTCSCTTTEEEEESSHHHHHHHHHHTCEEEEESCBTTBGGGHHHHHHTTCSE
T ss_pred             ccCCChHHHHHHHHHcCCCHHHHHHHHHHhCCCCCeEEEECCCHHHHHHHHHCCCCEEEEecCCCCcccHHHHHhCCCCE
Confidence            4699999999988655              45688999999999999999999999999998864         236999


Q ss_pred             EeCCHhHHHHHHHHHHh
Q 027403          187 ALNSIHNIKEAIPEIWE  203 (224)
Q Consensus       187 ~i~~~~dl~~~i~~~~~  203 (224)
                      +++|+.||++++.++++
T Consensus       362 ii~~~~el~~il~~l~~  378 (380)
T d1qyia_         362 VINHLGELRGVLDNLLE  378 (380)
T ss_dssp             EESSGGGHHHHHSCTTT
T ss_pred             EECCHHHHHHHHHHHHh
Confidence            99999999999988775

>d1cr6a1 c.108.1.2 (A:4-225) Epoxide hydrolase, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: YihX-like
domain: Epoxide hydrolase, N-terminal domain
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.68  E-value=1.9e-17  Score=133.69  Aligned_cols=103  Identities=17%  Similarity=0.203  Sum_probs=91.0

Q ss_pred             CCCCChhHHHHHhcCC---CCeEEEeCCCh----HHHHHHHHHcCCccccceeEeeccCCCCCCCCCCCCCcccccCCcc
Q 027403           54 KLKPDPVLRNLLLSMP---QRKIIFTNADQ----KHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSN  126 (224)
Q Consensus        54 ~~~~~~g~~~~L~~l~---~~~~I~Tn~~~----~~~~~~l~~lgl~~~fd~ii~~~~~~~~~~~~~~~~~~~~~~~~~~  126 (224)
                      ...++|++.++|..|+   .+++++||+..    ......+...|+.++||.++++++++.+                  
T Consensus        95 ~~~~~~~~~~~L~~L~~~~~~~~i~s~~~~~~~~~~~~~~~~~~~l~~~fd~i~~s~~~~~~------------------  156 (222)
T d1cr6a1          95 ARSINRPMLQAAIALKKKGFTTCIVTNNWLDDGDKRDSLAQMMCELSQHFDFLIESCQVGMI------------------  156 (222)
T ss_dssp             TCEECHHHHHHHHHHHHTTCEEEEEECCCCCCSSSHHHHHHHHHHHGGGCSEEEEHHHHSCC------------------
T ss_pred             cCCCCccHHHHHHHHHhcCCceEEeeccccccHHHHHHHHHHhcChHhhhceeeehhhccCC------------------
Confidence            3578999999999996   67889998543    3556667788999999999999998874                  


Q ss_pred             ccccCCCCHHHHHHHHHHhCCCCCcEEEEeCChhcHHHHHHcCCeEEEECCCC
Q 027403          127 QRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSV  179 (224)
Q Consensus       127 ~~~~~KP~~~~~~~al~~~~~~~~~~l~VgDs~~Di~~A~~~G~~~v~v~~~~  179 (224)
                           ||+|++|..++++++++|++|+||||+..||.+|+++|+++|+|.++.
T Consensus       157 -----KP~p~~~~~~~~~~~v~p~~~l~IgD~~~Di~~A~~aG~~ti~V~~~~  204 (222)
T d1cr6a1         157 -----KPEPQIYNFLLDTLKAKPNEVVFLDDFGSNLKPARDMGMVTILVHNTA  204 (222)
T ss_dssp             -----TTCHHHHHHHHHHHTSCTTSEEEEESSSTTTHHHHHHTCEEEECCSSS
T ss_pred             -----CCChHHHHHHHHHhCCCcceEEEEECCHHHHHHHHHcCCEEEEECCcc
Confidence                 999999999999999999999999999999999999999999997654

>d1zd3a1 c.108.1.2 (A:2-224) Epoxide hydrolase, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: YihX-like
domain: Epoxide hydrolase, N-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.67  E-value=1.8e-17  Score=132.54  Aligned_cols=101  Identities=19%  Similarity=0.196  Sum_probs=88.4

Q ss_pred             CCCChhHHHHHhcCC---CCeEEEeCCChH----HHHHHHHHcCCccccceeEeeccCCCCCCCCCCCCCcccccCCccc
Q 027403           55 LKPDPVLRNLLLSMP---QRKIIFTNADQK----HAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQ  127 (224)
Q Consensus        55 ~~~~~g~~~~L~~l~---~~~~I~Tn~~~~----~~~~~l~~lgl~~~fd~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~  127 (224)
                      ..++|++.++|..|+   ++++++||++..    .........++.++||.++++++++.+                   
T Consensus        98 ~~~~~~~~~~l~~L~~~~~~~~i~Tn~~~~~~~~~~~~~~~~~~~~~~fd~i~~s~~~~~~-------------------  158 (225)
T d1zd3a1          98 RKINRPMLQAALMLRKKGFTTAILTNTWLDDRAERDGLAQLMCELKMHFDFLIESCQVGMV-------------------  158 (225)
T ss_dssp             CEECHHHHHHHHHHHHTTCEEEEEECCCCCCSTTHHHHHHHHHHHHTTSSEEEEHHHHTCC-------------------
T ss_pred             CCCCccHHHHHHHHHhccCccccccccchhhHHHHHHHHhhhcChHhhccEEEeccccccc-------------------
Confidence            578899999999986   778899997653    344445566788999999999998875                   


Q ss_pred             cccCCCCHHHHHHHHHHhCCCCCcEEEEeCChhcHHHHHHcCCeEEEECCC
Q 027403          128 RILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSS  178 (224)
Q Consensus       128 ~~~~KP~~~~~~~al~~~~~~~~~~l~VgDs~~Di~~A~~~G~~~v~v~~~  178 (224)
                          ||+|.+|+.+++++|++|++|+||||+..|+.+|+++|+++|++.++
T Consensus       159 ----KP~~~~~~~~~~~~~~~p~e~l~VgD~~~Di~~A~~~G~~ti~v~~~  205 (225)
T d1zd3a1         159 ----KPEPQIYKFLLDTLKASPSEVVFLDDIGANLKPARDLGMVTILVQDT  205 (225)
T ss_dssp             ----TTCHHHHHHHHHHHTCCGGGEEEEESCHHHHHHHHHTTCEEEECSSH
T ss_pred             ----hhHHHHHHHHhhhcccCccceeEEecCHHHHHHHHHcCCEEEEECCc
Confidence                99999999999999999999999999999999999999999999764

>d2gmwa1 c.108.1.19 (A:24-205) D,D-heptose 1,7-bisphosphate phosphatase GmhB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Histidinol phosphatase-like
domain: D,D-heptose 1,7-bisphosphate phosphatase GmhB
species: Escherichia coli [TaxId: 562]

Probab=99.67  E-value=1.6e-16  Score=127.65  Aligned_cols=133  Identities=19%  Similarity=0.195  Sum_probs=97.1

Q ss_pred             CCCCCChhHHHHHhcCC---CCeEEEeCCCh---------------HHHHHHHHHcCCcccccee-EeeccCCCCCCCCC
Q 027403           53 EKLKPDPVLRNLLLSMP---QRKIIFTNADQ---------------KHAMEVLGRLGLEDCFEGI-ICFETINPRLQPAD  113 (224)
Q Consensus        53 ~~~~~~~g~~~~L~~l~---~~~~I~Tn~~~---------------~~~~~~l~~lgl~~~fd~i-i~~~~~~~~~~~~~  113 (224)
                      +.++++||+.++|+.|+   ++++|+||.+.               ..+...+...|.  .++.+ +|......      
T Consensus        24 ~~~~~~~gv~e~l~~L~~~g~~~~ivTNq~~i~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~cp~~p~~------   95 (182)
T d2gmwa1          24 DNFEFIDGVIDAMRELKKMGFALVVVTNQSGIARGKFTEAQFETLTEWMDWSLADRDV--DLDGIYYCPHHPQG------   95 (182)
T ss_dssp             GGCCBCTTHHHHHHHHHHTTCEEEEEEECTHHHHTSSCHHHHHHHHHHHHHHHHHTTC--CCSEEEEECCBTTC------
T ss_pred             HHeeECCCHHHHHHHHhhcCchhhhhhccchhhhhhhHHHhhhhhhhhhhhhhhhhcc--cccceeeccccccc------
Confidence            45789999999999996   78999999873               233344444454  24443 33322111      


Q ss_pred             CCCCcccccCCccccccCCCCHHHHHHHHHHhCCCCCcEEEEeCChhcHHHHHHcCCeE-EEECCCCC-----CCCCceE
Q 027403          114 NTDGIENNSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHT-VIVGSSVP-----VPPADHA  187 (224)
Q Consensus       114 ~~~~~~~~~~~~~~~~~~KP~~~~~~~al~~~~~~~~~~l~VgDs~~Di~~A~~~G~~~-v~v~~~~~-----~~~~d~~  187 (224)
                      ..      .....-+..+||+|.++..++++++++|++++||||+..|+++|+++|+.+ +++.++..     ...+|++
T Consensus        96 ~~------~~~~~~~~~rKP~p~m~~~~~~~~~i~~~~s~mVGDs~~Di~aA~~Ag~~~~~lv~~g~~~~~~~~~~ad~v  169 (182)
T d2gmwa1          96 SV------EEFRQVCDCRKPHPGMLLSARDYLHIDMAASYMVGDKLEDMQAAVAANVGTKVLVRTGKPITPEAENAADWV  169 (182)
T ss_dssp             SS------GGGBSCCSSSTTSCHHHHHHHHHHTBCGGGCEEEESSHHHHHHHHHTTCSEEEEESSSSCCCHHHHHHCSEE
T ss_pred             cc------ccccccccccCCccccccchhhhcccccccccccCCCHHHHHHHHHhCCCcEEEECCCCCCCcccccCCCEE
Confidence            00      011111223699999999999999999999999999999999999999965 67777754     2348999


Q ss_pred             eCCHhHHHHHHH
Q 027403          188 LNSIHNIKEAIP  199 (224)
Q Consensus       188 i~~~~dl~~~i~  199 (224)
                      ++|+.|+.++|.
T Consensus       170 ~~~l~dl~~~ik  181 (182)
T d2gmwa1         170 LNSLADLPQAIK  181 (182)
T ss_dssp             ESCGGGHHHHHH
T ss_pred             ECCHHHHHHHhc
Confidence            999999999875

>d2g80a1 c.108.1.22 (A:17-241) Protein UTR4 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Enolase-phosphatase E1
domain: Protein UTR4
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.66  E-value=1.6e-16  Score=127.62  Aligned_cols=116  Identities=13%  Similarity=0.182  Sum_probs=93.3

Q ss_pred             CCCCChhHHHHHhcCCCCeEEEeCCChHHHHH-----------HHHHcCCccccceeEeeccCCCCCCCCCCCCCccccc
Q 027403           54 KLKPDPVLRNLLLSMPQRKIIFTNADQKHAME-----------VLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNS  122 (224)
Q Consensus        54 ~~~~~~g~~~~L~~l~~~~~I~Tn~~~~~~~~-----------~l~~lgl~~~fd~ii~~~~~~~~~~~~~~~~~~~~~~  122 (224)
                      ...+++++.+++.... ..++.|+........           .++.+|+.++|+.|++++....               
T Consensus        95 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~Fd~v~~~~~~~~---------------  158 (225)
T d2g80a1          95 KAPVYADAIDFIKRKK-RVFIYSSGSVKAQKLLFGYVQDPNAPAHDSLDLNSYIDGYFDINTSGK---------------  158 (225)
T ss_dssp             CBCCCHHHHHHHHHCS-CEEEECSSCHHHHHHHHHSBCCTTCTTSCCBCCGGGCCEEECHHHHCC---------------
T ss_pred             cccchhhHHHHHhhHH-hhhhhhhccchhhhhhhhhhhhhHHHHHHhcCCccccceeeeccccCC---------------
Confidence            4568899999998775 456777776654433           3456789999999988876543               


Q ss_pred             CCccccccCCCCHHHHHHHHHHhCCCCCcEEEEeCChhcHHHHHHcCCeEEEECCCCC----CCCCceEeCCHhHH
Q 027403          123 FSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP----VPPADHALNSIHNI  194 (224)
Q Consensus       123 ~~~~~~~~~KP~~~~~~~al~~~~~~~~~~l~VgDs~~Di~~A~~~G~~~v~v~~~~~----~~~~d~~i~~~~dl  194 (224)
                               ||+|.+|..+++++|++|++|+||||+.+|+.+|+++|+++|||.++..    ...+..++++|.||
T Consensus       159 ---------KP~p~~f~~~~~~lg~~p~e~l~VgD~~~Dv~~A~~aG~~ti~v~r~g~~~~~~~~~~~~i~~~~eL  225 (225)
T d2g80a1         159 ---------KTETQSYANILRDIGAKASEVLFLSDNPLELDAAAGVGIATGLASRPGNAPVPDGQKYQVYKNFETL  225 (225)
T ss_dssp             ---------TTCHHHHHHHHHHHTCCGGGEEEEESCHHHHHHHHTTTCEEEEECCTTSCCCCSSCCSCEESCSTTC
T ss_pred             ---------CCChhHhHHHHHhcccCchhceeecCCHHHHHHHHHcCCEEEEEeCCCCCCCcccCCCCccCChhhC
Confidence                     9999999999999999999999999999999999999999999986543    22345578888775

>d2b0ca1 c.108.1.2 (A:8-204) Putative phosphatase YihX {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: YihX-like
domain: Putative phosphatase YihX
species: Escherichia coli [TaxId: 562]

Probab=99.66  E-value=1.7e-17  Score=129.65  Aligned_cols=102  Identities=21%  Similarity=0.403  Sum_probs=90.4

Q ss_pred             CCCChhHHHHHhcCC---CCeEEEeCCChHHHHHHHHHc-CCccccceeEeeccCCCCCCCCCCCCCcccccCCcccccc
Q 027403           55 LKPDPVLRNLLLSMP---QRKIIFTNADQKHAMEVLGRL-GLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRIL  130 (224)
Q Consensus        55 ~~~~~g~~~~L~~l~---~~~~I~Tn~~~~~~~~~l~~l-gl~~~fd~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  130 (224)
                      ..+++++.+++..++   ++++++||++.......+..+ |+.++|+.++++++.+..                      
T Consensus        83 ~~~~~~~~~l~~~l~~~~~~~~i~t~~~~~~~~~~~~~~~~l~~~fd~v~~s~~~~~~----------------------  140 (197)
T d2b0ca1          83 VALRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEEYPEIRDAADHIYLSQDLGMR----------------------  140 (197)
T ss_dssp             EEECHHHHHHHHHHHHTTCEEEEEECCCCCTTSCCGGGCHHHHHHCSEEEEHHHHTCC----------------------
T ss_pred             cccCchhHHHHHHHHhcCCeEEEEeCccHHHHHHHHHHcccchhhccceeeccccccc----------------------
Confidence            467888998888875   678899999887776677775 788999999999988775                      


Q ss_pred             CCCCHHHHHHHHHHhCCCCCcEEEEeCChhcHHHHHHcCCeEEEECCCC
Q 027403          131 CKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSV  179 (224)
Q Consensus       131 ~KP~~~~~~~al~~~~~~~~~~l~VgDs~~Di~~A~~~G~~~v~v~~~~  179 (224)
                       ||+|++|..+++++|++|++|+||||+.+|+.+|+++|+++|+|..+.
T Consensus       141 -Kp~~~~~~~~~~~~~~~~~~~l~vgDs~~di~~A~~aG~~ti~v~~~~  188 (197)
T d2b0ca1         141 -KPEARIYQHVLQAEGFSPSDTVFFDDNADNIEGANQLGITSILVKDKT  188 (197)
T ss_dssp             -TTCHHHHHHHHHHHTCCGGGEEEEESCHHHHHHHHTTTCEEEECCSTT
T ss_pred             -ccchHHHHHHHHhcCCCCCeEEEEeCCHHHHHHHHHcCCEEEEECCCC
Confidence             999999999999999999999999999999999999999999997653

>d1u7pa_ c.108.1.17 (A:) Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Magnesium-dependent phosphatase-1, Mdp1
domain: Magnesium-dependent phosphatase-1, Mdp1
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.65  E-value=4.3e-16  Score=122.81  Aligned_cols=99  Identities=16%  Similarity=0.232  Sum_probs=87.7

Q ss_pred             CCCCCChhHHHHHhcCC---CCeEEEeCCCh-HHHHHHHHHcCCccccceeEeeccCCCCCCCCCCCCCcccccCCcccc
Q 027403           53 EKLKPDPVLRNLLLSMP---QRKIIFTNADQ-KHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQR  128 (224)
Q Consensus        53 ~~~~~~~g~~~~L~~l~---~~~~I~Tn~~~-~~~~~~l~~lgl~~~fd~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~  128 (224)
                      +.++++||+.++|+.|+   ++++|+||+++ ......++++++.++|+.+.+.                          
T Consensus        43 ~~~~l~pgv~e~L~~L~~~G~~~~v~S~~~~~~~~~~~l~~~~~~~~~~~~~~~--------------------------   96 (164)
T d1u7pa_          43 QNIQLYPEVPEVLGRLQSLGVPVAAASRTSEIQGANQLLELFDLGKYFIQREIY--------------------------   96 (164)
T ss_dssp             CEECCCTTHHHHHHHHHHTTCCEEEEECCSCHHHHHHHHHHTTCGGGCSEEEES--------------------------
T ss_pred             cccccchHHHHHHHHHHHCCCcEEEEeccccchhhccchhcccccccceeeecc--------------------------
Confidence            34789999999999997   78999998876 4567778999999888876533                          


Q ss_pred             ccCCCCHHHHHHHHHHhCCCCCcEEEEeCChhcHHHHHHcCCeEEEECCCC
Q 027403          129 ILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSV  179 (224)
Q Consensus       129 ~~~KP~~~~~~~al~~~~~~~~~~l~VgDs~~Di~~A~~~G~~~v~v~~~~  179 (224)
                        .||+|..|..+++++|++|++|+||||+..|+++|+++|+.+|+|.+|.
T Consensus        97 --~kp~~~~~~~~~~~~~~~~~~~l~igD~~~di~aA~~aG~~~i~v~~G~  145 (164)
T d1u7pa_          97 --PGSKVTHFERLHHKTGVPFSQMVFFDDENRNIIDVGRLGVTCIHIRDGM  145 (164)
T ss_dssp             --SSCHHHHHHHHHHHHCCCGGGEEEEESCHHHHHHHHTTTCEEEECSSCC
T ss_pred             --cCCChHHHHHHHHHhCCChHHEEEEcCCHHHHHHHHHcCCEEEEECCCC
Confidence              2999999999999999999999999999999999999999999998874

>d2o2xa1 c.108.1.19 (A:8-216) Hypothetical protein Mll2559 {Mesorhizobium loti [TaxId: 381]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Histidinol phosphatase-like
domain: Hypothetical protein Mll2559
species: Mesorhizobium loti [TaxId: 381]

Probab=99.65  E-value=2.3e-16  Score=130.26  Aligned_cols=127  Identities=13%  Similarity=0.194  Sum_probs=90.2

Q ss_pred             CCCCCChhHHHHHhcCC---CCeEEEeCCC---------------hHHHHHHHHHcCCccccceeEeeccCCCCCCCCCC
Q 027403           53 EKLKPDPVLRNLLLSMP---QRKIIFTNAD---------------QKHAMEVLGRLGLEDCFEGIICFETINPRLQPADN  114 (224)
Q Consensus        53 ~~~~~~~g~~~~L~~l~---~~~~I~Tn~~---------------~~~~~~~l~~lgl~~~fd~ii~~~~~~~~~~~~~~  114 (224)
                      +.++++||+.++|+.|+   ++++|+||.+               ...+...++..|+  +++.++.+......      
T Consensus        45 ~~~~l~pgv~e~L~~L~~~G~~l~IvTNQ~gi~~g~~~~~~~~~~~~~~~~~l~~~g~--~~~~~~~~~~~~~~------  116 (209)
T d2o2xa1          45 AEIVLRPQMLPAIATANRAGIPVVVVTNQSGIARGYFGWSAFAAVNGRVLELLREEGV--FVDMVLACAYHEAG------  116 (209)
T ss_dssp             GGCCBCGGGHHHHHHHHHHTCCEEEEEECHHHHTTSCCHHHHHHHHHHHHHHHHHTTC--CCSEEEEECCCTTC------
T ss_pred             HHeEecccHHHHHHHHHhhCCeEEEecccccchhhhhhhhhhhhhhhHHHHHhhhccc--ccceEEEecccccc------
Confidence            35789999999999996   8999999965               1234445555554  35555544332211      


Q ss_pred             CCCcccccCCccccccCCCCHHHHHHHHHHhCCCCCcEEEEeCChhcHHHHHHcCCeEEEECCCCCCCCCceEeCCHh
Q 027403          115 TDGIENNSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVPVPPADHALNSIH  192 (224)
Q Consensus       115 ~~~~~~~~~~~~~~~~~KP~~~~~~~al~~~~~~~~~~l~VgDs~~Di~~A~~~G~~~v~v~~~~~~~~~d~~i~~~~  192 (224)
                       .    ......-+.-+||+|.++..+++++++++++++||||+..|+++|+++|+.++++.+|......++.+.++.
T Consensus       117 -~----~~~~~~~~~~rKP~p~ml~~a~~~~~i~~~~~~~VGD~~~Di~aA~~AGi~~i~v~~g~~~~~~~~~~~~~~  189 (209)
T d2o2xa1         117 -V----GPLAIPDHPMRKPNPGMLVEAGKRLALDLQRSLIVGDKLADMQAGKRAGLAQGWLVDGEAAVQPGFAIRPLR  189 (209)
T ss_dssp             -C----STTCCSSCTTSTTSCHHHHHHHHHHTCCGGGCEEEESSHHHHHHHHHTTCSEEEEETCCCEEETTEEEEEES
T ss_pred             -c----ccccccccccccccchhhhHhHHHhCCCccceEEeCCCHHHHHHHHHCCCcEEEEeCCCCcccCCccccCcc
Confidence             0    000001111259999999999999999999999999999999999999999999988876444555544433

>d2fpwa1 c.108.1.19 (A:3-163) Histidine biosynthesis bifunctional protein HisB, phosphatase domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Histidinol phosphatase-like
domain: Histidine biosynthesis bifunctional protein HisB, phosphatase domain
species: Escherichia coli [TaxId: 562]

Probab=99.58  E-value=2e-16  Score=125.63  Aligned_cols=107  Identities=19%  Similarity=0.344  Sum_probs=79.5

Q ss_pred             CCCCCChhHHHHHhcCC---CCeEEEeCCC---------------hHHHHHHHHHcCCccccceeEeeccCCCCCCCCCC
Q 027403           53 EKLKPDPVLRNLLLSMP---QRKIIFTNAD---------------QKHAMEVLGRLGLEDCFEGIICFETINPRLQPADN  114 (224)
Q Consensus        53 ~~~~~~~g~~~~L~~l~---~~~~I~Tn~~---------------~~~~~~~l~~lgl~~~fd~ii~~~~~~~~~~~~~~  114 (224)
                      +.++++||+.++|+.|+   ++++|+||.+               ...+...+...|+.  ++.++.+.+...       
T Consensus        27 ~~~~~~pgv~e~L~~L~~~g~~l~i~TNq~~ia~~~~~~~~~~~~~~~l~~~l~~~~~~--~~~i~~~~~~~~-------   97 (161)
T d2fpwa1          27 DKLAFEPGVIPQLLKLQKAGYKLVMITNQDGLGTQSFPQADFDGPHNLMMQIFTSQGVQ--FDEVLICPHLPA-------   97 (161)
T ss_dssp             GGCCBCTTHHHHHHHHHHTTEEEEEEEECTTTTSTTSCHHHHHHHHHHHHHHHHHTTCC--EEEEEEECCCGG-------
T ss_pred             HHceECccHHHHHHHHHHcCCceeeecccccchhHHHHHHHhhhhhhhhhhhccccccc--cceeeecccccc-------
Confidence            45789999999999996   7889999976               23456677777763  444433322221       


Q ss_pred             CCCcccccCCccccccCCCCHHHHHHHHHHhCCCCCcEEEEeCChhcHHHHHHcCCeEEEECCCC
Q 027403          115 TDGIENNSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSV  179 (224)
Q Consensus       115 ~~~~~~~~~~~~~~~~~KP~~~~~~~al~~~~~~~~~~l~VgDs~~Di~~A~~~G~~~v~v~~~~  179 (224)
                           +++.+      +||+|.++..++++++++|++++||||+..|+++|+++|++++++.++.
T Consensus        98 -----~~~~~------~KP~p~~~~~~~~~~~id~~~~~~IGD~~~Di~aA~~aG~~~i~i~~~~  151 (161)
T d2fpwa1          98 -----DECDC------RKPKVKLVERYLAEQAMDRANSYVIGDRATDIQLAENMGINGLRYDRET  151 (161)
T ss_dssp             -----GCCSS------STTSSGGGGGGC----CCGGGCEEEESSHHHHHHHHHHTSEEEECBTTT
T ss_pred             -----ccccc------cccccHHHHHHHHhcCCChhcEEEECCCHHHHHHHHHcCCeEEEECCCC
Confidence                 11112      4999999999999999999999999999999999999999999997654

>d2c4na1 c.108.1.14 (A:1-250) NagD {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: NagD-like
domain: NagD
species: Escherichia coli [TaxId: 562]

Probab=99.34  E-value=6e-14  Score=116.83  Aligned_cols=66  Identities=27%  Similarity=0.330  Sum_probs=59.3

Q ss_pred             cCCCCHHHHHHHHHHhCCCCCcEEEEeCChh-cHHHHHHcCCeEEEECCCCC--------CCCCceEeCCHhHHH
Q 027403          130 LCKPSLEAIETAIRIANVDPKKTIFFDDSAR-NIASAKAAGLHTVIVGSSVP--------VPPADHALNSIHNIK  195 (224)
Q Consensus       130 ~~KP~~~~~~~al~~~~~~~~~~l~VgDs~~-Di~~A~~~G~~~v~v~~~~~--------~~~~d~~i~~~~dl~  195 (224)
                      .+||+|.+|+.+++++|++|++|+||||++. ||.+|+++|+++++|.+|..        ...|||+++|+.||.
T Consensus       174 ~~KP~p~~~~~a~~~lgi~p~e~v~IGD~~~~DI~~a~~aG~~tilV~~G~~~~~~l~~~~~~pd~i~~sl~eL~  248 (250)
T d2c4na1         174 VGKPSPWIIRAALNKMQAHSEETVIVGDNLRTDILAGFQAGLETILVLSGVSSLDDIDSMPFRPSWIYPSVAEID  248 (250)
T ss_dssp             CSTTSTHHHHHHHHHHTCCGGGEEEEESCTTTHHHHHHHTTCEEEEESSSSCCGGGGSSCSSCCSEEESSGGGCC
T ss_pred             cccchhhhHhhhhhhhcCCchheEEecCChHHHHHHHHHCCCCEEEECCCCCCHHHHHhCCCCCCEEECCHHHhC
Confidence            3599999999999999999999999999985 99999999999999998853        234799999999874

>d1vjra_ c.108.1.14 (A:) Hypothetical protein TM1742 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: NagD-like
domain: Hypothetical protein TM1742
species: Thermotoga maritima [TaxId: 2336]

Probab=99.33  E-value=1.2e-12  Score=108.81  Aligned_cols=68  Identities=15%  Similarity=0.266  Sum_probs=62.4

Q ss_pred             CCCCHHHHHHHHHHhCCCCCcEEEEeCCh-hcHHHHHHcCCeEEEECCCCC--------CCCCceEeCCHhHHHHHH
Q 027403          131 CKPSLEAIETAIRIANVDPKKTIFFDDSA-RNIASAKAAGLHTVIVGSSVP--------VPPADHALNSIHNIKEAI  198 (224)
Q Consensus       131 ~KP~~~~~~~al~~~~~~~~~~l~VgDs~-~Di~~A~~~G~~~v~v~~~~~--------~~~~d~~i~~~~dl~~~i  198 (224)
                      +||+|.+|..+++++|++|++++||||+. +||.+|+++|++++||.+|..        ...|||+++|+.||.++|
T Consensus       184 ~KP~p~~~~~a~~~l~~~~~~~lmVGD~~~~DI~ga~~aG~~si~V~~G~~~~~~~~~~~~~PD~ii~~l~eL~~~l  260 (261)
T d1vjra_         184 GKPNPLVVDVISEKFGVPKERMAMVGDRLYTDVKLGKNAGIVSILVLTGETTPEDLERAETKPDFVFKNLGELAKAV  260 (261)
T ss_dssp             STTSTHHHHHHHHHHTCCGGGEEEEESCHHHHHHHHHHHTCEEEEESSSSCCHHHHHHCSSCCSEEESSHHHHHHHH
T ss_pred             CCCcHHHHHHHHhhhccCchhcceecCChhHHHHHHHHCCCcEEEECCCCCCHHHHhhcCCCCCEEECCHHHHHHHh
Confidence            59999999999999999999999999997 599999999999999998853        345799999999999876

>d1wvia_ c.108.1.14 (A:) Putative phosphatase SMU.1415c {Streptococcus mutans [TaxId: 1309]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: NagD-like
domain: Putative phosphatase SMU.1415c
species: Streptococcus mutans [TaxId: 1309]

Probab=99.32  E-value=1.3e-12  Score=108.77  Aligned_cols=65  Identities=18%  Similarity=0.275  Sum_probs=58.0

Q ss_pred             cCCCCHHHHHHHHHHhCCCCCcEEEEeCChh-cHHHHHHcCCeEEEECCCCC--------CCCCceEeCCHhHH
Q 027403          130 LCKPSLEAIETAIRIANVDPKKTIFFDDSAR-NIASAKAAGLHTVIVGSSVP--------VPPADHALNSIHNI  194 (224)
Q Consensus       130 ~~KP~~~~~~~al~~~~~~~~~~l~VgDs~~-Di~~A~~~G~~~v~v~~~~~--------~~~~d~~i~~~~dl  194 (224)
                      .+||+|.+|+.+++++|++|++|+||||++. ||.+|+++|+++++|.+|..        ...||++++|+.|+
T Consensus       178 ~gKP~p~~~~~al~~l~i~~~~~~mIGDs~~~DI~gA~~aG~~si~V~~G~~~~~~~~~~~~~PD~vi~sl~e~  251 (253)
T d1wvia_         178 IGKPEAVIMNKALDRLGVKRHEAIMVGDNYLTDITAGIKNDIATLLVTTGFTKPEEVPALPIQPDFVLSSLAEW  251 (253)
T ss_dssp             CSTTSHHHHHHHHHHHTSCGGGEEEEESCTTTTHHHHHHTTCEEEEESSSSSCTTTGGGCSSCCSEEESCGGGC
T ss_pred             eccCCcccceehhhhccccccceEEEcCChHHHHHHHHHCCCCEEEECCCCCCHHHHhhcCCCCCEEECCHHHc
Confidence            3599999999999999999999999999975 99999999999999988742        23369999999885

>d2feaa1 c.108.1.20 (A:2-227) 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: MtnX-like
domain: 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX
species: Bacillus subtilis [TaxId: 1423]

Probab=99.32  E-value=5.7e-13  Score=107.78  Aligned_cols=138  Identities=11%  Similarity=-0.014  Sum_probs=98.9

Q ss_pred             CCCCChhHHHHHhcCC---CCeEEEeCCChHHHHHHHHHcCCcccccee--EeeccCCCCCCCCCCCCCcccccCCcccc
Q 027403           54 KLKPDPVLRNLLLSMP---QRKIIFTNADQKHAMEVLGRLGLEDCFEGI--ICFETINPRLQPADNTDGIENNSFSSNQR  128 (224)
Q Consensus        54 ~~~~~~g~~~~L~~l~---~~~~I~Tn~~~~~~~~~l~~lgl~~~fd~i--i~~~~~~~~~~~~~~~~~~~~~~~~~~~~  128 (224)
                      .++++||+.++|+.|+   .+++|+||+....+...++++|+.++|...  ...++...            ...-.+...
T Consensus        73 ~~~l~pg~~~~l~~L~~~g~~~~ivS~~~~~~i~~~l~~l~~~~~~~an~~~~~~~~~~------------~~~~~~~~~  140 (226)
T d2feaa1          73 DAKIREGFREFVAFINEHEIPFYVISGGMDFFVYPLLEGIVEKDRIYCNHASFDNDYIH------------IDWPHSCKG  140 (226)
T ss_dssp             HCCBCTTHHHHHHHHHHHTCCEEEEEEEEHHHHHHHHTTTSCGGGEEEEEEECSSSBCE------------EECTTCCCT
T ss_pred             ccchhHHHHHHHHHHHhcccccccCCcchhhhHHHHHHHcCCccceeeeeEEEeCCcce------------ecccccccc
Confidence            4678999999999996   789999999999999999999987666321  11111100            000011111


Q ss_pred             ccCCCCHHHHHHHHHHhCCCCCcEEEEeCChhcHHHHHHcCCeEEEECCCCC----CCCCceEeCCHhHHHHHHHHHHhh
Q 027403          129 ILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP----VPPADHALNSIHNIKEAIPEIWEG  204 (224)
Q Consensus       129 ~~~KP~~~~~~~al~~~~~~~~~~l~VgDs~~Di~~A~~~G~~~v~v~~~~~----~~~~d~~i~~~~dl~~~i~~~~~~  204 (224)
                      .-++|++.....+++++++++++|+|||||.+|+.+|+++|+.+ .+.+...    ...+...++++.|+...|+++.+.
T Consensus       141 ~~~~~k~~~~~~~~~~~~~~~~~~i~iGDs~~Dl~~a~~A~~~~-a~~~~~~~~~~~~~~~~~~~d~~~i~~~l~~~~~~  219 (226)
T d2feaa1         141 TCSNQCGCCKPSVIHELSEPNQYIIMIGDSVTDVEAAKLSDLCF-ARDYLLNECREQNLNHLPYQDFYEIRKEIENVKEV  219 (226)
T ss_dssp             TCCSCCSSCHHHHHHHHCCTTCEEEEEECCGGGHHHHHTCSEEE-ECHHHHHHHHHTTCCEECCSSHHHHHHHHHTSHHH
T ss_pred             ccccCCHHHHHHHHHHhcCCCceEEEEeCchhhHHHHHHCCEEE-EecchHHHHHHcCCCeeecCCHHHHHHHHHHHHHH
Confidence            22488888899999999999999999999999999999999743 2222111    233455689999999988877543

>d1yv9a1 c.108.1.14 (A:4-256) Putative hydrolase EF1188 {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: NagD-like
domain: Putative hydrolase EF1188
species: Enterococcus faecalis [TaxId: 1351]

Probab=99.27  E-value=3.7e-12  Score=105.68  Aligned_cols=65  Identities=23%  Similarity=0.377  Sum_probs=58.1

Q ss_pred             cCCCCHHHHHHHHHHhCCCCCcEEEEeCChh-cHHHHHHcCCeEEEECCCCC--------CCCCceEeCCHhHH
Q 027403          130 LCKPSLEAIETAIRIANVDPKKTIFFDDSAR-NIASAKAAGLHTVIVGSSVP--------VPPADHALNSIHNI  194 (224)
Q Consensus       130 ~~KP~~~~~~~al~~~~~~~~~~l~VgDs~~-Di~~A~~~G~~~v~v~~~~~--------~~~~d~~i~~~~dl  194 (224)
                      .+||+|.+|..+++.+|++|++|+||||+.. ||++|+++|+++++|.+|..        ...|||+++|+.|+
T Consensus       178 ~~KP~~~~~~~~~~~~gi~~~~~l~IGD~~~~DI~~a~~aG~~si~V~~G~~~~~~~~~~~~~Pd~vi~sl~e~  251 (253)
T d1yv9a1         178 IGKPKAIIMERAIAHLGVEKEQVIMVGDNYETDIQSGIQNGIDSLLVTSGFTPKSAVPTLPTPPTYVVDSLDEW  251 (253)
T ss_dssp             CSTTSHHHHHHHHHHHCSCGGGEEEEESCTTTHHHHHHHHTCEEEEETTSSSCSSSTTTCSSCCSEEESSGGGC
T ss_pred             ecccchhHHHHHHHHhCCCccceEEecCChHHHHHHHHHCCCCEEEECCCCCCHHHHHhcCCCCCEEECCHHHc
Confidence            3599999999999999999999999999975 99999999999999988742        33479999999885

>d1nnla_ c.108.1.4 (A:) Phosphoserine phosphatase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Phosphoserine phosphatase
domain: Phosphoserine phosphatase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.96  E-value=5.2e-10  Score=90.98  Aligned_cols=131  Identities=11%  Similarity=0.095  Sum_probs=87.6

Q ss_pred             CCCCCChhHHHHHhcCC---CCeEEEeCCChHHHHHHHHHcCCccccceeEeeccCCCCCCCCCCCCCcccccCCccccc
Q 027403           53 EKLKPDPVLRNLLLSMP---QRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRI  129 (224)
Q Consensus        53 ~~~~~~~g~~~~L~~l~---~~~~I~Tn~~~~~~~~~l~~lgl~~~fd~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  129 (224)
                      ...+++||+.++++.|+   ++++|+|++....+..+++.+|+..+  .+++.+-...       .+|.+.....+++..
T Consensus        79 ~~~~l~pg~~~~i~~lk~~G~~~~ivS~~~~~~v~~i~~~lgi~~~--~v~an~~~~~-------~~G~~~g~~~~~p~~  149 (217)
T d1nnla_          79 QPPHLTPGIRELVSRLQERNVQVFLISGGFRSIVEHVASKLNIPAT--NVFANRLKFY-------FNGEYAGFDETQPTA  149 (217)
T ss_dssp             SCCCBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCCGG--GEEEECEEEC-------TTSCEEEECTTSGGG
T ss_pred             hccccCHHHHHHHHHHHhCCCEEEEECCCchHHHHHHHHHhCCccc--ceeeeeeeee-------ehhccccceeeeeee
Confidence            34678999999999997   78999999999999999999998642  2332210000       011111111222223


Q ss_pred             cCCCCHHHHHHHHHHhCCCCCcEEEEeCChhcHHHHHHcCCeEEEEC-CCCC---CCCCceEeCCHhHHH
Q 027403          130 LCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVG-SSVP---VPPADHALNSIHNIK  195 (224)
Q Consensus       130 ~~KP~~~~~~~al~~~~~~~~~~l~VgDs~~Di~~A~~~G~~~v~v~-~~~~---~~~~d~~i~~~~dl~  195 (224)
                      .++.+..+.....++  .++++|++||||.+|+.+++.+|+. +.+. .+..   ...+++++.|+.||.
T Consensus       150 ~~~~K~~~v~~~~~~--~~~~~~~~vGDs~~Di~~~~~ag~~-va~~~~~~~~~~~~~ad~~i~~f~ell  216 (217)
T d1nnla_         150 ESGGKGKVIKLLKEK--FHFKKIIMIGDGATDMEACPPADAF-IGFGGNVIRQQVKDNAKWYITDFVELL  216 (217)
T ss_dssp             STTHHHHHHHHHHHH--HCCSCEEEEESSHHHHTTTTTSSEE-EEECSSCCCHHHHHHCSEEESCGGGGC
T ss_pred             ccchHHHHHHHHHhc--cCccccEEEEeCHhhHHHHHhCCce-EEECCCHHHHHHHHhCCCEeCCHHHhc
Confidence            334455666666554  4578999999999999999999986 4444 2221   234899999998863

>d1j97a_ c.108.1.4 (A:) Phosphoserine phosphatase {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Phosphoserine phosphatase
domain: Phosphoserine phosphatase
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=98.80  E-value=1.2e-09  Score=85.42  Aligned_cols=128  Identities=16%  Similarity=0.216  Sum_probs=96.1

Q ss_pred             CCCChhHHHHHhcCC---CCeEEEeCCChHHHHHHHHHcCCccccceeEeeccCCCCCCCCCCCCCcccccCCccccccC
Q 027403           55 LKPDPVLRNLLLSMP---QRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILC  131 (224)
Q Consensus        55 ~~~~~g~~~~L~~l~---~~~~I~Tn~~~~~~~~~l~~lgl~~~fd~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  131 (224)
                      ..+++++.+.+..++   ...+++|++....+....++.+...++......++....             ...+.....+
T Consensus        74 ~~~~~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~  140 (210)
T d1j97a_          74 ITPTEGAEETIKELKNRGYVVAVVSGGFDIAVNKIKEKLGLDYAFANRLIVKDGKLT-------------GDVEGEVLKE  140 (210)
T ss_dssp             CCBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCSEEEEEEEEEETTEEE-------------EEEECSSCST
T ss_pred             hhhhhhHHHHHHHHHHcCCEEEeecccccccccchhhccchhhhhhhhhcccccccc-------------cccccccccc
Confidence            578889999998886   668899999999999999999988777765554443221             1111122235


Q ss_pred             CCCHHHHHHHHHHhCCCCCcEEEEeCChhcHHHHHHcCCeEEEECCCCC--CCCCceEeC--CHhHHHHH
Q 027403          132 KPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP--VPPADHALN--SIHNIKEA  197 (224)
Q Consensus       132 KP~~~~~~~al~~~~~~~~~~l~VgDs~~Di~~A~~~G~~~v~v~~~~~--~~~~d~~i~--~~~dl~~~  197 (224)
                      ++++......++.++++++++++||||.+|+..++.+|+. |.+ .+.+  ...+++++.  |+.+|.++
T Consensus       141 ~~~~~~~~~~~~~~~~~~~~~i~iGDs~nDi~m~~~ag~~-va~-na~~~lk~~Ad~vi~~~d~~~vl~~  208 (210)
T d1j97a_         141 NAKGEILEKIAKIEGINLEDTVAVGDGANDISMFKKAGLK-IAF-CAKPILKEKADICIEKRDLREILKY  208 (210)
T ss_dssp             THHHHHHHHHHHHHTCCGGGEEEEESSGGGHHHHHHCSEE-EEE-SCCHHHHTTCSEEECSSCGGGGGGG
T ss_pred             ccccchhhhHHHHhcccccceEEecCCcChHHHHHHCCCC-EEE-CCCHHHHHhCCEEEcCCCHHHHHHH
Confidence            7889999999999999999999999999999999999986 445 4433  456899987  45566544

>d1ltqa1 c.108.1.9 (A:153-301) Polynucleotide kinase, phosphatase domain {Bacteriophage T4 [TaxId: 10665]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: phosphatase domain of polynucleotide kinase
domain: Polynucleotide kinase, phosphatase domain
species: Bacteriophage T4 [TaxId: 10665]

Probab=98.77  E-value=8.4e-09  Score=77.96  Aligned_cols=100  Identities=9%  Similarity=-0.009  Sum_probs=70.3

Q ss_pred             CCCChhHHHHHhcCC---CCeEEEeCCChH---HHHHHHHHcC-----C-ccccceeEeeccCCCCCCCCCCCCCccccc
Q 027403           55 LKPDPVLRNLLLSMP---QRKIIFTNADQK---HAMEVLGRLG-----L-EDCFEGIICFETINPRLQPADNTDGIENNS  122 (224)
Q Consensus        55 ~~~~~g~~~~L~~l~---~~~~I~Tn~~~~---~~~~~l~~lg-----l-~~~fd~ii~~~~~~~~~~~~~~~~~~~~~~  122 (224)
                      ..++|++.++|+.|+   ++++++||++..   .+...++..+     + ...++.........                
T Consensus        35 ~~~~p~v~~~l~~l~~~G~~Iii~T~R~~~~~~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~----------------   98 (149)
T d1ltqa1          35 DVINPMVVELSKMYALMGYQIVVVSGRESGTKEDPTKYYRMTRKWVEDIAGVPLVMQCQREQGD----------------   98 (149)
T ss_dssp             CCBCHHHHHHHHHHHHTTCEEEEEECSCCCCSSSTTHHHHHHHHHHHHTTCCCCSEEEECCTTC----------------
T ss_pred             CccCHHHHHHHHHHHhccCeEEEEecCcHHHHHHHHHHHHHHhhhhhhcCCCcEEEeecccccc----------------
Confidence            478999999999996   789999998732   2222232211     1 12233333222222                


Q ss_pred             CCccccccCCCCHHHHHHHHHHhCCCCCc-EEEEeCChhcHHHHHHcCCeEEEECCC
Q 027403          123 FSSNQRILCKPSLEAIETAIRIANVDPKK-TIFFDDSARNIASAKAAGLHTVIVGSS  178 (224)
Q Consensus       123 ~~~~~~~~~KP~~~~~~~al~~~~~~~~~-~l~VgDs~~Di~~A~~~G~~~v~v~~~  178 (224)
                              .+|+.......++++..++.+ +++|||+..|+++|+++|++|+.|.+|
T Consensus        99 --------~~~d~~~k~~~l~~~~~~~~~i~~~igD~~~dv~a~~~~Gi~~~~V~~G  147 (149)
T d1ltqa1          99 --------TRKDDVVKEEIFWKHIAPHFDVKLAIDDRTQVVEMWRRIGVECWQVASG  147 (149)
T ss_dssp             --------CSCHHHHHHHHHHHHTTTTCEEEEEEECCHHHHHHHHHTTCCEEECSCC
T ss_pred             --------cCCchHHHHHHHHHhccCCCceEEEEcCCHHHHHHHHHCCCcEEEeCCC
Confidence                    277778888888888776666 467899999999999999999999887

>d1yj5a1 c.108.1.9 (A:144-338) 5' polynucleotide kinase-3' phosphatase, middle domain {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: phosphatase domain of polynucleotide kinase
domain: 5' polynucleotide kinase-3' phosphatase, middle domain
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.61  E-value=3.2e-08  Score=80.07  Aligned_cols=92  Identities=23%  Similarity=0.278  Sum_probs=70.5

Q ss_pred             CChhHHHHHhcCC---CCeEEEeCCC--------h----HHHHHHHHHcCCccccceeEeeccCCCCCCCCCCCCCcccc
Q 027403           57 PDPVLRNLLLSMP---QRKIIFTNAD--------Q----KHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENN  121 (224)
Q Consensus        57 ~~~g~~~~L~~l~---~~~~I~Tn~~--------~----~~~~~~l~~lgl~~~fd~ii~~~~~~~~~~~~~~~~~~~~~  121 (224)
                      .+|++.+.|+.|+   +.++|+||.+        .    ......++.++..  ++..+|..+-..              
T Consensus        51 l~~~v~~~i~~L~~~gy~iiIvTNQ~gI~rg~~s~~~~~~~~~~i~~~l~~~--~~i~~~~~~~~~--------------  114 (195)
T d1yj5a1          51 LYPEIPKKLQELAAEGYKLVIFTNQMGIGRGKLPAEVFKGKVEAVLEKLGVP--FQVLVATHAGLN--------------  114 (195)
T ss_dssp             SCTTHHHHHHHHHHHTCEEEEEEECHHHHHTSSCHHHHHHHHHHHHHHHTSC--CEEEEECSSSSS--------------
T ss_pred             ccCCHHHHHHHHHhCCcEEEEecCcchhccCCcCHHHHHHHHHHHHHHcCCC--ccEEEecCcccc--------------
Confidence            3699999999995   8899999975        1    2345566666643  333444444333              


Q ss_pred             cCCccccccCCCCHHHHHHHHHHhC----CCCCcEEEEeCCh-----------------hcHHHHHHcCCeEE
Q 027403          122 SFSSNQRILCKPSLEAIETAIRIAN----VDPKKTIFFDDSA-----------------RNIASAKAAGLHTV  173 (224)
Q Consensus       122 ~~~~~~~~~~KP~~~~~~~al~~~~----~~~~~~l~VgDs~-----------------~Di~~A~~~G~~~v  173 (224)
                               +||++.++..++++.+    ++.++++||||..                 .|++.|.++|+++.
T Consensus       115 ---------RKP~~GM~~~~~~~~n~~~~id~~~S~~IGD~~gr~~~~~~~~~~~D~S~sD~~fA~N~gikF~  178 (195)
T d1yj5a1         115 ---------RKPVSGMWDHLQEQANEGIPISVEDSVFVGDAAGRLANWAPGRKKKDFSCADRLFALNVGLPFA  178 (195)
T ss_dssp             ---------STTSTHHHHHHHHTSSSSCCCCGGGCEEECSCCCBCTTSBTTBCSCCSCCHHHHHHHHHTCCEE
T ss_pred             ---------CCCccHHHHHHHHHhcccccCCcCceEEEeCccCccccccccccccCcchhHHHHHHHCCCccc
Confidence                     4999999999999986    7889999999954                 89999999999964

>d1k1ea_ c.108.1.5 (A:) Probable phosphatase YrbI {Haemophilus influenzae, HI1679 [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Probable phosphatase YrbI
domain: Probable phosphatase YrbI
species: Haemophilus influenzae, HI1679 [TaxId: 727]

Probab=98.23  E-value=4.2e-06  Score=66.05  Aligned_cols=105  Identities=17%  Similarity=0.257  Sum_probs=83.1

Q ss_pred             HHHHhcCCCCeEEEeCCChHHHHHHHHHcCCccccceeEeeccCCCCCCCCCCCCCcccccCCccccccCCCCHHHHHHH
Q 027403           62 RNLLLSMPQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCKPSLEAIETA  141 (224)
Q Consensus        62 ~~~L~~l~~~~~I~Tn~~~~~~~~~l~~lgl~~~fd~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~~~~~~~a  141 (224)
                      ...|+.....++++|......+......+++...+..                                .+++...++..
T Consensus        41 i~~l~~~gi~~~iis~~~~~~v~~~~~~l~~~~~~~~--------------------------------~~~K~~~l~~~   88 (177)
T d1k1ea_          41 IKMLMDADIQVAVLSGRDSPILRRRIADLGIKLFFLG--------------------------------KLEKETACFDL   88 (177)
T ss_dssp             HHHHHHTTCEEEEEESCCCHHHHHHHHHHTCCEEEES--------------------------------CSCHHHHHHHH
T ss_pred             HHHHhhhcEEEEEecCCchhHHHHHHhhhcccccccc--------------------------------cccHHHHHHHH
Confidence            4566777788999999999999999999887654432                                27788889999


Q ss_pred             HHHhCCCCCcEEEEeCChhcHHHHHHcCCeEEEECCCCC--CCCCceEeCC------HhHHHHHHH
Q 027403          142 IRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP--VPPADHALNS------IHNIKEAIP  199 (224)
Q Consensus       142 l~~~~~~~~~~l~VgDs~~Di~~A~~~G~~~v~v~~~~~--~~~~d~~i~~------~~dl~~~i~  199 (224)
                      ++++++++++|+||||+.+|+..-+.+|+. +.+.+..+  ...++|+..+      ++|+.+.|.
T Consensus        89 ~~~~~i~~~~v~~vGDd~nDl~~l~~~g~s-iap~nA~~~vk~~A~~Vt~~~GG~GavrE~~e~il  153 (177)
T d1k1ea_          89 MKQAGVTAEQTAYIGDDSVDLPAFAACGTS-FAVADAPIYVKNAVDHVLSTHGGKGAFREMSDMIL  153 (177)
T ss_dssp             HHHHTCCGGGEEEEECSGGGHHHHHHSSEE-EECTTSCHHHHTTSSEECSSCTTTTHHHHHHHHHH
T ss_pred             HHHhcCCcceeEEecCCccHHHHHhhCCeE-EEcCCccHHHHHhCCEEeCCCCCCchHHHHHHHHH
Confidence            999999999999999999999999999984 66666544  5668888877      455554443

>d1wr8a_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Phosphoglycolate phosphatase, PGPase
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=98.17  E-value=2.6e-06  Score=66.93  Aligned_cols=75  Identities=24%  Similarity=0.221  Sum_probs=61.9

Q ss_pred             CCCCHHHHHHHHHHhCCCCCcEEEEeCChhcHHHHHHcCCeEEEECCCCC--CCCCceEeCC--HhHHHHHHHHHHhhcC
Q 027403          131 CKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP--VPPADHALNS--IHNIKEAIPEIWEGEG  206 (224)
Q Consensus       131 ~KP~~~~~~~al~~~~~~~~~~l~VgDs~~Di~~A~~~G~~~v~v~~~~~--~~~~d~~i~~--~~dl~~~i~~~~~~~~  206 (224)
                      +.+++..+..++++++++++++++|||+.||+..++.+|+ .+.+.++.+  ...+++++.+  ...+.++|.+++++-|
T Consensus       150 ~~~K~~al~~l~~~~~i~~~~~~~iGD~~NDi~ml~~ag~-~vav~na~~~~k~~A~~v~~~~~~~gv~~~i~~~l~~~g  228 (230)
T d1wr8a_         150 WINKGSGIEKASEFLGIKPKEVAHVGDGENDLDAFKVVGY-KVAVAQAPKILKENADYVTKKEYGEGGAEAIYHILEKFG  228 (230)
T ss_dssp             TCCHHHHHHHHHHHHTSCGGGEEEEECSGGGHHHHHHSSE-EEECTTSCHHHHTTCSEECSSCHHHHHHHHHHHHHHHTT
T ss_pred             CcCcchhhcccccccccchhheeeeecCccHHHHHHHCCe-EEEECCCCHHHHHhCCEEECCCCcCHHHHHHHHHHHHcC
Confidence            5889999999999999999999999999999999999997 477766654  4558998865  3457888888776543

>d1rkua_ c.108.1.11 (A:) Homoserine kinase ThrH {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Homoserine kinase ThrH
domain: Homoserine kinase ThrH
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=98.01  E-value=9.6e-06  Score=62.34  Aligned_cols=126  Identities=10%  Similarity=0.044  Sum_probs=87.2

Q ss_pred             CCCChhHHHHHhcCC--CCeEEEeCCChHHHHHHHHHcCCccccceeEeeccCCCCCCCCCCCCCcccccCCccccccCC
Q 027403           55 LKPDPVLRNLLLSMP--QRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCK  132 (224)
Q Consensus        55 ~~~~~g~~~~L~~l~--~~~~I~Tn~~~~~~~~~l~~lgl~~~fd~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~K  132 (224)
                      +...++.......++  .+.+++|.+...........++...++............                   .....
T Consensus        68 ~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-------------------~~~~~  128 (206)
T d1rkua_          68 LKPLEGAVEFVDWLRERFQVVILSDTFYEFSQPLMRQLGFPTLLCHKLEIDDSDRV-------------------VGYQL  128 (206)
T ss_dssp             CCCCTTHHHHHHHHHTTSEEEEEEEEEHHHHHHHHHHTTCCCEEEEEEEECTTSCE-------------------EEEEC
T ss_pred             ccccchHHHHHHHhhcCceEEEeccCchHHHHHHHHHhCCchhhcceeeeeccccc-------------------ccccc
Confidence            566677777766554  677899999888888899988876555443322211100                   00114


Q ss_pred             CCHHHHHHHHHHhCCCCCcEEEEeCChhcHHHHHHcCCeEEEECCCCC--CCCCce-EeCCHhHHHHHHHH
Q 027403          133 PSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP--VPPADH-ALNSIHNIKEAIPE  200 (224)
Q Consensus       133 P~~~~~~~al~~~~~~~~~~l~VgDs~~Di~~A~~~G~~~v~v~~~~~--~~~~d~-~i~~~~dl~~~i~~  200 (224)
                      +++......++.++.++++|++|||+.||+...+.+|+. |.++.+..  ...+++ ..+++.|+.+.|..
T Consensus       129 ~~~~~~~~~~~~~~i~~~eviaiGDg~NDi~Ml~~Ag~g-IAmna~~~v~~~~~~~~~~~~~~d~~~~~~~  198 (206)
T d1rkua_         129 RQKDPKRQSVIAFKSLYYRVIAAGDSYNDTTMLSEAHAG-ILFHAPENVIREFPQFPAVHTYEDLKREFLK  198 (206)
T ss_dssp             CSSSHHHHHHHHHHHTTCEEEEEECSSTTHHHHHHSSEE-EEESCCHHHHHHCTTSCEECSHHHHHHHHHH
T ss_pred             cchhhHHHHHHHhcccccceEEecCCccCHHHHHhCCcc-EEECCCHHHHHhCCCceeecCHHHHHHHHHH
Confidence            445556778889999999999999999999999999996 55543321  344677 47889998876654

>d1l6ra_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Archaeon Thermoplasma acidophilum [TaxId: 2303]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Phosphoglycolate phosphatase, PGPase
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

Probab=97.78  E-value=3.2e-05  Score=61.33  Aligned_cols=67  Identities=7%  Similarity=0.064  Sum_probs=50.9

Q ss_pred             CCCCHHHHHHHHHHhCCCCCcEEEEeCChhcHHHHHHcCCeEEEECCCCC--CCCCceEeCCH--hHHHHHH
Q 027403          131 CKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP--VPPADHALNSI--HNIKEAI  198 (224)
Q Consensus       131 ~KP~~~~~~~al~~~~~~~~~~l~VgDs~~Di~~A~~~G~~~v~v~~~~~--~~~~d~~i~~~--~dl~~~i  198 (224)
                      +-.+..+.+.+++++|+++++|++||||.||+..+..+|. ++.+.++.+  ...+|+++.+-  ..+.+++
T Consensus       149 ~~~K~~ai~~l~~~~~i~~~~v~~~GDs~nD~~m~~~a~~-~vav~na~~~~k~~ad~v~~~~~~~gi~~~l  219 (225)
T d1l6ra_         149 GEDKAFAVNKLKEMYSLEYDEILVIGDSNNDMPMFQLPVR-KACPANATDNIKAVSDFVSDYSYGEEIGQIF  219 (225)
T ss_dssp             TCSHHHHHHHHHHHTTCCGGGEEEECCSGGGHHHHTSSSE-EEECTTSCHHHHHHCSEECSCCTTHHHHHHH
T ss_pred             ccchHHHHHHHhhhhccchhheeeecCCcchHHHHHHCCe-EEEECCCcHHHHHhCCEEECCCCcCHHHHHH
Confidence            3455778899999999999999999999999999999996 567766543  33478876443  4444443

>d2b8ea1 c.108.1.7 (A:416-434,A:548-663) Cation-transporting ATPase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Meta-cation ATPase, catalytic domain P
domain: Cation-transporting ATPase
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=97.72  E-value=0.00016  Score=54.28  Aligned_cols=106  Identities=15%  Similarity=0.202  Sum_probs=72.2

Q ss_pred             CChhHHHHHhcCC---CCeEEEeCCChHHHHHHHHHcCCccccceeEeeccCCCCCCCCCCCCCcccccCCccccccCCC
Q 027403           57 PDPVLRNLLLSMP---QRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCKP  133 (224)
Q Consensus        57 ~~~g~~~~L~~l~---~~~~I~Tn~~~~~~~~~l~~lgl~~~fd~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP  133 (224)
                      +.|++.+.++.|+   .++.++|+-....+...-+.+|+..+|-                                  --
T Consensus        22 lr~~a~~~I~~L~~~Gi~v~ilTGD~~~~a~~ia~~lgI~~v~~----------------------------------~~   67 (135)
T d2b8ea1          22 LKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLDLVIA----------------------------------EV   67 (135)
T ss_dssp             BCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCSEEEC----------------------------------SC
T ss_pred             CCccHHHHHHHHHHcCCEEEEEcCcchhhhhHHHhhhhhhhhcc----------------------------------cc
Confidence            5567777776665   7889999999998998989999854432                                  11


Q ss_pred             CHHHHHHHHHHhCCCCCcEEEEeCChhcHHHHHHcCCeEEEECCCCC--CCCCceEe--CCHhHHHHHH
Q 027403          134 SLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP--VPPADHAL--NSIHNIKEAI  198 (224)
Q Consensus       134 ~~~~~~~al~~~~~~~~~~l~VgDs~~Di~~A~~~G~~~v~v~~~~~--~~~~d~~i--~~~~dl~~~i  198 (224)
                      .|.--...+++++.. ..+.||||+.||..+-+.+++. +.+..+..  ...+|+++  +++..|.+.|
T Consensus        68 ~p~~k~~~v~~~q~~-~~v~~vGDg~nD~~aL~~Advg-ia~~~~~~~~~~aADivl~~~~l~~i~~aI  134 (135)
T d2b8ea1          68 LPHQKSEEVKKLQAK-EVVAFVGDGINDAPALAQADLG-IAVGSGSDVAVESGDIVLIRDDLRDVVAAI  134 (135)
T ss_dssp             CHHHHHHHHHHHTTT-SCEEEEECSSSSHHHHHHSSEE-EEECCC--------SEEESSCCTHHHHHHH
T ss_pred             chhHHHHHHHHHHcC-CEEEEEeCCCCcHHHHHhCCee-eecCccCHHHHHhCCEEEECCCHHHHHHHh
Confidence            233333455566543 6799999999999999999875 55555443  45588887  5577777655

>d2b82a1 c.108.1.12 (A:4-212) Class B acid phosphatase, AphA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Class B acid phosphatase, AphA
domain: Class B acid phosphatase, AphA
species: Escherichia coli [TaxId: 562]

Probab=97.64  E-value=2.8e-05  Score=62.92  Aligned_cols=92  Identities=15%  Similarity=0.236  Sum_probs=63.6

Q ss_pred             CCCChhHHHHHhcCC---CCeEEEeCCCh---HHHHHHH-HHcCCccc-ccee-EeeccCCCCCCCCCCCCCcccccCCc
Q 027403           55 LKPDPVLRNLLLSMP---QRKIIFTNADQ---KHAMEVL-GRLGLEDC-FEGI-ICFETINPRLQPADNTDGIENNSFSS  125 (224)
Q Consensus        55 ~~~~~g~~~~L~~l~---~~~~I~Tn~~~---~~~~~~l-~~lgl~~~-fd~i-i~~~~~~~~~~~~~~~~~~~~~~~~~  125 (224)
                      -.|.||+.++++.+.   .+++.+||++.   +.+...| +.+|+... .+.+ ++.+. ..                  
T Consensus        85 A~p~pga~~fl~~~~~~Gv~IfyVTnR~~~~~e~T~~nL~K~lG~p~~~~~~vll~~~~-~~------------------  145 (209)
T d2b82a1          85 SIPKEVARQLIDMHVRRGDAIFFVTGRSPTKTETVSKTLADNFHIPATNMNPVIFAGDK-PG------------------  145 (209)
T ss_dssp             CEECHHHHHHHHHHHHHTCEEEEEECSCCCSSCCHHHHHHHHTTCCTTTBCCCEECCCC-TT------------------
T ss_pred             cCcchhHHHHHHHHHHcCCeEEEEeCCchhhHHHHHHHHHHHcCCCcccccceEeeCCC-CC------------------
Confidence            357899999999996   78999999874   3445555 44787421 2223 33221 11                  


Q ss_pred             cccccCCCCHHHHHHHHHHhCCCCCcEEEEeCChhcHHHHHHcCCeEEEECCC
Q 027403          126 NQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSS  178 (224)
Q Consensus       126 ~~~~~~KP~~~~~~~al~~~~~~~~~~l~VgDs~~Di~~A~~~G~~~v~v~~~  178 (224)
                            |..   -...++++++    ++++||..+|+.+|.++|+++|.|-+.
T Consensus       146 ------K~~---rr~~Ik~y~I----~l~~GD~l~Df~aA~eagi~~iRi~r~  185 (209)
T d2b82a1         146 ------QNT---KSQWLQDKNI----RIFYGDSDNDITAARDVGARGIRILRA  185 (209)
T ss_dssp             ------CCC---SHHHHHHTTE----EEEEESSHHHHHHHHHTTCEEEECCCC
T ss_pred             ------chH---HHHHHHHcCe----EEEecCCHHHHhHHHHcCCCceEeecc
Confidence                  333   2344466666    799999999999999999999999654

>d1rkqa_ c.108.1.10 (A:) Hypothetical protein YidA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Hypothetical protein YidA
species: Escherichia coli [TaxId: 562]

Probab=97.61  E-value=4.3e-05  Score=61.71  Aligned_cols=68  Identities=19%  Similarity=0.286  Sum_probs=51.9

Q ss_pred             CCHHHHHHHHHHhCCCCCcEEEEeCChhcHHHHHHcCCeEEEECCCCC--CCCCceEeCCHhH--HHHHHHHH
Q 027403          133 PSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP--VPPADHALNSIHN--IKEAIPEI  201 (224)
Q Consensus       133 P~~~~~~~al~~~~~~~~~~l~VgDs~~Di~~A~~~G~~~v~v~~~~~--~~~~d~~i~~~~d--l~~~i~~~  201 (224)
                      -+..+.+.+++.++++++++++|||+.||+...+.+|. ++.+.++.+  ...++++..+-.+  +.+.|.++
T Consensus       197 ~K~~al~~l~~~~~i~~~~ii~~GD~~ND~~ml~~~~~-~~am~na~~~lk~~a~~i~~~~~~~Gv~~~l~~~  268 (271)
T d1rkqa_         197 NKGTGVKSLADVLGIKPEEIMAIGDQENDIAMIEYAGV-GVAVDNAIPSVKEVANFVTKSNLEDGVAFAIEKY  268 (271)
T ss_dssp             SHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSE-EEECTTSCHHHHHHCSEECCCTTTTHHHHHHHHH
T ss_pred             CcccccceehhhcccchhcEEEEeCcHhHHHHHHhCCc-EEEeCCCCHHHHHhCCEEcCCCCcChHHHHHHHH
Confidence            35678899999999999999999999999999999996 467766543  3346777765544  55555543

>d2bdea1 c.108.1.23 (A:2-459) Cytosolic IMP-GMP specific 5'-nucleotidase {Legionella pneumophila [TaxId: 446]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: 5' nucleotidase-like
domain: Cytosolic IMP-GMP specific 5'-nucleotidase
species: Legionella pneumophila [TaxId: 446]

Probab=97.60  E-value=2.8e-05  Score=69.68  Aligned_cols=125  Identities=14%  Similarity=0.082  Sum_probs=77.2

Q ss_pred             CCCCChhHHHHHhcCC---CCeEEEeCCChHHHHHHHHH-c--------CCccccceeEeeccCCCCC-CCCCCCCCccc
Q 027403           54 KLKPDPVLRNLLLSMP---QRKIIFTNADQKHAMEVLGR-L--------GLEDCFEGIICFETINPRL-QPADNTDGIEN  120 (224)
Q Consensus        54 ~~~~~~g~~~~L~~l~---~~~~I~Tn~~~~~~~~~l~~-l--------gl~~~fd~ii~~~~~~~~~-~~~~~~~~~~~  120 (224)
                      .+...|.+..+|.+|+   ++++++|||+...+...+.. +        ...++||.||+...-+..- ..+-.++....
T Consensus       183 Yv~k~~~l~~~L~~lr~~GKklFLiTNS~~~y~~~~m~y~~~~~~~~g~dWr~lFDvVIv~A~KP~FF~~~~~~~~v~~~  262 (458)
T d2bdea1         183 YVIREKEVVEGLKHFIRYGKKIFILTNSEYSYSKLLLDYALSPFLDKGEHWQGLFEFVITLANKPRFFYDNLRFLSVNPE  262 (458)
T ss_dssp             SEECCHHHHHHHHHHHTTTCEEEEECSSCHHHHHHHHHHHHGGGSCTTCCGGGTEEEEEESCCHHHHHHSCCCEEEECTT
T ss_pred             hhcCChhHHHHHHHHHHcCCeEEEEecCcHHHHHHHhhhhcccCCCCCCChHHhceEEEeCCCCCCccCCCCcceEEeCC
Confidence            4566789999999996   57889999999988777765 2        3467999988753211000 00000000000


Q ss_pred             ccCCccccccCCCC---HHHHHHHHHHhCCCCCcEEEEeCCh-hcHHHHH-HcCCeEEEECCC
Q 027403          121 NSFSSNQRILCKPS---LEAIETAIRIANVDPKKTIFFDDSA-RNIASAK-AAGLHTVIVGSS  178 (224)
Q Consensus       121 ~~~~~~~~~~~KP~---~~~~~~al~~~~~~~~~~l~VgDs~-~Di~~A~-~~G~~~v~v~~~  178 (224)
                      .+...+.--.-||.   ..-.....+-+|+..++|+||||+. .||..++ ..||+|+.|-..
T Consensus       263 ~g~l~~~~~~~~~~vY~gGn~~~l~~llg~~g~~VLY~GDhi~~Di~~~kk~~gWrT~~Ii~E  325 (458)
T d2bdea1         263 NGTMTNVHGPIVPGVYQGGNAKKFTEDLGVGGDEILYIGDHIYGDILRLKKDCNWRTALVVEE  325 (458)
T ss_dssp             TCCEEECCSCCCSEEEEECCHHHHHHHTTCCGGGEEEEESSCCSCHHHHHHHHCSEEEEECTT
T ss_pred             CCccccCCccccCCccccCCHHHHHHHhCCCCCcEEEECCccchhhhhhhhhcCCceEEehHH
Confidence            00111100001221   2234667777899889999999998 6987775 579999999654

>d1rlma_ c.108.1.10 (A:) Sugar phosphatase SupH (YbiV) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Sugar phosphatase SupH (YbiV)
species: Escherichia coli [TaxId: 562]

Probab=97.39  E-value=8.8e-05  Score=59.83  Aligned_cols=72  Identities=14%  Similarity=0.202  Sum_probs=59.7

Q ss_pred             CCHHHHHHHHHHhCCCCCcEEEEeCChhcHHHHHHcCCeEEEECCCCC--CCCCceEeCCHhH--HHHHHHHHHhhc
Q 027403          133 PSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP--VPPADHALNSIHN--IKEAIPEIWEGE  205 (224)
Q Consensus       133 P~~~~~~~al~~~~~~~~~~l~VgDs~~Di~~A~~~G~~~v~v~~~~~--~~~~d~~i~~~~d--l~~~i~~~~~~~  205 (224)
                      .+......+++.+|++++++++||||.||+.....+|.. +.+.++.+  ...++++..+-.+  +.+.|..+++.+
T Consensus       190 sK~~al~~l~~~lgi~~~~vi~~GD~~ND~~Ml~~ag~~-vam~Na~~~lk~~A~~v~~~~~~~Gva~~i~~~l~~~  265 (269)
T d1rlma_         190 HKANGISRLLKRWDLSPQNVVAIGDSGNDAEMLKMARYS-FAMGNAAENIKQIARYATDDNNHEGALNVIQAVLDNT  265 (269)
T ss_dssp             SHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHCSEE-EECTTCCHHHHHHCSEECCCGGGTHHHHHHHHHHHTC
T ss_pred             HHHHHHHHHhhhhccccccEEEEcCCcchHHHHHhCCeE-EEeCCCCHHHHHhCCEEcCCCCccHHHHHHHHHHhcC
Confidence            467788999999999999999999999999999999885 66777654  4558888877555  888888888764

>d2bdua1 c.108.1.21 (A:7-297) Cytosolic 5'-nucleotidase III {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Pyrimidine 5'-nucleotidase (UMPH-1)
domain: Cytosolic 5'-nucleotidase III
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.06  E-value=0.00051  Score=57.84  Aligned_cols=121  Identities=12%  Similarity=0.061  Sum_probs=71.5

Q ss_pred             CCCHHHHHHHHhccCCCCCCCCChhHHHHHhcCC---CCeEEEeCCChHHHHHHHHHcCCccccceeEeeccCCCCCCCC
Q 027403           36 EFDNDEFHAFVHGKLPYEKLKPDPVLRNLLLSMP---QRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPA  112 (224)
Q Consensus        36 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~L~~l~---~~~~I~Tn~~~~~~~~~l~~lgl~~~fd~ii~~~~~~~~~~~~  112 (224)
                      +++.+++...+..    ..+.+.||+.+++..|+   .+++|+|++-...+..+++++|+...--.|++..-...     
T Consensus       119 ~l~~~~i~~~v~~----~~i~Lr~G~~e~~~~l~~~~i~~~IvSgG~~~~ie~vl~~lg~~~~ni~I~sN~l~f~-----  189 (291)
T d2bdua1         119 GIPKAKLKEIVAD----SDVMLKEGYENFFGKLQQHGIPVFIFSAGIGDVLEEVIRQAGVYHSNVKVVSNFMDFD-----  189 (291)
T ss_dssp             CCBGGGHHHHHHH----SCCCBCBTHHHHHHHHHHHTCCEEEEEEEEHHHHHHHHHHTTCCBTTEEEEEECEEEC-----
T ss_pred             CCCHHHHHHHHHh----cCCCcccCHHHHHHHHHHcCCeEEEEcCChHHHHHHHHHHcCCCccCceEEeeEEEEe-----
Confidence            4455555555543    45789999999999997   78999999999999999999997521113444221100     


Q ss_pred             CCCCCcccccCCccccccCCCCHHHHHH--HHHHhCCCCCcEEEEeCChhcHHHHHHcC
Q 027403          113 DNTDGIENNSFSSNQRILCKPSLEAIET--AIRIANVDPKKTIFFDDSARNIASAKAAG  169 (224)
Q Consensus       113 ~~~~~~~~~~~~~~~~~~~KP~~~~~~~--al~~~~~~~~~~l~VgDs~~Di~~A~~~G  169 (224)
                         +.+....+. ..++...-+......  ......-+++++++||||.+|+..|..+.
T Consensus       190 ---~~~~~~~~~-~~~i~~~~K~~~~~~~~~~~~~~~~~~~vI~iGDs~~Dl~Ma~g~~  244 (291)
T d2bdua1         190 ---ENGVLKGFK-GELIHVFNKHDGALKNTDYFSQLKDNSNIILLGDSQGDLRMADGVA  244 (291)
T ss_dssp             ---TTSBEEEEC-SSCCCTTCHHHHHHTTHHHHHHTTTCCEEEEEESSSGGGGTTTTCS
T ss_pred             ---CCeeEeecc-CCccccccCcchhhhhHHHHhccCCcCcEEEEeCCHhHHHHHhCCc
Confidence               000000000 001111111122212  12233346789999999999999887543

>d1nrwa_ c.108.1.10 (A:) Hypothetical protein YwpJ {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Hypothetical protein YwpJ
species: Bacillus subtilis [TaxId: 1423]

Probab=96.80  E-value=0.00058  Score=55.04  Aligned_cols=67  Identities=18%  Similarity=0.172  Sum_probs=52.6

Q ss_pred             CCHHHHHHHHHHhCCCCCcEEEEeCChhcHHHHHHcCCeEEEECCCCC--CCCCceEeCCHh--HHHHHHHH
Q 027403          133 PSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP--VPPADHALNSIH--NIKEAIPE  200 (224)
Q Consensus       133 P~~~~~~~al~~~~~~~~~~l~VgDs~~Di~~A~~~G~~~v~v~~~~~--~~~~d~~i~~~~--dl~~~i~~  200 (224)
                      -+....+.+++.+|++++++++|||+.||+.....+|. ++.+.++.+  ...++++..+-.  -+.++|.+
T Consensus       213 ~K~~ai~~l~~~~gi~~~~vi~~GD~~ND~~Ml~~a~~-svam~na~~~~k~~A~~v~~~~~~~Gv~~~l~~  283 (285)
T d1nrwa_         213 SKGQALKRLAKQLNIPLEETAAVGDSLNDKSMLEAAGK-GVAMGNAREDIKSIADAVTLTNDEHGVAHMMKH  283 (285)
T ss_dssp             SHHHHHHHHHHHTTCCGGGEEEEESSGGGHHHHHHSSE-EEECTTCCHHHHHHCSEECCCGGGTHHHHHHHH
T ss_pred             hhhhHHHHHHhhcccCcccEEEEeCCHHHHHHHHhCCe-EEEeCCCCHHHHHhCCEEcCCCCccHHHHHHHH
Confidence            56888899999999999999999999999999999996 478877654  344788876533  24444444

>d1q92a_ c.108.1.8 (A:) 5'(3')-deoxyribonucleotidase (dNT-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: 5'(3')-deoxyribonucleotidase (dNT-2)
domain: 5'(3')-deoxyribonucleotidase (dNT-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.78  E-value=0.0012  Score=51.16  Aligned_cols=106  Identities=18%  Similarity=0.180  Sum_probs=69.4

Q ss_pred             CCCCCCChhHHHHHhcCC----CCeEEEeCCChH------HHHHHHHHcCCccccceeEeeccCCCCCCCCCCCCCcccc
Q 027403           52 YEKLKPDPVLRNLLLSMP----QRKIIFTNADQK------HAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENN  121 (224)
Q Consensus        52 ~~~~~~~~g~~~~L~~l~----~~~~I~Tn~~~~------~~~~~l~~lgl~~~fd~ii~~~~~~~~~~~~~~~~~~~~~  121 (224)
                      +..++|+||+.++|+.|.    ..+.++|..+..      .-...|++.......+.++.+.+                 
T Consensus        70 f~~L~p~~gA~e~l~~L~~~~~~~v~i~t~~~~~~~~~~~~k~~Wl~~~~~~~~~~~~~~t~~-----------------  132 (195)
T d1q92a_          70 FFELEPLPGAVEAVKEMASLQNTDVFICTSPIKMFKYCPYEKYAWVEKYFGPDFLEQIVLTRD-----------------  132 (195)
T ss_dssp             TTTCCBCTTHHHHHHHHHHSTTEEEEEEECCCSCCSSHHHHHHHHHHHHHCGGGGGGEEECSC-----------------
T ss_pred             HhhCCcccCHHHHHHHHhhccCccceEEccccccCcchHHHHHHHHHHhcCCCCccEEEEccc-----------------
Confidence            467899999999999985    235688886532      22234554422223334443322                 


Q ss_pred             cCCccccccCCCCHHHHHHHHHHhCCCCCcEEEEeCChhcHHHHHHcCCeEEEECCCCCCC----CCceEeCCHhHHHHH
Q 027403          122 SFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVPVP----PADHALNSIHNIKEA  197 (224)
Q Consensus       122 ~~~~~~~~~~KP~~~~~~~al~~~~~~~~~~l~VgDs~~Di~~A~~~G~~~v~v~~~~~~~----~~d~~i~~~~dl~~~  197 (224)
                                |-            .+..+  ++|+|++.++..+.++|+.++.+.++..+.    ..-+.+.|..|+.+.
T Consensus       133 ----------K~------------~~~~d--~lIDD~p~n~~~~~~~g~~~il~~~~~N~~~~~~~~~~Rv~~W~e~~~~  188 (195)
T d1q92a_         133 ----------KT------------VVSAD--LLIDDRPDITGAEPTPSWEHVLFTACHNQHLQLQPPRRRLHSWADDWKA  188 (195)
T ss_dssp             ----------ST------------TSCCS--EEEESCSCCCCSCSSCSSEEEEECCTTTTTCCCCTTCEEECCTTSCHHH
T ss_pred             ----------cc------------eecCe--EEecCcHHHHHHHhcCCCeEEEECCCcccCCCCCCCceeeCCHHHHHHH
Confidence                      31            11122  899999999999999999999998876532    234689999987644


Q ss_pred             H
Q 027403          198 I  198 (224)
Q Consensus       198 i  198 (224)
                      |
T Consensus       189 i  189 (195)
T d1q92a_         189 I  189 (195)
T ss_dssp             H
T ss_pred             H
Confidence            4

>d2b30a1 c.108.1.10 (A:18-300) PFL1270w orthologue {Plasmodium vivax [TaxId: 5855]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: PFL1270w orthologue
species: Plasmodium vivax [TaxId: 5855]

Probab=96.72  E-value=0.00076  Score=53.97  Aligned_cols=73  Identities=12%  Similarity=0.187  Sum_probs=57.2

Q ss_pred             CCCCHHHHHHHHHHhCCCCCcEEEEeCChhcHHHHHHcCCeEEEECCCCC--CCCCceEeCCHh--H-HHHHHHHHHhh
Q 027403          131 CKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP--VPPADHALNSIH--N-IKEAIPEIWEG  204 (224)
Q Consensus       131 ~KP~~~~~~~al~~~~~~~~~~l~VgDs~~Di~~A~~~G~~~v~v~~~~~--~~~~d~~i~~~~--d-l~~~i~~~~~~  204 (224)
                      +.-+......+++.++++++++++|||+.||+.....+|. .+.+.++.+  ...++++..+-.  + +..++..+|+.
T Consensus       205 ~~~K~~~l~~l~~~~~i~~~~vi~~GD~~ND~~Ml~~a~~-~va~~na~~~~k~~a~~v~~~~~~~g~v~~~l~~~~~~  282 (283)
T d2b30a1         205 GHDKYTGINYLLKHYNISNDQVLVVGDAENDIAMLSNFKY-SFAVANATDSAKSHAKCVLPVSHREGAVAYLLKKVFDL  282 (283)
T ss_dssp             TCCHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHSCSE-EEECTTCCHHHHHHSSEECSSCTTTTHHHHHHHHHHTT
T ss_pred             cchhHHHHHHHhhhcccccceEEEecCChhhHHHHHhCCc-EEEeCCCCHHHHHhCCEEECCcCCCcHHHHHHHHHHcC
Confidence            3567888999999999999999999999999999999996 467776654  344788875432  2 77777777753

>d1wpga2 c.108.1.7 (A:344-360,A:600-750) Calcium ATPase, catalytic domain P {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Meta-cation ATPase, catalytic domain P
domain: Calcium ATPase, catalytic domain P
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=96.64  E-value=0.0037  Score=48.04  Aligned_cols=134  Identities=14%  Similarity=0.156  Sum_probs=78.3

Q ss_pred             CCChhHHHHHhcCC---CCeEEEeCCChHHHHHHHHHcCCcccc----ceeEeeccCCCCCCCCCCCCCcccccCCcccc
Q 027403           56 KPDPVLRNLLLSMP---QRKIIFTNADQKHAMEVLGRLGLEDCF----EGIICFETINPRLQPADNTDGIENNSFSSNQR  128 (224)
Q Consensus        56 ~~~~g~~~~L~~l~---~~~~I~Tn~~~~~~~~~l~~lgl~~~f----d~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~  128 (224)
                      +|.+++++.++.|+   .++.++|+-+..-+..+-+.+|+...-    +..++..+....       +..+-........
T Consensus        20 p~R~~~~~~I~~l~~~GI~v~miTGD~~~tA~~ia~~~Gi~~~~~~v~~~~~~~~~~~~~-------~~~~~~~~~~~~~   92 (168)
T d1wpga2          20 PPRKEVMGSIQLCRDAGIRVIMITGDNKGTAIAICRRIGIFGENEEVADRAYTGREFDDL-------PLAEQREACRRAC   92 (168)
T ss_dssp             CBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTSSCTTCCCTTTEEEHHHHHHS-------CHHHHHHHHHHCC
T ss_pred             CCchhHHHHHHHHHHCcCEEEEECCCCHHHHHHHHHHcCCCCCccccccccccccccchh-------hHHHHhhhhhhhh
Confidence            45678877777775   889999999999999999999984321    112222111100       0000000000000


Q ss_pred             ccCCCCH---HHHHHHHHHhCCCCCcEEEEeCChhcHHHHHHcCCeEEEECCCCC--CCCCceEeCC--HhHHHHHHHH
Q 027403          129 ILCKPSL---EAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP--VPPADHALNS--IHNIKEAIPE  200 (224)
Q Consensus       129 ~~~KP~~---~~~~~al~~~~~~~~~~l~VgDs~~Di~~A~~~G~~~v~v~~~~~--~~~~d~~i~~--~~dl~~~i~~  200 (224)
                      ..+.-.|   ..+-..+++.|   ..+.|+||+.||..+-+.+.+- +.+..+..  ..-+|+++.+  |..+.++|.+
T Consensus        93 v~ar~~p~~K~~lv~~l~~~g---~~Va~vGDG~nD~~AL~~AdvG-Ia~~~gt~~a~~aAdivl~~~~l~~v~~~I~~  167 (168)
T d1wpga2          93 CFARVEPSHKSKIVEYLQSYD---EITAMTGDGVNDAPALKKAEIG-IAMGSGTAVAKTASEMVLADDNFSTIVAAVEE  167 (168)
T ss_dssp             EEESCCHHHHHHHHHHHHHTT---CCEEEEECSGGGHHHHHHSSEE-EEETTSCHHHHHTCSEEETTCCTHHHHHHHHH
T ss_pred             hhhccchhHHHHHHHHHHhcc---cceeEEecCCCCHHHHHhCCEE-EEeccccHHHHHhCCEEEccCCHHHHHHHHHc
Confidence            0011222   33333444444   6799999999999999999864 66665543  3347887655  7777777653

>d1u02a_ c.108.1.15 (A:) Trehalose-6-phosphate phosphatase related protein {Archaeon Thermoplasma acidophilum [TaxId: 2303]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Trehalose-phosphatase
domain: Trehalose-6-phosphate phosphatase related protein
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

Probab=96.55  E-value=0.0021  Score=49.32  Aligned_cols=52  Identities=13%  Similarity=0.125  Sum_probs=40.9

Q ss_pred             CCcEEEEeCChhcHHHHHHcCCeEEEECCCCCCCCCceEeCCHhHHHHHHHHH
Q 027403          149 PKKTIFFDDSARNIASAKAAGLHTVIVGSSVPVPPADHALNSIHNIKEAIPEI  201 (224)
Q Consensus       149 ~~~~l~VgDs~~Di~~A~~~G~~~v~v~~~~~~~~~d~~i~~~~dl~~~i~~~  201 (224)
                      .+++++||||.||+..-..+|. .+.|..|.....++|++++..|+.++++.+
T Consensus       170 ~~~~i~~GDs~ND~~Mf~~~~~-~~av~~g~~~~~A~~~~~~~~ev~~~l~~l  221 (229)
T d1u02a_         170 ERPAIIAGDDATDEAAFEANDD-ALTIKVGEGETHAKFHVADYIEMRKILKFI  221 (229)
T ss_dssp             TSCEEEEESSHHHHHHHHTTTT-SEEEEESSSCCCCSEEESSHHHHHHHHHHH
T ss_pred             cccceeecCCCChHHHHhccCC-eEEEEeCCCCccCeEEcCCHHHHHHHHHHH
Confidence            4789999999999999988865 334444444678999999999988877654

>d1nf2a_ c.108.1.10 (A:) Hypothetical protein TM0651 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Hypothetical protein TM0651
species: Thermotoga maritima [TaxId: 2336]

Probab=96.40  E-value=0.00059  Score=55.05  Aligned_cols=69  Identities=14%  Similarity=0.188  Sum_probs=54.7

Q ss_pred             CCCHHHHHHHHHHhCCCCCcEEEEeCChhcHHHHHHcCCeEEEECCCCC--CCCCceEeCCHhH--HHHHHHHH
Q 027403          132 KPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP--VPPADHALNSIHN--IKEAIPEI  201 (224)
Q Consensus       132 KP~~~~~~~al~~~~~~~~~~l~VgDs~~Di~~A~~~G~~~v~v~~~~~--~~~~d~~i~~~~d--l~~~i~~~  201 (224)
                      -.+....+.+++.++++++++++|||+.||+.....+|. .+.+.++.+  ...+++++.+-.+  +.++|.++
T Consensus       189 ~~K~~ai~~l~~~~~i~~~~vva~GD~~ND~~ml~~~~~-sva~~na~~~~k~~A~~i~~~~~~~Gva~~i~~l  261 (267)
T d1nf2a_         189 VDKGKALRFLRERMNWKKEEIVVFGDNENDLFMFEEAGL-RVAMENAIEKVKEASDIVTLTNNDSGVSYVLERI  261 (267)
T ss_dssp             CCHHHHHHHHHHHHTCCGGGEEEEECSHHHHHHHTTCSE-EEECTTSCHHHHHHCSEECCCTTTTHHHHHHTTB
T ss_pred             CchhHHHHHHHHhhccCcccEEEEcCCcchHHHHHhCCc-EEEeCCCCHHHHHhCCEEcCCCCccHHHHHHHHH
Confidence            457888999999999999999999999999999999997 477777654  4457888876655  55555443

>d1wzca1 c.108.1.10 (A:1-243) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP)
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=96.40  E-value=0.0042  Score=48.19  Aligned_cols=65  Identities=17%  Similarity=0.162  Sum_probs=52.3

Q ss_pred             CCCHHHHHHHHHHhC-CCCCcEEEEeCChhcHHHHHHcCCeEEEECCCCCCCCCceEeCCHhHHHHHHH
Q 027403          132 KPSLEAIETAIRIAN-VDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVPVPPADHALNSIHNIKEAIP  199 (224)
Q Consensus       132 KP~~~~~~~al~~~~-~~~~~~l~VgDs~~Di~~A~~~G~~~v~v~~~~~~~~~d~~i~~~~dl~~~i~  199 (224)
                      -.+.......++.++ ..+++++.|||+.||+..-..+|. .+.+.++.  ....-.+.++.|+.++|+
T Consensus       178 ~~K~~al~~l~~~~~~~~~~~~~a~GD~~ND~~Ml~~a~~-~va~~Na~--~~~~~~~~~i~~~~~~i~  243 (243)
T d1wzca1         178 SDKGKAAKILLDFYKRLGQIESYAVGDSYNDFPMFEVVDK-VFIVGSLK--HKKAQNVSSIIDVLEVIK  243 (243)
T ss_dssp             CCHHHHHHHHHHHHHTTSCEEEEEEECSGGGHHHHTTSSE-EEEESSCC--CTTCEEESCHHHHHHHHT
T ss_pred             hccHHHHHHHHHHhcCCCcccEEEEcCCHhHHHHHHcCCc-EEEeCCCC--hHHHhhhhHHHHHHHhhC
Confidence            446777788888884 788999999999999999999995 57777764  445667889999888763

>d2rbka1 c.108.1.10 (A:2-261) Sugar-phosphate phosphatase BT4131 {Bacteroides thetaiotaomicron [TaxId: 818]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Sugar-phosphate phosphatase BT4131
species: Bacteroides thetaiotaomicron [TaxId: 818]

Probab=96.33  E-value=0.0014  Score=52.40  Aligned_cols=60  Identities=22%  Similarity=0.312  Sum_probs=49.4

Q ss_pred             CCCCHHHHHHHHHHhCCCCCcEEEEeCChhcHHHHHHcCCeEEEECCCCC--CCCCceEeCCH
Q 027403          131 CKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP--VPPADHALNSI  191 (224)
Q Consensus       131 ~KP~~~~~~~al~~~~~~~~~~l~VgDs~~Di~~A~~~G~~~v~v~~~~~--~~~~d~~i~~~  191 (224)
                      +-.+....+.+++.+|++++++++||||.||+.....+|. ++.+.++.+  ...++++..+-
T Consensus       184 ~~sK~~al~~l~~~~~i~~~~~~a~GD~~ND~~Ml~~a~~-svav~na~~~lk~~A~~vt~~~  245 (260)
T d2rbka1         184 GDTKQKGIDEIIRHFGIKLEETMSFGDGGNDISMLRHAAI-GVAMGQAKEDVKAAADYVTAPI  245 (260)
T ss_dssp             TCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSE-EEECTTSCHHHHHHSSEECCCG
T ss_pred             CCCHHHHHHHHHHhccccHhheeEecCCcccHHHHHhCCe-EEEeCCCCHHHHHhCCEEeCCC
Confidence            4567888999999999999999999999999999999999 578877654  34467776653

>d1ta0a_ c.108.1.16 (A:) Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1, NRAMP1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: NLI interacting factor-like phosphatase
domain: Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1, NRAMP1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.14  E-value=0.0023  Score=49.66  Aligned_cols=83  Identities=17%  Similarity=0.163  Sum_probs=61.0

Q ss_pred             CCCChhHHHHHhcCC--CCeEEEeCCChHHHHHHHHHcCCccccceeEeeccCCCCCCCCCCCCCcccccCCccccccCC
Q 027403           55 LKPDPVLRNLLLSMP--QRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCK  132 (224)
Q Consensus        55 ~~~~~g~~~~L~~l~--~~~~I~Tn~~~~~~~~~l~~lgl~~~fd~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~K  132 (224)
                      +..-||+.++|+.+.  +.++|.|.+.+.++..+++.+.....|......++....                       +
T Consensus        54 v~~RP~l~eFL~~l~~~yei~I~Ta~~~~YA~~il~~ldp~~~~~~~~~r~~c~~~-----------------------~  110 (181)
T d1ta0a_          54 VLKRPHVDEFLQRMGELFECVLFTASLAKYADPVADLLDKWGAFRARLFRESCVFH-----------------------R  110 (181)
T ss_dssp             EEECTTHHHHHHHHHHHSEEEEECSSCHHHHHHHHHHHCSSCCEEEEECGGGSEEE-----------------------T
T ss_pred             EecCCCHHHHHHHHHhceEEEEEcCCcHHHHHHHHHHhccCCceeEEEEeeeeeec-----------------------C
Confidence            346799999999997  899999999999999999999877777666554433211                       0


Q ss_pred             CCHHHHHHHHHHhCCCCCcEEEEeCChhcHH
Q 027403          133 PSLEAIETAIRIANVDPKKTIFFDDSARNIA  163 (224)
Q Consensus       133 P~~~~~~~al~~~~~~~~~~l~VgDs~~Di~  163 (224)
                      +   .+..-++.+|.+.+++++|+|++.-..
T Consensus       111 ~---~~~KdL~~l~~~l~~vvivDd~~~~~~  138 (181)
T d1ta0a_         111 G---NYVKDLSRLGRDLRRVLILDNSPASYV  138 (181)
T ss_dssp             T---EEECCGGGSCSCGGGEEEECSCGGGGT
T ss_pred             C---cccccHhhcCCCHHHeEEEcCChhhhh
Confidence            0   011224556778899999999986543

>d1s2oa1 c.108.1.10 (A:1-244) Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc 6803 [TaxId: 1148]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Sucrose-phosphatase Slr0953
species: Synechocystis sp. pcc 6803 [TaxId: 1148]

Probab=95.03  E-value=0.018  Score=45.04  Aligned_cols=48  Identities=19%  Similarity=0.200  Sum_probs=41.1

Q ss_pred             CCCCHHHHHHHHHHhCCCCCcEEEEeCChhcHHHHHHcCCeEEEECCCC
Q 027403          131 CKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSV  179 (224)
Q Consensus       131 ~KP~~~~~~~al~~~~~~~~~~l~VgDs~~Di~~A~~~G~~~v~v~~~~  179 (224)
                      +--+..+...+++.+|+++++++++||+.||+..-..+|. .+.+.++.
T Consensus       160 ~~~K~~a~~~l~~~~gi~~~~~v~~GD~~ND~~Ml~~~~~-~vav~na~  207 (244)
T d1s2oa1         160 RSNKGNATQYLQQHLAMEPSQTLVCGDSGNDIGLFETSAR-GVIVRNAQ  207 (244)
T ss_dssp             TCSHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHTSSSE-EEECTTCC
T ss_pred             ccchhHHHHHHHHhccCChhhEEEEcCCCCCHHHHhhCCc-EEEeCCCC
Confidence            3456788999999999999999999999999999988885 57776654

>d1xvia_ c.108.1.10 (A:) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP)
species: Escherichia coli [TaxId: 562]

Probab=94.67  E-value=0.018  Score=43.85  Aligned_cols=45  Identities=16%  Similarity=0.082  Sum_probs=34.8

Q ss_pred             CCCHHHHHHHH---HHhCCCCCcEEEEeCChhcHHHHHHcCCeEEEECC
Q 027403          132 KPSLEAIETAI---RIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGS  177 (224)
Q Consensus       132 KP~~~~~~~al---~~~~~~~~~~l~VgDs~~Di~~A~~~G~~~v~v~~  177 (224)
                      -.+......++   +++|++++++++|||+.||+.....+|. .|.|.+
T Consensus       183 ~~K~~~~~~l~~~~~~l~i~~~~~iafGD~~NDl~Ml~~a~~-~vaV~n  230 (232)
T d1xvia_         183 AGKDQAANWIIATYQQLSGKRPTTLGLGDGPNDAPLLEVMDY-AVIVKG  230 (232)
T ss_dssp             CCHHHHHHHHHHHHHHHHSSCCEEEEEESSGGGHHHHHTSSE-EEECCC
T ss_pred             chHHHHHHHHHHHHHHcCCChhcEEEEcCCHhHHHHHHhCCe-EEEEeC
Confidence            34455555544   4578999999999999999999999997 566654

>d2amya1 c.108.1.10 (A:4-246) Phosphomannomutase 2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Phosphomannomutase 2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=85.43  E-value=0.36  Score=36.19  Aligned_cols=44  Identities=11%  Similarity=0.141  Sum_probs=31.3

Q ss_pred             CCCCCcEEEEeC----ChhcHHHHHHcCCeEEEECCCCCCCCCceEeCCHhHHHHHHHHHH
Q 027403          146 NVDPKKTIFFDD----SARNIASAKAAGLHTVIVGSSVPVPPADHALNSIHNIKEAIPEIW  202 (224)
Q Consensus       146 ~~~~~~~l~VgD----s~~Di~~A~~~G~~~v~v~~~~~~~~~d~~i~~~~dl~~~i~~~~  202 (224)
                      +.++++++.|||    |.||+..-.++|...+             .+++..|..+++..++
T Consensus       195 ~~~~~ev~afGD~~~~g~NDi~Ml~~~g~~~~-------------~v~~~~~~~~~~~~l~  242 (243)
T d2amya1         195 NDGYKTIYFFGDKTMPGGNDHEIFTDPRTMGY-------------SVTAPEDTRRICELLF  242 (243)
T ss_dssp             TSCCSEEEEEECSCC---CCCHHHHCTTEEEE-------------ECSSHHHHHHHHHHHC
T ss_pred             CCCcceEEEEcCCCCCCCCcHHHHHccCCcEE-------------EeCCHHHHHHHHHHHh
Confidence            467899999999    6799999999996544             3445666666665553

>d1y8aa1 c.108.1.24 (A:1-308) Hypothetical protein AF1437 {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: AF1437-like
domain: Hypothetical protein AF1437
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=85.35  E-value=0.29  Score=39.92  Aligned_cols=148  Identities=13%  Similarity=0.133  Sum_probs=84.0

Q ss_pred             CCCHHHHHHHHhccCCCCCCCCChhHHHHHhcCC--CCeEEEeCCChHHHHHHHHHcCCccccceeEeecc-CCCCCCCC
Q 027403           36 EFDNDEFHAFVHGKLPYEKLKPDPVLRNLLLSMP--QRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFET-INPRLQPA  112 (224)
Q Consensus        36 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~L~~l~--~~~~I~Tn~~~~~~~~~l~~lgl~~~fd~ii~~~~-~~~~~~~~  112 (224)
                      +++.+++.+.-.     ..+...||+.++|+.+.  .+-+|+|-+-..+++.+.+++|+.  +. +.+.+- ......|.
T Consensus        66 Gvt~edL~~fSE-----~~~~lvpgA~~~lk~l~~~m~~yIvSTSY~qyi~al~~~~gfp--~e-~~~T~~~lD~~~~p~  137 (308)
T d1y8aa1          66 GVKNRDVERIAE-----LSAKFVPDAEKAMATLQERWTPVVISTSYTQYLRRTASMIGVR--GE-LHGTEVDFDSIAVPE  137 (308)
T ss_dssp             TCCHHHHHHHHH-----HHCCBCTTHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCC--SE-EEEEBCCGGGCCCCH
T ss_pred             CCCHHHHHHHhh-----hceeecCCHHHHHHHHHhhCCcEEEeccHHHHHHHHHhhcCCC--ce-eecccccccccCCCh
Confidence            345555555433     24788999999999998  678899999999999999999984  33 332221 11010111


Q ss_pred             -------CCCCCc-------------------ccccCCccccccC-CCCHHHHHHHHHHhCCCCCcEEEEeCChhcHHH-
Q 027403          113 -------DNTDGI-------------------ENNSFSSNQRILC-KPSLEAIETAIRIANVDPKKTIFFDDSARNIAS-  164 (224)
Q Consensus       113 -------~~~~~~-------------------~~~~~~~~~~~~~-KP~~~~~~~al~~~~~~~~~~l~VgDs~~Di~~-  164 (224)
                             .+.+.+                   +-.+++.....-| --+..+....++..++++.  ++||||..|+.. 
T Consensus       138 ee~e~ll~i~~~~~d~~~eel~e~~d~~f~~~e~~~i~e~Vk~VGgg~k~~i~~~~~~~~~~~~~--~~VGDSITDve~L  215 (308)
T d1y8aa1         138 GLREELLSIIDVIASLSGEELFRKLDELFSRSEVRKIVESVKAVGAGEKAKIMRGYCESKGIDFP--VVVGDSISDYKMF  215 (308)
T ss_dssp             HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHSHHHHHHHHTCBCCCHHHHHHHHHHHHHHHTCSSC--EEEECSGGGHHHH
T ss_pred             HHHHHHHHHhhhccCccHHHHHHHHHHHhccchHhhHHhhhcccCCchhHHHHHhhcccccCCcc--eeccCccccHHHH
Confidence                   000111                   1111222211112 2234555666777787664  999999998765 


Q ss_pred             --HHHc-CCeEEEECCCCCCCCCceEeCCHhH
Q 027403          165 --AKAA-GLHTVIVGSSVPVPPADHALNSIHN  193 (224)
Q Consensus       165 --A~~~-G~~~v~v~~~~~~~~~d~~i~~~~d  193 (224)
                        |+.. |+...+-++.+....++..+-|...
T Consensus       216 r~~r~~gGlaIsFNGN~Yal~eA~VaiiS~~~  247 (308)
T d1y8aa1         216 EAARGLGGVAIAFNGNEYALKHADVVIISPTA  247 (308)
T ss_dssp             HHHHHTTCEEEEESCCHHHHTTCSEEEECSST
T ss_pred             HHHhcCCCeeEEecCccccccccceEEeccch
Confidence              5554 4443333343335556665544433