Citrus Sinensis ID: 027482

---

Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220---
Protein Sequence
MSTSAYISHICPLASFACTLRSKALSFQLRVSTHSPLHSSLRCRRPPPMSSDYAGTNFPANKLEPIQLNDESDFYQITSPDGFISISGFGSLLSENSARSTFPNLINFRVAKLRGFRRVFAHVAPIFFERGIAKPETKEISSLSVEPCEGETLIVTVFEIKKSEIPAFIKREHEFRFLAVLPETLDGKPFTNRAVLCARSSDEEFFQIRCKGNYLRRSCCRRV
Secondary Structure (PSIPRED)
ccccccccccccccHHHHccccccEEEEEEcccccccccccccccccccccccccccccccccccccccccccccccccccccEEEEEEcccccccccccccccccccEEEEEcccEEEcccccHHHHHccccccccccccccEEccccccEEEEEEEEEccccHHHHHHHccEEEEEEEEccccccccccccEEEEEccccHHHHHHHcccccEEccccccc
Secondary Structure Prediction (SSPRO)
ccccEHEHcccccHHHHHHHcccccEEcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHcccccEEEEEccccccHHHHHHHcccccccEEEEEcccEEEccccHHHHHHccccccccHHHHccccccccccEEEEEEEEccHHHHHHHHHHHHHEEEEEEcccccccccccccEEEEEEccHHHHHHHHcccccEEccccccc
Coil and Loop (DISEMBL)
mstsayishicplasFACTLRSKALSFQLrvsthsplhsslrcrrpppmssdyagtnfpanklepiqlndesdfyqitspdgfisisgfgsllsensarstfpnLINFRVAKLRGFRRVFAHVApiffergiakpetkeisslsvepcegeTLIVTVFEIKKSEIPAFIKREHEFRFLAvlpetldgkpftnravlcarssdeeffQIRCkgnylrrsccrrv
Flexible Loop (DISEMBL)
MSTSAYISHICPLASFACTLRSKALSFQLRVsthsplhsslrcrrpPPMSSDYAGTNFPANKLEPIQLNDESDFYQITSPDGFISISGFGSLLSENSARSTFPNLINFRVAKLRGFRRVFAHVAPIffergiakpetkeisslsvepcegeTLIVTVFEIKKSEIPAFIKREHEFRFLAVlpetldgkpftNRAVLCarssdeeffqirckgnylrrsccrrv
Low Complexity Region (SEG)
MSTSAYISHICPLASFACTLRSKALSFQLRVSTHSPLHSSLRCRRPPPMSSDYAGTNFPANKLEPIQLNDESDFYQITSPDGFISISGFGSLLSENSARSTFPNLINFRVAKLRGFRRVFAHVAPIFFERGIAKPETKEISSLSVEPCEGETLIVTVFEIKKSEIPAFIKREHEFRFLAVLPETLDGKPFTNRAVLCARSSDEEFFQIRCKGNYLRRSCCRRV
Disordered region (IsUnstruct)
****AYISHICPLASFACTLRSKALSFQLRV****************************************SDFYQITSPDGFISISGFGSLLSENSARSTFPNLINFRVAKLRGFRRVFAHVAPIFFERGIAKPETKEISSLSVEPCEGETLIVTVFEIKKSEIPAFIKREHEFRFLAVLPETLDGKPFTNRAVLCARSSDEEFFQIRCKGNYLRRSCC***
Disordered Region (DISOPRED)
***********PL***************************************************PIQLNDESDFYQITSPDGFISISGFGSLLSENSARSTFPNLINFRVAKLRGFRRVFAHVAPIFFERGIAKPETKEIS***VEPCEGETLIVTVFEIKKSEIPAFIKREHEFRFLAVLPETLDGKPFTNRAVLCARSSDEEFFQIRCKGNYLRRSCCRR*
Disordered Region (DISEMBL)
MSTSAYISHICPLASFACTLRSKALSFQLR*************RRPPPMSSDYAGTNFPANKLEPIQLNDESDFYQITSPDGFISISGFGSLLSENSARSTFPNLINFRVAKLRGFRRVFAHVAPIFFERGIAKPETKEISSLSVEPCEGETLIVTVFEIKKSEIPAFIKREHEFRFLAVLPETLDGKPFTNRAVLCARSSDEEFFQIRCKGNYLRRSCCRRV
Disordered Region (DISPRO)
****AYISHICPLASFACTLRSKALSFQLRVST********************************IQLNDESDFYQITSPDGFISISGFGSLLSENSARSTFPNLINFRVAKLRGFRRVFAHVAPIFFERGIAKPETKEISSLSVEPCEGETLIVTVFEIKKSEIPAFIKREHEFRFLAVLPETLDGKPFTNRAVLCARSSDEEFFQIRCKGNYLRRSCCR**
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
oooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
SSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MSTSAYISHICPLASFACTLRSKALSFQLRVSTHSPLHSSLRCRRPPPMSSDYAGTNFPANKLEPIQLNDESDFYQITSPDGFISISGFGSLLSENSARSTFPNLINFRVAKLRGFRRVFAHVAPIFFERGIAKPETKEISSLSVEPCEGETLIVTVFEIKKSEIPAFIKREHEFRFLAVLPETLDGKPFTNRAVLCARSSDEEFFQIRCKGNYLRRSCCRRV
Positional Conservation
no confident homologs detected

---

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	223
145340274	289	uncharacterized protein [Arabidopsis tha	0.663	0.512	0.804	9e-62
225431812	248	PREDICTED: uncharacterized protein LOC10	0.663	0.596	0.801	1e-61
297804606	297	hypothetical protein ARALYDRAFT_493280 [	0.663	0.498	0.790	4e-61
363806706	283	uncharacterized protein LOC100781602 [Gl	0.820	0.646	0.645	3e-60
225431810	308	PREDICTED: uncharacterized protein LOC10	0.811	0.587	0.663	5e-60
449464742	306	PREDICTED: uncharacterized protein LOC10	0.798	0.581	0.675	3e-59
449501489	304	PREDICTED: uncharacterized LOC101211371	0.798	0.585	0.672	2e-58
449464740	244	PREDICTED: uncharacterized protein LOC10	0.708	0.647	0.727	3e-57
294462572	187	unknown [Picea sitchensis]	0.690	0.823	0.720	6e-57
224110318	245	predicted protein [Populus trichocarpa]	0.672	0.612	0.769	8e-57

>gi|145340274|ref|NP_193341.3| uncharacterized protein [Arabidopsis thaliana] gi|332658287|gb|AEE83687.1| uncharacterized protein [Arabidopsis thaliana]

 Score =  242 bits (617), Expect = 9e-62,   Method: Compositional matrix adjust.
 Identities = 119/148 (80%), Positives = 132/148 (89%)

Query: 66  IQLNDESDFYQITSPDGFISISGFGSLLSENSARSTFPNLINFRVAKLRGFRRVFAHVAP 125
           ++L DESDF ++ S D  ISI+GFGSLLSE SARSTFP+L NFR+AKL+GFRRVFAH AP
Sbjct: 57  MELEDESDFEKLLSSDNRISITGFGSLLSERSARSTFPDLENFRIAKLQGFRRVFAHSAP 116

Query: 126 IFFERGIAKPETKEISSLSVEPCEGETLIVTVFEIKKSEIPAFIKREHEFRFLAVLPETL 185
           IFFERGIA PETKEISSLSVEPCEGE+L+VTVFEIK SEIPAFI RE EFRFLAV+PETL
Sbjct: 117 IFFERGIANPETKEISSLSVEPCEGESLVVTVFEIKSSEIPAFIGRELEFRFLAVVPETL 176

Query: 186 DGKPFTNRAVLCARSSDEEFFQIRCKGN 213
           +GKP+TN AVLC R SDEEFFQIRCKGN
Sbjct: 177 EGKPYTNSAVLCGRYSDEEFFQIRCKGN 204

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225431812|ref|XP_002273099.1| PREDICTED: uncharacterized protein LOC100251759 [Vitis vinifera] gi|296083318|emb|CBI22954.3| unnamed protein product [Vitis vinifera]

 Score =  241 bits (616), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 121/151 (80%), Positives = 133/151 (88%), Gaps = 3/151 (1%)

Query: 66  IQLNDESDFYQITSPDG---FISISGFGSLLSENSARSTFPNLINFRVAKLRGFRRVFAH 122
           I+L DESDF ++ SPDG    +S+ GFGSLLSE SARSTFP+L+NFRVA+L  FRRVFAH
Sbjct: 13  IELKDESDFEKVLSPDGGLGLLSVCGFGSLLSERSARSTFPDLMNFRVARLNSFRRVFAH 72

Query: 123 VAPIFFERGIAKPETKEISSLSVEPCEGETLIVTVFEIKKSEIPAFIKREHEFRFLAVLP 182
           VAPIFFERGIAKPET EISSLSVEPCEGETLIVTVFEI++SEIP+FIKREHEFRFLAV P
Sbjct: 73  VAPIFFERGIAKPETMEISSLSVEPCEGETLIVTVFEIQRSEIPSFIKREHEFRFLAVFP 132

Query: 183 ETLDGKPFTNRAVLCARSSDEEFFQIRCKGN 213
           ETLDGK FT  AVLCAR SDEEFFQ RCKG+
Sbjct: 133 ETLDGKLFTTPAVLCARYSDEEFFQNRCKGS 163

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297804606|ref|XP_002870187.1| hypothetical protein ARALYDRAFT_493280 [Arabidopsis lyrata subsp. lyrata] gi|297316023|gb|EFH46446.1| hypothetical protein ARALYDRAFT_493280 [Arabidopsis lyrata subsp. lyrata]

 Score =  239 bits (611), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 117/148 (79%), Positives = 132/148 (89%)

Query: 66  IQLNDESDFYQITSPDGFISISGFGSLLSENSARSTFPNLINFRVAKLRGFRRVFAHVAP 125
           ++L DESDF ++ S D  ISI+GFGSLLSE SARSTFP+L NFR+AKL+GFRRVFAH AP
Sbjct: 65  LELEDESDFEKLLSSDNRISIAGFGSLLSERSARSTFPDLENFRIAKLQGFRRVFAHSAP 124

Query: 126 IFFERGIAKPETKEISSLSVEPCEGETLIVTVFEIKKSEIPAFIKREHEFRFLAVLPETL 185
           IFFE GIA PETKEISSLSVEPCEGE+L+VTVFEIK SEIPAFI+RE EFRFLAV+PET+
Sbjct: 125 IFFELGIANPETKEISSLSVEPCEGESLVVTVFEIKSSEIPAFIQRELEFRFLAVVPETM 184

Query: 186 DGKPFTNRAVLCARSSDEEFFQIRCKGN 213
           +GKP+TN AVLC R SDEEFFQIRCKGN
Sbjct: 185 EGKPYTNSAVLCGRYSDEEFFQIRCKGN 212

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|363806706|ref|NP_001242012.1| uncharacterized protein LOC100781602 [Glycine max] gi|255641907|gb|ACU21222.1| unknown [Glycine max]

 Score =  237 bits (604), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 133/206 (64%), Positives = 146/206 (70%), Gaps = 23/206 (11%)

Query: 9   HICPLASFACTLRSK-ALSFQLRVSTHSPLHSSLRCRRPPPMSSDYAGTNFPANKLEPIQ 67
            + PLAS AC  R+  +LSF                  P P+S     +  P       +
Sbjct: 15  QLSPLASRACHQRATLSLSFP-----------------PLPLSKLAMSSAAPVT-----E 52

Query: 68  LNDESDFYQITSPDGFISISGFGSLLSENSARSTFPNLINFRVAKLRGFRRVFAHVAPIF 127
           L+DESDF  + SPDG ISI GFGSLLSE SARSTFP+L NFR A+L  FRRVFAHVAP+F
Sbjct: 53  LSDESDFESLLSPDGHISICGFGSLLSERSARSTFPDLANFRTARLNRFRRVFAHVAPVF 112

Query: 128 FERGIAKPETKEISSLSVEPCEGETLIVTVFEIKKSEIPAFIKREHEFRFLAVLPETLDG 187
           FERGIAKPET EISSLSVEPCEGETL+VTVFEI+KSEIP FIKRE EFRFLAVLPETLDG
Sbjct: 113 FERGIAKPETMEISSLSVEPCEGETLVVTVFEIRKSEIPDFIKREVEFRFLAVLPETLDG 172

Query: 188 KPFTNRAVLCARSSDEEFFQIRCKGN 213
           K F   AVLCAR SDEEFF  RCKGN
Sbjct: 173 KAFDFPAVLCARYSDEEFFDNRCKGN 198

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225431810|ref|XP_002271042.1| PREDICTED: uncharacterized protein LOC100265416 [Vitis vinifera] gi|296083319|emb|CBI22955.3| unnamed protein product [Vitis vinifera]

 Score =  236 bits (602), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 122/184 (66%), Positives = 145/184 (78%), Gaps = 3/184 (1%)

Query: 31  VSTHSPLHSSLRCRRPPPMSSDYAGTNFPANKLEPIQLNDESDFYQI-TSPDGFISISGF 89
           ++T++ LH   +  R     + Y+G     N  E  +L+DESDF ++ +S D  +SI GF
Sbjct: 42  IATYTALHFVAKPDRWASSPALYSGDVI--NHSELTELHDESDFERLASSNDDLLSICGF 99

Query: 90  GSLLSENSARSTFPNLINFRVAKLRGFRRVFAHVAPIFFERGIAKPETKEISSLSVEPCE 149
           GSLLSE SARSTFP+LINFRVA+L GFRRVFAHV P+FFERGIAKPET EIS LSVEPCE
Sbjct: 100 GSLLSERSARSTFPDLINFRVARLNGFRRVFAHVTPVFFERGIAKPETMEISGLSVEPCE 159

Query: 150 GETLIVTVFEIKKSEIPAFIKREHEFRFLAVLPETLDGKPFTNRAVLCARSSDEEFFQIR 209
           GE+LIVTVFEI +SEIP++IKRE E+RFLAV PETLDG PFT+ AVLCAR SDEEF QIR
Sbjct: 160 GESLIVTVFEIHRSEIPSYIKREIEYRFLAVFPETLDGTPFTSPAVLCARYSDEEFLQIR 219

Query: 210 CKGN 213
           CKG+
Sbjct: 220 CKGS 223

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449464742|ref|XP_004150088.1| PREDICTED: uncharacterized protein LOC101211371 [Cucumis sativus]

 Score =  234 bits (596), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 123/182 (67%), Positives = 143/182 (78%), Gaps = 4/182 (2%)

Query: 33  THSPLHS-SLRCRRPPPMSSDYAGTNFPANKLEPIQLNDESDFYQITSPDGFISISGFGS 91
            HSPL S S   +R  P++     +N   N+ EP +L DESDF  I S   +IS+ GFGS
Sbjct: 43  AHSPLCSGSGLLQRISPIN---VLSNSLVNEAEPKELRDESDFEAIFSDSDYISVCGFGS 99

Query: 92  LLSENSARSTFPNLINFRVAKLRGFRRVFAHVAPIFFERGIAKPETKEISSLSVEPCEGE 151
           LLSE SARSTFP+LINFRVA+L GFRR+F +VAP+FFERGIAKPETKEISSL  EPCEGE
Sbjct: 100 LLSERSARSTFPDLINFRVARLNGFRRIFGNVAPVFFERGIAKPETKEISSLCAEPCEGE 159

Query: 152 TLIVTVFEIKKSEIPAFIKREHEFRFLAVLPETLDGKPFTNRAVLCARSSDEEFFQIRCK 211
            +IVTVFEIKKSE+PAFI+RE EFRFLAV PETL GK +   AVLC+RS+DEEFFQ+RCK
Sbjct: 160 NIIVTVFEIKKSEVPAFIQREIEFRFLAVFPETLHGKAYKKPAVLCSRSTDEEFFQVRCK 219

Query: 212 GN 213
           GN
Sbjct: 220 GN 221

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449501489|ref|XP_004161381.1| PREDICTED: uncharacterized LOC101211371 [Cucumis sativus]

 Score =  231 bits (588), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 123/183 (67%), Positives = 144/183 (78%), Gaps = 5/183 (2%)

Query: 33  THSPLHS-SLRCRRPPPMSSDYAGTNFPANKLEPIQLNDESDFYQITSPDGFISISGFGS 91
            HSPL S S   +R  P++     +N   N+ EP +L DESDF  I S   +IS+ GFGS
Sbjct: 43  AHSPLCSGSGLLQRISPIN---VLSNSLVNEAEPKELRDESDFEAIFSDSDYISVCGFGS 99

Query: 92  LLSENSARSTFPNLINFRVAKLRGFRRVFAHVAPIFFERGIAKPETKEISSLSVEPCEGE 151
           LLSE SARSTFP+LINFRVA+L GFRR+F +VAP+FFERGIAKPETKEISSL  EPCEGE
Sbjct: 100 LLSERSARSTFPDLINFRVARLNGFRRIFGNVAPVFFERGIAKPETKEISSLCAEPCEGE 159

Query: 152 TLIVTVFEIKKSEIPAFIKREHEFRFLAVLPETLDGKPFTN-RAVLCARSSDEEFFQIRC 210
            +IVTVFEIKKSE+PAFI+RE EFRFLAV PETL GK + N R VLC+RS+DEEFFQ+RC
Sbjct: 160 NIIVTVFEIKKSEVPAFIQREIEFRFLAVFPETLHGKAYKNQRYVLCSRSTDEEFFQVRC 219

Query: 211 KGN 213
           KG+
Sbjct: 220 KGH 222

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449464740|ref|XP_004150087.1| PREDICTED: uncharacterized protein LOC101211120 [Cucumis sativus]

 Score =  227 bits (578), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 115/158 (72%), Positives = 128/158 (81%)

Query: 56  TNFPANKLEPIQLNDESDFYQITSPDGFISISGFGSLLSENSARSTFPNLINFRVAKLRG 115
           +N   N+ EP +L DESDF  I S   +IS+SGFGSLLS  SAR TFP LINFRVA+L G
Sbjct: 2   SNSMLNEAEPKELRDESDFEVIFSDSDYISVSGFGSLLSVRSARGTFPELINFRVARLNG 61

Query: 116 FRRVFAHVAPIFFERGIAKPETKEISSLSVEPCEGETLIVTVFEIKKSEIPAFIKREHEF 175
           FRR F HVAPIFFERGIAKPETKEISSL  EPCE E +I+TVFEIKKSEIPAFI+RE EF
Sbjct: 62  FRRFFGHVAPIFFERGIAKPETKEISSLCSEPCEEENIIITVFEIKKSEIPAFIQREIEF 121

Query: 176 RFLAVLPETLDGKPFTNRAVLCARSSDEEFFQIRCKGN 213
           RFLAV PETLDGK +   AVLC+R +DEEFFQ+RCKGN
Sbjct: 122 RFLAVFPETLDGKIYDKPAVLCSRFTDEEFFQVRCKGN 159

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|294462572|gb|ADE76832.1| unknown [Picea sitchensis]

 Score =  226 bits (576), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 111/154 (72%), Positives = 128/154 (83%)

Query: 60  ANKLEPIQLNDESDFYQITSPDGFISISGFGSLLSENSARSTFPNLINFRVAKLRGFRRV 119
           A   +  +LND +DF  I SPDG++SISGFGSLLSE SARSTFPNL  FRVA LRGFRRV
Sbjct: 3   ATTTQYTELNDAADFDSIASPDGYVSISGFGSLLSERSARSTFPNLQTFRVAVLRGFRRV 62

Query: 120 FAHVAPIFFERGIAKPETKEISSLSVEPCEGETLIVTVFEIKKSEIPAFIKREHEFRFLA 179
           FAH APIFFERGIA+ ETKEISSLSVEPC GE +IVTVFEI KSE+PAFI+REHEFRFL 
Sbjct: 63  FAHTAPIFFERGIARMETKEISSLSVEPCPGEFIIVTVFEIHKSEVPAFIEREHEFRFLV 122

Query: 180 VLPETLDGKPFTNRAVLCARSSDEEFFQIRCKGN 213
            +PE L GKPF++ +V+C+R SDEE+  +RCKGN
Sbjct: 123 AVPEDLFGKPFSHPSVVCSRYSDEEYRLVRCKGN 156

Source: Picea sitchensis

Species: Picea sitchensis

Genus: Picea

Family: Pinaceae

Order: Coniferales

Class: Coniferopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224110318|ref|XP_002315483.1| predicted protein [Populus trichocarpa] gi|222864523|gb|EEF01654.1| predicted protein [Populus trichocarpa]

 Score =  225 bits (574), Expect = 8e-57,   Method: Compositional matrix adjust.
 Identities = 117/152 (76%), Positives = 130/152 (85%), Gaps = 2/152 (1%)

Query: 64  EPIQLNDESDFYQITSPDGFIS--ISGFGSLLSENSARSTFPNLINFRVAKLRGFRRVFA 121
           EPI+L D+SDF    S        + GFGSLLSE SARSTFP+L+NFRVA+L GFRRVFA
Sbjct: 9   EPIELRDDSDFRSFLSSSDSDLISVCGFGSLLSERSARSTFPDLLNFRVARLNGFRRVFA 68

Query: 122 HVAPIFFERGIAKPETKEISSLSVEPCEGETLIVTVFEIKKSEIPAFIKREHEFRFLAVL 181
           HVAPIFFERGIAKPETKEISSLSVEPCEGE L+VTVFEI+KSEIPAF++RE EFRFLAV+
Sbjct: 69  HVAPIFFERGIAKPETKEISSLSVEPCEGEGLVVTVFEIEKSEIPAFMERELEFRFLAVV 128

Query: 182 PETLDGKPFTNRAVLCARSSDEEFFQIRCKGN 213
           PETLDGKPF   AVLCAR SDEEFFQ+RCKG+
Sbjct: 129 PETLDGKPFDFPAVLCARYSDEEFFQVRCKGS 160

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	223
TAIR|locus:2129985	289	AT4G16060 "AT4G16060" [Arabido	0.663	0.512	0.804	2.2e-59

TAIR|locus:2129985 AT4G16060 "AT4G16060" [Arabidopsis thaliana (taxid:3702)]

 Score = 609 (219.4 bits), Expect = 2.2e-59, P = 2.2e-59
 Identities = 119/148 (80%), Positives = 132/148 (89%)

Query:    66 IQLNDESDFYQITSPDGFISISGFGSLLSENSARSTFPNLINFRVAKLRGFRRVFAHVAP 125
             ++L DESDF ++ S D  ISI+GFGSLLSE SARSTFP+L NFR+AKL+GFRRVFAH AP
Sbjct:    57 MELEDESDFEKLLSSDNRISITGFGSLLSERSARSTFPDLENFRIAKLQGFRRVFAHSAP 116

Query:   126 IFFERGIAKPETKEISSLSVEPCEGETLIVTVFEIKKSEIPAFIKREHEFRFLAVLPETL 185
             IFFERGIA PETKEISSLSVEPCEGE+L+VTVFEIK SEIPAFI RE EFRFLAV+PETL
Sbjct:   117 IFFERGIANPETKEISSLSVEPCEGESLVVTVFEIKSSEIPAFIGRELEFRFLAVVPETL 176

Query:   186 DGKPFTNRAVLCARSSDEEFFQIRCKGN 213
             +GKP+TN AVLC R SDEEFFQIRCKGN
Sbjct:   177 EGKPYTNSAVLCGRYSDEEFFQIRCKGN 204


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.323   0.136   0.408    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      223       223   0.00098  112 3  11 22  0.47    32
                                                     32  0.40    36


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  1
  No. of states in DFA:  574 (61 KB)
  Total size of DFA:  163 KB (2097 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  21.55u 0.17s 21.72t   Elapsed:  00:00:00
  Total cpu time:  21.55u 0.17s 21.72t   Elapsed:  00:00:00
  Start:  Fri May 10 18:17:28 2013   End:  Fri May 10 18:17:28 2013

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0009507 "chloroplast" evidence=ISM;IDA

GO:0009570 "chloroplast stroma" evidence=IDA

GO:0005829 "cytosol" evidence=IDA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input:
	AT4G16060	unknown protein; unknown protein; FUNCTIONS IN- molecular_function unknown; INVOLVED IN- biological_process unknown; LOCATED IN- chloroplast, chloroplast stroma; EXPRESSED IN- 22 plant structures; EXPRESSED DURING- 13 growth stages; Has 23 Blast hits to 22 proteins in 7 species- Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 20; Viruses - 0; Other Eukaryotes - 1 (source- NCBI BLink). (289 aa)
		(Arabidopsis thaliana)
Predicted Functional Partners:
	AT4G16070	lipase class 3 family protein; lipase class 3 family protein; FUNCTIONS IN- triacylglycerol lip [...] (654 aa)							•		0.970
	AT2G43370	U1 small nuclear ribonucleoprotein 70 kDa, putative; U1 small nuclear ribonucleoprotein 70 kDa, [...] (333 aa)							•		0.750
	AT3G04160	unknown protein; unknown protein; FUNCTIONS IN- molecular_function unknown; INVOLVED IN- biolog [...] (712 aa)							•		0.744
	AT2G46200	unknown protein; unknown protein; FUNCTIONS IN- molecular_function unknown; INVOLVED IN- biolog [...] (382 aa)							•		0.744
	AT1G09230	RNA recognition motif (RRM)-containing protein; RNA recognition motif (RRM)-containing protein; [...] (442 aa)							•		0.744
	AT5G43065	transposable element gene; non-LTR retrotransposon family (LINE), has a 2.5e-20 P-value blast m [...] (1339 aa)							•		0.675
	AT5G42905	nucleic acid binding / ribonuclease H; nucleic acid binding / ribonuclease H; FUNCTIONS IN- rib [...] (258 aa)							•		0.675
	AT5G13655	transposable element gene; similar to unknown protein [Arabidopsis thaliana] (TAIR-AT4G11710.1) [...] (395 aa)							•		0.675
	AT2G33440	splicing factor family protein; splicing factor family protein; FUNCTIONS IN- RNA binding, nucl [...] (247 aa)							•		0.659
	AT5G06805	transposable element gene; similar to RNase H domain-containing protein [Arabidopsis thaliana] [...] (594 aa)							•		0.651

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	223
cd06661	99	GGCT_like GGCT-like domains, also called AIG2-like	99.23
PF04752	178	ChaC: ChaC-like protein; InterPro: IPR006840 The C	98.99
COG3703	190	ChaC Uncharacterized protein involved in cation tr	98.44
PHA03014	163	hypothetical protein; Provisional	98.17
KOG3182	212	consensus Predicted cation transporter [Inorganic	98.05
PF06094	102	AIG2: AIG2-like family; InterPro: IPR009288 AIG2 i	97.54
KOG4059	193	consensus Uncharacterized conserved protein [Funct	97.5
PF13772	83	AIG2_2: AIG2-like family; PDB: 2QIK_A 2RBH_B 2I5T_	94.33

>cd06661 GGCT_like GGCT-like domains, also called AIG2-like family

Probab=99.23  E-value=1.4e-11  Score=88.31  Aligned_cols=88  Identities=19%  Similarity=0.298  Sum_probs=73.7

Q ss_pred             EEeecccccccccCcCCCCcccceeeeecCceEeeccccchhhhccCCCCCCcceeeeeeeeCCCceEEEEEEeeeCCCh
Q 027482           86 ISGFGSLLSENSARSTFPNLINFRVAKLRGFRRVFAHVAPIFFERGIAKPETKEISSLSVEPCEGETLIVTVFEIKKSEI  165 (223)
Q Consensus        86 ifGYGSLVSe~SAR~tFPdL~nfR~ArL~GwRRvw~Hta~iFF~RGIA~~~treiAsLSVeP~~g~~Ivg~VfEVP~~dw  165 (223)
                      ||+||||++.......-+.....++|+|.||++.|....                ...+++|++|..+.|.|++++.++|
T Consensus         1 ~F~YGsl~~~~~~~~~~~~~~~~~~a~l~g~~l~~~~~~----------------~~p~~~~~~~~~v~G~v~~i~~~~l   64 (99)
T cd06661           1 LFVYGTLMDGEVLHARLGRALFLGPATLKGYRLVFGGGS----------------GYPGLVPGPGARVWGELYEVDPEDL   64 (99)
T ss_pred             CEEeccCCChhHhHhhCCCCceEEEEEecCcEEEecCCC----------------ccCEEEeCCCCEEEEEEEEECHHHH
Confidence            699999999977554444455788999999999998432                4457888999999999999999999


Q ss_pred             hhhhhccc---ceEeeeccccccCCCc
Q 027482          166 PAFIKREH---EFRFLAVLPETLDGKP  189 (223)
Q Consensus       166 pALdeRE~---eY~rlaV~~~~ldG~~  189 (223)
                      +.||++|.   .|++..|.....+|..
T Consensus        65 ~~LD~~E~~~~~Y~r~~v~v~~~~~~~   91 (99)
T cd06661          65 ARLDAFEGVPGGYRREEVEVELEDGEG   91 (99)
T ss_pred             HhhhhhcCCCCCeEEEEEEEEeCCCCE
Confidence            99999999   7999999887777654

Gamma-glutamyl cyclotransferase (GGCT) catalyzes the formation of pyroglutamic acid (5-oxoproline) from dipeptides containing gamma-glutamyl, and is a dimeric protein. In Homo sapiens, the protein is encoded by the gene C7orf24, and the enzyme participates in the gamma-glutamyl cycle. Hereditary defects in the gamma-glutamyl cycle have been described for some of the genes involved, but not for C7orf24. The synthesis and metabolism of glutathione (L-gamma-glutamyl-L-cysteinylglycine) ties the gamma-glutamyl cycle to numerous cellular processes; glutathione acts as a ubiquitous reducing agent in reductive mechanisms involved in protein and DNA synthesis, transport processes, enzyme activity, and metabolism. AIG2 (avrRpt2-induced gene) is an Arabidopsis protein that exhibits RPS2- and avrRpt2-dependent induction early after infection with Pseudomonas syringae pv maculicola strain ES4326 carrying avrRpt2. avrRpt2 is an avir

>PF04752 ChaC: ChaC-like protein; InterPro: IPR006840 The ChaC protein is thought to be associated with the putative ChaA Ca2+/H+ cation transport protein in Escherichia coli

Probab=98.99  E-value=1.6e-09  Score=91.34  Aligned_cols=107  Identities=21%  Similarity=0.344  Sum_probs=78.5

Q ss_pred             EEEEeecccccccccCcCCCCcccceeeeecCceEeeccccchhhhccCCCCCCcceeeeeeeeCCCceEEEEEEeeeCC
Q 027482           84 ISISGFGSLLSENSARSTFPNLINFRVAKLRGFRRVFAHVAPIFFERGIAKPETKEISSLSVEPCEGETLIVTVFEIKKS  163 (223)
Q Consensus        84 IsifGYGSLVSe~SAR~tFPdL~nfR~ArL~GwRRvw~Hta~iFF~RGIA~~~treiAsLSVeP~~g~~Ivg~VfEVP~~  163 (223)
                      |-+||||||+-.    ..|+ ...-++|.|+||+|.|......  -||-+.-+.+   -|+.++.++....|++|.||++
T Consensus         1 ~WVFGYGSLiW~----p~f~-~~e~~~a~i~Gy~R~F~~~s~~--hRGTpe~PGr---vltL~~~~~~~c~Gvayrv~~~   70 (178)
T PF04752_consen    1 LWVFGYGSLIWN----PGFP-YAERRPAYIKGYHRRFCQGSTD--HRGTPEQPGR---VLTLDPGEEGSCWGVAYRVPEE   70 (178)
T ss_pred             CEEEEeccceeC----CCCC-ccceEEEEecCcccceEeeccc--cCCCcCCCcc---eeeeeeCCCCEEEEEEEEecCc
Confidence            358999999987    5565 4568899999999999977754  4776544443   4788888889999999999985


Q ss_pred             C----hhhhhhccc--ceEeeeccc---cccCCCcCCCceEEEecc
Q 027482          164 E----IPAFIKREH--EFRFLAVLP---ETLDGKPFTNRAVLCARS  200 (223)
Q Consensus       164 d----wpALdeRE~--eY~rlaV~~---~~ldG~~~~~~AVlCar~  200 (223)
                      +    +..|+.||.  .|.+..+..   .+.++.+...+|++..-.
T Consensus        71 ~~~~~l~~L~~RE~~~Gy~~~~v~~~~~~~~~~~~~~~~al~yv~~  116 (178)
T PF04752_consen   71 DAEEVLEYLDEREMIGGYTRHWVPFYPEVDTDSGPVIVEALVYVAD  116 (178)
T ss_pred             CHHHHHHHHhhcccccccceEEEEEEEeccCCCCceEEEEEEEEec
Confidence            5    679999999  587766555   233344433455554433

Its function is not known. This family also includes homologues regions from several other bacterial and eukaryotic proteins.

>COG3703 ChaC Uncharacterized protein involved in cation transport [Inorganic ion transport and metabolism]

Probab=98.44  E-value=3.5e-07  Score=79.38  Aligned_cols=82  Identities=21%  Similarity=0.276  Sum_probs=62.2

Q ss_pred             CCCcEEEEeecccccccccCcCCCCcccceeeeecCceEeeccccchhhhccCCCCCCcceeeeeeeeCCCceEEEEEEe
Q 027482           80 PDGFISISGFGSLLSENSARSTFPNLINFRVAKLRGFRRVFAHVAPIFFERGIAKPETKEISSLSVEPCEGETLIVTVFE  159 (223)
Q Consensus        80 ~~g~IsifGYGSLVSe~SAR~tFPdL~nfR~ArL~GwRRvw~Hta~iFF~RGIA~~~treiAsLSVeP~~g~~Ivg~VfE  159 (223)
                      +...+-+||||||+=.--  ..   ...-++|.++||+|.|......  -||-++-+..-+...     .|.+..|++|.
T Consensus         8 ~~~~~WVFgYGSLmW~P~--f~---~~e~~~a~~~G~~Rsfc~~s~~--~RGT~~~PGlvl~L~-----~GGsc~GvafR   75 (190)
T COG3703           8 DPDELWVFGYGSLMWNPG--FE---FTEVRRATLHGYHRSFCLRSTD--HRGTAEQPGLVLGLD-----RGGSCEGVAYR   75 (190)
T ss_pred             CCCCeEEEEecceeecCC--cc---ccceeEEEEecceeEEEEEEee--ecCCcCCCceEEEee-----CCCcEEEEEEE
Confidence            333399999999998722  33   3468899999999999877643  478766665544433     89999999999


Q ss_pred             eeCCCh----hhhhhccc
Q 027482          160 IKKSEI----PAFIKREH  173 (223)
Q Consensus       160 VP~~dw----pALdeRE~  173 (223)
                      ||++.+    .-|.+||-
T Consensus        76 ip~~~~~~v~~yL~~RE~   93 (190)
T COG3703          76 IPEAHAEEVLEYLREREM   93 (190)
T ss_pred             cCchhhHHHHHHHHHhhc
Confidence            996665    57899998

>PHA03014 hypothetical protein; Provisional

Probab=98.17  E-value=3.4e-06  Score=70.82  Aligned_cols=91  Identities=13%  Similarity=0.182  Sum_probs=72.1

Q ss_pred             EEEEeecccccccccCcCCC---CcccceeeeecCceEeeccccchhhhccCCCCCCcceeeeeeeeCCCceEEEEEEee
Q 027482           84 ISISGFGSLLSENSARSTFP---NLINFRVAKLRGFRRVFAHVAPIFFERGIAKPETKEISSLSVEPCEGETLIVTVFEI  160 (223)
Q Consensus        84 IsifGYGSLVSe~SAR~tFP---dL~nfR~ArL~GwRRvw~Hta~iFF~RGIA~~~treiAsLSVeP~~g~~Ivg~VfEV  160 (223)
                      .-+|+|||=||....+..=|   +-.....|+|.||+=.+...+            ...=+..|++|++|..+-|+|.||
T Consensus         3 ~~YfAYGSNl~~~qm~~Rcp~~~~a~~vg~a~L~~~~~~L~f~~------------~~~Ga~ATIvp~~g~~V~Gvlw~i   70 (163)
T PHA03014          3 KYYFGYGANQNINYLIHMHKLKIDFLNIKIGIILGHSFKLCYSK------------EIDSVIASIKKDDNGIVFGILYEF   70 (163)
T ss_pred             eEEEEEccCcCHHHHHHhCCCCCCCceEEEEEeeccceEEeccC------------CcCCceEEEEECCCCEEEEEEEEe
Confidence            35899999998888888878   766677999996643333111            123345799999999999999999


Q ss_pred             eCCChhhhhhccc----ceEeeeccccccC
Q 027482          161 KKSEIPAFIKREH----EFRFLAVLPETLD  186 (223)
Q Consensus       161 P~~dwpALdeRE~----eY~rlaV~~~~ld  186 (223)
                      +.+|+++||.-|-    -|+++.|....++
T Consensus        71 ~~~dl~~LD~~EGvp~~~Y~~~~v~V~~~~  100 (163)
T PHA03014         71 NESIMKKFDKQEFIDKNIYKLAKMNVLDLE  100 (163)
T ss_pred             CHHHHHHHhhhcCCCcCceEEEEEEEEeCC
Confidence            9999999999997    5999988887665

>KOG3182 consensus Predicted cation transporter [Inorganic ion transport and metabolism]

Probab=98.05  E-value=1e-05  Score=71.37  Aligned_cols=121  Identities=17%  Similarity=0.229  Sum_probs=86.3

Q ss_pred             ccCCCCcEEEEeecccccccccCcCCCCcccceeeeecCceEeeccccchhhhccCCCCCCcceeeeeeeeCCCceEEEE
Q 027482           77 ITSPDGFISISGFGSLLSENSARSTFPNLINFRVAKLRGFRRVFAHVAPIFFERGIAKPETKEISSLSVEPCEGETLIVT  156 (223)
Q Consensus        77 ~~~~~g~IsifGYGSLVSe~SAR~tFPdL~nfR~ArL~GwRRvw~Hta~iFF~RGIA~~~treiAsLSVeP~~g~~Ivg~  156 (223)
                      -.+++..+=|||||||+=.    ..|+ ...-++|-++||+|+|=.-..  +-||..+-..|-   +|.+|.++.---|+
T Consensus         3 ~~s~~~~lWVFGYGSLiW~----Pgf~-y~~~~~gfI~Gy~RrF~q~s~--dHRGtp~~PGRv---~TLi~~~e~~~wGv   72 (212)
T KOG3182|consen    3 TTSDPMALWVFGYGSLIWK----PGFH-YDESIPGFIKGYKRRFWQGST--DHRGTPEHPGRV---ATLIPYEEAITWGV   72 (212)
T ss_pred             CCCCCceEEEEeecceeec----CCCC-ccccchhhheehhhheecccc--ccCCCCCCCcee---EEeecCCcceEeeE
Confidence            3567788999999999977    3333 345889999999877654332  589998877775   46677666655899


Q ss_pred             EEeeeCCC----hhhhhhccc-ceEeeeccccccCCC--cCCCceEEEeccChHHHHH
Q 027482          157 VFEIKKSE----IPAFIKREH-EFRFLAVLPETLDGK--PFTNRAVLCARSSDEEFFQ  207 (223)
Q Consensus       157 VfEVP~~d----wpALdeRE~-eY~rlaV~~~~ldG~--~~~~~AVlCar~SDeeY~~  207 (223)
                      +|.|++..    +.-|+.||. .|.+..|.+-..|+.  +--..+++|+.-.|.+|+.
T Consensus        73 ay~V~g~~~~~~l~yl~~RE~nGY~~~~v~f~~e~~~~~p~v~~vlvyvaTp~N~~yl  130 (212)
T KOG3182|consen   73 AYRVRGKQASEVLEYLNVRELNGYTTHEVEFYPEDAAELPEVLGVLVYVATPDNEYYL  130 (212)
T ss_pred             EEEecchhHHHHHHHHHHHhhcCcceeeeeeeccCCCCCCceEEEEEEEecCCCcccc
Confidence            99998743    345778887 678877776443333  5556677888888877653

>PF06094 AIG2: AIG2-like family; InterPro: IPR009288 AIG2 is an Arabidopsis protein that exhibit RPS2- and avrRpt2-dependent induction early after infection with Pseudomonas syringae pv maculicola strain ES4326 carrying avrRpt2 []

Probab=97.54  E-value=0.00023  Score=52.03  Aligned_cols=86  Identities=20%  Similarity=0.212  Sum_probs=58.1

Q ss_pred             EEeecccccccccCcCCCC---cccceeeeecCceEeeccccchhhhccCCCCCCcceeeeeeeeCCCc-eEEEEEEeee
Q 027482           86 ISGFGSLLSENSARSTFPN---LINFRVAKLRGFRRVFAHVAPIFFERGIAKPETKEISSLSVEPCEGE-TLIVTVFEIK  161 (223)
Q Consensus        86 ifGYGSLVSe~SAR~tFPd---L~nfR~ArL~GwRRvw~Hta~iFF~RGIA~~~treiAsLSVeP~~g~-~Ivg~VfEVP  161 (223)
                      +|-||||++.....+.++.   -...+.+.+.  .+.+.                ..-.+-.+.|+++. .|.|.|++|.
T Consensus         1 lFvYGTL~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~----------------~~~~yP~l~~~~~~~~V~G~l~~v~   62 (102)
T PF06094_consen    1 LFVYGTLMDGEVNHSVLGRPGAKFIGEPATLG--GRYLY----------------GGGGYPALVPGEGSGRVEGELYEVD   62 (102)
T ss_dssp             EEESSTTSTTSTTGHHGTSGSSEEEEEEEEEE--EEEEE----------------TTSSCEEEESCTTSSEEEEEEEEE-
T ss_pred             CEEECCCCCCCcChhhhhccceEEEEeeEEEE--eEEEe----------------CCCCCCEEEEcCCCCEEEEEEEEEC
Confidence            6899999998765544431   0011222222  22221                22334567778887 9999999999


Q ss_pred             CCChhhhhhccc---ceEeeeccccccCCCc
Q 027482          162 KSEIPAFIKREH---EFRFLAVLPETLDGKP  189 (223)
Q Consensus       162 ~~dwpALdeRE~---eY~rlaV~~~~ldG~~  189 (223)
                      .++++.||+-|-   .|+|..+.-...||+.
T Consensus        63 ~~~l~~LD~~E~~~~~Y~R~~v~v~~~~g~~   93 (102)
T PF06094_consen   63 DEELARLDEYEGEGSLYRRVRVPVELGDGEE   93 (102)
T ss_dssp             HHHHHHHHHHTTTTTSEEEEEEEEECCTSSE
T ss_pred             HHHHHhhHhhcCCCCceEEEEEEEEeCCCCE
Confidence            999999999973   9999998887777765

Its structure consists of a five-stranded beta-barrel surrounded by two alpha-helices and a small beta-sheet. A long flexible alpha-helix protrudes from the structure at the C-terminal end. Conserved residues in a hydrophilic cavity, which are able to bind small ligands, may act as an active site in AIG2-like proteins [].; PDB: 1XHS_A 2KL2_A 1VKB_A 3JUD_A 3JUB_A 3JUC_A 2JQV_A 2QIK_A 2G0Q_A 1V30_A.

>KOG4059 consensus Uncharacterized conserved protein [Function unknown]

Probab=97.50  E-value=0.00011  Score=63.89  Aligned_cols=119  Identities=25%  Similarity=0.309  Sum_probs=90.0

Q ss_pred             EEEEeecc-cccccccCcCCCCcccceeeeecCceEeeccccchhhhccCCCCCCcceeeeeeeeCCCceEEEEEEeeeC
Q 027482           84 ISISGFGS-LLSENSARSTFPNLINFRVAKLRGFRRVFAHVAPIFFERGIAKPETKEISSLSVEPCEGETLIVTVFEIKK  162 (223)
Q Consensus        84 IsifGYGS-LVSe~SAR~tFPdL~nfR~ArL~GwRRvw~Hta~iFF~RGIA~~~treiAsLSVeP~~g~~Ivg~VfEVP~  162 (223)
                      ..||+||| ||-+| -+..=|.-.-+=+|+|..||=.|+....           +-.=+.-++.|.+|.++-|+|--+|.
T Consensus        24 FlYFafGSNlL~~R-Ih~rnpsA~~~c~a~L~dfrLdFan~S~-----------~W~G~vATI~~t~GdeVWG~vWKm~~   91 (193)
T KOG4059|consen   24 FLYFAFGSNLLIKR-IHIRNPSAVRICPALLPDFRLDFANESA-----------GWSGSVATIVPTQGDEVWGTVWKMDL   91 (193)
T ss_pred             hhhhhcccchhhhh-eeecCCCceeeccccCcceeeecccccc-----------ccccceeEEecCCCCeEEEEEEEccc
Confidence            57899999 55543 2334454556678999999999997663           33445668999999999999999999


Q ss_pred             CChhhhhhcc---cc-eEeeeccccccCCCcCCCceEEEec-cCh-----HHHHHhhcCccc
Q 027482          163 SEIPAFIKRE---HE-FRFLAVLPETLDGKPFTNRAVLCAR-SSD-----EEFFQIRCKGNY  214 (223)
Q Consensus       163 ~dwpALdeRE---~e-Y~rlaV~~~~ldG~~~~~~AVlCar-~SD-----eeY~~~RC~~~~  214 (223)
                      +.+|.|||.|   .. |.++.|-..+.+|+.+++.+-+=.- ++|     ..|.+.-|+|.+
T Consensus        92 snl~slDeQEgv~~G~Y~~~~V~V~t~eg~~itcR~Yl~snl~~~P~~PSp~Yk~~i~~GAk  153 (193)
T KOG4059|consen   92 SNLPSLDEQEGVSQGIYEPRTVYVKTHEGESITCRAYLLSNLYELPKQPSPTYKQCIVKGAK  153 (193)
T ss_pred             ccCccchhhhcccccceEEEEEEEecCCCceeehhHhhhhhhhhccCCCCchHHhhhhhccc
Confidence            9999999999   55 9999999999999876655543322 122     367777777654

>PF13772 AIG2_2: AIG2-like family; PDB: 2QIK_A 2RBH_B 2I5T_B 2Q53_A 2PN7_B 3CRY_A

Probab=94.33  E-value=0.056  Score=39.70  Aligned_cols=37  Identities=24%  Similarity=0.471  Sum_probs=33.9

Q ss_pred             EEEEEEeeeCCChhhhhhccc----ceEeeeccccccCCCc
Q 027482          153 LIVTVFEIKKSEIPAFIKREH----EFRFLAVLPETLDGKP  189 (223)
Q Consensus       153 Ivg~VfEVP~~dwpALdeRE~----eY~rlaV~~~~ldG~~  189 (223)
                      +.|+|++|+.++++.||.+|.    .|++..|.....||++
T Consensus         2 V~Gvly~l~~~d~~~LD~~Eg~~~g~Y~~~~v~V~~~~g~~   42 (83)
T PF13772_consen    2 VWGVLYELSEEDLESLDRYEGVPIGAYRRIEVTVSTADGKP   42 (83)
T ss_dssp             EEEEEEEEEGGGHHHHHHHTTTTTTSEEEEEEEEEETTCEE
T ss_pred             EEEEEEEECHHHHHHHHHhcCCCCCCEEEEEEEEEcCCCCE
Confidence            679999999999999999998    7999999988888876

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	223
3cry_A	188	Gamma-glutamyl cyclotransferase; enzyme, oxoprolin	9e-04

>3cry_A Gamma-glutamyl cyclotransferase; enzyme, oxoproline; 1.70A {Homo sapiens} PDB: 2pn7_A 2rbh_A 2i5t_A* 2q53_A Length = 188

 Score = 38.2 bits (88), Expect = 9e-04
 Identities = 20/108 (18%), Positives = 42/108 (38%), Gaps = 11/108 (10%)

Query: 88  GFGSLLSENSARSTFPNLINFRVAKLRGFRRVFAHVAPIFFERGIAKPETKEISSLSVEP 147
            +GS L         P+   F VA+L+ F+  F +             +T      ++  
Sbjct: 21  AYGSNLLTERIHLRNPSAAFFCVARLQDFKLDFGN-------SQGKTSQTWHGGIATIFQ 73

Query: 148 CEGETLIVTVFEIKKSEIPAFIKRE----HEFRFLAVLPETLDGKPFT 191
             G+ +   V+++ KS + +  +++      +  + V   T +GK  T
Sbjct: 74  SPGDEVWGVVWKMNKSNLNSLDEQQGVKSGMYVVIEVKVATQEGKEIT 121

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	223
3cry_A	188	Gamma-glutamyl cyclotransferase; enzyme, oxoprolin	99.32
2jqv_A	165	AT3G28950, AIG2 protein-like; structural genomics,	99.23
2qik_A	285	UPF0131 protein YKQA; NESG, SR631, structural geno	99.18
2g0q_A	173	AT5G39720.1 protein; structural genomics, protein	98.86
1v30_A	124	Hypothetical UPF0131 protein PH0828; alpha+beta, s	98.23
1xhs_A	121	Hypothetical UPF0131 protein YTFP; structure, auto	97.33
3jud_A	153	AIG2-like domain-containing protein 1; cyclotransf	96.19
1vkb_A	161	Hypothetical protein; gamma-glutamyl cyclotransfer	96.01
2qik_A	285	UPF0131 protein YKQA; NESG, SR631, structural geno	83.58

>3cry_A Gamma-glutamyl cyclotransferase; enzyme, oxoproline; 1.70A {Homo sapiens} PDB: 2pn7_A 2rbh_A 2i5t_A* 2q53_A

Probab=99.32  E-value=9.2e-13  Score=106.67  Aligned_cols=102  Identities=19%  Similarity=0.244  Sum_probs=77.9

Q ss_pred             CCcEEEEeecccccccccCcCCCCcccceeeeecCceEeeccccchhhhccCCCCCCcceeeeeeeeCCCceEEEEEEee
Q 027482           81 DGFISISGFGSLLSENSARSTFPNLINFRVAKLRGFRRVFAHVAPIFFERGIAKPETKEISSLSVEPCEGETLIVTVFEI  160 (223)
Q Consensus        81 ~g~IsifGYGSLVSe~SAR~tFPdL~nfR~ArL~GwRRvw~Hta~iFF~RGIA~~~treiAsLSVeP~~g~~Ivg~VfEV  160 (223)
                      ...+-|||||||++.......-|+-....+|+|+||||.|.....       .-.....-...+++|++|..+.|.|++|
T Consensus        14 ~~~~~~FaYGSlm~~~~~~~~~~~~~~~~~a~l~gy~l~f~~~~~-------~~~~~~~g~~~~lv~~~g~~V~G~ly~v   86 (188)
T 3cry_A           14 EESFLYFAYGSNLLTERIHLRNPSAAFFCVARLQDFKLDFGNSQG-------KTSQTWHGGIATIFQSPGDEVWGVVWKM   86 (188)
T ss_dssp             CCEEEEEECSGGGSHHHHHHHCTTCEEEEEEEEEEEEEEEEEETT-------CCCTTTSSCEEEEEEEEEEEEEEEEEEE
T ss_pred             CCCEEEEEEccCCCHHHHHhhCCCCceEEEEEEcCEEEEECCCCC-------CCcCCCCCeeEeEEeCCCCEEEEEEEEE
Confidence            357899999999998654333343334679999999999986520       0001123356788999999999999999


Q ss_pred             eCCChhhhhhccc----ceEeeeccccccCCCc
Q 027482          161 KKSEIPAFIKREH----EFRFLAVLPETLDGKP  189 (223)
Q Consensus       161 P~~dwpALdeRE~----eY~rlaV~~~~ldG~~  189 (223)
                      +.++|+.||+||-    .|+++.|.....||+.
T Consensus        87 ~~~~l~~LD~~Eg~~~g~Y~r~~v~V~~~~g~~  119 (188)
T 3cry_A           87 NKSNLNSLDEQQGVKSGMYVVIEVKVATQEGKE  119 (188)
T ss_dssp             EGGGHHHHHHHTTGGGTSCEEEEEEEEETTCCE
T ss_pred             CHHHHHHHHHHhCCCCCcEEEEEEEEEeCCCCE
Confidence            9999999999996    7999998877777854

>2jqv_A AT3G28950, AIG2 protein-like; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG; NMR {Arabidopsis thaliana}

Probab=99.23  E-value=5.4e-12  Score=100.52  Aligned_cols=94  Identities=16%  Similarity=0.169  Sum_probs=75.4

Q ss_pred             CCCCcEEEEeecccccccccCcCCCCcccceeeeecCceEeeccccchhhhccCCCCCCcceeeeeeeeCCCceEEEEEE
Q 027482           79 SPDGFISISGFGSLLSENSARSTFPNLINFRVAKLRGFRRVFAHVAPIFFERGIAKPETKEISSLSVEPCEGETLIVTVF  158 (223)
Q Consensus        79 ~~~g~IsifGYGSLVSe~SAR~tFPdL~nfR~ArL~GwRRvw~Hta~iFF~RGIA~~~treiAsLSVeP~~g~~Ivg~Vf  158 (223)
                      |++..+.+|+||||++.....+.-++....++|.|+||+|.|....                .+..+.|.+|..+.|.|+
T Consensus         4 s~~~~~~vFvYGSL~~~~~~~~~~~~~~~~~~a~l~Gy~~~~~~~~----------------~yP~lv~~~~~~V~G~v~   67 (165)
T 2jqv_A            4 SDPQSHNVFVYGSILEPAVAAVILDRTADTVPAVLHGYHRYKLKGL----------------PYPCIVSSDSGKVNGKVI   67 (165)
T ss_dssp             CCSSCEEEEESSTTSSHHHHHHHTSSCCEEEEEEEETCEECCCTTS----------------SSCCEESCCSSEEEEEEE
T ss_pred             CCCCceEEEEEcCCCCchhhHHHhCCCCccceEEEeCeEEEecCCC----------------CCCEEEECCCCEEEEEEE
Confidence            3456789999999999877544445545689999999999985211                344778888999999999


Q ss_pred             e-eeCCChhhhhhcc-cceEeeeccccccCCC
Q 027482          159 E-IKKSEIPAFIKRE-HEFRFLAVLPETLDGK  188 (223)
Q Consensus       159 E-VP~~dwpALdeRE-~eY~rlaV~~~~ldG~  188 (223)
                      + |+.++|++||++| ..|+|..|.....||.
T Consensus        68 ~~v~~~~l~~LD~~E~~~Y~R~~v~v~~~dg~   99 (165)
T 2jqv_A           68 TGVSDAELNNFDVIEGNDYERVTVEVVRMDNS   99 (165)
T ss_dssp             EEECHHHHHHHHHTTTTSEEEEEEEEEETTTT
T ss_pred             EeCCHHHHHHHHHhccCCcEEEEEEEEECCCC
Confidence            5 9999999999999 7999998887666764

>2qik_A UPF0131 protein YKQA; NESG, SR631, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; HET: CIT; 1.35A {Bacillus subtilis}

Probab=99.18  E-value=2.1e-11  Score=104.69  Aligned_cols=95  Identities=19%  Similarity=0.161  Sum_probs=73.7

Q ss_pred             CCcEEEEeecccccccccCc-CCCCc--ccceeeeecCceEeeccccchhhhccCCCCCCcceeeeeeeeCCCceEEEEE
Q 027482           81 DGFISISGFGSLLSENSARS-TFPNL--INFRVAKLRGFRRVFAHVAPIFFERGIAKPETKEISSLSVEPCEGETLIVTV  157 (223)
Q Consensus        81 ~g~IsifGYGSLVSe~SAR~-tFPdL--~nfR~ArL~GwRRvw~Hta~iFF~RGIA~~~treiAsLSVeP~~g~~Ivg~V  157 (223)
                      .+.+-|||||||||...-.. ..|.-  ....+|+|+||||.|. ..            ..+-...+++|+ |..+.|++
T Consensus       125 ~~~~~yFaYGSnm~~~~~~~~~~p~~~~~~~~~a~L~G~~l~F~-~~------------~~~~g~a~iv~~-g~~v~Gvl  190 (285)
T 2qik_A          125 KNPIYYFAYGSCMDNARFQKAGVDHYFQDPVGRAVLKGYTTRFT-LK------------REDGSRADMLED-GGTTEGVL  190 (285)
T ss_dssp             CSSEEEEECSGGGSSHHHHHHTCGGGSSCEEEEEEEETCEEEEE-EE------------ETTEEEEEEECS-SCEEEEEE
T ss_pred             CCcEEEEEechhcCHhhcccccCCcccceEeEEEEEeCeEEEcC-cC------------CCCCeeeeEEEC-CCEEEEEE
Confidence            35799999999999865333 23332  1236999999999998 22            123345688999 99999999


Q ss_pred             EeeeCCChhhhhhccc----ceEeeeccccccCCCc
Q 027482          158 FEIKKSEIPAFIKREH----EFRFLAVLPETLDGKP  189 (223)
Q Consensus       158 fEVP~~dwpALdeRE~----eY~rlaV~~~~ldG~~  189 (223)
                      ++|+.++|+.||+||-    .|+++.|.....||++
T Consensus       191 y~i~~~~l~~LD~~Eg~~~g~Y~r~~v~v~~~~g~~  226 (285)
T 2qik_A          191 YRIPYSALSYLYKREGVESLTYRPAFVDVEAGGRHY  226 (285)
T ss_dssp             EEECGGGHHHHHHHTTTTTTSEEEEEEEEEETTEEE
T ss_pred             EEECHHHHHHHHHhhCCCCCceEEEEEEEEECCCCE
Confidence            9999999999999994    5999988887777754

>2g0q_A AT5G39720.1 protein; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG, unknown function; NMR {Arabidopsis thaliana}

Probab=98.86  E-value=1.6e-09  Score=87.87  Aligned_cols=95  Identities=17%  Similarity=0.183  Sum_probs=69.7

Q ss_pred             ccCCCCcEEEEeecccccccccCcCCCCcccceeeeecCceEeeccccchhhhccCCCCCCcceeeeeeeeCCCceEEEE
Q 027482           77 ITSPDGFISISGFGSLLSENSARSTFPNLINFRVAKLRGFRRVFAHVAPIFFERGIAKPETKEISSLSVEPCEGETLIVT  156 (223)
Q Consensus        77 ~~~~~g~IsifGYGSLVSe~SAR~tFPdL~nfR~ArL~GwRRvw~Hta~iFF~RGIA~~~treiAsLSVeP~~g~~Ivg~  156 (223)
                      -.+++....+|+||||++.....+--......++|+|.||+|.|.        +|        -.+-.+.|.+|..+.|.
T Consensus        11 ~~~~~~~~~vFvYGSL~~~~~~~~~l~~~~~~~~A~l~Gy~l~~~--------~~--------~~yP~lv~~~g~~V~G~   74 (173)
T 2g0q_A           11 SSDSLQLHNVFVYGSFQDPDVINVMLDRTPEIVSATLPGFQRFRL--------KG--------RLYPCIVPSEKGEVHGK   74 (173)
T ss_dssp             CSCCSSSEEEEECSGGGCHHHHHHHTSSCCEEEEEEEETCEECCC--------CS--------SSCCCEECCTTCEEEEE
T ss_pred             CCCCCCCEEEEEEcCCCCCccCHHHhcCCCceeEEEEcCeEEEee--------CC--------CeeeEEEECCCCEEEEE
Confidence            344567789999999999864221111122468999999997553        11        12336778899999998


Q ss_pred             EE-eeeCCChhhhhhcc-cceEeeeccccccCC
Q 027482          157 VF-EIKKSEIPAFIKRE-HEFRFLAVLPETLDG  187 (223)
Q Consensus       157 Vf-EVP~~dwpALdeRE-~eY~rlaV~~~~ldG  187 (223)
                      |+ +|+.++|+.||++| ..|++..|.....||
T Consensus        75 v~~~v~~~~l~~LD~~Eg~~Y~R~~v~V~~~dg  107 (173)
T 2g0q_A           75 VLMGVTSDELENLDAVEGNEYERVTVGIVREDN  107 (173)
T ss_dssp             EEEEECHHHHHHHHHHHTTTEEEEEEEEEESSS
T ss_pred             EEEEcCHHHHHHHHHHhhcCCEEEEEEEEECCC
Confidence            86 69999999999999 699999987766665

>1v30_A Hypothetical UPF0131 protein PH0828; alpha+beta, structural genomics, unknown function; HET: NHE; 1.40A {Pyrococcus horikoshii} SCOP: d.269.1.1

Probab=98.23  E-value=1.6e-06  Score=67.28  Aligned_cols=79  Identities=16%  Similarity=0.199  Sum_probs=59.7

Q ss_pred             cEEEEeecccccccccCcCCCCcccceeeeecCceEeeccccchhhhccCCCCCCcceeeeeeeeCCCceEEEEEEeeeC
Q 027482           83 FISISGFGSLLSENSARSTFPNLINFRVAKLRGFRRVFAHVAPIFFERGIAKPETKEISSLSVEPCEGETLIVTVFEIKK  162 (223)
Q Consensus        83 ~IsifGYGSLVSe~SAR~tFPdL~nfR~ArL~GwRRvw~Hta~iFF~RGIA~~~treiAsLSVeP~~g~~Ivg~VfEVP~  162 (223)
                      .+.+|-||||++.....+-.++-.-..+|++.||+.. .  +.                +-.+.|.+|. +.|.|++|+.
T Consensus         7 ~~~vFVYGTL~~g~~n~~~l~~a~~~g~a~l~gy~L~-~--g~----------------yP~lv~~~g~-V~Gev~~v~~   66 (124)
T 1v30_A            7 SVRIAVYGTLRKGKPLHWYLKGAKFLGEDWIEGYQLY-F--EY----------------LPYAVKGKGK-LKVEVYEVDK   66 (124)
T ss_dssp             CEEEEECSTTSTTSTTGGGGTTSEEEEEEEEEEEEEE-E--SS----------------SEEEEEEEEE-EEEEEEEECH
T ss_pred             ccEEEEECCCCCchHhHHhcCCCcEEEEEEEeeEEEE-E--CC----------------CCEEEecCCE-EEEEEEEECH
Confidence            3679999999998765554444233467889999887 2  21                1134466676 9999999999


Q ss_pred             CChhhhhhcc--cceEeeecc
Q 027482          163 SEIPAFIKRE--HEFRFLAVL  181 (223)
Q Consensus       163 ~dwpALdeRE--~eY~rlaV~  181 (223)
                      ++|++||+-|  ..|+|..|.
T Consensus        67 ~~l~~LD~~E~~~~Y~R~~V~   87 (124)
T 1v30_A           67 ETFERINEIEIGTGYRLVEVS   87 (124)
T ss_dssp             HHHHHHTTCGGGGGEEEEEEC
T ss_pred             HHHHHhhhccCCCCeEEEEEE
Confidence            9999999999  799999875

>1xhs_A Hypothetical UPF0131 protein YTFP; structure, autostructure, northeast structural genomics consortium, NESG, protein structure initiative, PSI; NMR {Escherichia coli} SCOP: d.269.1.1

Probab=97.33  E-value=0.00012  Score=56.35  Aligned_cols=88  Identities=16%  Similarity=0.185  Sum_probs=61.2

Q ss_pred             EEEeecccccccccCcCCCCcccceeeeecCceEeeccccchhhhccCCCCCCcceeeeeeeeCCCceEEEEEEeeeCCC
Q 027482           85 SISGFGSLLSENSARSTFPNLINFRVAKLRGFRRVFAHVAPIFFERGIAKPETKEISSLSVEPCEGETLIVTVFEIKKSE  164 (223)
Q Consensus        85 sifGYGSLVSe~SAR~tFPdL~nfR~ArL~GwRRvw~Hta~iFF~RGIA~~~treiAsLSVeP~~g~~Ivg~VfEVP~~d  164 (223)
                      .+|=||||++-....+--++-.-..+|.+.||+.....   .+       |        .+.|.+| .+.|.|++|+.++
T Consensus         2 ~vFvYGTL~~g~~~~~~l~~a~~~g~a~l~gy~L~~~g---~y-------P--------~lv~~~g-~V~Gevy~v~~~~   62 (121)
T 1xhs_A            2 RIFVYGSLRHKQGNSHWMTNAQLLGDFSIDNYQLYSLG---HY-------P--------GAVPGNG-TVHGEVYRIDNAT   62 (121)
T ss_dssp             EEEECSCTTCCCTTTHHHHTCEEEEEEEEEEEEEEECS---SS-------E--------EEEEEEE-EEEEEEEECCHHH
T ss_pred             EEEEECCCCCcccchhhcCCCcEEEEEEEeCcEEEEec---CC-------C--------eEEecCC-EEEEEEEEeCHHH
Confidence            57899999996543332122122356999999988542   11       1        1235566 8999999999999


Q ss_pred             hhhhhhcc---cceEeeeccccccCCCcCCCceEEEe
Q 027482          165 IPAFIKRE---HEFRFLAVLPETLDGKPFTNRAVLCA  198 (223)
Q Consensus       165 wpALdeRE---~eY~rlaV~~~~ldG~~~~~~AVlCa  198 (223)
                      |++||+=|   .+|+|..|..  .+|     +|++..
T Consensus        63 l~~LD~~Eg~~~~Y~R~~v~~--~~g-----~a~vY~   92 (121)
T 1xhs_A           63 LAELDALRTRGGEYARQLIQT--PYG-----SAWMYV   92 (121)
T ss_dssp             HHHHHHHHSTTSCEEEEEEEE--TTE-----EEEEEE
T ss_pred             HHHHHHhcCCCCCEEEEEEEc--CCC-----EEEEEE
Confidence            99999999   5899998873  233     677765

>3jud_A AIG2-like domain-containing protein 1; cyclotransferase, gamma-glutamylamine cyclotransferase, gamma-glutamyl-epsilon-lysine; 0.98A {Homo sapiens} SCOP: d.269.1.1 PDB: 3jub_A 3juc_A

Probab=96.19  E-value=0.0056  Score=49.09  Aligned_cols=47  Identities=13%  Similarity=0.109  Sum_probs=41.4

Q ss_pred             ceeeeeeeeCCCceEEEEEEeeeCCChhhhhhcc---cceEeeecccccc
Q 027482          139 EISSLSVEPCEGETLIVTVFEIKKSEIPAFIKRE---HEFRFLAVLPETL  185 (223)
Q Consensus       139 eiAsLSVeP~~g~~Ivg~VfEVP~~dwpALdeRE---~eY~rlaV~~~~l  185 (223)
                      .+.+|..+|.+|..+.|.|++|+.++|++||+.|   ..|+|..+....+
T Consensus        49 ~~P~l~~~p~~g~~V~G~ly~v~~~~l~~LD~~Eg~~~~Y~R~~v~V~~~   98 (153)
T 3jud_A           49 NIPWLLHLPGSGRLVEGEVYAVDERMLRFLDDFQSCPALYQRTVLRVQLL   98 (153)
T ss_dssp             TEEEEBSCTTSSBCCEEEEEEECHHHHHHHHHHTTTTTSCEEEEEEEEEE
T ss_pred             CCceEEecCCCCCEEEEEEEEECHHHHHHHHHhcCCCCceEEEEEEEEee
Confidence            4678888888899999999999999999999999   5999988877655

>1vkb_A Hypothetical protein; gamma-glutamyl cyclotransferase-like fold, structural genomi center for structural genomics, JCSG, protein structure INI PSI; 1.90A {Mus musculus} SCOP: d.269.1.1 PDB: 2kl2_A

Probab=96.01  E-value=0.0061  Score=49.03  Aligned_cols=45  Identities=16%  Similarity=0.195  Sum_probs=40.2

Q ss_pred             eeeeeeeeCCCceEEEEEEeeeCCChhhhhhcc---cceEeeeccccc
Q 027482          140 ISSLSVEPCEGETLIVTVFEIKKSEIPAFIKRE---HEFRFLAVLPET  184 (223)
Q Consensus       140 iAsLSVeP~~g~~Ivg~VfEVP~~dwpALdeRE---~eY~rlaV~~~~  184 (223)
                      +..++++|.+|..+.|.|++|+.+++++||+=|   ..|+|..|....
T Consensus        62 ~p~~~i~p~~g~~V~Gevy~v~~~~L~~LD~~Eg~p~~Y~R~~v~V~~  109 (161)
T 1vkb_A           62 IPWLLYLPGKGHCVTGEIYEVDEQMLRFLDDFEDCPSMYQRTALQVQV  109 (161)
T ss_dssp             EEEEESCTTSSBCCEEEEEEECHHHHHHHHHHTTTTTSCEEEEEEEEE
T ss_pred             cceeEeecCCCCEEEEEEEEECHHHHHHHHHhcCCCCceEEEEEEEEe
Confidence            566899999999999999999999999999999   589998887654

>2qik_A UPF0131 protein YKQA; NESG, SR631, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; HET: CIT; 1.35A {Bacillus subtilis}

Probab=83.58  E-value=1.6  Score=37.27  Aligned_cols=40  Identities=18%  Similarity=0.171  Sum_probs=30.0

Q ss_pred             eeeCCCceEEEEEEeeeCCChhhhhhcc---cceEeeeccccccCC
Q 027482          145 VEPCEGETLIVTVFEIKKSEIPAFIKRE---HEFRFLAVLPETLDG  187 (223)
Q Consensus       145 VeP~~g~~Ivg~VfEVP~~dwpALdeRE---~eY~rlaV~~~~ldG  187 (223)
                      ..|.+|..|.|.|++|+++   +||+=|   .+|+|..+.-...+|
T Consensus        48 ~~~~~~~~V~Gev~~v~~~---~LD~~E~~~~~Y~R~~v~v~~~~g   90 (285)
T 2qik_A           48 FNDEDEGYIYGEVYEADEL---CIHKLDQFFQGYHKQTVFVETDVG   90 (285)
T ss_dssp             CCTTCCSEEEEEEEEECHH---HHHHHHHHSTTCEEEEEEEEETTE
T ss_pred             EccCCCCEEEEEEEEcCHH---HhHHhcCCCCceeEEEEEEEcCCC
Confidence            3444688999999999654   888888   599999866544444

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	223
d1vkba_	151	Hypothetical protein LOC223267 {Mouse (Mus musculu	97.12
d1xhsa_	113	Hypothetical protein YtfP {Escherichia coli [TaxId	96.41
d1v30a_	118	Hypothetical protein PH0828 {Pyrococcus horikoshii	95.37

>d1vkba_ d.269.1.1 (A:) Hypothetical protein LOC223267 {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Gamma-glutamyl cyclotransferase-like
superfamily: Gamma-glutamyl cyclotransferase-like
family: Gamma-glutamyl cyclotransferase-like
domain: Hypothetical protein LOC223267
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.12  E-value=6.4e-05  Score=57.41  Aligned_cols=89  Identities=15%  Similarity=0.214  Sum_probs=56.2

Q ss_pred             EEEeecccccccccCcCCCCccc--ceeeeecCceEeeccccchhhhccCCCCCCcceeeeeeeeCCCceEEEEEEeeeC
Q 027482           85 SISGFGSLLSENSARSTFPNLIN--FRVAKLRGFRRVFAHVAPIFFERGIAKPETKEISSLSVEPCEGETLIVTVFEIKK  162 (223)
Q Consensus        85 sifGYGSLVSe~SAR~tFPdL~n--fR~ArL~GwRRvw~Hta~iFF~RGIA~~~treiAsLSVeP~~g~~Ivg~VfEVP~  162 (223)
                      -+|-||||..-...-..   |..  ...|++.|..+.+..-..+       +........|..++..|..+.|.|++|..
T Consensus         5 ~lFvYGTL~~g~~n~~~---l~~~~~~~a~~~g~~~t~~~~~l~-------~~g~~~yP~l~~~~~~~~~V~G~l~~v~~   74 (151)
T d1vkba_           5 HIFVYGTLKRGQPNHKV---MLDHSHGLAAFRGRGCTVESFPLV-------IAGEHNIPWLLYLPGKGHCVTGEIYEVDE   74 (151)
T ss_dssp             EEEECSTTSTTSTTTHH---HHCGGGCCEEEEEEEEESSCBCEE-------EETTTTEEEEESCTTSSBCCEEEEEEECH
T ss_pred             EEEEEcCCCCCCcChHH---HhccccCcceEEEEEEEccceeEE-------EeCCCCcCEEEeeCCCCcEEEEEEEEcCH
Confidence            48999999754321111   111  1124444444433221110       01123456677778888999999999999


Q ss_pred             CChhhhhhcc---cceEeeecccc
Q 027482          163 SEIPAFIKRE---HEFRFLAVLPE  183 (223)
Q Consensus       163 ~dwpALdeRE---~eY~rlaV~~~  183 (223)
                      ++|++||+.|   ..|+|..|...
T Consensus        75 ~~l~~LD~~Eg~~~~Y~R~~v~V~   98 (151)
T d1vkba_          75 QMLRFLDDFEDCPSMYQRTALQVQ   98 (151)
T ss_dssp             HHHHHHHHHTTTTTSCEEEEEEEE
T ss_pred             HHHHhhHHhcCCCCceEEEEEEEE
Confidence            9999999999   68999777664

>d1xhsa_ d.269.1.1 (A:) Hypothetical protein YtfP {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a+b)
fold: Gamma-glutamyl cyclotransferase-like
superfamily: Gamma-glutamyl cyclotransferase-like
family: Gamma-glutamyl cyclotransferase-like
domain: Hypothetical protein YtfP
species: Escherichia coli [TaxId: 562]

Probab=96.41  E-value=0.0007  Score=49.05  Aligned_cols=79  Identities=14%  Similarity=0.126  Sum_probs=54.6

Q ss_pred             EEEeecccccccccCcCCCCcccceeeeecCceEeeccccchhhhccCCCCCCcceeeeeeeeCCCceEEEEEEeeeCCC
Q 027482           85 SISGFGSLLSENSARSTFPNLINFRVAKLRGFRRVFAHVAPIFFERGIAKPETKEISSLSVEPCEGETLIVTVFEIKKSE  164 (223)
Q Consensus        85 sifGYGSLVSe~SAR~tFPdL~nfR~ArL~GwRRvw~Hta~iFF~RGIA~~~treiAsLSVeP~~g~~Ivg~VfEVP~~d  164 (223)
                      -+|=||||++....-+-.++-.-...|.+.||+......                  +=.+.|.+| .+.|.|++|+.++
T Consensus         2 ~lFvYGTL~~g~~~~~~l~~~~~~~~~~~~g~~l~~~~~------------------yP~lv~~~~-~V~Gely~v~~~~   62 (113)
T d1xhsa_           2 RIFVYGSLRHKQGNSHWMTNAQLLGDFSIDNYQLYSLGH------------------YPGAVPGNG-TVHGEVYRIDNAT   62 (113)
T ss_dssp             EEEECSCTTCCCTTTHHHHTCEEEEEEEEEEEEEEECSS------------------SEEEEEEEE-EEEEEEEECCHHH
T ss_pred             EEEEEcCCCCCCcChhhhCCCcEEeEEEEeeeEEeccCC------------------CCEEEeCCC-cEEEEEEEECHHH
Confidence            478899999875432222221224578899987654311                  112456666 6899999999999


Q ss_pred             hhhhhhccc---ceEeeeccc
Q 027482          165 IPAFIKREH---EFRFLAVLP  182 (223)
Q Consensus       165 wpALdeRE~---eY~rlaV~~  182 (223)
                      |.+||+=|-   .|.|..|.-
T Consensus        63 l~~LD~~Eg~~~~Y~R~~v~v   83 (113)
T d1xhsa_          63 LAELDALRTRGGEYARQLIQT   83 (113)
T ss_dssp             HHHHHHHHSTTSCEEEEEEEE
T ss_pred             HHHhhcccCCCCcEEEEEEEE
Confidence            999999995   499988765

>d1v30a_ d.269.1.1 (A:) Hypothetical protein PH0828 {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a+b)
fold: Gamma-glutamyl cyclotransferase-like
superfamily: Gamma-glutamyl cyclotransferase-like
family: Gamma-glutamyl cyclotransferase-like
domain: Hypothetical protein PH0828
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=95.37  E-value=0.012  Score=43.48  Aligned_cols=80  Identities=18%  Similarity=0.271  Sum_probs=53.7

Q ss_pred             EEEEeecccccccccCcCCCCcccceeeeecCceEeeccccchhhhccCCCCCCcceeeeeeeeCCCceEEEEEEeeeCC
Q 027482           84 ISISGFGSLLSENSARSTFPNLINFRVAKLRGFRRVFAHVAPIFFERGIAKPETKEISSLSVEPCEGETLIVTVFEIKKS  163 (223)
Q Consensus        84 IsifGYGSLVSe~SAR~tFPdL~nfR~ArL~GwRRvw~Hta~iFF~RGIA~~~treiAsLSVeP~~g~~Ivg~VfEVP~~  163 (223)
                      |-||=||+|+.....-+--.+-.-.-+|.+.||......-+                   .+.|.+| .+.|.|++|+++
T Consensus         2 ~rvFVYGTL~~g~~n~~~l~~~~~i~~a~~~g~~~~~~~yP-------------------~~v~~~g-~V~Gevy~v~~~   61 (118)
T d1v30a_           2 VRIAVYGTLRKGKPLHWYLKGAKFLGEDWIEGYQLYFEYLP-------------------YAVKGKG-KLKVEVYEVDKE   61 (118)
T ss_dssp             EEEEECSTTSTTSTTGGGGTTSEEEEEEEEEEEEEEESSSE-------------------EEEEEEE-EEEEEEEEECHH
T ss_pred             cEEEEECCCCCCCCChHHhCCCcEEEEEEEeeeEeecCCCC-------------------EEEeCCC-CEEEEEEEECHH
Confidence            56899999987654333211111123788888876532111                   2344455 589999999999


Q ss_pred             Chhhhhhccc--ceEeeecccc
Q 027482          164 EIPAFIKREH--EFRFLAVLPE  183 (223)
Q Consensus       164 dwpALdeRE~--eY~rlaV~~~  183 (223)
                      .|+.||+=|-  +|.|+.|..+
T Consensus        62 ~l~~LD~~Eg~~~Y~R~~v~~~   83 (118)
T d1v30a_          62 TFERINEIEIGTGYRLVEVSTK   83 (118)
T ss_dssp             HHHHHTTCGGGGGEEEEEECCT
T ss_pred             HHHhhccccCCCCeEEEEEEcc
Confidence            9999999995  6999887653