Citrus Sinensis ID: 027502

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220--
Protein Sequence
MNRYSVIVLSVLVCGFIELGLCREGNFIQMRPGGVYDYGGNQNSAEIEGLARFAVQEHNKKENALLQFARVLKAKEQVVAGKLYYLTLEVIDAGKNKIYEAKIWVKPWINFKQLQEFKHAEHGPFSALSDLNLKRGCHGQEWLAVSTNDLEVKNAANHAVKSMQRKSNSLFLYELLEILQAKAKVIEDYAKFELHLKLRRGSEEEKHWVEIIKNSEGKFYLK
Secondary Structure (PSIPRED)
ccccHHHHHHHHHHHHHHHHHcccccccccccccEEEcccccccHHHHHHHHHHHHHHHHcccccEEEEEEEEEEEEEEccEEEEEEEEEEcccccEEEEEEEEEEEcccccEEEEEEcccccccccccccccccccccccEEEEccccHHHHHHHHHHHHHHHHHccccccEEEEEEEEEEEEEEEcEEEEEEEEEEcccccEEEEEEEEEEccccEEEEc
Secondary Structure Prediction (SSPRO)
cccHHHHHHEHEEHEHHHHHHccccccccEEEccEEccccccccHHHHHHHHHHHHHHHHHccccEEEEEEEEEEEEEEEcEEEEEEEEEEcccccEEEEEEEEEEccHcccEEEEEcccccccccccccccccccccccccEEcccccHHHHHHHHHHHHHHHHHccccccEEEEEEEEcEHHHHcccEEEEEEEEccccccEEEEEEEEEEccccEEEEc
Coil and Loop (DISEMBL)
MNRYSVIVLSVLVCGFielglcregnfiqmrpggvydyggnqnsAEIEGLARFAVQEHNKKENALLQFARVLKAKEQVVAGKLYYLTLEVIDAGKNKIYEAKIwvkpwinfkqlqefkhaehgpfsalsdlnlkrgchgqeWLAVSTNDLEVKNAANHAVKSMQRKSNSLFLYELLEILQAKAKVIEDYAKFELHLKLRRGSEEEKHWVEIIKNsegkfylk
Flexible Loop (DISEMBL)
MNRYSVIVLSVLVCGFIELGLCREGNFIQMRPGGVYDYGGNQNSAEIEGLARFAVQEHNKKENALLQFARVLKAKEQVVAGKLYYLTLEVIDAGKNKIYEAKIWVKPWINFKQLQEFKHAEHGPFSALSDLNLKRGCHGQEWLAVSTNDLEVKNAANHAVKSMQRKSNSLFLYELLEILQAKAKVIEDYAKFELHLklrrgseeekhwveiiknsegkfylk
Low Complexity Region (SEG)
MNRYSVIVLSVLVCGFIELGLCREGNFIQMRPGGVYDYGGNQNSAEIEGLARFAVQEHNKKENALLQFARVLKAKEQVVAGKLYYLTLEVIDAGKNKIYEAKIWVKPWINFKQLQEFKHAEHGPFSALSDLNLKRGCHGQEWLAVSTNDLEVKNAANHAVKSMQRKSNSLFLYELLEILQAKAKVIEDYAKFELHLKLRRGSEEEKHWVEIIKNSEGKFYLK
Disordered region (IsUnstruct)
***YSVIVLSVLVCGFIELGLCREGNFIQMRPGGVYDYGGNQNSAEIEGLARFAVQEHNKKENALLQFARVLKAKEQVVAGKLYYLTLEVIDAGKNKIYEAKIWVKPWINFKQLQEFKHAEHGPFSALSDLNLKRGCHGQEWLAVSTNDLEVKNAANHAV******SNSLFLYELLEILQAKAKVIEDYAKFELHLKLRRGSEEEKHWVEIIK*********
Disordered Region (DISOPRED)
**RYSVIVLSVLVCGFIELGLCREGNFIQMRPGGVYDYGGNQNSAEIEGLARFAVQEHNKKENALLQFARVLKAKEQVVAGKLYYLTLEVIDAGKNKIYEAKIWVKPWINFKQLQEFKH**********************WLAVSTNDLEVKNAANHAV************YELLEILQAKAKVIEDYAKFELHLKLRRGSEEEKHWVEIIKNS***F***
Disordered Region (DISEMBL)
MNRYSVIVLSVLVCGFIELGLCREGNFIQMRPGGVYDYGGNQNSAEIEGLARFAVQEHNKKENALLQFARVLKAKEQVVAGKLYYLTLEVIDAGKNKIYEAKIWVKPWINFKQLQEFKHAEHGPFSALSDLNLKRGCHGQEWLAVSTNDLEVKNAANHAVKSMQRKSNSLFLYELLEILQAKAKVIEDYAKFELHLKLRRGSEEEKHWVEIIKNSEGKFYLK
Disordered Region (DISPRO)
*NRYSVIVLSVLVCGFIELGLCREGNFIQMRPGGVYDYGGNQNSAEIEGLARFAVQEHNKKENALLQFARVLKAKEQVVAGKLYYLTLEVIDAGKNKIYEAKIWVKPWINFKQLQEFKHAEH******SDLNL*****GQEWLAVSTNDLEVKNAANHAVKSMQRKSNSLFLYELLEILQAKAKVIEDYAKFELHLKLRRGSEEEKHWVEIIKNSEGKFYLK
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
SSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
SSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MNRYSVIVLSVLVCGFIELGLCREGNFIQMRPGGVYDYGGNQNSAEIEGLARFAVQEHNKKENALLQFARVLKAKEQVVAGKLYYLTLEVIDAGKNKIYEAKIWVKPWINFKQLQEFKHAEHGPFSALSDLNLKRGCHGQEWLAVSTNDLEVKNAANHAVKSMQRKSNSLFLYELLEILQAKAKVIEDYAKFELHLKLRRGSEEEKHWVEIIKNSEGKFYLK
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	222	2.2.26 [Sep-21-2011]
Q8H0X6	234	Cysteine proteinase inhib	yes	no	0.945	0.897	0.562	2e-60
Q8LC76	232	Cysteine proteinase inhib	no	no	0.954	0.913	0.542	2e-58
Q0JNR2	250	Cysteine proteinase inhib	yes	no	0.851	0.756	0.566	6e-58
Q41906	125	Cysteine proteinase inhib	no	no	0.540	0.96	0.528	7e-34
Q06445	97	Cysteine proteinase inhib	N/A	no	0.414	0.948	0.641	5e-30
P31726	135	Cystatin-1 OS=Zea mays GN	N/A	no	0.423	0.696	0.595	5e-26
Q10992	82	Cysteine proteinase inhib	N/A	no	0.351	0.951	0.666	2e-24
P09229	140	Cysteine proteinase inhib	no	no	0.382	0.607	0.569	1e-21
P37842	756	Multicystatin OS=Solanum	N/A	no	0.581	0.170	0.431	1e-21
Q945Q1	101	Cysteine proteinase inhib	no	no	0.391	0.861	0.551	2e-21

>sp|Q8H0X6|CYT6_ARATH Cysteine proteinase inhibitor 6 OS=Arabidopsis thaliana GN=CYS6 PE=1 SV=2

 Score =  231 bits (590), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 121/215 (56%), Positives = 155/215 (72%), Gaps = 5/215 (2%)

Query: 9   LSVLVCGFI--ELGLCREGNFIQMRPGGVYDYGGNQNSAEIEGLARFAVQEHNKKENALL 66
           LS+ +   I  +LG C E   +    GGV D   NQNS E+E LARFAV EHNKKENALL
Sbjct: 15  LSLFISSLIASDLGFCNEEMALV---GGVGDVPANQNSGEVESLARFAVDEHNKKENALL 71

Query: 67  QFARVLKAKEQVVAGKLYYLTLEVIDAGKNKIYEAKIWVKPWINFKQLQEFKHAEHGPFS 126
           +FARV+KAKEQVVAG L++LTLE+++AG+ K+YEAK+WVKPW+NFK+LQEFK A   P  
Sbjct: 72  EFARVVKAKEQVVAGTLHHLTLEILEAGQKKLYEAKVWVKPWLNFKELQEFKPASDAPAI 131

Query: 127 ALSDLNLKRGCHGQEWLAVSTNDLEVKNAANHAVKSMQRKSNSLFLYELLEILQAKAKVI 186
             SDL  K+G H   W  V  +D EVK+ A  AVK++Q++SNSLF YELLE++ AKA+V 
Sbjct: 132 TSSDLGCKQGEHESGWREVPGDDPEVKHVAEQAVKTIQQRSNSLFPYELLEVVHAKAEVT 191

Query: 187 EDYAKFELHLKLRRGSEEEKHWVEIIKNSEGKFYL 221
            + AK+ + LKL+RG +EEK  VE+ KN EG  +L
Sbjct: 192 GEAAKYNMLLKLKRGEKEEKFKVEVHKNHEGALHL 226

Specific inhibitor of cysteine proteinases. Probably involved in the regulation of endogenous processes and in defense against pests and pathogens.
Arabidopsis thaliana (taxid: 3702)

>sp|Q8LC76|CYT7_ARATH Cysteine proteinase inhibitor 7 OS=Arabidopsis thaliana GN=CYS7 PE=2 SV=2

 Score =  225 bits (573), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 120/221 (54%), Positives = 161/221 (72%), Gaps = 9/221 (4%)

Query: 6   VIVLSVLVCGFIELGLCRE------GNFIQMRPGGVYDYGGNQNSA-EIEGLARFAVQEH 58
           + V  VL+ GF +  +C E       N ++M+ GG  D   + N   EI+ +A FAVQEH
Sbjct: 13  ICVSLVLLSGFGQFVICSEEKGTYNDNVVKMKLGGFSDSKNDWNGGKEIDDIALFAVQEH 72

Query: 59  NKKENALLQFARVLKAKEQVVAGKLYYLTLEVIDAGKNKIYEAKIWVKPWINFKQLQEFK 118
           N++ENA+L+ ARVLKA EQVVAGKLY LTLEVI+AG+ KIYEAK+WVKPW+NFKQLQEFK
Sbjct: 73  NRRENAVLELARVLKATEQVVAGKLYRLTLEVIEAGEKKIYEAKVWVKPWMNFKQLQEFK 132

Query: 119 HAEHGPFSALSDLNLKRGCHGQEWLAVSTNDLEVKNAANHAVKSMQRKSNSLFLYELLEI 178
           +    P   +SDL  K   +G +W +VSTN+ EV+ AA HA+KS+Q+KSNSLF Y+L++I
Sbjct: 133 NI--IPSFTISDLGFKPDGNGFDWRSVSTNNPEVQEAAKHAMKSLQQKSNSLFPYKLIDI 190

Query: 179 LQAKAKVIEDYAKFELHLKLRRGSEEEKHWVEIIKNSEGKF 219
           + A+AKV+E+  KFEL LKL RG++ EK  VE++K+  GK+
Sbjct: 191 ILARAKVVEERVKFELLLKLERGNKLEKFMVEVMKDQTGKY 231

Specific inhibitor of cysteine proteinases. Probably involved in the regulation of endogenous processes and in defense against pests and pathogens.

Arabidopsis thaliana (taxid: 3702)

>sp|Q0JNR2|CYT12_ORYSJ Cysteine proteinase inhibitor 12 OS=Oryza sativa subsp. japonica GN=Os01g0270100 PE=2 SV=1

 Score =  223 bits (569), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 107/189 (56%), Positives = 145/189 (76%)

Query: 33  GGVYDYGGNQNSAEIEGLARFAVQEHNKKENALLQFARVLKAKEQVVAGKLYYLTLEVID 92
           GG +D     NS E + LARFAV EHNK+ENALL+F RV++AKEQVVAG L++LTLE ++
Sbjct: 49  GGAHDAPSAANSVETDALARFAVDEHNKRENALLEFVRVVEAKEQVVAGTLHHLTLEALE 108

Query: 93  AGKNKIYEAKIWVKPWINFKQLQEFKHAEHGPFSALSDLNLKRGCHGQEWLAVSTNDLEV 152
           AG+ K+YEAK+WVKPW++FK+LQEF++         +DL  K+G H   W  V  +D  V
Sbjct: 109 AGRKKVYEAKVWVKPWLDFKELQEFRNTGDATTFTNADLGAKKGGHEPGWRDVPVHDPVV 168

Query: 153 KNAANHAVKSMQRKSNSLFLYELLEILQAKAKVIEDYAKFELHLKLRRGSEEEKHWVEII 212
           K+AA+HAVKS+Q++SNSLF YELLEI++AKA+V+ED+AKF++ +KL+RG++EEK   E+ 
Sbjct: 169 KDAADHAVKSIQQRSNSLFPYELLEIVRAKAEVVEDFAKFDILMKLKRGNKEEKFKAEVH 228

Query: 213 KNSEGKFYL 221
           KN EG F L
Sbjct: 229 KNLEGAFVL 237

Specific inhibitor of cysteine proteinases. Probably involved in the regulation of endogenous processes and in defense against pests and pathogens.

Oryza sativa subsp. japonica (taxid: 39947)

>sp|Q41906|CYT3_ARATH Cysteine proteinase inhibitor 3 OS=Arabidopsis thaliana GN=CYS3 PE=2 SV=2

 Score =  144 bits (362), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 65/123 (52%), Positives = 92/123 (74%), Gaps = 3/123 (2%)

Query: 1   MNRYSVIVLSVLVCGFIELGLCR---EGNFIQMRPGGVYDYGGNQNSAEIEGLARFAVQE 57
           M   +  ++++L+CG I+L +CR   +     M  GGV+D  GNQNS EIE LARFA+QE
Sbjct: 1   MESKTFWIVTLLLCGTIQLAICRSEEKSTEKTMMLGGVHDLRGNQNSGEIESLARFAIQE 60

Query: 58  HNKKENALLQFARVLKAKEQVVAGKLYYLTLEVIDAGKNKIYEAKIWVKPWINFKQLQEF 117
           HNK++N +L+F +++KA+EQVVAG +Y+LTLE  +  + K +EAK+WVKPW+NFKQLQEF
Sbjct: 61  HNKQQNKILEFKKIVKAREQVVAGTMYHLTLEAKEGDQTKNFEAKVWVKPWMNFKQLQEF 120

Query: 118 KHA 120
           K +
Sbjct: 121 KES 123

Specific inhibitor of cysteine proteinases. Probably involved in the regulation of endogenous processes and in defense against pests and pathogens.

Arabidopsis thaliana (taxid: 3702)

>sp|Q06445|CYTI_VIGUN Cysteine proteinase inhibitor OS=Vigna unguiculata PE=3 SV=1

 Score =  131 bits (329), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 59/92 (64%), Positives = 73/92 (79%)

Query: 33  GGVYDYGGNQNSAEIEGLARFAVQEHNKKENALLQFARVLKAKEQVVAGKLYYLTLEVID 92
           GG  D  GNQNS EI+ LARFAV+EHNKK+NALL+F RV+ A++QVV+G LY +TLE  D
Sbjct: 5   GGNRDVAGNQNSLEIDSLARFAVEEHNKKQNALLEFGRVVSAQQQVVSGTLYTITLEAKD 64

Query: 93  AGKNKIYEAKIWVKPWINFKQLQEFKHAEHGP 124
            G+ K+YEAK+W KPW+NFK+LQEFKH    P
Sbjct: 65  GGQKKVYEAKVWEKPWLNFKELQEFKHVGDAP 96

Vigna unguiculata (taxid: 3917)

>sp|P31726|CYT1_MAIZE Cystatin-1 OS=Zea mays GN=RAMDAZC7 PE=2 SV=1

 Score =  117 bits (293), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 56/94 (59%), Positives = 69/94 (73%)

Query: 30  MRPGGVYDYGGNQNSAEIEGLARFAVQEHNKKENALLQFARVLKAKEQVVAGKLYYLTLE 89
           M  GG+ D   N+N  +++ LARFAV EHN+K NALL F +++KAK QVVAG +YYLT+E
Sbjct: 39  MLAGGIKDVPANENDLQLQELARFAVNEHNQKANALLGFEKLVKAKTQVVAGTMYYLTIE 98

Query: 90  VIDAGKNKIYEAKIWVKPWINFKQLQEFKHAEHG 123
           V D    K+YEAK+W KPW NFKQLQEFK  E G
Sbjct: 99  VKDGEVKKLYEAKVWEKPWENFKQLQEFKPVEEG 132

Zea mays (taxid: 4577)

>sp|Q10992|CYTA_HELAN Cysteine proteinase inhibitor A OS=Helianthus annuus PE=1 SV=1

 Score =  112 bits (279), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 52/78 (66%), Positives = 63/78 (80%)

Query: 44  SAEIEGLARFAVQEHNKKENALLQFARVLKAKEQVVAGKLYYLTLEVIDAGKNKIYEAKI 103
           S EI+ LARFAV EHNKK+NALL+F +V+  KEQVVAGK+YY+TLE  + G  K YEAK+
Sbjct: 1   SLEIDELARFAVDEHNKKQNALLEFGKVVNTKEQVVAGKMYYITLEATNGGVKKTYEAKV 60

Query: 104 WVKPWINFKQLQEFKHAE 121
           WVKPW NFK+LQEFK  +
Sbjct: 61  WVKPWENFKELQEFKPVD 78

Strong inhibitor of papain and ficin but poor inhibitor of cathepsin H, B and L.

Helianthus annuus (taxid: 4232)

>sp|P09229|CYT1_ORYSJ Cysteine proteinase inhibitor 1 OS=Oryza sativa subsp. japonica GN=Os01g0803200 PE=1 SV=2

 Score =  103 bits (257), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 49/86 (56%), Positives = 64/86 (74%), Gaps = 1/86 (1%)

Query: 33  GGVYDYGGNQNSAEIEGLARFAVQEHNKKENALLQFARVLKAKEQVVAGKLYYLTLEVID 92
           GGV   G N+N   +  LARFAV EHNKK N+LL+F +++  K+QVVAG LYY T+EV +
Sbjct: 48  GGVEPVG-NENDLHLVDLARFAVTEHNKKANSLLEFEKLVSVKQQVVAGTLYYFTIEVKE 106

Query: 93  AGKNKIYEAKIWVKPWINFKQLQEFK 118
               K+YEAK+W KPW++FK+LQEFK
Sbjct: 107 GDAKKLYEAKVWEKPWMDFKELQEFK 132

There are two distinct cystatins in rice seeds (Oryzacystatin-1 and -2) with different specificities against cysteine proteinases. May be involved in the control of germination by inhibition of endogenous cysteine proteinases. May play a role in defense by inhibiting exogenous proteases such as those present in digestive tracks of insects and nematodes.

Oryza sativa subsp. japonica (taxid: 39947)

>sp|P37842|CYTM_SOLTU Multicystatin OS=Solanum tuberosum PE=1 SV=1

 Score =  102 bits (255), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 63/146 (43%), Positives = 85/146 (58%), Gaps = 17/146 (11%)

Query: 43  NSAEIEGLARFAVQEHNKKENALLQFARVLKAKEQVVAGKLYYLTLEVIDAGKNKIYEAK 102
           N+ E + LARFAVQ++NKKENA L+F   L  KEQ+VAG LYY+TL  IDAGK KIYEAK
Sbjct: 486 NNPEFQDLARFAVQDYNKKENAHLEFVENLNVKEQLVAGMLYYITLVAIDAGKKKIYEAK 545

Query: 103 IWVKPWINFKQLQEFK--HAEHGPFSALSDLNLKRGCHGQEWLAVSTNDLEVKNAANHAV 160
           IWVK W NFK++ EFK    +       +D+                N+ E ++ A  AV
Sbjct: 546 IWVKEWENFKKVIEFKLIGDDSAIIGGFTDVPF-------------PNNPEFQDLARFAV 592

Query: 161 KSMQRKSNSLFLYELLEILQAKAKVI 186
           +   +K N+   Y  +E L  K +++
Sbjct: 593 QDYNKKENAHLEY--VENLNVKEQLV 616

Probably has a role in the plant's defense system.

Solanum tuberosum (taxid: 4113)

>sp|Q945Q1|CYT1_ARATH Cysteine proteinase inhibitor 1 OS=Arabidopsis thaliana GN=CYS1 PE=1 SV=2

 Score =  102 bits (255), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 48/87 (55%), Positives = 60/87 (68%)

Query: 33  GGVYDYGGNQNSAEIEGLARFAVQEHNKKENALLQFARVLKAKEQVVAGKLYYLTLEVID 92
           GGV D   N N  ++E LARFAV EHNK EN  L++ R+L AK QVVAG +++LT+EV D
Sbjct: 11  GGVRDIDANANDLQVESLARFAVDEHNKNENLTLEYKRLLGAKTQVVAGTMHHLTVEVAD 70

Query: 93  AGKNKIYEAKIWVKPWINFKQLQEFKH 119
              NK+YEAK+  K W N KQL+ F H
Sbjct: 71  GETNKVYEAKVLEKAWENLKQLESFNH 97

Involved in suppression of hypersensitive cell death activated by either avirulent pathogen or oxidative stress.

Arabidopsis thaliana (taxid: 3702)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	222
224144030	193	predicted protein [Populus trichocarpa]	0.851	0.979	0.703	6e-69
225440171	234	PREDICTED: cysteine proteinase inhibitor	0.909	0.863	0.661	7e-69
290578593	234	cystatin [Vitis cinerea var. helleri x V	0.909	0.863	0.657	3e-68
297741695	201	unnamed protein product [Vitis vinifera]	0.842	0.930	0.695	3e-65
225464047	201	PREDICTED: cysteine proteinase inhibitor	0.851	0.940	0.619	2e-61
224073041	235	predicted protein [Populus trichocarpa]	0.977	0.923	0.531	4e-60
1638842	209	cysteine proteinase inhibitor [Ricinus c	0.846	0.899	0.590	5e-60
255569167	238	cysteine protease inhibitor, putative [R	0.846	0.789	0.590	6e-60
192910880	204	cysteine proteinase inhibitor [Elaeis gu	0.851	0.926	0.640	1e-59
224057220	200	predicted protein [Populus trichocarpa]	0.851	0.945	0.603	1e-59

>gi|224144030|ref|XP_002336103.1| predicted protein [Populus trichocarpa] gi|222872395|gb|EEF09526.1| predicted protein [Populus trichocarpa]

 Score =  266 bits (679), Expect = 6e-69,   Method: Compositional matrix adjust.
 Identities = 135/192 (70%), Positives = 157/192 (81%), Gaps = 3/192 (1%)

Query: 30  MRPGGVYDYGGNQNSAEIEGLARFAVQEHNKKENALLQFARVLKAKEQVVAGKLYYLTLE 89
           M+ GGV+D  G+QNSAEI+ LARFAVQEHNKKENA+L+F RVLKAKEQVVAGKLY+LT+E
Sbjct: 1   MKLGGVHDCKGSQNSAEIDSLARFAVQEHNKKENAILEFVRVLKAKEQVVAGKLYHLTVE 60

Query: 90  VIDAGKNKIYEAKIWVKPWINFKQLQEFKHAEHGPFSALSDLNLKRGCHGQEWLAVSTND 149
             DAG NK+YE K+WVKPW+NFKQLQEFKH E G     SDL +K   HG  W  V TND
Sbjct: 61  ATDAGNNKMYEVKVWVKPWMNFKQLQEFKHVEGG---TSSDLGVKPDDHGSGWQPVPTND 117

Query: 150 LEVKNAANHAVKSMQRKSNSLFLYELLEILQAKAKVIEDYAKFELHLKLRRGSEEEKHWV 209
           LEV++AANHAVKS+Q++SNSL  YEL+EIL AKAKVIEDYAKF L LKLRRG +EE   V
Sbjct: 118 LEVQDAANHAVKSIQKRSNSLSPYELVEILLAKAKVIEDYAKFNLLLKLRRGIKEENFKV 177

Query: 210 EIIKNSEGKFYL 221
           E+IKN EGKF++
Sbjct: 178 EVIKNMEGKFHV 189

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225440171|ref|XP_002283400.1| PREDICTED: cysteine proteinase inhibitor 12-like [Vitis vinifera]

 Score =  266 bits (679), Expect = 7e-69,   Method: Compositional matrix adjust.
 Identities = 137/207 (66%), Positives = 163/207 (78%), Gaps = 5/207 (2%)

Query: 18  ELGLCREGNFIQMRP-----GGVYDYGGNQNSAEIEGLARFAVQEHNKKENALLQFARVL 72
           ++G CRE +FI+M       GGV D GG QNSAEIE +ARFAVQEHNK +NALL+FA+VL
Sbjct: 18  QIGFCREDSFIRMPKTMNLLGGVRDCGGIQNSAEIESIARFAVQEHNKNQNALLEFAKVL 77

Query: 73  KAKEQVVAGKLYYLTLEVIDAGKNKIYEAKIWVKPWINFKQLQEFKHAEHGPFSALSDLN 132
           KAKEQVVAGK+YYLTLE IDAGK KIYEAK+WVKPW+NFK+LQEFKH++     A SDL 
Sbjct: 78  KAKEQVVAGKIYYLTLEAIDAGKKKIYEAKVWVKPWMNFKELQEFKHSQETKSFAPSDLG 137

Query: 133 LKRGCHGQEWLAVSTNDLEVKNAANHAVKSMQRKSNSLFLYELLEILQAKAKVIEDYAKF 192
           +K+  HG EW  V TND EV++AANH VKS+Q +SNS+F YELLEIL AKAKVIE  AKF
Sbjct: 138 VKQDGHGSEWQVVPTNDPEVQDAANHVVKSIQMRSNSIFRYELLEILLAKAKVIEGSAKF 197

Query: 193 ELHLKLRRGSEEEKHWVEIIKNSEGKF 219
           +L LKL+ GS++ K   E+ KN EGKF
Sbjct: 198 DLLLKLKWGSKDVKFKAEVNKNIEGKF 224

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|290578593|gb|ADD51191.1| cystatin [Vitis cinerea var. helleri x Vitis riparia]

 Score =  263 bits (672), Expect = 3e-68,   Method: Compositional matrix adjust.
 Identities = 136/207 (65%), Positives = 161/207 (77%), Gaps = 5/207 (2%)

Query: 18  ELGLCREGNFIQMRP-----GGVYDYGGNQNSAEIEGLARFAVQEHNKKENALLQFARVL 72
           ++G CRE +FI+M       GGV D GG QNSAEIE +ARFAVQEHNK +NALL+FA+VL
Sbjct: 18  QIGFCREDSFIRMPKTMNLLGGVRDCGGIQNSAEIESIARFAVQEHNKNQNALLEFAKVL 77

Query: 73  KAKEQVVAGKLYYLTLEVIDAGKNKIYEAKIWVKPWINFKQLQEFKHAEHGPFSALSDLN 132
           KAKEQVVA K+YYLTLE IDAGK KIYEAK+WVKPW+NFK+LQEFKHA+       SDL 
Sbjct: 78  KAKEQVVASKIYYLTLEAIDAGKKKIYEAKVWVKPWMNFKELQEFKHAQETKSFTSSDLG 137

Query: 133 LKRGCHGQEWLAVSTNDLEVKNAANHAVKSMQRKSNSLFLYELLEILQAKAKVIEDYAKF 192
           +K+  HG EW  V TND EV++AANH VKS+Q +SNS+F YELLEIL AKAKVIE  AKF
Sbjct: 138 VKQDGHGSEWQVVPTNDPEVQDAANHVVKSIQMRSNSIFRYELLEILLAKAKVIEGSAKF 197

Query: 193 ELHLKLRRGSEEEKHWVEIIKNSEGKF 219
           +L LKL+ GS++ K   E+ KN EGKF
Sbjct: 198 DLLLKLKWGSKDVKFKAEVNKNIEGKF 224

Source: Vitis cinerea var. helleri x Vitis riparia

Species: Vitis cinerea var. helleri x Vitis riparia

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297741695|emb|CBI32827.3| unnamed protein product [Vitis vinifera]

 Score =  253 bits (647), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 130/187 (69%), Positives = 152/187 (81%)

Query: 33  GGVYDYGGNQNSAEIEGLARFAVQEHNKKENALLQFARVLKAKEQVVAGKLYYLTLEVID 92
           GGV D GG QNSAEIE +ARFAVQEHNK +NALL+FA+VLKAKEQVVAGK+YYLTLE ID
Sbjct: 5   GGVRDCGGIQNSAEIESIARFAVQEHNKNQNALLEFAKVLKAKEQVVAGKIYYLTLEAID 64

Query: 93  AGKNKIYEAKIWVKPWINFKQLQEFKHAEHGPFSALSDLNLKRGCHGQEWLAVSTNDLEV 152
           AGK KIYEAK+WVKPW+NFK+LQEFKH++     A SDL +K+  HG EW  V TND EV
Sbjct: 65  AGKKKIYEAKVWVKPWMNFKELQEFKHSQETKSFAPSDLGVKQDGHGSEWQVVPTNDPEV 124

Query: 153 KNAANHAVKSMQRKSNSLFLYELLEILQAKAKVIEDYAKFELHLKLRRGSEEEKHWVEII 212
           ++AANH VKS+Q +SNS+F YELLEIL AKAKVIE  AKF+L LKL+ GS++ K   E+ 
Sbjct: 125 QDAANHVVKSIQMRSNSIFRYELLEILLAKAKVIEGSAKFDLLLKLKWGSKDVKFKAEVN 184

Query: 213 KNSEGKF 219
           KN EGKF
Sbjct: 185 KNIEGKF 191

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225464047|ref|XP_002267841.1| PREDICTED: cysteine proteinase inhibitor 12-like isoform 1 [Vitis vinifera]

 Score =  241 bits (614), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 117/189 (61%), Positives = 153/189 (80%)

Query: 33  GGVYDYGGNQNSAEIEGLARFAVQEHNKKENALLQFARVLKAKEQVVAGKLYYLTLEVID 92
           GGV +  G QNSAEI+ LARFAV+EHNKKENALL+FARV+KA+EQVVAG L++LTLEVID
Sbjct: 5   GGVQESQGTQNSAEIDSLARFAVEEHNKKENALLEFARVVKAEEQVVAGTLHHLTLEVID 64

Query: 93  AGKNKIYEAKIWVKPWINFKQLQEFKHAEHGPFSALSDLNLKRGCHGQEWLAVSTNDLEV 152
           AG+ K+YEAK+WVKPW+NFK+LQEFKHA   P    SDL +K+  HG  W  V  +D EV
Sbjct: 65  AGRKKLYEAKVWVKPWMNFKELQEFKHAGDVPTLTPSDLGVKKDGHGPGWQEVPAHDPEV 124

Query: 153 KNAANHAVKSMQRKSNSLFLYELLEILQAKAKVIEDYAKFELHLKLRRGSEEEKHWVEII 212
           +NAANHA+K++Q++SNS+F +EL EIL AKA+V ++  KF++ LK++RG +EEK+ VE+ 
Sbjct: 125 QNAANHAIKTLQQRSNSIFPHELQEILLAKAEVSQNLVKFDMLLKVKRGDKEEKYKVEVH 184

Query: 213 KNSEGKFYL 221
           KN+EG + L
Sbjct: 185 KNNEGAYQL 193

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224073041|ref|XP_002303955.1| predicted protein [Populus trichocarpa] gi|222841387|gb|EEE78934.1| predicted protein [Populus trichocarpa]

 Score =  236 bits (603), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 117/220 (53%), Positives = 161/220 (73%), Gaps = 3/220 (1%)

Query: 5   SVIVLSVLVCGFIELGLCREGNFIQMRP---GGVYDYGGNQNSAEIEGLARFAVQEHNKK 61
            ++ L+V++   I   +   G F Q +    GGV+D   +QNSAEI+ LARFAV EHNKK
Sbjct: 9   PLLTLAVVLAVTITPQISASGGFCQEKMATLGGVHDSQSSQNSAEIDSLARFAVDEHNKK 68

Query: 62  ENALLQFARVLKAKEQVVAGKLYYLTLEVIDAGKNKIYEAKIWVKPWINFKQLQEFKHAE 121
           ENA+L+FARV+KAKEQVVAG +++LT+E ++AGK K+YEAK+WVKPW+NFK+L EFK A 
Sbjct: 69  ENAILEFARVVKAKEQVVAGTMHHLTIEAVEAGKKKLYEAKVWVKPWLNFKELHEFKDAG 128

Query: 122 HGPFSALSDLNLKRGCHGQEWLAVSTNDLEVKNAANHAVKSMQRKSNSLFLYELLEILQA 181
             P    SDL +KR  H   W AV  +D  V++AA HA+KS+Q++SNSLF YEL E++ A
Sbjct: 129 DVPVFTSSDLGVKRDGHAPGWRAVPVHDPSVQDAAVHALKSIQQRSNSLFPYELQEVVHA 188

Query: 182 KAKVIEDYAKFELHLKLRRGSEEEKHWVEIIKNSEGKFYL 221
            A+V++D AKF++ LK++RGS EEK  V + KN+EG ++L
Sbjct: 189 NAEVVDDSAKFDMLLKVKRGSTEEKFKVLVHKNNEGNYHL 228

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|1638842|emb|CAA89697.1| cysteine proteinase inhibitor [Ricinus communis]

 Score =  236 bits (602), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 117/198 (59%), Positives = 155/198 (78%), Gaps = 10/198 (5%)

Query: 33  GGVYDYG-GNQNSAEIEGLARFAVQEHNKKENALLQFARVLKAKEQVVAGKLYYLTLEVI 91
           GGV+D   G  N+AEI+G+ARFAV EHNKKENA+++F RVLKAKEQVVAG L++LT+E I
Sbjct: 6   GGVHDSPQGTANNAEIDGIARFAVDEHNKKENAMVEFGRVLKAKEQVVAGTLHHLTIEAI 65

Query: 92  DAGKNKIYEAKIWVKPWINFKQLQEFKH--------AEHGPFSALSDLNLKRGCHGQEWL 143
           +AGK KIYEAK+WVKPW+NFK+LQEFKH        A H  F++ SDL +KR  HG EW 
Sbjct: 66  EAGKKKIYEAKVWVKPWLNFKELQEFKHATDVADTTASHPSFTS-SDLGVKREGHGAEWK 124

Query: 144 AVSTNDLEVKNAANHAVKSMQRKSNSLFLYELLEILQAKAKVIEDYAKFELHLKLRRGSE 203
            V+ +D  V++AA HAV ++Q++SNSLF Y+L EI+ AKA+V++D+AKF++ LK++RG+ 
Sbjct: 125 EVAAHDPVVQDAATHAVNTIQQRSNSLFPYQLQEIVHAKAQVVDDFAKFDMILKVKRGTS 184

Query: 204 EEKHWVEIIKNSEGKFYL 221
           EEK  VE+ KN+EG F L
Sbjct: 185 EEKFKVEVHKNNEGTFLL 202

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255569167|ref|XP_002525552.1| cysteine protease inhibitor, putative [Ricinus communis] gi|223535131|gb|EEF36811.1| cysteine protease inhibitor, putative [Ricinus communis]

 Score =  236 bits (602), Expect = 6e-60,   Method: Compositional matrix adjust.
 Identities = 117/198 (59%), Positives = 155/198 (78%), Gaps = 10/198 (5%)

Query: 33  GGVYDYG-GNQNSAEIEGLARFAVQEHNKKENALLQFARVLKAKEQVVAGKLYYLTLEVI 91
           GGV+D   G  N+AEI+G+ARFAV EHNKKENA+++F RVLKAKEQVVAG L++LT+E I
Sbjct: 35  GGVHDSPQGTANNAEIDGIARFAVDEHNKKENAMVEFGRVLKAKEQVVAGTLHHLTIEAI 94

Query: 92  DAGKNKIYEAKIWVKPWINFKQLQEFKH--------AEHGPFSALSDLNLKRGCHGQEWL 143
           +AGK KIYEAK+WVKPW+NFK+LQEFKH        A H  F++ SDL +KR  HG EW 
Sbjct: 95  EAGKKKIYEAKVWVKPWLNFKELQEFKHATDVADTTASHPSFTS-SDLGVKREGHGAEWK 153

Query: 144 AVSTNDLEVKNAANHAVKSMQRKSNSLFLYELLEILQAKAKVIEDYAKFELHLKLRRGSE 203
            V+ +D  V++AA HAV ++Q++SNSLF Y+L EI+ AKA+V++D+AKF++ LK++RG+ 
Sbjct: 154 EVAAHDPVVQDAATHAVNTIQQRSNSLFPYQLQEIVHAKAQVVDDFAKFDMILKVKRGTS 213

Query: 204 EEKHWVEIIKNSEGKFYL 221
           EEK  VE+ KN+EG F L
Sbjct: 214 EEKFKVEVHKNNEGTFLL 231

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|192910880|gb|ACF06548.1| cysteine proteinase inhibitor [Elaeis guineensis]

 Score =  235 bits (599), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 121/189 (64%), Positives = 146/189 (77%)

Query: 33  GGVYDYGGNQNSAEIEGLARFAVQEHNKKENALLQFARVLKAKEQVVAGKLYYLTLEVID 92
           G V D   N+NS EIE L RFAVQEHNKKENALL+FARV+KAKEQVVAG L++LTLEV++
Sbjct: 5   GDVRDSQINENSVEIEELGRFAVQEHNKKENALLEFARVVKAKEQVVAGTLHHLTLEVME 64

Query: 93  AGKNKIYEAKIWVKPWINFKQLQEFKHAEHGPFSALSDLNLKRGCHGQEWLAVSTNDLEV 152
           AGK K++EAK+WVKPW+NFK+LQEF H    P    +DL  K G H   W  V  +D  V
Sbjct: 65  AGKKKLFEAKVWVKPWLNFKELQEFTHLGDSPSVTAADLGAKHGGHEPGWRTVPAHDPVV 124

Query: 153 KNAANHAVKSMQRKSNSLFLYELLEILQAKAKVIEDYAKFELHLKLRRGSEEEKHWVEII 212
           + AANHAVK++Q++SNSL  YELLEIL AKA+VIED AKF+L LKL+RGS+EEK  VE+ 
Sbjct: 125 QEAANHAVKTIQQRSNSLAPYELLEILLAKAEVIEDSAKFDLLLKLKRGSKEEKLKVEVH 184

Query: 213 KNSEGKFYL 221
           KN EG F+L
Sbjct: 185 KNLEGTFHL 193

Source: Elaeis guineensis

Species: Elaeis guineensis

Genus: Elaeis

Family: Arecaceae

Order: Arecales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224057220|ref|XP_002299179.1| predicted protein [Populus trichocarpa] gi|118482431|gb|ABK93138.1| unknown [Populus trichocarpa] gi|222846437|gb|EEE83984.1| predicted protein [Populus trichocarpa]

 Score =  234 bits (598), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 114/189 (60%), Positives = 149/189 (78%)

Query: 33  GGVYDYGGNQNSAEIEGLARFAVQEHNKKENALLQFARVLKAKEQVVAGKLYYLTLEVID 92
           GGV+D   +QNS EIE LARFAV EHNKKENA+L+FARV+KAKEQVVAG +++LT+E I+
Sbjct: 5   GGVHDSEASQNSVEIENLARFAVDEHNKKENAILEFARVVKAKEQVVAGTMHHLTIEAIE 64

Query: 93  AGKNKIYEAKIWVKPWINFKQLQEFKHAEHGPFSALSDLNLKRGCHGQEWLAVSTNDLEV 152
           AGK KIYEA++WVKPW+NF +L+EFKHA   P    SDL +KR  HG  W +V  +D  V
Sbjct: 65  AGKKKIYEAEVWVKPWLNFMELKEFKHAGDVPVFTSSDLGVKRDGHGPGWQSVPVHDPSV 124

Query: 153 KNAANHAVKSMQRKSNSLFLYELLEILQAKAKVIEDYAKFELHLKLRRGSEEEKHWVEII 212
           ++AANHA+KS+Q++SNSLF YEL E++ A A+V +D AKF++ LK++RGS EEK  V + 
Sbjct: 125 QDAANHALKSIQQRSNSLFPYELQEVVDANAEVEDDSAKFDMLLKVKRGSAEEKLKVVVH 184

Query: 213 KNSEGKFYL 221
           KNSEG ++L
Sbjct: 185 KNSEGSYHL 193

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	222
TAIR|locus:2092492	234	CYSB "cystatin B" [Arabidopsis	0.945	0.897	0.562	1.1e-57
TAIR|locus:2175294	232	AT5G05110 [Arabidopsis thalian	0.954	0.913	0.542	1.4e-55
TAIR|locus:2058515	125	CYSA "cystatin A" [Arabidopsis	0.509	0.904	0.560	3.7e-32
TAIR|locus:2177063	101	CYS1 "cystatin-1" [Arabidopsis	0.391	0.861	0.551	1.1e-21
UNIPROTKB|Q6TPK4	116	Q6TPK4 "Cysteine proteinase in	0.342	0.655	0.447	3.4e-13
TAIR|locus:2168973	122	AT5G47550 [Arabidopsis thalian	0.423	0.770	0.354	1.5e-10
TAIR|locus:2130709	117	AT4G16500 [Arabidopsis thalian	0.351	0.666	0.367	1.4e-09
TAIR|locus:2045537	147	CYS2 "PHYTOCYSTATIN 2" [Arabid	0.234	0.353	0.433	2.5e-07
WB|WBGene00000535	139	cpi-1 [Caenorhabditis elegans	0.112	0.179	0.52	0.00036
UNIPROTKB|P01035	148	CST3 "Cystatin-C" [Bos taurus	0.252	0.378	0.383	0.00036

TAIR|locus:2092492 CYSB "cystatin B" [Arabidopsis thaliana (taxid:3702)]

 Score = 593 (213.8 bits), Expect = 1.1e-57, P = 1.1e-57
 Identities = 121/215 (56%), Positives = 155/215 (72%)

Query:     9 LSVLVCGFI--ELGLCREGNFIQMRPGGVYDYGGNQNSAEIEGLARFAVQEHNKKENALL 66
             LS+ +   I  +LG C E   +    GGV D   NQNS E+E LARFAV EHNKKENALL
Sbjct:    15 LSLFISSLIASDLGFCNEEMALV---GGVGDVPANQNSGEVESLARFAVDEHNKKENALL 71

Query:    67 QFARVLKAKEQVVAGKLYYLTLEVIDAGKNKIYEAKIWVKPWINFKQLQEFKHAEHGPFS 126
             +FARV+KAKEQVVAG L++LTLE+++AG+ K+YEAK+WVKPW+NFK+LQEFK A   P  
Sbjct:    72 EFARVVKAKEQVVAGTLHHLTLEILEAGQKKLYEAKVWVKPWLNFKELQEFKPASDAPAI 131

Query:   127 ALSDLNLKRGCHGQEWLAVSTNDLEVKNAANHAVKSMQRKSNSLFLYELLEILQAKAKVI 186
               SDL  K+G H   W  V  +D EVK+ A  AVK++Q++SNSLF YELLE++ AKA+V 
Sbjct:   132 TSSDLGCKQGEHESGWREVPGDDPEVKHVAEQAVKTIQQRSNSLFPYELLEVVHAKAEVT 191

Query:   187 EDYAKFELHLKLRRGSEEEKHWVEIIKNSEGKFYL 221
              + AK+ + LKL+RG +EEK  VE+ KN EG  +L
Sbjct:   192 GEAAKYNMLLKLKRGEKEEKFKVEVHKNHEGALHL 226

GO:0004869 "cysteine-type endopeptidase inhibitor activity" evidence=IEA;ISS;IDA

GO:0005576 "extracellular region" evidence=ISM

GO:0006972 "hyperosmotic response" evidence=IMP

GO:0006979 "response to oxidative stress" evidence=IMP

GO:0009409 "response to cold" evidence=IMP

GO:0009414 "response to water deprivation" evidence=IMP

GO:0050897 "cobalt ion binding" evidence=IDA

GO:0005829 "cytosol" evidence=IDA

GO:0005783 "endoplasmic reticulum" evidence=IDA

TAIR|locus:2175294 AT5G05110 [Arabidopsis thaliana (taxid:3702)]

 Score = 573 (206.8 bits), Expect = 1.4e-55, P = 1.4e-55
 Identities = 120/221 (54%), Positives = 161/221 (72%)

Query:     6 VIVLSVLVCGFIELGLCRE------GNFIQMRPGGVYDYGGNQNSA-EIEGLARFAVQEH 58
             + V  VL+ GF +  +C E       N ++M+ GG  D   + N   EI+ +A FAVQEH
Sbjct:    13 ICVSLVLLSGFGQFVICSEEKGTYNDNVVKMKLGGFSDSKNDWNGGKEIDDIALFAVQEH 72

Query:    59 NKKENALLQFARVLKAKEQVVAGKLYYLTLEVIDAGKNKIYEAKIWVKPWINFKQLQEFK 118
             N++ENA+L+ ARVLKA EQVVAGKLY LTLEVI+AG+ KIYEAK+WVKPW+NFKQLQEFK
Sbjct:    73 NRRENAVLELARVLKATEQVVAGKLYRLTLEVIEAGEKKIYEAKVWVKPWMNFKQLQEFK 132

Query:   119 HAEHGPFSALSDLNLKRGCHGQEWLAVSTNDLEVKNAANHAVKSMQRKSNSLFLYELLEI 178
             +    P   +SDL  K   +G +W +VSTN+ EV+ AA HA+KS+Q+KSNSLF Y+L++I
Sbjct:   133 NII--PSFTISDLGFKPDGNGFDWRSVSTNNPEVQEAAKHAMKSLQQKSNSLFPYKLIDI 190

Query:   179 LQAKAKVIEDYAKFELHLKLRRGSEEEKHWVEIIKNSEGKF 219
             + A+AKV+E+  KFEL LKL RG++ EK  VE++K+  GK+
Sbjct:   191 ILARAKVVEERVKFELLLKLERGNKLEKFMVEVMKDQTGKY 231

GO:0004869 "cysteine-type endopeptidase inhibitor activity" evidence=IEA;ISS

GO:0005576 "extracellular region" evidence=ISM

TAIR|locus:2058515 CYSA "cystatin A" [Arabidopsis thaliana (taxid:3702)]

 Score = 352 (129.0 bits), Expect = 3.7e-32, P = 3.7e-32
 Identities = 65/116 (56%), Positives = 91/116 (78%)

Query:     8 VLSVLVCGFIELGLCR-EGNFIQ--MRPGGVYDYGGNQNSAEIEGLARFAVQEHNKKENA 64
             ++++L+CG I+L +CR E    +  M  GGV+D  GNQNS EIE LARFA+QEHNK++N 
Sbjct:     8 IVTLLLCGTIQLAICRSEEKSTEKTMMLGGVHDLRGNQNSGEIESLARFAIQEHNKQQNK 67

Query:    65 LLQFARVLKAKEQVVAGKLYYLTLEVIDAGKNKIYEAKIWVKPWINFKQLQEFKHA 120
             +L+F +++KA+EQVVAG +Y+LTLE  +  + K +EAK+WVKPW+NFKQLQEFK +
Sbjct:    68 ILEFKKIVKAREQVVAGTMYHLTLEAKEGDQTKNFEAKVWVKPWMNFKQLQEFKES 123

GO:0004869 "cysteine-type endopeptidase inhibitor activity" evidence=IEA;ISS;IDA

GO:0005576 "extracellular region" evidence=ISM

GO:0006972 "hyperosmotic response" evidence=IMP

GO:0006979 "response to oxidative stress" evidence=IMP

GO:0009409 "response to cold" evidence=IMP

GO:0009414 "response to water deprivation" evidence=IMP

TAIR|locus:2177063 CYS1 "cystatin-1" [Arabidopsis thaliana (taxid:3702)]

 Score = 253 (94.1 bits), Expect = 1.1e-21, P = 1.1e-21
 Identities = 48/87 (55%), Positives = 60/87 (68%)

Query:    33 GGVYDYGGNQNSAEIEGLARFAVQEHNKKENALLQFARVLKAKEQVVAGKLYYLTLEVID 92
             GGV D   N N  ++E LARFAV EHNK EN  L++ R+L AK QVVAG +++LT+EV D
Sbjct:    11 GGVRDIDANANDLQVESLARFAVDEHNKNENLTLEYKRLLGAKTQVVAGTMHHLTVEVAD 70

Query:    93 AGKNKIYEAKIWVKPWINFKQLQEFKH 119
                NK+YEAK+  K W N KQL+ F H
Sbjct:    71 GETNKVYEAKVLEKAWENLKQLESFNH 97

GO:0004869 "cysteine-type endopeptidase inhibitor activity" evidence=IEA;ISS

GO:0005576 "extracellular region" evidence=ISM

GO:0005774 "vacuolar membrane" evidence=IDA

GO:0005886 "plasma membrane" evidence=IDA

GO:0009611 "response to wounding" evidence=IEP

GO:0034605 "cellular response to heat" evidence=IEP

GO:0042631 "cellular response to water deprivation" evidence=IEP

GO:0070417 "cellular response to cold" evidence=IEP

GO:0005829 "cytosol" evidence=IDA

GO:0006970 "response to osmotic stress" evidence=RCA

GO:0046686 "response to cadmium ion" evidence=RCA

GO:0005783 "endoplasmic reticulum" evidence=IDA

UNIPROTKB|Q6TPK4 Q6TPK4 "Cysteine proteinase inhibitor 1" [Actinidia deliciosa (taxid:3627)]

 Score = 173 (66.0 bits), Expect = 3.4e-13, P = 3.4e-13
 Identities = 34/76 (44%), Positives = 48/76 (63%)

Query:    43 NSAEIEGLARFAVQEHNKKENALLQFARVLKAKEQVVAGKLYYLTLEVIDAGKNKIYEAK 102
             NSAE++ +A+FAV EHNK+ N  LQ+  V++   QVVAG  Y L +   D      YEA 
Sbjct:    39 NSAEVQDVAQFAVSEHNKQANDELQYQSVVRGYTQVVAGTNYRLVIAAKDGAVVGNYEAV 98

Query:   103 IWVKPWINFKQLQEFK 118
             +W KPW++F+ L  F+
Sbjct:    99 VWDKPWMHFRNLTSFR 114

GO:0004869 "cysteine-type endopeptidase inhibitor activity" evidence=IDA

TAIR|locus:2168973 AT5G47550 [Arabidopsis thaliana (taxid:3702)]

 Score = 148 (57.2 bits), Expect = 1.5e-10, P = 1.5e-10
 Identities = 34/96 (35%), Positives = 52/96 (54%)

Query:    31 RPGGVYDYGGNQNSAEIEGLARFAVQEHNKKENALLQFARVLKAKEQVVAGKLYYLTLEV 90
             R GG +    N    ++  +  FAV E+NK+  + L+F  V+  + QVV+G  Y L +  
Sbjct:    27 RVGG-WSPISNVTDPQVVEIGEFAVSEYNKRSESGLKFETVVSGETQVVSGTNYRLKVAA 85

Query:    91 IDA-GKNKIYEAKIWVKPWINFKQLQEFKHAEHGPF 125
              D  G +K Y A +W KPW+ F+ L  F+ A +G F
Sbjct:    86 NDGDGVSKNYLAIVWDKPWMKFRNLTSFEPANNGRF 121

GO:0004869 "cysteine-type endopeptidase inhibitor activity" evidence=IEA;ISS

GO:0005576 "extracellular region" evidence=ISM

GO:0005618 "cell wall" evidence=IDA

TAIR|locus:2130709 AT4G16500 [Arabidopsis thaliana (taxid:3702)]

 Score = 139 (54.0 bits), Expect = 1.4e-09, P = 1.4e-09
 Identities = 29/79 (36%), Positives = 47/79 (59%)

Query:    41 NQNSAEIEGLARFAVQEHNKKENALLQFARVLKAKEQVVAGKLYYLTLEVIDAG-KNKIY 99
             N +  ++  +A++A++EHNK+    L F +V++   QVV+G  Y L +   D G K K Y
Sbjct:    37 NVSDPDVVAVAKYAIEEHNKESKEKLVFVKVVEGTTQVVSGTKYDLKIAAKDGGGKIKNY 96

Query:   100 EAKIWVKPWINFKQLQEFK 118
             EA +  K W++ K L+ FK
Sbjct:    97 EAVVVEKLWLHSKSLESFK 115

GO:0004869 "cysteine-type endopeptidase inhibitor activity" evidence=IEA

GO:0005576 "extracellular region" evidence=ISM

GO:0030234 "enzyme regulator activity" evidence=ISS

GO:0005773 "vacuole" evidence=IDA

GO:0005618 "cell wall" evidence=IDA

GO:0005829 "cytosol" evidence=IDA

GO:0009506 "plasmodesma" evidence=IDA

TAIR|locus:2045537 CYS2 "PHYTOCYSTATIN 2" [Arabidopsis thaliana (taxid:3702)]

 Score = 120 (47.3 bits), Expect = 2.5e-07, P = 2.5e-07
 Identities = 23/53 (43%), Positives = 38/53 (71%)

Query:    66 LQFARVLKAKEQVVAGKLYYLTLEVIDA-GKNKIYEAKIWVKPWINFKQLQEF 117
             LQF+RV+ A++QVVAG  YYL +EV    G  +++++ + ++PW++ KQL  F
Sbjct:    87 LQFSRVVSAQKQVVAGLKYYLRIEVTQPNGSTRMFDSVVVIQPWLHSKQLLGF 139

GO:0004869 "cysteine-type endopeptidase inhibitor activity" evidence=IEA

GO:0005576 "extracellular region" evidence=ISM

GO:0009062 "fatty acid catabolic process" evidence=RCA

GO:0010162 "seed dormancy process" evidence=RCA

WB|WBGene00000535 cpi-1 [Caenorhabditis elegans (taxid:6239)]

 Score = 78 (32.5 bits), Expect = 0.00036, Sum P(2) = 0.00036
 Identities = 13/25 (52%), Positives = 17/25 (68%)

Query:    94 GKNKIYEAKIWVKPWINFKQLQEFK 118
             GK ++Y+  IW KPW NFKQ +  K
Sbjct:   105 GKRELYKVSIWEKPWENFKQTKAEK 129

GO:0004869 "cysteine-type endopeptidase inhibitor activity" evidence=IEA

UNIPROTKB|P01035 CST3 "Cystatin-C" [Bos taurus (taxid:9913)]

 Score = 91 (37.1 bits), Expect = 0.00036, Sum P(2) = 0.00036
 Identities = 23/60 (38%), Positives = 37/60 (61%)

Query:    33 GGVYDYGGNQNSAEIEGLARFAVQEHNKKENALLQ--FARVLKAKEQVVAGKLYYLTLEV 90
             GG+ +   N+   + E L+ FAV E NK+ N   Q    RV++A++QVV+G  Y+L +E+
Sbjct:    40 GGLMEADVNEEGVQ-EALS-FAVSEFNKRSNDAYQSRVVRVVRARKQVVSGMNYFLDVEL 97

GO:0005576 "extracellular region" evidence=IEA

GO:0004869 "cysteine-type endopeptidase inhibitor activity" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q8H0X6	CYT6_ARATH	No assigned EC number	0.5627	0.9459	0.8974	yes	no
Q0JNR2	CYT12_ORYSJ	No assigned EC number	0.5661	0.8513	0.756	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: gw1.1454.5.1 hypothetical protein (190 aa) (Populus trichocarpa)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	222
smart00043	107	smart00043, CY, Cystatin-like domain	5e-19
cd00042	105	cd00042, CY, Cystatin-like domain; Cystatins are a	5e-19
pfam00031	92	pfam00031, Cystatin, Cystatin domain	7e-14

>gnl|CDD|214484 smart00043, CY, Cystatin-like domain

 Score = 78.6 bits (194), Expect = 5e-19
 Identities = 39/108 (36%), Positives = 50/108 (46%), Gaps = 20/108 (18%)

Query: 30  MRPGGVYDYGGNQNSAEIEGLARFAVQEHNKKENALLQFA--RVLKAKEQVVAGKLYYLT 87
           +  GG  D     N  E++  A FAV E+NKK N   +    +V+ AK QVVAG  YYL 
Sbjct: 1   LCLGGPSDV--PPNDPEVQEAADFAVAEYNKKSNDKYELRVIKVVSAKSQVVAGTNYYLK 58

Query: 88  LEVID----------------AGKNKIYEAKIWVKPWINFKQLQEFKH 119
           +EV +                    K   AK+W KPW N  +L EFK 
Sbjct: 59  VEVGETNCKKLSVDLENCPFLDQGEKFCTAKVWEKPWENKIKLVEFKC 106

Cystatins are a family of cysteine protease inhibitors that occur mainly as single domain proteins. However some extracellular proteins such as kininogen, His-rich glycoprotein and fetuin also contain these domains. Length = 107

>gnl|CDD|238002 cd00042, CY, Cystatin-like domain; Cystatins are a family of cysteine protease inhibitors that occur mainly as single domain proteins

 Score = 78.7 bits (194), Expect = 5e-19
 Identities = 46/107 (42%), Positives = 55/107 (51%), Gaps = 22/107 (20%)

Query: 33  GGVYDYGGNQNSAEIEGLARFAVQEHNKKENAL-LQFARVLKAKEQVVAGKLYYLTLEVI 91
           GG  D   N    E++ LA FAV E+NKK N   L+F +VL AK QVVAG  YY+T+E  
Sbjct: 1   GGPSDIPAN--DPEVQELADFAVAEYNKKSNDKYLEFFKVLSAKSQVVAGTNYYITVEAG 58

Query: 92  DA-------------------GKNKIYEAKIWVKPWINFKQLQEFKH 119
           D                    GK K   AK+W KPW NFK+L  FK 
Sbjct: 59  DTNCKKSSVPLDCPDCKLLEEGKKKFCTAKVWEKPWENFKELLSFKC 105

However some extracellular proteins such as kininogen, His-rich glycoprotein and fetuin also contain these domains. Length = 105

>gnl|CDD|215667 pfam00031, Cystatin, Cystatin domain

 Score = 64.6 bits (158), Expect = 7e-14
 Identities = 27/83 (32%), Positives = 40/83 (48%), Gaps = 5/83 (6%)

Query: 41  NQNSAEIEGLARFAVQEHNKKENA-LLQFARVLKAKEQVVAGKLYYLTLEVIDA---GKN 96
           N N  E++    FA+ ++N K N    +   VL+AK QVVAG  YY+ +EV +       
Sbjct: 7   NDNDPEVQEALDFALAKYNAKSNNYYFELVEVLRAKSQVVAGMNYYIKVEVGETNCSKSK 66

Query: 97  KIYEAKIWV-KPWINFKQLQEFK 118
           K  E    + +    F + Q FK
Sbjct: 67  KDLEDCPLLDEKQEGFCKAQVFK 89

Very diverse family. Attempts to define separate sub-families failed. Typically, either the N-terminal or C-terminal end is very divergent. But splitting into two domains would make very short families. pfam00666 are related to this family but have not been included. Length = 92

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	222
PF07430	202	PP1: Phloem filament protein PP1; InterPro: IPR009	99.88
cd00042	105	CY Substituted updates: Jan 30, 2002	99.86
smart00043	107	CY Cystatin-like domain. Cystatins are a family of	99.85
PF00031	94	Cystatin: Cystatin domain; InterPro: IPR000010 Pep	99.78
PF00031	94	Cystatin: Cystatin domain; InterPro: IPR000010 Pep	99.68
cd00042	105	CY Substituted updates: Jan 30, 2002	99.67
smart00043	107	CY Cystatin-like domain. Cystatins are a family of	99.63
PF07430	202	PP1: Phloem filament protein PP1; InterPro: IPR009	99.41
TIGR01638	92	Atha_cystat_rel Arabidopsis thaliana cystatin-rela	98.34
TIGR01638	92	Atha_cystat_rel Arabidopsis thaliana cystatin-rela	97.96
PF06907	220	Latexin: Latexin; InterPro: IPR009684 This family	96.38
TIGR01572	265	A_thl_para_3677 Arabidopsis paralogous family TIGR	93.01
PF00666	67	Cathelicidins: Cathelicidin; InterPro: IPR001894 T	89.58
PF06907	220	Latexin: Latexin; InterPro: IPR009684 This family	83.11

>PF07430 PP1: Phloem filament protein PP1; InterPro: IPR009994 This domain represents a conserved region approximately 200 residues long, four copies of which are found within the plant phloem filament protein PP1

Probab=99.88  E-value=1.8e-21  Score=160.14  Aligned_cols=179  Identities=16%  Similarity=0.201  Sum_probs=148.1

Q ss_pred             CCceeeeCCCCCCCHHHHHHHHHHHHHHHhhcCCceeEEEEEEEE--EEeeccEEEEEEEEEEe-CCcceEEEEEEEEec
Q 027502           31 RPGGVYDYGGNQNSAEIEGLARFAVQEHNKKENALLQFARVLKAK--EQVVAGKLYYLTLEVID-AGKNKIYEAKIWVKP  107 (222)
Q Consensus        31 l~GG~~~i~~~~~d~~v~~~a~fAv~~~N~~sn~~~~~~kV~~a~--~QVVaG~nY~l~v~v~~-~~~~~~c~~~V~~~P  107 (222)
                      ..|||.+++ |+.+|.+|++++||+.+++.+-++.++|..|.+.+  .|.+.++.|+|.+++.| -++...|++.|+++-
T Consensus         6 ~~~~w~~ip-~v~~~~~q~v~~~~veq~k~~~~~~l~~~~v~egwy~el~~~~~~yrlhv~a~d~l~r~l~~e~ii~e~~   84 (202)
T PF07430_consen    6 FSPKWIKIP-DVKEPCLQEVAKFAVEQFKIQYGDSLKFRSVVEGWYFELCPNSLKYRLHVKAIDFLGRSLKYEAIIIEEK   84 (202)
T ss_pred             cCcccccCC-cccchHHHHHHHHHHHHHhhhcccceeeeeeeeceeecccccceeEEEeehhhhhhccccceeeeeeehh
Confidence            479999997 58999999999999999999998889999999998  88899999999999988 588899999999995


Q ss_pred             --CCCceeeEEEeeCCCCCCcccccccccccCCCCcceec-cCCCHHHHHHHHHHHHHHHhhccCccceeEEEEEEeeee
Q 027502          108 --WINFKQLQEFKHAEHGPFSALSDLNLKRGCHGQEWLAV-STNDLEVKNAANHAVKSMQRKSNSLFLYELLEILQAKAK  184 (222)
Q Consensus       108 --W~~~~~l~s~~c~~~~~~~~~~~~~~k~~~~~gg~~~i-~~~d~~v~e~a~fAv~~~N~~sn~~~~~~~~kV~~a~~Q  184 (222)
                        |++.++|.|+--.-..-....+    ...+....|.++ |+++|.||+++.|||.||| ..++.  .+|.+|.++..|
T Consensus        85 ~~~~~~~kl~s~l~~v~~~~~v~p----v~~p~~~~Wi~I~nin~p~VQeLgkFAV~EhN-K~gd~--LkF~KV~eGw~q  157 (202)
T PF07430_consen   85 PQLTRIRKLASILAIVSGGAVVYP----VATPQSKKWIPIPNINNPFVQELGKFAVIEHN-KAGDK--LKFEKVYEGWYQ  157 (202)
T ss_pred             hhhhhhhhhheeeEEEeeceeecc----ccCcccCCCEECCCCCcHHHHHHHHHHHHHHh-hcCCc--eEEEEEeeEEEE
Confidence              9999998887543211000000    001123569888 4999999999999999999 55665  499999999999


Q ss_pred             eec--ceeEEEEEEEEccC-CccceEEEEEEeCCCCc
Q 027502          185 VIE--DYAKFELHLKLRRG-SEEEKHWVEIIKNSEGK  218 (222)
Q Consensus       185 VVa--G~~yy~l~l~~~~g-~~~~~~~~~v~~~~~~~  218 (222)
                      =++  |++ |+|+|.+++| ++...|+|.|++++--|
T Consensus       158 ~l~~d~ik-YrLhI~AkDg~G~~~~YeAvV~~k~~~s  193 (202)
T PF07430_consen  158 DLGNDGIK-YRLHIVAKDGLGRLGNYEAVVWEKQFLS  193 (202)
T ss_pred             eccCCCce-EEEEEEeecCCCCcCceEEEEEEeccCc
Confidence            775  688 6899999999 67889999999987544

This is one of the constituents of the proteinaceous filaments found in the sieve elements of Cucurbita phloem [].

>cd00042 CY Substituted updates: Jan 30, 2002

Probab=99.86  E-value=5.2e-21  Score=144.82  Aligned_cols=85  Identities=54%  Similarity=0.822  Sum_probs=80.5

Q ss_pred             ceeeeCCCCCCCHHHHHHHHHHHHHHHhhcCCc-eeEEEEEEEEEEeeccEEEEEEEEEEeC------------------
Q 027502           33 GGVYDYGGNQNSAEIEGLARFAVQEHNKKENAL-LQFARVLKAKEQVVAGKLYYLTLEVIDA------------------   93 (222)
Q Consensus        33 GG~~~i~~~~~d~~v~~~a~fAv~~~N~~sn~~-~~~~kV~~a~~QVVaG~nY~l~v~v~~~------------------   93 (222)
                      |||.+++  .+||+++++++||+.+||+.+++. |.+.+|++|++|||+|++|+|++++.++                  
T Consensus         1 gg~~~~~--~~d~~~~~~~~~a~~~~N~~~~~~~~~~~~i~~~~~QvvaG~~y~i~~~~~~t~C~k~~~~~~~~~c~~~~   78 (105)
T cd00042           1 GGPSDIP--ANDPEVQELADFAVAEYNKKSNDKYLEFFKVLSAKSQVVAGTNYYITVEAGDTNCKKSSVPLDCPDCKLLE   78 (105)
T ss_pred             CCCccCC--CCCHHHHHHHHHHHHHHHhhcCccceeEEEEEEEEEEEEeeeEEEEEEEEecccccccCcccccccccccc
Confidence            8999887  799999999999999999999998 8889999999999999999999999975                  


Q ss_pred             -CcceEEEEEEEEecCCCceeeEEEee
Q 027502           94 -GKNKIYEAKIWVKPWINFKQLQEFKH  119 (222)
Q Consensus        94 -~~~~~c~~~V~~~PW~~~~~l~s~~c  119 (222)
                       +....|++.||.+||.+..++++++|
T Consensus        79 ~~~~~~C~~~V~~~pw~~~~~l~~~~C  105 (105)
T cd00042          79 EGKKKFCTAKVWEKPWENFKELLSFKC  105 (105)
T ss_pred             cCCCEEEEEEEEecCCCCceeeeeccC
Confidence             57899999999999999999999988

>smart00043 CY Cystatin-like domain

Probab=99.85  E-value=4.1e-21  Score=145.93  Aligned_cols=88  Identities=44%  Similarity=0.622  Sum_probs=80.5

Q ss_pred             CCceeeeCCCCCCCHHHHHHHHHHHHHHHhhcCCcee--EEEEEEEEEEeeccEEEEEEEEEEeCCcc------------
Q 027502           31 RPGGVYDYGGNQNSAEIEGLARFAVQEHNKKENALLQ--FARVLKAKEQVVAGKLYYLTLEVIDAGKN------------   96 (222)
Q Consensus        31 l~GG~~~i~~~~~d~~v~~~a~fAv~~~N~~sn~~~~--~~kV~~a~~QVVaG~nY~l~v~v~~~~~~------------   96 (222)
                      ++|||.+++  .+||+++++|+||+.+||+++++.|.  +.+|++|++|||+|++|+|++++.++.-.            
T Consensus         2 ~~Gg~~~~~--~~d~~~~~~~~~a~~~~N~~~~~~~~~~~~~v~~a~~QvvaG~~y~l~~~v~~t~C~k~~~~~~~C~~~   79 (107)
T smart00043        2 CLGGPSDVP--PNDPEVQEAADFAVAEYNKKSNDKYELRVIKVVSAKSQVVAGTNYYLKVEVGETNCKKLSVDLENCPFL   79 (107)
T ss_pred             CCCCCccCC--CCCHHHHHHHHHHHHHHHHhcccchhhhhhhhheeeeeeecceEEEEEEEEEeceeccCCcccccCCCC
Confidence            689999997  68999999999999999999998876  79999999999999999999999985322            


Q ss_pred             ----eEEEEEEEEecCCCceeeEEEeeC
Q 027502           97 ----KIYEAKIWVKPWINFKQLQEFKHA  120 (222)
Q Consensus        97 ----~~c~~~V~~~PW~~~~~l~s~~c~  120 (222)
                          ..|.++||.+||.++.++++++|.
T Consensus        80 ~~~~~~C~~~V~~~pw~~~~~~~~~~C~  107 (107)
T smart00043       80 DQGEKFCTAKVWEKPWENKIKLVEFKCT  107 (107)
T ss_pred             CCCccEEEEEEEecCCCCccCccceecC
Confidence                489999999999999999999984

Cystatins are a family of cysteine protease inhibitors that occur mainly as single domain proteins. However some extracellular proteins such as kininogen, His-rich glycoprotein and fetuin also contain these domains.

>PF00031 Cystatin: Cystatin domain; InterPro: IPR000010 Peptide proteinase inhibitors can be found as single domain proteins or as single or multiple domains within proteins; these are referred to as either simple or compound inhibitors, respectively

Probab=99.78  E-value=3.1e-18  Score=126.94  Aligned_cols=74  Identities=32%  Similarity=0.614  Sum_probs=68.3

Q ss_pred             ceeeeCCCCCCCHHHHHHHHHHHHHHHhhcCCc--eeEEEEEEEEEEeeccEEEEEEEEEEeC-----------------
Q 027502           33 GGVYDYGGNQNSAEIEGLARFAVQEHNKKENAL--LQFARVLKAKEQVVAGKLYYLTLEVIDA-----------------   93 (222)
Q Consensus        33 GG~~~i~~~~~d~~v~~~a~fAv~~~N~~sn~~--~~~~kV~~a~~QVVaG~nY~l~v~v~~~-----------------   93 (222)
                      |||.+++  .+||+++++|+||+.+||+++++.  |.+.+|++|++|||+|++|+|++++.++                 
T Consensus         1 Gg~~~~~--~~dp~v~~~~~~al~~~N~~~~~~~~~~~~~v~~a~~QvV~G~~Y~i~~~~~~t~C~k~~~~~~~C~~~~~   78 (94)
T PF00031_consen    1 GGPSPVD--PNDPEVQEAAEFALDKFNEQSNSGYKFKLVKVISATTQVVAGINYYIEFEVGETNCKKSSKDFENCPFQEE   78 (94)
T ss_dssp             SSEEEEC--TTSHHHHHHHHHHHHHHHHHSTTSEEEEEEEEEEEEEEESSSEEEEEEEEEEEEEEETCEEEEEECEBEST
T ss_pred             CCCccCC--CCCHHHHHHHHHHHHHHHHhCcccCcceeeeeeEEEEeecCCceEEEEEEEEcccccccccccccCCcccc
Confidence            8999998  599999999999999999999766  6789999999999999999999999873                 


Q ss_pred             -CcceEEEEEEEEecC
Q 027502           94 -GKNKIYEAKIWVKPW  108 (222)
Q Consensus        94 -~~~~~c~~~V~~~PW  108 (222)
                       .....|.++||.+||
T Consensus        79 ~~~~~~C~~~v~~~pW   94 (94)
T PF00031_consen   79 QPWTKFCKFTVWERPW   94 (94)
T ss_dssp             TSSEEEEEEEEEEECG
T ss_pred             CCceeeEEEEEEECCC
Confidence             457899999999999

In many cases they are synthesised as part of a larger precursor protein, either as a prepropeptide or as an N-terminal domain associated with an inactive peptidase or zymogen. This domain prevents access of the substrate to the active site. Removal of the N-terminal inhibitor domain either by interaction with a second peptidase or by autocatalytic cleavage activates the zymogen. Other inhibitors interact direct with proteinases using a simple noncovalent lock and key mechanism; while yet others use a conformational change-based trapping mechanism that depends on their structural and thermodynamic properties. The cystatins are cysteine proteinase inhibitors belonging to MEROPS inhibitor family I25, clan IH [, , ]. They mainly inhibit peptidases belonging to peptidase families C1 (papain family) and C13 (legumain family). The cystatin family includes: The Type 1 cystatins, which are intracellular cystatins that are present in the cytosol of many cell types, but can also appear in body fluids at significant concentrations. They are single-chain polypeptides of about 100 residues, which have neither disulphide bonds nor carbohydrate side chains. The Type 2 cystatins, which are mainly extracellular secreted polypeptides synthesised with a 19-28 residue signal peptide. They are broadly distributed and found in most body fluids. The Type 3 cystatins, which are multidomain proteins. The mammalian representatives of this group are the kininogens. There are three different kininogens in mammals: H- (high molecular mass, IPR002395 from INTERPRO) and L- (low molecular mass) kininogen which are found in a number of species, and T-kininogen that is found only in rat. Unclassified cystatins. These are cystatin-like proteins found in a range of organisms: plant phytocystatins, fetuin in mammals, insect cystatins and a puff adder venom cystatin which inhibits metalloproteases of the MEROPS peptidase family M12 (astacin/adamalysin). Also a number of the cystatins-like proteins have been shown to be devoid of inhibitory activity. All true cystatins inhibit cysteine peptidases of the papain family (MEROPS peptidase family C1), and some also inhibit legumain family enzymes (MEROPS peptidase family C13). These peptidases play key roles in physiological processes, such as intracellular protein degradation (cathepsins B, H and L), are pivotal in the remodelling of bone (cathepsin K), and may be important in the control of antigen presentation (cathepsin S, mammalian legumain). Moreover, the activities of such peptidases are increased in pathophysiological conditions, such as cancer metastasis and inflammation. Additionally, such peptidases are essential for several pathogenic parasites and bacteria. Thus in animals cystatins not only have capacity to regulate normal body processes and perhaps cause disease when down-regulated, but in other organisms may also participate in defence against biotic and abiotic stress. ; GO: 0004869 cysteine-type endopeptidase inhibitor activity; PDB: 3L0R_B 2W9P_K 2W9Q_A 3S67_A 3QRD_D 1R4C_G 3GAX_A 1TIJ_B 1G96_A 3NX0_A ....

>PF00031 Cystatin: Cystatin domain; InterPro: IPR000010 Peptide proteinase inhibitors can be found as single domain proteins or as single or multiple domains within proteins; these are referred to as either simple or compound inhibitors, respectively

Probab=99.68  E-value=2.7e-16  Score=116.51  Aligned_cols=61  Identities=23%  Similarity=0.349  Sum_probs=58.6

Q ss_pred             CcceeccCCCHHHHHHHHHHHHHHHhhccCccceeEEEEEEeeeeeecceeEEEEEEEEccC
Q 027502          140 QEWLAVSTNDLEVKNAANHAVKSMQRKSNSLFLYELLEILQAKAKVIEDYAKFELHLKLRRG  201 (222)
Q Consensus       140 gg~~~i~~~d~~v~e~a~fAv~~~N~~sn~~~~~~~~kV~~a~~QVVaG~~yy~l~l~~~~g  201 (222)
                      |||.++++|||+++++|+||+.+||+++|+.+.|++.+|++|++|||+|++| +|++++.++
T Consensus         1 Gg~~~~~~~dp~v~~~~~~al~~~N~~~~~~~~~~~~~v~~a~~QvV~G~~Y-~i~~~~~~t   61 (94)
T PF00031_consen    1 GGPSPVDPNDPEVQEAAEFALDKFNEQSNSGYKFKLVKVISATTQVVAGINY-YIEFEVGET   61 (94)
T ss_dssp             SSEEEECTTSHHHHHHHHHHHHHHHHHSTTSEEEEEEEEEEEEEEESSSEEE-EEEEEEEEE
T ss_pred             CCCccCCCCCHHHHHHHHHHHHHHHHhCcccCcceeeeeeEEEEeecCCceE-EEEEEEEcc
Confidence            7999999999999999999999999999999999999999999999999995 699999885

In many cases they are synthesised as part of a larger precursor protein, either as a prepropeptide or as an N-terminal domain associated with an inactive peptidase or zymogen. This domain prevents access of the substrate to the active site. Removal of the N-terminal inhibitor domain either by interaction with a second peptidase or by autocatalytic cleavage activates the zymogen. Other inhibitors interact direct with proteinases using a simple noncovalent lock and key mechanism; while yet others use a conformational change-based trapping mechanism that depends on their structural and thermodynamic properties. The cystatins are cysteine proteinase inhibitors belonging to MEROPS inhibitor family I25, clan IH [, , ]. They mainly inhibit peptidases belonging to peptidase families C1 (papain family) and C13 (legumain family). The cystatin family includes: The Type 1 cystatins, which are intracellular cystatins that are present in the cytosol of many cell types, but can also appear in body fluids at significant concentrations. They are single-chain polypeptides of about 100 residues, which have neither disulphide bonds nor carbohydrate side chains. The Type 2 cystatins, which are mainly extracellular secreted polypeptides synthesised with a 19-28 residue signal peptide. They are broadly distributed and found in most body fluids. The Type 3 cystatins, which are multidomain proteins. The mammalian representatives of this group are the kininogens. There are three different kininogens in mammals: H- (high molecular mass, IPR002395 from INTERPRO) and L- (low molecular mass) kininogen which are found in a number of species, and T-kininogen that is found only in rat. Unclassified cystatins. These are cystatin-like proteins found in a range of organisms: plant phytocystatins, fetuin in mammals, insect cystatins and a puff adder venom cystatin which inhibits metalloproteases of the MEROPS peptidase family M12 (astacin/adamalysin). Also a number of the cystatins-like proteins have been shown to be devoid of inhibitory activity. All true cystatins inhibit cysteine peptidases of the papain family (MEROPS peptidase family C1), and some also inhibit legumain family enzymes (MEROPS peptidase family C13). These peptidases play key roles in physiological processes, such as intracellular protein degradation (cathepsins B, H and L), are pivotal in the remodelling of bone (cathepsin K), and may be important in the control of antigen presentation (cathepsin S, mammalian legumain). Moreover, the activities of such peptidases are increased in pathophysiological conditions, such as cancer metastasis and inflammation. Additionally, such peptidases are essential for several pathogenic parasites and bacteria. Thus in animals cystatins not only have capacity to regulate normal body processes and perhaps cause disease when down-regulated, but in other organisms may also participate in defence against biotic and abiotic stress. ; GO: 0004869 cysteine-type endopeptidase inhibitor activity; PDB: 3L0R_B 2W9P_K 2W9Q_A 3S67_A 3QRD_D 1R4C_G 3GAX_A 1TIJ_B 1G96_A 3NX0_A ....

>cd00042 CY Substituted updates: Jan 30, 2002

Probab=99.67  E-value=4.9e-16  Score=117.47  Aligned_cols=75  Identities=20%  Similarity=0.260  Sum_probs=68.4

Q ss_pred             CcceeccCCCHHHHHHHHHHHHHHHhhccCccceeEEEEEEeeeeeecceeEEEEEEEEccCC-----------------
Q 027502          140 QEWLAVSTNDLEVKNAANHAVKSMQRKSNSLFLYELLEILQAKAKVIEDYAKFELHLKLRRGS-----------------  202 (222)
Q Consensus       140 gg~~~i~~~d~~v~e~a~fAv~~~N~~sn~~~~~~~~kV~~a~~QVVaG~~yy~l~l~~~~g~-----------------  202 (222)
                      |||.+++++||+++++++||+++||+.+|+.| |++.+|++|++|||+|++| .|+++++++.                 
T Consensus         1 gg~~~~~~~d~~~~~~~~~a~~~~N~~~~~~~-~~~~~i~~~~~QvvaG~~y-~i~~~~~~t~C~k~~~~~~~~~c~~~~   78 (105)
T cd00042           1 GGPSDIPANDPEVQELADFAVAEYNKKSNDKY-LEFFKVLSAKSQVVAGTNY-YITVEAGDTNCKKSSVPLDCPDCKLLE   78 (105)
T ss_pred             CCCccCCCCCHHHHHHHHHHHHHHHhhcCccc-eeEEEEEEEEEEEEeeeEE-EEEEEEecccccccCcccccccccccc
Confidence            78999999999999999999999999999999 9999999999999999995 7999999752                 


Q ss_pred             --ccceEEEEEEeCCC
Q 027502          203 --EEEKHWVEIIKNSE  216 (222)
Q Consensus       203 --~~~~~~~~v~~~~~  216 (222)
                        ....+.+.||+.|-
T Consensus        79 ~~~~~~C~~~V~~~pw   94 (105)
T cd00042          79 EGKKKFCTAKVWEKPW   94 (105)
T ss_pred             cCCCEEEEEEEEecCC
Confidence              35578999999885

>smart00043 CY Cystatin-like domain

Probab=99.63  E-value=7.5e-16  Score=116.92  Aligned_cols=78  Identities=21%  Similarity=0.216  Sum_probs=69.1

Q ss_pred             CCCcceeccCCCHHHHHHHHHHHHHHHhhccCccceeEEEEEEeeeeeecceeEEEEEEEEccCC--cc-----------
Q 027502          138 HGQEWLAVSTNDLEVKNAANHAVKSMQRKSNSLFLYELLEILQAKAKVIEDYAKFELHLKLRRGS--EE-----------  204 (222)
Q Consensus       138 ~~gg~~~i~~~d~~v~e~a~fAv~~~N~~sn~~~~~~~~kV~~a~~QVVaG~~yy~l~l~~~~g~--~~-----------  204 (222)
                      .+|||.+++++||+++++|+||+.+||+++|+.|.+++.+|++|++|||+|++| .|++++.++.  +.           
T Consensus         2 ~~Gg~~~~~~~d~~~~~~~~~a~~~~N~~~~~~~~~~~~~v~~a~~QvvaG~~y-~l~~~v~~t~C~k~~~~~~~C~~~~   80 (107)
T smart00043        2 CLGGPSDVPPNDPEVQEAADFAVAEYNKKSNDKYELRVIKVVSAKSQVVAGTNY-YLKVEVGETNCKKLSVDLENCPFLD   80 (107)
T ss_pred             CCCCCccCCCCCHHHHHHHHHHHHHHHHhcccchhhhhhhhheeeeeeecceEE-EEEEEEEeceeccCCcccccCCCCC
Confidence            579999999999999999999999999999999988899999999999999995 6999988643  32           


Q ss_pred             ---ceEEEEEEeCCC
Q 027502          205 ---EKHWVEIIKNSE  216 (222)
Q Consensus       205 ---~~~~~~v~~~~~  216 (222)
                         ..+.++||..|-
T Consensus        81 ~~~~~C~~~V~~~pw   95 (107)
T smart00043       81 QGEKFCTAKVWEKPW   95 (107)
T ss_pred             CCccEEEEEEEecCC
Confidence               268899998874

Cystatins are a family of cysteine protease inhibitors that occur mainly as single domain proteins. However some extracellular proteins such as kininogen, His-rich glycoprotein and fetuin also contain these domains.

>PF07430 PP1: Phloem filament protein PP1; InterPro: IPR009994 This domain represents a conserved region approximately 200 residues long, four copies of which are found within the plant phloem filament protein PP1

Probab=99.41  E-value=7.1e-13  Score=109.55  Aligned_cols=85  Identities=28%  Similarity=0.346  Sum_probs=75.9

Q ss_pred             ccCCceeeeCCCCCCCHHHHHHHHHHHHHHHhhcCCceeEEEEEEEEEEeec--cEEEEEEEEEEeC-CcceEEEEEEEE
Q 027502           29 QMRPGGVYDYGGNQNSAEIEGLARFAVQEHNKKENALLQFARVLKAKEQVVA--GKLYYLTLEVIDA-GKNKIYEAKIWV  105 (222)
Q Consensus        29 ~~l~GG~~~i~~~~~d~~v~~~a~fAv~~~N~~sn~~~~~~kV~~a~~QVVa--G~nY~l~v~v~~~-~~~~~c~~~V~~  105 (222)
                      ++....|.+++ |+++|.+|++++|||.+|| +.++.++|.+|.+++.|-++  |++|+|++.+.++ |+...|+|.||+
T Consensus       111 ~p~~~~Wi~I~-nin~p~VQeLgkFAV~EhN-K~gd~LkF~KV~eGw~q~l~~d~ikYrLhI~AkDg~G~~~~YeAvV~~  188 (202)
T PF07430_consen  111 TPQSKKWIPIP-NINNPFVQELGKFAVIEHN-KAGDKLKFEKVYEGWYQDLGNDGIKYRLHIVAKDGLGRLGNYEAVVWE  188 (202)
T ss_pred             CcccCCCEECC-CCCcHHHHHHHHHHHHHHh-hcCCceEEEEEeeEEEEeccCCCceEEEEEEeecCCCCcCceEEEEEE
Confidence            55578999997 5899999999999999999 67889999999999999996  6999999999997 999999999999


Q ss_pred             e-cCCCceeeE
Q 027502          106 K-PWINFKQLQ  115 (222)
Q Consensus       106 ~-PW~~~~~l~  115 (222)
                      + +|.+..+++
T Consensus       189 k~~~sk~i~i~  199 (202)
T PF07430_consen  189 KQFLSKKIKIL  199 (202)
T ss_pred             eccCcceEEEE
Confidence            9 577666654

This is one of the constituents of the proteinaceous filaments found in the sieve elements of Cucurbita phloem [].

>TIGR01638 Atha_cystat_rel Arabidopsis thaliana cystatin-related protein

Probab=98.34  E-value=1.8e-06  Score=64.15  Aligned_cols=64  Identities=23%  Similarity=0.241  Sum_probs=55.1

Q ss_pred             CCCHHHHHHHHHHHHHHHhhcCCceeEEEEEEEEEEeeccEEEEEEEEEEeC--C-cceEEEEEEEE
Q 027502           42 QNSAEIEGLARFAVQEHNKKENALLQFARVLKAKEQVVAGKLYYLTLEVIDA--G-KNKIYEAKIWV  105 (222)
Q Consensus        42 ~~d~~v~~~a~fAv~~~N~~sn~~~~~~kV~~a~~QVVaG~nY~l~v~v~~~--~-~~~~c~~~V~~  105 (222)
                      .+..-+..++++|+++||...+..+.|++|++|..|..+|+.|+||+.+.+.  + ....+++.||.
T Consensus        10 T~rd~~~~la~~al~k~N~~~~t~lEfV~vVrAn~~~~~g~~~yITF~Ard~~d~p~~e~~q~~v~~   76 (92)
T TIGR01638        10 TNRDLLERLSYVASKKYNDTKFLNLELVEVVRANYRGGAKSKSYITFEARDKPDGPLGEYQQAAVVY   76 (92)
T ss_pred             CHHHHHHHHHHHHHHHhhhhcCceEEEEEEEEEEeeccceEEEEEEEEEecCCCCCHHHhhheeeEe
Confidence            4667889999999999999999999999999999999999999999999983  3 44555666665

This model represents a family similar in sequence and probably homologous to a large family of cysteine proteinase inhibitors, or cystatins, as described by pfam model pfam00031. Cystatins may help plants resist attack by insects.

>TIGR01638 Atha_cystat_rel Arabidopsis thaliana cystatin-related protein

Probab=97.96  E-value=3.1e-05  Score=57.58  Aligned_cols=66  Identities=15%  Similarity=0.148  Sum_probs=53.6

Q ss_pred             eccCCCHHHHHHHHHHHHHHHhhccCccceeEEEEEEeeeeeecceeEEEEEEEEccCCc---cceEEEEEE
Q 027502          144 AVSTNDLEVKNAANHAVKSMQRKSNSLFLYELLEILQAKAKVIEDYAKFELHLKLRRGSE---EEKHWVEII  212 (222)
Q Consensus       144 ~i~~~d~~v~e~a~fAv~~~N~~sn~~~~~~~~kV~~a~~QVVaG~~yy~l~l~~~~g~~---~~~~~~~v~  212 (222)
                      +...+..-+.+++++|+++||+.-+..+  +|++|++|.-|+.+|..| +||+++.+...   .+.|.+.|+
T Consensus         7 p~~T~rd~~~~la~~al~k~N~~~~t~l--EfV~vVrAn~~~~~g~~~-yITF~Ard~~d~p~~e~~q~~v~   75 (92)
T TIGR01638         7 PIETNRDLLERLSYVASKKYNDTKFLNL--ELVEVVRANYRGGAKSKS-YITFEARDKPDGPLGEYQQAAVV   75 (92)
T ss_pred             cccCHHHHHHHHHHHHHHHhhhhcCceE--EEEEEEEEEeeccceEEE-EEEEEEecCCCCCHHHhhheeeE
Confidence            4456777899999999999999987665  999999999999999995 69999997543   344555554

This model represents a family similar in sequence and probably homologous to a large family of cysteine proteinase inhibitors, or cystatins, as described by pfam model pfam00031. Cystatins may help plants resist attack by insects.

>PF06907 Latexin: Latexin; InterPro: IPR009684 This family consists of several animal specific latexin and proteins related to latexin that belong to MEROPS proteinase inhibitor family I47, clan I- []

Probab=96.38  E-value=0.55  Score=40.24  Aligned_cols=167  Identities=16%  Similarity=0.090  Sum_probs=91.8

Q ss_pred             CCCHHHHHHHHHHHHHHHhhcCCc---eeEEEEEEEEEEeec--cEEEEEEEEEEe---CCcceEEEEEEEEecCCCcee
Q 027502           42 QNSAEIEGLARFAVQEHNKKENAL---LQFARVLKAKEQVVA--GKLYYLTLEVID---AGKNKIYEAKIWVKPWINFKQ  113 (222)
Q Consensus        42 ~~d~~v~~~a~fAv~~~N~~sn~~---~~~~kV~~a~~QVVa--G~nY~l~v~v~~---~~~~~~c~~~V~~~PW~~~~~  113 (222)
                      ++.-..+.+|+-|..-+|-..+++   +.+.+|.+|...++.  |-+|+|++.+.+   ++....|.|+|+-. -.+..-
T Consensus         4 p~h~~a~rAA~va~hy~N~~~GSP~~l~~l~~V~~a~~e~ip~~G~Ky~L~FSte~~~~~e~~g~CsA~V~f~-~qkp~P   82 (220)
T PF06907_consen    4 PSHRPAQRAARVAQHYINYRAGSPSRLFVLQQVQKARAEDIPGEGCKYDLVFSTEEYIEGEHLGNCSAEVFFK-NQKPRP   82 (220)
T ss_dssp             TTSHHHHHHHHHHHHHHHHHH-BTTB-EEEEEEEEEEEEEETTTEEEEEEEEEEEETTT---EEEEEEEEEET-T-----
T ss_pred             CcchHHHHHHHHHHHHhccccCCCceeeehhhhhhhhheeccCCCCEEEEEEEhHHhhcCCceeEeEEEEEec-CCCCCC
Confidence            355678899999999999998887   456999999999985  799999999997   45788999999982 222334


Q ss_pred             eEEEeeCCCCCCccc--cccc----ccccCCCCcceeccCC----CHHHHHHHHHHH--HHHHhh--ccCccceeEEEEE
Q 027502          114 LQEFKHAEHGPFSAL--SDLN----LKRGCHGQEWLAVSTN----DLEVKNAANHAV--KSMQRK--SNSLFLYELLEIL  179 (222)
Q Consensus       114 l~s~~c~~~~~~~~~--~~~~----~k~~~~~gg~~~i~~~----d~~v~e~a~fAv--~~~N~~--sn~~~~~~~~kV~  179 (222)
                      -.++.|.......+.  .|..    .|....+---.+||.+    +|+..-+=..|.  ..|=.-  |...-.|....|.
T Consensus        83 ~V~vtc~~~~~k~~~qeeD~~fY~~~k~~~~pl~a~~IPDs~G~i~p~m~P~w~La~v~ssyVmwq~STe~t~Y~maQi~  162 (220)
T PF06907_consen   83 AVNVTCTGLIEKNKRQEEDYAFYQQMKSLKKPLSAQSIPDSHGNIEPEMEPVWHLAIVASSYVMWQKSTENTLYNMAQIK  162 (220)
T ss_dssp             EEEEEECS-------HHHHHHHHHHHHC-SS--EEEEES-TTS---HHHHHHHHHHHHHHHHHHHHH--TT--EEEEEEE
T ss_pred             cEEEEEEeccccCcchhHHHHHHHHHHhhcCccccccCCCCcCCcCccccchhhhhhhheeeEEEeccccceeheeeeec
Confidence            568899876532221  1100    0000000111223221    444444322222  233222  2223356788888


Q ss_pred             Eeeeeee--cceeEEEEEEEEccCCccceEEEE
Q 027502          180 QAKAKVI--EDYAKFELHLKLRRGSEEEKHWVE  210 (222)
Q Consensus       180 ~a~~QVV--aG~~yy~l~l~~~~g~~~~~~~~~  210 (222)
                      +++++--  +-+. |+.+|-+.+-...++--|.
T Consensus       163 sVkQ~kr~DD~i~-FdytVLLHe~~sQEIipc~  194 (220)
T PF06907_consen  163 SVKQWKRNDDFIE-FDYTVLLHEMSSQEIIPCQ  194 (220)
T ss_dssp             EEEEE--SSS-EE-EEEEEEEEETTTTEEEEEE
T ss_pred             ceeeeeeccceee-eceEEEEeecccccceeeE
Confidence            8875533  2334 7888888887777764443

Latexin, a protein possessing inhibitory activity against rat carboxypeptidase A1 (CPA1) and CPA2 (MEROPS peptidase family M14A), is expressed in a neuronal subset in the cerebral cortex and cells in other neural and non-neural tissues of rat [, ]. OCX-32, the 32 kDa eggshell matrix protein, is present at high levels in the uterine fluid during the terminal phase of eggshell formation, and is localised predominantly in the outer eggshell. The timing of OCX-32 secretion into the uterine fluid suggests that it may play a role in the termination of mineral deposition []. OCX-32 protein possesses limited identity (32%) to two unrelated proteins: latexin and to a skin protein that is encoded by a retinoic acid receptor-responsive gene, TIG1. Tazarotene Induced Gene 1 (TIG1) is a putative 228 transmembrane protein with a small N-terminal intracellular region, a single membrane-spanning hydrophobic region, and a large C-terminal extracellular region containing a glycosylation signal. TIG1 is up-regulated by retinoic acid receptor but not by retinoid X receptor-specific synthetic retinoids []. TIG1 may be a tumour suppressor gene whose diminished expression is involved in the malignant progression of prostate cancer [].; PDB: 1WNH_A 2BO9_B.

>TIGR01572 A_thl_para_3677 Arabidopsis paralogous family TIGR01572

Probab=93.01  E-value=6  Score=34.90  Aligned_cols=73  Identities=19%  Similarity=0.204  Sum_probs=59.5

Q ss_pred             HHHHHHHHHHHHHhhcCCceeEEEEEEEEEEeeccEEEEEEEEEEeC---CcceEEEEEEEEecCCCceeeEEEeeC
Q 027502           47 IEGLARFAVQEHNKKENALLQFARVLKAKEQVVAGKLYYLTLEVIDA---GKNKIYEAKIWVKPWINFKQLQEFKHA  120 (222)
Q Consensus        47 v~~~a~fAv~~~N~~sn~~~~~~kV~~a~~QVVaG~nY~l~v~v~~~---~~~~~c~~~V~~~PW~~~~~l~s~~c~  120 (222)
                      ++-.|+.++.-||-..+..+.|..|.+.-.+..+-+.|+||+++-+-   +..+.|+..|.++- .+...|+..-|-
T Consensus        42 vklyAr~GLH~YN~~~GTNlel~~v~K~N~~~~~~~syyITL~A~DP~s~~s~qTFQtrV~e~~-~~~L~ltt~iaR  117 (265)
T TIGR01572        42 VKIYARVGLHRYNFLEGTNLELDHVDKFNKRMCALSSYYITLLAVDPDSRFLQQTFQVRVDEQK-LETLDLTVEIAR  117 (265)
T ss_pred             HHHHHHhhhhhhhhccCccceehhhhhhccchhhheeeeEEEEEecCCccccceEEEEEEEecc-CCcEEEEEEEEe
Confidence            58899999999999998899999999999999999999999999984   46778888887753 234455544443

This model describes a paralogous family of hypothetical proteins in Arabidopsis thaliana. No homologs are detected from other species. Length heterogeneity within the family is attributable partly to a 21-residue repeat present in from zero to three tandem copies. The central region of the repeat resembles the pattern [VIF][FY][QK]GX[LM]P[DEK]XXXDDAL.

>PF00666 Cathelicidins: Cathelicidin; InterPro: IPR001894 The precursor sequences of a number of antimicrobial peptides secreted by neutrophils (polymorphonuclear leukocytes) upon activation have been found to be evolutionarily related and are collectively known as cathelicidins []

Probab=89.58  E-value=0.88  Score=31.96  Aligned_cols=52  Identities=17%  Similarity=0.127  Sum_probs=34.7

Q ss_pred             HHHHHHHHHHHHHhhccCccceeEEEEEEeeeeeec-ce-eEEEEEEEEccCCc
Q 027502          152 VKNAANHAVKSMQRKSNSLFLYELLEILQAKAKVIE-DY-AKFELHLKLRRGSE  203 (222)
Q Consensus       152 v~e~a~fAv~~~N~~sn~~~~~~~~kV~~a~~QVVa-G~-~yy~l~l~~~~g~~  203 (222)
                      ++||+..||..||+++.+.+.|++....---.+... ++ +...++|+-+.|.+
T Consensus         4 Y~eav~~Av~~yN~~s~~~nlfRLLe~~p~P~~~~~~~~~~pl~FtIkETVC~~   57 (67)
T PF00666_consen    4 YEEAVLRAVDFYNQGSSGENLFRLLELDPPPGWDEDPSTPKPLNFTIKETVCPK   57 (67)
T ss_dssp             CHHHHHHHHHHHHHCS-SSEEEEEEEE---SSSSSSSSS-EEEEEEEEEEEEES
T ss_pred             HHHHHHHHHHHHhcCCCccCceeeeeccCCCCCCCCcCcceeeEEEEeeccCCC
Confidence            578999999999999999998888777644444333 23 33456777666554

Structurally, these proteins consist of three domains: a signal sequence, a conserved region of about 100 residues that contains four cysteines involved in two disulphide bonds, and a highly divergent C-terminal section of variable size. It is in this C-terminal section that the antibacterial peptides are found; they are proteolytically processed from their precursor by enzymes such as elastase. This structure is shown in the following schematic representation: +---+--------------------------------+--------------------+ |Sig| Propeptide C C C C | Antibacterial pep. | +---+----------------|--|--|--|------+--------------------+ | | | | +--+ +--+ 'C': conserved cysteine involved in a disulphide bond. ; GO: 0006952 defense response, 0005576 extracellular region; PDB: 1KWI_A 1PFP_A 1LXE_A 1N5P_A 1N5H_A.

>PF06907 Latexin: Latexin; InterPro: IPR009684 This family consists of several animal specific latexin and proteins related to latexin that belong to MEROPS proteinase inhibitor family I47, clan I- []

Probab=83.11  E-value=15  Score=31.56  Aligned_cols=67  Identities=16%  Similarity=0.186  Sum_probs=48.0

Q ss_pred             ccCCCHHHHHHHHHHHHHHHhhccCcc-ceeEEEEEEeeeeeecce--eEEEEEEEEccCC---ccceEEEEEE
Q 027502          145 VSTNDLEVKNAANHAVKSMQRKSNSLF-LYELLEILQAKAKVIEDY--AKFELHLKLRRGS---EEEKHWVEII  212 (222)
Q Consensus       145 i~~~d~~v~e~a~fAv~~~N~~sn~~~-~~~~~kV~~a~~QVVaG~--~yy~l~l~~~~g~---~~~~~~~~v~  212 (222)
                      ++|+.--.++||+-|+-=+|-+..+.+ .|.+.+|.+|+..++.|.  + |+|.+.+.+-.   ...+=.|+|.
T Consensus         2 ~~p~h~~a~rAA~va~hy~N~~~GSP~~l~~l~~V~~a~~e~ip~~G~K-y~L~FSte~~~~~e~~g~CsA~V~   74 (220)
T PF06907_consen    2 INPSHRPAQRAARVAQHYINYRAGSPSRLFVLQQVQKARAEDIPGEGCK-YDLVFSTEEYIEGEHLGNCSAEVF   74 (220)
T ss_dssp             --TTSHHHHHHHHHHHHHHHHHH-BTTB-EEEEEEEEEEEEEETTTEEE-EEEEEEEEETTT---EEEEEEEEE
T ss_pred             CCCcchHHHHHHHHHHHHhccccCCCceeeehhhhhhhhheeccCCCCE-EEEEEEhHHhhcCCceeEeEEEEE
Confidence            456666789999999999999988776 578899999999999765  6 67998888732   2233445554

Latexin, a protein possessing inhibitory activity against rat carboxypeptidase A1 (CPA1) and CPA2 (MEROPS peptidase family M14A), is expressed in a neuronal subset in the cerebral cortex and cells in other neural and non-neural tissues of rat [, ]. OCX-32, the 32 kDa eggshell matrix protein, is present at high levels in the uterine fluid during the terminal phase of eggshell formation, and is localised predominantly in the outer eggshell. The timing of OCX-32 secretion into the uterine fluid suggests that it may play a role in the termination of mineral deposition []. OCX-32 protein possesses limited identity (32%) to two unrelated proteins: latexin and to a skin protein that is encoded by a retinoic acid receptor-responsive gene, TIG1. Tazarotene Induced Gene 1 (TIG1) is a putative 228 transmembrane protein with a small N-terminal intracellular region, a single membrane-spanning hydrophobic region, and a large C-terminal extracellular region containing a glycosylation signal. TIG1 is up-regulated by retinoic acid receptor but not by retinoid X receptor-specific synthetic retinoids []. TIG1 may be a tumour suppressor gene whose diminished expression is involved in the malignant progression of prostate cancer [].; PDB: 1WNH_A 2BO9_B.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	222
3ima_B	91	Complex Strcuture Of Tarocystatin And Papain Length		1e-28
2l4v_A	135	Three Dimensional Structure Of Pineapple Cystatin L		1e-25
1eqk_A	102	Solution Structure Of Oryzacystatin-I, A Cysteine P		1e-22
2w9p_A	87	Crystal Structure Of Potato Multicystatin Length =		6e-19
3ul5_A	139	Saccharum Officinarum Canecystatin-1 In Space Group		2e-18

>pdb|3IMA|B Chain B, Complex Strcuture Of Tarocystatin And Papain Length = 91

Iteration: 1
 Score =  122 bits (307), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 56/85 (65%), Positives = 73/85 (85%)
Query: 33  GGVYDYGGNQNSAEIEGLARFAVQEHNKKENALLQFARVLKAKEQVVAGKLYYLTLEVID 92
           GG+ D  G QNSAE+E LARFAV EHNKKENALLQF+R++KAK+QVV+G +++LT+EVI+
Sbjct: 4   GGIVDVEGAQNSAEVEELARFAVDEHNKKENALLQFSRLVKAKQQVVSGIMHHLTVEVIE 63
Query: 93  AGKNKIYEAKIWVKPWINFKQLQEF 117
            GK K+YEAK+WV+ W+N K+L EF
Sbjct: 64  GGKKKVYEAKVWVQAWLNSKKLHEF 88

>pdb|2L4V|A Chain A, Three Dimensional Structure Of Pineapple Cystatin Length = 135

Iteration: 1
 Score =  112 bits (280), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 54/88 (61%), Positives = 71/88 (80%), Gaps = 1/88 (1%)
Query: 33  GGVYDYG-GNQNSAEIEGLARFAVQEHNKKENALLQFARVLKAKEQVVAGKLYYLTLEVI 91
           GG+YD    N+N  + E LARFAV+E+N K NALL+F RV+KAKEQVV+G ++YLT+EV 
Sbjct: 44  GGIYDAPLNNENGFDKEDLARFAVREYNNKNNALLEFVRVVKAKEQVVSGMMHYLTVEVN 103
Query: 92  DAGKNKIYEAKIWVKPWINFKQLQEFKH 119
           DAGK K+YEAK+W + W+NF+QLQEF +
Sbjct: 104 DAGKKKLYEAKVWEQVWMNFRQLQEFTY 131

>pdb|1EQK|A Chain A, Solution Structure Of Oryzacystatin-I, A Cysteine Proteinase Inhibitor Of The Rice, Oryza Sativa L. Japonica Length = 102

Iteration: 1
 Score =  103 bits (256), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 49/89 (55%), Positives = 65/89 (73%), Gaps = 1/89 (1%)
Query: 33  GGVYDYGGNQNSAEIEGLARFAVQEHNKKENALLQFARVLKAKEQVVAGKLYYLTLEVID 92
           GGV   G N+N   +  LARFAV EHNKK N+LL+F +++  K+QVVAG LYY T+EV +
Sbjct: 10  GGVEPVG-NENDLHLVDLARFAVTEHNKKANSLLEFEKLVSVKQQVVAGTLYYFTIEVKE 68
Query: 93  AGKNKIYEAKIWVKPWINFKQLQEFKHAE 121
               K+YEAK+W KPW++FK+LQEFK  +
Sbjct: 69  GDAKKLYEAKVWEKPWMDFKELQEFKPVD 97

>pdb|2W9P|A Chain A, Crystal Structure Of Potato Multicystatin Length = 87

Iteration: 1
 Score = 90.9 bits (224), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 46/79 (58%), Positives = 60/79 (75%), Gaps = 1/79 (1%)
Query: 41  NQNSAEIEGLARFAVQEHNKKENALLQFARVLKAKEQVVAGKLYYLTLEVI-DAGKNKIY 99
           N N+ + + LARFA+Q++NKK+NA L+F   L  KEQVVAG +YY+TL    DAGK KIY
Sbjct: 7   NPNNTKFQELARFAIQDYNKKQNAHLEFVENLNVKEQVVAGIMYYITLAATDDAGKKKIY 66
Query: 100 EAKIWVKPWINFKQLQEFK 118
           +AKIWVK W +FK++ EFK
Sbjct: 67  KAKIWVKEWEDFKKVVEFK 85

>pdb|3UL5|A Chain A, Saccharum Officinarum Canecystatin-1 In Space Group C2221 Length = 139

Iteration: 1
 Score = 89.0 bits (219), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 43/80 (53%), Positives = 59/80 (73%), Gaps = 1/80 (1%)
Query: 40  GNQNSAEIEGLARFAVQEHNKKENALLQFARVLKAKEQVVAGKLYYLTLEVIDAGKN-KI 98
           G++N  E   LARFAV EHN K NA+L+F R++K + QVVAG +++ T++V +AG   K+
Sbjct: 55  GHENDLEAIELARFAVAEHNSKTNAMLEFERLVKVRHQVVAGTMHHFTVQVKEAGGGKKL 114
Query: 99  YEAKIWVKPWINFKQLQEFK 118
           YEAK+W K W NFKQLQ F+
Sbjct: 115 YEAKVWEKVWENFKQLQSFQ 134

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	222
2l4v_A	135	Cystatin; protease inhibitor, hydrolase inhibitor;	8e-37
3ima_B	91	Cysteine proteinase inhibitor; cystatin, tarocysta	2e-35
1eqk_A	102	Oryzacystatin-I; alpha and beta proteins, cystatin	6e-35
2w9q_A	87	Multicystatin; protease inhibitor, thiol protease	2e-34
3l0r_A	115	Cystatin-2, OMC2; SOFT TICK, protease inhibitor, t	8e-22
2ch9_A	131	Cystatin F; inhibitor, cysteine protease inhibitor	9e-18
2ch9_A	131	Cystatin F; inhibitor, cysteine protease inhibitor	2e-06
3gax_A	120	Cystatin-C; cysteine protease inhibitor, 3D domain	1e-16
3gax_A	120	Cystatin-C; cysteine protease inhibitor, 3D domain	3e-06
3mwz_A	115	Sialostatin L2; antiparallel beta-sheet, hydrolase	3e-16
1roa_A	122	Cystatin D; inhibitor of cysteine pepidases, prote	1e-15
1yvb_I	111	Cystatin; cysteine protease-inhibitor complex, hyd	2e-15
1yvb_I	111	Cystatin; cysteine protease-inhibitor complex, hyd	1e-05
2kxg_A	95	Aspartic protease inhibitor; sqapi, protein, hydro	1e-06

>2l4v_A Cystatin; protease inhibitor, hydrolase inhibitor; NMR {Ananas comosus} Length = 135

 Score =  124 bits (313), Expect = 8e-37
 Identities = 54/93 (58%), Positives = 71/93 (76%), Gaps = 1/93 (1%)

Query: 32  PGGVYDY-GGNQNSAEIEGLARFAVQEHNKKENALLQFARVLKAKEQVVAGKLYYLTLEV 90
            GG+YD    N+N  + E LARFAV+E+N K NALL+F RV+KAKEQVV+G ++YLT+EV
Sbjct: 43  MGGIYDAPLNNENGFDKEDLARFAVREYNNKNNALLEFVRVVKAKEQVVSGMMHYLTVEV 102

Query: 91  IDAGKNKIYEAKIWVKPWINFKQLQEFKHAEHG 123
            DAGK K+YEAK+W + W+NF+QLQEF +    
Sbjct: 103 NDAGKKKLYEAKVWEQVWMNFRQLQEFTYLGDA 135

>3ima_B Cysteine proteinase inhibitor; cystatin, tarocystatin, cecpi, papain, phytocystatin, allergen, disulfide bond, hydrolase, protease; 2.03A {Colocasia esculenta} Length = 91

 Score =  120 bits (301), Expect = 2e-35
 Identities = 56/88 (63%), Positives = 73/88 (82%)

Query: 32  PGGVYDYGGNQNSAEIEGLARFAVQEHNKKENALLQFARVLKAKEQVVAGKLYYLTLEVI 91
            GG+ D  G QNSAE+E LARFAV EHNKKENALLQF+R++KAK+QVV+G +++LT+EVI
Sbjct: 3   MGGIVDVEGAQNSAEVEELARFAVDEHNKKENALLQFSRLVKAKQQVVSGIMHHLTVEVI 62

Query: 92  DAGKNKIYEAKIWVKPWINFKQLQEFKH 119
           + GK K+YEAK+WV+ W+N K+L EF  
Sbjct: 63  EGGKKKVYEAKVWVQAWLNSKKLHEFSP 90

>1eqk_A Oryzacystatin-I; alpha and beta proteins, cystatin-like fold, cystatin/monellin superfamily, phytocystatin family; NMR {Oryza sativa japonica group} SCOP: d.17.1.2 Length = 102

 Score =  118 bits (298), Expect = 6e-35
 Identities = 49/96 (51%), Positives = 65/96 (67%), Gaps = 1/96 (1%)

Query: 29  QMRPGGVYDYGGNQNSAEIEGLARFAVQEHNKKENALLQFARVLKAKEQVVAGKLYYLTL 88
               GGV   G N+N   +  LARFAV EHNKK N+LL+F +++  K+QVVAG LYY T+
Sbjct: 6   GPVLGGVEPVG-NENDLHLVDLARFAVTEHNKKANSLLEFEKLVSVKQQVVAGTLYYFTI 64

Query: 89  EVIDAGKNKIYEAKIWVKPWINFKQLQEFKHAEHGP 124
           EV +    K+YEAK+W KPW++FK+LQEFK  +   
Sbjct: 65  EVKEGDAKKLYEAKVWEKPWMDFKELQEFKPVDASA 100

>2w9q_A Multicystatin; protease inhibitor, thiol protease inhibitor, hydrolase inhibitor; 2.50A {Solanum tuberosum} PDB: 2w9p_A Length = 87

 Score =  116 bits (293), Expect = 2e-34
 Identities = 46/81 (56%), Positives = 60/81 (74%), Gaps = 1/81 (1%)

Query: 40  GNQNSAEIEGLARFAVQEHNKKENALLQFARVLKAKEQVVAGKLYYLTLEVID-AGKNKI 98
            N N+ + + LARFA+Q++NKK+NA L+F   L  KEQVVAG +YY+TL   D AGK KI
Sbjct: 6   PNPNNTKFQELARFAIQDYNKKQNAHLEFVENLNVKEQVVAGIMYYITLAATDDAGKKKI 65

Query: 99  YEAKIWVKPWINFKQLQEFKH 119
           Y+AKIWVK W +FK++ EFK 
Sbjct: 66  YKAKIWVKEWEDFKKVVEFKL 86

>3l0r_A Cystatin-2, OMC2; SOFT TICK, protease inhibitor, thiol protease INHI hydrolase inhibitor; 2.45A {Ornithodoros moubata} Length = 115

 Score = 85.6 bits (211), Expect = 8e-22
 Identities = 26/106 (24%), Positives = 37/106 (34%), Gaps = 21/106 (19%)

Query: 32  PGGVYDYGGNQNSAEIEGLARFAVQEHNKKENALLQFARVLKAKEQVVAGKLYYLTLEVI 91
           PGG      +   A    LA FA     +          V + + QVVAG  Y LT+E+ 
Sbjct: 4   PGGWTR--QDPTEARFLELAHFATSSQTEGREFYDTVVTVKEVETQVVAGMNYKLTIEIS 61

Query: 92  -------------------DAGKNKIYEAKIWVKPWINFKQLQEFK 118
                              DA +     A I+  PW N K +  ++
Sbjct: 62  PSVCKIGEVQYSAEQCVPKDAQQKSTCVAVIYHVPWQNQKSVTSYR 107

>2ch9_A Cystatin F; inhibitor, cysteine protease inhibitor, glycoprotein; HET: NAG FUL; 2.10A {Homo sapiens} Length = 131

 Score = 75.6 bits (185), Expect = 9e-18
 Identities = 24/128 (18%), Positives = 47/128 (36%), Gaps = 27/128 (21%)

Query: 20  GLCREGNFIQMRPGGVYDYGGNQNSAEIEGLARFAVQEHNKKENALLQFA--RVLKAKEQ 77
             C +    +++PG         N   +   AR++V++ N   N +  F   R+ +A  Q
Sbjct: 5   DTCSQDLNSRVKPGFPKTI--KTNDPGVLQAARYSVEKFNNCTNDMFLFKESRITRALVQ 62

Query: 78  VVAGKLYYLTLEVI---------------------DAGKNKIYEAKIWVKPWINFKQLQE 116
           +V G  Y L +E+                         +     +++WV PW+   ++  
Sbjct: 63  IVKGLKYMLEVEIGRTTCKKNQHLRLDDCDFQTNHTLKQTLSCYSEVWVVPWLQHFEVPV 122

Query: 117 FK--HAEH 122
            +  H  H
Sbjct: 123 LRCHHHHH 130

>2ch9_A Cystatin F; inhibitor, cysteine protease inhibitor, glycoprotein; HET: NAG FUL; 2.10A {Homo sapiens} Length = 131

 Score = 45.2 bits (106), Expect = 2e-06
 Identities = 15/59 (25%), Positives = 32/59 (54%), Gaps = 1/59 (1%)

Query: 142 WLAVSTNDLEVKNAANHAVKSMQRKSNSLFLYELLEILQAKAKVIEDYAKFELHLKLRR 200
              + TND  V  AA ++V+     +N +FL++   I +A  ++++   K+ L +++ R
Sbjct: 20  PKTIKTNDPGVLQAARYSVEKFNNCTNDMFLFKESRITRALVQIVKG-LKYMLEVEIGR 77

>3gax_A Cystatin-C; cysteine protease inhibitor, 3D domain swapping, protein AGG amyloid, protein engineering, twinning; 1.70A {Homo sapiens} PDB: 1g96_A 1tij_A 3qrd_A 3ps8_A 3nx0_A 1r4c_A Length = 120

 Score = 72.5 bits (177), Expect = 1e-16
 Identities = 23/109 (21%), Positives = 40/109 (36%), Gaps = 24/109 (22%)

Query: 32  PGGVYDYGGNQNSAEIEGLARFAVQEHNKKENALLQFA--RVLKAKEQVVAGKLYYLTLE 89
            GG  D   +     +     FAV E+NK  N +      +V++A++Q+VAG  Y+L +E
Sbjct: 10  VGGPMDA--SVEEEGVRRALDFAVGEYNKASNDMYHSRACQVVRARKQIVAGVNYFLDVE 67

Query: 90  V--------------------IDAGKNKIYEAKIWVKPWINFKQLQEFK 118
           +                        +      +I+  PW     L +  
Sbjct: 68  LCRTTCTKTQPNLDNCPFHDQPHLKRKAFCSFQIYAVPWQGTMTLSKST 116

>3gax_A Cystatin-C; cysteine protease inhibitor, 3D domain swapping, protein AGG amyloid, protein engineering, twinning; 1.70A {Homo sapiens} PDB: 1g96_A 1tij_A 3qrd_A 3ps8_A 3nx0_A 1r4c_A Length = 120

 Score = 44.0 bits (103), Expect = 3e-06
 Identities = 11/59 (18%), Positives = 29/59 (49%), Gaps = 1/59 (1%)

Query: 142 WLAVSTNDLEVKNAANHAVKSMQRKSNSLFLYELLEILQAKAKVIEDYAKFELHLKLRR 200
            +  S  +  V+ A + AV    + SN ++     ++++A+ +++     + L ++L R
Sbjct: 13  PMDASVEEEGVRRALDFAVGEYNKASNDMYHSRACQVVRARKQIV-AGVNYFLDVELCR 70

>3mwz_A Sialostatin L2; antiparallel beta-sheet, hydrolase inhibitor; HET: MSE; 1.52A {Ixodes scapularis} PDB: 3lh4_A 3li7_A Length = 115

 Score = 71.2 bits (174), Expect = 3e-16
 Identities = 22/108 (20%), Positives = 39/108 (36%), Gaps = 23/108 (21%)

Query: 32  PGGVYDYGGNQNSAEIEGLARFAVQEHNKKENALLQF---ARVLKAKEQVVAGKLYYLTL 88
            GG  +   NQ+  E   +A +A    + ++     F     V+K + Q VAG  Y LTL
Sbjct: 6   RGGYRERS-NQDDPEYLEMAHYATSTWSAQQPGKTHFDTVVEVMKVETQTVAGTNYRLTL 64

Query: 89  EVIDA------------------GKNKIYEAKIWVKPWINFKQLQEFK 118
           +V ++                     +     I+ +     K +  F+
Sbjct: 65  KVAESTCELTSTYNKDTCQANANAAQRTCTTVIY-RNMQGEKSINSFE 111

>1roa_A Cystatin D; inhibitor of cysteine pepidases, protein binding; 1.80A {Homo sapiens} SCOP: d.17.1.2 PDB: 1rn7_A Length = 122

 Score = 69.9 bits (170), Expect = 1e-15
 Identities = 21/110 (19%), Positives = 39/110 (35%), Gaps = 25/110 (22%)

Query: 32  PGGVYDYGGNQNSAEIEGLARFAVQEHNKKENA---LLQFARVLKAKEQVVAGKLYYLTL 88
            GG++    + N   ++    FA+ E+NK  N      +  +V+ A +Q+V G  YY  +
Sbjct: 11  AGGIHAT--DLNDKSVQRALDFAISEYNKVINKDEYYSRPLQVMAAYQQIVGGVNYYFNV 68

Query: 89  EVIDAGKNKIYE--------------------AKIWVKPWINFKQLQEFK 118
           +       K                        +I   PW +   +  +K
Sbjct: 69  KFGRTTCTKSQPNLDNCPFNDQPKLKEEEFCSFQINEVPWEDKISILNYK 118

>1yvb_I Cystatin; cysteine protease-inhibitor complex, hydrolase-hydrolase INH complex; 2.70A {Gallus gallus} SCOP: d.17.1.2 PDB: 1a67_A 1cew_I 1a90_A Length = 111

 Score = 69.0 bits (168), Expect = 2e-15
 Identities = 24/110 (21%), Positives = 43/110 (39%), Gaps = 24/110 (21%)

Query: 31  RPGGVYDYGGNQNSAEIEGLARFAVQEHNKKENA--LLQFARVLKAKEQVVAGKLYYLTL 88
             G       ++N   ++   +FA+ E+N+  N     +  RV+ AK Q+V+G  Y L +
Sbjct: 2   LLGAPVPV--DENDEGLQRALQFAMAEYNRASNDKYSSRVVRVISAKRQLVSGIKYILQV 59

Query: 89  EV--------------------IDAGKNKIYEAKIWVKPWINFKQLQEFK 118
           E+                     +  K       ++  PW+N  +L E K
Sbjct: 60  EIGRTTCPKSSGDLQSCEFHDEPEMAKYTTCTFVVYSIPWLNQIKLLESK 109

>1yvb_I Cystatin; cysteine protease-inhibitor complex, hydrolase-hydrolase INH complex; 2.70A {Gallus gallus} SCOP: d.17.1.2 PDB: 1a67_A 1cew_I 1a90_A Length = 111

 Score = 42.1 bits (98), Expect = 1e-05
 Identities = 13/59 (22%), Positives = 29/59 (49%), Gaps = 1/59 (1%)

Query: 142 WLAVSTNDLEVKNAANHAVKSMQRKSNSLFLYELLEILQAKAKVIEDYAKFELHLKLRR 200
            + V  ND  ++ A   A+    R SN  +   ++ ++ AK +++    K+ L +++ R
Sbjct: 6   PVPVDENDEGLQRALQFAMAEYNRASNDKYSSRVVRVISAKRQLVSGI-KYILQVEIGR 63

>2kxg_A Aspartic protease inhibitor; sqapi, protein, hydrolase inhib; NMR {Cucurbita maxima} Length = 95

 Score = 44.8 bits (105), Expect = 1e-06
 Identities = 20/88 (22%), Positives = 34/88 (38%), Gaps = 12/88 (13%)

Query: 39  GGNQNSAEIEGLARFAVQEHNKKENALLQFARVLKAKEQVVAGKL-----YYLTLEVID- 92
           G + N   ++ +A FA+++H ++    L  A V     Q++ G       Y L L     
Sbjct: 11  GISVNDPRVKEIAEFALKQHAEQN---LILAGVDAG--QIIKGIPHWDNYYNLILSAKHS 65

Query: 93  -AGKNKIYEAKIWVKPWINFKQLQEFKH 119
               +K Y   +  K   N  +L  F  
Sbjct: 66  PHEFSKFYNVVVLEKASDNSLKLVAFVP 93

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	222
1eqk_A	102	Oryzacystatin-I; alpha and beta proteins, cystatin	99.96
3ima_B	91	Cysteine proteinase inhibitor; cystatin, tarocysta	99.95
3ul5_A	139	Canecystatin-1; defense, hydrolase inhibitor; 2.30	99.94
2l4v_A	135	Cystatin; protease inhibitor, hydrolase inhibitor;	99.94
2w9q_A	87	Multicystatin; protease inhibitor, thiol protease	99.93
1yvb_I	111	Cystatin; cysteine protease-inhibitor complex, hyd	99.92
3gax_A	120	Cystatin-C; cysteine protease inhibitor, 3D domain	99.92
1roa_A	122	Cystatin D; inhibitor of cysteine pepidases, prote	99.91
2kxg_A	95	Aspartic protease inhibitor; sqapi, protein, hydro	99.91
2o9u_X	97	Monellin chain B and monellin chain A; alternative	99.9
3l0r_A	115	Cystatin-2, OMC2; SOFT TICK, protease inhibitor, t	99.9
2ch9_A	131	Cystatin F; inhibitor, cysteine protease inhibitor	99.9
3mwz_A	115	Sialostatin L2; antiparallel beta-sheet, hydrolase	99.89
3ima_B	91	Cysteine proteinase inhibitor; cystatin, tarocysta	99.84
3ul5_A	139	Canecystatin-1; defense, hydrolase inhibitor; 2.30	99.82
1eqk_A	102	Oryzacystatin-I; alpha and beta proteins, cystatin	99.81
2kxg_A	95	Aspartic protease inhibitor; sqapi, protein, hydro	99.8
3mwz_A	115	Sialostatin L2; antiparallel beta-sheet, hydrolase	99.8
1yvb_I	111	Cystatin; cysteine protease-inhibitor complex, hyd	99.79
2oct_A	98	Cystatin B; stefin, amyloid, domain-swapping, hand	99.79
3gax_A	120	Cystatin-C; cysteine protease inhibitor, 3D domain	99.78
2l4v_A	135	Cystatin; protease inhibitor, hydrolase inhibitor;	99.78
1cyu_A	98	Cystatin A, stefin A; proteinase inhibitor (cystei	99.78
1roa_A	122	Cystatin D; inhibitor of cysteine pepidases, prote	99.76
2w9q_A	87	Multicystatin; protease inhibitor, thiol protease	99.76
2ch9_A	131	Cystatin F; inhibitor, cysteine protease inhibitor	99.75
3l0r_A	115	Cystatin-2, OMC2; SOFT TICK, protease inhibitor, t	99.74
1cyu_A	98	Cystatin A, stefin A; proteinase inhibitor (cystei	99.74
2o9u_X	97	Monellin chain B and monellin chain A; alternative	99.73
2oct_A	98	Cystatin B; stefin, amyloid, domain-swapping, hand	99.67
2bo9_B	222	Human latexin, MUM; metallocarboxypeptidase, X-RAY	96.25
1kwi_A	101	Protegrin-3 precursor; cathelicidin motif, disulfi	93.05
1kwi_A	101	Protegrin-3 precursor; cathelicidin motif, disulfi	91.31
2bo9_B	222	Human latexin, MUM; metallocarboxypeptidase, X-RAY	80.03

>1eqk_A Oryzacystatin-I; alpha and beta proteins, cystatin-like fold, cystatin/monellin superfamily, phytocystatin family; NMR {Oryza sativa japonica group} SCOP: d.17.1.2

Probab=99.96  E-value=3.6e-28  Score=183.29  Aligned_cols=95  Identities=52%  Similarity=0.890  Sum_probs=90.1

Q ss_pred             ccCCceeeeCCCCCCCHHHHHHHHHHHHHHHhhcCCceeEEEEEEEEEEeeccEEEEEEEEEEeCCcceEEEEEEEEecC
Q 027502           29 QMRPGGVYDYGGNQNSAEIEGLARFAVQEHNKKENALLQFARVLKAKEQVVAGKLYYLTLEVIDAGKNKIYEAKIWVKPW  108 (222)
Q Consensus        29 ~~l~GG~~~i~~~~~d~~v~~~a~fAv~~~N~~sn~~~~~~kV~~a~~QVVaG~nY~l~v~v~~~~~~~~c~~~V~~~PW  108 (222)
                      .+++|||++++ +.+||+++++++||+.+||+++|+.|.|.+|++|++|||+|+||+|+++++++++...|+++||++||
T Consensus         6 ~~~~GG~~~~~-~~~~~~v~~~a~~Av~~~n~~~n~~~~~~~Vv~a~~QVVaG~~Y~l~v~~~~~~~~~~c~~~V~~~PW   84 (102)
T 1eqk_A            6 GPVLGGVEPVG-NENDLHLVDLARFAVTEHNKKANSLLEFEKLVSVKQQVVAGTLYYFTIEVKEGDAKKLYEAKVWEKPW   84 (102)
T ss_dssp             CSCSSSSEEEC-CTTCHHHHHHHHHHHHHHHHHTTCCEEEEEEEEEEEEESSSEEEEEEEEEEETTCCEEEEEEEEEBTT
T ss_pred             CCCCcccccCC-CCCCHHHHHHHHHHHHHHHhhcCCceEEEEEEEEEEEEeccEEEEEEEEEecCCCcEEEEEEEEEeeC
Confidence            56899999975 36999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCceeeEEEeeCCCCC
Q 027502          109 INFKQLQEFKHAEHGP  124 (222)
Q Consensus       109 ~~~~~l~s~~c~~~~~  124 (222)
                      +++++|++|+|.++.|
T Consensus        85 ~~~~~l~~f~c~~~~~  100 (102)
T 1eqk_A           85 MDFKELQEFKPVDASA  100 (102)
T ss_dssp             TTBCCEEEEECCCCCC
T ss_pred             CCceEEEEEEcCCCCC
Confidence            9999999999998754

>3ima_B Cysteine proteinase inhibitor; cystatin, tarocystatin, cecpi, papain, phytocystatin, allergen, disulfide bond, hydrolase, protease; 2.03A {Colocasia esculenta} SCOP: d.17.1.0

Probab=99.95  E-value=3.7e-28  Score=179.80  Aligned_cols=89  Identities=63%  Similarity=0.981  Sum_probs=81.3

Q ss_pred             CCceeeeCCCCCCCHHHHHHHHHHHHHHHhhcCCceeEEEEEEEEEEeeccEEEEEEEEEEeCCcceEEEEEEEEecCCC
Q 027502           31 RPGGVYDYGGNQNSAEIEGLARFAVQEHNKKENALLQFARVLKAKEQVVAGKLYYLTLEVIDAGKNKIYEAKIWVKPWIN  110 (222)
Q Consensus        31 l~GG~~~i~~~~~d~~v~~~a~fAv~~~N~~sn~~~~~~kV~~a~~QVVaG~nY~l~v~v~~~~~~~~c~~~V~~~PW~~  110 (222)
                      |+|||++++++.+||+++++|+||+.+||+++|+.|.|.+|++|++|||+|+||+|++++.++++...|++.||++||++
T Consensus         2 ~~GG~~~~~~~~~d~~v~~~a~fav~~~n~~~n~~~~~~~Vv~a~~QVVaG~nY~l~v~~~~~~~~~~y~a~V~~~pW~~   81 (91)
T 3ima_B            2 LMGGIVDVEGAQNSAEVEELARFAVDEHNKKENALLQFSRLVKAKQQVVSGIMHHLTVEVIEGGKKKVYEAKVWVQAWLN   81 (91)
T ss_dssp             CBTCEEC------CHHHHHHHHHHHHHHHHHHTCCCEEEEEEEEEEEESSSEEEEEEEEEEETTEEEEEEEEEEEEGGGT
T ss_pred             CCcccccCcCCCCCHHHHHHHHHHHHHHHHhcCCceEEEEEEEEEEEEeccEEEEEEEEEecCCceEEEEEEEEEeeCCC
Confidence            78999999423799999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ceeeEEEee
Q 027502          111 FKQLQEFKH  119 (222)
Q Consensus       111 ~~~l~s~~c  119 (222)
                      +++|++|++
T Consensus        82 ~~~l~~F~~   90 (91)
T 3ima_B           82 SKKLHEFSP   90 (91)
T ss_dssp             EEEEEEEEC
T ss_pred             cEEEEEEEe
Confidence            999999986

>3ul5_A Canecystatin-1; defense, hydrolase inhibitor; 2.30A {Saccharum officinarum} PDB: 3ul6_A*

Probab=99.94  E-value=9.4e-27  Score=184.37  Aligned_cols=97  Identities=46%  Similarity=0.694  Sum_probs=78.2

Q ss_pred             CCcccCCceeeeCC-CCCCCHHHHHHHHHHHHHHHhhcCCceeEEEEEEEEEEeeccEEEEEEEEEEe-CCcceEEEEEE
Q 027502           26 NFIQMRPGGVYDYG-GNQNSAEIEGLARFAVQEHNKKENALLQFARVLKAKEQVVAGKLYYLTLEVID-AGKNKIYEAKI  103 (222)
Q Consensus        26 ~~~~~l~GG~~~i~-~~~~d~~v~~~a~fAv~~~N~~sn~~~~~~kV~~a~~QVVaG~nY~l~v~v~~-~~~~~~c~~~V  103 (222)
                      .+...++|||++++ ++++||+++++|+||+.+||+++|+.|.|.+|++|++|||+|+||+|+|++.+ +++...|+++|
T Consensus        40 ~~~~~~~GG~~~i~~~~~ndpeVqela~fAV~e~Nkksn~~l~~~kVv~a~sQVVAG~nY~L~V~a~d~~g~~~~y~a~V  119 (139)
T 3ul5_A           40 GRRVGMVGDVRDAPAGHENDLEAIELARFAVAEHNSKTNAMLEFERLVKVRHQVVAGTMHHFTVQVKEAGGGKKLYEAKV  119 (139)
T ss_dssp             ----------------CTTCHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEEEEEEEEEEEEEEEEECSSCCEEEEEEEE
T ss_pred             cCCCCCCCCcccccCCCCCCHHHHHHHHHHHHHHHHhCCCceeEEEEEEEEEEEecCEEEEEEEEEecCCCCeEEEEEEE
Confidence            34566899999992 22799999999999999999999999999999999999999999999999999 88999999999


Q ss_pred             EEecCCCceeeEEEeeCCC
Q 027502          104 WVKPWINFKQLQEFKHAEH  122 (222)
Q Consensus       104 ~~~PW~~~~~l~s~~c~~~  122 (222)
                      |++||+++++|++|++..+
T Consensus       120 wekPW~n~k~L~sF~p~~~  138 (139)
T 3ul5_A          120 WEKVWENFKQLQSFQPVGD  138 (139)
T ss_dssp             EEETTTTEEEEEEEEECC-
T ss_pred             EEeeCCCceEEEEEEEcCC
Confidence            9999999999999998864

>2l4v_A Cystatin; protease inhibitor, hydrolase inhibitor; NMR {Ananas comosus}

Probab=99.94  E-value=2.3e-26  Score=181.83  Aligned_cols=94  Identities=57%  Similarity=0.889  Sum_probs=89.3

Q ss_pred             ccCCceeeeCC-CCCCCHHHHHHHHHHHHHHHhhcCCceeEEEEEEEEEEeeccEEEEEEEEEEeCCcceEEEEEEEEec
Q 027502           29 QMRPGGVYDYG-GNQNSAEIEGLARFAVQEHNKKENALLQFARVLKAKEQVVAGKLYYLTLEVIDAGKNKIYEAKIWVKP  107 (222)
Q Consensus        29 ~~l~GG~~~i~-~~~~d~~v~~~a~fAv~~~N~~sn~~~~~~kV~~a~~QVVaG~nY~l~v~v~~~~~~~~c~~~V~~~P  107 (222)
                      .+++|||++++ ++.+|++++++++||+.+||+++|+.|.|.+|+++++|||+|+||+|+++++++++.+.|+++||++|
T Consensus        40 ~~~~GG~~~i~~~~~nd~evqe~a~fAv~e~N~~sn~~~~f~kVv~a~~QVVAG~nY~l~vev~~~~~~~~c~a~Vw~kP  119 (135)
T 2l4v_A           40 HPIMGGIYDAPLNNENGFDKEDLARFAVREYNNKNNALLEFVRVVKAKEQVVSGMMHYLTVEVNDAGKKKLYEAKVWEQV  119 (135)
T ss_dssp             CCCCCCSSCCCCTTTTSHHHHHHHHHHHHHHHHHTSCCCEEEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEEECS
T ss_pred             CCCCCccCcCCCCCCCCHHHHHHHHHHHHHHHhhcCCceEEEEEEEEEEEEecCEEEEEEEEEecCCceEEEEEEEEEec
Confidence            66899999997 34689999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCceeeEEEeeCCC
Q 027502          108 WINFKQLQEFKHAEH  122 (222)
Q Consensus       108 W~~~~~l~s~~c~~~  122 (222)
                      |+++++|++|+|..+
T Consensus       120 W~n~~~L~~f~~~~~  134 (135)
T 2l4v_A          120 WMNFRQLQEFTYLGD  134 (135)
T ss_dssp             SSCCEEEEEEEECSC
T ss_pred             CCCceEEEEEEecCC
Confidence            999999999999864

>2w9q_A Multicystatin; protease inhibitor, thiol protease inhibitor, hydrolase inhibitor; 2.50A {Solanum tuberosum} PDB: 2w9p_A

Probab=99.93  E-value=5.4e-25  Score=161.16  Aligned_cols=86  Identities=55%  Similarity=0.894  Sum_probs=80.8

Q ss_pred             eeeeCCCCCCCHHHHHHHHHHHHHHHhhcCCceeEEEEEEEEEEeeccEEEEEEEEEEe-CCcceEEEEEEEEecCCCce
Q 027502           34 GVYDYGGNQNSAEIEGLARFAVQEHNKKENALLQFARVLKAKEQVVAGKLYYLTLEVID-AGKNKIYEAKIWVKPWINFK  112 (222)
Q Consensus        34 G~~~i~~~~~d~~v~~~a~fAv~~~N~~sn~~~~~~kV~~a~~QVVaG~nY~l~v~v~~-~~~~~~c~~~V~~~PW~~~~  112 (222)
                      ||+++. +++||+++++|+||+.+||+++|+.+++.+|++|++|||+|+||+|++++++ +++...|+++||++||++++
T Consensus         1 G~~~~~-~~~d~~v~~~~~fAv~~~n~~~n~~~~~~~vv~a~~QVVaG~~Y~l~v~~~~~~~~~~~c~~~V~~~PW~~~~   79 (87)
T 2w9q_A            1 GIVNVP-NPNNTKFQELARFAIQDYNKKQNAHLEFVENLNVKEQVVAGIMYYITLAATDDAGKKKIYKAKIWVKEWEDFK   79 (87)
T ss_dssp             CCEECS-STTSHHHHHHHHHHHHHHHHHHTCCEEEEEEEEEEEEESSSEEEEEEEEEEETTTEEEEEEEEEEEEGGGTEE
T ss_pred             CcccCC-CCCCHHHHHHHHHHHHHHHhhcCCceEEEEEEEEEEEEeccEEEEEEEEEecCCCCeEEEEEEEEEeeCCCce
Confidence            788986 3799999999999999999999999999999999999999999999999998 57788999999999999999


Q ss_pred             eeEEEeeC
Q 027502          113 QLQEFKHA  120 (222)
Q Consensus       113 ~l~s~~c~  120 (222)
                      +|++|++.
T Consensus        80 ~l~~f~~~   87 (87)
T 2w9q_A           80 KVVEFKLV   87 (87)
T ss_dssp             EEEEEEEC
T ss_pred             EEEeeccC
Confidence            99999863

>1yvb_I Cystatin; cysteine protease-inhibitor complex, hydrolase-hydrolase INH complex; 2.70A {Gallus gallus} SCOP: d.17.1.2 PDB: 1a67_A 1cew_I 1a90_A

Probab=99.92  E-value=8.7e-25  Score=166.27  Aligned_cols=89  Identities=27%  Similarity=0.379  Sum_probs=83.6

Q ss_pred             cCCceeeeCCCCCCCHHHHHHHHHHHHHHHhhcCCce--eEEEEEEEEEEeeccEEEEEEEEEEeC--------------
Q 027502           30 MRPGGVYDYGGNQNSAEIEGLARFAVQEHNKKENALL--QFARVLKAKEQVVAGKLYYLTLEVIDA--------------   93 (222)
Q Consensus        30 ~l~GG~~~i~~~~~d~~v~~~a~fAv~~~N~~sn~~~--~~~kV~~a~~QVVaG~nY~l~v~v~~~--------------   93 (222)
                      +|+|||++++  .+||+++++|+||+.+||+++|+.+  ++.+|++|++|||+|++|+|+++++++              
T Consensus         1 ~~~Gg~~~~~--~~d~~v~~~~~~av~~~N~~s~~~~~~~l~~v~~a~~QvVaG~~y~l~v~v~~t~C~k~~~~~~~C~~   78 (111)
T 1yvb_I            1 RLLGAPVPVD--ENDEGLQRALQFAMAEYNRASNDKYSSRVVRVISAKRQLVSGIKYILQVEIGRTTCPKSSGDLQSCEF   78 (111)
T ss_dssp             CCTTCEECCC--TTCHHHHHHHHHHHHHHHHHCCCSSCEEEEEECCCEEEESSSEEEEEEEEEEEBSSCSSSSCSSCCCB
T ss_pred             CCCCCceECC--CCCHHHHHHHHHHHHHHHHhCCCcceeEEEEEEEEEEEEECCeEEEEEEEEEccccCCCCCCcccCCC
Confidence            4799999997  6999999999999999999999986  889999999999999999999999986              


Q ss_pred             ------CcceEEEEEEEEecCCCceeeEEEeeC
Q 027502           94 ------GKNKIYEAKIWVKPWINFKQLQEFKHA  120 (222)
Q Consensus        94 ------~~~~~c~~~V~~~PW~~~~~l~s~~c~  120 (222)
                            ++...|+++||.+||+++++|++++|.
T Consensus        79 ~~~~~~~~~~~C~~~V~~~pW~~~~~l~~~~C~  111 (111)
T 1yvb_I           79 HDEPEMAKYTTCTFVVYSIPWLNQIKLLESKCQ  111 (111)
T ss_dssp             CSSTTTSCCEEEEEEEEEEGGGTEEEEEEEEEC
T ss_pred             CCCcccccccEEEEEEEecCCCCccEeeccccC
Confidence                  357899999999999999999999994

>3gax_A Cystatin-C; cysteine protease inhibitor, 3D domain swapping, protein AGG amyloid, protein engineering, twinning; 1.70A {Homo sapiens} SCOP: d.17.1.2 PDB: 1g96_A 1tij_A 3qrd_A 3ps8_A 3nx0_A 3sva_A 3s67_A 1r4c_A

Probab=99.92  E-value=1.4e-24  Score=167.84  Aligned_cols=95  Identities=24%  Similarity=0.370  Sum_probs=80.9

Q ss_pred             CCCcccCCceeeeCCCCCCCHHHHHHHHHHHHHHHhhcCCc--eeEEEEEEEEEEeeccEEEEEEEEEEeC---------
Q 027502           25 GNFIQMRPGGVYDYGGNQNSAEIEGLARFAVQEHNKKENAL--LQFARVLKAKEQVVAGKLYYLTLEVIDA---------   93 (222)
Q Consensus        25 ~~~~~~l~GG~~~i~~~~~d~~v~~~a~fAv~~~N~~sn~~--~~~~kV~~a~~QVVaG~nY~l~v~v~~~---------   93 (222)
                      +..+++|+|||++++  .+||+++++|+||+.+||+++++.  |++.+|++|++|||+|++|+|+++++++         
T Consensus         3 ~~~~~~~~Gg~~~~~--~~d~~v~~~a~~av~~~N~~sn~~~~~~~~~v~~a~~QvVaG~~Y~l~v~v~~t~C~K~~~~~   80 (120)
T 3gax_A            3 PGKPPRLVGGPMDAS--VEEEGVRRALDFAVGEYNKASNDMYHSRACQVVRARKQIVAGVNYFLDVELCRTTCTKTQPNL   80 (120)
T ss_dssp             ---------CCEEEC--TTSHHHHHHHHHHHHHHHHHCCCSEEEEEEEEEEEEEEESSSEEEEEEEEEEEEEEESCC--C
T ss_pred             CcccCccCCCCEeCC--CCCHHHHHHHHHHHHHHHhccCCcceeeEEEEEEEEEEEecCeEEEEEEEEEeeeccCCCCCc
Confidence            345578999999998  699999999999999999999998  7889999999999999999999999974         


Q ss_pred             -----------CcceEEEEEEEEecCCCceeeEEEeeCC
Q 027502           94 -----------GKNKIYEAKIWVKPWINFKQLQEFKHAE  121 (222)
Q Consensus        94 -----------~~~~~c~~~V~~~PW~~~~~l~s~~c~~  121 (222)
                                 ++...|+++||.+||+++++|++++|.+
T Consensus        81 ~~C~~~~~~~~~~~~~C~~~V~~~PW~~~~~l~~~~C~~  119 (120)
T 3gax_A           81 DNCPFHDQPHLKRKAFCSFQIYAVPWQGTMTLSKSTCQD  119 (120)
T ss_dssp             CCCCBCSSHHHHCCEEEEEEEEEETTTTEEEEEEEEEEE
T ss_pred             ccCCCcCCccccCceEEEEEEEecCCCCeEEeccceecC
Confidence                       3578999999999999999999999964

>1roa_A Cystatin D; inhibitor of cysteine pepidases, protein binding; 1.80A {Homo sapiens} SCOP: d.17.1.2 PDB: 1rn7_A

Probab=99.91  E-value=5.4e-24  Score=164.86  Aligned_cols=91  Identities=21%  Similarity=0.329  Sum_probs=81.2

Q ss_pred             cc-CCceeeeCCCCCCCHHHHHHHHHHHHHHHhh-cCCce--eEEEEEEEEEEeeccEEEEEEEEEEeCC----------
Q 027502           29 QM-RPGGVYDYGGNQNSAEIEGLARFAVQEHNKK-ENALL--QFARVLKAKEQVVAGKLYYLTLEVIDAG----------   94 (222)
Q Consensus        29 ~~-l~GG~~~i~~~~~d~~v~~~a~fAv~~~N~~-sn~~~--~~~kV~~a~~QVVaG~nY~l~v~v~~~~----------   94 (222)
                      +. |+|||++++  .+||+++++|+||+.+||++ +|+.+  ++.+|++|++|||+|+||+|+++++++.          
T Consensus         7 ~~~~~Gg~~~~~--~~d~~v~~~a~~Av~~~N~~~s~~~~~~~l~~v~~a~~QVVaG~~Y~l~v~v~~t~C~k~~~~~~~   84 (122)
T 1roa_A            7 SRTLAGGIHATD--LNDKSVQRALDFAISEYNKVINKDEYYSRPLQVMAAYQQIVGGVNYYFNVKFGRTTCTKSQPNLDN   84 (122)
T ss_dssp             -----CCEEEEC--TTSHHHHHHHHHHHHHHHHTTCCCSEEEEEEEEEEEEEEETTEEEEEEEEEEEEEEEETTSSCCSS
T ss_pred             cCcCCCCCeECC--CCCHHHHHHHHHHHHHHHhcccCCCceeEEEEEEEEEEEEECCeEEEEEEEEEccccCCCCCCccc
Confidence            44 899999997  69999999999999999999 99986  5599999999999999999999999863          


Q ss_pred             ----------cceEEEEEEEEecCCCceeeEEEeeCC
Q 027502           95 ----------KNKIYEAKIWVKPWINFKQLQEFKHAE  121 (222)
Q Consensus        95 ----------~~~~c~~~V~~~PW~~~~~l~s~~c~~  121 (222)
                                +...|+++||.+||+++++|++++|.+
T Consensus        85 C~~~~~~~~~~~~~C~~~V~~~PW~~~~~l~~~~C~~  121 (122)
T 1roa_A           85 CPFNDQPKLKEEEFCSFQINEVPWEDKISILNYKCRK  121 (122)
T ss_dssp             CCBCCSTTCCCCEEEEEEEEEETTTTEEEEEEEEEEE
T ss_pred             CCCCCCcccccceEEEEEEEecccCCccEECcccccC
Confidence                      478999999999999999999999963

>2kxg_A Aspartic protease inhibitor; sqapi, protein, hydrolase inhib; NMR {Cucurbita maxima}

Probab=99.91  E-value=6.2e-24  Score=158.34  Aligned_cols=85  Identities=25%  Similarity=0.301  Sum_probs=80.1

Q ss_pred             ccCCceeeeCCCCCCCHHHHHHHHHHHHHHHhhcCCceeEEEEEEEEEEeeccE-----EEEEEEEEEeC--CcceEEEE
Q 027502           29 QMRPGGVYDYGGNQNSAEIEGLARFAVQEHNKKENALLQFARVLKAKEQVVAGK-----LYYLTLEVIDA--GKNKIYEA  101 (222)
Q Consensus        29 ~~l~GG~~~i~~~~~d~~v~~~a~fAv~~~N~~sn~~~~~~kV~~a~~QVVaG~-----nY~l~v~v~~~--~~~~~c~~  101 (222)
                      ..++|||++++  +|||+++++|+||+.+||++   .+.|++|++|  |||+|+     ||+|++++.++  ++...|++
T Consensus         3 ~~~~Gg~~~i~--~nd~~v~e~a~fAv~e~N~~---~l~~~~Vv~a--QVVaG~~~~~~~Y~L~l~~~~~~~~~~~~y~a   75 (95)
T 2kxg_A            3 GPAIGEVIGIS--VNDPRVKEIAEFALKQHAEQ---NLILAGVDAG--QIIKGIPHWDNYYNLILSAKHSPHEFSKFYNV   75 (95)
T ss_dssp             CCSSCCCCCCC--TTCHHHHHHHHHHHHHCCTT---CCEEEEEEEE--EEECSSCSSCCEEEEEEEEESCTTSCCEEEEE
T ss_pred             CCCCCcceECC--CCCHHHHHHHHHHHHHHHhh---CcEEEEEEEE--eEecCccccCccEEEEEEEecCCCCCceEEEE
Confidence            45799999996  79999999999999999987   6999999999  999999     99999999998  88899999


Q ss_pred             EEEEecCCCceeeEEEeeC
Q 027502          102 KIWVKPWINFKQLQEFKHA  120 (222)
Q Consensus       102 ~V~~~PW~~~~~l~s~~c~  120 (222)
                      +||++||+++++|++|++.
T Consensus        76 ~Vw~kpW~n~~~L~sF~~~   94 (95)
T 2kxg_A           76 VVLEKASDNSLKLVAFVPL   94 (95)
T ss_dssp             EEEEETTTTEEEEEEEEEC
T ss_pred             EEEEccCCCcEEEEEeEec
Confidence            9999999999999999864

>2o9u_X Monellin chain B and monellin chain A; alternative conformations, 3-10 polyproline II helix, plant protein; 1.15A {Dioscoreophyllum cumminsii} SCOP: d.17.1.1 PDB: 3pxm_A 1m9g_A 3pyj_A 1fa3_A 1iv7_A 3q2p_A 1iv9_A 1mnl_A 1mol_A 1fuw_A 4mon_B 3mon_B 1krl_B 4mon_A 1krl_A 3mon_A 2q33_B* 2q33_A*

Probab=99.90  E-value=3e-24  Score=159.53  Aligned_cols=83  Identities=23%  Similarity=0.246  Sum_probs=76.4

Q ss_pred             CceeeeCCCCCCCHHHHHHHHHHHHHHHhhc-CCceeEEEEEEE-----------EEEeeccEEEEEEEEEEeCCcceEE
Q 027502           32 PGGVYDYGGNQNSAEIEGLARFAVQEHNKKE-NALLQFARVLKA-----------KEQVVAGKLYYLTLEVIDAGKNKIY   99 (222)
Q Consensus        32 ~GG~~~i~~~~~d~~v~~~a~fAv~~~N~~s-n~~~~~~kV~~a-----------~~QVVaG~nY~l~v~v~~~~~~~~c   99 (222)
                      +|||+++|  + ||+++++|+||+++||+.. ++.++|.+|+++           ++| |+|+||+|++++.++    .|
T Consensus         1 ~Ggw~~id--v-~~~iqela~FAV~e~nk~~~~~~L~f~~Vv~~~~~~~~~~~~~~~Q-VaG~nY~Ltlea~d~----~y   72 (97)
T 2o9u_X            1 MGEWEIID--I-GPFTQNLGKFAVDEENKIGQYGRLTFNKVIRPCMKKTIYENEGFRE-IKGYEYQLYVYASDK----LF   72 (97)
T ss_dssp             -CCCEEEC--C-SHHHHHHHHHHHHHHHHHCTTCSCCEEEEEEEEEEEEEECSSSSCS-EEEEEEEEEEEETTE----EC
T ss_pred             CCCceECC--C-CHHHHHHHHHHHHHHhccccCCCcEEEEEEEcccccccccchhhee-eccEEEEEEEEEeCC----ce
Confidence            49999995  6 9999999999999999987 888999999999           999 999999999999876    99


Q ss_pred             EEEEEEecCCCceeeEEEeeCCC
Q 027502          100 EAKIWVKPWINFKQLQEFKHAEH  122 (222)
Q Consensus       100 ~~~V~~~PW~~~~~l~s~~c~~~  122 (222)
                      +|.||++||+++++|++|+|.-.
T Consensus        73 eA~V~ekpw~n~k~L~sF~~~~~   95 (97)
T 2o9u_X           73 RADISEDYKTRGRKLLRFNGPVP   95 (97)
T ss_dssp             -CEEEEETTTCCEEEEECCCCCC
T ss_pred             EEEEEEecCCCcEEeeEccCCCC
Confidence            99999999999999999998743

>3l0r_A Cystatin-2, OMC2; SOFT TICK, protease inhibitor, thiol protease INHI hydrolase inhibitor; 2.45A {Ornithodoros moubata}

Probab=99.90  E-value=1.2e-23  Score=161.83  Aligned_cols=88  Identities=28%  Similarity=0.410  Sum_probs=80.7

Q ss_pred             cCCceeeeCCCCCCCHHHHHHHHHHHHHHHhhcCCce--eEEEEEEEEEEeeccEEEEEEEEEEeC--------------
Q 027502           30 MRPGGVYDYGGNQNSAEIEGLARFAVQEHNKKENALL--QFARVLKAKEQVVAGKLYYLTLEVIDA--------------   93 (222)
Q Consensus        30 ~l~GG~~~i~~~~~d~~v~~~a~fAv~~~N~~sn~~~--~~~kV~~a~~QVVaG~nY~l~v~v~~~--------------   93 (222)
                      +|+|||++++  .+||+++++|+||+.  |+++++.+  ++.+|++|++|||+|+||+|+++++++              
T Consensus         2 ~~~GG~~~i~--~~d~~v~~~a~~Av~--N~~s~~~~~~~~~kV~~a~~QVVaG~~Y~i~v~v~~t~C~K~~~~~~~~~C   77 (115)
T 3l0r_A            2 SIPGGWTRQD--PTEARFLELAHFATS--SQTEGREFYDTVVTVKEVETQVVAGMNYKLTIEISPSVCKIGEVQYSAEQC   77 (115)
T ss_dssp             -CCCSCEEEC--TTCHHHHHHHHHHHT--TCCTTCSEEEEEEEEEEEEEEESSSEEEEEEEEEEEEEEEBTTBCCCTTTC
T ss_pred             CCcccceeCC--CCCHHHHHHHHHHHh--ccccCCCcceEEEEEEEEEEEEEeeEEEEEEEEEecccccccccccccccC
Confidence            4799999998  599999999999999  88888875  789999999999999999999999863              


Q ss_pred             -----CcceEEEEEEEEecCCCceeeEEEeeCC
Q 027502           94 -----GKNKIYEAKIWVKPWINFKQLQEFKHAE  121 (222)
Q Consensus        94 -----~~~~~c~~~V~~~PW~~~~~l~s~~c~~  121 (222)
                           ++...|+++||++||+++++|++|.|..
T Consensus        78 ~~~~~~~~~~C~~~V~~~PW~~~~~l~~~~~~~  110 (115)
T 3l0r_A           78 VPKDAQQKSTCVAVIYHVPWQNQKSVTSYRCEH  110 (115)
T ss_dssp             CBSCTTSCEEEEEEEEEEGGGTEEEEEEEEECC
T ss_pred             cccCCCceeEEEEEEEEecCCCeeEEEEEEccc
Confidence                 4788999999999999999999999975

>2ch9_A Cystatin F; inhibitor, cysteine protease inhibitor, glycoprotein; HET: NAG FUL; 2.10A {Homo sapiens}

Probab=99.90  E-value=3.1e-23  Score=162.91  Aligned_cols=91  Identities=22%  Similarity=0.422  Sum_probs=83.1

Q ss_pred             ccCCceeeeCCCCCCCHHHHHHHHHHHHHHHhhcCCce--eEEEEEEEEEEeeccEEEEEEEEEEeC-------------
Q 027502           29 QMRPGGVYDYGGNQNSAEIEGLARFAVQEHNKKENALL--QFARVLKAKEQVVAGKLYYLTLEVIDA-------------   93 (222)
Q Consensus        29 ~~l~GG~~~i~~~~~d~~v~~~a~fAv~~~N~~sn~~~--~~~kV~~a~~QVVaG~nY~l~v~v~~~-------------   93 (222)
                      .+++|||.+++  .+||+++++|+||+.+||+++|+.+  ++.+|++|++|||+|++|+|+++++++             
T Consensus        14 ~~~~Gg~~~~~--~~d~ev~e~a~~Av~~~N~~sn~~~~~~l~~V~~a~~QVVaG~~Y~l~v~v~~t~C~K~~~~~~~~C   91 (131)
T 2ch9_A           14 RVKPGFPKTIK--TNDPGVLQAARYSVEKFNNCTNDMFLFKESRITRALVQIVKGLKYMLEVEIGRTTCKKNQHLRLDDC   91 (131)
T ss_dssp             SSCCCCCEECC--TTCHHHHHHHHHHHHHHHHHSCCSEEEEEEEEEEEEEEESSSEEEEEEEEEEEEEEETTSCCCGGGC
T ss_pred             ccCCCCCeeCC--CCCHHHHHHHHHHHHHHHHhCCCCcceEEEEEEEeeeEecCCeEEEEEEEEEcccccCCCCCccccC
Confidence            57899999998  6899999999999999999999985  779999999999999999999999974             


Q ss_pred             -----C---cceEEEEEEEEecCCCceeeEEEeeCC
Q 027502           94 -----G---KNKIYEAKIWVKPWINFKQLQEFKHAE  121 (222)
Q Consensus        94 -----~---~~~~c~~~V~~~PW~~~~~l~s~~c~~  121 (222)
                           +   +...|+++||++||+++++|++|.|..
T Consensus        92 ~~~~~~~~~~~~~C~~~V~~~PW~~~~~l~~f~~~~  127 (131)
T 2ch9_A           92 DFQTNHTLKQTLSCYSEVWVVPWLQHFEVPVLRCHH  127 (131)
T ss_dssp             CBCCSTTTCCEEEEEEEEEEEGGGTEEEEEEEEEEC
T ss_pred             CcccCcccccccEEEEEEEEecCCCeeEEEEEeccc
Confidence                 1   235899999999999999999999974

>3mwz_A Sialostatin L2; antiparallel beta-sheet, hydrolase inhibitor; HET: MSE; 1.52A {Ixodes scapularis} PDB: 3lh4_A 3li7_A

Probab=99.89  E-value=8.3e-23  Score=156.72  Aligned_cols=91  Identities=23%  Similarity=0.317  Sum_probs=82.5

Q ss_pred             ccCCceeeeCCCCCCCHHHHHHHHHHHHHHHhhcC-Cce--eEEEEEEEEEEeeccEEEEEEEEEEe-------------
Q 027502           29 QMRPGGVYDYGGNQNSAEIEGLARFAVQEHNKKEN-ALL--QFARVLKAKEQVVAGKLYYLTLEVID-------------   92 (222)
Q Consensus        29 ~~l~GG~~~i~~~~~d~~v~~~a~fAv~~~N~~sn-~~~--~~~kV~~a~~QVVaG~nY~l~v~v~~-------------   92 (222)
                      ..|+|||+++++ .+||+++++|+||+.+||++++ +.+  ++.+|++|++|||+|+||+|++++++             
T Consensus         3 ~~~~Gg~~~~~~-~~~~~v~~~~~~av~~~N~~sn~~~~~~~~~~V~~a~~QvVaG~~Y~l~v~v~~t~C~K~~~~~~~~   81 (115)
T 3mwz_A            3 LALRGGYRERSN-QDDPEYLEMAHYATSTWSAQQPGKTHFDTVVEVMKVETQTVAGTNYRLTLKVAESTCELTSTYNKDT   81 (115)
T ss_dssp             CCCSSCCEEECT-TSCTHHHHHHHHHHHHHHHTSTTCCEEEEEEEEEEEEEEESSSEEEEEEEEEEEEEEETTSCCCTTT
T ss_pred             cccCCcceECCC-CCCHHHHHHHHHHHHHHHhhcCCcccceeeeeeeEEEeeccCCEEEEEEEEEEeccccCCCcCCccc
Confidence            457999999983 3899999999999999999998 554  77999999999999999999999965             


Q ss_pred             -----CCcceEEEEEEEEecCCCceeeEEEeeCC
Q 027502           93 -----AGKNKIYEAKIWVKPWINFKQLQEFKHAE  121 (222)
Q Consensus        93 -----~~~~~~c~~~V~~~PW~~~~~l~s~~c~~  121 (222)
                           +++...|+++||++| +++++|++|+|.+
T Consensus        82 C~~~~~~~~~~C~~~V~~~P-~~~~~l~~~~C~~  114 (115)
T 3mwz_A           82 CQANANAAQRTCTTVIYRNM-QGEKSINSFECAA  114 (115)
T ss_dssp             CCCCTTSCEEEEEEEEEECT-TSCEEEEEEEECC
T ss_pred             CCCCCCCCeeEEEEEEEECC-CCEEEEccccccC
Confidence                 357889999999999 9999999999975

>3ima_B Cysteine proteinase inhibitor; cystatin, tarocystatin, cecpi, papain, phytocystatin, allergen, disulfide bond, hydrolase, protease; 2.03A {Colocasia esculenta} SCOP: d.17.1.0

Probab=99.84  E-value=5.8e-21  Score=141.05  Aligned_cols=78  Identities=19%  Similarity=0.252  Sum_probs=68.5

Q ss_pred             CCCcceec--cCCCHHHHHHHHHHHHHHHhhccCccceeEEEEEEeeeeeecceeEEEEEEEEccCCccceEEEEEEeCC
Q 027502          138 HGQEWLAV--STNDLEVKNAANHAVKSMQRKSNSLFLYELLEILQAKAKVIEDYAKFELHLKLRRGSEEEKHWVEIIKNS  215 (222)
Q Consensus       138 ~~gg~~~i--~~~d~~v~e~a~fAv~~~N~~sn~~~~~~~~kV~~a~~QVVaG~~yy~l~l~~~~g~~~~~~~~~v~~~~  215 (222)
                      ++|||+++  +++||+||++|+||+.+||+++|+.|  .+.+|++|++|||+|++| +|++++++|++...|+|+||+.|
T Consensus         2 ~~GG~~~~~~~~~d~~v~~~a~fav~~~n~~~n~~~--~~~~Vv~a~~QVVaG~nY-~l~v~~~~~~~~~~y~a~V~~~p   78 (91)
T 3ima_B            2 LMGGIVDVEGAQNSAEVEELARFAVDEHNKKENALL--QFSRLVKAKQQVVSGIMH-HLTVEVIEGGKKKVYEAKVWVQA   78 (91)
T ss_dssp             CBTCEEC------CHHHHHHHHHHHHHHHHHHTCCC--EEEEEEEEEEEESSSEEE-EEEEEEEETTEEEEEEEEEEEEG
T ss_pred             CCcccccCcCCCCCHHHHHHHHHHHHHHHHhcCCce--EEEEEEEEEEEEeccEEE-EEEEEEecCCceEEEEEEEEEee
Confidence            57999999  79999999999999999999999986  779999999999999995 69999999999899999999998


Q ss_pred             CCc
Q 027502          216 EGK  218 (222)
Q Consensus       216 ~~~  218 (222)
                      -.+
T Consensus        79 W~~   81 (91)
T 3ima_B           79 WLN   81 (91)
T ss_dssp             GGT
T ss_pred             CCC
Confidence            433

>3ul5_A Canecystatin-1; defense, hydrolase inhibitor; 2.30A {Saccharum officinarum} PDB: 3ul6_A*

Probab=99.82  E-value=5.6e-20  Score=145.47  Aligned_cols=83  Identities=17%  Similarity=0.257  Sum_probs=65.6

Q ss_pred             cccCCCCcceec---cCCCHHHHHHHHHHHHHHHhhccCccceeEEEEEEeeeeeecceeEEEEEEEEcc-CCccceEEE
Q 027502          134 KRGCHGQEWLAV---STNDLEVKNAANHAVKSMQRKSNSLFLYELLEILQAKAKVIEDYAKFELHLKLRR-GSEEEKHWV  209 (222)
Q Consensus       134 k~~~~~gg~~~i---~~~d~~v~e~a~fAv~~~N~~sn~~~~~~~~kV~~a~~QVVaG~~yy~l~l~~~~-g~~~~~~~~  209 (222)
                      ++..++|||+++   ++|||+||++|+||+.+||+++|+.|  ++.+|++|++|||+|++| +|+|++++ +++...|+|
T Consensus        41 ~~~~~~GG~~~i~~~~~ndpeVqela~fAV~e~Nkksn~~l--~~~kVv~a~sQVVAG~nY-~L~V~a~d~~g~~~~y~a  117 (139)
T 3ul5_A           41 RRVGMVGDVRDAPAGHENDLEAIELARFAVAEHNSKTNAML--EFERLVKVRHQVVAGTMH-HFTVQVKEAGGGKKLYEA  117 (139)
T ss_dssp             ---------------CTTCHHHHHHHHHHHHHHHHHHCCCC--EEEEEEEEEEEEEEEEEE-EEEEEEECSSCCEEEEEE
T ss_pred             CCCCCCCCcccccCCCCCCHHHHHHHHHHHHHHHHhCCCce--eEEEEEEEEEEEecCEEE-EEEEEEecCCCCeEEEEE
Confidence            344578999999   79999999999999999999999975  999999999999999995 69999999 888889999


Q ss_pred             EEEeCCCCce
Q 027502          210 EIIKNSEGKF  219 (222)
Q Consensus       210 ~v~~~~~~~~  219 (222)
                      +||+.|--++
T Consensus       118 ~VwekPW~n~  127 (139)
T 3ul5_A          118 KVWEKVWENF  127 (139)
T ss_dssp             EEEEETTTTE
T ss_pred             EEEEeeCCCc
Confidence            9999995443

>1eqk_A Oryzacystatin-I; alpha and beta proteins, cystatin-like fold, cystatin/monellin superfamily, phytocystatin family; NMR {Oryza sativa japonica group} SCOP: d.17.1.2

Probab=99.81  E-value=1.2e-19  Score=136.43  Aligned_cols=76  Identities=20%  Similarity=0.252  Sum_probs=71.3

Q ss_pred             CCCCcceecc-CCCHHHHHHHHHHHHHHHhhccCccceeEEEEEEeeeeeecceeEEEEEEEEccCCccceEEEEEEeCC
Q 027502          137 CHGQEWLAVS-TNDLEVKNAANHAVKSMQRKSNSLFLYELLEILQAKAKVIEDYAKFELHLKLRRGSEEEKHWVEIIKNS  215 (222)
Q Consensus       137 ~~~gg~~~i~-~~d~~v~e~a~fAv~~~N~~sn~~~~~~~~kV~~a~~QVVaG~~yy~l~l~~~~g~~~~~~~~~v~~~~  215 (222)
                      .++|||++++ ++||+++++++||+.+||+++|+.|  ++.+|++|++|||+|++| +|+|+++++++...|.++||+.|
T Consensus         7 ~~~GG~~~~~~~~~~~v~~~a~~Av~~~n~~~n~~~--~~~~Vv~a~~QVVaG~~Y-~l~v~~~~~~~~~~c~~~V~~~P   83 (102)
T 1eqk_A            7 PVLGGVEPVGNENDLHLVDLARFAVTEHNKKANSLL--EFEKLVSVKQQVVAGTLY-YFTIEVKEGDAKKLYEAKVWEKP   83 (102)
T ss_dssp             SCSSSSEEECCTTCHHHHHHHHHHHHHHHHHTTCCE--EEEEEEEEEEEESSSEEE-EEEEEEEETTCCEEEEEEEEEBT
T ss_pred             CCCcccccCCCCCCHHHHHHHHHHHHHHHhhcCCce--EEEEEEEEEEEEeccEEE-EEEEEEecCCCcEEEEEEEEEee
Confidence            4789999986 9999999999999999999999986  789999999999999995 79999999998899999999998

>2kxg_A Aspartic protease inhibitor; sqapi, protein, hydrolase inhib; NMR {Cucurbita maxima}

Probab=99.80  E-value=1.4e-19  Score=134.67  Aligned_cols=75  Identities=20%  Similarity=0.178  Sum_probs=67.9

Q ss_pred             ccCCCCcceeccCCCHHHHHHHHHHHHHHHhhccCccceeEEEEEEeeeeeecce-----eEEEEEEEEccC--CccceE
Q 027502          135 RGCHGQEWLAVSTNDLEVKNAANHAVKSMQRKSNSLFLYELLEILQAKAKVIEDY-----AKFELHLKLRRG--SEEEKH  207 (222)
Q Consensus       135 ~~~~~gg~~~i~~~d~~v~e~a~fAv~~~N~~sn~~~~~~~~kV~~a~~QVVaG~-----~yy~l~l~~~~g--~~~~~~  207 (222)
                      |++++|||+++++|||+||++|+|||++||++     .+++.+|++|  |||+|+     +| +|+|+++++  ++...|
T Consensus         2 ~~~~~Gg~~~i~~nd~~v~e~a~fAv~e~N~~-----~l~~~~Vv~a--QVVaG~~~~~~~Y-~L~l~~~~~~~~~~~~y   73 (95)
T 2kxg_A            2 PGPAIGEVIGISVNDPRVKEIAEFALKQHAEQ-----NLILAGVDAG--QIIKGIPHWDNYY-NLILSAKHSPHEFSKFY   73 (95)
T ss_dssp             CCCSSCCCCCCCTTCHHHHHHHHHHHHHCCTT-----CCEEEEEEEE--EEECSSCSSCCEE-EEEEEEESCTTSCCEEE
T ss_pred             CCCCCCcceECCCCCHHHHHHHHHHHHHHHhh-----CcEEEEEEEE--eEecCccccCccE-EEEEEEecCCCCCceEE
Confidence            35688999999999999999999999999998     4799999999  999999     95 799999998  567789


Q ss_pred             EEEEEeCCCC
Q 027502          208 WVEIIKNSEG  217 (222)
Q Consensus       208 ~~~v~~~~~~  217 (222)
                      +|+||+.|-.
T Consensus        74 ~a~Vw~kpW~   83 (95)
T 2kxg_A           74 NVVVLEKASD   83 (95)
T ss_dssp             EEEEEEETTT
T ss_pred             EEEEEEccCC
Confidence            9999999843

>3mwz_A Sialostatin L2; antiparallel beta-sheet, hydrolase inhibitor; HET: MSE; 1.52A {Ixodes scapularis} PDB: 3lh4_A 3li7_A

Probab=99.80  E-value=3.3e-19  Score=136.58  Aligned_cols=83  Identities=14%  Similarity=0.175  Sum_probs=73.0

Q ss_pred             cCCCCcceeccC-CCHHHHHHHHHHHHHHHhhcc-CccceeEEEEEEeeeeeecceeEEEEEEEEcc-------------
Q 027502          136 GCHGQEWLAVST-NDLEVKNAANHAVKSMQRKSN-SLFLYELLEILQAKAKVIEDYAKFELHLKLRR-------------  200 (222)
Q Consensus       136 ~~~~gg~~~i~~-~d~~v~e~a~fAv~~~N~~sn-~~~~~~~~kV~~a~~QVVaG~~yy~l~l~~~~-------------  200 (222)
                      +.++|||+++++ +||+|+++|+||+.+||+++| +.|+|++.+|++|++|||+|++| +|++++++             
T Consensus         3 ~~~~Gg~~~~~~~~~~~v~~~~~~av~~~N~~sn~~~~~~~~~~V~~a~~QvVaG~~Y-~l~v~v~~t~C~K~~~~~~~~   81 (115)
T 3mwz_A            3 LALRGGYRERSNQDDPEYLEMAHYATSTWSAQQPGKTHFDTVVEVMKVETQTVAGTNY-RLTLKVAESTCELTSTYNKDT   81 (115)
T ss_dssp             CCCSSCCEEECTTSCTHHHHHHHHHHHHHHHTSTTCCEEEEEEEEEEEEEEESSSEEE-EEEEEEEEEEEETTSCCCTTT
T ss_pred             cccCCcceECCCCCCHHHHHHHHHHHHHHHhhcCCcccceeeeeeeEEEeeccCCEEE-EEEEEEEeccccCCCcCCccc
Confidence            357899999998 999999999999999999999 88899999999999999999995 69999964             


Q ss_pred             -----CCccceEEEEEEeCCCCce
Q 027502          201 -----GSEEEKHWVEIIKNSEGKF  219 (222)
Q Consensus       201 -----g~~~~~~~~~v~~~~~~~~  219 (222)
                           +++...+.++||..|.+.+
T Consensus        82 C~~~~~~~~~~C~~~V~~~P~~~~  105 (115)
T 3mwz_A           82 CQANANAAQRTCTTVIYRNMQGEK  105 (115)
T ss_dssp             CCCCTTSCEEEEEEEEEECTTSCE
T ss_pred             CCCCCCCCeeEEEEEEEECCCCEE
Confidence                 3345679999999994433

>1yvb_I Cystatin; cysteine protease-inhibitor complex, hydrolase-hydrolase INH complex; 2.70A {Gallus gallus} SCOP: d.17.1.2 PDB: 1a67_A 1cew_I 1a90_A

Probab=99.79  E-value=2.9e-19  Score=135.60  Aligned_cols=77  Identities=16%  Similarity=0.181  Sum_probs=71.7

Q ss_pred             CCCcceeccCCCHHHHHHHHHHHHHHHhhccCccceeEEEEEEeeeeeecceeEEEEEEEEccCC---------------
Q 027502          138 HGQEWLAVSTNDLEVKNAANHAVKSMQRKSNSLFLYELLEILQAKAKVIEDYAKFELHLKLRRGS---------------  202 (222)
Q Consensus       138 ~~gg~~~i~~~d~~v~e~a~fAv~~~N~~sn~~~~~~~~kV~~a~~QVVaG~~yy~l~l~~~~g~---------------  202 (222)
                      ++|||++++++||+|+++|+||+.+||+++|+.|+|++.+|++|++|||+|++| +|+++++++.               
T Consensus         2 ~~Gg~~~~~~~d~~v~~~~~~av~~~N~~s~~~~~~~l~~v~~a~~QvVaG~~y-~l~v~v~~t~C~k~~~~~~~C~~~~   80 (111)
T 1yvb_I            2 LLGAPVPVDENDEGLQRALQFAMAEYNRASNDKYSSRVVRVISAKRQLVSGIKY-ILQVEIGRTTCPKSSGDLQSCEFHD   80 (111)
T ss_dssp             CTTCEECCCTTCHHHHHHHHHHHHHHHHHCCCSSCEEEEEECCCEEEESSSEEE-EEEEEEEEBSSCSSSSCSSCCCBCS
T ss_pred             CCCCceECCCCCHHHHHHHHHHHHHHHHhCCCcceeEEEEEEEEEEEEECCeEE-EEEEEEEccccCCCCCCcccCCCCC
Confidence            579999999999999999999999999999999999999999999999999995 6999999874               


Q ss_pred             -----ccceEEEEEEeCC
Q 027502          203 -----EEEKHWVEIIKNS  215 (222)
Q Consensus       203 -----~~~~~~~~v~~~~  215 (222)
                           +...+.++||..|
T Consensus        81 ~~~~~~~~~C~~~V~~~p   98 (111)
T 1yvb_I           81 EPEMAKYTTCTFVVYSIP   98 (111)
T ss_dssp             STTTSCCEEEEEEEEEEG
T ss_pred             CcccccccEEEEEEEecC
Confidence                 3467999999988

>2oct_A Cystatin B; stefin, amyloid, domain-swapping, hand shaking, PR isomerization, protein binding; 1.40A {Homo sapiens} PDB: 1stf_I*

Probab=99.79  E-value=5.7e-19  Score=132.15  Aligned_cols=86  Identities=21%  Similarity=0.279  Sum_probs=78.4

Q ss_pred             cCCceeeeCCCCCCCHHHHHHHHHHHHHHHhhcCCceeEEEEEEEEEEeeccEEEEEEEEEEeCCcceEEEEEEEEe-c-
Q 027502           30 MRPGGVYDYGGNQNSAEIEGLARFAVQEHNKKENALLQFARVLKAKEQVVAGKLYYLTLEVIDAGKNKIYEAKIWVK-P-  107 (222)
Q Consensus        30 ~l~GG~~~i~~~~~d~~v~~~a~fAv~~~N~~sn~~~~~~kV~~a~~QVVaG~nY~l~v~v~~~~~~~~c~~~V~~~-P-  107 (222)
                      ||+|||++++  .+||+++++++||+.++|+++|..+.+.+|+++++|||||+||+|++++++++   .++++||.. | 
T Consensus         1 mm~GG~~~~~--~~~~evq~i~~~a~~~~n~~~~~~~~~~~vv~~~tQVVAG~NY~ikv~v~~~~---~~h~~vy~~lp~   75 (98)
T 2oct_A            1 MMSGAPSATQ--PATAETQHIADQVRSQLEEKYNKKFPVFKAVSFKSQVVAGTNYFIKVHVGDED---FVHLRVFQSLPH   75 (98)
T ss_dssp             -CCSSCCCCE--ECCHHHHHHHHHHHHHHHHHHTSCCSCCEEEEEEEEEEEEEEEEEEEECSTTC---EEEEEEEEESST
T ss_pred             CCcccCcCCC--CCCHHHHHHHHHHHHHHHhhcCCccceeEEEEEEEEEeCCEEEEEEEEECCCc---EEEEEEEecCCC
Confidence            5899999997  48999999999999999999999999999999999999999999999998876   689999998 4 


Q ss_pred             CCCceeeEEEeeC
Q 027502          108 WINFKQLQEFKHA  120 (222)
Q Consensus       108 W~~~~~l~s~~c~  120 (222)
                      |.+..+|+++.+.
T Consensus        76 ~~~~~~l~~~q~~   88 (98)
T 2oct_A           76 ENKSLTLSNYQTN   88 (98)
T ss_dssp             TCCCEEEEEEEEE
T ss_pred             CCCceEEEEEecC
Confidence            7889999999763

>3gax_A Cystatin-C; cysteine protease inhibitor, 3D domain swapping, protein AGG amyloid, protein engineering, twinning; 1.70A {Homo sapiens} SCOP: d.17.1.2 PDB: 1g96_A 1tij_A 3qrd_A 3ps8_A 3nx0_A 3sva_A 3s67_A 1r4c_A

Probab=99.78  E-value=7.8e-19  Score=135.53  Aligned_cols=80  Identities=15%  Similarity=0.154  Sum_probs=67.8

Q ss_pred             ccCCCCcceeccCCCHHHHHHHHHHHHHHHhhccCccceeEEEEEEeeeeeecceeEEEEEEEEccC-------------
Q 027502          135 RGCHGQEWLAVSTNDLEVKNAANHAVKSMQRKSNSLFLYELLEILQAKAKVIEDYAKFELHLKLRRG-------------  201 (222)
Q Consensus       135 ~~~~~gg~~~i~~~d~~v~e~a~fAv~~~N~~sn~~~~~~~~kV~~a~~QVVaG~~yy~l~l~~~~g-------------  201 (222)
                      .+.++|||++++++||+|+++|+||+.+||+++|+.|+|++.+|++|++|||+|++| +|+++++++             
T Consensus         6 ~~~~~Gg~~~~~~~d~~v~~~a~~av~~~N~~sn~~~~~~~~~v~~a~~QvVaG~~Y-~l~v~v~~t~C~K~~~~~~~C~   84 (120)
T 3gax_A            6 PPRLVGGPMDASVEEEGVRRALDFAVGEYNKASNDMYHSRACQVVRARKQIVAGVNY-FLDVELCRTTCTKTQPNLDNCP   84 (120)
T ss_dssp             ------CCEEECTTSHHHHHHHHHHHHHHHHHCCCSEEEEEEEEEEEEEEESSSEEE-EEEEEEEEEEEESCC--CCCCC
T ss_pred             cCccCCCCEeCCCCCHHHHHHHHHHHHHHHhccCCcceeeEEEEEEEEEEEecCeEE-EEEEEEEeeeccCCCCCcccCC
Confidence            356789999999999999999999999999999999999999999999999999995 699999974             


Q ss_pred             -------CccceEEEEEEeCC
Q 027502          202 -------SEEEKHWVEIIKNS  215 (222)
Q Consensus       202 -------~~~~~~~~~v~~~~  215 (222)
                             .+...+.++||..|
T Consensus        85 ~~~~~~~~~~~~C~~~V~~~P  105 (120)
T 3gax_A           85 FHDQPHLKRKAFCSFQIYAVP  105 (120)
T ss_dssp             BCSSHHHHCCEEEEEEEEEET
T ss_pred             CcCCccccCceEEEEEEEecC
Confidence                   12346889999887

>2l4v_A Cystatin; protease inhibitor, hydrolase inhibitor; NMR {Ananas comosus}

Probab=99.78  E-value=1.3e-18  Score=137.32  Aligned_cols=77  Identities=16%  Similarity=0.242  Sum_probs=72.1

Q ss_pred             cCCCCcceecc---CCCHHHHHHHHHHHHHHHhhccCccceeEEEEEEeeeeeecceeEEEEEEEEccCCccceEEEEEE
Q 027502          136 GCHGQEWLAVS---TNDLEVKNAANHAVKSMQRKSNSLFLYELLEILQAKAKVIEDYAKFELHLKLRRGSEEEKHWVEII  212 (222)
Q Consensus       136 ~~~~gg~~~i~---~~d~~v~e~a~fAv~~~N~~sn~~~~~~~~kV~~a~~QVVaG~~yy~l~l~~~~g~~~~~~~~~v~  212 (222)
                      ..++|||++++   ++||+++++++||+.+||+++|+.|  .+.+|++|++|||+|++| +|+|+++++++...|.++||
T Consensus        40 ~~~~GG~~~i~~~~~nd~evqe~a~fAv~e~N~~sn~~~--~f~kVv~a~~QVVAG~nY-~l~vev~~~~~~~~c~a~Vw  116 (135)
T 2l4v_A           40 HPIMGGIYDAPLNNENGFDKEDLARFAVREYNNKNNALL--EFVRVVKAKEQVVSGMMH-YLTVEVNDAGKKKLYEAKVW  116 (135)
T ss_dssp             CCCCCCSSCCCCTTTTSHHHHHHHHHHHHHHHHHTSCCC--EEEEEEEEEEECSSSEEE-EEEEEEEETTEEEEEEEEEE
T ss_pred             CCCCCccCcCCCCCCCCHHHHHHHHHHHHHHHhhcCCce--EEEEEEEEEEEEecCEEE-EEEEEEecCCceEEEEEEEE
Confidence            45789999999   9999999999999999999999987  669999999999999995 69999999988899999999


Q ss_pred             eCC
Q 027502          213 KNS  215 (222)
Q Consensus       213 ~~~  215 (222)
                      +.|
T Consensus       117 ~kP  119 (135)
T 2l4v_A          117 EQV  119 (135)
T ss_dssp             ECS
T ss_pred             Eec
Confidence            998

>1cyu_A Cystatin A, stefin A; proteinase inhibitor (cysteine); NMR {Homo sapiens} SCOP: d.17.1.2 PDB: 1cyv_A 1gd3_A 1dvc_A 1dvd_A 1n9j_A 1nb3_I* 1nb5_I* 3k9m_C 3kfq_C 3kse_D* 1gd4_A

Probab=99.78  E-value=9.4e-20  Score=136.11  Aligned_cols=85  Identities=22%  Similarity=0.279  Sum_probs=78.0

Q ss_pred             cCCceeeeCCCCCCCHHHHHHHHHHHHHHHhhcCCceeEEEEEEEEEEeeccEEEEEEEEEEeCCcceEEEEEEEEec--
Q 027502           30 MRPGGVYDYGGNQNSAEIEGLARFAVQEHNKKENALLQFARVLKAKEQVVAGKLYYLTLEVIDAGKNKIYEAKIWVKP--  107 (222)
Q Consensus        30 ~l~GG~~~i~~~~~d~~v~~~a~fAv~~~N~~sn~~~~~~kV~~a~~QVVaG~nY~l~v~v~~~~~~~~c~~~V~~~P--  107 (222)
                      ||+|||++++  .+||+++++|+||+.++|+++|+.|++.+|++|++|||||+||+|+++++++.   ..+++||...  
T Consensus         1 ~~~GG~~~~~--~~d~ev~~~a~~av~~~n~~~n~~~~~~~vv~a~~QVVaG~nY~l~v~~~~~~---c~~~~V~~~l~~   75 (98)
T 1cyu_A            1 MIPGGLSEAK--PATPEIQEIVDKVKPQLEEKTNETYGKLEAVQYKTQVVAGTNYYIKVRAGDNK---YLHLKVFKSLPG   75 (98)
T ss_dssp             CCCSSCSSEE--ESCTTHHHHHHHTCTTTTTSSCCSSSCEEEEEEEEECSSSCEEEEEEEECSSC---BCEEEEECCCSS
T ss_pred             CCCcccccCC--CCCHHHHHHHHHHHHHHHhhcCCCcceEEEEEEEEEEecceEEEEEEEEcCCc---EEEEEEecCCCC
Confidence            5799999997  68999999999999999999999999999999999999999999999999876   4688999874  


Q ss_pred             CCCceeeEEEee
Q 027502          108 WINFKQLQEFKH  119 (222)
Q Consensus       108 W~~~~~l~s~~c  119 (222)
                      |.+.++|+++..
T Consensus        76 ~~~~~~l~~~q~   87 (98)
T 1cyu_A           76 QNEDLVLTGYQV   87 (98)
T ss_dssp             SCCCCEEEEEEC
T ss_pred             CCCCeEEEEEec
Confidence            788999999864

>1roa_A Cystatin D; inhibitor of cysteine pepidases, protein binding; 1.80A {Homo sapiens} SCOP: d.17.1.2 PDB: 1rn7_A

Probab=99.76  E-value=1.5e-18  Score=134.08  Aligned_cols=78  Identities=18%  Similarity=0.196  Sum_probs=70.7

Q ss_pred             CCCcceeccCCCHHHHHHHHHHHHHHHhh-ccCccceeEEEEEEeeeeeecceeEEEEEEEEccCC--------------
Q 027502          138 HGQEWLAVSTNDLEVKNAANHAVKSMQRK-SNSLFLYELLEILQAKAKVIEDYAKFELHLKLRRGS--------------  202 (222)
Q Consensus       138 ~~gg~~~i~~~d~~v~e~a~fAv~~~N~~-sn~~~~~~~~kV~~a~~QVVaG~~yy~l~l~~~~g~--------------  202 (222)
                      ++|||++++++||+|+++|+||+.+||++ +|+.|+|++.+|++|++|||+|++| +|+++++++.              
T Consensus        10 ~~Gg~~~~~~~d~~v~~~a~~Av~~~N~~~s~~~~~~~l~~v~~a~~QVVaG~~Y-~l~v~v~~t~C~k~~~~~~~C~~~   88 (122)
T 1roa_A           10 LAGGIHATDLNDKSVQRALDFAISEYNKVINKDEYYSRPLQVMAAYQQIVGGVNY-YFNVKFGRTTCTKSQPNLDNCPFN   88 (122)
T ss_dssp             --CCEEEECTTSHHHHHHHHHHHHHHHHTTCCCSEEEEEEEEEEEEEEETTEEEE-EEEEEEEEEEEETTSSCCSSCCBC
T ss_pred             CCCCCeECCCCCHHHHHHHHHHHHHHHhcccCCCceeEEEEEEEEEEEEECCeEE-EEEEEEEccccCCCCCCcccCCCC
Confidence            68999999999999999999999999999 9999999999999999999999995 6999999864              


Q ss_pred             ------ccceEEEEEEeCCC
Q 027502          203 ------EEEKHWVEIIKNSE  216 (222)
Q Consensus       203 ------~~~~~~~~v~~~~~  216 (222)
                            +...+.++||..|-
T Consensus        89 ~~~~~~~~~~C~~~V~~~PW  108 (122)
T 1roa_A           89 DQPKLKEEEFCSFQINEVPW  108 (122)
T ss_dssp             CSTTCCCCEEEEEEEEEETT
T ss_pred             CCcccccceEEEEEEEeccc
Confidence                  24679999999983

>2w9q_A Multicystatin; protease inhibitor, thiol protease inhibitor, hydrolase inhibitor; 2.50A {Solanum tuberosum} PDB: 2w9p_A

Probab=99.76  E-value=2.6e-18  Score=125.45  Aligned_cols=73  Identities=18%  Similarity=0.218  Sum_probs=66.3

Q ss_pred             cceecc-CCCHHHHHHHHHHHHHHHhhccCccceeEEEEEEeeeeeecceeEEEEEEEEcc-CCccceEEEEEEeCCC
Q 027502          141 EWLAVS-TNDLEVKNAANHAVKSMQRKSNSLFLYELLEILQAKAKVIEDYAKFELHLKLRR-GSEEEKHWVEIIKNSE  216 (222)
Q Consensus       141 g~~~i~-~~d~~v~e~a~fAv~~~N~~sn~~~~~~~~kV~~a~~QVVaG~~yy~l~l~~~~-g~~~~~~~~~v~~~~~  216 (222)
                      ||++++ ++||+++++|+||+.+||+++|+  .+++.+|++|++|||||++| +|++++++ +.+...|.++||+.|=
T Consensus         1 G~~~~~~~~d~~v~~~~~fAv~~~n~~~n~--~~~~~~vv~a~~QVVaG~~Y-~l~v~~~~~~~~~~~c~~~V~~~PW   75 (87)
T 2w9q_A            1 GIVNVPNPNNTKFQELARFAIQDYNKKQNA--HLEFVENLNVKEQVVAGIMY-YITLAATDDAGKKKIYKAKIWVKEW   75 (87)
T ss_dssp             CCEECSSTTSHHHHHHHHHHHHHHHHHHTC--CEEEEEEEEEEEEESSSEEE-EEEEEEEETTTEEEEEEEEEEEEGG
T ss_pred             CcccCCCCCCHHHHHHHHHHHHHHHhhcCC--ceEEEEEEEEEEEEeccEEE-EEEEEEecCCCCeEEEEEEEEEeeC
Confidence            688884 99999999999999999999998  67999999999999999995 69999998 4556789999999983

>2ch9_A Cystatin F; inhibitor, cysteine protease inhibitor, glycoprotein; HET: NAG FUL; 2.10A {Homo sapiens}

Probab=99.75  E-value=4.6e-18  Score=133.37  Aligned_cols=80  Identities=19%  Similarity=0.208  Sum_probs=71.3

Q ss_pred             cCCCCcceeccCCCHHHHHHHHHHHHHHHhhccCccceeEEEEEEeeeeeecceeEEEEEEEEccCC-------------
Q 027502          136 GCHGQEWLAVSTNDLEVKNAANHAVKSMQRKSNSLFLYELLEILQAKAKVIEDYAKFELHLKLRRGS-------------  202 (222)
Q Consensus       136 ~~~~gg~~~i~~~d~~v~e~a~fAv~~~N~~sn~~~~~~~~kV~~a~~QVVaG~~yy~l~l~~~~g~-------------  202 (222)
                      +.++|||++++++||+|+++|+||+.+||+++|+.|+|++.+|++|++|||+|++| +|+++++++.             
T Consensus        14 ~~~~Gg~~~~~~~d~ev~e~a~~Av~~~N~~sn~~~~~~l~~V~~a~~QVVaG~~Y-~l~v~v~~t~C~K~~~~~~~~C~   92 (131)
T 2ch9_A           14 RVKPGFPKTIKTNDPGVLQAARYSVEKFNNCTNDMFLFKESRITRALVQIVKGLKY-MLEVEIGRTTCKKNQHLRLDDCD   92 (131)
T ss_dssp             SSCCCCCEECCTTCHHHHHHHHHHHHHHHHHSCCSEEEEEEEEEEEEEEESSSEEE-EEEEEEEEEEEETTSCCCGGGCC
T ss_pred             ccCCCCCeeCCCCCHHHHHHHHHHHHHHHHhCCCCcceEEEEEEEeeeEecCCeEE-EEEEEEEcccccCCCCCccccCC
Confidence            35789999999999999999999999999999999999999999999999999995 6999998741             


Q ss_pred             ----c----cceEEEEEEeCCC
Q 027502          203 ----E----EEKHWVEIIKNSE  216 (222)
Q Consensus       203 ----~----~~~~~~~v~~~~~  216 (222)
                          .    ...+.++||..|=
T Consensus        93 ~~~~~~~~~~~~C~~~V~~~PW  114 (131)
T 2ch9_A           93 FQTNHTLKQTLSCYSEVWVVPW  114 (131)
T ss_dssp             BCCSTTTCCEEEEEEEEEEEGG
T ss_pred             cccCcccccccEEEEEEEEecC
Confidence                1    1269999999883

>3l0r_A Cystatin-2, OMC2; SOFT TICK, protease inhibitor, thiol protease INHI hydrolase inhibitor; 2.45A {Ornithodoros moubata}

Probab=99.74  E-value=4.4e-18  Score=130.71  Aligned_cols=76  Identities=9%  Similarity=0.177  Sum_probs=68.6

Q ss_pred             CCCCcceeccCCCHHHHHHHHHHHHHHHhhccCccceeEEEEEEeeeeeecceeEEEEEEEEccC---------------
Q 027502          137 CHGQEWLAVSTNDLEVKNAANHAVKSMQRKSNSLFLYELLEILQAKAKVIEDYAKFELHLKLRRG---------------  201 (222)
Q Consensus       137 ~~~gg~~~i~~~d~~v~e~a~fAv~~~N~~sn~~~~~~~~kV~~a~~QVVaG~~yy~l~l~~~~g---------------  201 (222)
                      .++|||++++++||+|+++|+||+.  |+.+|+.|+|++.+|++|++|||+|++| .|+++++++               
T Consensus         2 ~~~GG~~~i~~~d~~v~~~a~~Av~--N~~s~~~~~~~~~kV~~a~~QVVaG~~Y-~i~v~v~~t~C~K~~~~~~~~~C~   78 (115)
T 3l0r_A            2 SIPGGWTRQDPTEARFLELAHFATS--SQTEGREFYDTVVTVKEVETQVVAGMNY-KLTIEISPSVCKIGEVQYSAEQCV   78 (115)
T ss_dssp             -CCCSCEEECTTCHHHHHHHHHHHT--TCCTTCSEEEEEEEEEEEEEEESSSEEE-EEEEEEEEEEEEBTTBCCCTTTCC
T ss_pred             CCcccceeCCCCCHHHHHHHHHHHh--ccccCCCcceEEEEEEEEEEEEEeeEEE-EEEEEEecccccccccccccccCc
Confidence            3679999999999999999999999  9999999999999999999999999995 699999863               


Q ss_pred             ----CccceEEEEEEeCC
Q 027502          202 ----SEEEKHWVEIIKNS  215 (222)
Q Consensus       202 ----~~~~~~~~~v~~~~  215 (222)
                          .+...+.++||..|
T Consensus        79 ~~~~~~~~~C~~~V~~~P   96 (115)
T 3l0r_A           79 PKDAQQKSTCVAVIYHVP   96 (115)
T ss_dssp             BSCTTSCEEEEEEEEEEG
T ss_pred             ccCCCceeEEEEEEEEec
Confidence                23457999999988

>1cyu_A Cystatin A, stefin A; proteinase inhibitor (cysteine); NMR {Homo sapiens} SCOP: d.17.1.2 PDB: 1cyv_A 1gd3_A 1dvc_A 1dvd_A 1n9j_A 1nb3_I* 1nb5_I* 3k9m_C 3kfq_C 3kse_D* 1gd4_A

Probab=99.74  E-value=8.3e-19  Score=130.93  Aligned_cols=78  Identities=13%  Similarity=0.184  Sum_probs=71.2

Q ss_pred             CCCcceeccCCCHHHHHHHHHHHHHHHhhccCccceeEEEEEEeeeeeecceeEEEEEEEEccCCccceEEEEEEeCC--
Q 027502          138 HGQEWLAVSTNDLEVKNAANHAVKSMQRKSNSLFLYELLEILQAKAKVIEDYAKFELHLKLRRGSEEEKHWVEIIKNS--  215 (222)
Q Consensus       138 ~~gg~~~i~~~d~~v~e~a~fAv~~~N~~sn~~~~~~~~kV~~a~~QVVaG~~yy~l~l~~~~g~~~~~~~~~v~~~~--  215 (222)
                      ++|||++++++||+++++|+||+.+||+++|+.|  ++.+|++|++|||||++| .|+++++++.   -+.+.||++.  
T Consensus         2 ~~GG~~~~~~~d~ev~~~a~~av~~~n~~~n~~~--~~~~vv~a~~QVVaG~nY-~l~v~~~~~~---c~~~~V~~~l~~   75 (98)
T 1cyu_A            2 IPGGLSEAKPATPEIQEIVDKVKPQLEEKTNETY--GKLEAVQYKTQVVAGTNY-YIKVRAGDNK---YLHLKVFKSLPG   75 (98)
T ss_dssp             CCSSCSSEEESCTTHHHHHHHTCTTTTTSSCCSS--SCEEEEEEEEECSSSCEE-EEEEEECSSC---BCEEEEECCCSS
T ss_pred             CCcccccCCCCCHHHHHHHHHHHHHHHhhcCCCc--ceEEEEEEEEEEecceEE-EEEEEEcCCc---EEEEEEecCCCC
Confidence            5799999999999999999999999999999987  999999999999999995 6999999864   4689999998  


Q ss_pred             -CCceec
Q 027502          216 -EGKFYL  221 (222)
Q Consensus       216 -~~~~~~  221 (222)
                       +|.|.|
T Consensus        76 ~~~~~~l   82 (98)
T 1cyu_A           76 QNEDLVL   82 (98)
T ss_dssp             SCCCCEE
T ss_pred             CCCCeEE
Confidence             788766

>2o9u_X Monellin chain B and monellin chain A; alternative conformations, 3-10 polyproline II helix, plant protein; 1.15A {Dioscoreophyllum cumminsii} SCOP: d.17.1.1 PDB: 3pxm_A 1m9g_A 3pyj_A 1fa3_A 1iv7_A 3q2p_A 1iv9_A 1mnl_A 1mol_A 1fuw_A 4mon_B 3mon_B 1krl_B 4mon_A 1krl_A 3mon_A 2q33_B* 2q33_A*

Probab=99.73  E-value=8.7e-18  Score=124.75  Aligned_cols=69  Identities=13%  Similarity=0.217  Sum_probs=61.9

Q ss_pred             CCcceeccCCCHHHHHHHHHHHHHHHhhc-cCccceeEEEEEEe-----------eeeeecceeEEEEEEEEccCCccce
Q 027502          139 GQEWLAVSTNDLEVKNAANHAVKSMQRKS-NSLFLYELLEILQA-----------KAKVIEDYAKFELHLKLRRGSEEEK  206 (222)
Q Consensus       139 ~gg~~~i~~~d~~v~e~a~fAv~~~N~~s-n~~~~~~~~kV~~a-----------~~QVVaG~~yy~l~l~~~~g~~~~~  206 (222)
                      .|||+++|+ ||+||++|+|||++||+.. |+..  ++.+|++|           ++| |+|++ |+|+|+++++    .
T Consensus         1 ~Ggw~~idv-~~~iqela~FAV~e~nk~~~~~~L--~f~~Vv~~~~~~~~~~~~~~~Q-VaG~n-Y~Ltlea~d~----~   71 (97)
T 2o9u_X            1 MGEWEIIDI-GPFTQNLGKFAVDEENKIGQYGRL--TFNKVIRPCMKKTIYENEGFRE-IKGYE-YQLYVYASDK----L   71 (97)
T ss_dssp             -CCCEEECC-SHHHHHHHHHHHHHHHHHCTTCSC--CEEEEEEEEEEEEEECSSSSCS-EEEEE-EEEEEEETTE----E
T ss_pred             CCCceECCC-CHHHHHHHHHHHHHHhccccCCCc--EEEEEEEcccccccccchhhee-eccEE-EEEEEEEeCC----c
Confidence            389999999 9999999999999999986 6654  88999999           999 99999 5799999987    8


Q ss_pred             EEEEEEeCCC
Q 027502          207 HWVEIIKNSE  216 (222)
Q Consensus       207 ~~~~v~~~~~  216 (222)
                      |+|+||++|-
T Consensus        72 yeA~V~ekpw   81 (97)
T 2o9u_X           72 FRADISEDYK   81 (97)
T ss_dssp             C-CEEEEETT
T ss_pred             eEEEEEEecC
Confidence            9999999984

>2oct_A Cystatin B; stefin, amyloid, domain-swapping, hand shaking, PR isomerization, protein binding; 1.40A {Homo sapiens} PDB: 1stf_I*

Probab=99.67  E-value=1.4e-16  Score=119.21  Aligned_cols=78  Identities=12%  Similarity=0.152  Sum_probs=68.0

Q ss_pred             CCCcceeccCCCHHHHHHHHHHHHHHHhhccCccceeEEEEEEeeeeeecceeEEEEEEEEccCCccceEEEEEEeCC--
Q 027502          138 HGQEWLAVSTNDLEVKNAANHAVKSMQRKSNSLFLYELLEILQAKAKVIEDYAKFELHLKLRRGSEEEKHWVEIIKNS--  215 (222)
Q Consensus       138 ~~gg~~~i~~~d~~v~e~a~fAv~~~N~~sn~~~~~~~~kV~~a~~QVVaG~~yy~l~l~~~~g~~~~~~~~~v~~~~--  215 (222)
                      ++|||++++++||++|++++||+.++|+.+|..|  ++.+|+++++|||||+|| .|+++++++.   -+.+.|++..  
T Consensus         2 m~GG~~~~~~~~~evq~i~~~a~~~~n~~~~~~~--~~~~vv~~~tQVVAG~NY-~ikv~v~~~~---~~h~~vy~~lp~   75 (98)
T 2oct_A            2 MSGAPSATQPATAETQHIADQVRSQLEEKYNKKF--PVFKAVSFKSQVVAGTNY-FIKVHVGDED---FVHLRVFQSLPH   75 (98)
T ss_dssp             CCSSCCCCEECCHHHHHHHHHHHHHHHHHHTSCC--SCCEEEEEEEEEEEEEEE-EEEEECSTTC---EEEEEEEEESST
T ss_pred             CcccCcCCCCCCHHHHHHHHHHHHHHHhhcCCcc--ceeEEEEEEEEEeCCEEE-EEEEEECCCc---EEEEEEEecCCC
Confidence            5799999999999999999999999999999886  889999999999999996 6999998864   4678888876  


Q ss_pred             -CCceec
Q 027502          216 -EGKFYL  221 (222)
Q Consensus       216 -~~~~~~  221 (222)
                       ++.+.|
T Consensus        76 ~~~~~~l   82 (98)
T 2oct_A           76 ENKSLTL   82 (98)
T ss_dssp             TCCCEEE
T ss_pred             CCCceEE
Confidence             455544

>2bo9_B Human latexin, MUM; metallocarboxypeptidase, X-RAY endogenous protein inhibitor, metalloprotease carboxypeptidase, hydrolase; HET: NAG; 1.6A {Homo sapiens} SCOP: d.17.1.5 d.17.1.5 PDB: 1wnh_A

Probab=96.25  E-value=0.41  Score=39.79  Aligned_cols=168  Identities=14%  Similarity=0.053  Sum_probs=104.0

Q ss_pred             CCCHHHHHHHHHHHHHHHhhcCCc---eeEEEEEEEEEEeec--cEEEEEEEEEEe---CCcceEEEEEEEEec-CCCce
Q 027502           42 QNSAEIEGLARFAVQEHNKKENAL---LQFARVLKAKEQVVA--GKLYYLTLEVID---AGKNKIYEAKIWVKP-WINFK  112 (222)
Q Consensus        42 ~~d~~v~~~a~fAv~~~N~~sn~~---~~~~kV~~a~~QVVa--G~nY~l~v~v~~---~~~~~~c~~~V~~~P-W~~~~  112 (222)
                      ++.-..+.+|+-|+.-+|-..+++   +.+..|-+|..+++.  |.+|.|++.+.+   .+....|.|+|+-.+ -.+..
T Consensus         5 psh~~a~rAA~vA~hy~N~~~gSP~~l~~L~~V~~a~a~~ip~~G~Ky~l~Fs~e~~~~~~~~~~CsA~Vlf~~~~qk~~   84 (222)
T 2bo9_B            5 PTNYPASRAALVAQNYINYQQGTPHRVFEVQKVKQASMEDIPGRGHKYRLKFAVEEIIQKQVKVNCTAEVLYPSTGQETA   84 (222)
T ss_dssp             TTSHHHHHHHHHHHHHHHHHHCBTTBCEEEEEEEEEEEEEETTTEEEEEEEEEEEETTTCCCEEEEEEEEEEECTTCCCC
T ss_pred             CcchHHHHHHHHHHHHhhcccCCCceeeehhhhhhhhhhhccCCCcEEEEEEEeeeeecCCceeEEEEEEEEccCCCCCC
Confidence            356678899999999999998887   456899999999985  789999999998   366889999999864 23445


Q ss_pred             eeEEEeeCCCCCCcc-ccccc----ccccCCCCcceeccC----CCHHHHHHHHHHH--HHHHhh--ccCccceeEEEEE
Q 027502          113 QLQEFKHAEHGPFSA-LSDLN----LKRGCHGQEWLAVST----NDLEVKNAANHAV--KSMQRK--SNSLFLYELLEIL  179 (222)
Q Consensus       113 ~l~s~~c~~~~~~~~-~~~~~----~k~~~~~gg~~~i~~----~d~~v~e~a~fAv--~~~N~~--sn~~~~~~~~kV~  179 (222)
                      --.++.|.......+ ..|..    .+....+---.+||.    -+|+..-.-..|.  ..|=.-  |...-.|+...|.
T Consensus        85 P~Vn~tc~~~~~kn~~eeD~~fY~~~k~~~~Pl~a~~IPDs~G~v~p~m~p~w~La~v~ssyvmw~~Ste~t~Y~maqis  164 (222)
T 2bo9_B           85 PEVNFTFEGETGKNPDEEDNTFYQRLKSMKEPLEAQNIPDNFGNVSPEMTLVLHLAWVACGYIIWQNSTEDTWYKMVKIQ  164 (222)
T ss_dssp             CEEEEEESSCCCCCCHHHHHHHHHHHHHCSSCCEEEEESCTTSCCCHHHHHHHHHHHHHHHHHHHHHCCTTCCEEEEEEE
T ss_pred             CceEEEEecccccCCchHHHHHHHHHhhccCccccccCCCccCCCCccceehhhhhhhcceEEEEeccchhhhhhhhhcc
Confidence            566889987643211 11100    000000001112321    2566655443433  223222  3333456888888


Q ss_pred             Eeeeeee-cceeEEEEEEEEccCCccceEEE
Q 027502          180 QAKAKVI-EDYAKFELHLKLRRGSEEEKHWV  209 (222)
Q Consensus       180 ~a~~QVV-aG~~yy~l~l~~~~g~~~~~~~~  209 (222)
                      +.+++-- +...-|+.+|-+-+=+..|+--+
T Consensus       165 sVkQ~k~~Dd~i~FdYtvLLHe~~sQEIIpw  195 (222)
T 2bo9_B          165 TVKQVQRNDDFIELDYTILLHNIASQEIIPW  195 (222)
T ss_dssp             EEEEECCSSSCEEEEEEEEEEETTTTEEEEE
T ss_pred             eeeeecccCCeeeeceeEEEeecccccceee
Confidence            8775543 23222788888888777665333

>1kwi_A Protegrin-3 precursor; cathelicidin motif, disulfide, MAD, selenocystine, antimicrobial protein; 2.19A {Sus scrofa} SCOP: d.17.1.3 PDB: 1lxe_A 1n5h_A 1n5p_A 1pfp_A

Probab=93.05  E-value=0.37  Score=35.46  Aligned_cols=70  Identities=10%  Similarity=0.072  Sum_probs=42.1

Q ss_pred             HHHHHHHHHHHHHHHhhcCCc--eeEEEEEEEEEEee-ccEEEEEEEEEEeC------------------CcceEEEEEE
Q 027502           45 AEIEGLARFAVQEHNKKENAL--LQFARVLKAKEQVV-AGKLYYLTLEVIDA------------------GKNKIYEAKI  103 (222)
Q Consensus        45 ~~v~~~a~fAv~~~N~~sn~~--~~~~kV~~a~~QVV-aG~nY~l~v~v~~~------------------~~~~~c~~~V  103 (222)
                      -.+++++..||+.||+++.+.  |++.+..-.-.++. -|+.+.+.+.+.++                  |-.+.|.-.|
T Consensus         3 lsY~EAv~~Av~~~N~~S~~~nlFRLl~~~p~p~~~~d~~~~~~v~FtIkETvC~~~~~~~p~~CdFke~G~vk~C~Gtv   82 (101)
T 1kwi_A            3 LSYREAVLRAVDRLNEQSSEANLYRLLELDQPPKADEDPGTPKPVSFTVKETVCPRPTRQPPELCDFKENGRVKQCVGTV   82 (101)
T ss_dssp             HHHHHHHHHHHHHHHHHCCSSEEEEEEEEC---------CCCEEEEEEEEEEEEESSCCSCGGGSCBCTTCCEEEEEEEE
T ss_pred             cCHHHHHHHHHHHHhcCCCccceeeeecccCCCccCCCCCCcceeEEEEeeeecCCCCCCCcccCCccCCCeeeeceEEE
Confidence            357899999999999998655  44444333222232 35778888888863                  5666788888


Q ss_pred             EEecCCCceee
Q 027502          104 WVKPWINFKQL  114 (222)
Q Consensus       104 ~~~PW~~~~~l  114 (222)
                      ...+......|
T Consensus        83 ~~~~~~~~~~i   93 (101)
T 1kwi_A           83 TLDQIKDPLDI   93 (101)
T ss_dssp             CCC----CCEE
T ss_pred             EecCCCceEEe
Confidence            77654433333

>1kwi_A Protegrin-3 precursor; cathelicidin motif, disulfide, MAD, selenocystine, antimicrobial protein; 2.19A {Sus scrofa} SCOP: d.17.1.3 PDB: 1lxe_A 1n5h_A 1n5p_A 1pfp_A

Probab=91.31  E-value=0.36  Score=35.54  Aligned_cols=53  Identities=23%  Similarity=0.215  Sum_probs=35.0

Q ss_pred             HHHHHHHHHHHHHHhhccCccceeEEEEEEeeeeee-cceeE-EEEEEEEccCCc
Q 027502          151 EVKNAANHAVKSMQRKSNSLFLYELLEILQAKAKVI-EDYAK-FELHLKLRRGSE  203 (222)
Q Consensus       151 ~v~e~a~fAv~~~N~~sn~~~~~~~~kV~~a~~QVV-aG~~y-y~l~l~~~~g~~  203 (222)
                      .++||+..||++||++|.+.++|++.+..-...++. -|+.+ ..++|+-+.+.+
T Consensus         4 sY~EAv~~Av~~~N~~S~~~nlFRLl~~~p~p~~~~d~~~~~~v~FtIkETvC~~   58 (101)
T 1kwi_A            4 SYREAVLRAVDRLNEQSSEANLYRLLELDQPPKADEDPGTPKPVSFTVKETVCPR   58 (101)
T ss_dssp             HHHHHHHHHHHHHHHHCCSSEEEEEEEEC---------CCCEEEEEEEEEEEEES
T ss_pred             CHHHHHHHHHHHHhcCCCccceeeeecccCCCccCCCCCCcceeEEEEeeeecCC
Confidence            578999999999999999999999999776554443 33332 456666665443

>2bo9_B Human latexin, MUM; metallocarboxypeptidase, X-RAY endogenous protein inhibitor, metalloprotease carboxypeptidase, hydrolase; HET: NAG; 1.6A {Homo sapiens} SCOP: d.17.1.5 d.17.1.5 PDB: 1wnh_A

Probab=80.03  E-value=8.2  Score=31.99  Aligned_cols=68  Identities=13%  Similarity=0.199  Sum_probs=52.1

Q ss_pred             eccCCCHHHHHHHHHHHHHHHhhccCcc-ceeEEEEEEeeeeeecce--eEEEEEEEEccCCc---cceEEEEEE
Q 027502          144 AVSTNDLEVKNAANHAVKSMQRKSNSLF-LYELLEILQAKAKVIEDY--AKFELHLKLRRGSE---EEKHWVEII  212 (222)
Q Consensus       144 ~i~~~d~~v~e~a~fAv~~~N~~sn~~~-~~~~~kV~~a~~QVVaG~--~yy~l~l~~~~g~~---~~~~~~~v~  212 (222)
                      +++++--..++||+-|+.=+|-...+.+ .|.+.+|.+|+.+++.|.  + |+|+..+.+--.   ..+=-|+|.
T Consensus         2 ei~psh~~a~rAA~vA~hy~N~~~gSP~~l~~L~~V~~a~a~~ip~~G~K-y~l~Fs~e~~~~~~~~~~CsA~Vl   75 (222)
T 2bo9_B            2 EIPPTNYPASRAALVAQNYINYQQGTPHRVFEVQKVKQASMEDIPGRGHK-YRLKFAVEEIIQKQVKVNCTAEVL   75 (222)
T ss_dssp             BCCTTSHHHHHHHHHHHHHHHHHHCBTTBCEEEEEEEEEEEEEETTTEEE-EEEEEEEEETTTCCCEEEEEEEEE
T ss_pred             CCCCcchHHHHHHHHHHHHhhcccCCCceeeehhhhhhhhhhhccCCCcE-EEEEEEeeeeecCCceeEEEEEEE
Confidence            3556666789999999999999988876 578899999999999776  5 678888887322   234456654

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	222
d1eqka_	102	d.17.1.2 (A:) Phytocystatin {Japanese rice (Oryza	4e-33
d1roaa_	111	d.17.1.2 (A:) Cystatin D {Human (Homo sapiens) [Ta	5e-20
d1roaa_	111	d.17.1.2 (A:) Cystatin D {Human (Homo sapiens) [Ta	8e-05
d1r4ca_	110	d.17.1.2 (A:) Cystatin C {Human (Homo sapiens) [Ta	3e-17
d1r4ca_	110	d.17.1.2 (A:) Cystatin C {Human (Homo sapiens) [Ta	5e-06
d1cewi_	108	d.17.1.2 (I:) Cystatin {Chicken (Gallus gallus) [T	3e-17
d1cewi_	108	d.17.1.2 (I:) Cystatin {Chicken (Gallus gallus) [T	2e-06
d1kwia_	98	d.17.1.3 (A:) Cathelicidin motif of protegrin-3 {P	1e-04
d1kwia_	98	d.17.1.3 (A:) Cathelicidin motif of protegrin-3 {P	0.003

>d1eqka_ d.17.1.2 (A:) Phytocystatin {Japanese rice (Oryza sativa), subsp. japonica, oryzacystatin-I [TaxId: 4530]} Length = 102

class: Alpha and beta proteins (a+b)
fold: Cystatin-like
superfamily: Cystatin/monellin
family: Cystatins
domain: Phytocystatin
species: Japanese rice (Oryza sativa), subsp. japonica, oryzacystatin-I [TaxId: 4530]

 Score =  113 bits (283), Expect = 4e-33
 Identities = 49/96 (51%), Positives = 65/96 (67%), Gaps = 1/96 (1%)

Query: 29  QMRPGGVYDYGGNQNSAEIEGLARFAVQEHNKKENALLQFARVLKAKEQVVAGKLYYLTL 88
               GGV   G N+N   +  LARFAV EHNKK N+LL+F +++  K+QVVAG LYY T+
Sbjct: 6   GPVLGGVEPVG-NENDLHLVDLARFAVTEHNKKANSLLEFEKLVSVKQQVVAGTLYYFTI 64

Query: 89  EVIDAGKNKIYEAKIWVKPWINFKQLQEFKHAEHGP 124
           EV +    K+YEAK+W KPW++FK+LQEFK  +   
Sbjct: 65  EVKEGDAKKLYEAKVWEKPWMDFKELQEFKPVDASA 100

>d1roaa_ d.17.1.2 (A:) Cystatin D {Human (Homo sapiens) [TaxId: 9606]} Length = 111

class: Alpha and beta proteins (a+b)
fold: Cystatin-like
superfamily: Cystatin/monellin
family: Cystatins
domain: Cystatin D
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 79.7 bits (196), Expect = 5e-20
 Identities = 20/109 (18%), Positives = 40/109 (36%), Gaps = 25/109 (22%)

Query: 33  GGVYDYGGNQNSAEIEGLARFAVQEHNKKENA---LLQFARVLKAKEQVVAGKLYYLTLE 89
           GG++    + N   ++    FA+ E+NK  N      +  +V+ A +Q+V G  YY  ++
Sbjct: 1   GGIHAT--DLNDKSVQRALDFAISEYNKVINKDEYYSRPLQVMAAYQQIVGGVNYYFNVK 58

Query: 90  VIDAG--------------------KNKIYEAKIWVKPWINFKQLQEFK 118
                                    + +    +I   PW +   +  +K
Sbjct: 59  FGRTTCTKSQPNLDNCPFNDQPKLKEEEFCSFQINEVPWEDKISILNYK 107

>d1roaa_ d.17.1.2 (A:) Cystatin D {Human (Homo sapiens) [TaxId: 9606]} Length = 111

class: Alpha and beta proteins (a+b)
fold: Cystatin-like
superfamily: Cystatin/monellin
family: Cystatins
domain: Cystatin D
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.4 bits (89), Expect = 8e-05
 Identities = 9/45 (20%), Positives = 19/45 (42%), Gaps = 1/45 (2%)

Query: 142 WLAVSTNDLEVKNAANHAVKSMQRKSNS-LFLYELLEILQAKAKV 185
             A   ND  V+ A + A+    +  N   +    L+++ A  ++
Sbjct: 3   IHATDLNDKSVQRALDFAISEYNKVINKDEYYSRPLQVMAAYQQI 47

>d1r4ca_ d.17.1.2 (A:) Cystatin C {Human (Homo sapiens) [TaxId: 9606]} Length = 110

class: Alpha and beta proteins (a+b)
fold: Cystatin-like
superfamily: Cystatin/monellin
family: Cystatins
domain: Cystatin C
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 72.4 bits (177), Expect = 3e-17
 Identities = 23/108 (21%), Positives = 40/108 (37%), Gaps = 24/108 (22%)

Query: 33  GGVYDYGGNQNSAEIEGLARFAVQEHNKKENALLQFA--RVLKAKEQVVAGKLYYLTLEV 90
           GG  D   +     +     FAV E+NK  N +      +V++A++Q+VAG  Y+L +E+
Sbjct: 1   GGPMDA--SVEEEGVRRALDFAVGEYNKASNDMYHSRALQVVRARKQIVAGVNYFLDVEL 58

Query: 91  I--------------------DAGKNKIYEAKIWVKPWINFKQLQEFK 118
                                   +      +I+  PW     L +  
Sbjct: 59  GRTTCTKTQPNLDNCPFHDQPHLKRKAFCSFQIYAVPWQGTMTLSKST 106

>d1r4ca_ d.17.1.2 (A:) Cystatin C {Human (Homo sapiens) [TaxId: 9606]} Length = 110

class: Alpha and beta proteins (a+b)
fold: Cystatin-like
superfamily: Cystatin/monellin
family: Cystatins
domain: Cystatin C
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 42.0 bits (98), Expect = 5e-06
 Identities = 9/44 (20%), Positives = 23/44 (52%)

Query: 142 WLAVSTNDLEVKNAANHAVKSMQRKSNSLFLYELLEILQAKAKV 185
            +  S  +  V+ A + AV    + SN ++    L++++A+ ++
Sbjct: 3   PMDASVEEEGVRRALDFAVGEYNKASNDMYHSRALQVVRARKQI 46

>d1cewi_ d.17.1.2 (I:) Cystatin {Chicken (Gallus gallus) [TaxId: 9031]} Length = 108

class: Alpha and beta proteins (a+b)
fold: Cystatin-like
superfamily: Cystatin/monellin
family: Cystatins
domain: Cystatin
species: Chicken (Gallus gallus) [TaxId: 9031]

 Score = 72.4 bits (177), Expect = 3e-17
 Identities = 24/108 (22%), Positives = 41/108 (37%), Gaps = 24/108 (22%)

Query: 33  GGVYDYGGNQNSAEIEGLARFAVQEHNKKENALLQFA--RVLKAKEQVVAGKLYYLTLEV 90
           G       ++N   ++   +FA+ E+N+  N        RV+ AK Q+V+G  Y L +E+
Sbjct: 1   GAPVPV--DENDEGLQRALQFAMAEYNRASNDKYSSRVVRVISAKRQLVSGIKYILQVEI 58

Query: 91  IDAG--------------------KNKIYEAKIWVKPWINFKQLQEFK 118
                                   K       ++  PW+N  +L E K
Sbjct: 59  GRTTCPKSSGDLQSCEFHDEPEMAKYTTCTFVVYSIPWLNQIKLLESK 106

>d1cewi_ d.17.1.2 (I:) Cystatin {Chicken (Gallus gallus) [TaxId: 9031]} Length = 108

class: Alpha and beta proteins (a+b)
fold: Cystatin-like
superfamily: Cystatin/monellin
family: Cystatins
domain: Cystatin
species: Chicken (Gallus gallus) [TaxId: 9031]

 Score = 43.1 bits (101), Expect = 2e-06
 Identities = 10/43 (23%), Positives = 20/43 (46%)

Query: 142 WLAVSTNDLEVKNAANHAVKSMQRKSNSLFLYELLEILQAKAK 184
            + V  ND  ++ A   A+    R SN  +   ++ ++ AK +
Sbjct: 3   PVPVDENDEGLQRALQFAMAEYNRASNDKYSSRVVRVISAKRQ 45

>d1kwia_ d.17.1.3 (A:) Cathelicidin motif of protegrin-3 {Pig (Sus scrofa) [TaxId: 9823]} Length = 98

class: Alpha and beta proteins (a+b)
fold: Cystatin-like
superfamily: Cystatin/monellin
family: Cathelicidin motif
domain: Cathelicidin motif of protegrin-3
species: Pig (Sus scrofa) [TaxId: 9823]

 Score = 37.7 bits (87), Expect = 1e-04
 Identities = 11/51 (21%), Positives = 20/51 (39%)

Query: 150 LEVKNAANHAVKSMQRKSNSLFLYELLEILQAKAKVIEDYAKFELHLKLRR 200
           L  + A   AV  +  +S+   LY LLE+ Q      +      +   ++ 
Sbjct: 2   LSYREAVLRAVDRLNEQSSEANLYRLLELDQPPKADEDPGTPKPVSFTVKE 52

>d1kwia_ d.17.1.3 (A:) Cathelicidin motif of protegrin-3 {Pig (Sus scrofa) [TaxId: 9823]} Length = 98

class: Alpha and beta proteins (a+b)
fold: Cystatin-like
superfamily: Cystatin/monellin
family: Cathelicidin motif
domain: Cathelicidin motif of protegrin-3
species: Pig (Sus scrofa) [TaxId: 9823]

 Score = 33.8 bits (77), Expect = 0.003
 Identities = 8/86 (9%), Positives = 22/86 (25%), Gaps = 21/86 (24%)

Query: 51  ARFAVQEHNKKENALLQFA--RVLKAKEQVV-AGKLYYLTLEV---------------ID 92
              AV   N++ +    +    + +  +     G    ++  V                D
Sbjct: 8   VLRAVDRLNEQSSEANLYRLLELDQPPKADEDPGTPKPVSFTVKETVCPRPTRQPPELCD 67

Query: 93  AGKN---KIYEAKIWVKPWINFKQLQ 115
             +N   K     + +    +   + 
Sbjct: 68  FKENGRVKQCVGTVTLDQIKDPLDIT 93

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	222
d1eqka_	102	Phytocystatin {Japanese rice (Oryza sativa), subsp	99.96
d1roaa_	111	Cystatin D {Human (Homo sapiens) [TaxId: 9606]}	99.9
d1r4ca_	110	Cystatin C {Human (Homo sapiens) [TaxId: 9606]}	99.9
d1cewi_	108	Cystatin {Chicken (Gallus gallus) [TaxId: 9031]}	99.89
d1eqka_	102	Phytocystatin {Japanese rice (Oryza sativa), subsp	99.84
d1roaa_	111	Cystatin D {Human (Homo sapiens) [TaxId: 9606]}	99.77
d1cewi_	108	Cystatin {Chicken (Gallus gallus) [TaxId: 9031]}	99.75
d1r4ca_	110	Cystatin C {Human (Homo sapiens) [TaxId: 9606]}	99.74
d1stfi_	98	Cystatin B (stefin B) {Human (Homo sapiens) [TaxId	99.5
d1nb5i_	98	Cystatin A (stefin A) {Human (Homo sapiens) [TaxId	99.39
d1kwia_	98	Cathelicidin motif of protegrin-3 {Pig (Sus scrofa	99.39
d1stfi_	98	Cystatin B (stefin B) {Human (Homo sapiens) [TaxId	99.03
d1kwia_	98	Cathelicidin motif of protegrin-3 {Pig (Sus scrofa	99.03
d1nb5i_	98	Cystatin A (stefin A) {Human (Homo sapiens) [TaxId	98.71
d2bo9b1	98	Latexin {Human (Homo sapiens) [TaxId: 9606]}	97.42
d2bo9b1	98	Latexin {Human (Homo sapiens) [TaxId: 9606]}	93.09
d2o9ux1	96	Monellin, B & A chains together {Serendipity berry	86.74

>d1eqka_ d.17.1.2 (A:) Phytocystatin {Japanese rice (Oryza sativa), subsp. japonica, oryzacystatin-I [TaxId: 4530]}

class: Alpha and beta proteins (a+b)
fold: Cystatin-like
superfamily: Cystatin/monellin
family: Cystatins
domain: Phytocystatin
species: Japanese rice (Oryza sativa), subsp. japonica, oryzacystatin-I [TaxId: 4530]

Probab=99.96  E-value=1.9e-28  Score=183.25  Aligned_cols=94  Identities=52%  Similarity=0.899  Sum_probs=89.8

Q ss_pred             ccCCceeeeCCCCCCCHHHHHHHHHHHHHHHhhcCCceeEEEEEEEEEEeeccEEEEEEEEEEeCCcceEEEEEEEEecC
Q 027502           29 QMRPGGVYDYGGNQNSAEIEGLARFAVQEHNKKENALLQFARVLKAKEQVVAGKLYYLTLEVIDAGKNKIYEAKIWVKPW  108 (222)
Q Consensus        29 ~~l~GG~~~i~~~~~d~~v~~~a~fAv~~~N~~sn~~~~~~kV~~a~~QVVaG~nY~l~v~v~~~~~~~~c~~~V~~~PW  108 (222)
                      ..++|||++++ +.+||+++++++||+.+||+.+++.|+|++|++|++|||+|+||+|++++.+++..+.|+++||++||
T Consensus         6 ~~l~GG~~~i~-d~nd~~v~e~a~~Av~~~N~~~~~~~~~vkV~~a~~QVVaG~~Y~i~v~~~~~~~~k~c~~~Vw~~pW   84 (102)
T d1eqka_           6 GPVLGGVEPVG-NENDLHLVDLARFAVTEHNKKANSLLEFEKLVSVKQQVVAGTLYYFTIEVKEGDAKKLYEAKVWEKPW   84 (102)
T ss_dssp             CSCSSSSEEEC-CTTCHHHHHHHHHHHHHHHHHTTCCEEEEEEEEEEEEESSSEEEEEEEEEEETTCCEEEEEEEEEBTT
T ss_pred             CcccCCcccCC-CCCCHHHHHHHHHHHHHHhhcCCCceEEEEEEEEeeeeccceeEEEEEEEccCCccEEEEEEEEEeeC
Confidence            66899999985 37999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCceeeEEEeeCCCC
Q 027502          109 INFKQLQEFKHAEHG  123 (222)
Q Consensus       109 ~~~~~l~s~~c~~~~  123 (222)
                      +++++|++|+|.+..
T Consensus        85 ~~~~~l~~f~~~~~~   99 (102)
T d1eqka_          85 MDFKELQEFKPVDAS   99 (102)
T ss_dssp             TTBCCEEEEECCCCC
T ss_pred             CCccEEEEEEEcCCC
Confidence            999999999999864

>d1roaa_ d.17.1.2 (A:) Cystatin D {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Cystatin-like
superfamily: Cystatin/monellin
family: Cystatins
domain: Cystatin D
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.90  E-value=7.4e-24  Score=160.04  Aligned_cols=86  Identities=23%  Similarity=0.345  Sum_probs=79.2

Q ss_pred             ceeeeCCCCCCCHHHHHHHHHHHHHHHhhcCC-c--eeEEEEEEEEEEeeccEEEEEEEEEEeC----------------
Q 027502           33 GGVYDYGGNQNSAEIEGLARFAVQEHNKKENA-L--LQFARVLKAKEQVVAGKLYYLTLEVIDA----------------   93 (222)
Q Consensus        33 GG~~~i~~~~~d~~v~~~a~fAv~~~N~~sn~-~--~~~~kV~~a~~QVVaG~nY~l~v~v~~~----------------   93 (222)
                      |||++++  ++||+++++|+||+.+||+++|+ .  |.+++|++|++|||+|++|+|+++++++                
T Consensus         1 GG~~~~~--~~d~~v~~~~~~Av~~~N~~sn~~~~~~~l~~V~~a~~QVVaG~~Y~l~~~i~~T~C~K~~~~~~~c~~~~   78 (111)
T d1roaa_           1 GGIHATD--LNDKSVQRALDFAISEYNKVINKDEYYSRPLQVMAAYQQIVGGVNYYFNVKFGRTTCTKSQPNLDNCPFND   78 (111)
T ss_dssp             CCEEEEC--TTSHHHHHHHHHHHHHHHHTTCCCSEEEEEEEEEEEEEEETTEEEEEEEEEEEEEEEETTSSCCSSCCBCC
T ss_pred             CCCccCC--CCCHHHHHHHHHHHHHHHHhcCCccceeEEEEEEEEEEEEecCcEEEEEEEEEeccccccccccccccccc
Confidence            9999998  79999999999999999999874 4  5679999999999999999999999863                


Q ss_pred             ----CcceEEEEEEEEecCCCceeeEEEeeC
Q 027502           94 ----GKNKIYEAKIWVKPWINFKQLQEFKHA  120 (222)
Q Consensus        94 ----~~~~~c~~~V~~~PW~~~~~l~s~~c~  120 (222)
                          ++...|+++||++||+++.+|++++|.
T Consensus        79 ~~~~~~~~~C~~~V~~~PW~~~~~v~~~~C~  109 (111)
T d1roaa_          79 QPKLKEEEFCSFQINEVPWEDKISILNYKCR  109 (111)
T ss_dssp             STTCCCCEEEEEEEEEETTTTEEEEEEEEEE
T ss_pred             CccccceEEEEEEEEEcccCCceEEeecccc
Confidence                357899999999999999999999996

>d1r4ca_ d.17.1.2 (A:) Cystatin C {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Cystatin-like
superfamily: Cystatin/monellin
family: Cystatins
domain: Cystatin C
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.90  E-value=1.7e-23  Score=157.62  Aligned_cols=87  Identities=26%  Similarity=0.442  Sum_probs=80.5

Q ss_pred             ceeeeCCCCCCCHHHHHHHHHHHHHHHhhcCCce--eEEEEEEEEEEeeccEEEEEEEEEEeC-----------------
Q 027502           33 GGVYDYGGNQNSAEIEGLARFAVQEHNKKENALL--QFARVLKAKEQVVAGKLYYLTLEVIDA-----------------   93 (222)
Q Consensus        33 GG~~~i~~~~~d~~v~~~a~fAv~~~N~~sn~~~--~~~kV~~a~~QVVaG~nY~l~v~v~~~-----------------   93 (222)
                      |||.+++  .|||+++++++||+.+||+++++.+  .+.+|++|++|||+|++|+|+++++++                 
T Consensus         1 Gg~~~~~--~~d~~v~~~~~~Av~~~N~~s~~~~~~~~~kV~~a~~QvVaG~~Y~l~~~i~~T~C~k~~~~~~~c~~~~~   78 (110)
T d1r4ca_           1 GGPMDAS--VEEEGVRRALDFAVGEYNKASNDMYHSRALQVVRARKQIVAGVNYFLDVELGRTTCTKTQPNLDNCPFHDQ   78 (110)
T ss_dssp             CCCEECC--TTSHHHHHHHHHHHHHHHHHCCCSEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEETTSSCGGGCCBCCS
T ss_pred             CCCccCC--CCCHHHHHHHHHHHHHHHhhCCccceeEEEEEEEEEEEeccCCEEEEEEEEeecccccCccccccCccccC
Confidence            8999998  7999999999999999999999985  569999999999999999999999862                 


Q ss_pred             ---CcceEEEEEEEEecCCCceeeEEEeeCC
Q 027502           94 ---GKNKIYEAKIWVKPWINFKQLQEFKHAE  121 (222)
Q Consensus        94 ---~~~~~c~~~V~~~PW~~~~~l~s~~c~~  121 (222)
                         ++...|+++||++||.++.+|++++|.+
T Consensus        79 ~~~~~~~~C~~~V~~~PW~~~~~l~~~~C~~  109 (110)
T d1r4ca_          79 PHLKRKAFCSFQIYAVPWQGTMTLSKSTCQD  109 (110)
T ss_dssp             TTTCCEEEEEEEEEEEGGGTEEEEEEEEEEE
T ss_pred             ccccceEEEEEEEEEeccCCceEEeeeeccC
Confidence               3577999999999999999999999974

>d1cewi_ d.17.1.2 (I:) Cystatin {Chicken (Gallus gallus) [TaxId: 9031]}

class: Alpha and beta proteins (a+b)
fold: Cystatin-like
superfamily: Cystatin/monellin
family: Cystatins
domain: Cystatin
species: Chicken (Gallus gallus) [TaxId: 9031]

Probab=99.89  E-value=3.8e-23  Score=155.14  Aligned_cols=86  Identities=28%  Similarity=0.416  Sum_probs=79.4

Q ss_pred             ceeeeCCCCCCCHHHHHHHHHHHHHHHhhcCCce--eEEEEEEEEEEeeccEEEEEEEEEEeC-----------------
Q 027502           33 GGVYDYGGNQNSAEIEGLARFAVQEHNKKENALL--QFARVLKAKEQVVAGKLYYLTLEVIDA-----------------   93 (222)
Q Consensus        33 GG~~~i~~~~~d~~v~~~a~fAv~~~N~~sn~~~--~~~kV~~a~~QVVaG~nY~l~v~v~~~-----------------   93 (222)
                      ||+.+++  .+||+++++++||+.+||+++++.|  .+++|++|++|||+|++|+|+++++++                 
T Consensus         1 Gg~~~~~--~~d~~v~~~~~~Av~~~N~~s~~~~~~~~~~V~~a~~QVVaG~~Y~l~~~i~~T~C~k~~~~~~~c~~~~~   78 (108)
T d1cewi_           1 GAPVPVD--ENDEGLQRALQFAMAEYNRASNDKYSSRVVRVISAKRQLVSGIKYILQVEIGRTTCPKSSGDLQSCEFHDE   78 (108)
T ss_dssp             CCCEECC--TTCHHHHHHHHHHTHHHHTTSCCSEEEEEEEEEEEEEEESSSEEEEEEEEEEEEEEETTCTTHHHHHHHHC
T ss_pred             CCCccCC--CCCHHHHHHHHHHHHHHHhcCCCcceEEEEEEEEEEEEeecCcEEEEEEEEEecccccccccccccccccC
Confidence            8999998  6999999999999999999999984  569999999999999999999999852                 


Q ss_pred             ---CcceEEEEEEEEecCCCceeeEEEeeC
Q 027502           94 ---GKNKIYEAKIWVKPWINFKQLQEFKHA  120 (222)
Q Consensus        94 ---~~~~~c~~~V~~~PW~~~~~l~s~~c~  120 (222)
                         ++...|+++||++||+++.+|++++|.
T Consensus        79 ~~~~~~~~C~~~V~~~pW~~~~~v~~~~Cq  108 (108)
T d1cewi_          79 PEMAKYTTCTFVVYSIPWLNQIKLLESKCQ  108 (108)
T ss_dssp             SSCSCEEEEEEEEEEETTTTEEEEEEEEEC
T ss_pred             cccCceEEEEEEEEEeccCCceEeeecccC
Confidence               356899999999999999999999994

>d1eqka_ d.17.1.2 (A:) Phytocystatin {Japanese rice (Oryza sativa), subsp. japonica, oryzacystatin-I [TaxId: 4530]}

class: Alpha and beta proteins (a+b)
fold: Cystatin-like
superfamily: Cystatin/monellin
family: Cystatins
domain: Phytocystatin
species: Japanese rice (Oryza sativa), subsp. japonica, oryzacystatin-I [TaxId: 4530]

Probab=99.84  E-value=5.8e-21  Score=142.16  Aligned_cols=80  Identities=20%  Similarity=0.262  Sum_probs=73.9

Q ss_pred             ccCCCCcceec-cCCCHHHHHHHHHHHHHHHhhccCccceeEEEEEEeeeeeecceeEEEEEEEEccCCccceEEEEEEe
Q 027502          135 RGCHGQEWLAV-STNDLEVKNAANHAVKSMQRKSNSLFLYELLEILQAKAKVIEDYAKFELHLKLRRGSEEEKHWVEIIK  213 (222)
Q Consensus       135 ~~~~~gg~~~i-~~~d~~v~e~a~fAv~~~N~~sn~~~~~~~~kV~~a~~QVVaG~~yy~l~l~~~~g~~~~~~~~~v~~  213 (222)
                      ++.++|||+++ ++|||+++++++||+++||+.+|+.|  ++.+|++|++|||+|++ |+|+|++.+++..+.|+++||+
T Consensus         5 ~~~l~GG~~~i~d~nd~~v~e~a~~Av~~~N~~~~~~~--~~vkV~~a~~QVVaG~~-Y~i~v~~~~~~~~k~c~~~Vw~   81 (102)
T d1eqka_           5 GGPVLGGVEPVGNENDLHLVDLARFAVTEHNKKANSLL--EFEKLVSVKQQVVAGTL-YYFTIEVKEGDAKKLYEAKVWE   81 (102)
T ss_dssp             SCSCSSSSEEECCTTCHHHHHHHHHHHHHHHHHTTCCE--EEEEEEEEEEEESSSEE-EEEEEEEEETTCCEEEEEEEEE
T ss_pred             CCcccCCcccCCCCCCHHHHHHHHHHHHHHhhcCCCce--EEEEEEEEeeeecccee-EEEEEEEccCCccEEEEEEEEE
Confidence            46689999998 69999999999999999999999986  78999999999999999 5899999999889999999999


Q ss_pred             CCCC
Q 027502          214 NSEG  217 (222)
Q Consensus       214 ~~~~  217 (222)
                      .|=.
T Consensus        82 ~pW~   85 (102)
T d1eqka_          82 KPWM   85 (102)
T ss_dssp             BTTT
T ss_pred             eeCC
Confidence            9843

>d1roaa_ d.17.1.2 (A:) Cystatin D {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Cystatin-like
superfamily: Cystatin/monellin
family: Cystatins
domain: Cystatin D
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.77  E-value=7.3e-19  Score=132.24  Aligned_cols=75  Identities=20%  Similarity=0.228  Sum_probs=66.2

Q ss_pred             CcceeccCCCHHHHHHHHHHHHHHHhhccC-ccceeEEEEEEeeeeeecceeEEEEEEEEccCC----------------
Q 027502          140 QEWLAVSTNDLEVKNAANHAVKSMQRKSNS-LFLYELLEILQAKAKVIEDYAKFELHLKLRRGS----------------  202 (222)
Q Consensus       140 gg~~~i~~~d~~v~e~a~fAv~~~N~~sn~-~~~~~~~kV~~a~~QVVaG~~yy~l~l~~~~g~----------------  202 (222)
                      |||+++|+|||+|+++|+||+.+||+++|+ .|+|++++|++|++|||+|++| +|+++++++.                
T Consensus         1 GG~~~~~~~d~~v~~~~~~Av~~~N~~sn~~~~~~~l~~V~~a~~QVVaG~~Y-~l~~~i~~T~C~K~~~~~~~c~~~~~   79 (111)
T d1roaa_           1 GGIHATDLNDKSVQRALDFAISEYNKVINKDEYYSRPLQVMAAYQQIVGGVNY-YFNVKFGRTTCTKSQPNLDNCPFNDQ   79 (111)
T ss_dssp             CCEEEECTTSHHHHHHHHHHHHHHHHTTCCCSEEEEEEEEEEEEEEETTEEEE-EEEEEEEEEEEETTSSCCSSCCBCCS
T ss_pred             CCCccCCCCCHHHHHHHHHHHHHHHHhcCCccceeEEEEEEEEEEEEecCcEE-EEEEEEEecccccccccccccccccC
Confidence            899999999999999999999999999985 7999999999999999999995 7999997531                


Q ss_pred             ----ccceEEEEEEeCC
Q 027502          203 ----EEEKHWVEIIKNS  215 (222)
Q Consensus       203 ----~~~~~~~~v~~~~  215 (222)
                          +...-.++||..|
T Consensus        80 ~~~~~~~~C~~~V~~~P   96 (111)
T d1roaa_          80 PKLKEEEFCSFQINEVP   96 (111)
T ss_dssp             TTCCCCEEEEEEEEEET
T ss_pred             ccccceEEEEEEEEEcc
Confidence                1234678899988

>d1cewi_ d.17.1.2 (I:) Cystatin {Chicken (Gallus gallus) [TaxId: 9031]}

class: Alpha and beta proteins (a+b)
fold: Cystatin-like
superfamily: Cystatin/monellin
family: Cystatins
domain: Cystatin
species: Chicken (Gallus gallus) [TaxId: 9031]

Probab=99.75  E-value=2.7e-18  Score=128.27  Aligned_cols=75  Identities=16%  Similarity=0.240  Sum_probs=66.9

Q ss_pred             CcceeccCCCHHHHHHHHHHHHHHHhhccCccceeEEEEEEeeeeeecceeEEEEEEEEcc--C----------------
Q 027502          140 QEWLAVSTNDLEVKNAANHAVKSMQRKSNSLFLYELLEILQAKAKVIEDYAKFELHLKLRR--G----------------  201 (222)
Q Consensus       140 gg~~~i~~~d~~v~e~a~fAv~~~N~~sn~~~~~~~~kV~~a~~QVVaG~~yy~l~l~~~~--g----------------  201 (222)
                      |||.++++|||+|+++++||+++||+++|+.|+|++++|++|++|||+|++ |+|++++++  +                
T Consensus         1 Gg~~~~~~~d~~v~~~~~~Av~~~N~~s~~~~~~~~~~V~~a~~QVVaG~~-Y~l~~~i~~T~C~k~~~~~~~c~~~~~~   79 (108)
T d1cewi_           1 GAPVPVDENDEGLQRALQFAMAEYNRASNDKYSSRVVRVISAKRQLVSGIK-YILQVEIGRTTCPKSSGDLQSCEFHDEP   79 (108)
T ss_dssp             CCCEECCTTCHHHHHHHHHHTHHHHTTSCCSEEEEEEEEEEEEEEESSSEE-EEEEEEEEEEEEETTCTTHHHHHHHHCS
T ss_pred             CCCccCCCCCHHHHHHHHHHHHHHHhcCCCcceEEEEEEEEEEEEeecCcE-EEEEEEEEecccccccccccccccccCc
Confidence            799999999999999999999999999999999999999999999999999 579999964  1                


Q ss_pred             --CccceEEEEEEeCC
Q 027502          202 --SEEEKHWVEIIKNS  215 (222)
Q Consensus       202 --~~~~~~~~~v~~~~  215 (222)
                        .+.....++||+.|
T Consensus        80 ~~~~~~~C~~~V~~~p   95 (108)
T d1cewi_          80 EMAKYTTCTFVVYSIP   95 (108)
T ss_dssp             SCSCEEEEEEEEEEET
T ss_pred             ccCceEEEEEEEEEec
Confidence              11235688999888

>d1r4ca_ d.17.1.2 (A:) Cystatin C {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Cystatin-like
superfamily: Cystatin/monellin
family: Cystatins
domain: Cystatin C
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.74  E-value=4.7e-18  Score=127.34  Aligned_cols=75  Identities=17%  Similarity=0.244  Sum_probs=66.8

Q ss_pred             CcceeccCCCHHHHHHHHHHHHHHHhhccCccceeEEEEEEeeeeeecceeEEEEEEEEccCC-----------------
Q 027502          140 QEWLAVSTNDLEVKNAANHAVKSMQRKSNSLFLYELLEILQAKAKVIEDYAKFELHLKLRRGS-----------------  202 (222)
Q Consensus       140 gg~~~i~~~d~~v~e~a~fAv~~~N~~sn~~~~~~~~kV~~a~~QVVaG~~yy~l~l~~~~g~-----------------  202 (222)
                      |||.++++|||+|+++++||+++||+++|+.|+|++.+|++|++|||+|++| +|+++++++.                 
T Consensus         1 Gg~~~~~~~d~~v~~~~~~Av~~~N~~s~~~~~~~~~kV~~a~~QvVaG~~Y-~l~~~i~~T~C~k~~~~~~~c~~~~~~   79 (110)
T d1r4ca_           1 GGPMDASVEEEGVRRALDFAVGEYNKASNDMYHSRALQVVRARKQIVAGVNY-FLDVELGRTTCTKTQPNLDNCPFHDQP   79 (110)
T ss_dssp             CCCEECCTTSHHHHHHHHHHHHHHHHHCCCSEEEEEEEEEEEEEEEEEEEEE-EEEEEEEEEEEETTSSCGGGCCBCCST
T ss_pred             CCCccCCCCCHHHHHHHHHHHHHHHhhCCccceeEEEEEEEEEEEeccCCEE-EEEEEEeecccccCccccccCccccCc
Confidence            7999999999999999999999999999999999999999999999999995 7999997521                 


Q ss_pred             ---ccceEEEEEEeCC
Q 027502          203 ---EEEKHWVEIIKNS  215 (222)
Q Consensus       203 ---~~~~~~~~v~~~~  215 (222)
                         +.....++||..|
T Consensus        80 ~~~~~~~C~~~V~~~P   95 (110)
T d1r4ca_          80 HLKRKAFCSFQIYAVP   95 (110)
T ss_dssp             TTCCEEEEEEEEEEEG
T ss_pred             cccceEEEEEEEEEec
Confidence               1225788888877

>d1stfi_ d.17.1.2 (I:) Cystatin B (stefin B) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Cystatin-like
superfamily: Cystatin/monellin
family: Cystatins
domain: Cystatin B (stefin B)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.50  E-value=3.3e-14  Score=103.89  Aligned_cols=86  Identities=22%  Similarity=0.300  Sum_probs=77.6

Q ss_pred             cCCceeeeCCCCCCCHHHHHHHHHHHHHHHhhcCCceeEEEEEEEEEEeeccEEEEEEEEEEeCCcceEEEEEEEEe-cC
Q 027502           30 MRPGGVYDYGGNQNSAEIEGLARFAVQEHNKKENALLQFARVLKAKEQVVAGKLYYLTLEVIDAGKNKIYEAKIWVK-PW  108 (222)
Q Consensus        30 ~l~GG~~~i~~~~~d~~v~~~a~fAv~~~N~~sn~~~~~~kV~~a~~QVVaG~nY~l~v~v~~~~~~~~c~~~V~~~-PW  108 (222)
                      ||+|||++..  +.+|++|++++.-..+++.++|..+...++++.++|||||+||+|.++++++.   .++++||.. |.
T Consensus         1 mm~GG~s~~~--~at~Eiq~i~d~Vk~~~e~k~~~k~~~f~av~yktQvVaG~NYfIKV~vg~~~---~~HlrV~~~Lp~   75 (98)
T d1stfi_           1 MMSGAPSATQ--PATAETQHIADQVRSQLEEKYNKKFPVFKAVSFKSQVVAGTNYFIKVHVGDED---FVHLRVFQSLPH   75 (98)
T ss_dssp             CCBSCCCCCE--ECCHHHHHHHHTTHHHHHHHHTCCCSCCEEEEEEEEESSEEEEEEEEECSSSC---EEEEEEEEECGG
T ss_pred             CcCCCCCCCC--CCCHHHHHHHHHHHHHHHHHcCCCcceeEEEEEEEEEEcceeEEEEEEeCCCc---EEEEEEeccCCC
Confidence            6899999987  58999999999999999999999998899999999999999999999999886   789999988 77


Q ss_pred             CC-ceeeEEEeeC
Q 027502          109 IN-FKQLQEFKHA  120 (222)
Q Consensus       109 ~~-~~~l~s~~c~  120 (222)
                      .+ ..+|+++.+.
T Consensus        76 ~~~~l~L~~~q~~   88 (98)
T d1stfi_          76 ENKPLTLSNYQTN   88 (98)
T ss_dssp             GCCCCEEEEEEEE
T ss_pred             CCCceEEEEEecC
Confidence            66 4688888664

>d1nb5i_ d.17.1.2 (I:) Cystatin A (stefin A) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Cystatin-like
superfamily: Cystatin/monellin
family: Cystatins
domain: Cystatin A (stefin A)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.39  E-value=9e-13  Score=95.96  Aligned_cols=86  Identities=24%  Similarity=0.322  Sum_probs=77.3

Q ss_pred             cCCceeeeCCCCCCCHHHHHHHHHHHHHHHhhcCCceeEEEEEEEEEEeeccEEEEEEEEEEeCCcceEEEEEEEEe-cC
Q 027502           30 MRPGGVYDYGGNQNSAEIEGLARFAVQEHNKKENALLQFARVLKAKEQVVAGKLYYLTLEVIDAGKNKIYEAKIWVK-PW  108 (222)
Q Consensus        30 ~l~GG~~~i~~~~~d~~v~~~a~fAv~~~N~~sn~~~~~~kV~~a~~QVVaG~nY~l~v~v~~~~~~~~c~~~V~~~-PW  108 (222)
                      ||+|||++..  ..++++|++++---.++..+.|..+...+.++.++|||||+||+|.+.++++.   .++++||.. |.
T Consensus         1 mm~GG~s~~~--~at~Eiq~I~d~Vk~~le~k~g~~~~~F~av~yktQvVAGtNYfIKV~vG~~~---~vHlrVf~~Lp~   75 (98)
T d1nb5i_           1 MIPGGLSEAK--PATPEIQEIVDKVKPQLEEKTNETYGKLEAVQYKTQVVAGTNYYIKVRAGDNK---YMHLKVFKSLPG   75 (98)
T ss_dssp             CCTTSCCCCE--ECCHHHHHHHHHHHHHHHHHHCCCCSCCEEEEEEEEESSEEEEEEEEECSSSC---EEEEEEEEECTT
T ss_pred             CccCCCCCCC--CCCHHHHHHHHHHHHHHHHhcCCCcceEEEEEEEEEEEcceeEEEEEEeCCCc---EEEEEEeccCCC
Confidence            6899999987  58999999999999999999999999999999999999999999999999886   799999998 76


Q ss_pred             CC-ceeeEEEeeC
Q 027502          109 IN-FKQLQEFKHA  120 (222)
Q Consensus       109 ~~-~~~l~s~~c~  120 (222)
                      .+ ..+|.++.+.
T Consensus        76 ~~~~l~L~~~q~~   88 (98)
T d1nb5i_          76 QNEDLVLTGYQVD   88 (98)
T ss_dssp             SCCCCEEEEEEEE
T ss_pred             CCCccEEEEEEcC
Confidence            65 5688887654

>d1kwia_ d.17.1.3 (A:) Cathelicidin motif of protegrin-3 {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a+b)
fold: Cystatin-like
superfamily: Cystatin/monellin
family: Cathelicidin motif
domain: Cathelicidin motif of protegrin-3
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=99.39  E-value=4.2e-13  Score=98.01  Aligned_cols=69  Identities=10%  Similarity=0.079  Sum_probs=51.0

Q ss_pred             HHHHHHHHHHHHHHhhcCCc--eeEEEEEEEEEEee-ccEEEEEEEEEEeC------------------CcceEEEEEEE
Q 027502           46 EIEGLARFAVQEHNKKENAL--LQFARVLKAKEQVV-AGKLYYLTLEVIDA------------------GKNKIYEAKIW  104 (222)
Q Consensus        46 ~v~~~a~fAv~~~N~~sn~~--~~~~kV~~a~~QVV-aG~nY~l~v~v~~~------------------~~~~~c~~~V~  104 (222)
                      .+++++++|+++||+++++.  |++.+|.+|+.|+| +|++|+|++++.++                  +..+.|++.||
T Consensus         3 sy~eav~~Al~~~N~~s~~~~~f~l~~v~~a~~q~v~~g~~y~l~f~i~eT~C~k~~~~~~~~C~~~~~~~~~~C~~~V~   82 (98)
T d1kwia_           3 SYREAVLRAVDRLNEQSSEANLYRLLELDQPPKADEDPGTPKPVSFTVKETVCPRPTRQPPELCDFKENGRVKQCVGTVT   82 (98)
T ss_dssp             HHHHHHHHHHHHHHHHCCSSEEEEEEEEC---------CCCEEEEEEEEEEEEESSCCSCGGGSCBCTTCCEEEEEEEEC
T ss_pred             CHHHHHHHHHHHHHcCCCCcccEEEEEEeecceeeecCCcEEEEEEEEEEeecCCcCCCChHHCccccCCcceEEEEEEE
Confidence            57899999999999999987  67799999999999 89999999999873                  56788999999


Q ss_pred             EecCCCceee
Q 027502          105 VKPWINFKQL  114 (222)
Q Consensus       105 ~~PW~~~~~l  114 (222)
                      .+||.+...|
T Consensus        83 ~~pw~~~~~v   92 (98)
T d1kwia_          83 LDQIKDPLDI   92 (98)
T ss_dssp             CC----CCEE
T ss_pred             EcCcCCEEEE
Confidence            9999987766

>d1stfi_ d.17.1.2 (I:) Cystatin B (stefin B) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Cystatin-like
superfamily: Cystatin/monellin
family: Cystatins
domain: Cystatin B (stefin B)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.03  E-value=1.7e-10  Score=83.82  Aligned_cols=74  Identities=12%  Similarity=0.182  Sum_probs=61.9

Q ss_pred             CCCcceeccCCCHHHHHHHHHHHHHHHhhccCccceeEEEEEEeeeeeecceeEEEEEEEEccCCccceEEEEEEeCCCC
Q 027502          138 HGQEWLAVSTNDLEVKNAANHAVKSMQRKSNSLFLYELLEILQAKAKVIEDYAKFELHLKLRRGSEEEKHWVEIIKNSEG  217 (222)
Q Consensus       138 ~~gg~~~i~~~d~~v~e~a~fAv~~~N~~sn~~~~~~~~kV~~a~~QVVaG~~yy~l~l~~~~g~~~~~~~~~v~~~~~~  217 (222)
                      ++|||++..+.+||+|+++..-..+.+..+|..|  ...+.++.++|||||+||| +.++++++.   ---..|++..++
T Consensus         2 m~GG~s~~~~at~Eiq~i~d~Vk~~~e~k~~~k~--~~f~av~yktQvVaG~NYf-IKV~vg~~~---~~HlrV~~~Lp~   75 (98)
T d1stfi_           2 MSGAPSATQPATAETQHIADQVRSQLEEKYNKKF--PVFKAVSFKSQVVAGTNYF-IKVHVGDED---FVHLRVFQSLPH   75 (98)
T ss_dssp             CBSCCCCCEECCHHHHHHHHTTHHHHHHHHTCCC--SCCEEEEEEEEESSEEEEE-EEEECSSSC---EEEEEEEEECGG
T ss_pred             cCCCCCCCCCCCHHHHHHHHHHHHHHHHHcCCCc--ceeEEEEEEEEEEcceeEE-EEEEeCCCc---EEEEEEeccCCC
Confidence            5799999999999999999999999999998876  7779999999999999975 999998863   234566666443

>d1kwia_ d.17.1.3 (A:) Cathelicidin motif of protegrin-3 {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a+b)
fold: Cystatin-like
superfamily: Cystatin/monellin
family: Cathelicidin motif
domain: Cathelicidin motif of protegrin-3
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=99.03  E-value=2.5e-10  Score=82.91  Aligned_cols=49  Identities=22%  Similarity=0.282  Sum_probs=37.8

Q ss_pred             HHHHHHHHHHHHHHhhccCccceeEEEEEEeeeeee-cceeEEEEEEEEcc
Q 027502          151 EVKNAANHAVKSMQRKSNSLFLYELLEILQAKAKVI-EDYAKFELHLKLRR  200 (222)
Q Consensus       151 ~v~e~a~fAv~~~N~~sn~~~~~~~~kV~~a~~QVV-aG~~yy~l~l~~~~  200 (222)
                      .++||+++||++||+++++.|+|++.+|++|+.|+| +|++| .|++++++
T Consensus         3 sy~eav~~Al~~~N~~s~~~~~f~l~~v~~a~~q~v~~g~~y-~l~f~i~e   52 (98)
T d1kwia_           3 SYREAVLRAVDRLNEQSSEANLYRLLELDQPPKADEDPGTPK-PVSFTVKE   52 (98)
T ss_dssp             HHHHHHHHHHHHHHHHCCSSEEEEEEEEC---------CCCE-EEEEEEEE
T ss_pred             CHHHHHHHHHHHHHcCCCCcccEEEEEEeecceeeecCCcEE-EEEEEEEE
Confidence            589999999999999999999999999999999999 89995 68888865

>d1nb5i_ d.17.1.2 (I:) Cystatin A (stefin A) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Cystatin-like
superfamily: Cystatin/monellin
family: Cystatins
domain: Cystatin A (stefin A)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.71  E-value=1.1e-08  Score=74.04  Aligned_cols=61  Identities=13%  Similarity=0.224  Sum_probs=54.3

Q ss_pred             CCCcceeccCCCHHHHHHHHHHHHHHHhhccCccceeEEEEEEeeeeeecceeEEEEEEEEccC
Q 027502          138 HGQEWLAVSTNDLEVKNAANHAVKSMQRKSNSLFLYELLEILQAKAKVIEDYAKFELHLKLRRG  201 (222)
Q Consensus       138 ~~gg~~~i~~~d~~v~e~a~fAv~~~N~~sn~~~~~~~~kV~~a~~QVVaG~~yy~l~l~~~~g  201 (222)
                      ++|||++..+-+||+|++++.--.++.+..|..|  ..-+.++-++|||||+||| +.|.++++
T Consensus         2 m~GG~s~~~~at~Eiq~I~d~Vk~~le~k~g~~~--~~F~av~yktQvVAGtNYf-IKV~vG~~   62 (98)
T d1nb5i_           2 IPGGLSEAKPATPEIQEIVDKVKPQLEEKTNETY--GKLEAVQYKTQVVAGTNYY-IKVRAGDN   62 (98)
T ss_dssp             CTTSCCCCEECCHHHHHHHHHHHHHHHHHHCCCC--SCCEEEEEEEEESSEEEEE-EEEECSSS
T ss_pred             ccCCCCCCCCCCHHHHHHHHHHHHHHHHhcCCCc--ceEEEEEEEEEEEcceeEE-EEEEeCCC
Confidence            6899999989999999999999999999988877  6777888899999999975 88888775

>d2bo9b1 d.17.1.5 (B:1-98) Latexin {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Cystatin-like
superfamily: Cystatin/monellin
family: Latexin-like
domain: Latexin
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.42  E-value=0.0034  Score=44.34  Aligned_cols=81  Identities=14%  Similarity=0.082  Sum_probs=62.5

Q ss_pred             CCCHHHHHHHHHHHHHHHhhcCCc---eeEEEEEEEEEEeec--cEEEEEEEEEEe---CCcceEEEEEEEEecCC-Cce
Q 027502           42 QNSAEIEGLARFAVQEHNKKENAL---LQFARVLKAKEQVVA--GKLYYLTLEVID---AGKNKIYEAKIWVKPWI-NFK  112 (222)
Q Consensus        42 ~~d~~v~~~a~fAv~~~N~~sn~~---~~~~kV~~a~~QVVa--G~nY~l~v~v~~---~~~~~~c~~~V~~~PW~-~~~  112 (222)
                      ++.-....+|+-|+.-+|-..+++   +.+.+|.+|..+++.  |-+|+|++.+.+   +.....|.|+|+-..-. +..
T Consensus         5 psh~pA~rAA~vA~hy~N~~~GSP~rl~~L~~V~~a~~e~ip~~G~Ky~L~Fs~e~~~~~e~~~~CsA~Vlfp~~~qk~a   84 (98)
T d2bo9b1           5 PTNYPASRAALVAQNYINYQQGTPHRVFEVQKVKQASMEDIPGRGHKYRLKFAVEEIIQKQVKVNCTAEVLYPSTGQETA   84 (98)
T ss_dssp             TTSHHHHHHHHHHHHHHHHHHCBTTBCEEEEEEEEEEEEEETTTEEEEEEEEEEEETTTCCCEEEEEEEEEEECTTCCCC
T ss_pred             CcchHHHHHHHHHHHHhhcccCCCceeeehhHHHhhhhhhccccCcEEEEEEEhhhcccccccceeEEEEEEcCCCCCCC
Confidence            466778899999999999998887   566999999999995  799999999998   34566899999884222 233


Q ss_pred             eeEEEeeCCC
Q 027502          113 QLQEFKHAEH  122 (222)
Q Consensus       113 ~l~s~~c~~~  122 (222)
                      --.++.|...
T Consensus        85 P~Vn~tceg~   94 (98)
T d2bo9b1          85 PEVNFTFEGE   94 (98)
T ss_dssp             CEEEEEESSC
T ss_pred             CeEEEEEEEe
Confidence            3446666643

>d2bo9b1 d.17.1.5 (B:1-98) Latexin {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Cystatin-like
superfamily: Cystatin/monellin
family: Latexin-like
domain: Latexin
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.09  E-value=0.27  Score=34.15  Aligned_cols=68  Identities=13%  Similarity=0.217  Sum_probs=52.5

Q ss_pred             eccCCCHHHHHHHHHHHHHHHhhccCcc-ceeEEEEEEeeeeeecce--eEEEEEEEEccCCccc---eEEEEEE
Q 027502          144 AVSTNDLEVKNAANHAVKSMQRKSNSLF-LYELLEILQAKAKVIEDY--AKFELHLKLRRGSEEE---KHWVEII  212 (222)
Q Consensus       144 ~i~~~d~~v~e~a~fAv~~~N~~sn~~~-~~~~~kV~~a~~QVVaG~--~yy~l~l~~~~g~~~~---~~~~~v~  212 (222)
                      +++|+.=.-++||+-|+.=+|-+..+.+ .|-+.+|.+|..+++.+.  + |+|++.+.+=..++   .=-|+|.
T Consensus         2 ei~psh~pA~rAA~vA~hy~N~~~GSP~rl~~L~~V~~a~~e~ip~~G~K-y~L~Fs~e~~~~~e~~~~CsA~Vl   75 (98)
T d2bo9b1           2 EIPPTNYPASRAALVAQNYINYQQGTPHRVFEVQKVKQASMEDIPGRGHK-YRLKFAVEEIIQKQVKVNCTAEVL   75 (98)
T ss_dssp             BCCTTSHHHHHHHHHHHHHHHHHHCBTTBCEEEEEEEEEEEEEETTTEEE-EEEEEEEEETTTCCCEEEEEEEEE
T ss_pred             CCCCcchHHHHHHHHHHHHhhcccCCCceeeehhHHHhhhhhhccccCcE-EEEEEEhhhcccccccceeEEEEE
Confidence            5677777889999999999999988875 578899999999999775  5 67888887633221   2445554

>d2o9ux1 d.17.1.1 (X:1001-1096) Monellin, B & A chains together {Serendipity berry (Dioscoreophyllum cumminsii) [TaxId: 3457]}

class: Alpha and beta proteins (a+b)
fold: Cystatin-like
superfamily: Cystatin/monellin
family: Monellin
domain: Monellin, B & A chains together
species: Serendipity berry (Dioscoreophyllum cumminsii) [TaxId: 3457]

Probab=86.74  E-value=2.8  Score=27.32  Aligned_cols=79  Identities=25%  Similarity=0.290  Sum_probs=49.9

Q ss_pred             ceeeeCCCCCCCHHHHHHHHHHHHHHHhhcC-CceeEEEEEEEEEEe----------eccEEEEEEEEEEeCCcceEEEE
Q 027502           33 GGVYDYGGNQNSAEIEGLARFAVQEHNKKEN-ALLQFARVLKAKEQV----------VAGKLYYLTLEVIDAGKNKIYEA  101 (222)
Q Consensus        33 GG~~~i~~~~~d~~v~~~a~fAv~~~N~~sn-~~~~~~kV~~a~~QV----------VaG~nY~l~v~v~~~~~~~~c~~  101 (222)
                      |.|.-++   --|-.|.+.+||+++-|+--. +.++|.+|++-...-          ..|..|.|-+-+.+    +.+.+
T Consensus         1 geweiid---igpftqnlgkfavdeenkigqygrltfnkvirpcmkktiyenegfreikgyeyqlyvyasd----klfra   73 (96)
T d2o9ux1           1 GEWEIID---IGPFTQNLGKFAVDEENKIGQYGRLTFNKVIRPCMKKTIYENEGFREIKGYEYQLYVYASD----KLFRA   73 (96)
T ss_dssp             CCCEEEC---CSHHHHHHHHHHHHHHHHHCTTCSCCEEEEEEEEEEEEEECSSSSCSEEEEEEEEEEEETT----EEC-C
T ss_pred             CCceEEE---ecchhhhhcceeecccccccccceeehhHHhHHHhhhhhhcccCceeccCcEEEEEEEecc----hhhhh
Confidence            6788887   469999999999999998754 348998888654221          24555555554432    24444


Q ss_pred             EEEEecCCCceeeEEEe
Q 027502          102 KIWVKPWINFKQLQEFK  118 (222)
Q Consensus       102 ~V~~~PW~~~~~l~s~~  118 (222)
                      .|-+.--...++|+.|.
T Consensus        74 disedyktrgrkllrfn   90 (96)
T d2o9ux1          74 DISEDYKTRGRKLLRFN   90 (96)
T ss_dssp             EEEEETTTCCEEEEECC
T ss_pred             hhhhhhhhccceeEecc
Confidence            45444333445565553