Citrus Sinensis ID: 027511

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220--
Protein Sequence
MRVKVRFIVGGDGPKRVRLEEMREKHSLQDRVEMLGAVPHAQVRSVLISGHIFLNSSLTEAFCIAILEAASCGLLTVSTRVGGVPEVLPDDMVVLAEPDPGDMVLAIRKAISLLPKIDPQVMHERMKKLYNWHDVAKRTEIVYDRALECPNQNLVERLSRYLSCGAWAGKLFCLVMIIDYLLWRFLELWKPAEDIEEVPDIVLPCQSDGESLKDCSEDQCLR
Secondary Structure (PSIPRED)
ccccEEEEEEEccccHHHHHHHHHHccccccEEEcccccHHHHHHHHHHccEEEEccccccccHHHHHHHHccccEEEccccccccccccccEEEEcccHHHHHHHHHHHHHccccccHHHHHHHHHHcccHHHHHHHHHHHHHHHHccccccHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
ccccEEEEEEcccccHHHHHHHHHHHccHHHEEEEccccHHHHHHHHHcccEEEcccHHHHHHHHHHHHHHcccEEEEEcccccccccccccEEEccccHHHHHHHHHHHHHHHHcccHHHHHHHHHHHccHHHHHHHHHHHHHHHHccccccHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHccHHHccccccccccccccccHcccccccHccc
Coil and Loop (DISEMBL)
MRVKVRFIvggdgpkrVRLEEMREKHSLQDRVEMLGAVPHAQVRSVLISGHIFLNSSLTEAFCIAILEAASCGLLTvstrvggvpevlpddmvvlaepdpgdMVLAIRKAISllpkidpqVMHERMKKLYNWHDVAKRTEIVYDralecpnqnLVERLSRYLSCGAWAGKLFCLVMIIDYLLWRFLElwkpaedieevpdivlpcqsdgeslkdcsedqclr
Flexible Loop (DISEMBL)
mrvkvrfivggdgpkrvrleeMREKHSLQDRVEMLGAVPHAQVRSVLISGHIFLNSSLTEAFCIAILEAASCGLLTVSTRVGGVPEVLPDDMVVLAEPDPGDMVLAIRKAISLLPKIDPQVMHERMKKLYNWHDVAKRTEIVYDRALECPNQNLVERLSRYLSCGAWAGKLFCLVMIIDYLLWRFLELWKPAEDIEEVPDIVLPCqsdgeslkdcsedqclr
Low Complexity Region (SEG)
MRVKVRFIVGGDGPKRVRLEEMREKHSLQDRVEMLGAVPHAQVRSVLISGHIFLNSSLTEAFCIAILEAASCGLLTVSTRVGGVPEVLPDDMVVLAEPDPGDMVLAIRKAISLLPKIDPQVMHERMKKLYNWHDVAKRTEIVYDRALECPNQNLVERLSRYLSCGAWAGKLFCLVMIIDYLLWRFLELWKPAEDIEEVPDIVLPCQSDGESLKDCSEDQCLR
Disordered region (IsUnstruct)
******FIV**********************VEMLGAVPHAQVRSVLISGHIFLNSSLTEAFCIAILEAASCGLLTVSTRVGGVPEVLPDDMVVLAEPDPGDMVLAIRKAISLLPKIDPQVMHERMKKLYNWHDVAKRTEIVYDRALECPNQNLVERLSRYLSCGAWAGKLFCLVMIIDYLLWRFLELWKPAEDIEEVPDIVLPC*****************
Disordered Region (DISOPRED)
*RVKVRFIVGGDGPKRVRLEEMREKHSLQDRVEMLGAVPHAQVRSVLISGHIFLNSSLTEAFCIAILEAASCGLLTVSTRVGGVPEVLPDDMVVLAEPDPGDMVLAIRKAISLLPKIDPQVMHERMKKLYNWHDVAKRTEIVYDRALECP*****ERLSRYLSCGAWAGKLFCLVMIIDYLLWRFLELWKPAEDIEEVPDIVL*******************
Disordered Region (DISEMBL)
MRVKVRFIVGGDGPKRVRLEEMREKHSLQDRVEMLGAVPHAQVRSVLISGHIFLNSSLTEAFCIAILEAASCGLLTVSTRVGGVPEVLPDDMVVLAEPDPGDMVLAIRKAISLLPKIDPQVMHERMKKLYNWHDVAKRTEIVYDRALECPNQNLVERLSRYLSCGAWAGKLFCLVMIIDYLLWRFLELWKPAEDIEEVPDIVLPCQS***************
Disordered Region (DISPRO)
**VKVRFIVGGDGPKRVRLEEMREKHSLQDRVEMLGAVPHAQVRSVLISGHIFLNSSLTEAFCIAILEAASCGLLTVSTRVGGVPEVLPDDMVVLAEPDPGDMVLAIRKAISLLPKIDPQVMHERMKKLYNWHDVAKRTEIVYDRALECPNQNLVERLSRYLSCGAWAGKLFCLVMIIDYLLWRFLELWKPAEDIEEVPDIV********************
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MRVKVRFIVGGDGPKRVRLEEMREKHSLQDRVEMLGAVPHAQVRSVLISGHIFLNSSLTEAFCIAILEAASCGLLTVSTRVGGVPEVLPDDMVVLAEPDPGDMVLAIRKAISLLPKIDPQVMHERMKKLYNWHDVAKRTEIVYDRALECPNQNLVERLSRYLSCGAWAGKLFCLVMIIDYLLWRFLELWKPAEDIEEVPDIVLPCQSDGESLKDCSEDQCLR
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	222	2.2.26 [Sep-21-2011]
P87172	456	Phosphatidylinositol N-ac	yes	no	0.896	0.436	0.532	4e-55
P37287	484	Phosphatidylinositol N-ac	yes	no	0.891	0.409	0.470	1e-46
Q64323	485	N-acetylglucosaminyl-phos	yes	no	0.896	0.410	0.458	1e-46
A6ZW78	452	Phosphatidylinositol N-ac	N/A	no	0.941	0.462	0.418	3e-40
P32363	452	Phosphatidylinositol N-ac	yes	no	0.869	0.426	0.436	4e-40
B5VSZ6	452	Phosphatidylinositol N-ac	N/A	no	0.869	0.426	0.436	4e-40
B3LKQ3	452	Phosphatidylinositol N-ac	N/A	no	0.869	0.426	0.436	4e-40
P42982	377	Uncharacterized glycosylt	yes	no	0.495	0.291	0.318	1e-08
Q4H4F8	389	2-deoxystreptamine N-acet	N/A	no	0.441	0.251	0.333	3e-08
P71243	406	Putative colanic acid bio	N/A	no	0.400	0.219	0.347	1e-06

>sp|P87172|GPI3_SCHPO Phosphatidylinositol N-acetylglucosaminyltransferase gpi3 subunit OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=gpi3 PE=3 SV=1

 Score =  214 bits (545), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 107/201 (53%), Positives = 137/201 (68%), Gaps = 2/201 (0%)

Query: 4   KVRFIVGGDGPKRVRLEEMREKHSLQDRVEMLGAVPHAQVRSVLISGHIFLNSSLTEAFC 63
           KVRF++ GDGPK + LE+MREK+ LQDRVEMLG+V H QVR V++ GHI+L+ SLTEAF 
Sbjct: 221 KVRFVIAGDGPKSIDLEQMREKYMLQDRVEMLGSVRHDQVRDVMVRGHIYLHPSLTEAFG 280

Query: 64  IAILEAASCGLLTVSTRVGGVPEVLPDDMVVLAEPDPGDMVLAIRKAIS--LLPKIDPQV 121
             ++EAASCGL  +ST+VGGVPEVLP  M   A P+  D+   +   I+  L  KI  + 
Sbjct: 281 TVLVEAASCGLYVISTKVGGVPEVLPSHMTRFARPEEDDLADTLSSVITDYLDHKIKTET 340

Query: 122 MHERMKKLYNWHDVAKRTEIVYDRALECPNQNLVERLSRYLSCGAWAGKLFCLVMIIDYL 181
            HE +K++Y+W DVA+RTE VYD      N  L++RL  Y  CG WAGKLFCL++ IDYL
Sbjct: 341 FHEEVKQMYSWIDVAERTEKVYDSICSENNLRLIDRLKLYYGCGQWAGKLFCLLIAIDYL 400

Query: 182 LWRFLELWKPAEDIEEVPDIV 202
           +   LE   PA DI+   D V
Sbjct: 401 VMVLLEWIWPASDIDPAVDRV 421

Catalytic subunit in the complex catalyzing the transfer of N-acetylglucosamine from UDP-N-acetylglucosamine to phosphatidylinositol, the first step of GPI biosynthesis.
Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812)
EC: 2EC: .EC: 4EC: .EC: 1EC: .EC: 1EC: 9EC: 8

>sp|P37287|PIGA_HUMAN Phosphatidylinositol N-acetylglucosaminyltransferase subunit A OS=Homo sapiens GN=PIGA PE=1 SV=1

 Score =  186 bits (471), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 97/206 (47%), Positives = 133/206 (64%), Gaps = 8/206 (3%)

Query: 5   VRFIVGGDGPKRVRLEEMREKHSLQDRVEMLGAVPHAQVRSVLISGHIFLNSSLTEAFCI 64
           + FI+GG+GPKR+ LEE+RE++ L DRV +LGA+ H  VR+VL+ GHIFLN+SLTEAFC+
Sbjct: 257 LNFIIGGEGPKRIILEEVRERYQLHDRVRLLGALEHKDVRNVLVQGHIFLNTSLTEAFCM 316

Query: 65  AILEAASCGLLTVSTRVGGVPEVLPDDMVVLAEPDPGDMVLAIRKAI-----SLLPKIDP 119
           AI+EAASCGL  VSTRVGG+PEVLP+++++L EP    +   + KAI       LP   P
Sbjct: 317 AIVEAASCGLQVVSTRVGGIPEVLPENLIILCEPSVKSLCEGLEKAIFQLKSGTLPA--P 374

Query: 120 QVMHERMKKLYNWHDVAKRTEIVYDRALECPNQNLVERLSRYLS-CGAWAGKLFCLVMII 178
           + +H  +K  Y W +VA+RTE VYDR        + +RL R +S CG   G +F L+ + 
Sbjct: 375 ENIHNIVKTFYTWRNVAERTEKVYDRVSVEAVLPMDKRLDRLISHCGPVTGYIFALLAVF 434

Query: 179 DYLLWRFLELWKPAEDIEEVPDIVLP 204
           ++L   FL    P   I+   D   P
Sbjct: 435 NFLFLIFLRWMTPDSIIDVAIDATGP 460

Necessary for the synthesis of N-acetylglucosaminyl-phosphatidylinositol, the very early intermediate in GPI-anchor biosynthesis.

Homo sapiens (taxid: 9606)

EC: 2

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: 1

EC: 9

EC: 8

>sp|Q64323|PIGA_MOUSE N-acetylglucosaminyl-phosphatidylinositol biosynthetic protein OS=Mus musculus GN=Piga PE=2 SV=1

 Score =  186 bits (471), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 95/207 (45%), Positives = 136/207 (65%), Gaps = 8/207 (3%)

Query: 4   KVRFIVGGDGPKRVRLEEMREKHSLQDRVEMLGAVPHAQVRSVLISGHIFLNSSLTEAFC 63
           ++ F++GG+GPKR+ LEE+RE++ L DRV++LGA+ H  VR+VL+ GHIFLN+SLTEAFC
Sbjct: 257 ELHFLIGGEGPKRIILEEVRERYQLHDRVQLLGALEHKDVRNVLVQGHIFLNTSLTEAFC 316

Query: 64  IAILEAASCGLLTVSTRVGGVPEVLPDDMVVLAEPDPGDMVLAIRKAI-----SLLPKID 118
           +AI+EAASCGL  VST+VGG+PEVLP+ +++L EP    +   + KAI       LP   
Sbjct: 317 MAIVEAASCGLQVVSTKVGGIPEVLPESLIILCEPSVKSLCDGLEKAIFQVKSGTLPA-- 374

Query: 119 PQVMHERMKKLYNWHDVAKRTEIVYDRALECPNQNLVERLSRYLS-CGAWAGKLFCLVMI 177
           P+ +H  +K  Y W +VA+RTE VY+R  +     + +RL R +S CG   G +F L+ +
Sbjct: 375 PENIHNVVKTFYTWRNVAERTEKVYERVSKETVLPMHKRLDRLISHCGPVTGYMFALLAV 434

Query: 178 IDYLLWRFLELWKPAEDIEEVPDIVLP 204
           + YL   FL+   P   I+   D   P
Sbjct: 435 LSYLFLIFLQWMTPDSFIDVAIDATGP 461

Necessary for the synthesis of N-acetylglucosaminyl-phosphatidylinositol, the very early intermediate in GPI-anchor biosynthesis.

Mus musculus (taxid: 10090)

>sp|A6ZW78|GPI3_YEAS7 Phosphatidylinositol N-acetylglucosaminyltransferase GPI3 subunit OS=Saccharomyces cerevisiae (strain YJM789) GN=SPT14 PE=3 SV=1

 Score =  165 bits (417), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 93/222 (41%), Positives = 133/222 (59%), Gaps = 13/222 (5%)

Query: 5   VRFIVGGDGPKRVRLEEMREKHSLQDRVEMLGAVPHAQVRSVLISGHIFLNSSLTEAFCI 64
           V FIV GDGPK +  ++M E H LQ RV++LG+VPH +VR VL  G I+L++SLTEAF  
Sbjct: 234 VEFIVAGDGPKFIDFQQMIESHRLQKRVQLLGSVPHEKVRDVLCQGDIYLHASLTEAFGT 293

Query: 65  AILEAASCGLLTVSTRVGGVPEVLPDDMVVLAEPDP-GDMVLAIRKAISLL--PKIDPQV 121
            ++EAASC LL V+T+VGG+PEVLP++M V AE     D+V A  KAI+++    +D   
Sbjct: 294 ILVEAASCNLLIVTTQVGGIPEVLPNEMTVYAEQTSVSDLVQATNKAINIIRSKALDTSS 353

Query: 122 MHERMKKLYNWHDVAKRTEIVYDRALECPNQN------LVERLSRYLSCGAWAGKLFCLV 175
            H+ + K+Y+W DVAKRT  +Y       + +      +V  L  Y   G WA  L+ L 
Sbjct: 354 FHDSVSKMYDWMDVAKRTVEIYTNISSTSSADDKDWMKMVANL--YKRDGIWAKHLYLLC 411

Query: 176 MIIDYLLWRFLELWKPAEDIEEVPDIVLPCQSDGESLKDCSE 217
            I++Y+L+  LE   P ++I+  P    P +S     K+  E
Sbjct: 412 GIVEYMLFFLLEWLYPRDEIDLAPK--WPKKSVSNETKEARE 451

Catalytic subunit in the complex catalyzing the transfer of N-acetylglucosamine from UDP-N-acetylglucosamine to phosphatidylinositol, the first step of GPI biosynthesis.

Saccharomyces cerevisiae (strain YJM789) (taxid: 307796)

EC: 2

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: 1

EC: 9

EC: 8

>sp|P32363|GPI3_YEAST Phosphatidylinositol N-acetylglucosaminyltransferase GPI3 subunit OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=SPT14 PE=1 SV=4

 Score =  164 bits (416), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 89/204 (43%), Positives = 127/204 (62%), Gaps = 11/204 (5%)

Query: 5   VRFIVGGDGPKRVRLEEMREKHSLQDRVEMLGAVPHAQVRSVLISGHIFLNSSLTEAFCI 64
           V FIV GDGPK +  ++M E H LQ RV++LG+VPH +VR VL  G I+L++SLTEAF  
Sbjct: 234 VEFIVAGDGPKFIDFQQMIESHRLQKRVQLLGSVPHEKVRDVLCQGDIYLHASLTEAFGT 293

Query: 65  AILEAASCGLLTVSTRVGGVPEVLPDDMVVLAEPDP-GDMVLAIRKAISLL--PKIDPQV 121
            ++EAASC LL V+T+VGG+PEVLP++M V AE     D+V A  KAI+++    +D   
Sbjct: 294 ILVEAASCNLLIVTTQVGGIPEVLPNEMTVYAEQTSVSDLVQATNKAINIIRSKALDTSS 353

Query: 122 MHERMKKLYNWHDVAKRTEIVYDRALECPNQN------LVERLSRYLSCGAWAGKLFCLV 175
            H+ + K+Y+W DVAKRT  +Y       + +      +V  L  Y   G WA  L+ L 
Sbjct: 354 FHDSVSKMYDWMDVAKRTVEIYTNISSTSSADDKDWMKMVANL--YKRDGIWAKHLYLLC 411

Query: 176 MIIDYLLWRFLELWKPAEDIEEVP 199
            I++Y+L+  LE   P ++I+  P
Sbjct: 412 GIVEYMLFFLLEWLYPRDEIDLAP 435

Catalytic subunit in the complex catalyzing the transfer of N-acetylglucosamine from UDP-N-acetylglucosamine to phosphatidylinositol, the first step of GPI biosynthesis.

Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292)

EC: 2

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: 1

EC: 9

EC: 8

>sp|B5VSZ6|GPI3_YEAS6 Phosphatidylinositol N-acetylglucosaminyltransferase GPI3 subunit OS=Saccharomyces cerevisiae (strain AWRI1631) GN=SPT14 PE=3 SV=2

 Score =  164 bits (416), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 89/204 (43%), Positives = 127/204 (62%), Gaps = 11/204 (5%)

Query: 5   VRFIVGGDGPKRVRLEEMREKHSLQDRVEMLGAVPHAQVRSVLISGHIFLNSSLTEAFCI 64
           V FIV GDGPK +  ++M E H LQ RV++LG+VPH +VR VL  G I+L++SLTEAF  
Sbjct: 234 VEFIVAGDGPKFIDFQQMIESHRLQKRVQLLGSVPHEKVRDVLCQGDIYLHASLTEAFGT 293

Query: 65  AILEAASCGLLTVSTRVGGVPEVLPDDMVVLAEPDP-GDMVLAIRKAISLL--PKIDPQV 121
            ++EAASC LL V+T+VGG+PEVLP++M V AE     D+V A  KAI+++    +D   
Sbjct: 294 ILVEAASCNLLIVTTQVGGIPEVLPNEMTVYAEQTSVSDLVQATNKAINIIRSKALDTSS 353

Query: 122 MHERMKKLYNWHDVAKRTEIVYDRALECPNQN------LVERLSRYLSCGAWAGKLFCLV 175
            H+ + K+Y+W DVAKRT  +Y       + +      +V  L  Y   G WA  L+ L 
Sbjct: 354 FHDSVSKMYDWMDVAKRTVEIYTNISSTSSADDKDWMKMVANL--YKRDGIWAKHLYLLC 411

Query: 176 MIIDYLLWRFLELWKPAEDIEEVP 199
            I++Y+L+  LE   P ++I+  P
Sbjct: 412 GIVEYMLFFLLEWLYPRDEIDLAP 435

Catalytic subunit in the complex catalyzing the transfer of N-acetylglucosamine from UDP-N-acetylglucosamine to phosphatidylinositol, the first step of GPI biosynthesis.

Saccharomyces cerevisiae (strain AWRI1631) (taxid: 545124)

EC: 2

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: 1

EC: 9

EC: 8

>sp|B3LKQ3|GPI3_YEAS1 Phosphatidylinositol N-acetylglucosaminyltransferase GPI3 subunit OS=Saccharomyces cerevisiae (strain RM11-1a) GN=SPT14 PE=3 SV=1

 Score =  164 bits (416), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 89/204 (43%), Positives = 127/204 (62%), Gaps = 11/204 (5%)

Query: 5   VRFIVGGDGPKRVRLEEMREKHSLQDRVEMLGAVPHAQVRSVLISGHIFLNSSLTEAFCI 64
           V FIV GDGPK +  ++M E H LQ RV++LG+VPH +VR VL  G I+L++SLTEAF  
Sbjct: 234 VEFIVAGDGPKFIDFQQMIESHRLQKRVQLLGSVPHEKVRDVLCQGDIYLHASLTEAFGT 293

Query: 65  AILEAASCGLLTVSTRVGGVPEVLPDDMVVLAEPDP-GDMVLAIRKAISLL--PKIDPQV 121
            ++EAASC LL V+T+VGG+PEVLP++M V AE     D+V A  KAI+++    +D   
Sbjct: 294 ILVEAASCNLLIVTTQVGGIPEVLPNEMTVYAEQTSVSDLVQATNKAINIIRSKALDTSS 353

Query: 122 MHERMKKLYNWHDVAKRTEIVYDRALECPNQN------LVERLSRYLSCGAWAGKLFCLV 175
            H+ + K+Y+W DVAKRT  +Y       + +      +V  L  Y   G WA  L+ L 
Sbjct: 354 FHDSVSKMYDWMDVAKRTVEIYTNISSTSSADDKDWMKMVANL--YKRDGIWAKHLYLLC 411

Query: 176 MIIDYLLWRFLELWKPAEDIEEVP 199
            I++Y+L+  LE   P ++I+  P
Sbjct: 412 GIVEYMLFFLLEWLYPRDEIDLAP 435

Catalytic subunit in the complex catalyzing the transfer of N-acetylglucosamine from UDP-N-acetylglucosamine to phosphatidylinositol, the first step of GPI biosynthesis.

Saccharomyces cerevisiae (strain RM11-1a) (taxid: 285006)

EC: 2

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: 1

EC: 9

EC: 8

>sp|P42982|YPJH_BACSU Uncharacterized glycosyltransferase YpjH OS=Bacillus subtilis (strain 168) GN=ypjH PE=3 SV=2

 Score = 59.7 bits (143), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 36/113 (31%), Positives = 65/113 (57%), Gaps = 3/113 (2%)

Query: 2   RVKVRFIVGGDGPKRVRLEEMREKHSLQDRVEMLGAVPHAQVRSVLISGHIFLNSSLTEA 61
           + K + ++ GDGP++    E+  K+ L+D+V MLG     +V  +     + L  S  E+
Sbjct: 227 KTKAKLLLVGDGPEKSTACELIRKYGLEDQVLMLG--NQDRVEDLYSISDLKLLLSEKES 284

Query: 62  FCIAILEAASCGLLTVSTRVGGVPEVLPDDMVVLAEPDPGDMVLAIRKAISLL 114
           F + +LEA +CG+  + T +GG+PEV+ +++      D GD+  A  +A+S+L
Sbjct: 285 FGLVLLEAMACGVPCIGTNIGGIPEVIKNNVSGFL-VDVGDVTAATARAMSIL 336

Bacillus subtilis (strain 168) (taxid: 224308)

EC: 2

EC: .

EC: 4

EC: .

EC: -

EC: .

EC: -

>sp|Q4H4F8|BTRM_BACCI 2-deoxystreptamine N-acetyl-D-glucosaminyltransferase OS=Bacillus circulans GN=btrM PE=3 SV=1

 Score = 58.5 bits (140), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 33/99 (33%), Positives = 54/99 (54%), Gaps = 1/99 (1%)

Query: 5   VRFIVGGDGPKRVRLEEMREKHSLQDRVEMLGAVPHAQVRSVLISGHIFLNSSLTEAFCI 64
           ++FIV GDGP+R  +EE  +  +LQ++  + G + H  V   L    +FL  S  E F  
Sbjct: 237 LQFIVCGDGPQREAMEEQIKAANLQNQFRITGFISHKFVSCYLHHAQLFLLPSHHEEFGG 296

Query: 65  AILEAASCGLLTVSTRVGGVPEVLPDDMVVLAEPDPGDM 103
           +++EAA  G+  +ST  GG  ++       + + DPGD+
Sbjct: 297 SLIEAAIAGVPIISTNNGGPADIFTHGETAILK-DPGDV 334

Glycosyltransferase involved in the biosynthesis of butirosin by mediating conversion of 2-deoxystreptamine (2-DOS) to 2'-N-acetylparomamine using UDP-alpha-D-glucosamine as sugar donor.

Bacillus circulans (taxid: 1397)

EC: 2

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: 2

EC: 8

EC: 3

>sp|P71243|WCAL_ECOLI Putative colanic acid biosynthesis glycosyltransferase WcaL OS=Escherichia coli (strain K12) GN=wcaL PE=3 SV=2

 Score = 53.5 bits (127), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 33/95 (34%), Positives = 53/95 (55%), Gaps = 6/95 (6%)

Query: 3   VKVRFIVGGDGPKRVRLEEMREKHSLQDRVEMLGAVPHAQVRSVLISGHIFLNSSLT--- 59
           V  R+ + G GP   RL  + E++ L+D VEM G  P  +V+++L    +FL  S+T   
Sbjct: 252 VAFRYRILGIGPWERRLRTLIEQYQLEDVVEMPGFKPSHEVKAMLDDADVFLLPSVTGAD 311

Query: 60  ---EAFCIAILEAASCGLLTVSTRVGGVPEVLPDD 91
              E   +A++EA + G+  VST   G+PE++  D
Sbjct: 312 GDMEGIPVALMEAMAVGIPVVSTLHSGIPELVEAD 346

Escherichia coli (strain K12) (taxid: 83333)

EC: 2

EC: .

EC: 4

EC: .

EC: -

EC: .

EC: -

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	222
255577116	449	glycosyltransferase, putative [Ricinus c	0.936	0.463	0.850	1e-100
449462593	447	PREDICTED: phosphatidylinositol N-acetyl	0.990	0.492	0.790	1e-98
449502225	445	PREDICTED: phosphatidylinositol N-acetyl	0.990	0.494	0.790	2e-98
242048156	448	hypothetical protein SORBIDRAFT_02g00880	0.968	0.479	0.805	1e-95
356546247	444	PREDICTED: phosphatidylinositol N-acetyl	0.945	0.472	0.8	2e-95
356575054	446	PREDICTED: phosphatidylinositol N-acetyl	0.959	0.477	0.835	2e-95
326503280	448	predicted protein [Hordeum vulgare subsp	0.968	0.479	0.805	2e-95
225434648	447	PREDICTED: phosphatidylinositol N-acetyl	0.959	0.476	0.854	1e-94
215769000	471	unnamed protein product [Oryza sativa Ja	0.968	0.456	0.810	3e-94
293332789	386	hypothetical protein [Zea mays] gi|22402	0.891	0.512	0.848	5e-94

>gi|255577116|ref|XP_002529442.1| glycosyltransferase, putative [Ricinus communis] gi|223531119|gb|EEF32968.1| glycosyltransferase, putative [Ricinus communis]

 Score =  368 bits (945), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 177/208 (85%), Positives = 188/208 (90%)

Query: 4   KVRFIVGGDGPKRVRLEEMREKHSLQDRVEMLGAVPHAQVRSVLISGHIFLNSSLTEAFC 63
            V FIVGGDGPKRVRLEEMREKHSLQDRVEMLGAVPH+ VR VLI GHIFLNSSLTEAFC
Sbjct: 230 NVHFIVGGDGPKRVRLEEMREKHSLQDRVEMLGAVPHSCVRCVLIRGHIFLNSSLTEAFC 289

Query: 64  IAILEAASCGLLTVSTRVGGVPEVLPDDMVVLAEPDPGDMVLAIRKAISLLPKIDPQVMH 123
           IAILEAASCGLLTVSTRVGGVPEVLPDDM+VLAEPDP DMV AI KAI LLPKIDP+VMH
Sbjct: 290 IAILEAASCGLLTVSTRVGGVPEVLPDDMIVLAEPDPSDMVQAINKAICLLPKIDPKVMH 349

Query: 124 ERMKKLYNWHDVAKRTEIVYDRALECPNQNLVERLSRYLSCGAWAGKLFCLVMIIDYLLW 183
           +RMKKLYNWHDVAKRTEIVYDRAL+CPNQN +ERLSRYLSCGAWAGKLFCLVMIID LL 
Sbjct: 350 DRMKKLYNWHDVAKRTEIVYDRALKCPNQNFLERLSRYLSCGAWAGKLFCLVMIIDSLLL 409

Query: 184 RFLELWKPAEDIEEVPDIVLPCQSDGES 211
           R ++LW+PAEDIEEVP+  +P   D E 
Sbjct: 410 RLVQLWQPAEDIEEVPEFTIPNHQDREG 437

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449462593|ref|XP_004149025.1| PREDICTED: phosphatidylinositol N-acetylglucosaminyltransferase subunit A-like [Cucumis sativus]

 Score =  364 bits (934), Expect = 1e-98,   Method: Compositional matrix adjust.
 Identities = 174/220 (79%), Positives = 191/220 (86%)

Query: 1   MRVKVRFIVGGDGPKRVRLEEMREKHSLQDRVEMLGAVPHAQVRSVLISGHIFLNSSLTE 60
           M   VRFI+GGDGPKRVRLEEMREKH LQDRVEMLGAVPHA VRSVLISGHIFLNSSLTE
Sbjct: 228 MFPNVRFIIGGDGPKRVRLEEMREKHGLQDRVEMLGAVPHALVRSVLISGHIFLNSSLTE 287

Query: 61  AFCIAILEAASCGLLTVSTRVGGVPEVLPDDMVVLAEPDPGDMVLAIRKAISLLPKIDPQ 120
           AFCIAILEAASCGLLTVSTRVGGVPEVLPDDMVVLAEPDPGDMV AI+KAI++LP IDPQ
Sbjct: 288 AFCIAILEAASCGLLTVSTRVGGVPEVLPDDMVVLAEPDPGDMVQAIKKAITMLPTIDPQ 347

Query: 121 VMHERMKKLYNWHDVAKRTEIVYDRALECPNQNLVERLSRYLSCGAWAGKLFCLVMIIDY 180
            MH RMKKLY+WHDVAKRT IVYD AL   +QNL+ERLSRYLSCG+WAGKLFCLVM+ID+
Sbjct: 348 EMHNRMKKLYDWHDVAKRTAIVYDHALSSSDQNLIERLSRYLSCGSWAGKLFCLVMLIDF 407

Query: 181 LLWRFLELWKPAEDIEEVPDIVLPCQSDGESLKDCSEDQC 220
           LLW FL+LW+P E+IE VPD  L C  D   + D  +++ 
Sbjct: 408 LLWYFLKLWQPDENIEVVPDFKLTCNQDQGPMLDNHDEKT 447

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449502225|ref|XP_004161580.1| PREDICTED: phosphatidylinositol N-acetylglucosaminyltransferase subunit A-like [Cucumis sativus]

 Score =  364 bits (934), Expect = 2e-98,   Method: Compositional matrix adjust.
 Identities = 174/220 (79%), Positives = 191/220 (86%)

Query: 1   MRVKVRFIVGGDGPKRVRLEEMREKHSLQDRVEMLGAVPHAQVRSVLISGHIFLNSSLTE 60
           M   VRFI+GGDGPKRVRLEEMREKH LQDRVEMLGAVPHA VRSVLISGHIFLNSSLTE
Sbjct: 226 MFPNVRFIIGGDGPKRVRLEEMREKHGLQDRVEMLGAVPHALVRSVLISGHIFLNSSLTE 285

Query: 61  AFCIAILEAASCGLLTVSTRVGGVPEVLPDDMVVLAEPDPGDMVLAIRKAISLLPKIDPQ 120
           AFCIAILEAASCGLLTVSTRVGGVPEVLPDDMVVLAEPDPGDMV AI+KAI++LP IDPQ
Sbjct: 286 AFCIAILEAASCGLLTVSTRVGGVPEVLPDDMVVLAEPDPGDMVQAIKKAITMLPTIDPQ 345

Query: 121 VMHERMKKLYNWHDVAKRTEIVYDRALECPNQNLVERLSRYLSCGAWAGKLFCLVMIIDY 180
            MH RMKKLY+WHDVAKRT IVYD AL   +QNL+ERLSRYLSCG+WAGKLFCLVM+ID+
Sbjct: 346 EMHNRMKKLYDWHDVAKRTAIVYDHALSSSDQNLIERLSRYLSCGSWAGKLFCLVMLIDF 405

Query: 181 LLWRFLELWKPAEDIEEVPDIVLPCQSDGESLKDCSEDQC 220
           LLW FL+LW+P E+IE VPD  L C  D   + D  +++ 
Sbjct: 406 LLWYFLKLWQPDENIEVVPDFKLTCNQDQGPMLDNHDEKT 445

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|242048156|ref|XP_002461824.1| hypothetical protein SORBIDRAFT_02g008800 [Sorghum bicolor] gi|241925201|gb|EER98345.1| hypothetical protein SORBIDRAFT_02g008800 [Sorghum bicolor]

 Score =  354 bits (909), Expect = 1e-95,   Method: Compositional matrix adjust.
 Identities = 174/216 (80%), Positives = 189/216 (87%), Gaps = 1/216 (0%)

Query: 4   KVRFIVGGDGPKRVRLEEMREKHSLQDRVEMLGAVPHAQVRSVLISGHIFLNSSLTEAFC 63
           KVRFIVGGDGPKRVRLEEMREK SLQDRVEMLGAVPHAQVRSVLISGHIFLNSSLTEAFC
Sbjct: 232 KVRFIVGGDGPKRVRLEEMREKFSLQDRVEMLGAVPHAQVRSVLISGHIFLNSSLTEAFC 291

Query: 64  IAILEAASCGLLTVSTRVGGVPEVLPDDMVVLAEPDPGDMVLAIRKAISLLPKIDPQVMH 123
           IAILEAASCGLLTVSTRVGGVPEVLPDDM+VLAEP PGDMV A++KAI +LP IDPQ+MH
Sbjct: 292 IAILEAASCGLLTVSTRVGGVPEVLPDDMIVLAEPAPGDMVRAVKKAIDMLPGIDPQIMH 351

Query: 124 ERMKKLYNWHDVAKRTEIVYDRALECPNQNLVERLSRYLSCGAWAGKLFCLVMIIDYLLW 183
            RMKKLY+W DVAKRTEIVYDRA++ P  NL++RL RYL+CG+WAGKLFCLVMII+YLLW
Sbjct: 352 LRMKKLYSWDDVAKRTEIVYDRAMQFPTTNLLDRLPRYLTCGSWAGKLFCLVMIINYLLW 411

Query: 184 RFLELWKPAEDIEEVPDIVLPCQSDGESLKDCSEDQ 219
           R LE  +PAE IEEVPDI  P  +   S  D  E Q
Sbjct: 412 RLLEFLQPAEGIEEVPDIG-PLHAHLGSKNDFCEAQ 446

Source: Sorghum bicolor

Species: Sorghum bicolor

Genus: Sorghum

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356546247|ref|XP_003541541.1| PREDICTED: phosphatidylinositol N-acetylglucosaminyltransferase subunit A-like [Glycine max]

 Score =  354 bits (908), Expect = 2e-95,   Method: Compositional matrix adjust.
 Identities = 168/210 (80%), Positives = 188/210 (89%)

Query: 4   KVRFIVGGDGPKRVRLEEMREKHSLQDRVEMLGAVPHAQVRSVLISGHIFLNSSLTEAFC 63
            VRFI+GGDGPKRVRLEEMREKHSL DRVE+LGAVPHAQVRSVLISGHIFL  SLTEAFC
Sbjct: 233 NVRFIIGGDGPKRVRLEEMREKHSLFDRVELLGAVPHAQVRSVLISGHIFLTCSLTEAFC 292

Query: 64  IAILEAASCGLLTVSTRVGGVPEVLPDDMVVLAEPDPGDMVLAIRKAISLLPKIDPQVMH 123
           +AILEAASCGLLTVSTRVGGVPEVLPDDM+VLAEPDPGD+V AI+KAI +LP+IDPQVMH
Sbjct: 293 MAILEAASCGLLTVSTRVGGVPEVLPDDMIVLAEPDPGDIVQAIQKAIYMLPEIDPQVMH 352

Query: 124 ERMKKLYNWHDVAKRTEIVYDRALECPNQNLVERLSRYLSCGAWAGKLFCLVMIIDYLLW 183
            RM++LYNW DVAKRTEIVYDRA +CPNQ+L+E LSRYLSCGAWAGKLF LVMI+ +L W
Sbjct: 353 NRMRELYNWRDVAKRTEIVYDRASKCPNQSLLESLSRYLSCGAWAGKLFSLVMILGFLFW 412

Query: 184 RFLELWKPAEDIEEVPDIVLPCQSDGESLK 213
             LELW+PA+DIEEVPD++     D E L+
Sbjct: 413 HLLELWQPADDIEEVPDVIFSHNCDEEMLQ 442

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356575054|ref|XP_003555657.1| PREDICTED: phosphatidylinositol N-acetylglucosaminyltransferase subunit A-like [Glycine max]

 Score =  354 bits (908), Expect = 2e-95,   Method: Compositional matrix adjust.
 Identities = 178/213 (83%), Positives = 193/213 (90%)

Query: 4   KVRFIVGGDGPKRVRLEEMREKHSLQDRVEMLGAVPHAQVRSVLISGHIFLNSSLTEAFC 63
            VRFI+GGDGPKRVRLEEMREKHSLQDRVEMLGAV H QVRSVLISGHIFLNSSLTEAFC
Sbjct: 232 NVRFIIGGDGPKRVRLEEMREKHSLQDRVEMLGAVQHVQVRSVLISGHIFLNSSLTEAFC 291

Query: 64  IAILEAASCGLLTVSTRVGGVPEVLPDDMVVLAEPDPGDMVLAIRKAISLLPKIDPQVMH 123
           IAILEAASCGLLTVSTRVGGVPEVLPD+M+VLAEPDPGDMV AI+KAIS+LPKIDPQ MH
Sbjct: 292 IAILEAASCGLLTVSTRVGGVPEVLPDEMIVLAEPDPGDMVHAIQKAISMLPKIDPQAMH 351

Query: 124 ERMKKLYNWHDVAKRTEIVYDRALECPNQNLVERLSRYLSCGAWAGKLFCLVMIIDYLLW 183
            RM++LYNWHDVAKRTEIVYDRA +C NQNL+ERLSRYL CGAWAGKLF LVMI+ +LLW
Sbjct: 352 NRMRELYNWHDVAKRTEIVYDRAFKCSNQNLLERLSRYLFCGAWAGKLFFLVMIVGFLLW 411

Query: 184 RFLELWKPAEDIEEVPDIVLPCQSDGESLKDCS 216
           + LELW+PA+DIEEVPD  LPC  D E L+  S
Sbjct: 412 QLLELWQPADDIEEVPDFTLPCSCDEEMLEKNS 444

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|326503280|dbj|BAJ99265.1| predicted protein [Hordeum vulgare subsp. vulgare]

 Score =  353 bits (907), Expect = 2e-95,   Method: Compositional matrix adjust.
 Identities = 174/216 (80%), Positives = 189/216 (87%), Gaps = 1/216 (0%)

Query: 4   KVRFIVGGDGPKRVRLEEMREKHSLQDRVEMLGAVPHAQVRSVLISGHIFLNSSLTEAFC 63
           KVRFIVGGDGPKRVRLEEMREK SLQDRVEMLGAVPHAQVRSVLISGHIFLNSSLTEAFC
Sbjct: 232 KVRFIVGGDGPKRVRLEEMREKFSLQDRVEMLGAVPHAQVRSVLISGHIFLNSSLTEAFC 291

Query: 64  IAILEAASCGLLTVSTRVGGVPEVLPDDMVVLAEPDPGDMVLAIRKAISLLPKIDPQVMH 123
           IAILEAASCGLLTVSTRVGGVPEVLPDDM+VLAEPDP DMV A+R+AI +LP IDPQ+MH
Sbjct: 292 IAILEAASCGLLTVSTRVGGVPEVLPDDMIVLAEPDPEDMVRAVRQAIDILPGIDPQIMH 351

Query: 124 ERMKKLYNWHDVAKRTEIVYDRALECPNQNLVERLSRYLSCGAWAGKLFCLVMIIDYLLW 183
            RMKKLY+W DVAKRTEIVYDRA++  N NL+ RL RYL+CGAWAGKLFCLVMII+YL+W
Sbjct: 352 RRMKKLYSWDDVAKRTEIVYDRAMQSSNTNLLNRLPRYLTCGAWAGKLFCLVMIINYLVW 411

Query: 184 RFLELWKPAEDIEEVPDIVLPCQSDGESLKDCSEDQ 219
            FLE  +PAE IEEVPDI  P     +S+ D  E Q
Sbjct: 412 CFLEFLQPAEGIEEVPDIG-PLHIHSDSVDDQCEAQ 446

Source: Hordeum vulgare subsp. vulgare

Species: Hordeum vulgare

Genus: Hordeum

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225434648|ref|XP_002279568.1| PREDICTED: phosphatidylinositol N-acetylglucosaminyltransferase subunit A [Vitis vinifera] gi|297745930|emb|CBI15986.3| unnamed protein product [Vitis vinifera]

 Score =  351 bits (900), Expect = 1e-94,   Method: Compositional matrix adjust.
 Identities = 182/213 (85%), Positives = 192/213 (90%)

Query: 4   KVRFIVGGDGPKRVRLEEMREKHSLQDRVEMLGAVPHAQVRSVLISGHIFLNSSLTEAFC 63
            VRFIVGGDGPKRVRLEEMREK+SLQDRVEMLGAVPHA+VRSVLISGHIFLNSSLTEAFC
Sbjct: 231 NVRFIVGGDGPKRVRLEEMREKNSLQDRVEMLGAVPHARVRSVLISGHIFLNSSLTEAFC 290

Query: 64  IAILEAASCGLLTVSTRVGGVPEVLPDDMVVLAEPDPGDMVLAIRKAISLLPKIDPQVMH 123
           IAILEAASCGLLTVSTRVGGVPEVLPDDM+VLAEPDP DMV AI KAIS+LPKIDPQVMH
Sbjct: 291 IAILEAASCGLLTVSTRVGGVPEVLPDDMIVLAEPDPSDMVRAITKAISILPKIDPQVMH 350

Query: 124 ERMKKLYNWHDVAKRTEIVYDRALECPNQNLVERLSRYLSCGAWAGKLFCLVMIIDYLLW 183
            RMKKLYNWHDVAKRTEIVYDRAL C NQNLV+RLSRYL CG WAGKLFCLVMIID+LLW
Sbjct: 351 LRMKKLYNWHDVAKRTEIVYDRALGCSNQNLVDRLSRYLPCGGWAGKLFCLVMIIDFLLW 410

Query: 184 RFLELWKPAEDIEEVPDIVLPCQSDGESLKDCS 216
           R L+LW+P E+IEEVPD  LP     E  +D S
Sbjct: 411 RLLQLWQPPEEIEEVPDFSLPNSECPEFKEDGS 443

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|215769000|dbj|BAH01229.1| unnamed protein product [Oryza sativa Japonica Group] gi|218199415|gb|EEC81842.1| hypothetical protein OsI_25603 [Oryza sativa Indica Group] gi|222636809|gb|EEE66941.1| hypothetical protein OsJ_23803 [Oryza sativa Japonica Group]

 Score =  350 bits (897), Expect = 3e-94,   Method: Compositional matrix adjust.
 Identities = 175/216 (81%), Positives = 187/216 (86%), Gaps = 1/216 (0%)

Query: 4   KVRFIVGGDGPKRVRLEEMREKHSLQDRVEMLGAVPHAQVRSVLISGHIFLNSSLTEAFC 63
           KVRFIVGGDGPKRVR+EEMREK SLQDRVEMLGAVPHAQVRSVLISGHIFLNSSLTEAFC
Sbjct: 253 KVRFIVGGDGPKRVRIEEMREKFSLQDRVEMLGAVPHAQVRSVLISGHIFLNSSLTEAFC 312

Query: 64  IAILEAASCGLLTVSTRVGGVPEVLPDDMVVLAEPDPGDMVLAIRKAISLLPKIDPQVMH 123
           IAILEAASCGLLTVSTRVGGVPEVLPDDMVVLAEP P DMV A+RKAI +LP IDPQVMH
Sbjct: 313 IAILEAASCGLLTVSTRVGGVPEVLPDDMVVLAEPAPEDMVRAVRKAIDMLPGIDPQVMH 372

Query: 124 ERMKKLYNWHDVAKRTEIVYDRALECPNQNLVERLSRYLSCGAWAGKLFCLVMIIDYLLW 183
            RMKKLY+W DVAKRTEIVYDRA++ P  +L+ERL RYL CGAWAGKLFCLVMII+YLLW
Sbjct: 373 LRMKKLYSWDDVAKRTEIVYDRAMQSPQTDLLERLPRYLRCGAWAGKLFCLVMIINYLLW 432

Query: 184 RFLELWKPAEDIEEVPDIVLPCQSDGESLKDCSEDQ 219
             LE  +P E IEEVPDI  P  +  ES+ D  E Q
Sbjct: 433 CLLEYLQPTEGIEEVPDI-RPVHARLESVDDTCETQ 467

Source: Oryza sativa Japonica Group

Species: Oryza sativa

Genus: Oryza

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|293332789|ref|NP_001169463.1| hypothetical protein [Zea mays] gi|224029517|gb|ACN33834.1| unknown [Zea mays] gi|414589229|tpg|DAA39800.1| TPA: hypothetical protein ZEAMMB73_364962 [Zea mays]

 Score =  349 bits (895), Expect = 5e-94,   Method: Compositional matrix adjust.
 Identities = 168/198 (84%), Positives = 182/198 (91%)

Query: 4   KVRFIVGGDGPKRVRLEEMREKHSLQDRVEMLGAVPHAQVRSVLISGHIFLNSSLTEAFC 63
           KVRFIVGGDGPKRVRLEEMREK SLQDRVEMLGAVPHAQVRSVLISGHIFLNSSLTEAFC
Sbjct: 172 KVRFIVGGDGPKRVRLEEMREKFSLQDRVEMLGAVPHAQVRSVLISGHIFLNSSLTEAFC 231

Query: 64  IAILEAASCGLLTVSTRVGGVPEVLPDDMVVLAEPDPGDMVLAIRKAISLLPKIDPQVMH 123
           IAILEAASCGLLTVSTRVGGVPEVLPDDM+VLAEP PGDMV A++KAI +LP IDPQ+MH
Sbjct: 232 IAILEAASCGLLTVSTRVGGVPEVLPDDMIVLAEPAPGDMVRAVKKAIDMLPGIDPQIMH 291

Query: 124 ERMKKLYNWHDVAKRTEIVYDRALECPNQNLVERLSRYLSCGAWAGKLFCLVMIIDYLLW 183
            RMK+LY+W DVAKRTEIVYDRA+E P  NL++RL RYL+CG+WAGKLFCLVMII+YLLW
Sbjct: 292 LRMKELYSWDDVAKRTEIVYDRAMESPTTNLLDRLPRYLTCGSWAGKLFCLVMIINYLLW 351

Query: 184 RFLELWKPAEDIEEVPDI 201
           R LE  +PA  IEEVPDI
Sbjct: 352 RLLEFLQPAVGIEEVPDI 369

Source: Zea mays

Species: Zea mays

Genus: Zea

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	222
TAIR|locus:2096875	447	SETH2 [Arabidopsis thaliana (t	0.941	0.467	0.8	2e-88
DICTYBASE|DDB_G0283965	523	pigA "phosphatidylinositol gly	0.869	0.369	0.582	7.5e-57
ASPGD|ASPL0000056162	488	AN0636 [Emericella nidulans (t	0.626	0.284	0.560	2.9e-52
POMBASE|SPBC3D6.07	456	gpi3 "pig-A, phosphatidylinosi	0.891	0.434	0.534	3.5e-52
UNIPROTKB|G4NH54	499	MGG_03933 "Phosphatidylinosito	0.626	0.278	0.553	6.1e-52
UNIPROTKB|F1NHQ4	477	PIGA "Uncharacterized protein"	0.873	0.406	0.482	1e-45
GENEDB_PFALCIPARUM|PF10_0316	461	PF10_0316 "phosphatidyl inosit	0.873	0.420	0.463	2.1e-45
UNIPROTKB|Q8IJ83	461	PF10_0316 "N-acetylglucosaminy	0.873	0.420	0.463	2.1e-45
CGD|CAL0005841	452	SPT14 [Candida albicans (taxid	0.887	0.435	0.46	2.7e-45
UNIPROTKB|Q5A6R7	452	SPT14 "Putative uncharacterize	0.887	0.435	0.46	2.7e-45

TAIR|locus:2096875 SETH2 [Arabidopsis thaliana (taxid:3702)]

 Score = 883 (315.9 bits), Expect = 2.0e-88, P = 2.0e-88
 Identities = 168/210 (80%), Positives = 188/210 (89%)

Query:     5 VRFIVGGDGPKRVRLEEMREKHSLQDRVEMLGAVPHAQVRSVLISGHIFLNSSLTEAFCI 64
             VRF+VGGDGPK VRLEEMREKHSLQDRVEMLGAVPH++VRSVL++GHIFLNSSLTEAFCI
Sbjct:   232 VRFVVGGDGPKHVRLEEMREKHSLQDRVEMLGAVPHSRVRSVLVTGHIFLNSSLTEAFCI 291

Query:    65 AILEAASCGLLTVSTRVGGVPEVLPDDMVVLAEPDPGDMVLAIRKAISLLPKIDPQVMHE 124
             AILEAASCGLLTVSTRVGGVPEVLPDDMVVLAEPDP DMV AI KAIS+LP I+P+ MH 
Sbjct:   292 AILEAASCGLLTVSTRVGGVPEVLPDDMVVLAEPDPDDMVRAIEKAISILPTINPEEMHN 351

Query:   125 RMKKLYNWHDVAKRTEIVYDRALECPNQNLVERLSRYLSCGAWAGKLFCLVMIIDYLLWR 184
             RMKKLY+W DVAKRTEIVYDRAL+C N++L+ERL R+LSCGAWAGKLFC+VMI+DYLLWR
Sbjct:   352 RMKKLYSWQDVAKRTEIVYDRALKCSNRSLLERLMRFLSCGAWAGKLFCMVMILDYLLWR 411

Query:   185 FLELWKPAEDIEEVPDIVLPCQSDGESLKD 214
              L+L +P EDIEE PDI L C   G  + +
Sbjct:   412 LLQLLQPDEDIEEAPDICL-CHHRGVEVSE 440

GO:0005634 "nucleus" evidence=ISM

GO:0006506 "GPI anchor biosynthetic process" evidence=IEA;ISS

GO:0009058 "biosynthetic process" evidence=IEA

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISS

DICTYBASE|DDB_G0283965 pigA "phosphatidylinositol glycan, class A" [Dictyostelium discoideum (taxid:44689)]

 Score = 585 (211.0 bits), Expect = 7.5e-57, P = 7.5e-57
 Identities = 113/194 (58%), Positives = 143/194 (73%)

Query:     7 FIVGGDGPKRVRLEEMREKHSLQDRVEMLGAVPHAQVRSVLISGHIFLNSSLTEAFCIAI 66
             F++GGDGPKRV LEEMREKH L DRVE+LG+V H+ VR+VL+ G IFLNSSLTEAFCIAI
Sbjct:   317 FVIGGDGPKRVSLEEMREKHQLHDRVELLGSVKHSNVRNVLVRGDIFLNSSLTEAFCIAI 376

Query:    67 LEAASCGLLTVSTRVGGVPEVLPDDMVVLAEPDPGDMVLAIRKAISLLPKIDPQVMHERM 126
             +EAASCGL  VST+VGGVPEVLP  M+ LA+P   D+   +  AI  L K  P   HE +
Sbjct:   377 VEAASCGLYVVSTKVGGVPEVLPPHMISLAQPKSDDLEEKLTDAIINL-KSTPLQTHEEV 435

Query:   127 KKLYNWHDVAKRTEIVYDRALECPNQNLVERLSRYLSCGAWAGKLFCLVMIIDYLLWRFL 186
             + +Y+W+DVA+RTE VYD   + P    +ERL R++ CG WAGKL C+V+ +D L++R L
Sbjct:   436 RTMYDWNDVARRTETVYDIISKAPKVPFIERLRRFVGCGLWAGKLNCMVVALDNLIYRCL 495

Query:   187 ELWKPAEDIEEVPD 200
             E + P EDI+E  D
Sbjct:   496 EYYSPKEDIDEAFD 509

GO:0009058 "biosynthetic process" evidence=IEA

GO:0006506 "GPI anchor biosynthetic process" evidence=IEA

GO:0008150 "biological_process" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0016740 "transferase activity" evidence=IEA

ASPGD|ASPL0000056162 AN0636 [Emericella nidulans (taxid:162425)]

 Score = 403 (146.9 bits), Expect = 2.9e-52, Sum P(2) = 2.9e-52
 Identities = 79/141 (56%), Positives = 104/141 (73%)

Query:     5 VRFIVGGDGPKRVRLEEMREKHSLQDRVEMLGAVPHAQVRSVLISGHIFLNSSLTEAFCI 64
             VRFI+ G GPK + LE+M E++ LQD+VEMLGA+ H +VR V++ GHI+L+ SLTEAF  
Sbjct:   249 VRFIIAGSGPKAIDLEQMLERNVLQDKVEMLGAIRHEEVRDVMVRGHIYLHPSLTEAFGT 308

Query:    65 AILEAASCGLLTVSTRVGGVPEVLPDDMVVLAEPDPGDMVLAIRKAISLLP--KIDPQVM 122
              I+EAASCGL  V TRVGG+PEVLP  M   A+P+  D+VLA  KAIS L   K+  +  
Sbjct:   309 VIVEAASCGLYVVCTRVGGIPEVLPQHMTTFAKPEEDDIVLATSKAISALRSNKVRTERF 368

Query:   123 HERMKKLYNWHDVAKRTEIVY 143
             H+++K +Y+W DVA+RTE VY
Sbjct:   369 HDQVKVMYSWTDVARRTERVY 389

GO:0008375 "acetylglucosaminyltransferase activity" evidence=IEA

GO:0005575 "cellular_component" evidence=ND

GO:0006506 "GPI anchor biosynthetic process" evidence=IEA

POMBASE|SPBC3D6.07 gpi3 "pig-A, phosphatidylinositol N-acetylglucosaminyltransferase subunit Gpi3 (predicted)" [Schizosaccharomyces pombe (taxid:4896)]

 Score = 541 (195.5 bits), Expect = 3.5e-52, P = 3.5e-52
 Identities = 108/202 (53%), Positives = 139/202 (68%)

Query:     4 KVRFIVGGDGPKRVRLEEMREKHSLQDRVEMLGAVPHAQVRSVLISGHIFLNSSLTEAFC 63
             KVRF++ GDGPK + LE+MREK+ LQDRVEMLG+V H QVR V++ GHI+L+ SLTEAF 
Sbjct:   221 KVRFVIAGDGPKSIDLEQMREKYMLQDRVEMLGSVRHDQVRDVMVRGHIYLHPSLTEAFG 280

Query:    64 IAILEAASCGLLTVSTRVGGVPEVLPDDMVVLAEPDPGDMVLAIRKAIS--LLPKIDPQV 121
               ++EAASCGL  +ST+VGGVPEVLP  M   A P+  D+   +   I+  L  KI  + 
Sbjct:   281 TVLVEAASCGLYVISTKVGGVPEVLPSHMTRFARPEEDDLADTLSSVITDYLDHKIKTET 340

Query:   122 MHERMKKLYNWHDVAKRTEIVYDRALECPNQNLVERLSRYLSCGAWAGKLFCLVMIIDYL 181
              HE +K++Y+W DVA+RTE VYD      N  L++RL  Y  CG WAGKLFCL++ IDYL
Sbjct:   341 FHEEVKQMYSWIDVAERTEKVYDSICSENNLRLIDRLKLYYGCGQWAGKLFCLLIAIDYL 400

Query:   182 LWRFLE-LWKPAEDIEEVPDIV 202
             +   LE +W PA DI+   D V
Sbjct:   401 VMVLLEWIW-PASDIDPAVDRV 421

GO:0000506 "glycosylphosphatidylinositol-N-acetylglucosaminyltransferase (GPI-GnT) complex" evidence=ISO

GO:0005783 "endoplasmic reticulum" evidence=ISO

GO:0006506 "GPI anchor biosynthetic process" evidence=ISO

GO:0008194 "UDP-glycosyltransferase activity" evidence=ISO

GO:0017176 "phosphatidylinositol N-acetylglucosaminyltransferase activity" evidence=IEA

UNIPROTKB|G4NH54 MGG_03933 "Phosphatidylinositol N-acetylglucosaminyltransferase GPI3 subunit" [Magnaporthe oryzae 70-15 (taxid:242507)]

 Score = 390 (142.3 bits), Expect = 6.1e-52, Sum P(2) = 6.1e-52
 Identities = 78/141 (55%), Positives = 102/141 (72%)

Query:     6 RFIVGGDGPKRVRLEEMREKHSLQDRVEMLGAVPHAQVRSVLISGHIFLNSSLTEAFCIA 65
             RFI+ GDGPK + LE+M E++ LQDRVEMLG V H  VR+V+I G I+L+ SLTEAF   
Sbjct:   243 RFIIAGDGPKSIDLEQMIEQNVLQDRVEMLGPVRHEDVRNVMIRGQIYLHPSLTEAFGTV 302

Query:    66 ILEAASCGLLTVSTRVGGVPEVLPDDMVVLAEPDPGDMVLAIRKAISLLP--KIDPQVMH 123
             I+EAASCGL  V T+VGG+PEVLP  M V A PD  D+V A  +AI+ L   ++  ++ H
Sbjct:   303 IVEAASCGLYVVCTQVGGIPEVLPSHMTVFARPDEDDLVAATGRAIAALRSGRVRTELFH 362

Query:   124 ERMKKLYNWHDVAKRTEIVYD 144
             E++K +Y+W +VA RTE VYD
Sbjct:   363 EQVKTMYSWKNVAMRTERVYD 383

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

UNIPROTKB|F1NHQ4 PIGA "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 480 (174.0 bits), Expect = 1.0e-45, P = 1.0e-45
 Identities = 96/199 (48%), Positives = 137/199 (68%)

Query:     4 KVRFIVGGDGPKRVRLEEMREKHSLQDRVEMLGAVPHAQVRSVLISGHIFLNSSLTEAFC 63
             ++ F+VGG+GPKR+ LEE+RE++ L DRV +LGA+ H  VR VL+ GHIFLN+SLTEAFC
Sbjct:   231 ELHFLVGGEGPKRIVLEEVRERYQLHDRVRLLGALEHQDVRDVLVQGHIFLNTSLTEAFC 290

Query:    64 IAILEAASCGLLTVSTRVGGVPEVLPDDMVVLAEPDPGDMVLAIRKAISLLP--KI-DPQ 120
             +AI+EAASCGL  VSTRVGG+PEVLP+++++L EP    +   + KAI+ L   K+  P+
Sbjct:   291 MAIVEAASCGLQVVSTRVGGIPEVLPENLIILCEPSVKSLCDGLEKAIARLRSGKLPSPE 350

Query:   121 VMHERMKKLYNWHDVAKRTEIVYDRALECPNQNLVERLSRYLS-CGAWAGKLFCLVMIID 179
              +H ++K  Y W +VA+RTE VY+R  +     + ERL R +S CG   G +F L  +++
Sbjct:   351 SIHNKVKTFYTWRNVAERTEKVYERVADEVVLPMDERLDRLMSHCGPVTGYIFALFAVLN 410

Query:   180 YLLWRFLELWKPAEDIEEV 198
             +L   FL  W   + I +V
Sbjct:   411 FLFLLFLR-WMTPDSIIDV 428

GO:0006506 "GPI anchor biosynthetic process" evidence=IEA

GO:0000506 "glycosylphosphatidylinositol-N-acetylglucosaminyltransferase (GPI-GnT) complex" evidence=IEA

GO:0005789 "endoplasmic reticulum membrane" evidence=IEA

GENEDB_PFALCIPARUM|PF10_0316 PF10_0316 "phosphatidyl inositol glycan, class A, putative" [Plasmodium falciparum (taxid:5833)]

 Score = 477 (173.0 bits), Expect = 2.1e-45, P = 2.1e-45
 Identities = 90/194 (46%), Positives = 135/194 (69%)

Query:     5 VRFIVGGDGPKRVRLEEMREKHSLQDRVEMLGAVPHAQVRSVLISGHIFLNSSLTEAFCI 64
             ++FI+GG+GPKR+ LEEMREK+ L + V +LG V    V+++L +GHIFLN+SLTEAFCI
Sbjct:   253 IKFIIGGEGPKRLLLEEMREKYHLHNSVVLLGKVKQENVKNILQTGHIFLNTSLTEAFCI 312

Query:    65 AILEAASCGLLTVSTRVGGVPEVLPDDMVVLAEPDPGDMVLAIRKAISLLPKIDPQVMHE 124
             AI+EAASCGLL +ST VGG+ EVLP DM++LA+P+  ++  A+ KA+ ++ K+D  + HE
Sbjct:   313 AIIEAASCGLLVISTDVGGISEVLPHDMMILAKPNHIELCKAVDKALKIVQKVDSNLFHE 372

Query:   125 RMKKLYNWHDVAKRTEIVYDRALECPNQNLVERLSRYLSCGAWAGKLFCLVMIIDYLLWR 184
             R+ K+Y+W  VA++TE VY   L   N +L  R+ +          ++  +++I Y+  +
Sbjct:   373 RLTKMYSWEKVAEKTEKVYMNVLNYANPSLFNRIRKIYEINTVFSIIYIFIIMISYIGCQ 432

Query:   185 FLELWKPAEDIEEV 198
              LE   P ++IEEV
Sbjct:   433 ILEWLMPRQNIEEV 446

GO:0006506 "GPI anchor biosynthetic process" evidence=ISS

GO:0003824 "catalytic activity" evidence=ISS

UNIPROTKB|Q8IJ83 PF10_0316 "N-acetylglucosaminyl-phosphatidylinositol biosynthetic protein, putative" [Plasmodium falciparum 3D7 (taxid:36329)]

 Score = 477 (173.0 bits), Expect = 2.1e-45, P = 2.1e-45
 Identities = 90/194 (46%), Positives = 135/194 (69%)

Query:     5 VRFIVGGDGPKRVRLEEMREKHSLQDRVEMLGAVPHAQVRSVLISGHIFLNSSLTEAFCI 64
             ++FI+GG+GPKR+ LEEMREK+ L + V +LG V    V+++L +GHIFLN+SLTEAFCI
Sbjct:   253 IKFIIGGEGPKRLLLEEMREKYHLHNSVVLLGKVKQENVKNILQTGHIFLNTSLTEAFCI 312

Query:    65 AILEAASCGLLTVSTRVGGVPEVLPDDMVVLAEPDPGDMVLAIRKAISLLPKIDPQVMHE 124
             AI+EAASCGLL +ST VGG+ EVLP DM++LA+P+  ++  A+ KA+ ++ K+D  + HE
Sbjct:   313 AIIEAASCGLLVISTDVGGISEVLPHDMMILAKPNHIELCKAVDKALKIVQKVDSNLFHE 372

Query:   125 RMKKLYNWHDVAKRTEIVYDRALECPNQNLVERLSRYLSCGAWAGKLFCLVMIIDYLLWR 184
             R+ K+Y+W  VA++TE VY   L   N +L  R+ +          ++  +++I Y+  +
Sbjct:   373 RLTKMYSWEKVAEKTEKVYMNVLNYANPSLFNRIRKIYEINTVFSIIYIFIIMISYIGCQ 432

Query:   185 FLELWKPAEDIEEV 198
              LE   P ++IEEV
Sbjct:   433 ILEWLMPRQNIEEV 446

GO:0003824 "catalytic activity" evidence=ISS

GO:0006506 "GPI anchor biosynthetic process" evidence=ISS

CGD|CAL0005841 SPT14 [Candida albicans (taxid:5476)]

 Score = 476 (172.6 bits), Expect = 2.7e-45, P = 2.7e-45
 Identities = 92/200 (46%), Positives = 141/200 (70%)

Query:     1 MRVKVRFIVGGDGPKRVRLEEMREKHSLQDRVEMLGAVPHAQVRSVLISGHIFLNSSLTE 60
             ++ KV+F++ GDGPK + LE+MREK+ LQ+RV ++GA+ H +VR V++ G I+L+ SLTE
Sbjct:   227 LKPKVKFLIAGDGPKFLDLEQMREKYFLQERVTLVGAIKHEEVRDVMVQGDIYLHPSLTE 286

Query:    61 AFCIAILEAASCGLLTVSTRVGGVPEVLPDDMVVLAEPDPGDMVLAIRKAISLLP--KID 118
             AF   I+EAASCGL  V+T+VGG+PEVLP++M   AEP+   ++ A   AI+ +   +ID
Sbjct:   287 AFGTVIVEAASCGLYVVTTKVGGIPEVLPNEMTSFAEPEENSLIDAAIDAINKIESNEID 346

Query:   119 PQVMHERMKKLYNWHDVAKRTEIVYDRA-LECPNQNLVERLSRYLSCGAWAGKLFCLVMI 177
                 H+ + K+Y+W+D+A+RTE VY+   L+  N++L+ RL RY  CG  AGKL+ L +I
Sbjct:   347 TSKFHDAVAKMYSWNDIARRTENVYNSLDLDKLNESLLHRLQRYYCCGIIAGKLYALCVI 406

Query:   178 IDYLLWRFLELWKPAEDIEE 197
             +D  ++  LE   PA+ I++
Sbjct:   407 VDIFIFVILEWLYPADHIDK 426

GO:0006355 "regulation of transcription, DNA-dependent" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0005783 "endoplasmic reticulum" evidence=IEA

GO:0008194 "UDP-glycosyltransferase activity" evidence=IEA

UNIPROTKB|Q5A6R7 SPT14 "Putative uncharacterized protein SPT14" [Candida albicans SC5314 (taxid:237561)]

 Score = 476 (172.6 bits), Expect = 2.7e-45, P = 2.7e-45
 Identities = 92/200 (46%), Positives = 141/200 (70%)

Query:     1 MRVKVRFIVGGDGPKRVRLEEMREKHSLQDRVEMLGAVPHAQVRSVLISGHIFLNSSLTE 60
             ++ KV+F++ GDGPK + LE+MREK+ LQ+RV ++GA+ H +VR V++ G I+L+ SLTE
Sbjct:   227 LKPKVKFLIAGDGPKFLDLEQMREKYFLQERVTLVGAIKHEEVRDVMVQGDIYLHPSLTE 286

Query:    61 AFCIAILEAASCGLLTVSTRVGGVPEVLPDDMVVLAEPDPGDMVLAIRKAISLLP--KID 118
             AF   I+EAASCGL  V+T+VGG+PEVLP++M   AEP+   ++ A   AI+ +   +ID
Sbjct:   287 AFGTVIVEAASCGLYVVTTKVGGIPEVLPNEMTSFAEPEENSLIDAAIDAINKIESNEID 346

Query:   119 PQVMHERMKKLYNWHDVAKRTEIVYDRA-LECPNQNLVERLSRYLSCGAWAGKLFCLVMI 177
                 H+ + K+Y+W+D+A+RTE VY+   L+  N++L+ RL RY  CG  AGKL+ L +I
Sbjct:   347 TSKFHDAVAKMYSWNDIARRTENVYNSLDLDKLNESLLHRLQRYYCCGIIAGKLYALCVI 406

Query:   178 IDYLLWRFLELWKPAEDIEE 197
             +D  ++  LE   PA+ I++
Sbjct:   407 VDIFIFVILEWLYPADHIDK 426

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0006355 "regulation of transcription, DNA-dependent" evidence=ISS

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	2.4.1	LOW CONFIDENCE prediction!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input:
	Sb02g008800.1	hypothetical protein (448 aa)
		(Sorghum bicolor)
Predicted Functional Partners:
	Sb06g033040.1	hypothetical protein (263 aa)				•		•	•		0.934
	Sb06g020130.1	hypothetical protein (263 aa)						•	•		0.932
	Sb10g026840.1	hypothetical protein (215 aa)						•			0.800
	Sb06g014820.1	hypothetical protein (223 aa)						•			0.800
	Sb04g026410.1	hypothetical protein (302 aa)						•	•		0.786
	Sb09g028160.1	hypothetical protein (82 aa)					•	•	•		0.697
	Sb01g021120.1	hypothetical protein (86 aa)					•		•		0.562
	Sb01g002910.1	hypothetical protein (242 aa)	•			•			•		0.517
	Sb06g033020.1	hypothetical protein (173 aa)					•	•	•		0.454
	Sb06g016470.1	hypothetical protein (172 aa)					•	•	•		0.454

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	222
cd03796	398	cd03796, GT1_PIG-A_like, This family is most close	1e-102
cd03801	374	cd03801, GT1_YqgM_like, This family is most closel	5e-28
cd03798	377	cd03798, GT1_wlbH_like, This family is most closel	2e-27
COG0438	381	COG0438, RfaG, Glycosyltransferase [Cell envelope	1e-21
pfam00534	158	pfam00534, Glycos_transf_1, Glycosyl transferases	9e-21
cd03800	398	cd03800, GT1_Sucrose_synthase, This family is most	1e-18
cd04962	371	cd04962, GT1_like_5, This family is most closely r	1e-18
cd03799	355	cd03799, GT1_amsK_like, This is a family of GT1 gl	1e-18
cd01635	229	cd01635, Glycosyltransferase_GTB_type, Glycosyltra	1e-17
cd03807	365	cd03807, GT1_WbnK_like, This family is most closel	2e-17
TIGR03999	374	TIGR03999, thiol_BshA, N-acetyl-alpha-D-glucosamin	1e-15
cd03811	353	cd03811, GT1_WabH_like, This family is most closel	1e-15
cd03817	374	cd03817, GT1_UGDG_like, This family is most closel	1e-14
cd05844	367	cd05844, GT1_like_7, Glycosyltransferases catalyze	1e-14
cd03814	364	cd03814, GT1_like_2, This family is most closely r	2e-14
cd03809	365	cd03809, GT1_mtfB_like, This family is most closel	2e-13
cd04951	360	cd04951, GT1_WbdM_like, This family is most closel	6e-13
cd04946	407	cd04946, GT1_AmsK_like, This family is most closel	5e-11
cd03808	359	cd03808, GT1_cap1E_like, This family is most close	5e-11
cd03821	375	cd03821, GT1_Bme6_like, This family is most closel	6e-11
PRK15427	406	PRK15427, PRK15427, colanic acid biosynthesis glyc	2e-09
cd03820	348	cd03820, GT1_amsD_like, This family is most closel	3e-09
TIGR02149	388	TIGR02149, glgA_Coryne, glycogen synthase, Coryneb	4e-09
TIGR03088	374	TIGR03088, stp2, sugar transferase, PEP-CTERM/EpsH	4e-09
cd03813	475	cd03813, GT1_like_3, This family is most closely r	5e-09
TIGR04005	406	TIGR04005, wcaL, colanic acid biosynthesis glycosy	2e-08
cd03795	357	cd03795, GT1_like_4, This family is most closely r	2e-08
cd03794	394	cd03794, GT1_wbuB_like, This family is most closel	2e-07
pfam13692	134	pfam13692, Glyco_trans_1_4, Glycosyl transferases	1e-06
TIGR04047	373	TIGR04047, MSMEG_0565_glyc, glycosyltransferase, M	2e-06
PLN02871	465	PLN02871, PLN02871, UDP-sulfoquinovose:DAG sulfoqu	2e-05
cd03818	396	cd03818, GT1_ExpC_like, This family is most closel	3e-05
TIGR02472	439	TIGR02472, sucr_P_syn_N, sucrose-phosphate synthas	4e-05
cd03802	335	cd03802, GT1_AviGT4_like, This family is most clos	5e-05
cd03812	358	cd03812, GT1_CapH_like, This family is most closel	9e-05
cd03819	355	cd03819, GT1_WavL_like, This family is most closel	1e-04
pfam13524	92	pfam13524, Glyco_trans_1_2, Glycosyl transferases	3e-04
TIGR02470	784	TIGR02470, sucr_synth, sucrose synthase	0.001
cd03823	359	cd03823, GT1_ExpE7_like, This family is most close	0.001
TIGR04063	397	TIGR04063, stp3, PEP-CTERM/exosortase A-associated	0.002
TIGR03449	405	TIGR03449, mycothiol_MshA, D-inositol-3-phosphate	0.003
cd03804	351	cd03804, GT1_wbaZ_like, This family is most closel	0.004

>gnl|CDD|99970 cd03796, GT1_PIG-A_like, This family is most closely related to the GT1 family of glycosyltransferases

 Score =  301 bits (772), Expect = e-102
 Identities = 120/175 (68%), Positives = 144/175 (82%), Gaps = 2/175 (1%)

Query: 4   KVRFIVGGDGPKRVRLEEMREKHSLQDRVEMLGAVPHAQVRSVLISGHIFLNSSLTEAFC 63
            VRFI+GGDGPKR+ LEEMREK++LQDRVE+LGAVPH +VR VL+ GHIFLN+SLTEAFC
Sbjct: 224 NVRFIIGGDGPKRILLEEMREKYNLQDRVELLGAVPHERVRDVLVQGHIFLNTSLTEAFC 283

Query: 64  IAILEAASCGLLTVSTRVGGVPEVLPDDMVVLAEPDPGDMVLAIRKAISLLP--KIDPQV 121
           IAI+EAASCGLL VSTRVGG+PEVLP DM++LAEPD   +V  + +AIS+L   K DP  
Sbjct: 284 IAIVEAASCGLLVVSTRVGGIPEVLPPDMILLAEPDVESIVRKLEEAISILRTGKHDPWS 343

Query: 122 MHERMKKLYNWHDVAKRTEIVYDRALECPNQNLVERLSRYLSCGAWAGKLFCLVM 176
            H R+KK+Y+W DVAKRTE VYDR L+ PN +L+ERL RY SCG  AGK+FCL+ 
Sbjct: 344 FHNRVKKMYSWEDVAKRTEKVYDRILQTPNLSLLERLKRYYSCGPIAGKIFCLLA 398

Phosphatidylinositol glycan-class A (PIG-A), an X-linked gene in humans, is necessary for the synthesis of N-acetylglucosaminyl-phosphatidylinositol, a very early intermediate in glycosyl phosphatidylinositol (GPI)-anchor biosynthesis. The GPI-anchor is an important cellular structure that facilitates the attachment of many proteins to cell surfaces. Somatic mutations in PIG-A have been associated with Paroxysmal Nocturnal Hemoglobinuria (PNH), an acquired hematological disorder. Length = 398

>gnl|CDD|99974 cd03801, GT1_YqgM_like, This family is most closely related to the GT1 family of glycosyltransferases and named after YqgM in Bacillus licheniformis about which little is known

 Score =  108 bits (272), Expect = 5e-28
 Identities = 53/148 (35%), Positives = 80/148 (54%), Gaps = 14/148 (9%)

Query: 5   VRFIVGGDGPKRVRLEEMREKHSLQDRVEMLGAVPHAQVRSVLISGHIFLNSSLTEAFCI 64
           VR ++ GDGP R  LE +  +  L DRV  LG VP   + ++  +  +F+  SL E F +
Sbjct: 231 VRLVIVGDGPLREELEALAAELGLGDRVTFLGFVPDEDLPALYAAADVFVLPSLYEGFGL 290

Query: 65  AILEAASCGLLTVSTRVGGVPEVLPDDM-VVLAEP-DPGDMVLAIRKAISLLPKIDPQVM 122
            +LEA + GL  V++ VGG+PEV+ D    +L  P DP  +  AI + +      DP++ 
Sbjct: 291 VLLEAMAAGLPVVASDVGGIPEVVEDGETGLLVPPGDPEALAEAILRLLD-----DPELR 345

Query: 123 H-------ERMKKLYNWHDVAKRTEIVY 143
                   ER+ + ++W  VA RTE VY
Sbjct: 346 RRLGEAARERVAERFSWDRVAARTEEVY 373

Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found mainly in certain bacteria and archaea. Length = 374

>gnl|CDD|99971 cd03798, GT1_wlbH_like, This family is most closely related to the GT1 family of glycosyltransferases

 Score =  106 bits (267), Expect = 2e-27
 Identities = 50/144 (34%), Positives = 80/144 (55%), Gaps = 2/144 (1%)

Query: 5   VRFIVGGDGPKRVRLEEMREKHSLQDRVEMLGAVPHAQVRSVLISGHIFLNSSLTEAFCI 64
           V  ++ GDGP R  LE +  +  L+DRV  LGAVPH +V +   +  +F+  SL E F +
Sbjct: 234 VHLVIVGDGPLREALEALAAELGLEDRVTFLGAVPHEEVPAYYAAADVFVLPSLREGFGL 293

Query: 65  AILEAASCGLLTVSTRVGGVPEVLPDDM-VVLAEP-DPGDMVLAIRKAISLLPKIDPQVM 122
            +LEA +CGL  V+T VGG+PE++ D    +L  P DP  +  AI + ++       +  
Sbjct: 294 VLLEAMACGLPVVATDVGGIPEIITDGENGLLVPPGDPEALAEAILRLLADPWLRLGRAA 353

Query: 123 HERMKKLYNWHDVAKRTEIVYDRA 146
             R+ + ++W +VA+R   +Y   
Sbjct: 354 RRRVAERFSWENVAERLLELYREV 377

wlbH in Bordetella parapertussis has been shown to be required for the biosynthesis of a trisaccharide that, when attached to the B. pertussis lipopolysaccharide (LPS) core (band B), generates band A LPS. Length = 377

>gnl|CDD|223515 COG0438, RfaG, Glycosyltransferase [Cell envelope biogenesis, outer membrane]

 Score = 91.2 bits (225), Expect = 1e-21
 Identities = 42/152 (27%), Positives = 86/152 (56%), Gaps = 5/152 (3%)

Query: 2   RVKVRFIVGGDGPKRV-RLEEMREKHSLQDRVEMLGAVPHAQVRSVLISGHIFLNSSLTE 60
              ++ ++ GDGP+R   LE++ +K  L+D V+ LG VP  ++  +L S  +F+  SL+E
Sbjct: 228 GPDIKLVIVGDGPERREELEKLAKKLGLEDNVKFLGYVPDEELAELLASADVFVLPSLSE 287

Query: 61  AFCIAILEAASCGLLTVSTRVGGVPEVLPDDM--VVLAEPDPGDMVLAIRKAISL--LPK 116
            F + +LEA + G   +++ VGG+PEV+ D    +++   D  ++  A+ + +    L +
Sbjct: 288 GFGLVLLEAMAAGTPVIASDVGGIPEVVEDGETGLLVPPGDVEELADALEQLLEDPELRE 347

Query: 117 IDPQVMHERMKKLYNWHDVAKRTEIVYDRALE 148
              +   ER+++ ++W  +A++   +Y+  L 
Sbjct: 348 ELGEAARERVEEEFSWERIAEQLLELYEELLA 379

Length = 381

>gnl|CDD|215979 pfam00534, Glycos_transf_1, Glycosyl transferases group 1

 Score = 84.6 bits (210), Expect = 9e-21
 Identities = 29/115 (25%), Positives = 57/115 (49%), Gaps = 2/115 (1%)

Query: 4   KVRFIVGGDGPKRVRLEEMREKHSLQDRVEMLGAVPHAQVRSVLISGHIFLNSSLTEAFC 63
            ++ ++ GDG +  +L+++  K  L+D V  +G VP   +  +     +F+  S  E F 
Sbjct: 33  NLKLVIVGDGEEEKKLKKLALKLGLEDNVIFVGFVPDEDLIELYRIADLFVLPSRYEGFG 92

Query: 64  IAILEAASCGLLTVSTRVGGVPEVLPDD--MVVLAEPDPGDMVLAIRKAISLLPK 116
           + +LEA + G+  ++T VGG  E++ D    +++   D   +  AI K +     
Sbjct: 93  LVLLEAMAAGVPVIATDVGGPAEIVKDGETGLLVDPGDAEALAEAIEKLLKDEEL 147

Mutations in this domain of human PIGA lead to disease (Paroxysmal Nocturnal haemoglobinuria). Members of this family transfer activated sugars to a variety of substrates, including glycogen, Fructose-6-phosphate and lipopolysaccharides. Members of this family transfer UDP, ADP, GDP or CMP linked sugars. The eukaryotic glycogen synthases may be distant members of this family. Length = 158

>gnl|CDD|99973 cd03800, GT1_Sucrose_synthase, This family is most closely related to the GT1 family of glycosyltransferases

 Score = 83.0 bits (206), Expect = 1e-18
 Identities = 43/148 (29%), Positives = 70/148 (47%), Gaps = 21/148 (14%)

Query: 8   IVGGDGPKRVR-----LEEMREKHSLQDRVEMLGAVPHAQVRSVLISGHIFLNSSLTEAF 62
           IVGG     +      L E+  +  + DRV+  G V    + ++  +  +F+N +L E F
Sbjct: 256 IVGGPRDDILAMDEEELRELARELGVIDRVDFPGRVSREDLPALYRAADVFVNPALYEPF 315

Query: 63  CIAILEAASCGLLTVSTRVGGVPEVLPDDMV--VLAEP-DPGDMVLAIRKAISLLPKIDP 119
            +  LEA +CGL  V+T VGG  +++  D V  +L +P DP  +  A+R+ ++     DP
Sbjct: 316 GLTALEAMACGLPVVATAVGGPRDIV-VDGVTGLLVDPRDPEALAAALRRLLT-----DP 369

Query: 120 QVMH-------ERMKKLYNWHDVAKRTE 140
            +          R +  Y W  VA R  
Sbjct: 370 ALRRRLSRAGLRRARARYTWERVAARLL 397

The sucrose-phosphate synthases in this family may be unique to plants and photosynthetic bacteria. This enzyme catalyzes the synthesis of sucrose 6-phosphate from fructose 6-phosphate and uridine 5'-diphosphate-glucose, a key regulatory step of sucrose metabolism. The activity of this enzyme is regulated by phosphorylation and moderated by the concentration of various metabolites and light. Length = 398

>gnl|CDD|100002 cd04962, GT1_like_5, This family is most closely related to the GT1 family of glycosyltransferases

 Score = 82.7 bits (205), Expect = 1e-18
 Identities = 42/127 (33%), Positives = 63/127 (49%), Gaps = 6/127 (4%)

Query: 2   RVKVRFIVGGDGPKRVRLEEMREKHSLQDRVEMLGAVPHAQVRSVLISGHIFLNSSLTEA 61
            V  R ++ GDGP+R   E +  +  LQD V  LG   H  V  +L    +FL  S  E+
Sbjct: 225 EVPARLLLVGDGPERSPAERLARELGLQDDVLFLGKQDH--VEELLSIADLFLLPSEKES 282

Query: 62  FCIAILEAASCGLLTVSTRVGGVPEVLPDDMVVLAEPDPGDMVLAIRKAISLLPKIDPQV 121
           F +A LEA +CG+  V++  GG+PEV+          D GD+      A+SLL   D ++
Sbjct: 283 FGLAALEAMACGVPVVASNAGGIPEVV-KHGETGFLVDVGDVEAMAEYALSLLE--DDEL 339

Query: 122 MHERMKK 128
             +   +
Sbjct: 340 -WQEFSR 345

Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found mainly in bacteria, while some of them are also found in Archaea and eukaryotes. Length = 371

>gnl|CDD|99972 cd03799, GT1_amsK_like, This is a family of GT1 glycosyltransferases found specifically in certain bacteria

 Score = 82.2 bits (204), Expect = 1e-18
 Identities = 39/117 (33%), Positives = 63/117 (53%), Gaps = 8/117 (6%)

Query: 3   VKVRFIVGGDGPKRVRLEEMREKHSLQDRVEMLGAVPHAQVRSVLISGHIFLNSSLT--- 59
           +  R  + GDGP R  LE +  +  L+DRV +LGA    +VR +L +  +F+  S+T   
Sbjct: 209 IDFRLDIVGDGPLRDELEALIAELGLEDRVTLLGAKSQEEVRELLRAADLFVLPSVTAAD 268

Query: 60  ---EAFCIAILEAASCGLLTVSTRVGGVPEVLPDDMV-VLAEP-DPGDMVLAIRKAI 111
              E   + ++EA + GL  +ST V G+PE++ D    +L  P DP  +  AI + +
Sbjct: 269 GDREGLPVVLMEAMAMGLPVISTDVSGIPELVEDGETGLLVPPGDPEALADAIERLL 325

amsK in Erwinia amylovora, has been reported to be involved in the biosynthesis of amylovoran, a exopolysaccharide acting as a virulence factor. Length = 355

>gnl|CDD|99959 cd01635, Glycosyltransferase_GTB_type, Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds

 Score = 78.0 bits (192), Expect = 1e-17
 Identities = 33/90 (36%), Positives = 53/90 (58%), Gaps = 1/90 (1%)

Query: 3   VKVRFIVGGDGPKRVRLEEMREKHSLQDRVEMLGAVPHAQVR-SVLISGHIFLNSSLTEA 61
             ++ ++ GDGP+R  LEE+     L DRV  LG +   ++   +L +  +F+  SL E 
Sbjct: 134 PDLKLVIAGDGPEREYLEELLAALLLLDRVIFLGGLDPEELLALLLAAADVFVLPSLREG 193

Query: 62  FCIAILEAASCGLLTVSTRVGGVPEVLPDD 91
           F + +LEA +CGL  ++T VGG PE++ D 
Sbjct: 194 FGLVVLEAMACGLPVIATDVGGPPEIVEDG 223

The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. The structures of the formed glycoconjugates are extremely diverse, reflecting a wide range of biological functions. The members of this family share a common GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. Length = 229

>gnl|CDD|99979 cd03807, GT1_WbnK_like, This family is most closely related to the GT1 family of glycosyltransferases

 Score = 79.2 bits (196), Expect = 2e-17
 Identities = 42/145 (28%), Positives = 75/145 (51%), Gaps = 9/145 (6%)

Query: 5   VRFIVGGDGPKRVRLEEM-REKHSLQDRVEMLGAVPHAQVRSVLISGHIFLNSSLTEAFC 63
            R ++ GDGP R  LE +  ++  L+D+V +LG      V ++L +  +F+ SSL+E F 
Sbjct: 225 ARLLLVGDGPDRANLELLALKELGLEDKVILLGERSD--VPALLNALDVFVLSSLSEGFP 282

Query: 64  IAILEAASCGLLTVSTRVGGVPEVLPDDMVVLAEPDPGDMVLAIRKAISLLPKIDPQVM- 122
             +LEA +CGL  V+T VG   E++ D   ++   DP  +  AI   ++       Q + 
Sbjct: 283 NVLLEAMACGLPVVATDVGDNAELVGDTGFLVPPGDPEALAEAIEALLADPALR--QALG 340

Query: 123 ---HERMKKLYNWHDVAKRTEIVYD 144
               ER+++ ++   + +  E +Y 
Sbjct: 341 EAARERIEENFSIEAMVEAYEELYR 365

WbnK in Shigella dysenteriae has been shown to be involved in the type 7 O-antigen biosynthesis. Length = 365

>gnl|CDD|234438 TIGR03999, thiol_BshA, N-acetyl-alpha-D-glucosaminyl L-malate synthase BshA

 Score = 74.2 bits (183), Expect = 1e-15
 Identities = 42/128 (32%), Positives = 65/128 (50%), Gaps = 8/128 (6%)

Query: 2   RVKVRFIVGGDGPKRVRLEEMREKHSLQDRVEMLGAVPHAQVRSVLISGHIFLNSSLTEA 61
            V  + ++ GDGP+R   E++  +  L DRV  LG      V  +L    +FL  S  E+
Sbjct: 227 EVPAKLLLVGDGPERSPAEQLVRELGLTDRVLFLGKQDD--VAELLSISDLFLLPSEKES 284

Query: 62  FCIAILEAASCGLLTVSTRVGGVPEVLPDDMV-VLAEPDPGDMVLAIRKAISLLPKIDPQ 120
           F +A LEA +CG+  +++  GG+PEV+   +   L   D GD+      AISLL   D +
Sbjct: 285 FGLAALEAMACGVPVIASNAGGIPEVVEHGVTGFLC--DVGDVETMAEYAISLLE--DEE 340

Query: 121 VMHERMKK 128
            + +R   
Sbjct: 341 -LLQRFSA 347

Members of this protein family are BshA, a glycosyltransferase required for bacillithiol biosynthesis. This enzyme combines UDP-GlcNAc and L-malate to form N-acetyl-alpha-D-glucosaminyl L-malate synthase. Bacillithiol is a low-molecular-weight thiol, an analog of glutathione and mycothiol, and is found largely in the Firmicutes [Biosynthesis of cofactors, prosthetic groups, and carriers, Glutathione and analogs]. Length = 374

>gnl|CDD|99982 cd03811, GT1_WabH_like, This family is most closely related to the GT1 family of glycosyltransferases

 Score = 73.9 bits (182), Expect = 1e-15
 Identities = 39/130 (30%), Positives = 56/130 (43%), Gaps = 3/130 (2%)

Query: 2   RVKVRFIVGGDGPKRVRLEEMREKHSLQDRVEMLGAVPHAQVRSVLISGHIFLNSSLTEA 61
               R ++ GDGP R  LE + ++  L DRV  LG          L +  +F+ SS  E 
Sbjct: 218 GPDARLVILGDGPLREELEALAKELGLADRVHFLGFQS--NPYPYLKAADLFVLSSRYEG 275

Query: 62  FCIAILEAASCGLLTVSTRVGGVPEVLPDDMVVLAEPDPGDMVLAIRKAISLLPKIDPQV 121
           F   +LEA + G   V+T   G  E+L D    L  P  GD       A++LL  +    
Sbjct: 276 FPNVLLEAMALGTPVVATDCPGPREILEDGENGLLVP-VGDEAALAAAALALLDLLLDPE 334

Query: 122 MHERMKKLYN 131
           + ER+     
Sbjct: 335 LRERLAAAAR 344

WabH in Klebsiella pneumoniae has been shown to transfer a GlcNAc residue from UDP-GlcNAc onto the acceptor GalUA residue in the cellular outer core. Length = 353

>gnl|CDD|99987 cd03817, GT1_UGDG_like, This family is most closely related to the GT1 family of glycosyltransferases

 Score = 71.5 bits (176), Expect = 1e-14
 Identities = 40/148 (27%), Positives = 68/148 (45%), Gaps = 11/148 (7%)

Query: 4   KVRFIVGGDGPKRVRLEEMREKHSLQDRVEMLGAVPHAQVRSVLISGHIFLNSSLTEAFC 63
            V+ ++ GDGP+R  LEE+  +  L DRV   G VP  ++     +  +F+ +S TE   
Sbjct: 233 DVKLVIVGDGPEREELEELARELGLADRVIFTGFVPREELPDYYKAADLFVFASTTETQG 292

Query: 64  IAILEAASCGLLTVSTRVGGVPEVLPDDMV-VLAEPDPGDMVLAIRKAISLLPKIDPQVM 122
           + +LEA + GL  V+    G+P+++ D     L  P       A+ +A+  L +      
Sbjct: 293 LVLLEAMAAGLPVVAVDAPGLPDLVADGENGFLFPPGDE----ALAEALLRLLQDPEL-- 346

Query: 123 HERMKKLYNW----HDVAKRTEIVYDRA 146
             R+ K           AK+ E +Y+  
Sbjct: 347 RRRLSKNAEESAEKFSFAKKVEKLYEEV 374

UDP-glucose-diacylglycerol glucosyltransferase (UGDG; also known as 1,2-diacylglycerol 3-glucosyltransferase) catalyzes the transfer of glucose from UDP-glucose to 1,2-diacylglycerol forming 3-D-glucosyl-1,2-diacylglycerol. Length = 374

>gnl|CDD|100003 cd05844, GT1_like_7, Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds

 Score = 71.1 bits (175), Expect = 1e-14
 Identities = 37/92 (40%), Positives = 51/92 (55%), Gaps = 6/92 (6%)

Query: 5   VRFIVGGDGPKRVRLEEMREKHSLQDRVEMLGAVPHAQVRSVLISGHIFLNSSLT----- 59
           VR ++ GDGP    LE +     L  RV  LGA PHA+VR ++    IFL  S+T     
Sbjct: 220 VRLVIIGDGPLLAALEALARALGLGGRVTFLGAQPHAEVRELMRRARIFLQPSVTAPSGD 279

Query: 60  -EAFCIAILEAASCGLLTVSTRVGGVPEVLPD 90
            E   + +LEA + G+  V+TR GG+PE + D
Sbjct: 280 AEGLPVVLLEAQASGVPVVATRHGGIPEAVED 311

The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. Length = 367

>gnl|CDD|99985 cd03814, GT1_like_2, This family is most closely related to the GT1 family of glycosyltransferases

 Score = 70.7 bits (174), Expect = 2e-14
 Identities = 34/113 (30%), Positives = 53/113 (46%), Gaps = 8/113 (7%)

Query: 2   RVKVRFIVGGDGPKRVRLEEMREKHSLQDRVEMLGAVPHAQVRSVLISGHIFLNSSLTEA 61
           R  VR ++ GDGP R RLE           V  LG +   ++ +   S  +F+  S TE 
Sbjct: 225 RPPVRLVIVGDGPARARLEARY------PNVHFLGFLDGEELAAAYASADVFVFPSRTET 278

Query: 62  FCIAILEAASCGLLTVSTRVGGVPEVLPDDMV-VLAEP-DPGDMVLAIRKAIS 112
           F + +LEA + GL  V+   GG  +++ D    +L EP D      A+   ++
Sbjct: 279 FGLVVLEAMASGLPVVAPDAGGPADIVTDGENGLLVEPGDAEAFAAALAALLA 331

Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found mainly in bacteria and eukaryotes. Length = 364

>gnl|CDD|99981 cd03809, GT1_mtfB_like, This family is most closely related to the GT1 family of glycosyltransferases

 Score = 67.8 bits (166), Expect = 2e-13
 Identities = 39/136 (28%), Positives = 62/136 (45%), Gaps = 7/136 (5%)

Query: 8   IVGGDGPKRVRLEEMREKHSLQDRVEMLGAVPHAQVRSVLISG-HIFLNSSLTEAFCIAI 66
           IVG  G     L     +  L DRV  LG V   ++ + L  G   F+  SL E F + +
Sbjct: 231 IVGKRGWLNEELLARLRELGLGDRVRFLGYVSDEELAA-LYRGARAFVFPSLYEGFGLPV 289

Query: 67  LEAASCGLLTVSTRVGGVPEVLPDDMVVLAEP-DPGDMVLAIRKAISLLPKIDPQVMH-- 123
           LEA +CG   +++ +  +PEV  D   +  +P DP  +  AI + +      +       
Sbjct: 290 LEAMACGTPVIASNISSLPEVAGDA-ALYFDPLDPEALAAAIERLLEDPALREELRERGL 348

Query: 124 ERMKKLYNWHDVAKRT 139
            R K+ ++W   A+RT
Sbjct: 349 ARAKR-FSWEKTARRT 363

mtfB (mannosyltransferase B) in E. coli has been shown to direct the growth of the O9-specific polysaccharide chain. It transfers two mannoses into the position 3 of the previously synthesized polysaccharide. Length = 365

>gnl|CDD|100000 cd04951, GT1_WbdM_like, This family is most closely related to the GT1 family of glycosyltransferases and is named after WbdM in Escherichia coli

 Score = 66.5 bits (163), Expect = 6e-13
 Identities = 36/142 (25%), Positives = 72/142 (50%), Gaps = 4/142 (2%)

Query: 4   KVRFIVGGDGPKRVRLEEMREKHSLQDRVEMLGAVPHAQVRSVLISGHIFLNSSLTEAFC 63
            ++ ++ GDGP R  LE + +   L +RV++LG      + +   +  +F+ SS  E F 
Sbjct: 219 DIKLLIAGDGPLRATLERLIKALGLSNRVKLLG--LRDDIAAYYNAADLFVLSSAWEGFG 276

Query: 64  IAILEAASCGLLTVSTRVGGVPEVLPDDMVVLAEPDPGDMVLAIRKAISLLPKIDPQV-- 121
           + + EA +C L  V+T  GGV EV+ D  +++   DP  +   I + + +  +    +  
Sbjct: 277 LVVAEAMACELPVVATDAGGVREVVGDSGLIVPISDPEALANKIDEILKMSGEERDIIGA 336

Query: 122 MHERMKKLYNWHDVAKRTEIVY 143
             ER+ K ++ + + ++   +Y
Sbjct: 337 RRERIVKKFSINSIVQQWLTLY 358

In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found in bacteria. Length = 360

>gnl|CDD|99997 cd04946, GT1_AmsK_like, This family is most closely related to the GT1 family of glycosyltransferases

 Score = 61.2 bits (149), Expect = 5e-11
 Identities = 31/110 (28%), Positives = 54/110 (49%), Gaps = 13/110 (11%)

Query: 11  GDGPKRVRLEEMREKHSLQDRVEMLGAVPHAQV------RSVLISGHIFLNSSLTEAFCI 64
           G GP    L+E+ E       V   G + +++V        V     +F+N S +E   +
Sbjct: 270 GGGPLEDTLKELAESKPENISVNFTGELSNSEVYKLYKENPV----DVFVNLSESEGLPV 325

Query: 65  AILEAASCGLLTVSTRVGGVPEVLPDDMVVL---AEPDPGDMVLAIRKAI 111
           +I+EA S G+  ++T VGG PE++ +    L    +P P ++V ++ K I
Sbjct: 326 SIMEAMSFGIPVIATNVGGTPEIVDNGGNGLLLSKDPTPNELVSSLSKFI 375

AmsK is involved in the biosynthesis of amylovoran, which functions as a virulence factor. It functions as a glycosyl transferase which transfers galactose from UDP-galactose to a lipid-linked amylovoran-subunit precursor. The members of this family are found mainly in bacteria and Archaea. Length = 407

>gnl|CDD|99980 cd03808, GT1_cap1E_like, This family is most closely related to the GT1 family of glycosyltransferases

 Score = 60.6 bits (148), Expect = 5e-11
 Identities = 38/149 (25%), Positives = 63/149 (42%), Gaps = 17/149 (11%)

Query: 2   RVKVRFIVGGDGPKRVRLEEMR-EKHSLQDRVEMLGAVPHAQVRSVLISGHIFLNSSLTE 60
              VR ++ GDG +      +  EK  L+ RVE LG      V  +L +  +F+  S  E
Sbjct: 217 GPNVRLLLVGDGDEENPAAILEIEKLGLEGRVEFLGFR--DDVPELLAAADVFVLPSYRE 274

Query: 61  AFCIAILEAASCGLLTVSTRVGGVPEVLPDDMV-VLAEP-DPGDMVLAIRKAISLLPKID 118
                +LEA + G   ++T V G  E + D +   L  P D   +  AI + I      D
Sbjct: 275 GLPRVLLEAMAMGRPVIATDVPGCREAVIDGVNGFLVPPGDAEALADAIERLIE-----D 329

Query: 119 PQVMH-------ERMKKLYNWHDVAKRTE 140
           P++         +R ++ ++   V K+  
Sbjct: 330 PELRARMGQAARKRAEEEFDEEIVVKKLL 358

cap1E in Streptococcus pneumoniae is required for the synthesis of type 1 capsular polysaccharides. Length = 359

>gnl|CDD|99991 cd03821, GT1_Bme6_like, This family is most closely related to the GT1 family of glycosyltransferases

 Score = 60.4 bits (147), Expect = 6e-11
 Identities = 32/139 (23%), Positives = 61/139 (43%), Gaps = 7/139 (5%)

Query: 7   FIVGGDGP-KRVRLEEMREKHSLQDRVEMLGAVPHAQVRSVLISGHIFLNSSLTEAFCIA 65
            I G D    R  L+++     L+DRV   G +      + L    +F+  S +E F I 
Sbjct: 238 VIAGPDEGGYRAELKQIAAALGLEDRVTFTGMLYGEDKAAALADADLFVLPSHSENFGIV 297

Query: 66  ILEAASCGLLTVSTRVGGVPEVLPDDMVVLAEPDPGDMVLAIRKAISLLPKIDPQVMHER 125
           + EA +CG   V+T      E++      + + D   +  A+R+A+ L      + M E 
Sbjct: 298 VAEALACGTPVVTTDKVPWQELIEYGCGWVVDDDVDALAAALRRALEL--PQRLKAMGEN 355

Query: 126 ----MKKLYNWHDVAKRTE 140
               +++ ++W  +A++  
Sbjct: 356 GRALVEERFSWTAIAQQLL 374

Bme6 in Brucella melitensis has been shown to be involved in the biosynthesis of a polysaccharide. Length = 375

>gnl|CDD|185325 PRK15427, PRK15427, colanic acid biosynthesis glycosyltransferase WcaL; Provisional

 Score = 56.3 bits (136), Expect = 2e-09
 Identities = 32/92 (34%), Positives = 52/92 (56%), Gaps = 6/92 (6%)

Query: 3   VKVRFIVGGDGPKRVRLEEMREKHSLQDRVEMLGAVPHAQVRSVLISGHIFLNSSLT--- 59
           V  R+ + G GP   RL  + E++ L+D VEM G  P  +V+++L    +FL  S+T   
Sbjct: 252 VAFRYRILGIGPWERRLRTLIEQYQLEDVVEMPGFKPSHEVKAMLDDADVFLLPSVTGAD 311

Query: 60  ---EAFCIAILEAASCGLLTVSTRVGGVPEVL 88
              E   +A++EA + G+  VST   G+PE++
Sbjct: 312 GDMEGIPVALMEAMAVGIPVVSTLHSGIPELV 343

Length = 406

>gnl|CDD|99990 cd03820, GT1_amsD_like, This family is most closely related to the GT1 family of glycosyltransferases

 Score = 55.7 bits (135), Expect = 3e-09
 Identities = 33/109 (30%), Positives = 55/109 (50%), Gaps = 8/109 (7%)

Query: 8   IVGGDGPKRVRLEEMREKHSLQDRVEMLGAVPHAQVRSVLISGHIFLNSSLTEAFCIAIL 67
           IVG DGP+R  LE + ++  L+DRV +LG   +  +        IF+ +S  E F + +L
Sbjct: 214 IVG-DGPEREALEALIKELGLEDRVILLGFTKN--IEEYYAKASIFVLTSRFEGFPMVLL 270

Query: 68  EAASCGLLTVST-RVGGVPEVLPDDMV--VLAEP-DPGDMVLAIRKAIS 112
           EA + GL  +S     G  E++ +D V  +L    D   +  A+ + + 
Sbjct: 271 EAMAFGLPVISFDCPTGPSEII-EDGVNGLLVPNGDVEALAEALLRLME 318

AmSD in Erwinia amylovora has been shown to be involved in the biosynthesis of amylovoran, the acidic exopolysaccharide acting as a virulence factor. This enzyme may be responsible for the formation of galactose alpha-1,6 linkages in amylovoran. Length = 348

>gnl|CDD|233748 TIGR02149, glgA_Coryne, glycogen synthase, Corynebacterium family

 Score = 55.6 bits (134), Expect = 4e-09
 Identities = 43/148 (29%), Positives = 71/148 (47%), Gaps = 23/148 (15%)

Query: 19  LEEMREKHSLQDRV--------EMLGAVPHAQVRSVLISGHIFLNSSLTEAFCIAILEAA 70
            EE+R+  +L DR         +ML   P  ++  +L +  +F+  S+ E   I  LEA 
Sbjct: 245 AEEVRQAVALLDRNRTGIIWINKML---PKEELVELLSNAEVFVCPSIYEPLGIVNLEAM 301

Query: 71  SCGLLTVSTRVGGVPEVLPDDMV-VLAEPDPGD---MVLAIRKAISLLPKIDP------- 119
           +CG   V++  GG+PEV+ D     L  PD  D       + KAI++L   DP       
Sbjct: 302 ACGTPVVASATGGIPEVVVDGETGFLVPPDNSDADGFQAELAKAINILLA-DPELAKKMG 360

Query: 120 QVMHERMKKLYNWHDVAKRTEIVYDRAL 147
               +R ++ ++W  +AK+T  +Y + L
Sbjct: 361 IAGRKRAEEEFSWGSIAKKTVEMYRKVL 388

This model describes Corynebacterium glutamicum GlgA and closely related proteins in several other species. This enzyme is required for glycogen biosynthesis and appears to replace the distantly related TIGR02095 family of ADP-glucose type glycogen synthase in Corynebacterium glutamicum, Mycobacterium tuberculosis, Bifidobacterium longum, and Streptomyces coelicolor [Energy metabolism, Biosynthesis and degradation of polysaccharides]. Length = 388

>gnl|CDD|132132 TIGR03088, stp2, sugar transferase, PEP-CTERM/EpsH1 system associated

 Score = 55.1 bits (133), Expect = 4e-09
 Identities = 39/150 (26%), Positives = 69/150 (46%), Gaps = 10/150 (6%)

Query: 4   KVRFIVGGDGPKRVRLEEMREKHSLQDRVEMLGAVPHAQVRSVLISGHIFLNSSLTEAFC 63
           ++R ++ GDGP R   E+M     L   V + G      V +++ +  +F+  SL E   
Sbjct: 229 RLRLVIVGDGPARGACEQMVRAAGLAHLVWLPGE--RDDVPALMQALDLFVLPSLAEGIS 286

Query: 64  IAILEAASCGLLTVSTRVGGVPEVLPDDMVVLAEPDPGDMVLAIRKAIS------LLPKI 117
             ILEA + GL  ++T VGG PE++   +     P PGD V A+ +A+          + 
Sbjct: 287 NTILEAMASGLPVIATAVGGNPELVQHGVTGALVP-PGDAV-ALARALQPYVSDPAARRA 344

Query: 118 DPQVMHERMKKLYNWHDVAKRTEIVYDRAL 147
                  R ++ ++ + +      +YD+ L
Sbjct: 345 HGAAGRARAEQQFSINAMVAAYAGLYDQLL 374

Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate. Length = 374

>gnl|CDD|99984 cd03813, GT1_like_3, This family is most closely related to the GT1 family of glycosyltransferases

 Score = 55.3 bits (134), Expect = 5e-09
 Identities = 25/103 (24%), Positives = 46/103 (44%), Gaps = 14/103 (13%)

Query: 28  LQDRVEMLGAVPHAQVRSVLISGHIFLNSSLTEAFCIAILEAASCGLLTVSTRVGGVPEV 87
           L+D V+  G      V+  L    + + +S++E   + ILEA + G+  V+T VG   E+
Sbjct: 352 LEDNVKFTG---FQNVKEYLPKLDVLVLTSISEGQPLVILEAMAAGIPVVATDVGSCREL 408

Query: 88  LPDDMVVLAEPDPGDMVLAIRKAISLLPKIDPQVMHERMKKLY 130
           + +     A    G++V          P  DP+ +   + +L 
Sbjct: 409 I-EGADDEALGPAGEVV----------PPADPEALARAILRLL 440

Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found mainly in bacteria, while some of them are also found in Archaea and eukaryotes. Length = 475

>gnl|CDD|188520 TIGR04005, wcaL, colanic acid biosynthesis glycosyltransferase WcaL

 Score = 53.4 bits (128), Expect = 2e-08
 Identities = 32/92 (34%), Positives = 52/92 (56%), Gaps = 6/92 (6%)

Query: 3   VKVRFIVGGDGPKRVRLEEMREKHSLQDRVEMLGAVPHAQVRSVLISGHIFLNSSLT--- 59
           V  R+ + G GP   RL  + E++ L+D VEM G  P  +V+++L    +FL  S+T   
Sbjct: 252 VAFRYRILGIGPWERRLRTLIEQYQLEDVVEMPGFKPSHEVKAMLDDADVFLLPSVTGTD 311

Query: 60  ---EAFCIAILEAASCGLLTVSTRVGGVPEVL 88
              E   +A++EA + G+  VST   G+PE++
Sbjct: 312 GDMEGIPVALMEAMAVGIPVVSTVHSGIPELV 343

This gene is one of the glycosyl transferases involved in the biosynthesis of colanic acid, an exopolysaccharide expressed in Enterobacteraceae species. Length = 406

>gnl|CDD|99969 cd03795, GT1_like_4, This family is most closely related to the GT1 family of glycosyltransferases

 Score = 53.4 bits (129), Expect = 2e-08
 Identities = 25/82 (30%), Positives = 42/82 (51%), Gaps = 2/82 (2%)

Query: 4   KVRFIVGGDGPKRVRLEEMREKHSLQDRVEMLGAVPHAQVRSVLISGHIFLNSSL--TEA 61
               ++ G+GP    LE +     L DRV  LG +   +  ++L +  +F+  S+  +EA
Sbjct: 218 DAPLVIVGEGPLEAELEALAAALGLLDRVRFLGRLDDEEKAALLAACDVFVFPSVERSEA 277

Query: 62  FCIAILEAASCGLLTVSTRVGG 83
           F I +LEA + G   +ST +G 
Sbjct: 278 FGIVLLEAMAFGKPVISTEIGT 299

Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP-linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found mainly in bacteria and eukaryotes. Length = 357

>gnl|CDD|99968 cd03794, GT1_wbuB_like, This family is most closely related to the GT1 family of glycosyltransferases

 Score = 50.3 bits (121), Expect = 2e-07
 Identities = 32/150 (21%), Positives = 64/150 (42%), Gaps = 16/150 (10%)

Query: 1   MRVKVRFIVGGDGPKRVRLEEMREKHSLQDRVEMLGAVPHAQVRSVLISGHIFLNSSLTE 60
            R  +RF++ GDGP++  L+E+ +   L D V  LG VP  ++  +L +  + L      
Sbjct: 247 DRPDIRFLIVGDGPEKEELKELAKALGL-DNVTFLGRVPKEELPELLAAADVGLVPLKPG 305

Query: 61  AFCIA-----ILEAASCGLLTVSTRVGGVPEVLPDD---MVVLAEPDPGDMVLAIRKAIS 112
                     + E  + G   +++  G   E++ +    +VV    DP  +  AI +   
Sbjct: 306 PAFEGVSPSKLFEYMAAGKPVLASVDGESAELVEEAGAGLVVPPG-DPEALAAAILEL-- 362

Query: 113 LLPKIDPQVM----HERMKKLYNWHDVAKR 138
           L    +   M       +++ ++   +A+R
Sbjct: 363 LDDPEERAEMGENGRRYVEEKFSREKLAER 392

wbuB in E. coli is involved in the biosynthesis of the O26 O-antigen. It has been proposed to function as an N-acetyl-L-fucosamine (L-FucNAc) transferase. Length = 394

>gnl|CDD|222322 pfam13692, Glyco_trans_1_4, Glycosyl transferases group 1

 Score = 46.2 bits (110), Expect = 1e-06
 Identities = 26/110 (23%), Positives = 42/110 (38%), Gaps = 11/110 (10%)

Query: 4   KVRFIVGGDGPKRVRLEEMREKHSLQDRVEMLGAVPHAQVRSVLISGHIFLNSSLT-EAF 62
            V   + G GP+ +          L   V  LG V    + ++L S  + L         
Sbjct: 34  DVELHIIGSGPEEL--------ARLAPNVHFLGFVE--DLAALLASADVALAPLRFGAGS 83

Query: 63  CIAILEAASCGLLTVSTRVGGVPEVLPDDMVVLAEPDPGDMVLAIRKAIS 112
            + +LEA + GL  V+T +G           VL   DP +   AI + ++
Sbjct: 84  PLKLLEALAAGLPVVATDIGAEGLPEDLGWGVLVADDPEEFAEAIVRLLA 133

Length = 134

>gnl|CDD|234448 TIGR04047, MSMEG_0565_glyc, glycosyltransferase, MSMEG_0565 family

 Score = 47.4 bits (113), Expect = 2e-06
 Identities = 31/118 (26%), Positives = 49/118 (41%), Gaps = 5/118 (4%)

Query: 31  RVEMLGAVPHAQVRSVLISGHIFLNSSLTEAFCIAILEAASCGLLTVSTRVGGVPEVLPD 90
            V + G VP A + ++      F   SL E F + +LEA + G+  V++ +    E L  
Sbjct: 258 AVVITGPVPDADLPALYRCADAFAFPSLKEGFGLVVLEALASGIPVVASDIAPFTEYLGR 317

Query: 91  DMVVLAEP-DPGDMVLAIRKAISLLPKIDPQVMHE--RMKKLYNWHDVAKRTEIVYDR 145
                A+P DP  +  A+  A  L P   P ++     +   Y W   A+     Y R
Sbjct: 318 FDAAWADPSDPDSIADALALA--LDPARRPALLAAGPELAARYTWDASARAHLEFYRR 373

A conserved gene cluster found sporadically from Actinobacteria to Proteobacteria to Cyanobacteria features a radical SAM protein, an N-acetyltransferase, an oxidoreductase, and two additional proteins whose functional classes are unclear. The metabolic role of the cluster is probably biosynthetic. This glycosyltransferase, named from member MSMEG_0565 from Mycobacterium smegmatis, occurs in most but not all instances of the cluster [Unknown function, Enzymes of unknown specificity]. Length = 373

>gnl|CDD|215469 PLN02871, PLN02871, UDP-sulfoquinovose:DAG sulfoquinovosyltransferase

 Score = 44.3 bits (105), Expect = 2e-05
 Identities = 32/112 (28%), Positives = 50/112 (44%), Gaps = 6/112 (5%)

Query: 5   VRFIVGGDGPKRVRLEEMREKHSLQDRVEMLGAVPHAQVRSVLISGHIFLNSSLTEAFCI 64
            R    GDGP R  LE+M             G +   ++     SG +F+  S +E    
Sbjct: 291 ARLAFVGDGPYREELEKMFAGT----PTVFTGMLQGDELSQAYASGDVFVMPSESETLGF 346

Query: 65  AILEAASCGLLTVSTRVGGVPEVLPDDM--VVLAEPDPGDMVLAIRKAISLL 114
            +LEA + G+  V+ R GG+P+++P D          PGD+   + K  +LL
Sbjct: 347 VVLEAMASGVPVVAARAGGIPDIIPPDQEGKTGFLYTPGDVDDCVEKLETLL 398

Length = 465

>gnl|CDD|99988 cd03818, GT1_ExpC_like, This family is most closely related to the GT1 family of glycosyltransferases

 Score = 43.7 bits (104), Expect = 3e-05
 Identities = 34/104 (32%), Positives = 48/104 (46%), Gaps = 29/104 (27%)

Query: 8   IVGGDGP------------KRVRLEEMREKHSLQDRVEMLGAVPHAQVRSVL-ISG-HIF 53
           IVGGDG             K+  L+E+  +  L  RV  LG VP+ Q  ++L +S  H++
Sbjct: 248 IVGGDGVSYGAPPPDGESWKQHMLDELGGRLDLS-RVHFLGRVPYDQYLALLQVSDVHVY 306

Query: 54  L------NSSLTEAFCIAILEAASCGLLTVSTRVGGVPEVLPDD 91
           L      + SL        LEA +CG L V +    V EV+ D 
Sbjct: 307 LTYPFVLSWSL--------LEAMACGCLVVGSDTAPVREVITDG 342

ExpC in Rhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucan (exopolysaccharide II). Length = 396

>gnl|CDD|131525 TIGR02472, sucr_P_syn_N, sucrose-phosphate synthase, putative, glycosyltransferase domain

 Score = 43.2 bits (102), Expect = 4e-05
 Identities = 26/71 (36%), Positives = 39/71 (54%), Gaps = 12/71 (16%)

Query: 49  SGHIFLNSSLTEAFCIAILEAASCGLLTVSTRVGGVPEVLPDDMV------VLAEP-DPG 101
           S  IF+N +LTE F + +LEAA+CGL  V+T  GG     P D++      +L +  D  
Sbjct: 340 SRGIFVNPALTEPFGLTLLEAAACGLPIVATDDGG-----PRDIIANCRNGLLVDVLDLE 394

Query: 102 DMVLAIRKAIS 112
            +  A+  A+S
Sbjct: 395 AIASALEDALS 405

This family consists of the N-terminal regions, or in some cases the entirety, of bacterial proteins closely related to plant sucrose-phosphate synthases (SPS). The C-terminal domain (TIGR02471), found with most members of this family, resembles both bona fide plant sucrose-phosphate phosphatases (SPP) and the SPP-like domain of plant SPS. At least two members of this family lack the SPP-like domain, which may have binding or regulatory rather than enzymatic activity by analogy to plant SPS. This enzyme produces sucrose 6-phosphate and UDP from UDP-glucose and D-fructose 6-phosphate, and may be encoded near the gene for fructokinase. Length = 439

>gnl|CDD|99975 cd03802, GT1_AviGT4_like, This family is most closely related to the GT1 family of glycosyltransferases

 Score = 43.0 bits (102), Expect = 5e-05
 Identities = 27/120 (22%), Positives = 49/120 (40%), Gaps = 7/120 (5%)

Query: 8   IVGGDGPKRVRLEEMREKHSLQDRVEMLGAVPHAQVRSVLISGHI-FLNSSL-TEAFCIA 65
           + G          E+  +      +E LG V  A+ ++ L+      L   L  E F + 
Sbjct: 202 LAGPVSDPDYFYREIAPELLDGPDIEYLGEVGGAE-KAELLGNARALLFPILWEEPFGLV 260

Query: 66  ILEAASCGLLTVSTRVGGVPEVLPDDMVVLAEPDPGDMVLAIRKAISLLPKIDPQVMHER 125
           ++EA +CG   ++ R G VPEV+ D +         ++  A+ +A     ++D      R
Sbjct: 261 MIEAMACGTPVIAFRRGAVPEVVEDGVTGFLVDSVEELAAAVARA----DRLDRAACRRR 316

aviGT4 in Streptomyces viridochromogenes has been shown to be involved in biosynthesis of oligosaccharide antibiotic avilamycin A. Inactivation of aviGT4 resulted in a mutant that accumulated a novel avilamycin derivative lacking the terminal eurekanate residue. Length = 335

>gnl|CDD|99983 cd03812, GT1_CapH_like, This family is most closely related to the GT1 family of glycosyltransferases

 Score = 42.2 bits (100), Expect = 9e-05
 Identities = 19/73 (26%), Positives = 36/73 (49%), Gaps = 2/73 (2%)

Query: 2   RVKVRFIVGGDGPKRVRLEEMREKHSLQDRVEMLGAVPHAQVRSVLISGHIFLNSSLTEA 61
               + ++ GDG     +++  ++  L+D+V  LG      V  +L +  +FL  SL E 
Sbjct: 221 NPNAKLLLVGDGELEEEIKKKVKELGLEDKVIFLGVR--NDVPELLQAMDVFLFPSLYEG 278

Query: 62  FCIAILEAASCGL 74
             + ++EA + GL
Sbjct: 279 LPLVLIEAQASGL 291

capH in Staphylococcus aureus has been shown to be required for the biosynthesis of the type 1 capsular polysaccharide (CP1). Length = 358

>gnl|CDD|99989 cd03819, GT1_WavL_like, This family is most closely related to the GT1 family of glycosyltransferases

 Score = 41.4 bits (98), Expect = 1e-04
 Identities = 37/144 (25%), Positives = 60/144 (41%), Gaps = 16/144 (11%)

Query: 8   IVGGDGPKRVR---LEEMREKHSLQDRVEMLGAVPHAQVRSVLISGHIFLNSSLT-EAFC 63
           IVG    +R     L E+ ++  LQDRV  +G      + +      I +++S   EAF 
Sbjct: 221 IVGDAQGRRFYYAELLELIKRLGLQDRVTFVGHCSD--MPAAYALADIVVSASTEPEAFG 278

Query: 64  IAILEAASCGLLTVSTRVGGVPEVLPDDMVVLAEP--DPGDMVLAIRKAISLLPKIDPQV 121
              +EA + G   +++  GG  E +      L  P  D   +  A+ + +SLLP      
Sbjct: 279 RTAVEAQAMGRPVIASDHGGARETVRPGETGLLVPPGDAEALAQALDQILSLLP------ 332

Query: 122 MHERMKKLYNWHDVAKRTEIVYDR 145
             E   K++    +   T   YDR
Sbjct: 333 --EGRAKMFAKARMCVETLFSYDR 354

WavL in Vibrio cholerae has been shown to be involved in the biosynthesis of the lipopolysaccharide core. Length = 355

>gnl|CDD|222197 pfam13524, Glyco_trans_1_2, Glycosyl transferases group 1

 Score = 38.3 bits (90), Expect = 3e-04
 Identities = 15/61 (24%), Positives = 31/61 (50%)

Query: 52  IFLNSSLTEAFCIAILEAASCGLLTVSTRVGGVPEVLPDDMVVLAEPDPGDMVLAIRKAI 111
           I LN S  ++  + + EAA+CG   ++ R  G+ E+      ++   DP ++   +R  +
Sbjct: 1   IVLNPSRRDSPNMRVFEAAACGAPLLTDRTPGLEELFEPGEEIVLYRDPEELAEKLRYLL 60

Query: 112 S 112
           +
Sbjct: 61  A 61

Length = 92

>gnl|CDD|233881 TIGR02470, sucr_synth, sucrose synthase

 Score = 39.3 bits (92), Expect = 0.001
 Identities = 19/39 (48%), Positives = 27/39 (69%)

Query: 52  IFLNSSLTEAFCIAILEAASCGLLTVSTRVGGVPEVLPD 90
           IF+  +L EAF + +LEA +CGL T +TR GG  E++ D
Sbjct: 646 IFVQPALYEAFGLTVLEAMTCGLPTFATRFGGPLEIIQD 684

This model represents sucrose synthase, an enzyme that, despite its name, generally uses rather produces sucrose. Sucrose plus UDP (or ADP) becomes D-fructose plus UDP-glucose (or ADP-glucose), which is then available for cell wall (or starch) biosynthesis. The enzyme is homologous to sucrose phosphate synthase, which catalyzes the penultimate step in sucrose synthesis. Sucrose synthase is found, so far, exclusively in plants and cyanobacteria [Energy metabolism, Biosynthesis and degradation of polysaccharides]. Length = 784

>gnl|CDD|99993 cd03823, GT1_ExpE7_like, This family is most closely related to the GT1 family of glycosyltransferases

 Score = 38.8 bits (91), Expect = 0.001
 Identities = 34/143 (23%), Positives = 57/143 (39%), Gaps = 21/143 (14%)

Query: 4   KVRFIVGGDGPKRVRLEEMREKHSLQDRVEMLGAVPHAQVRSVLISGHIFLNSSL-TEAF 62
            +  ++ G+G +    EE   +     RVE LGA P  ++        + +  S+  E F
Sbjct: 220 DIELVIVGNGLEL---EEESYELEGDPRVEFLGAYPQEEIDDFYAEIDVLVVPSIWPENF 276

Query: 63  CIAILEAASCGLLTVSTRVGGVPE----------VLPDDMVVLAE-----PDPGDMVLAI 107
            + I EA + G+  +++ +GG+ E            P D   LA       D  D++  +
Sbjct: 277 PLVIREALAAGVPVIASDIGGMAELVRDGVNGLLFPPGDAEDLAAALERLIDDPDLLERL 336

Query: 108 RKAISLLPKIDPQVMHERMKKLY 130
           R  I   P    +   E   KLY
Sbjct: 337 RAGIE--PPRSIEDQAEEYLKLY 357

ExpE7 in Sinorhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucans (exopolysaccharide II). Length = 359

>gnl|CDD|234452 TIGR04063, stp3, PEP-CTERM/exosortase A-associated glycosyltransferase, Daro_2409 family

 Score = 38.4 bits (90), Expect = 0.002
 Identities = 46/154 (29%), Positives = 63/154 (40%), Gaps = 20/154 (12%)

Query: 8   IVGGDGPKRVRLEEMREKHSLQDRVEMLGAVPHAQVRSV--LISGHIF--LNSSLTEAFC 63
           +VGG GP+   L        L DRV   G VPH +V     LI    +  L   LTE   
Sbjct: 249 LVGG-GPQEEALRAQAAALGLADRVVFTGRVPHDEVERYYSLIDVLAYPRLPMRLTELVT 307

Query: 64  -IAILEAASCGLLTVSTRVGGVPEVLPDDM--VVLAEPDP---GDMVLAIRKAISLLPKI 117
            +  LEA + G L  ++ VGG  E++ D    V+    DP      +LA+    +  P++
Sbjct: 308 PLKPLEAMAQGRLVAASDVGGHRELIRDGETGVLFPAGDPAALAAALLALLDNRAQWPEL 367

Query: 118 DPQVMH----ERMKKLYNWHDVAKRTEIVYDRAL 147
                     ER     NW     R + VY R L
Sbjct: 368 RAAARRFVETER-----NWAASVARYQDVYRRLL 396

PEP-CTERM/exosortase is a protein-sorting system associated with exopolysaccharide production. Members of this protein family are group 1 glycosyltransferases (see pfam00534) in which the overwhelming majority occur in species with the EpsH1 form of exosortase (see TIGR03109), and usually co-clustered with the exosortase. A typical member is Daro_2409 from Dechloromonas aromatica RCB. Length = 397

>gnl|CDD|132490 TIGR03449, mycothiol_MshA, D-inositol-3-phosphate glycosyltransferase

 Score = 37.8 bits (88), Expect = 0.003
 Identities = 24/82 (29%), Positives = 39/82 (47%), Gaps = 4/82 (4%)

Query: 8   IVGG-DGPKRVRLE---EMREKHSLQDRVEMLGAVPHAQVRSVLISGHIFLNSSLTEAFC 63
           +VGG  G      +   E+  +  + DRV  L   P  ++  V  +  +    S  E+F 
Sbjct: 257 VVGGPSGSGLATPDALIELAAELGIADRVRFLPPRPPEELVHVYRAADVVAVPSYNESFG 316

Query: 64  IAILEAASCGLLTVSTRVGGVP 85
           +  +EA +CG   V+ RVGG+P
Sbjct: 317 LVAMEAQACGTPVVAARVGGLP 338

Members of this protein family, found exclusively in the Actinobacteria, are MshA, the glycosyltransferase of mycothiol biosynthesis. Mycothiol replaces glutathione in these species. Length = 405

>gnl|CDD|99976 cd03804, GT1_wbaZ_like, This family is most closely related to the GT1 family of glycosyltransferases

 Score = 37.5 bits (88), Expect = 0.004
 Identities = 32/129 (24%), Positives = 47/129 (36%), Gaps = 21/129 (16%)

Query: 5   VRFIVGGDGPKRVRLEEMREKHSLQDRVEMLGAVPHAQVRSVLIS--GHIFLNSSLTEAF 62
            R +V GDGP+  RL            V  LG V   ++R +       +F      E F
Sbjct: 222 KRLVVIGDGPELDRLRAK-----AGPNVTFLGRVSDEELRDLYARARAFLFPA---EEDF 273

Query: 63  CIAILEAASCGLLTVSTRV-----GGVPEVLPDDMV-VLAEPDPGDMVLAIRKAISLLPK 116
            I  +EA + G     T V     GG  E + D +  +L E    + + A  +       
Sbjct: 274 GIVPVEAMASG-----TPVIAYGKGGALETVIDGVTGILFEEQTVESLAAAVERFEKNED 328

Query: 117 IDPQVMHER 125
            DPQ +   
Sbjct: 329 FDPQAIRAH 337

wbaZ in Salmonella enterica has been shown to possess the mannosyl transferase activity. The members of this family are found in certain bacteria and Archaea. Length = 351

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	222
KOG1111	426	consensus N-acetylglucosaminyltransferase complex,	100.0
cd03796	398	GT1_PIG-A_like This family is most closely related	100.0
PRK15427	406	colanic acid biosynthesis glycosyltransferase WcaL	99.95
TIGR03088	374	stp2 sugar transferase, PEP-CTERM/EpsH1 system ass	99.93
PLN02949	463	transferase, transferring glycosyl groups	99.93
PRK15490	578	Vi polysaccharide biosynthesis protein TviE; Provi	99.93
PRK15484	380	lipopolysaccharide 1,2-N-acetylglucosaminetransfer	99.93
TIGR03449	405	mycothiol_MshA UDP-N-acetylglucosamine: 1L-myo-ino	99.92
PLN02871	465	UDP-sulfoquinovose:DAG sulfoquinovosyltransferase	99.92
PRK15179	694	Vi polysaccharide biosynthesis protein TviE; Provi	99.92
TIGR02472	439	sucr_P_syn_N sucrose-phosphate synthase, putative,	99.92
TIGR02918	500	accessory Sec system glycosylation protein GtfA. M	99.92
cd05844	367	GT1_like_7 Glycosyltransferases catalyze the trans	99.92
cd03805	392	GT1_ALG2_like This family is most closely related	99.91
PRK09922	359	UDP-D-galactose:(glucosyl)lipopolysaccharide-1,6-D	99.91
cd03792	372	GT1_Trehalose_phosphorylase Trehalose phosphorylas	99.91
cd03802	335	GT1_AviGT4_like This family is most closely relate	99.91
PRK10307	412	putative glycosyl transferase; Provisional	99.91
TIGR02468	1050	sucrsPsyn_pln sucrose phosphate synthase/possible	99.91
cd03818	396	GT1_ExpC_like This family is most closely related	99.91
cd03813	475	GT1_like_3 This family is most closely related to	99.91
cd04962	371	GT1_like_5 This family is most closely related to	99.91
cd03806	419	GT1_ALG11_like This family is most closely related	99.91
cd04946	407	GT1_AmsK_like This family is most closely related	99.9
cd04951	360	GT1_WbdM_like This family is most closely related	99.9
TIGR02470	784	sucr_synth sucrose synthase. This model represents	99.9
PLN00142	815	sucrose synthase	99.9
cd04955	363	GT1_like_6 This family is most closely related to	99.9
PLN02939	977	transferase, transferring glycosyl groups	99.89
PLN02846	462	digalactosyldiacylglycerol synthase	99.89
cd03821	375	GT1_Bme6_like This family is most closely related	99.89
PRK14098	489	glycogen synthase; Provisional	99.89
TIGR02149	388	glgA_Coryne glycogen synthase, Corynebacterium fam	99.89
PLN02316	1036	synthase/transferase	99.89
cd03800	398	GT1_Sucrose_synthase This family is most closely r	99.89
cd03799	355	GT1_amsK_like This is a family of GT1 glycosyltran	99.88
cd03807	365	GT1_WbnK_like This family is most closely related	99.88
cd03801	374	GT1_YqgM_like This family is most closely related	99.88
PRK00654	466	glgA glycogen synthase; Provisional	99.88
PHA01630	331	putative group 1 glycosyl transferase	99.88
cd04949	372	GT1_gtfA_like This family is most closely related	99.88
cd03798	377	GT1_wlbH_like This family is most closely related	99.88
cd03816	415	GT1_ALG1_like This family is most closely related	99.88
cd03825	365	GT1_wcfI_like This family is most closely related	99.87
cd03795	357	GT1_like_4 This family is most closely related to	99.87
PRK14099	485	glycogen synthase; Provisional	99.87
cd03822	366	GT1_ecORF704_like This family is most closely rela	99.87
PRK10125	405	putative glycosyl transferase; Provisional	99.87
cd03812	358	GT1_CapH_like This family is most closely related	99.87
PLN02501	794	digalactosyldiacylglycerol synthase	99.87
cd03804	351	GT1_wbaZ_like This family is most closely related	99.87
cd03814	364	GT1_like_2 This family is most closely related to	99.87
TIGR03087	397	stp1 sugar transferase, PEP-CTERM/EpsH1 system ass	99.87
TIGR02095	473	glgA glycogen/starch synthases, ADP-glucose type.	99.87
cd03817	374	GT1_UGDG_like This family is most closely related	99.86
cd03808	359	GT1_cap1E_like This family is most closely related	99.86
cd03820	348	GT1_amsD_like This family is most closely related	99.86
PF00534	172	Glycos_transf_1: Glycosyl transferases group 1; In	99.85
PLN02275	371	transferase, transferring glycosyl groups	99.85
PHA01633	335	putative glycosyl transferase group 1	99.85
cd03791	476	GT1_Glycogen_synthase_DULL1_like This family is mo	99.85
cd03819	355	GT1_WavL_like This family is most closely related	99.84
KOG0853	495	consensus Glycosyltransferase [Cell wall/membrane/	99.84
cd03809	365	GT1_mtfB_like This family is most closely related	99.83
cd03794	394	GT1_wbuB_like This family is most closely related	99.83
cd03823	359	GT1_ExpE7_like This family is most closely related	99.83
cd03811	353	GT1_WabH_like This family is most closely related	99.8
cd04950	373	GT1_like_1 Glycosyltransferases catalyze the trans	99.74
TIGR02400	456	trehalose_OtsA alpha,alpha-trehalose-phosphate syn	99.72
COG0438	381	RfaG Glycosyltransferase [Cell envelope biogenesis	99.72
PRK05749	425	3-deoxy-D-manno-octulosonic-acid transferase; Revi	99.71
cd03788	460	GT1_TPS Trehalose-6-Phosphate Synthase (TPS) is a	99.69
KOG1387	465	consensus Glycosyltransferase [Cell wall/membrane/	99.62
cd01635	229	Glycosyltransferase_GTB_type Glycosyltransferases	99.61
PLN03063	797	alpha,alpha-trehalose-phosphate synthase (UDP-form	99.61
PF13692	135	Glyco_trans_1_4: Glycosyl transferases group 1; PD	99.6
cd03793	590	GT1_Glycogen_synthase_GSY2_like Glycogen synthase,	99.59
PRK14501	726	putative bifunctional trehalose-6-phosphate syntha	99.58
TIGR03713	519	acc_sec_asp1 accessory Sec system protein Asp1. Th	99.53
PRK13609	380	diacylglycerol glucosyltransferase; Provisional	99.52
PRK09814	333	beta-1,6-galactofuranosyltransferase; Provisional	99.51
COG0297	487	GlgA Glycogen synthase [Carbohydrate transport and	99.51
PF13524	92	Glyco_trans_1_2: Glycosyl transferases group 1	99.5
PRK13608	391	diacylglycerol glucosyltransferase; Provisional	99.49
TIGR00236	365	wecB UDP-N-acetylglucosamine 2-epimerase. Epimeras	99.45
PLN02605	382	monogalactosyldiacylglycerol synthase	99.44
cd03785	350	GT1_MurG MurG is an N-acetylglucosaminyltransferas	99.39
PRK00726	357	murG undecaprenyldiphospho-muramoylpentapeptide be	99.34
TIGR02398	487	gluc_glyc_Psyn glucosylglycerol-phosphate synthase	99.34
KOG2941	444	consensus Beta-1,4-mannosyltransferase [Posttransl	99.3
TIGR01133	348	murG undecaprenyldiphospho-muramoylpentapeptide be	99.28
PRK00025	380	lpxB lipid-A-disaccharide synthase; Reviewed	99.24
cd03786	363	GT1_UDP-GlcNAc_2-Epimerase Bacterial members of th	99.22
TIGR02919	438	accessory Sec system glycosyltransferase GtfB. Mem	99.2
PLN03064	934	alpha,alpha-trehalose-phosphate synthase (UDP-form	99.13
TIGR02094	601	more_P_ylases alpha-glucan phosphorylases. This fa	98.99
PF05693	633	Glycogen_syn: Glycogen synthase; InterPro: IPR0086	98.81
TIGR00215	385	lpxB lipid-A-disaccharide synthase. Lipid-A precur	98.75
cd04299	778	GT1_Glycogen_Phosphorylase_like This family is mos	98.57
PF13844	468	Glyco_transf_41: Glycosyl transferase family 41; P	98.56
PF00982	474	Glyco_transf_20: Glycosyltransferase family 20; In	98.33
TIGR03568	365	NeuC_NnaA UDP-N-acetyl-D-glucosamine 2-epimerase,	98.11
COG3914	620	Spy Predicted O-linked N-acetylglucosamine transfe	98.1
TIGR01426	392	MGT glycosyltransferase, MGT family. This model de	98.07
COG1519	419	KdtA 3-deoxy-D-manno-octulosonic-acid transferase	98.05
PRK10117	474	trehalose-6-phosphate synthase; Provisional	98.05
COG4641	373	Uncharacterized protein conserved in bacteria [Fun	97.87
TIGR03492	396	conserved hypothetical protein. This protein famil	97.82
cd03784	401	GT1_Gtf_like This family includes the Gtfs, a grou	97.67
PLN02205	854	alpha,alpha-trehalose-phosphate synthase [UDP-form	97.66
PF02350	346	Epimerase_2: UDP-N-acetylglucosamine 2-epimerase;	97.62
KOG3742	692	consensus Glycogen synthase [Carbohydrate transpor	97.61
TIGR03590	279	PseG pseudaminic acid biosynthesis-associated prot	97.53
COG0707	357	MurG UDP-N-acetylglucosamine:LPS N-acetylglucosami	97.52
COG0380	486	OtsA Trehalose-6-phosphate synthase [Carbohydrate	97.47
COG1819	406	Glycosyl transferases, related to UDP-glucuronosyl	97.25
TIGR00661	321	MJ1255 conserved hypothetical protein. This model	96.99
PF13528	318	Glyco_trans_1_3: Glycosyl transferase family 1	96.95
PF04101	167	Glyco_tran_28_C: Glycosyltransferase family 28 C-t	96.95
PHA03392	507	egt ecdysteroid UDP-glucosyltransferase; Provision	96.79
PRK02797	322	4-alpha-L-fucosyltransferase; Provisional	96.79
COG0058	750	GlgP Glucan phosphorylase [Carbohydrate transport	96.78
PRK12446	352	undecaprenyldiphospho-muramoylpentapeptide beta-N-	96.7
PF10087	97	DUF2325: Uncharacterized protein conserved in bact	96.32
COG0381	383	WecB UDP-N-acetylglucosamine 2-epimerase [Cell env	96.3
PF02684	373	LpxB: Lipid-A-disaccharide synthetase; InterPro: I	96.17
PF15024	559	Glyco_transf_18: Glycosyltransferase family 18	96.02
PF00201	500	UDPGT: UDP-glucoronosyl and UDP-glucosyl transfera	95.86
PF07429	360	Glyco_transf_56: 4-alpha-L-fucosyltransferase glyc	95.68
cd03789	279	GT1_LPS_heptosyltransferase Lipopolysaccharide hep	95.52
COG0763	381	LpxB Lipid A disaccharide synthetase [Cell envelop	95.36
PLN02670	472	transferase, transferring glycosyl groups	95.36
TIGR02093	794	P_ylase glycogen/starch/alpha-glucan phosphorylase	95.35
PLN03004	451	UDP-glycosyltransferase	95.33
PLN02410	451	UDP-glucoronosyl/UDP-glucosyl transferase family p	95.3
PLN02562	448	UDP-glycosyltransferase	95.2
PRK14986	815	glycogen phosphorylase; Provisional	95.16
PF00343	713	Phosphorylase: Carbohydrate phosphorylase; InterPr	94.79
PF01113	124	DapB_N: Dihydrodipicolinate reductase, N-terminus;	94.57
cd04300	797	GT1_Glycogen_Phosphorylase This is a family of oli	94.33
PRK14985	798	maltodextrin phosphorylase; Provisional	94.19
PLN02173	449	UDP-glucosyl transferase family protein	94.1
PLN03007	482	UDP-glucosyltransferase family protein	94.03
TIGR02193	319	heptsyl_trn_I lipopolysaccharide heptosyltransfera	93.72
PLN02555	480	limonoid glucosyltransferase	93.65
PLN02448	459	UDP-glycosyltransferase family protein	93.45
PLN02764	453	glycosyltransferase family protein	93.41
PLN02554	481	UDP-glycosyltransferase family protein	93.21
PLN02208	442	glycosyltransferase family protein	93.19
PRK10916	348	ADP-heptose:LPS heptosyltransferase II; Provisiona	92.93
TIGR02201	344	heptsyl_trn_III lipopolysaccharide heptosyltransfe	92.88
PRK10422	352	lipopolysaccharide core biosynthesis protein; Prov	92.75
TIGR02195	334	heptsyl_trn_II lipopolysaccharide heptosyltransfer	92.75
PLN02210	456	UDP-glucosyl transferase	92.62
PLN02863	477	UDP-glucoronosyl/UDP-glucosyl transferase family p	92.6
PLN02207	468	UDP-glycosyltransferase	92.59
PLN00414	446	glycosyltransferase family protein	92.51
PLN02152	455	indole-3-acetate beta-glucosyltransferase	92.48
PF04464	369	Glyphos_transf: CDP-Glycerol:Poly(glycerophosphate	92.42
PF04007	335	DUF354: Protein of unknown function (DUF354); Inte	91.92
PLN02992	481	coniferyl-alcohol glucosyltransferase	91.85
PRK10964	322	ADP-heptose:LPS heptosyl transferase I; Provisiona	91.46
COG4671	400	Predicted glycosyl transferase [General function p	91.16
PRK10017	426	colanic acid biosynthesis protein; Provisional	90.95
PLN02167	475	UDP-glycosyltransferase family protein	90.79
PRK01021	608	lpxB lipid-A-disaccharide synthase; Reviewed	90.07
COG3980	318	spsG Spore coat polysaccharide biosynthesis protei	89.88
COG0859	334	RfaF ADP-heptose:LPS heptosyltransferase [Cell env	89.67
PF01075	247	Glyco_transf_9: Glycosyltransferase family 9 (hept	89.42
KOG4626	966	consensus O-linked N-acetylglucosamine transferase	89.35
PF03016	302	Exostosin: Exostosin family; InterPro: IPR004263 H	87.67
PLN02534	491	UDP-glycosyltransferase	87.51
KOG1021	464	consensus Acetylglucosaminyltransferase EXT1/exost	86.79
PLN00164	480	glucosyltransferase; Provisional	86.54
PF02826	178	2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehy	81.22
PF11071	141	DUF2872: Protein of unknown function (DUF2872); In	80.87
PF06258	311	Mito_fiss_Elm1: Mitochondrial fission ELM1; InterP	80.72
PRK00048	257	dihydrodipicolinate reductase; Provisional	80.64
PRK06718	202	precorrin-2 dehydrogenase; Reviewed	80.03

>KOG1111 consensus N-acetylglucosaminyltransferase complex, subunit PIG-A/SPT14, required for phosphatidylinositol biosynthesis/Sulfolipid synthase [Cell wall/membrane/envelope biogenesis; Posttranslational modification, protein turnover, chaperones; Lipid transport and metabolism]

Probab=100.00  E-value=6.2e-42  Score=283.92  Aligned_cols=200  Identities=58%  Similarity=0.912  Sum_probs=189.6

Q ss_pred             CCCceEEEEEcCCccHHHHHHHHHHcCCCCcEEEeCCCChhHHHHHHHhccEEEEcCCCccccHHHHHHHHhCCcEEEeC
Q 027511            1 MRVKVRFIVGGDGPKRVRLEEMREKHSLQDRVEMLGAVPHAQVRSVLISGHIFLNSSLTEAFCIAILEAASCGLLTVSTR   80 (222)
Q Consensus         1 ~~p~~~lvi~G~g~~~~~l~~~~~~~~l~~~V~~~g~v~~~~~~~ll~~adv~v~~s~~E~~g~~ilEAma~G~PvVa~~   80 (222)
                      ++|+++|+|+||||++..++++.+++.++++|.++|.+++++++++|.+.|+|++||.+|+||++++|||+||+|||+|+
T Consensus       223 ~~p~vrfii~GDGPk~i~lee~lEk~~l~~rV~~lG~v~h~~Vr~vl~~G~IFlntSlTEafc~~ivEAaScGL~VVsTr  302 (426)
T KOG1111|consen  223 KHPEVRFIIIGDGPKRIDLEEMLEKLFLQDRVVMLGTVPHDRVRDVLVRGDIFLNTSLTEAFCMVIVEAASCGLPVVSTR  302 (426)
T ss_pred             cCCCeeEEEecCCcccchHHHHHHHhhccCceEEecccchHHHHHHHhcCcEEeccHHHHHHHHHHHHHHhCCCEEEEee
Confidence            58999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCccccccCCceEEeCCCHHHHHHHHHHHHhcCCCCCHHHHHHHHHhcCCHHHHHHHHHHHHHHHhcCCCccHHHHHHh
Q 027511           81 VGGVPEVLPDDMVVLAEPDPGDMVLAIRKAISLLPKIDPQVMHERMKKLYNWHDVAKRTEIVYDRALECPNQNLVERLSR  160 (222)
Q Consensus        81 ~gg~~e~i~~~~~g~~~~~~~~la~~i~~ll~~~~~~~~~~~~~~~~~~fs~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (222)
                      +||++|+++++...+..++++++++++++++...+.. ..+.++++++.|+|++++++++++|.++......+..+++..
T Consensus       303 VGGIpeVLP~d~i~~~~~~~~dl~~~v~~ai~~~~~~-p~~~h~~v~~~y~w~dVa~rTekvy~r~~~t~~~~~~~r~~~  381 (426)
T KOG1111|consen  303 VGGIPEVLPEDMITLGEPGPDDLVGAVEKAITKLRTL-PLEFHDRVKKMYSWKDVAERTEKVYDRAATTSIRNEQDRLKI  381 (426)
T ss_pred             cCCccccCCccceeccCCChHHHHHHHHHHHHHhccC-chhHHHHHHHhccHHHHHHHHHHHHHHHhhccCcCHHHHHHH
Confidence            9999999999966678889999999999999886522 578899999999999999999999999999999999999998


Q ss_pred             HhhcCchHHHHHHHHHHHHHHHHHHHHHhcCCCCcccCCCCC
Q 027511          161 YLSCGAWAGKLFCLVMIIDYLLWRFLELWKPAEDIEEVPDIV  202 (222)
Q Consensus       161 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~  202 (222)
                      ++..|.+ |+++.++..+.|++++.++|++|+.+++++||+.
T Consensus       382 ~~~~g~~-g~~~~v~~~i~~ll~~Ll~l~~p~~~v~~a~~~~  422 (426)
T KOG1111|consen  382 WLYRGVG-GKLFHVLGPINYLLKRLLELPEPRGNVEIAPDVQ  422 (426)
T ss_pred             HhhccCC-ceEEEEehHHHHHHHHHhcccCcccccccCcccc
Confidence            8888776 8899999999999999999999999999999993

>cd03796 GT1_PIG-A_like This family is most closely related to the GT1 family of glycosyltransferases

Probab=100.00  E-value=1.8e-32  Score=239.69  Aligned_cols=174  Identities=69%  Similarity=1.145  Sum_probs=163.5

Q ss_pred             CCceEEEEEcCCccHHHHHHHHHHcCCCCcEEEeCCCChhHHHHHHHhccEEEEcCCCccccHHHHHHHHhCCcEEEeCC
Q 027511            2 RVKVRFIVGGDGPKRVRLEEMREKHSLQDRVEMLGAVPHAQVRSVLISGHIFLNSSLTEAFCIAILEAASCGLLTVSTRV   81 (222)
Q Consensus         2 ~p~~~lvi~G~g~~~~~l~~~~~~~~l~~~V~~~g~v~~~~~~~ll~~adv~v~~s~~E~~g~~ilEAma~G~PvVa~~~   81 (222)
                      .|+++|+|+|+|+..+.++++++++++.++|.|+|+++++++..+|+.+|++++||..|+||++++|||+||+|||+++.
T Consensus       222 ~~~~~l~i~G~g~~~~~l~~~~~~~~l~~~v~~~G~~~~~~~~~~l~~ad~~v~pS~~E~~g~~~~EAma~G~PVI~s~~  301 (398)
T cd03796         222 HPNVRFIIGGDGPKRILLEEMREKYNLQDRVELLGAVPHERVRDVLVQGHIFLNTSLTEAFCIAIVEAASCGLLVVSTRV  301 (398)
T ss_pred             CCCEEEEEEeCCchHHHHHHHHHHhCCCCeEEEeCCCCHHHHHHHHHhCCEEEeCChhhccCHHHHHHHHcCCCEEECCC
Confidence            58999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCccccccCCceEEeCCCHHHHHHHHHHHHhcCC--CCCHHHHHHHHHhcCCHHHHHHHHHHHHHHHhcCCCccHHHHHH
Q 027511           82 GGVPEVLPDDMVVLAEPDPGDMVLAIRKAISLLP--KIDPQVMHERMKKLYNWHDVAKRTEIVYDRALECPNQNLVERLS  159 (222)
Q Consensus        82 gg~~e~i~~~~~g~~~~~~~~la~~i~~ll~~~~--~~~~~~~~~~~~~~fs~~~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (222)
                      ||.+|++.++..++..+|+++++++|.+++++..  ..+..++++++.+.|||+.+++++.++|+++++.+.....+++.
T Consensus       302 gg~~e~i~~~~~~~~~~~~~~l~~~l~~~l~~~~~~~~~~~~~~~~~~~~fs~~~~~~~~~~~y~~l~~~~~~~~~~~~~  381 (398)
T cd03796         302 GGIPEVLPPDMILLAEPDVESIVRKLEEAISILRTGKHDPWSFHNRVKKMYSWEDVAKRTEKVYDRILQTPNLSLLERLK  381 (398)
T ss_pred             CCchhheeCCceeecCCCHHHHHHHHHHHHhChhhhhhHHHHHHHHHHhhCCHHHHHHHHHHHHHHHhcCCCcchHHhhh
Confidence            9999999988777888899999999999998755  34678888999999999999999999999999888888899999


Q ss_pred             hHhhcCchHHHHHHHH
Q 027511          160 RYLSCGAWAGKLFCLV  175 (222)
Q Consensus       160 ~~~~~g~~~~~~~~~~  175 (222)
                      +||+||+++|++|+++
T Consensus       382 ~~~~~~~~~~~~~~~~  397 (398)
T cd03796         382 RYYSCGPIAGKIFCLL  397 (398)
T ss_pred             hhcccCcccceeEEee
Confidence            9999999999998875

Phosphatidylinositol glycan-class A (PIG-A), an X-linked gene in humans, is necessary for the synthesis of N-acetylglucosaminyl-phosphatidylinositol, a very early intermediate in glycosyl phosphatidylinositol (GPI)-anchor biosynthesis. The GPI-anchor is an important cellular structure that facilitates the attachment of many proteins to cell surfaces. Somatic mutations in PIG-A have been associated with Paroxysmal Nocturnal Hemoglobinuria (PNH), an acquired hematological disorder.

>PRK15427 colanic acid biosynthesis glycosyltransferase WcaL; Provisional

Probab=99.95  E-value=2.2e-27  Score=208.47  Aligned_cols=144  Identities=26%  Similarity=0.347  Sum_probs=134.9

Q ss_pred             CCceEEEEEcCCccHHHHHHHHHHcCCCCcEEEeCCCChhHHHHHHHhccEEEEcCCC------ccccHHHHHHHHhCCc
Q 027511            2 RVKVRFIVGGDGPKRVRLEEMREKHSLQDRVEMLGAVPHAQVRSVLISGHIFLNSSLT------EAFCIAILEAASCGLL   75 (222)
Q Consensus         2 ~p~~~lvi~G~g~~~~~l~~~~~~~~l~~~V~~~g~v~~~~~~~ll~~adv~v~~s~~------E~~g~~ilEAma~G~P   75 (222)
                      .|+++++|+|+|+.+++++++++++++.++|.|+|+++++++.++|+.||++|+||..      |+||++++|||+||+|
T Consensus       251 ~~~~~l~ivG~G~~~~~l~~~~~~~~l~~~V~~~G~~~~~el~~~l~~aDv~v~pS~~~~~g~~Eg~p~~llEAma~G~P  330 (406)
T PRK15427        251 GVAFRYRILGIGPWERRLRTLIEQYQLEDVVEMPGFKPSHEVKAMLDDADVFLLPSVTGADGDMEGIPVALMEAMAVGIP  330 (406)
T ss_pred             CCCEEEEEEECchhHHHHHHHHHHcCCCCeEEEeCCCCHHHHHHHHHhCCEEEECCccCCCCCccCccHHHHHHHhCCCC
Confidence            5789999999999999999999999999999999999999999999999999999984      9999999999999999


Q ss_pred             EEEeCCCCccccccCCceEEeCC--CHHHHHHHHHHHHh-cCC--CCCHHHHHHHHHhcCCHHHHHHHHHHHHHH
Q 027511           76 TVSTRVGGVPEVLPDDMVVLAEP--DPGDMVLAIRKAIS-LLP--KIDPQVMHERMKKLYNWHDVAKRTEIVYDR  145 (222)
Q Consensus        76 vVa~~~gg~~e~i~~~~~g~~~~--~~~~la~~i~~ll~-~~~--~~~~~~~~~~~~~~fs~~~~~~~~~~~~~~  145 (222)
                      ||+|+.||.+|++.++.+|+..+  |+++++++|.++++ +++  ..++.++++++.++|+|+.+++++.++|++
T Consensus       331 VI~t~~~g~~E~v~~~~~G~lv~~~d~~~la~ai~~l~~~d~~~~~~~~~~ar~~v~~~f~~~~~~~~l~~~~~~  405 (406)
T PRK15427        331 VVSTLHSGIPELVEADKSGWLVPENDAQALAQRLAAFSQLDTDELAPVVKRAREKVETDFNQQVINRELASLLQA  405 (406)
T ss_pred             EEEeCCCCchhhhcCCCceEEeCCCCHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhh
Confidence            99999999999999998875443  89999999999999 776  678999999999999999999999999975

>TIGR03088 stp2 sugar transferase, PEP-CTERM/EpsH1 system associated

Probab=99.93  E-value=1.1e-25  Score=194.67  Aligned_cols=142  Identities=24%  Similarity=0.349  Sum_probs=130.7

Q ss_pred             CceEEEEEcCCccHHHHHHHHHHcCCCCcEEEeCCCChhHHHHHHHhccEEEEcCCCccccHHHHHHHHhCCcEEEeCCC
Q 027511            3 VKVRFIVGGDGPKRVRLEEMREKHSLQDRVEMLGAVPHAQVRSVLISGHIFLNSSLTEAFCIAILEAASCGLLTVSTRVG   82 (222)
Q Consensus         3 p~~~lvi~G~g~~~~~l~~~~~~~~l~~~V~~~g~v~~~~~~~ll~~adv~v~~s~~E~~g~~ilEAma~G~PvVa~~~g   82 (222)
                      |+++|+++|+|+.++++++.++++++.++|.|+|.  .+++..+|+++|++|+||..|+||++++|||+||+|||+++.|
T Consensus       228 ~~~~l~i~G~g~~~~~~~~~~~~~~~~~~v~~~g~--~~~~~~~~~~adi~v~pS~~Eg~~~~~lEAma~G~Pvv~s~~~  305 (374)
T TIGR03088       228 ERLRLVIVGDGPARGACEQMVRAAGLAHLVWLPGE--RDDVPALMQALDLFVLPSLAEGISNTILEAMASGLPVIATAVG  305 (374)
T ss_pred             cceEEEEecCCchHHHHHHHHHHcCCcceEEEcCC--cCCHHHHHHhcCEEEeccccccCchHHHHHHHcCCCEEEcCCC
Confidence            47999999999999999999999999999999996  5789999999999999999999999999999999999999999


Q ss_pred             CccccccCCceEEeC--CCHHHHHHHHHHHHhcCC--CCCHHHHHHHHHhcCCHHHHHHHHHHHHHHH
Q 027511           83 GVPEVLPDDMVVLAE--PDPGDMVLAIRKAISLLP--KIDPQVMHERMKKLYNWHDVAKRTEIVYDRA  146 (222)
Q Consensus        83 g~~e~i~~~~~g~~~--~~~~~la~~i~~ll~~~~--~~~~~~~~~~~~~~fs~~~~~~~~~~~~~~~  146 (222)
                      |.+|++.++.+|+..  .|+++++++|.+++++++  ..++.++++.+.++|+|+.+++++.++|+++
T Consensus       306 g~~e~i~~~~~g~~~~~~d~~~la~~i~~l~~~~~~~~~~~~~a~~~~~~~fs~~~~~~~~~~~y~~~  373 (374)
T TIGR03088       306 GNPELVQHGVTGALVPPGDAVALARALQPYVSDPAARRAHGAAGRARAEQQFSINAMVAAYAGLYDQL  373 (374)
T ss_pred             CcHHHhcCCCceEEeCCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHh
Confidence            999999998776543  389999999999998866  5677888999999999999999999999876

Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate.

>PLN02949 transferase, transferring glycosyl groups

Probab=99.93  E-value=2.7e-25  Score=197.63  Aligned_cols=147  Identities=14%  Similarity=0.151  Sum_probs=130.2

Q ss_pred             CCceEEEEEcCCcc------HHHHHHHHHHcCCCCcEEEeCCCChhHHHHHHHhccEEEEcCCCccccHHHHHHHHhCCc
Q 027511            2 RVKVRFIVGGDGPK------RVRLEEMREKHSLQDRVEMLGAVPHAQVRSVLISGHIFLNSSLTEAFCIAILEAASCGLL   75 (222)
Q Consensus         2 ~p~~~lvi~G~g~~------~~~l~~~~~~~~l~~~V~~~g~v~~~~~~~ll~~adv~v~~s~~E~~g~~ilEAma~G~P   75 (222)
                      .|+++|+|+|+++.      .+++++++++++++++|.|+|+++.+++..+|++|+++++||..|+||++++|||+||+|
T Consensus       301 ~~~~~LvIvG~~~~~~~~~~~~eL~~la~~l~L~~~V~f~g~v~~~el~~ll~~a~~~v~~s~~E~FGivvlEAMA~G~P  380 (463)
T PLN02949        301 VPRPKLQFVGSCRNKEDEERLQKLKDRAKELGLDGDVEFHKNVSYRDLVRLLGGAVAGLHSMIDEHFGISVVEYMAAGAV  380 (463)
T ss_pred             CCCcEEEEEeCCCCcccHHHHHHHHHHHHHcCCCCcEEEeCCCCHHHHHHHHHhCcEEEeCCccCCCChHHHHHHHcCCc
Confidence            47899999998742      257888999999999999999999999999999999999999999999999999999999


Q ss_pred             EEEeCCCCcc-ccccC---CceEEeCCCHHHHHHHHHHHHhcC-C--CCCHHHHHHHHHhcCCHHHHHHHHHHHHHHHhc
Q 027511           76 TVSTRVGGVP-EVLPD---DMVVLAEPDPGDMVLAIRKAISLL-P--KIDPQVMHERMKKLYNWHDVAKRTEIVYDRALE  148 (222)
Q Consensus        76 vVa~~~gg~~-e~i~~---~~~g~~~~~~~~la~~i~~ll~~~-~--~~~~~~~~~~~~~~fs~~~~~~~~~~~~~~~~~  148 (222)
                      ||+++.||+. |++.+   +.+|+..+|+++++++|.++++++ +  ..++.++++++ ++|||+.+.+++.+.|+++++
T Consensus       381 VIa~~~gGp~~eIV~~~~~g~tG~l~~~~~~la~ai~~ll~~~~~~r~~m~~~ar~~~-~~FS~e~~~~~~~~~i~~l~~  459 (463)
T PLN02949        381 PIAHNSAGPKMDIVLDEDGQQTGFLATTVEEYADAILEVLRMRETERLEIAAAARKRA-NRFSEQRFNEDFKDAIRPILN  459 (463)
T ss_pred             EEEeCCCCCcceeeecCCCCcccccCCCHHHHHHHHHHHHhCCHHHHHHHHHHHHHHH-HHcCHHHHHHHHHHHHHHHHh
Confidence            9999999975 67665   557888889999999999999853 3  56788888888 569999999999999998876


Q ss_pred             C
Q 027511          149 C  149 (222)
Q Consensus       149 ~  149 (222)
                      +
T Consensus       460 ~  460 (463)
T PLN02949        460 S  460 (463)
T ss_pred             h
Confidence            4

>PRK15490 Vi polysaccharide biosynthesis protein TviE; Provisional

Probab=99.93  E-value=2e-25  Score=198.69  Aligned_cols=142  Identities=20%  Similarity=0.228  Sum_probs=125.5

Q ss_pred             CCceEEEEEcCCccHHHHHHHHHHcCCCCcEEEeCCCChhHHHHHHHhccEEEEcCCCccccHHHHHHHHhCCcEEEeCC
Q 027511            2 RVKVRFIVGGDGPKRVRLEEMREKHSLQDRVEMLGAVPHAQVRSVLISGHIFLNSSLTEAFCIAILEAASCGLLTVSTRV   81 (222)
Q Consensus         2 ~p~~~lvi~G~g~~~~~l~~~~~~~~l~~~V~~~g~v~~~~~~~ll~~adv~v~~s~~E~~g~~ilEAma~G~PvVa~~~   81 (222)
                      .|+++|+|+|+|+.+++++++++++++.++|.|+|+  .+++..+|+.+|+||+||.+|+||++++|||+||+|||+++.
T Consensus       427 ~pdirLvIVGdG~~~eeLk~la~elgL~d~V~FlG~--~~Dv~~~LaaADVfVlPS~~EGfp~vlLEAMA~GlPVVATdv  504 (578)
T PRK15490        427 HPATRFVLVGDGDLRAEAQKRAEQLGILERILFVGA--SRDVGYWLQKMNVFILFSRYEGLPNVLIEAQMVGVPVISTPA  504 (578)
T ss_pred             CCCeEEEEEeCchhHHHHHHHHHHcCCCCcEEECCC--hhhHHHHHHhCCEEEEcccccCccHHHHHHHHhCCCEEEeCC
Confidence            589999999999999999999999999999999999  478999999999999999999999999999999999999999


Q ss_pred             CCccccccCCceEEeCC--CHHHHHHHHH---HHHhcCC--CCCHHHHHHHHHhcCCHHHHHHHHHHHHHH
Q 027511           82 GGVPEVLPDDMVVLAEP--DPGDMVLAIR---KAISLLP--KIDPQVMHERMKKLYNWHDVAKRTEIVYDR  145 (222)
Q Consensus        82 gg~~e~i~~~~~g~~~~--~~~~la~~i~---~ll~~~~--~~~~~~~~~~~~~~fs~~~~~~~~~~~~~~  145 (222)
                      ||.+|++.++.+|+..+  |++++++++.   .+.+...  ..++.++++++.++|||+.++++|.++|.+
T Consensus       505 GG~~EiV~dG~nG~LVp~~D~~aLa~ai~lA~aL~~ll~~~~~mg~~ARe~V~e~FS~e~Mv~~y~ki~~~  575 (578)
T PRK15490        505 GGSAECFIEGVSGFILDDAQTVNLDQACRYAEKLVNLWRSRTGICQQTQSFLQERFTVEHMVGTFVKTIAS  575 (578)
T ss_pred             CCcHHHcccCCcEEEECCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHh
Confidence            99999999998887644  6677777663   3333333  346788999999999999999999999975

>PRK15484 lipopolysaccharide 1,2-N-acetylglucosaminetransferase; Provisional

Probab=99.93  E-value=5.8e-25  Score=191.51  Aligned_cols=144  Identities=20%  Similarity=0.358  Sum_probs=126.4

Q ss_pred             CCceEEEEEcCCccH---------HHHHHHHHHcCCCCcEEEeCCCChhHHHHHHHhccEEEEcCC-CccccHHHHHHHH
Q 027511            2 RVKVRFIVGGDGPKR---------VRLEEMREKHSLQDRVEMLGAVPHAQVRSVLISGHIFLNSSL-TEAFCIAILEAAS   71 (222)
Q Consensus         2 ~p~~~lvi~G~g~~~---------~~l~~~~~~~~l~~~V~~~g~v~~~~~~~ll~~adv~v~~s~-~E~~g~~ilEAma   71 (222)
                      +|+++|+|+|+|+..         +++++++++++  ++|.|+|+++.+++..+|+.||++|+||. .|+||++++|||+
T Consensus       222 ~p~~~lvivG~g~~~~~~~~~~~~~~l~~~~~~l~--~~v~~~G~~~~~~l~~~~~~aDv~v~pS~~~E~f~~~~lEAma  299 (380)
T PRK15484        222 HSNLKLVVVGDPTASSKGEKAAYQKKVLEAAKRIG--DRCIMLGGQPPEKMHNYYPLADLVVVPSQVEEAFCMVAVEAMA  299 (380)
T ss_pred             CCCeEEEEEeCCccccccchhHHHHHHHHHHHhcC--CcEEEeCCCCHHHHHHHHHhCCEEEeCCCCccccccHHHHHHH
Confidence            689999999987532         24555555554  57999999999999999999999999997 5999999999999


Q ss_pred             hCCcEEEeCCCCccccccCCceEE-e-CC-CHHHHHHHHHHHHhcCC-CCCHHHHHHHHHhcCCHHHHHHHHHHHHHHHh
Q 027511           72 CGLLTVSTRVGGVPEVLPDDMVVL-A-EP-DPGDMVLAIRKAISLLP-KIDPQVMHERMKKLYNWHDVAKRTEIVYDRAL  147 (222)
Q Consensus        72 ~G~PvVa~~~gg~~e~i~~~~~g~-~-~~-~~~~la~~i~~ll~~~~-~~~~~~~~~~~~~~fs~~~~~~~~~~~~~~~~  147 (222)
                      ||+|||+++.||.+|++.++.+|+ . .+ |+++++++|.+++++++ ..++.++++.+.++|+|+.++++++++|++..
T Consensus       300 ~G~PVI~s~~gg~~Eiv~~~~~G~~l~~~~d~~~la~~I~~ll~d~~~~~~~~~ar~~~~~~fsw~~~a~~~~~~l~~~~  379 (380)
T PRK15484        300 AGKPVLASTKGGITEFVLEGITGYHLAEPMTSDSIISDINRTLADPELTQIAEQAKDFVFSKYSWEGVTQRFEEQIHNWF  379 (380)
T ss_pred             cCCCEEEeCCCCcHhhcccCCceEEEeCCCCHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHhc
Confidence            999999999999999999998875 3 33 89999999999999877 66888899999999999999999999998754

>TIGR03449 mycothiol_MshA UDP-N-acetylglucosamine: 1L-myo-inositol-1-phosphate 1-alpha-D-N-acetylglucosaminyltransferase

Probab=99.92  E-value=1.6e-24  Score=189.49  Aligned_cols=146  Identities=26%  Similarity=0.362  Sum_probs=129.8

Q ss_pred             CCc--eEEEEEcC----C-ccHHHHHHHHHHcCCCCcEEEeCCCChhHHHHHHHhccEEEEcCCCccccHHHHHHHHhCC
Q 027511            2 RVK--VRFIVGGD----G-PKRVRLEEMREKHSLQDRVEMLGAVPHAQVRSVLISGHIFLNSSLTEAFCIAILEAASCGL   74 (222)
Q Consensus         2 ~p~--~~lvi~G~----g-~~~~~l~~~~~~~~l~~~V~~~g~v~~~~~~~ll~~adv~v~~s~~E~~g~~ilEAma~G~   74 (222)
                      +|+  ++|+|+|+    | +..++++++++++++.++|.|+|+++++++..+|+.||++++||..|+||++++|||++|+
T Consensus       248 ~~~~~~~l~ivG~~~~~g~~~~~~l~~~~~~~~l~~~v~~~g~~~~~~~~~~l~~ad~~v~ps~~E~~g~~~lEAma~G~  327 (405)
T TIGR03449       248 DPDRNLRVIVVGGPSGSGLATPDALIELAAELGIADRVRFLPPRPPEELVHVYRAADVVAVPSYNESFGLVAMEAQACGT  327 (405)
T ss_pred             CCCcceEEEEEeCCCCCcchHHHHHHHHHHHcCCCceEEECCCCCHHHHHHHHHhCCEEEECCCCCCcChHHHHHHHcCC
Confidence            355  89999995    4 5567899999999999999999999999999999999999999999999999999999999


Q ss_pred             cEEEeCCCCccccccCCceEEeCC--CHHHHHHHHHHHHhcCC--CCCHHHHHHHHHhcCCHHHHHHHHHHHHHHHhc
Q 027511           75 LTVSTRVGGVPEVLPDDMVVLAEP--DPGDMVLAIRKAISLLP--KIDPQVMHERMKKLYNWHDVAKRTEIVYDRALE  148 (222)
Q Consensus        75 PvVa~~~gg~~e~i~~~~~g~~~~--~~~~la~~i~~ll~~~~--~~~~~~~~~~~~~~fs~~~~~~~~~~~~~~~~~  148 (222)
                      |||+++.||.+|++.++.+|+..+  |+++++++|.+++++++  ..++.++++.+ ++|||+.+++++.++|.+++.
T Consensus       328 Pvi~~~~~~~~e~i~~~~~g~~~~~~d~~~la~~i~~~l~~~~~~~~~~~~~~~~~-~~fsw~~~~~~~~~~y~~~~~  404 (405)
T TIGR03449       328 PVVAARVGGLPVAVADGETGLLVDGHDPADWADALARLLDDPRTRIRMGAAAVEHA-AGFSWAATADGLLSSYRDALA  404 (405)
T ss_pred             CEEEecCCCcHhhhccCCceEECCCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHH-HhCCHHHHHHHHHHHHHHHhh
Confidence            999999999999999988776543  89999999999998866  55666777665 679999999999999998763

Members of this protein family, found exclusively in the Actinobacteria, are MshA, the glycosyltransferase of mycothiol biosynthesis. Mycothiol replaces glutathione in these species.

>PLN02871 UDP-sulfoquinovose:DAG sulfoquinovosyltransferase

Probab=99.92  E-value=9.8e-25  Score=194.70  Aligned_cols=144  Identities=22%  Similarity=0.360  Sum_probs=128.9

Q ss_pred             CCceEEEEEcCCccHHHHHHHHHHcCCCCcEEEeCCCChhHHHHHHHhccEEEEcCCCccccHHHHHHHHhCCcEEEeCC
Q 027511            2 RVKVRFIVGGDGPKRVRLEEMREKHSLQDRVEMLGAVPHAQVRSVLISGHIFLNSSLTEAFCIAILEAASCGLLTVSTRV   81 (222)
Q Consensus         2 ~p~~~lvi~G~g~~~~~l~~~~~~~~l~~~V~~~g~v~~~~~~~ll~~adv~v~~s~~E~~g~~ilEAma~G~PvVa~~~   81 (222)
                      .|+++|+|+|+|+.+++++++++.    .+|.|+|+++++++..+|+.||++|+||..|+||++++|||+||+|||+++.
T Consensus       288 ~~~~~l~ivG~G~~~~~l~~~~~~----~~V~f~G~v~~~ev~~~~~~aDv~V~pS~~E~~g~~vlEAmA~G~PVI~s~~  363 (465)
T PLN02871        288 LPGARLAFVGDGPYREELEKMFAG----TPTVFTGMLQGDELSQAYASGDVFVMPSESETLGFVVLEAMASGVPVVAARA  363 (465)
T ss_pred             CCCcEEEEEeCChHHHHHHHHhcc----CCeEEeccCCHHHHHHHHHHCCEEEECCcccccCcHHHHHHHcCCCEEEcCC
Confidence            478999999999999888888764    3699999999999999999999999999999999999999999999999999


Q ss_pred             CCccccccC---CceEEeC--CCHHHHHHHHHHHHhcCC--CCCHHHHHHHHHhcCCHHHHHHHHHH-HHHHHhcCC
Q 027511           82 GGVPEVLPD---DMVVLAE--PDPGDMVLAIRKAISLLP--KIDPQVMHERMKKLYNWHDVAKRTEI-VYDRALECP  150 (222)
Q Consensus        82 gg~~e~i~~---~~~g~~~--~~~~~la~~i~~ll~~~~--~~~~~~~~~~~~~~fs~~~~~~~~~~-~~~~~~~~~  150 (222)
                      ||..|++.+   +.+|+..  .|+++++++|.++++++.  ..++.++++.+ +.|+|+.+++++.+ +|+.++...
T Consensus       364 gg~~eiv~~~~~~~~G~lv~~~d~~~la~~i~~ll~~~~~~~~~~~~a~~~~-~~fsw~~~a~~l~~~~Y~~~~~~~  439 (465)
T PLN02871        364 GGIPDIIPPDQEGKTGFLYTPGDVDDCVEKLETLLADPELRERMGAAAREEV-EKWDWRAATRKLRNEQYSAAIWFW  439 (465)
T ss_pred             CCcHhhhhcCCCCCceEEeCCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHH-HhCCHHHHHHHHHHHHHHHHHHHH
Confidence            999999998   7777653  389999999999999876  56777888776 57999999999998 799988753

>PRK15179 Vi polysaccharide biosynthesis protein TviE; Provisional

Probab=99.92  E-value=2e-24  Score=199.01  Aligned_cols=141  Identities=22%  Similarity=0.280  Sum_probs=128.5

Q ss_pred             CCceEEEEEcCCccHHHHHHHHHHcCCCCcEEEeCCCChhHHHHHHHhccEEEEcCCCccccHHHHHHHHhCCcEEEeCC
Q 027511            2 RVKVRFIVGGDGPKRVRLEEMREKHSLQDRVEMLGAVPHAQVRSVLISGHIFLNSSLTEAFCIAILEAASCGLLTVSTRV   81 (222)
Q Consensus         2 ~p~~~lvi~G~g~~~~~l~~~~~~~~l~~~V~~~g~v~~~~~~~ll~~adv~v~~s~~E~~g~~ilEAma~G~PvVa~~~   81 (222)
                      +|+++|+|+|+|+.++.++++++++++.++|.|+|+.  +++..+|+.+|++|+||.+|+||++++|||+||+|||+|+.
T Consensus       546 ~p~~~LvIvG~G~~~~~L~~l~~~lgL~~~V~flG~~--~dv~~ll~aaDv~VlpS~~Egfp~vlLEAMA~G~PVVat~~  623 (694)
T PRK15179        546 HPKVRFIMVGGGPLLESVREFAQRLGMGERILFTGLS--RRVGYWLTQFNAFLLLSRFEGLPNVLIEAQFSGVPVVTTLA  623 (694)
T ss_pred             CcCeEEEEEccCcchHHHHHHHHHcCCCCcEEEcCCc--chHHHHHHhcCEEEeccccccchHHHHHHHHcCCeEEEECC
Confidence            6899999999999999999999999999999999996  57999999999999999999999999999999999999999


Q ss_pred             CCccccccCCceEEeCC--C--HHHHHHHHHHHHhcCC--CCCHHHHHHHHHhcCCHHHHHHHHHHHHH
Q 027511           82 GGVPEVLPDDMVVLAEP--D--PGDMVLAIRKAISLLP--KIDPQVMHERMKKLYNWHDVAKRTEIVYD  144 (222)
Q Consensus        82 gg~~e~i~~~~~g~~~~--~--~~~la~~i~~ll~~~~--~~~~~~~~~~~~~~fs~~~~~~~~~~~~~  144 (222)
                      ||++|++.++.+|+..+  |  +++++++|.+++.+..  ..+..++++++.++|||+.+++++.++|+
T Consensus       624 gG~~EiV~dg~~GlLv~~~d~~~~~La~aL~~ll~~l~~~~~l~~~ar~~a~~~FS~~~~~~~~~~lY~  692 (694)
T PRK15179        624 GGAGEAVQEGVTGLTLPADTVTAPDVAEALARIHDMCAADPGIARKAADWASARFSLNQMIASTVRCYQ  692 (694)
T ss_pred             CChHHHccCCCCEEEeCCCCCChHHHHHHHHHHHhChhccHHHHHHHHHHHHHhCCHHHHHHHHHHHhC
Confidence            99999999998886544  4  4689999999887654  45677888899999999999999999995

>TIGR02472 sucr_P_syn_N sucrose-phosphate synthase, putative, glycosyltransferase domain

Probab=99.92  E-value=1.7e-24  Score=191.84  Aligned_cols=136  Identities=23%  Similarity=0.295  Sum_probs=120.8

Q ss_pred             EEEcCCccHH-----------HHHHHHHHcCCCCcEEEeCCCChhHHHHHHHhc----cEEEEcCCCccccHHHHHHHHh
Q 027511            8 IVGGDGPKRV-----------RLEEMREKHSLQDRVEMLGAVPHAQVRSVLISG----HIFLNSSLTEAFCIAILEAASC   72 (222)
Q Consensus         8 vi~G~g~~~~-----------~l~~~~~~~~l~~~V~~~g~v~~~~~~~ll~~a----dv~v~~s~~E~~g~~ilEAma~   72 (222)
                      +|+|+|+...           .+.++++++++.++|.|+|+++.+++..+|+.|    |+||+||..|+||++++|||||
T Consensus       284 li~G~g~~~~~l~~~~~~~~~~~~~~~~~~~l~~~V~f~g~~~~~~~~~~~~~a~~~~Dv~v~pS~~E~fg~~~lEAma~  363 (439)
T TIGR02472       284 LVLGCRDDIRKMESQQREVLQKVLLLIDRYDLYGKVAYPKHHRPDDVPELYRLAARSRGIFVNPALTEPFGLTLLEAAAC  363 (439)
T ss_pred             EEeCCccccccccHHHHHHHHHHHHHHHHcCCCceEEecCCCCHHHHHHHHHHHhhcCCEEecccccCCcccHHHHHHHh
Confidence            3678876532           245567888999999999999999999999987    9999999999999999999999


Q ss_pred             CCcEEEeCCCCccccccCCceEEeC--CCHHHHHHHHHHHHhcCC--CCCHHHHHHHHHhcCCHHHHHHHHHHHH
Q 027511           73 GLLTVSTRVGGVPEVLPDDMVVLAE--PDPGDMVLAIRKAISLLP--KIDPQVMHERMKKLYNWHDVAKRTEIVY  143 (222)
Q Consensus        73 G~PvVa~~~gg~~e~i~~~~~g~~~--~~~~~la~~i~~ll~~~~--~~~~~~~~~~~~~~fs~~~~~~~~~~~~  143 (222)
                      |+|||+|+.||++|++.++.+|+..  .|+++++++|.++++++.  ..++.++++++.++|||+.+++++.+++
T Consensus       364 G~PvV~s~~gg~~eiv~~~~~G~lv~~~d~~~la~~i~~ll~~~~~~~~~~~~a~~~~~~~fsw~~~~~~~~~l~  438 (439)
T TIGR02472       364 GLPIVATDDGGPRDIIANCRNGLLVDVLDLEAIASALEDALSDSSQWQLWSRNGIEGVRRHYSWDAHVEKYLRIL  438 (439)
T ss_pred             CCCEEEeCCCCcHHHhcCCCcEEEeCCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHh
Confidence            9999999999999999998777643  389999999999999876  6788999999999999999999999876

This family consists of the N-terminal regions, or in some cases the entirety, of bacterial proteins closely related to plant sucrose-phosphate synthases (SPS). The C-terminal domain (TIGR02471), found with most members of this family, resembles both bona fide plant sucrose-phosphate phosphatases (SPP) and the SPP-like domain of plant SPS. At least two members of this family lack the SPP-like domain, which may have binding or regulatory rather than enzymatic activity by analogy to plant SPS. This enzyme produces sucrose 6-phosphate and UDP from UDP-glucose and D-fructose 6-phosphate, and may be encoded near the gene for fructokinase.

>TIGR02918 accessory Sec system glycosylation protein GtfA

Probab=99.92  E-value=1.9e-24  Score=193.89  Aligned_cols=140  Identities=16%  Similarity=0.241  Sum_probs=124.1

Q ss_pred             CCceEEEEEcCCccHHHHHHHHHHcCCCCcEEEeCCCChhHHHHHHHhccEEEEcCCCccccHHHHHHHHhCCcEEEeCC
Q 027511            2 RVKVRFIVGGDGPKRVRLEEMREKHSLQDRVEMLGAVPHAQVRSVLISGHIFLNSSLTEAFCIAILEAASCGLLTVSTRV   81 (222)
Q Consensus         2 ~p~~~lvi~G~g~~~~~l~~~~~~~~l~~~V~~~g~v~~~~~~~ll~~adv~v~~s~~E~~g~~ilEAma~G~PvVa~~~   81 (222)
                      .|+++|+|+|+|+..+.++++++++++.++|.|+|..   ++..+++.||++|+||..|+||++++||||||+|||++++
T Consensus       348 ~p~~~l~i~G~G~~~~~l~~~i~~~~l~~~V~f~G~~---~~~~~~~~adv~v~pS~~Egfgl~~lEAma~G~PVI~~dv  424 (500)
T TIGR02918       348 VPELTFDIYGEGGEKQKLQKIINENQAQDYIHLKGHR---NLSEVYKDYELYLSASTSEGFGLTLMEAVGSGLGMIGFDV  424 (500)
T ss_pred             CCCeEEEEEECchhHHHHHHHHHHcCCCCeEEEcCCC---CHHHHHHhCCEEEEcCccccccHHHHHHHHhCCCEEEecC
Confidence            6899999999999999999999999999999999974   6889999999999999999999999999999999999998


Q ss_pred             C-CccccccCCceEEeCC------C----HHHHHHHHHHHHhcCC-CCCHHHHHHHHHhcCCHHHHHHHHHHHHHH
Q 027511           82 G-GVPEVLPDDMVVLAEP------D----PGDMVLAIRKAISLLP-KIDPQVMHERMKKLYNWHDVAKRTEIVYDR  145 (222)
Q Consensus        82 g-g~~e~i~~~~~g~~~~------~----~~~la~~i~~ll~~~~-~~~~~~~~~~~~~~fs~~~~~~~~~~~~~~  145 (222)
                      + |.+|++.++.+|+..+      |    +++++++|.+++++.. ..++.++++. .+.|||+.+++++.+++++
T Consensus       425 ~~G~~eiI~~g~nG~lv~~~~~~~d~~~~~~~la~~I~~ll~~~~~~~~~~~a~~~-a~~fs~~~v~~~w~~ll~~  499 (500)
T TIGR02918       425 NYGNPTFIEDNKNGYLIPIDEEEDDEDQIITALAEKIVEYFNSNDIDAFHEYSYQI-AEGFLTANIIEKWKKLVRE  499 (500)
T ss_pred             CCCCHHHccCCCCEEEEeCCccccchhHHHHHHHHHHHHHhChHHHHHHHHHHHHH-HHhcCHHHHHHHHHHHHhh
Confidence            6 8999999998886543      2    7889999999995333 5667777764 5779999999999999875

Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus. Members are associated with glycosylation of serine-rich glycoproteins exported by the accessory Sec system.

>cd05844 GT1_like_7 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds

Probab=99.92  E-value=3.2e-24  Score=184.31  Aligned_cols=140  Identities=29%  Similarity=0.452  Sum_probs=128.6

Q ss_pred             CCceEEEEEcCCccHHHHHHHHHHcCCCCcEEEeCCCChhHHHHHHHhccEEEEcCC------CccccHHHHHHHHhCCc
Q 027511            2 RVKVRFIVGGDGPKRVRLEEMREKHSLQDRVEMLGAVPHAQVRSVLISGHIFLNSSL------TEAFCIAILEAASCGLL   75 (222)
Q Consensus         2 ~p~~~lvi~G~g~~~~~l~~~~~~~~l~~~V~~~g~v~~~~~~~ll~~adv~v~~s~------~E~~g~~ilEAma~G~P   75 (222)
                      .|+++|+|+|+|+..++++++++++++.++|.|+|.++++++..+|+.+|++++||.      .|+||++++|||+||+|
T Consensus       217 ~~~~~l~ivG~g~~~~~~~~~~~~~~~~~~v~~~g~~~~~~l~~~~~~ad~~v~ps~~~~~~~~E~~~~~~~EA~a~G~P  296 (367)
T cd05844         217 VPEVRLVIIGDGPLLAALEALARALGLGGRVTFLGAQPHAEVRELMRRARIFLQPSVTAPSGDAEGLPVVLLEAQASGVP  296 (367)
T ss_pred             CCCeEEEEEeCchHHHHHHHHHHHcCCCCeEEECCCCCHHHHHHHHHhCCEEEECcccCCCCCccCCchHHHHHHHcCCC
Confidence            579999999999988999999999999999999999999999999999999999997      59999999999999999


Q ss_pred             EEEeCCCCccccccCCceEEeC--CCHHHHHHHHHHHHhcCC--CCCHHHHHHHHHhcCCHHHHHHHHHH
Q 027511           76 TVSTRVGGVPEVLPDDMVVLAE--PDPGDMVLAIRKAISLLP--KIDPQVMHERMKKLYNWHDVAKRTEI  141 (222)
Q Consensus        76 vVa~~~gg~~e~i~~~~~g~~~--~~~~~la~~i~~ll~~~~--~~~~~~~~~~~~~~fs~~~~~~~~~~  141 (222)
                      ||+++.++..|++.++.+|+..  .|+++++++|.+++++++  ..++.++++.+.+.|||+.+++++.+
T Consensus       297 vI~s~~~~~~e~i~~~~~g~~~~~~d~~~l~~~i~~l~~~~~~~~~~~~~a~~~~~~~~s~~~~~~~l~~  366 (367)
T cd05844         297 VVATRHGGIPEAVEDGETGLLVPEGDVAALAAALGRLLADPDLRARMGAAGRRRVEERFDLRRQTAKLEA  366 (367)
T ss_pred             EEEeCCCCchhheecCCeeEEECCCCHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHCCHHHHHHHHhc
Confidence            9999999999999988777554  389999999999999876  56778889999999999999999875

The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center

>cd03805 GT1_ALG2_like This family is most closely related to the GT1 family of glycosyltransferases

Probab=99.91  E-value=4.3e-24  Score=185.48  Aligned_cols=137  Identities=25%  Similarity=0.312  Sum_probs=125.8

Q ss_pred             CceEEEEEcCCccH--------HHHHHHHHH-cCCCCcEEEeCCCChhHHHHHHHhccEEEEcCCCccccHHHHHHHHhC
Q 027511            3 VKVRFIVGGDGPKR--------VRLEEMREK-HSLQDRVEMLGAVPHAQVRSVLISGHIFLNSSLTEAFCIAILEAASCG   73 (222)
Q Consensus         3 p~~~lvi~G~g~~~--------~~l~~~~~~-~~l~~~V~~~g~v~~~~~~~ll~~adv~v~~s~~E~~g~~ilEAma~G   73 (222)
                      |+++|+++|+|+.+        +++++++++ +++.++|.|+|+++.+++..+|+.||++++||..|+||++++|||+||
T Consensus       244 ~~~~l~i~G~~~~~~~~~~~~~~~l~~~~~~~~~l~~~V~f~g~~~~~~~~~~l~~ad~~l~~s~~E~~g~~~lEAma~G  323 (392)
T cd03805         244 KNVRLVIAGGYDPRVAENVEYLEELQRLAEELLLLEDQVIFLPSISDSQKELLLSSARALLYTPSNEHFGIVPLEAMYAG  323 (392)
T ss_pred             cCeEEEEEcCCCCCCchhHHHHHHHHHHHHHhcCCCceEEEeCCCChHHHHHHHhhCeEEEECCCcCCCCchHHHHHHcC
Confidence            79999999998753        788888998 899999999999999999999999999999999999999999999999


Q ss_pred             CcEEEeCCCCccccccCCceEE-eCCCHHHHHHHHHHHHhcCC--CCCHHHHHHHHHhcCCHHHHHHHH
Q 027511           74 LLTVSTRVGGVPEVLPDDMVVL-AEPDPGDMVLAIRKAISLLP--KIDPQVMHERMKKLYNWHDVAKRT  139 (222)
Q Consensus        74 ~PvVa~~~gg~~e~i~~~~~g~-~~~~~~~la~~i~~ll~~~~--~~~~~~~~~~~~~~fs~~~~~~~~  139 (222)
                      +|||+++.||..|++.++.+|+ ..+|+++++++|.+++++++  ..++.++++.+.++|+|+.+++++
T Consensus       324 ~PvI~s~~~~~~e~i~~~~~g~~~~~~~~~~a~~i~~l~~~~~~~~~~~~~a~~~~~~~~s~~~~~~~~  392 (392)
T cd03805         324 KPVIACNSGGPLETVVDGETGFLCEPTPEEFAEAMLKLANDPDLADRMGAAGRKRVKEKFSTEAFAERL  392 (392)
T ss_pred             CCEEEECCCCcHHHhccCCceEEeCCCHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHhcCHHHHhhhC
Confidence            9999999999999999987775 45599999999999999886  678889999999999999998763

ALG2, a 1,3-mannosyltransferase, in yeast catalyzes the mannosylation of Man(2)GlcNAc(2)-dolichol diphosphate and Man(1)GlcNAc(2)-dolichol diphosphate to form Man(3)GlcNAc(2)-dolichol diphosphate. A deficiency of this enzyme causes an abnormal accumulation of Man1GlcNAc2-PP-dolichol and Man2GlcNAc2-PP-dolichol, which is associated with a type of congenital disorders of glycosylation (CDG), designated CDG-Ii, in humans.

>PRK09922 UDP-D-galactose:(glucosyl)lipopolysaccharide-1,6-D-galactosyltransferase; Provisional

Probab=99.91  E-value=1.5e-23  Score=181.05  Aligned_cols=145  Identities=17%  Similarity=0.126  Sum_probs=129.0

Q ss_pred             CceEEEEEcCCccHHHHHHHHHHcCCCCcEEEeCCCC--hhHHHHHHHhccEEEEcCCCccccHHHHHHHHhCCcEEEeC
Q 027511            3 VKVRFIVGGDGPKRVRLEEMREKHSLQDRVEMLGAVP--HAQVRSVLISGHIFLNSSLTEAFCIAILEAASCGLLTVSTR   80 (222)
Q Consensus         3 p~~~lvi~G~g~~~~~l~~~~~~~~l~~~V~~~g~v~--~~~~~~ll~~adv~v~~s~~E~~g~~ilEAma~G~PvVa~~   80 (222)
                      ++++|+|+|+|+.++.++++++++++.++|.|+|+++  .+++.++|..+|++|+||..|+||++++||||||+|||+++
T Consensus       209 ~~~~l~ivG~g~~~~~l~~~~~~~~l~~~v~f~G~~~~~~~~~~~~~~~~d~~v~~s~~Egf~~~~lEAma~G~Pvv~s~  288 (359)
T PRK09922        209 GEWQLHIIGDGSDFEKCKAYSRELGIEQRIIWHGWQSQPWEVVQQKIKNVSALLLTSKFEGFPMTLLEAMSYGIPCISSD  288 (359)
T ss_pred             CCeEEEEEeCCccHHHHHHHHHHcCCCCeEEEecccCCcHHHHHHHHhcCcEEEECCcccCcChHHHHHHHcCCCEEEeC
Confidence            4789999999999999999999999999999999884  48899999999999999999999999999999999999999


Q ss_pred             -CCCccccccCCceEEe--CCCHHHHHHHHHHHHhcCCCCCHHHHHHHHHhcCCHHHHHHHHHHHHHHHhc
Q 027511           81 -VGGVPEVLPDDMVVLA--EPDPGDMVLAIRKAISLLPKIDPQVMHERMKKLYNWHDVAKRTEIVYDRALE  148 (222)
Q Consensus        81 -~gg~~e~i~~~~~g~~--~~~~~~la~~i~~ll~~~~~~~~~~~~~~~~~~fs~~~~~~~~~~~~~~~~~  148 (222)
                       .||..|++.++.+|+.  ..|+++++++|.+++++++.. ...+......+|+-+.+.+++.+.|..+.+
T Consensus       289 ~~~g~~eiv~~~~~G~lv~~~d~~~la~~i~~l~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  358 (359)
T PRK09922        289 CMSGPRDIIKPGLNGELYTPGNIDEFVGKLNKVISGEVKY-QHDAIPNSIERFYEVLYFKNLNNALFSKLQ  358 (359)
T ss_pred             CCCChHHHccCCCceEEECCCCHHHHHHHHHHHHhCcccC-CHHHHHHHHHHhhHHHHHHHHHHHHHHHhc
Confidence             8999999999887754  348999999999999998733 345555566789999999999999998764

>cd03792 GT1_Trehalose_phosphorylase Trehalose phosphorylase (TP) reversibly catalyzes trehalose synthesis and degradation from alpha-glucose-1-phosphate (alpha-Glc-1-P) and glucose

Probab=99.91  E-value=5.4e-24  Score=184.44  Aligned_cols=144  Identities=15%  Similarity=0.175  Sum_probs=128.7

Q ss_pred             CCceEEEEEcCCccH-----HHHHHHHHHcCCCCcEEEeCCC--ChhHHHHHHHhccEEEEcCCCccccHHHHHHHHhCC
Q 027511            2 RVKVRFIVGGDGPKR-----VRLEEMREKHSLQDRVEMLGAV--PHAQVRSVLISGHIFLNSSLTEAFCIAILEAASCGL   74 (222)
Q Consensus         2 ~p~~~lvi~G~g~~~-----~~l~~~~~~~~l~~~V~~~g~v--~~~~~~~ll~~adv~v~~s~~E~~g~~ilEAma~G~   74 (222)
                      .|+++|+|+|+|+..     +.++++.+..++.++|.|+|..  +.+++..+|+.+|++++||..|+||++++|||+||+
T Consensus       219 ~~~~~l~i~G~g~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~ad~~v~~s~~Eg~g~~~lEA~a~G~  298 (372)
T cd03792         219 VPDPQLVLVGSGATDDPEGWIVYEEVLEYAEGDPDIHVLTLPPVSDLEVNALQRASTVVLQKSIREGFGLTVTEALWKGK  298 (372)
T ss_pred             CCCCEEEEEeCCCCCCchhHHHHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHhCeEEEeCCCccCCCHHHHHHHHcCC
Confidence            478999999998642     2355556567778889999986  889999999999999999999999999999999999


Q ss_pred             cEEEeCCCCccccccCCceEEeCCCHHHHHHHHHHHHhcCC--CCCHHHHHHHHHhcCCHHHHHHHHHHHHHH
Q 027511           75 LTVSTRVGGVPEVLPDDMVVLAEPDPGDMVLAIRKAISLLP--KIDPQVMHERMKKLYNWHDVAKRTEIVYDR  145 (222)
Q Consensus        75 PvVa~~~gg~~e~i~~~~~g~~~~~~~~la~~i~~ll~~~~--~~~~~~~~~~~~~~fs~~~~~~~~~~~~~~  145 (222)
                      |||+++.||..+++.++.+|+..+++++++.+|.+++++++  ..++.++++.+.+.|+|+.+++++.++|++
T Consensus       299 Pvv~s~~~~~~~~i~~~~~g~~~~~~~~~a~~i~~ll~~~~~~~~~~~~a~~~~~~~~s~~~~~~~~~~~~~~  371 (372)
T cd03792         299 PVIAGPVGGIPLQIEDGETGFLVDTVEEAAVRILYLLRDPELRRKMGANAREHVRENFLITRHLKDYLYLISK  371 (372)
T ss_pred             CEEEcCCCCchhhcccCCceEEeCCcHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHh
Confidence            99999999999999999999888889999999999998766  677888899999999999999999999975

The catalyzing activity includes the phosphorolysis of trehalose, which produce alpha-Glc-1-P and glucose, and the subsequent synthesis of trehalose. This family is most closely related to the GT1 family of glycosyltransferases.

>cd03802 GT1_AviGT4_like This family is most closely related to the GT1 family of glycosyltransferases

Probab=99.91  E-value=1.4e-23  Score=177.88  Aligned_cols=139  Identities=21%  Similarity=0.288  Sum_probs=123.8

Q ss_pred             CCceEEEEEcCCccHHHHHHHHHHcC-CCCcEEEeCCCChhHHHHHHHhccEEEEcCC-CccccHHHHHHHHhCCcEEEe
Q 027511            2 RVKVRFIVGGDGPKRVRLEEMREKHS-LQDRVEMLGAVPHAQVRSVLISGHIFLNSSL-TEAFCIAILEAASCGLLTVST   79 (222)
Q Consensus         2 ~p~~~lvi~G~g~~~~~l~~~~~~~~-l~~~V~~~g~v~~~~~~~ll~~adv~v~~s~-~E~~g~~ilEAma~G~PvVa~   79 (222)
                      .++++|+|+|+|+....+........ +.++|.|+|+++++++..+++.+|++++||. .|+||++++||||||+|||++
T Consensus       195 ~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~~v~~~G~~~~~~~~~~~~~~d~~v~ps~~~E~~~~~~lEAma~G~PvI~~  274 (335)
T cd03802         195 RAGIPLKLAGPVSDPDYFYREIAPELLDGPDIEYLGEVGGAEKAELLGNARALLFPILWEEPFGLVMIEAMACGTPVIAF  274 (335)
T ss_pred             hcCCeEEEEeCCCCHHHHHHHHHHhcccCCcEEEeCCCCHHHHHHHHHhCcEEEeCCcccCCcchHHHHHHhcCCCEEEe
Confidence            35789999999988877777666554 5689999999999999999999999999998 599999999999999999999


Q ss_pred             CCCCccccccCCceEEeCCCHHHHHHHHHHHHhcCCCCCHHHHHHHHHhcCCHHHHHHHHHHHHH
Q 027511           80 RVGGVPEVLPDDMVVLAEPDPGDMVLAIRKAISLLPKIDPQVMHERMKKLYNWHDVAKRTEIVYD  144 (222)
Q Consensus        80 ~~gg~~e~i~~~~~g~~~~~~~~la~~i~~ll~~~~~~~~~~~~~~~~~~fs~~~~~~~~~~~~~  144 (222)
                      +.||..|++.++.+|+..+++++++++|.++.+.    ...++++.+.++|||+.+++++.++|+
T Consensus       275 ~~~~~~e~i~~~~~g~l~~~~~~l~~~l~~l~~~----~~~~~~~~~~~~~s~~~~~~~~~~~y~  335 (335)
T cd03802         275 RRGAVPEVVEDGVTGFLVDSVEELAAAVARADRL----DRAACRRRAERRFSAARMVDDYLALYR  335 (335)
T ss_pred             CCCCchhheeCCCcEEEeCCHHHHHHHHHHHhcc----HHHHHHHHHHHhCCHHHHHHHHHHHhC
Confidence            9999999999998888777799999999998754    356778888999999999999999984

aviGT4 in Streptomyces viridochromogenes has been shown to be involved in biosynthesis of oligosaccharide antibiotic avilamycin A. Inactivation of aviGT4 resulted in a mutant that accumulated a novel avilamycin derivative lacking the terminal eurekanate residue.

>PRK10307 putative glycosyl transferase; Provisional

Probab=99.91  E-value=1.1e-23  Score=184.88  Aligned_cols=146  Identities=18%  Similarity=0.184  Sum_probs=130.0

Q ss_pred             CCceEEEEEcCCccHHHHHHHHHHcCCCCcEEEeCCCChhHHHHHHHhccEEEEcCCCcc----ccHHHHHHHHhCCcEE
Q 027511            2 RVKVRFIVGGDGPKRVRLEEMREKHSLQDRVEMLGAVPHAQVRSVLISGHIFLNSSLTEA----FCIAILEAASCGLLTV   77 (222)
Q Consensus         2 ~p~~~lvi~G~g~~~~~l~~~~~~~~l~~~V~~~g~v~~~~~~~ll~~adv~v~~s~~E~----~g~~ilEAma~G~PvV   77 (222)
                      .|+++|+|+|+|+.+++++++++++++. +|.|+|+++++++..+|++||+++.||..|+    +|.+++|||+||+|||
T Consensus       257 ~~~~~l~ivG~g~~~~~l~~~~~~~~l~-~v~f~G~~~~~~~~~~~~~aDi~v~ps~~e~~~~~~p~kl~eama~G~PVi  335 (412)
T PRK10307        257 RPDLIFVICGQGGGKARLEKMAQCRGLP-NVHFLPLQPYDRLPALLKMADCHLLPQKAGAADLVLPSKLTNMLASGRNVV  335 (412)
T ss_pred             CCCeEEEEECCChhHHHHHHHHHHcCCC-ceEEeCCCCHHHHHHHHHhcCEeEEeeccCcccccCcHHHHHHHHcCCCEE
Confidence            4789999999999999999999999986 7999999999999999999999999999888    6788999999999999


Q ss_pred             EeCCCC--ccccccCCceEEeC-CCHHHHHHHHHHHHhcCC--CCCHHHHHHHHHhcCCHHHHHHHHHHHHHHHhcC
Q 027511           78 STRVGG--VPEVLPDDMVVLAE-PDPGDMVLAIRKAISLLP--KIDPQVMHERMKKLYNWHDVAKRTEIVYDRALEC  149 (222)
Q Consensus        78 a~~~gg--~~e~i~~~~~g~~~-~~~~~la~~i~~ll~~~~--~~~~~~~~~~~~~~fs~~~~~~~~~~~~~~~~~~  149 (222)
                      +++.||  ..+++. +.+.+.. .|+++++++|.++++++.  ..++.++++.+.++|||+.+++++.++|++++.+
T Consensus       336 ~s~~~g~~~~~~i~-~~G~~~~~~d~~~la~~i~~l~~~~~~~~~~~~~a~~~~~~~fs~~~~~~~~~~~~~~~~~~  411 (412)
T PRK10307        336 ATAEPGTELGQLVE-GIGVCVEPESVEALVAAIAALARQALLRPKLGTVAREYAERTLDKENVLRQFIADIRGLVAE  411 (412)
T ss_pred             EEeCCCchHHHHHh-CCcEEeCCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHhcC
Confidence            999876  458887 3333333 489999999999998876  6788999999999999999999999999998764

>TIGR02468 sucrsPsyn_pln sucrose phosphate synthase/possible sucrose phosphate phosphatase, plant

Probab=99.91  E-value=1.1e-23  Score=198.41  Aligned_cols=146  Identities=18%  Similarity=0.219  Sum_probs=127.7

Q ss_pred             CceEEEEEcCCcc-----------HHHHHHHHHHcCCCCcEEEeCCCChhHHHHHHHhc----cEEEEcCCCccccHHHH
Q 027511            3 VKVRFIVGGDGPK-----------RVRLEEMREKHSLQDRVEMLGAVPHAQVRSVLISG----HIFLNSSLTEAFCIAIL   67 (222)
Q Consensus         3 p~~~lvi~G~g~~-----------~~~l~~~~~~~~l~~~V~~~g~v~~~~~~~ll~~a----dv~v~~s~~E~~g~~il   67 (222)
                      +++. +|+|+|+.           ...++.+++++++.++|.|+|+++++++..+|+.|    |+||+||.+|+||++++
T Consensus       511 ~nL~-LIiG~gdd~d~l~~~~~~~l~~L~~li~~lgL~g~V~FlG~v~~edvp~lYr~Ad~s~DVFV~PS~~EgFGLvlL  589 (1050)
T TIGR02468       511 ANLT-LIMGNRDDIDEMSSGSSSVLTSVLKLIDKYDLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLI  589 (1050)
T ss_pred             CCEE-EEEecCchhhhhhccchHHHHHHHHHHHHhCCCCeEEecCCCCHHHHHHHHHHhhhcCCeeeCCcccCCCCHHHH
Confidence            4665 45676653           24577889999999999999999999999999988    69999999999999999


Q ss_pred             HHHHhCCcEEEeCCCCccccccCCceEEeC-C-CHHHHHHHHHHHHhcCC--CCCHHHHHHHHHhcCCHHHHHHHHHHHH
Q 027511           68 EAASCGLLTVSTRVGGVPEVLPDDMVVLAE-P-DPGDMVLAIRKAISLLP--KIDPQVMHERMKKLYNWHDVAKRTEIVY  143 (222)
Q Consensus        68 EAma~G~PvVa~~~gg~~e~i~~~~~g~~~-~-~~~~la~~i~~ll~~~~--~~~~~~~~~~~~~~fs~~~~~~~~~~~~  143 (222)
                      ||||||+|||+|+.||+.|++.++.+|+.. + |+++|+++|.++++++.  ..++.++++++. .|+|+.+++++.+.|
T Consensus       590 EAMAcGlPVVASdvGG~~EII~~g~nGlLVdP~D~eaLA~AL~~LL~Dpelr~~m~~~gr~~v~-~FSWe~ia~~yl~~i  668 (1050)
T TIGR02468       590 EAAAHGLPMVATKNGGPVDIHRVLDNGLLVDPHDQQAIADALLKLVADKQLWAECRQNGLKNIH-LFSWPEHCKTYLSRI  668 (1050)
T ss_pred             HHHHhCCCEEEeCCCCcHHHhccCCcEEEECCCCHHHHHHHHHHHhhCHHHHHHHHHHHHHHHH-HCCHHHHHHHHHHHH
Confidence            999999999999999999999998877543 3 89999999999999877  677888888875 699999999999999


Q ss_pred             HHHhcCC
Q 027511          144 DRALECP  150 (222)
Q Consensus       144 ~~~~~~~  150 (222)
                      ..+...+
T Consensus       669 ~~~~~~~  675 (1050)
T TIGR02468       669 ASCRPRH  675 (1050)
T ss_pred             HHHhccC
Confidence            9887654

Members of this family are sucrose-phosphate synthases of plants. This enzyme is known to exist in multigene families in several species of both monocots and dicots. The N-terminal domain is the glucosyltransferase domain. Members of this family also have a variable linker region and a C-terminal domain that resembles sucrose phosphate phosphatase (SPP) (EC 3.1.3.24) (see TIGR01485), the next and final enzyme of sucrose biosynthesis. The SPP-like domain likely serves a binding and not a catalytic function, as the reported SPP is always encoded by a distinct protein.

>cd03818 GT1_ExpC_like This family is most closely related to the GT1 family of glycosyltransferases

Probab=99.91  E-value=7.6e-24  Score=185.09  Aligned_cols=139  Identities=20%  Similarity=0.220  Sum_probs=119.3

Q ss_pred             CCceEEEEEcCCcc---------HHHHHHHHHHcCC---CCcEEEeCCCChhHHHHHHHhccEEEEcCCCccccHHHHHH
Q 027511            2 RVKVRFIVGGDGPK---------RVRLEEMREKHSL---QDRVEMLGAVPHAQVRSVLISGHIFLNSSLTEAFCIAILEA   69 (222)
Q Consensus         2 ~p~~~lvi~G~g~~---------~~~l~~~~~~~~l---~~~V~~~g~v~~~~~~~ll~~adv~v~~s~~E~~g~~ilEA   69 (222)
                      .|+++|+|+|++..         ....+++.++++.   .++|.|+|+++++++..+|+.||++++||..|++|++++||
T Consensus       241 ~~~~~lvivG~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~V~f~G~v~~~~~~~~l~~adv~v~~s~~e~~~~~llEA  320 (396)
T cd03818         241 RPDARVVIVGGDGVSYGAPPPDGESWKQHMLDELGGRLDLSRVHFLGRVPYDQYLALLQVSDVHVYLTYPFVLSWSLLEA  320 (396)
T ss_pred             CCCcEEEEEcCCCcccCCCCCCcccHHHHHHHHhhcccCcceEEEeCCCCHHHHHHHHHhCcEEEEcCcccccchHHHHH
Confidence            58999999997421         1123334444432   47899999999999999999999999999999999999999


Q ss_pred             HHhCCcEEEeCCCCccccccCCceEEeCC--CHHHHHHHHHHHHhcCC--CCCHHHHHHHHHhcCCHHHHHHHHH
Q 027511           70 ASCGLLTVSTRVGGVPEVLPDDMVVLAEP--DPGDMVLAIRKAISLLP--KIDPQVMHERMKKLYNWHDVAKRTE  140 (222)
Q Consensus        70 ma~G~PvVa~~~gg~~e~i~~~~~g~~~~--~~~~la~~i~~ll~~~~--~~~~~~~~~~~~~~fs~~~~~~~~~  140 (222)
                      ||||+|||+++.||..|++.++.+|+..+  |+++++++|.+++++++  ..++.++++++.++|+|+.+++++.
T Consensus       321 mA~G~PVIas~~~g~~e~i~~~~~G~lv~~~d~~~la~~i~~ll~~~~~~~~l~~~ar~~~~~~fs~~~~~~~~~  395 (396)
T cd03818         321 MACGCLVVGSDTAPVREVITDGENGLLVDFFDPDALAAAVIELLDDPARRARLRRAARRTALRYDLLSVCLPRQL  395 (396)
T ss_pred             HHCCCCEEEcCCCCchhhcccCCceEEcCCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhccHHHHHHHHh
Confidence            99999999999999999999988776544  89999999999999876  6788999999999999999998875

ExpC in Rhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucan (exopolysaccharide II).

>cd03813 GT1_like_3 This family is most closely related to the GT1 family of glycosyltransferases

Probab=99.91  E-value=5.4e-24  Score=190.46  Aligned_cols=140  Identities=21%  Similarity=0.245  Sum_probs=126.1

Q ss_pred             CCceEEEEEcCCc----cHHHHHHHHHHcCCCCcEEEeCCCChhHHHHHHHhccEEEEcCCCccccHHHHHHHHhCCcEE
Q 027511            2 RVKVRFIVGGDGP----KRVRLEEMREKHSLQDRVEMLGAVPHAQVRSVLISGHIFLNSSLTEAFCIAILEAASCGLLTV   77 (222)
Q Consensus         2 ~p~~~lvi~G~g~----~~~~l~~~~~~~~l~~~V~~~g~v~~~~~~~ll~~adv~v~~s~~E~~g~~ilEAma~G~PvV   77 (222)
                      .|+++|+|+|+|+    ..++++++++++++.++|.|+|   .+++.++|+++|++|+||..|+||++++||||||+|||
T Consensus       322 ~p~~~l~IvG~g~~~~~~~~e~~~li~~l~l~~~V~f~G---~~~v~~~l~~aDv~vlpS~~Eg~p~~vlEAma~G~PVV  398 (475)
T cd03813         322 IPDAEGWVIGPTDEDPEYAEECRELVESLGLEDNVKFTG---FQNVKEYLPKLDVLVLTSISEGQPLVILEAMAAGIPVV  398 (475)
T ss_pred             CCCeEEEEECCCCcChHHHHHHHHHHHHhCCCCeEEEcC---CccHHHHHHhCCEEEeCchhhcCChHHHHHHHcCCCEE
Confidence            5899999999884    2467788899999999999999   57899999999999999999999999999999999999


Q ss_pred             EeCCCCccccccC------CceEEe-C-CCHHHHHHHHHHHHhcCC--CCCHHHHHHHHHhcCCHHHHHHHHHHHHH
Q 027511           78 STRVGGVPEVLPD------DMVVLA-E-PDPGDMVLAIRKAISLLP--KIDPQVMHERMKKLYNWHDVAKRTEIVYD  144 (222)
Q Consensus        78 a~~~gg~~e~i~~------~~~g~~-~-~~~~~la~~i~~ll~~~~--~~~~~~~~~~~~~~fs~~~~~~~~~~~~~  144 (222)
                      +|+.|+..|++.+      +.+|+. . .|+++++++|.+++++++  ..++.++++++.+.|+|+.+++++.++|+
T Consensus       399 atd~g~~~elv~~~~~~~~g~~G~lv~~~d~~~la~ai~~ll~~~~~~~~~~~~a~~~v~~~~s~~~~~~~y~~lY~  475 (475)
T cd03813         399 ATDVGSCRELIEGADDEALGPAGEVVPPADPEALARAILRLLKDPELRRAMGEAGRKRVERYYTLERMIDSYRRLYL  475 (475)
T ss_pred             ECCCCChHHHhcCCcccccCCceEEECCCCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHhC
Confidence            9999999999998      445543 3 389999999999999876  77889999999999999999999999984

Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog

>cd04962 GT1_like_5 This family is most closely related to the GT1 family of glycosyltransferases

Probab=99.91  E-value=1.9e-23  Score=179.78  Aligned_cols=141  Identities=28%  Similarity=0.414  Sum_probs=129.4

Q ss_pred             CceEEEEEcCCccHHHHHHHHHHcCCCCcEEEeCCCChhHHHHHHHhccEEEEcCCCccccHHHHHHHHhCCcEEEeCCC
Q 027511            3 VKVRFIVGGDGPKRVRLEEMREKHSLQDRVEMLGAVPHAQVRSVLISGHIFLNSSLTEAFCIAILEAASCGLLTVSTRVG   82 (222)
Q Consensus         3 p~~~lvi~G~g~~~~~l~~~~~~~~l~~~V~~~g~v~~~~~~~ll~~adv~v~~s~~E~~g~~ilEAma~G~PvVa~~~g   82 (222)
                      ++++++++|+|+..+.+++++++++++++|.|+|..  +++..+|+.+|++|+||..|+||++++|||+||+|||+++.|
T Consensus       226 ~~~~l~i~G~g~~~~~~~~~~~~~~~~~~v~~~g~~--~~~~~~~~~~d~~v~ps~~E~~~~~~~EAma~g~PvI~s~~~  303 (371)
T cd04962         226 VPARLLLVGDGPERSPAERLARELGLQDDVLFLGKQ--DHVEELLSIADLFLLPSEKESFGLAALEAMACGVPVVASNAG  303 (371)
T ss_pred             CCceEEEEcCCcCHHHHHHHHHHcCCCceEEEecCc--ccHHHHHHhcCEEEeCCCcCCCccHHHHHHHcCCCEEEeCCC
Confidence            468999999999999999999999999999999985  679999999999999999999999999999999999999999


Q ss_pred             CccccccCCceEEeCC--CHHHHHHHHHHHHhcCC--CCCHHHHHHHHHhcCCHHHHHHHHHHHHHH
Q 027511           83 GVPEVLPDDMVVLAEP--DPGDMVLAIRKAISLLP--KIDPQVMHERMKKLYNWHDVAKRTEIVYDR  145 (222)
Q Consensus        83 g~~e~i~~~~~g~~~~--~~~~la~~i~~ll~~~~--~~~~~~~~~~~~~~fs~~~~~~~~~~~~~~  145 (222)
                      +.+|++.++.+|+..+  |+++++++|.++++++.  ..++.++++.+.+.|+|+.+++++.++|++
T Consensus       304 ~~~e~i~~~~~G~~~~~~~~~~l~~~i~~l~~~~~~~~~~~~~~~~~~~~~fs~~~~~~~~~~~y~~  370 (371)
T cd04962         304 GIPEVVKHGETGFLVDVGDVEAMAEYALSLLEDDELWQEFSRAARNRAAERFDSERIVPQYEALYRR  370 (371)
T ss_pred             CchhhhcCCCceEEcCCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHh
Confidence            9999999987776544  89999999999998876  567888888888999999999999999975

Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog

>cd03806 GT1_ALG11_like This family is most closely related to the GT1 family of glycosyltransferases

Probab=99.91  E-value=1.3e-23  Score=185.19  Aligned_cols=135  Identities=19%  Similarity=0.292  Sum_probs=119.0

Q ss_pred             CceEEEEEcCCc------cHHHHHHHHHHcCCCCcEEEeCCCChhHHHHHHHhccEEEEcCCCccccHHHHHHHHhCCcE
Q 027511            3 VKVRFIVGGDGP------KRVRLEEMREKHSLQDRVEMLGAVPHAQVRSVLISGHIFLNSSLTEAFCIAILEAASCGLLT   76 (222)
Q Consensus         3 p~~~lvi~G~g~------~~~~l~~~~~~~~l~~~V~~~g~v~~~~~~~ll~~adv~v~~s~~E~~g~~ilEAma~G~Pv   76 (222)
                      ++++|+|+|+|.      ..++++++++++++.++|.|+|.++++++..+|+.||++|+||..|+||++++|||+||+||
T Consensus       272 ~~~~lvivG~~~~~~~~~~~~~L~~~~~~l~l~~~V~f~g~v~~~~l~~~l~~adv~v~~s~~E~Fgi~~lEAMa~G~pv  351 (419)
T cd03806         272 EKIKLVLIGSCRNEDDEKRVEDLKLLAKELGLEDKVEFVVNAPFEELLEELSTASIGLHTMWNEHFGIGVVEYMAAGLIP  351 (419)
T ss_pred             CceEEEEEcCCCCcccHHHHHHHHHHHHHhCCCCeEEEecCCCHHHHHHHHHhCeEEEECCccCCcccHHHHHHHcCCcE
Confidence            469999999874      34678889999999999999999999999999999999999999999999999999999999


Q ss_pred             EEeCCCCc-ccccc---CCceEEeCCCHHHHHHHHHHHHhcCC--CCCHHHHHHHHHhcCCHHHHHH
Q 027511           77 VSTRVGGV-PEVLP---DDMVVLAEPDPGDMVLAIRKAISLLP--KIDPQVMHERMKKLYNWHDVAK  137 (222)
Q Consensus        77 Va~~~gg~-~e~i~---~~~~g~~~~~~~~la~~i~~ll~~~~--~~~~~~~~~~~~~~fs~~~~~~  137 (222)
                      |+++.||. .|++.   ++.+|+..+|+++++++|.++++++.  +.++.++++.+.++|||+.+.+
T Consensus       352 Ia~~~ggp~~~iv~~~~~g~~G~l~~d~~~la~ai~~ll~~~~~~~~~~~~~~~~~~~~fs~~~f~~  418 (419)
T cd03806         352 LAHASGGPLLDIVVPWDGGPTGFLASTAEEYAEAIEKILSLSEEERLRIRRAARSSVKRFSDEEFER  418 (419)
T ss_pred             EEEcCCCCchheeeccCCCCceEEeCCHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhhCHHHhcc
Confidence            99999875 57777   78888887899999999999999765  4445777777889999998754

ALG11 in yeast is involved in adding the final 1,2-linked Man to the Man5GlcNAc2-PP-Dol synthesized on the cytosolic face of the ER. The deletion analysis of ALG11 was shown to block the early steps of core biosynthesis that takes place on the cytoplasmic face of the ER and lead to a defect in the assembly of lipid-linked oligosaccharides.

>cd04946 GT1_AmsK_like This family is most closely related to the GT1 family of glycosyltransferases

Probab=99.90  E-value=1.6e-23  Score=184.06  Aligned_cols=137  Identities=23%  Similarity=0.356  Sum_probs=124.9

Q ss_pred             ceEEEEEcCCccHHHHHHHHHHcCCCCcEEEeCCCChhHHHHHHHh--ccEEEEcCCCccccHHHHHHHHhCCcEEEeCC
Q 027511            4 KVRFIVGGDGPKRVRLEEMREKHSLQDRVEMLGAVPHAQVRSVLIS--GHIFLNSSLTEAFCIAILEAASCGLLTVSTRV   81 (222)
Q Consensus         4 ~~~lvi~G~g~~~~~l~~~~~~~~l~~~V~~~g~v~~~~~~~ll~~--adv~v~~s~~E~~g~~ilEAma~G~PvVa~~~   81 (222)
                      +++++++|+|+..+.+++++++++..++|.|+|+++++++..+++.  +|++++||..|++|++++|||+||+|||+|++
T Consensus       263 ~l~~~iiG~g~~~~~l~~~~~~~~~~~~V~f~G~v~~~e~~~~~~~~~~~v~v~~S~~Eg~p~~llEAma~G~PVIas~v  342 (407)
T cd04946         263 KIKWTHIGGGPLEDTLKELAESKPENISVNFTGELSNSEVYKLYKENPVDVFVNLSESEGLPVSIMEAMSFGIPVIATNV  342 (407)
T ss_pred             eEEEEEEeCchHHHHHHHHHHhcCCCceEEEecCCChHHHHHHHhhcCCCEEEeCCccccccHHHHHHHHcCCCEEeCCC
Confidence            5678899999999999999988888889999999999999999976  78999999999999999999999999999999


Q ss_pred             CCccccccCCceEEe-CC--CHHHHHHHHHHHHhcCC--CCCHHHHHHHHHhcCCHHHHHHHHH
Q 027511           82 GGVPEVLPDDMVVLA-EP--DPGDMVLAIRKAISLLP--KIDPQVMHERMKKLYNWHDVAKRTE  140 (222)
Q Consensus        82 gg~~e~i~~~~~g~~-~~--~~~~la~~i~~ll~~~~--~~~~~~~~~~~~~~fs~~~~~~~~~  140 (222)
                      ||.+|++.++.+|+. ++  |+++++++|.+++++++  ..++.++++.+.++|+|+...+++.
T Consensus       343 gg~~e~i~~~~~G~l~~~~~~~~~la~~I~~ll~~~~~~~~m~~~ar~~~~~~f~~~~~~~~~~  406 (407)
T cd04946         343 GGTPEIVDNGGNGLLLSKDPTPNELVSSLSKFIDNEEEYQTMREKAREKWEENFNASKNYREFA  406 (407)
T ss_pred             CCcHHHhcCCCcEEEeCCCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHcCHHHhHHHhc
Confidence            999999999977653 32  78999999999999776  7789999999999999999998874

AmsK is involved in the biosynthesis of amylovoran, which functions as a virulence factor. It functions as a glycosyl transferase which transfers galactose from UDP-galactose to a lipid-linked amylovoran-subunit precursor. The members of this family are found mainly in bacteria and Archaea.

>cd04951 GT1_WbdM_like This family is most closely related to the GT1 family of glycosyltransferases and is named after WbdM in Escherichia coli

Probab=99.90  E-value=5e-23  Score=175.74  Aligned_cols=141  Identities=26%  Similarity=0.445  Sum_probs=126.1

Q ss_pred             CCceEEEEEcCCccHHHHHHHHHHcCCCCcEEEeCCCChhHHHHHHHhccEEEEcCCCccccHHHHHHHHhCCcEEEeCC
Q 027511            2 RVKVRFIVGGDGPKRVRLEEMREKHSLQDRVEMLGAVPHAQVRSVLISGHIFLNSSLTEAFCIAILEAASCGLLTVSTRV   81 (222)
Q Consensus         2 ~p~~~lvi~G~g~~~~~l~~~~~~~~l~~~V~~~g~v~~~~~~~ll~~adv~v~~s~~E~~g~~ilEAma~G~PvVa~~~   81 (222)
                      +|+++|+|+|+|+..+++++.++++++.++|.|+|.+  +++..+|+.||++++||..|+||++++|||++|+|||+++.
T Consensus       217 ~~~~~l~i~G~g~~~~~~~~~~~~~~~~~~v~~~g~~--~~~~~~~~~ad~~v~~s~~e~~~~~~~Ea~a~G~PvI~~~~  294 (360)
T cd04951         217 YLDIKLLIAGDGPLRATLERLIKALGLSNRVKLLGLR--DDIAAYYNAADLFVLSSAWEGFGLVVAEAMACELPVVATDA  294 (360)
T ss_pred             CCCeEEEEEcCCCcHHHHHHHHHhcCCCCcEEEeccc--ccHHHHHHhhceEEecccccCCChHHHHHHHcCCCEEEecC
Confidence            5789999999999999999999999998999999985  68999999999999999999999999999999999999999


Q ss_pred             CCccccccCCceEEeCCCHHHHHHHHHHHHhcCC--CCCHHHHHHHHHhcCCHHHHHHHHHHHHH
Q 027511           82 GGVPEVLPDDMVVLAEPDPGDMVLAIRKAISLLP--KIDPQVMHERMKKLYNWHDVAKRTEIVYD  144 (222)
Q Consensus        82 gg~~e~i~~~~~g~~~~~~~~la~~i~~ll~~~~--~~~~~~~~~~~~~~fs~~~~~~~~~~~~~  144 (222)
                      |+..|++.+.+..+...|+++++++|.+++++..  .....+++..+.+.|+|+.+++++.++|+
T Consensus       295 ~~~~e~i~~~g~~~~~~~~~~~~~~i~~ll~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~y~  359 (360)
T cd04951         295 GGVREVVGDSGLIVPISDPEALANKIDEILKMSGEERDIIGARRERIVKKFSINSIVQQWLTLYT  359 (360)
T ss_pred             CChhhEecCCceEeCCCCHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHhh
Confidence            9999999986666666799999999999996544  33344447788899999999999999996

In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have

>TIGR02470 sucr_synth sucrose synthase

Probab=99.90  E-value=2.4e-23  Score=192.36  Aligned_cols=141  Identities=21%  Similarity=0.302  Sum_probs=120.0

Q ss_pred             CceEEEEEcCCcc------------HHHHHHHHHHcCCCCcEEEeCCC-ChhHHHHHHH----hccEEEEcCCCccccHH
Q 027511            3 VKVRFIVGGDGPK------------RVRLEEMREKHSLQDRVEMLGAV-PHAQVRSVLI----SGHIFLNSSLTEAFCIA   65 (222)
Q Consensus         3 p~~~lvi~G~g~~------------~~~l~~~~~~~~l~~~V~~~g~v-~~~~~~~ll~----~adv~v~~s~~E~~g~~   65 (222)
                      ++++|+|+|+++.            ..++.++++++++.++|.|+|.. +..+...+++    ++|+||+||.+|+||++
T Consensus       580 ~~~~LVIVGGg~~~~~s~d~ee~~~i~~L~~la~~~gL~g~V~flG~~~~~~~~~elyr~iAd~adVfV~PS~~EpFGLv  659 (784)
T TIGR02470       580 ELVNLVVVAGKLDAKESKDREEQAEIEKMHNLIDQYQLHGQIRWIGAQLNRVRNGELYRYIADTKGIFVQPALYEAFGLT  659 (784)
T ss_pred             CCeEEEEEeCCcccccccchhHHHHHHHHHHHHHHhCCCCeEEEccCcCCcccHHHHHHHhhccCcEEEECCcccCCCHH
Confidence            4688999997642            24567788999999999999985 5566666665    35799999999999999


Q ss_pred             HHHHHHhCCcEEEeCCCCccccccCCceEEeCC--CHHHHHHHHHHHHh----cCC--CCCHHHHHHHHHhcCCHHHHHH
Q 027511           66 ILEAASCGLLTVSTRVGGVPEVLPDDMVVLAEP--DPGDMVLAIRKAIS----LLP--KIDPQVMHERMKKLYNWHDVAK  137 (222)
Q Consensus        66 ilEAma~G~PvVa~~~gg~~e~i~~~~~g~~~~--~~~~la~~i~~ll~----~~~--~~~~~~~~~~~~~~fs~~~~~~  137 (222)
                      ++|||+||+|||+|++||+.|++.++.+|+..+  |+++++++|.++++    ++.  +.++.++++++.++|||+.+++
T Consensus       660 vLEAMAcGlPVVAT~~GG~~EiV~dg~tGfLVdp~D~eaLA~aL~~ll~kll~dp~~~~~ms~~a~~rV~~~FSW~~~A~  739 (784)
T TIGR02470       660 VLEAMTCGLPTFATRFGGPLEIIQDGVSGFHIDPYHGEEAAEKIVDFFEKCDEDPSYWQKISQGGLQRIYEKYTWKIYSE  739 (784)
T ss_pred             HHHHHHcCCCEEEcCCCCHHHHhcCCCcEEEeCCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHH
Confidence            999999999999999999999999998886543  89999999999874    444  6788889999999999999999


Q ss_pred             HHHHHH
Q 027511          138 RTEIVY  143 (222)
Q Consensus       138 ~~~~~~  143 (222)
                      ++.++.
T Consensus       740 ~ll~l~  745 (784)
T TIGR02470       740 RLLTLA  745 (784)
T ss_pred             HHHHHH
Confidence            999876

This model represents sucrose synthase, an enzyme that, despite its name, generally uses rather produces sucrose. Sucrose plus UDP (or ADP) becomes D-fructose plus UDP-glucose (or ADP-glucose), which is then available for cell wall (or starch) biosynthesis. The enzyme is homologous to sucrose phosphate synthase, which catalyzes the penultimate step in sucrose synthesis. Sucrose synthase is found, so far, exclusively in plants and cyanobacteria.

>PLN00142 sucrose synthase

Probab=99.90  E-value=4.7e-23  Score=190.66  Aligned_cols=142  Identities=22%  Similarity=0.301  Sum_probs=120.4

Q ss_pred             CCceEEEEEcCCc------cH------HHHHHHHHHcCCCCcEEEeCCC----ChhHHHHHHHh-ccEEEEcCCCccccH
Q 027511            2 RVKVRFIVGGDGP------KR------VRLEEMREKHSLQDRVEMLGAV----PHAQVRSVLIS-GHIFLNSSLTEAFCI   64 (222)
Q Consensus         2 ~p~~~lvi~G~g~------~~------~~l~~~~~~~~l~~~V~~~g~v----~~~~~~~ll~~-adv~v~~s~~E~~g~   64 (222)
                      .++++|+|+|+|.      ..      ..+.++++++++.++|.|+|..    +.+++..+++. +|+||+||.+|+||+
T Consensus       602 ~~~~~LVIVGgg~d~~~s~d~ee~~el~~L~~La~~lgL~~~V~flG~~~~~~~~~eLyr~iadaaDVfVlPS~~EgFGL  681 (815)
T PLN00142        602 RELVNLVVVGGFIDPSKSKDREEIAEIKKMHSLIEKYNLKGQFRWIAAQTNRVRNGELYRYIADTKGAFVQPALYEAFGL  681 (815)
T ss_pred             CCCcEEEEEECCccccccccHHHHHHHHHHHHHHHHcCCCCcEEEcCCcCCcccHHHHHHHHHhhCCEEEeCCcccCCCH
Confidence            3578999999872      11      3466788999999999999854    34677777774 799999999999999


Q ss_pred             HHHHHHHhCCcEEEeCCCCccccccCCceEEeCC--CHHHHHHHHHHHH----hcCC--CCCHHHHHHHHHhcCCHHHHH
Q 027511           65 AILEAASCGLLTVSTRVGGVPEVLPDDMVVLAEP--DPGDMVLAIRKAI----SLLP--KIDPQVMHERMKKLYNWHDVA  136 (222)
Q Consensus        65 ~ilEAma~G~PvVa~~~gg~~e~i~~~~~g~~~~--~~~~la~~i~~ll----~~~~--~~~~~~~~~~~~~~fs~~~~~  136 (222)
                      +++||||||+|||+|+.||+.|++.++.+|+..+  |+++++++|.+++    .++.  ..++.++++++.++|||+.++
T Consensus       682 vvLEAMA~GlPVVATdvGG~~EIV~dG~tG~LV~P~D~eaLA~aI~~lLekLl~Dp~lr~~mg~~Ar~rv~e~FSWe~~A  761 (815)
T PLN00142        682 TVVEAMTCGLPTFATCQGGPAEIIVDGVSGFHIDPYHGDEAANKIADFFEKCKEDPSYWNKISDAGLQRIYECYTWKIYA  761 (815)
T ss_pred             HHHHHHHcCCCEEEcCCCCHHHHhcCCCcEEEeCCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHH
Confidence            9999999999999999999999999998886543  8999999998766    3444  678889999999999999999


Q ss_pred             HHHHHHH
Q 027511          137 KRTEIVY  143 (222)
Q Consensus       137 ~~~~~~~  143 (222)
                      +++.++.
T Consensus       762 ~rll~L~  768 (815)
T PLN00142        762 ERLLTLG  768 (815)
T ss_pred             HHHHHHH
Confidence            9999876

>cd04955 GT1_like_6 This family is most closely related to the GT1 family of glycosyltransferases

Probab=99.90  E-value=6.6e-23  Score=175.37  Aligned_cols=139  Identities=16%  Similarity=0.260  Sum_probs=122.2

Q ss_pred             ceEEEEEcCCccHHHHHHHHH-HcCCCCcEEEeCCCChhHHHHHHHhccEEEEcCCC-ccccHHHHHHHHhCCcEEEeCC
Q 027511            4 KVRFIVGGDGPKRVRLEEMRE-KHSLQDRVEMLGAVPHAQVRSVLISGHIFLNSSLT-EAFCIAILEAASCGLLTVSTRV   81 (222)
Q Consensus         4 ~~~lvi~G~g~~~~~l~~~~~-~~~l~~~V~~~g~v~~~~~~~ll~~adv~v~~s~~-E~~g~~ilEAma~G~PvVa~~~   81 (222)
                      +++|+++|+|+....+.+.++ ++++.++|+|+|+++++++.++++++|+++.||.. |+||++++|||+||+|||+++.
T Consensus       221 ~~~l~ivG~~~~~~~~~~~~~~~~~~~~~V~~~g~~~~~~~~~~~~~ad~~v~ps~~~e~~~~~~~EAma~G~PvI~s~~  300 (363)
T cd04955         221 GKKLVIVGNADHNTPYGKLLKEKAAADPRIIFVGPIYDQELLELLRYAALFYLHGHSVGGTNPSLLEAMAYGCPVLASDN  300 (363)
T ss_pred             CceEEEEcCCCCcchHHHHHHHHhCCCCcEEEccccChHHHHHHHHhCCEEEeCCccCCCCChHHHHHHHcCCCEEEecC
Confidence            689999999876666666555 67888999999999999999999999999999998 9999999999999999999999


Q ss_pred             CCccccccCCceEEeCCCHHHHHHHHHHHHhcCC--CCCHHHHHHHHHhcCCHHHHHHHHHHHHH
Q 027511           82 GGVPEVLPDDMVVLAEPDPGDMVLAIRKAISLLP--KIDPQVMHERMKKLYNWHDVAKRTEIVYD  144 (222)
Q Consensus        82 gg~~e~i~~~~~g~~~~~~~~la~~i~~ll~~~~--~~~~~~~~~~~~~~fs~~~~~~~~~~~~~  144 (222)
                      |+..|++.++..++..+++  ++++|.++++++.  ..++.++++.+.+.|||+.+++++.++|+
T Consensus       301 ~~~~e~~~~~g~~~~~~~~--l~~~i~~l~~~~~~~~~~~~~~~~~~~~~fs~~~~~~~~~~~y~  363 (363)
T cd04955         301 PFNREVLGDKAIYFKVGDD--LASLLEELEADPEEVSAMAKAARERIREKYTWEKIADQYEELYK  363 (363)
T ss_pred             CccceeecCCeeEecCchH--HHHHHHHHHhCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHhC
Confidence            9999999885444444343  9999999999876  66788889999999999999999999884

Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog

>PLN02939 transferase, transferring glycosyl groups

Probab=99.89  E-value=1.8e-22  Score=188.00  Aligned_cols=144  Identities=18%  Similarity=0.308  Sum_probs=122.2

Q ss_pred             CceEEEEEcCCccH---HHHHHHHHHcCCCCcEEEeCCCChhHHHHHHHhccEEEEcCCCccccHHHHHHHHhCCcEEEe
Q 027511            3 VKVRFIVGGDGPKR---VRLEEMREKHSLQDRVEMLGAVPHAQVRSVLISGHIFLNSSLTEAFCIAILEAASCGLLTVST   79 (222)
Q Consensus         3 p~~~lvi~G~g~~~---~~l~~~~~~~~l~~~V~~~g~v~~~~~~~ll~~adv~v~~s~~E~~g~~ilEAma~G~PvVa~   79 (222)
                      ++++|+|+|+|+..   .+++++++++++.++|.|+|.++......+|+.+|+||+||.+|+||++++|||+||+|+|++
T Consensus       807 ~dvqLVIvGdGp~~~~e~eL~~La~~l~l~drV~FlG~~de~lah~IYAaADIFLmPSr~EPfGLvqLEAMAyGtPPVVs  886 (977)
T PLN02939        807 LGGQFVLLGSSPVPHIQREFEGIADQFQSNNNIRLILKYDEALSHSIYAASDMFIIPSMFEPCGLTQMIAMRYGSVPIVR  886 (977)
T ss_pred             cCCEEEEEeCCCcHHHHHHHHHHHHHcCCCCeEEEEeccCHHHHHHHHHhCCEEEECCCccCCcHHHHHHHHCCCCEEEe
Confidence            47899999999753   678888999999899999999987778899999999999999999999999999999999999


Q ss_pred             CCCCccccccC---------CceEEe--CCCHHHHHHHHHHHHhc----CC--CCCHHHHHHHHHhcCCHHHHHHHHHHH
Q 027511           80 RVGGVPEVLPD---------DMVVLA--EPDPGDMVLAIRKAISL----LP--KIDPQVMHERMKKLYNWHDVAKRTEIV  142 (222)
Q Consensus        80 ~~gg~~e~i~~---------~~~g~~--~~~~~~la~~i~~ll~~----~~--~~~~~~~~~~~~~~fs~~~~~~~~~~~  142 (222)
                      ++||+.|+|.+         +.+||.  +.|+++++++|.+++..    +.  ..++   .+...+.|||+.++++|+++
T Consensus       887 ~vGGL~DtV~d~d~e~i~~eg~NGfLf~~~D~eaLa~AL~rAL~~~~~dpe~~~~L~---~~am~~dFSWe~~A~qYeeL  963 (977)
T PLN02939        887 KTGGLNDSVFDFDDETIPVELRNGFTFLTPDEQGLNSALERAFNYYKRKPEVWKQLV---QKDMNIDFSWDSSASQYEEL  963 (977)
T ss_pred             cCCCCcceeecCCccccccCCCceEEecCCCHHHHHHHHHHHHHHhccCHHHHHHHH---HHHHHhcCCHHHHHHHHHHH
Confidence            99999999865         356654  34999999999998863    22  2222   23345789999999999999


Q ss_pred             HHHHhcC
Q 027511          143 YDRALEC  149 (222)
Q Consensus       143 ~~~~~~~  149 (222)
                      |++++..
T Consensus       964 Y~~ll~~  970 (977)
T PLN02939        964 YQRAVAR  970 (977)
T ss_pred             HHHHHHh
Confidence            9998754

>PLN02846 digalactosyldiacylglycerol synthase

Probab=99.89  E-value=1.8e-22  Score=178.24  Aligned_cols=135  Identities=21%  Similarity=0.212  Sum_probs=116.8

Q ss_pred             CCceEEEEEcCCccHHHHHHHHHHcCCCCcEEEeCCCChhHHHHHHHhccEEEEcCCCccccHHHHHHHHhCCcEEEeCC
Q 027511            2 RVKVRFIVGGDGPKRVRLEEMREKHSLQDRVEMLGAVPHAQVRSVLISGHIFLNSSLTEAFCIAILEAASCGLLTVSTRV   81 (222)
Q Consensus         2 ~p~~~lvi~G~g~~~~~l~~~~~~~~l~~~V~~~g~v~~~~~~~ll~~adv~v~~s~~E~~g~~ilEAma~G~PvVa~~~   81 (222)
                      .|+++|+|+|+|+.+++++++++++++..++ |.|....   .+++..+|+||+||.+|+||++++||||||+|||+++.
T Consensus       257 ~~~~~l~ivGdGp~~~~L~~~a~~l~l~~~v-f~G~~~~---~~~~~~~DvFv~pS~~Et~g~v~lEAmA~G~PVVa~~~  332 (462)
T PLN02846        257 LSGLEVDLYGSGEDSDEVKAAAEKLELDVRV-YPGRDHA---DPLFHDYKVFLNPSTTDVVCTTTAEALAMGKIVVCANH  332 (462)
T ss_pred             CCCeEEEEECCCccHHHHHHHHHhcCCcEEE-ECCCCCH---HHHHHhCCEEEECCCcccchHHHHHHHHcCCcEEEecC
Confidence            5789999999999999999999999886544 7887533   37999999999999999999999999999999999999


Q ss_pred             CCccccccCCceEEeCCCHHHHHHHHHHHHhcCCCCCHHHHHHHHHhcCCHHHHHHHHHHHHHH
Q 027511           82 GGVPEVLPDDMVVLAEPDPGDMVLAIRKAISLLPKIDPQVMHERMKKLYNWHDVAKRTEIVYDR  145 (222)
Q Consensus        82 gg~~e~i~~~~~g~~~~~~~~la~~i~~ll~~~~~~~~~~~~~~~~~~fs~~~~~~~~~~~~~~  145 (222)
                      ++ .+++.++.+++..+|++++++++.+++.++.....    ....+.|||+..++++.++|+-
T Consensus       333 ~~-~~~v~~~~ng~~~~~~~~~a~ai~~~l~~~~~~~~----~~a~~~~SWe~~~~~l~~~~~~  391 (462)
T PLN02846        333 PS-NEFFKQFPNCRTYDDGKGFVRATLKALAEEPAPLT----DAQRHELSWEAATERFLRVADL  391 (462)
T ss_pred             CC-cceeecCCceEecCCHHHHHHHHHHHHccCchhHH----HHHHHhCCHHHHHHHHHHHhcc
Confidence            98 59999999998889999999999999986432222    2234689999999999999974

>cd03821 GT1_Bme6_like This family is most closely related to the GT1 family of glycosyltransferases

Probab=99.89  E-value=1.2e-22  Score=172.39  Aligned_cols=139  Identities=21%  Similarity=0.319  Sum_probs=123.2

Q ss_pred             CCceEEEEEcCCcc--HHHHHHHHHHcCCCCcEEEeCCCChhHHHHHHHhccEEEEcCCCccccHHHHHHHHhCCcEEEe
Q 027511            2 RVKVRFIVGGDGPK--RVRLEEMREKHSLQDRVEMLGAVPHAQVRSVLISGHIFLNSSLTEAFCIAILEAASCGLLTVST   79 (222)
Q Consensus         2 ~p~~~lvi~G~g~~--~~~l~~~~~~~~l~~~V~~~g~v~~~~~~~ll~~adv~v~~s~~E~~g~~ilEAma~G~PvVa~   79 (222)
                      +|+++|+++|.++.  ...++.+++++++.++|.|+|+++++++..+|++||++++||..|+||++++|||+||+|||++
T Consensus       232 ~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~adv~v~ps~~e~~~~~~~Eama~G~PvI~~  311 (375)
T cd03821         232 FPDWHLVIAGPDEGGYRAELKQIAAALGLEDRVTFTGMLYGEDKAAALADADLFVLPSHSENFGIVVAEALACGTPVVTT  311 (375)
T ss_pred             cCCeEEEEECCCCcchHHHHHHHHHhcCccceEEEcCCCChHHHHHHHhhCCEEEeccccCCCCcHHHHHHhcCCCEEEc
Confidence            58999999997643  3555666688999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCccccccCCceEEeCCCHHHHHHHHHHHHhcCC--CCCHHHHHHHHHhcCCHHHHHHHHH
Q 027511           80 RVGGVPEVLPDDMVVLAEPDPGDMVLAIRKAISLLP--KIDPQVMHERMKKLYNWHDVAKRTE  140 (222)
Q Consensus        80 ~~gg~~e~i~~~~~g~~~~~~~~la~~i~~ll~~~~--~~~~~~~~~~~~~~fs~~~~~~~~~  140 (222)
                      +.||..+++.++...+..+++++++++|.+++++++  ..++.++++.+.++|+|+.+++++.
T Consensus       312 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~  374 (375)
T cd03821         312 DKVPWQELIEYGCGWVVDDDVDALAAALRRALELPQRLKAMGENGRALVEERFSWTAIAQQLL  374 (375)
T ss_pred             CCCCHHHHhhcCceEEeCCChHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhcCHHHHHHHhh
Confidence            999999999994444555677999999999999876  6778888888899999999999875

Bme6 in Brucella melitensis has been shown to be involved in the biosynthesis of a polysaccharide.

>PRK14098 glycogen synthase; Provisional

Probab=99.89  E-value=1.9e-22  Score=180.90  Aligned_cols=144  Identities=19%  Similarity=0.327  Sum_probs=120.3

Q ss_pred             CceEEEEEcCCcc--HHHHHHHHHHcCCCCcEEEeCCCChhHHHHHHHhccEEEEcCCCccccHHHHHHHHhCCcEEEeC
Q 027511            3 VKVRFIVGGDGPK--RVRLEEMREKHSLQDRVEMLGAVPHAQVRSVLISGHIFLNSSLTEAFCIAILEAASCGLLTVSTR   80 (222)
Q Consensus         3 p~~~lvi~G~g~~--~~~l~~~~~~~~l~~~V~~~g~v~~~~~~~ll~~adv~v~~s~~E~~g~~ilEAma~G~PvVa~~   80 (222)
                      ++++|+|+|+|+.  .+.++++++++  +++|.|+|.++.+++..+|+.||++|+||..|+||++.+|||+||+|+|+++
T Consensus       335 ~~~~lvivG~G~~~~~~~l~~l~~~~--~~~V~~~g~~~~~~~~~~~a~aDi~l~PS~~E~~Gl~~lEAma~G~ppVv~~  412 (489)
T PRK14098        335 LDIQLVICGSGDKEYEKRFQDFAEEH--PEQVSVQTEFTDAFFHLAIAGLDMLLMPGKIESCGMLQMFAMSYGTIPVAYA  412 (489)
T ss_pred             cCcEEEEEeCCCHHHHHHHHHHHHHC--CCCEEEEEecCHHHHHHHHHhCCEEEeCCCCCCchHHHHHHHhCCCCeEEec
Confidence            4789999999974  47888888876  4789999999999999999999999999999999999999999999999999


Q ss_pred             CCCccccccC----CceEEeC--CCHHHHHHHHHHHHhcCC--CCCHHHHHHHHHhcCCHHHHHHHHHHHHHHHhc
Q 027511           81 VGGVPEVLPD----DMVVLAE--PDPGDMVLAIRKAISLLP--KIDPQVMHERMKKLYNWHDVAKRTEIVYDRALE  148 (222)
Q Consensus        81 ~gg~~e~i~~----~~~g~~~--~~~~~la~~i~~ll~~~~--~~~~~~~~~~~~~~fs~~~~~~~~~~~~~~~~~  148 (222)
                      +||+.|++.+    +.+|+..  .|+++++++|.++++...  .......++...+.|||+.+++++.++|+++++
T Consensus       413 ~GGl~d~v~~~~~~~~~G~l~~~~d~~~la~ai~~~l~~~~~~~~~~~~~~~~~~~~fsw~~~a~~y~~lY~~~~~  488 (489)
T PRK14098        413 GGGIVETIEEVSEDKGSGFIFHDYTPEALVAKLGEALALYHDEERWEELVLEAMERDFSWKNSAEEYAQLYRELLG  488 (489)
T ss_pred             CCCCceeeecCCCCCCceeEeCCCCHHHHHHHHHHHHHHHcCHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHhc
Confidence            9999998864    4566543  389999999999875422  222333334456789999999999999998864

>TIGR02149 glgA_Coryne glycogen synthase, Corynebacterium family

Probab=99.89  E-value=1.9e-22  Score=174.89  Aligned_cols=145  Identities=21%  Similarity=0.374  Sum_probs=122.9

Q ss_pred             CceEEEEEcCCccH----HHHHHHHHHcCC-CCcEEEe-CCCChhHHHHHHHhccEEEEcCCCccccHHHHHHHHhCCcE
Q 027511            3 VKVRFIVGGDGPKR----VRLEEMREKHSL-QDRVEML-GAVPHAQVRSVLISGHIFLNSSLTEAFCIAILEAASCGLLT   76 (222)
Q Consensus         3 p~~~lvi~G~g~~~----~~l~~~~~~~~l-~~~V~~~-g~v~~~~~~~ll~~adv~v~~s~~E~~g~~ilEAma~G~Pv   76 (222)
                      ++++++++|+|+..    +++++.+..++. .++|.++ |.++.+++..+|+.||++|+||..|+||++++|||+||+||
T Consensus       228 ~~~~l~i~g~g~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~aDv~v~ps~~e~~g~~~lEA~a~G~Pv  307 (388)
T TIGR02149       228 KDVQVVLCAGAPDTPEVAEEVRQAVALLDRNRTGIIWINKMLPKEELVELLSNAEVFVCPSIYEPLGIVNLEAMACGTPV  307 (388)
T ss_pred             hcCcEEEEeCCCCcHHHHHHHHHHHHHhccccCceEEecCCCCHHHHHHHHHhCCEEEeCCccCCCChHHHHHHHcCCCE
Confidence            46788998877654    345555555554 2357764 67899999999999999999999999999999999999999


Q ss_pred             EEeCCCCccccccCCceEEeCC--CH------HHHHHHHHHHHhcCC--CCCHHHHHHHHHhcCCHHHHHHHHHHHHHHH
Q 027511           77 VSTRVGGVPEVLPDDMVVLAEP--DP------GDMVLAIRKAISLLP--KIDPQVMHERMKKLYNWHDVAKRTEIVYDRA  146 (222)
Q Consensus        77 Va~~~gg~~e~i~~~~~g~~~~--~~------~~la~~i~~ll~~~~--~~~~~~~~~~~~~~fs~~~~~~~~~~~~~~~  146 (222)
                      |+++.||.+|++.++.+|+..+  |+      ++++++|.+++++++  ..++.++++.+.++|||+.+++++.++|+++
T Consensus       308 I~s~~~~~~e~i~~~~~G~~~~~~~~~~~~~~~~l~~~i~~l~~~~~~~~~~~~~a~~~~~~~~s~~~~~~~~~~~y~~~  387 (388)
T TIGR02149       308 VASATGGIPEVVVDGETGFLVPPDNSDADGFQAELAKAINILLADPELAKKMGIAGRKRAEEEFSWGSIAKKTVEMYRKV  387 (388)
T ss_pred             EEeCCCCHHHHhhCCCceEEcCCCCCcccchHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhh
Confidence            9999999999999987776543  66      899999999999876  6678889999999999999999999999876


Q ss_pred             h
Q 027511          147 L  147 (222)
Q Consensus       147 ~  147 (222)
                      +
T Consensus       388 ~  388 (388)
T TIGR02149       388 L  388 (388)
T ss_pred             C
Confidence            3

This model describes Corynebacterium glutamicum GlgA and closely related proteins in several other species. This enzyme is required for glycogen biosynthesis and appears to replace the distantly related TIGR02095 family of ADP-glucose type glycogen synthase in Corynebacterium glutamicum, Mycobacterium tuberculosis, Bifidobacterium longum, and Streptomyces coelicolor.

>PLN02316 synthase/transferase

Probab=99.89  E-value=4.5e-22  Score=187.91  Aligned_cols=145  Identities=17%  Similarity=0.200  Sum_probs=123.9

Q ss_pred             CceEEEEEcCCcc---HHHHHHHHHHcCC--CCcEEEeCCCChhHHHHHHHhccEEEEcCCCccccHHHHHHHHhCCcEE
Q 027511            3 VKVRFIVGGDGPK---RVRLEEMREKHSL--QDRVEMLGAVPHAQVRSVLISGHIFLNSSLTEAFCIAILEAASCGLLTV   77 (222)
Q Consensus         3 p~~~lvi~G~g~~---~~~l~~~~~~~~l--~~~V~~~g~v~~~~~~~ll~~adv~v~~s~~E~~g~~ilEAma~G~PvV   77 (222)
                      ++++|+|+|+|+.   ...++++++++++  +++|.|.|..+......+|+.||+||+||.+|+||++.+|||+||+|+|
T Consensus       868 ~~~qlVIvG~Gpd~~~e~~l~~La~~Lg~~~~~rV~f~g~~de~lah~iyaaADiflmPS~~EP~GLvqLEAMa~GtppV  947 (1036)
T PLN02316        868 RNGQVVLLGSAPDPRIQNDFVNLANQLHSSHHDRARLCLTYDEPLSHLIYAGADFILVPSIFEPCGLTQLTAMRYGSIPV  947 (1036)
T ss_pred             cCcEEEEEeCCCCHHHHHHHHHHHHHhCccCCCeEEEEecCCHHHHHHHHHhCcEEEeCCcccCccHHHHHHHHcCCCeE
Confidence            4789999999975   4678888888865  6789998887555556899999999999999999999999999999999


Q ss_pred             EeCCCCccccccCC-------------ceEEeCC--CHHHHHHHHHHHHhcCC---CCCHHHHHHHHHhcCCHHHHHHHH
Q 027511           78 STRVGGVPEVLPDD-------------MVVLAEP--DPGDMVLAIRKAISLLP---KIDPQVMHERMKKLYNWHDVAKRT  139 (222)
Q Consensus        78 a~~~gg~~e~i~~~-------------~~g~~~~--~~~~la~~i~~ll~~~~---~~~~~~~~~~~~~~fs~~~~~~~~  139 (222)
                      ++++||++|+|.++             .+||..+  |+++++.+|.+++....   ..+...+++.+.+.|||+.++++|
T Consensus       948 vs~vGGL~DtV~d~d~~~~~~~~~g~~~tGflf~~~d~~aLa~AL~raL~~~~~~~~~~~~~~r~~m~~dFSW~~~A~~Y 1027 (1036)
T PLN02316        948 VRKTGGLFDTVFDVDHDKERAQAQGLEPNGFSFDGADAAGVDYALNRAISAWYDGRDWFNSLCKRVMEQDWSWNRPALDY 1027 (1036)
T ss_pred             EEcCCCcHhhccccccccccccccccCCceEEeCCCCHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHhhCCHHHHHHHH
Confidence            99999999999874             4676544  89999999999998742   345667777788899999999999


Q ss_pred             HHHHHHHh
Q 027511          140 EIVYDRAL  147 (222)
Q Consensus       140 ~~~~~~~~  147 (222)
                      +++|+.+.
T Consensus      1028 ~~LY~~a~ 1035 (1036)
T PLN02316       1028 MELYHSAR 1035 (1036)
T ss_pred             HHHHHHHh
Confidence            99999875

>cd03800 GT1_Sucrose_synthase This family is most closely related to the GT1 family of glycosyltransferases

Probab=99.89  E-value=2.1e-22  Score=174.45  Aligned_cols=139  Identities=27%  Similarity=0.462  Sum_probs=124.8

Q ss_pred             CCceEEEEEcCCccH------HHHHHHHHHcCCCCcEEEeCCCChhHHHHHHHhccEEEEcCCCccccHHHHHHHHhCCc
Q 027511            2 RVKVRFIVGGDGPKR------VRLEEMREKHSLQDRVEMLGAVPHAQVRSVLISGHIFLNSSLTEAFCIAILEAASCGLL   75 (222)
Q Consensus         2 ~p~~~lvi~G~g~~~------~~l~~~~~~~~l~~~V~~~g~v~~~~~~~ll~~adv~v~~s~~E~~g~~ilEAma~G~P   75 (222)
                      .|+++|+++|+++..      ..++.+++++++.++|.|+|+++.+++..+++.||++++||..|+||++++|||+||+|
T Consensus       249 ~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~adi~l~ps~~e~~~~~l~Ea~a~G~P  328 (398)
T cd03800         249 RERANLVIVGGPRDDILAMDEEELRELARELGVIDRVDFPGRVSREDLPALYRAADVFVNPALYEPFGLTALEAMACGLP  328 (398)
T ss_pred             CCCeEEEEEECCCCcchhhhhHHHHHHHHhcCCCceEEEeccCCHHHHHHHHHhCCEEEecccccccCcHHHHHHhcCCC
Confidence            478999999987542      44577888889989999999999999999999999999999999999999999999999


Q ss_pred             EEEeCCCCccccccCCceEEeCC--CHHHHHHHHHHHHhcCC--CCCHHHHHHHHHhcCCHHHHHHHHH
Q 027511           76 TVSTRVGGVPEVLPDDMVVLAEP--DPGDMVLAIRKAISLLP--KIDPQVMHERMKKLYNWHDVAKRTE  140 (222)
Q Consensus        76 vVa~~~gg~~e~i~~~~~g~~~~--~~~~la~~i~~ll~~~~--~~~~~~~~~~~~~~fs~~~~~~~~~  140 (222)
                      ||+++.+|..|++.++.+|+..+  |+++++++|.+++++++  ..++.++++.+.+.|||+.+++++.
T Consensus       329 vi~s~~~~~~e~i~~~~~g~~~~~~~~~~l~~~i~~l~~~~~~~~~~~~~a~~~~~~~~s~~~~~~~~~  397 (398)
T cd03800         329 VVATAVGGPRDIVVDGVTGLLVDPRDPEALAAALRRLLTDPALRRRLSRAGLRRARARYTWERVAARLL  397 (398)
T ss_pred             EEECCCCCHHHHccCCCCeEEeCCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhCCHHHHHHHHh
Confidence            99999999999999987776543  89999999999999876  6688889999999999999999875

The sucrose-phosphate synthases in this family may be unique to plants and photosynthetic bacteria. This enzyme catalyzes the synthesis of sucrose 6-phosphate from fructose 6-phosphate and uridine 5'-diphosphate-glucose, a key regulatory step of sucrose metabolism. The activity of this enzyme is regulated by phosphorylation and moderated by the concentration of various metabolites and light.

>cd03799 GT1_amsK_like This is a family of GT1 glycosyltransferases found specifically in certain bacteria

Probab=99.88  E-value=2.6e-22  Score=170.99  Aligned_cols=137  Identities=31%  Similarity=0.490  Sum_probs=126.6

Q ss_pred             CCceEEEEEcCCccHHHHHHHHHHcCCCCcEEEeCCCChhHHHHHHHhccEEEEcCCC------ccccHHHHHHHHhCCc
Q 027511            2 RVKVRFIVGGDGPKRVRLEEMREKHSLQDRVEMLGAVPHAQVRSVLISGHIFLNSSLT------EAFCIAILEAASCGLL   75 (222)
Q Consensus         2 ~p~~~lvi~G~g~~~~~l~~~~~~~~l~~~V~~~g~v~~~~~~~ll~~adv~v~~s~~------E~~g~~ilEAma~G~P   75 (222)
                      .|+++|+++|+|+...++++.++++++.++|.++|+++.+++..+|++||++++||..      |+||++++|||+||+|
T Consensus       208 ~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~l~~~~~~adi~l~~s~~~~~~~~e~~~~~~~Ea~a~G~P  287 (355)
T cd03799         208 GIDFRLDIVGDGPLRDELEALIAELGLEDRVTLLGAKSQEEVRELLRAADLFVLPSVTAADGDREGLPVVLMEAMAMGLP  287 (355)
T ss_pred             CCCeEEEEEECCccHHHHHHHHHHcCCCCeEEECCcCChHHHHHHHHhCCEEEecceecCCCCccCccHHHHHHHHcCCC
Confidence            4789999999999999999999999999999999999999999999999999999998      9999999999999999


Q ss_pred             EEEeCCCCccccccCCceEEe-CC-CHHHHHHHHHHHHhcCC--CCCHHHHHHHHHhcCCHHHHHHH
Q 027511           76 TVSTRVGGVPEVLPDDMVVLA-EP-DPGDMVLAIRKAISLLP--KIDPQVMHERMKKLYNWHDVAKR  138 (222)
Q Consensus        76 vVa~~~gg~~e~i~~~~~g~~-~~-~~~~la~~i~~ll~~~~--~~~~~~~~~~~~~~fs~~~~~~~  138 (222)
                      ||+++.|+..+++.++.+|+. .+ |+++++++|.++++++.  ..++.++++.+.+.|+|+.++++
T Consensus       288 vi~~~~~~~~~~i~~~~~g~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~a~~~~~~~~s~~~~~~~  354 (355)
T cd03799         288 VISTDVSGIPELVEDGETGLLVPPGDPEALADAIERLLDDPELRREMGEAGRARVEEEFDIRKQAAR  354 (355)
T ss_pred             EEecCCCCcchhhhCCCceEEeCCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhcCHHHHhhc
Confidence            999999999999999866654 33 89999999999999877  67788899999999999998875

amsK in Erwinia amylovora, has been reported to be involved in the biosynthesis of amylovoran, a exopolysaccharide acting as a virulence factor.

>cd03807 GT1_WbnK_like This family is most closely related to the GT1 family of glycosyltransferases

Probab=99.88  E-value=4e-22  Score=168.59  Aligned_cols=141  Identities=29%  Similarity=0.443  Sum_probs=127.0

Q ss_pred             CCceEEEEEcCCccHHHHHHHHH-HcCCCCcEEEeCCCChhHHHHHHHhccEEEEcCCCccccHHHHHHHHhCCcEEEeC
Q 027511            2 RVKVRFIVGGDGPKRVRLEEMRE-KHSLQDRVEMLGAVPHAQVRSVLISGHIFLNSSLTEAFCIAILEAASCGLLTVSTR   80 (222)
Q Consensus         2 ~p~~~lvi~G~g~~~~~l~~~~~-~~~l~~~V~~~g~v~~~~~~~ll~~adv~v~~s~~E~~g~~ilEAma~G~PvVa~~   80 (222)
                      +|+++|+++|.++.....+.... ++++.++|.++|..  +++..+|+.||++++||..|++|++++|||+||+|||+++
T Consensus       222 ~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~~v~~~g~~--~~~~~~~~~adi~v~ps~~e~~~~~~~Ea~a~g~PvI~~~  299 (365)
T cd03807         222 FPNARLLLVGDGPDRANLELLALKELGLEDKVILLGER--SDVPALLNALDVFVLSSLSEGFPNVLLEAMACGLPVVATD  299 (365)
T ss_pred             CCCeEEEEecCCcchhHHHHHHHHhcCCCceEEEcccc--ccHHHHHHhCCEEEeCCccccCCcHHHHHHhcCCCEEEcC
Confidence            57899999999998888888887 88899999999974  7899999999999999999999999999999999999999


Q ss_pred             CCCccccccCCceEEeCCCHHHHHHHHHHHHhcCC--CCCHHHHHHHHHhcCCHHHHHHHHHHHHH
Q 027511           81 VGGVPEVLPDDMVVLAEPDPGDMVLAIRKAISLLP--KIDPQVMHERMKKLYNWHDVAKRTEIVYD  144 (222)
Q Consensus        81 ~gg~~e~i~~~~~g~~~~~~~~la~~i~~ll~~~~--~~~~~~~~~~~~~~fs~~~~~~~~~~~~~  144 (222)
                      .|+..|++.+.+..+...|+++++++|.+++++++  ..++.++++.+.++|||+.+++++.++|+
T Consensus       300 ~~~~~e~~~~~g~~~~~~~~~~l~~~i~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~y~  365 (365)
T cd03807         300 VGDNAELVGDTGFLVPPGDPEALAEAIEALLADPALRQALGEAARERIEENFSIEAMVEAYEELYR  365 (365)
T ss_pred             CCChHHHhhcCCEEeCCCCHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHhC
Confidence            99999999983333445589999999999999876  66788899999999999999999999884

WbnK in Shigella dysenteriae has been shown to be involved in the type 7 O-antigen biosynthesis.

>cd03801 GT1_YqgM_like This family is most closely related to the GT1 family of glycosyltransferases and named after YqgM in Bacillus licheniformis about which little is known

Probab=99.88  E-value=3.9e-22  Score=167.94  Aligned_cols=143  Identities=36%  Similarity=0.575  Sum_probs=130.7

Q ss_pred             CCceEEEEEcCCccHHHHHHHHHHcCCCCcEEEeCCCChhHHHHHHHhccEEEEcCCCccccHHHHHHHHhCCcEEEeCC
Q 027511            2 RVKVRFIVGGDGPKRVRLEEMREKHSLQDRVEMLGAVPHAQVRSVLISGHIFLNSSLTEAFCIAILEAASCGLLTVSTRV   81 (222)
Q Consensus         2 ~p~~~lvi~G~g~~~~~l~~~~~~~~l~~~V~~~g~v~~~~~~~ll~~adv~v~~s~~E~~g~~ilEAma~G~PvVa~~~   81 (222)
                      +|+++|+++|+++....+++.+++++..++|.++|+++.+++..+|++||++++|+..|++|++++|||++|+|||+++.
T Consensus       228 ~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~~di~i~~~~~~~~~~~~~Ea~~~g~pvI~~~~  307 (374)
T cd03801         228 YPDVRLVIVGDGPLREELEALAAELGLGDRVTFLGFVPDEDLPALYAAADVFVLPSLYEGFGLVLLEAMAAGLPVVASDV  307 (374)
T ss_pred             cCCeEEEEEeCcHHHHHHHHHHHHhCCCcceEEEeccChhhHHHHHHhcCEEEecchhccccchHHHHHHcCCcEEEeCC
Confidence            47899999999999999999998999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCccccccCCceEEeCC--CHHHHHHHHHHHHhcCC--CCCHHHHHHHHHhcCCHHHHHHHHHHHHH
Q 027511           82 GGVPEVLPDDMVVLAEP--DPGDMVLAIRKAISLLP--KIDPQVMHERMKKLYNWHDVAKRTEIVYD  144 (222)
Q Consensus        82 gg~~e~i~~~~~g~~~~--~~~~la~~i~~ll~~~~--~~~~~~~~~~~~~~fs~~~~~~~~~~~~~  144 (222)
                      ++..|++.++..|+..+  |+++++++|.+++++++  ..+..++++.+.+.|+|+.+++++.++|+
T Consensus       308 ~~~~~~~~~~~~g~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  374 (374)
T cd03801         308 GGIPEVVEDGETGLLVPPGDPEALAEAILRLLDDPELRRRLGEAARERVAERFSWDRVAARTEEVYY  374 (374)
T ss_pred             CChhHHhcCCcceEEeCCCCHHHHHHHHHHHHcChHHHHHHHHHHHHHHHHhcCHHHHHHHHHHhhC
Confidence            99999999777765433  68999999999999877  66777788889999999999999998873

Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold.

>PRK00654 glgA glycogen synthase; Provisional

Probab=99.88  E-value=6.7e-22  Score=176.56  Aligned_cols=143  Identities=20%  Similarity=0.314  Sum_probs=115.8

Q ss_pred             CceEEEEEcCCcc--HHHHHHHHHHcCCCCcEEE-eCCCChhHHHHHHHhccEEEEcCCCccccHHHHHHHHhCCcEEEe
Q 027511            3 VKVRFIVGGDGPK--RVRLEEMREKHSLQDRVEM-LGAVPHAQVRSVLISGHIFLNSSLTEAFCIAILEAASCGLLTVST   79 (222)
Q Consensus         3 p~~~lvi~G~g~~--~~~l~~~~~~~~l~~~V~~-~g~v~~~~~~~ll~~adv~v~~s~~E~~g~~ilEAma~G~PvVa~   79 (222)
                      ++++|+|+|+|+.  .+++++++++++  +++.+ .|+ +.+.+..+|+.||++|+||.+|+||++++|||+||+|||++
T Consensus       310 ~~~~lvivG~g~~~~~~~l~~l~~~~~--~~v~~~~g~-~~~~~~~~~~~aDv~v~PS~~E~~gl~~lEAma~G~p~V~~  386 (466)
T PRK00654        310 QGGQLVLLGTGDPELEEAFRALAARYP--GKVGVQIGY-DEALAHRIYAGADMFLMPSRFEPCGLTQLYALRYGTLPIVR  386 (466)
T ss_pred             cCCEEEEEecCcHHHHHHHHHHHHHCC--CcEEEEEeC-CHHHHHHHHhhCCEEEeCCCCCCchHHHHHHHHCCCCEEEe
Confidence            3789999999864  467888888876  45665 555 66677899999999999999999999999999999999999


Q ss_pred             CCCCccccccCC------ceEEeC--CCHHHHHHHHHHHHhcCC--CCCHHHHHHHHHhcCCHHHHHHHHHHHHHHHhc
Q 027511           80 RVGGVPEVLPDD------MVVLAE--PDPGDMVLAIRKAISLLP--KIDPQVMHERMKKLYNWHDVAKRTEIVYDRALE  148 (222)
Q Consensus        80 ~~gg~~e~i~~~------~~g~~~--~~~~~la~~i~~ll~~~~--~~~~~~~~~~~~~~fs~~~~~~~~~~~~~~~~~  148 (222)
                      ++||+.|++.++      .+|+..  .|+++++++|.++++...  ........+..++.|||+.+++++.++|+++++
T Consensus       387 ~~gG~~e~v~~~~~~~~~~~G~lv~~~d~~~la~~i~~~l~~~~~~~~~~~~~~~~~~~~fsw~~~a~~~~~lY~~~~~  465 (466)
T PRK00654        387 RTGGLADTVIDYNPEDGEATGFVFDDFNAEDLLRALRRALELYRQPPLWRALQRQAMAQDFSWDKSAEEYLELYRRLLG  465 (466)
T ss_pred             CCCCccceeecCCCCCCCCceEEeCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHhccCCChHHHHHHHHHHHHHHhh
Confidence            999999999887      667543  389999999999987432  112222233345789999999999999998764

>PHA01630 putative group 1 glycosyl transferase

Probab=99.88  E-value=7.4e-22  Score=168.93  Aligned_cols=135  Identities=21%  Similarity=0.268  Sum_probs=111.5

Q ss_pred             CCceEEEEEcCCccHHHHHHHHHHcCCCCcEEEeCCCChhHHHHHHHhccEEEEcCCCccccHHHHHHHHhCCcEEEeCC
Q 027511            2 RVKVRFIVGGDGPKRVRLEEMREKHSLQDRVEMLGAVPHAQVRSVLISGHIFLNSSLTEAFCIAILEAASCGLLTVSTRV   81 (222)
Q Consensus         2 ~p~~~lvi~G~g~~~~~l~~~~~~~~l~~~V~~~g~v~~~~~~~ll~~adv~v~~s~~E~~g~~ilEAma~G~PvVa~~~   81 (222)
                      .++++++|+|++.....+      .++.+   +.|.++++++..+|+.||++++||..|+||++++||||||+|||+|+.
T Consensus       171 ~~~~~llivG~~~~~~~l------~~~~~---~~~~v~~~~l~~~y~~aDv~v~pS~~E~fgl~~lEAMA~G~PVIas~~  241 (331)
T PHA01630        171 GYDFYFLIKSSNMLDPRL------FGLNG---VKTPLPDDDIYSLFAGCDILFYPVRGGAFEIPVIEALALGLDVVVTEK  241 (331)
T ss_pred             CCCEEEEEEeCcccchhh------ccccc---eeccCCHHHHHHHHHhCCEEEECCccccCChHHHHHHHcCCCEEEeCC
Confidence            478999999976543321      12222   356789999999999999999999999999999999999999999999


Q ss_pred             CCccccccCCceEEe---------------------CCCHHHHHHHHHHHHhcC--C--CCCHHHHHHHHHhcCCHHHHH
Q 027511           82 GGVPEVLPDDMVVLA---------------------EPDPGDMVLAIRKAISLL--P--KIDPQVMHERMKKLYNWHDVA  136 (222)
Q Consensus        82 gg~~e~i~~~~~g~~---------------------~~~~~~la~~i~~ll~~~--~--~~~~~~~~~~~~~~fs~~~~~  136 (222)
                      ||..|++.++.+|+.                     ++|.+++++++.+++.++  +  +.+..++.....++|||+.++
T Consensus       242 gg~~E~i~~~~ng~lv~~~~~~~~~~~~~~~~G~~v~~~~~~~~~~ii~~l~~~~~~~~~~~~~~~~~~~~~~fs~~~ia  321 (331)
T PHA01630        242 GAWSEWVLSNLDVYWIKSGRKPKLWYTNPIHVGYFLDPDIEDAYQKLLEALANWTPEKKKENLEGRAILYRENYSYNAIA  321 (331)
T ss_pred             CCchhhccCCCceEEeeecccccccccCCcccccccCCCHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhCCHHHHH
Confidence            999999998865432                     458899999999999875  2  455666777788999999999


Q ss_pred             HHHHHHHHH
Q 027511          137 KRTEIVYDR  145 (222)
Q Consensus       137 ~~~~~~~~~  145 (222)
                      ++++++|++
T Consensus       322 ~k~~~l~~~  330 (331)
T PHA01630        322 KMWEKILEK  330 (331)
T ss_pred             HHHHHHHhc
Confidence            999999964

>cd04949 GT1_gtfA_like This family is most closely related to the GT1 family of glycosyltransferases and is named after gtfA in Streptococcus gordonii, where it plays a role in the O-linked glycosylation of GspB, a cell surface glycoprotein involved in platelet binding

Probab=99.88  E-value=1.9e-22  Score=174.18  Aligned_cols=135  Identities=23%  Similarity=0.255  Sum_probs=122.3

Q ss_pred             CCceEEEEEcCCccHHHHHHHHHHcCCCCcEEEeCCCChhHHHHHHHhccEEEEcCCCccccHHHHHHHHhCCcEEEeCC
Q 027511            2 RVKVRFIVGGDGPKRVRLEEMREKHSLQDRVEMLGAVPHAQVRSVLISGHIFLNSSLTEAFCIAILEAASCGLLTVSTRV   81 (222)
Q Consensus         2 ~p~~~lvi~G~g~~~~~l~~~~~~~~l~~~V~~~g~v~~~~~~~ll~~adv~v~~s~~E~~g~~ilEAma~G~PvVa~~~   81 (222)
                      +|+++|+|+|.|+....+.++++++++.++|.|.|+  .+++..+|+.||++|+||..|+||++++|||+||+|||+++.
T Consensus       233 ~~~~~l~i~G~g~~~~~~~~~~~~~~~~~~v~~~g~--~~~~~~~~~~ad~~v~~S~~Eg~~~~~lEAma~G~PvI~~~~  310 (372)
T cd04949         233 VPDATLDIYGYGDEEEKLKELIEELGLEDYVFLKGY--TRDLDEVYQKAQLSLLTSQSEGFGLSLMEALSHGLPVISYDV  310 (372)
T ss_pred             CCCcEEEEEEeCchHHHHHHHHHHcCCcceEEEcCC--CCCHHHHHhhhhEEEecccccccChHHHHHHhCCCCEEEecC
Confidence            689999999999999999999999999999999995  578999999999999999999999999999999999999998


Q ss_pred             C-CccccccCCceEEeCC--CHHHHHHHHHHHHhcCC--CCCHHHHHHHHHhcCCHHHHHHHH
Q 027511           82 G-GVPEVLPDDMVVLAEP--DPGDMVLAIRKAISLLP--KIDPQVMHERMKKLYNWHDVAKRT  139 (222)
Q Consensus        82 g-g~~e~i~~~~~g~~~~--~~~~la~~i~~ll~~~~--~~~~~~~~~~~~~~fs~~~~~~~~  139 (222)
                      + |..+++.++.+|+..+  |+++++++|.+++++++  ..++.++++. .++|||+.++++|
T Consensus       311 ~~g~~~~v~~~~~G~lv~~~d~~~la~~i~~ll~~~~~~~~~~~~a~~~-~~~~s~~~~~~~w  372 (372)
T cd04949         311 NYGPSEIIEDGENGYLVPKGDIEALAEAIIELLNDPKLLQKFSEAAYEN-AERYSEENVWEKW  372 (372)
T ss_pred             CCCcHHHcccCCCceEeCCCcHHHHHHHHHHHHcCHHHHHHHHHHHHHH-HHHhhHHHHHhcC
Confidence            7 8999999988886655  89999999999999876  6677777777 6789999998764

In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltra

>cd03798 GT1_wlbH_like This family is most closely related to the GT1 family of glycosyltransferases

Probab=99.88  E-value=9.9e-22  Score=166.15  Aligned_cols=144  Identities=35%  Similarity=0.576  Sum_probs=132.5

Q ss_pred             CCceEEEEEcCCccHHHHHHHHHHcCCCCcEEEeCCCChhHHHHHHHhccEEEEcCCCccccHHHHHHHHhCCcEEEeCC
Q 027511            2 RVKVRFIVGGDGPKRVRLEEMREKHSLQDRVEMLGAVPHAQVRSVLISGHIFLNSSLTEAFCIAILEAASCGLLTVSTRV   81 (222)
Q Consensus         2 ~p~~~lvi~G~g~~~~~l~~~~~~~~l~~~V~~~g~v~~~~~~~ll~~adv~v~~s~~E~~g~~ilEAma~G~PvVa~~~   81 (222)
                      +|+++++++|.++....+++.++++++.++|.++|+++++++..++++||++++|+..|++|++++|||++|+|||+++.
T Consensus       231 ~~~~~l~i~g~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~ad~~i~~~~~~~~~~~~~Ea~~~G~pvI~~~~  310 (377)
T cd03798         231 RPDVHLVIVGDGPLREALEALAAELGLEDRVTFLGAVPHEEVPAYYAAADVFVLPSLREGFGLVLLEAMACGLPVVATDV  310 (377)
T ss_pred             CCCeEEEEEcCCcchHHHHHHHHhcCCcceEEEeCCCCHHHHHHHHHhcCeeecchhhccCChHHHHHHhcCCCEEEecC
Confidence            47899999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCccccccCCceEEe--CCCHHHHHHHHHHHHhcCCCCCHHHHHHHHHhcCCHHHHHHHHHHHHHH
Q 027511           82 GGVPEVLPDDMVVLA--EPDPGDMVLAIRKAISLLPKIDPQVMHERMKKLYNWHDVAKRTEIVYDR  145 (222)
Q Consensus        82 gg~~e~i~~~~~g~~--~~~~~~la~~i~~ll~~~~~~~~~~~~~~~~~~fs~~~~~~~~~~~~~~  145 (222)
                      |+..+++.++..|+.  ..|+++++++|.++++++...+..++++.+.+.|+|+.+++++.++|++
T Consensus       311 ~~~~~~~~~~~~g~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~  376 (377)
T cd03798         311 GGIPEIITDGENGLLVPPGDPEALAEAILRLLADPWLRLGRAARRRVAERFSWENVAERLLELYRE  376 (377)
T ss_pred             CChHHHhcCCcceeEECCCCHHHHHHHHHHHhcCcHHHHhHHHHHHHHHHhhHHHHHHHHHHHHhh
Confidence            999999999987643  3489999999999998865456788888999999999999999999875

wlbH in Bordetella parapertussis has been shown to be required for the biosynthesis of a trisaccharide that, when attached to the B. pertussis lipopolysaccharide (LPS) core (band B), generates band A LPS.

>cd03816 GT1_ALG1_like This family is most closely related to the GT1 family of glycosyltransferases

Probab=99.88  E-value=8.9e-22  Score=173.38  Aligned_cols=135  Identities=14%  Similarity=0.140  Sum_probs=114.6

Q ss_pred             CCceEEEEEcCCccHHHHHHHHHHcCCCCcEEEeCCCChhHHHHHHHhccEEEEcCC---CccccHHHHHHHHhCCcEEE
Q 027511            2 RVKVRFIVGGDGPKRVRLEEMREKHSLQDRVEMLGAVPHAQVRSVLISGHIFLNSSL---TEAFCIAILEAASCGLLTVS   78 (222)
Q Consensus         2 ~p~~~lvi~G~g~~~~~l~~~~~~~~l~~~V~~~g~v~~~~~~~ll~~adv~v~~s~---~E~~g~~ilEAma~G~PvVa   78 (222)
                      +|+++|+|+|+|+.+++++++++++++.+.+.+.|+++.+++..+|+.||+++.++.   .|++|++++||||||+|||+
T Consensus       267 ~~~i~l~ivG~G~~~~~l~~~~~~~~l~~~~~~~g~~~~~~~~~~l~~aDv~v~~~~~~~~~~~p~~~~Eama~G~PVI~  346 (415)
T cd03816         267 LPKLLCIITGKGPLKEKYLERIKELKLKKVTIRTPWLSAEDYPKLLASADLGVSLHTSSSGLDLPMKVVDMFGCGLPVCA  346 (415)
T ss_pred             CCCEEEEEEecCccHHHHHHHHHHcCCCcEEEEcCcCCHHHHHHHHHhCCEEEEccccccccCCcHHHHHHHHcCCCEEE
Confidence            478999999999999999999999999765555678999999999999999986432   47899999999999999999


Q ss_pred             eCCCCccccccCCceEEeCCCHHHHHHHHHHHHhc---CC--CCCHHHHHHHHHhcCCHHHHHHH
Q 027511           79 TRVGGVPEVLPDDMVVLAEPDPGDMVLAIRKAISL---LP--KIDPQVMHERMKKLYNWHDVAKR  138 (222)
Q Consensus        79 ~~~gg~~e~i~~~~~g~~~~~~~~la~~i~~ll~~---~~--~~~~~~~~~~~~~~fs~~~~~~~  138 (222)
                      ++.||.+|++.++.+|+..+|+++++++|.+++++   ++  ..++.++++..  .++|+....+
T Consensus       347 s~~~~~~eiv~~~~~G~lv~d~~~la~~i~~ll~~~~~~~~~~~m~~~~~~~~--~~~~~~~~~~  409 (415)
T cd03816         347 LDFKCIDELVKHGENGLVFGDSEELAEQLIDLLSNFPNRGKLNSLKKGAQEES--ELRWDENWDR  409 (415)
T ss_pred             eCCCCHHHHhcCCCCEEEECCHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHhh--hcCHHHHHHH
Confidence            99999999999998888778999999999999998   54  55666666554  4555554443

The yeast gene ALG1 has been shown to function as a mannosyltransferase that catalyzes the formation of dolichol pyrophosphate (Dol-PP)-GlcNAc2Man from GDP-Man and Dol-PP-Glc-NAc2, and participates in the formation of the lipid-linked precursor oligosaccharide for N-glycosylation. In humans ALG1 has been associated with the congenital disorders of glycosylation (CDG) designated as subtype CDG-Ik.

>cd03825 GT1_wcfI_like This family is most closely related to the GT1 family of glycosyltransferases

Probab=99.87  E-value=9.9e-22  Score=168.05  Aligned_cols=137  Identities=21%  Similarity=0.324  Sum_probs=121.6

Q ss_pred             CCceEEEEEcCCccHHHHHHHHHHcCCCCcEEEeCCCC-hhHHHHHHHhccEEEEcCCCccccHHHHHHHHhCCcEEEeC
Q 027511            2 RVKVRFIVGGDGPKRVRLEEMREKHSLQDRVEMLGAVP-HAQVRSVLISGHIFLNSSLTEAFCIAILEAASCGLLTVSTR   80 (222)
Q Consensus         2 ~p~~~lvi~G~g~~~~~l~~~~~~~~l~~~V~~~g~v~-~~~~~~ll~~adv~v~~s~~E~~g~~ilEAma~G~PvVa~~   80 (222)
                      .++++++++|+++.....       ++.++|.++|+++ .+++..+|+.||++++||..|+||++++|||+||+|||+++
T Consensus       223 ~~~~~~~i~G~~~~~~~~-------~~~~~v~~~g~~~~~~~~~~~~~~ad~~l~ps~~e~~g~~~~Eam~~g~PvI~~~  295 (365)
T cd03825         223 KDDIELVVFGASDPEIPP-------DLPFPVHYLGSLNDDESLALIYSAADVFVVPSLQENFPNTAIEALACGTPVVAFD  295 (365)
T ss_pred             CCCeEEEEeCCCchhhhc-------cCCCceEecCCcCCHHHHHHHHHhCCEEEeccccccccHHHHHHHhcCCCEEEec
Confidence            478999999988654321       4567899999998 78899999999999999999999999999999999999999


Q ss_pred             CCCccccccCCceEEeCC--CHHHHHHHHHHHHhcCC--CCCHHHHHHHHHhcCCHHHHHHHHHHHHHH
Q 027511           81 VGGVPEVLPDDMVVLAEP--DPGDMVLAIRKAISLLP--KIDPQVMHERMKKLYNWHDVAKRTEIVYDR  145 (222)
Q Consensus        81 ~gg~~e~i~~~~~g~~~~--~~~~la~~i~~ll~~~~--~~~~~~~~~~~~~~fs~~~~~~~~~~~~~~  145 (222)
                      .|+..|++.++.+|+..+  |+++++++|.+++++++  ..++.++++.+.+.|||+.+++++.++|++
T Consensus       296 ~~~~~e~~~~~~~g~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~y~~  364 (365)
T cd03825         296 VGGIPDIVDHGVTGYLAKPGDPEDLAEGIEWLLADPDEREELGEAARELAENEFDSRVQAKRYLSLYEE  364 (365)
T ss_pred             CCCChhheeCCCceEEeCCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhh
Confidence            999999999987765443  79999999999999876  667888888999999999999999999976

wcfI in Bacteroides fragilis has been shown to be involved in the capsular polysaccharide biosynthesis.

>cd03795 GT1_like_4 This family is most closely related to the GT1 family of glycosyltransferases

Probab=99.87  E-value=6.8e-22  Score=168.58  Aligned_cols=133  Identities=25%  Similarity=0.370  Sum_probs=121.8

Q ss_pred             ceEEEEEcCCccHHHHHHHHHHcCCCCcEEEeCCCChhHHHHHHHhccEEEEcCC--CccccHHHHHHHHhCCcEEEeCC
Q 027511            4 KVRFIVGGDGPKRVRLEEMREKHSLQDRVEMLGAVPHAQVRSVLISGHIFLNSSL--TEAFCIAILEAASCGLLTVSTRV   81 (222)
Q Consensus         4 ~~~lvi~G~g~~~~~l~~~~~~~~l~~~V~~~g~v~~~~~~~ll~~adv~v~~s~--~E~~g~~ilEAma~G~PvVa~~~   81 (222)
                      +++|+|+|+|+....++++++++++.++|.|+|+++++++..++++||++++||.  .|+||++++|||+||+|||+++.
T Consensus       218 ~~~l~i~G~g~~~~~~~~~~~~~~~~~~V~~~g~v~~~~~~~~~~~ad~~i~ps~~~~e~~g~~~~Ea~~~g~Pvi~~~~  297 (357)
T cd03795         218 DAPLVIVGEGPLEAELEALAAALGLLDRVRFLGRLDDEEKAALLAACDVFVFPSVERSEAFGIVLLEAMAFGKPVISTEI  297 (357)
T ss_pred             CcEEEEEeCChhHHHHHHHHHhcCCcceEEEcCCCCHHHHHHHHHhCCEEEeCCcccccccchHHHHHHHcCCCEEecCC
Confidence            6899999999999999999989999999999999999999999999999999986  69999999999999999999999


Q ss_pred             CCccccccC-CceEEeC--CCHHHHHHHHHHHHhcCC--CCCHHHHHHHHHhcCCHHHHH
Q 027511           82 GGVPEVLPD-DMVVLAE--PDPGDMVLAIRKAISLLP--KIDPQVMHERMKKLYNWHDVA  136 (222)
Q Consensus        82 gg~~e~i~~-~~~g~~~--~~~~~la~~i~~ll~~~~--~~~~~~~~~~~~~~fs~~~~~  136 (222)
                      |+..+.+.+ +.+|+..  .|+++++++|.+++++++  ..++.++++.+.++|||+.++
T Consensus       298 ~~~~~~i~~~~~~g~~~~~~d~~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~~  357 (357)
T cd03795         298 GTGGSYVNLHGVTGLVVPPGDPAALAEAIRRLLEDPELRERLGEAARERAEEEFTADRMV  357 (357)
T ss_pred             CCchhHHhhCCCceEEeCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHhcchHhhC
Confidence            999998886 6666543  389999999999999877  778899999999999999863

Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP-linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog

>PRK14099 glycogen synthase; Provisional

Probab=99.87  E-value=1.1e-21  Score=175.73  Aligned_cols=141  Identities=16%  Similarity=0.224  Sum_probs=113.7

Q ss_pred             CceEEEEEcCCcc--HHHHHHHHHHcCCCCcE-EEeCCCChhHHHHHH-HhccEEEEcCCCccccHHHHHHHHhCCcEEE
Q 027511            3 VKVRFIVGGDGPK--RVRLEEMREKHSLQDRV-EMLGAVPHAQVRSVL-ISGHIFLNSSLTEAFCIAILEAASCGLLTVS   78 (222)
Q Consensus         3 p~~~lvi~G~g~~--~~~l~~~~~~~~l~~~V-~~~g~v~~~~~~~ll-~~adv~v~~s~~E~~g~~ilEAma~G~PvVa   78 (222)
                      ++++|+|+|+|+.  .+++++++++++  +++ .|+|+  ++++..++ +.||+||+||.+|+||++.+|||+||+|+|+
T Consensus       323 ~~~~lvivG~G~~~~~~~l~~l~~~~~--~~v~~~~G~--~~~l~~~~~a~aDifv~PS~~E~fGl~~lEAma~G~ppVv  398 (485)
T PRK14099        323 EGAQLALLGSGDAELEARFRAAAQAYP--GQIGVVIGY--DEALAHLIQAGADALLVPSRFEPCGLTQLCALRYGAVPVV  398 (485)
T ss_pred             cCcEEEEEecCCHHHHHHHHHHHHHCC--CCEEEEeCC--CHHHHHHHHhcCCEEEECCccCCCcHHHHHHHHCCCCcEE
Confidence            4689999999863  577888887764  455 68998  68888887 4699999999999999999999999999999


Q ss_pred             eCCCCccccccCC---------ceEEeC--CCHHHHHHHHHH---HHhcCC--CCCHHHHHHHHHhcCCHHHHHHHHHHH
Q 027511           79 TRVGGVPEVLPDD---------MVVLAE--PDPGDMVLAIRK---AISLLP--KIDPQVMHERMKKLYNWHDVAKRTEIV  142 (222)
Q Consensus        79 ~~~gg~~e~i~~~---------~~g~~~--~~~~~la~~i~~---ll~~~~--~~~~~~~~~~~~~~fs~~~~~~~~~~~  142 (222)
                      +++||++|++.++         .+|+..  .|+++++++|.+   +++++.  +.++.++   ..+.|||+.++++++++
T Consensus       399 s~~GGl~d~V~~~~~~~~~~~~~~G~l~~~~d~~~La~ai~~a~~l~~d~~~~~~l~~~~---~~~~fSw~~~a~~y~~l  475 (485)
T PRK14099        399 ARVGGLADTVVDANEMAIATGVATGVQFSPVTADALAAALRKTAALFADPVAWRRLQRNG---MTTDVSWRNPAQHYAAL  475 (485)
T ss_pred             eCCCCccceeecccccccccCCCceEEeCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHh---hhhcCChHHHHHHHHHH
Confidence            9999999999765         456543  389999999998   444443  3334333   35789999999999999


Q ss_pred             HHHHhcCC
Q 027511          143 YDRALECP  150 (222)
Q Consensus       143 ~~~~~~~~  150 (222)
                      |++++...
T Consensus       476 Y~~l~~~~  483 (485)
T PRK14099        476 YRSLVAER  483 (485)
T ss_pred             HHHHHhhh
Confidence            99987643

>cd03822 GT1_ecORF704_like This family is most closely related to the GT1 family of glycosyltransferases

Probab=99.87  E-value=1.1e-21  Score=167.11  Aligned_cols=141  Identities=21%  Similarity=0.273  Sum_probs=120.0

Q ss_pred             CCceEEEEEcCCccHHHHHH-----HHHHcCCCCcEEEeCC-CChhHHHHHHHhccEEEEcCCCc--cccHHHHHHHHhC
Q 027511            2 RVKVRFIVGGDGPKRVRLEE-----MREKHSLQDRVEMLGA-VPHAQVRSVLISGHIFLNSSLTE--AFCIAILEAASCG   73 (222)
Q Consensus         2 ~p~~~lvi~G~g~~~~~l~~-----~~~~~~l~~~V~~~g~-v~~~~~~~ll~~adv~v~~s~~E--~~g~~ilEAma~G   73 (222)
                      +|+++|+++|+++.......     +++++++.++|.|+|. ++.+++..+|+.+|++++||..|  ++|++++|||+||
T Consensus       214 ~~~~~l~i~G~~~~~~~~~~~~~~~~i~~~~~~~~v~~~~~~~~~~~~~~~~~~ad~~v~ps~~e~~~~~~~~~Ea~a~G  293 (366)
T cd03822         214 HPDVRLLVAGETHPDLERYRGEAYALAERLGLADRVIFINRYLPDEELPELFSAADVVVLPYRSADQTQSGVLAYAIGFG  293 (366)
T ss_pred             CCCeEEEEeccCccchhhhhhhhHhHHHhcCCCCcEEEecCcCCHHHHHHHHhhcCEEEecccccccccchHHHHHHHcC
Confidence            57999999998865543332     3788899999999987 99999999999999999999999  9999999999999


Q ss_pred             CcEEEeCCCCccccccCCceEE-eC-CCHHHHHHHHHHHHhcCC--CCCHHHHHHHHHhcCCHHHHHHHHHHHHH
Q 027511           74 LLTVSTRVGGVPEVLPDDMVVL-AE-PDPGDMVLAIRKAISLLP--KIDPQVMHERMKKLYNWHDVAKRTEIVYD  144 (222)
Q Consensus        74 ~PvVa~~~gg~~e~i~~~~~g~-~~-~~~~~la~~i~~ll~~~~--~~~~~~~~~~~~~~fs~~~~~~~~~~~~~  144 (222)
                      +|||+++.|+ .+.+.++.+|+ .. .|+++++++|.++++++.  ..++.++++.+.+ |||+.+++++.++|+
T Consensus       294 ~PvI~~~~~~-~~~i~~~~~g~~~~~~d~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~-~s~~~~~~~~~~~~~  366 (366)
T cd03822         294 KPVISTPVGH-AEEVLDGGTGLLVPPGDPAALAEAIRRLLADPELAQALRARAREYARA-MSWERVAERYLRLLA  366 (366)
T ss_pred             CCEEecCCCC-hheeeeCCCcEEEcCCCHHHHHHHHHHHHcChHHHHHHHHHHHHHHhh-CCHHHHHHHHHHHhC
Confidence            9999999999 66665555544 33 379999999999999866  6677888888877 999999999999873

ORF704 in E. coli has been shown to be involved in the biosynthesis of O-specific mannose homopolysaccharides.

>PRK10125 putative glycosyl transferase; Provisional

Probab=99.87  E-value=9.1e-22  Score=172.78  Aligned_cols=131  Identities=15%  Similarity=0.104  Sum_probs=105.8

Q ss_pred             CceEEEEEcCCccHHHHHHHHHHcCCCCcEEEeCCC-ChhHHHHHHHhccEEEEcCCCccccHHHHHHHHhCCcEEEeCC
Q 027511            3 VKVRFIVGGDGPKRVRLEEMREKHSLQDRVEMLGAV-PHAQVRSVLISGHIFLNSSLTEAFCIAILEAASCGLLTVSTRV   81 (222)
Q Consensus         3 p~~~lvi~G~g~~~~~l~~~~~~~~l~~~V~~~g~v-~~~~~~~ll~~adv~v~~s~~E~~g~~ilEAma~G~PvVa~~~   81 (222)
                      ++++|+|+|+|+...           .++|.++|.. +.+++..+|+++|+||+||..|+||++++||||||+|||+|++
T Consensus       270 ~~~~L~ivG~g~~~~-----------~~~v~~~g~~~~~~~l~~~y~~aDvfV~pS~~Egfp~vilEAmA~G~PVVat~~  338 (405)
T PRK10125        270 DKIELHTFGKFSPFT-----------AGNVVNHGFETDKRKLMSALNQMDALVFSSRVDNYPLILCEALSIGVPVIATHS  338 (405)
T ss_pred             CCeEEEEEcCCCccc-----------ccceEEecCcCCHHHHHHHHHhCCEEEECCccccCcCHHHHHHHcCCCEEEeCC
Confidence            578899999875321           2468889987 5678999999999999999999999999999999999999999


Q ss_pred             CCccccccCCceEE-eCC-CHHHHHHHHHHHHhcCC-CCCHHHHHHHHHhcCCHHHHHHHHHHHHHH
Q 027511           82 GGVPEVLPDDMVVL-AEP-DPGDMVLAIRKAISLLP-KIDPQVMHERMKKLYNWHDVAKRTEIVYDR  145 (222)
Q Consensus        82 gg~~e~i~~~~~g~-~~~-~~~~la~~i~~ll~~~~-~~~~~~~~~~~~~~fs~~~~~~~~~~~~~~  145 (222)
                      ||++|++.+. +|+ +++ |+++|++.+...+.+.. .....++++++.+.||++.++++|.++|++
T Consensus       339 gG~~Eiv~~~-~G~lv~~~d~~~La~~~~~~~~~~~~~~~~~~~r~~~~~~fs~~~~~~~y~~lY~~  404 (405)
T PRK10125        339 DAAREVLQKS-GGKTVSEEEVLQLAQLSKPEIAQAVFGTTLAEFSQRSRAAYSGQQMLEEYVNFYQN  404 (405)
T ss_pred             CChHHhEeCC-cEEEECCCCHHHHHhccCHHHHHHhhhhHHHHHHHHHHHhCCHHHHHHHHHHHHHh
Confidence            9999999876 454 444 89999986543332211 112356888889999999999999999975

>cd03812 GT1_CapH_like This family is most closely related to the GT1 family of glycosyltransferases

Probab=99.87  E-value=1.1e-21  Score=167.63  Aligned_cols=112  Identities=23%  Similarity=0.264  Sum_probs=104.7

Q ss_pred             CCceEEEEEcCCccHHHHHHHHHHcCCCCcEEEeCCCChhHHHHHHHhccEEEEcCCCccccHHHHHHHHhCCcEEEeCC
Q 027511            2 RVKVRFIVGGDGPKRVRLEEMREKHSLQDRVEMLGAVPHAQVRSVLISGHIFLNSSLTEAFCIAILEAASCGLLTVSTRV   81 (222)
Q Consensus         2 ~p~~~lvi~G~g~~~~~l~~~~~~~~l~~~V~~~g~v~~~~~~~ll~~adv~v~~s~~E~~g~~ilEAma~G~PvVa~~~   81 (222)
                      +|+++++|+|+|+..+.+++.++++++.++|.|+|.  .+++..+|+.||++|+||..|+||++++||||+|+|||+++.
T Consensus       221 ~~~~~l~ivG~g~~~~~~~~~~~~~~~~~~v~~~g~--~~~~~~~~~~adi~v~ps~~E~~~~~~lEAma~G~PvI~s~~  298 (358)
T cd03812         221 NPNAKLLLVGDGELEEEIKKKVKELGLEDKVIFLGV--RNDVPELLQAMDVFLFPSLYEGLPLVLIEAQASGLPCILSDT  298 (358)
T ss_pred             CCCeEEEEEeCCchHHHHHHHHHhcCCCCcEEEecc--cCCHHHHHHhcCEEEecccccCCCHHHHHHHHhCCCEEEEcC
Confidence            589999999999999999999999999999999999  688999999999999999999999999999999999999999


Q ss_pred             CCccccccCCceEEeCC-CHHHHHHHHHHHHhcCC
Q 027511           82 GGVPEVLPDDMVVLAEP-DPGDMVLAIRKAISLLP  115 (222)
Q Consensus        82 gg~~e~i~~~~~g~~~~-~~~~la~~i~~ll~~~~  115 (222)
                      ||..|++.++..++..+ ++++++++|.+++++++
T Consensus       299 ~~~~~~i~~~~~~~~~~~~~~~~a~~i~~l~~~~~  333 (358)
T cd03812         299 ITKEVDLTDLVKFLSLDESPEIWAEEILKLKSEDR  333 (358)
T ss_pred             CchhhhhccCccEEeCCCCHHHHHHHHHHHHhCcc
Confidence            99999999976666655 57999999999999988

capH in Staphylococcus aureus has been shown to be required for the biosynthesis of the type 1 capsular polysaccharide (CP1).

>PLN02501 digalactosyldiacylglycerol synthase

Probab=99.87  E-value=2.8e-21  Score=174.75  Aligned_cols=133  Identities=17%  Similarity=0.232  Sum_probs=114.2

Q ss_pred             CCceEEEEEcCCccHHHHHHHHHHcCCCCcEEEeCCCChhHHHHHHHhccEEEEcCCCccccHHHHHHHHhCCcEEEeCC
Q 027511            2 RVKVRFIVGGDGPKRVRLEEMREKHSLQDRVEMLGAVPHAQVRSVLISGHIFLNSSLTEAFCIAILEAASCGLLTVSTRV   81 (222)
Q Consensus         2 ~p~~~lvi~G~g~~~~~l~~~~~~~~l~~~V~~~g~v~~~~~~~ll~~adv~v~~s~~E~~g~~ilEAma~G~PvVa~~~   81 (222)
                      .|+++|+|+|+|+.+++++++++++++  +|.|+|..  ++...+|+.+|+||+||.+|+||++++||||||+|||+++.
T Consensus       575 ~pnvrLvIVGDGP~reeLe~la~eLgL--~V~FLG~~--dd~~~lyasaDVFVlPS~sEgFGlVlLEAMA~GlPVVATd~  650 (794)
T PLN02501        575 LDGFNLDVFGNGEDAHEVQRAAKRLDL--NLNFLKGR--DHADDSLHGYKVFINPSISDVLCTATAEALAMGKFVVCADH  650 (794)
T ss_pred             CCCeEEEEEcCCccHHHHHHHHHHcCC--EEEecCCC--CCHHHHHHhCCEEEECCCcccchHHHHHHHHcCCCEEEecC
Confidence            578999999999999999999999887  48999985  55678999999999999999999999999999999999999


Q ss_pred             CCccccccCCceEEeCCCHHHHHHHHHHHHhcCCCCCHHHHHHHHHhcCCHHHHHHHHHHHH
Q 027511           82 GGVPEVLPDDMVVLAEPDPGDMVLAIRKAISLLPKIDPQVMHERMKKLYNWHDVAKRTEIVY  143 (222)
Q Consensus        82 gg~~e~i~~~~~g~~~~~~~~la~~i~~ll~~~~~~~~~~~~~~~~~~fs~~~~~~~~~~~~  143 (222)
                      +|. +++.++.+++...|+++++++|.++++++......    .....|||+.+++++.+.-
T Consensus       651 pG~-e~V~~g~nGll~~D~EafAeAI~~LLsd~~~rl~~----~a~~~~SWeAaadrLle~~  707 (794)
T PLN02501        651 PSN-EFFRSFPNCLTYKTSEDFVAKVKEALANEPQPLTP----EQRYNLSWEAATQRFMEYS  707 (794)
T ss_pred             CCC-ceEeecCCeEecCCHHHHHHHHHHHHhCchhhhHH----HHHhhCCHHHHHHHHHHhh
Confidence            985 44667788888889999999999999986521111    1244899999999998865

>cd03804 GT1_wbaZ_like This family is most closely related to the GT1 family of glycosyltransferases

Probab=99.87  E-value=3.3e-21  Score=165.36  Aligned_cols=127  Identities=23%  Similarity=0.329  Sum_probs=110.6

Q ss_pred             eEEEEEcCCccHHHHHHHHHHcCCCCcEEEeCCCChhHHHHHHHhccEEEEcCCCccccHHHHHHHHhCCcEEEeCCCCc
Q 027511            5 VRFIVGGDGPKRVRLEEMREKHSLQDRVEMLGAVPHAQVRSVLISGHIFLNSSLTEAFCIAILEAASCGLLTVSTRVGGV   84 (222)
Q Consensus         5 ~~lvi~G~g~~~~~l~~~~~~~~l~~~V~~~g~v~~~~~~~ll~~adv~v~~s~~E~~g~~ilEAma~G~PvVa~~~gg~   84 (222)
                      ++|+|+|+|+..+++++     +..++|.|+|+++++++..+|++||++++||. |+||++++|||+||+|||+++.||.
T Consensus       222 ~~l~ivG~g~~~~~l~~-----~~~~~V~~~g~~~~~~~~~~~~~ad~~v~ps~-e~~g~~~~Eama~G~Pvi~~~~~~~  295 (351)
T cd03804         222 KRLVVIGDGPELDRLRA-----KAGPNVTFLGRVSDEELRDLYARARAFLFPAE-EDFGIVPVEAMASGTPVIAYGKGGA  295 (351)
T ss_pred             CcEEEEECChhHHHHHh-----hcCCCEEEecCCCHHHHHHHHHhCCEEEECCc-CCCCchHHHHHHcCCCEEEeCCCCC
Confidence            78999999988777666     45689999999999999999999999999999 9999999999999999999999999


Q ss_pred             cccccCCceEEeC--CCHHHHHHHHHHHHhcCCCCCHHHHHHHHHhcCCHHHHHHHH
Q 027511           85 PEVLPDDMVVLAE--PDPGDMVLAIRKAISLLPKIDPQVMHERMKKLYNWHDVAKRT  139 (222)
Q Consensus        85 ~e~i~~~~~g~~~--~~~~~la~~i~~ll~~~~~~~~~~~~~~~~~~fs~~~~~~~~  139 (222)
                      .|++.++.+|+..  .|+++++++|.+++++++ ....+.++++ +.|+|+++.+++
T Consensus       296 ~e~i~~~~~G~~~~~~~~~~la~~i~~l~~~~~-~~~~~~~~~~-~~~~~~~~~~~~  350 (351)
T cd03804         296 LETVIDGVTGILFEEQTVESLAAAVERFEKNED-FDPQAIRAHA-ERFSESRFREKI  350 (351)
T ss_pred             cceeeCCCCEEEeCCCCHHHHHHHHHHHHhCcc-cCHHHHHHHH-HhcCHHHHHHHh
Confidence            9999998777543  388999999999999875 3455566555 569999998875

wbaZ in Salmonella enterica has been shown to possess the mannosyl transferase activity. The members of this family are found in certain bacteria and Archaea.

>cd03814 GT1_like_2 This family is most closely related to the GT1 family of glycosyltransferases

Probab=99.87  E-value=1.8e-21  Score=165.38  Aligned_cols=135  Identities=24%  Similarity=0.369  Sum_probs=119.4

Q ss_pred             CceEEEEEcCCccHHHHHHHHHHcCCCCcEEEeCCCChhHHHHHHHhccEEEEcCCCccccHHHHHHHHhCCcEEEeCCC
Q 027511            3 VKVRFIVGGDGPKRVRLEEMREKHSLQDRVEMLGAVPHAQVRSVLISGHIFLNSSLTEAFCIAILEAASCGLLTVSTRVG   82 (222)
Q Consensus         3 p~~~lvi~G~g~~~~~l~~~~~~~~l~~~V~~~g~v~~~~~~~ll~~adv~v~~s~~E~~g~~ilEAma~G~PvVa~~~g   82 (222)
                      |+++|+++|+|+....++      +..++|.|+|+++.+++..+|+.||++++||..|+||++++|||+||+|||+++.+
T Consensus       226 ~~~~l~i~G~~~~~~~~~------~~~~~v~~~g~~~~~~~~~~~~~~d~~l~~s~~e~~~~~~lEa~a~g~PvI~~~~~  299 (364)
T cd03814         226 PPVRLVIVGDGPARARLE------ARYPNVHFLGFLDGEELAAAYASADVFVFPSRTETFGLVVLEAMASGLPVVAPDAG  299 (364)
T ss_pred             CCceEEEEeCCchHHHHh------ccCCcEEEEeccCHHHHHHHHHhCCEEEECcccccCCcHHHHHHHcCCCEEEcCCC
Confidence            689999999998776665      45678999999999999999999999999999999999999999999999999999


Q ss_pred             CccccccCCceEEeCC--CHHHHHHHHHHHHhcCC--CCCHHHHHHHHHhcCCHHHHHHHHHHHHH
Q 027511           83 GVPEVLPDDMVVLAEP--DPGDMVLAIRKAISLLP--KIDPQVMHERMKKLYNWHDVAKRTEIVYD  144 (222)
Q Consensus        83 g~~e~i~~~~~g~~~~--~~~~la~~i~~ll~~~~--~~~~~~~~~~~~~~fs~~~~~~~~~~~~~  144 (222)
                      +..|++.++.+|+..+  |.++++++|.+++.+++  ..+..++++.+ +.|+|+.+.+++.++|+
T Consensus       300 ~~~~~i~~~~~g~~~~~~~~~~l~~~i~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~  364 (364)
T cd03814         300 GPADIVTDGENGLLVEPGDAEAFAAALAALLADPELRRRMAARARAEA-ERRSWEAFLDNLLEAYR  364 (364)
T ss_pred             CchhhhcCCcceEEcCCCCHHHHHHHHHHHHcCHHHHHHHHHHHHHHH-hhcCHHHHHHHHHHhhC
Confidence            9999999977775433  77889999999999877  56667777766 77999999999999873

Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog

>TIGR03087 stp1 sugar transferase, PEP-CTERM/EpsH1 system associated

Probab=99.87  E-value=2e-21  Score=169.98  Aligned_cols=136  Identities=18%  Similarity=0.219  Sum_probs=112.1

Q ss_pred             CCceEEEEEcCCccHHHHHHHHHHcCCCCcEEEeCCCChhHHHHHHHhccEEEEcCC-CccccHHHHHHHHhCCcEEEeC
Q 027511            2 RVKVRFIVGGDGPKRVRLEEMREKHSLQDRVEMLGAVPHAQVRSVLISGHIFLNSSL-TEAFCIAILEAASCGLLTVSTR   80 (222)
Q Consensus         2 ~p~~~lvi~G~g~~~~~l~~~~~~~~l~~~V~~~g~v~~~~~~~ll~~adv~v~~s~-~E~~g~~ilEAma~G~PvVa~~   80 (222)
                      +|+++|+|+|+|+.. ++    ++++..++|.|+|+++  ++..+|++||++|+||. .|++|++++|||+||+|||+|+
T Consensus       257 ~p~~~l~ivG~g~~~-~~----~~l~~~~~V~~~G~v~--~~~~~~~~adv~v~Ps~~~eG~~~~~lEAma~G~PVV~t~  329 (397)
T TIGR03087       257 RPAAEFYIVGAKPSP-AV----RALAALPGVTVTGSVA--DVRPYLAHAAVAVAPLRIARGIQNKVLEAMAMAKPVVASP  329 (397)
T ss_pred             CCCcEEEEECCCChH-HH----HHhccCCCeEEeeecC--CHHHHHHhCCEEEecccccCCcccHHHHHHHcCCCEEecC
Confidence            589999999999753 33    3344457899999985  68999999999999997 5999999999999999999999


Q ss_pred             CCCccccccCCceEEeCCCHHHHHHHHHHHHhcCC--CCCHHHHHHHHHhcCCHHHHHHHHHHHHH
Q 027511           81 VGGVPEVLPDDMVVLAEPDPGDMVLAIRKAISLLP--KIDPQVMHERMKKLYNWHDVAKRTEIVYD  144 (222)
Q Consensus        81 ~gg~~e~i~~~~~g~~~~~~~~la~~i~~ll~~~~--~~~~~~~~~~~~~~fs~~~~~~~~~~~~~  144 (222)
                      .++.......+.+.++..|+++++++|.++++++.  ..++.++++.+.++|||+.++++++++|+
T Consensus       330 ~~~~~i~~~~~~g~lv~~~~~~la~ai~~ll~~~~~~~~~~~~ar~~v~~~fsw~~~~~~~~~~l~  395 (397)
T TIGR03087       330 EAAEGIDALPGAELLVAADPADFAAAILALLANPAEREELGQAARRRVLQHYHWPRNLARLDALLE  395 (397)
T ss_pred             cccccccccCCcceEeCCCHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHhc
Confidence            76432222233334455799999999999999876  67889999999999999999999999874

Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate.

>TIGR02095 glgA glycogen/starch synthases, ADP-glucose type

Probab=99.87  E-value=1.8e-21  Score=174.11  Aligned_cols=139  Identities=20%  Similarity=0.289  Sum_probs=115.5

Q ss_pred             ceEEEEEcCCc--cHHHHHHHHHHcCCCCcEEEeCCCChhHHHHHHHhccEEEEcCCCccccHHHHHHHHhCCcEEEeCC
Q 027511            4 KVRFIVGGDGP--KRVRLEEMREKHSLQDRVEMLGAVPHAQVRSVLISGHIFLNSSLTEAFCIAILEAASCGLLTVSTRV   81 (222)
Q Consensus         4 ~~~lvi~G~g~--~~~~l~~~~~~~~l~~~V~~~g~v~~~~~~~ll~~adv~v~~s~~E~~g~~ilEAma~G~PvVa~~~   81 (222)
                      +++|+|+|+|+  ..+++++++++++  +++.+.+..+.+++..+|++||++++||..|+||++++|||+||+|||+++.
T Consensus       320 ~~~lvi~G~g~~~~~~~l~~~~~~~~--~~v~~~~~~~~~~~~~~~~~aDv~l~pS~~E~~gl~~lEAma~G~pvI~s~~  397 (473)
T TIGR02095       320 GGQLVVLGTGDPELEEALRELAERYP--GNVRVIIGYDEALAHLIYAGADFILMPSRFEPCGLTQLYAMRYGTVPIVRRT  397 (473)
T ss_pred             CcEEEEECCCCHHHHHHHHHHHHHCC--CcEEEEEcCCHHHHHHHHHhCCEEEeCCCcCCcHHHHHHHHHCCCCeEEccC
Confidence            58999999995  4567778877654  5788888888888999999999999999999999999999999999999999


Q ss_pred             CCccccccCC------ceEEeC--CCHHHHHHHHHHHHh----cCCCCCHHHHHHHHHhcCCHHHHHHHHHHHHHH
Q 027511           82 GGVPEVLPDD------MVVLAE--PDPGDMVLAIRKAIS----LLPKIDPQVMHERMKKLYNWHDVAKRTEIVYDR  145 (222)
Q Consensus        82 gg~~e~i~~~------~~g~~~--~~~~~la~~i~~ll~----~~~~~~~~~~~~~~~~~fs~~~~~~~~~~~~~~  145 (222)
                      ||+.|++.++      .+|+..  .|+++++++|.++++    ++. ...+.+.+...+.|||+.+++++.++|++
T Consensus       398 gg~~e~v~~~~~~~~~~~G~l~~~~d~~~la~~i~~~l~~~~~~~~-~~~~~~~~~~~~~fsw~~~a~~~~~~Y~~  472 (473)
T TIGR02095       398 GGLADTVVDGDPEAESGTGFLFEEYDPGALLAALSRALRLYRQDPS-LWEALQKNAMSQDFSWDKSAKQYVELYRS  472 (473)
T ss_pred             CCccceEecCCCCCCCCceEEeCCCCHHHHHHHHHHHHHHHhcCHH-HHHHHHHHHhccCCCcHHHHHHHHHHHHh
Confidence            9999999987      677543  389999999999988    333 11122222335789999999999999986

This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate.

>cd03817 GT1_UGDG_like This family is most closely related to the GT1 family of glycosyltransferases

Probab=99.86  E-value=5.2e-21  Score=162.52  Aligned_cols=140  Identities=26%  Similarity=0.417  Sum_probs=122.0

Q ss_pred             CCceEEEEEcCCccHHHHHHHHHHcCCCCcEEEeCCCChhHHHHHHHhccEEEEcCCCccccHHHHHHHHhCCcEEEeCC
Q 027511            2 RVKVRFIVGGDGPKRVRLEEMREKHSLQDRVEMLGAVPHAQVRSVLISGHIFLNSSLTEAFCIAILEAASCGLLTVSTRV   81 (222)
Q Consensus         2 ~p~~~lvi~G~g~~~~~l~~~~~~~~l~~~V~~~g~v~~~~~~~ll~~adv~v~~s~~E~~g~~ilEAma~G~PvVa~~~   81 (222)
                      .++++|+++|+|+..+.++++++++++.++|.++|+++++++..+|++||++++|+..|++|++++|||+||+|||+++.
T Consensus       231 ~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~ad~~l~~s~~e~~~~~~~Ea~~~g~PvI~~~~  310 (374)
T cd03817         231 EPDVKLVIVGDGPEREELEELARELGLADRVIFTGFVPREELPDYYKAADLFVFASTTETQGLVLLEAMAAGLPVVAVDA  310 (374)
T ss_pred             CCCeEEEEEeCCchHHHHHHHHHHcCCCCcEEEeccCChHHHHHHHHHcCEEEecccccCcChHHHHHHHcCCcEEEeCC
Confidence            47899999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCccccccCCceEEeCC-CHHHHHHHHHHHHhcCC--CCCHHHHHHHHHhcCCHHHHHHHHHHHHHH
Q 027511           82 GGVPEVLPDDMVVLAEP-DPGDMVLAIRKAISLLP--KIDPQVMHERMKKLYNWHDVAKRTEIVYDR  145 (222)
Q Consensus        82 gg~~e~i~~~~~g~~~~-~~~~la~~i~~ll~~~~--~~~~~~~~~~~~~~fs~~~~~~~~~~~~~~  145 (222)
                      |+..|++.++.+|+..+ +.++++++|.++++++.  +.++.++++.+.+.+    +.++++++|++
T Consensus       311 ~~~~~~i~~~~~g~~~~~~~~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~  373 (374)
T cd03817         311 PGLPDLVADGENGFLFPPGDEALAEALLRLLQDPELRRRLSKNAEESAEKFS----FAKKVEKLYEE  373 (374)
T ss_pred             CChhhheecCceeEEeCCCCHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHH----HHHHHHHHHhc
Confidence            99999999987775544 33399999999999877  466667776665544    66677777654

UDP-glucose-diacylglycerol glucosyltransferase (UGDG; also known as 1,2-diacylglycerol 3-glucosyltransferase) catalyzes the transfer of glucose from UDP-glucose to 1,2-diacylglycerol forming 3-D-glucosyl-1,2-diacylglycerol.

>cd03808 GT1_cap1E_like This family is most closely related to the GT1 family of glycosyltransferases

Probab=99.86  E-value=4.2e-21  Score=161.75  Aligned_cols=137  Identities=26%  Similarity=0.316  Sum_probs=121.7

Q ss_pred             CCceEEEEEcCCccHHHHHHH-HHHcCCCCcEEEeCCCChhHHHHHHHhccEEEEcCCCccccHHHHHHHHhCCcEEEeC
Q 027511            2 RVKVRFIVGGDGPKRVRLEEM-REKHSLQDRVEMLGAVPHAQVRSVLISGHIFLNSSLTEAFCIAILEAASCGLLTVSTR   80 (222)
Q Consensus         2 ~p~~~lvi~G~g~~~~~l~~~-~~~~~l~~~V~~~g~v~~~~~~~ll~~adv~v~~s~~E~~g~~ilEAma~G~PvVa~~   80 (222)
                      +|+++|+++|.++........ +.+.+..++|.|+|+  .+++..+|++||++++||..|++|++++|||+||+|||+++
T Consensus       217 ~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~~v~~~g~--~~~~~~~~~~adi~i~ps~~e~~~~~~~Ea~~~G~Pvi~s~  294 (359)
T cd03808         217 GPNVRLLLVGDGDEENPAAILEIEKLGLEGRVEFLGF--RDDVPELLAAADVFVLPSYREGLPRVLLEAMAMGRPVIATD  294 (359)
T ss_pred             CCCeEEEEEcCCCcchhhHHHHHHhcCCcceEEEeec--cccHHHHHHhccEEEecCcccCcchHHHHHHHcCCCEEEec
Confidence            589999999998877666554 677788889999999  68899999999999999999999999999999999999999


Q ss_pred             CCCccccccCCceEEeCC--CHHHHHHHHHHHHhcCC--CCCHHHHHHHHHhcCCHHHHHHHHH
Q 027511           81 VGGVPEVLPDDMVVLAEP--DPGDMVLAIRKAISLLP--KIDPQVMHERMKKLYNWHDVAKRTE  140 (222)
Q Consensus        81 ~gg~~e~i~~~~~g~~~~--~~~~la~~i~~ll~~~~--~~~~~~~~~~~~~~fs~~~~~~~~~  140 (222)
                      .++..|++.++.+|+..+  |+++++++|.+++.+++  ..++.++++.+.++|+|+.+++++.
T Consensus       295 ~~~~~~~i~~~~~g~~~~~~~~~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~  358 (359)
T cd03808         295 VPGCREAVIDGVNGFLVPPGDAEALADAIERLIEDPELRARMGQAARKRAEEEFDEEIVVKKLL  358 (359)
T ss_pred             CCCchhhhhcCcceEEECCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhcCHHHHHHHhh
Confidence            999999999887775443  79999999999998877  6677888999899999999998875

cap1E in Streptococcus pneumoniae is required for the synthesis of type 1 capsular polysaccharides.

>cd03820 GT1_amsD_like This family is most closely related to the GT1 family of glycosyltransferases

Probab=99.86  E-value=5.9e-21  Score=160.18  Aligned_cols=136  Identities=24%  Similarity=0.316  Sum_probs=118.2

Q ss_pred             CCceEEEEEcCCccHHHHHHHHHHcCCCCcEEEeCCCChhHHHHHHHhccEEEEcCCCccccHHHHHHHHhCCcEEEeCC
Q 027511            2 RVKVRFIVGGDGPKRVRLEEMREKHSLQDRVEMLGAVPHAQVRSVLISGHIFLNSSLTEAFCIAILEAASCGLLTVSTRV   81 (222)
Q Consensus         2 ~p~~~lvi~G~g~~~~~l~~~~~~~~l~~~V~~~g~v~~~~~~~ll~~adv~v~~s~~E~~g~~ilEAma~G~PvVa~~~   81 (222)
                      .|+++|+|+|+|+....++++++++++.++|.+.|.  .+++..+|++||++++||..|++|++++|||+||+|||+++.
T Consensus       207 ~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~v~~~g~--~~~~~~~~~~ad~~i~ps~~e~~~~~~~Ea~a~G~Pvi~~~~  284 (348)
T cd03820         207 HPDWKLRIVGDGPEREALEALIKELGLEDRVILLGF--TKNIEEYYAKASIFVLTSRFEGFPMVLLEAMAFGLPVISFDC  284 (348)
T ss_pred             CCCeEEEEEeCCCCHHHHHHHHHHcCCCCeEEEcCC--cchHHHHHHhCCEEEeCccccccCHHHHHHHHcCCCEEEecC
Confidence            689999999999999999999999999999999998  689999999999999999999999999999999999999997


Q ss_pred             C-CccccccCCceEEeC--CCHHHHHHHHHHHHhcCC--CCCHHHHHHHHHhcCCHHHHHHHHH
Q 027511           82 G-GVPEVLPDDMVVLAE--PDPGDMVLAIRKAISLLP--KIDPQVMHERMKKLYNWHDVAKRTE  140 (222)
Q Consensus        82 g-g~~e~i~~~~~g~~~--~~~~~la~~i~~ll~~~~--~~~~~~~~~~~~~~fs~~~~~~~~~  140 (222)
                      + +..+++.++.+|+..  .|+++++++|.+++++++  ..++.++ ....+.|+|+.+++++.
T Consensus       285 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~ll~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~  347 (348)
T cd03820         285 PTGPSEIIEDGVNGLLVPNGDVEALAEALLRLMEDEELRKRMGANA-RESAERFSIENIIKQWE  347 (348)
T ss_pred             CCchHhhhccCcceEEeCCCCHHHHHHHHHHHHcCHHHHHHHHHHH-HHHHHHhCHHHHHHHhc
Confidence            5 566677776466433  378999999999999877  4556666 45567899999998875

AmSD in Erwinia amylovora has been shown to be involved in the biosynthesis of amylovoran, the acidic exopolysaccharide acting as a virulence factor. This enzyme may be responsible for the formation of galactose alpha-1,6 linkages in amylovoran.

>PF00534 Glycos_transf_1: Glycosyl transferases group 1; InterPro: IPR001296 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases

Probab=99.85  E-value=3.3e-21  Score=149.33  Aligned_cols=123  Identities=25%  Similarity=0.431  Sum_probs=107.3

Q ss_pred             CCceEEEEEcCCccHHHHHHHHHHcCCCCcEEEeCCCChhHHHHHHHhccEEEEcCCCccccHHHHHHHHhCCcEEEeCC
Q 027511            2 RVKVRFIVGGDGPKRVRLEEMREKHSLQDRVEMLGAVPHAQVRSVLISGHIFLNSSLTEAFCIAILEAASCGLLTVSTRV   81 (222)
Q Consensus         2 ~p~~~lvi~G~g~~~~~l~~~~~~~~l~~~V~~~g~v~~~~~~~ll~~adv~v~~s~~E~~g~~ilEAma~G~PvVa~~~   81 (222)
                      .++++++|+|+++....+...++.+++.+++.|+|.++.+++..+|+.+|++|+||..|+||.+++|||+||+|||+++.
T Consensus        45 ~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~~~di~v~~s~~e~~~~~~~Ea~~~g~pvI~~~~  124 (172)
T PF00534_consen   45 NPNYKLVIVGDGEYKKELKNLIEKLNLKENIIFLGYVPDDELDELYKSSDIFVSPSRNEGFGLSLLEAMACGCPVIASDI  124 (172)
T ss_dssp             HTTEEEEEESHCCHHHHHHHHHHHTTCGTTEEEEESHSHHHHHHHHHHTSEEEE-BSSBSS-HHHHHHHHTT-EEEEESS
T ss_pred             CCCeEEEEEcccccccccccccccccccccccccccccccccccccccceeccccccccccccccccccccccceeeccc
Confidence            47899999999889999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCccccccCCceEEe--CCCHHHHHHHHHHHHhcCC--CCCHHHHHH
Q 027511           82 GGVPEVLPDDMVVLA--EPDPGDMVLAIRKAISLLP--KIDPQVMHE  124 (222)
Q Consensus        82 gg~~e~i~~~~~g~~--~~~~~~la~~i~~ll~~~~--~~~~~~~~~  124 (222)
                      |+..|++.++.+|+.  ..|+++++++|.+++++++  ..++.++++
T Consensus       125 ~~~~e~~~~~~~g~~~~~~~~~~l~~~i~~~l~~~~~~~~l~~~~~~  171 (172)
T PF00534_consen  125 GGNNEIINDGVNGFLFDPNDIEELADAIEKLLNDPELRQKLGKNARE  171 (172)
T ss_dssp             THHHHHSGTTTSEEEESTTSHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             cCCceeeccccceEEeCCCCHHHHHHHHHHHHCCHHHHHHHHHHhcC
Confidence            999999999986644  3388999999999999865  344444443

These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Proteins containign this domain transfer UDP, ADP, GDP or CMP linked sugars to a variety of substrates, including glycogen, fructose-6-phosphate and lipopolysaccharides. The bacterial enzymes are involved in various biosynthetic processes that include exopolysaccharide biosynthesis, lipopolysaccharide core biosynthesis and the biosynthesis of the slime polysaccaride colanic acid. Mutations in this domain of the human N-acetylglucosaminyl-phosphatidylinositol biosynthetic protein are the cause of paroxysmal nocturnal hemoglobinuria (PNH), an acquired hemolytic blood disorder characterised by venous thrombosis, erythrocyte hemolysis, infections and defective hematopoiesis.; GO: 0009058 biosynthetic process; PDB: 2L7C_A 2IV3_B 2IUY_B 2XA9_A 2XA1_B 2X6R_A 2XMP_B 2XA2_B 2X6Q_A 3QHP_B ....

>PLN02275 transferase, transferring glycosyl groups

Probab=99.85  E-value=9.7e-21  Score=164.47  Aligned_cols=109  Identities=16%  Similarity=0.230  Sum_probs=99.3

Q ss_pred             CCceEEEEEcCCccHHHHHHHHHHcCCCCcEEEeC-CCChhHHHHHHHhccEEEEcCC---CccccHHHHHHHHhCCcEE
Q 027511            2 RVKVRFIVGGDGPKRVRLEEMREKHSLQDRVEMLG-AVPHAQVRSVLISGHIFLNSSL---TEAFCIAILEAASCGLLTV   77 (222)
Q Consensus         2 ~p~~~lvi~G~g~~~~~l~~~~~~~~l~~~V~~~g-~v~~~~~~~ll~~adv~v~~s~---~E~~g~~ilEAma~G~PvV   77 (222)
                      +|+++|+|+|+|+.+++++++++++++.+ |.|.+ +++++++..+|+.||++|.|+.   .|++|++++||||||+|||
T Consensus       259 ~~~i~l~ivG~G~~~~~l~~~~~~~~l~~-v~~~~~~~~~~~~~~~l~~aDv~v~~~~s~~~e~~p~~llEAmA~G~PVV  337 (371)
T PLN02275        259 YPRLLFIITGKGPQKAMYEEKISRLNLRH-VAFRTMWLEAEDYPLLLGSADLGVSLHTSSSGLDLPMKVVDMFGCGLPVC  337 (371)
T ss_pred             CCCeEEEEEeCCCCHHHHHHHHHHcCCCc-eEEEcCCCCHHHHHHHHHhCCEEEEeccccccccccHHHHHHHHCCCCEE
Confidence            48999999999999999999999999976 77765 6999999999999999997632   4889999999999999999


Q ss_pred             EeCCCCccccccCCceEEeCCCHHHHHHHHHHHH
Q 027511           78 STRVGGVPEVLPDDMVVLAEPDPGDMVLAIRKAI  111 (222)
Q Consensus        78 a~~~gg~~e~i~~~~~g~~~~~~~~la~~i~~ll  111 (222)
                      +++.||.+|++.++.+|+..+++++++++|.+++
T Consensus       338 a~~~gg~~eiv~~g~~G~lv~~~~~la~~i~~l~  371 (371)
T PLN02275        338 AVSYSCIGELVKDGKNGLLFSSSSELADQLLELL  371 (371)
T ss_pred             EecCCChHHHccCCCCeEEECCHHHHHHHHHHhC
Confidence            9999999999999999988889999999998764

>PHA01633 putative glycosyl transferase group 1

Probab=99.85  E-value=3e-20  Score=158.38  Aligned_cols=128  Identities=17%  Similarity=0.142  Sum_probs=103.0

Q ss_pred             ceEEEEEcCCccHHHHHHHHHHcCCCCcEEEe---CCCChhHHHHHHHhccEEEEcCCCccccHHHHHHHHhCCcEEEeC
Q 027511            4 KVRFIVGGDGPKRVRLEEMREKHSLQDRVEML---GAVPHAQVRSVLISGHIFLNSSLTEAFCIAILEAASCGLLTVSTR   80 (222)
Q Consensus         4 ~~~lvi~G~g~~~~~l~~~~~~~~l~~~V~~~---g~v~~~~~~~ll~~adv~v~~s~~E~~g~~ilEAma~G~PvVa~~   80 (222)
                      +++++++|++        ..++++++++|.|+   |.++.+++..+|++||++|+||..|+||++++|||+||+|||+++
T Consensus       183 ~i~l~ivG~~--------~~~~l~l~~~V~f~g~~G~~~~~dl~~~y~~aDifV~PS~~EgfGlvlLEAMA~G~PVVas~  254 (335)
T PHA01633        183 KIHFFVISHK--------QFTQLEVPANVHFVAEFGHNSREYIFAFYGAMDFTIVPSGTEGFGMPVLESMAMGTPVIHQL  254 (335)
T ss_pred             cEEEEEEcHH--------HHHHcCCCCcEEEEecCCCCCHHHHHHHHHhCCEEEECCccccCCHHHHHHHHcCCCEEEcc
Confidence            4678888742        23556788899998   566789999999999999999999999999999999999999999


Q ss_pred             CCCccccccC------------------CceEEe--CCCHHHHHHHHHHHHhcCC-CCCHHHHHHHHHhcCCHHHHHHHH
Q 027511           81 VGGVPEVLPD------------------DMVVLA--EPDPGDMVLAIRKAISLLP-KIDPQVMHERMKKLYNWHDVAKRT  139 (222)
Q Consensus        81 ~gg~~e~i~~------------------~~~g~~--~~~~~~la~~i~~ll~~~~-~~~~~~~~~~~~~~fs~~~~~~~~  139 (222)
                      .||++|++.+                  ++.|+.  ..|+++++++|.++++..+ ..++.+++ ...+.|+|+.+.+++
T Consensus       255 ~~~l~Ei~g~~~~~Li~~~~v~~~~~~~~g~g~~~~~~d~~~la~ai~~~~~~~~~~~~~~~~~-~~a~~f~~~~~~~~~  333 (335)
T PHA01633        255 MPPLDEFTSWQWNLLIKSSKVEEYYDKEHGQKWKIHKFQIEDMANAIILAFELQDREERSMKLK-ELAKKYDIRNLYTRF  333 (335)
T ss_pred             CCCceeecCCccceeeCCCCHHHhcCcccCceeeecCCCHHHHHHHHHHHHhccChhhhhHHHH-HHHHhcCHHHHHHHh
Confidence            9999997552                  123444  3499999999999987755 33344454 556779999999988


Q ss_pred             H
Q 027511          140 E  140 (222)
Q Consensus       140 ~  140 (222)
                      +
T Consensus       334 ~  334 (335)
T PHA01633        334 L  334 (335)
T ss_pred             h
Confidence            6

>cd03791 GT1_Glycogen_synthase_DULL1_like This family is most closely related to the GT1 family of glycosyltransferases

Probab=99.85  E-value=1.4e-20  Score=168.17  Aligned_cols=139  Identities=19%  Similarity=0.279  Sum_probs=115.0

Q ss_pred             ceEEEEEcCCcc--HHHHHHHHHHcCCCCcEEEeCCCChhHHHHHHHhccEEEEcCCCccccHHHHHHHHhCCcEEEeCC
Q 027511            4 KVRFIVGGDGPK--RVRLEEMREKHSLQDRVEMLGAVPHAQVRSVLISGHIFLNSSLTEAFCIAILEAASCGLLTVSTRV   81 (222)
Q Consensus         4 ~~~lvi~G~g~~--~~~l~~~~~~~~l~~~V~~~g~v~~~~~~~ll~~adv~v~~s~~E~~g~~ilEAma~G~PvVa~~~   81 (222)
                      +++|+|+|+|+.  .+.++++++++  .+++.+++..+.+++..+++.||++++||..|+||++++|||+||+|||+++.
T Consensus       325 ~~~lvi~G~g~~~~~~~~~~~~~~~--~~~v~~~~~~~~~~~~~~~~~aDv~l~pS~~E~~gl~~lEAma~G~pvI~~~~  402 (476)
T cd03791         325 GGQLVILGSGDPEYEEALRELAARY--PGRVAVLIGYDEALAHLIYAGADFFLMPSRFEPCGLTQMYAMRYGTVPIVRAT  402 (476)
T ss_pred             CcEEEEEecCCHHHHHHHHHHHHhC--CCcEEEEEeCCHHHHHHHHHhCCEEECCCCCCCCcHHHHHHhhCCCCCEECcC
Confidence            489999998864  35666666665  56788877777888899999999999999999999999999999999999999


Q ss_pred             CCccccccCCc------eEEeC--CCHHHHHHHHHHHHhcCC--CCCHHHHHHHHHhcCCHHHHHHHHHHHHH
Q 027511           82 GGVPEVLPDDM------VVLAE--PDPGDMVLAIRKAISLLP--KIDPQVMHERMKKLYNWHDVAKRTEIVYD  144 (222)
Q Consensus        82 gg~~e~i~~~~------~g~~~--~~~~~la~~i~~ll~~~~--~~~~~~~~~~~~~~fs~~~~~~~~~~~~~  144 (222)
                      ||+.|++.++.      +|+..  .|+++++++|.++++...  ......+++...+.|||+.+++++.++|+
T Consensus       403 gg~~e~v~~~~~~~~~~~G~~~~~~~~~~l~~~i~~~l~~~~~~~~~~~~~~~~~~~~fsw~~~a~~~~~~y~  475 (476)
T cd03791         403 GGLADTVIDYNEDTGEGTGFVFEGYNADALLAALRRALALYRDPEAWRKLQRNAMAQDFSWDRSAKEYLELYR  475 (476)
T ss_pred             CCccceEeCCcCCCCCCCeEEeCCCCHHHHHHHHHHHHHHHcCHHHHHHHHHHHhccCCChHHHHHHHHHHHh
Confidence            99999999976      66543  389999999999997643  33334445555678999999999999996

Glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms.

>cd03819 GT1_WavL_like This family is most closely related to the GT1 family of glycosyltransferases

Probab=99.84  E-value=1.3e-20  Score=160.94  Aligned_cols=132  Identities=22%  Similarity=0.297  Sum_probs=113.7

Q ss_pred             CCceEEEEEcCCccHH----HHHHHHHHcCCCCcEEEeCCCChhHHHHHHHhccEEEEcC-CCccccHHHHHHHHhCCcE
Q 027511            2 RVKVRFIVGGDGPKRV----RLEEMREKHSLQDRVEMLGAVPHAQVRSVLISGHIFLNSS-LTEAFCIAILEAASCGLLT   76 (222)
Q Consensus         2 ~p~~~lvi~G~g~~~~----~l~~~~~~~~l~~~V~~~g~v~~~~~~~ll~~adv~v~~s-~~E~~g~~ilEAma~G~Pv   76 (222)
                      .++++++|+|.|+...    .+.+.++++++.++|.|+|+  .+++..+|++||++++|| ..|+||++++|||+||+||
T Consensus       214 ~~~~~l~ivG~~~~~~~~~~~~~~~~~~~~~~~~v~~~g~--~~~~~~~l~~ad~~i~ps~~~e~~~~~l~EA~a~G~Pv  291 (355)
T cd03819         214 DPDVHLLIVGDAQGRRFYYAELLELIKRLGLQDRVTFVGH--CSDMPAAYALADIVVSASTEPEAFGRTAVEAQAMGRPV  291 (355)
T ss_pred             CCCeEEEEEECCcccchHHHHHHHHHHHcCCcceEEEcCC--cccHHHHHHhCCEEEecCCCCCCCchHHHHHHhcCCCE
Confidence            4789999999886543    34556778888889999999  689999999999999999 7999999999999999999


Q ss_pred             EEeCCCCccccccCCceEEeC--CCHHHHHHHHHHHHh-cCC--CCCHHHHHHHHHhcCCHHHH
Q 027511           77 VSTRVGGVPEVLPDDMVVLAE--PDPGDMVLAIRKAIS-LLP--KIDPQVMHERMKKLYNWHDV  135 (222)
Q Consensus        77 Va~~~gg~~e~i~~~~~g~~~--~~~~~la~~i~~ll~-~~~--~~~~~~~~~~~~~~fs~~~~  135 (222)
                      |+++.|+..|++.++.+|+..  .|+++++++|..++. +++  ..++.++++.+.++|+|+.+
T Consensus       292 I~~~~~~~~e~i~~~~~g~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~a~~~~~~~f~~~~~  355 (355)
T cd03819         292 IASDHGGARETVRPGETGLLVPPGDAEALAQALDQILSLLPEGRAKMFAKARMCVETLFSYDRM  355 (355)
T ss_pred             EEcCCCCcHHHHhCCCceEEeCCCCHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHhhhhccC
Confidence            999999999999998666543  489999999976665 444  67889999999999999864

WavL in Vibrio cholerae has been shown to be involved in the biosynthesis of the lipopolysaccharide core.

>KOG0853 consensus Glycosyltransferase [Cell wall/membrane/envelope biogenesis]

Probab=99.84  E-value=2.8e-20  Score=163.13  Aligned_cols=150  Identities=21%  Similarity=0.256  Sum_probs=129.3

Q ss_pred             CCceEEEEEcCC--c--------cHHHHHHHHHHcCC-CCcEEEeCCCChhHHHHHHHhccEEEEcCCCccccHHHHHHH
Q 027511            2 RVKVRFIVGGDG--P--------KRVRLEEMREKHSL-QDRVEMLGAVPHAQVRSVLISGHIFLNSSLTEAFCIAILEAA   70 (222)
Q Consensus         2 ~p~~~lvi~G~g--~--------~~~~l~~~~~~~~l-~~~V~~~g~v~~~~~~~ll~~adv~v~~s~~E~~g~~ilEAm   70 (222)
                      .++.+++++|+-  +        ..+++.++++++++ .+.|.|+...++.+...+++.+.+.++++..|+||++++|||
T Consensus       307 ~~~~hl~~~g~~G~d~~~sen~~~~~el~~lie~~~l~g~~v~~~~s~~~~~~yrl~adt~~v~~qPa~E~FGiv~IEAM  386 (495)
T KOG0853|consen  307 ISSEHLVVAGSRGYDERDSENVEYLKELLSLIEEYDLLGQFVWFLPSTTRVAKYRLAADTKGVLYQPANEHFGIVPIEAM  386 (495)
T ss_pred             CCceEEEEecCCCccccchhhHHHHHHHHHHHHHhCccCceEEEecCCchHHHHHHHHhcceEEecCCCCCccceeHHHH
Confidence            367788899821  1        12677788999988 477888899988999999999999888777799999999999


Q ss_pred             HhCCcEEEeCCCCccccccCCceEEe-CCCHH---HHHHHHHHHHhcCC--CCCHHHHHHHHHhcCCHHHHHHHHHHHHH
Q 027511           71 SCGLLTVSTRVGGVPEVLPDDMVVLA-EPDPG---DMVLAIRKAISLLP--KIDPQVMHERMKKLYNWHDVAKRTEIVYD  144 (222)
Q Consensus        71 a~G~PvVa~~~gg~~e~i~~~~~g~~-~~~~~---~la~~i~~ll~~~~--~~~~~~~~~~~~~~fs~~~~~~~~~~~~~  144 (222)
                      +||+|||||+.||+.|++.++.+||. +|+.+   .+++++.++..++.  .+++.++++++.++|+|+.+.+++.++..
T Consensus       387 a~glPvvAt~~GGP~EiV~~~~tG~l~dp~~e~~~~~a~~~~kl~~~p~l~~~~~~~G~~rV~e~fs~~~~~~ri~~~~~  466 (495)
T KOG0853|consen  387 ACGLPVVATNNGGPAEIVVHGVTGLLIDPGQEAVAELADALLKLRRDPELWARMGKNGLKRVKEMFSWQHYSERIASVLG  466 (495)
T ss_pred             hcCCCEEEecCCCceEEEEcCCcceeeCCchHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhH
Confidence            99999999999999999999999864 45665   69999999999998  88999999999999999999999999998


Q ss_pred             HHhcCCC
Q 027511          145 RALECPN  151 (222)
Q Consensus       145 ~~~~~~~  151 (222)
                      .....+.
T Consensus       467 ~~~~~~~  473 (495)
T KOG0853|consen  467 KYLQWEK  473 (495)
T ss_pred             hcCCccc
Confidence            7765443

>cd03809 GT1_mtfB_like This family is most closely related to the GT1 family of glycosyltransferases

Probab=99.83  E-value=1.6e-20  Score=159.80  Aligned_cols=137  Identities=23%  Similarity=0.357  Sum_probs=116.5

Q ss_pred             CceEEEEEcCCccH-HHHHHHHHHcCCCCcEEEeCCCChhHHHHHHHhccEEEEcCCCccccHHHHHHHHhCCcEEEeCC
Q 027511            3 VKVRFIVGGDGPKR-VRLEEMREKHSLQDRVEMLGAVPHAQVRSVLISGHIFLNSSLTEAFCIAILEAASCGLLTVSTRV   81 (222)
Q Consensus         3 p~~~lvi~G~g~~~-~~l~~~~~~~~l~~~V~~~g~v~~~~~~~ll~~adv~v~~s~~E~~g~~ilEAma~G~PvVa~~~   81 (222)
                      ++++|+++|.++.. ....+..++.+..++|.++|+++.+++..+++++|++++||..|++|++++|||++|+|||+++.
T Consensus       225 ~~~~l~i~G~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~~d~~l~ps~~e~~~~~~~Ea~a~G~pvI~~~~  304 (365)
T cd03809         225 PDPKLVIVGKRGWLNEELLARLRELGLGDRVRFLGYVSDEELAALYRGARAFVFPSLYEGFGLPVLEAMACGTPVIASNI  304 (365)
T ss_pred             CCCCEEEecCCccccHHHHHHHHHcCCCCeEEECCCCChhHHHHHHhhhhhhcccchhccCCCCHHHHhcCCCcEEecCC
Confidence            46899999976443 33444446788889999999999999999999999999999999999999999999999999999


Q ss_pred             CCccccccCCceEEeCCCHHHHHHHHHHHHhcCC--CCCHHHHHHHHHhcCCHHHHHHHHH
Q 027511           82 GGVPEVLPDDMVVLAEPDPGDMVLAIRKAISLLP--KIDPQVMHERMKKLYNWHDVAKRTE  140 (222)
Q Consensus        82 gg~~e~i~~~~~g~~~~~~~~la~~i~~ll~~~~--~~~~~~~~~~~~~~fs~~~~~~~~~  140 (222)
                      |+..|++.++...+...|+++++++|.+++++++  ..++.+++ ...+.|+|+.+++++.
T Consensus       305 ~~~~e~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~~~~~-~~~~~~sw~~~~~~~~  364 (365)
T cd03809         305 SSLPEVAGDAALYFDPLDPEALAAAIERLLEDPALREELRERGL-ARAKRFSWEKTARRTL  364 (365)
T ss_pred             CCccceecCceeeeCCCCHHHHHHHHHHHhcCHHHHHHHHHHHH-HHHHhCCHHHHHHHHh
Confidence            9999999776655666689999999999998877  45556665 5567899999999875

mtfB (mannosyltransferase B) in E. coli has been shown to direct the growth of the O9-specific polysaccharide chain. It transfers two mannoses into the position 3 of the previously synthesized polysaccharide.

>cd03794 GT1_wbuB_like This family is most closely related to the GT1 family of glycosyltransferases

Probab=99.83  E-value=5.4e-20  Score=156.65  Aligned_cols=136  Identities=21%  Similarity=0.299  Sum_probs=121.3

Q ss_pred             CceEEEEEcCCccHHHHHHHHHHcCCCCcEEEeCCCChhHHHHHHHhccEEEEcCCCccc-----cHHHHHHHHhCCcEE
Q 027511            3 VKVRFIVGGDGPKRVRLEEMREKHSLQDRVEMLGAVPHAQVRSVLISGHIFLNSSLTEAF-----CIAILEAASCGLLTV   77 (222)
Q Consensus         3 p~~~lvi~G~g~~~~~l~~~~~~~~l~~~V~~~g~v~~~~~~~ll~~adv~v~~s~~E~~-----g~~ilEAma~G~PvV   77 (222)
                      |+++|+++|+|+....+.+.+...++ ++|.++|+++++++..+|+.||++++|+..|++     +++++|||+||+|||
T Consensus       249 ~~~~l~i~G~~~~~~~~~~~~~~~~~-~~v~~~g~~~~~~~~~~~~~~di~i~~~~~~~~~~~~~p~~~~Ea~~~G~pvi  327 (394)
T cd03794         249 PDIRFLIVGDGPEKEELKELAKALGL-DNVTFLGRVPKEELPELLAAADVGLVPLKPGPAFEGVSPSKLFEYMAAGKPVL  327 (394)
T ss_pred             CCeEEEEeCCcccHHHHHHHHHHcCC-CcEEEeCCCChHHHHHHHHhhCeeEEeccCcccccccCchHHHHHHHCCCcEE
Confidence            58999999999999888888777666 579999999999999999999999999998875     888999999999999


Q ss_pred             EeCCCCccccccCCceEEeC--CCHHHHHHHHHHHHhcCC--CCCHHHHHHHHHhcCCHHHHHHHH
Q 027511           78 STRVGGVPEVLPDDMVVLAE--PDPGDMVLAIRKAISLLP--KIDPQVMHERMKKLYNWHDVAKRT  139 (222)
Q Consensus        78 a~~~gg~~e~i~~~~~g~~~--~~~~~la~~i~~ll~~~~--~~~~~~~~~~~~~~fs~~~~~~~~  139 (222)
                      +++.++..+++.++.+|+..  .|+++++++|.++++++.  ..++.++++.+.+.|+|+.+++++
T Consensus       328 ~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~  393 (394)
T cd03794         328 ASVDGESAELVEEAGAGLVVPPGDPEALAAAILELLDDPEERAEMGENGRRYVEEKFSREKLAERL  393 (394)
T ss_pred             EecCCCchhhhccCCcceEeCCCCHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHhhcHHHHHHhc
Confidence            99999999999987666443  389999999999998876  677888999999899999999876

wbuB in E. coli is involved in the biosynthesis of the O26 O-antigen. It has been proposed to function as an N-acetyl-L-fucosamine (L-FucNAc) transferase.

>cd03823 GT1_ExpE7_like This family is most closely related to the GT1 family of glycosyltransferases

Probab=99.83  E-value=4.7e-20  Score=156.21  Aligned_cols=135  Identities=21%  Similarity=0.288  Sum_probs=112.4

Q ss_pred             CceEEEEEcCCccHHHHHHHHHHcCCCCcEEEeCCCChhHHHHHHHhccEEEEcCC-CccccHHHHHHHHhCCcEEEeCC
Q 027511            3 VKVRFIVGGDGPKRVRLEEMREKHSLQDRVEMLGAVPHAQVRSVLISGHIFLNSSL-TEAFCIAILEAASCGLLTVSTRV   81 (222)
Q Consensus         3 p~~~lvi~G~g~~~~~l~~~~~~~~l~~~V~~~g~v~~~~~~~ll~~adv~v~~s~-~E~~g~~ilEAma~G~PvVa~~~   81 (222)
                      ++++|+++|.++.........   +..++|.++|+++.+++..++++||++++||. .|++|++++|||+||+|||+++.
T Consensus       219 ~~~~l~i~G~~~~~~~~~~~~---~~~~~v~~~g~~~~~~~~~~~~~ad~~i~ps~~~e~~~~~~~Ea~a~G~Pvi~~~~  295 (359)
T cd03823         219 GDIELVIVGNGLELEEESYEL---EGDPRVEFLGAYPQEEIDDFYAEIDVLVVPSIWPENFPLVIREALAAGVPVIASDI  295 (359)
T ss_pred             cCcEEEEEcCchhhhHHHHhh---cCCCeEEEeCCCCHHHHHHHHHhCCEEEEcCcccCCCChHHHHHHHCCCCEEECCC
Confidence            589999999987766554443   56678999999999999999999999999998 79999999999999999999999


Q ss_pred             CCccccccCCceEEe--CCCHHHHHHHHHHHHhcCC--CCCHHHHHHHHHhcCCHHHHHHHHHHHHH
Q 027511           82 GGVPEVLPDDMVVLA--EPDPGDMVLAIRKAISLLP--KIDPQVMHERMKKLYNWHDVAKRTEIVYD  144 (222)
Q Consensus        82 gg~~e~i~~~~~g~~--~~~~~~la~~i~~ll~~~~--~~~~~~~~~~~~~~fs~~~~~~~~~~~~~  144 (222)
                      |+..|++.++.+|+.  ..|+++++++|.++++++.  ..++.+++    +.++.+.+++++.++|+
T Consensus       296 ~~~~e~i~~~~~g~~~~~~d~~~l~~~i~~l~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~  358 (359)
T cd03823         296 GGMAELVRDGVNGLLFPPGDAEDLAAALERLIDDPDLLERLRAGIE----PPRSIEDQAEEYLKLYR  358 (359)
T ss_pred             CCHHHHhcCCCcEEEECCCCHHHHHHHHHHHHhChHHHHHHHHhHH----HhhhHHHHHHHHHHHhh
Confidence            999999999866643  3378999999999999765  33344443    33444889999988885

ExpE7 in Sinorhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucans (exopolysaccharide II).

>cd03811 GT1_WabH_like This family is most closely related to the GT1 family of glycosyltransferases

Probab=99.80  E-value=3.8e-19  Score=149.24  Aligned_cols=128  Identities=30%  Similarity=0.378  Sum_probs=107.0

Q ss_pred             CCceEEEEEcCCccHHHHHHHHHHcCCCCcEEEeCCCChhHHHHHHHhccEEEEcCCCccccHHHHHHHHhCCcEEEeCC
Q 027511            2 RVKVRFIVGGDGPKRVRLEEMREKHSLQDRVEMLGAVPHAQVRSVLISGHIFLNSSLTEAFCIAILEAASCGLLTVSTRV   81 (222)
Q Consensus         2 ~p~~~lvi~G~g~~~~~l~~~~~~~~l~~~V~~~g~v~~~~~~~ll~~adv~v~~s~~E~~g~~ilEAma~G~PvVa~~~   81 (222)
                      .++++|+++|.|+....++++++++++.++|.++|++  +++..+++.||++++||..|++|++++|||++|+|||+++.
T Consensus       218 ~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~v~~~g~~--~~~~~~~~~~d~~i~ps~~e~~~~~~~Ea~~~G~PvI~~~~  295 (353)
T cd03811         218 GPDARLVILGDGPLREELEALAKELGLADRVHFLGFQ--SNPYPYLKAADLFVLSSRYEGFPNVLLEAMALGTPVVATDC  295 (353)
T ss_pred             CCCceEEEEcCCccHHHHHHHHHhcCCCccEEEeccc--CCHHHHHHhCCEEEeCcccCCCCcHHHHHHHhCCCEEEcCC
Confidence            4689999999999999999999999999999999995  57889999999999999999999999999999999999999


Q ss_pred             CCccccccCCceEEeCC--CHHHH---HHHHHHHHhcCC--CCCHHHHHHHHHhcCC
Q 027511           82 GGVPEVLPDDMVVLAEP--DPGDM---VLAIRKAISLLP--KIDPQVMHERMKKLYN  131 (222)
Q Consensus        82 gg~~e~i~~~~~g~~~~--~~~~l---a~~i~~ll~~~~--~~~~~~~~~~~~~~fs  131 (222)
                      |+..|++.++.+|+..+  +++++   ++++..+.++++  ..++.++++.+.++|+
T Consensus       296 ~~~~e~i~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~  352 (353)
T cd03811         296 PGPREILEDGENGLLVPVGDEAALAAAALALLDLLLDPELRERLAAAARERVAREYS  352 (353)
T ss_pred             CChHHHhcCCCceEEECCCCHHHHHHHHHHHHhccCChHHHHHHHHHHHHHHHHHhc
Confidence            99999999998776443  67777   455555555544  3344446666666664

WabH in Klebsiella pneumoniae has been shown to transfer a GlcNAc residue from UDP-GlcNAc onto the acceptor GalUA residue in the cellular outer core.

>cd04950 GT1_like_1 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds

Probab=99.74  E-value=2.8e-17  Score=142.86  Aligned_cols=137  Identities=18%  Similarity=0.155  Sum_probs=103.0

Q ss_pred             CCceEEEEEcCCccHHHHHHHHHHcCCCCcEEEeCCCChhHHHHHHHhccEEEEcCCC-----ccccHHHHHHHHhCCcE
Q 027511            2 RVKVRFIVGGDGPKRVRLEEMREKHSLQDRVEMLGAVPHAQVRSVLISGHIFLNSSLT-----EAFCIAILEAASCGLLT   76 (222)
Q Consensus         2 ~p~~~lvi~G~g~~~~~l~~~~~~~~l~~~V~~~g~v~~~~~~~ll~~adv~v~~s~~-----E~~g~~ilEAma~G~Pv   76 (222)
                      +|+++|+++|+|+.......+    ...+||+|+|.++++++..+++.+|+++.|+..     +++|++++||||||+||
T Consensus       230 ~p~~~~vliG~~~~~~~~~~~----~~~~nV~~~G~~~~~~l~~~l~~~Dv~l~P~~~~~~~~~~~P~Kl~EylA~G~PV  305 (373)
T cd04950         230 RPDWSFVLIGPVDVSIDPSAL----LRLPNVHYLGPKPYKELPAYLAGFDVAILPFRLNELTRATSPLKLFEYLAAGKPV  305 (373)
T ss_pred             CCCCEEEEECCCcCccChhHh----ccCCCEEEeCCCCHHHHHHHHHhCCEEecCCccchhhhcCCcchHHHHhccCCCE
Confidence            689999999988333222221    224689999999999999999999999999863     46899999999999999


Q ss_pred             EEeCCCCccccccCCceEEeCCCHHHHHHHHHHHHhcCCCCCHHHHHHHHHhcCCHHHHHHHHHHHHHH
Q 027511           77 VSTRVGGVPEVLPDDMVVLAEPDPGDMVLAIRKAISLLPKIDPQVMHERMKKLYNWHDVAKRTEIVYDR  145 (222)
Q Consensus        77 Va~~~gg~~e~i~~~~~g~~~~~~~~la~~i~~ll~~~~~~~~~~~~~~~~~~fs~~~~~~~~~~~~~~  145 (222)
                      |+++.++..+...  ...+..+|+++++++|.+++............+ ..+.|||+..++++.+.+.+
T Consensus       306 Vat~~~~~~~~~~--~~~~~~~d~~~~~~ai~~~l~~~~~~~~~~~~~-~~~~~sW~~~a~~~~~~l~~  371 (373)
T cd04950         306 VATPLPEVRRYED--EVVLIADDPEEFVAAIEKALLEDGPARERRRLR-LAAQNSWDARAAEMLEALQE  371 (373)
T ss_pred             EecCcHHHHhhcC--cEEEeCCCHHHHHHHHHHHHhcCCchHHHHHHH-HHHHCCHHHHHHHHHHHHHh
Confidence            9998765544321  234556689999999999877654222222222 67889999999999966543

The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center

>TIGR02400 trehalose_OtsA alpha,alpha-trehalose-phosphate synthase [UDP-forming]

Probab=99.72  E-value=9.6e-17  Score=142.71  Aligned_cols=136  Identities=15%  Similarity=0.160  Sum_probs=106.6

Q ss_pred             eEEEEE-----cCCccHHHHHHHHHHc--------CC---CCcEEEeCCCChhHHHHHHHhccEEEEcCCCccccHHHHH
Q 027511            5 VRFIVG-----GDGPKRVRLEEMREKH--------SL---QDRVEMLGAVPHAQVRSVLISGHIFLNSSLTEAFCIAILE   68 (222)
Q Consensus         5 ~~lvi~-----G~g~~~~~l~~~~~~~--------~l---~~~V~~~g~v~~~~~~~ll~~adv~v~~s~~E~~g~~ilE   68 (222)
                      +.|+++     |+++.+..+++.++++        +.   .+.+.+.|.++.+++..+|+.||++|.||..|+||++++|
T Consensus       295 v~Lv~v~~p~rg~~~~~~~l~~~i~~lv~~in~~~~~~~~~pv~~l~~~~~~~el~aly~aaDv~vv~S~~EG~~Lv~lE  374 (456)
T TIGR02400       295 VVLVQIAVPSRGDVPEYQQLRRQVEELVGRINGRFGTLDWTPIRYLNRSYDREELMALYRAADVGLVTPLRDGMNLVAKE  374 (456)
T ss_pred             eEEEEEecCCccCchHHHHHHHHHHHHHHHHHhccCCCCCccEEEEcCCCCHHHHHHHHHhCcEEEECccccccCccHHH
Confidence            567777     4556666676666554        11   1234456788999999999999999999999999999999


Q ss_pred             HHHhCCc----EEEeCCCCccccccCCceEEeCC-CHHHHHHHHHHHHhcCC---CCCHHHHHHHHHhcCCHHHHHHHHH
Q 027511           69 AASCGLL----TVSTRVGGVPEVLPDDMVVLAEP-DPGDMVLAIRKAISLLP---KIDPQVMHERMKKLYNWHDVAKRTE  140 (222)
Q Consensus        69 Ama~G~P----vVa~~~gg~~e~i~~~~~g~~~~-~~~~la~~i~~ll~~~~---~~~~~~~~~~~~~~fs~~~~~~~~~  140 (222)
                      |||||+|    +|+|+.+|..+.+. + ..+++| |+++++++|.++++++.   +....+.++++.+ |++...++++.
T Consensus       375 amA~g~P~~g~vVlS~~~G~~~~l~-~-gllVnP~d~~~lA~aI~~aL~~~~~er~~r~~~~~~~v~~-~~~~~W~~~~l  451 (456)
T TIGR02400       375 YVAAQDPKDGVLILSEFAGAAQELN-G-ALLVNPYDIDGMADAIARALTMPLEEREERHRAMMDKLRK-NDVQRWREDFL  451 (456)
T ss_pred             HHHhcCCCCceEEEeCCCCChHHhC-C-cEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhh-CCHHHHHHHHH
Confidence            9999999    99999998888885 3 334445 99999999999999765   4556666777654 99999999877


Q ss_pred             HHH
Q 027511          141 IVY  143 (222)
Q Consensus       141 ~~~  143 (222)
                      +-+
T Consensus       452 ~~l  454 (456)
T TIGR02400       452 SDL  454 (456)
T ss_pred             HHh
Confidence            543

This enzyme catalyzes the key, penultimate step in biosynthesis of trehalose, a compatible solute made as an osmoprotectant in some species in all three domains of life. The gene symbol OtsA stands for osmotically regulated trehalose synthesis A. Trehalose helps protect against both osmotic and thermal stresses, and is made from two glucose subunits. This model excludes glucosylglycerol-phosphate synthase, an enzyme of an analogous osmoprotectant system in many cyanobacterial strains. This model does not identify archaeal examples, as they are more divergent than glucosylglycerol-phosphate synthase. Sequences that score in the gray zone between the trusted and noise cutoffs include a number of yeast multidomain proteins in which the N-terminal domain may be functionally equivalent to this family. The gray zone also includes the OtsA of Cornyebacterium glutamicum (and related species), shown to be responsib

>COG0438 RfaG Glycosyltransferase [Cell envelope biogenesis, outer membrane]

Probab=99.72  E-value=3e-16  Score=130.48  Aligned_cols=145  Identities=30%  Similarity=0.569  Sum_probs=123.9

Q ss_pred             ceEEEEEcCCcc-HHHHHHHHHHcCCCCcEEEeCCCChhHHHHHHHhccEEEEcCCCccccHHHHHHHHhCCcEEEeCCC
Q 027511            4 KVRFIVGGDGPK-RVRLEEMREKHSLQDRVEMLGAVPHAQVRSVLISGHIFLNSSLTEAFCIAILEAASCGLLTVSTRVG   82 (222)
Q Consensus         4 ~~~lvi~G~g~~-~~~l~~~~~~~~l~~~V~~~g~v~~~~~~~ll~~adv~v~~s~~E~~g~~ilEAma~G~PvVa~~~g   82 (222)
                      +++++++|.++. ...+..++++++..++|.|+|.++.+++..+++.+|++++||..|+||++++|||++|+|||+++.+
T Consensus       230 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~~~~~v~ps~~e~~~~~~~Ea~a~g~pvi~~~~~  309 (381)
T COG0438         230 DIKLVIVGDGPERREELEKLAKKLGLEDNVKFLGYVPDEELAELLASADVFVLPSLSEGFGLVLLEAMAAGTPVIASDVG  309 (381)
T ss_pred             CeEEEEEcCCCccHHHHHHHHHHhCCCCcEEEecccCHHHHHHHHHhCCEEEeccccccchHHHHHHHhcCCcEEECCCC
Confidence            478999999887 3677778888888889999999987888889999999999999999999999999999999999999


Q ss_pred             CccccccCCceE-EeCC-CHHHHHHHHHHHHhcCC--CCCHHHHHHHHHhcCCHHHHHHHHHHHHHHHhc
Q 027511           83 GVPEVLPDDMVV-LAEP-DPGDMVLAIRKAISLLP--KIDPQVMHERMKKLYNWHDVAKRTEIVYDRALE  148 (222)
Q Consensus        83 g~~e~i~~~~~g-~~~~-~~~~la~~i~~ll~~~~--~~~~~~~~~~~~~~fs~~~~~~~~~~~~~~~~~  148 (222)
                      +..+++.++..| +..+ +.+++++++..++++..  +......++.+...|+|+.+.+++.+++.....
T Consensus       310 ~~~e~~~~~~~g~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  379 (381)
T COG0438         310 GIPEVVEDGETGLLVPPGDVEELADALEQLLEDPELREELGEAARERVEEEFSWERIAEQLLELYEELLA  379 (381)
T ss_pred             ChHHHhcCCCceEecCCCCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHh
Confidence            999999998533 3443 58999999999998874  334444566666899999999999999987754

>PRK05749 3-deoxy-D-manno-octulosonic-acid transferase; Reviewed

Probab=99.71  E-value=3.6e-17  Score=144.37  Aligned_cols=143  Identities=17%  Similarity=0.113  Sum_probs=111.0

Q ss_pred             CCceEEEEEcCCccH-HHHHHHHHHcCCCCcEEEeCCC------------ChhHHHHHHHhccEE-EEcCCCccccHHHH
Q 027511            2 RVKVRFIVGGDGPKR-VRLEEMREKHSLQDRVEMLGAV------------PHAQVRSVLISGHIF-LNSSLTEAFCIAIL   67 (222)
Q Consensus         2 ~p~~~lvi~G~g~~~-~~l~~~~~~~~l~~~V~~~g~v------------~~~~~~~ll~~adv~-v~~s~~E~~g~~il   67 (222)
                      +|+++|+|+|+|+.+ ++++++++++++.. +.+.|..            +.+++..+|+.||++ +.+|..|++|.+++
T Consensus       260 ~~~~~liivG~g~~r~~~l~~~~~~~gl~~-~~~~~~~~~~~~~~v~l~~~~~el~~~y~~aDi~~v~~S~~e~~g~~~l  338 (425)
T PRK05749        260 FPNLLLILVPRHPERFKEVEELLKKAGLSY-VRRSQGEPPSADTDVLLGDTMGELGLLYAIADIAFVGGSLVKRGGHNPL  338 (425)
T ss_pred             CCCcEEEEcCCChhhHHHHHHHHHhCCCcE-EEccCCCCCCCCCcEEEEecHHHHHHHHHhCCEEEECCCcCCCCCCCHH
Confidence            689999999999987 78999999988752 3333311            146899999999995 55777899999999


Q ss_pred             HHHHhCCcEEEeCC-CCcccccc---CCceEEeCCCHHHHHHHHHHHHhcCC--CCCHHHHHHHHHhcCCHHHHHHHHHH
Q 027511           68 EAASCGLLTVSTRV-GGVPEVLP---DDMVVLAEPDPGDMVLAIRKAISLLP--KIDPQVMHERMKKLYNWHDVAKRTEI  141 (222)
Q Consensus        68 EAma~G~PvVa~~~-gg~~e~i~---~~~~g~~~~~~~~la~~i~~ll~~~~--~~~~~~~~~~~~~~fs~~~~~~~~~~  141 (222)
                      |||+||+|||+++. ++..|+..   +++.++...|+++++++|.+++++++  ..++.++++.+.++.   ..++++.+
T Consensus       339 EAma~G~PVI~g~~~~~~~e~~~~~~~~g~~~~~~d~~~La~~l~~ll~~~~~~~~m~~~a~~~~~~~~---~~~~~~~~  415 (425)
T PRK05749        339 EPAAFGVPVISGPHTFNFKEIFERLLQAGAAIQVEDAEDLAKAVTYLLTDPDARQAYGEAGVAFLKQNQ---GALQRTLQ  415 (425)
T ss_pred             HHHHhCCCEEECCCccCHHHHHHHHHHCCCeEEECCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHhCc---cHHHHHHH
Confidence            99999999998764 55555543   34445566799999999999999876  678888888887763   56677777


Q ss_pred             HHHHHhc
Q 027511          142 VYDRALE  148 (222)
Q Consensus       142 ~~~~~~~  148 (222)
                      ++...+.
T Consensus       416 ~l~~~l~  422 (425)
T PRK05749        416 LLEPYLP  422 (425)
T ss_pred             HHHHhcc
Confidence            7776544

>cd03788 GT1_TPS Trehalose-6-Phosphate Synthase (TPS) is a glycosyltransferase that catalyses the synthesis of alpha,alpha-1,1-trehalose-6-phosphate from glucose-6-phosphate using a UDP-glucose donor

Probab=99.69  E-value=1.2e-16  Score=142.62  Aligned_cols=135  Identities=15%  Similarity=0.182  Sum_probs=101.6

Q ss_pred             eEEEEEcC-----CccHHHHHHHHH----HcC-------CCCcEEEeCCCChhHHHHHHHhccEEEEcCCCccccHHHHH
Q 027511            5 VRFIVGGD-----GPKRVRLEEMRE----KHS-------LQDRVEMLGAVPHAQVRSVLISGHIFLNSSLTEAFCIAILE   68 (222)
Q Consensus         5 ~~lvi~G~-----g~~~~~l~~~~~----~~~-------l~~~V~~~g~v~~~~~~~ll~~adv~v~~s~~E~~g~~ilE   68 (222)
                      ++|+++|.     |+...++++.++    +.+       ..+.+.+.|.++.+++..+|+.||++|+||..|+||++++|
T Consensus       300 v~Lv~vg~~~~g~~~~~~~l~~~l~~~v~~in~~~g~~~~~~v~~~~g~v~~~el~~~y~~aDv~v~pS~~Eg~~lv~lE  379 (460)
T cd03788         300 VVLVQIAVPSRTDVPEYQELRREVEELVGRINGKFGTLDWTPVRYLYRSLPREELAALYRAADVALVTPLRDGMNLVAKE  379 (460)
T ss_pred             EEEEEEccCCCcCcHHHHHHHHHHHHHHHHHHhccCCCCceeEEEEeCCCCHHHHHHHHHhccEEEeCccccccCcccce
Confidence            67888864     344444444433    322       22333456889999999999999999999999999999999


Q ss_pred             HHHhCCc----EEEeCCCCccccccCCceEEeCC-CHHHHHHHHHHHHhcCC---CCCHHHHHHHHHhcCCHHHHHHHHH
Q 027511           69 AASCGLL----TVSTRVGGVPEVLPDDMVVLAEP-DPGDMVLAIRKAISLLP---KIDPQVMHERMKKLYNWHDVAKRTE  140 (222)
Q Consensus        69 Ama~G~P----vVa~~~gg~~e~i~~~~~g~~~~-~~~~la~~i~~ll~~~~---~~~~~~~~~~~~~~fs~~~~~~~~~  140 (222)
                      ||+||+|    ||+++.+|..+.. .+. .++.| |+++++++|.++++++.   +.+..++++.+ ..|+++..++++.
T Consensus       380 Ama~g~p~~g~vV~S~~~G~~~~~-~~g-~lv~p~d~~~la~ai~~~l~~~~~e~~~~~~~~~~~v-~~~~~~~w~~~~l  456 (460)
T cd03788         380 YVACQDDDPGVLILSEFAGAAEEL-SGA-LLVNPYDIDEVADAIHRALTMPLEERRERHRKLREYV-RTHDVQAWANSFL  456 (460)
T ss_pred             eEEEecCCCceEEEeccccchhhc-CCC-EEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHH-HhCCHHHHHHHHH
Confidence            9999999    9999988888773 222 34444 99999999999999864   44555566665 5699999998876


Q ss_pred             HH
Q 027511          141 IV  142 (222)
Q Consensus       141 ~~  142 (222)
                      +-
T Consensus       457 ~~  458 (460)
T cd03788         457 DD  458 (460)
T ss_pred             Hh
Confidence            53

It is a key enzyme in the trehalose synthesis pathway. Trehalose is a nonreducing disaccharide present in a wide variety of organisms and may serve as a source of energy and carbon. It is characterized most notably in insect, plant, and microbial cells. Its production is often associated with a variety of stress conditions, including desiccation, dehydration, heat, cold, and oxidation. This family represents the catalytic domain of the TPS. Some members of this domain family coexist with a C-terminal trehalose phosphatase domain.

>KOG1387 consensus Glycosyltransferase [Cell wall/membrane/envelope biogenesis]

Probab=99.62  E-value=9.9e-15  Score=121.78  Aligned_cols=148  Identities=18%  Similarity=0.204  Sum_probs=125.2

Q ss_pred             CceEEEEEcCCc---cH---HHHHHHHHHcCCCCcEEEeCCCChhHHHHHHHhccEEEEcCCCccccHHHHHHHHhCCcE
Q 027511            3 VKVRFIVGGDGP---KR---VRLEEMREKHSLQDRVEMLGAVPHAQVRSVLISGHIFLNSSLTEAFCIAILEAASCGLLT   76 (222)
Q Consensus         3 p~~~lvi~G~g~---~~---~~l~~~~~~~~l~~~V~~~g~v~~~~~~~ll~~adv~v~~s~~E~~g~~ilEAma~G~Pv   76 (222)
                      ++++|+++|+-.   +.   +.++.+++++.++++|.|.-.+|.+++..+|+.|.+.|++...|+||+.++|+||+|+-+
T Consensus       304 ~~iKL~ivGScRneeD~ervk~Lkd~a~~L~i~~~v~F~~N~Py~~lv~lL~~a~iGvh~MwNEHFGIsVVEyMAAGlIp  383 (465)
T KOG1387|consen  304 SPIKLIIVGSCRNEEDEERVKSLKDLAEELKIPKHVQFEKNVPYEKLVELLGKATIGVHTMWNEHFGISVVEYMAAGLIP  383 (465)
T ss_pred             CCceEEEEeccCChhhHHHHHHHHHHHHhcCCccceEEEecCCHHHHHHHhccceeehhhhhhhhcchhHHHHHhcCceE
Confidence            678999999532   22   456677899999999999999999999999999999999999999999999999999999


Q ss_pred             EEeCCCCcc-ccccCC---ceEEeCCCHHHHHHHHHHHHhcCC--CCCHHHHHHHHHhcCCHHHHHHHHHHHHHHHhcCC
Q 027511           77 VSTRVGGVP-EVLPDD---MVVLAEPDPGDMVLAIRKAISLLP--KIDPQVMHERMKKLYNWHDVAKRTEIVYDRALECP  150 (222)
Q Consensus        77 Va~~~gg~~-e~i~~~---~~g~~~~~~~~la~~i~~ll~~~~--~~~~~~~~~~~~~~fs~~~~~~~~~~~~~~~~~~~  150 (222)
                      |+.+.||+. +++.+.   .+||..++.++.++++.+++....  +.++++..+....+|+-..+.+.+.+.+..++.++
T Consensus       384 i~h~SgGP~lDIV~~~~G~~tGFla~t~~EYaE~iLkIv~~~~~~r~~~r~~AR~s~~RFsE~~F~kd~~~~i~kll~e~  463 (465)
T KOG1387|consen  384 IVHNSGGPLLDIVTPWDGETTGFLAPTDEEYAEAILKIVKLNYDERNMMRRNARKSLARFGELKFDKDWENPICKLLEEE  463 (465)
T ss_pred             EEeCCCCCceeeeeccCCccceeecCChHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHhhHHHHHHhHhHHHHHhhccc
Confidence            999998764 555543   568999999999999999998644  55566666666678999999999999998887654

>cd01635 Glycosyltransferase_GTB_type Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds

Probab=99.61  E-value=6.7e-15  Score=117.07  Aligned_cols=95  Identities=37%  Similarity=0.667  Sum_probs=84.3

Q ss_pred             CCceEEEEEcCCccHHHHHHHHHHcCCCCcEEEeCCC-ChhHHHHHHHhccEEEEcCCCccccHHHHHHHHhCCcEEEeC
Q 027511            2 RVKVRFIVGGDGPKRVRLEEMREKHSLQDRVEMLGAV-PHAQVRSVLISGHIFLNSSLTEAFCIAILEAASCGLLTVSTR   80 (222)
Q Consensus         2 ~p~~~lvi~G~g~~~~~l~~~~~~~~l~~~V~~~g~v-~~~~~~~ll~~adv~v~~s~~E~~g~~ilEAma~G~PvVa~~   80 (222)
                      .|+++++++|.+........++.+++..++|.++|.+ +.+++..++++||++++||..|++|++++|||+||+|+|+++
T Consensus       133 ~~~~~~~i~G~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~di~l~~~~~e~~~~~~~Eam~~g~pvi~s~  212 (229)
T cd01635         133 GPDLKLVIAGDGPEREYLEELLAALLLLDRVIFLGGLDPEELLALLLAAADVFVLPSLREGFGLVVLEAMACGLPVIATD  212 (229)
T ss_pred             CCCeEEEEEeCCCChHHHHHHHHhcCCcccEEEeCCCCcHHHHHHHhhcCCEEEecccccCcChHHHHHHhCCCCEEEcC
Confidence            4799999999998888888777888888999999998 455666666669999999999999999999999999999999


Q ss_pred             CCCccccccCCceEEe
Q 027511           81 VGGVPEVLPDDMVVLA   96 (222)
Q Consensus        81 ~gg~~e~i~~~~~g~~   96 (222)
                      .++..|++.++.+|+.
T Consensus       213 ~~~~~e~i~~~~~g~~  228 (229)
T cd01635         213 VGGPPEIVEDGLTGLL  228 (229)
T ss_pred             CCCcceEEECCCceEE
Confidence            9999999988877764

The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. The structures of the formed glycoconjugates are extremely diverse, reflecting a wide range of biological functions. The members of this family share a common GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.

>PLN03063 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional

Probab=99.61  E-value=5.4e-15  Score=139.18  Aligned_cols=137  Identities=13%  Similarity=0.159  Sum_probs=106.3

Q ss_pred             cCCccHHHHHHHHHHcC--CCCc--------EE-EeCCCChhHHHHHHHhccEEEEcCCCccccHHHHHHHHhCCc----
Q 027511           11 GDGPKRVRLEEMREKHS--LQDR--------VE-MLGAVPHAQVRSVLISGHIFLNSSLTEAFCIAILEAASCGLL----   75 (222)
Q Consensus        11 G~g~~~~~l~~~~~~~~--l~~~--------V~-~~g~v~~~~~~~ll~~adv~v~~s~~E~~g~~ilEAma~G~P----   75 (222)
                      |+++.++++++.++++.  +..+        |+ +.+.++.+++..+|+.||+||+||..|++|++++||||||+|    
T Consensus       326 ~~~~~y~~l~~~v~~l~g~In~~~g~~~~~pv~~l~~~v~~~el~aly~~ADvfvvtSlrEGmnLv~lEamA~g~p~~gv  405 (797)
T PLN03063        326 NDVPEYQKLKSQVHELVGRINGRFGSVSSVPIHHLDCSVDFNYLCALYAITDVMLVTSLRDGMNLVSYEFVACQKAKKGV  405 (797)
T ss_pred             CchHHHHHHHHHHHHHHHHhhcccccCCCceeEEecCCCCHHHHHHHHHhCCEEEeCccccccCcchhhHheeecCCCCC
Confidence            35566677777776653  2221        33 345889999999999999999999999999999999999999    


Q ss_pred             EEEeCCCCccccccCCceEEeCCCHHHHHHHHHHHHhcCC---CCCHHHHHHHHHhcCCHHHHHHHHHHHHHHHhc
Q 027511           76 TVSTRVGGVPEVLPDDMVVLAEPDPGDMVLAIRKAISLLP---KIDPQVMHERMKKLYNWHDVAKRTEIVYDRALE  148 (222)
Q Consensus        76 vVa~~~gg~~e~i~~~~~g~~~~~~~~la~~i~~ll~~~~---~~~~~~~~~~~~~~fs~~~~~~~~~~~~~~~~~  148 (222)
                      +|.|..+|..+.+..+...+.+.|+++++++|.++++.+.   +......++++ ..++|...++.+.+.++++..
T Consensus       406 lVlSe~~G~~~~l~~~allVnP~D~~~lA~AI~~aL~m~~~er~~r~~~~~~~v-~~~~~~~Wa~~fl~~l~~~~~  480 (797)
T PLN03063        406 LVLSEFAGAGQSLGAGALLVNPWNITEVSSAIKEALNMSDEERETRHRHNFQYV-KTHSAQKWADDFMSELNDIIV  480 (797)
T ss_pred             EEeeCCcCchhhhcCCeEEECCCCHHHHHHHHHHHHhCCHHHHHHHHHHHHHhh-hhCCHHHHHHHHHHHHHHHhh
Confidence            9999999999987444333334499999999999999654   33344455554 569999999999998887764

>PF13692 Glyco_trans_1_4: Glycosyl transferases group 1; PDB: 3OY2_A 3OY7_B 2Q6V_A 2HY7_A 3CV3_A 3CUY_A

Probab=99.60  E-value=1.6e-15  Score=112.85  Aligned_cols=102  Identities=25%  Similarity=0.407  Sum_probs=74.0

Q ss_pred             CCceEEEEEcCCccHHHHHHHHHHcCCCCcEEEeCCCChhHHHHHHHhccEEEEcCC-CccccHHHHHHHHhCCcEEEeC
Q 027511            2 RVKVRFIVGGDGPKRVRLEEMREKHSLQDRVEMLGAVPHAQVRSVLISGHIFLNSSL-TEAFCIAILEAASCGLLTVSTR   80 (222)
Q Consensus         2 ~p~~~lvi~G~g~~~~~l~~~~~~~~l~~~V~~~g~v~~~~~~~ll~~adv~v~~s~-~E~~g~~ilEAma~G~PvVa~~   80 (222)
                      +|+++|+|+|.++.  +++++     ..++|+++|++  +++.++++++|+++.|+. .++++.+++|||++|+|||+++
T Consensus        32 ~p~~~l~i~G~~~~--~l~~~-----~~~~v~~~g~~--~e~~~~l~~~dv~l~p~~~~~~~~~k~~e~~~~G~pvi~~~  102 (135)
T PF13692_consen   32 HPDIELIIIGNGPD--ELKRL-----RRPNVRFHGFV--EELPEILAAADVGLIPSRFNEGFPNKLLEAMAAGKPVIASD  102 (135)
T ss_dssp             STTEEEEEECESS---HHCCH-----HHCTEEEE-S---HHHHHHHHC-SEEEE-BSS-SCC-HHHHHHHCTT--EEEEH
T ss_pred             CcCEEEEEEeCCHH--HHHHh-----cCCCEEEcCCH--HHHHHHHHhCCEEEEEeeCCCcCcHHHHHHHHhCCCEEECC
Confidence            68999999999876  24444     23589999999  689999999999999986 6789999999999999999999


Q ss_pred             CCCcccccc-CCceEEeCCCHHHHHHHHHHHHhc
Q 027511           81 VGGVPEVLP-DDMVVLAEPDPGDMVLAIRKAISL  113 (222)
Q Consensus        81 ~gg~~e~i~-~~~~g~~~~~~~~la~~i~~ll~~  113 (222)
                      . +..++.. ++..++...|+++++++|.++++|
T Consensus       103 ~-~~~~~~~~~~~~~~~~~~~~~l~~~i~~l~~d  135 (135)
T PF13692_consen  103 N-GAEGIVEEDGCGVLVANDPEELAEAIERLLND  135 (135)
T ss_dssp             H-HCHCHS---SEEEE-TT-HHHHHHHHHHHHH-
T ss_pred             c-chhhheeecCCeEEECCCHHHHHHHHHHHhcC
Confidence            9 5666665 344455667999999999999875

>cd03793 GT1_Glycogen_synthase_GSY2_like Glycogen synthase, which is most closely related to the GT1 family of glycosyltransferases, catalyzes the transfer of a glucose molecule from UDP-glucose to a terminal branch of a glycogen molecule, a rate-limit step of glycogen biosynthesis

Probab=99.59  E-value=3.8e-15  Score=133.41  Aligned_cols=109  Identities=15%  Similarity=0.177  Sum_probs=85.6

Q ss_pred             hhHHHHHHHhccEEEEcCCCccccHHHHHHHHhCCcEEEeCCCCc----cccccCC--ceEEeC--------CCHHHHHH
Q 027511           40 HAQVRSVLISGHIFLNSSLTEAFCIAILEAASCGLLTVSTRVGGV----PEVLPDD--MVVLAE--------PDPGDMVL  105 (222)
Q Consensus        40 ~~~~~~ll~~adv~v~~s~~E~~g~~ilEAma~G~PvVa~~~gg~----~e~i~~~--~~g~~~--------~~~~~la~  105 (222)
                      ..++.++++.||++|+||.+|+||++++||||||+|||+|+.+|+    .|++.++  .++++.        .+++++++
T Consensus       465 g~~y~E~~~g~dl~v~PS~yE~fG~~~lEAma~G~PvI~t~~~gf~~~v~E~v~~~~~~gi~V~~r~~~~~~e~v~~La~  544 (590)
T cd03793         465 GLDYEEFVRGCHLGVFPSYYEPWGYTPAECTVMGIPSITTNLSGFGCFMEEHIEDPESYGIYIVDRRFKSPDESVQQLTQ  544 (590)
T ss_pred             CcchHHHhhhceEEEeccccCCCCcHHHHHHHcCCCEEEccCcchhhhhHHHhccCCCceEEEecCCccchHHHHHHHHH
Confidence            356889999999999999999999999999999999999999999    5555543  233443        14688888


Q ss_pred             HHHHHHhcCC-CCCH-HHHHHHHHhcCCHHHHHHHHHHHHHHHhc
Q 027511          106 AIRKAISLLP-KIDP-QVMHERMKKLYNWHDVAKRTEIVYDRALE  148 (222)
Q Consensus       106 ~i~~ll~~~~-~~~~-~~~~~~~~~~fs~~~~~~~~~~~~~~~~~  148 (222)
                      +|.++++.+. +.+. ....++..+.|+|+.++..|.+.|+-++.
T Consensus       545 ~m~~~~~~~~r~~~~~r~~~~r~s~~f~W~~~~~~Y~~A~~~Al~  589 (590)
T cd03793         545 YMYEFCQLSRRQRIIQRNRTERLSDLLDWRNLGRYYRKARQLALS  589 (590)
T ss_pred             HHHHHhCCcHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHhh
Confidence            8888885543 2222 23344677889999999999999988764

GSY2, the member of this family in S. cerevisiae, has been shown to possess glycogen synthase activity.

>PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional

Probab=99.58  E-value=6.7e-15  Score=138.01  Aligned_cols=141  Identities=21%  Similarity=0.315  Sum_probs=109.0

Q ss_pred             ceEEEEEc----CC-ccHHHHHHHHHHc--------C---CCCcEEEeCCCChhHHHHHHHhccEEEEcCCCccccHHHH
Q 027511            4 KVRFIVGG----DG-PKRVRLEEMREKH--------S---LQDRVEMLGAVPHAQVRSVLISGHIFLNSSLTEAFCIAIL   67 (222)
Q Consensus         4 ~~~lvi~G----~g-~~~~~l~~~~~~~--------~---l~~~V~~~g~v~~~~~~~ll~~adv~v~~s~~E~~g~~il   67 (222)
                      +++|+++|    +| +.+.++++.++++        +   ....+.+.|.++.+++..+|+.||+++.||..|+||++++
T Consensus       300 ~v~lv~v~~~sr~~~~~~~~l~~~~~~~v~~in~~~~~~~~~pv~~~~~~~~~~~l~~ly~~aDv~v~~S~~EG~~lv~~  379 (726)
T PRK14501        300 KVRLVQVAVPSRTGVPQYQEMKREIDELVGRINGEFGTVDWTPIHYFYRSLPFEELVALYRAADVALVTPLRDGMNLVAK  379 (726)
T ss_pred             CEEEEEEecCCCcchHHHHHHHHHHHHHHHHHHhhcCCCCcceEEEEeCCCCHHHHHHHHHhccEEEecccccccCcccc
Confidence            37888887    33 4444555544432        1   1223557899999999999999999999999999999999


Q ss_pred             HHHHh-----CCcEEEeCCCCccccccCCceEEeCC-CHHHHHHHHHHHHhcCC---CCCHHHHHHHHHhcCCHHHHHHH
Q 027511           68 EAASC-----GLLTVSTRVGGVPEVLPDDMVVLAEP-DPGDMVLAIRKAISLLP---KIDPQVMHERMKKLYNWHDVAKR  138 (222)
Q Consensus        68 EAma~-----G~PvVa~~~gg~~e~i~~~~~g~~~~-~~~~la~~i~~ll~~~~---~~~~~~~~~~~~~~fs~~~~~~~  138 (222)
                      |||+|     |.||++...|+..++..   ..+++| |+++++++|.+++.++.   .....++++.+ ..|||+..+++
T Consensus       380 Eama~~~~~~g~~vls~~~G~~~~l~~---~llv~P~d~~~la~ai~~~l~~~~~e~~~r~~~~~~~v-~~~~~~~w~~~  455 (726)
T PRK14501        380 EYVASRTDGDGVLILSEMAGAAAELAE---ALLVNPNDIEGIAAAIKRALEMPEEEQRERMQAMQERL-RRYDVHKWASD  455 (726)
T ss_pred             eEEEEcCCCCceEEEecccchhHHhCc---CeEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHH-HhCCHHHHHHH
Confidence            99999     55777877888888752   234455 99999999999998764   33445667776 57999999999


Q ss_pred             HHHHHHHHhc
Q 027511          139 TEIVYDRALE  148 (222)
Q Consensus       139 ~~~~~~~~~~  148 (222)
                      +.+.|+++..
T Consensus       456 ~l~~l~~~~~  465 (726)
T PRK14501        456 FLDELREAAE  465 (726)
T ss_pred             HHHHHHHHHh
Confidence            9999998854

>TIGR03713 acc_sec_asp1 accessory Sec system protein Asp1

Probab=99.53  E-value=7.9e-14  Score=125.72  Aligned_cols=138  Identities=10%  Similarity=0.084  Sum_probs=119.6

Q ss_pred             CCCceEEEEEcCCccH---HHHHHHHHHcCCC-----------------------------CcEEEeCCCChhHHHHHHH
Q 027511            1 MRVKVRFIVGGDGPKR---VRLEEMREKHSLQ-----------------------------DRVEMLGAVPHAQVRSVLI   48 (222)
Q Consensus         1 ~~p~~~lvi~G~g~~~---~~l~~~~~~~~l~-----------------------------~~V~~~g~v~~~~~~~ll~   48 (222)
                      ++|+++|.+.|.|...   ..++++++++++.                             ++|.|.|..+..++.+.|.
T Consensus       348 ~~p~~~L~~~gy~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~f~gy~~e~dl~~~~~  427 (519)
T TIGR03713       348 KNPDYELKILTYNNDNDITQLLEDILEQINEEYNQDKNFFSLSEQDENQPILQTDEEQKEKERIAFTTLTNEEDLISALD  427 (519)
T ss_pred             hCCCeEEEEEEecCchhHHHHHHHHHHHHHhhhchhhhccccchhhhhhhcccchhhcccccEEEEEecCCHHHHHHHHh
Confidence            4799999999976533   6777777777666                             7999999988889999999


Q ss_pred             hccEEEEcCCCccccHHHHHHHHhCCcEEEeCCCCccccccCCceEEeCCCHHHHHHHHHHHHhcCC--CCCHHHHHHHH
Q 027511           49 SGHIFLNSSLTEAFCIAILEAASCGLLTVSTRVGGVPEVLPDDMVVLAEPDPGDMVLAIRKAISLLP--KIDPQVMHERM  126 (222)
Q Consensus        49 ~adv~v~~s~~E~~g~~ilEAma~G~PvVa~~~gg~~e~i~~~~~g~~~~~~~~la~~i~~ll~~~~--~~~~~~~~~~~  126 (222)
                      .+.++|.+|..|+|+ +.+||++.|+|+|   .-|..++|.++.+|++.+|..++++++..++.++.  +.....+.+.+
T Consensus       428 ~arl~id~s~~eg~~-~~ieAiS~GiPqI---nyg~~~~V~d~~NG~li~d~~~l~~al~~~L~~~~~wn~~~~~sy~~~  503 (519)
T TIGR03713       428 KLRLIIDLSKEPDLY-TQISGISAGIPQI---NKVETDYVEHNKNGYIIDDISELLKALDYYLDNLKNWNYSLAYSIKLI  503 (519)
T ss_pred             hheEEEECCCCCChH-HHHHHHHcCCCee---ecCCceeeEcCCCcEEeCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHH
Confidence            999999999999999 9999999999999   55678999999999988999999999999999986  55666666555


Q ss_pred             HhcCCHHHHHHHHHHHH
Q 027511          127 KKLYNWHDVAKRTEIVY  143 (222)
Q Consensus       127 ~~~fs~~~~~~~~~~~~  143 (222)
                       +.||-+.+.+++.+++
T Consensus       504 -~~yS~~~i~~kW~~~~  519 (519)
T TIGR03713       504 -DDYSSENIIERLNELI  519 (519)
T ss_pred             -HHhhHHHHHHHHHhhC
Confidence             7799999999988753

This protein is designated Asp1 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown.

>PRK13609 diacylglycerol glucosyltransferase; Provisional

Probab=99.52  E-value=1e-13  Score=120.60  Aligned_cols=136  Identities=13%  Similarity=0.126  Sum_probs=101.7

Q ss_pred             CCceEEEEE-cCC-ccHHHHHHHHHHcCCCCcEEEeCCCChhHHHHHHHhccEEEEcCCCccccHHHHHHHHhCCcEEEe
Q 027511            2 RVKVRFIVG-GDG-PKRVRLEEMREKHSLQDRVEMLGAVPHAQVRSVLISGHIFLNSSLTEAFCIAILEAASCGLLTVST   79 (222)
Q Consensus         2 ~p~~~lvi~-G~g-~~~~~l~~~~~~~~l~~~V~~~g~v~~~~~~~ll~~adv~v~~s~~E~~g~~ilEAma~G~PvVa~   79 (222)
                      .|+++++++ |.+ +.++.+++++++++  ++|+|+|++  +++..+|+.||++|.    ++.|++++|||+||+|||++
T Consensus       228 ~~~~~~viv~G~~~~~~~~l~~~~~~~~--~~v~~~g~~--~~~~~l~~~aD~~v~----~~gg~t~~EA~a~g~PvI~~  299 (380)
T PRK13609        228 VPDLQVVVVCGKNEALKQSLEDLQETNP--DALKVFGYV--ENIDELFRVTSCMIT----KPGGITLSEAAALGVPVILY  299 (380)
T ss_pred             CCCcEEEEEeCCCHHHHHHHHHHHhcCC--CcEEEEech--hhHHHHHHhccEEEe----CCCchHHHHHHHhCCCEEEC
Confidence            368898876 433 34577777776654  689999997  568999999999984    56699999999999999997


Q ss_pred             C-CCCcc----ccccCCceEEeCCCHHHHHHHHHHHHhcCC--CCCHHHHHHHHHhcCCHHHHHHHHHHHHHHH
Q 027511           80 R-VGGVP----EVLPDDMVVLAEPDPGDMVLAIRKAISLLP--KIDPQVMHERMKKLYNWHDVAKRTEIVYDRA  146 (222)
Q Consensus        80 ~-~gg~~----e~i~~~~~g~~~~~~~~la~~i~~ll~~~~--~~~~~~~~~~~~~~fs~~~~~~~~~~~~~~~  146 (222)
                      + .+|..    +++.+.+.++...|+++++++|.+++++++  ..++.+++ ...+.++++.+++.+.+.+...
T Consensus       300 ~~~~g~~~~n~~~~~~~G~~~~~~~~~~l~~~i~~ll~~~~~~~~m~~~~~-~~~~~~s~~~i~~~i~~~~~~~  372 (380)
T PRK13609        300 KPVPGQEKENAMYFERKGAAVVIRDDEEVFAKTEALLQDDMKLLQMKEAMK-SLYLPEPADHIVDDILAENHVE  372 (380)
T ss_pred             CCCCCcchHHHHHHHhCCcEEEECCHHHHHHHHHHHHCCHHHHHHHHHHHH-HhCCCchHHHHHHHHHHhhhhh
Confidence            6 45432    244444555667799999999999999876  44444444 3456689999999988877543

>PRK09814 beta-1,6-galactofuranosyltransferase; Provisional

Probab=99.51  E-value=6.8e-14  Score=119.96  Aligned_cols=115  Identities=8%  Similarity=-0.015  Sum_probs=90.8

Q ss_pred             CCceEEEEEcCCccHHHHHHHHHHcCCCCcEEEeCCCChhHHHHHHHhccEEEEcCC-----------CccccHHHHHHH
Q 027511            2 RVKVRFIVGGDGPKRVRLEEMREKHSLQDRVEMLGAVPHAQVRSVLISGHIFLNSSL-----------TEAFCIAILEAA   70 (222)
Q Consensus         2 ~p~~~lvi~G~g~~~~~l~~~~~~~~l~~~V~~~g~v~~~~~~~ll~~adv~v~~s~-----------~E~~g~~ilEAm   70 (222)
                      .|+++|+|+|+|+...         ...++|.|+|+++.+++..+|+. ++.+.+..           .-.+|.++.|+|
T Consensus       188 ~~~~~l~i~G~g~~~~---------~~~~~V~f~G~~~~eel~~~l~~-~~gLv~~~~~~~~~~~~y~~~~~P~K~~~ym  257 (333)
T PRK09814        188 SQGIKLTVFGPNPEDL---------ENSANISYKGWFDPEELPNELSK-GFGLVWDGDTNDGEYGEYYKYNNPHKLSLYL  257 (333)
T ss_pred             CCCCeEEEECCCcccc---------ccCCCeEEecCCCHHHHHHHHhc-CcCeEEcCCCCCccchhhhhccchHHHHHHH
Confidence            4789999999998654         34578999999999999999998 65443321           236789999999


Q ss_pred             HhCCcEEEeCCCCccccccCCceEEeCCCHHHHHHHHHHHHhcCCCCCHHHHHHHH
Q 027511           71 SCGLLTVSTRVGGVPEVLPDDMVVLAEPDPGDMVLAIRKAISLLPKIDPQVMHERM  126 (222)
Q Consensus        71 a~G~PvVa~~~gg~~e~i~~~~~g~~~~~~~~la~~i~~ll~~~~~~~~~~~~~~~  126 (222)
                      |||+|||+++.++..+++.++..|++.++.+++++++.++.+.....++.++++..
T Consensus       258 A~G~PVI~~~~~~~~~~V~~~~~G~~v~~~~el~~~l~~~~~~~~~~m~~n~~~~~  313 (333)
T PRK09814        258 AAGLPVIVWSKAAIADFIVENGLGFVVDSLEELPEIIDNITEEEYQEMVENVKKIS  313 (333)
T ss_pred             HCCCCEEECCCccHHHHHHhCCceEEeCCHHHHHHHHHhcCHHHHHHHHHHHHHHH
Confidence            99999999999999999999999999888899999998864322144555555443

>COG0297 GlgA Glycogen synthase [Carbohydrate transport and metabolism]

Probab=99.51  E-value=7e-13  Score=117.89  Aligned_cols=145  Identities=20%  Similarity=0.279  Sum_probs=115.3

Q ss_pred             eEEEEEcCCcc--HHHHHHHHHHcCCCCcEEEeCCCChhHHHHHHHhccEEEEcCCCccccHHHHHHHHhCCcEEEeCCC
Q 027511            5 VRFIVGGDGPK--RVRLEEMREKHSLQDRVEMLGAVPHAQVRSVLISGHIFLNSSLTEAFCIAILEAASCGLLTVSTRVG   82 (222)
Q Consensus         5 ~~lvi~G~g~~--~~~l~~~~~~~~l~~~V~~~g~v~~~~~~~ll~~adv~v~~s~~E~~g~~ilEAma~G~PvVa~~~g   82 (222)
                      ++++|.|.|+.  ...+..+++++.  +++...-..+..-...++..+|+++.||++|+||++-++||.+|+++|+..+|
T Consensus       324 ~~~vilG~gd~~le~~~~~la~~~~--~~~~~~i~~~~~la~~i~agaD~~lmPSrfEPcGL~ql~amryGtvpIv~~tG  401 (487)
T COG0297         324 WQLVLLGTGDPELEEALRALASRHP--GRVLVVIGYDEPLAHLIYAGADVILMPSRFEPCGLTQLYAMRYGTLPIVRETG  401 (487)
T ss_pred             ceEEEEecCcHHHHHHHHHHHHhcC--ceEEEEeeecHHHHHHHHhcCCEEEeCCcCcCCcHHHHHHHHcCCcceEcccC
Confidence            78999999832  245555666654  36777666667778899999999999999999999999999999999999999


Q ss_pred             CccccccC--------CceE--EeCCCHHHHHHHHHHHHhcCC-CCC--HHHHHHHHHhcCCHHHHHHHHHHHHHHHhcC
Q 027511           83 GVPEVLPD--------DMVV--LAEPDPGDMVLAIRKAISLLP-KID--PQVMHERMKKLYNWHDVAKRTEIVYDRALEC  149 (222)
Q Consensus        83 g~~e~i~~--------~~~g--~~~~~~~~la~~i~~ll~~~~-~~~--~~~~~~~~~~~fs~~~~~~~~~~~~~~~~~~  149 (222)
                      |++|+|.+        ..+|  |..+++++++.+|.+++.-.. ..+  ..-........|+|+..+.++.++|+.+++.
T Consensus       402 GLadTV~~~~~~~~~~~gtGf~f~~~~~~~l~~al~rA~~~y~~~~~~w~~~~~~~m~~d~sw~~sa~~y~~lY~~~~~~  481 (487)
T COG0297         402 GLADTVVDRNEWLIQGVGTGFLFLQTNPDHLANALRRALVLYRAPPLLWRKVQPNAMGADFSWDLSAKEYVELYKPLLSK  481 (487)
T ss_pred             CccceecCccchhccCceeEEEEecCCHHHHHHHHHHHHHHhhCCHHHHHHHHHhhcccccCchhHHHHHHHHHHHHhcc
Confidence            99999986        2445  566699999999999998765 333  2222233335899999999999999999875


Q ss_pred             CC
Q 027511          150 PN  151 (222)
Q Consensus       150 ~~  151 (222)
                      +.
T Consensus       482 ~~  483 (487)
T COG0297         482 PF  483 (487)
T ss_pred             cc
Confidence            43

>PF13524 Glyco_trans_1_2: Glycosyl transferases group 1

Probab=99.50  E-value=4.7e-14  Score=98.55  Aligned_cols=89  Identities=24%  Similarity=0.334  Sum_probs=82.7

Q ss_pred             EEEEcCCCccccHHHHHHHHhCCcEEEeCCCCccccccCCceEEeCCCHHHHHHHHHHHHhcCC--CCCHHHHHHHHHhc
Q 027511           52 IFLNSSLTEAFCIAILEAASCGLLTVSTRVGGVPEVLPDDMVVLAEPDPGDMVLAIRKAISLLP--KIDPQVMHERMKKL  129 (222)
Q Consensus        52 v~v~~s~~E~~g~~ilEAma~G~PvVa~~~gg~~e~i~~~~~g~~~~~~~~la~~i~~ll~~~~--~~~~~~~~~~~~~~  129 (222)
                      ++++|+...+++.+++|+||||+|||+.+.+++.+++.++..++...|++++.+++..+++++.  +.+..++++.+.++
T Consensus         1 i~Ln~~~~~~~~~r~~E~~a~G~~vi~~~~~~~~~~~~~~~~~~~~~~~~el~~~i~~ll~~~~~~~~ia~~a~~~v~~~   80 (92)
T PF13524_consen    1 INLNPSRSDGPNMRIFEAMACGTPVISDDSPGLREIFEDGEHIITYNDPEELAEKIEYLLENPEERRRIAKNARERVLKR   80 (92)
T ss_pred             CEeeCCCCCCCchHHHHHHHCCCeEEECChHHHHHHcCCCCeEEEECCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHh
Confidence            4678999999999999999999999999999999999999888877799999999999999987  78899999999999


Q ss_pred             CCHHHHHHHHH
Q 027511          130 YNWHDVAKRTE  140 (222)
Q Consensus       130 fs~~~~~~~~~  140 (222)
                      |+|+..++++.
T Consensus        81 ~t~~~~~~~il   91 (92)
T PF13524_consen   81 HTWEHRAEQIL   91 (92)
T ss_pred             CCHHHHHHHHH
Confidence            99999999875

>PRK13608 diacylglycerol glucosyltransferase; Provisional

Probab=99.49  E-value=3.2e-13  Score=118.20  Aligned_cols=138  Identities=10%  Similarity=0.084  Sum_probs=102.4

Q ss_pred             CCceEEEEE-cCCccHHHHHHHHHHcCCCCcEEEeCCCChhHHHHHHHhccEEEEcCCCccccHHHHHHHHhCCcEEEeC
Q 027511            2 RVKVRFIVG-GDGPKRVRLEEMREKHSLQDRVEMLGAVPHAQVRSVLISGHIFLNSSLTEAFCIAILEAASCGLLTVSTR   80 (222)
Q Consensus         2 ~p~~~lvi~-G~g~~~~~l~~~~~~~~l~~~V~~~g~v~~~~~~~ll~~adv~v~~s~~E~~g~~ilEAma~G~PvVa~~   80 (222)
                      .++++++++ |.+.  +..+++.+.++..++|.++|++  +++.++|+.||++|.    ++.|+++.|||++|+|+|+++
T Consensus       229 ~~~~~~vvv~G~~~--~l~~~l~~~~~~~~~v~~~G~~--~~~~~~~~~aDl~I~----k~gg~tl~EA~a~G~PvI~~~  300 (391)
T PRK13608        229 SANAQVVMICGKSK--ELKRSLTAKFKSNENVLILGYT--KHMNEWMASSQLMIT----KPGGITISEGLARCIPMIFLN  300 (391)
T ss_pred             CCCceEEEEcCCCH--HHHHHHHHHhccCCCeEEEecc--chHHHHHHhhhEEEe----CCchHHHHHHHHhCCCEEECC
Confidence            367888666 4432  2233344444555689999997  689999999999995    457899999999999999986


Q ss_pred             C-CC----ccccccCCceEEeCCCHHHHHHHHHHHHhcCC--CCCHHHHHHHHHhcCCHHHHHHHHHHHHHHHhc
Q 027511           81 V-GG----VPEVLPDDMVVLAEPDPGDMVLAIRKAISLLP--KIDPQVMHERMKKLYNWHDVAKRTEIVYDRALE  148 (222)
Q Consensus        81 ~-gg----~~e~i~~~~~g~~~~~~~~la~~i~~ll~~~~--~~~~~~~~~~~~~~fs~~~~~~~~~~~~~~~~~  148 (222)
                      . +|    ...++.+.+.++...|+++++++|.+++++++  ..++.++++. .+.|+++.+++.+.+++..+.+
T Consensus       301 ~~pgqe~~N~~~~~~~G~g~~~~~~~~l~~~i~~ll~~~~~~~~m~~~~~~~-~~~~s~~~i~~~l~~l~~~~~~  374 (391)
T PRK13608        301 PAPGQELENALYFEEKGFGKIADTPEEAIKIVASLTNGNEQLTNMISTMEQD-KIKYATQTICRDLLDLIGHSSQ  374 (391)
T ss_pred             CCCCcchhHHHHHHhCCcEEEeCCHHHHHHHHHHHhcCHHHHHHHHHHHHHh-cCCCCHHHHHHHHHHHhhhhhh
Confidence            4 33    22244455667777899999999999998876  4566666654 4569999999999998875543

>TIGR00236 wecB UDP-N-acetylglucosamine 2-epimerase

Probab=99.45  E-value=6e-13  Score=115.22  Aligned_cols=108  Identities=16%  Similarity=0.121  Sum_probs=86.9

Q ss_pred             CCceEEEEEcCCccHHHHHHHHHHcCCCCcEEEeCCCChhHHHHHHHhccEEEEcCCCccccHHHHHHHHhCCcEEEe-C
Q 027511            2 RVKVRFIVGGDGPKRVRLEEMREKHSLQDRVEMLGAVPHAQVRSVLISGHIFLNSSLTEAFCIAILEAASCGLLTVST-R   80 (222)
Q Consensus         2 ~p~~~lvi~G~g~~~~~l~~~~~~~~l~~~V~~~g~v~~~~~~~ll~~adv~v~~s~~E~~g~~ilEAma~G~PvVa~-~   80 (222)
                      +|++++++.|.+.. ...+.+.+.++..++|.|+|.++..++..+++.+|+++.+|     |..++|||+||+|||++ +
T Consensus       228 ~~~~~~vi~~~~~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~ad~vv~~S-----g~~~~EA~a~g~PvI~~~~  301 (365)
T TIGR00236       228 FEDVQIVYPVHLNP-VVREPLHKHLGDSKRVHLIEPLEYLDFLNLAANSHLILTDS-----GGVQEEAPSLGKPVLVLRD  301 (365)
T ss_pred             CCCCEEEEECCCCh-HHHHHHHHHhCCCCCEEEECCCChHHHHHHHHhCCEEEECC-----hhHHHHHHHcCCCEEECCC
Confidence            57889988864322 22223444456667899999999999999999999999877     56789999999999995 7


Q ss_pred             CCCccccccCCceEEeCCCHHHHHHHHHHHHhcCC
Q 027511           81 VGGVPEVLPDDMVVLAEPDPGDMVLAIRKAISLLP  115 (222)
Q Consensus        81 ~gg~~e~i~~~~~g~~~~~~~~la~~i~~ll~~~~  115 (222)
                      .|+.+|++..+.++++..|++++++++.++++++.
T Consensus       302 ~~~~~e~~~~g~~~lv~~d~~~i~~ai~~ll~~~~  336 (365)
T TIGR00236       302 TTERPETVEAGTNKLVGTDKENITKAAKRLLTDPD  336 (365)
T ss_pred             CCCChHHHhcCceEEeCCCHHHHHHHHHHHHhChH
Confidence            78899999877777776799999999999998754

Epimerase activity was also demonstrated in a bifunctional rat enzyme, for which the N-terminal domain appears to be orthologous. The set of proteins found above the suggested cutoff includes E. coli WecB in one of two deeply branched clusters and the rat UDP-N-acetylglucosamine 2-epimerase domain in the other.

>PLN02605 monogalactosyldiacylglycerol synthase

Probab=99.44  E-value=1e-12  Score=114.69  Aligned_cols=127  Identities=13%  Similarity=0.078  Sum_probs=88.1

Q ss_pred             CceE-EEEEcCCcc-HHHHHHHHHHcCCCCcEEEeCCCChhHHHHHHHhccEEEEcCCCccccHHHHHHHHhCCcEEEeC
Q 027511            3 VKVR-FIVGGDGPK-RVRLEEMREKHSLQDRVEMLGAVPHAQVRSVLISGHIFLNSSLTEAFCIAILEAASCGLLTVSTR   80 (222)
Q Consensus         3 p~~~-lvi~G~g~~-~~~l~~~~~~~~l~~~V~~~g~v~~~~~~~ll~~adv~v~~s~~E~~g~~ilEAma~G~PvVa~~   80 (222)
                      ++.+ ++++|+++. ++.+++.    ....+|.|+|++  +++.++|+.||++|.++    .|++++|||+||+|+|+++
T Consensus       240 ~~~~~~vi~G~~~~~~~~L~~~----~~~~~v~~~G~~--~~~~~l~~aaDv~V~~~----g~~ti~EAma~g~PvI~~~  309 (382)
T PLN02605        240 PIGQVVVICGRNKKLQSKLESR----DWKIPVKVRGFV--TNMEEWMGACDCIITKA----GPGTIAEALIRGLPIILNG  309 (382)
T ss_pred             CCceEEEEECCCHHHHHHHHhh----cccCCeEEEecc--ccHHHHHHhCCEEEECC----CcchHHHHHHcCCCEEEec
Confidence            5565 667787632 3334332    334579999998  57999999999999754    4789999999999999998


Q ss_pred             C------CCccccccCCceEEeCCCHHHHHHHHHHHHhc-CC--CCCHHHHHHHHHhcCCHHHHHHHHHH
Q 027511           81 V------GGVPEVLPDDMVVLAEPDPGDMVLAIRKAISL-LP--KIDPQVMHERMKKLYNWHDVAKRTEI  141 (222)
Q Consensus        81 ~------gg~~e~i~~~~~g~~~~~~~~la~~i~~ll~~-~~--~~~~~~~~~~~~~~fs~~~~~~~~~~  141 (222)
                      .      |+. +.+.+++.++...|+++++++|.+++++ ++  +.++.++++. ....+.+.+++.+.+
T Consensus       310 ~~pgqe~gn~-~~i~~~g~g~~~~~~~~la~~i~~ll~~~~~~~~~m~~~~~~~-~~~~a~~~i~~~l~~  377 (382)
T PLN02605        310 YIPGQEEGNV-PYVVDNGFGAFSESPKEIARIVAEWFGDKSDELEAMSENALKL-ARPEAVFDIVHDLHE  377 (382)
T ss_pred             CCCccchhhH-HHHHhCCceeecCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHh-cCCchHHHHHHHHHH
Confidence            4      444 3344455566668999999999999987 44  3444444433 344555666655543

>cd03785 GT1_MurG MurG is an N-acetylglucosaminyltransferase, the last enzyme involved in the intracellular phase of peptidoglycan biosynthesis

Probab=99.39  E-value=1.3e-12  Score=112.00  Aligned_cols=123  Identities=11%  Similarity=0.103  Sum_probs=89.3

Q ss_pred             CceE-EEEEcCCccHHHHHHHHHHcCCCCcEEEeCCCChhHHHHHHHhccEEEEcCCCccccHHHHHHHHhCCcEEEeCC
Q 027511            3 VKVR-FIVGGDGPKRVRLEEMREKHSLQDRVEMLGAVPHAQVRSVLISGHIFLNSSLTEAFCIAILEAASCGLLTVSTRV   81 (222)
Q Consensus         3 p~~~-lvi~G~g~~~~~l~~~~~~~~l~~~V~~~g~v~~~~~~~ll~~adv~v~~s~~E~~g~~ilEAma~G~PvVa~~~   81 (222)
                      ++++ ++++|+| ..+++++.++++  .++|.+.|++  +++..+|+.||++|.++.    +++++|||++|+|||+++.
T Consensus       210 ~~~~~~~i~G~g-~~~~l~~~~~~~--~~~v~~~g~~--~~~~~~l~~ad~~v~~sg----~~t~~Eam~~G~Pvv~~~~  280 (350)
T cd03785         210 KRLQVIHQTGKG-DLEEVKKAYEEL--GVNYEVFPFI--DDMAAAYAAADLVISRAG----ASTVAELAALGLPAILIPL  280 (350)
T ss_pred             cCeEEEEEcCCc-cHHHHHHHHhcc--CCCeEEeehh--hhHHHHHHhcCEEEECCC----HhHHHHHHHhCCCEEEeec
Confidence            4555 4577888 667888888776  4789999997  899999999999998662    6899999999999999876


Q ss_pred             CC--------ccccccCCceEEe-CC---CHHHHHHHHHHHHhcCC--CCCHHHHHHHHHhcCCHHHH
Q 027511           82 GG--------VPEVLPDDMVVLA-EP---DPGDMVLAIRKAISLLP--KIDPQVMHERMKKLYNWHDV  135 (222)
Q Consensus        82 gg--------~~e~i~~~~~g~~-~~---~~~~la~~i~~ll~~~~--~~~~~~~~~~~~~~fs~~~~  135 (222)
                      ++        ..+.+.++..|+. .+   |+++++++|.+++++++  +.++.++++.+ +.+.-+++
T Consensus       281 ~~~~~~~~~~~~~~l~~~g~g~~v~~~~~~~~~l~~~i~~ll~~~~~~~~~~~~~~~~~-~~~~~~~i  347 (350)
T cd03785         281 PYAADDHQTANARALVKAGAAVLIPQEELTPERLAAALLELLSDPERLKAMAEAARSLA-RPDAAERI  347 (350)
T ss_pred             CCCCCCcHHHhHHHHHhCCCEEEEecCCCCHHHHHHHHHHHhcCHHHHHHHHHHHHhcC-CCCHHHHH
Confidence            54        2355555555543 32   79999999999998755  44455554443 23443333

It transfers N-acetyl-D-glucosamine (GlcNAc) from UDP-GlcNAc to the C4 hydroxyl of a lipid-linked N-acetylmuramoyl pentapeptide (NAM). The resulting disaccharide is then transported across the cell membrane, where it is polymerized into NAG-NAM cell-wall repeat structure. MurG belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains, each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.

>PRK00726 murG undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase; Provisional

Probab=99.34  E-value=9.4e-12  Score=107.29  Aligned_cols=129  Identities=12%  Similarity=0.107  Sum_probs=96.5

Q ss_pred             eEEEEEcCCccHHHHHHHHHHcCCCCcEEEeCCCChhHHHHHHHhccEEEEcCCCccccHHHHHHHHhCCcEEEeCCCCc
Q 027511            5 VRFIVGGDGPKRVRLEEMREKHSLQDRVEMLGAVPHAQVRSVLISGHIFLNSSLTEAFCIAILEAASCGLLTVSTRVGGV   84 (222)
Q Consensus         5 ~~lvi~G~g~~~~~l~~~~~~~~l~~~V~~~g~v~~~~~~~ll~~adv~v~~s~~E~~g~~ilEAma~G~PvVa~~~gg~   84 (222)
                      ..++++|+|+. +.+.+..+ +++.  |.+.|++  +++.++|+.||+++.++.    +++++|||++|+|+|++..++.
T Consensus       214 ~~~~~~G~g~~-~~~~~~~~-~~~~--v~~~g~~--~~~~~~~~~~d~~i~~~g----~~~~~Ea~~~g~Pvv~~~~~~~  283 (357)
T PRK00726        214 QVIHQTGKGDL-EEVRAAYA-AGIN--AEVVPFI--DDMAAAYAAADLVICRAG----ASTVAELAAAGLPAILVPLPHA  283 (357)
T ss_pred             EEEEEcCCCcH-HHHHHHhh-cCCc--EEEeehH--hhHHHHHHhCCEEEECCC----HHHHHHHHHhCCCEEEecCCCC
Confidence            45778899875 44444445 6663  9999997  789999999999998662    6899999999999999876532


Q ss_pred             --------cccccCCceEE-eCC-C--HHHHHHHHHHHHhcCC--CCCHHHHHHHHHhcCCHHHHHHHHHHHHH
Q 027511           85 --------PEVLPDDMVVL-AEP-D--PGDMVLAIRKAISLLP--KIDPQVMHERMKKLYNWHDVAKRTEIVYD  144 (222)
Q Consensus        85 --------~e~i~~~~~g~-~~~-~--~~~la~~i~~ll~~~~--~~~~~~~~~~~~~~fs~~~~~~~~~~~~~  144 (222)
                              .+.+.++..|+ +.+ |  +++++++|.++++++.  +.++.++++. .+.++.+.+++.+.++.+
T Consensus       284 ~~~~~~~~~~~i~~~~~g~~~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~  356 (357)
T PRK00726        284 ADDHQTANARALVDAGAALLIPQSDLTPEKLAEKLLELLSDPERLEAMAEAARAL-GKPDAAERLADLIEELAR  356 (357)
T ss_pred             CcCcHHHHHHHHHHCCCEEEEEcccCCHHHHHHHHHHHHcCHHHHHHHHHHHHhc-CCcCHHHHHHHHHHHHhh
Confidence                    24555555554 333 4  8999999999999876  4556666555 467888888888777653

>TIGR02398 gluc_glyc_Psyn glucosylglycerol-phosphate synthase

Probab=99.34  E-value=2.6e-11  Score=108.19  Aligned_cols=135  Identities=15%  Similarity=0.172  Sum_probs=102.5

Q ss_pred             ceEEEEEcCCc---------cHHHHHHHHHHc-------CCCCcEEEeCCCChhHHHHHHHhccEEEEcCCCccccHHHH
Q 027511            4 KVRFIVGGDGP---------KRVRLEEMREKH-------SLQDRVEMLGAVPHAQVRSVLISGHIFLNSSLTEAFCIAIL   67 (222)
Q Consensus         4 ~~~lvi~G~g~---------~~~~l~~~~~~~-------~l~~~V~~~g~v~~~~~~~ll~~adv~v~~s~~E~~g~~il   67 (222)
                      +++|+++|.+.         .+.++++++.+.       +..+.+.+.+.++.+++..+|+.||+++.||..|+++++..
T Consensus       320 kv~Lvqi~~psr~~v~~y~~l~~~v~~~v~~IN~~fg~~~~~pv~~~~~~v~~~el~alYr~ADV~lvT~lrDGmNLVa~  399 (487)
T TIGR02398       320 KVTLVTACVPAASGMTIYDELQGQIEQAVGRINGRFARIGWTPLQFFTRSLPYEEVSAWFAMADVMWITPLRDGLNLVAK  399 (487)
T ss_pred             ceEEEEEeCCCcccchHHHHHHHHHHHHHHHHhhccCCCCCccEEEEcCCCCHHHHHHHHHhCCEEEECccccccCcchh
Confidence            47899998652         234555555553       44566788999999999999999999999999999999999


Q ss_pred             HHHHhCC----cEEEeCCCCccccccCCceEEeCC-CHHHHHHHHHHHHhcCC---CCCHHHHHHHHHhcCCHHHHHHHH
Q 027511           68 EAASCGL----LTVSTRVGGVPEVLPDDMVVLAEP-DPGDMVLAIRKAISLLP---KIDPQVMHERMKKLYNWHDVAKRT  139 (222)
Q Consensus        68 EAma~G~----PvVa~~~gg~~e~i~~~~~g~~~~-~~~~la~~i~~ll~~~~---~~~~~~~~~~~~~~fs~~~~~~~~  139 (222)
                      |+++|+.    |+|.|..+|..+.+. +. .++.| |+++++++|.++++.+.   +......++.+ ..++....++.+
T Consensus       400 Eyva~~~~~~GvLILSefaGaa~~l~-~A-llVNP~d~~~~A~ai~~AL~m~~~Er~~R~~~l~~~v-~~~d~~~W~~~f  476 (487)
T TIGR02398       400 EYVAAQGLLDGVLVLSEFAGAAVELK-GA-LLTNPYDPVRMDETIYVALAMPKAEQQARMREMFDAV-NYYDVQRWADEF  476 (487)
T ss_pred             hHHhhhcCCCCCEEEeccccchhhcC-CC-EEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHH-hhCCHHHHHHHH
Confidence            9999998    999999999998884 33 45555 99999999999999876   22233333333 335665555555


Q ss_pred             HH
Q 027511          140 EI  141 (222)
Q Consensus       140 ~~  141 (222)
                      .+
T Consensus       477 l~  478 (487)
T TIGR02398       477 LA  478 (487)
T ss_pred             HH
Confidence            44

Glucosylglycerol-phosphate synthase catalyzes the key step in the biosynthesis of the osmolyte glucosylglycerol. It is known in several cyanobacteria and in Pseudomonas anguilliseptica. The enzyme is closely related to the alpha,alpha-trehalose-phosphate synthase, likewise involved in osmolyte biosynthesis, of E. coli and many other bacteria. A close homolog from Xanthomonas campestris is excluded from this model and scores between trusted and noise.

>KOG2941 consensus Beta-1,4-mannosyltransferase [Posttranslational modification, protein turnover, chaperones]

Probab=99.30  E-value=2.2e-11  Score=101.96  Aligned_cols=113  Identities=13%  Similarity=0.162  Sum_probs=101.7

Q ss_pred             CCceEEEEEcCCccHHHHHHHHHHcCCCCcEEEeCCCChhHHHHHHHhccEEEE--cCC-CccccHHHHHHHHhCCcEEE
Q 027511            2 RVKVRFIVGGDGPKRVRLEEMREKHSLQDRVEMLGAVPHAQVRSVLISGHIFLN--SSL-TEAFCIAILEAASCGLLTVS   78 (222)
Q Consensus         2 ~p~~~lvi~G~g~~~~~l~~~~~~~~l~~~V~~~g~v~~~~~~~ll~~adv~v~--~s~-~E~~g~~ilEAma~G~PvVa   78 (222)
                      .|++-++|.|.||.++.+.+.++++.++..-....+++.+|++.++.+||+.|+  +|. .=-.||+++...-||+||+|
T Consensus       291 lP~llciITGKGPlkE~Y~~~I~~~~~~~v~~~tpWL~aEDYP~ll~saDlGVcLHtSSSGLDLPMKVVDMFGcglPvcA  370 (444)
T KOG2941|consen  291 LPSLLCIITGKGPLKEKYSQEIHEKNLQHVQVCTPWLEAEDYPKLLASADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCA  370 (444)
T ss_pred             CCcEEEEEcCCCchhHHHHHHHHHhcccceeeeecccccccchhHhhccccceEeeecCcccCcchhHHHhhcCCCceee
Confidence            588889999999999999999999999753344899999999999999999875  443 34579999999999999999


Q ss_pred             eCCCCccccccCCceEEeCCCHHHHHHHHHHHHhcC
Q 027511           79 TRVGGVPEVLPDDMVVLAEPDPGDMVLAIRKAISLL  114 (222)
Q Consensus        79 ~~~gg~~e~i~~~~~g~~~~~~~~la~~i~~ll~~~  114 (222)
                      -+...+.|++.++.+|++..|.+++++.+..+.++-
T Consensus       371 ~~fkcl~ELVkh~eNGlvF~Ds~eLa~ql~~lf~~f  406 (444)
T KOG2941|consen  371 VNFKCLDELVKHGENGLVFEDSEELAEQLQMLFKNF  406 (444)
T ss_pred             ecchhHHHHHhcCCCceEeccHHHHHHHHHHHHhcC
Confidence            999999999999999999999999999999999963

>TIGR01133 murG undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase

Probab=99.28  E-value=1e-11  Score=106.35  Aligned_cols=113  Identities=10%  Similarity=0.140  Sum_probs=81.4

Q ss_pred             ceEEE-EEcCCccHHHHHHHHHHcCCCCcEEEeCCCChhHHHHHHHhccEEEEcCCCccccHHHHHHHHhCCcEEEeCCC
Q 027511            4 KVRFI-VGGDGPKRVRLEEMREKHSLQDRVEMLGAVPHAQVRSVLISGHIFLNSSLTEAFCIAILEAASCGLLTVSTRVG   82 (222)
Q Consensus         4 ~~~lv-i~G~g~~~~~l~~~~~~~~l~~~V~~~g~v~~~~~~~ll~~adv~v~~s~~E~~g~~ilEAma~G~PvVa~~~g   82 (222)
                      +++++ ++|++ ..+.+++.++++++.+.+.|.   .+ ++..+|+.||++|.++    .+++++|||++|+|+|+++.+
T Consensus       209 ~~~~~~~~g~~-~~~~l~~~~~~~~l~~~v~~~---~~-~~~~~l~~ad~~v~~~----g~~~l~Ea~~~g~Pvv~~~~~  279 (348)
T TIGR01133       209 GIQIVHQTGKN-DLEKVKNVYQELGIEAIVTFI---DE-NMAAAYAAADLVISRA----GASTVAELAAAGVPAILIPYP  279 (348)
T ss_pred             CcEEEEECCcc-hHHHHHHHHhhCCceEEecCc---cc-CHHHHHHhCCEEEECC----ChhHHHHHHHcCCCEEEeeCC
Confidence            35554 44555 447888888888876555555   23 8999999999999764    278999999999999998875


Q ss_pred             C-------ccccccCCceEEeCC--C--HHHHHHHHHHHHhcCC--CCCHHHHHHH
Q 027511           83 G-------VPEVLPDDMVVLAEP--D--PGDMVLAIRKAISLLP--KIDPQVMHER  125 (222)
Q Consensus        83 g-------~~e~i~~~~~g~~~~--~--~~~la~~i~~ll~~~~--~~~~~~~~~~  125 (222)
                      +       ..+++.++.+|+..+  |  +++++++|.+++++++  +.++.++++.
T Consensus       280 ~~~~~~~~~~~~i~~~~~G~~~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~~~~~~  335 (348)
T TIGR01133       280 YAADDQYYNAKFLEDLGAGLVIRQKELLPEKLLEALLKLLLDPANLEAMAEAARKL  335 (348)
T ss_pred             CCccchhhHHHHHHHCCCEEEEecccCCHHHHHHHHHHHHcCHHHHHHHHHHHHhc
Confidence            4       234677776665433  4  9999999999998865  3444444433

RL J Bacteriol 1993 Mar;175(6):1841-3

>PRK00025 lpxB lipid-A-disaccharide synthase; Reviewed

Probab=99.24  E-value=6.2e-11  Score=102.96  Aligned_cols=103  Identities=20%  Similarity=0.222  Sum_probs=81.0

Q ss_pred             CCceEEEEEcC-CccHHHHHHHHHHc-CCCCcEEEeCCCChhHHHHHHHhccEEEEcCCCccccHHHHHHHHhCCcEEEe
Q 027511            2 RVKVRFIVGGD-GPKRVRLEEMREKH-SLQDRVEMLGAVPHAQVRSVLISGHIFLNSSLTEAFCIAILEAASCGLLTVST   79 (222)
Q Consensus         2 ~p~~~lvi~G~-g~~~~~l~~~~~~~-~l~~~V~~~g~v~~~~~~~ll~~adv~v~~s~~E~~g~~ilEAma~G~PvVa~   79 (222)
                      +|+++++++|+ +..+++++++++++ ++.  +.+..    +++..+|+.||++|.+|     |.+.+|||++|+|+|+.
T Consensus       218 ~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~--v~~~~----~~~~~~~~~aDl~v~~s-----G~~~lEa~a~G~PvI~~  286 (380)
T PRK00025        218 YPDLRFVLPLVNPKRREQIEEALAEYAGLE--VTLLD----GQKREAMAAADAALAAS-----GTVTLELALLKVPMVVG  286 (380)
T ss_pred             CCCeEEEEecCChhhHHHHHHHHhhcCCCC--eEEEc----ccHHHHHHhCCEEEECc-----cHHHHHHHHhCCCEEEE
Confidence            57899999976 66667788888776 553  55533    47999999999999987     78888999999999976


Q ss_pred             -----------------CCCCccccccCCce--EEeC--CCHHHHHHHHHHHHhcCC
Q 027511           80 -----------------RVGGVPEVLPDDMV--VLAE--PDPGDMVLAIRKAISLLP  115 (222)
Q Consensus        80 -----------------~~gg~~e~i~~~~~--g~~~--~~~~~la~~i~~ll~~~~  115 (222)
                                       +.+++++++.++..  ++..  .|++++++.+.+++++++
T Consensus       287 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~i~~ll~~~~  343 (380)
T PRK00025        287 YKVSPLTFWIAKRLVKVPYVSLPNLLAGRELVPELLQEEATPEKLARALLPLLADGA  343 (380)
T ss_pred             EccCHHHHHHHHHHHcCCeeehHHHhcCCCcchhhcCCCCCHHHHHHHHHHHhcCHH
Confidence                             45667777777643  2433  378999999999999876

>cd03786 GT1_UDP-GlcNAc_2-Epimerase Bacterial members of the UDP-N-Acetylglucosamine (GlcNAc) 2-Epimerase family are known to catalyze the reversible interconversion of UDP-GlcNAc and UDP-N-acetylmannosamine (UDP-ManNAc)

Probab=99.22  E-value=1.6e-10  Score=99.56  Aligned_cols=107  Identities=21%  Similarity=0.166  Sum_probs=89.3

Q ss_pred             ceEEEEEcCCccHHHHHHHHHHcCC-CCcEEEeCCCChhHHHHHHHhccEEEEcCCCccccHHHHHHHHhCCcEEEeCC-
Q 027511            4 KVRFIVGGDGPKRVRLEEMREKHSL-QDRVEMLGAVPHAQVRSVLISGHIFLNSSLTEAFCIAILEAASCGLLTVSTRV-   81 (222)
Q Consensus         4 ~~~lvi~G~g~~~~~l~~~~~~~~l-~~~V~~~g~v~~~~~~~ll~~adv~v~~s~~E~~g~~ilEAma~G~PvVa~~~-   81 (222)
                      ++.+++.|+++.+..+++.++++++ .++|.|+|....+++..+|+.||++|.+|.    | ...|||++|+|+|+++. 
T Consensus       231 ~~~vi~~~~~~~~~~l~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~ad~~v~~Sg----g-i~~Ea~~~g~PvI~~~~~  305 (363)
T cd03786         231 DVPVVFPNHPRTRPRIREAGLEFLGHHPNVLLISPLGYLYFLLLLKNADLVLTDSG----G-IQEEASFLGVPVLNLRDR  305 (363)
T ss_pred             CCEEEEECCCChHHHHHHHHHhhccCCCCEEEECCcCHHHHHHHHHcCcEEEEcCc----c-HHhhhhhcCCCEEeeCCC
Confidence            4677777888878899998888876 678999998888999999999999999985    4 47899999999999874 


Q ss_pred             CCccccccCCceEEeCCCHHHHHHHHHHHHhcCC
Q 027511           82 GGVPEVLPDDMVVLAEPDPGDMVLAIRKAISLLP  115 (222)
Q Consensus        82 gg~~e~i~~~~~g~~~~~~~~la~~i~~ll~~~~  115 (222)
                      +..++.+..+.+.....|+++++++|.++++++.
T Consensus       306 ~~~~~~~~~g~~~~~~~~~~~i~~~i~~ll~~~~  339 (363)
T cd03786         306 TERPETVESGTNVLVGTDPEAILAAIEKLLSDEF  339 (363)
T ss_pred             CccchhhheeeEEecCCCHHHHHHHHHHHhcCch
Confidence            5566777777665555579999999999998865

The enzyme serves to produce an activated form of ManNAc residues (UDP-ManNAc) for use in the biosynthesis of a variety of cell surface polysaccharides; The mammalian enzyme is bifunctional, catalyzing both the inversion of stereochemistry at C-2 and the hydrolysis of the UDP-sugar linkage to generate free ManNAc. It also catalyzes the phosphorylation of ManNAc to generate ManNAc 6-phosphate, a precursor to salic acids. In mammals, sialic acids are found at the termini of oligosaccharides in a large variety of cell surface glycoconjugates and are key mediators of cell-cell recognition events. Mutations in human members of this family have been associated with Sialuria, a rare disease caused by the disorders of sialic acid metabolism. This family belongs to the GT-B st

>TIGR02919 accessory Sec system glycosyltransferase GtfB

Probab=99.20  E-value=2e-10  Score=101.70  Aligned_cols=109  Identities=10%  Similarity=0.174  Sum_probs=89.5

Q ss_pred             CCCceEEEEEcCCcc-HHHHHHHHHHcCCCCcEEEeCCCChhHHHHHHHhccEEEEcCCCccccHHHHHHHHhCCcEEEe
Q 027511            1 MRVKVRFIVGGDGPK-RVRLEEMREKHSLQDRVEMLGAVPHAQVRSVLISGHIFLNSSLTEAFCIAILEAASCGLLTVST   79 (222)
Q Consensus         1 ~~p~~~lvi~G~g~~-~~~l~~~~~~~~l~~~V~~~g~v~~~~~~~ll~~adv~v~~s~~E~~g~~ilEAma~G~PvVa~   79 (222)
                      +.|+++|.| |.+.. ...|.++ +++   ++|+..+.+...++.+++..||+++.+|..|++++++.||++.|+|+++.
T Consensus       303 ~lPd~~f~I-ga~te~s~kL~~L-~~y---~nvvly~~~~~~~l~~ly~~~dlyLdin~~e~~~~al~eA~~~G~pI~af  377 (438)
T TIGR02919       303 ALPDYHFHI-AALTEMSSKLMSL-DKY---DNVKLYPNITTQKIQELYQTCDIYLDINHGNEILNAVRRAFEYNLLILGF  377 (438)
T ss_pred             hCCCcEEEE-EecCcccHHHHHH-Hhc---CCcEEECCcChHHHHHHHHhccEEEEccccccHHHHHHHHHHcCCcEEEE
Confidence            369999999 65544 6788888 766   34555555545689999999999999999999999999999999999998


Q ss_pred             CCC-CccccccCCceEEeCCCHHHHHHHHHHHHhcCC
Q 027511           80 RVG-GVPEVLPDDMVVLAEPDPGDMVLAIRKAISLLP  115 (222)
Q Consensus        80 ~~g-g~~e~i~~~~~g~~~~~~~~la~~i~~ll~~~~  115 (222)
                      +.. |..+++.+ +..+...++++++++|.+++.++.
T Consensus       378 d~t~~~~~~i~~-g~l~~~~~~~~m~~~i~~lL~d~~  413 (438)
T TIGR02919       378 EETAHNRDFIAS-ENIFEHNEVDQLISKLKDLLNDPN  413 (438)
T ss_pred             ecccCCcccccC-CceecCCCHHHHHHHHHHHhcCHH
Confidence            874 56677777 344666799999999999998875

Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus.

>PLN03064 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional

Probab=99.13  E-value=9.4e-10  Score=104.46  Aligned_cols=144  Identities=11%  Similarity=0.150  Sum_probs=103.3

Q ss_pred             CCceE--EEEE-------cCCccHHHHHHHHHH--------cCCCC--cEEE-eCCCChhHHHHHHHhccEEEEcCCCcc
Q 027511            2 RVKVR--FIVG-------GDGPKRVRLEEMREK--------HSLQD--RVEM-LGAVPHAQVRSVLISGHIFLNSSLTEA   61 (222)
Q Consensus         2 ~p~~~--lvi~-------G~g~~~~~l~~~~~~--------~~l~~--~V~~-~g~v~~~~~~~ll~~adv~v~~s~~E~   61 (222)
                      +|+++  ++++       |+++.++.++..+.+        ++..+  -|.+ ...++.+++..+|+.||++|.||..|+
T Consensus       392 ~Pe~r~kVVLvQIa~psr~~v~eY~~l~~~V~~~V~rIN~~fg~~~w~Pv~~~~~~l~~eeL~AlY~~ADV~lvTslrDG  471 (934)
T PLN03064        392 NPEWRDKVVLLQIAVPTRTDVPEYQKLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFHALCALYAVTDVALVTSLRDG  471 (934)
T ss_pred             CccccCCEEEEEEcCCCCCCcHHHHHHHHHHHHHHHHHhhhccCCCcceEEEeccCCCHHHHHHHHHhCCEEEeCccccc
Confidence            56654  5555       566666665544432        22211  1443 556899999999999999999999999


Q ss_pred             ccHHHHHHHHhCC----cEEEeCCCCccccccCCceEEeCC-CHHHHHHHHHHHHhcCC---CCCHHHHHHHHHhcCCHH
Q 027511           62 FCIAILEAASCGL----LTVSTRVGGVPEVLPDDMVVLAEP-DPGDMVLAIRKAISLLP---KIDPQVMHERMKKLYNWH  133 (222)
Q Consensus        62 ~g~~ilEAma~G~----PvVa~~~gg~~e~i~~~~~g~~~~-~~~~la~~i~~ll~~~~---~~~~~~~~~~~~~~fs~~  133 (222)
                      +++++.|+|+|+.    ++|.+..+|..+.+..+.. ++.| |+++++++|.+++..+.   .......++.+ ..+++.
T Consensus       472 mNLva~Eyva~~~~~~GvLILSEfaGaa~~L~~~Al-lVNP~D~~~vA~AI~~AL~M~~~Er~~r~~~~~~~V-~~~d~~  549 (934)
T PLN03064        472 MNLVSYEFVACQDSKKGVLILSEFAGAAQSLGAGAI-LVNPWNITEVAASIAQALNMPEEEREKRHRHNFMHV-TTHTAQ  549 (934)
T ss_pred             cCchHHHHHHhhcCCCCCeEEeCCCchHHHhCCceE-EECCCCHHHHHHHHHHHHhCCHHHHHHHHHHHHhhc-ccCCHH
Confidence            9999999999944    4444888888888844443 4555 99999999999999655   33444555555 558999


Q ss_pred             HHHHHHHHHHHHHh
Q 027511          134 DVAKRTEIVYDRAL  147 (222)
Q Consensus       134 ~~~~~~~~~~~~~~  147 (222)
                      ..++.+.+-+..+.
T Consensus       550 ~Wa~~fl~~L~~~~  563 (934)
T PLN03064        550 EWAETFVSELNDTV  563 (934)
T ss_pred             HHHHHHHHHHHHHH
Confidence            99998777666654

>TIGR02094 more_P_ylases alpha-glucan phosphorylases

Probab=98.99  E-value=7.4e-09  Score=95.00  Aligned_cols=140  Identities=18%  Similarity=0.167  Sum_probs=107.7

Q ss_pred             CceEEEEEcCCcc--------HHHHHHHHHHcCCCCcEEEeCCCChhHHHHHHHhccEEEE-cCC-CccccHHHHHHHHh
Q 027511            3 VKVRFIVGGDGPK--------RVRLEEMREKHSLQDRVEMLGAVPHAQVRSVLISGHIFLN-SSL-TEAFCIAILEAASC   72 (222)
Q Consensus         3 p~~~lvi~G~g~~--------~~~l~~~~~~~~l~~~V~~~g~v~~~~~~~ll~~adv~v~-~s~-~E~~g~~ilEAma~   72 (222)
                      .+++|+++|.|..        ...+.+++++...+++|.|+...+.+--..++..+|++++ ||. +|++|++=+=||..
T Consensus       423 ~pvq~V~~Gka~p~d~~gk~~i~~i~~la~~~~~~~kv~f~~~Yd~~lA~~i~aG~Dv~L~~Psr~~EacGtsqMka~~n  502 (601)
T TIGR02094       423 RPVQIVFAGKAHPADGEGKEIIQRIVEFSKRPEFRGRIVFLENYDINLARYLVSGVDVWLNNPRRPLEASGTSGMKAAMN  502 (601)
T ss_pred             CCeEEEEEEecCcccchHHHHHHHHHHHHhcccCCCCEEEEcCCCHHHHHHHhhhheeEEeCCCCCcCCchHHHHHHHHc
Confidence            3689999998863        3455555655446779999888877777888999999999 999 99999999999999


Q ss_pred             CCcEEEeCCCCccccccCCceEEeC--------------CCHHHHHHHHHHHH-hcC----CC----CCHHHHHHHHHh-
Q 027511           73 GLLTVSTRVGGVPEVLPDDMVVLAE--------------PDPGDMVLAIRKAI-SLL----PK----IDPQVMHERMKK-  128 (222)
Q Consensus        73 G~PvVa~~~gg~~e~i~~~~~g~~~--------------~~~~~la~~i~~ll-~~~----~~----~~~~~~~~~~~~-  128 (222)
                      |.+.+++.-|...|.. ++.+||..              .|.+++.++|++.+ ...    ..    ......++.+.. 
T Consensus       503 GgL~~sv~DG~~~E~~-~~~nGf~f~~~~~~~~~~~~d~~da~~l~~~L~~ai~~~yy~~~~~~~p~~W~~~~k~am~~~  581 (601)
T TIGR02094       503 GVLNLSILDGWWGEGY-DGDNGWAIGDGEEYDDEEEQDRLDAEALYDLLENEVIPLYYDRDEKGIPADWVEMMKESIATI  581 (601)
T ss_pred             CCceeecccCcccccC-CCCcEEEECCCccccccccccCCCHHHHHHHHHHHHHHHHhcCCcccCcHHHHHHHHHHHhcc
Confidence            9999999999888887 45566532              47789999998877 321    11    123333444444 


Q ss_pred             --cCCHHHHHHHHHHHH
Q 027511          129 --LYNWHDVAKRTEIVY  143 (222)
Q Consensus       129 --~fs~~~~~~~~~~~~  143 (222)
                        .|||++++++|.+.|
T Consensus       582 ~~~fsw~r~a~~Y~~~y  598 (601)
T TIGR02094       582 APRFSTNRMVREYVDKF  598 (601)
T ss_pred             CCCCCHHHHHHHHHHHh
Confidence              799999999999987

This family consists of known phosphorylases, and homologs believed to share the function of using inorganic phosphate to cleave an alpha 1,4 linkage between the terminal glucose residue and the rest of the polymer (maltodextrin, glycogen, etc.). The name of the glucose storage polymer substrate, and therefore the name of this enzyme, depends on the chain lengths and branching patterns. A number of the members of this family have been shown to operate on small maltodextrins, as may be obtained by utilization of exogenous sources. This family represents a distinct clade from the related family modeled by TIGR02093/PF00343.

>PF05693 Glycogen_syn: Glycogen synthase; InterPro: IPR008631 This family consists of the eukaryotic glycogen synthase proteins GYS1, GYS2 and GYS3

Probab=98.81  E-value=9.9e-09  Score=92.38  Aligned_cols=137  Identities=20%  Similarity=0.225  Sum_probs=87.3

Q ss_pred             HHHHHHHHHHcCCC----Cc--EEEeCCC-C------hhHHHHHHHhccEEEEcCCCccccHHHHHHHHhCCcEEEeCCC
Q 027511           16 RVRLEEMREKHSLQ----DR--VEMLGAV-P------HAQVRSVLISGHIFLNSSLTEAFCIAILEAASCGLLTVSTRVG   82 (222)
Q Consensus        16 ~~~l~~~~~~~~l~----~~--V~~~g~v-~------~~~~~~ll~~adv~v~~s~~E~~g~~ilEAma~G~PvVa~~~g   82 (222)
                      .+.+...+++.++.    ++  |+|++.. +      .=++.++++.+|+.|+||.+|.+|.+++|+.++|+|.|+|+..
T Consensus       423 ~DpILn~irr~~L~N~~~drVKVIF~P~yL~~~dgif~l~Y~dfv~GcdLgvFPSYYEPWGYTPlE~~a~gVPsITTnLs  502 (633)
T PF05693_consen  423 NDPILNMIRRLGLFNNPEDRVKVIFHPEYLSGTDGIFNLDYYDFVRGCDLGVFPSYYEPWGYTPLECTAFGVPSITTNLS  502 (633)
T ss_dssp             T-HHHHHHHHTT----TT-SEEEEE--S---TTSSSS-S-HHHHHHHSSEEEE--SSBSS-HHHHHHHHTT--EEEETTB
T ss_pred             cCHHHHHHHhCCCCCCCCCceEEEEeeccccCCCCCCCCCHHHHhccCceeeeccccccccCChHHHhhcCCceeeccch
Confidence            34555666666653    33  5555422 2      3568999999999999999999999999999999999999998


Q ss_pred             CccccccCC-------ceEEeCC---CHHHHHHHHH----HHHhcCC--CCCHHHHHHHHHhcCCHHHHHHHHHHHHHHH
Q 027511           83 GVPEVLPDD-------MVVLAEP---DPGDMVLAIR----KAISLLP--KIDPQVMHERMKKLYNWHDVAKRTEIVYDRA  146 (222)
Q Consensus        83 g~~e~i~~~-------~~g~~~~---~~~~la~~i~----~ll~~~~--~~~~~~~~~~~~~~fs~~~~~~~~~~~~~~~  146 (222)
                      |+.-.+.+.       +..++..   +.++.++.|.    +.....+  +...++..+++.+..+|+.+...|.+.|+.+
T Consensus       503 GFG~~~~~~~~~~~~~GV~VvdR~~~n~~e~v~~la~~l~~f~~~~~rqri~~Rn~ae~LS~~~dW~~~~~yY~~Ay~~A  582 (633)
T PF05693_consen  503 GFGCWMQEHIEDPEEYGVYVVDRRDKNYDESVNQLADFLYKFCQLSRRQRIIQRNRAERLSDLADWKNFGKYYEKAYDLA  582 (633)
T ss_dssp             HHHHHHHTTS-HHGGGTEEEE-SSSS-HHHHHHHHHHHHHHHHT--HHHHHHHHHHHHHHGGGGBHHHHCHHHHHHHHHH
T ss_pred             hHHHHHHHhhccCcCCcEEEEeCCCCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHH
Confidence            877665543       2223333   4455444444    4444433  3445566677888999999999999999998


Q ss_pred             hcCCCc
Q 027511          147 LECPNQ  152 (222)
Q Consensus       147 ~~~~~~  152 (222)
                      +....+
T Consensus       583 L~~a~p  588 (633)
T PF05693_consen  583 LRRAYP  588 (633)
T ss_dssp             HHHHSH
T ss_pred             HHhcCc
Confidence            875443

Glycogen synthase (GS) is the enzyme responsible for the synthesis of -1,4-linked glucose chains in glycogen. It is the rate limiting enzyme in the synthesis of the polysaccharide, and its activity is highly regulated through phosphorylation at multiple sites and also by allosteric effectors, mainly glucose 6-phosphate (G6P) [].; GO: 0004373 glycogen (starch) synthase activity, 0005978 glycogen biosynthetic process; PDB: 3NB0_C 3RT1_C 3RSZ_D 3O3C_B 3NAZ_B 3NCH_D.

>TIGR00215 lpxB lipid-A-disaccharide synthase

Probab=98.75  E-value=1.3e-07  Score=82.75  Aligned_cols=104  Identities=16%  Similarity=0.228  Sum_probs=71.6

Q ss_pred             CCceEEEEE-cCCccHHHHHHHHHHcCCCCcEEEeCCCChhHHHHHHHhccEEEEcCCCccccHHHHHHHHhCCcEEEeC
Q 027511            2 RVKVRFIVG-GDGPKRVRLEEMREKHSLQDRVEMLGAVPHAQVRSVLISGHIFLNSSLTEAFCIAILEAASCGLLTVSTR   80 (222)
Q Consensus         2 ~p~~~lvi~-G~g~~~~~l~~~~~~~~l~~~V~~~g~v~~~~~~~ll~~adv~v~~s~~E~~g~~ilEAma~G~PvVa~~   80 (222)
                      +|++++++. +++.....++++.++++...+|.+.+.    +...+|+.||++|.+|     |.+.+|+|++|+|+|...
T Consensus       223 ~p~~~~vi~~~~~~~~~~~~~~~~~~~~~~~v~~~~~----~~~~~l~aADl~V~~S-----Gt~tlEa~a~G~P~Vv~y  293 (385)
T TIGR00215       223 EPDLRRVLPVVNFKRRLQFEQIKAEYGPDLQLHLIDG----DARKAMFAADAALLAS-----GTAALEAALIKTPMVVGY  293 (385)
T ss_pred             CCCeEEEEEeCCchhHHHHHHHHHHhCCCCcEEEECc----hHHHHHHhCCEEeecC-----CHHHHHHHHcCCCEEEEE
Confidence            578888665 455566777777777766667776653    4567999999999999     777789999999999763


Q ss_pred             -CCCcc----------------ccccCCceE--EeCC--CHHHHHHHHHHHHhcC
Q 027511           81 -VGGVP----------------EVLPDDMVV--LAEP--DPGDMVLAIRKAISLL  114 (222)
Q Consensus        81 -~gg~~----------------e~i~~~~~g--~~~~--~~~~la~~i~~ll~~~  114 (222)
                       .+.+.                .++.+....  +...  +++.+++.+.++++++
T Consensus       294 k~~pl~~~~~~~~~~~~~~~~~nil~~~~~~pel~q~~~~~~~l~~~~~~ll~~~  348 (385)
T TIGR00215       294 RMKPLTFLIARRLVKTDYISLPNILANRLLVPELLQEECTPHPLAIALLLLLENG  348 (385)
T ss_pred             cCCHHHHHHHHHHHcCCeeeccHHhcCCccchhhcCCCCCHHHHHHHHHHHhcCC
Confidence             22221                222222211  2212  6788999999998876

Lipid-A precursor biosynthesis producing lipid A disaccharide in a condensation reaction. transcribed as part of an operon including lpxA

>cd04299 GT1_Glycogen_Phosphorylase_like This family is most closely related to the oligosaccharide phosphorylase domain family and other unidentified sequences

Probab=98.57  E-value=7.7e-07  Score=83.67  Aligned_cols=140  Identities=16%  Similarity=0.127  Sum_probs=105.6

Q ss_pred             ceEEEEEcCCccH--------HHHHHHHHHcCCCCcEEEeCCCChhHHHHHHHhccEEEEcCC--CccccHHHHHHHHhC
Q 027511            4 KVRFIVGGDGPKR--------VRLEEMREKHSLQDRVEMLGAVPHAQVRSVLISGHIFLNSSL--TEAFCIAILEAASCG   73 (222)
Q Consensus         4 ~~~lvi~G~g~~~--------~~l~~~~~~~~l~~~V~~~g~v~~~~~~~ll~~adv~v~~s~--~E~~g~~ilEAma~G   73 (222)
                      .++|+++|.+...        +.+.+++++....++|.|+...+-+--..++..+|++++||+  .|++|++=+=||.-|
T Consensus       513 pvQ~IfaGKAhP~d~~gK~iIk~i~~~a~~p~~~~kVvfle~Yd~~lA~~LvaG~DvwLn~prrp~EAsGTSgMKA~~NG  592 (778)
T cd04299         513 PVQFIFAGKAHPADEPGKELIQEIVEFSRRPEFRGRIVFLEDYDMALARHLVQGVDVWLNTPRRPLEASGTSGMKAALNG  592 (778)
T ss_pred             CeEEEEEEecCccchHHHHHHHHHHHHHhCcCCCCcEEEEcCCCHHHHHHHHhhhhhcccCCCCCCCCCccchHHHHHcC
Confidence            5899999976422        234444554456679999888877777888999999999999  999999999999999


Q ss_pred             CcEEEeCCCCccccccCCceEEeCC--------------CHHHHHHHHHHHHh----cC------C--CCCHHHHHHHHH
Q 027511           74 LLTVSTRVGGVPEVLPDDMVVLAEP--------------DPGDMVLAIRKAIS----LL------P--KIDPQVMHERMK  127 (222)
Q Consensus        74 ~PvVa~~~gg~~e~i~~~~~g~~~~--------------~~~~la~~i~~ll~----~~------~--~~~~~~~~~~~~  127 (222)
                      .+-+++--|...|-. ++.+||.-+              +.++|.+.|++.+-    +.      .  ..++.++...+.
T Consensus       593 ~LnlSvlDGww~E~~-~g~nGwaig~~~~~~~~~~~d~~da~~Ly~~Le~~i~p~yy~r~~~g~p~~W~~~~k~sm~~~~  671 (778)
T cd04299         593 GLNLSVLDGWWDEGY-DGENGWAIGDGDEYEDDEYQDAEEAEALYDLLENEVIPLFYDRDEGGYPPGWVAMMKHSMATLG  671 (778)
T ss_pred             CeeeecccCcccccc-CCCCceEeCCCccccChhhcchhhHHHHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHhcc
Confidence            999999999999987 677776443              34667777765444    21      1  234444444555


Q ss_pred             hcCCHHHHHHHHHHHHH
Q 027511          128 KLYNWHDVAKRTEIVYD  144 (222)
Q Consensus       128 ~~fs~~~~~~~~~~~~~  144 (222)
                      ..|||++|+++|.+-|.
T Consensus       672 p~fs~~Rmv~eY~~~~Y  688 (778)
T cd04299         672 PRFSAERMVREYVERFY  688 (778)
T ss_pred             cCCCHHHHHHHHHHHhH
Confidence            59999999999987654

Oligosaccharide phosphorylase catalyzes the breakdown of oligosaccharides into glucose-1-phosphate units. They are important allosteric enzymes in carbohydrate metabolism. The members of this family are found in bacteria and Archaea.

>PF13844 Glyco_transf_41: Glycosyl transferase family 41; PDB: 3PE4_C 3PE3_D 3TAX_C 2XGO_A 2JLB_B 2XGM_A 2VSY_B 2XGS_B 2VSN_A

Probab=98.56  E-value=5e-07  Score=80.19  Aligned_cols=144  Identities=14%  Similarity=0.088  Sum_probs=94.9

Q ss_pred             CCceEEEEEcCC-ccHHHHHHHHHHcCCC-CcEEEeCCCChhHHHHHHHhccEEEEcCCCccccHHHHHHHHhCCcEEEe
Q 027511            2 RVKVRFIVGGDG-PKRVRLEEMREKHSLQ-DRVEMLGAVPHAQVRSVLISGHIFLNSSLTEAFCIAILEAASCGLLTVST   79 (222)
Q Consensus         2 ~p~~~lvi~G~g-~~~~~l~~~~~~~~l~-~~V~~~g~v~~~~~~~ll~~adv~v~~s~~E~~g~~ilEAma~G~PvVa~   79 (222)
                      .|+.+|++.... .....+++.++++|+. +|+.|.+..+.++....++.+|+++-|.-+ +-+.+.+||+++|+|||+-
T Consensus       312 vP~S~L~L~~~~~~~~~~l~~~~~~~Gv~~~Ri~f~~~~~~~ehl~~~~~~DI~LDT~p~-nG~TTt~dALwmGVPvVTl  390 (468)
T PF13844_consen  312 VPNSRLWLLRFPASGEARLRRRFAAHGVDPDRIIFSPVAPREEHLRRYQLADICLDTFPY-NGGTTTLDALWMGVPVVTL  390 (468)
T ss_dssp             STTEEEEEEETSTTHHHHHHHHHHHTTS-GGGEEEEE---HHHHHHHGGG-SEEE--SSS---SHHHHHHHHHT--EEB-
T ss_pred             CCCcEEEEeeCCHHHHHHHHHHHHHcCCChhhEEEcCCCCHHHHHHHhhhCCEEeeCCCC-CCcHHHHHHHHcCCCEEec
Confidence            588999887533 3456788888889885 789999999999998999999999988543 3478899999999999987


Q ss_pred             CCCCccccccC------CceEEeCCCHHHHHHHHHHHHhcCC--CCCHHHHHHHHH--hcCCHHHHHHHHHHHHHHH
Q 027511           80 RVGGVPEVLPD------DMVVLAEPDPGDMVLAIRKAISLLP--KIDPQVMHERMK--KLYNWHDVAKRTEIVYDRA  146 (222)
Q Consensus        80 ~~gg~~e~i~~------~~~g~~~~~~~~la~~i~~ll~~~~--~~~~~~~~~~~~--~~fs~~~~~~~~~~~~~~~  146 (222)
                      ....+..=+..      |..-++..|.++.++.-.++..+++  +...++.+++..  .-|+-..+++.+++.|+.+
T Consensus       391 ~G~~~~sR~~aSiL~~lGl~ElIA~s~~eYv~~Av~La~D~~~l~~lR~~Lr~~~~~SpLfd~~~~ar~lE~a~~~m  467 (468)
T PF13844_consen  391 PGETMASRVGASILRALGLPELIADSEEEYVEIAVRLATDPERLRALRAKLRDRRSKSPLFDPKRFARNLEAAYRQM  467 (468)
T ss_dssp             --SSGGGSHHHHHHHHHT-GGGB-SSHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHSGGG-HHHHHHHHHHHHHHH
T ss_pred             cCCCchhHHHHHHHHHcCCchhcCCCHHHHHHHHHHHhCCHHHHHHHHHHHHHHHhhCCCCCHHHHHHHHHHHHHHh
Confidence            65443332211      1223677889999999999999877  444444444443  3599999999999999875

>PF00982 Glyco_transf_20: Glycosyltransferase family 20; InterPro: IPR001830 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases

Probab=98.33  E-value=1.6e-05  Score=71.34  Aligned_cols=110  Identities=15%  Similarity=0.173  Sum_probs=70.6

Q ss_pred             EEEeCCCChhHHHHHHHhccEEEEcCCCccccHHHHHHHHhCCc----EEEeCCCCccccccCCceEEeCCCHHHHHHHH
Q 027511           32 VEMLGAVPHAQVRSVLISGHIFLNSSLTEAFCIAILEAASCGLL----TVSTRVGGVPEVLPDDMVVLAEPDPGDMVLAI  107 (222)
Q Consensus        32 V~~~g~v~~~~~~~ll~~adv~v~~s~~E~~g~~ilEAma~G~P----vVa~~~gg~~e~i~~~~~g~~~~~~~~la~~i  107 (222)
                      +.+.+.++.+++..+|+.||+++.||.-+|..++..|+.+|..+    +|.|...|..+.+.++...+-+-|++++|++|
T Consensus       355 ~~~~~~~~~~~~~aly~~aDv~lvTslrDGmNLva~Eyva~q~~~~GvLiLSefaGaa~~L~~~al~VNP~d~~~~A~ai  434 (474)
T PF00982_consen  355 IYIYRSLSFEELLALYRAADVALVTSLRDGMNLVAKEYVACQDDNPGVLILSEFAGAAEQLSEAALLVNPWDIEEVADAI  434 (474)
T ss_dssp             EEE-S---HHHHHHHHHH-SEEEE--SSBS--HHHHHHHHHS-TS--EEEEETTBGGGGT-TTS-EEE-TT-HHHHHHHH
T ss_pred             EEEecCCCHHHHHHHHHhhhhEEecchhhccCCcceEEEEEecCCCCceEeeccCCHHHHcCCccEEECCCChHHHHHHH
Confidence            34466799999999999999999999999999999999999876    77888888899988887656555999999999


Q ss_pred             HHHHhcCC---CCCHHHHHHHHHhcCCHHHHHHHHHHH
Q 027511          108 RKAISLLP---KIDPQVMHERMKKLYNWHDVAKRTEIV  142 (222)
Q Consensus       108 ~~ll~~~~---~~~~~~~~~~~~~~fs~~~~~~~~~~~  142 (222)
                      .++++.+.   +......++.+ ..++....++.+.+-
T Consensus       435 ~~AL~M~~~Er~~r~~~~~~~v-~~~~~~~W~~~~l~~  471 (474)
T PF00982_consen  435 HEALTMPPEERKERHARLREYV-REHDVQWWAESFLRD  471 (474)
T ss_dssp             HHHHT--HHHHHHHHHHHHHHH-HHT-HHHHHHHHHHH
T ss_pred             HHHHcCCHHHHHHHHHHHHHHh-HhCCHHHHHHHHHHH
Confidence            99999865   12222333333 335655555555443

These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 20 GT20 from CAZY comprises enzymes with only one known activity; alpha, alpha-trehalose-phosphate synthase [UDP-forming] (2.4.1.15 from EC). Synthesis of trehalose in the yeast Saccharomyces cerevisiae is catalysed by the trehalose-6-phosphate (Tre6P) synthase/phosphatase complex, which is composed of at least three different subunits encoded by the genes TPS1, TPS2, and TSL1. Tps1 and Tps2 carry the catalytic activities of trehalose synthesis, namely Tre6P synthase (Tps1) and Tre6P phosphatase (Tps2), while TsI1 has regulatory functions. There is some evidence that TsI1 and Tps3 may share a common function with respect to regulation and/or structural stabilisation of the Tre6P synthase/phosphatase complex in exponentially growing, heat-shocked cells []. OtsA (trehalose-6-phosphate synthase) from Escherichia coli has homology to the full-length TPS1, the N-terminal part of TPS2 and an internal region of TPS3 (TSL1) of yeast [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1UQU_A 2WTX_A 1UQT_B 1GZ5_B.

>TIGR03568 NeuC_NnaA UDP-N-acetyl-D-glucosamine 2-epimerase, UDP-hydrolysing

Probab=98.11  E-value=3.5e-05  Score=67.08  Aligned_cols=77  Identities=22%  Similarity=0.316  Sum_probs=62.8

Q ss_pred             CCcEEEeCCCChhHHHHHHHhccEEEEcCCCccccHHHHHHHHhCCcEEEeCCCCccccccCCceEE-eCCCHHHHHHHH
Q 027511           29 QDRVEMLGAVPHAQVRSVLISGHIFLNSSLTEAFCIAILEAASCGLLTVSTRVGGVPEVLPDDMVVL-AEPDPGDMVLAI  107 (222)
Q Consensus        29 ~~~V~~~g~v~~~~~~~ll~~adv~v~~s~~E~~g~~ilEAma~G~PvVa~~~gg~~e~i~~~~~g~-~~~~~~~la~~i  107 (222)
                      .++|.+.+.++..++..+++.|+++|--|    .|. +.||+++|+|||+  .|.-+|.+..+.+.+ +..|++++.+++
T Consensus       261 ~~~v~l~~~l~~~~~l~Ll~~a~~vitdS----Sgg-i~EA~~lg~Pvv~--l~~R~e~~~~g~nvl~vg~~~~~I~~a~  333 (365)
T TIGR03568       261 HPNFRLFKSLGQERYLSLLKNADAVIGNS----SSG-IIEAPSFGVPTIN--IGTRQKGRLRADSVIDVDPDKEEIVKAI  333 (365)
T ss_pred             CCCEEEECCCChHHHHHHHHhCCEEEEcC----hhH-HHhhhhcCCCEEe--ecCCchhhhhcCeEEEeCCCHHHHHHHH
Confidence            36799999999999999999999999333    233 3899999999994  467888888787766 655999999999


Q ss_pred             HHHHh
Q 027511          108 RKAIS  112 (222)
Q Consensus       108 ~~ll~  112 (222)
                      .++++
T Consensus       334 ~~~~~  338 (365)
T TIGR03568       334 EKLLD  338 (365)
T ss_pred             HHHhC
Confidence            98543

This family of enzymes catalyzes the combined epimerization and UDP-hydrolysis of UDP-N-acetylglucosamine to N-acetylmannosamine. This is in contrast to the related enzyme WecB (TIGR00236) which retains the UDP moiety. NeuC acts in concert with NeuA and NeuB to synthesize CMP-N5-acetyl-neuraminate.

>COG3914 Spy Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational modification, protein turnover, chaperones]

Probab=98.10  E-value=3.6e-05  Score=69.01  Aligned_cols=146  Identities=13%  Similarity=0.144  Sum_probs=99.4

Q ss_pred             CCceEEEEEcCCccH---HHHHHHHHHcCC-CCcEEEeCCCChhHHHHHHHhccEEEEcCCCccccHHHHHHHHhCCcEE
Q 027511            2 RVKVRFIVGGDGPKR---VRLEEMREKHSL-QDRVEMLGAVPHAQVRSVLISGHIFLNSSLTEAFCIAILEAASCGLLTV   77 (222)
Q Consensus         2 ~p~~~lvi~G~g~~~---~~l~~~~~~~~l-~~~V~~~g~v~~~~~~~ll~~adv~v~~s~~E~~g~~ilEAma~G~PvV   77 (222)
                      -|+-.|++.|.|++.   ..+++++++.|+ .+|++|++..++++...-|.-||+++-|.=+-+ ..+.+||+.+|+|||
T Consensus       457 vP~Svl~L~~~~~~~~~~~~l~~la~~~Gv~~eRL~f~p~~~~~~h~a~~~iADlvLDTyPY~g-~TTa~daLwm~vPVl  535 (620)
T COG3914         457 VPNSVLLLKAGGDDAEINARLRDLAEREGVDSERLRFLPPAPNEDHRARYGIADLVLDTYPYGG-HTTASDALWMGVPVL  535 (620)
T ss_pred             CCCcEEEEecCCCcHHHHHHHHHHHHHcCCChhheeecCCCCCHHHHHhhchhheeeecccCCC-ccchHHHHHhcCcee
Confidence            478888888876554   678888999988 469999999999999999999999997655433 568899999999999


Q ss_pred             EeCCCCccc-----ccc-CCceEEeCCCHHHHHHHHHHHHhcCC--CCCHHHHHHHHHh--cCCHHHHHHHHHHHHHHHh
Q 027511           78 STRVGGVPE-----VLP-DDMVVLAEPDPGDMVLAIRKAISLLP--KIDPQVMHERMKK--LYNWHDVAKRTEIVYDRAL  147 (222)
Q Consensus        78 a~~~gg~~e-----~i~-~~~~g~~~~~~~~la~~i~~ll~~~~--~~~~~~~~~~~~~--~fs~~~~~~~~~~~~~~~~  147 (222)
                      +--...+..     ++. -|..-++..+.++.++.-..+-++..  .....+-.....+  -|+.+.++++++++|..+.
T Consensus       536 T~~G~~FasR~~~si~~~agi~e~vA~s~~dYV~~av~~g~dral~q~~r~~l~~~r~tspL~d~~~far~le~~y~~M~  615 (620)
T COG3914         536 TRVGEQFASRNGASIATNAGIPELVADSRADYVEKAVAFGSDRALRQQVRAELKRSRQTSPLFDPKAFARKLETLYWGMW  615 (620)
T ss_pred             eeccHHHHHhhhHHHHHhcCCchhhcCCHHHHHHHHHHhcccHHHHHhhHHHHHhccccCcccCHHHHHHHHHHHHHHHH
Confidence            643322111     111 11222445566666665555555542  1222222222222  6999999999999999876


Q ss_pred             c
Q 027511          148 E  148 (222)
Q Consensus       148 ~  148 (222)
                      +
T Consensus       616 ~  616 (620)
T COG3914         616 S  616 (620)
T ss_pred             H
Confidence            5

>TIGR01426 MGT glycosyltransferase, MGT family

Probab=98.07  E-value=2.6e-05  Score=68.21  Aligned_cols=108  Identities=17%  Similarity=0.116  Sum_probs=70.3

Q ss_pred             CCCcEEEeCCCChhHHHHHHHhccEEEEcCCCccccHHHHHHHHhCCcEEEeCCCCcc----ccccCCceE-EeCC---C
Q 027511           28 LQDRVEMLGAVPHAQVRSVLISGHIFLNSSLTEAFCIAILEAASCGLLTVSTRVGGVP----EVLPDDMVV-LAEP---D   99 (222)
Q Consensus        28 l~~~V~~~g~v~~~~~~~ll~~adv~v~~s~~E~~g~~ilEAma~G~PvVa~~~gg~~----e~i~~~~~g-~~~~---~   99 (222)
                      ++++|.+.+++++.   .+|..+|++|..+-    ..++.||+++|+|+|.....+-.    ..+.+.+.+ ....   +
T Consensus       273 ~~~~v~~~~~~p~~---~ll~~~~~~I~hgG----~~t~~Eal~~G~P~v~~p~~~dq~~~a~~l~~~g~g~~l~~~~~~  345 (392)
T TIGR01426       273 LPPNVEVRQWVPQL---EILKKADAFITHGG----MNSTMEALFNGVPMVAVPQGADQPMTARRIAELGLGRHLPPEEVT  345 (392)
T ss_pred             CCCCeEEeCCCCHH---HHHhhCCEEEECCC----chHHHHHHHhCCCEEecCCcccHHHHHHHHHHCCCEEEeccccCC
Confidence            45789999999764   67899999995443    35789999999999986554322    223332333 2222   6


Q ss_pred             HHHHHHHHHHHHhcCC-CCCHHHHHHHHHhcCCHHHHHHHHHHH
Q 027511          100 PGDMVLAIRKAISLLP-KIDPQVMHERMKKLYNWHDVAKRTEIV  142 (222)
Q Consensus       100 ~~~la~~i~~ll~~~~-~~~~~~~~~~~~~~fs~~~~~~~~~~~  142 (222)
                      +++++++|.+++++++ +......++.+...-..+..++.++++
T Consensus       346 ~~~l~~ai~~~l~~~~~~~~~~~l~~~~~~~~~~~~aa~~i~~~  389 (392)
T TIGR01426       346 AEKLREAVLAVLSDPRYAERLRKMRAEIREAGGARRAADEIEGF  389 (392)
T ss_pred             HHHHHHHHHHHhcCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHh
Confidence            7899999999998765 333344444555555555555555443

This model describes the MGT (macroside glycosyltransferase) subfamily of the UDP-glucuronosyltransferase family. Members include a number of glucosyl transferases for macrolide antibiotic inactivation, but also include transferases of glucose-related sugars for macrolide antibiotic production.

>COG1519 KdtA 3-deoxy-D-manno-octulosonic-acid transferase [Cell envelope biogenesis, outer membrane]

Probab=98.05  E-value=2e-05  Score=68.53  Aligned_cols=126  Identities=16%  Similarity=0.109  Sum_probs=93.7

Q ss_pred             CCCceEEEEEcCCccH-HHHHHHHHHcCCC-------------CcEEEeCCCChhHHHHHHHhccE-EEEcCCCccccHH
Q 027511            1 MRVKVRFIVGGDGPKR-VRLEEMREKHSLQ-------------DRVEMLGAVPHAQVRSVLISGHI-FLNSSLTEAFCIA   65 (222)
Q Consensus         1 ~~p~~~lvi~G~g~~~-~~l~~~~~~~~l~-------------~~V~~~g~v~~~~~~~ll~~adv-~v~~s~~E~~g~~   65 (222)
                      ++||..++++=.-|.+ +.+++++++.|+.             .+|.+...+  -++..+|.-+|+ ||--|..+.-|--
T Consensus       257 ~~~~~llIlVPRHpERf~~v~~l~~~~gl~~~~rS~~~~~~~~tdV~l~Dtm--GEL~l~y~~adiAFVGGSlv~~GGHN  334 (419)
T COG1519         257 QFPNLLLILVPRHPERFKAVENLLKRKGLSVTRRSQGDPPFSDTDVLLGDTM--GELGLLYGIADIAFVGGSLVPIGGHN  334 (419)
T ss_pred             hCCCceEEEecCChhhHHHHHHHHHHcCCeEEeecCCCCCCCCCcEEEEecH--hHHHHHHhhccEEEECCcccCCCCCC
Confidence            4688999999988777 6888888888762             245555554  789999999999 6777888888899


Q ss_pred             HHHHHHhCCcEEEe----CCCCccccccCCceEEeCCCHHHHHHHHHHHHhcCC--CCCHHHHHHHHHh
Q 027511           66 ILEAASCGLLTVST----RVGGVPEVLPDDMVVLAEPDPGDMVLAIRKAISLLP--KIDPQVMHERMKK  128 (222)
Q Consensus        66 ilEAma~G~PvVa~----~~gg~~e~i~~~~~g~~~~~~~~la~~i~~ll~~~~--~~~~~~~~~~~~~  128 (222)
                      ++|++++|+|||.-    |...+.+-+...+.++...|.+.++.++..+..++.  ..++.++...+.+
T Consensus       335 ~LEpa~~~~pvi~Gp~~~Nf~ei~~~l~~~ga~~~v~~~~~l~~~v~~l~~~~~~r~~~~~~~~~~v~~  403 (419)
T COG1519         335 PLEPAAFGTPVIFGPYTFNFSDIAERLLQAGAGLQVEDADLLAKAVELLLADEDKREAYGRAGLEFLAQ  403 (419)
T ss_pred             hhhHHHcCCCEEeCCccccHHHHHHHHHhcCCeEEECCHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHH
Confidence            99999999999953    334444445555666777778888888888887744  4455555555544

>PRK10117 trehalose-6-phosphate synthase; Provisional

Probab=98.05  E-value=8.8e-05  Score=66.29  Aligned_cols=114  Identities=10%  Similarity=0.100  Sum_probs=88.7

Q ss_pred             EEE-eCCCChhHHHHHHHhccEEEEcCCCccccHHHHHHHHhCC-----cEEEeCCCCccccccCCceEEeCC-CHHHHH
Q 027511           32 VEM-LGAVPHAQVRSVLISGHIFLNSSLTEAFCIAILEAASCGL-----LTVSTRVGGVPEVLPDDMVVLAEP-DPGDMV  104 (222)
Q Consensus        32 V~~-~g~v~~~~~~~ll~~adv~v~~s~~E~~g~~ilEAma~G~-----PvVa~~~gg~~e~i~~~~~g~~~~-~~~~la  104 (222)
                      |.+ ...++.+++..+|+.||+.+.||.-+|..++..|+.+|-.     ++|-|...|..+.+. + ..++.| |.++++
T Consensus       333 v~y~~~~~~~~~l~alyr~ADv~lVTplRDGMNLVAkEyva~q~~~~~GvLILSefAGaA~~L~-~-AllVNP~d~~~~A  410 (474)
T PRK10117        333 LYYLNQHFDRKLLMKIFRYSDVGLVTPLRDGMNLVAKEYVAAQDPANPGVLVLSQFAGAANELT-S-ALIVNPYDRDEVA  410 (474)
T ss_pred             EEEecCCCCHHHHHHHHHhccEEEecccccccccccchheeeecCCCCccEEEecccchHHHhC-C-CeEECCCCHHHHH
Confidence            444 5678999999999999999999999999999999999965     377888888887774 3 445656 999999


Q ss_pred             HHHHHHHhcCC---CCCHHHHHHHHHhcCCHHHHHHHHHHHHHHHhc
Q 027511          105 LAIRKAISLLP---KIDPQVMHERMKKLYNWHDVAKRTEIVYDRALE  148 (222)
Q Consensus       105 ~~i~~ll~~~~---~~~~~~~~~~~~~~fs~~~~~~~~~~~~~~~~~  148 (222)
                      ++|.+++..+.   +......++.+ ..++....++.+.+-+..+..
T Consensus       411 ~Ai~~AL~Mp~~Er~~R~~~l~~~v-~~~dv~~W~~~fL~~L~~~~~  456 (474)
T PRK10117        411 AALDRALTMPLAERISRHAEMLDVI-VKNDINHWQECFISDLKQIVP  456 (474)
T ss_pred             HHHHHHHcCCHHHHHHHHHHHHHHh-hhCCHHHHHHHHHHHHHHhhh
Confidence            99999999876   22333344444 447888888877777766543

>COG4641 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=97.87  E-value=2.4e-05  Score=66.95  Aligned_cols=118  Identities=13%  Similarity=0.099  Sum_probs=101.1

Q ss_pred             cEEEeCCCCh-hHHHHHHHhccEEEEcCC---Ccc---ccHHHHHHHHhCCcEEEeCCCCccccccCCceEEeCCCHHHH
Q 027511           31 RVEMLGAVPH-AQVRSVLISGHIFLNSSL---TEA---FCIAILEAASCGLLTVSTRVGGVPEVLPDDMVVLAEPDPGDM  103 (222)
Q Consensus        31 ~V~~~g~v~~-~~~~~ll~~adv~v~~s~---~E~---~g~~ilEAma~G~PvVa~~~gg~~e~i~~~~~g~~~~~~~~l  103 (222)
                      ++...|+++. ..+...++..+++++-++   .++   +.+.+.|+|+||.|.++....++..++.++...+...|..++
T Consensus       238 ~~~yIg~~~~~~~v~~~~~~~~~~~n~~r~~~~~~l~~~~~RvFeiagc~~~liT~~~~~~e~~f~pgk~~iv~~d~kdl  317 (373)
T COG4641         238 NVQYIGYYNPKDGVPNAFKRDDVTLNINRASIANALFSPTNRVFEIAGCGGFLITDYWKDLEKFFKPGKDIIVYQDSKDL  317 (373)
T ss_pred             hhhhhhccCccchhhhcccccceeeeecHHHHHhhcCCchhhHHHHhhcCCccccccHHHHHHhcCCchheEEecCHHHH
Confidence            5667777766 778888888899887655   222   489999999999999999999999999999998999999999


Q ss_pred             HHHHHHHHhcCC--CCCHHHHHHHHHhcCCHHHHHHHHHHHHHHHhc
Q 027511          104 VLAIRKAISLLP--KIDPQVMHERMKKLYNWHDVAKRTEIVYDRALE  148 (222)
Q Consensus       104 a~~i~~ll~~~~--~~~~~~~~~~~~~~fs~~~~~~~~~~~~~~~~~  148 (222)
                      .+.+..++..+.  +++.+.+.+++...|+.+.-...+.+...++..
T Consensus       318 ~~~~~yll~h~~erkeiae~~ye~V~~~ht~~~r~~~~~~~i~sI~~  364 (373)
T COG4641         318 KEKLKYLLNHPDERKEIAECAYERVLARHTYEERIFKLLNEIASINI  364 (373)
T ss_pred             HHHHHHHhcCcchHHHHHHhhHHHHHHhccHHHHHHHHHHHHHHHHH
Confidence            999999999985  778899999999999999988888888877543

>TIGR03492 conserved hypothetical protein

Probab=97.82  E-value=0.00022  Score=62.72  Aligned_cols=106  Identities=15%  Similarity=0.114  Sum_probs=71.5

Q ss_pred             CceEEEEEc-CCccHHHHHHHHHHcCCC--------------CcEEEeCCCChhHHHHHHHhccEEEEcCCCccccHHHH
Q 027511            3 VKVRFIVGG-DGPKRVRLEEMREKHSLQ--------------DRVEMLGAVPHAQVRSVLISGHIFLNSSLTEAFCIAIL   67 (222)
Q Consensus         3 p~~~lvi~G-~g~~~~~l~~~~~~~~l~--------------~~V~~~g~v~~~~~~~ll~~adv~v~~s~~E~~g~~il   67 (222)
                      |+++|++.- ++...+.+++..++.+..              +++.+..+  ..++..+|+.||++|..|-     .+-.
T Consensus       237 ~~~~~v~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~v~~~--~~~~~~~l~~ADlvI~rSG-----t~T~  309 (396)
T TIGR03492       237 QPFVFLAAIVPSLSLEKLQAILEDLGWQLEGSSEDQTSLFQKGTLEVLLG--RGAFAEILHWADLGIAMAG-----TATE  309 (396)
T ss_pred             CCeEEEEEeCCCCCHHHHHHHHHhcCceecCCccccchhhccCceEEEec--hHhHHHHHHhCCEEEECcC-----HHHH
Confidence            567776543 455667777776655543              23555555  3678999999999998753     4559


Q ss_pred             HHHHhCCcEEEeCCCCcc---ccccC-----Cc-eEEeCCCHHHHHHHHHHHHhcCC
Q 027511           68 EAASCGLLTVSTRVGGVP---EVLPD-----DM-VVLAEPDPGDMVLAIRKAISLLP  115 (222)
Q Consensus        68 EAma~G~PvVa~~~gg~~---e~i~~-----~~-~g~~~~~~~~la~~i~~ll~~~~  115 (222)
                      |++++|+|+|.....+..   .+...     +. ..+...+++.+++++.+++++++
T Consensus       310 E~a~lg~P~Ilip~~~~q~na~~~~~~~~l~g~~~~l~~~~~~~l~~~l~~ll~d~~  366 (396)
T TIGR03492       310 QAVGLGKPVIQLPGKGPQFTYGFAEAQSRLLGGSVFLASKNPEQAAQVVRQLLADPE  366 (396)
T ss_pred             HHHHhCCCEEEEeCCCCHHHHHHHHhhHhhcCCEEecCCCCHHHHHHHHHHHHcCHH
Confidence            999999999987743321   12222     22 23445578999999999998754

This protein family is restricted to the Cyanobacteria, in one or two copies, save for instances in the genus Deinococcus. This protein shows some sequence similarity, especially toward the C-terminus, to lipid-A-disaccharide synthase (TIGR00215 or pfam02684). The function is unknown.

>cd03784 GT1_Gtf_like This family includes the Gtfs, a group of homologous glycosyltransferases involved in the final stages of the biosynthesis of antibiotics vancomycin and related chloroeremomycin

Probab=97.67  E-value=0.00015  Score=63.40  Aligned_cols=78  Identities=17%  Similarity=0.161  Sum_probs=56.4

Q ss_pred             CCcEEEeCCCChhHHHHHHHhccEEEEcCCCccccHHHHHHHHhCCcEEEeCCCC----ccccccCCceEEe-CC---CH
Q 027511           29 QDRVEMLGAVPHAQVRSVLISGHIFLNSSLTEAFCIAILEAASCGLLTVSTRVGG----VPEVLPDDMVVLA-EP---DP  100 (222)
Q Consensus        29 ~~~V~~~g~v~~~~~~~ll~~adv~v~~s~~E~~g~~ilEAma~G~PvVa~~~gg----~~e~i~~~~~g~~-~~---~~  100 (222)
                      +++|.+.+++++.   .+|..||++|    +.+-..++.||+++|+|+|.....+    ..+.+...+.|.. ..   ++
T Consensus       287 ~~~v~~~~~~p~~---~ll~~~d~~I----~hgG~~t~~eal~~GvP~v~~P~~~dQ~~~a~~~~~~G~g~~l~~~~~~~  359 (401)
T cd03784         287 PDNVRVVDFVPHD---WLLPRCAAVV----HHGGAGTTAAALRAGVPQLVVPFFGDQPFWAARVAELGAGPALDPRELTA  359 (401)
T ss_pred             CCceEEeCCCCHH---HHhhhhheee----ecCCchhHHHHHHcCCCEEeeCCCCCcHHHHHHHHHCCCCCCCCcccCCH
Confidence            4689999998754   5688899999    4444689999999999999876654    2223333333332 22   67


Q ss_pred             HHHHHHHHHHHhc
Q 027511          101 GDMVLAIRKAISL  113 (222)
Q Consensus       101 ~~la~~i~~ll~~  113 (222)
                      +++.+++.+++++
T Consensus       360 ~~l~~al~~~l~~  372 (401)
T cd03784         360 ERLAAALRRLLDP  372 (401)
T ss_pred             HHHHHHHHHHhCH
Confidence            9999999999875

Gtfs transfer sugar moieties from an activated NDP-sugar donor to the oxidatively cross-linked heptapeptide core of vancomycin group antibiotics. The core structure is important for the bioactivity of the antibiotics.

>PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming]

Probab=97.66  E-value=0.00066  Score=65.13  Aligned_cols=112  Identities=9%  Similarity=0.073  Sum_probs=83.1

Q ss_pred             EEE-eCCCChhHHHHHHHhccEEEEcCCCccccHHHHHHHHhCC-------------------cEEEeCCCCccccccCC
Q 027511           32 VEM-LGAVPHAQVRSVLISGHIFLNSSLTEAFCIAILEAASCGL-------------------LTVSTRVGGVPEVLPDD   91 (222)
Q Consensus        32 V~~-~g~v~~~~~~~ll~~adv~v~~s~~E~~g~~ilEAma~G~-------------------PvVa~~~gg~~e~i~~~   91 (222)
                      |.+ ...++.+++..+|+.||+++.|+.-++..++..|+.+|..                   .+|.|...|....+. +
T Consensus       417 v~~~~~~~~~~e~~aly~~ADv~lVT~lRDGMNLva~Eyia~~~~~~~~~~~~~~~~~~~~~gvLiLSEfaGaa~~L~-~  495 (854)
T PLN02205        417 IVLIDAPLKFYERVAYYVVAECCLVTAVRDGMNLIPYEYIISRQGNEKLDKLLGLEPSTPKKSMLVVSEFIGCSPSLS-G  495 (854)
T ss_pred             EEEEecCCCHHHHHHHHHhccEEEeccccccccccchheeEEccCccccccccccccccCCCCceEeeeccchhHHhC-c
Confidence            555 4778999999999999999999999999999999999854                   255666655555553 4


Q ss_pred             ceEEeCC-CHHHHHHHHHHHHhcCC---CCCHHHHHHHHHhcCCHHHHHHHHHHHHHHH
Q 027511           92 MVVLAEP-DPGDMVLAIRKAISLLP---KIDPQVMHERMKKLYNWHDVAKRTEIVYDRA  146 (222)
Q Consensus        92 ~~g~~~~-~~~~la~~i~~ll~~~~---~~~~~~~~~~~~~~fs~~~~~~~~~~~~~~~  146 (222)
                      . ..+.| |.++++++|.+++..+.   +....+.++.+ ..++....++.+..-++.+
T Consensus       496 A-i~VNP~d~~~~a~ai~~AL~m~~~Er~~R~~~~~~~v-~~~d~~~W~~~fl~~l~~~  552 (854)
T PLN02205        496 A-IRVNPWNIDAVADAMDSALEMAEPEKQLRHEKHYRYV-STHDVGYWARSFLQDLERT  552 (854)
T ss_pred             C-eEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHH-hhCCHHHHHHHHHHHHHHH
Confidence            3 35555 99999999999999876   22333444444 4467777777766655554

>PF02350 Epimerase_2: UDP-N-acetylglucosamine 2-epimerase; InterPro: IPR003331 UDP-N-acetylglucosamine 2-epimerase 5

Probab=97.62  E-value=0.00079  Score=58.25  Aligned_cols=102  Identities=25%  Similarity=0.224  Sum_probs=69.8

Q ss_pred             CceEEEEEcC--CccHHHHHHHHHHcCCCCcEEEeCCCChhHHHHHHHhccEEEEcCCCccccHHHH-HHHHhCCcEEEe
Q 027511            3 VKVRFIVGGD--GPKRVRLEEMREKHSLQDRVEMLGAVPHAQVRSVLISGHIFLNSSLTEAFCIAIL-EAASCGLLTVST   79 (222)
Q Consensus         3 p~~~lvi~G~--g~~~~~l~~~~~~~~l~~~V~~~g~v~~~~~~~ll~~adv~v~~s~~E~~g~~il-EAma~G~PvVa~   79 (222)
                      +++.+++...  -.....+.+..+++   +++.+...++..++..+++.|+++|-    .. | .+. ||.++|+|||.-
T Consensus       213 ~~~~vi~~~hn~p~~~~~i~~~l~~~---~~v~~~~~l~~~~~l~ll~~a~~vvg----dS-s-GI~eEa~~lg~P~v~i  283 (346)
T PF02350_consen  213 QNVPVIFPLHNNPRGSDIIIEKLKKY---DNVRLIEPLGYEEYLSLLKNADLVVG----DS-S-GIQEEAPSLGKPVVNI  283 (346)
T ss_dssp             TTEEEEEE--S-HHHHHHHHHHHTT----TTEEEE----HHHHHHHHHHESEEEE----SS-H-HHHHHGGGGT--EEEC
T ss_pred             CCCcEEEEecCCchHHHHHHHHhccc---CCEEEECCCCHHHHHHHHhcceEEEE----cC-c-cHHHHHHHhCCeEEEe
Confidence            4566777764  22334555555544   38999999999999999999999973    22 3 556 999999999987


Q ss_pred             -CCCCccccccCCceEEeCCCHHHHHHHHHHHHhc
Q 027511           80 -RVGGVPEVLPDDMVVLAEPDPGDMVLAIRKAISL  113 (222)
Q Consensus        80 -~~gg~~e~i~~~~~g~~~~~~~~la~~i~~ll~~  113 (222)
                       +.|.-++....+.+.++..|++++.+++.+++.+
T Consensus       284 R~~geRqe~r~~~~nvlv~~~~~~I~~ai~~~l~~  318 (346)
T PF02350_consen  284 RDSGERQEGRERGSNVLVGTDPEAIIQAIEKALSD  318 (346)
T ss_dssp             SSS-S-HHHHHTTSEEEETSSHHHHHHHHHHHHH-
T ss_pred             cCCCCCHHHHhhcceEEeCCCHHHHHHHHHHHHhC
Confidence             5677778888887777777999999999999976

1.3.14 from EC catalyses the production of UDP-ManNAc from UDP-GlcNAc. Some of the enzymes is this family are bifunctional. In microorganisms the epimerase is involved in in the synthesis of the capsule precursor UDP-ManNAcA [, ]. The protein from rat liver displays both epimerase and kinase activity [].; GO: 0008761 UDP-N-acetylglucosamine 2-epimerase activity, 0006047 UDP-N-acetylglucosamine metabolic process, 0009103 lipopolysaccharide biosynthetic process; PDB: 1V4V_B 3BEO_B 3DZC_B 3OT5_B 1O6C_B 1VGV_D 1F6D_C.

>KOG3742 consensus Glycogen synthase [Carbohydrate transport and metabolism]

Probab=97.61  E-value=4.1e-05  Score=66.83  Aligned_cols=117  Identities=15%  Similarity=0.185  Sum_probs=84.5

Q ss_pred             hHHHHHHHhccEEEEcCCCccccHHHHHHHHhCCcEEEeCCCCcccc----ccCC---ceEE-----eCC--CHHHHHHH
Q 027511           41 AQVRSVLISGHIFLNSSLTEAFCIAILEAASCGLLTVSTRVGGVPEV----LPDD---MVVL-----AEP--DPGDMVLA  106 (222)
Q Consensus        41 ~~~~~ll~~adv~v~~s~~E~~g~~ilEAma~G~PvVa~~~gg~~e~----i~~~---~~g~-----~~~--~~~~la~~  106 (222)
                      =|+.+..+.|++.|+||.+|.+|.++.|.-.+|+|-|+||.+|+.-+    +.+.   +..+     ..+  +.+++++-
T Consensus       492 lDYeeFVRGCHLGVFPSYYEPWGYTPAECTVMGiPSvtTNlSGFGcfMeehi~d~~ayGIYIvDRRfks~deSv~qL~~~  571 (692)
T KOG3742|consen  492 LDYEEFVRGCHLGVFPSYYEPWGYTPAECTVMGIPSVTTNLSGFGCFMEEHIEDPQAYGIYIVDRRFKSPDESVQQLASF  571 (692)
T ss_pred             CCHHHHhccccccccccccCCCCCCchheEEeccccccccccchhhhHHHHhcCchhceEEEEecccCChhhHHHHHHHH
Confidence            47889999999999999999999999999999999999999876543    4333   2222     222  45777777


Q ss_pred             HHHHHhcCC--CCCHHHHHHHHHhcCCHHHHHHHHHHHHHHHhcCCCccHHHH
Q 027511          107 IRKAISLLP--KIDPQVMHERMKKLYNWHDVAKRTEIVYDRALECPNQNLVER  157 (222)
Q Consensus       107 i~~ll~~~~--~~~~~~~~~~~~~~fs~~~~~~~~~~~~~~~~~~~~~~~~~~  157 (222)
                      |.......+  +...++.-++...-.+|..+..-|.+.-.-++++.-+.....
T Consensus       572 m~~F~~qsRRQRIiqRNrtErLSdLLDWk~lG~~Y~~aR~laL~r~~Pd~f~~  624 (692)
T KOG3742|consen  572 MYEFCKQSRRQRIIQRNRTERLSDLLDWKYLGRYYRKARHLALSRAYPDQFDE  624 (692)
T ss_pred             HHHHHHHHHHHHHHHhcchhhHHHHHhHHHHhHHHHHHHHHHHHhhCcHHHHH
Confidence            777776654  334445556777788898888888777666666544443333

>TIGR03590 PseG pseudaminic acid biosynthesis-associated protein PseG

Probab=97.53  E-value=0.0005  Score=57.65  Aligned_cols=63  Identities=13%  Similarity=0.213  Sum_probs=50.0

Q ss_pred             EEcCC-ccHHHHHHHHHHcCCCCcEEEeCCCChhHHHHHHHhccEEEEcCCCccccHHHHHHHHhCCcEEEeCC
Q 027511            9 VGGDG-PKRVRLEEMREKHSLQDRVEMLGAVPHAQVRSVLISGHIFLNSSLTEAFCIAILEAASCGLLTVSTRV   81 (222)
Q Consensus         9 i~G~g-~~~~~l~~~~~~~~l~~~V~~~g~v~~~~~~~ll~~adv~v~~s~~E~~g~~ilEAma~G~PvVa~~~   81 (222)
                      ++|.+ +..+++++..+..   .++.+++++  +++..+|..||++|.+     .|.++.|++++|+|+|.-..
T Consensus       205 v~G~~~~~~~~l~~~~~~~---~~i~~~~~~--~~m~~lm~~aDl~Is~-----~G~T~~E~~a~g~P~i~i~~  268 (279)
T TIGR03590       205 VTGSSNPNLDELKKFAKEY---PNIILFIDV--ENMAELMNEADLAIGA-----AGSTSWERCCLGLPSLAICL  268 (279)
T ss_pred             EECCCCcCHHHHHHHHHhC---CCEEEEeCH--HHHHHHHHHCCEEEEC-----CchHHHHHHHcCCCEEEEEe
Confidence            55654 5566777776653   478899885  7899999999999973     56899999999999997654

This protein is found in association with enzymes involved in the biosynthesis of pseudaminic acid, a component of polysaccharide in certain Pseudomonas strains as well as a modification of flagellin in Campylobacter and Hellicobacter. The role of this protein is unclear, although it may participate in N-acetylation in conjunction with, or in the absence of PseH (TIGR03585) as it often scores above the trusted cutoff to pfam00583 representing a family of acetyltransferases.

>COG0707 MurG UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase [Cell envelope biogenesis, outer membrane]

Probab=97.52  E-value=0.00075  Score=58.57  Aligned_cols=91  Identities=14%  Similarity=0.176  Sum_probs=63.7

Q ss_pred             HHHHHHHHHHcCCCCcEEEeCCCChhHHHHHHHhccEEEEcCCCccccHHHHHHHHhCCcEEEeCCCCc--------ccc
Q 027511           16 RVRLEEMREKHSLQDRVEMLGAVPHAQVRSVLISGHIFLNSSLTEAFCIAILEAASCGLLTVSTRVGGV--------PEV   87 (222)
Q Consensus        16 ~~~l~~~~~~~~l~~~V~~~g~v~~~~~~~ll~~adv~v~~s~~E~~g~~ilEAma~G~PvVa~~~gg~--------~e~   87 (222)
                      .+.+.+...+++.   +...+++  +++..+|+.||+.|    +-+-++++.|..++|+|.|--..+.-        ...
T Consensus       224 ~~~~~~~~~~~~~---~~v~~f~--~dm~~~~~~ADLvI----sRaGa~Ti~E~~a~g~P~IliP~p~~~~~~Q~~NA~~  294 (357)
T COG0707         224 LEELKSAYNELGV---VRVLPFI--DDMAALLAAADLVI----SRAGALTIAELLALGVPAILVPYPPGADGHQEYNAKF  294 (357)
T ss_pred             HHHHHHHHhhcCc---EEEeeHH--hhHHHHHHhccEEE----eCCcccHHHHHHHhCCCEEEeCCCCCccchHHHHHHH
Confidence            4455554444443   7788885  77999999999999    55568999999999999995544322        223


Q ss_pred             ccCCceEE--eCC--CHHHHHHHHHHHHhcCC
Q 027511           88 LPDDMVVL--AEP--DPGDMVLAIRKAISLLP  115 (222)
Q Consensus        88 i~~~~~g~--~~~--~~~~la~~i~~ll~~~~  115 (222)
                      +.+...+.  ..+  +++++.+.|.+++++++
T Consensus       295 l~~~gaa~~i~~~~lt~~~l~~~i~~l~~~~~  326 (357)
T COG0707         295 LEKAGAALVIRQSELTPEKLAELILRLLSNPE  326 (357)
T ss_pred             HHhCCCEEEeccccCCHHHHHHHHHHHhcCHH
Confidence            33333333  223  47899999999998855

>COG0380 OtsA Trehalose-6-phosphate synthase [Carbohydrate transport and metabolism]

Probab=97.47  E-value=0.0017  Score=58.06  Aligned_cols=109  Identities=11%  Similarity=0.163  Sum_probs=79.1

Q ss_pred             EEEeCCCChhHHHHHHHhccEEEEcCCCccccHHHHHHHHhCC----cEEEeCCCCccccccCCceEEeCC-CHHHHHHH
Q 027511           32 VEMLGAVPHAQVRSVLISGHIFLNSSLTEAFCIAILEAASCGL----LTVSTRVGGVPEVLPDDMVVLAEP-DPGDMVLA  106 (222)
Q Consensus        32 V~~~g~v~~~~~~~ll~~adv~v~~s~~E~~g~~ilEAma~G~----PvVa~~~gg~~e~i~~~~~g~~~~-~~~~la~~  106 (222)
                      ..+.-.++.+++..+++.||+++.+|.-++..++..|+.+|--    |.|-|...|....+.+  ..++.| |.++++++
T Consensus       361 ~~l~~~~~~~~l~al~~~aDv~lVtplrDGMNLvakEyVa~q~~~~G~LiLSeFaGaa~~L~~--AliVNP~d~~~va~a  438 (486)
T COG0380         361 HYLHRDLDRNELLALYRAADVMLVTPLRDGMNLVAKEYVAAQRDKPGVLILSEFAGAASELRD--ALIVNPWDTKEVADA  438 (486)
T ss_pred             EEEeccCCHHHHHHHHhhhceeeeccccccccHHHHHHHHhhcCCCCcEEEeccccchhhhcc--CEeECCCChHHHHHH
Confidence            3446678999999999999999999999999999999999843    6777777777777766  345555 99999999


Q ss_pred             HHHHHhcCC--CC-CHHHHHHHHHhcCCHHHHHHHHHHHH
Q 027511          107 IRKAISLLP--KI-DPQVMHERMKKLYNWHDVAKRTEIVY  143 (222)
Q Consensus       107 i~~ll~~~~--~~-~~~~~~~~~~~~fs~~~~~~~~~~~~  143 (222)
                      |.+++..+.  +. ......+.+ ..++....+..+.+-+
T Consensus       439 i~~AL~m~~eEr~~r~~~~~~~v-~~~d~~~W~~~fl~~l  477 (486)
T COG0380         439 IKRALTMSLEERKERHEKLLKQV-LTHDVARWANSFLDDL  477 (486)
T ss_pred             HHHHhcCCHHHHHHHHHHHHHHH-HhhhHHHHHHHHHHHH
Confidence            999999865  21 222222222 3355555555544433

>COG1819 Glycosyl transferases, related to UDP-glucuronosyltransferase [Carbohydrate transport and metabolism / Signal transduction mechanisms]

Probab=97.25  E-value=0.001  Score=58.77  Aligned_cols=108  Identities=17%  Similarity=0.101  Sum_probs=69.6

Q ss_pred             CCCCcEEEeCCCChhHHHHHHHhccEEEEcCCCccccHHHHHHHHhCCcEEEeCCCC----ccccccCCceEEe----CC
Q 027511           27 SLQDRVEMLGAVPHAQVRSVLISGHIFLNSSLTEAFCIAILEAASCGLLTVSTRVGG----VPEVLPDDMVVLA----EP   98 (222)
Q Consensus        27 ~l~~~V~~~g~v~~~~~~~ll~~adv~v~~s~~E~~g~~ilEAma~G~PvVa~~~gg----~~e~i~~~~~g~~----~~   98 (222)
                      ++++++...+++|+.+   ++.+||++|+    -+-..++.||+..|+|+|+-..+.    ..+-+.+-+.|..    .-
T Consensus       281 ~~p~n~~v~~~~p~~~---~l~~ad~vI~----hGG~gtt~eaL~~gvP~vv~P~~~DQ~~nA~rve~~G~G~~l~~~~l  353 (406)
T COG1819         281 NVPDNVIVADYVPQLE---LLPRADAVIH----HGGAGTTSEALYAGVPLVVIPDGADQPLNAERVEELGAGIALPFEEL  353 (406)
T ss_pred             cCCCceEEecCCCHHH---HhhhcCEEEe----cCCcchHHHHHHcCCCEEEecCCcchhHHHHHHHHcCCceecCcccC
Confidence            3456888888887665   8999999994    334557889999999999765542    2333444444422    23


Q ss_pred             CHHHHHHHHHHHHhcCC-CCCHHHHHHHHHhcCCHHHHHHHHHH
Q 027511           99 DPGDMVLAIRKAISLLP-KIDPQVMHERMKKLYNWHDVAKRTEI  141 (222)
Q Consensus        99 ~~~~la~~i~~ll~~~~-~~~~~~~~~~~~~~fs~~~~~~~~~~  141 (222)
                      +++.++++|++++.+.. +....+..+..++.-....+++.+++
T Consensus       354 ~~~~l~~av~~vL~~~~~~~~~~~~~~~~~~~~g~~~~a~~le~  397 (406)
T COG1819         354 TEERLRAAVNEVLADDSYRRAAERLAEEFKEEDGPAKAADLLEE  397 (406)
T ss_pred             CHHHHHHHHHHHhcCHHHHHHHHHHHHHhhhcccHHHHHHHHHH
Confidence            78999999999999865 33333344444444443334443333

>TIGR00661 MJ1255 conserved hypothetical protein

Probab=96.99  E-value=0.0058  Score=52.08  Aligned_cols=80  Identities=18%  Similarity=0.105  Sum_probs=53.3

Q ss_pred             CCcEEEeCCCChhHHHHHHHhccEEEEcCCCccccHHHHHHHHhCCcEEEeCCCCcccc------ccCCceEE-eCC-CH
Q 027511           29 QDRVEMLGAVPHAQVRSVLISGHIFLNSSLTEAFCIAILEAASCGLLTVSTRVGGVPEV------LPDDMVVL-AEP-DP  100 (222)
Q Consensus        29 ~~~V~~~g~v~~~~~~~ll~~adv~v~~s~~E~~g~~ilEAma~G~PvVa~~~gg~~e~------i~~~~~g~-~~~-~~  100 (222)
                      .+++.+.++.+ +++.++|..||++|.-+-    ..++.||+++|+|+|.....+..|.      +.+.+.+. ... +.
T Consensus       228 ~~~v~~~~~~~-~~~~~~l~~ad~vI~~~G----~~t~~Ea~~~g~P~l~ip~~~~~eQ~~na~~l~~~g~~~~l~~~~~  302 (321)
T TIGR00661       228 NENVEIRRITT-DNFKELIKNAELVITHGG----FSLISEALSLGKPLIVIPDLGQFEQGNNAVKLEDLGCGIALEYKEL  302 (321)
T ss_pred             CCCEEEEECCh-HHHHHHHHhCCEEEECCC----hHHHHHHHHcCCCEEEEcCCCcccHHHHHHHHHHCCCEEEcChhhH
Confidence            45777777765 689999999999997553    3468999999999998877654442      33333333 322 33


Q ss_pred             HHHHHHHHHHHhcC
Q 027511          101 GDMVLAIRKAISLL  114 (222)
Q Consensus       101 ~~la~~i~~ll~~~  114 (222)
                       ++.+++...+.++
T Consensus       303 -~~~~~~~~~~~~~  315 (321)
T TIGR00661       303 -RLLEAILDIRNMK  315 (321)
T ss_pred             -HHHHHHHhccccc
Confidence             5555555544443

This model represents nearly the full length of MJ1255 from Methanococcus jannaschii and of an unpublished protein from Vibrio cholerae, as well as the C-terminal half of a protein from Methanobacterium thermoautotrophicum. A small region (~50 amino acids) within the domain appears related to a family of sugar transferases.

>PF13528 Glyco_trans_1_3: Glycosyl transferase family 1

Probab=96.95  E-value=0.0045  Score=52.30  Aligned_cols=75  Identities=11%  Similarity=0.119  Sum_probs=50.5

Q ss_pred             CcEEEeCCCChhHHHHHHHhccEEEEcCCCccccHHHHHHHHhCCcEEEeCCCCcccc------ccCCceEEeCC----C
Q 027511           30 DRVEMLGAVPHAQVRSVLISGHIFLNSSLTEAFCIAILEAASCGLLTVSTRVGGVPEV------LPDDMVVLAEP----D   99 (222)
Q Consensus        30 ~~V~~~g~v~~~~~~~ll~~adv~v~~s~~E~~g~~ilEAma~G~PvVa~~~gg~~e~------i~~~~~g~~~~----~   99 (222)
                      ++|.+.++. ..++.++|..||++|..+-    -.++.||+++|+|+|.-...+..|-      +...+.+...+    +
T Consensus       232 ~ni~~~~~~-~~~~~~~m~~ad~vIs~~G----~~t~~Ea~~~g~P~l~ip~~~~~EQ~~~a~~l~~~G~~~~~~~~~~~  306 (318)
T PF13528_consen  232 GNIHVRPFS-TPDFAELMAAADLVISKGG----YTTISEALALGKPALVIPRPGQDEQEYNARKLEELGLGIVLSQEDLT  306 (318)
T ss_pred             CCEEEeecC-hHHHHHHHHhCCEEEECCC----HHHHHHHHHcCCCEEEEeCCCCchHHHHHHHHHHCCCeEEcccccCC
Confidence            355555442 3789999999999995432    3468999999999998777655443      22333343322    6


Q ss_pred             HHHHHHHHHH
Q 027511          100 PGDMVLAIRK  109 (222)
Q Consensus       100 ~~~la~~i~~  109 (222)
                      ++.+.+.|++
T Consensus       307 ~~~l~~~l~~  316 (318)
T PF13528_consen  307 PERLAEFLER  316 (318)
T ss_pred             HHHHHHHHhc
Confidence            7888887765

>PF04101 Glyco_tran_28_C: Glycosyltransferase family 28 C-terminal domain; InterPro: IPR007235 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases

Probab=96.95  E-value=7.5e-05  Score=57.49  Aligned_cols=80  Identities=20%  Similarity=0.300  Sum_probs=52.2

Q ss_pred             CcEEEeCCCChhHHHHHHHhccEEEEcCCCccccHHHHHHHHhCCcEEEeCCCCcc--c------cc-cCCceE-EeCC-
Q 027511           30 DRVEMLGAVPHAQVRSVLISGHIFLNSSLTEAFCIAILEAASCGLLTVSTRVGGVP--E------VL-PDDMVV-LAEP-   98 (222)
Q Consensus        30 ~~V~~~g~v~~~~~~~ll~~adv~v~~s~~E~~g~~ilEAma~G~PvVa~~~gg~~--e------~i-~~~~~g-~~~~-   98 (222)
                      .+|.+.+++  +++..+|+.||+.|    +-+-+.++.|++++|+|.|.-...+..  +      .+ ..+... +... 
T Consensus        55 ~~v~~~~~~--~~m~~~m~~aDlvI----s~aG~~Ti~E~l~~g~P~I~ip~~~~~~~~q~~na~~~~~~g~~~~~~~~~  128 (167)
T PF04101_consen   55 PNVKVFGFV--DNMAELMAAADLVI----SHAGAGTIAEALALGKPAIVIPLPGAADNHQEENAKELAKKGAAIMLDESE  128 (167)
T ss_dssp             CCCEEECSS--SSHHHHHHHHSEEE----ECS-CHHHHHHHHCT--EEEE--TTT-T-CHHHHHHHHHHCCCCCCSECCC
T ss_pred             CcEEEEech--hhHHHHHHHcCEEE----eCCCccHHHHHHHcCCCeeccCCCCcchHHHHHHHHHHHHcCCccccCccc
Confidence            578899996  56999999999998    445568999999999999865444311  1      12 222211 2222 


Q ss_pred             -CHHHHHHHHHHHHhcCC
Q 027511           99 -DPGDMVLAIRKAISLLP  115 (222)
Q Consensus        99 -~~~~la~~i~~ll~~~~  115 (222)
                       +++.|.++|..++.++.
T Consensus       129 ~~~~~L~~~i~~l~~~~~  146 (167)
T PF04101_consen  129 LNPEELAEAIEELLSDPE  146 (167)
T ss_dssp             -SCCCHHHHHHCHCCCHH
T ss_pred             CCHHHHHHHHHHHHcCcH
Confidence             46889999998887744

These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 28 GT28 from CAZY comprises enzymes with a number of known activities; 1,2-diacylglycerol 3-beta-galactosyltransferase (2.4.1.46 from EC); 1,2-diacylglycerol 3-beta-glucosyltransferase (2.4.1.157 from EC); beta-N-acetylglucosamine transferase (2.4.1 from EC). Structural analysis suggests the C-terminal domain contains the UDP-GlcNAc binding site.; GO: 0016758 transferase activity, transferring hexosyl groups, 0030246 carbohydrate binding, 0005975 carbohydrate metabolic process, 0030259 lipid glycosylation; PDB: 2KS6_A 2JZC_A 1NLM_B 1F0K_B.

>PHA03392 egt ecdysteroid UDP-glucosyltransferase; Provisional

Probab=96.79  E-value=0.0026  Score=57.85  Aligned_cols=82  Identities=20%  Similarity=0.107  Sum_probs=57.2

Q ss_pred             CCCCcEEEeCCCChhHHHHHH--HhccEEEEcCCCccccHHHHHHHHhCCcEEEeCCCC----ccccccCCceEE-eCC-
Q 027511           27 SLQDRVEMLGAVPHAQVRSVL--ISGHIFLNSSLTEAFCIAILEAASCGLLTVSTRVGG----VPEVLPDDMVVL-AEP-   98 (222)
Q Consensus        27 ~l~~~V~~~g~v~~~~~~~ll--~~adv~v~~s~~E~~g~~ilEAma~G~PvVa~~~gg----~~e~i~~~~~g~-~~~-   98 (222)
                      ++++||.+.+++|+.   ++|  .++++||    +-+-..++.||+.+|+|+|+-...+    ....+...+.|. ... 
T Consensus       343 ~~p~Nv~i~~w~Pq~---~lL~hp~v~~fI----tHGG~~s~~Eal~~GvP~v~iP~~~DQ~~Na~rv~~~G~G~~l~~~  415 (507)
T PHA03392        343 NLPANVLTQKWFPQR---AVLKHKNVKAFV----TQGGVQSTDEAIDALVPMVGLPMMGDQFYNTNKYVELGIGRALDTV  415 (507)
T ss_pred             cCCCceEEecCCCHH---HHhcCCCCCEEE----ecCCcccHHHHHHcCCCEEECCCCccHHHHHHHHHHcCcEEEeccC
Confidence            345788888998875   456  4578888    5555678999999999999765532    222233333333 222 


Q ss_pred             --CHHHHHHHHHHHHhcCC
Q 027511           99 --DPGDMVLAIRKAISLLP  115 (222)
Q Consensus        99 --~~~~la~~i~~ll~~~~  115 (222)
                        +.+++.++|.++++++.
T Consensus       416 ~~t~~~l~~ai~~vl~~~~  434 (507)
T PHA03392        416 TVSAAQLVLAIVDVIENPK  434 (507)
T ss_pred             CcCHHHHHHHHHHHhCCHH
Confidence              77999999999998865

>PRK02797 4-alpha-L-fucosyltransferase; Provisional

Probab=96.79  E-value=0.04  Score=46.63  Aligned_cols=136  Identities=11%  Similarity=-0.029  Sum_probs=89.4

Q ss_pred             CceEEEEE-cC--C--ccHHHHHHHHHHcCCCCcEEE-eCCCChhHHHHHHHhccEEEEcCC-CccccHHHHHHHHhCCc
Q 027511            3 VKVRFIVG-GD--G--PKRVRLEEMREKHSLQDRVEM-LGAVPHAQVRSVLISGHIFLNSSL-TEAFCIAILEAASCGLL   75 (222)
Q Consensus         3 p~~~lvi~-G~--g--~~~~~l~~~~~~~~l~~~V~~-~g~v~~~~~~~ll~~adv~v~~s~-~E~~g~~ilEAma~G~P   75 (222)
                      .++++++- |-  |  ...+++++..+++--.+++.. ...++-+|+.++++++|+.++-.. -.+.|+. .-.+..|+|
T Consensus       174 ~~v~ii~PlsYp~gn~~Yi~~V~~~~~~lF~~~~~~~L~e~l~f~eYl~lL~~~Dl~~f~~~RQQgiGnl-~lLi~~G~~  252 (322)
T PRK02797        174 DNVKIIVPMGYPANNQAYIEEVRQAGLALFGAENFQILTEKLPFDDYLALLRQCDLGYFIFARQQGIGTL-CLLIQLGKP  252 (322)
T ss_pred             CCeEEEEECCcCCCCHHHHHHHHHHHHHhcCcccEEehhhhCCHHHHHHHHHhCCEEEEeechhhHHhHH-HHHHHCCCc
Confidence            45666655 22  2  233566666666655466766 567799999999999999887654 6888854 457899999


Q ss_pred             EEEe-CCCCccccccCCceEE-eCC--CHHHHHHHHHHHHhcCCCCCHHHHHHHHHhcCCHHHHHHHHHHHHHHHhcC
Q 027511           76 TVST-RVGGVPEVLPDDMVVL-AEP--DPGDMVLAIRKAISLLPKIDPQVMHERMKKLYNWHDVAKRTEIVYDRALEC  149 (222)
Q Consensus        76 vVa~-~~gg~~e~i~~~~~g~-~~~--~~~~la~~i~~ll~~~~~~~~~~~~~~~~~~fs~~~~~~~~~~~~~~~~~~  149 (222)
                      |+-+ ++.-..++...+...+ ...  |...+.++=+++....+        +.+.  |+-+.+.+.+.++++.+..+
T Consensus       253 v~l~r~n~fwqdl~e~gv~Vlf~~d~L~~~~v~e~~rql~~~dk--------~~I~--Ff~pn~~~~W~~~l~~~~g~  320 (322)
T PRK02797        253 VVLSRDNPFWQDLTEQGLPVLFTGDDLDEDIVREAQRQLASVDK--------NIIA--FFSPNYLQGWRNALAIAAGE  320 (322)
T ss_pred             EEEecCCchHHHHHhCCCeEEecCCcccHHHHHHHHHHHHhhCc--------ceee--ecCHhHHHHHHHHHHHhhCC
Confidence            9966 5566667766675553 333  44455444333333211        1222  99999999999999877654

>COG0058 GlgP Glucan phosphorylase [Carbohydrate transport and metabolism]

Probab=96.78  E-value=0.0096  Score=55.82  Aligned_cols=98  Identities=16%  Similarity=0.147  Sum_probs=76.9

Q ss_pred             CCceEEEEEcCC-ccH---H----HHHHHHHHcCCCCcEEEeCCCChhHHHHHHHhccEEEEcCC--CccccHHHHHHHH
Q 027511            2 RVKVRFIVGGDG-PKR---V----RLEEMREKHSLQDRVEMLGAVPHAQVRSVLISGHIFLNSSL--TEAFCIAILEAAS   71 (222)
Q Consensus         2 ~p~~~lvi~G~g-~~~---~----~l~~~~~~~~l~~~V~~~g~v~~~~~~~ll~~adv~v~~s~--~E~~g~~ilEAma   71 (222)
                      .|.++++++|.. |..   +    .+...++..+...+|.|+...+-+-...++.++||-.+.|+  .|+.|+.=+=+|.
T Consensus       521 ~prv~~iFaGKAhP~y~~aK~iIk~I~~~a~~in~~lkVvFl~nYdvslA~~iipa~Dvweqis~a~~EASGTsnMK~al  600 (750)
T COG0058         521 VPRVQIIFAGKAHPADYAAKEIIKLINDVADVINNKLKVVFLPNYDVSLAELLIPAADVWEQIPTAGKEASGTSNMKAAL  600 (750)
T ss_pred             CCceEEEEeccCCCcchHHHHHHHHHHHHHHhhcccceEEEeCCCChhHHHhhcccccccccCCCCCccccCcCcchHHh
Confidence            477888899943 221   2    22333444444567999999887778889999999998887  7999999999999


Q ss_pred             hCCcEEEeCCCCcccccc--CCceEEeCCC
Q 027511           72 CGLLTVSTRVGGVPEVLP--DDMVVLAEPD   99 (222)
Q Consensus        72 ~G~PvVa~~~gg~~e~i~--~~~~g~~~~~   99 (222)
                      -|.+.|+|--|...|+..  .+.++|..++
T Consensus       601 NGaltigtlDGanvEi~e~vg~~N~~~fG~  630 (750)
T COG0058         601 NGALTLGTLDGANVEIYEHVGGENGWIFGE  630 (750)
T ss_pred             cCCceeeccccHHHHHHHhcCCCceEEeCC
Confidence            999999999999999996  6777777663

>PRK12446 undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; Reviewed

Probab=96.70  E-value=0.012  Score=50.91  Aligned_cols=70  Identities=7%  Similarity=-0.007  Sum_probs=49.0

Q ss_pred             hHHHHHHHhccEEEEcCCCccccHHHHHHHHhCCcEEEeCCC-Cc---cc-----cccCCceE-EeC-C--CHHHHHHHH
Q 027511           41 AQVRSVLISGHIFLNSSLTEAFCIAILEAASCGLLTVSTRVG-GV---PE-----VLPDDMVV-LAE-P--DPGDMVLAI  107 (222)
Q Consensus        41 ~~~~~ll~~adv~v~~s~~E~~g~~ilEAma~G~PvVa~~~g-g~---~e-----~i~~~~~g-~~~-~--~~~~la~~i  107 (222)
                      +++..+|..||++|    +-+-++++.|++++|+|.|..... ..   .+     .+.+.+.+ ... .  +++.+.+.+
T Consensus       244 ~~m~~~~~~adlvI----sr~G~~t~~E~~~~g~P~I~iP~~~~~~~~~Q~~Na~~l~~~g~~~~l~~~~~~~~~l~~~l  319 (352)
T PRK12446        244 GELPDILAITDFVI----SRAGSNAIFEFLTLQKPMLLIPLSKFASRGDQILNAESFERQGYASVLYEEDVTVNSLIKHV  319 (352)
T ss_pred             hhHHHHHHhCCEEE----ECCChhHHHHHHHcCCCEEEEcCCCCCCCchHHHHHHHHHHCCCEEEcchhcCCHHHHHHHH
Confidence            57899999999998    445588999999999999977432 11   11     22233323 222 2  678999999


Q ss_pred             HHHHhcC
Q 027511          108 RKAISLL  114 (222)
Q Consensus       108 ~~ll~~~  114 (222)
                      .++++++
T Consensus       320 ~~ll~~~  326 (352)
T PRK12446        320 EELSHNN  326 (352)
T ss_pred             HHHHcCH
Confidence            9998764

>PF10087 DUF2325: Uncharacterized protein conserved in bacteria (DUF2325); InterPro: IPR016772 There is currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function

Probab=96.32  E-value=0.015  Score=40.73  Aligned_cols=79  Identities=15%  Similarity=0.179  Sum_probs=55.9

Q ss_pred             EEEEcC-CccHHHHHHHHHHcCCCCcEEEe---CCCChhH--HHHHHHhccEEEEcCC---CccccHHHHHHHHhCCcEE
Q 027511            7 FIVGGD-GPKRVRLEEMREKHSLQDRVEML---GAVPHAQ--VRSVLISGHIFLNSSL---TEAFCIAILEAASCGLLTV   77 (222)
Q Consensus         7 lvi~G~-g~~~~~l~~~~~~~~l~~~V~~~---g~v~~~~--~~~ll~~adv~v~~s~---~E~~g~~ilEAma~G~PvV   77 (222)
                      ++|+|+ ......+++.++++|..  ..++   +......  ++..+.++|+.|.+..   ....-.+--+|-..|+|++
T Consensus         2 vliVGG~~~~~~~~~~~~~~~G~~--~~~hg~~~~~~~~~~~l~~~i~~aD~VIv~t~~vsH~~~~~vk~~akk~~ip~~   79 (97)
T PF10087_consen    2 VLIVGGREDRERRYKRILEKYGGK--LIHHGRDGGDEKKASRLPSKIKKADLVIVFTDYVSHNAMWKVKKAAKKYGIPII   79 (97)
T ss_pred             EEEEcCCcccHHHHHHHHHHcCCE--EEEEecCCCCccchhHHHHhcCCCCEEEEEeCCcChHHHHHHHHHHHHcCCcEE
Confidence            455554 57888999999999874  4555   5554555  8999999999876655   2334445566778899999


Q ss_pred             EeCCCCcccc
Q 027511           78 STRVGGVPEV   87 (222)
Q Consensus        78 a~~~gg~~e~   87 (222)
                      .++..|...+
T Consensus        80 ~~~~~~~~~l   89 (97)
T PF10087_consen   80 YSRSRGVSSL   89 (97)
T ss_pred             EECCCCHHHH
Confidence            9987665443

>COG0381 WecB UDP-N-acetylglucosamine 2-epimerase [Cell envelope biogenesis, outer membrane]

Probab=96.30  E-value=0.06  Score=46.82  Aligned_cols=135  Identities=16%  Similarity=0.130  Sum_probs=93.1

Q ss_pred             CceEEEEEcCCccHHHHHHHH-HHcCCCCcEEEeCCCChhHHHHHHHhccEEEEcCCCccccHHHHHHHHhCCcEEEeC-
Q 027511            3 VKVRFIVGGDGPKRVRLEEMR-EKHSLQDRVEMLGAVPHAQVRSVLISGHIFLNSSLTEAFCIAILEAASCGLLTVSTR-   80 (222)
Q Consensus         3 p~~~lvi~G~g~~~~~l~~~~-~~~~l~~~V~~~g~v~~~~~~~ll~~adv~v~~s~~E~~g~~ilEAma~G~PvVa~~-   80 (222)
                      |++.++.-=.  .+..+++.. +.++..++|.++..+...+...++..|.+.+-    .. |.-.=||-..|+||+.-+ 
T Consensus       236 ~~~~viyp~H--~~~~v~e~~~~~L~~~~~v~li~pl~~~~f~~L~~~a~~ilt----DS-GgiqEEAp~lg~Pvl~lR~  308 (383)
T COG0381         236 PDVIVIYPVH--PRPRVRELVLKRLKNVERVKLIDPLGYLDFHNLMKNAFLILT----DS-GGIQEEAPSLGKPVLVLRD  308 (383)
T ss_pred             CCceEEEeCC--CChhhhHHHHHHhCCCCcEEEeCCcchHHHHHHHHhceEEEe----cC-CchhhhHHhcCCcEEeecc
Confidence            4444444332  124444444 56666678999999999999999999977662    22 445679999999999655 


Q ss_pred             CCCccccccCCceEEeCCCHHHHHHHHHHHHhcCCCCCHHHHHHHHHhcCCHHHHHHHHHHHHHHHh
Q 027511           81 VGGVPEVLPDDMVVLAEPDPGDMVLAIRKAISLLPKIDPQVMHERMKKLYNWHDVAKRTEIVYDRAL  147 (222)
Q Consensus        81 ~gg~~e~i~~~~~g~~~~~~~~la~~i~~ll~~~~~~~~~~~~~~~~~~fs~~~~~~~~~~~~~~~~  147 (222)
                      ...-+|.+..+.+.++..+.+.+.+++..++++++   ..+....+...|.-....+++.+++..-.
T Consensus       309 ~TERPE~v~agt~~lvg~~~~~i~~~~~~ll~~~~---~~~~m~~~~npYgdg~as~rIv~~l~~~~  372 (383)
T COG0381         309 TTERPEGVEAGTNILVGTDEENILDAATELLEDEE---FYERMSNAKNPYGDGNASERIVEILLNYF  372 (383)
T ss_pred             CCCCccceecCceEEeCccHHHHHHHHHHHhhChH---HHHHHhcccCCCcCcchHHHHHHHHHHHh
Confidence            45788888888888888899999999999999854   11111233445665556666666665443

>PF02684 LpxB: Lipid-A-disaccharide synthetase; InterPro: IPR003835 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases

Probab=96.17  E-value=0.043  Score=47.94  Aligned_cols=106  Identities=18%  Similarity=0.237  Sum_probs=66.6

Q ss_pred             CCCceEEEEEcCCccHHH-HHHHHHHcCCCCcEEEeCCCChhHHHHHHHhccEEEEcCCCccccHHHHHHHHhCCcEEEe
Q 027511            1 MRVKVRFIVGGDGPKRVR-LEEMREKHSLQDRVEMLGAVPHAQVRSVLISGHIFLNSSLTEAFCIAILEAASCGLLTVST   79 (222)
Q Consensus         1 ~~p~~~lvi~G~g~~~~~-l~~~~~~~~l~~~V~~~g~v~~~~~~~ll~~adv~v~~s~~E~~g~~ilEAma~G~PvVa~   79 (222)
                      ++|+++|++........+ +++..........+...    ..+..++|+.||+.+.+|     |++-+|++..|+|.|..
T Consensus       215 ~~p~l~fvvp~a~~~~~~~i~~~~~~~~~~~~~~~~----~~~~~~~m~~ad~al~~S-----GTaTLE~Al~g~P~Vv~  285 (373)
T PF02684_consen  215 QRPDLQFVVPVAPEVHEELIEEILAEYPPDVSIVII----EGESYDAMAAADAALAAS-----GTATLEAALLGVPMVVA  285 (373)
T ss_pred             hCCCeEEEEecCCHHHHHHHHHHHHhhCCCCeEEEc----CCchHHHHHhCcchhhcC-----CHHHHHHHHhCCCEEEE
Confidence            468999998875444433 55555555443333322    256778999999987665     78999999999999965


Q ss_pred             CCCC-----------------ccccccCCceE--Ee--CCCHHHHHHHHHHHHhcCC
Q 027511           80 RVGG-----------------VPEVLPDDMVV--LA--EPDPGDMVLAIRKAISLLP  115 (222)
Q Consensus        80 ~~gg-----------------~~e~i~~~~~g--~~--~~~~~~la~~i~~ll~~~~  115 (222)
                      .-..                 ++.++-+....  +.  .-+++.+++++..++++.+
T Consensus       286 Yk~~~lt~~iak~lvk~~~isL~Niia~~~v~PEliQ~~~~~~~i~~~~~~ll~~~~  342 (373)
T PF02684_consen  286 YKVSPLTYFIAKRLVKVKYISLPNIIAGREVVPELIQEDATPENIAAELLELLENPE  342 (373)
T ss_pred             EcCcHHHHHHHHHhhcCCEeechhhhcCCCcchhhhcccCCHHHHHHHHHHHhcCHH
Confidence            4322                 22222222111  11  1268888888888888753

These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. These enzymes belong to the glycosyltransferase family 19 GT19 from CAZY. Lipid-A-disaccharide synthetase 2.4.1.182 from EC is involved with acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase 2.3.1.129 from EC and tetraacyldisaccharide 4'-kinase 2.7.1.130 from EC in the biosynthesis of the phosphorylated glycolipid, lipid A, in the outer membrane of Escherichia coli and other bacteria. These enzymes catalyse the first disaccharide step in the synthesis of lipid-A-disaccharide.; GO: 0008915 lipid-A-disaccharide synthase activity, 0009245 lipid A biosynthetic process

>PF15024 Glyco_transf_18: Glycosyltransferase family 18

Probab=96.02  E-value=0.059  Score=49.00  Aligned_cols=108  Identities=14%  Similarity=0.202  Sum_probs=78.1

Q ss_pred             CCcEEEeCCCChhHHHHHHHhccEEEEcCC-CccccHHHHHHHHhCCcEEEeCCCCcc---------------cc-----
Q 027511           29 QDRVEMLGAVPHAQVRSVLISGHIFLNSSL-TEAFCIAILEAASCGLLTVSTRVGGVP---------------EV-----   87 (222)
Q Consensus        29 ~~~V~~~g~v~~~~~~~ll~~adv~v~~s~-~E~~g~~ilEAma~G~PvVa~~~gg~~---------------e~-----   87 (222)
                      +.-|.-+|.++.+++..+|+.+.+||-... +|  |-+++||+|.|+|.|-+......               ++     
T Consensus       321 P~~V~NHG~l~~~ef~~lL~~akvfiGlGfP~E--gPaPlEAia~G~vFlNp~~~pp~s~~n~~ff~~KPt~r~~~SQhP  398 (559)
T PF15024_consen  321 PSFVKNHGILSGDEFQQLLRKAKVFIGLGFPYE--GPAPLEAIANGCVFLNPRFNPPHSRLNTEFFKGKPTLREWTSQHP  398 (559)
T ss_pred             chhhhhcCcCCHHHHHHHHHhhhEeeecCCCCC--CCChHHHHHcCCccccccCCCCCcccccccccCCCCcceeccCCh
Confidence            445777999999999999999999996655 45  45899999999999976653222               11     


Q ss_pred             -----ccCCceE-EeCCCHHHHHHHHHHHHhcCCCCCHHHHHHHHHhcCCHHHHHHHHHHHHHH
Q 027511           88 -----LPDDMVV-LAEPDPGDMVLAIRKAISLLPKIDPQVMHERMKKLYNWHDVAKRTEIVYDR  145 (222)
Q Consensus        88 -----i~~~~~g-~~~~~~~~la~~i~~ll~~~~~~~~~~~~~~~~~~fs~~~~~~~~~~~~~~  145 (222)
                           +.+-... +...|.+++.++|.+++..+-.       ..+--.|+-+-|.+|+..+++.
T Consensus       399 Y~e~~iG~PhVytVd~~n~~~v~~Avk~il~~~v~-------Py~P~efT~egmLeRv~~~ie~  455 (559)
T PF15024_consen  399 YAEEFIGEPHVYTVDINNSTEVEAAVKAILATPVE-------PYLPYEFTCEGMLERVNALIEK  455 (559)
T ss_pred             HHHhhCCCCeEEEEcCCCHHHHHHHHHHHHhcCCC-------CcCCcccCHHHHHHHHHHHHHh
Confidence                 1111112 2334889999999999988431       1333678999999999888765

>PF00201 UDPGT: UDP-glucoronosyl and UDP-glucosyl transferase; InterPro: IPR002213 UDP glycosyltransferases (UGT) are a superfamily of enzymes that catalyzes the addition of the glycosyl group from a UTP-sugar to a small hydrophobic molecule

Probab=95.86  E-value=0.011  Score=53.43  Aligned_cols=92  Identities=16%  Similarity=0.221  Sum_probs=53.7

Q ss_pred             CcEEEeCCCChhHHHHHHHhc--cEEEEcCCCccccHHHHHHHHhCCcEEEeCC-CC---ccccccCCceE-EeCC---C
Q 027511           30 DRVEMLGAVPHAQVRSVLISG--HIFLNSSLTEAFCIAILEAASCGLLTVSTRV-GG---VPEVLPDDMVV-LAEP---D   99 (222)
Q Consensus        30 ~~V~~~g~v~~~~~~~ll~~a--dv~v~~s~~E~~g~~ilEAma~G~PvVa~~~-gg---~~e~i~~~~~g-~~~~---~   99 (222)
                      +++....|+|+.   ++|+..  ++||    +-+-..++.||+.+|+|+|+-.. |.   ....+.+.+.| ....   +
T Consensus       323 ~n~~~~~W~PQ~---~lL~hp~v~~fi----tHgG~~s~~Ea~~~gvP~l~~P~~~DQ~~na~~~~~~G~g~~l~~~~~~  395 (500)
T PF00201_consen  323 KNVLIVKWLPQN---DLLAHPRVKLFI----THGGLNSTQEALYHGVPMLGIPLFGDQPRNAARVEEKGVGVVLDKNDLT  395 (500)
T ss_dssp             TTEEEESS--HH---HHHTSTTEEEEE----ES--HHHHHHHHHCT--EEE-GCSTTHHHHHHHHHHTTSEEEEGGGC-S
T ss_pred             ceEEEeccccch---hhhhcccceeee----eccccchhhhhhhccCCccCCCCcccCCccceEEEEEeeEEEEEecCCc
Confidence            567888888875   446544  4455    45556799999999999998654 22   22233333333 3322   6


Q ss_pred             HHHHHHHHHHHHhcCCCCCHHHHHHHHHhcCC
Q 027511          100 PGDMVLAIRKAISLLPKIDPQVMHERMKKLYN  131 (222)
Q Consensus       100 ~~~la~~i~~ll~~~~~~~~~~~~~~~~~~fs  131 (222)
                      .+++.++|.++++++.   -.+..+++++.|.
T Consensus       396 ~~~l~~ai~~vl~~~~---y~~~a~~ls~~~~  424 (500)
T PF00201_consen  396 EEELRAAIREVLENPS---YKENAKRLSSLFR  424 (500)
T ss_dssp             HHHHHHHHHHHHHSHH---HHHHHHHHHHTTT
T ss_pred             HHHHHHHHHHHHhhhH---HHHHHHHHHHHHh
Confidence            7999999999999853   3344444555554

This family currently consist of: Mammalian UDP-glucuronosyl transferases (2.4.1.17 from EC) (UDPGT) []. A large family of membrane-bound microsomal enzymes which catalyze the transfer of glucuronic acid to a wide variety of exogenous and endogenous lipophilic substrates. These enzymes are of major importance in the detoxification and subsequent elimination of xenobiotics such as drugs and carcinogens. A large number of putative UDPGT from Caenorhabditis elegans. Mammalian 2-hydroxyacylsphingosine 1-beta-galactosyltransferase [] (2.4.1.45 from EC) (also known as UDP-galactose-ceramide galactosyltransferase). This enzyme catalyzes the transfer of galactose to ceramide, a key enzymatic step in the biosynthesis of galactocerebrosides, which are abundant sphingolipids of the myelin membrane of the central nervous system and peripheral nervous system. Plants flavonol O(3)-glucosyltransferase (2.4.1.91 from EC). An enzyme [] that catalyzes the transfer of glucose from UDP-glucose to a flavanol. This reaction is essential and one of the last steps in anthocyanin pigment biosynthesis. Baculoviruses ecdysteroid UDP-glucosyltransferase (2.4.1 from EC) [] (egt). This enzyme catalyzes the transfer of glucose from UDP-glucose to ectysteroids which are insect molting hormones. The expression of egt in the insect host interferes with the normal insect development by blocking the molting process. Prokaryotic zeaxanthin glucosyltransferase (2.4.1 from EC) (gene crtX), an enzyme involved in carotenoid biosynthesis and that catalyses the glycosylation reaction which converts zeaxanthin to zeaxanthin-beta-diglucoside. Streptomyces macrolide glycosyltransferases (2.4.1 from EC) []. These enzymes specifically inactivates macrolide anitibiotics via 2'-O-glycosylation using UDP-glucose. These enzymes share a conserved domain of about 50 amino acid residues located in their C-terminal section.; GO: 0016758 transferase activity, transferring hexosyl groups, 0008152 metabolic process; PDB: 3HBJ_A 3HBF_A 2PQ6_A 3IA7_B 3RSC_A 3IAA_B 2IYA_A 2IYF_B 2O6L_A 2VCH_A ....

>PF07429 Glyco_transf_56: 4-alpha-L-fucosyltransferase glycosyl transferase group 56; InterPro: IPR009993 This family contains the bacterial enzyme 4-alpha-L-fucosyltransferase (Fuc4NAc transferase) (approximately 360 residues long)

Probab=95.68  E-value=0.26  Score=42.37  Aligned_cols=110  Identities=13%  Similarity=0.041  Sum_probs=73.8

Q ss_pred             CceEEEEE-cCCc----cHHHHHHHHHHcCCCCcEEE-eCCCChhHHHHHHHhccEEEEcCC-CccccHHHHHHHHhCCc
Q 027511            3 VKVRFIVG-GDGP----KRVRLEEMREKHSLQDRVEM-LGAVPHAQVRSVLISGHIFLNSSL-TEAFCIAILEAASCGLL   75 (222)
Q Consensus         3 p~~~lvi~-G~g~----~~~~l~~~~~~~~l~~~V~~-~g~v~~~~~~~ll~~adv~v~~s~-~E~~g~~ilEAma~G~P   75 (222)
                      .++++++- |-|.    ..+++++.++++--.+++.. ..++|-+|+.+++++||+.++... -.+.| .+.=.+.+|+|
T Consensus       213 ~~~kIivPLsYg~~n~~Yi~~V~~~~~~lF~~~~~~iL~e~mpf~eYl~lL~~cDl~if~~~RQQgiG-nI~lLl~~G~~  291 (360)
T PF07429_consen  213 DDVKIIVPLSYGANNQAYIQQVIQAGKELFGAENFQILTEFMPFDEYLALLSRCDLGIFNHNRQQGIG-NICLLLQLGKK  291 (360)
T ss_pred             CCeEEEEECCCCCchHHHHHHHHHHHHHhcCccceeEhhhhCCHHHHHHHHHhCCEEEEeechhhhHh-HHHHHHHcCCe
Confidence            35666554 3332    33556666666644457776 568899999999999999998876 67777 45568999999


Q ss_pred             EEEeCCCCccccccCCc-eE-EeCC--CHHHHHHHHHHHHhc
Q 027511           76 TVSTRVGGVPEVLPDDM-VV-LAEP--DPGDMVLAIRKAISL  113 (222)
Q Consensus        76 vVa~~~gg~~e~i~~~~-~g-~~~~--~~~~la~~i~~ll~~  113 (222)
                      |+-+....+-..+.+.. .. +..+  |.+.+.++=+++...
T Consensus       292 v~L~~~np~~~~l~~~~ipVlf~~d~L~~~~v~ea~rql~~~  333 (360)
T PF07429_consen  292 VFLSRDNPFWQDLKEQGIPVLFYGDELDEALVREAQRQLANV  333 (360)
T ss_pred             EEEecCChHHHHHHhCCCeEEeccccCCHHHHHHHHHHHhhC
Confidence            99877665555554443 23 3323  566677766666654

This catalyses the synthesis of Fuc4NAc-ManNAcA-GlcNAc-PP-Und (lipid III) as part of the biosynthetic pathway of enterobacterial common antigen (ECA), a polysaccharide comprised of the trisaccharide repeat unit Fuc4NAc-ManNAcA-GlcNAc [].; GO: 0008417 fucosyltransferase activity, 0009246 enterobacterial common antigen biosynthetic process, 0009276 Gram-negative-bacterium-type cell wall

>cd03789 GT1_LPS_heptosyltransferase Lipopolysaccharide heptosyltransferase is involved in the biosynthesis of lipooligosaccharide (LOS)

Probab=95.52  E-value=0.083  Score=43.94  Aligned_cols=75  Identities=17%  Similarity=0.171  Sum_probs=54.8

Q ss_pred             ceEEEEEcCCccHHHHHHHHHHcCCCCcEEEeCCCChhHHHHHHHhccEEEEcCCCccccHHHHHHHHhCCcEEEeCCCC
Q 027511            4 KVRFIVGGDGPKRVRLEEMREKHSLQDRVEMLGAVPHAQVRSVLISGHIFLNSSLTEAFCIAILEAASCGLLTVSTRVGG   83 (222)
Q Consensus         4 ~~~lvi~G~g~~~~~l~~~~~~~~l~~~V~~~g~v~~~~~~~ll~~adv~v~~s~~E~~g~~ilEAma~G~PvVa~~~gg   83 (222)
                      ++++++.|...+.+..+++.+..+....+.+.|..+-.++..+++.||++|.+..    | .+.-|.+.|+|+|+--.+.
T Consensus       153 ~~~ivl~g~~~e~~~~~~i~~~~~~~~~~~~~~~~~l~e~~~li~~~~l~I~~Ds----g-~~HlA~a~~~p~i~l~g~~  227 (279)
T cd03789         153 GARVVLTGGPAERELAEEIAAALGGPRVVNLAGKTSLRELAALLARADLVVTNDS----G-PMHLAAALGTPTVALFGPT  227 (279)
T ss_pred             CCEEEEEechhhHHHHHHHHHhcCCCccccCcCCCCHHHHHHHHHhCCEEEeeCC----H-HHHHHHHcCCCEEEEECCC
Confidence            5788999977776777776665533334556788788999999999999997642    3 4455679999999754433

Lipopolysaccharide (LPS) is a major component of the outer membrane of gram-negative bacteria. LPS heptosyltransferase transfers heptose molecules from ADP-heptose to 3-deoxy-D-manno-octulosonic acid (KDO), a part of the inner core component of LPS. This family belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.

>COG0763 LpxB Lipid A disaccharide synthetase [Cell envelope biogenesis, outer membrane]

Probab=95.36  E-value=0.099  Score=45.43  Aligned_cols=105  Identities=20%  Similarity=0.177  Sum_probs=59.3

Q ss_pred             CCCceEEEEEcCCccHHHHHHHHH-HcCCCCcEEEeCCCChhHHHHHHHhccEEEEcCCCccccHHHHHHHHhCCcEEEe
Q 027511            1 MRVKVRFIVGGDGPKRVRLEEMRE-KHSLQDRVEMLGAVPHAQVRSVLISGHIFLNSSLTEAFCIAILEAASCGLLTVST   79 (222)
Q Consensus         1 ~~p~~~lvi~G~g~~~~~l~~~~~-~~~l~~~V~~~g~v~~~~~~~ll~~adv~v~~s~~E~~g~~ilEAma~G~PvVa~   79 (222)
                      ++|+.+|++--.....+.++.... .......+.+    ...+..+.+..||+.+..|     |++.+|+|.+|+|.|.+
T Consensus       219 ~~~~~~~vlp~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~a~~~aD~al~aS-----GT~tLE~aL~g~P~Vv~  289 (381)
T COG0763         219 RYPDLKFVLPLVNAKYRRIIEEALKWEVAGLSLIL----IDGEKRKAFAAADAALAAS-----GTATLEAALAGTPMVVA  289 (381)
T ss_pred             hCCCceEEEecCcHHHHHHHHHHhhccccCceEEe----cCchHHHHHHHhhHHHHhc-----cHHHHHHHHhCCCEEEE
Confidence            357777777665444333333322 2221111222    2356777888888876544     78999999999999854


Q ss_pred             C-CCC----------------ccccccCCceE--Ee--CCCHHHHHHHHHHHHhcC
Q 027511           80 R-VGG----------------VPEVLPDDMVV--LA--EPDPGDMVLAIRKAISLL  114 (222)
Q Consensus        80 ~-~gg----------------~~e~i~~~~~g--~~--~~~~~~la~~i~~ll~~~  114 (222)
                      - ...                ++.++-+....  +.  .-.++.+++++..++.+.
T Consensus       290 Yk~~~it~~iak~lvk~~yisLpNIi~~~~ivPEliq~~~~pe~la~~l~~ll~~~  345 (381)
T COG0763         290 YKVKPITYFIAKRLVKLPYVSLPNILAGREIVPELIQEDCTPENLARALEELLLNG  345 (381)
T ss_pred             EeccHHHHHHHHHhccCCcccchHHhcCCccchHHHhhhcCHHHHHHHHHHHhcCh
Confidence            3 322                22222222110  11  115788888888888775

>PLN02670 transferase, transferring glycosyl groups

Probab=95.36  E-value=0.057  Score=48.70  Aligned_cols=110  Identities=12%  Similarity=0.034  Sum_probs=61.5

Q ss_pred             EEEeCCCChhHHHHHHHhccEEEEcCCCccccHHHHHHHHhCCcEEEeCCCC----ccccccCCceEEeC--------CC
Q 027511           32 VEMLGAVPHAQVRSVLISGHIFLNSSLTEAFCIAILEAASCGLLTVSTRVGG----VPEVLPDDMVVLAE--------PD   99 (222)
Q Consensus        32 V~~~g~v~~~~~~~ll~~adv~v~~s~~E~~g~~ilEAma~G~PvVa~~~gg----~~e~i~~~~~g~~~--------~~   99 (222)
                      +.+.+|+|+.+   +|+...+..+-  +.+-.++++||+++|+|+|+....+    ....+...+.|+..        -+
T Consensus       341 ~vv~~W~PQ~~---IL~H~~v~~Fv--tHcGwnS~~Eai~~GVP~l~~P~~~DQ~~Na~~v~~~g~Gv~l~~~~~~~~~~  415 (472)
T PLN02670        341 MIHVGWVPQVK---ILSHESVGGFL--THCGWNSVVEGLGFGRVLILFPVLNEQGLNTRLLHGKKLGLEVPRDERDGSFT  415 (472)
T ss_pred             eEEeCcCCHHH---HhcCcccceee--ecCCcchHHHHHHcCCCEEeCcchhccHHHHHHHHHcCeeEEeeccccCCcCc
Confidence            44556776654   44444442211  3344578999999999999865432    33333333444321        15


Q ss_pred             HHHHHHHHHHHHhcCC----CCCHHHHHHHHHhcCCHHHHHHHHHHHHHHH
Q 027511          100 PGDMVLAIRKAISLLP----KIDPQVMHERMKKLYNWHDVAKRTEIVYDRA  146 (222)
Q Consensus       100 ~~~la~~i~~ll~~~~----~~~~~~~~~~~~~~fs~~~~~~~~~~~~~~~  146 (222)
                      .+++.+++.+++.+++    +....+.++.++..=+...+++.+.+.+.+.
T Consensus       416 ~e~i~~av~~vm~~~~g~~~r~~a~~l~~~~~~~~~~~~~~~~~~~~l~~~  466 (472)
T PLN02670        416 SDSVAESVRLAMVDDAGEEIRDKAKEMRNLFGDMDRNNRYVDELVHYLREN  466 (472)
T ss_pred             HHHHHHHHHHHhcCcchHHHHHHHHHHHHHHhCcchhHHHHHHHHHHHHHh
Confidence            7999999999997653    2222333333334444455555555554443

>TIGR02093 P_ylase glycogen/starch/alpha-glucan phosphorylases

Probab=95.35  E-value=0.053  Score=51.44  Aligned_cols=102  Identities=15%  Similarity=0.126  Sum_probs=77.8

Q ss_pred             ceEEEEEcCC-cc---HHHHHHHHHHcC--------CCC--cEEEeCCCChhHHHHHHHhccEEEEcCC--CccccHHHH
Q 027511            4 KVRFIVGGDG-PK---RVRLEEMREKHS--------LQD--RVEMLGAVPHAQVRSVLISGHIFLNSSL--TEAFCIAIL   67 (222)
Q Consensus         4 ~~~lvi~G~g-~~---~~~l~~~~~~~~--------l~~--~V~~~g~v~~~~~~~ll~~adv~v~~s~--~E~~g~~il   67 (222)
                      ...++++|.. |.   .+.+.+++....        ..+  +|.|+....-+--..++.++|+..+.|.  .|+.|+.=+
T Consensus       566 P~~~IFaGKAaP~y~~aK~iIklI~~va~~iN~Dp~v~~~lkVVFlenY~VslAe~iipaaDvseqistag~EASGTsnM  645 (794)
T TIGR02093       566 PRTVIFGGKAAPGYHMAKLIIKLINSVAEVVNNDPAVGDKLKVVFVPNYNVSLAELIIPAADLSEQISTAGKEASGTGNM  645 (794)
T ss_pred             CeEEEEEecCCCCcHHHHHHHHHHHHHHHHhccChhhCCceeEEEeCCCChHHHHHhhhhhhhhhhCCCCCccccCcchh
Confidence            4578999942 21   233333333322        334  7999999888888899999999998887  899999999


Q ss_pred             HHHHhCCcEEEeCCCCccccccC--CceEEeCC-CHHHHHH
Q 027511           68 EAASCGLLTVSTRVGGVPEVLPD--DMVVLAEP-DPGDMVL  105 (222)
Q Consensus        68 EAma~G~PvVa~~~gg~~e~i~~--~~~g~~~~-~~~~la~  105 (222)
                      =+|.-|.+.++|--|...|+..+  +.++|..+ +.+++.+
T Consensus       646 K~alNGaltlgtlDGanvEi~e~vG~eN~fiFG~~~~ev~~  686 (794)
T TIGR02093       646 KFMLNGALTIGTLDGANVEIREEVGAENIFIFGLTVEEVEA  686 (794)
T ss_pred             HHHhcCcceeecccchhHHHHHHhCcccEEEcCCCHHHHHH
Confidence            99999999999999999999976  67778777 5555554

This family consists of phosphorylases. Members use phosphate to break alpha 1,4 linkages between pairs of glucose residues at the end of long glucose polymers, releasing alpha-D-glucose 1-phosphate. The nomenclature convention is to preface the name according to the natural substrate, as in glycogen phosphorylase, starch phosphorylase, maltodextrin phosphorylase, etc. Name differences among these substrates reflect differences in patterns of branching with alpha 1,6 linkages. Members include allosterically regulated and unregulated forms. A related family, TIGR02094, contains examples known to act well on particularly small alpha 1,4 glucans, as may be found after import from exogenous sources.

>PLN03004 UDP-glycosyltransferase

Probab=95.33  E-value=0.036  Score=49.74  Aligned_cols=79  Identities=15%  Similarity=0.066  Sum_probs=52.5

Q ss_pred             CcEEEeCCCChhHHHHHHHhccEEEEcCCCccccHHHHHHHHhCCcEEEeCC----CCccccccC-CceEE-eC------
Q 027511           30 DRVEMLGAVPHAQVRSVLISGHIFLNSSLTEAFCIAILEAASCGLLTVSTRV----GGVPEVLPD-DMVVL-AE------   97 (222)
Q Consensus        30 ~~V~~~g~v~~~~~~~ll~~adv~v~~s~~E~~g~~ilEAma~G~PvVa~~~----gg~~e~i~~-~~~g~-~~------   97 (222)
                      .++.+.+|+|+.+   +|+.+++..+-  +.+--++++||+++|+|+|+...    ......+.+ -+.|+ ..      
T Consensus       334 ~g~~v~~W~PQ~~---iL~H~~v~~Fv--TH~G~nS~lEal~~GVP~v~~P~~~DQ~~na~~~~~~~g~g~~l~~~~~~~  408 (451)
T PLN03004        334 KGMVVKSWAPQVP---VLNHKAVGGFV--THCGWNSILEAVCAGVPMVAWPLYAEQRFNRVMIVDEIKIAISMNESETGF  408 (451)
T ss_pred             CcEEEEeeCCHHH---HhCCCccceEe--ccCcchHHHHHHHcCCCEEeccccccchhhHHHHHHHhCceEEecCCcCCc
Confidence            4677888988775   66777773222  34445789999999999997554    334444432 13332 21      


Q ss_pred             CCHHHHHHHHHHHHhc
Q 027511           98 PDPGDMVLAIRKAISL  113 (222)
Q Consensus        98 ~~~~~la~~i~~ll~~  113 (222)
                      -+.+++++++++++.+
T Consensus       409 ~~~e~l~~av~~vm~~  424 (451)
T PLN03004        409 VSSTEVEKRVQEIIGE  424 (451)
T ss_pred             cCHHHHHHHHHHHhcC
Confidence            2679999999999875

>PLN02410 UDP-glucoronosyl/UDP-glucosyl transferase family protein

Probab=95.30  E-value=0.051  Score=48.75  Aligned_cols=78  Identities=15%  Similarity=0.146  Sum_probs=51.0

Q ss_pred             CcEEEeCCCChhHHHHHHHhccE--EEEcCCCccccHHHHHHHHhCCcEEEeCCCC----ccccccCC-ceEEeC---CC
Q 027511           30 DRVEMLGAVPHAQVRSVLISGHI--FLNSSLTEAFCIAILEAASCGLLTVSTRVGG----VPEVLPDD-MVVLAE---PD   99 (222)
Q Consensus        30 ~~V~~~g~v~~~~~~~ll~~adv--~v~~s~~E~~g~~ilEAma~G~PvVa~~~gg----~~e~i~~~-~~g~~~---~~   99 (222)
                      +|....+|+|+.+   +|....+  ||    +.+--++++||+++|+|+|+....+    ....+.+. +.|+..   -+
T Consensus       324 ~~g~v~~w~PQ~~---iL~h~~v~~fv----tH~G~nS~~Ea~~~GvP~l~~P~~~DQ~~na~~~~~~~~~G~~~~~~~~  396 (451)
T PLN02410        324 GRGYIVKWAPQKE---VLSHPAVGGFW----SHCGWNSTLESIGEGVPMICKPFSSDQKVNARYLECVWKIGIQVEGDLD  396 (451)
T ss_pred             CCeEEEccCCHHH---HhCCCccCeee----ecCchhHHHHHHHcCCCEEeccccccCHHHHHHHHHHhCeeEEeCCccc
Confidence            5666778887765   4555444  54    3344568999999999999765432    33333322 333322   27


Q ss_pred             HHHHHHHHHHHHhcC
Q 027511          100 PGDMVLAIRKAISLL  114 (222)
Q Consensus       100 ~~~la~~i~~ll~~~  114 (222)
                      .+++++++++++.++
T Consensus       397 ~~~v~~av~~lm~~~  411 (451)
T PLN02410        397 RGAVERAVKRLMVEE  411 (451)
T ss_pred             HHHHHHHHHHHHcCC
Confidence            799999999999764

>PLN02562 UDP-glycosyltransferase

Probab=95.20  E-value=0.032  Score=50.01  Aligned_cols=80  Identities=14%  Similarity=0.049  Sum_probs=48.3

Q ss_pred             CcEEEeCCCChhHHHHHHHhccEEEEcCCCccccHHHHHHHHhCCcEEEeCCC----CccccccCC-ceEEe--CCCHHH
Q 027511           30 DRVEMLGAVPHAQVRSVLISGHIFLNSSLTEAFCIAILEAASCGLLTVSTRVG----GVPEVLPDD-MVVLA--EPDPGD  102 (222)
Q Consensus        30 ~~V~~~g~v~~~~~~~ll~~adv~v~~s~~E~~g~~ilEAma~G~PvVa~~~g----g~~e~i~~~-~~g~~--~~~~~~  102 (222)
                      +|+.+.+++|+.+   +|....+..+-  +.+--++++||+++|+|+|+....    .....+.+. ..++.  ..+.++
T Consensus       328 ~~~~v~~w~PQ~~---iL~h~~v~~fv--tH~G~nS~~Eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~g~~~~~~~~~~  402 (448)
T PLN02562        328 KQGKVVSWAPQLE---VLKHQAVGCYL--THCGWNSTMEAIQCQKRLLCYPVAGDQFVNCAYIVDVWKIGVRISGFGQKE  402 (448)
T ss_pred             cCEEEEecCCHHH---HhCCCccceEE--ecCcchhHHHHHHcCCCEEeCCcccchHHHHHHHHHHhCceeEeCCCCHHH
Confidence            4555666666554   34444432221  334457889999999999975543    333344332 22332  237799


Q ss_pred             HHHHHHHHHhcC
Q 027511          103 MVLAIRKAISLL  114 (222)
Q Consensus       103 la~~i~~ll~~~  114 (222)
                      +.+++++++.++
T Consensus       403 l~~~v~~~l~~~  414 (448)
T PLN02562        403 VEEGLRKVMEDS  414 (448)
T ss_pred             HHHHHHHHhCCH
Confidence            999999999763

>PRK14986 glycogen phosphorylase; Provisional

Probab=95.16  E-value=0.094  Score=49.96  Aligned_cols=75  Identities=19%  Similarity=0.158  Sum_probs=65.3

Q ss_pred             cEEEeCCCChhHHHHHHHhccEEEEcCC--CccccHHHHHHHHhCCcEEEeCCCCccccccC--CceEEeCC-CHHHHHH
Q 027511           31 RVEMLGAVPHAQVRSVLISGHIFLNSSL--TEAFCIAILEAASCGLLTVSTRVGGVPEVLPD--DMVVLAEP-DPGDMVL  105 (222)
Q Consensus        31 ~V~~~g~v~~~~~~~ll~~adv~v~~s~--~E~~g~~ilEAma~G~PvVa~~~gg~~e~i~~--~~~g~~~~-~~~~la~  105 (222)
                      +|.|+....-+--..++.++|+..+.|.  .|+.|+.=+=+|.-|.+.++|--|...|+..+  +.++|..+ +.+++.+
T Consensus       623 kVVFlenY~vslAe~lipg~Dv~eqis~ag~EASGTsnMK~alNGaLtlgtlDG~nvEi~e~vG~eN~~~fG~~~~ev~~  702 (815)
T PRK14986        623 KVVFIPNYSVSLAQLIIPAADLSEQISLAGTEASGTSNMKFALNGALTIGTLDGANVEMLEHVGEENIFIFGNTAEEVEA  702 (815)
T ss_pred             eEEEeCCCCHHHHHHhhhhhhhhhhCCCCCccccCcchhhHHhcCceeeeccCCchhHHHHhcCCCcEEEeCCCHHHHHH
Confidence            7999999888888889999999999888  89999999999999999999999999999986  67788776 5555544

>PF00343 Phosphorylase: Carbohydrate phosphorylase; InterPro: IPR000811 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases

Probab=94.79  E-value=0.14  Score=48.09  Aligned_cols=100  Identities=20%  Similarity=0.234  Sum_probs=64.7

Q ss_pred             ceEEEEEcCC-ccH---HHHHHHHHHc--------CCCC--cEEEeCCCChhHHHHHHHhccEEEEcCC--CccccHHHH
Q 027511            4 KVRFIVGGDG-PKR---VRLEEMREKH--------SLQD--RVEMLGAVPHAQVRSVLISGHIFLNSSL--TEAFCIAIL   67 (222)
Q Consensus         4 ~~~lvi~G~g-~~~---~~l~~~~~~~--------~l~~--~V~~~g~v~~~~~~~ll~~adv~v~~s~--~E~~g~~il   67 (222)
                      .++++++|.. |..   +++.+++.+.        .+.+  +|.|+....-+-...++.++||..+.|+  .|+.|+.-+
T Consensus       483 Pv~~IFaGKAhP~d~~gK~iIk~I~~va~~in~Dp~v~~~lkVvFlenYdvslA~~lipg~DVwln~p~~p~EASGTSgM  562 (713)
T PF00343_consen  483 PVQFIFAGKAHPGDYMGKEIIKLINNVAEVINNDPEVGDRLKVVFLENYDVSLAEKLIPGVDVWLNIPTRPKEASGTSGM  562 (713)
T ss_dssp             -EEEEEE----TT-HHHHHHHHHHHHHHHHHCT-TTTCCGEEEEEETT-SHHHHHHHGGG-SEEEE---TTSSSS-SHHH
T ss_pred             CeEEEEeccCCCCcHHHHHHHHHHHHHHHHHhcChhhccceeEEeecCCcHHHHHHHhhhhhhhhhCCCCCccccCCCcc
Confidence            4789999943 211   3333333221        2334  7999999888888889999999999888  899999999


Q ss_pred             HHHHhCCcEEEeCCCCccccccC--CceEEeCC-CHHHH
Q 027511           68 EAASCGLLTVSTRVGGVPEVLPD--DMVVLAEP-DPGDM  103 (222)
Q Consensus        68 EAma~G~PvVa~~~gg~~e~i~~--~~~g~~~~-~~~~l  103 (222)
                      =+|.-|.+.+++--|...|+...  ..++|..+ +.+++
T Consensus       563 K~~~NGaL~lstlDG~niEi~e~vG~eN~fiFG~~~~ev  601 (713)
T PF00343_consen  563 KAAMNGALNLSTLDGWNIEIAEAVGEENIFIFGLTAEEV  601 (713)
T ss_dssp             HHHHTT-EEEEESSTCHHHHHHHH-GGGSEEES-BHHHH
T ss_pred             hhhcCCCeEEecccchhHHHHHhcCCCcEEEcCCCHHHH
Confidence            99999999999999999998753  23445444 44443

These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 35 GT35 from CAZY comprises enzymes with only one known activity; glycogen and starch phosphorylase (2.4.1.1 from EC). The main role of glycogen phosphorylase (GPase) is to provide phosphorylated glucose molecules (G-1-P) []. GPase is a highly regulated allosteric enzyme. The net effect of the regulatory site allows the enzyme to operate at a variety of rates; the enzyme is not simply regulated as "on" or "off", but rather it can be thought of being set to operate at an ideal rate based on changing conditions at in the cell. The most important allosteric effector is the phosphate molecule covalently attached to Ser14. This switches GPase from the b (inactive) state to the a (active) state. Upon phosphorylation, GPase attains about 80% of its Vmax. When the enzyme is not phosphorylated, GPase activity is practically non-existent at low AMP levels. There is some apparent controversy as to the structure of GPase. All sources agree that the enzyme is multimeric, but there is apparent controversy as to the enzyme being a tetramer or a dimer. Apparently, GPase (in the a form) forms tetramers in the crystal form. The consensus seems to be that `regardless of the a or b form, GPase functions as a dimer in vivo []. The GPase monomer is best described as consisting of two domains, an N-terminal domain and a C-terminal domain []. The C-terminal domain is often referred to as the catalytic domain. It consists of a beta-sheet core surrounded by layers of helical segments []. The vitamin cofactor pyridoxal phosphate (PLP) is covalently attached to the amino acid backbone. The N-terminal domain also consists of a central beta-sheet core and is surrounded by layers of helical segments. The N-terminal domain contains different allosteric effector sites to regulate the enzyme. Bacterial phosphorylases follow the same catalytic mechanisms as their plant and animal counterparts, but differ considerably in terms of their substrate specificity and regulation. The catalytic domains are highly conserved while the regulatory sites are only poorly conserved. For maltodextrin phosphorylase from Escherichia coli the physiological role of the enzyme in the utilisation of maltidextrins is known in detail; that of all the other bacterial phosphorylases is still unclear. Roles in regulatuon of endogenous glycogen metabolism in periods of starvation, and sporulation, stress response or quick adaptation to changing environments are possible [].; GO: 0004645 phosphorylase activity, 0005975 carbohydrate metabolic process; PDB: 1YGP_B 2AW3_B 2AV6_B 1AHP_B 1QM5_A 1L5W_A 2ECP_A 2ASV_A 1L5V_B 1E4O_B ....

>PF01113 DapB_N: Dihydrodipicolinate reductase, N-terminus; InterPro: IPR000846 Dihydrodipicolinate reductase catalyzes the second step in the biosynthesis of diaminopimelic acid and lysine, the NAD or NADP-dependent reduction of 2,3-dihydrodipicolinate into 2,3,4,5-tetrahydrodipicolinate [, , ]

Probab=94.57  E-value=0.085  Score=38.60  Aligned_cols=78  Identities=18%  Similarity=0.182  Sum_probs=55.2

Q ss_pred             eEEEEEcC-CccHHHHHHHHHHcCCCCcEEEeCCCC------------------------hhHHHHHHHhccEEEEcCCC
Q 027511            5 VRFIVGGD-GPKRVRLEEMREKHSLQDRVEMLGAVP------------------------HAQVRSVLISGHIFLNSSLT   59 (222)
Q Consensus         5 ~~lvi~G~-g~~~~~l~~~~~~~~l~~~V~~~g~v~------------------------~~~~~~ll~~adv~v~~s~~   59 (222)
                      +++.|.|. |.+-..+.+.+.+.   +.+.+.|.+.                        .+++.+++..+|+.|--|..
T Consensus         1 mrV~i~G~~GrMG~~i~~~i~~~---~~~~lv~~v~~~~~~~~g~d~g~~~~~~~~~~~v~~~l~~~~~~~DVvIDfT~p   77 (124)
T PF01113_consen    1 MRVGIVGASGRMGRAIAEAILES---PGFELVGAVDRKPSAKVGKDVGELAGIGPLGVPVTDDLEELLEEADVVIDFTNP   77 (124)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHS---TTEEEEEEEETTTSTTTTSBCHHHCTSST-SSBEBS-HHHHTTH-SEEEEES-H
T ss_pred             CEEEEECCCCHHHHHHHHHHHhc---CCcEEEEEEecCCcccccchhhhhhCcCCcccccchhHHHhcccCCEEEEcCCh
Confidence            57899997 98888888888763   2344444432                        15689999999999988877


Q ss_pred             ccccHHHHHHHHhCCcEEEeCCCCcc
Q 027511           60 EAFCIAILEAASCGLLTVSTRVGGVP   85 (222)
Q Consensus        60 E~~g~~ilEAma~G~PvVa~~~gg~~   85 (222)
                      +..--.+-.++.+|+|+|....|...
T Consensus        78 ~~~~~~~~~~~~~g~~~ViGTTG~~~  103 (124)
T PF01113_consen   78 DAVYDNLEYALKHGVPLVIGTTGFSD  103 (124)
T ss_dssp             HHHHHHHHHHHHHT-EEEEE-SSSHH
T ss_pred             HHhHHHHHHHHhCCCCEEEECCCCCH
Confidence            77766777888999999987777643

In Escherichia coli and Mycobacterium tuberculosis, dihydrodipicolinate reductase has equal specificity for NADH and NADPH, however in Thermotoga maritima there it has a greater affinity for NADPH []. In addition, the enzyme is inhibited by high concentrations of its substrate, which consequently acts as a feedback control on the lysine biosynthesis pathway. In T. maritima, the enzyme also lacks N-terminal and C-terminal loops which are present in enzyme of the former two organisms. This entry represents the N-terminal domain of dihydrodipicolinate reductase which binds the dinucleotide NAD(P)H.; GO: 0008839 dihydrodipicolinate reductase activity, 0009089 lysine biosynthetic process via diaminopimelate, 0055114 oxidation-reduction process; PDB: 3QY9_D 1VM6_C 1ARZ_A 1DIH_A 1DRW_A 1DRV_A 1DRU_A 2DAP_A 1DAP_B 3DAP_A ....

>cd04300 GT1_Glycogen_Phosphorylase This is a family of oligosaccharide phosphorylases

Probab=94.33  E-value=0.14  Score=48.86  Aligned_cols=75  Identities=15%  Similarity=0.106  Sum_probs=64.8

Q ss_pred             cEEEeCCCChhHHHHHHHhccEEEEcCC--CccccHHHHHHHHhCCcEEEeCCCCccccccC--CceEEeCC-CHHHHHH
Q 027511           31 RVEMLGAVPHAQVRSVLISGHIFLNSSL--TEAFCIAILEAASCGLLTVSTRVGGVPEVLPD--DMVVLAEP-DPGDMVL  105 (222)
Q Consensus        31 ~V~~~g~v~~~~~~~ll~~adv~v~~s~--~E~~g~~ilEAma~G~PvVa~~~gg~~e~i~~--~~~g~~~~-~~~~la~  105 (222)
                      +|.|+....-+--..++.+||+..+.|.  .|+.|+.=+=+|.-|.+.++|--|...|+..+  +.++|..+ +.+++.+
T Consensus       610 kVVFlenY~VslAe~iipaaDvseqis~ag~EASGTsnMK~~lNGaltlgtlDGanvEi~e~vG~eN~fiFG~~~~ev~~  689 (797)
T cd04300         610 KVVFLPNYNVSLAEKIIPAADLSEQISTAGKEASGTGNMKFMLNGALTIGTLDGANVEIAEEVGEENIFIFGLTAEEVEA  689 (797)
T ss_pred             EEEEeCCCChHHHHHhhhhhhhhhhCCCCCccccCCchhhHHhcCceeeecccchhHHHHHHhCcCcEEEeCCCHHHHHH
Confidence            7999999888888899999999998887  89999999999999999999999999999886  67777776 5555443

It includes yeast and mammalian glycogen phosphorylases, plant starch/glucan phosphorylase, as well as the maltodextrin phosphorylases of bacteria. The members of this family catalyze the breakdown of oligosaccharides into glucose-1-phosphate units. They are important allosteric enzymes in carbohydrate metabolism. The allosteric control mechanisms of yeast and mammalian members of this family are different from that of bacterial members. The members of this family belong to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.

>PRK14985 maltodextrin phosphorylase; Provisional

Probab=94.19  E-value=0.16  Score=48.34  Aligned_cols=75  Identities=19%  Similarity=0.088  Sum_probs=64.5

Q ss_pred             cEEEeCCCChhHHHHHHHhccEEEEcCC--CccccHHHHHHHHhCCcEEEeCCCCccccccC--CceEEeCC-CHHHHHH
Q 027511           31 RVEMLGAVPHAQVRSVLISGHIFLNSSL--TEAFCIAILEAASCGLLTVSTRVGGVPEVLPD--DMVVLAEP-DPGDMVL  105 (222)
Q Consensus        31 ~V~~~g~v~~~~~~~ll~~adv~v~~s~--~E~~g~~ilEAma~G~PvVa~~~gg~~e~i~~--~~~g~~~~-~~~~la~  105 (222)
                      +|.|+....-+-...++.++|+..+.|.  .|+.|+.=+=+|.-|.+.++|--|...|+..+  +.++|..+ +.+++.+
T Consensus       609 kVVFlenY~VslAe~lipaaDvseqis~ag~EASGTsnMK~amNGaLtlgtlDGanvEi~e~vG~eN~f~fG~~~~ev~~  688 (798)
T PRK14985        609 KVVFLPDYCVSAAELLIPAADISEQISTAGKEASGTGNMKLALNGALTVGTLDGANVEIAEQVGEENIFIFGHTVEQVKA  688 (798)
T ss_pred             eEEEeCCCChHHHHHHhhhhhhhhhCCCCCccccCcchhHHHhcCceeeecccchHHHHHHHhCcCcEEEeCCCHHHHHH
Confidence            7999999888888899999999999888  89999999999999999999999999999875  66777776 5555444

>PLN02173 UDP-glucosyl transferase family protein

Probab=94.10  E-value=0.14  Score=45.98  Aligned_cols=80  Identities=19%  Similarity=0.111  Sum_probs=50.4

Q ss_pred             CcEEEeCCCChhHHHHHHHhccEEEEcCCCccccHHHHHHHHhCCcEEEeCCCC----ccccccCC-ceE--EeC-----
Q 027511           30 DRVEMLGAVPHAQVRSVLISGHIFLNSSLTEAFCIAILEAASCGLLTVSTRVGG----VPEVLPDD-MVV--LAE-----   97 (222)
Q Consensus        30 ~~V~~~g~v~~~~~~~ll~~adv~v~~s~~E~~g~~ilEAma~G~PvVa~~~gg----~~e~i~~~-~~g--~~~-----   97 (222)
                      +++.+.+|+|+.+   +|....+..+-  +.+-.++++||+++|+|+|+...-+    ....+.+. ..|  +..     
T Consensus       317 ~~~~i~~W~PQ~~---iL~H~~v~~Fv--tHcGwnS~~Eai~~GVP~l~~P~~~DQ~~Na~~v~~~~g~Gv~v~~~~~~~  391 (449)
T PLN02173        317 DKSLVLKWSPQLQ---VLSNKAIGCFM--THCGWNSTMEGLSLGVPMVAMPQWTDQPMNAKYIQDVWKVGVRVKAEKESG  391 (449)
T ss_pred             CceEEeCCCCHHH---HhCCCccceEE--ecCccchHHHHHHcCCCEEecCchhcchHHHHHHHHHhCceEEEeecccCC
Confidence            4577778887654   55555533222  3344579999999999999865432    33344332 222  211     


Q ss_pred             -CCHHHHHHHHHHHHhcC
Q 027511           98 -PDPGDMVLAIRKAISLL  114 (222)
Q Consensus        98 -~~~~~la~~i~~ll~~~  114 (222)
                       -+.+++.+++++++.++
T Consensus       392 ~~~~e~v~~av~~vm~~~  409 (449)
T PLN02173        392 IAKREEIEFSIKEVMEGE  409 (449)
T ss_pred             cccHHHHHHHHHHHhcCC
Confidence             15799999999999764

>PLN03007 UDP-glucosyltransferase family protein

Probab=94.03  E-value=0.31  Score=44.11  Aligned_cols=80  Identities=19%  Similarity=0.122  Sum_probs=48.7

Q ss_pred             CcEEEeCCCChhHHHHHHHhccEEEEcCCCccccHHHHHHHHhCCcEEEeCCCC----ccccccC---CceEE-------
Q 027511           30 DRVEMLGAVPHAQVRSVLISGHIFLNSSLTEAFCIAILEAASCGLLTVSTRVGG----VPEVLPD---DMVVL-------   95 (222)
Q Consensus        30 ~~V~~~g~v~~~~~~~ll~~adv~v~~s~~E~~g~~ilEAma~G~PvVa~~~gg----~~e~i~~---~~~g~-------   95 (222)
                      .++...+|+|+.   ++|..+++..+-  +.+--++++||+++|+|+|+....+    ....+.+   -+.++       
T Consensus       345 ~g~~v~~w~PQ~---~iL~h~~v~~fv--tH~G~nS~~Eal~~GVP~v~~P~~~DQ~~na~~~~~~~~~G~~~~~~~~~~  419 (482)
T PLN03007        345 KGLIIRGWAPQV---LILDHQATGGFV--THCGWNSLLEGVAAGLPMVTWPVGAEQFYNEKLVTQVLRTGVSVGAKKLVK  419 (482)
T ss_pred             CCEEEecCCCHH---HHhccCccceee--ecCcchHHHHHHHcCCCeeeccchhhhhhhHHHHHHhhcceeEeccccccc
Confidence            356667777764   456665552222  3334578999999999999866432    2222211   11112       


Q ss_pred             -eCC--CHHHHHHHHHHHHhcC
Q 027511           96 -AEP--DPGDMVLAIRKAISLL  114 (222)
Q Consensus        96 -~~~--~~~~la~~i~~ll~~~  114 (222)
                       ..+  +.+++.+++++++.++
T Consensus       420 ~~~~~~~~~~l~~av~~~m~~~  441 (482)
T PLN03007        420 VKGDFISREKVEKAVREVIVGE  441 (482)
T ss_pred             cccCcccHHHHHHHHHHHhcCc
Confidence             112  6799999999999775

>TIGR02193 heptsyl_trn_I lipopolysaccharide heptosyltransferase I

Probab=93.72  E-value=1.2  Score=37.73  Aligned_cols=100  Identities=18%  Similarity=0.184  Sum_probs=61.0

Q ss_pred             ceEEEEEcCCcc-HHHHHHHHHHcCCCCcEEEeCCCChhHHHHHHHhccEEEEcCCCccccHHHHHHHHhCCcEEEeCCC
Q 027511            4 KVRFIVGGDGPK-RVRLEEMREKHSLQDRVEMLGAVPHAQVRSVLISGHIFLNSSLTEAFCIAILEAASCGLLTVSTRVG   82 (222)
Q Consensus         4 ~~~lvi~G~g~~-~~~l~~~~~~~~l~~~V~~~g~v~~~~~~~ll~~adv~v~~s~~E~~g~~ilEAma~G~PvVa~~~g   82 (222)
                      +.++++.|+++. ++..+++.+..+   +..+.|..+-.++..++++|+++|..-.     ..+-=|.|.|+|+|+--.+
T Consensus       211 ~~~~vl~~g~~~e~~~~~~i~~~~~---~~~l~g~~sL~el~ali~~a~l~I~~DS-----gp~HlAaa~g~P~i~lfg~  282 (319)
T TIGR02193       211 GLQIVLPWGNDAEKQRAERIAEALP---GAVVLPKMSLAEVAALLAGADAVVGVDT-----GLTHLAAALDKPTVTLYGA  282 (319)
T ss_pred             CCeEEEeCCCHHHHHHHHHHHhhCC---CCeecCCCCHHHHHHHHHcCCEEEeCCC-----hHHHHHHHcCCCEEEEECC
Confidence            467777754443 344555555433   2356788888999999999999996543     2556678999999974432


Q ss_pred             Cccccc-c--CCceEE-----eCCCHHHHHHHHHHHH
Q 027511           83 GVPEVL-P--DDMVVL-----AEPDPGDMVLAIRKAI  111 (222)
Q Consensus        83 g~~e~i-~--~~~~g~-----~~~~~~~la~~i~~ll  111 (222)
                      ..+... +  .....+     ..-+++++.+++.+++
T Consensus       283 t~p~~~~P~~~~~~~~~~~~~~~I~~~~V~~ai~~~~  319 (319)
T TIGR02193       283 TDPGRTGGYGKPNVALLGESGANPTPDEVLAALEELL  319 (319)
T ss_pred             CCHhhcccCCCCceEEccCccCCCCHHHHHHHHHhhC
Confidence            222211 1  111112     2226788888877653

This family consists of examples of ADP-heptose:LPS heptosyltransferase I, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria.

>PLN02555 limonoid glucosyltransferase

Probab=93.65  E-value=0.24  Score=44.80  Aligned_cols=80  Identities=19%  Similarity=0.071  Sum_probs=48.5

Q ss_pred             CcEEEeCCCChhHHHHHHHhccEEEEcCCCccccHHHHHHHHhCCcEEEeCCCC----ccccccCC-ceEEeC-------
Q 027511           30 DRVEMLGAVPHAQVRSVLISGHIFLNSSLTEAFCIAILEAASCGLLTVSTRVGG----VPEVLPDD-MVVLAE-------   97 (222)
Q Consensus        30 ~~V~~~g~v~~~~~~~ll~~adv~v~~s~~E~~g~~ilEAma~G~PvVa~~~gg----~~e~i~~~-~~g~~~-------   97 (222)
                      +++.+.+|+|+.++... .+..+||    +.+-.++++||+++|+|+|+...-+    ....+.+. +.|+..       
T Consensus       337 ~~g~v~~W~PQ~~iL~H-~~v~~Fv----tH~G~nS~~Eai~~GVP~l~~P~~~DQ~~Na~~~~~~~gvGv~l~~~~~~~  411 (480)
T PLN02555        337 DKGKIVQWCPQEKVLAH-PSVACFV----THCGWNSTMEALSSGVPVVCFPQWGDQVTDAVYLVDVFKTGVRLCRGEAEN  411 (480)
T ss_pred             CceEEEecCCHHHHhCC-CccCeEE----ecCCcchHHHHHHcCCCEEeCCCccccHHHHHHHHHHhCceEEccCCcccc
Confidence            45666677766542211 3344454    4444578999999999999765432    22233332 333222       


Q ss_pred             --CCHHHHHHHHHHHHhcC
Q 027511           98 --PDPGDMVLAIRKAISLL  114 (222)
Q Consensus        98 --~~~~~la~~i~~ll~~~  114 (222)
                        -+.+++.+++.+++.++
T Consensus       412 ~~v~~~~v~~~v~~vm~~~  430 (480)
T PLN02555        412 KLITREEVAECLLEATVGE  430 (480)
T ss_pred             CcCcHHHHHHHHHHHhcCc
Confidence              15689999999999754

>PLN02448 UDP-glycosyltransferase family protein

Probab=93.45  E-value=0.3  Score=43.93  Aligned_cols=78  Identities=14%  Similarity=0.092  Sum_probs=49.1

Q ss_pred             CcEEEeCCCChhHHHHHHHhccE--EEEcCCCccccHHHHHHHHhCCcEEEeCCCC----ccccccCC---ceEEe----
Q 027511           30 DRVEMLGAVPHAQVRSVLISGHI--FLNSSLTEAFCIAILEAASCGLLTVSTRVGG----VPEVLPDD---MVVLA----   96 (222)
Q Consensus        30 ~~V~~~g~v~~~~~~~ll~~adv--~v~~s~~E~~g~~ilEAma~G~PvVa~~~gg----~~e~i~~~---~~g~~----   96 (222)
                      +++.+.+++|+.+   +|...++  ||    +.+-.++++||+++|+|+|+-...+    ....+.+.   +.++.    
T Consensus       323 ~~~~v~~w~pQ~~---iL~h~~v~~fv----tHgG~nS~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~g~G~~~~~~~~  395 (459)
T PLN02448        323 DMGLVVPWCDQLK---VLCHSSVGGFW----THCGWNSTLEAVFAGVPMLTFPLFWDQPLNSKLIVEDWKIGWRVKREVG  395 (459)
T ss_pred             CCEEEeccCCHHH---HhccCccceEE----ecCchhHHHHHHHcCCCEEeccccccchhhHHHHHHHhCceEEEecccc
Confidence            3566667776554   3444444  43    4444578999999999999766543    33334332   22232    


Q ss_pred             ---CCCHHHHHHHHHHHHhcC
Q 027511           97 ---EPDPGDMVLAIRKAISLL  114 (222)
Q Consensus        97 ---~~~~~~la~~i~~ll~~~  114 (222)
                         ..+.+++.+++++++.++
T Consensus       396 ~~~~~~~~~l~~av~~vl~~~  416 (459)
T PLN02448        396 EETLVGREEIAELVKRFMDLE  416 (459)
T ss_pred             cCCcCcHHHHHHHHHHHhcCC
Confidence               126799999999999764

>PLN02764 glycosyltransferase family protein

Probab=93.41  E-value=0.41  Score=42.99  Aligned_cols=76  Identities=17%  Similarity=0.037  Sum_probs=49.0

Q ss_pred             EEEeCCCChhHHHHHHHhc--cEEEEcCCCccccHHHHHHHHhCCcEEEeCCCC----ccccccC-CceEEeC-------
Q 027511           32 VEMLGAVPHAQVRSVLISG--HIFLNSSLTEAFCIAILEAASCGLLTVSTRVGG----VPEVLPD-DMVVLAE-------   97 (222)
Q Consensus        32 V~~~g~v~~~~~~~ll~~a--dv~v~~s~~E~~g~~ilEAma~G~PvVa~~~gg----~~e~i~~-~~~g~~~-------   97 (222)
                      +...+|+|+.+   +|+..  .+||    +.+-.++++||+++|+|+|+....+    ....+.+ -+.|+..       
T Consensus       319 ~v~~~W~PQ~~---vL~h~~v~~Fv----tH~G~nS~~Eal~~GVP~l~~P~~~DQ~~na~~l~~~~g~gv~~~~~~~~~  391 (453)
T PLN02764        319 VVWGGWVQQPL---ILSHPSVGCFV----SHCGFGSMWESLLSDCQIVLVPQLGDQVLNTRLLSDELKVSVEVAREETGW  391 (453)
T ss_pred             cEEeCCCCHHH---HhcCcccCeEE----ecCCchHHHHHHHcCCCEEeCCcccchHHHHHHHHHHhceEEEeccccCCc
Confidence            44557777765   34443  3354    4455678999999999999866533    3334432 2333321       


Q ss_pred             CCHHHHHHHHHHHHhcC
Q 027511           98 PDPGDMVLAIRKAISLL  114 (222)
Q Consensus        98 ~~~~~la~~i~~ll~~~  114 (222)
                      -+.+++.+++++++.+.
T Consensus       392 ~~~e~i~~av~~vm~~~  408 (453)
T PLN02764        392 FSKESLRDAINSVMKRD  408 (453)
T ss_pred             cCHHHHHHHHHHHhcCC
Confidence            26799999999999764

>PLN02554 UDP-glycosyltransferase family protein

Probab=93.21  E-value=0.17  Score=45.73  Aligned_cols=76  Identities=18%  Similarity=0.160  Sum_probs=43.9

Q ss_pred             CcEEEeCCCChhHHHHHHH--hccEEEEcCCCccccHHHHHHHHhCCcEEEeCCCC----cc-ccccCCceEEe------
Q 027511           30 DRVEMLGAVPHAQVRSVLI--SGHIFLNSSLTEAFCIAILEAASCGLLTVSTRVGG----VP-EVLPDDMVVLA------   96 (222)
Q Consensus        30 ~~V~~~g~v~~~~~~~ll~--~adv~v~~s~~E~~g~~ilEAma~G~PvVa~~~gg----~~-e~i~~~~~g~~------   96 (222)
                      +|+.+.+|+|+.+   +|+  +..+||    +.+--++++||+.+|+|+|+....+    .. ..+..-+.|+.      
T Consensus       342 ~~g~v~~W~PQ~~---iL~H~~v~~Fv----tH~G~nS~~Ea~~~GVP~l~~P~~~DQ~~Na~~~v~~~g~Gv~l~~~~~  414 (481)
T PLN02554        342 DIGKVIGWAPQVA---VLAKPAIGGFV----THCGWNSILESLWFGVPMAAWPLYAEQKFNAFEMVEELGLAVEIRKYWR  414 (481)
T ss_pred             cCceEEeeCCHHH---HhCCcccCccc----ccCccchHHHHHHcCCCEEecCccccchhhHHHHHHHhCceEEeecccc
Confidence            3444556665543   332  223343    3344568999999999999865432    22 12222222221      


Q ss_pred             ---------CCCHHHHHHHHHHHHh
Q 027511           97 ---------EPDPGDMVLAIRKAIS  112 (222)
Q Consensus        97 ---------~~~~~~la~~i~~ll~  112 (222)
                               .-+.+++.++|++++.
T Consensus       415 ~~~~~~~~~~~~~e~l~~av~~vm~  439 (481)
T PLN02554        415 GDLLAGEMETVTAEEIERGIRCLME  439 (481)
T ss_pred             ccccccccCeEcHHHHHHHHHHHhc
Confidence                     1167899999999985

>PLN02208 glycosyltransferase family protein

Probab=93.19  E-value=0.39  Score=43.02  Aligned_cols=79  Identities=14%  Similarity=-0.049  Sum_probs=48.9

Q ss_pred             cEEEeCCCChhHHHHHHHhccEEEEcCCCccccHHHHHHHHhCCcEEEeCCCC----ccccccC-CceEEeC-------C
Q 027511           31 RVEMLGAVPHAQVRSVLISGHIFLNSSLTEAFCIAILEAASCGLLTVSTRVGG----VPEVLPD-DMVVLAE-------P   98 (222)
Q Consensus        31 ~V~~~g~v~~~~~~~ll~~adv~v~~s~~E~~g~~ilEAma~G~PvVa~~~gg----~~e~i~~-~~~g~~~-------~   98 (222)
                      ++.+.+|+|+.+   +|+...+..+-  +.+--++++||+++|+|+|+...-+    ....+.+ -+.|+..       -
T Consensus       312 g~~v~~W~PQ~~---iL~H~~v~~Fv--tHcG~nS~~Eai~~GVP~l~~P~~~DQ~~na~~~~~~~g~gv~~~~~~~~~~  386 (442)
T PLN02208        312 GVVWGGWVQQPL---ILDHPSIGCFV--NHCGPGTIWESLVSDCQMVLIPFLSDQVLFTRLMTEEFEVSVEVSREKTGWF  386 (442)
T ss_pred             CcEeeccCCHHH---HhcCCccCeEE--ccCCchHHHHHHHcCCCEEecCcchhhHHHHHHHHHHhceeEEeccccCCcC
Confidence            455667777665   44444442222  3344578999999999999865432    3333333 2333322       2


Q ss_pred             CHHHHHHHHHHHHhcC
Q 027511           99 DPGDMVLAIRKAISLL  114 (222)
Q Consensus        99 ~~~~la~~i~~ll~~~  114 (222)
                      +.+++.++|.++++++
T Consensus       387 ~~~~l~~ai~~~m~~~  402 (442)
T PLN02208        387 SKESLSNAIKSVMDKD  402 (442)
T ss_pred             cHHHHHHHHHHHhcCC
Confidence            6689999999999764

>PRK10916 ADP-heptose:LPS heptosyltransferase II; Provisional

Probab=92.93  E-value=0.62  Score=40.06  Aligned_cols=72  Identities=10%  Similarity=0.025  Sum_probs=51.9

Q ss_pred             ceEEEEEcCCccHHHHHHHHHHcCCC--Cc-EEEeCCCChhHHHHHHHhccEEEEcCCCccccHHHHHHHHhCCcEEEeC
Q 027511            4 KVRFIVGGDGPKRVRLEEMREKHSLQ--DR-VEMLGAVPHAQVRSVLISGHIFLNSSLTEAFCIAILEAASCGLLTVSTR   80 (222)
Q Consensus         4 ~~~lvi~G~g~~~~~l~~~~~~~~l~--~~-V~~~g~v~~~~~~~ll~~adv~v~~s~~E~~g~~ilEAma~G~PvVa~~   80 (222)
                      ++++++.|+..+++..++..+..+..  .+ +.+.|..+-.++..+++.|+++|..-.     ..+-=|.|.|+|+|+--
T Consensus       213 ~~~vvl~Gg~~e~~~~~~i~~~~~~~~~~~~~~l~g~~sL~el~ali~~a~l~I~nDT-----Gp~HlAaA~g~P~valf  287 (348)
T PRK10916        213 GYQVVLFGSAKDHEAGNEILAALNTEQQAWCRNLAGETQLEQAVILIAACKAIVTNDS-----GLMHVAAALNRPLVALY  287 (348)
T ss_pred             CCeEEEEeCHHhHHHHHHHHHhcccccccceeeccCCCCHHHHHHHHHhCCEEEecCC-----hHHHHHHHhCCCEEEEE
Confidence            56788888766666666665554321  12 456788888999999999999995443     25567889999999643

>TIGR02201 heptsyl_trn_III lipopolysaccharide heptosyltransferase III, putative

Probab=92.88  E-value=0.72  Score=39.55  Aligned_cols=72  Identities=11%  Similarity=0.165  Sum_probs=50.0

Q ss_pred             ceEEEEEcCCc--cHHHHHHHHHHcCCCCcEEEeCCCChhHHHHHHHhccEEEEcCCCccccHHHHHHHHhCCcEEEeC
Q 027511            4 KVRFIVGGDGP--KRVRLEEMREKHSLQDRVEMLGAVPHAQVRSVLISGHIFLNSSLTEAFCIAILEAASCGLLTVSTR   80 (222)
Q Consensus         4 ~~~lvi~G~g~--~~~~l~~~~~~~~l~~~V~~~g~v~~~~~~~ll~~adv~v~~s~~E~~g~~ilEAma~G~PvVa~~   80 (222)
                      +.++++.|+..  .++..++..+..+.+..+.+.|..+-.++..+++.|+++|....     ..+-=|.|.|+|+|+--
T Consensus       213 ~~~ivl~g~p~~~e~~~~~~i~~~~~~~~~~~l~g~~sL~el~ali~~a~l~Vs~DS-----Gp~HlAaA~g~p~v~Lf  286 (344)
T TIGR02201       213 GYEVVLTSGPDKDELAMVNEIAQGCQTPRVTSLAGKLTLPQLAALIDHARLFIGVDS-----VPMHMAAALGTPLVALF  286 (344)
T ss_pred             CCeEEEecCCCHHHHHHHHHHHhhCCCCcccccCCCCCHHHHHHHHHhCCEEEecCC-----HHHHHHHHcCCCEEEEE
Confidence            46788888543  22334555444443333557888889999999999999996532     35667889999999743

This family consists of examples of the putative ADP-heptose:LPS heptosyltransferase III, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria. This enzyme may be less widely distributed than heptosyltransferases I and II.

>PRK10422 lipopolysaccharide core biosynthesis protein; Provisional

Probab=92.75  E-value=0.75  Score=39.67  Aligned_cols=72  Identities=8%  Similarity=0.101  Sum_probs=49.3

Q ss_pred             ceEEEEEcCCcc--HHHHHHHHHHcCCCCcEEEeCCCChhHHHHHHHhccEEEEcCCCccccHHHHHHHHhCCcEEEeC
Q 027511            4 KVRFIVGGDGPK--RVRLEEMREKHSLQDRVEMLGAVPHAQVRSVLISGHIFLNSSLTEAFCIAILEAASCGLLTVSTR   80 (222)
Q Consensus         4 ~~~lvi~G~g~~--~~~l~~~~~~~~l~~~V~~~g~v~~~~~~~ll~~adv~v~~s~~E~~g~~ilEAma~G~PvVa~~   80 (222)
                      +.++++.|+...  .+..+++.+.......+.+.|..+-.++..+++.|+++|....     ..+-=|.|.|+|+|+--
T Consensus       215 ~~~vvl~ggp~e~e~~~~~~i~~~~~~~~~~~l~g~~sL~el~ali~~a~l~v~nDS-----Gp~HlAaA~g~P~v~lf  288 (352)
T PRK10422        215 GYEVVLTSGPDKDDLACVNEIAQGCQTPPVTALAGKTTFPELGALIDHAQLFIGVDS-----APAHIAAAVNTPLICLF  288 (352)
T ss_pred             CCeEEEEcCCChHHHHHHHHHHHhcCCCccccccCCCCHHHHHHHHHhCCEEEecCC-----HHHHHHHHcCCCEEEEE
Confidence            567788775322  2333455544333334567898899999999999999995443     35566889999999644

>TIGR02195 heptsyl_trn_II lipopolysaccharide heptosyltransferase II

Probab=92.75  E-value=0.74  Score=39.26  Aligned_cols=71  Identities=8%  Similarity=0.032  Sum_probs=51.5

Q ss_pred             ceEEEEEcCCccHHHHHHHHHHcCCCCcEEEeCCCChhHHHHHHHhccEEEEcCCCccccHHHHHHHHhCCcEEEeC
Q 027511            4 KVRFIVGGDGPKRVRLEEMREKHSLQDRVEMLGAVPHAQVRSVLISGHIFLNSSLTEAFCIAILEAASCGLLTVSTR   80 (222)
Q Consensus         4 ~~~lvi~G~g~~~~~l~~~~~~~~l~~~V~~~g~v~~~~~~~ll~~adv~v~~s~~E~~g~~ilEAma~G~PvVa~~   80 (222)
                      +.++++.|+..+++..+++.+..+ ...+-+.|..+-.++..+++.||++|..-.     ..+-=|.|.|+|+|+--
T Consensus       207 ~~~ivl~G~~~e~~~~~~i~~~~~-~~~~~l~g~~sL~el~ali~~a~l~I~~DS-----Gp~HlAaA~~~P~i~lf  277 (334)
T TIGR02195       207 GYQVVLFGSAKDHPAGNEIEALLP-GELRNLAGETSLDEAVDLIALAKAVVTNDS-----GLMHVAAALNRPLVALY  277 (334)
T ss_pred             CCEEEEEEChhhHHHHHHHHHhCC-cccccCCCCCCHHHHHHHHHhCCEEEeeCC-----HHHHHHHHcCCCEEEEE
Confidence            467888887766666666655432 122346788888999999999999996543     25566889999999643

This family consists of examples of ADP-heptose:LPS heptosyltransferase II, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria.

>PLN02210 UDP-glucosyl transferase

Probab=92.62  E-value=0.44  Score=42.90  Aligned_cols=77  Identities=14%  Similarity=0.043  Sum_probs=48.1

Q ss_pred             cEEEeCCCChhHHHHHHHhcc--EEEEcCCCccccHHHHHHHHhCCcEEEeCCCC----ccccccC-CceEEeC------
Q 027511           31 RVEMLGAVPHAQVRSVLISGH--IFLNSSLTEAFCIAILEAASCGLLTVSTRVGG----VPEVLPD-DMVVLAE------   97 (222)
Q Consensus        31 ~V~~~g~v~~~~~~~ll~~ad--v~v~~s~~E~~g~~ilEAma~G~PvVa~~~gg----~~e~i~~-~~~g~~~------   97 (222)
                      +..+.+++|+.+   +|+.+.  +||    +.+--++++||+++|+|+|+-...+    ....+.+ -+.|+..      
T Consensus       325 ~g~v~~w~PQ~~---iL~h~~vg~Fi----tH~G~nS~~Eai~~GVP~v~~P~~~DQ~~na~~~~~~~g~G~~l~~~~~~  397 (456)
T PLN02210        325 QGVVLEWSPQEK---ILSHMAISCFV----THCGWNSTIETVVAGVPVVAYPSWTDQPIDARLLVDVFGIGVRMRNDAVD  397 (456)
T ss_pred             CeEEEecCCHHH---HhcCcCcCeEE----eeCCcccHHHHHHcCCCEEecccccccHHHHHHHHHHhCeEEEEeccccC
Confidence            344567777654   566665  444    3333468899999999999865532    3333333 2333221      


Q ss_pred             --CCHHHHHHHHHHHHhcC
Q 027511           98 --PDPGDMVLAIRKAISLL  114 (222)
Q Consensus        98 --~~~~~la~~i~~ll~~~  114 (222)
                        -+.+++.+++++++.++
T Consensus       398 ~~~~~~~l~~av~~~m~~~  416 (456)
T PLN02210        398 GELKVEEVERCIEAVTEGP  416 (456)
T ss_pred             CcCCHHHHHHHHHHHhcCc
Confidence              26789999999999763

>PLN02863 UDP-glucoronosyl/UDP-glucosyl transferase family protein

Probab=92.60  E-value=0.56  Score=42.45  Aligned_cols=75  Identities=20%  Similarity=0.285  Sum_probs=45.6

Q ss_pred             cEEEeCCCChhHHHHHHHh--ccEEEEcCCCccccHHHHHHHHhCCcEEEeCCC----CccccccCC-ceEEeC------
Q 027511           31 RVEMLGAVPHAQVRSVLIS--GHIFLNSSLTEAFCIAILEAASCGLLTVSTRVG----GVPEVLPDD-MVVLAE------   97 (222)
Q Consensus        31 ~V~~~g~v~~~~~~~ll~~--adv~v~~s~~E~~g~~ilEAma~G~PvVa~~~g----g~~e~i~~~-~~g~~~------   97 (222)
                      ++.+.+|+|+.+   +|..  ..+||    +.+-.++++||+++|+|+|+....    .....+.+. +.|+..      
T Consensus       344 g~~v~~w~PQ~~---vL~h~~v~~fv----tH~G~nS~~Eal~~GvP~l~~P~~~DQ~~na~~v~~~~gvG~~~~~~~~~  416 (477)
T PLN02863        344 GLVIRGWAPQVA---ILSHRAVGAFL----THCGWNSVLEGLVAGVPMLAWPMAADQFVNASLLVDELKVAVRVCEGADT  416 (477)
T ss_pred             CEEecCCCCHHH---HhcCCCcCeEE----ecCCchHHHHHHHcCCCEEeCCccccchhhHHHHHHhhceeEEeccCCCC
Confidence            466667777643   4544  34454    344456899999999999975542    233333222 333221      


Q ss_pred             -CCHHHHHHHHHHHHh
Q 027511           98 -PDPGDMVLAIRKAIS  112 (222)
Q Consensus        98 -~~~~~la~~i~~ll~  112 (222)
                       .+.+++.+++.+++.
T Consensus       417 ~~~~~~v~~~v~~~m~  432 (477)
T PLN02863        417 VPDSDELARVFMESVS  432 (477)
T ss_pred             CcCHHHHHHHHHHHhh
Confidence             156888888888773

>PLN02207 UDP-glycosyltransferase

Probab=92.59  E-value=0.34  Score=43.69  Aligned_cols=76  Identities=16%  Similarity=0.182  Sum_probs=45.6

Q ss_pred             CcEEEeCCCChhHHHHHHHhccE--EEEcCCCccccHHHHHHHHhCCcEEEeCCCC----ccccccC-CceEEe------
Q 027511           30 DRVEMLGAVPHAQVRSVLISGHI--FLNSSLTEAFCIAILEAASCGLLTVSTRVGG----VPEVLPD-DMVVLA------   96 (222)
Q Consensus        30 ~~V~~~g~v~~~~~~~ll~~adv--~v~~s~~E~~g~~ilEAma~G~PvVa~~~gg----~~e~i~~-~~~g~~------   96 (222)
                      +++.+.+|+|+.++   |+...+  ||    +.+--++++||+++|+|+|+....+    ...++.+ -+.|+.      
T Consensus       332 ~~g~i~~W~PQ~~I---L~H~~vg~Fv----TH~GwnS~~Eai~~GVP~l~~P~~~DQ~~Na~~~~~~~gvGv~~~~~~~  404 (468)
T PLN02207        332 GRGMICGWSPQVEI---LAHKAVGGFV----SHCGWNSIVESLWFGVPIVTWPMYAEQQLNAFLMVKELKLAVELKLDYR  404 (468)
T ss_pred             CCeEEEEeCCHHHH---hcccccceee----ecCccccHHHHHHcCCCEEecCccccchhhHHHHHHHhCceEEEecccc
Confidence            44555677766553   333333  43    3333468899999999999765432    3333222 233331      


Q ss_pred             -----CCCHHHHHHHHHHHHh
Q 027511           97 -----EPDPGDMVLAIRKAIS  112 (222)
Q Consensus        97 -----~~~~~~la~~i~~ll~  112 (222)
                           .-+.+++.++|++++.
T Consensus       405 ~~~~~~v~~e~i~~av~~vm~  425 (468)
T PLN02207        405 VHSDEIVNANEIETAIRCVMN  425 (468)
T ss_pred             cccCCcccHHHHHHHHHHHHh
Confidence                 1156899999999996

>PLN00414 glycosyltransferase family protein

Probab=92.51  E-value=0.49  Score=42.46  Aligned_cols=76  Identities=11%  Similarity=-0.003  Sum_probs=48.5

Q ss_pred             EEEeCCCChhHHHHHHHhc--cEEEEcCCCccccHHHHHHHHhCCcEEEeCCC----Ccccccc-CCceEEeC-------
Q 027511           32 VEMLGAVPHAQVRSVLISG--HIFLNSSLTEAFCIAILEAASCGLLTVSTRVG----GVPEVLP-DDMVVLAE-------   97 (222)
Q Consensus        32 V~~~g~v~~~~~~~ll~~a--dv~v~~s~~E~~g~~ilEAma~G~PvVa~~~g----g~~e~i~-~~~~g~~~-------   97 (222)
                      ..+.+|+|+.+   +|+..  +.||    +.+-.++++||+++|+|+|+....    .....+. .-+.|+..       
T Consensus       314 ~vv~~w~PQ~~---vL~h~~v~~fv----tH~G~nS~~Ea~~~GvP~l~~P~~~dQ~~na~~~~~~~g~g~~~~~~~~~~  386 (446)
T PLN00414        314 IVWEGWVEQPL---ILSHPSVGCFV----NHCGFGSMWESLVSDCQIVFIPQLADQVLITRLLTEELEVSVKVQREDSGW  386 (446)
T ss_pred             eEEeccCCHHH---HhcCCccceEE----ecCchhHHHHHHHcCCCEEecCcccchHHHHHHHHHHhCeEEEeccccCCc
Confidence            44557777665   44444  3454    444567899999999999986543    2333442 22333221       


Q ss_pred             CCHHHHHHHHHHHHhcC
Q 027511           98 PDPGDMVLAIRKAISLL  114 (222)
Q Consensus        98 ~~~~~la~~i~~ll~~~  114 (222)
                      -+.+++.+++++++.++
T Consensus       387 ~~~~~i~~~v~~~m~~~  403 (446)
T PLN00414        387 FSKESLRDTVKSVMDKD  403 (446)
T ss_pred             cCHHHHHHHHHHHhcCC
Confidence            26799999999999764

>PLN02152 indole-3-acetate beta-glucosyltransferase

Probab=92.48  E-value=0.37  Score=43.33  Aligned_cols=80  Identities=14%  Similarity=0.095  Sum_probs=50.0

Q ss_pred             CCcEEEeCCCChhHHHHHHHhccEEEEcCCCccccHHHHHHHHhCCcEEEeCCC----CccccccC---CceEEe---C-
Q 027511           29 QDRVEMLGAVPHAQVRSVLISGHIFLNSSLTEAFCIAILEAASCGLLTVSTRVG----GVPEVLPD---DMVVLA---E-   97 (222)
Q Consensus        29 ~~~V~~~g~v~~~~~~~ll~~adv~v~~s~~E~~g~~ilEAma~G~PvVa~~~g----g~~e~i~~---~~~g~~---~-   97 (222)
                      .++..+.+|+|+.+   +|....+..+-  +.+-.++++||+.+|+|+|+-...    .....+.+   .+.++.   . 
T Consensus       326 ~~~g~v~~W~PQ~~---iL~h~~vg~fv--tH~G~nS~~Ea~~~GvP~l~~P~~~DQ~~na~~~~~~~~~G~~~~~~~~~  400 (455)
T PLN02152        326 EEVGMIVSWCSQIE---VLRHRAVGCFV--THCGWSSSLESLVLGVPVVAFPMWSDQPANAKLLEEIWKTGVRVRENSEG  400 (455)
T ss_pred             cCCeEEEeeCCHHH---HhCCcccceEE--eeCCcccHHHHHHcCCCEEeccccccchHHHHHHHHHhCceEEeecCcCC
Confidence            35666678887654   55566553322  334456889999999999976542    23333333   122232   1 


Q ss_pred             -CCHHHHHHHHHHHHhc
Q 027511           98 -PDPGDMVLAIRKAISL  113 (222)
Q Consensus        98 -~~~~~la~~i~~ll~~  113 (222)
                       -+.+++.+++.+++++
T Consensus       401 ~~~~e~l~~av~~vm~~  417 (455)
T PLN02152        401 LVERGEIRRCLEAVMEE  417 (455)
T ss_pred             cCcHHHHHHHHHHHHhh
Confidence             1679999999999975

>PF04464 Glyphos_transf: CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase ; InterPro: IPR007554 Wall-associated teichoic acids are a heterogeneous class of phosphate-rich polymers that are covalently linked to the cell wall peptidoglycan of Gram-positive bacteria

Probab=92.42  E-value=0.54  Score=40.73  Aligned_cols=80  Identities=10%  Similarity=0.074  Sum_probs=48.7

Q ss_pred             CCCcEEEeCCCChhHHHHHHHhccEEEEcCCCccccHHHHHHHHhCCcEEE--eCCC-------CccccccCCceEEeCC
Q 027511           28 LQDRVEMLGAVPHAQVRSVLISGHIFLNSSLTEAFCIAILEAASCGLLTVS--TRVG-------GVPEVLPDDMVVLAEP   98 (222)
Q Consensus        28 l~~~V~~~g~v~~~~~~~ll~~adv~v~~s~~E~~g~~ilEAma~G~PvVa--~~~g-------g~~e~i~~~~~g~~~~   98 (222)
                      ..++|.+...  ..++.+++..||++|    ++- +.+++|++.+++|||-  .|..       ...+ ..+...|-...
T Consensus       250 ~~~~i~~~~~--~~~~~~ll~~aDiLI----TDy-SSi~fD~~~l~KPiify~~D~~~Y~~~rg~~~~-~~~~~pg~~~~  321 (369)
T PF04464_consen  250 DNSNIIFVSD--NEDIYDLLAAADILI----TDY-SSIIFDFLLLNKPIIFYQPDLEEYEKERGFYFD-YEEDLPGPIVY  321 (369)
T ss_dssp             -TTTEEE-TT---S-HHHHHHT-SEEE----ESS--THHHHHGGGT--EEEE-TTTTTTTTTSSBSS--TTTSSSS-EES
T ss_pred             cCCcEEECCC--CCCHHHHHHhcCEEE----Eec-hhHHHHHHHhCCCEEEEeccHHHHhhccCCCCc-hHhhCCCceeC
Confidence            3456777665  458999999999998    443 4488999999999994  3432       1222 12223344456


Q ss_pred             CHHHHHHHHHHHHhcCC
Q 027511           99 DPGDMVLAIRKAISLLP  115 (222)
Q Consensus        99 ~~~~la~~i~~ll~~~~  115 (222)
                      +.++|.++|..++++..
T Consensus       322 ~~~eL~~~i~~~~~~~~  338 (369)
T PF04464_consen  322 NFEELIEAIENIIENPD  338 (369)
T ss_dssp             SHHHHHHHHTTHHHHHH
T ss_pred             CHHHHHHHHHhhhhCCH
Confidence            88999999999887643

They consist of a main chain of phosphodiester-linked polyols and/or sugar moieties attached to peptidoglycan via a linkage unit. CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase is responsible for the polymerisation of the main chain of the teichoic acid by sequential transfer of glycerol-phosphate units from CDP-glycerol to the linkage unit lipid [].; GO: 0047355 CDP-glycerol glycerophosphotransferase activity, 0016020 membrane; PDB: 3L7K_B 3L7L_D 3L7I_A 3L7J_D 3L7M_D.

>PF04007 DUF354: Protein of unknown function (DUF354); InterPro: IPR007152 Members of this family are around 350 amino acids in length

Probab=91.92  E-value=2.2  Score=36.86  Aligned_cols=64  Identities=22%  Similarity=0.246  Sum_probs=43.2

Q ss_pred             HHHHhccEEEEcCCCccccHHHHHHHHhCCcEEEeCCCC---ccccccCCceEEeCCCHHHHHHHHHHHHhc
Q 027511           45 SVLISGHIFLNSSLTEAFCIAILEAASCGLLTVSTRVGG---VPEVLPDDMVVLAEPDPGDMVLAIRKAISL  113 (222)
Q Consensus        45 ~ll~~adv~v~~s~~E~~g~~ilEAma~G~PvVa~~~gg---~~e~i~~~~~g~~~~~~~~la~~i~~ll~~  113 (222)
                      +++.-||++|     .+.|+-..||+..|+|.|++..|-   ..+++.+.+..+-..|++++.+.+.+....
T Consensus       244 ~Ll~~a~l~I-----g~ggTMa~EAA~LGtPaIs~~~g~~~~vd~~L~~~Gll~~~~~~~ei~~~v~~~~~~  310 (335)
T PF04007_consen  244 DLLYYADLVI-----GGGGTMAREAALLGTPAISCFPGKLLAVDKYLIEKGLLYHSTDPDEIVEYVRKNLGK  310 (335)
T ss_pred             HHHHhcCEEE-----eCCcHHHHHHHHhCCCEEEecCCcchhHHHHHHHCCCeEecCCHHHHHHHHHHhhhc
Confidence            4555555555     233567789999999999987653   334444554567778999998866665543

They are found in archaea and some bacteria and have no known function.

>PLN02992 coniferyl-alcohol glucosyltransferase

Probab=91.85  E-value=0.73  Score=41.77  Aligned_cols=79  Identities=13%  Similarity=0.045  Sum_probs=51.5

Q ss_pred             cEEEeCCCChhHHHHHHHhccEEEEcCCCccccHHHHHHHHhCCcEEEeCCCC----cccccc-CCceEEeC------CC
Q 027511           31 RVEMLGAVPHAQVRSVLISGHIFLNSSLTEAFCIAILEAASCGLLTVSTRVGG----VPEVLP-DDMVVLAE------PD   99 (222)
Q Consensus        31 ~V~~~g~v~~~~~~~ll~~adv~v~~s~~E~~g~~ilEAma~G~PvVa~~~gg----~~e~i~-~~~~g~~~------~~   99 (222)
                      ++.+.+|+|+.+   +|....+..+-  +.+-.++++||+.+|+|+|+....+    ....+. .-+.|+..      -+
T Consensus       339 g~vv~~W~PQ~~---iL~h~~vg~Fi--tH~G~nS~~Eal~~GVP~l~~P~~~DQ~~na~~~~~~~g~gv~~~~~~~~~~  413 (481)
T PLN02992        339 GFVVPSWAPQAE---ILAHQAVGGFL--THCGWSSTLESVVGGVPMIAWPLFAEQNMNAALLSDELGIAVRSDDPKEVIS  413 (481)
T ss_pred             CEEEeecCCHHH---HhCCcccCeeE--ecCchhHHHHHHHcCCCEEecCccchhHHHHHHHHHHhCeeEEecCCCCccc
Confidence            578889998775   45555552221  4444578999999999999866532    333442 32333221      16


Q ss_pred             HHHHHHHHHHHHhcC
Q 027511          100 PGDMVLAIRKAISLL  114 (222)
Q Consensus       100 ~~~la~~i~~ll~~~  114 (222)
                      .+++.++|.+++.++
T Consensus       414 ~~~l~~av~~vm~~~  428 (481)
T PLN02992        414 RSKIEALVRKVMVEE  428 (481)
T ss_pred             HHHHHHHHHHHhcCC
Confidence            689999999999764

>PRK10964 ADP-heptose:LPS heptosyl transferase I; Provisional

Probab=91.46  E-value=2.6  Score=35.76  Aligned_cols=70  Identities=17%  Similarity=0.123  Sum_probs=48.6

Q ss_pred             ceEEEEE-cCCccHHHHHHHHHHcCCCCcEEEeCCCChhHHHHHHHhccEEEEcCCCccccHHHHHHHHhCCcEEEeCC
Q 027511            4 KVRFIVG-GDGPKRVRLEEMREKHSLQDRVEMLGAVPHAQVRSVLISGHIFLNSSLTEAFCIAILEAASCGLLTVSTRV   81 (222)
Q Consensus         4 ~~~lvi~-G~g~~~~~l~~~~~~~~l~~~V~~~g~v~~~~~~~ll~~adv~v~~s~~E~~g~~ilEAma~G~PvVa~~~   81 (222)
                      +.++++. |...+++..+++.+..   .++.+.|..+-.++..+++.||++|....     ..+-=|.|+|+|+|+--.
T Consensus       210 ~~~ivl~~G~~~e~~~~~~i~~~~---~~~~l~g~~sL~elaali~~a~l~I~nDS-----Gp~HlA~A~g~p~valfG  280 (322)
T PRK10964        210 GLRIKLPWGAEHEEQRAKRLAEGF---PYVEVLPKLSLEQVARVLAGAKAVVSVDT-----GLSHLTAALDRPNITLYG  280 (322)
T ss_pred             CCeEEEeCCCHHHHHHHHHHHccC---CcceecCCCCHHHHHHHHHhCCEEEecCC-----cHHHHHHHhCCCEEEEEC
Confidence            4567775 5434444555554422   34667788899999999999999996543     255678899999996443

>COG4671 Predicted glycosyl transferase [General function prediction only]

Probab=91.16  E-value=2.7  Score=36.42  Aligned_cols=103  Identities=15%  Similarity=0.175  Sum_probs=60.1

Q ss_pred             EEEEcCCccHHHHHHHHHHcCCCCcEEEeCCCChhHHHHHHHhccEEEEcCCCccccHHHHHHHHhCCcEEEeCCCCccc
Q 027511            7 FIVGGDGPKRVRLEEMREKHSLQDRVEMLGAVPHAQVRSVLISGHIFLNSSLTEAFCIAILEAASCGLLTVSTRVGGVPE   86 (222)
Q Consensus         7 lvi~G~g~~~~~l~~~~~~~~l~~~V~~~g~v~~~~~~~ll~~adv~v~~s~~E~~g~~ilEAma~G~PvVa~~~gg~~e   86 (222)
                      +++.|......+..++.......++|.+..+  .+++..++..|+..|.-+-+    ++..|-+++|+|.+.-..+...|
T Consensus       254 ~ivtGP~MP~~~r~~l~~~A~~~p~i~I~~f--~~~~~~ll~gA~~vVSm~GY----NTvCeILs~~k~aLivPr~~p~e  327 (400)
T COG4671         254 LIVTGPFMPEAQRQKLLASAPKRPHISIFEF--RNDFESLLAGARLVVSMGGY----NTVCEILSFGKPALIVPRAAPRE  327 (400)
T ss_pred             EEEeCCCCCHHHHHHHHHhcccCCCeEEEEh--hhhHHHHHHhhheeeecccc----hhhhHHHhCCCceEEeccCCCcH
Confidence            4444544444444444444443445666666  46666777777776654433    35569999999998665544433


Q ss_pred             -cc-cC------CceEEeCC---CHHHHHHHHHHHHhcCC
Q 027511           87 -VL-PD------DMVVLAEP---DPGDMVLAIRKAISLLP  115 (222)
Q Consensus        87 -~i-~~------~~~g~~~~---~~~~la~~i~~ll~~~~  115 (222)
                       .+ ..      |-..+..|   +++.++++|..++..|.
T Consensus       328 EQliRA~Rl~~LGL~dvL~pe~lt~~~La~al~~~l~~P~  367 (400)
T COG4671         328 EQLIRAQRLEELGLVDVLLPENLTPQNLADALKAALARPS  367 (400)
T ss_pred             HHHHHHHHHHhcCcceeeCcccCChHHHHHHHHhcccCCC
Confidence             11 11      11123333   67999999999998654

>PRK10017 colanic acid biosynthesis protein; Provisional

Probab=90.95  E-value=4.1  Score=36.38  Aligned_cols=95  Identities=13%  Similarity=0.204  Sum_probs=60.0

Q ss_pred             HHHHHHHHHHcCCCCcEEE-eCCCChhHHHHHHHhccEEEEcCCCccccHHHHHHHHhCCcEEEeCCC----CccccccC
Q 027511           16 RVRLEEMREKHSLQDRVEM-LGAVPHAQVRSVLISGHIFLNSSLTEAFCIAILEAASCGLLTVSTRVG----GVPEVLPD   90 (222)
Q Consensus        16 ~~~l~~~~~~~~l~~~V~~-~g~v~~~~~~~ll~~adv~v~~s~~E~~g~~ilEAma~G~PvVa~~~g----g~~e~i~~   90 (222)
                      +...+++.+.+.-++++++ .+..+..++..+++++|++|..-.+     +++=|++.|+|+|+-...    ++-+.+.-
T Consensus       293 ~~~~~~l~~~~~~~~~~~vi~~~~~~~e~~~iIs~~dl~ig~RlH-----a~I~a~~~gvP~i~i~Y~~K~~~~~~~lg~  367 (426)
T PRK10017        293 RMVALNLRQHVSDPARYHVVMDELNDLEMGKILGACELTVGTRLH-----SAIISMNFGTPAIAINYEHKSAGIMQQLGL  367 (426)
T ss_pred             HHHHHHHHHhcccccceeEecCCCChHHHHHHHhhCCEEEEecch-----HHHHHHHcCCCEEEeeehHHHHHHHHHcCC
Confidence            3344556666554444443 4445567888999999998865443     567899999999975542    23333322


Q ss_pred             CceEE-eC-CCHHHHHHHHHHHHhcCC
Q 027511           91 DMVVL-AE-PDPGDMVLAIRKAISLLP  115 (222)
Q Consensus        91 ~~~g~-~~-~~~~~la~~i~~ll~~~~  115 (222)
                      ..... .. -+++++.+.+.+++++.+
T Consensus       368 ~~~~~~~~~l~~~~Li~~v~~~~~~r~  394 (426)
T PRK10017        368 PEMAIDIRHLLDGSLQAMVADTLGQLP  394 (426)
T ss_pred             ccEEechhhCCHHHHHHHHHHHHhCHH
Confidence            22211 12 267899999999998754

>PLN02167 UDP-glycosyltransferase family protein

Probab=90.79  E-value=0.83  Score=41.32  Aligned_cols=52  Identities=10%  Similarity=-0.006  Sum_probs=33.4

Q ss_pred             ccHHHHHHHHhCCcEEEeCCCC----cccc-ccCCceEEeC-----------CCHHHHHHHHHHHHhc
Q 027511           62 FCIAILEAASCGLLTVSTRVGG----VPEV-LPDDMVVLAE-----------PDPGDMVLAIRKAISL  113 (222)
Q Consensus        62 ~g~~ilEAma~G~PvVa~~~gg----~~e~-i~~~~~g~~~-----------~~~~~la~~i~~ll~~  113 (222)
                      --++++||+++|+|+|+....+    .... +..-+.|+..           -+.+++++++.+++.+
T Consensus       367 G~nS~~Eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~g~~~~~~~~~~~~~~~~~~~l~~av~~~m~~  434 (475)
T PLN02167        367 GWNSVLESLWFGVPIATWPMYAEQQLNAFTMVKELGLAVELRLDYVSAYGEIVKADEIAGAVRSLMDG  434 (475)
T ss_pred             CcccHHHHHHcCCCEEeccccccchhhHHHHHHHhCeeEEeecccccccCCcccHHHHHHHHHHHhcC
Confidence            3458899999999999765432    2212 2222333211           1578999999999865

>PRK01021 lpxB lipid-A-disaccharide synthase; Reviewed

Probab=90.07  E-value=3.4  Score=38.47  Aligned_cols=69  Identities=14%  Similarity=0.103  Sum_probs=42.7

Q ss_pred             CceEEEEEcCCcc-HHHHHHHHHHcCCCCcEEEeCCCChhHHHHHHHhccEEEEcCCCccccHHHHHHHHhCCcEEEeC
Q 027511            3 VKVRFIVGGDGPK-RVRLEEMREKHSLQDRVEMLGAVPHAQVRSVLISGHIFLNSSLTEAFCIAILEAASCGLLTVSTR   80 (222)
Q Consensus         3 p~~~lvi~G~g~~-~~~l~~~~~~~~l~~~V~~~g~v~~~~~~~ll~~adv~v~~s~~E~~g~~ilEAma~G~PvVa~~   80 (222)
                      ++.++++....+. ++.+++..++.+. -.+.+...   ++-.+++++||+.+.+|     |++-+|++.+|+|.|..-
T Consensus       445 ~~l~fvvp~a~~~~~~~i~~~~~~~~~-~~~~ii~~---~~~~~~m~aaD~aLaaS-----GTaTLEaAL~g~PmVV~Y  514 (608)
T PRK01021        445 STHQLLVSSANPKYDHLILEVLQQEGC-LHSHIVPS---QFRYELMRECDCALAKC-----GTIVLETALNQTPTIVTC  514 (608)
T ss_pred             cCeEEEEecCchhhHHHHHHHHhhcCC-CCeEEecC---cchHHHHHhcCeeeecC-----CHHHHHHHHhCCCEEEEE
Confidence            3566766543322 3555555543331 02333321   12368999999988765     789999999999999643

>COG3980 spsG Spore coat polysaccharide biosynthesis protein, predicted glycosyltransferase [Cell envelope biogenesis, outer membrane]

Probab=89.88  E-value=1.5  Score=36.89  Aligned_cols=54  Identities=13%  Similarity=0.190  Sum_probs=39.5

Q ss_pred             CccHHHHHHHHHHcCCCCcEEEeCCCChhHHHHHHHhccEEEEcCCCccccHHHHHHHHhCCcE
Q 027511           13 GPKRVRLEEMREKHSLQDRVEMLGAVPHAQVRSVLISGHIFLNSSLTEAFCIAILEAASCGLLT   76 (222)
Q Consensus        13 g~~~~~l~~~~~~~~l~~~V~~~g~v~~~~~~~ll~~adv~v~~s~~E~~g~~ilEAma~G~Pv   76 (222)
                      .|....+...++++   +++.++-.  .+++..+|..||+.+..     -|.++.||...|+|.
T Consensus       196 ~p~l~~l~k~~~~~---~~i~~~~~--~~dma~LMke~d~aI~A-----aGstlyEa~~lgvP~  249 (318)
T COG3980         196 NPTLKNLRKRAEKY---PNINLYID--TNDMAELMKEADLAISA-----AGSTLYEALLLGVPS  249 (318)
T ss_pred             CcchhHHHHHHhhC---CCeeeEec--chhHHHHHHhcchheec-----cchHHHHHHHhcCCc
Confidence            34445555555543   56766554  58899999999998743     478999999999993

>COG0859 RfaF ADP-heptose:LPS heptosyltransferase [Cell envelope biogenesis, outer membrane]

Probab=89.67  E-value=1.9  Score=37.05  Aligned_cols=70  Identities=14%  Similarity=0.167  Sum_probs=53.0

Q ss_pred             eEEEEEcCCccHHHHHHHHHHcCCCCcEEEeCCCChhHHHHHHHhccEEEEcCCCccccHHHHHHHHhCCcEEEeCC
Q 027511            5 VRFIVGGDGPKRVRLEEMREKHSLQDRVEMLGAVPHAQVRSVLISGHIFLNSSLTEAFCIAILEAASCGLLTVSTRV   81 (222)
Q Consensus         5 ~~lvi~G~g~~~~~l~~~~~~~~l~~~V~~~g~v~~~~~~~ll~~adv~v~~s~~E~~g~~ilEAma~G~PvVa~~~   81 (222)
                      .++++.|+..+.+..+++.+.+..  .+.+.|..+-.++..++..||++|.+..     ..+-=|.|.|+|+|+--.
T Consensus       209 ~~Vvl~g~~~e~e~~~~i~~~~~~--~~~l~~k~sL~e~~~li~~a~l~I~~DS-----g~~HlAaA~~~P~I~iyg  278 (334)
T COG0859         209 YQVVLFGGPDEEERAEEIAKGLPN--AVILAGKTSLEELAALIAGADLVIGNDS-----GPMHLAAALGTPTIALYG  278 (334)
T ss_pred             CEEEEecChHHHHHHHHHHHhcCC--ccccCCCCCHHHHHHHHhcCCEEEccCC-----hHHHHHHHcCCCEEEEEC
Confidence            578888877666677777776543  2338899999999999999999886544     245568899999997543

>PF01075 Glyco_transf_9: Glycosyltransferase family 9 (heptosyltransferase); InterPro: IPR002201 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases

Probab=89.42  E-value=2.3  Score=34.36  Aligned_cols=70  Identities=11%  Similarity=0.154  Sum_probs=44.3

Q ss_pred             eEEEEEcCCcc--HHHHHHHHHHcCCCCcEEEeCCCChhHHHHHHHhccEEEEcCCCccccHHHHHHHHhCCcEEEeC
Q 027511            5 VRFIVGGDGPK--RVRLEEMREKHSLQDRVEMLGAVPHAQVRSVLISGHIFLNSSLTEAFCIAILEAASCGLLTVSTR   80 (222)
Q Consensus         5 ~~lvi~G~g~~--~~~l~~~~~~~~l~~~V~~~g~v~~~~~~~ll~~adv~v~~s~~E~~g~~ilEAma~G~PvVa~~   80 (222)
                      .++++.|...+  .+..+++.+.... ..+.+.|..+-.++..+++.||++|.+-.     ..+-=|.|.|+|+|+--
T Consensus       138 ~~vvl~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~e~~ali~~a~~~I~~Dt-----g~~HlA~a~~~p~v~lf  209 (247)
T PF01075_consen  138 YRVVLLGGPEEQEKEIADQIAAGLQN-PVINLAGKTSLRELAALISRADLVIGNDT-----GPMHLAAALGTPTVALF  209 (247)
T ss_dssp             -EEEE--SSHHHHHHHHHHHHTTHTT-TTEEETTTS-HHHHHHHHHTSSEEEEESS-----HHHHHHHHTT--EEEEE
T ss_pred             ceEEEEccchHHHHHHHHHHHHhccc-ceEeecCCCCHHHHHHHHhcCCEEEecCC-----hHHHHHHHHhCCEEEEe
Confidence            57888887655  2333334333221 25788898899999999999999996543     35566889999999753

These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 9 GT9 from CAZY comprises enzymes with two known activity; lipopolysaccharide N-acetylglucosaminyltransferase (2.4.1.56 from EC), heptosyltransferase (2.4 from EC). Heptosyltransferase I is thought to add L-glycero-D-manno-heptose to the inner 3-deoxy-D-manno-octulosonic acid (Kdo) residue of the lipopolysaccharide core []. Heptosyltransferase II is a glycosyltransferase involved in the synthesis of the inner core region of lipopolysaccharide []. Lipopolysaccharide is a major component of the outer leaflet of the outer membrane in Gram-negative bacteria. It is composed of three domains; lipid A, Core oligosaccharide and the O-antigen. These enzymes transfer heptose to the lipopolysaccharide core [].; GO: 0016757 transferase activity, transferring glycosyl groups, 0008152 metabolic process; PDB: 1PSW_A 2H1F_A 2GT1_A 3TOV_A 2H1H_A.

>KOG4626 consensus O-linked N-acetylglucosamine transferase OGT [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms]

Probab=89.35  E-value=1.4  Score=41.00  Aligned_cols=146  Identities=12%  Similarity=0.051  Sum_probs=90.6

Q ss_pred             CCceEEEEEcC-CccHHHHHHHHHHcCC-CCcEEEeCCCChhHHHHHHHhccEEEEcCCCccccHHHHHHHHhCCcEEEe
Q 027511            2 RVKVRFIVGGD-GPKRVRLEEMREKHSL-QDRVEMLGAVPHAQVRSVLISGHIFLNSSLTEAFCIAILEAASCGLLTVST   79 (222)
Q Consensus         2 ~p~~~lvi~G~-g~~~~~l~~~~~~~~l-~~~V~~~g~v~~~~~~~ll~~adv~v~~s~~E~~g~~ilEAma~G~PvVa~   79 (222)
                      .|+-.|.+.-- .--...++..++..|+ +++|.|.+-...+|--+-.+-+|+.+-|...-+-- +-.|.++.|+|+|+-
T Consensus       786 VPnS~LwllrfPa~ge~rf~ty~~~~Gl~p~riifs~va~k~eHvrr~~LaDv~LDTplcnGhT-Tg~dvLw~GvPmVTm  864 (966)
T KOG4626|consen  786 VPNSVLWLLRFPAVGEQRFRTYAEQLGLEPDRIIFSPVAAKEEHVRRGQLADVCLDTPLCNGHT-TGMDVLWAGVPMVTM  864 (966)
T ss_pred             CCcceeEEEeccccchHHHHHHHHHhCCCccceeeccccchHHHHHhhhhhhhcccCcCcCCcc-cchhhhccCCceeec
Confidence            35555555431 1112567778888888 46899988877788777888899998877743322 335778999999965


Q ss_pred             CCCCccc------cccCCceEEeCCCHHHHHHHHHHHHhcCC--CCCHHHHHHH--HHhcCCHHHHHHHHHHHHHHHhc
Q 027511           80 RVGGVPE------VLPDDMVVLAEPDPGDMVLAIRKAISLLP--KIDPQVMHER--MKKLYNWHDVAKRTEIVYDRALE  148 (222)
Q Consensus        80 ~~gg~~e------~i~~~~~g~~~~~~~~la~~i~~ll~~~~--~~~~~~~~~~--~~~~fs~~~~~~~~~~~~~~~~~  148 (222)
                      .......      +..-|..-++..+.++..+.-.++-.+.+  .....+.++.  -..-|+-...+..++..|..+.+
T Consensus       865 pge~lAsrVa~Sll~~~Gl~hliak~~eEY~~iaV~Latd~~~L~~lr~~l~~~r~~splfd~~q~~~~LE~~y~~MW~  943 (966)
T KOG4626|consen  865 PGETLASRVAASLLTALGLGHLIAKNREEYVQIAVRLATDKEYLKKLRAKLRKARASSPLFDTKQYAKGLERLYLQMWK  943 (966)
T ss_pred             ccHHHHHHHHHHHHHHcccHHHHhhhHHHHHHHHHHhhcCHHHHHHHHHHHHHHhcCCCccCchHHHHHHHHHHHHHHH
Confidence            4322211      11112222455677777777666666544  2222222221  12368999999999999987754

>PF03016 Exostosin: Exostosin family; InterPro: IPR004263 Hereditary multiple exostoses (EXT) is an autosomal dominant disorder that is characterised by the appearance of multiple outgrowths of the long bones (exostoses) at their epiphyses []

Probab=87.67  E-value=1  Score=37.55  Aligned_cols=57  Identities=12%  Similarity=0.099  Sum_probs=41.5

Q ss_pred             ChhHHHHHHHhccEEEEcCCCccccHHHHHHHHhC-CcEEEeCC--CCccccccCCceEE
Q 027511           39 PHAQVRSVLISGHIFLNSSLTEAFCIAILEAASCG-LLTVSTRV--GGVPEVLPDDMVVL   95 (222)
Q Consensus        39 ~~~~~~~ll~~adv~v~~s~~E~~g~~ilEAma~G-~PvVa~~~--gg~~e~i~~~~~g~   95 (222)
                      ...+..+.|+++...+.|.-...+...++|||++| +|||.++.  -.+.+++.=....+
T Consensus       226 ~~~~~~~~l~~S~FCL~p~G~~~~s~Rl~eal~~GcIPVii~d~~~lPf~~~ldw~~fsv  285 (302)
T PF03016_consen  226 SPSEYMELLRNSKFCLCPRGDGPWSRRLYEALAAGCIPVIISDDYVLPFEDVLDWSRFSV  285 (302)
T ss_pred             cchHHHHhcccCeEEEECCCCCcccchHHHHhhhceeeEEecCcccCCcccccCHHHEEE
Confidence            35678999999999999888777999999999999 57776653  23444553333333

Mutations in two homologous genes, EXT1 and EXT2, are responsible for the EXT syndrome. The human and mouse EXT genes have at least two homologs in the invertebrate Caenorhabditis elegans, indicating that they do not function exclusively as regulators of bone growth. EXT1 and EXT2 have both been shown to encode glycosyltransferases involved in the chain elongation step of heparan sulphate biosynthesis [].; GO: 0016020 membrane

>PLN02534 UDP-glycosyltransferase

Probab=87.51  E-value=4.3  Score=36.97  Aligned_cols=78  Identities=10%  Similarity=0.048  Sum_probs=47.9

Q ss_pred             CcEEEeCCCChhHHHHHHHhccEEEEcCCCccccHHHHHHHHhCCcEEEeCCCC----ccccccCC-ceEEe--------
Q 027511           30 DRVEMLGAVPHAQVRSVLISGHIFLNSSLTEAFCIAILEAASCGLLTVSTRVGG----VPEVLPDD-MVVLA--------   96 (222)
Q Consensus        30 ~~V~~~g~v~~~~~~~ll~~adv~v~~s~~E~~g~~ilEAma~G~PvVa~~~gg----~~e~i~~~-~~g~~--------   96 (222)
                      .++.+.|++|+.+   ++...++..+-  +.+-.++++||+++|+|+|+....+    ....+.+. ..|+.        
T Consensus       344 ~g~~v~~w~pq~~---iL~h~~v~~fv--tH~G~ns~~ea~~~GvP~v~~P~~~dq~~na~~~~e~~~vGv~~~~~~~~~  418 (491)
T PLN02534        344 RGLLIKGWAPQVL---ILSHPAIGGFL--THCGWNSTIEGICSGVPMITWPLFAEQFLNEKLIVEVLRIGVRVGVEVPVR  418 (491)
T ss_pred             CCeeccCCCCHHH---HhcCCccceEE--ecCccHHHHHHHHcCCCEEeccccccHHHHHHHHHHhhcceEEeccccccc
Confidence            4566778888744   56666662221  4455678999999999999866532    11112111 11110        


Q ss_pred             ---------CCCHHHHHHHHHHHHh
Q 027511           97 ---------EPDPGDMVLAIRKAIS  112 (222)
Q Consensus        97 ---------~~~~~~la~~i~~ll~  112 (222)
                               .-+.+++++++++++.
T Consensus       419 ~~~~~~~~~~v~~eev~~~v~~~m~  443 (491)
T PLN02534        419 WGDEERVGVLVKKDEVEKAVKTLMD  443 (491)
T ss_pred             ccccccccCccCHHHHHHHHHHHhc
Confidence                     1256899999999986

>KOG1021 consensus Acetylglucosaminyltransferase EXT1/exostosin 1 [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis; Extracellular structures]

Probab=86.79  E-value=8.3  Score=34.83  Aligned_cols=106  Identities=15%  Similarity=0.099  Sum_probs=66.4

Q ss_pred             EEEEcC---CccHHHHHHHHHH-cCCCCcEEE-eCCCC---hhHHHHHHHhccEEEEcCCCccccHHHHHHHHhC-CcEE
Q 027511            7 FIVGGD---GPKRVRLEEMREK-HSLQDRVEM-LGAVP---HAQVRSVLISGHIFLNSSLTEAFCIAILEAASCG-LLTV   77 (222)
Q Consensus         7 lvi~G~---g~~~~~l~~~~~~-~~l~~~V~~-~g~v~---~~~~~~ll~~adv~v~~s~~E~~g~~ilEAma~G-~PvV   77 (222)
                      +.++|.   |..+..+.++.++ .+...-+.+ .|..+   ...+.+.++++..-++|.-.+...-.++||+..| +|||
T Consensus       293 ~~F~G~~~~~~iR~~L~~~~~~~~~~~~~~~~~~g~~~~~~~~~y~~~m~~S~FCL~p~Gd~~ts~R~fdai~~gCvPVi  372 (464)
T KOG1021|consen  293 AFFAGAPAGGQIRSILLDLWKKDPDTEVFVNCPRGKVSCDRPLNYMEGMQDSKFCLCPPGDTPTSPRLFDAIVSGCVPVI  372 (464)
T ss_pred             EEEeccccCCcHHHHHHHHhhcCcCccccccCCCCccccCCcchHHHHhhcCeEEECCCCCCcccHhHHHHHHhCCccEE
Confidence            344553   4566777777766 111112222 22222   4778999999999999999998888999999999 5888


Q ss_pred             EeCC--CCccccccCCceEEeCCCHHHHHHHHHHHHhc
Q 027511           78 STRV--GGVPEVLPDDMVVLAEPDPGDMVLAIRKAISL  113 (222)
Q Consensus        78 a~~~--gg~~e~i~~~~~g~~~~~~~~la~~i~~ll~~  113 (222)
                      .++.  ..+.+++.-....+..+ .+++-+.|.+.+..
T Consensus       373 isd~~~lpf~~~~d~~~fSV~v~-~~~v~~~~~~iL~~  409 (464)
T KOG1021|consen  373 ISDGIQLPFGDVLDWTEFSVFVP-EKDVPELIKNILLS  409 (464)
T ss_pred             EcCCcccCcCCCccceEEEEEEE-HHHhhhHHHHHHHh
Confidence            8775  34444444444444444 45555544555543

>PLN00164 glucosyltransferase; Provisional

Probab=86.54  E-value=2.7  Score=38.10  Aligned_cols=52  Identities=17%  Similarity=0.038  Sum_probs=34.4

Q ss_pred             cHHHHHHHHhCCcEEEeCC----CCcccccc-CCceEEeC---------CCHHHHHHHHHHHHhcC
Q 027511           63 CIAILEAASCGLLTVSTRV----GGVPEVLP-DDMVVLAE---------PDPGDMVLAIRKAISLL  114 (222)
Q Consensus        63 g~~ilEAma~G~PvVa~~~----gg~~e~i~-~~~~g~~~---------~~~~~la~~i~~ll~~~  114 (222)
                      -++++||+++|+|+|+...    .-....+. .-+.|+..         -+.+++.++|.+++.++
T Consensus       367 wnS~~Eai~~GVP~l~~P~~~DQ~~Na~~~~~~~gvG~~~~~~~~~~~~~~~e~l~~av~~vm~~~  432 (480)
T PLN00164        367 WNSVLESLWHGVPMAPWPLYAEQHLNAFELVADMGVAVAMKVDRKRDNFVEAAELERAVRSLMGGG  432 (480)
T ss_pred             cchHHHHHHcCCCEEeCCccccchhHHHHHHHHhCeEEEeccccccCCcCcHHHHHHHHHHHhcCC
Confidence            4688999999999997554    22333332 22333321         15689999999999753

>PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related

Probab=81.22  E-value=14  Score=28.59  Aligned_cols=80  Identities=15%  Similarity=0.109  Sum_probs=58.3

Q ss_pred             ceEEEEEcCCccHHHHHHHHHHcCCCCcEEEeCCCCh------------hHHHHHHHhccEEEE-cCC----CccccHHH
Q 027511            4 KVRFIVGGDGPKRVRLEEMREKHSLQDRVEMLGAVPH------------AQVRSVLISGHIFLN-SSL----TEAFCIAI   66 (222)
Q Consensus         4 ~~~lvi~G~g~~~~~l~~~~~~~~l~~~V~~~g~v~~------------~~~~~ll~~adv~v~-~s~----~E~~g~~i   66 (222)
                      +-++-|+|-|.--..+.++++.+|.  +|.....-..            .++.+++++||++++ .+.    ..-++-..
T Consensus        36 g~tvgIiG~G~IG~~vA~~l~~fG~--~V~~~d~~~~~~~~~~~~~~~~~~l~ell~~aDiv~~~~plt~~T~~li~~~~  113 (178)
T PF02826_consen   36 GKTVGIIGYGRIGRAVARRLKAFGM--RVIGYDRSPKPEEGADEFGVEYVSLDELLAQADIVSLHLPLTPETRGLINAEF  113 (178)
T ss_dssp             TSEEEEESTSHHHHHHHHHHHHTT---EEEEEESSCHHHHHHHHTTEEESSHHHHHHH-SEEEE-SSSSTTTTTSBSHHH
T ss_pred             CCEEEEEEEcCCcCeEeeeeecCCc--eeEEecccCChhhhcccccceeeehhhhcchhhhhhhhhccccccceeeeeee
Confidence            5578999999999999999998886  4665444322            457889999999764 232    23467888


Q ss_pred             HHHHHhCCcEEEeCCCCcc
Q 027511           67 LEAASCGLLTVSTRVGGVP   85 (222)
Q Consensus        67 lEAma~G~PvVa~~~gg~~   85 (222)
                      ++.|--|.-+|.+..|++.
T Consensus       114 l~~mk~ga~lvN~aRG~~v  132 (178)
T PF02826_consen  114 LAKMKPGAVLVNVARGELV  132 (178)
T ss_dssp             HHTSTTTEEEEESSSGGGB
T ss_pred             eeccccceEEEeccchhhh
Confidence            9999999988887777654

All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A ....

>PF11071 DUF2872: Protein of unknown function (DUF2872); InterPro: IPR019884 This entry represents a family of uncharacterised proteins, including YtoQ from Bacillus subtilis

Probab=80.87  E-value=12  Score=27.72  Aligned_cols=95  Identities=16%  Similarity=0.177  Sum_probs=58.8

Q ss_pred             ccHHHHHHHHHHcCCCCcEEEeCCCChhH------------------------------HHHHHHhccEEEEc--CCCcc
Q 027511           14 PKRVRLEEMREKHSLQDRVEMLGAVPHAQ------------------------------VRSVLISGHIFLNS--SLTEA   61 (222)
Q Consensus        14 ~~~~~l~~~~~~~~l~~~V~~~g~v~~~~------------------------------~~~ll~~adv~v~~--s~~E~   61 (222)
                      +-|+++++.++..+|+  |.|.+.+.+.+                              -+.++..||+.|.-  -.+.-
T Consensus         9 dWRe~I~~ga~~~~L~--v~F~~PvtdH~~SD~~G~~iLG~e~~~fw~D~k~a~iN~iRT~~li~~aDvVVvrFGekYKQ   86 (141)
T PF11071_consen    9 DWREEIKEGAKAAGLP--VEFTSPVTDHEASDDCGVDILGEEPNKFWRDHKGAKINAIRTRTLIEKADVVVVRFGEKYKQ   86 (141)
T ss_pred             hHHHHHHHHHHHcCCC--eEEecCCCCchhhhhhhHHHhCCCCccccccchhhhhhHHHHHHHHhhCCEEEEEechHHHH
Confidence            4678889989888885  77777664321                              23567888887642  22222


Q ss_pred             ccHHH---HHHHHhCCcEEEeCCCCccccccCC--ceEEeCCCHHHHHHHHHHHH
Q 027511           62 FCIAI---LEAASCGLLTVSTRVGGVPEVLPDD--MVVLAEPDPGDMVLAIRKAI  111 (222)
Q Consensus        62 ~g~~i---lEAma~G~PvVa~~~gg~~e~i~~~--~~g~~~~~~~~la~~i~~ll  111 (222)
                      +. +.   -=|.|.|+|.|.-.-.....-+++-  .......++++.++.+..++
T Consensus        87 WN-aAfDAg~a~AlgKplI~lh~~~~~HpLKEvda~A~a~~et~~Qvv~iL~Yv~  140 (141)
T PF11071_consen   87 WN-AAFDAGYAAALGKPLITLHPEELHHPLKEVDAAALAVAETPEQVVEILRYVL  140 (141)
T ss_pred             HH-HHhhHHHHHHcCCCeEEecchhccccHHHHhHhhHhhhCCHHHHHHHHHHHh
Confidence            22 22   2356899999987655444333322  22345567888888887765

This family shows some sequence similarity to a family of nucleoside 2-deoxyribosyltransferases (COG3613 as iterated through CDD), but sufficiently remote that PSI-BLAST starting from YtoQ and exploring outwards does not discover the relationship.

>PF06258 Mito_fiss_Elm1: Mitochondrial fission ELM1; InterPro: IPR009367 This family consists of several hypothetical eukaryotic and prokaryotic proteins

Probab=80.72  E-value=14  Score=31.57  Aligned_cols=51  Identities=14%  Similarity=0.077  Sum_probs=37.3

Q ss_pred             CcEEEeCCCChhHHHHHHHhccEEEEcCCCccccHHHHHHHHhCCcEEEeCCCC
Q 027511           30 DRVEMLGAVPHAQVRSVLISGHIFLNSSLTEAFCIAILEAASCGLLTVSTRVGG   83 (222)
Q Consensus        30 ~~V~~~g~v~~~~~~~ll~~adv~v~~s~~E~~g~~ilEAma~G~PvVa~~~gg   83 (222)
                      +.+.+...-+..=+..+|..||.++.|...-   .=+.||++.|+||..-...+
T Consensus       209 ~~~~~~~~~~~nPy~~~La~ad~i~VT~DSv---SMvsEA~~tG~pV~v~~l~~  259 (311)
T PF06258_consen  209 PGVYIWDGTGENPYLGFLAAADAIVVTEDSV---SMVSEAAATGKPVYVLPLPG  259 (311)
T ss_pred             CceEEecCCCCCcHHHHHHhCCEEEEcCccH---HHHHHHHHcCCCEEEecCCC
Confidence            4564555555556888999999998776532   24679999999999877664

The function of this family is unknown.

>PRK00048 dihydrodipicolinate reductase; Provisional

Probab=80.64  E-value=8.4  Score=31.79  Aligned_cols=77  Identities=19%  Similarity=0.205  Sum_probs=51.8

Q ss_pred             eEEEEEcC-CccHHHHHHHHHHcCCCCcEEEeC----------------CCChhHHHHHHHhccEEEEcCCCccccHHHH
Q 027511            5 VRFIVGGD-GPKRVRLEEMREKHSLQDRVEMLG----------------AVPHAQVRSVLISGHIFLNSSLTEAFCIAIL   67 (222)
Q Consensus         5 ~~lvi~G~-g~~~~~l~~~~~~~~l~~~V~~~g----------------~v~~~~~~~ll~~adv~v~~s~~E~~g~~il   67 (222)
                      +++.|+|. |..-..+.+.+.+..   ++.+.+                ....+++..++..+|+.+..+..+...-.+.
T Consensus         2 mkV~IiG~~G~mG~~i~~~l~~~~---~~elvav~d~~~~~~~~~~~~~i~~~~dl~~ll~~~DvVid~t~p~~~~~~~~   78 (257)
T PRK00048          2 IKVAVAGASGRMGRELIEAVEAAE---DLELVAAVDRPGSPLVGQGALGVAITDDLEAVLADADVLIDFTTPEATLENLE   78 (257)
T ss_pred             cEEEEECCCCHHHHHHHHHHHhCC---CCEEEEEEecCCccccccCCCCccccCCHHHhccCCCEEEECCCHHHHHHHHH
Confidence            57889996 877666666655431   122222                1123567777878999997777666666778


Q ss_pred             HHHHhCCcEEEeCCCCc
Q 027511           68 EAASCGLLTVSTRVGGV   84 (222)
Q Consensus        68 EAma~G~PvVa~~~gg~   84 (222)
                      .|+..|+|+|....|-.
T Consensus        79 ~al~~G~~vvigttG~s   95 (257)
T PRK00048         79 FALEHGKPLVIGTTGFT   95 (257)
T ss_pred             HHHHcCCCEEEECCCCC
Confidence            89999999997654433

>PRK06718 precorrin-2 dehydrogenase; Reviewed

Probab=80.03  E-value=28  Score=27.61  Aligned_cols=85  Identities=9%  Similarity=0.037  Sum_probs=52.3

Q ss_pred             ceEEEEEcCCccHHHHHHHHHHcCCCCcEEEeCCCChhHHHH-----------------HHHhccEEEEcCCCccccHHH
Q 027511            4 KVRFIVGGDGPKRVRLEEMREKHSLQDRVEMLGAVPHAQVRS-----------------VLISGHIFLNSSLTEAFCIAI   66 (222)
Q Consensus         4 ~~~lvi~G~g~~~~~l~~~~~~~~l~~~V~~~g~v~~~~~~~-----------------ll~~adv~v~~s~~E~~g~~i   66 (222)
                      +-+++|+|.|..-...-+...+.+  .+|+....-..+++.+                 .+..+|+++.++..+.....+
T Consensus        10 ~k~vLVIGgG~va~~ka~~Ll~~g--a~V~VIs~~~~~~l~~l~~~~~i~~~~~~~~~~~l~~adlViaaT~d~elN~~i   87 (202)
T PRK06718         10 NKRVVIVGGGKVAGRRAITLLKYG--AHIVVISPELTENLVKLVEEGKIRWKQKEFEPSDIVDAFLVIAATNDPRVNEQV   87 (202)
T ss_pred             CCEEEEECCCHHHHHHHHHHHHCC--CeEEEEcCCCCHHHHHHHhCCCEEEEecCCChhhcCCceEEEEcCCCHHHHHHH
Confidence            457889998876654444444444  3466554332233333                 345567777776666666777


Q ss_pred             HHHHHhCCcEEEeCCCCccccccC
Q 027511           67 LEAASCGLLTVSTRVGGVPEVLPD   90 (222)
Q Consensus        67 lEAma~G~PvVa~~~gg~~e~i~~   90 (222)
                      .+....|.+|-..+.....+++-+
T Consensus        88 ~~~a~~~~lvn~~d~~~~~~f~~P  111 (202)
T PRK06718         88 KEDLPENALFNVITDAESGNVVFP  111 (202)
T ss_pred             HHHHHhCCcEEECCCCccCeEEEe
Confidence            777778888888777666555443

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	222
2jjm_A	394	Crystal Structure Of A Family Gt4 Glycosyltransfera		3e-07
3mbo_A	414	Crystal Structure Of The Glycosyltransferase Babsha		4e-07
3fro_A	439	Crystal Structure Of Pyrococcus Abyssi Glycogen Syn		6e-05
2bis_A	440	Structure Of Glycogen Synthase From Pyrococcus Abys		6e-05
3l01_A	428	Crystal Structure Of Monomeric Glycogen Synthase Fr		2e-04

>pdb|2JJM|A Chain A, Crystal Structure Of A Family Gt4 Glycosyltransferase From Bacillus Anthracis Orf Ba1558. Length = 394

Iteration: 1
 Score = 52.0 bits (123), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 38/113 (33%), Positives = 59/113 (52%), Gaps = 5/113 (4%)
Query: 3   VKVRFIVGGDGPKRVRLEEMREKHSLQDRVEMLGAVPHAQVRSVLISGHIFLNSSLTEAF 62
           V  + ++ GDGP+   + ++ +   ++DRV  LG      V  +L    + L  S  E+F
Sbjct: 240 VDAKLLLVGDGPEFCTILQLVKNLHIEDRVLFLG--KQDNVAELLAMSDLMLLLSEKESF 297
Query: 63  CIAILEAASCGLLTVSTRVGGVPEVLPD-DMVVLAEPDPGDMVLAIRKAISLL 114
            + +LEA +CG+  + TRVGG+PEV+   D   L E   GD      +AI LL
Sbjct: 298 GLVLLEAMACGVPCIGTRVGGIPEVIQHGDTGYLCE--VGDTTGVADQAIQLL 348

>pdb|3MBO|A Chain A, Crystal Structure Of The Glycosyltransferase Babsha Bound With Udp And L-Malate Length = 414

Iteration: 1
 Score = 51.2 bits (121), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 38/113 (33%), Positives = 59/113 (52%), Gaps = 5/113 (4%)
Query: 3   VKVRFIVGGDGPKRVRLEEMREKHSLQDRVEMLGAVPHAQVRSVLISGHIFLNSSLTEAF 62
           V  + ++ GDGP+   + ++ +   ++DRV  LG      V  +L    + L  S  E+F
Sbjct: 260 VDAKLLLVGDGPEFCTILQLVKNLHIEDRVLFLG--KQDNVAELLAMSDLMLLLSEKESF 317
Query: 63  CIAILEAASCGLLTVSTRVGGVPEVLP-DDMVVLAEPDPGDMVLAIRKAISLL 114
            + +LEA +CG+  + TRVGG+PEV+   D   L E   GD      +AI LL
Sbjct: 318 GLVLLEAMACGVPCIGTRVGGIPEVIQHGDTGYLCE--VGDTTGVADQAIQLL 368

>pdb|3FRO|A Chain A, Crystal Structure Of Pyrococcus Abyssi Glycogen Synthase With Open And Closed Conformations Length = 439

Iteration: 1
 Score = 44.3 bits (103), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 44/156 (28%), Positives = 75/156 (48%), Gaps = 15/156 (9%)
Query: 4   KVRFIVGGDGPKRVR--LEEMREKH-SLQDRVEMLGAVPHAQVRSVLISGHIFLNSSLTE 60
           ++RFI+ G G   +      + EKH +++   EML       VR +  S    +  S  E
Sbjct: 285 EMRFIIIGKGDPELEGWARSLEEKHGNVKVITEML---SREFVRELYGSVDFVIIPSYFE 341
Query: 61  AFCIAILEAASCGLLTVSTRVGGVPEVLPDDMVVLAEP-DPGDMVLAIRKAISLLPKIDP 119
            F +  LEA   G + +++ VGG+ +++ ++  +L +  DPG++  AI KA+  L + D 
Sbjct: 342 PFGLVALEAMCLGAIPIASAVGGLRDIITNETGILVKAGDPGELANAILKALE-LSRSDL 400
Query: 120 QVMHERMKK---LYNWHDVAKRTEIVY----DRALE 148
               E  KK    ++W   A+R    Y    DRA +
Sbjct: 401 SKFRENCKKRAMSFSWEKSAERYVKAYTGSIDRAFD 436

>pdb|2BIS|A Chain A, Structure Of Glycogen Synthase From Pyrococcus Abyssi Length = 440

Iteration: 1
 Score = 43.9 bits (102), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 44/156 (28%), Positives = 75/156 (48%), Gaps = 15/156 (9%)
Query: 4   KVRFIVGGDGPKRVR--LEEMREKH-SLQDRVEMLGAVPHAQVRSVLISGHIFLNSSLTE 60
           ++RFI+ G G   +      + EKH +++   EML       VR +  S    +  S  E
Sbjct: 286 EMRFIIIGKGDPELEGWARSLEEKHGNVKVITEML---SREFVRELYGSVDFVIIPSYFE 342
Query: 61  AFCIAILEAASCGLLTVSTRVGGVPEVLPDDMVVLAEP-DPGDMVLAIRKAISLLPKIDP 119
            F +  LEA   G + +++ VGG+ +++ ++  +L +  DPG++  AI KA+  L + D 
Sbjct: 343 PFGLVALEAMCLGAIPIASAVGGLRDIITNETGILVKAGDPGELANAILKALE-LSRSDL 401
Query: 120 QVMHERMKK---LYNWHDVAKRTEIVY----DRALE 148
               E  KK    ++W   A+R    Y    DRA +
Sbjct: 402 SKFRENCKKRAMSFSWEKSAERYVKAYTGSIDRAFD 437

>pdb|3L01|A Chain A, Crystal Structure Of Monomeric Glycogen Synthase From Pyrococcus Abyssi Length = 428

Iteration: 1
 Score = 42.7 bits (99), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 41/147 (27%), Positives = 71/147 (48%), Gaps = 11/147 (7%)
Query: 4   KVRFIVGGDGPKRVR--LEEMREKH-SLQDRVEMLGAVPHAQVRSVLISGHIFLNSSLTE 60
           ++RFI+ G G   +      + EKH +++   EML       VR +  S    +  S  E
Sbjct: 285 EMRFIIIGKGDPELEGWARSLEEKHGNVKVITEML---SREFVRELYGSVDFVIIPSYFE 341
Query: 61  AFCIAILEAASCGLLTVSTRVGGVPEVLPDDMVVLAEP-DPGDMVLAIRKAISLLPKIDP 119
            F +  LEA   G + +++ VGG+ +++ ++  +L +  DPG++  AI KA+  L + D 
Sbjct: 342 PFGLVALEAMCLGAIPIASAVGGLRDIITNETGILVKAGDPGELANAILKALE-LSRSDL 400
Query: 120 QVMHERMKK---LYNWHDVAKRTEIVY 143
               E  KK    ++W   A+R    Y
Sbjct: 401 SKFRENCKKRAMSFSWEKSAERYVKAY 427

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	222
2jjm_A	394	Glycosyl transferase, group 1 family protein; anth	6e-29
3okp_A	394	GDP-mannose-dependent alpha-(1-6)-phosphatidylino	5e-22
3c48_A	438	Predicted glycosyltransferases; retaining glycosyl	1e-21
2iw1_A	374	Lipopolysaccharide core biosynthesis protein RFAG;	1e-20
2gek_A	406	Phosphatidylinositol mannosyltransferase (PIMA); G	2e-20
3qhp_A	166	Type 1 capsular polysaccharide biosynthesis prote	6e-20
2r60_A	499	Glycosyl transferase, group 1; rossmann-fold; 1.80	8e-20
2f9f_A	177	First mannosyl transferase (WBAZ-1); alpha-beta pr	2e-19
2x6q_A	416	Trehalose-synthase TRET; biosynthetic protein; 2.2	3e-19
2iuy_A	342	Avigt4, glycosyltransferase; antibiotics, family G	3e-18
3s28_A	816	Sucrose synthase 1; glycosyltransferase, sucrose m	3e-16
2x0d_A	413	WSAF; GT4 family, transferase; HET: MSE; 2.28A {Ge	7e-16
3oy2_A	413	Glycosyltransferase B736L; rossmann fold, GDP-mann	3e-15
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	4e-07
3nb0_A	725	Glycogen [starch] synthase isoform 2; glycogen syn	7e-07
2hy7_A	406	Glucuronosyltransferase GUMK; glycosyltransferases	3e-04

>2jjm_A Glycosyl transferase, group 1 family protein; anthrax, nucleotide, carbohydrate; 3.10A {Bacillus anthracis} PDB: 3mbo_A* Length = 394

 Score =  110 bits (278), Expect = 6e-29
 Identities = 37/156 (23%), Positives = 69/156 (44%), Gaps = 16/156 (10%)

Query: 2   RVKVRFIVGGDGPKRVRLEEMREKHSLQDRVEMLGAVPHAQVRSVLISGHIFLNSSLTEA 61
            V  + ++ GDGP+   + ++ +   ++DRV  LG   +  V  +L    + L  S  E+
Sbjct: 239 EVDAKLLLVGDGPEFCTILQLVKNLHIEDRVLFLGKQDN--VAELLAMSDLMLLLSEKES 296

Query: 62  FCIAILEAASCGLLTVSTRVGGVPEVLPDDMV-VLAEP-DPGDMVLAIRKAISLLPKIDP 119
           F + +LEA +CG+  + TRVGG+PEV+       L E  D   +     + +      D 
Sbjct: 297 FGLVLLEAMACGVPCIGTRVGGIPEVIQHGDTGYLCEVGDTTGVADQAIQLLK-----DE 351

Query: 120 QVMH-------ERMKKLYNWHDVAKRTEIVYDRALE 148
           ++         E + + +    +  + E +Y   L 
Sbjct: 352 ELHRNMGERARESVYEQFRSEKIVSQYETIYYDVLR 387

>3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A* Length = 394

 Score = 91.6 bits (228), Expect = 5e-22
 Identities = 27/159 (16%), Positives = 57/159 (35%), Gaps = 22/159 (13%)

Query: 5   VRFIVGGDGPKRVRLEEMREKHSLQDRVEMLGAVPHAQVRSVLISGHIFLNSSLT----- 59
            + ++ G G     L  +     +   V+ LG + +  + + L +  IF   + T     
Sbjct: 230 AQLLIVGSGRYESTLRRLATD--VSQNVKFLGRLEYQDMINTLAAADIFAMPARTRGGGL 287

Query: 60  --EAFCIAILEAASCGLLTVSTRVGGVPEVLPDDMVVLAEP-DPGDMVLAIRKAISLLPK 116
             E   I  LEA +CG+  ++   GG PE +     ++ E  D   +   + + +     
Sbjct: 288 DVEGLGIVYLEAQACGVPVIAGTSGGAPETVTPATGLVVEGSDVDKLSELLIELLD---- 343

Query: 117 IDPQVMH-------ERMKKLYNWHDVAKRTEIVYDRALE 148
            DP             ++  ++W  + +R   +      
Sbjct: 344 -DPIRRAAMGAAGRAHVEAEWSWEIMGERLTNILQSEPR 381

>3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate AS catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A* Length = 438

 Score = 90.8 bits (226), Expect = 1e-21
 Identities = 29/159 (18%), Positives = 62/159 (38%), Gaps = 17/159 (10%)

Query: 2   RVKVRFIVGG----DGPKRVRLEEMREKHSLQDRVEMLGAVPHAQVRSVLISGHIFLNSS 57
              +R I+ G              M E+  ++ R+  L   P +++ +V  +  I    S
Sbjct: 274 DRNLRVIICGGPSGPNATPDTYRHMAEELGVEKRIRFLDPRPPSELVAVYRAADIVAVPS 333

Query: 58  LTEAFCIAILEAASCGLLTVSTRVGGVPEVLPDDMV-VLAEP-DPGDMVLAIRKAISLLP 115
             E+F +  +EA + G   ++ RVGG+P  + +    +L +   P     A+   +    
Sbjct: 334 FNESFGLVAMEAQASGTPVIAARVGGLPIAVAEGETGLLVDGHSPHAWADALATLLD--- 390

Query: 116 KIDPQVMHERMK------KLYNWHDVAKRTEIVYDRALE 148
             D +      +      + ++W   A +   +Y+ A+ 
Sbjct: 391 --DDETRIRMGEDAVEHARTFSWAATAAQLSSLYNDAIA 427

>2iw1_A Lipopolysaccharide core biosynthesis protein RFAG; transferase, lipopolysaccharide biosynthesis, family GT-4, glycosyltransferase, LPS; HET: U2F; 1.5A {Escherichia coli} SCOP: c.87.1.8 PDB: 2iv7_A* Length = 374

 Score = 87.8 bits (218), Expect = 1e-20
 Identities = 27/154 (17%), Positives = 57/154 (37%), Gaps = 18/154 (11%)

Query: 5   VRFIVGGDGPKRVRLEEMREKHSLQDRVEMLGAVPHAQVRSVLISGHIFLNSSLTEAFCI 64
              +      K  + E + EK  ++  V          V  ++ +  + L+ +  EA  I
Sbjct: 228 NTLLFVVGQDKPRKFEALAEKLGVRSNVHFFS--GRNDVSELMAAADLLLHPAYQEAAGI 285

Query: 65  AILEAASCGLLTVSTRVGGVPEVLPDDM--VVLAEP-DPGDMVLAIRKAISLLPKIDPQV 121
            +LEA + GL  ++T V G    + D     V+AEP     +   +RKA++         
Sbjct: 286 VLLEAITAGLPVLTTAVCGYAHYIADANCGTVIAEPFSQEQLNEVLRKALT-----QSP- 339

Query: 122 MHERMKK-------LYNWHDVAKRTEIVYDRALE 148
           +     +         + + + ++   +    L+
Sbjct: 340 LRMAWAENARHYADTQDLYSLPEKAADIITGGLD 373

>2gek_A Phosphatidylinositol mannosyltransferase (PIMA); GT4 glycosyltransferase, rossmann fold, complex; HET: GDP; 2.40A {Mycobacterium smegmatis} PDB: 2gej_A* Length = 406

 Score = 87.3 bits (217), Expect = 2e-20
 Identities = 33/153 (21%), Positives = 56/153 (36%), Gaps = 19/153 (12%)

Query: 5   VRFIVGGDGPKRVRLEEMREKHSLQDRVEMLGAVPHAQVRSVLISGHIFLNSSL-TEAFC 63
           V  ++ G G +    E+  +   L   +  LG V  A   S + S  ++    L  E+F 
Sbjct: 241 VEILIVGRGDEDELREQAGD---LAGHLRFLGQVDDATKASAMRSADVYCAPHLGGESFG 297

Query: 64  IAILEAASCGLLTVSTRVGGVPEVLPDDMV-VLAEP-DPGDMVLAIRKAISLLPKIDPQV 121
           I ++EA + G   V++ +     VL D     L    D   M  A+   +      D Q 
Sbjct: 298 IVLVEAMAAGTAVVASDLDAFRRVLADGDAGRLVPVDDADGMAAALIGILE-----DDQ- 351

Query: 122 MHERMKKL-------YNWHDVAKRTEIVYDRAL 147
           +              Y+W  V+ +   VY+   
Sbjct: 352 LRAGYVARASERVHRYDWSVVSAQIMRVYETVS 384

>3qhp_A Type 1 capsular polysaccharide biosynthesis prote (CAPJ); rossmann fold, glycosyltransferase, transferase; 1.50A {Helicobacter pylori} Length = 166

 Score = 82.2 bits (204), Expect = 6e-20
 Identities = 24/146 (16%), Positives = 57/146 (39%), Gaps = 18/146 (12%)

Query: 2   RVKVRFIVGGDGPKRVRLEEMREKHSLQDRVEMLGAVPHAQVRSVLISGHIFLNSSLTEA 61
           +  +  ++ G GP   +++ + +K  ++     +      ++  +L +  ++++++  E+
Sbjct: 30  KQDIVLLLKGKGPDEKKIKLLAQKLGVKAEFGFVN---SNELLEILKTCTLYVHAANVES 86

Query: 62  FCIAILEAASCGLLTV-STRVGGVPEVLPDDMVVLAEP-DPGDMVLAIRKAISLLPKIDP 119
             IA LEA S G++ V +            D   L EP +  D+   I   +      + 
Sbjct: 87  EAIACLEAISVGIVPVIANSPLSATRQFALDERSLFEPNNAKDLSAKIDWWLE-----NK 141

Query: 120 QVMHERMK-------KLYNWHDVAKR 138
               ERM+         Y   +   +
Sbjct: 142 L-ERERMQNEYAKSALNYTLENSVIQ 166

>2r60_A Glycosyl transferase, group 1; rossmann-fold; 1.80A {Halothermothrix orenii} PDB: 2r66_A* 2r68_A* Length = 499

 Score = 86.0 bits (213), Expect = 8e-20
 Identities = 33/144 (22%), Positives = 60/144 (41%), Gaps = 18/144 (12%)

Query: 18  RLEEMREKHSLQDRVEMLGAVPHAQV----RSVLISGHIFLNSSLTEAFCIAILEAASCG 73
           ++ E+ + +  + +V M       ++      +   G +F  +S  E F +A +EA + G
Sbjct: 323 KIIELIDNNDCRGKVSMFPLNSQQELAGCYAYLASKGSVFALTSFYEPFGLAPVEAMASG 382

Query: 74  LLTVSTRVGGVPEVLPDDMV-VLAEP-DPGDMVLAIRKAISLLPKIDPQVMH-------E 124
           L  V TR GG  E+L      VL +P DP D+   + KA         +          +
Sbjct: 383 LPAVVTRNGGPAEILDGGKYGVLVDPEDPEDIARGLLKAFE-----SEETWSAYQEKGKQ 437

Query: 125 RMKKLYNWHDVAKRTEIVYDRALE 148
           R+++ Y W + A+    V     +
Sbjct: 438 RVEERYTWQETARGYLEVIQEIAD 461

>2f9f_A First mannosyl transferase (WBAZ-1); alpha-beta protein, structural genomics, PSI, protein struct initiative; 1.80A {Archaeoglobus fulgidus} SCOP: c.87.1.8 Length = 177

 Score = 80.7 bits (200), Expect = 2e-19
 Identities = 22/120 (18%), Positives = 44/120 (36%), Gaps = 3/120 (2%)

Query: 4   KVRFIVGGDGPKRVRLEEMRE--KHSLQDRVEMLGAVPHAQVRSVLISGHIFLNSSLTEA 61
             +  + G   K    E           D V+ LG+V   ++  +       L ++  E 
Sbjct: 50  DEKLYIVGWFSKGDHAERYARKIMKIAPDNVKFLGSVSEEELIDLYSRCKGLLCTAKDED 109

Query: 62  FCIAILEAASCGLLTVSTRVGGVPEVLPDDMV-VLAEPDPGDMVLAIRKAISLLPKIDPQ 120
           F +  +EA + G   ++   GG  E + ++    L   D  +++ A++K      K    
Sbjct: 110 FGLTPIEAMASGKPVIAVNEGGFKETVINEKTGYLVNADVNEIIDAMKKVSKNPDKFKKD 169

>2x6q_A Trehalose-synthase TRET; biosynthetic protein; 2.20A {Pyrococcus horikoshii} PDB: 2x6r_A 2xa1_A 2xa2_A* 2xa9_A* 2xmp_A* Length = 416

 Score = 84.4 bits (209), Expect = 3e-19
 Identities = 27/160 (16%), Positives = 58/160 (36%), Gaps = 28/160 (17%)

Query: 5   VRFIVGGDGPK---------RVRLEEMREKHSLQDRVEMLGAVPHAQVRSVLISGHIFLN 55
           V+ ++ G                L ++ E + ++    ++G V   +V +   +  + L 
Sbjct: 263 VQLLLVGVMAHDDPEGWIYFEKTLRKIGEDYDVKVLTNLIG-VHAREVNAFQRASDVILQ 321

Query: 56  SSLTEAFCIAILEAASCGLLTVSTRVGGVPEVLPDD---MVVLAEPDPGDMVLAIRKAIS 112
            S+ E F + + EA   G   +   VGG+   + D     +V    D  + V  +   + 
Sbjct: 322 MSIREGFGLTVTEAMWKGKPVIGRAVGGIKFQIVDGETGFLV---RDANEAVEVVLYLLK 378

Query: 113 LLPKIDPQVM-------HERMKKLYNWHDVAKRTEIVYDR 145
                 P+V         ER++K +      +R   + + 
Sbjct: 379 -----HPEVSKEMGAKAKERVRKNFIITKHMERYLDILNS 413

>2iuy_A Avigt4, glycosyltransferase; antibiotics, family GT-4, avilamycin A; HET: MES; 2.1A {Streptomyces viridochromogenes} PDB: 2iv3_A* Length = 342

 Score = 81.0 bits (200), Expect = 3e-18
 Identities = 32/157 (20%), Positives = 54/157 (34%), Gaps = 15/157 (9%)

Query: 2   RVKVRFIVGGDGPKRVRLEEMREKHSLQDRVEMLGAVPHAQVRSVLISGHIFLNSSLT-- 59
               R ++ G   +    +E+  +      VE +G V   +   +L S H  L  S    
Sbjct: 186 ACGRRLVLAGPAWEPEYFDEITRR--YGSTVEPIGEVGGERRLDLLASAHAVLAMSQAVT 243

Query: 60  --------EAFCIAILEAASCGLLTVSTRVGGVPEVLPDDMVVLAEPDPGDMVLAIRKAI 111
                   E     + EAA  G   V T  G + E++P    V+            R+ +
Sbjct: 244 GPWGGIWCEPGATVVSEAAVSGTPVVGTGNGCLAEIVPSVGEVVGYGT-DFAPDEARRTL 302

Query: 112 SLLPKIDPQVMHERMKKLYNWHDVAKRTEIVYDRALE 148
           + LP      +     +L+    +A+R    Y R L 
Sbjct: 303 AGLP--ASDEVRRAAVRLWGHVTIAERYVEQYRRLLA 337

>3s28_A Sucrose synthase 1; glycosyltransferase, sucrose metabolism, sugar donar complex rossmann fold, GT-B fold, glycosyltansferase, UDP-glucose; HET: UDP LCN NHF; 2.80A {Arabidopsis thaliana} PDB: 3s27_A* 3s29_A* Length = 816

 Score = 75.8 bits (186), Expect = 3e-16
 Identities = 34/186 (18%), Positives = 70/186 (37%), Gaps = 26/186 (13%)

Query: 2   RVKVRFIVGGDGPKRVRLEEMRE---------KHSLQDRV----EMLGAVPHAQV-RSVL 47
              +  + G    +    EE  E         ++ L  +       +  V + ++ R + 
Sbjct: 603 LANLVVVGGDRRKESKDNEEKAEMKKMYDLIEEYKLNGQFRWISSQMDRVRNGELYRYIC 662

Query: 48  ISGHIFLNSSLTEAFCIAILEAASCGLLTVSTRVGGVPEVLPDDMV-VLAEP-DPGDMVL 105
            +   F+  +L EAF + ++EA +CGL T +T  GG  E++         +P        
Sbjct: 663 DTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVHGKSGFHIDPYHGDQAAD 722

Query: 106 AIRKAISLLPKIDPQVMH-------ERMKKLYNWHDVAKRTEIVYDRALECPNQNLVERL 158
            +    +   + DP           +R+++ Y W   ++R   +        + + ++RL
Sbjct: 723 TLADFFTKCKE-DPSHWDEISKGGLQRIEEKYTWQIYSQRLLTLTGVYGFWKHVSNLDRL 781

Query: 159 S--RYL 162
              RYL
Sbjct: 782 EARRYL 787

>2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A* Length = 413

 Score = 74.4 bits (182), Expect = 7e-16
 Identities = 19/145 (13%), Positives = 45/145 (31%), Gaps = 9/145 (6%)

Query: 2   RVKVRFIVGGDGPKRVRLEEMREKHSLQDRVEMLGAVPHAQVRSVLISGHIFLNSSLTEA 61
             + + I  G+  K + L            +  LG +       +L    I ++  ++  
Sbjct: 274 SNEWKIISVGEKHKDIAL-------GKGIHLNSLGKLTLEDYADLLKRSSIGISLMISPH 326

Query: 62  FCIAILEAASCGLLTVSTRVGGVPEVL-PDDMVVLAEPDPGDMVLAIRKAISLLPKIDPQ 120
                LE A  GL  ++ +           ++V L + +P ++   + +        D  
Sbjct: 327 PSYPPLEMAHFGLRVITNKYENKDLSNWHSNIVSLEQLNPENIAETLVELCMSFNNRDVD 386

Query: 121 VMH-ERMKKLYNWHDVAKRTEIVYD 144
                 M    N  +     + + +
Sbjct: 387 KKESSNMMFYINEFNEFSFIKEIEE 411

>3oy2_A Glycosyltransferase B736L; rossmann fold, GDP-mannose, sugar, VIRU proteins, viral protein,transferase; 2.31A {Paramecium bursaria chlorella virus NY} PDB: 3oy7_A* Length = 413

 Score = 72.9 bits (178), Expect = 3e-15
 Identities = 23/159 (14%), Positives = 42/159 (26%), Gaps = 20/159 (12%)

Query: 10  GGDGPKRVRLEEMREKHSLQDRVEMLGAVPHAQVRSVLISGHIFLNSSLTEAFCIAILEA 69
                + V          L   +     +   +V  +  +  + +N S  E F +   E 
Sbjct: 234 SIALRELVASGVDNVFTHLNKIMINRTVLTDERVDMMYNACDVIVNCSSGEGFGLCSAEG 293

Query: 70  ASCGLLTVSTRVGGVPEVLPDDMVVLAEPDPGDMVLAIRKAISLLPKIDPQVMHERMKKL 129
           A  G   + + VGG  +    D V   +P     V        +   ID   + E     
Sbjct: 294 AVLGKPLIISAVGGADDYFSGDCVYKIKPSAWISVDDRDGIGGIEGIIDVDDLVEAFTFF 353

Query: 130 --------------------YNWHDVAKRTEIVYDRALE 148
                                 W D++      ++  L 
Sbjct: 354 KDEKNRKEYGKRVQDFVKTKPTWDDISSDIIDFFNSLLR 392

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 49.1 bits (116), Expect = 4e-07
 Identities = 37/227 (16%), Positives = 74/227 (32%), Gaps = 51/227 (22%)

Query: 2   RVKVRFIVGGDGPKRVRLEEMREKHSLQDRVEMLGAV-PHAQVRSVLISGHIFLNSSLTE 60
           ++   +    D    ++L      HS+Q  +  L    P+     +L+  ++  N+    
Sbjct: 208 QIDPNWTSRSDHSSNIKLR----IHSIQAELRRLLKSKPYE--NCLLVLLNVQ-NAKAWN 260

Query: 61  AFCIAILEAASCGLLTVSTRVGGVPEVLP---------DDMVVLAEPDPGDMVLA--IRK 109
           AF +      SC +L ++TR   V + L          D   +   PD    +L   +  
Sbjct: 261 AFNL------SCKIL-LTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDC 313

Query: 110 AISLLP----KIDPQV-------MHERMKKLYNW-HDVAKRTEIVYDRALECPNQNLVER 157
               LP      +P+        + + +    NW H    +   + + +L        E 
Sbjct: 314 RPQDLPREVLTTNPRRLSIIAESIRDGLATWDNWKHVNCDKLTTIIESSLN--VLEPAEY 371

Query: 158 LSRYLSCGAWAGKLFCL-VMIIDYLLWRFLELWKPAEDIEEVPDIVL 203
              +         +F     I   LL     +W   + I+    +V+
Sbjct: 372 RKMFDRLS-----VFPPSAHIPTILLSL---IW--FDVIKSDVMVVV 408

>3nb0_A Glycogen [starch] synthase isoform 2; glycogen synthase, glucose-6-phosphate, yeast, allosteric AC transferase; HET: G6P; 2.41A {Saccharomyces cerevisiae} PDB: 3rt1_A* 3nch_A 3naz_A 3o3c_A* 3rsz_A* Length = 725

 Score = 48.3 bits (114), Expect = 7e-07
 Identities = 16/127 (12%), Positives = 33/127 (25%), Gaps = 18/127 (14%)

Query: 40  HAQVRSVLISGHIFLNSSLTEAFCIAILEAASCGLLTVSTRVGGVPEVLPDDMVVLAEPD 99
                  +   H+ +  S  E +     E    G+ +++T V G    + D +      D
Sbjct: 509 GLDYDEFVRGCHLGVFPSYYEPWGYTPAECTVMGVPSITTNVSGFGSYMEDLIETNQAKD 568

Query: 100 PG------------DMVLAIRKAI---SLLPKIDPQVMHERMKKL---YNWHDVAKRTEI 141
            G            + V  +   +       +          + L    +W  +      
Sbjct: 569 YGIYIVDRRFKAPDESVEQLVDYMEEFVKKTRRQRINQRNATEALSDLLDWKRMGLEYVK 628

Query: 142 VYDRALE 148
               AL 
Sbjct: 629 ARQLALR 635

>2hy7_A Glucuronosyltransferase GUMK; glycosyltransferases, xanthan, membrane-associated proteins; 1.90A {Xanthomonas campestris} PDB: 2q6v_A* 3cv3_A* 3cuy_A* Length = 406

 Score = 40.1 bits (93), Expect = 3e-04
 Identities = 25/141 (17%), Positives = 42/141 (29%), Gaps = 26/141 (18%)

Query: 5   VRFIVGGDGPKRVRLEEMREKHSLQDRVEMLGAVPHAQVRSVLISGHI----FLNSSLTE 60
           V F V G G  R             D V + G + HAQ    +         + +  +  
Sbjct: 248 VTFHVIGSGMGRHP--------GYGDNVIVYGEMKHAQTIGYIKHARFGIAPYASEQVPV 299

Query: 61  AFC---IAILEAASCGLLTVSTRVGGVPEVLPDDMVVLAEPDPGDMVLAIRKAISLLPKI 117
                 + +L+    GL  V       P             +   ++ AI +A+      
Sbjct: 300 YLADSSMKLLQYDFFGLPAVCPNAVVGPYK---SRFGYTPGNADSVIAAITQAL------ 350

Query: 118 DPQVMHERMKKLYNWHDVAKR 138
             +    R ++  NW D   R
Sbjct: 351 --EAPRVRYRQCLNWSDTTDR 369

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	222
3oy2_A	413	Glycosyltransferase B736L; rossmann fold, GDP-mann	99.94
3qhp_A	166	Type 1 capsular polysaccharide biosynthesis prote	99.93
2x6q_A	416	Trehalose-synthase TRET; biosynthetic protein; 2.2	99.93
3c48_A	438	Predicted glycosyltransferases; retaining glycosyl	99.93
3okp_A	394	GDP-mannose-dependent alpha-(1-6)-phosphatidylino	99.93
3fro_A	439	GLGA glycogen synthase; glycosyltransferase family	99.93
2jjm_A	394	Glycosyl transferase, group 1 family protein; anth	99.92
2iuy_A	342	Avigt4, glycosyltransferase; antibiotics, family G	99.92
2r60_A	499	Glycosyl transferase, group 1; rossmann-fold; 1.80	99.92
2gek_A	406	Phosphatidylinositol mannosyltransferase (PIMA); G	99.91
3s28_A	816	Sucrose synthase 1; glycosyltransferase, sucrose m	99.91
3vue_A	536	GBSS-I, granule-bound starch synthase 1, chloropla	99.9
1rzu_A	485	Glycogen synthase 1; glycosyl-transferase, GT-B fo	99.9
2qzs_A	485	Glycogen synthase; glycosyl-transferase, GT-B fold	99.9
2vsy_A	568	XCC0866; transferase, glycosyl transferase, GT-B,	99.9
2bfw_A	200	GLGA glycogen synthase; glycosyltransferase family	99.89
2f9f_A	177	First mannosyl transferase (WBAZ-1); alpha-beta pr	99.89
2iw1_A	374	Lipopolysaccharide core biosynthesis protein RFAG;	99.88
2x0d_A	413	WSAF; GT4 family, transferase; HET: MSE; 2.28A {Ge	99.87
2hy7_A	406	Glucuronosyltransferase GUMK; glycosyltransferases	99.83
1uqt_A	482	Alpha, alpha-trehalose-phosphate synthase; glycosy	99.79
2xci_A	374	KDO-transferase, 3-deoxy-D-manno-2-octulosonic aci	99.76
3nb0_A	725	Glycogen [starch] synthase isoform 2; glycogen syn	99.74
3beo_A	375	UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, a	99.74
1f0k_A	364	MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pe	99.73
1vgv_A	384	UDP-N-acetylglucosamine 2-epimerase; structural ge	99.72
3t5t_A	496	Putative glycosyltransferase; GTB fold, pseudoglyc	99.68
1v4v_A	376	UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, t	99.6
3rhz_A	339	GTF3, nucleotide sugar synthetase-like protein; gl	99.59
3ot5_A	403	UDP-N-acetylglucosamine 2-epimerase; structural ge	99.31
3dzc_A	396	UDP-N-acetylglucosamine 2-epimerase; structural ge	99.27
3otg_A	412	CALG1; calicheamicin, TDP, structural genomics, PS	99.24
3q3e_A	631	HMW1C-like glycosyltransferase; N-glycosylation; 2	99.21
2iyf_A	430	OLED, oleandomycin glycosyltransferase; antibiotic	99.21
4fzr_A	398	SSFS6; structural genomics, PSI-biology, protein s	99.18
3tsa_A	391	SPNG, NDP-rhamnosyltransferase; glycosyltransferas	99.17
3oti_A	398	CALG3; calicheamicin, TDP, structural genomics, PS	98.98
3ia7_A	402	CALG4; glycosysltransferase, calicheamicin, enediy	98.95
2o6l_A	170	UDP-glucuronosyltransferase 2B7; drug metabolism,	98.93
2p6p_A	384	Glycosyl transferase; X-RAY-diffraction,urdamycina	98.89
3rsc_A	415	CALG2; TDP, enediyne, structural genomics, PSI-2,	98.88
2yjn_A	441	ERYCIII, glycosyltransferase; transferase, cytochr	98.86
3s2u_A	365	UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape	98.85
4hwg_A	385	UDP-N-acetylglucosamine 2-epimerase; ssgcid, struc	98.84
2iya_A	424	OLEI, oleandomycin glycosyltransferase; carbohydra	98.66
4gyw_A	723	UDP-N-acetylglucosamine--peptide N- acetylglucosam	98.54
4amg_A	400	Snogd; transferase, polyketide biosynthesis, GT1 f	98.26
1iir_A	415	Glycosyltransferase GTFB; rossmann fold; 1.80A {Am	98.18
1l5w_A	796	Maltodextrin phosphorylase; enzymatic catalysis, s	98.06
2c4m_A	796	Glycogen phosphorylase; allosteric control, phosph	97.97
1rrv_A	416	Glycosyltransferase GTFD; GT-B, glycosyltransferas	97.91
2gj4_A	824	Glycogen phosphorylase, muscle form; transferase;	97.91
3h4t_A	404	Glycosyltransferase GTFA, glycosyltransferase; van	97.86
3hbm_A	282	UDP-sugar hydrolase; PSEG; 1.80A {Campylobacter je	96.96
2c1x_A	456	UDP-glucose flavonoid 3-O glycosyltransferase; WIN	96.4
2pq6_A	482	UDP-glucuronosyl/UDP-glucosyltransferase; glycosyl	96.25
1psw_A	348	ADP-heptose LPS heptosyltransferase II; structural	96.21
3hbf_A	454	Flavonoid 3-O-glucosyltransferase; glycosyltransfe	96.11
3tov_A	349	Glycosyl transferase family 9; structural genomics	95.63
2gt1_A	326	Lipopolysaccharide heptosyltransferase-1; GT-B fol	95.16
1ygp_A	879	Yeast glycogen phosphorylase; phosphorylated form,	95.09
2acv_A	463	Triterpene UDP-glucosyl transferase UGT71G1; glyco	94.61
2jzc_A	224	UDP-N-acetylglucosamine transferase subunit ALG13;	93.69
2vch_A	480	Hydroquinone glucosyltransferase; glycosyltransfer	93.57
4fyk_A	152	Deoxyribonucleoside 5'-monophosphate N-glycosidas;	90.83
4f3y_A	272	DHPR, dihydrodipicolinate reductase; structural ge	90.2
3ijp_A	288	DHPR, dihydrodipicolinate reductase; ssgcid, SBRI,	87.64
3p2y_A	381	Alanine dehydrogenase/pyridine nucleotide transhy;	86.96
4dio_A	405	NAD(P) transhydrogenase subunit alpha PART 1; stru	82.84
1rcu_A	195	Conserved hypothetical protein VT76; structural ge	81.73
1p9l_A	245	Dihydrodipicolinate reductase; oxidoreductase, lys	80.35

>3oy2_A Glycosyltransferase B736L; rossmann fold, GDP-mannose, sugar, VIRU proteins, viral protein,transferase; 2.31A {Paramecium bursaria chlorella virus NY} PDB: 3oy7_A*

Probab=99.94  E-value=5.7e-27  Score=203.12  Aligned_cols=149  Identities=15%  Similarity=0.136  Sum_probs=134.4

Q ss_pred             CCceEEEEEcCCccH------HHHHHHHHHcCCCCc-------EEEeCCCChhHHHHHHHhccEEEEcCCCccccHHHHH
Q 027511            2 RVKVRFIVGGDGPKR------VRLEEMREKHSLQDR-------VEMLGAVPHAQVRSVLISGHIFLNSSLTEAFCIAILE   68 (222)
Q Consensus         2 ~p~~~lvi~G~g~~~------~~l~~~~~~~~l~~~-------V~~~g~v~~~~~~~ll~~adv~v~~s~~E~~g~~ilE   68 (222)
                      +|+++|+|+|+|+..      +.++++++++++.++       |.+.|+++++++..+|++||++|+||..|+||++++|
T Consensus       213 ~~~~~l~ivG~g~~~~~~~l~~~~~~~~~~~~l~~~v~~l~~vv~~~g~~~~~~~~~~~~~adv~v~pS~~E~~~~~~lE  292 (413)
T 3oy2_A          213 YPDAKVRFLCNSHHESKFDLHSIALRELVASGVDNVFTHLNKIMINRTVLTDERVDMMYNACDVIVNCSSGEGFGLCSAE  292 (413)
T ss_dssp             CTTCCEEEEEECCTTCSCCHHHHHHHHHHHHTCSCHHHHHTTEEEECSCCCHHHHHHHHHHCSEEEECCSCCSSCHHHHH
T ss_pred             CCCcEEEEEeCCcccchhhHHHHHHHHHHHcCcccccccccceeeccCcCCHHHHHHHHHhCCEEEeCCCcCCCCcHHHH
Confidence            589999999999865      899999999999987       8888999999999999999999999999999999999


Q ss_pred             HHHhCCcEEEeCCCCccccccCCce-------------------EEeCCCHHHHHHHHHHHHhcCC--CCCHHHHHHHHH
Q 027511           69 AASCGLLTVSTRVGGVPEVLPDDMV-------------------VLAEPDPGDMVLAIRKAISLLP--KIDPQVMHERMK  127 (222)
Q Consensus        69 Ama~G~PvVa~~~gg~~e~i~~~~~-------------------g~~~~~~~~la~~i~~ll~~~~--~~~~~~~~~~~~  127 (222)
                      ||+||+|||+++.||.+|++.++.+                   .+...|+++++++| +++++++  ..++.++++.+.
T Consensus       293 Ama~G~PvI~s~~~g~~e~v~~~~~~~i~~~~~~~~~~~~G~~gl~~~~d~~~la~~i-~l~~~~~~~~~~~~~a~~~~~  371 (413)
T 3oy2_A          293 GAVLGKPLIISAVGGADDYFSGDCVYKIKPSAWISVDDRDGIGGIEGIIDVDDLVEAF-TFFKDEKNRKEYGKRVQDFVK  371 (413)
T ss_dssp             HHTTTCCEEEECCHHHHHHSCTTTSEEECCCEEEECTTTCSSCCEEEECCHHHHHHHH-HHTTSHHHHHHHHHHHHHHHT
T ss_pred             HHHcCCCEEEcCCCChHHHHccCcccccccccccccccccCcceeeCCCCHHHHHHHH-HHhcCHHHHHHHHHHHHHHHH
Confidence            9999999999999999999998765                   34445999999999 9999876  677888999998


Q ss_pred             hcCCHHHHHHHHHHHHHHHhcCCC
Q 027511          128 KLYNWHDVAKRTEIVYDRALECPN  151 (222)
Q Consensus       128 ~~fs~~~~~~~~~~~~~~~~~~~~  151 (222)
                      +.|+|+.+++++.++|+++++++.
T Consensus       372 ~~fs~~~~~~~~~~~~~~~~~~~~  395 (413)
T 3oy2_A          372 TKPTWDDISSDIIDFFNSLLRVES  395 (413)
T ss_dssp             TSCCHHHHHHHHHHHHHHHTC---
T ss_pred             HhCCHHHHHHHHHHHHHHHHhhcC
Confidence            999999999999999999987654

>3qhp_A Type 1 capsular polysaccharide biosynthesis prote (CAPJ); rossmann fold, glycosyltransferase, transferase; 1.50A {Helicobacter pylori}

Probab=99.93  E-value=4.4e-26  Score=174.15  Aligned_cols=133  Identities=15%  Similarity=0.260  Sum_probs=115.9

Q ss_pred             CCceEEEEEcCCccHHHHHHHHHHcCCCCcEEEeCCCChhHHHHHHHhccEEEEcCCCccccHHHHHHHHhCC-cEEE-e
Q 027511            2 RVKVRFIVGGDGPKRVRLEEMREKHSLQDRVEMLGAVPHAQVRSVLISGHIFLNSSLTEAFCIAILEAASCGL-LTVS-T   79 (222)
Q Consensus         2 ~p~~~lvi~G~g~~~~~l~~~~~~~~l~~~V~~~g~v~~~~~~~ll~~adv~v~~s~~E~~g~~ilEAma~G~-PvVa-~   79 (222)
                      .|+++|+|+|+|+..+.++++++++++  +|.| |+++++++..+|+.||++|+||..|+||++++|||+||+ |||+ +
T Consensus        30 ~~~~~l~i~G~g~~~~~~~~~~~~~~~--~v~~-g~~~~~~~~~~~~~adv~v~ps~~e~~~~~~~Eama~G~vPvi~~~  106 (166)
T 3qhp_A           30 KQDIVLLLKGKGPDEKKIKLLAQKLGV--KAEF-GFVNSNELLEILKTCTLYVHAANVESEAIACLEAISVGIVPVIANS  106 (166)
T ss_dssp             GGGEEEEEECCSTTHHHHHHHHHHHTC--EEEC-CCCCHHHHHHHHTTCSEEEECCCSCCCCHHHHHHHHTTCCEEEECC
T ss_pred             CCCeEEEEEeCCccHHHHHHHHHHcCC--eEEE-eecCHHHHHHHHHhCCEEEECCcccCccHHHHHHHhcCCCcEEeeC
Confidence            479999999999999999999999987  7999 999999999999999999999999999999999999998 9999 5


Q ss_pred             CCCCccccccCCceEEeCCCHHHHHHHHHHHHhcCC--CCCHHHHHHHHHhcCCHHHHHHH
Q 027511           80 RVGGVPEVLPDDMVVLAEPDPGDMVLAIRKAISLLP--KIDPQVMHERMKKLYNWHDVAKR  138 (222)
Q Consensus        80 ~~gg~~e~i~~~~~g~~~~~~~~la~~i~~ll~~~~--~~~~~~~~~~~~~~fs~~~~~~~  138 (222)
                      +.|+..+++.++.+.+...|+++++++|.+++++++  ..++.++++.+ ++|+|+.++++
T Consensus       107 ~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~l~~~~~~~~~~~~~~~~~~-~~~s~~~~~~~  166 (166)
T 3qhp_A          107 PLSATRQFALDERSLFEPNNAKDLSAKIDWWLENKLERERMQNEYAKSA-LNYTLENSVIQ  166 (166)
T ss_dssp             TTCGGGGGCSSGGGEECTTCHHHHHHHHHHHHHCHHHHHHHHHHHHHHH-HHHC-------
T ss_pred             CCCchhhhccCCceEEcCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHH-HHCChhhhhcC
Confidence            689999999998887777799999999999999876  56777788777 78999998764

>2x6q_A Trehalose-synthase TRET; biosynthetic protein; 2.20A {Pyrococcus horikoshii} PDB: 2x6r_A 2xa1_A 2xa2_A* 2xa9_A* 2xmp_A*

Probab=99.93  E-value=2.6e-26  Score=199.29  Aligned_cols=146  Identities=17%  Similarity=0.148  Sum_probs=132.7

Q ss_pred             CCceEEEEEcCCcc-----HHHHHHHHHHcCCCCcEEEeCCCC---hhHHHHHHHhccEEEEcCCCccccHHHHHHHHhC
Q 027511            2 RVKVRFIVGGDGPK-----RVRLEEMREKHSLQDRVEMLGAVP---HAQVRSVLISGHIFLNSSLTEAFCIAILEAASCG   73 (222)
Q Consensus         2 ~p~~~lvi~G~g~~-----~~~l~~~~~~~~l~~~V~~~g~v~---~~~~~~ll~~adv~v~~s~~E~~g~~ilEAma~G   73 (222)
                      +|+++|+|+|+|+.     .+.++++++++++.++|.|+|+++   ++++..+|+.||++|+||..|+||++++|||+||
T Consensus       260 ~~~~~l~i~G~g~~~~~~~~~~l~~~~~~~~~~~~V~~~G~~~~~~~~~~~~~~~~ad~~v~ps~~E~~~~~~lEAma~G  339 (416)
T 2x6q_A          260 IPGVQLLLVGVMAHDDPEGWIYFEKTLRKIGEDYDVKVLTNLIGVHAREVNAFQRASDVILQMSIREGFGLTVTEAMWKG  339 (416)
T ss_dssp             CTTCEEEEEECCCTTCHHHHHHHHHHHHHHTTCTTEEEEEGGGTCCHHHHHHHHHHCSEEEECCSSCSSCHHHHHHHHTT
T ss_pred             CCCeEEEEEecCcccchhHHHHHHHHHHHhCCCCcEEEecccCCCCHHHHHHHHHhCCEEEECCCcCCCccHHHHHHHcC
Confidence            58999999999975     567888999999999999999654   7899999999999999999999999999999999


Q ss_pred             CcEEEeCCCCccccccCCceEEeCCCHHHHHHHHHHHHhcCC--CCCHHHHHHHHHhcCCHHHHHHHHHHHHHHHh
Q 027511           74 LLTVSTRVGGVPEVLPDDMVVLAEPDPGDMVLAIRKAISLLP--KIDPQVMHERMKKLYNWHDVAKRTEIVYDRAL  147 (222)
Q Consensus        74 ~PvVa~~~gg~~e~i~~~~~g~~~~~~~~la~~i~~ll~~~~--~~~~~~~~~~~~~~fs~~~~~~~~~~~~~~~~  147 (222)
                      +|||+++.||.+|++.++.+|+..+|+++++++|.+++++++  ..++.++++.+.+.|+|+.+++++.++|++++
T Consensus       340 ~PvI~~~~~g~~e~i~~~~~g~l~~d~~~la~~i~~ll~~~~~~~~~~~~a~~~~~~~fs~~~~~~~~~~~~~~l~  415 (416)
T 2x6q_A          340 KPVIGRAVGGIKFQIVDGETGFLVRDANEAVEVVLYLLKHPEVSKEMGAKAKERVRKNFIITKHMERYLDILNSLG  415 (416)
T ss_dssp             CCEEEESCHHHHHHCCBTTTEEEESSHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHTBHHHHHHHHHHHHHTC-
T ss_pred             CCEEEccCCCChhheecCCCeEEECCHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHhh
Confidence            999999999999999998888776799999999999999876  56788889999899999999999999998754

>3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate AS catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A*

Probab=99.93  E-value=7.4e-26  Score=197.32  Aligned_cols=148  Identities=20%  Similarity=0.330  Sum_probs=132.9

Q ss_pred             ceEEEEEcC----CccHHHHHHHHHHcCCCCcEEEeCCCChhHHHHHHHhccEEEEcCCCccccHHHHHHHHhCCcEEEe
Q 027511            4 KVRFIVGGD----GPKRVRLEEMREKHSLQDRVEMLGAVPHAQVRSVLISGHIFLNSSLTEAFCIAILEAASCGLLTVST   79 (222)
Q Consensus         4 ~~~lvi~G~----g~~~~~l~~~~~~~~l~~~V~~~g~v~~~~~~~ll~~adv~v~~s~~E~~g~~ilEAma~G~PvVa~   79 (222)
                      +++|+|+|+    |+..+.++++++++++.++|.|+|+++++++..+|+.||++|+||..|+||++++|||+||+|||++
T Consensus       276 ~~~l~i~G~~~~~g~~~~~l~~~~~~~~l~~~v~~~g~~~~~~~~~~~~~adv~v~ps~~e~~~~~~~Eama~G~PvI~~  355 (438)
T 3c48_A          276 NLRVIICGGPSGPNATPDTYRHMAEELGVEKRIRFLDPRPPSELVAVYRAADIVAVPSFNESFGLVAMEAQASGTPVIAA  355 (438)
T ss_dssp             SEEEEEECCBC------CHHHHHHHHTTCTTTEEEECCCCHHHHHHHHHHCSEEEECCSCCSSCHHHHHHHHTTCCEEEE
T ss_pred             ceEEEEEeCCCCCCcHHHHHHHHHHHcCCCCcEEEcCCCChHHHHHHHHhCCEEEECccccCCchHHHHHHHcCCCEEec
Confidence            899999998    8888999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCccccccCCceEEeCC--CHHHHHHHHHHHHhcCC--CCCHHHHHHHHHhcCCHHHHHHHHHHHHHHHhcCCCc
Q 027511           80 RVGGVPEVLPDDMVVLAEP--DPGDMVLAIRKAISLLP--KIDPQVMHERMKKLYNWHDVAKRTEIVYDRALECPNQ  152 (222)
Q Consensus        80 ~~gg~~e~i~~~~~g~~~~--~~~~la~~i~~ll~~~~--~~~~~~~~~~~~~~fs~~~~~~~~~~~~~~~~~~~~~  152 (222)
                      +.||..|++.++.+|+..+  |+++++++|.+++++++  ..++.++++.+.+ |+|+.+++++.++|+++++.++.
T Consensus       356 ~~~~~~e~i~~~~~g~~~~~~d~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~-~s~~~~~~~~~~~~~~~~~~~~~  431 (438)
T 3c48_A          356 RVGGLPIAVAEGETGLLVDGHSPHAWADALATLLDDDETRIRMGEDAVEHART-FSWAATAAQLSSLYNDAIANENV  431 (438)
T ss_dssp             SCTTHHHHSCBTTTEEEESSCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHTCCC
T ss_pred             CCCChhHHhhCCCcEEECCCCCHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHh-CCHHHHHHHHHHHHHHHhhhccc
Confidence            9999999999987665433  89999999999999876  5677888888888 99999999999999999886543

>3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A*

Probab=99.93  E-value=1.1e-25  Score=192.92  Aligned_cols=147  Identities=18%  Similarity=0.287  Sum_probs=133.3

Q ss_pred             CCceEEEEEcCCccHHHHHHHHHHcCCCCcEEEeCCCChhHHHHHHHhccEEEEcCCC-------ccccHHHHHHHHhCC
Q 027511            2 RVKVRFIVGGDGPKRVRLEEMREKHSLQDRVEMLGAVPHAQVRSVLISGHIFLNSSLT-------EAFCIAILEAASCGL   74 (222)
Q Consensus         2 ~p~~~lvi~G~g~~~~~l~~~~~~~~l~~~V~~~g~v~~~~~~~ll~~adv~v~~s~~-------E~~g~~ilEAma~G~   74 (222)
                      +|+++|+|+|+|+..+.+++++  .++.++|.|+|+++++++..+|+.||++|+||..       |+||++++|||+||+
T Consensus       227 ~~~~~l~i~G~g~~~~~l~~~~--~~~~~~v~~~g~~~~~~~~~~~~~ad~~v~ps~~~~~~~~~e~~~~~~~Ea~a~G~  304 (394)
T 3okp_A          227 RPDAQLLIVGSGRYESTLRRLA--TDVSQNVKFLGRLEYQDMINTLAAADIFAMPARTRGGGLDVEGLGIVYLEAQACGV  304 (394)
T ss_dssp             STTCEEEEECCCTTHHHHHHHT--GGGGGGEEEEESCCHHHHHHHHHHCSEEEECCCCBGGGTBCCSSCHHHHHHHHTTC
T ss_pred             CCCeEEEEEcCchHHHHHHHHH--hcccCeEEEcCCCCHHHHHHHHHhCCEEEecCccccccccccccCcHHHHHHHcCC
Confidence            5899999999999999999988  5667899999999999999999999999999999       999999999999999


Q ss_pred             cEEEeCCCCccccccCCceEEeCC--CHHHHHHHHHHHHhcCC--CCCHHHHHHHHHhcCCHHHHHHHHHHHHHHHhcCC
Q 027511           75 LTVSTRVGGVPEVLPDDMVVLAEP--DPGDMVLAIRKAISLLP--KIDPQVMHERMKKLYNWHDVAKRTEIVYDRALECP  150 (222)
Q Consensus        75 PvVa~~~gg~~e~i~~~~~g~~~~--~~~~la~~i~~ll~~~~--~~~~~~~~~~~~~~fs~~~~~~~~~~~~~~~~~~~  150 (222)
                      |||+++.|+..|++.++ +|+..+  |+++++++|.+++++++  ..++.++++.+.++|+|+.+++++.++|+++....
T Consensus       305 PvI~~~~~~~~e~i~~~-~g~~~~~~d~~~l~~~i~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~r~~  383 (394)
T 3okp_A          305 PVIAGTSGGAPETVTPA-TGLVVEGSDVDKLSELLIELLDDPIRRAAMGAAGRAHVEAEWSWEIMGERLTNILQSEPRKL  383 (394)
T ss_dssp             CEEECSSTTGGGGCCTT-TEEECCTTCHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHTBHHHHHHHHHHHHHSCCC--
T ss_pred             CEEEeCCCChHHHHhcC-CceEeCCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHhccCc
Confidence            99999999999999998 665554  99999999999999876  66788889999999999999999999999887644


Q ss_pred             C
Q 027511          151 N  151 (222)
Q Consensus       151 ~  151 (222)
                      .
T Consensus       384 ~  384 (394)
T 3okp_A          384 A  384 (394)
T ss_dssp             -
T ss_pred             c
Confidence            3

>3fro_A GLGA glycogen synthase; glycosyltransferase family, UDP/ADP-glucose-glycogen synthas rossman folds, transferase; HET: NHF; 2.50A {Pyrococcus abyssi} SCOP: c.87.1.8 PDB: 2bis_A* 3l01_A*

Probab=99.93  E-value=2.3e-25  Score=193.25  Aligned_cols=146  Identities=23%  Similarity=0.379  Sum_probs=131.7

Q ss_pred             CceEEEEEcCCccH--HHHHHHHHHcCCCCcEEEeCCCChhHHHHHHHhccEEEEcCCCccccHHHHHHHHhCCcEEEeC
Q 027511            3 VKVRFIVGGDGPKR--VRLEEMREKHSLQDRVEMLGAVPHAQVRSVLISGHIFLNSSLTEAFCIAILEAASCGLLTVSTR   80 (222)
Q Consensus         3 p~~~lvi~G~g~~~--~~l~~~~~~~~l~~~V~~~g~v~~~~~~~ll~~adv~v~~s~~E~~g~~ilEAma~G~PvVa~~   80 (222)
                      |+++|+|+|+|+..  +.+++++++++  +++.|.|+++++++..+|++||++|+||..|+||++++|||+||+|||+++
T Consensus       284 ~~~~l~i~G~g~~~~~~~l~~~~~~~~--~~~~~~g~~~~~~~~~~~~~adv~v~ps~~e~~~~~~~EAma~G~Pvi~s~  361 (439)
T 3fro_A          284 QEMRFIIIGKGDPELEGWARSLEEKHG--NVKVITEMLSREFVRELYGSVDFVIIPSYFEPFGLVALEAMCLGAIPIASA  361 (439)
T ss_dssp             GGEEEEEECCCCHHHHHHHHHHHHHCT--TEEEECSCCCHHHHHHHHTTCSEEEECBSCCSSCHHHHHHHHTTCEEEEES
T ss_pred             CCeEEEEEcCCChhHHHHHHHHHhhcC--CEEEEcCCCCHHHHHHHHHHCCEEEeCCCCCCccHHHHHHHHCCCCeEEcC
Confidence            89999999999987  89999999988  778899999999999999999999999999999999999999999999999


Q ss_pred             CCCccccccCCceEEeCC-CHHHHHHHHHHHHh-cCC--CCCHHHHHHHHHhcCCHHHHHHHHHHHHHHHhcCCC
Q 027511           81 VGGVPEVLPDDMVVLAEP-DPGDMVLAIRKAIS-LLP--KIDPQVMHERMKKLYNWHDVAKRTEIVYDRALECPN  151 (222)
Q Consensus        81 ~gg~~e~i~~~~~g~~~~-~~~~la~~i~~ll~-~~~--~~~~~~~~~~~~~~fs~~~~~~~~~~~~~~~~~~~~  151 (222)
                      .||..|++.++.+.+..+ |+++++++|.++++ +++  ..++.++++.+ +.|+|+.+++++.++|++++++..
T Consensus       362 ~~~~~e~~~~~~g~~~~~~d~~~la~~i~~ll~~~~~~~~~~~~~~~~~~-~~~s~~~~~~~~~~~~~~~~~~~~  435 (439)
T 3fro_A          362 VGGLRDIITNETGILVKAGDPGELANAILKALELSRSDLSKFRENCKKRA-MSFSWEKSAERYVKAYTGSIDRAF  435 (439)
T ss_dssp             STHHHHHCCTTTCEEECTTCHHHHHHHHHHHHHHTTTTTHHHHHHHHHHH-HTSCHHHHHHHHHHHHHTCSCCBC
T ss_pred             CCCcceeEEcCceEEeCCCCHHHHHHHHHHHHhcCHHHHHHHHHHHHHHH-hhCcHHHHHHHHHHHHHHHHHhhh
Confidence            999999998774444444 99999999999999 666  56778888888 669999999999999999887543

>2jjm_A Glycosyl transferase, group 1 family protein; anthrax, nucleotide, carbohydrate; 3.10A {Bacillus anthracis} PDB: 3mbo_A*

Probab=99.92  E-value=1.8e-25  Score=192.66  Aligned_cols=146  Identities=23%  Similarity=0.372  Sum_probs=132.4

Q ss_pred             CceEEEEEcCCccHHHHHHHHHHcCCCCcEEEeCCCChhHHHHHHHhccEEEEcCCCccccHHHHHHHHhCCcEEEeCCC
Q 027511            3 VKVRFIVGGDGPKRVRLEEMREKHSLQDRVEMLGAVPHAQVRSVLISGHIFLNSSLTEAFCIAILEAASCGLLTVSTRVG   82 (222)
Q Consensus         3 p~~~lvi~G~g~~~~~l~~~~~~~~l~~~V~~~g~v~~~~~~~ll~~adv~v~~s~~E~~g~~ilEAma~G~PvVa~~~g   82 (222)
                      ++++|+|+|+|+..++++++++++++.++|.|+|+  .+++..+|++||++|+||..|+||++++|||+||+|||+++.|
T Consensus       240 ~~~~l~i~G~g~~~~~l~~~~~~~~l~~~v~~~g~--~~~~~~~~~~adv~v~ps~~e~~~~~~~EAma~G~PvI~~~~~  317 (394)
T 2jjm_A          240 VDAKLLLVGDGPEFCTILQLVKNLHIEDRVLFLGK--QDNVAELLAMSDLMLLLSEKESFGLVLLEAMACGVPCIGTRVG  317 (394)
T ss_dssp             SCCEEEEECCCTTHHHHHHHHHTTTCGGGBCCCBS--CSCTHHHHHTCSEEEECCSCCSCCHHHHHHHHTTCCEEEECCT
T ss_pred             CCCEEEEECCchHHHHHHHHHHHcCCCCeEEEeCc--hhhHHHHHHhCCEEEeccccCCCchHHHHHHhcCCCEEEecCC
Confidence            46899999999999999999999999999999996  5889999999999999999999999999999999999999999


Q ss_pred             CccccccCCceEEeCC--CHHHHHHHHHHHHhcCC--CCCHHHHHHHHHhcCCHHHHHHHHHHHHHHHhcCC
Q 027511           83 GVPEVLPDDMVVLAEP--DPGDMVLAIRKAISLLP--KIDPQVMHERMKKLYNWHDVAKRTEIVYDRALECP  150 (222)
Q Consensus        83 g~~e~i~~~~~g~~~~--~~~~la~~i~~ll~~~~--~~~~~~~~~~~~~~fs~~~~~~~~~~~~~~~~~~~  150 (222)
                      |..|++.++.+|+..+  |+++++++|.+++++++  ..++.++++.+.+.|+|+.+++++.++|+++++..
T Consensus       318 ~~~e~v~~~~~g~~~~~~d~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~  389 (394)
T 2jjm_A          318 GIPEVIQHGDTGYLCEVGDTTGVADQAIQLLKDEELHRNMGERARESVYEQFRSEKIVSQYETIYYDVLRDD  389 (394)
T ss_dssp             TSTTTCCBTTTEEEECTTCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHTC---
T ss_pred             ChHHHhhcCCceEEeCCCCHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhhh
Confidence            9999999887665444  99999999999999876  56788888898899999999999999999988653

>2iuy_A Avigt4, glycosyltransferase; antibiotics, family GT-4, avilamycin A; HET: MES; 2.1A {Streptomyces viridochromogenes} PDB: 2iv3_A*

Probab=99.92  E-value=4e-25  Score=187.09  Aligned_cols=139  Identities=22%  Similarity=0.279  Sum_probs=129.0

Q ss_pred             ceEEEEEcCCccHHHHHHHHHHcCCCCcEEEeCCCChhHHHHHHHhccEEEEcCC----------CccccHHHHHHHHhC
Q 027511            4 KVRFIVGGDGPKRVRLEEMREKHSLQDRVEMLGAVPHAQVRSVLISGHIFLNSSL----------TEAFCIAILEAASCG   73 (222)
Q Consensus         4 ~~~lvi~G~g~~~~~l~~~~~~~~l~~~V~~~g~v~~~~~~~ll~~adv~v~~s~----------~E~~g~~ilEAma~G   73 (222)
                      +++|+|+|+|+..+++++++++++  ++|.|+|+++++++..+|++||++|+||.          .|+||++++|||+||
T Consensus       188 ~~~l~i~G~g~~~~~l~~~~~~~~--~~v~~~g~~~~~~l~~~~~~adv~v~ps~~~~~~~~~~~~E~~~~~~~EAma~G  265 (342)
T 2iuy_A          188 GRRLVLAGPAWEPEYFDEITRRYG--STVEPIGEVGGERRLDLLASAHAVLAMSQAVTGPWGGIWCEPGATVVSEAAVSG  265 (342)
T ss_dssp             TCCEEEESCCCCHHHHHHHHHHHT--TTEEECCCCCHHHHHHHHHHCSEEEECCCCCCCTTCSCCCCCCCHHHHHHHHTT
T ss_pred             CcEEEEEeCcccHHHHHHHHHHhC--CCEEEeccCCHHHHHHHHHhCCEEEECCcccccccccccccCccHHHHHHHhcC
Confidence            578999999999999999999887  78999999999999999999999999999          899999999999999


Q ss_pred             CcEEEeCCCCccccccC--CceEEeCC-CHHHHHHHHHHHHhcCCCCCHHHHHHHHHhcCCHHHHHHHHHHHHHHHhcCC
Q 027511           74 LLTVSTRVGGVPEVLPD--DMVVLAEP-DPGDMVLAIRKAISLLPKIDPQVMHERMKKLYNWHDVAKRTEIVYDRALECP  150 (222)
Q Consensus        74 ~PvVa~~~gg~~e~i~~--~~~g~~~~-~~~~la~~i~~ll~~~~~~~~~~~~~~~~~~fs~~~~~~~~~~~~~~~~~~~  150 (222)
                      +|||+++.||..|++.+  +.+|+..+ |+++++++|.++++      +.++++.+.+.|+|+.+++++.++|+++++.+
T Consensus       266 ~PvI~s~~~~~~e~~~~~~~~~g~~~~~d~~~l~~~i~~l~~------~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~  339 (342)
T 2iuy_A          266 TPVVGTGNGCLAEIVPSVGEVVGYGTDFAPDEARRTLAGLPA------SDEVRRAAVRLWGHVTIAERYVEQYRRLLAGA  339 (342)
T ss_dssp             CCEEECCTTTHHHHGGGGEEECCSSSCCCHHHHHHHHHTSCC------HHHHHHHHHHHHBHHHHHHHHHHHHHHHHTTC
T ss_pred             CCEEEcCCCChHHHhcccCCCceEEcCCCHHHHHHHHHHHHH------HHHHHHHHHHhcCHHHHHHHHHHHHHHHHccC
Confidence            99999999999999999  77776655 99999999998876      78888889899999999999999999998753

>2r60_A Glycosyl transferase, group 1; rossmann-fold; 1.80A {Halothermothrix orenii} PDB: 2r66_A* 2r68_A*

Probab=99.92  E-value=4.8e-25  Score=195.94  Aligned_cols=148  Identities=20%  Similarity=0.287  Sum_probs=132.3

Q ss_pred             eEEEEEcC--Cc------c-------HHHHHHHHHHcCCCCcEEEeCCCChhHHHHHHHhc----cEEEEcCCCccccHH
Q 027511            5 VRFIVGGD--GP------K-------RVRLEEMREKHSLQDRVEMLGAVPHAQVRSVLISG----HIFLNSSLTEAFCIA   65 (222)
Q Consensus         5 ~~lvi~G~--g~------~-------~~~l~~~~~~~~l~~~V~~~g~v~~~~~~~ll~~a----dv~v~~s~~E~~g~~   65 (222)
                      ++++|+|+  |+      .       .++++++++++++.++|.|+|+++++++..+|+.|    |++|+||..|+||++
T Consensus       295 ~~l~i~G~~~~~~~~y~~l~~~~~~y~~~l~~~~~~~~l~~~V~~~G~v~~~~~~~~~~~a~~~~dv~v~pS~~Eg~~~~  374 (499)
T 2r60_A          295 NLVLTLRGIENPFEDYSRAGQEEKEILGKIIELIDNNDCRGKVSMFPLNSQQELAGCYAYLASKGSVFALTSFYEPFGLA  374 (499)
T ss_dssp             EEEEEESSCSBTTTBCTTSCHHHHHHHHHHHHHHHHTTCBTTEEEEECCSHHHHHHHHHHHHHTTCEEEECCSCBCCCSH
T ss_pred             eEEEEECCCCCcccccccccccchHHHHHHHHHHHhcCCCceEEECCCCCHHHHHHHHHhcCcCCCEEEECcccCCCCcH
Confidence            58999998  44      1       78899999999999999999999999999999999    999999999999999


Q ss_pred             HHHHHHhCCcEEEeCCCCccccccCCceEEe-C-CCHHHHHHHHHHHHhcCC--CCCHHHHHHHHHhcCCHHHHHHHHHH
Q 027511           66 ILEAASCGLLTVSTRVGGVPEVLPDDMVVLA-E-PDPGDMVLAIRKAISLLP--KIDPQVMHERMKKLYNWHDVAKRTEI  141 (222)
Q Consensus        66 ilEAma~G~PvVa~~~gg~~e~i~~~~~g~~-~-~~~~~la~~i~~ll~~~~--~~~~~~~~~~~~~~fs~~~~~~~~~~  141 (222)
                      ++|||+||+|||+++.||.+|++.++.+|+. . .|+++++++|.+++++++  ..++.++++.+.+.|+|+.+++++.+
T Consensus       375 ~lEAma~G~PvI~s~~~g~~e~v~~~~~g~l~~~~d~~~la~~i~~ll~~~~~~~~~~~~a~~~~~~~fs~~~~~~~~~~  454 (499)
T 2r60_A          375 PVEAMASGLPAVVTRNGGPAEILDGGKYGVLVDPEDPEDIARGLLKAFESEETWSAYQEKGKQRVEERYTWQETARGYLE  454 (499)
T ss_dssp             HHHHHHTTCCEEEESSBHHHHHTGGGTSSEEECTTCHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHSBHHHHHHHHHH
T ss_pred             HHHHHHcCCCEEEecCCCHHHHhcCCceEEEeCCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHH
Confidence            9999999999999999999999999866543 3 399999999999999876  56788889999999999999999999


Q ss_pred             HHHHHhcCCCc
Q 027511          142 VYDRALECPNQ  152 (222)
Q Consensus       142 ~~~~~~~~~~~  152 (222)
                      +|++++.....
T Consensus       455 ~y~~~~~~~~~  465 (499)
T 2r60_A          455 VIQEIADRKDE  465 (499)
T ss_dssp             HHHHHHHC---
T ss_pred             HHHHHHhhhhh
Confidence            99999876543

>2gek_A Phosphatidylinositol mannosyltransferase (PIMA); GT4 glycosyltransferase, rossmann fold, complex; HET: GDP; 2.40A {Mycobacterium smegmatis} PDB: 2gej_A*

Probab=99.91  E-value=9.7e-25  Score=187.93  Aligned_cols=146  Identities=22%  Similarity=0.269  Sum_probs=132.4

Q ss_pred             CCceEEEEEcCCccHHHHHHHHHHcCCCCcEEEeCCCChhHHHHHHHhccEEEEcCC-CccccHHHHHHHHhCCcEEEeC
Q 027511            2 RVKVRFIVGGDGPKRVRLEEMREKHSLQDRVEMLGAVPHAQVRSVLISGHIFLNSSL-TEAFCIAILEAASCGLLTVSTR   80 (222)
Q Consensus         2 ~p~~~lvi~G~g~~~~~l~~~~~~~~l~~~V~~~g~v~~~~~~~ll~~adv~v~~s~-~E~~g~~ilEAma~G~PvVa~~   80 (222)
                      +|+++|+|+|+|+. +.++++++++  .++|.|+|+++++++..+|++||++|+||. .|+||++++|||+||+|||+++
T Consensus       238 ~~~~~l~i~G~~~~-~~l~~~~~~~--~~~v~~~g~~~~~~~~~~~~~adv~v~ps~~~e~~~~~~~Ea~a~G~PvI~~~  314 (406)
T 2gek_A          238 FPDVEILIVGRGDE-DELREQAGDL--AGHLRFLGQVDDATKASAMRSADVYCAPHLGGESFGIVLVEAMAAGTAVVASD  314 (406)
T ss_dssp             STTCEEEEESCSCH-HHHHHHTGGG--GGGEEECCSCCHHHHHHHHHHSSEEEECCCSCCSSCHHHHHHHHHTCEEEECC
T ss_pred             CCCeEEEEEcCCcH-HHHHHHHHhc--cCcEEEEecCCHHHHHHHHHHCCEEEecCCCCCCCchHHHHHHHcCCCEEEec
Confidence            58999999999988 8888888876  678999999999999999999999999996 9999999999999999999999


Q ss_pred             CCCccccccCCceEEeC--CCHHHHHHHHHHHHhcCC--CCCHHHHHHHHHhcCCHHHHHHHHHHHHHHHhcCCC
Q 027511           81 VGGVPEVLPDDMVVLAE--PDPGDMVLAIRKAISLLP--KIDPQVMHERMKKLYNWHDVAKRTEIVYDRALECPN  151 (222)
Q Consensus        81 ~gg~~e~i~~~~~g~~~--~~~~~la~~i~~ll~~~~--~~~~~~~~~~~~~~fs~~~~~~~~~~~~~~~~~~~~  151 (222)
                      .||..|++.++.+|+..  .|+++++++|.+++++++  ..++.++++.+. .|+|+.+++++.++|+++++...
T Consensus       315 ~~~~~e~i~~~~~g~~~~~~d~~~l~~~i~~l~~~~~~~~~~~~~~~~~~~-~~s~~~~~~~~~~~~~~~~~~~~  388 (406)
T 2gek_A          315 LDAFRRVLADGDAGRLVPVDDADGMAAALIGILEDDQLRAGYVARASERVH-RYDWSVVSAQIMRVYETVSGAGI  388 (406)
T ss_dssp             CHHHHHHHTTTTSSEECCTTCHHHHHHHHHHHHHCHHHHHHHHHHHHHHGG-GGBHHHHHHHHHHHHHHHCCTTC
T ss_pred             CCcHHHHhcCCCceEEeCCCCHHHHHHHHHHHHcCHHHHHHHHHHHHHHHH-hCCHHHHHHHHHHHHHHHHhhcc
Confidence            99999999988776554  489999999999999876  566778888887 89999999999999999987644

>3s28_A Sucrose synthase 1; glycosyltransferase, sucrose metabolism, sugar donar complex rossmann fold, GT-B fold, glycosyltansferase, UDP-glucose; HET: UDP LCN NHF; 2.80A {Arabidopsis thaliana} PDB: 3s27_A* 3s29_A*

Probab=99.91  E-value=1.8e-24  Score=202.09  Aligned_cols=145  Identities=17%  Similarity=0.275  Sum_probs=129.7

Q ss_pred             CCceEEEEEcCCc-----------cHHHHHHHHHHcCCCCcEEEeCCCC----hhHHHHHHH-hccEEEEcCCCccccHH
Q 027511            2 RVKVRFIVGGDGP-----------KRVRLEEMREKHSLQDRVEMLGAVP----HAQVRSVLI-SGHIFLNSSLTEAFCIA   65 (222)
Q Consensus         2 ~p~~~lvi~G~g~-----------~~~~l~~~~~~~~l~~~V~~~g~v~----~~~~~~ll~-~adv~v~~s~~E~~g~~   65 (222)
                      +|+++|+|+|+|+           ..+.++++++++++.++|.|+|+++    .+++..+|. ++|++|+||..|+||++
T Consensus       601 ~~~v~LvIvG~g~~~~~~~~e~~~~~~~L~~li~~lgL~~~V~flG~~~~~v~~~eL~~~~~~aaDvfV~PS~~Egfglv  680 (816)
T 3s28_A          601 RELANLVVVGGDRRKESKDNEEKAEMKKMYDLIEEYKLNGQFRWISSQMDRVRNGELYRYICDTKGAFVQPALYEAFGLT  680 (816)
T ss_dssp             HHHCEEEEECCCTTSCCCCHHHHHHHHHHHHHHHHTTCBBBEEEECCCCCHHHHHHHHHHHHHTTCEEEECCSCBSSCHH
T ss_pred             CCCeEEEEEeCCCcccccchhhHHHHHHHHHHHHHcCCCCcEEEccCccccCCHHHHHHHHHhcCeEEEECCCccCccHH
Confidence            3679999999998           6688999999999999999999554    588999998 57999999999999999


Q ss_pred             HHHHHHhCCcEEEeCCCCccccccCCceEEe-CC-CHHHHHHHHHHHH----hcCC--CCCHHHHHHHHHhcCCHHHHHH
Q 027511           66 ILEAASCGLLTVSTRVGGVPEVLPDDMVVLA-EP-DPGDMVLAIRKAI----SLLP--KIDPQVMHERMKKLYNWHDVAK  137 (222)
Q Consensus        66 ilEAma~G~PvVa~~~gg~~e~i~~~~~g~~-~~-~~~~la~~i~~ll----~~~~--~~~~~~~~~~~~~~fs~~~~~~  137 (222)
                      ++||||||+|||+|+.||+.|++.++.+|+. .+ |+++++++|.+++    .++.  ..++.++++.+.+.|||+.+++
T Consensus       681 llEAMA~G~PVIasd~GG~~EiV~dg~~Gllv~p~D~e~LA~aI~~lL~~Ll~d~~~~~~m~~~ar~~a~~~fSwe~~a~  760 (816)
T 3s28_A          681 VVEAMTCGLPTFATCKGGPAEIIVHGKSGFHIDPYHGDQAADTLADFFTKCKEDPSHWDEISKGGLQRIEEKYTWQIYSQ  760 (816)
T ss_dssp             HHHHHHTTCCEEEESSBTHHHHCCBTTTBEEECTTSHHHHHHHHHHHHHHHHHCTHHHHHHHHHHHHHHHHSCCHHHHHH
T ss_pred             HHHHHHcCCCEEEeCCCChHHHHccCCcEEEeCCCCHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHhCCHHHHHH
Confidence            9999999999999999999999999877654 33 8999999998777    6766  6788999999999999999999


Q ss_pred             HHHHHHHHH
Q 027511          138 RTEIVYDRA  146 (222)
Q Consensus       138 ~~~~~~~~~  146 (222)
                      ++.++|+..
T Consensus       761 ~ll~lY~~~  769 (816)
T 3s28_A          761 RLLTLTGVY  769 (816)
T ss_dssp             HHHHHHHHH
T ss_pred             HHHHHHHHH
Confidence            999999865

>3vue_A GBSS-I, granule-bound starch synthase 1, chloroplastic/amyloplastic; rossmann fold, glycosyltransferase, transferase; 2.70A {Oryza sativa japonica group} PDB: 3vuf_A*

Probab=99.90  E-value=5e-24  Score=191.93  Aligned_cols=144  Identities=18%  Similarity=0.254  Sum_probs=118.9

Q ss_pred             CceEEEEEcCCccHH--HHHHHHHHcCCCCcEEEeCCCChhHHHHHHHhccEEEEcCCCccccHHHHHHHHhCCcEEEeC
Q 027511            3 VKVRFIVGGDGPKRV--RLEEMREKHSLQDRVEMLGAVPHAQVRSVLISGHIFLNSSLTEAFCIAILEAASCGLLTVSTR   80 (222)
Q Consensus         3 p~~~lvi~G~g~~~~--~l~~~~~~~~l~~~V~~~g~v~~~~~~~ll~~adv~v~~s~~E~~g~~ilEAma~G~PvVa~~   80 (222)
                      ++.+|+|+|.|+...  .++.....  +.++|.+.+..+.+++..+|+.||+||+||.+|+||++++|||+||+|||+++
T Consensus       355 ~~~~l~l~G~G~~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~~~~~~~aD~~v~PS~~E~fgl~~lEAma~G~PvI~s~  432 (536)
T 3vue_A          355 EDVQIVLLGTGKKKFEKLLKSMEEK--YPGKVRAVVKFNAPLAHLIMAGADVLAVPSRFEPCGLIQLQGMRYGTPCACAS  432 (536)
T ss_dssp             SSCEEEEECCBCHHHHHHHHHHHHH--STTTEEEECSCCHHHHHHHHHHCSEEEECCSCCSSCSHHHHHHHTTCCEEECS
T ss_pred             hCCeEEEEeccCchHHHHHHHHHhh--cCCceEEEEeccHHHHHHHHHhhheeecccccCCCCHHHHHHHHcCCCEEEcC
Confidence            467889999886553  34444444  45789999999999999999999999999999999999999999999999999


Q ss_pred             CCCccccccCCceEEe-----------CC-CHHHHHHHHHHHHhcCC-CCCHHHHHHHHHhcCCHHHHHHHHHHHHHHHh
Q 027511           81 VGGVPEVLPDDMVVLA-----------EP-DPGDMVLAIRKAISLLP-KIDPQVMHERMKKLYNWHDVAKRTEIVYDRAL  147 (222)
Q Consensus        81 ~gg~~e~i~~~~~g~~-----------~~-~~~~la~~i~~ll~~~~-~~~~~~~~~~~~~~fs~~~~~~~~~~~~~~~~  147 (222)
                      +||++|++.++.+|+.           ++ |+++++++|.++++... ....+..++.+++.|||++++++|+++|+++.
T Consensus       433 ~gG~~e~V~dg~~G~~~~~~~~~g~l~~~~d~~~la~ai~ral~~~~~~~~~~~~~~am~~~fSW~~~A~~y~~ly~~L~  512 (536)
T 3vue_A          433 TGGLVDTVIEGKTGFHMGRLSVDCKVVEPSDVKKVAATLKRAIKVVGTPAYEEMVRNCMNQDLSWKGPAKNWENVLLGLG  512 (536)
T ss_dssp             CTHHHHHCCBTTTEEECCCCCSCTTCCCHHHHHHHHHHHHHHHHHTTSHHHHHHHHHHHHSCCSSHHHHHHHHHHHHTTC
T ss_pred             CCCchheeeCCCCccccccCCCceeEECCCCHHHHHHHHHHHHHhcCcHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhh
Confidence            9999999999988862           22 68999999999998544 22233344556678999999999999999874


Q ss_pred             c
Q 027511          148 E  148 (222)
Q Consensus       148 ~  148 (222)
                      .
T Consensus       513 ~  513 (536)
T 3vue_A          513 V  513 (536)
T ss_dssp             C
T ss_pred             h
Confidence            3

>1rzu_A Glycogen synthase 1; glycosyl-transferase, GT-B fold, rossmann fold, ADP-binding, transferase; HET: ADP; 2.30A {Agrobacterium tumefaciens} SCOP: c.87.1.8 PDB: 1rzv_A

Probab=99.90  E-value=7.5e-24  Score=187.35  Aligned_cols=144  Identities=19%  Similarity=0.226  Sum_probs=120.2

Q ss_pred             CceEEEEEcCCc--cHHHHHHHHHHcCCCCcEE-EeCCCChhHHHHHHHhccEEEEcCCCccccHHHHHHHHhCCcEEEe
Q 027511            3 VKVRFIVGGDGP--KRVRLEEMREKHSLQDRVE-MLGAVPHAQVRSVLISGHIFLNSSLTEAFCIAILEAASCGLLTVST   79 (222)
Q Consensus         3 p~~~lvi~G~g~--~~~~l~~~~~~~~l~~~V~-~~g~v~~~~~~~ll~~adv~v~~s~~E~~g~~ilEAma~G~PvVa~   79 (222)
                      ++++|+|+|+|+  ..+.+++++++++  ++|. |.|+ +.+++..+|++||++|+||..|+||++++|||+||+|||++
T Consensus       319 ~~~~l~ivG~g~~~~~~~l~~~~~~~~--~~v~~~~g~-~~~~~~~~~~~adv~v~pS~~E~~~~~~lEAma~G~PvI~s  395 (485)
T 1rzu_A          319 LGGRLVVLGAGDVALEGALLAAASRHH--GRVGVAIGY-NEPLSHLMQAGCDAIIIPSRFEPCGLTQLYALRYGCIPVVA  395 (485)
T ss_dssp             TTCEEEEEECBCHHHHHHHHHHHHHTT--TTEEEEESC-CHHHHHHHHHHCSEEEECCSCCSSCSHHHHHHHHTCEEEEE
T ss_pred             cCceEEEEeCCchHHHHHHHHHHHhCC--CcEEEecCC-CHHHHHHHHhcCCEEEECcccCCCCHHHHHHHHCCCCEEEe
Confidence            478999999996  4688899998875  6787 7888 78888999999999999999999999999999999999999


Q ss_pred             CCCCccccccCC---------ceEEe-CC-CHHHHHHHHHHHH---hcCC--CCCHHHHHHHHHhcCCHHHHHHHHHHHH
Q 027511           80 RVGGVPEVLPDD---------MVVLA-EP-DPGDMVLAIRKAI---SLLP--KIDPQVMHERMKKLYNWHDVAKRTEIVY  143 (222)
Q Consensus        80 ~~gg~~e~i~~~---------~~g~~-~~-~~~~la~~i~~ll---~~~~--~~~~~~~~~~~~~~fs~~~~~~~~~~~~  143 (222)
                      +.||++|++.++         .+|+. .+ |+++++++|.+++   ++++  ..++.+++   ++.|||+.+++++.++|
T Consensus       396 ~~gg~~e~v~~~~~~~~~~~~~~G~l~~~~d~~~la~~i~~ll~~~~~~~~~~~~~~~~~---~~~fs~~~~~~~~~~~y  472 (485)
T 1rzu_A          396 RTGGLADTVIDANHAALASKAATGVQFSPVTLDGLKQAIRRTVRYYHDPKLWTQMQKLGM---KSDVSWEKSAGLYAALY  472 (485)
T ss_dssp             SSHHHHHHCCBCCHHHHHTTCCCBEEESSCSHHHHHHHHHHHHHHHTCHHHHHHHHHHHH---TCCCBHHHHHHHHHHHH
T ss_pred             CCCChhheecccccccccccCCcceEeCCCCHHHHHHHHHHHHHHhCCHHHHHHHHHHHH---HHhCChHHHHHHHHHHH
Confidence            999999999987         66644 33 9999999999999   4544  33344443   37899999999999999


Q ss_pred             HHHhcCCCc
Q 027511          144 DRALECPNQ  152 (222)
Q Consensus       144 ~~~~~~~~~  152 (222)
                      +++++.++.
T Consensus       473 ~~~~~~~~~  481 (485)
T 1rzu_A          473 SQLISKGHH  481 (485)
T ss_dssp             HHHTC----
T ss_pred             HHhhCCCCC
Confidence            999876554

>2qzs_A Glycogen synthase; glycosyl-transferase, GT-B fold, rossmann fold, closed-form, ADP and glucose binding, glycogen biosynthesis; HET: GLC ADP 250; 2.20A {Escherichia coli} PDB: 2r4t_A* 2r4u_A* 3guh_A* 3cx4_A* 3cop_A* 3d1j_A

Probab=99.90  E-value=9.1e-24  Score=186.78  Aligned_cols=143  Identities=17%  Similarity=0.187  Sum_probs=119.4

Q ss_pred             CceEEEEEcCCc--cHHHHHHHHHHcCCCCcEE-EeCCCChhHHHHHHHhccEEEEcCCCccccHHHHHHHHhCCcEEEe
Q 027511            3 VKVRFIVGGDGP--KRVRLEEMREKHSLQDRVE-MLGAVPHAQVRSVLISGHIFLNSSLTEAFCIAILEAASCGLLTVST   79 (222)
Q Consensus         3 p~~~lvi~G~g~--~~~~l~~~~~~~~l~~~V~-~~g~v~~~~~~~ll~~adv~v~~s~~E~~g~~ilEAma~G~PvVa~   79 (222)
                      ++++|+|+|+|+  ..+.+++++++++  ++|. |.|. +.+++..+|++||++|+||..|+||++++|||+||+|||++
T Consensus       320 ~~~~l~ivG~g~~~~~~~l~~~~~~~~--~~v~~~~g~-~~~~~~~~~~~adv~v~pS~~E~~g~~~lEAma~G~PvI~s  396 (485)
T 2qzs_A          320 QGGQLALLGAGDPVLQEGFLAAAAEYP--GQVGVQIGY-HEAFSHRIMGGADVILVPSRFEPCGLTQLYGLKYGTLPLVR  396 (485)
T ss_dssp             TTCEEEEEEEECHHHHHHHHHHHHHST--TTEEEEESC-CHHHHHHHHHHCSEEEECCSCCSSCSHHHHHHHHTCEEEEE
T ss_pred             CCcEEEEEeCCchHHHHHHHHHHHhCC--CcEEEeCCC-CHHHHHHHHHhCCEEEECCccCCCcHHHHHHHHCCCCEEEC
Confidence            478999999986  4688889998875  6786 7888 78888999999999999999999999999999999999999


Q ss_pred             CCCCccccccCC---------ceEEeCC--CHHHHHHHHHHHH---hcCC--CCCHHHHHHHHHhcCCHHHHHHHHHHHH
Q 027511           80 RVGGVPEVLPDD---------MVVLAEP--DPGDMVLAIRKAI---SLLP--KIDPQVMHERMKKLYNWHDVAKRTEIVY  143 (222)
Q Consensus        80 ~~gg~~e~i~~~---------~~g~~~~--~~~~la~~i~~ll---~~~~--~~~~~~~~~~~~~~fs~~~~~~~~~~~~  143 (222)
                      +.||++|++.++         .+|+..+  |+++++++|.+++   ++++  ..++.+++   ++.|||+.+++++.++|
T Consensus       397 ~~gg~~e~v~~~~~~~~~~~~~~G~l~~~~d~~~la~~i~~ll~~~~~~~~~~~~~~~~~---~~~fs~~~~~~~~~~ly  473 (485)
T 2qzs_A          397 RTGGLADTVSDCSLENLADGVASGFVFEDSNAWSLLRAIRRAFVLWSRPSLWRFVQRQAM---AMDFSWQVAAKSYRELY  473 (485)
T ss_dssp             SSHHHHHHCCBCCHHHHHTTCCCBEEECSSSHHHHHHHHHHHHHHHTSHHHHHHHHHHHH---HCCCCHHHHHHHHHHHH
T ss_pred             CCCCccceeccCccccccccccceEEECCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHH---hhcCCHHHHHHHHHHHH
Confidence            999999999987         6665433  9999999999999   4544  33344443   37899999999999999


Q ss_pred             HHHhcCCC
Q 027511          144 DRALECPN  151 (222)
Q Consensus       144 ~~~~~~~~  151 (222)
                      +++..+..
T Consensus       474 ~~~~~~~~  481 (485)
T 2qzs_A          474 YRLKLEHH  481 (485)
T ss_dssp             HHHC----
T ss_pred             HHhhhhhc
Confidence            99876544

>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*

Probab=99.90  E-value=1.9e-23  Score=188.22  Aligned_cols=140  Identities=14%  Similarity=0.121  Sum_probs=130.1

Q ss_pred             CCceEEEEEc-CCccHHHHHHHHHHcCCC-CcEEEeCCCChhHHHHHHHhccEEEEcCCCccccHHHHHHHHhCCcEEE-
Q 027511            2 RVKVRFIVGG-DGPKRVRLEEMREKHSLQ-DRVEMLGAVPHAQVRSVLISGHIFLNSSLTEAFCIAILEAASCGLLTVS-   78 (222)
Q Consensus         2 ~p~~~lvi~G-~g~~~~~l~~~~~~~~l~-~~V~~~g~v~~~~~~~ll~~adv~v~~s~~E~~g~~ilEAma~G~PvVa-   78 (222)
                      +|+++|+|+| +|+.++.++++++++++. ++|+|+|+++++++..+|+.+|++|+||.. +||++++|||+||+|||+ 
T Consensus       404 ~~~~~l~i~G~~g~~~~~l~~~~~~~~l~~~~v~~~g~~~~~~~~~~~~~adv~v~ps~~-~~g~~~lEAma~G~Pvv~~  482 (568)
T 2vsy_A          404 VPDSVLWLLSGPGEADARLRAFAHAQGVDAQRLVFMPKLPHPQYLARYRHADLFLDTHPY-NAHTTASDALWTGCPVLTT  482 (568)
T ss_dssp             CTTCEEEEECCSTTHHHHHHHHHHHTTCCGGGEEEECCCCHHHHHHHGGGCSEEECCSSS-CCSHHHHHHHHTTCCEEBC
T ss_pred             CCCcEEEEecCCHHHHHHHHHHHHHcCCChhHEEeeCCCCHHHHHHHHhcCCEEeeCCCC-CCcHHHHHHHhCCCCEEec
Confidence            5899999999 999999999999999998 999999999999999999999999999999 999999999999999999 


Q ss_pred             ------eCCC-------CccccccCCceEEeCCCHHHHHHHHHHHHhcCC--CCCHHHHHHHH--HhcCCHHHHHHHHHH
Q 027511           79 ------TRVG-------GVPEVLPDDMVVLAEPDPGDMVLAIRKAISLLP--KIDPQVMHERM--KKLYNWHDVAKRTEI  141 (222)
Q Consensus        79 ------~~~g-------g~~e~i~~~~~g~~~~~~~~la~~i~~ll~~~~--~~~~~~~~~~~--~~~fs~~~~~~~~~~  141 (222)
                            ++.|       |.+|++.+        |+++++++|.++++++.  ..++.++++.+  .+.|+|+.+++++++
T Consensus       483 ~g~~~~s~~~~~~l~~~g~~e~v~~--------~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~  554 (568)
T 2vsy_A          483 PGETFAARVAGSLNHHLGLDEMNVA--------DDAAFVAKAVALASDPAALTALHARVDVLRRASGVFHMDGFADDFGA  554 (568)
T ss_dssp             CCSSGGGSHHHHHHHHHTCGGGBCS--------SHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHSSTTCHHHHHHHHHH
T ss_pred             cCCCchHHHHHHHHHHCCChhhhcC--------CHHHHHHHHHHHhcCHHHHHHHHHHHHHhhhcCCCCCHHHHHHHHHH
Confidence                  9999       99998866        89999999999999876  56777888887  688999999999999


Q ss_pred             HHHHHhcCC
Q 027511          142 VYDRALECP  150 (222)
Q Consensus       142 ~~~~~~~~~  150 (222)
                      +|+++++..
T Consensus       555 ~y~~~~~~~  563 (568)
T 2vsy_A          555 LLQALARRH  563 (568)
T ss_dssp             HHHHHHHTT
T ss_pred             HHHHHHHHH
Confidence            999987654

>2bfw_A GLGA glycogen synthase; glycosyltransferase family 5 UDP/ADP-glucose-glycogen syntha rossman folds, transferase; 1.8A {Pyrococcus abyssi} SCOP: c.87.1.8

Probab=99.89  E-value=2.2e-23  Score=163.61  Aligned_cols=125  Identities=24%  Similarity=0.352  Sum_probs=112.3

Q ss_pred             CCceEEEEEcCCc--cHHHHHHHHHHcCCCCcEEE-eCCCChhHHHHHHHhccEEEEcCCCccccHHHHHHHHhCCcEEE
Q 027511            2 RVKVRFIVGGDGP--KRVRLEEMREKHSLQDRVEM-LGAVPHAQVRSVLISGHIFLNSSLTEAFCIAILEAASCGLLTVS   78 (222)
Q Consensus         2 ~p~~~lvi~G~g~--~~~~l~~~~~~~~l~~~V~~-~g~v~~~~~~~ll~~adv~v~~s~~E~~g~~ilEAma~G~PvVa   78 (222)
                      +|+++|+|+|+|+  ..+++++++++++   +|+| +|+++++++..+|+.||++|+||..|+||++++|||+||+|||+
T Consensus        68 ~~~~~l~i~G~~~~~~~~~l~~~~~~~~---~v~~~~g~~~~~~~~~~~~~ad~~l~ps~~e~~~~~~~Ea~a~G~PvI~  144 (200)
T 2bfw_A           68 FQEMRFIIIGKGDPELEGWARSLEEKHG---NVKVITEMLSREFVRELYGSVDFVIIPSYFEPFGLVALEAMCLGAIPIA  144 (200)
T ss_dssp             GGGEEEEEECCBCHHHHHHHHHHHHHCT---TEEEECSCCCHHHHHHHHTTCSEEEECCSCCSSCHHHHHHHHTTCEEEE
T ss_pred             CCCeEEEEECCCChHHHHHHHHHHHhcC---CEEEEeccCCHHHHHHHHHHCCEEEECCCCCCccHHHHHHHHCCCCEEE
Confidence            4799999999998  8889999999887   8999 99999999999999999999999999999999999999999999


Q ss_pred             eCCCCccccccCCceEEeCC--CHHHHHHHHHHHHh-cCC--CCCHHHHHHHHHhcCC
Q 027511           79 TRVGGVPEVLPDDMVVLAEP--DPGDMVLAIRKAIS-LLP--KIDPQVMHERMKKLYN  131 (222)
Q Consensus        79 ~~~gg~~e~i~~~~~g~~~~--~~~~la~~i~~ll~-~~~--~~~~~~~~~~~~~~fs  131 (222)
                      ++.|+..|++ ++.+|+..+  |+++++++|.++++ ++.  ..++.++++.+.+ ||
T Consensus       145 ~~~~~~~e~~-~~~~g~~~~~~~~~~l~~~i~~l~~~~~~~~~~~~~~a~~~~~~-fs  200 (200)
T 2bfw_A          145 SAVGGLRDII-TNETGILVKAGDPGELANAILKALELSRSDLSKFRENCKKRAMS-FS  200 (200)
T ss_dssp             ESCHHHHHHC-CTTTCEEECTTCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH-TC
T ss_pred             eCCCChHHHc-CCCceEEecCCCHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHh-cC
Confidence            9999999999 665554433  99999999999999 766  6677888888777 75

>2f9f_A First mannosyl transferase (WBAZ-1); alpha-beta protein, structural genomics, PSI, protein struct initiative; 1.80A {Archaeoglobus fulgidus} SCOP: c.87.1.8

Probab=99.89  E-value=1e-22  Score=157.76  Aligned_cols=123  Identities=17%  Similarity=0.185  Sum_probs=110.1

Q ss_pred             CceEEEEEcCCccHHHHHHHHH--HcCCCCcEEEeCCCChhHHHHHHHhccEEEEcCCCccccHHHHHHHHhCCcEEEeC
Q 027511            3 VKVRFIVGGDGPKRVRLEEMRE--KHSLQDRVEMLGAVPHAQVRSVLISGHIFLNSSLTEAFCIAILEAASCGLLTVSTR   80 (222)
Q Consensus         3 p~~~lvi~G~g~~~~~l~~~~~--~~~l~~~V~~~g~v~~~~~~~ll~~adv~v~~s~~E~~g~~ilEAma~G~PvVa~~   80 (222)
                      |+++|+|+|+|+..++++++++  ++++.++|.|+|+++++++..+|+.||++|+||..|+||++++|||+||+|||+++
T Consensus        49 ~~~~l~i~G~~~~~~~l~~~~~~~~~~l~~~v~~~g~~~~~e~~~~~~~adi~v~ps~~e~~~~~~~Eama~G~PvI~~~  128 (177)
T 2f9f_A           49 QDEKLYIVGWFSKGDHAERYARKIMKIAPDNVKFLGSVSEEELIDLYSRCKGLLCTAKDEDFGLTPIEAMASGKPVIAVN  128 (177)
T ss_dssp             TTSCEEEEBCCCTTSTHHHHHHHHHHHSCTTEEEEESCCHHHHHHHHHHCSEEEECCSSCCSCHHHHHHHHTTCCEEEES
T ss_pred             CCcEEEEEecCccHHHHHHHHHhhhcccCCcEEEeCCCCHHHHHHHHHhCCEEEeCCCcCCCChHHHHHHHcCCcEEEeC
Confidence            6889999999998889999998  88899999999999999999999999999999999999999999999999999999


Q ss_pred             CCCccccccCCceEEe-CCCHHHHHHHHHHHHhcCCCCCHHHHHHHH
Q 027511           81 VGGVPEVLPDDMVVLA-EPDPGDMVLAIRKAISLLPKIDPQVMHERM  126 (222)
Q Consensus        81 ~gg~~e~i~~~~~g~~-~~~~~~la~~i~~ll~~~~~~~~~~~~~~~  126 (222)
                      .|+..|++.++.+|+. ..|+++++++|.++++++. .+.+++++++
T Consensus       129 ~~~~~e~i~~~~~g~~~~~d~~~l~~~i~~l~~~~~-~~~~~~~~~a  174 (177)
T 2f9f_A          129 EGGFKETVINEKTGYLVNADVNEIIDAMKKVSKNPD-KFKKDCFRRA  174 (177)
T ss_dssp             SHHHHHHCCBTTTEEEECSCHHHHHHHHHHHHHCTT-TTHHHHHHHH
T ss_pred             CCCHHHHhcCCCccEEeCCCHHHHHHHHHHHHhCHH-HHHHHHHHHH
Confidence            9999999998766644 5699999999999999876 2355555544

>2iw1_A Lipopolysaccharide core biosynthesis protein RFAG; transferase, lipopolysaccharide biosynthesis, family GT-4, glycosyltransferase, LPS; HET: U2F; 1.5A {Escherichia coli} SCOP: c.87.1.8 PDB: 2iv7_A*

Probab=99.88  E-value=2.1e-23  Score=177.67  Aligned_cols=141  Identities=18%  Similarity=0.274  Sum_probs=124.5

Q ss_pred             CceEEEEEcCCccHHHHHHHHHHcCCCCcEEEeCCCChhHHHHHHHhccEEEEcCCCccccHHHHHHHHhCCcEEEeCCC
Q 027511            3 VKVRFIVGGDGPKRVRLEEMREKHSLQDRVEMLGAVPHAQVRSVLISGHIFLNSSLTEAFCIAILEAASCGLLTVSTRVG   82 (222)
Q Consensus         3 p~~~lvi~G~g~~~~~l~~~~~~~~l~~~V~~~g~v~~~~~~~ll~~adv~v~~s~~E~~g~~ilEAma~G~PvVa~~~g   82 (222)
                      |+++|+|+|+|+ .+.++++++++++.++|.|+|+  .+++..+|+.||++|+||..|+||++++|||+||+|||+++.|
T Consensus       227 ~~~~l~i~G~g~-~~~~~~~~~~~~~~~~v~~~g~--~~~~~~~~~~ad~~v~ps~~e~~~~~~~Ea~a~G~Pvi~~~~~  303 (374)
T 2iw1_A          227 HNTLLFVVGQDK-PRKFEALAEKLGVRSNVHFFSG--RNDVSELMAAADLLLHPAYQEAAGIVLLEAITAGLPVLTTAVC  303 (374)
T ss_dssp             HTEEEEEESSSC-CHHHHHHHHHHTCGGGEEEESC--CSCHHHHHHHCSEEEECCSCCSSCHHHHHHHHHTCCEEEETTS
T ss_pred             CceEEEEEcCCC-HHHHHHHHHHcCCCCcEEECCC--cccHHHHHHhcCEEEeccccCCcccHHHHHHHCCCCEEEecCC
Confidence            689999999987 4788999999999999999998  5889999999999999999999999999999999999999999


Q ss_pred             CccccccCCceEEeC--C-CHHHHHHHHHHHHhcCC--CCCHHHHHHHHHhcCCHHHHHHHHHHHHHHHh
Q 027511           83 GVPEVLPDDMVVLAE--P-DPGDMVLAIRKAISLLP--KIDPQVMHERMKKLYNWHDVAKRTEIVYDRAL  147 (222)
Q Consensus        83 g~~e~i~~~~~g~~~--~-~~~~la~~i~~ll~~~~--~~~~~~~~~~~~~~fs~~~~~~~~~~~~~~~~  147 (222)
                      |..|++.++.+|+..  + |+++++++|.+++++++  ..++.++++.+. .|+|..+.+++.++++..+
T Consensus       304 ~~~e~i~~~~~g~~~~~~~~~~~l~~~i~~l~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~l  372 (374)
T 2iw1_A          304 GYAHYIADANCGTVIAEPFSQEQLNEVLRKALTQSPLRMAWAENARHYAD-TQDLYSLPEKAADIITGGL  372 (374)
T ss_dssp             TTTHHHHHHTCEEEECSSCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHH-HSCCSCHHHHHHHHHHCC-
T ss_pred             CchhhhccCCceEEeCCCCCHHHHHHHHHHHHcChHHHHHHHHHHHHHHH-HhhHHHHHHHHHHHHHHhh
Confidence            999999988776543  3 89999999999999876  566777777776 4799999999999887543

>2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A*

Probab=99.87  E-value=1.7e-23  Score=182.91  Aligned_cols=134  Identities=13%  Similarity=0.077  Sum_probs=106.2

Q ss_pred             ceEEEEEcCCccHHHHHHHHHHcCCCCcEEEeCCCChhHHHHHHHhccEEEEcCCCccccHHHHHHHHhCCcEEEeCCCC
Q 027511            4 KVRFIVGGDGPKRVRLEEMREKHSLQDRVEMLGAVPHAQVRSVLISGHIFLNSSLTEAFCIAILEAASCGLLTVSTRVGG   83 (222)
Q Consensus         4 ~~~lvi~G~g~~~~~l~~~~~~~~l~~~V~~~g~v~~~~~~~ll~~adv~v~~s~~E~~g~~ilEAma~G~PvVa~~~gg   83 (222)
                      +++|+|+|+|+.+       .++++.++|+|+|+++.+++..+|++||+||+||..|+||++++||||||+|||++ .||
T Consensus       276 ~~~l~ivG~~~~~-------~~l~~~~~v~f~G~~~~~~l~~~~~~adv~v~pS~~E~~g~~~lEAmA~G~PVV~~-~~g  347 (413)
T 2x0d_A          276 EWKIISVGEKHKD-------IALGKGIHLNSLGKLTLEDYADLLKRSSIGISLMISPHPSYPPLEMAHFGLRVITN-KYE  347 (413)
T ss_dssp             GCEEEEEESCCCC-------EEEETTEEEEEEESCCHHHHHHHHHHCCEEECCCSSSSCCSHHHHHHHTTCEEEEE-CBT
T ss_pred             ceEEEEEcCCchh-------hhcCCcCcEEEcCCCCHHHHHHHHHhCCEEEEecCCCCCCcHHHHHHhCCCcEEEe-CCC
Confidence            4899999998764       34567789999999999999999999999999999999999999999999999995 466


Q ss_pred             ccccccCCceEE-eCC-CHHHHHHHHHHHHhcCCCCCHHHHHHHHHhcCCHHHHHHHHHHHHHHHhc
Q 027511           84 VPEVLPDDMVVL-AEP-DPGDMVLAIRKAISLLPKIDPQVMHERMKKLYNWHDVAKRTEIVYDRALE  148 (222)
Q Consensus        84 ~~e~i~~~~~g~-~~~-~~~~la~~i~~ll~~~~~~~~~~~~~~~~~~fs~~~~~~~~~~~~~~~~~  148 (222)
                      ..|++.++.+|+ +++ |+++++++|.+++++++.... ++++. .+.|+|+.+.++ .+.|+++..
T Consensus       348 ~~e~v~~~~~G~lv~~~d~~~la~ai~~ll~~~~~~~~-~~~~~-~~~~~W~~~~~~-~~~~~~l~~  411 (413)
T 2x0d_A          348 NKDLSNWHSNIVSLEQLNPENIAETLVELCMSFNNRDV-DKKES-SNMMFYINEFNE-FSFIKEIEE  411 (413)
T ss_dssp             TBCGGGTBTTEEEESSCSHHHHHHHHHHHHHHTC--------CC-BSCGGGCCCC----TTHHHHHT
T ss_pred             cchhhhcCCCEEEeCCCCHHHHHHHHHHHHcCHHHHHH-hHHHH-HHhCCHHHHHHH-HHHHHHHHh
Confidence            789999887775 443 999999999999999872222 34443 357999999887 666666653

>2hy7_A Glucuronosyltransferase GUMK; glycosyltransferases, xanthan, membrane-associated proteins; 1.90A {Xanthomonas campestris} PDB: 2q6v_A* 3cv3_A* 3cuy_A*

Probab=99.83  E-value=2.1e-21  Score=169.13  Aligned_cols=128  Identities=20%  Similarity=0.258  Sum_probs=110.5

Q ss_pred             CCceEEEEEcCCccHHHHHHHHHHcCCCCcEEEeCCCChhHHHHHHHhccEEEEcCCCccccHHHHHHH-------HhCC
Q 027511            2 RVKVRFIVGGDGPKRVRLEEMREKHSLQDRVEMLGAVPHAQVRSVLISGHIFLNSSLTEAFCIAILEAA-------SCGL   74 (222)
Q Consensus         2 ~p~~~lvi~G~g~~~~~l~~~~~~~~l~~~V~~~g~v~~~~~~~ll~~adv~v~~s~~E~~g~~ilEAm-------a~G~   74 (222)
                      .|+++|+|+|+|+        ++++++.++|.|+|+++++++..+|++||++|+||..|+||++++|||       |||+
T Consensus       245 ~~~~~l~ivG~g~--------~~~~~l~~~V~f~G~~~~~~l~~~~~~adv~v~ps~~E~~~~~~lEAm~Kl~eYla~G~  316 (406)
T 2hy7_A          245 FPQVTFHVIGSGM--------GRHPGYGDNVIVYGEMKHAQTIGYIKHARFGIAPYASEQVPVYLADSSMKLLQYDFFGL  316 (406)
T ss_dssp             CTTEEEEEESCSS--------CCCTTCCTTEEEECCCCHHHHHHHHHTCSEEECCBSCSCCCTTHHHHCHHHHHHHHHTC
T ss_pred             CCCeEEEEEeCch--------HHhcCCCCCEEEcCCCCHHHHHHHHHhcCEEEECCCcccCchHHHHHHHHHHHHhhCCC
Confidence            5899999999997        566788899999999999999999999999999999999999999999       9999


Q ss_pred             cEEEeCCCCccccccCCceE-E-eC-CCHHHHHHHHHHHHhcCCCCCHHHHHHHHHhcCCHHHHHHHHHHH--HHHHhcC
Q 027511           75 LTVSTRVGGVPEVLPDDMVV-L-AE-PDPGDMVLAIRKAISLLPKIDPQVMHERMKKLYNWHDVAKRTEIV--YDRALEC  149 (222)
Q Consensus        75 PvVa~~~gg~~e~i~~~~~g-~-~~-~~~~~la~~i~~ll~~~~~~~~~~~~~~~~~~fs~~~~~~~~~~~--~~~~~~~  149 (222)
                      |||+|+.      +.++.+| + +. .|+++++++|.++++++..        ...+.|+|+.+++++.++  |+++...
T Consensus       317 PVIas~~------v~~~~~G~l~v~~~d~~~la~ai~~ll~~~~~--------~~~~~~sw~~~a~~~~~~~~y~~~~~~  382 (406)
T 2hy7_A          317 PAVCPNA------VVGPYKSRFGYTPGNADSVIAAITQALEAPRV--------RYRQCLNWSDTTDRVLDPRAYPETRLY  382 (406)
T ss_dssp             CEEEEGG------GTCSCSSEEEECTTCHHHHHHHHHHHHHCCCC--------CCSCCCBHHHHHHHHHCGGGSGGGBSS
T ss_pred             cEEEehh------cccCcceEEEeCCCCHHHHHHHHHHHHhCcch--------hhhhcCCHHHHHHHHHHhhcccccCcC
Confidence            9999988      4455444 3 34 4999999999999998761        335789999999999999  9887654


Q ss_pred             CC
Q 027511          150 PN  151 (222)
Q Consensus       150 ~~  151 (222)
                      +.
T Consensus       383 ~~  384 (406)
T 2hy7_A          383 PH  384 (406)
T ss_dssp             CC
T ss_pred             CC
Confidence            43

>1uqt_A Alpha, alpha-trehalose-phosphate synthase; glycosyltransferase, transferase; HET: U2F; 2.0A {Escherichia coli} SCOP: c.87.1.6 PDB: 1uqu_A* 2wtx_A* 1gz5_A*

Probab=99.79  E-value=1.3e-18  Score=154.72  Aligned_cols=140  Identities=11%  Similarity=0.111  Sum_probs=111.5

Q ss_pred             ceEEEEEcC-----CccH----HHHHHHHHHc----CCC--CcEE-EeCCCChhHHHHHHHhccEEEEcCCCccccHHHH
Q 027511            4 KVRFIVGGD-----GPKR----VRLEEMREKH----SLQ--DRVE-MLGAVPHAQVRSVLISGHIFLNSSLTEAFCIAIL   67 (222)
Q Consensus         4 ~~~lvi~G~-----g~~~----~~l~~~~~~~----~l~--~~V~-~~g~v~~~~~~~ll~~adv~v~~s~~E~~g~~il   67 (222)
                      +++|+++|+     |+.+    +++++++.++    +..  ..|+ +.|.++.+++..+|+.||++|+||..|+||++++
T Consensus       290 ~v~Lv~vG~p~~~~~~~~~~l~~~l~~l~~~in~~~g~~~~~~v~~~~g~v~~~el~~ly~~ADv~v~pS~~EGfgLv~l  369 (482)
T 1uqt_A          290 KIRYTQIAPTSRGDVQAYQDIRHQLENEAGRINGKYGQLGWTPLYYLNQHFDRKLLMKIFRYSDVGLVTPLRDGMNLVAK  369 (482)
T ss_dssp             TEEEEEECCBCSTTSHHHHHHHHHHHHHHHHHHHHHCBTTBCSEEEECSCCCHHHHHHHHHHCSEEEECCSSBSCCHHHH
T ss_pred             cEEEEEEECCCccchHHHHHHHHHHHHHHHHHhhhcccCCCceEEEeCCCCCHHHHHHHHHHccEEEECCCcccCCchHH
Confidence            478999984     3333    3445554442    221  1355 5799999999999999999999999999999999


Q ss_pred             HHHHhCC-----cEEEeCCCCccccccCCceEEeCC-CHHHHHHHHHHHHhcCC---CCCHHHHHHHHHhcCCHHHHHHH
Q 027511           68 EAASCGL-----LTVSTRVGGVPEVLPDDMVVLAEP-DPGDMVLAIRKAISLLP---KIDPQVMHERMKKLYNWHDVAKR  138 (222)
Q Consensus        68 EAma~G~-----PvVa~~~gg~~e~i~~~~~g~~~~-~~~~la~~i~~ll~~~~---~~~~~~~~~~~~~~fs~~~~~~~  138 (222)
                      ||||||+     |||+|+.+|..+.+. + ..+++| |+++++++|.++++++.   +.++.++++.+.+ |+|+..+++
T Consensus       370 EAmA~g~~~~~gpvV~S~~~G~~~~l~-~-g~lv~p~d~~~lA~ai~~lL~~~~~~r~~~~~~~~~~v~~-~s~~~~a~~  446 (482)
T 1uqt_A          370 EYVAAQDPANPGVLVLSQFAGAANELT-S-ALIVNPYDRDEVAAALDRALTMSLAERISRHAEMLDVIVK-NDINHWQEC  446 (482)
T ss_dssp             HHHHHSCTTSCCEEEEETTBGGGGTCT-T-SEEECTTCHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHH-TCHHHHHHH
T ss_pred             HHHHhCCCCCCCCEEEECCCCCHHHhC-C-eEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHh-CCHHHHHHH
Confidence            9999997     999999888888774 3 334545 99999999999998754   5567777777765 999999999


Q ss_pred             HHHHHHHH
Q 027511          139 TEIVYDRA  146 (222)
Q Consensus       139 ~~~~~~~~  146 (222)
                      +.+.|+++
T Consensus       447 ~l~~l~~~  454 (482)
T 1uqt_A          447 FISDLKQI  454 (482)
T ss_dssp             HHHHHHHS
T ss_pred             HHHHHHhc
Confidence            99999876

>2xci_A KDO-transferase, 3-deoxy-D-manno-2-octulosonic acid transferase; KDTA, GSEA, glycosyltransferase superfamily B,; HET: PG4; 2.00A {Aquifex aeolicus} PDB: 2xcu_A*

Probab=99.76  E-value=1.6e-18  Score=149.36  Aligned_cols=128  Identities=9%  Similarity=0.070  Sum_probs=107.7

Q ss_pred             CCCceEEEEEcCCccH-HHHHHHHHHcCCC--------CcEEEeCCCChhHHHHHHHhccEEEEcCC-CccccHHHHHHH
Q 027511            1 MRVKVRFIVGGDGPKR-VRLEEMREKHSLQ--------DRVEMLGAVPHAQVRSVLISGHIFLNSSL-TEAFCIAILEAA   70 (222)
Q Consensus         1 ~~p~~~lvi~G~g~~~-~~l~~~~~~~~l~--------~~V~~~g~v~~~~~~~ll~~adv~v~~s~-~E~~g~~ilEAm   70 (222)
                      ++|+++|+|+|+|+.+ ++++++++++++.        ++|.+.|..  +++..+|+.||+++.||. .|.+|++++|||
T Consensus       222 ~~p~~~lvivG~g~~~~~~l~~~~~~~gl~~~~~~~~~~~v~~~~~~--~dl~~~y~~aDv~vl~ss~~e~gg~~~lEAm  299 (374)
T 2xci_A          222 TYSSLKLILVPRHIENAKIFEKKARDFGFKTSFFENLEGDVILVDRF--GILKELYPVGKIAIVGGTFVNIGGHNLLEPT  299 (374)
T ss_dssp             TCTTCEEEEEESSGGGHHHHHHHHHHTTCCEEETTCCCSSEEECCSS--SCHHHHGGGEEEEEECSSSSSSCCCCCHHHH
T ss_pred             hCCCcEEEEECCCHHHHHHHHHHHHHCCCceEEecCCCCcEEEECCH--HHHHHHHHhCCEEEECCcccCCCCcCHHHHH
Confidence            3689999999999987 5899999999886        468888864  789999999999888765 477899999999


Q ss_pred             HhCCcEEEe-CCCCccccccC---CceEEeCCCHHHHHHHHHHHHhcCC--CCCHHHHHHHHHhcCC
Q 027511           71 SCGLLTVST-RVGGVPEVLPD---DMVVLAEPDPGDMVLAIRKAISLLP--KIDPQVMHERMKKLYN  131 (222)
Q Consensus        71 a~G~PvVa~-~~gg~~e~i~~---~~~g~~~~~~~~la~~i~~ll~~~~--~~~~~~~~~~~~~~fs  131 (222)
                      |||+|||++ +.++.+|++.+   .+.++...|+++++++|.+++++ +  ..++.++++.+.++++
T Consensus       300 A~G~PVI~~~~~~~~~e~~~~~~~~G~l~~~~d~~~La~ai~~ll~d-~~r~~mg~~ar~~~~~~~g  365 (374)
T 2xci_A          300 CWGIPVIYGPYTHKVNDLKEFLEKEGAGFEVKNETELVTKLTELLSV-KKEIKVEEKSREIKGCYLE  365 (374)
T ss_dssp             TTTCCEEECSCCTTSHHHHHHHHHTTCEEECCSHHHHHHHHHHHHHS-CCCCCHHHHHHHHHHHHHH
T ss_pred             HhCCCEEECCCccChHHHHHHHHHCCCEEEeCCHHHHHHHHHHHHhH-HHHHHHHHHHHHHHHhccc
Confidence            999999974 78998987753   34556667999999999999998 7  6788888888877554

>3nb0_A Glycogen [starch] synthase isoform 2; glycogen synthase, glucose-6-phosphate, yeast, allosteric AC transferase; HET: G6P; 2.41A {Saccharomyces cerevisiae} PDB: 3rt1_A* 3nch_A 3naz_A 3o3c_A* 3rsz_A*

Probab=99.74  E-value=4.2e-18  Score=154.65  Aligned_cols=136  Identities=13%  Similarity=0.143  Sum_probs=102.9

Q ss_pred             HHHHHHHHHHcCCCCc------EEEe-CCCChh------HHHHHHHhccEEEEcCCCccccHHHHHHHHhCCcEEEeCCC
Q 027511           16 RVRLEEMREKHSLQDR------VEML-GAVPHA------QVRSVLISGHIFLNSSLTEAFCIAILEAASCGLLTVSTRVG   82 (222)
Q Consensus        16 ~~~l~~~~~~~~l~~~------V~~~-g~v~~~------~~~~ll~~adv~v~~s~~E~~g~~ilEAma~G~PvVa~~~g   82 (222)
                      .+.+...++++++.++      |.|+ ++++..      ++..+|++||+||+||.+|+||++++||||||+|||+++.|
T Consensus       472 ~D~Il~~~r~l~L~N~~~drVKVIf~P~~L~~~d~lf~~d~~~~~~~advfV~PS~~EgfGl~~LEAmA~G~PvI~s~~g  551 (725)
T 3nb0_A          472 NDLILNKIRQVQLFNSPSDRVKMIFHPEFLNANNPILGLDYDEFVRGCHLGVFPSYYEPWGYTPAECTVMGVPSITTNVS  551 (725)
T ss_dssp             GCHHHHHHHHHTCCCCTTCSEEEEECCSCCCTTCSSSCCCHHHHHHHCSEEECCCSSBSSCHHHHHHHHTTCCEEEETTB
T ss_pred             ccHHHHHHHhcCCCCCcCCceeEEEeccccCCCCccchhHHHHHHhhceEEEeccccCCCCHHHHHHHHcCCCEEEeCCC
Confidence            3566777777777665      5555 666665      59999999999999999999999999999999999999999


Q ss_pred             CccccccCCc-------eEE-e-C---CCHHHHHHHHHHHHhc----CC--CCCHHHHHHHHHhcCCHHHHHHHHHHHHH
Q 027511           83 GVPEVLPDDM-------VVL-A-E---PDPGDMVLAIRKAISL----LP--KIDPQVMHERMKKLYNWHDVAKRTEIVYD  144 (222)
Q Consensus        83 g~~e~i~~~~-------~g~-~-~---~~~~~la~~i~~ll~~----~~--~~~~~~~~~~~~~~fs~~~~~~~~~~~~~  144 (222)
                      |+.|++.++.       +|+ + .   .++++++++|.+++..    .+  +....++..+..+.|+|+.++++|.++|+
T Consensus       552 G~~d~V~dg~~~~~~~~tG~lV~~rd~~d~ee~aeaLa~aL~~f~~~d~~~r~~mr~~ar~~A~~FSWe~iA~~Yl~~Ye  631 (725)
T 3nb0_A          552 GFGSYMEDLIETNQAKDYGIYIVDRRFKAPDESVEQLVDYMEEFVKKTRRQRINQRNATEALSDLLDWKRMGLEYVKARQ  631 (725)
T ss_dssp             HHHHHHHTTSCHHHHHHTTEEEECCSSSCHHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHGGGGGBHHHHHHHHHHHHH
T ss_pred             ChhhhhhccccccCCCCceEEEeCCCCCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence            9999998752       343 3 2   2667777666666642    22  22233333445578999999999999999


Q ss_pred             HHhcCCC
Q 027511          145 RALECPN  151 (222)
Q Consensus       145 ~~~~~~~  151 (222)
                      .++....
T Consensus       632 ~aL~~~~  638 (725)
T 3nb0_A          632 LALRRGY  638 (725)
T ss_dssp             HHHHHHC
T ss_pred             HHHhhcc
Confidence            9886443

>3beo_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, allosteric, regulation, isomerase; HET: UD1 UDP; 1.70A {Bacillus anthracis} PDB: 1o6c_A

Probab=99.74  E-value=2.4e-18  Score=146.73  Aligned_cols=134  Identities=12%  Similarity=0.042  Sum_probs=103.7

Q ss_pred             CCceEEEEEcCCccHHHHHHHHHHc-CCCCcEEEeCCCChhHHHHHHHhccEEEEcCCCccccHHHHHHHHhCCcEEEeC
Q 027511            2 RVKVRFIVGGDGPKRVRLEEMREKH-SLQDRVEMLGAVPHAQVRSVLISGHIFLNSSLTEAFCIAILEAASCGLLTVSTR   80 (222)
Q Consensus         2 ~p~~~lvi~G~g~~~~~l~~~~~~~-~l~~~V~~~g~v~~~~~~~ll~~adv~v~~s~~E~~g~~ilEAma~G~PvVa~~   80 (222)
                      +|++++++ |.|+.. .+++.++++ +..++|.|+|+++..++..+|+.||++|.||     |.+++|||+||+|||+++
T Consensus       236 ~~~~~~i~-~~g~~~-~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~ad~~v~~s-----g~~~lEA~a~G~Pvi~~~  308 (375)
T 3beo_A          236 HEDVQVVY-PVHMNP-VVRETANDILGDYGRIHLIEPLDVIDFHNVAARSYLMLTDS-----GGVQEEAPSLGVPVLVLR  308 (375)
T ss_dssp             CTTEEEEE-ECCSCH-HHHHHHHHHHTTCTTEEEECCCCHHHHHHHHHTCSEEEECC-----HHHHHHHHHHTCCEEECS
T ss_pred             CCCeEEEE-eCCCCH-HHHHHHHHHhhccCCEEEeCCCCHHHHHHHHHhCcEEEECC-----CChHHHHHhcCCCEEEec
Confidence            57888655 666543 344444443 4346899999999999999999999999998     677999999999999996


Q ss_pred             C-CCccccccCCceEE-eCCCHHHHHHHHHHHHhcCC--CCCHHHHHHHHHhcCCHHHHHHHHHHHHH
Q 027511           81 V-GGVPEVLPDDMVVL-AEPDPGDMVLAIRKAISLLP--KIDPQVMHERMKKLYNWHDVAKRTEIVYD  144 (222)
Q Consensus        81 ~-gg~~e~i~~~~~g~-~~~~~~~la~~i~~ll~~~~--~~~~~~~~~~~~~~fs~~~~~~~~~~~~~  144 (222)
                      . |+.+|++.++ +|+ +++|+++++++|.+++++++  ..++.++++.. +.|+|+.+++.+.++++
T Consensus       309 ~~~~~~e~v~~g-~g~~v~~d~~~la~~i~~ll~~~~~~~~~~~~~~~~~-~~~~~~~i~~~~~~~~~  374 (375)
T 3beo_A          309 DTTERPEGIEAG-TLKLAGTDEETIFSLADELLSDKEAHDKMSKASNPYG-DGRASERIVEAILKHFN  374 (375)
T ss_dssp             SCCSCHHHHHTT-SEEECCSCHHHHHHHHHHHHHCHHHHHHHCCCCCTTC-CSCHHHHHHHHHHHHTT
T ss_pred             CCCCCceeecCC-ceEEcCCCHHHHHHHHHHHHhChHhHhhhhhcCCCCC-CCcHHHHHHHHHHHHhh
Confidence            4 9999999888 555 44699999999999999865  33333333333 57999999998887653

>1f0k_A MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol...; rossmann fold, transferase; 1.90A {Escherichia coli} SCOP: c.87.1.2 PDB: 1nlm_A*

Probab=99.73  E-value=4.5e-18  Score=144.54  Aligned_cols=133  Identities=9%  Similarity=0.006  Sum_probs=107.6

Q ss_pred             ceE-EEEEcCCccHHHHHHHHHHcCCCCcEEEeCCCChhHHHHHHHhccEEEEcCCCccccHHHHHHHHhCCcEEEeCCC
Q 027511            4 KVR-FIVGGDGPKRVRLEEMREKHSLQDRVEMLGAVPHAQVRSVLISGHIFLNSSLTEAFCIAILEAASCGLLTVSTRVG   82 (222)
Q Consensus         4 ~~~-lvi~G~g~~~~~l~~~~~~~~l~~~V~~~g~v~~~~~~~ll~~adv~v~~s~~E~~g~~ilEAma~G~PvVa~~~g   82 (222)
                      +++ ++++|+|+ .++++++++++++. +|.|+|++  +++..+|+.||++|.||.    |++++|||+||+|||+++.+
T Consensus       212 ~~~~l~i~G~~~-~~~l~~~~~~~~~~-~v~~~g~~--~~~~~~~~~ad~~v~~sg----~~~~~EAma~G~Pvi~~~~~  283 (364)
T 1f0k_A          212 SVTIWHQSGKGS-QQSVEQAYAEAGQP-QHKVTEFI--DDMAAAYAWADVVVCRSG----ALTVSEIAAAGLPALFVPFQ  283 (364)
T ss_dssp             GEEEEEECCTTC-HHHHHHHHHHTTCT-TSEEESCC--SCHHHHHHHCSEEEECCC----HHHHHHHHHHTCCEEECCCC
T ss_pred             CcEEEEEcCCch-HHHHHHHHhhcCCC-ceEEecch--hhHHHHHHhCCEEEECCc----hHHHHHHHHhCCCEEEeeCC
Confidence            567 57789887 57888888888874 79999998  789999999999999983    99999999999999999999


Q ss_pred             Ccc--------ccccCCceEEeCC--C--HHHHHHHHHHHHhcCC--CCCHHHHHHHHHhcCCHHHHHHHHHHHHHHHhc
Q 027511           83 GVP--------EVLPDDMVVLAEP--D--PGDMVLAIRKAISLLP--KIDPQVMHERMKKLYNWHDVAKRTEIVYDRALE  148 (222)
Q Consensus        83 g~~--------e~i~~~~~g~~~~--~--~~~la~~i~~ll~~~~--~~~~~~~~~~~~~~fs~~~~~~~~~~~~~~~~~  148 (222)
                      |.+        +++.++. |+..+  |  +++++++|.++  +++  ..++.++++.+ +.|+|+.++++++++|++...
T Consensus       284 g~~~~q~~~~~~~~~~g~-g~~~~~~d~~~~~la~~i~~l--~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~y~~~~~  359 (364)
T 1f0k_A          284 HKDRQQYWNALPLEKAGA-AKIIEQPQLSVDAVANTLAGW--SRETLLTMAERARAAS-IPDATERVANEVSRVARALEH  359 (364)
T ss_dssp             CTTCHHHHHHHHHHHTTS-EEECCGGGCCHHHHHHHHHTC--CHHHHHHHHHHHHHTC-CTTHHHHHHHHHHHHHTTC--
T ss_pred             CCchhHHHHHHHHHhCCc-EEEeccccCCHHHHHHHHHhc--CHHHHHHHHHHHHHhh-ccCHHHHHHHHHHHHHHHHHh
Confidence            875        4666666 55443  5  89999999988  444  45566666554 589999999999999976543

>1vgv_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, isomerase; HET: UD1; 2.31A {Escherichia coli} SCOP: c.87.1.3 PDB: 1f6d_A*

Probab=99.72  E-value=4.6e-19  Score=151.72  Aligned_cols=140  Identities=11%  Similarity=0.020  Sum_probs=106.5

Q ss_pred             CCceEEEEE-cCCc-cHHHHHHHHHHcCCCCcEEEeCCCChhHHHHHHHhccEEEEcCCCccccHHHHHHHHhCCcEEEe
Q 027511            2 RVKVRFIVG-GDGP-KRVRLEEMREKHSLQDRVEMLGAVPHAQVRSVLISGHIFLNSSLTEAFCIAILEAASCGLLTVST   79 (222)
Q Consensus         2 ~p~~~lvi~-G~g~-~~~~l~~~~~~~~l~~~V~~~g~v~~~~~~~ll~~adv~v~~s~~E~~g~~ilEAma~G~PvVa~   79 (222)
                      +|+++|+++ |+++ .++.+++++.   ..++|.|+|+++.+++..+|+.||++|.||     |.+++|||+||+|||++
T Consensus       236 ~~~~~l~i~~g~~~~~~~~l~~~~~---~~~~v~~~g~~~~~~~~~~~~~ad~~v~~S-----g~~~lEA~a~G~PvI~~  307 (384)
T 1vgv_A          236 HQDIQIVYPVHLNPNVREPVNRILG---HVKNVILIDPQEYLPFVWLMNHAWLILTDS-----GGIQEEAPSLGKPVLVM  307 (384)
T ss_dssp             CTTEEEEEECCBCHHHHHHHHHHHT---TCTTEEEECCCCHHHHHHHHHHCSEEEESS-----STGGGTGGGGTCCEEEE
T ss_pred             CCCeEEEEEcCCCHHHHHHHHHHhh---cCCCEEEeCCCCHHHHHHHHHhCcEEEECC-----cchHHHHHHcCCCEEEc
Confidence            578999886 5443 3445555432   236899999998899999999999999999     44589999999999999


Q ss_pred             CC-CCccccccCCceEEeCCCHHHHHHHHHHHHhcCC--CCCHHHHHHHHHhcCCHHHHHHHHHHHHHHHhcCC
Q 027511           80 RV-GGVPEVLPDDMVVLAEPDPGDMVLAIRKAISLLP--KIDPQVMHERMKKLYNWHDVAKRTEIVYDRALECP  150 (222)
Q Consensus        80 ~~-gg~~e~i~~~~~g~~~~~~~~la~~i~~ll~~~~--~~~~~~~~~~~~~~fs~~~~~~~~~~~~~~~~~~~  150 (222)
                      +. |+.+|++.++.+.++.+|+++++++|.+++++++  ..++.++++. ...|+|+.+++.+.++|++..+..
T Consensus       308 ~~~~~~~e~v~~g~g~lv~~d~~~la~~i~~ll~d~~~~~~~~~~~~~~-~~~~~~~~i~~~~~~~~~~~~~~~  380 (384)
T 1vgv_A          308 RDTTERPEAVTAGTVRLVGTDKQRIVEEVTRLLKDENEYQAMSRAHNPY-GDGQACSRILEALKNNRISLGSHH  380 (384)
T ss_dssp             SSCCSCHHHHHHTSEEEECSSHHHHHHHHHHHHHCHHHHHHHHSSCCTT-CCSCHHHHHHHHHHHTCCCC----
T ss_pred             cCCCCcchhhhCCceEEeCCCHHHHHHHHHHHHhChHHHhhhhhccCCC-cCCCHHHHHHHHHHHHHHhhcccc
Confidence            87 9999999888444455699999999999999865  3334334333 367999999999998887766543

>3t5t_A Putative glycosyltransferase; GTB fold, pseudoglycosyltransferase; 1.70A {Streptomyces hygroscopicus} PDB: 4f97_A* 4f96_B* 4f9f_A* 3t7d_A*

Probab=99.68  E-value=4.2e-16  Score=138.24  Aligned_cols=141  Identities=13%  Similarity=0.095  Sum_probs=111.5

Q ss_pred             ceEEEEEc-----CCccHHH----HHHHHHHc----CCCCcEEEeCCCChhHHHHHHHhccEEEEcCCCccccHHHHHHH
Q 027511            4 KVRFIVGG-----DGPKRVR----LEEMREKH----SLQDRVEMLGAVPHAQVRSVLISGHIFLNSSLTEAFCIAILEAA   70 (222)
Q Consensus         4 ~~~lvi~G-----~g~~~~~----l~~~~~~~----~l~~~V~~~g~v~~~~~~~ll~~adv~v~~s~~E~~g~~ilEAm   70 (222)
                      ++.|+++|     +++.+.+    +++++.+.    +.. .|.|+|.++.+++..+|+.||++|+||..|+||++++|||
T Consensus       314 ~v~Lv~Vg~psr~~~~~y~~l~~~l~~lv~~in~~~g~~-~V~f~g~v~~~el~aly~~ADv~vv~SlrEGfgLv~~Eam  392 (496)
T 3t5t_A          314 KTRMLVRMNPNRLYVPANADYVHRVETAVAEANAELGSD-TVRIDNDNDVNHTIACFRRADLLIFNSTVDGQNLSTFEAP  392 (496)
T ss_dssp             TEEEEEEEECCCTTSHHHHHHHHHHHHHHHHHHHHHCTT-SEEEEECCCHHHHHHHHHHCSEEEECCSSBSCCSHHHHHH
T ss_pred             eEEEEEEECCCCCCchHHHHHHHHHHHHHHHhccccCCc-CEEEeCCCCHHHHHHHHHhccEEEECcccccCChhHHHHH
Confidence            36688875     4444444    44444333    332 6999999999999999999999999999999999999999


Q ss_pred             HhC---CcEEEeCCCCccccccCCceEEeCC-CHHHHHHHHHHHHhcCC---CCCHHHHHHHHHhcCCHHHHHHHHHHHH
Q 027511           71 SCG---LLTVSTRVGGVPEVLPDDMVVLAEP-DPGDMVLAIRKAISLLP---KIDPQVMHERMKKLYNWHDVAKRTEIVY  143 (222)
Q Consensus        71 a~G---~PvVa~~~gg~~e~i~~~~~g~~~~-~~~~la~~i~~ll~~~~---~~~~~~~~~~~~~~fs~~~~~~~~~~~~  143 (222)
                      |||   .|+|.|+.+|..+.+.++. .++.| |+++++++|.++++++.   +.+..+.++.+ ..++....++.+.+-+
T Consensus       393 A~~~~~g~lVlSe~aGa~~~l~~~a-llVnP~D~~~lA~AI~~aL~m~~~er~~r~~~~~~~V-~~~d~~~W~~~fl~~L  470 (496)
T 3t5t_A          393 LVNERDADVILSETCGAAEVLGEYC-RSVNPFDLVEQAEAISAALAAGPRQRAEAAARRRDAA-RPWTLEAWVQAQLDGL  470 (496)
T ss_dssp             HHCSSCCEEEEETTBTTHHHHGGGS-EEECTTBHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH-TTCBHHHHHHHHHHHH
T ss_pred             HhCCCCCCEEEeCCCCCHHHhCCCE-EEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHH-HHCCHHHHHHHHHHHH
Confidence            997   8999999999888885443 34555 99999999999999875   44556666666 5599999999988888


Q ss_pred             HHHh
Q 027511          144 DRAL  147 (222)
Q Consensus       144 ~~~~  147 (222)
                      +...
T Consensus       471 ~~~~  474 (496)
T 3t5t_A          471 AADH  474 (496)
T ss_dssp             HHHH
T ss_pred             hhcc
Confidence            7664

>1v4v_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, two domains, homodimer, riken structural genomics/proteomics initiative, RSGI; HET: MSE; 1.80A {Thermus thermophilus} SCOP: c.87.1.3

Probab=99.60  E-value=2.6e-15  Score=128.18  Aligned_cols=136  Identities=15%  Similarity=0.142  Sum_probs=103.7

Q ss_pred             CCceEEEEE-cCCc-cHHHHHHHHHHcCCCCcEEEeCCCChhHHHHHHHhccEEEEcCCCccccHHHHHHHHhCCcEEEe
Q 027511            2 RVKVRFIVG-GDGP-KRVRLEEMREKHSLQDRVEMLGAVPHAQVRSVLISGHIFLNSSLTEAFCIAILEAASCGLLTVST   79 (222)
Q Consensus         2 ~p~~~lvi~-G~g~-~~~~l~~~~~~~~l~~~V~~~g~v~~~~~~~ll~~adv~v~~s~~E~~g~~ilEAma~G~PvVa~   79 (222)
                      +|+++++++ |+++ .++.+++++.   ..++|.|+|+++..++..+|+.||++|.+|  +  |+ ++|||+||+|||++
T Consensus       228 ~~~~~lv~~~g~~~~~~~~l~~~~~---~~~~v~~~g~~g~~~~~~~~~~ad~~v~~S--~--g~-~lEA~a~G~PvI~~  299 (376)
T 1v4v_A          228 FPHLTFVYPVHLNPVVREAVFPVLK---GVRNFVLLDPLEYGSMAALMRASLLLVTDS--G--GL-QEEGAALGVPVVVL  299 (376)
T ss_dssp             CTTSEEEEECCSCHHHHHHHHHHHT---TCTTEEEECCCCHHHHHHHHHTEEEEEESC--H--HH-HHHHHHTTCCEEEC
T ss_pred             CCCeEEEEECCCCHHHHHHHHHHhc---cCCCEEEECCCCHHHHHHHHHhCcEEEECC--c--CH-HHHHHHcCCCEEec
Confidence            578899886 7665 4566666553   236899999998889999999999999998  2  44 88999999999987


Q ss_pred             -CCCCccccccCCceEEeCCCHHHHHHHHHHHHhcCCCCCHHHHHHHHHhcCCHHHHHHHHHHHHHHHhc
Q 027511           80 -RVGGVPEVLPDDMVVLAEPDPGDMVLAIRKAISLLPKIDPQVMHERMKKLYNWHDVAKRTEIVYDRALE  148 (222)
Q Consensus        80 -~~gg~~e~i~~~~~g~~~~~~~~la~~i~~ll~~~~~~~~~~~~~~~~~~fs~~~~~~~~~~~~~~~~~  148 (222)
                       +.|+..+++.++.+.++..|+++++++|.+++++++  ...+.. ...+.|++...++++.+.+.+.+.
T Consensus       300 ~~~~~~~~~~~~g~g~lv~~d~~~la~~i~~ll~d~~--~~~~~~-~~~~~~~~~~~~~~i~~~i~~~~~  366 (376)
T 1v4v_A          300 RNVTERPEGLKAGILKLAGTDPEGVYRVVKGLLENPE--ELSRMR-KAKNPYGDGKAGLMVARGVAWRLG  366 (376)
T ss_dssp             SSSCSCHHHHHHTSEEECCSCHHHHHHHHHHHHTCHH--HHHHHH-HSCCSSCCSCHHHHHHHHHHHHTT
T ss_pred             cCCCcchhhhcCCceEECCCCHHHHHHHHHHHHhChH--hhhhhc-ccCCCCCCChHHHHHHHHHHHHhc
Confidence             578999988766444444699999999999998754  111111 123567777888888888888775

>3rhz_A GTF3, nucleotide sugar synthetase-like protein; glycosyltransferase, transferase; HET: UDP; 1.90A {Streptococcus parasanguinis} PDB: 3qkw_A*

Probab=99.59  E-value=1e-15  Score=130.40  Aligned_cols=123  Identities=8%  Similarity=-0.071  Sum_probs=97.0

Q ss_pred             CceEEEEEcCCccHHHHHHHHHHcCCCCcEEEeCCCChhHHHHHHHhccEEEEcCCC-------ccccHHHHHHHHhCCc
Q 027511            3 VKVRFIVGGDGPKRVRLEEMREKHSLQDRVEMLGAVPHAQVRSVLISGHIFLNSSLT-------EAFCIAILEAASCGLL   75 (222)
Q Consensus         3 p~~~lvi~G~g~~~~~l~~~~~~~~l~~~V~~~g~v~~~~~~~ll~~adv~v~~s~~-------E~~g~~ilEAma~G~P   75 (222)
                      |+++|+|+|+|+.+          .++ +|.|+|++|++++..+++++|+.+.....       ..+|.+++|+||||+|
T Consensus       198 ~~~~f~ivG~G~~~----------~l~-nV~f~G~~~~~el~~~l~~~~~~lv~~~~~~~~y~~~~~P~Kl~eymA~G~P  266 (339)
T 3rhz_A          198 YDIPLKVYTWQNVE----------LPQ-NVHKINYRPDEQLLMEMSQGGFGLVWMDDKDKEYQSLYCSYKLGSFLAAGIP  266 (339)
T ss_dssp             CSSCEEEEESCCCC----------CCT-TEEEEECCCHHHHHHHHHTEEEEECCCCGGGHHHHTTCCCHHHHHHHHHTCC
T ss_pred             CCCeEEEEeCCccc----------CcC-CEEEeCCCCHHHHHHHHHhCCEEEEECCCchhHHHHhcChHHHHHHHHcCCC
Confidence            78999999999875          244 89999999999999999988887765211       2468999999999999


Q ss_pred             EEEeCCCCccccccCCceEEeCCCHHHHHHHHHHHHhcCCCCCHHHHHHHHHhcCCHHHHHH
Q 027511           76 TVSTRVGGVPEVLPDDMVVLAEPDPGDMVLAIRKAISLLPKIDPQVMHERMKKLYNWHDVAK  137 (222)
Q Consensus        76 vVa~~~gg~~e~i~~~~~g~~~~~~~~la~~i~~ll~~~~~~~~~~~~~~~~~~fs~~~~~~  137 (222)
                      ||+++.|+..+++.++..|+..++.++++++|..+..+..+.++.++++.. +.+++..+++
T Consensus       267 VI~~~~~~~~~~v~~~~~G~~~~~~~e~~~~i~~l~~~~~~~m~~na~~~a-~~~~~~~f~k  327 (339)
T 3rhz_A          267 VIVQEGIANQELIENNGLGWIVKDVEEAIMKVKNVNEDEYIELVKNVRSFN-PILRKGFFTR  327 (339)
T ss_dssp             EEEETTCTTTHHHHHHTCEEEESSHHHHHHHHHHCCHHHHHHHHHHHHHHT-HHHHTTHHHH
T ss_pred             EEEccChhHHHHHHhCCeEEEeCCHHHHHHHHHHhCHHHHHHHHHHHHHHH-HHhhccHHHH
Confidence            999999999999999999998889999999998865432245555655543 3344444444

>3ot5_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, center for structural genomics of infec diseases, csgid, alpha beta; HET: PGE; 2.20A {Listeria monocytogenes}

Probab=99.31  E-value=9.7e-12  Score=108.04  Aligned_cols=136  Identities=13%  Similarity=0.116  Sum_probs=98.3

Q ss_pred             CCceEEEEE-cCCccHHHHHHHHHH-cCCCCcEEEeCCCChhHHHHHHHhccEEEEcCCCccccHHHHHHHHhCCcEEEe
Q 027511            2 RVKVRFIVG-GDGPKRVRLEEMREK-HSLQDRVEMLGAVPHAQVRSVLISGHIFLNSSLTEAFCIAILEAASCGLLTVST   79 (222)
Q Consensus         2 ~p~~~lvi~-G~g~~~~~l~~~~~~-~~l~~~V~~~g~v~~~~~~~ll~~adv~v~~s~~E~~g~~ilEAma~G~PvVa~   79 (222)
                      +|++++++. |.++   .+++.+++ ++..++|.++|+++..++..+|+.||++|.+|     |...+|||++|+|+|+.
T Consensus       255 ~~~~~~v~~~~~~~---~~~~~l~~~~~~~~~v~l~~~l~~~~~~~l~~~ad~vv~~S-----Gg~~~EA~a~g~PvV~~  326 (403)
T 3ot5_A          255 REDTELVYPMHLNP---AVREKAMAILGGHERIHLIEPLDAIDFHNFLRKSYLVFTDS-----GGVQEEAPGMGVPVLVL  326 (403)
T ss_dssp             CTTEEEEEECCSCH---HHHHHHHHHHTTCTTEEEECCCCHHHHHHHHHHEEEEEECC-----HHHHHHGGGTTCCEEEC
T ss_pred             CCCceEEEecCCCH---HHHHHHHHHhCCCCCEEEeCCCCHHHHHHHHHhcCEEEECC-----ccHHHHHHHhCCCEEEe
Confidence            588999987 5443   22333333 34456899999999899999999999999887     44448999999999998


Q ss_pred             -CCCCccccccCCceEEeCCCHHHHHHHHHHHHhcCCCCCHHHHHHHHHhcCCHHHHHHHHHHHHHHHhc
Q 027511           80 -RVGGVPEVLPDDMVVLAEPDPGDMVLAIRKAISLLPKIDPQVMHERMKKLYNWHDVAKRTEIVYDRALE  148 (222)
Q Consensus        80 -~~gg~~e~i~~~~~g~~~~~~~~la~~i~~ll~~~~~~~~~~~~~~~~~~fs~~~~~~~~~~~~~~~~~  148 (222)
                       +.|+.+|.+..+.+.++.+|++++++++.+++++++.  ..+. ......|.....++++.+++.+.+.
T Consensus       327 ~~~~~~~e~v~~g~~~lv~~d~~~l~~ai~~ll~~~~~--~~~m-~~~~~~~g~~~aa~rI~~~l~~~l~  393 (403)
T 3ot5_A          327 RDTTERPEGIEAGTLKLIGTNKENLIKEALDLLDNKES--HDKM-AQAANPYGDGFAANRILAAIKSHFE  393 (403)
T ss_dssp             CSSCSCHHHHHHTSEEECCSCHHHHHHHHHHHHHCHHH--HHHH-HHSCCTTCCSCHHHHHHHHHHHHHT
T ss_pred             cCCCcchhheeCCcEEEcCCCHHHHHHHHHHHHcCHHH--HHHH-HhhcCcccCCcHHHHHHHHHHHHhC
Confidence             7888889887775545555999999999999987541  1111 1122346666666777777766654

>3dzc_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, in diseases, isomerase, center for structural genomics of INFE diseases, csgid; 2.35A {Vibrio cholerae}

Probab=99.27  E-value=7.8e-12  Score=108.34  Aligned_cols=106  Identities=16%  Similarity=0.135  Sum_probs=84.3

Q ss_pred             CCceEEEEE-cCCccHHHHHHHHHH-cCCCCcEEEeCCCChhHHHHHHHhccEEEEcCCCccccHHHHHHHHhCCcEEEe
Q 027511            2 RVKVRFIVG-GDGPKRVRLEEMREK-HSLQDRVEMLGAVPHAQVRSVLISGHIFLNSSLTEAFCIAILEAASCGLLTVST   79 (222)
Q Consensus         2 ~p~~~lvi~-G~g~~~~~l~~~~~~-~~l~~~V~~~g~v~~~~~~~ll~~adv~v~~s~~E~~g~~ilEAma~G~PvVa~   79 (222)
                      +|++++++. |.++.   +++.+++ .+..++|.++++++..++..+|+.||++|.+|   + |+ .+|||++|+|||++
T Consensus       261 ~~~~~~v~~~g~~~~---~~~~l~~~~~~~~~v~~~~~lg~~~~~~l~~~ad~vv~~S---G-g~-~~EA~a~G~PvV~~  332 (396)
T 3dzc_A          261 HPECQILYPVHLNPN---VREPVNKLLKGVSNIVLIEPQQYLPFVYLMDRAHIILTDS---G-GI-QEEAPSLGKPVLVM  332 (396)
T ss_dssp             CTTEEEEEECCBCHH---HHHHHHHHTTTCTTEEEECCCCHHHHHHHHHHCSEEEESC---S-GG-GTTGGGGTCCEEEC
T ss_pred             CCCceEEEEeCCChH---HHHHHHHHHcCCCCEEEeCCCCHHHHHHHHHhcCEEEECC---c-cH-HHHHHHcCCCEEEc
Confidence            588999886 65532   2333333 34457899999998889999999999999998   2 33 38999999999998


Q ss_pred             -CCCCccccccCCceEEeCCCHHHHHHHHHHHHhcCC
Q 027511           80 -RVGGVPEVLPDDMVVLAEPDPGDMVLAIRKAISLLP  115 (222)
Q Consensus        80 -~~gg~~e~i~~~~~g~~~~~~~~la~~i~~ll~~~~  115 (222)
                       +.++.+|++..+.+.++.+|++++++++.+++++++
T Consensus       333 ~~~~~~~e~v~~G~~~lv~~d~~~l~~ai~~ll~d~~  369 (396)
T 3dzc_A          333 RETTERPEAVAAGTVKLVGTNQQQICDALSLLLTDPQ  369 (396)
T ss_dssp             CSSCSCHHHHHHTSEEECTTCHHHHHHHHHHHHHCHH
T ss_pred             cCCCcchHHHHcCceEEcCCCHHHHHHHHHHHHcCHH
Confidence             788888999888776666689999999999998753

>3otg_A CALG1; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD; 2.08A {Micromonospora echinospora} PDB: 3oth_A*

Probab=99.24  E-value=7e-12  Score=107.99  Aligned_cols=111  Identities=11%  Similarity=0.059  Sum_probs=86.6

Q ss_pred             CCCcEEEeCCCChhHHHHHHHhccEEEEcCCCccccHHHHHHHHhCCcEEEeCCCC----ccccccCCceEEeCC----C
Q 027511           28 LQDRVEMLGAVPHAQVRSVLISGHIFLNSSLTEAFCIAILEAASCGLLTVSTRVGG----VPEVLPDDMVVLAEP----D   99 (222)
Q Consensus        28 l~~~V~~~g~v~~~~~~~ll~~adv~v~~s~~E~~g~~ilEAma~G~PvVa~~~gg----~~e~i~~~~~g~~~~----~   99 (222)
                      ++++|.+.|++   ++..+|+.||++|..+    .+++++|||++|+|+|+...++    ..+.+.+...|+..+    |
T Consensus       290 ~~~~v~~~~~~---~~~~~l~~ad~~v~~~----g~~t~~Ea~a~G~P~v~~p~~~~q~~~~~~v~~~g~g~~~~~~~~~  362 (412)
T 3otg_A          290 VPANVRLESWV---PQAALLPHVDLVVHHG----GSGTTLGALGAGVPQLSFPWAGDSFANAQAVAQAGAGDHLLPDNIS  362 (412)
T ss_dssp             CCTTEEEESCC---CHHHHGGGCSEEEESC----CHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHHTSEEECCGGGCC
T ss_pred             CCCcEEEeCCC---CHHHHHhcCcEEEECC----chHHHHHHHHhCCCEEecCCchhHHHHHHHHHHcCCEEecCcccCC
Confidence            45789999998   4889999999999665    3479999999999999976654    566666666665433    7


Q ss_pred             HHHHHHHHHHHHhcCC-CCCHHHHHHHHHhcCCHHHHHHHHHHHHHH
Q 027511          100 PGDMVLAIRKAISLLP-KIDPQVMHERMKKLYNWHDVAKRTEIVYDR  145 (222)
Q Consensus       100 ~~~la~~i~~ll~~~~-~~~~~~~~~~~~~~fs~~~~~~~~~~~~~~  145 (222)
                      +++++++|.+++++++ +....+..+.....++++.+++.+++++.+
T Consensus       363 ~~~l~~ai~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~  409 (412)
T 3otg_A          363 PDSVSGAAKRLLAEESYRAGARAVAAEIAAMPGPDEVVRLLPGFASR  409 (412)
T ss_dssp             HHHHHHHHHHHHHCHHHHHHHHHHHHHHHHSCCHHHHHTTHHHHHC-
T ss_pred             HHHHHHHHHHHHhCHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHhcc
Confidence            8999999999999877 334444555566778999999999888743

>3q3e_A HMW1C-like glycosyltransferase; N-glycosylation; 2.10A {Actinobacillus pleuropneumoniae serovaorganism_taxid} PDB: 3q3h_A* 3q3i_A

Probab=99.21  E-value=3.8e-12  Score=115.04  Aligned_cols=143  Identities=15%  Similarity=0.058  Sum_probs=100.0

Q ss_pred             CCceEEE--EEcC--CccHHHHHHHHHHcCCCCcEEEeCCCChhHHHHHHHhccEEEEcCCCccccHHHHHHHHhCCcEE
Q 027511            2 RVKVRFI--VGGD--GPKRVRLEEMREKHSLQDRVEMLGAVPHAQVRSVLISGHIFLNSSLTEAFCIAILEAASCGLLTV   77 (222)
Q Consensus         2 ~p~~~lv--i~G~--g~~~~~l~~~~~~~~l~~~V~~~g~v~~~~~~~ll~~adv~v~~s~~E~~g~~ilEAma~G~PvV   77 (222)
                      .|+..++  +.|+  |.....++ .+.+.|+.++|.|+|.++.++....|+.+|+++.|+... .|++.+|||+||+|||
T Consensus       468 vP~s~L~l~~~g~~~g~~~~~~~-~~~~~GI~~Rv~F~g~~p~~e~la~y~~aDIfLDpfpy~-GgtTtlEALwmGVPVV  545 (631)
T 3q3e_A          468 AKVKVHFHFALGQSNGITHPYVE-RFIKSYLGDSATAHPHSPYHQYLRILHNCDMMVNPFPFG-NTNGIIDMVTLGLVGV  545 (631)
T ss_dssp             CSSEEEEEEEESSCCGGGHHHHH-HHHHHHHGGGEEEECCCCHHHHHHHHHTCSEEECCSSSC-CSHHHHHHHHTTCCEE
T ss_pred             CCCcEEEEEecCCCchhhHHHHH-HHHHcCCCccEEEcCCCCHHHHHHHHhcCcEEEeCCccc-CChHHHHHHHcCCCEE
Confidence            4666553  3563  34444444 455678888999999999999999999999999998664 4999999999999999


Q ss_pred             EeCCCCcccccc------CCceE-EeCCCHHHHHHHHHHHHhcCC--CCCHHHHHHHHHh--cCCHHHHHHHHHHHHHHH
Q 027511           78 STRVGGVPEVLP------DDMVV-LAEPDPGDMVLAIRKAISLLP--KIDPQVMHERMKK--LYNWHDVAKRTEIVYDRA  146 (222)
Q Consensus        78 a~~~gg~~e~i~------~~~~g-~~~~~~~~la~~i~~ll~~~~--~~~~~~~~~~~~~--~fs~~~~~~~~~~~~~~~  146 (222)
                      +...+++.+-+.      -|... ++..|.+++++...++.++++  ..+.++.+++...  .|+  ...+++++.|+++
T Consensus       546 Tl~G~~~asRvgaSlL~~~GLpE~LIA~d~eeYv~~Av~La~D~~~l~~LR~~Lr~~~~~spLFd--~~~~~~e~~ye~~  623 (631)
T 3q3e_A          546 CKTGAEVHEHIDEGLFKRLGLPEWLIANTVDEYVERAVRLAENHQERLELRRYIIENNGLNTLFT--GDPRPMGQVFLEK  623 (631)
T ss_dssp             EECCSSHHHHHHHHHHHHTTCCGGGEESSHHHHHHHHHHHHHCHHHHHHHHHHHHHSCCHHHHTC--SCCTHHHHHHHHH
T ss_pred             eccCCcHHHHhHHHHHHhcCCCcceecCCHHHHHHHHHHHhCCHHHHHHHHHHHHHHhhhCCCcc--hhHHHHHHHHHHH
Confidence            987766655443      23333 366789999999999999976  3333333333222  333  3445666666555


Q ss_pred             hc
Q 027511          147 LE  148 (222)
Q Consensus       147 ~~  148 (222)
                      ++
T Consensus       624 ~~  625 (631)
T 3q3e_A          624 LN  625 (631)
T ss_dssp             HH
T ss_pred             HH
Confidence            43

>2iyf_A OLED, oleandomycin glycosyltransferase; antibiotic resistance, glycosylation, enzyme, macrolide, carbohydrate; HET: ERY UDP; 1.7A {Streptomyces antibioticus}

Probab=99.21  E-value=1.3e-11  Score=107.17  Aligned_cols=131  Identities=12%  Similarity=0.022  Sum_probs=91.6

Q ss_pred             CceEE-EEEcCCccHHHHHHHHHHcCCCCcEEEeCCCChhHHHHHHHhccEEEEcCCCccccHHHHHHHHhCCcEEEeCC
Q 027511            3 VKVRF-IVGGDGPKRVRLEEMREKHSLQDRVEMLGAVPHAQVRSVLISGHIFLNSSLTEAFCIAILEAASCGLLTVSTRV   81 (222)
Q Consensus         3 p~~~l-vi~G~g~~~~~l~~~~~~~~l~~~V~~~g~v~~~~~~~ll~~adv~v~~s~~E~~g~~ilEAma~G~PvVa~~~   81 (222)
                      |++++ +++|+|+..+.++      .++++|.+.|++++.   .+|..+|++|..+    .+++++|||++|+|+|+...
T Consensus       261 ~~~~~~~~~G~~~~~~~l~------~~~~~v~~~~~~~~~---~~l~~ad~~v~~~----G~~t~~Ea~~~G~P~i~~p~  327 (430)
T 2iyf_A          261 PGWHLVLQIGRKVTPAELG------ELPDNVEVHDWVPQL---AILRQADLFVTHA----GAGGSQEGLATATPMIAVPQ  327 (430)
T ss_dssp             TTEEEEEECC---CGGGGC------SCCTTEEEESSCCHH---HHHTTCSEEEECC----CHHHHHHHHHTTCCEEECCC
T ss_pred             CCeEEEEEeCCCCChHHhc------cCCCCeEEEecCCHH---HHhhccCEEEECC----CccHHHHHHHhCCCEEECCC
Confidence            56777 5678876544332      246789999999765   7899999999754    24789999999999999987


Q ss_pred             CC----ccccccCCceEEeCC----CHHHHHHHHHHHHhcCC-CCCHHHHHHHHHhcCCHHHHHHHHHHHHHHH
Q 027511           82 GG----VPEVLPDDMVVLAEP----DPGDMVLAIRKAISLLP-KIDPQVMHERMKKLYNWHDVAKRTEIVYDRA  146 (222)
Q Consensus        82 gg----~~e~i~~~~~g~~~~----~~~~la~~i~~ll~~~~-~~~~~~~~~~~~~~fs~~~~~~~~~~~~~~~  146 (222)
                      ++    ..+.+.+.+.|+..+    ++++++++|.+++++++ +....+..+...+.++++.+++.+++++++.
T Consensus       328 ~~~q~~~a~~~~~~g~g~~~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~  401 (430)
T 2iyf_A          328 AVDQFGNADMLQGLGVARKLATEEATADLLRETALALVDDPEVARRLRRIQAEMAQEGGTRRAADLIEAELPAR  401 (430)
T ss_dssp             SHHHHHHHHHHHHTTSEEECCCC-CCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCHHHHHHHHHHTTSCC-
T ss_pred             ccchHHHHHHHHHcCCEEEcCCCCCCHHHHHHHHHHHHcCHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHhhcc
Confidence            65    345555555565443    78999999999998865 3233333334445678888888887776544

>4fzr_A SSFS6; structural genomics, PSI-biology, protein structure initiati enzyme discovery for natural product biosynthesis, natPro; 2.40A {Streptomyces SP} PDB: 4g2t_A*

Probab=99.18  E-value=1.9e-11  Score=105.14  Aligned_cols=124  Identities=15%  Similarity=0.127  Sum_probs=87.9

Q ss_pred             ceEEEEEcCCccHHHHHHHHHHcCCCCcEEEeCCCChhHHHHHHHhccEEEEcCCCccccHHHHHHHHhCCcEEEeC---
Q 027511            4 KVRFIVGGDGPKRVRLEEMREKHSLQDRVEMLGAVPHAQVRSVLISGHIFLNSSLTEAFCIAILEAASCGLLTVSTR---   80 (222)
Q Consensus         4 ~~~lvi~G~g~~~~~l~~~~~~~~l~~~V~~~g~v~~~~~~~ll~~adv~v~~s~~E~~g~~ilEAma~G~PvVa~~---   80 (222)
                      +++++++|+++..+.++      .++++|.+.|+++   ...+|..||++|.    .+.+.+++|||++|+|+|+..   
T Consensus       264 ~~~~v~~~~~~~~~~l~------~~~~~v~~~~~~~---~~~ll~~ad~~v~----~gG~~t~~Ea~~~G~P~v~~p~~~  330 (398)
T 4fzr_A          264 GFEVVVAVSDKLAQTLQ------PLPEGVLAAGQFP---LSAIMPACDVVVH----HGGHGTTLTCLSEGVPQVSVPVIA  330 (398)
T ss_dssp             TCEEEECCCC--------------CCTTEEEESCCC---HHHHGGGCSEEEE----CCCHHHHHHHHHTTCCEEECCCSG
T ss_pred             CCEEEEEeCCcchhhhc------cCCCcEEEeCcCC---HHHHHhhCCEEEe----cCCHHHHHHHHHhCCCEEecCCch
Confidence            56788888776543333      3467999999985   6788999999994    455789999999999999954   


Q ss_pred             -CCCccccccCCceEEeCC----CHHHHHHHHHHHHhcCC-CCCHHHHHHHHHhcCCHHHHHHHHH
Q 027511           81 -VGGVPEVLPDDMVVLAEP----DPGDMVLAIRKAISLLP-KIDPQVMHERMKKLYNWHDVAKRTE  140 (222)
Q Consensus        81 -~gg~~e~i~~~~~g~~~~----~~~~la~~i~~ll~~~~-~~~~~~~~~~~~~~fs~~~~~~~~~  140 (222)
                       ..+..+.+.+.+.|+..+    ++++++++|.++++++. +....+..+......+++.+++.++
T Consensus       331 ~q~~~a~~~~~~g~g~~~~~~~~~~~~l~~ai~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  396 (398)
T 4fzr_A          331 EVWDSARLLHAAGAGVEVPWEQAGVESVLAACARIRDDSSYVGNARRLAAEMATLPTPADIVRLIE  396 (398)
T ss_dssp             GGHHHHHHHHHTTSEEECC-------CHHHHHHHHHHCTHHHHHHHHHHHHHTTSCCHHHHHHHHT
T ss_pred             hHHHHHHHHHHcCCEEecCcccCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHHcCCCHHHHHHHHh
Confidence             446667777776665544    67999999999999877 4444555556667789888887764

>3tsa_A SPNG, NDP-rhamnosyltransferase; glycosyltransferase; HET: GLC; 1.70A {Saccharopolyspora spinosa} PDB: 3uyk_A* 3uyl_A*

Probab=99.17  E-value=2.8e-11  Score=103.72  Aligned_cols=130  Identities=12%  Similarity=0.067  Sum_probs=95.1

Q ss_pred             CCceEEEEEcCCccHHHHHHHHHHcCCCCcEEEeCCCChhHHHHHHHhccEEEEcCCCccccHHHHHHHHhCCcEEEeCC
Q 027511            2 RVKVRFIVGGDGPKRVRLEEMREKHSLQDRVEMLGAVPHAQVRSVLISGHIFLNSSLTEAFCIAILEAASCGLLTVSTRV   81 (222)
Q Consensus         2 ~p~~~lvi~G~g~~~~~l~~~~~~~~l~~~V~~~g~v~~~~~~~ll~~adv~v~~s~~E~~g~~ilEAma~G~PvVa~~~   81 (222)
                      +|+++++++|+++..+.+.      +++++|.+.|+++..+   ++..||++|.    ++.+.+++|||++|+|+|+...
T Consensus       248 ~p~~~~v~~~~~~~~~~l~------~~~~~v~~~~~~~~~~---ll~~ad~~v~----~~G~~t~~Ea~~~G~P~v~~p~  314 (391)
T 3tsa_A          248 LPGVEAVIAVPPEHRALLT------DLPDNARIAESVPLNL---FLRTCELVIC----AGGSGTAFTATRLGIPQLVLPQ  314 (391)
T ss_dssp             STTEEEEEECCGGGGGGCT------TCCTTEEECCSCCGGG---TGGGCSEEEE----CCCHHHHHHHHHTTCCEEECCC
T ss_pred             CCCeEEEEEECCcchhhcc------cCCCCEEEeccCCHHH---HHhhCCEEEe----CCCHHHHHHHHHhCCCEEecCC
Confidence            4789999998876543332      3567899999987654   5599999994    4456789999999999999544


Q ss_pred             ----CCccccccCCceEEeCC------CHHHHHHHHHHHHhcCC-CCCHHHHHHHHHhcCCHHHHHHHHHHHHH
Q 027511           82 ----GGVPEVLPDDMVVLAEP------DPGDMVLAIRKAISLLP-KIDPQVMHERMKKLYNWHDVAKRTEIVYD  144 (222)
Q Consensus        82 ----gg~~e~i~~~~~g~~~~------~~~~la~~i~~ll~~~~-~~~~~~~~~~~~~~fs~~~~~~~~~~~~~  144 (222)
                          .+..+.+.+.+.|+..+      +++++++++.++++++. +....+..+......+++.+++.++++..
T Consensus       315 ~~~q~~~a~~~~~~g~g~~~~~~~~~~~~~~l~~ai~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~  388 (391)
T 3tsa_A          315 YFDQFDYARNLAAAGAGICLPDEQAQSDHEQFTDSIATVLGDTGFAAAAIKLSDEITAMPHPAALVRTLENTAA  388 (391)
T ss_dssp             STTHHHHHHHHHHTTSEEECCSHHHHTCHHHHHHHHHHHHTCTHHHHHHHHHHHHHHTSCCHHHHHHHHHHC--
T ss_pred             cccHHHHHHHHHHcCCEEecCcccccCCHHHHHHHHHHHHcCHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHh
Confidence                34555566665554332      68999999999999877 44445555666778899888887776553

>3oti_A CALG3; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD C0T; 1.60A {Micromonospora echinospora} PDB: 3d0q_A* 3d0r_A*

Probab=98.98  E-value=6e-10  Score=95.80  Aligned_cols=127  Identities=13%  Similarity=0.104  Sum_probs=90.1

Q ss_pred             ceEEEEEcCCccHHHHHHHHHHcCCCCcEEEeCCCChhHHHHHHHhccEEEEcCCCccccHHHHHHHHhCCcEEE----e
Q 027511            4 KVRFIVGGDGPKRVRLEEMREKHSLQDRVEMLGAVPHAQVRSVLISGHIFLNSSLTEAFCIAILEAASCGLLTVS----T   79 (222)
Q Consensus         4 ~~~lvi~G~g~~~~~l~~~~~~~~l~~~V~~~g~v~~~~~~~ll~~adv~v~~s~~E~~g~~ilEAma~G~PvVa----~   79 (222)
                      +++++++|+++..+.++      .++++|.+.|+++   ..++|..||++|.    .+.+.++.|||++|+|+|+    .
T Consensus       263 ~~~~v~~~g~~~~~~l~------~~~~~v~~~~~~~---~~~ll~~ad~~v~----~~G~~t~~Eal~~G~P~v~~p~~~  329 (398)
T 3oti_A          263 DADFVLALGDLDISPLG------TLPRNVRAVGWTP---LHTLLRTCTAVVH----HGGGGTVMTAIDAGIPQLLAPDPR  329 (398)
T ss_dssp             SSEEEEECTTSCCGGGC------SCCTTEEEESSCC---HHHHHTTCSEEEE----CCCHHHHHHHHHHTCCEEECCCTT
T ss_pred             CCEEEEEECCcChhhhc------cCCCcEEEEccCC---HHHHHhhCCEEEE----CCCHHHHHHHHHhCCCEEEcCCCc
Confidence            46777777665432222      3567899999985   5678999999994    4556789999999999999    5


Q ss_pred             CCCCcc--ccccCCceEEeCCCHHHHHHHHHHHHhcCC-CCCHHHHHHHHHhcCCHHHHHHHHHHHH
Q 027511           80 RVGGVP--EVLPDDMVVLAEPDPGDMVLAIRKAISLLP-KIDPQVMHERMKKLYNWHDVAKRTEIVY  143 (222)
Q Consensus        80 ~~gg~~--e~i~~~~~g~~~~~~~~la~~i~~ll~~~~-~~~~~~~~~~~~~~fs~~~~~~~~~~~~  143 (222)
                      +..+..  +.+.+.+.|+..+..+.-.+.+.++++++. +....+..+......+++.+++.++++.
T Consensus       330 dq~~~a~~~~~~~~g~g~~~~~~~~~~~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~  396 (398)
T 3oti_A          330 DQFQHTAREAVSRRGIGLVSTSDKVDADLLRRLIGDESLRTAAREVREEMVALPTPAETVRRIVERI  396 (398)
T ss_dssp             CCSSCTTHHHHHHHTSEEECCGGGCCHHHHHHHHHCHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHH
T ss_pred             hhHHHHHHHHHHHCCCEEeeCCCCCCHHHHHHHHcCHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHh
Confidence            667788  888877777655422112333337888766 4445566666778899999998887764

>3ia7_A CALG4; glycosysltransferase, calicheamicin, enediyne, transf; 1.91A {Micromonospora echinospora}

Probab=98.95  E-value=9.1e-10  Score=94.20  Aligned_cols=111  Identities=19%  Similarity=0.113  Sum_probs=84.5

Q ss_pred             CCCcEEEeCCCChhHHHHHHHhccEEEEcCCCccccHHHHHHHHhCCcEEEeCC-----CCccccccCCceEEeCC----
Q 027511           28 LQDRVEMLGAVPHAQVRSVLISGHIFLNSSLTEAFCIAILEAASCGLLTVSTRV-----GGVPEVLPDDMVVLAEP----   98 (222)
Q Consensus        28 l~~~V~~~g~v~~~~~~~ll~~adv~v~~s~~E~~g~~ilEAma~G~PvVa~~~-----gg~~e~i~~~~~g~~~~----   98 (222)
                      ++++|.+.|++++.   ++|..||++|..+-    ..+++|||++|+|+|+...     .+..+.+.+.+.|...+    
T Consensus       279 ~~~~v~~~~~~~~~---~ll~~ad~~v~~~G----~~t~~Ea~~~G~P~v~~p~~~~~q~~~a~~~~~~g~g~~~~~~~~  351 (402)
T 3ia7_A          279 LPPNVEAHQWIPFH---SVLAHARACLTHGT----TGAVLEAFAAGVPLVLVPHFATEAAPSAERVIELGLGSVLRPDQL  351 (402)
T ss_dssp             CCTTEEEESCCCHH---HHHTTEEEEEECCC----HHHHHHHHHTTCCEEECGGGCGGGHHHHHHHHHTTSEEECCGGGC
T ss_pred             CCCcEEEecCCCHH---HHHhhCCEEEECCC----HHHHHHHHHhCCCEEEeCCCcccHHHHHHHHHHcCCEEEccCCCC
Confidence            45789999998765   89999999996553    4788999999999995443     45666666666665443    


Q ss_pred             CHHHHHHHHHHHHhcCC-CCCHHHHHHHHHhcCCHHHHHHHHHHHHHH
Q 027511           99 DPGDMVLAIRKAISLLP-KIDPQVMHERMKKLYNWHDVAKRTEIVYDR  145 (222)
Q Consensus        99 ~~~~la~~i~~ll~~~~-~~~~~~~~~~~~~~fs~~~~~~~~~~~~~~  145 (222)
                      +++++++++.+++++++ +....+..+......+++..++.+++++.+
T Consensus       352 ~~~~l~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~  399 (402)
T 3ia7_A          352 EPASIREAVERLAADSAVRERVRRMQRDILSSGGPARAADEVEAYLGR  399 (402)
T ss_dssp             SHHHHHHHHHHHHHCHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHcCHHHHHHHHHHHHHHhhCChHHHHHHHHHHHHhh
Confidence            78999999999999876 334455555666778888888888887754

>2o6l_A UDP-glucuronosyltransferase 2B7; drug metabolism, rossman, MAD, enzyme, nucleotide binding, sugar,UDP-glucuronosyltransferase, UGT; 1.80A {Homo sapiens}

Probab=98.93  E-value=9.7e-10  Score=83.64  Aligned_cols=82  Identities=13%  Similarity=0.104  Sum_probs=63.3

Q ss_pred             CCCcEEEeCCCChhHHHHHHHhccEEEEcCCCccccHHHHHHHHhCCcEEEeCCC----CccccccCCceEEeCC----C
Q 027511           28 LQDRVEMLGAVPHAQVRSVLISGHIFLNSSLTEAFCIAILEAASCGLLTVSTRVG----GVPEVLPDDMVVLAEP----D   99 (222)
Q Consensus        28 l~~~V~~~g~v~~~~~~~ll~~adv~v~~s~~E~~g~~ilEAma~G~PvVa~~~g----g~~e~i~~~~~g~~~~----~   99 (222)
                      ++++|.+.|++++.++..+ ..||++|..    +.++++.|||++|+|+|+....    +..+.+.+.+.|+..+    +
T Consensus        66 ~~~~v~~~~~~~~~~~l~~-~~ad~~I~~----~G~~t~~Ea~~~G~P~i~~p~~~~Q~~na~~l~~~g~g~~~~~~~~~  140 (170)
T 2o6l_A           66 LGLNTRLYKWIPQNDLLGH-PKTRAFITH----GGANGIYEAIYHGIPMVGIPLFADQPDNIAHMKARGAAVRVDFNTMS  140 (170)
T ss_dssp             CCTTEEEESSCCHHHHHTS-TTEEEEEEC----CCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHTTTSEEECCTTTCC
T ss_pred             CCCcEEEecCCCHHHHhcC-CCcCEEEEc----CCccHHHHHHHcCCCEEeccchhhHHHHHHHHHHcCCeEEeccccCC
Confidence            4568999999987544332 899999963    4468999999999999998774    3455666666665444    7


Q ss_pred             HHHHHHHHHHHHhcC
Q 027511          100 PGDMVLAIRKAISLL  114 (222)
Q Consensus       100 ~~~la~~i~~ll~~~  114 (222)
                      +++++++|.++++++
T Consensus       141 ~~~l~~~i~~ll~~~  155 (170)
T 2o6l_A          141 STDLLNALKRVINDP  155 (170)
T ss_dssp             HHHHHHHHHHHHHCH
T ss_pred             HHHHHHHHHHHHcCH
Confidence            899999999999874

>2p6p_A Glycosyl transferase; X-RAY-diffraction,urdamycina-biosynthesis; 1.88A {Streptomyces fradiae}

Probab=98.89  E-value=2.1e-09  Score=91.85  Aligned_cols=126  Identities=13%  Similarity=0.071  Sum_probs=84.9

Q ss_pred             ceEEEEEcCCccHHHHHHHHHHcCCCCcEEEeCCCChhHHHHHHHhccEEEEcCCCccccHHHHHHHHhCCcEEEeCCCC
Q 027511            4 KVRFIVGGDGPKRVRLEEMREKHSLQDRVEMLGAVPHAQVRSVLISGHIFLNSSLTEAFCIAILEAASCGLLTVSTRVGG   83 (222)
Q Consensus         4 ~~~lvi~G~g~~~~~l~~~~~~~~l~~~V~~~g~v~~~~~~~ll~~adv~v~~s~~E~~g~~ilEAma~G~PvVa~~~gg   83 (222)
                      +++++++++++..+.++    .  ++++|.+ |+++.   .++|..+|++|..+    .+++++|||++|+|+|+...++
T Consensus       244 ~~~~~~~~g~~~~~~l~----~--~~~~v~~-~~~~~---~~~l~~~d~~v~~~----G~~t~~Ea~~~G~P~v~~p~~~  309 (384)
T 2p6p_A          244 DVELIVAAPDTVAEALR----A--EVPQARV-GWTPL---DVVAPTCDLLVHHA----GGVSTLTGLSAGVPQLLIPKGS  309 (384)
T ss_dssp             TCEEEEECCHHHHHHHH----H--HCTTSEE-ECCCH---HHHGGGCSEEEECS----CTTHHHHHHHTTCCEEECCCSH
T ss_pred             CcEEEEEeCCCCHHhhC----C--CCCceEE-cCCCH---HHHHhhCCEEEeCC----cHHHHHHHHHhCCCEEEccCcc
Confidence            56777765543333332    1  3578999 99865   45789999999753    3568999999999999988753


Q ss_pred             ----ccccccCCceEEeCC----CHHHHHHHHHHHHhcCC-CCCHHHHHHHHHhcCCHHHHHHHHHHHH
Q 027511           84 ----VPEVLPDDMVVLAEP----DPGDMVLAIRKAISLLP-KIDPQVMHERMKKLYNWHDVAKRTEIVY  143 (222)
Q Consensus        84 ----~~e~i~~~~~g~~~~----~~~~la~~i~~ll~~~~-~~~~~~~~~~~~~~fs~~~~~~~~~~~~  143 (222)
                          ..+.+.+.+.|+..+    ++++++++|.+++++++ +....+..+.+...-..+..+..++++.
T Consensus       310 dq~~~a~~~~~~g~g~~~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~  378 (384)
T 2p6p_A          310 VLEAPARRVADYGAAIALLPGEDSTEAIADSCQELQAKDTYARRAQDLSREISGMPLPATVVTALEQLA  378 (384)
T ss_dssp             HHHHHHHHHHHHTSEEECCTTCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHH
T ss_pred             cchHHHHHHHHCCCeEecCcCCCCHHHHHHHHHHHHcCHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHh
Confidence                555555555554333    78999999999998865 3333444445555556666665555543

>3rsc_A CALG2; TDP, enediyne, structural genomics, PSI-2, protein structure initiative, center for eukaryotic structural genomics; HET: TYD C0T; 2.19A {Micromonospora echinospora} PDB: 3iaa_A*

Probab=98.88  E-value=2.6e-09  Score=92.12  Aligned_cols=110  Identities=16%  Similarity=0.098  Sum_probs=81.2

Q ss_pred             CCCcEEEeCCCChhHHHHHHHhccEEEEcCCCccccHHHHHHHHhCCcEEEeCC----CCccccccCCceEEeCC----C
Q 027511           28 LQDRVEMLGAVPHAQVRSVLISGHIFLNSSLTEAFCIAILEAASCGLLTVSTRV----GGVPEVLPDDMVVLAEP----D   99 (222)
Q Consensus        28 l~~~V~~~g~v~~~~~~~ll~~adv~v~~s~~E~~g~~ilEAma~G~PvVa~~~----gg~~e~i~~~~~g~~~~----~   99 (222)
                      ++++|.+.|++++.   .+|..||++|..+-    ..+++|||++|+|+|+...    ....+.+.+.+.+...+    +
T Consensus       295 ~~~~v~~~~~~~~~---~ll~~ad~~v~~~G----~~t~~Ea~~~G~P~v~~p~~~~q~~~a~~l~~~g~g~~~~~~~~~  367 (415)
T 3rsc_A          295 LPPNVEAHRWVPHV---KVLEQATVCVTHGG----MGTLMEALYWGRPLVVVPQSFDVQPMARRVDQLGLGAVLPGEKAD  367 (415)
T ss_dssp             CCTTEEEESCCCHH---HHHHHEEEEEESCC----HHHHHHHHHTTCCEEECCCSGGGHHHHHHHHHHTCEEECCGGGCC
T ss_pred             CCCcEEEEecCCHH---HHHhhCCEEEECCc----HHHHHHHHHhCCCEEEeCCcchHHHHHHHHHHcCCEEEcccCCCC
Confidence            45789999998754   88999999996543    4688999999999998543    33455555555554333    7


Q ss_pred             HHHHHHHHHHHHhcCC-CCCHHHHHHHHHhcCCHHHHHHHHHHHHH
Q 027511          100 PGDMVLAIRKAISLLP-KIDPQVMHERMKKLYNWHDVAKRTEIVYD  144 (222)
Q Consensus       100 ~~~la~~i~~ll~~~~-~~~~~~~~~~~~~~fs~~~~~~~~~~~~~  144 (222)
                      ++++++++.+++++++ +....+..+......+.+..++.+++++.
T Consensus       368 ~~~l~~~i~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~  413 (415)
T 3rsc_A          368 GDTLLAAVGAVAADPALLARVEAMRGHVRRAGGAARAADAVEAYLA  413 (415)
T ss_dssp             HHHHHHHHHHHHTCHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHcCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhh
Confidence            8999999999999866 33445555566677888888888777664

>2yjn_A ERYCIII, glycosyltransferase; transferase, cytochrome P450; 3.09A {Saccharopolyspora erythraea}

Probab=98.86  E-value=3.2e-09  Score=92.66  Aligned_cols=128  Identities=16%  Similarity=0.100  Sum_probs=90.1

Q ss_pred             ceEEEEEcCCccHHHHHHHHHHcCCCCcEEEeCCCChhHHHHHHHhccEEEEcCCCccccHHHHHHHHhCCcEEEeCCCC
Q 027511            4 KVRFIVGGDGPKRVRLEEMREKHSLQDRVEMLGAVPHAQVRSVLISGHIFLNSSLTEAFCIAILEAASCGLLTVSTRVGG   83 (222)
Q Consensus         4 ~~~lvi~G~g~~~~~l~~~~~~~~l~~~V~~~g~v~~~~~~~ll~~adv~v~~s~~E~~g~~ilEAma~G~PvVa~~~gg   83 (222)
                      +++++++++++..+.++      .++++|.+.|++++.   .+|.+||++|.    .+.++++.|||++|+|+|+....+
T Consensus       299 ~~~~v~~~g~~~~~~l~------~~~~~v~~~~~~~~~---~ll~~ad~~V~----~~G~~t~~Ea~~~G~P~i~~p~~~  365 (441)
T 2yjn_A          299 DAEIIATFDAQQLEGVA------NIPDNVRTVGFVPMH---ALLPTCAATVH----HGGPGSWHTAAIHGVPQVILPDGW  365 (441)
T ss_dssp             SSEEEECCCTTTTSSCS------SCCSSEEECCSCCHH---HHGGGCSEEEE----CCCHHHHHHHHHTTCCEEECCCSH
T ss_pred             CCEEEEEECCcchhhhc------cCCCCEEEecCCCHH---HHHhhCCEEEE----CCCHHHHHHHHHhCCCEEEeCCcc
Confidence            45666665544322111      356789999999864   56899999996    344679999999999999987743


Q ss_pred             ----ccccccCCceEEeCC----CHHHHHHHHHHHHhcCC-CCCHHHHHHHHHhcCCHHHHHHHHHHHHH
Q 027511           84 ----VPEVLPDDMVVLAEP----DPGDMVLAIRKAISLLP-KIDPQVMHERMKKLYNWHDVAKRTEIVYD  144 (222)
Q Consensus        84 ----~~e~i~~~~~g~~~~----~~~~la~~i~~ll~~~~-~~~~~~~~~~~~~~fs~~~~~~~~~~~~~  144 (222)
                          ..+.+.+.+.|+..+    ++++++++|.++++++. +....+..+......+.+.+++.+++++.
T Consensus       366 dQ~~na~~l~~~g~g~~~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~  435 (441)
T 2yjn_A          366 DTGVRAQRTQEFGAGIALPVPELTPDQLRESVKRVLDDPAHRAGAARMRDDMLAEPSPAEVVGICEELAA  435 (441)
T ss_dssp             HHHHHHHHHHHHTSEEECCTTTCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHH
T ss_pred             cHHHHHHHHHHcCCEEEcccccCCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHH
Confidence                445555555554333    78999999999999866 33444455556677888888887777653

>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}

Probab=98.85  E-value=2.8e-08  Score=84.92  Aligned_cols=104  Identities=6%  Similarity=0.051  Sum_probs=70.4

Q ss_pred             ceEEEEEcCCccHHHHHHHHHHcCCCCcEEEeCCCChhHHHHHHHhccEEEEcCCCccccHHHHHHHHhCCcEEEeCCCC
Q 027511            4 KVRFIVGGDGPKRVRLEEMREKHSLQDRVEMLGAVPHAQVRSVLISGHIFLNSSLTEAFCIAILEAASCGLLTVSTRVGG   83 (222)
Q Consensus         4 ~~~lvi~G~g~~~~~l~~~~~~~~l~~~V~~~g~v~~~~~~~ll~~adv~v~~s~~E~~g~~ilEAma~G~PvVa~~~gg   83 (222)
                      +++++..++....+.+.+..++.+.  ++.+.+++  +++.++|+.||++|.-+    -++++.|+|++|+|+|....+.
T Consensus       211 ~~~vi~~~G~~~~~~~~~~~~~~~~--~~~v~~f~--~dm~~~l~~aDlvI~ra----G~~Tv~E~~a~G~P~Ilip~p~  282 (365)
T 3s2u_A          211 RPAIRHQAGRQHAEITAERYRTVAV--EADVAPFI--SDMAAAYAWADLVICRA----GALTVSELTAAGLPAFLVPLPH  282 (365)
T ss_dssp             CCEEEEECCTTTHHHHHHHHHHTTC--CCEEESCC--SCHHHHHHHCSEEEECC----CHHHHHHHHHHTCCEEECC---
T ss_pred             ceEEEEecCccccccccceeccccc--ccccccch--hhhhhhhccceEEEecC----CcchHHHHHHhCCCeEEeccCC
Confidence            3444433322344555666665554  57788997  68999999999999543    4789999999999999766543


Q ss_pred             cc--------c-cccCCceEEeCC---CHHHHHHHHHHHHhcCC
Q 027511           84 VP--------E-VLPDDMVVLAEP---DPGDMVLAIRKAISLLP  115 (222)
Q Consensus        84 ~~--------e-~i~~~~~g~~~~---~~~~la~~i~~ll~~~~  115 (222)
                      ..        + +...+...++..   +++.|+++|.+++++++
T Consensus       283 ~~~~~Q~~NA~~l~~~G~a~~l~~~~~~~~~L~~~i~~ll~d~~  326 (365)
T 3s2u_A          283 AIDDHQTRNAEFLVRSGAGRLLPQKSTGAAELAAQLSEVLMHPE  326 (365)
T ss_dssp             --CCHHHHHHHHHHTTTSEEECCTTTCCHHHHHHHHHHHHHCTH
T ss_pred             CCCcHHHHHHHHHHHCCCEEEeecCCCCHHHHHHHHHHHHCCHH
Confidence            21        2 334444434432   68999999999999987

>4hwg_A UDP-N-acetylglucosamine 2-epimerase; ssgcid, structural genomics, seattle structural genomics center for infectious disease, isomerase; 2.00A {Rickettsia bellii}

Probab=98.84  E-value=1.4e-08  Score=87.64  Aligned_cols=103  Identities=16%  Similarity=0.193  Sum_probs=78.9

Q ss_pred             ceEEEEEcCCccHHHHHHHHHHc-C-C--CCcEEEeCCCChhHHHHHHHhccEEEEcCCCccccHHHHHHHHhCCcEEEe
Q 027511            4 KVRFIVGGDGPKRVRLEEMREKH-S-L--QDRVEMLGAVPHAQVRSVLISGHIFLNSSLTEAFCIAILEAASCGLLTVST   79 (222)
Q Consensus         4 ~~~lvi~G~g~~~~~l~~~~~~~-~-l--~~~V~~~g~v~~~~~~~ll~~adv~v~~s~~E~~g~~ilEAma~G~PvVa~   79 (222)
                      ++++++... +   .+++.++++ + +  .++|.+.+.++..++..+|+.||+++..|     |....||+++|+|+|..
T Consensus       237 ~~~vv~p~~-p---~~~~~l~~~~~~~~~~~~v~l~~~lg~~~~~~l~~~adlvvt~S-----Ggv~~EA~alG~Pvv~~  307 (385)
T 4hwg_A          237 NFLIIFSTH-P---RTKKRLEDLEGFKELGDKIRFLPAFSFTDYVKLQMNAFCILSDS-----GTITEEASILNLPALNI  307 (385)
T ss_dssp             CCEEEEEEC-H---HHHHHHHTSGGGGGTGGGEEECCCCCHHHHHHHHHHCSEEEECC-----TTHHHHHHHTTCCEEEC
T ss_pred             CeEEEEECC-h---HHHHHHHHHHHHhcCCCCEEEEcCCCHHHHHHHHHhCcEEEECC-----ccHHHHHHHcCCCEEEc
Confidence            455555443 2   355555554 3 2  36899999998889999999999999666     44679999999999987


Q ss_pred             CCC-CccccccCCceEEeCCCHHHHHHHHHHHHhcCC
Q 027511           80 RVG-GVPEVLPDDMVVLAEPDPGDMVLAIRKAISLLP  115 (222)
Q Consensus        80 ~~g-g~~e~i~~~~~g~~~~~~~~la~~i~~ll~~~~  115 (222)
                      +.. +.+|.+..+.+.++..|++++++++.++++++.
T Consensus       308 ~~~ter~e~v~~G~~~lv~~d~~~i~~ai~~ll~d~~  344 (385)
T 4hwg_A          308 REAHERPEGMDAGTLIMSGFKAERVLQAVKTITEEHD  344 (385)
T ss_dssp             SSSCSCTHHHHHTCCEECCSSHHHHHHHHHHHHTTCB
T ss_pred             CCCccchhhhhcCceEEcCCCHHHHHHHHHHHHhChH
Confidence            654 367888777665565699999999999999876

>2iya_A OLEI, oleandomycin glycosyltransferase; carbohydrate, glycosylation, enzyme, macrolide; HET: UDP ZIO; 1.7A {Streptomyces antibioticus}

Probab=98.66  E-value=5.8e-08  Score=84.01  Aligned_cols=109  Identities=16%  Similarity=0.057  Sum_probs=75.2

Q ss_pred             CCCcEEEeCCCChhHHHHHHHhccEEEEcCCCccccHHHHHHHHhCCcEEEeCCCC----ccccccCCceEEeCC----C
Q 027511           28 LQDRVEMLGAVPHAQVRSVLISGHIFLNSSLTEAFCIAILEAASCGLLTVSTRVGG----VPEVLPDDMVVLAEP----D   99 (222)
Q Consensus        28 l~~~V~~~g~v~~~~~~~ll~~adv~v~~s~~E~~g~~ilEAma~G~PvVa~~~gg----~~e~i~~~~~g~~~~----~   99 (222)
                      ++++|.+.+++++.   .+|..+|++|.-    +-.++++|||++|+|+|+....+    ..+.+.+.+.|+..+    +
T Consensus       303 ~~~~v~~~~~~~~~---~~l~~~d~~v~~----~G~~t~~Ea~~~G~P~i~~p~~~dQ~~na~~l~~~g~g~~~~~~~~~  375 (424)
T 2iya_A          303 VPPNVEVHQWVPQL---DILTKASAFITH----AGMGSTMEALSNAVPMVAVPQIAEQTMNAERIVELGLGRHIPRDQVT  375 (424)
T ss_dssp             CCTTEEEESSCCHH---HHHTTCSEEEEC----CCHHHHHHHHHTTCCEEECCCSHHHHHHHHHHHHTTSEEECCGGGCC
T ss_pred             CCCCeEEecCCCHH---HHHhhCCEEEEC----CchhHHHHHHHcCCCEEEecCccchHHHHHHHHHCCCEEEcCcCCCC
Confidence            46789999999765   689999999853    33579999999999999987643    334444445554433    7


Q ss_pred             HHHHHHHHHHHHhcCC-CCCHHHHHHHHHhcCCHHHHHHHHHHHH
Q 027511          100 PGDMVLAIRKAISLLP-KIDPQVMHERMKKLYNWHDVAKRTEIVY  143 (222)
Q Consensus       100 ~~~la~~i~~ll~~~~-~~~~~~~~~~~~~~fs~~~~~~~~~~~~  143 (222)
                      +++++++|.+++++++ +....+..+.+......+..++.+++++
T Consensus       376 ~~~l~~~i~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~  420 (424)
T 2iya_A          376 AEKLREAVLAVASDPGVAERLAAVRQEIREAGGARAAADILEGIL  420 (424)
T ss_dssp             HHHHHHHHHHHHHCHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHcCHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHH
Confidence            8999999999998865 2233333334444555566655555544

>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*

Probab=98.54  E-value=4.5e-07  Score=84.19  Aligned_cols=146  Identities=11%  Similarity=0.024  Sum_probs=110.0

Q ss_pred             CCceEEEEEcC-CccHHHHHHHHHHcCCC-CcEEEeCCCChhHHHHHHHhccEEEEcCCCccccHHHHHHHHhCCcEEEe
Q 027511            2 RVKVRFIVGGD-GPKRVRLEEMREKHSLQ-DRVEMLGAVPHAQVRSVLISGHIFLNSSLTEAFCIAILEAASCGLLTVST   79 (222)
Q Consensus         2 ~p~~~lvi~G~-g~~~~~l~~~~~~~~l~-~~V~~~g~v~~~~~~~ll~~adv~v~~s~~E~~g~~ilEAma~G~PvVa~   79 (222)
                      .|+.+|++... ......+++.+++.|+. +||.|.+..+.++....++.+|+++-|.-+- -+++..||+++|+|||+-
T Consensus       550 vP~S~L~Ll~~~~~~~~~l~~~~~~~gi~~~r~~f~~~~~~~~~l~~~~~~Di~LDt~p~~-g~tT~~eal~~GvPvvt~  628 (723)
T 4gyw_A          550 VPNSVLWLLRFPAVGEPNIQQYAQNMGLPQNRIIFSPVAPKEEHVRRGQLADVCLDTPLCN-GHTTGMDVLWAGTPMVTM  628 (723)
T ss_dssp             CSSEEEEEEETTGGGHHHHHHHHHHTTCCGGGEEEEECCCHHHHHHHGGGCSEEECCSSSC-CSHHHHHHHHTTCCEEBC
T ss_pred             CCCCeEEEEeCcHHHHHHHHHHHHhcCCCcCeEEECCCCCHHHHHHHhCCCeEEeCCCCcC-CHHHHHHHHHcCCCEEEc
Confidence            58899988764 34457788888888874 6899999999999999999999999886664 478999999999999986


Q ss_pred             CCCCccccccC------CceEEeCCCHHHHHHHHHHHHhcCC--CCCHHHHHHHHHh--cCCHHHHHHHHHHHHHHHhc
Q 027511           80 RVGGVPEVLPD------DMVVLAEPDPGDMVLAIRKAISLLP--KIDPQVMHERMKK--LYNWHDVAKRTEIVYDRALE  148 (222)
Q Consensus        80 ~~gg~~e~i~~------~~~g~~~~~~~~la~~i~~ll~~~~--~~~~~~~~~~~~~--~fs~~~~~~~~~~~~~~~~~  148 (222)
                      ....+..=+..      |..-++..|.++..+.-.++..+++  .....+.++....  -|+-..+++.+++.|+.+..
T Consensus       629 ~g~~~~sR~~~s~l~~~gl~e~ia~~~~~Y~~~a~~la~d~~~l~~lr~~l~~~~~~s~l~d~~~~~~~le~a~~~~w~  707 (723)
T 4gyw_A          629 PGETLASRVAASQLTCLGCLELIAKNRQEYEDIAVKLGTDLEYLKKVRGKVWKQRISSPLFNTKQYTMELERLYLQMWE  707 (723)
T ss_dssp             CCSSGGGTHHHHHHHHHTCGGGBCSSHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHSSTTCHHHHHHHHHHHHHHHHH
T ss_pred             cCCCccHhHHHHHHHHcCCcccccCCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHhCcCcCHHHHHHHHHHHHHHHHH
Confidence            64433322111      1122567789999999999998876  3333444444433  69999999999999998854

>4amg_A Snogd; transferase, polyketide biosynthesis, GT1 family, nogalamyci; HET: MLY; 2.59A {Streptomyces nogalater} PDB: 4an4_A* 4amb_A*

Probab=98.26  E-value=7.3e-07  Score=76.09  Aligned_cols=107  Identities=12%  Similarity=0.078  Sum_probs=73.2

Q ss_pred             CCCcEEEeCCCChhHHHHHHHhccEEEEcCCCccccHHHHHHHHhCCcEEEeCCCC----ccccccCCceEEeCCCHHHH
Q 027511           28 LQDRVEMLGAVPHAQVRSVLISGHIFLNSSLTEAFCIAILEAASCGLLTVSTRVGG----VPEVLPDDMVVLAEPDPGDM  103 (222)
Q Consensus        28 l~~~V~~~g~v~~~~~~~ll~~adv~v~~s~~E~~g~~ilEAma~G~PvVa~~~gg----~~e~i~~~~~g~~~~~~~~l  103 (222)
                      ++++|.+.+++|+.   .+|..+|+||.    .+..+++.|||++|+|+|+....+    +.+.+.+.+.|+..++.+..
T Consensus       286 ~~~~v~~~~~~p~~---~lL~~~~~~v~----h~G~~s~~Eal~~GvP~v~~P~~~dQ~~na~~v~~~G~g~~l~~~~~~  358 (400)
T 4amg_A          286 LPANVRVVEWIPLG---ALLETCDAIIH----HGGSGTLLTALAAGVPQCVIPHGSYQDTNRDVLTGLGIGFDAEAGSLG  358 (400)
T ss_dssp             CCTTEEEECCCCHH---HHHTTCSEEEE----CCCHHHHHHHHHHTCCEEECCC---CHHHHHHHHHHTSEEECCTTTCS
T ss_pred             CCCCEEEEeecCHH---HHhhhhhheec----cCCccHHHHHHHhCCCEEEecCcccHHHHHHHHHHCCCEEEcCCCCch
Confidence            46789999999754   57889999983    455678999999999999865543    33444455566666666667


Q ss_pred             HHHHHHHHhcCC-CCCHHHHHHHHHhcCCHHHHHHHHHH
Q 027511          104 VLAIRKAISLLP-KIDPQVMHERMKKLYNWHDVAKRTEI  141 (222)
Q Consensus       104 a~~i~~ll~~~~-~~~~~~~~~~~~~~fs~~~~~~~~~~  141 (222)
                      +++|.++++++. +....+.++.++..=+....++.+++
T Consensus       359 ~~al~~lL~d~~~r~~a~~l~~~~~~~~~~~~~a~~le~  397 (400)
T 4amg_A          359 AEQCRRLLDDAGLREAALRVRQEMSEMPPPAETAAXLVA  397 (400)
T ss_dssp             HHHHHHHHHCHHHHHHHHHHHHHHHTSCCHHHHHHHHHH
T ss_pred             HHHHHHHHcCHHHHHHHHHHHHHHHcCCCHHHHHHHHHH
Confidence            889999999866 33344444455555555555555544

>1iir_A Glycosyltransferase GTFB; rossmann fold; 1.80A {Amycolatopsis orientalis} SCOP: c.87.1.5

Probab=98.18  E-value=8.4e-07  Score=76.63  Aligned_cols=110  Identities=11%  Similarity=-0.028  Sum_probs=74.0

Q ss_pred             CCcEEEeCCCChhHHHHHHHhccEEEEcCCCccccHHHHHHHHhCCcEEEeCCCC----ccccccCCceEEeCC----CH
Q 027511           29 QDRVEMLGAVPHAQVRSVLISGHIFLNSSLTEAFCIAILEAASCGLLTVSTRVGG----VPEVLPDDMVVLAEP----DP  100 (222)
Q Consensus        29 ~~~V~~~g~v~~~~~~~ll~~adv~v~~s~~E~~g~~ilEAma~G~PvVa~~~gg----~~e~i~~~~~g~~~~----~~  100 (222)
                      +++|.+.+++++.+   +|.++|++|..    +-.+++.|||++|+|+|+....+    ..+.+.+.+.|+..+    ++
T Consensus       284 ~~~v~~~~~~~~~~---~l~~~d~~v~~----~G~~t~~Ea~~~G~P~i~~p~~~dQ~~na~~l~~~g~g~~~~~~~~~~  356 (415)
T 1iir_A          284 GADCFAIGEVNHQV---LFGRVAAVIHH----GGAGTTHVAARAGAPQILLPQMADQPYYAGRVAELGVGVAHDGPIPTF  356 (415)
T ss_dssp             GGGEEECSSCCHHH---HGGGSSEEEEC----CCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHHTSEEECSSSSCCH
T ss_pred             CCCEEEeCcCChHH---HHhhCCEEEeC----CChhHHHHHHHcCCCEEECCCCCccHHHHHHHHHCCCcccCCcCCCCH
Confidence            45799999998754   57999999963    33479999999999999987654    344454444454332    78


Q ss_pred             HHHHHHHHHHHhcCCCCCHHHHHHHHHhcCCHHHHHHHHHHHHHHHhcC
Q 027511          101 GDMVLAIRKAISLLPKIDPQVMHERMKKLYNWHDVAKRTEIVYDRALEC  149 (222)
Q Consensus       101 ~~la~~i~~ll~~~~~~~~~~~~~~~~~~fs~~~~~~~~~~~~~~~~~~  149 (222)
                      ++++++|.++ ++++  ...++. ...+.+....-.++..+.+++++..
T Consensus       357 ~~l~~~i~~l-~~~~--~~~~~~-~~~~~~~~~~~~~~~~~~i~~~~~~  401 (415)
T 1iir_A          357 DSLSAALATA-LTPE--THARAT-AVAGTIRTDGAAVAARLLLDAVSRE  401 (415)
T ss_dssp             HHHHHHHHHH-TSHH--HHHHHH-HHHHHSCSCHHHHHHHHHHHHHHTC
T ss_pred             HHHHHHHHHH-cCHH--HHHHHH-HHHHHHhhcChHHHHHHHHHHHHhc
Confidence            9999999999 7643  222232 2333344455666666666666553

>1l5w_A Maltodextrin phosphorylase; enzymatic catalysis, substrate complex, trans; HET: GLC PLP; 1.80A {Escherichia coli} SCOP: c.87.1.4 PDB: 1l5v_A* 1l6i_A* 2asv_A* 2av6_A* 2aw3_A* 2azd_A* 1qm5_A* 1e4o_A* 2ecp_A* 1ahp_A*

Probab=98.06  E-value=1.8e-05  Score=73.25  Aligned_cols=145  Identities=16%  Similarity=0.072  Sum_probs=99.3

Q ss_pred             CceEEEEEcCCccH----HHHHHHHHHc--------CCCC--cEEEeCCCChhHHHHHHHhccEEEEcCC--CccccHHH
Q 027511            3 VKVRFIVGGDGPKR----VRLEEMREKH--------SLQD--RVEMLGAVPHAQVRSVLISGHIFLNSSL--TEAFCIAI   66 (222)
Q Consensus         3 p~~~lvi~G~g~~~----~~l~~~~~~~--------~l~~--~V~~~g~v~~~~~~~ll~~adv~v~~s~--~E~~g~~i   66 (222)
                      ..++|+++|.+...    +.+.+++...        ..++  +|.|+...+-+--..++.+||++++||+  +|++|+.=
T Consensus       564 ~p~q~If~GKA~P~y~~aK~iIk~i~~va~~in~Dp~~~~~lKVvfl~nY~vslA~~I~~gaDv~l~~S~a~~EAsGTs~  643 (796)
T 1l5w_A          564 VPRVFLFGAKAAPGYYLAKNIIFAINKVADVINNDPLVGDKLKVVFLPDYCVSAAEKLIPAADISEQISTAGKEASGTGN  643 (796)
T ss_dssp             CCEEEEEECCCCTTCHHHHHHHHHHHHHHHHHHTCTTTGGGEEEEECSSCCHHHHHHHGGGCSEEEECCCTTTCCCCSHH
T ss_pred             CCeEEEEEecCChhHHHHHHHHHHHHHHHHHhccccccCCceEEEEECCCCHHHHHHHhhhcceeecCCCCCCCCCchHH
Confidence            35899999976532    2222222222        3556  8999988888888889999999999999  99999999


Q ss_pred             HHHHHhCCcEEEeCCCCccccccC--CceEEeCC-CHHHHHHHHHH---HHhcCC-CCCHHHHH-HHHHhcCCHHHHHHH
Q 027511           67 LEAASCGLLTVSTRVGGVPEVLPD--DMVVLAEP-DPGDMVLAIRK---AISLLP-KIDPQVMH-ERMKKLYNWHDVAKR  138 (222)
Q Consensus        67 lEAma~G~PvVa~~~gg~~e~i~~--~~~g~~~~-~~~~la~~i~~---ll~~~~-~~~~~~~~-~~~~~~fs~~~~~~~  138 (222)
                      +=+|..|++.|++--|...|+..+  ..++|... +++++.+.-..   ..+-.. .....+.. ......|||..- ..
T Consensus       644 MKam~NGaL~iGtLDGanvEi~e~vG~~NgF~FG~~~~ev~~l~~~~y~a~~~y~~~~~~~~vvd~~~~g~fs~~~~-~~  722 (796)
T 1l5w_A          644 MKLALNGALTVGTLDGANVEIAEKVGEENIFIFGHTVEQVKAILAKGYDPVKWRKKDKVLDAVLKELESGKYSDGDK-HA  722 (796)
T ss_dssp             HHHHHTTCEEEECSCTTHHHHHHHHCGGGSEECSCCHHHHHHHHHHCCCHHHHHHHCHHHHHHHHHHHHTTTTTTCT-TT
T ss_pred             HHHHHcCCeeecCcCCeeeehhhccCCCcEEEecCCHHHHHHHHHcccCHHHHhhcCHHHHHHHHHHHcCCCCCCcH-HH
Confidence            999999999999999999888754  35667666 55555532111   111000 11122222 233467999875 77


Q ss_pred             HHHHHHHHhc
Q 027511          139 TEIVYDRALE  148 (222)
Q Consensus       139 ~~~~~~~~~~  148 (222)
                      +..+|++++.
T Consensus       723 y~~Ly~~L~~  732 (796)
T 1l5w_A          723 FDQMLHSIGK  732 (796)
T ss_dssp             THHHHHHTST
T ss_pred             HHHHHHHHhc
Confidence            9999998875

>2c4m_A Glycogen phosphorylase; allosteric control, phosphate dependence, starch degrading, transferase, glycosyltransferase; HET: PLP; 1.9A {Corynebacterium callunae}

Probab=97.97  E-value=1e-05  Score=74.94  Aligned_cols=144  Identities=11%  Similarity=0.050  Sum_probs=98.4

Q ss_pred             CceEEEEEcCCccH----HH----HHHHHH----HcCCCC--cEEEeCCCChhHHHHHHHhccEEEEcCC--CccccHHH
Q 027511            3 VKVRFIVGGDGPKR----VR----LEEMRE----KHSLQD--RVEMLGAVPHAQVRSVLISGHIFLNSSL--TEAFCIAI   66 (222)
Q Consensus         3 p~~~lvi~G~g~~~----~~----l~~~~~----~~~l~~--~V~~~g~v~~~~~~~ll~~adv~v~~s~--~E~~g~~i   66 (222)
                      ..++|+++|.+...    +.    +.++++    .-..++  +|.|+...+-+--..++.+||++++||+  +|++|+.=
T Consensus       554 ~p~q~If~GKA~P~y~~aK~iIk~i~~va~~in~dp~~~~~lKVvFl~nY~vslA~~I~~gaDv~l~~S~a~~EAsGTs~  633 (796)
T 2c4m_A          554 PARTVIFGAKAAPGYVRAKAIIKLINSIADLVNNDPEVSPLLKVVFVENYNVSPAEHILPASDVSEQISTAGKEASGTSN  633 (796)
T ss_dssp             CCEEEEEECCCCTTCHHHHHHHHHHHHHHHHHHTCTTTTTTEEEEEETTCCHHHHHHHGGGCSEEEECCCTTSCSCCHHH
T ss_pred             CCeEEEEEecCCHhHHHHHHHHHHHHHHHHHhccccccCCceEEEEECCCCHHHHHHHhhhcceeecCCCCCCCCCchHH
Confidence            36899999976532    22    222332    114566  8999998888888899999999999999  99999999


Q ss_pred             HHHHHhCCcEEEeCCCCccccccC--CceEEeCC----CHHHHHHHHHHHHhcCC-CCCHHHHHHHH-HhcCCHHHHHHH
Q 027511           67 LEAASCGLLTVSTRVGGVPEVLPD--DMVVLAEP----DPGDMVLAIRKAISLLP-KIDPQVMHERM-KKLYNWHDVAKR  138 (222)
Q Consensus        67 lEAma~G~PvVa~~~gg~~e~i~~--~~~g~~~~----~~~~la~~i~~ll~~~~-~~~~~~~~~~~-~~~fs~~~~~~~  138 (222)
                      +=+|..|++.|++--|...|+...  ..++|...    +++++... .+..+-.. .....+....+ ...|||..- ..
T Consensus       634 MKam~NGaL~iGtLDGanvEi~e~vG~~NgF~FG~~~~ev~~l~~~-y~a~~~y~~~~~~~~vvd~~~~g~fs~~~~-~~  711 (796)
T 2c4m_A          634 MKFMMNGALTLGTMDGANVEIVDSVGEENAYIFGARVEELPALRES-YKPYELYETVPGLKRALDALDNGTLNDNNS-GL  711 (796)
T ss_dssp             HHHHHTTCEEEEESSTHHHHHHHHHCGGGSEEESCCTTTHHHHHHT-CCHHHHHHHSTTHHHHHHTTTSSSSCCTTC-CH
T ss_pred             HHHHHcCCeEEeccCCeEeehhhhcCCCcEEEecCchhhHHHHHHh-hChHHHhhcCHHHHHHHHHHHcCCCCCCCH-HH
Confidence            999999999999998988888654  24555443    44555443 22211111 11222222222 357888776 77


Q ss_pred             HHHHHHHHhc
Q 027511          139 TEIVYDRALE  148 (222)
Q Consensus       139 ~~~~~~~~~~  148 (222)
                      +..+|++++.
T Consensus       712 y~~Ly~~L~~  721 (796)
T 2c4m_A          712 FYDLKHSLIH  721 (796)
T ss_dssp             HHHHHHHHHS
T ss_pred             HHHHHHHHHh
Confidence            9999999875

>1rrv_A Glycosyltransferase GTFD; GT-B, glycosyltransferase, rossmann fold, glycopeptide, VACO antibiotic, transferase-antibiotic complex; HET: OMZ GHP OMY 3FG TYD BGC; 2.00A {Amycolatopsis orientalis} SCOP: c.87.1.5

Probab=97.91  E-value=3.6e-06  Score=72.63  Aligned_cols=79  Identities=9%  Similarity=0.002  Sum_probs=58.0

Q ss_pred             CCCcEEEeCCCChhHHHHHHHhccEEEEcCCCccccHHHHHHHHhCCcEEEeCCCC----ccccccCCceEEeC----CC
Q 027511           28 LQDRVEMLGAVPHAQVRSVLISGHIFLNSSLTEAFCIAILEAASCGLLTVSTRVGG----VPEVLPDDMVVLAE----PD   99 (222)
Q Consensus        28 l~~~V~~~g~v~~~~~~~ll~~adv~v~~s~~E~~g~~ilEAma~G~PvVa~~~gg----~~e~i~~~~~g~~~----~~   99 (222)
                      ++++|.+.+++++   .++|.++|++|.    .+-.+++.||+++|+|+|+....+    ..+.+.+.+.|+..    .+
T Consensus       284 ~~~~v~~~~~~~~---~~ll~~~d~~v~----~~G~~t~~Ea~~~G~P~i~~p~~~dQ~~na~~l~~~g~g~~~~~~~~~  356 (416)
T 1rrv_A          284 DRDDCFAIDEVNF---QALFRRVAAVIH----HGSAGTEHVATRAGVPQLVIPRNTDQPYFAGRVAALGIGVAHDGPTPT  356 (416)
T ss_dssp             CCTTEEEESSCCH---HHHGGGSSEEEE----CCCHHHHHHHHHHTCCEEECCCSBTHHHHHHHHHHHTSEEECSSSCCC
T ss_pred             CCCCEEEeccCCh---HHHhccCCEEEe----cCChhHHHHHHHcCCCEEEccCCCCcHHHHHHHHHCCCccCCCCCCCC
Confidence            4568999999975   456799999996    334579999999999999876643    33344444444332    27


Q ss_pred             HHHHHHHHHHHHhcC
Q 027511          100 PGDMVLAIRKAISLL  114 (222)
Q Consensus       100 ~~~la~~i~~ll~~~  114 (222)
                      +++++++|.++ +++
T Consensus       357 ~~~l~~~i~~l-~~~  370 (416)
T 1rrv_A          357 FESLSAALTTV-LAP  370 (416)
T ss_dssp             HHHHHHHHHHH-TSH
T ss_pred             HHHHHHHHHHh-hCH
Confidence            89999999999 764

>2gj4_A Glycogen phosphorylase, muscle form; transferase; HET: PLR 2TH; 1.60A {Oryctolagus cuniculus} SCOP: c.87.1.4 PDB: 2gm9_A* 1abb_A* 3nc4_A* 3l79_A* 2pyd_A* 2pyi_A* 3l7a_A* 3l7b_A* 3l7c_A* 3l7d_A* 2qnb_A* 1c8l_A* 1axr_A* 1gpy_A* 1e1y_A* 1lwo_A* 1pyg_A* 1uzu_A* 1lwn_A* 1xkx_A* ...

Probab=97.91  E-value=8.8e-06  Score=75.57  Aligned_cols=142  Identities=14%  Similarity=0.115  Sum_probs=97.8

Q ss_pred             ceEEEEEcCCccH----HH----HHHHHHHc----CCCC--cEEEeCCCChhHHHHHHHhccEEEEcCC--CccccHHHH
Q 027511            4 KVRFIVGGDGPKR----VR----LEEMREKH----SLQD--RVEMLGAVPHAQVRSVLISGHIFLNSSL--TEAFCIAIL   67 (222)
Q Consensus         4 ~~~lvi~G~g~~~----~~----l~~~~~~~----~l~~--~V~~~g~v~~~~~~~ll~~adv~v~~s~--~E~~g~~il   67 (222)
                      +++|+++|.+...    +.    +.++++.+    ..++  +|.|+...+-+--..++.+||++++||+  .|++|+.=+
T Consensus       589 p~q~If~GKA~P~y~~aK~iIkli~~va~~in~Dp~v~~~lKVvFl~nYdvslA~~I~~gaDv~l~~S~ag~EAsGTs~M  668 (824)
T 2gj4_A          589 PRTVMIGGKAAPGYHMAKMIIKLITAIGDVVNHDPVVGDRLRVIFLENYRVSLAEKVIPAADLSEQISTAGTEASGTGNM  668 (824)
T ss_dssp             CEEEEEECCCCTTCHHHHHHHHHHHHHHHHHTTCTTTGGGEEEEEETTCCHHHHHHHGGGCSEEEECCCTTSCSCCSHHH
T ss_pred             CEEEEEEEeCCHhHHHHHHHHHHHHHHHHHhccCcccCCceEEEEECCCCHHHHHHHhhhcceeecCCCCCCCCCchHHH
Confidence            6799999976532    12    33444433    2245  7999998888888889999999999999  999999999


Q ss_pred             HHHHhCCcEEEeCCCCcccccc--CCceEEeCC-CHHHHHHHHH-------HHHhcCCCCCHHHHHHHHHhcCCHHHHHH
Q 027511           68 EAASCGLLTVSTRVGGVPEVLP--DDMVVLAEP-DPGDMVLAIR-------KAISLLPKIDPQVMHERMKKLYNWHDVAK  137 (222)
Q Consensus        68 EAma~G~PvVa~~~gg~~e~i~--~~~~g~~~~-~~~~la~~i~-------~ll~~~~~~~~~~~~~~~~~~fs~~~~~~  137 (222)
                      =||..|.+.|++--|...|+..  ...+||..+ .++++ ..+.       .+.+... ....-...-+...|+|..- .
T Consensus       669 KamlNGaLtigtlDGanvEi~e~vG~~Ngf~FG~~~~ev-~~l~~~~~~a~~~Y~~~~-~l~~v~d~i~~g~fs~~~~-~  745 (824)
T 2gj4_A          669 KFMLNGALTIGTMDGANVEMAEEAGEENFFIFGMRVEDV-DRLDQRGYNAQEYYDRIP-ELRQIIEQLSSGFFSPKQP-D  745 (824)
T ss_dssp             HHHHTTCEEEECSCTTHHHHHHHHCGGGSEECSCCHHHH-HHHHHHCCCHHHHHHHCH-HHHHHHHHHHHTTTCTTST-T
T ss_pred             HHHHcCceEEEEecCccchhhhccCCCCEEEeCCcHHHH-HHHHHcCCCHHHHhcCCH-HHHHHHHHHHhCCCCCCCh-H
Confidence            9999999999998898888764  345567766 45555 4331       1111111 0111111233467998776 7


Q ss_pred             HHHHHHHHHhc
Q 027511          138 RTEIVYDRALE  148 (222)
Q Consensus       138 ~~~~~~~~~~~  148 (222)
                      ++..+|++++.
T Consensus       746 ~y~~ly~~l~~  756 (824)
T 2gj4_A          746 LFKDIVNMLMH  756 (824)
T ss_dssp             TTHHHHHHHHH
T ss_pred             HHHHHHHHHHc
Confidence            78888888864

>3h4t_A Glycosyltransferase GTFA, glycosyltransferase; vancomycin, teicoplanin, ORF1, natural products, antibiotic; HET: UDP; 1.15A {Amycolatopsis orientalis} SCOP: c.87.1.5 PDB: 3h4i_A* 1pn3_A* 1pnv_A*

Probab=97.86  E-value=1.1e-05  Score=69.40  Aligned_cols=110  Identities=13%  Similarity=0.028  Sum_probs=69.0

Q ss_pred             CCCcEEEeCCCChhHHHHHHHhccEEEEcCCCccccHHHHHHHHhCCcEEEeCCCCc----cccccCCceEEe-C---CC
Q 027511           28 LQDRVEMLGAVPHAQVRSVLISGHIFLNSSLTEAFCIAILEAASCGLLTVSTRVGGV----PEVLPDDMVVLA-E---PD   99 (222)
Q Consensus        28 l~~~V~~~g~v~~~~~~~ll~~adv~v~~s~~E~~g~~ilEAma~G~PvVa~~~gg~----~e~i~~~~~g~~-~---~~   99 (222)
                      .+++|.+.+++++   ..++..+|++|.-+    -..++.||+++|+|+|....++-    .+.+...+.+.. .   .+
T Consensus       266 ~~~~v~~~~~~~~---~~ll~~~d~~v~~g----G~~t~~Eal~~GvP~v~~p~~~dQ~~na~~~~~~G~g~~l~~~~~~  338 (404)
T 3h4t_A          266 EGDDCLVVGEVNH---QVLFGRVAAVVHHG----GAGTTTAVTRAGAPQVVVPQKADQPYYAGRVADLGVGVAHDGPTPT  338 (404)
T ss_dssp             CCTTEEEESSCCH---HHHGGGSSEEEECC----CHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHHTSEEECSSSSCC
T ss_pred             CCCCEEEecCCCH---HHHHhhCcEEEECC----cHHHHHHHHHcCCCEEEcCCcccHHHHHHHHHHCCCEeccCcCCCC
Confidence            3568999999875   45778999999433    34788999999999998765432    122333333332 2   27


Q ss_pred             HHHHHHHHHHHHhcCCCCCHHHHHHHHHhcCCHHHHHHHHHHHHHHHhcC
Q 027511          100 PGDMVLAIRKAISLLPKIDPQVMHERMKKLYNWHDVAKRTEIVYDRALEC  149 (222)
Q Consensus       100 ~~~la~~i~~ll~~~~~~~~~~~~~~~~~~fs~~~~~~~~~~~~~~~~~~  149 (222)
                      ++++.+++.++++ ++  ...+ ...+.+.+.- .-.++..+.+++.+..
T Consensus       339 ~~~l~~ai~~ll~-~~--~~~~-~~~~~~~~~~-~~~~~~~~~i~~~~~~  383 (404)
T 3h4t_A          339 VESLSAALATALT-PG--IRAR-AAAVAGTIRT-DGTTVAAKLLLEAISR  383 (404)
T ss_dssp             HHHHHHHHHHHTS-HH--HHHH-HHHHHTTCCC-CHHHHHHHHHHHHHHC
T ss_pred             HHHHHHHHHHHhC-HH--HHHH-HHHHHHHHhh-hHHHHHHHHHHHHHhh
Confidence            8999999999997 43  2222 2233333332 3444444555555443

>3hbm_A UDP-sugar hydrolase; PSEG; 1.80A {Campylobacter jejuni subsp} PDB: 3hbn_A*

Probab=96.96  E-value=0.0027  Score=52.12  Aligned_cols=63  Identities=11%  Similarity=0.122  Sum_probs=48.2

Q ss_pred             EEEcCC-ccHHHHHHHHHHcCCCCcEEEeCCCChhHHHHHHHhccEEEEcCCCccccHHHHHHHHhCCcEEEeC
Q 027511            8 IVGGDG-PKRVRLEEMREKHSLQDRVEMLGAVPHAQVRSVLISGHIFLNSSLTEAFCIAILEAASCGLLTVSTR   80 (222)
Q Consensus         8 vi~G~g-~~~~~l~~~~~~~~l~~~V~~~g~v~~~~~~~ll~~adv~v~~s~~E~~g~~ilEAma~G~PvVa~~   80 (222)
                      ++.|.+ +..+++++.+++.   .++.+.+++  +++..+|+.||+.|.+     .|.++.|++++|+|.|.-.
T Consensus       188 vv~G~~~~~~~~l~~~~~~~---~~v~v~~~~--~~m~~~m~~aDlvI~~-----gG~T~~E~~~~g~P~i~ip  251 (282)
T 3hbm_A          188 IATSSSNPNLKKLQKFAKLH---NNIRLFIDH--ENIAKLMNESNKLIIS-----ASSLVNEALLLKANFKAIC  251 (282)
T ss_dssp             EEECTTCTTHHHHHHHHHTC---SSEEEEESC--SCHHHHHHTEEEEEEE-----SSHHHHHHHHTTCCEEEEC
T ss_pred             EEECCCchHHHHHHHHHhhC---CCEEEEeCH--HHHHHHHHHCCEEEEC-----CcHHHHHHHHcCCCEEEEe
Confidence            445644 3456666666543   379999986  7899999999999973     3579999999999999764

>2c1x_A UDP-glucose flavonoid 3-O glycosyltransferase; WINE, catalysis, glycosylation; HET: UDP B3P; 1.9A {Vitis vinifera} SCOP: c.87.1.10 PDB: 2c1z_A* 2c9z_A*

Probab=96.40  E-value=0.0095  Score=52.08  Aligned_cols=78  Identities=14%  Similarity=0.111  Sum_probs=55.1

Q ss_pred             CcEEEeCCCChhHHHHHHH--hccEEEEcCCCccccHHHHHHHHhCCcEEEeCCCC----ccccccCC-ceEEeCC----
Q 027511           30 DRVEMLGAVPHAQVRSVLI--SGHIFLNSSLTEAFCIAILEAASCGLLTVSTRVGG----VPEVLPDD-MVVLAEP----   98 (222)
Q Consensus        30 ~~V~~~g~v~~~~~~~ll~--~adv~v~~s~~E~~g~~ilEAma~G~PvVa~~~gg----~~e~i~~~-~~g~~~~----   98 (222)
                      +++...+++|+.   .+|.  ++|+||    +-+-.+++.||+++|+|+|+....+    ....+.+. +.|+..+    
T Consensus       325 ~~~~v~~w~pq~---~vL~h~~~~~fv----th~G~~S~~Eal~~GvP~i~~P~~~dQ~~Na~~l~~~~g~g~~l~~~~~  397 (456)
T 2c1x_A          325 GYGMVVPWAPQA---EVLAHEAVGAFV----THCGWNSLWESVAGGVPLICRPFFGDQRLNGRMVEDVLEIGVRIEGGVF  397 (456)
T ss_dssp             TTEEEESCCCHH---HHHTSTTEEEEE----ECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHTSCCEEECGGGSC
T ss_pred             CceEEecCCCHH---HHhcCCcCCEEE----ecCCcchHHHHHHhCceEEecCChhhHHHHHHHHHHHhCeEEEecCCCc
Confidence            467888888763   5687  677887    4555789999999999999876532    22233333 4443322    


Q ss_pred             CHHHHHHHHHHHHhcC
Q 027511           99 DPGDMVLAIRKAISLL  114 (222)
Q Consensus        99 ~~~~la~~i~~ll~~~  114 (222)
                      +.+++.++|.++++++
T Consensus       398 ~~~~l~~~i~~ll~~~  413 (456)
T 2c1x_A          398 TKSGLMSCFDQILSQE  413 (456)
T ss_dssp             CHHHHHHHHHHHHHSH
T ss_pred             CHHHHHHHHHHHHCCC
Confidence            6899999999999874

>2pq6_A UDP-glucuronosyl/UDP-glucosyltransferase; glycosylation, isoflavonoid, uridine diphosphate glycosyltransferase; 2.10A {Medicago truncatula} SCOP: c.87.1.10

Probab=96.25  E-value=0.013  Score=51.47  Aligned_cols=78  Identities=17%  Similarity=0.072  Sum_probs=54.5

Q ss_pred             CcEEEeCCCChhHHHHHHHhccE--EEEcCCCccccHHHHHHHHhCCcEEEeCCCC----cccccc-CCceEEeCC---C
Q 027511           30 DRVEMLGAVPHAQVRSVLISGHI--FLNSSLTEAFCIAILEAASCGLLTVSTRVGG----VPEVLP-DDMVVLAEP---D   99 (222)
Q Consensus        30 ~~V~~~g~v~~~~~~~ll~~adv--~v~~s~~E~~g~~ilEAma~G~PvVa~~~gg----~~e~i~-~~~~g~~~~---~   99 (222)
                      +++.+.+++|+.   .+|..+++  ||    +-+-.+++.||+++|+|+|+....+    ....+. ..+.|+...   +
T Consensus       353 ~~~~v~~~~pq~---~~L~h~~~~~~v----th~G~~s~~Eal~~GvP~i~~P~~~dQ~~na~~~~~~~G~g~~l~~~~~  425 (482)
T 2pq6_A          353 DRGLIASWCPQD---KVLNHPSIGGFL----THCGWNSTTESICAGVPMLCWPFFADQPTDCRFICNEWEIGMEIDTNVK  425 (482)
T ss_dssp             TTEEEESCCCHH---HHHTSTTEEEEE----ECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHTSCCEEECCSSCC
T ss_pred             CCEEEEeecCHH---HHhcCCCCCEEE----ecCCcchHHHHHHcCCCEEecCcccchHHHHHHHHHHhCEEEEECCCCC
Confidence            578888888765   47866555  66    4455689999999999999876542    222232 334444332   7


Q ss_pred             HHHHHHHHHHHHhcC
Q 027511          100 PGDMVLAIRKAISLL  114 (222)
Q Consensus       100 ~~~la~~i~~ll~~~  114 (222)
                      .+++.++|.++++++
T Consensus       426 ~~~l~~~i~~ll~~~  440 (482)
T 2pq6_A          426 REELAKLINEVIAGD  440 (482)
T ss_dssp             HHHHHHHHHHHHTSH
T ss_pred             HHHHHHHHHHHHcCC
Confidence            899999999999864

>1psw_A ADP-heptose LPS heptosyltransferase II; structural genomics, NYSGXRC, LPS biosynthetic pathway, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: c.87.1.7

Probab=96.21  E-value=0.012  Score=48.95  Aligned_cols=72  Identities=10%  Similarity=0.001  Sum_probs=51.1

Q ss_pred             ceEEEEEcCCccHHHHHHHHHHcCC---CCcEEEeCCCChhHHHHHHHhccEEEEcCCCccccHHHHHHHHhCCcEEEeC
Q 027511            4 KVRFIVGGDGPKRVRLEEMREKHSL---QDRVEMLGAVPHAQVRSVLISGHIFLNSSLTEAFCIAILEAASCGLLTVSTR   80 (222)
Q Consensus         4 ~~~lvi~G~g~~~~~l~~~~~~~~l---~~~V~~~g~v~~~~~~~ll~~adv~v~~s~~E~~g~~ilEAma~G~PvVa~~   80 (222)
                      ++++++.|...+.+..+++.+..+-   ...+.+.|..+-.++..+++.||++|....    | .+..|+++|+|+|+--
T Consensus       213 ~~~vvl~g~~~e~~~~~~i~~~~~~~~~~~~~~l~g~~sl~e~~ali~~a~l~I~~Ds----g-~~HlAaa~g~P~v~lf  287 (348)
T 1psw_A          213 GYQVVLFGSAKDHEAGNEILAALNTEQQAWCRNLAGETQLDQAVILIAACKAIVTNDS----G-LMHVAAALNRPLVALY  287 (348)
T ss_dssp             TCEEEECCCGGGHHHHHHHHTTSCHHHHTTEEECTTTSCHHHHHHHHHTSSEEEEESS----H-HHHHHHHTTCCEEEEE
T ss_pred             CCeEEEEeChhhHHHHHHHHHhhhhccccceEeccCcCCHHHHHHHHHhCCEEEecCC----H-HHHHHHHcCCCEEEEE
Confidence            5788888876666555555543321   123467888889999999999999997642    3 3444999999999743

>3hbf_A Flavonoid 3-O-glucosyltransferase; glycosyltransferase, GT-B fold, GT1, phenylpropanoid metabolism; HET: UDP MYC; 2.10A {Medicago truncatula} SCOP: c.87.1.0 PDB: 3hbj_A*

Probab=96.11  E-value=0.019  Score=50.30  Aligned_cols=79  Identities=13%  Similarity=0.071  Sum_probs=54.4

Q ss_pred             CcEEEeCCCChhHHHHHHHhccEEEEcCCCccccHHHHHHHHhCCcEEEeCCCC----ccccccCC-ceEEeC----CCH
Q 027511           30 DRVEMLGAVPHAQVRSVLISGHIFLNSSLTEAFCIAILEAASCGLLTVSTRVGG----VPEVLPDD-MVVLAE----PDP  100 (222)
Q Consensus        30 ~~V~~~g~v~~~~~~~ll~~adv~v~~s~~E~~g~~ilEAma~G~PvVa~~~gg----~~e~i~~~-~~g~~~----~~~  100 (222)
                      +|+...+|+|+   ..+|..+++.++-  +-+-.++++||+++|+|.|+....+    ....+.+. +.|+..    -+.
T Consensus       327 ~~~~vv~w~Pq---~~vL~h~~v~~fv--tH~G~~S~~Eal~~GvP~i~~P~~~DQ~~Na~~v~~~~g~Gv~l~~~~~~~  401 (454)
T 3hbf_A          327 TKGKIVAWAPQ---VEILKHSSVGVFL--THSGWNSVLECIVGGVPMISRPFFGDQGLNTILTESVLEIGVGVDNGVLTK  401 (454)
T ss_dssp             TTEEEESSCCH---HHHHHSTTEEEEE--ECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHTTSCSEEECGGGSCCH
T ss_pred             CceEEEeeCCH---HHHHhhcCcCeEE--ecCCcchHHHHHHcCCCEecCcccccHHHHHHHHHHhhCeeEEecCCCCCH
Confidence            47888899886   3778888843332  3334578999999999999876532    22234442 444332    267


Q ss_pred             HHHHHHHHHHHhc
Q 027511          101 GDMVLAIRKAISL  113 (222)
Q Consensus       101 ~~la~~i~~ll~~  113 (222)
                      +++.++|.+++++
T Consensus       402 ~~l~~av~~ll~~  414 (454)
T 3hbf_A          402 ESIKKALELTMSS  414 (454)
T ss_dssp             HHHHHHHHHHHSS
T ss_pred             HHHHHHHHHHHCC
Confidence            9999999999975

>3tov_A Glycosyl transferase family 9; structural genomics, PSI-BIOL protein structure initiative, midwest center for structural genomics, MCSG; 2.98A {Veillonella parvula}

Probab=95.63  E-value=0.041  Score=46.22  Aligned_cols=77  Identities=9%  Similarity=0.040  Sum_probs=55.7

Q ss_pred             ceEEEEEcCCccHHHHHHHHHHcCCCCcEEEeCCCChhHHHHHHHhccEEEEcCCCccccHHHHHHHHhCCcEEEeCCCC
Q 027511            4 KVRFIVGGDGPKRVRLEEMREKHSLQDRVEMLGAVPHAQVRSVLISGHIFLNSSLTEAFCIAILEAASCGLLTVSTRVGG   83 (222)
Q Consensus         4 ~~~lvi~G~g~~~~~l~~~~~~~~l~~~V~~~g~v~~~~~~~ll~~adv~v~~s~~E~~g~~ilEAma~G~PvVa~~~gg   83 (222)
                      +.++++.|...+++..++..+..+. ..+.+.|..+-.++..+++.||++|..-.    |..-+ |.++|+|+|+--...
T Consensus       217 g~~vvl~g~~~e~~~~~~i~~~~~~-~~~~l~g~~sl~e~~ali~~a~~~i~~Ds----G~~Hl-Aaa~g~P~v~lfg~t  290 (349)
T 3tov_A          217 GYKTVFFGGPMDLEMVQPVVEQMET-KPIVATGKFQLGPLAAAMNRCNLLITNDS----GPMHV-GISQGVPIVALYGPS  290 (349)
T ss_dssp             TCEEEECCCTTTHHHHHHHHHTCSS-CCEECTTCCCHHHHHHHHHTCSEEEEESS----HHHHH-HHTTTCCEEEECSSC
T ss_pred             CCeEEEEeCcchHHHHHHHHHhccc-ccEEeeCCCCHHHHHHHHHhCCEEEECCC----CHHHH-HHhcCCCEEEEECCC
Confidence            4677888877677777777666542 34667888899999999999999996532    44444 899999999864433


Q ss_pred             ccc
Q 027511           84 VPE   86 (222)
Q Consensus        84 ~~e   86 (222)
                      .+.
T Consensus       291 ~p~  293 (349)
T 3tov_A          291 NPF  293 (349)
T ss_dssp             CHH
T ss_pred             Ccc
Confidence            333

>2gt1_A Lipopolysaccharide heptosyltransferase-1; GT-B fold; 1.90A {Escherichia coli UTI89} PDB: 2h1f_A* 2h1h_A*

Probab=95.16  E-value=0.086  Score=43.39  Aligned_cols=102  Identities=15%  Similarity=0.167  Sum_probs=62.2

Q ss_pred             ceEEEEEcCCc-cHHHHHHHHHHcCCCCcEEEeCCCChhHHHHHHHhccEEEEcCCCccccHHHHHHHHhCCcEEEeCCC
Q 027511            4 KVRFIVGGDGP-KRVRLEEMREKHSLQDRVEMLGAVPHAQVRSVLISGHIFLNSSLTEAFCIAILEAASCGLLTVSTRVG   82 (222)
Q Consensus         4 ~~~lvi~G~g~-~~~~l~~~~~~~~l~~~V~~~g~v~~~~~~~ll~~adv~v~~s~~E~~g~~ilEAma~G~PvVa~~~g   82 (222)
                      ++++++.++++ +++..++..+..  + ++.+.|..+-.++..+++.||++|..-.    |..=+ |.|.|+|+|+--..
T Consensus       210 ~~~vvl~~g~~~e~~~~~~i~~~~--~-~~~l~g~~sl~el~ali~~a~l~I~~DS----G~~Hl-Aaa~g~P~v~lfg~  281 (326)
T 2gt1_A          210 GIRIKLPWGAPHEEERAKRLAEGF--A-YVEVLPKMSLEGVARVLAGAKFVVSVDT----GLSHL-TAALDRPNITVYGP  281 (326)
T ss_dssp             CCEEEECCSSHHHHHHHHHHHTTC--T-TEEECCCCCHHHHHHHHHTCSEEEEESS----HHHHH-HHHTTCCEEEEESS
T ss_pred             CCcEEEecCCHHHHHHHHHHHhhC--C-cccccCCCCHHHHHHHHHhCCEEEecCC----cHHHH-HHHcCCCEEEEECC
Confidence            57788873344 333444444433  2 4677898899999999999999996532    44444 77899999974322


Q ss_pred             Cccccc-c--CCceEE-------eCCCHHHHHHHHHHHHhc
Q 027511           83 GVPEVL-P--DDMVVL-------AEPDPGDMVLAIRKAISL  113 (222)
Q Consensus        83 g~~e~i-~--~~~~g~-------~~~~~~~la~~i~~ll~~  113 (222)
                      ..+... +  +....+       ..-+++++.+++.++++.
T Consensus       282 t~p~~~~P~~~~~~~~~~~~~cm~~I~~~~V~~~i~~~l~~  322 (326)
T 2gt1_A          282 TDPGLIGGYGKNQMVCRAPGNELSQLTANAVKQFIEENAEK  322 (326)
T ss_dssp             SCHHHHCCCSSSEEEEECGGGCGGGCCHHHHHHHHHHTTTT
T ss_pred             CChhhcCCCCCCceEecCCcccccCCCHHHHHHHHHHHHHH
Confidence            211111 1  111111       122678888888877754

>2acv_A Triterpene UDP-glucosyl transferase UGT71G1; glycosyltransferase; HET: UDP; 2.00A {Medicago truncatula} SCOP: c.87.1.10 PDB: 2acw_A*

Probab=94.61  E-value=0.12  Score=45.01  Aligned_cols=76  Identities=14%  Similarity=0.087  Sum_probs=52.2

Q ss_pred             CcEEEeCCCChhHHHHHHH--hccEEEEcCCCccccHHHHHHHHhCCcEEEeCCCC----cccc-ccCCceEEeC-----
Q 027511           30 DRVEMLGAVPHAQVRSVLI--SGHIFLNSSLTEAFCIAILEAASCGLLTVSTRVGG----VPEV-LPDDMVVLAE-----   97 (222)
Q Consensus        30 ~~V~~~g~v~~~~~~~ll~--~adv~v~~s~~E~~g~~ilEAma~G~PvVa~~~gg----~~e~-i~~~~~g~~~-----   97 (222)
                      +++...+++|+.   .+|.  ++++||    +-+-.+++.||+++|+|+|+....+    .... +...+.|+..     
T Consensus       332 ~~~~v~~w~pq~---~vL~h~~~~~fv----th~G~~s~~Eal~~GvP~i~~P~~~dQ~~Na~~lv~~~g~g~~l~~~~~  404 (463)
T 2acv_A          332 GKGMICGWAPQV---EVLAHKAIGGFV----SHCGWNSILESMWFGVPILTWPIYAEQQLNAFRLVKEWGVGLGLRVDYR  404 (463)
T ss_dssp             CSEEEESSCCHH---HHHHSTTEEEEE----ECCCHHHHHHHHHTTCCEEECCCSTTHHHHHHHHHHTSCCEEESCSSCC
T ss_pred             CCEEEEccCCHH---HHhCCCccCeEE----ecCCchhHHHHHHcCCCeeeccchhhhHHHHHHHHHHcCeEEEEecccC
Confidence            467777787754   4565  577777    4555689999999999999876532    2223 3344444322     


Q ss_pred             -----CCHHHHHHHHHHHHh
Q 027511           98 -----PDPGDMVLAIRKAIS  112 (222)
Q Consensus        98 -----~~~~~la~~i~~ll~  112 (222)
                           -+.+++.++|.++++
T Consensus       405 ~~~~~~~~~~l~~ai~~ll~  424 (463)
T 2acv_A          405 KGSDVVAAEEIEKGLKDLMD  424 (463)
T ss_dssp             TTCCCCCHHHHHHHHHHHTC
T ss_pred             CCCccccHHHHHHHHHHHHh
Confidence                 267999999999995

>2jzc_A UDP-N-acetylglucosamine transferase subunit ALG13; rossmann-like fold, endoplasmic reticulum, glycosyltransferase, structural genomics; NMR {Saccharomyces cerevisiae} PDB: 2ks6_A

Probab=93.69  E-value=0.024  Score=44.88  Aligned_cols=74  Identities=11%  Similarity=0.056  Sum_probs=49.2

Q ss_pred             cEEEeCCCChhHHHHHHH-hccEEEEcCCCccccHHHHHHHHhCCcEEEeCCCCc--------cccccCCceEEeCCCHH
Q 027511           31 RVEMLGAVPHAQVRSVLI-SGHIFLNSSLTEAFCIAILEAASCGLLTVSTRVGGV--------PEVLPDDMVVLAEPDPG  101 (222)
Q Consensus        31 ~V~~~g~v~~~~~~~ll~-~adv~v~~s~~E~~g~~ilEAma~G~PvVa~~~gg~--------~e~i~~~~~g~~~~~~~  101 (222)
                      ++...+++  +++..+|. .||++|    +-+-..++.|++++|+|.|.-.....        .+.+.+.+.++.. +++
T Consensus       115 ~v~v~~f~--~~m~~~l~~~AdlvI----shaGagTv~Eal~~G~P~IvVP~~~~~~~HQ~~nA~~l~~~G~~~~~-~~~  187 (224)
T 2jzc_A          115 KVIGFDFS--TKMQSIIRDYSDLVI----SHAGTGSILDSLRLNKPLIVCVNDSLMDNHQQQIADKFVELGYVWSC-APT  187 (224)
T ss_dssp             EEEECCSS--SSHHHHHHHHCSCEE----ESSCHHHHHHHHHTTCCCCEECCSSCCCCHHHHHHHHHHHHSCCCEE-CSC
T ss_pred             eEEEeecc--chHHHHHHhcCCEEE----ECCcHHHHHHHHHhCCCEEEEcCcccccchHHHHHHHHHHCCCEEEc-CHH
Confidence            45666776  78999999 999999    45567899999999999997654321        1112111112222 566


Q ss_pred             HHHHHHHHHH
Q 027511          102 DMVLAIRKAI  111 (222)
Q Consensus       102 ~la~~i~~ll  111 (222)
                      .+.++|.++-
T Consensus       188 ~L~~~i~~l~  197 (224)
T 2jzc_A          188 ETGLIAGLRA  197 (224)
T ss_dssp             TTTHHHHHHH
T ss_pred             HHHHHHHHHH
Confidence            7777777763

>2vch_A Hydroquinone glucosyltransferase; glycosyltransferase, N-glucosyltransferase, UDP-glucose- dependent, plant glycosyltransferase; HET: UDP; 1.45A {Arabidopsis thaliana} SCOP: c.87.1.10 PDB: 2vce_A* 2vg8_A*

Probab=93.57  E-value=0.26  Score=43.17  Aligned_cols=77  Identities=14%  Similarity=0.007  Sum_probs=51.0

Q ss_pred             EEEeCCCChhHHHHHHHhccEEEEcCCCccccHHHHHHHHhCCcEEEeCCCC----ccccc-cCCceEEeC-------CC
Q 027511           32 VEMLGAVPHAQVRSVLISGHIFLNSSLTEAFCIAILEAASCGLLTVSTRVGG----VPEVL-PDDMVVLAE-------PD   99 (222)
Q Consensus        32 V~~~g~v~~~~~~~ll~~adv~v~~s~~E~~g~~ilEAma~G~PvVa~~~gg----~~e~i-~~~~~g~~~-------~~   99 (222)
                      +...+++|+.   .+|..+++.++-  +-+-.++++||+++|+|+|+....+    ....+ ..-+.|+..       -+
T Consensus       341 ~~v~~w~Pq~---~vL~h~~v~~fv--tHgG~~S~~Eal~~GvP~i~~P~~~DQ~~na~~l~~~~G~g~~l~~~~~~~~~  415 (480)
T 2vch_A          341 FVIPFWAPQA---QVLAHPSTGGFL--THCGWNSTLESVVSGIPLIAWPLYAEQKMNAVLLSEDIRAALRPRAGDDGLVR  415 (480)
T ss_dssp             EEEESCCCHH---HHHHSTTEEEEE--ECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHTTCCEECCCCCTTSCCC
T ss_pred             EEEeCccCHH---HHhCCCCcCeEE--ecccchhHHHHHHcCCCEEeccccccchHHHHHHHHHhCeEEEeecccCCccC
Confidence            3455698764   788888853222  3344578999999999999876532    22232 343444321       26


Q ss_pred             HHHHHHHHHHHHhc
Q 027511          100 PGDMVLAIRKAISL  113 (222)
Q Consensus       100 ~~~la~~i~~ll~~  113 (222)
                      .+++.++|.+++++
T Consensus       416 ~~~l~~av~~vl~~  429 (480)
T 2vch_A          416 REEVARVVKGLMEG  429 (480)
T ss_dssp             HHHHHHHHHHHHTS
T ss_pred             HHHHHHHHHHHhcC
Confidence            79999999999974

>4fyk_A Deoxyribonucleoside 5'-monophosphate N-glycosidas; hydrolas; HET: SRA; 1.79A {Rattus norvegicus} PDB: 4fyh_A* 4fyi_A* 2klh_A*

Probab=90.83  E-value=3.7  Score=30.14  Aligned_cols=106  Identities=12%  Similarity=0.070  Sum_probs=55.7

Q ss_pred             eEEEEEcC---Cc-cHHHHHHHHHHcCCCCcEEEeCCCChh--------------H----HHHHHHhccEEEEcCCCccc
Q 027511            5 VRFIVGGD---GP-KRVRLEEMREKHSLQDRVEMLGAVPHA--------------Q----VRSVLISGHIFLNSSLTEAF   62 (222)
Q Consensus         5 ~~lvi~G~---g~-~~~~l~~~~~~~~l~~~V~~~g~v~~~--------------~----~~~ll~~adv~v~~s~~E~~   62 (222)
                      .++.++|.   +. ....++++++.+.-.+.| +..++..+              +    =.+.+++||++|.--. +.-
T Consensus         3 mkIYlAGP~f~~~e~~~~~~~i~~~L~~~G~V-l~~hv~~~~l~~~g~~~~~~~~~i~~~d~~~i~~aD~vvA~l~-~~d   80 (152)
T 4fyk_A            3 RSVYFCGSIRGGREDQALYARIVSRLRRYGKV-LTEHVADAELEPLGEEAAGGDQFIHEQNLNWLQQADVVVAEVT-QPS   80 (152)
T ss_dssp             CEEEEECCSTTCCTTHHHHHHHHHHHTTTSEE-CCCC-------------CCCHHHHHHHHHHHHHHCSEEEEECS-SCC
T ss_pred             ceEEEECCCCCcHHHHHHHHHHHHHHHHcCcc-cccccCchhhhhccccccCCHHHHHHHHHHHHHHCCEEEEeCC-CCC
Confidence            57899992   22 335556666666444433 33333221              1    1356788999876322 444


Q ss_pred             cHHHHH---HHHhCCcEEEeCCCCcccccc-------C-CceE-EeCCCHHHHHHHHHHHHhc
Q 027511           63 CIAILE---AASCGLLTVSTRVGGVPEVLP-------D-DMVV-LAEPDPGDMVLAIRKAISL  113 (222)
Q Consensus        63 g~~ilE---Ama~G~PvVa~~~gg~~e~i~-------~-~~~g-~~~~~~~~la~~i~~ll~~  113 (222)
                      ..+.+|   |.+.|+||++-........+.       + ...- ....+ +++.+.|.+.++.
T Consensus        81 ~Gt~~EiG~A~algkPV~~l~~~~~~~~ls~mi~G~~~~~~~~~~~Y~~-~el~~il~~f~~~  142 (152)
T 4fyk_A           81 LGVGYELGRAVALGKPILCLFRPQSGRVLSAMIRGAADGSRFQVWDYAE-GEVETMLDRYFEA  142 (152)
T ss_dssp             HHHHHHHHHHHHTTCCEEEEECGGGSCCCCHHHHHHCCSSSEEEEECCT-TCHHHHHHHHHC-
T ss_pred             CCHHHHHHHHHHcCCeEEEEEeCCccchhHHHHcCCCCCCeEEEEEecH-HHHHHHHHHHHHh
Confidence            445555   678999999832221111121       1 1112 23334 7888888777754

>4f3y_A DHPR, dihydrodipicolinate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis}

Probab=90.20  E-value=0.71  Score=37.42  Aligned_cols=78  Identities=15%  Similarity=0.182  Sum_probs=56.3

Q ss_pred             ceEEEEEc-CCccHHHHHHHHHHcCCCCcEEEeCCCC-----------------------hhHHHHHHHhccEEEEcCCC
Q 027511            4 KVRFIVGG-DGPKRVRLEEMREKHSLQDRVEMLGAVP-----------------------HAQVRSVLISGHIFLNSSLT   59 (222)
Q Consensus         4 ~~~lvi~G-~g~~~~~l~~~~~~~~l~~~V~~~g~v~-----------------------~~~~~~ll~~adv~v~~s~~   59 (222)
                      .+++.|+| .|..-..+.+.+.+.   +.+.+.+-+.                       .+++.+++..+|+.|..+..
T Consensus         7 mikV~V~Ga~G~MG~~i~~~l~~~---~~~eLv~~~d~~~~~~~G~d~gel~g~~~gv~v~~dl~~ll~~~DVVIDfT~p   83 (272)
T 4f3y_A            7 SMKIAIAGASGRMGRMLIEAVLAA---PDATLVGALDRTGSPQLGQDAGAFLGKQTGVALTDDIERVCAEADYLIDFTLP   83 (272)
T ss_dssp             CEEEEESSTTSHHHHHHHHHHHHC---TTEEEEEEBCCTTCTTTTSBTTTTTTCCCSCBCBCCHHHHHHHCSEEEECSCH
T ss_pred             ccEEEEECCCCHHHHHHHHHHHhC---CCCEEEEEEEecCcccccccHHHHhCCCCCceecCCHHHHhcCCCEEEEcCCH
Confidence            47899999 888888887776653   2344443221                       25678888999999987776


Q ss_pred             ccccHHHHHHHHhCCcEEEeCCCCc
Q 027511           60 EAFCIAILEAASCGLLTVSTRVGGV   84 (222)
Q Consensus        60 E~~g~~ilEAma~G~PvVa~~~gg~   84 (222)
                      +..--.+..++..|+|+|....|-.
T Consensus        84 ~a~~~~~~~al~~G~~vVigTTG~s  108 (272)
T 4f3y_A           84 EGTLVHLDAALRHDVKLVIGTTGFS  108 (272)
T ss_dssp             HHHHHHHHHHHHHTCEEEECCCCCC
T ss_pred             HHHHHHHHHHHHcCCCEEEECCCCC
Confidence            6555566788999999998776643

>3ijp_A DHPR, dihydrodipicolinate reductase; ssgcid, SBRI, decode biostructures, niaid, amino-acid biosynthesis, cytoplasm; HET: NAP; 2.30A {Bartonella henselae}

Probab=87.64  E-value=0.86  Score=37.28  Aligned_cols=77  Identities=19%  Similarity=0.173  Sum_probs=54.7

Q ss_pred             ceEEEEEc-CCccHHHHHHHHHHcCCCCcEEEeCCCCh------------------------hHHHHHHHhccEEEEcCC
Q 027511            4 KVRFIVGG-DGPKRVRLEEMREKHSLQDRVEMLGAVPH------------------------AQVRSVLISGHIFLNSSL   58 (222)
Q Consensus         4 ~~~lvi~G-~g~~~~~l~~~~~~~~l~~~V~~~g~v~~------------------------~~~~~ll~~adv~v~~s~   58 (222)
                      .+|+.|+| .|..-..+.+.+.+.   +.+.+.|-+..                        +++.+++..+|+.|.-+.
T Consensus        21 ~irV~V~Ga~GrMGr~i~~~v~~~---~~~eLvg~vd~~~~~~~G~d~gel~G~~~~gv~v~~dl~~ll~~aDVvIDFT~   97 (288)
T 3ijp_A           21 SMRLTVVGANGRMGRELITAIQRR---KDVELCAVLVRKGSSFVDKDASILIGSDFLGVRITDDPESAFSNTEGILDFSQ   97 (288)
T ss_dssp             CEEEEESSTTSHHHHHHHHHHHTC---SSEEEEEEBCCTTCTTTTSBGGGGTTCSCCSCBCBSCHHHHTTSCSEEEECSC
T ss_pred             CeEEEEECCCCHHHHHHHHHHHhC---CCCEEEEEEecCCccccccchHHhhccCcCCceeeCCHHHHhcCCCEEEEcCC
Confidence            47899999 888887777776643   23444443321                        367888889999997776


Q ss_pred             CccccHHHHHHHHhCCcEEEeCCCC
Q 027511           59 TEAFCIAILEAASCGLLTVSTRVGG   83 (222)
Q Consensus        59 ~E~~g~~ilEAma~G~PvVa~~~gg   83 (222)
                      .+..--.+..++..|+|+|....|-
T Consensus        98 p~a~~~~~~~~l~~Gv~vViGTTG~  122 (288)
T 3ijp_A           98 PQASVLYANYAAQKSLIHIIGTTGF  122 (288)
T ss_dssp             HHHHHHHHHHHHHHTCEEEECCCCC
T ss_pred             HHHHHHHHHHHHHcCCCEEEECCCC
Confidence            5554445567889999999877664

>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}

Probab=86.96  E-value=5.9  Score=33.61  Aligned_cols=83  Identities=14%  Similarity=0.167  Sum_probs=57.5

Q ss_pred             CceEEEEEcCCccHHHHHHHHHHcCCCCcEEEeCCCC--------------------------------------hhHHH
Q 027511            3 VKVRFIVGGDGPKRVRLEEMREKHSLQDRVEMLGAVP--------------------------------------HAQVR   44 (222)
Q Consensus         3 p~~~lvi~G~g~~~~~l~~~~~~~~l~~~V~~~g~v~--------------------------------------~~~~~   44 (222)
                      |..+++|+|.|..-....+.+..+|.  +|.....-+                                      .+.+.
T Consensus       183 ~~~kV~ViG~G~iG~~aa~~a~~lGa--~V~v~D~~~~~l~~~~~lGa~~~~l~~~~~~~~gya~~~~~~~~~~~~~~l~  260 (381)
T 3p2y_A          183 KPASALVLGVGVAGLQALATAKRLGA--KTTGYDVRPEVAEQVRSVGAQWLDLGIDAAGEGGYARELSEAERAQQQQALE  260 (381)
T ss_dssp             CCCEEEEESCSHHHHHHHHHHHHHTC--EEEEECSSGGGHHHHHHTTCEECCCC-------------CHHHHHHHHHHHH
T ss_pred             CCCEEEEECchHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHcCCeEEeccccccccccchhhhhHHHHhhhHHHHH
Confidence            56789999999877777777777765  354433211                                      23567


Q ss_pred             HHHHhccEEEEcCCCc------cccHHHHHHHHhCCcEE--EeCCCCcccc
Q 027511           45 SVLISGHIFLNSSLTE------AFCIAILEAASCGLLTV--STRVGGVPEV   87 (222)
Q Consensus        45 ~ll~~adv~v~~s~~E------~~g~~ilEAma~G~PvV--a~~~gg~~e~   87 (222)
                      +.+..+|+++.+....      -+.-..++.|.-|.-+|  +.+.||..|.
T Consensus       261 e~l~~aDIVI~tv~iPg~~ap~Lvt~emv~~MkpGsVIVDvA~d~GG~~e~  311 (381)
T 3p2y_A          261 DAITKFDIVITTALVPGRPAPRLVTAAAATGMQPGSVVVDLAGETGGNCEL  311 (381)
T ss_dssp             HHHTTCSEEEECCCCTTSCCCCCBCHHHHHTSCTTCEEEETTGGGTCSBTT
T ss_pred             HHHhcCCEEEECCCCCCcccceeecHHHHhcCCCCcEEEEEeCCCCCcccc
Confidence            7889999999764321      24567888888888777  5667887774

>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}

Probab=82.84  E-value=4.6  Score=34.62  Aligned_cols=84  Identities=17%  Similarity=0.175  Sum_probs=56.6

Q ss_pred             CceEEEEEcCCccHHHHHHHHHHcCCCCcEEEeCCC-----------------------------------C-------h
Q 027511            3 VKVRFIVGGDGPKRVRLEEMREKHSLQDRVEMLGAV-----------------------------------P-------H   40 (222)
Q Consensus         3 p~~~lvi~G~g~~~~~l~~~~~~~~l~~~V~~~g~v-----------------------------------~-------~   40 (222)
                      ++.+++|+|.|..-....+.+..+|.  +|.....-                                   +       .
T Consensus       189 ~~~kV~ViG~G~iG~~aa~~a~~lGa--~V~v~D~~~~~l~~~~~~G~~~~~~~~~~~~d~~~~~~ya~e~s~~~~~~~~  266 (405)
T 4dio_A          189 PAAKIFVMGAGVAGLQAIATARRLGA--VVSATDVRPAAKEQVASLGAKFIAVEDEEFKAAETAGGYAKEMSGEYQVKQA  266 (405)
T ss_dssp             CCCEEEEECCSHHHHHHHHHHHHTTC--EEEEECSSTTHHHHHHHTTCEECCCCC-----------------CHHHHHHH
T ss_pred             CCCEEEEECCcHHHHHHHHHHHHCCC--EEEEEcCCHHHHHHHHHcCCceeecccccccccccccchhhhcchhhhhhhH
Confidence            46788999988777666666666654  23332111                                   1       1


Q ss_pred             hHHHHHHHhccEEEEcCCCc------cccHHHHHHHHhCCcEE--EeCCCCccccc
Q 027511           41 AQVRSVLISGHIFLNSSLTE------AFCIAILEAASCGLLTV--STRVGGVPEVL   88 (222)
Q Consensus        41 ~~~~~ll~~adv~v~~s~~E------~~g~~ilEAma~G~PvV--a~~~gg~~e~i   88 (222)
                      +.+.+.+..+|+++.+....      -+.-..++.|.-|.-+|  +.+.||..|..
T Consensus       267 ~~l~e~l~~aDVVI~tvlipg~~ap~Lvt~emv~~Mk~GsVIVDvA~d~GG~~e~t  322 (405)
T 4dio_A          267 ALVAEHIAKQDIVITTALIPGRPAPRLVTREMLDSMKPGSVVVDLAVERGGNIEGA  322 (405)
T ss_dssp             HHHHHHHHTCSEEEECCCCSSSCCCCCBCHHHHTTSCTTCEEEETTGGGTCSBTTC
T ss_pred             hHHHHHhcCCCEEEECCcCCCCCCCEEecHHHHhcCCCCCEEEEEeCCCCCCcccc
Confidence            35778889999999874422      25668889999898888  45578877764

>1rcu_A Conserved hypothetical protein VT76; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.50A {Thermotoga maritima} SCOP: c.129.1.1

Probab=81.73  E-value=2.8  Score=32.11  Aligned_cols=70  Identities=16%  Similarity=0.103  Sum_probs=42.7

Q ss_pred             hHHHHHHHhccEEEEcCCCccccHHHHHHHHhCCcEEEeCCCC-ccccc----cCC--------ceEEeCCCHHHHHHHH
Q 027511           41 AQVRSVLISGHIFLNSSLTEAFCIAILEAASCGLLTVSTRVGG-VPEVL----PDD--------MVVLAEPDPGDMVLAI  107 (222)
Q Consensus        41 ~~~~~ll~~adv~v~~s~~E~~g~~ilEAma~G~PvVa~~~gg-~~e~i----~~~--------~~g~~~~~~~~la~~i  107 (222)
                      +...-+...+|.+|...-.-+-=..+.||+..|+||+.-+..| ..+.+    .++        ......+|++++.+.|
T Consensus       110 ~Rk~~m~~~sda~IvlpGG~GTL~E~~eal~~~kPV~lln~~g~w~~~l~~~~~~G~fi~~~~~~~i~~~~~~ee~~~~l  189 (195)
T 1rcu_A          110 MRSFVLLRNADVVVSIGGEIGTAIEILGAYALGKPVILLRGTGGWTDRISQVLIDGKYLDNRRIVEIHQAWTVEEAVQII  189 (195)
T ss_dssp             HHHHHHHTTCSEEEEESCCHHHHHHHHHHHHTTCCEEEETTSCHHHHHGGGGCBTTTBSSTTCCSCEEEESSHHHHHHHH
T ss_pred             HHHHHHHHhCCEEEEecCCCcHHHHHHHHHhcCCCEEEECCCCccHHHHHHHHHcCCcCCHHHcCeEEEeCCHHHHHHHH
Confidence            3445556678998764432122245688899999999987544 22222    222        1235667899988887


Q ss_pred             HHH
Q 027511          108 RKA  110 (222)
Q Consensus       108 ~~l  110 (222)
                      .++
T Consensus       190 ~~~  192 (195)
T 1rcu_A          190 EQI  192 (195)
T ss_dssp             HTC
T ss_pred             HHH
Confidence            643

>1p9l_A Dihydrodipicolinate reductase; oxidoreductase, lysine biosynthesis, NADH binding specificity, TB structural genomics consortium; HET: NAD PDC PG4; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3 PDB: 1c3v_A* 1yl5_A 1yl7_A* 1yl6_A*

Probab=80.35  E-value=14  Score=29.12  Aligned_cols=75  Identities=9%  Similarity=0.087  Sum_probs=48.8

Q ss_pred             eEEEEEc-CCccHHHHHHHHHHcCCCCcEEEeCCC-ChhHHHHHHH-hccEEEEcCCCccccHHHHHHHHhCCcEEEeCC
Q 027511            5 VRFIVGG-DGPKRVRLEEMREKHSLQDRVEMLGAV-PHAQVRSVLI-SGHIFLNSSLTEAFCIAILEAASCGLLTVSTRV   81 (222)
Q Consensus         5 ~~lvi~G-~g~~~~~l~~~~~~~~l~~~V~~~g~v-~~~~~~~ll~-~adv~v~~s~~E~~g~~ilEAma~G~PvVa~~~   81 (222)
                      +++.|+| .|..-..+.+.+.+..   ...+.+.+ ..+++..++. .+|+.|-.+..+..--.+..+...|+|+|....
T Consensus         1 mkV~V~Ga~G~mG~~i~~~~~~~~---~~elva~~d~~~dl~~~~~~~~DvvIDfT~p~a~~~~~~~a~~~g~~~VigTT   77 (245)
T 1p9l_A            1 MRVGVLGAKGKVGTTMVRAVAAAD---DLTLSAELDAGDPLSLLTDGNTEVVIDFTHPDVVMGNLEFLIDNGIHAVVGTT   77 (245)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHCT---TCEEEEEECTTCCTHHHHHTTCCEEEECSCTTTHHHHHHHHHHTTCEEEECCC
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCC---CCEEEEEEccCCCHHHHhccCCcEEEEccChHHHHHHHHHHHHcCCCEEEcCC
Confidence            4788999 5888777777765431   12332222 1345666665 789999666666655455567889999998655


Q ss_pred             C
Q 027511           82 G   82 (222)
Q Consensus        82 g   82 (222)
                      |
T Consensus        78 G   78 (245)
T 1p9l_A           78 G   78 (245)
T ss_dssp             C
T ss_pred             C
Confidence            5

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	222
d1rzua_	477	c.87.1.8 (A:) Glycogen synthase 1, GlgA {Agrobacte	1e-17
d2bisa1	437	c.87.1.8 (A:1-437) Glycogen synthase 1, GlgA {Pyro	2e-14
d1uqta_	456	c.87.1.6 (A:) Trehalose-6-phosphate synthase, OtsA	2e-09

>d1rzua_ c.87.1.8 (A:) Glycogen synthase 1, GlgA {Agrobacterium tumefaciens [TaxId: 358]} Length = 477

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Glycosyl transferases group 1
domain: Glycogen synthase 1, GlgA
species: Agrobacterium tumefaciens [TaxId: 358]

 Score = 78.9 bits (193), Expect = 1e-17
 Identities = 28/160 (17%), Positives = 51/160 (31%), Gaps = 13/160 (8%)

Query: 1   MRVKVRFIVGGDGPKRVRLEEMREKHSLQDRVEMLGAVPHAQVRSVLISGHIFLNSSLTE 60
           + +  R +V G G   +    +        RV +           +       +  S  E
Sbjct: 317 VSLGGRLVVLGAGDVALEGALLAAASRHHGRVGVAIGYNEPLSHLMQAGCDAIIIPSRFE 376

Query: 61  AFCIAILEAASCGLLTVSTRVGGVPEVLPDDM-----------VVLAEPDPGDMVLAIRK 109
              +  L A   G + V  R GG+ + + D             V  +      +  AIR+
Sbjct: 377 PCGLTQLYALRYGCIPVVARTGGLADTVIDANHAALASKAATGVQFSPVTLDGLKQAIRR 436

Query: 110 AISLL--PKIDPQVMHERMKKLYNWHDVAKRTEIVYDRAL 147
            +     PK+  Q+    MK   +W   A     +Y + +
Sbjct: 437 TVRYYHDPKLWTQMQKLGMKSDVSWEKSAGLYAALYSQLI 476

>d2bisa1 c.87.1.8 (A:1-437) Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxId: 29292]} Length = 437

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Glycosyl transferases group 1
domain: Glycogen synthase 1, GlgA
species: Pyrococcus abyssi [TaxId: 29292]

 Score = 69.1 bits (167), Expect = 2e-14
 Identities = 35/149 (23%), Positives = 68/149 (45%), Gaps = 5/149 (3%)

Query: 4   KVRFIVGGDGPKRVRLEEMREKHSLQDRVEMLGAVPHAQVRSVLISGHIFLNSSLTEAFC 63
           ++RFI+ G G   +       +    +   +   +    VR +  S    +  S  E F 
Sbjct: 283 EMRFIIIGKGDPELEGWARSLEEKHGNVKVITEMLSREFVRELYGSVDFVIIPSYFEPFG 342

Query: 64  IAILEAASCGLLTVSTRVGGVPEVLPDDMVVLAEP-DPGDMVLAIRKAISLLPKIDPQVM 122
           +  LEA   G + +++ VGG+ +++ ++  +L +  DPG++  AI KA+  L + D    
Sbjct: 343 LVALEAMCLGAIPIASAVGGLRDIITNETGILVKAGDPGELANAILKALE-LSRSDLSKF 401

Query: 123 HERMKKL---YNWHDVAKRTEIVYDRALE 148
            E  KK    ++W   A+R    Y  +++
Sbjct: 402 RENCKKRAMSFSWEKSAERYVKAYTGSID 430

>d1uqta_ c.87.1.6 (A:) Trehalose-6-phosphate synthase, OtsA {Escherichia coli [TaxId: 562]} Length = 456

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Trehalose-6-phosphate synthase, OtsA
domain: Trehalose-6-phosphate synthase, OtsA
species: Escherichia coli [TaxId: 562]

 Score = 54.5 bits (130), Expect = 2e-09
 Identities = 13/129 (10%), Positives = 39/129 (30%), Gaps = 15/129 (11%)

Query: 18  RLEEMREKHSLQDRVEMLGAVPHAQVRSVLISGHIFLNSSLTEAFCIAILEAASCGLLT- 76
           R+     +        +        +  +     + L + L +   +   E  +      
Sbjct: 319 RINGKYGQLGWTPLYYLNQHFDRKLLMKIFRYSDVGLVTPLRDGMNLVAKEYVAAQDPAN 378

Query: 77  ----VSTRVGGVPEVLPDDMVVLAEP-DPGDMVLAIRKAISLLPKIDPQVMHERMKKLYN 131
               V ++  G    L     ++  P D  ++  A+ +A+++           R  ++ +
Sbjct: 379 PGVLVLSQFAGAANELTS--ALIVNPYDRDEVAAALDRALTM----SLAERISRHAEMLD 432

Query: 132 W---HDVAK 137
               +D+  
Sbjct: 433 VIVKNDINH 441

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	222
d1rzua_	477	Glycogen synthase 1, GlgA {Agrobacterium tumefacie	99.92
d2bisa1	437	Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxI	99.91
d2iw1a1	370	Lipopolysaccharide core biosynthesis protein RfaG	99.89
d2f9fa1	166	First mannosyl transferase WbaZ {Archaeoglobus ful	99.86
d2bfwa1	196	Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxI	99.85
d1uqta_	456	Trehalose-6-phosphate synthase, OtsA {Escherichia	99.67
d1pn3a_	391	TDP-epi-vancosaminyltransferase GtfA {Amycolatopsi	98.02
d1rrva_	401	TDP-vancosaminyltransferase GftD {Amycolatopsis or	98.02
d1iira_	401	UDP-glucosyltransferase GtfB {Amycolatopsis orient	97.98
d1v4va_	373	UDP-N-acetylglucosamine 2-epimerase {Thermus therm	97.45
d1f0ka_	351	Peptidoglycan biosynthesis glycosyltransferase Mur	97.4
d1o6ca_	377	UDP-N-acetylglucosamine 2-epimerase {Bacillus subt	97.03
d2pq6a1	473	(Iso)flavonoid glycosyltransferase {Medicago trunc	96.77
d2vcha1	471	Hydroquinone glucosyltransferase {Thale cress (Ara	96.52
d2acva1	461	Triterpene UDP-glucosyl transferase UGT71G1 {Medic	96.24
d1f6da_	376	UDP-N-acetylglucosamine 2-epimerase {Escherichia c	96.0
d2c1xa1	450	UDP glucose:flavonoid 3-o-glucosyltransferase {Gra	95.67
d1l5wa_	796	Maltodextrin phosphorylase (MALP) {Escherichia col	95.2
d2gj4a1	824	Glycogen phosphorylase {Rabbit (Oryctolagus cunicu	94.93
d1ygpa_	876	Glycogen phosphorylase {Baker's yeast (Saccharomyc	94.65
d1pswa_	348	ADP-heptose LPS heptosyltransferase II {Escherichi	94.4
d1yl7a1	135	Dihydrodipicolinate reductase {Mycobacterium tuber	89.49
d1kjqa2	111	Glycinamide ribonucleotide transformylase PurT, N-	89.17
d2ez9a1	183	Pyruvate oxidase {Lactobacillus plantarum [TaxId:	86.48
d1ybha1	179	Acetohydroxyacid synthase catalytic subunit {Thale	85.05
d1j4aa1	197	D-lactate dehydrogenase {Lactobacillus helveticus	83.37
d1t9ba1	171	Acetohydroxyacid synthase catalytic subunit {Baker	80.57

>d1rzua_ c.87.1.8 (A:) Glycogen synthase 1, GlgA {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Glycosyl transferases group 1
domain: Glycogen synthase 1, GlgA
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=99.92  E-value=1.9e-25  Score=195.76  Aligned_cols=145  Identities=18%  Similarity=0.194  Sum_probs=118.9

Q ss_pred             ceEEEEEcCCccHHHHHHHHHHcCCCCcEEEeCCCChhHHHHHHHhccEEEEcCCCccccHHHHHHHHhCCcEEEeCCCC
Q 027511            4 KVRFIVGGDGPKRVRLEEMREKHSLQDRVEMLGAVPHAQVRSVLISGHIFLNSSLTEAFCIAILEAASCGLLTVSTRVGG   83 (222)
Q Consensus         4 ~~~lvi~G~g~~~~~l~~~~~~~~l~~~V~~~g~v~~~~~~~ll~~adv~v~~s~~E~~g~~ilEAma~G~PvVa~~~gg   83 (222)
                      +.+++++|.|+.....+......++.++|.+.+..+.++...++++||++|+||.+|+||++++|||+||+|||+|+.||
T Consensus       320 ~~~l~~~G~G~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~aD~~v~PS~~E~fglv~lEAma~G~PvVas~~GG  399 (477)
T d1rzua_         320 GGRLVVLGAGDVALEGALLAAASRHHGRVGVAIGYNEPLSHLMQAGCDAIIIPSRFEPCGLTQLYALRYGCIPVVARTGG  399 (477)
T ss_dssp             TCEEEEEECBCHHHHHHHHHHHHHTTTTEEEEESCCHHHHHHHHHHCSEEEECCSCCSSCSHHHHHHHHTCEEEEESSHH
T ss_pred             CCeEEEEecCCchHHHHHHHHHhhcCCeEEEEcccChhHHHHHHHhCccccCCccccCCCHHHHHHHHcCCCEEEcCCCC
Confidence            67899999987765555444444566899999999999999999999999999999999999999999999999999999


Q ss_pred             ccccccCCc---------eEE--eCCCHHHHHHHHHHHHhcCC--CCCHHHHHHHHHhcCCHHHHHHHHHHHHHHHhc
Q 027511           84 VPEVLPDDM---------VVL--AEPDPGDMVLAIRKAISLLP--KIDPQVMHERMKKLYNWHDVAKRTEIVYDRALE  148 (222)
Q Consensus        84 ~~e~i~~~~---------~g~--~~~~~~~la~~i~~ll~~~~--~~~~~~~~~~~~~~fs~~~~~~~~~~~~~~~~~  148 (222)
                      ++|++.++.         +|+  .+.|+++++++|.++++..+  ....+.+++.+++.|||+.++++++++|+++++
T Consensus       400 ~~E~v~d~~~~~~~~~~~~G~l~~~~d~~~la~ai~~~l~~~~~~~~~~~~~~~a~~~~fsw~~~a~~~~~lY~~ll~  477 (477)
T d1rzua_         400 LADTVIDANHAALASKAATGVQFSPVTLDGLKQAIRRTVRYYHDPKLWTQMQKLGMKSDVSWEKSAGLYAALYSQLIS  477 (477)
T ss_dssp             HHHHCCBCCHHHHHTTCCCBEEESSCSHHHHHHHHHHHHHHHTCHHHHHHHHHHHHTCCCBHHHHHHHHHHHHHHHTC
T ss_pred             CcceeecCCccccccCCCceEEeCCCCHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHhC
Confidence            999998763         443  33499999999999987543  222333334456789999999999999999874

>d2bisa1 c.87.1.8 (A:1-437) Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxId: 29292]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Glycosyl transferases group 1
domain: Glycogen synthase 1, GlgA
species: Pyrococcus abyssi [TaxId: 29292]

Probab=99.91  E-value=4.8e-24  Score=182.78  Aligned_cols=149  Identities=21%  Similarity=0.321  Sum_probs=121.1

Q ss_pred             CCceEEEEEcCCccHHHHHHHHHHcCCCCcEEEeCCCChhHHHHHHHhccEEEEcCCCccccHHHHHHHHhCCcEEEeCC
Q 027511            2 RVKVRFIVGGDGPKRVRLEEMREKHSLQDRVEMLGAVPHAQVRSVLISGHIFLNSSLTEAFCIAILEAASCGLLTVSTRV   81 (222)
Q Consensus         2 ~p~~~lvi~G~g~~~~~l~~~~~~~~l~~~V~~~g~v~~~~~~~ll~~adv~v~~s~~E~~g~~ilEAma~G~PvVa~~~   81 (222)
                      .|+++|+++|.|+...............+++.+.|.++++++..+++.||++++||..|++|++++|||+||+|||+++.
T Consensus       281 ~~~~~lvi~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~adi~v~~s~~e~~~~~~~Eama~G~Pvi~~~~  360 (437)
T d2bisa1         281 FQEMRFIIIGKGDPELEGWARSLEEKHGNVKVITEMLSREFVRELYGSVDFVIIPSYFEPFGLVALEAMCLGAIPIASAV  360 (437)
T ss_dssp             GGGEEEEEECCBCHHHHHHHHHHHHTCTTEEEECSCCCHHHHHHHHTTCSEEEECCSCCSSCHHHHHHHTTTCEEEEESC
T ss_pred             cccceeeeecccccccccchhhhccccccceeccccCcHHHHHHHHhhhccccccccccccchHHHHHHHCCCCEEEeCC
Confidence            47899999999876533222222223456788899999999999999999999999999999999999999999999999


Q ss_pred             CCccccccCCceEEeC-CCHHHHHHHHHHHHhc-CC--CCCHHHHHHHHHhcCCHHHHHHHHHHHHHHHhcCCC
Q 027511           82 GGVPEVLPDDMVVLAE-PDPGDMVLAIRKAISL-LP--KIDPQVMHERMKKLYNWHDVAKRTEIVYDRALECPN  151 (222)
Q Consensus        82 gg~~e~i~~~~~g~~~-~~~~~la~~i~~ll~~-~~--~~~~~~~~~~~~~~fs~~~~~~~~~~~~~~~~~~~~  151 (222)
                      ||..|++.++.+.++. .|+++++++|.+++++ ++  ..++.++++.+ +.|||++++++++++|++++++..
T Consensus       361 g~~~e~i~~~~G~~~~~~d~~~la~~i~~ll~~~~~~~~~~~~~~~~~~-~~~s~~~~a~~~~~iY~~~i~r~~  433 (437)
T d2bisa1         361 GGLRDIITNETGILVKAGDPGELANAILKALELSRSDLSKFRENCKKRA-MSFSWEKSAERYVKAYTGSIDRAF  433 (437)
T ss_dssp             TTHHHHCCTTTCEEECTTCHHHHHHHHHHHHTTTTSCTHHHHHHHHHHH-HHSCHHHHHHHHHHHHHTCSCCBC
T ss_pred             CCcHHhEECCcEEEECCCCHHHHHHHHHHHHhCCHHHHHHHHHHHHHHH-HhCCHHHHHHHHHHHHHHHHHhHh
Confidence            9999998875433444 4899999999999974 44  44566667665 569999999999999999887543

>d2iw1a1 c.87.1.8 (A:2-371) Lipopolysaccharide core biosynthesis protein RfaG {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Glycosyl transferases group 1
domain: Lipopolysaccharide core biosynthesis protein RfaG
species: Escherichia coli [TaxId: 562]

Probab=99.89  E-value=4.7e-24  Score=177.77  Aligned_cols=139  Identities=18%  Similarity=0.262  Sum_probs=118.4

Q ss_pred             CceEEEEEcCCccHHHHHHHHHHcCCCCcEEEeCCCChhHHHHHHHhccEEEEcCCCccccHHHHHHHHhCCcEEEeCCC
Q 027511            3 VKVRFIVGGDGPKRVRLEEMREKHSLQDRVEMLGAVPHAQVRSVLISGHIFLNSSLTEAFCIAILEAASCGLLTVSTRVG   82 (222)
Q Consensus         3 p~~~lvi~G~g~~~~~l~~~~~~~~l~~~V~~~g~v~~~~~~~ll~~adv~v~~s~~E~~g~~ilEAma~G~PvVa~~~g   82 (222)
                      ++..++++|+++....+++++++++..++++|+|+.  +++.++|++||++|+||..|+||++++|||+||+|||+++.|
T Consensus       225 ~~~~~~ii~g~~~~~~~~~~~~~~~~~~~v~~~g~~--~~~~~~~~~adv~v~ps~~E~~~~~~~EAma~G~PvI~s~~~  302 (370)
T d2iw1a1         225 RHNTLLFVVGQDKPRKFEALAEKLGVRSNVHFFSGR--NDVSELMAAADLLLHPAYQEAAGIVLLEAITAGLPVLTTAVC  302 (370)
T ss_dssp             HHTEEEEEESSSCCHHHHHHHHHHTCGGGEEEESCC--SCHHHHHHHCSEEEECCSCCSSCHHHHHHHHHTCCEEEETTS
T ss_pred             ccceeeeccccccccccccccccccccccccccccc--cccccccccccccccccccccccceeeecccCCeeEEEeCCC
Confidence            455677777777778899999999999999999975  689999999999999999999999999999999999999999


Q ss_pred             CccccccCCceE-Ee-CC-CHHHHHHHHHHHHhcCC--CCCHHHHHHHHHhcCCHHHHHHHHHHHHH
Q 027511           83 GVPEVLPDDMVV-LA-EP-DPGDMVLAIRKAISLLP--KIDPQVMHERMKKLYNWHDVAKRTEIVYD  144 (222)
Q Consensus        83 g~~e~i~~~~~g-~~-~~-~~~~la~~i~~ll~~~~--~~~~~~~~~~~~~~fs~~~~~~~~~~~~~  144 (222)
                      |.+|++.++.+| +. .+ |+++++++|.+++++++  ..++.++++.+++ |+|..+.+++.++|+
T Consensus       303 g~~e~i~~~~~G~l~~~~~d~~~la~~i~~ll~d~~~~~~~~~~ar~~~~~-~~~~~~~~~~~~ii~  368 (370)
T d2iw1a1         303 GYAHYIADANCGTVIAEPFSQEQLNEVLRKALTQSPLRMAWAENARHYADT-QDLYSLPEKAADIIT  368 (370)
T ss_dssp             TTTHHHHHHTCEEEECSSCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHH-SCCSCHHHHHHHHHH
T ss_pred             ChHHHhcCCCceEEEcCCCCHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHH-hChhHHHHHHHHHHh
Confidence            999999988776 33 33 89999999999999877  5677888877754 666666666666664

>d2f9fa1 c.87.1.8 (A:2-167) First mannosyl transferase WbaZ {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Glycosyl transferases group 1
domain: First mannosyl transferase WbaZ
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=99.86  E-value=6.1e-22  Score=150.29  Aligned_cols=123  Identities=19%  Similarity=0.203  Sum_probs=101.9

Q ss_pred             CCceEEEEEcCCcc---HHHHHHHHHHcCCCCcEEEeCCCChhHHHHHHHhccEEEEcCCCccccHHHHHHHHhCCcEEE
Q 027511            2 RVKVRFIVGGDGPK---RVRLEEMREKHSLQDRVEMLGAVPHAQVRSVLISGHIFLNSSLTEAFCIAILEAASCGLLTVS   78 (222)
Q Consensus         2 ~p~~~lvi~G~g~~---~~~l~~~~~~~~l~~~V~~~g~v~~~~~~~ll~~adv~v~~s~~E~~g~~ilEAma~G~PvVa   78 (222)
                      .|+.+++|+|.++.   .+.+.+.+.+.. .++|+|+|+++++++..+|+.||++|+||..|+||++++|||+||+|||+
T Consensus        37 l~~~~l~ivg~~~~~~~~~~~~~~~~~~~-~~~v~~~g~~~~~~~~~~~~~ad~~i~ps~~e~~~~~~~Ea~~~g~pvi~  115 (166)
T d2f9fa1          37 LQDEKLYIVGWFSKGDHAERYARKIMKIA-PDNVKFLGSVSEEELIDLYSRCKGLLCTAKDEDFGLTPIEAMASGKPVIA  115 (166)
T ss_dssp             CTTSCEEEEBCCCTTSTHHHHHHHHHHHS-CTTEEEEESCCHHHHHHHHHHCSEEEECCSSCCSCHHHHHHHHTTCCEEE
T ss_pred             hcCCeEEEEEecccccchhhhhhhhcccc-cCcEEEeeccccccccccccccccccccccccccccccccccccccccee
Confidence            46788999996544   344444444443 46899999999999999999999999999999999999999999999999


Q ss_pred             eCCCCccccccCCceEEe-CCCHHHHHHHHHHHHhcCCCCCHHHHHHHH
Q 027511           79 TRVGGVPEVLPDDMVVLA-EPDPGDMVLAIRKAISLLPKIDPQVMHERM  126 (222)
Q Consensus        79 ~~~gg~~e~i~~~~~g~~-~~~~~~la~~i~~ll~~~~~~~~~~~~~~~  126 (222)
                      ++.|+..|++.++.+|+. .+|+++++++|.+++++++. ...++.+++
T Consensus       116 s~~~~~~e~i~~~~~g~~~~~d~~~~~~~i~~l~~~~~~-~~~~~~~~a  163 (166)
T d2f9fa1         116 VNEGGFKETVINEKTGYLVNADVNEIIDAMKKVSKNPDK-FKKDCFRRA  163 (166)
T ss_dssp             ESSHHHHHHCCBTTTEEEECSCHHHHHHHHHHHHHCTTT-THHHHHHHH
T ss_pred             ecCCcceeeecCCcccccCCCCHHHHHHHHHHHHhCHHH-HHHHHHHHH
Confidence            999999999999887764 46999999999999998752 334444443

>d2bfwa1 c.87.1.8 (A:218-413) Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxId: 29292]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Glycosyl transferases group 1
domain: Glycogen synthase 1, GlgA
species: Pyrococcus abyssi [TaxId: 29292]

Probab=99.85  E-value=1.4e-21  Score=151.95  Aligned_cols=127  Identities=24%  Similarity=0.355  Sum_probs=102.7

Q ss_pred             CCceEEEEEcCCccH--HHHHHHHHHcCCCCcEEEeCCCChhHHHHHHHhccEEEEcCCCccccHHHHHHHHhCCcEEEe
Q 027511            2 RVKVRFIVGGDGPKR--VRLEEMREKHSLQDRVEMLGAVPHAQVRSVLISGHIFLNSSLTEAFCIAILEAASCGLLTVST   79 (222)
Q Consensus         2 ~p~~~lvi~G~g~~~--~~l~~~~~~~~l~~~V~~~g~v~~~~~~~ll~~adv~v~~s~~E~~g~~ilEAma~G~PvVa~   79 (222)
                      +|+++|+++|+|+..  ...+.+.++  +...+.+.|.++.+++..+|+.||++|+||..|++|++++|||+||+|||++
T Consensus        64 ~~~~~l~i~G~g~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~~~~~~di~v~ps~~e~~~~~~~Eam~~G~pvI~~  141 (196)
T d2bfwa1          64 FQEMRFIIIGKGDPELEGWARSLEEK--HGNVKVITEMLSREFVRELYGSVDFVIIPSYFEPFGLVALEAMCLGAIPIAS  141 (196)
T ss_dssp             GGGEEEEEECCBCHHHHHHHHHHHHH--CTTEEEECSCCCHHHHHHHHTTCSEEEECCSCCSSCHHHHHHHHTTCEEEEE
T ss_pred             CCCeEEEEEeecccchhhhhhhhhhc--cceeEEeeeccccccchhccccccccccccccccccccchhhhhcCceeeec
Confidence            478999999988654  233344444  3456778999999999999999999999999999999999999999999999


Q ss_pred             CCCCccccccCCceEEeCC-CHHHHHHHHHHHHhcCC---CCCHHHHHHHHHhcCC
Q 027511           80 RVGGVPEVLPDDMVVLAEP-DPGDMVLAIRKAISLLP---KIDPQVMHERMKKLYN  131 (222)
Q Consensus        80 ~~gg~~e~i~~~~~g~~~~-~~~~la~~i~~ll~~~~---~~~~~~~~~~~~~~fs  131 (222)
                      +.|+..|++.++.+.+..+ |+++++++|.++++..+   ..+..++++++.+ ||
T Consensus       142 ~~~~~~e~i~~~~g~~~~~~~~~~l~~~i~~~l~~~~~~~~~~~~~a~~~a~~-fs  196 (196)
T d2bfwa1         142 AVGGLRDIITNETGILVKAGDPGELANAILKALELSRSDLSKFRENCKKRAMS-FS  196 (196)
T ss_dssp             SCHHHHHHCCTTTCEEECTTCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH-TC
T ss_pred             CCCccceeecCCceeeECCCCHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHh-CC
Confidence            9999999997765444444 89999999999998543   5566677777644 65

>d1uqta_ c.87.1.6 (A:) Trehalose-6-phosphate synthase, OtsA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Trehalose-6-phosphate synthase, OtsA
domain: Trehalose-6-phosphate synthase, OtsA
species: Escherichia coli [TaxId: 562]

Probab=99.67  E-value=3.8e-16  Score=135.85  Aligned_cols=117  Identities=10%  Similarity=0.088  Sum_probs=102.5

Q ss_pred             CCCCcEEEeCCCChhHHHHHHHhccEEEEcCCCccccHHHHHHHHhCCc-----EEEeCCCCccccccCCceEEeCC-CH
Q 027511           27 SLQDRVEMLGAVPHAQVRSVLISGHIFLNSSLTEAFCIAILEAASCGLL-----TVSTRVGGVPEVLPDDMVVLAEP-DP  100 (222)
Q Consensus        27 ~l~~~V~~~g~v~~~~~~~ll~~adv~v~~s~~E~~g~~ilEAma~G~P-----vVa~~~gg~~e~i~~~~~g~~~~-~~  100 (222)
                      +..+.+.+.+.++.+++..+|+.||+++.||..|+||++++|||+||+|     +|+|+.+|..+.+.++  .++.| |+
T Consensus       328 ~~~~~v~~~~~~~~~~l~a~~~~Adv~v~~s~~EG~~lv~~Ea~a~~~p~~~g~lIlS~~~G~~~~l~~g--~lVnP~d~  405 (456)
T d1uqta_         328 GWTPLYYLNQHFDRKLLMKIFRYSDVGLVTPLRDGMNLVAKEYVAAQDPANPGVLVLSQFAGAANELTSA--LIVNPYDR  405 (456)
T ss_dssp             TBCSEEEECSCCCHHHHHHHHHHCSEEEECCSSBSCCHHHHHHHHHSCTTSCCEEEEETTBGGGGTCTTS--EEECTTCH
T ss_pred             CCCceeeccCCcCHHHHhHHHhhhceeecCCccCCCCcHHHHHHHhCCCCCCCcEEEeCCCCCHHHhCCe--EEECcCCH
Confidence            5667789999999999999999999999999999999999999999999     8999999999999763  34555 99


Q ss_pred             HHHHHHHHHHHhcCC---CCCHHHHHHHHHhcCCHHHHHHHHHHHHHHH
Q 027511          101 GDMVLAIRKAISLLP---KIDPQVMHERMKKLYNWHDVAKRTEIVYDRA  146 (222)
Q Consensus       101 ~~la~~i~~ll~~~~---~~~~~~~~~~~~~~fs~~~~~~~~~~~~~~~  146 (222)
                      ++++++|.++++++.   +.+.+++++.+.+ |++...++.+.+-++++
T Consensus       406 ~~~A~ai~~aL~~~~~er~~~~~~~~~~v~~-~~~~~W~~~fl~~l~~~  453 (456)
T d1uqta_         406 DEVAAALDRALTMSLAERISRHAEMLDVIVK-NDINHWQECFISDLKQI  453 (456)
T ss_dssp             HHHHHHHHHHHTCCHHHHHHHHHHHHHHHHH-TCHHHHHHHHHHHHHHS
T ss_pred             HHHHHHHHHHHcCCHHHHHHHHHHHHHHHHH-CCHHHHHHHHHHHHHhh
Confidence            999999999999865   4556778888864 89999888888877764

>d1pn3a_ c.87.1.5 (A:) TDP-epi-vancosaminyltransferase GtfA {Amycolatopsis orientalis [TaxId: 31958]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Gtf glycosyltransferase
domain: TDP-epi-vancosaminyltransferase GtfA
species: Amycolatopsis orientalis [TaxId: 31958]

Probab=98.02  E-value=5.3e-06  Score=67.75  Aligned_cols=78  Identities=12%  Similarity=0.041  Sum_probs=57.3

Q ss_pred             CCcEEEeCCCChhHHHHHHHhccEEEEcCCCccccHHHHHHHHhCCcEEEeCCCCc--------cccccCCceEE-eCC-
Q 027511           29 QDRVEMLGAVPHAQVRSVLISGHIFLNSSLTEAFCIAILEAASCGLLTVSTRVGGV--------PEVLPDDMVVL-AEP-   98 (222)
Q Consensus        29 ~~~V~~~g~v~~~~~~~ll~~adv~v~~s~~E~~g~~ilEAma~G~PvVa~~~gg~--------~e~i~~~~~g~-~~~-   98 (222)
                      +++|.+.+++++.   .++..+|++|..+    -.+++.|||++|+|+|+....+-        .+.+.+.+.|+ ... 
T Consensus       269 ~~~v~i~~~~p~~---~ll~~a~~~v~hg----G~~t~~Eal~~G~P~v~~P~~~d~~~eQ~~nA~~l~~~G~g~~l~~~  341 (391)
T d1pn3a_         269 GADCFVVGEVNLQ---ELFGRVAAAIHHD----SAGTTLLAMRAGIPQIVVRRVVDNVVEQAYHADRVAELGVGVAVDGP  341 (391)
T ss_dssp             CTTCCEESSCCHH---HHHTTSSCEEEES----CHHHHHHHHHHTCCEEEECSSCCBTTBCCHHHHHHHHHTSEEEECCS
T ss_pred             CCCEEEecccCHH---HHHhhccEEEecC----chHHHHHHHHhCCcEEEeccccCCcchHHHHHHHHHHCCCEEEcCcC
Confidence            4679999999754   5688999999553    35789999999999998765442        33444444443 222 


Q ss_pred             --CHHHHHHHHHHHHhc
Q 027511           99 --DPGDMVLAIRKAISL  113 (222)
Q Consensus        99 --~~~~la~~i~~ll~~  113 (222)
                        ++++++++|.+++++
T Consensus       342 ~~~~~~l~~~i~~~l~~  358 (391)
T d1pn3a_         342 VPTIDSLSAALDTALAP  358 (391)
T ss_dssp             SCCHHHHHHHHHHHTST
T ss_pred             CCCHHHHHHHHHHHhCH
Confidence              689999999999953

>d1rrva_ c.87.1.5 (A:) TDP-vancosaminyltransferase GftD {Amycolatopsis orientalis [TaxId: 31958]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Gtf glycosyltransferase
domain: TDP-vancosaminyltransferase GftD
species: Amycolatopsis orientalis [TaxId: 31958]

Probab=98.02  E-value=6.9e-06  Score=67.26  Aligned_cols=107  Identities=9%  Similarity=-0.022  Sum_probs=70.7

Q ss_pred             CCCcEEEeCCCChhHHHHHHHhccEEEEcCCCccccHHHHHHHHhCCcEEEeCCCC----ccccccCCceEEe-CC---C
Q 027511           28 LQDRVEMLGAVPHAQVRSVLISGHIFLNSSLTEAFCIAILEAASCGLLTVSTRVGG----VPEVLPDDMVVLA-EP---D   99 (222)
Q Consensus        28 l~~~V~~~g~v~~~~~~~ll~~adv~v~~s~~E~~g~~ilEAma~G~PvVa~~~gg----~~e~i~~~~~g~~-~~---~   99 (222)
                      ++++|.+.+++|+.   .++..+|++|    +.+...++.||+++|+|+|+....+    ..+.+.+.+.|.. ..   +
T Consensus       284 ~~~~v~~~~~~p~~---~ll~~~~~~I----~hgG~~t~~Eal~~GvP~l~~P~~~DQ~~na~~v~~~G~g~~l~~~~~~  356 (401)
T d1rrva_         284 DRDDCFAIDEVNFQ---ALFRRVAAVI----HHGSAGTEHVATRAGVPQLVIPRNTDQPYFAGRVAALGIGVAHDGPTPT  356 (401)
T ss_dssp             CCTTEEEESSCCHH---HHGGGSSEEE----ECCCHHHHHHHHHHTCCEEECCCSBTHHHHHHHHHHHTSEEECSSSCCC
T ss_pred             CCCCEEEEeccCcH---HHhhhccEEE----ecCCchHHHHHHHhCCCEEEecccccHHHHHHHHHHCCCEEEcCcCCCC
Confidence            46789999999754   5678899999    5777789999999999999877654    3344444444532 22   6


Q ss_pred             HHHHHHHHHHHHhcCCCCCHHHHHHHHHhcCCHHHHHHHHHHHHHHH
Q 027511          100 PGDMVLAIRKAISLLPKIDPQVMHERMKKLYNWHDVAKRTEIVYDRA  146 (222)
Q Consensus       100 ~~~la~~i~~ll~~~~~~~~~~~~~~~~~~fs~~~~~~~~~~~~~~~  146 (222)
                      +++++++|.+++++ +   ..+..+++++...- .-+.+..+++++.
T Consensus       357 ~~~L~~ai~~vl~~-~---~r~~a~~~~~~~~~-~g~~~aa~~ie~~  398 (401)
T d1rrva_         357 FESLSAALTTVLAP-E---TRARAEAVAGMVLT-DGAAAAADLVLAA  398 (401)
T ss_dssp             HHHHHHHHHHHTSH-H---HHHHHHHHTTTCCC-CHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHhCH-H---HHHHHHHHHHHHhh-cCHHHHHHHHHHH
Confidence            89999999999954 2   22333344444432 2334444444444

>d1iira_ c.87.1.5 (A:) UDP-glucosyltransferase GtfB {Amycolatopsis orientalis [TaxId: 31958]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Gtf glycosyltransferase
domain: UDP-glucosyltransferase GtfB
species: Amycolatopsis orientalis [TaxId: 31958]

Probab=97.98  E-value=9.3e-06  Score=66.18  Aligned_cols=78  Identities=13%  Similarity=0.017  Sum_probs=58.8

Q ss_pred             CCcEEEeCCCChhHHHHHHHhccEEEEcCCCccccHHHHHHHHhCCcEEEeCCCC----ccccccCCceEEe-CC---CH
Q 027511           29 QDRVEMLGAVPHAQVRSVLISGHIFLNSSLTEAFCIAILEAASCGLLTVSTRVGG----VPEVLPDDMVVLA-EP---DP  100 (222)
Q Consensus        29 ~~~V~~~g~v~~~~~~~ll~~adv~v~~s~~E~~g~~ilEAma~G~PvVa~~~gg----~~e~i~~~~~g~~-~~---~~  100 (222)
                      ++||.+.+++++.   .+|..+|++|    +.+...++.||+++|+|+|.....+    ....+.+.+.|.. ..   ++
T Consensus       284 ~~nv~~~~~~p~~---~~l~~~~~~V----~hgG~~t~~Eal~~GvP~v~~P~~~DQ~~na~~l~~~G~g~~l~~~~~~~  356 (401)
T d1iira_         284 GADCFAIGEVNHQ---VLFGRVAAVI----HHGGAGTTHVAARAGAPQILLPQMADQPYYAGRVAELGVGVAHDGPIPTF  356 (401)
T ss_dssp             GGGEEECSSCCHH---HHGGGSSEEE----ECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHHTSEEECSSSSCCH
T ss_pred             CCCEEEEeccCHH---HHHhhcCEEE----ecCCchHHHHHHHhCCCEEEccccccHHHHHHHHHHCCCEEEcCcCCCCH
Confidence            4579999999754   5688899999    5677899999999999999865543    3334444444433 22   68


Q ss_pred             HHHHHHHHHHHhc
Q 027511          101 GDMVLAIRKAISL  113 (222)
Q Consensus       101 ~~la~~i~~ll~~  113 (222)
                      ++++++|.+++++
T Consensus       357 ~~l~~ai~~~l~~  369 (401)
T d1iira_         357 DSLSAALATALTP  369 (401)
T ss_dssp             HHHHHHHHHHTSH
T ss_pred             HHHHHHHHHHhCH
Confidence            9999999999964

>d1v4va_ c.87.1.3 (A:) UDP-N-acetylglucosamine 2-epimerase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: UDP-N-acetylglucosamine 2-epimerase
domain: UDP-N-acetylglucosamine 2-epimerase
species: Thermus thermophilus [TaxId: 274]

Probab=97.45  E-value=0.0005  Score=56.66  Aligned_cols=118  Identities=14%  Similarity=0.070  Sum_probs=85.8

Q ss_pred             HHcCCCCcEEEeCCCChhHHHHHHHhccEEEEcCCCccccHHHHHHHHhCCcEEEe-CCCCccccccCCceEEeCCCHHH
Q 027511           24 EKHSLQDRVEMLGAVPHAQVRSVLISGHIFLNSSLTEAFCIAILEAASCGLLTVST-RVGGVPEVLPDDMVVLAEPDPGD  102 (222)
Q Consensus        24 ~~~~l~~~V~~~g~v~~~~~~~ll~~adv~v~~s~~E~~g~~ilEAma~G~PvVa~-~~gg~~e~i~~~~~g~~~~~~~~  102 (222)
                      +......++.++..++..++..+++.|++++--     .|..+.||.++|+|+|.- +.|.-.+-+..+.+.++..|+++
T Consensus       246 ~~~~~~~n~~~~~~l~~~~~l~ll~~s~~vign-----Sssgi~Ea~~lg~P~Inir~~~eRqeg~~~g~nvlv~~d~~~  320 (373)
T d1v4va_         246 PVLKGVRNFVLLDPLEYGSMAALMRASLLLVTD-----SGGLQEEGAALGVPVVVLRNVTERPEGLKAGILKLAGTDPEG  320 (373)
T ss_dssp             HHHTTCTTEEEECCCCHHHHHHHHHTEEEEEES-----CHHHHHHHHHTTCCEEECSSSCSCHHHHHHTSEEECCSCHHH
T ss_pred             hhhcccccceeeccchHHHHHHHhhhceeEecc-----cchhhhcchhhcCcEEEeCCCccCHHHHhcCeeEEcCCCHHH
Confidence            344555689999999999999999999998732     355778999999999987 55777777778878777779999


Q ss_pred             HHHHHHHHHhcCCCCCHHHHHHHHHhcCCHHHHHHHHHHHHHHHhcC
Q 027511          103 MVLAIRKAISLLPKIDPQVMHERMKKLYNWHDVAKRTEIVYDRALEC  149 (222)
Q Consensus       103 la~~i~~ll~~~~~~~~~~~~~~~~~~fs~~~~~~~~~~~~~~~~~~  149 (222)
                      +.+++..+++++.   ..........-|.--..+++..+.+.+-+..
T Consensus       321 I~~~i~~~l~~~~---~~~~~~~~~npYGdG~as~rI~~~L~~~~~~  364 (373)
T d1v4va_         321 VYRVVKGLLENPE---ELSRMRKAKNPYGDGKAGLMVARGVAWRLGL  364 (373)
T ss_dssp             HHHHHHHHHTCHH---HHHHHHHSCCSSCCSCHHHHHHHHHHHHTTS
T ss_pred             HHHHHHHHHcCHH---HHhhcccCCCCCCCCHHHHHHHHHHHHHhCC
Confidence            9999999987632   1111112223355555666666666666543

>d1f0ka_ c.87.1.2 (A:) Peptidoglycan biosynthesis glycosyltransferase MurG {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Peptidoglycan biosynthesis glycosyltransferase MurG
domain: Peptidoglycan biosynthesis glycosyltransferase MurG
species: Escherichia coli [TaxId: 562]

Probab=97.40  E-value=0.00018  Score=57.60  Aligned_cols=77  Identities=8%  Similarity=-0.004  Sum_probs=52.2

Q ss_pred             CCCcEEEeCCCChhHHHHHHHhccEEEEcCCCccccHHHHHHHHhCCcEEEeCCCC-------ccccccCCceEEeCC--
Q 027511           28 LQDRVEMLGAVPHAQVRSVLISGHIFLNSSLTEAFCIAILEAASCGLLTVSTRVGG-------VPEVLPDDMVVLAEP--   98 (222)
Q Consensus        28 l~~~V~~~g~v~~~~~~~ll~~adv~v~~s~~E~~g~~ilEAma~G~PvVa~~~gg-------~~e~i~~~~~g~~~~--   98 (222)
                      ...++..+++.  +++..+|+.||++|    +-+-+.++.|++++|+|+|.-....       ..+.+.+.+.++..+  
T Consensus       229 ~~~~~~v~~f~--~~~~~lm~~adl~I----t~~G~~T~~Eal~~g~P~I~iP~~~~~~~Q~~NA~~l~~~G~~~~~~~~  302 (351)
T d1f0ka_         229 GQPQHKVTEFI--DDMAAAYAWADVVV----CRSGALTVSEIAAAGLPALFVPFQHKDRQQYWNALPLEKAGAAKIIEQP  302 (351)
T ss_dssp             TCTTSEEESCC--SCHHHHHHHCSEEE----ECCCHHHHHHHHHHTCCEEECCCCCTTCHHHHHHHHHHHTTSEEECCGG
T ss_pred             ccccceeeeeh--hhHHHHHHhCchhh----ccccchHHHHHHHhCCceeeeecccCCchHHHHHHHHHHCCCEEEechh
Confidence            34567788885  67889999999998    4455689999999999999754321       123344444454433  


Q ss_pred             --CHHHHHHHHHHH
Q 027511           99 --DPGDMVLAIRKA  110 (222)
Q Consensus        99 --~~~~la~~i~~l  110 (222)
                        +++.+.++|..+
T Consensus       303 ~~~~e~l~~~l~~l  316 (351)
T d1f0ka_         303 QLSVDAVANTLAGW  316 (351)
T ss_dssp             GCCHHHHHHHHHTC
T ss_pred             hCCHHHHHHHHHhh
Confidence              456666666554

>d1o6ca_ c.87.1.3 (A:) UDP-N-acetylglucosamine 2-epimerase {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: UDP-N-acetylglucosamine 2-epimerase
domain: UDP-N-acetylglucosamine 2-epimerase
species: Bacillus subtilis [TaxId: 1423]

Probab=97.03  E-value=0.0028  Score=52.11  Aligned_cols=84  Identities=19%  Similarity=0.196  Sum_probs=65.2

Q ss_pred             HcCCCCcEEEeCCCChhHHHHHHHhccEEEEcCCCccccHHHHHHHHhCCcEEEeCC-CCccccccCCceEEeCCCHHHH
Q 027511           25 KHSLQDRVEMLGAVPHAQVRSVLISGHIFLNSSLTEAFCIAILEAASCGLLTVSTRV-GGVPEVLPDDMVVLAEPDPGDM  103 (222)
Q Consensus        25 ~~~l~~~V~~~g~v~~~~~~~ll~~adv~v~~s~~E~~g~~ilEAma~G~PvVa~~~-gg~~e~i~~~~~g~~~~~~~~l  103 (222)
                      .+...++|.++..++..++..+++.|++++    +...| .+.||.++|+|+|.-.. +.-++.+..+.+.++..|.+++
T Consensus       251 ~~~~~~ni~~~~~l~~~~fl~llk~s~~vI----gnSss-~i~Ea~~lg~P~Inir~~tERqe~~~~g~nilv~~~~~~I  325 (377)
T d1o6ca_         251 HFGDSDRVHLIEPLEVIDFHNFAAKSHFIL----TDSGG-VQEEAPSLGKPVLVLRDTTERPEGVEAGTLKLAGTDEENI  325 (377)
T ss_dssp             C--CCSSEEECCCCCHHHHHHHHHHCSEEE----EC--C-HHHHGGGGTCCEEEECSCCC---CTTTTSSEEECSCHHHH
T ss_pred             ccccccceEeccccchHHHHHHHhhhheee----cccch-hHHhhhhhhceEEEeCCCCcCcchhhcCeeEECCCCHHHH
Confidence            345567899999999999999999999988    33333 57799999999997644 5566777778777888899999


Q ss_pred             HHHHHHHHhc
Q 027511          104 VLAIRKAISL  113 (222)
Q Consensus       104 a~~i~~ll~~  113 (222)
                      .+++.+++.+
T Consensus       326 ~~~i~~~l~~  335 (377)
T d1o6ca_         326 YQLAKQLLTD  335 (377)
T ss_dssp             HHHHHHHHHC
T ss_pred             HHHHHHHHhC
Confidence            9999999876

>d2pq6a1 c.87.1.10 (A:8-480) (Iso)flavonoid glycosyltransferase {Medicago truncatula [TaxId: 3880]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: UDPGT-like
domain: (Iso)flavonoid glycosyltransferase
species: Medicago truncatula [TaxId: 3880]

Probab=96.77  E-value=0.0017  Score=53.37  Aligned_cols=79  Identities=16%  Similarity=0.042  Sum_probs=57.3

Q ss_pred             CcEEEeCCCChhHHHHHH--HhccEEEEcCCCccccHHHHHHHHhCCcEEEeCCCC----ccccc-cCCceEEeCC---C
Q 027511           30 DRVEMLGAVPHAQVRSVL--ISGHIFLNSSLTEAFCIAILEAASCGLLTVSTRVGG----VPEVL-PDDMVVLAEP---D   99 (222)
Q Consensus        30 ~~V~~~g~v~~~~~~~ll--~~adv~v~~s~~E~~g~~ilEAma~G~PvVa~~~gg----~~e~i-~~~~~g~~~~---~   99 (222)
                      +||.+..++|+.+   +|  .++++||    +-+-..++.||+.+|+|.|+....+    ...-+ ...+.|+..+   +
T Consensus       346 ~Nv~~~~~~Pq~~---lL~hp~~~~fI----tHGG~~s~~Eal~~GVP~lv~P~~~DQ~~na~rv~~~~G~G~~l~~~~t  418 (473)
T d2pq6a1         346 DRGLIASWCPQDK---VLNHPSIGGFL----THCGWNSTTESICAGVPMLCWPFFADQPTDCRFICNEWEIGMEIDTNVK  418 (473)
T ss_dssp             TTEEEESCCCHHH---HHTSTTEEEEE----ECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHTSCCEEECCSSCC
T ss_pred             CceEEeeeCCHHH---HhcCCcCcEEE----ecCCccHHHHHHHcCCCEEeccchhhhHHHHHHHHHHcCeEEeeCCCcC
Confidence            5788888888665   46  5778888    6666789999999999999876532    22333 4424444322   7


Q ss_pred             HHHHHHHHHHHHhcCC
Q 027511          100 PGDMVLAIRKAISLLP  115 (222)
Q Consensus       100 ~~~la~~i~~ll~~~~  115 (222)
                      .++++++|.+++++++
T Consensus       419 ~~~l~~ai~~vl~d~~  434 (473)
T d2pq6a1         419 REELAKLINEVIAGDK  434 (473)
T ss_dssp             HHHHHHHHHHHHTSHH
T ss_pred             HHHHHHHHHHHHcCCh
Confidence            8999999999999853

>d2vcha1 c.87.1.10 (A:6-476) Hydroquinone glucosyltransferase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: UDPGT-like
domain: Hydroquinone glucosyltransferase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=96.52  E-value=0.0026  Score=52.32  Aligned_cols=80  Identities=19%  Similarity=0.095  Sum_probs=57.6

Q ss_pred             CCcEEEeCCCChhHHHHHH--HhccEEEEcCCCccccHHHHHHHHhCCcEEEeCCCC----ccccc-cCCceEEeC----
Q 027511           29 QDRVEMLGAVPHAQVRSVL--ISGHIFLNSSLTEAFCIAILEAASCGLLTVSTRVGG----VPEVL-PDDMVVLAE----   97 (222)
Q Consensus        29 ~~~V~~~g~v~~~~~~~ll--~~adv~v~~s~~E~~g~~ilEAma~G~PvVa~~~gg----~~e~i-~~~~~g~~~----   97 (222)
                      ++||.+.+|+|+.+   +|  .++++||    +-+-..++.||+.+|+|.|+....+    ....+ +.-+.|+..    
T Consensus       333 ~~nv~~~~w~Pq~~---lL~hp~~~~fV----tHGG~gS~~EAl~~GvP~v~~P~~~DQ~~nA~rv~e~lG~Gv~l~~~~  405 (471)
T d2vcha1         333 KRGFVIPFWAPQAQ---VLAHPSTGGFL----THCGWNSTLESVVSGIPLIAWPLYAEQKMNAVLLSEDIRAALRPRAGD  405 (471)
T ss_dssp             TTEEEEESCCCHHH---HHHSTTEEEEE----ECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHTTCCEECCCCCT
T ss_pred             CCCeeecccCCHHH---HhcCccCCEEE----ecCCccHHHHHHHcCCCEEEcccccccHHHHHHHHHHheeEEEEecCC
Confidence            46899999999875   55  4678888    6666779999999999999866532    22223 332334322    


Q ss_pred             ---CCHHHHHHHHHHHHhcCC
Q 027511           98 ---PDPGDMVLAIRKAISLLP  115 (222)
Q Consensus        98 ---~~~~~la~~i~~ll~~~~  115 (222)
                         -+.+++.++|.+++++++
T Consensus       406 ~~~~t~~~l~~ai~~vl~~~~  426 (471)
T d2vcha1         406 DGLVRREEVARVVKGLMEGEE  426 (471)
T ss_dssp             TSCCCHHHHHHHHHHHHTSTH
T ss_pred             CCcCCHHHHHHHHHHHhCCcH
Confidence               267999999999998863

>d2acva1 c.87.1.10 (A:3-463) Triterpene UDP-glucosyl transferase UGT71G1 {Medicago truncatula [TaxId: 3880]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: UDPGT-like
domain: Triterpene UDP-glucosyl transferase UGT71G1
species: Medicago truncatula [TaxId: 3880]

Probab=96.24  E-value=0.0013  Score=53.98  Aligned_cols=79  Identities=14%  Similarity=0.051  Sum_probs=53.5

Q ss_pred             CcEEEeCCCChhHHHHHHHhccEEEEcCCCccccHHHHHHHHhCCcEEEeCCCC----ccccc-cCCceEEeC-------
Q 027511           30 DRVEMLGAVPHAQVRSVLISGHIFLNSSLTEAFCIAILEAASCGLLTVSTRVGG----VPEVL-PDDMVVLAE-------   97 (222)
Q Consensus        30 ~~V~~~g~v~~~~~~~ll~~adv~v~~s~~E~~g~~ilEAma~G~PvVa~~~gg----~~e~i-~~~~~g~~~-------   97 (222)
                      +++.+..+.++.++. ++.++++||    +-+-..++.||+.+|+|.|+....+    ...-+ ...+.|+.-       
T Consensus       330 ~n~~v~~~~pq~~~l-~~p~~~~fI----tHGG~gs~~eAl~~GVP~l~~P~~~DQ~~nA~rlve~~G~G~~l~~~~~~~  404 (461)
T d2acva1         330 GKGMICGWAPQVEVL-AHKAIGGFV----SHCGWNSILESMWFGVPILTWPIYAEQQLNAFRLVKEWGVGLGLRVDYRKG  404 (461)
T ss_dssp             CSEEEESSCCHHHHH-HSTTEEEEE----ECCCHHHHHHHHHTTCCEEECCCSTTHHHHHHHHHHTSCCEEESCSSCCTT
T ss_pred             CCeEEEecCCHHHHH-hcccCCEEE----ecCCccHHHHHHHcCCCEEeCCcccchHHHHHHHHHHhCceEEeecccccc
Confidence            345566666554433 457788888    6666789999999999999866532    22333 443444322       


Q ss_pred             ---CCHHHHHHHHHHHHhc
Q 027511           98 ---PDPGDMVLAIRKAISL  113 (222)
Q Consensus        98 ---~~~~~la~~i~~ll~~  113 (222)
                         .+.++++++|.+++++
T Consensus       405 ~~~~t~~~l~~a~~~vl~~  423 (461)
T d2acva1         405 SDVVAAEEIEKGLKDLMDK  423 (461)
T ss_dssp             CCCCCHHHHHHHHHHHTCT
T ss_pred             CCccCHHHHHHHHHHHhhC
Confidence               3679999999999965

>d1f6da_ c.87.1.3 (A:) UDP-N-acetylglucosamine 2-epimerase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: UDP-N-acetylglucosamine 2-epimerase
domain: UDP-N-acetylglucosamine 2-epimerase
species: Escherichia coli [TaxId: 562]

Probab=96.00  E-value=0.011  Score=48.32  Aligned_cols=111  Identities=15%  Similarity=0.077  Sum_probs=77.4

Q ss_pred             cCCCCcEEEeCCCChhHHHHHHHhccEEEEcCCCccccHHHHHHHHhCCcEEEeC-CCCccccccCCceEEeCCCHHHHH
Q 027511           26 HSLQDRVEMLGAVPHAQVRSVLISGHIFLNSSLTEAFCIAILEAASCGLLTVSTR-VGGVPEVLPDDMVVLAEPDPGDMV  104 (222)
Q Consensus        26 ~~l~~~V~~~g~v~~~~~~~ll~~adv~v~~s~~E~~g~~ilEAma~G~PvVa~~-~gg~~e~i~~~~~g~~~~~~~~la  104 (222)
                      +...+++.+...+++.++..+++.|++++-=|     |..+.||-+.|+|+|.-. .+.-++.+..+.+.++.+|.+++.
T Consensus       259 ~~~~~ni~~~~~l~~~~fl~ll~~a~~vignS-----ssgi~Ea~~lg~P~Inir~~ter~~~~~~g~~i~v~~~~~~I~  333 (376)
T d1f6da_         259 LGHVKNVILIDPQEYLPFVWLMNHAWLILTDS-----GGIQEEAPSLGKPVLVMRDTTERPEAVTAGTVRLVGTDKQRIV  333 (376)
T ss_dssp             HTTCTTEEEECCCCHHHHHHHHHHCSEEEESS-----SGGGGTGGGGTCCEEECSSCCSCHHHHHHTSEEECCSSHHHHH
T ss_pred             hcccccceeeccccHHHHHHHHhhceEEEecC-----cchHhhHHHhCCCEEEcCCCccCccceecCeeEECCCCHHHHH
Confidence            44557899999999999999999999998433     345679999999999653 344667777777777778999999


Q ss_pred             HHHHHHHhcCCCCCHHHHHHHHHhcCCHHHHHHHHHHHHH
Q 027511          105 LAIRKAISLLPKIDPQVMHERMKKLYNWHDVAKRTEIVYD  144 (222)
Q Consensus       105 ~~i~~ll~~~~~~~~~~~~~~~~~~fs~~~~~~~~~~~~~  144 (222)
                      +++.++++++.   ..+.......-|.--..+++..++++
T Consensus       334 ~ai~~~l~~~~---~~~~~~~~~npYGdG~as~rI~~iLk  370 (376)
T d1f6da_         334 EEVTRLLKDEN---EYQAMSRAHNPYGDGQACSRILEALK  370 (376)
T ss_dssp             HHHHHHHHCHH---HHHHHHHSCCTTCCSCHHHHHHHHHH
T ss_pred             HHHHHHHhChH---hhhhhccCCCCCCCChHHHHHHHHHH
Confidence            99999997631   11111122222443445555555554

>d2c1xa1 c.87.1.10 (A:7-456) UDP glucose:flavonoid 3-o-glucosyltransferase {Grape (Vitis vinifera) [TaxId: 29760]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: UDPGT-like
domain: UDP glucose:flavonoid 3-o-glucosyltransferase
species: Grape (Vitis vinifera) [TaxId: 29760]

Probab=95.67  E-value=0.0054  Score=50.25  Aligned_cols=79  Identities=13%  Similarity=0.068  Sum_probs=56.3

Q ss_pred             CcEEEeCCCChhHHHHHH--HhccEEEEcCCCccccHHHHHHHHhCCcEEEeCCCC----ccccc-cCCceEEeCC----
Q 027511           30 DRVEMLGAVPHAQVRSVL--ISGHIFLNSSLTEAFCIAILEAASCGLLTVSTRVGG----VPEVL-PDDMVVLAEP----   98 (222)
Q Consensus        30 ~~V~~~g~v~~~~~~~ll--~~adv~v~~s~~E~~g~~ilEAma~G~PvVa~~~gg----~~e~i-~~~~~g~~~~----   98 (222)
                      ++|.+..++|+.+   +|  .++++||    +-+-..++.||+.+|+|+|+....+    ...-+ ...+.|...+    
T Consensus       319 ~nv~~~~~~pq~~---lL~hp~~~~fI----tHGG~~s~~eal~~GvP~v~~P~~~DQ~~na~rv~~~~G~G~~l~~~~~  391 (450)
T d2c1xa1         319 GYGMVVPWAPQAE---VLAHEAVGAFV----THCGWNSLWESVAGGVPLICRPFFGDQRLNGRMVEDVLEIGVRIEGGVF  391 (450)
T ss_dssp             TTEEEESCCCHHH---HHTSTTEEEEE----ECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHTSCCEEECGGGSC
T ss_pred             ccccccccCChHh---hhccCceeEEE----ccCCccHHHHHHHcCCCEEecccccchHHHHHHHHHHcCcEEEecCCCc
Confidence            4677788877654   44  5678787    5666789999999999999876643    22234 3434444222    


Q ss_pred             CHHHHHHHHHHHHhcCC
Q 027511           99 DPGDMVLAIRKAISLLP  115 (222)
Q Consensus        99 ~~~~la~~i~~ll~~~~  115 (222)
                      +.+++.++|.++++++.
T Consensus       392 t~~~l~~ai~~vL~d~~  408 (450)
T d2c1xa1         392 TKSGLMSCFDQILSQEK  408 (450)
T ss_dssp             CHHHHHHHHHHHHHSHH
T ss_pred             CHHHHHHHHHHHhcCcH
Confidence            78999999999999853

>d1l5wa_ c.87.1.4 (A:) Maltodextrin phosphorylase (MALP) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Oligosaccharide phosphorylase
domain: Maltodextrin phosphorylase (MALP)
species: Escherichia coli [TaxId: 562]

Probab=95.20  E-value=0.027  Score=50.24  Aligned_cols=68  Identities=21%  Similarity=0.120  Sum_probs=60.5

Q ss_pred             cEEEeCCCChhHHHHHHHhccEEEEcCC--CccccHHHHHHHHhCCcEEEeCCCCccccccC--CceEEeCC
Q 027511           31 RVEMLGAVPHAQVRSVLISGHIFLNSSL--TEAFCIAILEAASCGLLTVSTRVGGVPEVLPD--DMVVLAEP   98 (222)
Q Consensus        31 ~V~~~g~v~~~~~~~ll~~adv~v~~s~--~E~~g~~ilEAma~G~PvVa~~~gg~~e~i~~--~~~g~~~~   98 (222)
                      +|.|+....-+-...++..+||.+++|.  .|+.|++-+=||.-|.+.+++--|...|+..+  +.++|..+
T Consensus       606 kVVFlenYdv~lA~~lv~g~DVwln~p~~p~EASGTSgMKaalNG~lnlstlDGw~vE~~~~vg~eN~f~fG  677 (796)
T d1l5wa_         606 KVVFLPDYCVSAAEKLIPAADISEQISTAGKEASGTGNMKLALNGALTVGTLDGANVEIAEKVGEENIFIFG  677 (796)
T ss_dssp             EEEECSSCCHHHHHHHGGGCSEEEECCCTTTCCCCSHHHHHHHTTCEEEECSCTTHHHHHHHHCGGGSEECS
T ss_pred             eEEEeCCCchHHHHHHhcccchhhhCCCCCcccCCchHHHHHHcCCeeeecccchHHHHHHhcCccceEEec
Confidence            7999999888888889999999999988  89999999999999999999999999998864  56667665

>d2gj4a1 c.87.1.4 (A:12-835) Glycogen phosphorylase {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Oligosaccharide phosphorylase
domain: Glycogen phosphorylase
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=94.93  E-value=0.039  Score=49.33  Aligned_cols=68  Identities=21%  Similarity=0.117  Sum_probs=60.1

Q ss_pred             cEEEeCCCChhHHHHHHHhccEEEEcCC--CccccHHHHHHHHhCCcEEEeCCCCccccccC--CceEEeCC
Q 027511           31 RVEMLGAVPHAQVRSVLISGHIFLNSSL--TEAFCIAILEAASCGLLTVSTRVGGVPEVLPD--DMVVLAEP   98 (222)
Q Consensus        31 ~V~~~g~v~~~~~~~ll~~adv~v~~s~--~E~~g~~ilEAma~G~PvVa~~~gg~~e~i~~--~~~g~~~~   98 (222)
                      +|.|+....-+--..++.++||..+.|.  .|+.|+.=+=+|.-|.+.+++--|...|+..+  +.++|..+
T Consensus       630 kVvFlenY~v~lA~~li~g~Dvwln~p~~~~EASGTSgMK~alNGal~lstlDGwnvEi~~~vg~~N~~~fG  701 (824)
T d2gj4a1         630 RVIFLENYRVSLAEKVIPAADLSEQISTAGTEASGTGNMKFMLNGALTIGTMDGANVEMAEEAGEENFFIFG  701 (824)
T ss_dssp             EEEEETTCCHHHHHHHGGGCSEEEECCCTTSCSCCSHHHHHHHTTCEEEECSCTTHHHHHHHHCGGGSEECS
T ss_pred             eEEEcCCCchHHHHHhhhhhhhhhcCCCCCcccCCcchhHHHHcCCeeeccccchHHHHHHhcCcccEEEeC
Confidence            6999999988888889999999999988  89999999999999999999999999998764  45566655

>d1pswa_ c.87.1.7 (A:) ADP-heptose LPS heptosyltransferase II {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: ADP-heptose LPS heptosyltransferase II
domain: ADP-heptose LPS heptosyltransferase II
species: Escherichia coli [TaxId: 562]

Probab=94.40  E-value=0.18  Score=39.53  Aligned_cols=72  Identities=10%  Similarity=-0.010  Sum_probs=50.2

Q ss_pred             ceEEEEEcCCccHHHHHHHHHHcCC---CCcEEEeCCCChhHHHHHHHhccEEEEcCCCccccHHHHHHHHhCCcEEEeC
Q 027511            4 KVRFIVGGDGPKRVRLEEMREKHSL---QDRVEMLGAVPHAQVRSVLISGHIFLNSSLTEAFCIAILEAASCGLLTVSTR   80 (222)
Q Consensus         4 ~~~lvi~G~g~~~~~l~~~~~~~~l---~~~V~~~g~v~~~~~~~ll~~adv~v~~s~~E~~g~~ilEAma~G~PvVa~~   80 (222)
                      +.++++.|...+.+..+++.+....   ..-+.+.|..+-.++..++++||++|.+..     ..+--|.++|+|+|+--
T Consensus       213 ~~~ivl~g~~~e~~~~~~~~~~~~~~~~~~~~~l~g~~sl~el~~li~~a~l~I~~Dt-----g~~HlAaa~g~p~i~lf  287 (348)
T d1pswa_         213 GYQVVLFGSAKDHEAGNEILAALNTEQQAWCRNLAGETQLDQAVILIAACKAIVTNDS-----GLMHVAAALNRPLVALY  287 (348)
T ss_dssp             TCEEEECCCGGGHHHHHHHHTTSCHHHHTTEEECTTTSCHHHHHHHHHTSSEEEEESS-----HHHHHHHHTTCCEEEEE
T ss_pred             CCccccccccchHHHHHHHHHhhhcccccccccccCCccHHHHHHHHhcceeEeecCc-----cHHHHHHHcCCCEEEEE
Confidence            4567777766555555554433211   223445678888999999999999997654     35678999999999754

>d1yl7a1 c.2.1.3 (A:2-105,A:215-245) Dihydrodipicolinate reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=89.49  E-value=0.47  Score=32.50  Aligned_cols=77  Identities=10%  Similarity=0.079  Sum_probs=55.9

Q ss_pred             EEEEEc-CCccHHHHHHHHHHcCCCCcEEEeCCCChhH-HHHHH-HhccEEEEcCCCccccHHHHHHHHhCCcEEEeCCC
Q 027511            6 RFIVGG-DGPKRVRLEEMREKHSLQDRVEMLGAVPHAQ-VRSVL-ISGHIFLNSSLTEAFCIAILEAASCGLLTVSTRVG   82 (222)
Q Consensus         6 ~lvi~G-~g~~~~~l~~~~~~~~l~~~V~~~g~v~~~~-~~~ll-~~adv~v~~s~~E~~g~~ilEAma~G~PvVa~~~g   82 (222)
                      |+.|.| .|.+-..+.+.+.+.   +.+.+.+.++..+ +..+. ..+|++|-=|..++.--.+-.+...|+|+|....|
T Consensus         1 kI~v~Ga~GrMG~~i~~~i~~~---~~~~l~~~~d~~~~~~~~~~~~~DvvIDFS~p~~~~~~~~~~~~~~~~~ViGTTG   77 (135)
T d1yl7a1           1 RVGVLGAKGKVGATMVRAVAAA---DDLTLSAELDAGDPLSLLTDGNTEVVIDFTHPDVVMGNLEFLIDNGIHAVVGTTG   77 (135)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHS---TTSEEEEEECTTCCTHHHHTTTCSEEEECCCTTTHHHHHHHHHHTTCEEEECCCC
T ss_pred             CEEEECCCCHHHHHHHHHHHhC---CCCEEEEEEecCCchhhhccccCCEEEEcccHHHHHHHHHHHHhcCCCEEEeccc
Confidence            578889 788888888777654   2355555554333 23332 46899999999999888888999999999987666


Q ss_pred             Ccc
Q 027511           83 GVP   85 (222)
Q Consensus        83 g~~   85 (222)
                      -..
T Consensus        78 ~~~   80 (135)
T d1yl7a1          78 FTA   80 (135)
T ss_dssp             CCH
T ss_pred             cch
Confidence            543

>d1kjqa2 c.30.1.1 (A:2-112) Glycinamide ribonucleotide transformylase PurT, N-domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Glycinamide ribonucleotide transformylase PurT, N-domain
species: Escherichia coli [TaxId: 562]

Probab=89.17  E-value=0.91  Score=29.80  Aligned_cols=73  Identities=15%  Similarity=0.092  Sum_probs=50.1

Q ss_pred             eEEEEEcCCccHHHHHHHHHHcCCCC---------------cEEEeCCC-ChhHHHHHHHhccEEEEcCCCccccHHHHH
Q 027511            5 VRFIVGGDGPKRVRLEEMREKHSLQD---------------RVEMLGAV-PHAQVRSVLISGHIFLNSSLTEAFCIAILE   68 (222)
Q Consensus         5 ~~lvi~G~g~~~~~l~~~~~~~~l~~---------------~V~~~g~v-~~~~~~~ll~~adv~v~~s~~E~~g~~ilE   68 (222)
                      .++-|+|+|.....+...+.++|+.-               ...+.|.. +.+.+..+..++.+=+.+..+|.-+...++
T Consensus        12 ~kigIlGgGQL~rMla~aA~~lG~~v~v~d~~~~~PA~~va~~~i~~~~~d~~~l~~~~~~~~~DviT~E~EnI~~~~L~   91 (111)
T d1kjqa2          12 TRVMLLGSGELGKEVAIECQRLGVEVIAVDRYADAPAMHVAHRSHVINMLDGDALRRVVELEKPHYIVPEIEAIATDMLI   91 (111)
T ss_dssp             CEEEEESCSHHHHHHHHHHHTTTCEEEEEESSTTCGGGGGSSEEEECCTTCHHHHHHHHHHHCCSEEEECSSCSCHHHHH
T ss_pred             CEEEEEeCCHHHHHHHHHHHHCCCEEEEEcCCCCCchhhcCCeEEECCCCCHHHHHHHHHhhCCceEEEEecCcCHHHHH
Confidence            57999999988888888888888631               13344544 445556666554333336789999999999


Q ss_pred             HH-HhCCcEE
Q 027511           69 AA-SCGLLTV   77 (222)
Q Consensus        69 Am-a~G~PvV   77 (222)
                      .+ .-|+||+
T Consensus        92 ~le~~g~~v~  101 (111)
T d1kjqa2          92 QLEEEGLNVV  101 (111)
T ss_dssp             HHHHTTCEES
T ss_pred             HHHHCCCeEC
Confidence            88 4567765

>d2ez9a1 c.31.1.3 (A:183-365) Pyruvate oxidase {Lactobacillus plantarum [TaxId: 1590]}

class: Alpha and beta proteins (a/b)
fold: DHS-like NAD/FAD-binding domain
superfamily: DHS-like NAD/FAD-binding domain
family: Pyruvate oxidase and decarboxylase, middle domain
domain: Pyruvate oxidase
species: Lactobacillus plantarum [TaxId: 1590]

Probab=86.48  E-value=1.9  Score=30.63  Aligned_cols=104  Identities=14%  Similarity=0.095  Sum_probs=56.2

Q ss_pred             EEEEcCCcc--HHHHHHHHHHcCCCC-------------cEEEeC---CCChhHHHHHHHhccEEEEcC-CCccccHHHH
Q 027511            7 FIVGGDGPK--RVRLEEMREKHSLQD-------------RVEMLG---AVPHAQVRSVLISGHIFLNSS-LTEAFCIAIL   67 (222)
Q Consensus         7 lvi~G~g~~--~~~l~~~~~~~~l~~-------------~V~~~g---~v~~~~~~~ll~~adv~v~~s-~~E~~g~~il   67 (222)
                      ++|+|.|-.  .+++.+++++++.+-             +-.++|   .........++..||+++.-. ....+..  -
T Consensus        34 vii~G~G~~~a~~~l~~lae~~~~Pv~tt~~~~g~~~~~hp~~~G~~G~~~~~~~~~~i~~aDlil~vG~~l~~~~~--~  111 (183)
T d2ez9a1          34 LIYYGIGARKAGKELEQLSKTLKIPLMSTYPAKGIVADRYPAYLGSANRVAQKPANEALAQADVVLFVGNNYPFAEV--S  111 (183)
T ss_dssp             EEEECGGGTTCHHHHHHHHHHHTCCEEECGGGTTSSCTTCTTBCCCCSSSSCHHHHHHHHHCSEEEEESCCCTTTTT--T
T ss_pred             EEEEcCCcccchHHHHHHhhccceEEEeeccccccccccCccccccccccccHHHHhhhhccCceEEeecccCcccc--e
Confidence            678886643  378999999998741             111333   334677889999999987532 2111110  1


Q ss_pred             HHHHhCCcEEEeCCCCccccccCCc-eEEeCCCHHHHHHHHHHHHhc
Q 027511           68 EAASCGLLTVSTRVGGVPEVLPDDM-VVLAEPDPGDMVLAIRKAISL  113 (222)
Q Consensus        68 EAma~G~PvVa~~~gg~~e~i~~~~-~g~~~~~~~~la~~i~~ll~~  113 (222)
                      ..+.-+..+|.-+... .++-.... ..-...|+....++|...++.
T Consensus       112 ~~~~~~~~iI~Id~d~-~~i~~~~~~~~~i~~D~~~~l~~L~~~l~~  157 (183)
T d2ez9a1         112 KAFKNTRYFLQIDIDP-AKLGKRHKTDIAVLADAQKTLAAILAQVSE  157 (183)
T ss_dssp             TTTTTCSEEEEEESCG-GGTTSSSCCSEEEESCHHHHHHHHHHTCCC
T ss_pred             eecccccchheeeccH-HHHhhcCCCCeEEEECHHHHHHHHHHHhhh
Confidence            2234566777554432 22222111 112334666666666655544

>d1ybha1 c.31.1.3 (A:281-459) Acetohydroxyacid synthase catalytic subunit {Thale cress (Arabidopsis thaliana), chloroplast [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: DHS-like NAD/FAD-binding domain
superfamily: DHS-like NAD/FAD-binding domain
family: Pyruvate oxidase and decarboxylase, middle domain
domain: Acetohydroxyacid synthase catalytic subunit
species: Thale cress (Arabidopsis thaliana), chloroplast [TaxId: 3702]

Probab=85.05  E-value=2.5  Score=29.71  Aligned_cols=106  Identities=15%  Similarity=0.091  Sum_probs=61.8

Q ss_pred             EEEEcCCc--cHHHHHHHHHHcCCC----------------CcEEEeCCCChhHHHHHHHhccEEEEcC-CCccccHHHH
Q 027511            7 FIVGGDGP--KRVRLEEMREKHSLQ----------------DRVEMLGAVPHAQVRSVLISGHIFLNSS-LTEAFCIAIL   67 (222)
Q Consensus         7 lvi~G~g~--~~~~l~~~~~~~~l~----------------~~V~~~g~v~~~~~~~ll~~adv~v~~s-~~E~~g~~il   67 (222)
                      ++|+|.|-  ..+++.+++++++.+                ..+-..|.........++..||++|... ....+...-.
T Consensus        23 vii~G~G~~~a~~~l~~lae~~~~Pv~tt~~~~g~~~~~h~~~~G~~G~~g~~~~~~~~~~aDlil~lG~~l~~~~~~~~  102 (179)
T d1ybha1          23 VLYVGGGCLNSSDELGRFVELTGIPVASTLMGLGSYPCDDELSLHMLGMHGTVYANYAVEHSDLLLAFGVRFDDRVTGKL  102 (179)
T ss_dssp             EEEECGGGTTCHHHHHHHHHHHCCCEEECTTTTTSSCTTSTTEEEECSTTSCHHHHHHHHHCSEEEEESCCCCHHHHSSG
T ss_pred             EEEECHHHHHHHHHHHHHHhhhcccceecccccCCCccccccccccCCCcCCHHHHHHHHhhhhhhhccccccccccccc
Confidence            67888653  347899999999874                1234455555566778999999987543 3222111112


Q ss_pred             HHHHhCCcEEEeCCCCccccccCC-ceEEeCCCHHHHHHHHHHHHhc
Q 027511           68 EAASCGLLTVSTRVGGVPEVLPDD-MVVLAEPDPGDMVLAIRKAISL  113 (222)
Q Consensus        68 EAma~G~PvVa~~~gg~~e~i~~~-~~g~~~~~~~~la~~i~~ll~~  113 (222)
                      ....-+..+|.-+... .++-... ...-...|+....++|.+.++.
T Consensus       103 ~~~~~~~kiI~Id~d~-~~~~~~~~~~~~i~~D~~~~l~~L~~~l~~  148 (179)
T d1ybha1         103 EAFASRAKIVHIDIDS-AEIGKNKTPHVSVCGDVKLALQGMNKVLEN  148 (179)
T ss_dssp             GGTTTTSEEEEEESCT-TTTTSSSCCSEEEESCHHHHHHHHHHHHHH
T ss_pred             cccCCCCeEEEEeCcc-cccccccCCCceEEeccHHHHHHHHHHHHh
Confidence            3345566777655542 1221111 1122345787888888777764

>d1j4aa1 c.2.1.4 (A:104-300) D-lactate dehydrogenase {Lactobacillus helveticus [TaxId: 1587]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-lactate dehydrogenase
species: Lactobacillus helveticus [TaxId: 1587]

Probab=83.37  E-value=4.1  Score=29.30  Aligned_cols=80  Identities=9%  Similarity=0.008  Sum_probs=59.0

Q ss_pred             ceEEEEEcCCccHHHHHHHHHHcCCCCcEEEeCCCC----------hhHHHHHHHhccEEEE-cCC-Cc---cccHHHHH
Q 027511            4 KVRFIVGGDGPKRVRLEEMREKHSLQDRVEMLGAVP----------HAQVRSVLISGHIFLN-SSL-TE---AFCIAILE   68 (222)
Q Consensus         4 ~~~lvi~G~g~~~~~l~~~~~~~~l~~~V~~~g~v~----------~~~~~~ll~~adv~v~-~s~-~E---~~g~~ilE   68 (222)
                      +-++-|+|-|.--..+.++++.+|.  +|.......          .+++.++++.+|+++. .+. .+   -++-..+.
T Consensus        43 gk~vgIiG~G~IG~~va~~l~~fg~--~V~~~d~~~~~~~~~~~~~~~~l~~~l~~sDii~~~~plt~~T~~li~~~~l~  120 (197)
T d1j4aa1          43 DQVVGVVGTGHIGQVFMQIMEGFGA--KVITYDIFRNPELEKKGYYVDSLDDLYKQADVISLHVPDVPANVHMINDESIA  120 (197)
T ss_dssp             GSEEEEECCSHHHHHHHHHHHHTTC--EEEEECSSCCHHHHHTTCBCSCHHHHHHHCSEEEECSCCCGGGTTCBSHHHHH
T ss_pred             CCeEEEecccccchhHHHhHhhhcc--cccccCcccccccccceeeeccccccccccccccccCCccccccccccHHHHh
Confidence            4578999999999999999998886  465554321          2468899999998764 333 22   35778888


Q ss_pred             HHHhCCcEEEeCCCCcc
Q 027511           69 AASCGLLTVSTRVGGVP   85 (222)
Q Consensus        69 Ama~G~PvVa~~~gg~~   85 (222)
                      .|.-|.-+|-+..|++.
T Consensus       121 ~mk~~a~lIN~sRG~iv  137 (197)
T d1j4aa1         121 KMKQDVVIVNVSRGPLV  137 (197)
T ss_dssp             HSCTTEEEEECSCGGGB
T ss_pred             hhCCccEEEecCchhhh
Confidence            88888888887777654

>d1t9ba1 c.31.1.3 (A:290-460) Acetohydroxyacid synthase catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: DHS-like NAD/FAD-binding domain
superfamily: DHS-like NAD/FAD-binding domain
family: Pyruvate oxidase and decarboxylase, middle domain
domain: Acetohydroxyacid synthase catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=80.57  E-value=6.9  Score=26.98  Aligned_cols=105  Identities=14%  Similarity=0.083  Sum_probs=57.7

Q ss_pred             EEEEcCCc-----cHHHHHHHHHHcCCC----------------CcEEEeCCCChhHHHHHHHhccEEEEcC-C---Ccc
Q 027511            7 FIVGGDGP-----KRVRLEEMREKHSLQ----------------DRVEMLGAVPHAQVRSVLISGHIFLNSS-L---TEA   61 (222)
Q Consensus         7 lvi~G~g~-----~~~~l~~~~~~~~l~----------------~~V~~~g~v~~~~~~~ll~~adv~v~~s-~---~E~   61 (222)
                      ++|+|.|-     ..+++.+++++++.+                ..+-..|.........++..+|+.+.-. .   ..+
T Consensus        14 vii~G~G~~~~~~a~~~l~~lae~~g~Pv~tt~~~~g~~~~~hp~~~G~~g~~~~~~a~~~~~~~Dlvl~~G~~l~~~~~   93 (171)
T d1t9ba1          14 VLYVGAGILNHADGPRLLKELSDRAQIPVTTTLQGLGSFDQEDPKSLDMLGMHGCATANLAVQNADLIIAVGARFDDRVT   93 (171)
T ss_dssp             EEEECGGGGGSTTHHHHHHHHHHHTTCCEEECGGGTTSSCTTSTTEEEECSTTSCHHHHHHHHHCSEEEEESCCCCTTTS
T ss_pred             EEEECcChhhhhhHHHHHHHHHHhcCCceeecccccccccCCcccccccccccccHHHHhhhhcccceeecccccccccc
Confidence            67888653     235799999999885                1234455555677889999999976533 2   222


Q ss_pred             ccHH------HHHHHHhCCcEEEeCCCCccccccCCc-eEEeCCCHHHHHHHHHHHHh
Q 027511           62 FCIA------ILEAASCGLLTVSTRVGGVPEVLPDDM-VVLAEPDPGDMVLAIRKAIS  112 (222)
Q Consensus        62 ~g~~------ilEAma~G~PvVa~~~gg~~e~i~~~~-~g~~~~~~~~la~~i~~ll~  112 (222)
                      ++..      -....--+..+|.-+... .|+-.... ..-...|+.+..++|.+.+.
T Consensus        94 ~~~~~~~~~~~~~~~~~~~~iI~Id~d~-~el~~~~~~d~~i~~D~~~~l~~L~~~l~  150 (171)
T d1t9ba1          94 GNISKFAPEARRAAAEGRGGIIHFEVSP-KNINKVVQTQIAVEGDATTNLGKMMSKIF  150 (171)
T ss_dssp             CSGGGSSHHHHHHHHTTSCEEEEEESCG-GGSSSSSCCSEEEESCHHHHHHHHHTTSC
T ss_pred             cccchhhhhhhhcccCCCceEEEEeCCc-cccCCcccCceeEEEcHHHHHHHHHHhcc
Confidence            2222      123344566676544432 12222111 11223466666666654443