Citrus Sinensis ID: 027569

---

Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-
Protein Sequence
MGIQTMGSQSNGQQSHLQPSLVRQNSWYSLTLNEVENQLGNLGKPLGSMNLDELLKSVWSTEANDSTGIDIENSSTASSSLQRQASLTLARALSGKTVEQVWNEIQQGQKKRYGQEMKSHQREPTLGELTLEDFLVQAGLFAEASVSPMDLDTVGVVTMQSFPEKMSLSPSSSIGTLTPRRKRDDNAFEKSIERRLRRKIKNRESAARSRARKQVAYNCSY
Secondary Structure (PSIPRED)
ccccccccccccccccccccccccccccHHHHHHHHHHHcccccccccccHHHHHHHccccccccccccccccccccccccccHHHHHHHHcccccccccccHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccc
Secondary Structure Prediction (SSPRO)
ccccccccccccccccccccccccccEEEEcHHHHHHHHcccccccccccHHHHHHHccccHHcccccccccccccccccccccccccccHHHcHHcHHHHHHHHHHccccccccccccccccccccHccHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccc
Coil and Loop (DISEMBL)
mgiqtmgsqsngqqshlqpslvrqnswYSLTLNEVENQlgnlgkplgsmnlDELLKSVWSteandstgidiensstassSLQRQASLTLARALSGKTVEQVWNEIQQGQKKRYGqemkshqreptlgeltLEDFLVQAGlfaeasvspmdldtVGVVTMqsfpekmslspsssigtltprrkrddnAFEKSIERRLRRKIKNRESAARSRARKQVAYNCSY
Flexible Loop (DISEMBL)
MGIqtmgsqsngqqshlqpSLVRQNSWYSLTLNEVENQLGNLGKPLGSMNLDELLKSVWSTEANDstgidiensstassslQRQASLTLARALSGKTVEQVWNEIQQGQKKRYGQEMKSHQREPTLGELTLEDFLVQAGLFAEASVSPMDLDTVGVVTMQsfpekmslspsssigtltprrkrddnafeksierrlrrkiknresaarsrarkqvayncsy
Low Complexity Region (SEG)
MGIQTMGSQSNGQQSHLQPSLVRQNSWYSLTLNEVENQLGNLGKPLGSMNLDELLKSVWSTEANDSTGIDIENSSTASSSLQRQASLTLARALSGKTVEQVWNEIQQGQKKRYGQEMKSHQREPTLGELTLEDFLVQAGLFAEASVSPMDLDTVGVVTMQSFPEKMSLSPSSSIGTLTPRRKRDDNAFEKSIERRLRRKIKNRESAARSRARKQVAYNCSY
Disordered region (IsUnstruct)
************************NSWYSLTLNEVENQLGNLGKPLGSMNLDELLKSVW*****************************************VW************************GELTLEDFLVQAGLFAEASVSPMDLDTVGVVT***************************************************************
Disordered Region (DISOPRED)
***************************YSLTLNEVENQL*N*GK*LGSMNLDELLKSVW***************************************************************************LVQAGLF********************************************************************************
Disordered Region (DISEMBL)
*******************SLVRQNSWYSLTLNEVENQLGNLGKPLGSMNLDELLKSVWSTEANDSTGIDIEN***********ASLTLARALSGKTVEQVWNEI*****************EPTLGELTLEDFLVQAGLFAEASVSPMDLDTVGVVTMQSFPE***********TLTPRRKRDDNAFEKSIERRLRRKIK********************
Disordered Region (DISPRO)
**********************RQNSWYSLTLNEVENQLGNLGKPLGSMNLDELLKSVWST*************************LTLARALSGKTVEQVWNEIQQGQ****************LGELTLEDFLVQAGLFAE****************************************************************RS*********CSY
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MGIQTMGSQSNGQQSHLQPSLVRQNSWYSLTLNEVENQLGNLGKPLGSMNLDELLKSVWSTEANDSTGIDIENSSTASSSLQRQASLTLARALSGKTVEQVWNEIQQGQKKRYGQEMKSHQREPTLGELTLEDFLVQAGLFAEASVSPMDLDTVGVVTMQSFPEKMSLSPSSSIGTLTPRRKRDDNAFEKSIERRLRRKIKNRESAARSRARKQVAYNCSY
Positional Conservation
no confident homologs detected

---

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	221	2.2.26 [Sep-21-2011]
Q9LES3	297	ABSCISIC ACID-INSENSITIVE	yes	no	0.882	0.656	0.441	3e-37
Q9C5Q2	262	ABSCISIC ACID-INSENSITIVE	no	no	0.873	0.736	0.424	3e-32
Q9M7Q5	392	ABSCISIC ACID-INSENSITIVE	no	no	0.597	0.336	0.421	2e-21
Q9M7Q2	431	ABSCISIC ACID-INSENSITIVE	no	no	0.556	0.285	0.407	4e-19
Q8RYD6	331	ABSCISIC ACID-INSENSITIVE	no	no	0.809	0.540	0.362	9e-19
Q9M7Q3	454	ABSCISIC ACID-INSENSITIVE	no	no	0.556	0.270	0.372	3e-18
Q9M7Q4	416	ABSCISIC ACID-INSENSITIVE	no	no	0.542	0.288	0.433	3e-17
Q6ZDF3	318	bZIP transcription factor	no	no	0.429	0.298	0.417	4e-14
Q9SJN0	442	Protein ABSCISIC ACID-INS	no	no	0.561	0.280	0.321	5e-14
Q9FMM7	370	ABSCISIC ACID-INSENSITIVE	no	no	0.470	0.281	0.382	9e-09

>sp|Q9LES3|AI5L2_ARATH ABSCISIC ACID-INSENSITIVE 5-like protein 2 OS=Arabidopsis thaliana GN=DPBF3 PE=1 SV=1

 Score =  155 bits (391), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 105/238 (44%), Positives = 133/238 (55%), Gaps = 43/238 (18%)

Query: 20  SLVRQNSWYSLTLNEVENQLGNLGKPLGSMNLDELLKSVWSTEANDSTGIDIENSSTASS 79
           SL RQ+S YSLTL+EV+N LG+ GK LGSMNLDELLKSV S EAN  + + +   + A  
Sbjct: 15  SLNRQSSLYSLTLDEVQNHLGSSGKALGSMNLDELLKSVCSVEANQPSSMAVNGGAAAQE 74

Query: 80  SLQRQASLTLARALSGKTVEQVWNEIQQGQKKRYGQEMKSHQREPTLGELTLEDFLVQAG 139
            L RQ SLTL R LS KTV++VW +IQQ   K  G   +   ++PTLGE+TLED L++AG
Sbjct: 75  GLSRQGSLTLPRDLSKKTVDEVWKDIQQN--KNGGSAHERRDKQPTLGEMTLEDLLLKAG 132

Query: 140 LFAEA------------------SVSPMDLDTVG----VVTMQSFPEKMSLSP------- 170
           +  E                   +    ++  VG       + S P+  +  P       
Sbjct: 133 VVTETIPGSNHDGPVGGGSAGSGAGLGQNITQVGPWIQYHQLPSMPQPQAFMPYPVSDMQ 192

Query: 171 -----SSSIGTL----TPRRKR--DDNAFEKSIERRLRRKIKNRESAARSRARKQVAY 217
                SS +G L    TP RKR       EK++ERR +R IKNRESAARSRARKQ AY
Sbjct: 193 AMVSQSSLMGGLSDTQTPGRKRVASGEVVEKTVERRQKRMIKNRESAARSRARKQ-AY 249

Binds to the embryo specification element and the ABA-responsive element (ABRE) of the Dc3 gene promoter. Could participate in abscisic acid-regulated gene expression during seed development.
Arabidopsis thaliana (taxid: 3702)

>sp|Q9C5Q2|AI5L3_ARATH ABSCISIC ACID-INSENSITIVE 5-like protein 3 OS=Arabidopsis thaliana GN=DPBF4 PE=1 SV=1

 Score =  138 bits (348), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 99/233 (42%), Positives = 127/233 (54%), Gaps = 40/233 (17%)

Query: 6   MGSQSNGQQSHLQPSLVRQNSWYSLTLNEVENQLGNLGKPLGSMNLDELLKSVWSTEAND 65
           MGS     +  +  SL RQNS YSL L+EV+  LG+ GKPLGSMNLDELLK+V       
Sbjct: 1   MGSIRGNIEEPISQSLTRQNSLYSLKLHEVQTHLGSSGKPLGSMNLDELLKTVL------ 54

Query: 66  STGIDIENSSTASSSLQRQASLTLARALSGKTVEQVWNEIQQGQKKRYGQEMKSHQREPT 125
                      A   L RQ SLTL R LS KTV++VW +IQQ  K   G    +  ++PT
Sbjct: 55  ---------PPAEEGLVRQGSLTLPRDLSKKTVDEVWRDIQQ-DKNGNGTSTTTTHKQPT 104

Query: 126 LGELTLEDFLVQAGLFAEASVSPMDLDTVGVVT----------------MQSFP----EK 165
           LGE+TLED L++AG+  E +V P + + V + +                  ++P    + 
Sbjct: 105 LGEITLEDLLLRAGVVTE-TVVPQE-NVVNIASNGQWVEYHHQPQQQQGFMTYPVCEMQD 162

Query: 166 MSLSPSSSIGTLTPRRKR-DDNAFEKSIERRLRRKIKNRESAARSRARKQVAY 217
           M +    S     P RKR      EK++ERR +R IKNRESAARSRARKQ AY
Sbjct: 163 MVMMGGLSDTPQAPGRKRVAGEIVEKTVERRQKRMIKNRESAARSRARKQ-AY 214

Binds to the embryo specification element and the ABA-responsive element (ABRE) of the Dc3 gene promoter and to the ABRE of the Em1 gene promoter. Could participate in abscisic acid-regulated gene expression during seed development.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9M7Q5|AI5L4_ARATH ABSCISIC ACID-INSENSITIVE 5-like protein 4 OS=Arabidopsis thaliana GN=ABF1 PE=1 SV=1

 Score =  102 bits (255), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 62/147 (42%), Positives = 86/147 (58%), Gaps = 15/147 (10%)

Query: 7   GSQSNGQQSHLQPSLVRQNSWYSLTLNEVENQLGNLGKPLGSMNLDELLKSVWSTEANDS 66
           G  S G +S     L RQ+S YSLT +E+++ LG  GK  GSMN+DELLK++W+ E  D+
Sbjct: 12  GDTSRGNESK---PLARQSSLYSLTFDELQSTLGEPGKDFGSMNMDELLKNIWTAE--DT 66

Query: 67  TGIDIENSSTAS----------SSLQRQASLTLARALSGKTVEQVWNEIQQGQKKRYGQE 116
                  SS A+          + LQRQ SLTL R LS KTV++VW  +   +       
Sbjct: 67  QAFMTTTSSVAAPGPSGFVPGGNGLQRQGSLTLPRTLSQKTVDEVWKYLNSKEGSNGNTG 126

Query: 117 MKSHQREPTLGELTLEDFLVQAGLFAE 143
             + +R+ TLGE+TLEDFL++AG+  E
Sbjct: 127 TDALERQQTLGEMTLEDFLLRAGVVKE 153

Binds to the ABA-responsive element (ABRE). Could participate in abscisic acid-regulated gene expression.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9M7Q2|AI5L7_ARATH ABSCISIC ACID-INSENSITIVE 5-like protein 7 OS=Arabidopsis thaliana GN=ABF4 PE=1 SV=1

 Score = 94.7 bits (234), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 57/140 (40%), Positives = 80/140 (57%), Gaps = 17/140 (12%)

Query: 21  LVRQNSWYSLTLNEVENQLGNLGKPLGSMNLDELLKSVWSTEANDSTGIDIENSSTASS- 79
           L RQ+S YSLT +E++N LG  GK  GSMN+DELLKS+W+ E   +  +    ++TA + 
Sbjct: 34  LARQSSVYSLTFDELQNTLGGPGKDFGSMNMDELLKSIWTAEEAQAMAMTSAPAATAVAQ 93

Query: 80  ----------SLQRQASLTLARALSGKTVEQVWNEI--QQGQKKRYGQEMKSHQREP--- 124
                     +LQRQ SLTL R +S KTV++VW  +  + G  +            P   
Sbjct: 94  PGAGIPPPGGNLQRQGSLTLPRTISQKTVDEVWKCLITKDGNMEGSSGGGGESNVPPGRQ 153

Query: 125 -TLGELTLEDFLVQAGLFAE 143
            TLGE+TLE+FL +AG+  E
Sbjct: 154 QTLGEMTLEEFLFRAGVVRE 173

Functions as transcriptional activator in the ABA-inducible expression of rd29B. Binds specifically to the ABA-responsive element (ABRE) of the rd29B gene promoter.

Arabidopsis thaliana (taxid: 3702)

>sp|Q8RYD6|AI5L1_ARATH ABSCISIC ACID-INSENSITIVE 5-like protein 1 OS=Arabidopsis thaliana GN=DPBF2 PE=1 SV=1

 Score = 93.6 bits (231), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 82/226 (36%), Positives = 112/226 (49%), Gaps = 47/226 (20%)

Query: 23  RQNSWYSLTLNEVENQLGNLGKPLGSMNLDELLKSVWST-EANDSTGIDIENSSTASSSL 81
           RQNS  SLTL+E++ + G   K  G+MN+DE L ++W+T E ND+ G    N     + L
Sbjct: 37  RQNSILSLTLDEIQMKSG---KSFGAMNMDEFLANLWTTVEENDNEGGGAHNDGEKPAVL 93

Query: 82  QRQASLTLARALSGKTVEQVWNEIQQGQKKR-----YGQEMKSH-QREPTLGELTLEDFL 135
            RQ SL+L   L  KTV++VW EIQ G ++       GQ    + +R+ TLGE+TLEDFL
Sbjct: 94  PRQGSLSLPVPLCKKTVDEVWLEIQNGVQQHPPSSNSGQNSAENIRRQQTLGEITLEDFL 153

Query: 136 VQAGLFAEASVSPMDLDT----------VGV-------------VTMQSFPEKMSLSPSS 172
           V+AG+  E   + M + +          VG+             V  ++ P    L  SS
Sbjct: 154 VKAGVVQEPLKTTMRMSSSDFGYNPEFGVGLHCQNQNNYGDNRSVYSENRPFYSVLGESS 213

Query: 173 SIGTLTPR-------------RKR-DDNAFEKSIERRLRRKIKNRE 204
           S  T   R             +KR  D   E  +ERR RR IKNRE
Sbjct: 214 SCMTGNGRSNQYLTGLDAFRIKKRIIDGPPEILMERRQRRMIKNRE 259

Could participate in abscisic acid-regulated gene expression during seed development.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9M7Q3|AI5L6_ARATH ABSCISIC ACID-INSENSITIVE 5-like protein 6 OS=Arabidopsis thaliana GN=ABF3 PE=1 SV=1

 Score = 91.7 bits (226), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 60/161 (37%), Positives = 85/161 (52%), Gaps = 38/161 (23%)

Query: 21  LVRQNSWYSLTLNEVENQLGN-LGKPLGSMNLDELLKSVWSTE------ANDSTGIDIEN 73
           L RQNS +SLT +E +N  G  +GK  GSMN+DELLK++W+ E       N+++  +I N
Sbjct: 27  LTRQNSVFSLTFDEFQNSWGGGIGKDFGSMNMDELLKNIWTAEESHSMMGNNTSYTNISN 86

Query: 74  SSTASS---------------------------SLQRQASLTLARALSGKTVEQVWNEIQ 106
            ++ ++                           SLQRQ SLTL R +S K V+ VW E+ 
Sbjct: 87  GNSGNTVINGGGNNIGGLAVGVGGESGGFFTGGSLQRQGSLTLPRTISQKRVDDVWKELM 146

Query: 107 Q----GQKKRYGQEMKSHQREPTLGELTLEDFLVQAGLFAE 143
           +    G     G      QR+ TLGE+TLE+FLV+AG+  E
Sbjct: 147 KEDDIGNGVVNGGTSGIPQRQQTLGEMTLEEFLVRAGVVRE 187

Binds to the ABA-responsive element (ABRE). Mediates stress-responsive ABA signaling.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9M7Q4|AI5L5_ARATH ABSCISIC ACID-INSENSITIVE 5-like protein 5 OS=Arabidopsis thaliana GN=ABF2 PE=1 SV=1

 Score = 88.6 bits (218), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 59/136 (43%), Positives = 80/136 (58%), Gaps = 16/136 (11%)

Query: 21  LVRQNSWYSLTLNEVENQLGNLGKPLGSMNLDELLKSVWS---TEANDSTGIDIENSSTA 77
           L RQ S YSLT +E ++   ++GK  GSMN+DELLK++WS   T+A  S  + +      
Sbjct: 21  LTRQGSIYSLTFDEFQS---SVGKDFGSMNMDELLKNIWSAEETQAMASGVVPVLGGGQE 77

Query: 78  SSSLQRQASLTLARALSGKTVEQVWNEIQQ-GQKKRYGQEM---------KSHQREPTLG 127
              LQRQ SLTL R LS KTV+QVW ++ + G     G  +            QR+ TLG
Sbjct: 78  GLQLQRQGSLTLPRTLSQKTVDQVWKDLSKVGSSGVGGSNLSQVAQAQSQSQSQRQQTLG 137

Query: 128 ELTLEDFLVQAGLFAE 143
           E+TLE+FLV+AG+  E
Sbjct: 138 EVTLEEFLVRAGVVRE 153

Involved in ABA and stress responses and acts as a positive component of glucose signal transduction. Functions as transcriptional activator in the ABA-inducible expression of rd29B. Binds specifically to the ABA-responsive element (ABRE) of the rd29B gene promoter.

Arabidopsis thaliana (taxid: 3702)

>sp|Q6ZDF3|TRAB1_ORYSJ bZIP transcription factor TRAB1 OS=Oryza sativa subsp. japonica GN=TRAB1 PE=1 SV=1

 Score = 78.2 bits (191), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 43/103 (41%), Positives = 64/103 (62%), Gaps = 8/103 (7%)

Query: 49  MNLDELLKSVWSTEANDSTGIDIENSSTASSSLQRQASLTLARALSGKTVEQVWNEIQQ- 107
           MN+DELL+S+W+ E + +       ++ A   LQRQ SLTL R LS KTV++VW ++++ 
Sbjct: 1   MNMDELLRSIWTAEESQAMASASAAAAAAEGGLQRQGSLTLPRTLSVKTVDEVWRDLERE 60

Query: 108 -------GQKKRYGQEMKSHQREPTLGELTLEDFLVQAGLFAE 143
                        G E +  +R+PTLGE+TLE+FLV+AG+  E
Sbjct: 61  ASPGAAAADGGGGGGEQQQPRRQPTLGEMTLEEFLVRAGVVRE 103

Transcription activator that mediates abscisic acid (ABA) signaling. Binds specifically to the ABA-responsive element (ABRE) of the EMP1 and RAB16A gene promoters.

Oryza sativa subsp. japonica (taxid: 39947)

>sp|Q9SJN0|ABI5_ARATH Protein ABSCISIC ACID-INSENSITIVE 5 OS=Arabidopsis thaliana GN=ABI5 PE=1 SV=1

 Score = 77.8 bits (190), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 63/196 (32%), Positives = 85/196 (43%), Gaps = 72/196 (36%)

Query: 14  QSHLQPSLVRQNSWYSLTLNEVENQLGNLGKPLGSMNLDELLKSVWST------------ 61
           ++H   SL RQ+S YSLTL+E ++ L   GK  GSMN+DE L S+W+             
Sbjct: 30  ENHPFTSLGRQSSIYSLTLDEFQHALCENGKNFGSMNMDEFLVSIWNAEENNNNQQQAAA 89

Query: 62  -------------------------------------EANDSTGIDIENSSTASSSLQRQ 84
                                                +AN+  GI  E      SSL RQ
Sbjct: 90  AAGSHSVPANHNGFNNNNNNGGEGGVGVFSGGSRGNEDANNKRGIANE------SSLPRQ 143

Query: 85  ASLTLARALSGKTVEQVWNEIQQGQKKRYGQEM-----------------KSHQREPTLG 127
            SLTL   L  KTV++VW+EI +G     G +                  ++  R+PT G
Sbjct: 144 GSLTLPAPLCRKTVDEVWSEIHRGGGSGNGGDSNGRSSSSNGQNNAQNGGETAARQPTFG 203

Query: 128 ELTLEDFLVQAGLFAE 143
           E+TLEDFLV+AG+  E
Sbjct: 204 EMTLEDFLVKAGVVRE 219

Participates in ABA-regulated gene expression during seed development and subsequent vegetative stage by acting as the major mediator of ABA repression of growth. Binds to the embryo specification element and the ABA-responsive element (ABRE) of the Dc3 gene promoter and to the ABRE of the Em1 and Em6 genes promoters. Can also trans-activate its own promoter, suggesting that it is autoregulated. Plays a role in sugar-mediated senescence.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9FMM7|AI5L8_ARATH ABSCISIC ACID-INSENSITIVE 5-like protein 8 OS=Arabidopsis thaliana GN=BZIP15 PE=2 SV=1

 Score = 60.5 bits (145), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 47/123 (38%), Positives = 65/123 (52%), Gaps = 19/123 (15%)

Query: 20  SLVRQNSWYSLTLNEVENQLGNLGKPLGSMNLDELLKSVWSTEANDSTGIDIENSSTASS 79
           SL RQ S YS T+++ +    +LG   GSMN+DEL+K + S E         E S     
Sbjct: 19  SLSRQGSIYSWTVDQFQT---SLGLDCGSMNMDELVKHISSAEETQ------EGS----- 64

Query: 80  SLQRQASLTLARALSGKTVEQVWNEI--QQGQKKRYGQEMKSH-QREPTLGELTLEDFLV 136
             QRQ S TL   LS + V +VW  I  ++      G    +H Q + TLGE+TLE+F +
Sbjct: 65  --QRQGSTTLPPTLSKQNVGEVWKSITEEKHTNNNGGVTNITHLQGQQTLGEITLEEFFI 122

Query: 137 QAG 139
           +AG
Sbjct: 123 RAG 125

Could participate in abscisic acid-regulated gene expression.

Arabidopsis thaliana (taxid: 3702)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	221
224054496	261	predicted protein [Populus trichocarpa]	0.954	0.808	0.723	2e-78
224104595	264	predicted protein [Populus trichocarpa]	0.954	0.799	0.731	2e-76
255549144	238	DNA binding protein, putative [Ricinus c	0.945	0.878	0.722	1e-74
356550905	271	PREDICTED: ABSCISIC ACID-INSENSITIVE 5-l	0.986	0.804	0.693	6e-74
356574569	274	PREDICTED: ABSCISIC ACID-INSENSITIVE 5-l	0.986	0.795	0.653	5e-68
444300784	264	bZIP transcription factor family protein	0.972	0.814	0.636	4e-67
225435989	248	PREDICTED: ABSCISIC ACID-INSENSITIVE 5-l	0.895	0.798	0.617	1e-65
147836035	262	hypothetical protein VITISV_032518 [Viti	0.900	0.759	0.606	2e-63
449452690	270	PREDICTED: ABSCISIC ACID-INSENSITIVE 5-l	0.981	0.803	0.608	3e-63
449525480	270	PREDICTED: LOW QUALITY PROTEIN: ABSCISIC	0.981	0.803	0.604	2e-62

>gi|224054496|ref|XP_002298289.1| predicted protein [Populus trichocarpa] gi|222845547|gb|EEE83094.1| predicted protein [Populus trichocarpa]

 Score =  297 bits (761), Expect = 2e-78,   Method: Compositional matrix adjust.
 Identities = 157/217 (72%), Positives = 176/217 (81%), Gaps = 6/217 (2%)

Query: 6   MGSQSNGQQSHLQPS-LVRQNSWYSLTLNEVENQLGNLGKPLGSMNLDELLKSVWSTEAN 64
           M SQSNGQQSH+QP  L+RQ SWY+LTLNEVENQ+GNLGKPL SMNLDELLK+VWSTEAN
Sbjct: 1   MASQSNGQQSHMQPCQLMRQTSWYNLTLNEVENQMGNLGKPLCSMNLDELLKNVWSTEAN 60

Query: 65  DSTGIDIENSSTASSSLQRQASLTLARALSGKTVEQVWNEIQQGQKKRYGQEMKSHQREP 124
            S G+D E  STA+SSLQRQAS TLARALSGKTV QVW EIQ+GQKKR+GQEMK  +RE 
Sbjct: 61  QSMGMDSE--STATSSLQRQASFTLARALSGKTVAQVWKEIQEGQKKRFGQEMKVQEREQ 118

Query: 125 TLGELTLEDFLVQAGLFAEASVSP-MDLDTVGVVTMQSFPEKMSLSPSSSIGTLTPRRKR 183
           TLGE TLEDFLVQAGLF EA++SP +DL TV  VT Q FP+ M LS S S GTL+     
Sbjct: 119 TLGETTLEDFLVQAGLFTEATISPSLDLVTVAAVTPQCFPQNMVLSSSPSTGTLSDSTTS 178

Query: 184 --DDNAFEKSIERRLRRKIKNRESAARSRARKQVAYN 218
             + +A EKS ERRL+RKIKNRESAARSRARKQ  +N
Sbjct: 179 GWNRDAPEKSTERRLKRKIKNRESAARSRARKQAYHN 215

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224104595|ref|XP_002313493.1| predicted protein [Populus trichocarpa] gi|222849901|gb|EEE87448.1| predicted protein [Populus trichocarpa]

 Score =  291 bits (744), Expect = 2e-76,   Method: Compositional matrix adjust.
 Identities = 161/220 (73%), Positives = 182/220 (82%), Gaps = 9/220 (4%)

Query: 6   MGSQSNGQQSHLQP-SLVRQNSWYSLTLNEVENQLGNLGKPLGSMNLDELLKSVWSTEAN 64
           M SQ NGQQSHLQP  L RQNSWY+LTLNEVENQLGNLGKPL SMNLDELLK+VWSTEA+
Sbjct: 1   MASQRNGQQSHLQPYRLTRQNSWYNLTLNEVENQLGNLGKPLCSMNLDELLKNVWSTEAH 60

Query: 65  DSTGIDIENSSTASSSLQRQASLTLARALSGKTVEQVWNEIQQGQKKRYGQEMKSHQREP 124
            S G+D E  ST+ SSLQ QASLTLARALSGKTV+QVW EIQQGQ+KR+G+EMK  +RE 
Sbjct: 61  QSVGMDSE--STSMSSLQHQASLTLARALSGKTVDQVWKEIQQGQEKRFGEEMKVQEREQ 118

Query: 125 TLGELTLEDFLVQAGLFAEASVSP-MDLDTVGVVTMQSFPEKMSLSPSSSIGTLTPR--- 180
           TLGE+TLEDFLVQAGLFA+A++SP +DL TV  VT QSF +KM LS S S  TL+     
Sbjct: 119 TLGEMTLEDFLVQAGLFAKATISPSLDLVTVDAVTPQSFSQKMVLSSSPSTSTLSDTTTS 178

Query: 181 -RKRDD-NAFEKSIERRLRRKIKNRESAARSRARKQVAYN 218
            RKRD  +AFEKSIER+L+RKIKNRESAARSRARKQ  +N
Sbjct: 179 GRKRDTPDAFEKSIERKLKRKIKNRESAARSRARKQAYHN 218

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255549144|ref|XP_002515627.1| DNA binding protein, putative [Ricinus communis] gi|223545265|gb|EEF46772.1| DNA binding protein, putative [Ricinus communis]

 Score =  285 bits (728), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 159/220 (72%), Positives = 180/220 (81%), Gaps = 11/220 (5%)

Query: 6   MGSQSNGQQSHLQPS--LVRQNSWYSLTLNEVENQLGNLGKPLGSMNLDELLKSVWSTEA 63
           MGSQSNGQQSHLQP   L RQNSW+SLTLNEVENQL NLGKPLGSMNLDELLK+VWSTEA
Sbjct: 1   MGSQSNGQQSHLQPPYQLRRQNSWFSLTLNEVENQLENLGKPLGSMNLDELLKNVWSTEA 60

Query: 64  NDSTGIDIENSSTASSSLQRQASLTLARALSGKTVEQVWNEIQQGQKKRYGQEMKSHQRE 123
           N    +DIEN+S+ASS  Q+ +    ARALSGKTV+QVW EI QGQKKR+ QE K+ ++E
Sbjct: 61  NH---LDIENTSSASSLQQQSSLTL-ARALSGKTVDQVWKEILQGQKKRFCQETKAQEKE 116

Query: 124 PTLGELTLEDFLVQAGLFAEASVSPMDLDTVGVVTMQSFPEKMSLSPSSSIGTLTPR--- 180
           PTLGE+TLEDFLVQAGLFAEAS+SPM+L TV  VT QSFP+KM+LS S S GTL+     
Sbjct: 117 PTLGEITLEDFLVQAGLFAEASLSPMELVTVDTVTPQSFPQKMALSSSPSTGTLSDTMAS 176

Query: 181 -RKRD-DNAFEKSIERRLRRKIKNRESAARSRARKQVAYN 218
            +KRD  +  EKSIERRLRRKIKNRESAARSRARKQ  +N
Sbjct: 177 VQKRDAPDTVEKSIERRLRRKIKNRESAARSRARKQAYHN 216

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356550905|ref|XP_003543823.1| PREDICTED: ABSCISIC ACID-INSENSITIVE 5-like protein 3-like [Glycine max]

 Score =  282 bits (722), Expect = 6e-74,   Method: Compositional matrix adjust.
 Identities = 156/225 (69%), Positives = 183/225 (81%), Gaps = 7/225 (3%)

Query: 1   MGIQTMGSQSNGQQSHLQPS-LVRQNSWYSLTLNEVENQLGNLGKPLGSMNLDELLKSVW 59
           MGIQTMGSQ NGQQSHLQPS L RQ SWYSLTL+EV  QLG++GKPLGSMNLDELL++VW
Sbjct: 1   MGIQTMGSQGNGQQSHLQPSSLSRQGSWYSLTLDEVNCQLGDMGKPLGSMNLDELLQNVW 60

Query: 60  STEANDSTGIDIENSS-TASSSLQRQASLTLARALSGKTVEQVWNEIQQGQKKRYGQEMK 118
           + EA+ S  I  E+ + ++SSSLQRQASLTLARALSGKTV+ VW EIQQGQKKRYG+++K
Sbjct: 61  TAEASKSLVIGAESENMSSSSSLQRQASLTLARALSGKTVDDVWREIQQGQKKRYGEDVK 120

Query: 119 SHQREPTLGELTLEDFLVQAGLFAEASVSP-MDLDTVGVVTMQSFPEKMSLSPSSSIGTL 177
           S + E TLGE TLEDFLVQAGLFAEAS+SP + LDT+     Q F +K  L  S SIG+L
Sbjct: 121 SQEGEMTLGETTLEDFLVQAGLFAEASISPAVGLDTMDSSAAQGFQQKTGLLSSPSIGSL 180

Query: 178 T---PRRKRD-DNAFEKSIERRLRRKIKNRESAARSRARKQVAYN 218
           +   P RKRD  +A+EK++ERRLRRKIKNRESAARSRARKQ  +N
Sbjct: 181 SDTRPGRKRDAPDAYEKTLERRLRRKIKNRESAARSRARKQAYHN 225

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356574569|ref|XP_003555418.1| PREDICTED: ABSCISIC ACID-INSENSITIVE 5-like protein 2-like [Glycine max]

 Score =  263 bits (671), Expect = 5e-68,   Method: Compositional matrix adjust.
 Identities = 149/228 (65%), Positives = 179/228 (78%), Gaps = 10/228 (4%)

Query: 1   MGIQTMGSQSNGQQSHLQPS-LVRQNSWYSLTLNEVENQLGNLGKPLGSMNLDELLKSVW 59
           MGIQT+GS  NGQQSHLQPS L RQ SWYSLTL+EV  QLG++GKPLGSMNLDELL++VW
Sbjct: 1   MGIQTVGSLGNGQQSHLQPSSLSRQGSWYSLTLDEVNCQLGDMGKPLGSMNLDELLQNVW 60

Query: 60  STEANDST---GIDIENSSTASSSLQRQASLTLARALSGKTVEQVWNEIQQGQKKRYGQE 116
           + EA+ S+   G++ EN S++SSSLQRQASLTLARALSGKTV+ VW EIQQGQKK+YG++
Sbjct: 61  TAEASKSSVVVGVESENMSSSSSSLQRQASLTLARALSGKTVDDVWREIQQGQKKKYGED 120

Query: 117 MKSHQREPTLGELTLEDFLVQAGLFAEASVSP-MDLDTVGVVTMQSFPEKMSLSPSSSIG 175
           ++S + E TLGE TLEDFLVQAGLFAEAS+SP + LD +  +  Q F +K  L  SS   
Sbjct: 121 VRSQEGEMTLGETTLEDFLVQAGLFAEASISPAVGLDAMDSLATQGFQQKTGLLSSSPSI 180

Query: 176 TLTPR----RKRD-DNAFEKSIERRLRRKIKNRESAARSRARKQVAYN 218
                    RKRD  +A+EK++ERRLRRKIKNRESAARSRARKQ  +N
Sbjct: 181 GSLSDTRLGRKRDASDAYEKTLERRLRRKIKNRESAARSRARKQAYHN 228

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|444300784|gb|AGD98701.1| bZIP transcription factor family protein 3 [Camellia sinensis]

 Score =  259 bits (663), Expect = 4e-67,   Method: Compositional matrix adjust.
 Identities = 142/223 (63%), Positives = 173/223 (77%), Gaps = 8/223 (3%)

Query: 1   MGIQTMGSQSNGQQSHLQPSLVRQNSWYSLTLNEVENQLGNLGKPLGSMNLDELLKSVWS 60
           MGIQTMGS  +GQQ HLQP   RQNSW+  TL E++NQLG+LGKPLGSMNLDELLK+VW+
Sbjct: 1   MGIQTMGSHGSGQQPHLQP-FSRQNSWFGFTLEEIDNQLGDLGKPLGSMNLDELLKNVWT 59

Query: 61  TEANDSTGIDIENSSTASSSLQRQASLTLARALSGKTVEQVWNEIQQGQKKRYGQEMKSH 120
            EAN STG+D  +SS+++SSLQRQASL+LARA SGKTV++VW +IQQGQK +  +EMK  
Sbjct: 60  AEANQSTGMDT-DSSSSASSLQRQASLSLARAFSGKTVDEVWRDIQQGQKMKNVEEMKGQ 118

Query: 121 QREPTLGELTLEDFLVQAGLFAEASVSPMDLDTVGVVTMQSFPEKMSLSPSSSIGTLT-- 178
           +RE TL E+TLEDFLV+AGLFAE S  P  +     VT Q    ++ LSPS+SI TL+  
Sbjct: 119 EREQTLSEITLEDFLVKAGLFAEVSSGPF-IRADNAVTCQKPLSQIGLSPSTSIDTLSDT 177

Query: 179 --PRRKRD-DNAFEKSIERRLRRKIKNRESAARSRARKQVAYN 218
             P RKR   +A E++I+RRLRRKIKNRESAARSRARKQ  +N
Sbjct: 178 PAPGRKRHATDAIERTIDRRLRRKIKNRESAARSRARKQAYHN 220

Source: Camellia sinensis

Species: Camellia sinensis

Genus: Camellia

Family: Theaceae

Order: Ericales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225435989|ref|XP_002269808.1| PREDICTED: ABSCISIC ACID-INSENSITIVE 5-like protein 2 [Vitis vinifera]

 Score =  254 bits (650), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 134/217 (61%), Positives = 166/217 (76%), Gaps = 19/217 (8%)

Query: 6   MGSQSNGQQSHLQPSLVRQNSWYSLTLNEVENQLGNLGKPLGSMNLDELLKSVWSTEAND 65
           MGSQ  GQ       LVRQ+SWYSLTL+EVENQLG+LGKPLGSMN+DELLK+VW  EAN 
Sbjct: 1   MGSQVGGQ-------LVRQSSWYSLTLDEVENQLGDLGKPLGSMNVDELLKNVWMAEANQ 53

Query: 66  STGIDIENSSTASSSLQRQASLTLARALSGKTVEQVWNEIQQGQKKRYGQEMKSHQREPT 125
               DI+N+S+   SLQRQASLT+A+ALS KTVE+VW++IQQG+KK+ G ++K   REPT
Sbjct: 54  CVSADIDNASS-KISLQRQASLTIAQALSEKTVEEVWSDIQQGEKKKCGDDIKGQVREPT 112

Query: 126 LGELTLEDFLVQAGLFAEASVSPMDLDTVGVVTMQSFPEKMSLSPSSSIGTLT----PRR 181
           LGE+ LEDFLV+A +F +       LD VGVVT  +FP++M LSPS S+GTL+    P  
Sbjct: 113 LGEMKLEDFLVKAAVFVKG------LDIVGVVTPPNFPQQMGLSPSPSVGTLSDTSIPGH 166

Query: 182 KRDDNAFEKSIERRLRRKIKNRESAARSRARKQVAYN 218
           +R D + EK++ERRL+RKIKNRESAARSRARKQ  +N
Sbjct: 167 ER-DASMEKTVERRLKRKIKNRESAARSRARKQAYHN 202

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147836035|emb|CAN63966.1| hypothetical protein VITISV_032518 [Vitis vinifera]

 Score =  248 bits (632), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 131/216 (60%), Positives = 162/216 (75%), Gaps = 17/216 (7%)

Query: 6   MGSQSNGQQSHLQPSLVRQNSWYSLTLNEVENQLGNLGKPLGSMNLDELLKSVWSTEAND 65
           MGS   GQ       LVRQ+SWYSLTL+EVENQLG+LGKPLGSMN+DELLK+VW  EAN 
Sbjct: 1   MGSXVGGQ-------LVRQSSWYSLTLDEVENQLGDLGKPLGSMNVDELLKNVWMAEANQ 53

Query: 66  STGIDIENSSTASSSLQRQASLTLARALSGKTVEQVWNEIQQGQKKRYGQEMKSHQREPT 125
               DI+N+S+   SLQRQASLT+A+ALS KTVE+VW++IQQG+KK+ G ++K   REPT
Sbjct: 54  CVSADIDNASS-KISLQRQASLTIAQALSEKTVEEVWSDIQQGEKKKCGDDIKGQVREPT 112

Query: 126 LGELTLEDFLVQAGLFAEASVSPMDLDTVGVVTMQSFPEKMSLSPSSSIGTLTPRR---K 182
           LGE+ LEDFLV+A +F +       LD VGVVT  +FP++M LSPS S+GTL+       
Sbjct: 113 LGEMKLEDFLVKAAVFVKG------LDIVGVVTPPNFPQQMGLSPSPSVGTLSDTSIXGH 166

Query: 183 RDDNAFEKSIERRLRRKIKNRESAARSRARKQVAYN 218
             D + EK++ERRL+RKIKNRESAARSRARKQ  +N
Sbjct: 167 XRDASMEKTVERRLKRKIKNRESAARSRARKQAYHN 202

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449452690|ref|XP_004144092.1| PREDICTED: ABSCISIC ACID-INSENSITIVE 5-like protein 2-like [Cucumis sativus]

 Score =  246 bits (629), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 137/225 (60%), Positives = 172/225 (76%), Gaps = 8/225 (3%)

Query: 1   MGIQTMGSQSNGQQSHLQP-SLVRQNSWYSLTLNEVENQLGNLGKPLGSMNLDELLKSVW 59
           MGIQTMGSQ NGQQSHL P SL RQNSWY LTL+E++NQLG +GKPLGSMNLDELL ++W
Sbjct: 1   MGIQTMGSQLNGQQSHLHPASLPRQNSWYGLTLDEIKNQLGGMGKPLGSMNLDELLHNIW 60

Query: 60  STEANDSTGIDIENSSTASSSLQRQASLTLARALSGKTVEQVWNEIQQGQKKRYGQEMKS 119
           + EAN S G++ E+SS+    LQRQAS +LARALSGKTV+ VW EIQ+GQKK+  + +KS
Sbjct: 61  TAEANQSMGMESESSSSVHY-LQRQASFSLARALSGKTVDHVWKEIQEGQKKKNRENLKS 119

Query: 120 HQREPTLGELTLEDFLVQAGLFAEASVSPMDLDTVGVVTMQSFPEKM-----SLSPSSSI 174
              E TLG++TLEDFL+QAG++AEAS SP+D      +T ++F  +M     SLS  +  
Sbjct: 120 QNSETTLGDVTLEDFLIQAGIYAEASPSPLDAIDTMTLTEKNFSPEMGLLSSSLSLGTLS 179

Query: 175 GTLTPRRKRD-DNAFEKSIERRLRRKIKNRESAARSRARKQVAYN 218
            T  P+R+RD  +  EK++ERRL+RKIKNRESAARSRARKQ  +N
Sbjct: 180 DTTIPKRRRDPSDTLEKTMERRLKRKIKNRESAARSRARKQAYHN 224

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449525480|ref|XP_004169745.1| PREDICTED: LOW QUALITY PROTEIN: ABSCISIC ACID-INSENSITIVE 5-like protein 2-like [Cucumis sativus]

 Score =  244 bits (624), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 136/225 (60%), Positives = 171/225 (76%), Gaps = 8/225 (3%)

Query: 1   MGIQTMGSQSNGQQSHLQP-SLVRQNSWYSLTLNEVENQLGNLGKPLGSMNLDELLKSVW 59
           MGIQTMGSQ NGQQSHL P SL RQNSWY LTL+E++NQLG +GKPLGSMNLDELL ++W
Sbjct: 1   MGIQTMGSQLNGQQSHLHPASLPRQNSWYGLTLDEIKNQLGGMGKPLGSMNLDELLHNIW 60

Query: 60  STEANDSTGIDIENSSTASSSLQRQASLTLARALSGKTVEQVWNEIQQGQKKRYGQEMKS 119
           + EAN S G++ E+SS+    LQRQAS +LARALSGKTV+ VW EIQ+GQK +  + +KS
Sbjct: 61  TAEANQSMGMESESSSSVHY-LQRQASFSLARALSGKTVDHVWKEIQEGQKXKNRENLKS 119

Query: 120 HQREPTLGELTLEDFLVQAGLFAEASVSPMDLDTVGVVTMQSFPEKM-----SLSPSSSI 174
              E TLG++TLEDFL+QAG++AEAS SP+D      +T ++F  +M     SLS  +  
Sbjct: 120 QNSETTLGDVTLEDFLIQAGIYAEASPSPLDAIDTMTLTEKNFSPEMGLLSSSLSLGTLS 179

Query: 175 GTLTPRRKRD-DNAFEKSIERRLRRKIKNRESAARSRARKQVAYN 218
            T  P+R+RD  +  EK++ERRL+RKIKNRESAARSRARKQ  +N
Sbjct: 180 DTTIPKRRRDPSDTLEKTMERRLKRKIKNRESAARSRARKQAYHN 224

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	221
TAIR|locus:2103665	297	AREB3 "ABA-responsive element	0.615	0.457	0.514	8.4e-41
TAIR|locus:2063275	262	EEL "AT2G41070" [Arabidopsis t	0.882	0.744	0.424	3e-30
TAIR|locus:2076018	331	DPBF2 "AT3G44460" [Arabidopsis	0.579	0.386	0.420	8.4e-28
TAIR|locus:2049425	442	ABI5 "ABA INSENSITIVE 5" [Arab	0.285	0.142	0.444	1.6e-26
UNIPROTKB|Q8RZ35	388	P0489B03.11 "Putative ABA resp	0.461	0.262	0.372	1.7e-19
UNIPROTKB|Q6ZDF3	318	TRAB1 "bZIP transcription fact	0.429	0.298	0.417	8.7e-16
TAIR|locus:2118969	454	ABF3 "AT4G34000" [Arabidopsis	0.325	0.158	0.443	4.2e-15
TAIR|locus:2159986	370	AT5G42910 "AT5G42910" [Arabido	0.470	0.281	0.382	7.9e-09
TAIR|locus:2024224	270	GBF4 "G-box binding factor 4"	0.529	0.433	0.397	8.6e-09
TAIR|locus:2172507	315	AT5G44080 [Arabidopsis thalian	0.651	0.457	0.325	2.3e-06

TAIR|locus:2103665 AREB3 "ABA-responsive element binding protein 3" [Arabidopsis thaliana (taxid:3702)]

 Score = 323 (118.8 bits), Expect = 8.4e-41, Sum P(2) = 8.4e-41
 Identities = 71/138 (51%), Positives = 90/138 (65%)

Query:     6 MGSQSNGQQSHLQPSLVRQNSWYSLTLNEVENQLGNLGKPLGSMNLDELLKSVWSTEAND 65
             M SQ    +     SL RQ+S YSLTL+EV+N LG+ GK LGSMNLDELLKSV S EAN 
Sbjct:     1 MDSQRGIVEQAKSQSLNRQSSLYSLTLDEVQNHLGSSGKALGSMNLDELLKSVCSVEANQ 60

Query:    66 STGIDIENSSTASSSLQRQASLTLARALSGKTVEQVWNEIQQGQKKRYGQEMKSHQREPT 125
              + + +   + A   L RQ SLTL R LS KTV++VW +IQQ   K  G   +   ++PT
Sbjct:    61 PSSMAVNGGAAAQEGLSRQGSLTLPRDLSKKTVDEVWKDIQQN--KNGGSAHERRDKQPT 118

Query:   126 LGELTLEDFLVQAGLFAE 143
             LGE+TLED L++AG+  E
Sbjct:   119 LGEMTLEDLLLKAGVVTE 136

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA;ISS;TAS

GO:0005634 "nucleus" evidence=ISM;IDA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA;TAS

GO:0043565 "sequence-specific DNA binding" evidence=IEA

GO:0046983 "protein dimerization activity" evidence=IEA

GO:0003677 "DNA binding" evidence=ISS;IPI

GO:0009737 "response to abscisic acid stimulus" evidence=IDA

GO:0009738 "abscisic acid mediated signaling pathway" evidence=RCA

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=RCA

TAIR|locus:2063275 EEL "AT2G41070" [Arabidopsis thaliana (taxid:3702)]

 Score = 334 (122.6 bits), Expect = 3.0e-30, P = 3.0e-30
 Identities = 98/231 (42%), Positives = 125/231 (54%)

Query:     6 MGSQSNGQQSHLQPSLVRQNSWYSLTLNEVENQLGNLGKPLGSMNLDELLKSVWSTEAND 65
             MGS     +  +  SL RQNS YSL L+EV+  LG+ GKPLGSMNLDELLK+V       
Sbjct:     1 MGSIRGNIEEPISQSLTRQNSLYSLKLHEVQTHLGSSGKPLGSMNLDELLKTVLPP---- 56

Query:    66 STGIDIENSSTASSSLQRQASLTLARALSGKTVEQVWNEIQQGQKKRYGQEMKSHQREPT 125
                        A   L RQ SLTL R LS KTV++VW +IQQ  K   G    +  ++PT
Sbjct:    57 -----------AEEGLVRQGSLTLPRDLSKKTVDEVWRDIQQ-DKNGNGTSTTTTHKQPT 104

Query:   126 LGELTLEDFLVQAGLFAEASVSPMDLDTVGV----VTMQSFPEKMS---------LSPSS 172
             LGE+TLED L++AG+  E  V   ++  +      V     P++           +    
Sbjct:   105 LGEITLEDLLLRAGVVTETVVPQENVVNIASNGQWVEYHHQPQQQQGFMTYPVCEMQDMV 164

Query:   173 SIGTLT-----PRRKR-DDNAFEKSIERRLRRKIKNRESAARSRARKQVAY 217
              +G L+     P RKR      EK++ERR +R IKNRESAARSRARKQ AY
Sbjct:   165 MMGGLSDTPQAPGRKRVAGEIVEKTVERRQKRMIKNRESAARSRARKQ-AY 214

GO:0003677 "DNA binding" evidence=ISS;IDA

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA;ISS;TAS

GO:0005634 "nucleus" evidence=ISM;IDA;TAS

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA;ISS

GO:0043565 "sequence-specific DNA binding" evidence=IEA

GO:0046983 "protein dimerization activity" evidence=IEA

GO:0009738 "abscisic acid mediated signaling pathway" evidence=RCA;TAS

GO:0009410 "response to xenobiotic stimulus" evidence=RCA

GO:0030968 "endoplasmic reticulum unfolded protein response" evidence=RCA

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=RCA

GO:0048522 "positive regulation of cellular process" evidence=RCA

TAIR|locus:2076018 DPBF2 "AT3G44460" [Arabidopsis thaliana (taxid:3702)]

 Score = 233 (87.1 bits), Expect = 8.4e-28, Sum P(2) = 8.4e-28
 Identities = 58/138 (42%), Positives = 83/138 (60%)

Query:    23 RQNSWYSLTLNEVENQLGNLGKPLGSMNLDELLKSVWST-EANDSTGIDIENSSTASSSL 81
             RQNS  SLTL+E++ + G   K  G+MN+DE L ++W+T E ND+ G    N     + L
Sbjct:    37 RQNSILSLTLDEIQMKSG---KSFGAMNMDEFLANLWTTVEENDNEGGGAHNDGEKPAVL 93

Query:    82 QRQASLTLARALSGKTVEQVWNEIQQGQKKR-----YGQEMKSH-QREPTLGELTLEDFL 135
              RQ SL+L   L  KTV++VW EIQ G ++       GQ    + +R+ TLGE+TLEDFL
Sbjct:    94 PRQGSLSLPVPLCKKTVDEVWLEIQNGVQQHPPSSNSGQNSAENIRRQQTLGEITLEDFL 153

Query:   136 VQAGLFAEASVSPMDLDT 153
             V+AG+  E   + M + +
Sbjct:   154 VKAGVVQEPLKTTMRMSS 171

GO:0003677 "DNA binding" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA;ISS

GO:0005634 "nucleus" evidence=ISM;IDA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0043565 "sequence-specific DNA binding" evidence=IEA

GO:0046983 "protein dimerization activity" evidence=IEA

GO:0033613 "activating transcription factor binding" evidence=IPI

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=RCA;IDA

GO:0009410 "response to xenobiotic stimulus" evidence=RCA

GO:0009738 "abscisic acid mediated signaling pathway" evidence=RCA

GO:0030968 "endoplasmic reticulum unfolded protein response" evidence=RCA

TAIR|locus:2049425 ABI5 "ABA INSENSITIVE 5" [Arabidopsis thaliana (taxid:3702)]

 Score = 131 (51.2 bits), Expect = 1.6e-26, Sum P(4) = 1.6e-26
 Identities = 28/63 (44%), Positives = 40/63 (63%)

Query:     4 QTMGSQSNGQQSHLQPSLVRQNSWYSLTLNEVENQLGNLGKPLGSMNLDELLKSVWSTEA 63
             Q   +   G ++H   SL RQ+S YSLTL+E ++ L   GK  GSMN+DE L S+W+ E 
Sbjct:    20 QARHNGGGGGENHPFTSLGRQSSIYSLTLDEFQHALCENGKNFGSMNMDEFLVSIWNAEE 79

Query:    64 NDS 66
             N++
Sbjct:    80 NNN 82

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA;ISS;TAS

GO:0005634 "nucleus" evidence=ISM;IDA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA;IMP;TAS

GO:0043565 "sequence-specific DNA binding" evidence=IEA

GO:0046983 "protein dimerization activity" evidence=IEA

GO:0048316 "seed development" evidence=IMP

GO:0009414 "response to water deprivation" evidence=IEP

GO:0009651 "response to salt stress" evidence=IEP

GO:0009737 "response to abscisic acid stimulus" evidence=IEP;RCA;IMP

GO:0003677 "DNA binding" evidence=IDA

GO:0010182 "sugar mediated signaling pathway" evidence=RCA;TAS

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=RCA;IDA

GO:0005515 "protein binding" evidence=IPI

GO:0010200 "response to chitin" evidence=IEP

GO:0009739 "response to gibberellin stimulus" evidence=IEP

GO:0009845 "seed germination" evidence=IEP;RCA

GO:0010187 "negative regulation of seed germination" evidence=IMP

GO:0009640 "photomorphogenesis" evidence=RCA

GO:0009686 "gibberellin biosynthetic process" evidence=RCA

GO:0009738 "abscisic acid mediated signaling pathway" evidence=RCA

GO:0009740 "gibberellic acid mediated signaling pathway" evidence=RCA

GO:0009793 "embryo development ending in seed dormancy" evidence=RCA

GO:0009909 "regulation of flower development" evidence=RCA

GO:0009933 "meristem structural organization" evidence=RCA

GO:0010162 "seed dormancy process" evidence=RCA

GO:0010228 "vegetative to reproductive phase transition of meristem" evidence=RCA

GO:0016567 "protein ubiquitination" evidence=RCA

GO:0019915 "lipid storage" evidence=RCA

GO:0050826 "response to freezing" evidence=RCA

UNIPROTKB|Q8RZ35 P0489B03.11 "Putative ABA response element binding factor" [Oryza sativa Japonica Group (taxid:39947)]

 Score = 155 (59.6 bits), Expect = 1.7e-19, Sum P(2) = 1.7e-19
 Identities = 44/118 (37%), Positives = 64/118 (54%)

Query:     4 QTMGSQSNGQQSHLQPSLVRQNSWYSLTLNEVENQLGNLGKPLGSMNLDELLKSVWSTEA 63
             Q+ G++  G++  + P L RQ+S  SLTL E++N L   G+  GSMN+DE + ++W+ E 
Sbjct:    24 QSGGTKVGGEEE-IAP-LARQSSILSLTLEELQNSLCEPGRNFGSMNMDEFVANIWNAEE 81

Query:    64 -NDSTG-----------IDIENSS--TASSSLQRQASLTLARALSGKTVEQVWNEIQQ 107
                +TG           +D  + S     S L RQ S +L   L  KTVE+VW EI Q
Sbjct:    82 FQATTGGCKGAMEEAKVVDSGSGSGDAGGSGLCRQGSFSLPLPLCQKTVEEVWTEINQ 139

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IDA

GO:0005634 "nucleus" evidence=IMP

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IDA

GO:0009409 "response to cold" evidence=IMP

GO:0009414 "response to water deprivation" evidence=IMP

GO:0009651 "response to salt stress" evidence=IMP

GO:0009737 "response to abscisic acid stimulus" evidence=IMP

GO:0010152 "pollen maturation" evidence=IMP

GO:0043565 "sequence-specific DNA binding" evidence=IDA

UNIPROTKB|Q6ZDF3 TRAB1 "bZIP transcription factor TRAB1" [Oryza sativa Japonica Group (taxid:39947)]

 Score = 199 (75.1 bits), Expect = 8.7e-16, P = 8.7e-16
 Identities = 43/103 (41%), Positives = 64/103 (62%)

Query:    49 MNLDELLKSVWSTEANDSTGIDIENSSTASSSLQRQASLTLARALSGKTVEQVWNEIQQG 108
             MN+DELL+S+W+ E + +       ++ A   LQRQ SLTL R LS KTV++VW ++++ 
Sbjct:     1 MNMDELLRSIWTAEESQAMASASAAAAAAEGGLQRQGSLTLPRTLSVKTVDEVWRDLERE 60

Query:   109 QKKRY--------GQEMKSHQREPTLGELTLEDFLVQAGLFAE 143
                          G E +  +R+PTLGE+TLE+FLV+AG+  E
Sbjct:    61 ASPGAAAADGGGGGGEQQQPRRQPTLGEMTLEEFLVRAGVVRE 103

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IDA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IDA

GO:0009738 "abscisic acid mediated signaling pathway" evidence=IDA

GO:0044212 "transcription regulatory region DNA binding" evidence=IDA

TAIR|locus:2118969 ABF3 "AT4G34000" [Arabidopsis thaliana (taxid:3702)]

 Score = 138 (53.6 bits), Expect = 4.2e-15, Sum P(2) = 4.2e-15
 Identities = 35/79 (44%), Positives = 47/79 (59%)

Query:    80 SLQRQASLTLARALSGKTVEQVWNEIQQ----GQKKRYGQEMKSHQREPTLGELTLEDFL 135
             SLQRQ SLTL R +S K V+ VW E+ +    G     G      QR+ TLGE+TLE+FL
Sbjct:   120 SLQRQGSLTLPRTISQKRVDDVWKELMKEDDIGNGVVNGGTSGIPQRQQTLGEMTLEEFL 179

Query:   136 VQAGLFAEASVSPMDLDTV 154
             V+AG+  E    P  +++V
Sbjct:   180 VRAGVVRE---EPQPVESV 195

GO:0003677 "DNA binding" evidence=ISS;IPI

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA;ISS;TAS

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA;TAS

GO:0043565 "sequence-specific DNA binding" evidence=IEA

GO:0046983 "protein dimerization activity" evidence=IEA

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=RCA;IDA

GO:0009738 "abscisic acid mediated signaling pathway" evidence=RCA;IMP

GO:0009737 "response to abscisic acid stimulus" evidence=IEP;RCA;IDA

GO:0005515 "protein binding" evidence=IPI

GO:0009414 "response to water deprivation" evidence=IEP

GO:0009651 "response to salt stress" evidence=IEP;RCA

GO:0000303 "response to superoxide" evidence=RCA

GO:0007165 "signal transduction" evidence=RCA

GO:0008219 "cell death" evidence=RCA

GO:0009755 "hormone-mediated signaling pathway" evidence=RCA

GO:0009863 "salicylic acid mediated signaling pathway" evidence=RCA

GO:0009873 "ethylene mediated signaling pathway" evidence=RCA

TAIR|locus:2159986 AT5G42910 "AT5G42910" [Arabidopsis thaliana (taxid:3702)]

 Score = 150 (57.9 bits), Expect = 7.9e-09, P = 7.9e-09
 Identities = 47/123 (38%), Positives = 65/123 (52%)

Query:    20 SLVRQNSWYSLTLNEVENQLGNLGKPLGSMNLDELLKSVWSTEANDSTGIDIENSSTASS 79
             SL RQ S YS T+++ +    +LG   GSMN+DEL+K + S E         E S     
Sbjct:    19 SLSRQGSIYSWTVDQFQT---SLGLDCGSMNMDELVKHISSAEETQ------EGS----- 64

Query:    80 SLQRQASLTLARALSGKTVEQVWNEIQQGQ--KKRYGQEMKSH-QREPTLGELTLEDFLV 136
               QRQ S TL   LS + V +VW  I + +      G    +H Q + TLGE+TLE+F +
Sbjct:    65 --QRQGSTTLPPTLSKQNVGEVWKSITEEKHTNNNGGVTNITHLQGQQTLGEITLEEFFI 122

Query:   137 QAG 139
             +AG
Sbjct:   123 RAG 125

GO:0003677 "DNA binding" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA;ISS;TAS

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA;TAS

GO:0043565 "sequence-specific DNA binding" evidence=IEA

GO:0046983 "protein dimerization activity" evidence=IEA

GO:0009410 "response to xenobiotic stimulus" evidence=RCA

GO:0030968 "endoplasmic reticulum unfolded protein response" evidence=RCA

TAIR|locus:2024224 GBF4 "G-box binding factor 4" [Arabidopsis thaliana (taxid:3702)]

 Score = 147 (56.8 bits), Expect = 8.6e-09, P = 8.6e-09
 Identities = 54/136 (39%), Positives = 70/136 (51%)

Query:    94 SGKTVEQVWNEIQQGQKKRYGQEMKSHQREPTLGELTLEDFLVQA----GLFAEASVS-P 148
             +GK+V+ VW EI  G++K     MK  + E  +   TLEDFL +A    G   E  V  P
Sbjct:    83 NGKSVDDVWKEIVSGEQKTI--MMKEEEPEDIM---TLEDFLAKAEMDEGASDEIDVKIP 137

Query:   149 MD-LDTVGVVTMQSFPEKMSLS---PSSSIGTLTPRRKRDD---NAFEKSIERRLRRKIK 201
              + L+  G  T   FP +   S      S+G    R KR      A +K+  +R +R IK
Sbjct:   138 TERLNNDGSYTFD-FPMQRHSSFQMVEGSMGGGVTRGKRGRVMMEAMDKAAAQRQKRMIK 196

Query:   202 NRESAARSRARKQVAY 217
             NRESAARSR RKQ AY
Sbjct:   197 NRESAARSRERKQ-AY 211

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA;ISS

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0009507 "chloroplast" evidence=ISM

GO:0043565 "sequence-specific DNA binding" evidence=IEA;IDA

GO:0046983 "protein dimerization activity" evidence=IEA

GO:0003677 "DNA binding" evidence=IDA

GO:0005634 "nucleus" evidence=IDA

TAIR|locus:2172507 AT5G44080 [Arabidopsis thaliana (taxid:3702)]

 Score = 130 (50.8 bits), Expect = 2.3e-06, P = 2.3e-06
 Identities = 57/175 (32%), Positives = 80/175 (45%)

Query:    65 DSTGIDIENSSTASSSLQRQASLTLARALSGKTVEQVWNEIQQGQKKRYGQEMKSHQREP 124
             D++   +E ++T +S +      T      GK+V+++W E+  G+    G+ MK    E 
Sbjct:    90 DASPAPMEITTTTASDVVDHGGGT-ETTRGGKSVDEIWREMVSGE----GKGMKEETSEE 144

Query:   125 TLGELTLEDFLVQAGLFAEASV--SPMDLDTVGVVTMQSF--------PEKMSLSPSSSI 174
              +   TLEDFL +A +  E +V  S  DLD    VT   F        P +M      SI
Sbjct:   145 IM---TLEDFLAKAAVEDETAVTASAEDLDVKIPVTNYGFDHSAPPHNPFQMIDKVEGSI 201

Query:   175 ------------GTLTPRRKRDDNAFEKSIERRLRRKIKNRESAARSRARKQVAY 217
                         G    R +      +K+  +R RR IKNRESAARSR RKQ AY
Sbjct:   202 VAFGNGLDVYGGGARGKRARVMVEPLDKAAAQRQRRMIKNRESAARSRERKQ-AY 255


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.309   0.124   0.336    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      221       221   0.00095  112 3  11 23  0.47    33
                                                     32  0.40    36


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  10
  No. of states in DFA:  598 (64 KB)
  Total size of DFA:  162 KB (2096 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  24.49u 0.20s 24.69t   Elapsed:  00:00:01
  Total cpu time:  24.49u 0.20s 24.69t   Elapsed:  00:00:01
  Start:  Fri May 10 23:08:35 2013   End:  Fri May 10 23:08:36 2013

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA;ISS

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0043565 "sequence-specific DNA binding" evidence=IEA

GO:0046983 "protein dimerization activity" evidence=IEA

GO:0009410 "response to xenobiotic stimulus" evidence=RCA

GO:0030968 "endoplasmic reticulum unfolded protein response" evidence=RCA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	221
smart00338	65	smart00338, BRLZ, basic region leucin zipper	2e-04
pfam00170	64	pfam00170, bZIP_1, bZIP transcription factor	0.004

>gnl|CDD|197664 smart00338, BRLZ, basic region leucin zipper

 Score = 38.3 bits (90), Expect = 2e-04
 Identities = 13/22 (59%), Positives = 18/22 (81%)

Query: 193 ERRLRRKIKNRESAARSRARKQ 214
           E+R RR+ +NRE+A RSR RK+
Sbjct: 4   EKRRRRRERNREAARRSRERKK 25

Length = 65

>gnl|CDD|201054 pfam00170, bZIP_1, bZIP transcription factor

 Score = 34.6 bits (80), Expect = 0.004
 Identities = 13/21 (61%), Positives = 17/21 (80%)

Query: 194 RRLRRKIKNRESAARSRARKQ 214
           +R RR+ KNRE+A RSR RK+
Sbjct: 5   KRERRRQKNREAARRSRLRKK 25

The Pfam entry includes the basic region and the leucine zipper region. Length = 64

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	221
KOG4343	655	consensus bZIP transcription factor ATF6 [Transcri	98.04
smart00338	65	BRLZ basic region leucin zipper.	98.03
PF00170	64	bZIP_1: bZIP transcription factor cAMP response el	97.72
PF07716	54	bZIP_2: Basic region leucine zipper; InterPro: IPR	97.56
KOG3584	348	consensus cAMP response element binding protein an	96.79
KOG0709	472	consensus CREB/ATF family transcription factor [Tr	96.52
PF03131	92	bZIP_Maf: bZIP Maf transcription factor; InterPro:	95.38
KOG4005	292	consensus Transcription factor XBP-1 [Transcriptio	93.63

>KOG4343 consensus bZIP transcription factor ATF6 [Transcription]

Probab=98.04  E-value=3.2e-06  Score=82.96  Aligned_cols=32  Identities=38%  Similarity=0.411  Sum_probs=29.2

Q ss_pred             hhhHHHHHHHHHhHhhHHHHHHHHHHHHHHhh
Q 027569          188 FEKSIERRLRRKIKNRESAARSRARKQVAYNC  219 (221)
Q Consensus       188 ~~~~~~rr~~R~~kNResa~rsR~rKq~~~~e  219 (221)
                      +|..+-+|+.|||||||||..||+||++|+.-
T Consensus       275 ~d~kv~krqQRmIKNResA~~SRkKKKEy~~~  306 (655)
T KOG4343|consen  275 SDIKVLKRQQRMIKNRESACQSRKKKKEYMLG  306 (655)
T ss_pred             cCHHHHHHHHHHHhhHHHHHHHHHHHHHHHHH
Confidence            57788899999999999999999999999854

>smart00338 BRLZ basic region leucin zipper

Probab=98.03  E-value=4.5e-06  Score=59.70  Aligned_cols=29  Identities=45%  Similarity=0.556  Sum_probs=26.9

Q ss_pred             HHHHHHHHhHhhHHHHHHHHHHHHHHhhc
Q 027569          192 IERRLRRKIKNRESAARSRARKQVAYNCS  220 (221)
Q Consensus       192 ~~rr~~R~~kNResa~rsR~rKq~~~~e~  220 (221)
                      ++++.+|+++||++|+++|.||++|+.+|
T Consensus         3 ~~k~~rR~~rNR~aA~~~R~rKk~~~~~L   31 (65)
T smart00338        3 DEKRRRRRERNREAARRSRERKKAEIEEL   31 (65)
T ss_pred             cHHHHHHHHHhHHHHHHHHHHHHHHHHHH
Confidence            46899999999999999999999999876

>PF00170 bZIP_1: bZIP transcription factor cAMP response element binding (CREB) protein signature fos transforming protein signature jun transcription factor signature; InterPro: IPR011616 The basic-leucine zipper (bZIP) transcription factors [, ] of eukaryotic are proteins that contain a basic region mediating sequence-specific DNA-binding followed by a leucine zipper region (see IPR002158 from INTERPRO) required for dimerization

Probab=97.72  E-value=2.6e-05  Score=55.64  Aligned_cols=28  Identities=43%  Similarity=0.555  Sum_probs=25.5

Q ss_pred             HHHHHHHhHhhHHHHHHHHHHHHHHhhc
Q 027569          193 ERRLRRKIKNRESAARSRARKQVAYNCS  220 (221)
Q Consensus       193 ~rr~~R~~kNResa~rsR~rKq~~~~e~  220 (221)
                      .++.+|+++||++|+++|.||++|+.+|
T Consensus         4 ~k~~~rr~rNR~AAr~~R~RKk~~~~~L   31 (64)
T PF00170_consen    4 DKRERRRERNREAARRSRQRKKQYIEEL   31 (64)
T ss_dssp             -CHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHhhHHHH
Confidence            5689999999999999999999999876

; GO: 0003700 sequence-specific DNA binding transcription factor activity, 0043565 sequence-specific DNA binding, 0046983 protein dimerization activity, 0006355 regulation of transcription, DNA-dependent; PDB: 2H7H_B 2OQQ_B 1S9K_E 1JNM_A 1JUN_A 1FOS_H 1A02_J 1T2K_C 1CI6_A 1DH3_C ....

>PF07716 bZIP_2: Basic region leucine zipper; InterPro: IPR011700 The basic-leucine zipper (bZIP) transcription factors [, ] of eukaryotes are proteins that contain a basic region mediating sequence-specific DNA-binding, followed by a leucine zipper region (see IPR002158 from INTERPRO), which is required for dimerization

Probab=97.56  E-value=8.2e-05  Score=51.75  Aligned_cols=29  Identities=45%  Similarity=0.531  Sum_probs=25.5

Q ss_pred             HHHHHHHHHhHhhHHHHHHHHHHHHHHhhc
Q 027569          191 SIERRLRRKIKNRESAARSRARKQVAYNCS  220 (221)
Q Consensus       191 ~~~rr~~R~~kNResa~rsR~rKq~~~~e~  220 (221)
                      .++.+.+|. +||++|+|+|+||++|+.+|
T Consensus         2 ~~~~~~rR~-rNr~AA~r~R~rkk~~~~~l   30 (54)
T PF07716_consen    2 DEEKRERRE-RNREAARRSRQRKKQREEEL   30 (54)
T ss_dssp             CHHHHHHHH-HHHHHHHHHHHHHHHHHHHH
T ss_pred             cHHHHHHHH-HHHHHHHHHHHHHHHHHHHH
Confidence            456788888 99999999999999998765

; GO: 0003700 sequence-specific DNA binding transcription factor activity, 0043565 sequence-specific DNA binding, 0046983 protein dimerization activity, 0006355 regulation of transcription, DNA-dependent; PDB: 1NWQ_A 1H89_B 1H88_A 1GTW_B 2E43_A 1IO4_A 1GU4_B 2E42_A 1H8A_B 1GU5_B ....

>KOG3584 consensus cAMP response element binding protein and related transcription factors [Transcription]

Probab=96.79  E-value=0.0011  Score=61.45  Aligned_cols=33  Identities=33%  Similarity=0.469  Sum_probs=29.4

Q ss_pred             hhhHHHHHHHHHhHhhHHHHHHHHHHHHHHhhc
Q 027569          188 FEKSIERRLRRKIKNRESAARSRARKQVAYNCS  220 (221)
Q Consensus       188 ~~~~~~rr~~R~~kNResa~rsR~rKq~~~~e~  220 (221)
                      .|....+|+-|++||||-|+.=|.||++|+.+|
T Consensus       285 aee~trKRevRLmKNREAARECRRKKKEYVKCL  317 (348)
T KOG3584|consen  285 AEEATRKREVRLMKNREAARECRRKKKEYVKCL  317 (348)
T ss_pred             chhhhhHHHHHHHhhHHHHHHHHHhHhHHHHHH
Confidence            456667899999999999999999999999876

>KOG0709 consensus CREB/ATF family transcription factor [Transcription]

Probab=96.52  E-value=0.0022  Score=62.27  Aligned_cols=44  Identities=18%  Similarity=0.116  Sum_probs=32.7

Q ss_pred             cccCCccccccHHH--HHHhhcCCCCCCCcccHHHHHhhhcCCCCc
Q 027569           21 LVRQNSWYSLTLNE--VENQLGNLGKPLGSMNLDELLKSVWSTEAN   64 (221)
Q Consensus        21 L~rQ~SiysLTldE--~q~~Lg~~GK~lgSMNmDElLknIwsaee~   64 (221)
                      .-|+..+|.++++-  +-..+.+..-++.-|-.|.+|.++|...+.
T Consensus        33 fd~~~~~~~~~e~~~~~d~~~~d~~~pl~~~e~~S~l~s~~~~~Ds   78 (472)
T KOG0709|consen   33 FDRDVKDTRLIENGSLGDDPVLDQTQPLKTEESYSALSSVIGSNDS   78 (472)
T ss_pred             cCccccchhhhhccccccccccccCCCCCcccccccchhhccCCCc
Confidence            45788888887754  333555666889999999999999986654

>PF03131 bZIP_Maf: bZIP Maf transcription factor; InterPro: IPR004826 There are several different types of Maf transcription factors with different roles in the cell

Probab=95.38  E-value=0.026  Score=43.12  Aligned_cols=33  Identities=27%  Similarity=0.228  Sum_probs=27.4

Q ss_pred             hhhHHHHHHHHHhHhhHHHHHHHHHHHHHHhhc
Q 027569          188 FEKSIERRLRRKIKNRESAARSRARKQVAYNCS  220 (221)
Q Consensus       188 ~~~~~~rr~~R~~kNResa~rsR~rKq~~~~e~  220 (221)
                      .+...-+..+|-+|||..|+++|.||..++.+|
T Consensus        24 ~q~~~lK~~RRr~KNR~~A~~cR~rk~~~~~~L   56 (92)
T PF03131_consen   24 EQIAELKQRRRRLKNRGYAQNCRKRKLDQIEEL   56 (92)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            344555778888999999999999999998765

MafG and MafH are small Mafs which lack a putative transactivation domain. They behave as transcriptional repressors when they dimerize among themselves. However they also serve as transcriptional activators by dimerizing with other (usually larger) basic-zipper proteins and recruiting them to specific DNA-binding sites. Maf transcription factors contain a conserved basic region leucine zipper (bZIP) domain, which mediates their dimerization and DNA binding property. Neural retina-specific leucine zipper proteins also belong to this family. Together with the basic region, the Maf extended homology region (EHR), conserved only within the Maf family, defines the DNA binding specific to Mafs. This structure enables Mafs to make a broader area of contact with DNA and to recognise longer DNA sequences. In particular, the two residues at the beginning of helix H2 are positioned to recognise the flanking region []. Small Maf proteins heterodimerize with Fos and may act as competitive repressors of the NF2-E2 transcription factor. In mouse, Maf1 may play an early role in axial patterning. Defects in these proteins are a cause of autosomal dominant retinitis pigmentosa. ; GO: 0003677 DNA binding, 0006355 regulation of transcription, DNA-dependent, 0005634 nucleus; PDB: 2KZ5_A 3A5T_A 1K1V_A 1SKN_P 2WT7_B 2WTY_B.

>KOG4005 consensus Transcription factor XBP-1 [Transcription]

Probab=93.63  E-value=0.065  Score=48.89  Aligned_cols=42  Identities=36%  Similarity=0.489  Sum_probs=31.5

Q ss_pred             CCCCCCCc-chhhhHHHHHHHHHhHhhHHHHHHHHHHHHHHhhc
Q 027569          178 TPRRKRDD-NAFEKSIERRLRRKIKNRESAARSRARKQVAYNCS  220 (221)
Q Consensus       178 ~~grkR~~-~~~~~~~~rr~~R~~kNResa~rsR~rKq~~~~e~  220 (221)
                      .+.|||.. +.. .-.|+=+||++|||.-|.-+|-||+|++.|+
T Consensus        53 ~~~rKr~RL~HL-S~EEK~~RrKLKNRVAAQtaRDrKKaRm~em   95 (292)
T KOG4005|consen   53 QPKRKRRRLDHL-SWEEKVQRRKLKNRVAAQTARDRKKARMEEM   95 (292)
T ss_pred             chHHHHHhhccc-CHHHHHHHHHHHHHHHHhhhhhHHHHHHHHH
Confidence            35566655 222 2345567899999999999999999998775

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	221
1dh3_A	55	Transcription factor CREB; protein-DNA complex, tr	7e-05

>1dh3_A Transcription factor CREB; protein-DNA complex, transcription/DNA complex; HET: DNA; 3.00A {Mus musculus} SCOP: h.1.3.1 Length = 55

 Score = 38.5 bits (90), Expect = 7e-05
 Identities = 10/21 (47%), Positives = 15/21 (71%)

Query: 194 RRLRRKIKNRESAARSRARKQ 214
           +R  R +KNRE+A  SR +K+
Sbjct: 1   KREVRLMKNREAARESRRKKK 21

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	221
1dh3_A	55	Transcription factor CREB; protein-DNA complex, tr	98.91
2wt7_A	63	Proto-oncogene protein C-FOS; transcription, trans	98.17
2dgc_A	63	Protein (GCN4); basic domain, leucine zipper, DNA	97.85
1t2k_D	61	Cyclic-AMP-dependent transcription factor ATF-2; p	97.81
1jnm_A	62	Proto-oncogene C-JUN; BZIP, protein-DNA complex, t	97.3
3a5t_A	107	Transcription factor MAFG; protein-DNA complex, BZ	96.26
1ci6_A	63	Transcription factor ATF-4; BZIP; 2.60A {Homo sapi	95.45
1gd2_E	70	Transcription factor PAP1; basic leucine zipper, p	94.38
1gu4_A	78	CAAT/enhancer binding protein beta; transcription/	89.51
1hjb_A	87	Ccaat/enhancer binding protein beta; transcription	86.13
1skn_P	92	DNA-binding domain of SKN-1; complex (transcriptio	82.94

>1dh3_A Transcription factor CREB; protein-DNA complex, transcription/DNA complex; HET: DNA; 3.00A {Mus musculus} SCOP: h.1.3.1

Probab=98.91  E-value=5e-10  Score=78.23  Aligned_cols=27  Identities=37%  Similarity=0.416  Sum_probs=25.5

Q ss_pred             HHHHHHhHhhHHHHHHHHHHHHHHhhc
Q 027569          194 RRLRRKIKNRESAARSRARKQVAYNCS  220 (221)
Q Consensus       194 rr~~R~~kNResa~rsR~rKq~~~~e~  220 (221)
                      +|++|||+|||||+|||.||++|+.+|
T Consensus         1 kr~rR~~~NResA~rSR~RKk~~~~~L   27 (55)
T 1dh3_A            1 KREVRLMKNREAARESRRKKKEYVKSL   27 (55)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             ChHHHHHhhHHHHHHHHHHHHHHHHHH
Confidence            489999999999999999999999987

>2wt7_A Proto-oncogene protein C-FOS; transcription, transcription regulation, nucleus, activator, repressor, DNA-binding, phosphoprotein, differentiation; 2.30A {Mus musculus} PDB: 1fos_E* 1a02_F* 1s9k_D

Probab=98.17  E-value=8.5e-07  Score=62.91  Aligned_cols=28  Identities=29%  Similarity=0.417  Sum_probs=26.5

Q ss_pred             HHHHHHHhHhhHHHHHHHHHHHHHHhhc
Q 027569          193 ERRLRRKIKNRESAARSRARKQVAYNCS  220 (221)
Q Consensus       193 ~rr~~R~~kNResa~rsR~rKq~~~~e~  220 (221)
                      |+|++|+++||++|+|||.||++|+.+|
T Consensus         1 Ekr~rrrerNR~AA~rcR~rKk~~~~~L   28 (63)
T 2wt7_A            1 EKRRIRRERNKMAAAKCRNRRRELTDTL   28 (63)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             ChHHHHHHHhHHHHHHHHHHHHHHHHHH
Confidence            4799999999999999999999999887

>2dgc_A Protein (GCN4); basic domain, leucine zipper, DNA binding, eukaryotic regulatory protein, transcription/DNA complex; HET: DNA; 2.20A {Saccharomyces cerevisiae} SCOP: h.1.3.1 PDB: 1dgc_A* 1ld4_E 1ysa_C* 3p8m_D

Probab=97.85  E-value=6.5e-06  Score=58.69  Aligned_cols=26  Identities=35%  Similarity=0.357  Sum_probs=21.1

Q ss_pred             HHHHHhHhhHHHHHHHHHHHHHHhhc
Q 027569          195 RLRRKIKNRESAARSRARKQVAYNCS  220 (221)
Q Consensus       195 r~~R~~kNResa~rsR~rKq~~~~e~  220 (221)
                      +.++-.+|||+|+|||.||++|+.||
T Consensus        10 ~~~KR~rNreAArrsR~RK~~~~~~L   35 (63)
T 2dgc_A           10 AALKRARNTEAARRSRARKLQRMKQL   35 (63)
T ss_dssp             -CHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHhHHHHHHHHHHHHHHHHHH
Confidence            33334459999999999999999987

>1t2k_D Cyclic-AMP-dependent transcription factor ATF-2; protein DNA complex, transcription/DNA complex; 3.00A {Homo sapiens} SCOP: h.1.3.1

Probab=97.81  E-value=1e-05  Score=56.80  Aligned_cols=27  Identities=30%  Similarity=0.389  Sum_probs=25.3

Q ss_pred             HHHHHHhHhhHHHHHHHHHHHHHHhhc
Q 027569          194 RRLRRKIKNRESAARSRARKQVAYNCS  220 (221)
Q Consensus       194 rr~~R~~kNResa~rsR~rKq~~~~e~  220 (221)
                      +|++|+++||++|++||.||++|+.+|
T Consensus         1 kR~~r~erNr~AA~k~R~rKk~~~~~L   27 (61)
T 1t2k_D            1 KRRKFLERNRAAASRSRQKRKVWVQSL   27 (61)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CHHHHHHHhHHHHHHHHHHHHHHHHHH
Confidence            489999999999999999999999886

>1jnm_A Proto-oncogene C-JUN; BZIP, protein-DNA complex, transcription/DNA complex; 2.20A {Homo sapiens} SCOP: h.1.3.1 PDB: 1fos_F 2h7h_A 1t2k_C 1a02_J* 1s9k_E 1jun_A

Probab=97.30  E-value=0.00016  Score=50.77  Aligned_cols=26  Identities=31%  Similarity=0.386  Sum_probs=23.2

Q ss_pred             HHHHHhHhhHHHHHHHHHHHHHHhhc
Q 027569          195 RLRRKIKNRESAARSRARKQVAYNCS  220 (221)
Q Consensus       195 r~~R~~kNResa~rsR~rKq~~~~e~  220 (221)
                      +++|..+||++|++||.||++|+.+|
T Consensus         2 ~errr~rNr~AA~k~R~rKk~~~~~L   27 (62)
T 1jnm_A            2 AERKRMRNRIAASKSRKRKLERIARL   27 (62)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             hHHHHHHhHHHHHHHHHHHHHHHHHH
Confidence            46677889999999999999999886

>3a5t_A Transcription factor MAFG; protein-DNA complex, BZIP factor, acetylation, DNA-binding, isopeptide bond, nucleus; 2.80A {Mus musculus}

Probab=96.26  E-value=0.0048  Score=48.31  Aligned_cols=35  Identities=26%  Similarity=0.209  Sum_probs=30.2

Q ss_pred             chhhhHHHHHHHHHhHhhHHHHHHHHHHHHHHhhc
Q 027569          186 NAFEKSIERRLRRKIKNRESAARSRARKQVAYNCS  220 (221)
Q Consensus       186 ~~~~~~~~rr~~R~~kNResa~rsR~rKq~~~~e~  220 (221)
                      ...+...-+..||-.|||++|+++|.||.+.+.||
T Consensus        29 s~~e~~~lK~~RR~lKNR~yAq~CR~rk~~~~~~L   63 (107)
T 3a5t_A           29 SKEEIIQLKQRRRTLKNRGYAASCRVKRVTQKEEL   63 (107)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHH
Confidence            45566667899999999999999999999988776

>1ci6_A Transcription factor ATF-4; BZIP; 2.60A {Homo sapiens} SCOP: h.1.3.1

Probab=95.45  E-value=0.0058  Score=43.16  Aligned_cols=27  Identities=22%  Similarity=0.434  Sum_probs=19.8

Q ss_pred             HHHHHHhHhhHHHHHHHHHHHHHHhhc
Q 027569          194 RRLRRKIKNRESAARSRARKQVAYNCS  220 (221)
Q Consensus       194 rr~~R~~kNResa~rsR~rKq~~~~e~  220 (221)
                      +|.+++..||..|+|+|.||++++.+|
T Consensus         2 k~~rKr~rNr~AA~R~R~KKk~~~~~l   28 (63)
T 1ci6_A            2 KKLKKMEQNKTAATRYRQKKRAEQEAL   28 (63)
T ss_dssp             ------CCHHHHHHHHHHHHHHHHHHH
T ss_pred             chHhHHHHhHHHHHHHHHHHHHHHHHH
Confidence            578899999999999999999998876

>1gd2_E Transcription factor PAP1; basic leucine zipper, protein-DNA complex, transcription/DNA complex; HET: DNA; 2.00A {Schizosaccharomyces pombe} SCOP: h.1.3.1

Probab=94.38  E-value=0.03  Score=40.65  Aligned_cols=26  Identities=27%  Similarity=0.307  Sum_probs=23.5

Q ss_pred             HHHHHhHhhHHHHHHHHHHHHHHhhc
Q 027569          195 RLRRKIKNRESAARSRARKQVAYNCS  220 (221)
Q Consensus       195 r~~R~~kNResa~rsR~rKq~~~~e~  220 (221)
                      ..||...||++++..|.||++|+.+|
T Consensus         9 ~~kR~~qNR~AQRafReRK~~~i~~L   34 (70)
T 1gd2_E            9 SSKRKAQNRAAQRAFRKRKEDHLKAL   34 (70)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            35788999999999999999999876

>1gu4_A CAAT/enhancer binding protein beta; transcription/DNA, protein-DNA complex, transcription factor, BZIP, C/EBP; 1.80A {Homo sapiens} SCOP: h.1.3.1 PDB: 1gtw_A 1gu5_A 1h88_A 1h8a_A 1io4_A 2e43_A* 2e42_A* 1h89_A 1ci6_B 1nwq_A

Probab=89.51  E-value=0.23  Score=36.61  Aligned_cols=32  Identities=16%  Similarity=0.193  Sum_probs=23.0

Q ss_pred             hhHHHHHHHHHhHhhHHHHHHHHHHHHHHhhc
Q 027569          189 EKSIERRLRRKIKNRESAARSRARKQVAYNCS  220 (221)
Q Consensus       189 ~~~~~rr~~R~~kNResa~rsR~rKq~~~~e~  220 (221)
                      |+.++....|-.+|.+.|+|||.++++...|+
T Consensus        10 dk~d~~Y~~rR~rNN~AakrSR~krk~r~~e~   41 (78)
T 1gu4_A           10 DKHSDEYKIRRERNNIAVRKSRDKAKMRNLET   41 (78)
T ss_dssp             CTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             ccCcHHHHHHHHHhHHHHHHHHHHHHHHHHHH
Confidence            34434344445799999999999998876654

>1hjb_A Ccaat/enhancer binding protein beta; transcription/DNA, protein-DNA complex; HET: DNA; 3.0A {Homo sapiens} SCOP: h.1.3.1

Probab=86.13  E-value=0.5  Score=35.49  Aligned_cols=33  Identities=15%  Similarity=0.188  Sum_probs=24.3

Q ss_pred             hhhHHHHHHHHHhHhhHHHHHHHHHHHHHHhhc
Q 027569          188 FEKSIERRLRRKIKNRESAARSRARKQVAYNCS  220 (221)
Q Consensus       188 ~~~~~~rr~~R~~kNResa~rsR~rKq~~~~e~  220 (221)
                      +|+.++....|-.+|.+.|+|||.++++...|+
T Consensus         9 ~dk~d~~Y~~rR~rNN~AarrSR~krk~r~~e~   41 (87)
T 1hjb_A            9 VDKHSDEYKIRRERNNIAVRKSRDKAKMRNLET   41 (87)
T ss_dssp             -CTTSHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             cCcccHHHHHHHHHhHHHHHHHHHHHHHHHHHH
Confidence            344445555556799999999999998877654

>1skn_P DNA-binding domain of SKN-1; complex (transcription factor/DNA), transcription/DNA complex; HET: DNA LDA; 2.50A {Caenorhabditis elegans} SCOP: a.37.1.1

Probab=82.94  E-value=1.5  Score=33.36  Aligned_cols=38  Identities=21%  Similarity=0.354  Sum_probs=31.5

Q ss_pred             CCcchhhhHHHHHHHHHhHhhHHHHHHHHHHHHHHhhc
Q 027569          183 RDDNAFEKSIERRLRRKIKNRESAARSRARKQVAYNCS  220 (221)
Q Consensus       183 R~~~~~~~~~~rr~~R~~kNResa~rsR~rKq~~~~e~  220 (221)
                      +..........|..||-.|||.-|.+.|.||-+.+.+|
T Consensus        51 ~~Ls~~Ql~~ir~~RRR~KNr~AA~~CRkrK~~~~d~l   88 (92)
T 1skn_P           51 ESLSEYQRQLIRKIRRRGKNKVAARTCRQRRTDRHDKM   88 (92)
T ss_dssp             SCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTC
T ss_pred             CCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhh
Confidence            44455667778889999999999999999999988765

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00