Citrus Sinensis ID: 027629

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-
MYQVPTGWKFFGNLMDAGLCSICGEESFGTGSDHIREKDGIWAVLAWLSILAHKNKENLDGGKLVTVEDIVRKHWATYGRHYYTRYDYENVDAGAAKELMANLVKMQSSLPEVNDIVKGICSDVSKVVNADEFEYKDPVDGSISKHQGIRYLFEDGSRLVFRLSGTGSEGATIRLYIEQYEKDPSKTGRDSQEALAPLVEVALKLSKMEQFTGRSAPTVIT
cccccccHHHHHHHHHcccEEEEEcccccccccccccHHHHHHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHccccccccccccccHHHHHHHHHHHHHHHcccccccccccccccccEEEEEcccccccccccccccccccEEEEEEcccEEEEEEccccccccEEEEEEEEcccccccccccHHHHHHHHHHHHHHHHccHHHHccccccccc
EEEEccccHHHHHHHHcccccEEEEcccEEEEcccccccHHHHHHHHHHHHHHHccHcccccccccHHHHHHHHHHHHcEEEEEEEEEEEEcHHHHHHHHHHHHHHHccccccccEEEcccccEEEEEEEEEccEEccccccEEccccEEEEEccccEEEEEEEEccccEEEEEEEEEEEEcccccccccHHHHHHHHHHHHHHHHcHHHHHccccccEEc
myqvptgwkffgnlmdaglcsicgeesfgtgsdhirekDGIWAVLAWLSILAHKnkenldggklvtVEDIVRKHWATYGRhyytrydyenvdAGAAKELMANLVKMQsslpevndIVKGICSDvskvvnadefeykdpvdgsiskhqGIRYLFEDGSRLVfrlsgtgsegATIRLYIEQyekdpsktgrdsqEALAPLVEVALKLSKmeqftgrsaptvit
MYQVPTGWKFFGNLMDAGLCSICGEESFGTGSDHIREKDGIWAVLAWLSILAHknkenldggklvtvediVRKHWATYGRHYYTRYDYENVDAGAAKELMANLVKMQSSLPEVNDIVKGICSDVSKVVNADEfeykdpvdgsiskHQGIRYLFEDGSRLVFRlsgtgsegatIRLYIEQYEKdpsktgrdsqEALAPLVEVALKlskmeqftgrsaptvit
MYQVPTGWKFFGNLMDAGLCSICGEESFGTGSDHIREKDGIWAVLAWLSILAHKNKENLDGGKLVTVEDIVRKHWATYGRHYYTRYDYENVDAGAAKELMANLVKMQSSLPEVNDIVKGICSDVSKVVNADEFEYKDPVDGSISKHQGIRYLFEDGSRLVFRLSGTGSEGATIRLYIEQYEKDPSKTGRDSQEALAPLVEVALKLSKMEQFTGRSAPTVIT
***VPTGWKFFGNLMDAGLCSICGEESFGTGSDHIREKDGIWAVLAWLSILAHKNKENLDGGKLVTVEDIVRKHWATYGRHYYTRYDYENVDAGAAKELMANLVKMQSSLPEVNDIVKGICSDVSKVVNADEFEYKDPVDGSISKHQGIRYLFEDGSRLVFRLSGTGSEGATIRLYIEQY*****************************************
MYQVPTGWKFFGNLMDAGLCSICGEESFGTGSDHIREKDGIWAVLAWLSILAHKNKENLDGGKLVTVEDIVRKHWATYGRHYYTRYDYENVDAGAAKELMANLVKMQSSLPEVNDIVKGICSDVSKVVNADEFEYKDPVDGSISKHQGIRYLFEDGSRLVFRLSGTGSEGATIRLYIEQYE*******RDSQEALAPLVEVALKLSKMEQFTGRSAPTVI*
MYQVPTGWKFFGNLMDAGLCSICGEESFGTGSDHIREKDGIWAVLAWLSILAHKNKENLDGGKLVTVEDIVRKHWATYGRHYYTRYDYENVDAGAAKELMANLVKMQSSLPEVNDIVKGICSDVSKVVNADEFEYKDPVDGSISKHQGIRYLFEDGSRLVFRLSGTGSEGATIRLYIEQYEK**********EALAPLVEVALKLSKMEQF**********
MYQVPTGWKFFGNLMDAGLCSICGEESFGTGSDHIREKDGIWAVLAWLSILAHKNKENLDGGKLVTVEDIVRKHWATYGRHYYTRYDYENVDAGAAKELMANLVKMQSSLPEVNDIVKGICSDVSKVVNADEFEYKDPVDGSISKHQGIRYLFEDGSRLVFRLSGTGSEGATIRLYIEQYEKDPSKTGRDSQEALAPLVEVALKLSKMEQFTGRSAPTVIT
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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oooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MYQVPTGWKFFGNLMDAGLCSICGEESFGTGSDHIREKDGIWAVLAWLSILAHKNKENLDGGKLVTVEDIVRKHWATYGRHYYTRYDYENVDAGAAKELMANLVKMQSSLPEVNDIVKGICSDVSKVVNADEFEYKDPVDGSISKHQGIRYLFEDGSRLVFRLSGTGSEGATIRLYIEQYEKDPSKTGRDSQEALAPLVEVALKLSKMEQFTGRSAPTVIT
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query221 2.2.26 [Sep-21-2011]
Q9ZSQ4582 Phosphoglucomutase, cytop N/A no 1.0 0.379 0.900 1e-117
O49299583 Probable phosphoglucomuta yes no 1.0 0.379 0.869 1e-114
Q9SM60582 Phosphoglucomutase, cytop N/A no 0.995 0.378 0.873 1e-113
P93805583 Phosphoglucomutase, cytop N/A no 1.0 0.379 0.868 1e-113
Q9SGC1585 Probable phosphoglucomuta no no 1.0 0.377 0.860 1e-113
P93804583 Phosphoglucomutase, cytop N/A no 1.0 0.379 0.864 1e-112
P93262583 Phosphoglucomutase, cytop N/A no 1.0 0.379 0.841 1e-111
Q9M4G4583 Phosphoglucomutase, cytop N/A no 1.0 0.379 0.850 1e-111
Q9SNX2581 Phosphoglucomutase, cytop N/A no 1.0 0.380 0.809 1e-106
Q9SCY0623 Phosphoglucomutase, chlor no no 0.972 0.345 0.583 1e-73
>sp|Q9ZSQ4|PGMC_POPTN Phosphoglucomutase, cytoplasmic OS=Populus tremula GN=PGM1 PE=2 SV=1 Back     alignment and function desciption
 Score =  419 bits (1078), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 199/221 (90%), Positives = 210/221 (95%)

Query: 1   MYQVPTGWKFFGNLMDAGLCSICGEESFGTGSDHIREKDGIWAVLAWLSILAHKNKENLD 60
            ++VPTGWKFFGNLMDAGLCS+CGEESFGTGSDHIREKDGIWAVLAWLSILA+KN+ENL 
Sbjct: 362 FFEVPTGWKFFGNLMDAGLCSVCGEESFGTGSDHIREKDGIWAVLAWLSILAYKNRENLG 421

Query: 61  GGKLVTVEDIVRKHWATYGRHYYTRYDYENVDAGAAKELMANLVKMQSSLPEVNDIVKGI 120
           GGKLVTVEDIV  HWATYGRHYYTRYDYENVDAGAAKELMA LVK+QSSL EVN+IV GI
Sbjct: 422 GGKLVTVEDIVHNHWATYGRHYYTRYDYENVDAGAAKELMACLVKLQSSLTEVNEIVSGI 481

Query: 121 CSDVSKVVNADEFEYKDPVDGSISKHQGIRYLFEDGSRLVFRLSGTGSEGATIRLYIEQY 180
            SDVSKVV+ADEFEYKDPVDGSISKHQGIRYLFEDGSRLVFRLSGTGSEGATIRLYIEQY
Sbjct: 482 QSDVSKVVHADEFEYKDPVDGSISKHQGIRYLFEDGSRLVFRLSGTGSEGATIRLYIEQY 541

Query: 181 EKDPSKTGRDSQEALAPLVEVALKLSKMEQFTGRSAPTVIT 221
           EKDPSKTGRDSQ+ALAPLV VAL L KM++FTGRSAPTVIT
Sbjct: 542 EKDPSKTGRDSQDALAPLVAVALGLXKMQEFTGRSAPTVIT 582
This enzyme participates in both the breakdown and synthesis of glucose.
Populus tremula (taxid: 113636)
EC: 5EC: .EC: 4EC: .EC: 2EC: .EC: 2
>sp|O49299|PGMC1_ARATH Probable phosphoglucomutase, cytoplasmic 1 OS=Arabidopsis thaliana GN=At1g23190 PE=1 SV=2 Back     alignment and function description
>sp|Q9SM60|PGMC_PEA Phosphoglucomutase, cytoplasmic OS=Pisum sativum GN=PGM1 PE=2 SV=1 Back     alignment and function description
>sp|P93805|PGMC2_MAIZE Phosphoglucomutase, cytoplasmic 2 OS=Zea mays PE=2 SV=2 Back     alignment and function description
>sp|Q9SGC1|PGMC2_ARATH Probable phosphoglucomutase, cytoplasmic 2 OS=Arabidopsis thaliana GN=At1g70730 PE=1 SV=1 Back     alignment and function description
>sp|P93804|PGMC1_MAIZE Phosphoglucomutase, cytoplasmic 1 OS=Zea mays PE=2 SV=2 Back     alignment and function description
>sp|P93262|PGMC_MESCR Phosphoglucomutase, cytoplasmic OS=Mesembryanthemum crystallinum GN=PGM1 PE=2 SV=1 Back     alignment and function description
>sp|Q9M4G4|PGMC_SOLTU Phosphoglucomutase, cytoplasmic OS=Solanum tuberosum GN=PGM1 PE=2 SV=1 Back     alignment and function description
>sp|Q9SNX2|PGMC_BROIN Phosphoglucomutase, cytoplasmic OS=Bromus inermis GN=PGM1 PE=2 SV=1 Back     alignment and function description
>sp|Q9SCY0|PGMP_ARATH Phosphoglucomutase, chloroplastic OS=Arabidopsis thaliana GN=PGMP PE=1 SV=2 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query221
449464800 582 PREDICTED: phosphoglucomutase, cytoplasm 1.0 0.379 0.904 1e-117
255573724 581 phosphoglucomutase, putative [Ricinus co 1.0 0.380 0.909 1e-116
449521756 582 PREDICTED: LOW QUALITY PROTEIN: phosphog 1.0 0.379 0.900 1e-116
224111476 582 predicted protein [Populus trichocarpa] 1.0 0.379 0.909 1e-115
12585330 582 RecName: Full=Phosphoglucomutase, cytopl 1.0 0.379 0.900 1e-115
224099523 582 predicted protein [Populus trichocarpa] 1.0 0.379 0.904 1e-115
225424316 583 PREDICTED: phosphoglucomutase, cytoplasm 1.0 0.379 0.891 1e-115
40233152 582 cytosolic phosphoglucomutase [Populus to 1.0 0.379 0.900 1e-114
312283307 582 unnamed protein product [Thellungiella h 1.0 0.379 0.869 1e-113
2829893 582 phosphoglucomutase [Arabidopsis thaliana 1.0 0.379 0.869 1e-112
>gi|449464800|ref|XP_004150117.1| PREDICTED: phosphoglucomutase, cytoplasmic-like [Cucumis sativus] Back     alignment and taxonomy information
 Score =  425 bits (1093), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 200/221 (90%), Positives = 213/221 (96%)

Query: 1   MYQVPTGWKFFGNLMDAGLCSICGEESFGTGSDHIREKDGIWAVLAWLSILAHKNKENLD 60
            ++VPTGWKFFGNLMDAG+CS+CGEESFGTGSDHIREKDGIWAVLAWLSILA+KNK NLD
Sbjct: 362 FFEVPTGWKFFGNLMDAGMCSVCGEESFGTGSDHIREKDGIWAVLAWLSILAYKNKGNLD 421

Query: 61  GGKLVTVEDIVRKHWATYGRHYYTRYDYENVDAGAAKELMANLVKMQSSLPEVNDIVKGI 120
           GGKLV+VEDIVR+HWATYGRHYYTRYDYENVDAGAAKELM NLVK+QSSL EVN I+KGI
Sbjct: 422 GGKLVSVEDIVRQHWATYGRHYYTRYDYENVDAGAAKELMENLVKLQSSLAEVNGIIKGI 481

Query: 121 CSDVSKVVNADEFEYKDPVDGSISKHQGIRYLFEDGSRLVFRLSGTGSEGATIRLYIEQY 180
            SDVSKVV+ DEFEYKDPVDGSISKHQGIRYLFEDGSRLVFRLSGTGSEGATIRLYIEQY
Sbjct: 482 RSDVSKVVHGDEFEYKDPVDGSISKHQGIRYLFEDGSRLVFRLSGTGSEGATIRLYIEQY 541

Query: 181 EKDPSKTGRDSQEALAPLVEVALKLSKMEQFTGRSAPTVIT 221
           EKDPSK GRDSQEALAPLVEVALKLSKM++FTGRS+PTVIT
Sbjct: 542 EKDPSKIGRDSQEALAPLVEVALKLSKMQEFTGRSSPTVIT 582

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|255573724|ref|XP_002527783.1| phosphoglucomutase, putative [Ricinus communis] gi|223532818|gb|EEF34593.1| phosphoglucomutase, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|449521756|ref|XP_004167895.1| PREDICTED: LOW QUALITY PROTEIN: phosphoglucomutase, cytoplasmic-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|224111476|ref|XP_002315869.1| predicted protein [Populus trichocarpa] gi|222864909|gb|EEF02040.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|12585330|sp|Q9ZSQ4.1|PGMC_POPTN RecName: Full=Phosphoglucomutase, cytoplasmic; Short=PGM; AltName: Full=Glucose phosphomutase gi|4234941|gb|AAD13031.1| cytosolic phosphoglucomutase [Populus tremula x Populus tremuloides] Back     alignment and taxonomy information
>gi|224099523|ref|XP_002311517.1| predicted protein [Populus trichocarpa] gi|222851337|gb|EEE88884.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|225424316|ref|XP_002284729.1| PREDICTED: phosphoglucomutase, cytoplasmic [Vitis vinifera] gi|297737663|emb|CBI26864.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|40233152|gb|AAR83345.1| cytosolic phosphoglucomutase [Populus tomentosa] Back     alignment and taxonomy information
>gi|312283307|dbj|BAJ34519.1| unnamed protein product [Thellungiella halophila] Back     alignment and taxonomy information
>gi|2829893|gb|AAC00601.1| phosphoglucomutase [Arabidopsis thaliana] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query221
TAIR|locus:2028110583 PGM3 "phosphoglucomutase 3" [A 0.995 0.377 0.873 6.7e-104
TAIR|locus:2033583662 PGM2 "phosphoglucomutase 2" [A 0.995 0.332 0.864 2.6e-102
TAIR|locus:2165351623 PGM "phosphoglucomutase" [Arab 0.968 0.343 0.586 2.1e-68
UNIPROTKB|Q33AE4609 Os10g0189100 "cDNA clone:J0130 0.963 0.349 0.601 5.6e-68
UNIPROTKB|A8J8Z1600 GPM1a "Phosphoglucomutase" [Ch 0.968 0.356 0.568 6.5e-67
ZFIN|ZDB-GENE-040426-1245561 pgm1 "phosphoglucomutase 1" [D 0.945 0.372 0.587 7.4e-66
DICTYBASE|DDB_G0288483572 pgmA "phosphoglucomutase A" [D 0.990 0.382 0.527 5.2e-65
UNIPROTKB|F1NCA6591 PGM1 "Uncharacterized protein" 0.954 0.357 0.579 6.7e-65
UNIPROTKB|P36871562 PGM1 "Phosphoglucomutase-1" [H 0.954 0.375 0.583 6.7e-65
UNIPROTKB|Q499Q4562 Pgm1 "Phosphoglucomutase 1" [R 0.954 0.375 0.579 8.5e-65
TAIR|locus:2028110 PGM3 "phosphoglucomutase 3" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1029 (367.3 bits), Expect = 6.7e-104, P = 6.7e-104
 Identities = 193/221 (87%), Positives = 211/221 (95%)

Query:     2 YQVPTGWKFFGNLMDAGLCSICGEESFGTGSDHIREKDGIWAVLAWLSILAHKNKENLDG 61
             ++VPTGWKFFGNLMDAG+CS+CGEESFGTGSDHIREKDGIWAVLAW+SILAHKNK N+DG
Sbjct:   363 FEVPTGWKFFGNLMDAGMCSVCGEESFGTGSDHIREKDGIWAVLAWMSILAHKNKGNIDG 422

Query:    62 G-KLVTVEDIVRKHWATYGRHYYTRYDYENVDAGAAKELMANLVKMQSSLPEVNDIVKGI 120
               KLV+VEDIVR+HWATYGRHYYTRYDYENVDAG AKELM +LVK+QSS+PEVN IVKGI
Sbjct:   423 NAKLVSVEDIVRQHWATYGRHYYTRYDYENVDAGKAKELMEHLVKLQSSIPEVNKIVKGI 482

Query:   121 CSDVSKVVNADEFEYKDPVDGSISKHQGIRYLFEDGSRLVFRLSGTGSEGATIRLYIEQY 180
              SDV+ V +ADEFEYKDPVDGSISKHQGIRYLFEDGSRLVFRLSGTGSEGATIRLYIEQY
Sbjct:   483 RSDVASVASADEFEYKDPVDGSISKHQGIRYLFEDGSRLVFRLSGTGSEGATIRLYIEQY 542

Query:   181 EKDPSKTGRDSQEALAPLVEVALKLSKMEQFTGRSAPTVIT 221
             EKD SKTGR+SQEAL+PLV++ALKLSKME+FTGRSAPTVIT
Sbjct:   543 EKDASKTGRESQEALSPLVDLALKLSKMEEFTGRSAPTVIT 583
GO:0000287 "magnesium ion binding" evidence=IEA
GO:0004614 "phosphoglucomutase activity" evidence=ISS;IDA
GO:0005737 "cytoplasm" evidence=ISM;IDA
GO:0005975 "carbohydrate metabolic process" evidence=IEA;ISS;IDA
GO:0005992 "trehalose biosynthetic process" evidence=IBA
GO:0006874 "cellular calcium ion homeostasis" evidence=IBA
GO:0009570 "chloroplast stroma" evidence=IBA
GO:0009590 "detection of gravity" evidence=IBA
GO:0010319 "stromule" evidence=IBA
GO:0016868 "intramolecular transferase activity, phosphotransferases" evidence=IEA
GO:0019252 "starch biosynthetic process" evidence=IBA
GO:0019255 "glucose 1-phosphate metabolic process" evidence=IBA
GO:0019388 "galactose catabolic process" evidence=IBA
GO:0009507 "chloroplast" evidence=IDA
GO:0046686 "response to cadmium ion" evidence=IEP;RCA
GO:0005886 "plasma membrane" evidence=IDA
GO:0005634 "nucleus" evidence=IDA
GO:0005829 "cytosol" evidence=IDA
GO:0048229 "gametophyte development" evidence=IGI
GO:0006094 "gluconeogenesis" evidence=RCA
GO:0006096 "glycolysis" evidence=RCA
GO:0009651 "response to salt stress" evidence=RCA
TAIR|locus:2033583 PGM2 "phosphoglucomutase 2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2165351 PGM "phosphoglucomutase" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
UNIPROTKB|Q33AE4 Os10g0189100 "cDNA clone:J013000K21, full insert sequence" [Oryza sativa Japonica Group (taxid:39947)] Back     alignment and assigned GO terms
UNIPROTKB|A8J8Z1 GPM1a "Phosphoglucomutase" [Chlamydomonas reinhardtii (taxid:3055)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-040426-1245 pgm1 "phosphoglucomutase 1" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
DICTYBASE|DDB_G0288483 pgmA "phosphoglucomutase A" [Dictyostelium discoideum (taxid:44689)] Back     alignment and assigned GO terms
UNIPROTKB|F1NCA6 PGM1 "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
UNIPROTKB|P36871 PGM1 "Phosphoglucomutase-1" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|Q499Q4 Pgm1 "Phosphoglucomutase 1" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
O49299PGMC1_ARATH5, ., 4, ., 2, ., 20.86931.00.3790yesno
Q9ZSQ4PGMC_POPTN5, ., 4, ., 2, ., 20.90041.00.3797N/Ano

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer5.4.20.766

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
estExt_fgenesh4_pg.C_LG_X0989
phosphoglucomutase (EC-5.4.2.2) (582 aa)
(Populus trichocarpa)
Predicted Functional Partners:
gw1.VIII.2574.1
glucose-6-phosphate isomerase (EC-5.3.1.9) (569 aa)
•  • •• 0.942
eugene3.00440223
UTP--glucose-1-phosphate uridylyltransferase (EC-2.7.7.9) (469 aa)
   • •• 0.920
gw1.II.3030.1
glucose-6-phosphate isomerase (EC-5.3.1.9) (542 aa)
     •• 0.914
estExt_fgenesh4_pg.C_LG_IX1158
hypothetical protein; Phosphorylase is an important allosteric enzyme in carbohydrate metabolis [...] (853 aa)
   • •• 0.912
estExt_Genewise1_v1.C_LG_IV2986
hypothetical protein; Phosphorylase is an important allosteric enzyme in carbohydrate metabolis [...] (819 aa)
•  • •• 0.911
fgenesh4_pm.C_LG_XIV000240
glucose-1-phosphate adenylyltransferase (EC-2.7.7.27); This protein plays a role in synthesis o [...] (445 aa)
     •• 0.907
gw1.V.1420.1
glucose-1-phosphate adenylyltransferase (EC-2.7.7.27); This protein plays a role in synthesis o [...] (475 aa)
     •• 0.907
eugene3.00141188
RecName- Full=Glucose-1-phosphate adenylyltransferase; EC=2.7.7.27;; This protein plays a role [...] (523 aa)
     •• 0.906
estExt_fgenesh4_pm.C_LG_II0158
glucose-1-phosphate adenylyltransferase (EC-2.7.7.27); This protein plays a role in synthesis o [...] (528 aa)
     •• 0.905
estExt_Genewise1_v1.C_LG_VIII1252
glucose-1-phosphate adenylyltransferase (EC-2.7.7.27); This protein plays a role in synthesis o [...] (528 aa)
     •• 0.905

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query221
PLN02307579 PLN02307, PLN02307, phosphoglucomutase 1e-155
cd03085548 cd03085, PGM1, Phosphoglucomutase 1 (PGM1) catalyz 1e-141
COG0033524 COG0033, Pgm, Phosphoglucomutase [Carbohydrate tra 7e-61
PRK07564543 PRK07564, PRK07564, phosphoglucomutase; Validated 4e-57
pfam02880112 pfam02880, PGM_PMM_III, Phosphoglucomutase/phospho 4e-17
cd05800461 cd05800, PGM_like2, This PGM-like (phosphoglucomut 8e-14
cd03084355 cd03084, phosphohexomutase, The alpha-D-phosphohex 1e-13
cd05799487 cd05799, PGM2, This CD includes PGM2 (phosphogluco 5e-08
pfam0040871 pfam00408, PGM_PMM_IV, Phosphoglucomutase/phosphom 6e-07
COG1109464 COG1109, {ManB}, Phosphomannomutase [Carbohydrate 6e-07
>gnl|CDD|177942 PLN02307, PLN02307, phosphoglucomutase Back     alignment and domain information 
 Score =  442 bits (1139), Expect = e-155
 Identities = 163/220 (74%), Positives = 186/220 (84%), Gaps = 6/220 (2%)

Query: 2   YQVPTGWKFFGNLMDAGLCSICGEESFGTGSDHIREKDGIWAVLAWLSILAHKNKENLDG 61
           ++VPTGWKFFGNLMDAG  SICGEESFGTGSDHIREKDGIWAVLAWLSILAHKNK+ L G
Sbjct: 366 FEVPTGWKFFGNLMDAGKLSICGEESFGTGSDHIREKDGIWAVLAWLSILAHKNKDVLPG 425

Query: 62  GKLVTVEDIVRKHWATYGRHYYTRYDYENVDAGAAKELMANLVKMQSSLPEVNDIVKGIC 121
           GKLVTVEDIVR+HWATYGR++Y+RYDYENVD+ AA ++M +L         VN   KGI 
Sbjct: 426 GKLVTVEDIVREHWATYGRNFYSRYDYENVDSEAANKMMDHLRD------LVNKSKKGIK 479

Query: 122 SDVSKVVNADEFEYKDPVDGSISKHQGIRYLFEDGSRLVFRLSGTGSEGATIRLYIEQYE 181
             V  +  AD+FEY DPVDGS+S  QGIR+LF DGSR++FRLSGTGS GATIRLYIEQYE
Sbjct: 480 YGVYTLAFADDFEYTDPVDGSVSSKQGIRFLFTDGSRIIFRLSGTGSAGATIRLYIEQYE 539

Query: 182 KDPSKTGRDSQEALAPLVEVALKLSKMEQFTGRSAPTVIT 221
           KDPSK GRD+QEAL PL++VALKLSK+++FTGRS PTVIT
Sbjct: 540 KDPSKHGRDAQEALKPLIDVALKLSKLKEFTGRSKPTVIT 579

Length = 579
>gnl|CDD|100087 cd03085, PGM1, Phosphoglucomutase 1 (PGM1) catalyzes the bidirectional interconversion of glucose-1-phosphate (G-1-P) and glucose-6-phosphate (G-6-P) via a glucose 1,6-diphosphate intermediate, an important metabolic step in prokaryotes and eukaryotes Back     alignment and domain information
>gnl|CDD|223111 COG0033, Pgm, Phosphoglucomutase [Carbohydrate transport and metabolism] Back     alignment and domain information
>gnl|CDD|236050 PRK07564, PRK07564, phosphoglucomutase; Validated Back     alignment and domain information
>gnl|CDD|217265 pfam02880, PGM_PMM_III, Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III Back     alignment and domain information
>gnl|CDD|100093 cd05800, PGM_like2, This PGM-like (phosphoglucomutase-like) protein of unknown function belongs to the alpha-D-phosphohexomutase superfamily and is found in both archaea and bacteria Back     alignment and domain information
>gnl|CDD|100086 cd03084, phosphohexomutase, The alpha-D-phosphohexomutase superfamily includes several related enzymes that catalyze a reversible intramolecular phosphoryl transfer on their sugar substrates Back     alignment and domain information
>gnl|CDD|100092 cd05799, PGM2, This CD includes PGM2 (phosphoglucomutase 2) and PGM2L1 (phosphoglucomutase 2-like 1) Back     alignment and domain information
>gnl|CDD|215905 pfam00408, PGM_PMM_IV, Phosphoglucomutase/phosphomannomutase, C-terminal domain Back     alignment and domain information
>gnl|CDD|224034 COG1109, {ManB}, Phosphomannomutase [Carbohydrate transport and metabolism] Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 221
PLN02307579 phosphoglucomutase 100.0
KOG0625558 consensus Phosphoglucomutase [Carbohydrate transpo 100.0
cd03085548 PGM1 Phosphoglucomutase 1 (PGM1) catalyzes the bid 100.0
PTZ00150584 phosphoglucomutase-2-like protein; Provisional 100.0
cd05801522 PGM_like3 This bacterial PGM-like (phosphoglucomut 99.97
cd05800461 PGM_like2 This PGM-like (phosphoglucomutase-like) 99.97
TIGR01132543 pgm phosphoglucomutase, alpha-D-glucose phosphate- 99.97
PRK07564543 phosphoglucomutase; Validated 99.96
cd03089443 PMM_PGM The phosphomannomutase/phosphoglucomutase 99.96
cd05799487 PGM2 This CD includes PGM2 (phosphoglucomutase 2) 99.95
cd05805441 MPG1_transferase GTP-mannose-1-phosphate guanyltra 99.95
PRK09542445 manB phosphomannomutase/phosphoglucomutase; Review 99.95
PRK14321449 glmM phosphoglucosamine mutase; Provisional 99.95
PRK15414456 phosphomannomutase CpsG; Provisional 99.95
cd05803445 PGM_like4 This PGM-like (phosphoglucomutase-like) 99.95
COG1109464 {ManB} Phosphomannomutase [Carbohydrate transport 99.95
cd03088459 ManB ManB is a bacterial phosphomannomutase (PMM) 99.94
cd03087439 PGM_like1 This archaeal PGM-like (phosphoglucomuta 99.94
COG0033524 Pgm Phosphoglucomutase [Carbohydrate transport and 99.93
KOG1220607 consensus Phosphoglucomutase/phosphomannomutase [C 99.93
PRK14324446 glmM phosphoglucosamine mutase; Provisional 99.92
PLN02371583 phosphoglucosamine mutase family protein 99.91
PRK14317465 glmM phosphoglucosamine mutase; Provisional 99.91
PRK14315448 glmM phosphoglucosamine mutase; Provisional 99.91
PRK14323440 glmM phosphoglucosamine mutase; Provisional 99.91
PRK10887443 glmM phosphoglucosamine mutase; Provisional 99.9
PRK14320443 glmM phosphoglucosamine mutase; Provisional 99.9
TIGR01455443 glmM phosphoglucosamine mutase. This model describ 99.9
PRK14314450 glmM phosphoglucosamine mutase; Provisional 99.9
PRK14316448 glmM phosphoglucosamine mutase; Provisional 99.9
PRK14322429 glmM phosphoglucosamine mutase; Provisional 99.89
cd05802434 GlmM GlmM is a bacterial phosphoglucosamine mutase 99.89
PRK14319430 glmM phosphoglucosamine mutase; Provisional 99.88
cd03086513 PGM3 PGM3 (phosphoglucomutase 3), also known as PA 99.88
PRK14318448 glmM phosphoglucosamine mutase; Provisional 99.88
cd03084355 phosphohexomutase The alpha-D-phosphohexomutase su 99.87
PTZ00302585 N-acetylglucosamine-phosphate mutase; Provisional 99.79
PF02880113 PGM_PMM_III: Phosphoglucomutase/phosphomannomutase 99.78
PLN02895562 phosphoacetylglucosamine mutase 99.77
PF0040873 PGM_PMM_IV: Phosphoglucomutase/phosphomannomutase, 99.43
KOG2537539 consensus Phosphoglucomutase/phosphomannomutase [C 97.31
>PLN02307 phosphoglucomutase Back     alignment and domain information 
Probab=100.00  E-value=2.9e-45  Score=352.83  Aligned_cols=213  Identities=74%  Similarity=1.203  Sum_probs=177.0

Q ss_pred             CeEeccchHHHHHhHhcCCcEEEeccCCCccCCCCCCCcHHHHHHHHHHHHHHhcccCCCCCCccCHHHHHHHHHHhhCC
Q 027629            1 MYQVPTGWKFFGNLMDAGLCSICGEESFGTGSDHIREKDGIWAVLAWLSILAHKNKENLDGGKLVTVEDIVRKHWATYGR   80 (221)
Q Consensus         1 ~~~t~tGfk~I~~~m~~~~~~~GgEESgG~~~~~~~dkDGi~aal~~lel~a~~~~~~~~~~~~~tL~ell~~l~~~yg~   80 (221)
                      +++|+||||||+++|.+++++||||||||++++|++|||||+||+++++|+++++++..-|+|++||.++|++||++||+
T Consensus       365 ~~~t~vGfk~I~~~m~e~~~~~GgEeSgG~~~~~~~dkDGi~aallllel~a~~~~~~~~~~~~~tl~~~l~el~~~~G~  444 (579)
T PLN02307        365 FFEVPTGWKFFGNLMDAGKLSICGEESFGTGSDHIREKDGIWAVLAWLSILAHKNKDVLPGGKLVTVEDIVREHWATYGR  444 (579)
T ss_pred             EEEcCchHHHHHHHHHhCCcEEEEcccCCCCCCCCCCCcHHHHHHHHHHHHHHhCCCcccccCcCCHHHHHHHHHHHhCC
Confidence            57999999999999999999999999999988899999999999999999999887422234556999999999999999


Q ss_pred             ceeeeeeeEecChhHHHHHHHHHHHhhcCCCc--ccccccCccccccceeeeccccccCCCCCCCCCCCeEEEEEcCCeE
Q 027629           81 HYYTRYDYENVDAGAAKELMANLVKMQSSLPE--VNDIVKGICSDVSKVVNADEFEYKDPVDGSISKHQGIRYLFEDGSR  158 (221)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~p~--~~~~~~g~~i~~~~v~~~~d~~~~d~~~g~~~~~Dgl~~~~~dg~w  158 (221)
                      |++.+.++.+++.+...++++.|++   .+|.  ..+.+.+.     +|..+.||.+.++.++.+++.||++|.|+||+|
T Consensus       445 ~~~~~~~~~~~~~~~~~~~~~~lr~---~~~~~~~~~~~~~~-----~v~~~~d~~~~~~~~~~~~~~dglk~~~~dg~w  516 (579)
T PLN02307        445 NFYSRYDYENVDSEAANKMMDHLRD---LVNKSKKGIKYGVY-----TLAFADDFEYTDPVDGSVSSKQGIRFLFTDGSR  516 (579)
T ss_pred             CeeeecceecCCHHHHHHHHHHHhc---ccccccCCCEecce-----EEEEEeeceeecCCCCCCCccCeEEEEEcCCeE
Confidence            9999998887655555566665543   2221  11244444     677778887655566678899999999999999


Q ss_pred             EEEecCCCCCCCCeEEEEEEeecCCCCccchhHHHHHHHHHHHHHHhcCCcchhCCCCCcccC
Q 027629          159 LVFRLSGTGSEGATIRLYIEQYEKDPSKTGRDSQEALAPLVEVALKLSKMEQFTGRSAPTVIT  221 (221)
Q Consensus       159 i~vRpSGTEP~~pkiRiY~Ea~~~~~~~~~~~~~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~  221 (221)
                      +++||||||.+|||||+|+|++..+..++..++++++.+++..++++++|++||||++|||||
T Consensus       517 i~~RpSGTE~~~PkiK~Y~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  579 (579)
T PLN02307        517 IIFRLSGTGSAGATIRLYIEQYEKDPSKHGRDAQEALKPLIDVALKLSKLKEFTGRSKPTVIT  579 (579)
T ss_pred             EEEEcCCCCCCCCeEEEEEEEecCCHHHHHHHHHHHHHHHHHHHHHHhChhHHhCCCCCCccC
Confidence            999999999333399999999777755666789999999999999999999999999999997

>KOG0625 consensus Phosphoglucomutase [Carbohydrate transport and metabolism] Back     alignment and domain information
>cd03085 PGM1 Phosphoglucomutase 1 (PGM1) catalyzes the bidirectional interconversion of glucose-1-phosphate (G-1-P) and glucose-6-phosphate (G-6-P) via a glucose 1,6-diphosphate intermediate, an important metabolic step in prokaryotes and eukaryotes Back     alignment and domain information
>PTZ00150 phosphoglucomutase-2-like protein; Provisional Back     alignment and domain information
>cd05801 PGM_like3 This bacterial PGM-like (phosphoglucomutase-like) protein of unknown function belongs to the alpha-D-phosphohexomutase superfamily Back     alignment and domain information
>cd05800 PGM_like2 This PGM-like (phosphoglucomutase-like) protein of unknown function belongs to the alpha-D-phosphohexomutase superfamily and is found in both archaea and bacteria Back     alignment and domain information
>TIGR01132 pgm phosphoglucomutase, alpha-D-glucose phosphate-specific Back     alignment and domain information
>PRK07564 phosphoglucomutase; Validated Back     alignment and domain information
>cd03089 PMM_PGM The phosphomannomutase/phosphoglucomutase (PMM/PGM) bifunctional enzyme catalyzes the reversible conversion of 1-phospho to 6-phospho-sugars (e Back     alignment and domain information
>cd05799 PGM2 This CD includes PGM2 (phosphoglucomutase 2) and PGM2L1 (phosphoglucomutase 2-like 1) Back     alignment and domain information
>cd05805 MPG1_transferase GTP-mannose-1-phosphate guanyltransferase (MPG1 transferase), also known as GDP-mannose pyrophosphorylase, is a bifunctional enzyme with both phosphomannose isomerase (PMI) activity and GDP-mannose phosphorylase (GMP) activity Back     alignment and domain information
>PRK09542 manB phosphomannomutase/phosphoglucomutase; Reviewed Back     alignment and domain information
>PRK14321 glmM phosphoglucosamine mutase; Provisional Back     alignment and domain information
>PRK15414 phosphomannomutase CpsG; Provisional Back     alignment and domain information
>cd05803 PGM_like4 This PGM-like (phosphoglucomutase-like) domain is located C-terminal to a mannose-1-phosphate guanyltransferase domain in a protein of unknown function that is found in both prokaryotes and eukaryotes Back     alignment and domain information
>COG1109 {ManB} Phosphomannomutase [Carbohydrate transport and metabolism] Back     alignment and domain information
>cd03088 ManB ManB is a bacterial phosphomannomutase (PMM) that catalyzes the conversion of mannose 6-phosphate to mannose-1-phosphate in the second of three steps in the GDP-mannose pathway, in which GDP-D-mannose is synthesized from fructose-6-phosphate Back     alignment and domain information
>cd03087 PGM_like1 This archaeal PGM-like (phosphoglucomutase-like) protein of unknown function belongs to the alpha-D-phosphohexomutase superfamily which includes several related enzymes that catalyze a reversible intramolecular phosphoryl transfer on their sugar substrates Back     alignment and domain information
>COG0033 Pgm Phosphoglucomutase [Carbohydrate transport and metabolism] Back     alignment and domain information
>KOG1220 consensus Phosphoglucomutase/phosphomannomutase [Carbohydrate transport and metabolism] Back     alignment and domain information
>PRK14324 glmM phosphoglucosamine mutase; Provisional Back     alignment and domain information
>PLN02371 phosphoglucosamine mutase family protein Back     alignment and domain information
>PRK14317 glmM phosphoglucosamine mutase; Provisional Back     alignment and domain information
>PRK14315 glmM phosphoglucosamine mutase; Provisional Back     alignment and domain information
>PRK14323 glmM phosphoglucosamine mutase; Provisional Back     alignment and domain information
>PRK10887 glmM phosphoglucosamine mutase; Provisional Back     alignment and domain information
>PRK14320 glmM phosphoglucosamine mutase; Provisional Back     alignment and domain information
>TIGR01455 glmM phosphoglucosamine mutase Back     alignment and domain information
>PRK14314 glmM phosphoglucosamine mutase; Provisional Back     alignment and domain information
>PRK14316 glmM phosphoglucosamine mutase; Provisional Back     alignment and domain information
>PRK14322 glmM phosphoglucosamine mutase; Provisional Back     alignment and domain information
>cd05802 GlmM GlmM is a bacterial phosphoglucosamine mutase (PNGM) that belongs to the alpha-D-phosphohexomutase superfamily Back     alignment and domain information
>PRK14319 glmM phosphoglucosamine mutase; Provisional Back     alignment and domain information
>cd03086 PGM3 PGM3 (phosphoglucomutase 3), also known as PAGM (phosphoacetylglucosamine mutase) and AGM1 (N-acetylglucosamine-phosphate mutase), is an essential enzyme found in eukaryotes that reversibly catalyzes the conversion of GlcNAc-6-phosphate into GlcNAc-1-phosphate as part of the UDP-N-acetylglucosamine (UDP-GlcNAc) biosynthetic pathway Back     alignment and domain information
>PRK14318 glmM phosphoglucosamine mutase; Provisional Back     alignment and domain information
>cd03084 phosphohexomutase The alpha-D-phosphohexomutase superfamily includes several related enzymes that catalyze a reversible intramolecular phosphoryl transfer on their sugar substrates Back     alignment and domain information
>PTZ00302 N-acetylglucosamine-phosphate mutase; Provisional Back     alignment and domain information
>PF02880 PGM_PMM_III: Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III; InterPro: IPR005846 The alpha-D-phosphohexomutase superfamily is composed of four related enzymes, each of which catalyses a phosphoryl transfer on their sugar substrates: phosphoglucomutase (PGM), phosphoglucomutase/phosphomannomutase (PGM/PMM), phosphoglucosamine mutase (PNGM), and phosphoacetylglucosamine mutase (PAGM) [] Back     alignment and domain information
>PLN02895 phosphoacetylglucosamine mutase Back     alignment and domain information
>PF00408 PGM_PMM_IV: Phosphoglucomutase/phosphomannomutase, C-terminal domain; InterPro: IPR005843 The alpha-D-phosphohexomutase superfamily is composed of four related enzymes, each of which catalyses a phosphoryl transfer on their sugar substrates: phosphoglucomutase (PGM), phosphoglucomutase/phosphomannomutase (PGM/PMM), phosphoglucosamine mutase (PNGM), and phosphoacetylglucosamine mutase (PAGM) [] Back     alignment and domain information
>KOG2537 consensus Phosphoglucomutase/phosphomannomutase [Carbohydrate transport and metabolism] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query221
1lxt_A561 Structure Of Phosphotransferase Phosphoglucomutase 2e-71
1jdy_A561 Rabbit Muscle Phosphoglucomutase Length = 561 2e-71
1kfi_A572 Crystal Structure Of The Exocytosis-Sensitive Phosp 1e-63
>pdb|1LXT|A Chain A, Structure Of Phosphotransferase Phosphoglucomutase From Rabbit Length = 561 Back     alignment and structure 
Iteration: 1

 Score =  265 bits (676), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 127/221 (57%), Positives = 162/221 (73%), Gaps = 10/221 (4%)
Query: 1   MYQVPTGWKFFGNLMDAGLCSICGEESFGTGSDHIREKDGIWAVLAWLSILAHKNKENLD 60
           +Y+ PTGWKFFGNLMDA   S+CGEESFGTGSDHIREKDG+WAVLAWLSILA + +    
Sbjct: 351 LYETPTGWKFFGNLMDASKLSLCGEESFGTGSDHIREKDGLWAVLAWLSILATRKQ---- 406
Query: 61  GGKLVTVEDIVRKHWATYGRHYYTRYDYENVDAGAAKELMANLVKMQSSLPEVNDIVKGI 120
                +VEDI++ HW  +GR+++TRYDYE V+A  A ++M +L  +      V       
Sbjct: 407 -----SVEDILKDHWHKFGRNFFTRYDYEEVEAEGATKMMKDLEALMFDRSFVGKQFSA- 460
Query: 121 CSDVSKVVNADEFEYKDPVDGSISKHQGIRYLFEDGSRLVFRLSGTGSEGATIRLYIEQY 180
              V  V  AD FEY DPVDGS+SK+QG+R +F DGSR++FRLSGTGS GATIRLYI+ Y
Sbjct: 461 NDKVYTVEKADNFEYHDPVDGSVSKNQGLRLIFADGSRIIFRLSGTGSAGATIRLYIDSY 520
Query: 181 EKDPSKTGRDSQEALAPLVEVALKLSKMEQFTGRSAPTVIT 221
           EKD +K  +D Q  LAPL+ +ALK+S++++ TGR+APTVIT
Sbjct: 521 EKDNAKINQDPQVMLAPLISIALKVSQLQERTGRTAPTVIT 561
>pdb|1JDY|A Chain A, Rabbit Muscle Phosphoglucomutase Length = 561 Back     alignment and structure
>pdb|1KFI|A Chain A, Crystal Structure Of The Exocytosis-Sensitive Phosphoprotein, Pp63PARAFUSIN (PHOSPHOGLUCOMUTASE) FROM Paramecium Length = 572 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query221
3pmg_A561 Alpha-D-glucose-1,6-bisphosphate; phosphoglucomuta 4e-93
1kfi_A572 Phosphoglucomutase 1; parafusin, phosphoprotein PP 6e-89
3na5_A570 Phosphoglucomutase; isomerase, metal binding; HET: 8e-61
2z0f_A524 Putative phosphoglucomutase; isomerase, magnesium, 6e-49
1tuo_A464 Putative phosphomannomutase; thermus thermophilus 3e-09
>3pmg_A Alpha-D-glucose-1,6-bisphosphate; phosphoglucomutase, phosphotransferase; HET: SEP; 2.40A {Oryctolagus cuniculus} SCOP: c.84.1.1 c.84.1.1 c.84.1.1 d.129.2.1 PDB: 1c4g_A* 1jdy_A* 1lxt_A 1vkl_A* 1c47_A* Length = 561 Back     alignment and structure
 Score =  282 bits (723), Expect = 4e-93
 Identities = 127/221 (57%), Positives = 162/221 (73%), Gaps = 10/221 (4%)

Query: 1   MYQVPTGWKFFGNLMDAGLCSICGEESFGTGSDHIREKDGIWAVLAWLSILAHKNKENLD 60
           +Y+ PTGWKFFGNLMDA   S+CGEESFGTGSDHIREKDG+WAVLAWLSILA + +    
Sbjct: 351 LYETPTGWKFFGNLMDASKLSLCGEESFGTGSDHIREKDGLWAVLAWLSILATRKQ---- 406

Query: 61  GGKLVTVEDIVRKHWATYGRHYYTRYDYENVDAGAAKELMANLVKMQSSLPEVNDIVKGI 120
                +VEDI++ HW  +GR+++TRYDYE V+A  A ++M +L  +      V       
Sbjct: 407 -----SVEDILKDHWHKFGRNFFTRYDYEEVEAEGATKMMKDLEALMFDRSFVGKQFSAN 461

Query: 121 CSDVSKVVNADEFEYKDPVDGSISKHQGIRYLFEDGSRLVFRLSGTGSEGATIRLYIEQY 180
              V  V  AD FEY DPVDGS+SK+QG+R +F DGSR++FRLSGTGS GATIRLYI+ Y
Sbjct: 462 -DKVYTVEKADNFEYHDPVDGSVSKNQGLRLIFADGSRIIFRLSGTGSAGATIRLYIDSY 520

Query: 181 EKDPSKTGRDSQEALAPLVEVALKLSKMEQFTGRSAPTVIT 221
           EKD +K  +D Q  LAPL+ +ALK+S++++ TGR+APTVIT
Sbjct: 521 EKDNAKINQDPQVMLAPLISIALKVSQLQERTGRTAPTVIT 561
>1kfi_A Phosphoglucomutase 1; parafusin, phosphoprotein PP63, exocytosis, isomerase; 2.40A {Paramecium tetraurelia} SCOP: c.84.1.1 c.84.1.1 c.84.1.1 d.129.2.1 PDB: 1kfq_A Length = 572 Back     alignment and structure
>3na5_A Phosphoglucomutase; isomerase, metal binding; HET: BTB; 1.70A {Salmonella enterica subsp} PDB: 3olp_A 2fuv_A* Length = 570 Back     alignment and structure
>2z0f_A Putative phosphoglucomutase; isomerase, magnesium, metal-binding, structural genomics; 2.52A {Thermus thermophilus} Length = 524 Back     alignment and structure
>1tuo_A Putative phosphomannomutase; thermus thermophilus HB8, biosynthesis of alginate, structural genomics; 1.70A {Thermus thermophilus} Length = 464 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query221
3pmg_A561 Alpha-D-glucose-1,6-bisphosphate; phosphoglucomuta 100.0
1kfi_A572 Phosphoglucomutase 1; parafusin, phosphoprotein PP 100.0
3na5_A570 Phosphoglucomutase; isomerase, metal binding; HET: 100.0
2z0f_A524 Putative phosphoglucomutase; isomerase, magnesium, 99.97
1tuo_A464 Putative phosphomannomutase; thermus thermophilus 99.97
2f7l_A455 455AA long hypothetical phospho-sugar mutase; phos 99.97
4hjh_A481 Phosphomannomutase; structural genomics, niaid, na 99.96
1wqa_A455 Phospho-sugar mutase; alpha-beta protein, unphosph 99.96
1p5d_X463 PMM, phosphomannomutase; alpha/beta protein, phosp 99.96
3uw2_A485 Phosphoglucomutase/phosphomannomutase family PROT; 99.94
3pdk_A469 Phosphoglucosamine mutase; 4-domain architecture, 99.92
3i3w_A443 Phosphoglucosamine mutase; csgid, IDP02164, isomer 99.9
2dka_A544 Phosphoacetylglucosamine mutase; isomerase; 1.93A 99.85
1wjw_A112 Phosphoacetylglucosamine mutase; carbohydrate meta 99.25
>3pmg_A Alpha-D-glucose-1,6-bisphosphate; phosphoglucomutase, phosphotransferase; HET: SEP; 2.40A {Oryctolagus cuniculus} SCOP: c.84.1.1 c.84.1.1 c.84.1.1 d.129.2.1 PDB: 1c4g_A* 1jdy_A* 1lxt_A 1vkl_A* 1c47_A* Back     alignment and structure
Probab=100.00  E-value=6.8e-46  Score=354.88  Aligned_cols=207  Identities=61%  Similarity=1.066  Sum_probs=183.9

Q ss_pred             CeEeccchHHHHHhHhcCCcEEEeccCCCccCCCCCCCcHHHHHHHHHHHHHHhcccCCCCCCccCHHHHHHHHHHhhCC
Q 027629            1 MYQVPTGWKFFGNLMDAGLCSICGEESFGTGSDHIREKDGIWAVLAWLSILAHKNKENLDGGKLVTVEDIVRKHWATYGR   80 (221)
Q Consensus         1 ~~~t~tGfk~I~~~m~~~~~~~GgEESgG~~~~~~~dkDGi~aal~~lel~a~~~~~~~~~~~~~tL~ell~~l~~~yg~   80 (221)
                      +++|+||||||+++|.+++++||||||+|++++|+++||||+|+++|+++++..++         +|+|++++||++||+
T Consensus       351 v~~t~vG~k~i~~~m~~~~~~~gGEeS~G~~~~~~~~kDGi~aal~~le~la~~g~---------~lsell~~l~~~yG~  421 (561)
T 3pmg_A          351 LYETPTGWKFFGNLMDASKLSLCGEESFGTGSDHIREKDGLWAVLAWLSILATRKQ---------SVEDILKDHWHKFGR  421 (561)
T ss_dssp             EEEECSSHHHHHHHHHTTCCSEEEETTTEEEETTSSSCCHHHHHHHHHHHHHHHCS---------CHHHHHHHHHHHHCE
T ss_pred             EEEEeccHHHHHHHhccCCeEEEEEecCCcCCCeeecCCHHHHHHHHHHHHHHhCC---------CHHHHHHHHHHHhCc
Confidence            57999999999999999999999999999778999999999999999999997776         999999999999999


Q ss_pred             ceeeeeeeEecChhHHHHHHHHHHHhhcCCCcccccccCccccc----cceeeeccccccCCCCCCCCCCCeEEEEEcCC
Q 027629           81 HYYTRYDYENVDAGAAKELMANLVKMQSSLPEVNDIVKGICSDV----SKVVNADEFEYKDPVDGSISKHQGIRYLFEDG  156 (221)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~p~~~~~~~g~~i~~----~~v~~~~d~~~~d~~~g~~~~~Dgl~~~~~dg  156 (221)
                      +|+.+.++..|+.+.+.++|+.|++.... |    .+.|..+.+    ++|...+||.+.||+++.+++.||+|+.|+||
T Consensus       422 ~~~~r~d~~~~~~~~~~~vm~~L~~~~~~-~----~~~g~~~~~~~~~~~v~~~~~f~~~dpvd~~v~~~dGvri~~~dg  496 (561)
T 3pmg_A          422 NFFTRYDYEEVEAEGATKMMKDLEALMFD-R----SFVGKQFSANDKVYTVEKADNFEYHDPVDGSVSKNQGLRLIFADG  496 (561)
T ss_dssp             EEEEEEEEEEECHHHHHHHHHHHHHHHHS-T----TSTTCEEEETTEEEEEEEEEECCEECTTTCCEECCCCEEEEETTS
T ss_pred             ccccccccccCCHHHHHHHHHHHHhcCCc-c----cccccccccccccceeeecccccccCcccCccccCceEEEEeCCC
Confidence            99999999888888889999998764322 1    233333321    47778889999999988899999999999999


Q ss_pred             eEEEEecCCCCCCCCeEEEEEEeecCCCCccchhHHHHHHHHHHHHHHhcCCcchhCCCCCcccC
Q 027629          157 SRLVFRLSGTGSEGATIRLYIEQYEKDPSKTGRDSQEALAPLVEVALKLSKMEQFTGRSAPTVIT  221 (221)
Q Consensus       157 ~wi~vRpSGTEP~~pkiRiY~Ea~~~~~~~~~~~~~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~  221 (221)
                      +|++||||||||.||+||||+|+.+++..+...++++.++++++.+++++++.++|||..|||||
T Consensus       497 swvlvRpSGte~~~P~lRvY~Ea~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  561 (561)
T 3pmg_A          497 SRIIFRLSGTGSAGATIRLYIDSYEKDNAKINQDPQVMLAPLISIALKVSQLQERTGRTAPTVIT  561 (561)
T ss_dssp             CEEEEEEEECSSSCEEEEEEEEEEECCTTTTTSCHHHHHHHHHHHHHHHHTHHHHHCCSSCSEEC
T ss_pred             CEEEEecCCCCCCCceEEEEEEecCCCHHHHHHHHHHHHHHHHHHHHHHHhHHHHhCCCCCCccC
Confidence            99999999999777799999999998766666689999999999999999999999999999998
>1kfi_A Phosphoglucomutase 1; parafusin, phosphoprotein PP63, exocytosis, isomerase; 2.40A {Paramecium tetraurelia} SCOP: c.84.1.1 c.84.1.1 c.84.1.1 d.129.2.1 PDB: 1kfq_A Back     alignment and structure
>3na5_A Phosphoglucomutase; isomerase, metal binding; HET: BTB; 1.70A {Salmonella enterica subsp} PDB: 3olp_A 2fuv_A* Back     alignment and structure
>2z0f_A Putative phosphoglucomutase; isomerase, magnesium, metal-binding, structural genomics; 2.52A {Thermus thermophilus} Back     alignment and structure
>1tuo_A Putative phosphomannomutase; thermus thermophilus HB8, biosynthesis of alginate, structural genomics; 1.70A {Thermus thermophilus} Back     alignment and structure
>2f7l_A 455AA long hypothetical phospho-sugar mutase; phosphomannomutase, phosphoglucomutase, isomerase; 2.80A {Sulfolobus tokodaii} Back     alignment and structure
>4hjh_A Phosphomannomutase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: SEP G6Q; 2.10A {Brucella melitensis BV} Back     alignment and structure
>1wqa_A Phospho-sugar mutase; alpha-beta protein, unphosphorylated form, enzyme-metal COMP isomerase; 2.00A {Pyrococcus horikoshii} Back     alignment and structure
>1p5d_X PMM, phosphomannomutase; alpha/beta protein, phosphohexomutase, phosphoserine, enzyme complex, enzyme-metal complex, isomerase; HET: SEP G1P; 1.60A {Pseudomonas aeruginosa} SCOP: c.84.1.1 c.84.1.1 c.84.1.1 d.129.2.1 PDB: 1k35_A* 1p5g_X* 1pcj_X* 1pcm_X* 1k2y_X* 2h5a_X* 2h4l_X* 2fkf_A* 3rsm_A 3bkq_X* 3c04_A* 2fkm_X* Back     alignment and structure
>3uw2_A Phosphoglucomutase/phosphomannomutase family PROT; structural genomics, seattle structural genomics center for infectious disease; 1.95A {Burkholderia thailandensis} Back     alignment and structure
>3pdk_A Phosphoglucosamine mutase; 4-domain architecture, mixed A/B fold, phosphohexomutase; 2.70A {Bacillus anthracis} Back     alignment and structure
>3i3w_A Phosphoglucosamine mutase; csgid, IDP02164, isomerase, magne metal-binding, phosphoprotein, structural genomics; HET: SEP; 2.30A {Francisella tularensis subsp} Back     alignment and structure
>2dka_A Phosphoacetylglucosamine mutase; isomerase; 1.93A {Candida albicans} PDB: 2dkc_A* 2dkd_A* Back     alignment and structure
>1wjw_A Phosphoacetylglucosamine mutase; carbohydrate metabolism, structural genomics, riken structural genomics/proteomics initiative, RSGI, isomerase; NMR {Mus musculus} SCOP: d.129.2.1 Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 221
d3pmga4141 d.129.2.1 (A:421-561) Phosphoglucomutase {Rabbit ( 1e-77
d1kfia4129 d.129.2.1 (A:444-572) Exocytosis-sensitive phospho 2e-69
d1kfia3120 c.84.1.1 (A:324-443) Exocytosis-sensitive phosphop 2e-15
d3pmga3117 c.84.1.1 (A:304-420) Phosphoglucomutase {Rabbit (O 8e-11
>d3pmga4 d.129.2.1 (A:421-561) Phosphoglucomutase {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 141 Back     information, alignment and structure

class: Alpha and beta proteins (a+b)
fold: TBP-like
superfamily: Phosphoglucomutase, C-terminal domain
family: Phosphoglucomutase, C-terminal domain
domain: Phosphoglucomutase
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

 Score =  227 bits (581), Expect = 1e-77
 Identities = 76/142 (53%), Positives = 101/142 (71%), Gaps = 1/142 (0%)

Query: 80  RHYYTRYDYENVDAGAAKELMANLVKMQSSLPEVNDIVKGICSDVSKVVNADEFEYKDPV 139
           R+++TRYDYE V+A  A ++M +L  +      V          V  V  AD FEY DPV
Sbjct: 1   RNFFTRYDYEEVEAEGATKMMKDLEALMFDRSFVGKQFSAN-DKVYTVEKADNFEYHDPV 59

Query: 140 DGSISKHQGIRYLFEDGSRLVFRLSGTGSEGATIRLYIEQYEKDPSKTGRDSQEALAPLV 199
           DGS+SK+QG+R +F DGSR++FRLSGTGS GATIRLYI+ YEKD +K  +D Q  LAPL+
Sbjct: 60  DGSVSKNQGLRLIFADGSRIIFRLSGTGSAGATIRLYIDSYEKDNAKINQDPQVMLAPLI 119

Query: 200 EVALKLSKMEQFTGRSAPTVIT 221
            +ALK+S++++ TGR+APTVIT
Sbjct: 120 SIALKVSQLQERTGRTAPTVIT 141
>d1kfia4 d.129.2.1 (A:444-572) Exocytosis-sensitive phosphoprotein, pp63/parafusin {Paramecium tetraurelia [TaxId: 5888]} Length = 129 Back     information, alignment and structure
>d1kfia3 c.84.1.1 (A:324-443) Exocytosis-sensitive phosphoprotein, pp63/parafusin {Paramecium tetraurelia [TaxId: 5888]} Length = 120 Back     information, alignment and structure
>d3pmga3 c.84.1.1 (A:304-420) Phosphoglucomutase {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 117 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query221
d3pmga4141 Phosphoglucomutase {Rabbit (Oryctolagus cuniculus) 99.94
d1kfia4129 Exocytosis-sensitive phosphoprotein, pp63/parafusi 99.93
d3pmga3117 Phosphoglucomutase {Rabbit (Oryctolagus cuniculus) 99.81
d1kfia3120 Exocytosis-sensitive phosphoprotein, pp63/parafusi 99.81
d1p5dx496 Phosphomannomutase/phosphoglucomutase {Pseudomonas 99.61
d1p5dx3109 Phosphomannomutase/phosphoglucomutase {Pseudomonas 99.57
d1wjwa_112 Phosphoacetylglucosamine mutase {Mouse (Mus muscul 99.15
>d3pmga4 d.129.2.1 (A:421-561) Phosphoglucomutase {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Back     information, alignment and structure
class: Alpha and beta proteins (a+b)
fold: TBP-like
superfamily: Phosphoglucomutase, C-terminal domain
family: Phosphoglucomutase, C-terminal domain
domain: Phosphoglucomutase
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=99.94  E-value=2.2e-27  Score=186.75  Aligned_cols=136  Identities=55%  Similarity=0.898  Sum_probs=121.8

Q ss_pred             ceeeeeeeEecChhHHHHHHHHHHHhhcCCCcccccccCcccc----ccceeeeccccccCCCCCCCCCCCeEEEEEcCC
Q 027629           81 HYYTRYDYENVDAGAAKELMANLVKMQSSLPEVNDIVKGICSD----VSKVVNADEFEYKDPVDGSISKHQGIRYLFEDG  156 (221)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~p~~~~~~~g~~i~----~~~v~~~~d~~~~d~~~g~~~~~Dgl~~~~~dg  156 (221)
                      .||+|.+|+.++.+.+.++|+.|+.+..++.     +.|..+.    +..|..++||.++||+||++++.+||++.|+||
T Consensus         2 nyytRyDYE~v~s~~A~~~m~~L~~~~~~~~-----l~G~~~~~~~~~~~v~~aDdFsYtDPVDgSvs~~QGlRi~F~dG   76 (141)
T d3pmga4           2 NFFTRYDYEEVEAEGATKMMKDLEALMFDRS-----FVGKQFSANDKVYTVEKADNFEYHDPVDGSVSKNQGLRLIFADG   76 (141)
T ss_dssp             EEEEEEEEEEECHHHHHHHHHHHHHHHHSTT-----STTCEEEETTEEEEEEEEEECCEECTTTCCEECCCCEEEEETTS
T ss_pred             CcCccCCcCCCCHHHHHHHHHHHHHHhcCcc-----cCCCcccCCCceeEEEecCceeecCCCCCccccCCcEEEEEcCC
Confidence            4789999999999999999999998754432     3343322    136888999999999999999999999999999


Q ss_pred             eEEEEecCCCCCCCCeEEEEEEeecCCCCccchhHHHHHHHHHHHHHHhcCCcchhCCCCCcccC
Q 027629          157 SRLVFRLSGTGSEGATIRLYIEQYEKDPSKTGRDSQEALAPLVEVALKLSKMEQFTGRSAPTVIT  221 (221)
Q Consensus       157 ~wi~vRpSGTEP~~pkiRiY~Ea~~~~~~~~~~~~~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~  221 (221)
                      +++++|.|||-..|+.||+|+|.+.++..+...++|+.|+++++.+++++++.++|||.+|||||
T Consensus        77 sRiVfRLSGTGs~GATiRlY~E~ye~d~~~~~~~~q~aL~~li~~Al~~s~i~~~tGr~~PtVIT  141 (141)
T d3pmga4          77 SRIIFRLSGTGSAGATIRLYIDSYEKDNAKINQDPQVMLAPLISIALKVSQLQERTGRTAPTVIT  141 (141)
T ss_dssp             CEEEEEEEECSSSCEEEEEEEEEEECCTTTTTSCHHHHHHHHHHHHHHHHTHHHHHCCSSCSEEC
T ss_pred             CEEEEEecCCCCCCcEEEEEEEeccCChHHcCcCHHHHHHHHHHHHHHHHHHHHHhCCCCCCccC
Confidence            99999999999999999999999999988888899999999999999999999999999999998
>d1kfia4 d.129.2.1 (A:444-572) Exocytosis-sensitive phosphoprotein, pp63/parafusin {Paramecium tetraurelia [TaxId: 5888]} Back     information, alignment and structure
>d3pmga3 c.84.1.1 (A:304-420) Phosphoglucomutase {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Back     information, alignment and structure
>d1kfia3 c.84.1.1 (A:324-443) Exocytosis-sensitive phosphoprotein, pp63/parafusin {Paramecium tetraurelia [TaxId: 5888]} Back     information, alignment and structure
>d1p5dx4 d.129.2.1 (X:368-463) Phosphomannomutase/phosphoglucomutase {Pseudomonas aeruginosa [TaxId: 287]} Back     information, alignment and structure
>d1p5dx3 c.84.1.1 (X:259-367) Phosphomannomutase/phosphoglucomutase {Pseudomonas aeruginosa [TaxId: 287]} Back     information, alignment and structure
>d1wjwa_ d.129.2.1 (A:) Phosphoacetylglucosamine mutase {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure