Citrus Sinensis ID: 027761
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 219 | ||||||
| 183211898 | 379 | 1-acyl-sn-glycerol-3-phosphate acyltrans | 0.867 | 0.501 | 0.678 | 5e-72 | |
| 224063587 | 372 | predicted protein [Populus trichocarpa] | 0.812 | 0.478 | 0.724 | 5e-71 | |
| 356564243 | 383 | PREDICTED: probable 1-acyl-sn-glycerol-3 | 0.876 | 0.501 | 0.640 | 1e-68 | |
| 388492986 | 383 | unknown [Medicago truncatula] gi|3885160 | 0.876 | 0.501 | 0.640 | 3e-68 | |
| 224137242 | 372 | predicted protein [Populus trichocarpa] | 0.803 | 0.473 | 0.698 | 3e-68 | |
| 359807379 | 383 | uncharacterized protein LOC100808657 [Gl | 0.876 | 0.501 | 0.625 | 4e-67 | |
| 359475266 | 370 | PREDICTED: probable 1-acyl-sn-glycerol-3 | 0.799 | 0.472 | 0.674 | 5e-66 | |
| 297741418 | 203 | unnamed protein product [Vitis vinifera] | 0.799 | 0.862 | 0.674 | 6e-66 | |
| 388522193 | 398 | unknown [Lotus japonicus] | 0.876 | 0.482 | 0.604 | 2e-65 | |
| 359492660 | 440 | PREDICTED: probable 1-acyl-sn-glycerol-3 | 0.817 | 0.406 | 0.661 | 5e-65 |
| >gi|183211898|gb|ACC59199.1| 1-acyl-sn-glycerol-3-phosphate acyltransferase [Ricinus communis] | Back alignment and taxonomy information |
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Score = 276 bits (705), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 129/190 (67%), Positives = 157/190 (82%)
Query: 27 FSEEKRNRSQKFAADVGLPVLTNVLLPKTRGFCLCLETLRNTLDAVYDMTIAYKNPCPSF 86
F+E+K SQKFAA+VGLPVL NVLLPKTRGFC+CLE LR +LDAVYD++IAYK+ CPSF
Sbjct: 189 FTEKKCLGSQKFAAEVGLPVLKNVLLPKTRGFCVCLEVLRGSLDAVYDVSIAYKHQCPSF 248
Query: 87 MDNVFGVDPSEVHIHVRRIPVKEIPASETDAAAWLMDAFQLKDQLLDKFNAQGHFPNQCQ 146
+DNVFG+DP+EVHIH+RRIPV +IP S+++AA WLM+ FQ+KD+LL F +GHFPN+
Sbjct: 249 LDNVFGLDPAEVHIHIRRIPVNDIPVSDSEAATWLMNTFQIKDELLSGFKTRGHFPNEGT 308
Query: 147 ENELSTLKCLVNFIVVISLTAIFTYLTLFSSIWYKIYVGLACTSLASVTYFNIHPMLVVG 206
E ELSTL+CLVN +VISLTAIFTYLTLFSS+W+KIYV LAC L+ VTYFN P+ VV
Sbjct: 309 EGELSTLRCLVNITIVISLTAIFTYLTLFSSVWFKIYVSLACVFLSLVTYFNFLPLPVVD 368
Query: 207 FSKAMFCCKK 216
+MF KK
Sbjct: 369 SFNSMFSYKK 378
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Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224063587|ref|XP_002301215.1| predicted protein [Populus trichocarpa] gi|222842941|gb|EEE80488.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
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| >gi|356564243|ref|XP_003550365.1| PREDICTED: probable 1-acyl-sn-glycerol-3-phosphate acyltransferase 4-like [Glycine max] | Back alignment and taxonomy information |
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| >gi|388492986|gb|AFK34559.1| unknown [Medicago truncatula] gi|388516089|gb|AFK46106.1| unknown [Medicago truncatula] | Back alignment and taxonomy information |
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| >gi|224137242|ref|XP_002327077.1| predicted protein [Populus trichocarpa] gi|222835392|gb|EEE73827.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
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| >gi|359807379|ref|NP_001241383.1| uncharacterized protein LOC100808657 [Glycine max] gi|255635102|gb|ACU17909.1| unknown [Glycine max] | Back alignment and taxonomy information |
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| >gi|359475266|ref|XP_003631627.1| PREDICTED: probable 1-acyl-sn-glycerol-3-phosphate acyltransferase 5-like [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|297741418|emb|CBI32549.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|388522193|gb|AFK49158.1| unknown [Lotus japonicus] | Back alignment and taxonomy information |
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| >gi|359492660|ref|XP_002281838.2| PREDICTED: probable 1-acyl-sn-glycerol-3-phosphate acyltransferase 4-like [Vitis vinifera] | Back alignment and taxonomy information |
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Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 219 | ||||||
| TAIR|locus:2027196 | 378 | LPAT4 "lysophosphatidyl acyltr | 0.799 | 0.462 | 0.662 | 1.7e-59 | |
| TAIR|locus:2087916 | 375 | LPAT5 "lysophosphatidyl acyltr | 0.835 | 0.488 | 0.565 | 2.4e-53 | |
| DICTYBASE|DDB_G0288523 | 345 | agpB "putative 1-acylglycerol- | 0.662 | 0.420 | 0.371 | 8.7e-24 | |
| UNIPROTKB|G5E5P6 | 376 | AGPAT3 "Uncharacterized protei | 0.680 | 0.396 | 0.387 | 9.8e-24 | |
| UNIPROTKB|Q9NRZ7 | 376 | AGPAT3 "1-acyl-sn-glycerol-3-p | 0.680 | 0.396 | 0.380 | 2.3e-22 | |
| UNIPROTKB|E1BYF3 | 376 | AGPAT3 "Uncharacterized protei | 0.680 | 0.396 | 0.374 | 2.4e-22 | |
| MGI|MGI:1336186 | 376 | Agpat3 "1-acylglycerol-3-phosp | 0.680 | 0.396 | 0.374 | 2.9e-22 | |
| UNIPROTKB|E2R575 | 375 | AGPAT3 "Uncharacterized protei | 0.680 | 0.397 | 0.374 | 5e-22 | |
| RGD|1305787 | 376 | Agpat3 "1-acylglycerol-3-phosp | 0.680 | 0.396 | 0.367 | 1.6e-21 | |
| TAIR|locus:2076676 | 389 | LPAT2 "AT3G57650" [Arabidopsis | 0.716 | 0.403 | 0.359 | 2.1e-21 |
| TAIR|locus:2027196 LPAT4 "lysophosphatidyl acyltransferase 4" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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Score = 610 (219.8 bits), Expect = 1.7e-59, P = 1.7e-59
Identities = 116/175 (66%), Positives = 138/175 (78%)
Query: 27 FSEEKRNRSQKFAADVGLPVLTNVLLPKTRGFCLCLETLRNTLDAVYDMTIAYKNPCPSF 86
F+EEK RSQKFAA+VGLP L+NVLLPKTRGF +CLE L N+LDAVYD+TIAYK CPSF
Sbjct: 189 FTEEKCKRSQKFAAEVGLPALSNVLLPKTRGFGVCLEVLHNSLDAVYDLTIAYKPRCPSF 248
Query: 87 MDNVFGVDPSEVHIHVRRIPVKEIPASETDAAAWLMDAFQLKDQLLDKFNAQGHFPNQCQ 146
MDNVFG DPSEVHIHVRR+ +KEIPA+E +++AWLMD+F+LKD+LL FNAQG FPNQ
Sbjct: 249 MDNVFGTDPSEVHIHVRRVLLKEIPANEAESSAWLMDSFKLKDKLLSDFNAQGKFPNQRP 308
Query: 147 ENELSTLKCLVNFIVVISLTAIFTYLTLFSSIWYKIYVGLACTSLASVTYFNIHP 201
E ELS LKC+ F VISLT +F YLTL+S +K+Y L+ T L TY+ P
Sbjct: 309 EEELSVLKCIATFAGVISLTVVFIYLTLYSHSCFKVYACLSGTYLTFATYYKFQP 363
|
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| TAIR|locus:2087916 LPAT5 "lysophosphatidyl acyltransferase 5" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| DICTYBASE|DDB_G0288523 agpB "putative 1-acylglycerol-3-phosphate O-acyltransferase" [Dictyostelium discoideum (taxid:44689)] | Back alignment and assigned GO terms |
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| UNIPROTKB|G5E5P6 AGPAT3 "Uncharacterized protein" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
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| UNIPROTKB|Q9NRZ7 AGPAT3 "1-acyl-sn-glycerol-3-phosphate acyltransferase gamma" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
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| UNIPROTKB|E1BYF3 AGPAT3 "Uncharacterized protein" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
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| MGI|MGI:1336186 Agpat3 "1-acylglycerol-3-phosphate O-acyltransferase 3" [Mus musculus (taxid:10090)] | Back alignment and assigned GO terms |
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| UNIPROTKB|E2R575 AGPAT3 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
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| RGD|1305787 Agpat3 "1-acylglycerol-3-phosphate O-acyltransferase 3" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
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| TAIR|locus:2076676 LPAT2 "AT3G57650" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 219 | |||
| PLN02510 | 374 | PLN02510, PLN02510, probable 1-acyl-sn-glycerol-3- | 1e-107 | |
| PLN02380 | 376 | PLN02380, PLN02380, 1-acyl-sn-glycerol-3-phosphate | 3e-31 | |
| cd07990 | 193 | cd07990, LPLAT_LCLAT1-like, Lysophospholipid Acylt | 6e-27 | |
| PRK14014 | 301 | PRK14014, PRK14014, putative acyltransferase; Prov | 9e-09 |
| >gnl|CDD|178126 PLN02510, PLN02510, probable 1-acyl-sn-glycerol-3-phosphate acyltransferase | Back alignment and domain information |
|---|
Score = 312 bits (801), Expect = e-107
Identities = 120/184 (65%), Positives = 147/184 (79%)
Query: 27 FSEEKRNRSQKFAADVGLPVLTNVLLPKTRGFCLCLETLRNTLDAVYDMTIAYKNPCPSF 86
++E K RSQKFAA+ GLP+L NVLLPKT+GF CL+ LR +LDAVYD+TI YK+ CPSF
Sbjct: 184 YTEAKCQRSQKFAAEHGLPILNNVLLPKTKGFVSCLQELRCSLDAVYDVTIGYKHRCPSF 243
Query: 87 MDNVFGVDPSEVHIHVRRIPVKEIPASETDAAAWLMDAFQLKDQLLDKFNAQGHFPNQCQ 146
+DNVFG+DPSEVHIH+RRIP+K+IP SE + +AWLMD FQLKDQLL F AQGHFPN+
Sbjct: 244 LDNVFGIDPSEVHIHIRRIPLKQIPTSEDEVSAWLMDRFQLKDQLLSDFYAQGHFPNEGT 303
Query: 147 ENELSTLKCLVNFIVVISLTAIFTYLTLFSSIWYKIYVGLACTSLASVTYFNIHPMLVVG 206
E ELSTLKCL NF+ VI+LT +FTYLTLFSS+W+KIYV L+C L S T+FN P ++
Sbjct: 304 EGELSTLKCLANFLAVIALTTVFTYLTLFSSVWFKIYVSLSCAYLTSATHFNWRPPPLIE 363
Query: 207 FSKA 210
+
Sbjct: 364 SLEN 367
|
Length = 374 |
| >gnl|CDD|178006 PLN02380, PLN02380, 1-acyl-sn-glycerol-3-phosphate acyltransferase | Back alignment and domain information |
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| >gnl|CDD|153252 cd07990, LPLAT_LCLAT1-like, Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: LCLAT1-like | Back alignment and domain information |
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| >gnl|CDD|237584 PRK14014, PRK14014, putative acyltransferase; Provisional | Back alignment and domain information |
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Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 219 | |||
| PLN02510 | 374 | probable 1-acyl-sn-glycerol-3-phosphate acyltransf | 100.0 | |
| PLN02380 | 376 | 1-acyl-sn-glycerol-3-phosphate acyltransferase | 100.0 | |
| KOG1505 | 346 | consensus Lysophosphatidic acid acyltransferase LP | 100.0 | |
| PRK14014 | 301 | putative acyltransferase; Provisional | 99.96 | |
| cd07990 | 193 | LPLAT_LCLAT1-like Lysophospholipid Acyltransferase | 99.88 |
| >PLN02510 probable 1-acyl-sn-glycerol-3-phosphate acyltransferase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-54 Score=398.72 Aligned_cols=211 Identities=57% Similarity=0.955 Sum_probs=198.9
Q ss_pred hhhhhhhcc--CCceEEEEEE---eeCHHHHHHHHHHHHHcCCCCCccccccCchhHHHHHHHhhcccCeEEEEEEEecC
Q 027761 7 KKVSCFLHT--HFEIHILLYF---WFSEEKRNRSQKFAADVGLPVLTNVLLPKTRGFCLCLETLRNTLDAVYDMTIAYKN 81 (219)
Q Consensus 7 ~~~~c~~~~--~~~~~~~~~~---RfT~~k~~kS~~fA~k~gLP~lkhvL~PRtkGf~~~l~~Lr~~~~aVyDvTiaY~~ 81 (219)
.+..+...+ ..|+++++|+ |+|++++++|+++|+++|+|+++|+|+||++||..+++.|++++++|||+||+|++
T Consensus 159 l~~~l~~lk~~~~~~~LvIFPEGTR~t~~~~~~s~~~A~k~glPil~~vL~PRt~Gf~~~l~~L~~~l~~IyDvTi~Y~~ 238 (374)
T PLN02510 159 IRQMLSSFKDPRDPLWLALFPEGTDYTEAKCQRSQKFAAEHGLPILNNVLLPKTKGFVSCLQELRCSLDAVYDVTIGYKH 238 (374)
T ss_pred HHHHHHHHhccCCCcEEEEeCCcCCCCccccchHHHHHHHcCCCcceeEEcCccccHHHHHHHHHHHHHhheeEEEEeCC
Confidence 344443333 5678999999 99999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCchhhccCCCCceEEEEEEEEeCCCCCCChHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCCccchhhhHHHHHH
Q 027761 82 PCPSFMDNVFGVDPSEVHIHVRRIPVKEIPASETDAAAWLMDAFQLKDQLLDKFNAQGHFPNQCQENELSTLKCLVNFIV 161 (219)
Q Consensus 82 ~~Ps~~~~l~G~~p~~Vhihvrr~pi~~iP~~e~~~~~WL~~~w~eKD~lL~~f~~~g~Fp~~~~~~~~~~~~~l~~~~~ 161 (219)
+.|++++++.|..|.+|||||||+|+++||++++++++||+++|+|||++|++|+++|+||+++.+++++.+++|+|+++
T Consensus 239 ~~Ps~~~~~~g~~p~~vhihvrr~pi~~iP~~~~~~~~WL~~~w~eKD~lL~~f~~~g~Fp~~~~~~~~~~~~~l~~~~~ 318 (374)
T PLN02510 239 RCPSFLDNVFGIDPSEVHIHIRRIPLKQIPTSEDEVSAWLMDRFQLKDQLLSDFYAQGHFPNEGTEGELSTLKCLANFLA 318 (374)
T ss_pred CCCCHHHHhcCCCCcEEEEEEEEEECccccCcHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCcCCCCccchhhHHHHH
Confidence 99999999999899999999999999999999999999999999999999999999999999988777777899999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhheeeeccceecccchhhhhhhc
Q 027761 162 VISLTAIFTYLTLFSSIWYKIYVGLACTSLASVTYFNIHPMLVVGFSKAMFCCKKT 217 (219)
Q Consensus 162 w~~l~~~~~yl~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 217 (219)
|++++.+++|++++|+.||++|+.++|+|++++|+|||||+|++++.++..+.||+
T Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 374 (374)
T PLN02510 319 VIALTTVFTYLTLFSSVWFKIYVSLSCAYLTSATHFNWRPPPLIESLENSLKLVNK 374 (374)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCccccccchhchhccCC
Confidence 99999999999999999999999999999999999999999999999999988874
|
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| >PLN02380 1-acyl-sn-glycerol-3-phosphate acyltransferase | Back alignment and domain information |
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| >KOG1505 consensus Lysophosphatidic acid acyltransferase LPAAT and related acyltransferases [Lipid transport and metabolism] | Back alignment and domain information |
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| >PRK14014 putative acyltransferase; Provisional | Back alignment and domain information |
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| >cd07990 LPLAT_LCLAT1-like Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: LCLAT1-like | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
No homologous structure with e-value below 0.005
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
No hit with e-value below 0.005
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
No hit with probability above 80.00
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
No hit with e-value below 0.005
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 219 | |||
| d1iuqa_ | 367 | Glycerol-3-phosphate (1)-acyltransferase {Cushaw s | 86.2 |
| >d1iuqa_ c.112.1.1 (A:) Glycerol-3-phosphate (1)-acyltransferase {Cushaw squash (Cucurbita moschata) [TaxId: 3662]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Glycerol-3-phosphate (1)-acyltransferase superfamily: Glycerol-3-phosphate (1)-acyltransferase family: Glycerol-3-phosphate (1)-acyltransferase domain: Glycerol-3-phosphate (1)-acyltransferase species: Cushaw squash (Cucurbita moschata) [TaxId: 3662]
Probab=86.20 E-value=0.19 Score=43.58 Aligned_cols=88 Identities=10% Similarity=0.097 Sum_probs=49.2
Q ss_pred cCchhHHHHHHHhhcccCeEEEEEEEecCCCCC--chhhccCC----CCceEEEEEEE-EeCCC-------CCCChHHHH
Q 027761 53 PKTRGFCLCLETLRNTLDAVYDMTIAYKNPCPS--FMDNVFGV----DPSEVHIHVRR-IPVKE-------IPASETDAA 118 (219)
Q Consensus 53 PRtkGf~~~l~~Lr~~~~aVyDvTiaY~~~~Ps--~~~~l~G~----~p~~Vhihvrr-~pi~~-------iP~~e~~~~ 118 (219)
|+..|..+.+....+.-..||+++|.+.+..|. -..--.|. ....|.|.+-. +++++ .++.++.+.
T Consensus 251 ~~~~~~~~~LA~~sgvP~hV~Pvai~~~d~~pP~~~v~~~ige~R~~~~~~V~i~~G~pId~~~~~~~~~~~~e~~ea~~ 330 (367)
T d1iuqa_ 251 ASSVDNMRRLIQHSDVPGHLFPLALLCHDIMPPPSQVEIEIGEKRVIAFNGAGLSVAPEISFEEIAATHKNPEEVREAYS 330 (367)
T ss_dssp HHHHHHHHHHHHTSSSCEEEEEEEEECGGGSCCC----------CCCCCBCCEEEECCCCCHHHHHHTSSSHHHHHHHHH
T ss_pred ccchHHHHHHHhcCCCCceEechhhhcccccCCCcccccchhhccccCCCceeEEeCCCcchhhhhhhccchHHHHHHHH
Confidence 455555555544443334599999998765321 11111111 22334444321 22222 223346688
Q ss_pred HHHHHHHHHHHHHHHHHHhCCC
Q 027761 119 AWLMDAFQLKDQLLDKFNAQGH 140 (219)
Q Consensus 119 ~WL~~~w~eKD~lL~~f~~~g~ 140 (219)
+|+++.+.++.+.|++.+..++
T Consensus 331 k~l~d~v~eq~~~Lk~ai~gk~ 352 (367)
T d1iuqa_ 331 KALFDSVAMQYNVLKTAISGKQ 352 (367)
T ss_dssp HHHHHHHHHHHHHHHHHTTTCC
T ss_pred HHHHHHHHHHHHHHHHHHhcCC
Confidence 9999999999999999887655
|