Citrus Sinensis ID: 027833

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------22
Protein Sequence
MEDKREIKAKKSQKKQVHLFYCVECEELARKVAAQSDLITLQSINWRNFADGWPNLYINSAHDIRGQHVAFLASFSSPGVIFEQISVIYALPRLFVASFTLVLPFFPTGSFERMEEEGDVATAFTMARILSNIPTSRGGPTSLVIYDIHALQERFYFSDHVLPLFETGIPLLKQRLHQLPDANNLLHFRMMEPGSDSTRCWIISLRWCVPRFVKVIRG
Secondary Structure (PSIPRED)
ccHHHHHHHHHcccccEEEEEccccHHHHHHHHHHccccccccEEEEEccccccEEEEEccccccccEEEEEEcccccHHHHHHHHHHHHcccccccEEEEEEEcccccccccccccccccHHHHHHHHHcccccccccccEEEEEEcccccccccccccccccccccHHHHHHHHHHccccccccEEHHccccccccEEEEEEEEcccccEEEEccc
Secondary Structure Prediction (SSPRO)
cccccHHHccccccccEEEEEccccHHHHHHHHHHccccEccEEEEEEccccccEEEEEcccccccccEEEEEccccHHHHHHHHHHHHHHHHHHHccEEEEEEccccccHHHHccccccHHHHHHHHHHHccccccccccEEEEEEHHHHHHHcccccccHHHHHHHHHHHHHHHHHccccccEEEEEEEEccccccEEEEEEcccccccEEEEEcc
Coil and Loop (DISEMBL)
MEDKREIKAKKSQKKQVHLFYCVECEELARKVAAQSDLItlqsinwrnfadgwpnlyinsahdirGQHVAFLAsfsspgviFEQISVIYALPRLFVASFTlvlpffptgsfermeeegdvATAFTMARILsniptsrggptslVIYDIHALqerfyfsdhvlplfetGIPLLKQRLhqlpdannllhfrmmepgsdstrcWIISLrwcvprfvkvirg
Flexible Loop (DISEMBL)
medkreikakksqkkqvhlFYCVECEELARKVAAQSDLITLQSINWRNFADGWPNLYINSAHDIRGQHVAFLASFSSPGVIFEQISVIYALPRLFVASFTLVLPFFPTGSFERMEEEGDVATAFTMARILsniptsrggptSLVIYDIHALQERFYFSDHVLPLFETGIPLLKQRLHQLPDANNLLHFRMMEPGSDSTRCWIISLRWCVPRFVKVIRG
Low Complexity Region (SEG)
MEDKREIKAKKSQKKQVHLFYCVECEELARKVAAQSDLITLQSINWRNFADGWPNLYINSAHDIRGQHVAFLASFSSPGVIFEQISVIYALPRLFVASFTLVLPFFPTGSFERMEEEGDVATAFTMARILSNIPTSRGGPTSLVIYDIHALQERFYFSDHVLPLFETGIPLLKQRLHQLPDANNLLHFRMMEPGSDSTRCWIISLRWCVPRFVKVIRG
Disordered region (IsUnstruct)
****************VHLFYCVECEELARKVAAQSDLITLQSINWRNFADGWPNLYINSAHDIRGQHVAFLASFSSPGVIFEQISVIYALPRLFVASFTLVLPFFPTGSFERMEEEGDVATAFTMARILSNIPTSRGGPTSLVIYDIHALQERFYFSDHVLPLFETGIPLLKQRLHQLPDANNLLHFRMMEPGSDSTRCWIISLRWCVPRFVKVI**
Disordered Region (DISOPRED)
******************LFYCVECEELARKVAAQSDLITLQSINWRNFADGWPNLYINSAHDIRGQHVAFLASFSSPGVIFEQISVIYALPRLFVASFTLVLPFFPTGSFERMEEEGDVATAFTMARILSNIPTSRGGPTSLVIYDIHALQERFYFSDHVLPLFETGIPLLKQRLHQLPDANNLLHFRMMEPGSDSTRCWIISLRWCVPRFVKV***
Disordered Region (DISEMBL)
***************QVHLFYCVECEELARKVAAQSDLITLQSINWRNFADGWPNLYINSAHDIRGQHVAFLASFSSPGVIFEQISVIYALPRLFVASFTLVLPFFPTGSFERMEEEGDVATAFTMARILSNIPTSRGGPTSLVIYDIHALQERFYFSDHVLPLFETGIPLLKQRLHQLPDANNLLHFRMMEPGSDSTRCWIISLRWCVPRFVKVIRG
Disordered Region (DISPRO)
*************KKQVHLFYCVECEELARKVAAQSDLITLQSINWRNFADGWPNLYINSAHDIRGQHVAFLASFSSPGVIFEQISVIYALPRLFVASFTLVLPFFPTGSFERMEEEGDVATAFTMARILSNIPTSRGGPTSLVIYDIHALQERFYFSDHVLPLFETGIPLLKQRLHQLPDANNLLHFRMMEPGSDSTRCWIISLRWCVPRFVKVIRG
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MEDKREIKAKKSQKKQVHLFYCVECEELARKVAAQSDLITLQSINWRNFADGWPNLYINSAHDIRGQHVAFLASFSSPGVIFEQISVIYALPRLFVASFTLVLPFFPTGSFERMEEEGDVATAFTMARILSNIPTSRGGPTSLVIYDIHALQERFYFSDHVLPLFETGIPLLKQRLHQLPDANNLLHFRMMEPGSDSTRCWIISLRWCVPRFVKVIRG
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	218	2.2.26 [Sep-21-2011]
Q9XGA1	318	Ribose-phosphate pyrophos	N/A	no	0.811	0.556	0.864	7e-86
Q680A5	337	Ribose-phosphate pyrophos	yes	no	0.798	0.516	0.850	2e-85
Q6ZFT5	325	Ribose-phosphate pyrophos	yes	no	0.788	0.529	0.837	6e-75
Q9XGA0	406	Ribose-phosphate pyrophos	N/A	no	0.784	0.421	0.742	5e-72
Q8S2E5	409	Ribose-phosphate pyrophos	no	no	0.784	0.418	0.736	6e-72
Q93Z66	411	Ribose-phosphate pyrophos	no	no	0.816	0.433	0.702	4e-71
Q8P137	326	Ribose-phosphate pyrophos	N/A	no	0.711	0.475	0.287	4e-08
Q8DZK4	324	Ribose-phosphate pyrophos	N/A	no	0.738	0.496	0.271	2e-07
Q8E568	324	Ribose-phosphate pyrophos	N/A	no	0.738	0.496	0.271	2e-07
Q8E2H0	322	Ribose-phosphate pyrophos	N/A	no	0.660	0.447	0.296	5e-07

>sp|Q9XGA1|KPRS4_SPIOL Ribose-phosphate pyrophosphokinase 4 OS=Spinacia oleracea GN=PRS4 PE=2 SV=1

 Score =  316 bits (810), Expect = 7e-86,   Method: Compositional matrix adjust.
 Identities = 153/177 (86%), Positives = 165/177 (93%)

Query: 10  KKSQKKQVHLFYCVECEELARKVAAQSDLITLQSINWRNFADGWPNLYINSAHDIRGQHV 69
           +K   KQV LFYCVE EELARKVAAQS LITLQSINWR+F DG+PNL+IN+A DIRGQHV
Sbjct: 2   EKPNTKQVLLFYCVEAEELARKVAAQSPLITLQSINWRSFDDGFPNLFINNAQDIRGQHV 61

Query: 70  AFLASFSSPGVIFEQISVIYALPRLFVASFTLVLPFFPTGSFERMEEEGDVATAFTMARI 129
           AFLA+FSSP VIFEQ+SVIYALPRLFVASFTLVLPFFPTGSFERMEEEGDVATAFTMARI
Sbjct: 62  AFLAAFSSPAVIFEQLSVIYALPRLFVASFTLVLPFFPTGSFERMEEEGDVATAFTMARI 121

Query: 130 LSNIPTSRGGPTSLVIYDIHALQERFYFSDHVLPLFETGIPLLKQRLHQLPDANNLL 186
           LSNIP SRGGPTS+VIYDIHALQERFYFSD+VLPLFETGIPLLKQRL QLPDA+ ++
Sbjct: 122 LSNIPVSRGGPTSVVIYDIHALQERFYFSDNVLPLFETGIPLLKQRLDQLPDADKIV 178

Spinacia oleracea (taxid: 3562)
EC: 2EC: .EC: 7EC: .EC: 6EC: .EC: 1

>sp|Q680A5|KPRS4_ARATH Ribose-phosphate pyrophosphokinase 4 OS=Arabidopsis thaliana GN=PRS4 PE=2 SV=2

 Score =  315 bits (806), Expect = 2e-85,   Method: Compositional matrix adjust.
 Identities = 148/174 (85%), Positives = 163/174 (93%)

Query: 13  QKKQVHLFYCVECEELARKVAAQSDLITLQSINWRNFADGWPNLYINSAHDIRGQHVAFL 72
           QKK+VHLFYC+ECEELAR +AA+SD ITLQSINWR+FADG+PNL+IN+AHDIRGQHVAFL
Sbjct: 24  QKKKVHLFYCLECEELARNIAAESDHITLQSINWRSFADGFPNLFINNAHDIRGQHVAFL 83

Query: 73  ASFSSPGVIFEQISVIYALPRLFVASFTLVLPFFPTGSFERMEEEGDVATAFTMARILSN 132
           ASFSSP VIFEQISVIY LPRLFVASFTLVLPFFPTGSFERMEEEGDVATAFTMARI+SN
Sbjct: 84  ASFSSPAVIFEQISVIYLLPRLFVASFTLVLPFFPTGSFERMEEEGDVATAFTMARIVSN 143

Query: 133 IPTSRGGPTSLVIYDIHALQERFYFSDHVLPLFETGIPLLKQRLHQLPDANNLL 186
           IP SRGGPTS+VIYDIHALQERFYF+D VLPLFETGIPLL +RL QLP+   ++
Sbjct: 144 IPISRGGPTSVVIYDIHALQERFYFADQVLPLFETGIPLLTKRLQQLPETEKVI 197

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 6

EC: .

EC: 1

>sp|Q6ZFT5|KPRS4_ORYSJ Ribose-phosphate pyrophosphokinase 4 OS=Oryza sativa subsp. japonica GN=Os02g0714600 PE=2 SV=1

 Score =  280 bits (715), Expect = 6e-75,   Method: Compositional matrix adjust.
 Identities = 144/172 (83%), Positives = 158/172 (91%)

Query: 14  KKQVHLFYCVECEELARKVAAQSDLITLQSINWRNFADGWPNLYINSAHDIRGQHVAFLA 73
           KKQ++LFYC ECEELA KVAA SD I LQSINWR+F DG+PNL+IN+AHDIRGQHVAFLA
Sbjct: 12  KKQINLFYCSECEELALKVAASSDTIHLQSINWRSFDDGFPNLFINNAHDIRGQHVAFLA 71

Query: 74  SFSSPGVIFEQISVIYALPRLFVASFTLVLPFFPTGSFERMEEEGDVATAFTMARILSNI 133
           SFSSP VIFEQISVI+ALP+LF+ASFTLVLPFFPTGSFER+EEEGDVATAFT+ARILS I
Sbjct: 72  SFSSPSVIFEQISVIFALPKLFIASFTLVLPFFPTGSFERVEEEGDVATAFTLARILSMI 131

Query: 134 PTSRGGPTSLVIYDIHALQERFYFSDHVLPLFETGIPLLKQRLHQLPDANNL 185
           P SRGGPTS+VIYDIHALQERFYF D VLP FETGIPLL QRL QLPDA+N+
Sbjct: 132 PKSRGGPTSVVIYDIHALQERFYFGDDVLPCFETGIPLLLQRLRQLPDADNI 183

Oryza sativa subsp. japonica (taxid: 39947)

EC: 2

EC: .

EC: 7

EC: .

EC: 6

EC: .

EC: 1

>sp|Q9XGA0|KPRS3_SPIOL Ribose-phosphate pyrophosphokinase 3, mitochondrial OS=Spinacia oleracea GN=PRS3 PE=2 SV=1

 Score =  270 bits (690), Expect = 5e-72,   Method: Compositional matrix adjust.
 Identities = 127/171 (74%), Positives = 152/171 (88%)

Query: 15  KQVHLFYCVECEELARKVAAQSDLITLQSINWRNFADGWPNLYINSAHDIRGQHVAFLAS 74
           K+V LFYC E + LA ++AAQSD I L+SI+WR F DG+PNL+I++A  IRG+HVAFLAS
Sbjct: 94  KKVCLFYCPETKALAERIAAQSDAIQLRSISWRTFEDGFPNLFISNAQGIRGKHVAFLAS 153

Query: 75  FSSPGVIFEQISVIYALPRLFVASFTLVLPFFPTGSFERMEEEGDVATAFTMARILSNIP 134
           FSSPGVIFEQ+SVIYALP+LFVASF LVLPFFPTG+ ERME+EGDVATAFT+ARILSNIP
Sbjct: 154 FSSPGVIFEQLSVIYALPKLFVASFKLVLPFFPTGTSERMEDEGDVATAFTLARILSNIP 213

Query: 135 TSRGGPTSLVIYDIHALQERFYFSDHVLPLFETGIPLLKQRLHQLPDANNL 185
            SR GPTSLV +DIHALQERFYF D++LP FE+GIPLLK++L QLPD++N+
Sbjct: 214 ISREGPTSLVTFDIHALQERFYFGDNILPCFESGIPLLKKKLQQLPDSDNI 264

Spinacia oleracea (taxid: 3562)

EC: 2

EC: .

EC: 7

EC: .

EC: 6

EC: .

EC: 1

>sp|Q8S2E5|KPRS3_ORYSJ Ribose-phosphate pyrophosphokinase 3, chloroplastic OS=Oryza sativa subsp. japonica GN=Os01g0723600 PE=2 SV=1

 Score =  270 bits (690), Expect = 6e-72,   Method: Compositional matrix adjust.
 Identities = 126/171 (73%), Positives = 152/171 (88%)

Query: 15  KQVHLFYCVECEELARKVAAQSDLITLQSINWRNFADGWPNLYINSAHDIRGQHVAFLAS 74
           K V LF+C E  ELA +V A++D I L+SI+WR FADG+PNL+I++AH IRGQHVAFLAS
Sbjct: 97  KNVLLFHCEEMRELAEQVVARNDDIELRSISWRTFADGFPNLFISNAHTIRGQHVAFLAS 156

Query: 75  FSSPGVIFEQISVIYALPRLFVASFTLVLPFFPTGSFERMEEEGDVATAFTMARILSNIP 134
           FSSP VIFEQ+S+IYALP+LF++SFTL+LPFFPTG+ ERME+EGDVATAFT+ARILSNIP
Sbjct: 157 FSSPSVIFEQLSIIYALPKLFISSFTLILPFFPTGTSERMEDEGDVATAFTLARILSNIP 216

Query: 135 TSRGGPTSLVIYDIHALQERFYFSDHVLPLFETGIPLLKQRLHQLPDANNL 185
            SRGGP+SLVI+DIHALQERFYF D VLP FE+GIPLLK RL +LPD++N+
Sbjct: 217 ISRGGPSSLVIFDIHALQERFYFGDSVLPCFESGIPLLKSRLQELPDSDNI 267

Oryza sativa subsp. japonica (taxid: 39947)

EC: 2

EC: .

EC: 7

EC: .

EC: 6

EC: .

EC: 1

>sp|Q93Z66|KPRS3_ARATH Ribose-phosphate pyrophosphokinase 3, chloroplastic OS=Arabidopsis thaliana GN=PRS3 PE=2 SV=1

 Score =  267 bits (683), Expect = 4e-71,   Method: Compositional matrix adjust.
 Identities = 125/178 (70%), Positives = 150/178 (84%)

Query: 8   KAKKSQKKQVHLFYCVECEELARKVAAQSDLITLQSINWRNFADGWPNLYINSAHDIRGQ 67
           ++     K+V LF+  E  +LA ++ A+SD I L+SINW+ F DG+PNL+I +A  IRGQ
Sbjct: 92  ESGSKSSKRVCLFHSDETRDLAERIVAKSDCIELRSINWKKFDDGFPNLFIQNAQGIRGQ 151

Query: 68  HVAFLASFSSPGVIFEQISVIYALPRLFVASFTLVLPFFPTGSFERMEEEGDVATAFTMA 127
           HVAFLASFSSP VIFEQ+SVIYALP+LFV+SFTLVLPFFPTG+ ERME+EGDVATAFT+A
Sbjct: 152 HVAFLASFSSPAVIFEQLSVIYALPKLFVSSFTLVLPFFPTGTSERMEDEGDVATAFTLA 211

Query: 128 RILSNIPTSRGGPTSLVIYDIHALQERFYFSDHVLPLFETGIPLLKQRLHQLPDANNL 185
           RILSNIPTSRGGPTSLV +DIHALQERFYF D +LP FE+GIPLLK RL  LPD++N+
Sbjct: 212 RILSNIPTSRGGPTSLVTFDIHALQERFYFGDTILPCFESGIPLLKSRLQSLPDSDNI 269

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 6

EC: .

EC: 1

>sp|Q8P137|KPRS2_STRP8 Ribose-phosphate pyrophosphokinase 2 OS=Streptococcus pyogenes serotype M18 (strain MGAS8232) GN=prs2 PE=3 SV=1

 Score = 58.5 bits (140), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 48/167 (28%), Positives = 82/167 (49%), Gaps = 12/167 (7%)

Query: 15  KQVHLFYCVECEELARKVAAQSDLITLQSINWRNFADGWPNLYINSAHDIRGQHVAFLAS 74
           KQ+ LF       +A K+A  +  I L  ++ R F+DG   + IN    +RG H+  + S
Sbjct: 8   KQIKLFSLTSNLPIAEKIAKAAG-IPLGKMSSRQFSDG--EIMINIEETVRGDHIYIIQS 64

Query: 75  FSSP--GVIFEQISVIYALPRLFVASFTLVLPFFPTGSFERMEEEGDVATAFTMARILSN 132
            S P    ++E + +I A  R    +  +VLP+F     +R+ +  +  TA  +A +L  
Sbjct: 65  TSFPVNDNLWELLIMIDACKRASANTVNIVLPYFGYSRQDRVAKPREPITAKLVANML-- 122

Query: 133 IPTSRGGPTSLVIYDIHALQERFYFSDHVLPLFETGIPLLKQRLHQL 179
              ++ G   +V  D+HA+Q + +F   V  LF   +PL  +R  +L
Sbjct: 123 ---TKAGIDRVVTLDLHAVQVQGFFDIPVDNLFT--VPLFAERYSKL 164

Streptococcus pyogenes serotype M18 (taxid: 301451)

EC: 2

EC: .

EC: 7

EC: .

EC: 6

EC: .

EC: 1

>sp|Q8DZK4|KPRS2_STRA5 Ribose-phosphate pyrophosphokinase 2 OS=Streptococcus agalactiae serotype V (strain ATCC BAA-611 / 2603 V/R) GN=prs2 PE=3 SV=1

 Score = 55.8 bits (133), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 47/173 (27%), Positives = 84/173 (48%), Gaps = 12/173 (6%)

Query: 9   AKKSQKKQVHLFYCVECEELARKVAAQSDLITLQSINWRNFADGWPNLYINSAHDIRGQH 68
           A++   KQ+ LF      E+A K+ +Q+  I L  ++ R F+DG   + IN    +RG  
Sbjct: 2   AEQYADKQIKLFSLTANREIAEKI-SQASGIPLGKMSSRQFSDG--EIMINIEETVRGDD 58

Query: 69  VAFLASFSSP--GVIFEQISVIYALPRLFVASFTLVLPFFPTGSFERMEEEGDVATAFTM 126
           +  + S S P    ++E + +I A  R    +  +V+P+F     +R+    +  TA  +
Sbjct: 59  IYIIQSTSFPVNDNLWELLIMIDACKRASANTVNIVVPYFGYSRQDRIAASREPITAKLV 118

Query: 127 ARILSNIPTSRGGPTSLVIYDIHALQERFYFSDHVLPLFETGIPLLKQRLHQL 179
           A +L      + G   ++  D+HA+Q + +F   V  LF   +PL  +  +QL
Sbjct: 119 ANML-----VKAGVDRVLTLDLHAVQVQGFFDIPVDNLFT--VPLFAEHYNQL 164

Streptococcus agalactiae serotype V (taxid: 216466)

EC: 2

EC: .

EC: 7

EC: .

EC: 6

EC: .

EC: 1

>sp|Q8E568|KPRS2_STRA3 Ribose-phosphate pyrophosphokinase 2 OS=Streptococcus agalactiae serotype III (strain NEM316) GN=prs2 PE=3 SV=1

 Score = 55.8 bits (133), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 47/173 (27%), Positives = 84/173 (48%), Gaps = 12/173 (6%)

Query: 9   AKKSQKKQVHLFYCVECEELARKVAAQSDLITLQSINWRNFADGWPNLYINSAHDIRGQH 68
           A++   KQ+ LF      E+A K+ +Q+  I L  ++ R F+DG   + IN    +RG  
Sbjct: 2   AEQYADKQIKLFSLTANREIAEKI-SQASGIPLGKMSSRQFSDG--EIMINIEETVRGDD 58

Query: 69  VAFLASFSSP--GVIFEQISVIYALPRLFVASFTLVLPFFPTGSFERMEEEGDVATAFTM 126
           +  + S S P    ++E + +I A  R    +  +V+P+F     +R+    +  TA  +
Sbjct: 59  IYIIQSTSFPVNDNLWELLIMIDACKRASANTVNIVVPYFGYSRQDRIAASREPITAKLV 118

Query: 127 ARILSNIPTSRGGPTSLVIYDIHALQERFYFSDHVLPLFETGIPLLKQRLHQL 179
           A +L      + G   ++  D+HA+Q + +F   V  LF   +PL  +  +QL
Sbjct: 119 ANML-----VKAGVDRVLTLDLHAVQVQGFFDIPVDNLFT--VPLFAEHYNQL 164

Streptococcus agalactiae serotype III (taxid: 216495)

EC: 2

EC: .

EC: 7

EC: .

EC: 6

EC: .

EC: 1

>sp|Q8E2H0|KPRS1_STRA5 Ribose-phosphate pyrophosphokinase 1 OS=Streptococcus agalactiae serotype V (strain ATCC BAA-611 / 2603 V/R) GN=prs1 PE=3 SV=1

 Score = 54.7 bits (130), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 48/162 (29%), Positives = 77/162 (47%), Gaps = 18/162 (11%)

Query: 16  QVHLFYCVECEELARKVAAQSDLITLQSINWRNFADGWPNLYINSAHDIRGQHVAFLASF 75
            + LF     +ELA+KV+ Q+  I L     R F+DG   + +N    IRG HV  L S 
Sbjct: 5   NLKLFALSSNKELAKKVS-QTIGIPLGQSTVRQFSDG--EIQVNIEESIRGHHVFILQST 61

Query: 76  SSP--GVIFEQISVIYALPRLFVASFTLVLPFFPTGSFERMEEEGDVATAFTMARILSNI 133
           SSP    + E + ++ AL R    S ++V+P++     +R     +  T+  +A +L   
Sbjct: 62  SSPVNDNLMEILIMVDALKRASAESVSVVMPYYGYARQDRKARSREPITSKLVANML--- 118

Query: 134 PTSRGGPTSLVIYDIHALQERFYFS---DHVLPLFETGIPLL 172
                G   L+  D+HA Q + +F    DH++     G PL+
Sbjct: 119 --EVAGVDRLLTVDLHAAQIQGFFDIPVDHLM-----GAPLI 153

Streptococcus agalactiae serotype V (taxid: 216466)

EC: 2

EC: .

EC: 7

EC: .

EC: 6

EC: .

EC: 1

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	218
224085342	328	predicted protein [Populus trichocarpa]	0.839	0.557	0.830	7e-85
62286957	318	RecName: Full=Ribose-phosphate pyrophosp	0.811	0.556	0.864	4e-84
15228027	337	ribose-phosphate pyrophosphokinase 4 [Ar	0.798	0.516	0.850	1e-83
297824257	337	ribose-phosphate pyrophosphokinase 4 [Ar	0.798	0.516	0.844	3e-83
224062736	327	predicted protein [Populus trichocarpa]	0.844	0.562	0.831	4e-83
359485140	326	PREDICTED: ribose-phosphate pyrophosphok	0.811	0.542	0.847	2e-82
296086310	318	unnamed protein product [Vitis vinifera]	0.811	0.556	0.847	2e-82
255582599	326	Ribose-phosphate pyrophosphokinase, puta	0.779	0.521	0.864	4e-81
326525487	328	predicted protein [Hordeum vulgare subsp	0.788	0.524	0.831	3e-80
449444763	317	PREDICTED: ribose-phosphate pyrophosphok	0.807	0.555	0.818	1e-79

>gi|224085342|ref|XP_002307546.1| predicted protein [Populus trichocarpa] gi|222856995|gb|EEE94542.1| predicted protein [Populus trichocarpa]

 Score =  318 bits (816), Expect = 7e-85,   Method: Compositional matrix adjust.
 Identities = 152/183 (83%), Positives = 166/183 (90%)

Query: 3   DKREIKAKKSQKKQVHLFYCVECEELARKVAAQSDLITLQSINWRNFADGWPNLYINSAH 62
           DK E + ++ + KQVHLFYC+E EELARKVA  SDLITLQSINWRNF DG+PNL+IN+A 
Sbjct: 4   DKVETQNQQQKHKQVHLFYCLESEELARKVAGHSDLITLQSINWRNFDDGFPNLFINNAE 63

Query: 63  DIRGQHVAFLASFSSPGVIFEQISVIYALPRLFVASFTLVLPFFPTGSFERMEEEGDVAT 122
           D+RGQHVAFLA FSSPGVIFEQ+SVIYALPRLF ASFTLVLPFFPTGSFERMEEEGDVAT
Sbjct: 64  DLRGQHVAFLACFSSPGVIFEQLSVIYALPRLFAASFTLVLPFFPTGSFERMEEEGDVAT 123

Query: 123 AFTMARILSNIPTSRGGPTSLVIYDIHALQERFYFSDHVLPLFETGIPLLKQRLHQLPDA 182
           AFTMARILSNIP SRGGPTSLVIYDIHALQERFYF D VLPLF TGIPLLKQRLHQLP++
Sbjct: 124 AFTMARILSNIPISRGGPTSLVIYDIHALQERFYFGDQVLPLFVTGIPLLKQRLHQLPES 183

Query: 183 NNL 185
           + +
Sbjct: 184 DKI 186

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|62286957|sp|Q9XGA1.1|KPRS4_SPIOL RecName: Full=Ribose-phosphate pyrophosphokinase 4; AltName: Full=Phosphoribosyl pyrophosphate synthase 4 gi|4902879|emb|CAB43602.1| phosphoribosyl pyrophosphate synthase isozyme 4 [Spinacia oleracea]

 Score =  316 bits (810), Expect = 4e-84,   Method: Compositional matrix adjust.
 Identities = 153/177 (86%), Positives = 165/177 (93%)

Query: 10  KKSQKKQVHLFYCVECEELARKVAAQSDLITLQSINWRNFADGWPNLYINSAHDIRGQHV 69
           +K   KQV LFYCVE EELARKVAAQS LITLQSINWR+F DG+PNL+IN+A DIRGQHV
Sbjct: 2   EKPNTKQVLLFYCVEAEELARKVAAQSPLITLQSINWRSFDDGFPNLFINNAQDIRGQHV 61

Query: 70  AFLASFSSPGVIFEQISVIYALPRLFVASFTLVLPFFPTGSFERMEEEGDVATAFTMARI 129
           AFLA+FSSP VIFEQ+SVIYALPRLFVASFTLVLPFFPTGSFERMEEEGDVATAFTMARI
Sbjct: 62  AFLAAFSSPAVIFEQLSVIYALPRLFVASFTLVLPFFPTGSFERMEEEGDVATAFTMARI 121

Query: 130 LSNIPTSRGGPTSLVIYDIHALQERFYFSDHVLPLFETGIPLLKQRLHQLPDANNLL 186
           LSNIP SRGGPTS+VIYDIHALQERFYFSD+VLPLFETGIPLLKQRL QLPDA+ ++
Sbjct: 122 LSNIPVSRGGPTSVVIYDIHALQERFYFSDNVLPLFETGIPLLKQRLDQLPDADKIV 178

Source: Spinacia oleracea

Species: Spinacia oleracea

Genus: Spinacia

Family: Amaranthaceae

Order: Caryophyllales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|15228027|ref|NP_181819.1| ribose-phosphate pyrophosphokinase 4 [Arabidopsis thaliana] gi|62286916|sp|Q680A5.2|KPRS4_ARATH RecName: Full=Ribose-phosphate pyrophosphokinase 4; AltName: Full=Phosphoribosyl pyrophosphate synthase 4 gi|4512664|gb|AAD21718.1| putative ribose phosphate pyrophosphokinase [Arabidopsis thaliana] gi|4902472|emb|CAB43553.1| phosphoribosyl diphosphate synthase [Arabidopsis thaliana] gi|20197872|gb|AAM15296.1| putative ribose phosphate pyrophosphokinase [Arabidopsis thaliana] gi|21593006|gb|AAM64955.1| putative ribose phosphate pyrophosphokinase [Arabidopsis thaliana] gi|22136046|gb|AAM91605.1| putative ribose phosphate pyrophosphokinase [Arabidopsis thaliana] gi|23197750|gb|AAN15402.1| putative ribose phosphate pyrophosphokinase [Arabidopsis thaliana] gi|330255092|gb|AEC10186.1| ribose-phosphate pyrophosphokinase 4 [Arabidopsis thaliana]

 Score =  315 bits (806), Expect = 1e-83,   Method: Compositional matrix adjust.
 Identities = 148/174 (85%), Positives = 163/174 (93%)

Query: 13  QKKQVHLFYCVECEELARKVAAQSDLITLQSINWRNFADGWPNLYINSAHDIRGQHVAFL 72
           QKK+VHLFYC+ECEELAR +AA+SD ITLQSINWR+FADG+PNL+IN+AHDIRGQHVAFL
Sbjct: 24  QKKKVHLFYCLECEELARNIAAESDHITLQSINWRSFADGFPNLFINNAHDIRGQHVAFL 83

Query: 73  ASFSSPGVIFEQISVIYALPRLFVASFTLVLPFFPTGSFERMEEEGDVATAFTMARILSN 132
           ASFSSP VIFEQISVIY LPRLFVASFTLVLPFFPTGSFERMEEEGDVATAFTMARI+SN
Sbjct: 84  ASFSSPAVIFEQISVIYLLPRLFVASFTLVLPFFPTGSFERMEEEGDVATAFTMARIVSN 143

Query: 133 IPTSRGGPTSLVIYDIHALQERFYFSDHVLPLFETGIPLLKQRLHQLPDANNLL 186
           IP SRGGPTS+VIYDIHALQERFYF+D VLPLFETGIPLL +RL QLP+   ++
Sbjct: 144 IPISRGGPTSVVIYDIHALQERFYFADQVLPLFETGIPLLTKRLQQLPETEKVI 197

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297824257|ref|XP_002880011.1| ribose-phosphate pyrophosphokinase 4 [Arabidopsis lyrata subsp. lyrata] gi|297325850|gb|EFH56270.1| ribose-phosphate pyrophosphokinase 4 [Arabidopsis lyrata subsp. lyrata]

 Score =  313 bits (802), Expect = 3e-83,   Method: Compositional matrix adjust.
 Identities = 147/174 (84%), Positives = 163/174 (93%)

Query: 13  QKKQVHLFYCVECEELARKVAAQSDLITLQSINWRNFADGWPNLYINSAHDIRGQHVAFL 72
           QKK+VHLFYC+ECEELAR +AA+SD ITLQSINWR+FADG+PNL+IN+AH+IRGQHVAFL
Sbjct: 24  QKKKVHLFYCLECEELARNIAAESDDITLQSINWRSFADGFPNLFINNAHEIRGQHVAFL 83

Query: 73  ASFSSPGVIFEQISVIYALPRLFVASFTLVLPFFPTGSFERMEEEGDVATAFTMARILSN 132
           ASFSSP VIFEQISVIY LPRLFVASFTLVLPFFPTGSFERMEEEGDVATAFTMARI+SN
Sbjct: 84  ASFSSPAVIFEQISVIYLLPRLFVASFTLVLPFFPTGSFERMEEEGDVATAFTMARIVSN 143

Query: 133 IPTSRGGPTSLVIYDIHALQERFYFSDHVLPLFETGIPLLKQRLHQLPDANNLL 186
           IP SRGGPTS+VIYDIHALQERFYF+D VLPLFETGIPLL +RL QLP+   ++
Sbjct: 144 IPISRGGPTSVVIYDIHALQERFYFADQVLPLFETGIPLLTKRLQQLPETEKVI 197

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224062736|ref|XP_002300881.1| predicted protein [Populus trichocarpa] gi|222842607|gb|EEE80154.1| predicted protein [Populus trichocarpa]

 Score =  313 bits (801), Expect = 4e-83,   Method: Compositional matrix adjust.
 Identities = 153/184 (83%), Positives = 171/184 (92%)

Query: 3   DKREIKAKKSQKKQVHLFYCVECEELARKVAAQSDLITLQSINWRNFADGWPNLYINSAH 62
           DK E + ++ ++KQVHLFYCVE EELAR VAA S+LITLQSINWRNF DG+PNL+IN+A 
Sbjct: 4   DKVETQQQQQKQKQVHLFYCVESEELARNVAAHSELITLQSINWRNFDDGFPNLFINNAE 63

Query: 63  DIRGQHVAFLASFSSPGVIFEQISVIYALPRLFVASFTLVLPFFPTGSFERMEEEGDVAT 122
           ++RGQHVAFLASFSSPGVIFEQ+SVIYALPRLFVASF+LVLPFFPTGSFERMEEEGDVAT
Sbjct: 64  NLRGQHVAFLASFSSPGVIFEQLSVIYALPRLFVASFSLVLPFFPTGSFERMEEEGDVAT 123

Query: 123 AFTMARILSNIPTSRGGPTSLVIYDIHALQERFYFSDHVLPLFETGIPLLKQRLHQLPDA 182
           AFTMARILSNIP SRGGPTSLVIYDIHALQERFYF DHVLPLF TGIPLLKQRLHQLP++
Sbjct: 124 AFTMARILSNIPISRGGPTSLVIYDIHALQERFYFGDHVLPLFVTGIPLLKQRLHQLPES 183

Query: 183 NNLL 186
           + ++
Sbjct: 184 DKIV 187

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359485140|ref|XP_002279775.2| PREDICTED: ribose-phosphate pyrophosphokinase 4-like [Vitis vinifera]

 Score =  311 bits (796), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 150/177 (84%), Positives = 164/177 (92%)

Query: 10  KKSQKKQVHLFYCVECEELARKVAAQSDLITLQSINWRNFADGWPNLYINSAHDIRGQHV 69
           +K  +KQ+ LFYC+E E+LARKVA QS LI LQSINWR+F DG+PNL+IN+A  IRGQHV
Sbjct: 10  EKPNEKQILLFYCMESEDLARKVAEQSPLIQLQSINWRSFDDGFPNLFINNAQYIRGQHV 69

Query: 70  AFLASFSSPGVIFEQISVIYALPRLFVASFTLVLPFFPTGSFERMEEEGDVATAFTMARI 129
           AFLASFSSP VIFEQ+SVI+ALPRLFVASFTLVLPFFPTGSFERMEEEGDVATAFTMARI
Sbjct: 70  AFLASFSSPAVIFEQLSVIFALPRLFVASFTLVLPFFPTGSFERMEEEGDVATAFTMARI 129

Query: 130 LSNIPTSRGGPTSLVIYDIHALQERFYFSDHVLPLFETGIPLLKQRLHQLPDANNLL 186
           LSNIP SRGGPTSLVIYDIHALQERFYFSDHVLPLFETGIPLLKQRLHQLPD +N++
Sbjct: 130 LSNIPISRGGPTSLVIYDIHALQERFYFSDHVLPLFETGIPLLKQRLHQLPDTDNVV 186

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|296086310|emb|CBI31751.3| unnamed protein product [Vitis vinifera]

 Score =  310 bits (795), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 150/177 (84%), Positives = 164/177 (92%)

Query: 10  KKSQKKQVHLFYCVECEELARKVAAQSDLITLQSINWRNFADGWPNLYINSAHDIRGQHV 69
           +K  +KQ+ LFYC+E E+LARKVA QS LI LQSINWR+F DG+PNL+IN+A  IRGQHV
Sbjct: 2   EKPNEKQILLFYCMESEDLARKVAEQSPLIQLQSINWRSFDDGFPNLFINNAQYIRGQHV 61

Query: 70  AFLASFSSPGVIFEQISVIYALPRLFVASFTLVLPFFPTGSFERMEEEGDVATAFTMARI 129
           AFLASFSSP VIFEQ+SVI+ALPRLFVASFTLVLPFFPTGSFERMEEEGDVATAFTMARI
Sbjct: 62  AFLASFSSPAVIFEQLSVIFALPRLFVASFTLVLPFFPTGSFERMEEEGDVATAFTMARI 121

Query: 130 LSNIPTSRGGPTSLVIYDIHALQERFYFSDHVLPLFETGIPLLKQRLHQLPDANNLL 186
           LSNIP SRGGPTSLVIYDIHALQERFYFSDHVLPLFETGIPLLKQRLHQLPD +N++
Sbjct: 122 LSNIPISRGGPTSLVIYDIHALQERFYFSDHVLPLFETGIPLLKQRLHQLPDTDNVV 178

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255582599|ref|XP_002532081.1| Ribose-phosphate pyrophosphokinase, putative [Ricinus communis] gi|223528241|gb|EEF30295.1| Ribose-phosphate pyrophosphokinase, putative [Ricinus communis]

 Score =  306 bits (783), Expect = 4e-81,   Method: Compositional matrix adjust.
 Identities = 147/170 (86%), Positives = 159/170 (93%)

Query: 17  VHLFYCVECEELARKVAAQSDLITLQSINWRNFADGWPNLYINSAHDIRGQHVAFLASFS 76
           VHLFYC E EELA KVAA SDLITLQSINWRNF DG+PNL+IN+A ++RGQHVAFLA+FS
Sbjct: 17  VHLFYCDETEELAIKVAAHSDLITLQSINWRNFDDGFPNLFINNAQEMRGQHVAFLAAFS 76

Query: 77  SPGVIFEQISVIYALPRLFVASFTLVLPFFPTGSFERMEEEGDVATAFTMARILSNIPTS 136
           SP VIFEQ+SVIYALPRLFVASFTLVLPFFPTGSFERMEEEGDVATAFTMARILSNIP S
Sbjct: 77  SPAVIFEQLSVIYALPRLFVASFTLVLPFFPTGSFERMEEEGDVATAFTMARILSNIPIS 136

Query: 137 RGGPTSLVIYDIHALQERFYFSDHVLPLFETGIPLLKQRLHQLPDANNLL 186
           RGGPTSLVIYDIHALQERFYF D+VLPLFETGIPLLKQRLHQL D++ ++
Sbjct: 137 RGGPTSLVIYDIHALQERFYFGDNVLPLFETGIPLLKQRLHQLSDSDKIV 186

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|326525487|dbj|BAJ88790.1| predicted protein [Hordeum vulgare subsp. vulgare]

 Score =  303 bits (777), Expect = 3e-80,   Method: Compositional matrix adjust.
 Identities = 143/172 (83%), Positives = 158/172 (91%)

Query: 14  KKQVHLFYCVECEELARKVAAQSDLITLQSINWRNFADGWPNLYINSAHDIRGQHVAFLA 73
           KKQ++LFYC ECEELA KVAA SD I LQSINWRNF DG+PNL+IN+AHDIRGQHVAFLA
Sbjct: 15  KKQINLFYCAECEELALKVAAASDAIQLQSINWRNFPDGFPNLFINNAHDIRGQHVAFLA 74

Query: 74  SFSSPGVIFEQISVIYALPRLFVASFTLVLPFFPTGSFERMEEEGDVATAFTMARILSNI 133
           SFSSP +IFEQISVI+ALP+LF+ASFTLVLPFFPTG+FER+EEEGDVATAFT+ARILS I
Sbjct: 75  SFSSPAIIFEQISVIFALPKLFIASFTLVLPFFPTGTFERVEEEGDVATAFTLARILSMI 134

Query: 134 PTSRGGPTSLVIYDIHALQERFYFSDHVLPLFETGIPLLKQRLHQLPDANNL 185
           P SRGGPTS+VIYDIHALQERFYF D VLP FETGIPLL QRL QLPDA+N+
Sbjct: 135 PKSRGGPTSVVIYDIHALQERFYFGDDVLPCFETGIPLLLQRLSQLPDADNV 186

Source: Hordeum vulgare subsp. vulgare

Species: Hordeum vulgare

Genus: Hordeum

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449444763|ref|XP_004140143.1| PREDICTED: ribose-phosphate pyrophosphokinase 4-like [Cucumis sativus]

 Score =  301 bits (772), Expect = 1e-79,   Method: Compositional matrix adjust.
 Identities = 144/176 (81%), Positives = 158/176 (89%)

Query: 11  KSQKKQVHLFYCVECEELARKVAAQSDLITLQSINWRNFADGWPNLYINSAHDIRGQHVA 70
           K  KK + LFYC ECEELA+KVAAQSD ITLQ+I WR F DG+PN+YIN+A ++RG HVA
Sbjct: 3   KPPKKHIFLFYCEECEELAQKVAAQSDSITLQTIKWRTFDDGFPNIYINNAQELRGNHVA 62

Query: 71  FLASFSSPGVIFEQISVIYALPRLFVASFTLVLPFFPTGSFERMEEEGDVATAFTMARIL 130
           FLASFS  G IFEQISVIY LPRLF ASFTLVLPFFPTGSFERMEEEGDVATAFTMARIL
Sbjct: 63  FLASFSHQGAIFEQISVIYNLPRLFAASFTLVLPFFPTGSFERMEEEGDVATAFTMARIL 122

Query: 131 SNIPTSRGGPTSLVIYDIHALQERFYFSDHVLPLFETGIPLLKQRLHQLPDANNLL 186
           SNIP SRGGPTS+VIYDIHALQERFYF D+VLPLFETGIPLLKQRLHQLPDA++++
Sbjct: 123 SNIPISRGGPTSVVIYDIHALQERFYFGDNVLPLFETGIPLLKQRLHQLPDADDVV 178

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	218
TAIR|locus:2045590	337	AT2G42910 [Arabidopsis thalian	0.798	0.516	0.850	1.3e-77
TAIR|locus:2019973	411	PRS3 "phosphoribosyl pyrophosp	0.798	0.423	0.725	1.4e-64
UNIPROTKB|Q9KQ22	314	prs "Ribose-phosphate pyrophos	0.674	0.468	0.278	0.00042
TIGR_CMR|VC_2183	314	VC_2183 "ribose-phosphate pyro	0.674	0.468	0.278	0.00042

TAIR|locus:2045590 AT2G42910 [Arabidopsis thaliana (taxid:3702)]

 Score = 781 (280.0 bits), Expect = 1.3e-77, P = 1.3e-77
 Identities = 148/174 (85%), Positives = 163/174 (93%)

Query:    13 QKKQVHLFYCVECEELARKVAAQSDLITLQSINWRNFADGWPNLYINSAHDIRGQHVAFL 72
             QKK+VHLFYC+ECEELAR +AA+SD ITLQSINWR+FADG+PNL+IN+AHDIRGQHVAFL
Sbjct:    24 QKKKVHLFYCLECEELARNIAAESDHITLQSINWRSFADGFPNLFINNAHDIRGQHVAFL 83

Query:    73 ASFSSPGVIFEQISVIYALPRLFVASFTLVLPFFPTGSFERMEEEGDVATAFTMARILSN 132
             ASFSSP VIFEQISVIY LPRLFVASFTLVLPFFPTGSFERMEEEGDVATAFTMARI+SN
Sbjct:    84 ASFSSPAVIFEQISVIYLLPRLFVASFTLVLPFFPTGSFERMEEEGDVATAFTMARIVSN 143

Query:   133 IPTSRGGPTSLVIYDIHALQERFYFSDHVLPLFETGIPLLKQRLHQLPDANNLL 186
             IP SRGGPTS+VIYDIHALQERFYF+D VLPLFETGIPLL +RL QLP+   ++
Sbjct:   144 IPISRGGPTSVVIYDIHALQERFYFADQVLPLFETGIPLLTKRLQQLPETEKVI 197

GO:0000287 "magnesium ion binding" evidence=IEA

GO:0004749 "ribose phosphate diphosphokinase activity" evidence=IEA;ISS

GO:0005737 "cytoplasm" evidence=ISM;IDA

GO:0009116 "nucleoside metabolic process" evidence=IEA

GO:0009165 "nucleotide biosynthetic process" evidence=IEA;ISS

GO:0005886 "plasma membrane" evidence=IDA

GO:0005829 "cytosol" evidence=IDA

GO:0009506 "plasmodesma" evidence=IDA

GO:0006783 "heme biosynthetic process" evidence=RCA

GO:0009220 "pyrimidine ribonucleotide biosynthetic process" evidence=RCA

TAIR|locus:2019973 PRS3 "phosphoribosyl pyrophosphate (PRPP) synthase 3" [Arabidopsis thaliana (taxid:3702)]

 Score = 658 (236.7 bits), Expect = 1.4e-64, P = 1.4e-64
 Identities = 127/175 (72%), Positives = 150/175 (85%)

Query:    11 KSQKKQVHLFYCVECEELARKVAAQSDLITLQSINWRNFADGWPNLYINSAHDIRGQHVA 70
             KS K+ V LF+  E  +LA ++ A+SD I L+SINW+ F DG+PNL+I +A  IRGQHVA
Sbjct:    96 KSSKR-VCLFHSDETRDLAERIVAKSDCIELRSINWKKFDDGFPNLFIQNAQGIRGQHVA 154

Query:    71 FLASFSSPGVIFEQISVIYALPRLFVASFTLVLPFFPTGSFERMEEEGDVATAFTMARIL 130
             FLASFSSP VIFEQ+SVIYALP+LFV+SFTLVLPFFPTG+ ERME+EGDVATAFT+ARIL
Sbjct:   155 FLASFSSPAVIFEQLSVIYALPKLFVSSFTLVLPFFPTGTSERMEDEGDVATAFTLARIL 214

Query:   131 SNIPTSRGGPTSLVIYDIHALQERFYFSDHVLPLFETGIPLLKQRLHQLPDANNL 185
             SNIPTSRGGPTSLV +DIHALQERFYF D +LP FE+GIPLLK RL  LPD++N+
Sbjct:   215 SNIPTSRGGPTSLVTFDIHALQERFYFGDTILPCFESGIPLLKSRLQSLPDSDNI 269

GO:0000287 "magnesium ion binding" evidence=IEA

GO:0004749 "ribose phosphate diphosphokinase activity" evidence=IEA;ISS

GO:0009116 "nucleoside metabolic process" evidence=IEA

GO:0009165 "nucleotide biosynthetic process" evidence=IEA;ISS

GO:0009507 "chloroplast" evidence=ISM

GO:0006783 "heme biosynthetic process" evidence=RCA

UNIPROTKB|Q9KQ22 prs "Ribose-phosphate pyrophosphokinase" [Vibrio cholerae O1 biovar El Tor str. N16961 (taxid:243277)]

 Score = 111 (44.1 bits), Expect = 0.00042, P = 0.00042
 Identities = 44/158 (27%), Positives = 72/158 (45%)

Query:    27 ELARKVAAQSDLITLQSINWRNFADGWPNLYINSAHDIRGQHVAFLASFSSP--GVIFEQ 84
             ELA+++A +   I+L       F+DG   + IN   ++RG  V  + S  +P    + E 
Sbjct:    14 ELAQRIADRL-YISLGDATVSRFSDGEVAVQINE--NVRGSDVFIIQSTCAPTNDNLMEL 70

Query:    85 ISVIYALPRLFVASFTLVLPFFPTGSFERMEEEGDVA-TAFTMARILSNIPTSRGGPTSL 143
             + +I A+ R      T V+P+F     +R      V  TA  +A  LSN+   R     +
Sbjct:    71 VVMIDAMRRASAGRITAVIPYFGYARQDRRVRSARVPITAKVVADFLSNVGVDR-----V 125

Query:   144 VIYDIHALQERFYFSDHVLPLFETGIPLLKQRLHQLPD 181
             +  D+HA Q + +F   V  +F T + L   +   L D
Sbjct:   126 LTIDLHAEQIQGFFDVPVDNIFGTPVLLEDMKARNLED 163

GO:0004749 "ribose phosphate diphosphokinase activity" evidence=ISS

GO:0009152 "purine ribonucleotide biosynthetic process" evidence=ISS

TIGR_CMR|VC_2183 VC_2183 "ribose-phosphate pyrophosphokinase" [Vibrio cholerae O1 biovar El Tor (taxid:686)]

 Score = 111 (44.1 bits), Expect = 0.00042, P = 0.00042
 Identities = 44/158 (27%), Positives = 72/158 (45%)

Query:    27 ELARKVAAQSDLITLQSINWRNFADGWPNLYINSAHDIRGQHVAFLASFSSP--GVIFEQ 84
             ELA+++A +   I+L       F+DG   + IN   ++RG  V  + S  +P    + E 
Sbjct:    14 ELAQRIADRL-YISLGDATVSRFSDGEVAVQINE--NVRGSDVFIIQSTCAPTNDNLMEL 70

Query:    85 ISVIYALPRLFVASFTLVLPFFPTGSFERMEEEGDVA-TAFTMARILSNIPTSRGGPTSL 143
             + +I A+ R      T V+P+F     +R      V  TA  +A  LSN+   R     +
Sbjct:    71 VVMIDAMRRASAGRITAVIPYFGYARQDRRVRSARVPITAKVVADFLSNVGVDR-----V 125

Query:   144 VIYDIHALQERFYFSDHVLPLFETGIPLLKQRLHQLPD 181
             +  D+HA Q + +F   V  +F T + L   +   L D
Sbjct:   126 LTIDLHAEQIQGFFDVPVDNIFGTPVLLEDMKARNLED 163


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.326   0.139   0.430    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      218       218   0.00091  112 3  11 22  0.44    32
                                                     32  0.39    36


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  4
  No. of states in DFA:  606 (64 KB)
  Total size of DFA:  181 KB (2104 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  20.00u 0.17s 20.17t   Elapsed:  00:00:00
  Total cpu time:  20.00u 0.17s 20.17t   Elapsed:  00:00:00
  Start:  Sat May 11 11:37:09 2013   End:  Sat May 11 11:37:09 2013

GO:0004749 "ribose phosphate diphosphokinase activity" evidence=ISS

GO:0009152 "purine ribonucleotide biosynthetic process" evidence=ISS

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q680A5	KPRS4_ARATH	2, ., 7, ., 6, ., 1	0.8505	0.7981	0.5163	yes	no
Q6ZFT5	KPRS4_ORYSJ	2, ., 7, ., 6, ., 1	0.8372	0.7889	0.5292	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	2.7.6	0.921
4th Layer	2.7.6.1	0.914

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	218
PLN02297	326	PLN02297, PLN02297, ribose-phosphate pyrophosphoki	1e-131
TIGR01251	308	TIGR01251, ribP_PPkin, ribose-phosphate pyrophosph	8e-09
COG0462	314	COG0462, PrsA, Phosphoribosylpyrophosphate synthet	6e-08
PRK02458	323	PRK02458, PRK02458, ribose-phosphate pyrophosphoki	6e-08
PRK02269	320	PRK02269, PRK02269, ribose-phosphate pyrophosphoki	4e-07
pfam13793	117	pfam13793, Pribosyltran_N, N-terminal domain of ri	1e-05
PRK03092	304	PRK03092, PRK03092, ribose-phosphate pyrophosphoki	0.002

>gnl|CDD|177934 PLN02297, PLN02297, ribose-phosphate pyrophosphokinase

 Score =  372 bits (956), Expect = e-131
 Identities = 141/184 (76%), Positives = 159/184 (86%)

Query: 1   MEDKREIKAKKSQKKQVHLFYCVECEELARKVAAQSDLITLQSINWRNFADGWPNLYINS 60
                +  + K  KKQVHLFYC E EELARK+AA+SD I L SINWR F DG+PNL+IN+
Sbjct: 1   TAAAVKRASSKKNKKQVHLFYCEETEELARKIAAESDAIELGSINWRKFPDGFPNLFINN 60

Query: 61  AHDIRGQHVAFLASFSSPGVIFEQISVIYALPRLFVASFTLVLPFFPTGSFERMEEEGDV 120
           AH IRGQHVAFLASFSSP VIFEQ+SVIYALP+LFVASFTLVLPFFPTG+ ER+E EGDV
Sbjct: 61  AHGIRGQHVAFLASFSSPAVIFEQLSVIYALPKLFVASFTLVLPFFPTGTSERVEREGDV 120

Query: 121 ATAFTMARILSNIPTSRGGPTSLVIYDIHALQERFYFSDHVLPLFETGIPLLKQRLHQLP 180
           ATAFT+ARILSNIP SRGGPTSLVI+DIHALQERFYF D+VLP FE+GIPLLK+RL QLP
Sbjct: 121 ATAFTLARILSNIPISRGGPTSLVIFDIHALQERFYFGDNVLPCFESGIPLLKKRLQQLP 180

Query: 181 DANN 184
           D++N
Sbjct: 181 DSDN 184

Length = 326

>gnl|CDD|130318 TIGR01251, ribP_PPkin, ribose-phosphate pyrophosphokinase

 Score = 54.2 bits (131), Expect = 8e-09
 Identities = 40/172 (23%), Positives = 75/172 (43%), Gaps = 21/172 (12%)

Query: 19  LFYCVECEELARKVAAQSDL-ITLQSINWRNFADGWPNLYINSAHDIRGQHVAFLASFSS 77
           +F     +ELA+KVA    L +    +  + F DG   LY+     +RG+ V  +   +S
Sbjct: 3   IFSGSSNQELAQKVAKNLGLPLGDVEV--KRFPDG--ELYVRINESVRGKDVFIIQQSTS 58

Query: 78  PGV---IFEQISVIYALPRLFVASFTLVLPFFPTGSFERMEEEGDVATAFTMARILSNIP 134
             V   + E + +I AL R    S T V+P++     ++  +  +  +A  +A +L    
Sbjct: 59  APVNDNLMELLIMIDALKRASAKSITAVIPYYGYARQDKKFKSREPISAKLVANLLETAG 118

Query: 135 TSRGGPTSLVIYDIHALQERFYFS---DHVLPLFETGIPLLKQRLHQLPDAN 183
             R     ++  D+H+ Q + +F    D++        P+L + L +    N
Sbjct: 119 ADR-----VLTVDLHSPQIQGFFDVPVDNL-----YASPVLAEYLKKKILDN 160

Alternate name: phosphoribosylpyrophosphate synthetase In some systems, close homologs lacking enzymatic activity exist and perform regulatory functions. The model is designated subfamily rather than equivalog for this reason [Purines, pyrimidines, nucleosides, and nucleotides, Purine ribonucleotide biosynthesis]. Length = 308

>gnl|CDD|223538 COG0462, PrsA, Phosphoribosylpyrophosphate synthetase [Nucleotide transport and metabolism / Amino acid transport and metabolism]

 Score = 51.8 bits (125), Expect = 6e-08
 Identities = 35/133 (26%), Positives = 61/133 (45%), Gaps = 10/133 (7%)

Query: 27  ELARKVAAQSDLITLQSINWRNFADGWPNLYINSAHDIRGQHVAFLASFSSPG--VIFEQ 84
           ELA K+A +   I L  +  + F DG   +Y+     +RG+ V  + S S P    + E 
Sbjct: 15  ELAEKIAKRLG-IPLGKVEVKRFPDG--EIYVRIEESVRGKDVFIIQSTSPPVNDNLMEL 71

Query: 85  ISVIYALPRLFVASFTLVLPFFPTGSFERMEEEGDVATAFTMARILSNIPTSRGGPTSLV 144
           + +I AL R      T V+P+F     ++  +  +  +A  +A +L        G   ++
Sbjct: 72  LIMIDALKRASAKRITAVIPYFGYARQDKAFKPREPISAKLVANLL-----ETAGADRVL 126

Query: 145 IYDIHALQERFYF 157
             D+HA Q + +F
Sbjct: 127 TVDLHAPQIQGFF 139

Length = 314

>gnl|CDD|235039 PRK02458, PRK02458, ribose-phosphate pyrophosphokinase; Provisional

 Score = 51.7 bits (124), Expect = 6e-08
 Identities = 44/173 (25%), Positives = 81/173 (46%), Gaps = 12/173 (6%)

Query: 9   AKKSQKKQVHLFYCVECEELARKVAAQSDLITLQSINWRNFADGWPNLYINSAHDIRGQH 68
            ++   KQ+ LF      E+A K+A  +  + L  ++ R F+DG   + IN    +RG  
Sbjct: 2   TERYADKQIKLFSLNSNLEIAEKIAQAAG-VPLGKLSSRQFSDG--EIMINIEESVRGDD 58

Query: 69  VAFLASFSSP--GVIFEQISVIYALPRLFVASFTLVLPFFPTGSFERMEEEGDVATAFTM 126
           +  + S S P    ++E + +I A  R    +  +VLP+F     +R+ +  +  TA  +
Sbjct: 59  IYIIQSTSFPVNDHLWELLIMIDACKRASANTVNVVLPYFGYARQDRIAKPREPITAKLV 118

Query: 127 ARILSNIPTSRGGPTSLVIYDIHALQERFYFSDHVLPLFETGIPLLKQRLHQL 179
           A +L      + G   ++  D+HA+Q + +F   V  LF   +PL  +   + 
Sbjct: 119 ANMLV-----KAGVDRVLTLDLHAVQVQGFFDIPVDNLFT--VPLFAKHYCKK 164

Length = 323

>gnl|CDD|167353 PRK02269, PRK02269, ribose-phosphate pyrophosphokinase; Provisional

 Score = 49.0 bits (117), Expect = 4e-07
 Identities = 48/159 (30%), Positives = 74/159 (46%), Gaps = 18/159 (11%)

Query: 19  LFYCVECEELARKVAAQSDLITLQSINWRNFADGWPNLYINSAHDIRGQHVAFLASFSSP 78
           LF     +ELA KVA +   I L   + R F+DG   + +N    IRG HV  L S SSP
Sbjct: 8   LFALSSNKELAEKVAQEIG-IELGKSSVRQFSDG--EIQVNIEESIRGHHVFILQSTSSP 64

Query: 79  --GVIFEQISVIYALPRLFVASFTLVLPFFPTGSFERMEEEGDVATAFTMARILSNIPTS 136
               + E + ++ AL R    S  +V+P++     +R     +  T+  +A +L      
Sbjct: 65  VNDNLMEILIMVDALKRASAESINVVMPYYGYARQDRKARSREPITSKLVANMLEVAGVD 124

Query: 137 RGGPTSLVIYDIHALQERFYFS---DHVLPLFETGIPLL 172
           R     L+  D+HA Q + +F    DH++     G PL+
Sbjct: 125 R-----LLTVDLHAAQIQGFFDIPVDHLM-----GAPLI 153

Length = 320

>gnl|CDD|222383 pfam13793, Pribosyltran_N, N-terminal domain of ribose phosphate pyrophosphokinase

 Score = 42.4 bits (101), Expect = 1e-05
 Identities = 26/86 (30%), Positives = 38/86 (44%), Gaps = 7/86 (8%)

Query: 25  CEELARKVAAQSDLITLQSINWRNFADGWPNLYINSAHDIRGQHVAFLASFSSPGV---I 81
             ELA K+A     I L       F+DG   +Y+     +RG+ V  + S   P V   +
Sbjct: 9   NPELAEKIAKYLG-IPLGKAEVSRFSDG--EIYVRIEESVRGKDVFIIQSTCPP-VNDNL 64

Query: 82  FEQISVIYALPRLFVASFTLVLPFFP 107
            E + +I AL R      T V+P+F 
Sbjct: 65  MELLIMIDALKRASAKRITAVIPYFG 90

This family is frequently found N-terminal to the Pribosyltran, pfam00156. Length = 117

>gnl|CDD|179535 PRK03092, PRK03092, ribose-phosphate pyrophosphokinase; Provisional

 Score = 38.4 bits (90), Expect = 0.002
 Identities = 25/82 (30%), Positives = 41/82 (50%), Gaps = 5/82 (6%)

Query: 28  LARKVAAQSDLITLQSINWRNFADGWPNLYINSAHDIRGQHVAFLASFSSP--GVIFEQI 85
           LA +VA +   + +      +FA+G   +Y+     +RG     L S ++P    + EQ+
Sbjct: 1   LAEEVAKELG-VEVTPTTAYDFANG--EIYVRFEESVRGCDAFVLQSHTAPINKWLMEQL 57

Query: 86  SVIYALPRLFVASFTLVLPFFP 107
            +I AL R      T+VLPF+P
Sbjct: 58  IMIDALKRASAKRITVVLPFYP 79

Length = 304

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	218
COG0462	314	PrsA Phosphoribosylpyrophosphate synthetase [Nucle	100.0
PRK00553	332	ribose-phosphate pyrophosphokinase; Provisional	100.0
PRK02812	330	ribose-phosphate pyrophosphokinase; Provisional	100.0
PLN02297	326	ribose-phosphate pyrophosphokinase	100.0
PRK02458	323	ribose-phosphate pyrophosphokinase; Provisional	100.0
PRK04923	319	ribose-phosphate pyrophosphokinase; Provisional	100.0
PRK02269	320	ribose-phosphate pyrophosphokinase; Provisional	100.0
PTZ00145	439	phosphoribosylpyrophosphate synthetase; Provisiona	100.0
PRK07199	301	phosphoribosylpyrophosphate synthetase; Provisiona	100.0
PRK01259	309	ribose-phosphate pyrophosphokinase; Provisional	100.0
PRK03092	304	ribose-phosphate pyrophosphokinase; Provisional	100.0
PRK00934	285	ribose-phosphate pyrophosphokinase; Provisional	100.0
TIGR01251	308	ribP_PPkin ribose-phosphate pyrophosphokinase. In	100.0
PRK06827	382	phosphoribosylpyrophosphate synthetase; Provisiona	100.0
KOG1448	316	consensus Ribose-phosphate pyrophosphokinase [Nucl	100.0
PLN02369	302	ribose-phosphate pyrophosphokinase	100.0
KOG1503	354	consensus Phosphoribosylpyrophosphate synthetase-a	100.0
PF13793	116	Pribosyltran_N: N-terminal domain of ribose phosph	100.0
TIGR01251	308	ribP_PPkin ribose-phosphate pyrophosphokinase. In	98.84
PRK07199	301	phosphoribosylpyrophosphate synthetase; Provisiona	97.58
PRK03092	304	ribose-phosphate pyrophosphokinase; Provisional	97.55
PRK00934	285	ribose-phosphate pyrophosphokinase; Provisional	97.51
PRK04923	319	ribose-phosphate pyrophosphokinase; Provisional	97.47
PRK02269	320	ribose-phosphate pyrophosphokinase; Provisional	97.29
PRK13811	170	orotate phosphoribosyltransferase; Provisional	97.29
PRK02458	323	ribose-phosphate pyrophosphokinase; Provisional	97.27
PLN02369	302	ribose-phosphate pyrophosphokinase	97.15
COG0462	314	PrsA Phosphoribosylpyrophosphate synthetase [Nucle	97.05
PRK01259	309	ribose-phosphate pyrophosphokinase; Provisional	97.05
PTZ00145	439	phosphoribosylpyrophosphate synthetase; Provisiona	96.88
PRK00553	332	ribose-phosphate pyrophosphokinase; Provisional	96.8
PRK02812	330	ribose-phosphate pyrophosphokinase; Provisional	96.76
PRK06827	382	phosphoribosylpyrophosphate synthetase; Provisiona	96.7
PRK15423	178	hypoxanthine phosphoribosyltransferase; Provisiona	95.57
PRK09162	181	hypoxanthine-guanine phosphoribosyltransferase; Pr	95.27
PLN02501	794	digalactosyldiacylglycerol synthase	94.48
TIGR01203	166	HGPRTase hypoxanthine phosphoribosyltransferase. S	94.31
PLN02238	189	hypoxanthine phosphoribosyltransferase	94.28
PLN02297	326	ribose-phosphate pyrophosphokinase	94.27
COG0634	178	Hpt Hypoxanthine-guanine phosphoribosyltransferase	93.22
PF14572	184	Pribosyl_synth: Phosphoribosyl synthetase-associat	92.02
PTZ00149	241	hypoxanthine phosphoribosyltransferase; Provisiona	91.87
PRK00129	209	upp uracil phosphoribosyltransferase; Reviewed	91.83
PLN02440	479	amidophosphoribosyltransferase	91.33
TIGR01091	207	upp uracil phosphoribosyltransferase. that include	89.38
PRK08525	445	amidophosphoribosyltransferase; Provisional	89.25
PTZ00271	211	hypoxanthine-guanine phosphoribosyltransferase; Pr	89.22
PRK05205	176	bifunctional pyrimidine regulatory protein PyrR ur	88.95
TIGR01367	187	pyrE_Therm orotate phosphoribosyltransferase, Ther	88.77
TIGR01090	169	apt adenine phosphoribosyltransferase. A phylogene	88.67
PRK00455	202	pyrE orotate phosphoribosyltransferase; Validated	87.95
PRK07272	484	amidophosphoribosyltransferase; Provisional	87.69
PRK02304	175	adenine phosphoribosyltransferase; Provisional	87.19
PRK13811	170	orotate phosphoribosyltransferase; Provisional	86.51
PRK09123	479	amidophosphoribosyltransferase; Provisional	86.15
PF00156	125	Pribosyltran: Phosphoribosyl transferase domain; I	85.51
TIGR01203	166	HGPRTase hypoxanthine phosphoribosyltransferase. S	85.04
PRK08341	442	amidophosphoribosyltransferase; Provisional	84.55
PRK05793	469	amidophosphoribosyltransferase; Provisional	84.47
PRK09162	181	hypoxanthine-guanine phosphoribosyltransferase; Pr	84.36
PRK02277	200	orotate phosphoribosyltransferase-like protein; Pr	83.71
PLN02293	187	adenine phosphoribosyltransferase	83.7
PRK13812	176	orotate phosphoribosyltransferase; Provisional	82.56
PF01012	164	ETF: Electron transfer flavoprotein domain; InterP	81.93
TIGR00336	173	pyrE orotate phosphoribosyltransferase. The conser	81.92
TIGR01134	442	purF amidophosphoribosyltransferase. Alternate nam	80.53
COG2236	192	Predicted phosphoribosyltransferases [General func	80.13

>COG0462 PrsA Phosphoribosylpyrophosphate synthetase [Nucleotide transport and metabolism / Amino acid transport and metabolism]

Probab=100.00  E-value=1.1e-59  Score=420.98  Aligned_cols=187  Identities=24%  Similarity=0.336  Sum_probs=179.8

Q ss_pred             CCcEEEEecCCcHHHHHHHHHHcCCCceeeeeEeecCCCCCeeEEEecCCCCCCeEEEEEecCCc--hhHHHHHHHHHhc
Q 027833           14 KKQVHLFYCVECEELARKVAAQSDLITLQSINWRNFADGWPNLYINSAHDIRGQHVAFLASFSSP--GVIFEQISVIYAL   91 (218)
Q Consensus        14 ~~~~~i~~g~~~~~La~~Ia~~l~~~~~~~~~~~~FpDG~~E~~v~i~~~vrG~dV~Iiqs~~~p--d~lmELlll~~al   91 (218)
                      .++++||+|+++++||++||+.| +++++++++++||||  |+||++.|++||+||||+||+++|  |++||||+|+|||
T Consensus         2 ~~~~~if~g~s~~~La~~ia~~l-~~~l~~~~~~rF~DG--E~~V~i~EsVrg~dVfI~qs~~~pvnd~lmELLi~idA~   78 (314)
T COG0462           2 MNNMKIFSGSSNPELAEKIAKRL-GIPLGKVEVKRFPDG--EIYVRIEESVRGKDVFIIQSTSPPVNDNLMELLIMIDAL   78 (314)
T ss_pred             CCceEEEECCCCHHHHHHHHHHh-CCCcccceeEEcCCC--cEEEEecccccCCeEEEEeCCCCCcCHHHHHHHHHHHHH
Confidence            46899999999999999999999 999999999999999  999999999999999999999997  8999999999999


Q ss_pred             ccCCCCeEEEEeecCCCccccccCCCCCcchHHHHHHHHhcCCCCCCCCCEEEEEeCCchhhhccccccccccccccHHH
Q 027833           92 PRLFVASFTLVLPFFPTGSFERMEEEGDVATAFTMARILSNIPTSRGGPTSLVIYDIHALQERFYFSDHVLPLFETGIPL  171 (218)
Q Consensus        92 r~~ga~~ItlViPYl~YsRQDR~~~~Ge~vsak~va~lL~~~~~~~~G~d~vitvDlHs~~~~~~F~~~~~~l~~~~~~~  171 (218)
                      |++||+|||+|+||||||||||++++|||+|+|++|+||+     .+|+|+|+|+|+|++|+|+||++|++|+  ++.|.
T Consensus        79 k~asA~~It~ViPY~gYARQDk~~~~repIsaklvA~lL~-----~aG~drv~TvDlH~~qiqgfFdipvdnl--~a~p~  151 (314)
T COG0462          79 KRASAKRITAVIPYFGYARQDKAFKPREPISAKLVANLLE-----TAGADRVLTVDLHAPQIQGFFDIPVDNL--YAAPL  151 (314)
T ss_pred             HhcCCceEEEEeecchhhccCcccCCCCCEeHHHHHHHHH-----HcCCCeEEEEcCCchhhcccCCCccccc--cchHH
Confidence            9999999999999999999999999999999999999999     9999999999999999999999999999  99999


Q ss_pred             HHHHHhhCCCCCCEEEEeCCcccHHHHHHHHHHcCcccc
Q 027833          172 LKQRLHQLPDANNLLHFRMMEPGSDSTRCWIISLRWCVP  210 (218)
Q Consensus       172 l~~~l~~~~~~~~~vvvsPD~Ga~~ra~~~a~~l~~~~~  210 (218)
                      +++|++...+.+|++|||||.||++||+.+|+.||+.+.
T Consensus       152 l~~~~~~~~~~~d~vVVSPD~Ggv~RAr~~A~~L~~~~a  190 (314)
T COG0462         152 LAEYIREKYDLDDPVVVSPDKGGVKRARALADRLGAPLA  190 (314)
T ss_pred             HHHHHHHhcCCCCcEEECCCccHHHHHHHHHHHhCCCEE
Confidence            999998754566799999999999999999999998754

>PRK00553 ribose-phosphate pyrophosphokinase; Provisional

Probab=100.00  E-value=1.1e-54  Score=394.26  Aligned_cols=187  Identities=24%  Similarity=0.299  Sum_probs=178.7

Q ss_pred             hcCCCcEEEEecCCcHHHHHHHHHHcCCCceeeeeEeecCCCCCeeEEEecCCCCCCeEEEEEecCCc--hhHHHHHHHH
Q 027833           11 KSQKKQVHLFYCVECEELARKVAAQSDLITLQSINWRNFADGWPNLYINSAHDIRGQHVAFLASFSSP--GVIFEQISVI   88 (218)
Q Consensus        11 ~~~~~~~~i~~g~~~~~La~~Ia~~l~~~~~~~~~~~~FpDG~~E~~v~i~~~vrG~dV~Iiqs~~~p--d~lmELlll~   88 (218)
                      +..+++++||+|+++++||++||+.| |++++++++++||||  |+|+++.+++||+||+|+||+++|  |++||||+++
T Consensus         4 ~~~~~~~~i~~~~~~~~La~~ia~~l-g~~l~~~~~~~FpdG--E~~v~i~~~vrg~dV~ivqs~~~p~nd~l~eLll~~   80 (332)
T PRK00553          4 SIDKSNHVIFSLSKAKKLVDSICRKL-SMKPGEIVIQKFADG--ETYIRFDESVRNKDVVIFQSTCSPVNDSLMELLIAI   80 (332)
T ss_pred             ccCCCCeEEEECCCCHHHHHHHHHHh-CCceeeeEEEECCCC--CEEEEECCCCCCCEEEEEcCCCCCCchHHHHHHHHH
Confidence            35678999999999999999999999 899999999999999  999999999999999999999875  8999999999


Q ss_pred             HhcccCCCCeEEEEeecCCCccccccCCCCCcchHHHHHHHHhcCCCCCCCCCEEEEEeCCchhhhcccccccccccccc
Q 027833           89 YALPRLFVASFTLVLPFFPTGSFERMEEEGDVATAFTMARILSNIPTSRGGPTSLVIYDIHALQERFYFSDHVLPLFETG  168 (218)
Q Consensus        89 ~alr~~ga~~ItlViPYl~YsRQDR~~~~Ge~vsak~va~lL~~~~~~~~G~d~vitvDlHs~~~~~~F~~~~~~l~~~~  168 (218)
                      +|||++||+|||+|+||||||||||++.+|||+|+|++|+||+     ++|+|+|||+|+|++++++||++|++|+  ++
T Consensus        81 ~alr~~~a~~i~~ViPYl~YaRQDr~~~~~e~isak~vA~ll~-----~~g~d~vit~DlH~~~i~~~F~ipv~~l--~a  153 (332)
T PRK00553         81 DALKRGSAKSITAILPYYGYARQDRKTAGREPITSKLVADLLT-----KAGVTRVTLTDIHSDQTQGFFDIPVDIL--RT  153 (332)
T ss_pred             HHHHHcCCCeEEEEeeccccchhhcccCCCCCccHHHHHHHHH-----hcCCCEEEEEeCChHHHHhhcCCCccee--ec
Confidence            9999999999999999999999999999999999999999999     8999999999999999999999999999  99


Q ss_pred             HHHHHHHHhhCCCCCCEEEEeCCcccHHHHHHHHHHcCc
Q 027833          169 IPLLKQRLHQLPDANNLLHFRMMEPGSDSTRCWIISLRW  207 (218)
Q Consensus       169 ~~~l~~~l~~~~~~~~~vvvsPD~Ga~~ra~~~a~~l~~  207 (218)
                      .|++++|+.+..+.++++||+||.||++||+.+|+.||+
T Consensus       154 ~~~~~~~~~~~~~~~~~vvVsPD~gg~~rA~~lA~~lg~  192 (332)
T PRK00553        154 YHVFLSRVLELLGKKDLVVVSPDYGGVKRARLIAESLEL  192 (332)
T ss_pred             hHHHHHHHHHhcCCCCeEEEEECCCcHHHHHHHHHHhCC
Confidence            999999996533568899999999999999999999984

>PRK02812 ribose-phosphate pyrophosphokinase; Provisional

Probab=100.00  E-value=5.4e-54  Score=389.33  Aligned_cols=185  Identities=23%  Similarity=0.336  Sum_probs=177.1

Q ss_pred             cCCCcEEEEecCCcHHHHHHHHHHcCCCceeeeeEeecCCCCCeeEEEecCCCCCCeEEEEEecCCc--hhHHHHHHHHH
Q 027833           12 SQKKQVHLFYCVECEELARKVAAQSDLITLQSINWRNFADGWPNLYINSAHDIRGQHVAFLASFSSP--GVIFEQISVIY   89 (218)
Q Consensus        12 ~~~~~~~i~~g~~~~~La~~Ia~~l~~~~~~~~~~~~FpDG~~E~~v~i~~~vrG~dV~Iiqs~~~p--d~lmELlll~~   89 (218)
                      +..++|+||+|+++++||++||+.| |++++++++++||||  |+|+++.++++|++|+|+||+++|  |++||||++++
T Consensus        17 ~~~~~~~i~~g~~~~~la~~ia~~l-g~~l~~~~~~~FpDG--E~~v~i~~~vrg~~V~ivqs~~~p~nd~l~eLll~~~   93 (330)
T PRK02812         17 SDNNRLRLFSGSSNPALAQEVARYL-GMDLGPMIRKRFADG--ELYVQIQESIRGCDVYLIQPTCAPVNDHLMELLIMVD   93 (330)
T ss_pred             cCCCCEEEEECCCCHHHHHHHHHHh-CCCceeeEEEECCCC--CEEEEeCCCCCCCEEEEECCCCCCccHHHHHHHHHHH
Confidence            4557899999999999999999999 899999999999999  999999999999999999999766  89999999999


Q ss_pred             hcccCCCCeEEEEeecCCCccccccCCCCCcchHHHHHHHHhcCCCCCCCCCEEEEEeCCchhhhccccccccccccccH
Q 027833           90 ALPRLFVASFTLVLPFFPTGSFERMEEEGDVATAFTMARILSNIPTSRGGPTSLVIYDIHALQERFYFSDHVLPLFETGI  169 (218)
Q Consensus        90 alr~~ga~~ItlViPYl~YsRQDR~~~~Ge~vsak~va~lL~~~~~~~~G~d~vitvDlHs~~~~~~F~~~~~~l~~~~~  169 (218)
                      |||++||+|||+|+||||||||||++++|||+|+|++|+||+     ++|+|+|||+|+|++++++||++|++|+  ++.
T Consensus        94 alr~~ga~ri~~ViPYl~YaRQDr~~~~~e~isak~vA~lL~-----~~g~d~vitvDlH~~~~~~fF~ipv~nl--~~~  166 (330)
T PRK02812         94 ACRRASARQITAVIPYYGYARADRKTAGRESITAKLVANLIT-----KAGADRVLAMDLHSAQIQGYFDIPCDHV--YGS  166 (330)
T ss_pred             HHHHhCCceEEEEEecccccccccccCCCCCchHHHHHHHHH-----hcCCCEEEEEECCchHHcCccCCCceee--eCh
Confidence            999999999999999999999999999999999999999999     8999999999999999999999999999  999


Q ss_pred             HHHHHHHhhCCCCCCEEEEeCCcccHHHHHHHHHHcCc
Q 027833          170 PLLKQRLHQLPDANNLLHFRMMEPGSDSTRCWIISLRW  207 (218)
Q Consensus       170 ~~l~~~l~~~~~~~~~vvvsPD~Ga~~ra~~~a~~l~~  207 (218)
                      |.+++|+.+. +.+|++||+||.|+.+||+.+|+.|+.
T Consensus       167 ~~l~~~i~~~-~~~~~vvVsPD~gg~~ra~~~A~~L~~  203 (330)
T PRK02812        167 PVLLDYLASK-NLEDIVVVSPDVGGVARARAFAKKLND  203 (330)
T ss_pred             HHHHHHHHhc-CCCCeEEEEECCccHHHHHHHHHHhCC
Confidence            9999999764 468999999999999999999999953

>PLN02297 ribose-phosphate pyrophosphokinase

Probab=100.00  E-value=6.9e-54  Score=387.66  Aligned_cols=192  Identities=73%  Similarity=1.138  Sum_probs=173.8

Q ss_pred             hcCCCcEEEEecCCcHHHHHHHHHHcCCCceeeeeEeecCCCCCeeEEEecCCCCCCeEEEEEecCCchhHHHHHHHHHh
Q 027833           11 KSQKKQVHLFYCVECEELARKVAAQSDLITLQSINWRNFADGWPNLYINSAHDIRGQHVAFLASFSSPGVIFEQISVIYA   90 (218)
Q Consensus        11 ~~~~~~~~i~~g~~~~~La~~Ia~~l~~~~~~~~~~~~FpDG~~E~~v~i~~~vrG~dV~Iiqs~~~pd~lmELlll~~a   90 (218)
                      |.+.++|+||+|+++++||++||+.+.|++++.+++++|||||.|+++++.++++|++|+|+||+++||++||||++++|
T Consensus        11 ~~~~~~~~i~~g~~~~~LA~~ia~~l~g~~l~~~~~~~FpDGE~~v~v~~~~~vrg~~V~ivqs~~~pd~lmELLl~~dA   90 (326)
T PLN02297         11 KKNKKQVHLFYCEETEELARKIAAESDAIELGSINWRKFPDGFPNLFINNAHGIRGQHVAFLASFSSPAVIFEQLSVIYA   90 (326)
T ss_pred             cccCCCeEEEECCCCHHHHHHHHHHhCCCceeeeEEEECCCCCEEEEEcCCCCcCCCeEEEECCCCCChHHHHHHHHHHH
Confidence            35667899999999999999999984269999999999999955566666799999999999999989999999999999


Q ss_pred             cccCCCCeEEEEeecCCCccccccCCCCCcchHHHHHHHHhcCCCCCCCCCEEEEEeCCchhhhccccccccccccccHH
Q 027833           91 LPRLFVASFTLVLPFFPTGSFERMEEEGDVATAFTMARILSNIPTSRGGPTSLVIYDIHALQERFYFSDHVLPLFETGIP  170 (218)
Q Consensus        91 lr~~ga~~ItlViPYl~YsRQDR~~~~Ge~vsak~va~lL~~~~~~~~G~d~vitvDlHs~~~~~~F~~~~~~l~~~~~~  170 (218)
                      ||++||+|||+|+||||||||||++++|||+|+|++|+||++++.+.+|+|+|+|+|+|++++++||+.|+.++++++.|
T Consensus        91 lr~~ga~~i~~ViPY~~YaRQDr~~~~ge~isak~vA~ll~~~~~~~~g~d~vitvDlH~~~~~~fF~~~~~~l~l~a~~  170 (326)
T PLN02297         91 LPKLFVASFTLVLPFFPTGTSERVEREGDVATAFTLARILSNIPISRGGPTSLVIFDIHALQERFYFGDNVLPCFESGIP  170 (326)
T ss_pred             HHHcCCCEEEEEeeCChhhcCCCCCCCCCCchHHHHHHHHhcccccccCCCEEEEEeCCChHHCCccCCcccchhhccHH
Confidence            99999999999999999999999999999999999999999444332799999999999999999999999877668999


Q ss_pred             HHHHHHhhCCCCCCEEEEeCCcccHHHHHHHH
Q 027833          171 LLKQRLHQLPDANNLLHFRMMEPGSDSTRCWI  202 (218)
Q Consensus       171 ~l~~~l~~~~~~~~~vvvsPD~Ga~~ra~~~a  202 (218)
                      .+++|+++..+.+|++|||||.||.+|++.++
T Consensus       171 ~l~~~i~~~~~~~~~vvVsPD~Ga~~ra~~~a  202 (326)
T PLN02297        171 LLKKRLQQLPDSDNIVIAFPDDGAWKRFHKQF  202 (326)
T ss_pred             HHHHHHHhccccCCcEEEecCccHHHHHHHHc
Confidence            99999976423578999999999999998877

>PRK02458 ribose-phosphate pyrophosphokinase; Provisional

Probab=100.00  E-value=7.4e-54  Score=387.50  Aligned_cols=186  Identities=25%  Similarity=0.365  Sum_probs=177.8

Q ss_pred             cCCCcEEEEecCCcHHHHHHHHHHcCCCceeeeeEeecCCCCCeeEEEecCCCCCCeEEEEEecCCc--hhHHHHHHHHH
Q 027833           12 SQKKQVHLFYCVECEELARKVAAQSDLITLQSINWRNFADGWPNLYINSAHDIRGQHVAFLASFSSP--GVIFEQISVIY   89 (218)
Q Consensus        12 ~~~~~~~i~~g~~~~~La~~Ia~~l~~~~~~~~~~~~FpDG~~E~~v~i~~~vrG~dV~Iiqs~~~p--d~lmELlll~~   89 (218)
                      .++++++||+|+++++||++||+.| |++++++++++||||  |.|+++.++++|++|+|+||++.|  |++||||++++
T Consensus         5 ~~~~~~~i~~~~~~~~la~~ia~~l-g~~l~~~~~~~FpdG--E~~v~i~~~v~g~dV~ii~s~~~~~nd~l~eLll~~~   81 (323)
T PRK02458          5 YADKQIKLFSLNSNLEIAEKIAQAA-GVPLGKLSSRQFSDG--EIMINIEESVRGDDIYIIQSTSFPVNDHLWELLIMID   81 (323)
T ss_pred             cCCCCeEEEECCCCHHHHHHHHHHh-CCceeeeEEEECCCC--CEEEEecCCcCCCeEEEEecCCCCCchHHHHHHHHHH
Confidence            4568899999999999999999999 899999999999999  999999999999999999999765  89999999999


Q ss_pred             hcccCCCCeEEEEeecCCCccccccCCCCCcchHHHHHHHHhcCCCCCCCCCEEEEEeCCchhhhccccccccccccccH
Q 027833           90 ALPRLFVASFTLVLPFFPTGSFERMEEEGDVATAFTMARILSNIPTSRGGPTSLVIYDIHALQERFYFSDHVLPLFETGI  169 (218)
Q Consensus        90 alr~~ga~~ItlViPYl~YsRQDR~~~~Ge~vsak~va~lL~~~~~~~~G~d~vitvDlHs~~~~~~F~~~~~~l~~~~~  169 (218)
                      |||++||++|++|+||||||||||++++|||+|+|++|+||+     ++|+|+|+|+|+|++++++||++|++|+  ++.
T Consensus        82 alr~~~a~~i~lViPYl~YaRQDr~~~~ge~isak~~a~lL~-----~~g~d~vitvD~H~~~i~~~F~~p~~nl--~~~  154 (323)
T PRK02458         82 ACKRASANTVNVVLPYFGYARQDRIAKPREPITAKLVANMLV-----KAGVDRVLTLDLHAVQVQGFFDIPVDNL--FTV  154 (323)
T ss_pred             HHHHcCCceEEEEEeccccchhhcccCCCCCchHHHHHHHHh-----hcCCCeEEEEecCcHHhhccccCCceEE--EEH
Confidence            999999999999999999999999999999999999999999     8999999999999999999999999999  999


Q ss_pred             HHHHHHHhhC-CCCCCEEEEeCCcccHHHHHHHHHHcCc
Q 027833          170 PLLKQRLHQL-PDANNLLHFRMMEPGSDSTRCWIISLRW  207 (218)
Q Consensus       170 ~~l~~~l~~~-~~~~~~vvvsPD~Ga~~ra~~~a~~l~~  207 (218)
                      |++++|+.+. ++.++++||+||.||.+||+.+|+.|++
T Consensus       155 p~~~~~l~~~~~~~~~~vvV~pd~Ga~~~A~~la~~L~~  193 (323)
T PRK02458        155 PLFAKHYCKKGLSGSDVVVVSPKNSGIKRARSLAEYLDA  193 (323)
T ss_pred             HHHHHHHHHhCCCCCceEEEEECCChHHHHHHHHHHhCC
Confidence            9999999764 2448899999999999999999999985

>PRK04923 ribose-phosphate pyrophosphokinase; Provisional

Probab=100.00  E-value=6.7e-54  Score=387.19  Aligned_cols=183  Identities=22%  Similarity=0.269  Sum_probs=174.2

Q ss_pred             CCcEEEEecCCcHHHHHHHHHHcCCCceeeeeEeecCCCCCeeEEEecCCCCCCeEEEEEecCCc--hhHHHHHHHHHhc
Q 027833           14 KKQVHLFYCVECEELARKVAAQSDLITLQSINWRNFADGWPNLYINSAHDIRGQHVAFLASFSSP--GVIFEQISVIYAL   91 (218)
Q Consensus        14 ~~~~~i~~g~~~~~La~~Ia~~l~~~~~~~~~~~~FpDG~~E~~v~i~~~vrG~dV~Iiqs~~~p--d~lmELlll~~al   91 (218)
                      .++|+||+|+++++||++||+.| |++++++++++||||  |+|++++++++|++|+|+||+++|  |++||||++++|+
T Consensus         4 ~~~~~i~~g~~~~~La~~ia~~l-g~~l~~~~~~~FpdG--E~~v~i~~~v~g~~V~iiqs~~~p~nd~lmeLl~~~~al   80 (319)
T PRK04923          4 QRNLLVFSGNANKPLAQSICKEL-GVRMGKALVTRFSDG--EVQVEIEESVRRQEVFVIQPTCAPSAENLMELLVLIDAL   80 (319)
T ss_pred             CCceEEEECCCCHHHHHHHHHHh-CCceeeeEEEECCCC--CEEEEECCCcCCCeEEEEecCCCCCchHHHHHHHHHHHH
Confidence            46799999999999999999999 999999999999999  999999999999999999999765  8999999999999


Q ss_pred             ccCCCCeEEEEeecCCCccccccCCC-CCcchHHHHHHHHhcCCCCCCCCCEEEEEeCCchhhhccccccccccccccHH
Q 027833           92 PRLFVASFTLVLPFFPTGSFERMEEE-GDVATAFTMARILSNIPTSRGGPTSLVIYDIHALQERFYFSDHVLPLFETGIP  170 (218)
Q Consensus        92 r~~ga~~ItlViPYl~YsRQDR~~~~-Ge~vsak~va~lL~~~~~~~~G~d~vitvDlHs~~~~~~F~~~~~~l~~~~~~  170 (218)
                      |++||+|||+|+||||||||||++.+ |||+|+|++|+||+     ++|+|+|||+|+|++++++||++|++|+  ++.|
T Consensus        81 r~~~a~~i~~ViPYl~YaRQDr~~~~~~~~isak~va~ll~-----~~g~d~vitvD~H~~~~~~~f~~p~~~l--~~~~  153 (319)
T PRK04923         81 KRASAASVTAVIPYFGYSRQDRRMRSSRVPITAKVAAKMIS-----AMGADRVLTVDLHADQIQGFFDVPVDNV--YASP  153 (319)
T ss_pred             HHcCCcEEEEEeeccccccccccccCCCCCccHHHHHHHHH-----hcCCCEEEEEeCChHHHHhhcCCCceee--eChH
Confidence            99999999999999999999999965 67999999999999     8999999999999999999999999999  9999


Q ss_pred             HHHHHHhhCCCCCCEEEEeCCcccHHHHHHHHHHcC
Q 027833          171 LLKQRLHQLPDANNLLHFRMMEPGSDSTRCWIISLR  206 (218)
Q Consensus       171 ~l~~~l~~~~~~~~~vvvsPD~Ga~~ra~~~a~~l~  206 (218)
                      .+++|+.+..+.+|++|||||.|+.+||+.+|+.|+
T Consensus       154 ~l~~~i~~~~~~~~~vVVsPD~Ga~~rA~~lA~~L~  189 (319)
T PRK04923        154 LLLADIWRAYGTDNLIVVSPDVGGVVRARAVAKRLD  189 (319)
T ss_pred             HHHHHHHHhcCCCCCEEEEECCchHHHHHHHHHHcC
Confidence            999999653346899999999999999999999997

>PRK02269 ribose-phosphate pyrophosphokinase; Provisional

Probab=100.00  E-value=6.1e-54  Score=387.56  Aligned_cols=183  Identities=28%  Similarity=0.368  Sum_probs=175.7

Q ss_pred             CcEEEEecCCcHHHHHHHHHHcCCCceeeeeEeecCCCCCeeEEEecCCCCCCeEEEEEecCCc--hhHHHHHHHHHhcc
Q 027833           15 KQVHLFYCVECEELARKVAAQSDLITLQSINWRNFADGWPNLYINSAHDIRGQHVAFLASFSSP--GVIFEQISVIYALP   92 (218)
Q Consensus        15 ~~~~i~~g~~~~~La~~Ia~~l~~~~~~~~~~~~FpDG~~E~~v~i~~~vrG~dV~Iiqs~~~p--d~lmELlll~~alr   92 (218)
                      ++|+||+|+++++||++||+.| |++++++++++||||  |+|+++.+++||+||+|+||+.+|  |++||||++++|||
T Consensus         4 ~~~~i~~~~~~~~la~~ia~~l-g~~l~~~~~~~FpdG--E~~v~i~~~vrg~dV~iv~s~~~~~nd~lmelll~~~alr   80 (320)
T PRK02269          4 SDLKLFALSSNKELAEKVAQEI-GIELGKSSVRQFSDG--EIQVNIEESIRGHHVFILQSTSSPVNDNLMEILIMVDALK   80 (320)
T ss_pred             CCeEEEECCCCHHHHHHHHHHh-CCceeeeEEEECCCC--CEEEEECCCCCCCEEEEEecCCCCccchHHHHHHHHHHHH
Confidence            4799999999999999999999 899999999999999  999999999999999999999875  89999999999999


Q ss_pred             cCCCCeEEEEeecCCCccccccCCCCCcchHHHHHHHHhcCCCCCCCCCEEEEEeCCchhhhccccccccccccccHHHH
Q 027833           93 RLFVASFTLVLPFFPTGSFERMEEEGDVATAFTMARILSNIPTSRGGPTSLVIYDIHALQERFYFSDHVLPLFETGIPLL  172 (218)
Q Consensus        93 ~~ga~~ItlViPYl~YsRQDR~~~~Ge~vsak~va~lL~~~~~~~~G~d~vitvDlHs~~~~~~F~~~~~~l~~~~~~~l  172 (218)
                      ++||+|||+|+||||||||||++++|||+|+|++|+||+     ++|+|+|+|+|+|++++++||++|++|+  ++.|++
T Consensus        81 ~~~a~~i~~V~PYl~YaRQDr~~~~~e~isak~~a~ll~-----~~g~d~vit~D~H~~~~~~~f~~p~~~l--~~~p~l  153 (320)
T PRK02269         81 RASAESINVVMPYYGYARQDRKARSREPITSKLVANMLE-----VAGVDRLLTVDLHAAQIQGFFDIPVDHL--MGAPLI  153 (320)
T ss_pred             HhCCCeEEEEEeccccchhhcccCCCCCchHHHHHHHHh-----hcCCCEEEEECCChHHHhccccCCchhh--hhHHHH
Confidence            999999999999999999999999999999999999999     8999999999999999999999999999  999999


Q ss_pred             HHHHhhC-CCCCCEEEEeCCcccHHHHHHHHHHcCc
Q 027833          173 KQRLHQL-PDANNLLHFRMMEPGSDSTRCWIISLRW  207 (218)
Q Consensus       173 ~~~l~~~-~~~~~~vvvsPD~Ga~~ra~~~a~~l~~  207 (218)
                      ++|+.+. ++.++++|||||.||++||+.+|+.||+
T Consensus       154 ~~~i~~~~~~~~~~vvVsPd~G~~~~A~~lA~~lg~  189 (320)
T PRK02269        154 ADYFDRRGLVGDDVVVVSPDHGGVTRARKLAQFLKT  189 (320)
T ss_pred             HHHHHHhCCCCCCcEEEEECccHHHHHHHHHHHhCC
Confidence            9999764 2457899999999999999999999985

>PTZ00145 phosphoribosylpyrophosphate synthetase; Provisional

Probab=100.00  E-value=1.5e-53  Score=396.80  Aligned_cols=182  Identities=20%  Similarity=0.224  Sum_probs=175.2

Q ss_pred             CcEEEEecCCcHHHHHHHHHHcCCCceeeeeEeecCCCCCeeEEEecCCCCCCeEEEEEecCCc--hhHHHHHHHHHhcc
Q 027833           15 KQVHLFYCVECEELARKVAAQSDLITLQSINWRNFADGWPNLYINSAHDIRGQHVAFLASFSSP--GVIFEQISVIYALP   92 (218)
Q Consensus        15 ~~~~i~~g~~~~~La~~Ia~~l~~~~~~~~~~~~FpDG~~E~~v~i~~~vrG~dV~Iiqs~~~p--d~lmELlll~~alr   92 (218)
                      ++|+||+|+++++||++||+.| |++++.+++++||||  |+|+++.++|||+||+|+||+++|  |++||||++++|||
T Consensus       118 ~~m~I~sgs~~~~LA~~IA~~L-g~~l~~~~~~rFpDG--E~~Vri~e~VrG~dV~IVqS~~~pvNd~LmELLllidAlr  194 (439)
T PTZ00145        118 ENAILFSGSSNPLLSKNIADHL-GTILGRVHLKRFADG--EVSMQFLESIRGKDVYIIQPTCPPVNENLIELLLMISTCR  194 (439)
T ss_pred             CCeEEEECCCCHHHHHHHHHHh-CCCceeeEEEECCCC--CEEEEECCCcCCCeEEEEecCCCCCcHHHHHHHHHHHHHH
Confidence            6799999999999999999999 899999999999999  999999999999999999999876  88999999999999


Q ss_pred             cCCCCeEEEEeecCCCccccccCCCCCcchHHHHHHHHhcCCCCCCCCCEEEEEeCCchhhhcccc--ccccccccccHH
Q 027833           93 RLFVASFTLVLPFFPTGSFERMEEEGDVATAFTMARILSNIPTSRGGPTSLVIYDIHALQERFYFS--DHVLPLFETGIP  170 (218)
Q Consensus        93 ~~ga~~ItlViPYl~YsRQDR~~~~Ge~vsak~va~lL~~~~~~~~G~d~vitvDlHs~~~~~~F~--~~~~~l~~~~~~  170 (218)
                      ++||+|||+|+||||||||||++++|||+|++++|+||+     ++|+|+|||+|+|++++++||+  +|++|+  ++.+
T Consensus       195 ~agAkrItlViPYl~YaRQDR~~~~gepIsak~vA~lL~-----~~G~d~VitvDlHs~~i~~fF~~~iPvdnl--~a~~  267 (439)
T PTZ00145        195 RASAKKITAVIPYYGYARQDRKLSSRVPISAADVARMIE-----AMGVDRVVAIDLHSGQIQGFFGPRVPVDNL--EAQL  267 (439)
T ss_pred             HhccCeEEEEeecccchheecccCCCCChhHHHHHHHHH-----HcCCCeEEEEecChHHHHhhcCCCcccccc--cccH
Confidence            999999999999999999999999999999999999999     8999999999999999999997  899999  9999


Q ss_pred             HHHHHHhhCCCCCCEEEEeCCcccHHHHHHHHHHcCc
Q 027833          171 LLKQRLHQLPDANNLLHFRMMEPGSDSTRCWIISLRW  207 (218)
Q Consensus       171 ~l~~~l~~~~~~~~~vvvsPD~Ga~~ra~~~a~~l~~  207 (218)
                      .+++|+.+. +..++|||+||.|+.+||+.+|+.|+.
T Consensus       268 ~~a~~i~~~-~l~~pVVVsPD~Ga~~RAr~~A~~L~~  303 (439)
T PTZ00145        268 IGLDYFTKK-DLYKPVIVSPDAGGVYRARKFQDGLNH  303 (439)
T ss_pred             HHHHHHhhc-CCCccEEEccCcchHHHHHHHHHHhcc
Confidence            999999763 468899999999999999999999973

>PRK07199 phosphoribosylpyrophosphate synthetase; Provisional

Probab=100.00  E-value=9.5e-53  Score=377.02  Aligned_cols=181  Identities=18%  Similarity=0.158  Sum_probs=172.1

Q ss_pred             cEEEEecCCcHHHHHHHHHHcCCCceeeeeEeecCCCCCeeEEEecCCCCCCeEEEEEecCCc-hhHHHHHHHHHhcccC
Q 027833           16 QVHLFYCVECEELARKVAAQSDLITLQSINWRNFADGWPNLYINSAHDIRGQHVAFLASFSSP-GVIFEQISVIYALPRL   94 (218)
Q Consensus        16 ~~~i~~g~~~~~La~~Ia~~l~~~~~~~~~~~~FpDG~~E~~v~i~~~vrG~dV~Iiqs~~~p-d~lmELlll~~alr~~   94 (218)
                      +++||+|+++++||++||+.| |++++++++++||||  |.|+++.++++|+||+|+||+.+| |++||||++++|||++
T Consensus         2 ~~~i~~~~~~~~la~~ia~~l-g~~~~~~~~~~F~dG--E~~v~i~~~v~g~~V~ivqs~~~~n~~l~elll~~~alr~~   78 (301)
T PRK07199          2 QPLLLALPGNEAAAGRLAAAL-GVEVGRIELHRFPDG--ESYVRLDSPVAGRTVVLVCSLDRPDEKLLPLLFAAEAAREL   78 (301)
T ss_pred             ceEEEECCCCHHHHHHHHHHh-CCceeeeEEEECCCC--CEEEEECCCCCCCEEEEECCCCCCcHHHHHHHHHHHHHHHc
Confidence            578999999999999999999 899999999999999  999999999999999999999875 8899999999999999


Q ss_pred             CCCeEEEEeecCCCccccccCCCCCcchHHHHHHHHhcCCCCCCCCCEEEEEeCCc---hhhhccccccccccccccHHH
Q 027833           95 FVASFTLVLPFFPTGSFERMEEEGDVATAFTMARILSNIPTSRGGPTSLVIYDIHA---LQERFYFSDHVLPLFETGIPL  171 (218)
Q Consensus        95 ga~~ItlViPYl~YsRQDR~~~~Ge~vsak~va~lL~~~~~~~~G~d~vitvDlHs---~~~~~~F~~~~~~l~~~~~~~  171 (218)
                      ||++||+|+||||||||||++++|||+|+|++|+||+     + |+|+|+|+|+|+   .++++||++|++|+  ++.+.
T Consensus        79 ~a~~i~~ViPY~~YaRqDr~~~~ge~isak~vA~ll~-----~-~~d~vit~DlH~~~~~~~~~~f~ip~~nl--~~~~~  150 (301)
T PRK07199         79 GARRVGLVAPYLAYMRQDIAFHPGEAISQRHFARLLS-----G-SFDRLVTVDPHLHRYPSLSEVYPIPAVVL--SAAPA  150 (301)
T ss_pred             CCCeEEEEeecccccccccccCCCCCccHHHHHHHHH-----h-hcCeEEEEeccchhhHHhcCcccCCcccc--chHHH
Confidence            9999999999999999999999999999999999998     4 899999999997   68899999999999  99999


Q ss_pred             HHHHHhhCCCCCCEEEEeCCcccHHHHHHHHHHcCccc
Q 027833          172 LKQRLHQLPDANNLLHFRMMEPGSDSTRCWIISLRWCV  209 (218)
Q Consensus       172 l~~~l~~~~~~~~~vvvsPD~Ga~~ra~~~a~~l~~~~  209 (218)
                      +++|+++.  .++++||+||.|+.+||+.+|+.+|.-+
T Consensus       151 la~~l~~~--~~~~vVVsPd~g~~~~a~~la~~l~~~~  186 (301)
T PRK07199        151 IAAWIRAH--VPRPLLIGPDEESEQWVAAVAERAGAPH  186 (301)
T ss_pred             HHHHHHhc--CCCcEEEEeCCChHHHHHHHHHHhCCCE
Confidence            99999763  5789999999999999999999999633

>PRK01259 ribose-phosphate pyrophosphokinase; Provisional

Probab=100.00  E-value=2e-52  Score=376.13  Aligned_cols=180  Identities=27%  Similarity=0.330  Sum_probs=173.5

Q ss_pred             EEEEecCCcHHHHHHHHHHcCCCceeeeeEeecCCCCCeeEEEecCCCCCCeEEEEEecCCc--hhHHHHHHHHHhcccC
Q 027833           17 VHLFYCVECEELARKVAAQSDLITLQSINWRNFADGWPNLYINSAHDIRGQHVAFLASFSSP--GVIFEQISVIYALPRL   94 (218)
Q Consensus        17 ~~i~~g~~~~~La~~Ia~~l~~~~~~~~~~~~FpDG~~E~~v~i~~~vrG~dV~Iiqs~~~p--d~lmELlll~~alr~~   94 (218)
                      |+||+|+++++||++||+.| |.+++++++++||||  |+|+++.++++|++|+|+||+++|  |++|||+++++|+|++
T Consensus         1 ~~i~~~~~~~~la~~ia~~l-g~~~~~~~~~~FpdG--E~~vri~~~v~g~~V~ii~s~~~~~nd~l~eLll~~~alr~~   77 (309)
T PRK01259          1 MKLFAGNANPELAEKIAKYL-GIPLGKASVGRFSDG--EISVEINENVRGKDVFIIQSTCAPTNDNLMELLIMIDALKRA   77 (309)
T ss_pred             CEEEECCCCHHHHHHHHHHh-CCceeeeEEEECCCC--CEEEEeCCCCCCCEEEEECCCCCCCcHHHHHHHHHHHHHHHc
Confidence            57999999999999999999 899999999999999  999999999999999999999655  8999999999999999


Q ss_pred             CCCeEEEEeecCCCccccccCCCCCcchHHHHHHHHhcCCCCCCCCCEEEEEeCCchhhhccccccccccccccHHHHHH
Q 027833           95 FVASFTLVLPFFPTGSFERMEEEGDVATAFTMARILSNIPTSRGGPTSLVIYDIHALQERFYFSDHVLPLFETGIPLLKQ  174 (218)
Q Consensus        95 ga~~ItlViPYl~YsRQDR~~~~Ge~vsak~va~lL~~~~~~~~G~d~vitvDlHs~~~~~~F~~~~~~l~~~~~~~l~~  174 (218)
                      ||++||+|+||||||||||++++|||+|+|++|+||+     ++|+|+|+|+|+|++++++||++|++|+  ++.|.+++
T Consensus        78 ga~~i~lViPYl~YsRQDr~~~~ge~isak~~a~lL~-----~~g~d~vitvD~H~~~~~~~f~~p~~~l--~~~~~l~~  150 (309)
T PRK01259         78 SAGRITAVIPYFGYARQDRKARSRVPITAKLVANLLE-----TAGADRVLTMDLHADQIQGFFDIPVDNL--YGSPILLE  150 (309)
T ss_pred             CCceEEEEeeccccchhhhhhccCCCchHHHHHHHHh-----hcCCCEEEEEcCChHHHcCcCCCCceee--eecHHHHH
Confidence            9999999999999999999999999999999999999     8999999999999999999999999999  99999999


Q ss_pred             HHhhCCCCCCEEEEeCCcccHHHHHHHHHHcCc
Q 027833          175 RLHQLPDANNLLHFRMMEPGSDSTRCWIISLRW  207 (218)
Q Consensus       175 ~l~~~~~~~~~vvvsPD~Ga~~ra~~~a~~l~~  207 (218)
                      |+++. +.++++||+||.||..+|+.+|..||+
T Consensus       151 ~i~~~-~~~~~vvv~pd~Gg~~~A~~la~~Lg~  182 (309)
T PRK01259        151 DIKQK-NLENLVVVSPDVGGVVRARALAKRLDA  182 (309)
T ss_pred             HHHhc-CCCCcEEEEECCCcHHHHHHHHHHhCC
Confidence            99764 468999999999999999999999985

>PRK03092 ribose-phosphate pyrophosphokinase; Provisional

Probab=100.00  E-value=5.1e-52  Score=372.75  Aligned_cols=169  Identities=24%  Similarity=0.369  Sum_probs=163.1

Q ss_pred             HHHHHHHHcCCCceeeeeEeecCCCCCeeEEEecCCCCCCeEEEEEecCCc--hhHHHHHHHHHhcccCCCCeEEEEeec
Q 027833           28 LARKVAAQSDLITLQSINWRNFADGWPNLYINSAHDIRGQHVAFLASFSSP--GVIFEQISVIYALPRLFVASFTLVLPF  105 (218)
Q Consensus        28 La~~Ia~~l~~~~~~~~~~~~FpDG~~E~~v~i~~~vrG~dV~Iiqs~~~p--d~lmELlll~~alr~~ga~~ItlViPY  105 (218)
                      ||++||+.| |++++++++++||||  |+|+++.++++|++|+|+||+++|  |++||||++++|||++||+|||+|+||
T Consensus         1 la~~ia~~l-~~~l~~~~~~~F~DG--E~~vri~~~v~g~~v~ii~s~~~p~nd~l~ell~~~~a~r~~~a~~i~~ViPY   77 (304)
T PRK03092          1 LAEEVAKEL-GVEVTPTTAYDFANG--EIYVRFEESVRGCDAFVLQSHTAPINKWLMEQLIMIDALKRASAKRITVVLPF   77 (304)
T ss_pred             CHHHHHHHh-CCceeeeEEEECCCC--CEEEEECCCCCCCEEEEEeCCCCCCcHHHHHHHHHHHHHHHcCCCeEEEEEec
Confidence            689999999 899999999999999  999999999999999999999876  899999999999999999999999999


Q ss_pred             CCCccccccCCCCCcchHHHHHHHHhcCCCCCCCCCEEEEEeCCchhhhccccccccccccccHHHHHHHHhhCCCCCCE
Q 027833          106 FPTGSFERMEEEGDVATAFTMARILSNIPTSRGGPTSLVIYDIHALQERFYFSDHVLPLFETGIPLLKQRLHQLPDANNL  185 (218)
Q Consensus       106 l~YsRQDR~~~~Ge~vsak~va~lL~~~~~~~~G~d~vitvDlHs~~~~~~F~~~~~~l~~~~~~~l~~~l~~~~~~~~~  185 (218)
                      ||||||||++++|||+|+|++|+||+     .+|+|+|+|+|+|++++++||++|++|+  ++.|.+++|+.+..+.+|+
T Consensus        78 l~YaRQDr~~~~~e~isak~va~lL~-----~~g~d~vitvD~H~~~~~~~f~~p~~~l--~~~~~la~~i~~~~~~~~~  150 (304)
T PRK03092         78 YPYARQDKKHRGREPISARLVADLFK-----TAGADRIMTVDLHTAQIQGFFDGPVDHL--FAMPLLADYVRDKYDLDNV  150 (304)
T ss_pred             ccccccccccCCCCCccHHHHHHHHH-----hcCCCeEEEEecChHHHHhhcCCCeeeE--echHHHHHHHHHhcCCCCc
Confidence            99999999999999999999999999     8999999999999999999999999999  9999999999764356899


Q ss_pred             EEEeCCcccHHHHHHHHHHcC
Q 027833          186 LHFRMMEPGSDSTRCWIISLR  206 (218)
Q Consensus       186 vvvsPD~Ga~~ra~~~a~~l~  206 (218)
                      +|||||.||.+||+.+|+.|+
T Consensus       151 vvVspd~Ga~~~a~~la~~L~  171 (304)
T PRK03092        151 TVVSPDAGRVRVAEQWADRLG  171 (304)
T ss_pred             EEEEecCchHHHHHHHHHHcC
Confidence            999999999999999999999

>PRK00934 ribose-phosphate pyrophosphokinase; Provisional

Probab=100.00  E-value=2.2e-51  Score=365.42  Aligned_cols=178  Identities=20%  Similarity=0.233  Sum_probs=169.8

Q ss_pred             EEEecCCcHHHHHHHHHHcCCCceeeeeEeecCCCCCeeEEEecCCCCCCeEEEEEecCCc-hhHHHHHHHHHhcccCCC
Q 027833           18 HLFYCVECEELARKVAAQSDLITLQSINWRNFADGWPNLYINSAHDIRGQHVAFLASFSSP-GVIFEQISVIYALPRLFV   96 (218)
Q Consensus        18 ~i~~g~~~~~La~~Ia~~l~~~~~~~~~~~~FpDG~~E~~v~i~~~vrG~dV~Iiqs~~~p-d~lmELlll~~alr~~ga   96 (218)
                      +||+|+++++||++||+.| |++++++++++||||  |.|+++.++++|++|+|+|++.++ |++||||++++|||++||
T Consensus         1 ~i~~~~~~~~la~~ia~~l-~~~~~~~~~~~FpdG--E~~v~i~~~v~g~~v~i~~~~~~~~d~l~ell~~~~alr~~ga   77 (285)
T PRK00934          1 MIIGGSASQLLASEVARLL-NTELALVETKRFPDG--ELYVRILGEIDGEDVVIISTTYPQDENLVELLLLIDALRDEGA   77 (285)
T ss_pred             CeEeCCCCHHHHHHHHHHH-CCceEeeEEEECCCC--CEEEEECCCcCCCEEEEEeCCCCCcHHHHHHHHHHHHHHHcCC
Confidence            3789999999999999999 999999999999999  999999999999999999998776 779999999999999999


Q ss_pred             CeEEEEeecCCCccccccCCCCCcchHHHHHHHHhcCCCCCCCCCEEEEEeCCchhhhccccccccccccccHHHHHHHH
Q 027833           97 ASFTLVLPFFPTGSFERMEEEGDVATAFTMARILSNIPTSRGGPTSLVIYDIHALQERFYFSDHVLPLFETGIPLLKQRL  176 (218)
Q Consensus        97 ~~ItlViPYl~YsRQDR~~~~Ge~vsak~va~lL~~~~~~~~G~d~vitvDlHs~~~~~~F~~~~~~l~~~~~~~l~~~l  176 (218)
                      +|||+|+||||||||||++++|||+|+|++|+||+     ++| |+|+|+|+|++++++||++|++|+  ++.+.+++|+
T Consensus        78 ~~i~~v~PY~~YaRqDr~~~~ge~isak~~a~ll~-----~~~-d~vitvD~H~~~~~~~f~~~~~~l--~a~~~la~~i  149 (285)
T PRK00934         78 KSITLVIPYLGYARQDKRFKPGEPISARAIAKIIS-----AYY-DRIITINIHEPSILEFFPIPFINL--DAAPLIAEYI  149 (285)
T ss_pred             CeEEEEecCCcccccccccCCCCCccHHHHHHHHH-----Hhc-CEEEEEcCChHHHcCcCCCcEeEe--ecHHHHHHHH
Confidence            99999999999999999999999999999999999     788 999999999999999999999999  9999999999


Q ss_pred             hhCCCCCCEEEEeCCcccHHHHHHHHHHcCcc
Q 027833          177 HQLPDANNLLHFRMMEPGSDSTRCWIISLRWC  208 (218)
Q Consensus       177 ~~~~~~~~~vvvsPD~Ga~~ra~~~a~~l~~~  208 (218)
                      .+  +.++++||+||.|+..+|+.+|+.||+-
T Consensus       150 ~~--~~~~~vvv~pd~Ga~~~a~~lA~~l~~~  179 (285)
T PRK00934        150 GD--KLDDPLVLAPDKGALELAKEAAEILGCE  179 (285)
T ss_pred             Hh--cCCCCEEEEeCCchHHHHHHHHHHhCCC
Confidence            65  4568899999999999999999999953

>TIGR01251 ribP_PPkin ribose-phosphate pyrophosphokinase

Probab=100.00  E-value=6.6e-51  Score=365.76  Aligned_cols=180  Identities=24%  Similarity=0.342  Sum_probs=172.7

Q ss_pred             EEEEecCCcHHHHHHHHHHcCCCceeeeeEeecCCCCCeeEEEecCCCCCCeEEEE-EecCCc--hhHHHHHHHHHhccc
Q 027833           17 VHLFYCVECEELARKVAAQSDLITLQSINWRNFADGWPNLYINSAHDIRGQHVAFL-ASFSSP--GVIFEQISVIYALPR   93 (218)
Q Consensus        17 ~~i~~g~~~~~La~~Ia~~l~~~~~~~~~~~~FpDG~~E~~v~i~~~vrG~dV~Ii-qs~~~p--d~lmELlll~~alr~   93 (218)
                      |+||+|+++++||++||+.| |++++++++++||||  |+|+++.++++|+||+|+ ||+++|  |++|||+++++|+|+
T Consensus         1 ~~i~~~~~~~~la~~ia~~l-g~~~~~~~~~~FpdG--E~~v~i~~~v~g~~v~iv~~s~~~~~~~~l~el~~~~~a~r~   77 (308)
T TIGR01251         1 MKIFSGSSNQELAQKVAKNL-GLPLGDVEVKRFPDG--ELYVRINESVRGKDVFIIQQSTSAPVNDNLMELLIMIDALKR   77 (308)
T ss_pred             CEEEECCCCHHHHHHHHHHh-CCeeeeeEEEECCCC--CEEEEECCCCCCCeEEEEeCCCCCCccHHHHHHHHHHHHHHH
Confidence            57899999999999999999 899999999999999  999999999999999999 999755  899999999999999


Q ss_pred             CCCCeEEEEeecCCCccccccCCCCCcchHHHHHHHHhcCCCCCCCCCEEEEEeCCchhhhccccccccccccccHHHHH
Q 027833           94 LFVASFTLVLPFFPTGSFERMEEEGDVATAFTMARILSNIPTSRGGPTSLVIYDIHALQERFYFSDHVLPLFETGIPLLK  173 (218)
Q Consensus        94 ~ga~~ItlViPYl~YsRQDR~~~~Ge~vsak~va~lL~~~~~~~~G~d~vitvDlHs~~~~~~F~~~~~~l~~~~~~~l~  173 (218)
                      +||+|||+|+||||||||||++++|||+|+|++|+||+     ++|+|+++|+|+|++++++||++|++|+  ++.+.++
T Consensus        78 ~ga~~i~~v~PYl~Y~RqDr~~~~ge~is~~~~a~ll~-----~~g~d~vit~DlHs~~~~~~f~ip~~~l--~a~~~l~  150 (308)
T TIGR01251        78 ASAKSITAVIPYYGYARQDKKFKSREPISAKLVANLLE-----TAGADRVLTVDLHSPQIQGFFDVPVDNL--YASPVLA  150 (308)
T ss_pred             cCCCeEEEEEEecccchhccccCCCCCchHHHHHHHHH-----HcCCCEEEEecCChHHhcCcCCCceecc--cCHHHHH
Confidence            99999999999999999999999999999999999999     8999999999999999999999999999  9999999


Q ss_pred             HHHhhCCCCCCEEEEeCCcccHHHHHHHHHHcCc
Q 027833          174 QRLHQLPDANNLLHFRMMEPGSDSTRCWIISLRW  207 (218)
Q Consensus       174 ~~l~~~~~~~~~vvvsPD~Ga~~ra~~~a~~l~~  207 (218)
                      +|+.+. ..++++||+||.|+..+|+.+|+.||.
T Consensus       151 ~~i~~~-~~~~~viv~pd~g~~~~A~~lA~~Lg~  183 (308)
T TIGR01251       151 EYLKKK-ILDNPVVVSPDAGGVERAKKVADALGC  183 (308)
T ss_pred             HHHHhh-CCCCCEEEEECCchHHHHHHHHHHhCC
Confidence            999774 257899999999999999999999984

In some systems, close homologs lacking enzymatic activity exist and perform regulatory functions. The model is designated subfamily rather than equivalog for this reason.

>PRK06827 phosphoribosylpyrophosphate synthetase; Provisional

Probab=100.00  E-value=2.2e-50  Score=371.51  Aligned_cols=186  Identities=15%  Similarity=0.143  Sum_probs=171.6

Q ss_pred             cCCCcEEEEecCCcHHHHHHHHHHc---------------C----C--CceeeeeEeecCCCCCeeEEEecCCCCCCeEE
Q 027833           12 SQKKQVHLFYCVECEELARKVAAQS---------------D----L--ITLQSINWRNFADGWPNLYINSAHDIRGQHVA   70 (218)
Q Consensus        12 ~~~~~~~i~~g~~~~~La~~Ia~~l---------------~----~--~~~~~~~~~~FpDG~~E~~v~i~~~vrG~dV~   70 (218)
                      -..+++.||+|+++.+||++||+.|               +    +  .+++++++++||||  |+|+++.+++||+|||
T Consensus         4 ~~~~~~~i~~~~~~~~la~~ia~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~FpDG--E~~vri~~~Vrg~dV~   81 (382)
T PRK06827          4 LPVGSLGIIALPSCRELADKVDEHLVRIRERKENENIESLAFKGYSRESYLIPAKFIRFSNG--EAKGEILESVRGKDIY   81 (382)
T ss_pred             CCCCceEEEECCCCHHHHHHHHHHHHHhhhhccccccccccccccCCcceeeeeEEEECCCC--CEEEEECCCCCCCeEE
Confidence            4557899999999999999999999               3    4  45999999999999  9999999999999999


Q ss_pred             EEEecCC--------------c--hhHHHHHHHHHhcccCCCCeEEEEeecCCCccccccCCCCCcchHHHHHHHHhcCC
Q 027833           71 FLASFSS--------------P--GVIFEQISVIYALPRLFVASFTLVLPFFPTGSFERMEEEGDVATAFTMARILSNIP  134 (218)
Q Consensus        71 Iiqs~~~--------------p--d~lmELlll~~alr~~ga~~ItlViPYl~YsRQDR~~~~Ge~vsak~va~lL~~~~  134 (218)
                      |+||+++              |  |++||||++++||| +||+|||+|+||||||||||+ .+|||+|+|++|+||+   
T Consensus        82 ivqs~~~~~v~~~~~~~~~~~p~nd~lmeLll~idalr-agA~rIt~ViPY~~YaRQDr~-~~~e~itak~vA~lL~---  156 (382)
T PRK06827         82 ILQDVGNYSVTYNMFGEKNHMSPDDHFQDLKRTIDAIR-GKARRITVIMPFLYESRQHKR-KGRESLDCALALQELE---  156 (382)
T ss_pred             EEecCCcccccccccccccCCCCcHHHHHHHHHHHHHh-cCCCeEEEEeecccccccccc-cCCCCccHHHHHHHHH---
Confidence            9999963              3  89999999999999 999999999999999999999 8999999999999999   


Q ss_pred             CCCCCCCEEEEEeCCchhhhcccc-ccccccccccHHHHHHHHhhCC-----CCCCEEEEeCCcccHHHHHHHHHHcCcc
Q 027833          135 TSRGGPTSLVIYDIHALQERFYFS-DHVLPLFETGIPLLKQRLHQLP-----DANNLLHFRMMEPGSDSTRCWIISLRWC  208 (218)
Q Consensus       135 ~~~~G~d~vitvDlHs~~~~~~F~-~~~~~l~~~~~~~l~~~l~~~~-----~~~~~vvvsPD~Ga~~ra~~~a~~l~~~  208 (218)
                        ++|+|+|||+|+|++++++||+ .|++|+  ++.+.+++|+.+..     +.++++|||||.||++||+.+|+.||+-
T Consensus       157 --~~G~d~vitvDlHs~~i~~~F~~~pvdnl--~a~~~l~~~i~~~i~~l~~d~~~~VVVsPD~Gg~~rA~~~A~~Lg~~  232 (382)
T PRK06827        157 --ELGVDNIITFDAHDPRIENAIPLMGFENL--YPSYQIIKALLKNEKDLEIDKDHLMVISPDTGAMDRAKYYASVLGVD  232 (382)
T ss_pred             --HcCCCeEEEecCChHHhcccCCCCCcCCc--CchHHHHHHHHHhcccccccCCCcEEEEECccchHHHHHHHHHhCCC
Confidence              8999999999999999999998 589999  99999999996531     3378999999999999999999999853

>KOG1448 consensus Ribose-phosphate pyrophosphokinase [Nucleotide transport and metabolism; Amino acid transport and metabolism]

Probab=100.00  E-value=2.1e-50  Score=356.29  Aligned_cols=187  Identities=25%  Similarity=0.352  Sum_probs=180.7

Q ss_pred             CCcEEEEecCCcHHHHHHHHHHcCCCceeeeeEeecCCCCCeeEEEecCCCCCCeEEEEEecCCc--hhHHHHHHHHHhc
Q 027833           14 KKQVHLFYCVECEELARKVAAQSDLITLQSINWRNFADGWPNLYINSAHDIRGQHVAFLASFSSP--GVIFEQISVIYAL   91 (218)
Q Consensus        14 ~~~~~i~~g~~~~~La~~Ia~~l~~~~~~~~~~~~FpDG~~E~~v~i~~~vrG~dV~Iiqs~~~p--d~lmELlll~~al   91 (218)
                      ++++.+|+|.++++||++||++| |++++++.+++|+||  |+++++.+++||+||+|+||.++|  |++||||+|++|+
T Consensus         1 ~~~i~lf~g~shp~La~~I~~~l-gi~l~~v~~kkf~ng--e~~v~i~esvR~~dV~iiqsgsg~ind~lmELLI~I~ac   77 (316)
T KOG1448|consen    1 MKNIKLFSGDSHPELAERIAARL-GIELGKVNLKKFSNG--ETSVQIGESVRGEDVYIIQSGSGPINDNLMELLIMINAC   77 (316)
T ss_pred             CCceEEEcCCCCHHHHHHHHHHh-CCCcceeeeEEccCC--cEEEecccccccCcEEEeccCCCcchHHHHHHHHHHHhc
Confidence            35789999999999999999999 899999999999999  999999999999999999999999  9999999999999


Q ss_pred             ccCCCCeEEEEeecCCCccccccCCCCCcchHHHHHHHHhcCCCCCCCCCEEEEEeCCchhhhccccccccccccccHHH
Q 027833           92 PRLFVASFTLVLPFFPTGSFERMEEEGDVATAFTMARILSNIPTSRGGPTSLVIYDIHALQERFYFSDHVLPLFETGIPL  171 (218)
Q Consensus        92 r~~ga~~ItlViPYl~YsRQDR~~~~Ge~vsak~va~lL~~~~~~~~G~d~vitvDlHs~~~~~~F~~~~~~l~~~~~~~  171 (218)
                      +.++|++||+|+|||||+||||+.+.+.++++|++|+||+     .+|+|++||+|+|..|.++||++|++|+  ++.|.
T Consensus        78 ~~asa~~vTaViP~Fpyarq~~k~~~r~~i~aklVanlls-----~aG~dhvItmDlHa~Q~qgfF~ipVdnl--y~~p~  150 (316)
T KOG1448|consen   78 KRASASRVTAVIPYFPYARQDKKDKSRAPILAKLVANLLS-----SAGADHVITMDLHASQIQGFFDIPVDNL--YAEPA  150 (316)
T ss_pred             chhhhheeEEeccCCccccchhhhhhhhhHHHHHHHhhhh-----ccCCceEEEecccchhhCceeeccchhh--ccchH
Confidence            9999999999999999999999999999999999999999     9999999999999999999999999999  99999


Q ss_pred             HHHHHhh-CCCCCCEEEEeCCcccHHHHHHHHHHcCcccc
Q 027833          172 LKQRLHQ-LPDANNLLHFRMMEPGSDSTRCWIISLRWCVP  210 (218)
Q Consensus       172 l~~~l~~-~~~~~~~vvvsPD~Ga~~ra~~~a~~l~~~~~  210 (218)
                      +.+|++. ..+.+|.++||||.||.||+..+|..|+.-+.
T Consensus       151 ~l~~ir~~~~~~~~~vivSPdaGgaKR~~s~ad~l~~~fa  190 (316)
T KOG1448|consen  151 VLNYIRENIPDSENAVIVSPDAGGAKRVTSLADRLNLDFA  190 (316)
T ss_pred             HHHHHHhhCCCccceEEECCCcchhhhhHHHHHhhcchhh
Confidence            9999987 56899999999999999999999999987655

>PLN02369 ribose-phosphate pyrophosphokinase

Probab=100.00  E-value=7.8e-50  Score=358.33  Aligned_cols=171  Identities=22%  Similarity=0.327  Sum_probs=163.1

Q ss_pred             HHHHHHHHHcCCCceeeeeEeecCCCCCeeEEEecCCCCCCeEEEEEecCCc--hhHHHHHHHHHhcccCCCCeEEEEee
Q 027833           27 ELARKVAAQSDLITLQSINWRNFADGWPNLYINSAHDIRGQHVAFLASFSSP--GVIFEQISVIYALPRLFVASFTLVLP  104 (218)
Q Consensus        27 ~La~~Ia~~l~~~~~~~~~~~~FpDG~~E~~v~i~~~vrG~dV~Iiqs~~~p--d~lmELlll~~alr~~ga~~ItlViP  104 (218)
                      +||++||+.| |++++.+++++||||  |+|+++.++++|++|+|+||+++|  |++||||++++|||++||++||+|+|
T Consensus         2 ~lA~~ia~~l-g~~l~~~~~~~FpdG--E~~v~i~~~v~g~~V~iv~s~~~p~nd~l~eLl~~~~a~r~~~a~~i~~ViP   78 (302)
T PLN02369          2 ALSQEIACYL-GLELGKITIKRFADG--EIYVQLQESVRGCDVFLVQPTCPPANENLMELLIMIDACRRASAKRITAVIP   78 (302)
T ss_pred             hHHHHHHHHh-CCceeeeEEEECCCC--CEEEEECCCCCCCeEEEEecCCCCcchHHHHHHHHHHHHHHcCCCeEEEEee
Confidence            6999999999 899999999999999  999999999999999999999866  89999999999999999999999999


Q ss_pred             cCCCccccccCCCCCcchHHHHHHHHhcCCCCCCCCCEEEEEeCCchhhhccccccccccccccHHHHHHHHhhC-CCCC
Q 027833          105 FFPTGSFERMEEEGDVATAFTMARILSNIPTSRGGPTSLVIYDIHALQERFYFSDHVLPLFETGIPLLKQRLHQL-PDAN  183 (218)
Q Consensus       105 Yl~YsRQDR~~~~Ge~vsak~va~lL~~~~~~~~G~d~vitvDlHs~~~~~~F~~~~~~l~~~~~~~l~~~l~~~-~~~~  183 (218)
                      |||||||||++++|||+|+|++|+||+     ++|+|+|+|+|+|++++++||++|++|+  ++.|.+++|+.+. .+.+
T Consensus        79 Yl~YsRQDr~~~~~e~isak~va~lL~-----~~g~d~vi~vDlHs~~i~~~F~ip~~~l--~~~~~~~~~i~~~~~~~~  151 (302)
T PLN02369         79 YFGYARADRKTQGRESIAAKLVANLIT-----EAGADRVLACDLHSGQSMGYFDIPVDHV--YGQPVILDYLASKTISSP  151 (302)
T ss_pred             cccccccccccCCCCCchHHHHHHHHH-----hcCCCEEEEEECCchHHhhccCCceecc--cchHHHHHHHHHhCCCCC
Confidence            999999999999999999999999999     8999999999999999999999999999  9999999999663 2347


Q ss_pred             CEEEEeCCcccHHHHHHHHHHcCc
Q 027833          184 NLLHFRMMEPGSDSTRCWIISLRW  207 (218)
Q Consensus       184 ~~vvvsPD~Ga~~ra~~~a~~l~~  207 (218)
                      +++||+||.||.+||+.+++.++.
T Consensus       152 ~~vvVspd~gg~~~a~~~a~~l~~  175 (302)
T PLN02369        152 DLVVVSPDVGGVARARAFAKKLSD  175 (302)
T ss_pred             ceEEEEECcChHHHHHHHHHHcCC
Confidence            899999999999999999999943

>KOG1503 consensus Phosphoribosylpyrophosphate synthetase-associated protein [Amino acid transport and metabolism; Nucleotide transport and metabolism]

Probab=100.00  E-value=3e-41  Score=292.09  Aligned_cols=190  Identities=21%  Similarity=0.263  Sum_probs=180.6

Q ss_pred             hhhcCCCcEEEEecCCcHHHHHHHHHHcCCCceeeeeEeecCCCCCeeEEEecCCCCCCeEEEEEecCCc--hhHHHHHH
Q 027833            9 AKKSQKKQVHLFYCVECEELARKVAAQSDLITLQSINWRNFADGWPNLYINSAHDIRGQHVAFLASFSSP--GVIFEQIS   86 (218)
Q Consensus         9 ~~~~~~~~~~i~~g~~~~~La~~Ia~~l~~~~~~~~~~~~FpDG~~E~~v~i~~~vrG~dV~Iiqs~~~p--d~lmELll   86 (218)
                      || ..+.++.+|+|+++++||+.|++.| |+++++..+.+-+|+  |+.|++.++||||||||+|+...+  .++||||+
T Consensus         2 ~n-~a~sg~vl~s~ns~~elak~vaerl-gi~~g~~~vy~~tnr--et~vei~~svrgkdvfiiqt~skdvn~~vmelli   77 (354)
T KOG1503|consen    2 MN-DASSGMVLFSGNSHPELAKMVAERL-GIELGKATVYQKTNR--ETRVEIKESVRGKDVFIIQTGSKDVNNDVMELLI   77 (354)
T ss_pred             CC-cccCCeEEEcCCCCHHHHHHHHHHh-cccccceEEEecCCC--ceEEEhhhhccCceEEEEEecCcccchHHHHHHH
Confidence            45 6778999999999999999999999 899999999999999  999999999999999999999887  89999999


Q ss_pred             HHHhcccCCCCeEEEEeecCCCccccccCCCCCcchHHHHHHHHhcCCCCCCCCCEEEEEeCCchhhhcccccccccccc
Q 027833           87 VIYALPRLFVASFTLVLPFFPTGSFERMEEEGDVATAFTMARILSNIPTSRGGPTSLVIYDIHALQERFYFSDHVLPLFE  166 (218)
Q Consensus        87 l~~alr~~ga~~ItlViPYl~YsRQDR~~~~Ge~vsak~va~lL~~~~~~~~G~d~vitvDlHs~~~~~~F~~~~~~l~~  166 (218)
                      |++|||.++|++|+.||||||||.|.|..+ +.++.+|++|.|+.     .+|..++||+|+|..++|+||++|++|+  
T Consensus        78 m~yackts~aksiigvipy~pyskqckmrk-rgsiv~klla~mmc-----kaglthlitmdlhqkeiqgff~~pvdnl--  149 (354)
T KOG1503|consen   78 MAYACKTSCAKSIIGVIPYLPYSKQCKMRK-RGSIVSKLLASMMC-----KAGLTHLITMDLHQKEIQGFFSIPVDNL--  149 (354)
T ss_pred             HHHHHhhhhhhceEEEeecCccchhhhhhh-cccHHHHHHHHHHH-----hcccceEEeehhhhHhhcceeccccccc--
Confidence            999999999999999999999999999955 77899999999999     9999999999999999999999999999  


Q ss_pred             ccHHHHHHHHhh-CCCCCCEEEEeCCcccHHHHHHHHHHcCcccc
Q 027833          167 TGIPLLKQRLHQ-LPDANNLLHFRMMEPGSDSTRCWIISLRWCVP  210 (218)
Q Consensus       167 ~~~~~l~~~l~~-~~~~~~~vvvsPD~Ga~~ra~~~a~~l~~~~~  210 (218)
                      .+.|+|.+|+.+ .++.+|.|||+-..|..+||+.+|+.|+.-+.
T Consensus       150 raspfllqyiqe~ipdyrnavivaksp~~akka~syaerlrlgla  194 (354)
T KOG1503|consen  150 RASPFLLQYIQEEIPDYRNAVIVAKSPGVAKKAQSYAERLRLGLA  194 (354)
T ss_pred             ccCHHHHHHHHHhCccccceEEEecCcchhhHHHhHHHHHhhcee
Confidence            999999999987 46899999999999999999999999877653

>PF13793 Pribosyltran_N: N-terminal domain of ribose phosphate pyrophosphokinase; PDB: 2JI4_A 1DKU_B 1IBS_B 1DKR_B 3MBI_C 3LRT_B 3LPN_B 3NAG_B 2H07_B 2H06_B

Probab=100.00  E-value=5.6e-41  Score=263.34  Aligned_cols=111  Identities=29%  Similarity=0.483  Sum_probs=97.3

Q ss_pred             EEEEecCCcHHHHHHHHHHcCCCceeeeeEeecCCCCCeeEEEecCCCCCCeEEEEEecCCc--hhHHHHHHHHHhcccC
Q 027833           17 VHLFYCVECEELARKVAAQSDLITLQSINWRNFADGWPNLYINSAHDIRGQHVAFLASFSSP--GVIFEQISVIYALPRL   94 (218)
Q Consensus        17 ~~i~~g~~~~~La~~Ia~~l~~~~~~~~~~~~FpDG~~E~~v~i~~~vrG~dV~Iiqs~~~p--d~lmELlll~~alr~~   94 (218)
                      |+||+|+++.+||++||+.| |++++++++++||||  |.|+++.++++|+||+|+||+++|  |++||||++++|+|++
T Consensus         1 m~I~~g~~~~~La~~ia~~L-~~~~~~~~~~~F~dG--E~~v~i~~~v~g~dv~iiqs~~~~~nd~lmeLll~i~a~r~~   77 (116)
T PF13793_consen    1 MVIFSGSSSQDLAERIAEAL-GIPLGKVETKRFPDG--ETYVRIPESVRGKDVFIIQSTSPPVNDNLMELLLLIDALRRA   77 (116)
T ss_dssp             EEEEESSSGHHHHHHHHHHT-TS-EE-EEEEE-TTS---EEEEESS--TTSEEEEE---SSSHHHHHHHHHHHHHHHHHT
T ss_pred             CEEEECCCCHHHHHHHHHHh-CCceeeeEEEEcCCC--CEEEEecccccCCceEEEEecCCchhHHHHHHHHHHHHHHHc
Confidence            68999999999999999999 999999999999999  999999999999999999999988  9999999999999999


Q ss_pred             CCCeEEEEeecCCCccccccCCCCCcchHHHHHHHHh
Q 027833           95 FVASFTLVLPFFPTGSFERMEEEGDVATAFTMARILS  131 (218)
Q Consensus        95 ga~~ItlViPYl~YsRQDR~~~~Ge~vsak~va~lL~  131 (218)
                      ||++||+|+||||||||||+ .+|||+|++++|+||+
T Consensus        78 ~a~~i~~ViPYl~YaRQDr~-~~ge~isak~~a~lL~  113 (116)
T PF13793_consen   78 GAKRITLVIPYLPYARQDRR-KPGEPISAKVVAKLLS  113 (116)
T ss_dssp             TBSEEEEEESS-TTTTSSSS-STTC--HHHHHHHHHH
T ss_pred             CCcEEEEeccchhhhhhccC-CCCCcchHHHHHHHHH
Confidence            99999999999999999999 9999999999999999

...

>TIGR01251 ribP_PPkin ribose-phosphate pyrophosphokinase

Probab=98.84  E-value=1.5e-07  Score=85.02  Aligned_cols=137  Identities=16%  Similarity=0.131  Sum_probs=106.7

Q ss_pred             CCcEEEEecCCcHHHHHHHHHHcCCCceeeeeEeec-CCCCCeeEEE-ecCCCCCCeEEEEEecCCchhHHHHHHHHHhc
Q 027833           14 KKQVHLFYCVECEELARKVAAQSDLITLQSINWRNF-ADGWPNLYIN-SAHDIRGQHVAFLASFSSPGVIFEQISVIYAL   91 (218)
Q Consensus        14 ~~~~~i~~g~~~~~La~~Ia~~l~~~~~~~~~~~~F-pDG~~E~~v~-i~~~vrG~dV~Iiqs~~~pd~lmELlll~~al   91 (218)
                      +..+++-...++..+|..+|+.| |.++..++-.++ ++|  |.... +..+++|++|+|+.++.+...  .++..++++
T Consensus       159 ~~~viv~pd~g~~~~A~~lA~~L-g~~~~~i~k~r~~~~~--~~~~~~~~~~v~g~~vliVDDii~tG~--Tl~~a~~~l  233 (308)
T TIGR01251       159 DNPVVVSPDAGGVERAKKVADAL-GCPLAIIDKRRISATN--EVEVMNLVGDVEGKDVVIVDDIIDTGG--TIAKAAEIL  233 (308)
T ss_pred             CCCEEEEECCchHHHHHHHHHHh-CCCEEEEEEEecCCCC--EEEEEecccccCCCEEEEEccccCCHH--HHHHHHHHH
Confidence            34566666666778999999999 899998888888 888  76654 356899999999999987744  567778999


Q ss_pred             ccCCCCeEEEEeecCCCccccccCCCCCcchHHHHHHHHhcCCCCCCCCCEEEEEeCCchhhhccccccccccccccHHH
Q 027833           92 PRLFVASFTLVLPFFPTGSFERMEEEGDVATAFTMARILSNIPTSRGGPTSLVIYDIHALQERFYFSDHVLPLFETGIPL  171 (218)
Q Consensus        92 r~~ga~~ItlViPYl~YsRQDR~~~~Ge~vsak~va~lL~~~~~~~~G~d~vitvDlHs~~~~~~F~~~~~~l~~~~~~~  171 (218)
                      ++.||++|.++.|.        ...+|     ..+.++.+      .|+++|++.|.|...  .+|+ ++..+  +..+.
T Consensus       234 ~~~ga~~v~~~~th--------~v~~~-----~a~~~l~~------~~~~~iv~tdt~~~~--~~~~-~~~~v--~va~~  289 (308)
T TIGR01251       234 KSAGAKRVIAAATH--------GVFSG-----PAIERIAN------AGVEEVIVTNTIPHE--KHKP-KVSVI--SVAPL  289 (308)
T ss_pred             HhcCCCEEEEEEEe--------eecCc-----HHHHHHHh------CCCCEEEEeCCCCcc--ccCC-CcEEE--EhHHH
Confidence            99999999999983        11223     33466665      689999999999864  3454 67778  88999


Q ss_pred             HHHHHhhC
Q 027833          172 LKQRLHQL  179 (218)
Q Consensus       172 l~~~l~~~  179 (218)
                      +++.+...
T Consensus       290 la~~i~~~  297 (308)
T TIGR01251       290 IAEAIRRI  297 (308)
T ss_pred             HHHHHHHH
Confidence            99999764

In some systems, close homologs lacking enzymatic activity exist and perform regulatory functions. The model is designated subfamily rather than equivalog for this reason.

>PRK07199 phosphoribosylpyrophosphate synthetase; Provisional

Probab=97.58  E-value=0.0046  Score=55.94  Aligned_cols=132  Identities=17%  Similarity=0.102  Sum_probs=94.1

Q ss_pred             CCcEEEEecCCcHHHHHHHHHHcCCCceeeeeEeecCCCCCeeEEEe--cCCCCCCeEEEEEecCCchhHHHHHHHHHhc
Q 027833           14 KKQVHLFYCVECEELARKVAAQSDLITLQSINWRNFADGWPNLYINS--AHDIRGQHVAFLASFSSPGVIFEQISVIYAL   91 (218)
Q Consensus        14 ~~~~~i~~g~~~~~La~~Ia~~l~~~~~~~~~~~~FpDG~~E~~v~i--~~~vrG~dV~Iiqs~~~pd~lmELlll~~al   91 (218)
                      +..+++-+..+...+++.+|+.+ +.++.-..-.+..++  +..+..  ..+++|++|+||..+.+.-.-  +.-.+..|
T Consensus       160 ~~~vVVsPd~g~~~~a~~la~~l-~~~~~~~~K~R~~~~--~~~~~~~~~~~v~Gr~vIIVDDIidTG~T--l~~aa~~L  234 (301)
T PRK07199        160 PRPLLIGPDEESEQWVAAVAERA-GAPHAVLRKTRHGDR--DVEISLPDAAPWAGRTPVLVDDIVSTGRT--LIEAARQL  234 (301)
T ss_pred             CCcEEEEeCCChHHHHHHHHHHh-CCCEEEEEEEecCCC--eEEEEeccCcccCCCEEEEEecccCcHHH--HHHHHHHH
Confidence            34566666667778999999999 898876666666666  444433  357899999999888766332  33567889


Q ss_pred             ccCCCCeEEEEeecCCCccccccCCCCCcchHHHHHHHHhcCCCCCCCCCEEEEEeCCchhhhccccccccccccccHHH
Q 027833           92 PRLFVASFTLVLPFFPTGSFERMEEEGDVATAFTMARILSNIPTSRGGPTSLVIYDIHALQERFYFSDHVLPLFETGIPL  171 (218)
Q Consensus        92 r~~ga~~ItlViPYl~YsRQDR~~~~Ge~vsak~va~lL~~~~~~~~G~d~vitvDlHs~~~~~~F~~~~~~l~~~~~~~  171 (218)
                      |+.||++|.++.-.-             .++.....++..      .|+++|++-|-+...        ..-+  +..|+
T Consensus       235 k~~GA~~V~~~~tHg-------------vfs~~a~~~l~~------~~i~~iv~Tdti~~~--------~~~~--sva~l  285 (301)
T PRK07199        235 RAAGAASPDCVVVHA-------------LFAGDAYSALAA------AGIARVVSTDTVPHP--------SNAI--SLAPL  285 (301)
T ss_pred             HHCCCcEEEEEEEee-------------eCChHHHHHHHh------CCCCEEEEeCCccCC--------CCEE--ehHHH
Confidence            999999999987431             334445555554      789999999987421        1235  77899


Q ss_pred             HHHHHhhC
Q 027833          172 LKQRLHQL  179 (218)
Q Consensus       172 l~~~l~~~  179 (218)
                      +++.|+..
T Consensus       286 la~~i~~~  293 (301)
T PRK07199        286 LAEALRRE  293 (301)
T ss_pred             HHHHHHHH
Confidence            99999763

>PRK03092 ribose-phosphate pyrophosphokinase; Provisional

Probab=97.55  E-value=0.0063  Score=55.15  Aligned_cols=139  Identities=15%  Similarity=0.126  Sum_probs=95.7

Q ss_pred             CCcEEEEecCCcHHHHHHHHHHcCC-CceeeeeEeecCC--CCCeeEEEecCCCCCCeEEEEEecCCc-hhHHHHHHHHH
Q 027833           14 KKQVHLFYCVECEELARKVAAQSDL-ITLQSINWRNFAD--GWPNLYINSAHDIRGQHVAFLASFSSP-GVIFEQISVIY   89 (218)
Q Consensus        14 ~~~~~i~~g~~~~~La~~Ia~~l~~-~~~~~~~~~~FpD--G~~E~~v~i~~~vrG~dV~Iiqs~~~p-d~lmELlll~~   89 (218)
                      +..++|-...++..+|+.+++.| + .++..+.-.+..+  | .+....+..++.|++|+||..+.+. ..+   ...++
T Consensus       148 ~~~vvVspd~Ga~~~a~~la~~L-~~~~~~~i~k~R~~~~~~-~~~~~~~~~dv~gr~viIVDDIi~TG~Tl---~~aa~  222 (304)
T PRK03092        148 DNVTVVSPDAGRVRVAEQWADRL-GGAPLAFIHKTRDPTVPN-QVVANRVVGDVEGRTCVLVDDMIDTGGTI---AGAVR  222 (304)
T ss_pred             CCcEEEEecCchHHHHHHHHHHc-CCCCEEEEEEEcccCCCC-ceEEEecCcCCCCCEEEEEccccCcHHHH---HHHHH
Confidence            44566666677888999999999 7 8887777666433  2 1234556778999999999888766 333   35568


Q ss_pred             hcccCCCCeEEEEeecCCCccccccCCCCCcchHHHHHHHHhcCCCCCCCCCEEEEEeCCchhhhccccccccccccccH
Q 027833           90 ALPRLFVASFTLVLPFFPTGSFERMEEEGDVATAFTMARILSNIPTSRGGPTSLVIYDIHALQERFYFSDHVLPLFETGI  169 (218)
Q Consensus        90 alr~~ga~~ItlViPYl~YsRQDR~~~~Ge~vsak~va~lL~~~~~~~~G~d~vitvDlHs~~~~~~F~~~~~~l~~~~~  169 (218)
                      .|++.||++|.++.-+-             .++...+-++.+      .|+++|++-|-+..... ....++..+  +..
T Consensus       223 ~Lk~~Ga~~I~~~~tH~-------------v~~~~a~~~l~~------~~~~~i~~t~tip~~~~-~~~~~~~~~--sva  280 (304)
T PRK03092        223 ALKEAGAKDVIIAATHG-------------VLSGPAAERLKN------CGAREVVVTDTLPIPEE-KRFDKLTVL--SIA  280 (304)
T ss_pred             HHHhcCCCeEEEEEEcc-------------cCChHHHHHHHH------CCCCEEEEeeeeccchh-hcCCCeEEE--EhH
Confidence            88999999999987321             223334445555      68999999998732111 112345556  778


Q ss_pred             HHHHHHHhhC
Q 027833          170 PLLKQRLHQL  179 (218)
Q Consensus       170 ~~l~~~l~~~  179 (218)
                      +.++++|+..
T Consensus       281 ~~la~~i~~~  290 (304)
T PRK03092        281 PLLARAIREV  290 (304)
T ss_pred             HHHHHHHHHH
Confidence            9999998764

>PRK00934 ribose-phosphate pyrophosphokinase; Provisional

Probab=97.51  E-value=0.0045  Score=55.46  Aligned_cols=128  Identities=16%  Similarity=0.163  Sum_probs=89.6

Q ss_pred             CcEEEEecCCcHHHHHHHHHHcCCCceeeeeEeecCCCCCeeEEEe-cCCCCCCeEEEEEecCCc-hhHHHHHHHHHhcc
Q 027833           15 KQVHLFYCVECEELARKVAAQSDLITLQSINWRNFADGWPNLYINS-AHDIRGQHVAFLASFSSP-GVIFEQISVIYALP   92 (218)
Q Consensus        15 ~~~~i~~g~~~~~La~~Ia~~l~~~~~~~~~~~~FpDG~~E~~v~i-~~~vrG~dV~Iiqs~~~p-d~lmELlll~~alr   92 (218)
                      ..+++-...++..+|..+|+.+ +.++..+.-.+..++  +..+.. ..+++|++|+||..+.+. ..+.   -.+.+|+
T Consensus       155 ~~vvv~pd~Ga~~~a~~lA~~l-~~~~~~i~k~r~~~~--~~~~~~~~~~v~Gk~VlIVDDIi~TG~Tl~---~aa~~Lk  228 (285)
T PRK00934        155 DPLVLAPDKGALELAKEAAEIL-GCEYDYLEKTRISPT--EVEIAPKNLDVKGKDVLIVDDIISTGGTMA---TAIKILK  228 (285)
T ss_pred             CCEEEEeCCchHHHHHHHHHHh-CCCEEEEEEEecCCC--eEEEeccccccCCCEEEEEcCccccHHHHH---HHHHHHH
Confidence            3456656666788999999999 899877666666665  554432 246899999999888766 4433   4557788


Q ss_pred             cCCCCeEEEEeecCCCccccccCCCCCcchHHHHHHHHhcCCCCCCCCCEEEEEeCCchhhhccccccccccccccHHHH
Q 027833           93 RLFVASFTLVLPFFPTGSFERMEEEGDVATAFTMARILSNIPTSRGGPTSLVIYDIHALQERFYFSDHVLPLFETGIPLL  172 (218)
Q Consensus        93 ~~ga~~ItlViPYl~YsRQDR~~~~Ge~vsak~va~lL~~~~~~~~G~d~vitvDlHs~~~~~~F~~~~~~l~~~~~~~l  172 (218)
                      +.||++|.++.-+-             .++....-++.+      .|+++|++-|-+..        ++..+  +..|+|
T Consensus       229 ~~GA~~V~~~~~H~-------------i~~~~a~~~l~~------~~i~~i~~tnti~~--------~~~~~--~va~~l  279 (285)
T PRK00934        229 EQGAKKVYVACVHP-------------VLVGDAILKLYN------AGVDEIIVTDTLES--------EVSKI--SVAPLI  279 (285)
T ss_pred             HCCCCEEEEEEEee-------------ccCcHHHHHHHh------CCCCEEEEcCCCCC--------CceEE--EcHHHH
Confidence            99999998887431             122233334444      78999999999842        23345  778999


Q ss_pred             HHHHh
Q 027833          173 KQRLH  177 (218)
Q Consensus       173 ~~~l~  177 (218)
                      +++|+
T Consensus       280 a~~i~  284 (285)
T PRK00934        280 ADLLK  284 (285)
T ss_pred             HHHHh
Confidence            99885

>PRK04923 ribose-phosphate pyrophosphokinase; Provisional

Probab=97.47  E-value=0.0067  Score=55.40  Aligned_cols=141  Identities=16%  Similarity=0.095  Sum_probs=95.3

Q ss_pred             CCcEEEEecCCcHHHHHHHHHHcCC-CceeeeeEeecCCCCCeeEEEecCCCCCCeEEEEEecCCchhHHHHHHHHHhcc
Q 027833           14 KKQVHLFYCVECEELARKVAAQSDL-ITLQSINWRNFADGWPNLYINSAHDIRGQHVAFLASFSSPGVIFEQISVIYALP   92 (218)
Q Consensus        14 ~~~~~i~~g~~~~~La~~Ia~~l~~-~~~~~~~~~~FpDG~~E~~v~i~~~vrG~dV~Iiqs~~~pd~lmELlll~~alr   92 (218)
                      ...+++-+..++...|+.+|+.| + .++....-.+..+++ +.-..+..+++|++++||..+.+.-.-  +...+.+|+
T Consensus       166 ~~~vVVsPD~Ga~~rA~~lA~~L-~~~~~~~~~K~R~~~~~-~~~~~~~gdv~Gr~viIVDDIidTG~T--l~~aa~~Lk  241 (319)
T PRK04923        166 DNLIVVSPDVGGVVRARAVAKRL-DDADLAIIDKRRPRANV-ATVMNIIGDVQGKTCVLVDDLVDTAGT--LCAAAAALK  241 (319)
T ss_pred             CCCEEEEECCchHHHHHHHHHHc-CCCCEEEeccccCCCCc-eEEEecccCCCCCEEEEEecccCchHH--HHHHHHHHH
Confidence            34566666667788999999999 6 677655555544431 233455578999999999888766322  445678899


Q ss_pred             cCCCCeEEEEeecCCCccccccCCCCCcchHHHHHHHHhcCCCCCCCCCEEEEEeCCchhhhccccccccccccccHHHH
Q 027833           93 RLFVASFTLVLPFFPTGSFERMEEEGDVATAFTMARILSNIPTSRGGPTSLVIYDIHALQERFYFSDHVLPLFETGIPLL  172 (218)
Q Consensus        93 ~~ga~~ItlViPYl~YsRQDR~~~~Ge~vsak~va~lL~~~~~~~~G~d~vitvDlHs~~~~~~F~~~~~~l~~~~~~~l  172 (218)
                      +.||++|.++.-.-             .++...+-++.      ..|+++|++=|-+..........++..+  +..|++
T Consensus       242 ~~GA~~V~~~~THg-------------vfs~~a~~~l~------~s~i~~iv~Tdtip~~~~~~~~~k~~~i--sva~ll  300 (319)
T PRK04923        242 QRGALKVVAYITHP-------------VLSGPAVDNIN------NSQLDELVVTDTIPLSEAARACAKIRQL--SVAELL  300 (319)
T ss_pred             HCCCCEEEEEEECc-------------ccCchHHHHHh------hCCCCEEEEeCCccCchhhcccCCeEEE--EhHHHH
Confidence            99999999987652             23334445554      4789999999987422111111245556  778999


Q ss_pred             HHHHhhC
Q 027833          173 KQRLHQL  179 (218)
Q Consensus       173 ~~~l~~~  179 (218)
                      ++.|+..
T Consensus       301 a~~i~~~  307 (319)
T PRK04923        301 AETIRRI  307 (319)
T ss_pred             HHHHHHH
Confidence            9998764

>PRK02269 ribose-phosphate pyrophosphokinase; Provisional

Probab=97.29  E-value=0.012  Score=53.70  Aligned_cols=141  Identities=16%  Similarity=0.086  Sum_probs=93.8

Q ss_pred             CCcEEEEecCCcHHHHHHHHHHcCCCceeeeeEeecCC-CCCeeEEEecCCCCCCeEEEEEecCCchhHHHHHHHHHhcc
Q 027833           14 KKQVHLFYCVECEELARKVAAQSDLITLQSINWRNFAD-GWPNLYINSAHDIRGQHVAFLASFSSPGVIFEQISVIYALP   92 (218)
Q Consensus        14 ~~~~~i~~g~~~~~La~~Ia~~l~~~~~~~~~~~~FpD-G~~E~~v~i~~~vrG~dV~Iiqs~~~pd~lmELlll~~alr   92 (218)
                      ...++|=...++..+|+.+|+.| +.++...+-++-.+ +.-+....+..+++|++|+||..+.+.-.-  +...+.+|+
T Consensus       165 ~~~vvVsPd~G~~~~A~~lA~~l-g~~~~~~~k~r~~~~~~~~~~~~~~gdv~Gr~viIVDDIidTG~T--l~~aa~~Lk  241 (320)
T PRK02269        165 DDVVVVSPDHGGVTRARKLAQFL-KTPIAIIDKRRSVDKMNTSEVMNIIGNVKGKKCILIDDMIDTAGT--ICHAADALA  241 (320)
T ss_pred             CCcEEEEECccHHHHHHHHHHHh-CCCEEEEEecccCCCCceeEEEEeccccCCCEEEEEeeecCcHHH--HHHHHHHHH
Confidence            34455656666778999999999 88876544433222 100222345568999999999888766222  445678888


Q ss_pred             cCCCCeEEEEeecCCCccccccCCCCCcchHHHHHHHHhcCCCCCCCCCEEEEEeCCchhhhccccccccccccccHHHH
Q 027833           93 RLFVASFTLVLPFFPTGSFERMEEEGDVATAFTMARILSNIPTSRGGPTSLVIYDIHALQERFYFSDHVLPLFETGIPLL  172 (218)
Q Consensus        93 ~~ga~~ItlViPYl~YsRQDR~~~~Ge~vsak~va~lL~~~~~~~~G~d~vitvDlHs~~~~~~F~~~~~~l~~~~~~~l  172 (218)
                      +.||++|.++.-.-             .++....-++.+      .|+++|++-|-+..... .+..++..+  +..|++
T Consensus       242 ~~GA~~V~~~~tHg-------------lf~~~a~~~l~~------~~i~~iv~Tdti~~~~~-~~~~k~~~i--sva~~l  299 (320)
T PRK02269        242 EAGATEVYASCTHP-------------VLSGPALDNIQK------SAIEKLVVLDTIYLPEE-RLIDKIEQI--SIADLL  299 (320)
T ss_pred             HCCCCEEEEEEECc-------------ccCchHHHHHHh------CCCCEEEEeCCCCCccc-cccCCeEEE--EhHHHH
Confidence            99999999887652             333444455544      78999999998732111 122345566  778999


Q ss_pred             HHHHhhC
Q 027833          173 KQRLHQL  179 (218)
Q Consensus       173 ~~~l~~~  179 (218)
                      ++.|+..
T Consensus       300 a~~i~~~  306 (320)
T PRK02269        300 GEAIIRI  306 (320)
T ss_pred             HHHHHHH
Confidence            9999764

>PRK13811 orotate phosphoribosyltransferase; Provisional

Probab=97.29  E-value=0.00055  Score=56.84  Aligned_cols=76  Identities=9%  Similarity=-0.016  Sum_probs=57.5

Q ss_pred             HHHHHHHhcCCCCCCCCCEEEEEeCCchhhhccccccccccccccHHHHHHHHhhCC--CCCCEEEEeCCcccHHHHHHH
Q 027833          124 FTMARILSNIPTSRGGPTSLVIYDIHALQERFYFSDHVLPLFETGIPLLKQRLHQLP--DANNLLHFRMMEPGSDSTRCW  201 (218)
Q Consensus       124 k~va~lL~~~~~~~~G~d~vitvDlHs~~~~~~F~~~~~~l~~~~~~~l~~~l~~~~--~~~~~vvvsPD~Ga~~ra~~~  201 (218)
                      ..++++|.     ..|++++-++|+||.+.++|| ..+..+  ...|.+.+++....  ..+-.+|++|+.|+...|..+
T Consensus         3 ~~~~~~l~-----~~ga~~~g~f~L~SG~~s~~y-~d~~~l--~~~p~~~~~l~~~l~~~~~~d~Vvg~~~gGi~~A~~~   74 (170)
T PRK13811          3 NTIAELLI-----SYKAIEFGDFTLASGAKSRYY-IDIKTA--ITHPALLKEIAAEVAKRYDFDVVAGVAVGGVPLAVAV   74 (170)
T ss_pred             HHHHHHHH-----HCCCEEECCEEEccCCcCCEE-EeCchh--ccCHHHHHHHHHHHHhhCCCCEEEecCcCcHHHHHHH
Confidence            46789998     899999999999999999998 233345  44555555543310  123458999999999999999


Q ss_pred             HHHcCc
Q 027833          202 IISLRW  207 (218)
Q Consensus       202 a~~l~~  207 (218)
                      |..||.
T Consensus        75 a~~l~~   80 (170)
T PRK13811         75 SLAAGK   80 (170)
T ss_pred             HHHHCC
Confidence            999984

>PRK02458 ribose-phosphate pyrophosphokinase; Provisional

Probab=97.27  E-value=0.01  Score=54.31  Aligned_cols=137  Identities=12%  Similarity=0.022  Sum_probs=91.2

Q ss_pred             CcEEEEecCCcHHHHHHHHHHcCCCceeeeeEeecCCCCCeeEEEecCCCCCCeEEEEEecCCchhHHHHHHHHHhcccC
Q 027833           15 KQVHLFYCVECEELARKVAAQSDLITLQSINWRNFADGWPNLYINSAHDIRGQHVAFLASFSSPGVIFEQISVIYALPRL   94 (218)
Q Consensus        15 ~~~~i~~g~~~~~La~~Ia~~l~~~~~~~~~~~~FpDG~~E~~v~i~~~vrG~dV~Iiqs~~~pd~lmELlll~~alr~~   94 (218)
                      ..+++=...++..+|+.+++.| ++++.-....+ .+.+ +....+..+++|++|+||..+.+.-.-  +...+.+|++.
T Consensus       170 ~~vvV~pd~Ga~~~A~~la~~L-~~~~~~~~~~r-~~~~-~~~~~i~gdV~gk~viIVDDIidTG~T--l~~aa~~Lk~~  244 (323)
T PRK02458        170 DVVVVSPKNSGIKRARSLAEYL-DAPIAIIDYAQ-DDSE-REEGYIIGDVAGKKAILIDDILNTGKT--FAEAAKIVERE  244 (323)
T ss_pred             ceEEEEECCChHHHHHHHHHHh-CCCEEEEEEec-CCCc-ceeeccccccCCCEEEEEcceeCcHHH--HHHHHHHHHhC
Confidence            3344555556778999999999 88876555333 2321 222234568999999999887766222  44567889999


Q ss_pred             CCCeEEEEeecCCCccccccCCCCCcchHHHHHHHHhcCCCCCCCCCEEEEEeCCchhhhccccccccccccccHHHHHH
Q 027833           95 FVASFTLVLPFFPTGSFERMEEEGDVATAFTMARILSNIPTSRGGPTSLVIYDIHALQERFYFSDHVLPLFETGIPLLKQ  174 (218)
Q Consensus        95 ga~~ItlViPYl~YsRQDR~~~~Ge~vsak~va~lL~~~~~~~~G~d~vitvDlHs~~~~~~F~~~~~~l~~~~~~~l~~  174 (218)
                      ||++|.++.-.-             .++.....++.      ..|+++|++=|-+.... ... .++..+  +..+++++
T Consensus       245 GA~~V~~~~tHg-------------if~~~a~~~l~------~s~i~~iv~TdTi~~~~-~~~-~k~~~i--sva~lla~  301 (323)
T PRK02458        245 GATEIYAVASHG-------------LFAGGAAEVLE------NAPIKEILVTDSVATKE-RVP-KNVTYL--SASELIAD  301 (323)
T ss_pred             CCCcEEEEEECh-------------hcCchHHHHHh------hCCCCEEEEECCcCCch-hcC-CCcEEE--EhHHHHHH
Confidence            999999987653             33333433444      47999999999985321 111 234556  77899999


Q ss_pred             HHhhC
Q 027833          175 RLHQL  179 (218)
Q Consensus       175 ~l~~~  179 (218)
                      .|++.
T Consensus       302 ~i~~~  306 (323)
T PRK02458        302 AIIRI  306 (323)
T ss_pred             HHHHH
Confidence            98764

>PLN02369 ribose-phosphate pyrophosphokinase

Probab=97.15  E-value=0.022  Score=51.54  Aligned_cols=135  Identities=16%  Similarity=0.142  Sum_probs=91.3

Q ss_pred             EEEEecCCcHHHHHHHHHHcCCCceeeeeEeecCCCCCeeEEEecCCCCCCeEEEEEecCCc-hhHHHHHHHHHhcccCC
Q 027833           17 VHLFYCVECEELARKVAAQSDLITLQSINWRNFADGWPNLYINSAHDIRGQHVAFLASFSSP-GVIFEQISVIYALPRLF   95 (218)
Q Consensus        17 ~~i~~g~~~~~La~~Ia~~l~~~~~~~~~~~~FpDG~~E~~v~i~~~vrG~dV~Iiqs~~~p-d~lmELlll~~alr~~g   95 (218)
                      +++-.-.++..+++.+++.+.+.++..+.-.+..++. +....+..++.|++|+|+..+.+. ..   +...+++|++.|
T Consensus       154 vvVspd~gg~~~a~~~a~~l~~~~~~~l~k~R~~~~~-~~~~~~~~~v~g~~viivDDii~TG~T---l~~a~~~l~~~G  229 (302)
T PLN02369        154 VVVSPDVGGVARARAFAKKLSDAPLAIVDKRRQGHNV-AEVMNLIGDVKGKVAIMVDDMIDTAGT---ITKGAALLHQEG  229 (302)
T ss_pred             EEEEECcChHHHHHHHHHHcCCCCEEEEEEecCCcce-eeeEecCCCCCCCEEEEEcCcccchHH---HHHHHHHHHhCC
Confidence            4444455677899999999834777766666544441 123456778999999999887665 33   344557889999


Q ss_pred             CCeEEEEe--ecCCCccccccCCCCCcchHHHHHHHHhcCCCCCCCCCEEEEEeCCchhhhccccccccccccccHHHHH
Q 027833           96 VASFTLVL--PFFPTGSFERMEEEGDVATAFTMARILSNIPTSRGGPTSLVIYDIHALQERFYFSDHVLPLFETGIPLLK  173 (218)
Q Consensus        96 a~~ItlVi--PYl~YsRQDR~~~~Ge~vsak~va~lL~~~~~~~~G~d~vitvDlHs~~~~~~F~~~~~~l~~~~~~~l~  173 (218)
                      +++|.++.  |-|               +...+- .|+     ..+++.+++.|-+.......|+ ++..+  +..++|+
T Consensus       230 a~~v~~~~tH~v~---------------~~~a~~-~l~-----~~~~~~iv~t~ti~~~~~~~~~-~~~~~--~v~~~la  285 (302)
T PLN02369        230 AREVYACATHAVF---------------SPPAIE-RLS-----SGLFQEVIVTNTIPVSEKNYFP-QLTVL--SVANLLG  285 (302)
T ss_pred             CCEEEEEEEeeee---------------CHHHHH-HHH-----hCCCCEEEEeCCCCChhhcccC-CceEE--EHHHHHH
Confidence            99999987  443               222333 344     4689999999987532212233 56666  7789999


Q ss_pred             HHHhhC
Q 027833          174 QRLHQL  179 (218)
Q Consensus       174 ~~l~~~  179 (218)
                      +.++..
T Consensus       286 ~~i~~~  291 (302)
T PLN02369        286 ETIWRV  291 (302)
T ss_pred             HHHHHH
Confidence            998764

>COG0462 PrsA Phosphoribosylpyrophosphate synthetase [Nucleotide transport and metabolism / Amino acid transport and metabolism]

Probab=97.05  E-value=0.02  Score=52.31  Aligned_cols=136  Identities=15%  Similarity=0.103  Sum_probs=93.7

Q ss_pred             cEEEEe-cCCcHHHHHHHHHHcCCCceeeeeEeec-CCCCCeeEEEe-cCCCCCCeEEEEEecCCc-hhHHHHHHHHHhc
Q 027833           16 QVHLFY-CVECEELARKVAAQSDLITLQSINWRNF-ADGWPNLYINS-AHDIRGQHVAFLASFSSP-GVIFEQISVIYAL   91 (218)
Q Consensus        16 ~~~i~~-g~~~~~La~~Ia~~l~~~~~~~~~~~~F-pDG~~E~~v~i-~~~vrG~dV~Iiqs~~~p-d~lmELlll~~al   91 (218)
                      +++|+| -.+...-|+.+|+.| +.++.-++=+|- .+.  |..+.. .-+|+||+++|+..+-+. ..   +...+.+|
T Consensus       164 d~vVVSPD~Ggv~RAr~~A~~L-~~~~a~i~K~R~~~~~--~v~~~~~~gdV~gk~~iiVDDiIdTgGT---i~~Aa~~L  237 (314)
T COG0462         164 DPVVVSPDKGGVKRARALADRL-GAPLAIIDKRRDSSPN--VVEVMNLIGDVEGKDVVIVDDIIDTGGT---IAKAAKAL  237 (314)
T ss_pred             CcEEECCCccHHHHHHHHHHHh-CCCEEEEEEeecCCCC--eEEEeecccccCCCEEEEEeccccccHH---HHHHHHHH
Confidence            444444 445667899999999 899887777775 445  555543 469999999999776544 33   35577889


Q ss_pred             ccCCCCeEEEEeecCCCccccccCCCCCcchHHHHHHHHhcCCCCCCCCCEEEEEeCCchhhhccccccccccccccHHH
Q 027833           92 PRLFVASFTLVLPFFPTGSFERMEEEGDVATAFTMARILSNIPTSRGGPTSLVIYDIHALQERFYFSDHVLPLFETGIPL  171 (218)
Q Consensus        92 r~~ga~~ItlViPYl~YsRQDR~~~~Ge~vsak~va~lL~~~~~~~~G~d~vitvDlHs~~~~~~F~~~~~~l~~~~~~~  171 (218)
                      ++.||++|.+..-.=             .+| .-..+.|+     ...+++||+-|-=-......++ .+..+  +..|+
T Consensus       238 k~~GAk~V~a~~tH~-------------vfs-~~a~~~l~-----~~~i~~vivTnTi~~~~~~~~~-~~~~i--sva~l  295 (314)
T COG0462         238 KERGAKKVYAAATHG-------------VFS-GAALERLE-----ASAIDEVIVTDTIPLPEKKKIP-KVSVI--SVAPL  295 (314)
T ss_pred             HHCCCCeEEEEEEch-------------hhC-hHHHHHHh-----cCCCCEEEEeCCcccccccccC-ceEEE--EhHHH
Confidence            999999999876432             222 44556777     5669999998843221111222 55666  88999


Q ss_pred             HHHHHhhC
Q 027833          172 LKQRLHQL  179 (218)
Q Consensus       172 l~~~l~~~  179 (218)
                      ++++|...
T Consensus       296 iaeaI~ri  303 (314)
T COG0462         296 IAEAIRRI  303 (314)
T ss_pred             HHHHHHHH
Confidence            99999774

>PRK01259 ribose-phosphate pyrophosphokinase; Provisional

Probab=97.05  E-value=0.03  Score=50.83  Aligned_cols=139  Identities=19%  Similarity=0.103  Sum_probs=93.3

Q ss_pred             CcEEEEecCCcHHHHHHHHHHcCCCceeeeeEeecCCCCCeeE-EEecCCCCCCeEEEEEecCCchhHHHHHHHHHhccc
Q 027833           15 KQVHLFYCVECEELARKVAAQSDLITLQSINWRNFADGWPNLY-INSAHDIRGQHVAFLASFSSPGVIFEQISVIYALPR   93 (218)
Q Consensus        15 ~~~~i~~g~~~~~La~~Ia~~l~~~~~~~~~~~~FpDG~~E~~-v~i~~~vrG~dV~Iiqs~~~pd~lmELlll~~alr~   93 (218)
                      ..+++=...++..+|+.+|+.| |.++...+-.+..++  +.. ..+..+++|++|+|+..+.+.-.-  +...++.+++
T Consensus       159 ~~vvv~pd~Gg~~~A~~la~~L-g~~~~~~~k~r~~~~--~~~~~~~~~~~~g~~vliVDDii~TG~T--~~~a~~~l~~  233 (309)
T PRK01259        159 NLVVVSPDVGGVVRARALAKRL-DADLAIIDKRRPRAN--VSEVMNIIGDVEGRDCILVDDMIDTAGT--LCKAAEALKE  233 (309)
T ss_pred             CcEEEEECCCcHHHHHHHHHHh-CCCEEEEEeecccce--eEEEEeecccCCCCEEEEEecccCcHHH--HHHHHHHHHc
Confidence            3455555666888999999999 898876665555555  432 345568999999999888766333  2355688899


Q ss_pred             CCCCeEEEEeecCCCccccccCCCCCcchHHHHHHHHhcCCCCCCCCCEEEEEeCCchhhhccccccccccccccHHHHH
Q 027833           94 LFVASFTLVLPFFPTGSFERMEEEGDVATAFTMARILSNIPTSRGGPTSLVIYDIHALQERFYFSDHVLPLFETGIPLLK  173 (218)
Q Consensus        94 ~ga~~ItlViPYl~YsRQDR~~~~Ge~vsak~va~lL~~~~~~~~G~d~vitvDlHs~~~~~~F~~~~~~l~~~~~~~l~  173 (218)
                      .|+++|.++..+-             .++....-++ .     ..+++++++-|-+..........++.-+  +..++++
T Consensus       234 ~Ga~~v~~~~tH~-------------i~~~~a~~~l-~-----~~~~~~iv~t~ti~~~~~~~~~~k~~~i--sva~~ia  292 (309)
T PRK01259        234 RGAKSVYAYATHP-------------VLSGGAIERI-E-----NSVIDELVVTDSIPLSEEAKKCDKIRVL--SVAPLLA  292 (309)
T ss_pred             cCCCEEEEEEEee-------------eCChHHHHHH-h-----cCCCCEEEEecCcccchhhccCCCeEEE--EcHHHHH
Confidence            9999998887421             1222333334 4     4789999999987432221111244456  7789999


Q ss_pred             HHHhhC
Q 027833          174 QRLHQL  179 (218)
Q Consensus       174 ~~l~~~  179 (218)
                      +.|+..
T Consensus       293 ~~i~~~  298 (309)
T PRK01259        293 EAIRRI  298 (309)
T ss_pred             HHHHHH
Confidence            999763

>PTZ00145 phosphoribosylpyrophosphate synthetase; Provisional

Probab=96.88  E-value=0.035  Score=52.94  Aligned_cols=136  Identities=10%  Similarity=0.031  Sum_probs=92.4

Q ss_pred             EEEEecCCcHHHHHHHHHHcCC------CceeeeeEeecCCCCCeeE-EEecCCCCCCeEEEEEecCCc-hhHHHHHHHH
Q 027833           17 VHLFYCVECEELARKVAAQSDL------ITLQSINWRNFADGWPNLY-INSAHDIRGQHVAFLASFSSP-GVIFEQISVI   88 (218)
Q Consensus        17 ~~i~~g~~~~~La~~Ia~~l~~------~~~~~~~~~~FpDG~~E~~-v~i~~~vrG~dV~Iiqs~~~p-d~lmELlll~   88 (218)
                      ++|=+-.++..-|+.+++.| +      .++.-+.=.+..++  |.. ..+..++.|++|+||..+.+. ..+   .-.+
T Consensus       282 VVVsPD~Ga~~RAr~~A~~L-~~~~~~~~~~avl~K~R~~~~--~v~~~~lvgdV~Gk~vIIVDDIIdTG~Tl---~~aa  355 (439)
T PTZ00145        282 VIVSPDAGGVYRARKFQDGL-NHRGISDCGIAMLIKQRTKPN--EIEKMDLVGNVYDSDVIIVDDMIDTSGTL---CEAA  355 (439)
T ss_pred             EEEccCcchHHHHHHHHHHh-ccccccCCCEEEEEeecCCCC--ceEEEeccCCCCCCEEEEEcceeCcHHHH---HHHH
Confidence            44433334567889999999 5      45655555666666  543 345679999999999888766 443   4467


Q ss_pred             HhcccCCCCeEEEEeecCCCccccccCCCCCcchHHHHHHHHhcCCCCCCCCCEEEEEeCCchhhhcccccccccccccc
Q 027833           89 YALPRLFVASFTLVLPFFPTGSFERMEEEGDVATAFTMARILSNIPTSRGGPTSLVIYDIHALQERFYFSDHVLPLFETG  168 (218)
Q Consensus        89 ~alr~~ga~~ItlViPYl~YsRQDR~~~~Ge~vsak~va~lL~~~~~~~~G~d~vitvDlHs~~~~~~F~~~~~~l~~~~  168 (218)
                      .+|++.||++|.++.-.-             .++...+.++.+      +|+++|++=|-+..........++..+  +.
T Consensus       356 ~~Lk~~GA~~V~~~~THg-------------lfs~~A~~rl~~------s~i~~IvvTdTIp~~~~~~~~~k~~vi--sV  414 (439)
T PTZ00145        356 KQLKKHGARRVFAFATHG-------------LFSGPAIERIEA------SPLEEVVVTDTVKSNKNIDSCKKITKL--SV  414 (439)
T ss_pred             HHHHHcCCCEEEEEEEcc-------------cCChhHHHHHhc------CCCCEEEEeCCCcCchhhcccCCeEEE--Eh
Confidence            788999999999976542             455555666654      799999999986322111112345556  77


Q ss_pred             HHHHHHHHhhC
Q 027833          169 IPLLKQRLHQL  179 (218)
Q Consensus       169 ~~~l~~~l~~~  179 (218)
                      .++|++.|+..
T Consensus       415 A~llAeaI~~i  425 (439)
T PTZ00145        415 SVLVADAIRRI  425 (439)
T ss_pred             HHHHHHHHHHH
Confidence            89999999763

>PRK00553 ribose-phosphate pyrophosphokinase; Provisional

Probab=96.80  E-value=0.049  Score=50.04  Aligned_cols=142  Identities=11%  Similarity=0.042  Sum_probs=94.1

Q ss_pred             CcEEEE-ecCCcHHHHHHHHHHcCCCceeeeeEeecCCCCCeeEEEecCCCCCCeEEEEEecCCc-hhHHHHHHHHHhcc
Q 027833           15 KQVHLF-YCVECEELARKVAAQSDLITLQSINWRNFADGWPNLYINSAHDIRGQHVAFLASFSSP-GVIFEQISVIYALP   92 (218)
Q Consensus        15 ~~~~i~-~g~~~~~La~~Ia~~l~~~~~~~~~~~~FpDG~~E~~v~i~~~vrG~dV~Iiqs~~~p-d~lmELlll~~alr   92 (218)
                      .++.|+ +-.+....|+.+|+.| +.++.-++-.+...++.+ ...+..++.|++|+||..+.+. ..   +...+..|+
T Consensus       168 ~~~vvVsPD~gg~~rA~~lA~~l-g~~~~vi~K~r~~~~~~~-~~~~~gdv~Gk~VIIVDDIi~TG~T---l~~aa~~Lk  242 (332)
T PRK00553        168 KDLVVVSPDYGGVKRARLIAESL-ELPLAIIDKRRPKHNVAE-SINVLGEVKNKNCLIVDDMIDTGGT---VIAAAKLLK  242 (332)
T ss_pred             CCeEEEEECCCcHHHHHHHHHHh-CCCEEEEEEecCCcceEe-eEEeeccCCCCEEEEEeccccchHH---HHHHHHHHH
Confidence            344444 4445668999999999 898877666665555222 2334568999999999888766 44   344557889


Q ss_pred             cCCCCeEEEEeecCCCccccccCCCCCcchHHHHHHHHhcCCCCCCCCCEEEEEeCCchhhhccccccccccccccHHHH
Q 027833           93 RLFVASFTLVLPFFPTGSFERMEEEGDVATAFTMARILSNIPTSRGGPTSLVIYDIHALQERFYFSDHVLPLFETGIPLL  172 (218)
Q Consensus        93 ~~ga~~ItlViPYl~YsRQDR~~~~Ge~vsak~va~lL~~~~~~~~G~d~vitvDlHs~~~~~~F~~~~~~l~~~~~~~l  172 (218)
                      +.||++|.++.-.-             .++....-++.+++-  ..|+++|++=|-+.... .....++..+  +..+++
T Consensus       243 ~~GA~~V~~~atHg-------------lf~~~a~~~l~~~~~--~~~i~~iv~Tntip~~~-~~~~~~~~~v--sva~~l  304 (332)
T PRK00553        243 KQKAKKVCVMATHG-------------LFNKNAIQLFDEAFK--KKLIDKLFVSNSIPQTK-FEKKPQFKVV--DLAHLY  304 (332)
T ss_pred             HcCCcEEEEEEEee-------------ecCchHHHHHHhccc--cCCCCEEEEeCCccCcc-cccCCCeEEE--EhHHHH
Confidence            99999999877542             344455555543000  35899999999974221 1111345566  778999


Q ss_pred             HHHHhhC
Q 027833          173 KQRLHQL  179 (218)
Q Consensus       173 ~~~l~~~  179 (218)
                      ++.|...
T Consensus       305 a~~i~~~  311 (332)
T PRK00553        305 EEVLLCY  311 (332)
T ss_pred             HHHHHHH
Confidence            9998764

>PRK02812 ribose-phosphate pyrophosphokinase; Provisional

Probab=96.76  E-value=0.067  Score=49.15  Aligned_cols=137  Identities=16%  Similarity=0.125  Sum_probs=90.8

Q ss_pred             cEEEEecCCcHHHHHHHHHHcCCCceeeeeEeecCCCCCeeEEEecCCCCCCeEEEEEecCCchhHHHHHHHHHhcccCC
Q 027833           16 QVHLFYCVECEELARKVAAQSDLITLQSINWRNFADGWPNLYINSAHDIRGQHVAFLASFSSPGVIFEQISVIYALPRLF   95 (218)
Q Consensus        16 ~~~i~~g~~~~~La~~Ia~~l~~~~~~~~~~~~FpDG~~E~~v~i~~~vrG~dV~Iiqs~~~pd~lmELlll~~alr~~g   95 (218)
                      .+++-.-.+...+|+.+|+.|++.+.....-++-.++. .....+..++.|++|+|+..+.+.-.-  +.-.+.+|++.|
T Consensus       181 ~vvVsPD~gg~~ra~~~A~~L~~~~~~~~~k~R~~~~~-~~~~~~~~~v~g~~viiVDDii~TG~T--~~~a~~~L~~~G  257 (330)
T PRK02812        181 IVVVSPDVGGVARARAFAKKLNDAPLAIIDKRRQAHNV-AEVLNVIGDVKGKTAILVDDMIDTGGT--ICEGARLLRKEG  257 (330)
T ss_pred             eEEEEECCccHHHHHHHHHHhCCCCEEEEEeeccCCce-eeeEeccccCCCCEEEEEccccCcHHH--HHHHHHHHhccC
Confidence            34444455567889999999933677666555544431 123445568999999999887666222  335568899999


Q ss_pred             CCeEEEEe--ecCCCccccccCCCCCcchHHHHHHHHhcCCCCCCCCCEEEEEeCCchhhhccccccccccccccHHHHH
Q 027833           96 VASFTLVL--PFFPTGSFERMEEEGDVATAFTMARILSNIPTSRGGPTSLVIYDIHALQERFYFSDHVLPLFETGIPLLK  173 (218)
Q Consensus        96 a~~ItlVi--PYl~YsRQDR~~~~Ge~vsak~va~lL~~~~~~~~G~d~vitvDlHs~~~~~~F~~~~~~l~~~~~~~l~  173 (218)
                      +++|.++.  |-|               +...+-++.+      .++|+|++.|-+......-|+ ++..+  +..++|+
T Consensus       258 a~~v~~~~tH~v~---------------s~~a~~~l~~------~~id~iv~tnti~~~~~~~~~-~~~~~--~va~lla  313 (330)
T PRK02812        258 AKQVYACATHAVF---------------SPPAIERLSS------GLFEEVIVTNTIPVPEERRFP-QLKVL--SVANMLG  313 (330)
T ss_pred             CCeEEEEEEcccC---------------ChHHHHHHhh------CCCCEEEEeCCCCChhhcccC-CceEE--EHHHHHH
Confidence            99999988  543               3334444443      689999999998532111132 45556  7789999


Q ss_pred             HHHhhC
Q 027833          174 QRLHQL  179 (218)
Q Consensus       174 ~~l~~~  179 (218)
                      +.|+..
T Consensus       314 ~~i~~~  319 (330)
T PRK02812        314 EAIWRI  319 (330)
T ss_pred             HHHHHH
Confidence            998764

>PRK06827 phosphoribosylpyrophosphate synthetase; Provisional

Probab=96.70  E-value=0.069  Score=50.08  Aligned_cols=141  Identities=11%  Similarity=0.010  Sum_probs=90.9

Q ss_pred             CcEEEEecCCcHHHHHHHHHHcCCCceeeeeEeecCCCC-----CeeEEEec-CCCCCCeEEEEEecCCc-hhHHHHHHH
Q 027833           15 KQVHLFYCVECEELARKVAAQSDLITLQSINWRNFADGW-----PNLYINSA-HDIRGQHVAFLASFSSP-GVIFEQISV   87 (218)
Q Consensus        15 ~~~~i~~g~~~~~La~~Ia~~l~~~~~~~~~~~~FpDG~-----~E~~v~i~-~~vrG~dV~Iiqs~~~p-d~lmELlll   87 (218)
                      ..+++-+-.++...|+.+|..| +.++.-..-.+..+++     .+.+..+. .++.|++|+|+..+.+. ..   +...
T Consensus       208 ~~VVVsPD~Gg~~rA~~~A~~L-g~~~ai~~K~R~~~~~~~g~~~~~~~~~~g~dV~gr~vIIVDDII~TG~T---l~~a  283 (382)
T PRK06827        208 HLMVISPDTGAMDRAKYYASVL-GVDLGLFYKRRDYSRVVNGRNPIVAHEFLGRDVEGKDVLIVDDMIASGGS---MIDA  283 (382)
T ss_pred             CcEEEEECccchHHHHHHHHHh-CCCEEEEEcccCCcccccCCCceEEEecCCcccCCCEEEEEeCCcCcHHH---HHHH
Confidence            3455555566778999999999 8888755544433220     01334443 48999999999888766 33   4556


Q ss_pred             HHhcccCCCCeEEEEeecCCCccccccCCCCCcchHHHHHHHHhcCCCCCCCCCEEEEEeCCc--hhhhccccccccccc
Q 027833           88 IYALPRLFVASFTLVLPFFPTGSFERMEEEGDVATAFTMARILSNIPTSRGGPTSLVIYDIHA--LQERFYFSDHVLPLF  165 (218)
Q Consensus        88 ~~alr~~ga~~ItlViPYl~YsRQDR~~~~Ge~vsak~va~lL~~~~~~~~G~d~vitvDlHs--~~~~~~F~~~~~~l~  165 (218)
                      +..|++.||++|.++...--+             + ..+-++.++++  ..++++|++=|-+-  .....  ...+..+ 
T Consensus       284 a~~Lk~~GA~~V~~~~tH~vf-------------~-~a~~~l~~~~~--~g~i~~iv~TdTi~~~~~~~~--~~~~~~i-  344 (382)
T PRK06827        284 AKELKSRGAKKIIVAATFGFF-------------T-NGLEKFDKAYE--EGYFDRIIGTNLVYHPEELLS--KPWYIEV-  344 (382)
T ss_pred             HHHHHHcCCCEEEEEEEeecC-------------h-HHHHHHHhhcc--cCCCCEEEEeCCCcCchhhcc--cCCeEEE-
Confidence            788889999999887765322             2 33444444222  34699999999652  22211  1234456 


Q ss_pred             cccHHHHHHHHhhC
Q 027833          166 ETGIPLLKQRLHQL  179 (218)
Q Consensus       166 ~~~~~~l~~~l~~~  179 (218)
                       +..+++++.|...
T Consensus       345 -sva~llA~~I~~~  357 (382)
T PRK06827        345 -DMSKLIARIIDAL  357 (382)
T ss_pred             -EcHHHHHHHHHHH
Confidence             7789999998764

>PRK15423 hypoxanthine phosphoribosyltransferase; Provisional

Probab=95.57  E-value=0.26  Score=41.31  Aligned_cols=87  Identities=14%  Similarity=0.158  Sum_probs=61.6

Q ss_pred             CCcEEEEecCCcHHHHHHHHHHcCCCc--eeeeeEeecCCCCC---eeEEEe--cCCCCCCeEEEEEecCCchhHHHHHH
Q 027833           14 KKQVHLFYCVECEELARKVAAQSDLIT--LQSINWRNFADGWP---NLYINS--AHDIRGQHVAFLASFSSPGVIFEQIS   86 (218)
Q Consensus        14 ~~~~~i~~g~~~~~La~~Ia~~l~~~~--~~~~~~~~FpDG~~---E~~v~i--~~~vrG~dV~Iiqs~~~pd~lmELll   86 (218)
                      +..++|=-.+++-.+|..+++.| +.+  +..+...+|-||..   +..+..  +.+++|++|+||..+.+.-.-|.  .
T Consensus        34 ~~~vvvgI~~Gg~~fa~~L~~~L-~~~~~v~~l~~ssY~~~~~~~~~v~i~~~~~~~v~gk~VLlVDDIiDTG~TL~--~  110 (178)
T PRK15423         34 SDMVLVGLLRGSFMFMADLCREV-QVSHEVDFMTASSYGSGMSTTRDVKILKDLDEDIRGKDVLIVEDIIDSGNTLS--K  110 (178)
T ss_pred             CCeEEEEEecCChHHHHHHHHHh-CCCcceeEEEEEEecCCCcccCceEEecCCCCCCCCCEEEEEeeecCchHHHH--H
Confidence            34566666788889999999999 776  55788888864310   555543  45899999999999877744444  4


Q ss_pred             HHHhcccCCCCeEEEEe
Q 027833           87 VIYALPRLFVASFTLVL  103 (218)
Q Consensus        87 l~~alr~~ga~~ItlVi  103 (218)
                      +.+.++..|++++.+..
T Consensus       111 l~~~l~~~~~~~v~~av  127 (178)
T PRK15423        111 VREILSLREPKSLAICT  127 (178)
T ss_pred             HHHHHHhCCCCEEEEEE
Confidence            44556778888884443

>PRK09162 hypoxanthine-guanine phosphoribosyltransferase; Provisional

Probab=95.27  E-value=0.25  Score=41.29  Aligned_cols=86  Identities=8%  Similarity=0.061  Sum_probs=58.3

Q ss_pred             CcEEEEecCCcHHHHHHHHHHcCCCce--eeeeEeecCCCCC--eeEEEe--cCCCCCCeEEEEEecCCchhHHHHHHHH
Q 027833           15 KQVHLFYCVECEELARKVAAQSDLITL--QSINWRNFADGWP--NLYINS--AHDIRGQHVAFLASFSSPGVIFEQISVI   88 (218)
Q Consensus        15 ~~~~i~~g~~~~~La~~Ia~~l~~~~~--~~~~~~~FpDG~~--E~~v~i--~~~vrG~dV~Iiqs~~~pd~lmELlll~   88 (218)
                      ..++|-..+++..+|..+|+.| ++++  ..+...++.++..  +....+  ..+++|++|+||..+.+.-..++  -.+
T Consensus        41 ~~viV~i~~gg~~~A~~La~~l-~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~gk~VLIVDDIidTG~Tl~--~~~  117 (181)
T PRK09162         41 NPLVLCVMGGGLVFTGQLLPRL-DFPLEFDYLHATRYRNETTGGELVWKVKPRESLKGRTVLVVDDILDEGHTLA--AIR  117 (181)
T ss_pred             CeEEEEECCCcHHHHHHHHHHc-CCCcccCEEEEEecCCCccCCceeEecCCCCCCCCCEEEEEccccCcHHHHH--HHH
Confidence            3455656677889999999999 8774  3555566665411  222222  35789999999988876633333  345


Q ss_pred             HhcccCCCCeEEEEe
Q 027833           89 YALPRLFVASFTLVL  103 (218)
Q Consensus        89 ~alr~~ga~~ItlVi  103 (218)
                      ..|++.||++|.+..
T Consensus       118 ~~Lk~~Ga~~V~~av  132 (181)
T PRK09162        118 DRCLEMGAAEVYSAV  132 (181)
T ss_pred             HHHHhCCCCEEEEEE
Confidence            567789999997765

>PLN02501 digalactosyldiacylglycerol synthase

Probab=94.48  E-value=0.7  Score=46.93  Aligned_cols=164  Identities=16%  Similarity=0.121  Sum_probs=95.5

Q ss_pred             EEecCCcHHHHHHHHHHcC--CCceeeeeEeecCCCCCeeEEEecCCCCCCeEEEEEecCCc----hhHHHHHHHHHhcc
Q 027833           19 LFYCVECEELARKVAAQSD--LITLQSINWRNFADGWPNLYINSAHDIRGQHVAFLASFSSP----GVIFEQISVIYALP   92 (218)
Q Consensus        19 i~~g~~~~~La~~Ia~~l~--~~~~~~~~~~~FpDG~~E~~v~i~~~vrG~dV~Iiqs~~~p----d~lmELlll~~alr   92 (218)
                      +-..++..+|--+||..++  |.....=-|..+.++      .+.  -.+++|.|+-+-.-|    .++.-|+..++-++
T Consensus       281 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~--~~~r~~~ivTtAslPWmTGtavnpL~rAayLa~  352 (794)
T PLN02501        281 LESDNHNDELDLRIASVLQSTGHCYDGGFWTDSSKH------ELS--DGKRHVAIVTTASLPWMTGTAVNPLFRAAYLAK  352 (794)
T ss_pred             cccccccccchhhhhhhhhccCccccCCcccCcccc------ccc--cCCCeEEEEEcccCcccccccccHHHHHHHhcc
Confidence            3344555577778887772  111211122222222      222  225789999665556    78888888888776


Q ss_pred             cCCCCeEEEEeecCCCccccccCCCCCcch-----HHHHHHHH-hcCCCCCCCCCEEEEEeCCchhhhcc---ccccccc
Q 027833           93 RLFVASFTLVLPFFPTGSFERMEEEGDVAT-----AFTMARIL-SNIPTSRGGPTSLVIYDIHALQERFY---FSDHVLP  163 (218)
Q Consensus        93 ~~ga~~ItlViPYl~YsRQDR~~~~Ge~vs-----ak~va~lL-~~~~~~~~G~d~vitvDlHs~~~~~~---F~~~~~~  163 (218)
                      . |-.+||+|+|||+-+-|....-.+-.++     -..+-+.| +     .+|+..       ...+..|   |.....-
T Consensus       353 ~-~~~~VtlviPWl~~~dq~~vy~~~~~F~~p~eQe~~ir~wl~~-----r~g~~~-------~~~i~fYpg~~~~~~~S  419 (794)
T PLN02501        353 S-AKQNVTLLVPWLCKSDQELVYPNNLTFSSPEEQESYIRNWLEE-----RIGFKA-------DFKISFYPGKFSKERRS  419 (794)
T ss_pred             c-CCceEEEEEecCCccccccccCCCcccCCHHHHHHHHHHHHHH-----hcCCCC-------CceEEeecchhccCCcc
Confidence            5 5689999999999765544432121222     34555677 4     677662       3333222   3333334


Q ss_pred             cccccHHHHHHHHhhCCCCCCEEEEeCCc-ccHHHHHHHHHHcC
Q 027833          164 LFETGIPLLKQRLHQLPDANNLLHFRMME-PGSDSTRCWIISLR  206 (218)
Q Consensus       164 l~~~~~~~l~~~l~~~~~~~~~vvvsPD~-Ga~~ra~~~a~~l~  206 (218)
                      +  -+..-+.+++... +.+-..+..|.. |...-+..||..++
T Consensus       420 I--~p~gdI~~~L~~f-~PDVVHLatP~~LGw~~~Glr~ArKl~  460 (794)
T PLN02501        420 I--IPAGDTSQFIPSK-DADIAILEEPEHLNWYHHGKRWTDKFN  460 (794)
T ss_pred             c--cchHHHHHHhhcc-CCCEEEECCchhhccHHHHHHHHHHcC
Confidence            4  4556678888763 445555677874 44434899999998

>TIGR01203 HGPRTase hypoxanthine phosphoribosyltransferase

Probab=94.31  E-value=1.1  Score=36.80  Aligned_cols=85  Identities=11%  Similarity=0.077  Sum_probs=57.4

Q ss_pred             CcEEEEecCCcHHHHHHHHHHcCCCc--eeeeeEeecCCCCC---eeE--EEecCCCCCCeEEEEEecCCc-hhHHHHHH
Q 027833           15 KQVHLFYCVECEELARKVAAQSDLIT--LQSINWRNFADGWP---NLY--INSAHDIRGQHVAFLASFSSP-GVIFEQIS   86 (218)
Q Consensus        15 ~~~~i~~g~~~~~La~~Ia~~l~~~~--~~~~~~~~FpDG~~---E~~--v~i~~~vrG~dV~Iiqs~~~p-d~lmELll   86 (218)
                      ..+++=...++..+|..+++.| +.+  +..+..+.|-|+.+   +..  ..+..++.|++|+|+..+.+. ..+.+.. 
T Consensus        27 ~~vvv~i~~GG~~~a~~l~~~L-~~~~~v~~i~~~~Y~~~~~~~~~~~~~~~~~~~~~gk~vlivDDii~TG~Tl~~~~-  104 (166)
T TIGR01203        27 PLVLLCVLKGSFPFFADLIRYI-AVPVQVDFMAVSSYGNGMQSSGDVKILKDLDLSIKGKDVLIVEDIVDTGLTLQYLL-  104 (166)
T ss_pred             CeEEEEEccCCHHHHHHHHHhc-CCCceeeEEEEeeccCCCcccCceEEecCCCCCCCCCEEEEEeeeeCcHHHHHHHH-
Confidence            3455555677889999999999 764  55667776654311   222  234568999999999888766 4444443 


Q ss_pred             HHHhcccCCCCeEEEEe
Q 027833           87 VIYALPRLFVASFTLVL  103 (218)
Q Consensus        87 l~~alr~~ga~~ItlVi  103 (218)
                        ++|+..|+++|.++.
T Consensus       105 --~~l~~~g~~~i~~~~  119 (166)
T TIGR01203       105 --DLLKARKPKSLKIVT  119 (166)
T ss_pred             --HHHHHCCCCEEEEEE
Confidence              455677888886655

Sequence differences as small as a single residue can affect whether members of this family act on hypoxanthine and guanine or hypoxanthine only. The designation of this model as equivalog reflects hypoxanthine specificity and does not reflect whether or not guanine can replace hypoxanthine.

>PLN02238 hypoxanthine phosphoribosyltransferase

Probab=94.28  E-value=1  Score=38.02  Aligned_cols=95  Identities=15%  Similarity=0.137  Sum_probs=61.9

Q ss_pred             HHHhhhhhcC-CCcEEEEecCCcHHHHHHHHHHcCCC---ce--eeeeEeecCCCC---CeeEEEe---cCCCCCCeEEE
Q 027833            4 KREIKAKKSQ-KKQVHLFYCVECEELARKVAAQSDLI---TL--QSINWRNFADGW---PNLYINS---AHDIRGQHVAF   71 (218)
Q Consensus         4 ~~~~~~~~~~-~~~~~i~~g~~~~~La~~Ia~~l~~~---~~--~~~~~~~FpDG~---~E~~v~i---~~~vrG~dV~I   71 (218)
                      ++++... .. +..++|=-.+++-.+|..+++.| +.   ++  ..+..+++.+|.   .+..+..   ..+++|++|+|
T Consensus        25 A~~I~~~-~~~~~~vivgi~~Gg~~fa~~L~~~L-~~~~~~~~i~fi~~~sy~~~~~~~g~~~i~~~~~~~~v~gk~Vli  102 (189)
T PLN02238         25 AAQIASD-YAGKSPVVLGVATGAFMFLADLVRAI-QPLPRGLTVDFIRASSYGGGTESSGVAKVSGADLKIDVKGKHVLL  102 (189)
T ss_pred             HHHHHHH-cCCCCcEEEEEccCCHHHHHHHHHHh-CccCCCeEEEEEEeeecCCCccccCceeEecCCCCCCCCCCEEEE
Confidence            3444443 33 33555555667778999999999 76   43  456677775531   1455543   35799999999


Q ss_pred             EEecCCc-hhHHHHHHHHHhcccCCCCeEEEEe
Q 027833           72 LASFSSP-GVIFEQISVIYALPRLFVASFTLVL  103 (218)
Q Consensus        72 iqs~~~p-d~lmELlll~~alr~~ga~~ItlVi  103 (218)
                      |-.+.+. ..+.+   +++.++..|+++|.+..
T Consensus       103 VDDIidTG~Tl~~---~~~~l~~~g~~~v~~av  132 (189)
T PLN02238        103 VEDIVDTGNTLSA---LVAHLEAKGAASVSVCA  132 (189)
T ss_pred             EecccchHHHHHH---HHHHHHhCCCCEEEEEE
Confidence            9887765 33333   34667788999986664

>PLN02297 ribose-phosphate pyrophosphokinase

Probab=94.27  E-value=2  Score=39.56  Aligned_cols=127  Identities=13%  Similarity=0.039  Sum_probs=77.2

Q ss_pred             HHHHHHHcCCCceeeeeEeecCCCCCeeEEEecCCCCCCeEEEEEecCCchhHHHHHHHHHhcccCCCCeEEEEeecCCC
Q 027833           29 ARKVAAQSDLITLQSINWRNFADGWPNLYINSAHDIRGQHVAFLASFSSPGVIFEQISVIYALPRLFVASFTLVLPFFPT  108 (218)
Q Consensus        29 a~~Ia~~l~~~~~~~~~~~~FpDG~~E~~v~i~~~vrG~dV~Iiqs~~~pd~lmELlll~~alr~~ga~~ItlViPYl~Y  108 (218)
                      .++.++.+.+.++.-.+=.+  +|+.+.......+++|++|+|+..+.+.-.-  +...++.|++.|+++|.++.-.-  
T Consensus       195 ~~ra~~~a~~~~~~~~~K~R--~g~~~~~~~~~~dv~gr~vlIVDDIidTG~T--l~~aa~~L~~~Ga~~V~~~~THg--  268 (326)
T PLN02297        195 WKRFHKQFEHFPMVVCTKVR--EGDKRIVRIKEGNPAGRHVVIVDDLVQSGGT--LIECQKVLAAHGAAKVSAYVTHG--  268 (326)
T ss_pred             HHHHHHHcCCCCEEEEEeEE--CCCceEEEecccccCCCeEEEEecccCcHHH--HHHHHHHHHHCCCcEEEEEEECc--
Confidence            33444333256665444333  4522444445678999999999888766222  34456888899999999887652  


Q ss_pred             ccccccCCCCCcchHHHHHHHHhc--CCCCCCCCCEEEEEeCCchhhh--ccccccccccccccHHHHHHHHh
Q 027833          109 GSFERMEEEGDVATAFTMARILSN--IPTSRGGPTSLVIYDIHALQER--FYFSDHVLPLFETGIPLLKQRLH  177 (218)
Q Consensus       109 sRQDR~~~~Ge~vsak~va~lL~~--~~~~~~G~d~vitvDlHs~~~~--~~F~~~~~~l~~~~~~~l~~~l~  177 (218)
                                 .++...+-++.++  .|  .+|+++|++=|-+.....  .-. .++..+  +..+++++.|.
T Consensus       269 -----------lfs~~a~~~l~~~~~~~--~~~i~~iv~TdTip~~~~~~~~~-~k~~~i--sva~llAe~i~  325 (326)
T PLN02297        269 -----------VFPNESWERFTHDNGGP--EAGFAYFWITDSCPQTVKAVRGK-APFEVL--SLAGSIADALQ  325 (326)
T ss_pred             -----------ccChhHHHHHHhccccc--ccCcCEEEEcCCccCChhhcccC-CCcEEE--EcHHHHHHHhc
Confidence                       3444556666651  11  269999999998732110  011 234445  66888888763

>COG0634 Hpt Hypoxanthine-guanine phosphoribosyltransferase [Nucleotide transport and metabolism]

Probab=93.22  E-value=1.6  Score=36.85  Aligned_cols=82  Identities=10%  Similarity=0.111  Sum_probs=56.0

Q ss_pred             cCCCcEEEE-ecCCcHHHHHHHHHHcCCCc--eeeeeEeecC-----CCCCeeEEEe--cCCCCCCeEEEEEecCCc---
Q 027833           12 SQKKQVHLF-YCVECEELARKVAAQSDLIT--LQSINWRNFA-----DGWPNLYINS--AHDIRGQHVAFLASFSSP---   78 (218)
Q Consensus        12 ~~~~~~~i~-~g~~~~~La~~Ia~~l~~~~--~~~~~~~~Fp-----DG~~E~~v~i--~~~vrG~dV~Iiqs~~~p---   78 (218)
                      ++.++++++ -..++-.|+..+.+++ +++  +..+...+|-     .|  +.++.-  .++++|+||+||-.+-+.   
T Consensus        32 y~g~~~~vv~iLkGs~~F~~dL~r~i-~~~~e~dFm~vSSYg~~t~ssg--~v~i~kDld~di~grdVLiVeDIiDsG~T  108 (178)
T COG0634          32 YGGKDPLVVGVLKGSFPFMADLIRAI-DFPLEVDFMHVSSYGGGTSSSG--EVKILKDLDEDIKGRDVLIVEDIIDSGLT  108 (178)
T ss_pred             hCCCceEEEEEcccchhhHHHHHHhc-CCCceeEEEEEeccCCCcccCC--ceEEecccccCCCCCeEEEEecccccChh
Confidence            554554444 4677888999999998 655  4566777774     45  555554  589999999999887554   


Q ss_pred             -hhHHHHHHHHHhcccCCCCeEEEE
Q 027833           79 -GVIFEQISVIYALPRLFVASFTLV  102 (218)
Q Consensus        79 -d~lmELlll~~alr~~ga~~ItlV  102 (218)
                       ..+.++|      +..||+++.++
T Consensus       109 Ls~i~~~l------~~r~a~sv~i~  127 (178)
T COG0634         109 LSKVRDLL------KERGAKSVRIA  127 (178)
T ss_pred             HHHHHHHH------HhCCCCeEEEE
Confidence             3444444      46788887654

>PF14572 Pribosyl_synth: Phosphoribosyl synthetase-associated domain; PDB: 2H07_B 2H06_B 3S5J_B 2HCR_A 3EFH_A 2H08_A 1DKR_B 1DKU_B 1IBS_B 2JI4_A

Probab=92.02  E-value=0.59  Score=39.74  Aligned_cols=97  Identities=13%  Similarity=0.109  Sum_probs=62.1

Q ss_pred             EEecCCCCCCeEEEEEecCCc-hhHHHHHHHHHhcccCCCCeEEEEeecCCCccccccCCCCCcchHHHHHHHHhcCCCC
Q 027833           58 INSAHDIRGQHVAFLASFSSP-GVIFEQISVIYALPRLFVASFTLVLPFFPTGSFERMEEEGDVATAFTMARILSNIPTS  136 (218)
Q Consensus        58 v~i~~~vrG~dV~Iiqs~~~p-d~lmELlll~~alr~~ga~~ItlViPYl~YsRQDR~~~~Ge~vsak~va~lL~~~~~~  136 (218)
                      +.+-.+|.|++++|+..+.+. ..+   ...++.||+.||++|.++...-=.+             .... +.|+     
T Consensus        75 ~~vVGDV~gk~~IIvDDiIdtg~Tl---~~aA~~Lk~~GA~~V~~~aTHgvfs-------------~~A~-~~l~-----  132 (184)
T PF14572_consen   75 MNVVGDVKGKICIIVDDIIDTGGTL---IKAAELLKERGAKKVYACATHGVFS-------------GDAP-ERLE-----  132 (184)
T ss_dssp             EEEES--TTSEEEEEEEEESSTHHH---HHHHHHHHHTTESEEEEEEEEE----------------TTHH-HHHH-----
T ss_pred             eEEEEEccCCeEeeecccccchHHH---HHHHHHHHHcCCCEEEEEEeCcccC-------------chHH-HHHh-----
Confidence            345579999999999888655 444   4567788999999999988764332             2232 4455     


Q ss_pred             CCCCCEEEEEeCCchhhhccccccccccccccHHHHHHHHhh
Q 027833          137 RGGPTSLVIYDIHALQERFYFSDHVLPLFETGIPLLKQRLHQ  178 (218)
Q Consensus       137 ~~G~d~vitvDlHs~~~~~~F~~~~~~l~~~~~~~l~~~l~~  178 (218)
                      ...+++|++=|-.-...+..-...+.-+  +..++|++.|+.
T Consensus       133 ~s~Id~vvvTnTIp~~~~~~~~~Ki~vl--dis~llaeaI~r  172 (184)
T PF14572_consen  133 ESPIDEVVVTNTIPQEEQKLQCPKIKVL--DISPLLAEAIRR  172 (184)
T ss_dssp             HSSESEEEEETTS--HHHHHH-TTEEEE----HHHHHHHHHH
T ss_pred             hcCCeEEEEeccccCchhhhcCCCEeEe--ehHHHHHHHHHH
Confidence            4679999999976443322222355666  778999999865

...

>PTZ00149 hypoxanthine phosphoribosyltransferase; Provisional

Probab=91.87  E-value=2.7  Score=37.08  Aligned_cols=94  Identities=11%  Similarity=0.105  Sum_probs=60.1

Q ss_pred             HHHhhhhhcCCCcEEEEecCCcHHHHHHHHHHcCC-----------Cce---eeeeEeecCC----CCCeeEEEe--cCC
Q 027833            4 KREIKAKKSQKKQVHLFYCVECEELARKVAAQSDL-----------ITL---QSINWRNFAD----GWPNLYINS--AHD   63 (218)
Q Consensus         4 ~~~~~~~~~~~~~~~i~~g~~~~~La~~Ia~~l~~-----------~~~---~~~~~~~FpD----G~~E~~v~i--~~~   63 (218)
                      ++++...-.++..++|--.+++-.|+..+.+.| +           .++   ..+..+.|-|    |  |+.+..  ..+
T Consensus        71 A~~I~~dy~~~~~vilgILkGg~~FaadL~~~L-~~~~~~~~~~~~~~~~~~dfi~vsSY~~~~s~g--~v~i~~~~~~~  147 (241)
T PTZ00149         71 AYDIKQVYGNEELHILCILKGSRGFFSALVDYL-NRIHNYSSTESPKPPYQEHYVRVKSYCNDESTG--KLEIVSDDLSC  147 (241)
T ss_pred             HHHHHHHcCCCCeEEEEECCCCHHHHHHHHHHH-hhhhhccccccCcccccccEEEEEEccCCCcCC--ceEEecccccc
Confidence            344544312334455555677778888888888 4           123   6677777755    5  565543  246


Q ss_pred             CCCCeEEEEEecCCc-hhHHHHHHHHHhcccCCCCeEEEEe
Q 027833           64 IRGQHVAFLASFSSP-GVIFEQISVIYALPRLFVASFTLVL  103 (218)
Q Consensus        64 vrG~dV~Iiqs~~~p-d~lmELlll~~alr~~ga~~ItlVi  103 (218)
                      +.|++|+||-.+.+. ..+.+++   +.|++.|+++|.+..
T Consensus       148 l~gk~VLIVDDIidTG~Tl~~~~---~~L~~~g~~~V~va~  185 (241)
T PTZ00149        148 LKDKHVLIVEDIIDTGNTLVKFC---EYLKKFEPKTIRIAT  185 (241)
T ss_pred             cCCCEEEEEEeEeChHHHHHHHH---HHHHhcCCCEEEEEE
Confidence            899999999888766 3333333   556778999986654

>PRK00129 upp uracil phosphoribosyltransferase; Reviewed

Probab=91.83  E-value=1.6  Score=37.24  Aligned_cols=86  Identities=13%  Similarity=0.066  Sum_probs=59.3

Q ss_pred             cEEEEecCCcHHHHHHHHHHcCCCceeeeeEeecCC-CCC-eeEEEecCCCCCCeEEEEEecCCc-hhHHHHHHHHHhcc
Q 027833           16 QVHLFYCVECEELARKVAAQSDLITLQSINWRNFAD-GWP-NLYINSAHDIRGQHVAFLASFSSP-GVIFEQISVIYALP   92 (218)
Q Consensus        16 ~~~i~~g~~~~~La~~Ia~~l~~~~~~~~~~~~FpD-G~~-E~~v~i~~~vrG~dV~Iiqs~~~p-d~lmELlll~~alr   92 (218)
                      .+.|=-.+++..+++.+++.+...+++.+...+... +++ +.+.+++.++.|++|+|+..+-.. ..+.   ..++.|+
T Consensus        72 ~vvV~IlrgG~~~~~~l~~~l~~~~~~~i~~~r~~~t~~~~~~~~~lp~~i~~~~VllvDd~laTG~Tl~---~ai~~L~  148 (209)
T PRK00129         72 LVIVPILRAGLGMVDGVLKLIPSARVGHIGLYRDEETLEPVEYYVKLPEDIDERTVIVVDPMLATGGSAI---AAIDLLK  148 (209)
T ss_pred             EEEEEEeCCCHHHHHHHHHhCCcCeeeeEEEEeCCCCCCCEEEEeeCCCcCCCCEEEEECCcccchHHHH---HHHHHHH
Confidence            344445677889999999999336777776655422 211 247778889999999999877554 3333   3445566


Q ss_pred             cCCCCeEEEEee
Q 027833           93 RLFVASFTLVLP  104 (218)
Q Consensus        93 ~~ga~~ItlViP  104 (218)
                      +.|+++|.++.-
T Consensus       149 ~~G~~~I~~~~l  160 (209)
T PRK00129        149 KRGAKNIKVLCL  160 (209)
T ss_pred             HcCCCEEEEEEE
Confidence            778999987764

>PLN02440 amidophosphoribosyltransferase

Probab=91.33  E-value=2.3  Score=40.97  Aligned_cols=123  Identities=11%  Similarity=0.096  Sum_probs=78.1

Q ss_pred             CcEEEEecCCcHHHHHHHHHHcCCCceee-eeEeecC------------CCCCeeEEEec---CCCCCCeEEEEEecCCc
Q 027833           15 KQVHLFYCVECEELARKVAAQSDLITLQS-INWRNFA------------DGWPNLYINSA---HDIRGQHVAFLASFSSP   78 (218)
Q Consensus        15 ~~~~i~~g~~~~~La~~Ia~~l~~~~~~~-~~~~~Fp------------DG~~E~~v~i~---~~vrG~dV~Iiqs~~~p   78 (218)
                      ..++|---.++..+|..+++.+ ++++.. ....++.            ++  ....++.   ..++|++|+||......
T Consensus       276 ~d~vvpVP~s~~~~A~~la~~l-giP~~~~lvr~ry~~rt~i~~~q~~r~~--~~~~k~~~~~~~v~gk~VlLVDDiitt  352 (479)
T PLN02440        276 CDVVIPVPDSGRVAALGYAAKL-GVPFQQGLIRSHYVGRTFIEPSQKIRDF--SVKLKLNPVRSVLEGKRVVVVDDSIVR  352 (479)
T ss_pred             CCEEEEeCCcHHHHHHHHHHHh-CCCchhheEEEeeccccccCcchhhhhh--hheeeeecccccccCceEEEEeceeCc
Confidence            3455444455667899999999 888642 1113332            12  2333332   46899999999776555


Q ss_pred             hhHHHHHHHHHhcccCCCCeEEEEee--------cCCCccccccCCCCCcchHHHHHHHHhcCCCCCCCCCEEEEEeCCc
Q 027833           79 GVIFEQISVIYALPRLFVASFTLVLP--------FFPTGSFERMEEEGDVATAFTMARILSNIPTSRGGPTSLVIYDIHA  150 (218)
Q Consensus        79 d~lmELlll~~alr~~ga~~ItlViP--------Yl~YsRQDR~~~~Ge~vsak~va~lL~~~~~~~~G~d~vitvDlHs  150 (218)
                      -.-++  -+++.|+++||++|.+.+-        |++..-.||.+.-|--.+..-+++.|.        +|++..+.+..
T Consensus       353 GtTl~--~i~~~L~~aGa~~V~v~v~~p~~~~p~~~G~d~p~~~~li~~~~~~~ei~~~~~--------~dsl~~l~~~~  422 (479)
T PLN02440        353 GTTSS--KIVRMLREAGAKEVHMRIASPPIIASCYYGVDTPSREELISNRMSVEEIRKFIG--------CDSLAFLPLED  422 (479)
T ss_pred             HHHHH--HHHHHHHhcCCCEEEEEEECCcccccceeeccCCCHHHHhhcCCCHHHHHHHhC--------CCEEEEecHHH
Confidence            33332  2557788999999876643        344566666665566677777777774        78887776653

>TIGR01091 upp uracil phosphoribosyltransferase

Probab=89.38  E-value=3  Score=35.55  Aligned_cols=83  Identities=12%  Similarity=0.050  Sum_probs=58.0

Q ss_pred             EEecCCcHHHHHHHHHHcCCCceeeeeEeecC-CCCC-eeEEEecCCCCCCeEEEEEecCCc-hhHHHHHHHHHhcccCC
Q 027833           19 LFYCVECEELARKVAAQSDLITLQSINWRNFA-DGWP-NLYINSAHDIRGQHVAFLASFSSP-GVIFEQISVIYALPRLF   95 (218)
Q Consensus        19 i~~g~~~~~La~~Ia~~l~~~~~~~~~~~~Fp-DG~~-E~~v~i~~~vrG~dV~Iiqs~~~p-d~lmELlll~~alr~~g   95 (218)
                      +=-.+++..|++.+.+.+...+++.+...+.. .+++ +.+.++++++.|++|+|+..+-.. ..+   ..+++.|++.|
T Consensus        73 V~ILrgg~~~~~~l~~~l~~~~v~~i~~~r~~~t~~~~~~~~~lp~~i~~~~VllvDd~laTG~Tl---~~ai~~L~~~G  149 (207)
T TIGR01091        73 VPILRAGLGMVDGVLKLIPEAKVGHVGAYRNEETLKPVPYYSKLPEDIDERTVIVLDPMLATGGTM---IAALDLLKKRG  149 (207)
T ss_pred             EEEeCCcHHHHHHHHHhCCcCceeEEEEEeCCCCCCCEEEEecCCCCCCCCEEEEECCCccchHHH---HHHHHHHHHcC
Confidence            33356788999999999943677766665532 2322 247778889999999999777554 333   34456667889


Q ss_pred             CCeEEEEee
Q 027833           96 VASFTLVLP  104 (218)
Q Consensus        96 a~~ItlViP  104 (218)
                      +++|.++..
T Consensus       150 ~~~I~v~~l  158 (207)
T TIGR01091       150 AKKIKVLSI  158 (207)
T ss_pred             CCEEEEEEE
Confidence            999988766

that includes uracil phosphoribosyltransferase, uridine kinases, and other, uncharacterized proteins.

>PRK08525 amidophosphoribosyltransferase; Provisional

Probab=89.25  E-value=2.5  Score=40.38  Aligned_cols=88  Identities=11%  Similarity=0.072  Sum_probs=53.6

Q ss_pred             CcEEEEecCCcHHHHHHHHHHcCCCceeeeeE-eecC-----CC---CC----eeEEEe-cCCCCCCeEEEEEecCCchh
Q 027833           15 KQVHLFYCVECEELARKVAAQSDLITLQSINW-RNFA-----DG---WP----NLYINS-AHDIRGQHVAFLASFSSPGV   80 (218)
Q Consensus        15 ~~~~i~~g~~~~~La~~Ia~~l~~~~~~~~~~-~~Fp-----DG---~~----E~~v~i-~~~vrG~dV~Iiqs~~~pd~   80 (218)
                      .++++..-.+....|..+|+.| ++++...-. +++.     +.   ++    ...+.. .+.+.||+|+||......-.
T Consensus       276 ~d~Vv~vPd~g~~~A~~~A~~l-gip~~~~l~rk~~~~r~~i~~~qr~rn~~~~~~~~~~~~~v~gK~VlLVDDvitTG~  354 (445)
T PRK08525        276 ADFVVPVPDSGVPAAIGYAQES-GIPFEMAIVRNHYVGRTFIEPTQEMRNLKVKLKLNPMSKVLEGKRIVVIDDSIVRGT  354 (445)
T ss_pred             CCeEEECCchHHHHHHHHHHHh-CCCccceEEEeeccccccCCHHHHHHhhheeEEecccccccCCCeEEEEecccCcHH
Confidence            3444444444567899999999 887632111 2221     11   01    122222 34589999999987765533


Q ss_pred             HHHHHHHHHhcccCCCCeEEEEeec
Q 027833           81 IFEQISVIYALPRLFVASFTLVLPF  105 (218)
Q Consensus        81 lmELlll~~alr~~ga~~ItlViPY  105 (218)
                      -|.  -++.+||+.||++|.+.+..
T Consensus       355 Tl~--~a~~~Lr~aGA~~V~v~~~h  377 (445)
T PRK08525        355 TSK--KIVSLLRAAGAKEIHLRIAC  377 (445)
T ss_pred             HHH--HHHHHHHhcCCCEEEEEEEC
Confidence            332  36688999999999887643

>PTZ00271 hypoxanthine-guanine phosphoribosyltransferase; Provisional

Probab=89.22  E-value=6.3  Score=34.05  Aligned_cols=85  Identities=12%  Similarity=0.115  Sum_probs=55.7

Q ss_pred             cEEEEecCCcHHHHHHHHHHcCC---C--ceeeeeEeecCCCCC---eeEEE--ecCCCCCCeEEEEEecCCchhHHHHH
Q 027833           16 QVHLFYCVECEELARKVAAQSDL---I--TLQSINWRNFADGWP---NLYIN--SAHDIRGQHVAFLASFSSPGVIFEQI   85 (218)
Q Consensus        16 ~~~i~~g~~~~~La~~Ia~~l~~---~--~~~~~~~~~FpDG~~---E~~v~--i~~~vrG~dV~Iiqs~~~pd~lmELl   85 (218)
                      .++|=-.+++-.+|..+++.| +   +  ++..+....|-||..   +..+.  +..+++|++|+||-.+.+.-.-|  .
T Consensus        59 ~vivgVlkGg~~fa~dL~r~L-~~~~~~~~vdfi~vssY~~~~~s~g~~~i~~~~~~~i~gk~VLIVDDIvDTG~TL--~  135 (211)
T PTZ00271         59 LYLLCVLKGSFIFTADLARFL-ADEGVPVKVEFICASSYGTGVETSGQVRMLLDVRDSVENRHILIVEDIVDSAITL--Q  135 (211)
T ss_pred             eEEEEEcCCCHHHHHHHHHHh-cccCCCeeEEEEEEEecCCCCcccCceEEecCCCCCCCCCEEEEEecccCCHHHH--H
Confidence            345555778889999999998 5   3  467788888865411   33432  35689999999998876652222  2


Q ss_pred             HHHHhcccCCCCeE-EEEe
Q 027833           86 SVIYALPRLFVASF-TLVL  103 (218)
Q Consensus        86 ll~~alr~~ga~~I-tlVi  103 (218)
                      .+++.+++.++++| ++++
T Consensus       136 ~v~~~l~~~~p~svk~avL  154 (211)
T PTZ00271        136 YLMRFMLAKKPASLKTVVL  154 (211)
T ss_pred             HHHHHHHhcCCCEEEEEEE
Confidence            23344555678888 4443

>PRK05205 bifunctional pyrimidine regulatory protein PyrR uracil phosphoribosyltransferase; Provisional

Probab=88.95  E-value=5.5  Score=32.87  Aligned_cols=86  Identities=16%  Similarity=0.110  Sum_probs=52.1

Q ss_pred             CcEEEEecCCcHHHHHHHHHHcC---C--CceeeeeEeecCCCCC---ee-E---EEecCCCCCCeEEEEEecCCc-hhH
Q 027833           15 KQVHLFYCVECEELARKVAAQSD---L--ITLQSINWRNFADGWP---NL-Y---INSAHDIRGQHVAFLASFSSP-GVI   81 (218)
Q Consensus        15 ~~~~i~~g~~~~~La~~Ia~~l~---~--~~~~~~~~~~FpDG~~---E~-~---v~i~~~vrG~dV~Iiqs~~~p-d~l   81 (218)
                      ..+++--..++..+|..+++.|+   +  +++..+....|-|+..   +. .   ..+..++.|++|+||..+.+. ..+
T Consensus        32 ~~viv~il~gG~~~a~~La~~L~~~~~~~~~~~~l~~~~y~~~~~~~~~~~~~~~~~l~~~v~gr~VLIVDDIidTG~Tl  111 (176)
T PRK05205         32 NLVLVGIKTRGVWLAERLAERLEQLEGVDVPVGELDITLYRDDLTKKGLHPQVKPTDIPFDIEGKRVILVDDVLYTGRTI  111 (176)
T ss_pred             CeEEEEEccCCHHHHHHHHHHHHHHcCCCCccceEEEEEeecCccccCcccccccccCCCCCCCCEEEEEecccCcHHHH
Confidence            34555556667888999999882   1  2355555566655310   11 1   234557999999999887666 333


Q ss_pred             HHHHHHHHhcccCC-CCeEEEEe
Q 027833           82 FEQISVIYALPRLF-VASFTLVL  103 (218)
Q Consensus        82 mELlll~~alr~~g-a~~ItlVi  103 (218)
                      .+   +++.|++.| +++|.++.
T Consensus       112 ~~---~~~~L~~~G~~~~v~~av  131 (176)
T PRK05205        112 RA---ALDALFDYGRPARVQLAV  131 (176)
T ss_pred             HH---HHHHHHhcCCCcEEEEEE
Confidence            33   345666777 67764443

>TIGR01367 pyrE_Therm orotate phosphoribosyltransferase, Thermus family

Probab=88.77  E-value=11  Score=31.72  Aligned_cols=77  Identities=14%  Similarity=0.053  Sum_probs=51.2

Q ss_pred             CCcEEEEecCCcHHHHHHHHHHcCCCceeeeeEeecCCCCCeeEEEecC-CCCCCeEEEEEecCCc-hhHHHHHHHHHhc
Q 027833           14 KKQVHLFYCVECEELARKVAAQSDLITLQSINWRNFADGWPNLYINSAH-DIRGQHVAFLASFSSP-GVIFEQISVIYAL   91 (218)
Q Consensus        14 ~~~~~i~~g~~~~~La~~Ia~~l~~~~~~~~~~~~FpDG~~E~~v~i~~-~vrG~dV~Iiqs~~~p-d~lmELlll~~al   91 (218)
                      +.++++=...+.-.+|..+|..| +.+....  ++. .|  +..+.-.. ..+|++|+||..+.+. ..+.+..   +.+
T Consensus        58 ~~d~Ivgi~~gGi~~A~~la~~L-~~~~i~~--~k~-~~--~~~~~~~~~l~~G~~VLIVDDIi~TG~Tl~~a~---~~l  128 (187)
T TIGR01367        58 KVDFIVGPAMGGVILGYEVARQL-SVRSIFA--ERE-GG--GMKLRRGFAVKPGEKFVAVEDVVTTGGSLLEAI---RAI  128 (187)
T ss_pred             CCCEEEEEccCcHHHHHHHHHHh-CCCeEEE--EEe-CC--cEEEeecccCCCCCEEEEEEeeecchHHHHHHH---HHH
Confidence            34555545567888999999999 8886433  332 26  66655443 3589999999888766 4443333   446


Q ss_pred             ccCCCCeE
Q 027833           92 PRLFVASF   99 (218)
Q Consensus        92 r~~ga~~I   99 (218)
                      ++.|++.+
T Consensus       129 ~~~Ga~vv  136 (187)
T TIGR01367       129 EGQGGQVV  136 (187)
T ss_pred             HHcCCeEE
Confidence            78898766

This model represents a distinct clade of orotate phosphoribosyltransferases. Members include the experimentally determined example from Thermus aquaticus and additional examples from Caulobacter crescentus, Helicobacter pylori, Mesorhizobium loti, and related species.

>TIGR01090 apt adenine phosphoribosyltransferase

Probab=88.67  E-value=3.7  Score=33.65  Aligned_cols=82  Identities=11%  Similarity=-0.059  Sum_probs=48.4

Q ss_pred             cEEEEecCCcHHHHHHHHHHcCCCceeeeeEeec------------CCCCCeeEEEecCCCCCCeEEEEEecCCc-hhHH
Q 027833           16 QVHLFYCVECEELARKVAAQSDLITLQSINWRNF------------ADGWPNLYINSAHDIRGQHVAFLASFSSP-GVIF   82 (218)
Q Consensus        16 ~~~i~~g~~~~~La~~Ia~~l~~~~~~~~~~~~F------------pDG~~E~~v~i~~~vrG~dV~Iiqs~~~p-d~lm   82 (218)
                      ..++=...+.-.+|..+|+.| +++...+.-...            .+|+..+.+......+|++|+||..+... ..+.
T Consensus        48 d~ivgi~~~G~~~A~~la~~L-~~~~~~i~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gk~VLIVDDIitTG~Tl~  126 (169)
T TIGR01090        48 DYIVGPEARGFIFGAALAYKL-GVGFVPVRKPGKLPGETISASYDLEYGKDQLEIHKDAIKPGQRVLIVDDLLATGGTAE  126 (169)
T ss_pred             CEEEeehhccHHHHHHHHHHH-CCCEEEEEeCCCCCCceeeeEEeeccCceEEEEehhhcCCcCEEEEEeccccchHHHH
Confidence            333333345568999999999 888754332221            23311233332345689999999777655 3333


Q ss_pred             HHHHHHHhcccCCCCeEEE
Q 027833           83 EQISVIYALPRLFVASFTL  101 (218)
Q Consensus        83 ELlll~~alr~~ga~~Itl  101 (218)
                      +   +++.+++.|++.+.+
T Consensus       127 ~---a~~~L~~~Ga~~v~~  142 (169)
T TIGR01090       127 A---TDELIRKLGGEVVEA  142 (169)
T ss_pred             H---HHHHHHHcCCEEEEE
Confidence            3   445666788876543

A phylogenetic analysis suggested omitting the bi-directional best hit homologs from the spirochetes from the seed for this model and making only tentative predictions of adenine phosphoribosyltransferase function for this lineage.

>PRK00455 pyrE orotate phosphoribosyltransferase; Validated

Probab=87.95  E-value=5.6  Score=33.50  Aligned_cols=81  Identities=15%  Similarity=0.037  Sum_probs=50.5

Q ss_pred             CCcEEEEecCCcHHHHHHHHHHcCCCceeeeeEeecCCCCCeeEEEecCCCCCCeEEEEEecCCc-hhHHHHHHHHHhcc
Q 027833           14 KKQVHLFYCVECEELARKVAAQSDLITLQSINWRNFADGWPNLYINSAHDIRGQHVAFLASFSSP-GVIFEQISVIYALP   92 (218)
Q Consensus        14 ~~~~~i~~g~~~~~La~~Ia~~l~~~~~~~~~~~~FpDG~~E~~v~i~~~vrG~dV~Iiqs~~~p-d~lmELlll~~alr   92 (218)
                      ...+++=...++-.+|..+|..| +.++....-....-|+ +..+. ....+|++|+||..+-+. ..+.+.   ++.++
T Consensus        64 ~~d~Ivgi~~gG~~~A~~la~~L-~~~~~~~rk~~~~~g~-~~~~~-~~~~~g~~VliVDDvi~tG~Tl~~~---~~~l~  137 (202)
T PRK00455         64 EFDVVAGPATGGIPLAAAVARAL-DLPAIFVRKEAKDHGE-GGQIE-GRRLFGKRVLVVEDVITTGGSVLEA---VEAIR  137 (202)
T ss_pred             CCCEEEecccCcHHHHHHHHHHh-CCCEEEEecccCCCCC-CceEE-ccCCCCCEEEEEecccCCcHHHHHH---HHHHH
Confidence            33455544567888999999999 8887654332223331 12222 235679999999887665 444444   45566


Q ss_pred             cCCCCeEE
Q 027833           93 RLFVASFT  100 (218)
Q Consensus        93 ~~ga~~It  100 (218)
                      +.|++.+.
T Consensus       138 ~~Ga~~v~  145 (202)
T PRK00455        138 AAGAEVVG  145 (202)
T ss_pred             HcCCEEEE
Confidence            77876653

>PRK07272 amidophosphoribosyltransferase; Provisional

Probab=87.69  E-value=3.9  Score=39.59  Aligned_cols=117  Identities=14%  Similarity=0.132  Sum_probs=73.3

Q ss_pred             CCcHHHHHHHHHHcCCCceeeeeE------eec--CC-CCCeeEEE-----ecCCCCCCeEEEEEecCCchhHHHHHHHH
Q 027833           23 VECEELARKVAAQSDLITLQSINW------RNF--AD-GWPNLYIN-----SAHDIRGQHVAFLASFSSPGVIFEQISVI   88 (218)
Q Consensus        23 ~~~~~La~~Ia~~l~~~~~~~~~~------~~F--pD-G~~E~~v~-----i~~~vrG~dV~Iiqs~~~pd~lmELlll~   88 (218)
                      +++..+|..+|+.+ ++++..--+      ++|  |+ .+++..++     +...++|++|+||...-.--.-+.  -++
T Consensus       294 nqa~~lA~~la~~l-gip~~~~lvk~~~~~rt~~~~~q~~R~~~vr~~f~~~~~~~~gk~vllVDDvittG~T~~--~~~  370 (484)
T PRK07272        294 NSSLSAASGYAEES-GLPYEMGLVKNQYVARTFIQPTQELREQGVRMKLSAVSGVVKGKRVVMVDDSIVRGTTSR--RIV  370 (484)
T ss_pred             HHHHHHHHHHHHHH-CCCcccCeEEEccCCccccCCCHHHHHHHHhhCccccccccCCCEEEEEccccCchHHHH--HHH
Confidence            44557899999999 888743211      244  23 11222222     235688999999977644422222  356


Q ss_pred             HhcccCCCCeEEEEee--------cCCCccccccCCCCCcchHHHHHHHHhcCCCCCCCCCEEEEEeCCc
Q 027833           89 YALPRLFVASFTLVLP--------FFPTGSFERMEEEGDVATAFTMARILSNIPTSRGGPTSLVIYDIHA  150 (218)
Q Consensus        89 ~alr~~ga~~ItlViP--------Yl~YsRQDR~~~~Ge~vsak~va~lL~~~~~~~~G~d~vitvDlHs  150 (218)
                      .+|+++||++|.+.+-        |++..+++|.-.-..--+...+++.|        |+|.+..+.+..
T Consensus       371 ~~L~~~Ga~~v~~~~~~p~~~~~c~ygid~~~~~~lia~~~~~~ei~~~~--------~~dsl~~~~~~~  432 (484)
T PRK07272        371 QLLKEAGAKEVHVAIASPELKYPCFYGIDIQTRRELISANHSVEEICDII--------GADSLTYLSVDG  432 (484)
T ss_pred             HHHHhcCCcEEEEEEeCCccccChhhhccCcCHHHHHhcCCCHHHHHHHh--------CCCEEEEecHHH
Confidence            7788999999998887        77777777663223334556666665        467777776643

>PRK02304 adenine phosphoribosyltransferase; Provisional

Probab=87.19  E-value=7.4  Score=31.98  Aligned_cols=80  Identities=15%  Similarity=0.060  Sum_probs=47.7

Q ss_pred             cEEEEecCCcHHHHHHHHHHcCCCceeeeeEee-cC-----------CCCCeeEEEecCCCCCCeEEEEEecCCc-hhHH
Q 027833           16 QVHLFYCVECEELARKVAAQSDLITLQSINWRN-FA-----------DGWPNLYINSAHDIRGQHVAFLASFSSP-GVIF   82 (218)
Q Consensus        16 ~~~i~~g~~~~~La~~Ia~~l~~~~~~~~~~~~-Fp-----------DG~~E~~v~i~~~vrG~dV~Iiqs~~~p-d~lm   82 (218)
                      ..++=...+.-.+|..+|..| +.++..+.-.+ ++           .|+..+++.-...++|++|+||..+.+. ..+ 
T Consensus        53 d~Ivgv~~~Gi~~a~~la~~l-~~p~~~~rk~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~g~~VLIVDDivtTG~Tl-  130 (175)
T PRK02304         53 DKIVGIEARGFIFGAALAYKL-GIGFVPVRKPGKLPRETISESYELEYGTDTLEIHKDAIKPGDRVLIVDDLLATGGTL-  130 (175)
T ss_pred             CEEEEEccchHHHHHHHHHHh-CCCEEEEEcCCCCCCceEeEEEecccCceEEEEchhhcCCCCEEEEEeCCccccHHH-
Confidence            344434455668999999999 88875432211 11           1311233322234889999999888666 333 


Q ss_pred             HHHHHHHhcccCCCCeE
Q 027833           83 EQISVIYALPRLFVASF   99 (218)
Q Consensus        83 ELlll~~alr~~ga~~I   99 (218)
                        .-+++.+++.|++.+
T Consensus       131 --~~~~~~l~~~Ga~~v  145 (175)
T PRK02304        131 --EAAIKLLERLGAEVV  145 (175)
T ss_pred             --HHHHHHHHHcCCEEE
Confidence              334455678888654

>PRK13811 orotate phosphoribosyltransferase; Provisional

Probab=86.51  E-value=5.9  Score=32.72  Aligned_cols=83  Identities=17%  Similarity=0.068  Sum_probs=53.9

Q ss_pred             EEEEecCCcHHHHHHHHHHcCCCceeeeeEeecCCCCCeeEEEecCCCCCCeEEEEEecCCc-hhHHHHHHHHHhcccCC
Q 027833           17 VHLFYCVECEELARKVAAQSDLITLQSINWRNFADGWPNLYINSAHDIRGQHVAFLASFSSP-GVIFEQISVIYALPRLF   95 (218)
Q Consensus        17 ~~i~~g~~~~~La~~Ia~~l~~~~~~~~~~~~FpDG~~E~~v~i~~~vrG~dV~Iiqs~~~p-d~lmELlll~~alr~~g   95 (218)
                      .++=...+.-.+|..+|..| |.+...+.-.....|  +..... .+++|++|+||..+-+. ..+.+   .++.++++|
T Consensus        59 ~Vvg~~~gGi~~A~~~a~~l-~~p~~~~rK~~k~~g--~~~~~~-g~~~g~~VlIVDDvi~TG~T~~~---~~~~l~~~G  131 (170)
T PRK13811         59 VVAGVAVGGVPLAVAVSLAA-GKPYAIIRKEAKDHG--KAGLII-GDVKGKRVLLVEDVTTSGGSALY---GIEQLRAAG  131 (170)
T ss_pred             EEEecCcCcHHHHHHHHHHH-CCCEEEEecCCCCCC--CcceEE-cccCCCEEEEEEecccccHHHHH---HHHHHHHCC
Confidence            33333344668999999999 899876665555667  544433 35899999999887655 55444   445566777


Q ss_pred             CCeEEEEeecCC
Q 027833           96 VASFTLVLPFFP  107 (218)
Q Consensus        96 a~~ItlViPYl~  107 (218)
                      | +++-++-.+-
T Consensus       132 a-~v~~~~~~vd  142 (170)
T PRK13811        132 A-VVDDVVTVVD  142 (170)
T ss_pred             C-eEEEEEEEEE
Confidence            6 4444444443

>PRK09123 amidophosphoribosyltransferase; Provisional

Probab=86.15  E-value=11  Score=36.52  Aligned_cols=121  Identities=17%  Similarity=0.049  Sum_probs=68.9

Q ss_pred             EEEEecCCcHHHHHHHHHHcCCCceeeee-EeecCC--------CCCeeEEEe-----cCCCCCCeEEEEEecCCchhHH
Q 027833           17 VHLFYCVECEELARKVAAQSDLITLQSIN-WRNFAD--------GWPNLYINS-----AHDIRGQHVAFLASFSSPGVIF   82 (218)
Q Consensus        17 ~~i~~g~~~~~La~~Ia~~l~~~~~~~~~-~~~FpD--------G~~E~~v~i-----~~~vrG~dV~Iiqs~~~pd~lm   82 (218)
                      ++|--..++..+|..+++.+ ++++...- ..+|-.        .+++..+++     .+.++|++|++|......-.-+
T Consensus       298 ~Vv~VP~sg~~~A~~la~~l-gip~~~~lir~~y~grt~i~~~q~~r~~~v~~k~~~~~~~~~gk~vvlvDD~i~tG~Tl  376 (479)
T PRK09123        298 VVVPVPDSGVPAAIGYAQES-GIPFELGIIRNHYVGRTFIQPTQQIRNLGVKLKHNANRAVIEGKRVVLVDDSIVRGTTS  376 (479)
T ss_pred             EEEEcCccHHHHHHHHHHhc-CCCeeheEEEEeecCccccccccccccccEEEEecccccccCCCEEEEEeceeCchHHH
Confidence            43333344557899999999 88875311 223321        112333443     2347899999998775552222


Q ss_pred             HHHHHHHhcccCCCCeEEEEe-----ecCCCcc---ccccCCCCCcchHHHHHHHHhcCCCCCCCCCEEEEEeC
Q 027833           83 EQISVIYALPRLFVASFTLVL-----PFFPTGS---FERMEEEGDVATAFTMARILSNIPTSRGGPTSLVIYDI  148 (218)
Q Consensus        83 ELlll~~alr~~ga~~ItlVi-----PYl~YsR---QDR~~~~Ge~vsak~va~lL~~~~~~~~G~d~vitvDl  148 (218)
                        .-+++.|++.||++|.+.+     -|=.|.-   .+|.-.-+--.+..-+++.|        |+|.+..+.+
T Consensus       377 --~~~~~~l~~~Ga~~v~~~~~~p~~~~~~~~gid~~~~~~l~~~~~~~~ei~~~i--------gadsl~yls~  440 (479)
T PRK09123        377 --RKIVQMLRDAGAKEVHLRIASPPITHPCFYGIDTPERSKLLAATHSLEEMAEYI--------GADSLAFLSI  440 (479)
T ss_pred             --HHHHHHHHHcCCCEEEEEEcCCCCccceeecCCCCCHHHHHHcCCCHHHHHHHh--------CCCeEeccCH
Confidence              2467788999999999988     3433333   33331112223455555555        4566655443

>PF00156 Pribosyltran: Phosphoribosyl transferase domain; InterPro: IPR000836 The name PRT comes from phosphoribosyltransferase (PRTase) enzymes, which carry out phosphoryl transfer reactions on 5-phosphoribosyl-alpha1-pyrophosphate PRPP, an activated form of ribose-5-phosphate

Probab=85.51  E-value=13  Score=27.81  Aligned_cols=84  Identities=20%  Similarity=0.135  Sum_probs=53.5

Q ss_pred             EEEEecCCcHHHHHHHHHHcCCCceeeeeEe----------ecCCCCCeeEEEecCCCCCCeEEEEEecCCc-hhHHHHH
Q 027833           17 VHLFYCVECEELARKVAAQSDLITLQSINWR----------NFADGWPNLYINSAHDIRGQHVAFLASFSSP-GVIFEQI   85 (218)
Q Consensus        17 ~~i~~g~~~~~La~~Ia~~l~~~~~~~~~~~----------~FpDG~~E~~v~i~~~vrG~dV~Iiqs~~~p-d~lmELl   85 (218)
                      .++=-..+.-.+|..++..| +.+.......          .-..+-..........+.|++|+||..+.+. ..+.+. 
T Consensus        30 ~ivgi~~~G~~~a~~la~~l-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gk~vliVDDvi~tG~Tl~~~-  107 (125)
T PF00156_consen   30 VIVGIPRGGIPLAAALARAL-GIPLVFVRKRKSYYPGSDKTSREKNNQELFIIDKEDIKGKRVLIVDDVIDTGGTLKEA-  107 (125)
T ss_dssp             EEEEETTTTHHHHHHHHHHH-THEEEEEEEEEEEESEEEEEEEETEEEEEEEEESSSGTTSEEEEEEEEESSSHHHHHH-
T ss_pred             EEEeehhccHHHHHHHHHHh-CCCccceeeeecccccchhhhhccCceEEeecccccccceeEEEEeeeEcccHHHHHH-
Confidence            44434556778999999999 7876433321          1111100233344688999999999988666 555443 


Q ss_pred             HHHHhcccCCCCeEEEEee
Q 027833           86 SVIYALPRLFVASFTLVLP  104 (218)
Q Consensus        86 ll~~alr~~ga~~ItlViP  104 (218)
                        ++.|++.|++.|.+..+
T Consensus       108 --~~~L~~~g~~~v~~~vl  124 (125)
T PF00156_consen  108 --IELLKEAGAKVVGVAVL  124 (125)
T ss_dssp             --HHHHHHTTBSEEEEEEE
T ss_pred             --HHHHHhCCCcEEEEEEE
Confidence              44666889998876653

Members of Phosphoribosyltransferase (PRT) are catalytic and are regulatory proteins involved in nucleotide synthesis and salvage []. This includes a range of diverse phosphoribosyl transferase enzymes including adenine phosphoribosyltransferase (2.4.2.7 from EC); hypoxanthine-guanine-xanthine phosphoribosyltransferase; hypoxanthine phosphoribosyltransferase (2.4.2.8 from EC); ribose-phosphate pyrophosphokinase (2.7.6.1 from EC); amidophosphoribosyltransferase (2.4.2.14 from EC); orotate phosphoribosyltransferase (2.4.2.10 from EC);uracil phosphoribosyltransferase (2.4.2.9 from EC); and xanthine-guanine phosphoribosyltransferase (2.4.2.22 from EC). Not all PRT proteins are enzymes. For example, in some bacteria PRT proteins regulate the expression of purine and pyrimidine synthetic genes. Members of PRT are defined by the protein fold and by a short 13-residue sequence motif, The motif consists of four hydrophobic amino acids, two acidic amino acids and seven amino acids of variable character, usually including glycine and threonine. The motif has been predicted to be a PRPP-binding site in advance of structural information [, ]. Apart of this motif, different PRT proteins have a low level of sequence identity, less than 15%. The PRT sequence motif is only found in PRTases from the nucleotide synthesis and salvage pathways. Other PRTases, from the tryptophan, histidine and nicotinamide synthetic and salvage pathways, lack the PRT sequence motif and appear to be unrelated to each other and unrelated to the PRT family.; GO: 0009116 nucleoside metabolic process; PDB: 2JBH_A 1Y0B_D 2FXV_B 1GPH_1 1AO0_D 1ORO_B 1VCH_C 2WNS_A 2PRZ_B 2PS1_A ....

>TIGR01203 HGPRTase hypoxanthine phosphoribosyltransferase

Probab=85.04  E-value=1.2  Score=36.63  Aligned_cols=39  Identities=10%  Similarity=-0.000  Sum_probs=30.6

Q ss_pred             HHHHHHHHhhCCCCCCEEEEeCCcccHHHHHHHHHHcCc
Q 027833          169 IPLLKQRLHQLPDANNLLHFRMMEPGSDSTRCWIISLRW  207 (218)
Q Consensus       169 ~~~l~~~l~~~~~~~~~vvvsPD~Ga~~ra~~~a~~l~~  207 (218)
                      ...+++.+.+....++++||+|+.||+.+|+.+++.|+.
T Consensus        12 i~~lA~~I~~~~~~~~~vvv~i~~GG~~~a~~l~~~L~~   50 (166)
T TIGR01203        12 IAELAKQITEDYAGKPLVLLCVLKGSFPFFADLIRYIAV   50 (166)
T ss_pred             HHHHHHHHHHHcCCCCeEEEEEccCCHHHHHHHHHhcCC
Confidence            445666665432346899999999999999999999985

Sequence differences as small as a single residue can affect whether members of this family act on hypoxanthine and guanine or hypoxanthine only. The designation of this model as equivalog reflects hypoxanthine specificity and does not reflect whether or not guanine can replace hypoxanthine.

>PRK08341 amidophosphoribosyltransferase; Provisional

Probab=84.55  E-value=6.2  Score=37.73  Aligned_cols=84  Identities=15%  Similarity=0.094  Sum_probs=52.9

Q ss_pred             cEEEEecCCcHHHHHHHHHHcCCCceeeeeEeec--------CCCCCeeEEEe-----cCCCCCCeEEEEEecCCchhHH
Q 027833           16 QVHLFYCVECEELARKVAAQSDLITLQSINWRNF--------ADGWPNLYINS-----AHDIRGQHVAFLASFSSPGVIF   82 (218)
Q Consensus        16 ~~~i~~g~~~~~La~~Ia~~l~~~~~~~~~~~~F--------pDG~~E~~v~i-----~~~vrG~dV~Iiqs~~~pd~lm   82 (218)
                      .+++-.-.+...+|..+|+.+ |+++...-.++.        |.. ++..+++     ...++|++|+||...-.--.-+
T Consensus       273 D~Vv~VPdsg~~~A~~~a~~l-gip~~~~l~k~r~~~rtfi~~~q-r~~~~~~k~~~~~~~v~gk~VlLVDD~IttGtTl  350 (442)
T PRK08341        273 DVVIAVPDSGRTAALGFAHES-GIPYMEGLIKNRYIGRTFIMPSG-RELKVKLKLSPVREVINGKRVVLVDDSIVRGTTM  350 (442)
T ss_pred             ceEEEecCchHHHHHHHHHHh-CCCchheEEEeccccccccCcCc-hhhhheeeecccccccCCCEEEEEeeeeccHHHH
Confidence            344433344446899999999 898864333322        111 2433322     3567999999997765443333


Q ss_pred             HHHHHHHhcccCCCCeEEEEe
Q 027833           83 EQISVIYALPRLFVASFTLVL  103 (218)
Q Consensus        83 ELlll~~alr~~ga~~ItlVi  103 (218)
                      .  -++.+|+++||++|.+.+
T Consensus       351 ~--~~~~~L~~aGAk~V~~~~  369 (442)
T PRK08341        351 K--RIVKMLRDAGAREVHVRI  369 (442)
T ss_pred             H--HHHHHHHhcCCcEEEEEE
Confidence            2  266888899999998876

>PRK05793 amidophosphoribosyltransferase; Provisional

Probab=84.47  E-value=4.5  Score=38.86  Aligned_cols=86  Identities=9%  Similarity=-0.004  Sum_probs=53.1

Q ss_pred             cEEEEecCCcHHHHHHHHHHcCCCceeee-eEeec-------CCC-CCeeEEEe-----cCCCCCCeEEEEEecCCchhH
Q 027833           16 QVHLFYCVECEELARKVAAQSDLITLQSI-NWRNF-------ADG-WPNLYINS-----AHDIRGQHVAFLASFSSPGVI   81 (218)
Q Consensus        16 ~~~i~~g~~~~~La~~Ia~~l~~~~~~~~-~~~~F-------pDG-~~E~~v~i-----~~~vrG~dV~Iiqs~~~pd~l   81 (218)
                      .+++-.-.+...+|..+|+.+ ++++... ...++       |+. .++..+++     ...++|++|++|.....--.-
T Consensus       290 D~Vv~vPdsg~~~A~~~A~~l-gip~~~~l~r~~~~~rtfi~~~q~~R~~~~~~k~~~~~~~v~gk~VlLVDD~ItTGtT  368 (469)
T PRK05793        290 DIVIGVPDSGIPAAIGYAEAS-GIPYGIGFIKNKYVGRTFIAPSQELRERAVRVKLNPLKVNVEGKRVVLIDDSIVRGTT  368 (469)
T ss_pred             CEEEEcCccHHHHHHHHHHHh-CCCEeeeEEEeeeccccccChhHhhhhhhheEecccCccccCCCEEEEEccccCchHH
Confidence            344434444567899999999 8998542 11121       221 11222222     256899999999776555333


Q ss_pred             HHHHHHHHhcccCCCCeEEEEee
Q 027833           82 FEQISVIYALPRLFVASFTLVLP  104 (218)
Q Consensus        82 mELlll~~alr~~ga~~ItlViP  104 (218)
                      |.  -++.+||++||++|.+.+.
T Consensus       369 l~--~~~~~Lr~aGAk~V~~~~~  389 (469)
T PRK05793        369 SK--RLVELLRKAGAKEVHFRVS  389 (469)
T ss_pred             HH--HHHHHHHHcCCCEEEEEEE
Confidence            32  3778889999999988763

>PRK09162 hypoxanthine-guanine phosphoribosyltransferase; Provisional

Probab=84.36  E-value=1.9  Score=35.91  Aligned_cols=40  Identities=18%  Similarity=0.110  Sum_probs=31.7

Q ss_pred             cHHHHHHHHhhCCCCCCEEEEeCCcccHHHHHHHHHHcCc
Q 027833          168 GIPLLKQRLHQLPDANNLLHFRMMEPGSDSTRCWIISLRW  207 (218)
Q Consensus       168 ~~~~l~~~l~~~~~~~~~vvvsPD~Ga~~ra~~~a~~l~~  207 (218)
                      ....++..+.+....++++||+|+.||...|+.+|+.|+.
T Consensus        25 ~i~~la~~i~~~~~~~~~viV~i~~gg~~~A~~La~~l~~   64 (181)
T PRK09162         25 AIDRMADEITADLADENPLVLCVMGGGLVFTGQLLPRLDF   64 (181)
T ss_pred             HHHHHHHHHHHHcCCCCeEEEEECCCcHHHHHHHHHHcCC
Confidence            3455677765533456789999999999999999999986

>PRK02277 orotate phosphoribosyltransferase-like protein; Provisional

Probab=83.71  E-value=9.3  Score=32.33  Aligned_cols=84  Identities=14%  Similarity=0.048  Sum_probs=52.6

Q ss_pred             cEEEEecCCcHHHHHHHHHHcCCCceeeeeEeecCCCCC---eeEEEe-cCCCCCCeEEEEEecCCc-hhHHHHHHHHHh
Q 027833           16 QVHLFYCVECEELARKVAAQSDLITLQSINWRNFADGWP---NLYINS-AHDIRGQHVAFLASFSSP-GVIFEQISVIYA   90 (218)
Q Consensus        16 ~~~i~~g~~~~~La~~Ia~~l~~~~~~~~~~~~FpDG~~---E~~v~i-~~~vrG~dV~Iiqs~~~p-d~lmELlll~~a   90 (218)
                      .+++=...+.-.+|..+|..| +.++....-+++..|+.   +..+.. ...++|++|+||..+.+. ..+.+..   +.
T Consensus        87 D~Ivgi~~gG~~~A~~lA~~L-~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~gk~VlIVDDVitTG~Tl~~ai---~~  162 (200)
T PRK02277         87 DVVVGIAKSGVPLATLVADEL-GKDLAIYHPKKWDHGEGEKKTGSFSRNFASVEGKRCVIVDDVITSGTTMKETI---EY  162 (200)
T ss_pred             CEEEeeccCCHHHHHHHHHHh-CCCcEEEecccccccccccccceeccccccCCcCEEEEEeeccCchHHHHHHH---HH
Confidence            444444456778999999999 88876555444433310   111111 135789999999887665 5554444   45


Q ss_pred             cccCCCCeEEEEe
Q 027833           91 LPRLFVASFTLVL  103 (218)
Q Consensus        91 lr~~ga~~ItlVi  103 (218)
                      +++.|++.+.++.
T Consensus       163 l~~~Ga~~v~v~v  175 (200)
T PRK02277        163 LKEHGGKPVAVVV  175 (200)
T ss_pred             HHHcCCEEEEEEE
Confidence            6788987775443

>PLN02293 adenine phosphoribosyltransferase

Probab=83.70  E-value=17  Score=30.63  Aligned_cols=83  Identities=11%  Similarity=-0.014  Sum_probs=49.0

Q ss_pred             cEEEEecCCcHHHHHHHHHHcCCCceeeeeEeecCCC------------CCeeEEEecCCCCCCeEEEEEecCCc-hhHH
Q 027833           16 QVHLFYCVECEELARKVAAQSDLITLQSINWRNFADG------------WPNLYINSAHDIRGQHVAFLASFSSP-GVIF   82 (218)
Q Consensus        16 ~~~i~~g~~~~~La~~Ia~~l~~~~~~~~~~~~FpDG------------~~E~~v~i~~~vrG~dV~Iiqs~~~p-d~lm   82 (218)
                      ..++=.....-.||..+|..| +.++..+.-.+..+|            +.-+.++...-.+|++|+||..+-.. ..+.
T Consensus        64 d~Ivg~e~~Gi~lA~~lA~~L-g~p~v~~rK~~k~~~~~~~~~~~~~~g~~~l~l~~~~i~~G~rVlIVDDvitTG~T~~  142 (187)
T PLN02293         64 SVVAGIEARGFIFGPPIALAI-GAKFVPLRKPGKLPGEVISEEYVLEYGTDCLEMHVGAVEPGERALVIDDLIATGGTLC  142 (187)
T ss_pred             CEEEEeCCCchHHHHHHHHHH-CCCEEEEEecCCCCCceEEEEEeccCCceEEEEEcCccCCCCEEEEEeccccchHHHH
Confidence            444433455667999999999 888765444333223            10112222222379999999887655 4444


Q ss_pred             HHHHHHHhcccCCCCeEEEE
Q 027833           83 EQISVIYALPRLFVASFTLV  102 (218)
Q Consensus        83 ELlll~~alr~~ga~~ItlV  102 (218)
                      +.   ++.+++.|++.+.++
T Consensus       143 ~~---~~~l~~~Ga~~v~~~  159 (187)
T PLN02293        143 AA---INLLERAGAEVVECA  159 (187)
T ss_pred             HH---HHHHHHCCCEEEEEE
Confidence            43   466777888665433

>PRK13812 orotate phosphoribosyltransferase; Provisional

Probab=82.56  E-value=7.8  Score=32.29  Aligned_cols=77  Identities=9%  Similarity=-0.016  Sum_probs=49.0

Q ss_pred             cEEEEecCCcHHHHHHHHHHcCCCceeeeeEeecCCCCCeeEEEecCCC-CCCeEEEEEecCCc-hhHHHHHHHHHhccc
Q 027833           16 QVHLFYCVECEELARKVAAQSDLITLQSINWRNFADGWPNLYINSAHDI-RGQHVAFLASFSSP-GVIFEQISVIYALPR   93 (218)
Q Consensus        16 ~~~i~~g~~~~~La~~Ia~~l~~~~~~~~~~~~FpDG~~E~~v~i~~~v-rG~dV~Iiqs~~~p-d~lmELlll~~alr~   93 (218)
                      ..++=...+.-.+|..+|..| +.++.-..-.+-..|  +.... ...+ +|++|+||..+-+. ..+.+.   ++++++
T Consensus        60 d~ivg~~~ggi~lA~~lA~~l-~~p~~~~rk~~k~yg--~~~~~-~g~~~~g~~VlIVDDvitTG~Tl~~~---~~~l~~  132 (176)
T PRK13812         60 TKLAGVALGAVPLVAVTSVET-GVPYVIARKQAKEYG--TGNRI-EGRLDEGEEVVVLEDIATTGQSAVDA---VEALRE  132 (176)
T ss_pred             CEEEEeecchHHHHHHHHHHH-CCCEEEEeccCCcCC--CCCeE-EecCCCcCEEEEEEEeeCCCHHHHHH---HHHHHH
Confidence            444444455668999999999 898765555444446  33221 2234 89999999887655 555444   455667


Q ss_pred             CCCCeE
Q 027833           94 LFVASF   99 (218)
Q Consensus        94 ~ga~~I   99 (218)
                      .|++-+
T Consensus       133 ~Ga~vv  138 (176)
T PRK13812        133 AGATVN  138 (176)
T ss_pred             CCCeEE
Confidence            787543

>PF01012 ETF: Electron transfer flavoprotein domain; InterPro: IPR014730 Electron transfer flavoproteins (ETFs) serve as specific electron acceptors for primary dehydrogenases, transferring the electrons to terminal respiratory systems

Probab=81.93  E-value=16  Score=29.20  Aligned_cols=103  Identities=17%  Similarity=0.113  Sum_probs=69.9

Q ss_pred             hhHHHHHHHHHhcccCCCCeEEEEeecCCCccccccCCCCC-cchHHHHHHHHhcCCCCCCCCCEEEEEeCCchhhhccc
Q 027833           79 GVIFEQISVIYALPRLFVASFTLVLPFFPTGSFERMEEEGD-VATAFTMARILSNIPTSRGGPTSLVIYDIHALQERFYF  157 (218)
Q Consensus        79 d~lmELlll~~alr~~ga~~ItlViPYl~YsRQDR~~~~Ge-~vsak~va~lL~~~~~~~~G~d~vitvDlHs~~~~~~F  157 (218)
                      +.-.|++-.+..+++..-.++++++-             |. +=....+.+.|.     ..|+|+++.+|-=  ...+| 
T Consensus        15 ~~~~e~l~~A~~La~~~g~~v~av~~-------------G~~~~~~~~l~~~l~-----~~G~d~v~~~~~~--~~~~~-   73 (164)
T PF01012_consen   15 PVSLEALEAARRLAEALGGEVTAVVL-------------GPAEEAAEALRKALA-----KYGADKVYHIDDP--ALAEY-   73 (164)
T ss_dssp             HHHHHHHHHHHHHHHCTTSEEEEEEE-------------ETCCCHHHHHHHHHH-----STTESEEEEEE-G--GGTTC-
T ss_pred             HHHHHHHHHHHHHHhhcCCeEEEEEE-------------ecchhhHHHHhhhhh-----hcCCcEEEEecCc--ccccc-
Confidence            56668888888888755457877752             43 345666777887     7999999999832  22222 


Q ss_pred             cccccccccccHHHHHHHHhhCCCCCCEEEEeCCcccHHHHHHHHHHcCcccc
Q 027833          158 SDHVLPLFETGIPLLKQRLHQLPDANNLLHFRMMEPGSDSTRCWIISLRWCVP  210 (218)
Q Consensus       158 ~~~~~~l~~~~~~~l~~~l~~~~~~~~~vvvsPD~Ga~~ra~~~a~~l~~~~~  210 (218)
                      +  .+.+    ...+++.+++.  ..+.++++.+.-+.+-+-.+|..|+|.+-
T Consensus        74 ~--~~~~----a~~l~~~~~~~--~~~lVl~~~t~~g~~la~~lA~~L~~~~v  118 (164)
T PF01012_consen   74 D--PEAY----ADALAELIKEE--GPDLVLFGSTSFGRDLAPRLAARLGAPLV  118 (164)
T ss_dssp             ---HHHH----HHHHHHHHHHH--T-SEEEEESSHHHHHHHHHHHHHHT-EEE
T ss_pred             C--HHHH----HHHHHHHHHhc--CCCEEEEcCcCCCCcHHHHHHHHhCCCcc
Confidence            1  1122    45677777662  45688888888899999999999998654

They can be functionally classified into constitutive, "housekeeping" ETFs, mainly involved in the oxidation of fatty acids (Group I), and ETFs produced by some prokaryotes under specific growth conditions, receiving electrons only from the oxidation of specific substrates (Group II) []. ETFs are heterodimeric proteins composed of an alpha and beta subunit, and contain an FAD cofactor and AMP [, , , , ]. ETF consists of three domains: domains I and II are formed by the N- and C-terminal portions of the alpha subunit, respectively, while domain III is formed by the beta subunit. Domains I and III share an almost identical alpha-beta-alpha sandwich fold, while domain II forms an alpha-beta-alpha sandwich similar to that of bacterial flavodoxins. FAD is bound in a cleft between domains II and III, while domain III binds the AMP molecule. Interactions between domains I and III stabilise the protein, forming a shallow bowl where domain II resides. This entry represents the N-terminal domain of both the alpha and beta subunits from Group I and Group II ETFs.; PDB: 1EFP_B 3FET_B 3IH5_B 2A1T_S 1EFV_B 1T9G_S 2A1U_B 1O96_E 1O94_C 3CLU_C ....

>TIGR00336 pyrE orotate phosphoribosyltransferase

Probab=81.92  E-value=11  Score=31.08  Aligned_cols=77  Identities=12%  Similarity=-0.016  Sum_probs=46.9

Q ss_pred             CCcHHHHHHHHHHcCCCc-----eeeeeEeecCCCCCeeEEEecCCCCCCeEEEEEecCCc-hhHHHHHHHHHhcccCCC
Q 027833           23 VECEELARKVAAQSDLIT-----LQSINWRNFADGWPNLYINSAHDIRGQHVAFLASFSSP-GVIFEQISVIYALPRLFV   96 (218)
Q Consensus        23 ~~~~~La~~Ia~~l~~~~-----~~~~~~~~FpDG~~E~~v~i~~~vrG~dV~Iiqs~~~p-d~lmELlll~~alr~~ga   96 (218)
                      .+.-.+|..+|..| +.+     ..-..-.....|  +......+..+|++|+||..+.+. ..+.+.   ++.++++|+
T Consensus        63 ~gG~~~A~~la~~l-~~~~~~~~~~~~rk~~k~~g--~~~~~~g~~~~g~~VlIVDDvi~TG~Tl~~a---~~~l~~~Ga  136 (173)
T TIGR00336        63 LGGIPIATAVSVKL-AKPGGDIPLCFNRKEAKDHG--EGGNIEGELLEGDKVVVVEDVITTGTSILEA---VEIIQAAGG  136 (173)
T ss_pred             cChHHHHHHHHHHh-cCcCCCceEEEEcCCcccCC--CCCceecCCCCCCEEEEEeccccChHHHHHH---HHHHHHcCC
Confidence            44668999999999 787     433321222335  433333445689999999888766 555444   456677786


Q ss_pred             CeEEEEeecC
Q 027833           97 ASFTLVLPFF  106 (218)
Q Consensus        97 ~~ItlViPYl  106 (218)
                       .+.-++-.+
T Consensus       137 -~v~~~~vlv  145 (173)
T TIGR00336       137 -QVAGVIIAV  145 (173)
T ss_pred             -eEEEEEEEE
Confidence             344444333

The conserved Lys (K) residue at position 101 of the seed alignment has been proposed as the active site for the enzyme.

>TIGR01134 purF amidophosphoribosyltransferase

Probab=80.53  E-value=17  Score=34.64  Aligned_cols=112  Identities=15%  Similarity=0.121  Sum_probs=66.6

Q ss_pred             CCcHHHHHHHHHHcCCCceeeeeE------eec--CCC-CCeeEE--Ee---cCCCCCCeEEEEEecCCc-hhHHHHHHH
Q 027833           23 VECEELARKVAAQSDLITLQSINW------RNF--ADG-WPNLYI--NS---AHDIRGQHVAFLASFSSP-GVIFEQISV   87 (218)
Q Consensus        23 ~~~~~La~~Ia~~l~~~~~~~~~~------~~F--pDG-~~E~~v--~i---~~~vrG~dV~Iiqs~~~p-d~lmELlll   87 (218)
                      .+....|..+|+.+ ++++...-.      ++|  |+. +++..+  ++   ...++|++|+||...... ..+-   -+
T Consensus       282 ~sg~~~A~~la~~l-gip~~~~l~r~~~~~r~~i~~~q~~R~~~v~~k~~~~~~~~~gk~v~lvDD~ittG~T~~---~~  357 (442)
T TIGR01134       282 DSGRSAALGFAQAS-GIPYREGLIKNRYVGRTFIMPTQELRELSVRLKLNPIREVFRGKRVVLVDDSIVRGTTSR---QI  357 (442)
T ss_pred             CCHHHHHHHHHHHh-CCCchHHeEEeccccccccCCCHHHHHHHHhhhcccccccCCCCEEEEEeccccccHHHH---HH
Confidence            33456899999999 888753222      223  332 111112  22   346789999999776544 3333   35


Q ss_pred             HHhcccCCCCeEEEEee--------cCCC---ccccccCCCCCcchHHHHHHHHhcCCCCCCCCCEEEEEeCC
Q 027833           88 IYALPRLFVASFTLVLP--------FFPT---GSFERMEEEGDVATAFTMARILSNIPTSRGGPTSLVIYDIH  149 (218)
Q Consensus        88 ~~alr~~ga~~ItlViP--------Yl~Y---sRQDR~~~~Ge~vsak~va~lL~~~~~~~~G~d~vitvDlH  149 (218)
                      +.+|+++||+.|.+.+-        |++-   +|++....   --+...+++.|        |+|.+..+.+.
T Consensus       358 ~~~l~~~ga~~v~~~~~spp~~~pc~yg~d~~~~~el~~~---~~~~~~i~~~~--------~~~~l~~~~~~  419 (442)
T TIGR01134       358 VKMLRDAGAKEVHVRIASPPIRYPCYYGIDMPTREELIAN---GRTVEEIAKEI--------GADSLAYLSLE  419 (442)
T ss_pred             HHHHHHcCCcEEEEEEccCCccCCcccccCCCCHHHHhhc---CCCHHHHHHHh--------CCCEEEEecHH
Confidence            57888999999998877        6666   55554432   13445555555        35666555443

Alternate name: glutamine phosphoribosylpyrophosphate (PRPP) amidotransferase.

>COG2236 Predicted phosphoribosyltransferases [General function prediction only]

Probab=80.13  E-value=14  Score=31.59  Aligned_cols=73  Identities=16%  Similarity=0.139  Sum_probs=50.9

Q ss_pred             HHHhhhhhcCCCcEEEEecCCcHHHHHHHHHHcCCC-ceeeeeEeecCCC-C--CeeEEEe--cCC-CCCCeEEEEEecC
Q 027833            4 KREIKAKKSQKKQVHLFYCVECEELARKVAAQSDLI-TLQSINWRNFADG-W--PNLYINS--AHD-IRGQHVAFLASFS   76 (218)
Q Consensus         4 ~~~~~~~~~~~~~~~i~~g~~~~~La~~Ia~~l~~~-~~~~~~~~~FpDG-~--~E~~v~i--~~~-vrG~dV~Iiqs~~   76 (218)
                      +|+++.. .-+..++|--+.+.--.|.-|+..| ++ ++.-+.+..+.+- +  .|..+.-  .-+ ++|++|+||..+.
T Consensus        20 A~kI~~s-~~~PDvIiaiaRGG~~pariLsd~L-~~~~l~~i~v~~y~~~~~~~~~~~v~~~~~~d~l~GkkVLIVDDI~   97 (192)
T COG2236          20 AEKIRAS-GFKPDVIVAIARGGLIPARILSDFL-GVKPLYSIKVEHYDETAERDGEAKVKYPITIDPLSGKKVLIVDDIV   97 (192)
T ss_pred             HHHHHHc-CCCCCEEEEEcCCceehHHHHHHHh-CCCceEEEEEEEehhhcccCCcceeecCccccccCCCeEEEEeccc
Confidence            4455443 3456677777888888999999999 77 6777777776652 0  1444443  334 8999999999987


Q ss_pred             Cc
Q 027833           77 SP   78 (218)
Q Consensus        77 ~p   78 (218)
                      +.
T Consensus        98 DT   99 (192)
T COG2236          98 DT   99 (192)
T ss_pred             Cc
Confidence            76

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	218
3lrt_A	286	Ribose-phosphate pyrophosphokinase; phosphoribosyl	3e-04

>3lrt_A Ribose-phosphate pyrophosphokinase; phosphoribosyl transferase, ATP analog binding, ATP-binding, metal-binding, nucleotide biosynthesis; HET: ADP; 1.53A {Thermoplasma volcanium} PDB: 3lpn_A* 3nag_A* 3mbi_A* Length = 286

 Score = 39.8 bits (94), Expect = 3e-04
 Identities = 27/158 (17%), Positives = 59/158 (37%), Gaps = 17/158 (10%)

Query: 27  ELARKVAAQSDLITLQSINWRNFADGWPNLYINSAHDIRGQHVAFLASFSSPGVIFEQIS 86
           +LA ++A +         + R F DG   LY+    D+ G ++  + +  S   + E I 
Sbjct: 11  KLAARIAEELK-TEPVMPDERRFPDG--ELYLRYDEDLTGHNIFIIGNTHSDAEVMEMIL 67

Query: 87  VIYALPRLFVASFTLVLPFFPTGSFERMEEEGDVATAFTMARILSNIPTSRGGPTSLVIY 146
            + A+      S  ++ P++      +  + G+  +    ++IL+ I +S     S+   
Sbjct: 68  TLSAIQDYRTKSVNIIAPYYGYARQHQRYKNGEPIS----SQILTEIYSS--YSNSIATV 121

Query: 147 DIHALQERFYFS---DHVLPLFETGIPLLKQRLHQLPD 181
           DIH  +   Y       +          + +    +  
Sbjct: 122 DIHDEKTLSYSKVKFSDLH-----ANDAIVRYYKNVDV 154

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	218
d1dkua1	159	c.61.1.2 (A:8-166) Phosphoribosylpyrophosphate syn	7e-15
d2c4ka1	160	c.61.1.2 (A:7-166) PRPP synthetase-associated prot	4e-13

>d1dkua1 c.61.1.2 (A:8-166) Phosphoribosylpyrophosphate synthetase {Bacillus subtilis [TaxId: 1423]} Length = 159

class: Alpha and beta proteins (a/b)
fold: PRTase-like
superfamily: PRTase-like
family: Phosphoribosylpyrophosphate synthetase-like
domain: Phosphoribosylpyrophosphate synthetase
species: Bacillus subtilis [TaxId: 1423]

 Score = 67.3 bits (164), Expect = 7e-15
 Identities = 40/163 (24%), Positives = 69/163 (42%), Gaps = 12/163 (7%)

Query: 19  LFYCVECEELARKVAAQSDLITLQSINWRNFADGWPNLYINSAHDIRGQHVAFLASFSSP 78
           +F      ELA+++A     + L   +   F+DG   + IN    IRG     + S S P
Sbjct: 4   IFSLNSNPELAKEIADIVG-VQLGKCSVTRFSDG--EVQINIEESIRGCDCYIIQSTSDP 60

Query: 79  GV--IFEQISVIYALPRLFVASFTLVLPFFPTGSFERMEEEGDVATAFTMARILSNIPTS 136
               I E + ++ AL R    +  +V+P++     +R     +  TA   A +L      
Sbjct: 61  VNEHIMELLIMVDALKRASAKTINIVIPYYGYARQDRKARSREPITAKLFANLLE----- 115

Query: 137 RGGPTSLVIYDIHALQERFYFSDHVLPLFETGIPLLKQRLHQL 179
             G T ++  D+HA Q + +F   +  L   G+P+L +     
Sbjct: 116 TAGATRVIALDLHAPQIQGFFDIPIDHLM--GVPILGEYFEGK 156

>d2c4ka1 c.61.1.2 (A:7-166) PRPP synthetase-associated protein 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 160

class: Alpha and beta proteins (a/b)
fold: PRTase-like
superfamily: PRTase-like
family: Phosphoribosylpyrophosphate synthetase-like
domain: PRPP synthetase-associated protein 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 62.7 bits (152), Expect = 4e-13
 Identities = 31/159 (19%), Positives = 61/159 (38%), Gaps = 14/159 (8%)

Query: 25  CEELARKVAAQSDLITLQSINWRNFADGWPNLYINSAHDIRGQHVAFLASFS--SPGVIF 82
           C ELA+++  +     L         +G     +     +RGQ +  + +        + 
Sbjct: 13  CTELAKRITERLG-AELGKSVVYQETNG--ETRVEIKESVRGQDIFIIQTIPRDVNTAVM 69

Query: 83  EQISVIYALPRLFVASFTLVLPFFPTGSFERMEEEGDVATAFTMARILSNIPTSRGGPTS 142
           E + + YAL      +   V+P+FP     +M + G +      + +         G T 
Sbjct: 70  ELLIMAYALKTACARNIIGVIPYFPYSKQSKMRKRGSIVCKLLASMLAKA------GLTH 123

Query: 143 LVIYDIHALQERFYFSDHVLPLFETGIPLLKQRL-HQLP 180
           ++  D+H  + + +FS  V  L     P L Q +  ++P
Sbjct: 124 IITMDLHQKEIQGFFSFPVDNLR--ASPFLLQYIQEEIP 160

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	218
d1dkua1	159	Phosphoribosylpyrophosphate synthetase {Bacillus s	100.0
d1u9ya1	155	Phosphoribosylpyrophosphate synthetase {Methanocal	100.0
d2c4ka1	160	PRPP synthetase-associated protein 1 {Human (Homo	100.0
d1u9ya2	129	Phosphoribosylpyrophosphate synthetase {Methanocal	97.83
d1dkua2	149	Phosphoribosylpyrophosphate synthetase {Bacillus s	97.55
d2c4ka2	184	PRPP synthetase-associated protein 1 {Human (Homo	97.19
d1hgxa_	173	Hypoxanthine-guanine-xanthine PRTase {Tritrichomon	86.01
d1wd5a_	208	Putative phosphoribosyltransferase TT1426 (TTHA146	84.81

>d1dkua1 c.61.1.2 (A:8-166) Phosphoribosylpyrophosphate synthetase {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: PRTase-like
superfamily: PRTase-like
family: Phosphoribosylpyrophosphate synthetase-like
domain: Phosphoribosylpyrophosphate synthetase
species: Bacillus subtilis [TaxId: 1423]

Probab=100.00  E-value=0  Score=325.03  Aligned_cols=154  Identities=26%  Similarity=0.397  Sum_probs=150.1

Q ss_pred             CEEEEECCCCHHHHHHHHHHCCCCCEEEEEEEECCCCCCEEEEEECCCCCCCEEEEEEECCCC--HHHHHHHHHHHHCCC
Q ss_conf             679995389499999999771997032016755199997268983588899849999732894--439999999974331
Q 027833           16 QVHLFYCVECEELARKVAAQSDLITLQSINWRNFADGWPNLYINSAHDIRGQHVAFLASFSSP--GVIFEQISVIYALPR   93 (218)
Q Consensus        16 ~~~i~~g~s~~~la~~Ia~~l~~~~~~~~~~~~FpDG~~E~~v~i~~~v~G~dV~Iv~s~~~~--d~imELlll~~alr~   93 (218)
                      +|.||+|+++++||++||+.| |.+++++++++||||  |.|+++.+++||+||+|+||+++|  |++||||++++|+|+
T Consensus         1 nm~i~~gss~~~La~~ia~~L-g~~l~~~~~~~FpDG--E~~v~i~~~vrg~dv~ivqs~~~~~nd~lmelll~~~a~k~   77 (159)
T d1dkua1           1 NLKIFSLNSNPELAKEIADIV-GVQLGKCSVTRFSDG--EVQINIEESIRGCDCYIIQSTSDPVNEHIMELLIMVDALKR   77 (159)
T ss_dssp             CEEEEECSSCHHHHHHHHHHH-TCCCCCEEEEECTTS--CEEEEECSCCTTCEEEEECCCCSSHHHHHHHHHHHHHHHHH
T ss_pred             CEEEEECCCCHHHHHHHHHHH-CCCCCCEEEEECCCC--CEEEEEECCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHH
T ss_conf             969995799899999999996-997603188886999--87898614778885089863888837899999999999997


Q ss_pred             CCCCEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCEEEEEECCCHHHHCCCCCCCCCCCCCCHHHHH
Q ss_conf             79976999950588865423578997201999999870699998999979998378032101135443444445179999
Q 027833           94 LFVASFTLVLPFFPTGSFERMEEEGDVATAFTMARILSNIPTSRGGPTSLVIYDIHALQERFYFSDHVLPLFETGIPLLK  173 (218)
Q Consensus        94 ~ga~~ItlViPYl~YsRQDR~~~~ge~isak~va~lL~~~~~~~~G~d~vitvDlHs~~~~~~F~~~~~~l~~~~~~~l~  173 (218)
                      +||++||+|+||||||||||++++|||+|+|++|+||+     ++|+|+|+|+|+|++++++||++|++|+  ++.+.++
T Consensus        78 ~~A~~i~~ViPY~~YsRQDr~~~~ge~isak~vA~lL~-----~~G~d~vitvDlH~~~i~~fF~ip~~nl--~a~~~~~  150 (159)
T d1dkua1          78 ASAKTINIVIPYYGYARQDRKARSREPITAKLFANLLE-----TAGATRVIALDLHAPQIQGFFDIPIDHL--MGVPILG  150 (159)
T ss_dssp             TTCSEEEEEESSCTTTTCCSCSSTTCCCHHHHHHHHHH-----HHTCCEEEEESCSSGGGGGGCSSCEEEE--CSHHHHH
T ss_pred             CCCCCEEEEECCCCHHHHCCCCCCCCCEEHHHHHHHHH-----HCCCCEEEEECCCCHHHCCCCCCCEECC--CCHHHHH
T ss_conf             57762078602121101012348998523999863676-----4187626885278588747789952000--1439999


Q ss_pred             HHHHHC
Q ss_conf             998409
Q 027833          174 QRLHQL  179 (218)
Q Consensus       174 ~~l~~~  179 (218)
                      +|+++.
T Consensus       151 ~~i~~~  156 (159)
T d1dkua1         151 EYFEGK  156 (159)
T ss_dssp             HHHHTT
T ss_pred             HHHHHC
T ss_conf             999973

>d1u9ya1 c.61.1.2 (A:1-155) Phosphoribosylpyrophosphate synthetase {Methanocaldococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: PRTase-like
superfamily: PRTase-like
family: Phosphoribosylpyrophosphate synthetase-like
domain: Phosphoribosylpyrophosphate synthetase
species: Methanocaldococcus jannaschii [TaxId: 2190]

Probab=100.00  E-value=0  Score=313.79  Aligned_cols=152  Identities=19%  Similarity=0.280  Sum_probs=147.3

Q ss_pred             EEEEECCCCHHHHHHHHHHCCCCCEEEEEEEECCCCCCEEEEEECCCCCCCEEEEEEECCCC-HHHHHHHHHHHHCCCCC
Q ss_conf             79995389499999999771997032016755199997268983588899849999732894-43999999997433179
Q 027833           17 VHLFYCVECEELARKVAAQSDLITLQSINWRNFADGWPNLYINSAHDIRGQHVAFLASFSSP-GVIFEQISVIYALPRLF   95 (218)
Q Consensus        17 ~~i~~g~s~~~la~~Ia~~l~~~~~~~~~~~~FpDG~~E~~v~i~~~v~G~dV~Iv~s~~~~-d~imELlll~~alr~~g   95 (218)
                      |+||+|+++++||++||+.| |.+++++++++||||  |.|+++.++++|++|+|+||++++ |++|||+++++|+|++|
T Consensus         1 m~i~~gs~~~~La~~ia~~l-g~~l~~~~~~~F~DG--E~~v~i~~~vrg~~vvvi~s~~~~~d~lmelll~~da~~~~~   77 (155)
T d1u9ya1           1 MIVVSGSQSQNLAFKVAKLL-NTKLTRVEYKRFPDN--EIYVRIVDEINDDEAVIINTQKNQNDAIVETILLCDALRDEG   77 (155)
T ss_dssp             CEEEECTTCHHHHHHHHHHT-TCCEECEEEEECTTC--CEEEEECSCCCSSEEEEECCCSSHHHHHHHHHHHHHHHHTTT
T ss_pred             CEEEECCCCHHHHHHHHHHH-CCCCEEEEEEECCCC--CCCEEECCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHC
T ss_conf             98998899799999999996-998540488876899--942653454578656887056665637889999999999847


Q ss_pred             CCEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCEEEEEECCCHHHHCCCCCCCCCCCCCCHHHHHHH
Q ss_conf             97699995058886542357899720199999987069999899997999837803210113544344444517999999
Q 027833           96 VASFTLVLPFFPTGSFERMEEEGDVATAFTMARILSNIPTSRGGPTSLVIYDIHALQERFYFSDHVLPLFETGIPLLKQR  175 (218)
Q Consensus        96 a~~ItlViPYl~YsRQDR~~~~ge~isak~va~lL~~~~~~~~G~d~vitvDlHs~~~~~~F~~~~~~l~~~~~~~l~~~  175 (218)
                      |++||+|+||||||||||++++|||+|+|++|++|+      +|+|+|+|+|+|++++++||++|++|+  ++.+.+++|
T Consensus        78 a~~I~~ViPY~~YaRQDr~~~~ge~iSak~va~ll~------~g~d~iitvDlH~~~i~~fF~ip~~nl--~a~~~l~~~  149 (155)
T d1u9ya1          78 VKKITLVAPYLAYARQDKKFNPGEAISIRALAKIYS------NIVDKLITINPHETHIKDFFTIPFIYG--DAVPKLAEY  149 (155)
T ss_dssp             CCEEEEECSSCTTCSCSSCSSTTBCCHHHHHHHHHH------HHCSEEEEESCSCGGGGGGCSSCEEEE--CCHHHHHHH
T ss_pred             CCCEEEECCCCHHHCCCCCCCCCCCCCHHHHHHHHH------HCCCCEEEEECCCHHHCCCCCCCEECC--CCHHHHHHH
T ss_conf             860478404303200331238997521899999986------402715997178578631479966503--227999999


Q ss_pred             HHHC
Q ss_conf             8409
Q 027833          176 LHQL  179 (218)
Q Consensus       176 l~~~  179 (218)
                      +++.
T Consensus       150 i~~~  153 (155)
T d1u9ya1         150 VKDK  153 (155)
T ss_dssp             HTTT
T ss_pred             HHHH
T ss_conf             9875

>d2c4ka1 c.61.1.2 (A:7-166) PRPP synthetase-associated protein 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: PRTase-like
superfamily: PRTase-like
family: Phosphoribosylpyrophosphate synthetase-like
domain: PRPP synthetase-associated protein 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=0  Score=300.30  Aligned_cols=152  Identities=21%  Similarity=0.352  Sum_probs=143.3

Q ss_pred             CEEEEECCCC---HHHHHHHHHHCCCCCEEEEEEEECCCCCCEEEEEECCCCCCCEEEEEEECCCC--HHHHHHHHHHHH
Q ss_conf             6799953894---99999999771997032016755199997268983588899849999732894--439999999974
Q 027833           16 QVHLFYCVEC---EELARKVAAQSDLITLQSINWRNFADGWPNLYINSAHDIRGQHVAFLASFSSP--GVIFEQISVIYA   90 (218)
Q Consensus        16 ~~~i~~g~s~---~~la~~Ia~~l~~~~~~~~~~~~FpDG~~E~~v~i~~~v~G~dV~Iv~s~~~~--d~imELlll~~a   90 (218)
                      ++.+|+|+++   ++||++||+.| |++++.+++++||||  |.|+++.+++||++|+|+||+++|  |++|||+++++|
T Consensus         1 ~~~vf~~~s~~~~~~LA~~ia~~L-g~~l~~~~~~~F~DG--E~~v~i~e~vrg~~V~ivqs~~~~~n~~lmeLll~~da   77 (160)
T d2c4ka1           1 GYRVFSANSTAACTELAKRITERL-GAELGKSVVYQETNG--ETRVEIKESVRGQDIFIIQTIPRDVNTAVMELLIMAYA   77 (160)
T ss_dssp             CCEEEECCCSTTTTHHHHHHHHHT-TCCCCCEEEEECTTS--CEEEEECSCCTTCCEEEECCCCSCHHHHHHHHHHHHHH
T ss_pred             CEEEEEEECCCCHHHHHHHHHHHH-CCCCCCEEEEECCCC--CEEECCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHH
T ss_conf             928998408967699999999996-997631288988999--84123476656882489951675307799999999999


Q ss_pred             CCCCCCCEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCEEEEEECCCHHHHCCCCCCCCCCCCCCHH
Q ss_conf             33179976999950588865423578997201999999870699998999979998378032101135443444445179
Q 027833           91 LPRLFVASFTLVLPFFPTGSFERMEEEGDVATAFTMARILSNIPTSRGGPTSLVIYDIHALQERFYFSDHVLPLFETGIP  170 (218)
Q Consensus        91 lr~~ga~~ItlViPYl~YsRQDR~~~~ge~isak~va~lL~~~~~~~~G~d~vitvDlHs~~~~~~F~~~~~~l~~~~~~  170 (218)
                      +|++||++||+|+||||||||||++.+|| ++++.++++|.     ++|+|+|+|+|+|++++++||++|++|+  ++.+
T Consensus        78 ~k~~~a~~It~ViPY~~YaRQDk~~~~g~-i~a~~va~~l~-----~~g~d~vitvDlH~~~i~~fF~ip~~nl--~a~~  149 (160)
T d2c4ka1          78 LKTACARNIIGVIPYFPYSKQSKMRKRGS-IVCKLLASMLA-----KAGLTHIITMDLHQKEIQGFFSFPVDNL--RASP  149 (160)
T ss_dssp             HHHTTCSCEEEEESSCTTTTTTSCCSSSC-CHHHHHHHHHH-----HTCCCEEEEESCSSGGGGGGCSSCEEEE--CCHH
T ss_pred             HHHHCCCCCEEECCCCHHHHCCCCCCCCC-CHHHHHHHHHH-----HCCCCEEEEECCCHHHHCCCCCCCEEEC--CCHH
T ss_conf             99847455344023441220543345777-01788876776-----5286437896168088767478943101--0429


Q ss_pred             HHHHHHHH
Q ss_conf             99999840
Q 027833          171 LLKQRLHQ  178 (218)
Q Consensus       171 ~l~~~l~~  178 (218)
                      .+++|+++
T Consensus       150 ~l~~~i~~  157 (160)
T d2c4ka1         150 FLLQYIQE  157 (160)
T ss_dssp             HHHHHHHH
T ss_pred             HHHHHHHH
T ss_conf             99999997

>d1u9ya2 c.61.1.2 (A:156-284) Phosphoribosylpyrophosphate synthetase {Methanocaldococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: PRTase-like
superfamily: PRTase-like
family: Phosphoribosylpyrophosphate synthetase-like
domain: Phosphoribosylpyrophosphate synthetase
species: Methanocaldococcus jannaschii [TaxId: 2190]

Probab=97.83  E-value=7.3e-05  Score=44.70  Aligned_cols=123  Identities=12%  Similarity=0.110  Sum_probs=87.5

Q ss_pred             CEEEEECCCCHHHHHHHHHHCCCCCEEEEEEEECCCCCCEEEEE-ECCCCCCCEEEEEEECCCC-HHHHHHHHHHHHCCC
Q ss_conf             67999538949999999977199703201675519999726898-3588899849999732894-439999999974331
Q 027833           16 QVHLFYCVECEELARKVAAQSDLITLQSINWRNFADGWPNLYIN-SAHDIRGQHVAFLASFSSP-GVIFEQISVIYALPR   93 (218)
Q Consensus        16 ~~~i~~g~s~~~la~~Ia~~l~~~~~~~~~~~~FpDG~~E~~v~-i~~~v~G~dV~Iv~s~~~~-d~imELlll~~alr~   93 (218)
                      ++++=+-.++...++.+|+.| +.++..+.-+|..++  |..+. +..++.|++++|+-.+.+. ..+   ...+.+|++
T Consensus         2 ~ViVsPD~G~~~~a~~~a~~l-~~~~a~~~K~R~~~~--~~~~~~~~gdv~gk~viIvDDii~TGgTl---~~aa~~Lk~   75 (129)
T d1u9ya2           2 PIVLAPDKGALEFAKTASKIL-NAEYDYLEKTRLSPT--EIQIAPKTLDAKDRDVFIVDDIISTGGTM---ATAVKLLKE   75 (129)
T ss_dssp             CEEEESSGGGHHHHHHHHHHH-TCCEEEBC------------CCBSSCCCTTCCEEEEEEECSSSHHH---HHHHHHHHH
T ss_pred             CEEEEECCCHHHHHHHHHHHC-CCCEEEEEEEECCCC--CCEEECCCCCCCCEEEEEECCHHCCCCCH---HHHHHHHHH
T ss_conf             899977824799999999973-999899986412466--30241012334320799974244065109---999999970


Q ss_pred             CCCCEEEEEE--ECCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCEEEEEECCCHHHHCCCCCCCCCCCCCCHHH
Q ss_conf             7997699995--05888654235789972019999998706999989999799983780321011354434444451799
Q 027833           94 LFVASFTLVL--PFFPTGSFERMEEEGDVATAFTMARILSNIPTSRGGPTSLVIYDIHALQERFYFSDHVLPLFETGIPL  171 (218)
Q Consensus        94 ~ga~~ItlVi--PYl~YsRQDR~~~~ge~isak~va~lL~~~~~~~~G~d~vitvDlHs~~~~~~F~~~~~~l~~~~~~~  171 (218)
                      .||++|.++.  |+|...               .+-++.+      ++++++++-|-+..        +..-+  +..++
T Consensus        76 ~GA~~V~~~~tHgifs~~---------------a~~~l~~------~~i~~iv~Tnti~~--------k~~~i--~va~l  124 (129)
T d1u9ya2          76 QGAKKIIAACVHPVLIGD---------------ALNKLYS------AGVEEVVGTDTYLS--------EVSKV--SVAEV  124 (129)
T ss_dssp             TTCCSEEEEEEECCCCTT---------------HHHHHHH------HTCSEEEEETTSCC--------TTEEE--CCHHH
T ss_pred             CCCCCEEEEEECCCCCHH---------------HHHHHHH------CCCCEEEECCCCCC--------CCCEE--EHHHH
T ss_conf             577635899754665938---------------9999984------89988999288899--------78586--85898


Q ss_pred             HHHH
Q ss_conf             9999
Q 027833          172 LKQR  175 (218)
Q Consensus       172 l~~~  175 (218)
                      +++.
T Consensus       125 la~a  128 (129)
T d1u9ya2         125 IVDL  128 (129)
T ss_dssp             HHTT
T ss_pred             HHHH
T ss_conf             9826

>d1dkua2 c.61.1.2 (A:167-315) Phosphoribosylpyrophosphate synthetase {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: PRTase-like
superfamily: PRTase-like
family: Phosphoribosylpyrophosphate synthetase-like
domain: Phosphoribosylpyrophosphate synthetase
species: Bacillus subtilis [TaxId: 1423]

Probab=97.55  E-value=0.00034  Score=40.96  Aligned_cols=133  Identities=17%  Similarity=0.097  Sum_probs=90.9

Q ss_pred             EEECCCCHHHHHHHHHHCCCCCEEEEEEEECCCCCCEEEE-EECCCCCCCEEEEEEECCCC-HHHHHHHHHHHHCCCCCC
Q ss_conf             9953894999999997719970320167551999972689-83588899849999732894-439999999974331799
Q 027833           19 LFYCVECEELARKVAAQSDLITLQSINWRNFADGWPNLYI-NSAHDIRGQHVAFLASFSSP-GVIFEQISVIYALPRLFV   96 (218)
Q Consensus        19 i~~g~s~~~la~~Ia~~l~~~~~~~~~~~~FpDG~~E~~v-~i~~~v~G~dV~Iv~s~~~~-d~imELlll~~alr~~ga   96 (218)
                      +=+-.++...++.+++.| +.++..++-++..++  +..+ .+..+|.|++++|+-.+.+. ..   +...+.+|++.||
T Consensus         5 VsPD~G~~kra~~~a~~l-~~~~a~~~K~r~~~~--~~~~~~~~GdV~gk~viIvDDmi~TGgT---l~~aa~~L~~~GA   78 (149)
T d1dkua2           5 VSPDHGGVTRARKLADRL-KAPIAIIDKRRPRPN--VAEVMNIVGNIEGKTAILIDDIIDTAGT---ITLAANALVENGA   78 (149)
T ss_dssp             EESSGGGHHHHHHHHHHT-TCCEEEEECC-----------CEEESCCTTCEEEEECSEESSCHH---HHHHHHHHHHTTC
T ss_pred             EEECCCHHHHHHHHHHHC-CCCEEEEEECCCCCC--EEEEEEEEEEECCCEEEEEHHHHHCHHH---HHHHHHHHHHHCC
T ss_conf             975822899999999981-999899971147999--0688760031079789987245546086---9999999997099


Q ss_pred             CEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCEEEEEECCCHHHHCCCCCCCCCCCCCCHHHHHHHH
Q ss_conf             76999950588865423578997201999999870699998999979998378032101135443444445179999998
Q 027833           97 ASFTLVLPFFPTGSFERMEEEGDVATAFTMARILSNIPTSRGGPTSLVIYDIHALQERFYFSDHVLPLFETGIPLLKQRL  176 (218)
Q Consensus        97 ~~ItlViPYl~YsRQDR~~~~ge~isak~va~lL~~~~~~~~G~d~vitvDlHs~~~~~~F~~~~~~l~~~~~~~l~~~l  176 (218)
                      ++|.++...-             .+|...+-++.+      .++++|++-|-........+ ..+..+  +..|+|++.+
T Consensus        79 ~~V~~~~THg-------------lfs~~a~~~l~~------~~i~~ivvTnTi~~~~~~~~-~ki~vi--~va~llA~aI  136 (149)
T d1dkua2          79 KEVYACCTHP-------------VLSGPAVERINN------STIKELVVTNSIKLPEEKKI-ERFKQL--SVGPLLAEAI  136 (149)
T ss_dssp             SEEEEECSEE-------------CCCTTHHHHHHT------SSEEEEEEETTSCC----CC-SSEEEE--CCHHHHHHHH
T ss_pred             CEEEEEEEEC-------------CCCCHHHHHHHC------CCCCEEEEECCCCCCHHHCC-CCCEEE--EHHHHHHHHH
T ss_conf             5599997303-------------348538888860------57766999488668212246-880898--7599999999


Q ss_pred             HHC
Q ss_conf             409
Q 027833          177 HQL  179 (218)
Q Consensus       177 ~~~  179 (218)
                      +..
T Consensus       137 ~~i  139 (149)
T d1dkua2         137 IRV  139 (149)
T ss_dssp             HHH
T ss_pred             HHH
T ss_conf             998

>d2c4ka2 c.61.1.2 (A:167-350) PRPP synthetase-associated protein 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: PRTase-like
superfamily: PRTase-like
family: Phosphoribosylpyrophosphate synthetase-like
domain: PRPP synthetase-associated protein 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.19  E-value=0.0022  Score=36.37  Aligned_cols=136  Identities=9%  Similarity=0.036  Sum_probs=83.8

Q ss_pred             EEEEECCCCHHHHHHHHHHCCCCCEEEEEEEECCCCCC-----------------------------EEEEEECCCCCCC
Q ss_conf             79995389499999999771997032016755199997-----------------------------2689835888998
Q 027833           17 VHLFYCVECEELARKVAAQSDLITLQSINWRNFADGWP-----------------------------NLYINSAHDIRGQ   67 (218)
Q Consensus        17 ~~i~~g~s~~~la~~Ia~~l~~~~~~~~~~~~FpDG~~-----------------------------E~~v~i~~~v~G~   67 (218)
                      +++-+-.+....|+.+|+.| +.++.-+.-.+.+.++.                             .....+..+|.|+
T Consensus         6 VVvsPd~Ggv~ra~~~A~~L-~~~~a~i~k~r~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~viGdVkGk   84 (184)
T d2c4ka2           6 VIVAKSPDAAKRAQSYAERL-RLGLAVIHGEAQCTELDMDDGRHSPPMVKNATVHPGLELPLMMAKEKPPITVVGDVGGR   84 (184)
T ss_dssp             EEEESSGGGHHHHHHHHHHH-TCEEEEEC---------------------------------------CCCCEESCCTTE
T ss_pred             EEEEECCCHHHHHHHHHHHH-CCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCC
T ss_conf             99987835699999999983-99989997540234434344545775423211122211232335640234788741698


Q ss_pred             EEEEEEECCCC-HHHHHHHHHHHHCCCCCCCEEEEEE--ECCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCEEE
Q ss_conf             49999732894-4399999999743317997699995--05888654235789972019999998706999989999799
Q 027833           68 HVAFLASFSSP-GVIFEQISVIYALPRLFVASFTLVL--PFFPTGSFERMEEEGDVATAFTMARILSNIPTSRGGPTSLV  144 (218)
Q Consensus        68 dV~Iv~s~~~~-d~imELlll~~alr~~ga~~ItlVi--PYl~YsRQDR~~~~ge~isak~va~lL~~~~~~~~G~d~vi  144 (218)
                      +|+|+-.+.+. ..+   ...+.+|++.||++|.++.  |.|..               ..+-++.+      .+++.++
T Consensus        85 ~vIIVDD~I~TG~T~---~~a~~~Lk~~GA~~v~~~~tH~~~~~---------------~a~~~l~~------~~i~~i~  140 (184)
T d2c4ka2          85 IAIIVDDIIDDVESF---VAAAEILKERGAYKIYVMATHGILSA---------------EAPRLIEE------SSVDEVV  140 (184)
T ss_dssp             EEEEECSEESSTHHH---HHHHHHHHTTTEEEEEEEEEEECCCT---------------THHHHHHH------SSCCEEE
T ss_pred             EEEEECCHHCCHHHH---HHHHHHHHHCCCCCCEEEEEEECCCC---------------HHHHHHHC------CCCCEEE
T ss_conf             899962133145779---99999997426555347887503176---------------17777524------7745799


Q ss_pred             EEECCCHHHHCCCCCCCCCCCCCCHHHHHHHHHHC
Q ss_conf             98378032101135443444445179999998409
Q 027833          145 IYDIHALQERFYFSDHVLPLFETGIPLLKQRLHQL  179 (218)
Q Consensus       145 tvDlHs~~~~~~F~~~~~~l~~~~~~~l~~~l~~~  179 (218)
                      +-|-........-...+..+  +..++|++.++..
T Consensus       141 ~tntip~~~~~~~~~kl~vl--sia~lla~aI~~i  173 (184)
T d2c4ka2         141 VTNTVPHEVQKLQCPKIKTV--DISLILSEAIRRI  173 (184)
T ss_dssp             EEBTSCCHHHHHHCTTEEEE--CCHHHHHHHHHHH
T ss_pred             EECCCCCCHHHCCCCCEEEE--EHHHHHHHHHHHH
T ss_conf             95673671665379985998--8899999999998

>d1hgxa_ c.61.1.1 (A:) Hypoxanthine-guanine-xanthine PRTase {Tritrichomonas foetus [TaxId: 5724]}

class: Alpha and beta proteins (a/b)
fold: PRTase-like
superfamily: PRTase-like
family: Phosphoribosyltransferases (PRTases)
domain: Hypoxanthine-guanine-xanthine PRTase
species: Tritrichomonas foetus [TaxId: 5724]

Probab=86.01  E-value=0.94  Score=21.66  Aligned_cols=93  Identities=16%  Similarity=0.139  Sum_probs=55.4

Q ss_pred             CCCEEEEECCCCHHHHHHHHHHCCCCCE--EEEEEEECC----CCCCEEEEEECCCCCCCEEEEEEECCCCHHHHHHHHH
Q ss_conf             9967999538949999999977199703--201675519----9997268983588899849999732894439999999
Q 027833           14 KKQVHLFYCVECEELARKVAAQSDLITL--QSINWRNFA----DGWPNLYINSAHDIRGQHVAFLASFSSPGVIFEQISV   87 (218)
Q Consensus        14 ~~~~~i~~g~s~~~la~~Ia~~l~~~~~--~~~~~~~Fp----DG~~E~~v~i~~~v~G~dV~Iv~s~~~~d~imELlll   87 (218)
                      +..++|=-.++...+|..+++++ +.+.  ..+....+.    .|+.+.......++.|++|+|+-...+....++  .+
T Consensus        32 ~~~vivgIl~GG~~fa~~L~~~l-~~~~~~~~~~~~~y~~~~~~~~~~i~~~~~~~~~gk~VLlVDDI~dtG~Tl~--~~  108 (173)
T d1hgxa_          32 KNPVMICVLTGAVFFYTDLLKHL-DFQLEPDYIICSSYSGTKSTGNLTISKDLKTNIEGRHVLVVEDIIDTGLTMY--QL  108 (173)
T ss_dssp             TCCEEEEETTTTHHHHHHHHTTC-CSCCEEEEEEEEC---------CEEEECCSSCCTTSEEEEEEEEESSSHHHH--HH
T ss_pred             CCCEEEEEECCCHHHHHHHHHHC-CCCCEEEEEEEEECCCCCCCCCEEEEECCCCCCCCCCEEEEEEEECHHHHHH--HH
T ss_conf             98489999168689999999755-9981367888886188643563256421564203420068866762207899--99


Q ss_pred             HHHCCCCCCCEE-EEEEECCCCC
Q ss_conf             974331799769-9995058886
Q 027833           88 IYALPRLFVASF-TLVLPFFPTG  109 (218)
Q Consensus        88 ~~alr~~ga~~I-tlViPYl~Ys  109 (218)
                      .+.+...++++| |+++=.=+.+
T Consensus       109 ~~~l~~~~p~~v~~avL~~K~~~  131 (173)
T d1hgxa_         109 LNNLQMRKPASLKVCTLCDKDIG  131 (173)
T ss_dssp             HHHHHTTCCSEEEEEEEEEECCS
T ss_pred             HHHHHHCCCCEEEEEEEEEECCC
T ss_conf             99998449871679888873555

>d1wd5a_ c.61.1.1 (A:) Putative phosphoribosyltransferase TT1426 (TTHA1462) {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: PRTase-like
superfamily: PRTase-like
family: Phosphoribosyltransferases (PRTases)
domain: Putative phosphoribosyltransferase TT1426 (TTHA1462)
species: Thermus thermophilus [TaxId: 274]

Probab=84.81  E-value=1.1  Score=21.33  Aligned_cols=114  Identities=11%  Similarity=0.046  Sum_probs=68.4

Q ss_pred             HCCCCCEEEEECCC-CHHHHHHHHHHCCCCCEEEEEEE--ECCCCCCE-----------EEE------------------
Q ss_conf             14799679995389-49999999977199703201675--51999972-----------689------------------
Q 027833           11 KSQKKQVHLFYCVE-CEELARKVAAQSDLITLQSINWR--NFADGWPN-----------LYI------------------   58 (218)
Q Consensus        11 ~~~~~~~~i~~g~s-~~~la~~Ia~~l~~~~~~~~~~~--~FpDG~~E-----------~~v------------------   58 (218)
                      ..+.++.++++-.. .-.+|..||+.| +.++.....+  .+|+- +|           ...                  
T Consensus        19 ~~~~~~~vVl~ip~ggv~~A~~iA~~L-~~p~d~~~~~~i~~p~~-~e~~~gavs~~~~~~~~~~~~~~~~~~~~~~~~~   96 (208)
T d1wd5a_          19 PLGLEAPVVLGLPRGGVVVADEVARRL-GGELDVVLVRKVGAPGN-PEFALGAVGEGGELVLMPYALRYADQSYLEREAA   96 (208)
T ss_dssp             GGCCCSCEEEECTTHHHHHHHHHHHHH-TCEEEECCEEEEEETTE-EEEEEEEEETTCCEEECTTHHHHSCHHHHHHHHH
T ss_pred             HCCCCCCEEEECCCCCHHHHHHHHHHC-CCCCEEEEEEECCCCCC-HHHHHCEEECCCCEEECHHHHHHCCCHHHHHHHH
T ss_conf             718998799837988589999999982-99702677750237874-4454320504797673448876427104436788


Q ss_pred             ----------------EECCCCCCCEEEEEEECCCCHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCH
Q ss_conf             ----------------8358889984999973289443999999997433179976999950588865423578997201
Q 027833           59 ----------------NSAHDIRGQHVAFLASFSSPGVIFEQISVIYALPRLFVASFTLVLPFFPTGSFERMEEEGDVAT  122 (218)
Q Consensus        59 ----------------~i~~~v~G~dV~Iv~s~~~~d~imELlll~~alr~~ga~~ItlViPYl~YsRQDR~~~~ge~is  122 (218)
                                      +...++.|++|+||-.+-.....  +.-.+.+|++.||++|++..|-++               
T Consensus        97 ~~~~~~~~~~~~~~~~~~~~~v~gk~ViLVDD~I~TG~T--~~aa~~~L~~~ga~~V~~a~~v~~---------------  159 (208)
T d1wd5a_          97 RQRDVLRKRAERYRRVRPKAARKGRDVVLVDDGVATGAS--MEAALSVVFQEGPRRVVVAVPVAS---------------  159 (208)
T ss_dssp             HHHHHHHHHHHHHHHHSCCCCCTTSEEEEECSCBSSCHH--HHHHHHHHHTTCCSEEEEEEEEBC---------------
T ss_pred             HHHHHHHHHCCEEECCCCCCCCCCCEEEEECCHHHHHHH--HHHHHHHHHHCCCCEEEEEECCCC---------------
T ss_conf             899999864154332478734589889997040013578--999999999569988999603478---------------


Q ss_pred             HHHHHHHHHCCCCCCCCCCEEEEEECCCH
Q ss_conf             99999987069999899997999837803
Q 027833          123 AFTMARILSNIPTSRGGPTSLVIYDIHAL  151 (218)
Q Consensus       123 ak~va~lL~~~~~~~~G~d~vitvDlHs~  151 (218)
                       +-..+.|+      ..+| ++.+....+
T Consensus       160 -~~~~~~l~------~~~d-~v~~~~p~~  180 (208)
T d1wd5a_         160 -PEAVERLK------ARAE-VVALSVPQD  180 (208)
T ss_dssp             -HHHHHHHH------TTSE-EEEEECCTT
T ss_pred             -HHHHHHHC------CCCC-EEEECCCCH
T ss_conf             -37887623------4798-899888821