Citrus Sinensis ID: 027858


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------
MGFGSHVLLFWLFQFVLLSSMLLKEAEAEQHLYNVTSLRGRKQVSGCNLFQGRWVIDPSYPLYDSSSCPFIDAEFDCLKYGRPDKQYLKYSWQPASCAVPRFDGGDFLRRYRGKRIMFVGDSLSLNMWESLSCMIHASVPNAKTSFVRKETLSSVSFEEYGVTLLLYRTPYLVDIVKQKVGRVLTLNSIQAGKFWKDMDVLIFNSWHWWTHTGKAQP
ccccHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccEEccEEEccccccccccccccccccccccccccccccccEEEEEccccccccccHHHHHHHccccEEEEEEcccHHHHHHHHHHHHHccccccccccccccccEEEEEEEccEEEEEEEccccccEEEcccccEEEEcccccccccccccEEEEcccccccccccccc
cccHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccEEEEccccccccccccccccccccccHcccccHHHcEEEEcccccccccccHHHHHHHHcccEEEEEcccccccHHHHHHHHHHHHcccccEEEEEcccEEEEEEEcccEEEEEEEccEEEEEcccccccEEEEcccccccccccccEEEEEcEEEEcccccccc
MGFGSHVLLFWLFQFVLLSSMLLKEAEAEQHLYNVTslrgrkqvsgcnlfqgrwvidpsyplydssscpfidaefdclkygrpdkqylkyswqpascavprfdggdflrryrgkrimfvgdSLSLNMWESLSCMIhasvpnaktsfvrketlssvsfEEYGVTLLLYRTPYLVDIVKQKVGRVLTLNsiqagkfwkDMDVLIFNSWHwwthtgkaqp
MGFGSHVLLFWLFQFVLLSSMLLKEAEAEQHLYnvtslrgrkqVSGCNLFQGRWVIDPSYPLYDSSSCPFIDAEFDCLKYGRPDKqylkyswqpascavprFDGGDFLRRYRGKRIMFVGDSLSLNMWESLSCMIHASVPNAKTSFVRKETLSSVSFEEYGVTLLLYRTPYLVDIVKQKVGRVLTLNSIQAGKFWKDMDVLIFNSWHWWthtgkaqp
MGFGSHvllfwlfqfvllSSMLLKEAEAEQHLYNVTSLRGRKQVSGCNLFQGRWVIDPSYPLYDSSSCPFIDAEFDCLKYGRPDKQYLKYSWQPASCAVPRFDGGDFLRRYRGKRIMFVGDSLSLNMWESLSCMIHASVPNAKTSFVRKETLSSVSFEEYGVTLLLYRTPYLVDIVKQKVGRVLTLNSIQAGKFWKDMDVLIFNSWHWWTHTGKAQP
***GSHVLLFWLFQFVLLSSMLLKEAEAEQHLYNVTSLRGRKQVSGCNLFQGRWVIDPSYPLYDSSSCPFIDAEFDCLKYGRPDKQYLKYSWQPASCAVPRFDGGDFLRRYRGKRIMFVGDSLSLNMWESLSCMIHASVPNAKTSFVRKETLSSVSFEEYGVTLLLYRTPYLVDIVKQKVGRVLTLNSIQAGKFWKDMDVLIFNSWHWWTHT*****
*GFGSHVLLFWLFQFVLLSSML**************************LFQGRWVIDPSYPLYDSSSCPFIDAEFDCLKYGRPDKQYLKYSWQPASCAVPRFDGGDFLRRYRGKRIMFVGDSLSLNMWESLSCMIHASVPNAKTSFVRKETLSSVSFEEYGVTLLLYRTPYLVDIVKQKVGRVLTLNSIQAGKFWKDMDVLIFNSWHWWTHTG****
MGFGSHVLLFWLFQFVLLSSMLLKEAEAEQHLYNVTSLRGRKQVSGCNLFQGRWVIDPSYPLYDSSSCPFIDAEFDCLKYGRPDKQYLKYSWQPASCAVPRFDGGDFLRRYRGKRIMFVGDSLSLNMWESLSCMIHASVPNAKTSFVRKETLSSVSFEEYGVTLLLYRTPYLVDIVKQKVGRVLTLNSIQAGKFWKDMDVLIFNSWHWWTHTGKAQP
MGFGSHVLLFWLFQFVLLSSMLLKEAE*****************SGCNLFQGRWVIDPSYPLYDSSSCPFIDAEFDCLKYGRPDKQYLKYSWQPASCAVPRFDGGDFLRRYRGKRIMFVGDSLSLNMWESLSCMIHASVPNAKTSFVRKETLSSVSFEEYGVTLLLYRTPYLVDIVKQKVGRVLTLNSIQAGKFWKDMDVLIFNSWHWWTHT*****
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
SSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHooooo
SSSSSSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
MGFGSHVLLFWLFQFVLLSSMLLKEAEAEQHLYNVTSLRGRKQVSGCNLFQGRWVIDPSYPLYDSSSCPFIDAEFDCLKYGRPDKQYLKYSWQPASCAVPRFDGGDFLRRYRGKRIMFVGDSLSLNMWESLSCMIHASVPNAKTSFVRKETLSSVSFEEYGVTLLLYRTPYLVDIVKQKVGRVLTLNSIQAGKFWKDMDVLIFNSWHWWTHTGKAQP
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query217
255563106 370 conserved hypothetical protein [Ricinus 0.995 0.583 0.699 7e-86
224114702 362 predicted protein [Populus trichocarpa] 0.981 0.588 0.685 1e-85
356521442 368 PREDICTED: uncharacterized protein LOC10 0.967 0.570 0.685 2e-84
356555410 375 PREDICTED: uncharacterized protein LOC10 0.880 0.509 0.737 2e-82
147767568 367 hypothetical protein VITISV_036403 [Viti 0.889 0.525 0.715 1e-81
297740486 377 unnamed protein product [Vitis vinifera] 0.889 0.511 0.715 1e-81
225443831 409 PREDICTED: uncharacterized protein LOC10 0.889 0.471 0.715 2e-81
297851330 380 hypothetical protein ARALYDRAFT_473111 [ 0.834 0.476 0.75 2e-81
356500127 371 PREDICTED: uncharacterized protein LOC10 0.958 0.560 0.684 2e-81
357446949 360 hypothetical protein MTR_2g015720 [Medic 0.958 0.577 0.683 2e-81
>gi|255563106|ref|XP_002522557.1| conserved hypothetical protein [Ricinus communis] gi|223538248|gb|EEF39857.1| conserved hypothetical protein [Ricinus communis] Back     alignment and taxonomy information
 Score =  322 bits (825), Expect = 7e-86,   Method: Compositional matrix adjust.
 Identities = 156/223 (69%), Positives = 184/223 (82%), Gaps = 7/223 (3%)

Query: 1   MGFGS----HVLLFWLFQFVLLSSMLLKEAEAEQHLYNVTSL-RGRKQVSG-CNLFQGRW 54
           MGF S     VL+    Q VLL +  L+E  A+QH YNVT L +GRKQVS  CNLFQG+W
Sbjct: 1   MGFSSKSRCQVLVSLFSQLVLLFT-FLQETTAQQHYYNVTRLLKGRKQVSSTCNLFQGKW 59

Query: 55  VIDPSYPLYDSSSCPFIDAEFDCLKYGRPDKQYLKYSWQPASCAVPRFDGGDFLRRYRGK 114
           V+DP+YPLYD+S CPFID EF+C K+GRPD QYLKYSWQP SC VPRF+G DFLRR+RGK
Sbjct: 60  VVDPAYPLYDASGCPFIDPEFNCQKFGRPDTQYLKYSWQPDSCNVPRFNGVDFLRRWRGK 119

Query: 115 RIMFVGDSLSLNMWESLSCMIHASVPNAKTSFVRKETLSSVSFEEYGVTLLLYRTPYLVD 174
           +IMFVGDSLSLNMWESLSCMIHASVPNAKTS V +++L SV+F+EY VTL ++RTPYLVD
Sbjct: 120 KIMFVGDSLSLNMWESLSCMIHASVPNAKTSSVDRDSLHSVTFDEYDVTLYMFRTPYLVD 179

Query: 175 IVKQKVGRVLTLNSIQAGKFWKDMDVLIFNSWHWWTHTGKAQP 217
           IV++ VGRVL L+SI+ G  WK MD+LIFNSWHWWTHTG++QP
Sbjct: 180 IVRESVGRVLRLDSIEGGNAWKGMDLLIFNSWHWWTHTGRSQP 222




Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224114702|ref|XP_002316834.1| predicted protein [Populus trichocarpa] gi|222859899|gb|EEE97446.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|356521442|ref|XP_003529365.1| PREDICTED: uncharacterized protein LOC100803167 [Glycine max] Back     alignment and taxonomy information
>gi|356555410|ref|XP_003546025.1| PREDICTED: uncharacterized protein LOC100818476 [Glycine max] Back     alignment and taxonomy information
>gi|147767568|emb|CAN60202.1| hypothetical protein VITISV_036403 [Vitis vinifera] Back     alignment and taxonomy information
>gi|297740486|emb|CBI30668.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|225443831|ref|XP_002274664.1| PREDICTED: uncharacterized protein LOC100258410 [Vitis vinifera] Back     alignment and taxonomy information
>gi|297851330|ref|XP_002893546.1| hypothetical protein ARALYDRAFT_473111 [Arabidopsis lyrata subsp. lyrata] gi|297339388|gb|EFH69805.1| hypothetical protein ARALYDRAFT_473111 [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|356500127|ref|XP_003518885.1| PREDICTED: uncharacterized protein LOC100820311 [Glycine max] Back     alignment and taxonomy information
>gi|357446949|ref|XP_003593750.1| hypothetical protein MTR_2g015720 [Medicago truncatula] gi|355482798|gb|AES64001.1| hypothetical protein MTR_2g015720 [Medicago truncatula] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query217
TAIR|locus:2029959 380 TBL38 "AT1G29050" [Arabidopsis 0.834 0.476 0.744 2.3e-78
TAIR|locus:2055425 385 TBL37 "AT2G34070" [Arabidopsis 0.811 0.457 0.745 1e-75
TAIR|locus:2041574 367 TBL39 "AT2G42570" [Arabidopsis 0.815 0.482 0.646 3.7e-64
TAIR|locus:2055878 364 AT2G31110 "AT2G31110" [Arabido 0.861 0.513 0.596 7.9e-62
TAIR|locus:2099402 356 TBL41 "TRICHOME BIREFRINGENCE- 0.792 0.483 0.575 1.4e-55
TAIR|locus:2037498 359 TBL42 "TRICHOME BIREFRINGENCE- 0.806 0.487 0.536 7.2e-52
TAIR|locus:2178813 402 PMR5 "AT5G58600" [Arabidopsis 0.792 0.427 0.505 4.8e-46
TAIR|locus:2045688 398 TBL45 "AT2G30010" [Arabidopsis 0.778 0.424 0.502 8.1e-44
TAIR|locus:2182157 464 TBL11 "TRICHOME BIREFRINGENCE- 0.764 0.357 0.412 3.1e-35
TAIR|locus:2155874 457 TBL4 "AT5G49340" [Arabidopsis 0.783 0.371 0.389 8.3e-35
TAIR|locus:2029959 TBL38 "AT1G29050" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 788 (282.4 bits), Expect = 2.3e-78, P = 2.3e-78
 Identities = 137/184 (74%), Positives = 162/184 (88%)

Query:    36 TSLRGRKQ--VSGCNLFQGRWVIDPSYPLYDSSSCPFIDAEFDCLKYGRPDKQYLKYSWQ 93
             +SLRG+KQ   SGCNLFQGRWV D SYP YDSS CPFID EFDCLK+GRPDKQ+LKYSWQ
Sbjct:    48 SSLRGKKQRRASGCNLFQGRWVFDASYPFYDSSKCPFIDGEFDCLKFGRPDKQFLKYSWQ 107

Query:    94 PASCAVPRFDGGDFLRRYRGKRIMFVGDSLSLNMWESLSCMIHASVPNAKTSFVRKETLS 153
             P SC +PRFDGG FLR+YRGKR+MFVGDSLSLNMWESL+CMIHASVPNAKT+F+++  LS
Sbjct:   108 PESCTIPRFDGGAFLRKYRGKRVMFVGDSLSLNMWESLACMIHASVPNAKTTFLKRTPLS 167

Query:   154 SVSFEEYGVTLLLYRTPYLVDIVKQKVGRVLTLNSIQAGK-FWKDMDVLIFNSWHWWTHT 212
             +++F+EYGVTL LYRTPY+VDI K++VGRVL L +I+ G   WK+MDVL+FNSWHWWTH 
Sbjct:   168 TLTFQEYGVTLYLYRTPYIVDISKERVGRVLNLGAIEGGADAWKNMDVLVFNSWHWWTHK 227

Query:   213 GKAQ 216
             G++Q
Sbjct:   228 GQSQ 231




GO:0008150 "biological_process" evidence=ND
TAIR|locus:2055425 TBL37 "AT2G34070" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2041574 TBL39 "AT2G42570" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2055878 AT2G31110 "AT2G31110" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2099402 TBL41 "TRICHOME BIREFRINGENCE-LIKE 41" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2037498 TBL42 "TRICHOME BIREFRINGENCE-LIKE 42" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2178813 PMR5 "AT5G58600" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2045688 TBL45 "AT2G30010" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2182157 TBL11 "TRICHOME BIREFRINGENCE-LIKE 11" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2155874 TBL4 "AT5G49340" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Your Input:
eugene3.00110748
hypothetical protein (362 aa)
(Populus trichocarpa)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query217
PLN02629 387 PLN02629, PLN02629, powdery mildew resistance 5 9e-69
pfam13839 270 pfam13839, PC-Esterase, GDSL/SGNH-like Acyl-Estera 4e-41
pfam1441655 pfam14416, PMR5N, PMR5 N terminal Domain 3e-27
>gnl|CDD|215338 PLN02629, PLN02629, powdery mildew resistance 5 Back     alignment and domain information
 Score =  215 bits (548), Expect = 9e-69
 Identities = 94/174 (54%), Positives = 116/174 (66%), Gaps = 2/174 (1%)

Query: 45  SGCNLFQGRWVIDPSYPLYDSSSCP-FIDAEFDCLKYGRPDKQYLKYSWQPASCAVPRFD 103
           S C LF G WV D SYPLY SS CP  ID EF+C  YGRPD  YLKY WQP +C +PRF+
Sbjct: 51  STCALFVGTWVRDDSYPLYQSSDCPGVIDPEFNCQMYGRPDSDYLKYRWQPLNCELPRFN 110

Query: 104 GGDFLRRYRGKRIMFVGDSLSLNMWESLSCMIHASVPNAKTSFVRKETLSSVSFEEYGVT 163
           G +FL + +GK +MFVGDSL  N WESL C+I +SVP+ +T   R + LS+  F +YGV+
Sbjct: 111 GLEFLLKMKGKTVMFVGDSLGRNQWESLICLISSSVPSTRTQMSRGDPLSTFKFLDYGVS 170

Query: 164 LLLYRTPYLVDIVKQKVGRVLTLNSIQA-GKFWKDMDVLIFNSWHWWTHTGKAQ 216
           +  Y+ PYLVDI   +  RVL L  I      W+D DVLIFN+ HWW+H G  Q
Sbjct: 171 ISFYKAPYLVDIDAVQGKRVLKLEEISGNANAWRDADVLIFNTGHWWSHQGSLQ 224


Length = 387

>gnl|CDD|222410 pfam13839, PC-Esterase, GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p Back     alignment and domain information
>gnl|CDD|206583 pfam14416, PMR5N, PMR5 N terminal Domain Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 217
PLN02629 387 powdery mildew resistance 5 100.0
PF1441655 PMR5N: PMR5 N terminal Domain 99.96
PF13839 263 PC-Esterase: GDSL/SGNH-like Acyl-Esterase family f 99.91
cd01842183 SGNH_hydrolase_like_5 SGNH_hydrolase subfamily. SG 96.45
cd01834191 SGNH_hydrolase_like_2 SGNH_hydrolase subfamily. SG 80.52
>PLN02629 powdery mildew resistance 5 Back     alignment and domain information
Probab=100.00  E-value=7.8e-72  Score=516.44  Aligned_cols=175  Identities=54%  Similarity=1.078  Sum_probs=163.5

Q ss_pred             CCCCCCcCcccceeeCCCCCCCCCCCCC-CccCccccccCCCCCCcccceeeecCCCCCCCCChHHHHHHhcCCcEEEec
Q 027858           42 KQVSGCNLFQGRWVIDPSYPLYDSSSCP-FIDAEFDCLKYGRPDKQYLKYSWQPASCAVPRFDGGDFLRRYRGKRIMFVG  120 (217)
Q Consensus        42 ~~~~~Cd~~~G~WV~d~~~PlY~~~~Cp-~i~~~~~C~~nGRpd~~yl~WrWqP~~C~l~rfd~~~fL~~lrgKrl~FVG  120 (217)
                      ...++||+|+|+||+|+++|+|++++|| ||++++||++|||||++|++|||||++|+||||||.+|||+||||||||||
T Consensus        48 ~~~~~CD~f~G~WV~D~s~PlY~~~~Cp~fi~~~~nC~knGRPD~~Yl~WRWqP~gC~LPRFda~~fLe~~RgKrl~FVG  127 (387)
T PLN02629         48 ANQSTCALFVGTWVRDDSYPLYQSSDCPGVIDPEFNCQMYGRPDSDYLKYRWQPLNCELPRFNGLEFLLKMKGKTVMFVG  127 (387)
T ss_pred             CCccccCCCCCeEecCCCCCCCCCCCCccccccccchhhcCCCCcchhhccccCCCCCCCCcCHHHHHHHhcCCeEEEec
Confidence            5567899999999999999999999999 999999999999999999999999999999999999999999999999999


Q ss_pred             chhhHHHHHHHHHhhcccCCCCeeeeeecCcceEEEEeecceEEEEEEccccccceeccccceEEeccccc-CCCCCCCc
Q 027858          121 DSLSLNMWESLSCMIHASVPNAKTSFVRKETLSSVSFEEYGVTLLLYRTPYLVDIVKQKVGRVLTLNSIQA-GKFWKDMD  199 (217)
Q Consensus       121 DSl~Rnq~~SLlClL~~~~p~~~~~~~~~~~~~~~~f~~yn~Tv~f~WsPfLV~~~~~~~~~~L~lD~~~~-~~~w~~~D  199 (217)
                      |||+|||||||+|||++++|..++...++++..+|+|++||+||+||||||||+.++....++|+||+++. +++|+++|
T Consensus       128 DSL~RNQ~eSLvClL~~~~p~~~~~~~~~~~~~~~~F~~yN~TV~~ywspfLV~~~~~~~~~~l~LD~id~~a~~w~~~D  207 (387)
T PLN02629        128 DSLGRNQWESLICLISSSVPSTRTQMSRGDPLSTFKFLDYGVSISFYKAPYLVDIDAVQGKRVLKLEEISGNANAWRDAD  207 (387)
T ss_pred             cccchhHHHHHHHHhhccCCCCceeeecCCceEEEEeccCCEEEEEEecceEEeeecCCCceeEEecCcchhhhhhccCC
Confidence            99999999999999999998766555567788999999999999999999999988766667999999987 89999999


Q ss_pred             EEEEcccccccCCCCCC
Q 027858          200 VLIFNSWHWWTHTGKAQ  216 (217)
Q Consensus       200 vLV~ntGhWw~~~~~~~  216 (217)
                      ||||||||||.|++..+
T Consensus       208 vlVfntghWw~~~~~~~  224 (387)
T PLN02629        208 VLIFNTGHWWSHQGSLQ  224 (387)
T ss_pred             EEEEeCccccCCCCeeE
Confidence            99999999999987653



>PF14416 PMR5N: PMR5 N terminal Domain Back     alignment and domain information
>PF13839 PC-Esterase: GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p Back     alignment and domain information
>cd01842 SGNH_hydrolase_like_5 SGNH_hydrolase subfamily Back     alignment and domain information
>cd01834 SGNH_hydrolase_like_2 SGNH_hydrolase subfamily Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

No hit with e-value below 0.005

Structure Templates Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query217
4hf7_A209 Putative acylhydrolase; PF13472 family, structural 83.72
3hp4_A185 GDSL-esterase; psychrotrophic, monoethylphosphonat 80.98
>4hf7_A Putative acylhydrolase; PF13472 family, structural genomics, joint center for struct genomics, JCSG, protein structure initiative; HET: OSE; 1.77A {Bacteroides thetaiotaomicron} Back     alignment and structure
Probab=83.72  E-value=0.4  Score=38.33  Aligned_cols=15  Identities=27%  Similarity=0.764  Sum_probs=13.1

Q ss_pred             cCCcEEEecchhhHH
Q 027858          112 RGKRIMFVGDSLSLN  126 (217)
Q Consensus       112 rgKrl~FVGDSl~Rn  126 (217)
                      .+++|+|+|||+++.
T Consensus        25 ~~~~Iv~~GDSit~g   39 (209)
T 4hf7_A           25 KEKRVVFMGNXITEG   39 (209)
T ss_dssp             GGCCEEEEESHHHHH
T ss_pred             CCCeEEEECcHHHhC
Confidence            567899999999985



>3hp4_A GDSL-esterase; psychrotrophic, monoethylphosphonate, hydrolase; HET: MIR; 1.35A {Pseudoalteromonas SP} SCOP: c.23.10.0 Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query217
d3bzwa1 248 Uncharacterized protein BT2961 {Bacteroides thetai 91.69
d3dc7a1207 Uncharacterized protein Lp3323 {Lactobacillus plan 89.34
d1pvva2163 Ornithine transcarbamoylase {Archaeon Pyrococcus f 89.14
d1otha2170 Ornithine transcarbamoylase {Human (Homo sapiens) 87.11
d1dxha2185 Ornithine transcarbamoylase {Pseudomonas aeruginos 80.86
d1vjga_201 Hypothetical protein alr1529 {Nostoc sp. pcc 7120 80.36
>d3bzwa1 c.23.10.9 (A:38-285) Uncharacterized protein BT2961 {Bacteroides thetaiotaomicron [TaxId: 818]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: SGNH hydrolase
family: BT2961-like
domain: Uncharacterized protein BT2961
species: Bacteroides thetaiotaomicron [TaxId: 818]
Probab=91.69  E-value=0.025  Score=41.49  Aligned_cols=16  Identities=31%  Similarity=0.808  Sum_probs=13.5

Q ss_pred             hcCCcEEEecchhhHH
Q 027858          111 YRGKRIMFVGDSLSLN  126 (217)
Q Consensus       111 lrgKrl~FVGDSl~Rn  126 (217)
                      ..||||+|+|||++-.
T Consensus         6 ~~~kkI~~~GDS~T~g   21 (248)
T d3bzwa1           6 WQGKKVGYIGDSITDP   21 (248)
T ss_dssp             TTTCEEEEEESTTTCT
T ss_pred             CCCCEEEEEehHHccC
Confidence            3699999999999753



>d3dc7a1 c.23.10.9 (A:18-224) Uncharacterized protein Lp3323 {Lactobacillus plantarum [TaxId: 1590]} Back     information, alignment and structure
>d1pvva2 c.78.1.1 (A:151-313) Ornithine transcarbamoylase {Archaeon Pyrococcus furiosus [TaxId: 2261]} Back     information, alignment and structure
>d1otha2 c.78.1.1 (A:185-354) Ornithine transcarbamoylase {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1dxha2 c.78.1.1 (A:151-335) Ornithine transcarbamoylase {Pseudomonas aeruginosa [TaxId: 287]} Back     information, alignment and structure
>d1vjga_ c.23.10.6 (A:) Hypothetical protein alr1529 {Nostoc sp. pcc 7120 [TaxId: 103690]} Back     information, alignment and structure