Citrus Sinensis ID: 027921

---

Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------
Protein Sequence
MLKLWKWYQNCLAVHPLKTQVISSGFLWGVGDIAAQYITHATAKSRLQLSDADEKFKVNWKRVAVTSSFGFGFVGPVGHFWYEGLDRFIRLKLQLPPKSARFVATKVAMDSIIFGPLDLFVFFTYMGFSTGKNVAQVKEDLKRDFLPALVLEGGIWPIVQVANFRYVPVRYQLLYVNIFCLLDSAFLSWVEQQKDAAWKQWFTSFHSLEERGGKGGL
Secondary Structure (PSIPRED)
cHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHccccccccccccHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHcccccHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHccccHHHHHHHcccccHHHccccccc
Secondary Structure Prediction (SSPRO)
cHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHcccEccHHHEEEEEEccHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHcHccccHHHccccccc
Coil and Loop (DISEMBL)
MLKLWKWYQNclavhplktqvissgflwgvGDIAAQYITHATAKsrlqlsdadekfKVNWKRVAVTssfgfgfvgpvghfWYEGLDRFIRLklqlppksarFVATKVAmdsiifgplDLFVFFTYmgfstgknVAQVKEDLKrdflpalvleggiwpivqvanfryvpVRYQLLYVNIFCLLDSAFLSWVEQQKDAAWKQWFTSFHSLEERGGKGGL
Flexible Loop (DISEMBL)
MLKLWKWYQNCLAVHPLKTQVISSGFLWGVGDIAAQYITHATAKSRLQLSDADEKFKVNWKRVAVTSSFGFGFVGPVGHFWYEGLDRFIRLKLQLPPKSARFVATKVAMDSIIFGPLDLFVFFTYMGFSTGKNVAQVKEDLKRDFLPALVLEGGIWPIVQVANFRYVPVRYQLLYVNIFCLLDSAFLSWVEQQKDAAWKQWFTSFHsleerggkggl
Low Complexity Region (SEG)
MLKLWKWYQNCLAVHPLKTQVISSGFLWGVGDIAAQYITHATAKSRLQLSDADEKFKVNWKRvavtssfgfgfvgpvghfWYEGLDRFIRLKLQLPPKSARFVATKVAMDSIIFGPLDLFVFFTYMGFSTGKNVAQVKEDLKRDFLPALVLEGGIWPIVQVANFRYVPVRYQLLYVNIFCLLDSAFLSWVEQQKDAAWKQWFTSFHSLEERGGKGGL
Disordered region (IsUnstruct)
**KLWKWYQNCLAVHPLKTQVISSGFLWGVGDIAAQYITHATAKSRLQLSDADEKFKVNWKRVAVTSSFGFGFVGPVGHFWYEGLDRFIRLKLQLPPKSARFVATKVAMDSIIFGPLDLFVFFTYMGFSTGKNVAQVKEDLKRDFLPALVLEGGIWPIVQVANFRYVPVRYQLLYVNIFCLLDSAFLSWVEQQKDAAWKQWFTSFH***********
Disordered Region (DISOPRED)
MLKLWKWYQNCLAVHPLKTQVISSGFLWGVGDIAAQYITH*************EKFKVNWKRVAVTSSFGFGFVGPVGHFWYEGLDRFIRLKLQLPPKSARFVATKVAMDSIIFGPLDLFVFFTYMGFSTGKNVAQVKEDLKRDFLPALVLEGGIWPIVQVANFRYVPVRYQLLYVNIFCLLDSAFLS*****************************
Disordered Region (DISEMBL)
MLKLWKWYQNCLAVHPLKTQVISSGFLWGVGDIAAQYITHATAKSRLQLSDADEKFKVNWKRVAVTSSFGFGFVGPVGHFWYEGLDRFIRLKLQLPPKSARFVATKVAMDSIIFGPLDLFVFFTYMGFSTGKNVAQVKEDLKRDFLPALVLEGGIWPIVQVANFRYVPVRYQLLYVNIFCLLDSAFLSWVEQQKDAAWKQWFTSFHSLE********
Disordered Region (DISPRO)
MLKLWKWYQNCLAVHPLKTQVISSGFLWGVGDIAAQYITHATA***********KFKVNWKRVAVTSSFGFGFVGPVGHFWYEGLDRFIRLKLQLPPKSARFVATKVAMDSIIFGPLDLFVFFTYMGFSTGKNVAQVKEDLKRDFLPALVLEGGIWPIVQVANFRYVPVRYQLLYVNIFCLLDSAFLSWVEQQKDAAWKQWFTSFHS**********
Transmembrane Helix (TMHMM)
iiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MLKLWKWYQNCLAVHPLKTQVISSGFLWGVGDIAAQYITHATAKSRLQLSDADEKFKVNWKRVAVTSSFGFGFVGPVGHFWYEGLDRFIRLKLQLPPKSARFVATKVAMDSIIFGPLDLFVFFTYMGFSTGKNVAQVKEDLKRDFLPALVLEGGIWPIVQVANFRYVPVRYQLLYVNIFCLLDSAFLSWVEQQKDAAWKQWFTSFHSLEERGGKGGL
Positional Conservation
no confident homologs detected

---

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	217	2.2.26 [Sep-21-2011]
Q54XX9	193	PXMP2/4 family protein 2	yes	no	0.838	0.943	0.323	3e-24
Q5TZ51	177	Protein Mpv17 OS=Danio re	yes	no	0.792	0.971	0.349	2e-21
P19258	176	Protein Mpv17 OS=Mus musc	yes	no	0.806	0.994	0.343	2e-21
Q66GV0	177	Protein Mpv17 OS=Xenopus	N/A	no	0.788	0.966	0.347	3e-21
Q5BK62	176	Protein Mpv17 OS=Rattus n	yes	no	0.806	0.994	0.333	4e-21
P39210	176	Protein Mpv17 OS=Homo sap	yes	no	0.788	0.971	0.340	8e-21
Q2KIN6	176	Protein Mpv17 OS=Bos taur	yes	no	0.788	0.971	0.340	1e-20
Q4IPX8	175	Protein SYM1 OS=Gibberell	yes	no	0.783	0.971	0.329	9e-20
Q7SCY7	172	Protein sym-1 OS=Neurospo	N/A	no	0.783	0.988	0.303	2e-19
Q54FR4	185	PXMP2/4 family protein 4	no	no	0.755	0.886	0.307	1e-18

>sp|Q54XX9|PX24B_DICDI PXMP2/4 family protein 2 OS=Dictyostelium discoideum GN=DDB_G0278529 PE=3 SV=1

 Score =  111 bits (278), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 63/195 (32%), Positives = 98/195 (50%), Gaps = 13/195 (6%)

Query: 1   MLKLWKWYQNCLAVHPLKTQVISSGFLWGVGDIAAQYITHATAKSRLQLSDADEKFKVNW 60
           M KLW  Y   L  HPL T+ +S+GFL G GDI AQ + H       +  D   +FK+++
Sbjct: 1   MRKLWGLYLGLLDNHPLVTKSLSTGFLMGTGDILAQRLEH-------KFKDEKSQFKLDY 53

Query: 61  KRVAVTSSFGFGFVGPVGHFWYEGLDRFIRLKLQLPPKSARFVATKVAMDSIIFGPLDLF 120
           KRVA  S+ G  + GP+ H+WY  LD  ++       +    +  K+ +D ++F P+ + 
Sbjct: 54  KRVATMSTVGIFYSGPMLHYWYRSLDIMVK------GEGRSVIIKKMLIDQLLFAPVAIG 107

Query: 121 VFFTYMGFSTGKNVAQVKEDLKRDFLPALVLEGGIWPIVQVANFRYVPVRYQLLYVNIFC 180
            F T   F   K   +  E+  ++   A+ +   IWP  Q+ NF  VP   ++LY +I  
Sbjct: 108 GFMTVTNFINNKGELKNLENFTKELFYAVKINWLIWPAAQIINFSLVPPNLRVLYSSIIS 167

Query: 181 LLDSAFLSWVEQQKD 195
           +    FLS +   KD
Sbjct: 168 IFWGMFLSHISFDKD 182

Dictyostelium discoideum (taxid: 44689)

>sp|Q5TZ51|MPV17_DANRE Protein Mpv17 OS=Danio rerio GN=mpv17 PE=2 SV=1

 Score =  102 bits (254), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 66/189 (34%), Positives = 97/189 (51%), Gaps = 17/189 (8%)

Query: 1   MLKLWKWYQNCLAVHPLKTQVISSGFLWGVGDIAAQYITHATAKSRLQLSDADEKFKVNW 60
           M  LW+ YQ  +A HP K Q+I++G L GVGD+ +Q           QL +       N 
Sbjct: 1   MAGLWRSYQALMAKHPWKVQIITAGSLVGVGDVISQ-----------QLIERRGLANHNA 49

Query: 61  KRVAVTSSFGFGFVGPVGHFWYEGLDRFIRLKLQLPPKSARFVATKVAMDSIIFGPLDLF 120
           +R A   S GF FVGPV   WY+ LD+ +        KSA     K+ +D + F P  L 
Sbjct: 50  RRTAKMMSIGFFFVGPVVGGWYKVLDKLVTGG----TKSAAL--KKMLVDQVGFAPCFLG 103

Query: 121 VFFTYMGFSTGKNVAQVKEDLKRDFLPALVLEGGIWPIVQVANFRYVPVRYQLLYVNIFC 180
            F    G   G  V +    L+RD+  AL+    +WP VQ+ANF ++P+ ++L  V I  
Sbjct: 104 AFLGITGTLNGLTVEENVAKLQRDYTDALISNYYLWPPVQIANFYFIPLHHRLAVVQIVA 163

Query: 181 LLDSAFLSW 189
           ++ +++LSW
Sbjct: 164 VVWNSYLSW 172

Involved in mitochondria homeostasis.

Danio rerio (taxid: 7955)

>sp|P19258|MPV17_MOUSE Protein Mpv17 OS=Mus musculus GN=Mpv17 PE=2 SV=1

 Score =  102 bits (253), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 66/192 (34%), Positives = 92/192 (47%), Gaps = 17/192 (8%)

Query: 2   LKLWKWYQNCLAVHPLKTQVISSGFLWGVGDIAAQYITHATAKSRLQLSDADEKFKVNWK 61
           + LW+ YQ  LA HP K QV+++G L GVGD+ +Q +     +  LQ   A         
Sbjct: 1   MALWRAYQRALAAHPWKVQVLTAGSLMGVGDMISQQLVE---RRGLQQHQAG-------- 49

Query: 62  RVAVTSSFGFGFVGPVGHFWYEGLDRFIRLKLQLPPKSARFVATKVAMDSIIFGPLDLFV 121
           R     S G GFVGPV   WY+ LD  I      P  +      K+ +D   F P  L  
Sbjct: 50  RTLTMVSLGCGFVGPVVGGWYKVLDHLI------PGTTKVHALKKMLLDQGGFAPCFLGC 103

Query: 122 FFTYMGFSTGKNVAQVKEDLKRDFLPALVLEGGIWPIVQVANFRYVPVRYQLLYVNIFCL 181
           F   +G   G +       LKRD+  AL+    +WP VQ+ANF  VP+ Y+L  V    +
Sbjct: 104 FLPLVGILNGMSAQDNWAKLKRDYPDALITNYYLWPAVQLANFYLVPLHYRLAVVQCVAI 163

Query: 182 LDSAFLSWVEQQ 193
           + +++LSW   Q
Sbjct: 164 VWNSYLSWKAHQ 175

Involved in mitochondria homeostasis. May be involved in the metabolism of reactive oxygen species and control of oxidative phosphorylation and mitochondrial DNA (mtDNA) maintenance.

Mus musculus (taxid: 10090)

>sp|Q66GV0|MPV17_XENLA Protein Mpv17 OS=Xenopus laevis GN=mpv17 PE=2 SV=2

 Score =  102 bits (253), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 66/190 (34%), Positives = 96/190 (50%), Gaps = 19/190 (10%)

Query: 1   MLKLWKWYQNCLAVHPLKTQVISSGFLWGVGDIAAQYITHATAKSRLQLSDADEKFKVNW 60
           M  LW+ YQ  L  HP K Q++++G L GVGD+ +Q           QL +       + 
Sbjct: 1   MAGLWRAYQRLLGAHPWKVQIVTAGSLVGVGDVISQ-----------QLLERKGLKGHSI 49

Query: 61  KRVAVTSSFGFGFVGPVGHFWYEGLDRFIRLKLQLPPKSARFVA-TKVAMDSIIFGPLDL 119
           +R       GF FVGPV   WY+ LDR I       P S + VA  K+ +D + F P  L
Sbjct: 50  ERTVKMMGIGFCFVGPVVGGWYKILDRII-------PGSGKPVALKKMLLDQVAFAPCFL 102

Query: 120 FVFFTYMGFSTGKNVAQVKEDLKRDFLPALVLEGGIWPIVQVANFRYVPVRYQLLYVNIF 179
             F +      G +  Q+   LKRD+  AL+    IWP VQVANF ++P+ ++L  V   
Sbjct: 103 GCFLSIASALNGLSGEQIWGKLKRDYKDALITNYYIWPAVQVANFYFIPLYHRLAVVQFV 162

Query: 180 CLLDSAFLSW 189
            ++ +++LSW
Sbjct: 163 AIIWNSYLSW 172

Involved in mitochondria homeostasis.

Xenopus laevis (taxid: 8355)

>sp|Q5BK62|MPV17_RAT Protein Mpv17 OS=Rattus norvegicus GN=Mpv17 PE=2 SV=1

 Score =  101 bits (252), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 64/192 (33%), Positives = 90/192 (46%), Gaps = 17/192 (8%)

Query: 2   LKLWKWYQNCLAVHPLKTQVISSGFLWGVGDIAAQYITHATAKSRLQLSDADEKFKVNWK 61
           + LW+ YQ  LA HP K QV+++G L G+GDI +Q +       + Q             
Sbjct: 1   MALWRAYQRALAAHPWKVQVLTAGSLMGLGDIISQQLVERRGLQQHQTG----------- 49

Query: 62  RVAVTSSFGFGFVGPVGHFWYEGLDRFIRLKLQLPPKSARFVATKVAMDSIIFGPLDLFV 121
           R    +S G GFVGPV   WY  LD  I      P  +      K+ +D   F P  L  
Sbjct: 50  RTLTMASLGCGFVGPVVGGWYRVLDHLI------PGTTKVNALKKMLLDQGGFAPCFLGC 103

Query: 122 FFTYMGFSTGKNVAQVKEDLKRDFLPALVLEGGIWPIVQVANFRYVPVRYQLLYVNIFCL 181
           F   +G   G +       LKRD+  AL+    +WP VQ+ANF  VP+ Y+L  V    +
Sbjct: 104 FLPLVGVLNGMSAQDNWAKLKRDYPDALITNYYLWPAVQLANFYLVPLHYRLAVVQCVAV 163

Query: 182 LDSAFLSWVEQQ 193
           + +++LSW   Q
Sbjct: 164 VWNSYLSWKAHQ 175

Involved in mitochondria homeostasis. May be involved in the metabolism of reactive oxygen species and control of oxidative phosphorylation and mitochondrial DNA (mtDNA) maintenance.

Rattus norvegicus (taxid: 10116)

>sp|P39210|MPV17_HUMAN Protein Mpv17 OS=Homo sapiens GN=MPV17 PE=1 SV=1

 Score =  100 bits (249), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 64/188 (34%), Positives = 90/188 (47%), Gaps = 17/188 (9%)

Query: 2   LKLWKWYQNCLAVHPLKTQVISSGFLWGVGDIAAQYITHATAKSRLQLSDADEKFKVNWK 61
           + LW+ YQ  LA HP K QV+++G L G+GDI +Q +         Q             
Sbjct: 1   MALWRAYQRALAAHPWKVQVLTAGSLMGLGDIISQQLVERRGLQEHQRG----------- 49

Query: 62  RVAVTSSFGFGFVGPVGHFWYEGLDRFIRLKLQLPPKSARFVATKVAMDSIIFGPLDLFV 121
           R     S G GFVGPV   WY+ LDRFI      P  +      K+ +D   F P  L  
Sbjct: 50  RTLTMVSLGCGFVGPVVGGWYKVLDRFI------PGTTKVDALKKMLLDQGGFAPCFLGC 103

Query: 122 FFTYMGFSTGKNVAQVKEDLKRDFLPALVLEGGIWPIVQVANFRYVPVRYQLLYVNIFCL 181
           F   +G   G +       L+RD+  AL+    +WP VQ+ANF  VP+ Y+L  V    +
Sbjct: 104 FLPLVGALNGLSAQDNWAKLQRDYPDALITNYYLWPAVQLANFYLVPLHYRLAVVQCVAV 163

Query: 182 LDSAFLSW 189
           + +++LSW
Sbjct: 164 IWNSYLSW 171

Involved in mitochondria homeostasis. May be involved in the metabolism of reactive oxygen species and control of oxidative phosphorylation and mitochondrial DNA (mtDNA) maintenance.

Homo sapiens (taxid: 9606)

>sp|Q2KIN6|MPV17_BOVIN Protein Mpv17 OS=Bos taurus GN=MPV17 PE=2 SV=1

 Score = 99.8 bits (247), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 64/188 (34%), Positives = 91/188 (48%), Gaps = 17/188 (9%)

Query: 2   LKLWKWYQNCLAVHPLKTQVISSGFLWGVGDIAAQYITHATAKSRLQLSDADEKFKVNWK 61
           + LW+ YQ  L  HP K QV+++G L G+GD+ +Q +     +  LQ   A         
Sbjct: 1   MALWRAYQRALTAHPWKVQVLTAGSLMGLGDVISQQLVE---RRGLQAHQAG-------- 49

Query: 62  RVAVTSSFGFGFVGPVGHFWYEGLDRFIRLKLQLPPKSARFVATKVAMDSIIFGPLDLFV 121
           R    +S G GFVGPV   WY  LDR I      P  +      K+ +D   F P  L  
Sbjct: 50  RTLTMASLGCGFVGPVVGGWYRVLDRLI------PGTTKVDALKKMLLDQGGFAPCFLGC 103

Query: 122 FFTYMGFSTGKNVAQVKEDLKRDFLPALVLEGGIWPIVQVANFRYVPVRYQLLYVNIFCL 181
           F   +G   G +       L+RDF  AL+    +WP VQ+ANF  VP+ Y+L  V    +
Sbjct: 104 FLPLVGTLNGLSAQDNWAKLQRDFPDALITNYYLWPAVQLANFYLVPLHYRLAVVQCVAV 163

Query: 182 LDSAFLSW 189
           + +++LSW
Sbjct: 164 IWNSYLSW 171

Involved in mitochondria homeostasis. May be involved in the metabolism of reactive oxygen species and control of oxidative phosphorylation and mitochondrial DNA (mtDNA) maintenance.

Bos taurus (taxid: 9913)

>sp|Q4IPX8|SYM1_GIBZE Protein SYM1 OS=Gibberella zeae (strain PH-1 / ATCC MYA-4620 / FGSC 9075 / NRRL 31084) GN=SYM1 PE=3 SV=1

 Score = 97.1 bits (240), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 62/188 (32%), Positives = 97/188 (51%), Gaps = 18/188 (9%)

Query: 6   KWYQNCLAVHPLKTQVISSGFLWGVGDIAAQYITHATAKSRLQLSDADEKFKVNWKRVAV 65
           +WY + LA  PL TQ +++ FL+  GD+ AQ +       +  L        V   R+A+
Sbjct: 6   RWYNSRLAARPLLTQSVTTAFLFATGDVTAQQLVEKRGAQKHDL--------VRTGRMAL 57

Query: 66  TSSFGFGFVGPVGHFWYEGLDRFIRLKLQLPPKSARFVATKVAMDSIIFGPLDLFVFFTY 125
              F FG   PV   W+  L R + ++     K A  +A +VA D + F P+ + VF + 
Sbjct: 58  YGGFVFG---PVATTWFAFLARRVNVRNN---KKAEVLA-RVACDQLGFAPVMIGVFLSS 110

Query: 126 MGFSTGKNVAQVKEDLKRDFLPALVLEGGIWPIVQVANFRYVPVRYQLLYVNIFCLLDSA 185
           M    GK+V   KE + + + PAL     +WP VQV NF  +P++Y+L + NI  +  ++
Sbjct: 111 MATMEGKSV---KERIDKTWWPALKANWMVWPAVQVINFSLIPLQYRLFFANIIAIGWNS 167

Query: 186 FLSWVEQQ 193
           +LSWV  Q
Sbjct: 168 YLSWVNSQ 175

May be involved in cellular response to stress. Required to maintain mitochondrial DNA (mtDNA) integrity and stability.

Gibberella zeae (strain PH-1 / ATCC MYA-4620 / FGSC 9075 / NRRL 31084) (taxid: 229533)

>sp|Q7SCY7|SYM1_NEUCR Protein sym-1 OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=sym-1 PE=3 SV=2

 Score = 95.9 bits (237), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 57/188 (30%), Positives = 97/188 (51%), Gaps = 18/188 (9%)

Query: 6   KWYQNCLAVHPLKTQVISSGFLWGVGDIAAQYITHATAKSRLQLSDADEKFKVNWKRVAV 65
            WY+  LA  PL TQ +++  L+GVGD+AAQ +       R  LS+ D        R   
Sbjct: 3   SWYKAQLAARPLLTQAVTTSILFGVGDVAAQQLV-----DRRGLSNHDLT------RTGR 51

Query: 66  TSSFGFGFVGPVGHFWYEGLDRFIRLKLQLPPKSARFVATKVAMDSIIFGPLDLFVFFTY 125
              +G    GP    W+    RF++ ++ +P  + + +  +VA D  +F P  + +F   
Sbjct: 52  MVLYGGAVFGPAATTWF----RFLQKRVVVPGSTNKTILARVAADQGLFAPTFIGIFLGS 107

Query: 126 MGFSTGKNVAQVKEDLKRDFLPALVLEGGIWPIVQVANFRYVPVRYQLLYVNIFCLLDSA 185
           M    G +V   KE L++++  AL     +WP VQ+ NF+ VP+ +++L+VN+  +  + 
Sbjct: 108 MAVLEGTDV---KEKLQKNYWEALSTNWMVWPFVQMVNFKVVPLDHRVLFVNVISIGWNC 164

Query: 186 FLSWVEQQ 193
           +LSW+  Q
Sbjct: 165 YLSWLNGQ 172

May be involved in cellular response to stress. Required to maintain mitochondrial DNA (mtDNA) integrity and stability.

Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) (taxid: 367110)

>sp|Q54FR4|PX24D_DICDI PXMP2/4 family protein 4 OS=Dictyostelium discoideum GN=DDB_G0290631 PE=3 SV=1

 Score = 93.6 bits (231), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 56/182 (30%), Positives = 98/182 (53%), Gaps = 18/182 (9%)

Query: 8   YQNCLAVHPLKTQVISSGFLWGVGDIAAQYITHATAKSRLQLS-DADEKFKVNWKRVAVT 66
           Y + L  +P+ T+ ++SGFL+ + D   Q I         +LS D D+K+  ++KR    
Sbjct: 15  YLSQLHKYPVATKAVTSGFLYLISDSLVQGI---------ELSRDKDKKY--DFKRSMRM 63

Query: 67  SSFGFGFVGPVGHFWYEGLDRFIRLKLQLPPKSARFVATKVAMDSIIFGPLDLFVFFTYM 126
           + FGF   GP+ H+W++ LD+        P KS R    K+ +D ++  P+  F+FF+ M
Sbjct: 64  AVFGFAVTGPLFHYWFKYLDK------HFPKKSYRHAFIKLTIDQVVCSPVFNFLFFSGM 117

Query: 127 GFSTGKNVAQVKEDLKRDFLPALVLEGGIWPIVQVANFRYVPVRYQLLYVNIFCLLDSAF 186
           G   GK+   + E LK+D+L   V +  +WP +   NF Y+   +++ ++N+  +   AF
Sbjct: 118 GILEGKSKDDIVEKLKKDWLTTYVSDCVVWPFINFVNFAYISSIHRVTFMNVCNIGWGAF 177

Query: 187 LS 188
           L+
Sbjct: 178 LA 179

Dictyostelium discoideum (taxid: 44689)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	217
297835548	225	hypothetical protein ARALYDRAFT_479971 [	1.0	0.964	0.773	6e-99
225430031	218	PREDICTED: protein Mpv17 [Vitis vinifera	0.995	0.990	0.768	5e-97
110737868	235	hypothetical protein [Arabidopsis thalia	1.0	0.923	0.744	7e-97
147812172	218	hypothetical protein VITISV_033965 [Viti	0.995	0.990	0.768	8e-97
38454114	235	At3g24570 [Arabidopsis thaliana] gi|4134	1.0	0.923	0.740	2e-96
15230132	235	Peroxisomal membrane 22 kDa (Mpv17/PMP22	1.0	0.923	0.740	2e-96
224143550	232	predicted protein [Populus trichocarpa]	0.986	0.922	0.735	3e-96
225445224	217	PREDICTED: protein Mpv17 [Vitis vinifera	0.995	0.995	0.754	1e-95
356549797	215	PREDICTED: protein sym-1-like [Glycine m	0.986	0.995	0.742	5e-94
449443149	212	PREDICTED: PXMP2/4 family protein 2-like	0.972	0.995	0.754	6e-93

>gi|297835548|ref|XP_002885656.1| hypothetical protein ARALYDRAFT_479971 [Arabidopsis lyrata subsp. lyrata] gi|297331496|gb|EFH61915.1| hypothetical protein ARALYDRAFT_479971 [Arabidopsis lyrata subsp. lyrata]

 Score =  365 bits (938), Expect = 6e-99,   Method: Compositional matrix adjust.
 Identities = 174/225 (77%), Positives = 197/225 (87%), Gaps = 8/225 (3%)

Query: 1   MLKLWKWYQNCLAVHPLKTQVISSGFLWGVGDIAAQYITHATAKSRL-------QLSDAD 53
           MLKLW+WYQ CL VHP+KTQVISSGFLWG GD+ AQYITH+TAK RL       + +DAD
Sbjct: 1   MLKLWRWYQRCLTVHPVKTQVISSGFLWGFGDVTAQYITHSTAKPRLLRLTETNKDADAD 60

Query: 54  EKFKVNWKRVAVTSSFGFGFVGPVGHFWYEGLDRFIRLKLQLPPKSARFVATKVAMDSII 113
            +FKVNWKRVA+TS FGFGFVGPVGHFWYEGLD+FI+LKL+  PKS RFVA KVAMD +I
Sbjct: 61  AEFKVNWKRVAITSMFGFGFVGPVGHFWYEGLDKFIKLKLRYVPKSTRFVAAKVAMDGLI 120

Query: 114 FGPLDLFVFFTYMGFSTGKNVAQVKEDLKRDFLPALVLEGGIWPIVQVANFRYVPVRYQL 173
           FGP+DL VFFTYMGF+TGKN A+VKE LKRDFLPAL LEGG WP++Q+ANFRYVPV+YQL
Sbjct: 121 FGPIDLLVFFTYMGFATGKNTAEVKEGLKRDFLPALALEGGAWPLLQIANFRYVPVQYQL 180

Query: 174 LYVNIFCLLDSAFLSWVEQQKDAAWKQWFT-SFHSLEERGGKGGL 217
           LYVNIFCL+DSAFLSWVEQQKDAAWKQWFT SF  L+ERGG+GG+
Sbjct: 181 LYVNIFCLVDSAFLSWVEQQKDAAWKQWFTSSFQPLKERGGQGGV 225

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225430031|ref|XP_002284227.1| PREDICTED: protein Mpv17 [Vitis vinifera] gi|296081890|emb|CBI20895.3| unnamed protein product [Vitis vinifera]

 Score =  359 bits (921), Expect = 5e-97,   Method: Compositional matrix adjust.
 Identities = 166/216 (76%), Positives = 191/216 (88%)

Query: 1   MLKLWKWYQNCLAVHPLKTQVISSGFLWGVGDIAAQYITHATAKSRLQLSDADEKFKVNW 60
           +L+LWKWYQ+CLAVHP+KTQ+ISSG +WG GDI AQ ITH TAK   Q+ D D++ K+NW
Sbjct: 3   LLRLWKWYQDCLAVHPVKTQIISSGLIWGFGDICAQTITHTTAKRHHQIGDEDKELKINW 62

Query: 61  KRVAVTSSFGFGFVGPVGHFWYEGLDRFIRLKLQLPPKSARFVATKVAMDSIIFGPLDLF 120
           +RVA TS FGFGFVGPVGHFWYEGLDR IR +LQL PKS RFVA KVA+D IIFGPLDL 
Sbjct: 63  RRVATTSLFGFGFVGPVGHFWYEGLDRLIRHRLQLQPKSFRFVAAKVAIDGIIFGPLDLL 122

Query: 121 VFFTYMGFSTGKNVAQVKEDLKRDFLPALVLEGGIWPIVQVANFRYVPVRYQLLYVNIFC 180
           VFF+YMGFSTGK+VAQVKED+KRDFLPAL+LEGGIWPIVQV NFR++PVRYQLLYVN FC
Sbjct: 123 VFFSYMGFSTGKSVAQVKEDVKRDFLPALILEGGIWPIVQVVNFRFIPVRYQLLYVNFFC 182

Query: 181 LLDSAFLSWVEQQKDAAWKQWFTSFHSLEERGGKGG 216
           LLDS+FLSWVEQQ+DA WKQWFTSF +L+E+ G+GG
Sbjct: 183 LLDSSFLSWVEQQQDAPWKQWFTSFLALKEKEGQGG 218

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|110737868|dbj|BAF00872.1| hypothetical protein [Arabidopsis thaliana]

 Score =  358 bits (920), Expect = 7e-97,   Method: Compositional matrix adjust.
 Identities = 175/235 (74%), Positives = 197/235 (83%), Gaps = 18/235 (7%)

Query: 1   MLKLWKWYQNCLAVHPLKTQVISSGFLWGVGDIAAQYITHATAKSRL-------QLSDAD 53
           MLKLW+WYQ CL VHP+KTQVISSGFLWG GD+ AQYITH+TAK RL       + +DAD
Sbjct: 1   MLKLWRWYQRCLTVHPVKTQVISSGFLWGFGDVTAQYITHSTAKRRLLRLTETNKDADAD 60

Query: 54  EK----------FKVNWKRVAVTSSFGFGFVGPVGHFWYEGLDRFIRLKLQLPPKSARFV 103
            +          FKVNWKRVA+TS FGFGFVGPVGHFWYEGLDRFI+LKL+  PKS RFV
Sbjct: 61  AEIKVKWKQDAEFKVNWKRVAITSMFGFGFVGPVGHFWYEGLDRFIKLKLRYVPKSTRFV 120

Query: 104 ATKVAMDSIIFGPLDLFVFFTYMGFSTGKNVAQVKEDLKRDFLPALVLEGGIWPIVQVAN 163
           A KVAMD +IFGP+DL VFFTYMGF+TGKN A+VKE LKRDFLPAL LEGG WP++Q+AN
Sbjct: 121 AAKVAMDGLIFGPVDLLVFFTYMGFATGKNTAEVKEGLKRDFLPALALEGGAWPLLQIAN 180

Query: 164 FRYVPVRYQLLYVNIFCLLDSAFLSWVEQQKDAAWKQWFT-SFHSLEERGGKGGL 217
           FRYVPV+YQLLYVNIFCL+DSAFLSWVEQQKDAAWKQWFT SF  L+ERGG+GG+
Sbjct: 181 FRYVPVQYQLLYVNIFCLVDSAFLSWVEQQKDAAWKQWFTSSFQPLKERGGQGGV 235

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147812172|emb|CAN61516.1| hypothetical protein VITISV_033965 [Vitis vinifera]

 Score =  358 bits (919), Expect = 8e-97,   Method: Compositional matrix adjust.
 Identities = 166/216 (76%), Positives = 191/216 (88%)

Query: 1   MLKLWKWYQNCLAVHPLKTQVISSGFLWGVGDIAAQYITHATAKSRLQLSDADEKFKVNW 60
           +L+LWKWYQ+CLAVHP+KTQ+ISSG +WG GDI AQ ITH TAK   Q+ D D++ K+NW
Sbjct: 3   LLRLWKWYQDCLAVHPVKTQIISSGLIWGFGDICAQTITHTTAKRXHQIGDEDKELKINW 62

Query: 61  KRVAVTSSFGFGFVGPVGHFWYEGLDRFIRLKLQLPPKSARFVATKVAMDSIIFGPLDLF 120
           +RVA TS FGFGFVGPVGHFWYEGLDR IR +LQL PKS RFVA KVA+D IIFGPLDL 
Sbjct: 63  RRVATTSLFGFGFVGPVGHFWYEGLDRLIRHRLQLQPKSFRFVAAKVAIDGIIFGPLDLL 122

Query: 121 VFFTYMGFSTGKNVAQVKEDLKRDFLPALVLEGGIWPIVQVANFRYVPVRYQLLYVNIFC 180
           VFF+YMGFSTGK+VAQVKED+KRDFLPAL+LEGGIWPIVQV NFR++PVRYQLLYVN FC
Sbjct: 123 VFFSYMGFSTGKSVAQVKEDVKRDFLPALILEGGIWPIVQVVNFRFIPVRYQLLYVNFFC 182

Query: 181 LLDSAFLSWVEQQKDAAWKQWFTSFHSLEERGGKGG 216
           LLDS+FLSWVEQQ+DA WKQWFTSF +L+E+ G+GG
Sbjct: 183 LLDSSFLSWVEQQQDAPWKQWFTSFLALKEKEGQGG 218

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|38454114|gb|AAR20751.1| At3g24570 [Arabidopsis thaliana] gi|41349920|gb|AAS00345.1| At3g24570 [Arabidopsis thaliana]

 Score =  357 bits (916), Expect = 2e-96,   Method: Compositional matrix adjust.
 Identities = 174/235 (74%), Positives = 197/235 (83%), Gaps = 18/235 (7%)

Query: 1   MLKLWKWYQNCLAVHPLKTQVISSGFLWGVGDIAAQYITHATAKSRL-------QLSDAD 53
           MLKLW+WYQ CL VHP+KTQVISSGFLWG GD+ AQYITH+TAK RL       + +DAD
Sbjct: 1   MLKLWRWYQRCLTVHPVKTQVISSGFLWGFGDVTAQYITHSTAKRRLLRLTETNKDADAD 60

Query: 54  EK----------FKVNWKRVAVTSSFGFGFVGPVGHFWYEGLDRFIRLKLQLPPKSARFV 103
            +          FKVNWKRVA+TS FGFGFVGPVGHFWYEGLD+FI+LKL+  PKS RFV
Sbjct: 61  TEIKVKWKQDAEFKVNWKRVAITSMFGFGFVGPVGHFWYEGLDKFIKLKLRYVPKSTRFV 120

Query: 104 ATKVAMDSIIFGPLDLFVFFTYMGFSTGKNVAQVKEDLKRDFLPALVLEGGIWPIVQVAN 163
           A KVAMD +IFGP+DL VFFTYMGF+TGKN A+VKE LKRDFLPAL LEGG WP++Q+AN
Sbjct: 121 AAKVAMDGLIFGPVDLLVFFTYMGFATGKNTAEVKEGLKRDFLPALALEGGAWPLLQIAN 180

Query: 164 FRYVPVRYQLLYVNIFCLLDSAFLSWVEQQKDAAWKQWFT-SFHSLEERGGKGGL 217
           FRYVPV+YQLLYVNIFCL+DSAFLSWVEQQKDAAWKQWFT SF  L+ERGG+GG+
Sbjct: 181 FRYVPVQYQLLYVNIFCLVDSAFLSWVEQQKDAAWKQWFTSSFQPLKERGGQGGV 235

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|15230132|ref|NP_189100.1| Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein [Arabidopsis thaliana] gi|9294052|dbj|BAB02009.1| unnamed protein product [Arabidopsis thaliana] gi|332643403|gb|AEE76924.1| Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein [Arabidopsis thaliana]

 Score =  357 bits (916), Expect = 2e-96,   Method: Compositional matrix adjust.
 Identities = 174/235 (74%), Positives = 197/235 (83%), Gaps = 18/235 (7%)

Query: 1   MLKLWKWYQNCLAVHPLKTQVISSGFLWGVGDIAAQYITHATAKSRL-------QLSDAD 53
           MLKLW+WYQ CL VHP+KTQVISSGFLWG GD+ AQYITH+TAK RL       + +DAD
Sbjct: 1   MLKLWRWYQRCLTVHPVKTQVISSGFLWGFGDVTAQYITHSTAKRRLLRLTETNKDADAD 60

Query: 54  EK----------FKVNWKRVAVTSSFGFGFVGPVGHFWYEGLDRFIRLKLQLPPKSARFV 103
            +          FKVNWKRVA+TS FGFGFVGPVGHFWYEGLD+FI+LKL+  PKS RFV
Sbjct: 61  AEIKVKWKQDAEFKVNWKRVAITSMFGFGFVGPVGHFWYEGLDKFIKLKLRYVPKSTRFV 120

Query: 104 ATKVAMDSIIFGPLDLFVFFTYMGFSTGKNVAQVKEDLKRDFLPALVLEGGIWPIVQVAN 163
           A KVAMD +IFGP+DL VFFTYMGF+TGKN A+VKE LKRDFLPAL LEGG WP++Q+AN
Sbjct: 121 AAKVAMDGLIFGPVDLLVFFTYMGFATGKNTAEVKEGLKRDFLPALALEGGAWPLLQIAN 180

Query: 164 FRYVPVRYQLLYVNIFCLLDSAFLSWVEQQKDAAWKQWFT-SFHSLEERGGKGGL 217
           FRYVPV+YQLLYVNIFCL+DSAFLSWVEQQKDAAWKQWFT SF  L+ERGG+GG+
Sbjct: 181 FRYVPVQYQLLYVNIFCLVDSAFLSWVEQQKDAAWKQWFTSSFQPLKERGGQGGV 235

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224143550|ref|XP_002324994.1| predicted protein [Populus trichocarpa] gi|222866428|gb|EEF03559.1| predicted protein [Populus trichocarpa]

 Score =  356 bits (914), Expect = 3e-96,   Method: Compositional matrix adjust.
 Identities = 170/231 (73%), Positives = 190/231 (82%), Gaps = 17/231 (7%)

Query: 1   MLKLWKWYQNCLAVHPLKTQVISSGFLWGVGDIAAQYITHATAKSRLQLS---------- 50
           MLK WKWYQ+CL+ HP+KTQ++SSG LWG+GDI AQYITH+TA S L  S          
Sbjct: 1   MLKAWKWYQHCLSSHPVKTQIVSSGTLWGIGDIGAQYITHSTATSLLPKSVTSLRIGDLL 60

Query: 51  -------DADEKFKVNWKRVAVTSSFGFGFVGPVGHFWYEGLDRFIRLKLQLPPKSARFV 103
                  +   +FK+NWKRVA+TS FGFGFVGPVGHFWYEGLDRFIRL+  L PKS RFV
Sbjct: 61  LVIYFKNNEGAEFKINWKRVAITSMFGFGFVGPVGHFWYEGLDRFIRLRFLLQPKSPRFV 120

Query: 104 ATKVAMDSIIFGPLDLFVFFTYMGFSTGKNVAQVKEDLKRDFLPALVLEGGIWPIVQVAN 163
           ATKVA D IIFGP DLFVFFTYMGFSTGKNVAQVKED+KRDFLPAL+LEGG+WPI QV N
Sbjct: 121 ATKVAADGIIFGPFDLFVFFTYMGFSTGKNVAQVKEDVKRDFLPALILEGGVWPIFQVVN 180

Query: 164 FRYVPVRYQLLYVNIFCLLDSAFLSWVEQQKDAAWKQWFTSFHSLEERGGK 214
           FRYVPVRYQLLYVN+FCL+DSAFLSW+EQQKDA WKQWFTSF  L+ERGG+
Sbjct: 181 FRYVPVRYQLLYVNVFCLIDSAFLSWIEQQKDAPWKQWFTSFQPLKERGGE 231

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225445224|ref|XP_002284391.1| PREDICTED: protein Mpv17 [Vitis vinifera] gi|297738820|emb|CBI28065.3| unnamed protein product [Vitis vinifera]

 Score =  354 bits (909), Expect = 1e-95,   Method: Compositional matrix adjust.
 Identities = 163/216 (75%), Positives = 189/216 (87%)

Query: 1   MLKLWKWYQNCLAVHPLKTQVISSGFLWGVGDIAAQYITHATAKSRLQLSDADEKFKVNW 60
           ML  WKWYQ C+++HP+KTQVISSG LWGVGDI AQ ITH++A+ RLQ+SDA + FK++W
Sbjct: 1   MLNAWKWYQRCMSLHPVKTQVISSGILWGVGDITAQSITHSSARKRLQISDAGQDFKIDW 60

Query: 61  KRVAVTSSFGFGFVGPVGHFWYEGLDRFIRLKLQLPPKSARFVATKVAMDSIIFGPLDLF 120
           KR A+TS FGFGFVGPVGHFWYEGLDRFIRL+L L P S RFVA+KVAMDS+IFGP +LF
Sbjct: 61  KRTAITSMFGFGFVGPVGHFWYEGLDRFIRLRLLLQPASVRFVASKVAMDSLIFGPFELF 120

Query: 121 VFFTYMGFSTGKNVAQVKEDLKRDFLPALVLEGGIWPIVQVANFRYVPVRYQLLYVNIFC 180
           VFF++MGFSTGKN AQVKEDLKRDFLPAL++E G WP VQV NFRYVPVRYQLLYVN+FC
Sbjct: 121 VFFSHMGFSTGKNAAQVKEDLKRDFLPALIVESGAWPFVQVVNFRYVPVRYQLLYVNLFC 180

Query: 181 LLDSAFLSWVEQQKDAAWKQWFTSFHSLEERGGKGG 216
           LLDS FLSW+EQQKDA+WKQWF+S  S +E+G  GG
Sbjct: 181 LLDSIFLSWMEQQKDASWKQWFSSSPSSKEQGHGGG 216

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356549797|ref|XP_003543277.1| PREDICTED: protein sym-1-like [Glycine max]

 Score =  349 bits (895), Expect = 5e-94,   Method: Compositional matrix adjust.
 Identities = 159/214 (74%), Positives = 184/214 (85%)

Query: 1   MLKLWKWYQNCLAVHPLKTQVISSGFLWGVGDIAAQYITHATAKSRLQLSDADEKFKVNW 60
           M+K+W WYQNCL+VHP+KTQ ISS  LWGVG ++AQYITH+ AK  LQLSD+D KF +NW
Sbjct: 1   MMKVWNWYQNCLSVHPVKTQAISSAILWGVGYLSAQYITHSAAKKPLQLSDSDAKFTINW 60

Query: 61  KRVAVTSSFGFGFVGPVGHFWYEGLDRFIRLKLQLPPKSARFVATKVAMDSIIFGPLDLF 120
            R+ VTS FGFGFVGPVGHFWYEGLD+FIR KLQL PKS R VATKVAMD IIFGPL LF
Sbjct: 61  NRLVVTSMFGFGFVGPVGHFWYEGLDKFIRFKLQLKPKSVRSVATKVAMDGIIFGPLHLF 120

Query: 121 VFFTYMGFSTGKNVAQVKEDLKRDFLPALVLEGGIWPIVQVANFRYVPVRYQLLYVNIFC 180
           VFFTYMG   GKNVAQVK+DLKR+++PAL+LEGG+WP+VQV NF Y+PV+YQLLYVN+FC
Sbjct: 121 VFFTYMGLCAGKNVAQVKDDLKRNYVPALILEGGVWPVVQVFNFWYLPVKYQLLYVNLFC 180

Query: 181 LLDSAFLSWVEQQKDAAWKQWFTSFHSLEERGGK 214
           LLDS FLSW+EQQKD  WK+WF SFHS  E+GG+
Sbjct: 181 LLDSVFLSWLEQQKDTPWKKWFASFHSTNEKGGR 214

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449443149|ref|XP_004139343.1| PREDICTED: PXMP2/4 family protein 2-like [Cucumis sativus] gi|449516296|ref|XP_004165183.1| PREDICTED: PXMP2/4 family protein 2-like [Cucumis sativus]

 Score =  345 bits (886), Expect = 6e-93,   Method: Compositional matrix adjust.
 Identities = 160/212 (75%), Positives = 182/212 (85%), Gaps = 1/212 (0%)

Query: 1   MLKLWKWYQNCLAVHPLKTQVISSGFLWGVGDIAAQYITHATAKSRLQLS-DADEKFKVN 59
           M +LWKWYQNCL  HP+KTQVISSGFLWG GDIAAQYITH+  K+ L  S DA E+FK+N
Sbjct: 1   MFRLWKWYQNCLTFHPVKTQVISSGFLWGTGDIAAQYITHSATKTHLPTSSDAVEEFKIN 60

Query: 60  WKRVAVTSSFGFGFVGPVGHFWYEGLDRFIRLKLQLPPKSARFVATKVAMDSIIFGPLDL 119
           WKRV +TS FGFGFVGPVGH WYEGLDRFIRLKLQL PKSA+FV  K+AMD +IFGP+DL
Sbjct: 61  WKRVGITSMFGFGFVGPVGHMWYEGLDRFIRLKLQLQPKSAKFVGAKLAMDGLIFGPIDL 120

Query: 120 FVFFTYMGFSTGKNVAQVKEDLKRDFLPALVLEGGIWPIVQVANFRYVPVRYQLLYVNIF 179
             FF+YMGF+ GK+VA+VKEDLKRD LPA +L G +WPI+QVANFRYVPVRYQLLYVN+F
Sbjct: 121 VFFFSYMGFANGKDVAEVKEDLKRDVLPAFILSGTVWPIIQVANFRYVPVRYQLLYVNMF 180

Query: 180 CLLDSAFLSWVEQQKDAAWKQWFTSFHSLEER 211
           CLLDSAFLSW EQQ DA WKQWFTSF+  ++R
Sbjct: 181 CLLDSAFLSWFEQQNDAPWKQWFTSFNPFKDR 212

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	217
TAIR|locus:2091767	235	AT3G24570 "AT3G24570" [Arabido	0.760	0.702	0.710	5.7e-86
UNIPROTKB|P39210	176	MPV17 "Protein Mpv17" [Homo sa	0.470	0.579	0.336	2.4e-19
MGI|MGI:97138	176	Mpv17 "MpV17 mitochondrial inn	0.493	0.607	0.318	2.4e-19
ZFIN|ZDB-GENE-040426-1168	177	mpv17 "MpV17 transgene, murine	0.474	0.581	0.321	3.9e-19
DICTYBASE|DDB_G0278529	193	DDB_G0278529 "pmp22 family pro	0.838	0.943	0.287	6.5e-19
UNIPROTKB|J9P9X6	176	MPV17 "Uncharacterized protein	0.470	0.579	0.336	8.1e-19
RGD|1310512	176	Mpv17 "MpV17 mitochondrial inn	0.488	0.602	0.324	8.1e-19
UNIPROTKB|Q5BK62	176	Mpv17 "Protein Mpv17" [Rattus	0.488	0.602	0.324	8.1e-19
UNIPROTKB|Q2KIN6	176	MPV17 "Protein Mpv17" [Bos tau	0.470	0.579	0.336	2.1e-18
SGD|S000004241	197	SYM1 "Protein required for eth	0.815	0.898	0.271	7.7e-16

TAIR|locus:2091767 AT3G24570 "AT3G24570" [Arabidopsis thaliana (taxid:3702)]

 Score = 638 (229.6 bits), Expect = 5.7e-86, Sum P(2) = 5.7e-86
 Identities = 118/166 (71%), Positives = 134/166 (80%)

Query:    53 DEKFKVNWKRXXXXXXXXXXXXXXXXXXWYEGLDRFIRLKLQLPPKSARFVATKVAMDSI 112
             D +FKVNWKR                  WYEGLD+FI+LKL+  PKS RFVA KVAMD +
Sbjct:    70 DAEFKVNWKRVAITSMFGFGFVGPVGHFWYEGLDKFIKLKLRYVPKSTRFVAAKVAMDGL 129

Query:   113 IFGPLDLFVFFTYMGFSTGKNVAQVKEDLKRDFLPALVLEGGIWPIVQVANFRYVPVRYQ 172
             IFGP+DL VFFTYMGF+TGKN A+VKE LKRDFLPAL LEGG WP++Q+ANFRYVPV+YQ
Sbjct:   130 IFGPVDLLVFFTYMGFATGKNTAEVKEGLKRDFLPALALEGGAWPLLQIANFRYVPVQYQ 189

Query:   173 LLYVNIFCLLDSAFLSWVEQQKDAAWKQWFTS-FHSLEERGGKGGL 217
             LLYVNIFCL+DSAFLSWVEQQKDAAWKQWFTS F  L+ERGG+GG+
Sbjct:   190 LLYVNIFCLVDSAFLSWVEQQKDAAWKQWFTSSFQPLKERGGQGGV 235

GO:0003674 "molecular_function" evidence=ND

GO:0005739 "mitochondrion" evidence=ISM

GO:0005778 "peroxisomal membrane" evidence=ISS

GO:0008150 "biological_process" evidence=ND

GO:0016021 "integral to membrane" evidence=IEA

UNIPROTKB|P39210 MPV17 "Protein Mpv17" [Homo sapiens (taxid:9606)]

 Score = 143 (55.4 bits), Expect = 2.4e-19, Sum P(2) = 2.4e-19
 Identities = 37/110 (33%), Positives = 56/110 (50%)

Query:    81 WYEGLDRFIRLKLQLPPKSARFVATK-VAMDSIIFGPLDLFVFFTYMGFSTGKNVAQVKE 139
             WY+ LDRFI       P + +  A K + +D   F P  L  F   +G   G +      
Sbjct:    69 WYKVLDRFI-------PGTTKVDALKKMLLDQGGFAPCFLGCFLPLVGALNGLSAQDNWA 121

Query:   140 DLKRDFLPALVLEGGIWPIVQVANFRYVPVRYQLLYVNIFCLLDSAFLSW 189
              L+RD+  AL+    +WP VQ+ANF  VP+ Y+L  V    ++ +++LSW
Sbjct:   122 KLQRDYPDALITNYYLWPAVQLANFYLVPLHYRLAVVQCVAVIWNSYLSW 171

GO:0016021 "integral to membrane" evidence=IEA

GO:0072593 "reactive oxygen species metabolic process" evidence=IEA

GO:0000002 "mitochondrial genome maintenance" evidence=IMP

GO:0005743 "mitochondrial inner membrane" evidence=IDA

GO:0003674 "molecular_function" evidence=ND

GO:0042592 "homeostatic process" evidence=IMP

GO:0032836 "glomerular basement membrane development" evidence=ISS

GO:0034614 "cellular response to reactive oxygen species" evidence=ISS

GO:0048839 "inner ear development" evidence=ISS

GO:2000377 "regulation of reactive oxygen species metabolic process" evidence=ISS

GO:0005777 "peroxisome" evidence=NAS;IDA

GO:0005739 "mitochondrion" evidence=IDA

MGI|MGI:97138 Mpv17 "MpV17 mitochondrial inner membrane protein" [Mus musculus (taxid:10090)]

 Score = 143 (55.4 bits), Expect = 2.4e-19, Sum P(2) = 2.4e-19
 Identities = 36/113 (31%), Positives = 53/113 (46%)

Query:    81 WYEGLDRFIRLKLQLPPKSARFVATKVAMDSIIFGPLDLFVFFTYMGFSTGKNVAQVKED 140
             WY+ LD  I      P  +      K+ +D   F P  L  F   +G   G +       
Sbjct:    69 WYKVLDHLI------PGTTKVHALKKMLLDQGGFAPCFLGCFLPLVGILNGMSAQDNWAK 122

Query:   141 LKRDFLPALVLEGGIWPIVQVANFRYVPVRYQLLYVNIFCLLDSAFLSWVEQQ 193
             LKRD+  AL+    +WP VQ+ANF  VP+ Y+L  V    ++ +++LSW   Q
Sbjct:   123 LKRDYPDALITNYYLWPAVQLANFYLVPLHYRLAVVQCVAIVWNSYLSWKAHQ 175

GO:0000002 "mitochondrial genome maintenance" evidence=ISO

GO:0005739 "mitochondrion" evidence=ISO;IDA;IMP

GO:0005743 "mitochondrial inner membrane" evidence=ISO

GO:0005777 "peroxisome" evidence=IDA

GO:0007605 "sensory perception of sound" evidence=IMP

GO:0016020 "membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0032836 "glomerular basement membrane development" evidence=IMP

GO:0034614 "cellular response to reactive oxygen species" evidence=IMP

GO:0042592 "homeostatic process" evidence=ISO

GO:0048839 "inner ear development" evidence=IMP

GO:0072593 "reactive oxygen species metabolic process" evidence=IDA

GO:2000377 "regulation of reactive oxygen species metabolic process" evidence=IMP

ZFIN|ZDB-GENE-040426-1168 mpv17 "MpV17 transgene, murine homolog, glomerulosclerosis" [Danio rerio (taxid:7955)]

 Score = 146 (56.5 bits), Expect = 3.9e-19, Sum P(2) = 3.9e-19
 Identities = 35/109 (32%), Positives = 57/109 (52%)

Query:    81 WYEGLDRFIRLKLQLPPKSARFVATKVAMDSIIFGPLDLFVFFTYMGFSTGKNVAQVKED 140
             WY+ LD+ +        KSA     K+ +D + F P  L  F    G   G  V +    
Sbjct:    70 WYKVLDKLVTGGT----KSAAL--KKMLVDQVGFAPCFLGAFLGITGTLNGLTVEENVAK 123

Query:   141 LKRDFLPALVLEGGIWPIVQVANFRYVPVRYQLLYVNIFCLLDSAFLSW 189
             L+RD+  AL+    +WP VQ+ANF ++P+ ++L  V I  ++ +++LSW
Sbjct:   124 LQRDYTDALISNYYLWPPVQIANFYFIPLHHRLAVVQIVAVVWNSYLSW 172

GO:0016021 "integral to membrane" evidence=IEA

GO:0003674 "molecular_function" evidence=ND

GO:0016020 "membrane" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA

GO:0005743 "mitochondrial inner membrane" evidence=IEA

DICTYBASE|DDB_G0278529 DDB_G0278529 "pmp22 family protein" [Dictyostelium discoideum (taxid:44689)]

 Score = 227 (85.0 bits), Expect = 6.5e-19, P = 6.5e-19
 Identities = 56/195 (28%), Positives = 87/195 (44%)

Query:     1 MLKLWKWYQNCLAVHPLKTQVISSGFLWGVGDIAAQYITHATAKSRLQLSDADEKFKVNW 60
             M KLW  Y   L  HPL T+ +S+GFL G GDI AQ + H       +  D   +FK+++
Sbjct:     1 MRKLWGLYLGLLDNHPLVTKSLSTGFLMGTGDILAQRLEH-------KFKDEKSQFKLDY 53

Query:    61 KRXXXXXXXXXXXXXXXXXXWYEGLDRFIRLKLQLPPKSARFVATKVAMDSIIFGPLDLF 120
             KR                  WY  LD  ++       +    +  K+ +D ++F P+ + 
Sbjct:    54 KRVATMSTVGIFYSGPMLHYWYRSLDIMVK------GEGRSVIIKKMLIDQLLFAPVAIG 107

Query:   121 VFFTYMGFSTGKNVAQVKEDLKRDFLPALVLEGGIWPIVQVANFRYVPVRYQLLYVNIFC 180
              F T   F   K   +  E+  ++   A+ +   IWP  Q+ NF  VP   ++LY +I  
Sbjct:   108 GFMTVTNFINNKGELKNLENFTKELFYAVKINWLIWPAAQIINFSLVPPNLRVLYSSIIS 167

Query:   181 LLDSAFLSWVEQQKD 195
             +    FLS +   KD
Sbjct:   168 IFWGMFLSHISFDKD 182

GO:0016021 "integral to membrane" evidence=IEA

GO:0008150 "biological_process" evidence=ND

GO:0003674 "molecular_function" evidence=ND

GO:0016020 "membrane" evidence=IEA

UNIPROTKB|J9P9X6 MPV17 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 138 (53.6 bits), Expect = 8.1e-19, Sum P(2) = 8.1e-19
 Identities = 37/110 (33%), Positives = 55/110 (50%)

Query:    81 WYEGLDRFIRLKLQLPPKSARFVATK-VAMDSIIFGPLDLFVFFTYMGFSTGKNVAQVKE 139
             WY  LDR I       P +A+  A K + +D   F P  L  F   +G   G +      
Sbjct:    69 WYRVLDRLI-------PGTAKADALKKMLLDQGGFAPCFLGCFLPLVGALNGLSAQDNWA 121

Query:   140 DLKRDFLPALVLEGGIWPIVQVANFRYVPVRYQLLYVNIFCLLDSAFLSW 189
              L+RD+  AL+    +WP VQ+ANF  VP+ Y+L  V    ++ +++LSW
Sbjct:   122 KLRRDYPDALLTNYYLWPAVQLANFYLVPLHYRLAVVQCVAVIWNSYLSW 171

GO:0016021 "integral to membrane" evidence=IEA

RGD|1310512 Mpv17 "MpV17 mitochondrial inner membrane protein" [Rattus norvegicus (taxid:10116)]

 Score = 138 (53.6 bits), Expect = 8.1e-19, Sum P(2) = 8.1e-19
 Identities = 37/114 (32%), Positives = 54/114 (47%)

Query:    81 WYEGLDRFIRLKLQLPPKSARFVATK-VAMDSIIFGPLDLFVFFTYMGFSTGKNVAQVKE 139
             WY  LD  I       P + +  A K + +D   F P  L  F   +G   G +      
Sbjct:    69 WYRVLDHLI-------PGTTKVNALKKMLLDQGGFAPCFLGCFLPLVGVLNGMSAQDNWA 121

Query:   140 DLKRDFLPALVLEGGIWPIVQVANFRYVPVRYQLLYVNIFCLLDSAFLSWVEQQ 193
              LKRD+  AL+    +WP VQ+ANF  VP+ Y+L  V    ++ +++LSW   Q
Sbjct:   122 KLKRDYPDALITNYYLWPAVQLANFYLVPLHYRLAVVQCVAVVWNSYLSWKAHQ 175

GO:0000002 "mitochondrial genome maintenance" evidence=IEA;ISO

GO:0005739 "mitochondrion" evidence=ISO

GO:0005743 "mitochondrial inner membrane" evidence=IEA;ISO

GO:0005777 "peroxisome" evidence=IEA;ISO

GO:0007605 "sensory perception of sound" evidence=ISO

GO:0016021 "integral to membrane" evidence=IEA

GO:0032836 "glomerular basement membrane development" evidence=IEA;ISO

GO:0034614 "cellular response to reactive oxygen species" evidence=IEA;ISO

GO:0042592 "homeostatic process" evidence=IEA;ISO

GO:0048839 "inner ear development" evidence=IEA;ISO

GO:0072593 "reactive oxygen species metabolic process" evidence=IEA;ISO

GO:2000377 "regulation of reactive oxygen species metabolic process" evidence=IEA;ISO

UNIPROTKB|Q5BK62 Mpv17 "Protein Mpv17" [Rattus norvegicus (taxid:10116)]

 Score = 138 (53.6 bits), Expect = 8.1e-19, Sum P(2) = 8.1e-19
 Identities = 37/114 (32%), Positives = 54/114 (47%)

Query:    81 WYEGLDRFIRLKLQLPPKSARFVATK-VAMDSIIFGPLDLFVFFTYMGFSTGKNVAQVKE 139
             WY  LD  I       P + +  A K + +D   F P  L  F   +G   G +      
Sbjct:    69 WYRVLDHLI-------PGTTKVNALKKMLLDQGGFAPCFLGCFLPLVGVLNGMSAQDNWA 121

Query:   140 DLKRDFLPALVLEGGIWPIVQVANFRYVPVRYQLLYVNIFCLLDSAFLSWVEQQ 193
              LKRD+  AL+    +WP VQ+ANF  VP+ Y+L  V    ++ +++LSW   Q
Sbjct:   122 KLKRDYPDALITNYYLWPAVQLANFYLVPLHYRLAVVQCVAVVWNSYLSWKAHQ 175

GO:0000002 "mitochondrial genome maintenance" evidence=IEA

GO:0005777 "peroxisome" evidence=IEA

GO:0032836 "glomerular basement membrane development" evidence=IEA

GO:0034614 "cellular response to reactive oxygen species" evidence=IEA

GO:0042592 "homeostatic process" evidence=IEA

GO:0048839 "inner ear development" evidence=IEA

GO:0072593 "reactive oxygen species metabolic process" evidence=IEA

GO:2000377 "regulation of reactive oxygen species metabolic process" evidence=IEA

UNIPROTKB|Q2KIN6 MPV17 "Protein Mpv17" [Bos taurus (taxid:9913)]

 Score = 139 (54.0 bits), Expect = 2.1e-18, Sum P(2) = 2.1e-18
 Identities = 37/110 (33%), Positives = 54/110 (49%)

Query:    81 WYEGLDRFIRLKLQLPPKSARFVATK-VAMDSIIFGPLDLFVFFTYMGFSTGKNVAQVKE 139
             WY  LDR I       P + +  A K + +D   F P  L  F   +G   G +      
Sbjct:    69 WYRVLDRLI-------PGTTKVDALKKMLLDQGGFAPCFLGCFLPLVGTLNGLSAQDNWA 121

Query:   140 DLKRDFLPALVLEGGIWPIVQVANFRYVPVRYQLLYVNIFCLLDSAFLSW 189
              L+RDF  AL+    +WP VQ+ANF  VP+ Y+L  V    ++ +++LSW
Sbjct:   122 KLQRDFPDALITNYYLWPAVQLANFYLVPLHYRLAVVQCVAVIWNSYLSW 171

GO:0005743 "mitochondrial inner membrane" evidence=IEA

GO:2000377 "regulation of reactive oxygen species metabolic process" evidence=IEA

GO:0072593 "reactive oxygen species metabolic process" evidence=IEA

GO:0048839 "inner ear development" evidence=IEA

GO:0042592 "homeostatic process" evidence=IEA

GO:0034614 "cellular response to reactive oxygen species" evidence=IEA

GO:0032836 "glomerular basement membrane development" evidence=IEA

GO:0005777 "peroxisome" evidence=IEA

GO:0000002 "mitochondrial genome maintenance" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

SGD|S000004241 SYM1 "Protein required for ethanol metabolism" [Saccharomyces cerevisiae (taxid:4932)]

 Score = 198 (74.8 bits), Expect = 7.7e-16, P = 7.7e-16
 Identities = 51/188 (27%), Positives = 91/188 (48%)

Query:     2 LKLWKWYQNCLAVHPLKTQVISSGFLWGVGDIAAQYITHATAKSRLQLSDADEKFKVNWK 61
             +KL   Y+  L   P  T  I +G L+G+GD++AQ +   T+K        ++ +  ++K
Sbjct:     1 MKLLHLYEASLKRRPKTTNAIMTGALFGIGDVSAQLL-FPTSK-------VNKGY--DYK 50

Query:    62 RXXXXXXXXXXXXXXXXXXWYEGLDRFIRLKLQLPPKSARFVATKVAMDSIIFGPLDLFV 121
             R                  WY+ L+  I ++ + P      +  +VA+D + F PL L  
Sbjct:    51 RTARAVIYGSLIFSFIGDKWYKILNNKIYMRNR-PQYHWSNMVLRVAVDQLAFAPLGLPF 109

Query:   122 FFTYMGFSTGKNVAQVKEDLKRDFLPALVLEGGIWPIVQVANFRYVPVRYQLLYVNIFCL 181
             +FT M    G++    K  +K  + P L+    +WP+ Q  NF  VP++++LL VN+  +
Sbjct:   110 YFTCMSIMEGRSFDVAKLKIKEQWWPTLLTNWAVWPLFQAINFSVVPLQHRLLAVNVVAI 169

Query:   182 LDSAFLSW 189
               + +LS+
Sbjct:   170 FWNTYLSY 177

GO:0005743 "mitochondrial inner membrane" evidence=IEA;IDA

GO:0016021 "integral to membrane" evidence=IEA;ISM

GO:0016020 "membrane" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA;IDA

GO:0006067 "ethanol metabolic process" evidence=IMP

GO:0003674 "molecular_function" evidence=ND

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q5BK62	MPV17_RAT	No assigned EC number	0.3333	0.8064	0.9943	yes	no
Q54XX9	PX24B_DICDI	No assigned EC number	0.3230	0.8387	0.9430	yes	no
P19258	MPV17_MOUSE	No assigned EC number	0.3437	0.8064	0.9943	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: gw1.XVIII.2415.1 hypothetical protein (215 aa) (Populus trichocarpa)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	217
pfam04117	68	pfam04117, Mpv17_PMP22, Mpv17 / PMP22 family	1e-16

>gnl|CDD|202894 pfam04117, Mpv17_PMP22, Mpv17 / PMP22 family

 Score = 71.1 bits (175), Expect = 1e-16
 Identities = 27/68 (39%), Positives = 42/68 (61%)

Query: 126 MGFSTGKNVAQVKEDLKRDFLPALVLEGGIWPIVQVANFRYVPVRYQLLYVNIFCLLDSA 185
           MG   GK++ ++KE LK  F P L     +WP VQ  NF +VPV Y++L+VN+  +  + 
Sbjct: 1   MGLLEGKSLEEIKEKLKEKFWPTLKANWKVWPPVQFINFAFVPVHYRVLFVNLVGIGWNT 60

Query: 186 FLSWVEQQ 193
           +LS+V  +
Sbjct: 61  YLSYVNNK 68

The 22-kDa peroxisomal membrane protein (PMP22) is a major component of peroxisomal membranes. PMP22 seems to be involved in pore forming activity and may contribute to the unspecific permeability of the organelle membrane. PMP22 is synthesised on free cytosolic ribosomes and then directed to the peroxisome membrane by specific targeting information. Mpv17 is a closely related peroxisomal protein. In mouse, the Mpv17 protein is involved in the development of early-onset glomerulosclerosis. More recently a homolog of Mpv17 in S. cerevisiae has been been found to be an integral membrane protein of the inner mitochondrial membrane where it has been proposed to have a role in ethanol metabolism and tolerance during heat-shock. Defects in MPV17 is associated with mitochondrial DNA depletion syndrome (MDDS) and Navajo neurohepatopathy (NNH). MDDS is a clinically heterogeneous group of disorders characterized by a reduction in mitochondrial DNA (mtDNA) copy number. Primary mtDNA depletion is inherited as an autosomal recessive trait and may affect single organs, typically muscle or liver, or multiple tissues. Individuals with the hepatocerebral form of mitochondrial DNA depletion syndrome have early progressive liver failure and neurologic abnormalities, hypoglycemia, and increased lactate in body fluids. NNH is an autosomal recessive disease that is prevalent among Navajo children in the South Western states of America. The major clinical features are hepatopathy, peripheral neuropathy, corneal anesthesia and scarring, acral mutilation, cerebral leukoencephalopathy, failure to thrive, and recurrent metabolic acidosis with intercurrent infections. Infantile, childhood, and classic forms of NNH have been described. Mitochondrial DNA depletion was detected in the livers of patients, suggesting a primary defect in mtDNA maintenance. Length = 68

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	217
KOG1944	222	consensus Peroxisomal membrane protein MPV17 and r	100.0
PF04117	68	Mpv17_PMP22: Mpv17 / PMP22 family ; InterPro: IPR0	99.92

>KOG1944 consensus Peroxisomal membrane protein MPV17 and related proteins [General function prediction only]

Probab=100.00  E-value=1e-41  Score=283.91  Aligned_cols=168  Identities=36%  Similarity=0.650  Sum_probs=157.9

Q ss_pred             HhhCchHHHHHHHHHHH-HHHHHHHhhhhhhhhhhhhccccccccccchHHHHHHHHhhcccccchhHHHHHHHHHHHhh
Q 027921           12 LAVHPLKTQVISSGFLW-GVGDIAAQYITHATAKSRLQLSDADEKFKVNWKRVAVTSSFGFGFVGPVGHFWYEGLDRFIR   90 (217)
Q Consensus        12 l~~~Pl~tk~~ts~~l~-~~gD~laQ~~~~~~~~~~~~~~~~~~~~~~D~~R~~~~~~~G~~~~gP~~h~wy~~Ld~~~~   90 (217)
                      ...+|+++++++++.+. .+||+++|.++.....        . ...+|+.|++||+++|+++.||.+|+||..||+++|
T Consensus        46 ~~~~~~l~~~i~~~~~~~~~~d~~~q~~~~~~~~--------~-~~~~d~~rtlr~~~~G~~f~gp~~~~Wy~~L~~~~p  116 (222)
T KOG1944|consen   46 FSLYPLLTKAITTSLLLAAAGDVISQSLEGRSKK--------L-FQTLDLTRTLRMGIFGFLFVGPTLHYWYRLLSKLFP  116 (222)
T ss_pred             hhhhhHHHHHHHHHHHHHHhchhhhhhhhhhccc--------c-cccccHHHHHHHHhhhhheeccchhHHHHHHHHHcc
Confidence            35689999999998888 9999999999987531        0 468999999999999988999999999999999996


Q ss_pred             hhcCCCCCchHHHHHHHHhhhhhhhhhHHHHHHHHHHhhCCCChHHHHHHHHhhhHHHHHhccccchhhhhhheeeecCc
Q 027921           91 LKLQLPPKSARFVATKVAMDSIIFGPLDLFVFFTYMGFSTGKNVAQVKEDLKRDFLPALVLEGGIWPIVQVANFRYVPVR  170 (217)
Q Consensus        91 ~~~~~~~~~~~~~~~Kvl~DQ~v~~P~~~~~f~~~~~~l~g~s~~~~~~~lk~~~~~~l~~~~~~Wp~~q~inF~~VP~~  170 (217)
                            .++..++++|+++||++++|+.+.+||.+++++||++.+++.++++++++|++++||++||++|++||++||++
T Consensus       117 ------~~~~~~~~~kvl~dql~~~P~~~~~ff~~~~~legk~~~~~~~~~~~~~~p~l~~~~~~WP~~q~inF~~VP~~  190 (222)
T KOG1944|consen  117 ------KKTLITVVKKVLLDQLVFAPLFIVVFFLLMGLLEGKTNEEAKAKLKRKFWPTLKANWMVWPLVQFINFRLVPLQ  190 (222)
T ss_pred             ------CccHHHHHHHHHHhhhhhchHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHhhhheecchhheeeeEEcccc
Confidence                  56889999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cchhhhhHHHHHHHHHHHHhhccc
Q 027921          171 YQLLYVNIFCLLDSAFLSWVEQQK  194 (217)
Q Consensus       171 ~Rvlf~n~v~~~W~~yLS~~~~~~  194 (217)
                      +|++++|+++++||+|||+++++.
T Consensus       191 ~rvl~~~~vsl~W~~~Ls~~~~~~  214 (222)
T KOG1944|consen  191 YRVLFVNIVSLVWNTYLSYKNASL  214 (222)
T ss_pred             ceehhhhhHHHHHHHHHHHHhhcc
Confidence            999999999999999999999998

>PF04117 Mpv17_PMP22: Mpv17 / PMP22 family ; InterPro: IPR007248 The 22 kDa peroxisomal membrane protein (PMP22) is a major component of peroxisomal membranes

Probab=99.92  E-value=9.6e-26  Score=154.78  Aligned_cols=68  Identities=40%  Similarity=0.820  Sum_probs=66.4

Q ss_pred             HHhhCCCChHHHHHHHHhhhHHHHHhccccchhhhhhheeeecCccchhhhhHHHHHHHHHHHHhhcc
Q 027921          126 MGFSTGKNVAQVKEDLKRDFLPALVLEGGIWPIVQVANFRYVPVRYQLLYVNIFCLLDSAFLSWVEQQ  193 (217)
Q Consensus       126 ~~~l~g~s~~~~~~~lk~~~~~~l~~~~~~Wp~~q~inF~~VP~~~Rvlf~n~v~~~W~~yLS~~~~~  193 (217)
                      |+++||++++++++++|++|+++++++|++|||+|++||+|||+++|++|+|+++++||+|||+++||
T Consensus         1 Mg~l~g~s~~~~~~~l~~~~~~~~~~~~~~Wp~~~~vnF~~vP~~~Rv~~~~~v~~~W~~~LS~~~~r   68 (68)
T PF04117_consen    1 MGLLEGKSWEEIKEKLKRDYWPTLKASWKFWPPAQIVNFRYVPPHYRVLFVNVVSFFWNTYLSYIANR   68 (68)
T ss_pred             CCcccCCCHHHHHHHHHHHHHHHHHHHhHhHHHHHHHHhcccChhhhhhhhhhHHHHHHHHHHHHhcC
Confidence            57899999999999999999999999999999999999999999999999999999999999999986

PMP22 seems to be involved in pore-forming activity and may contribute to the unspecific permeability of the organelle membrane. PMP22 is synthesised on free cytosolic ribosomes and then directed to the peroxisome membrane by specific targeting information []. Mpv17 is a closely related peroxisomal protein involved in the development of early-onset glomerulosclerosis []. A member of this family found in Saccharomyces cerevisiae (Baker's yeast) is an integral membrane protein of the inner mitochondrial membrane and has been suggested to play a role in mitochondrial function during heat shock [].; GO: 0016021 integral to membrane

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00