Citrus Sinensis ID: 027961

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210------
MGTPTREQYVYLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAYKNVIGSLRAAWRIISSIEQKEEGRKNEEHVSLVKDYRSKVESELSDVCGSILKLLDSHLVPSATAGESKVFYLKMKGDYYRYLAEFKVGDERKAAAENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQEKTLTRLVSPFLGF
ccccHHHHHHHHHHHHHHHccHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccHHEEEEcccccccEEccccccHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHccccccc
cccccHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHcccHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHcccccccc
MGTPTREQYVYLAKLAEQAERYEEMVKFMDSLvtsstpateltVEERNLLSVAYKNVIGSLRAAWRIISSIEQkeegrkneeHVSLVKDYRSKVESELSDVCGSILKLldshlvpsatagesKVFYLKMKGDYYRYLAEFKVGDERKAAAENTMLSYKAAQDialtdlapthpirlgLALNFSVFYYEILNSSEKACTMAKQEKTLTRLVSPFLGF
mgtptreqyVYLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAYKNVIGSLRAAWRIISSieqkeegrkneehvslVKDYRSKVESELSDVCGSILKLLdshlvpsatageskvfYLKMKGDYYRYLAEFKVGDERKAAAENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMakqektltrlvspflgf
MGTPTREQYVYLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAYKNVIGSLRAAWRIISSIEQKEEGRKNEEHVSLVKDYRSKVESELSDVCGSILKLLDSHLVPSATAGESKVFYLKMKGDYYRYLAEFKVGDERKAAAENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQEKTLTRLVSPFLGF
********YVYLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAYKNVIGSLRAAWRIISSI*************************ELSDVCGSILKLLDSHLVPSATAGESKVFYLKMKGDYYRYLAEFKVGDERKAAAENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACT******************
****TRE*YVYLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAYKNVIGSLRAAWRII*****************LVKDYRSKVESELSDVCGSILKLLDSHLVPSATAGESKVFYLKMKGDYYRYLAEFKVGDERKAAAENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQEKTLTRLVSPFL**
MGTPTREQYVYLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAYKNVIGSLRAAWRIISSIEQ***********SLVKDYRSKVESELSDVCGSILKLLDSHLVPSATAGESKVFYLKMKGDYYRYLAEFKVGDERKAAAENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQEKTLTRLVSPFLGF
*****REQYVYLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAYKNVIGSLRAAWRIISSIEQKEEGRKNEEHVSLVKDYRSKVESELSDVCGSILKLLDSHLVPSATAGESKVFYLKMKGDYYRYLAEFKVGDERKAAAENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQEKTLTRLVSPFLGF
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiii
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MGTPTREQYVYxxxxxxxxxxxxxxxxxxxxxVTSSTPATELTVEERNLLSVAYKNVIGSLRAAWRIISSIEQKEEGRKNEEHVSLVKDYRSKVESELSDVCGSILKLLDSHLVPSATAGESKVFYLKMKGDYYRYLAEFKVGDERKAAAENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQEKTLTRLVSPFLGF
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query216 2.2.26 [Sep-21-2011]
P48348248 14-3-3-like protein GF14 yes no 0.925 0.806 0.845 2e-99
P48349248 14-3-3-like protein GF14 no no 0.930 0.810 0.845 2e-98
O49996249 14-3-3-like protein D OS= N/A no 0.930 0.807 0.843 6e-97
P93206249 14-3-3 protein 1 OS=Solan N/A no 0.930 0.807 0.839 2e-96
P93207252 14-3-3 protein 10 OS=Sola N/A no 0.916 0.785 0.848 2e-95
Q96451247 14-3-3-like protein B (Fr yes no 0.916 0.801 0.828 2e-94
Q6ZKC0256 14-3-3-like protein GF14- yes no 0.912 0.769 0.772 2e-87
Q01526261 14-3-3-like protein GF14- N/A no 0.912 0.754 0.767 2e-86
Q9SP07259 14-3-3-like protein OS=Li N/A no 0.916 0.764 0.763 2e-86
P49106261 14-3-3-like protein GF14- N/A no 0.912 0.754 0.762 2e-86
>sp|P48348|14338_ARATH 14-3-3-like protein GF14 kappa OS=Arabidopsis thaliana GN=GRF8 PE=2 SV=2 Back     alignment and function desciption
 Score =  361 bits (926), Expect = 2e-99,   Method: Compositional matrix adjust.
 Identities = 169/200 (84%), Positives = 188/200 (94%)

Query: 3   TPTREQYVYLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAYKNVIGSLR 62
           T +R+QYVY+AKLAEQAERYEEMV+FM+ LV+ +TPA ELTVEERNLLSVAYKNVIGSLR
Sbjct: 4   TLSRDQYVYMAKLAEQAERYEEMVQFMEQLVSGATPAGELTVEERNLLSVAYKNVIGSLR 63

Query: 63  AAWRIISSIEQKEEGRKNEEHVSLVKDYRSKVESELSDVCGSILKLLDSHLVPSATAGES 122
           AAWRI+SSIEQKEE RKNEEHVSLVKDYRSKVE+ELS +C  IL+LLDSHL+PSATA ES
Sbjct: 64  AAWRIVSSIEQKEESRKNEEHVSLVKDYRSKVETELSSICSGILRLLDSHLIPSATASES 123

Query: 123 KVFYLKMKGDYYRYLAEFKVGDERKAAAENTMLSYKAAQDIALTDLAPTHPIRLGLALNF 182
           KVFYLKMKGDY+RYLAEFK GDERK AAE+TM++YKAAQD+A+ DLAPTHPIRLGLALNF
Sbjct: 124 KVFYLKMKGDYHRYLAEFKSGDERKTAAEDTMIAYKAAQDVAVADLAPTHPIRLGLALNF 183

Query: 183 SVFYYEILNSSEKACTMAKQ 202
           SVFYYEILNSSEKAC+MAKQ
Sbjct: 184 SVFYYEILNSSEKACSMAKQ 203
Is associated with a DNA binding complex that binds to the G box, a well-characterized cis-acting DNA regulatory element found in plant genes.
Arabidopsis thaliana (taxid: 3702)
>sp|P48349|14336_ARATH 14-3-3-like protein GF14 lambda OS=Arabidopsis thaliana GN=GRF6 PE=1 SV=1 Back     alignment and function description
>sp|O49996|1433D_TOBAC 14-3-3-like protein D OS=Nicotiana tabacum PE=2 SV=1 Back     alignment and function description
>sp|P93206|14331_SOLLC 14-3-3 protein 1 OS=Solanum lycopersicum GN=TFT1 PE=3 SV=2 Back     alignment and function description
>sp|P93207|14310_SOLLC 14-3-3 protein 10 OS=Solanum lycopersicum GN=TFT10 PE=2 SV=2 Back     alignment and function description
>sp|Q96451|1433B_SOYBN 14-3-3-like protein B (Fragment) OS=Glycine max GN=GF14B PE=2 SV=1 Back     alignment and function description
>sp|Q6ZKC0|14333_ORYSJ 14-3-3-like protein GF14-C OS=Oryza sativa subsp. japonica GN=GF14C PE=1 SV=1 Back     alignment and function description
>sp|Q01526|14332_MAIZE 14-3-3-like protein GF14-12 OS=Zea mays GN=GRF2 PE=2 SV=2 Back     alignment and function description
>sp|Q9SP07|1433_LILLO 14-3-3-like protein OS=Lilium longiflorum PE=2 SV=1 Back     alignment and function description
>sp|P49106|14331_MAIZE 14-3-3-like protein GF14-6 OS=Zea mays GN=GRF1 PE=3 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query216
302122826252 14-3-3f protein [Gossypium hirsutum] 0.916 0.785 0.883 1e-98
309952069248 14-3-3-like protein GF14 Lambda [Eutrema 0.930 0.810 0.850 7e-98
297797573248 hypothetical protein ARALYDRAFT_496774 [ 0.925 0.806 0.85 8e-98
30698122248 14-3-3-like protein GF14 kappa [Arabidop 0.925 0.806 0.845 1e-97
30698124246 14-3-3-like protein GF14 kappa [Arabidop 0.925 0.813 0.845 1e-97
334188638260 14-3-3-like protein GF14 kappa [Arabidop 0.925 0.769 0.845 3e-97
255545912254 14-3-3 protein, putative [Ricinus commun 0.916 0.779 0.863 8e-97
18416277248 14-3-3-like protein GF14 lambda [Arabido 0.930 0.810 0.845 1e-96
224081971254 predicted protein [Populus trichocarpa] 0.916 0.779 0.863 1e-96
79327622246 14-3-3-like protein GF14 lambda [Arabido 0.930 0.817 0.845 1e-96
>gi|302122826|gb|ADK93079.1| 14-3-3f protein [Gossypium hirsutum] Back     alignment and taxonomy information
 Score =  364 bits (935), Expect = 1e-98,   Method: Compositional matrix adjust.
 Identities = 175/198 (88%), Positives = 188/198 (94%)

Query: 5   TREQYVYLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAYKNVIGSLRAA 64
           +R+QYVYLAKLAEQAERYEEMV+FM  LV  STPA+ELTVEERNLLSVAYKNVIGSLRAA
Sbjct: 10  SRDQYVYLAKLAEQAERYEEMVQFMQKLVLGSTPASELTVEERNLLSVAYKNVIGSLRAA 69

Query: 65  WRIISSIEQKEEGRKNEEHVSLVKDYRSKVESELSDVCGSILKLLDSHLVPSATAGESKV 124
           WRI+SSIEQKEEGRKNEEHV LVK+YRSKVESELSDVC SIL LLDS+L+PSA A ESKV
Sbjct: 70  WRIVSSIEQKEEGRKNEEHVVLVKEYRSKVESELSDVCASILTLLDSNLIPSAAASESKV 129

Query: 125 FYLKMKGDYYRYLAEFKVGDERKAAAENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSV 184
           FYLKMKGDY+RYLAEFKVGDERKAAAE+TMLSYKAAQDIALTDLAPTHPIRLGLALN+SV
Sbjct: 130 FYLKMKGDYHRYLAEFKVGDERKAAAEDTMLSYKAAQDIALTDLAPTHPIRLGLALNYSV 189

Query: 185 FYYEILNSSEKACTMAKQ 202
           FYYEILN S+KAC+MAKQ
Sbjct: 190 FYYEILNQSDKACSMAKQ 207

Source: Gossypium hirsutum

Species: Gossypium hirsutum

Genus: Gossypium

Family: Malvaceae

Order: Malvales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|309952069|gb|ADO95308.1| 14-3-3-like protein GF14 Lambda [Eutrema salsugineum] Back     alignment and taxonomy information
>gi|297797573|ref|XP_002866671.1| hypothetical protein ARALYDRAFT_496774 [Arabidopsis lyrata subsp. lyrata] gi|297312506|gb|EFH42930.1| hypothetical protein ARALYDRAFT_496774 [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|30698122|ref|NP_851274.1| 14-3-3-like protein GF14 kappa [Arabidopsis thaliana] gi|12643286|sp|P48348.2|14338_ARATH RecName: Full=14-3-3-like protein GF14 kappa; AltName: Full=General regulatory factor 8 gi|5802794|gb|AAD51783.1|AF145300_1 14-3-3 protein GF14 kappa [Arabidopsis thaliana] gi|15293125|gb|AAK93673.1| putative 14-3-3 protein GF14kappa grf8 [Arabidopsis thaliana] gi|19310701|gb|AAL85081.1| putative 14-3-3 protein GF14kappa [Arabidopsis thaliana] gi|21537301|gb|AAM61642.1| 14-3-3 protein GF14kappa (grf8) [Arabidopsis thaliana] gi|332010669|gb|AED98052.1| 14-3-3-like protein GF14 kappa [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|30698124|ref|NP_569012.2| 14-3-3-like protein GF14 kappa [Arabidopsis thaliana] gi|9759623|dbj|BAB11565.1| 14-3-3 protein GF14 [Arabidopsis thaliana] gi|110736017|dbj|BAE99981.1| GF14 Kappa isoform [Arabidopsis thaliana] gi|332010670|gb|AED98053.1| 14-3-3-like protein GF14 kappa [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|334188638|ref|NP_001190621.1| 14-3-3-like protein GF14 kappa [Arabidopsis thaliana] gi|332010671|gb|AED98054.1| 14-3-3-like protein GF14 kappa [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|255545912|ref|XP_002514016.1| 14-3-3 protein, putative [Ricinus communis] gi|223547102|gb|EEF48599.1| 14-3-3 protein, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|18416277|ref|NP_568229.1| 14-3-3-like protein GF14 lambda [Arabidopsis thaliana] gi|1345595|sp|P48349.1|14336_ARATH RecName: Full=14-3-3-like protein GF14 lambda; AltName: Full=14-3-3-like protein AFT1; AltName: Full=14-3-3-like protein RCI2; AltName: Full=General regulatory factor 6 gi|5802790|gb|AAD51781.1|AF145298_1 14-3-3 protein GF14 lambda [Arabidopsis thaliana] gi|953221|gb|AAA74737.1| 14-3-3-like protein 1 [Arabidopsis thaliana] gi|1549404|gb|AAB08482.1| GF14 lambda [Arabidopsis thaliana] gi|15450385|gb|AAK96486.1| AT5g10450/F12B17_200 [Arabidopsis thaliana] gi|16974483|gb|AAL31245.1| AT5g10450/F12B17_200 [Arabidopsis thaliana] gi|332004158|gb|AED91541.1| 14-3-3-like protein GF14 lambda [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|224081971|ref|XP_002306545.1| predicted protein [Populus trichocarpa] gi|118481637|gb|ABK92760.1| unknown [Populus trichocarpa] gi|222855994|gb|EEE93541.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|79327622|ref|NP_001031868.1| 14-3-3-like protein GF14 lambda [Arabidopsis thaliana] gi|332004159|gb|AED91542.1| 14-3-3-like protein GF14 lambda [Arabidopsis thaliana] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query216
TAIR|locus:2076904265 GRF7 "AT3G02520" [Arabidopsis 0.912 0.743 0.747 5e-76
TAIR|locus:2122323318 GRF1 "AT4G09000" [Arabidopsis 0.930 0.632 0.723 2.1e-75
UNIPROTKB|Q06967260 GF14F "14-3-3-like protein GF1 0.912 0.757 0.752 3.5e-75
TAIR|locus:2146147268 GRF5 "AT5G16050" [Arabidopsis 0.912 0.735 0.732 3.5e-75
TAIR|locus:2032060259 GRF2 "general regulatory facto 0.907 0.756 0.720 4e-74
TAIR|locus:2177386255 GRF3 "general regulatory facto 0.912 0.772 0.712 1.7e-73
DICTYBASE|DDB_G0269138252 fttB "14-3-3-like protein" [Di 0.898 0.769 0.675 2.7e-68
ZFIN|ZDB-GENE-030131-779255 ywhae1 "tyrosine 3-monooxygena 0.893 0.756 0.668 1.3e-66
CGD|CAL0001346264 BMH1 [Candida albicans (taxid: 0.902 0.738 0.661 1.7e-66
FB|FBgn0020238262 14-3-3epsilon "14-3-3epsilon" 0.893 0.736 0.668 1.7e-66
TAIR|locus:2076904 GRF7 "AT3G02520" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 766 (274.7 bits), Expect = 5.0e-76, P = 5.0e-76
 Identities = 148/198 (74%), Positives = 174/198 (87%)

Query:     5 TREQYVYLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAYKNVIGSLRAA 64
             +RE+ VYLAKLAEQAERYEEMV+FM+  V  +    ELTVEERNLLSVAYKNVIG+ RA+
Sbjct:     4 SREENVYLAKLAEQAERYEEMVEFMEK-VAKTVDTDELTVEERNLLSVAYKNVIGARRAS 62

Query:    65 WRIISSIEQKEEGRKNEEHVSLVKDYRSKVESELSDVCGSILKLLDSHLVPSATAGESKV 124
             WRIISSIEQKEE R N++HVS++KDYR K+E+ELS +C  IL LLDSHLVP+A+  ESKV
Sbjct:    63 WRIISSIEQKEESRGNDDHVSIIKDYRGKIETELSKICDGILNLLDSHLVPTASLAESKV 122

Query:   125 FYLKMKGDYYRYLAEFKVGDERKAAAENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSV 184
             FYLKMKGDY+RYLAEFK G ERK AAE+T+++YK+AQDIAL DLAPTHPIRLGLALNFSV
Sbjct:   123 FYLKMKGDYHRYLAEFKTGAERKEAAESTLVAYKSAQDIALADLAPTHPIRLGLALNFSV 182

Query:   185 FYYEILNSSEKACTMAKQ 202
             FYYEILNS ++AC++AKQ
Sbjct:   183 FYYEILNSPDRACSLAKQ 200
GO:0005635 "nuclear envelope" evidence=IDA
GO:0005737 "cytoplasm" evidence=ISM;IDA
GO:0005886 "plasma membrane" evidence=IDA
GO:0019904 "protein domain specific binding" evidence=IEA
GO:0045309 "protein phosphorylated amino acid binding" evidence=TAS
GO:0009507 "chloroplast" evidence=IDA
GO:0005829 "cytosol" evidence=RCA
GO:0009506 "plasmodesma" evidence=IDA
GO:0005794 "Golgi apparatus" evidence=IDA
GO:0006486 "protein glycosylation" evidence=RCA
GO:0006888 "ER to Golgi vesicle-mediated transport" evidence=RCA
GO:0009407 "toxin catabolic process" evidence=RCA
GO:0043090 "amino acid import" evidence=RCA
GO:0009570 "chloroplast stroma" evidence=IDA
TAIR|locus:2122323 GRF1 "AT4G09000" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
UNIPROTKB|Q06967 GF14F "14-3-3-like protein GF14-F" [Oryza sativa Japonica Group (taxid:39947)] Back     alignment and assigned GO terms
TAIR|locus:2146147 GRF5 "AT5G16050" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2032060 GRF2 "general regulatory factor 2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2177386 GRF3 "general regulatory factor 3" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
DICTYBASE|DDB_G0269138 fttB "14-3-3-like protein" [Dictyostelium discoideum (taxid:44689)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-030131-779 ywhae1 "tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide 1" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
CGD|CAL0001346 BMH1 [Candida albicans (taxid:5476)] Back     alignment and assigned GO terms
FB|FBgn0020238 14-3-3epsilon "14-3-3epsilon" [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
P42656RAD24_SCHPONo assigned EC number0.64850.92120.7370yesno
Q964511433B_SOYBNNo assigned EC number0.82820.91660.8016yesno
P426531433A_VICFANo assigned EC number0.7450.91660.7586N/Ano
P4265214334_SOLLCNo assigned EC number0.71780.93050.7730N/Ano
P921771433E_DROMENo assigned EC number0.66830.89350.7366yesno
O653521433_HELANNo assigned EC number0.75630.91200.7606N/Ano
Q4141814331_SOLTUNo assigned EC number0.73360.90740.7567N/Ano
Q434701433B_HORVUNo assigned EC number0.74140.93050.7671N/Ano
Q4364314332_SOLTUNo assigned EC number0.70790.92120.7834N/Ano
P4910614331_MAIZENo assigned EC number0.76260.91200.7547N/Ano
P34730BMH2_YEASTNo assigned EC number0.66830.90270.7142yesno
P529081433_CHLRENo assigned EC number0.72580.90740.7567N/Ano
P622601433E_RATNo assigned EC number0.65810.89350.7568yesno
P9321114336_SOLLCNo assigned EC number0.73760.93050.7790N/Ano
P932591433_MESCRNo assigned EC number0.74240.91200.7462N/Ano
P546321433_DICDINo assigned EC number0.67510.89810.7698yesno
P933431433C_TOBACNo assigned EC number0.7450.91660.7615N/Ano
P933421433A_TOBACNo assigned EC number0.72770.92120.7803N/Ano
P9378414335_SOLTUNo assigned EC number0.73760.93050.7790N/Ano
Q9SP071433_LILLONo assigned EC number0.76380.91660.7644N/Ano
P4834914336_ARATHNo assigned EC number0.84570.93050.8104nono
P4834814338_ARATHNo assigned EC number0.8450.92590.8064yesno
P462661433_PEANo assigned EC number0.730.91660.7615N/Ano
Q0152614332_MAIZENo assigned EC number0.76760.91200.7547N/Ano
O499981433F_TOBACNo assigned EC number0.720.92590.7751N/Ano
P9321014335_SOLLCNo assigned EC number0.70290.92590.7843N/Ano
Q6ZKC014333_ORYSJNo assigned EC number0.77270.91200.7695yesno
O499961433D_TOBACNo assigned EC number0.84390.93050.8072N/Ano
O499971433E_TOBACNo assigned EC number0.73760.93050.7389N/Ano
O499951433B_TOBACNo assigned EC number0.75120.91200.7725N/Ano
P9320814332_SOLLCNo assigned EC number0.76640.90740.7716N/Ano
P9320914333_SOLLCNo assigned EC number0.730.91660.7615N/Ano
P9320614331_SOLLCNo assigned EC number0.83900.93050.8072N/Ano
P9320714310_SOLLCNo assigned EC number0.84840.91660.7857N/Ano
P293051433A_HORVUNo assigned EC number0.74740.91200.7519N/Ano
P293071433_OENEHNo assigned EC number0.74110.90740.7538N/Ano

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
fgenesh2_kg.8__2590__AT5G65430.1
annotation not avaliable (248 aa)
(Arabidopsis lyrata)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query216
pfam00244236 pfam00244, 14-3-3, 14-3-3 protein 1e-119
smart00101244 smart00101, 14_3_3, 14-3-3 homologues 1e-112
cd10026237 cd10026, 14-3-3_plant, Plant 14-3-3 protein domain 1e-108
cd08774225 cd08774, 14-3-3, 14-3-3 domain 1e-104
cd11309231 cd11309, 14-3-3_fungi, Fungal 14-3-3 protein domai 7e-98
COG5040268 COG5040, BMH1, 14-3-3 family protein [Signal trans 1e-96
cd10020230 cd10020, 14-3-3_epsilon, 14-3-3 epsilon, an isofor 2e-94
cd10023234 cd10023, 14-3-3_theta, 14-3-3 theta/tau (theta in 2e-77
cd11310230 cd11310, 14-3-3_1, 14-3-3 protein domain 1e-75
cd10022229 cd10022, 14-3-3_beta_zeta, 14-3-3 beta and zeta is 2e-73
cd10019242 cd10019, 14-3-3_sigma, 14-3-3 sigma, an isoform of 5e-71
cd10024246 cd10024, 14-3-3_gamma, 14-3-3 gamma, an isoform of 1e-64
cd10025239 cd10025, 14-3-3_eta, 14-3-3 eta, an isoform of 14- 6e-64
>gnl|CDD|215815 pfam00244, 14-3-3, 14-3-3 protein Back     alignment and domain information 
 Score =  337 bits (867), Expect = e-119
 Identities = 137/197 (69%), Positives = 161/197 (81%), Gaps = 3/197 (1%)

Query: 6   REQYVYLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAYKNVIGSLRAAW 65
           RE+ VYLAKLAEQAERY++MV+ M  +V       EL+VEERNLLSVAYKNVIG+ RA+W
Sbjct: 1   REELVYLAKLAEQAERYDDMVEAMKKVVELKE---ELSVEERNLLSVAYKNVIGARRASW 57

Query: 66  RIISSIEQKEEGRKNEEHVSLVKDYRSKVESELSDVCGSILKLLDSHLVPSATAGESKVF 125
           RIISSIEQKEE + NE+ V L+K+YR KVE EL ++C  IL+LLD HL+P A++ ESKVF
Sbjct: 58  RIISSIEQKEESKGNEKKVKLIKEYRKKVEEELINICNDILELLDKHLIPKASSPESKVF 117

Query: 126 YLKMKGDYYRYLAEFKVGDERKAAAENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVF 185
           YLKMKGDYYRYLAEF  GDERK AA+  + +YKAA +IA  +L PTHPIRLGLALNFSVF
Sbjct: 118 YLKMKGDYYRYLAEFASGDERKEAADKALEAYKAALEIAEKELPPTHPIRLGLALNFSVF 177

Query: 186 YYEILNSSEKACTMAKQ 202
           YYEILNS EKAC +AKQ
Sbjct: 178 YYEILNSPEKACELAKQ 194

Length = 236
>gnl|CDD|128412 smart00101, 14_3_3, 14-3-3 homologues Back     alignment and domain information
>gnl|CDD|206762 cd10026, 14-3-3_plant, Plant 14-3-3 protein domain Back     alignment and domain information
>gnl|CDD|206755 cd08774, 14-3-3, 14-3-3 domain Back     alignment and domain information
>gnl|CDD|206763 cd11309, 14-3-3_fungi, Fungal 14-3-3 protein domain Back     alignment and domain information
>gnl|CDD|227373 COG5040, BMH1, 14-3-3 family protein [Signal transduction mechanisms] Back     alignment and domain information
>gnl|CDD|206757 cd10020, 14-3-3_epsilon, 14-3-3 epsilon, an isoform of 14-3-3 protein Back     alignment and domain information
>gnl|CDD|206759 cd10023, 14-3-3_theta, 14-3-3 theta/tau (theta in mice, tau in human), an isoform of 14-3-3 protein Back     alignment and domain information
>gnl|CDD|206764 cd11310, 14-3-3_1, 14-3-3 protein domain Back     alignment and domain information
>gnl|CDD|206758 cd10022, 14-3-3_beta_zeta, 14-3-3 beta and zeta isoforms of 14-3-3 protein Back     alignment and domain information
>gnl|CDD|206756 cd10019, 14-3-3_sigma, 14-3-3 sigma, an isoform of 14-3-3 protein Back     alignment and domain information
>gnl|CDD|206760 cd10024, 14-3-3_gamma, 14-3-3 gamma, an isoform of 14-3-3 protein Back     alignment and domain information
>gnl|CDD|206761 cd10025, 14-3-3_eta, 14-3-3 eta, an isoform of 14-3-3 protein Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 216
COG5040268 BMH1 14-3-3 family protein [Signal transduction me 100.0
smart00101244 14_3_3 14-3-3 homologues. 14-3-3 homologues mediat 100.0
PF00244236 14-3-3: 14-3-3 protein; InterPro: IPR023410 The 14 100.0
KOG0841247 consensus Multifunctional chaperone (14-3-3 family 100.0
PF1342478 TPR_12: Tetratricopeptide repeat; PDB: 3RO2_A 3Q15 96.82
KOG1840 508 consensus Kinesin light chain [Cytoskeleton] 95.33
PF1286294 Apc5: Anaphase-promoting complex subunit 5 94.45
TIGR00990615 3a0801s09 mitochondrial precursor proteins import 93.01
PF1341469 TPR_11: TPR repeat; PDB: 2HO1_B 2FI7_B 2DBA_A 3Q4A 87.67
KOG1840508 consensus Kinesin light chain [Cytoskeleton] 86.96
PF04781111 DUF627: Protein of unknown function (DUF627); Inte 84.37
PF1337442 TPR_10: Tetratricopeptide repeat; PDB: 3CEQ_B 3EDT 81.68
PF1342478 TPR_12: Tetratricopeptide repeat; PDB: 3RO2_A 3Q15 80.91
>COG5040 BMH1 14-3-3 family protein [Signal transduction mechanisms] Back     alignment and domain information 
Probab=100.00  E-value=1.5e-82  Score=524.47  Aligned_cols=209  Identities=64%  Similarity=0.992  Sum_probs=204.4

Q ss_pred             CcHHhHHHHHHHHHHhCCHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHHhhhhhhHHHHHHHhHhhhhhccCchhh
Q 027961            4 PTREQYVYLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAYKNVIGSLRAAWRIISSIEQKEEGRKNEEH   83 (216)
Q Consensus         4 ~~r~~li~~Aklaeq~ery~Dm~~~mk~~~~~~~~~~~Ls~eERnLlsvayKn~i~~~R~s~r~l~~~eqk~~~~~~~~~   83 (216)
                      ..|++.+|+|+|++|||||+||++.||.++.  . +.+|+.+|||||||||||+||+||+|||++++++||++++|++.+
T Consensus         3 ~~rE~svylAkLaeqAERYe~MvenMk~vas--~-~~eLsVeeRNLlSVAYKNvigaRRaSWRivsSieQKeEsk~~~~q   79 (268)
T COG5040           3 TSREDSVYLAKLAEQAERYEEMVENMKLVAS--S-GQELSVEERNLLSVAYKNVIGARRASWRIVSSIEQKEESKGNTHQ   79 (268)
T ss_pred             chHHHHHHHHHHHHHHHHHHHHHHHHHHHhh--c-cchhhHHHHHHHHHHHHHHhhhhhhhhhhhhhHHHHHhcCCChhH
Confidence            3599999999999999999999999999996  3 599999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCchHhHHhhhhcccchhhhhcccchhHHHHHHHHHHHHHHHHHH
Q 027961           84 VSLVKDYRSKVESELSDVCGSILKLLDSHLVPSATAGESKVFYLKMKGDYYRYLAEFKVGDERKAAAENTMLSYKAAQDI  163 (216)
Q Consensus        84 ~~~i~~yr~ki~~EL~~~c~eil~lid~~Lip~~~~~eskvfy~KmkgDyyRYlaE~~~~~~~~~~~~~a~~aY~~A~~~  163 (216)
                      +.+|++||++|++||..||+||+++|+++|||.+++.|++|||+|||||||||+|||..|+.++++.+.+.++|+.|.++
T Consensus        80 v~lI~eyrkkiE~EL~~icddiL~vl~~hlipaa~~~EskvFyyKMKGDYyRYlAEf~~G~~~~e~a~~slE~YK~Asei  159 (268)
T COG5040          80 VELIKEYRKKIETELTKICDDILSVLEKHLIPAATTGESKVFYYKMKGDYYRYLAEFSVGEAREEAADSSLEAYKAASEI  159 (268)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccceEEEEeecchHHHHHHHhccchHhHHHHHhHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HhhcCCCCCchhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhhcCCCC
Q 027961          164 ALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQEKTLTRLVSPFLG  215 (216)
Q Consensus       164 a~~~L~pt~pirLgL~LN~SVF~yEi~~~~~~A~~iAk~Afd~ai~~~~~l~  215 (216)
                      |..+||||||||||||||||||||||+|+|++||-+||+|||+||+++|+|.
T Consensus       160 A~teLpPT~PirLGLALNfSVFyYEIlnspdkAC~lAKqaFDeAI~ELDtLS  211 (268)
T COG5040         160 ATTELPPTHPIRLGLALNFSVFYYEILNSPDKACHLAKQAFDEAISELDTLS  211 (268)
T ss_pred             hhccCCCCCchhhhheecceeeeeecccCcHHHHHHHHHHHHHHHHHHhhhh
Confidence            9999999999999999999999999999999999999999999999999984

>smart00101 14_3_3 14-3-3 homologues Back     alignment and domain information
>PF00244 14-3-3: 14-3-3 protein; InterPro: IPR023410 The 14-3-3 proteins are a large family of approximately 30kDa acidic proteins which exist primarily as homo- and heterodimeric within all eukaryotic cells [, ] Back     alignment and domain information
>KOG0841 consensus Multifunctional chaperone (14-3-3 family) [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PF13424 TPR_12: Tetratricopeptide repeat; PDB: 3RO2_A 3Q15_A 3ASG_A 3ASD_A 3AS5_A 3AS4_A 3ASH_B 4A1S_B 3CEQ_B 3EDT_H Back     alignment and domain information
>KOG1840 consensus Kinesin light chain [Cytoskeleton] Back     alignment and domain information
>PF12862 Apc5: Anaphase-promoting complex subunit 5 Back     alignment and domain information
>TIGR00990 3a0801s09 mitochondrial precursor proteins import receptor (72 kDa mitochondrial outermembrane protein) (mitochondrial import receptor for the ADP/ATP carrier) (translocase of outermembrane tom70) Back     alignment and domain information
>PF13414 TPR_11: TPR repeat; PDB: 2HO1_B 2FI7_B 2DBA_A 3Q4A_B 2C2L_D 3Q47_B 3Q49_B 2PL2_B 3IEG_B 2FBN_A Back     alignment and domain information
>KOG1840 consensus Kinesin light chain [Cytoskeleton] Back     alignment and domain information
>PF04781 DUF627: Protein of unknown function (DUF627); InterPro: IPR006866 This domain represents the N-terminal region of several plant proteins of unknown function Back     alignment and domain information
>PF13374 TPR_10: Tetratricopeptide repeat; PDB: 3CEQ_B 3EDT_H 3NF1_A Back     alignment and domain information
>PF13424 TPR_12: Tetratricopeptide repeat; PDB: 3RO2_A 3Q15_A 3ASG_A 3ASD_A 3AS5_A 3AS4_A 3ASH_B 4A1S_B 3CEQ_B 3EDT_H Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query216
3axy_C240 Structure Of Florigen Activation Complex Consisting 4e-89
4dx0_A243 Structure Of The 14-3-3PMA2 COMPLEX STABILIZED BY A 8e-86
3m50_A240 Structure Of The 14-3-3PMA2 COMPLEX STABILIZED BY E 1e-84
2o98_A242 Structure Of The 14-3-3 H+-Atpase Plant Complex Len 1e-84
1o9c_A260 Structural View Of A Fungal Toxin Acting On A 14-3- 1e-84
3ubw_A261 Complex Of 14-3-3 Isoform Epsilon, A Mlf1 Phosphope 4e-73
2br9_A234 14-3-3 Protein Epsilon (Human) Complexed To Peptide 4e-73
3ual_A232 Crystal Structure Of 14-3-3 Epsilon With Mlf1 Pepti 4e-73
2npm_A260 Crystal Structure Of Cryptosporidium Parvum 14-3-3 4e-68
4fj3_A235 14-3-3 Isoform Zeta In Complex With A Diphoyphoryla 1e-62
2v7d_A247 14-3-3 Protein Zeta In Complex With Thr758 Phosphor 5e-62
2bq0_A245 14-3-3 Protein Beta (Human) Length = 245 1e-61
3smo_A235 Crystal Structure Of Human 14-3-3 Sigma C38vN166H I 1e-61
3p1r_A236 Crystal Structure Of Human 14-3-3 Sigma C38vN166H I 1e-61
2btp_A256 14-3-3 Protein Theta (Human) Complexed To Peptide L 2e-61
2c1j_A258 Molecular Basis For The Recognition Of Phosphorylat 2e-61
1a38_A245 14-3-3 Protein Zeta Bound To R18 Peptide Length = 2 2e-61
3rdh_A248 X-Ray Induced Covalent Inhibition Of 14-3-3 Length 2e-61
2o02_A230 Phosphorylation Independent Interactions Between 14 2e-61
3p1p_A236 Crystal Structure Of Human 14-3-3 Sigma C38nN166H I 7e-61
3lw1_A253 Binary Complex Of 14-3-3 Sigma And P53 Pt387-Peptid 2e-60
4gnt_A245 Complex Of Chrebp And 14-3-3beta Length = 245 3e-60
3o8i_A239 Structure Of 14-3-3 Isoform Sigma In Complex With A 3e-60
4hqw_A236 Molecular Tweezers Modulate 14-3-3 Protein-protein 3e-60
3p1n_A235 Crystal Structure Of Human 14-3-3 Sigma In Complex 4e-60
3iqj_A236 Crystal Structure Of Human 14-3-3 Sigma In Complex 4e-60
3t0l_A235 Small-Molecule Inhibitors Of 14-3-3 Protein-Protein 4e-60
4dat_A234 Structure Of 14-3-3 Sigma In Complex With Padi6 14- 4e-60
3u9x_A235 Covalent Attachment Of Pyridoxal-Phosphate Derivati 2e-59
1ywt_A248 Crystal Structure Of The Human Sigma Isoform Of 14- 3e-59
4dnk_A247 Crystal Structure Of A Tyrosine 3-MonooxygenaseTRYP 1e-58
3uzd_A248 Crystal Structure Of 14-3-3 Gamma Length = 248 2e-57
2b05_A246 Crystal Structure Of 14-3-3 Gamma In Complex With A 2e-57
2c63_A247 14-3-3 Protein Eta (Human) Complexed To Peptide Len 1e-55
4e2e_A248 Crystal Structure Of A Tyrosine 3-MonooxygenaseTRYP 2e-54
3efz_A268 Crystal Structure Of A 14-3-3 Protein From Cryptosp 6e-11
>pdb|3AXY|C Chain C, Structure Of Florigen Activation Complex Consisting Of Rice Florigen Hd3a, 14-3-3 Protein Gf14 And Rice Fd Homolog Osfd1 Length = 240 Back     alignment and structure 
Iteration: 1

 Score =  323 bits (828), Expect = 4e-89,   Method: Compositional matrix adjust.
 Identities = 154/202 (76%), Positives = 179/202 (88%), Gaps = 1/202 (0%)
Query: 1   MGTPTREQYVYLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAYKNVIGS 60
           +G+ +RE+ VY+AKLAEQAERYEEMV++M+  V  +    ELTVEERNLLSVAYKNVIG+
Sbjct: 3   LGSMSREENVYMAKLAEQAERYEEMVEYMEK-VAKTVDVEELTVEERNLLSVAYKNVIGA 61
Query: 61  LRAAWRIISSIEQKEEGRKNEEHVSLVKDYRSKVESELSDVCGSILKLLDSHLVPSATAG 120
            RA+WRI+SSIEQKEEGR NEEHV+L+K+YR K+E+ELS +C  ILKLLDSHLVPS+TA 
Sbjct: 62  RRASWRIVSSIEQKEEGRGNEEHVTLIKEYRGKIEAELSKICDGILKLLDSHLVPSSTAA 121
Query: 121 ESKVFYLKMKGDYYRYLAEFKVGDERKAAAENTMLSYKAAQDIALTDLAPTHPIRLGLAL 180
           ESKVFYLKMKGDY+RYLAEFK G ERK AAE+TM++YKAAQDIAL DLAPTHPIRLGLAL
Sbjct: 122 ESKVFYLKMKGDYHRYLAEFKTGAERKEAAESTMVAYKAAQDIALADLAPTHPIRLGLAL 181
Query: 181 NFSVFYYEILNSSEKACTMAKQ 202
           NFSVFYYEILNS +KAC +AKQ
Sbjct: 182 NFSVFYYEILNSPDKACNLAKQ 203
>pdb|4DX0|A Chain A, Structure Of The 14-3-3PMA2 COMPLEX STABILIZED BY A PYRAZOLE Derivative Length = 243 Back     alignment and structure
>pdb|3M50|A Chain A, Structure Of The 14-3-3PMA2 COMPLEX STABILIZED BY EPIBESTAT Length = 240 Back     alignment and structure
>pdb|2O98|A Chain A, Structure Of The 14-3-3 H+-Atpase Plant Complex Length = 242 Back     alignment and structure
>pdb|1O9C|A Chain A, Structural View Of A Fungal Toxin Acting On A 14-3-3 Regulatory Complex Length = 260 Back     alignment and structure
>pdb|3UBW|A Chain A, Complex Of 14-3-3 Isoform Epsilon, A Mlf1 Phosphopeptide And A Small Fragment Hit From A Fbdd Screen Length = 261 Back     alignment and structure
>pdb|2BR9|A Chain A, 14-3-3 Protein Epsilon (Human) Complexed To Peptide Length = 234 Back     alignment and structure
>pdb|3UAL|A Chain A, Crystal Structure Of 14-3-3 Epsilon With Mlf1 Peptide Length = 232 Back     alignment and structure
>pdb|2NPM|A Chain A, Crystal Structure Of Cryptosporidium Parvum 14-3-3 Protein In Complex With Peptide Length = 260 Back     alignment and structure
>pdb|4FJ3|A Chain A, 14-3-3 Isoform Zeta In Complex With A Diphoyphorylated C-Raf Peptide Length = 235 Back     alignment and structure
>pdb|2V7D|A Chain A, 14-3-3 Protein Zeta In Complex With Thr758 Phosphorylated Integrin Beta2 Peptide Length = 247 Back     alignment and structure
>pdb|2BQ0|A Chain A, 14-3-3 Protein Beta (Human) Length = 245 Back     alignment and structure
>pdb|3SMO|A Chain A, Crystal Structure Of Human 14-3-3 Sigma C38vN166H IN COMPLEX WITH Task-3 Peptide And Stabilizer Fusicoccin J Aglycone Length = 235 Back     alignment and structure
>pdb|3P1R|A Chain A, Crystal Structure Of Human 14-3-3 Sigma C38vN166H IN COMPLEX WITH Task-3 Peptide Length = 236 Back     alignment and structure
>pdb|2BTP|A Chain A, 14-3-3 Protein Theta (Human) Complexed To Peptide Length = 256 Back     alignment and structure
>pdb|2C1J|A Chain A, Molecular Basis For The Recognition Of Phosphorylated And Phosphoacetylated Histone H3 By 14-3-3 Length = 258 Back     alignment and structure
>pdb|1A38|A Chain A, 14-3-3 Protein Zeta Bound To R18 Peptide Length = 245 Back     alignment and structure
>pdb|3RDH|A Chain A, X-Ray Induced Covalent Inhibition Of 14-3-3 Length = 248 Back     alignment and structure
>pdb|2O02|A Chain A, Phosphorylation Independent Interactions Between 14-3-3 And Exoenzyme S: From Structure To Pathogenesis Length = 230 Back     alignment and structure
>pdb|3P1P|A Chain A, Crystal Structure Of Human 14-3-3 Sigma C38nN166H IN COMPLEX WITH Task-3 Peptide Length = 236 Back     alignment and structure
>pdb|3LW1|A Chain A, Binary Complex Of 14-3-3 Sigma And P53 Pt387-Peptide Length = 253 Back     alignment and structure
>pdb|4GNT|A Chain A, Complex Of Chrebp And 14-3-3beta Length = 245 Back     alignment and structure
>pdb|3O8I|A Chain A, Structure Of 14-3-3 Isoform Sigma In Complex With A C-Raf1 Peptide And A Stabilizing Small Molecule Fragment Length = 239 Back     alignment and structure
>pdb|4HQW|A Chain A, Molecular Tweezers Modulate 14-3-3 Protein-protein Interactions Length = 236 Back     alignment and structure
>pdb|3P1N|A Chain A, Crystal Structure Of Human 14-3-3 Sigma In Complex With Task-3 Peptide Length = 235 Back     alignment and structure
>pdb|3IQJ|A Chain A, Crystal Structure Of Human 14-3-3 Sigma In Complex With Raf1 Peptide (10mer) Length = 236 Back     alignment and structure
>pdb|3T0L|A Chain A, Small-Molecule Inhibitors Of 14-3-3 Protein-Protein Interactions From Virtual Screening Length = 235 Back     alignment and structure
>pdb|4DAT|A Chain A, Structure Of 14-3-3 Sigma In Complex With Padi6 14-3-3 Binding Motif Ii Length = 234 Back     alignment and structure
>pdb|3U9X|A Chain A, Covalent Attachment Of Pyridoxal-Phosphate Derivatives To 14-3-3 Proteins Length = 235 Back     alignment and structure
>pdb|1YWT|A Chain A, Crystal Structure Of The Human Sigma Isoform Of 14-3-3 In Complex With A Mode-1 Phosphopeptide Length = 248 Back     alignment and structure
>pdb|4DNK|A Chain A, Crystal Structure Of A Tyrosine 3-MonooxygenaseTRYPTOPHAN 5- Monooxygenase Activation Protein, Beta Polypeptide (Ywhab) From Homo Sapiens At 2.20 A Resolution. Length = 247 Back     alignment and structure
>pdb|3UZD|A Chain A, Crystal Structure Of 14-3-3 Gamma Length = 248 Back     alignment and structure
>pdb|2B05|A Chain A, Crystal Structure Of 14-3-3 Gamma In Complex With A Phosphoserine Peptide Length = 246 Back     alignment and structure
>pdb|2C63|A Chain A, 14-3-3 Protein Eta (Human) Complexed To Peptide Length = 247 Back     alignment and structure
>pdb|4E2E|A Chain A, Crystal Structure Of A Tyrosine 3-MonooxygenaseTRYPTOPHAN 5- Monooxygenase Activation Protein, Gamma Polypeptide (Ywhag) From Homo Sapiens At 2.25 A Resolution Length = 248 Back     alignment and structure
>pdb|3EFZ|A Chain A, Crystal Structure Of A 14-3-3 Protein From Cryptosporidium Parvum (Cgd1_2980) Length = 268 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query216
2npm_A260 14-3-3 domain containing protein; cell regulator p 2e-81
2o8p_A227 14-3-3 domain containing protein; signaling protei 1e-79
3iqu_A236 14-3-3 protein sigma; signal transuction, nucleus, 1e-77
2br9_A234 14-3-3E, 14-3-3 protein epsilon; cell regulator pr 5e-77
3uzd_A248 14-3-3 protein gamma; structural genomics, SGC, st 7e-77
1o9d_A260 14-3-3-like protein C; protein-binding, fusicoccin 3e-76
3ubw_A261 14-3-3E, 14-3-3 protein epsilon; adapter protein, 1e-75
3efz_A268 14-3-3 protein; 14-3-3, cell regulation, structura 7e-73
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 1e-05
>2npm_A 14-3-3 domain containing protein; cell regulator protein 14-3-3, struc genomics, structural genomics consortium, SGC, protein BIND; HET: SEP; 2.52A {Cryptosporidium parvum} Length = 260 Back     alignment and structure
 Score =  242 bits (619), Expect = 2e-81
 Identities = 119/200 (59%), Positives = 152/200 (76%), Gaps = 1/200 (0%)

Query: 6   REQYVYLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAYKNVIGSLRAAW 65
           RE  VY+AKLAEQAERY+EM K+M  +V +   + ELTVEERNLLSVAYKN +GS R++W
Sbjct: 28  RESNVYMAKLAEQAERYDEMAKYMKDVVEARQESEELTVEERNLLSVAYKNAVGSRRSSW 87

Query: 66  RIISSIEQKEEGRKNEEHVSLVKDYRSKVESELSDVCGSILKLLDSHLVPSATAGESKVF 125
           RIISS+EQKE  R  E+   +   YRSKVE+EL+D+C  IL +LD HL+P+AT+ +SKVF
Sbjct: 88  RIISSVEQKEHSRNAEDASKMCGKYRSKVEAELTDICNDILTMLDKHLIPTATSPDSKVF 147

Query: 126 YLKMKGDYYRYLAEFKVGDERKAAAENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVF 185
           Y KMKGDY+RY++EF  GD ++++AE+ + +YK A  +A  DL PTHPIRLGLALNFSVF
Sbjct: 148 YFKMKGDYHRYISEFSTGDSKQSSAEDALKAYKDATVVA-KDLEPTHPIRLGLALNFSVF 206

Query: 186 YYEILNSSEKACTMAKQEKT 205
           +YEILN    A  MAK+   
Sbjct: 207 HYEILNEPRAAIDMAKEAFE 226
>2o8p_A 14-3-3 domain containing protein; signaling protein, 14-3-3, cell regulator protein, cryptospo parvum, structural genomics; HET: MSE; 1.82A {Cryptosporidium parvum} SCOP: a.118.7.1 Length = 227 Back     alignment and structure
>3iqu_A 14-3-3 protein sigma; signal transuction, nucleus, phosphoprotein, secreted, prote binding, signaling protein; HET: SEP; 1.05A {Homo sapiens} PDB: 3iqj_A* 3iqv_A* 3mhr_A* 3lw1_A* 3o8i_A* 3p1n_A* 3p1o_A* 3p1s_A* 3p1r_A* 3p1q_A* 3p1p_A* 1ywt_A* 1yz5_A 2v7d_A* 2o02_A 1qja_A* 1a37_A 1a38_A 1a4o_A* 1ib1_A* ... Length = 236 Back     alignment and structure
>2br9_A 14-3-3E, 14-3-3 protein epsilon; cell regulator protein, 14-3-3, phosphoserine, structural GE consortium, SGC, ywhae; HET: SEP; 1.75A {Homo sapiens} PDB: 3ual_A* 2o98_A* 3m50_A* 3m51_A* 3axy_C* Length = 234 Back     alignment and structure
>3uzd_A 14-3-3 protein gamma; structural genomics, SGC, structural genomics consortium, MA alpha, phosphoserine, phosphothreonine; HET: SEP; 1.86A {Homo sapiens} PDB: 4e2e_A 2b05_A* 2c63_A* 2c74_A* 4dnk_A 2bq0_A 2c23_A 2c1n_A* 2c1j_A* 2btp_A* Length = 248 Back     alignment and structure
>1o9d_A 14-3-3-like protein C; protein-binding, fusicoccin, 14-3-3 family, activating drug; HET: TPO; 2.3A {Nicotiana tabacum} SCOP: a.118.7.1 PDB: 1o9c_A* 1o9e_A* 1o9f_A* 3e6y_A* Length = 260 Back     alignment and structure
>3ubw_A 14-3-3E, 14-3-3 protein epsilon; adapter protein, signaling protein, signaling protein-protei complex; HET: SEP; 1.90A {Homo sapiens} Length = 261 Back     alignment and structure
>3efz_A 14-3-3 protein; 14-3-3, cell regulation, structural genom structural genomics consortium, SGC; HET: SEP; 2.08A {Cryptosporidium parvum} SCOP: a.118.7.1 PDB: 2ijp_A* Length = 268 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query216
3iqu_A236 14-3-3 protein sigma; signal transuction, nucleus, 100.0
3uzd_A248 14-3-3 protein gamma; structural genomics, SGC, st 100.0
3ubw_A261 14-3-3E, 14-3-3 protein epsilon; adapter protein, 100.0
2br9_A234 14-3-3E, 14-3-3 protein epsilon; cell regulator pr 100.0
1o9d_A260 14-3-3-like protein C; protein-binding, fusicoccin 100.0
2npm_A260 14-3-3 domain containing protein; cell regulator p 100.0
3efz_A268 14-3-3 protein; 14-3-3, cell regulation, structura 100.0
2o8p_A227 14-3-3 domain containing protein; signaling protei 100.0
3edt_B283 KLC 2, kinesin light chain 2; superhelical, struct 95.19
3u3w_A293 Transcriptional activator PLCR protein; ternary co 95.11
3n71_A490 Histone lysine methyltransferase SMYD1; heart deve 94.94
3qwp_A429 SET and MYND domain-containing protein 3; SMYD3,SE 94.44
3nf1_A311 KLC 1, kinesin light chain 1; TPR, structural geno 94.42
3vtx_A184 MAMA; tetratricopeptide repeats (TPR) containing p 94.42
3qww_A433 SET and MYND domain-containing protein 2; methyltr 94.39
3edt_B 283 KLC 2, kinesin light chain 2; superhelical, struct 93.77
4a1s_A 411 PINS, partner of inscuteable; cell cycle, LGN, mit 93.56
3ulq_A 383 Response regulator aspartate phosphatase F; tetrat 93.56
3qww_A433 SET and MYND domain-containing protein 2; methyltr 93.23
3sf4_A 406 G-protein-signaling modulator 2; tetratricopeptide 93.18
3n71_A490 Histone lysine methyltransferase SMYD1; heart deve 92.87
3q15_A 378 PSP28, response regulator aspartate phosphatase H; 92.79
2qfc_A293 PLCR protein; TPR, HTH, transcription regulation; 92.6
3ro2_A 338 PINS homolog, G-protein-signaling modulator 2; TPR 92.2
3qwp_A429 SET and MYND domain-containing protein 3; SMYD3,SE 91.07
3ulq_A 383 Response regulator aspartate phosphatase F; tetrat 90.72
4g1t_A472 Interferon-induced protein with tetratricopeptide 90.4
3hym_B330 Cell division cycle protein 16 homolog; APC, anaph 89.97
4gcn_A127 Protein STI-1; structural genomics, PSI-biology, m 89.79
3ro3_A164 PINS homolog, G-protein-signaling modulator 2; asy 89.6
3sf4_A 406 G-protein-signaling modulator 2; tetratricopeptide 89.24
3u4t_A272 TPR repeat-containing protein; structural genomics 89.21
2y4t_A450 DNAJ homolog subfamily C member 3; chaperone, endo 88.57
3ieg_A359 DNAJ homolog subfamily C member 3; TPR motif, chap 88.49
2xpi_A597 Anaphase-promoting complex subunit CUT9; cell cycl 86.69
3fp2_A537 TPR repeat-containing protein YHR117W; TOM71, mito 86.64
3rkv_A162 Putative peptidylprolyl isomerase; structural geno 86.34
4abn_A 474 Tetratricopeptide repeat protein 5; P53 cofactor, 86.2
4i17_A228 Hypothetical protein; TPR repeats protein, structu 86.14
3q15_A378 PSP28, response regulator aspartate phosphatase H; 85.98
3u4t_A272 TPR repeat-containing protein; structural genomics 85.94
1fch_A368 Peroxisomal targeting signal 1 receptor; protein-p 85.85
3fp2_A537 TPR repeat-containing protein YHR117W; TOM71, mito 85.84
2ho1_A252 Type 4 fimbrial biogenesis protein PILF; type IV p 85.04
4eqf_A365 PEX5-related protein; accessory protein, tetratric 84.98
4b4t_Q 434 26S proteasome regulatory subunit RPN6; hydrolase, 84.25
4gco_A126 Protein STI-1; structural genomics, PSI-biology, m 84.08
4gcn_A127 Protein STI-1; structural genomics, PSI-biology, m 83.89
1elr_A131 TPR2A-domain of HOP; HOP, TPR-domain, peptide-comp 83.77
2gw1_A 514 Mitochondrial precursor proteins import receptor; 83.59
4gyw_A 723 UDP-N-acetylglucosamine--peptide N- acetylglucosam 82.94
3ro2_A338 PINS homolog, G-protein-signaling modulator 2; TPR 82.63
3gw4_A203 Uncharacterized protein; structural genomics, PSI- 81.92
2q7f_A243 YRRB protein; TPR, protein binding; 2.49A {Bacillu 81.9
4g1t_A 472 Interferon-induced protein with tetratricopeptide 81.61
4a1s_A 411 PINS, partner of inscuteable; cell cycle, LGN, mit 81.25
2l6j_A111 TPR repeat-containing protein associated with HSP; 80.6
3sz7_A164 HSC70 cochaperone (SGT); TPR domain, GET4, GET5, G 80.24
3hym_B330 Cell division cycle protein 16 homolog; APC, anaph 80.11
3qky_A261 Outer membrane assembly lipoprotein YFIO; membrane 80.04
>3iqu_A 14-3-3 protein sigma; signal transuction, nucleus, phosphoprotein, secreted, prote binding, signaling protein; HET: SEP; 1.05A {Homo sapiens} SCOP: a.118.7.1 PDB: 3iqj_A* 3iqv_A* 3mhr_A* 3lw1_A* 3o8i_A* 3p1n_A* 3p1o_A* 3t0l_A* 3t0m_A* 3u9x_A* 3ux0_A* 4dat_A* 4dau_A* 3p1s_A* 3p1r_A* 3smk_A* 3spr_A* 3p1q_A* 3p1p_A* 3sml_A* ... Back     alignment and structure
Probab=100.00  E-value=3e-87  Score=572.21  Aligned_cols=209  Identities=54%  Similarity=0.808  Sum_probs=204.4

Q ss_pred             CcHHhHHHHHHHHHHhCCHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHHhhhhhhHHHHHHHhHhhhhhccCchhh
Q 027961            4 PTREQYVYLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAYKNVIGSLRAAWRIISSIEQKEEGRKNEEH   83 (216)
Q Consensus         4 ~~r~~li~~Aklaeq~ery~Dm~~~mk~~~~~~~~~~~Ls~eERnLlsvayKn~i~~~R~s~r~l~~~eqk~~~~~~~~~   83 (216)
                      .+|++++|+|||+|||||||||+++||++++  . +++||.||||||||||||+||++|+|||+|+++||+++.+|++.+
T Consensus         6 ~~re~~v~~AklaeqaeRyddM~~~mk~v~~--~-~~eLs~EERnLLSvaYKNvig~rR~swRiissieqke~~~~~~~~   82 (236)
T 3iqu_A            6 MERASLIQKAKLAEQAERYEDMAAFMKGAVE--K-GEELSCEERNLLSVAYKNVVGGQRAAWRVLSSIEQKSNEEGSEEK   82 (236)
T ss_dssp             SCHHHHHHHHHHHHHTTCHHHHHHHHHHHHH--T-CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTCCCC
T ss_pred             ccHHHHHHHHHHHHHhccHHHHHHHHHHHHh--c-CCcCCHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHhhcCCHHH
Confidence            4799999999999999999999999999998  4 599999999999999999999999999999999999988888889


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCchHhHHhhhhcccchhhhhcccchhHHHHHHHHHHHHHHHHHH
Q 027961           84 VSLVKDYRSKVESELSDVCGSILKLLDSHLVPSATAGESKVFYLKMKGDYYRYLAEFKVGDERKAAAENTMLSYKAAQDI  163 (216)
Q Consensus        84 ~~~i~~yr~ki~~EL~~~c~eil~lid~~Lip~~~~~eskvfy~KmkgDyyRYlaE~~~~~~~~~~~~~a~~aY~~A~~~  163 (216)
                      ++.+++||++|++||..+|++|+++||++|||.++++|++|||+|||||||||+|||.+|++|++++++|+++|++|+++
T Consensus        83 ~~~i~~yr~kie~EL~~iC~dil~lld~~Lip~a~~~eskVFY~KmKGDyyRYlAE~~~g~~r~~~~e~a~~aY~~A~~i  162 (236)
T 3iqu_A           83 GPEVREYREKVETELQGVCDTVLGLLDSHLIKEAGDAESRVFYLKMKGDYYRYLAEVATGDDKKRIIDSARSAYQEAMDI  162 (236)
T ss_dssp             CSHHHHHHHHHHHHHHHHHHHHHHHHHTTHHHHCCSHHHHHHHHHHHHHHHHHHHHHCCSTTHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccCCchHHHHHHHHhhhhHHHHHHHhcCchHHHHHHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HhhcCCCCCchhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhhcCCCC
Q 027961          164 ALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQEKTLTRLVSPFLG  215 (216)
Q Consensus       164 a~~~L~pt~pirLgL~LN~SVF~yEi~~~~~~A~~iAk~Afd~ai~~~~~l~  215 (216)
                      |+++|||||||||||+||||||||||+|+|++||++||+|||+||+++|+|+
T Consensus       163 A~~~L~pthPirLGLaLNfSVFyyEiln~~~~Ac~lAk~Afd~Ai~eld~l~  214 (236)
T 3iqu_A          163 SKKEMPPTNPIRLGLALNFSVFHYEIANSPEEAISLAKTTFDEAMADLHTLS  214 (236)
T ss_dssp             HHHHSCTTCHHHHHHHHHHHHHHHHTSSCHHHHHHHHHHHHHHHHHHGGGSC
T ss_pred             HHhhCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHhhccC
Confidence            9999999999999999999999999999999999999999999999999986
>3uzd_A 14-3-3 protein gamma; structural genomics, SGC, structural genomics consortium, MA alpha, phosphoserine, phosphothreonine; HET: SEP; 1.86A {Homo sapiens} PDB: 4e2e_A 2b05_A* 2c63_A* 2c74_A* 4dnk_A 4gnt_A 2bq0_A 2c23_A 2c1n_A* 2c1j_A* 2btp_A* Back     alignment and structure
>3ubw_A 14-3-3E, 14-3-3 protein epsilon; adapter protein, signaling protein, signaling protein-protei complex; HET: SEP; 1.90A {Homo sapiens} Back     alignment and structure
>2br9_A 14-3-3E, 14-3-3 protein epsilon; cell regulator protein, 14-3-3, phosphoserine, structural GE consortium, SGC, ywhae; HET: SEP; 1.75A {Homo sapiens} PDB: 3ual_A* 2o98_A* 3m50_A* 3m51_A* 3axy_C* Back     alignment and structure
>1o9d_A 14-3-3-like protein C; protein-binding, fusicoccin, 14-3-3 family, activating drug; HET: TPO; 2.3A {Nicotiana tabacum} SCOP: a.118.7.1 PDB: 1o9c_A* 1o9e_A* 1o9f_A* 3e6y_A* Back     alignment and structure
>2npm_A 14-3-3 domain containing protein; cell regulator protein 14-3-3, struc genomics, structural genomics consortium, SGC, protein BIND; HET: SEP; 2.52A {Cryptosporidium parvum} Back     alignment and structure
>3efz_A 14-3-3 protein; 14-3-3, cell regulation, structural genom structural genomics consortium, SGC; HET: SEP; 2.08A {Cryptosporidium parvum} SCOP: a.118.7.1 PDB: 2ijp_A* Back     alignment and structure
>2o8p_A 14-3-3 domain containing protein; signaling protein, 14-3-3, cell regulator protein, cryptospo parvum, structural genomics; HET: MSE; 1.82A {Cryptosporidium parvum} SCOP: a.118.7.1 Back     alignment and structure
>3edt_B KLC 2, kinesin light chain 2; superhelical, structural genomics, structural genomics conso SGC, microtubule, motor protein, phosphoprotein; 2.70A {Homo sapiens} PDB: 3ceq_A Back     alignment and structure
>3u3w_A Transcriptional activator PLCR protein; ternary complex, PLCR-PAPR7-DNA, HTH DNA-binding domain, QUO sensing; 2.40A {Bacillus thuringiensis} PDB: 2qfc_A Back     alignment and structure
>3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus} Back     alignment and structure
>3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A* Back     alignment and structure
>3nf1_A KLC 1, kinesin light chain 1; TPR, structural genomics consortium (SGC), motor PR transport protein; 2.80A {Homo sapiens} Back     alignment and structure
>3vtx_A MAMA; tetratricopeptide repeats (TPR) containing protein, peptide protein, protein binding; 1.75A {Candidatus magnetobacterium bavaricum} PDB: 3vty_A Back     alignment and structure
>3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A* Back     alignment and structure
>3edt_B KLC 2, kinesin light chain 2; superhelical, structural genomics, structural genomics conso SGC, microtubule, motor protein, phosphoprotein; 2.70A {Homo sapiens} PDB: 3ceq_A Back     alignment and structure
>4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster} Back     alignment and structure
>3ulq_A Response regulator aspartate phosphatase F; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis} Back     alignment and structure
>3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A* Back     alignment and structure
>3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens} Back     alignment and structure
>3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus} Back     alignment and structure
>3q15_A PSP28, response regulator aspartate phosphatase H; tetratricopeptide repeat, 3-helix bundle, phosphorelay signa transduction, phosphatase; 2.19A {Bacillus subtilis} Back     alignment and structure
>2qfc_A PLCR protein; TPR, HTH, transcription regulation; 2.60A {Bacillus thuringiensis serovar ISRAELE35646} Back     alignment and structure
>3ro2_A PINS homolog, G-protein-signaling modulator 2; TPR repeat, protein-protein interaction, protein-binding, PR binding; 2.30A {Mus musculus} Back     alignment and structure
>3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A* Back     alignment and structure
>3ulq_A Response regulator aspartate phosphatase F; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis} Back     alignment and structure
>4g1t_A Interferon-induced protein with tetratricopeptide 2; ISG, all alpha helix, antivirus, antiviral protein; 2.80A {Homo sapiens} Back     alignment and structure
>3hym_B Cell division cycle protein 16 homolog; APC, anaphase promoting complex, cell cycle, mitosis, cyclosome, TPR, ubiquitin, ubiquitin ligase, twinning; 2.80A {Homo sapiens} Back     alignment and structure
>4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans} Back     alignment and structure
>3ro3_A PINS homolog, G-protein-signaling modulator 2; asymmetric cell division, protein binding; 1.10A {Mus musculus} Back     alignment and structure
>3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens} Back     alignment and structure
>3u4t_A TPR repeat-containing protein; structural genomics, PSI- protein structure initiative, northeast structural genomics consortium, NESG; 2.28A {Cytophaga hutchinsonii} Back     alignment and structure
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A Back     alignment and structure
>3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus} Back     alignment and structure
>2xpi_A Anaphase-promoting complex subunit CUT9; cell cycle, TPR, ubiquitin ligase; 2.60A {Schizosaccharomyces pombe} Back     alignment and structure
>3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A Back     alignment and structure
>3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans} Back     alignment and structure
>4abn_A Tetratricopeptide repeat protein 5; P53 cofactor, stress-response, DNA repair, gene regulation; 2.05A {Mus musculus} Back     alignment and structure
>4i17_A Hypothetical protein; TPR repeats protein, structural genomics, joint center for S genomics, JCSG, protein structure initiative; HET: MSE; 1.83A {Bacteroides fragilis} Back     alignment and structure
>3q15_A PSP28, response regulator aspartate phosphatase H; tetratricopeptide repeat, 3-helix bundle, phosphorelay signa transduction, phosphatase; 2.19A {Bacillus subtilis} Back     alignment and structure
>3u4t_A TPR repeat-containing protein; structural genomics, PSI- protein structure initiative, northeast structural genomics consortium, NESG; 2.28A {Cytophaga hutchinsonii} Back     alignment and structure
>1fch_A Peroxisomal targeting signal 1 receptor; protein-peptide complex, tetratricopeptide repeat, TPR, helical repeat, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.8.1 PDB: 2j9q_A 3imz_B* 3r9a_B* 2c0m_A 2c0l_A Back     alignment and structure
>3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A Back     alignment and structure
>2ho1_A Type 4 fimbrial biogenesis protein PILF; type IV pilus biogenesis, TPR, superhelix, protein binding; HET: MSE; 2.00A {Pseudomonas aeruginosa} PDB: 2fi7_A Back     alignment and structure
>4eqf_A PEX5-related protein; accessory protein, tetratricopeptide repeat, TPR; 3.00A {Mus musculus} Back     alignment and structure
>4b4t_Q 26S proteasome regulatory subunit RPN6; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae} Back     alignment and structure
>4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans} Back     alignment and structure
>4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans} Back     alignment and structure
>1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A Back     alignment and structure
>2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae} Back     alignment and structure
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A* Back     alignment and structure
>3ro2_A PINS homolog, G-protein-signaling modulator 2; TPR repeat, protein-protein interaction, protein-binding, PR binding; 2.30A {Mus musculus} Back     alignment and structure
>3gw4_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, DRR162B; 2.49A {Deinococcus radiodurans R1} Back     alignment and structure
>2q7f_A YRRB protein; TPR, protein binding; 2.49A {Bacillus subtilis} SCOP: k.38.1.1 Back     alignment and structure
>4g1t_A Interferon-induced protein with tetratricopeptide 2; ISG, all alpha helix, antivirus, antiviral protein; 2.80A {Homo sapiens} Back     alignment and structure
>4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster} Back     alignment and structure
>2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae} Back     alignment and structure
>3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus} Back     alignment and structure
>3hym_B Cell division cycle protein 16 homolog; APC, anaphase promoting complex, cell cycle, mitosis, cyclosome, TPR, ubiquitin, ubiquitin ligase, twinning; 2.80A {Homo sapiens} Back     alignment and structure
>3qky_A Outer membrane assembly lipoprotein YFIO; membrane protein; 2.15A {Rhodothermus marinus} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 216
d1o9da_236 a.118.7.1 (A:) 14-3-3-like protein C {Common tobac 2e-96
d2o02a1230 a.118.7.1 (A:1-230) zeta isoform {Cow (Bos taurus) 2e-91
d2o8pa1220 a.118.7.1 (A:8-227) 14-3-3 domain containing prote 8e-84
d3efza1223 a.118.7.1 (A:46-268) 14-3-3 protein cgd1_2980 {Cry 8e-76
>d1o9da_ a.118.7.1 (A:) 14-3-3-like protein C {Common tobacco (Nicotiana tabacum) [TaxId: 4097]} Length = 236 Back     information, alignment and structure

class: All alpha proteins
fold: alpha-alpha superhelix
superfamily: 14-3-3 protein
family: 14-3-3 protein
domain: 14-3-3-like protein C
species: Common tobacco (Nicotiana tabacum) [TaxId: 4097]

 Score =  278 bits (713), Expect = 2e-96
 Identities = 147/197 (74%), Positives = 175/197 (88%), Gaps = 1/197 (0%)

Query: 6   REQYVYLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAYKNVIGSLRAAW 65
           RE+ VY+AKLAEQAERYEEMV+FM+  V++S  + ELTVEERNLLSVAYKNVIG+ RA+W
Sbjct: 4   REENVYMAKLAEQAERYEEMVEFMEK-VSNSLGSEELTVEERNLLSVAYKNVIGARRASW 62

Query: 66  RIISSIEQKEEGRKNEEHVSLVKDYRSKVESELSDVCGSILKLLDSHLVPSATAGESKVF 125
           RIISSIEQKEE R NEEHV+ +++YRSK+E+ELS +C  ILKLLD+ L+PSA +G+SKVF
Sbjct: 63  RIISSIEQKEESRGNEEHVNSIREYRSKIENELSKICDGILKLLDAKLIPSAASGDSKVF 122

Query: 126 YLKMKGDYYRYLAEFKVGDERKAAAENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVF 185
           YLKMKGDY+RYLAEFK G ERK AAE+T+ +YKAAQDIA T+LAPTHPIRLGLALNFSVF
Sbjct: 123 YLKMKGDYHRYLAEFKTGAERKEAAESTLTAYKAAQDIATTELAPTHPIRLGLALNFSVF 182

Query: 186 YYEILNSSEKACTMAKQ 202
           YYEILNS ++AC +AKQ
Sbjct: 183 YYEILNSPDRACNLAKQ 199
>d2o02a1 a.118.7.1 (A:1-230) zeta isoform {Cow (Bos taurus) [TaxId: 9913]} Length = 230 Back     information, alignment and structure
>d2o8pa1 a.118.7.1 (A:8-227) 14-3-3 domain containing protein cgd7_2470 {Cryptosporidium parvum [TaxId: 5807]} Length = 220 Back     information, alignment and structure
>d3efza1 a.118.7.1 (A:46-268) 14-3-3 protein cgd1_2980 {Cryptosporidium parvum [TaxId: 5807]} Length = 223 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query216
d1o9da_236 14-3-3-like protein C {Common tobacco (Nicotiana t 100.0
d2o02a1230 zeta isoform {Cow (Bos taurus) [TaxId: 9913]} 100.0
d2o8pa1220 14-3-3 domain containing protein cgd7_2470 {Crypto 100.0
d3efza1223 14-3-3 protein cgd1_2980 {Cryptosporidium parvum [ 100.0
d1tjca_95 Prolyl 4-hydroxylase alpha-1 subunit, P4HA1 {Human 89.53
d1kt1a1168 FKBP51, C-terminal domain {Monkey (Saimiri bolivie 89.04
d1fcha_323 Peroxin pex5 (peroxisomal targeting signal 1 (PTS1 87.21
d1elra_128 Hop {Human (Homo sapiens) [TaxId: 9606]} 86.53
d2fbna1153 Putative 70 kda peptidylprolyl isomerase PFL2275c 86.31
d1p5qa1170 FKBP52 (FKBP4), C-terminal domain {Human (Homo sap 86.1
d1a17a_159 Protein phosphatase 5 {Human (Homo sapiens) [TaxId 83.05
>d1o9da_ a.118.7.1 (A:) 14-3-3-like protein C {Common tobacco (Nicotiana tabacum) [TaxId: 4097]} Back     information, alignment and structure
class: All alpha proteins
fold: alpha-alpha superhelix
superfamily: 14-3-3 protein
family: 14-3-3 protein
domain: 14-3-3-like protein C
species: Common tobacco (Nicotiana tabacum) [TaxId: 4097]

Probab=100.00  E-value=3.6e-80  Score=528.57  Aligned_cols=211  Identities=70%  Similarity=1.041  Sum_probs=204.2

Q ss_pred             CcHHhHHHHHHHHHHhCCHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHHhhhhhhHHHHHHHhHhhhhhccCchhh
Q 027961            4 PTREQYVYLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAYKNVIGSLRAAWRIISSIEQKEEGRKNEEH   83 (216)
Q Consensus         4 ~~r~~li~~Aklaeq~ery~Dm~~~mk~~~~~~~~~~~Ls~eERnLlsvayKn~i~~~R~s~r~l~~~eqk~~~~~~~~~   83 (216)
                      ++|+++||+|||++|||||+||+.+||++++. .++++||.|||||||+||||+||++|+|||+|++++++++..|++.+
T Consensus         2 ~~Re~lv~~AklaeqaeRy~dm~~~mk~v~~~-~~~~~Ls~eERnLlsvayKn~i~~~R~s~r~l~~~e~k~~~~~~~~~   80 (236)
T d1o9da_           2 TAREENVYMAKLAEQAERYEEMVEFMEKVSNS-LGSEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNEEH   80 (236)
T ss_dssp             CHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHT-CSSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCHHH
T ss_pred             CcHHHHHHHHHHHHHhcCHHHHHHHHHHHHHh-cCCCCCCHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHccCChHH
Confidence            68999999999999999999999999999972 23489999999999999999999999999999999999988888889


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCchHhHHhhhhcccchhhhhcccchhHHHHHHHHHHHHHHHHHH
Q 027961           84 VSLVKDYRSKVESELSDVCGSILKLLDSHLVPSATAGESKVFYLKMKGDYYRYLAEFKVGDERKAAAENTMLSYKAAQDI  163 (216)
Q Consensus        84 ~~~i~~yr~ki~~EL~~~c~eil~lid~~Lip~~~~~eskvfy~KmkgDyyRYlaE~~~~~~~~~~~~~a~~aY~~A~~~  163 (216)
                      ++.+++||++|++||..+|++|+++||++|||.+++++++|||+|||||||||+|||.+|+++++++++|.++|++|+++
T Consensus        81 ~~~i~~yk~kie~EL~~~C~~ii~lid~~Lip~~~~~eskvFy~KmkgDyyRYlaE~~~~~e~~~~~~~a~~aY~~A~~~  160 (236)
T d1o9da_          81 VNSIREYRSKIENELSKICDGILKLLDAKLIPSAASGDSKVFYLKMKGDYHRYLAEFKTGAERKEAAESTLTAYKAAQDI  160 (236)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHCCSHHHHHHHHHHHHHHHHHHHHHCCSHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCCCchhHHHHHHhhchHHHHHHHhcCchhHHHHHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HhhcCCCCCchhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhhcCCCC
Q 027961          164 ALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQEKTLTRLVSPFLG  215 (216)
Q Consensus       164 a~~~L~pt~pirLgL~LN~SVF~yEi~~~~~~A~~iAk~Afd~ai~~~~~l~  215 (216)
                      |+++||||||+||||+||||||||||+|++++||++|++|||+||..++.|+
T Consensus       161 a~~~l~pt~PirLgLaLN~SVF~yEi~~~~~~A~~lak~afd~ai~~~d~l~  212 (236)
T d1o9da_         161 ATTELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAIAELDTLG  212 (236)
T ss_dssp             HHHHSCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred             HHhcCCCCcHHHHHHHHhHHHHHHHHcCCHHHHHHHHHHHHHHHHHHhhcCC
Confidence            9989999999999999999999999999999999999999999999998875
>d2o02a1 a.118.7.1 (A:1-230) zeta isoform {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure
>d2o8pa1 a.118.7.1 (A:8-227) 14-3-3 domain containing protein cgd7_2470 {Cryptosporidium parvum [TaxId: 5807]} Back     information, alignment and structure
>d3efza1 a.118.7.1 (A:46-268) 14-3-3 protein cgd1_2980 {Cryptosporidium parvum [TaxId: 5807]} Back     information, alignment and structure
>d1tjca_ a.118.8.1 (A:) Prolyl 4-hydroxylase alpha-1 subunit, P4HA1 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1kt1a1 a.118.8.1 (A:254-421) FKBP51, C-terminal domain {Monkey (Saimiri boliviensis) [TaxId: 27679]} Back     information, alignment and structure
>d1fcha_ a.118.8.1 (A:) Peroxin pex5 (peroxisomal targeting signal 1 (PTS1) receptor) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1elra_ a.118.8.1 (A:) Hop {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2fbna1 a.118.8.1 (A:22-174) Putative 70 kda peptidylprolyl isomerase PFL2275c {Plasmodium falciparum [TaxId: 5833]} Back     information, alignment and structure
>d1p5qa1 a.118.8.1 (A:258-427) FKBP52 (FKBP4), C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1a17a_ a.118.8.1 (A:) Protein phosphatase 5 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure