Citrus Sinensis ID: 028071

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210----
Protein Sequence
MDPEEAPIAPSAAAGQADKPKPPKSGRSHRKRNICIGILVSIVAIVLLIVILALTVFKAKDPKTTINSITVQDVSIALDSARMRVNLNITLDVNVGIKNPNKVSMKLKKGNADIMYRGDTVGVVPIPVAKISADKTTALNMTVTILANRFLSNPQLFSDATAGSMPMSTMAKVSGKVNIVGIKISVSATSTCHFTVFLGNRTVSDQDCKTKAKI
Secondary Structure (PSIPRED)
ccccccccccccccccccccccccccccccccEEEHHHHHHHHHHHHHHHHEEEEEEEEcccEEEEEEEEEEEEEEEcccccccEEEEEEEEEEEEEEcccEEEEEEEcEEEEEEEccEEEEccccccEEEEcccEEEEEEEEEEEEEEEcccccHHHHccccEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEccccEEEccccEEEEEc
Secondary Structure Prediction (SSPRO)
cccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccEEEEEEEEEEcEEccccccccccEEEEEEEEEEEEEccccEEEEEcccEEEEEEcccEEEEEEcccccEcccccEEEEEEEEEEccHHcccccHHHHHHcccEEEEEEEEEcEEEEEEEEEEEEEEEEEEEEEEEccccEEEEccccccEcc
Coil and Loop (DISEMBL)
mdpeeapiapsaaagqadkpkppksgrshrkrniCIGILVSIVAIVLLIVILALTVfkakdpkttinsitvQDVSIALDSARMRVNLNITLDvnvgiknpnkVSMKLkkgnadimyrgdtvgvvpipvakisadktTALNMTVTILANRflsnpqlfsdatagsmpmstmaKVSGKVNIVGIKISVSATSTCHFTVFlgnrtvsdqdcktkaki
Flexible Loop (DISEMBL)
mdpeeapiapsaaagqadkpkppksgrshrkrNICIGILVSIVAIVLLIVILALTVfkakdpkttinsitvqdvsialDSARMRVNLNitldvnvgiknpnkvSMKLKKGNADIMYRGDTVGVVPIPVAKISADKTTALNMTVTILANRFLSNPQLFSDATAGSMPMSTMAKVSGKVNIVGIKISVSATSTCHFtvflgnrtvsdqdcktkaki
Low Complexity Region (SEG)
MDpeeapiapsaaagqaDKPKPPKSGRSHRKRNICIGilvsivaivllivilaltvFKAKDPKTTINSITVQDVSIALDSARMRVNLNITLDVNVGIKNPNKVSMKLKKGNADIMYRGDTVGVVPIPVAKISADKTTALNMTVTILANRFLSNPQLFSDATAGSMPMSTMAKVSGKVNIVGIKISVSATSTCHFTVFLGNRTVSDQDCKTKAKI
Disordered region (IsUnstruct)
********************************NICIGILVSIVAIVLLIVILALTVFKAKDPKTTINSITVQDVSIALDSARMRVNLNITLDVNVGIKNPNKVSMKLKKGNADIMYRGDTVGVVPIPVAKISADKTTALNMTVTILANRFLSNPQLFSD**********MAKVSGKVNIVGIKISVSATSTCHFTVFLGNRT************
Disordered Region (DISOPRED)
****EAP*************************NICIGILVSIVAIVLLIVILALTVFKAKDPKTTINSITVQDVSIALDSARMRVNLNITLDVNVGIKNPNKVSMKLKKGNADIMYRGDTVGVVPIPVAKISADKTTALNMTVTILANRFLSNPQLFSDATAGSMPMSTMAKVSGKVNIVGIKISVSATSTCHFTVFLGNRTVSDQDCKT*AKI
Disordered Region (DISEMBL)
*****************************RKRNICIGILVSIVAIVLLIVILALTVFKAKDPKTTINSITVQDVSIALDSARMRVNLNITLDVNVGIKNPNKVSMKLKKGNADIMYRGDTVGVVPIPVAKISADKTTALNMTVTILANRFLSNPQLFSDATAGSMPMSTMAKVSGKVNIVGIKISVSATSTCHFTVFLGNRTVS**********
Disordered Region (DISPRO)
***************************SHRKRNICIGILVSIVAIVLLIVILALTVFKAKDPKTTINSITVQDVSIALDSARMRVNLNITLDVNVGIKNPNKVSMKLKKGNADIMYRGDTVGVVPIPVAKISADKTTALNMTVTILANRFLSNPQLFSDATAGSMPMSTMAKVSGKVNIVGIKISVSATSTCHFTVFLGNRTVSDQDCKTKA**
Transmembrane Helix (TMHMM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MDPEEAPIAPSAAAGQADKPKPPKSGRSHRKRNICIGILVSIVAIVLLIVILALTVFKAKDPKTTINSITVQDVSIALDSARMRVNLNITLDVNVGIKNPNKVSMKLKKGNADIMYRGDTVGVVPIPVAKISADKTTALNMTVTILANRFLSNPQLFSDATAGSMPMSTMAKVSGKVNIVGIKISVSATSTCHFTVFLGNRTVSDQDCKTKAKI
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	214
255582050	217	conserved hypothetical protein [Ricinus	0.897	0.884	0.515	1e-48
92896037	192	Harpin-induced 1 [Medicago truncatula] g	0.864	0.963	0.478	2e-44
224069062	206	predicted protein [Populus trichocarpa]	0.897	0.932	0.479	2e-44
357512679	201	hypothetical protein MTR_8g005060 [Medic	0.864	0.920	0.478	2e-44
356560109	192	PREDICTED: uncharacterized protein LOC10	0.873	0.973	0.468	3e-44
356505663	192	PREDICTED: uncharacterized protein LOC10	0.873	0.973	0.462	7e-44
224140649	196	predicted protein [Populus trichocarpa]	0.892	0.974	0.445	1e-43
356551245	376	PREDICTED: uncharacterized protein LOC10	0.873	0.497	0.462	4e-43
356566824	196	PREDICTED: uncharacterized protein LOC10	0.892	0.974	0.393	3e-35
239056186	162	unknown [Vitis vinifera]	0.757	1.0	0.445	1e-34

>gi|255582050|ref|XP_002531822.1| conserved hypothetical protein [Ricinus communis] gi|223528556|gb|EEF30579.1| conserved hypothetical protein [Ricinus communis]

 Score =  198 bits (503), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 100/194 (51%), Positives = 147/194 (75%), Gaps = 2/194 (1%)

Query: 23  PKSGRSHRKRNICIGILVSIVAIVLLIVILA-LTVFKAKDPKTTINSITVQDVSIALDSA 81
           PK+   HR+RNIC+ I  S++ ++++I ++   TVFKAK+P TTI+SI+++++ + LD+A
Sbjct: 24  PKTKSKHRRRNICLAITASVIVLIVVIAVILAFTVFKAKEPTTTIDSISLENLKVDLDAA 83

Query: 82  RMRVNLNITLDVNVGIKNPNKVSMKLKKGNADIMYRGDTVGVVPIPVAKISADKTTALNM 141
           RM V+LN+T+DV++ + NPNKV +K K G+A + YRG+ VG VPIP  K+ AD+T  +N+
Sbjct: 84  RMGVDLNMTMDVDLTVTNPNKVGLKYKNGSALLNYRGELVGEVPIPAGKMGADETRPMNV 143

Query: 142 TVTILANRFLSNPQLFSDATAGSMPMSTMAKVSGKVNIVGI-KISVSATSTCHFTVFLGN 200
           TVT++A+R LSNPQLFSD  +G + +ST+ K+SGKV I  I KISV  T+TC  +VF+ N
Sbjct: 144 TVTVMADRLLSNPQLFSDVMSGLLNVSTLIKLSGKVAIFNIFKISVDTTTTCDVSVFIAN 203

Query: 201 RTVSDQDCKTKAKI 214
            T++DQ CK KAKI
Sbjct: 204 ATIADQKCKYKAKI 217

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|92896037|gb|ABE93043.1| Harpin-induced 1 [Medicago truncatula] gi|388498244|gb|AFK37188.1| unknown [Medicago truncatula]

 Score =  184 bits (468), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 89/186 (47%), Positives = 130/186 (69%), Gaps = 1/186 (0%)

Query: 30  RKRNICIGILVSIVAIVLLIVILALTVFKAKDPKTTINSITVQDVSIALDSARMRVNLNI 89
           + R  C+ +    +AIVLLIVILA TVFK+K P TT+NS+ ++D  + LD A++RV+LN+
Sbjct: 7   KGRKACLIVTTVFIAIVLLIVILAFTVFKSKHPVTTVNSLKLRDFDVNLDIAKLRVDLNV 66

Query: 90  TLDVNVGIKNPNKVSMKLKKGNADIMYRGDTVGVVPIPVAKISADKTTALNMTVTILANR 149
           TLDV+V +KNPNKV  K     A + YRG  +G VPI    IS+ +T   N+T+T +A+R
Sbjct: 67  TLDVDVSVKNPNKVGFKYSNTTAHLNYRGQLIGEVPISAGDISSGETKGFNLTLTFMADR 126

Query: 150 FLSNPQLFSDATAGSMPMSTMAKVSGKVNIVG-IKISVSATSTCHFTVFLGNRTVSDQDC 208
            LSN QLFSD T+G++P++T   + GKVNI+G IK+ V ++++C F V   N+TV +Q+C
Sbjct: 127 LLSNSQLFSDITSGTLPLNTFLTIFGKVNILGFIKVHVISSASCDFAVNTSNKTVGNQEC 186

Query: 209 KTKAKI 214
           + K K+
Sbjct: 187 QYKTKL 192

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224069062|ref|XP_002326265.1| predicted protein [Populus trichocarpa] gi|222833458|gb|EEE71935.1| predicted protein [Populus trichocarpa]

 Score =  184 bits (467), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 93/194 (47%), Positives = 141/194 (72%), Gaps = 2/194 (1%)

Query: 23  PKSGRSHRKRNICIGILVSI-VAIVLLIVILALTVFKAKDPKTTINSITVQDVSIALDSA 81
           P+S + HR+RN+C+G+ V++ + I L+++IL LTVFK K   TT++S ++ D+ ++LD+A
Sbjct: 13  PESPKKHRRRNVCLGVTVAVNLVISLVLLILGLTVFKPKQLTTTVDSTSISDLKVSLDTA 72

Query: 82  RMRVNLNITLDVNVGIKNPNKVSMKLKKGNADIMYRGDTVGVVPIPVAKISADKTTALNM 141
           R+RV +N++LD+++ IKNPNKVS K K  +A + YRG  VG VPIP  KISAD T  +N+
Sbjct: 73  RLRVRVNVSLDMDLSIKNPNKVSAKYKDSSAFLNYRGQVVGEVPIPAGKISADSTKPMNV 132

Query: 142 TVTILANRFLSNPQLFSDATAGSMPMSTMAKVSGKVNIVGI-KISVSATSTCHFTVFLGN 200
           T+T++A+R LS+ QLFSDA AG++P + + K+SGKV+I  + K+  + T  C   VF+ N
Sbjct: 133 TLTLVADRLLSDSQLFSDAMAGAIPFNILTKISGKVSIFNLFKVKFTCTVRCDLVVFVSN 192

Query: 201 RTVSDQDCKTKAKI 214
            T+ DQ CK K K+
Sbjct: 193 STIGDQKCKYKTKL 206

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357512679|ref|XP_003626628.1| hypothetical protein MTR_8g005060 [Medicago truncatula] gi|355520650|gb|AET01104.1| hypothetical protein MTR_8g005060 [Medicago truncatula]

 Score =  184 bits (467), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 89/186 (47%), Positives = 130/186 (69%), Gaps = 1/186 (0%)

Query: 30  RKRNICIGILVSIVAIVLLIVILALTVFKAKDPKTTINSITVQDVSIALDSARMRVNLNI 89
           + R  C+ +    +AIVLLIVILA TVFK+K P TT+NS+ ++D  + LD A++RV+LN+
Sbjct: 16  KGRKACLIVTTVFIAIVLLIVILAFTVFKSKHPVTTVNSLKLRDFDVNLDIAKLRVDLNV 75

Query: 90  TLDVNVGIKNPNKVSMKLKKGNADIMYRGDTVGVVPIPVAKISADKTTALNMTVTILANR 149
           TLDV+V +KNPNKV  K     A + YRG  +G VPI    IS+ +T   N+T+T +A+R
Sbjct: 76  TLDVDVSVKNPNKVGFKYSNTTAHLNYRGQLIGEVPISAGDISSGETKGFNLTLTFMADR 135

Query: 150 FLSNPQLFSDATAGSMPMSTMAKVSGKVNIVG-IKISVSATSTCHFTVFLGNRTVSDQDC 208
            LSN QLFSD T+G++P++T   + GKVNI+G IK+ V ++++C F V   N+TV +Q+C
Sbjct: 136 LLSNSQLFSDITSGTLPLNTFLTIFGKVNILGFIKVHVISSASCDFAVNTSNKTVGNQEC 195

Query: 209 KTKAKI 214
           + K K+
Sbjct: 196 QYKTKL 201

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356560109|ref|XP_003548338.1| PREDICTED: uncharacterized protein LOC100793994 [Glycine max]

 Score =  184 bits (466), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 88/188 (46%), Positives = 134/188 (71%), Gaps = 1/188 (0%)

Query: 28  SHRKRNICIGILVSIVAIVLLIVILALTVFKAKDPKTTINSITVQDVSIALDSARMRVNL 87
           S + R +C+ +   ++AIVLLIVILALTVFKAK P TT++S  ++D  + LD+ ++RV+L
Sbjct: 5   SGKGRKVCLSLTGVVIAIVLLIVILALTVFKAKHPVTTVDSTKLEDFHMGLDTPKLRVDL 64

Query: 88  NITLDVNVGIKNPNKVSMKLKKGNADIMYRGDTVGVVPIPVAKISADKTTALNMTVTILA 147
           N+TL V+V +KNPNKV  K     A + YRG  +G VPIP  +IS+ +T   N+T+TI+A
Sbjct: 65  NVTLHVDVSVKNPNKVGFKYSDSTAHLNYRGQLIGEVPIPAGEISSGETKGFNLTLTIMA 124

Query: 148 NRFLSNPQLFSDATAGSMPMSTMAKVSGKVNIVG-IKISVSATSTCHFTVFLGNRTVSDQ 206
           +R LSN QL SD  +G++P++T   +SGKV+I+G IK+ V ++++C+  + L N TV +Q
Sbjct: 125 DRLLSNSQLLSDVASGTLPLNTFVMMSGKVSILGFIKVHVVSSTSCNVPINLSNGTVGNQ 184

Query: 207 DCKTKAKI 214
           +C+ K K+
Sbjct: 185 ECQYKTKL 192

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356505663|ref|XP_003521609.1| PREDICTED: uncharacterized protein LOC100811806 [Glycine max]

 Score =  182 bits (463), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 87/188 (46%), Positives = 134/188 (71%), Gaps = 1/188 (0%)

Query: 28  SHRKRNICIGILVSIVAIVLLIVILALTVFKAKDPKTTINSITVQDVSIALDSARMRVNL 87
           S + R +C+ +   ++AIVLLIVILALTVFKAK P TT++S  ++D  ++LD  ++RV+L
Sbjct: 5   SGKGRKVCLTVTGVVIAIVLLIVILALTVFKAKHPVTTVDSTKLEDFHVSLDPVKLRVDL 64

Query: 88  NITLDVNVGIKNPNKVSMKLKKGNADIMYRGDTVGVVPIPVAKISADKTTALNMTVTILA 147
           N+TL V+V +KNPNKV  +     A + YRG  +G VPI   +IS+ +T   N+T+TI+A
Sbjct: 65  NVTLGVDVSVKNPNKVGFQYSDSTAHLNYRGQLIGEVPISAGEISSGETKGFNLTLTIMA 124

Query: 148 NRFLSNPQLFSDATAGSMPMSTMAKVSGKVNIVG-IKISVSATSTCHFTVFLGNRTVSDQ 206
           +R LSN QL SD T+G++P++T  ++SGKV+I+G IK+ V ++++C   + L N TV +Q
Sbjct: 125 DRLLSNSQLLSDVTSGTLPLNTFVRMSGKVSILGFIKVHVVSSTSCDVAINLSNGTVGNQ 184

Query: 207 DCKTKAKI 214
           +C+ K K+
Sbjct: 185 ECQYKTKL 192

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224140649|ref|XP_002323694.1| predicted protein [Populus trichocarpa] gi|222868324|gb|EEF05455.1| predicted protein [Populus trichocarpa]

 Score =  181 bits (460), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 86/193 (44%), Positives = 139/193 (72%), Gaps = 2/193 (1%)

Query: 24  KSGRSHRKRNICIGILVSIVAIVLLIVILAL-TVFKAKDPKTTINSITVQDVSIALDSAR 82
           +S + H++RNIC+G+  +++  + L++++   TVFK K P TT++S ++ D+ ++ D AR
Sbjct: 4   ESPKKHKRRNICLGVTAAVILFIFLLLLILGLTVFKPKQPTTTVDSTSISDMKVSFDIAR 63

Query: 83  MRVNLNITLDVNVGIKNPNKVSMKLKKGNADIMYRGDTVGVVPIPVAKISADKTTALNMT 142
           +RV++N++LDV++ IKNPNKVS+K K  +A + YRG  VG  PIP  KI ADKT  +N+T
Sbjct: 64  LRVDVNVSLDVDLSIKNPNKVSVKYKNSSAFLNYRGQVVGEAPIPAGKILADKTQPINVT 123

Query: 143 VTILANRFLSNPQLFSDATAGSMPMSTMAKVSGKVNIVGI-KISVSATSTCHFTVFLGNR 201
           VT++A+R LS+ Q FSD  AG++P +T+ K+SGK ++  +  + +++TS+C   VF+ NR
Sbjct: 124 VTLMADRLLSDSQFFSDVMAGTIPFNTLTKISGKASVFNLFNVHITSTSSCDLLVFVSNR 183

Query: 202 TVSDQDCKTKAKI 214
           T+ DQ CK K K+
Sbjct: 184 TIGDQKCKYKTKL 196

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356551245|ref|XP_003543987.1| PREDICTED: uncharacterized protein LOC100804569 [Glycine max]

 Score =  180 bits (456), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 87/188 (46%), Positives = 132/188 (70%), Gaps = 1/188 (0%)

Query: 28  SHRKRNICIGILVSIVAIVLLIVILALTVFKAKDPKTTINSITVQDVSIALDSARMRVNL 87
           S + R +C+ +   ++AIVLLIVILALTVFKAK P T ++S  ++D  ++LD  ++RV+L
Sbjct: 189 SGKGRKVCLTVTGVVIAIVLLIVILALTVFKAKHPVTIVDSTKLEDFHVSLDPVKLRVDL 248

Query: 88  NITLDVNVGIKNPNKVSMKLKKGNADIMYRGDTVGVVPIPVAKISADKTTALNMTVTILA 147
           N+TL V+V +KNPNKV  +     A + YRG  +G VPI   +IS+ +T   N+T TI+A
Sbjct: 249 NVTLGVDVSVKNPNKVGFQYSDSAAHLNYRGQLIGEVPISAGEISSGETKGFNLTHTIMA 308

Query: 148 NRFLSNPQLFSDATAGSMPMSTMAKVSGKVNIVG-IKISVSATSTCHFTVFLGNRTVSDQ 206
           +R LSN QL SD T+G++P+ST  ++SGKV+I+G IK+ V ++++C   + L N TV +Q
Sbjct: 309 DRLLSNSQLLSDVTSGTLPLSTFVRMSGKVSILGFIKVHVVSSTSCDVAINLSNGTVGNQ 368

Query: 207 DCKTKAKI 214
           +C+ K K+
Sbjct: 369 ECQYKTKL 376

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356566824|ref|XP_003551627.1| PREDICTED: uncharacterized protein LOC100802530 [Glycine max]

 Score =  154 bits (388), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 76/193 (39%), Positives = 126/193 (65%), Gaps = 2/193 (1%)

Query: 24  KSGRSHRKRNICIGI-LVSIVAIVLLIVILALTVFKAKDPKTTINSITVQDVSIALDSAR 82
           K G   +   +C+ + L  ++A+VLL VILA+TVFK + P T ++S+ +Q++S+ +D   
Sbjct: 2   KKGSGCKGSIVCLMVTLCVVIALVLLGVILAMTVFKPRHPITNVDSVRLQNMSLDMDIFS 61

Query: 83  MRVNLNITLDVNVGIKNPNKVSMKLKKGNADIMYRGDTVGVVPIPVAKISADKTTALNMT 142
           M VN+N+TL+V+V + NPNK+        A + YRG  +G  PIP   I A++   LN T
Sbjct: 62  MSVNVNLTLEVDVSVNNPNKLGFNYYNSYAQLNYRGQLIGEAPIPNGHILAEEIKGLNST 121

Query: 143 VTILANRFLSNPQLFSDATAGSMPMSTMAKVSGKVNIVG-IKISVSATSTCHFTVFLGNR 201
           +T++A+R +SN ++  D   G +P++++ ++ G+VN++G IK  V++TS+C FT+ L NR
Sbjct: 122 LTVMADRLVSNSEVTKDVALGLLPLNSLVRIFGQVNVLGFIKFYVASTSSCDFTLNLSNR 181

Query: 202 TVSDQDCKTKAKI 214
           T+ D  C+ K KI
Sbjct: 182 TIVDNKCQEKTKI 194

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|239056186|emb|CAQ58621.1| unknown [Vitis vinifera]

 Score =  152 bits (384), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 74/166 (44%), Positives = 114/166 (68%), Gaps = 4/166 (2%)

Query: 49  IVILALTVFKAKDPKTTINSITVQDVSIALDSARMRVNLNITLDVNVGIKNPNKVSMKLK 108
           +VIL  TVFKAKDP  T+ S++++D    LD +   +N+N +LDVNV ++NPN+V  +  
Sbjct: 1   MVILGFTVFKAKDPVITVGSVSLKD----LDFSLTPLNINASLDVNVSVRNPNRVGFRYN 56

Query: 109 KGNADIMYRGDTVGVVPIPVAKISADKTTALNMTVTILANRFLSNPQLFSDATAGSMPMS 168
             +A + Y G  VG  PIP  +I A KTT +N+ ++++A+R L NPQL+SD  +GS+P+S
Sbjct: 57  NASALLNYDGGLVGEAPIPAGRIGARKTTGMNIVISLMADRLLLNPQLYSDVLSGSLPLS 116

Query: 169 TMAKVSGKVNIVGIKISVSATSTCHFTVFLGNRTVSDQDCKTKAKI 214
           T  ++SGKV+++ +KI V +TSTC+ TV + N T+ D  C+ K K+
Sbjct: 117 TYTRISGKVSVLFVKIKVVSTSTCNMTVDVKNGTLKDTVCQYKTKL 162

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

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Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	214
TAIR|locus:2080320	235	AT3G54200 "AT3G54200" [Arabido	0.738	0.672	0.402	8.8e-31
TAIR|locus:2062917	221	AT2G46150 "AT2G46150" [Arabido	0.850	0.823	0.291	2.5e-17
TAIR|locus:504955821	189	AT3G05975 "AT3G05975" [Arabido	0.733	0.830	0.3	3.8e-14
TAIR|locus:2142040	215	AT4G13270 "AT4G13270" [Arabido	0.691	0.688	0.243	6.6e-10
TAIR|locus:2128464	228	AT4G23610 "AT4G23610" [Arabido	0.658	0.618	0.241	2.5e-05
TAIR|locus:2014250	342	AT1G64450 [Arabidopsis thalian	0.387	0.242	0.258	0.00039
TAIR|locus:1006230721	214	AT1G64065 "AT1G64065" [Arabido	0.682	0.682	0.22	0.00043
TAIR|locus:2138136	187	AT4G23930 "AT4G23930" [Arabido	0.626	0.716	0.194	0.00051

TAIR|locus:2080320 AT3G54200 "AT3G54200" [Arabidopsis thaliana (taxid:3702)]

 Score = 339 (124.4 bits), Expect = 8.8e-31, P = 8.8e-31
 Identities = 64/159 (40%), Positives = 105/159 (66%)

Query:    57 FKAKDPKTTINSITVQDVSIALDSARMRVNLNITLDVNVGIKNPNKVSMKLKKGNADIMY 116
             FK K P TTI+S+TV  +  +++   ++V LN+TL+V++ +KNPN++       +A + Y
Sbjct:    77 FKPKRPTTTIDSVTVDRLQASVNPLLLKVLLNLTLNVDLSLKNPNRIGFSYDSSSALLNY 136

Query:   117 RGDTVGVVPIPVAKISADKTTALNMTVTILANRFLSNPQLFSDATAGSMPMSTMAKVSGK 176
             RG  +G  P+P  +I+A KT  LN+T+T++A+R LS  QL SD  AG +P++T  KV+GK
Sbjct:   137 RGQVIGEAPLPANRIAARKTVPLNITLTLMADRLLSETQLLSDVMAGVIPLNTFVKVTGK 196

Query:   177 VNIVGI-KISVSATSTCHFTVFLGNRTVSDQDCKTKAKI 214
             V ++ I KI V ++S+C  ++ + +R V+ Q CK   K+
Sbjct:   197 VTVLKIFKIKVQSSSSCDLSISVSDRNVTSQHCKYSTKL 235

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0046658 "anchored to plasma membrane" evidence=IDA

GO:0005886 "plasma membrane" evidence=IDA

GO:0009506 "plasmodesma" evidence=IDA

TAIR|locus:2062917 AT2G46150 "AT2G46150" [Arabidopsis thaliana (taxid:3702)]

 Score = 212 (79.7 bits), Expect = 2.5e-17, P = 2.5e-17
 Identities = 56/192 (29%), Positives = 91/192 (47%)

Query:    28 SHRKRN-----ICIGXXXXXXXXXXXXXXXXXXXFKAKDPKTTINSITVQDVSIALDSAR 82
             +HR RN     IC+                    F+ KDP   +N + V  +     + +
Sbjct:    29 THRSRNRIKCSICV--TATSLILTTIVLTLVFTVFRVKDPIIKMNGVMVNGLDSVTGTNQ 86

Query:    83 MRV-NLNITLDVNVGIKNPNKVSMKLKKGNADIMYRGDTVGVVPIPVAKISADKTTALNM 141
             +++   NI++ V+V +KNPN  S K      DI Y+G  VG       K    +T+ +N+
Sbjct:    87 VQLLGTNISMIVDVSVKNPNTASFKYSNTTTDIYYKGTLVGEAHGLPGKARPHRTSRMNV 146

Query:   142 TVTILANRFLSNPQLFSDAT-AGSMPMSTMAKVSGKVNIVGI-KISVSATSTCHFTVFLG 199
             TV I+ +R LS+P L  + + +G + + +  +V GKV I+GI K  V+    C   V + 
Sbjct:   147 TVDIMLDRILSDPGLGREISRSGLVNVWSYTRVGGKVKIMGIVKKHVTVKMNCTMAVNIT 206

Query:   200 NRTVSDQDCKTK 211
              + + D DCK K
Sbjct:   207 GQAIQDVDCKKK 218

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0005886 "plasma membrane" evidence=IDA

TAIR|locus:504955821 AT3G05975 "AT3G05975" [Arabidopsis thaliana (taxid:3702)]

 Score = 182 (69.1 bits), Expect = 3.8e-14, P = 3.8e-14
 Identities = 48/160 (30%), Positives = 78/160 (48%)

Query:    57 FKAKDPKTTINSITVQDVSIALDSARMRVNLNITLDVNVGIKNPNKVSMKLKKGNADIMY 116
             FK K P     S TV  +S  + S    V LN TL + + +KNPN    + K     + Y
Sbjct:    31 FKPKHPILQTVSSTVDGISTNI-SLPYEVQLNFTLTLEMLLKNPNVADFEYKTVENLVYY 89

Query:   117 RGDTVGVVPIPVAKISADKTTALNMTVTILANRFLSN-PQLFSDATAGSMPMSTMAKVSG 175
             R   VG + +P + + A  +  L   + +  ++F++N   +  D   G + M T AK+ G
Sbjct:    90 RDTLVGNLTLPSSTLPAKGSVLLPCPLFLQLDKFVANLGDIVQDVLHGKIVMETRAKMPG 149

Query:   176 KVNIVGI-KISVSATSTCHFTVFLGNRTVSDQDCKTKAKI 214
             K+ ++GI KI + + S C+  +   +  V DQ C  K K+
Sbjct:   150 KITLLGIFKIPLDSISHCNLVLGFPSMVVEDQVCDLKTKL 189

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2142040 AT4G13270 "AT4G13270" [Arabidopsis thaliana (taxid:3702)]

 Score = 142 (55.0 bits), Expect = 6.6e-10, P = 6.6e-10
 Identities = 37/152 (24%), Positives = 75/152 (49%)

Query:    61 DPKTTINSITVQDVSIALDSARMRVNLNITLDVNVGIKNPNKVSMKLKKGNADIMYRGDT 120
             DP  T++ I +  +S+ +DS ++ ++L+ +L + V  +N +  S+        I YRG  
Sbjct:    67 DPDITVSRINLNHISV-VDSHKIALDLSFSLTIKV--RNRDFFSLDYDSLVVSIGYRGRE 123

Query:   121 VGVVPIPVAKISADKTTALNMTVTILANRFLSNP-QLFSDATAGSMPMSTMAKVSGKVNI 179
             +G+V      + A  ++ ++ T+ +     + +   L  D   G +P  T+A+V G + +
Sbjct:   124 LGLVKSKGGHLKARDSSYIDATLELDGLEVVHDVIYLIGDLAKGVIPFDTIAQVQGDLGV 183

Query:   180 VGIKISVSATSTCHFTVFLGNRTVSDQDCKTK 211
             +   I +    +C   V + N+ +S QDC  K
Sbjct:   184 LLFNIPIQGKVSCEVYVNVNNQKISHQDCHRK 215

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0000902 "cell morphogenesis" evidence=RCA

GO:0016049 "cell growth" evidence=RCA

GO:0048193 "Golgi vesicle transport" evidence=RCA

TAIR|locus:2128464 AT4G23610 "AT4G23610" [Arabidopsis thaliana (taxid:3702)]

 Score = 115 (45.5 bits), Expect = 2.5e-05, P = 2.5e-05
 Identities = 36/149 (24%), Positives = 66/149 (44%)

Query:    57 FKAKDPKTTINSITVQDVSIALDSARMRVNLNITLDVNVGIKNPNKVSMKLKKGNADIMY 116
             F    P  T++SI+         + ++  N N T+ V + + NPN     +K  N    Y
Sbjct:    74 FHLHSPNLTVDSISFNQ-RFDFVNGKVNTNQNTTVSVEISLHNPNPALFIVKNVNVSF-Y 131

Query:   117 RGDTVGVVPIPVAK---ISADKTTALNMTVTILANRFLSN-PQLFSDATAGSMPMSTMAK 172
              G+ V VV   + +   I A +T  +N+T  I+  + L++ P L  D     + + +  +
Sbjct:   132 HGELV-VVGESIRRSETIPAKRTVKMNLTAEIVKTKLLASLPGLMEDLNGRGVDLKSSVE 190

Query:   173 VSGKVNIVGI-KISVSATSTCHFTVFLGN 200
             V G+V  + I + +V   + C   +   N
Sbjct:   191 VRGRVKKMKIFRKTVHLQTDCFMKMTTNN 219

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2014250 AT1G64450 [Arabidopsis thaliana (taxid:3702)]

 Score = 109 (43.4 bits), Expect = 0.00039, P = 0.00039
 Identities = 23/89 (25%), Positives = 46/89 (51%)

Query:    57 FKAKDPKTTINSITVQDVSIALDSARMRVNLNITLDVNVGIKNPNKVSMKLKKGNADIMY 116
             FK KDPK ++N++ +   +++ ++A      N +    V ++NPN+        +  ++Y
Sbjct:    41 FKPKDPKISVNAVQLPSFAVSNNTA------NFSFSQYVAVRNPNRAVFSHYDSSIQLLY 94

Query:   117 RGDTVGVVPIPVAKISADKTTALNMTVTI 145
              G+ VG + IP  KI + +   +  T T+
Sbjct:    95 SGNQVGFMFIPAGKIDSGRIQYMAATFTV 123

GO:0005576 "extracellular region" evidence=ISM

GO:0048451 "petal formation" evidence=RCA

GO:0048453 "sepal formation" evidence=RCA

TAIR|locus:1006230721 AT1G64065 "AT1G64065" [Arabidopsis thaliana (taxid:3702)]

 Score = 105 (42.0 bits), Expect = 0.00043, P = 0.00043
 Identities = 33/150 (22%), Positives = 67/150 (44%)

Query:    62 PKTTINSITVQDVSIALDSARMRVNLNITLDVNVGIKNPNKVSMKLKKGNADIMYRGD-T 120
             P+    SI+ +D+    +S     N  +  D++  I+N N  + + +     ++Y     
Sbjct:    67 PEIETRSISTRDLRSGGNSTNPYFNATLVSDIS--IRNSNFGAFEFEDSTLRVVYADHGV 124

Query:   121 VGVVPIPVAKISADKTTALN-MTVTILANRFLSNPQLFSDATAGSMPMSTMAKVSGKVNI 179
             VG   I   ++ A KT  +  + V I + R L    L  D   G + + ++A+V G++ +
Sbjct:   125 VGETKIEGRRVEAHKTVRITGVVVEIGSFRLLDTKDLDKDLRLGFLELRSVAEVRGRIKV 184

Query:   180 VGIKISVSATSTCHFTVFLGNRTVSDQDCK 209
             +G K    +  +C   + L  R + +  C+
Sbjct:   185 LGRKRWKVSVMSCTMRLNLTGRFIQNLLCE 214

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0016020 "membrane" evidence=ISS

TAIR|locus:2138136 AT4G23930 "AT4G23930" [Arabidopsis thaliana (taxid:3702)]

 Score = 103 (41.3 bits), Expect = 0.00051, P = 0.00051
 Identities = 29/149 (19%), Positives = 70/149 (46%)

Query:    57 FKAKDPKTTINSITVQDVSIALDSARMRVNLNITLDVNVGIKNPNKVSMKLKKGNADIMY 116
             F+ +DP+ ++ S+ V   S+A  S      ++ T      ++NPN+ +         + Y
Sbjct:    33 FRPRDPEISVTSVKVPSFSVANSS------VSFTFSQFSAVRNPNRAAFSHYNNVIQLFY 86

Query:   117 RGDTVGVVPIPVAKISADKTTALNMTVTILANRFL--SNPQL----F--SDATAGSMPMS 168
              G+ +G   +P  +I + +T  +  T ++ +      S+ Q+    F  SD +  ++ + 
Sbjct:    87 YGNRIGYTFVPAGEIESGRTKRMLATFSVQSFPLAAASSSQISAAQFQNSDRSGSTVEIE 146

Query:   169 TMAKVSGKVNIVGIKIS-VSATSTCHFTV 196
             +  +++G+V ++G+    ++A   C   +
Sbjct:   147 SKLEMAGRVRVLGLFTHRIAAKCNCRIAI 175


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.316   0.130   0.362    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      214       180   0.00092  109 3  11 22  0.43    32
                                                     31  0.39    35


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  8
  No. of states in DFA:  538 (57 KB)
  Total size of DFA:  120 KB (2079 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  15.34u 0.13s 15.47t   Elapsed:  00:00:01
  Total cpu time:  15.34u 0.13s 15.47t   Elapsed:  00:00:01
  Start:  Fri May 10 01:21:22 2013   End:  Fri May 10 01:21:23 2013

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=ISM

GO:0008150 "biological_process" evidence=ND

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	214
PLN03160	219	PLN03160, PLN03160, uncharacterized protein; Provi	6e-35
pfam03168	98	pfam03168, LEA_2, Late embryogenesis abundant prot	2e-05

>gnl|CDD|215609 PLN03160, PLN03160, uncharacterized protein; Provisional

 Score =  122 bits (309), Expect = 6e-35
 Identities = 69/210 (32%), Positives = 110/210 (52%), Gaps = 7/210 (3%)

Query: 7   PIAPSAAAGQADKPKPPKSGRSHRKRNICIGILVSIVAIVLL----IVILALTVFKAKDP 62
           P+AP+A   ++D+ +     +  R+RN CI     I A +L+    I++L  TVF+ KDP
Sbjct: 9   PLAPAAFRLRSDEEEATNHLKKTRRRN-CIKCCGCITATLLILATTILVLVFTVFRVKDP 67

Query: 63  KTTINSITVQDVSIALDSARMRVNLNITLDVNVGIKNPNKVSMKLKKGNADIMYRGDTVG 122
              +N +TV  + +  ++  +R   NITL  +V +KNPN  S K       I Y G  VG
Sbjct: 68  VIKMNGVTVTKLELINNTT-LRPGTNITLIADVSVKNPNVASFKYSNTTTTIYYGGTVVG 126

Query: 123 VVPIPVAKISADKTTALNMTVTILANRFLSNPQLFSDATAGSMPMSTMAKVSGKVNIVGI 182
               P  K  A +T  +N+TV I+ ++ LS P L +D ++G + M++  ++ GKV I+ I
Sbjct: 127 EARTPPGKAKARRTMRMNVTVDIIPDKILSVPGLLTDISSGLLNMNSYTRIGGKVKILKI 186

Query: 183 -KISVSATSTCHFTVFLGNRTVSDQDCKTK 211
            K  V     C  TV + ++ +  Q CK  
Sbjct: 187 IKKHVVVKMNCTMTVNITSQAIQGQKCKRH 216

Length = 219

>gnl|CDD|217400 pfam03168, LEA_2, Late embryogenesis abundant protein

 Score = 42.0 bits (99), Expect = 2e-05
 Identities = 17/91 (18%), Positives = 32/91 (35%), Gaps = 4/91 (4%)

Query: 94  NVGIKNPNKVSMKLKKGNADIMYRGDTVGV-VPIPVAKISADKTTALNMTVTILANRFLS 152
            + ++NPN   +     + D+ Y G  +          + A  TT L + VT+  +    
Sbjct: 1   TLRVRNPNSFPLPYDGLSYDLSYNGQELASGTSPQPGTVPAGGTTTLEVPVTVSLDDL-- 58

Query: 153 NPQLFSDATAGSMPMSTMAKVSGKVNIVGIK 183
             +L  D  A  + +    +   KV      
Sbjct: 59  -ARLLKDLLAVGLELPYTLRGRLKVGGPVKG 88

Different types of LEA proteins are expressed at different stages of late embryogenesis in higher plant seed embryos and under conditions of dehydration stress. The function of these proteins is unknown. This family represents a group of LEA proteins that appear to be distinct from those in pfam02987. The family DUF1511, pfam07427, has now been merged into this family. Length = 98

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	214
PLN03160	219	uncharacterized protein; Provisional	100.0
PF03168	101	LEA_2: Late embryogenesis abundant protein; InterP	99.51
smart00769	100	WHy Water Stress and Hypersensitive response.	98.88
PF07092	238	DUF1356: Protein of unknown function (DUF1356); In	98.56
COG5608	161	LEA14-like dessication related protein [Defense me	97.83
PF12751	387	Vac7: Vacuolar segregation subunit 7; InterPro: IP	97.76
PLN03160	219	uncharacterized protein; Provisional	94.41
PF06072	60	Herpes_US9: Alphaherpesvirus tegument protein US9;	87.29
PF04478	154	Mid2: Mid2 like cell wall stress sensor; InterPro:	83.82
PF14927	140	Neurensin: Neurensin	80.87

>PLN03160 uncharacterized protein; Provisional

Probab=100.00  E-value=2.4e-49  Score=328.52  Aligned_cols=212  Identities=30%  Similarity=0.529  Sum_probs=190.4

Q ss_pred             CCCCcccCCCcccCCCCCCC--CCCCCcCCcceeEeehHHHH-HHHHHHHHHheeeEEEeeCCCeEEEEEEEEeeEEeee
Q 028071            2 DPEEAPIAPSAAAGQADKPK--PPKSGRSHRKRNICIGILVS-IVAIVLLIVILALTVFKAKDPKTTINSITVQDVSIAL   78 (214)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~c~~C~~~~~~-lill~~v~~~i~~lv~rPk~P~~~v~~~~v~~~~~~~   78 (214)
                      +|..+||||++.+.++|||.  ++.+.++||+|.+||+|+++ +++|++++++++|++||||+|+|+++++++++|+++.
T Consensus         4 ~~~~~p~a~~~~~~~~d~~~~~~~~~~~~r~~~~~c~~~~~a~~l~l~~v~~~l~~~vfrPk~P~~~v~~v~l~~~~~~~   83 (219)
T PLN03160          4 TEQVRPLAPAAFRLRSDEEEATNHLKKTRRRNCIKCCGCITATLLILATTILVLVFTVFRVKDPVIKMNGVTVTKLELIN   83 (219)
T ss_pred             cccCCCCCCCcccccCchhhcCcchhccccccceEEHHHHHHHHHHHHHHHHheeeEEEEccCCeEEEEEEEEeeeeecc
Confidence            56789999999999999973  33344577788888888777 7777888888999999999999999999999999974


Q ss_pred             cCcCcceeEeEEEEEEEEEECCCceeEEEeceEEEEEECCEEEeceEeCCceecCCCceEEEEEEEEEeeeecCCcchhc
Q 028071           79 DSARMRVNLNITLDVNVGIKNPNKVSMKLKKGNADIMYRGDTVGVVPIPVAKISADKTTALNMTVTILANRFLSNPQLFS  158 (214)
Q Consensus        79 ~~~~~~~~ln~~l~~~v~v~NPN~~~i~y~~~~~~v~Y~g~~lg~~~vp~f~q~~~~t~~v~~~l~~~~~~l~~~~~l~~  158 (214)
                      + ...+..+|+++.++++++|||+++|+|+++++.++|+|+.+|++.+|+|+|++++++.+++++.+.+.++.++++|.+
T Consensus        84 ~-~~~~~~~n~tl~~~v~v~NPN~~~~~Y~~~~~~v~Y~g~~vG~a~~p~g~~~ar~T~~l~~tv~~~~~~~~~~~~L~~  162 (219)
T PLN03160         84 N-TTLRPGTNITLIADVSVKNPNVASFKYSNTTTTIYYGGTVVGEARTPPGKAKARRTMRMNVTVDIIPDKILSVPGLLT  162 (219)
T ss_pred             C-CCCceeEEEEEEEEEEEECCCceeEEEcCeEEEEEECCEEEEEEEcCCcccCCCCeEEEEEEEEEEeceeccchhHHH
Confidence            3 223568999999999999999999999999999999999999999999999999999999999888877766788999


Q ss_pred             cccCCcEEeEEEEEEEEEEEEEe-EeeeEEEEEEeEEEEEcCCceEEcccccccccC
Q 028071          159 DATAGSMPMSTMAKVSGKVNIVG-IKISVSATSTCHFTVFLGNRTVSDQDCKTKAKI  214 (214)
Q Consensus       159 d~~~g~v~l~v~~~~~~~v~v~g-~k~~~~~~v~C~v~v~~~~~~~~~~~C~~~~k~  214 (214)
                      |+++|.++|+++++++||++++| ++.+++.+++|++.++.++..+++++|+.++++
T Consensus       163 D~~~G~v~l~~~~~v~gkVkv~~i~k~~v~~~v~C~v~V~~~~~~i~~~~C~~~~~~  219 (219)
T PLN03160        163 DISSGLLNMNSYTRIGGKVKILKIIKKHVVVKMNCTMTVNITSQAIQGQKCKRHVDL  219 (219)
T ss_pred             HhhCCeEEEEEEEEEEEEEEEEEEEEEEEEEEEEeEEEEECCCCEEeccEecccccC
Confidence            99999999999999999999888 777999999999999999999999999999886

>PF03168 LEA_2: Late embryogenesis abundant protein; InterPro: IPR004864 Different types of LEA proteins are expressed at different stages of late embryogenesis in higher plant seed embryos and under conditions of dehydration stress [, ]

Probab=99.51  E-value=8.2e-14  Score=101.10  Aligned_cols=97  Identities=24%  Similarity=0.429  Sum_probs=73.8

Q ss_pred             EEEEECCCceeEEEeceEEEEEECCEEEe-ceEeCCceecCCCceEEEEEEEEEeeeecCCcchhccccCCcEEeEEEEE
Q 028071           94 NVGIKNPNKVSMKLKKGNADIMYRGDTVG-VVPIPVAKISADKTTALNMTVTILANRFLSNPQLFSDATAGSMPMSTMAK  172 (214)
Q Consensus        94 ~v~v~NPN~~~i~y~~~~~~v~Y~g~~lg-~~~vp~f~q~~~~t~~v~~~l~~~~~~l~~~~~l~~d~~~g~v~l~v~~~  172 (214)
                      +++++|||.++++|++.+++++|+|+.+| ....++|+|++++++.+.+.+++....+  ...+.++. +|..++++..+
T Consensus         1 ~l~v~NPN~~~i~~~~~~~~v~~~g~~v~~~~~~~~~~i~~~~~~~v~~~v~~~~~~l--~~~l~~~~-~~~~~~~v~~~   77 (101)
T PF03168_consen    1 TLSVRNPNSFGIRYDSIEYDVYYNGQRVGTGGSLPPFTIPARSSTTVPVPVSVDYSDL--PRLLKDLL-AGRVPFDVTYR   77 (101)
T ss_dssp             EEEEEESSSS-EEEEEEEEEEEESSSEEEEEEECE-EEESSSCEEEEEEEEEEEHHHH--HHHHHHHH-HTTSCEEEEEE
T ss_pred             CEEEECCCceeEEEeCEEEEEEECCEEEECccccCCeEECCCCcEEEEEEEEEcHHHH--HHHHHhhh-ccccceEEEEE
Confidence            58999999999999999999999999999 7788999999999999999887775444  23444555 66778888889


Q ss_pred             EEEEEEEEe--EeeeEEEEEEeE
Q 028071          173 VSGKVNIVG--IKISVSATSTCH  193 (214)
Q Consensus       173 ~~~~v~v~g--~k~~~~~~v~C~  193 (214)
                      +++++++.+  +..+..+.++|+
T Consensus        78 ~~g~~~v~~~~~~~~~~v~~~~~  100 (101)
T PF03168_consen   78 IRGTFKVLGTPIFGSVRVPVSCE  100 (101)
T ss_dssp             EEEEEE-EE-TTTSCEEEEEEEE
T ss_pred             EEEEEEEcccceeeeEEEeEEeE
Confidence            999999633  333445555443

The function of these proteins is unknown. ; PDB: 3BUT_A 1XO8_A 1YYC_A.

>smart00769 WHy Water Stress and Hypersensitive response

Probab=98.88  E-value=2.1e-08  Score=73.37  Aligned_cols=85  Identities=22%  Similarity=0.365  Sum_probs=68.4

Q ss_pred             eeEeEEEEEEEEEECCCceeEEEeceEEEEEECCEEEeceEeC-CceecCCCceEEEEEEEEEeeeecCCcchhccccCC
Q 028071           85 VNLNITLDVNVGIKNPNKVSMKLKKGNADIMYRGDTVGVVPIP-VAKISADKTTALNMTVTILANRFLSNPQLFSDATAG  163 (214)
Q Consensus        85 ~~ln~~l~~~v~v~NPN~~~i~y~~~~~~v~Y~g~~lg~~~vp-~f~q~~~~t~~v~~~l~~~~~~l~~~~~l~~d~~~g  163 (214)
                      ..++.++.+.++++|||.+++.|++.+.+++|+|..+|++..+ ++.+++++++.+.+++++..   .....+..++.+|
T Consensus        11 ~~~~~~~~l~l~v~NPN~~~l~~~~~~y~l~~~g~~v~~g~~~~~~~ipa~~~~~v~v~~~~~~---~~~~~~~~~l~~~   87 (100)
T smart00769       11 SGLEIEIVLKVKVQNPNPFPIPVNGLSYDLYLNGVELGSGEIPDSGTLPGNGRTVLDVPVTVNL---FLAEALIWHIANG   87 (100)
T ss_pred             cceEEEEEEEEEEECCCCCccccccEEEEEEECCEEEEEEEcCCCcEECCCCcEEEEEEEEeeh---hHhHHHHHhhccC
Confidence            3678899999999999999999999999999999999999985 79999999999999988732   1124556666555


Q ss_pred             c-EEeEEEEE
Q 028071          164 S-MPMSTMAK  172 (214)
Q Consensus       164 ~-v~l~v~~~  172 (214)
                      . ++++++++
T Consensus        88 ~~~~y~l~g~   97 (100)
T smart00769       88 EEIPYRLDGK   97 (100)
T ss_pred             CCccEEEEEE
Confidence            3 55554443

>PF07092 DUF1356: Protein of unknown function (DUF1356); InterPro: IPR009790 This family consists of several hypothetical mammalian proteins of around 250 residues in length

Probab=98.56  E-value=2.6e-05  Score=65.14  Aligned_cols=85  Identities=16%  Similarity=0.241  Sum_probs=65.5

Q ss_pred             EeeCCCeEEEEEEEEeeEEeeecCcCcceeEeEEEEEEEEEECCCceeEEEeceEEEEEECCEEEeceEeCC-ceecCCC
Q 028071           57 FKAKDPKTTINSITVQDVSIALDSARMRVNLNITLDVNVGIKNPNKVSMKLKKGNADIMYRGDTVGVVPIPV-AKISADK  135 (214)
Q Consensus        57 ~rPk~P~~~v~~~~v~~~~~~~~~~~~~~~ln~~l~~~v~v~NPN~~~i~y~~~~~~v~Y~g~~lg~~~vp~-f~q~~~~  135 (214)
                      +-||.-.++-.++......++..    ...+..++.-.++++|||.+++.-.+.++++.|....+|++.... ..++|++
T Consensus        96 LfPRsV~v~~~gv~s~~V~f~~~----~~~v~l~itn~lNIsN~NFy~V~Vt~~s~qv~~~~~VVG~~~~~~~~~I~Prs  171 (238)
T PF07092_consen   96 LFPRSVTVSPVGVKSVTVSFNPD----KSTVQLNITNTLNISNPNFYPVTVTNLSIQVLYMKTVVGKGKNSNITVIGPRS  171 (238)
T ss_pred             EeCcEEEEecCcEEEEEEEEeCC----CCEEEEEEEEEEEccCCCEEEEEEEeEEEEEEEEEeEEeeeEecceEEecccC
Confidence            44987666555544444444421    345777888999999999999999999999999999999998765 4788998


Q ss_pred             ceEEEEEEEE
Q 028071          136 TTALNMTVTI  145 (214)
Q Consensus       136 t~~v~~~l~~  145 (214)
                      .+.+.+++..
T Consensus       172 ~~q~~~tV~t  181 (238)
T PF07092_consen  172 SKQVNYTVKT  181 (238)
T ss_pred             CceEEEEeeE
Confidence            8888877554

The function of this family is unknown.

>COG5608 LEA14-like dessication related protein [Defense mechanisms]

Probab=97.83  E-value=0.0023  Score=49.90  Aligned_cols=106  Identities=10%  Similarity=0.175  Sum_probs=74.0

Q ss_pred             eCCCeEEEEEEEEeeEEeeecCcCcceeEeEEEEEEEEEECCCceeEEEeceEEEEEECCEEEeceE-eCCceecCCCce
Q 028071           59 AKDPKTTINSITVQDVSIALDSARMRVNLNITLDVNVGIKNPNKVSMKLKKGNADIMYRGDTVGVVP-IPVAKISADKTT  137 (214)
Q Consensus        59 Pk~P~~~v~~~~v~~~~~~~~~~~~~~~ln~~l~~~v~v~NPN~~~i~y~~~~~~v~Y~g~~lg~~~-vp~f~q~~~~t~  137 (214)
                      -+.|.+.--.+..-.  ++        .....+-.++.++|||.+.+--.+.+..++-+|..+|++. ..++.++|++..
T Consensus        30 ~~~p~ve~~ka~wGk--vt--------~s~~EiV~t~KiyNPN~fPipVtgl~y~vymN~Iki~eG~~~k~~~v~p~S~~   99 (161)
T COG5608          30 VKKPGVESMKAKWGK--VT--------NSETEIVGTLKIYNPNPFPIPVTGLQYAVYMNDIKIGEGEILKGTTVPPNSRE   99 (161)
T ss_pred             cCCCCceEEEEEEEE--Ee--------ccceEEEEEEEecCCCCcceeeeceEEEEEEcceEeeccccccceEECCCCeE
Confidence            345665554444443  33        1233678899999999999999999999999999999987 577999999999


Q ss_pred             EEEEEEEEEeeeecCCcchhccccCCcE-EeEEEEEEEEEEE
Q 028071          138 ALNMTVTILANRFLSNPQLFSDATAGSM-PMSTMAKVSGKVN  178 (214)
Q Consensus       138 ~v~~~l~~~~~~l~~~~~l~~d~~~g~v-~l~v~~~~~~~v~  178 (214)
                      ++.+++..+...+.  ..+...+.+|+= ++  ++++.+.++
T Consensus       100 tvdv~l~~d~~~~k--e~w~~hi~ngErs~I--r~~i~~~v~  137 (161)
T COG5608         100 TVDVPLRLDNSKIK--EWWVTHIENGERSTI--RVRIKGVVK  137 (161)
T ss_pred             EEEEEEEEehHHHH--HHHHHHhhccCcccE--EEEEEEEEE
Confidence            99999877653331  233445556652 33  334455555

>PF12751 Vac7: Vacuolar segregation subunit 7; InterPro: IPR024260 Vac7 is localised at the vacuole membrane, a location which is consistent with its involvement in vacuole morphology and inheritance []

Probab=97.76  E-value=0.00016  Score=64.25  Aligned_cols=60  Identities=25%  Similarity=0.453  Sum_probs=40.9

Q ss_pred             EEeeCCCeEEEEEEEEeeEEeeecCcCcceeEeEEEEEEEEEECCCceeEEEeceEEEEEECCEEEec
Q 028071           56 VFKAKDPKTTINSITVQDVSIALDSARMRVNLNITLDVNVGIKNPNKVSMKLKKGNADIMYRGDTVGV  123 (214)
Q Consensus        56 v~rPk~P~~~v~~~~v~~~~~~~~~~~~~~~ln~~l~~~v~v~NPN~~~i~y~~~~~~v~Y~g~~lg~  123 (214)
                      +|--.+|--.|+=+.++++-.+        .=..-|++.|.+.|||.+.|.-++.++.|+-+-..+|.
T Consensus       323 v~AttKpL~~v~v~~I~NVlaS--------~qELmfdl~V~A~NPn~~~V~I~d~dldIFAKS~yvg~  382 (387)
T PF12751_consen  323 VFATTKPLTDVQVVSIQNVLAS--------EQELMFDLTVEAFNPNWFTVTIDDMDLDIFAKSRYVGT  382 (387)
T ss_pred             hhhcCcccccceEEEeeeeeec--------cceEEEeeEEEEECCCeEEEEeccceeeeEecCCccCc
Confidence            3445566555555555554333        12235889999999999999999999999976655553

Vac7 has been shown to function as an upstream regulator of the Fab1 lipid kinase pathway []. The Fab1 lipid pathway is important for correct regulation of membrane trafficking events.

>PLN03160 uncharacterized protein; Provisional

Probab=94.41  E-value=1.5  Score=36.53  Aligned_cols=47  Identities=15%  Similarity=0.186  Sum_probs=28.3

Q ss_pred             CcCCcce-eEeehHHHHHHHHHHHHHheeeEEEeeC--CCeEEEEEEEEe
Q 028071           26 GRSHRKR-NICIGILVSIVAIVLLIVILALTVFKAK--DPKTTINSITVQ   72 (214)
Q Consensus        26 ~~~~~~c-~~C~~~~~~lill~~v~~~i~~lv~rPk--~P~~~v~~~~v~   72 (214)
                      .++..+| .|++++++++++++++++++++=.=.|+  .-.++++++.+.
T Consensus        33 r~~~~~c~~~~~a~~l~l~~v~~~l~~~vfrPk~P~~~v~~v~l~~~~~~   82 (219)
T PLN03160         33 RRNCIKCCGCITATLLILATTILVLVFTVFRVKDPVIKMNGVTVTKLELI   82 (219)
T ss_pred             cccceEEHHHHHHHHHHHHHHHHheeeEEEEccCCeEEEEEEEEeeeeec
Confidence            3444545 4556667775555555555666567776  466677777664

>PF06072 Herpes_US9: Alphaherpesvirus tegument protein US9; InterPro: IPR009278 This family consists of several US9 and related proteins from the Alphaherpesviruses

Probab=87.29  E-value=0.029  Score=36.71  Aligned_cols=18  Identities=22%  Similarity=0.469  Sum_probs=11.3

Q ss_pred             CCCcCCcceeEeehHHHH
Q 028071           24 KSGRSHRKRNICIGILVS   41 (214)
Q Consensus        24 ~~~~~~~~c~~C~~~~~~   41 (214)
                      .+.||||+|..|.++++.
T Consensus        24 ~~r~RrRrc~~~v~~v~~   41 (60)
T PF06072_consen   24 ASRRRRRRCRLAVAIVFA   41 (60)
T ss_pred             HHHHHHHHHHHHHHHHHH
Confidence            444567777766666555

The function of the US9 protein is unknown although in Bovine herpesvirus 5 Us9 is essential for the anterograde spread of the virus from the olfactory mucosa to the bulb [].; GO: 0019033 viral tegument

>PF04478 Mid2: Mid2 like cell wall stress sensor; InterPro: IPR007567 This family represents a region near the C terminus of Mid2, which contains a transmembrane region

Probab=83.82  E-value=1.5  Score=34.36  Aligned_cols=19  Identities=5%  Similarity=0.198  Sum_probs=12.8

Q ss_pred             HHHHHheeeEEEeeCCCeE
Q 028071           46 VLLIVILALTVFKAKDPKT   64 (214)
Q Consensus        46 ~~v~~~i~~lv~rPk~P~~   64 (214)
                      ++++++++|+..|+|+-+|
T Consensus        64 l~il~lvf~~c~r~kktdf   82 (154)
T PF04478_consen   64 LGILALVFIFCIRRKKTDF   82 (154)
T ss_pred             HHHHHhheeEEEecccCcc
Confidence            3445566888888887544

The remainder of the protein sequence is serine-rich and of low complexity, and is therefore impossible to align accurately. Mid2 is thought to act as a mechanosensor of cell wall stress. The C-terminal cytoplasmic region of Mid2 is known to interact with Rom2, a guanine nucleotide exchange factor (GEF) for Rho1, which is part of the cell wall integrity signalling pathway [].

>PF14927 Neurensin: Neurensin

Probab=80.87  E-value=2.1  Score=33.24  Aligned_cols=29  Identities=3%  Similarity=-0.033  Sum_probs=19.2

Q ss_pred             eehHHHHHHHHHHHHHheeeEEEeeCCCeEE
Q 028071           35 CIGILVSIVAIVLLIVILALTVFKAKDPKTT   65 (214)
Q Consensus        35 C~~~~~~lill~~v~~~i~~lv~rPk~P~~~   65 (214)
                      |+++.+++++++++++++.|++  |++++..
T Consensus        47 ~~i~g~l~Ll~Gi~~l~vgY~v--P~~~e~~   75 (140)
T PF14927_consen   47 GFISGLLLLLLGIVALTVGYLV--PPKIEVF   75 (140)
T ss_pred             HHHHHHHHHHHHHHHHHhhccc--CCcceec
Confidence            3344333677777778888887  7766655

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	214
1yyc_A	174	LEA protein, putative late embryogenesis abundant	98.86
1xo8_A	151	AT1G01470; structural genomics, protein structure	98.65
3but_A	136	Uncharacterized protein AF_0446; lipid binding pro	98.33

>1yyc_A LEA protein, putative late embryogenesis abundant protein; structural genomics, protein structure initiative, CESG; NMR {Arabidopsis thaliana}

Probab=98.86  E-value=6.9e-09  Score=82.19  Aligned_cols=103  Identities=17%  Similarity=0.218  Sum_probs=82.6

Q ss_pred             CCCeEEEEEEEEeeEEeeecCcCcceeEeEEEEEEEEEECCCceeEEEeceEEEEEECCEEEeceEeCC-ceecCCCceE
Q 028071           60 KDPKTTINSITVQDVSIALDSARMRVNLNITLDVNVGIKNPNKVSMKLKKGNADIMYRGDTVGVVPIPV-AKISADKTTA  138 (214)
Q Consensus        60 k~P~~~v~~~~v~~~~~~~~~~~~~~~ln~~l~~~v~v~NPN~~~i~y~~~~~~v~Y~g~~lg~~~vp~-f~q~~~~t~~  138 (214)
                      +.|++++.++++..++..          .++|.+.++++|||.+.+.+.+.+.++.-+|..++++..+. +.+++++++.
T Consensus        43 ~~PeV~v~~v~~~~~~l~----------~~~~~l~LrV~NPN~~pLpi~gi~Y~L~vnG~~lasG~s~~~~tIpa~g~~~  112 (174)
T 1yyc_A           43 PTPEATVDDVDFKGVTRD----------GVDYHAKVSVKNPYSQSIPICQISYILKSATRTIASGTIPDPGSLVGSGTTV  112 (174)
T ss_dssp             CCCEEEEEEEEEEEECSS----------SEEEEEEEEEEECSSSCCBCCSEEEEEEESSSCEEEEEESCCCBCCSSEEEE
T ss_pred             CCCEEEEEEeEEeccccc----------eEEEEEEEEEECCCCCCccccceEEEEEECCEEEEEEecCCCceECCCCcEE
Confidence            789999999999876543          35789999999999999999999999999999999999865 8999999999


Q ss_pred             EEEEEEEEeeeecCCcchhccc-cCCcEEeEEEEEEEE
Q 028071          139 LNMTVTILANRFLSNPQLFSDA-TAGSMPMSTMAKVSG  175 (214)
Q Consensus       139 v~~~l~~~~~~l~~~~~l~~d~-~~g~v~l~v~~~~~~  175 (214)
                      +.+++++....+   .++++++ ..+.+++++++++.+
T Consensus       113 v~Vpv~v~~~~l---~~~~~~l~~~~~i~Y~L~g~L~i  147 (174)
T 1yyc_A          113 LDVPVKVAYSIA---VSLMKDMCTDWDIDYQLDIGLTF  147 (174)
T ss_dssp             EEEEEEESHHHH---HHTCCCCCSSEEECEEEEEEEEE
T ss_pred             EEEEEEEEHHHH---HHHHHhcCCCCccceEEEEEEEe
Confidence            999988764323   2334455 345677776665543

>1xo8_A AT1G01470; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG, unknown function; NMR {Arabidopsis thaliana} SCOP: b.1.25.1

Probab=98.65  E-value=4.4e-09  Score=81.62  Aligned_cols=102  Identities=18%  Similarity=0.267  Sum_probs=80.4

Q ss_pred             CCCeEEEEEEEEeeEEeeecCcCcceeEeEEEEEEEEEECCCceeEEEeceEEEEEECCEEEeceEeC-CceecCCCceE
Q 028071           60 KDPKTTINSITVQDVSIALDSARMRVNLNITLDVNVGIKNPNKVSMKLKKGNADIMYRGDTVGVVPIP-VAKISADKTTA  138 (214)
Q Consensus        60 k~P~~~v~~~~v~~~~~~~~~~~~~~~ln~~l~~~v~v~NPN~~~i~y~~~~~~v~Y~g~~lg~~~vp-~f~q~~~~t~~  138 (214)
                      +.|++++.++++.+++..          .++|.+.++++|||.+++.+.+.+.++.-+|+.++++..+ ++.+++++++.
T Consensus        20 ~~P~v~v~~v~~~~~~~~----------~~~~~~~l~V~NPN~~~lpi~gi~y~l~vng~~lasG~~~~~~~ipa~g~~~   89 (151)
T 1xo8_A           20 PKPEGSVTDVDLKDVNRD----------SVEYLAKVSVTNPYSHSIPICEISFTFHSAGREIGKGKIPDPGSLKAKDMTA   89 (151)
T ss_dssp             CSCCCBCSEEEECCCTTT----------EECEEEEEEEECSSSSCCCCEEEEEEEESSSSCEEEEEEEECCCCSSSSEEE
T ss_pred             CCCEEEEEEeEEeccCcc----------eeEEEEEEEEECCCCCCcccccEEEEEEECCEEEEEEecCCCcEECCCCcEE
Confidence            689999999988764432          3478899999999999999999999999999999999886 59999999999


Q ss_pred             EEEEEEEEeeeecCCcchhccc-cCCcEEeEEEEEEE
Q 028071          139 LNMTVTILANRFLSNPQLFSDA-TAGSMPMSTMAKVS  174 (214)
Q Consensus       139 v~~~l~~~~~~l~~~~~l~~d~-~~g~v~l~v~~~~~  174 (214)
                      +.+++++....+   .++.+++ ..+.+++++++++.
T Consensus        90 v~vpv~v~~~~l---~~~~~~l~~~~~i~Y~l~g~l~  123 (151)
T 1xo8_A           90 LDIPVVVPYSIL---FNLARDVGVDWDIDYELQIGLT  123 (151)
T ss_dssp             EEECCCEEHHHH---HHHHHHHHHHSEEEEEEEEEEE
T ss_pred             EEEEEEEEHHHH---HHHHHhcccCCcccEEEEEEEE
Confidence            999987764222   3344444 35678877655554

>3but_A Uncharacterized protein AF_0446; lipid binding protein, beta barrel, protein structure initia PSI-2; 1.91A {Archaeoglobus fulgidus dsm 4304}

Probab=98.33  E-value=3.4e-06  Score=64.12  Aligned_cols=91  Identities=11%  Similarity=0.108  Sum_probs=67.4

Q ss_pred             eEEEEEEEEEECCCceeEEEeceEEEEEECCEEEeceE-eCCceecCCCceEEEEEEEEEeeeecCCcchhccccCCcEE
Q 028071           88 NITLDVNVGIKNPNKVSMKLKKGNADIMYRGDTVGVVP-IPVAKISADKTTALNMTVTILANRFLSNPQLFSDATAGSMP  166 (214)
Q Consensus        88 n~~l~~~v~v~NPN~~~i~y~~~~~~v~Y~g~~lg~~~-vp~f~q~~~~t~~v~~~l~~~~~~l~~~~~l~~d~~~g~v~  166 (214)
                      ...|.+.++++|||.+.+.++..+..++.+|..+|++. ...+.+++++++.+.+++..+..++.  +.+.+.+.+|.- 
T Consensus        17 ~t~~~~~l~V~NPN~~~l~i~gl~y~v~lng~~la~G~s~~~~~I~~~g~~~v~v~~~i~~~~l~--~~~~~hi~nge~-   93 (136)
T 3but_A           17 QTEIVALAKVRNEDVVPIVVSGYHYTIEMNGVKVADGYENSPVTVKPASATTLKFSLRLNNSFLR--EWWVTHIANGEK-   93 (136)
T ss_dssp             EEEEEEEEEEECCSSSCEEEEEEEEEEEETTEEEEEEEECCCEEECTTCEEEEEEEEEEEHHHHT--THHHHHHHTTSE-
T ss_pred             EEEEEEEEEEeCCCCcceeeeceEEEEEECCEEEEeeeecCceEECCCCcEEEEEEEEEchHHhH--HHHHHHhhcCCc-
Confidence            34688999999999999999999999999999999987 57899999999999999888754443  234444444421 


Q ss_pred             eEEEEEEEEEEEEEe
Q 028071          167 MSTMAKVSGKVNIVG  181 (214)
Q Consensus       167 l~v~~~~~~~v~v~g  181 (214)
                      =+++++++.++.+.|
T Consensus        94 s~l~i~~~~~l~v~g  108 (136)
T 3but_A           94 TKIRVAIKPTIEIGG  108 (136)
T ss_dssp             EEEEEEEEEEEECC-
T ss_pred             eEEEEEEEEEEEeCC
Confidence            122344455566444

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	214
d1xo8a_	151	Putative dessication related protein LEA14 {Thale	98.72

>d1xo8a_ b.1.25.1 (A:) Putative dessication related protein LEA14 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: LEA14-like
family: LEA14-like
domain: Putative dessication related protein LEA14
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=98.72  E-value=1.1e-09  Score=83.13  Aligned_cols=111  Identities=18%  Similarity=0.272  Sum_probs=83.6

Q ss_pred             eeCCCeEEEEEEEEeeEEeeecCcCcceeEeEEEEEEEEEECCCceeEEEeceEEEEEECCEEEeceEeC-CceecCCCc
Q 028071           58 KAKDPKTTINSITVQDVSIALDSARMRVNLNITLDVNVGIKNPNKVSMKLKKGNADIMYRGDTVGVVPIP-VAKISADKT  136 (214)
Q Consensus        58 rPk~P~~~v~~~~v~~~~~~~~~~~~~~~ln~~l~~~v~v~NPN~~~i~y~~~~~~v~Y~g~~lg~~~vp-~f~q~~~~t  136 (214)
                      +-+.|++++.++++.+++..          .+++.+.++++|||.+++.....+.+++.+|..++++..+ ++..+++++
T Consensus        18 ~~~kPev~l~~v~i~~v~~~----------~~~l~~~l~V~NPN~~~l~i~~l~y~l~~~g~~ia~G~~~~~~~ipa~~~   87 (151)
T d1xo8a_          18 AIPKPEGSVTDVDLKDVNRD----------SVEYLAKVSVTNPYSHSIPICEISFTFHSAGREIGKGKIPDPGSLKAKDM   87 (151)
T ss_dssp             CCCSCCCBCSEEEECCCTTT----------EECEEEEEEEECSSSSCCCCEEEEEEEESSSSCEEEEEEEECCCCSSSSE
T ss_pred             CCCCCeEEEEEEEeeecccc----------eEEEEEEEEEECCCCCceeeeeEEEEEEECCEEEEeEecCCCcEEcCCCc
Confidence            45689999999999875543          3468899999999999999999999999999999999875 589999999


Q ss_pred             eEEEEEEEEEeeeecCCcchhccc-cCCcEEeEEEEEEEEEEEEEe
Q 028071          137 TALNMTVTILANRFLSNPQLFSDA-TAGSMPMSTMAKVSGKVNIVG  181 (214)
Q Consensus       137 ~~v~~~l~~~~~~l~~~~~l~~d~-~~g~v~l~v~~~~~~~v~v~g  181 (214)
                      +.+.+++++....+   ..+.+|+ .++.+++++++.+....-++|
T Consensus        88 ~~v~vpv~v~~~~l---~~~~~~i~~~~~i~Y~l~g~l~~d~pv~G  130 (151)
T d1xo8a_          88 TALDIPVVVPYSIL---FNLARDVGVDWDIDYELQIGLTIDLPVVG  130 (151)
T ss_dssp             EEEEECCCEEHHHH---HHHHHHHHHHSEEEEEEEEEEEECCTTTS
T ss_pred             EEEEEEEEEEHHHH---HHHHHhhccCCCccEEEEEEEEEecCccC
Confidence            99999987653222   3444554 345677765554443332245