Citrus Sinensis ID: 028097

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210----
Protein Sequence
MECGVGVFTKTAAELERRRENFSKELDFVFADVVMAIIADFMLVWLPAPTISLRPPLAMSTGPIAKFFFNCPDNAFQVAFTGTSYSLIQRIGAIVRNGAKLFAVGTSASLVGVGITNALINARKALDTSFAGEAEDVPIISTSVAYGVYMAVSSNLRYQVLAGVIEQRILEPLLHENKIILAAICFAFRTGNTFLGSLMWVDYARWVGIQKMRE
Secondary Structure (PSIPRED)
ccccHHHHHHHHHHHHHcHHHcHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHccccccc
Secondary Structure Prediction (SSPRO)
ccHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccHHHHHHHHccccHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHcccHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHccccccc
Coil and Loop (DISEMBL)
MECGVGVFTKTAAELERRRENFSKELDFVFADVVMAIIADFMLVwlpaptislrpplamstgpiakfffncpdnafqvAFTGTSYSLIQRIGAIVRNGAKLFAVGTSASLVGVGITNALINARKALdtsfageaedvpiiSTSVAYGVYMAVSSNLRYQVLAGVIEQRILEPLLHENKIILAAICFAFRtgntflgslMWVDYARWVGIQKMRE
Flexible Loop (DISEMBL)
MECGVGVFTKTAAELERRRENFSKELDFVFADVVMAIIADFMLVWLPAPTISLRPPLAMSTGPIAKFFFNCPDNAFQVAFTGTSYSLIQRIGAIVRNGAKLFAVGTSASLVGVGITNALINARKALDTSFAGEAEDVPIISTSVAYGVYMAVSSNLRYQVLAGVIEQRILEPLLHENKIILAAICFAFRTGNTFLGSLMWVDYARWVGIQKMRE
Low Complexity Region (SEG)
MECGVGVFTKTAAELERRRENFSKELDFVFADVVMAIIADFMLVWLPAPTISLRPPLAMSTGPIAKFFFNCPDNAFQVAFTGTSYSLIQRIGAIVRNGAKLFAVGTSASLVGVGITNALINARKALDTSFAGEAEDVPIISTSVAYGVYMAVSSNLRYQVLAGVIEQRILEPLLHENKIILAAICFAFRTGNTFLGSLMWVDYARWVGIQKMRE
Disordered region (IsUnstruct)
****VGVFTKTA*******ENFSKELDFVFADVVMAIIADFMLVWLPAPTISLRPPLAMSTGPIAKFFFNCPDNAFQVAFTGTSYSLIQRIGAIVRNGAKLFAVGTSASLVGVGITNALINARKALDTSFAGEAEDVPIISTSVAYGVYMAVSSNLRYQVLAGVIEQRILEPLLHENKIILAAICFAFRTGNTFLGSLMWVDYARWVGI*****
Disordered Region (DISOPRED)
*ECGVGVFTKTAAELERRRENFSKELDFVFADVVMAIIADFMLVWLPAPT***************KFFFNCPDNAFQVAFTGTSYSLIQRIGAIVRNGAKLFAVGTSASLVGVGITNALINAR**************PIISTSVAYGVYMAVSSNLRYQVLAGVIEQRILEPLLHENKIILAAICFAFRTGNTFLGSLMWVDYARW*GIQ****
Disordered Region (DISEMBL)
MECGVGVFTKTAAELERRRENFSKELDFVFADVVMAIIADFMLVWLPAPTISLRPPLAMSTGPIAKFFFNCPDNAFQVAFTGTSYSLIQRIGAIVRNGAKLFAVGTSASLVGVGITNALINARKALDTSFAGEAEDVPIISTSVAYGVYMAVSSNLRYQVLAGVIEQRILEPLLHENKIILAAICFAFRTGNTFLGSLMWVDYARWVGIQKMRE
Disordered Region (DISPRO)
MECGVGVFTKTAAELERRRENFSKELDFVFADVVMAIIADFMLVWLPAPTISLRPPLAMSTGPIAKFFFNCPDNAFQVAFTGTSYSLIQRIGAIVRNGAKLFAVGTSASLVGVGITNALINARKALDTSFAGEAEDVPIISTSVAYGVYMAVSSNLRYQVLAGVIEQRILEPLLHENKIILAAICFAFRTGNTFLGSLMWVDYARWVGIQ****
Transmembrane Helix (TMHMM)
iiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiii
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
iiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MECGVGVFTKTxxxxxxxxxxxxxxxxxxxxxVVMAIIADFMLVWLPAPTISLRPPLAMSTGPIAKFFFNCPDNAFQVAFTGTSYSLIQRIGAIVRNGAKLFAVGTSASLVGVGITNALINARKALDTSFAGEAEDVPIISTSVAYGVYMAVSSNLRYQVLAGVIEQRILEPLLHENKIILAAICFAFRTGNTFLGSLMWVDYARWVGIQKMRE
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	214
224059600	382	predicted protein [Populus trichocarpa]	1.0	0.560	0.869	1e-109
225450009	380	PREDICTED: uncharacterized protein LOC10	1.0	0.563	0.869	1e-108
297736326	214	unnamed protein product [Vitis vinifera]	1.0	1.0	0.869	1e-108
255553448	388	conserved hypothetical protein [Ricinus	1.0	0.551	0.855	1e-107
356531649	376	PREDICTED: uncharacterized protein LOC10	1.0	0.569	0.841	1e-105
356542804	372	PREDICTED: uncharacterized protein LOC10	1.0	0.575	0.836	1e-105
225435391	384	PREDICTED: uncharacterized protein LOC10	1.0	0.557	0.794	1e-101
297746295	217	unnamed protein product [Vitis vinifera]	1.0	0.986	0.794	1e-101
125552186	297	hypothetical protein OsI_19813 [Oryza sa	0.981	0.707	0.804	1e-100
255544908	392	conserved hypothetical protein [Ricinus	1.0	0.545	0.813	1e-100

>gi|224059600|ref|XP_002299927.1| predicted protein [Populus trichocarpa] gi|222847185|gb|EEE84732.1| predicted protein [Populus trichocarpa]

 Score =  401 bits (1030), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 186/214 (86%), Positives = 205/214 (95%)

Query: 1   MECGVGVFTKTAAELERRRENFSKELDFVFADVVMAIIADFMLVWLPAPTISLRPPLAMS 60
           +ECGVG+FTKTAAELERRRENF+KELDFVFADVVMAIIADFMLVWLPAPT+SLRPPLA+S
Sbjct: 169 IECGVGIFTKTAAELERRRENFTKELDFVFADVVMAIIADFMLVWLPAPTVSLRPPLALS 228

Query: 61  TGPIAKFFFNCPDNAFQVAFTGTSYSLIQRIGAIVRNGAKLFAVGTSASLVGVGITNALI 120
            GP++KFF++CPDNAFQVA  GTSYS +QRIGAI+RNGAKLFAVGT ASLVGVGITNALI
Sbjct: 229 AGPVSKFFYSCPDNAFQVALAGTSYSFLQRIGAILRNGAKLFAVGTGASLVGVGITNALI 288

Query: 121 NARKALDTSFAGEAEDVPIISTSVAYGVYMAVSSNLRYQVLAGVIEQRILEPLLHENKII 180
           NARKALD SFAGEAEDVPI+STSVAYGVYMAVSSNLRYQ+LAGVIEQR+LEP+LH+ K+I
Sbjct: 289 NARKALDKSFAGEAEDVPILSTSVAYGVYMAVSSNLRYQILAGVIEQRLLEPMLHQQKVI 348

Query: 181 LAAICFAFRTGNTFLGSLMWVDYARWVGIQKMRE 214
           L+AICF  RTGNTFLGSLMWVDYARWVGIQK+RE
Sbjct: 349 LSAICFVVRTGNTFLGSLMWVDYARWVGIQKIRE 382

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225450009|ref|XP_002274472.1| PREDICTED: uncharacterized protein LOC100255131 [Vitis vinifera]

 Score =  396 bits (1017), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 186/214 (86%), Positives = 201/214 (93%)

Query: 1   MECGVGVFTKTAAELERRRENFSKELDFVFADVVMAIIADFMLVWLPAPTISLRPPLAMS 60
           MECGVG+FTKTAAELERRRE FSKELDFVFADVVMAIIADFMLVWLPAPT+SL+PPLA+S
Sbjct: 167 MECGVGIFTKTAAELERRREKFSKELDFVFADVVMAIIADFMLVWLPAPTVSLKPPLAVS 226

Query: 61  TGPIAKFFFNCPDNAFQVAFTGTSYSLIQRIGAIVRNGAKLFAVGTSASLVGVGITNALI 120
            G +AKFF+ CPDNAFQVA  GTSYS +QRIGAIVRNGAKLFAVGT ASLVG GITNALI
Sbjct: 227 AGALAKFFYRCPDNAFQVALAGTSYSFLQRIGAIVRNGAKLFAVGTGASLVGTGITNALI 286

Query: 121 NARKALDTSFAGEAEDVPIISTSVAYGVYMAVSSNLRYQVLAGVIEQRILEPLLHENKII 180
           NARKA D SFA EAEDVPIISTSVAYGVYMAVSSNLRYQVLAGVIEQRILEPLLH++K++
Sbjct: 287 NARKAFDKSFAAEAEDVPIISTSVAYGVYMAVSSNLRYQVLAGVIEQRILEPLLHQHKLM 346

Query: 181 LAAICFAFRTGNTFLGSLMWVDYARWVGIQKMRE 214
           L+A+CFA RTGNTFLGSLMWVDYARW+GIQK+RE
Sbjct: 347 LSAVCFAVRTGNTFLGSLMWVDYARWIGIQKIRE 380

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297736326|emb|CBI24964.3| unnamed protein product [Vitis vinifera]

 Score =  394 bits (1013), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 186/214 (86%), Positives = 201/214 (93%)

Query: 1   MECGVGVFTKTAAELERRRENFSKELDFVFADVVMAIIADFMLVWLPAPTISLRPPLAMS 60
           MECGVG+FTKTAAELERRRE FSKELDFVFADVVMAIIADFMLVWLPAPT+SL+PPLA+S
Sbjct: 1   MECGVGIFTKTAAELERRREKFSKELDFVFADVVMAIIADFMLVWLPAPTVSLKPPLAVS 60

Query: 61  TGPIAKFFFNCPDNAFQVAFTGTSYSLIQRIGAIVRNGAKLFAVGTSASLVGVGITNALI 120
            G +AKFF+ CPDNAFQVA  GTSYS +QRIGAIVRNGAKLFAVGT ASLVG GITNALI
Sbjct: 61  AGALAKFFYRCPDNAFQVALAGTSYSFLQRIGAIVRNGAKLFAVGTGASLVGTGITNALI 120

Query: 121 NARKALDTSFAGEAEDVPIISTSVAYGVYMAVSSNLRYQVLAGVIEQRILEPLLHENKII 180
           NARKA D SFA EAEDVPIISTSVAYGVYMAVSSNLRYQVLAGVIEQRILEPLLH++K++
Sbjct: 121 NARKAFDKSFAAEAEDVPIISTSVAYGVYMAVSSNLRYQVLAGVIEQRILEPLLHQHKLM 180

Query: 181 LAAICFAFRTGNTFLGSLMWVDYARWVGIQKMRE 214
           L+A+CFA RTGNTFLGSLMWVDYARW+GIQK+RE
Sbjct: 181 LSAVCFAVRTGNTFLGSLMWVDYARWIGIQKIRE 214

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255553448|ref|XP_002517765.1| conserved hypothetical protein [Ricinus communis] gi|223543037|gb|EEF44572.1| conserved hypothetical protein [Ricinus communis]

 Score =  394 bits (1011), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 183/214 (85%), Positives = 201/214 (93%)

Query: 1   MECGVGVFTKTAAELERRRENFSKELDFVFADVVMAIIADFMLVWLPAPTISLRPPLAMS 60
           +ECGVG+FTKTAAELE+RRE F+KELDFVFADVVMAIIADFMLVWLPAPT+SLRPPLA+S
Sbjct: 175 IECGVGIFTKTAAELEKRREKFTKELDFVFADVVMAIIADFMLVWLPAPTVSLRPPLAVS 234

Query: 61  TGPIAKFFFNCPDNAFQVAFTGTSYSLIQRIGAIVRNGAKLFAVGTSASLVGVGITNALI 120
            G IAKFF+ CPDNAFQVA  GTSYS +QR+GAIVRNG KLFAVGTSASLVGVG+TN LI
Sbjct: 235 AGGIAKFFYTCPDNAFQVALAGTSYSFLQRVGAIVRNGGKLFAVGTSASLVGVGVTNILI 294

Query: 121 NARKALDTSFAGEAEDVPIISTSVAYGVYMAVSSNLRYQVLAGVIEQRILEPLLHENKII 180
           NARK LD SFAGEAEDVPI+STS+ YGVYMAVSSNLRYQ+LAGVIEQRILEPLLH++K+I
Sbjct: 295 NARKILDKSFAGEAEDVPIVSTSIGYGVYMAVSSNLRYQILAGVIEQRILEPLLHQHKVI 354

Query: 181 LAAICFAFRTGNTFLGSLMWVDYARWVGIQKMRE 214
           L+AICFA RTGNTFLGSLMWVDYARWVGIQK+RE
Sbjct: 355 LSAICFAVRTGNTFLGSLMWVDYARWVGIQKIRE 388

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356531649|ref|XP_003534389.1| PREDICTED: uncharacterized protein LOC100808020 [Glycine max]

 Score =  386 bits (992), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 180/214 (84%), Positives = 202/214 (94%)

Query: 1   MECGVGVFTKTAAELERRRENFSKELDFVFADVVMAIIADFMLVWLPAPTISLRPPLAMS 60
           MECGVG+FTKTAAELE+R+ENF+KELDFV ADVVMAI+ADFMLVWLPAPT+SLRPPLA+S
Sbjct: 163 MECGVGIFTKTAAELEKRKENFTKELDFVCADVVMAIVADFMLVWLPAPTVSLRPPLAVS 222

Query: 61  TGPIAKFFFNCPDNAFQVAFTGTSYSLIQRIGAIVRNGAKLFAVGTSASLVGVGITNALI 120
            G IAKFF+ CP+NAFQVA  GTSYSLIQRIGAIVRNGAKLFAVGT ASL+G G+TNALI
Sbjct: 223 AGTIAKFFYGCPENAFQVALAGTSYSLIQRIGAIVRNGAKLFAVGTGASLIGTGVTNALI 282

Query: 121 NARKALDTSFAGEAEDVPIISTSVAYGVYMAVSSNLRYQVLAGVIEQRILEPLLHENKII 180
           NARK +D SFA EAEDVPIISTS+AYGVYMAVSSNLRYQVLAGVIEQRILEPLLH++K++
Sbjct: 283 NARKVVDKSFAAEAEDVPIISTSIAYGVYMAVSSNLRYQVLAGVIEQRILEPLLHQHKLM 342

Query: 181 LAAICFAFRTGNTFLGSLMWVDYARWVGIQKMRE 214
           L+AICFA RTGNTFLGSL+WVDYARWVG+QK+R+
Sbjct: 343 LSAICFAVRTGNTFLGSLLWVDYARWVGVQKIRD 376

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356542804|ref|XP_003539855.1| PREDICTED: uncharacterized protein LOC100818590 [Glycine max]

 Score =  386 bits (992), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 179/214 (83%), Positives = 202/214 (94%)

Query: 1   MECGVGVFTKTAAELERRRENFSKELDFVFADVVMAIIADFMLVWLPAPTISLRPPLAMS 60
           MECGVG+FTKTAAELE+R+ENF+KELDFV ADVVMAI+ADFMLVWLPAPT+SLRPPLA+S
Sbjct: 159 MECGVGIFTKTAAELEKRKENFTKELDFVCADVVMAIVADFMLVWLPAPTVSLRPPLAVS 218

Query: 61  TGPIAKFFFNCPDNAFQVAFTGTSYSLIQRIGAIVRNGAKLFAVGTSASLVGVGITNALI 120
            G IAKFF+ CP+NAFQVA  GTSYSLIQRIGAIVRNGAKLFAVGT ASL+G G+TNALI
Sbjct: 219 AGTIAKFFYGCPENAFQVALAGTSYSLIQRIGAIVRNGAKLFAVGTGASLIGTGVTNALI 278

Query: 121 NARKALDTSFAGEAEDVPIISTSVAYGVYMAVSSNLRYQVLAGVIEQRILEPLLHENKII 180
           NARK +D SFA EAEDVPIISTS+AYGVYMAVSSNLRYQVLAGVIEQRILEPLLH++K++
Sbjct: 279 NARKVVDKSFAAEAEDVPIISTSIAYGVYMAVSSNLRYQVLAGVIEQRILEPLLHQHKLM 338

Query: 181 LAAICFAFRTGNTFLGSLMWVDYARWVGIQKMRE 214
           L+A+CFA RTGNTFLGSL+WVDYARWVG+QK+R+
Sbjct: 339 LSAVCFAVRTGNTFLGSLLWVDYARWVGVQKIRD 372

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225435391|ref|XP_002285363.1| PREDICTED: uncharacterized protein LOC100265633 [Vitis vinifera]

 Score =  372 bits (954), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 170/214 (79%), Positives = 200/214 (93%)

Query: 1   MECGVGVFTKTAAELERRRENFSKELDFVFADVVMAIIADFMLVWLPAPTISLRPPLAMS 60
           MECGVG+FTKTAAE ERRRENF KELDFV ADVVMAIIADFMLVWLPAPT+SLRPPLA+S
Sbjct: 168 MECGVGIFTKTAAEYERRRENFFKELDFVIADVVMAIIADFMLVWLPAPTVSLRPPLAVS 227

Query: 61  TGPIAKFFFNCPDNAFQVAFTGTSYSLIQRIGAIVRNGAKLFAVGTSASLVGVGITNALI 120
            G IAKFF +CP+NAFQVA  GTS+S +QRIGAIVRNG+KLFAVGT++SLVG  +TNA+I
Sbjct: 228 AGAIAKFFHSCPENAFQVALAGTSFSFLQRIGAIVRNGSKLFAVGTTSSLVGTLVTNAII 287

Query: 121 NARKALDTSFAGEAEDVPIISTSVAYGVYMAVSSNLRYQVLAGVIEQRILEPLLHENKII 180
           NARKA+D+S AGE EDVP++STSVAYGVYMA+SSNLRYQV+AGV+EQRILEP+LH++K++
Sbjct: 288 NARKAVDSSSAGEVEDVPVLSTSVAYGVYMAISSNLRYQVVAGVVEQRILEPMLHKHKLL 347

Query: 181 LAAICFAFRTGNTFLGSLMWVDYARWVGIQKMRE 214
           L+A+CFA RTGNTFLGSL+WVDYARWVG+QK++E
Sbjct: 348 LSALCFAVRTGNTFLGSLLWVDYARWVGVQKVQE 381

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297746295|emb|CBI16351.3| unnamed protein product [Vitis vinifera]

 Score =  371 bits (953), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 170/214 (79%), Positives = 200/214 (93%)

Query: 1   MECGVGVFTKTAAELERRRENFSKELDFVFADVVMAIIADFMLVWLPAPTISLRPPLAMS 60
           MECGVG+FTKTAAE ERRRENF KELDFV ADVVMAIIADFMLVWLPAPT+SLRPPLA+S
Sbjct: 1   MECGVGIFTKTAAEYERRRENFFKELDFVIADVVMAIIADFMLVWLPAPTVSLRPPLAVS 60

Query: 61  TGPIAKFFFNCPDNAFQVAFTGTSYSLIQRIGAIVRNGAKLFAVGTSASLVGVGITNALI 120
            G IAKFF +CP+NAFQVA  GTS+S +QRIGAIVRNG+KLFAVGT++SLVG  +TNA+I
Sbjct: 61  AGAIAKFFHSCPENAFQVALAGTSFSFLQRIGAIVRNGSKLFAVGTTSSLVGTLVTNAII 120

Query: 121 NARKALDTSFAGEAEDVPIISTSVAYGVYMAVSSNLRYQVLAGVIEQRILEPLLHENKII 180
           NARKA+D+S AGE EDVP++STSVAYGVYMA+SSNLRYQV+AGV+EQRILEP+LH++K++
Sbjct: 121 NARKAVDSSSAGEVEDVPVLSTSVAYGVYMAISSNLRYQVVAGVVEQRILEPMLHKHKLL 180

Query: 181 LAAICFAFRTGNTFLGSLMWVDYARWVGIQKMRE 214
           L+A+CFA RTGNTFLGSL+WVDYARWVG+QK++E
Sbjct: 181 LSALCFAVRTGNTFLGSLLWVDYARWVGVQKVQE 214

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|125552186|gb|EAY97895.1| hypothetical protein OsI_19813 [Oryza sativa Indica Group]

 Score =  371 bits (952), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 169/210 (80%), Positives = 194/210 (92%)

Query: 1   MECGVGVFTKTAAELERRRENFSKELDFVFADVVMAIIADFMLVWLPAPTISLRPPLAMS 60
           MECGVG+FTKTAAE ERRRENF KELDFV ADVVMAI+ADFMLVWLPAPT+SL+PPLA++
Sbjct: 88  MECGVGIFTKTAAEYERRRENFVKELDFVIADVVMAIVADFMLVWLPAPTVSLQPPLAVN 147

Query: 61  TGPIAKFFFNCPDNAFQVAFTGTSYSLIQRIGAIVRNGAKLFAVGTSASLVGVGITNALI 120
            G IAKFF NCPDNAFQVA  GTSYSL+QR+GAI+RNGAKLFAVGTSASL+G G+TNALI
Sbjct: 148 AGSIAKFFHNCPDNAFQVALAGTSYSLLQRVGAIMRNGAKLFAVGTSASLIGTGVTNALI 207

Query: 121 NARKALDTSFAGEAEDVPIISTSVAYGVYMAVSSNLRYQVLAGVIEQRILEPLLHENKII 180
            ARKA+   F GE+ED+PI+STSVAYGVYMAVSSNLRYQ+LAGVIEQR+LEPLLH +K++
Sbjct: 208 KARKAVSKDFEGESEDIPIVSTSVAYGVYMAVSSNLRYQILAGVIEQRMLEPLLHHHKLV 267

Query: 181 LAAICFAFRTGNTFLGSLMWVDYARWVGIQ 210
           L+A+CFA RTGNTFLGSL+WVDYA+W+GIQ
Sbjct: 268 LSALCFAVRTGNTFLGSLLWVDYAKWIGIQ 297

Source: Oryza sativa Indica Group

Species: Oryza sativa

Genus: Oryza

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255544908|ref|XP_002513515.1| conserved hypothetical protein [Ricinus communis] gi|223547423|gb|EEF48918.1| conserved hypothetical protein [Ricinus communis]

 Score =  370 bits (951), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 174/214 (81%), Positives = 197/214 (92%)

Query: 1   MECGVGVFTKTAAELERRRENFSKELDFVFADVVMAIIADFMLVWLPAPTISLRPPLAMS 60
           +ECGVG+FTKTAAE  RRRENF KEL+ VFADVVMAIIADFMLV+LPAPT+SLRPPLA +
Sbjct: 173 IECGVGIFTKTAAEYNRRRENFFKELEIVFADVVMAIIADFMLVYLPAPTVSLRPPLAGT 232

Query: 61  TGPIAKFFFNCPDNAFQVAFTGTSYSLIQRIGAIVRNGAKLFAVGTSASLVGVGITNALI 120
            GPIAKFF NCPDNAFQVA  GTSYSL+QR+GAIVRNGAKLFAVGT++SLVG  +TNALI
Sbjct: 233 AGPIAKFFHNCPDNAFQVALAGTSYSLLQRLGAIVRNGAKLFAVGTTSSLVGTAVTNALI 292

Query: 121 NARKALDTSFAGEAEDVPIISTSVAYGVYMAVSSNLRYQVLAGVIEQRILEPLLHENKII 180
           NARKA+D S AGE E+VPI+STSVAYGVYMAVSSNLRYQVLAGVIEQRILEPLLH++K++
Sbjct: 293 NARKAVDKSSAGEVENVPIVSTSVAYGVYMAVSSNLRYQVLAGVIEQRILEPLLHQHKLM 352

Query: 181 LAAICFAFRTGNTFLGSLMWVDYARWVGIQKMRE 214
           L+AICFA RTGNT+LGSL+WVDYAR +GIQK +E
Sbjct: 353 LSAICFAVRTGNTYLGSLLWVDYARLIGIQKAQE 386

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	214
TAIR|locus:505006615	386	AT5G12470 "AT5G12470" [Arabido	0.985	0.546	0.767	8.9e-86
TAIR|locus:2078446	745	AT3G56140 "AT3G56140" [Arabido	0.990	0.284	0.363	2.1e-34
TAIR|locus:2063136	735	AT2G40400 [Arabidopsis thalian	0.990	0.288	0.372	3.4e-34
TAIR|locus:2077828	339	AT3G08630 "AT3G08630" [Arabido	0.934	0.589	0.331	5.5e-22
TAIR|locus:2077838	337	AT3G08640 "AT3G08640" [Arabido	0.855	0.543	0.336	7e-22
TAIR|locus:2158155	433	RER1 "AT5G22790" [Arabidopsis	0.906	0.448	0.307	5.1e-21
TAIR|locus:2065649	432	LCD1 "AT2G37860" [Arabidopsis	0.901	0.446	0.302	8.7e-20
TAIR|locus:2176826	521	AT5G24690 "AT5G24690" [Arabido	0.841	0.345	0.245	4.7e-06

TAIR|locus:505006615 AT5G12470 "AT5G12470" [Arabidopsis thaliana (taxid:3702)]

 Score = 858 (307.1 bits), Expect = 8.9e-86, P = 8.9e-86
 Identities = 162/211 (76%), Positives = 189/211 (89%)

Query:     1 MECGVGVFTKTAAELERRRENFSKELDFVFADVVMAIIADFMLVWLPAPTISLRPPLAMS 60
             MECGVG+FTKTAAE ERRRENF  EL+ VFADV MAIIADFMLV+LPAPT+SLRPPLA++
Sbjct:   174 MECGVGIFTKTAAEYERRRENFFNELEVVFADVAMAIIADFMLVYLPAPTVSLRPPLALT 233

Query:    61 TGPIAKFFFNCPDNAFQVAFTGTSYSLIQRIGAIVRNGAKLFAVGTSASLVGVGITNALI 120
              G I+KFF NCPDNAFQVA +GTSY+L+QR+GAI RNGAKLFAVGT++SLVG  ITNA I
Sbjct:   234 AGGISKFFHNCPDNAFQVALSGTSYTLLQRLGAITRNGAKLFAVGTTSSLVGTAITNAFI 293

Query:   121 NARKALDTSFAGEAEDVPIISTSVAYGVYMAVSSNLRYQVLAGVIEQRILEPLLHENKII 180
              ARKA+D +  GE E VPI+STSVAYGVYMAVSSNLRYQ++AGVIEQR+LEP+LH++K+ 
Sbjct:   294 KARKAVDQNSEGEVETVPIVSTSVAYGVYMAVSSNLRYQIVAGVIEQRLLEPMLHQHKLA 353

Query:   181 LAAICFAFRTGNTFLGSLMWVDYARWVGIQK 211
             L+A+CFA RTGNTFLGSL+WVDYAR +GIQK
Sbjct:   354 LSALCFAVRTGNTFLGSLLWVDYARLIGIQK 384

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0009507 "chloroplast" evidence=ISM;IDA

GO:0009706 "chloroplast inner membrane" evidence=IDA

GO:0009941 "chloroplast envelope" evidence=IDA

GO:0005739 "mitochondrion" evidence=IDA

GO:0009536 "plastid" evidence=IDA

TAIR|locus:2078446 AT3G56140 "AT3G56140" [Arabidopsis thaliana (taxid:3702)]

 Score = 381 (139.2 bits), Expect = 2.1e-34, P = 2.1e-34
 Identities = 80/220 (36%), Positives = 127/220 (57%)

Query:     1 MECGVGVFTKTAAELERRRENFSKELDFVFADVVMAIIADFMLVWLPAPTISLRPPLAMS 60
             +E  + + T   A+ E+R+ENF +E+D+V  D V   + DF  VWLPAPT+S       +
Sbjct:   493 IEEAISITTTLIAQYEKRKENFFEEIDYVITDTVRGSVVDFFTVWLPAPTLSFLSYADET 552

Query:    61 TGP-----IAKFFFNCPDNAFQVAFTGTSYSLIQRIGAIVRNGAKLFAVGTSASLVGVGI 115
             TGP     +     + PDNAFQ +  G  ++L  RI +++  G KL  VG  +S   VG 
Sbjct:   553 TGPDSIDALRGLLGSIPDNAFQKSLAGREWNLNLRIASVIVGGLKLAGVGVVSSFAAVGA 612

Query:   116 TNALINARKALDTSF--AGEAEDVPIISTSVAYGVYMAVSSNLRYQVLAGVIEQRILEPL 173
             +NAL  ARK +      A + +  P++ T++ YG ++  S+NLRYQ++AG+IE R+ + L
Sbjct:   613 SNALNIARKVIKPELVVAEKPKRSPLLKTAMVYGGFLGTSANLRYQIIAGLIEHRLSDEL 672

Query:   174 LHENKIILAAICFAFRTGNTFLGSLMWVDYARWVGIQKMR 213
               +  +++ AI F  RT N++ G+  W+D AR  G+Q  +
Sbjct:   673 SSQ-PLLVNAISFVVRTLNSYFGTQQWIDLARSTGLQTQK 711

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0009507 "chloroplast" evidence=ISM;IDA

GO:0009543 "chloroplast thylakoid lumen" evidence=ISS

TAIR|locus:2063136 AT2G40400 [Arabidopsis thaliana (taxid:3702)]

 Score = 379 (138.5 bits), Expect = 3.4e-34, P = 3.4e-34
 Identities = 82/220 (37%), Positives = 125/220 (56%)

Query:     1 MECGVGVFTKTAAELERRRENFSKELDFVFADVVMAIIADFMLVWLPAPTISLRPPLAMS 60
             +E  + + T   A+ E+R+ENF +ELD+V  D V A + DF  VWLPAPT+S       +
Sbjct:   484 IEEAISITTTLVAQYEKRKENFFEELDYVITDSVRASVVDFFTVWLPAPTLSFISYADET 543

Query:    61 TGP-----IAKFFFNCPDNAFQVAFTGTSYSLIQRIGAIVRNGAKLFAVGTSASLVGVGI 115
              GP     +     + PDNAFQ +  G  ++L  RI +++  G KL  VG  +S   VG 
Sbjct:   544 IGPNSIDALRGLLGSIPDNAFQKSLGGQEWTLSLRIASVIIGGLKLAGVGVVSSFAAVGS 603

Query:   116 TNALINARKALDTSFA-GE-AEDVPIISTSVAYGVYMAVSSNLRYQVLAGVIEQRILEPL 173
             +NAL   RK +      GE A+  P++ T++ YG Y+  SSN+RYQ++AG+IE RI + L
Sbjct:   604 SNALYAIRKFIKPELGVGEQAKRSPMLKTALVYGGYLGTSSNIRYQIIAGLIEHRISDEL 663

Query:   174 LHENKIILAAICFAFRTGNTFLGSLMWVDYARWVGIQKMR 213
               +  +++  I F  R  N++ G+  W+D AR  G+Q  +
Sbjct:   664 SSQ-PLLVNMISFVVRVANSYFGTQQWIDLARSTGLQTQK 702

GO:0009507 "chloroplast" evidence=ISM

GO:0009543 "chloroplast thylakoid lumen" evidence=ISS

GO:0015995 "chlorophyll biosynthetic process" evidence=RCA

TAIR|locus:2077828 AT3G08630 "AT3G08630" [Arabidopsis thaliana (taxid:3702)]

 Score = 256 (95.2 bits), Expect = 5.5e-22, P = 5.5e-22
 Identities = 72/217 (33%), Positives = 109/217 (50%)

Query:     1 MECGVGVFTKTAAELERRRENFS-KELDFVFADVVMAIIADFMLVWLPAPTISLRPPLAM 59
             ME  VGV      ++  R  NF   ELDFVF+ +V+  I +F L++L AP+         
Sbjct:   121 MEMLVGVSANVLGDMASR-PNFGLNELDFVFSTLVVGSILNFTLMYLLAPSAISHG---- 175

Query:    60 STGPIAKFFFNCPDNAFQVAFTGTSYSLIQRIGAIVRNGAKLFAVGTSASLVGVGITNAL 119
             S+  +   F +CP +     F   +++L+ R G +V  G     VG +A LVG  I+N L
Sbjct:   176 SSNLLPGIFRSCPSSHM---FEQGNFTLMNRFGTLVYKGMVFATVGLAAGLVGTAISNGL 232

Query:   120 INARKALDTSFAGEAEDVPIISTSVAYGVYMAVSSNLRYQVLAGV--IEQRILEPLLHEN 177
             I  RK +D SF    +  P +  S+ +  +M VS+N+RYQ L G   + ++ L PL+ + 
Sbjct:   233 IMLRKKIDPSFETPNKPPPTLLNSLTWATHMGVSANVRYQTLNGAEFLLEKSLPPLVFKT 292

Query:   178 KIILAAICFAFRTGNTFLGSLMWVDYARWVGIQKMRE 214
              +I      A R  N  LG + +V  AR  G Q + E
Sbjct:   293 SVI------ALRVVNNVLGGMSFVTLARMTGSQSVEE 323

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0009507 "chloroplast" evidence=ISM

GO:0009536 "plastid" evidence=IDA

TAIR|locus:2077838 AT3G08640 "AT3G08640" [Arabidopsis thaliana (taxid:3702)]

 Score = 255 (94.8 bits), Expect = 7.0e-22, P = 7.0e-22
 Identities = 67/199 (33%), Positives = 105/199 (52%)

Query:    19 RENFS-KELDFVFADVVMAIIADFMLVWLPAPTISLRPPLAMSTGPIAKFFFNCPDNAFQ 77
             R NF   ELDFVF+ +V+  I +F+L+++ APT +    L  S+  +   F NCP +   
Sbjct:   141 RPNFGLNELDFVFSTLVVGSILNFVLMYMLAPTAAT---LG-SSQTLPGIFRNCPSSHM- 195

Query:    78 VAFTGTSYSLIQRIGAIVRNGAKLFAVGTSASLVGVGITNALINARKALDTSFAGEAEDV 137
               F   S++++ R G +V  G    +VG +A LVG  I+N LI  RK +D SF    +  
Sbjct:   196 --FEQGSFTVMNRFGTLVYKGMVFASVGLAAGLVGTAISNGLIMLRKKMDPSFETPNKPP 253

Query:   138 PIISTSVAYGVYMAVSSNLRYQVLAGV--IEQRILEPLLHENKIILAAICFAFRTGNTFL 195
             P +  S+ +  +M VS+N RYQ L G+  +  ++L PL+ +  +I+       R  N   
Sbjct:   254 PTVLNSLTWATHMGVSANARYQTLNGIEFLLAKVLPPLVFKTSVIV------LRCANNVA 307

Query:   196 GSLMWVDYARWVGIQKMRE 214
             G + +V  AR  G Q + E
Sbjct:   308 GGMSFVLLARMTGSQSVEE 326

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0009507 "chloroplast" evidence=ISM;IDA

GO:0009941 "chloroplast envelope" evidence=IDA

GO:0009536 "plastid" evidence=IDA

TAIR|locus:2158155 RER1 "AT5G22790" [Arabidopsis thaliana (taxid:3702)]

 Score = 251 (93.4 bits), Expect = 5.1e-21, P = 5.1e-21
 Identities = 64/208 (30%), Positives = 107/208 (51%)

Query:    11 TAAELERRRENFSKELDFVFADVVMAIIADFMLVWLPAPTISLRPPLAMSTGPIAKFFFN 70
             T AE+++R E+F  E +   AD+++ ++ D  LV L AP   +  P   STG        
Sbjct:   232 TFAEVQKRGEDFWSEFELYAADLLVGLVVDVALVGLLAPYARIGKPSVASTGLFKDLKRA 291

Query:    71 C---PDNAFQVAFTGTSYSLIQRIGAIVRNGAKLFAVGTSASLVGVGITNALINARKALD 127
             C   P + F+    G  +S+ QRI      G    +VG    L+G GI N ++ A++++ 
Sbjct:   292 CASLPSSVFEAERPGCKFSVNQRIATFFYKGLLYGSVGFGCGLIGQGIANLIMTAKRSVK 351

Query:   128 TSFAGEAEDVPI---ISTSVAYGVYMAVSSNLRYQVLAGVIEQRILEPLLHENKIILAAI 184
              S     EDVPI     ++  +GV++ +SSN RYQ++ G+  +R++E      +I + A+
Sbjct:   352 KS----EEDVPIPPLFESAALWGVFLGLSSNARYQIINGL--ERVVEGSTAAKRIPVVAM 405

Query:   185 CFAF--RTGNTFLGSLMWVDYARWVGIQ 210
              F    R  N   G + +VD+A+  G+Q
Sbjct:   406 AFTVGVRFANNVYGGMQFVDWAKLSGVQ 433

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0009706 "chloroplast inner membrane" evidence=IDA

GO:0009941 "chloroplast envelope" evidence=IDA

GO:0005739 "mitochondrion" evidence=IDA

GO:0009536 "plastid" evidence=IDA

TAIR|locus:2065649 LCD1 "AT2G37860" [Arabidopsis thaliana (taxid:3702)]

 Score = 240 (89.5 bits), Expect = 8.7e-20, P = 8.7e-20
 Identities = 63/208 (30%), Positives = 109/208 (52%)

Query:    11 TAAELERRRENFSKELDFVFADVVMAIIADFMLVWLPAPTISLRPPLAMSTGPIAK--FF 68
             T AE+++R ++F  E +   AD+++  + +  LV + AP +    P A S G + +  F 
Sbjct:   232 TVAEVQKRGKDFWAEFELYVADLLVGTVVNIALVGMLAPYVRFGQPSA-SPGFLGRMVFA 290

Query:    69 FNC-PDNAFQVAFTGTSYSLIQRIGAIVRNGAKLFAVGTSASLVGVGITNALINARKALD 127
             +N  P + F+    G  +S  QR+      G    AVG    +VG GI N ++ A++ ++
Sbjct:   291 YNALPSSVFEAERPGCRFSAQQRLATYFYKGIMYGAVGFGCGIVGQGIANLIMTAKRNIN 350

Query:   128 TSFAGEAEDVPI---ISTSVAYGVYMAVSSNLRYQVLAGVIEQRILEPLLHENKIILAAI 184
              S     E++P+   I ++  +GV+++VSSN RYQ++ G+  +R++E      K   AA+
Sbjct:   351 KS----EENIPVPPLIKSAALWGVFLSVSSNTRYQIINGL--ERVVEASPFAKKFPPAAM 404

Query:   185 CFAF--RTGNTFLGSLMWVDYARWVGIQ 210
              F    R  N   G + +VD+AR  G Q
Sbjct:   405 AFTVGVRLANNIYGGMQFVDWARLSGCQ 432

GO:0003674 "molecular_function" evidence=ND

GO:0048366 "leaf development" evidence=IMP

GO:0016020 "membrane" evidence=IDA

GO:0009507 "chloroplast" evidence=IDA

GO:0009941 "chloroplast envelope" evidence=IDA

GO:0009536 "plastid" evidence=IDA

TAIR|locus:2176826 AT5G24690 "AT5G24690" [Arabidopsis thaliana (taxid:3702)]

 Score = 130 (50.8 bits), Expect = 4.7e-06, P = 4.7e-06
 Identities = 49/200 (24%), Positives = 89/200 (44%)

Query:    14 ELERRRENFSKELDFVFADVVMAIIADFMLVWLPAPTISLRPPLAMSTGPIAKFFFNCPD 73
             E++ R+    +E D    +V+     +   VWL AP  S           +       P+
Sbjct:   266 EVKNRKNRLKEEWDLALINVLTVSACNAAAVWLLAPCRSYGNTFRFD---LQNTLQKLPN 322

Query:    74 NAFQVAFTGTSYSLIQRIGAIVRNGAKLFAVGTSASLVGVGITNALINARKALDTSFAGE 133
             N F++++    + L +R  ++    A+L  +G +A  +   ++N L   +K         
Sbjct:   323 NLFEMSYPLREFDLQKRFHSLFYKAAELSILGLAAGTLQGSLSNVLAGKKKNR------V 376

Query:   134 AEDVPIISTS-VAYGVYMAVSSNLRYQVLAGVIEQRILEPLLHENKIILAAICF--AFRT 190
             +  VP IST+ + YG ++ + +NLRYQ+L G  E+ +     H + +I  A+ F  A R 
Sbjct:   377 SVTVPSISTNALGYGAFLGIYANLRYQLLCG-FERGVSS---HFD-VIGVALFFGTALRI 431

Query:   191 GNTFLGSLMWVDYARWVGIQ 210
              N  LG         W+G++
Sbjct:   432 MNVQLGEK---SRQVWLGVE 448


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.325   0.138   0.407    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      214       214   0.00085  112 3  11 22  0.43    32
                                                     31  0.49    35


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  8
  No. of states in DFA:  591 (63 KB)
  Total size of DFA:  154 KB (2093 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  18.36u 0.24s 18.60t   Elapsed:  00:00:01
  Total cpu time:  18.37u 0.24s 18.61t   Elapsed:  00:00:01
  Start:  Fri May 10 02:30:08 2013   End:  Fri May 10 02:30:09 2013

GO:0008150 "biological_process" evidence=ND

GO:0009507 "chloroplast" evidence=ISM;IDA

GO:0009706 "chloroplast inner membrane" evidence=IDA

GO:0009941 "chloroplast envelope" evidence=IDA

GO:0005739 "mitochondrion" evidence=IDA

GO:0009536 "plastid" evidence=IDA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: estExt_fgenesh4_pg.C_LG_I1877 hypothetical protein (382 aa) (Populus trichocarpa)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	214
pfam11891	179	pfam11891, DUF3411, Domain of unknown function (DU	9e-69

>gnl|CDD|221294 pfam11891, DUF3411, Domain of unknown function (DUF3411)

 Score =  207 bits (530), Expect = 9e-69
 Identities = 70/164 (42%), Positives = 98/164 (59%)

Query: 1   MECGVGVFTKTAAELERRRENFSKELDFVFADVVMAIIADFMLVWLPAPTISLRPPLAMS 60
           ME  + +   T AE+E+R ENF  E D V AD+++  + +F LV+L APT S     A  
Sbjct: 15  MEEVIDICAATVAEVEKRGENFWAEFDLVAADLLVGSVVNFALVYLLAPTRSFGSTAAEM 74

Query: 61  TGPIAKFFFNCPDNAFQVAFTGTSYSLIQRIGAIVRNGAKLFAVGTSASLVGVGITNALI 120
            G + KF  + P N F+    G SYSL QR G +   GAKL AVG  A LVG  I+NAL+
Sbjct: 75  AGGLRKFLGSLPSNVFEKGLPGRSYSLQQRFGTVFYKGAKLAAVGFIAGLVGQAISNALM 134

Query: 121 NARKALDTSFAGEAEDVPIISTSVAYGVYMAVSSNLRYQVLAGV 164
            ARKA+D +     +  P+  T++ +G ++ VS+NLRYQ+L G+
Sbjct: 135 AARKAVDKNSEESVKVPPLFKTALLWGAFLGVSANLRYQLLNGL 178

This presumed domain is functionally uncharacterized. This domain is found in eukaryotes. This domain is typically between 168 to 186 amino acids in length. This domain has a conserved RYQ sequence motif. Length = 179

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	214
PF11891	180	DUF3411: Domain of unknown function (DUF3411); Int	100.0

>PF11891 DUF3411: Domain of unknown function (DUF3411); InterPro: IPR021825 This presumed domain is functionally uncharacterised

Probab=100.00  E-value=8.1e-72  Score=471.29  Aligned_cols=164  Identities=52%  Similarity=0.795  Sum_probs=160.3

Q ss_pred             CccchhHHHHHHHHHhhcchhhhhHHHHHHHHHHHHHHHHHHHHhhcccccccCCCCcCCcc-hhhhhhhcCCccccccc
Q 028097            1 MECGVGVFTKTAAELERRRENFSKELDFVFADVVMAIIADFMLVWLPAPTISLRPPLAMSTG-PIAKFFFNCPDNAFQVA   79 (214)
Q Consensus         1 ~E~~i~i~~~~~aE~~~R~~~F~~E~D~v~~d~v~~~v~nf~lv~llAPt~s~~~~~~~~~g-~l~~~~~~lP~n~Fq~~   79 (214)
                      |||+||++|+++|||++|||+||+|||||+||+++++|+||+||||||||++++++++...| .++|++++||+|+||++
T Consensus        15 ~E~~i~i~~~~~~e~~~R~e~f~~E~d~v~~d~v~~~i~n~~lv~llAPt~s~~~~~~~~~~~~~~~~~~~~P~n~Fq~~   94 (180)
T PF11891_consen   15 IEEVIGIGCATAAEYAKRGERFWNELDFVFSDVVVGSIVNFALVWLLAPTRSFGSPAASSPGGGLQKFLGSLPNNAFQKG   94 (180)
T ss_pred             HHHHHHHHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHHHHhccchHhhCcccccccchHHHHHHHhChHHHhccC
Confidence            69999999999999999999999999999999999999999999999999999998775544 89999999999999999


Q ss_pred             cCCCCCChhHHHHHHHhhhhhhhhhhhhhhhhHHHHHHHHHHHHHhcCcCcCCCCCCCchhhhhhhhHHHhhhchhhHHH
Q 028097           80 FTGTSYSLIQRIGAIVRNGAKLFAVGTSASLVGVGITNALINARKALDTSFAGEAEDVPIISTSVAYGVYMAVSSNLRYQ  159 (214)
Q Consensus        80 ~~g~~fsl~qR~~~~~~kg~~l~~VG~~ag~vg~~lsn~l~~~Rk~~~~~~~~~~~~~P~l~ta~~~g~fmGvSsNlRYQ  159 (214)
                      +||++||++||++||+|||++|++||++||++|+++||+|+++||++||+||+++++||+++||++||+|||+|||+|||
T Consensus        95 ~~g~~fsl~qR~~~~~~kg~~l~~VG~~ag~vg~~lsn~L~~~rk~~~~~~e~~~~~ppv~~ta~~~g~fmGvSsNlRYQ  174 (180)
T PF11891_consen   95 YPGRSFSLAQRIGAFVYKGAKLAAVGFIAGLVGTGLSNALIAARKKVDPSFEPSVPVPPVLKTALGWGAFMGVSSNLRYQ  174 (180)
T ss_pred             CCCCcccHHHHHHHHHHcchHhhhhHHHHHHHHHHHHHHHHHHHHhcCccccCCCCCCCHHHHHHHHHHHHhhhHhHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHH
Q 028097          160 VLAGV  164 (214)
Q Consensus       160 ~l~G~  164 (214)
                      +|||+
T Consensus       175 il~Gi  179 (180)
T PF11891_consen  175 ILNGI  179 (180)
T ss_pred             HHcCC
Confidence            99998

This domain is found in eukaryotes. This domain is typically between 168 to 186 amino acids in length. This domain has a conserved RYQ sequence motif.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00