Citrus Sinensis ID: 028106

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210---
Protein Sequence
MGSGSTHDHVAYAPLPTENVIVLPVYYQPDLRRWRRRRNLSRCLCTAAAIASLLAVLVFIFYPSDPYLQLARIHLNHIRVNSSPQPTLDLSFSLVVKVHNRDFFSLNYDSLDVSIGYRGRELGSVRSHGGRVRARGSSYVNASLKLNGLEVIHDVIYLIEDLIKGVIPFDTVTMVKGELGVLFFEIPLKAKVSCEVYVNTSNQTIVRQDCYPE
Secondary Structure (PSIPRED)
ccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHEEEEEEcccEEEEEEEEEEEEEEccccccEEEEEEEEEEEEEccccEEEEEcccEEEEEEccEEEEEEEEcccEEEcccEEEEEEEEEEEEEEEcccHHHHHHHHHccEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEccccEEEccccccc
Secondary Structure Prediction (SSPRO)
cccccccccccccccccccEEEcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccEEEEEEEEEEEEEEccccccEEEEEEEEEEEEEccccEEEEEccEEEEEEEcccEEEEEEcccccccccccEEEEEEEEEEcHHHcccHHHHHHHHHcccEcEEEEEEEcEEEEEEEEEEEEEEEEEEEEEEEccccEEEEcccccc
Coil and Loop (DISEMBL)
mgsgsthdhvayaplptenvivlpvyyqpdlrrwrrrrnlsrCLCTAAAIASLLAVLVFIfypsdpylQLARIHLNhirvnsspqptldlSFSLVVKvhnrdffslnydsldvsigyrgrelgsvrshggrvrargssyvnaslklnglEVIHDVIYLIEDLIkgvipfdtvTMVKGELGVLFFEIPLKAKVSCEVYvntsnqtivrqdcype
Flexible Loop (DISEMBL)
mgsgsthdhvayaplptenvivLPVYYQPDLRRWRRRRNLSRCLCTAAAIASLLAVLVFIFYPSDPYLQLARIHLNHIRVNSSPQPTLDLSFSLVVKVHNRDFFSLNYDSLDVSIGYRGRelgsvrshggrvrargssyvnaslklnGLEVIHDVIYLIEDLIKGVIPFDTVTMVKGELGVLFFEIPLKAKVSCEVYvntsnqtivrqdcype
Low Complexity Region (SEG)
MGSGSTHDHVAYAPLPTENVIVLPVYYQPDlrrwrrrrnlsrclctaaaiasllavlVFIFYPSDPYLQLARIHLNHIRVNSSPQPTLDLSFSLVVKVHNRDFFSLNYDSLDVSIGYRGRELGSVRSHGGRVRARGSSYVNASLKLNGLEVIHDVIYLIEDLIKGVIPFDTVTMVKGELGVLFFEIPLKAKVSCEVYVNTSNQTIVRQDCYPE
Disordered region (IsUnstruct)
*********VAYAPLPTENVIVLPVYYQPDLRRWRRRRNLSRCLCTAAAIASLLAVLVFIFYPSDPYLQLARIHLNHIRVNSSPQPTLDLSFSLVVKVHNRDFFSLNYDSLDVSIGYRGRELGSVRSHGGRVRARGSSYVNASLKLNGLEVIHDVIYLIEDLIKGVIPFDTVTMVKGELGVLFFEIPLKAKVSCEVYVNTSNQTIVRQ*****
Disordered Region (DISOPRED)
**************************************NLSRCLCTAAAIASLLAVLVFIFYPSDPYLQLARIHLNHIRVNSSPQPTLDLSFSLVVKVHNRDFFSLNYDSLDVSIGYRGRELGSVRSHGGRVRARGSSYVNASLKLNGLEVIHDVIYLIEDLIKGVIPFDTVTMVKGELGVLFFEIPLKAKVSCEVYVNTSNQTIVRQDC***
Disordered Region (DISEMBL)
********HVAYAPLPTENVIVLPVYYQPDLRRWRRRRNLSRCLCTAAAIASLLAVLVFIFYPSDPYLQLARIHLNHIRVNSSPQPTLDLSFSLVVKVHNRDFFSLNYDSLDVSIGYRGRELGSVRSHGGRVRARGSSYVNASLKLNGLEVIHDVIYLIEDLIKGVIPFDTVTMVKGELGVLFFEIPLKAKVSCEVYVNTSNQTIVRQDCYPE
Disordered Region (DISPRO)
*******DHVAYAPLPTENVIVLPVYYQPDLRRWRRRRNLSRCLCTAAAIASLLAVLVFIFYPSDPYLQLARIHLNHIRVNSSPQPTLDLSFSLVVKVHNRDFFSLNYDSLDVSIGYRGRELGSVRSHGGRVRARGSSYVNASLKLNGLEVIHDVIYLIEDLIKGVIPFDTVTMVKGELGVLFFEIPLKAKVSCEVYVNTSNQTIVRQDC***
Transmembrane Helix (TMHMM)
oooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MGSGSTHDHVAYAPLPTENVIVLPVYYQPDLRRWRRRRNLSRCLCTAAAIASLLAVLVFIFYPSDPYLQLARIHLNHIRVNSSPQPTLDLSFSLVVKVHNRDFFSLNYDSLDVSIGYRGRELGSVRSHGGRVRARGSSYVNASLKLNGLEVIHDVIYLIEDLIKGVIPFDTVTMVKGELGVLFFEIPLKAKVSCEVYVNTSNQTIVRQDCYPE
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	213
255546523	336	conserved hypothetical protein [Ricinus	0.812	0.514	0.706	3e-66
30682408	215	late embryogenesis abundant hydroxyproli	0.962	0.953	0.570	6e-59
297790732	224	hypothetical protein ARALYDRAFT_497058 [	0.962	0.915	0.584	1e-58
110743779	213	hypothetical protein [Arabidopsis thalia	0.920	0.920	0.583	2e-58
224119776	210	predicted protein [Populus trichocarpa]	0.948	0.961	0.590	1e-57
356531257	257	PREDICTED: uncharacterized protein LOC10	0.910	0.754	0.574	5e-57
297738839	218	unnamed protein product [Vitis vinifera]	0.957	0.935	0.553	1e-56
225445268	212	PREDICTED: uncharacterized protein LOC10	0.957	0.962	0.553	1e-56
449461975	215	PREDICTED: uncharacterized protein LOC10	0.971	0.962	0.548	4e-53
356522728	194	PREDICTED: uncharacterized protein LOC10	0.807	0.886	0.594	4e-51

>gi|255546523|ref|XP_002514321.1| conserved hypothetical protein [Ricinus communis] gi|223546777|gb|EEF48275.1| conserved hypothetical protein [Ricinus communis]

 Score =  257 bits (656), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 123/174 (70%), Positives = 145/174 (83%), Gaps = 1/174 (0%)

Query: 40  LSRCLCTAAAIASLLAVLVFIFYPSDPYLQLARIHLNHIRVNSSPQPTLDLSFSLVVKVH 99
           L RCL +A  I   L+  V+  YPSDP LQLARI LNHI VNSSP+ TLDLSFSL+++V 
Sbjct: 63  LRRCLLSAITIL-FLSAAVYFLYPSDPSLQLARIQLNHIHVNSSPKFTLDLSFSLLIRVK 121

Query: 100 NRDFFSLNYDSLDVSIGYRGRELGSVRSHGGRVRARGSSYVNASLKLNGLEVIHDVIYLI 159
           NRDFFSL+YD+LDVS+GYRG+ELG V S GG VR RGSSY++A+L LNGLE++HDV YLI
Sbjct: 122 NRDFFSLDYDTLDVSVGYRGKELGVVSSKGGNVRPRGSSYISAALDLNGLEIVHDVFYLI 181

Query: 160 EDLIKGVIPFDTVTMVKGELGVLFFEIPLKAKVSCEVYVNTSNQTIVRQDCYPE 213
           EDL +GVIPFDT TMV GELG  FF+IP+KAKVSCEVYVNT NQTIVR+DC+P+
Sbjct: 182 EDLARGVIPFDTDTMVNGELGFFFFKIPIKAKVSCEVYVNTVNQTIVREDCHPQ 235

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|30682408|ref|NP_193063.2| late embryogenesis abundant hydroxyproline-rich glycoprotein [Arabidopsis thaliana] gi|62867635|gb|AAY17421.1| At4g13270 [Arabidopsis thaliana] gi|66841356|gb|AAY57315.1| At4g13270 [Arabidopsis thaliana] gi|332657857|gb|AEE83257.1| late embryogenesis abundant hydroxyproline-rich glycoprotein [Arabidopsis thaliana]

 Score =  232 bits (592), Expect = 6e-59,   Method: Compositional matrix adjust.
 Identities = 125/219 (57%), Positives = 158/219 (72%), Gaps = 14/219 (6%)

Query: 1   MGSGSTHDH-VAYAPLPT----ENVIVLPVYYQPDLRRWRR---RRNLSRCLCTAAAIAS 52
           M S    D+ + Y PLP+    ++VI+L  Y     RR RR    RNL RC     A+  
Sbjct: 1   MASSKHEDYGIPYTPLPSSQPSQSVILLTPY-----RRHRRPSLLRNL-RCSLLFTAVIL 54

Query: 53  LLAVLVFIFYPSDPYLQLARIHLNHIRVNSSPQPTLDLSFSLVVKVHNRDFFSLNYDSLD 112
           LL+  V++ YPSDP + ++RI+LNHI V  S +  LDLSFSL +KV NRDFFSL+YDSL 
Sbjct: 55  LLSAAVYLLYPSDPDITVSRINLNHISVVDSHKIALDLSFSLTIKVRNRDFFSLDYDSLV 114

Query: 113 VSIGYRGRELGSVRSHGGRVRARGSSYVNASLKLNGLEVIHDVIYLIEDLIKGVIPFDTV 172
           VSIGYRGRELG V+S GG ++AR SSY++A+L+L+GLEV+HDVIYLI DL KGVIPFDT+
Sbjct: 115 VSIGYRGRELGLVKSKGGHLKARDSSYIDATLELDGLEVVHDVIYLIGDLAKGVIPFDTI 174

Query: 173 TMVKGELGVLFFEIPLKAKVSCEVYVNTSNQTIVRQDCY 211
             V+G+LGVL F IP++ KVSCEVYVN +NQ I  QDC+
Sbjct: 175 AQVQGDLGVLLFNIPIQGKVSCEVYVNVNNQKISHQDCH 213

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297790732|ref|XP_002863251.1| hypothetical protein ARALYDRAFT_497058 [Arabidopsis lyrata subsp. lyrata] gi|297309085|gb|EFH39510.1| hypothetical protein ARALYDRAFT_497058 [Arabidopsis lyrata subsp. lyrata]

 Score =  231 bits (590), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 128/219 (58%), Positives = 157/219 (71%), Gaps = 14/219 (6%)

Query: 1   MGSGSTHDH-VAYAPLPT----ENVIVLPVYYQPDLRRWRRR---RNLSRCLCTAAAIAS 52
           M S    D+ V Y PLP+    + VI+L  Y     RR R     RNL   L   AAI  
Sbjct: 1   MASSKHEDYGVPYTPLPSSQPSQTVILLTPY-----RRNRYPSIFRNLRCSLLFTAAIL- 54

Query: 53  LLAVLVFIFYPSDPYLQLARIHLNHIRVNSSPQPTLDLSFSLVVKVHNRDFFSLNYDSLD 112
           LL+  V++ YPSDP + ++RI+LNHI V  S +  LDLSFSL +KV NRDFFSL+YDSL 
Sbjct: 55  LLSAAVYLLYPSDPDITVSRINLNHISVVDSHKIALDLSFSLTIKVRNRDFFSLDYDSLV 114

Query: 113 VSIGYRGRELGSVRSHGGRVRARGSSYVNASLKLNGLEVIHDVIYLIEDLIKGVIPFDTV 172
           VSIGYRGRELG V+S GG ++AR SSY+NA+L+L+GLEV+HDVIYLI DL KGVIPFDT+
Sbjct: 115 VSIGYRGRELGLVKSKGGHLKARDSSYINATLELDGLEVVHDVIYLIGDLAKGVIPFDTI 174

Query: 173 TMVKGELGVLFFEIPLKAKVSCEVYVNTSNQTIVRQDCY 211
             VKG+LGVL F+IP++ KVSCEVYVN +NQ I  QDC+
Sbjct: 175 AQVKGDLGVLLFQIPIQGKVSCEVYVNVNNQKISHQDCH 213

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|110743779|dbj|BAE99725.1| hypothetical protein [Arabidopsis thaliana]

 Score =  231 bits (589), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 122/209 (58%), Positives = 154/209 (73%), Gaps = 13/209 (6%)

Query: 10  VAYAPLPT----ENVIVLPVYYQPDLRRWRR---RRNLSRCLCTAAAIASLLAVLVFIFY 62
           + Y PLP+    ++VI+L  Y     RR RR    RNL RC     A+  LL+  V++ Y
Sbjct: 9   IPYTPLPSSQPSQSVILLTPY-----RRHRRPSLLRNL-RCSLLFTAVILLLSAAVYLLY 62

Query: 63  PSDPYLQLARIHLNHIRVNSSPQPTLDLSFSLVVKVHNRDFFSLNYDSLDVSIGYRGREL 122
           PSDP + ++RI+LNHI V  S +  LDLSFSL +KV NRDFFSL+YDSL VSIGYRGREL
Sbjct: 63  PSDPDITVSRINLNHISVVDSHKIALDLSFSLTIKVRNRDFFSLDYDSLVVSIGYRGREL 122

Query: 123 GSVRSHGGRVRARGSSYVNASLKLNGLEVIHDVIYLIEDLIKGVIPFDTVTMVKGELGVL 182
           G V+S GG ++AR SSY++A+L+L+GLEV+HDVIYLI DL KGVIPFDT+  V+G+LGVL
Sbjct: 123 GLVKSKGGHLKARDSSYIDATLELDGLEVVHDVIYLIGDLAKGVIPFDTIAQVQGDLGVL 182

Query: 183 FFEIPLKAKVSCEVYVNTSNQTIVRQDCY 211
            F IP++ KVSCEVYVN +NQ I  QDC+
Sbjct: 183 LFNIPIQGKVSCEVYVNVNNQKISHQDCH 211

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224119776|ref|XP_002331158.1| predicted protein [Populus trichocarpa] gi|222873241|gb|EEF10372.1| predicted protein [Populus trichocarpa]

 Score =  228 bits (580), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 127/215 (59%), Positives = 154/215 (71%), Gaps = 13/215 (6%)

Query: 5   STHDHVAYAPLPT------ENVIVLPVYYQPDLRRWRRRRNLSRCLCTAAAIASLLAVLV 58
           S    V Y  LP+      +NVIVL  Y++P     RR      CL    AI  L A   
Sbjct: 3   SKTSSVPYTSLPSHPDSYPQNVIVLSYYHRPPNHILRR------CLLFTTAILLLSAAAY 56

Query: 59  FIFYPSDPYLQLARIHLNHIRVNSSPQPTLDLSFSLVVKVHNRDFFSLNYDSLDVSIGYR 118
            + YPSDP +QL+RI LNHIRVNSSP+ TLD+SFSL +KV NRDFFSL+YDSL VS+GYR
Sbjct: 57  LL-YPSDPAIQLSRIKLNHIRVNSSPELTLDVSFSLTIKVENRDFFSLDYDSLVVSVGYR 115

Query: 119 GRELGSVRSHGGRVRARGSSYVNASLKLNGLEVIHDVIYLIEDLIKGVIPFDTVTMVKGE 178
           GRELG V S GG++RAR SSYV+A L LNGLEVI DV YLI+DL +GVI FDT T VKG+
Sbjct: 116 GRELGFVNSKGGKIRARRSSYVDARLDLNGLEVIKDVFYLIQDLARGVIIFDTDTQVKGD 175

Query: 179 LGVLFFEIPLKAKVSCEVYVNTSNQTIVRQDCYPE 213
           LG+L F+IP+  +VSC+V+VNT+NQT+  QDCYP+
Sbjct: 176 LGLLLFKIPINGRVSCQVFVNTNNQTVEHQDCYPQ 210

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356531257|ref|XP_003534194.1| PREDICTED: uncharacterized protein LOC100793858 [Glycine max]

 Score =  226 bits (576), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 116/202 (57%), Positives = 148/202 (73%), Gaps = 8/202 (3%)

Query: 14  PLPTENVIVLPVYYQPDLRRWRRRRNLSRCLCTAAAIASLLAVL--VFIFYPSDPYLQLA 71
           P P   V++LP Y      R   +R   RC+  +AA+   L V    F+ YPSDP ++LA
Sbjct: 45  PYPQNVVVLLPSY------RPHFQRRRRRCIIYSAALFLFLLVAGAAFLLYPSDPEIRLA 98

Query: 72  RIHLNHIRVNSSPQPTLDLSFSLVVKVHNRDFFSLNYDSLDVSIGYRGRELGSVRSHGGR 131
           RI L+ I + ++P+P LDLSFSL VKV NRDFFSL+YDSL VS+GYRGR+LG V + GG 
Sbjct: 99  RIRLDRIGIRTNPRPILDLSFSLTVKVRNRDFFSLSYDSLTVSVGYRGRQLGFVTAGGGS 158

Query: 132 VRARGSSYVNASLKLNGLEVIHDVIYLIEDLIKGVIPFDTVTMVKGELGVLFFEIPLKAK 191
           +RARGSSYV+A+L ++G EVI+D  YL+ED+ KGVIPFDT T V+G+LG+ FF +PLKA 
Sbjct: 159 IRARGSSYVDATLTIDGFEVIYDAFYLLEDIAKGVIPFDTDTRVEGKLGLFFFTVPLKAT 218

Query: 192 VSCEVYVNTSNQTIVRQDCYPE 213
           VSCEV VN + QTIVRQDCYP+
Sbjct: 219 VSCEVDVNINQQTIVRQDCYPK 240

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297738839|emb|CBI28084.3| unnamed protein product [Vitis vinifera]

 Score =  225 bits (573), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 118/213 (55%), Positives = 156/213 (73%), Gaps = 9/213 (4%)

Query: 5   STHDHVAYAPLPT----ENVIVL-PVYYQPDLRRWRRRRNLSRCLCTAAAIASLLAVLVF 59
           ++HD++ YAP+      +NV+VL PVYY    R   R  N       A A+   ++  V+
Sbjct: 3   TSHDNLVYAPIGGDPNYQNVVVLLPVYYPRRRRLLYRLCNA----FLACAVFLSISAAVY 58

Query: 60  IFYPSDPYLQLARIHLNHIRVNSSPQPTLDLSFSLVVKVHNRDFFSLNYDSLDVSIGYRG 119
           + YPSDP +Q+  +HLN ++V++SP  +LDLS  L ++V NRDFFS +Y SL  S+GYRG
Sbjct: 59  LLYPSDPTVQVVGLHLNSVQVHTSPVISLDLSLDLTIRVRNRDFFSFSYTSLTASVGYRG 118

Query: 120 RELGSVRSHGGRVRARGSSYVNASLKLNGLEVIHDVIYLIEDLIKGVIPFDTVTMVKGEL 179
           R LG V S GG +RARGSSY+NA+L L+G+EV+HDV YL+EDL +G IPFDTV+ V+G+L
Sbjct: 119 RRLGFVNSSGGYLRARGSSYINATLDLDGIEVLHDVFYLLEDLARGSIPFDTVSEVRGKL 178

Query: 180 GVLFFEIPLKAKVSCEVYVNTSNQTIVRQDCYP 212
           G+ FFEIPLKA+VSCEVYVNTSNQTI+ QDCYP
Sbjct: 179 GLFFFEIPLKARVSCEVYVNTSNQTIIHQDCYP 211

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225445268|ref|XP_002284574.1| PREDICTED: uncharacterized protein LOC100254347 [Vitis vinifera]

 Score =  225 bits (573), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 118/213 (55%), Positives = 156/213 (73%), Gaps = 9/213 (4%)

Query: 5   STHDHVAYAPLPT----ENVIVL-PVYYQPDLRRWRRRRNLSRCLCTAAAIASLLAVLVF 59
           ++HD++ YAP+      +NV+VL PVYY    R   R  N       A A+   ++  V+
Sbjct: 3   TSHDNLVYAPIGGDPNYQNVVVLLPVYYPRRRRLLYRLCNA----FLACAVFLSISAAVY 58

Query: 60  IFYPSDPYLQLARIHLNHIRVNSSPQPTLDLSFSLVVKVHNRDFFSLNYDSLDVSIGYRG 119
           + YPSDP +Q+  +HLN ++V++SP  +LDLS  L ++V NRDFFS +Y SL  S+GYRG
Sbjct: 59  LLYPSDPTVQVVGLHLNSVQVHTSPVISLDLSLDLTIRVRNRDFFSFSYTSLTASVGYRG 118

Query: 120 RELGSVRSHGGRVRARGSSYVNASLKLNGLEVIHDVIYLIEDLIKGVIPFDTVTMVKGEL 179
           R LG V S GG +RARGSSY+NA+L L+G+EV+HDV YL+EDL +G IPFDTV+ V+G+L
Sbjct: 119 RRLGFVNSSGGYLRARGSSYINATLDLDGIEVLHDVFYLLEDLARGSIPFDTVSEVRGKL 178

Query: 180 GVLFFEIPLKAKVSCEVYVNTSNQTIVRQDCYP 212
           G+ FFEIPLKA+VSCEVYVNTSNQTI+ QDCYP
Sbjct: 179 GLFFFEIPLKARVSCEVYVNTSNQTIIHQDCYP 211

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449461975|ref|XP_004148717.1| PREDICTED: uncharacterized protein LOC101219269 [Cucumis sativus] gi|449501291|ref|XP_004161330.1| PREDICTED: uncharacterized protein LOC101225993 [Cucumis sativus]

 Score =  213 bits (542), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 118/215 (54%), Positives = 151/215 (70%), Gaps = 8/215 (3%)

Query: 3   SGSTHDHVAYAPLPT----ENVIVLPVYYQPDLRRWRRRRNLSRCLCTAAAIASLLAVLV 58
           SG     V Y  +P+    +NV+VL +Y  P  R     R L R     +A   LL  + 
Sbjct: 5   SGDDSVPVPYTLIPSNAAQQNVVVLSLYRPPPCRH----RRLLRLCAFYSAAFLLLFAVA 60

Query: 59  FIFYPSDPYLQLARIHLNHIRVNSSPQPTLDLSFSLVVKVHNRDFFSLNYDSLDVSIGYR 118
           F+ +PSDP LQL R+ LN ++V+  P  +LDLSFS+ ++V N++FFSLNY+ L VS+GYR
Sbjct: 61  FLLFPSDPSLQLVRLKLNRVKVHLVPVVSLDLSFSVSLRVRNKNFFSLNYNFLGVSVGYR 120

Query: 119 GRELGSVRSHGGRVRARGSSYVNASLKLNGLEVIHDVIYLIEDLIKGVIPFDTVTMVKGE 178
           GR LG V S GGRV ARGSSYVNA+L LNGLEV+HDV+YL+ DL KG+IPFDT T V+G 
Sbjct: 121 GRRLGYVSSEGGRVSARGSSYVNATLDLNGLEVVHDVLYLLADLGKGIIPFDTETDVEGS 180

Query: 179 LGVLFFEIPLKAKVSCEVYVNTSNQTIVRQDCYPE 213
           +G+ F +IP+KA+VSCEV VNT+NQTI  QDCYPE
Sbjct: 181 MGLFFIKIPIKARVSCEVLVNTNNQTIEHQDCYPE 215

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356522728|ref|XP_003529998.1| PREDICTED: uncharacterized protein LOC100775891, partial [Glycine max]

 Score =  206 bits (525), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 104/175 (59%), Positives = 132/175 (75%), Gaps = 3/175 (1%)

Query: 42  RCLCTAAAIAS--LLAVLVFIFYPSDPYLQLARIHLNHIRVNSSPQPTLDLSFSLVVKVH 99
           RC+  +AA+    L+A   F+ YPSDP ++L RI LN I + ++P+P LDLSFS+ VKVH
Sbjct: 3   RCILYSAALFLFLLIAGAAFLLYPSDPEIRLTRIRLNRIGIRTNPRPILDLSFSITVKVH 62

Query: 100 NRDFFSLNYDSLDVSIGYRGRELGSVRSHGGRVRARG-SSYVNASLKLNGLEVIHDVIYL 158
           NRDFFSL YD+L VS+GYRGR+LG V   GG       SSYV+A+L ++G EVI+D  YL
Sbjct: 63  NRDFFSLTYDTLAVSVGYRGRQLGFVTGGGGGRIRARGSSYVDATLTIDGFEVIYDAFYL 122

Query: 159 IEDLIKGVIPFDTVTMVKGELGVLFFEIPLKAKVSCEVYVNTSNQTIVRQDCYPE 213
           +ED+ KGVIPFDT T V+G+LG+ FF +PLKA VSCEVYVN + QTIVRQDCYP+
Sbjct: 123 LEDIAKGVIPFDTDTRVEGKLGLFFFTVPLKATVSCEVYVNINQQTIVRQDCYPK 177

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	213
TAIR|locus:2142040	215	AT4G13270 "AT4G13270" [Arabido	0.976	0.967	0.523	2.7e-52
TAIR|locus:2018154	227	AT1G52330 "AT1G52330" [Arabido	0.629	0.590	0.477	6e-32
TAIR|locus:2080320	235	AT3G54200 "AT3G54200" [Arabido	0.704	0.638	0.245	1.9e-12
TAIR|locus:2100177	186	AT3G44380 "AT3G44380" [Arabido	0.676	0.774	0.244	8.7e-08
TAIR|locus:504955821	189	AT3G05975 "AT3G05975" [Arabido	0.708	0.798	0.220	1.9e-05

TAIR|locus:2142040 AT4G13270 "AT4G13270" [Arabidopsis thaliana (taxid:3702)]

 Score = 542 (195.9 bits), Expect = 2.7e-52, P = 2.7e-52
 Identities = 113/216 (52%), Positives = 145/216 (67%)

Query:     1 MGSGSTHDH-VAYAPLPT----ENVIVLPVYYQPDXXXXXXXXXXXXXXXXXXXXXXXXX 55
             M S    D+ + Y PLP+    ++VI+L  Y +                           
Sbjct:     1 MASSKHEDYGIPYTPLPSSQPSQSVILLTPYRR---HRRPSLLRNLRCSLLFTAVILLLS 57

Query:    56 XXVFIFYPSDPYLQLARIHLNHIRVNSSPQPTLDLSFSLVVKVHNRDFFSLNYDSLDVSI 115
               V++ YPSDP + ++RI+LNHI V  S +  LDLSFSL +KV NRDFFSL+YDSL VSI
Sbjct:    58 AAVYLLYPSDPDITVSRINLNHISVVDSHKIALDLSFSLTIKVRNRDFFSLDYDSLVVSI 117

Query:   116 GYRGRELGSVRSHGGRVRARGSSYVNASLKLNGLEVIHDVIYLIEDLIKGVIPFDTVTMV 175
             GYRGRELG V+S GG ++AR SSY++A+L+L+GLEV+HDVIYLI DL KGVIPFDT+  V
Sbjct:   118 GYRGRELGLVKSKGGHLKARDSSYIDATLELDGLEVVHDVIYLIGDLAKGVIPFDTIAQV 177

Query:   176 KGELGVLFFEIPLKAKVSCEVYVNTSNQTIVRQDCY 211
             +G+LGVL F IP++ KVSCEVYVN +NQ I  QDC+
Sbjct:   178 QGDLGVLLFNIPIQGKVSCEVYVNVNNQKISHQDCH 213

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0000902 "cell morphogenesis" evidence=RCA

GO:0016049 "cell growth" evidence=RCA

GO:0048193 "Golgi vesicle transport" evidence=RCA

TAIR|locus:2018154 AT1G52330 "AT1G52330" [Arabidopsis thaliana (taxid:3702)]

 Score = 350 (128.3 bits), Expect = 6.0e-32, P = 6.0e-32
 Identities = 64/134 (47%), Positives = 95/134 (70%)

Query:    58 VFIFYPSDPYLQLARIHLNHIRVNSSPQPTLDLSFSLVVKVHNRDFFSLNYDSLDVSIGY 117
             ++IF+PSDP +++ R+ ++H+ V+  P P++D++  + +KV N D +S ++  LDV+I Y
Sbjct:    59 IYIFWPSDPRIKIIRVKISHVHVHRRPVPSIDMTLLVTLKVSNADVYSFDFTDLDVTIDY 118

Query:   118 RGRELGSVRSHGGRVRARGSSYVNASLKLNGLEVIHDVIYLIEDLIKGVIPFDTVTMVKG 177
             RG+ LG V S GG V A GSSY++A  +L+G+ V  DVI+LI DL KG + FDTVT   G
Sbjct:   119 RGKTLGHVSSDGGHVTAFGSSYLDAEAELDGVMVFPDVIHLIHDLAKGSVEFDTVTETNG 178

Query:   178 ELGVLFFEIPLKAK 191
             +LGVLFF  PLK +
Sbjct:   179 KLGVLFFRFPLKVR 192

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2080320 AT3G54200 "AT3G54200" [Arabidopsis thaliana (taxid:3702)]

 Score = 166 (63.5 bits), Expect = 1.9e-12, P = 1.9e-12
 Identities = 38/155 (24%), Positives = 83/155 (53%)

Query:    60 IFYPSDPYLQLARIHLNHIRVNSSP---QPTLDLSFSLVVKVHNRDFFSLNYDSLDVSIG 116
             +F P  P   +  + ++ ++ + +P   +  L+L+ ++ + + N +    +YDS    + 
Sbjct:    76 LFKPKRPTTTIDSVTVDRLQASVNPLLLKVLLNLTLNVDLSLKNPNRIGFSYDSSSALLN 135

Query:   117 YRGRELGSVRSHGGRVRARGSSYVNASLKLNGLEVIHDVIYLIEDLIKGVIPFDTVTMVK 176
             YRG+ +G       R+ AR +  +N +L L    ++ +   L+ D++ GVIP +T   V 
Sbjct:   136 YRGQVIGEAPLPANRIAARKTVPLNITLTLMADRLLSET-QLLSDVMAGVIPLNTFVKVT 194

Query:   177 GELGVL-FFEIPLKAKVSCEVYVNTSNQTIVRQDC 210
             G++ VL  F+I +++  SC++ ++ S++ +  Q C
Sbjct:   195 GKVTVLKIFKIKVQSSSSCDLSISVSDRNVTSQHC 229

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0046658 "anchored to plasma membrane" evidence=IDA

GO:0005886 "plasma membrane" evidence=IDA

GO:0009506 "plasmodesma" evidence=IDA

TAIR|locus:2100177 AT3G44380 "AT3G44380" [Arabidopsis thaliana (taxid:3702)]

 Score = 128 (50.1 bits), Expect = 8.7e-08, P = 8.7e-08
 Identities = 36/147 (24%), Positives = 63/147 (42%)

Query:    63 PSDPYLQLARIHLNHIRVNSSPQPTLDLSFSLVVKVHNRDFFSLNYDSLDVSIGYRGREL 122
             P DP   L  I L  +++N    P LD    L V V N +  +++Y S  ++I Y G  L
Sbjct:    33 PKDPTFHLISIDLTSLKLNL---PVLDAELMLTVHVTNPNIAAIHYSSTKMTILYDGTVL 89

Query:   123 GSVRSHGGRVRARGSSYVNASLKLNGLEVIHDVIYLIEDLIKGVIPFDTVTMVKGELGVL 182
             GS     G   AR    +    +L+G+E+         D+    +  +    ++G   VL
Sbjct:    90 GSAEVKAGSQPARSCQLLRLPARLDGMELAQHARQFFSDVANREMKLEAKLTIEGAAKVL 149

Query:   183 FFEIPLKAKVSCEVYVNTSNQTIVRQD 209
             +++   +  V   V V+     ++ Q+
Sbjct:   150 WWDHSFRVHVDSFVTVDPVFLDVIGQE 176

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0009269 "response to desiccation" evidence=IEA

TAIR|locus:504955821 AT3G05975 "AT3G05975" [Arabidopsis thaliana (taxid:3702)]

 Score = 114 (45.2 bits), Expect = 1.9e-05, P = 1.9e-05
 Identities = 34/154 (22%), Positives = 74/154 (48%)

Query:    60 IFYPSDPYLQLARIHLNHIRVNSSPQPTLDLSFSLVVKV--HNRDFFSLNYDSLDVSIGY 117
             +F P  P LQ     ++ I  N S    + L+F+L +++   N +     Y +++  + Y
Sbjct:    30 VFKPKHPILQTVSSTVDGISTNISLPYEVQLNFTLTLEMLLKNPNVADFEYKTVENLVYY 89

Query:   118 RGRELGSVRSHGGRVRARGSSYVNASLKLNGLEVIHDVIYLIEDLIKGVIPFDTVTMVKG 177
             R   +G++      + A+GS  +   L L   + + ++  +++D++ G I  +T   + G
Sbjct:    90 RDTLVGNLTLPSSTLPAKGSVLLPCPLFLQLDKFVANLGDIVQDVLHGKIVMETRAKMPG 149

Query:   178 ELGVL-FFEIPLKAKVSCEVYVNTSNQTIVRQDC 210
             ++ +L  F+IPL +   C + +   +  +  Q C
Sbjct:   150 KITLLGIFKIPLDSISHCNLVLGFPSMVVEDQVC 183


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.322   0.140   0.414    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      213       186   0.00083  110 3  11 22  0.42    32
                                                     31  0.41    35


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  5
  No. of states in DFA:  563 (60 KB)
  Total size of DFA:  148 KB (2091 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  15.95u 0.12s 16.07t   Elapsed:  00:00:01
  Total cpu time:  15.95u 0.12s 16.07t   Elapsed:  00:00:01
  Start:  Mon May 20 15:14:29 2013   End:  Mon May 20 15:14:30 2013

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=ISM

GO:0008150 "biological_process" evidence=ND

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input:
	AT4G13270	unknown protein; unknown protein; FUNCTIONS IN- molecular_function unknown; INVOLVED IN- biological_process unknown; LOCATED IN- chloroplast; EXPRESSED IN- 23 plant structures; EXPRESSED DURING- 13 growth stages; BEST Arabidopsis thaliana protein match is- unknown protein (TAIR-AT1G52330.1); Has 109 Blast hits to 109 proteins in 10 species- Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 109; Viruses - 0; Other Eukaryotes - 0 (source- NCBI BLink). (215 aa)
		(Arabidopsis thaliana)
Predicted Functional Partners:
	AT4G01960	unknown protein; unknown protein; FUNCTIONS IN- molecular_function unknown; INVOLVED IN- biolog [...] (236 aa)				•					0.414

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	213
PLN03160	219	PLN03160, PLN03160, uncharacterized protein; Provi	2e-15
pfam03168	98	pfam03168, LEA_2, Late embryogenesis abundant prot	2e-07

>gnl|CDD|215609 PLN03160, PLN03160, uncharacterized protein; Provisional

 Score = 71.7 bits (176), Expect = 2e-15
 Identities = 46/191 (24%), Positives = 95/191 (49%), Gaps = 8/191 (4%)

Query: 29  PDLRRWRRRRNLSRCLCTAAAI---ASLLAVLVF-IFYPSDPYLQLARIHLNHIRVNSSP 84
             L++ RRR  +  C C  A +   A+ + VLVF +F   DP +++  + +  + + ++ 
Sbjct: 26  NHLKKTRRRNCIKCCGCITATLLILATTILVLVFTVFRVKDPVIKMNGVTVTKLELINNT 85

Query: 85  QPTLDLSFSLV--VKVHNRDFFSLNYDSLDVSIGYRGRELGSVRSHGGRVRARGSSYVNA 142
                 + +L+  V V N +  S  Y +   +I Y G  +G  R+  G+ +AR +  +N 
Sbjct: 86  TLRPGTNITLIADVSVKNPNVASFKYSNTTTTIYYGGTVVGEARTPPGKAKARRTMRMNV 145

Query: 143 SLKLNGLEVIHDVIYLIEDLIKGVIPFDTVTMVKGELGVL-FFEIPLKAKVSCEVYVNTS 201
           ++ +   + I  V  L+ D+  G++  ++ T + G++ +L   +  +  K++C + VN +
Sbjct: 146 TVDII-PDKILSVPGLLTDISSGLLNMNSYTRIGGKVKILKIIKKHVVVKMNCTMTVNIT 204

Query: 202 NQTIVRQDCYP 212
           +Q I  Q C  
Sbjct: 205 SQAIQGQKCKR 215

Length = 219

>gnl|CDD|217400 pfam03168, LEA_2, Late embryogenesis abundant protein

 Score = 47.4 bits (113), Expect = 2e-07
 Identities = 20/97 (20%), Positives = 40/97 (41%), Gaps = 2/97 (2%)

Query: 96  VKVHNRDFFSLNYDSLDVSIGYRGRELGS-VRSHGGRVRARGSSYVNASLKLNGLEVIHD 154
           ++V N + F L YD L   + Y G+EL S      G V A G++ +   + ++  ++   
Sbjct: 2   LRVRNPNSFPLPYDGLSYDLSYNGQELASGTSPQPGTVPAGGTTTLEVPVTVSLDDLARL 61

Query: 155 VIYLIEDLIKGVIPFDTVTMVKGELGVLFFEIPLKAK 191
           +  L+   ++         +  G        +PL  +
Sbjct: 62  LKDLLAVGLELPYTLR-GRLKVGGPVKGSRTVPLSKE 97

Different types of LEA proteins are expressed at different stages of late embryogenesis in higher plant seed embryos and under conditions of dehydration stress. The function of these proteins is unknown. This family represents a group of LEA proteins that appear to be distinct from those in pfam02987. The family DUF1511, pfam07427, has now been merged into this family. Length = 98

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	213
PLN03160	219	uncharacterized protein; Provisional	100.0
PF03168	101	LEA_2: Late embryogenesis abundant protein; InterP	99.53
PF07092	238	DUF1356: Protein of unknown function (DUF1356); In	99.51
smart00769	100	WHy Water Stress and Hypersensitive response.	99.04
COG5608	161	LEA14-like dessication related protein [Defense me	98.35
PF12751	387	Vac7: Vacuolar segregation subunit 7; InterPro: IP	97.58
PLN03160	219	uncharacterized protein; Provisional	90.46
PF11837	106	DUF3357: Domain of unknown function (DUF3357); Int	90.18
PRK05529	255	cell division protein FtsQ; Provisional	81.17
PF14155	112	DUF4307: Domain of unknown function (DUF4307)	81.05
PF11906	149	DUF3426: Protein of unknown function (DUF3426); In	80.39

>PLN03160 uncharacterized protein; Provisional

Probab=100.00  E-value=2e-40  Score=276.51  Aligned_cols=159  Identities=21%  Similarity=0.421  Sum_probs=146.2

Q ss_pred             HhheeeEEecCCCeEEEEEEEEcceeecCC--CCceeeEEEEEEEEEEcCCceEEEEcceEEEEEECCEEEeeeEeCCCc
Q 028106           54 LAVLVFIFYPSDPYLQLARIHLNHIRVNSS--PQPTLDLSFSLVVKVHNRDFFSLNYDSLDVSIGYRGRELGSVRSHGGR  131 (213)
Q Consensus        54 l~~~~~v~~P~~P~~~V~~~~l~~f~~~~~--p~~~l~~~l~~~v~v~NPN~~~i~y~~~~~~v~Y~g~~lg~~~~p~f~  131 (213)
                      ++++|++||||+|+|+|+++++++|+++..  +...+|++++++++++|||+++|+|+++++.++|+|+.+|++.+|+|+
T Consensus        55 ~~l~~~vfrPk~P~~~v~~v~l~~~~~~~~~~~~~~~n~tl~~~v~v~NPN~~~~~Y~~~~~~v~Y~g~~vG~a~~p~g~  134 (219)
T PLN03160         55 LVLVFTVFRVKDPVIKMNGVTVTKLELINNTTLRPGTNITLIADVSVKNPNVASFKYSNTTTTIYYGGTVVGEARTPPGK  134 (219)
T ss_pred             HheeeEEEEccCCeEEEEEEEEeeeeeccCCCCceeEEEEEEEEEEEECCCceeEEEcCeEEEEEECCEEEEEEEcCCcc
Confidence            346899999999999999999999998652  246789999999999999999999999999999999999999999999


Q ss_pred             cCCCCeEEEEEEEEEcceeeccchHHHHhhhhcCeEeEEEEEEEEEEEEEE-EEeeceEEEEEEEEEEeCCcceeecCcC
Q 028106          132 VRARGSSYVNASLKLNGLEVIHDVIYLIEDLIKGVIPFDTVTMVKGELGVL-FFEIPLKAKVSCEVYVNTSNQTIVRQDC  210 (213)
Q Consensus       132 ~~~r~tt~v~~~v~~~~~~l~~~~~~l~~D~~~G~v~l~~~~~v~grv~v~-~~~~~~~~~v~C~v~v~~~~~~i~~~~C  210 (213)
                      |++++++.+++++.+.+.++.++ .+|.+|+++|.++|+++++++||++++ +++++++++++|++.|+..++++++++|
T Consensus       135 ~~ar~T~~l~~tv~~~~~~~~~~-~~L~~D~~~G~v~l~~~~~v~gkVkv~~i~k~~v~~~v~C~v~V~~~~~~i~~~~C  213 (219)
T PLN03160        135 AKARRTMRMNVTVDIIPDKILSV-PGLLTDISSGLLNMNSYTRIGGKVKILKIIKKHVVVKMNCTMTVNITSQAIQGQKC  213 (219)
T ss_pred             cCCCCeEEEEEEEEEEeceeccc-hhHHHHhhCCeEEEEEEEEEEEEEEEEEEEEEEEEEEEEeEEEEECCCCEEeccEe
Confidence            99999999999998888776654 579999999999999999999999999 6688999999999999999999999999


Q ss_pred             ccC
Q 028106          211 YPE  213 (213)
Q Consensus       211 ~~~  213 (213)
                      +.+
T Consensus       214 ~~~  216 (219)
T PLN03160        214 KRH  216 (219)
T ss_pred             ccc
Confidence            875

>PF03168 LEA_2: Late embryogenesis abundant protein; InterPro: IPR004864 Different types of LEA proteins are expressed at different stages of late embryogenesis in higher plant seed embryos and under conditions of dehydration stress [, ]

Probab=99.53  E-value=7.3e-14  Score=101.73  Aligned_cols=97  Identities=26%  Similarity=0.405  Sum_probs=75.5

Q ss_pred             EEEEEcCCceEEEEcceEEEEEECCEEEe-eeEeCCCccCCCCeEEEEEEEEEcceeeccchHHHHhhhhcCeEeEEEEE
Q 028106           95 VVKVHNRDFFSLNYDSLDVSIGYRGRELG-SVRSHGGRVRARGSSYVNASLKLNGLEVIHDVIYLIEDLIKGVIPFDTVT  173 (213)
Q Consensus        95 ~v~v~NPN~~~i~y~~~~~~v~Y~g~~lg-~~~~p~f~~~~r~tt~v~~~v~~~~~~l~~~~~~l~~D~~~G~v~l~~~~  173 (213)
                      +|+++|||.++++|++.+++++|+|..+| ....++|+|++++++.+.+.+.++...+   ...+.++. +|..++++.+
T Consensus         1 ~l~v~NPN~~~i~~~~~~~~v~~~g~~v~~~~~~~~~~i~~~~~~~v~~~v~~~~~~l---~~~l~~~~-~~~~~~~v~~   76 (101)
T PF03168_consen    1 TLSVRNPNSFGIRYDSIEYDVYYNGQRVGTGGSLPPFTIPARSSTTVPVPVSVDYSDL---PRLLKDLL-AGRVPFDVTY   76 (101)
T ss_dssp             EEEEEESSSS-EEEEEEEEEEEESSSEEEEEEECE-EEESSSCEEEEEEEEEEEHHHH---HHHHHHHH-HTTSCEEEEE
T ss_pred             CEEEECCCceeEEEeCEEEEEEECCEEEECccccCCeEECCCCcEEEEEEEEEcHHHH---HHHHHhhh-ccccceEEEE
Confidence            58999999999999999999999999999 6778999999999999998887776553   33455555 7778889999


Q ss_pred             EEEEEEEE-E-EEeeceEEEEEEE
Q 028106          174 MVKGELGV-L-FFEIPLKAKVSCE  195 (213)
Q Consensus       174 ~v~grv~v-~-~~~~~~~~~v~C~  195 (213)
                      +++|++++ + .+..+..+.++|+
T Consensus        77 ~~~g~~~v~~~~~~~~~~v~~~~~  100 (101)
T PF03168_consen   77 RIRGTFKVLGTPIFGSVRVPVSCE  100 (101)
T ss_dssp             EEEEEEE-EE-TTTSCEEEEEEEE
T ss_pred             EEEEEEEEcccceeeeEEEeEEeE
Confidence            99999995 3 2234555555554

The function of these proteins is unknown. ; PDB: 3BUT_A 1XO8_A 1YYC_A.

>PF07092 DUF1356: Protein of unknown function (DUF1356); InterPro: IPR009790 This family consists of several hypothetical mammalian proteins of around 250 residues in length

Probab=99.51  E-value=2.8e-12  Score=107.09  Aligned_cols=125  Identities=17%  Similarity=0.322  Sum_probs=102.7

Q ss_pred             CceeeccCCCCCchhhhhcccCcceehhHHHHHHHHHhheeeEEecCCCeEEEEEEEEcceeecCCCCceeeEEEEEEEE
Q 028106           18 ENVIVLPVYYQPDLRRWRRRRNLSRCLCTAAAIASLLAVLVFIFYPSDPYLQLARIHLNHIRVNSSPQPTLDLSFSLVVK   97 (213)
Q Consensus        18 ~~~~~~~p~~~~~~~~~~~~~~~~~c~~~~~~~l~ll~~~~~v~~P~~P~~~V~~~~l~~f~~~~~p~~~l~~~l~~~v~   97 (213)
                      ++.+||+|+.++|.|+|  |.++ ..++.++++|++.+++.|.|-||.-.++-.++......++.. ...+..+++-.++
T Consensus        56 ~qLVALIPy~DqRLKPr--RTkl-yV~~sV~~CLl~~~L~iFFLfPRsV~v~~~gv~s~~V~f~~~-~~~v~l~itn~lN  131 (238)
T PF07092_consen   56 NQLVALIPYSDQRLKPR--RTKL-YVFLSVLLCLLLSGLVIFFLFPRSVTVSPVGVKSVTVSFNPD-KSTVQLNITNTLN  131 (238)
T ss_pred             hcEEEEEeccccccCCc--eeEE-EeeHHHHHHHHHHHheEEEEeCcEEEEecCcEEEEEEEEeCC-CCEEEEEEEEEEE
Confidence            45589999999999886  5556 778888889999998888888988777666655555555432 2468889999999


Q ss_pred             EEcCCceEEEEcceEEEEEECCEEEeeeEeCCC-ccCCCCeEEEEEEEEE
Q 028106           98 VHNRDFFSLNYDSLDVSIGYRGRELGSVRSHGG-RVRARGSSYVNASLKL  146 (213)
Q Consensus        98 v~NPN~~~i~y~~~~~~v~Y~g~~lg~~~~p~f-~~~~r~tt~v~~~v~~  146 (213)
                      +.|||++++...+.++++.|....+|.+..... .+++++.+.+..++..
T Consensus       132 IsN~NFy~V~Vt~~s~qv~~~~~VVG~~~~~~~~~I~Prs~~q~~~tV~t  181 (238)
T PF07092_consen  132 ISNPNFYPVTVTNLSIQVLYMKTVVGKGKNSNITVIGPRSSKQVNYTVKT  181 (238)
T ss_pred             ccCCCEEEEEEEeEEEEEEEEEeEEeeeEecceEEecccCCceEEEEeeE
Confidence            999999999999999999999999999988766 7899998888876654

The function of this family is unknown.

>smart00769 WHy Water Stress and Hypersensitive response

Probab=99.04  E-value=4.3e-09  Score=77.41  Aligned_cols=76  Identities=25%  Similarity=0.344  Sum_probs=65.3

Q ss_pred             eeeEEEEEEEEEEcCCceEEEEcceEEEEEECCEEEeeeEeC-CCccCCCCeEEEEEEEEEcceeeccchHHHHhhhhcC
Q 028106           87 TLDLSFSLVVKVHNRDFFSLNYDSLDVSIGYRGRELGSVRSH-GGRVRARGSSYVNASLKLNGLEVIHDVIYLIEDLIKG  165 (213)
Q Consensus        87 ~l~~~l~~~v~v~NPN~~~i~y~~~~~~v~Y~g~~lg~~~~p-~f~~~~r~tt~v~~~v~~~~~~l~~~~~~l~~D~~~G  165 (213)
                      .++.++.+.+++.|||.+++.+++.+.+++|+|..+|++..+ .+.+++++++.+.+++.+..    .+...+..++.+|
T Consensus        12 ~~~~~~~l~l~v~NPN~~~l~~~~~~y~l~~~g~~v~~g~~~~~~~ipa~~~~~v~v~~~~~~----~~~~~~~~~l~~~   87 (100)
T smart00769       12 GLEIEIVLKVKVQNPNPFPIPVNGLSYDLYLNGVELGSGEIPDSGTLPGNGRTVLDVPVTVNL----FLAEALIWHIANG   87 (100)
T ss_pred             ceEEEEEEEEEEECCCCCccccccEEEEEEECCEEEEEEEcCCCcEECCCCcEEEEEEEEeeh----hHhHHHHHhhccC
Confidence            678899999999999999999999999999999999999985 79999999999999988732    2234567777766


Q ss_pred             e
Q 028106          166 V  166 (213)
Q Consensus       166 ~  166 (213)
                      .
T Consensus        88 ~   88 (100)
T smart00769       88 E   88 (100)
T ss_pred             C
Confidence            4

>COG5608 LEA14-like dessication related protein [Defense mechanisms]

Probab=98.35  E-value=7.9e-05  Score=58.39  Aligned_cols=109  Identities=14%  Similarity=0.206  Sum_probs=82.1

Q ss_pred             cCCCeEEEEEEEEcceeecCCCCceeeEEEEEEEEEEcCCceEEEEcceEEEEEECCEEEeeeEe-CCCccCCCCeEEEE
Q 028106           63 PSDPYLQLARIHLNHIRVNSSPQPTLDLSFSLVVKVHNRDFFSLNYDSLDVSIGYRGRELGSVRS-HGGRVRARGSSYVN  141 (213)
Q Consensus        63 P~~P~~~V~~~~l~~f~~~~~p~~~l~~~l~~~v~v~NPN~~~i~y~~~~~~v~Y~g~~lg~~~~-p~f~~~~r~tt~v~  141 (213)
                      -++|.+.--.++.-...-       ....+-.+++++|||-+++-..+.+.+++-+|..+|++.. .++.+++++..+++
T Consensus        30 ~~~p~ve~~ka~wGkvt~-------s~~EiV~t~KiyNPN~fPipVtgl~y~vymN~Iki~eG~~~k~~~v~p~S~~tvd  102 (161)
T COG5608          30 VKKPGVESMKAKWGKVTN-------SETEIVGTLKIYNPNPFPIPVTGLQYAVYMNDIKIGEGEILKGTTVPPNSRETVD  102 (161)
T ss_pred             cCCCCceEEEEEEEEEec-------cceEEEEEEEecCCCCcceeeeceEEEEEEcceEeeccccccceEECCCCeEEEE
Confidence            467888777777766542       4456788999999999999999999999999999999985 56899999999999


Q ss_pred             EEEEEcceeeccchHHHHhhhhcCeEeEEEEEEEEEEEEEE
Q 028106          142 ASLKLNGLEVIHDVIYLIEDLIKGVIPFDTVTMVKGELGVL  182 (213)
Q Consensus       142 ~~v~~~~~~l~~~~~~l~~D~~~G~v~l~~~~~v~grv~v~  182 (213)
                      +++.++...+   ......++.+|+=. .+++++.+.++++
T Consensus       103 v~l~~d~~~~---ke~w~~hi~ngErs-~Ir~~i~~~v~vg  139 (161)
T COG5608         103 VPLRLDNSKI---KEWWVTHIENGERS-TIRVRIKGVVKVG  139 (161)
T ss_pred             EEEEEehHHH---HHHHHHHhhccCcc-cEEEEEEEEEEEc
Confidence            9988876443   22345577777521 2344455555554

>PF12751 Vac7: Vacuolar segregation subunit 7; InterPro: IPR024260 Vac7 is localised at the vacuole membrane, a location which is consistent with its involvement in vacuole morphology and inheritance []

Probab=97.58  E-value=0.00016  Score=64.58  Aligned_cols=80  Identities=19%  Similarity=0.489  Sum_probs=51.6

Q ss_pred             cceehhHHHHHHHHHh-heeeEEecCCCeEEEEEEEEcceeecCCCCceeeEEEEEEEEEEcCCceEEEEcceEEEEEEC
Q 028106           40 LSRCLCTAAAIASLLA-VLVFIFYPSDPYLQLARIHLNHIRVNSSPQPTLDLSFSLVVKVHNRDFFSLNYDSLDVSIGYR  118 (213)
Q Consensus        40 ~~~c~~~~~~~l~ll~-~~~~v~~P~~P~~~V~~~~l~~f~~~~~p~~~l~~~l~~~v~v~NPN~~~i~y~~~~~~v~Y~  118 (213)
                      .++|+++.+++||+++ ++.|+|--..|--.|+=+.+++.-.+     .-.+=|+++|++.|||.+.|..++.++.++-+
T Consensus       302 ~~~c~~~~i~~lL~ig~~~gFv~AttKpL~~v~v~~I~NVlaS-----~qELmfdl~V~A~NPn~~~V~I~d~dldIFAK  376 (387)
T PF12751_consen  302 FASCIYLSILLLLVIGFAIGFVFATTKPLTDVQVVSIQNVLAS-----EQELMFDLTVEAFNPNWFTVTIDDMDLDIFAK  376 (387)
T ss_pred             hhHHHHHHHHHHHHHHHHHHhhhhcCcccccceEEEeeeeeec-----cceEEEeeEEEEECCCeEEEEeccceeeeEec
Confidence            3455544444444333 45666655555444444455554332     33445788999999999999999999999876


Q ss_pred             CEEEee
Q 028106          119 GRELGS  124 (213)
Q Consensus       119 g~~lg~  124 (213)
                      -..+|.
T Consensus       377 S~yvg~  382 (387)
T PF12751_consen  377 SRYVGT  382 (387)
T ss_pred             CCccCc
Confidence            655554

Vac7 has been shown to function as an upstream regulator of the Fab1 lipid kinase pathway []. The Fab1 lipid pathway is important for correct regulation of membrane trafficking events.

>PLN03160 uncharacterized protein; Provisional

Probab=90.46  E-value=8.9  Score=32.02  Aligned_cols=42  Identities=24%  Similarity=0.362  Sum_probs=19.4

Q ss_pred             ccCcceehhHHHHHHHHHh-heeeEEe-cCCCeEEEEEEEEcceee
Q 028106           37 RRNLSRCLCTAAAIASLLA-VLVFIFY-PSDPYLQLARIHLNHIRV   80 (213)
Q Consensus        37 ~~~~~~c~~~~~~~l~ll~-~~~~v~~-P~~P~~~V~~~~l~~f~~   80 (213)
                      +|+|++||+++++++++++ ++..++| -=.|  +--.++++++++
T Consensus        33 r~~~~~c~~~~~a~~l~l~~v~~~l~~~vfrP--k~P~~~v~~v~l   76 (219)
T PLN03160         33 RRNCIKCCGCITATLLILATTILVLVFTVFRV--KDPVIKMNGVTV   76 (219)
T ss_pred             cccceEEHHHHHHHHHHHHHHHHheeeEEEEc--cCCeEEEEEEEE
Confidence            3455566666655555444 3333334 2222  223445555554

>PF11837 DUF3357: Domain of unknown function (DUF3357); InterPro: IPR021792 This entry represents the N-terminal domain of beta-fructofuranosidase, whcih is involved in the hydrolysis of terminal non-reducing beta-D-fructofuranoside residues in beta-D-fructofuranosides

Probab=90.18  E-value=0.086  Score=39.15  Aligned_cols=13  Identities=31%  Similarity=0.557  Sum_probs=0.0

Q ss_pred             CCccccCCCCCce
Q 028106            8 DHVAYAPLPTENV   20 (213)
Q Consensus         8 ~~~~~~~~p~~~~   20 (213)
                      .+..|+|+|++..
T Consensus         3 ~p~sY~PLP~~~~   15 (106)
T PF11837_consen    3 LPYSYTPLPDSSE   15 (106)
T ss_dssp             -------------
T ss_pred             CCCccCCCCCCCc
Confidence            3456999998765

; GO: 0004564 beta-fructofuranosidase activity, 0004575 sucrose alpha-glucosidase activity; PDB: 3UGG_A 3UGH_B 3UGF_B.

>PRK05529 cell division protein FtsQ; Provisional

Probab=81.17  E-value=1.7  Score=37.22  Aligned_cols=46  Identities=15%  Similarity=0.036  Sum_probs=28.7

Q ss_pred             CCeEEEEEEEEcceeecC-----------CCCceeeE--------------EEEEEEEEEcCCceEEEEcc
Q 028106           65 DPYLQLARIHLNHIRVNS-----------SPQPTLDL--------------SFSLVVKVHNRDFFSLNYDS  110 (213)
Q Consensus        65 ~P~~~V~~~~l~~f~~~~-----------~p~~~l~~--------------~l~~~v~v~NPN~~~i~y~~  110 (213)
                      .|-|.|.++++++-...+           .....+..              ==+++++-+.||.+.|+..+
T Consensus        58 Sp~~~v~~I~V~Gn~~vs~~eI~~~~~~~~g~~l~~vd~~~~~~~l~~~P~V~sa~V~r~~P~tl~I~V~E  128 (255)
T PRK05529         58 SPLLALRSIEVAGNMRVKPQDIVAALRDQFGKPLPLVDPETVRKKLAAFPLIRSYSVESKPPGTIVVRVVE  128 (255)
T ss_pred             CCceEEEEEEEECCccCCHHHHHHHhcccCCCcceeECHHHHHHHHhcCCCEeEEEEEEeCCCEEEEEEEE
Confidence            589999999998654321           00011111              12567888899988777765

>PF14155 DUF4307: Domain of unknown function (DUF4307)

Probab=81.05  E-value=14  Score=27.51  Aligned_cols=74  Identities=14%  Similarity=0.146  Sum_probs=34.4

Q ss_pred             eehhHHHHHHHHHhheeeEEe-cCCCeEEEEEEEEcceeecCCCCceeeEEEEEEEEEEcCCc-eEEEEcceEEEEEECC
Q 028106           42 RCLCTAAAIASLLAVLVFIFY-PSDPYLQLARIHLNHIRVNSSPQPTLDLSFSLVVKVHNRDF-FSLNYDSLDVSIGYRG  119 (213)
Q Consensus        42 ~c~~~~~~~l~ll~~~~~v~~-P~~P~~~V~~~~l~~f~~~~~p~~~l~~~l~~~v~v~NPN~-~~i~y~~~~~~v~Y~g  119 (213)
                      ..++.++++++++.++|+.+. ...|.++-   +..+|.+.++  ..++.+|++  +-. |.. ..=..    -..-|++
T Consensus         7 ~~~~~v~~vv~~~~~~w~~~~~~~~~~v~~---~~~gf~vv~d--~~v~v~f~V--tr~-~~~~a~C~V----rA~~~d~   74 (112)
T PF14155_consen    7 VIAGAVLVVVAGAVVAWFGYSQFGSPPVSA---EVIGFEVVDD--STVEVTFDV--TRD-PGRPAVCIV----RALDYDG   74 (112)
T ss_pred             EehHHHHHHHHHHHHhHhhhhhccCCCceE---EEEEEEECCC--CEEEEEEEE--EEC-CCCCEEEEE----EEEeCCC
Confidence            344444444445555676665 56666643   4444444332  244443333  322 542 11111    1123677


Q ss_pred             EEEeeeEe
Q 028106          120 RELGSVRS  127 (213)
Q Consensus       120 ~~lg~~~~  127 (213)
                      ..+|.-.+
T Consensus        75 aeVGrreV   82 (112)
T PF14155_consen   75 AEVGRREV   82 (112)
T ss_pred             CEEEEEEE
Confidence            78886543

>PF11906 DUF3426: Protein of unknown function (DUF3426); InterPro: IPR021834 This family of proteins are functionally uncharacterised

Probab=80.39  E-value=13  Score=28.52  Aligned_cols=76  Identities=13%  Similarity=0.127  Sum_probs=50.7

Q ss_pred             EEEEEEEEcceeecCCCCceeeEEEEEEEEEEcCCceEEEEcceEEEEE-ECCEEEeeeEe-C----------CCccCCC
Q 028106           68 LQLARIHLNHIRVNSSPQPTLDLSFSLVVKVHNRDFFSLNYDSLDVSIG-YRGRELGSVRS-H----------GGRVRAR  135 (213)
Q Consensus        68 ~~V~~~~l~~f~~~~~p~~~l~~~l~~~v~v~NPN~~~i~y~~~~~~v~-Y~g~~lg~~~~-p----------~f~~~~r  135 (213)
                      ..++.+++.+..+...+  .-+-.+.++.+++|-......|-.+.++++ -+|+.+++-.+ |          .-.++++
T Consensus        48 ~~~~~l~i~~~~~~~~~--~~~~~l~v~g~i~N~~~~~~~~P~l~l~L~D~~g~~l~~r~~~P~~yl~~~~~~~~~l~pg  125 (149)
T PF11906_consen   48 RDIDALKIESSDLRPVP--DGPGVLVVSGTIRNRADFPQALPALELSLLDAQGQPLARRVFTPADYLPPGLAAQAGLPPG  125 (149)
T ss_pred             cCcceEEEeeeeEEeec--CCCCEEEEEEEEEeCCCCcccCceEEEEEECCCCCEEEEEEEChHHhcccccccccccCCC
Confidence            45556666554443322  233456788999999999999999999988 67888887765 4          2345666


Q ss_pred             CeEEEEEEEE
Q 028106          136 GSSYVNASLK  145 (213)
Q Consensus       136 ~tt~v~~~v~  145 (213)
                      .+..+..++.
T Consensus       126 ~~~~~~~~~~  135 (149)
T PF11906_consen  126 ESVPFRLRLE  135 (149)
T ss_pred             CeEEEEEEee
Confidence            6666655443

This protein is found in bacteria. Proteins in this family are typically between 262 to 463 amino acids in length.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	213
1yyc_A	174	LEA protein, putative late embryogenesis abundant	98.83
1xo8_A	151	AT1G01470; structural genomics, protein structure	98.75
3but_A	136	Uncharacterized protein AF_0446; lipid binding pro	98.42

>1yyc_A LEA protein, putative late embryogenesis abundant protein; structural genomics, protein structure initiative, CESG; NMR {Arabidopsis thaliana}

Probab=98.83  E-value=1.7e-08  Score=80.36  Aligned_cols=101  Identities=13%  Similarity=0.151  Sum_probs=81.4

Q ss_pred             CCCeEEEEEEEEcceeecCCCCceeeEEEEEEEEEEcCCceEEEEcceEEEEEECCEEEeeeEeCC-CccCCCCeEEEEE
Q 028106           64 SDPYLQLARIHLNHIRVNSSPQPTLDLSFSLVVKVHNRDFFSLNYDSLDVSIGYRGRELGSVRSHG-GRVRARGSSYVNA  142 (213)
Q Consensus        64 ~~P~~~V~~~~l~~f~~~~~p~~~l~~~l~~~v~v~NPN~~~i~y~~~~~~v~Y~g~~lg~~~~p~-f~~~~r~tt~v~~  142 (213)
                      +.|++++.++++.+++.       ..++|.+.++++|||-+++.+.+++.++.-+|..++++.++. +.+++++++.+.+
T Consensus        43 ~~PeV~v~~v~~~~~~l-------~~~~~~l~LrV~NPN~~pLpi~gi~Y~L~vnG~~lasG~s~~~~tIpa~g~~~v~V  115 (174)
T 1yyc_A           43 PTPEATVDDVDFKGVTR-------DGVDYHAKVSVKNPYSQSIPICQISYILKSATRTIASGTIPDPGSLVGSGTTVLDV  115 (174)
T ss_dssp             CCCEEEEEEEEEEEECS-------SSEEEEEEEEEEECSSSCCBCCSEEEEEEESSSCEEEEEESCCCBCCSSEEEEEEE
T ss_pred             CCCEEEEEEeEEecccc-------ceEEEEEEEEEECCCCCCccccceEEEEEECCEEEEEEecCCCceECCCCcEEEEE
Confidence            78999999999998865       346789999999999999999999999999999999999875 7999999999999


Q ss_pred             EEEEcceeeccchHHHHhhhhc-CeEeEEEEEEE
Q 028106          143 SLKLNGLEVIHDVIYLIEDLIK-GVIPFDTVTMV  175 (213)
Q Consensus       143 ~v~~~~~~l~~~~~~l~~D~~~-G~v~l~~~~~v  175 (213)
                      ++++....+    .++++|+.. +.++.++++++
T Consensus       116 pv~v~~~~l----~~~~~~l~~~~~i~Y~L~g~L  145 (174)
T 1yyc_A          116 PVKVAYSIA----VSLMKDMCTDWDIDYQLDIGL  145 (174)
T ss_dssp             EEEESHHHH----HHTCCCCCSSEEECEEEEEEE
T ss_pred             EEEEEHHHH----HHHHHhcCCCCccceEEEEEE
Confidence            988775332    234455543 45665554443

>1xo8_A AT1G01470; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG, unknown function; NMR {Arabidopsis thaliana} SCOP: b.1.25.1

Probab=98.75  E-value=8.9e-09  Score=80.28  Aligned_cols=101  Identities=15%  Similarity=0.181  Sum_probs=80.0

Q ss_pred             CCCeEEEEEEEEcceeecCCCCceeeEEEEEEEEEEcCCceEEEEcceEEEEEECCEEEeeeEeC-CCccCCCCeEEEEE
Q 028106           64 SDPYLQLARIHLNHIRVNSSPQPTLDLSFSLVVKVHNRDFFSLNYDSLDVSIGYRGRELGSVRSH-GGRVRARGSSYVNA  142 (213)
Q Consensus        64 ~~P~~~V~~~~l~~f~~~~~p~~~l~~~l~~~v~v~NPN~~~i~y~~~~~~v~Y~g~~lg~~~~p-~f~~~~r~tt~v~~  142 (213)
                      +.|++++.++++.+++.       ...+|.+.++++|||-+++.+.+.+.++.-+|..++++..+ ++.+++++++.+.+
T Consensus        20 ~~P~v~v~~v~~~~~~~-------~~~~~~~~l~V~NPN~~~lpi~gi~y~l~vng~~lasG~~~~~~~ipa~g~~~v~v   92 (151)
T 1xo8_A           20 PKPEGSVTDVDLKDVNR-------DSVEYLAKVSVTNPYSHSIPICEISFTFHSAGREIGKGKIPDPGSLKAKDMTALDI   92 (151)
T ss_dssp             CSCCCBCSEEEECCCTT-------TEECEEEEEEEECSSSSCCCCEEEEEEEESSSSCEEEEEEEECCCCSSSSEEEEEE
T ss_pred             CCCEEEEEEeEEeccCc-------ceeEEEEEEEEECCCCCCcccccEEEEEEECCEEEEEEecCCCcEECCCCcEEEEE
Confidence            67999999999987754       34578999999999999999999999999999999999986 58999999999998


Q ss_pred             EEEEcceeeccchHHHHhhhh-cCeEeEEEEEEE
Q 028106          143 SLKLNGLEVIHDVIYLIEDLI-KGVIPFDTVTMV  175 (213)
Q Consensus       143 ~v~~~~~~l~~~~~~l~~D~~-~G~v~l~~~~~v  175 (213)
                      ++++....    ..++.+++. .+.++.++++++
T Consensus        93 pv~v~~~~----l~~~~~~l~~~~~i~Y~l~g~l  122 (151)
T 1xo8_A           93 PVVVPYSI----LFNLARDVGVDWDIDYELQIGL  122 (151)
T ss_dssp             CCCEEHHH----HHHHHHHHHHHSEEEEEEEEEE
T ss_pred             EEEEEHHH----HHHHHHhcccCCcccEEEEEEE
Confidence            88766433    234455553 456666654444

>3but_A Uncharacterized protein AF_0446; lipid binding protein, beta barrel, protein structure initia PSI-2; 1.91A {Archaeoglobus fulgidus dsm 4304}

Probab=98.42  E-value=2.6e-06  Score=65.13  Aligned_cols=74  Identities=16%  Similarity=0.247  Sum_probs=61.5

Q ss_pred             eEEEEEEEEEEcCCceEEEEcceEEEEEECCEEEeeeEe-CCCccCCCCeEEEEEEEEEcceeeccchHHHHhhhhcC
Q 028106           89 DLSFSLVVKVHNRDFFSLNYDSLDVSIGYRGRELGSVRS-HGGRVRARGSSYVNASLKLNGLEVIHDVIYLIEDLIKG  165 (213)
Q Consensus        89 ~~~l~~~v~v~NPN~~~i~y~~~~~~v~Y~g~~lg~~~~-p~f~~~~r~tt~v~~~v~~~~~~l~~~~~~l~~D~~~G  165 (213)
                      ...|.+.+++.|||.+++.+++.+..++.+|..+|++.. ..+.+++.+++.+.+++.++..++..   .+.+.+.+|
T Consensus        17 ~t~~~~~l~V~NPN~~~l~i~gl~y~v~lng~~la~G~s~~~~~I~~~g~~~v~v~~~i~~~~l~~---~~~~hi~ng   91 (136)
T 3but_A           17 QTEIVALAKVRNEDVVPIVVSGYHYTIEMNGVKVADGYENSPVTVKPASATTLKFSLRLNNSFLRE---WWVTHIANG   91 (136)
T ss_dssp             EEEEEEEEEEECCSSSCEEEEEEEEEEEETTEEEEEEEECCCEEECTTCEEEEEEEEEEEHHHHTT---HHHHHHHTT
T ss_pred             EEEEEEEEEEeCCCCcceeeeceEEEEEECCEEEEeeeecCceEECCCCcEEEEEEEEEchHHhHH---HHHHHhhcC
Confidence            456889999999999999999999999999999999985 67899999999999998888655433   345555555

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	213
d1xo8a_	151	b.1.25.1 (A:) Putative dessication related protein	2e-04

>d1xo8a_ b.1.25.1 (A:) Putative dessication related protein LEA14 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 151

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: LEA14-like
family: LEA14-like
domain: Putative dessication related protein LEA14
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 37.9 bits (88), Expect = 2e-04
 Identities = 21/126 (16%), Positives = 47/126 (37%), Gaps = 14/126 (11%)

Query: 66  PYLQLARIHLNHIRVNSSPQPTLDLSFSLVVKVHNRDFFSLNYDSLDVSIGYRGRELGSV 125
           P   +  + L  +  +S         +   V V N    S+    +  +    GRE+G  
Sbjct: 22  PEGSVTDVDLKDVNRDSV-------EYLAKVSVTNPYSHSIPICEISFTFHSAGREIGKG 74

Query: 126 RS-HGGRVRARGSSYVNASLKLNGLEVIHDVIYLIEDLIKG-VIPFDTVTMVKGELGVLF 183
           +    G ++A+  + ++  + +        +  L  D+     I ++    +  +L V+ 
Sbjct: 75  KIPDPGSLKAKDMTALDIPVVVP----YSILFNLARDVGVDWDIDYELQIGLTIDLPVVG 130

Query: 184 -FEIPL 188
            F IP+
Sbjct: 131 EFTIPI 136

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	213
d1xo8a_	151	Putative dessication related protein LEA14 {Thale	98.74

>d1xo8a_ b.1.25.1 (A:) Putative dessication related protein LEA14 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: LEA14-like
family: LEA14-like
domain: Putative dessication related protein LEA14
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=98.74  E-value=5.3e-09  Score=79.70  Aligned_cols=122  Identities=15%  Similarity=0.173  Sum_probs=88.3

Q ss_pred             cCCCeEEEEEEEEcceeecCCCCceeeEEEEEEEEEEcCCceEEEEcceEEEEEECCEEEeeeEeC-CCccCCCCeEEEE
Q 028106           63 PSDPYLQLARIHLNHIRVNSSPQPTLDLSFSLVVKVHNRDFFSLNYDSLDVSIGYRGRELGSVRSH-GGRVRARGSSYVN  141 (213)
Q Consensus        63 P~~P~~~V~~~~l~~f~~~~~p~~~l~~~l~~~v~v~NPN~~~i~y~~~~~~v~Y~g~~lg~~~~p-~f~~~~r~tt~v~  141 (213)
                      -+.|++++.++++.+++.       ...++.+.++++|||-+++...+.+.+++.+|..++++..+ ++.+++++++.+.
T Consensus        19 ~~kPev~l~~v~i~~v~~-------~~~~l~~~l~V~NPN~~~l~i~~l~y~l~~~g~~ia~G~~~~~~~ipa~~~~~v~   91 (151)
T d1xo8a_          19 IPKPEGSVTDVDLKDVNR-------DSVEYLAKVSVTNPYSHSIPICEISFTFHSAGREIGKGKIPDPGSLKAKDMTALD   91 (151)
T ss_dssp             CCSCCCBCSEEEECCCTT-------TEECEEEEEEEECSSSSCCCCEEEEEEEESSSSCEEEEEEEECCCCSSSSEEEEE
T ss_pred             CCCCeEEEEEEEeeeccc-------ceEEEEEEEEEECCCCCceeeeeEEEEEEECCEEEEeEecCCCcEEcCCCcEEEE
Confidence            467999999999998765       34568999999999999999999999999999999999875 5799999999999


Q ss_pred             EEEEEcceeeccchHHHHhhhhc-CeEeEEEEEEEEEEEEEE--EE-eeceEEEEEEEEEEe
Q 028106          142 ASLKLNGLEVIHDVIYLIEDLIK-GVIPFDTVTMVKGELGVL--FF-EIPLKAKVSCEVYVN  199 (213)
Q Consensus       142 ~~v~~~~~~l~~~~~~l~~D~~~-G~v~l~~~~~v~grv~v~--~~-~~~~~~~v~C~v~v~  199 (213)
                      +++++...    +...+.+|+.+ +.++.+    ++|++.+.  .+ ...+.+.-+-++.+.
T Consensus        92 vpv~v~~~----~l~~~~~~i~~~~~i~Y~----l~g~l~~d~pv~G~~tiP~~~~Gei~lP  145 (151)
T d1xo8a_          92 IPVVVPYS----ILFNLARDVGVDWDIDYE----LQIGLTIDLPVVGEFTIPISSKGEIKLP  145 (151)
T ss_dssp             ECCCEEHH----HHHHHHHHHHHHSEEEEE----EEEEEEECCTTTSSEEEEEEEEEEEECC
T ss_pred             EEEEEEHH----HHHHHHHhhccCCCccEE----EEEEEEEecCccCceEeeeccCCEEECC
Confidence            88776532    23345566543 455544    55555542  11 223444444455543