Citrus Sinensis ID: 028219
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 212 | ||||||
| 449458131 | 309 | PREDICTED: uncharacterized protein LOC10 | 0.990 | 0.679 | 0.577 | 1e-75 | |
| 4567251 | 303 | unknown protein [Arabidopsis thaliana] | 0.754 | 0.528 | 0.541 | 1e-54 | |
| 255570157 | 240 | conserved hypothetical protein [Ricinus | 0.424 | 0.375 | 0.849 | 2e-38 | |
| 449515905 | 367 | PREDICTED: uncharacterized LOC101220530 | 0.613 | 0.354 | 0.604 | 3e-38 | |
| 224103959 | 360 | predicted protein [Populus trichocarpa] | 0.443 | 0.261 | 0.804 | 8e-38 | |
| 225465845 | 362 | PREDICTED: uncharacterized protein LOC10 | 0.575 | 0.337 | 0.610 | 2e-37 | |
| 147844794 | 416 | hypothetical protein VITISV_011144 [Viti | 0.575 | 0.293 | 0.610 | 3e-37 | |
| 296083855 | 359 | unnamed protein product [Vitis vinifera] | 0.608 | 0.359 | 0.674 | 4e-37 | |
| 323370570 | 357 | root determined nodulation 1 [Medicago t | 0.589 | 0.350 | 0.603 | 4e-37 | |
| 356577618 | 368 | PREDICTED: uncharacterized protein LOC10 | 0.613 | 0.353 | 0.605 | 4e-37 |
| >gi|449458131|ref|XP_004146801.1| PREDICTED: uncharacterized protein LOC101220530 [Cucumis sativus] | Back alignment and taxonomy information |
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Score = 288 bits (736), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 145/251 (57%), Positives = 172/251 (68%), Gaps = 41/251 (16%)
Query: 1 MIGRKNLG-VSSFLLVLLALGFFFATYNLLTMVIQ-NKAADEIG-------KLNPLTQMP 51
MIGRKN G S LVLLAL F F TYNL+T +IQ E+G +P+ +MP
Sbjct: 1 MIGRKNTGQASPLFLVLLALTFCFVTYNLVTAIIQYGSVGREVGHDSYNHLSTDPIIEMP 60
Query: 52 EKTGGGNSGMRFHVALTATDAIYSQWQSRIMYYWYKKVKDMPRSDMGKFTRILHSGKADN 111
EK + FHVALTATDA YS+WQ RIMYYWYKK K++P+S+MG FTRILHSGK DN
Sbjct: 61 EKVKRKKTKSPFHVALTATDAPYSKWQCRIMYYWYKKKKNLPQSEMGGFTRILHSGKPDN 120
Query: 112 LMDEIPSFVVDPLPEGLDRY--------------------------------LLEEISPT 139
LMDEIP+ VVDPLP G+DR L+E+I+PT
Sbjct: 121 LMDEIPTMVVDPLPAGMDRIVHTRQNLKPIHRYSLTTSIDPIGNSPVIIRKDLIEKIAPT 180
Query: 140 WLNVSLRMKDDHETDKQFGWVLEMYAYAVASALHGVRHILRKDFMLQPPWDPEVGKRFIL 199
W+N+SL+MK+D E DK FGWVLEMYAYAVASALHGV+H+LRKDFMLQPPWD +G++FI+
Sbjct: 181 WMNISLKMKEDPEADKIFGWVLEMYAYAVASALHGVQHVLRKDFMLQPPWDLAIGRKFII 240
Query: 200 HYTYGCDYNLK 210
HYTYGCDYNLK
Sbjct: 241 HYTYGCDYNLK 251
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Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|4567251|gb|AAD23665.1| unknown protein [Arabidopsis thaliana] | Back alignment and taxonomy information |
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| >gi|255570157|ref|XP_002526039.1| conserved hypothetical protein [Ricinus communis] gi|223534620|gb|EEF36316.1| conserved hypothetical protein [Ricinus communis] | Back alignment and taxonomy information |
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| >gi|449515905|ref|XP_004164988.1| PREDICTED: uncharacterized LOC101220530 [Cucumis sativus] | Back alignment and taxonomy information |
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| >gi|224103959|ref|XP_002313261.1| predicted protein [Populus trichocarpa] gi|222849669|gb|EEE87216.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
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| >gi|225465845|ref|XP_002264860.1| PREDICTED: uncharacterized protein LOC100244671 [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|147844794|emb|CAN83338.1| hypothetical protein VITISV_011144 [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|296083855|emb|CBI24243.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|323370570|gb|ADV35716.2| root determined nodulation 1 [Medicago truncatula] | Back alignment and taxonomy information |
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| >gi|356577618|ref|XP_003556921.1| PREDICTED: uncharacterized protein LOC100786003 [Glycine max] | Back alignment and taxonomy information |
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Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 212 | ||||||
| TAIR|locus:2185046 | 358 | AT5G13500 "AT5G13500" [Arabido | 0.424 | 0.251 | 0.677 | 1.1e-66 | |
| TAIR|locus:504955105 | 366 | AT5G25265 "AT5G25265" [Arabido | 0.433 | 0.251 | 0.642 | 1.1e-30 | |
| TAIR|locus:2059573 | 358 | AT2G25260 "AT2G25260" [Arabido | 0.433 | 0.256 | 0.631 | 4.9e-30 |
| TAIR|locus:2185046 AT5G13500 "AT5G13500" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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Score = 355 (130.0 bits), Expect = 1.1e-66, Sum P(2) = 1.1e-66
Identities = 63/93 (67%), Positives = 76/93 (81%)
Query: 121 VDPL---PEGLDRYLLEEISPTWLNVSLRMKDDHETDKQFGWVLEMYAYAVASALHGVRH 177
+DP+ P + + LE+I+PTW+NVSL MK+D ETDK FGWVLEMY YA+ASA+HGVRH
Sbjct: 208 IDPIGNSPVIISKESLEKIAPTWMNVSLTMKNDPETDKAFGWVLEMYGYAIASAIHGVRH 267
Query: 178 ILRKDFMLQPPWDPEVGKRFILHYTYGCDYNLK 210
ILRKDFMLQPPWD +FI+HYTYGCDYN+K
Sbjct: 268 ILRKDFMLQPPWDLSTKGKFIIHYTYGCDYNMK 300
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| TAIR|locus:504955105 AT5G25265 "AT5G25265" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2059573 AT2G25260 "AT2G25260" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
No hit with probability above 80.00
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
No homologous structure with e-value below 0.005
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
No hit with e-value below 0.005
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
No hit with probability above 80.00
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
No hit with e-value below 0.005
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
No hit with probability above 80.00