Citrus Sinensis ID: 028414


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------21
MARILNWGEDRRFDEMRSNLGKLAIFWIFQAVWVWTVSLPVTVVNASDRDPSVQAVDVIGWIMWSVGVSIEAIADQQKLSFKNSPENRGKWCNVGFWKYSRHPNYFGEIFLWWGIFVASTPVLDGAEWLVILGPIFLTLLLLFISGIPLLEESADKKFGNMPAYRLYKKTTSPLIPLPPVVYGNLPWWLKTILFELPLYSRNFPQEGPN
ccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHccccHHHHHHHHHcccccccccccccccHHHHHHHHHccccccccccccccc
ccEEccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHccccEHcccHHEccccccHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHccccHHHHHHHHHcccccccccHHHHHcHHHHHHHHHccccccccccccccc
marilnwgedrrfDEMRSNLGKLAIFWIFQAVWVWTVSLPvtvvnasdrdpsvqaVDVIGWIMWSVGVSIEAIADQQklsfknspenrgkwcnvgfwkysrhpnyfgeIFLWWGIFVastpvldgaeWLVILGPIFLTLLLLFISGiplleesadkkfgnmpayrlykkttspliplppvvygnlpWWLKTILFelplysrnfpqegpn
marilnwgedrrfdeMRSNLGKLAIFWIFQAVWVWTVSLPVTVVNASDRDPSVQAVDVIGWIMWSVGVSIEAIADQQklsfknspenrgKWCNVGFWKYSRHPNYFGEIFLWWGIFVASTPVLDGAEWLVILGPIFLTLLLLFISGIPLLEESADKKFGNMPAYRLYKKTTSPLIPLPPVVYGNLPWWLKTILFELPLysrnfpqegpn
MARILNWGEDRRFDEMRSNLGKLAIFWIFQAVWVWTVSLPVTVVNASDRDPSVQAVDVIGWIMWSVGVSIEAIADQQKLSFKNSPENRGKWCNVGFWKYSRHPNYFGEIFLWWGIFVASTPVLDGAEWlvilgpifltllllfisgipllEESADKKFGNMPAYRLYKKTTSPLIPLPPVVYGNLPWWLKTILFELPLYSRNFPQEGPN
*****NWG**RRFDEMRSNLGKLAIFWIFQAVWVWTVSLPVTVVNASDRDPSVQAVDVIGWIMWSVGVSIEAIADQQKLSFK****NRGKWCNVGFWKYSRHPNYFGEIFLWWGIFVASTPVLDGAEWLVILGPIFLTLLLLFISGIPLLEESADKKFGNMPAYRLYKKTTSPLIPLPPVVYGNLPWWLKTILFELPLYS*********
MAR**NWGEDRRFDEMRSNLGKLAIFWIFQAVWVWTVSLPVTVVNASDRDPSVQAVDVIGWIMWSVGVSIEAIADQQKLSFKNSPENRGKWCNVGFWKYSRHPNYFGEIFLWWGIFVASTPVLDGAEWLVILGPIFLTLLLLFISGIPLLEESADKKFGNMPAYRLYKKTTSPLIPLPPVVYGNLPWWLKTILFELPL***********
MARILNWGEDRRFDEMRSNLGKLAIFWIFQAVWVWTVSLPVTVVNASDRDPSVQAVDVIGWIMWSVGVSIEAIADQQKLSFKNSPENRGKWCNVGFWKYSRHPNYFGEIFLWWGIFVASTPVLDGAEWLVILGPIFLTLLLLFISGIPLLEESADKKFGNMPAYRLYKKTTSPLIPLPPVVYGNLPWWLKTILFELPLYSRNFPQEGPN
MARILNWGEDRRFDEMRSNLGKLAIFWIFQAVWVWTVSLPVTVVNASDRDPSVQAVDVIGWIMWSVGVSIEAIADQQKLSFKNSPENRGKWCNVGFWKYSRHPNYFGEIFLWWGIFVASTPVLDGAEWLVILGPIFLTLLLLFISGIPLLEESADKKFGNMPAYRLYKKTTSPLIPLPPVVYGNLPWWLKTILFELPLYSRN*******
iiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
iiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
iiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
iiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MARILNWGEDRRFDEMRSNLGKLAIFWIFQAVWVWTVSLPVTVVNASDRDPSVQAVDVIGWIMWSVGVSIEAIADQQKLSFKNSPENRGKWCNVGFWKYSRHPNYFGEIFLWWGIFVASTPVLDGAEWLVILGPIFLTLLLLFISGIPLLEESADKKFGNMPAYRLYKKTTSPLIPLPPVVYGNLPWWLKTILFELPLYSRNFPQEGPN
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query209
297734310307 unnamed protein product [Vitis vinifera] 1.0 0.680 0.847 1e-101
359491022291 PREDICTED: uncharacterized protein LOC10 1.0 0.718 0.847 1e-101
224133212292 predicted protein [Populus trichocarpa] 0.966 0.691 0.837 3e-96
449439449300 PREDICTED: uncharacterized protein LOC10 1.0 0.696 0.804 8e-93
363807524290 uncharacterized protein LOC100780288 [Gl 0.985 0.710 0.792 1e-92
356524674291 PREDICTED: uncharacterized protein LOC10 0.971 0.697 0.799 3e-92
449510955275 PREDICTED: uncharacterized protein LOC10 0.976 0.741 0.819 3e-92
255645461291 unknown [Glycine max] 0.985 0.707 0.787 5e-92
255583469 310 conserved hypothetical protein [Ricinus 1.0 0.674 0.809 1e-90
388493884291 unknown [Lotus japonicus] 0.985 0.707 0.772 9e-90
>gi|297734310|emb|CBI15557.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
 Score =  373 bits (958), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 178/210 (84%), Positives = 190/210 (90%), Gaps = 1/210 (0%)

Query: 1   MARILNWGEDRRFDEMRSNLGKLAIFWIFQAVWVWTVSLPVTVVNASDRDPSVQAVDVIG 60
           + RIL WGEDRRFDEMRSNLGKLA+FW FQAVWVWTVSLPVT+VNAS RDPS+QA D+IG
Sbjct: 82  LMRILQWGEDRRFDEMRSNLGKLAVFWTFQAVWVWTVSLPVTIVNASGRDPSLQAADIIG 141

Query: 61  WIMWSVGVSIEAIADQQKLSFKNSPENRGKWCNVGFWKYSRHPNYFGEIFLWWGIFVAST 120
           WIMWSVG++IEA ADQQKLSFKNSPENRGKWCNVG WKY+RHPNYFGEI LWWGIFVAST
Sbjct: 142 WIMWSVGITIEASADQQKLSFKNSPENRGKWCNVGVWKYTRHPNYFGEILLWWGIFVAST 201

Query: 121 PVLDGAEWLVILGPIFLTLLLLFISGIPLLEESADKKFGNMPAYRLYKKTTSPLIPLPPV 180
           PVL+GAEWLVILGPIFLTLLLLF+SGIPLLEESADKKFGN+  YRLYK TTSPL+PLPPV
Sbjct: 202 PVLEGAEWLVILGPIFLTLLLLFVSGIPLLEESADKKFGNVAGYRLYKSTTSPLVPLPPV 261

Query: 181 VYGNLPWWLK-TILFELPLYSRNFPQEGPN 209
           VYGNLP W K T L E P YSRN PQEG N
Sbjct: 262 VYGNLPSWFKTTFLLEFPFYSRNLPQEGQN 291




Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359491022|ref|XP_003634205.1| PREDICTED: uncharacterized protein LOC100853969 [Vitis vinifera] Back     alignment and taxonomy information
>gi|224133212|ref|XP_002321511.1| predicted protein [Populus trichocarpa] gi|222868507|gb|EEF05638.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|449439449|ref|XP_004137498.1| PREDICTED: uncharacterized protein LOC101219154 [Cucumis sativus] Back     alignment and taxonomy information
>gi|363807524|ref|NP_001241888.1| uncharacterized protein LOC100780288 [Glycine max] gi|255636515|gb|ACU18596.1| unknown [Glycine max] Back     alignment and taxonomy information
>gi|356524674|ref|XP_003530953.1| PREDICTED: uncharacterized protein LOC100782499 [Glycine max] Back     alignment and taxonomy information
>gi|449510955|ref|XP_004163821.1| PREDICTED: uncharacterized protein LOC101228363 [Cucumis sativus] Back     alignment and taxonomy information
>gi|255645461|gb|ACU23226.1| unknown [Glycine max] Back     alignment and taxonomy information
>gi|255583469|ref|XP_002532493.1| conserved hypothetical protein [Ricinus communis] gi|223527792|gb|EEF29892.1| conserved hypothetical protein [Ricinus communis] Back     alignment and taxonomy information
>gi|388493884|gb|AFK35008.1| unknown [Lotus japonicus] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query209
TAIR|locus:2027774302 AT1G73650 [Arabidopsis thalian 0.990 0.685 0.653 1.1e-71
TAIR|locus:2194090305 AT1G18180 [Arabidopsis thalian 0.985 0.675 0.647 7.7e-71
FB|FBgn0035914316 CG6282 [Drosophila melanogaste 0.942 0.623 0.443 7.3e-43
ZFIN|ZDB-GENE-030131-3630288 si:ch211-210c8.6 "si:ch211-210 0.851 0.618 0.398 3.1e-35
UNIPROTKB|G4N6G0335 MGG_03731 "Uncharacterized pro 0.588 0.367 0.450 7.6e-25
DICTYBASE|DDB_G0279829267 DDB_G0279829 "DUF1295 family p 0.822 0.644 0.353 2.6e-24
UNIPROTKB|Q74AM9256 GSU2323 "Uncharacterized prote 0.789 0.644 0.337 4.3e-22
TIGR_CMR|GSU_2323256 GSU_2323 "membrane protein, pu 0.789 0.644 0.337 4.3e-22
UNIPROTKB|G4NC19328 MGG_00459 "Uncharacterized pro 0.578 0.368 0.369 5.2e-21
UNIPROTKB|Q722V9257 LMOf2365_0620 "Putative membra 0.564 0.459 0.364 5.3e-17
TAIR|locus:2027774 AT1G73650 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 725 (260.3 bits), Expect = 1.1e-71, P = 1.1e-71
 Identities = 136/208 (65%), Positives = 150/208 (72%)

Query:     1 MARILNWGEDRRFDEMRSNLGKLAIFWIFQAVWVWTVSLPVTVVNASDRDPSVQAVDVIG 60
             + RIL WGEDRRFDE R N+ +L IFW  QAVWVWTVSLP+T+VNASD   S++  DVIG
Sbjct:    82 LMRILQWGEDRRFDEQRGNIVRLIIFWTLQAVWVWTVSLPLTLVNASDGGGSLKPADVIG 141

Query:    61 WIMWSVGVSIEAIADQQKLSFKNSPENRGKWCNVGFWKYSRHPNYFGEIFLWWGIFVAST 120
             W MW  G  IEA ADQQKLSFKNSPENRGKWC+VG WKYSRHPNYFGE+ LWWGIFVA++
Sbjct:   142 WTMWVFGFLIEAAADQQKLSFKNSPENRGKWCDVGVWKYSRHPNYFGEMLLWWGIFVAAS 201

Query:   121 PVLDGAEWXXXXXXXXXXXXXXXXXXXXXXEESADKKFGNMPAYRLYKKTTSPLIPLPPV 180
             PVL+GAE+                      E SADKK GN  AYR YKKTTSPLI  P  
Sbjct:   202 PVLEGAEYLVIFGPLFLTLLLLFVSGIPLLEASADKKHGNSGAYRSYKKTTSPLILFPRG 261

Query:   181 VYGNLPWWLKTI-LFELPLYSRNFPQEG 207
             VYGNLP W KT+ LFE P YSRN PQEG
Sbjct:   262 VYGNLPGWFKTVFLFEFPFYSRNLPQEG 289




GO:0005737 "cytoplasm" evidence=IEA
GO:0005739 "mitochondrion" evidence=ISM
GO:0006629 "lipid metabolic process" evidence=IEA
GO:0009507 "chloroplast" evidence=ISM
GO:0016021 "integral to membrane" evidence=IEA
GO:0016627 "oxidoreductase activity, acting on the CH-CH group of donors" evidence=IEA
GO:0005886 "plasma membrane" evidence=IDA
GO:0005773 "vacuole" evidence=IDA
GO:0005774 "vacuolar membrane" evidence=IDA
GO:0009506 "plasmodesma" evidence=IDA
GO:0005794 "Golgi apparatus" evidence=IDA
GO:0009627 "systemic acquired resistance" evidence=RCA
GO:0009744 "response to sucrose stimulus" evidence=RCA
GO:0009813 "flavonoid biosynthetic process" evidence=RCA
GO:0010224 "response to UV-B" evidence=RCA
GO:0031347 "regulation of defense response" evidence=RCA
GO:0005783 "endoplasmic reticulum" evidence=IDA
TAIR|locus:2194090 AT1G18180 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
FB|FBgn0035914 CG6282 [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-030131-3630 si:ch211-210c8.6 "si:ch211-210c8.6" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
UNIPROTKB|G4N6G0 MGG_03731 "Uncharacterized protein" [Magnaporthe oryzae 70-15 (taxid:242507)] Back     alignment and assigned GO terms
DICTYBASE|DDB_G0279829 DDB_G0279829 "DUF1295 family protein" [Dictyostelium discoideum (taxid:44689)] Back     alignment and assigned GO terms
UNIPROTKB|Q74AM9 GSU2323 "Uncharacterized protein" [Geobacter sulfurreducens PCA (taxid:243231)] Back     alignment and assigned GO terms
TIGR_CMR|GSU_2323 GSU_2323 "membrane protein, putative" [Geobacter sulfurreducens PCA (taxid:243231)] Back     alignment and assigned GO terms
UNIPROTKB|G4NC19 MGG_00459 "Uncharacterized protein" [Magnaporthe oryzae 70-15 (taxid:242507)] Back     alignment and assigned GO terms
UNIPROTKB|Q722V9 LMOf2365_0620 "Putative membrane protein" [Listeria monocytogenes serotype 4b str. F2365 (taxid:265669)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Your Input:
GSVIVG00017810001
SubName- Full=Chromosome chr17 scaffold_16, whole genome shotgun sequence; (292 aa)
(Vitis vinifera)
Predicted Functional Partners:
GSVIVG00032227001
SubName- Full=Chromosome chr4 scaffold_6, whole genome shotgun sequence; (355 aa)
      0.827
GSVIVG00020325001
SubName- Full=Chromosome chr5 scaffold_2, whole genome shotgun sequence; (351 aa)
      0.720
GSVIVG00020324001
SubName- Full=Chromosome chr5 scaffold_2, whole genome shotgun sequence; (316 aa)
      0.675
GSVIVG00028313001
SubName- Full=Chromosome chr10 scaffold_43, whole genome shotgun sequence; (311 aa)
      0.561
GSVIVG00000320001
SubName- Full=Chromosome chr9 scaffold_104, whole genome shotgun sequence; (382 aa)
       0.559
TIL
SubName- Full=Temperature-induced lipocalin (Putative uncharacterized protein) (Chromosome unde [...] (185 aa)
       0.472
GSVIVG00020327001
SubName- Full=Chromosome chr5 scaffold_2, whole genome shotgun sequence; (869 aa)
       0.440

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query209
pfam06966235 pfam06966, DUF1295, Protein of unknown function (D 7e-75
COG3752272 COG3752, COG3752, Steroid 5-alpha reductase family 9e-34
COG2020187 COG2020, STE14, Putative protein-S-isoprenylcystei 0.004
>gnl|CDD|219244 pfam06966, DUF1295, Protein of unknown function (DUF1295) Back     alignment and domain information
 Score =  225 bits (575), Expect = 7e-75
 Identities = 91/175 (52%), Positives = 120/175 (68%), Gaps = 6/175 (3%)

Query: 3   RILNWGEDRRFDEMRSNLGK------LAIFWIFQAVWVWTVSLPVTVVNASDRDPSVQAV 56
           R   WGED R+ ++R N GK      L IF+I QAV ++ VSLPV + NAS  +P++ A 
Sbjct: 61  RTWGWGEDYRYVDLRKNWGKWPYLLSLLIFFILQAVLLYIVSLPVYLANASGPNPALGAW 120

Query: 57  DVIGWIMWSVGVSIEAIADQQKLSFKNSPENRGKWCNVGFWKYSRHPNYFGEIFLWWGIF 116
           D+IG  +W VG+  EA+ADQQ  +FK  P N+GK C+ G W+YSRHPNYFGE  +WWGIF
Sbjct: 121 DIIGIAIWLVGIGFEALADQQLWAFKGDPANKGKVCDTGLWRYSRHPNYFGEALIWWGIF 180

Query: 117 VASTPVLDGAEWLVILGPIFLTLLLLFISGIPLLEESADKKFGNMPAYRLYKKTT 171
           + +  VL G EW  I GP+ +TLLL+F+SGIPLLE S  KK+G+   YR Y++ T
Sbjct: 181 LIAINVLSGLEWWTIAGPLLMTLLLVFVSGIPLLEASMLKKYGDREDYRAYQRRT 235


This family contains a number of bacterial and eukaryotic proteins of unknown function that are approximately 300 residues long. Length = 235

>gnl|CDD|226275 COG3752, COG3752, Steroid 5-alpha reductase family enzyme [General function prediction only] Back     alignment and domain information
>gnl|CDD|224931 COG2020, STE14, Putative protein-S-isoprenylcysteine methyltransferase [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 209
PF06966235 DUF1295: Protein of unknown function (DUF1295); In 100.0
COG3752272 Steroid 5-alpha reductase family enzyme [General f 100.0
KOG4650311 consensus Predicted steroid reductase [General fun 100.0
PF01222432 ERG4_ERG24: Ergosterol biosynthesis ERG4/ERG24 fam 99.89
COG2020187 STE14 Putative protein-S-isoprenylcysteine methylt 99.86
KOG1435428 consensus Sterol reductase/lamin B receptor [Lipid 99.84
PF04191106 PEMT: Phospholipid methyltransferase ; InterPro: I 99.7
KOG2628201 consensus Farnesyl cysteine-carboxyl methyltransfe 99.68
PF0414094 ICMT: Isoprenylcysteine carboxyl methyltransferase 99.52
KOG1638257 consensus Steroid reductase [Lipid transport and m 99.48
PLN02392260 probable steroid reductase DET2 99.47
PF02544150 Steroid_dh: 3-oxo-5-alpha-steroid 4-dehydrogenase 99.4
PLN02560308 enoyl-CoA reductase 99.28
PLN03164323 3-oxo-5-alpha-steroid 4-dehydrogenase, C-terminal 99.18
COG1755172 Uncharacterized protein conserved in bacteria [Fun 99.16
KOG1640304 consensus Predicted steroid reductase [Lipid trans 98.09
KOG1639297 consensus Steroid reductase required for elongatio 97.87
PF07298191 NnrU: NnrU protein; InterPro: IPR009915 This famil 97.59
PLN02797164 phosphatidyl-N-dimethylethanolamine N-methyltransf 93.4
KOG4142208 consensus Phospholipid methyltransferase [Lipid tr 90.37
COG4094219 Predicted membrane protein [Function unknown] 88.5
>PF06966 DUF1295: Protein of unknown function (DUF1295); InterPro: IPR010721 This family contains a number of bacterial and eukaryotic proteins of unknown function that are approximately 300 residues long Back     alignment and domain information
Probab=100.00  E-value=1.3e-45  Score=313.10  Aligned_cols=170  Identities=49%  Similarity=1.047  Sum_probs=155.0

Q ss_pred             ccccCcCCCccHHHHHHhhh------HHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCcHHHHHHHHHHHHHHHHHHHHH
Q 028414            2 ARILNWGEDRRFDEMRSNLG------KLAIFWIFQAVWVWTVSLPVTVVNASDRDPSVQAVDVIGWIMWSVGVSIEAIAD   75 (209)
Q Consensus         2 ~r~~~~geD~R~~~~r~~~~------~~~~~~~~Q~~~~~~~~lP~~~~~~~~~~~~~~~~~~~g~~l~~~G~~l~~~ad   75 (209)
                      .|..++|||+||+++|++++      .++.+|++|+++++++++|+++++..+.+++++..+++|++++++|+++|++||
T Consensus        60 ~R~~~~~eD~R~~~~r~~~~~~~~~~~~~~~~~~q~~~~~~~~lP~~~~~~~~~~~~~~~~~~~g~~l~~~g~~~E~~AD  139 (235)
T PF06966_consen   60 RRNLGWGEDWRYDDLRKKWGEWFWPFSFFFIFLFQALLVWLISLPVYLANSSPPNPPLNWLDILGIALFLIGFLLETVAD  139 (235)
T ss_pred             HHhCCCCCchhHHHHHHhcCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCcchHHHHHHHHHHHHHHHHHHHHH
Confidence            58888899999999999974      466789999999999999999887655556789999999999999999999999


Q ss_pred             HHHHhcCCCCCCCCcccccCccccccCchhHHHHHHHHHHHHHhhcccCchhHHHHHHHHHHHHHHHHHhChHHHHHHHH
Q 028414           76 QQKLSFKNSPENRGKWCNVGFWKYSRHPNYFGEIFLWWGIFVASTPVLDGAEWLVILGPIFLTLLLLFISGIPLLEESAD  155 (209)
Q Consensus        76 ~ql~~f~~~~~~~~~lit~Gly~~~RHPnY~ge~l~w~g~~l~~~~~~~~~~~~~~~~~i~~~~ll~~~s~i~~eE~~l~  155 (209)
                      .||.+||++|+|++++|++|+|++||||||+||+++|+|+++++.+...+..++++++|++++++++++++++..|+++.
T Consensus       140 ~Q~~~fk~~~~n~g~~~~~GLw~~sRHPNYfGE~l~W~g~~~~a~~~~~~~~~~~~~~pl~~~~~l~~~sgip~~E~~~~  219 (235)
T PF06966_consen  140 QQKYRFKKDPANKGKFCTTGLWRYSRHPNYFGEILFWWGIYLAAISSGSGWLWWAIIGPLFMTLLLLFVSGIPLLEKRMA  219 (235)
T ss_pred             HHHHHHhhCcccCCccccCCeeeeeeCchHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHcCchHHHHHHH
Confidence            99999999999999999999999999999999999999999998876544446788999998888889999999999999


Q ss_pred             hHcCCcHHHHHHHhhC
Q 028414          156 KKFGNMPAYRLYKKTT  171 (209)
Q Consensus       156 ~kyG~~~~Y~~Y~~~t  171 (209)
                      +|||++|+|+||+|+|
T Consensus       220 ~kyg~~~~Y~~Y~~~t  235 (235)
T PF06966_consen  220 KKYGDRPAYQEYQRRT  235 (235)
T ss_pred             HhcCCCHhHHHHHhcC
Confidence            9999999999999997



>COG3752 Steroid 5-alpha reductase family enzyme [General function prediction only] Back     alignment and domain information
>KOG4650 consensus Predicted steroid reductase [General function prediction only] Back     alignment and domain information
>PF01222 ERG4_ERG24: Ergosterol biosynthesis ERG4/ERG24 family; InterPro: IPR001171 The two fungal enzymes, C-14 sterol reductase (gene ERG24 in budding yeast and erg3 in Neurospora crassa) and C-24(28) sterol reductase (gene ERG4 in budding yeast and sts1 in fission yeast), are involved in ergosterol biosynthesis Back     alignment and domain information
>COG2020 STE14 Putative protein-S-isoprenylcysteine methyltransferase [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>KOG1435 consensus Sterol reductase/lamin B receptor [Lipid transport and metabolism; Signal transduction mechanisms] Back     alignment and domain information
>PF04191 PEMT: Phospholipid methyltransferase ; InterPro: IPR007318 The Saccharomyces cerevisiae (Baker's yeast) phospholipid methyltransferase (2 Back     alignment and domain information
>KOG2628 consensus Farnesyl cysteine-carboxyl methyltransferase [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PF04140 ICMT: Isoprenylcysteine carboxyl methyltransferase (ICMT) family ; InterPro: IPR007269 The isoprenylcysteine o-methyltransferase (2 Back     alignment and domain information
>KOG1638 consensus Steroid reductase [Lipid transport and metabolism] Back     alignment and domain information
>PLN02392 probable steroid reductase DET2 Back     alignment and domain information
>PF02544 Steroid_dh: 3-oxo-5-alpha-steroid 4-dehydrogenase ; InterPro: IPR001104 Synonym(s): Steroid 5-alpha-reductase 3-oxo-5-alpha-steroid 4-dehydrogenases, 1 Back     alignment and domain information
>PLN02560 enoyl-CoA reductase Back     alignment and domain information
>PLN03164 3-oxo-5-alpha-steroid 4-dehydrogenase, C-terminal domain containing protein; Provisional Back     alignment and domain information
>COG1755 Uncharacterized protein conserved in bacteria [Function unknown] Back     alignment and domain information
>KOG1640 consensus Predicted steroid reductase [Lipid transport and metabolism] Back     alignment and domain information
>KOG1639 consensus Steroid reductase required for elongation of the very long chain fatty acids [Lipid transport and metabolism] Back     alignment and domain information
>PF07298 NnrU: NnrU protein; InterPro: IPR009915 This family consists of several plant and bacterial NnrU proteins Back     alignment and domain information
>PLN02797 phosphatidyl-N-dimethylethanolamine N-methyltransferase Back     alignment and domain information
>KOG4142 consensus Phospholipid methyltransferase [Lipid transport and metabolism] Back     alignment and domain information
>COG4094 Predicted membrane protein [Function unknown] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query209
4a2n_B194 Isoprenylcysteine carboxyl methyltransferase; memb 2e-06
>4a2n_B Isoprenylcysteine carboxyl methyltransferase; membrane protein, RAS and RHO gtpases signallin; HET: SAH PLM CDL; 3.40A {Methanosarcina acetivorans} Length = 194 Back     alignment and structure
 Score = 45.7 bits (108), Expect = 2e-06
 Identities = 28/170 (16%), Positives = 56/170 (32%), Gaps = 12/170 (7%)

Query: 10  DRRFDEMRSNLGKLAIFWIFQAVWVWTVSLPVTVVNASDRDPSVQAVDVIGWIMWSVGVS 69
           ++   ++R N  K  +F  F  +    ++   +    S       ++ +   I+  + + 
Sbjct: 31  NKSKKKVRPNFEKSLVFLNFIGMVFLPLTAVFSSYLDSFNINLPDSIRLFALIVTFLNIG 90

Query: 70  IEAIADQQ---KLSFKNSPENRGKWCNVGFWKYSRHPNYFGEIFLWWGIFVASTPVLDGA 126
           +     +      S     ++  K    G +K  RHP Y           +         
Sbjct: 91  LFTKIHKDLGNNWSAILEIKDGHKLVKEGIYKNIRHPMYAHLWLWVITQGIIL-----SN 145

Query: 127 EWLVILGPIFLTLLLLFISGIPLLEESADKKFGNMPAYRLYKKTTSPLIP 176
             ++I G +   +L      +P  EE   ++FG    Y  Y   T  L P
Sbjct: 146 WVVLIFGIVAWAILYFIR--VPKEEELLIEEFG--DEYIEYMGKTGRLFP 191


Structure Templates Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query209
4a2n_B194 Isoprenylcysteine carboxyl methyltransferase; memb 99.94
>4a2n_B Isoprenylcysteine carboxyl methyltransferase; membrane protein, RAS and RHO gtpases signallin; HET: SAH PLM CDL; 3.40A {Methanosarcina acetivorans} Back     alignment and structure
Probab=99.94  E-value=5.1e-26  Score=186.90  Aligned_cols=116  Identities=19%  Similarity=0.301  Sum_probs=93.0

Q ss_pred             CcHHHHHHHHHHHHHHHHHHHHHHHHHh-cCC--CCCCCCcccccCccccccCchhHHHHHHHHHHHHHhhcccCchhHH
Q 028414           53 VQAVDVIGWIMWSVGVSIEAIADQQKLS-FKN--SPENRGKWCNVGFWKYSRHPNYFGEIFLWWGIFVASTPVLDGAEWL  129 (209)
Q Consensus        53 ~~~~~~~g~~l~~~G~~l~~~ad~ql~~-f~~--~~~~~~~lit~Gly~~~RHPnY~ge~l~w~g~~l~~~~~~~~~~~~  129 (209)
                      ..+..++|++++++|++++..|+.|+++ |+.  +++++++++|+|+|++||||||+|+++.|+|+++...+      ++
T Consensus        74 p~~~~~~G~~l~l~G~~l~~~a~~~Lg~~f~~~~~~~~~~~Lvt~G~y~~vRHP~Y~G~~l~~~g~~l~~~s------~~  147 (194)
T 4a2n_B           74 PDSIRLFALIVTFLNIGLFTKIHKDLGNNWSAILEIKDGHKLVKEGIYKNIRHPMYAHLWLWVITQGIILSN------WV  147 (194)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHHHHGGGCCSSCCEETTCCCCCSSTTTTBSSHHHHHHHHHHHHHHHHHTC------HH
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCCCCCCeeeecCcchhccCccHHHHHHHHHHHHHHhcc------HH
Confidence            3567899999999999999999999865 443  34567889999999999999999999999998876422      33


Q ss_pred             HHH-HHHHHHHHHHHHhChHHHHHHHHhHcCCcHHHHHHHhhCCCcccCC
Q 028414          130 VIL-GPIFLTLLLLFISGIPLLEESADKKFGNMPAYRLYKKTTSPLIPLP  178 (209)
Q Consensus       130 ~~~-~~i~~~~ll~~~s~i~~eE~~l~~kyG~~~~Y~~Y~~~t~~~iP~~  178 (209)
                      +++ .++.++++  +..+++.||+.+.++||  ++|++|+++||++||++
T Consensus       148 ~~~~~~~~~~~~--~~~ri~~EE~~L~~~fG--~~Y~~Y~~rv~r~iP~i  193 (194)
T 4a2n_B          148 VLIFGIVAWAIL--YFIRVPKEEELLIEEFG--DEYIEYMGKTGRLFPKV  193 (194)
T ss_dssp             HHHHHHHHHHHH--HHHHHHHHHHHHHHHHT--HHHHHHHHHCBSSSCC-
T ss_pred             HHHHHHHHHHHH--HHHHHHHHHHHHHHHhC--HHHHHHHHhCCeeCcee
Confidence            333 23332222  33578999999999999  99999999999999985




Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

No hit with probability above 80.00