Citrus Sinensis ID: 028415

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------21
MGSGAVLGLAPAPEYTFLIYVSPVGNYFKEGIAPINLVVEHELHRATPGGTGGVKTIGNYAAVLKAQSAAKAKGYSDVLYLDCVHKRYLEEVSSCNIFVVKGNVISTPAIKGTILPGITRKSIIDVAQSQGFQVEERLVTVEELLDADEVFCTGTAVVVSPVGSITYLGKRVSYGEGGFGAVSQQLYSVLTQLQMGLIADKMNWTLELS
ccccccccccccccEEEEEEEEccccccccccccEEEEEEccEEEccccccccccccccHHHHHHHHHHHHHccccEEEEEEcccccEEEEEccEEEEEEEccEEEcccccccccccccHHHHHHHHHHcccEEEEEEEcHHHcccccEEcccccEEEEcccEEEEEccEEEEEccccccHHHHHHHHHHHHHcccccccccccEEEcc
ccccccccccccccEEEEEEEccccHHcccccccEEEEEEccEEEEccccccccccccHHHHHHHHHHHHHHccccEEEEEcccEcEEEEEEcccEEEEEEccEEEEccHHHcccccHHHHHHHHHHHHccccEEEcccEccHHHHccEEEEEEcccEEEEEEEEEEcccEEEEccccccHHHHHHHHHHHccHccccccccccEEEEc
mgsgavlglapapeytFLIYVspvgnyfkegiapINLVVEhelhratpggtggvkTIGNYAAVLKAQSAAKakgysdvlyLDCVHKRYLEEVSSCNIFVvkgnvistpaikgtilpgitrKSIIDVAqsqgfqveERLVTVEELLdadevfctgtavvvspvgsitylgkrvsygeggfgaVSQQLYSVLTQLQMGLIADKMNWTLELS
MGSGAVLGLAPAPEYTFLIYVSPVGNYFKEGIAPINLVVEHELHRATPGGTGGVKTIGNYAAVLKAQSAAKAKGYSDVLYLDCVHKRYLEEVSSCNIFvvkgnvistpaikgtilpgiTRKSIIDVAQSQGFQVEERLVTVEELLDADEVFCTGTAVVVSPVGSITYLGKRVSYGEGGFGAVSQQLYSVLTQLQMGLIADKMNWTLELS
MGSGAVLGLAPAPEYTFLIYVSPVGNYFKEGIAPINLVVEHELHRATPGGTGGVKTIGNYaavlkaqsaakakGYSDVLYLDCVHKRYLEEVSSCNIFVVKGNVISTPAIKGTILPGITRKSIIDVAQSQGFQveerlvtveellDADEVFCTGTAVVVSPVGSITYLGKRVSYGEGGFGAVSQQLYSVLTQLQMGLIADKMNWTLELS
*****VLGLAPAPEYTFLIYVSPVGNYFKEGIAPINLVVEHELHRATPGGTGGVKTIGNYAAVLKAQSAAKAKGYSDVLYLDCVHKRYLEEVSSCNIFVVKGNVISTPAIKGTILPGITRKSIIDVAQSQGFQVEERLVTVEELLDADEVFCTGTAVVVSPVGSITYLGKRVSYGEGGFGAVSQQLYSVLTQLQMGLIADKMNWTL***
MGSGAVLGLAPAPEYTFLIYVSPVGNYFKEGIAPINLVVEHELHRATPGGTGGVKTIGNYAAVLKAQSAAKAKGYSDVLYLDCVHKRYLEEVSSCNIFVVKGNVISTPAIKGTILPGITRKSIIDVAQSQGFQVEERLVTVEELLDADEVFCTGTAVVVSPVGSITYLGKRVSYGEGGFGAVSQQLYSVLTQLQMGLIADKMNWTLELS
MGSGAVLGLAPAPEYTFLIYVSPVGNYFKEGIAPINLVVEHELHRATPGGTGGVKTIGNYAAVLKAQSAAKAKGYSDVLYLDCVHKRYLEEVSSCNIFVVKGNVISTPAIKGTILPGITRKSIIDVAQSQGFQVEERLVTVEELLDADEVFCTGTAVVVSPVGSITYLGKRVSYGEGGFGAVSQQLYSVLTQLQMGLIADKMNWTLELS
****AVLGLAPAPEYTFLIYVSPVGNYFKEGIAPINLVVEHELHRATPGGTGGVKTIGNYAAVLKAQSAAKAKGYSDVLYLDCVHKRYLEEVSSCNIFVVKGNVISTPAIKGTILPGITRKSIIDVAQSQGFQVEERLVTVEELLDADEVFCTGTAVVVSPVGSITYLGKRVSYGEGGFGAVSQQLYSVLTQLQMGLIADKMNWTLELS
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MGSGAVLGLAPAPEYTFLIYVSPVGNYFKEGIAPINLVVEHELHRATPGGTGGVKTIGNYAAVLKAQSAAKAKGYSDVLYLDCVHKRYLEEVSSCNIFVVKGNVISTPAIKGTILPGITRKSIIDVAQSQGFQVEERLVTVEELLDADEVFCTGTAVVVSPVGSITYLGKRVSYGEGGFGAVSQQLYSVLTQLQMGLIADKMNWTLELS
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query209 2.2.26 [Sep-21-2011]
Q9M401413 Branched-chain-amino-acid yes no 1.0 0.506 0.856 1e-103
Q9FYA6415 Branched-chain-amino-acid no no 1.0 0.503 0.837 1e-101
Q9M439388 Branched-chain-amino-acid no no 0.995 0.536 0.645 1e-73
Q9LPM9356 Branched-chain-amino-acid no no 0.990 0.581 0.559 4e-63
Q9LPM8367 Putative branched-chain-a no no 0.990 0.564 0.545 2e-60
Q93Y32384 Branched-chain-amino-acid no no 0.995 0.541 0.574 1e-58
Q9LE06354 Methionine aminotransfera no no 0.990 0.584 0.430 1e-48
P39576363 Branched-chain-amino-acid yes no 0.971 0.559 0.454 1e-47
Q6GJB4358 Probable branched-chain-a yes no 0.961 0.561 0.442 6e-43
P63513358 Probable branched-chain-a yes no 0.956 0.558 0.439 1e-42
>sp|Q9M401|BCAT3_ARATH Branched-chain-amino-acid aminotransferase 3, chloroplastic OS=Arabidopsis thaliana GN=BCAT3 PE=1 SV=1 Back     alignment and function desciption
 Score =  375 bits (962), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 179/209 (85%), Positives = 196/209 (93%)

Query: 1   MGSGAVLGLAPAPEYTFLIYVSPVGNYFKEGIAPINLVVEHELHRATPGGTGGVKTIGNY 60
           MG+GAVLGLAPAPEYTF+IYVSPVGNYFKEG+APINL+VE+E HRATPGGTGGVKTIGNY
Sbjct: 205 MGTGAVLGLAPAPEYTFIIYVSPVGNYFKEGVAPINLIVENEFHRATPGGTGGVKTIGNY 264

Query: 61  AAVLKAQSAAKAKGYSDVLYLDCVHKRYLEEVSSCNIFVVKGNVISTPAIKGTILPGITR 120
           AAVLKAQS AKAKGYSDVLYLDC++KRYLEEVSSCNIF+VK NVISTP IKGTILPGITR
Sbjct: 265 AAVLKAQSIAKAKGYSDVLYLDCIYKRYLEEVSSCNIFIVKDNVISTPEIKGTILPGITR 324

Query: 121 KSIIDVAQSQGFQVEERLVTVEELLDADEVFCTGTAVVVSPVGSITYLGKRVSYGEGGFG 180
           KS+IDVA++QGFQVEER VTV+ELL+ADEVFCTGTAVVVSPVGS+TY GKRVSYGEG FG
Sbjct: 325 KSMIDVARTQGFQVEERNVTVDELLEADEVFCTGTAVVVSPVGSVTYKGKRVSYGEGTFG 384

Query: 181 AVSQQLYSVLTQLQMGLIADKMNWTLELS 209
            VS+QLY+VLT LQMGLI D M WT+ LS
Sbjct: 385 TVSKQLYTVLTSLQMGLIEDNMKWTVNLS 413
Converts 2-oxo acids to branched-chain amino acids. Acts on leucine, isoleucine and valine.
Arabidopsis thaliana (taxid: 3702)
EC: 2EC: .EC: 6EC: .EC: 1EC: .EC: 4EC: 2
>sp|Q9FYA6|BCAT5_ARATH Branched-chain-amino-acid aminotransferase 5, chloroplastic OS=Arabidopsis thaliana GN=BCAT5 PE=1 SV=1 Back     alignment and function description
>sp|Q9M439|BCAT2_ARATH Branched-chain-amino-acid aminotransferase 2, chloroplastic OS=Arabidopsis thaliana GN=BCAT2 PE=1 SV=1 Back     alignment and function description
>sp|Q9LPM9|BCAT6_ARATH Branched-chain-amino-acid aminotransferase 6 OS=Arabidopsis thaliana GN=BCAT6 PE=1 SV=1 Back     alignment and function description
>sp|Q9LPM8|BCAT7_ARATH Putative branched-chain-amino-acid aminotransferase 7 OS=Arabidopsis thaliana GN=BCAT7 PE=5 SV=1 Back     alignment and function description
>sp|Q93Y32|BCAT1_ARATH Branched-chain-amino-acid aminotransferase 1, mitochondrial OS=Arabidopsis thaliana GN=BCAT1 PE=1 SV=2 Back     alignment and function description
>sp|Q9LE06|BCAT4_ARATH Methionine aminotransferase BCAT4 OS=Arabidopsis thaliana GN=BCAT4 PE=1 SV=1 Back     alignment and function description
>sp|P39576|ILVE2_BACSU Branched-chain-amino-acid aminotransferase 2 OS=Bacillus subtilis (strain 168) GN=ilvK PE=1 SV=5 Back     alignment and function description
>sp|Q6GJB4|ILVE_STAAR Probable branched-chain-amino-acid aminotransferase OS=Staphylococcus aureus (strain MRSA252) GN=ilvE PE=3 SV=1 Back     alignment and function description
>sp|P63513|ILVE_STAAW Probable branched-chain-amino-acid aminotransferase OS=Staphylococcus aureus (strain MW2) GN=ilvE PE=3 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query209
255579513 417 branched-chain amino acid aminotransfera 1.0 0.501 0.885 1e-105
449451331 405 PREDICTED: branched-chain-amino-acid ami 0.995 0.513 0.899 1e-105
363807226 412 uncharacterized protein LOC100798328 [Gl 0.990 0.502 0.899 1e-104
356497021 406 PREDICTED: branched-chain-amino-acid ami 0.990 0.509 0.884 1e-103
357482487 408 Branched-chain-amino-acid aminotransfera 0.990 0.507 0.894 1e-103
255689399 329 branched-chain amino acid aminotransfera 0.990 0.629 0.884 1e-102
186510845 411 branched-chain-amino-acid aminotransfera 1.0 0.508 0.856 1e-102
407317195 408 plastid branched-chain aminotransferase 1.0 0.512 0.875 1e-102
18408919 413 branched-chain-amino-acid aminotransfera 1.0 0.506 0.856 1e-102
297816214 418 ATBCAT-3 [Arabidopsis lyrata subsp. lyra 1.0 0.5 0.861 1e-102
>gi|255579513|ref|XP_002530599.1| branched-chain amino acid aminotransferase, putative [Ricinus communis] gi|223529847|gb|EEF31779.1| branched-chain amino acid aminotransferase, putative [Ricinus communis] Back     alignment and taxonomy information
 Score =  387 bits (995), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 185/209 (88%), Positives = 199/209 (95%)

Query: 1   MGSGAVLGLAPAPEYTFLIYVSPVGNYFKEGIAPINLVVEHELHRATPGGTGGVKTIGNY 60
           MGSGAVLGLAPAPEYTFLIYVSPVGNYFKEG+A INL+VEHELHRATPGGTG VKTIGNY
Sbjct: 209 MGSGAVLGLAPAPEYTFLIYVSPVGNYFKEGVAAINLIVEHELHRATPGGTGSVKTIGNY 268

Query: 61  AAVLKAQSAAKAKGYSDVLYLDCVHKRYLEEVSSCNIFVVKGNVISTPAIKGTILPGITR 120
           AAVLKAQS AKAKGYSDVLYLDCVHK+YLEEVSSCNIF+VK  VISTPA+KGTILPGITR
Sbjct: 269 AAVLKAQSVAKAKGYSDVLYLDCVHKKYLEEVSSCNIFIVKDKVISTPAVKGTILPGITR 328

Query: 121 KSIIDVAQSQGFQVEERLVTVEELLDADEVFCTGTAVVVSPVGSITYLGKRVSYGEGGFG 180
           KSIIDVA+SQGFQVEER V V+ELLDADEVFCTGTAVVVSPVGSITY+G+RVSYGE GFG
Sbjct: 329 KSIIDVARSQGFQVEERPVAVDELLDADEVFCTGTAVVVSPVGSITYMGRRVSYGESGFG 388

Query: 181 AVSQQLYSVLTQLQMGLIADKMNWTLELS 209
           AVSQQLY+VLT+LQMGL  D+MNWT+EL+
Sbjct: 389 AVSQQLYTVLTRLQMGLTEDRMNWTIELN 417

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|449451331|ref|XP_004143415.1| PREDICTED: branched-chain-amino-acid aminotransferase 3, chloroplastic-like [Cucumis sativus] gi|449519406|ref|XP_004166726.1| PREDICTED: branched-chain-amino-acid aminotransferase 3, chloroplastic-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|363807226|ref|NP_001242355.1| uncharacterized protein LOC100798328 [Glycine max] gi|255635824|gb|ACU18260.1| unknown [Glycine max] Back     alignment and taxonomy information
>gi|356497021|ref|XP_003517363.1| PREDICTED: branched-chain-amino-acid aminotransferase 3, chloroplastic-like [Glycine max] Back     alignment and taxonomy information
>gi|357482487|ref|XP_003611530.1| Branched-chain-amino-acid aminotransferase [Medicago truncatula] gi|355512865|gb|AES94488.1| Branched-chain-amino-acid aminotransferase [Medicago truncatula] Back     alignment and taxonomy information
>gi|255689399|gb|ACU30051.1| branched-chain amino acid aminotransferase, partial [Glycine max] Back     alignment and taxonomy information
>gi|186510845|ref|NP_001118802.1| branched-chain-amino-acid aminotransferase 3 [Arabidopsis thaliana] gi|332645055|gb|AEE78576.1| branched-chain-amino-acid aminotransferase 3 [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|407317195|gb|AFU07635.1| plastid branched-chain aminotransferase 2 [Humulus lupulus] Back     alignment and taxonomy information
>gi|18408919|ref|NP_566923.1| branched-chain-amino-acid aminotransferase 3 [Arabidopsis thaliana] gi|26391676|sp|Q9M401.1|BCAT3_ARATH RecName: Full=Branched-chain-amino-acid aminotransferase 3, chloroplastic; Short=Atbcat-3; Flags: Precursor gi|17933292|gb|AAL48229.1|AF446355_1 AT3g49680/T16K5_30 [Arabidopsis thaliana] gi|8249010|emb|CAB93131.1| branched-chain amino acid transaminase 3 [Arabidopsis thaliana] gi|20453389|gb|AAM19933.1| AT3g49680/T16K5_30 [Arabidopsis thaliana] gi|332645054|gb|AEE78575.1| branched-chain-amino-acid aminotransferase 3 [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|297816214|ref|XP_002875990.1| ATBCAT-3 [Arabidopsis lyrata subsp. lyrata] gi|297321828|gb|EFH52249.1| ATBCAT-3 [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query209
TAIR|locus:2097320413 BCAT3 "branched-chain aminotra 1.0 0.506 0.751 3.6e-82
TAIR|locus:2201921388 BCAT-2 "branched-chain amino a 0.995 0.536 0.583 1.9e-60
TAIR|locus:2031030356 AT1G50110 [Arabidopsis thalian 0.985 0.578 0.5 1.2e-51
TAIR|locus:2031040367 BCAT7 "branched-chain amino ac 0.985 0.561 0.495 9.5e-50
TAIR|locus:2201931384 BCAT-1 "branched-chain amino a 0.990 0.539 0.514 9.8e-48
TAIR|locus:2091216354 BCAT4 "branched-chain aminotra 0.980 0.579 0.396 2e-40
TIGR_CMR|GSU_0656357 GSU_0656 "branched-chain amino 0.971 0.568 0.392 8.9e-38
UNIPROTKB|Q10399368 ilvE "Branched-chain-amino-aci 0.966 0.548 0.367 8.8e-31
UNIPROTKB|A0R066368 ilvE "Branched-chain-amino-aci 0.971 0.551 0.347 1.1e-30
TIGR_CMR|SO_0340363 SO_0340 "branched-chain amino 0.942 0.542 0.318 2.1e-22
TAIR|locus:2097320 BCAT3 "branched-chain aminotransferase 3" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 824 (295.1 bits), Expect = 3.6e-82, P = 3.6e-82
 Identities = 157/209 (75%), Positives = 173/209 (82%)

Query:     1 MGSGAVLGLAPAPEYTFLIYVSPVGNYFKEGIAPINLVVEHELHRATPGGTGGVKTIGNY 60
             MG+GAVLGLAPAPEYTF+IYVSPVGNYFKEG+APINL+VE+E HRATPGGTGGVKTIGNY
Sbjct:   205 MGTGAVLGLAPAPEYTFIIYVSPVGNYFKEGVAPINLIVENEFHRATPGGTGGVKTIGNY 264

Query:    61 XXXXXXXXXXXXXGYSDVLYLDCVHKRYLEEVSSCNIFVVKGNVISTPAIKGTILPGITR 120
                          GYSDVLYLDC++KRYLEEVSSCNIF+VK NVISTP IKGTILPGITR
Sbjct:   265 AAVLKAQSIAKAKGYSDVLYLDCIYKRYLEEVSSCNIFIVKDNVISTPEIKGTILPGITR 324

Query:   121 KSIIDVAQSQGFQXXXXXXXXXXXXDADEVFCTGTAVVVSPVGSITYLGKRVSYGEGGFG 180
             KS+IDVA++QGFQ            +ADEVFCTGTAVVVSPVGS+TY GKRVSYGEG FG
Sbjct:   325 KSMIDVARTQGFQVEERNVTVDELLEADEVFCTGTAVVVSPVGSVTYKGKRVSYGEGTFG 384

Query:   181 AVSQQLYSVLTQLQMGLIADKMNWTLELS 209
              VS+QLY+VLT LQMGLI D M WT+ LS
Sbjct:   385 TVSKQLYTVLTSLQMGLIEDNMKWTVNLS 413
GO:0003824 "catalytic activity" evidence=IEA;ISS
GO:0004084 "branched-chain-amino-acid transaminase activity" evidence=IEA;IGI
GO:0008152 "metabolic process" evidence=IEA
GO:0009081 "branched-chain amino acid metabolic process" evidence=IEA
GO:0009507 "chloroplast" evidence=ISM;IDA
GO:0009570 "chloroplast stroma" evidence=IDA
GO:0005829 "cytosol" evidence=RCA
GO:0009407 "toxin catabolic process" evidence=RCA
GO:0019932 "second-messenger-mediated signaling" evidence=RCA
TAIR|locus:2201921 BCAT-2 "branched-chain amino acid transaminase 2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2031030 AT1G50110 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2031040 BCAT7 "branched-chain amino acid transaminase 7" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2201931 BCAT-1 "branched-chain amino acid transaminase 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2091216 BCAT4 "branched-chain aminotransferase4" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TIGR_CMR|GSU_0656 GSU_0656 "branched-chain amino acid aminotransferase" [Geobacter sulfurreducens PCA (taxid:243231)] Back     alignment and assigned GO terms
UNIPROTKB|Q10399 ilvE "Branched-chain-amino-acid aminotransferase" [Mycobacterium tuberculosis (taxid:1773)] Back     alignment and assigned GO terms
UNIPROTKB|A0R066 ilvE "Branched-chain-amino-acid aminotransferase" [Mycobacterium smegmatis str. MC2 155 (taxid:246196)] Back     alignment and assigned GO terms
TIGR_CMR|SO_0340 SO_0340 "branched-chain amino acid aminotransferase" [Shewanella oneidensis MR-1 (taxid:211586)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q9M401BCAT3_ARATH2, ., 6, ., 1, ., 4, 20.85641.00.5060yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer2.6.10.921
4th Layer2.6.1.420.914

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
gw1.VII.52.1
branched-chain amino acid aminotransferase (EC-2.6.1.42) (338 aa)
(Populus trichocarpa)
Predicted Functional Partners:
gw1.V.3049.1
2-isopropylmalate synthase (EC-2.3.3.13) (545 aa)
•    •• 0.976
estExt_fgenesh4_pm.C_LG_III0598
hypothetical protein (605 aa)
•  •••• 0.967
estExt_fgenesh4_pg.C_LG_I0451
hypothetical protein (611 aa)
•  •••• 0.967
gw1.XI.1444.1
aminoacyl-tRNA ligase (EC-6.1.1.4) (889 aa)
     •• 0.929
fgenesh4_pg.C_LG_II002297
aminoacyl-tRNA ligase (EC-6.1.1.9) (951 aa)
     •• 0.919
estExt_fgenesh4_pg.C_LG_VII1280
SubName- Full=Putative uncharacterized protein; (1054 aa)
     •• 0.907
gw1.X.4012.1
isoleucyl-tRNA synthetase (1029 aa)
     •• 0.907
eugene3.00050267
aminoacyl-tRNA ligase (EC-6.1.1.9) (1046 aa)
     •• 0.906
gw1.III.165.1
hypothetical protein (320 aa)
     •  0.902
eugene3.00860050
aminoacyl-tRNA ligase (EC-6.1.1.4) (1087 aa)
   • •• 0.902

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query209
PLN02782403 PLN02782, PLN02782, Branched-chain amino acid amin 1e-160
PRK13357356 PRK13357, PRK13357, branched-chain amino acid amin 4e-93
PLN02259388 PLN02259, PLN02259, branched-chain-amino-acid amin 3e-89
PLN03117355 PLN03117, PLN03117, Branched-chain-amino-acid amin 3e-85
cd01557279 cd01557, BCAT_beta_family, BCAT_beta_family: Branc 3e-80
PLN02883384 PLN02883, PLN02883, Branched-chain amino acid amin 7e-72
TIGR01123313 TIGR01123, ilvE_II, branched-chain amino acid amin 6e-69
cd00449256 cd00449, PLPDE_IV, PyridoxaL 5'-Phosphate Dependen 9e-60
COG0115284 COG0115, IlvE, Branched-chain amino acid aminotran 2e-49
pfam01063231 pfam01063, Aminotran_4, Aminotransferase class IV 3e-35
PRK06606306 PRK06606, PRK06606, branched-chain amino acid amin 2e-30
cd01558270 cd01558, D-AAT_like, D-Alanine aminotransferase (D 6e-27
TIGR01122298 TIGR01122, ilvE_I, branched-chain amino acid amino 2e-26
PRK07544292 PRK07544, PRK07544, branched-chain amino acid amin 1e-23
PRK08320288 PRK08320, PRK08320, branched-chain amino acid amin 8e-21
PRK06680286 PRK06680, PRK06680, D-amino acid aminotransferase; 8e-20
PRK13356286 PRK13356, PRK13356, aminotransferase; Provisional 4e-19
cd01559249 cd01559, ADCL_like, ADCL_like: 4-Amino-4-deoxychor 1e-18
TIGR01121276 TIGR01121, D_amino_aminoT, D-amino acid aminotrans 6e-18
PRK07650283 PRK07650, PRK07650, 4-amino-4-deoxychorismate lyas 2e-15
PRK07849292 PRK07849, PRK07849, 4-amino-4-deoxychorismate lyas 8e-14
TIGR03461261 TIGR03461, pabC_Proteo, aminodeoxychorismate lyase 2e-13
PRK12479299 PRK12479, PRK12479, branched-chain amino acid amin 2e-12
PRK06092268 PRK06092, PRK06092, 4-amino-4-deoxychorismate lyas 3e-12
PRK12400290 PRK12400, PRK12400, D-amino acid aminotransferase; 1e-07
PLN02845336 PLN02845, PLN02845, Branched-chain-amino-acid amin 0.002
>gnl|CDD|215418 PLN02782, PLN02782, Branched-chain amino acid aminotransferase Back     alignment and domain information 
 Score =  448 bits (1155), Expect = e-160
 Identities = 190/209 (90%), Positives = 200/209 (95%)

Query: 1   MGSGAVLGLAPAPEYTFLIYVSPVGNYFKEGIAPINLVVEHELHRATPGGTGGVKTIGNY 60
           MGSGAVLGLAPAPEYTFLIYVSPVGNYFKEG+APINL+VE+E HRATPGGTGGVKTIGNY
Sbjct: 195 MGSGAVLGLAPAPEYTFLIYVSPVGNYFKEGVAPINLIVENEFHRATPGGTGGVKTIGNY 254

Query: 61  AAVLKAQSAAKAKGYSDVLYLDCVHKRYLEEVSSCNIFVVKGNVISTPAIKGTILPGITR 120
           AAVLKAQS AKAKGYSDVLYLDCVHK+YLEEVSSCNIF+VK NVISTPAIKGTILPGITR
Sbjct: 255 AAVLKAQSIAKAKGYSDVLYLDCVHKKYLEEVSSCNIFIVKDNVISTPAIKGTILPGITR 314

Query: 121 KSIIDVAQSQGFQVEERLVTVEELLDADEVFCTGTAVVVSPVGSITYLGKRVSYGEGGFG 180
           KSIIDVA+SQGFQVEER VTV+ELL+ADEVFCTGTAVVVSPVGSITY GKRVSYGEGGFG
Sbjct: 315 KSIIDVARSQGFQVEERNVTVDELLEADEVFCTGTAVVVSPVGSITYKGKRVSYGEGGFG 374

Query: 181 AVSQQLYSVLTQLQMGLIADKMNWTLELS 209
            VSQQLY+VLT LQMGLI D MNWT+ELS
Sbjct: 375 TVSQQLYTVLTSLQMGLIEDNMNWTVELS 403

Length = 403
>gnl|CDD|237363 PRK13357, PRK13357, branched-chain amino acid aminotransferase; Provisional Back     alignment and domain information
>gnl|CDD|177901 PLN02259, PLN02259, branched-chain-amino-acid aminotransferase 2 Back     alignment and domain information
>gnl|CDD|178664 PLN03117, PLN03117, Branched-chain-amino-acid aminotransferase; Provisional Back     alignment and domain information
>gnl|CDD|238798 cd01557, BCAT_beta_family, BCAT_beta_family: Branched-chain aminotransferase catalyses the transamination of the branched-chain amino acids leusine, isoleucine and valine to their respective alpha-keto acids, alpha-ketoisocaproate, alpha-keto-beta-methylvalerate and alpha-ketoisovalerate Back     alignment and domain information
>gnl|CDD|178471 PLN02883, PLN02883, Branched-chain amino acid aminotransferase Back     alignment and domain information
>gnl|CDD|233278 TIGR01123, ilvE_II, branched-chain amino acid aminotransferase, group II Back     alignment and domain information
>gnl|CDD|238254 cd00449, PLPDE_IV, PyridoxaL 5'-Phosphate Dependent Enzymes class IV (PLPDE_IV) Back     alignment and domain information
>gnl|CDD|223193 COG0115, IlvE, Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase [Amino acid transport and metabolism / Coenzyme metabolism] Back     alignment and domain information
>gnl|CDD|216275 pfam01063, Aminotran_4, Aminotransferase class IV Back     alignment and domain information
>gnl|CDD|235841 PRK06606, PRK06606, branched-chain amino acid aminotransferase; Validated Back     alignment and domain information
>gnl|CDD|238799 cd01558, D-AAT_like, D-Alanine aminotransferase (D-AAT_like): D-amino acid aminotransferase catalyzes transamination between D-amino acids and their respective alpha-keto acids Back     alignment and domain information
>gnl|CDD|130192 TIGR01122, ilvE_I, branched-chain amino acid aminotransferase, group I Back     alignment and domain information
>gnl|CDD|181025 PRK07544, PRK07544, branched-chain amino acid aminotransferase; Validated Back     alignment and domain information
>gnl|CDD|236238 PRK08320, PRK08320, branched-chain amino acid aminotransferase; Reviewed Back     alignment and domain information
>gnl|CDD|180656 PRK06680, PRK06680, D-amino acid aminotransferase; Reviewed Back     alignment and domain information
>gnl|CDD|237362 PRK13356, PRK13356, aminotransferase; Provisional Back     alignment and domain information
>gnl|CDD|238800 cd01559, ADCL_like, ADCL_like: 4-Amino-4-deoxychorismate lyase: is a member of the fold-type IV of PLP dependent enzymes that converts 4-amino-4-deoxychorismate (ADC) to p-aminobenzoate and pyruvate Back     alignment and domain information
>gnl|CDD|130191 TIGR01121, D_amino_aminoT, D-amino acid aminotransferase Back     alignment and domain information
>gnl|CDD|181067 PRK07650, PRK07650, 4-amino-4-deoxychorismate lyase; Provisional Back     alignment and domain information
>gnl|CDD|236114 PRK07849, PRK07849, 4-amino-4-deoxychorismate lyase; Provisional Back     alignment and domain information
>gnl|CDD|132501 TIGR03461, pabC_Proteo, aminodeoxychorismate lyase Back     alignment and domain information
>gnl|CDD|183549 PRK12479, PRK12479, branched-chain amino acid aminotransferase; Provisional Back     alignment and domain information
>gnl|CDD|235696 PRK06092, PRK06092, 4-amino-4-deoxychorismate lyase; Reviewed Back     alignment and domain information
>gnl|CDD|171470 PRK12400, PRK12400, D-amino acid aminotransferase; Reviewed Back     alignment and domain information
>gnl|CDD|215454 PLN02845, PLN02845, Branched-chain-amino-acid aminotransferase-like protein Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 209
PLN02782403 Branched-chain amino acid aminotransferase 100.0
PLN02259388 branched-chain-amino-acid aminotransferase 2 100.0
PLN02883384 Branched-chain amino acid aminotransferase 100.0
PLN03117355 Branched-chain-amino-acid aminotransferase; Provis 100.0
TIGR01123313 ilvE_II branched-chain amino acid aminotransferase 100.0
TIGR01122298 ilvE_I branched-chain amino acid aminotransferase, 100.0
PRK13357356 branched-chain amino acid aminotransferase; Provis 100.0
KOG0975379 consensus Branched chain aminotransferase BCAT1, p 100.0
PRK06606306 branched-chain amino acid aminotransferase; Valida 100.0
cd01557279 BCAT_beta_family BCAT_beta_family: Branched-chain 100.0
PRK12479299 branched-chain amino acid aminotransferase; Provis 100.0
cd00449256 PLPDE_IV PyridoxaL 5'-Phosphate Dependent Enzymes 100.0
PRK08320288 branched-chain amino acid aminotransferase; Review 100.0
PRK13356286 aminotransferase; Provisional 100.0
cd01558270 D-AAT_like D-Alanine aminotransferase (D-AAT_like) 100.0
PRK07544292 branched-chain amino acid aminotransferase; Valida 100.0
PRK12400290 D-amino acid aminotransferase; Reviewed 100.0
COG0115284 IlvE Branched-chain amino acid aminotransferase/4- 100.0
PRK06092268 4-amino-4-deoxychorismate lyase; Reviewed 100.0
PRK07650283 4-amino-4-deoxychorismate lyase; Provisional 100.0
cd01559249 ADCL_like ADCL_like: 4-Amino-4-deoxychorismate lya 100.0
PLN02845336 Branched-chain-amino-acid aminotransferase-like pr 100.0
PRK06680286 D-amino acid aminotransferase; Reviewed 100.0
TIGR01121276 D_amino_aminoT D-amino acid aminotransferase. Spec 100.0
PRK07849292 4-amino-4-deoxychorismate lyase; Provisional 100.0
TIGR03461261 pabC_Proteo aminodeoxychorismate lyase. Members of 100.0
PRK09266266 hypothetical protein; Provisional 100.0
PF01063231 Aminotran_4: Aminotransferase class IV; InterPro: 100.0
PRK07546209 hypothetical protein; Provisional 99.97
PRK07101187 hypothetical protein; Provisional 99.88
>PLN02782 Branched-chain amino acid aminotransferase Back     alignment and domain information 
Probab=100.00  E-value=7.2e-48  Score=345.57  Aligned_cols=208  Identities=91%  Similarity=1.376  Sum_probs=193.4

Q ss_pred             CCCCCCCcCCCCCcEEEEEEEecCCcccCCcccEEEEEeccccccCCCCCCCCccccCHHHHHHHHHHHHHCCCCEEEEE
Q 028415            2 GSGAVLGLAPAPEYTFLIYVSPVGNYFKEGIAPINLVVEHELHRATPGGTGGVKTIGNYAAVLKAQSAAKAKGYSDVLYL   81 (209)
Q Consensus         2 g~~~~~G~~~~~~~~~~i~~~p~~~~~~~g~~~~~l~~~~~~~r~~~~~~~~~Kt~~~y~~~~~a~~~A~~~g~de~lll   81 (209)
                      |+++.+|+.++.+++++|++.|.++++..|.+++++.++.+++|..|++++++|+++||+++++++++|+++|+||+|++
T Consensus       196 g~~~~lG~~~~~~~~~~i~~~p~~~~~~~g~~~v~l~v~~~~~Ra~p~g~g~~Kt~~nY~~~l~a~~eA~~~G~de~L~L  275 (403)
T PLN02782        196 GSGAVLGLAPAPEYTFLIYVSPVGNYFKEGVAPINLIVENEFHRATPGGTGGVKTIGNYAAVLKAQSIAKAKGYSDVLYL  275 (403)
T ss_pred             ecCCCcCcCCCCCcEEEEEEEECccccccCCccEEEEEeCceeecCCCCCcccchhhhHHHHHHHHHHHHHcCCCEEEEE
Confidence            55667899887789999999999887777777888888766889999999999998899999999999999999999999


Q ss_pred             cCccCeEEEeeCceEEEEEECCEEEecCCCCCcccCcHHHHHHHHHHHCCCcEEEEEcCHHHHhccceeEEEeccCeeEE
Q 028415           82 DCVHKRYLEEVSSCNIFVVKGNVISTPAIKGTILPGITRKSIIDVAQSQGFQVEERLVTVEELLDADEVFCTGTAVVVSP  161 (209)
Q Consensus        82 d~~~~g~v~E~s~~Nlf~~~~~~l~TP~~~~~~L~GitR~~vl~~a~~~g~~v~e~~i~~~el~~ade~fl~ns~~gi~p  161 (209)
                      |...+|+|+|++++|+|++++++|+||+++.++|+||||+.||++|+++|++|+|++++++||.+|||+|+|||+.+|+|
T Consensus       276 d~~~~g~V~E~~~sNlF~v~~~~l~TP~l~~~iLpGITR~svlela~~~Gi~V~Er~i~~~eL~~AdEvF~tgTa~~V~P  355 (403)
T PLN02782        276 DCVHKKYLEEVSSCNIFIVKDNVISTPAIKGTILPGITRKSIIDVARSQGFQVEERNVTVDELLEADEVFCTGTAVVVSP  355 (403)
T ss_pred             eCCCCCEEEEcCcEEEEEEECCEEEcCCCcCCcCcCHHHHHHHHHHHHcCCeEEEEECCHHHHhhCCEEEEccCcceEEE
Confidence            94227999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EEEEEECCeEEEcCCCCccHHHHHHHHHHHHHHhcCcCCCCCCeeeCC
Q 028415          162 VGSITYLGKRVSYGEGGFGAVSQQLYSVLTQLQMGLIADKMNWTLELS  209 (209)
Q Consensus       162 V~~i~~~~~~~~~~~g~~g~~t~~L~~~~~~~~~g~~~~~~~w~~~~~  209 (209)
                      |.+|.++|+.+.+++|++||++++|++.|.++|+|+.+|+++|+.+|+
T Consensus       356 V~~I~~~g~~~~~~~g~~Gpvt~~L~~~l~~iq~G~~~~~~~W~~~v~  403 (403)
T PLN02782        356 VGSITYKGKRVSYGEGGFGTVSQQLYTVLTSLQMGLIEDNMNWTVELS  403 (403)
T ss_pred             EEEEEECCEEEeCCCCCcCHHHHHHHHHHHHHhcCCCCCCCCCeEECC
Confidence            999988899887788889999999999999999999999999999884

>PLN02259 branched-chain-amino-acid aminotransferase 2 Back     alignment and domain information
>PLN02883 Branched-chain amino acid aminotransferase Back     alignment and domain information
>PLN03117 Branched-chain-amino-acid aminotransferase; Provisional Back     alignment and domain information
>TIGR01123 ilvE_II branched-chain amino acid aminotransferase, group II Back     alignment and domain information
>TIGR01122 ilvE_I branched-chain amino acid aminotransferase, group I Back     alignment and domain information
>PRK13357 branched-chain amino acid aminotransferase; Provisional Back     alignment and domain information
>KOG0975 consensus Branched chain aminotransferase BCAT1, pyridoxal phosphate enzymes type IV superfamily [Amino acid transport and metabolism] Back     alignment and domain information
>PRK06606 branched-chain amino acid aminotransferase; Validated Back     alignment and domain information
>cd01557 BCAT_beta_family BCAT_beta_family: Branched-chain aminotransferase catalyses the transamination of the branched-chain amino acids leusine, isoleucine and valine to their respective alpha-keto acids, alpha-ketoisocaproate, alpha-keto-beta-methylvalerate and alpha-ketoisovalerate Back     alignment and domain information
>PRK12479 branched-chain amino acid aminotransferase; Provisional Back     alignment and domain information
>cd00449 PLPDE_IV PyridoxaL 5'-Phosphate Dependent Enzymes class IV (PLPDE_IV) Back     alignment and domain information
>PRK08320 branched-chain amino acid aminotransferase; Reviewed Back     alignment and domain information
>PRK13356 aminotransferase; Provisional Back     alignment and domain information
>cd01558 D-AAT_like D-Alanine aminotransferase (D-AAT_like): D-amino acid aminotransferase catalyzes transamination between D-amino acids and their respective alpha-keto acids Back     alignment and domain information
>PRK07544 branched-chain amino acid aminotransferase; Validated Back     alignment and domain information
>PRK12400 D-amino acid aminotransferase; Reviewed Back     alignment and domain information
>COG0115 IlvE Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase [Amino acid transport and metabolism / Coenzyme metabolism] Back     alignment and domain information
>PRK06092 4-amino-4-deoxychorismate lyase; Reviewed Back     alignment and domain information
>PRK07650 4-amino-4-deoxychorismate lyase; Provisional Back     alignment and domain information
>cd01559 ADCL_like ADCL_like: 4-Amino-4-deoxychorismate lyase: is a member of the fold-type IV of PLP dependent enzymes that converts 4-amino-4-deoxychorismate (ADC) to p-aminobenzoate and pyruvate Back     alignment and domain information
>PLN02845 Branched-chain-amino-acid aminotransferase-like protein Back     alignment and domain information
>PRK06680 D-amino acid aminotransferase; Reviewed Back     alignment and domain information
>TIGR01121 D_amino_aminoT D-amino acid aminotransferase Back     alignment and domain information
>PRK07849 4-amino-4-deoxychorismate lyase; Provisional Back     alignment and domain information
>TIGR03461 pabC_Proteo aminodeoxychorismate lyase Back     alignment and domain information
>PRK09266 hypothetical protein; Provisional Back     alignment and domain information
>PF01063 Aminotran_4: Aminotransferase class IV; InterPro: IPR001544 Aminotransferases share certain mechanistic features with other pyridoxal-phosphate dependent enzymes, such as the covalent binding of the pyridoxal-phosphate group to a lysine residue Back     alignment and domain information
>PRK07546 hypothetical protein; Provisional Back     alignment and domain information
>PRK07101 hypothetical protein; Provisional Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query209
3ht5_A368 Crystal Structure Of Ilve A Branched Chain Amino Ac 2e-32
3jz6_A373 Crystal Structure Of Mycobacterium Smegmatis Branch 1e-31
3dtf_A372 Structural Analysis Of Mycobacterial Branched Chain 1e-31
4dqn_A345 Crystal Structure Of The Branched-Chain Aminotransf 3e-28
3uyy_A358 Crystal Structures Of Branched-Chain Aminotransfera 9e-21
2abj_A366 Crystal Structure Of Human Branched Chain Amino Aci 8e-17
2cog_A386 Crystal Structure Of Oxidized Human Cytosolic Branc 1e-16
2hdk_A365 Crystal Structure Of Cys315ala-Cys318ala Mutant Of 2e-13
2hgw_A365 Crystal Structure Of Cys318ala Mutant Of Human Mito 2e-13
1i1k_A309 Crystal Structure Of Eschelichia Coli Branched-chai 3e-13
1a3g_A308 Branched-chain Amino Acid Aminotransferase From Esc 3e-13
2hg8_A365 Crystal Structure Of Cys315ala Mutant Of Human Mito 3e-13
1ekf_A365 Crystallographic Structure Of Human Branched Chain 3e-13
2hhf_A365 X-ray Crystal Structure Of Oxidized Human Mitochond 4e-13
2hhf_B365 X-ray Crystal Structure Of Oxidized Human Mitochond 4e-13
1wrv_A308 Crystal Structure Of T.Th.Hb8 Branched-Chain Amino 1e-09
3u0g_A328 Crystal Structure Of Branched-Chain Amino Acid Amin 1e-08
3lul_A272 Crystal Structure Of Putative 4-Amino-4-Deoxychoris 8e-07
3csw_A285 Crystal Structure Of A Putative Branched-Chain Amin 4e-05
>pdb|3HT5|A Chain A, Crystal Structure Of Ilve A Branched Chain Amino Acid Transaminase From Mycobacterium Tuberculosis Length = 368 Back     alignment and structure 
Iteration: 1

 Score =  135 bits (340), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 77/212 (36%), Positives = 105/212 (49%), Gaps = 10/212 (4%)
Query: 7   LGLAPAPEYTFLIYVSPVGNYFKEGIAPINLVVEHELHRATPGGTGGVKTIGNYXXXXXX 66
           LG+ PA +Y +L+  SP G YFK GIAP+++ V  E  RA PGGTG  K  GNY      
Sbjct: 156 LGVRPATQYRYLLIASPAGAYFKGGIAPVSVWVSTEYVRACPGGTGAAKFGGNYAASLLA 215
Query: 67  XXXXXXXGYSDVLYLDCVHKRYLEEVSSCNIFVVKGN----VISTPAIKGTILPGITRKS 122
                  G   V++LD V +RY+EE+   NIF V G+     + TP + G++LPGITR S
Sbjct: 216 QAEAAENGCDQVVWLDAVERRYIEEMGGMNIFFVLGSGGSARLVTPELSGSLLPGITRDS 275
Query: 123 IIDVAQSQGFQXXXXX------XXXXXXXDADEVFCTGTAVVVSPVGSITYLGKRVSYGE 176
           ++ +A   GF                   +  EVF  GTA V++PV  + +        +
Sbjct: 276 LLQLAIDAGFAVEERRIDIDEWQKKAAAGEITEVFACGTAAVITPVARVRHGASEFRIAD 335
Query: 177 GGFGAVSQQLYSVLTQLQMGLIADKMNWTLEL 208
           G  G V+  L   LT +Q G  AD   W   L
Sbjct: 336 GQPGEVTMALRDTLTGIQRGTFADTHGWMARL 367
>pdb|3JZ6|A Chain A, Crystal Structure Of Mycobacterium Smegmatis Branched Chain Aminotransferase In Complex With Pyridoxal-5'-Phosphate At 1.9 Angstrom. Length = 373 Back     alignment and structure
>pdb|3DTF|A Chain A, Structural Analysis Of Mycobacterial Branched Chain Aminotransferase- Implications For Inhibitor Design Length = 372 Back     alignment and structure
>pdb|4DQN|A Chain A, Crystal Structure Of The Branched-Chain Aminotransferase From Streptococcus Mutans Length = 345 Back     alignment and structure
>pdb|3UYY|A Chain A, Crystal Structures Of Branched-Chain Aminotransferase From Deinococcus Radiodurans Complexes With Alpha-Ketoisocaproate And L-Glutamate Suggest Its Radio-Resistance For Catalysis Length = 358 Back     alignment and structure
>pdb|2ABJ|A Chain A, Crystal Structure Of Human Branched Chain Amino Acid Transaminase In A Complex With An Inhibitor, C16h10n2o4f3scl, And Pyridoxal 5' Phosphate. Length = 366 Back     alignment and structure
>pdb|2COG|A Chain A, Crystal Structure Of Oxidized Human Cytosolic Branched-Chain Aminotransferase Complexed With 4-Methylvalerate Length = 386 Back     alignment and structure
>pdb|2HDK|A Chain A, Crystal Structure Of Cys315ala-Cys318ala Mutant Of Human Mitochondrial Branched Chain Aminotransferase Length = 365 Back     alignment and structure
>pdb|2HGW|A Chain A, Crystal Structure Of Cys318ala Mutant Of Human Mitochondrial Branched Chain Aminotransferase Length = 365 Back     alignment and structure
>pdb|1I1K|A Chain A, Crystal Structure Of Eschelichia Coli Branched-chain Amino Acid Aminotransferase. Length = 309 Back     alignment and structure
>pdb|1A3G|A Chain A, Branched-chain Amino Acid Aminotransferase From Escherichia Coli Length = 308 Back     alignment and structure
>pdb|2HG8|A Chain A, Crystal Structure Of Cys315ala Mutant Of Human Mitochondrial Branched Chain Aminotransferase Complexed With Its Substrate Mimic, N-Methyl Leucine. Length = 365 Back     alignment and structure
>pdb|1EKF|A Chain A, Crystallographic Structure Of Human Branched Chain Amino Acid Aminotransferase (Mitochondrial) Complexed With Pyridoxal-5'- Phosphate At 1.95 Angstroms (Orthorhombic Form) Length = 365 Back     alignment and structure
>pdb|2HHF|A Chain A, X-ray Crystal Structure Of Oxidized Human Mitochondrial Branched Chain Aminotransferase (hbcatm) Length = 365 Back     alignment and structure
>pdb|2HHF|B Chain B, X-ray Crystal Structure Of Oxidized Human Mitochondrial Branched Chain Aminotransferase (hbcatm) Length = 365 Back     alignment and structure
>pdb|1WRV|A Chain A, Crystal Structure Of T.Th.Hb8 Branched-Chain Amino Acid Aminotransferase Length = 308 Back     alignment and structure
>pdb|3U0G|A Chain A, Crystal Structure Of Branched-Chain Amino Acid Aminotransferase From Burkholderia Pseudomallei Length = 328 Back     alignment and structure
>pdb|3LUL|A Chain A, Crystal Structure Of Putative 4-Amino-4-Deoxychorismate Lyase. (Yp_094631.1) From Legionella Pneumophila Subsp. Pneumophila Str. Philadelphia 1 At 1.78 A Resolution Length = 272 Back     alignment and structure
>pdb|3CSW|A Chain A, Crystal Structure Of A Putative Branched-Chain Amino Acid Aminotransferase (Tm0831) From Thermotoga Maritima At 2.15 A Resolution Length = 285 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query209
3dth_A372 Branched-chain amino acid aminotransferase; open t 1e-105
2a1h_A365 Branched chain aminotransferase; fold type IV; HET 1e-90
2coi_A386 Branched chain aminotransferase 1, cytosolic; PLP- 1e-90
3sno_A315 Hypothetical aminotransferase; D-aminoacid aminotr 3e-39
1iye_A309 Branched-chain amino acid aminotransferase; hexame 5e-38
1i2k_A269 4-amino-4-deoxychorismate lyase; pyridoxal phospha 2e-36
2eiy_A308 ILVE, branched-chain amino acid aminotransferase; 4e-36
3u0g_A328 Putative branched-chain amino acid aminotransfera; 1e-35
3lul_A272 4-amino-4-deoxychorismate lyase; structural genomi 1e-33
3csw_A285 BCAT, putative branched-chain-amino-acid aminotran 3e-33
2xpf_A292 4-amino-4-deoxychorismate lyase; para-aminobenzoic 8e-33
3daa_A277 D-amino acid aminotransferase; pyridoxal phosphate 3e-31
2zgi_A246 Putative 4-amino-4-deoxychorismate lyase; TTHA0621 4e-28
3qqm_A221 MLR3007 protein; structural genomics, joint center 3e-22
3ceb_A194 D-aminoacid aminotransferase-like PLP-dependent E; 6e-14
>2a1h_A Branched chain aminotransferase; fold type IV; HET: PLP GBN; 1.80A {Homo sapiens} SCOP: e.17.1.1 PDB: 1ekp_A* 1ekv_A* 1ekf_A* 1kta_A* 1kt8_A* 2hhf_B* 2hhf_A* 2hgw_A* 2hg8_A* 2hgx_A* 2hdk_A* Length = 365 Back     alignment and structure
>2coi_A Branched chain aminotransferase 1, cytosolic; PLP-dependent enzyme; HET: PLP GBN; 1.90A {Homo sapiens} PDB: 2cog_A* 2coj_A* 2abj_A* Length = 386 Back     alignment and structure
>3sno_A Hypothetical aminotransferase; D-aminoacid aminotransferase-like PLP-dependent enzymes, STR genomics; HET: MSE; 1.60A {Corynebacterium glutamicum} Length = 315 Back     alignment and structure
>1iye_A Branched-chain amino acid aminotransferase; hexamer, PLP; HET: PGU; 1.82A {Escherichia coli} SCOP: e.17.1.1 PDB: 1i1l_A* 1i1m_A* 1iyd_A* 1i1k_A* 1a3g_A* Length = 309 Back     alignment and structure
>1i2k_A 4-amino-4-deoxychorismate lyase; pyridoxal phosphate, PABC; HET: PLP; 1.79A {Escherichia coli} SCOP: e.17.1.1 PDB: 1et0_A* 1i2l_A* Length = 269 Back     alignment and structure
>2eiy_A ILVE, branched-chain amino acid aminotransferase; PLP-dependent enzyme; HET: PLP; 1.35A {Thermus thermophilus} PDB: 1wrv_A* 2ej0_A* 2ej2_A* 2ej3_A* Length = 308 Back     alignment and structure
>3u0g_A Putative branched-chain amino acid aminotransfera; structural genomics, seattle structural genomics center for infectious disease; 1.90A {Burkholderia pseudomallei} Length = 328 Back     alignment and structure
>3lul_A 4-amino-4-deoxychorismate lyase; structural genomi center for structural genomics, JCSG, protein structure INI PSI-2, pyridoxal phosphate; HET: MSE LLP; 1.78A {Legionella pneumophila} Length = 272 Back     alignment and structure
>3csw_A BCAT, putative branched-chain-amino-acid aminotransfera; TM0831, putative branched-chain amino acid aminotransferase; HET: PLP CIT; 2.15A {Thermotoga maritima MSB8} Length = 285 Back     alignment and structure
>3daa_A D-amino acid aminotransferase; pyridoxal phosphate, transaminase; HET: PDD; 1.90A {Bacillus SP} SCOP: e.17.1.1 PDB: 4daa_A* 3lqs_A* 1daa_A* 2daa_A* 5daa_A* 1g2w_A* 1a0g_A* 2dab_A* Length = 277 Back     alignment and structure
>2zgi_A Putative 4-amino-4-deoxychorismate lyase; TTHA0621, PLP cofactor, pyridoxal enzyme, structural NPPSFA; HET: PLP PGE; 1.93A {Thermus thermophilus} Length = 246 Back     alignment and structure
>3qqm_A MLR3007 protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology, transferase; HET: LLP; 2.30A {Mesorhizobium loti} Length = 221 Back     alignment and structure
>3ceb_A D-aminoacid aminotransferase-like PLP-dependent E; joint center for structural genomics, protein structure initiative, PSI-2, lyase; HET: LLP; 2.40A {Haemophilus somnus} Length = 194 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query209
3dtg_A372 Branched-chain amino acid aminotransferase; open t 100.0
3dth_A372 Branched-chain amino acid aminotransferase; open t 100.0
4dqn_A345 Putative branched-chain amino acid aminotransfera; 100.0
3u0g_A328 Putative branched-chain amino acid aminotransfera; 100.0
3uzo_A358 Branched-chain-amino-acid aminotransferase; BCAT, 100.0
2a1h_A365 Branched chain aminotransferase; fold type IV; HET 100.0
2eiy_A308 ILVE, branched-chain amino acid aminotransferase; 100.0
1iye_A309 Branched-chain amino acid aminotransferase; hexame 100.0
2coi_A386 Branched chain aminotransferase 1, cytosolic; PLP- 100.0
1i2k_A269 4-amino-4-deoxychorismate lyase; pyridoxal phospha 100.0
3daa_A277 D-amino acid aminotransferase; pyridoxal phosphate 100.0
2xpf_A292 4-amino-4-deoxychorismate lyase; para-aminobenzoic 100.0
3csw_A285 BCAT, putative branched-chain-amino-acid aminotran 100.0
3lul_A272 4-amino-4-deoxychorismate lyase; structural genomi 100.0
3sno_A315 Hypothetical aminotransferase; D-aminoacid aminotr 100.0
3qqm_A221 MLR3007 protein; structural genomics, joint center 99.98
2zgi_A246 Putative 4-amino-4-deoxychorismate lyase; TTHA0621 99.97
3ceb_A194 D-aminoacid aminotransferase-like PLP-dependent E; 99.95
>3dtg_A Branched-chain amino acid aminotransferase; open twisted alpha/beta; HET: PLP; 1.90A {Mycobacterium smegmatis} PDB: 3dtf_A* 3jz6_A* 3ht5_A* Back     alignment and structure
Probab=100.00  E-value=1.8e-48  Score=345.90  Aligned_cols=208  Identities=40%  Similarity=0.717  Sum_probs=191.1

Q ss_pred             CCCCCCCcCCCCCcEEEEEEEecCCcccCCcccEEEEEeccccccCCCCCCCCccccCHHHHHHHHHHHHHCCCCEEEEE
Q 028415            2 GSGAVLGLAPAPEYTFLIYVSPVGNYFKEGIAPINLVVEHELHRATPGGTGGVKTIGNYAAVLKAQSAAKAKGYSDVLYL   81 (209)
Q Consensus         2 g~~~~~G~~~~~~~~~~i~~~p~~~~~~~g~~~~~l~~~~~~~r~~~~~~~~~Kt~~~y~~~~~a~~~A~~~g~de~lll   81 (209)
                      ++++.+|+.|+..+.+++++.|..+++..+..+..+.+..++.|+.|......|..+||+++++++++|+++|+||+||+
T Consensus       155 ~~~~~lgv~p~~~~~~~ii~~p~~~~~~~~~~~~~~~~~~~~~R~~p~~~~~~K~~gNY~~~~la~~eA~~~G~deal~L  234 (372)
T 3dtg_A          155 ATEPGLGVRPSNEYRYLLIASPAGAYFKGGIKPVSVWLSHEYVRASPGGTGAAKFGGNYAASLLAQAQAAEMGCDQVVWL  234 (372)
T ss_dssp             ECCCCCSCSCCSEEEEEEEEEEESCSSTTSSSCEEEEECSSCCSCCTTSSTTSCCHHHHHHHHHHHHHHHHTTCSEEEEE
T ss_pred             eecCccCcCCCCCceeeeEecccccccccCcccceeecccceeecCcCCcchHHhcCCcchhhhHHHHHHhcCcchhhhh
Confidence            45567899888889999999999988877777777777777889999888888888899999999999999999999999


Q ss_pred             cCccCeEEEeeCceEEEEE----ECCEEEecCCCCCcccCcHHHHHHHHHHHCCCcEEEEEcCHHHHhcc------ceeE
Q 028415           82 DCVHKRYLEEVSSCNIFVV----KGNVISTPAIKGTILPGITRKSIIDVAQSQGFQVEERLVTVEELLDA------DEVF  151 (209)
Q Consensus        82 d~~~~g~v~E~s~~Nlf~~----~~~~l~TP~~~~~~L~GitR~~vl~~a~~~g~~v~e~~i~~~el~~a------de~f  151 (209)
                      |...+|+|+|++++|||+|    ++|+|+|||++.++|+||||+.||++|+++|++|+|++++++||..|      ||+|
T Consensus       235 d~~~~g~V~E~~~sNiF~V~~~~kdg~liTPpl~~~iL~GITR~sVi~LA~~~Gi~V~Er~it~~El~~A~~~~~~dEvF  314 (372)
T 3dtg_A          235 DAIERRYVEEMGGMNLFFVFGSGGSARLVTPELSGSLLPGITRDSLLQLATDAGFAVEERKIDVDEWQKKAGAGEITEVF  314 (372)
T ss_dssp             CTTTSCBEEEETTEEEEEEESCGGGCEEEECCCCSSSCCCHHHHHHHHHHHHHTCEEEECCCBHHHHHHHHHHTSEEEEE
T ss_pred             ccccccceeecCceEEEEEEecCCCceEEeCCccccccccHHHHHHHHHHHHCCceEEEEeCCHHHHHHHhhcCCCcEEE
Confidence            9544899999999999999    56799999999999999999999999999999999999999999998      9999


Q ss_pred             EEeccCeeEEEEEEEECCeEEEcCCCCccHHHHHHHHHHHHHHhcCcCCCCCCeeeCC
Q 028415          152 CTGTAVVVSPVGSITYLGKRVSYGEGGFGAVSQQLYSVLTQLQMGLIADKMNWTLELS  209 (209)
Q Consensus       152 l~ns~~gi~pV~~i~~~~~~~~~~~g~~g~~t~~L~~~~~~~~~g~~~~~~~w~~~~~  209 (209)
                      +|||+.+|.||.+|+..+..+.+++|++||+|++|+++|.+||+|+.+|+++|+..|.
T Consensus       315 ~tGTaa~I~PV~~Id~~~~~~~ig~G~~Gpvt~~L~~~~~~iq~G~~~d~~~W~~~v~  372 (372)
T 3dtg_A          315 ACGTAAVITPVSHVKHHDGEFTIADGQPGEITMALRDTLTGIQRGTFADTHGWMARLN  372 (372)
T ss_dssp             EEETTTEEEEEEEEEETTEEEECTTSSCCHHHHHHHHHHHHHHTTSSCCTTCCEEECC
T ss_pred             ECCCcceEEEEEEEecCCceEEcCCCCcCHHHHHHHHHHHHHHCCCCCCCCCCcEeCC
Confidence            9999999999999987677766799999999999999999999999999999999883
>4dqn_A Putative branched-chain amino acid aminotransfera; aminotransferase, transferase; 1.97A {Streptococcus mutans} Back     alignment and structure
>3u0g_A Putative branched-chain amino acid aminotransfera; structural genomics, seattle structural genomics center for infectious disease; 1.90A {Burkholderia pseudomallei} Back     alignment and structure
>3uzo_A Branched-chain-amino-acid aminotransferase; BCAT, amino-acid biosynthesis, branched-CH acid biosynthesis, pyridoxal phosphate, L-GLUT; HET: PLP GLU; 2.00A {Deinococcus radiodurans} PDB: 3uzb_A* 3uyy_A* Back     alignment and structure
>2a1h_A Branched chain aminotransferase; fold type IV; HET: PLP GBN; 1.80A {Homo sapiens} SCOP: e.17.1.1 PDB: 1ekp_A* 1ekv_A* 1ekf_A* 1kta_A* 1kt8_A* 2hhf_B* 2hhf_A* 2hgw_A* 2hg8_A* 2hgx_A* 2hdk_A* Back     alignment and structure
>2eiy_A ILVE, branched-chain amino acid aminotransferase; PLP-dependent enzyme; HET: PLP; 1.35A {Thermus thermophilus} PDB: 1wrv_A* 2ej0_A* 2ej2_A* 2ej3_A* Back     alignment and structure
>1iye_A Branched-chain amino acid aminotransferase; hexamer, PLP; HET: PGU; 1.82A {Escherichia coli} SCOP: e.17.1.1 PDB: 1i1l_A* 1i1m_A* 1iyd_A* 1i1k_A* 1a3g_A* Back     alignment and structure
>2coi_A Branched chain aminotransferase 1, cytosolic; PLP-dependent enzyme; HET: PLP GBN; 1.90A {Homo sapiens} PDB: 2cog_A* 2coj_A* 2abj_A* Back     alignment and structure
>1i2k_A 4-amino-4-deoxychorismate lyase; pyridoxal phosphate, PABC; HET: PLP; 1.79A {Escherichia coli} SCOP: e.17.1.1 PDB: 1et0_A* 1i2l_A* Back     alignment and structure
>3daa_A D-amino acid aminotransferase; pyridoxal phosphate, transaminase; HET: PDD; 1.90A {Bacillus SP} SCOP: e.17.1.1 PDB: 4daa_A* 3lqs_A* 1daa_A* 2daa_A* 5daa_A* 1g2w_A* 1a0g_A* 2dab_A* Back     alignment and structure
>3csw_A BCAT, putative branched-chain-amino-acid aminotransfera; TM0831, putative branched-chain amino acid aminotransferase; HET: PLP CIT; 2.15A {Thermotoga maritima MSB8} Back     alignment and structure
>3lul_A 4-amino-4-deoxychorismate lyase; structural genomi center for structural genomics, JCSG, protein structure INI PSI-2, pyridoxal phosphate; HET: MSE LLP; 1.78A {Legionella pneumophila} Back     alignment and structure
>3sno_A Hypothetical aminotransferase; D-aminoacid aminotransferase-like PLP-dependent enzymes, STR genomics; HET: MSE; 1.60A {Corynebacterium glutamicum} Back     alignment and structure
>3qqm_A MLR3007 protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology, transferase; HET: LLP; 2.30A {Mesorhizobium loti} Back     alignment and structure
>2zgi_A Putative 4-amino-4-deoxychorismate lyase; TTHA0621, PLP cofactor, pyridoxal enzyme, structural NPPSFA; HET: PLP PGE; 1.93A {Thermus thermophilus} Back     alignment and structure
>3ceb_A D-aminoacid aminotransferase-like PLP-dependent E; joint center for structural genomics, protein structure initiative, PSI-2, lyase; HET: LLP; 2.40A {Haemophilus somnus} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 209
d1iyea_304 e.17.1.1 (A:) Branched-chain aminoacid aminotransf 7e-37
d2a1ha1363 e.17.1.1 (A:3-365) Branched-chain aminoacid aminot 5e-30
d1daaa_277 e.17.1.1 (A:) D-aminoacid aminotransferase {Bacill 9e-20
d1i2ka_269 e.17.1.1 (A:) Aminodeoxychorismate lyase {Escheric 5e-16
>d1iyea_ e.17.1.1 (A:) Branched-chain aminoacid aminotransferase {Escherichia coli [TaxId: 562]} Length = 304 Back     information, alignment and structure

class: Multi-domain proteins (alpha and beta)
fold: D-aminoacid aminotransferase-like PLP-dependent enzymes
superfamily: D-aminoacid aminotransferase-like PLP-dependent enzymes
family: D-aminoacid aminotransferase-like PLP-dependent enzymes
domain: Branched-chain aminoacid aminotransferase
species: Escherichia coli [TaxId: 562]

 Score =  128 bits (322), Expect = 7e-37
 Identities = 62/211 (29%), Positives = 96/211 (45%), Gaps = 8/211 (3%)

Query: 1   MGSGAVLGLAPAPEYTFLIYVSPVGNYFKEGIAPINL-VVEHELHRATPGGTGGVK-TIG 58
              G  +          +I   P G Y         +  +    +RA P          G
Sbjct: 100 GDVGMGVNPPAGYSTDVIIAAFPWGAYLGAEALEQGIDAMVSSWNRAAPNTIPTAAKAGG 159

Query: 59  NYAAVLKAQSAAKAKGYSDVLYLDCVHKRYLEEVSSCNIFVVKGNVISTPAIKGTILPGI 118
           NY + L   S A+  GY + + LD     Y+ E +  N+F VK  V+ TP    + LPGI
Sbjct: 160 NYLSSLLVGSEARRHGYQEGIALDVNG--YISEGAGENLFEVKDGVLFTPPFTSSALPGI 217

Query: 119 TRKSIIDVAQSQGFQVEERLVTVEELLDADEVFCTGTAVVVSPVGSITYLGKRVSYGEGG 178
           TR +II +A+  G +V E++++ E L  ADEVF +GTA  ++PV S+      +  GEG 
Sbjct: 218 TRDAIIKLAKELGIEVREQVLSRESLYLADEVFMSGTAAEITPVRSV----DGIQVGEGR 273

Query: 179 FGAVSQQLYSVLTQLQMGLIADKMNWTLELS 209
            G V++++      L  G   DK  W  +++
Sbjct: 274 CGPVTKRIQQAFFGLFTGETEDKWGWLDQVN 304
>d2a1ha1 e.17.1.1 (A:3-365) Branched-chain aminoacid aminotransferase {Human (Homo sapiens), mitochondrial [TaxId: 9606]} Length = 363 Back     information, alignment and structure
>d1daaa_ e.17.1.1 (A:) D-aminoacid aminotransferase {Bacillus sp., strain YM-1 [TaxId: 1409]} Length = 277 Back     information, alignment and structure
>d1i2ka_ e.17.1.1 (A:) Aminodeoxychorismate lyase {Escherichia coli [TaxId: 562]} Length = 269 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query209
d1iyea_304 Branched-chain aminoacid aminotransferase {Escheri 100.0
d2a1ha1363 Branched-chain aminoacid aminotransferase {Human ( 100.0
d1i2ka_269 Aminodeoxychorismate lyase {Escherichia coli [TaxI 100.0
d1daaa_277 D-aminoacid aminotransferase {Bacillus sp., strain 100.0
>d1iyea_ e.17.1.1 (A:) Branched-chain aminoacid aminotransferase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
class: Multi-domain proteins (alpha and beta)
fold: D-aminoacid aminotransferase-like PLP-dependent enzymes
superfamily: D-aminoacid aminotransferase-like PLP-dependent enzymes
family: D-aminoacid aminotransferase-like PLP-dependent enzymes
domain: Branched-chain aminoacid aminotransferase
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=2.5e-44  Score=307.82  Aligned_cols=196  Identities=35%  Similarity=0.554  Sum_probs=173.7

Q ss_pred             CCCCcCCC--CCcEEEEEEEecCCcccCC--cccEEEEEeccccccCCCC--CCCCccccCHHHHHHHHHHHHHCCCCEE
Q 028415            5 AVLGLAPA--PEYTFLIYVSPVGNYFKEG--IAPINLVVEHELHRATPGG--TGGVKTIGNYAAVLKAQSAAKAKGYSDV   78 (209)
Q Consensus         5 ~~~G~~~~--~~~~~~i~~~p~~~~~~~g--~~~~~l~~~~~~~r~~~~~--~~~~Kt~~~y~~~~~a~~~A~~~g~de~   78 (209)
                      +.+|+.++  ..+.+++.+.|...+....  ..++++.+. .+.|..|..  +...|+ +||+.++++.++|+++|+||+
T Consensus       102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~~~~-~~~r~~~~~~~~~~~k~-~n~~~~~~a~~~A~~~g~dea  179 (304)
T d1iyea_         102 VGMGVNPPAGYSTDVIIAAFPWGAYLGAEALEQGIDAMVS-SWNRAAPNTIPTAAKAG-GNYLSSLLVGSEARRHGYQEG  179 (304)
T ss_dssp             SCSSSSCCTTCCEEEEEEEECCCCTTCTTHHHHCEEEEEC-SSCCCCTTTSCTTSCBG-GGHHHHHHHHHHHHHTTCSEE
T ss_pred             cccccCCccccccceeeccccccccCChhhccCceEEEEe-eccccCCCCcccccccc-cCccccchhhhHHHHcCCcce
Confidence            35677655  4677888888876554322  245666665 467877764  466788 499999999999999999999


Q ss_pred             EEEcCccCeEEEeeCceEEEEEECCEEEecCCCCCcccCcHHHHHHHHHHHCCCcEEEEEcCHHHHhccceeEEEeccCe
Q 028415           79 LYLDCVHKRYLEEVSSCNIFVVKGNVISTPAIKGTILPGITRKSIIDVAQSQGFQVEERLVTVEELLDADEVFCTGTAVV  158 (209)
Q Consensus        79 llld~~~~g~v~E~s~~Nlf~~~~~~l~TP~~~~~~L~GitR~~vl~~a~~~g~~v~e~~i~~~el~~ade~fl~ns~~g  158 (209)
                      ||+|+  +|+|+|++++|||++++++|+|||++.++|+||||+.|+++|++.|++++|++++++||.+|||+|+|||++|
T Consensus       180 l~ld~--~g~v~E~s~sNif~vk~~~l~TP~~~~~iL~GItR~~vi~~~~~~gi~v~e~~i~~~~L~~AdEvfltns~~g  257 (304)
T d1iyea_         180 IALDV--NGYISEGAGENLFEVKDGVLFTPPFTSSALPGITRDAIIKLAKELGIEVREQVLSRESLYLADEVFMSGTAAE  257 (304)
T ss_dssp             EEECT--TSBEEEETTBEEEEEETTEEEECCGGGTCCCCHHHHHHHHHHHHTTCCEEECCCBTTHHHHCSEEEEEETTTE
T ss_pred             eeecc--cCeEeecCceeEEEEeCCEEEEeecccccCCchHHHHHHHHhhhcccceeeccCCHHHHHhhCHHhhhCCCCe
Confidence            99998  8999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             eEEEEEEEECCeEEEcCCCCccHHHHHHHHHHHHHHhcCcCCCCCCeeeC
Q 028415          159 VSPVGSITYLGKRVSYGEGGFGAVSQQLYSVLTQLQMGLIADKMNWTLEL  208 (209)
Q Consensus       159 i~pV~~i~~~~~~~~~~~g~~g~~t~~L~~~~~~~~~g~~~~~~~w~~~~  208 (209)
                      |+||.+|  |++.+  ++|++||+|++|+++|.++++|+.+|+++|+..|
T Consensus       258 i~PV~~i--d~~~~--~~g~~Gpit~~L~~~~~~i~~g~~~~~~~W~~~v  303 (304)
T d1iyea_         258 ITPVRSV--DGIQV--GEGRCGPVTKRIQQAFFGLFTGETEDKWGWLDQV  303 (304)
T ss_dssp             EEEEEEE--TTEEC--TTSSCCHHHHHHHHHHHGGGTTSSCCCSCCEEEC
T ss_pred             EEEEEEE--CCEEc--CCCCcCHHHHHHHHHHHHHHcCCCCCCCCCCeEC
Confidence            9999999  88876  8999999999999999999999999999999987
>d2a1ha1 e.17.1.1 (A:3-365) Branched-chain aminoacid aminotransferase {Human (Homo sapiens), mitochondrial [TaxId: 9606]} Back     information, alignment and structure
>d1i2ka_ e.17.1.1 (A:) Aminodeoxychorismate lyase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1daaa_ e.17.1.1 (A:) D-aminoacid aminotransferase {Bacillus sp., strain YM-1 [TaxId: 1409]} Back     information, alignment and structure