Citrus Sinensis ID: 028523

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------21
Protein Sequence
MPGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVGGKMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCLISKRIRMEGFLVPDYFHLYPKFLEMMIPRIKEGKIVYVEDKAEGLESAPAALVGLFSGRNVGKQVVEVATE
Secondary Structure (PSIPRED)
cccHHHHHHHHHHcccccccEEEEEccccHHHHHHHHHHHHcccEEEEEcccHHHHHHHHHHccccEEEcccccccHHHHHHHHcccccEEEEcccccHHHHHHHHHHHccccEEEEccccccccccccccccHHHHHHccEEEEEEEEccccccHHHHHHHHHHHHHccccEEEEEHHHHHccHHHHHHHccccccccEEEEEEccc
Secondary Structure Prediction (SSPRO)
ccccEEEEEHHHccccccccEEEEEccccHHHHHHHHHHHHcccEEEEEcccHHHHHHHHHHccccHHEcccccccHHHHHHHHcccccEEEEEcccHHHHHHHHHHHHHcccEEEEHHHHcccccccccccHHHHHHHHHHHEcEEEEccHHHHHHHHHHHHHHHHHcccEEEEEEHHHHHHHcHHHHHHHHccccccEEEEEEccc
Coil and Loop (DISEMBL)
mpgmtayagffevcspkqgeYVFVSAASGAVGQLVGQFAKLVGCYVvgsagskdkVDLLKnkfgfdeafnykeepdlDAALKRYFPEGINIYFENVGGKMLDAVLLNMRIQGRITLCGMIsqynndkpegvhnLTCLISKrirmegflvpdyfhlYPKFLEMMIprikegkivyvedkaeglesaPAALVGLFSGRNVGKQVVEVATE
Flexible Loop (DISEMBL)
MPGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGsagskdkvdLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVGGKMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCLISKRIRMEGFLVPDYFHLYPKFLEMMIPRIKEGKIVYVEDKAEGLESAPAALVGLFSGRNVGKQVVEVATE
Low Complexity Region (SEG)
MPGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVGGKMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCLISKRIRMEGFLVPDYFHLYPKFLEMMIPRIKEGKIVYVEDKAEGLESAPAALVGLFSGRNVGKQVVEVATE
Disordered region (IsUnstruct)
*****AYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVGGKMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCLISKRIRMEGFLVPDYFHLYPKFLEMMIPRIKEGKIVYVEDKAEGLESAPAALVGLFSGRNVGK********
Disordered Region (DISOPRED)
MPGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVGGKMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCLISKRIRMEGFLVPDYFHLYPKFLEMMIPRIKEGKIVYVEDKAEGLESAPAALVGLFSGRNVGKQVVEVAT*
Disordered Region (DISEMBL)
MPGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVGGKMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCLISKRIRMEGFLVPDYFHLYPKFLEMMIPRIKEGKIVYVEDKAEGLESAPAALVGLFSGRNVGKQVVEVATE
Disordered Region (DISPRO)
*PGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVGGKMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCLISKRIRMEGFLVPDYFHLYPKFLEMMIPRIKEGKIVYVEDKAEGLESAPAALVGLFSGRNVGKQVVEVA**
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MPGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVGGKMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCLISKRIRMEGFLVPDYFHLYPKFLEMMIPRIKEGKIVYVEDKAEGLESAPAALVGLFSGRNVGKQVVEVATE
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	208	2.2.26 [Sep-21-2011]
Q6WAU0	342	(+)-pulegone reductase OS	N/A	no	1.0	0.608	0.754	1e-92
Q39173	343	NADP-dependent alkenal do	yes	no	1.0	0.606	0.764	6e-90
Q39172	345	NADP-dependent alkenal do	no	no	1.0	0.602	0.75	5e-88
Q9C0Y6	349	Zinc-type alcohol dehydro	yes	no	0.990	0.590	0.492	5e-49
P97584	329	Prostaglandin reductase 1	yes	no	0.975	0.617	0.475	3e-44
Q91YR9	329	Prostaglandin reductase 1	yes	no	0.971	0.613	0.478	7e-44
Q9EQZ5	329	Prostaglandin reductase 1	yes	no	0.966	0.610	0.480	1e-42
Q3SZJ4	329	Prostaglandin reductase 1	yes	no	0.975	0.617	0.466	1e-42
O34812	339	Putative NADP-dependent o	yes	no	0.990	0.607	0.435	2e-42
Q29073	329	Prostaglandin reductase 1	yes	no	0.975	0.617	0.461	3e-41

>sp|Q6WAU0|PULR_MENPI (+)-pulegone reductase OS=Mentha piperita PE=1 SV=1

 Score =  338 bits (867), Expect = 1e-92,   Method: Compositional matrix adjust.
 Identities = 157/208 (75%), Positives = 188/208 (90%)

Query: 1   MPGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLK 60
           MPGMTAYAGFFE+CSPK+GE VFV+AA+G+VGQLVGQFAK+ GCYVVGSAGSK+KVDLLK
Sbjct: 135 MPGMTAYAGFFEICSPKKGETVFVTAAAGSVGQLVGQFAKMFGCYVVGSAGSKEKVDLLK 194

Query: 61  NKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVGGKMLDAVLLNMRIQGRITLCGMI 120
           NKFGFD+AFNYKEE D D ALKR+FPEGI+IYF+NVGGKML+AV+ NMR+ GRI +CGM+
Sbjct: 195 NKFGFDDAFNYKEESDYDTALKRHFPEGIDIYFDNVGGKMLEAVINNMRVHGRIAVCGMV 254

Query: 121 SQYNNDKPEGVHNLTCLISKRIRMEGFLVPDYFHLYPKFLEMMIPRIKEGKIVYVEDKAE 180
           SQY+  +PEGVHNL  LI K+IRM+GF+V DY+HLYPKFLEM++PRIKEGK+ YVED +E
Sbjct: 255 SQYSLKQPEGVHNLLKLIPKQIRMQGFVVVDYYHLYPKFLEMVLPRIKEGKVTYVEDISE 314

Query: 181 GLESAPAALVGLFSGRNVGKQVVEVATE 208
           GLESAP+AL+G++ GRNVG QVV V+ E
Sbjct: 315 GLESAPSALLGVYVGRNVGNQVVAVSRE 342

Monoterpene synthase that catalyzes the specific reduction of the 4,8-double bond of (+)-pulegone to produce both (-)-menthone and (+)-isomenthone in a 70:30 ratio. Unable to utilize either (-)-isopiperitenone or (+)-cis-isopulegone, or to catalyze the reverse reaction with (-)-menthone or (+)-isomenthone. Has an absolute requirement for NADPH.
Mentha piperita (taxid: 34256)
EC: 1EC: .EC: 3EC: .EC: 1EC: .EC: 8EC: 1

>sp|Q39173|P2_ARATH NADP-dependent alkenal double bond reductase P2 OS=Arabidopsis thaliana GN=P2 PE=2 SV=2

 Score =  330 bits (845), Expect = 6e-90,   Method: Compositional matrix adjust.
 Identities = 159/208 (76%), Positives = 184/208 (88%)

Query: 1   MPGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLK 60
           MPGMTAYAGF+EVCSPK+GE V+VSAASGAVGQLVGQFAK++GCYVVGSAGSK+KVDLLK
Sbjct: 136 MPGMTAYAGFYEVCSPKKGETVYVSAASGAVGQLVGQFAKMMGCYVVGSAGSKEKVDLLK 195

Query: 61  NKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVGGKMLDAVLLNMRIQGRITLCGMI 120
            KFGFD+AFNYKEE DL AALKR FP+GI++YFENVGGKMLDAVLLNM   GRI +CGMI
Sbjct: 196 TKFGFDDAFNYKEESDLSAALKRCFPKGIDMYFENVGGKMLDAVLLNMNPHGRIAVCGMI 255

Query: 121 SQYNNDKPEGVHNLTCLISKRIRMEGFLVPDYFHLYPKFLEMMIPRIKEGKIVYVEDKAE 180
           SQYN +  EGVHNL+ +I KRIR++GF+V D++  YPKFLE+++PRIKEGKI YVED A+
Sbjct: 256 SQYNLENQEGVHNLSNIIYKRIRIQGFVVADFYDKYPKFLELVLPRIKEGKITYVEDVAD 315

Query: 181 GLESAPAALVGLFSGRNVGKQVVEVATE 208
           GLE AP ALVGLF G+NVGKQVV +A E
Sbjct: 316 GLEKAPEALVGLFHGKNVGKQVVVIARE 343

Catalyzes the reduction of the 7-8 double bond of phenylpropanal substrates, such as p-coumaryl aldehyde and coniferyl aldehyde (in vitro). Has activity towards toxic substrates, such as 4-hydroxy-(2E)-nonenal (in vitro) (By similarity). May play a distinct role in plant antioxidant defense and is possibly involved in NAD(P)/NAD(P)h homeostasis.

Arabidopsis thaliana (taxid: 3702)

EC: 1

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: 7

EC: 4

>sp|Q39172|P1_ARATH NADP-dependent alkenal double bond reductase P1 OS=Arabidopsis thaliana GN=P1 PE=1 SV=1

 Score =  323 bits (828), Expect = 5e-88,   Method: Compositional matrix adjust.
 Identities = 156/208 (75%), Positives = 180/208 (86%)

Query: 1   MPGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLK 60
           MPGMTAYAGF+EVCSPK+GE V+VSAASGAVGQLVGQ AK++GCYVVGSAGSK+KVDLLK
Sbjct: 138 MPGMTAYAGFYEVCSPKEGETVYVSAASGAVGQLVGQLAKMMGCYVVGSAGSKEKVDLLK 197

Query: 61  NKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVGGKMLDAVLLNMRIQGRITLCGMI 120
            KFGFD+AFNYKEE DL AALKR FP GI+IYFENVGGKMLDAVL+NM + GRI +CGMI
Sbjct: 198 TKFGFDDAFNYKEESDLTAALKRCFPNGIDIYFENVGGKMLDAVLVNMNMHGRIAVCGMI 257

Query: 121 SQYNNDKPEGVHNLTCLISKRIRMEGFLVPDYFHLYPKFLEMMIPRIKEGKIVYVEDKAE 180
           SQYN +  EGVHNL+ +I KRIR++GF+V D++  Y KFLE ++P I+EGKI YVED A+
Sbjct: 258 SQYNLENQEGVHNLSNIIYKRIRIQGFVVSDFYDKYSKFLEFVLPHIREGKITYVEDVAD 317

Query: 181 GLESAPAALVGLFSGRNVGKQVVEVATE 208
           GLE AP ALVGLF G+NVGKQVV VA E
Sbjct: 318 GLEKAPEALVGLFHGKNVGKQVVVVARE 345

Catalyzes the reduction of the 7-8 double bond of phenylpropanal substrates, such as p-coumaryl aldehyde and coniferyl aldehyde (in vitro). Has activity towards toxic substrates, such as 4-hydroxy-(2E)-nonenal (in vitro). May play a distinct role in plant antioxidant defense and is possibly involved in NAD(P)/NAD(P)H homeostasis.

Arabidopsis thaliana (taxid: 3702)

EC: 1

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: 7

EC: 4

>sp|Q9C0Y6|YKM8_SCHPO Zinc-type alcohol dehydrogenase-like protein PB24D3.08c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAPB24D3.08c PE=3 SV=1

 Score =  194 bits (492), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 103/209 (49%), Positives = 136/209 (65%), Gaps = 3/209 (1%)

Query: 1   MPGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLK 60
           MP  TAY G   +  PK GE +++SAASGAVGQ+ GQ AK +G +VVGS GS +K  +  
Sbjct: 143 MPSQTAYCGLKHIGKPKAGETIYISAASGAVGQMAGQLAKAMGLHVVGSVGSDEKFKICL 202

Query: 61  NKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVGGKMLDAVLLNMRIQGRITLCGMI 120
           +  G+D  FNYK+E    A L R  P+GI+IYFENVGG+ +DAVL NM +QGRI  CG I
Sbjct: 203 DS-GYDSVFNYKKESPFKA-LPRLCPKGIDIYFENVGGETMDAVLENMNLQGRIIFCGAI 260

Query: 121 SQYNNDKPEGVHNLTCLISKRIRMEGFLVPDYFHLYP-KFLEMMIPRIKEGKIVYVEDKA 179
           SQYNN  P  V NL  ++ K + ++GF+V +    Y  ++ E M   I EGKI Y  D  
Sbjct: 261 SQYNNPNPYRVKNLGMVLVKSLTIQGFIVANILPQYQEQYFEEMPKLIAEGKIKYKCDVY 320

Query: 180 EGLESAPAALVGLFSGRNVGKQVVEVATE 208
           +GLESAP A +G+  G+N GK +V++A E
Sbjct: 321 DGLESAPEAFIGMLQGKNSGKTIVKIADE 349

Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812)

EC: 1

EC: .

EC: -

EC: .

EC: -

EC: .

EC: -

>sp|P97584|PTGR1_RAT Prostaglandin reductase 1 OS=Rattus norvegicus GN=Ptgr1 PE=2 SV=3

 Score =  177 bits (450), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 98/206 (47%), Positives = 132/206 (64%), Gaps = 3/206 (1%)

Query: 1   MPGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLK 60
           MPG+TAY G  ++C  K GE V V+AA+GAVG +VGQ AKL GC VVG+AGS +KV  LK
Sbjct: 124 MPGLTAYFGLLDICGLKGGETVLVNAAAGAVGSVVGQIAKLKGCKVVGTAGSDEKVAYLK 183

Query: 61  NKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVGGKMLDAVLLNMRIQGRITLCGMI 120
            K GFD AFNYK    L+ AL+   P+G + YF+NVGG+  + V+L M+  GRI +CG I
Sbjct: 184 -KLGFDVAFNYKTVKSLEEALRTASPDGYDCYFDNVGGEFSNTVILQMKTFGRIAICGAI 242

Query: 121 SQYNNDKP-EGVHNLTCLISKRIRMEGFLVPDYF-HLYPKFLEMMIPRIKEGKIVYVEDK 178
           SQYN   P     +   +I +++RMEGF+V  +   +  K L  ++  + EGKI Y E  
Sbjct: 243 SQYNRTGPCPPGPSPEVIIYQQLRMEGFIVTRWQGEVRQKALTDLMNWVSEGKIRYHEYI 302

Query: 179 AEGLESAPAALVGLFSGRNVGKQVVE 204
            EG E  PAA +G+  G N+GK +V+
Sbjct: 303 TEGFEKMPAAFMGMLKGDNLGKTIVK 328

Functions as 15-oxo-prostaglandin 13-reductase and acts on 15-oxo-PGE1, 15-oxo-PGE2 and 15-oxo-PGE2-alpha. Has no activity towards PGE1, PGE2 and PGE2-alpha. Catalyzes the conversion of leukotriene B4 into its biologically less active metabolite, 12-oxo-leukotriene B4. This is an initial and key step of metabolic inactivation of leukotriene B4.

Rattus norvegicus (taxid: 10116)

EC: 1

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: 7

EC: 4

>sp|Q91YR9|PTGR1_MOUSE Prostaglandin reductase 1 OS=Mus musculus GN=Ptgr1 PE=2 SV=2

 Score =  177 bits (448), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 99/207 (47%), Positives = 133/207 (64%), Gaps = 5/207 (2%)

Query: 1   MPGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLK 60
           MPG+TAY G  ++C  K GE V VSAA+GAVG +VGQ AKL GC VVG+AGS +KV  LK
Sbjct: 124 MPGLTAYFGLLDICGVKGGETVMVSAAAGAVGSVVGQIAKLKGCKVVGTAGSDEKVAYLK 183

Query: 61  NKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVGGKMLDAVLLNMRIQGRITLCGMI 120
            K GFD AFNYK    L+ AL+   P+G + YF+NVGG+  +AV+L M+  GRI +CG I
Sbjct: 184 -KLGFDVAFNYKTVKSLEEALRTASPDGYDCYFDNVGGEFSNAVILQMKTFGRIAICGAI 242

Query: 121 SQYNNDK--PEGVHNLTCLISKRIRMEGFLVPDYF-HLYPKFLEMMIPRIKEGKIVYVED 177
           SQYN     P+G      +I +++RMEGF+V  +   +  K L  ++  + EGK+   E 
Sbjct: 243 SQYNRTGPCPQGPAP-EVVIYQQLRMEGFIVNRWQGEVRQKALTELMNWVSEGKVQCHEY 301

Query: 178 KAEGLESAPAALVGLFSGRNVGKQVVE 204
             EG E  PAA +G+  G N+GK +V+
Sbjct: 302 VTEGFEKMPAAFMGMLKGENLGKTIVK 328

Functions as 15-oxo-prostaglandin 13-reductase and acts on 15-oxo-PGE1, 15-oxo-PGE2 and 15-oxo-PGE2-alpha. Has no activity towards PGE1, PGE2 and PGE2-alpha. Catalyzes the conversion of leukotriene B4 into its biologically less active metabolite, 12-oxo-leukotriene B4. This is an initial and key step of metabolic inactivation of leukotriene B4.

Mus musculus (taxid: 10090)

EC: 1

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: 7

EC: 4

>sp|Q9EQZ5|PTGR1_CAVPO Prostaglandin reductase 1 OS=Cavia porcellus GN=Ptgr1 PE=1 SV=1

 Score =  172 bits (437), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 99/206 (48%), Positives = 134/206 (65%), Gaps = 5/206 (2%)

Query: 1   MPGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLK 60
           MPG+TAY G  EVC  K GE V VSAA+GAVG +VGQ AKL GC VVG+AGS +K+  LK
Sbjct: 124 MPGLTAYFGLLEVCGVKGGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAYLK 183

Query: 61  NKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVGGKMLDAVLLNMRIQGRITLCGMI 120
            + GFD AFNYK    L+ ALK+  P+G + YF+NVGG+ L+ VL  M+  G+I +CG I
Sbjct: 184 -QIGFDAAFNYKTVNSLEEALKKASPDGYDCYFDNVGGEFLNTVLSQMKDFGKIAICGAI 242

Query: 121 SQYN--NDKPEGVHNLTCLISKRIRMEGFLVPDYF-HLYPKFLEMMIPRIKEGKIVYVED 177
           S YN  +  P G  +   +I K++R+EGF+V  +   +  K L  ++  + EGKI Y E 
Sbjct: 243 SVYNRMDQLPPG-PSPESIIYKQLRIEGFIVYRWQGDVREKALRDLMKWVLEGKIQYHEH 301

Query: 178 KAEGLESAPAALVGLFSGRNVGKQVV 203
             +G E+ PAA + + +G N+GK VV
Sbjct: 302 VTKGFENMPAAFIEMLNGANLGKAVV 327

Functions as 15-oxo-prostaglandin 13-reductase and acts on 15-oxo-PGE1, 15-oxo-PGE2 and 15-oxo-PGE2-alpha. Catalyzes the conversion of leukotriene B4 into its biologically less active metabolite, 12-oxo-leukotriene B4. This is an initial and key step of metabolic inactivation of leukotriene B4.

Cavia porcellus (taxid: 10141)

EC: 1

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: 7

EC: 4

>sp|Q3SZJ4|PTGR1_BOVIN Prostaglandin reductase 1 OS=Bos taurus GN=PTGR1 PE=2 SV=1

 Score =  172 bits (436), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 96/206 (46%), Positives = 127/206 (61%), Gaps = 3/206 (1%)

Query: 1   MPGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLK 60
           MPG+TAY G  ++C  K GE V VSAA+GAVG +VGQ AKL GC VVG+AGS +KV  LK
Sbjct: 124 MPGLTAYFGLLDICGVKGGETVLVSAAAGAVGSIVGQIAKLKGCKVVGTAGSDEKVAWLK 183

Query: 61  NKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVGGKMLDAVLLNMRIQGRITLCGMI 120
            K GFD A NYK    L+ ALK   PEG + YF+NVGG+  +  +  M+  GRI +CG I
Sbjct: 184 -KHGFDVALNYKTVKSLEEALKEAAPEGYDCYFDNVGGEFSNVAITQMKKFGRIAICGAI 242

Query: 121 SQYNNDKPEGV-HNLTCLISKRIRMEGFLVPDYF-HLYPKFLEMMIPRIKEGKIVYVEDK 178
           S YN   P     +   +I K + ++GF+V  +   +  K L  ++  + EGKI Y E  
Sbjct: 243 SVYNRTSPLSPGPSPEIIIFKELHLQGFVVYRWQGEVRQKALRDLLKWVSEGKIQYHEHV 302

Query: 179 AEGLESAPAALVGLFSGRNVGKQVVE 204
            EG E+ PAA +GL  G N+GK +V+
Sbjct: 303 TEGFENMPAAFIGLLKGENLGKAIVK 328

Functions as 15-oxo-prostaglandin 13-reductase and acts on 15-oxo-PGE1, 15-oxo-PGE2 and 15-oxo-PGE2-alpha. Has no activity towards PGE1, PGE2 and PGE2-alpha. Catalyzes the conversion of leukotriene B4 into its biologically less active metabolite, 12-oxo-leukotriene B4. This is an initial and key step of metabolic inactivation of leukotriene B4.

Bos taurus (taxid: 9913)

EC: 1

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: 7

EC: 4

>sp|O34812|YFMJ_BACSU Putative NADP-dependent oxidoreductase YfmJ OS=Bacillus subtilis (strain 168) GN=yfmJ PE=2 SV=1

 Score =  172 bits (435), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 91/209 (43%), Positives = 128/209 (61%), Gaps = 3/209 (1%)

Query: 1   MPGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLK 60
           M G+TAY G  ++  PK+GE V VS A+GAVG  VGQ AK+ G  VVG AGS +K+D LK
Sbjct: 128 MTGLTAYFGLLDIGRPKEGETVVVSGAAGAVGSTVGQIAKIKGARVVGIAGSDEKIDYLK 187

Query: 61  NKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVGGKMLDAVLLNMRIQGRITLCGMI 120
            +  FDEA NYK   D+  AL+   P+G+++YF+NVGG + DAV+  +    RI +CG I
Sbjct: 188 QELQFDEAINYKTADDIQKALQNACPDGVDVYFDNVGGPISDAVMNLLNEFARIPVCGAI 247

Query: 121 SQYNNDKPE---GVHNLTCLISKRIRMEGFLVPDYFHLYPKFLEMMIPRIKEGKIVYVED 177
           S YN +      G    + LI  +  M+GF+V DY   + +  + +   +K GK+ Y E 
Sbjct: 248 SSYNAESEADDMGPRVQSKLIKTKSLMQGFIVSDYSDRFSEGAKQLAEWLKAGKLHYEET 307

Query: 178 KAEGLESAPAALVGLFSGRNVGKQVVEVA 206
             EG E+ P A +GLF G N GKQ+++V+
Sbjct: 308 ITEGFENIPDAFLGLFKGENKGKQLIKVS 336

Putative quinone oxidoreductase that may contribute to the degradation of aromatic compounds.

Bacillus subtilis (strain 168) (taxid: 224308)

EC: 1

EC: .

EC: -

EC: .

EC: -

EC: .

EC: -

>sp|Q29073|PTGR1_PIG Prostaglandin reductase 1 OS=Sus scrofa GN=PTGR1 PE=1 SV=1

 Score =  168 bits (425), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 95/206 (46%), Positives = 127/206 (61%), Gaps = 3/206 (1%)

Query: 1   MPGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLK 60
           MPG+TAY G  ++C  K GE V V+AA+GAVG +VGQ AKL GC VVG+AGS +KV  LK
Sbjct: 124 MPGLTAYFGLLDICGLKGGETVMVNAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKVACLK 183

Query: 61  NKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVGGKMLDAVLLNMRIQGRITLCGMI 120
            K+GFD AFNYK    L+  LK+  PEG + YF+NVGG+  +AV   M+  GRI +CG I
Sbjct: 184 -KYGFDVAFNYKTIESLEETLKKASPEGYDCYFDNVGGEFSNAVTSQMKKFGRIAICGAI 242

Query: 121 SQYNNDKPEGVHNLT-CLISKRIRMEGFLVPDYF-HLYPKFLEMMIPRIKEGKIVYVEDK 178
           S YN   P         +I   +  +GF+V  +   +  K L  ++  + EGKI Y E  
Sbjct: 243 STYNRTGPPPPGPPPEVVIYNELCFQGFIVTRWQGEVRQKALRDLLKWVSEGKIQYHEHI 302

Query: 179 AEGLESAPAALVGLFSGRNVGKQVVE 204
            EG E+ PAA +G+  G N+GK +V+
Sbjct: 303 TEGFENMPAAFMGMLKGENLGKAIVK 328

Functions as 15-oxo-prostaglandin 13-reductase and acts on 15-oxo-PGE1, 15-oxo-PGE2 and 15-oxo-PGE2-alpha. Has no activity towards PGE1, PGE2 and PGE2-alpha. Catalyzes the conversion of leukotriene B4 into its biologically less active metabolite, 12-oxo-leukotriene B4. This is an initial and key step of metabolic inactivation of leukotriene B4.

Sus scrofa (taxid: 9823)

EC: 1

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: 7

EC: 4

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	208
308943732	347	alcohol dehydrogenase [Camellia sinensis	1.0	0.599	0.826	3e-97
255577891	345	alcohol dehydrogenase, putative [Ricinus	1.0	0.602	0.817	3e-96
444302246	351	Chain A, X-ray Crystal Structure Of A Do	1.0	0.592	0.822	3e-96
6692816	343	allyl alcohol dehydrogenase [Nicotiana t	1.0	0.606	0.822	4e-96
224117858	348	predicted protein [Populus trichocarpa]	1.0	0.597	0.798	5e-96
225434189	345	PREDICTED: NADP-dependent alkenal double	1.0	0.602	0.802	2e-95
224117874	348	predicted protein [Populus trichocarpa]	1.0	0.597	0.798	3e-95
225434197	345	PREDICTED: NADP-dependent alkenal double	1.0	0.602	0.807	3e-94
342898881	352	ketone/zingerone synthase 2 [Rubus idaeu	1.0	0.590	0.802	4e-94
147792340	364	hypothetical protein VITISV_043826 [Viti	1.0	0.571	0.798	4e-94

>gi|308943732|gb|ADO51748.1| alcohol dehydrogenase [Camellia sinensis]

 Score =  359 bits (922), Expect = 3e-97,   Method: Compositional matrix adjust.
 Identities = 172/208 (82%), Positives = 191/208 (91%)

Query: 1   MPGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLK 60
           M GMTAY GF+E+CSPKQG+YVF+SAASGAVGQLVGQFAKL+GCYVVGSAG+K+KVDLLK
Sbjct: 140 MHGMTAYVGFYEICSPKQGDYVFISAASGAVGQLVGQFAKLLGCYVVGSAGTKEKVDLLK 199

Query: 61  NKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVGGKMLDAVLLNMRIQGRITLCGMI 120
           NKFGFDEAFNYKEE DL+AALKRYFP GINIYFENVGGKMLDAVL NMR+  RI +CGMI
Sbjct: 200 NKFGFDEAFNYKEEKDLEAALKRYFPNGINIYFENVGGKMLDAVLANMRLHSRIAVCGMI 259

Query: 121 SQYNNDKPEGVHNLTCLISKRIRMEGFLVPDYFHLYPKFLEMMIPRIKEGKIVYVEDKAE 180
           SQYN ++PEGVHNL CLI+KR+RMEGF+V DY+HLYPKFLEM++P IK GKI YVED AE
Sbjct: 260 SQYNLERPEGVHNLFCLITKRVRMEGFIVFDYYHLYPKFLEMILPCIKGGKITYVEDVAE 319

Query: 181 GLESAPAALVGLFSGRNVGKQVVEVATE 208
           GLESAPAAL+GLFSGRNVGKQVV VA E
Sbjct: 320 GLESAPAALIGLFSGRNVGKQVVVVARE 347

Source: Camellia sinensis

Species: Camellia sinensis

Genus: Camellia

Family: Theaceae

Order: Ericales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255577891|ref|XP_002529818.1| alcohol dehydrogenase, putative [Ricinus communis] gi|223530695|gb|EEF32567.1| alcohol dehydrogenase, putative [Ricinus communis]

 Score =  356 bits (914), Expect = 3e-96,   Method: Compositional matrix adjust.
 Identities = 170/208 (81%), Positives = 192/208 (92%)

Query: 1   MPGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLK 60
           M G+TAYAGFFEVCSPK+GE+V+VSAASGAVGQLVGQFAK+ GCYVVGSAGSK+KVD+LK
Sbjct: 138 MHGVTAYAGFFEVCSPKKGEFVYVSAASGAVGQLVGQFAKVSGCYVVGSAGSKEKVDMLK 197

Query: 61  NKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVGGKMLDAVLLNMRIQGRITLCGMI 120
           NKFGFD+AFNYKEEPDLDAALKRYFPEGI+IYFENVGG+MLDAVLLNMRI+GRI +CGMI
Sbjct: 198 NKFGFDDAFNYKEEPDLDAALKRYFPEGIDIYFENVGGEMLDAVLLNMRIRGRIAVCGMI 257

Query: 121 SQYNNDKPEGVHNLTCLISKRIRMEGFLVPDYFHLYPKFLEMMIPRIKEGKIVYVEDKAE 180
           SQYN DKPEGVHNL+ +I KRIRMEGFL  D++HLYP  L+M+IP IKEGKIVYVED AE
Sbjct: 258 SQYNLDKPEGVHNLSAIIGKRIRMEGFLAGDFYHLYPNLLDMVIPYIKEGKIVYVEDVAE 317

Query: 181 GLESAPAALVGLFSGRNVGKQVVEVATE 208
           GLE+AP AL+G+F GRNVGKQ+V VA E
Sbjct: 318 GLENAPTALIGIFRGRNVGKQLVVVARE 345

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|444302246|pdb|4HFJ|A Chain A, X-ray Crystal Structure Of A Double Bond Reductase From Nicotiana Tabacum gi|444302247|pdb|4HFJ|B Chain B, X-ray Crystal Structure Of A Double Bond Reductase From Nicotiana Tabacum gi|444302248|pdb|4HFM|A Chain A, X-ray Crystal Structure Of A Nadp(h)-bound Double Bond Reductase From Nicotiana Tabacum gi|444302249|pdb|4HFM|B Chain B, X-ray Crystal Structure Of A Nadp(h)-bound Double Bond Reductase From Nicotiana Tabacum gi|444302250|pdb|4HFN|A Chain A, X-ray Crystal Structure Of A Ternary Complex Of Double Bond Reductase From Nicotiana Tabacum gi|444302251|pdb|4HFN|B Chain B, X-ray Crystal Structure Of A Ternary Complex Of Double Bond Reductase From Nicotiana Tabacum

 Score =  356 bits (913), Expect = 3e-96,   Method: Compositional matrix adjust.
 Identities = 171/208 (82%), Positives = 192/208 (92%)

Query: 1   MPGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLK 60
           MPGMTAYAGF EVCSPK+GE VFVSAASGAVGQLVGQFAK++GCYVVGSAGSK+KVDLLK
Sbjct: 136 MPGMTAYAGFHEVCSPKKGETVFVSAASGAVGQLVGQFAKMLGCYVVGSAGSKEKVDLLK 195

Query: 61  NKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVGGKMLDAVLLNMRIQGRITLCGMI 120
           +KFGFDEAFNYKEE DL AALKRYFP+GI+IYFENVGGKMLDAVL+NM++ GRI +CGMI
Sbjct: 196 SKFGFDEAFNYKEEQDLSAALKRYFPDGIDIYFENVGGKMLDAVLVNMKLYGRIAVCGMI 255

Query: 121 SQYNNDKPEGVHNLTCLISKRIRMEGFLVPDYFHLYPKFLEMMIPRIKEGKIVYVEDKAE 180
           SQYN ++ EGVHNL CLI+KRIRMEGFLV DY+HLYPK+LEM+IP+IK GK+VYVED A 
Sbjct: 256 SQYNLEQTEGVHNLFCLITKRIRMEGFLVFDYYHLYPKYLEMVIPQIKAGKVVYVEDVAH 315

Query: 181 GLESAPAALVGLFSGRNVGKQVVEVATE 208
           GLESAP ALVGLFSGRN+GKQVV V+ E
Sbjct: 316 GLESAPTALVGLFSGRNIGKQVVMVSRE 343

Source: Nicotiana tabacum

Species: Nicotiana tabacum

Genus: Nicotiana

Family: Solanaceae

Order: Solanales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|6692816|dbj|BAA89423.1| allyl alcohol dehydrogenase [Nicotiana tabacum]

 Score =  356 bits (913), Expect = 4e-96,   Method: Compositional matrix adjust.
 Identities = 171/208 (82%), Positives = 192/208 (92%)

Query: 1   MPGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLK 60
           MPGMTAYAGF EVCSPK+GE VFVSAASGAVGQLVGQFAK++GCYVVGSAGSK+KVDLLK
Sbjct: 136 MPGMTAYAGFHEVCSPKKGETVFVSAASGAVGQLVGQFAKMLGCYVVGSAGSKEKVDLLK 195

Query: 61  NKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVGGKMLDAVLLNMRIQGRITLCGMI 120
           +KFGFDEAFNYKEE DL AALKRYFP+GI+IYFENVGGKMLDAVL+NM++ GRI +CGMI
Sbjct: 196 SKFGFDEAFNYKEEQDLSAALKRYFPDGIDIYFENVGGKMLDAVLVNMKLYGRIAVCGMI 255

Query: 121 SQYNNDKPEGVHNLTCLISKRIRMEGFLVPDYFHLYPKFLEMMIPRIKEGKIVYVEDKAE 180
           SQYN ++ EGVHNL CLI+KRIRMEGFLV DY+HLYPK+LEM+IP+IK GK+VYVED A 
Sbjct: 256 SQYNLEQTEGVHNLFCLITKRIRMEGFLVFDYYHLYPKYLEMVIPQIKAGKVVYVEDVAH 315

Query: 181 GLESAPAALVGLFSGRNVGKQVVEVATE 208
           GLESAP ALVGLFSGRN+GKQVV V+ E
Sbjct: 316 GLESAPTALVGLFSGRNIGKQVVMVSRE 343

Source: Nicotiana tabacum

Species: Nicotiana tabacum

Genus: Nicotiana

Family: Solanaceae

Order: Solanales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224117858|ref|XP_002331649.1| predicted protein [Populus trichocarpa] gi|222874045|gb|EEF11176.1| predicted protein [Populus trichocarpa]

 Score =  355 bits (912), Expect = 5e-96,   Method: Compositional matrix adjust.
 Identities = 166/208 (79%), Positives = 196/208 (94%)

Query: 1   MPGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLK 60
           MPG+TAYAGF+E+CSPK+GE+VF+SAASGAVGQLVGQFAKL+GCYVVGSAGSKDKVDLLK
Sbjct: 141 MPGLTAYAGFYEICSPKKGEFVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLK 200

Query: 61  NKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVGGKMLDAVLLNMRIQGRITLCGMI 120
           NKFGFD+AFNYKEE DLDAALKRYFP+GI+IYFENVGGKMLDAV+LNMR++GRI++CGM+
Sbjct: 201 NKFGFDDAFNYKEELDLDAALKRYFPDGIDIYFENVGGKMLDAVVLNMRVRGRISVCGMV 260

Query: 121 SQYNNDKPEGVHNLTCLISKRIRMEGFLVPDYFHLYPKFLEMMIPRIKEGKIVYVEDKAE 180
           SQYN ++PEGVHNL  L+ KRI MEGFLV D+FHL+PK+L+M++P IK+GKIVYVED AE
Sbjct: 261 SQYNLEQPEGVHNLMHLVPKRIHMEGFLVYDFFHLFPKYLDMVLPYIKQGKIVYVEDIAE 320

Query: 181 GLESAPAALVGLFSGRNVGKQVVEVATE 208
           GLE+APAAL GLF+GRN+GKQVV V+ E
Sbjct: 321 GLENAPAALTGLFAGRNIGKQVVAVSHE 348

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225434189|ref|XP_002279359.1| PREDICTED: NADP-dependent alkenal double bond reductase P2 [Vitis vinifera] gi|147792339|emb|CAN61471.1| hypothetical protein VITISV_043825 [Vitis vinifera]

 Score =  353 bits (907), Expect = 2e-95,   Method: Compositional matrix adjust.
 Identities = 167/208 (80%), Positives = 193/208 (92%)

Query: 1   MPGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLK 60
           M GMTAY+GF+E+CSPK+GEYVF+SAASGAVGQLVGQFAKL+GCYVVGSAG+K+KVDLLK
Sbjct: 138 MAGMTAYSGFYEICSPKKGEYVFISAASGAVGQLVGQFAKLLGCYVVGSAGTKEKVDLLK 197

Query: 61  NKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVGGKMLDAVLLNMRIQGRITLCGMI 120
           NKFGFDEAFNYKEE DL+A LKRYFPEGI+IYFENVGGKMLDAVL+NMR+ GRI +CGMI
Sbjct: 198 NKFGFDEAFNYKEEQDLEACLKRYFPEGIDIYFENVGGKMLDAVLVNMRLHGRIAVCGMI 257

Query: 121 SQYNNDKPEGVHNLTCLISKRIRMEGFLVPDYFHLYPKFLEMMIPRIKEGKIVYVEDKAE 180
           SQYN ++PEGV NL  +++KRIRMEGFLV DY+HLYPKFL++++P I+EGKIVYVED AE
Sbjct: 258 SQYNLEEPEGVRNLFTIVTKRIRMEGFLVFDYYHLYPKFLDLIMPYIREGKIVYVEDIAE 317

Query: 181 GLESAPAALVGLFSGRNVGKQVVEVATE 208
           GLESAP AL+GL+SGRNVGKQVV VA E
Sbjct: 318 GLESAPTALIGLYSGRNVGKQVVVVARE 345

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224117874|ref|XP_002331653.1| predicted protein [Populus trichocarpa] gi|222874049|gb|EEF11180.1| predicted protein [Populus trichocarpa]

 Score =  353 bits (905), Expect = 3e-95,   Method: Compositional matrix adjust.
 Identities = 166/208 (79%), Positives = 195/208 (93%)

Query: 1   MPGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLK 60
           MPGMTAYAGF+E+CSPK+GE+VF+SAASGAVGQLVGQFAKL+GCYVVGSAGSKDKVDLLK
Sbjct: 141 MPGMTAYAGFYEICSPKKGEFVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLK 200

Query: 61  NKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVGGKMLDAVLLNMRIQGRITLCGMI 120
           NKFGFD+AFNYKEE DLDAALKRYFP+GI+IYFENVGGK+LDAVLLNMR++GRI++CGM+
Sbjct: 201 NKFGFDDAFNYKEELDLDAALKRYFPDGIDIYFENVGGKILDAVLLNMRVRGRISVCGMV 260

Query: 121 SQYNNDKPEGVHNLTCLISKRIRMEGFLVPDYFHLYPKFLEMMIPRIKEGKIVYVEDKAE 180
           SQYN ++PEGVHNL  L+ KRI MEGFLV  +FHL+PK+L+M++P IK+GKIVYVED AE
Sbjct: 261 SQYNLEQPEGVHNLMHLVLKRIHMEGFLVYYFFHLFPKYLDMVLPYIKQGKIVYVEDIAE 320

Query: 181 GLESAPAALVGLFSGRNVGKQVVEVATE 208
           GLE+APAAL GLF+GRN+GKQVV V+ E
Sbjct: 321 GLENAPAALTGLFAGRNIGKQVVAVSRE 348

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225434197|ref|XP_002279529.1| PREDICTED: NADP-dependent alkenal double bond reductase P2 [Vitis vinifera] gi|147783628|emb|CAN68149.1| hypothetical protein VITISV_035666 [Vitis vinifera]

 Score =  349 bits (896), Expect = 3e-94,   Method: Compositional matrix adjust.
 Identities = 168/208 (80%), Positives = 188/208 (90%)

Query: 1   MPGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLK 60
           MPG+TAYAGF+E+CSPK+GEYV+VSAASGAVGQLVGQFAKL+GCYVVGSAGSK+KVDLLK
Sbjct: 138 MPGITAYAGFYEICSPKKGEYVYVSAASGAVGQLVGQFAKLIGCYVVGSAGSKEKVDLLK 197

Query: 61  NKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVGGKMLDAVLLNMRIQGRITLCGMI 120
           NKFGFDEAFNYKEE DL A LKRYFPEGI+IYFENVGG MLDAVL NMR+QGRI  CGMI
Sbjct: 198 NKFGFDEAFNYKEEQDLVACLKRYFPEGIDIYFENVGGPMLDAVLANMRVQGRIAACGMI 257

Query: 121 SQYNNDKPEGVHNLTCLISKRIRMEGFLVPDYFHLYPKFLEMMIPRIKEGKIVYVEDKAE 180
           SQYN DKP GV+NL  +I K+I+M+GF+   YFHLYPKFLEM++P +KEGK+VYVED AE
Sbjct: 258 SQYNLDKPVGVYNLMNIIKKQIKMQGFVAGSYFHLYPKFLEMILPHVKEGKVVYVEDIAE 317

Query: 181 GLESAPAALVGLFSGRNVGKQVVEVATE 208
           GLESAP AL+GLFSGRNVGKQVV VA E
Sbjct: 318 GLESAPQALIGLFSGRNVGKQVVLVARE 345

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|342898881|gb|AEL78826.1| ketone/zingerone synthase 2 [Rubus idaeus]

 Score =  349 bits (896), Expect = 4e-94,   Method: Compositional matrix adjust.
 Identities = 167/208 (80%), Positives = 189/208 (90%)

Query: 1   MPGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLK 60
           MPGMTAYAGF+EVCSPK+GE V++SAASGAVGQLVGQFAKL GCYVVGSAG+K+KVDLLK
Sbjct: 145 MPGMTAYAGFYEVCSPKKGETVYISAASGAVGQLVGQFAKLSGCYVVGSAGTKEKVDLLK 204

Query: 61  NKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVGGKMLDAVLLNMRIQGRITLCGMI 120
           NKFGFDEAFNYKEEP+LDAALKRYFPEGI+IYFENVGGKMLDAVLLNMR +GRI +CGMI
Sbjct: 205 NKFGFDEAFNYKEEPNLDAALKRYFPEGIDIYFENVGGKMLDAVLLNMRFRGRIAVCGMI 264

Query: 121 SQYNNDKPEGVHNLTCLISKRIRMEGFLVPDYFHLYPKFLEMMIPRIKEGKIVYVEDKAE 180
           SQYN +KPEGV NL  LI K +R++GF V +Y+HLY KFLEM++P IKEGKI YVED  E
Sbjct: 265 SQYNLEKPEGVQNLMSLIYKEVRIQGFGVLNYYHLYEKFLEMVLPAIKEGKITYVEDVVE 324

Query: 181 GLESAPAALVGLFSGRNVGKQVVEVATE 208
           GLESAP+AL+GLF+GRNVGKQVV V+ E
Sbjct: 325 GLESAPSALIGLFTGRNVGKQVVVVSRE 352

Source: Rubus idaeus

Species: Rubus idaeus

Genus: Rubus

Family: Rosaceae

Order: Rosales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147792340|emb|CAN61472.1| hypothetical protein VITISV_043826 [Vitis vinifera]

 Score =  349 bits (896), Expect = 4e-94,   Method: Compositional matrix adjust.
 Identities = 166/208 (79%), Positives = 188/208 (90%)

Query: 1   MPGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLK 60
           MPG+TAYAGF+E+C+PK+GEYV+VSAASGAVGQLVGQFAKL+GCYVVGSAGSK+KVDLLK
Sbjct: 157 MPGLTAYAGFYEICTPKKGEYVYVSAASGAVGQLVGQFAKLLGCYVVGSAGSKEKVDLLK 216

Query: 61  NKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVGGKMLDAVLLNMRIQGRITLCGMI 120
           NKFGFDEAFNYKEE DL A LKRYFPEGI+IYF+NVGGKMLDAVLLNMR+ GRI  CGMI
Sbjct: 217 NKFGFDEAFNYKEETDLVACLKRYFPEGIDIYFDNVGGKMLDAVLLNMRVHGRIAACGMI 276

Query: 121 SQYNNDKPEGVHNLTCLISKRIRMEGFLVPDYFHLYPKFLEMMIPRIKEGKIVYVEDKAE 180
           SQYN DK EGV NL  +I K++RM+GF++  Y+HLYPK+LEM++P IKEGKIVYVED  E
Sbjct: 277 SQYNLDKLEGVCNLINIIIKQVRMQGFVITSYYHLYPKYLEMVLPHIKEGKIVYVEDTVE 336

Query: 181 GLESAPAALVGLFSGRNVGKQVVEVATE 208
           GLESAP AL+GLFSGRNVGKQVV VA E
Sbjct: 337 GLESAPQALIGLFSGRNVGKQVVVVARE 364

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	208
UNIPROTKB|Q6WAU0	342	Q6WAU0 "(+)-pulegone reductase	1.0	0.608	0.754	1.8e-85
TAIR|locus:2148166	343	AT5G16990 [Arabidopsis thalian	1.0	0.606	0.764	9.1e-84
TAIR|locus:2097795	350	AT3G03080 [Arabidopsis thalian	1.0	0.594	0.745	2.8e-82
TAIR|locus:2148131	345	AER "alkenal reductase" [Arabi	1.0	0.602	0.75	1.2e-81
TAIR|locus:2028736	351	AT1G26320 [Arabidopsis thalian	1.0	0.592	0.740	2e-81
TAIR|locus:2148186	345	AT5G17000 [Arabidopsis thalian	1.0	0.602	0.75	2e-81
TAIR|locus:2148116	346	AT5G16960 [Arabidopsis thalian	0.990	0.595	0.752	1.8e-80
TAIR|locus:2153759	353	AT5G37980 [Arabidopsis thalian	1.0	0.589	0.716	2.6e-79
TAIR|locus:2153799	353	AT5G37940 [Arabidopsis thalian	1.0	0.589	0.701	1.4e-78
TAIR|locus:2154041	353	AT5G38000 [Arabidopsis thalian	0.990	0.583	0.689	9e-77

UNIPROTKB|Q6WAU0 Q6WAU0 "(+)-pulegone reductase" [Mentha x piperita (taxid:34256)]

 Score = 855 (306.0 bits), Expect = 1.8e-85, P = 1.8e-85
 Identities = 157/208 (75%), Positives = 188/208 (90%)

Query:     1 MPGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLK 60
             MPGMTAYAGFFE+CSPK+GE VFV+AA+G+VGQLVGQFAK+ GCYVVGSAGSK+KVDLLK
Sbjct:   135 MPGMTAYAGFFEICSPKKGETVFVTAAAGSVGQLVGQFAKMFGCYVVGSAGSKEKVDLLK 194

Query:    61 NKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVGGKMLDAVLLNMRIQGRITLCGMI 120
             NKFGFD+AFNYKEE D D ALKR+FPEGI+IYF+NVGGKML+AV+ NMR+ GRI +CGM+
Sbjct:   195 NKFGFDDAFNYKEESDYDTALKRHFPEGIDIYFDNVGGKMLEAVINNMRVHGRIAVCGMV 254

Query:   121 SQYNNDKPEGVHNLTCLISKRIRMEGFLVPDYFHLYPKFLEMMIPRIKEGKIVYVEDKAE 180
             SQY+  +PEGVHNL  LI K+IRM+GF+V DY+HLYPKFLEM++PRIKEGK+ YVED +E
Sbjct:   255 SQYSLKQPEGVHNLLKLIPKQIRMQGFVVVDYYHLYPKFLEMVLPRIKEGKVTYVEDISE 314

Query:   181 GLESAPAALVGLFSGRNVGKQVVEVATE 208
             GLESAP+AL+G++ GRNVG QVV V+ E
Sbjct:   315 GLESAPSALLGVYVGRNVGNQVVAVSRE 342

GO:0042214 "terpene metabolic process" evidence=IDA

GO:0052579 "(+)-pulegone reductase, (+)-isomenthone as substrate, activity" evidence=IDA

GO:0052580 "(+)-pulegone reductase, (-)-menthone as substrate, activity" evidence=IDA

GO:0070402 "NADPH binding" evidence=IDA

TAIR|locus:2148166 AT5G16990 [Arabidopsis thaliana (taxid:3702)]

 Score = 839 (300.4 bits), Expect = 9.1e-84, P = 9.1e-84
 Identities = 159/208 (76%), Positives = 184/208 (88%)

Query:     1 MPGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLK 60
             MPGMTAYAGF+EVCSPK+GE V+VSAASGAVGQLVGQFAK++GCYVVGSAGSK+KVDLLK
Sbjct:   136 MPGMTAYAGFYEVCSPKKGETVYVSAASGAVGQLVGQFAKMMGCYVVGSAGSKEKVDLLK 195

Query:    61 NKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVGGKMLDAVLLNMRIQGRITLCGMI 120
              KFGFD+AFNYKEE DL AALKR FP+GI++YFENVGGKMLDAVLLNM   GRI +CGMI
Sbjct:   196 TKFGFDDAFNYKEESDLSAALKRCFPKGIDMYFENVGGKMLDAVLLNMNPHGRIAVCGMI 255

Query:   121 SQYNNDKPEGVHNLTCLISKRIRMEGFLVPDYFHLYPKFLEMMIPRIKEGKIVYVEDKAE 180
             SQYN +  EGVHNL+ +I KRIR++GF+V D++  YPKFLE+++PRIKEGKI YVED A+
Sbjct:   256 SQYNLENQEGVHNLSNIIYKRIRIQGFVVADFYDKYPKFLELVLPRIKEGKITYVEDVAD 315

Query:   181 GLESAPAALVGLFSGRNVGKQVVEVATE 208
             GLE AP ALVGLF G+NVGKQVV +A E
Sbjct:   316 GLEKAPEALVGLFHGKNVGKQVVVIARE 343

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0005886 "plasma membrane" evidence=IDA

GO:0005829 "cytosol" evidence=IDA

GO:0006979 "response to oxidative stress" evidence=IGI;IEP

TAIR|locus:2097795 AT3G03080 [Arabidopsis thaliana (taxid:3702)]

 Score = 825 (295.5 bits), Expect = 2.8e-82, P = 2.8e-82
 Identities = 155/208 (74%), Positives = 183/208 (87%)

Query:     1 MPGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLK 60
             MPGMTAYAGF+E+CSPK+GE VFVSAASGAVGQLVGQFAK++GCYVVGSAGS +KVDLLK
Sbjct:   143 MPGMTAYAGFYEICSPKKGETVFVSAASGAVGQLVGQFAKIMGCYVVGSAGSNEKVDLLK 202

Query:    61 NKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVGGKMLDAVLLNMRIQGRITLCGMI 120
             NKFGFD+AFNYK EPDL+AALKR FPEGI+IYFENVGGKMLDAVLLNM++ GRI +CGMI
Sbjct:   203 NKFGFDDAFNYKAEPDLNAALKRCFPEGIDIYFENVGGKMLDAVLLNMKLHGRIAVCGMI 262

Query:   121 SQYNNDKPEGVHNLTCLISKRIRMEGFLVPDYFHLYPKFLEMMIPRIKEGKIVYVEDKAE 180
             SQYN +  EGVHNL  +I KRIR++GF+V DYF  + KFL+ ++P I+EGKI YVED  E
Sbjct:   263 SQYNLEDQEGVHNLANVIYKRIRIKGFVVSDYFDKHLKFLDFVLPYIREGKITYVEDVVE 322

Query:   181 GLESAPAALVGLFSGRNVGKQVVEVATE 208
             GLE+ P+AL+GLF G+NVGKQ++ VA E
Sbjct:   323 GLENGPSALLGLFHGKNVGKQLIAVARE 350

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0009827 "plant-type cell wall modification" evidence=RCA

GO:0009860 "pollen tube growth" evidence=RCA

GO:0030036 "actin cytoskeleton organization" evidence=RCA

GO:0030048 "actin filament-based movement" evidence=RCA

TAIR|locus:2148131 AER "alkenal reductase" [Arabidopsis thaliana (taxid:3702)]

 Score = 819 (293.4 bits), Expect = 1.2e-81, P = 1.2e-81
 Identities = 156/208 (75%), Positives = 180/208 (86%)

Query:     1 MPGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLK 60
             MPGMTAYAGF+EVCSPK+GE V+VSAASGAVGQLVGQ AK++GCYVVGSAGSK+KVDLLK
Sbjct:   138 MPGMTAYAGFYEVCSPKEGETVYVSAASGAVGQLVGQLAKMMGCYVVGSAGSKEKVDLLK 197

Query:    61 NKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVGGKMLDAVLLNMRIQGRITLCGMI 120
              KFGFD+AFNYKEE DL AALKR FP GI+IYFENVGGKMLDAVL+NM + GRI +CGMI
Sbjct:   198 TKFGFDDAFNYKEESDLTAALKRCFPNGIDIYFENVGGKMLDAVLVNMNMHGRIAVCGMI 257

Query:   121 SQYNNDKPEGVHNLTCLISKRIRMEGFLVPDYFHLYPKFLEMMIPRIKEGKIVYVEDKAE 180
             SQYN +  EGVHNL+ +I KRIR++GF+V D++  Y KFLE ++P I+EGKI YVED A+
Sbjct:   258 SQYNLENQEGVHNLSNIIYKRIRIQGFVVSDFYDKYSKFLEFVLPHIREGKITYVEDVAD 317

Query:   181 GLESAPAALVGLFSGRNVGKQVVEVATE 208
             GLE AP ALVGLF G+NVGKQVV VA E
Sbjct:   318 GLEKAPEALVGLFHGKNVGKQVVVVARE 345

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0016747 "transferase activity, transferring acyl groups other than amino-acyl groups" evidence=IEA

GO:0005634 "nucleus" evidence=IDA

GO:0005829 "cytosol" evidence=IDA

GO:0006979 "response to oxidative stress" evidence=IGI;IEP;IMP

GO:0032440 "2-alkenal reductase [NAD(P)

GO:0046686 "response to cadmium ion" evidence=IEP

GO:0006865 "amino acid transport" evidence=RCA

GO:0009407 "toxin catabolic process" evidence=RCA

GO:0010583 "response to cyclopentenone" evidence=RCA

GO:0015824 "proline transport" evidence=RCA

TAIR|locus:2028736 AT1G26320 [Arabidopsis thaliana (taxid:3702)]

 Score = 817 (292.7 bits), Expect = 2.0e-81, P = 2.0e-81
 Identities = 154/208 (74%), Positives = 180/208 (86%)

Query:     1 MPGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLK 60
             MPGMTAYAGF+EVCSPK+GE VFVSAASGAVGQLVGQFAKL+GCYVVGSAGSK+KV LLK
Sbjct:   144 MPGMTAYAGFYEVCSPKKGETVFVSAASGAVGQLVGQFAKLMGCYVVGSAGSKEKVYLLK 203

Query:    61 NKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVGGKMLDAVLLNMRIQGRITLCGMI 120
              KFGFD+AFNYKEE D  AALKRYFPEGI+IYFENVGGKMLDAVL+NM++ GR+ +CGMI
Sbjct:   204 TKFGFDDAFNYKEEKDFSAALKRYFPEGIDIYFENVGGKMLDAVLINMKLHGRVAVCGMI 263

Query:   121 SQYNNDKPEGVHNLTCLISKRIRMEGFLVPDYFHLYPKFLEMMIPRIKEGKIVYVEDKAE 180
             SQYN   PEGVHNL  ++ KRI+++GF V D++  YPKFL+ ++P I+EGKI YVED AE
Sbjct:   264 SQYNLVDPEGVHNLPTILYKRIQLQGFGVCDFYDKYPKFLDFVLPYIREGKITYVEDIAE 323

Query:   181 GLESAPAALVGLFSGRNVGKQVVEVATE 208
             G ES P+AL+GLF G+NVGKQ+  VA E
Sbjct:   324 GFESGPSALLGLFEGKNVGKQLFVVARE 351

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0006979 "response to oxidative stress" evidence=IEP

TAIR|locus:2148186 AT5G17000 [Arabidopsis thaliana (taxid:3702)]

 Score = 817 (292.7 bits), Expect = 2.0e-81, P = 2.0e-81
 Identities = 156/208 (75%), Positives = 178/208 (85%)

Query:     1 MPGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLK 60
             MPGMTAYAGF+EVCSPK+GE V+VSAASGAVGQLVGQFAK++GCYVVGSAGS +KVDLLK
Sbjct:   138 MPGMTAYAGFYEVCSPKEGETVYVSAASGAVGQLVGQFAKMMGCYVVGSAGSTEKVDLLK 197

Query:    61 NKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVGGKMLDAVLLNMRIQGRITLCGMI 120
              KFGFD+AFNYKEEPDL AALKR FP GI+IYFENVGGKMLDAVLLNM   GRI +CGMI
Sbjct:   198 TKFGFDDAFNYKEEPDLSAALKRCFPTGIDIYFENVGGKMLDAVLLNMNPHGRIAVCGMI 257

Query:   121 SQYNNDKPEGVHNLTCLISKRIRMEGFLVPDYFHLYPKFLEMMIPRIKEGKIVYVEDKAE 180
             SQYN +  EGVHNL+ +I KRIR++GF V D++  Y KFL+ ++P IKEGKI YVED A+
Sbjct:   258 SQYNLENQEGVHNLSNIIYKRIRIQGFAVFDFYEKYSKFLDFVLPHIKEGKITYVEDVAD 317

Query:   181 GLESAPAALVGLFSGRNVGKQVVEVATE 208
             GLE  P ALVGLF G+NVGKQVV +A E
Sbjct:   318 GLEKGPEALVGLFHGKNVGKQVVVIARE 345

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0006865 "amino acid transport" evidence=RCA

GO:0015824 "proline transport" evidence=RCA

GO:0006979 "response to oxidative stress" evidence=IEP

TAIR|locus:2148116 AT5G16960 [Arabidopsis thaliana (taxid:3702)]

 Score = 808 (289.5 bits), Expect = 1.8e-80, P = 1.8e-80
 Identities = 155/206 (75%), Positives = 178/206 (86%)

Query:     1 MPGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLK 60
             MPGMTAY GF+E+C+PK+G+ VFVSAASGAVGQLVGQFAKL+GCYVVGSAGSK+KVDLLK
Sbjct:   139 MPGMTAYVGFYEICTPKKGDTVFVSAASGAVGQLVGQFAKLMGCYVVGSAGSKEKVDLLK 198

Query:    61 NKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVGGKMLDAVLLNMRIQGRITLCGMI 120
             NKFGFD+AFNYKEE +L  ALKR FPEGI+IYFENVGGKMLDAV+LNMR  GRI  CGMI
Sbjct:   199 NKFGFDDAFNYKEEHNLIGALKRCFPEGIDIYFENVGGKMLDAVILNMRPHGRIAACGMI 258

Query:   121 SQYNNDKPEGVHNLTCLISKRIRMEGFLVPDYFHLYPKFLEMMIPRIKEGKIVYVEDKAE 180
             SQYN   PEG++ L+ +  KRIR+EGF   DYFH Y +FLE ++P IKEGKI YVED A+
Sbjct:   259 SQYNLKNPEGIYGLSLITYKRIRIEGFNCFDYFHKYSEFLEFVVPYIKEGKIKYVEDVAD 318

Query:   181 GLESAPAALVGLFSGRNVGKQVVEVA 206
             GLESAPAALVGLF G+NVGKQ+V V+
Sbjct:   319 GLESAPAALVGLFHGKNVGKQLVVVS 344

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0006979 "response to oxidative stress" evidence=IEP

TAIR|locus:2153759 AT5G37980 [Arabidopsis thaliana (taxid:3702)]

 Score = 797 (285.6 bits), Expect = 2.6e-79, P = 2.6e-79
 Identities = 149/208 (71%), Positives = 176/208 (84%)

Query:     1 MPGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLK 60
             +PG+TAY GF+E+CSPK+GE VFVSAASGAVGQLVGQFAK+ GCYVVGSA SK+KVDLLK
Sbjct:   146 IPGLTAYVGFYEICSPKKGETVFVSAASGAVGQLVGQFAKMAGCYVVGSASSKEKVDLLK 205

Query:    61 NKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVGGKMLDAVLLNMRIQGRITLCGMI 120
              KFG+DEAFNYKEE DL AALKR FPEGI+IYFENVGGKMLDAVL NMR  GRI  CGMI
Sbjct:   206 TKFGYDEAFNYKEEHDLSAALKRCFPEGIDIYFENVGGKMLDAVLENMRTHGRIAACGMI 265

Query:   121 SQYNNDKPEGVHNLTCLISKRIRMEGFLVPDYFHLYPKFLEMMIPRIKEGKIVYVEDKAE 180
             SQYN  +PEGVHNL  ++ KRIR++GF   ++F  Y KFL+ ++P ++EGKI YVED A+
Sbjct:   266 SQYNLKEPEGVHNLASIVYKRIRVQGFAAVEFFDKYSKFLDFILPYVREGKITYVEDIAQ 325

Query:   181 GLESAPAALVGLFSGRNVGKQVVEVATE 208
             GLE+ P+AL+GLF G+NVGKQ+V VA E
Sbjct:   326 GLENGPSALIGLFHGKNVGKQLVAVARE 353

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0009506 "plasmodesma" evidence=IDA

GO:0006979 "response to oxidative stress" evidence=IEP

TAIR|locus:2153799 AT5G37940 [Arabidopsis thaliana (taxid:3702)]

 Score = 790 (283.2 bits), Expect = 1.4e-78, P = 1.4e-78
 Identities = 146/208 (70%), Positives = 175/208 (84%)

Query:     1 MPGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLK 60
             +PG+TAY GF+E+CSPK+GE VFVSAASGAVGQLVGQFAK+ GCYVVGSA SK+KVDLLK
Sbjct:   146 IPGLTAYVGFYEICSPKKGETVFVSAASGAVGQLVGQFAKMAGCYVVGSASSKEKVDLLK 205

Query:    61 NKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVGGKMLDAVLLNMRIQGRITLCGMI 120
              KFG+D+AFNYKEE DL AALKR FPEGI+IYFENVGGKMLDAVL NMR  GRI  CGMI
Sbjct:   206 TKFGYDDAFNYKEEKDLSAALKRCFPEGIDIYFENVGGKMLDAVLQNMRTHGRIAACGMI 265

Query:   121 SQYNNDKPEGVHNLTCLISKRIRMEGFLVPDYFHLYPKFLEMMIPRIKEGKIVYVEDKAE 180
             SQYN  +PEG+HN   ++ KRIR++ F   ++F  Y KFL+ ++P ++EGKI YVED A+
Sbjct:   266 SQYNLKEPEGLHNTATIVHKRIRVQDFAAVEFFDRYSKFLDFILPHVREGKITYVEDIAQ 325

Query:   181 GLESAPAALVGLFSGRNVGKQVVEVATE 208
             GLE+ P+AL+GLF G+NVGKQ+VEVA E
Sbjct:   326 GLENGPSALIGLFHGKNVGKQLVEVARE 353

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0006979 "response to oxidative stress" evidence=IEP

TAIR|locus:2154041 AT5G38000 [Arabidopsis thaliana (taxid:3702)]

 Score = 773 (277.2 bits), Expect = 9.0e-77, P = 9.0e-77
 Identities = 142/206 (68%), Positives = 174/206 (84%)

Query:     1 MPGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLK 60
             +PG+TAY GF+E+CSPK+GE VFVSAASGAVGQLVGQFAK+ GCYVVGSA S++KVDLLK
Sbjct:   146 IPGLTAYIGFYEICSPKKGETVFVSAASGAVGQLVGQFAKMAGCYVVGSASSEEKVDLLK 205

Query:    61 NKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVGGKMLDAVLLNMRIQGRITLCGMI 120
              KFG+D+AFNYKEE DL AALKR FPEGI+IYFENVGGKML+AVL NMR  GRI  CGMI
Sbjct:   206 TKFGYDDAFNYKEEKDLSAALKRCFPEGIDIYFENVGGKMLEAVLENMRTHGRIAACGMI 265

Query:   121 SQYNNDKPEGVHNLTCLISKRIRMEGFLVPDYFHLYPKFLEMMIPRIKEGKIVYVEDKAE 180
             SQYN  KPE +HN   ++ KRIR++GF   ++F  Y KFL+ ++P ++EGK+ YVED ++
Sbjct:   266 SQYNLKKPEVLHNTATIVHKRIRVQGFAAVEFFDRYSKFLDFILPHVREGKLTYVEDISQ 325

Query:   181 GLESAPAALVGLFSGRNVGKQVVEVA 206
             GLE+ P+AL+GLF G+NVGKQ+VEVA
Sbjct:   326 GLENGPSALIGLFHGKNVGKQLVEVA 351

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0006979 "response to oxidative stress" evidence=IEP

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q6WAU0	PULR_MENPI	1, ., 3, ., 1, ., 8, 1	0.7548	1.0	0.6081	N/A	no
Q39173	P2_ARATH	1, ., 3, ., 1, ., 7, 4	0.7644	1.0	0.6064	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	1.3.1	0.921
3rd Layer	1.3.1.74	LOW CONFIDENCE prediction!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	208
cd08295	338	cd08295, double_bond_reductase_like, Arabidopsis a	1e-138
PLN03154	348	PLN03154, PLN03154, putative allyl alcohol dehydro	1e-126
cd05288	329	cd05288, PGDH, Prostaglandin dehydrogenases	1e-110
COG2130	340	COG2130, COG2130, Putative NADP-dependent oxidored	1e-88
cd08294	329	cd08294, leukotriene_B4_DH_like, 13-PGR is a bifun	1e-81
TIGR02825	325	TIGR02825, B4_12hDH, leukotriene B4 12-hydroxydehy	3e-57
cd08293	345	cd08293, PTGR2, Prostaglandin reductase	3e-50
cd08250	329	cd08250, Mgc45594_like, Mgc45594 gene product and	6e-49
COG0604	326	COG0604, Qor, NADPH:quinone reductase and related	3e-24
cd05289	309	cd05289, MDR_like_2, alcohol dehydrogenase and qui	2e-22
cd08253	325	cd08253, zeta_crystallin, Zeta-crystallin with NAD	3e-20
cd05276	323	cd05276, p53_inducible_oxidoreductase, PIG3 p53-in	4e-20
cd05188	271	cd05188, MDR, Medium chain reductase/dehydrogenase	4e-18
cd08266	342	cd08266, Zn_ADH_like1, Alcohol dehydrogenases of t	5e-18
cd08241	323	cd08241, QOR1, Quinone oxidoreductase (QOR)	8e-17
pfam00107	131	pfam00107, ADH_zinc_N, Zinc-binding dehydrogenase	1e-16
cd08272	326	cd08272, MDR6, Medium chain dehydrogenases/reducta	4e-16
cd05286	320	cd05286, QOR2, Quinone oxidoreductase (QOR)	4e-16
cd08276	336	cd08276, MDR7, Medium chain dehydrogenases/reducta	8e-16
cd08267	319	cd08267, MDR1, Medium chain dehydrogenases/reducta	1e-15
cd08271	325	cd08271, MDR5, Medium chain dehydrogenases/reducta	1e-15
TIGR02824	325	TIGR02824, quinone_pig3, putative NAD(P)H quinone	9e-15
cd08275	337	cd08275, MDR3, Medium chain dehydrogenases/reducta	2e-14
PTZ00354	334	PTZ00354, PTZ00354, alcohol dehydrogenase; Provisi	8e-14
cd08251	303	cd08251, polyketide_synthase, polyketide synthase	2e-13
cd08268	328	cd08268, MDR2, Medium chain dehydrogenases/reducta	9e-13
cd08259	332	cd08259, Zn_ADH5, Alcohol dehydrogenases of the MD	6e-12
cd08244	324	cd08244, MDR_enoyl_red, Possible enoyl reductase	9e-11
cd05280	325	cd05280, MDR_yhdh_yhfp, Yhdh and yhfp-like putativ	2e-09
cd05195	293	cd05195, enoyl_red, enoyl reductase of polyketide	8e-09
smart00829	287	smart00829, PKS_ER, Enoylreductase	2e-08
cd05282	323	cd05282, ETR_like, 2-enoyl thioester reductase-lik	2e-08
cd08274	350	cd08274, MDR9, Medium chain dehydrogenases/reducta	4e-08
TIGR02823	323	TIGR02823, oxido_YhdH, putative quinone oxidoreduc	3e-07
cd08249	339	cd08249, enoyl_reductase_like, enoyl_reductase_lik	4e-07
COG1064	339	COG1064, AdhP, Zn-dependent alcohol dehydrogenases	5e-07
PRK13771	334	PRK13771, PRK13771, putative alcohol dehydrogenase	1e-06
cd08290	341	cd08290, ETR, 2-enoyl thioester reductase (ETR)	1e-06
COG1063	350	COG1063, Tdh, Threonine dehydrogenase and related	2e-06
cd08243	320	cd08243, quinone_oxidoreductase_like_1, Quinone ox	7e-06
cd08270	305	cd08270, MDR4, Medium chain dehydrogenases/reducta	8e-06
cd08297	341	cd08297, CAD3, Cinnamyl alcohol dehydrogenases (CA	3e-05
cd08273	331	cd08273, MDR8, Medium chain dehydrogenases/reducta	5e-05
PRK10754	327	PRK10754, PRK10754, quinone oxidoreductase, NADPH-	7e-05
cd08289	326	cd08289, MDR_yhfp_like, Yhfp putative quinone oxid	9e-05
cd08248	350	cd08248, RTN4I1, Human Reticulon 4 Interacting Pro	2e-04
cd08245	330	cd08245, CAD, Cinnamyl alcohol dehydrogenases (CAD	4e-04
cd08291	324	cd08291, ETR_like_1, 2-enoyl thioester reductase (	5e-04
cd08260	345	cd08260, Zn_ADH6, Alcohol dehydrogenases of the MD	8e-04
cd08255	277	cd08255, 2-desacetyl-2-hydroxyethyl_bacteriochloro	0.002
cd08264	325	cd08264, Zn_ADH_like2, Alcohol dehydrogenases of t	0.002
cd08254	338	cd08254, hydroxyacyl_CoA_DH, 6-hydroxycyclohex-1-e	0.002
cd08236	343	cd08236, sugar_DH, NAD(P)-dependent sugar dehydrog	0.004

>gnl|CDD|176255 cd08295, double_bond_reductase_like, Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase

 Score =  389 bits (1001), Expect = e-138
 Identities = 156/205 (76%), Positives = 176/205 (85%)

Query: 1   MPGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLK 60
           MPG+TAYAGF+EVC PK+GE VFVSAASGAVGQLVGQ AKL GCYVVGSAGS +KVDLLK
Sbjct: 134 MPGLTAYAGFYEVCKPKKGETVFVSAASGAVGQLVGQLAKLKGCYVVGSAGSDEKVDLLK 193

Query: 61  NKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVGGKMLDAVLLNMRIQGRITLCGMI 120
           NK GFD+AFNYKEEPDLDAALKRYFP GI+IYF+NVGGKMLDAVLLNM + GRI  CGMI
Sbjct: 194 NKLGFDDAFNYKEEPDLDAALKRYFPNGIDIYFDNVGGKMLDAVLLNMNLHGRIAACGMI 253

Query: 121 SQYNNDKPEGVHNLTCLISKRIRMEGFLVPDYFHLYPKFLEMMIPRIKEGKIVYVEDKAE 180
           SQYN + PEGV NL  +I KR++++GFLV DY H YP+FLE M   IKEGK+ YVED A+
Sbjct: 254 SQYNLEWPEGVRNLLNIIYKRVKIQGFLVGDYLHRYPEFLEEMSGYIKEGKLKYVEDIAD 313

Query: 181 GLESAPAALVGLFSGRNVGKQVVEV 205
           GLESAP A VGLF+G N+GKQVV+V
Sbjct: 314 GLESAPEAFVGLFTGSNIGKQVVKV 338

This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in inflamatory cells, and in other cells by bifunctional LTB4 12-HD/PGR. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. Length = 338

>gnl|CDD|215606 PLN03154, PLN03154, putative allyl alcohol dehydrogenase; Provisional

 Score =  358 bits (920), Expect = e-126
 Identities = 157/208 (75%), Positives = 177/208 (85%)

Query: 1   MPGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLK 60
           M G TAYAGF+EVCSPK+G+ VFVSAASGAVGQLVGQ AKL GCYVVGSAGS  KVDLLK
Sbjct: 141 MAGFTAYAGFYEVCSPKKGDSVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLK 200

Query: 61  NKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVGGKMLDAVLLNMRIQGRITLCGMI 120
           NK GFDEAFNYKEEPDLDAALKRYFPEGI+IYF+NVGG MLDA LLNM+I GRI +CGM+
Sbjct: 201 NKLGFDEAFNYKEEPDLDAALKRYFPEGIDIYFDNVGGDMLDAALLNMKIHGRIAVCGMV 260

Query: 121 SQYNNDKPEGVHNLTCLISKRIRMEGFLVPDYFHLYPKFLEMMIPRIKEGKIVYVEDKAE 180
           S  +    +G+HNL  LISKRIRM+GFL  DY HL+P+FLE +    K+GKIVY+ED +E
Sbjct: 261 SLNSLSASQGIHNLYNLISKRIRMQGFLQSDYLHLFPQFLENVSRYYKQGKIVYIEDMSE 320

Query: 181 GLESAPAALVGLFSGRNVGKQVVEVATE 208
           GLESAPAALVGLFSG+NVGKQV+ VA E
Sbjct: 321 GLESAPAALVGLFSGKNVGKQVIRVAKE 348

Length = 348

>gnl|CDD|176190 cd05288, PGDH, Prostaglandin dehydrogenases

 Score =  317 bits (814), Expect = e-110
 Identities = 109/203 (53%), Positives = 138/203 (67%), Gaps = 1/203 (0%)

Query: 1   MPGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLK 60
           M G+TAY G  E+  PK GE V VSAA+GAVG +VGQ AKL+G  VVG AGS +K   L 
Sbjct: 128 MTGLTAYFGLTEIGKPKPGETVVVSAAAGAVGSVVGQIAKLLGARVVGIAGSDEKCRWLV 187

Query: 61  NKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVGGKMLDAVLLNMRIQGRITLCGMI 120
            + GFD A NYK  PDL  ALK   P+GI++YF+NVGG++LDA L  +   GRI LCG I
Sbjct: 188 EELGFDAAINYKT-PDLAEALKEAAPDGIDVYFDNVGGEILDAALTLLNKGGRIALCGAI 246

Query: 121 SQYNNDKPEGVHNLTCLISKRIRMEGFLVPDYFHLYPKFLEMMIPRIKEGKIVYVEDKAE 180
           SQYN  +P G  NL  +I+KR+ M+GF+V DY   +P+ L  +   + EGK+ Y ED  E
Sbjct: 247 SQYNATEPPGPKNLGNIITKRLTMQGFIVSDYADRFPEALAELAKWLAEGKLKYREDVVE 306

Query: 181 GLESAPAALVGLFSGRNVGKQVV 203
           GLE+AP A +GLF+G+N GK VV
Sbjct: 307 GLENAPEAFLGLFTGKNTGKLVV 329

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. Length = 329

>gnl|CDD|225041 COG2130, COG2130, Putative NADP-dependent oxidoreductases [General function prediction only]

 Score =  263 bits (675), Expect = 1e-88
 Identities = 108/208 (51%), Positives = 140/208 (67%), Gaps = 3/208 (1%)

Query: 1   MPGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLK 60
           MPG+TAY G  ++  PK GE V VSAA+GAVG +VGQ AKL GC VVG AG  +K D L 
Sbjct: 133 MPGLTAYFGLLDIGQPKAGETVVVSAAAGAVGSVVGQIAKLKGCRVVGIAGGAEKCDFLT 192

Query: 61  NKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVGGKMLDAVLLNMRIQGRITLCGMI 120
            + GFD   +YK E D   ALK   P+GI++YFENVGG++LDAVL  + +  RI +CG I
Sbjct: 193 EELGFDAGIDYKAE-DFAQALKEACPKGIDVYFENVGGEVLDAVLPLLNLFARIPVCGAI 251

Query: 121 SQYNN-DKPEGVHNLTCLISKRIRMEGFLV-PDYFHLYPKFLEMMIPRIKEGKIVYVEDK 178
           SQYN  + P G   L  L++KR+R++GF+V  DY   +P+ L  +   +KEGKI Y E  
Sbjct: 252 SQYNAPELPPGPRRLPLLMAKRLRVQGFIVASDYDQRFPEALRELGGWVKEGKIQYRETI 311

Query: 179 AEGLESAPAALVGLFSGRNVGKQVVEVA 206
            +GLE+AP A +GL SG+N GK VV+VA
Sbjct: 312 VDGLENAPEAFIGLLSGKNFGKLVVKVA 339

Length = 340

>gnl|CDD|176254 cd08294, leukotriene_B4_DH_like, 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity

 Score =  245 bits (628), Expect = 1e-81
 Identities = 98/206 (47%), Positives = 134/206 (65%), Gaps = 3/206 (1%)

Query: 1   MPGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLK 60
           MPG+TAY G  E+C PK GE V V+ A+GAVG LVGQ AK+ GC V+G AGS DKV  LK
Sbjct: 126 MPGLTAYFGLLEICKPKAGETVVVNGAAGAVGSLVGQIAKIKGCKVIGCAGSDDKVAWLK 185

Query: 61  NKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVGGKMLDAVLLNMRIQGRITLCGMI 120
            + GFD  FNYK    L+ ALK   P+GI+ YF+NVGG+    VL +M   GR+ +CG I
Sbjct: 186 -ELGFDAVFNYKTV-SLEEALKEAAPDGIDCYFDNVGGEFSSTVLSHMNDFGRVAVCGSI 243

Query: 121 SQYNNDKPEGVHNL-TCLISKRIRMEGFLVPDYFHLYPKFLEMMIPRIKEGKIVYVEDKA 179
           S YN+ +P+    +   +I K+++MEGF+V  +   +P+ L+ ++  IKEGK+ Y E   
Sbjct: 244 STYNDKEPKKGPYVQETIIFKQLKMEGFIVYRWQDRWPEALKQLLKWIKEGKLKYREHVT 303

Query: 180 EGLESAPAALVGLFSGRNVGKQVVEV 205
           EG E+ P A +G+  G N GK +V+V
Sbjct: 304 EGFENMPQAFIGMLKGENTGKAIVKV 329

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. Length = 329

>gnl|CDD|131872 TIGR02825, B4_12hDH, leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase

 Score =  183 bits (465), Expect = 3e-57
 Identities = 99/212 (46%), Positives = 131/212 (61%), Gaps = 15/212 (7%)

Query: 1   MPGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLK 60
           MPG+TAY G  E+C  K GE V V+AA+GAVG +VGQ AKL GC VVG+AGS +KV  LK
Sbjct: 121 MPGLTAYFGLLEICGVKGGETVMVNAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKVAYLK 180

Query: 61  NKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVGGKMLDAVLLNMRIQGRITLCGMI 120
            K GFD AFNYK    L+  LK+  P+G + YF+NVGG+  + V+  M+  GRI +CG I
Sbjct: 181 -KLGFDVAFNYKTVKSLEETLKKASPDGYDCYFDNVGGEFSNTVIGQMKKFGRIAICGAI 239

Query: 121 SQYNND-------KPEGVHNLTCLISKRIRMEGFLVPDY-FHLYPKFLEMMIPRIKEGKI 172
           S YN          PE V      I + +RMEGF+V  +   +  K L+ ++  + EGKI
Sbjct: 240 STYNRTGPLPPGPPPEIV------IYQELRMEGFIVNRWQGEVRQKALKELLKWVLEGKI 293

Query: 173 VYVEDKAEGLESAPAALVGLFSGRNVGKQVVE 204
            Y E   EG E+ PAA +G+  G N+GK +V+
Sbjct: 294 QYKEYVIEGFENMPAAFMGMLKGENLGKTIVK 325

Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase. Length = 325

>gnl|CDD|176253 cd08293, PTGR2, Prostaglandin reductase

 Score =  166 bits (421), Expect = 3e-50
 Identities = 85/215 (39%), Positives = 123/215 (57%), Gaps = 14/215 (6%)

Query: 1   MPGMTAYAGFFE--VCSPKQGEYVFVSAASGAVGQLVGQFAKLVGC-YVVGSAGSKDKVD 57
           +PG+TA  G  E    +P   + + VS A+GA G L GQ  +L+GC  VVG  GS +K  
Sbjct: 135 LPGLTALIGIQEKGHITPGANQTMVVSGAAGACGSLAGQIGRLLGCSRVVGICGSDEKCQ 194

Query: 58  LLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVGGKMLDAVLLNMRIQGRITLC 117
           LLK++ GFD A NYK + ++   L+   PEG+++YF+NVGG++ D V+  M     I LC
Sbjct: 195 LLKSELGFDAAINYKTD-NVAERLRELCPEGVDVYFDNVGGEISDTVISQMNENSHIILC 253

Query: 118 GMISQYNNDKP------EGVHNLTCLISKR-IRMEGFLVPDYFHLYPKFLEMMIPRIKEG 170
           G ISQYN D P      E       ++ +R I  E FLV +Y   + + +  +   +KEG
Sbjct: 254 GQISQYNKDVPYPPPLPEAT---EAILKERNITRERFLVLNYKDKFEEAIAQLSQWVKEG 310

Query: 171 KIVYVEDKAEGLESAPAALVGLFSGRNVGKQVVEV 205
           K+   E   EGLE+A  A   + +G N+GKQ+V+V
Sbjct: 311 KLKVKETVYEGLENAGEAFQSMMNGGNIGKQIVKV 345

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. Length = 345

>gnl|CDD|176212 cd08250, Mgc45594_like, Mgc45594 gene product and other MDR family members

 Score =  162 bits (411), Expect = 6e-49
 Identities = 81/208 (38%), Positives = 120/208 (57%), Gaps = 8/208 (3%)

Query: 3   GMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNK 62
           G+TA     EV   K GE V V+AA+G  GQ   Q AKL GC+V+G+  S +K + LK+ 
Sbjct: 124 GLTASIALEEVGEMKSGETVLVTAAAGGTGQFAVQLAKLAGCHVIGTCSSDEKAEFLKS- 182

Query: 63  FGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVGGKMLDAVLLNMRIQGRITLCGMISQ 122
            G D   NYK E DL   LK+ +P+G+++ +E+VGG+M D  + N+ ++GR+ + G IS 
Sbjct: 183 LGCDRPINYKTE-DLGEVLKKEYPKGVDVVYESVGGEMFDTCVDNLALKGRLIVIGFISG 241

Query: 123 YNNDK---PEGVHNLTC-LISKRIRMEGFLVPDYFHLYPKFLEMMIPRIKEGKIVYVEDK 178
           Y +     P     L   L++K   + GF +P Y  L P+ L+ ++   + GK+V   D 
Sbjct: 242 YQSGTGPSPVKGATLPPKLLAKSASVRGFFLPHYAKLIPQHLDRLLQLYQRGKLVCEVDP 301

Query: 179 AE--GLESAPAALVGLFSGRNVGKQVVE 204
               GLES   A+  L+SG+N+GK VVE
Sbjct: 302 TRFRGLESVADAVDYLYSGKNIGKVVVE 329

Includes Human Mgc45594 gene product of undetermined function. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. Length = 329

>gnl|CDD|223677 COG0604, Qor, NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]

 Score = 97.0 bits (242), Expect = 3e-24
 Identities = 64/207 (30%), Positives = 96/207 (46%), Gaps = 7/207 (3%)

Query: 1   MPGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLK 60
           + G+TA+   F+    K GE V V  A+G VG    Q AK +G  VV    S +K++LLK
Sbjct: 125 LAGLTAWLALFDRAGLKPGETVLVHGAAGGVGSAAIQLAKALGATVVAVVSSSEKLELLK 184

Query: 61  NKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVGGKMLDAVLLNMRIQGRITLCGMI 120
            + G D   NY+EE  ++   +    +G+++  + VGG    A L  +   GR+   G +
Sbjct: 185 -ELGADHVINYREEDFVEQVRELTGGKGVDVVLDTVGGDTFAASLAALAPGGRLVSIGAL 243

Query: 121 SQYNNDKPEGVHNLTCLISKRIRMEG-FLVPDYFHLYPKFLEMMIPRIKEGKIVYVEDKA 179
           S      P    NL  L+ KR+ + G  L         + L  +   +  GK+  V D+ 
Sbjct: 244 S----GGPPVPLNLLPLLGKRLTLRGVTLGSRDPEALAEALAELFDLLASGKLKPVIDRV 299

Query: 180 EGLESAPAALVGLFS-GRNVGKQVVEV 205
             L  APAA   L    R  GK V++V
Sbjct: 300 YPLAEAPAAAAHLLLERRTTGKVVLKV 326

Length = 326

>gnl|CDD|176191 cd05289, MDR_like_2, alcohol dehydrogenase and quinone reductase-like medium chain degydrogenases/reductases

 Score = 91.9 bits (229), Expect = 2e-22
 Identities = 57/204 (27%), Positives = 85/204 (41%), Gaps = 22/204 (10%)

Query: 1   MPGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLK 60
           + G+TA+   FE+   K G+ V +  A+G VG    Q AK  G  V+ +A S    D L+
Sbjct: 127 LAGLTAWQALFELGGLKAGQTVLIHGAAGGVGSFAVQLAKARGARVIATA-SAANADFLR 185

Query: 61  NKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVGGKMLDAVLLNMRIQGRI-TLCGM 119
              G DE  +Y +     AA     P G++   + VGG+ L   L  ++  GR+ ++ G 
Sbjct: 186 -SLGADEVIDYTKGDFERAAA----PGGVDAVLDTVGGETLARSLALVKPGGRLVSIAGP 240

Query: 120 ISQYNNDKPEGVHNLTCLISKRIRMEGFLVPDYFHLYPKFLEMMIPRIKEGKIVYVEDKA 179
                  K  GV           R     V        + L  +   ++ GK+  V D+ 
Sbjct: 241 PPAEQAAKRRGV-----------RAGFVFVEP----DGEQLAELAELVEAGKLRPVVDRV 285

Query: 180 EGLESAPAALVGLFSGRNVGKQVV 203
             LE A  A   L SG   GK V+
Sbjct: 286 FPLEDAAEAHERLESGHARGKVVL 309

Members identified as zinc-dependent alcohol dehydrogenases and quinone oxidoreductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 309

>gnl|CDD|176215 cd08253, zeta_crystallin, Zeta-crystallin with NADP-dependent quinone reductase activity (QOR)

 Score = 86.1 bits (214), Expect = 3e-20
 Identities = 57/209 (27%), Positives = 89/209 (42%), Gaps = 14/209 (6%)

Query: 1   MPGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLK 60
           +P +TAY   F     K GE V V   SGAVG    Q A+  G  V+ +A S +  +L++
Sbjct: 127 IPALTAYRALFHRAGAKAGETVLVHGGSGAVGHAAVQLARWAGARVIATASSAEGAELVR 186

Query: 61  NKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVGGKMLDAVLLNMRIQGRITLCGMI 120
              G D  FNY+ E   D  L     +G+++  E +    L   L  +   GRI +    
Sbjct: 187 QA-GADAVFNYRAEDLADRILAATAGQGVDVIIEVLANVNLAKDLDVLAPGGRIVV---- 241

Query: 121 SQYNNDKPEGVHNLTCLISKRIRMEGFLVPDYFHLYPKFLEMMIPRI----KEGKIVYVE 176
             Y +    G   +  L++K   + G L+   +   P+        I     +G +  V 
Sbjct: 242 --YGSGGLRGTIPINPLMAKEASIRGVLL---YTATPEERAAAAEAIAAGLADGALRPVI 296

Query: 177 DKAEGLESAPAALVGLFSGRNVGKQVVEV 205
            +   LE A AA   + SG  +GK V++ 
Sbjct: 297 AREYPLEEAAAAHEAVESGGAIGKVVLDP 325

Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 325

>gnl|CDD|176180 cd05276, p53_inducible_oxidoreductase, PIG3 p53-inducible quinone oxidoreductase

 Score = 86.0 bits (214), Expect = 4e-20
 Identities = 59/209 (28%), Positives = 93/209 (44%), Gaps = 19/209 (9%)

Query: 4   MTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKF 63
            TA+   F++   K GE V +   +  VG    Q AK +G  V+ +AGS++K++  +   
Sbjct: 125 FTAWQNLFQLGGLKAGETVLIHGGASGVGTAAIQLAKALGARVIATAGSEEKLEACR-AL 183

Query: 64  GFDEAFNYKEEPDLDAALKRYF-PEGINIYFENVGGKMLDAVLLNMRIQGRITLCGMISQ 122
           G D A NY+ E D    +K      G+++  + VGG  L   L  +   GR+ L G++  
Sbjct: 184 GADVAINYRTE-DFAEEVKEATGGRGVDVILDMVGGDYLARNLRALAPDGRLVLIGLLG- 241

Query: 123 YNNDKPEGVH---NLTCLISKRIRMEGFLV---PDYF--HLYPKFLEMMIPRIKEGKIVY 174
                  G     +L  L+ KR+ + G  +          L   F E + P    G+I  
Sbjct: 242 -------GAKAELDLAPLLRKRLTLTGSTLRSRSLEEKAALAAAFREHVWPLFASGRIRP 294

Query: 175 VEDKAEGLESAPAALVGLFSGRNVGKQVV 203
           V DK   LE A  A   + S  ++GK V+
Sbjct: 295 VIDKVFPLEEAAEAHRRMESNEHIGKIVL 323

PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 323

>gnl|CDD|176178 cd05188, MDR, Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score = 79.7 bits (197), Expect = 4e-18
 Identities = 47/163 (28%), Positives = 70/163 (42%), Gaps = 10/163 (6%)

Query: 2   PGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKN 61
           P  TAY         K G+ V V  A G VG L  Q AK  G  V+ +  S +K++L K 
Sbjct: 118 PLATAYHALRRAGVLKPGDTVLVLGAGG-VGLLAAQLAKAAGARVIVTDRSDEKLELAK- 175

Query: 62  KFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVGGKM-LDAVLLNMRIQGRITLCGMI 120
           + G D   +YKEE DL+  L+     G ++  + VGG   L   L  +R  GRI + G  
Sbjct: 176 ELGADHVIDYKEE-DLEEELRLTGGGGADVVIDAVGGPETLAQALRLLRPGGRIVVVGGT 234

Query: 121 SQYNNDKPEGVHNLTCLISKRIRMEGFLVPDYFHLYPKFLEMM 163
           S               L+ K + + G         + + L+++
Sbjct: 235 SGGPPLDDLRR-----LLFKELTIIGSTGGTRED-FEEALDLL 271

The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Other MDR members have only a catalytic zinc, and some contain no coordinated zinc. Length = 271

>gnl|CDD|176227 cd08266, Zn_ADH_like1, Alcohol dehydrogenases of the MDR family

 Score = 80.4 bits (199), Expect = 5e-18
 Identities = 49/191 (25%), Positives = 80/191 (41%), Gaps = 15/191 (7%)

Query: 17  KQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPD 76
           + GE V V  A   VG    Q AKL G  V+ +AGS+DK++  K   G D   +Y++E  
Sbjct: 165 RPGETVLVHGAGSGVGSAAIQIAKLFGATVIATAGSEDKLERAKE-LGADYVIDYRKEDF 223

Query: 77  LDAALKRYFPEGINIYFENVGGKMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTC 136
           +    +     G+++  E+VG    +  L ++   GR+  CG  + Y     E   +L  
Sbjct: 224 VREVRELTGKRGVDVVVEHVGAATWEKSLKSLARGGRLVTCGATTGY-----EAPIDLRH 278

Query: 137 LISKRIRMEGFLV--PDYFHLYPKFLEMMIPRIKEGKIVYVEDKAEGLESAPAALVGLFS 194
           +  +++ + G  +          + +         GK+  V D    LE A  A   L S
Sbjct: 279 VFWRQLSILGSTMGTKAELDEALRLVF-------RGKLKPVIDSVFPLEEAAEAHRRLES 331

Query: 195 GRNVGKQVVEV 205
               GK V+  
Sbjct: 332 REQFGKIVLTP 342

This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 342

>gnl|CDD|176203 cd08241, QOR1, Quinone oxidoreductase (QOR)

 Score = 76.8 bits (190), Expect = 8e-17
 Identities = 56/204 (27%), Positives = 88/204 (43%), Gaps = 10/204 (4%)

Query: 5   TAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFG 64
           TAY         + GE V V  A+G VG    Q AK +G  V+ +A S++K+ L +   G
Sbjct: 126 TAYHALVRRARLQPGETVLVLGAAGGVGLAAVQLAKALGARVIAAASSEEKLALAR-ALG 184

Query: 65  FDEAFNYKEEPDLDAALKRYFPEGINIYFENVGGKMLDAVLLNMRIQGRITLCGMISQYN 124
            D   +Y++    +         G+++ ++ VGG + +A L ++   GR+ + G  S   
Sbjct: 185 ADHVIDYRDPDLRERVKALTGGRGVDVVYDPVGGDVFEASLRSLAWGGRLLVIGFAS--- 241

Query: 125 NDKPEGVHNLTCLISKRIRMEGFLVPDYFHLYPKFLEMMIPRI----KEGKIVYVEDKAE 180
            + P+   NL  L  K I + G     Y    P+ L   +  +     EGKI        
Sbjct: 242 GEIPQIPANLLLL--KNISVVGVYWGAYARREPELLRANLAELFDLLAEGKIRPHVSAVF 299

Query: 181 GLESAPAALVGLFSGRNVGKQVVE 204
            LE A  AL  L   +  GK V+ 
Sbjct: 300 PLEQAAEALRALADRKATGKVVLT 323

QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 323

>gnl|CDD|215721 pfam00107, ADH_zinc_N, Zinc-binding dehydrogenase

 Score = 72.3 bits (178), Expect = 1e-16
 Identities = 33/138 (23%), Positives = 60/138 (43%), Gaps = 11/138 (7%)

Query: 30  AVGQLVGQFAKLVG-CYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFP-E 87
            VG    Q AK +G   V+    S++K++L K + G D   NY++E D    ++      
Sbjct: 1   GVGLAAVQLAKALGAARVIAVDRSEEKLELAK-ELGADHVINYRDE-DFVERVRELTGGR 58

Query: 88  GINIYFENVG-GKMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCLISKRIRMEG 146
           G+++  + VG    L+  L  +R  GR+ + G+        P        L+ K + + G
Sbjct: 59  GVDVVIDCVGAPATLEQALELLRPGGRVVVVGLPGGAPVPFPLRD-----LLLKELTILG 113

Query: 147 FLVPDYFHLYPKFLEMMI 164
            L       + + LE++ 
Sbjct: 114 SLGGGREE-FEEALELLA 130

Length = 131

>gnl|CDD|176233 cd08272, MDR6, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score = 74.9 bits (185), Expect = 4e-16
 Identities = 49/210 (23%), Positives = 85/210 (40%), Gaps = 19/210 (9%)

Query: 3   GMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNK 62
           G+TA+ G  +  + + G+ V +   +G VG +  Q AK  G  V  +A S +K    +  
Sbjct: 129 GITAWEGLVDRAAVQAGQTVLIHGGAGGVGHVAVQLAKAAGARVYATASS-EKAAFAR-S 186

Query: 63  FGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVGGKMLDAVLLNMRIQGRITLCGMISQ 122
            G D    Y+E    +   +     G ++ F+ VGG+ LDA    + + GR+      + 
Sbjct: 187 LGADPIIYYRETVV-EYVAEHTGGRGFDVVFDTVGGETLDASFEAVALYGRVVSILGGAT 245

Query: 123 YNNDKPEGVHNLTCLISKRIRMEGFLVPDYFHL------YPKFLEMMIPRIKEGKI-VYV 175
                    H+L  L  +     G               + + L      ++ G++   +
Sbjct: 246 ---------HDLAPLSFRNATYSGVFTLLPLLTGEGRAHHGEILREAARLVERGQLRPLL 296

Query: 176 EDKAEGLESAPAALVGLFSGRNVGKQVVEV 205
           + +   LE A AA   L SG   GK V++V
Sbjct: 297 DPRTFPLEEAAAAHARLESGSARGKIVIDV 326

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 326

>gnl|CDD|176189 cd05286, QOR2, Quinone oxidoreductase (QOR)

 Score = 74.8 bits (185), Expect = 4e-16
 Identities = 37/122 (30%), Positives = 65/122 (53%), Gaps = 3/122 (2%)

Query: 1   MPGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLK 60
           + G+TA+    E    K G+ V V AA+G VG L+ Q+AK +G  V+G+  S++K +L +
Sbjct: 119 LQGLTAHYLLRETYPVKPGDTVLVHAAAGGVGLLLTQWAKALGATVIGTVSSEEKAELAR 178

Query: 61  NKFGFDEAFNYKEEPDLDAALKRY-FPEGINIYFENVGGKMLDAVLLNMRIQGRITLCGM 119
              G D   NY++E D    ++      G+++ ++ VG    +  L ++R +G +   G 
Sbjct: 179 AA-GADHVINYRDE-DFVERVREITGGRGVDVVYDGVGKDTFEGSLDSLRPRGTLVSFGN 236

Query: 120 IS 121
            S
Sbjct: 237 AS 238

Quinone oxidoreductase (QOR) and 2-haloacrylate reductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. 2-haloacrylate reductase, a member of this subgroup, catalyzes the NADPH-dependent reduction of a carbon-carbon double bond in organohalogen compounds. Although similar to QOR, Burkholderia 2-haloacrylate reductase does not act on the quinones 1,4-benzoquinone and 1,4-naphthoquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 320

>gnl|CDD|176237 cd08276, MDR7, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score = 74.1 bits (183), Expect = 8e-16
 Identities = 56/204 (27%), Positives = 83/204 (40%), Gaps = 13/204 (6%)

Query: 3   GMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNK 62
           G+TA+   F +   K G+ V V    G V     QFAK  G  V+ ++ S +K++  K  
Sbjct: 145 GLTAWNALFGLGPLKPGDTVLVQGTGG-VSLFALQFAKAAGARVIATSSSDEKLERAK-A 202

Query: 63  FGFDEAFNYKEEPDLDAALKRYFP-EGINIYFENVGGKMLDAVLLNMRIQGRITLCGMIS 121
            G D   NY+  PD    + +     G++   E  G   L   +  +   G I+L G +S
Sbjct: 203 LGADHVINYRTTPDWGEEVLKLTGGRGVDHVVEVGGPGTLAQSIKAVAPGGVISLIGFLS 262

Query: 122 QYNNDKPEGVHNLTCLISKRIRMEGFLVPDYFHLYPKFLEMMIPRIKEGKIVYVEDKAEG 181
                  E    L  L++K   + G  V           E M   I+  +I  V D+   
Sbjct: 263 -----GFEAPVLLLPLLTKGATLRGIAVGSRAQ-----FEAMNRAIEAHRIRPVIDRVFP 312

Query: 182 LESAPAALVGLFSGRNVGKQVVEV 205
            E A  A   L SG + GK V+ V
Sbjct: 313 FEEAKEAYRYLESGSHFGKVVIRV 336

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 336

>gnl|CDD|176228 cd08267, MDR1, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score = 73.4 bits (181), Expect = 1e-15
 Identities = 58/207 (28%), Positives = 91/207 (43%), Gaps = 19/207 (9%)

Query: 2   PGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKN 61
            G+TA     +    K G+ V ++ ASG VG    Q AK +G +V G   ++   +L+++
Sbjct: 127 AGLTALQALRDAGKVKPGQRVLINGASGGVGTFAVQIAKALGAHVTGVCSTR-NAELVRS 185

Query: 62  KFGFDEAFNYKEEP--DLDAALKRYFPEGINIYFENVGGKMLDAV--LLNMRIQGR-ITL 116
             G DE  +Y  E    L A  ++Y     ++ F+ VG          L ++  GR +++
Sbjct: 186 -LGADEVIDYTTEDFVALTAGGEKY-----DVIFDAVGNSPFSLYRASLALKPGGRYVSV 239

Query: 117 CGMISQYNNDKPEGVHNLTCLISKRIRMEGFLVPDYFHLYPKFLEMMIPRIKEGKIVYVE 176
            G  S         +  LT     R R++ FL         +  E++    +EGK+  V 
Sbjct: 240 GGGPSGLLL--VLLLLPLTLGGGGR-RLKFFLAKPNAEDLEQLAELV----EEGKLKPVI 292

Query: 177 DKAEGLESAPAALVGLFSGRNVGKQVV 203
           D    LE AP A   L SGR  GK V+
Sbjct: 293 DSVYPLEDAPEAYRRLKSGRARGKVVI 319

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 319

>gnl|CDD|176232 cd08271, MDR5, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score = 73.5 bits (181), Expect = 1e-15
 Identities = 51/226 (22%), Positives = 83/226 (36%), Gaps = 47/226 (20%)

Query: 2   PGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKN 61
            G+TAY   F+    + G  + ++  +G VG    Q AK  G  V+ +  SK   + +K 
Sbjct: 125 AGLTAYQALFKKLRIEAGRTILITGGAGGVGSFAVQLAKRAGLRVITTC-SKRNFEYVK- 182

Query: 62  KFGFDEAFNYKEEPDLDAALKRYF-PEGINIYFENVGG----KMLDAVLLNMR---IQGR 113
             G D   +Y +E D+   +K      G++   + VGG     +   +  N     IQGR
Sbjct: 183 SLGADHVIDYNDE-DVCERIKEITGGRGVDAVLDTVGGETAAALAPTLAFNGHLVCIQGR 241

Query: 114 ITLCGMISQYNNDKPEG----VHNLTCLIS----------KRIRMEGFLVPDYFHLYPKF 159
                     + D P      VH +  L +          + +R  G             
Sbjct: 242 PD-------ASPDPPFTRALSVHEV-ALGAAHDHGDPAAWQDLRYAG------------- 280

Query: 160 LEMMIPRIKEGKIVYVEDKAEGLESAPAALVGLFSGRNVGKQVVEV 205
            E ++  +  GK+  +  +    E  P AL  L      GK VV +
Sbjct: 281 -EELLELLAAGKLEPLVIEVLPFEQLPEALRALKDRHTRGKIVVTI 325

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 325

>gnl|CDD|234027 TIGR02824, quinone_pig3, putative NAD(P)H quinone oxidoreductase, PIG3 family

 Score = 71.1 bits (175), Expect = 9e-15
 Identities = 54/207 (26%), Positives = 91/207 (43%), Gaps = 11/207 (5%)

Query: 4   MTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKF 63
            T ++  F+    K GE V +   +  +G    Q AK  G  V  +AGS +K        
Sbjct: 125 FTVWSNLFQRGGLKAGETVLIHGGASGIGTTAIQLAKAFGARVFTTAGSDEKCA-ACEAL 183

Query: 64  GFDEAFNYKEEPDLDAALKRYFPEGINIYFENVGGKMLDAVLLNMRIQGRITLCGMISQY 123
           G D A NY+EE  ++        +G+++  + VGG  L+  +  + + GRI   G     
Sbjct: 184 GADIAINYREEDFVEVVKAETGGKGVDVILDIVGGSYLNRNIKALALDGRIVQIGFQ--- 240

Query: 124 NNDKPEGVHNLTCLISKRIRMEGFLV---PDYFH--LYPKFLEMMIPRIKEGKIVYVEDK 178
                +   +L  L++KR+ + G  +   P      +  +  E + P +  G++  V DK
Sbjct: 241 --GGRKAELDLGPLLAKRLTITGSTLRARPVAEKAAIAAELREHVWPLLASGRVRPVIDK 298

Query: 179 AEGLESAPAALVGLFSGRNVGKQVVEV 205
              LE A  A   + SG ++GK V+ V
Sbjct: 299 VFPLEDAAQAHALMESGDHIGKIVLTV 325

Members of this family are putative quinone oxidoreductases that belong to the broader superfamily (modeled by Pfam pfam00107) of zinc-dependent alcohol (of medium chain length) dehydrogenases and quinone oxiooreductases. The alignment shows no motif of conserved Cys residues as are found in zinc-binding members of the superfamily, and members are likely to be quinone oxidoreductases instead. A member of this family in Homo sapiens, PIG3, is induced by p53 but is otherwise uncharacterized [Unknown function, Enzymes of unknown specificity]. Length = 325

>gnl|CDD|176236 cd08275, MDR3, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score = 70.3 bits (173), Expect = 2e-14
 Identities = 60/218 (27%), Positives = 95/218 (43%), Gaps = 18/218 (8%)

Query: 3   GMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLV-GCYVVGSAGSKDKVDLLKN 61
            +TAY   FE+ + + G+ V V +A+G VG   GQ  K V    VVG+A S  K + LK 
Sbjct: 123 YLTAYYALFELGNLRPGQSVLVHSAAGGVGLAAGQLCKTVPNVTVVGTA-SASKHEALKE 181

Query: 62  KFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVGGKMLDAVLLNMRIQGRITLCGMIS 121
             G     +Y+ + D    +K+  PEG++I  + +GG+        ++  GR+ + G  +
Sbjct: 182 N-GVTHVIDYRTQ-DYVEEVKKISPEGVDIVLDALGGEDTRKSYDLLKPMGRLVVYGAAN 239

Query: 122 QYNNDKPEGVH-----------NLTCLISKRIRMEGFLVPDYFHLYPKFLEMMIPRIK-- 168
               +K                +   LIS+   + GF +   F       E+M   +K  
Sbjct: 240 LVTGEKRSWFKLAKKWWNRPKVDPMKLISENKSVLGFNLGWLFEERELLTEVMDKLLKLY 299

Query: 169 -EGKIVYVEDKAEGLESAPAALVGLFSGRNVGKQVVEV 205
            EGKI    D     E    A+  L S +N+GK V+  
Sbjct: 300 EEGKIKPKIDSVFPFEEVGEAMRRLQSRKNIGKVVLTP 337

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 337

>gnl|CDD|173547 PTZ00354, PTZ00354, alcohol dehydrogenase; Provisional

 Score = 68.5 bits (168), Expect = 8e-14
 Identities = 50/208 (24%), Positives = 89/208 (42%), Gaps = 11/208 (5%)

Query: 4   MTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKF 63
           +TA+    +    K+G+ V + A +  VG    Q A+  G   + +  S++KVD  K   
Sbjct: 126 LTAWQLLKKHGDVKKGQSVLIHAGASGVGTAAAQLAEKYGAATIITTSSEEKVDFCKK-L 184

Query: 64  GFDEAFNYKEEPDLDAALKRYF-PEGINIYFENVGGKMLDAVLLNMRIQGRITLCGMISQ 122
                  Y +E      +K+    +G+N+  + VGG  L      + + G+  + G +  
Sbjct: 185 AAIILIRYPDEEGFAPKVKKLTGEKGVNLVLDCVGGSYLSETAEVLAVDGKWIVYGFMGG 244

Query: 123 YNNDKPEGVHNLTCLISKRIRMEGFLV---PDYF--HLYPKFLEMMIPRIKEGKIVYVED 177
              +K     NL  L+ KR  +    +    D +   L   F   ++P ++EG+I  + D
Sbjct: 245 AKVEKF----NLLPLLRKRASIIFSTLRSRSDEYKADLVASFEREVLPYMEEGEIKPIVD 300

Query: 178 KAEGLESAPAALVGLFSGRNVGKQVVEV 205
           +   LE    A   L   +N+GK V+ V
Sbjct: 301 RTYPLEEVAEAHTFLEQNKNIGKVVLTV 328

Length = 334

>gnl|CDD|176213 cd08251, polyketide_synthase, polyketide synthase

 Score = 67.5 bits (165), Expect = 2e-13
 Identities = 52/217 (23%), Positives = 85/217 (39%), Gaps = 35/217 (16%)

Query: 3   GMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNK 62
            +T    F       +GE++ +  A+G  G +  Q A+L G  +  +A S DK++ LK +
Sbjct: 106 FLTVIDAF-ARAGLAKGEHILIQTATGGTGLMAVQLARLKGAEIYATASSDDKLEYLK-Q 163

Query: 63  FGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVGGKMLDAVLLNM----RIQ------- 111
            G     NY EE D +  + R             GG+ +D V +N      IQ       
Sbjct: 164 LGVPHVINYVEE-DFEEEIMRL-----------TGGRGVDVV-INTLSGEAIQKGLNCLA 210

Query: 112 --GR---ITLCGMISQYNNDKPEGVHNLTCLISKRIRMEGFLVPDYFHLYPKFLEMMIPR 166
             GR   I +  + S  + D    + N     S  +R    L P++   Y      M+  
Sbjct: 211 PGGRYVEIAMTALKSAPSVDL-SVLSNNQSFHSVDLRKLLLLDPEFIADY---QAEMVSL 266

Query: 167 IKEGKIVYVEDKAEGLESAPAALVGLFSGRNVGKQVV 203
           ++EG++     +    +    A   L    N+GK VV
Sbjct: 267 VEEGELRPTVSRIFPFDDIGEAYRYLSDRENIGKVVV 303

Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Length = 303

>gnl|CDD|176229 cd08268, MDR2, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score = 65.3 bits (160), Expect = 9e-13
 Identities = 52/210 (24%), Positives = 86/210 (40%), Gaps = 13/210 (6%)

Query: 1   MPGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLK 60
           M  +TAY    E+   + G+ V ++AAS +VG    Q A   G  V+ +  + +K D L 
Sbjct: 127 MQYLTAYGALVELAGLRPGDSVLITAASSSVGLAAIQIANAAGATVIATTRTSEKRDALL 186

Query: 61  NKFGFDEAFNYKEEPDLDAALKRY-FPEGINIYFENVGGKMLDAVLLNMRIQGRITLCGM 119
              G        EE DL A + R    +G+++ F+ VGG     +   +   G + + G 
Sbjct: 187 AL-GAAHVIVTDEE-DLVAEVLRITGGKGVDVVFDPVGGPQFAKLADALAPGGTLVVYGA 244

Query: 120 ISQYNNDKPEGVHNLTCLISKRIRMEGFLVPDYFHLYPKFLEMMIPRIKE----GKIVYV 175
           +S      P         + K +   G+ + +   L P+     I  I +    G +  V
Sbjct: 245 LSGEPTPFPLKAA-----LKKSLTFRGYSLDE-ITLDPEARRRAIAFILDGLASGALKPV 298

Query: 176 EDKAEGLESAPAALVGLFSGRNVGKQVVEV 205
            D+    +    A   L SG+ +GK VV  
Sbjct: 299 VDRVFPFDDIVEAHRYLESGQQIGKIVVTP 328

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 328

>gnl|CDD|176220 cd08259, Zn_ADH5, Alcohol dehydrogenases of the MDR family

 Score = 63.1 bits (154), Expect = 6e-12
 Identities = 54/190 (28%), Positives = 80/190 (42%), Gaps = 18/190 (9%)

Query: 15  SPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEE 74
             K+G+ V V+ A G VG    Q AK +G  V+    S +K+ +LK           K  
Sbjct: 159 GVKKGDTVLVTGAGGGVGIHAIQLAKALGARVIAVTRSPEKLKILKELGADYVIDGSKFS 218

Query: 75  PDLDAALKRYFPEGINIYFENVGGKMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVH-N 133
            D+          G ++  E VG   ++  L ++   GR+ L G      N  P+     
Sbjct: 219 EDVKKLG------GADVVIELVGSPTIEESLRSLNKGGRLVLIG------NVTPDPAPLR 266

Query: 134 LTCLISKRIRMEGFLVPDYFHLYPKFLEMMIPRIKEGKIVYVEDKAEGLESAPAALVGLF 193
              LI K IR+ G +           +E  +  +KEGKI  V D+   LE    AL  L 
Sbjct: 267 PGLLILKEIRIIGSISAT-----KADVEEALKLVKEGKIKPVIDRVVSLEDINEALEDLK 321

Query: 194 SGRNVGKQVV 203
           SG+ VG+ V+
Sbjct: 322 SGKVVGRIVL 331

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine (His-51), the ribose of NAD, a serine (Ser-48), then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 332

>gnl|CDD|176206 cd08244, MDR_enoyl_red, Possible enoyl reductase

 Score = 59.7 bits (145), Expect = 9e-11
 Identities = 38/121 (31%), Positives = 56/121 (46%), Gaps = 2/121 (1%)

Query: 1   MPGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLK 60
             G TA  G  ++ +   G+ V V+AA+G +G L+ Q AK  G  VVG+AG   K  L++
Sbjct: 126 HDGRTA-LGLLDLATLTPGDVVLVTAAAGGLGSLLVQLAKAAGATVVGAAGGPAKTALVR 184

Query: 61  NKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVGGKMLDAVLLNMRIQGRITLCGMI 120
              G D A +Y      D   +     G+ +  + VGG +  A L  +   GR    G  
Sbjct: 185 -ALGADVAVDYTRPDWPDQVREALGGGGVTVVLDGVGGAIGRAALALLAPGGRFLTYGWA 243

Query: 121 S 121
           S
Sbjct: 244 S 244

Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Candida tropicalis enoyl thioester reductase (Etr1p) catalyzes the NADPH-dependent reduction of trans-2-enoyl thioesters in mitochondrial fatty acid synthesis. Etr1p forms homodimers, with each subunit containing a nucleotide-binding Rossmann fold domain and a catalytic domain. Length = 324

>gnl|CDD|176183 cd05280, MDR_yhdh_yhfp, Yhdh and yhfp-like putative quinone oxidoreductases

 Score = 56.0 bits (136), Expect = 2e-09
 Identities = 51/207 (24%), Positives = 84/207 (40%), Gaps = 37/207 (17%)

Query: 13  VCSPKQGEYVFVSAASGAVGQL-VGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNY 71
             +P+ G  V V+ A+G VG + V   AKL G  VV   G +++ D LK   G  E  + 
Sbjct: 142 GQTPEDGP-VLVTGATGGVGSIAVAILAKL-GYTVVALTGKEEQADYLK-SLGASEVLDR 198

Query: 72  KE-EPDLDAAL-KRYFPEGINIYFENVGGKMLDAVLLNMRIQGRITLCGMISQYNNDK-- 127
           ++   +    L K  +   I    + VGG +L  +L   +  G +  CG  +        
Sbjct: 199 EDLLDESKKPLLKARWAGAI----DTVGGDVLANLLKQTKYGGVVASCGNAAGPELTTTV 254

Query: 128 -P---EGVHNL-----TCLISKRIRMEGFLVPDYFHLYPKFLEMMIPRIKEGKIVYVEDK 178
            P    GV  L      C +  R ++   L  +     P  LE++              +
Sbjct: 255 LPFILRGVSLLGIDSVNCPMELRKQVWQKLATE---WKPDLLEIV-------------VR 298

Query: 179 AEGLESAPAALVGLFSGRNVGKQVVEV 205
              LE  P A+  L +G++ G+ VV++
Sbjct: 299 EISLEELPEAIDRLLAGKHRGRTVVKI 325

Yhdh and yhfp-like putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 325

>gnl|CDD|176179 cd05195, enoyl_red, enoyl reductase of polyketide synthase

 Score = 53.7 bits (130), Expect = 8e-09
 Identities = 21/64 (32%), Positives = 36/64 (56%)

Query: 4   MTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKF 63
           +TAY    ++   ++GE V + AA+G VGQ   Q A+ +G  V  + GS++K + L+   
Sbjct: 94  LTAYYALVDLARLQKGESVLIHAAAGGVGQAAIQLAQHLGAEVFATVGSEEKREFLRELG 153

Query: 64  GFDE 67
           G  +
Sbjct: 154 GPVD 157

Putative enoyl reductase of polyketide synthase. Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains, at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Length = 293

>gnl|CDD|214840 smart00829, PKS_ER, Enoylreductase

 Score = 52.4 bits (127), Expect = 2e-08
 Identities = 23/64 (35%), Positives = 34/64 (53%), Gaps = 1/64 (1%)

Query: 5   TAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFG 64
           TAY    ++   + GE V + AA+G VGQ   Q A+ +G  V  +AGS +K D L+   G
Sbjct: 90  TAYYALVDLARLRPGESVLIHAAAGGVGQAAIQLARHLGAEVFATAGSPEKRDFLRA-LG 148

Query: 65  FDEA 68
             + 
Sbjct: 149 IPDD 152

Enoylreductase in Polyketide synthases. Length = 287

>gnl|CDD|176645 cd05282, ETR_like, 2-enoyl thioester reductase-like

 Score = 52.7 bits (127), Expect = 2e-08
 Identities = 46/203 (22%), Positives = 81/203 (39%), Gaps = 13/203 (6%)

Query: 4   MTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKF 63
           +TA+    E      G++V  +AA+ AVG+++ Q AKL+G   +      ++V+ LK   
Sbjct: 124 LTAWLMLTEYLKLPPGDWVIQNAANSAVGRMLIQLAKLLGFKTINVVRRDEQVEELKAL- 182

Query: 64  GFDEAFNYKEEPDLDAALK-RYFPEGINIYFENVGGKMLDAVLLNMRIQGRITLCGMISQ 122
           G DE  +     DL   +K      G  +  + VGG+    +  ++R  G +   G++S 
Sbjct: 183 GADEVIDS-SPEDLAQRVKEATGGAGARLALDAVGGESATRLARSLRPGGTLVNYGLLS- 240

Query: 123 YNNDKPEGVHNLTCLISKRIRMEGFLVPDYFH-----LYPKFLEMMIPRIKEGKIVYVED 177
                P      +  I K I + GF +  + H        +    +I  ++ G +     
Sbjct: 241 -GEPVP---FPRSVFIFKDITVRGFWLRQWLHSATKEAKQETFAEVIKLVEAGVLTTPVG 296

Query: 178 KAEGLESAPAALVGLFSGRNVGK 200
               LE    A+         GK
Sbjct: 297 AKFPLEDFEEAVAAAEQPGRGGK 319

2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Candida tropicalis enoyl thioester reductase (Etr1p) catalyzes the NADPH-dependent reduction of trans-2-enoyl thioesters in mitochondrial fatty acid synthesis. Etr1p forms homodimers with each subunit containing a nucleotide-binding Rossmann fold domain and a catalytic domain. Length = 323

>gnl|CDD|176235 cd08274, MDR9, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score = 51.9 bits (125), Expect = 4e-08
 Identities = 52/189 (27%), Positives = 78/189 (41%), Gaps = 18/189 (9%)

Query: 17  KQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPD 76
             GE V V+ ASG VG  + Q AK  G  V+  AG   K + ++   G D     ++ P 
Sbjct: 176 GAGETVLVTGASGGVGSALVQLAKRRGAIVIAVAG-AAKEEAVR-ALGAD-TVILRDAPL 232

Query: 77  LDAALKRYFPEGINIYFENVGGKMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTC 136
           L  A K    E +++  + VGG +   +L  +R  GR    G I+      P    +L  
Sbjct: 233 LADA-KALGGEPVDVVADVVGGPLFPDLLRLLRPGGRYVTAGAIA-----GPVVELDLRT 286

Query: 137 LISKRIRMEG--FLVPDYFHLYPKFLEMMIPRIKEGKIVYVEDKAEGLESAPAALVGLFS 194
           L  K + + G      + F         ++  I+EG+I  V  K   L     A      
Sbjct: 287 LYLKDLTLFGSTLGTREVF-------RRLVRYIEEGEIRPVVAKTFPLSEIREAQAEFLE 339

Query: 195 GRNVGKQVV 203
            R+VGK V+
Sbjct: 340 KRHVGKLVL 348

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 350

>gnl|CDD|234026 TIGR02823, oxido_YhdH, putative quinone oxidoreductase, YhdH/YhfP family

 Score = 49.5 bits (119), Expect = 3e-07
 Identities = 55/207 (26%), Positives = 86/207 (41%), Gaps = 40/207 (19%)

Query: 14  CSPKQGEYVFVSAASGAVGQL-VGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYK 72
            +P+ G  V V+ A+G VG L V   +KL G  VV S G  ++ D LK + G  E  + +
Sbjct: 142 LTPEDGP-VLVTGATGGVGSLAVAILSKL-GYEVVASTGKAEEEDYLK-ELGASEVIDRE 198

Query: 73  E-EPDLDAALKRYFPEGINIYFENVGGKMLDAVLLNMRIQGRITLCGMISQYNNDKPE-- 129
           +  P      K  +   +    + VGG  L  VL  ++  G +  CG+      D P   
Sbjct: 199 DLSPPGKPLEKERWAGAV----DTVGGHTLANVLAQLKYGGAVAACGLAG--GPDLPTTV 252

Query: 130 -----------GVHNLTCLISKRIRMEGFLVPDYFHLYPKFLEMMIPRIKEGKIVYVEDK 178
                      G+ ++ C ++ R      L  D   L P+ LE +   I           
Sbjct: 253 LPFILRGVSLLGIDSVYCPMALREAAWQRLATD---LKPRNLESITREI----------- 298

Query: 179 AEGLESAPAALVGLFSGRNVGKQVVEV 205
              LE  P AL  + +G++ G+ VV+V
Sbjct: 299 --TLEELPEALEQILAGQHRGRTVVDV 323

This model represents a subfamily of pfam00107 as defined by Pfam, a superfamily in which some members are zinc-binding medium-chain alcohol dehydrogenases while others are quinone oxidoreductases with no bound zinc. This subfamily includes proteins studied crystallographically for insight into function: YhdH from Escherichia coli and YhfP from Bacillus subtilis. Members bind NADPH or NAD, but not zinc [Unknown function, Enzymes of unknown specificity]. Length = 323

>gnl|CDD|176211 cd08249, enoyl_reductase_like, enoyl_reductase_like

 Score = 49.1 bits (118), Expect = 4e-07
 Identities = 26/91 (28%), Positives = 41/91 (45%), Gaps = 13/91 (14%)

Query: 4   MTAYAGFF----------EVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSK 53
           +TA    F          +     +G+ V +   S +VG L  Q AKL G  V+ +A  K
Sbjct: 130 VTAALALFQKLGLPLPPPKPSPASKGKPVLIWGGSSSVGTLAIQLAKLAGYKVITTASPK 189

Query: 54  DKVDLLKNKFGFDEAFNYKEEPDLDAALKRY 84
           +  DL+K   G D  F+Y  +PD+   ++  
Sbjct: 190 NF-DLVK-SLGADAVFDYH-DPDVVEDIRAA 217

Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Candida tropicalis enoyl thioester reductase (Etr1p) catalyzes the NADPH-dependent reduction of trans-2-enoyl thioesters in mitochondrial fatty acid synthesis. Etr1p forms homodimers with each subunit containing a nucleotide-binding Rossmann fold domain and a catalytic domain. Length = 339

>gnl|CDD|223992 COG1064, AdhP, Zn-dependent alcohol dehydrogenases [General function prediction only]

 Score = 48.7 bits (117), Expect = 5e-07
 Identities = 50/191 (26%), Positives = 82/191 (42%), Gaps = 16/191 (8%)

Query: 17  KQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPD 76
           K G++V V  A G +G +  Q+AK +G  V+    S++K++L K K G D   N  +   
Sbjct: 165 KPGKWVAVVGA-GGLGHMAVQYAKAMGAEVIAITRSEEKLELAK-KLGADHVINSSDSDA 222

Query: 77  LDAALKRYFPEGINIYFENVGGKMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTC 136
           L+A       E  +   + VG   L+  L  +R  G + L G+        P  +     
Sbjct: 223 LEAV-----KEIADAIIDTVGPATLEPSLKALRRGGTLVLVGLPGG----GPIPLLPAFL 273

Query: 137 LISKRIRMEGFLVPDYFHLYPKFLEMMIPRIKEGKIVYVEDKAEGLESAPAALVGLFSGR 196
           LI K I + G LV          LE  +    EGKI     +   L+    A   +  G+
Sbjct: 274 LILKEISIVGSLV-----GTRADLEEALDFAAEGKIKPEILETIPLDEINEAYERMEKGK 328

Query: 197 NVGKQVVEVAT 207
             G+ V+++++
Sbjct: 329 VRGRAVIDMSS 339

Length = 339

>gnl|CDD|184316 PRK13771, PRK13771, putative alcohol dehydrogenase; Provisional

 Score = 47.7 bits (114), Expect = 1e-06
 Identities = 51/193 (26%), Positives = 79/193 (40%), Gaps = 28/193 (14%)

Query: 17  KQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFD----EAFNYK 72
           K+GE V V+ A G VG    Q AK +G  V+    S+ K  ++  K+         F+  
Sbjct: 161 KKGETVLVTGAGGGVGIHAIQVAKALGAKVIAVTSSESKAKIVS-KYADYVIVGSKFS-- 217

Query: 73  EEPDLDAALKRYFPEGINIYFENVGGKMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVH 132
           EE      +K+    G +I  E VG   L+  L ++ + G+I   G      N  P   +
Sbjct: 218 EE------VKKI--GGADIVIETVGTPTLEESLRSLNMGGKIIQIG------NVDPSPTY 263

Query: 133 NLTC--LISKRIRMEGFLVPDYFHLYPKFLEMMIPRIKEGKIVYVEDKAEGLESAPAALV 190
           +L    +I K I + G +         + +E  +  + EGKI  V      L     AL 
Sbjct: 264 SLRLGYIILKDIEIIGHISAT-----KRDVEEALKLVAEGKIKPVIGAEVSLSEIDKALE 318

Query: 191 GLFSGRNVGKQVV 203
            L     +GK +V
Sbjct: 319 ELKDKSRIGKILV 331

Length = 334

>gnl|CDD|176250 cd08290, ETR, 2-enoyl thioester reductase (ETR)

 Score = 47.6 bits (114), Expect = 1e-06
 Identities = 51/211 (24%), Positives = 82/211 (38%), Gaps = 40/211 (18%)

Query: 17  KQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKN---KFGFDEAFNYKE 73
           + G++V  + A+ AVGQ V Q AKL+G   +     +  ++ LK      G D     +E
Sbjct: 145 QPGDWVIQNGANSAVGQAVIQLAKLLGIKTINVVRDRPDLEELKERLKALGADHVLTEEE 204

Query: 74  EPDLDAA--LKRYFPEGINIYFENVGGKMLDAVLLNMRIQGR----ITLCGMISQYNNDK 127
              L A   LK        +    VGGK   +     R+       +T  GM     + +
Sbjct: 205 LRSLLATELLKSAPGGRPKLALNCVGGK---SATELARLLSPGGTMVTYGGM-----SGQ 256

Query: 128 PEGVHNLTCLISKRIRMEGFLVPDYF---------HLYPKFLEMMIPRIKEGKIVYV--- 175
           P  V   + LI K I + GF +  +           +  +  E++    +EGK+      
Sbjct: 257 PVTV-PTSLLIFKDITLRGFWLTRWLKRANPEEKEDMLEELAELI----REGKLKAPPVE 311

Query: 176 ---EDKAEGLESAPAALVGLFSGRNVGKQVV 203
              +D  E  + A A  +    G   GKQV+
Sbjct: 312 KVTDDPLEEFKDALANALKGGGG---GKQVL 339

2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains, at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Candida tropicalis enoyl thioester reductase (Etr1p) catalyzes the NADPH-dependent reduction of trans-2-enoyl thioesters in mitochondrial fatty acid synthesis. Etr1p forms homodimers, with each subunit containing a nucleotide-binding Rossmann fold domain and a catalytic domain. Length = 341

>gnl|CDD|223991 COG1063, Tdh, Threonine dehydrogenase and related Zn-dependent dehydrogenases [Amino acid transport and metabolism / General function prediction only]

 Score = 47.4 bits (113), Expect = 2e-06
 Identities = 48/188 (25%), Positives = 80/188 (42%), Gaps = 12/188 (6%)

Query: 5   TAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCY-VVGSAGSKDKVDLLKNKF 63
           TAY G  E  + + G  V V  A G +G L    AKL+G   V+    S ++++L K   
Sbjct: 155 TAYHGHAERAAVRPGGTVVVVGA-GPIGLLAIALAKLLGASVVIVVDRSPERLELAKEAG 213

Query: 64  GFDEAFNYKEEPDLDAALKRYFPEGINIYFENVG-GKMLDAVLLNMRIQGRITLCGMISQ 122
           G D   N  E+      L+     G ++  E VG    LD  L  +R  G + + G+   
Sbjct: 214 GADVVVNPSEDDAGAEILELTGGRGADVVIEAVGSPPALDQALEALRPGGTVVVVGVYGG 273

Query: 123 YNNDKPEGVHNLTCLISKRIRMEGFLVPDYFHLYPKFLEMM-IPRIKEGKIVYVEDKAEG 181
            +   P G+     ++SK + + G L P     + + L+++   +I   K++        
Sbjct: 274 EDIPLPAGL-----VVSKELTLRGSLRPSGREDFERALDLLASGKIDPEKLI---THRLP 325

Query: 182 LESAPAAL 189
           L+ A  A 
Sbjct: 326 LDDAAEAY 333

Length = 350

>gnl|CDD|176205 cd08243, quinone_oxidoreductase_like_1, Quinone oxidoreductase (QOR)

 Score = 45.3 bits (108), Expect = 7e-06
 Identities = 29/123 (23%), Positives = 54/123 (43%), Gaps = 6/123 (4%)

Query: 1   MPGM--TAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDL 58
           +P    TA+   F     + G+ + +   + +VG    + AK +G  V  +  S ++  L
Sbjct: 123 LPETYYTAWGSLFRSLGLQPGDTLLIRGGTSSVGLAALKLAKALGATVTATTRSPERAAL 182

Query: 59  LKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVGGKMLDAVLLNMRIQGRITLCG 118
           LK + G DE     ++  +   L+   P G +   E VG   L   L ++R  G + + G
Sbjct: 183 LK-ELGADEVV--IDDGAIAEQLRAA-PGGFDKVLELVGTATLKDSLRHLRPGGIVCMTG 238

Query: 119 MIS 121
           ++ 
Sbjct: 239 LLG 241

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 320

>gnl|CDD|176231 cd08270, MDR4, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score = 45.1 bits (107), Expect = 8e-06
 Identities = 29/120 (24%), Positives = 45/120 (37%), Gaps = 11/120 (9%)

Query: 2   PGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKN 61
            G+TA         P  G  V V+ ASG VG+   Q A L G +VV   GS  + + L+ 
Sbjct: 117 AGVTALRALRRG-GPLLGRRVLVTGASGGVGRFAVQLAALAGAHVVAVVGSPARAEGLRE 175

Query: 62  KFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVGGKMLDAVLLNMRIQGRITLCGMIS 121
               +            +         +++  ++VGG  L   L  +   G +   G  S
Sbjct: 176 LGAAEVV----VGGSELS------GAPVDLVVDSVGGPQLARALELLAPGGTVVSVGSSS 225

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 305

>gnl|CDD|176257 cd08297, CAD3, Cinnamyl alcohol dehydrogenases (CAD)

 Score = 43.3 bits (103), Expect = 3e-05
 Identities = 24/80 (30%), Positives = 43/80 (53%), Gaps = 2/80 (2%)

Query: 3   GMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNK 62
           G+T Y    +    K G++V +S A G +G L  Q+AK +G  V+      +K++L K +
Sbjct: 151 GVTVYKAL-KKAGLKPGDWVVISGAGGGLGHLGVQYAKAMGLRVIAIDVGDEKLELAK-E 208

Query: 63  FGFDEAFNYKEEPDLDAALK 82
            G D   ++K+  D++A  +
Sbjct: 209 LGADAFVDFKKSDDVEAVKE 228

These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 341

>gnl|CDD|176234 cd08273, MDR8, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score = 42.6 bits (101), Expect = 5e-05
 Identities = 17/51 (33%), Positives = 24/51 (47%)

Query: 3   GMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSK 53
            +TAY           G+ V +  ASG VGQ + + A L G  V G+A  +
Sbjct: 124 YVTAYQMLHRAAKVLTGQRVLIHGASGGVGQALLELALLAGAEVYGTASER 174

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 331

>gnl|CDD|182701 PRK10754, PRK10754, quinone oxidoreductase, NADPH-dependent; Provisional

 Score = 42.4 bits (100), Expect = 7e-05
 Identities = 24/72 (33%), Positives = 35/72 (48%), Gaps = 1/72 (1%)

Query: 3   GMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNK 62
           G+T Y    +    K  E     AA+G VG +  Q+AK +G  ++G+ GS  K    K  
Sbjct: 125 GLTVYYLLRKTYEIKPDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGSAQKAQRAKKA 184

Query: 63  FGFDEAFNYKEE 74
            G  +  NY+EE
Sbjct: 185 -GAWQVINYREE 195

Length = 327

>gnl|CDD|176249 cd08289, MDR_yhfp_like, Yhfp putative quinone oxidoreductases

 Score = 41.9 bits (99), Expect = 9e-05
 Identities = 32/107 (29%), Positives = 50/107 (46%), Gaps = 8/107 (7%)

Query: 15  SPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEE 74
           +P+QG  V V+ A+G VG L       +G  VV S G  D  D LK K G  E    +E 
Sbjct: 144 TPEQGP-VLVTGATGGVGSLAVSILAKLGYEVVASTGKADAADYLK-KLGAKEVIPREEL 201

Query: 75  PD--LDAALKRYFPEGINIYFENVGGKMLDAVLLNMRIQGRITLCGM 119
            +  +    K+ +   +    + VGGK L  +L  ++  G + + G+
Sbjct: 202 QEESIKPLEKQRWAGAV----DPVGGKTLAYLLSTLQYGGSVAVSGL 244

yhfp putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 326

>gnl|CDD|176210 cd08248, RTN4I1, Human Reticulon 4 Interacting Protein 1

 Score = 40.7 bits (96), Expect = 2e-04
 Identities = 22/78 (28%), Positives = 33/78 (42%), Gaps = 6/78 (7%)

Query: 3   GMTAYAGFFEVC----SPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDL 58
           G+TA++    V         G+ V +   SG VG    Q  K  G +V  +  S D + L
Sbjct: 143 GLTAWSALVNVGGLNPKNAAGKRVLILGGSGGVGTFAIQLLKAWGAHVTTTC-STDAIPL 201

Query: 59  LKNKFGFDEAFNYKEEPD 76
           +K   G D+  +Y  E  
Sbjct: 202 VK-SLGADDVIDYNNEDF 218

Human Reticulon 4 Interacting Protein 1 is a member of the medium chain dehydrogenase/ reductase (MDR) family. Riticulons are endoplasmic reticulum associated proteins involved in membrane trafficking and neuroendocrine secretion. The MDR/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. Length = 350

>gnl|CDD|176207 cd08245, CAD, Cinnamyl alcohol dehydrogenases (CAD) and related proteins

 Score = 40.0 bits (94), Expect = 4e-04
 Identities = 52/201 (25%), Positives = 78/201 (38%), Gaps = 18/201 (8%)

Query: 3   GMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNK 62
           G+T Y+       P+ GE V V    G +G L  Q+A+ +G   V    S DK +L + K
Sbjct: 148 GITVYSAL-RDAGPRPGERVAVLGI-GGLGHLAVQYARAMGFETVAITRSPDKRELAR-K 204

Query: 63  FGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVGGKMLDAVLLNMRIQGRITLCGMISQ 122
            G DE  +   E D  AA      + I +     G     A+   +R  GRI L G+   
Sbjct: 205 LGADEVVDSGAELDEQAAAGGA--DVI-LVTVVSGAAAEAALGG-LRRGGRIVLVGLPES 260

Query: 123 YNNDKPEGVHNLTCLISKRIRMEGFLVPDYFHLYPKFLEMMIPRIKEGKIVYVEDKAEGL 182
                P    ++  LI KR  + G       H     L+  +    EGK+     +   L
Sbjct: 261 -----PPFSPDIFPLIMKRQSIAG-----STHGGRADLQEALDFAAEGKVK-PMIETFPL 309

Query: 183 ESAPAALVGLFSGRNVGKQVV 203
           + A  A   +  G    + V+
Sbjct: 310 DQANEAYERMEKGDVRFRFVL 330

Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes, or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 330

>gnl|CDD|176251 cd08291, ETR_like_1, 2-enoyl thioester reductase (ETR) like proteins, child 1

 Score = 39.9 bits (94), Expect = 5e-04
 Identities = 40/154 (25%), Positives = 69/154 (44%), Gaps = 12/154 (7%)

Query: 4   MTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKF 63
           +TA  G  E    +  + V  +AA+ A+G+++ +  K  G  V+     K++VDLLK K 
Sbjct: 130 LTAL-GMLETAREEGAKAVVHTAAASALGRMLVRLCKADGIKVINIVRRKEQVDLLK-KI 187

Query: 64  GFDEAFNYKEE---PDLDAALKRYFPEGINIYFENVGGKMLDAVLLNMRIQGRITLCGMI 120
           G +   N  +     DL   + +       I+F+ VGG +   +LL M     + + G +
Sbjct: 188 GAEYVLNSSDPDFLEDLKELIAK---LNATIFFDAVGGGLTGQILLAMPYGSTLYVYGYL 244

Query: 121 SQYNNDKPEGVHNLTCLISKRIRMEGFLVPDYFH 154
           S       E + +   LI K   +EGF +  +  
Sbjct: 245 S---GKLDEPI-DPVDLIFKNKSIEGFWLTTWLQ 274

2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Candida tropicalis enoyl thioester reductase (Etr1p) catalyzes the NADPH-dependent reduction of trans-2-enoyl thioesters in mitochondrial fatty acid synthesis. Etr1p forms homodimers, with each subunit containing a nucleotide-binding Rossmann fold domain and a catalytic domain. Length = 324

>gnl|CDD|176221 cd08260, Zn_ADH6, Alcohol dehydrogenases of the MDR family

 Score = 39.1 bits (92), Expect = 8e-04
 Identities = 43/209 (20%), Positives = 78/209 (37%), Gaps = 23/209 (11%)

Query: 4   MTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKF 63
            TA+         K GE+V V    G VG      A  +G  V+      DK++L + + 
Sbjct: 151 ATAFRALVHQARVKPGEWVAVHGC-GGVGLSAVMIASALGARVIAVDIDDDKLELAR-EL 208

Query: 64  GFDEAFNYKEEPDLDAALKRYFPEGINIYFENVGGKM-LDAVLLNMRIQGRITLCGMISQ 122
           G     N  E  D+ AA++     G ++  + +G        + ++R +GR    G+   
Sbjct: 209 GAVATVNASEVEDVAAAVRDLTGGGAHVSVDALGIPETCRNSVASLRKRGRHVQVGL--- 265

Query: 123 YNNDKPEGVHNLTCL-----ISKRIRMEG-FLVPDYFHLYPKFLEMMIP-RIKEGKIVYV 175
                  G      L     +++ + + G   +P   H Y   L ++   ++    +V  
Sbjct: 266 -----TLGEEAGVALPMDRVVARELEIVGSHGMPA--HRYDAMLALIASGKLDPEPLVG- 317

Query: 176 EDKAEGLESAPAALVGLFSGRNVGKQVVE 204
             +   L+ AP AL  +      G  V+ 
Sbjct: 318 --RTISLDEAPDALAAMDDYATAGITVIT 344

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group has the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 345

>gnl|CDD|176217 cd08255, 2-desacetyl-2-hydroxyethyl_bacteriochlorophyllide_like, 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide and other MDR family members

 Score = 38.0 bits (89), Expect = 0.002
 Identities = 48/203 (23%), Positives = 67/203 (33%), Gaps = 11/203 (5%)

Query: 3   GMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNK 62
             TA  G      P+ GE V V    G VG L  Q AK  G   V        VD    +
Sbjct: 83  AATALNGV-RDAEPRLGERVAVVGL-GLVGLLAAQLAKAAGAREV------VGVDPDAAR 134

Query: 63  FGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVG-GKMLDAVLLNMRIQGRITLCGMIS 121
               EA     +P            G ++  E  G    L+  L  +R +GR+ L G   
Sbjct: 135 RELAEALG-PADPVAADTADEIGGRGADVVIEASGSPSALETALRLLRDRGRVVLVGWYG 193

Query: 122 QYNNDKPEGVH-NLTCLISKRIRMEGFLVPDYFHLYPKFLEMMIPRIKEGKIVYVEDKAE 180
                  E  H     + S ++   G           + LE  +  + EG++  +     
Sbjct: 194 LKPLLLGEEFHFKRLPIRSSQVYGIGRYDRPRRWTEARNLEEALDLLAEGRLEALITHRV 253

Query: 181 GLESAPAALVGLFSGRNVGKQVV 203
             E AP A   LF       +VV
Sbjct: 254 PFEDAPEAYRLLFEDPPECLKVV 276

This subgroup of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family has members identified as 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase and alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. Length = 277

>gnl|CDD|176225 cd08264, Zn_ADH_like2, Alcohol dehydrogenases of the MDR family

 Score = 38.1 bits (89), Expect = 0.002
 Identities = 33/116 (28%), Positives = 47/116 (40%), Gaps = 12/116 (10%)

Query: 4   MTAYAGFFEV-CSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNK 62
           +TAY         P  GE V V  ASG  G    Q AK++G  V+  +        LK +
Sbjct: 149 LTAYHALKTAGLGP--GETVVVFGASGNTGIFAVQLAKMMGAEVIAVSRKDW----LK-E 201

Query: 63  FGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVGGKMLDAVLLNMRIQGRITLCG 118
           FG DE  +Y E  +    + +     IN    ++G    D  L  +   GR+   G
Sbjct: 202 FGADEVVDYDEVEEKVKEITKMADVVIN----SLGSSFWDLSLSVLGRGGRLVTFG 253

This group resembles the zinc-dependent alcohol dehydrogenases of the medium chain dehydrogenase family. However, this subgroup does not contain the characteristic catalytic zinc site. Also, it contains an atypical structural zinc-binding pattern: DxxCxxCxxxxxxxC. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 325

>gnl|CDD|176216 cd08254, hydroxyacyl_CoA_DH, 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase, N-benzyl-3-pyrrolidinol dehydrogenase, and other MDR family members

 Score = 38.0 bits (89), Expect = 0.002
 Identities = 37/146 (25%), Positives = 60/146 (41%), Gaps = 12/146 (8%)

Query: 3   GMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNK 62
            +T Y         K GE V V    G +G    Q AK +G  V+     ++K++L K +
Sbjct: 150 VLTPYHAVVRAGEVKPGETVLVIGL-GGLGLNAVQIAKAMGAAVIAVDIKEEKLELAK-E 207

Query: 63  FGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVGGK--MLDAVLLNMRIQGRITLCGMI 120
            G DE  N  ++   D         G ++ F+ VG +    DA    ++  GRI + G+ 
Sbjct: 208 LGADEVLNSLDDSPKDKKAAG-LGGGFDVIFDFVGTQPTFEDAQKA-VKPGGRIVVVGL- 264

Query: 121 SQYNNDKPEGVHNLTCLISKRIRMEG 146
                     V     LI++ +R+ G
Sbjct: 265 ----GRDKLTVDLSD-LIARELRIIG 285

This group contains enzymes of the zinc-dependent alcohol dehydrogenase family, including members (aka MDR) identified as 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase and N-benzyl-3-pyrrolidinol dehydrogenase. 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase catalyzes the conversion of 6-Hydroxycyclohex-1-enecarbonyl-CoA and NAD+ to 6-Ketoxycyclohex-1-ene-1-carboxyl-CoA,NADH, and H+. This group displays the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 338

>gnl|CDD|176198 cd08236, sugar_DH, NAD(P)-dependent sugar dehydrogenases

 Score = 36.8 bits (86), Expect = 0.004
 Identities = 27/105 (25%), Positives = 48/105 (45%), Gaps = 5/105 (4%)

Query: 16  PKQGEYVFVSAASGAVGQLVGQFAKLVGC-YVVGSAGSKDKVDLLKNKFGFDEAFNYKEE 74
              G+ V V  A G +G L  Q+ K++G   V+      +K+ + + + G D+  N KEE
Sbjct: 157 ITLGDTVVVIGA-GTIGLLAIQWLKILGAKRVIAVDIDDEKLAVAR-ELGADDTINPKEE 214

Query: 75  PDLDAALKRYFPEGINIYFENVG-GKMLDAVLLNMRIQGRITLCG 118
            D++   +     G ++  E  G    ++  L   R  G++ L G
Sbjct: 215 -DVEKVRELTEGRGADLVIEAAGSPATIEQALALARPGGKVVLVG 258

This group contains proteins identified as sorbitol dehydrogenases and other sugar dehydrogenases of the medium-chain dehydrogenase/reductase family (MDR), which includes zinc-dependent alcohol dehydrogenase and related proteins. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Related proteins include threonine dehydrogenase, formaldehyde dehydrogenase, and butanediol dehydrogenase. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Horse liver alcohol dehydrogenase is a dimeric enzyme and each subunit has two domains. The NAD binding domain is in a Rossmann fold and the catalytic domain contains a zinc ion to which substrates bind. There is a cleft between the domains that closes upon formation of the ternary complex. Length = 343

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	208
COG2130	340	Putative NADP-dependent oxidoreductases [General f	100.0
COG0604	326	Qor NADPH:quinone reductase and related Zn-depende	100.0
PLN03154	348	putative allyl alcohol dehydrogenase; Provisional	100.0
KOG1197	336	consensus Predicted quinone oxidoreductase [Energy	100.0
KOG1196	343	consensus Predicted NAD-dependent oxidoreductase [	100.0
COG1064	339	AdhP Zn-dependent alcohol dehydrogenases [General	100.0
cd08295	338	double_bond_reductase_like Arabidopsis alkenal dou	99.97
cd08294	329	leukotriene_B4_DH_like 13-PGR is a bifunctional en	99.97
TIGR02825	325	B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15	99.97
KOG1198	347	consensus Zinc-binding oxidoreductase [Energy prod	99.97
cd08293	345	PTGR2 Prostaglandin reductase. Prostaglandins and	99.97
cd08281	371	liver_ADH_like1 Zinc-dependent alcohol dehydrogena	99.96
cd08291	324	ETR_like_1 2-enoyl thioester reductase (ETR) like	99.96
PRK09880	343	L-idonate 5-dehydrogenase; Provisional	99.96
cd08239	339	THR_DH_like L-threonine dehydrogenase (TDH)-like.	99.95
TIGR03451	358	mycoS_dep_FDH mycothiol-dependent formaldehyde deh	99.95
COG1062	366	AdhC Zn-dependent alcohol dehydrogenases, class II	99.95
KOG1202	2376	consensus Animal-type fatty acid synthase and rela	99.95
PLN02827	378	Alcohol dehydrogenase-like	99.95
TIGR03201	349	dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-Co	99.95
KOG0023	360	consensus Alcohol dehydrogenase, class V [Secondar	99.95
PRK10309	347	galactitol-1-phosphate dehydrogenase; Provisional	99.95
KOG0024	354	consensus Sorbitol dehydrogenase [Secondary metabo	99.94
PLN02586	360	probable cinnamyl alcohol dehydrogenase	99.94
PLN02178	375	cinnamyl-alcohol dehydrogenase	99.94
cd08292	324	ETR_like_2 2-enoyl thioester reductase (ETR) like	99.94
cd08233	351	butanediol_DH_like (2R,3R)-2,3-butanediol dehydrog	99.94
TIGR02822	329	adh_fam_2 zinc-binding alcohol dehydrogenase famil	99.94
KOG0022	375	consensus Alcohol dehydrogenase, class III [Second	99.94
PLN02740	381	Alcohol dehydrogenase-like	99.94
KOG0025	354	consensus Zn2+-binding dehydrogenase (nuclear rece	99.94
PLN02514	357	cinnamyl-alcohol dehydrogenase	99.94
TIGR02818	368	adh_III_F_hyde S-(hydroxymethyl)glutathione dehydr	99.94
cd08300	368	alcohol_DH_class_III class III alcohol dehydrogena	99.94
cd05288	329	PGDH Prostaglandin dehydrogenases. Prostaglandins	99.93
cd05282	323	ETR_like 2-enoyl thioester reductase-like. 2-enoyl	99.93
cd08301	369	alcohol_DH_plants Plant alcohol dehydrogenase. NAD	99.93
cd08238	410	sorbose_phosphate_red L-sorbose-1-phosphate reduct	99.93
cd08244	324	MDR_enoyl_red Possible enoyl reductase. Member ide	99.93
cd08277	365	liver_alcohol_DH_like Liver alcohol dehydrogenase.	99.93
cd08246	393	crotonyl_coA_red crotonyl-CoA reductase. Crotonyl-	99.93
cd08296	333	CAD_like Cinnamyl alcohol dehydrogenases (CAD). Ci	99.93
cd08231	361	MDR_TM0436_like Hypothetical enzyme TM0436 resembl	99.93
cd08250	329	Mgc45594_like Mgc45594 gene product and other MDR	99.92
cd08274	350	MDR9 Medium chain dehydrogenases/reductase (MDR)/z	99.92
PTZ00354	334	alcohol dehydrogenase; Provisional	99.92
TIGR01751	398	crot-CoA-red crotonyl-CoA reductase. The enzyme mo	99.92
cd08290	341	ETR 2-enoyl thioester reductase (ETR). 2-enoyl thi	99.92
cd05286	320	QOR2 Quinone oxidoreductase (QOR). Quinone oxidore	99.92
cd08263	367	Zn_ADH10 Alcohol dehydrogenases of the MDR family.	99.92
cd08297	341	CAD3 Cinnamyl alcohol dehydrogenases (CAD). These	99.92
cd08240	350	6_hydroxyhexanoate_dh_like 6-hydroxyhexanoate dehy	99.92
cd08243	320	quinone_oxidoreductase_like_1 Quinone oxidoreducta	99.92
COG1063	350	Tdh Threonine dehydrogenase and related Zn-depende	99.92
TIGR02819	393	fdhA_non_GSH formaldehyde dehydrogenase, glutathio	99.91
cd08289	326	MDR_yhfp_like Yhfp putative quinone oxidoreductase	99.91
PRK10754	327	quinone oxidoreductase, NADPH-dependent; Provision	99.91
cd05284	340	arabinose_DH_like D-arabinose dehydrogenase. This	99.91
cd08260	345	Zn_ADH6 Alcohol dehydrogenases of the MDR family.	99.91
TIGR02817	336	adh_fam_1 zinc-binding alcohol dehydrogenase famil	99.91
cd05280	325	MDR_yhdh_yhfp Yhdh and yhfp-like putative quinone	99.91
TIGR02823	323	oxido_YhdH putative quinone oxidoreductase, YhdH/Y	99.91
cd08261	337	Zn_ADH7 Alcohol dehydrogenases of the MDR family.	99.91
cd08230	355	glucose_DH Glucose dehydrogenase. Glucose dehydrog	99.91
cd08285	351	NADP_ADH NADP(H)-dependent alcohol dehydrogenases.	99.91
cd08276	336	MDR7 Medium chain dehydrogenases/reductase (MDR)/z	99.9
cd08254	338	hydroxyacyl_CoA_DH 6-hydroxycyclohex-1-ene-1-carbo	99.9
cd08253	325	zeta_crystallin Zeta-crystallin with NADP-dependen	99.9
cd08270	305	MDR4 Medium chain dehydrogenases/reductase (MDR)/z	99.9
PRK09422	338	ethanol-active dehydrogenase/acetaldehyde-active r	99.9
cd08278	365	benzyl_alcohol_DH Benzyl alcohol dehydrogenase. Be	99.9
TIGR01202	308	bchC 2-desacetyl-2-hydroxyethyl bacteriochlorophyl	99.9
cd08249	339	enoyl_reductase_like enoyl_reductase_like. Member	99.9
cd08251	303	polyketide_synthase polyketide synthase. Polyketid	99.9
cd08237	341	ribitol-5-phosphate_DH ribitol-5-phosphate dehydro	99.9
cd08266	342	Zn_ADH_like1 Alcohol dehydrogenases of the MDR fam	99.9
cd08283	386	FDH_like_1 Glutathione-dependent formaldehyde dehy	99.9
cd05278	347	FDH_like Formaldehyde dehydrogenases. Formaldehyde	99.9
cd08235	343	iditol_2_DH_like L-iditol 2-dehydrogenase. Putativ	99.9
cd08256	350	Zn_ADH2 Alcohol dehydrogenases of the MDR family.	99.89
PRK13771	334	putative alcohol dehydrogenase; Provisional	99.89
cd08269	312	Zn_ADH9 Alcohol dehydrogenases of the MDR family.	99.89
TIGR02824	325	quinone_pig3 putative NAD(P)H quinone oxidoreducta	99.89
cd08286	345	FDH_like_ADH2 formaldehyde dehydrogenase (FDH)-lik	99.89
cd05276	323	p53_inducible_oxidoreductase PIG3 p53-inducible qu	99.89
cd08236	343	sugar_DH NAD(P)-dependent sugar dehydrogenases. Th	99.89
cd05285	343	sorbitol_DH Sorbitol dehydrogenase. Sorbitol and a	99.89
PRK10083	339	putative oxidoreductase; Provisional	99.89
cd08265	384	Zn_ADH3 Alcohol dehydrogenases of the MDR family.	99.89
cd08284	344	FDH_like_2 Glutathione-dependent formaldehyde dehy	99.89
TIGR03366	280	HpnZ_proposed putative phosphonate catabolism asso	99.89
cd05283	337	CAD1 Cinnamyl alcohol dehydrogenases (CAD). Cinnam	99.89
cd08262	341	Zn_ADH8 Alcohol dehydrogenases of the MDR family.	99.89
cd05195	293	enoyl_red enoyl reductase of polyketide synthase.	99.89
cd08252	336	AL_MDR Arginate lyase and other MDR family members	99.89
cd08279	363	Zn_ADH_class_III Class III alcohol dehydrogenase.	99.89
cd08241	323	QOR1 Quinone oxidoreductase (QOR). QOR catalyzes t	99.89
cd08287	345	FDH_like_ADH3 formaldehyde dehydrogenase (FDH)-lik	99.89
cd08268	328	MDR2 Medium chain dehydrogenases/reductase (MDR)/z	99.89
smart00829	288	PKS_ER Enoylreductase. Enoylreductase in Polyketid	99.88
cd08288	324	MDR_yhdh Yhdh putative quinone oxidoreductases. Yh	99.88
cd08282	375	PFDH_like Pseudomonas putida aldehyde-dismutating	99.88
cd05279	365	Zn_ADH1 Liver alcohol dehydrogenase and related zi	99.88
cd08259	332	Zn_ADH5 Alcohol dehydrogenases of the MDR family.	99.88
PF00107	130	ADH_zinc_N: Zinc-binding dehydrogenase; InterPro:	99.88
cd08272	326	MDR6 Medium chain dehydrogenases/reductase (MDR)/z	99.88
PRK05396	341	tdh L-threonine 3-dehydrogenase; Validated	99.87
TIGR00692	340	tdh L-threonine 3-dehydrogenase. E. coli His-90 mo	99.87
cd08299	373	alcohol_DH_class_I_II_IV class I, II, IV alcohol d	99.87
cd08232	339	idonate-5-DH L-idonate 5-dehydrogenase. L-idonate	99.87
cd08247	352	AST1_like AST1 is a cytoplasmic protein associated	99.87
cd08271	325	MDR5 Medium chain dehydrogenases/reductase (MDR)/z	99.86
cd08234	334	threonine_DH_like L-threonine dehydrogenase. L-thr	99.86
cd05281	341	TDH Threonine dehydrogenase. L-threonine dehydroge	99.86
cd08273	331	MDR8 Medium chain dehydrogenases/reductase (MDR)/z	99.86
cd08275	337	MDR3 Medium chain dehydrogenases/reductase (MDR)/z	99.86
cd08242	319	MDR_like Medium chain dehydrogenases/reductase (MD	99.86
cd08264	325	Zn_ADH_like2 Alcohol dehydrogenases of the MDR fam	99.85
PLN02702	364	L-idonate 5-dehydrogenase	99.85
cd08248	350	RTN4I1 Human Reticulon 4 Interacting Protein 1. Hu	99.85
cd05289	309	MDR_like_2 alcohol dehydrogenase and quinone reduc	99.84
cd08245	330	CAD Cinnamyl alcohol dehydrogenases (CAD) and rela	99.84
cd08298	329	CAD2 Cinnamyl alcohol dehydrogenases (CAD). These	99.84
cd08267	319	MDR1 Medium chain dehydrogenases/reductase (MDR)/z	99.83
cd08255	277	2-desacetyl-2-hydroxyethyl_bacteriochlorophyllide_	99.82
cd08258	306	Zn_ADH4 Alcohol dehydrogenases of the MDR family.	99.8
cd05188	271	MDR Medium chain reductase/dehydrogenase (MDR)/zin	99.76
PF13602	127	ADH_zinc_N_2: Zinc-binding dehydrogenase; PDB: 3TQ	99.75
cd00401	413	AdoHcyase S-adenosyl-L-homocysteine hydrolase (Ado	99.6
PRK09424	509	pntA NAD(P) transhydrogenase subunit alpha; Provis	99.56
TIGR00561	511	pntA NAD(P) transhydrogenase, alpha subunit. In so	98.96
COG4221	246	Short-chain alcohol dehydrogenase of unknown speci	98.84
PRK11873	272	arsM arsenite S-adenosylmethyltransferase; Reviewe	98.77
PRK05476	425	S-adenosyl-L-homocysteine hydrolase; Provisional	98.75
TIGR00518	370	alaDH alanine dehydrogenase. The family of known L	98.72
TIGR00936	406	ahcY adenosylhomocysteinase. This enzyme hydrolyze	98.68
PLN02494	477	adenosylhomocysteinase	98.67
COG3967	245	DltE Short-chain dehydrogenase involved in D-alani	98.58
PRK05786	238	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	98.56
PRK08306	296	dipicolinate synthase subunit A; Reviewed	98.56
COG0300	265	DltE Short-chain dehydrogenases of various substra	98.56
PRK08324	681	short chain dehydrogenase; Validated	98.51
PRK05993	277	short chain dehydrogenase; Provisional	98.48
PRK12742	237	oxidoreductase; Provisional	98.48
PRK06182	273	short chain dehydrogenase; Validated	98.46
PRK05693	274	short chain dehydrogenase; Provisional	98.46
PRK08265	261	short chain dehydrogenase; Provisional	98.43
KOG1205	282	consensus Predicted dehydrogenase [Secondary metab	98.36
PRK08339	263	short chain dehydrogenase; Provisional	98.32
PRK07109	334	short chain dehydrogenase; Provisional	98.31
PRK05872	296	short chain dehydrogenase; Provisional	98.31
PF01488	135	Shikimate_DH: Shikimate / quinate 5-dehydrogenase;	98.3
PRK06500	249	short chain dehydrogenase; Provisional	98.26
PRK12771	564	putative glutamate synthase (NADPH) small subunit;	98.26
PRK06484	520	short chain dehydrogenase; Validated	98.26
PRK06057	255	short chain dehydrogenase; Provisional	98.26
PRK06200	263	2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrog	98.24
PRK12829	264	short chain dehydrogenase; Provisional	98.24
PRK08261	450	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	98.23
TIGR02853	287	spore_dpaA dipicolinic acid synthetase, A subunit.	98.22
PRK06139	330	short chain dehydrogenase; Provisional	98.22
PRK07825	273	short chain dehydrogenase; Provisional	98.22
PTZ00075	476	Adenosylhomocysteinase; Provisional	98.19
TIGR03325	262	BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydro	98.19
PRK07806	248	short chain dehydrogenase; Provisional	98.19
PRK07326	237	short chain dehydrogenase; Provisional	98.17
cd05213	311	NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain	98.17
PRK07060	245	short chain dehydrogenase; Provisional	98.17
PRK06484	520	short chain dehydrogenase; Validated	98.17
PRK12939	250	short chain dehydrogenase; Provisional	98.15
PF13460	183	NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X	98.15
PRK08267	260	short chain dehydrogenase; Provisional	98.14
PRK07576	264	short chain dehydrogenase; Provisional	98.13
PRK06196	315	oxidoreductase; Provisional	98.12
PRK12828	239	short chain dehydrogenase; Provisional	98.11
PRK07062	265	short chain dehydrogenase; Provisional	98.11
PF12847	112	Methyltransf_18: Methyltransferase domain; PDB: 3G	98.11
PRK10538	248	malonic semialdehyde reductase; Provisional	98.1
PRK07063	260	short chain dehydrogenase; Provisional	98.1
PRK08017	256	oxidoreductase; Provisional	98.09
PRK05866	293	short chain dehydrogenase; Provisional	98.09
PRK07832	272	short chain dehydrogenase; Provisional	98.09
PLN03209	576	translocon at the inner envelope of chloroplast su	98.08
PRK05854	313	short chain dehydrogenase; Provisional	98.07
PRK05867	253	short chain dehydrogenase; Provisional	98.07
KOG1209	289	consensus 1-Acyl dihydroxyacetone phosphate reduct	98.07
PRK09072	263	short chain dehydrogenase; Provisional	98.07
PLN02780	320	ketoreductase/ oxidoreductase	98.06
PRK07478	254	short chain dehydrogenase; Provisional	98.06
PF02826	178	2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehy	98.06
PRK08177	225	short chain dehydrogenase; Provisional	98.05
PRK06180	277	short chain dehydrogenase; Provisional	98.05
PRK12823	260	benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylat	98.04
PRK12429	258	3-hydroxybutyrate dehydrogenase; Provisional	98.04
PRK07231	251	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	98.04
PRK06914	280	short chain dehydrogenase; Provisional	98.04
PRK07814	263	short chain dehydrogenase; Provisional	98.03
PRK06949	258	short chain dehydrogenase; Provisional	98.03
PRK09186	256	flagellin modification protein A; Provisional	98.02
PRK07831	262	short chain dehydrogenase; Provisional	98.02
PRK00045	423	hemA glutamyl-tRNA reductase; Reviewed	98.01
PRK07890	258	short chain dehydrogenase; Provisional	98.01
PRK07533	258	enoyl-(acyl carrier protein) reductase; Provisiona	98.01
PRK06128	300	oxidoreductase; Provisional	98.01
PRK05717	255	oxidoreductase; Validated	98.0
PRK07453	322	protochlorophyllide oxidoreductase; Validated	98.0
COG2518	209	Pcm Protein-L-isoaspartate carboxylmethyltransfera	97.98
PRK06841	255	short chain dehydrogenase; Provisional	97.98
PRK05876	275	short chain dehydrogenase; Provisional	97.98
PRK07523	255	gluconate 5-dehydrogenase; Provisional	97.98
PLN02253	280	xanthoxin dehydrogenase	97.97
PRK00377	198	cbiT cobalt-precorrin-6Y C(15)-methyltransferase;	97.96
PRK08217	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	97.96
PRK07904	253	short chain dehydrogenase; Provisional	97.96
COG0686	371	Ald Alanine dehydrogenase [Amino acid transport an	97.95
PRK05884	223	short chain dehydrogenase; Provisional	97.95
PF02353	273	CMAS: Mycolic acid cyclopropane synthetase; InterP	97.95
PRK07677	252	short chain dehydrogenase; Provisional	97.95
PRK07024	257	short chain dehydrogenase; Provisional	97.94
PRK06194	287	hypothetical protein; Provisional	97.94
KOG1014	312	consensus 17 beta-hydroxysteroid dehydrogenase typ	97.94
PRK06197	306	short chain dehydrogenase; Provisional	97.94
PRK06953	222	short chain dehydrogenase; Provisional	97.93
PRK06398	258	aldose dehydrogenase; Validated	97.93
PRK07067	257	sorbitol dehydrogenase; Provisional	97.93
PRK11705	383	cyclopropane fatty acyl phospholipid synthase; Pro	97.93
TIGR01832	248	kduD 2-deoxy-D-gluconate 3-dehydrogenase. This mod	97.93
PRK08340	259	glucose-1-dehydrogenase; Provisional	97.93
PRK06483	236	dihydromonapterin reductase; Provisional	97.92
PRK08594	257	enoyl-(acyl carrier protein) reductase; Provisiona	97.92
PRK06101	240	short chain dehydrogenase; Provisional	97.92
PRK09291	257	short chain dehydrogenase; Provisional	97.91
PRK08589	272	short chain dehydrogenase; Validated	97.91
PRK09242	257	tropinone reductase; Provisional	97.91
PRK06482	276	short chain dehydrogenase; Provisional	97.91
PRK08415	274	enoyl-(acyl carrier protein) reductase; Provisiona	97.91
PRK07774	250	short chain dehydrogenase; Provisional	97.9
PRK08643	256	acetoin reductase; Validated	97.9
cd01078	194	NAD_bind_H4MPT_DH NADP binding domain of methylene	97.9
PRK08213	259	gluconate 5-dehydrogenase; Provisional	97.89
PRK08085	254	gluconate 5-dehydrogenase; Provisional	97.88
PRK08862	227	short chain dehydrogenase; Provisional	97.87
PRK06138	252	short chain dehydrogenase; Provisional	97.86
PRK08251	248	short chain dehydrogenase; Provisional	97.86
PRK06505	271	enoyl-(acyl carrier protein) reductase; Provisiona	97.86
PRK06079	252	enoyl-(acyl carrier protein) reductase; Provisiona	97.86
PRK08263	275	short chain dehydrogenase; Provisional	97.86
PRK06179	270	short chain dehydrogenase; Provisional	97.86
PRK06181	263	short chain dehydrogenase; Provisional	97.85
PRK12481	251	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	97.85
PRK07035	252	short chain dehydrogenase; Provisional	97.85
PRK05875	276	short chain dehydrogenase; Provisional	97.85
PRK12937	245	short chain dehydrogenase; Provisional	97.84
PRK07454	241	short chain dehydrogenase; Provisional	97.84
PRK07985	294	oxidoreductase; Provisional	97.84
PRK06720	169	hypothetical protein; Provisional	97.83
PRK06172	253	short chain dehydrogenase; Provisional	97.83
PRK08277	278	D-mannonate oxidoreductase; Provisional	97.83
PRK08703	239	short chain dehydrogenase; Provisional	97.83
PRK08261	450	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	97.83
PRK04148	134	hypothetical protein; Provisional	97.82
PRK07666	239	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	97.82
PRK06125	259	short chain dehydrogenase; Provisional	97.81
KOG1201	300	consensus Hydroxysteroid 17-beta dehydrogenase 11	97.81
PRK13394	262	3-hydroxybutyrate dehydrogenase; Provisional	97.8
PRK07074	257	short chain dehydrogenase; Provisional	97.8
TIGR01289	314	LPOR light-dependent protochlorophyllide reductase	97.8
KOG1210	331	consensus Predicted 3-ketosphinganine reductase [S	97.8
COG4122	219	Predicted O-methyltransferase [General function pr	97.8
PRK05653	246	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	97.79
PRK06603	260	enoyl-(acyl carrier protein) reductase; Provisiona	97.79
PRK12747	252	short chain dehydrogenase; Provisional	97.78
PRK06114	254	short chain dehydrogenase; Provisional	97.78
PRK08159	272	enoyl-(acyl carrier protein) reductase; Provisiona	97.77
PRK12936	245	3-ketoacyl-(acyl-carrier-protein) reductase NodG;	97.77
PRK06198	260	short chain dehydrogenase; Provisional	97.77
PRK07791	286	short chain dehydrogenase; Provisional	97.77
COG2230	283	Cfa Cyclopropane fatty acid synthase and related m	97.77
PRK08628	258	short chain dehydrogenase; Provisional	97.76
PRK06124	256	gluconate 5-dehydrogenase; Provisional	97.76
CHL00194	317	ycf39 Ycf39; Provisional	97.76
PRK06701	290	short chain dehydrogenase; Provisional	97.76
PF00106	167	adh_short: short chain dehydrogenase alcohol dehyd	97.76
PRK07856	252	short chain dehydrogenase; Provisional	97.74
PRK06463	255	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	97.74
PRK07097	265	gluconate 5-dehydrogenase; Provisional	97.74
PLN02730	303	enoyl-[acyl-carrier-protein] reductase	97.74
PRK07889	256	enoyl-(acyl carrier protein) reductase; Provisiona	97.73
PRK12367	245	short chain dehydrogenase; Provisional	97.73
PRK06935	258	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	97.73
PRK05565	247	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	97.72
PRK08416	260	7-alpha-hydroxysteroid dehydrogenase; Provisional	97.72
PRK12746	254	short chain dehydrogenase; Provisional	97.72
PRK06113	255	7-alpha-hydroxysteroid dehydrogenase; Validated	97.71
PRK06077	252	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	97.71
COG1748	389	LYS9 Saccharopine dehydrogenase and related protei	97.7
PRK12938	246	acetyacetyl-CoA reductase; Provisional	97.7
PRK08690	261	enoyl-(acyl carrier protein) reductase; Provisiona	97.69
TIGR03206	250	benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydr	97.69
PRK08226	263	short chain dehydrogenase; Provisional	97.68
PRK12743	256	oxidoreductase; Provisional	97.68
PRK12384	259	sorbitol-6-phosphate dehydrogenase; Provisional	97.68
PRK07984	262	enoyl-(acyl carrier protein) reductase; Provisiona	97.68
PRK13943	322	protein-L-isoaspartate O-methyltransferase; Provis	97.67
PRK08303	305	short chain dehydrogenase; Provisional	97.66
PF00670	162	AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase	97.66
PRK08945	247	putative oxoacyl-(acyl carrier protein) reductase;	97.65
PRK06997	260	enoyl-(acyl carrier protein) reductase; Provisiona	97.65
PRK13940	414	glutamyl-tRNA reductase; Provisional	97.64
PRK12826	251	3-ketoacyl-(acyl-carrier-protein) reductase; Revie	97.64
KOG0725	270	consensus Reductases with broad range of substrate	97.64
TIGR01035	417	hemA glutamyl-tRNA reductase. This enzyme, togethe	97.64
PRK13942	212	protein-L-isoaspartate O-methyltransferase; Provis	97.63
PRK06940	275	short chain dehydrogenase; Provisional	97.63
PRK07775	274	short chain dehydrogenase; Provisional	97.61
PRK07424	406	bifunctional sterol desaturase/short chain dehydro	97.61
PRK08220	252	2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated	97.61
PRK08278	273	short chain dehydrogenase; Provisional	97.6
COG2242	187	CobL Precorrin-6B methylase 2 [Coenzyme metabolism	97.6
PRK05650	270	short chain dehydrogenase; Provisional	97.6
COG2226	238	UbiE Methylase involved in ubiquinone/menaquinone	97.6
TIGR01963	255	PHB_DH 3-hydroxybutyrate dehydrogenase. This model	97.59
PRK08993	253	2-deoxy-D-gluconate 3-dehydrogenase; Validated	97.59
PRK07577	234	short chain dehydrogenase; Provisional	97.59
PF01135	209	PCMT: Protein-L-isoaspartate(D-aspartate) O-methyl	97.57
PRK05599	246	hypothetical protein; Provisional	97.57
PLN02476	278	O-methyltransferase	97.57
PRK07370	258	enoyl-(acyl carrier protein) reductase; Validated	97.57
PLN00015	308	protochlorophyllide reductase	97.55
PRK05855	582	short chain dehydrogenase; Validated	97.55
PLN00141	251	Tic62-NAD(P)-related group II protein; Provisional	97.54
PRK00258	278	aroE shikimate 5-dehydrogenase; Reviewed	97.54
PRK09135	249	pteridine reductase; Provisional	97.54
PRK13944	205	protein-L-isoaspartate O-methyltransferase; Provis	97.54
PRK08063	250	enoyl-(acyl carrier protein) reductase; Provisiona	97.54
PRK09134	258	short chain dehydrogenase; Provisional	97.54
PRK07201	657	short chain dehydrogenase; Provisional	97.54
TIGR02632	676	RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alc	97.54
PRK08642	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	97.53
KOG1200	256	consensus Mitochondrial/plastidial beta-ketoacyl-A	97.53
TIGR01829	242	AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hy	97.53
PF01262	168	AlaDh_PNT_C: Alanine dehydrogenase/PNT, C-terminal	97.52
KOG1208	314	consensus Dehydrogenases with different specificit	97.52
PRK07069	251	short chain dehydrogenase; Validated	97.51
PRK08264	238	short chain dehydrogenase; Validated	97.51
PRK06523	260	short chain dehydrogenase; Provisional	97.51
PLN02781	234	Probable caffeoyl-CoA O-methyltransferase	97.5
PRK07102	243	short chain dehydrogenase; Provisional	97.49
TIGR00438	188	rrmJ cell division protein FtsJ.	97.48
TIGR02415	254	23BDH acetoin reductases. One member of this famil	97.48
PRK05557	248	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	97.47
PRK08936	261	glucose-1-dehydrogenase; Provisional	97.46
TIGR00406	288	prmA ribosomal protein L11 methyltransferase. Ribo	97.45
PLN02589	247	caffeoyl-CoA O-methyltransferase	97.45
TIGR00080	215	pimt protein-L-isoaspartate(D-aspartate) O-methylt	97.44
COG1052	324	LdhA Lactate dehydrogenase and related dehydrogena	97.42
PF01596	205	Methyltransf_3: O-methyltransferase; InterPro: IPR	97.42
PRK06171	266	sorbitol-6-phosphate 2-dehydrogenase; Provisional	97.4
PRK08309	177	short chain dehydrogenase; Provisional	97.4
PF13561	241	adh_short_C2: Enoyl-(Acyl carrier protein) reducta	97.4
PF02670	129	DXP_reductoisom: 1-deoxy-D-xylulose 5-phosphate re	97.37
PRK12745	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	97.37
PRK00107	187	gidB 16S rRNA methyltransferase GidB; Reviewed	97.36
PRK00517	250	prmA ribosomal protein L11 methyltransferase; Revi	97.36
COG0169	283	AroE Shikimate 5-dehydrogenase [Amino acid transpo	97.35
PF03435	386	Saccharop_dh: Saccharopine dehydrogenase ; InterPr	97.35
PRK03369	488	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	97.34
COG2519	256	GCD14 tRNA(1-methyladenosine) methyltransferase an	97.34
PRK08219	227	short chain dehydrogenase; Provisional	97.32
PRK07578	199	short chain dehydrogenase; Provisional	97.32
PRK12549	284	shikimate 5-dehydrogenase; Reviewed	97.31
TIGR02469	124	CbiT precorrin-6Y C5,15-methyltransferase (decarbo	97.3
TIGR02685	267	pter_reduc_Leis pteridine reductase. Pteridine red	97.3
PF05368	233	NmrA: NmrA-like family; InterPro: IPR008030 NmrA i	97.3
cd01065	155	NAD_bind_Shikimate_DH NAD(P) binding domain of Shi	97.29
PRK12935	247	acetoacetyl-CoA reductase; Provisional	97.28
PRK12548	289	shikimate 5-dehydrogenase; Provisional	97.28
TIGR00507	270	aroE shikimate 5-dehydrogenase. This model finds p	97.28
PRK00811	283	spermidine synthase; Provisional	97.28
PRK13243	333	glyoxylate reductase; Reviewed	97.26
TIGR02622	349	CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Member	97.26
PRK05447	385	1-deoxy-D-xylulose 5-phosphate reductoisomerase; P	97.26
PRK06947	248	glucose-1-dehydrogenase; Provisional	97.26
PLN02657	390	3,8-divinyl protochlorophyllide a 8-vinyl reductas	97.26
PF08704	247	GCD14: tRNA methyltransferase complex GCD14 subuni	97.25
TIGR03649	285	ergot_EASG ergot alkaloid biosynthesis protein, AF	97.25
PRK07792	306	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	97.25
PF02719	293	Polysacc_synt_2: Polysaccharide biosynthesis prote	97.25
PRK12550	272	shikimate 5-dehydrogenase; Reviewed	97.24
PRK12825	249	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	97.24
KOG1502	327	consensus Flavonol reductase/cinnamoyl-CoA reducta	97.24
PLN02366	308	spermidine synthase	97.23
COG2910	211	Putative NADH-flavin reductase [General function p	97.23
PF03807	96	F420_oxidored: NADP oxidoreductase coenzyme F420-d	97.23
PRK12744	257	short chain dehydrogenase; Provisional	97.22
PLN03075	296	nicotianamine synthase; Provisional	97.22
PRK14027	283	quinate/shikimate dehydrogenase; Provisional	97.21
PRK07041	230	short chain dehydrogenase; Provisional	97.2
PRK06123	248	short chain dehydrogenase; Provisional	97.2
PRK09730	247	putative NAD(P)-binding oxidoreductase; Provisiona	97.19
TIGR01809	282	Shik-DH-AROM shikimate-5-dehydrogenase, fungal ARO	97.18
TIGR03589	324	PseB UDP-N-acetylglucosamine 4,6-dehydratase. This	97.17
PLN02896	353	cinnamyl-alcohol dehydrogenase	97.16
PRK13656	398	trans-2-enoyl-CoA reductase; Provisional	97.16
PTZ00098	263	phosphoethanolamine N-methyltransferase; Provision	97.15
KOG1207	245	consensus Diacetyl reductase/L-xylulose reductase	97.14
TIGR01500	256	sepiapter_red sepiapterin reductase. This model de	97.13
PLN02989	325	cinnamyl-alcohol dehydrogenase family protein	97.13
PLN03139	386	formate dehydrogenase; Provisional	97.13
PRK12827	249	short chain dehydrogenase; Provisional	97.13
PRK12748	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	97.13
KOG1610	322	consensus Corticosteroid 11-beta-dehydrogenase and	97.12
PRK07023	243	short chain dehydrogenase; Provisional	97.11
PRK11207	197	tellurite resistance protein TehB; Provisional	97.11
PRK12824	245	acetoacetyl-CoA reductase; Provisional	97.1
PRK12859	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	97.09
PLN02244	340	tocopherol O-methyltransferase	97.09
PRK07402	196	precorrin-6B methylase; Provisional	97.09
PRK06718	202	precorrin-2 dehydrogenase; Reviewed	97.09
TIGR01470	205	cysG_Nterm siroheme synthase, N-terminal domain. T	97.08
PF11017	314	DUF2855: Protein of unknown function (DUF2855); In	97.06
PF01370	236	Epimerase: NAD dependent epimerase/dehydratase fam	97.04
PLN02986	322	cinnamyl-alcohol dehydrogenase family protein	97.01
PLN00016	378	RNA-binding protein; Provisional	97.01
PRK08618	325	ornithine cyclodeaminase; Validated	97.0
PRK08655	437	prephenate dehydrogenase; Provisional	97.0
PRK07574	385	formate dehydrogenase; Provisional	97.0
COG1028	251	FabG Dehydrogenases with different specificities (	96.99
TIGR03840	213	TMPT_Se_Te thiopurine S-methyltransferase, Se/Te d	96.98
PRK06719	157	precorrin-2 dehydrogenase; Validated	96.98
PRK07502	307	cyclohexadienyl dehydrogenase; Validated	96.98
PRK01581	374	speE spermidine synthase; Validated	96.98
KOG4169	261	consensus 15-hydroxyprostaglandin dehydrogenase an	96.96
PRK11036	255	putative S-adenosyl-L-methionine-dependent methylt	96.96
PRK14982	340	acyl-ACP reductase; Provisional	96.95
PRK06924	251	short chain dehydrogenase; Provisional	96.95
PLN02686	367	cinnamoyl-CoA reductase	96.95
PRK04457	262	spermidine synthase; Provisional	96.94
PRK08317	241	hypothetical protein; Provisional	96.93
COG2227	243	UbiG 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-	96.93
PRK14967	223	putative methyltransferase; Provisional	96.92
TIGR01830	239	3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) re	96.92
PF13659	117	Methyltransf_26: Methyltransferase domain; PDB: 3G	96.92
PLN02653	340	GDP-mannose 4,6-dehydratase	96.91
COG0373	414	HemA Glutamyl-tRNA reductase [Coenzyme metabolism]	96.91
KOG1199	260	consensus Short-chain alcohol dehydrogenase/3-hydr	96.9
PLN00203	519	glutamyl-tRNA reductase	96.89
PRK00312	212	pcm protein-L-isoaspartate O-methyltransferase; Re	96.87
PRK12749	288	quinate/shikimate dehydrogenase; Reviewed	96.86
cd01080	168	NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of	96.85
PF13241	103	NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_	96.84
PLN02928	347	oxidoreductase family protein	96.84
PF10727	127	Rossmann-like: Rossmann-like domain; InterPro: IPR	96.84
TIGR01831	239	fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductas	96.83
TIGR00715	256	precor6x_red precorrin-6x reductase. This enzyme w	96.83
TIGR01472	343	gmd GDP-mannose 4,6-dehydratase. Excluded from thi	96.82
PRK06849	389	hypothetical protein; Provisional	96.82
PF08659	181	KR: KR domain; InterPro: IPR013968 This domain is	96.8
PLN02214	342	cinnamoyl-CoA reductase	96.79
cd05311	226	NAD_bind_2_malic_enz NAD(P) binding domain of mali	96.79
PRK06300	299	enoyl-(acyl carrier protein) reductase; Provisiona	96.77
PLN02662	322	cinnamyl-alcohol dehydrogenase family protein	96.77
PRK15469	312	ghrA bifunctional glyoxylate/hydroxypyruvate reduc	96.77
TIGR03466	328	HpnA hopanoid-associated sugar epimerase. The sequ	96.74
PRK08125	660	bifunctional UDP-glucuronic acid decarboxylase/UDP	96.73
PRK08410	311	2-hydroxyacid dehydrogenase; Provisional	96.72
COG1090	297	Predicted nucleoside-diphosphate sugar epimerase [	96.72
PRK06550	235	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	96.69
PLN02650	351	dihydroflavonol-4-reductase	96.66
PF02254	116	TrkA_N: TrkA-N domain; InterPro: IPR003148 The reg	96.65
PRK13255	218	thiopurine S-methyltransferase; Reviewed	96.64
PRK07340	304	ornithine cyclodeaminase; Validated	96.63
PRK01683	258	trans-aconitate 2-methyltransferase; Provisional	96.63
PLN02427	386	UDP-apiose/xylose synthase	96.62
PF01209	233	Ubie_methyltran: ubiE/COQ5 methyltransferase famil	96.62
TIGR00563	426	rsmB ribosomal RNA small subunit methyltransferase	96.6
PF01113	124	DapB_N: Dihydrodipicolinate reductase, N-terminus;	96.59
cd01075	200	NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of l	96.59
PLN02240	352	UDP-glucose 4-epimerase	96.58
PRK14903	431	16S rRNA methyltransferase B; Provisional	96.54
PRK15409	323	bifunctional glyoxylate/hydroxypyruvate reductase	96.54
COG0111	324	SerA Phosphoglycerate dehydrogenase and related de	96.54
PRK12480	330	D-lactate dehydrogenase; Provisional	96.52
TIGR00477	195	tehB tellurite resistance protein TehB. Part of a	96.52
PLN00198	338	anthocyanidin reductase; Provisional	96.5
PLN02233	261	ubiquinone biosynthesis methyltransferase	96.5
PRK13403	335	ketol-acid reductoisomerase; Provisional	96.49
PRK14192	283	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.48
COG0623	259	FabI Enoyl-[acyl-carrier-protein]	96.47
PRK08287	187	cobalt-precorrin-6Y C(15)-methyltransferase; Valid	96.46
PLN02695	370	GDP-D-mannose-3',5'-epimerase	96.46
PRK10258	251	biotin biosynthesis protein BioC; Provisional	96.45
TIGR01777	292	yfcH conserved hypothetical protein TIGR01777. Thi	96.45
TIGR02752	231	MenG_heptapren 2-heptaprenyl-1,4-naphthoquinone me	96.43
TIGR02197	314	heptose_epim ADP-L-glycero-D-manno-heptose-6-epime	96.42
PRK14103	255	trans-aconitate 2-methyltransferase; Provisional	96.42
PF08241	95	Methyltransf_11: Methyltransferase domain; InterPr	96.42
smart00822	180	PKS_KR This enzymatic domain is part of bacterial	96.41
COG1179	263	Dinucleotide-utilizing enzymes involved in molybdo	96.4
PLN02520	529	bifunctional 3-dehydroquinate dehydratase/shikimat	96.4

>COG2130 Putative NADP-dependent oxidoreductases [General function prediction only]

Probab=100.00  E-value=5.6e-34  Score=207.20  Aligned_cols=206  Identities=52%  Similarity=0.898  Sum_probs=187.4

Q ss_pred             CchhhHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHH
Q 028523            1 MPGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAA   80 (208)
Q Consensus         1 ~~~~tA~~~l~~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~   80 (208)
                      +++.|||.+|.++++.++|++|+|-+|+|++|..+.|+||..|++|+.++.++++++++++++|.|.++||+.. ++.++
T Consensus       133 mpG~TAY~gLl~igqpk~GetvvVSaAaGaVGsvvgQiAKlkG~rVVGiaGg~eK~~~l~~~lGfD~~idyk~~-d~~~~  211 (340)
T COG2130         133 MPGLTAYFGLLDIGQPKAGETVVVSAAAGAVGSVVGQIAKLKGCRVVGIAGGAEKCDFLTEELGFDAGIDYKAE-DFAQA  211 (340)
T ss_pred             CchHHHHHHHHHhcCCCCCCEEEEEecccccchHHHHHHHhhCCeEEEecCCHHHHHHHHHhcCCceeeecCcc-cHHHH
Confidence            47899999999999999999999999999999999999999999999999999999999967999999999998 99999


Q ss_pred             HHhHCCCCccEEEeCCCchhHHHHHHhhccCCEEEEEecccccCCCC-CCCccchHHHhhcceeEEEeec-cccccchHH
Q 028523           81 LKRYFPEGINIYFENVGGKMLDAVLLNMRIQGRITLCGMISQYNNDK-PEGVHNLTCLISKRIRMEGFLV-PDYFHLYPK  158 (208)
Q Consensus        81 ~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~  158 (208)
                      +++..+.|+|+.||++|++.++..+..|+.++|+..+|..+.++... +........++.+.+++.|+.. ..+.....+
T Consensus       212 L~~a~P~GIDvyfeNVGg~v~DAv~~~ln~~aRi~~CG~IS~YN~~~~~~gp~~l~~l~~kr~~v~Gfiv~~~~~~~~~e  291 (340)
T COG2130         212 LKEACPKGIDVYFENVGGEVLDAVLPLLNLFARIPVCGAISQYNAPELPPGPRRLPLLMAKRLRVQGFIVASDYDQRFPE  291 (340)
T ss_pred             HHHHCCCCeEEEEEcCCchHHHHHHHhhccccceeeeeehhhcCCCCCCCCcchhhHHHhhhheeEEEEechhhhhhhHH
Confidence            99999999999999999999999999999999999999999887542 3333445566677899999998 445666679


Q ss_pred             HHHHHHHHHHCCCceeeeeeeecCCcHHHHHHHHhcCCccceEEEEecC
Q 028523          159 FLEMMIPRIKEGKIVYVEDKAEGLESAPAALVGLFSGRNVGKQVVEVAT  207 (208)
Q Consensus       159 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~~~  207 (208)
                      .++++..++.+|+|+...+.+-.||++++||.-+-+|+..||.|+++.+
T Consensus       292 ~~~~l~~wv~~GKi~~~eti~dGlEnaP~Af~gLl~G~N~GK~vvKv~~  340 (340)
T COG2130         292 ALRELGGWVKEGKIQYRETIVDGLENAPEAFIGLLSGKNFGKLVVKVAD  340 (340)
T ss_pred             HHHHHHHHHHcCceeeEeeehhhhhccHHHHHHHhcCCccceEEEEecC
Confidence            9999999999999999887777899999999999999999999999864

>COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]

Probab=100.00  E-value=3.8e-33  Score=213.83  Aligned_cols=198  Identities=32%  Similarity=0.490  Sum_probs=169.6

Q ss_pred             chhhHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHHH
Q 028523            2 PGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAAL   81 (208)
Q Consensus         2 ~~~tA~~~l~~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~~   81 (208)
                      +++|||++|....++++|++|||+||+|+||.+++|+||++|+++++++.++++.++++ ++|++++++|++. ++.+++
T Consensus       126 ~~~TA~~~l~~~~~l~~g~~VLV~gaaGgVG~~aiQlAk~~G~~~v~~~~s~~k~~~~~-~lGAd~vi~y~~~-~~~~~v  203 (326)
T COG0604         126 AGLTAWLALFDRAGLKPGETVLVHGAAGGVGSAAIQLAKALGATVVAVVSSSEKLELLK-ELGADHVINYREE-DFVEQV  203 (326)
T ss_pred             HHHHHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHHHHH-hcCCCEEEcCCcc-cHHHHH
Confidence            57899999999999999999999999999999999999999987777777888888888 9999999999988 899999


Q ss_pred             HhHCCC-CccEEEeCCCchhHHHHHHhhccCCEEEEEecccccCCCCCCCccchHHHhhcceeEEEeecccc-ccchHHH
Q 028523           82 KRYFPE-GINIYFENVGGKMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCLISKRIRMEGFLVPDY-FHLYPKF  159 (208)
Q Consensus        82 ~~~~~~-~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~  159 (208)
                      ++++++ ++|+|+|++|++.+..++.+|+++|+++.+|..++    ......+...++.+.+...+...... ++...+.
T Consensus       204 ~~~t~g~gvDvv~D~vG~~~~~~~l~~l~~~G~lv~ig~~~g----~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~  279 (326)
T COG0604         204 RELTGGKGVDVVLDTVGGDTFAASLAALAPGGRLVSIGALSG----GPPVPLNLLPLLGKRLTLRGVTLGSRDPEALAEA  279 (326)
T ss_pred             HHHcCCCCceEEEECCCHHHHHHHHHHhccCCEEEEEecCCC----CCccccCHHHHhhccEEEEEecceecchHHHHHH
Confidence            999998 89999999999999999999999999999999773    12233445667777888887776543 3445678


Q ss_pred             HHHHHHHHHCCCceeeeeeeecCCcHHHHHHHHhc-CCccceEEEEe
Q 028523          160 LEMMIPRIKEGKIVYVEDKAEGLESAPAALVGLFS-GRNVGKQVVEV  205 (208)
Q Consensus       160 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~-~~~~gk~vv~~  205 (208)
                      +.++.+++++|.+++.++.+||+++..++..+... ++..||+|+++
T Consensus       280 ~~~l~~~~~~g~l~~~i~~~~~l~e~~~a~a~~~~~~~~~GKvvl~~  326 (326)
T COG0604         280 LAELFDLLASGKLKPVIDRVYPLAEAPAAAAHLLLERRTTGKVVLKV  326 (326)
T ss_pred             HHHHHHHHHcCCCcceeccEechhhhHHHHHHHHcccCCcceEEEeC
Confidence            89999999999999999999999996555544444 48899999974

>PLN03154 putative allyl alcohol dehydrogenase; Provisional

Probab=100.00  E-value=4.7e-33  Score=216.46  Aligned_cols=207  Identities=75%  Similarity=1.219  Sum_probs=173.5

Q ss_pred             chhhHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHHH
Q 028523            2 PGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAAL   81 (208)
Q Consensus         2 ~~~tA~~~l~~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~~   81 (208)
                      +++|||+++.+.+++++|++|||+|++|++|++++|+|+.+|++|+++++++++.+.+++++|++.++++++.+++.+.+
T Consensus       142 ~~~TA~~al~~~~~~~~g~~VlV~GaaG~vG~~aiqlAk~~G~~Vi~~~~~~~k~~~~~~~lGa~~vi~~~~~~~~~~~i  221 (348)
T PLN03154        142 AGFTAYAGFYEVCSPKKGDSVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDEAFNYKEEPDLDAAL  221 (348)
T ss_pred             HHHHHHHHHHHhcCCCCCCEEEEecCccHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHhcCCCEEEECCCcccHHHHH
Confidence            67899999988889999999999999999999999999999999999999999999886469999999987532677778


Q ss_pred             HhHCCCCccEEEeCCCchhHHHHHHhhccCCEEEEEecccccCCCCCCCccchHHHhhcceeEEEeeccccccchHHHHH
Q 028523           82 KRYFPEGINIYFENVGGKMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCLISKRIRMEGFLVPDYFHLYPKFLE  161 (208)
Q Consensus        82 ~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  161 (208)
                      ++.+++++|++||++|+..+..++++++++|+++.+|...+..........+...++.+++++.|+....+.....+.++
T Consensus       222 ~~~~~~gvD~v~d~vG~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~k~~~i~g~~~~~~~~~~~~~~~  301 (348)
T PLN03154        222 KRYFPEGIDIYFDNVGGDMLDAALLNMKIHGRIAVCGMVSLNSLSASQGIHNLYNLISKRIRMQGFLQSDYLHLFPQFLE  301 (348)
T ss_pred             HHHCCCCcEEEEECCCHHHHHHHHHHhccCCEEEEECccccCCCCCCCCcccHHHHhhccceEEEEEHHHHHHHHHHHHH
Confidence            77776689999999998899999999999999999997653211100011244567778899998876544333356788


Q ss_pred             HHHHHHHCCCceeeeeeeecCCcHHHHHHHHhcCCccceEEEEecCC
Q 028523          162 MMIPRIKEGKIVYVEDKAEGLESAPAALVGLFSGRNVGKQVVEVATE  208 (208)
Q Consensus       162 ~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~~~~  208 (208)
                      ++++++++|++++.++.+++|+++++|++.+++++..||+||++.+|
T Consensus       302 ~~~~l~~~G~l~~~~~~~~~L~~~~~A~~~l~~g~~~GKvVl~~~~~  348 (348)
T PLN03154        302 NVSRYYKQGKIVYIEDMSEGLESAPAALVGLFSGKNVGKQVIRVAKE  348 (348)
T ss_pred             HHHHHHHCCCccCceecccCHHHHHHHHHHHHcCCCCceEEEEecCC
Confidence            99999999999998888899999999999999999999999999765

>KOG1197 consensus Predicted quinone oxidoreductase [Energy production and conversion; General function prediction only]

Probab=100.00  E-value=3.6e-33  Score=198.18  Aligned_cols=200  Identities=24%  Similarity=0.348  Sum_probs=174.5

Q ss_pred             chhhHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHHH
Q 028523            2 PGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAAL   81 (208)
Q Consensus         2 ~~~tA~~~l~~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~~   81 (208)
                      .++|||..+++...+++|++||++.|.|++|++++|+++..|++++.++.+.++.+.++ +.|+.+.|+|+.. |+.+++
T Consensus       130 q~lTAy~ll~e~y~vkpGhtVlvhaAAGGVGlll~Ql~ra~~a~tI~~asTaeK~~~ak-enG~~h~I~y~~e-D~v~~V  207 (336)
T KOG1197|consen  130 QGLTAYMLLFEAYNVKPGHTVLVHAAAGGVGLLLCQLLRAVGAHTIATASTAEKHEIAK-ENGAEHPIDYSTE-DYVDEV  207 (336)
T ss_pred             HHHHHHHHHHHhcCCCCCCEEEEEeccccHHHHHHHHHHhcCcEEEEEeccHHHHHHHH-hcCCcceeeccch-hHHHHH
Confidence            47899999999999999999999999999999999999999999999999999999999 9999999999998 999999


Q ss_pred             HhHCCC-CccEEEeCCCchhHHHHHHhhccCCEEEEEecccccCCCCCCCccchHHHhhcceeEEEeecccc---ccchH
Q 028523           82 KRYFPE-GINIYFENVGGKMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCLISKRIRMEGFLVPDY---FHLYP  157 (208)
Q Consensus        82 ~~~~~~-~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~  157 (208)
                      ++++++ |+|+++|.+|.+.+...+.+|++.|.++.+|..++.     ..+.++..+-.+++.+....+..+   +....
T Consensus       208 ~kiTngKGVd~vyDsvG~dt~~~sl~~Lk~~G~mVSfG~asgl-----~~p~~l~~ls~k~l~lvrpsl~gYi~g~~el~  282 (336)
T KOG1197|consen  208 KKITNGKGVDAVYDSVGKDTFAKSLAALKPMGKMVSFGNASGL-----IDPIPLNQLSPKALQLVRPSLLGYIDGEVELV  282 (336)
T ss_pred             HhccCCCCceeeeccccchhhHHHHHHhccCceEEEeccccCC-----CCCeehhhcChhhhhhccHhhhcccCCHHHHH
Confidence            999987 999999999999999999999999999999998763     223334444455665554444333   33344


Q ss_pred             HHHHHHHHHHHCCCceeeeeeeecCCcHHHHHHHHhcCCccceEEEEecCC
Q 028523          158 KFLEMMIPRIKEGKIVYVEDKAEGLESAPAALVGLFSGRNVGKQVVEVATE  208 (208)
Q Consensus       158 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~~~~  208 (208)
                      ....++..++.+|.+++.+.++|||+++.+|+..+++....||+++.+.+|
T Consensus       283 ~~v~rl~alvnsg~lk~~I~~~ypls~vadA~~diesrktvGkvlLlp~~~  333 (336)
T KOG1197|consen  283 SYVARLFALVNSGHLKIHIDHVYPLSKVADAHADIESRKTVGKVLLLPGPE  333 (336)
T ss_pred             HHHHHHHHHhhcCccceeeeeecchHHHHHHHHHHHhhhccceEEEeCCcc
Confidence            567778889999999999999999999999999999999999999988764

>KOG1196 consensus Predicted NAD-dependent oxidoreductase [General function prediction only]

Probab=100.00  E-value=2.5e-31  Score=192.87  Aligned_cols=208  Identities=77%  Similarity=1.289  Sum_probs=193.6

Q ss_pred             CchhhHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHH
Q 028523            1 MPGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAA   80 (208)
Q Consensus         1 ~~~~tA~~~l~~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~   80 (208)
                      ++++|||..+.+++..++|++|+|-||+|++|+.+.|+|+.+|++|+.++.|+++...+++++|.+..+||.++.+..++
T Consensus       136 m~glTAy~Gf~ei~~pk~geTv~VSaAsGAvGql~GQ~Ak~~Gc~VVGsaGS~EKv~ll~~~~G~d~afNYK~e~~~~~a  215 (343)
T KOG1196|consen  136 MPGLTAYAGFYEICSPKKGETVFVSAASGAVGQLVGQFAKLMGCYVVGSAGSKEKVDLLKTKFGFDDAFNYKEESDLSAA  215 (343)
T ss_pred             CchhHHHHHHHHhcCCCCCCEEEEeeccchhHHHHHHHHHhcCCEEEEecCChhhhhhhHhccCCccceeccCccCHHHH
Confidence            47899999999999999999999999999999999999999999999999999999999989999999999987789999


Q ss_pred             HHhHCCCCccEEEeCCCchhHHHHHHhhccCCEEEEEecccccCCCCCCCccchHHHhhcceeEEEeeccccccchHHHH
Q 028523           81 LKRYFPEGINIYFENVGGKMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCLISKRIRMEGFLVPDYFHLYPKFL  160 (208)
Q Consensus        81 ~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (208)
                      +++..+.|+|+-||.+|+..++..+..|+..||++.+|..+.++.+.+..-.+....+.+++++.|+....+.+.+.+.+
T Consensus       216 L~r~~P~GIDiYfeNVGG~~lDavl~nM~~~gri~~CG~ISqYN~~~~~~~~~l~~ii~Kr~~iqgflv~d~~d~~~k~l  295 (343)
T KOG1196|consen  216 LKRCFPEGIDIYFENVGGKMLDAVLLNMNLHGRIAVCGMISQYNLENPEGLHNLSTIIYKRIRIQGFLVSDYLDKYPKFL  295 (343)
T ss_pred             HHHhCCCcceEEEeccCcHHHHHHHHhhhhccceEeeeeehhccccCCccccchhhheeeeEEeeeEEeechhhhhHHHH
Confidence            99988889999999999999999999999999999999999888777766667788889999999988888888888999


Q ss_pred             HHHHHHHHCCCceeeeeeeecCCcHHHHHHHHhcCCccceEEEEecCC
Q 028523          161 EMMIPRIKEGKIVYVEDKAEGLESAPAALVGLFSGRNVGKQVVEVATE  208 (208)
Q Consensus       161 ~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~~~~  208 (208)
                      +.+..++.+|+|+-.-+..-.|++.+.|+.-|.+|+..||.++.+..|
T Consensus       296 d~l~~~ikegKI~y~edi~~Glen~P~A~vglf~GkNvGKqiv~va~E  343 (343)
T KOG1196|consen  296 DFLLPYIKEGKITYVEDIADGLENGPSALVGLFHGKNVGKQLVKVARE  343 (343)
T ss_pred             HHHHHHHhcCceEEehhHHHHHhccHHHHHHHhccCcccceEEEeecC
Confidence            999999999999988776678999999999999999999999998754

>COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only]

Probab=100.00  E-value=4.4e-31  Score=198.80  Aligned_cols=188  Identities=28%  Similarity=0.387  Sum_probs=168.3

Q ss_pred             chhhHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHHH
Q 028523            2 PGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAAL   81 (208)
Q Consensus         2 ~~~tA~~~l~~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~~   81 (208)
                      ++.|.|++|.+ .++++|++|+|+|+ |++|++++|+|+++|++|+++++++++.+.++ ++|++++++.++. +..+.+
T Consensus       151 aGiT~y~alk~-~~~~pG~~V~I~G~-GGlGh~avQ~Aka~ga~Via~~~~~~K~e~a~-~lGAd~~i~~~~~-~~~~~~  226 (339)
T COG1064         151 AGITTYRALKK-ANVKPGKWVAVVGA-GGLGHMAVQYAKAMGAEVIAITRSEEKLELAK-KLGADHVINSSDS-DALEAV  226 (339)
T ss_pred             CeeeEeeehhh-cCCCCCCEEEEECC-cHHHHHHHHHHHHcCCeEEEEeCChHHHHHHH-HhCCcEEEEcCCc-hhhHHh
Confidence            57799999955 89999999999997 79999999999999999999999999999999 9999999998754 676666


Q ss_pred             HhHCCCCccEEEeCCCchhHHHHHHhhccCCEEEEEecccccCCCCCCCccchHHHhhcceeEEEeeccccccchHHHHH
Q 028523           82 KRYFPEGINIYFENVGGKMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCLISKRIRMEGFLVPDYFHLYPKFLE  161 (208)
Q Consensus        82 ~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  161 (208)
                      ++.    +|+++|+++...++..++.|+++|+++++|.+..    .+....+...++.+++++.|+...+     +..++
T Consensus       227 ~~~----~d~ii~tv~~~~~~~~l~~l~~~G~~v~vG~~~~----~~~~~~~~~~li~~~~~i~GS~~g~-----~~d~~  293 (339)
T COG1064         227 KEI----ADAIIDTVGPATLEPSLKALRRGGTLVLVGLPGG----GPIPLLPAFLLILKEISIVGSLVGT-----RADLE  293 (339)
T ss_pred             Hhh----CcEEEECCChhhHHHHHHHHhcCCEEEEECCCCC----cccCCCCHHHhhhcCeEEEEEecCC-----HHHHH
Confidence            653    9999999997799999999999999999999741    1233456777889999999999987     77799


Q ss_pred             HHHHHHHCCCceeeeeeeecCCcHHHHHHHHhcCCccceEEEEec
Q 028523          162 MMIPRIKEGKIVYVEDKAEGLESAPAALVGLFSGRNVGKQVVEVA  206 (208)
Q Consensus       162 ~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~~  206 (208)
                      +++++..+|.++|.+.++++++++++|++.|.+++..||.||.+.
T Consensus       294 e~l~f~~~g~Ikp~i~e~~~l~~in~A~~~m~~g~v~gR~Vi~~~  338 (339)
T COG1064         294 EALDFAAEGKIKPEILETIPLDEINEAYERMEKGKVRGRAVIDMS  338 (339)
T ss_pred             HHHHHHHhCCceeeEEeeECHHHHHHHHHHHHcCCeeeEEEecCC
Confidence            999999999999999888999999999999999999999999875

>cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase

Probab=99.97  E-value=5.9e-30  Score=198.71  Aligned_cols=204  Identities=76%  Similarity=1.245  Sum_probs=166.9

Q ss_pred             chhhHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHHH
Q 028523            2 PGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAAL   81 (208)
Q Consensus         2 ~~~tA~~~l~~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~~   81 (208)
                      +++|||+++.+.+++++|++|||+|++|++|++++|+|+.+|++|+++++++++.+.+++.+|++.++++.+.+++.+.+
T Consensus       135 ~~~tA~~~l~~~~~~~~g~~VlI~Ga~G~vG~~aiqlAk~~G~~Vi~~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~i  214 (338)
T cd08295         135 PGLTAYAGFYEVCKPKKGETVFVSAASGAVGQLVGQLAKLKGCYVVGSAGSDEKVDLLKNKLGFDDAFNYKEEPDLDAAL  214 (338)
T ss_pred             HHHHHHHHHHHhcCCCCCCEEEEecCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCceeEEcCCcccHHHHH
Confidence            56899999988889999999999999999999999999999999999999999999998339999999976432677777


Q ss_pred             HhHCCCCccEEEeCCCchhHHHHHHhhccCCEEEEEecccccCCCCCCCccchHHHhhcceeEEEeeccccccchHHHHH
Q 028523           82 KRYFPEGINIYFENVGGKMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCLISKRIRMEGFLVPDYFHLYPKFLE  161 (208)
Q Consensus        82 ~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  161 (208)
                      ++.+++++|++||++|+..+..++++++++|+++.+|...+..........+....+.+++++.++.....+....+.++
T Consensus       215 ~~~~~~gvd~v~d~~g~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~  294 (338)
T cd08295         215 KRYFPNGIDIYFDNVGGKMLDAVLLNMNLHGRIAACGMISQYNLEWPEGVRNLLNIIYKRVKIQGFLVGDYLHRYPEFLE  294 (338)
T ss_pred             HHhCCCCcEEEEECCCHHHHHHHHHHhccCcEEEEecccccCCCCCCCCccCHHHHhhccceeeEEEehhhHHHHHHHHH
Confidence            77765689999999999899999999999999999987543211000011223455667778877665444333456788


Q ss_pred             HHHHHHHCCCceeeeeeeecCCcHHHHHHHHhcCCccceEEEEe
Q 028523          162 MMIPRIKEGKIVYVEDKAEGLESAPAALVGLFSGRNVGKQVVEV  205 (208)
Q Consensus       162 ~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~  205 (208)
                      ++++++.+|.+++.+..+|+++++.+|++.+++++..||+|+++
T Consensus       295 ~~~~l~~~g~l~~~~~~~~~l~~~~~A~~~~~~~~~~GkvVl~~  338 (338)
T cd08295         295 EMSGYIKEGKLKYVEDIADGLESAPEAFVGLFTGSNIGKQVVKV  338 (338)
T ss_pred             HHHHHHHCCCeEceeecccCHHHHHHHHHHHhcCCCCceEEEEC
Confidence            89999999999988777899999999999999999899999874

This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in

>cd08294 leukotriene_B4_DH_like 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity

Probab=99.97  E-value=6.2e-30  Score=197.83  Aligned_cols=202  Identities=49%  Similarity=0.878  Sum_probs=168.2

Q ss_pred             chhhHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHHH
Q 028523            2 PGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAAL   81 (208)
Q Consensus         2 ~~~tA~~~l~~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~~   81 (208)
                      +++|||+++.+.+++++|++|||+||+|++|++++|+|+..|++|+++++++++.+.++ ++|++.++++++. ++.+++
T Consensus       127 ~~~ta~~al~~~~~~~~g~~vlI~ga~g~vG~~aiqlA~~~G~~vi~~~~s~~~~~~l~-~~Ga~~vi~~~~~-~~~~~v  204 (329)
T cd08294         127 PGLTAYFGLLEICKPKAGETVVVNGAAGAVGSLVGQIAKIKGCKVIGCAGSDDKVAWLK-ELGFDAVFNYKTV-SLEEAL  204 (329)
T ss_pred             HHHHHHHHHHHhcCCCCCCEEEEecCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-HcCCCEEEeCCCc-cHHHHH
Confidence            57899999988899999999999999999999999999999999999999999999999 8999999999876 888888


Q ss_pred             HhHCCCCccEEEeCCCchhHHHHHHhhccCCEEEEEecccccCCCCCC-CccchHHHhhcceeEEEeeccccccchHHHH
Q 028523           82 KRYFPEGINIYFENVGGKMLDAVLLNMRIQGRITLCGMISQYNNDKPE-GVHNLTCLISKRIRMEGFLVPDYFHLYPKFL  160 (208)
Q Consensus        82 ~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (208)
                      ++.+++++|++||++|++.+..++++++++|+++.+|.....+..... ..........+++++.++....+.....+.+
T Consensus       205 ~~~~~~gvd~vld~~g~~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~  284 (329)
T cd08294         205 KEAAPDGIDCYFDNVGGEFSSTVLSHMNDFGRVAVCGSISTYNDKEPKKGPYVQETIIFKQLKMEGFIVYRWQDRWPEAL  284 (329)
T ss_pred             HHHCCCCcEEEEECCCHHHHHHHHHhhccCCEEEEEcchhccCCCCCCcCcccHHHHhhhcceEEEEEhhhhHHHHHHHH
Confidence            877766899999999999999999999999999999864322111010 1122345566788888766544323345678


Q ss_pred             HHHHHHHHCCCceeeeeeeecCCcHHHHHHHHhcCCccceEEEEe
Q 028523          161 EMMIPRIKEGKIVYVEDKAEGLESAPAALVGLFSGRNVGKQVVEV  205 (208)
Q Consensus       161 ~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~  205 (208)
                      +++++++++|.+++.+..+++++++.+|++.+.+++..||+|+++
T Consensus       285 ~~~~~l~~~g~i~~~~~~~~~l~~~~~A~~~~~~~~~~gkvvv~~  329 (329)
T cd08294         285 KQLLKWIKEGKLKYREHVTEGFENMPQAFIGMLKGENTGKAIVKV  329 (329)
T ss_pred             HHHHHHHHCCCCcCCcccccCHHHHHHHHHHHHcCCCCCeEEEeC
Confidence            889999999999987667899999999999999999899999874

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of ac

>TIGR02825 B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase

Probab=99.97  E-value=6.5e-30  Score=197.50  Aligned_cols=202  Identities=48%  Similarity=0.812  Sum_probs=164.7

Q ss_pred             chhhHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHHH
Q 028523            2 PGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAAL   81 (208)
Q Consensus         2 ~~~tA~~~l~~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~~   81 (208)
                      +++|||+++.+.+++++|++|||+|++|++|++++|+|+..|++|+++++++++.+.++ ++|++.++++++.+.+.+.+
T Consensus       122 ~~~TA~~~l~~~~~~~~g~~VLI~ga~g~vG~~aiqlAk~~G~~Vi~~~~s~~~~~~~~-~lGa~~vi~~~~~~~~~~~~  200 (325)
T TIGR02825       122 PGLTAYFGLLEICGVKGGETVMVNAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKVAYLK-KLGFDVAFNYKTVKSLEETL  200 (325)
T ss_pred             HHHHHHHHHHHHhCCCCCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-HcCCCEEEeccccccHHHHH
Confidence            57899999988899999999999999999999999999999999999999999999998 89999999988642566666


Q ss_pred             HhHCCCCccEEEeCCCchhHHHHHHhhccCCEEEEEecccccCCCCC-CCccchHHHhhcceeEEEeecccc-ccchHHH
Q 028523           82 KRYFPEGINIYFENVGGKMLDAVLLNMRIQGRITLCGMISQYNNDKP-EGVHNLTCLISKRIRMEGFLVPDY-FHLYPKF  159 (208)
Q Consensus        82 ~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~  159 (208)
                      +...++++|++||++|++.+..++++++++|+++.+|...+...... .........+.+++++.++....+ .....+.
T Consensus       201 ~~~~~~gvdvv~d~~G~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~  280 (325)
T TIGR02825       201 KKASPDGYDCYFDNVGGEFSNTVIGQMKKFGRIAICGAISTYNRTGPLPPGPPPEIVIYQELRMEGFIVNRWQGEVRQKA  280 (325)
T ss_pred             HHhCCCCeEEEEECCCHHHHHHHHHHhCcCcEEEEecchhhcccCCCCCCCcchHHHhhhcceEeEEEehhhhhhhhHHH
Confidence            66665589999999998888999999999999999987543211001 111123345567778777765433 2233567


Q ss_pred             HHHHHHHHHCCCceeeeeeeecCCcHHHHHHHHhcCCccceEEEE
Q 028523          160 LEMMIPRIKEGKIVYVEDKAEGLESAPAALVGLFSGRNVGKQVVE  204 (208)
Q Consensus       160 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~  204 (208)
                      ++++++++.+|.+++.+..+++++++.+|++.+++++..||+|+.
T Consensus       281 ~~~~~~l~~~g~l~~~~~~~~~l~~~~~A~~~~~~~~~~gkvVv~  325 (325)
T TIGR02825       281 LKELLKWVLEGKIQYKEYVIEGFENMPAAFMGMLKGENLGKTIVK  325 (325)
T ss_pred             HHHHHHHHHCCCcccceeccccHHHHHHHHHHHhcCCCCCeEEeC
Confidence            889999999999998877889999999999999999989999973

Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase.

>KOG1198 consensus Zinc-binding oxidoreductase [Energy production and conversion; General function prediction only]

Probab=99.97  E-value=1.2e-29  Score=194.75  Aligned_cols=202  Identities=27%  Similarity=0.389  Sum_probs=159.1

Q ss_pred             chhhHHHHHHHhc------CCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeEecCCCc
Q 028523            2 PGMTAYAGFFEVC------SPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEP   75 (208)
Q Consensus         2 ~~~tA~~~l~~~~------~~~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~   75 (208)
                      +++|||.+|...+      ++++|++|||+||+|++|++++|+|++.++..+++++|+++.+.++ ++|++.++||++. 
T Consensus       135 ~~~tA~~al~~~~~~~~~~~~~~g~~vLv~ggsggVG~~aiQlAk~~~~~~v~t~~s~e~~~l~k-~lGAd~vvdy~~~-  212 (347)
T KOG1198|consen  135 AALTALSALFQLAPGKRSKKLSKGKSVLVLGGSGGVGTAAIQLAKHAGAIKVVTACSKEKLELVK-KLGADEVVDYKDE-  212 (347)
T ss_pred             HHHHHHHHHHhccccccccccCCCCeEEEEeCCcHHHHHHHHHHHhcCCcEEEEEcccchHHHHH-HcCCcEeecCCCH-
Confidence            5789999999999      9999999999999999999999999999975555555999999999 9999999999997 


Q ss_pred             cHHHHHHhHCCCCccEEEeCCCchhHHHHHHhhccCCEEEEEecccccCCCCCCCccchHHHhhcceeEEEeecccc---
Q 028523           76 DLDAALKRYFPEGINIYFENVGGKMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCLISKRIRMEGFLVPDY---  152 (208)
Q Consensus        76 ~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---  152 (208)
                      ++.+.+++.+.++||+||||+|+........++..+|+...++...+...+.+.. ..+...........+.....+   
T Consensus       213 ~~~e~~kk~~~~~~DvVlD~vg~~~~~~~~~~l~~~g~~~~i~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~  291 (347)
T KOG1198|consen  213 NVVELIKKYTGKGVDVVLDCVGGSTLTKSLSCLLKGGGGAYIGLVGDELANYKLD-DLWQSANGIKLYSLGLKGVNYRWL  291 (347)
T ss_pred             HHHHHHHhhcCCCccEEEECCCCCccccchhhhccCCceEEEEeccccccccccc-cchhhhhhhhheeeeeeccceeee
Confidence            9999999988459999999999988888889999888755555544322221111 001101111111111111111   


Q ss_pred             -ccchHHHHHHHHHHHHCCCceeeeeeeecCCcHHHHHHHHhcCCccceEEEEec
Q 028523          153 -FHLYPKFLEMMIPRIKEGKIVYVEDKAEGLESAPAALVGLFSGRNVGKQVVEVA  206 (208)
Q Consensus       153 -~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~~  206 (208)
                       .....+.++.+.+++++|+++|.+.+.||++++.+|++.+.++...||+++++.
T Consensus       292 ~~~~~~~~l~~l~~~ie~gkikp~i~~~~p~~~~~ea~~~~~~~~~~GK~vl~~~  346 (347)
T KOG1198|consen  292 YFVPSAEYLKALVELIEKGKIKPVIDSVYPFSQAKEAFEKLEKSHATGKVVLEKD  346 (347)
T ss_pred             eecCCHHHHHHHHHHHHcCcccCCcceeeeHHHHHHHHHHHhhcCCcceEEEEec
Confidence             344478899999999999999999999999999999999999999999999875

>cd08293 PTGR2 Prostaglandin reductase

Probab=99.97  E-value=2.2e-28  Score=190.40  Aligned_cols=203  Identities=41%  Similarity=0.702  Sum_probs=159.6

Q ss_pred             chhhHHHHHHHhcCCCCC--CEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHH
Q 028523            2 PGMTAYAGFFEVCSPKQG--EYVFVSAASGAVGQLVGQFAKLVGC-YVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLD   78 (208)
Q Consensus         2 ~~~tA~~~l~~~~~~~~g--~~vli~ga~g~vG~~a~qla~~~g~-~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~   78 (208)
                      +++|||+++.+.+++++|  ++|||+|++|++|++++|+|+++|+ +|+++++++++.+.+++++|++.++++++. ++.
T Consensus       136 ~~~ta~~al~~~~~~~~g~~~~VlI~ga~g~vG~~aiqlAk~~G~~~Vi~~~~s~~~~~~~~~~lGa~~vi~~~~~-~~~  214 (345)
T cd08293         136 PGLTALIGIQEKGHITPGANQTMVVSGAAGACGSLAGQIGRLLGCSRVVGICGSDEKCQLLKSELGFDAAINYKTD-NVA  214 (345)
T ss_pred             HHHHHHHHHHHhccCCCCCCCEEEEECCCcHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHhcCCcEEEECCCC-CHH
Confidence            578999999888888877  9999999999999999999999999 899999999999998845999999999876 888


Q ss_pred             HHHHhHCCCCccEEEeCCCchhHHHHHHhhccCCEEEEEecccccCCCCCC-Cccc--hHH-HhhcceeEEEeecccccc
Q 028523           79 AALKRYFPEGINIYFENVGGKMLDAVLLNMRIQGRITLCGMISQYNNDKPE-GVHN--LTC-LISKRIRMEGFLVPDYFH  154 (208)
Q Consensus        79 ~~~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~-~~~~--~~~-~~~~~~~~~~~~~~~~~~  154 (208)
                      +.+++.+++++|++||++|++.+..++++|+++|+++.+|........... ....  ... .+.+++++..+.....+.
T Consensus       215 ~~i~~~~~~gvd~vid~~g~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  294 (345)
T cd08293         215 ERLRELCPEGVDVYFDNVGGEISDTVISQMNENSHIILCGQISQYNKDVPYPPPLPEATEAILKERNITRERFLVLNYKD  294 (345)
T ss_pred             HHHHHHCCCCceEEEECCCcHHHHHHHHHhccCCEEEEEeeeecccCccCccccccchhHHHhhhcceEEEEEEeeccHh
Confidence            888887766899999999988889999999999999999864321100000 0111  011 123445544443323333


Q ss_pred             chHHHHHHHHHHHHCCCceeeeeeeecCCcHHHHHHHHhcCCccceEEEEe
Q 028523          155 LYPKFLEMMIPRIKEGKIVYVEDKAEGLESAPAALVGLFSGRNVGKQVVEV  205 (208)
Q Consensus       155 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~  205 (208)
                      ...+.++++.+++.+|.+++.+..+++++++.+|++.+.+++..||+|+++
T Consensus       295 ~~~~~~~~~~~l~~~g~i~~~~~~~~~l~~~~~A~~~~~~~~~~gkvvl~~  345 (345)
T cd08293         295 KFEEAIAQLSQWVKEGKLKVKETVYEGLENAGEAFQSMMNGGNIGKQIVKV  345 (345)
T ss_pred             HHHHHHHHHHHHHHCCCccceeEEeecHHHHHHHHHHHhcCCCCCeEEEEC
Confidence            335668889999999999987666779999999999999999899999875

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acid

>cd08281 liver_ADH_like1 Zinc-dependent alcohol dehydrogenases (ADH) and class III ADG (AKA formaldehyde dehydrogenase)

Probab=99.96  E-value=1.6e-27  Score=187.20  Aligned_cols=193  Identities=16%  Similarity=0.190  Sum_probs=163.2

Q ss_pred             chhhHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHH
Q 028523            2 PGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGC-YVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAA   80 (208)
Q Consensus         2 ~~~tA~~~l~~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g~-~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~   80 (208)
                      +++|||+++.+.+++++|++|+|+|+ |++|++++|+|+..|+ +|+++++++++.+.++ ++|++.++++.+. ++.++
T Consensus       175 ~~~ta~~~~~~~~~i~~g~~VlV~G~-G~vG~~a~~lak~~G~~~Vi~~~~~~~r~~~a~-~~Ga~~~i~~~~~-~~~~~  251 (371)
T cd08281         175 AVLTGVGAVVNTAGVRPGQSVAVVGL-GGVGLSALLGAVAAGASQVVAVDLNEDKLALAR-ELGATATVNAGDP-NAVEQ  251 (371)
T ss_pred             hHHHHHHHHHhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCcEEEEcCCHHHHHHHH-HcCCceEeCCCch-hHHHH
Confidence            46789999888889999999999985 9999999999999999 7999999999999998 9999999998876 78888


Q ss_pred             HHhHCCCCccEEEeCCCc-hhHHHHHHhhccCCEEEEEecccccCCCCCCCccchHHHhhcceeEEEeeccccccchHHH
Q 028523           81 LKRYFPEGINIYFENVGG-KMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCLISKRIRMEGFLVPDYFHLYPKF  159 (208)
Q Consensus        81 ~~~~~~~~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (208)
                      +++.+++++|++|||+|. ..+..++++++++|+++.+|...+.    ....++...++.+++++.|+....+..  .+.
T Consensus       252 i~~~~~~g~d~vid~~G~~~~~~~~~~~l~~~G~iv~~G~~~~~----~~~~~~~~~~~~~~~~i~g~~~~~~~~--~~~  325 (371)
T cd08281         252 VRELTGGGVDYAFEMAGSVPALETAYEITRRGGTTVTAGLPDPE----ARLSVPALSLVAEERTLKGSYMGSCVP--RRD  325 (371)
T ss_pred             HHHHhCCCCCEEEECCCChHHHHHHHHHHhcCCEEEEEccCCCC----ceeeecHHHHhhcCCEEEEEecCCCCh--HHH
Confidence            888776689999999995 6889999999999999999875421    122345566788999999987655421  456


Q ss_pred             HHHHHHHHHCCCcee--eeeeeecCCcHHHHHHHHhcCCccceEEE
Q 028523          160 LEMMIPRIKEGKIVY--VEDKAEGLESAPAALVGLFSGRNVGKQVV  203 (208)
Q Consensus       160 ~~~~~~~~~~g~~~~--~~~~~~~~~~~~~a~~~~~~~~~~gk~vv  203 (208)
                      ++++++++.+|++++  .++++|+++++++|++.+.+++..+|+|+
T Consensus       326 ~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~~~~vi~  371 (371)
T cd08281         326 IPRYLALYLSGRLPVDKLLTHRLPLDEINEGFDRLAAGEAVRQVIL  371 (371)
T ss_pred             HHHHHHHHHcCCCCchhheeeeecHHHHHHHHHHHhCCCceeeeeC
Confidence            788999999999975  47889999999999999999998888764

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group contains members identified as zinc dependent alcohol dehydrogenases (ADH), and class III ADG (aka formaldehyde dehydrogenase, FDH). Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also know as glutathione-dependent formaldehyde dehyd

>cd08291 ETR_like_1 2-enoyl thioester reductase (ETR) like proteins, child 1

Probab=99.96  E-value=1.1e-26  Score=179.37  Aligned_cols=194  Identities=24%  Similarity=0.339  Sum_probs=159.9

Q ss_pred             chhhHHHHHHHhcCCCCCCEEEEe-cCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHH
Q 028523            2 PGMTAYAGFFEVCSPKQGEYVFVS-AASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAA   80 (208)
Q Consensus         2 ~~~tA~~~l~~~~~~~~g~~vli~-ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~   80 (208)
                      +++|||.++ ..+.+ .++.++|+ ||+|++|++++|+|+.+|++|+++++++++.+.++ ++|++.++++++. ++.+.
T Consensus       128 ~~~ta~~~~-~~~~~-~~~~vlv~~~g~g~vG~~a~q~a~~~G~~vi~~~~~~~~~~~~~-~~g~~~~i~~~~~-~~~~~  203 (324)
T cd08291         128 NPLTALGML-ETARE-EGAKAVVHTAAASALGRMLVRLCKADGIKVINIVRRKEQVDLLK-KIGAEYVLNSSDP-DFLED  203 (324)
T ss_pred             cHHHHHHHH-Hhhcc-CCCcEEEEccCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-HcCCcEEEECCCc-cHHHH
Confidence            467887554 55555 45556665 78999999999999999999999999999999999 8999999998876 88888


Q ss_pred             HHhHCCC-CccEEEeCCCchhHHHHHHhhccCCEEEEEecccccCCCCCCCccchHHHhhcceeEEEeecccc-ccchHH
Q 028523           81 LKRYFPE-GINIYFENVGGKMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCLISKRIRMEGFLVPDY-FHLYPK  158 (208)
Q Consensus        81 ~~~~~~~-~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~  158 (208)
                      +++.+++ ++|++||++|+......+++++++|+++.+|...+.    .....+....+.+++++.++....+ .....+
T Consensus       204 v~~~~~~~~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  279 (324)
T cd08291         204 LKELIAKLNATIFFDAVGGGLTGQILLAMPYGSTLYVYGYLSGK----LDEPIDPVDLIFKNKSIEGFWLTTWLQKLGPE  279 (324)
T ss_pred             HHHHhCCCCCcEEEECCCcHHHHHHHHhhCCCCEEEEEEecCCC----CcccCCHHHHhhcCcEEEEEEHHHhhcccCHH
Confidence            8888776 899999999988888899999999999999975431    1112334566788999998887654 222356


Q ss_pred             HHHHHHHHHHCCCceeeeeeeecCCcHHHHHHHHhcCCccceEEEE
Q 028523          159 FLEMMIPRIKEGKIVYVEDKAEGLESAPAALVGLFSGRNVGKQVVE  204 (208)
Q Consensus       159 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~  204 (208)
                      .++++++++. |.+++.++++|+++++.+|++.+.+++..||++|.
T Consensus       280 ~~~~~~~~~~-~~~~~~i~~~~~l~~~~~a~~~~~~~~~~Gkvv~~  324 (324)
T cd08291         280 VVKKLKKLVK-TELKTTFASRYPLALTLEAIAFYSKNMSTGKKLLI  324 (324)
T ss_pred             HHHHHHHHHh-CccccceeeEEcHHHHHHHHHHHHhCCCCCeEEeC
Confidence            7888899988 99999999999999999999999999989999873

2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordin

>PRK09880 L-idonate 5-dehydrogenase; Provisional

Probab=99.96  E-value=9.1e-27  Score=181.15  Aligned_cols=186  Identities=22%  Similarity=0.240  Sum_probs=153.3

Q ss_pred             chhhHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHH
Q 028523            2 PGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGC-YVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAA   80 (208)
Q Consensus         2 ~~~tA~~~l~~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g~-~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~   80 (208)
                      +++|||+++.+ ....+|++|+|+|+ |++|++++|+++.+|+ +|+++++++++.+.++ ++|++.++++++. ++.+.
T Consensus       154 ~~~~a~~al~~-~~~~~g~~VlV~G~-G~vG~~aiqlak~~G~~~Vi~~~~~~~~~~~a~-~lGa~~vi~~~~~-~~~~~  229 (343)
T PRK09880        154 PLAVAIHAAHQ-AGDLQGKRVFVSGV-GPIGCLIVAAVKTLGAAEIVCADVSPRSLSLAR-EMGADKLVNPQND-DLDHY  229 (343)
T ss_pred             HHHHHHHHHHh-cCCCCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEeCCHHHHHHHH-HcCCcEEecCCcc-cHHHH
Confidence            46789999955 45668999999985 9999999999999999 7999999999999999 8999999998875 55432


Q ss_pred             HHhHCCCCccEEEeCCCc-hhHHHHHHhhccCCEEEEEecccccCCCCCCCccchHHHhhcceeEEEeeccccccchHHH
Q 028523           81 LKRYFPEGINIYFENVGG-KMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCLISKRIRMEGFLVPDYFHLYPKF  159 (208)
Q Consensus        81 ~~~~~~~~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (208)
                      . +. .+++|++|||+|+ ..+..++++++++|+++.+|....      ...++....+.+++++.++...      .+.
T Consensus       230 ~-~~-~g~~D~vid~~G~~~~~~~~~~~l~~~G~iv~~G~~~~------~~~~~~~~~~~k~~~i~g~~~~------~~~  295 (343)
T PRK09880        230 K-AE-KGYFDVSFEVSGHPSSINTCLEVTRAKGVMVQVGMGGA------PPEFPMMTLIVKEISLKGSFRF------TEE  295 (343)
T ss_pred             h-cc-CCCCCEEEECCCCHHHHHHHHHHhhcCCEEEEEccCCC------CCccCHHHHHhCCcEEEEEeec------ccc
Confidence            2 21 2369999999996 578999999999999999997432      1234556677889998887642      345


Q ss_pred             HHHHHHHHHCCCcee--eeeeeecCCcHHHHHHHHhcCCccceEEEEe
Q 028523          160 LEMMIPRIKEGKIVY--VEDKAEGLESAPAALVGLFSGRNVGKQVVEV  205 (208)
Q Consensus       160 ~~~~~~~~~~g~~~~--~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~  205 (208)
                      ++++++++++|.+++  .++++|+++++++|++.+.++...||++|.+
T Consensus       296 ~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~~gKvvl~~  343 (343)
T PRK09880        296 FNTAVSWLANGVINPLPLLSAEYPFTDLEEALIFAGDKTQAAKVQLVF  343 (343)
T ss_pred             HHHHHHHHHcCCCCchhheEEEEEHHHHHHHHHHHhcCCCceEEEEeC
Confidence            788999999999986  5778999999999999999988789999864

>cd08239 THR_DH_like L-threonine dehydrogenase (TDH)-like

Probab=99.95  E-value=1.6e-26  Score=179.52  Aligned_cols=187  Identities=24%  Similarity=0.241  Sum_probs=155.9

Q ss_pred             chhhHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCE-EEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHH
Q 028523            2 PGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCY-VVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAA   80 (208)
Q Consensus         2 ~~~tA~~~l~~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g~~-v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~   80 (208)
                      +++|||+++. .+.+++|++|+|+|+ |++|++++|+++.+|++ |+++++++++.+.++ ++|++.++++++. + .+.
T Consensus       148 ~~~ta~~~l~-~~~~~~g~~vlV~G~-G~vG~~~~~~ak~~G~~~vi~~~~~~~~~~~~~-~~ga~~~i~~~~~-~-~~~  222 (339)
T cd08239         148 GIGTAYHALR-RVGVSGRDTVLVVGA-GPVGLGALMLARALGAEDVIGVDPSPERLELAK-ALGADFVINSGQD-D-VQE  222 (339)
T ss_pred             hHHHHHHHHH-hcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHH-HhCCCEEEcCCcc-h-HHH
Confidence            5679999994 577899999999985 99999999999999997 999999999999998 9999999998876 5 666


Q ss_pred             HHhHCCC-CccEEEeCCCch-hHHHHHHhhccCCEEEEEecccccCCCCCCCccchHHHhhcceeEEEeeccccccchHH
Q 028523           81 LKRYFPE-GINIYFENVGGK-MLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCLISKRIRMEGFLVPDYFHLYPK  158 (208)
Q Consensus        81 ~~~~~~~-~~d~v~d~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  158 (208)
                      +.+.+++ ++|++|||+|+. .+..++++|+++|+++.+|.....     .. .....++.+++++.++....     .+
T Consensus       223 ~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-----~~-~~~~~~~~~~~~i~g~~~~~-----~~  291 (339)
T cd08239         223 IRELTSGAGADVAIECSGNTAARRLALEAVRPWGRLVLVGEGGEL-----TI-EVSNDLIRKQRTLIGSWYFS-----VP  291 (339)
T ss_pred             HHHHhCCCCCCEEEECCCCHHHHHHHHHHhhcCCEEEEEcCCCCc-----cc-CcHHHHHhCCCEEEEEecCC-----HH
Confidence            7777766 899999999975 558899999999999999975421     11 11245667889998887644     45


Q ss_pred             HHHHHHHHHHCCCcee--eeeeeecCCcHHHHHHHHhcCCccceEEEEe
Q 028523          159 FLEMMIPRIKEGKIVY--VEDKAEGLESAPAALVGLFSGRNVGKQVVEV  205 (208)
Q Consensus       159 ~~~~~~~~~~~g~~~~--~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~  205 (208)
                      .++++++++.+|.+++  .++++|+++++.+|++.+.++. .||+||++
T Consensus       292 ~~~~~~~~~~~g~i~~~~~i~~~~~l~~~~~a~~~~~~~~-~gKvvi~~  339 (339)
T cd08239         292 DMEECAEFLARHKLEVDRLVTHRFGLDQAPEAYALFAQGE-SGKVVFVF  339 (339)
T ss_pred             HHHHHHHHHHcCCCChhHeEEEEecHHHHHHHHHHHHcCC-ceEEEEeC
Confidence            6888999999999874  6788999999999999998876 69999874

MDR/AHD-like proteins, including a protein annotated as a threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)-dependent oxidation. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Zinc-dependent ADHs are medium chain dehydrogenase/reductase type proteins (MDRs) and have a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. In addition to alcohol dehydrogenases, this group includes quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc at

>TIGR03451 mycoS_dep_FDH mycothiol-dependent formaldehyde dehydrogenase

Probab=99.95  E-value=2.1e-26  Score=180.13  Aligned_cols=193  Identities=18%  Similarity=0.241  Sum_probs=160.3

Q ss_pred             chhhHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHH
Q 028523            2 PGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGC-YVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAA   80 (208)
Q Consensus         2 ~~~tA~~~l~~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g~-~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~   80 (208)
                      +++|||+++.+.+++++|++|||+|+ |++|++++|+|+..|+ +|+++++++++.+.++ ++|++.++++++. ++.+.
T Consensus       160 ~~~ta~~~~~~~~~~~~g~~VlV~G~-g~vG~~a~~~ak~~G~~~Vi~~~~~~~~~~~~~-~~Ga~~~i~~~~~-~~~~~  236 (358)
T TIGR03451       160 GVMAGLGAAVNTGGVKRGDSVAVIGC-GGVGDAAIAGAALAGASKIIAVDIDDRKLEWAR-EFGATHTVNSSGT-DPVEA  236 (358)
T ss_pred             cchhhHHHHHhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHH-HcCCceEEcCCCc-CHHHH
Confidence            46788988878889999999999985 9999999999999999 5999999999999998 9999999998876 78888


Q ss_pred             HHhHCCC-CccEEEeCCCc-hhHHHHHHhhccCCEEEEEecccccCCCCCCCccchHHHhhcceeEEEeeccccccchHH
Q 028523           81 LKRYFPE-GINIYFENVGG-KMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCLISKRIRMEGFLVPDYFHLYPK  158 (208)
Q Consensus        81 ~~~~~~~-~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  158 (208)
                      +++.+++ ++|++|||+|+ ..+..++++++++|+++.+|.....    .....+...++.+++++.+++.....  ..+
T Consensus       237 i~~~~~~~g~d~vid~~g~~~~~~~~~~~~~~~G~iv~~G~~~~~----~~~~~~~~~~~~~~~~i~~~~~~~~~--~~~  310 (358)
T TIGR03451       237 IRALTGGFGADVVIDAVGRPETYKQAFYARDLAGTVVLVGVPTPD----MTLELPLLDVFGRGGALKSSWYGDCL--PER  310 (358)
T ss_pred             HHHHhCCCCCCEEEECCCCHHHHHHHHHHhccCCEEEEECCCCCC----ceeeccHHHHhhcCCEEEEeecCCCC--cHH
Confidence            8888876 89999999995 6889999999999999999975421    11234455677788888887653221  145


Q ss_pred             HHHHHHHHHHCCCcee--eeeeeecCCcHHHHHHHHhcCCccceEEEE
Q 028523          159 FLEMMIPRIKEGKIVY--VEDKAEGLESAPAALVGLFSGRNVGKQVVE  204 (208)
Q Consensus       159 ~~~~~~~~~~~g~~~~--~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~  204 (208)
                      .++++++++++|.+++  .++++|+++++.+|++.+++++.. |++|.
T Consensus       311 ~~~~~~~l~~~g~l~~~~~i~~~~~l~~~~~A~~~~~~~~~~-k~~~~  357 (358)
T TIGR03451       311 DFPMLVDLYLQGRLPLDAFVTERIGLDDVEEAFDKMHAGDVL-RSVVE  357 (358)
T ss_pred             HHHHHHHHHHcCCCCchheEEEEecHHHHHHHHHHHhCCCcc-eeEEe
Confidence            6888999999999975  478899999999999999988765 77765

Members of this protein family are mycothiol-dependent formaldehyde dehydrogenase (EC 1.2.1.66). This protein is found, so far, only in the Actinobacteria (Mycobacterium sp., Streptomyces sp., Corynebacterium sp., and related species), where mycothione replaces glutathione.

>COG1062 AdhC Zn-dependent alcohol dehydrogenases, class III [Energy production and conversion]

Probab=99.95  E-value=6.4e-27  Score=173.50  Aligned_cols=192  Identities=21%  Similarity=0.217  Sum_probs=165.1

Q ss_pred             hhhHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHHH
Q 028523            3 GMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGC-YVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAAL   81 (208)
Q Consensus         3 ~~tA~~~l~~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g~-~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~~   81 (208)
                      .+|.+.+..+.+++++|++|.|+| .|++|++++|-|+..|+ ++++++.+++++++++ +||+++++|.++..++.+.+
T Consensus       170 V~TG~Gav~nta~v~~G~tvaV~G-lGgVGlaaI~gA~~agA~~IiAvD~~~~Kl~~A~-~fGAT~~vn~~~~~~vv~~i  247 (366)
T COG1062         170 VTTGIGAVVNTAKVEPGDTVAVFG-LGGVGLAAIQGAKAAGAGRIIAVDINPEKLELAK-KFGATHFVNPKEVDDVVEAI  247 (366)
T ss_pred             eccChHHhhhcccCCCCCeEEEEe-ccHhHHHHHHHHHHcCCceEEEEeCCHHHHHHHH-hcCCceeecchhhhhHHHHH
Confidence            568889888999999999999999 59999999999999999 9999999999999999 99999999998763589999


Q ss_pred             HhHCCCCccEEEeCCCc-hhHHHHHHhhccCCEEEEEecccccCCCCCCCccchHHHhhcceeEEEeeccccccchHHHH
Q 028523           82 KRYFPEGINIYFENVGG-KMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCLISKRIRMEGFLVPDYFHLYPKFL  160 (208)
Q Consensus        82 ~~~~~~~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (208)
                      .+++++|+|++|||+|. ..++.+++++.++|+.+.+|....    ....+.+...+... .++.|+..+...  -+..+
T Consensus       248 ~~~T~gG~d~~~e~~G~~~~~~~al~~~~~~G~~v~iGv~~~----~~~i~~~~~~lv~g-r~~~Gs~~G~~~--p~~di  320 (366)
T COG1062         248 VELTDGGADYAFECVGNVEVMRQALEATHRGGTSVIIGVAGA----GQEISTRPFQLVTG-RVWKGSAFGGAR--PRSDI  320 (366)
T ss_pred             HHhcCCCCCEEEEccCCHHHHHHHHHHHhcCCeEEEEecCCC----CceeecChHHeecc-ceEEEEeecCCc--cccch
Confidence            99999899999999995 799999999999999999998652    23334555555555 788888877642  15568


Q ss_pred             HHHHHHHHCCCcee--eeeeeecCCcHHHHHHHHhcCCccceEEEE
Q 028523          161 EMMIPRIKEGKIVY--VEDKAEGLESAPAALVGLFSGRNVGKQVVE  204 (208)
Q Consensus       161 ~~~~~~~~~g~~~~--~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~  204 (208)
                      .++++++.+|++..  .++++++|++++|||+.|.+|+.+ |-||.
T Consensus       321 P~lv~~y~~Gkl~~d~lvt~~~~Le~INeaf~~m~~G~~I-R~Vi~  365 (366)
T COG1062         321 PRLVDLYMAGKLPLDRLVTHTIPLEDINEAFDLMHEGKSI-RSVIR  365 (366)
T ss_pred             hHHHHHHHcCCCchhHHhhccccHHHHHHHHHHHhCCcee-eEEec
Confidence            99999999999874  578899999999999999999986 44443

>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]

Probab=99.95  E-value=2.1e-27  Score=197.26  Aligned_cols=200  Identities=20%  Similarity=0.279  Sum_probs=172.5

Q ss_pred             chhhHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCC---CeeEecCCCccHH
Q 028523            2 PGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGF---DEAFNYKEEPDLD   78 (208)
Q Consensus         2 ~~~tA~~~l~~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~---~~v~~~~~~~~~~   78 (208)
                      .|.|||++|..++..++|++|||++|+|++|++|+.+|.+.|++|+.|+.|.++++++.+.|..   ..+-|.++. ++.
T Consensus      1536 VYsTaYYALVvRG~mkkGekiLIHaGsGGVGQAAIaiALa~G~~VFTTVGSaEKRefL~~rFPqLqe~~~~NSRdt-sFE 1614 (2376)
T KOG1202|consen 1536 VYSTAYYALVVRGQMKKGEKILIHAGSGGVGQAAIAIALAHGCTVFTTVGSAEKREFLLKRFPQLQETNFANSRDT-SFE 1614 (2376)
T ss_pred             EeeeehhhhhhhccccCCcEEEEecCCCchhHHHHHHHHHcCCEEEEecCcHHHHHHHHHhchhhhhhcccccccc-cHH
Confidence            4789999999999999999999999999999999999999999999999999999999876653   346677776 888


Q ss_pred             HHHHhHCCC-CccEEEeCCCchhHHHHHHhhccCCEEEEEecccccCCCCCCCccchHHHhhcceeEEEeeccccccchH
Q 028523           79 AALKRYFPE-GINIYFENVGGKMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCLISKRIRMEGFLVPDYFHLYP  157 (208)
Q Consensus        79 ~~~~~~~~~-~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  157 (208)
                      .-+.+.+.| |+|+|++....+.++..++||+..|||..+|....     ..-+......|.+|.+++|.-+.++.+.-.
T Consensus      1615 q~vl~~T~GrGVdlVLNSLaeEkLQASiRCLa~~GRFLEIGKfDL-----SqNspLGMavfLkNvsfHGiLLDsvmege~ 1689 (2376)
T KOG1202|consen 1615 QHVLWHTKGRGVDLVLNSLAEEKLQASIRCLALHGRFLEIGKFDL-----SQNSPLGMAVFLKNVSFHGILLDSVMEGEE 1689 (2376)
T ss_pred             HHHHHHhcCCCeeeehhhhhHHHHHHHHHHHHhcCeeeeecceec-----ccCCcchhhhhhcccceeeeehhhhhcCcH
Confidence            889998988 99999999999999999999999999999997543     222345678899999999999988855444


Q ss_pred             HHHHHHHHHH----HCCCceeeeeeeecCCcHHHHHHHHhcCCccceEEEEecC
Q 028523          158 KFLEMMIPRI----KEGKIVYVEDKAEGLESAPAALVGLFSGRNVGKQVVEVAT  207 (208)
Q Consensus       158 ~~~~~~~~~~----~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~~~  207 (208)
                      +.+.++..++    .+|.++|..+++|+-+++++||+.|.+|+.+||+|+++-.
T Consensus      1690 e~~~ev~~Lv~eGIksGvV~PL~ttvF~~~qvE~AFRfMasGKHIGKVvikvr~ 1743 (2376)
T KOG1202|consen 1690 EMWREVAALVAEGIKSGVVRPLPTTVFHGQQVEDAFRFMASGKHIGKVVIKVRA 1743 (2376)
T ss_pred             HHHHHHHHHHHhhhccCceeccccccccHHHHHHHHHHHhccCccceEEEEEcc
Confidence            5555555555    5568889999999999999999999999999999998854

>PLN02827 Alcohol dehydrogenase-like

Probab=99.95  E-value=1e-25  Score=177.21  Aligned_cols=195  Identities=19%  Similarity=0.225  Sum_probs=158.4

Q ss_pred             chhhHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHhcCCCeeEecCCC-ccHHH
Q 028523            2 PGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGC-YVVGSAGSKDKVDLLKNKFGFDEAFNYKEE-PDLDA   79 (208)
Q Consensus         2 ~~~tA~~~l~~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g~-~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~-~~~~~   79 (208)
                      +++|+|+++.+.+++++|++|||+|+ |++|++++|+|+.+|+ .|+++++++++.+.++ ++|++.++++++. +++.+
T Consensus       177 ~~~~a~~~~~~~~~~~~g~~VlV~G~-G~vG~~~iqlak~~G~~~vi~~~~~~~~~~~a~-~lGa~~~i~~~~~~~~~~~  254 (378)
T PLN02827        177 GVAAGLGAAWNVADVSKGSSVVIFGL-GTVGLSVAQGAKLRGASQIIGVDINPEKAEKAK-TFGVTDFINPNDLSEPIQQ  254 (378)
T ss_pred             hhHhhHHHHHhhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHH-HcCCcEEEcccccchHHHH
Confidence            34677887767788999999999985 9999999999999999 5778888999999998 9999999988752 25677


Q ss_pred             HHHhHCCCCccEEEeCCCc-hhHHHHHHhhccC-CEEEEEecccccCCCCCCCccchHHHhhcceeEEEeeccccccchH
Q 028523           80 ALKRYFPEGINIYFENVGG-KMLDAVLLNMRIQ-GRITLCGMISQYNNDKPEGVHNLTCLISKRIRMEGFLVPDYFHLYP  157 (208)
Q Consensus        80 ~~~~~~~~~~d~v~d~~g~-~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  157 (208)
                      .+++.+++++|++||++|. ..+..+++.++++ |+++.+|....     .........++.+++++.|+....+..  .
T Consensus       255 ~v~~~~~~g~d~vid~~G~~~~~~~~l~~l~~g~G~iv~~G~~~~-----~~~~~~~~~~~~~~~~i~g~~~~~~~~--~  327 (378)
T PLN02827        255 VIKRMTGGGADYSFECVGDTGIATTALQSCSDGWGLTVTLGVPKA-----KPEVSAHYGLFLSGRTLKGSLFGGWKP--K  327 (378)
T ss_pred             HHHHHhCCCCCEEEECCCChHHHHHHHHhhccCCCEEEEECCcCC-----CccccccHHHHhcCceEEeeecCCCch--h
Confidence            7777776689999999996 5789999999998 99999997542     111111235677899999887654321  3


Q ss_pred             HHHHHHHHHHHCCCcee--eeeeeecCCcHHHHHHHHhcCCccceEEEEec
Q 028523          158 KFLEMMIPRIKEGKIVY--VEDKAEGLESAPAALVGLFSGRNVGKQVVEVA  206 (208)
Q Consensus       158 ~~~~~~~~~~~~g~~~~--~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~~  206 (208)
                      ..+.++++++++|++++  .++++|+++++.+|++.+++++. .|+||.+.
T Consensus       328 ~~~~~~~~~~~~g~i~~~~~i~~~~~le~~~~A~~~~~~~~~-~k~vi~~~  377 (378)
T PLN02827        328 SDLPSLVDKYMNKEIMIDEFITHNLSFDEINKAFELMREGKC-LRCVIHMP  377 (378)
T ss_pred             hhHHHHHHHHHcCCCChHHheEEEecHHHHHHHHHHHHCCCc-eEEEEEec
Confidence            45788999999999998  68899999999999999998887 69999874

>TIGR03201 dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase

Probab=99.95  E-value=1.1e-25  Score=175.43  Aligned_cols=190  Identities=21%  Similarity=0.276  Sum_probs=155.0

Q ss_pred             chhhHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeEecCCC--ccHHH
Q 028523            2 PGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEE--PDLDA   79 (208)
Q Consensus         2 ~~~tA~~~l~~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~--~~~~~   79 (208)
                      ++.|||+++.. ..+++|++|+|+|+ |++|++++|+|+..|++|+++++++++.+.++ ++|++.++++.+.  +++.+
T Consensus       151 ~~~ta~~a~~~-~~~~~g~~VlV~G~-G~vG~~a~~~a~~~G~~vi~~~~~~~~~~~~~-~~Ga~~~i~~~~~~~~~~~~  227 (349)
T TIGR03201       151 AVTTPYQAAVQ-AGLKKGDLVIVIGA-GGVGGYMVQTAKAMGAAVVAIDIDPEKLEMMK-GFGADLTLNPKDKSAREVKK  227 (349)
T ss_pred             hHHHHHHHHHh-cCCCCCCEEEEECC-CHHHHHHHHHHHHcCCeEEEEcCCHHHHHHHH-HhCCceEecCccccHHHHHH
Confidence            46789999854 78999999999998 99999999999999999999999999999998 8999988887664  14566


Q ss_pred             HHHhHCCC-Ccc----EEEeCCCc-hhHHHHHHhhccCCEEEEEecccccCCCCCCCccchHHHhhcceeEEEeeccccc
Q 028523           80 ALKRYFPE-GIN----IYFENVGG-KMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCLISKRIRMEGFLVPDYF  153 (208)
Q Consensus        80 ~~~~~~~~-~~d----~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  153 (208)
                      .+++.+++ ++|    ++|||+|+ ..+..++++++++|+++.+|....      ....+...++.++.++.+.+...  
T Consensus       228 ~~~~~t~~~g~d~~~d~v~d~~g~~~~~~~~~~~l~~~G~iv~~G~~~~------~~~~~~~~~~~~~~~~~g~~~~~--  299 (349)
T TIGR03201       228 LIKAFAKARGLRSTGWKIFECSGSKPGQESALSLLSHGGTLVVVGYTMA------KTEYRLSNLMAFHARALGNWGCP--  299 (349)
T ss_pred             HHHhhcccCCCCCCcCEEEECCCChHHHHHHHHHHhcCCeEEEECcCCC------CcccCHHHHhhcccEEEEEecCC--
Confidence            67777776 776    89999996 567789999999999999998642      12234455666677777766433  


Q ss_pred             cchHHHHHHHHHHHHCCCceee-eeeeecCCcHHHHHHHHhcCCccceEEEEe
Q 028523          154 HLYPKFLEMMIPRIKEGKIVYV-EDKAEGLESAPAALVGLFSGRNVGKQVVEV  205 (208)
Q Consensus       154 ~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~  205 (208)
                         .+.++++++++++|.+.+. +.++|+|+++++|++.+.+++..+|+++++
T Consensus       300 ---~~~~~~~~~~i~~g~i~~~~~i~~~~l~~~~~A~~~~~~~~~~~k~~~~~  349 (349)
T TIGR03201       300 ---PDRYPAALDLVLDGKIQLGPFVERRPLDQIEHVFAAAHHHKLKRRAILTP  349 (349)
T ss_pred             ---HHHHHHHHHHHHcCCCCcccceEEecHHHHHHHHHHHHcCCccceEEecC
Confidence               4568899999999999753 334799999999999999999889999863

Members of this protein family are 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase, an enzyme in the anaerobic metabolism of aromatic enzymes by way of benzoyl-CoA, as seen in Thauera aromatica, Geobacter metallireducens, and Azoarcus sp. The experimentally characterized form from T. aromatica uses only NAD+, not NADP+. Note that Rhodopseudomonas palustris uses a different pathway to perform a similar degradation of benzoyl-CoA to 3-hydroxpimelyl-CoA.

>KOG0023 consensus Alcohol dehydrogenase, class V [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.95  E-value=7.1e-26  Score=166.34  Aligned_cols=191  Identities=21%  Similarity=0.263  Sum_probs=164.2

Q ss_pred             chhhHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHHH
Q 028523            2 PGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAAL   81 (208)
Q Consensus         2 ~~~tA~~~l~~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~~   81 (208)
                      ++.|.|.+| +..++.+|+++.|.|+ |++|.+++|+||++|.+|++++++.++.+.+.+.||++..++..+.+++.+.+
T Consensus       166 aGITvYspL-k~~g~~pG~~vgI~Gl-GGLGh~aVq~AKAMG~rV~vis~~~~kkeea~~~LGAd~fv~~~~d~d~~~~~  243 (360)
T KOG0023|consen  166 AGITVYSPL-KRSGLGPGKWVGIVGL-GGLGHMAVQYAKAMGMRVTVISTSSKKKEEAIKSLGADVFVDSTEDPDIMKAI  243 (360)
T ss_pred             cceEEeehh-HHcCCCCCcEEEEecC-cccchHHHHHHHHhCcEEEEEeCCchhHHHHHHhcCcceeEEecCCHHHHHHH
Confidence            567899999 5578999999999997 66999999999999999999999986655555489999888887444888888


Q ss_pred             HhHCCCCccEEEeCCCchhHHHHHHhhccCCEEEEEecccccCCCCCCCccchHHHhhcceeEEEeeccccccchHHHHH
Q 028523           82 KRYFPEGINIYFENVGGKMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCLISKRIRMEGFLVPDYFHLYPKFLE  161 (208)
Q Consensus        82 ~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  161 (208)
                      ...+++++|-+.+. ....++.++.+|+++|++|++|.+..      ...++..++..+.+++.|+.+++     +...+
T Consensus       244 ~~~~dg~~~~v~~~-a~~~~~~~~~~lk~~Gt~V~vg~p~~------~~~~~~~~lil~~~~I~GS~vG~-----~ket~  311 (360)
T KOG0023|consen  244 MKTTDGGIDTVSNL-AEHALEPLLGLLKVNGTLVLVGLPEK------PLKLDTFPLILGRKSIKGSIVGS-----RKETQ  311 (360)
T ss_pred             HHhhcCcceeeeec-cccchHHHHHHhhcCCEEEEEeCcCC------cccccchhhhcccEEEEeecccc-----HHHHH
Confidence            88877777777766 44688999999999999999999762      44566778888999999999988     77789


Q ss_pred             HHHHHHHCCCceeeeeeeecCCcHHHHHHHHhcCCccceEEEEecC
Q 028523          162 MMIPRIKEGKIVYVEDKAEGLESAPAALVGLFSGRNVGKQVVEVAT  207 (208)
Q Consensus       162 ~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~~~  207 (208)
                      +++++.++|.+++.+. ..+++++++|+++|+++...+|.||++..
T Consensus       312 E~Ldf~a~~~ik~~IE-~v~~~~v~~a~erm~kgdV~yRfVvD~s~  356 (360)
T KOG0023|consen  312 EALDFVARGLIKSPIE-LVKLSEVNEAYERMEKGDVRYRFVVDVSK  356 (360)
T ss_pred             HHHHHHHcCCCcCceE-EEehhHHHHHHHHHHhcCeeEEEEEEccc
Confidence            9999999999998886 68999999999999999999999998764

>PRK10309 galactitol-1-phosphate dehydrogenase; Provisional

Probab=99.95  E-value=1.5e-25  Score=174.67  Aligned_cols=195  Identities=17%  Similarity=0.204  Sum_probs=154.9

Q ss_pred             hhhHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCE-EEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHHH
Q 028523            3 GMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCY-VVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAAL   81 (208)
Q Consensus         3 ~~tA~~~l~~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g~~-v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~~   81 (208)
                      .+++|+++ +.+.+++|++|+|+| +|++|++++|+|+.+|++ |+++++++++.+.++ ++|++.++++++. + .+.+
T Consensus       146 ~~~~~~~~-~~~~~~~g~~vlV~G-~g~vG~~~~~~a~~~G~~~v~~~~~~~~~~~~~~-~~Ga~~~i~~~~~-~-~~~~  220 (347)
T PRK10309        146 ITVGLHAF-HLAQGCEGKNVIIIG-AGTIGLLAIQCAVALGAKSVTAIDINSEKLALAK-SLGAMQTFNSREM-S-APQI  220 (347)
T ss_pred             HHHHHHHH-HhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHH-HcCCceEecCccc-C-HHHH
Confidence            34567776 567889999999997 599999999999999996 788888999999988 8999999988765 5 4556


Q ss_pred             HhHCCC-Ccc-EEEeCCCc-hhHHHHHHhhccCCEEEEEecccccCCCCCCCccchHHHhhcceeEEEeeccccccchHH
Q 028523           82 KRYFPE-GIN-IYFENVGG-KMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCLISKRIRMEGFLVPDYFHLYPK  158 (208)
Q Consensus        82 ~~~~~~-~~d-~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  158 (208)
                      .+.+.+ ++| ++|||+|+ ..+..++++++++|+++.+|...+. .  .........++.+++++.|+..........+
T Consensus       221 ~~~~~~~~~d~~v~d~~G~~~~~~~~~~~l~~~G~iv~~G~~~~~-~--~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~  297 (347)
T PRK10309        221 QSVLRELRFDQLILETAGVPQTVELAIEIAGPRAQLALVGTLHHD-L--HLTSATFGKILRKELTVIGSWMNYSSPWPGQ  297 (347)
T ss_pred             HHHhcCCCCCeEEEECCCCHHHHHHHHHHhhcCCEEEEEccCCCC-c--ccChhhhhHHhhcCcEEEEEeccccCCcchh
Confidence            666665 888 99999996 5889999999999999999976421 0  1111122356678899998765422111245


Q ss_pred             HHHHHHHHHHCCCce--eeeeeeecCCcHHHHHHHHhcCCccceEEEEe
Q 028523          159 FLEMMIPRIKEGKIV--YVEDKAEGLESAPAALVGLFSGRNVGKQVVEV  205 (208)
Q Consensus       159 ~~~~~~~~~~~g~~~--~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~  205 (208)
                      .++++++++.+|.++  +.++++|+|+++.+|++.+.++...||+|+++
T Consensus       298 ~~~~~~~~~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~~gKvvv~~  346 (347)
T PRK10309        298 EWETASRLLTERKLSLEPLIAHRGSFESFAQAVRDLAGNPMPGKVLLQI  346 (347)
T ss_pred             HHHHHHHHHHcCCCCchhheEEEeeHHHHHHHHHHHhcCCcceEEEEeC
Confidence            688899999999985  56889999999999999999998889999976

>KOG0024 consensus Sorbitol dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.94  E-value=1.8e-25  Score=164.60  Aligned_cols=192  Identities=22%  Similarity=0.248  Sum_probs=160.3

Q ss_pred             chhhHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHhcCCCeeEecCCCc---cH
Q 028523            2 PGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGC-YVVGSAGSKDKVDLLKNKFGFDEAFNYKEEP---DL   77 (208)
Q Consensus         2 ~~~tA~~~l~~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g~-~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~---~~   77 (208)
                      +.+++|||. +++.++.|++|||+|| |++|+.+...||.+|+ +|++++..+.+++.++ +||++.+.+.....   .+
T Consensus       154 PLsV~~HAc-r~~~vk~Gs~vLV~GA-GPIGl~t~l~Aka~GA~~VVi~d~~~~Rle~Ak-~~Ga~~~~~~~~~~~~~~~  230 (354)
T KOG0024|consen  154 PLSVGVHAC-RRAGVKKGSKVLVLGA-GPIGLLTGLVAKAMGASDVVITDLVANRLELAK-KFGATVTDPSSHKSSPQEL  230 (354)
T ss_pred             chhhhhhhh-hhcCcccCCeEEEECC-cHHHHHHHHHHHHcCCCcEEEeecCHHHHHHHH-HhCCeEEeeccccccHHHH
Confidence            467899999 6699999999999997 9999999999999999 9999999999999999 89998877666531   34


Q ss_pred             HHHHHhHCCC-CccEEEeCCC-chhHHHHHHhhccCCEEEEEecccccCCCCCCCccchHHHhhcceeEEEeeccccccc
Q 028523           78 DAALKRYFPE-GINIYFENVG-GKMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCLISKRIRMEGFLVPDYFHL  155 (208)
Q Consensus        78 ~~~~~~~~~~-~~d~v~d~~g-~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  155 (208)
                      .+.+....+. .+|+.|||+| ...++.++..++.+|++++.|...      ....++......+++.+.|+.-..    
T Consensus       231 ~~~v~~~~g~~~~d~~~dCsG~~~~~~aai~a~r~gGt~vlvg~g~------~~~~fpi~~v~~kE~~~~g~fry~----  300 (354)
T KOG0024|consen  231 AELVEKALGKKQPDVTFDCSGAEVTIRAAIKATRSGGTVVLVGMGA------EEIQFPIIDVALKEVDLRGSFRYC----  300 (354)
T ss_pred             HHHHHhhccccCCCeEEEccCchHHHHHHHHHhccCCEEEEeccCC------CccccChhhhhhheeeeeeeeeec----
Confidence            4444544443 6999999999 578999999999999999988755      344566778888999999887532    


Q ss_pred             hHHHHHHHHHHHHCCCce--eeeeeeecCCcHHHHHHHHhcCCc-cceEEEEecC
Q 028523          156 YPKFLEMMIPRIKEGKIV--YVEDKAEGLESAPAALVGLFSGRN-VGKQVVEVAT  207 (208)
Q Consensus       156 ~~~~~~~~~~~~~~g~~~--~~~~~~~~~~~~~~a~~~~~~~~~-~gk~vv~~~~  207 (208)
                       +..++..++++++|++.  +.+++.|+++++.+|++.+.++.. .-|+++..++
T Consensus       301 -~~~y~~ai~li~sGki~~k~lIT~r~~~~~~~eAf~~~~~~~~~~iKv~i~~~~  354 (354)
T KOG0024|consen  301 -NGDYPTAIELVSSGKIDVKPLITHRYKFDDADEAFETLQHGEEGVIKVIITGPE  354 (354)
T ss_pred             -cccHHHHHHHHHcCCcCchhheecccccchHHHHHHHHHhCcCCceEEEEeCCC
Confidence             45799999999999886  568899999999999999998884 3488887653

>PLN02586 probable cinnamyl alcohol dehydrogenase

Probab=99.94  E-value=1.9e-25  Score=174.70  Aligned_cols=187  Identities=18%  Similarity=0.185  Sum_probs=149.3

Q ss_pred             chhhHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHHH
Q 028523            2 PGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAAL   81 (208)
Q Consensus         2 ~~~tA~~~l~~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~~   81 (208)
                      +++|||+++.....+++|++|+|.|+ |++|++++|+|+.+|++|++++.++++...+.+++|++.++++.+.    +.+
T Consensus       167 ~~~ta~~al~~~~~~~~g~~VlV~G~-G~vG~~avq~Ak~~Ga~vi~~~~~~~~~~~~~~~~Ga~~vi~~~~~----~~~  241 (360)
T PLN02586        167 AGITVYSPMKYYGMTEPGKHLGVAGL-GGLGHVAVKIGKAFGLKVTVISSSSNKEDEAINRLGADSFLVSTDP----EKM  241 (360)
T ss_pred             chHHHHHHHHHhcccCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCcchhhhHHHhCCCcEEEcCCCH----HHH
Confidence            46789999977677889999999875 9999999999999999998888777665444338999988876642    234


Q ss_pred             HhHCCCCccEEEeCCCc-hhHHHHHHhhccCCEEEEEecccccCCCCCCCccchHHHhhcceeEEEeeccccccchHHHH
Q 028523           82 KRYFPEGINIYFENVGG-KMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCLISKRIRMEGFLVPDYFHLYPKFL  160 (208)
Q Consensus        82 ~~~~~~~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (208)
                      ++.++ ++|++||++|. ..+..++++++++|+++.+|...+      ....+...++.++..+.++....     ...+
T Consensus       242 ~~~~~-~~D~vid~~g~~~~~~~~~~~l~~~G~iv~vG~~~~------~~~~~~~~~~~~~~~i~g~~~~~-----~~~~  309 (360)
T PLN02586        242 KAAIG-TMDYIIDTVSAVHALGPLLGLLKVNGKLITLGLPEK------PLELPIFPLVLGRKLVGGSDIGG-----IKET  309 (360)
T ss_pred             HhhcC-CCCEEEECCCCHHHHHHHHHHhcCCcEEEEeCCCCC------CCccCHHHHHhCCeEEEEcCcCC-----HHHH
Confidence            44443 69999999996 578999999999999999987532      12344555666777777766543     4568


Q ss_pred             HHHHHHHHCCCceeeeeeeecCCcHHHHHHHHhcCCccceEEEEec
Q 028523          161 EMMIPRIKEGKIVYVEDKAEGLESAPAALVGLFSGRNVGKQVVEVA  206 (208)
Q Consensus       161 ~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~~  206 (208)
                      +++++++++|++++.+ ++|+|+++++|++.+.+++..||+|+++.
T Consensus       310 ~~~~~li~~g~i~~~~-~~~~l~~~~~A~~~~~~~~~~gkvvi~~~  354 (360)
T PLN02586        310 QEMLDFCAKHNITADI-ELIRMDEINTAMERLAKSDVRYRFVIDVA  354 (360)
T ss_pred             HHHHHHHHhCCCCCcE-EEEeHHHHHHHHHHHHcCCCcEEEEEEcc
Confidence            8999999999999776 47999999999999999998899999863

>PLN02178 cinnamyl-alcohol dehydrogenase

Probab=99.94  E-value=3.8e-25  Score=173.59  Aligned_cols=186  Identities=17%  Similarity=0.200  Sum_probs=150.7

Q ss_pred             chhhHHHHHHHhcC-CCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHH-HHHHHHhcCCCeeEecCCCccHHH
Q 028523            2 PGMTAYAGFFEVCS-PKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDK-VDLLKNKFGFDEAFNYKEEPDLDA   79 (208)
Q Consensus         2 ~~~tA~~~l~~~~~-~~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~-~~~~~~~~g~~~v~~~~~~~~~~~   79 (208)
                      +++|||+++..... .++|++|+|.|+ |++|++++|+|+.+|++|++++.++++ .+.++ ++|++.++++.+.    +
T Consensus       161 ~~~ta~~al~~~~~~~~~g~~VlV~G~-G~vG~~avq~Ak~~Ga~Vi~~~~~~~~~~~~a~-~lGa~~~i~~~~~----~  234 (375)
T PLN02178        161 AGITVYSPMKYYGMTKESGKRLGVNGL-GGLGHIAVKIGKAFGLRVTVISRSSEKEREAID-RLGADSFLVTTDS----Q  234 (375)
T ss_pred             cchHHHHHHHHhCCCCCCCCEEEEEcc-cHHHHHHHHHHHHcCCeEEEEeCChHHhHHHHH-hCCCcEEEcCcCH----H
Confidence            46788999865443 368999999985 999999999999999999998877554 66777 8999998887542    3


Q ss_pred             HHHhHCCCCccEEEeCCCch-hHHHHHHhhccCCEEEEEecccccCCCCCCCccchHHHhhcceeEEEeeccccccchHH
Q 028523           80 ALKRYFPEGINIYFENVGGK-MLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCLISKRIRMEGFLVPDYFHLYPK  158 (208)
Q Consensus        80 ~~~~~~~~~~d~v~d~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  158 (208)
                      .+.+.++ ++|++|||+|.+ .+..++++++++|+++.+|...+      ....+....+.+++++.|+....     .+
T Consensus       235 ~v~~~~~-~~D~vid~~G~~~~~~~~~~~l~~~G~iv~vG~~~~------~~~~~~~~~~~~~~~i~g~~~~~-----~~  302 (375)
T PLN02178        235 KMKEAVG-TMDFIIDTVSAEHALLPLFSLLKVSGKLVALGLPEK------PLDLPIFPLVLGRKMVGGSQIGG-----MK  302 (375)
T ss_pred             HHHHhhC-CCcEEEECCCcHHHHHHHHHhhcCCCEEEEEccCCC------CCccCHHHHHhCCeEEEEeCccC-----HH
Confidence            4444443 699999999965 78999999999999999987532      12345566778899998877654     45


Q ss_pred             HHHHHHHHHHCCCceeeeeeeecCCcHHHHHHHHhcCCccceEEEEec
Q 028523          159 FLEMMIPRIKEGKIVYVEDKAEGLESAPAALVGLFSGRNVGKQVVEVA  206 (208)
Q Consensus       159 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~~  206 (208)
                      .+.++++++++|++++.+ ++|+|+++++|++.+.+++..||+|+++.
T Consensus       303 ~~~~~~~l~~~g~i~~~i-~~~~l~~~~~A~~~~~~~~~~gkvvi~~~  349 (375)
T PLN02178        303 ETQEMLEFCAKHKIVSDI-ELIKMSDINSAMDRLAKSDVRYRFVIDVA  349 (375)
T ss_pred             HHHHHHHHHHhCCCcccE-EEEeHHHHHHHHHHHHcCCCceEEEEEec
Confidence            688899999999999877 57999999999999999998899999873

>cd08292 ETR_like_2 2-enoyl thioester reductase (ETR) like proteins, child 2

Probab=99.94  E-value=3.7e-25  Score=170.80  Aligned_cols=195  Identities=19%  Similarity=0.269  Sum_probs=163.9

Q ss_pred             chhhHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHHH
Q 028523            2 PGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAAL   81 (208)
Q Consensus         2 ~~~tA~~~l~~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~~   81 (208)
                      +++|||+++ ..+++++|++|+|+|++|++|++++|+|+.+|++++++++++++.+.++ ++|++.++++++. ++...+
T Consensus       124 ~~~ta~~~~-~~~~~~~g~~vlI~g~~g~ig~~~~~~a~~~G~~v~~~~~~~~~~~~~~-~~g~~~~~~~~~~-~~~~~i  200 (324)
T cd08292         124 MPLSALMLL-DFLGVKPGQWLIQNAAGGAVGKLVAMLAAARGINVINLVRRDAGVAELR-ALGIGPVVSTEQP-GWQDKV  200 (324)
T ss_pred             cHHHHHHHH-HhhCCCCCCEEEEcccccHHHHHHHHHHHHCCCeEEEEecCHHHHHHHH-hcCCCEEEcCCCc-hHHHHH
Confidence            367889988 4588999999999999999999999999999999999999999999998 7899888888776 788888


Q ss_pred             HhHCCC-CccEEEeCCCchhHHHHHHhhccCCEEEEEecccccCCCCCCCccchHHHhhcceeEEEeecccc-----ccc
Q 028523           82 KRYFPE-GINIYFENVGGKMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCLISKRIRMEGFLVPDY-----FHL  155 (208)
Q Consensus        82 ~~~~~~-~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~  155 (208)
                      .+.+++ ++|++||++|+.....++++++++|+++.+|...+     ..........+.+++++.++....+     +..
T Consensus       201 ~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~g~~v~~g~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  275 (324)
T cd08292         201 REAAGGAPISVALDSVGGKLAGELLSLLGEGGTLVSFGSMSG-----EPMQISSGDLIFKQATVRGFWGGRWSQEMSVEY  275 (324)
T ss_pred             HHHhCCCCCcEEEECCCChhHHHHHHhhcCCcEEEEEecCCC-----CCCcCCHHHHhhCCCEEEEEEcHHhhhhcCHHH
Confidence            888877 89999999998888999999999999999987532     1122334445678999988876543     223


Q ss_pred             hHHHHHHHHHHHHCCCceeeeeeeecCCcHHHHHHHHhcCCccceEEEE
Q 028523          156 YPKFLEMMIPRIKEGKIVYVEDKAEGLESAPAALVGLFSGRNVGKQVVE  204 (208)
Q Consensus       156 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~  204 (208)
                      ..+.+..+++++.+|.+++.+.++|+++++.+|++.+.++...+|++++
T Consensus       276 ~~~~~~~~~~l~~~g~i~~~~~~~~~~~~~~~a~~~~~~~~~~~kvvv~  324 (324)
T cd08292         276 RKRMIAELLTLALKGQLLLPVEAVFDLGDAAKAAAASMRPGRAGKVLLR  324 (324)
T ss_pred             HHHHHHHHHHHHHCCCccCccccEecHHHHHHHHHHHHcCCCCceEEeC
Confidence            4567888999999999987677889999999999999988888899874

2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordina

>cd08233 butanediol_DH_like (2R,3R)-2,3-butanediol dehydrogenase

Probab=99.94  E-value=3.7e-25  Score=172.70  Aligned_cols=187  Identities=21%  Similarity=0.257  Sum_probs=159.5

Q ss_pred             chhhHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHH
Q 028523            2 PGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGC-YVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAA   80 (208)
Q Consensus         2 ~~~tA~~~l~~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g~-~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~   80 (208)
                      +++|||+++ ..+++++|++|+|+|+ |++|++++|+|+.+|+ +|+++++++++.+.++ ++|++.++++++. ++.+.
T Consensus       157 ~~~ta~~~l-~~~~~~~g~~vlI~g~-g~vG~~a~q~a~~~G~~~v~~~~~~~~~~~~~~-~~ga~~~i~~~~~-~~~~~  232 (351)
T cd08233         157 PLAVAWHAV-RRSGFKPGDTALVLGA-GPIGLLTILALKAAGASKIIVSEPSEARRELAE-ELGATIVLDPTEV-DVVAE  232 (351)
T ss_pred             HHHHHHHHH-HhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHH-HhCCCEEECCCcc-CHHHH
Confidence            467899999 7789999999999985 9999999999999999 8999998999999998 8999999998887 88888


Q ss_pred             HHhHCCC-CccEEEeCCC-chhHHHHHHhhccCCEEEEEecccccCCCCCCCccchHHHhhcceeEEEeeccccccchHH
Q 028523           81 LKRYFPE-GINIYFENVG-GKMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCLISKRIRMEGFLVPDYFHLYPK  158 (208)
Q Consensus        81 ~~~~~~~-~~d~v~d~~g-~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  158 (208)
                      +++.+++ ++|++||++| ...+..++++|+++|+++.+|....      ....+....+.+++++.+.....     .+
T Consensus       233 l~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~------~~~~~~~~~~~~~~~i~g~~~~~-----~~  301 (351)
T cd08233         233 VRKLTGGGGVDVSFDCAGVQATLDTAIDALRPRGTAVNVAIWEK------PISFNPNDLVLKEKTLTGSICYT-----RE  301 (351)
T ss_pred             HHHHhCCCCCCEEEECCCCHHHHHHHHHhccCCCEEEEEccCCC------CCccCHHHHHhhCcEEEEEeccC-----cc
Confidence            8888776 7999999998 4688999999999999999997541      12345566778889998876543     45


Q ss_pred             HHHHHHHHHHCCCcee--eeeeeecCCcH-HHHHHHHhcCCcc-ceEEE
Q 028523          159 FLEMMIPRIKEGKIVY--VEDKAEGLESA-PAALVGLFSGRNV-GKQVV  203 (208)
Q Consensus       159 ~~~~~~~~~~~g~~~~--~~~~~~~~~~~-~~a~~~~~~~~~~-gk~vv  203 (208)
                      .++++.+++++|.+++  .++++|+++++ ++|++.+.++... +|+||
T Consensus       302 ~~~~~~~~~~~g~l~~~~~i~~~~~l~e~~~~a~~~~~~~~~~~~k~v~  350 (351)
T cd08233         302 DFEEVIDLLASGKIDAEPLITSRIPLEDIVEKGFEELINDKEQHVKILV  350 (351)
T ss_pred             hHHHHHHHHHcCCCChHHheEEEecHHHHHHHHHHHHHhCCCCceEEEe
Confidence            6889999999999964  47789999996 7999999999864 89987

(2R,3R)-2,3-butanediol dehydrogenase, a zinc-dependent medium chain alcohol dehydrogenase, catalyzes the NAD(+)-dependent oxidation of (2R,3R)-2,3-butanediol and meso-butanediol to acetoin. BDH functions as a homodimer. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit.

>TIGR02822 adh_fam_2 zinc-binding alcohol dehydrogenase family protein

Probab=99.94  E-value=4e-25  Score=170.90  Aligned_cols=178  Identities=16%  Similarity=0.129  Sum_probs=147.4

Q ss_pred             chhhHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHHH
Q 028523            2 PGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAAL   81 (208)
Q Consensus         2 ~~~tA~~~l~~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~~   81 (208)
                      +++|||+++. .+++++|++|||+|+ |++|++++|+|+..|++|+++++++++.+.++ ++|++.++++.+. .     
T Consensus       150 ~~~ta~~~~~-~~~~~~g~~VlV~G~-g~iG~~a~~~a~~~G~~vi~~~~~~~~~~~a~-~~Ga~~vi~~~~~-~-----  220 (329)
T TIGR02822       150 AGIIGYRALL-RASLPPGGRLGLYGF-GGSAHLTAQVALAQGATVHVMTRGAAARRLAL-ALGAASAGGAYDT-P-----  220 (329)
T ss_pred             cchHHHHHHH-hcCCCCCCEEEEEcC-CHHHHHHHHHHHHCCCeEEEEeCChHHHHHHH-HhCCceecccccc-C-----
Confidence            4678999995 588999999999996 99999999999999999999999999999999 9999998875432 1     


Q ss_pred             HhHCCCCccEEEeCCC-chhHHHHHHhhccCCEEEEEecccccCCCCCCCccchHHHhhcceeEEEeeccccccchHHHH
Q 028523           82 KRYFPEGINIYFENVG-GKMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCLISKRIRMEGFLVPDYFHLYPKFL  160 (208)
Q Consensus        82 ~~~~~~~~d~v~d~~g-~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (208)
                          .+++|.++++.+ ++.+..++++++++|+++.+|...+     ....++....+.+++++.++....     +..+
T Consensus       221 ----~~~~d~~i~~~~~~~~~~~~~~~l~~~G~~v~~G~~~~-----~~~~~~~~~~~~~~~~i~g~~~~~-----~~~~  286 (329)
T TIGR02822       221 ----PEPLDAAILFAPAGGLVPPALEALDRGGVLAVAGIHLT-----DTPPLNYQRHLFYERQIRSVTSNT-----RADA  286 (329)
T ss_pred             ----cccceEEEECCCcHHHHHHHHHhhCCCcEEEEEeccCc-----cCCCCCHHHHhhCCcEEEEeecCC-----HHHH
Confidence                125899998887 5789999999999999999997432     111234455667888888776533     4567


Q ss_pred             HHHHHHHHCCCceeeeeeeecCCcHHHHHHHHhcCCccceEEE
Q 028523          161 EMMIPRIKEGKIVYVEDKAEGLESAPAALVGLFSGRNVGKQVV  203 (208)
Q Consensus       161 ~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv  203 (208)
                      .++++++.+|++++ ++++|+|+++++|++.+.+++..||+||
T Consensus       287 ~~~~~l~~~g~i~~-i~~~~~l~~~~~A~~~~~~~~~~Gkvvl  328 (329)
T TIGR02822       287 REFLELAAQHGVRV-TTHTYPLSEADRALRDLKAGRFDGAAVL  328 (329)
T ss_pred             HHHHHHHHhCCCee-EEEEEeHHHHHHHHHHHHcCCCceEEEe
Confidence            88899999999975 5689999999999999999999999987

Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). The gene neighborhood of members of this family is not conserved and it appears that no members are characterized. The sequence of the family includes 6 invariant cysteine residues and one invariant histidine. It appears that no member is characterized.

>KOG0022 consensus Alcohol dehydrogenase, class III [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.94  E-value=1.7e-25  Score=163.71  Aligned_cols=193  Identities=20%  Similarity=0.233  Sum_probs=164.5

Q ss_pred             hhhHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHhcCCCeeEecCCCc-cHHHH
Q 028523            3 GMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGC-YVVGSAGSKDKVDLLKNKFGFDEAFNYKEEP-DLDAA   80 (208)
Q Consensus         3 ~~tA~~~l~~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g~-~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~-~~~~~   80 (208)
                      ..|+|.|..+.+++++|+++.|+| .|++|++++|-||+.|+ ++|.++.++++++.++ +||+++.+|+.+.. ..++.
T Consensus       177 vsTG~GAa~~~Akv~~GstvAVfG-LG~VGLav~~Gaka~GAsrIIgvDiN~~Kf~~ak-~fGaTe~iNp~d~~~~i~ev  254 (375)
T KOG0022|consen  177 VSTGYGAAWNTAKVEPGSTVAVFG-LGGVGLAVAMGAKAAGASRIIGVDINPDKFEKAK-EFGATEFINPKDLKKPIQEV  254 (375)
T ss_pred             ccccchhhhhhcccCCCCEEEEEe-cchHHHHHHHhHHhcCcccEEEEecCHHHHHHHH-hcCcceecChhhccccHHHH
Confidence            568899998999999999999999 69999999999999999 9999999999999999 99999999988532 48889


Q ss_pred             HHhHCCCCccEEEeCCCc-hhHHHHHHhhccC-CEEEEEecccccCCCCCCCccchHHHhhcceeEEEeeccccccchHH
Q 028523           81 LKRYFPEGINIYFENVGG-KMLDAVLLNMRIQ-GRITLCGMISQYNNDKPEGVHNLTCLISKRIRMEGFLVPDYFHLYPK  158 (208)
Q Consensus        81 ~~~~~~~~~d~v~d~~g~-~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  158 (208)
                      +++++++|+|+.|||+|. +.+.+++.+.+.| |.-+.+|....    .......+..++ .+.++.|+..+-+..  +.
T Consensus       255 i~EmTdgGvDysfEc~G~~~~m~~al~s~h~GwG~sv~iGv~~~----~~~i~~~p~~l~-~GR~~~Gs~FGG~K~--~~  327 (375)
T KOG0022|consen  255 IIEMTDGGVDYSFECIGNVSTMRAALESCHKGWGKSVVIGVAAA----GQEISTRPFQLV-TGRTWKGSAFGGFKS--KS  327 (375)
T ss_pred             HHHHhcCCceEEEEecCCHHHHHHHHHHhhcCCCeEEEEEecCC----Ccccccchhhhc-cccEEEEEecccccc--hh
Confidence            999999999999999995 7899999999998 99999998763    233334444444 467788877766543  67


Q ss_pred             HHHHHHHHHHCCCcee--eeeeeecCCcHHHHHHHHhcCCccceEEEEe
Q 028523          159 FLEMMIPRIKEGKIVY--VEDKAEGLESAPAALVGLFSGRNVGKQVVEV  205 (208)
Q Consensus       159 ~~~~~~~~~~~g~~~~--~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~  205 (208)
                      .++.+.+.+.+++++.  .+++++||+++++||+.|.+|+.. |.|+.+
T Consensus       328 ~iP~lV~~y~~~~l~ld~~ITh~l~f~~In~AF~ll~~Gksi-R~vl~~  375 (375)
T KOG0022|consen  328 DIPKLVKDYMKKKLNLDEFITHELPFEEINKAFDLLHEGKSI-RCVLWM  375 (375)
T ss_pred             hhhHHHHHHHhCccchhhhhhcccCHHHHHHHHHHHhCCceE-EEEEeC
Confidence            7899999999998874  588999999999999999999987 777653

>PLN02740 Alcohol dehydrogenase-like

Probab=99.94  E-value=4.9e-25  Score=173.62  Aligned_cols=194  Identities=17%  Similarity=0.195  Sum_probs=156.5

Q ss_pred             chhhHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHhcCCCeeEecCCCc-cHHH
Q 028523            2 PGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGC-YVVGSAGSKDKVDLLKNKFGFDEAFNYKEEP-DLDA   79 (208)
Q Consensus         2 ~~~tA~~~l~~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g~-~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~-~~~~   79 (208)
                      ++.|||+++.+.+++++|++|||+|+ |++|++++|+|+.+|+ +|+++++++++.+.++ ++|++.++++.+.+ ++.+
T Consensus       182 ~~~ta~~~~~~~~~~~~g~~VlV~G~-G~vG~~a~q~ak~~G~~~Vi~~~~~~~r~~~a~-~~Ga~~~i~~~~~~~~~~~  259 (381)
T PLN02740        182 GVSTGVGAAWNTANVQAGSSVAIFGL-GAVGLAVAEGARARGASKIIGVDINPEKFEKGK-EMGITDFINPKDSDKPVHE  259 (381)
T ss_pred             cchhhHHHHHhccCCCCCCEEEEECC-CHHHHHHHHHHHHCCCCcEEEEcCChHHHHHHH-HcCCcEEEecccccchHHH
Confidence            46799998878889999999999995 9999999999999999 6999999999999998 99999999887641 4777


Q ss_pred             HHHhHCCCCccEEEeCCCc-hhHHHHHHhhccC-CEEEEEecccccCCCCCCCccchHHHhhcceeEEEeeccccccchH
Q 028523           80 ALKRYFPEGINIYFENVGG-KMLDAVLLNMRIQ-GRITLCGMISQYNNDKPEGVHNLTCLISKRIRMEGFLVPDYFHLYP  157 (208)
Q Consensus        80 ~~~~~~~~~~d~v~d~~g~-~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  157 (208)
                      .+++.+++++|++||++|+ +.+..++.+++++ |+++.+|...+.    ....+.... +.+++++.|+...++..  .
T Consensus       260 ~v~~~~~~g~dvvid~~G~~~~~~~a~~~~~~g~G~~v~~G~~~~~----~~~~~~~~~-~~~~~~i~g~~~~~~~~--~  332 (381)
T PLN02740        260 RIREMTGGGVDYSFECAGNVEVLREAFLSTHDGWGLTVLLGIHPTP----KMLPLHPME-LFDGRSITGSVFGDFKG--K  332 (381)
T ss_pred             HHHHHhCCCCCEEEECCCChHHHHHHHHhhhcCCCEEEEEccCCCC----ceecccHHH-HhcCCeEEEEecCCCCc--H
Confidence            7877776689999999995 6889999999996 999999975421    111122222 33678888877654321  3


Q ss_pred             HHHHHHHHHHHCCCcee--eeeeeecCCcHHHHHHHHhcCCccceEEEEe
Q 028523          158 KFLEMMIPRIKEGKIVY--VEDKAEGLESAPAALVGLFSGRNVGKQVVEV  205 (208)
Q Consensus       158 ~~~~~~~~~~~~g~~~~--~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~  205 (208)
                      ..++++++++.+|.+++  .++++|+++++++|++.+.+++. .|++|+.
T Consensus       333 ~~~~~~~~~~~~g~i~~~~~it~~~~l~e~~~A~~~~~~~~~-~k~~~~~  381 (381)
T PLN02740        333 SQLPNLAKQCMQGVVNLDGFITHELPFEKINEAFQLLEDGKA-LRCLLHL  381 (381)
T ss_pred             HHHHHHHHHHHcCCCChHHheeEEecHHHHHHHHHHHHCCCc-eeEEEeC
Confidence            45888999999998865  57889999999999999988876 4998863

>KOG0025 consensus Zn2+-binding dehydrogenase (nuclear receptor binding factor-1) [Transcription; Energy production and conversion]

Probab=99.94  E-value=1.9e-25  Score=161.63  Aligned_cols=198  Identities=21%  Similarity=0.244  Sum_probs=160.8

Q ss_pred             chhhHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH---hcCCCeeEecCCCccHH
Q 028523            2 PGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKN---KFGFDEAFNYKEEPDLD   78 (208)
Q Consensus         2 ~~~tA~~~l~~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~---~~g~~~v~~~~~~~~~~   78 (208)
                      .-+|||.+|.++-++.+||+|...||+++||++.+|+||++|++.+.++|+....+.+++   .+|+++||.-.+. .-.
T Consensus       144 NP~TAyrmL~dfv~L~~GD~vIQNganS~VG~~ViQlaka~GiktinvVRdR~~ieel~~~Lk~lGA~~ViTeeel-~~~  222 (354)
T KOG0025|consen  144 NPCTAYRMLKDFVQLNKGDSVIQNGANSGVGQAVIQLAKALGIKTINVVRDRPNIEELKKQLKSLGATEVITEEEL-RDR  222 (354)
T ss_pred             CchHHHHHHHHHHhcCCCCeeeecCcccHHHHHHHHHHHHhCcceEEEeecCccHHHHHHHHHHcCCceEecHHHh-cch
Confidence            568999999999999999999999999999999999999999999999988776665543   6899999865442 111


Q ss_pred             HHHHhHCCC-CccEEEeCCCchhHHHHHHhhccCCEEEEEecccccCCCCCCCccchHHHhhcceeEEEeecccc-----
Q 028523           79 AALKRYFPE-GINIYFENVGGKMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCLISKRIRMEGFLVPDY-----  152 (208)
Q Consensus        79 ~~~~~~~~~-~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----  152 (208)
                      +..+..... ++.+.|||+|+.+.....+.|.+||+++.+|..+.     ++...+...++++++.+.|+++..|     
T Consensus       223 ~~~k~~~~~~~prLalNcVGGksa~~iar~L~~GgtmvTYGGMSk-----qPv~~~ts~lIFKdl~~rGfWvt~W~~~~~  297 (354)
T KOG0025|consen  223 KMKKFKGDNPRPRLALNCVGGKSATEIARYLERGGTMVTYGGMSK-----QPVTVPTSLLIFKDLKLRGFWVTRWKKEHK  297 (354)
T ss_pred             hhhhhhccCCCceEEEeccCchhHHHHHHHHhcCceEEEecCccC-----CCcccccchheeccceeeeeeeeehhhccC
Confidence            111111122 78999999999999999999999999999999873     5566777889999999999999988     


Q ss_pred             -ccchHHHHHHHHHHHHCCCceeeeeeeecCCcHHHHHHHHhcCC-ccceEEEEe
Q 028523          153 -FHLYPKFLEMMIPRIKEGKIVYVEDKAEGLESAPAALVGLFSGR-NVGKQVVEV  205 (208)
Q Consensus       153 -~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~-~~gk~vv~~  205 (208)
                       ++...+...++.+++..|+++.+.....+|++...|++...... ..||-++.+
T Consensus       298 ~pe~~~~~i~~~~~l~~~G~i~~~~~e~v~L~~~~tald~~L~~~~~~~Kq~i~~  352 (354)
T KOG0025|consen  298 SPEERKEMIDELCDLYRRGKLKAPNCEKVPLADHKTALDAALSKFGKSGKQIIVL  352 (354)
T ss_pred             CcHHHHHHHHHHHHHHHcCeeccccceeeechhhhHHHHHHHHHhccCCceEEEe
Confidence             34445778999999999999999888899999988887655544 335666654

>PLN02514 cinnamyl-alcohol dehydrogenase

Probab=99.94  E-value=8.3e-25  Score=170.95  Aligned_cols=188  Identities=20%  Similarity=0.204  Sum_probs=153.3

Q ss_pred             chhhHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHHH
Q 028523            2 PGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAAL   81 (208)
Q Consensus         2 ~~~tA~~~l~~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~~   81 (208)
                      ++.|||+++......++|++++|+| +|++|++++|+|+.+|++++++++++++...+.+++|++.++++.+.    +.+
T Consensus       164 ~~~ta~~al~~~~~~~~g~~vlV~G-~G~vG~~av~~Ak~~G~~vi~~~~~~~~~~~~~~~~Ga~~~i~~~~~----~~~  238 (357)
T PLN02514        164 AGVTVYSPLSHFGLKQSGLRGGILG-LGGVGHMGVKIAKAMGHHVTVISSSDKKREEALEHLGADDYLVSSDA----AEM  238 (357)
T ss_pred             hHHHHHHHHHHcccCCCCCeEEEEc-ccHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHhcCCcEEecCCCh----HHH
Confidence            4678999997777778999999997 59999999999999999999998888877666547999887765432    234


Q ss_pred             HhHCCCCccEEEeCCCc-hhHHHHHHhhccCCEEEEEecccccCCCCCCCccchHHHhhcceeEEEeeccccccchHHHH
Q 028523           82 KRYFPEGINIYFENVGG-KMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCLISKRIRMEGFLVPDYFHLYPKFL  160 (208)
Q Consensus        82 ~~~~~~~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (208)
                      .+.+. ++|++||++|. ..+..++++++++|+++.+|...+      .........+.+++++.|+....     ...+
T Consensus       239 ~~~~~-~~D~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~------~~~~~~~~~~~~~~~i~g~~~~~-----~~~~  306 (357)
T PLN02514        239 QEAAD-SLDYIIDTVPVFHPLEPYLSLLKLDGKLILMGVINT------PLQFVTPMLMLGRKVITGSFIGS-----MKET  306 (357)
T ss_pred             HHhcC-CCcEEEECCCchHHHHHHHHHhccCCEEEEECCCCC------CCcccHHHHhhCCcEEEEEecCC-----HHHH
Confidence            44433 69999999995 688999999999999999997642      12344556777889999887654     4568


Q ss_pred             HHHHHHHHCCCceeeeeeeecCCcHHHHHHHHhcCCccceEEEEecC
Q 028523          161 EMMIPRIKEGKIVYVEDKAEGLESAPAALVGLFSGRNVGKQVVEVAT  207 (208)
Q Consensus       161 ~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~~~  207 (208)
                      +++++++++|.+.+.+ ++|+++++.+|++.+.+++..||+|+.++.
T Consensus       307 ~~~~~~~~~g~l~~~i-~~~~l~~~~~A~~~~~~~~~~gk~v~~~~~  352 (357)
T PLN02514        307 EEMLEFCKEKGLTSMI-EVVKMDYVNTAFERLEKNDVRYRFVVDVAG  352 (357)
T ss_pred             HHHHHHHHhCCCcCcE-EEEcHHHHHHHHHHHHcCCCceeEEEEccc
Confidence            8899999999998776 479999999999999999988999998864

>TIGR02818 adh_III_F_hyde S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase

Probab=99.94  E-value=1.5e-24  Score=170.23  Aligned_cols=194  Identities=18%  Similarity=0.184  Sum_probs=151.6

Q ss_pred             chhhHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHhcCCCeeEecCCC-ccHHH
Q 028523            2 PGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGC-YVVGSAGSKDKVDLLKNKFGFDEAFNYKEE-PDLDA   79 (208)
Q Consensus         2 ~~~tA~~~l~~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g~-~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~-~~~~~   79 (208)
                      +++|||+++.+.+++++|++|||+|+ |++|++++|+|+.+|+ +|+++++++++.+.++ ++|++.++++++. .++.+
T Consensus       169 ~~~ta~~a~~~~~~~~~g~~VlV~G~-G~iG~~a~q~Ak~~G~~~Vi~~~~~~~~~~~a~-~~Ga~~~i~~~~~~~~~~~  246 (368)
T TIGR02818       169 GVTTGIGAVLNTAKVEEGDTVAVFGL-GGIGLSVIQGARMAKASRIIAIDINPAKFELAK-KLGATDCVNPNDYDKPIQE  246 (368)
T ss_pred             hhHHHHHHHHHhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHH-HhCCCeEEcccccchhHHH
Confidence            56799999988889999999999985 9999999999999999 8999999999999998 9999999987742 14667


Q ss_pred             HHHhHCCCCccEEEeCCCc-hhHHHHHHhhccC-CEEEEEecccccCCCCCCCccchHHHhhcceeEEEeeccccccchH
Q 028523           80 ALKRYFPEGINIYFENVGG-KMLDAVLLNMRIQ-GRITLCGMISQYNNDKPEGVHNLTCLISKRIRMEGFLVPDYFHLYP  157 (208)
Q Consensus        80 ~~~~~~~~~~d~v~d~~g~-~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  157 (208)
                      .+++.+++++|++|||+|+ ..+..++++++++ |+++.+|.....    ..........+ ++..+.++.....  ...
T Consensus       247 ~v~~~~~~g~d~vid~~G~~~~~~~~~~~~~~~~G~~v~~g~~~~~----~~~~~~~~~~~-~~~~~~g~~~~~~--~~~  319 (368)
T TIGR02818       247 VIVEITDGGVDYSFECIGNVNVMRAALECCHKGWGESIIIGVAGAG----QEISTRPFQLV-TGRVWRGSAFGGV--KGR  319 (368)
T ss_pred             HHHHHhCCCCCEEEECCCCHHHHHHHHHHhhcCCCeEEEEeccCCC----CcccccHHHHh-ccceEEEeeccCC--CcH
Confidence            7777776689999999995 6788999999886 999999975321    11112222222 2334555543221  114


Q ss_pred             HHHHHHHHHHHCCCce--eeeeeeecCCcHHHHHHHHhcCCccceEEEEe
Q 028523          158 KFLEMMIPRIKEGKIV--YVEDKAEGLESAPAALVGLFSGRNVGKQVVEV  205 (208)
Q Consensus       158 ~~~~~~~~~~~~g~~~--~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~  205 (208)
                      ..+.++++++.+|.++  +.++++|+|+++.+|++.+.+++. .|++|.+
T Consensus       320 ~~~~~~~~~~~~g~i~~~~~it~~~~l~~~~~A~~~~~~~~~-~k~~v~~  368 (368)
T TIGR02818       320 TELPGIVEQYMKGEIALDDFVTHTMPLEDINEAFDLMHEGKS-IRTVIHY  368 (368)
T ss_pred             HHHHHHHHHHHCCCCCchhheeEEecHHHHHHHHHHHhCCCc-eeEEeeC
Confidence            5688899999999886  457899999999999999988765 6998864

The members of this protein family show dual function. First, they remove formaldehyde, a toxic metabolite, by acting as S-(hydroxymethyl)glutathione dehydrogenase (1.1.1.284). S-(hydroxymethyl)glutathione can form spontaneously from formaldehyde and glutathione, and so this enzyme previously was designated glutathione-dependent formaldehyde dehydrogenase. These same proteins are also designated alcohol dehydrogenase (EC 1.1.1.1) of class III, for activities that do not require glutathione; they tend to show poor activity for ethanol among their various substrate alcohols.

>cd08300 alcohol_DH_class_III class III alcohol dehydrogenases

Probab=99.94  E-value=2.2e-24  Score=169.31  Aligned_cols=193  Identities=23%  Similarity=0.270  Sum_probs=152.5

Q ss_pred             chhhHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHhcCCCeeEecCCCc-cHHH
Q 028523            2 PGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGC-YVVGSAGSKDKVDLLKNKFGFDEAFNYKEEP-DLDA   79 (208)
Q Consensus         2 ~~~tA~~~l~~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g~-~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~-~~~~   79 (208)
                      +++|||+++.+.+++++|++|||+|+ |++|++++|+|+.+|+ +|+++++++++.+.++ ++|++.++++++.+ ++.+
T Consensus       170 ~~~ta~~a~~~~~~~~~g~~VlV~G~-G~vG~~a~~~ak~~G~~~vi~~~~~~~~~~~~~-~lGa~~~i~~~~~~~~~~~  247 (368)
T cd08300         170 GVTTGYGAVLNTAKVEPGSTVAVFGL-GAVGLAVIQGAKAAGASRIIGIDINPDKFELAK-KFGATDCVNPKDHDKPIQQ  247 (368)
T ss_pred             chhhhHHHHHHhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHH-HcCCCEEEcccccchHHHH
Confidence            56799999878889999999999985 9999999999999999 7999999999999998 99999999887642 4777


Q ss_pred             HHHhHCCCCccEEEeCCCc-hhHHHHHHhhccC-CEEEEEecccccCCCCCCCccchHHHhhcceeEEEeeccccccchH
Q 028523           80 ALKRYFPEGINIYFENVGG-KMLDAVLLNMRIQ-GRITLCGMISQYNNDKPEGVHNLTCLISKRIRMEGFLVPDYFHLYP  157 (208)
Q Consensus        80 ~~~~~~~~~~d~v~d~~g~-~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  157 (208)
                      .+.+.+++++|++||++|+ ..+..++++++++ |+++.+|.....    ........... .+..+.++....+.  ..
T Consensus       248 ~v~~~~~~g~d~vid~~g~~~~~~~a~~~l~~~~G~~v~~g~~~~~----~~~~~~~~~~~-~~~~~~g~~~~~~~--~~  320 (368)
T cd08300         248 VLVEMTDGGVDYTFECIGNVKVMRAALEACHKGWGTSVIIGVAAAG----QEISTRPFQLV-TGRVWKGTAFGGWK--SR  320 (368)
T ss_pred             HHHHHhCCCCcEEEECCCChHHHHHHHHhhccCCCeEEEEccCCCC----CccccCHHHHh-hcCeEEEEEecccC--cH
Confidence            7887776689999999996 6889999999886 999999875321    11111222222 33455555543332  24


Q ss_pred             HHHHHHHHHHHCCCcee--eeeeeecCCcHHHHHHHHhcCCccceEEEE
Q 028523          158 KFLEMMIPRIKEGKIVY--VEDKAEGLESAPAALVGLFSGRNVGKQVVE  204 (208)
Q Consensus       158 ~~~~~~~~~~~~g~~~~--~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~  204 (208)
                      +.+.++++++.+|.+++  .++++|+|+++.+|++.+.+++. .|++|+
T Consensus       321 ~~~~~~~~~~~~g~l~~~~~i~~~~~le~~~~A~~~~~~~~~-~k~~~~  368 (368)
T cd08300         321 SQVPKLVEDYMKGKIKVDEFITHTMPLDEINEAFDLMHAGKS-IRTVVK  368 (368)
T ss_pred             HHHHHHHHHHHcCCCChhhceeeeEcHHHHHHHHHHHhCCCC-ceeeeC
Confidence            56788999999999985  47889999999999999988775 588873

Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dim

>cd05288 PGDH Prostaglandin dehydrogenases

Probab=99.93  E-value=2.3e-24  Score=166.81  Aligned_cols=201  Identities=53%  Similarity=0.885  Sum_probs=163.5

Q ss_pred             chhhHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHHH
Q 028523            2 PGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAAL   81 (208)
Q Consensus         2 ~~~tA~~~l~~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~~   81 (208)
                      ++.|||+++...+.+.++++|+|+|++|++|++++|+++..|++|+++++++++.+.+++.+|++.++++++. ++..++
T Consensus       129 ~~~ta~~~l~~~~~~~~~~~vlI~g~~g~ig~~~~~~a~~~G~~vi~~~~~~~~~~~~~~~~g~~~~~~~~~~-~~~~~v  207 (329)
T cd05288         129 TGLTAYFGLTEIGKPKPGETVVVSAAAGAVGSVVGQIAKLLGARVVGIAGSDEKCRWLVEELGFDAAINYKTP-DLAEAL  207 (329)
T ss_pred             HHHHHHHHHHhccCCCCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhhcCCceEEecCCh-hHHHHH
Confidence            5678999998888899999999999999999999999999999999999999999999833999889988876 677777


Q ss_pred             HhHCCCCccEEEeCCCchhHHHHHHhhccCCEEEEEecccccCCCCCCCccchHHHhhcceeEEEeeccccccchHHHHH
Q 028523           82 KRYFPEGINIYFENVGGKMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCLISKRIRMEGFLVPDYFHLYPKFLE  161 (208)
Q Consensus        82 ~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  161 (208)
                      .+..++++|+++||+|+..+..++++++++|+++.+|..............+....+.+++++.+...........+.+.
T Consensus       208 ~~~~~~~~d~vi~~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  287 (329)
T cd05288         208 KEAAPDGIDVYFDNVGGEILDAALTLLNKGGRIALCGAISQYNATEPPGPKNLGNIITKRLTMQGFIVSDYADRFPEALA  287 (329)
T ss_pred             HHhccCCceEEEEcchHHHHHHHHHhcCCCceEEEEeeccCcccccccccccHHHHhhCcceEEeecchhhHHHHHHHHH
Confidence            77765589999999999899999999999999999987543211000001234556778888888766543333356788


Q ss_pred             HHHHHHHCCCceeeeeeeecCCcHHHHHHHHhcCCccceEEE
Q 028523          162 MMIPRIKEGKIVYVEDKAEGLESAPAALVGLFSGRNVGKQVV  203 (208)
Q Consensus       162 ~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv  203 (208)
                      ++++++.+|.+++....+++++++.++++.+.+++..+|+++
T Consensus       288 ~~~~~~~~g~i~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvv  329 (329)
T cd05288         288 ELAKWLAEGKLKYREDVVEGLENAPEAFLGLFTGKNTGKLVV  329 (329)
T ss_pred             HHHHHHHCCCccccccccccHHHHHHHHHHHhcCCCccceeC
Confidence            899999999998776677899999999999998888888874

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino

>cd05282 ETR_like 2-enoyl thioester reductase-like

Probab=99.93  E-value=2.9e-24  Score=165.74  Aligned_cols=196  Identities=23%  Similarity=0.302  Sum_probs=164.3

Q ss_pred             chhhHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHHH
Q 028523            2 PGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAAL   81 (208)
Q Consensus         2 ~~~tA~~~l~~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~~   81 (208)
                      +++|||+++...+.+.+|++|+|+|++|++|++++|+|+.+|++++++++++++.+.++ ++|++.++++.+. ++...+
T Consensus       122 ~~~ta~~~~~~~~~~~~~~~vlI~g~~~~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~g~~~~~~~~~~-~~~~~~  199 (323)
T cd05282         122 NPLTAWLMLTEYLKLPPGDWVIQNAANSAVGRMLIQLAKLLGFKTINVVRRDEQVEELK-ALGADEVIDSSPE-DLAQRV  199 (323)
T ss_pred             cHHHHHHHHHHhccCCCCCEEEEcccccHHHHHHHHHHHHCCCeEEEEecChHHHHHHH-hcCCCEEecccch-hHHHHH
Confidence            56789999988888999999999999999999999999999999999999999999998 8999999988775 677778


Q ss_pred             HhHCCC-CccEEEeCCCchhHHHHHHhhccCCEEEEEecccccCCCCCCCccchHHHhhcceeEEEeecccc-----ccc
Q 028523           82 KRYFPE-GINIYFENVGGKMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCLISKRIRMEGFLVPDY-----FHL  155 (208)
Q Consensus        82 ~~~~~~-~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~  155 (208)
                      .+.+++ ++|+++||+|+......+++++++|+++.+|.....     ....+...+..+++++.+.....+     +..
T Consensus       200 ~~~~~~~~~d~vl~~~g~~~~~~~~~~l~~~g~~v~~g~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  274 (323)
T cd05282         200 KEATGGAGARLALDAVGGESATRLARSLRPGGTLVNYGLLSGE-----PVPFPRSVFIFKDITVRGFWLRQWLHSATKEA  274 (323)
T ss_pred             HHHhcCCCceEEEECCCCHHHHHHHHhhCCCCEEEEEccCCCC-----CCCCCHHHHhhcCceEEEEEehHhhccCCHHH
Confidence            777776 899999999988888999999999999999875431     122333444448888888776543     234


Q ss_pred             hHHHHHHHHHHHHCCCceeeeeeeecCCcHHHHHHHHhcCCccceEEEE
Q 028523          156 YPKFLEMMIPRIKEGKIVYVEDKAEGLESAPAALVGLFSGRNVGKQVVE  204 (208)
Q Consensus       156 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~  204 (208)
                      ..+.+.++++++.++.+.+...++++++++.++++.+.++...+|+|++
T Consensus       275 ~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~a~~~~~~~~~~~kvv~~  323 (323)
T cd05282         275 KQETFAEVIKLVEAGVLTTPVGAKFPLEDFEEAVAAAEQPGRGGKVLLT  323 (323)
T ss_pred             HHHHHHHHHHHHhCCCcccCccceecHHHHHHHHHHHhcCCCCceEeeC
Confidence            4567888999999999988777889999999999999998888899863

2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossman

>cd08301 alcohol_DH_plants Plant alcohol dehydrogenase

Probab=99.93  E-value=3.3e-24  Score=168.41  Aligned_cols=192  Identities=19%  Similarity=0.216  Sum_probs=154.7

Q ss_pred             chhhHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHhcCCCeeEecCCC-ccHHH
Q 028523            2 PGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGC-YVVGSAGSKDKVDLLKNKFGFDEAFNYKEE-PDLDA   79 (208)
Q Consensus         2 ~~~tA~~~l~~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g~-~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~-~~~~~   79 (208)
                      +++|||+++.+.+++++|++|+|+|+ |++|++++|+|+.+|+ +|+++++++++.+.++ ++|++.++++.+. +.+.+
T Consensus       171 ~~~ta~~~~~~~~~~~~g~~VlV~G~-g~vG~~a~q~ak~~G~~~vi~~~~~~~~~~~~~-~~Ga~~~i~~~~~~~~~~~  248 (369)
T cd08301         171 GVSTGLGAAWNVAKVKKGSTVAIFGL-GAVGLAVAEGARIRGASRIIGVDLNPSKFEQAK-KFGVTEFVNPKDHDKPVQE  248 (369)
T ss_pred             hhhHHHHHHHhhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHH-HcCCceEEcccccchhHHH
Confidence            45789998888889999999999985 9999999999999999 8999999999999998 8999988887752 15666


Q ss_pred             HHHhHCCCCccEEEeCCCc-hhHHHHHHhhccC-CEEEEEecccccCCCCCCCccchHHHhhcceeEEEeeccccccchH
Q 028523           80 ALKRYFPEGINIYFENVGG-KMLDAVLLNMRIQ-GRITLCGMISQYNNDKPEGVHNLTCLISKRIRMEGFLVPDYFHLYP  157 (208)
Q Consensus        80 ~~~~~~~~~~d~v~d~~g~-~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  157 (208)
                      .+++.+++++|++||++|+ ..+..++.+++++ |+++.+|.....    .........+ .+++++.|+....+.  .+
T Consensus       249 ~v~~~~~~~~d~vid~~G~~~~~~~~~~~~~~~~g~~v~~g~~~~~----~~~~~~~~~~-~~~~~i~g~~~~~~~--~~  321 (369)
T cd08301         249 VIAEMTGGGVDYSFECTGNIDAMISAFECVHDGWGVTVLLGVPHKD----AVFSTHPMNL-LNGRTLKGTLFGGYK--PK  321 (369)
T ss_pred             HHHHHhCCCCCEEEECCCChHHHHHHHHHhhcCCCEEEEECcCCCC----cccccCHHHH-hcCCeEEEEecCCCC--hH
Confidence            7777776689999999995 5788999999996 999999986521    1112222333 468889887765432  13


Q ss_pred             HHHHHHHHHHHCCCcee--eeeeeecCCcHHHHHHHHhcCCccceEEE
Q 028523          158 KFLEMMIPRIKEGKIVY--VEDKAEGLESAPAALVGLFSGRNVGKQVV  203 (208)
Q Consensus       158 ~~~~~~~~~~~~g~~~~--~~~~~~~~~~~~~a~~~~~~~~~~gk~vv  203 (208)
                      ..++++++++.+|.+++  .++++|+++++++|++.+.+++.. |++|
T Consensus       322 ~~~~~~~~~~~~g~~~~~~~i~~~~~l~~~~~A~~~~~~~~~~-k~~~  368 (369)
T cd08301         322 TDLPNLVEKYMKKELELEKFITHELPFSEINKAFDLLLKGECL-RCIL  368 (369)
T ss_pred             HHHHHHHHHHHcCCCCcHHheeeeecHHHHHHHHHHHHCCCce-eEEe
Confidence            46888999999998765  467899999999999999998864 8876

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the

>cd08238 sorbose_phosphate_red L-sorbose-1-phosphate reductase

Probab=99.93  E-value=2.1e-24  Score=171.50  Aligned_cols=185  Identities=16%  Similarity=0.144  Sum_probs=150.3

Q ss_pred             HhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC---EEEEEeCCHHHHHHHHHhc--------CCC-eeEecCCCccHHH
Q 028523           12 EVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGC---YVVGSAGSKDKVDLLKNKF--------GFD-EAFNYKEEPDLDA   79 (208)
Q Consensus        12 ~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g~---~v~~~~~s~~~~~~~~~~~--------g~~-~v~~~~~~~~~~~   79 (208)
                      +.+++++|++|+|+|++|++|++++|+|+.+|+   +|+++++++++++.++ ++        |++ .++++++.+++.+
T Consensus       169 ~~~~~~~g~~VlV~G~~G~vG~~aiq~ak~~G~g~~~Vi~~~~~~~r~~~a~-~~~~~~~~~~Ga~~~~i~~~~~~~~~~  247 (410)
T cd08238         169 HRMGIKPGGNTAILGGAGPMGLMAIDYAIHGPIGPSLLVVTDVNDERLARAQ-RLFPPEAASRGIELLYVNPATIDDLHA  247 (410)
T ss_pred             hhcCCCCCCEEEEEeCCCHHHHHHHHHHHhcccCCceEEEEcCCHHHHHHHH-HhccccccccCceEEEECCCccccHHH
Confidence            457889999999999899999999999999854   8999999999999998 76        665 4677764226778


Q ss_pred             HHHhHCCC-CccEEEeCCC-chhHHHHHHhhccCCEEEEEecccccCCCCCCCccchHHHhhcceeEEEeeccccccchH
Q 028523           80 ALKRYFPE-GINIYFENVG-GKMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCLISKRIRMEGFLVPDYFHLYP  157 (208)
Q Consensus        80 ~~~~~~~~-~~d~v~d~~g-~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  157 (208)
                      .+++.+++ ++|++||++| .+.+..++++++++|+++.++......   ....++...++.+++++.|+....     .
T Consensus       248 ~v~~~t~g~g~D~vid~~g~~~~~~~a~~~l~~~G~~v~~~g~~~~~---~~~~~~~~~~~~~~~~i~g~~~~~-----~  319 (410)
T cd08238         248 TLMELTGGQGFDDVFVFVPVPELVEEADTLLAPDGCLNFFAGPVDKN---FSAPLNFYNVHYNNTHYVGTSGGN-----T  319 (410)
T ss_pred             HHHHHhCCCCCCEEEEcCCCHHHHHHHHHHhccCCeEEEEEccCCCC---ccccccHHHhhhcCcEEEEeCCCC-----H
Confidence            88888877 8999999998 578899999999999888775432110   112345567778899999877543     4


Q ss_pred             HHHHHHHHHHHCCCcee--eeeeeecCCcHHHHHHHHhcCCccceEEEEec
Q 028523          158 KFLEMMIPRIKEGKIVY--VEDKAEGLESAPAALVGLFSGRNVGKQVVEVA  206 (208)
Q Consensus       158 ~~~~~~~~~~~~g~~~~--~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~~  206 (208)
                      ..++++++++.+|++++  .++++|+++++.+|++.+. ++..||+||.++
T Consensus       320 ~~~~~~~~li~~g~i~~~~~it~~~~l~~~~~A~~~~~-~~~~gKvvl~~~  369 (410)
T cd08238         320 DDMKEAIDLMAAGKLNPARMVTHIGGLNAAAETTLNLP-GIPGGKKLIYTQ  369 (410)
T ss_pred             HHHHHHHHHHHcCCCchhhcEEEEecHHHHHHHHHHhh-ccCCceEEEECC
Confidence            56889999999999987  5788999999999999999 777899999874

L-sorbose-1-phosphate reductase, a member of the MDR family, catalyzes the NADPH-dependent conversion of l-sorbose 1-phosphate to d-glucitol 6-phosphate in the metabolism of L-sorbose to (also converts d-fructose 1-phosphate to d-mannitol 6-phosphate). The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the found

>cd08244 MDR_enoyl_red Possible enoyl reductase

Probab=99.93  E-value=6.5e-24  Score=163.86  Aligned_cols=196  Identities=26%  Similarity=0.348  Sum_probs=163.4

Q ss_pred             chhhHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHHH
Q 028523            2 PGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAAL   81 (208)
Q Consensus         2 ~~~tA~~~l~~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~~   81 (208)
                      +++||| ++...++++++++++|+|++|++|++++|+|+..|++|+++++++++.+.++ ++|++.++++++. ++...+
T Consensus       127 ~~~ta~-~~~~~~~~~~~~~vlI~g~~~~~g~~~~~la~~~g~~v~~~~~~~~~~~~~~-~~g~~~~~~~~~~-~~~~~~  203 (324)
T cd08244         127 DGRTAL-GLLDLATLTPGDVVLVTAAAGGLGSLLVQLAKAAGATVVGAAGGPAKTALVR-ALGADVAVDYTRP-DWPDQV  203 (324)
T ss_pred             hHHHHH-HHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HcCCCEEEecCCc-cHHHHH
Confidence            457785 4557788999999999999999999999999999999999999999999997 8999888888876 777777


Q ss_pred             HhHCCC-CccEEEeCCCchhHHHHHHhhccCCEEEEEecccccCCCCCCCccchHHHhhcceeEEEeecccc-ccchHHH
Q 028523           82 KRYFPE-GINIYFENVGGKMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCLISKRIRMEGFLVPDY-FHLYPKF  159 (208)
Q Consensus        82 ~~~~~~-~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~  159 (208)
                      .+..++ ++|+++|++|+.....++++++++|+++.+|.....     ....+....+.+++++.+...... +....+.
T Consensus       204 ~~~~~~~~~d~vl~~~g~~~~~~~~~~l~~~g~~v~~g~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  278 (324)
T cd08244         204 REALGGGGVTVVLDGVGGAIGRAALALLAPGGRFLTYGWASGE-----WTALDEDDARRRGVTVVGLLGVQAERGGLRAL  278 (324)
T ss_pred             HHHcCCCCceEEEECCChHhHHHHHHHhccCcEEEEEecCCCC-----CCccCHHHHhhCCcEEEEeecccCCHHHHHHH
Confidence            777766 899999999988889999999999999999875421     112333456788888888776543 3334567


Q ss_pred             HHHHHHHHHCCCceeeeeeeecCCcHHHHHHHHhcCCccceEEEEe
Q 028523          160 LEMMIPRIKEGKIVYVEDKAEGLESAPAALVGLFSGRNVGKQVVEV  205 (208)
Q Consensus       160 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~  205 (208)
                      +.+.++++.++.+.+.+...++++++.+|++.+.++...+|+++++
T Consensus       279 ~~~~~~~l~~~~l~~~~~~~~~~~~~~~a~~~~~~~~~~~kvv~~~  324 (324)
T cd08244         279 EARALAEAAAGRLVPVVGQTFPLERAAEAHAALEARSTVGKVLLLP  324 (324)
T ss_pred             HHHHHHHHHCCCccCccceEEeHHHHHHHHHHHHcCCCCceEEEeC
Confidence            8889999999999877778899999999999999999999999864

Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydr

>cd08277 liver_alcohol_DH_like Liver alcohol dehydrogenase

Probab=99.93  E-value=5.8e-24  Score=166.75  Aligned_cols=192  Identities=19%  Similarity=0.214  Sum_probs=152.5

Q ss_pred             chhhHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHhcCCCeeEecCCCc-cHHH
Q 028523            2 PGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGC-YVVGSAGSKDKVDLLKNKFGFDEAFNYKEEP-DLDA   79 (208)
Q Consensus         2 ~~~tA~~~l~~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g~-~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~-~~~~   79 (208)
                      +++|||+++.+.+++++|++|+|+| +|++|++++|+++.+|+ +|+++++++++.+.++ ++|++.++++.+.+ ++.+
T Consensus       168 ~~~ta~~~~~~~~~~~~g~~vlV~G-~g~vG~~~~~~a~~~G~~~Vi~~~~~~~~~~~~~-~~ga~~~i~~~~~~~~~~~  245 (365)
T cd08277         168 GFSTGYGAAWNTAKVEPGSTVAVFG-LGAVGLSAIMGAKIAGASRIIGVDINEDKFEKAK-EFGATDFINPKDSDKPVSE  245 (365)
T ss_pred             hhHHHHHHHHhhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHH-HcCCCcEeccccccchHHH
Confidence            5679999987888999999999997 59999999999999999 7999999999999998 89999998876531 3566


Q ss_pred             HHHhHCCCCccEEEeCCCc-hhHHHHHHhhccC-CEEEEEecccccCCCCCCCccchHHHhhcceeEEEeeccccccchH
Q 028523           80 ALKRYFPEGINIYFENVGG-KMLDAVLLNMRIQ-GRITLCGMISQYNNDKPEGVHNLTCLISKRIRMEGFLVPDYFHLYP  157 (208)
Q Consensus        80 ~~~~~~~~~~d~v~d~~g~-~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  157 (208)
                      .+++.+++++|++||++|+ ..+..++++++++ |+++.+|...+.     ....+...++ .++++.++....+.  ..
T Consensus       246 ~~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~-----~~~~~~~~~~-~~~~i~g~~~~~~~--~~  317 (365)
T cd08277         246 VIREMTGGGVDYSFECTGNADLMNEALESTKLGWGVSVVVGVPPGA-----ELSIRPFQLI-LGRTWKGSFFGGFK--SR  317 (365)
T ss_pred             HHHHHhCCCCCEEEECCCChHHHHHHHHhcccCCCEEEEEcCCCcc-----ccccCHhHHh-hCCEEEeeecCCCC--hH
Confidence            7777766689999999994 6788999999885 999999986421     1112233333 37788877765432  13


Q ss_pred             HHHHHHHHHHHCCCce--eeeeeeecCCcHHHHHHHHhcCCccceEEEE
Q 028523          158 KFLEMMIPRIKEGKIV--YVEDKAEGLESAPAALVGLFSGRNVGKQVVE  204 (208)
Q Consensus       158 ~~~~~~~~~~~~g~~~--~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~  204 (208)
                      ..+.+++++++++.++  +.++++|+++++++|++.+.+++ ..|+++.
T Consensus       318 ~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~-~~k~~i~  365 (365)
T cd08277         318 SDVPKLVSKYMNKKFDLDELITHVLPFEEINKGFDLMKSGE-CIRTVIT  365 (365)
T ss_pred             HHHHHHHHHHHCCCcChhHheeeEEchhhHHHHHHHHHCCC-CceEeeC
Confidence            4578899999998765  56788999999999999998887 4588763

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ i

>cd08246 crotonyl_coA_red crotonyl-CoA reductase

Probab=99.93  E-value=1e-23  Score=166.89  Aligned_cols=192  Identities=21%  Similarity=0.295  Sum_probs=157.2

Q ss_pred             chhhHHHHHHHh--cCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeEecCCCc----
Q 028523            2 PGMTAYAGFFEV--CSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEP----   75 (208)
Q Consensus         2 ~~~tA~~~l~~~--~~~~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~----   75 (208)
                      +++|||+++...  +++++|++|+|+|++|++|++++|+++.+|++++++++++++.+.++ ++|++.++++++.+    
T Consensus       175 ~~~tA~~al~~~~~~~~~~g~~vlV~ga~g~iG~a~~~lak~~G~~vv~~~~s~~~~~~~~-~~G~~~~i~~~~~~~~~~  253 (393)
T cd08246         175 VGATAYRMLFGWNPNTVKPGDNVLIWGASGGLGSMAIQLARAAGANPVAVVSSEEKAEYCR-ALGAEGVINRRDFDHWGV  253 (393)
T ss_pred             cHHHHHHHHhhcccccCCCCCEEEEECCCcHHHHHHHHHHHHcCCeEEEEeCCHHHHHHHH-HcCCCEEEcccccccccc
Confidence            578999998765  68899999999999999999999999999999999999999999998 89999888864320    


Q ss_pred             -----------------cHHHHHHhHCCC--CccEEEeCCCchhHHHHHHhhccCCEEEEEecccccCCCCCCCccchHH
Q 028523           76 -----------------DLDAALKRYFPE--GINIYFENVGGKMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTC  136 (208)
Q Consensus        76 -----------------~~~~~~~~~~~~--~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~  136 (208)
                                       .+...+.+.+++  ++|++||++|+..+..++++++++|+++.+|.....     ....+...
T Consensus       254 ~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~g~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~-----~~~~~~~~  328 (393)
T cd08246         254 LPDVNSEAYTAWTKEARRFGKAIWDILGGREDPDIVFEHPGRATFPTSVFVCDRGGMVVICAGTTGY-----NHTYDNRY  328 (393)
T ss_pred             cccccchhhhhhhhccchHHHHHHHHhCCCCCCeEEEECCchHhHHHHHHHhccCCEEEEEcccCCC-----CCCCcHHH
Confidence                             244556666665  699999999988899999999999999999875421     12234455


Q ss_pred             HhhcceeEEEeeccccccchHHHHHHHHHHHHCCCceeeeeeeecCCcHHHHHHHHhcC-CccceEEEE
Q 028523          137 LISKRIRMEGFLVPDYFHLYPKFLEMMIPRIKEGKIVYVEDKAEGLESAPAALVGLFSG-RNVGKQVVE  204 (208)
Q Consensus       137 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~-~~~gk~vv~  204 (208)
                      ++.++.++.+.+...     .+.+.++++++.++.+.+.++++++++++.++++.+.++ ...||+++-
T Consensus       329 l~~~~~~i~g~~~~~-----~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~a~~~~~~~~~~~gkvvv~  392 (393)
T cd08246         329 LWMRQKRIQGSHFAN-----DREAAEANRLVMKGRIDPCLSKVFSLDETPDAHQLMHRNQHHVGNMAVL  392 (393)
T ss_pred             HhhheeEEEecccCc-----HHHHHHHHHHHHcCCceeeeeEEEeHHHHHHHHHHHHhCccccceEEEe
Confidence            566777777765543     345778899999999988777899999999999999998 788999874

Crotonyl-CoA reductase, a member of the medium chain dehydrogenase/reductase family, catalyzes the NADPH-dependent conversion of crotonyl-CoA to butyryl-CoA, a step in (2S)-methylmalonyl-CoA production for straight-chain fatty acid biosynthesis. Like enoyl reductase, another enzyme in fatty acid synthesis, crotonyl-CoA reductase is a member of the zinc-dependent alcohol dehydrogenase-like medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossma

>cd08296 CAD_like Cinnamyl alcohol dehydrogenases (CAD)

Probab=99.93  E-value=9.4e-24  Score=163.69  Aligned_cols=185  Identities=22%  Similarity=0.283  Sum_probs=155.7

Q ss_pred             chhhHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHHH
Q 028523            2 PGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAAL   81 (208)
Q Consensus         2 ~~~tA~~~l~~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~~   81 (208)
                      +++|||+++.. ..+.++++|+|+| +|++|++++|+|+.+|++|+++++++++.+.++ ++|++.++++.+. ++...+
T Consensus       148 ~~~ta~~~~~~-~~~~~~~~vlV~g-~g~iG~~~~~~a~~~G~~vi~~~~~~~~~~~~~-~~g~~~~i~~~~~-~~~~~~  223 (333)
T cd08296         148 AGVTTFNALRN-SGAKPGDLVAVQG-IGGLGHLAVQYAAKMGFRTVAISRGSDKADLAR-KLGAHHYIDTSKE-DVAEAL  223 (333)
T ss_pred             hhHHHHHHHHh-cCCCCCCEEEEEC-CcHHHHHHHHHHHHCCCeEEEEeCChHHHHHHH-HcCCcEEecCCCc-cHHHHH
Confidence            46789999965 4899999999999 799999999999999999999999999999998 8999999988876 676666


Q ss_pred             HhHCCCCccEEEeCCC-chhHHHHHHhhccCCEEEEEecccccCCCCCCCccchHHHhhcceeEEEeeccccccchHHHH
Q 028523           82 KRYFPEGINIYFENVG-GKMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCLISKRIRMEGFLVPDYFHLYPKFL  160 (208)
Q Consensus        82 ~~~~~~~~d~v~d~~g-~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (208)
                      .+.  +++|+++|+.| +..+..++++++++|+++.+|....      ....+...++.+++++.++....     ...+
T Consensus       224 ~~~--~~~d~vi~~~g~~~~~~~~~~~l~~~G~~v~~g~~~~------~~~~~~~~~~~~~~~i~~~~~~~-----~~~~  290 (333)
T cd08296         224 QEL--GGAKLILATAPNAKAISALVGGLAPRGKLLILGAAGE------PVAVSPLQLIMGRKSIHGWPSGT-----ALDS  290 (333)
T ss_pred             Hhc--CCCCEEEECCCchHHHHHHHHHcccCCEEEEEecCCC------CCCcCHHHHhhcccEEEEeCcCC-----HHHH
Confidence            655  36999999987 6788999999999999999988541      12344556678899999877433     4567


Q ss_pred             HHHHHHHHCCCceeeeeeeecCCcHHHHHHHHhcCCccceEEEE
Q 028523          161 EMMIPRIKEGKIVYVEDKAEGLESAPAALVGLFSGRNVGKQVVE  204 (208)
Q Consensus       161 ~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~  204 (208)
                      ..+++++.++.+++.+ .+++++++.+|++.+.+++..||+|++
T Consensus       291 ~~~~~~~~~~~l~~~v-~~~~~~~~~~a~~~~~~~~~~gk~v~~  333 (333)
T cd08296         291 EDTLKFSALHGVRPMV-ETFPLEKANEAYDRMMSGKARFRVVLT  333 (333)
T ss_pred             HHHHHHHHhCCCCceE-EEEEHHHHHHHHHHHHCCCCceeEEeC
Confidence            7788888899888765 579999999999999999999999874

Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catal

>cd08231 MDR_TM0436_like Hypothetical enzyme TM0436 resembles the zinc-dependent alcohol dehydrogenases (ADH)

Probab=99.93  E-value=7.4e-24  Score=166.00  Aligned_cols=191  Identities=21%  Similarity=0.232  Sum_probs=152.4

Q ss_pred             chhhHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHhcCCCeeEecCCCcc---H
Q 028523            2 PGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGC-YVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPD---L   77 (208)
Q Consensus         2 ~~~tA~~~l~~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g~-~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~---~   77 (208)
                      +++|||+++......++|++|||+| +|++|++++|+|+.+|+ +|+++++++++.+.++ ++|++.++++++. +   +
T Consensus       161 ~~~ta~~al~~~~~~~~g~~vlI~g-~g~vG~~~~~lak~~G~~~v~~~~~~~~~~~~~~-~~g~~~vi~~~~~-~~~~~  237 (361)
T cd08231         161 ALATVLAALDRAGPVGAGDTVVVQG-AGPLGLYAVAAAKLAGARRVIVIDGSPERLELAR-EFGADATIDIDEL-PDPQR  237 (361)
T ss_pred             HHHHHHHHHHhccCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHH-HcCCCeEEcCccc-ccHHH
Confidence            5789999998777777999999997 59999999999999999 9999999999999998 8999988887754 3   2


Q ss_pred             HHHHHhHCCC-CccEEEeCCCc-hhHHHHHHhhccCCEEEEEecccccCCCCCCCccchHHHhhcceeEEEeeccccccc
Q 028523           78 DAALKRYFPE-GINIYFENVGG-KMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCLISKRIRMEGFLVPDYFHL  155 (208)
Q Consensus        78 ~~~~~~~~~~-~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  155 (208)
                      ...+.+.+++ ++|++|||+|+ ..+..++++++++|+++.+|.....    .........++.+++++.++....    
T Consensus       238 ~~~i~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~----  309 (361)
T cd08231         238 RAIVRDITGGRGADVVIEASGHPAAVPEGLELLRRGGTYVLVGSVAPA----GTVPLDPERIVRKNLTIIGVHNYD----  309 (361)
T ss_pred             HHHHHHHhCCCCCcEEEECCCChHHHHHHHHHhccCCEEEEEcCCCCC----CccccCHHHHhhcccEEEEcccCC----
Confidence            3467777776 89999999985 6788999999999999999875421    112233445677888888877543    


Q ss_pred             hHHHHHHHHHHHHCC----CceeeeeeeecCCcHHHHHHHHhcCCccceEEEEe
Q 028523          156 YPKFLEMMIPRIKEG----KIVYVEDKAEGLESAPAALVGLFSGRNVGKQVVEV  205 (208)
Q Consensus       156 ~~~~~~~~~~~~~~g----~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~  205 (208)
                       .+.++++++++.++    .+.+.++++|+++++.+|++.+.++.. +|+||.+
T Consensus       310 -~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~a~~~~~~~~~-~k~vi~~  361 (361)
T cd08231         310 -PSHLYRAVRFLERTQDRFPFAELVTHRYPLEDINEALELAESGTA-LKVVIDP  361 (361)
T ss_pred             -chhHHHHHHHHHhccCcCCchhheeeeeeHHHHHHHHHHHHcCCc-eEEEeCC
Confidence             33466677777766    344567888999999999999988774 7999863

This group contains the hypothetical TM0436 alcohol dehydrogenase from Thermotoga maritima, proteins annotated as 5-exo-alcohol dehydrogenase, and other members of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. MDR, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quino

>cd08250 Mgc45594_like Mgc45594 gene product and other MDR family members

Probab=99.92  E-value=3.4e-23  Score=160.28  Aligned_cols=201  Identities=40%  Similarity=0.711  Sum_probs=161.6

Q ss_pred             chhhHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHHH
Q 028523            2 PGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAAL   81 (208)
Q Consensus         2 ~~~tA~~~l~~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~~   81 (208)
                      ++.|||+++.+.+++.+|++++|+|++|++|++++|+++..|++|+++++++++.+.++ ++|++.++++.+. ++...+
T Consensus       123 ~~~ta~~~l~~~~~~~~~~~vlI~ga~g~ig~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~g~~~v~~~~~~-~~~~~~  200 (329)
T cd08250         123 SGLTASIALEEVGEMKSGETVLVTAAAGGTGQFAVQLAKLAGCHVIGTCSSDEKAEFLK-SLGCDRPINYKTE-DLGEVL  200 (329)
T ss_pred             HHHHHHHHHHHhcCCCCCCEEEEEeCccHHHHHHHHHHHHcCCeEEEEeCcHHHHHHHH-HcCCceEEeCCCc-cHHHHH
Confidence            56899999988889999999999999999999999999999999999999999999998 8999888887765 666666


Q ss_pred             HhHCCCCccEEEeCCCchhHHHHHHhhccCCEEEEEecccccCCCC-C---CCccchHHHhhcceeEEEeeccccccchH
Q 028523           82 KRYFPEGINIYFENVGGKMLDAVLLNMRIQGRITLCGMISQYNNDK-P---EGVHNLTCLISKRIRMEGFLVPDYFHLYP  157 (208)
Q Consensus        82 ~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~-~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  157 (208)
                      .+..++++|++||+.|+..+..++++++++|+++.+|......... .   .........+.+++++.++....+.....
T Consensus       201 ~~~~~~~vd~v~~~~g~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  280 (329)
T cd08250         201 KKEYPKGVDVVYESVGGEMFDTCVDNLALKGRLIVIGFISGYQSGTGPSPVKGATLPPKLLAKSASVRGFFLPHYAKLIP  280 (329)
T ss_pred             HHhcCCCCeEEEECCcHHHHHHHHHHhccCCeEEEEecccCCcccCcccccccccccHHHhhcCceEEEEEhHHHHHHHH
Confidence            6655558999999999989999999999999999998764321000 0   00111234567888888887654433345


Q ss_pred             HHHHHHHHHHHCCCceeee--eeeecCCcHHHHHHHHhcCCccceEEEE
Q 028523          158 KFLEMMIPRIKEGKIVYVE--DKAEGLESAPAALVGLFSGRNVGKQVVE  204 (208)
Q Consensus       158 ~~~~~~~~~~~~g~~~~~~--~~~~~~~~~~~a~~~~~~~~~~gk~vv~  204 (208)
                      +.+.++++++.++.+.+.+  ...++++++.+|++.+.++...+|+|++
T Consensus       281 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~kvvv~  329 (329)
T cd08250         281 QHLDRLLQLYQRGKLVCEVDPTRFRGLESVADAVDYLYSGKNIGKVVVE  329 (329)
T ss_pred             HHHHHHHHHHHCCCeeeeECCccccCHHHHHHHHHHHHcCCCCceEEeC
Confidence            6788899999999998743  3568999999999999998888899874

Includes Human Mgc45594 gene product of undetermined function. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.

>cd08274 MDR9 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=99.92  E-value=2.1e-23  Score=162.71  Aligned_cols=188  Identities=27%  Similarity=0.319  Sum_probs=153.5

Q ss_pred             chhhHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHHH
Q 028523            2 PGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAAL   81 (208)
Q Consensus         2 ~~~tA~~~l~~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~~   81 (208)
                      +++|||+++ ..+++++|++++|+|++|++|++++|+|+.+|++++++++++ +.+.++ ++|++.+++..+. ...+  
T Consensus       162 ~~~ta~~~~-~~~~~~~g~~vlI~g~~g~ig~~~~~~a~~~g~~vi~~~~~~-~~~~~~-~~g~~~~~~~~~~-~~~~--  235 (350)
T cd08274         162 SYSTAENML-ERAGVGAGETVLVTGASGGVGSALVQLAKRRGAIVIAVAGAA-KEEAVR-ALGADTVILRDAP-LLAD--  235 (350)
T ss_pred             HHHHHHHHH-hhcCCCCCCEEEEEcCCcHHHHHHHHHHHhcCCEEEEEeCch-hhHHHH-hcCCeEEEeCCCc-cHHH--
Confidence            567899998 678899999999999999999999999999999999998665 788887 8998765554433 4443  


Q ss_pred             HhHCCC-CccEEEeCCCchhHHHHHHhhccCCEEEEEecccccCCCCCCCccchHHHhhcceeEEEeeccccccchHHHH
Q 028523           82 KRYFPE-GINIYFENVGGKMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCLISKRIRMEGFLVPDYFHLYPKFL  160 (208)
Q Consensus        82 ~~~~~~-~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (208)
                      ...+.+ ++|++||++|++.+..++++++++|+++.+|....     .....+...++.+++++.++....     .+.+
T Consensus       236 ~~~~~~~~~d~vi~~~g~~~~~~~~~~l~~~G~~v~~g~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~  305 (350)
T cd08274         236 AKALGGEPVDVVADVVGGPLFPDLLRLLRPGGRYVTAGAIAG-----PVVELDLRTLYLKDLTLFGSTLGT-----REVF  305 (350)
T ss_pred             HHhhCCCCCcEEEecCCHHHHHHHHHHhccCCEEEEecccCC-----ccccCCHHHhhhcceEEEEeecCC-----HHHH
Confidence            344444 89999999999899999999999999999986432     112344556677888888877643     5678


Q ss_pred             HHHHHHHHCCCceeeeeeeecCCcHHHHHHHHhcCCccceEEEEe
Q 028523          161 EMMIPRIKEGKIVYVEDKAEGLESAPAALVGLFSGRNVGKQVVEV  205 (208)
Q Consensus       161 ~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~  205 (208)
                      .++++++.++.+.+.+.++++++++.++++.+.++...+|+|+.+
T Consensus       306 ~~~~~l~~~~~l~~~~~~~~~~~~~~~a~~~~~~~~~~~kvvi~~  350 (350)
T cd08274         306 RRLVRYIEEGEIRPVVAKTFPLSEIREAQAEFLEKRHVGKLVLVP  350 (350)
T ss_pred             HHHHHHHHCCCcccccccccCHHHHHHHHHHHhcCCCceEEEEeC
Confidence            889999999999887778899999999999999888889999864

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>PTZ00354 alcohol dehydrogenase; Provisional

Probab=99.92  E-value=2.7e-23  Score=160.99  Aligned_cols=200  Identities=25%  Similarity=0.347  Sum_probs=162.6

Q ss_pred             chhhHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeEecCCCcc-HHHH
Q 028523            2 PGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPD-LDAA   80 (208)
Q Consensus         2 ~~~tA~~~l~~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~-~~~~   80 (208)
                      ++.|||+++.+.+.+.+|++|+|+|++|++|++++|+++..|++++++++++++.+.++ ++|.+.++++.+. + +..+
T Consensus       124 ~~~ta~~~l~~~~~~~~~~~vlI~ga~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~g~~~~~~~~~~-~~~~~~  201 (334)
T PTZ00354        124 AFLTAWQLLKKHGDVKKGQSVLIHAGASGVGTAAAQLAEKYGAATIITTSSEEKVDFCK-KLAAIILIRYPDE-EGFAPK  201 (334)
T ss_pred             HHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-HcCCcEEEecCCh-hHHHHH
Confidence            46789999988889999999999999999999999999999999888998999999998 8999888887765 4 6777


Q ss_pred             HHhHCCC-CccEEEeCCCchhHHHHHHhhccCCEEEEEecccccCCCCCCCccchHHHhhcceeEEEeecccc-----cc
Q 028523           81 LKRYFPE-GINIYFENVGGKMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCLISKRIRMEGFLVPDY-----FH  154 (208)
Q Consensus        81 ~~~~~~~-~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~  154 (208)
                      +.+.+++ ++|++||+.+++.+..++++++++|+++.++...+.+    ....+....+.++.++.+......     +.
T Consensus       202 ~~~~~~~~~~d~~i~~~~~~~~~~~~~~l~~~g~~i~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  277 (334)
T PTZ00354        202 VKKLTGEKGVNLVLDCVGGSYLSETAEVLAVDGKWIVYGFMGGAK----VEKFNLLPLLRKRASIIFSTLRSRSDEYKAD  277 (334)
T ss_pred             HHHHhCCCCceEEEECCchHHHHHHHHHhccCCeEEEEecCCCCc----ccccCHHHHHhhCCEEEeeeccccchhhhHH
Confidence            7777765 8999999999899999999999999999998643211    111334445566667777654432     12


Q ss_pred             chHHHHHHHHHHHHCCCceeeeeeeecCCcHHHHHHHHhcCCccceEEEEecC
Q 028523          155 LYPKFLEMMIPRIKEGKIVYVEDKAEGLESAPAALVGLFSGRNVGKQVVEVAT  207 (208)
Q Consensus       155 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~~~  207 (208)
                      ...+.+..+.+++.++.+.+.+.+.++++++.++++.+.++...+|+|+.+.+
T Consensus       278 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~kvvv~~~~  330 (334)
T PTZ00354        278 LVASFEREVLPYMEEGEIKPIVDRTYPLEEVAEAHTFLEQNKNIGKVVLTVNE  330 (334)
T ss_pred             HHHHHHHHHHHHHHCCCccCccccEEcHHHHHHHHHHHHhCCCCceEEEecCC
Confidence            22355677889999999988777889999999999999988888999998764

>TIGR01751 crot-CoA-red crotonyl-CoA reductase

Probab=99.92  E-value=3.6e-23  Score=163.98  Aligned_cols=195  Identities=20%  Similarity=0.269  Sum_probs=157.7

Q ss_pred             chhhHHHHHHH--hcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeEecCCCc----
Q 028523            2 PGMTAYAGFFE--VCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEP----   75 (208)
Q Consensus         2 ~~~tA~~~l~~--~~~~~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~----   75 (208)
                      +++|||+++..  .+++.+|++++|+|++|++|++++|+++.+|++++++++++++.+.++ ++|++.++|+++.+    
T Consensus       171 ~~~ta~~al~~~~~~~~~~g~~vlV~Ga~g~vG~~ai~~ak~~G~~vi~~~~~~~~~~~~~-~~g~~~~v~~~~~~~~~~  249 (398)
T TIGR01751       171 TGATAYRQLVGWNPATVKPGDNVLIWGAAGGLGSYATQLARAGGGNPVAVVSSPEKAEYCR-ELGAEAVIDRNDFGHWGR  249 (398)
T ss_pred             hHHHHHHHHhhhhccCCCCCCEEEEEcCCcHHHHHHHHHHHHcCCeEEEEcCCHHHHHHHH-HcCCCEEecCCCcchhhc
Confidence            56889999865  477899999999999999999999999999999999888999999999 79999988875420    


Q ss_pred             -----------------cHHHHHHhHCCC-CccEEEeCCCchhHHHHHHhhccCCEEEEEecccccCCCCCCCccchHHH
Q 028523           76 -----------------DLDAALKRYFPE-GINIYFENVGGKMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCL  137 (208)
Q Consensus        76 -----------------~~~~~~~~~~~~-~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~  137 (208)
                                       .+...+.+.+++ ++|++|||+|...+..++++++++|+++.+|.....+     ...+....
T Consensus       250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~d~vld~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~-----~~~~~~~~  324 (398)
T TIGR01751       250 LPDLNTQAPKEWTKSFKRFGKRIRELTGGEDPDIVFEHPGRATFPTSVFVCRRGGMVVICGGTTGYN-----HDYDNRYL  324 (398)
T ss_pred             cccccccccchhhhcchhHHHHHHHHcCCCCceEEEECCcHHHHHHHHHhhccCCEEEEEccccCCC-----CCcCHHHH
Confidence                             134456666665 8999999999888899999999999999998765311     12334445


Q ss_pred             hhcceeEEEeeccccccchHHHHHHHHHHHHCCCceeeeeeeecCCcHHHHHHHHhcCCccceEEEEecC
Q 028523          138 ISKRIRMEGFLVPDYFHLYPKFLEMMIPRIKEGKIVYVEDKAEGLESAPAALVGLFSGRNVGKQVVEVAT  207 (208)
Q Consensus       138 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~~~  207 (208)
                      +.++.++.+.....     .+.+.++++++.++.+.+.+.+++++++++++++.+.++...||+|+++..
T Consensus       325 ~~~~~~~~~~~~~~-----~~~~~~~~~~l~~~~l~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvv~~~~  389 (398)
T TIGR01751       325 WMRQKRIQGSHFAN-----LREAWEANRLVAKGRIDPTLSKVYPLEEIGQAHQDVHRNHHQGNVAVLVLA  389 (398)
T ss_pred             hhcccEEEccccCc-----HHHHHHHHHHHHCCCcccceeeEEcHHHHHHHHHHHHcCCCCceEEEEeCC
Confidence            55666666655433     234678889999999998888899999999999999999989999998864

The enzyme modelled by this alignment is responsible for the conversion of crotonyl-CoA reductase to butyryl-CoA. In serine cycle methylotrophic bacteria this enzyme is involved in the process of acetyl-CoA to glyoxylate. In other bacteria the enzyme is used to produce butyrate for incorporation into polyketides such as tylosin from Streptomyces fradiae and coronatine from Pseudomonas syringae.

>cd08290 ETR 2-enoyl thioester reductase (ETR)

Probab=99.92  E-value=2.7e-23  Score=161.61  Aligned_cols=198  Identities=26%  Similarity=0.278  Sum_probs=160.7

Q ss_pred             chhhHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCH----HHHHHHHHhcCCCeeEecCCC--c
Q 028523            2 PGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSK----DKVDLLKNKFGFDEAFNYKEE--P   75 (208)
Q Consensus         2 ~~~tA~~~l~~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~----~~~~~~~~~~g~~~v~~~~~~--~   75 (208)
                      +++|||+++...+.+++|++|||+|++|++|++++|+|++.|++++++++++    ++.+.++ ++|++.++++++.  .
T Consensus       130 ~~~ta~~~l~~~~~~~~g~~vlI~g~~g~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~  208 (341)
T cd08290         130 NPCTAYRLLEDFVKLQPGDWVIQNGANSAVGQAVIQLAKLLGIKTINVVRDRPDLEELKERLK-ALGADHVLTEEELRSL  208 (341)
T ss_pred             cHHHHHHHHHhhcccCCCCEEEEccchhHHHHHHHHHHHHcCCeEEEEEcCCCcchhHHHHHH-hcCCCEEEeCcccccc
Confidence            5689999998888899999999999999999999999999999999999776    5678887 8999998887652  0


Q ss_pred             cHHHHHHhHCCCCccEEEeCCCchhHHHHHHhhccCCEEEEEecccccCCCCCCCccchHHHhhcceeEEEeecccc---
Q 028523           76 DLDAALKRYFPEGINIYFENVGGKMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCLISKRIRMEGFLVPDY---  152 (208)
Q Consensus        76 ~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---  152 (208)
                      ++...+....++++|+++||+|+..+...+++++++|+++.+|....     ..........+.+++++.+......   
T Consensus       209 ~~~~~i~~~~~~~~d~vld~~g~~~~~~~~~~l~~~G~~v~~g~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~  283 (341)
T cd08290         209 LATELLKSAPGGRPKLALNCVGGKSATELARLLSPGGTMVTYGGMSG-----QPVTVPTSLLIFKDITLRGFWLTRWLKR  283 (341)
T ss_pred             cHHHHHHHHcCCCceEEEECcCcHhHHHHHHHhCCCCEEEEEeccCC-----CCcccCHHHHhhCCceEEEEecHHHHhh
Confidence            45566666655479999999998888889999999999999986442     1122344456788999988776432   


Q ss_pred             --ccchHHHHHHHHHHHHCCCceeeeeeee---cCCcHHHHHHHHhcCCccceEEEEe
Q 028523          153 --FHLYPKFLEMMIPRIKEGKIVYVEDKAE---GLESAPAALVGLFSGRNVGKQVVEV  205 (208)
Q Consensus       153 --~~~~~~~~~~~~~~~~~g~~~~~~~~~~---~~~~~~~a~~~~~~~~~~gk~vv~~  205 (208)
                        +......+.++++++.+|.+.+....++   +++++.++++.+.++...+|+|+++
T Consensus       284 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~k~v~~~  341 (341)
T cd08290         284 ANPEEKEDMLEELAELIREGKLKAPPVEKVTDDPLEEFKDALANALKGGGGGKQVLVM  341 (341)
T ss_pred             cCHHHHHHHHHHHHHHHHcCCccCCcccccccCCHHHHHHHHHHHhhcCCCCeEEEeC
Confidence              2233457888999999999988766677   9999999999999988889999874

2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann f

>cd05286 QOR2 Quinone oxidoreductase (QOR)

Probab=99.92  E-value=5.1e-23  Score=158.08  Aligned_cols=197  Identities=26%  Similarity=0.349  Sum_probs=162.4

Q ss_pred             chhhHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHHH
Q 028523            2 PGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAAL   81 (208)
Q Consensus         2 ~~~tA~~~l~~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~~   81 (208)
                      .+++||+++.+.+++.+|++|+|+|++|++|++++++++.+|++|+++++++++.+.++ ++|++.++++.+. .+...+
T Consensus       120 ~~~~a~~~l~~~~~~~~g~~vlI~g~~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~g~~~~~~~~~~-~~~~~~  197 (320)
T cd05286         120 QGLTAHYLLRETYPVKPGDTVLVHAAAGGVGLLLTQWAKALGATVIGTVSSEEKAELAR-AAGADHVINYRDE-DFVERV  197 (320)
T ss_pred             hHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHH-HCCCCEEEeCCch-hHHHHH
Confidence            46788999988889999999999999999999999999999999999999999999997 8999888887765 677778


Q ss_pred             HhHCCC-CccEEEeCCCchhHHHHHHhhccCCEEEEEecccccCCCCCCCccchHHHhhcceeEEEeecccc---ccchH
Q 028523           82 KRYFPE-GINIYFENVGGKMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCLISKRIRMEGFLVPDY---FHLYP  157 (208)
Q Consensus        82 ~~~~~~-~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~  157 (208)
                      ...+.+ ++|.+++|.++.....++++++++|+++.+|....     ..........+.+++++.+.....+   +....
T Consensus       198 ~~~~~~~~~d~vl~~~~~~~~~~~~~~l~~~g~~v~~g~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  272 (320)
T cd05286         198 REITGGRGVDVVYDGVGKDTFEGSLDSLRPRGTLVSFGNASG-----PVPPFDLLRLSKGSLFLTRPSLFHYIATREELL  272 (320)
T ss_pred             HHHcCCCCeeEEEECCCcHhHHHHHHhhccCcEEEEEecCCC-----CCCccCHHHHHhcCcEEEEEehhhhcCCHHHHH
Confidence            777766 89999999998888999999999999999987542     1112233333477888776554333   33345


Q ss_pred             HHHHHHHHHHHCCCceeeeeeeecCCcHHHHHHHHhcCCccceEEEEe
Q 028523          158 KFLEMMIPRIKEGKIVYVEDKAEGLESAPAALVGLFSGRNVGKQVVEV  205 (208)
Q Consensus       158 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~  205 (208)
                      +.+.++++++.++.+.+...+.++++++.++++.+.++...+|+++++
T Consensus       273 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~~~~~~~~~~~vv~~~  320 (320)
T cd05286         273 ARAAELFDAVASGKLKVEIGKRYPLADAAQAHRDLESRKTTGKLLLIP  320 (320)
T ss_pred             HHHHHHHHHHHCCCCcCcccceEcHHHHHHHHHHHHcCCCCceEEEeC
Confidence            667889999999998877778899999999999999988889999864

Quinone oxidoreductase (QOR) and 2-haloacrylate reductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. 2-haloacrylate reductase, a member of this subgroup, catalyzes the NADPH-dependent reduction of a carbon-carbon double bond in organohalogen compounds. Although similar to QOR, Burkholderia 2-haloacrylate reductase does not act on the quinones 1,4-benzoquinone

>cd08263 Zn_ADH10 Alcohol dehydrogenases of the MDR family

Probab=99.92  E-value=4.3e-23  Score=161.97  Aligned_cols=192  Identities=24%  Similarity=0.289  Sum_probs=158.5

Q ss_pred             chhhHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCE-EEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHH
Q 028523            2 PGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCY-VVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAA   80 (208)
Q Consensus         2 ~~~tA~~~l~~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g~~-v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~   80 (208)
                      +++|||+++.+.+.+.++++|+|+| +|++|++++|+|+..|++ +++++.++++.+.++ ++|++.++++++. ++..+
T Consensus       171 ~~~tA~~~l~~~~~~~~g~~VlI~g-~g~vG~~~~~lak~~G~~~vi~~~~s~~~~~~~~-~~g~~~v~~~~~~-~~~~~  247 (367)
T cd08263         171 AGFTAYGALKHAADVRPGETVAVIG-VGGVGSSAIQLAKAFGASPIIAVDVRDEKLAKAK-ELGATHTVNAAKE-DAVAA  247 (367)
T ss_pred             hHHHHHHHHHhcccCCCCCEEEEEC-CcHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHH-HhCCceEecCCcc-cHHHH
Confidence            5789999998888889999999996 699999999999999997 998988999999888 8999999998876 77778


Q ss_pred             HHhHCCC-CccEEEeCCCch-hHHHHHHhhccCCEEEEEecccccCCCCCCCccchHHHhhcceeEEEeeccccccchHH
Q 028523           81 LKRYFPE-GINIYFENVGGK-MLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCLISKRIRMEGFLVPDYFHLYPK  158 (208)
Q Consensus        81 ~~~~~~~-~~d~v~d~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  158 (208)
                      +++..++ ++|+++|++++. ....++++|+++|+++.++.....    .....+...++.+++++.++....    ..+
T Consensus       248 l~~~~~~~~~d~vld~vg~~~~~~~~~~~l~~~G~~v~~g~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~----~~~  319 (367)
T cd08263         248 IREITGGRGVDVVVEALGKPETFKLALDVVRDGGRAVVVGLAPGG----ATAEIPITRLVRRGIKIIGSYGAR----PRQ  319 (367)
T ss_pred             HHHHhCCCCCCEEEEeCCCHHHHHHHHHHHhcCCEEEEEccCCCC----CccccCHHHHhhCCeEEEecCCCC----cHH
Confidence            8777665 899999999986 889999999999999999865421    112234444446788877743221    146


Q ss_pred             HHHHHHHHHHCCCceee--eeeeecCCcHHHHHHHHhcCCccceEEEE
Q 028523          159 FLEMMIPRIKEGKIVYV--EDKAEGLESAPAALVGLFSGRNVGKQVVE  204 (208)
Q Consensus       159 ~~~~~~~~~~~g~~~~~--~~~~~~~~~~~~a~~~~~~~~~~gk~vv~  204 (208)
                      .+++++++++++.+.+.  +++.++++++.++++.+.++...||+||+
T Consensus       320 ~~~~~~~ll~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~g~~~~~  367 (367)
T cd08263         320 DLPELVGLAASGKLDPEALVTHKYKLEEINEAYENLRKGLIHGRAIVE  367 (367)
T ss_pred             HHHHHHHHHHcCCCCcccceeEEecHHHHHHHHHHHhcCCccceeeeC
Confidence            78889999999998864  56789999999999999999988999984

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subu

>cd08297 CAD3 Cinnamyl alcohol dehydrogenases (CAD)

Probab=99.92  E-value=7.7e-23  Score=159.06  Aligned_cols=190  Identities=23%  Similarity=0.294  Sum_probs=158.8

Q ss_pred             chhhHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHHH
Q 028523            2 PGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAAL   81 (208)
Q Consensus         2 ~~~tA~~~l~~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~~   81 (208)
                      +++|||+++.. .++++++++||+|+++++|++++|+|+++|++|+++++++++.+.++ ++|++.++++++. ++...+
T Consensus       150 ~~~ta~~~~~~-~~~~~~~~vlV~g~~~~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~g~~~v~~~~~~-~~~~~~  226 (341)
T cd08297         150 AGVTVYKALKK-AGLKPGDWVVISGAGGGLGHLGVQYAKAMGLRVIAIDVGDEKLELAK-ELGADAFVDFKKS-DDVEAV  226 (341)
T ss_pred             chHHHHHHHHh-cCCCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHH-HcCCcEEEcCCCc-cHHHHH
Confidence            46899999866 58999999999999888999999999999999999999999999997 8999999988876 777888


Q ss_pred             HhHCCC-CccEEEeCCC-chhHHHHHHhhccCCEEEEEecccccCCCCCCCccchHHHhhcceeEEEeeccccccchHHH
Q 028523           82 KRYFPE-GINIYFENVG-GKMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCLISKRIRMEGFLVPDYFHLYPKF  159 (208)
Q Consensus        82 ~~~~~~-~~d~v~d~~g-~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (208)
                      .+..++ ++|+++|+.+ +..+..++++++++|+++.+|....     .....+......+++++.+.....     .+.
T Consensus       227 ~~~~~~~~vd~vl~~~~~~~~~~~~~~~l~~~g~~v~~g~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~-----~~~  296 (341)
T cd08297         227 KELTGGGGAHAVVVTAVSAAAYEQALDYLRPGGTLVCVGLPPG-----GFIPLDPFDLVLRGITIVGSLVGT-----RQD  296 (341)
T ss_pred             HHHhcCCCCCEEEEcCCchHHHHHHHHHhhcCCEEEEecCCCC-----CCCCCCHHHHHhcccEEEEeccCC-----HHH
Confidence            877765 8999999766 6788999999999999999986542     112234455557788887754432     567


Q ss_pred             HHHHHHHHHCCCceeeeeeeecCCcHHHHHHHHhcCCccceEEEEe
Q 028523          160 LEMMIPRIKEGKIVYVEDKAEGLESAPAALVGLFSGRNVGKQVVEV  205 (208)
Q Consensus       160 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~  205 (208)
                      ++++++++.++.+.+.+ ..+++++++++++.+..+...||+++++
T Consensus       297 ~~~~~~~~~~~~l~~~~-~~~~~~~~~~a~~~~~~~~~~gkvvi~~  341 (341)
T cd08297         297 LQEALEFAARGKVKPHI-QVVPLEDLNEVFEKMEEGKIAGRVVVDF  341 (341)
T ss_pred             HHHHHHHHHcCCCccee-EEEcHHHHHHHHHHHHcCCccceEEEeC
Confidence            88899999999998755 5789999999999999999899999875

These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short cha

>cd08240 6_hydroxyhexanoate_dh_like 6-hydroxyhexanoate dehydrogenase

Probab=99.92  E-value=7e-23  Score=159.84  Aligned_cols=189  Identities=20%  Similarity=0.259  Sum_probs=156.1

Q ss_pred             chhhHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHH
Q 028523            2 PGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGC-YVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAA   80 (208)
Q Consensus         2 ~~~tA~~~l~~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g~-~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~   80 (208)
                      +++|||+++.+...+.++++|+|+| +|++|++++|+|+..|+ +|+++++++++.+.++ ++|++.++++++. .+.+.
T Consensus       159 ~~~tA~~~~~~~~~~~~~~~vlI~g-~g~vg~~~~~~a~~~G~~~v~~~~~~~~~~~~~~-~~g~~~~~~~~~~-~~~~~  235 (350)
T cd08240         159 SGLTAYSAVKKLMPLVADEPVVIIG-AGGLGLMALALLKALGPANIIVVDIDEAKLEAAK-AAGADVVVNGSDP-DAAKR  235 (350)
T ss_pred             hhhhHHHHHHhcccCCCCCEEEEEC-CcHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHH-HhCCcEEecCCCc-cHHHH
Confidence            5789999998877777899999996 69999999999999999 7999998999999997 8999888888776 66667


Q ss_pred             HHhHCCCCccEEEeCCC-chhHHHHHHhhccCCEEEEEecccccCCCCCCCccchHHHhhcceeEEEeeccccccchHHH
Q 028523           81 LKRYFPEGINIYFENVG-GKMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCLISKRIRMEGFLVPDYFHLYPKF  159 (208)
Q Consensus        81 ~~~~~~~~~d~v~d~~g-~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (208)
                      +.+..++++|++||++| ...+..++++|+++|+++.+|.....      ...+......+++++.+.....     .+.
T Consensus       236 ~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~g~~v~~g~~~~~------~~~~~~~~~~~~~~i~~~~~~~-----~~~  304 (350)
T cd08240         236 IIKAAGGGVDAVIDFVNNSATASLAFDILAKGGKLVLVGLFGGE------ATLPLPLLPLRALTIQGSYVGS-----LEE  304 (350)
T ss_pred             HHHHhCCCCcEEEECCCCHHHHHHHHHHhhcCCeEEEECCCCCC------CcccHHHHhhcCcEEEEcccCC-----HHH
Confidence            77665558999999998 57899999999999999999875421      1122233344777777766543     366


Q ss_pred             HHHHHHHHHCCCceeeeeeeecCCcHHHHHHHHhcCCccceEEEE
Q 028523          160 LEMMIPRIKEGKIVYVEDKAEGLESAPAALVGLFSGRNVGKQVVE  204 (208)
Q Consensus       160 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~  204 (208)
                      +.+++++++++.+++.....++++++.++++.+.+++..+|++++
T Consensus       305 ~~~~~~ll~~~~i~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~  349 (350)
T cd08240         305 LRELVALAKAGKLKPIPLTERPLSDVNDALDDLKAGKVVGRAVLK  349 (350)
T ss_pred             HHHHHHHHHcCCCccceeeEEcHHHHHHHHHHHHcCCccceEEec
Confidence            888999999999987777789999999999999999888999985

6-hydroxyhexanoate dehydrogenase, an enzyme of the zinc-dependent alcohol dehydrogenase-like family of medium chain dehydrogenases/reductases catalyzes the conversion of 6-hydroxyhexanoate and NAD(+) to 6-oxohexanoate + NADH and H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzy

>cd08243 quinone_oxidoreductase_like_1 Quinone oxidoreductase (QOR)

Probab=99.92  E-value=7.3e-23  Score=157.57  Aligned_cols=194  Identities=21%  Similarity=0.254  Sum_probs=154.7

Q ss_pred             chhhHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHHH
Q 028523            2 PGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAAL   81 (208)
Q Consensus         2 ~~~tA~~~l~~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~~   81 (208)
                      +++|||+++...+.+.+|++|+|+|++|++|++++|+|++.|++|+++++++++.+.++ ++|++.+++. .. ++.+.+
T Consensus       126 ~~~ta~~~l~~~~~~~~g~~vlV~ga~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~g~~~~~~~-~~-~~~~~i  202 (320)
T cd08243         126 TYYTAWGSLFRSLGLQPGDTLLIRGGTSSVGLAALKLAKALGATVTATTRSPERAALLK-ELGADEVVID-DG-AIAEQL  202 (320)
T ss_pred             HHHHHHHHHHHhcCCCCCCEEEEEcCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-hcCCcEEEec-Cc-cHHHHH
Confidence            57899999988888999999999999999999999999999999999999999999998 8999887754 33 666777


Q ss_pred             HhHCCCCccEEEeCCCchhHHHHHHhhccCCEEEEEecccccCCCCCCCccchHHHhhcceeEEEeeccccccchHHHHH
Q 028523           82 KRYFPEGINIYFENVGGKMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCLISKRIRMEGFLVPDYFHLYPKFLE  161 (208)
Q Consensus        82 ~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  161 (208)
                      .+. +.++|+++|++++..+..++++++++|+++.+|...+.... ..........+.+++++.+......   ....++
T Consensus       203 ~~~-~~~~d~vl~~~~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~  277 (320)
T cd08243         203 RAA-PGGFDKVLELVGTATLKDSLRHLRPGGIVCMTGLLGGQWTL-EDFNPMDDIPSGVNLTLTGSSSGDV---PQTPLQ  277 (320)
T ss_pred             HHh-CCCceEEEECCChHHHHHHHHHhccCCEEEEEccCCCCccc-CCcchhhhhhhccceEEEecchhhh---hHHHHH
Confidence            777 45899999999998899999999999999999875321100 0000111112356677666654321   245688


Q ss_pred             HHHHHHHCCCceeeeeeeecCCcHHHHHHHHhcCCccceEEE
Q 028523          162 MMIPRIKEGKIVYVEDKAEGLESAPAALVGLFSGRNVGKQVV  203 (208)
Q Consensus       162 ~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv  203 (208)
                      .+.+++.++.+++.+...++++++.+|++.+.++...+|+|+
T Consensus       278 ~~~~~~~~~~~~~~~~~~~~l~~~~~a~~~~~~~~~~~kvvv  319 (320)
T cd08243         278 ELFDFVAAGHLDIPPSKVFTFDEIVEAHAYMESNRAFGKVVV  319 (320)
T ss_pred             HHHHHHHCCceecccccEEcHHHHHHHHHHHHhCCCCCcEEe
Confidence            899999999998877788999999999999998888889886

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.

>COG1063 Tdh Threonine dehydrogenase and related Zn-dependent dehydrogenases [Amino acid transport and metabolism / General function prediction only]

Probab=99.92  E-value=4.3e-23  Score=160.26  Aligned_cols=193  Identities=26%  Similarity=0.310  Sum_probs=155.0

Q ss_pred             chhhHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHH
Q 028523            2 PGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGC-YVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAA   80 (208)
Q Consensus         2 ~~~tA~~~l~~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g~-~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~   80 (208)
                      ++.|+|++.......+++++|+|+|+ |++|++++++++..|+ +|++++.++++++.+++..|++.+++..+. +....
T Consensus       152 pla~~~~~~a~~~~~~~~~~V~V~Ga-GpIGLla~~~a~~~Ga~~Viv~d~~~~Rl~~A~~~~g~~~~~~~~~~-~~~~~  229 (350)
T COG1063         152 PLATAYHGHAERAAVRPGGTVVVVGA-GPIGLLAIALAKLLGASVVIVVDRSPERLELAKEAGGADVVVNPSED-DAGAE  229 (350)
T ss_pred             hhhhhhhhhhhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCceEEEeCCCHHHHHHHHHhCCCeEeecCccc-cHHHH
Confidence            45688777545555666669999995 9999999999999998 899999999999999933666666665554 56777


Q ss_pred             HHhHCCC-CccEEEeCCCc-hhHHHHHHhhccCCEEEEEecccccCCCCCCCccchHHHhhcceeEEEeeccccccchHH
Q 028523           81 LKRYFPE-GINIYFENVGG-KMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCLISKRIRMEGFLVPDYFHLYPK  158 (208)
Q Consensus        81 ~~~~~~~-~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  158 (208)
                      +.+.+.+ ++|++|||+|. ..+..++++++++|+++.+|......     ...+....+.+++++.|+....    ...
T Consensus       230 ~~~~t~g~g~D~vie~~G~~~~~~~ai~~~r~gG~v~~vGv~~~~~-----~~~~~~~~~~kel~l~gs~~~~----~~~  300 (350)
T COG1063         230 ILELTGGRGADVVIEAVGSPPALDQALEALRPGGTVVVVGVYGGED-----IPLPAGLVVSKELTLRGSLRPS----GRE  300 (350)
T ss_pred             HHHHhCCCCCCEEEECCCCHHHHHHHHHHhcCCCEEEEEeccCCcc-----CccCHHHHHhcccEEEeccCCC----Ccc
Confidence            8888888 99999999995 67899999999999999999976421     1355678889999999984322    145


Q ss_pred             HHHHHHHHHHCCCceee--eeeeecCCcHHHHHHHHhcCCc-cceEEEEe
Q 028523          159 FLEMMIPRIKEGKIVYV--EDKAEGLESAPAALVGLFSGRN-VGKQVVEV  205 (208)
Q Consensus       159 ~~~~~~~~~~~g~~~~~--~~~~~~~~~~~~a~~~~~~~~~-~gk~vv~~  205 (208)
                      .++.+++++++|++.+.  +++.++++++++|++.+.+.+. .-|+++.+
T Consensus       301 ~~~~~~~ll~~g~i~~~~lit~~~~~~~~~~a~~~~~~~~~~~~Kv~i~~  350 (350)
T COG1063         301 DFERALDLLASGKIDPEKLITHRLPLDDAAEAYELFADRKEEAIKVVLKP  350 (350)
T ss_pred             cHHHHHHHHHcCCCChhHceEeeccHHHHHHHHHHHHhcCCCeEEEEecC
Confidence            68899999999999864  5678899999999999998654 55888764

>TIGR02819 fdhA_non_GSH formaldehyde dehydrogenase, glutathione-independent

Probab=99.91  E-value=1.1e-22  Score=160.51  Aligned_cols=195  Identities=16%  Similarity=0.228  Sum_probs=145.1

Q ss_pred             chhhHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEE-EEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHH
Q 028523            2 PGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYV-VGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAA   80 (208)
Q Consensus         2 ~~~tA~~~l~~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g~~v-~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~   80 (208)
                      +++|||+++. .+++++|++|+|.| +|++|++++|+|+.+|+++ +++++++++.+.++ ++|++. +++...+++.+.
T Consensus       170 ~~~ta~~a~~-~~~~~~g~~VlV~G-~G~iG~~aiqlAk~~Ga~~vi~~d~~~~r~~~a~-~~Ga~~-v~~~~~~~~~~~  245 (393)
T TIGR02819       170 IFPTGYHGAV-TAGVGPGSTVYIAG-AGPVGLAAAASAQLLGAAVVIVGDLNPARLAQAR-SFGCET-VDLSKDATLPEQ  245 (393)
T ss_pred             HHHHHHHHHH-hcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCceEEEeCCCHHHHHHHH-HcCCeE-EecCCcccHHHH
Confidence            3678999984 57899999999966 5999999999999999964 44566788999999 899974 555432267777


Q ss_pred             HHhHCCC-CccEEEeCCCch---------------hHHHHHHhhccCCEEEEEecccc-cCCCC------CCCccchHHH
Q 028523           81 LKRYFPE-GINIYFENVGGK---------------MLDAVLLNMRIQGRITLCGMISQ-YNNDK------PEGVHNLTCL  137 (208)
Q Consensus        81 ~~~~~~~-~~d~v~d~~g~~---------------~~~~~~~~l~~~G~~v~~g~~~~-~~~~~------~~~~~~~~~~  137 (208)
                      +.+.+++ ++|++||++|.+               .+..++++++++|+++.+|.... .....      ....+.....
T Consensus       246 v~~~~~~~g~Dvvid~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~i~~~G~~~~~~~~~~~~~~~~~~~~i~~~~~  325 (393)
T TIGR02819       246 IEQILGEPEVDCAVDCVGFEARGHGHDGKKEAPATVLNSLMEVTRVGGAIGIPGLYVTEDPGAVDAAAKTGSLSIRFGLG  325 (393)
T ss_pred             HHHHcCCCCCcEEEECCCCccccccccccccchHHHHHHHHHHhhCCCEEEEeeecCCcccccccccccccccccchHHh
Confidence            8877776 899999999964               79999999999999999998631 11000      0112223344


Q ss_pred             hhcceeEEEeeccccccchHHHHHHHHHHHHCCCcee--eee-eeecCCcHHHHHHHHhcCCccceEEEEec
Q 028523          138 ISKRIRMEGFLVPDYFHLYPKFLEMMIPRIKEGKIVY--VED-KAEGLESAPAALVGLFSGRNVGKQVVEVA  206 (208)
Q Consensus       138 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~--~~~-~~~~~~~~~~a~~~~~~~~~~gk~vv~~~  206 (208)
                      +.+++++.+...     ...+++.++++++.+|++.+  .++ ++|+|+++++|++.+.+++. +|++|.++
T Consensus       326 ~~~~~~i~g~~~-----~~~~~~~~~~~~~~~g~i~~~~~i~~~~~~l~~~~~a~~~~~~~~~-~Kvvi~~~  391 (393)
T TIGR02819       326 WAKSHSFHTGQT-----PVMKYNRNLMQAILHDRVQIAKAVNVTVISLDDAPEGYAEFDAGAA-KKFVIDPH  391 (393)
T ss_pred             hccCceEEeccC-----ChhhhHHHHHHHHHcCCCCHHHceecceecHHHHHHHHHHHhhCCc-eEEEEeCC
Confidence            455556655221     11344578999999999875  345 78999999999999988754 89999874

Members of this family represent a distinct clade within the larger family of zinc-dependent dehydrogenases of medium chain alcohols, a family that also includes the so-called glutathione-dependent formaldehyde dehydrogenase. Members of this protein family have a tightly bound NAD that can act as a true cofactor, rather than a cosubstrate in dehydrogenase reactions, in dismutase reactions for some aldehydes. The name given to this family, however, is formaldehyde dehydrogenase, glutathione-independent.

>cd08289 MDR_yhfp_like Yhfp putative quinone oxidoreductases

Probab=99.91  E-value=8e-23  Score=157.96  Aligned_cols=196  Identities=23%  Similarity=0.340  Sum_probs=146.8

Q ss_pred             chhhHHHHHHHhc--C-CCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHH
Q 028523            2 PGMTAYAGFFEVC--S-PKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLD   78 (208)
Q Consensus         2 ~~~tA~~~l~~~~--~-~~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~   78 (208)
                      +++|||+++....  . ...+++|+|+|++|++|++++|+|+.+|++|+++++++++.+.++ ++|++.++++++.  ..
T Consensus       127 ~~~ta~~~l~~~~~~~~~~~~~~vlI~g~~g~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~g~~~v~~~~~~--~~  203 (326)
T cd08289         127 AGFTAALSIHRLEENGLTPEQGPVLVTGATGGVGSLAVSILAKLGYEVVASTGKADAADYLK-KLGAKEVIPREEL--QE  203 (326)
T ss_pred             HHHHHHHHHHHHHhcCCCCCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEecCHHHHHHHH-HcCCCEEEcchhH--HH
Confidence            4668888875443  2 345789999999999999999999999999999999999999998 8999888887643  24


Q ss_pred             HHHHhHCCCCccEEEeCCCchhHHHHHHhhccCCEEEEEecccccCCCCCCCccchHHHhhcceeEEEeecccc-ccchH
Q 028523           79 AALKRYFPEGINIYFENVGGKMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCLISKRIRMEGFLVPDY-FHLYP  157 (208)
Q Consensus        79 ~~~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~  157 (208)
                      +.+.+..++++|.++|++|+..+..++++++++|+++.+|....     .....+...++.+++++.+...... .....
T Consensus       204 ~~~~~~~~~~~d~vld~~g~~~~~~~~~~l~~~G~~i~~g~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  278 (326)
T cd08289         204 ESIKPLEKQRWAGAVDPVGGKTLAYLLSTLQYGGSVAVSGLTGG-----GEVETTVFPFILRGVNLLGIDSVECPMELRR  278 (326)
T ss_pred             HHHHhhccCCcCEEEECCcHHHHHHHHHHhhcCCEEEEEeecCC-----CCCCcchhhhhhccceEEEEEeEecCchHHH
Confidence            45555544489999999998889999999999999999997532     1112234455678888888754321 11122


Q ss_pred             HHHHHHHHHHHCCCceeeeeeeecCCcHHHHHHHHhcCCccceEEEEe
Q 028523          158 KFLEMMIPRIKEGKIVYVEDKAEGLESAPAALVGLFSGRNVGKQVVEV  205 (208)
Q Consensus       158 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~  205 (208)
                      +.+..+.+.+....+.+.+.++++++++.+|++.+.+++..||+|+++
T Consensus       279 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvv~~  326 (326)
T cd08289         279 RIWRRLATDLKPTQLLNEIKQEITLDELPEALKQILQGRVTGRTVVKL  326 (326)
T ss_pred             HHHHHHHhhcCccccccccceEeeHHHHHHHHHHHhcCcccceEEEeC
Confidence            334444444433333445678899999999999999999999999864

yhfp putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH

>PRK10754 quinone oxidoreductase, NADPH-dependent; Provisional

Probab=99.91  E-value=2.3e-22  Score=155.54  Aligned_cols=197  Identities=24%  Similarity=0.250  Sum_probs=154.1

Q ss_pred             chhhHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHHH
Q 028523            2 PGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAAL   81 (208)
Q Consensus         2 ~~~tA~~~l~~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~~   81 (208)
                      +++|||+++...+.+.+|++++|+|++|++|++++|+++.+|++|+++++++++.+.++ ++|++.++++++. ++.+.+
T Consensus       124 ~~~ta~~~l~~~~~~~~g~~vlI~g~~g~ig~~~~~lak~~G~~v~~~~~~~~~~~~~~-~~g~~~~~~~~~~-~~~~~~  201 (327)
T PRK10754        124 KGLTVYYLLRKTYEIKPDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGSAQKAQRAK-KAGAWQVINYREE-NIVERV  201 (327)
T ss_pred             HHHHHHHHHHhhcCCCCCCEEEEEeCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-HCCCCEEEcCCCC-cHHHHH
Confidence            35788999888889999999999999999999999999999999999999999999998 8999888888766 788888


Q ss_pred             HhHCCC-CccEEEeCCCchhHHHHHHhhccCCEEEEEecccccCCCCCCCccchHHHhhcceeE-EEeecccc---ccch
Q 028523           82 KRYFPE-GINIYFENVGGKMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCLISKRIRM-EGFLVPDY---FHLY  156 (208)
Q Consensus        82 ~~~~~~-~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~---~~~~  156 (208)
                      ++.+++ ++|+++||++++.....+++++++|+++.+|.....     ........+..++..+ .......+   +...
T Consensus       202 ~~~~~~~~~d~vl~~~~~~~~~~~~~~l~~~g~~v~~g~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  276 (327)
T PRK10754        202 KEITGGKKVRVVYDSVGKDTWEASLDCLQRRGLMVSFGNASGP-----VTGVNLGILNQKGSLYVTRPSLQGYITTREEL  276 (327)
T ss_pred             HHHcCCCCeEEEEECCcHHHHHHHHHHhccCCEEEEEccCCCC-----CCCcCHHHHhccCceEEecceeecccCCHHHH
Confidence            888776 899999999988889999999999999999875421     1111222221222111 11111111   2233


Q ss_pred             HHHHHHHHHHHHCCCceee--eeeeecCCcHHHHHHHHhcCCccceEEEEe
Q 028523          157 PKFLEMMIPRIKEGKIVYV--EDKAEGLESAPAALVGLFSGRNVGKQVVEV  205 (208)
Q Consensus       157 ~~~~~~~~~~~~~g~~~~~--~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~  205 (208)
                      .+.+..+++++.+|.+++.  ..++++++++.++++.+.++...+|+||.+
T Consensus       277 ~~~~~~~~~~l~~g~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~  327 (327)
T PRK10754        277 TEASNELFSLIASGVIKVDVAEQQKFPLKDAQRAHEILESRATQGSSLLIP  327 (327)
T ss_pred             HHHHHHHHHHHHCCCeeeecccCcEEcHHHHHHHHHHHHcCCCcceEEEeC
Confidence            4556778999999999864  457899999999999999999899999863

>cd05284 arabinose_DH_like D-arabinose dehydrogenase

Probab=99.91  E-value=2.5e-22  Score=156.10  Aligned_cols=187  Identities=22%  Similarity=0.282  Sum_probs=154.2

Q ss_pred             chhhHHHHHHHh-cCCCCCCEEEEecCCchHHHHHHHHHHHcC-CEEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHH
Q 028523            2 PGMTAYAGFFEV-CSPKQGEYVFVSAASGAVGQLVGQFAKLVG-CYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDA   79 (208)
Q Consensus         2 ~~~tA~~~l~~~-~~~~~g~~vli~ga~g~vG~~a~qla~~~g-~~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~   79 (208)
                      +++|||+++... ..+.++++|||+|+ +++|++++|+|+..| .+|+++++++++.+.++ ++|+++++++++  .+.+
T Consensus       150 ~~~ta~~~l~~~~~~~~~~~~vlI~g~-~~vg~~~~~~a~~~g~~~v~~~~~~~~~~~~~~-~~g~~~~~~~~~--~~~~  225 (340)
T cd05284         150 AGLTAYHAVKKALPYLDPGSTVVVIGV-GGLGHIAVQILRALTPATVIAVDRSEEALKLAE-RLGADHVLNASD--DVVE  225 (340)
T ss_pred             hHHHHHHHHHHhcccCCCCCEEEEEcC-cHHHHHHHHHHHHhCCCcEEEEeCCHHHHHHHH-HhCCcEEEcCCc--cHHH
Confidence            468999999776 46889999999995 679999999999999 79999999999999998 899988988775  3667


Q ss_pred             HHHhHCCC-CccEEEeCCCc-hhHHHHHHhhccCCEEEEEecccccCCCCCCCccchHHHhhcceeEEEeeccccccchH
Q 028523           80 ALKRYFPE-GINIYFENVGG-KMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCLISKRIRMEGFLVPDYFHLYP  157 (208)
Q Consensus        80 ~~~~~~~~-~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  157 (208)
                      ++++..++ ++|+++|++|+ .....++++|+++|+++.+|....       ........+.+++++.+.....     .
T Consensus       226 ~i~~~~~~~~~dvvld~~g~~~~~~~~~~~l~~~g~~i~~g~~~~-------~~~~~~~~~~~~~~~~~~~~~~-----~  293 (340)
T cd05284         226 EVRELTGGRGADAVIDFVGSDETLALAAKLLAKGGRYVIVGYGGH-------GRLPTSDLVPTEISVIGSLWGT-----R  293 (340)
T ss_pred             HHHHHhCCCCCCEEEEcCCCHHHHHHHHHHhhcCCEEEEEcCCCC-------CccCHHHhhhcceEEEEEeccc-----H
Confidence            77777766 89999999995 788999999999999999986541       1122334457888888766432     4


Q ss_pred             HHHHHHHHHHHCCCceeeeeeeecCCcHHHHHHHHhcCCccceEEEEe
Q 028523          158 KFLEMMIPRIKEGKIVYVEDKAEGLESAPAALVGLFSGRNVGKQVVEV  205 (208)
Q Consensus       158 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~  205 (208)
                      +.+.++++++.+|.+++. ...++++++++|++.+.+++..||+|+.+
T Consensus       294 ~~~~~~~~~l~~g~l~~~-~~~~~~~~~~~a~~~~~~~~~~gkvv~~~  340 (340)
T cd05284         294 AELVEVVALAESGKVKVE-ITKFPLEDANEALDRLREGRVTGRAVLVP  340 (340)
T ss_pred             HHHHHHHHHHHhCCCCcc-eEEEeHHHHHHHHHHHHcCCccceEEecC
Confidence            567889999999998864 45799999999999999999889999864

This group contains arabinose dehydrogenase (AraDH) and related alcohol dehydrogenases. AraDH is a member of the medium chain dehydrogenase/reductase family and catalyzes the NAD(P)-dependent oxidation of D-arabinose and other pentoses, the initial step in the metabolism of d-arabinose into 2-oxoglutarate. Like the alcohol dehydrogenases, AraDH binds a zinc in the catalytic cleft as well as a distal structural zinc. AraDH forms homotetramers as a dimer of dimers. AraDH replaces a conserved catalytic His with replace with Arg, compared to the canonical ADH site. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol d

>cd08260 Zn_ADH6 Alcohol dehydrogenases of the MDR family

Probab=99.91  E-value=2.7e-22  Score=156.26  Aligned_cols=192  Identities=21%  Similarity=0.292  Sum_probs=158.7

Q ss_pred             chhhHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeEecCC-CccHHHH
Q 028523            2 PGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKE-EPDLDAA   80 (208)
Q Consensus         2 ~~~tA~~~l~~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~v~~~~~-~~~~~~~   80 (208)
                      +++|||+++.+.+++.++++|+|+| +|++|++++|+|+..|++|+++++++++.+.++ ++|+++++++++ . ++...
T Consensus       149 ~~~ta~~~l~~~~~~~~~~~vlV~g-~g~vg~~~~~~a~~~G~~vi~~~~~~~~~~~~~-~~g~~~~i~~~~~~-~~~~~  225 (345)
T cd08260         149 RFATAFRALVHQARVKPGEWVAVHG-CGGVGLSAVMIASALGARVIAVDIDDDKLELAR-ELGAVATVNASEVE-DVAAA  225 (345)
T ss_pred             chHHHHHHHHHccCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCeEEEEeCCHHHHHHHH-HhCCCEEEccccch-hHHHH
Confidence            5789999998888999999999999 699999999999999999999999999999998 899999999887 5 67777


Q ss_pred             HHhHCCCCccEEEeCCC-chhHHHHHHhhccCCEEEEEecccccCCCCCCCccchHHHhhcceeEEEeeccccccchHHH
Q 028523           81 LKRYFPEGINIYFENVG-GKMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCLISKRIRMEGFLVPDYFHLYPKF  159 (208)
Q Consensus        81 ~~~~~~~~~d~v~d~~g-~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (208)
                      +.+..++++|++||++| ...+...+++++++|+++.+|......   .....+....+.+++++.+.....     .+.
T Consensus       226 ~~~~~~~~~d~vi~~~g~~~~~~~~~~~l~~~g~~i~~g~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~-----~~~  297 (345)
T cd08260         226 VRDLTGGGAHVSVDALGIPETCRNSVASLRKRGRHVQVGLTLGEE---AGVALPMDRVVARELEIVGSHGMP-----AHR  297 (345)
T ss_pred             HHHHhCCCCCEEEEcCCCHHHHHHHHHHhhcCCEEEEeCCcCCCC---CccccCHHHHhhcccEEEeCCcCC-----HHH
Confidence            77766558999999998 478889999999999999998754311   002233444557778887766432     456


Q ss_pred             HHHHHHHHHCCCceee--eeeeecCCcHHHHHHHHhcCCccceEEEE
Q 028523          160 LEMMIPRIKEGKIVYV--EDKAEGLESAPAALVGLFSGRNVGKQVVE  204 (208)
Q Consensus       160 ~~~~~~~~~~g~~~~~--~~~~~~~~~~~~a~~~~~~~~~~gk~vv~  204 (208)
                      +++++++++++.+.+.  +...+++++++++++.+.++...+|+|++
T Consensus       298 ~~~~~~l~~~~~i~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~v~~  344 (345)
T cd08260         298 YDAMLALIASGKLDPEPLVGRTISLDEAPDALAAMDDYATAGITVIT  344 (345)
T ss_pred             HHHHHHHHHcCCCChhhheeEEecHHHHHHHHHHHHcCCCCceEEec
Confidence            8889999999998764  56789999999999999999988998864

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group has the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (ty

>TIGR02817 adh_fam_1 zinc-binding alcohol dehydrogenase family protein

Probab=99.91  E-value=3e-22  Score=155.38  Aligned_cols=191  Identities=18%  Similarity=0.260  Sum_probs=150.2

Q ss_pred             chhhHHHHHHHhcCCCC-----CCEEEEecCCchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHhcCCCeeEecCCCc
Q 028523            2 PGMTAYAGFFEVCSPKQ-----GEYVFVSAASGAVGQLVGQFAKLV-GCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEP   75 (208)
Q Consensus         2 ~~~tA~~~l~~~~~~~~-----g~~vli~ga~g~vG~~a~qla~~~-g~~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~   75 (208)
                      +++|||+++...+++.+     |++|||+|++|++|++++|+|+.+ |++|+++++++++.+.++ ++|++.++++.+  
T Consensus       127 ~~~ta~~~l~~~~~~~~~~~~~g~~vlV~ga~g~vg~~~~~~ak~~~G~~vi~~~~~~~~~~~l~-~~g~~~~~~~~~--  203 (336)
T TIGR02817       127 TSITAWELLFDRLGINDPVAGDKRALLIIGGAGGVGSILIQLARQLTGLTVIATASRPESQEWVL-ELGAHHVIDHSK--  203 (336)
T ss_pred             HHHHHHHHHHHhcCCCCCCCCCCCEEEEEcCCcHHHHHHHHHHHHhCCCEEEEEcCcHHHHHHHH-HcCCCEEEECCC--
Confidence            56899999988888877     999999999999999999999998 999999999999999998 899999988654  


Q ss_pred             cHHHHHHhHCCCCccEEEeCCC-chhHHHHHHhhccCCEEEEEecccccCCCCCCCccchHHHhhcceeEEEeecc--c-
Q 028523           76 DLDAALKRYFPEGINIYFENVG-GKMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCLISKRIRMEGFLVP--D-  151 (208)
Q Consensus        76 ~~~~~~~~~~~~~~d~v~d~~g-~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~-  151 (208)
                      ++..++++..++++|+++|+++ ++.....+++++++|+++.++...         ..+...+..+++++.+....  . 
T Consensus       204 ~~~~~i~~~~~~~vd~vl~~~~~~~~~~~~~~~l~~~G~~v~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~  274 (336)
T TIGR02817       204 PLKAQLEKLGLEAVSYVFSLTHTDQHFKEIVELLAPQGRFALIDDPA---------ELDISPFKRKSISLHWEFMFTRSM  274 (336)
T ss_pred             CHHHHHHHhcCCCCCEEEEcCCcHHHHHHHHHHhccCCEEEEEcccc---------cccchhhhhcceEEEEEEeecccc
Confidence            5777777754448999999986 578899999999999999874321         12223334455665543332  1 


Q ss_pred             c--ccch--HHHHHHHHHHHHCCCceeeeeeeec---CCcHHHHHHHHhcCCccceEEEE
Q 028523          152 Y--FHLY--PKFLEMMIPRIKEGKIVYVEDKAEG---LESAPAALVGLFSGRNVGKQVVE  204 (208)
Q Consensus       152 ~--~~~~--~~~~~~~~~~~~~g~~~~~~~~~~~---~~~~~~a~~~~~~~~~~gk~vv~  204 (208)
                      +  +...  ...+.++++++.++.+++.+.+.++   ++++.+|++.+.+++..||++++
T Consensus       275 ~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~  334 (336)
T TIGR02817       275 FQTADMIEQHHLLNRVARLVDAGKIRTTLAETFGTINAANLKRAHALIESGKARGKIVLE  334 (336)
T ss_pred             cchhhhhhhHHHHHHHHHHHHCCCeeccchhccCCCCHHHHHHHHHHHHcCCccceEEEe
Confidence            1  1111  2568889999999999877665554   68999999999999988999875

Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). While some current members of this family carry designations as putative alginate lyase, it seems no sequence with a direct characterization as such is detected by this model.

>cd05280 MDR_yhdh_yhfp Yhdh and yhfp-like putative quinone oxidoreductases

Probab=99.91  E-value=1.9e-22  Score=155.79  Aligned_cols=195  Identities=22%  Similarity=0.345  Sum_probs=149.4

Q ss_pred             chhhHHHHHHHhcCC--C-CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHH
Q 028523            2 PGMTAYAGFFEVCSP--K-QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLD   78 (208)
Q Consensus         2 ~~~tA~~~l~~~~~~--~-~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~   78 (208)
                      +++|||+++..+.+.  . .+++|+|+|++|++|++++|+|+.+|++|+++++++++.+.++ ++|++.++++++.  ..
T Consensus       127 ~~~ta~~~l~~~~~~~~~~~~~~vlI~g~~g~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~g~~~~~~~~~~--~~  203 (325)
T cd05280         127 AGFTAALSVHRLEDNGQTPEDGPVLVTGATGGVGSIAVAILAKLGYTVVALTGKEEQADYLK-SLGASEVLDREDL--LD  203 (325)
T ss_pred             HHHHHHHHHHHHhhccCCCCCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-hcCCcEEEcchhH--HH
Confidence            356888888665433  5 4679999999999999999999999999999999999999998 8999888876542  12


Q ss_pred             HHHHhHCCCCccEEEeCCCchhHHHHHHhhccCCEEEEEecccccCCCCCCCccchHHHhhcceeEEEeecccc-ccchH
Q 028523           79 AALKRYFPEGINIYFENVGGKMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCLISKRIRMEGFLVPDY-FHLYP  157 (208)
Q Consensus        79 ~~~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~  157 (208)
                      ...+....+++|+++|+++++.+..++++++++|+++.+|.....    + ........+.+++++.+...... +....
T Consensus       204 ~~~~~~~~~~~d~vi~~~~~~~~~~~~~~l~~~g~~v~~g~~~~~----~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  278 (325)
T cd05280         204 ESKKPLLKARWAGAIDTVGGDVLANLLKQTKYGGVVASCGNAAGP----E-LTTTVLPFILRGVSLLGIDSVNCPMELRK  278 (325)
T ss_pred             HHHHHhcCCCccEEEECCchHHHHHHHHhhcCCCEEEEEecCCCC----c-cccccchheeeeeEEEEEEeecCchhHHH
Confidence            223333334799999999999999999999999999999875421    1 12233444468888888765443 22334


Q ss_pred             HHHHHHHHHHHCCCceeeeeeeecCCcHHHHHHHHhcCCccceEEEEe
Q 028523          158 KFLEMMIPRIKEGKIVYVEDKAEGLESAPAALVGLFSGRNVGKQVVEV  205 (208)
Q Consensus       158 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~  205 (208)
                      +.++.+.+++..+ +.+.+..++++++++++++.+.++...||+|+++
T Consensus       279 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~  325 (325)
T cd05280         279 QVWQKLATEWKPD-LLEIVVREISLEELPEAIDRLLAGKHRGRTVVKI  325 (325)
T ss_pred             HHHHHHHHHHhcC-CccceeeEecHHHHHHHHHHHhcCCcceEEEEeC
Confidence            5667777777777 4445777899999999999999999999999864

Yhdh and yhfp-like putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and so

>TIGR02823 oxido_YhdH putative quinone oxidoreductase, YhdH/YhfP family

Probab=99.91  E-value=3.2e-22  Score=154.48  Aligned_cols=194  Identities=24%  Similarity=0.353  Sum_probs=151.0

Q ss_pred             chhhHHHHHHHh--cCCCCCC-EEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHH
Q 028523            2 PGMTAYAGFFEV--CSPKQGE-YVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLD   78 (208)
Q Consensus         2 ~~~tA~~~l~~~--~~~~~g~-~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~   78 (208)
                      +++|||+++...  +.+.+|+ +|+|+|++|++|++++|+|+.+|++++++++++++.+.++ ++|++.++++++. +. 
T Consensus       126 ~~~ta~~~~~~~~~~~~~~~~~~vlI~g~~g~vg~~~~~la~~~G~~vi~~~~~~~~~~~~~-~~g~~~~~~~~~~-~~-  202 (323)
T TIGR02823       126 AGFTAALSVMALERNGLTPEDGPVLVTGATGGVGSLAVAILSKLGYEVVASTGKAEEEDYLK-ELGASEVIDREDL-SP-  202 (323)
T ss_pred             hHHHHHHHHHHhhhcCCCCCCceEEEEcCCcHHHHHHHHHHHHcCCeEEEEeCCHHHHHHHH-hcCCcEEEccccH-HH-
Confidence            356777777544  3488898 9999999999999999999999999999988999889997 8999888876543 22 


Q ss_pred             HHHHhHCCCCccEEEeCCCchhHHHHHHhhccCCEEEEEecccccCCCCCCCccchHHHhhcceeEEEeecccc-ccchH
Q 028523           79 AALKRYFPEGINIYFENVGGKMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCLISKRIRMEGFLVPDY-FHLYP  157 (208)
Q Consensus        79 ~~~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~  157 (208)
                       .++....+++|.++||+|++.+..++++++++|+++.+|....     .....+...++.+++++.+...... .....
T Consensus       203 -~~~~~~~~~~d~vld~~g~~~~~~~~~~l~~~G~~v~~g~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  276 (323)
T TIGR02823       203 -PGKPLEKERWAGAVDTVGGHTLANVLAQLKYGGAVAACGLAGG-----PDLPTTVLPFILRGVSLLGIDSVYCPMALRE  276 (323)
T ss_pred             -HHHHhcCCCceEEEECccHHHHHHHHHHhCCCCEEEEEcccCC-----CCccccHHHHhhcceEEEEEeccccCchhHH
Confidence             4444544469999999998889999999999999999997642     1112233445578888888765432 22234


Q ss_pred             HHHHHHHHHHHCCCceeeeeeeecCCcHHHHHHHHhcCCccceEEEEe
Q 028523          158 KFLEMMIPRIKEGKIVYVEDKAEGLESAPAALVGLFSGRNVGKQVVEV  205 (208)
Q Consensus       158 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~  205 (208)
                      +.+..+.+++..+.+.+. ..+++++++++|++.+.++...+|+|+++
T Consensus       277 ~~~~~~~~~~~~~~~~~~-~~~~~l~~~~~a~~~~~~~~~~~k~vv~~  323 (323)
T TIGR02823       277 AAWQRLATDLKPRNLESI-TREITLEELPEALEQILAGQHRGRTVVDV  323 (323)
T ss_pred             HHHHHHHHHhhcCCCcCc-eeeecHHHHHHHHHHHhCCCccceEEEeC
Confidence            456777788888888765 45899999999999999999899999864

This model represents a subfamily of pfam00107 as defined by Pfam, a superfamily in which some members are zinc-binding medium-chain alcohol dehydrogenases while others are quinone oxidoreductases with no bound zinc. This subfamily includes proteins studied crystallographically for insight into function: YhdH from Escherichia coli and YhfP from Bacillus subtilis. Members bind NADPH or NAD, but not zinc.

>cd08261 Zn_ADH7 Alcohol dehydrogenases of the MDR family

Probab=99.91  E-value=5.3e-22  Score=154.13  Aligned_cols=189  Identities=19%  Similarity=0.234  Sum_probs=155.5

Q ss_pred             chhhHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHHH
Q 028523            2 PGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAAL   81 (208)
Q Consensus         2 ~~~tA~~~l~~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~~   81 (208)
                      +++++++++ ..+++.+|++|||+| +|++|++++|+|+.+|++|+++++++++.+.++ ++|+++++++++. ++.+.+
T Consensus       144 ~~~~a~~~~-~~~~l~~g~~vLI~g-~g~vG~~a~~lA~~~g~~v~~~~~s~~~~~~~~-~~g~~~v~~~~~~-~~~~~l  219 (337)
T cd08261         144 PLAIGAHAV-RRAGVTAGDTVLVVG-AGPIGLGVIQVAKARGARVIVVDIDDERLEFAR-ELGADDTINVGDE-DVAARL  219 (337)
T ss_pred             hHHHHHHHH-HhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCeEEEECCCHHHHHHHH-HhCCCEEecCccc-CHHHHH
Confidence            456788887 778999999999996 589999999999999999999998999999997 8999999998876 788888


Q ss_pred             HhHCCC-CccEEEeCCCc-hhHHHHHHhhccCCEEEEEecccccCCCCCCCccchHHHhhcceeEEEeeccccccchHHH
Q 028523           82 KRYFPE-GINIYFENVGG-KMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCLISKRIRMEGFLVPDYFHLYPKF  159 (208)
Q Consensus        82 ~~~~~~-~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (208)
                      .+..++ ++|+++|+.|+ ..+..++++|+++|+++.+|....      ........+..+++++.+...     ...+.
T Consensus       220 ~~~~~~~~vd~vld~~g~~~~~~~~~~~l~~~G~~i~~g~~~~------~~~~~~~~~~~~~~~~~~~~~-----~~~~~  288 (337)
T cd08261         220 RELTDGEGADVVIDATGNPASMEEAVELVAHGGRVVLVGLSKG------PVTFPDPEFHKKELTILGSRN-----ATRED  288 (337)
T ss_pred             HHHhCCCCCCEEEECCCCHHHHHHHHHHHhcCCEEEEEcCCCC------CCccCHHHHHhCCCEEEEecc-----CChhh
Confidence            877766 89999999985 688999999999999999886541      112233344556777666432     23567


Q ss_pred             HHHHHHHHHCCCcee--eeeeeecCCcHHHHHHHHhcC-CccceEEEEe
Q 028523          160 LEMMIPRIKEGKIVY--VEDKAEGLESAPAALVGLFSG-RNVGKQVVEV  205 (208)
Q Consensus       160 ~~~~~~~~~~g~~~~--~~~~~~~~~~~~~a~~~~~~~-~~~gk~vv~~  205 (208)
                      +.++++++.+|.+++  .+..+++++++.++++.+.++ ...+|+|+++
T Consensus       289 ~~~~~~l~~~~~i~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~k~v~~~  337 (337)
T cd08261         289 FPDVIDLLESGKVDPEALITHRFPFEDVPEAFDLWEAPPGGVIKVLIEF  337 (337)
T ss_pred             HHHHHHHHHcCCCChhhheEEEeeHHHHHHHHHHHhcCCCceEEEEEeC
Confidence            888999999999987  667789999999999999988 4779999864

This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase,

>cd08230 glucose_DH Glucose dehydrogenase

Probab=99.91  E-value=1.6e-22  Score=158.14  Aligned_cols=173  Identities=18%  Similarity=0.186  Sum_probs=134.0

Q ss_pred             CCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeC---CHHHHHHHHHhcCCCeeEecCCCccHHHHHHhHCCCCccE
Q 028523           15 SPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAG---SKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINI   91 (208)
Q Consensus        15 ~~~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~---s~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~d~   91 (208)
                      .+++|++|+|+|+ |++|++++|+||++|++|+++++   ++++.+.++ ++|++. +++.+. ++.+ .+  ..+++|+
T Consensus       169 ~~~~g~~vlI~G~-G~vG~~a~q~ak~~G~~vi~~~~~~~~~~~~~~~~-~~Ga~~-v~~~~~-~~~~-~~--~~~~~d~  241 (355)
T cd08230         169 PTWNPRRALVLGA-GPIGLLAALLLRLRGFEVYVLNRRDPPDPKADIVE-ELGATY-VNSSKT-PVAE-VK--LVGEFDL  241 (355)
T ss_pred             ccCCCCEEEEECC-CHHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHH-HcCCEE-ecCCcc-chhh-hh--hcCCCCE
Confidence            3578999999985 99999999999999999999987   678888888 999986 466554 4443 21  2237999


Q ss_pred             EEeCCCc-hhHHHHHHhhccCCEEEEEecccccCCCCCCCccc----hHHHhhcceeEEEeeccccccchHHHHHHHHHH
Q 028523           92 YFENVGG-KMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHN----LTCLISKRIRMEGFLVPDYFHLYPKFLEMMIPR  166 (208)
Q Consensus        92 v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  166 (208)
                      +|||+|+ ..+..++++++++|+++.+|...+.    ....++    ...++.+++++.|+....     .+.+++++++
T Consensus       242 vid~~g~~~~~~~~~~~l~~~G~~v~~G~~~~~----~~~~~~~~~~~~~~~~k~~~i~g~~~~~-----~~~~~~~~~~  312 (355)
T cd08230         242 IIEATGVPPLAFEALPALAPNGVVILFGVPGGG----REFEVDGGELNRDLVLGNKALVGSVNAN-----KRHFEQAVED  312 (355)
T ss_pred             EEECcCCHHHHHHHHHHccCCcEEEEEecCCCC----CccccChhhhhhhHhhcCcEEEEecCCc-----hhhHHHHHHH
Confidence            9999996 5789999999999999999986531    111122    245677899999876543     3456777788


Q ss_pred             HHCCC------ceeeeeeeecCCcHHHHHHHHhcCCccceEEEEe
Q 028523          167 IKEGK------IVYVEDKAEGLESAPAALVGLFSGRNVGKQVVEV  205 (208)
Q Consensus       167 ~~~g~------~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~  205 (208)
                      +.++.      +++.++++|+++++.+|++.+.++.  .|+||++
T Consensus       313 l~~~~~~~~~~~~~~i~~~~~l~~~~~a~~~~~~~~--~K~v~~~  355 (355)
T cd08230         313 LAQWKYRWPGVLERLITRRVPLEEFAEALTEKPDGE--IKVVIEW  355 (355)
T ss_pred             HHhcccccccchHHheeeeecHHHHHHHHHhcccCC--eEEEeeC
Confidence            87765      5667889999999999999887654  5999874

Glucose dehydrogenase (GlcDH), a member of the medium chain dehydrogenase/zinc-dependent alcohol dehydrogenase-like family, catalyzes the NADP(+)-dependent oxidation of glucose to gluconate, the first step in the Entner-Doudoroff pathway, an alternative to or substitute for glycolysis or the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossman fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contai

>cd08285 NADP_ADH NADP(H)-dependent alcohol dehydrogenases

Probab=99.91  E-value=4.6e-22  Score=155.31  Aligned_cols=192  Identities=19%  Similarity=0.227  Sum_probs=150.0

Q ss_pred             chhhHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHH
Q 028523            2 PGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGC-YVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAA   80 (208)
Q Consensus         2 ~~~tA~~~l~~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g~-~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~   80 (208)
                      +++|||+++ ..+.+++|++|||+| +|++|++++|+|+.+|+ .++++++++++.+.++ ++|++.++++++. ++.+.
T Consensus       151 ~~~ta~~~~-~~~~~~~g~~vlI~g-~g~iG~~~~~lak~~G~~~v~~~~~~~~~~~~~~-~~g~~~~v~~~~~-~~~~~  226 (351)
T cd08285         151 MMSTGFHGA-ELANIKLGDTVAVFG-IGPVGLMAVAGARLRGAGRIIAVGSRPNRVELAK-EYGATDIVDYKNG-DVVEQ  226 (351)
T ss_pred             chhhHHHHH-HccCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHH-HcCCceEecCCCC-CHHHH
Confidence            467899996 668899999999997 59999999999999999 6888888888888888 8999999998876 77778


Q ss_pred             HHhHCCC-CccEEEeCCCc-hhHHHHHHhhccCCEEEEEecccccCCCCCCCccc--hHHHhhcceeEEEeeccccccch
Q 028523           81 LKRYFPE-GINIYFENVGG-KMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHN--LTCLISKRIRMEGFLVPDYFHLY  156 (208)
Q Consensus        81 ~~~~~~~-~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~  156 (208)
                      +.+...+ ++|+++|++|+ +.+..++++|+++|+++.+|.....    .....+  ......+..++.+.....    .
T Consensus       227 i~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~----~~~~~~~~~~~~~~~~~~i~~~~~~~----~  298 (351)
T cd08285         227 ILKLTGGKGVDAVIIAGGGQDTFEQALKVLKPGGTISNVNYYGED----DYLPIPREEWGVGMGHKTINGGLCPG----G  298 (351)
T ss_pred             HHHHhCCCCCcEEEECCCCHHHHHHHHHHhhcCCEEEEecccCCC----ceeecChhhhhhhccccEEEEeecCC----c
Confidence            8777765 89999999995 6889999999999999999875531    111111  111122334444332211    1


Q ss_pred             HHHHHHHHHHHHCCCcee---eeeeeecCCcHHHHHHHHhcCC-ccceEEEEe
Q 028523          157 PKFLEMMIPRIKEGKIVY---VEDKAEGLESAPAALVGLFSGR-NVGKQVVEV  205 (208)
Q Consensus       157 ~~~~~~~~~~~~~g~~~~---~~~~~~~~~~~~~a~~~~~~~~-~~gk~vv~~  205 (208)
                      .+.++++++++++|++++   .+.++++++++.+|++.+.+++ ...|++|++
T Consensus       299 ~~~~~~~~~~~~~g~i~~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~k~~~~~  351 (351)
T cd08285         299 RLRMERLASLIEYGRVDPSKLLTHHFFGFDDIEEALMLMKDKPDDLIKPVIIF  351 (351)
T ss_pred             cccHHHHHHHHHcCCCChhhceeccccCHHHHHHHHHHHhcccCCeEEEEEeC
Confidence            356888999999999987   3445689999999999999987 468999864

This group is predominated by atypical alcohol dehydrogenases; they exist as tetramers and exhibit specificity for NADP(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like other zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric ADHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains; however, they do not have and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.

>cd08276 MDR7 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=99.90  E-value=9.5e-22  Score=152.41  Aligned_cols=191  Identities=29%  Similarity=0.392  Sum_probs=162.7

Q ss_pred             chhhHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeEecCC-CccHHHH
Q 028523            2 PGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKE-EPDLDAA   80 (208)
Q Consensus         2 ~~~tA~~~l~~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~v~~~~~-~~~~~~~   80 (208)
                      ++++||+++...+.+++|++++|+| +|++|++++++++..|++|+++++++++.+.++ ++|.+.++++++ . ++...
T Consensus       144 ~~~~a~~~l~~~~~~~~g~~vli~g-~g~~g~~~~~~a~~~G~~v~~~~~~~~~~~~~~-~~g~~~~~~~~~~~-~~~~~  220 (336)
T cd08276         144 AGLTAWNALFGLGPLKPGDTVLVQG-TGGVSLFALQFAKAAGARVIATSSSDEKLERAK-ALGADHVINYRTTP-DWGEE  220 (336)
T ss_pred             HHHHHHHHHHhhcCCCCCCEEEEEC-CcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-HcCCCEEEcCCccc-CHHHH
Confidence            4678999998888999999999995 799999999999999999999999999999998 789988888876 4 77778


Q ss_pred             HHhHCCC-CccEEEeCCCchhHHHHHHhhccCCEEEEEecccccCCCCCCCccchHHHhhcceeEEEeeccccccchHHH
Q 028523           81 LKRYFPE-GINIYFENVGGKMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCLISKRIRMEGFLVPDYFHLYPKF  159 (208)
Q Consensus        81 ~~~~~~~-~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (208)
                      +.+.+++ ++|.++|+.++.....++++++++|+++.+|.....     ....+....+.+++++.+.....     ...
T Consensus       221 ~~~~~~~~~~d~~i~~~~~~~~~~~~~~l~~~G~~v~~g~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~-----~~~  290 (336)
T cd08276         221 VLKLTGGRGVDHVVEVGGPGTLAQSIKAVAPGGVISLIGFLSGF-----EAPVLLLPLLTKGATLRGIAVGS-----RAQ  290 (336)
T ss_pred             HHHHcCCCCCcEEEECCChHHHHHHHHhhcCCCEEEEEccCCCC-----ccCcCHHHHhhcceEEEEEecCc-----HHH
Confidence            8888776 899999999988899999999999999999875431     11234566678899998887654     557


Q ss_pred             HHHHHHHHHCCCceeeeeeeecCCcHHHHHHHHhcCCccceEEEEe
Q 028523          160 LEMMIPRIKEGKIVYVEDKAEGLESAPAALVGLFSGRNVGKQVVEV  205 (208)
Q Consensus       160 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~  205 (208)
                      +.++.+++.++.+.+.....++++++.++++.+.++...+|+++++
T Consensus       291 ~~~~~~l~~~~~l~~~~~~~~~~~~~~~a~~~~~~~~~~~kvv~~~  336 (336)
T cd08276         291 FEAMNRAIEAHRIRPVIDRVFPFEEAKEAYRYLESGSHFGKVVIRV  336 (336)
T ss_pred             HHHHHHHHHcCCcccccCcEEeHHHHHHHHHHHHhCCCCceEEEeC
Confidence            8888899999988877778899999999999999888889999863

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd08254 hydroxyacyl_CoA_DH 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase, N-benzyl-3-pyrrolidinol dehydrogenase, and other MDR family members

Probab=99.90  E-value=7.8e-22  Score=153.10  Aligned_cols=188  Identities=24%  Similarity=0.341  Sum_probs=155.6

Q ss_pred             chhhHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHHH
Q 028523            2 PGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAAL   81 (208)
Q Consensus         2 ~~~tA~~~l~~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~~   81 (208)
                      +++|||+++.....++++++|||.| +|++|++++|+|+..|++|+++++++++.+.++ ++|.+.++++.+. ...+.+
T Consensus       149 ~~~ta~~~l~~~~~~~~~~~vli~g-~g~vG~~~~~la~~~G~~V~~~~~s~~~~~~~~-~~g~~~~~~~~~~-~~~~~~  225 (338)
T cd08254         149 AVLTPYHAVVRAGEVKPGETVLVIG-LGGLGLNAVQIAKAMGAAVIAVDIKEEKLELAK-ELGADEVLNSLDD-SPKDKK  225 (338)
T ss_pred             hHHHHHHHHHhccCCCCCCEEEEEC-CcHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHH-HhCCCEEEcCCCc-CHHHHH
Confidence            5789999998888899999999976 699999999999999999999999999999998 8999888887765 666666


Q ss_pred             HhHCCC-CccEEEeCCC-chhHHHHHHhhccCCEEEEEecccccCCCCCCCccchHHHhhcceeEEEeeccccccchHHH
Q 028523           82 KRYFPE-GINIYFENVG-GKMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCLISKRIRMEGFLVPDYFHLYPKF  159 (208)
Q Consensus        82 ~~~~~~-~~d~v~d~~g-~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (208)
                       ....+ ++|+++||.| ...+..++++|+++|+++.+|....      ....+....+.++.++.++....     .+.
T Consensus       226 -~~~~~~~~D~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~------~~~~~~~~~~~~~~~~~~~~~~~-----~~~  293 (338)
T cd08254         226 -AAGLGGGFDVIFDFVGTQPTFEDAQKAVKPGGRIVVVGLGRD------KLTVDLSDLIARELRIIGSFGGT-----PED  293 (338)
T ss_pred             -HHhcCCCceEEEECCCCHHHHHHHHHHhhcCCEEEEECCCCC------CCccCHHHHhhCccEEEEeccCC-----HHH
Confidence             44444 8999999998 4688999999999999999986432      11233455666777777655432     567


Q ss_pred             HHHHHHHHHCCCceeeeeeeecCCcHHHHHHHHhcCCccceEEEEe
Q 028523          160 LEMMIPRIKEGKIVYVEDKAEGLESAPAALVGLFSGRNVGKQVVEV  205 (208)
Q Consensus       160 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~  205 (208)
                      +..+.++++++.+.+. .+.++++++.++++.+.+++..+|+|+++
T Consensus       294 ~~~~~~ll~~~~l~~~-~~~~~~~~~~~a~~~~~~~~~~~kvv~~~  338 (338)
T cd08254         294 LPEVLDLIAKGKLDPQ-VETRPLDEIPEVLERLHKGKVKGRVVLVP  338 (338)
T ss_pred             HHHHHHHHHcCCCccc-ceeEcHHHHHHHHHHHHcCCccceEEEeC
Confidence            8889999999999876 56899999999999999999899999875

This group contains enzymes of the zinc-dependent alcohol dehydrogenase family, including members (aka MDR) identified as 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase and N-benzyl-3-pyrrolidinol dehydrogenase. 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase catalyzes the conversion of 6-Hydroxycyclohex-1-enecarbonyl-CoA and NAD+ to 6-Ketoxycyclohex-1-ene-1-carboxyl-CoA,NADH, and H+. This group displays the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentatio

>cd08253 zeta_crystallin Zeta-crystallin with NADP-dependent quinone reductase activity (QOR)

Probab=99.90  E-value=8.9e-22  Score=151.58  Aligned_cols=196  Identities=29%  Similarity=0.401  Sum_probs=161.8

Q ss_pred             chhhHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHHH
Q 028523            2 PGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAAL   81 (208)
Q Consensus         2 ~~~tA~~~l~~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~~   81 (208)
                      ++.|||+++..++++.+|++++|+|+++++|++++++++..|++|+++++++++.+.+. ++|.+.++++... ++...+
T Consensus       128 ~~~~a~~~l~~~~~~~~g~~vlI~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~g~~~~~~~~~~-~~~~~~  205 (325)
T cd08253         128 PALTAYRALFHRAGAKAGETVLVHGGSGAVGHAAVQLARWAGARVIATASSAEGAELVR-QAGADAVFNYRAE-DLADRI  205 (325)
T ss_pred             HHHHHHHHHHHHhCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-HcCCCEEEeCCCc-CHHHHH
Confidence            56789999988889999999999999999999999999999999999999999999998 8999888888766 677777


Q ss_pred             HhHCCC-CccEEEeCCCchhHHHHHHhhccCCEEEEEecccccCCCCCCCccchHHHhhcceeEEEeecccc-ccchHHH
Q 028523           82 KRYFPE-GINIYFENVGGKMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCLISKRIRMEGFLVPDY-FHLYPKF  159 (208)
Q Consensus        82 ~~~~~~-~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~  159 (208)
                      .+...+ ++|+++++.++......+++++++|+++.++....      .........+.++.++.+...... +....+.
T Consensus       206 ~~~~~~~~~d~vi~~~~~~~~~~~~~~l~~~g~~v~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  279 (325)
T cd08253         206 LAATAGQGVDVIIEVLANVNLAKDLDVLAPGGRIVVYGSGGL------RGTIPINPLMAKEASIRGVLLYTATPEERAAA  279 (325)
T ss_pred             HHHcCCCceEEEEECCchHHHHHHHHhhCCCCEEEEEeecCC------cCCCChhHHHhcCceEEeeehhhcCHHHHHHH
Confidence            777665 89999999998888889999999999999987541      112223334667777776654332 3444567


Q ss_pred             HHHHHHHHHCCCceeeeeeeecCCcHHHHHHHHhcCCccceEEEEe
Q 028523          160 LEMMIPRIKEGKIVYVEDKAEGLESAPAALVGLFSGRNVGKQVVEV  205 (208)
Q Consensus       160 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~  205 (208)
                      +..+.+++.++.+++.....++++++.++++.+.++...+|+++++
T Consensus       280 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~kvv~~~  325 (325)
T cd08253         280 AEAIAAGLADGALRPVIAREYPLEEAAAAHEAVESGGAIGKVVLDP  325 (325)
T ss_pred             HHHHHHHHHCCCccCccccEEcHHHHHHHHHHHHcCCCcceEEEeC
Confidence            8888889999999887778899999999999999988889999864

Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts

>cd08270 MDR4 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=99.90  E-value=8.7e-22  Score=150.81  Aligned_cols=187  Identities=24%  Similarity=0.281  Sum_probs=150.1

Q ss_pred             chhhHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHHH
Q 028523            2 PGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAAL   81 (208)
Q Consensus         2 ~~~tA~~~l~~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~~   81 (208)
                      +++|||+++...... +|++++|+|++|++|++++++++..|++|+.+++++++.+.++ ++|++.++...+  +     
T Consensus       117 ~~~ta~~~~~~~~~~-~~~~vli~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~g~~~~~~~~~--~-----  187 (305)
T cd08270         117 AGVTALRALRRGGPL-LGRRVLVTGASGGVGRFAVQLAALAGAHVVAVVGSPARAEGLR-ELGAAEVVVGGS--E-----  187 (305)
T ss_pred             HHHHHHHHHHHhCCC-CCCEEEEECCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-HcCCcEEEeccc--c-----
Confidence            467999999777655 5999999999999999999999999999999999999999999 799876553321  1     


Q ss_pred             HhHCCCCccEEEeCCCchhHHHHHHhhccCCEEEEEecccccCCCCCCCccchHHHhh--cceeEEEeeccccccchHHH
Q 028523           82 KRYFPEGINIYFENVGGKMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCLIS--KRIRMEGFLVPDYFHLYPKF  159 (208)
Q Consensus        82 ~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~  159 (208)
                        ..++++|+++|++|+..+..++++|+++|+++.+|....     .....+...+..  ++.++.++.... +....+.
T Consensus       188 --~~~~~~d~vl~~~g~~~~~~~~~~l~~~G~~v~~g~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~  259 (305)
T cd08270         188 --LSGAPVDLVVDSVGGPQLARALELLAPGGTVVSVGSSSG-----EPAVFNPAAFVGGGGGRRLYTFFLYD-GEPLAAD  259 (305)
T ss_pred             --ccCCCceEEEECCCcHHHHHHHHHhcCCCEEEEEeccCC-----CcccccHHHHhcccccceEEEEEccC-HHHHHHH
Confidence              122369999999998889999999999999999987541     112223333333  477887777653 2334567


Q ss_pred             HHHHHHHHHCCCceeeeeeeecCCcHHHHHHHHhcCCccceEEEEe
Q 028523          160 LEMMIPRIKEGKIVYVEDKAEGLESAPAALVGLFSGRNVGKQVVEV  205 (208)
Q Consensus       160 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~  205 (208)
                      +..+++++.++.+++.+.+++++++++++++.+.++...||+|+++
T Consensus       260 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvi~~  305 (305)
T cd08270         260 LARLLGLVAAGRLDPRIGWRGSWTEIDEAAEALLARRFRGKAVLDV  305 (305)
T ss_pred             HHHHHHHHHCCCccceeccEEcHHHHHHHHHHHHcCCCCceEEEeC
Confidence            8899999999999987778899999999999999999889999874

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>PRK09422 ethanol-active dehydrogenase/acetaldehyde-active reductase; Provisional

Probab=99.90  E-value=1.1e-21  Score=152.42  Aligned_cols=189  Identities=24%  Similarity=0.323  Sum_probs=151.5

Q ss_pred             chhhHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHH
Q 028523            2 PGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLV-GCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAA   80 (208)
Q Consensus         2 ~~~tA~~~l~~~~~~~~g~~vli~ga~g~vG~~a~qla~~~-g~~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~   80 (208)
                      +++|||+++ ..+.+++|++|+|+| +|++|++++|+++.. |++|+++++++++.+.++ ++|++.+++++..+++...
T Consensus       147 ~~~ta~~~~-~~~~~~~g~~vlV~g-~g~vG~~~~~la~~~~g~~v~~~~~~~~~~~~~~-~~g~~~v~~~~~~~~~~~~  223 (338)
T PRK09422        147 AGVTTYKAI-KVSGIKPGQWIAIYG-AGGLGNLALQYAKNVFNAKVIAVDINDDKLALAK-EVGADLTINSKRVEDVAKI  223 (338)
T ss_pred             chhHHHHHH-HhcCCCCCCEEEEEC-CcHHHHHHHHHHHHhCCCeEEEEeCChHHHHHHH-HcCCcEEecccccccHHHH
Confidence            568999998 778999999999999 599999999999984 999999999999999998 8999889888652266677


Q ss_pred             HHhHCCCCccE-EEeCCCchhHHHHHHhhccCCEEEEEecccccCCCCCCCccchHHHhhcceeEEEeeccccccchHHH
Q 028523           81 LKRYFPEGINI-YFENVGGKMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCLISKRIRMEGFLVPDYFHLYPKF  159 (208)
Q Consensus        81 ~~~~~~~~~d~-v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (208)
                      +++..+ ++|. ++++.++..+..++++++++|+++.+|....      ....+......+..++.++....     .+.
T Consensus       224 v~~~~~-~~d~vi~~~~~~~~~~~~~~~l~~~G~~v~~g~~~~------~~~~~~~~~~~~~~~~~~~~~~~-----~~~  291 (338)
T PRK09422        224 IQEKTG-GAHAAVVTAVAKAAFNQAVDAVRAGGRVVAVGLPPE------SMDLSIPRLVLDGIEVVGSLVGT-----RQD  291 (338)
T ss_pred             HHHhcC-CCcEEEEeCCCHHHHHHHHHhccCCCEEEEEeeCCC------CceecHHHHhhcCcEEEEecCCC-----HHH
Confidence            777665 6884 4555557889999999999999999986531      11223444555677776654332     456


Q ss_pred             HHHHHHHHHCCCceeeeeeeecCCcHHHHHHHHhcCCccceEEEEec
Q 028523          160 LEMMIPRIKEGKIVYVEDKAEGLESAPAALVGLFSGRNVGKQVVEVA  206 (208)
Q Consensus       160 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~~  206 (208)
                      ++++++++.+|.+.+.+. .+++++++++++.+.++...||+++.+.
T Consensus       292 ~~~~~~l~~~g~l~~~v~-~~~~~~~~~a~~~~~~~~~~gkvvv~~~  337 (338)
T PRK09422        292 LEEAFQFGAEGKVVPKVQ-LRPLEDINDIFDEMEQGKIQGRMVIDFT  337 (338)
T ss_pred             HHHHHHHHHhCCCCccEE-EEcHHHHHHHHHHHHcCCccceEEEecC
Confidence            888999999999877655 5899999999999999998999998753

>cd08278 benzyl_alcohol_DH Benzyl alcohol dehydrogenase

Probab=99.90  E-value=9.3e-22  Score=154.29  Aligned_cols=193  Identities=22%  Similarity=0.331  Sum_probs=155.5

Q ss_pred             chhhHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHH
Q 028523            2 PGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGC-YVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAA   80 (208)
Q Consensus         2 ~~~tA~~~l~~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g~-~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~   80 (208)
                      +++|||+++...+.+++|++|+|+| +|++|++++|+|+..|+ +++++++++++.+.++ ++|++.++++++. ++.+.
T Consensus       170 ~~~ta~~~~~~~~~~~~g~~vlI~g-~g~vG~~~~~la~~~G~~~v~~~~~~~~k~~~~~-~~g~~~~i~~~~~-~~~~~  246 (365)
T cd08278         170 GIQTGAGAVLNVLKPRPGSSIAVFG-AGAVGLAAVMAAKIAGCTTIIAVDIVDSRLELAK-ELGATHVINPKEE-DLVAA  246 (365)
T ss_pred             hhhhhhHHHhhhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHH-HcCCcEEecCCCc-CHHHH
Confidence            5788999988888999999999997 59999999999999999 6888888988988888 8999999988776 77777


Q ss_pred             HHhHCCCCccEEEeCCCc-hhHHHHHHhhccCCEEEEEecccccCCCCCCCccchHHHhhcceeEEEeeccccccchHHH
Q 028523           81 LKRYFPEGINIYFENVGG-KMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCLISKRIRMEGFLVPDYFHLYPKF  159 (208)
Q Consensus        81 ~~~~~~~~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (208)
                      +.+.++.++|+++||+|+ ..+..++++++++|+++.+|....    ......+...++.+++++.++.....  ...+.
T Consensus       247 v~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~  320 (365)
T cd08278         247 IREITGGGVDYALDTTGVPAVIEQAVDALAPRGTLALVGAPPP----GAEVTLDVNDLLVSGKTIRGVIEGDS--VPQEF  320 (365)
T ss_pred             HHHHhCCCCcEEEECCCCcHHHHHHHHHhccCCEEEEeCcCCC----CCccccCHHHHhhcCceEEEeecCCc--ChHHH
Confidence            877774489999999984 788999999999999999987531    11223445555578888887765332  11466


Q ss_pred             HHHHHHHHHCCCcee-eeeeeecCCcHHHHHHHHhcCCccceEEEE
Q 028523          160 LEMMIPRIKEGKIVY-VEDKAEGLESAPAALVGLFSGRNVGKQVVE  204 (208)
Q Consensus       160 ~~~~~~~~~~g~~~~-~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~  204 (208)
                      +.++++++.+|.+.+ .+...++++++.+|++.+.++... |+||+
T Consensus       321 ~~~~~~~l~~g~l~~~~~~~~~~l~~~~~a~~~~~~~~~~-k~~~~  365 (365)
T cd08278         321 IPRLIELYRQGKFPFDKLVTFYPFEDINQAIADSESGKVI-KPVLR  365 (365)
T ss_pred             HHHHHHHHHcCCCChHHheEEecHHHHHHHHHHHHCCCce-EEEEC
Confidence            788999999999864 344579999999999999887754 77764

Benzyl alcohol dehydrogenase is similar to liver alcohol dehydrogenase, but has some amino acid substitutions near the active site, which may determine the enzyme's specificity of oxidizing aromatic substrates. Also known as aryl-alcohol dehydrogenases, they catalyze the conversion of an aromatic alcohol + NAD+ to an aromatic aldehyde + NADH + H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononu

>TIGR01202 bchC 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase

Probab=99.90  E-value=2.2e-22  Score=154.34  Aligned_cols=174  Identities=16%  Similarity=0.192  Sum_probs=132.9

Q ss_pred             hhhHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCE-EEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHHH
Q 028523            3 GMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCY-VVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAAL   81 (208)
Q Consensus         3 ~~tA~~~l~~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g~~-v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~~   81 (208)
                      .+|||+++.+ . ..++++++|+| +|++|++++|+|+++|++ |++++.++++++.+. .+   .++|+.+  .     
T Consensus       131 ~~~a~~~~~~-~-~~~~~~vlV~G-~G~vG~~a~q~ak~~G~~~v~~~~~~~~rl~~a~-~~---~~i~~~~--~-----  196 (308)
T TIGR01202       131 AATARHAVAG-A-EVKVLPDLIVG-HGTLGRLLARLTKAAGGSPPAVWETNPRRRDGAT-GY---EVLDPEK--D-----  196 (308)
T ss_pred             HHHHHHHHHh-c-ccCCCcEEEEC-CCHHHHHHHHHHHHcCCceEEEeCCCHHHHHhhh-hc---cccChhh--c-----
Confidence            5789999955 3 34688999998 599999999999999996 555666666665554 33   4454422  1     


Q ss_pred             HhHCCCCccEEEeCCCc-hhHHHHHHhhccCCEEEEEecccccCCCCCCCccchHHHhhcceeEEEeeccccccchHHHH
Q 028523           82 KRYFPEGINIYFENVGG-KMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCLISKRIRMEGFLVPDYFHLYPKFL  160 (208)
Q Consensus        82 ~~~~~~~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (208)
                         .+.++|++|||+|+ ..++.++++++++|+++.+|....      ....+....+.+++++.++....     .+.+
T Consensus       197 ---~~~g~Dvvid~~G~~~~~~~~~~~l~~~G~iv~~G~~~~------~~~~~~~~~~~~~~~i~~~~~~~-----~~~~  262 (308)
T TIGR01202       197 ---PRRDYRAIYDASGDPSLIDTLVRRLAKGGEIVLAGFYTE------PVNFDFVPAFMKEARLRIAAEWQ-----PGDL  262 (308)
T ss_pred             ---cCCCCCEEEECCCCHHHHHHHHHhhhcCcEEEEEeecCC------CcccccchhhhcceEEEEecccc-----hhHH
Confidence               12379999999997 468999999999999999997542      12234455667788887765432     5678


Q ss_pred             HHHHHHHHCCCcee--eeeeeecCCcHHHHHHHHhcCCccceEEEE
Q 028523          161 EMMIPRIKEGKIVY--VEDKAEGLESAPAALVGLFSGRNVGKQVVE  204 (208)
Q Consensus       161 ~~~~~~~~~g~~~~--~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~  204 (208)
                      +++++++.+|.+++  .++++|+|+++.+|++.+.++...+|++|+
T Consensus       263 ~~~~~l~~~g~i~~~~~it~~~~l~~~~~A~~~~~~~~~~~Kv~~~  308 (308)
T TIGR01202       263 HAVRELIESGALSLDGLITHQRPASDAAEAYMTAFSDPDCLKMILD  308 (308)
T ss_pred             HHHHHHHHcCCCChhhccceeecHHHHHHHHHHHhcCcCceEEEeC
Confidence            99999999999976  478899999999999988877777899874

>cd08249 enoyl_reductase_like enoyl_reductase_like

Probab=99.90  E-value=6.7e-22  Score=153.68  Aligned_cols=189  Identities=21%  Similarity=0.251  Sum_probs=150.7

Q ss_pred             chhhHHHHHHHhcCC----------CCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeEec
Q 028523            2 PGMTAYAGFFEVCSP----------KQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNY   71 (208)
Q Consensus         2 ~~~tA~~~l~~~~~~----------~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~v~~~   71 (208)
                      +++|||+++.+..++          .++++++|+|++|++|++++|+++..|++|++++ ++++.+.++ ++|++.++++
T Consensus       128 ~~~ta~~~l~~~~~~~~~~~~~~~~~~~~~vlI~ga~g~vg~~~~~~a~~~G~~v~~~~-~~~~~~~~~-~~g~~~v~~~  205 (339)
T cd08249         128 GLVTAALALFQKLGLPLPPPKPSPASKGKPVLIWGGSSSVGTLAIQLAKLAGYKVITTA-SPKNFDLVK-SLGADAVFDY  205 (339)
T ss_pred             HHHHHHHHHhccccCCCCCCCCCCCCCCCEEEEEcChhHHHHHHHHHHHHcCCeEEEEE-CcccHHHHH-hcCCCEEEEC
Confidence            578999998776655          7899999999999999999999999999999988 668888897 8999999998


Q ss_pred             CCCccHHHHHHhHCCCCccEEEeCCCc-hhHHHHHHhhcc--CCEEEEEecccccCCCCCCCccchHHHhhcceeEEE--
Q 028523           72 KEEPDLDAALKRYFPEGINIYFENVGG-KMLDAVLLNMRI--QGRITLCGMISQYNNDKPEGVHNLTCLISKRIRMEG--  146 (208)
Q Consensus        72 ~~~~~~~~~~~~~~~~~~d~v~d~~g~-~~~~~~~~~l~~--~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~--  146 (208)
                      ++. ++.+.+++..++++|+++|++|+ ..+..+++++++  +|+++.+|......            .+..+..+..  
T Consensus       206 ~~~-~~~~~l~~~~~~~~d~vl~~~g~~~~~~~~~~~l~~~~~g~~v~~g~~~~~~------------~~~~~~~~~~~~  272 (339)
T cd08249         206 HDP-DVVEDIRAATGGKLRYALDCISTPESAQLCAEALGRSGGGKLVSLLPVPEET------------EPRKGVKVKFVL  272 (339)
T ss_pred             CCc-hHHHHHHHhcCCCeeEEEEeeccchHHHHHHHHHhccCCCEEEEecCCCccc------------cCCCCceEEEEE
Confidence            876 78888877766689999999997 899999999999  99999998754311            0111222222  


Q ss_pred             -eecc----ccccchHHHHHHHHHHHHCCCceeeeeeeec--CCcHHHHHHHHhcCC-ccceEEEEe
Q 028523          147 -FLVP----DYFHLYPKFLEMMIPRIKEGKIVYVEDKAEG--LESAPAALVGLFSGR-NVGKQVVEV  205 (208)
Q Consensus       147 -~~~~----~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~--~~~~~~a~~~~~~~~-~~gk~vv~~  205 (208)
                       ....    ..+......+..+.+++.++.+.+....+++  ++++.+|++.+.+++ ..+|+|+++
T Consensus       273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~kvvv~~  339 (339)
T cd08249         273 GYTVFGEIPEDREFGEVFWKYLPELLEEGKLKPHPVRVVEGGLEGVQEGLDLLRKGKVSGEKLVVRL  339 (339)
T ss_pred             eeeecccccccccchHHHHHHHHHHHHcCCccCCCceecCCcHHHHHHHHHHHHCCCccceEEEEeC
Confidence             1111    1123334567889999999999987666777  999999999999998 889999874

Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol de

>cd08251 polyketide_synthase polyketide synthase

Probab=99.90  E-value=1.1e-21  Score=149.74  Aligned_cols=194  Identities=22%  Similarity=0.338  Sum_probs=156.3

Q ss_pred             chhhHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHHH
Q 028523            2 PGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAAL   81 (208)
Q Consensus         2 ~~~tA~~~l~~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~~   81 (208)
                      +++|||+++ +.+.+++|++++|+++++++|++++|+++.+|++|+++++++++.+.++ ++|++.++++.+. ++...+
T Consensus       105 ~~~ta~~~l-~~~~~~~g~~vli~~~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~g~~~~~~~~~~-~~~~~i  181 (303)
T cd08251         105 VFLTVIDAF-ARAGLAKGEHILIQTATGGTGLMAVQLARLKGAEIYATASSDDKLEYLK-QLGVPHVINYVEE-DFEEEI  181 (303)
T ss_pred             HHHHHHHHH-HhcCCCCCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHH-HcCCCEEEeCCCc-cHHHHH
Confidence            467899998 5789999999999999999999999999999999999999999999997 8999999988776 777788


Q ss_pred             HhHCCC-CccEEEeCCCchhHHHHHHhhccCCEEEEEecccccCCCCCCCccchHHHhhcceeEEEeecccc----ccch
Q 028523           82 KRYFPE-GINIYFENVGGKMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCLISKRIRMEGFLVPDY----FHLY  156 (208)
Q Consensus        82 ~~~~~~-~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~  156 (208)
                      ...+++ ++|.++|++++......+++++++|+++.+|.....    ....... ..+.+++.+....+...    +...
T Consensus       182 ~~~~~~~~~d~v~~~~~~~~~~~~~~~l~~~g~~v~~~~~~~~----~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~  256 (303)
T cd08251         182 MRLTGGRGVDVVINTLSGEAIQKGLNCLAPGGRYVEIAMTALK----SAPSVDL-SVLSNNQSFHSVDLRKLLLLDPEFI  256 (303)
T ss_pred             HHHcCCCCceEEEECCcHHHHHHHHHHhccCcEEEEEeccCCC----ccCccCh-hHhhcCceEEEEehHHhhhhCHHHH
Confidence            877776 899999999988888999999999999999865421    1111111 23444555544443222    2334


Q ss_pred             HHHHHHHHHHHHCCCceeeeeeeecCCcHHHHHHHHhcCCccceEEE
Q 028523          157 PKFLEMMIPRIKEGKIVYVEDKAEGLESAPAALVGLFSGRNVGKQVV  203 (208)
Q Consensus       157 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv  203 (208)
                      .+.+.++.+++.+|.+++...+.++++++.++++.+.++...+|+++
T Consensus       257 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~  303 (303)
T cd08251         257 ADYQAEMVSLVEEGELRPTVSRIFPFDDIGEAYRYLSDRENIGKVVV  303 (303)
T ss_pred             HHHHHHHHHHHHCCCccCCCceEEcHHHHHHHHHHHHhCCCcceEeC
Confidence            56788899999999998877788999999999999999888888874

Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde a

>cd08237 ribitol-5-phosphate_DH ribitol-5-phosphate dehydrogenase

Probab=99.90  E-value=5.6e-22  Score=154.13  Aligned_cols=179  Identities=17%  Similarity=0.169  Sum_probs=134.6

Q ss_pred             chhhHHHHHHHh--cCCCCCCEEEEecCCchHHHHHHHHHHH-cCC-EEEEEeCCHHHHHHHHHhcCCCeeEecCCCccH
Q 028523            2 PGMTAYAGFFEV--CSPKQGEYVFVSAASGAVGQLVGQFAKL-VGC-YVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDL   77 (208)
Q Consensus         2 ~~~tA~~~l~~~--~~~~~g~~vli~ga~g~vG~~a~qla~~-~g~-~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~   77 (208)
                      +++|||+++...  +.+++|++|+|+|+ |++|++++|+++. .|+ +|+++++++++++.++ +++.+..++     ++
T Consensus       145 ~~~~a~~a~~~~~~~~~~~g~~VlV~G~-G~vGl~~~~~a~~~~g~~~vi~~~~~~~k~~~a~-~~~~~~~~~-----~~  217 (341)
T cd08237         145 LVSVGVHAISRFEQIAHKDRNVIGVWGD-GNLGYITALLLKQIYPESKLVVFGKHQEKLDLFS-FADETYLID-----DI  217 (341)
T ss_pred             hHHHHHHHHHHHhhcCCCCCCEEEEECC-CHHHHHHHHHHHHhcCCCcEEEEeCcHhHHHHHh-hcCceeehh-----hh
Confidence            457889988643  45688999999995 9999999999986 554 8999999999999988 666543221     11


Q ss_pred             HHHHHhHCCC-CccEEEeCCCc----hhHHHHHHhhccCCEEEEEecccccCCCCCCCccchHHHhhcceeEEEeecccc
Q 028523           78 DAALKRYFPE-GINIYFENVGG----KMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCLISKRIRMEGFLVPDY  152 (208)
Q Consensus        78 ~~~~~~~~~~-~~d~v~d~~g~----~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  152 (208)
                      .       .. ++|++||++|+    ..+..++++++++|+++.+|...+      ....+...++.+++++.|+.... 
T Consensus       218 ~-------~~~g~d~viD~~G~~~~~~~~~~~~~~l~~~G~iv~~G~~~~------~~~~~~~~~~~k~~~i~g~~~~~-  283 (341)
T cd08237         218 P-------EDLAVDHAFECVGGRGSQSAINQIIDYIRPQGTIGLMGVSEY------PVPINTRMVLEKGLTLVGSSRST-  283 (341)
T ss_pred             h-------hccCCcEEEECCCCCccHHHHHHHHHhCcCCcEEEEEeecCC------CcccCHHHHhhCceEEEEecccC-
Confidence            1       12 69999999994    368899999999999999997432      12344556778999999876533 


Q ss_pred             ccchHHHHHHHHHHHHCC-----CceeeeeeeecCCcH---HHHHHHHhcCCccceEEEEec
Q 028523          153 FHLYPKFLEMMIPRIKEG-----KIVYVEDKAEGLESA---PAALVGLFSGRNVGKQVVEVA  206 (208)
Q Consensus       153 ~~~~~~~~~~~~~~~~~g-----~~~~~~~~~~~~~~~---~~a~~~~~~~~~~gk~vv~~~  206 (208)
                          .+.++++++++.+|     .+++.++++|+++++   .++++.+.++ ..||+||.++
T Consensus       284 ----~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~l~~l~~~~~a~~~~~~~-~~gKvvi~~~  340 (341)
T cd08237         284 ----REDFERAVELLSRNPEVAEYLRKLVGGVFPVRSINDIHRAFESDLTN-SWGKTVMEWE  340 (341)
T ss_pred             ----HHHHHHHHHHHHhCCcccCChHHHhccccccccHHHHHHHHHHHhhc-CcceEEEEee
Confidence                45678899999998     567778889998655   5555544444 6799999875

NAD-linked ribitol-5-phosphate dehydrogenase, a member of the MDR/zinc-dependent alcohol dehydrogenase-like family, oxidizes the phosphate ester of ribitol-5-phosphate to xylulose-5-phosphate of the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (

>cd08266 Zn_ADH_like1 Alcohol dehydrogenases of the MDR family

Probab=99.90  E-value=2.7e-21  Score=150.05  Aligned_cols=192  Identities=28%  Similarity=0.390  Sum_probs=160.2

Q ss_pred             chhhHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHHH
Q 028523            2 PGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAAL   81 (208)
Q Consensus         2 ~~~tA~~~l~~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~~   81 (208)
                      ++.|||+++.+.+.+.++++++|+|+++++|++++++++..|++++++++++++.+.++ .++.+.+++..+. +....+
T Consensus       150 ~~~~a~~~l~~~~~~~~~~~vlI~g~~~~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~-~~~~~~~~~~~~~-~~~~~~  227 (342)
T cd08266         150 TFLTAWHMLVTRARLRPGETVLVHGAGSGVGSAAIQIAKLFGATVIATAGSEDKLERAK-ELGADYVIDYRKE-DFVREV  227 (342)
T ss_pred             HHHHHHHHHHHhcCCCCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-HcCCCeEEecCCh-HHHHHH
Confidence            45789999888889999999999999999999999999999999999999999988887 7888777777655 566666


Q ss_pred             HhHCCC-CccEEEeCCCchhHHHHHHhhccCCEEEEEecccccCCCCCCCccchHHHhhcceeEEEeeccccccchHHHH
Q 028523           82 KRYFPE-GINIYFENVGGKMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCLISKRIRMEGFLVPDYFHLYPKFL  160 (208)
Q Consensus        82 ~~~~~~-~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (208)
                      .+...+ ++|+++++.|...+...+++++++|+++.++.....     .........+.+++++.+.....     ...+
T Consensus       228 ~~~~~~~~~d~~i~~~g~~~~~~~~~~l~~~G~~v~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~-----~~~~  297 (342)
T cd08266         228 RELTGKRGVDVVVEHVGAATWEKSLKSLARGGRLVTCGATTGY-----EAPIDLRHVFWRQLSILGSTMGT-----KAEL  297 (342)
T ss_pred             HHHhCCCCCcEEEECCcHHHHHHHHHHhhcCCEEEEEecCCCC-----CCCcCHHHHhhcceEEEEEecCC-----HHHH
Confidence            666655 899999999988899999999999999999876531     11233345577888888777544     4568


Q ss_pred             HHHHHHHHCCCceeeeeeeecCCcHHHHHHHHhcCCccceEEEEe
Q 028523          161 EMMIPRIKEGKIVYVEDKAEGLESAPAALVGLFSGRNVGKQVVEV  205 (208)
Q Consensus       161 ~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~  205 (208)
                      .++++++.++.+.+.+...++++++.++++.+.++...+|+++++
T Consensus       298 ~~~~~~l~~~~l~~~~~~~~~~~~~~~a~~~~~~~~~~~kvv~~~  342 (342)
T cd08266         298 DEALRLVFRGKLKPVIDSVFPLEEAAEAHRRLESREQFGKIVLTP  342 (342)
T ss_pred             HHHHHHHHcCCcccceeeeEcHHHHHHHHHHHHhCCCCceEEEeC
Confidence            889999999999888888899999999999999888889999863

This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone

>cd08283 FDH_like_1 Glutathione-dependent formaldehyde dehydrogenase related proteins, child 1

Probab=99.90  E-value=1.7e-21  Score=153.87  Aligned_cols=191  Identities=20%  Similarity=0.264  Sum_probs=153.7

Q ss_pred             chhhHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHH
Q 028523            2 PGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGC-YVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAA   80 (208)
Q Consensus         2 ~~~tA~~~l~~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g~-~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~   80 (208)
                      +++|||+++ +.+++.+|++|+|+| +|++|++++|+|+..|+ +|+++++++++.+.++ +++...++++.+.+++...
T Consensus       169 ~~~ta~~~l-~~~~~~~g~~VlV~g-~G~vG~~~~~la~~~g~~~vi~~~~~~~~~~~~~-~~~~~~vi~~~~~~~~~~~  245 (386)
T cd08283         169 ILPTGYHAA-ELAEVKPGDTVAVWG-CGPVGLFAARSAKLLGAERVIAIDRVPERLEMAR-SHLGAETINFEEVDDVVEA  245 (386)
T ss_pred             chhhhHHHH-hhccCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHH-HcCCcEEEcCCcchHHHHH
Confidence            468999999 778999999999997 59999999999999998 6999999999999999 6744467777664137777


Q ss_pred             HHhHCCC-CccEEEeCCCch----------------------hHHHHHHhhccCCEEEEEecccccCCCCCCCccchHHH
Q 028523           81 LKRYFPE-GINIYFENVGGK----------------------MLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCL  137 (208)
Q Consensus        81 ~~~~~~~-~~d~v~d~~g~~----------------------~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~  137 (208)
                      +.+.+++ ++|++||++|++                      .+..++++++++|+++.+|....     ..........
T Consensus       246 l~~~~~~~~~D~vld~vg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~iv~~g~~~~-----~~~~~~~~~~  320 (386)
T cd08283         246 LRELTGGRGPDVCIDAVGMEAHGSPLHKAEQALLKLETDRPDALREAIQAVRKGGTVSIIGVYGG-----TVNKFPIGAA  320 (386)
T ss_pred             HHHHcCCCCCCEEEECCCCcccccccccccccccccccCchHHHHHHHHHhccCCEEEEEcCCCC-----CcCccCHHHH
Confidence            8887776 899999999743                      57889999999999999987542     1122334456


Q ss_pred             hhcceeEEEeeccccccchHHHHHHHHHHHHCCCceee--eeeeecCCcHHHHHHHHhcCC-ccceEEEEe
Q 028523          138 ISKRIRMEGFLVPDYFHLYPKFLEMMIPRIKEGKIVYV--EDKAEGLESAPAALVGLFSGR-NVGKQVVEV  205 (208)
Q Consensus       138 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~--~~~~~~~~~~~~a~~~~~~~~-~~gk~vv~~  205 (208)
                      +.+++++.+....     ..+.+.++++++.++.+.+.  +.++++++++.+|++.+.++. ..+|+||++
T Consensus       321 ~~~~~~i~~~~~~-----~~~~~~~~~~~l~~g~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~k~~~~~  386 (386)
T cd08283         321 MNKGLTLRMGQTH-----VQRYLPRLLELIESGELDPSFIITHRLPLEDAPEAYKIFDKKEDGCIKVVLKP  386 (386)
T ss_pred             HhCCcEEEeccCC-----chHHHHHHHHHHHcCCCChhHceEEEecHHHHHHHHHHHHhCCCCeEEEEecC
Confidence            7888888876532     25678889999999999863  567899999999999998887 568999863

Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. T

>cd05278 FDH_like Formaldehyde dehydrogenases

Probab=99.90  E-value=1.1e-21  Score=152.87  Aligned_cols=190  Identities=22%  Similarity=0.236  Sum_probs=152.9

Q ss_pred             chhhHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHH
Q 028523            2 PGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGC-YVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAA   80 (208)
Q Consensus         2 ~~~tA~~~l~~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g~-~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~   80 (208)
                      +++|||+++ ...++++|++|+|.| +|++|++++|+|+.+|. +++++++++++.+.++ ++|++.++++++. ++.+.
T Consensus       152 ~~~ta~~~~-~~~~~~~~~~VlI~g-~g~vg~~~iqlak~~g~~~v~~~~~~~~~~~~~~-~~g~~~vi~~~~~-~~~~~  227 (347)
T cd05278         152 ILPTGFHGA-ELAGIKPGSTVAVIG-AGPVGLCAVAGARLLGAARIIAVDSNPERLDLAK-EAGATDIINPKNG-DIVEQ  227 (347)
T ss_pred             hhhheeehh-hhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHH-HhCCcEEEcCCcc-hHHHH
Confidence            578999998 678899999999976 59999999999999997 8989888888888888 8999899998876 77777


Q ss_pred             HHhHCCC-CccEEEeCCCc-hhHHHHHHhhccCCEEEEEecccccCCCCCCCccchHHHhhcceeEEEeeccccccchHH
Q 028523           81 LKRYFPE-GINIYFENVGG-KMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCLISKRIRMEGFLVPDYFHLYPK  158 (208)
Q Consensus        81 ~~~~~~~-~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  158 (208)
                      +++.+++ ++|++||++++ ..+..++++|+++|+++.+|.....     .........+.+++++.+.....     .+
T Consensus       228 i~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~-----~~  297 (347)
T cd05278         228 ILELTGGRGVDCVIEAVGFEETFEQAVKVVRPGGTIANVGVYGKP-----DPLPLLGEWFGKNLTFKTGLVPV-----RA  297 (347)
T ss_pred             HHHHcCCCCCcEEEEccCCHHHHHHHHHHhhcCCEEEEEcCCCCC-----cccCccchhhhceeEEEeeccCc-----hh
Confidence            8877765 89999999996 6889999999999999999864321     10011223346677776654322     56


Q ss_pred             HHHHHHHHHHCCCceee--eeeeecCCcHHHHHHHHhcCCc-cceEEEEe
Q 028523          159 FLEMMIPRIKEGKIVYV--EDKAEGLESAPAALVGLFSGRN-VGKQVVEV  205 (208)
Q Consensus       159 ~~~~~~~~~~~g~~~~~--~~~~~~~~~~~~a~~~~~~~~~-~gk~vv~~  205 (208)
                      .++++++++.++.+++.  +...++++++.++++.+..+.. .+|+|+++
T Consensus       298 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~vv~~  347 (347)
T cd05278         298 RMPELLDLIEEGKIDPSKLITHRFPLDDILKAYRLFDNKPDGCIKVVIRP  347 (347)
T ss_pred             HHHHHHHHHHcCCCChhHcEEEEecHHHHHHHHHHHhcCCCCceEEEecC
Confidence            78899999999999864  4577899999999999988876 68998763

Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (aka ADH3) may be the ancestral form of alcohol dehydrogenase, which evolved to detoxify formaldehyde. This CD contains glutathione dependant FDH, glutathione independent FDH, and related alcohol dehydrogenases. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typicall

>cd08235 iditol_2_DH_like L-iditol 2-dehydrogenase

Probab=99.90  E-value=2.1e-21  Score=151.14  Aligned_cols=189  Identities=22%  Similarity=0.249  Sum_probs=153.0

Q ss_pred             chhhHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCE-EEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHH
Q 028523            2 PGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCY-VVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAA   80 (208)
Q Consensus         2 ~~~tA~~~l~~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g~~-v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~   80 (208)
                      ++.|||+++.. .++++|++|+|+| +|++|++++|+|+..|++ |+++++++++.+.++ ++|.+.++++++. ++.+.
T Consensus       150 ~~~~a~~~l~~-~~~~~g~~VlV~g-~g~vg~~~~~la~~~g~~~v~~~~~s~~~~~~~~-~~g~~~~~~~~~~-~~~~~  225 (343)
T cd08235         150 PLACCINAQRK-AGIKPGDTVLVIG-AGPIGLLHAMLAKASGARKVIVSDLNEFRLEFAK-KLGADYTIDAAEE-DLVEK  225 (343)
T ss_pred             HHHHHHHHHHh-cCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHH-HhCCcEEecCCcc-CHHHH
Confidence            46789999965 4899999999997 699999999999999998 999998999999988 8999889998877 78888


Q ss_pred             HHhHCCC-CccEEEeCCCc-hhHHHHHHhhccCCEEEEEecccccCCCCCCCccchHHHhhcceeEEEeeccccccchHH
Q 028523           81 LKRYFPE-GINIYFENVGG-KMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCLISKRIRMEGFLVPDYFHLYPK  158 (208)
Q Consensus        81 ~~~~~~~-~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  158 (208)
                      +.+..++ ++|+++||.++ ..+...+++++++|+++.++.....    ............+++.+.+.....     .+
T Consensus       226 i~~~~~~~~vd~vld~~~~~~~~~~~~~~l~~~g~~v~~~~~~~~----~~~~~~~~~~~~~~~~l~~~~~~~-----~~  296 (343)
T cd08235         226 VRELTDGRGADVVIVATGSPEAQAQALELVRKGGRILFFGGLPKG----STVNIDPNLIHYREITITGSYAAS-----PE  296 (343)
T ss_pred             HHHHhCCcCCCEEEECCCChHHHHHHHHHhhcCCEEEEEeccCCC----CCcccCHHHHhhCceEEEEEecCC-----hh
Confidence            8877766 79999999995 5888999999999999999875421    112223344555666666554332     45


Q ss_pred             HHHHHHHHHHCCCcee--eeeeeecCCcHHHHHHHHhcCCccceEEEE
Q 028523          159 FLEMMIPRIKEGKIVY--VEDKAEGLESAPAALVGLFSGRNVGKQVVE  204 (208)
Q Consensus       159 ~~~~~~~~~~~g~~~~--~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~  204 (208)
                      .++++++++.++.+.+  .+..+++++++.++++.+.+++ .+|+|++
T Consensus       297 ~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~-~~k~vi~  343 (343)
T cd08235         297 DYKEALELIASGKIDVKDLITHRFPLEDIEEAFELAADGK-SLKIVIT  343 (343)
T ss_pred             hHHHHHHHHHcCCCChHHheeeEeeHHHHHHHHHHHhCCC-cEEEEeC
Confidence            6788899999999873  4567899999999999999999 8999874

Putative L-iditol 2-dehydrogenase based on annotation of some members in this subgroup. L-iditol 2-dehydrogenase catalyzes the NAD+-dependent conversion of L-iditol to L-sorbose in fructose and mannose metabolism. This enzyme is related to sorbitol dehydrogenase, alcohol dehydrogenase, and other medium chain dehydrogenase/reductases. The zinc-dependent alcohol dehydrogenase (ADH-Zn)-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) to highlight its broad range of activities and to distinguish from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal GroES-like catalytic domain. The MDR group contains a host of activities, i

>cd08256 Zn_ADH2 Alcohol dehydrogenases of the MDR family

Probab=99.89  E-value=1.6e-21  Score=152.17  Aligned_cols=186  Identities=21%  Similarity=0.225  Sum_probs=149.0

Q ss_pred             chhhHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHH
Q 028523            2 PGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGC-YVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAA   80 (208)
Q Consensus         2 ~~~tA~~~l~~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g~-~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~   80 (208)
                      +++|+|+++ +.+++++|++|+| +|+|++|++++|+|+.+|+ .++++++++++.+.+. ++|++.++++.+. ++.+.
T Consensus       159 ~~~ta~~a~-~~~~~~~g~~vlI-~g~g~vG~~~~~~a~~~G~~~v~~~~~~~~~~~~~~-~~g~~~v~~~~~~-~~~~~  234 (350)
T cd08256         159 PLACALHAV-DRANIKFDDVVVL-AGAGPLGLGMIGAARLKNPKKLIVLDLKDERLALAR-KFGADVVLNPPEV-DVVEK  234 (350)
T ss_pred             HHHHHHHHH-HhcCCCCCCEEEE-ECCCHHHHHHHHHHHHcCCcEEEEEcCCHHHHHHHH-HcCCcEEecCCCc-CHHHH
Confidence            567999998 7789999999999 5569999999999999998 5677787888888787 8999889888766 78788


Q ss_pred             HHhHCCC-CccEEEeCCCc-hhHHHHHHhhccCCEEEEEecccccCCCCCCCccchHHH-hhcceeEEEeeccccccchH
Q 028523           81 LKRYFPE-GINIYFENVGG-KMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCL-ISKRIRMEGFLVPDYFHLYP  157 (208)
Q Consensus        81 ~~~~~~~-~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~  157 (208)
                      +.+.+++ ++|+++|++|+ ..+..++++++++|+++.+|....      ......... ..+++++.++...      .
T Consensus       235 ~~~~~~~~~vdvvld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~------~~~~~~~~~~~~~~~~i~~~~~~------~  302 (350)
T cd08256         235 IKELTGGYGCDIYIEATGHPSAVEQGLNMIRKLGRFVEFSVFGD------PVTVDWSIIGDRKELDVLGSHLG------P  302 (350)
T ss_pred             HHHHhCCCCCCEEEECCCChHHHHHHHHHhhcCCEEEEEccCCC------CCccChhHhhcccccEEEEeccC------c
Confidence            8887776 89999999994 678899999999999999986431      111222222 2456666665543      2


Q ss_pred             HHHHHHHHHHHCCCceee--eeeeecCCcHHHHHHHHhcCCccceEEE
Q 028523          158 KFLEMMIPRIKEGKIVYV--EDKAEGLESAPAALVGLFSGRNVGKQVV  203 (208)
Q Consensus       158 ~~~~~~~~~~~~g~~~~~--~~~~~~~~~~~~a~~~~~~~~~~gk~vv  203 (208)
                      ..+.++++++.+|.+++.  +.++++++++.+|++.+++++..+|+|+
T Consensus       303 ~~~~~~~~~~~~g~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~~kvv~  350 (350)
T cd08256         303 YCYPIAIDLIASGRLPTDGIVTHQFPLEDFEEAFELMARGDDSIKVVL  350 (350)
T ss_pred             hhHHHHHHHHHcCCCChhHheEEEeEHHHHHHHHHHHHhCCCceEEeC
Confidence            357788999999999874  6788999999999999999888889874

This group has the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenases of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH,

>PRK13771 putative alcohol dehydrogenase; Provisional

Probab=99.89  E-value=1.6e-21  Score=151.20  Aligned_cols=187  Identities=27%  Similarity=0.352  Sum_probs=150.9

Q ss_pred             chhhHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHHH
Q 028523            2 PGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAAL   81 (208)
Q Consensus         2 ~~~tA~~~l~~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~~   81 (208)
                      ++.|||+++.+. .+.++++++|+|++|++|++++|+++..|++++++++++++.+.++ ++ ++.+++++   ++.+.+
T Consensus       147 ~~~~a~~~~~~~-~~~~~~~vlI~g~~g~~g~~~~~la~~~g~~vi~~~~~~~~~~~~~-~~-~~~~~~~~---~~~~~v  220 (334)
T PRK13771        147 VTGMVYRGLRRA-GVKKGETVLVTGAGGGVGIHAIQVAKALGAKVIAVTSSESKAKIVS-KY-ADYVIVGS---KFSEEV  220 (334)
T ss_pred             hHHHHHHHHHhc-CCCCCCEEEEECCCccHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-HH-HHHhcCch---hHHHHH
Confidence            467899999776 8999999999999999999999999999999999999999999987 77 66666654   344455


Q ss_pred             HhHCCCCccEEEeCCCchhHHHHHHhhccCCEEEEEecccccCCCCCCCccchHHHhhcceeEEEeeccccccchHHHHH
Q 028523           82 KRYFPEGINIYFENVGGKMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCLISKRIRMEGFLVPDYFHLYPKFLE  161 (208)
Q Consensus        82 ~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  161 (208)
                      ++.  +++|+++||+|+.....++++++++|+++.+|.....    ..........+.+++++.+....     ..+.++
T Consensus       221 ~~~--~~~d~~ld~~g~~~~~~~~~~l~~~G~~v~~g~~~~~----~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~  289 (334)
T PRK13771        221 KKI--GGADIVIETVGTPTLEESLRSLNMGGKIIQIGNVDPS----PTYSLRLGYIILKDIEIIGHISA-----TKRDVE  289 (334)
T ss_pred             Hhc--CCCcEEEEcCChHHHHHHHHHHhcCCEEEEEeccCCC----CCcccCHHHHHhcccEEEEecCC-----CHHHHH
Confidence            544  2699999999988889999999999999999975421    11012233345677787776422     256788


Q ss_pred             HHHHHHHCCCceeeeeeeecCCcHHHHHHHHhcCCccceEEEEe
Q 028523          162 MMIPRIKEGKIVYVEDKAEGLESAPAALVGLFSGRNVGKQVVEV  205 (208)
Q Consensus       162 ~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~  205 (208)
                      ++++++.++.+++.+.++++++++.+|++.+.++...+|+++.+
T Consensus       290 ~~~~~~~~~~l~~~~~~~~~~~~~~~a~~~~~~~~~~~kvv~~~  333 (334)
T PRK13771        290 EALKLVAEGKIKPVIGAEVSLSEIDKALEELKDKSRIGKILVKP  333 (334)
T ss_pred             HHHHHHHcCCCcceEeeeEcHHHHHHHHHHHHcCCCcceEEEec
Confidence            89999999999887788999999999999999988889999865

>cd08269 Zn_ADH9 Alcohol dehydrogenases of the MDR family

Probab=99.89  E-value=3.6e-21  Score=147.83  Aligned_cols=192  Identities=19%  Similarity=0.159  Sum_probs=154.6

Q ss_pred             chhhHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCE-EEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHH
Q 028523            2 PGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCY-VVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAA   80 (208)
Q Consensus         2 ~~~tA~~~l~~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g~~-v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~   80 (208)
                      +++|||+++. .+++++|++++|+| +|++|++++|+|+.+|++ |+++++++++.+.++ ++|++.++++++. ++...
T Consensus       114 ~~~~a~~~~~-~~~~~~~~~vlI~g-~g~vg~~~~~la~~~g~~~v~~~~~~~~~~~~~~-~~g~~~~~~~~~~-~~~~~  189 (312)
T cd08269         114 PLGCALNVFR-RGWIRAGKTVAVIG-AGFIGLLFLQLAAAAGARRVIAIDRRPARLALAR-ELGATEVVTDDSE-AIVER  189 (312)
T ss_pred             hHHHHHHHHH-hcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHH-HhCCceEecCCCc-CHHHH
Confidence            5678899885 78899999999997 699999999999999998 999998888888887 8999888887765 78888


Q ss_pred             HHhHCCC-CccEEEeCCCc-hhHHHHHHhhccCCEEEEEecccccCCCCCCCccchHHHhhcceeEEEeeccccccchHH
Q 028523           81 LKRYFPE-GINIYFENVGG-KMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCLISKRIRMEGFLVPDYFHLYPK  158 (208)
Q Consensus        81 ~~~~~~~-~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  158 (208)
                      +.+.+++ ++|+++||.|+ .....++++|+++|+++.+|....     .....+......+++.+.++.... +....+
T Consensus       190 l~~~~~~~~vd~vld~~g~~~~~~~~~~~l~~~g~~~~~g~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~  263 (312)
T cd08269         190 VRELTGGAGADVVIEAVGHQWPLDLAGELVAERGRLVIFGYHQD-----GPRPVPFQTWNWKGIDLINAVERD-PRIGLE  263 (312)
T ss_pred             HHHHcCCCCCCEEEECCCCHHHHHHHHHHhccCCEEEEEccCCC-----CCcccCHHHHhhcCCEEEEecccC-ccchhh
Confidence            8887776 89999999985 678899999999999999986531     112233345566777776654332 223356


Q ss_pred             HHHHHHHHHHCCCcee--eeeeeecCCcHHHHHHHHhcCCc-cceEEE
Q 028523          159 FLEMMIPRIKEGKIVY--VEDKAEGLESAPAALVGLFSGRN-VGKQVV  203 (208)
Q Consensus       159 ~~~~~~~~~~~g~~~~--~~~~~~~~~~~~~a~~~~~~~~~-~gk~vv  203 (208)
                      .++++++++.++.+.+  .+.++++++++.++++.+.+++. ..|+++
T Consensus       264 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~  311 (312)
T cd08269         264 GMREAVKLIADGRLDLGSLLTHEFPLEELGDAFEAARRRPDGFIKGVI  311 (312)
T ss_pred             HHHHHHHHHHcCCCCchhheeeeecHHHHHHHHHHHHhCCCCceEEEe
Confidence            7899999999999987  35678999999999999999864 578876

The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent i

>TIGR02824 quinone_pig3 putative NAD(P)H quinone oxidoreductase, PIG3 family

Probab=99.89  E-value=3.5e-21  Score=148.32  Aligned_cols=197  Identities=28%  Similarity=0.402  Sum_probs=162.0

Q ss_pred             chhhHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHHH
Q 028523            2 PGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAAL   81 (208)
Q Consensus         2 ~~~tA~~~l~~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~~   81 (208)
                      +++|||+++.+.+.+.++++++|+|+++++|++++++++..|++|+++++++++.+.++ ++|.+.+++.... ++...+
T Consensus       123 ~~~ta~~~~~~~~~~~~~~~vlv~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~g~~~~~~~~~~-~~~~~~  200 (325)
T TIGR02824       123 TFFTVWSNLFQRGGLKAGETVLIHGGASGIGTTAIQLAKAFGARVFTTAGSDEKCAACE-ALGADIAINYREE-DFVEVV  200 (325)
T ss_pred             HHHHHHHHHHHhcCCCCCCEEEEEcCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-HcCCcEEEecCch-hHHHHH
Confidence            46789999888899999999999999999999999999999999999999999888887 8998878777665 677777


Q ss_pred             HhHCCC-CccEEEeCCCchhHHHHHHhhccCCEEEEEecccccCCCCCCCccchHHHhhcceeEEEeecccc-----ccc
Q 028523           82 KRYFPE-GINIYFENVGGKMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCLISKRIRMEGFLVPDY-----FHL  155 (208)
Q Consensus        82 ~~~~~~-~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~  155 (208)
                      .+..++ ++|+++++.++..+..++++++++|+++.+|.....    .. ..+....+.+++++.+......     +..
T Consensus       201 ~~~~~~~~~d~~i~~~~~~~~~~~~~~l~~~g~~v~~g~~~~~----~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  275 (325)
T TIGR02824       201 KAETGGKGVDVILDIVGGSYLNRNIKALALDGRIVQIGFQGGR----KA-ELDLGPLLAKRLTITGSTLRARPVAEKAAI  275 (325)
T ss_pred             HHHcCCCCeEEEEECCchHHHHHHHHhhccCcEEEEEecCCCC----cC-CCChHHHHhcCCEEEEEehhhcchhhhHHH
Confidence            777665 899999999988888999999999999999875421    11 2334445588999998876542     222


Q ss_pred             hHHHHHHHHHHHHCCCceeeeeeeecCCcHHHHHHHHhcCCccceEEEEe
Q 028523          156 YPKFLEMMIPRIKEGKIVYVEDKAEGLESAPAALVGLFSGRNVGKQVVEV  205 (208)
Q Consensus       156 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~  205 (208)
                      ....+.++++++.++.+.+..+..++++++.++++.+.++...+|+++++
T Consensus       276 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~  325 (325)
T TIGR02824       276 AAELREHVWPLLASGRVRPVIDKVFPLEDAAQAHALMESGDHIGKIVLTV  325 (325)
T ss_pred             HHHHHHHHHHHHHCCcccCccccEEeHHHHHHHHHHHHhCCCcceEEEeC
Confidence            34556778899999998877778899999999999999888889999864

Members of this family are putative quinone oxidoreductases that belong to the broader superfamily (modeled by Pfam pfam00107) of zinc-dependent alcohol (of medium chain length) dehydrogenases and quinone oxiooreductases. The alignment shows no motif of conserved Cys residues as are found in zinc-binding members of the superfamily, and members are likely to be quinone oxidoreductases instead. A member of this family in Homo sapiens, PIG3, is induced by p53 but is otherwise uncharacterized.

>cd08286 FDH_like_ADH2 formaldehyde dehydrogenase (FDH)-like

Probab=99.89  E-value=4.4e-21  Score=149.46  Aligned_cols=189  Identities=19%  Similarity=0.151  Sum_probs=152.8

Q ss_pred             chhhHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcC-CEEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHH
Q 028523            2 PGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVG-CYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAA   80 (208)
Q Consensus         2 ~~~tA~~~l~~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g-~~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~   80 (208)
                      +++|||+++...+++.+|++++|.|+ |++|++++|+++.+| .+|+++++++++.+.++ ++|++.++++++. ++...
T Consensus       150 ~~~ta~~~~~~~~~~~~g~~vlI~g~-g~~g~~~~~~a~~~G~~~v~~~~~~~~~~~~~~-~~g~~~~v~~~~~-~~~~~  226 (345)
T cd08286         150 ILPTGYECGVLNGKVKPGDTVAIVGA-GPVGLAALLTAQLYSPSKIIMVDLDDNRLEVAK-KLGATHTVNSAKG-DAIEQ  226 (345)
T ss_pred             hhHHHHHHHHhhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHH-HhCCCceeccccc-cHHHH
Confidence            46889988777888999999999875 999999999999999 69999888888888888 8999999998876 77777


Q ss_pred             HHhHCCC-CccEEEeCCCc-hhHHHHHHhhccCCEEEEEecccccCCCCCCCccchHHHhhcceeEEEeeccccccchHH
Q 028523           81 LKRYFPE-GINIYFENVGG-KMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCLISKRIRMEGFLVPDYFHLYPK  158 (208)
Q Consensus        81 ~~~~~~~-~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  158 (208)
                      +.+.+++ ++|++||+++. +.+..+++.|+++|+++.+|....      ....+....+.+++++.+....      .+
T Consensus       227 i~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~g~~v~~g~~~~------~~~~~~~~~~~~~~~~~~~~~~------~~  294 (345)
T cd08286         227 VLELTDGRGVDVVIEAVGIPATFELCQELVAPGGHIANVGVHGK------PVDLHLEKLWIKNITITTGLVD------TN  294 (345)
T ss_pred             HHHHhCCCCCCEEEECCCCHHHHHHHHHhccCCcEEEEecccCC------CCCcCHHHHhhcCcEEEeecCc------hh
Confidence            7777665 89999999984 688899999999999999986431      1223455557788888764332      24


Q ss_pred             HHHHHHHHHHCCCceee--eeeeecCCcHHHHHHHHhcCC--ccceEEEEe
Q 028523          159 FLEMMIPRIKEGKIVYV--EDKAEGLESAPAALVGLFSGR--NVGKQVVEV  205 (208)
Q Consensus       159 ~~~~~~~~~~~g~~~~~--~~~~~~~~~~~~a~~~~~~~~--~~gk~vv~~  205 (208)
                      .++++.++++++.+.+.  +.++++++++.++++.+....  ...|++|++
T Consensus       295 ~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~~k~~~~~  345 (345)
T cd08286         295 TTPMLLKLVSSGKLDPSKLVTHRFKLSEIEKAYDTFSAAAKHKALKVIIDF  345 (345)
T ss_pred             hHHHHHHHHHcCCCChHHcEEeEeeHHHHHHHHHHHhccCCCCeeEEEEeC
Confidence            57888899999998753  568899999999999998764  345998864

This group is related to formaldehyde dehydrogenase (FDH), which is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. This family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Another member is identified as a dihydroxyacetone reductase. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (

>cd05276 p53_inducible_oxidoreductase PIG3 p53-inducible quinone oxidoreductase

Probab=99.89  E-value=3.9e-21  Score=147.83  Aligned_cols=195  Identities=30%  Similarity=0.443  Sum_probs=159.8

Q ss_pred             chhhHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHHH
Q 028523            2 PGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAAL   81 (208)
Q Consensus         2 ~~~tA~~~l~~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~~   81 (208)
                      ++.|+|+++.+.+.+.++++++|+|++|++|++++++++..|++++++++++++.+.++ ++|.+.++++... ++.+.+
T Consensus       123 ~~~~a~~~~~~~~~~~~~~~vlv~g~~~~ig~~~~~~~~~~g~~v~~~~~~~~~~~~~~-~~g~~~~~~~~~~-~~~~~~  200 (323)
T cd05276         123 VFFTAWQNLFQLGGLKAGETVLIHGGASGVGTAAIQLAKALGARVIATAGSEEKLEACR-ALGADVAINYRTE-DFAEEV  200 (323)
T ss_pred             HHHHHHHHHHHhcCCCCCCEEEEEcCcChHHHHHHHHHHHcCCEEEEEcCCHHHHHHHH-HcCCCEEEeCCch-hHHHHH
Confidence            46789999888888999999999999999999999999999999999999999999887 8998888887765 677777


Q ss_pred             HhHCCC-CccEEEeCCCchhHHHHHHhhccCCEEEEEecccccCCCCCCCccchHHHhhcceeEEEeecccc-----ccc
Q 028523           82 KRYFPE-GINIYFENVGGKMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCLISKRIRMEGFLVPDY-----FHL  155 (208)
Q Consensus        82 ~~~~~~-~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~  155 (208)
                      .+...+ ++|+++|+.|+......+++++++|+++.++......     ........+.+++++.++.....     +..
T Consensus       201 ~~~~~~~~~d~vi~~~g~~~~~~~~~~~~~~g~~i~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  275 (323)
T cd05276         201 KEATGGRGVDVILDMVGGDYLARNLRALAPDGRLVLIGLLGGAK-----AELDLAPLLRKRLTLTGSTLRSRSLEEKAAL  275 (323)
T ss_pred             HHHhCCCCeEEEEECCchHHHHHHHHhhccCCEEEEEecCCCCC-----CCCchHHHHHhCCeEEEeeccchhhhccHHH
Confidence            776655 8999999999888889999999999999998754211     12233445568888888775442     222


Q ss_pred             hHHHHHHHHHHHHCCCceeeeeeeecCCcHHHHHHHHhcCCccceEEE
Q 028523          156 YPKFLEMMIPRIKEGKIVYVEDKAEGLESAPAALVGLFSGRNVGKQVV  203 (208)
Q Consensus       156 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv  203 (208)
                      ....+.++++++.++.+.+..+..++++++.++++.+.++...+|+++
T Consensus       276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~kvv~  323 (323)
T cd05276         276 AAAFREHVWPLFASGRIRPVIDKVFPLEEAAEAHRRMESNEHIGKIVL  323 (323)
T ss_pred             HHHHHHHHHHHHHCCCccCCcceEEcHHHHHHHHHHHHhCCCcceEeC
Confidence            345677788999999998777788999999999999998888888874

PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding

>cd08236 sugar_DH NAD(P)-dependent sugar dehydrogenases

Probab=99.89  E-value=4.3e-21  Score=149.40  Aligned_cols=194  Identities=21%  Similarity=0.291  Sum_probs=155.2

Q ss_pred             chhhHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCE-EEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHH
Q 028523            2 PGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCY-VVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAA   80 (208)
Q Consensus         2 ~~~tA~~~l~~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g~~-v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~   80 (208)
                      +++|||+++. .+.++++++|+|+| +|.+|++++|+|+.+|++ |+++++++++.+.++ ++|++.++++++. . ..+
T Consensus       144 ~~~ta~~~l~-~~~~~~~~~vlI~g-~g~~g~~~~~lA~~~G~~~v~~~~~~~~~~~~l~-~~g~~~~~~~~~~-~-~~~  218 (343)
T cd08236         144 PAAVALHAVR-LAGITLGDTVVVIG-AGTIGLLAIQWLKILGAKRVIAVDIDDEKLAVAR-ELGADDTINPKEE-D-VEK  218 (343)
T ss_pred             hHHHHHHHHH-hcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHH-HcCCCEEecCccc-c-HHH
Confidence            4679999995 78899999999997 599999999999999996 999998999999887 8999889988876 5 667


Q ss_pred             HHhHCCC-CccEEEeCCCc-hhHHHHHHhhccCCEEEEEecccccCCCCCCCccchHHHhhcceeEEEeeccccccchHH
Q 028523           81 LKRYFPE-GINIYFENVGG-KMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCLISKRIRMEGFLVPDYFHLYPK  158 (208)
Q Consensus        81 ~~~~~~~-~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  158 (208)
                      +.+..++ ++|+++||.|+ ..+..++++|+++|+++.+|.....   ...........+.+++++.++..........+
T Consensus       219 ~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  295 (343)
T cd08236         219 VRELTEGRGADLVIEAAGSPATIEQALALARPGGKVVLVGIPYGD---VTLSEEAFEKILRKELTIQGSWNSYSAPFPGD  295 (343)
T ss_pred             HHHHhCCCCCCEEEECCCCHHHHHHHHHHhhcCCEEEEEcccCCC---cccccCCHHHHHhcCcEEEEEeeccccccchh
Confidence            7777666 79999999984 6889999999999999999865421   01112233455678888888776443223456


Q ss_pred             HHHHHHHHHHCCCce--eeeeeeecCCcHHHHHHHHhc-CCccceEEE
Q 028523          159 FLEMMIPRIKEGKIV--YVEDKAEGLESAPAALVGLFS-GRNVGKQVV  203 (208)
Q Consensus       159 ~~~~~~~~~~~g~~~--~~~~~~~~~~~~~~a~~~~~~-~~~~gk~vv  203 (208)
                      .+.++++++.++.+.  +.+..+++++++.++++.+.+ +...+|+|+
T Consensus       296 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~v~  343 (343)
T cd08236         296 EWRTALDLLASGKIKVEPLITHRLPLEDGPAAFERLADREEFSGKVLL  343 (343)
T ss_pred             hHHHHHHHHHcCCCChHHheeeeecHHHHHHHHHHHHcCCCCeeEEeC
Confidence            788899999999886  445678999999999999998 567788874

This group contains proteins identified as sorbitol dehydrogenases and other sugar dehydrogenases of the medium-chain dehydrogenase/reductase family (MDR), which includes zinc-dependent alcohol dehydrogenase and related proteins. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Related proteins include threonine dehydrogenase, formaldehyde dehydrogenase, and butanediol dehydrogenase. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast

>cd05285 sorbitol_DH Sorbitol dehydrogenase

Probab=99.89  E-value=3.7e-21  Score=149.79  Aligned_cols=186  Identities=21%  Similarity=0.283  Sum_probs=148.8

Q ss_pred             chhhHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCE-EEEEeCCHHHHHHHHHhcCCCeeEecCCCccH---
Q 028523            2 PGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCY-VVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDL---   77 (208)
Q Consensus         2 ~~~tA~~~l~~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g~~-v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~---   77 (208)
                      ++++||+++ ..+++++|++++|+| +|++|++++|+|+.+|++ |+++++++++.+.++ ++|++.++++++. ++   
T Consensus       147 ~~~~a~~~~-~~~~~~~g~~vlI~g-~g~vG~~a~~lak~~G~~~v~~~~~~~~~~~~~~-~~g~~~vi~~~~~-~~~~~  222 (343)
T cd05285         147 PLSVGVHAC-RRAGVRPGDTVLVFG-AGPIGLLTAAVAKAFGATKVVVTDIDPSRLEFAK-ELGATHTVNVRTE-DTPES  222 (343)
T ss_pred             HHHHHHHHH-HhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHH-HcCCcEEeccccc-cchhH
Confidence            467888887 778999999999987 589999999999999997 899988899999888 8999999988765 43   


Q ss_pred             HHHHHhHCCC-CccEEEeCCCch-hHHHHHHhhccCCEEEEEecccccCCCCCCCccchHHHhhcceeEEEeeccccccc
Q 028523           78 DAALKRYFPE-GINIYFENVGGK-MLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCLISKRIRMEGFLVPDYFHL  155 (208)
Q Consensus        78 ~~~~~~~~~~-~~d~v~d~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  155 (208)
                      .+.+.+.+++ ++|++|||.|+. .+..++++++++|+++.+|....     . ...+......+++.+.++...     
T Consensus       223 ~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-----~-~~~~~~~~~~~~~~~~~~~~~-----  291 (343)
T cd05285         223 AEKIAELLGGKGPDVVIECTGAESCIQTAIYATRPGGTVVLVGMGKP-----E-VTLPLSAASLREIDIRGVFRY-----  291 (343)
T ss_pred             HHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhhcCCEEEEEccCCC-----C-CccCHHHHhhCCcEEEEeccC-----
Confidence            6667777666 799999999974 88999999999999999986432     1 122333455566666655432     


Q ss_pred             hHHHHHHHHHHHHCCCce--eeeeeeecCCcHHHHHHHHhcCC-ccceEEE
Q 028523          156 YPKFLEMMIPRIKEGKIV--YVEDKAEGLESAPAALVGLFSGR-NVGKQVV  203 (208)
Q Consensus       156 ~~~~~~~~~~~~~~g~~~--~~~~~~~~~~~~~~a~~~~~~~~-~~gk~vv  203 (208)
                       .+.++++++++.++.+.  +.+.++++++++.++++.+.+++ ..+|++|
T Consensus       292 -~~~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~k~~~  341 (343)
T cd05285         292 -ANTYPTAIELLASGKVDVKPLITHRFPLEDAVEAFETAAKGKKGVIKVVI  341 (343)
T ss_pred             -hHHHHHHHHHHHcCCCCchHhEEEEEeHHHHHHHHHHHHcCCCCeeEEEE
Confidence             25678889999999875  34567899999999999999885 4589998

Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. Aldose reductase catalyzes the NADP(H)-dependent conversion of glucose to sorbital, and SDH uses NAD(H) in the conversion of sorbitol to fructose. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.

>PRK10083 putative oxidoreductase; Provisional

Probab=99.89  E-value=5.3e-21  Score=148.66  Aligned_cols=189  Identities=16%  Similarity=0.144  Sum_probs=146.7

Q ss_pred             chhhHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHH-cCCE-EEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHH
Q 028523            2 PGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKL-VGCY-VVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDA   79 (208)
Q Consensus         2 ~~~tA~~~l~~~~~~~~g~~vli~ga~g~vG~~a~qla~~-~g~~-v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~   79 (208)
                      ++.++|+++ ..+++++|++|+|+| +|++|++++|+++. +|++ ++++++++++.+.++ ++|++.++++++. ++.+
T Consensus       145 ~~~~a~~~~-~~~~~~~g~~vlI~g-~g~vG~~~~~~a~~~~G~~~v~~~~~~~~~~~~~~-~~Ga~~~i~~~~~-~~~~  220 (339)
T PRK10083        145 PFTIAANVT-GRTGPTEQDVALIYG-AGPVGLTIVQVLKGVYNVKAVIVADRIDERLALAK-ESGADWVINNAQE-PLGE  220 (339)
T ss_pred             hHHHHHHHH-HhcCCCCCCEEEEEC-CCHHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHH-HhCCcEEecCccc-cHHH
Confidence            456677544 668899999999999 69999999999997 5994 777888888888888 8999999988765 6666


Q ss_pred             HHHhHCCCCccEEEeCCC-chhHHHHHHhhccCCEEEEEecccccCCCCCCCccchHHHhhcceeEEEeeccccccchHH
Q 028523           80 ALKRYFPEGINIYFENVG-GKMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCLISKRIRMEGFLVPDYFHLYPK  158 (208)
Q Consensus        80 ~~~~~~~~~~d~v~d~~g-~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  158 (208)
                      .+... +.++|++||++| ...+..++++++++|+++.+|....      ....+......+++++.+...      ..+
T Consensus       221 ~~~~~-g~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~------~~~~~~~~~~~~~~~~~~~~~------~~~  287 (339)
T PRK10083        221 ALEEK-GIKPTLIIDAACHPSILEEAVTLASPAARIVLMGFSSE------PSEIVQQGITGKELSIFSSRL------NAN  287 (339)
T ss_pred             HHhcC-CCCCCEEEECCCCHHHHHHHHHHhhcCCEEEEEccCCC------CceecHHHHhhcceEEEEEec------Chh
Confidence            66431 115789999999 4689999999999999999987542      111233333456666665442      145


Q ss_pred             HHHHHHHHHHCCCceee--eeeeecCCcHHHHHHHHhcCC-ccceEEEEecC
Q 028523          159 FLEMMIPRIKEGKIVYV--EDKAEGLESAPAALVGLFSGR-NVGKQVVEVAT  207 (208)
Q Consensus       159 ~~~~~~~~~~~g~~~~~--~~~~~~~~~~~~a~~~~~~~~-~~gk~vv~~~~  207 (208)
                      .+.++++++.+|.+.+.  ++++|+++++.+|++.+.++. ..+|+++++++
T Consensus       288 ~~~~~~~~~~~g~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~kvvv~~~~  339 (339)
T PRK10083        288 KFPVVIDWLSKGLIDPEKLITHTFDFQHVADAIELFEKDQRHCCKVLLTFAE  339 (339)
T ss_pred             hHHHHHHHHHcCCCChHHheeeeecHHHHHHHHHHHhcCCCceEEEEEecCC
Confidence            68889999999999873  678899999999999998654 56899998865

>cd08265 Zn_ADH3 Alcohol dehydrogenases of the MDR family

Probab=99.89  E-value=4.2e-21  Score=151.53  Aligned_cols=189  Identities=23%  Similarity=0.260  Sum_probs=148.6

Q ss_pred             chhhHHHHHHHh-cCCCCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHhcCCCeeEecCCC--ccH
Q 028523            2 PGMTAYAGFFEV-CSPKQGEYVFVSAASGAVGQLVGQFAKLVGC-YVVGSAGSKDKVDLLKNKFGFDEAFNYKEE--PDL   77 (208)
Q Consensus         2 ~~~tA~~~l~~~-~~~~~g~~vli~ga~g~vG~~a~qla~~~g~-~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~--~~~   77 (208)
                      +++|||+++... +++++|++|+|+| .|++|++++|+|+..|+ +|+++++++++.+.++ ++|++.++++++.  +++
T Consensus       186 ~~~ta~~al~~~~~~~~~g~~VlV~g-~g~vG~~ai~lA~~~G~~~vi~~~~~~~~~~~~~-~~g~~~~v~~~~~~~~~~  263 (384)
T cd08265         186 PTSVAYNGLFIRGGGFRPGAYVVVYG-AGPIGLAAIALAKAAGASKVIAFEISEERRNLAK-EMGADYVFNPTKMRDCLS  263 (384)
T ss_pred             HHHHHHHHHHhhcCCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHH-HcCCCEEEcccccccccH
Confidence            467899998766 6899999999996 69999999999999999 7999998888888888 8999888887632  156


Q ss_pred             HHHHHhHCCC-CccEEEeCCCc--hhHHHHHHhhccCCEEEEEecccccCCCCCCCccchHHHhhcceeEEEeecccccc
Q 028523           78 DAALKRYFPE-GINIYFENVGG--KMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCLISKRIRMEGFLVPDYFH  154 (208)
Q Consensus        78 ~~~~~~~~~~-~~d~v~d~~g~--~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  154 (208)
                      ...+.+.+++ ++|+++|+.|+  ..+..++++|+++|+++.+|....      ...........+..++.+.....   
T Consensus       264 ~~~v~~~~~g~gvDvvld~~g~~~~~~~~~~~~l~~~G~~v~~g~~~~------~~~~~~~~~~~~~~~l~~~~~~~---  334 (384)
T cd08265         264 GEKVMEVTKGWGADIQVEAAGAPPATIPQMEKSIAINGKIVYIGRAAT------TVPLHLEVLQVRRAQIVGAQGHS---  334 (384)
T ss_pred             HHHHHHhcCCCCCCEEEECCCCcHHHHHHHHHHHHcCCEEEEECCCCC------CCcccHHHHhhCceEEEEeeccC---
Confidence            7778888776 89999999995  377899999999999999986432      11122344445566666654321   


Q ss_pred             chHHHHHHHHHHHHCCCceee--eeeeecCCcHHHHHHHHhcCCccceEEE
Q 028523          155 LYPKFLEMMIPRIKEGKIVYV--EDKAEGLESAPAALVGLFSGRNVGKQVV  203 (208)
Q Consensus       155 ~~~~~~~~~~~~~~~g~~~~~--~~~~~~~~~~~~a~~~~~~~~~~gk~vv  203 (208)
                       ....+.++++++.++.+.+.  +.++|+++++.+|++.+.++ ..+|+|+
T Consensus       335 -~~~~~~~~~~ll~~g~l~~~~~~~~~~~~~~~~~a~~~~~~~-~~~kvvv  383 (384)
T cd08265         335 -GHGIFPSVIKLMASGKIDMTKIITARFPLEGIMEAIKAASER-TDGKITI  383 (384)
T ss_pred             -CcchHHHHHHHHHcCCCChHHheEEEeeHHHHHHHHHHHhcC-CCceEEe
Confidence             13457889999999999864  56789999999999997665 5688886

This group resembles the zinc-dependent alcohol dehydrogenase and has the catalytic and structural zinc-binding sites characteristic of this group. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanedi

>cd08284 FDH_like_2 Glutathione-dependent formaldehyde dehydrogenase related proteins, child 2

Probab=99.89  E-value=4.7e-21  Score=149.22  Aligned_cols=187  Identities=20%  Similarity=0.225  Sum_probs=151.7

Q ss_pred             chhhHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHH
Q 028523            2 PGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGC-YVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAA   80 (208)
Q Consensus         2 ~~~tA~~~l~~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g~-~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~   80 (208)
                      +++|||+++.. +.+.+|++|+|+| +|++|++++|+++.+|+ +|+++++++++.+.++ ++|+. .+++++. ++...
T Consensus       152 ~~~ta~~~~~~-~~~~~~~~vlI~g-~g~vg~~~~~~a~~~g~~~v~~~~~~~~~~~~~~-~~g~~-~~~~~~~-~~~~~  226 (344)
T cd08284         152 ILPTGYFGAKR-AQVRPGDTVAVIG-CGPVGLCAVLSAQVLGAARVFAVDPVPERLERAA-ALGAE-PINFEDA-EPVER  226 (344)
T ss_pred             chHHHHhhhHh-cCCccCCEEEEEC-CcHHHHHHHHHHHHcCCceEEEEcCCHHHHHHHH-HhCCe-EEecCCc-CHHHH
Confidence            57899999955 7899999999997 69999999999999997 8999988888888888 89975 5666655 67777


Q ss_pred             HHhHCCC-CccEEEeCCCc-hhHHHHHHhhccCCEEEEEecccccCCCCCCCccchHHHhhcceeEEEeeccccccchHH
Q 028523           81 LKRYFPE-GINIYFENVGG-KMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCLISKRIRMEGFLVPDYFHLYPK  158 (208)
Q Consensus        81 ~~~~~~~-~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  158 (208)
                      +.+.+++ ++|++||++++ ..+..++++++++|+++.+|.....     .........+.+++++.+...     ...+
T Consensus       227 l~~~~~~~~~dvvid~~~~~~~~~~~~~~l~~~g~~v~~g~~~~~-----~~~~~~~~~~~~~~~~~~~~~-----~~~~  296 (344)
T cd08284         227 VREATEGRGADVVLEAVGGAAALDLAFDLVRPGGVISSVGVHTAE-----EFPFPGLDAYNKNLTLRFGRC-----PVRS  296 (344)
T ss_pred             HHHHhCCCCCCEEEECCCCHHHHHHHHHhcccCCEEEEECcCCCC-----CccccHHHHhhcCcEEEEecC-----Ccch
Confidence            8777765 89999999995 6889999999999999999976521     112334556777887764421     2356


Q ss_pred             HHHHHHHHHHCCCcee--eeeeeecCCcHHHHHHHHhcCCccceEEEE
Q 028523          159 FLEMMIPRIKEGKIVY--VEDKAEGLESAPAALVGLFSGRNVGKQVVE  204 (208)
Q Consensus       159 ~~~~~~~~~~~g~~~~--~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~  204 (208)
                      .++++++++.++.+.+  .+.++++++++.++++.+.+++. +|+|++
T Consensus       297 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~a~~~~~~~~~-~k~Vi~  343 (344)
T cd08284         297 LFPELLPLLESGRLDLEFLIDHRMPLEEAPEAYRLFDKRKV-LKVVLD  343 (344)
T ss_pred             hHHHHHHHHHcCCCChHHhEeeeecHHHHHHHHHHHhcCCc-eEEEec
Confidence            7889999999999876  35678999999999999998877 999985

Glutathione-dependent formaldehyde dehydrogenases (FDHs) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. These tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typical

>TIGR03366 HpnZ_proposed putative phosphonate catabolism associated alcohol dehydrogenase

Probab=99.89  E-value=1.2e-21  Score=148.32  Aligned_cols=169  Identities=18%  Similarity=0.228  Sum_probs=133.2

Q ss_pred             chhhHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCE-EEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHH
Q 028523            2 PGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCY-VVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAA   80 (208)
Q Consensus         2 ~~~tA~~~l~~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g~~-v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~   80 (208)
                      ++.|||+++.+ ....+|++|+|+|+ |++|++++|+|+.+|++ |+++++++++.+.++ ++|++.++++.+   ..+.
T Consensus       105 ~~~ta~~al~~-~~~~~g~~VlV~G~-G~vG~~~~~~ak~~G~~~Vi~~~~~~~r~~~a~-~~Ga~~~i~~~~---~~~~  178 (280)
T TIGR03366       105 ATATVMAALEA-AGDLKGRRVLVVGA-GMLGLTAAAAAAAAGAARVVAADPSPDRRELAL-SFGATALAEPEV---LAER  178 (280)
T ss_pred             HHHHHHHHHHh-ccCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHH-HcCCcEecCchh---hHHH
Confidence            45788999855 45669999999986 99999999999999995 888888999999998 999998887653   3445


Q ss_pred             HHhHCCC-CccEEEeCCCc-hhHHHHHHhhccCCEEEEEecccccCCCCCCCccchHHHhhcceeEEEeeccccccchHH
Q 028523           81 LKRYFPE-GINIYFENVGG-KMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCLISKRIRMEGFLVPDYFHLYPK  158 (208)
Q Consensus        81 ~~~~~~~-~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  158 (208)
                      +++.+.+ ++|++||++|. ..+..++++++++|+++.+|.....    .....+...++.+++++.|+....     .+
T Consensus       179 ~~~~~~~~g~d~vid~~G~~~~~~~~~~~l~~~G~iv~~G~~~~~----~~~~i~~~~~~~~~~~i~g~~~~~-----~~  249 (280)
T TIGR03366       179 QGGLQNGRGVDVALEFSGATAAVRACLESLDVGGTAVLAGSVFPG----GPVALDPEQVVRRWLTIRGVHNYE-----PR  249 (280)
T ss_pred             HHHHhCCCCCCEEEECCCChHHHHHHHHHhcCCCEEEEeccCCCC----CceeeCHHHHHhCCcEEEecCCCC-----HH
Confidence            5666655 89999999985 6789999999999999999975311    122345667788999999877543     45


Q ss_pred             HHHHHHHHHHCC--Cce--eeeeeeecCCcH
Q 028523          159 FLEMMIPRIKEG--KIV--YVEDKAEGLESA  185 (208)
Q Consensus       159 ~~~~~~~~~~~g--~~~--~~~~~~~~~~~~  185 (208)
                      .++++++++.++  .+.  +.++++|+++++
T Consensus       250 ~~~~~~~~l~~~~~~~~~~~~it~~~~l~~~  280 (280)
T TIGR03366       250 HLDQAVRFLAANGQRFPFEELVGKPFPLADV  280 (280)
T ss_pred             HHHHHHHHHHhhCCCCCHHHHhhcccccccC
Confidence            688899999874  333  457888998864

This clade of zinc-binding alcohol dehydrogenases (members of pfam00107) are repeatedly associated with genes proposed to be involved with the catabolism of phosphonate compounds.

>cd05283 CAD1 Cinnamyl alcohol dehydrogenases (CAD)

Probab=99.89  E-value=2.9e-21  Score=150.00  Aligned_cols=183  Identities=23%  Similarity=0.215  Sum_probs=149.9

Q ss_pred             chhhHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHHH
Q 028523            2 PGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAAL   81 (208)
Q Consensus         2 ~~~tA~~~l~~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~~   81 (208)
                      +++|||+++... .+.+|++++|.| .|++|++++|+++..|++++++++++++.+.++ ++|++.+++.++. +...  
T Consensus       154 ~~~ta~~~~~~~-~~~~g~~vlV~g-~g~vG~~~~~~a~~~G~~v~~~~~~~~~~~~~~-~~g~~~vi~~~~~-~~~~--  227 (337)
T cd05283         154 AGITVYSPLKRN-GVGPGKRVGVVG-IGGLGHLAVKFAKALGAEVTAFSRSPSKKEDAL-KLGADEFIATKDP-EAMK--  227 (337)
T ss_pred             HHHHHHHHHHhc-CCCCCCEEEEEC-CcHHHHHHHHHHHHcCCeEEEEcCCHHHHHHHH-HcCCcEEecCcch-hhhh--
Confidence            467899998664 589999999976 699999999999999999999999999999998 8999888877653 3221  


Q ss_pred             HhHCCCCccEEEeCCCch-hHHHHHHhhccCCEEEEEecccccCCCCCCCccchHHHhhcceeEEEeeccccccchHHHH
Q 028523           82 KRYFPEGINIYFENVGGK-MLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCLISKRIRMEGFLVPDYFHLYPKFL  160 (208)
Q Consensus        82 ~~~~~~~~d~v~d~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (208)
                       . .++++|++|||+++. ....++++++++|+++.+|.....      ...+...++.+++++.++....     .+.+
T Consensus       228 -~-~~~~~d~v~~~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~------~~~~~~~~~~~~~~i~~~~~~~-----~~~~  294 (337)
T cd05283         228 -K-AAGSLDLIIDTVSASHDLDPYLSLLKPGGTLVLVGAPEEP------LPVPPFPLIFGRKSVAGSLIGG-----RKET  294 (337)
T ss_pred             -h-ccCCceEEEECCCCcchHHHHHHHhcCCCEEEEEeccCCC------CccCHHHHhcCceEEEEecccC-----HHHH
Confidence             1 234799999999976 589999999999999999875421      1234455677899998877654     4668


Q ss_pred             HHHHHHHHCCCceeeeeeeecCCcHHHHHHHHhcCCccceEEEE
Q 028523          161 EMMIPRIKEGKIVYVEDKAEGLESAPAALVGLFSGRNVGKQVVE  204 (208)
Q Consensus       161 ~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~  204 (208)
                      +.+++++.++.+.+.+ +.++++++.+|++.+.+++..||+|++
T Consensus       295 ~~~~~~~~~~~l~~~~-~~~~~~~~~~a~~~~~~~~~~~k~v~~  337 (337)
T cd05283         295 QEMLDFAAEHGIKPWV-EVIPMDGINEALERLEKGDVRYRFVLD  337 (337)
T ss_pred             HHHHHHHHhCCCccce-EEEEHHHHHHHHHHHHcCCCcceEeeC
Confidence            8899999999998764 679999999999999999999999874

Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic

>cd08262 Zn_ADH8 Alcohol dehydrogenases of the MDR family

Probab=99.89  E-value=6.1e-21  Score=148.40  Aligned_cols=188  Identities=21%  Similarity=0.204  Sum_probs=144.9

Q ss_pred             chhhHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCE-EEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHH-
Q 028523            2 PGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCY-VVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDA-   79 (208)
Q Consensus         2 ~~~tA~~~l~~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g~~-v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~-   79 (208)
                      +++|||+++ ..+++++|++|+|+| +|++|.+++|+++.+|++ +++++.++++.+.++ ++|++.++++++. +..+ 
T Consensus       146 ~~~~a~~~~-~~~~~~~g~~VlI~g-~g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~-~~g~~~~i~~~~~-~~~~~  221 (341)
T cd08262         146 PLAVGLHAV-RRARLTPGEVALVIG-CGPIGLAVIAALKARGVGPIVASDFSPERRALAL-AMGADIVVDPAAD-SPFAA  221 (341)
T ss_pred             hHHHHHHHH-HhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHH-HcCCcEEEcCCCc-CHHHH
Confidence            467899986 778999999999997 599999999999999995 667777888888888 8999888887764 3222 


Q ss_pred             --HHHhHCCC-CccEEEeCCCc-hhHHHHHHhhccCCEEEEEecccccCCCCCCCccchHHHhhcceeEEEeeccccccc
Q 028523           80 --ALKRYFPE-GINIYFENVGG-KMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCLISKRIRMEGFLVPDYFHL  155 (208)
Q Consensus        80 --~~~~~~~~-~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  155 (208)
                        .+.....+ ++|+++|+.|+ ..+..++++++++|+++.+|.....    .  .......+.+++++.+.....    
T Consensus       222 ~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~g~~v~~g~~~~~----~--~~~~~~~~~~~~~~~~~~~~~----  291 (341)
T cd08262         222 WAAELARAGGPKPAVIFECVGAPGLIQQIIEGAPPGGRIVVVGVCMES----D--NIEPALAIRKELTLQFSLGYT----  291 (341)
T ss_pred             HHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhccCCEEEEECCCCCC----C--ccCHHHHhhcceEEEEEeccc----
Confidence              23334444 89999999997 5788999999999999999875321    1  111222244666665443322    


Q ss_pred             hHHHHHHHHHHHHCCCceee--eeeeecCCcHHHHHHHHhcCCccceEEEE
Q 028523          156 YPKFLEMMIPRIKEGKIVYV--EDKAEGLESAPAALVGLFSGRNVGKQVVE  204 (208)
Q Consensus       156 ~~~~~~~~~~~~~~g~~~~~--~~~~~~~~~~~~a~~~~~~~~~~gk~vv~  204 (208)
                       .+.+.++++++.+|.+.+.  +.+++++++++++++.+.+++..+|+|++
T Consensus       292 -~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~a~~~~~~~~~~~kvvv~  341 (341)
T cd08262         292 -PEEFADALDALAEGKVDVAPMVTGTVGLDGVPDAFEALRDPEHHCKILVD  341 (341)
T ss_pred             -HHHHHHHHHHHHcCCCChHHheEEEeeHHHHHHHHHHHhcCCCceEEEeC
Confidence             3467889999999999763  46789999999999999999988999974

The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent i

>cd05195 enoyl_red enoyl reductase of polyketide synthase

Probab=99.89  E-value=4.5e-21  Score=145.37  Aligned_cols=195  Identities=21%  Similarity=0.326  Sum_probs=157.0

Q ss_pred             chhhHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcC--CCeeEecCCCccHHH
Q 028523            2 PGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFG--FDEAFNYKEEPDLDA   79 (208)
Q Consensus         2 ~~~tA~~~l~~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g--~~~v~~~~~~~~~~~   79 (208)
                      ++.|||+++.+.+.+++|++++|+|++|++|++++|+++..|++++++++++++.+.++ .+|  ++.++++.+. ++.+
T Consensus        92 ~~~~a~~~~~~~~~~~~g~~vlv~g~~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~-~~~~  169 (293)
T cd05195          92 AYLTAYYALVDLARLQKGESVLIHAAAGGVGQAAIQLAQHLGAEVFATVGSEEKREFLR-ELGGPVDHIFSSRDL-SFAD  169 (293)
T ss_pred             HHHHHHHHHHHHhccCCCCEEEEecCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-HhCCCcceEeecCch-hHHH
Confidence            45788999888889999999999999999999999999999999999999989999888 777  6778887765 6777


Q ss_pred             HHHhHCCC-CccEEEeCCCchhHHHHHHhhccCCEEEEEecccccCCCCCCCccchHHHhhcceeEEEeecccc----cc
Q 028523           80 ALKRYFPE-GINIYFENVGGKMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCLISKRIRMEGFLVPDY----FH  154 (208)
Q Consensus        80 ~~~~~~~~-~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~  154 (208)
                      ++.+.+++ ++|.++|++++..+..++++++++|+++.+|.....+    .... ....+.+++.+....+...    +.
T Consensus       170 ~~~~~~~~~~~d~vi~~~~~~~~~~~~~~l~~~g~~v~~g~~~~~~----~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~  244 (293)
T cd05195         170 GILRATGGRGVDVVLNSLSGELLRASWRCLAPFGRFVEIGKRDILS----NSKL-GMRPFLRNVSFSSVDLDQLARERPE  244 (293)
T ss_pred             HHHHHhCCCCceEEEeCCCchHHHHHHHhcccCceEEEeecccccc----CCcc-chhhhccCCeEEEEeHHHHhhhChH
Confidence            88877766 8999999999889999999999999999998754311    0111 1233455666666554432    22


Q ss_pred             chHHHHHHHHHHHHCCCceeeeeeeecCCcHHHHHHHHhcCCccceEEE
Q 028523          155 LYPKFLEMMIPRIKEGKIVYVEDKAEGLESAPAALVGLFSGRNVGKQVV  203 (208)
Q Consensus       155 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv  203 (208)
                      ...+.+.++.+++.++.+.+..+..++++++.++++.+..+...+|+++
T Consensus       245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~ivv  293 (293)
T cd05195         245 LLRELLREVLELLEAGVLKPLPPTVVPSASEIDAFRLMQSGKHIGKVVL  293 (293)
T ss_pred             HHHHHHHHHHHHHHCCCcccCCCeeechhhHHHHHHHHhcCCCCceecC
Confidence            3345678899999999998888888999999999999998888788874

Putative enoyl reductase of polyketide synthase. Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase

>cd08252 AL_MDR Arginate lyase and other MDR family members

Probab=99.89  E-value=7e-21  Score=147.71  Aligned_cols=192  Identities=22%  Similarity=0.248  Sum_probs=153.3

Q ss_pred             chhhHHHHHHHhcCCCC-----CCEEEEecCCchHHHHHHHHHHHcC-CEEEEEeCCHHHHHHHHHhcCCCeeEecCCCc
Q 028523            2 PGMTAYAGFFEVCSPKQ-----GEYVFVSAASGAVGQLVGQFAKLVG-CYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEP   75 (208)
Q Consensus         2 ~~~tA~~~l~~~~~~~~-----g~~vli~ga~g~vG~~a~qla~~~g-~~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~   75 (208)
                      +++|||+++.+.+.+.+     |++|+|+|++|++|++++|+++.+| ++|+++++++++.+.++ ++|++.++++.+  
T Consensus       128 ~~~ta~~~l~~~~~~~~~~~~~g~~vlV~g~~g~vg~~~~~~a~~~G~~~v~~~~~~~~~~~~~~-~~g~~~~~~~~~--  204 (336)
T cd08252         128 TSLTAWEALFDRLGISEDAENEGKTLLIIGGAGGVGSIAIQLAKQLTGLTVIATASRPESIAWVK-ELGADHVINHHQ--  204 (336)
T ss_pred             HHHHHHHHHHHhcCCCCCcCCCCCEEEEEcCCchHHHHHHHHHHHcCCcEEEEEcCChhhHHHHH-hcCCcEEEeCCc--
Confidence            46789999888888887     9999999999999999999999999 89999999999999998 899988888764  


Q ss_pred             cHHHHHHhHCCCCccEEEeCCC-chhHHHHHHhhccCCEEEEEecccccCCCCCCCccchHHHhhcceeEEEeecccc--
Q 028523           76 DLDAALKRYFPEGINIYFENVG-GKMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCLISKRIRMEGFLVPDY--  152 (208)
Q Consensus        76 ~~~~~~~~~~~~~~d~v~d~~g-~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--  152 (208)
                      ++..++....++++|.++|+++ +..+..++++++++|+++.+|...        ...+...++.+++++.+..+...  
T Consensus       205 ~~~~~i~~~~~~~~d~vl~~~~~~~~~~~~~~~l~~~g~~v~~g~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~  276 (336)
T cd08252         205 DLAEQLEALGIEPVDYIFCLTDTDQHWDAMAELIAPQGHICLIVDPQ--------EPLDLGPLKSKSASFHWEFMFTRSM  276 (336)
T ss_pred             cHHHHHHhhCCCCCCEEEEccCcHHHHHHHHHHhcCCCEEEEecCCC--------CcccchhhhcccceEEEEEeecccc
Confidence            5666666544348999999999 478999999999999999998642        11223333467777777554321  


Q ss_pred             -----ccchHHHHHHHHHHHHCCCceeeee---eeecCCcHHHHHHHHhcCCccceEEEE
Q 028523          153 -----FHLYPKFLEMMIPRIKEGKIVYVED---KAEGLESAPAALVGLFSGRNVGKQVVE  204 (208)
Q Consensus       153 -----~~~~~~~~~~~~~~~~~g~~~~~~~---~~~~~~~~~~a~~~~~~~~~~gk~vv~  204 (208)
                           +....+.+.++++++.+|.+.+.+.   ..++++++.++++.+.++...+|++++
T Consensus       277 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~vv~~  336 (336)
T cd08252         277 FQTPDMIEQHEILNEVADLLDAGKLKTTLTETLGPINAENLREAHALLESGKTIGKIVLE  336 (336)
T ss_pred             ccccchhhHHHHHHHHHHHHHCCCEecceeeeecCCCHHHHHHHHHHHHcCCccceEEeC
Confidence                 1133467888999999999987643   247999999999999999988999874

This group contains a structure identified as an arginate lyase. Other members are identified quinone reductases, alginate lyases, and other proteins related to the zinc-dependent dehydrogenases/reductases. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, whil

>cd08279 Zn_ADH_class_III Class III alcohol dehydrogenase

Probab=99.89  E-value=7.5e-21  Score=149.11  Aligned_cols=192  Identities=19%  Similarity=0.263  Sum_probs=154.5

Q ss_pred             chhhHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCE-EEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHH
Q 028523            2 PGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCY-VVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAA   80 (208)
Q Consensus         2 ~~~tA~~~l~~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g~~-v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~   80 (208)
                      +++|||+++...+++.+|++|+|+| .|++|++++|+|+..|++ |+++++++++.+.++ ++|+++++++++. ++..+
T Consensus       166 ~~~ta~~~~~~~~~~~~g~~vLI~g-~g~vG~a~i~lak~~G~~~Vi~~~~~~~~~~~~~-~~g~~~vv~~~~~-~~~~~  242 (363)
T cd08279         166 GVTTGVGAVVNTARVRPGDTVAVIG-CGGVGLNAIQGARIAGASRIIAVDPVPEKLELAR-RFGATHTVNASED-DAVEA  242 (363)
T ss_pred             hhHHHHHHHHhccCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCcEEEEcCCHHHHHHHH-HhCCeEEeCCCCc-cHHHH
Confidence            4688999988889999999999996 599999999999999995 999998999999887 8999889988876 77778


Q ss_pred             HHhHCCC-CccEEEeCCC-chhHHHHHHhhccCCEEEEEecccccCCCCCCCccchHHHhhcceeEEEeeccccccchHH
Q 028523           81 LKRYFPE-GINIYFENVG-GKMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCLISKRIRMEGFLVPDYFHLYPK  158 (208)
Q Consensus        81 ~~~~~~~-~~d~v~d~~g-~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  158 (208)
                      +.+...+ ++|+++|+++ +..+..++++++++|+++.+|....    ......+...+..++..+.+.....  ....+
T Consensus       243 l~~~~~~~~vd~vld~~~~~~~~~~~~~~l~~~G~~v~~g~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~  316 (363)
T cd08279         243 VRDLTDGRGADYAFEAVGRAATIRQALAMTRKGGTAVVVGMGPP----GETVSLPALELFLSEKRLQGSLYGS--ANPRR  316 (363)
T ss_pred             HHHHcCCCCCCEEEEcCCChHHHHHHHHHhhcCCeEEEEecCCC----CcccccCHHHHhhcCcEEEEEEecC--cCcHH
Confidence            8877755 8999999999 5788999999999999999986541    1122334445555666666654432  12356


Q ss_pred             HHHHHHHHHHCCCcee--eeeeeecCCcHHHHHHHHhcCCccceEE
Q 028523          159 FLEMMIPRIKEGKIVY--VEDKAEGLESAPAALVGLFSGRNVGKQV  202 (208)
Q Consensus       159 ~~~~~~~~~~~g~~~~--~~~~~~~~~~~~~a~~~~~~~~~~gk~v  202 (208)
                      .++++++++.++.+.+  .+.++++++++.+|++.+.+++..+.++
T Consensus       317 ~~~~~~~l~~~g~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~  362 (363)
T cd08279         317 DIPRLLDLYRAGRLKLDELVTRRYSLDEINEAFADMLAGENARGVI  362 (363)
T ss_pred             HHHHHHHHHHcCCCCcceeEEEEEcHHHHHHHHHHHhcCCceeEEe
Confidence            7889999999999876  3667899999999999999888765554

Glutathione-dependent formaldehyde dehydrogenases (FDHs, Class III ADH) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also known as glutathione-dependent formaldehyde dehydrogenase (FDH), which convert aldehydes to corresponding carboxylic acid and alcohol. ADH is a me

>cd08241 QOR1 Quinone oxidoreductase (QOR)

Probab=99.89  E-value=8.2e-21  Score=146.10  Aligned_cols=196  Identities=29%  Similarity=0.392  Sum_probs=161.0

Q ss_pred             chhhHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHHH
Q 028523            2 PGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAAL   81 (208)
Q Consensus         2 ~~~tA~~~l~~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~~   81 (208)
                      ++.+||+++.+.+.+.++++++|+|++|++|++++++++..|++|+++++++++.+.++ ++|.+.+++..+. ++.+.+
T Consensus       123 ~~~~a~~~~~~~~~~~~~~~vli~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~g~~~~~~~~~~-~~~~~i  200 (323)
T cd08241         123 TYGTAYHALVRRARLQPGETVLVLGAAGGVGLAAVQLAKALGARVIAAASSEEKLALAR-ALGADHVIDYRDP-DLRERV  200 (323)
T ss_pred             HHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHhCCEEEEEeCCHHHHHHHH-HcCCceeeecCCc-cHHHHH
Confidence            46788999877889999999999999999999999999999999999999999999998 8998888887765 777788


Q ss_pred             HhHCCC-CccEEEeCCCchhHHHHHHhhccCCEEEEEecccccCCCCCCCccchHHHhhcceeEEEeecccc----ccch
Q 028523           82 KRYFPE-GINIYFENVGGKMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCLISKRIRMEGFLVPDY----FHLY  156 (208)
Q Consensus        82 ~~~~~~-~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~  156 (208)
                      .+.+++ ++|.++++.|+.....++++++++|+++.+|....     ..........+.+++++.+.....+    +...
T Consensus       201 ~~~~~~~~~d~v~~~~g~~~~~~~~~~~~~~g~~v~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  275 (323)
T cd08241         201 KALTGGRGVDVVYDPVGGDVFEASLRSLAWGGRLLVIGFASG-----EIPQIPANLLLLKNISVVGVYWGAYARREPELL  275 (323)
T ss_pred             HHHcCCCCcEEEEECccHHHHHHHHHhhccCCEEEEEccCCC-----CcCcCCHHHHhhcCcEEEEEecccccchhHHHH
Confidence            887776 89999999998888899999999999999986432     1111223345667888888776543    2223


Q ss_pred             HHHHHHHHHHHHCCCceeeeeeeecCCcHHHHHHHHhcCCccceEEEE
Q 028523          157 PKFLEMMIPRIKEGKIVYVEDKAEGLESAPAALVGLFSGRNVGKQVVE  204 (208)
Q Consensus       157 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~  204 (208)
                      .+.+.++++++.++.+.+..+..++++++.++++.+.++...+|++++
T Consensus       276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vvv~  323 (323)
T cd08241         276 RANLAELFDLLAEGKIRPHVSAVFPLEQAAEALRALADRKATGKVVLT  323 (323)
T ss_pred             HHHHHHHHHHHHCCCcccccceEEcHHHHHHHHHHHHhCCCCCcEEeC
Confidence            467788999999999887777889999999999999988888898864

QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic

>cd08287 FDH_like_ADH3 formaldehyde dehydrogenase (FDH)-like

Probab=99.89  E-value=7.5e-21  Score=148.12  Aligned_cols=187  Identities=19%  Similarity=0.252  Sum_probs=152.0

Q ss_pred             chhhHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCE-EEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHH
Q 028523            2 PGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCY-VVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAA   80 (208)
Q Consensus         2 ~~~tA~~~l~~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g~~-v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~   80 (208)
                      +++|||+++ ..+.+++|++++|.| +|++|++++|+|+..|++ ++++++++++.+.++ ++|++.++++++. ++.+.
T Consensus       153 ~~~~a~~~~-~~~~~~~g~~vlI~g-~g~vg~~~~~lak~~G~~~v~~~~~~~~~~~~~~-~~ga~~v~~~~~~-~~~~~  228 (345)
T cd08287         153 VMGTGHHAA-VSAGVRPGSTVVVVG-DGAVGLCAVLAAKRLGAERIIAMSRHEDRQALAR-EFGATDIVAERGE-EAVAR  228 (345)
T ss_pred             HHHHHHHHH-HhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHH-HcCCceEecCCcc-cHHHH
Confidence            367889988 468899999999976 699999999999999995 788887777888888 8999999999876 77788


Q ss_pred             HHhHCCC-CccEEEeCCCc-hhHHHHHHhhccCCEEEEEecccccCCCCCCCccchHHHhhcceeEEEeeccccccchHH
Q 028523           81 LKRYFPE-GINIYFENVGG-KMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCLISKRIRMEGFLVPDYFHLYPK  158 (208)
Q Consensus        81 ~~~~~~~-~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  158 (208)
                      +.+.+++ ++|.++|++|+ ..+..++++++++|+++.+|....      ....+....+.+++++.+....     ..+
T Consensus       229 i~~~~~~~~~d~il~~~g~~~~~~~~~~~l~~~g~~v~~g~~~~------~~~~~~~~~~~~~~~~~~~~~~-----~~~  297 (345)
T cd08287         229 VRELTGGVGADAVLECVGTQESMEQAIAIARPGGRVGYVGVPHG------GVELDVRELFFRNVGLAGGPAP-----VRR  297 (345)
T ss_pred             HHHhcCCCCCCEEEECCCCHHHHHHHHHhhccCCEEEEecccCC------CCccCHHHHHhcceEEEEecCC-----cHH
Confidence            8887766 89999999984 688999999999999999886541      1223344567888888764322     256


Q ss_pred             HHHHHHHHHHCCCcee--eeeeeecCCcHHHHHHHHhcCCccceEEEE
Q 028523          159 FLEMMIPRIKEGKIVY--VEDKAEGLESAPAALVGLFSGRNVGKQVVE  204 (208)
Q Consensus       159 ~~~~~~~~~~~g~~~~--~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~  204 (208)
                      .++++++++.+|.+++  .+.++++++++.++++.+.++... |++|+
T Consensus       298 ~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~-k~~~~  344 (345)
T cd08287         298 YLPELLDDVLAGRINPGRVFDLTLPLDEVAEGYRAMDERRAI-KVLLR  344 (345)
T ss_pred             HHHHHHHHHHcCCCCHHHhEEeeecHHHHHHHHHHHhCCCce-EEEeC
Confidence            7888999999999886  356789999999999998877654 99885

This group contains proteins identified as alcohol dehydrogenases and glutathione-dependant formaldehyde dehydrogenases (FDH) of the zinc-dependent/medium chain alcohol dehydrogenase family. The MDR family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.

>cd08268 MDR2 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=99.89  E-value=1.2e-20  Score=145.60  Aligned_cols=197  Identities=24%  Similarity=0.355  Sum_probs=161.9

Q ss_pred             chhhHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHHH
Q 028523            2 PGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAAL   81 (208)
Q Consensus         2 ~~~tA~~~l~~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~~   81 (208)
                      ++.|||+++...+.+.++++++|+|+++++|++++++++..|++++++++++++.+.++ ++|.+.++++... .....+
T Consensus       128 ~~~~a~~~~~~~~~~~~~~~vli~g~~~~~g~~~~~~~~~~g~~v~~~~~~~~~~~~~~-~~g~~~~~~~~~~-~~~~~~  205 (328)
T cd08268         128 QYLTAYGALVELAGLRPGDSVLITAASSSVGLAAIQIANAAGATVIATTRTSEKRDALL-ALGAAHVIVTDEE-DLVAEV  205 (328)
T ss_pred             HHHHHHHHHHHhcCCCCCCEEEEecCccHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHH-HcCCCEEEecCCc-cHHHHH
Confidence            46789999988889999999999999999999999999999999999999999999997 8998888887765 677777


Q ss_pred             HhHCCC-CccEEEeCCCchhHHHHHHhhccCCEEEEEecccccCCCCCCCccchHHHhhcceeEEEeecccc---ccchH
Q 028523           82 KRYFPE-GINIYFENVGGKMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCLISKRIRMEGFLVPDY---FHLYP  157 (208)
Q Consensus        82 ~~~~~~-~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~  157 (208)
                      .+...+ ++|+++++.++.....++++++++|+++.+|....     .....+....+.+++++.+......   +....
T Consensus       206 ~~~~~~~~~d~vi~~~~~~~~~~~~~~l~~~g~~v~~g~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  280 (328)
T cd08268         206 LRITGGKGVDVVFDPVGGPQFAKLADALAPGGTLVVYGALSG-----EPTPFPLKAALKKSLTFRGYSLDEITLDPEARR  280 (328)
T ss_pred             HHHhCCCCceEEEECCchHhHHHHHHhhccCCEEEEEEeCCC-----CCCCCchHHHhhcCCEEEEEecccccCCHHHHH
Confidence            776665 89999999998888999999999999999987542     1112333445788888887765432   33445


Q ss_pred             HHHHHHHHHHHCCCceeeeeeeecCCcHHHHHHHHhcCCccceEEEEe
Q 028523          158 KFLEMMIPRIKEGKIVYVEDKAEGLESAPAALVGLFSGRNVGKQVVEV  205 (208)
Q Consensus       158 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~  205 (208)
                      ..+..+.+++.++.+.+.....++++++.++++.+..+...+|+++++
T Consensus       281 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~~~  328 (328)
T cd08268         281 RAIAFILDGLASGALKPVVDRVFPFDDIVEAHRYLESGQQIGKIVVTP  328 (328)
T ss_pred             HHHHHHHHHHHCCCCcCCcccEEcHHHHHHHHHHHHcCCCCceEEEeC
Confidence            567777788888988877778899999999999999888888999863

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>smart00829 PKS_ER Enoylreductase

Probab=99.88  E-value=6.2e-21  Score=144.44  Aligned_cols=195  Identities=22%  Similarity=0.341  Sum_probs=155.1

Q ss_pred             chhhHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCC--CeeEecCCCccHHH
Q 028523            2 PGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGF--DEAFNYKEEPDLDA   79 (208)
Q Consensus         2 ~~~tA~~~l~~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~--~~v~~~~~~~~~~~   79 (208)
                      ++.|||+++...+.+.+|++|+|+|++|++|++++|+++..|++|+++++++++.+.++ ++|+  +.++++.+. ++.+
T Consensus        88 ~~~~a~~~~~~~~~~~~g~~vlv~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~-~~~~  165 (288)
T smart00829       88 VFLTAYYALVDLARLRPGESVLIHAAAGGVGQAAIQLAQHLGAEVFATAGSPEKRDFLR-ELGIPDDHIFSSRDL-SFAD  165 (288)
T ss_pred             HHHHHHHHHHHHhCCCCCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-HcCCChhheeeCCCc-cHHH
Confidence            45688999878889999999999999999999999999999999999999999999998 8998  678888776 7777


Q ss_pred             HHHhHCCC-CccEEEeCCCchhHHHHHHhhccCCEEEEEecccccCCCCCCCccchHHHhhcceeEEEeecccc---ccc
Q 028523           80 ALKRYFPE-GINIYFENVGGKMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCLISKRIRMEGFLVPDY---FHL  155 (208)
Q Consensus        80 ~~~~~~~~-~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~  155 (208)
                      .+.+..++ ++|.++|++++.....++++++++|+++.+|.....    ........ .+.+++++.+..+...   +..
T Consensus       166 ~~~~~~~~~~~d~vi~~~~~~~~~~~~~~l~~~g~~v~~g~~~~~----~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~  240 (288)
T smart00829      166 EILRATGGRGVDVVLNSLAGEFLDASLRCLAPGGRFVEIGKRDIR----DNSQLGMA-PFRRNVSYHAVDLDALEEGPDR  240 (288)
T ss_pred             HHHHHhCCCCcEEEEeCCCHHHHHHHHHhccCCcEEEEEcCcCCc----cccccchh-hhcCCceEEEEEHHHhhcChHH
Confidence            77777665 899999999988888999999999999999875321    01112222 2456667666554321   122


Q ss_pred             hHHHHHHHHHHHHCCCceeeeeeeecCCcHHHHHHHHhcCCccceEEE
Q 028523          156 YPKFLEMMIPRIKEGKIVYVEDKAEGLESAPAALVGLFSGRNVGKQVV  203 (208)
Q Consensus       156 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv  203 (208)
                      ..+.+..+.+++.++.+.+...+.++++++.++++.+..+...+|+++
T Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ivv  288 (288)
T smart00829      241 IRELLAEVLELFAEGVLRPLPVTVFPISDVEDAFRYMQQGKHIGKVVL  288 (288)
T ss_pred             HHHHHHHHHHHHHCCCccCcCceEEcHHHHHHHHHHHhcCCCcceEeC
Confidence            344577788999999888766678999999999999998887788764

Enoylreductase in Polyketide synthases.

>cd08288 MDR_yhdh Yhdh putative quinone oxidoreductases

Probab=99.88  E-value=1.2e-20  Score=145.79  Aligned_cols=194  Identities=21%  Similarity=0.272  Sum_probs=149.9

Q ss_pred             chhhHHHHHH--HhcCCC-CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHH
Q 028523            2 PGMTAYAGFF--EVCSPK-QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLD   78 (208)
Q Consensus         2 ~~~tA~~~l~--~~~~~~-~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~   78 (208)
                      +++||+.++.  +..... +|++++|+|++|++|++++|+|+.+|++|++++.++++.+.++ ++|++.++++++.   .
T Consensus       127 ~~~ta~~~~~~~~~~~~~~~~~~vlI~ga~g~vg~~~~~~A~~~G~~vi~~~~~~~~~~~~~-~~g~~~~~~~~~~---~  202 (324)
T cd08288         127 AGFTAMLCVMALEDHGVTPGDGPVLVTGAAGGVGSVAVALLARLGYEVVASTGRPEEADYLR-SLGASEIIDRAEL---S  202 (324)
T ss_pred             HHHHHHHHHHHHhhcCcCCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHH-hcCCCEEEEcchh---h
Confidence            3566776654  113444 6789999999999999999999999999999999999999997 8999999988643   2


Q ss_pred             HHHHhHCCCCccEEEeCCCchhHHHHHHhhccCCEEEEEecccccCCCCCCCccchHHHhhcceeEEEeecccc-ccchH
Q 028523           79 AALKRYFPEGINIYFENVGGKMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCLISKRIRMEGFLVPDY-FHLYP  157 (208)
Q Consensus        79 ~~~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~  157 (208)
                      ..+.....+++|.++|+++++.+...+..++.+|+++.+|.....     ........++.+++++.+.+.... .....
T Consensus       203 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~g~~~~~G~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  277 (324)
T cd08288         203 EPGRPLQKERWAGAVDTVGGHTLANVLAQTRYGGAVAACGLAGGA-----DLPTTVMPFILRGVTLLGIDSVMAPIERRR  277 (324)
T ss_pred             HhhhhhccCcccEEEECCcHHHHHHHHHHhcCCCEEEEEEecCCC-----CCCcchhhhhccccEEEEEEeecccchhhH
Confidence            245555555789999999987788888999999999999875321     111223344478888888764333 22345


Q ss_pred             HHHHHHHHHHHCCCceeeeeeeecCCcHHHHHHHHhcCCccceEEEEe
Q 028523          158 KFLEMMIPRIKEGKIVYVEDKAEGLESAPAALVGLFSGRNVGKQVVEV  205 (208)
Q Consensus       158 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~  205 (208)
                      +.+..+.+++.++.+.+ +.+.++++++.++++.+.+++..+|+++++
T Consensus       278 ~~~~~~~~~~~~~~~~~-i~~~~~~~~~~~a~~~~~~~~~~~~vvv~~  324 (324)
T cd08288         278 AAWARLARDLDPALLEA-LTREIPLADVPDAAEAILAGQVRGRVVVDV  324 (324)
T ss_pred             HHHHHHHHHHhcCCccc-cceeecHHHHHHHHHHHhcCCccCeEEEeC
Confidence            67888888999998876 467899999999999999999999999864

Yhdh putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catal

>cd08282 PFDH_like Pseudomonas putida aldehyde-dismutating formaldehyde dehydrogenase (PFDH)

Probab=99.88  E-value=1.1e-20  Score=148.81  Aligned_cols=193  Identities=21%  Similarity=0.237  Sum_probs=150.5

Q ss_pred             chhhHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHH
Q 028523            2 PGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGC-YVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAA   80 (208)
Q Consensus         2 ~~~tA~~~l~~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g~-~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~   80 (208)
                      +++|||+++ ..+++.+|++|+|.| .|++|++++|+++..|+ +|+++++++++.+.++ ++|+ ..+++++. ++.+.
T Consensus       161 ~~~ta~~a~-~~~~~~~g~~vlI~g-~g~vg~~~~~~a~~~G~~~vi~~~~~~~~~~~~~-~~g~-~~v~~~~~-~~~~~  235 (375)
T cd08282         161 IFPTGWHGL-ELAGVQPGDTVAVFG-AGPVGLMAAYSAILRGASRVYVVDHVPERLDLAE-SIGA-IPIDFSDG-DPVEQ  235 (375)
T ss_pred             hHHHHHHHH-HhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHH-HcCC-eEeccCcc-cHHHH
Confidence            468999999 778999999999976 59999999999999998 8999988888998888 8998 45677665 77777


Q ss_pred             HHhHCCCCccEEEeCCCch------------hHHHHHHhhccCCEEEEEecccccCCCC-------CCCccchHHHhhcc
Q 028523           81 LKRYFPEGINIYFENVGGK------------MLDAVLLNMRIQGRITLCGMISQYNNDK-------PEGVHNLTCLISKR  141 (208)
Q Consensus        81 ~~~~~~~~~d~v~d~~g~~------------~~~~~~~~l~~~G~~v~~g~~~~~~~~~-------~~~~~~~~~~~~~~  141 (208)
                      +.+.+++++|+++||+|++            .+..++++++++|+++.+|.....+...       .....+...++.++
T Consensus       236 i~~~~~~~~d~v~d~~g~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  315 (375)
T cd08282         236 ILGLEPGGVDRAVDCVGYEARDRGGEAQPNLVLNQLIRVTRPGGGIGIVGVYVAEDPGAGDAAAKQGELSFDFGLLWAKG  315 (375)
T ss_pred             HHHhhCCCCCEEEECCCCcccccccccchHHHHHHHHHHhhcCcEEEEEeccCCcccccccccccCccccccHHHHHhcC
Confidence            7777666799999999975            3889999999999998887643211000       01223344455556


Q ss_pred             eeEEEeeccccccchHHHHHHHHHHHHCCCceee--eeeeecCCcHHHHHHHHhcCCccceEEEEe
Q 028523          142 IRMEGFLVPDYFHLYPKFLEMMIPRIKEGKIVYV--EDKAEGLESAPAALVGLFSGRNVGKQVVEV  205 (208)
Q Consensus       142 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~--~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~  205 (208)
                      ..+.+....     ..+.+.++++++.++.+++.  +.+++++++++++++.+.++. .+|+|+++
T Consensus       316 ~~~~~~~~~-----~~~~~~~~~~l~~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~-~~kvvv~~  375 (375)
T cd08282         316 LSFGTGQAP-----VKKYNRQLRDLILAGRAKPSFVVSHVISLEDAPEAYARFDKRL-ETKVVIKP  375 (375)
T ss_pred             cEEEEecCC-----chhhHHHHHHHHHcCCCChHHcEEEEeeHHHHHHHHHHHhcCC-ceEEEeCC
Confidence            555543321     25568889999999999873  778999999999999999988 88999863

Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. PFDH converts 2 molecules of aldehydes to corresponding carboxylic acid and alcohol. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fo

>cd05279 Zn_ADH1 Liver alcohol dehydrogenase and related zinc-dependent alcohol dehydrogenases

Probab=99.88  E-value=1.6e-20  Score=147.29  Aligned_cols=192  Identities=18%  Similarity=0.210  Sum_probs=150.7

Q ss_pred             chhhHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCE-EEEEeCCHHHHHHHHHhcCCCeeEecCCCc-cHHH
Q 028523            2 PGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCY-VVGSAGSKDKVDLLKNKFGFDEAFNYKEEP-DLDA   79 (208)
Q Consensus         2 ~~~tA~~~l~~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g~~-v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~-~~~~   79 (208)
                      +++|||+++...+++++|++|||+| +|++|++++|+|+.+|++ ++++++++++.+.++ ++|+++++++++.+ ++.+
T Consensus       167 ~~~ta~~al~~~~~~~~g~~vlI~g-~g~vG~~a~~~a~~~G~~~v~~~~~~~~~~~~~~-~~g~~~~v~~~~~~~~~~~  244 (365)
T cd05279         167 GFSTGYGAAVNTAKVTPGSTCAVFG-LGGVGLSVIMGCKAAGASRIIAVDINKDKFEKAK-QLGATECINPRDQDKPIVE  244 (365)
T ss_pred             chhHHHHHHHhccCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHH-HhCCCeecccccccchHHH
Confidence            5789999988888999999999996 599999999999999995 777777999999997 89998888876531 4556


Q ss_pred             HHHhHCCCCccEEEeCCC-chhHHHHHHhhc-cCCEEEEEecccccCCCCCCCccchHHHhhcceeEEEeeccccccchH
Q 028523           80 ALKRYFPEGINIYFENVG-GKMLDAVLLNMR-IQGRITLCGMISQYNNDKPEGVHNLTCLISKRIRMEGFLVPDYFHLYP  157 (208)
Q Consensus        80 ~~~~~~~~~~d~v~d~~g-~~~~~~~~~~l~-~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  157 (208)
                      .+.+.+++++|+++|++| ...+..++++++ ++|+++.+|....    ......+...+ .++.++.|.....+.  ..
T Consensus       245 ~l~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~----~~~~~~~~~~~-~~~~~l~g~~~~~~~--~~  317 (365)
T cd05279         245 VLTEMTDGGVDYAFEVIGSADTLKQALDATRLGGGTSVVVGVPPS----GTEATLDPNDL-LTGRTIKGTVFGGWK--SK  317 (365)
T ss_pred             HHHHHhCCCCcEEEECCCCHHHHHHHHHHhccCCCEEEEEecCCC----CCceeeCHHHH-hcCCeEEEEeccCCc--hH
Confidence            677766568999999998 478899999999 9999999987531    11222333344 566777776554332  24


Q ss_pred             HHHHHHHHHHHCCCcee--eeeeeecCCcHHHHHHHHhcCCccceEEE
Q 028523          158 KFLEMMIPRIKEGKIVY--VEDKAEGLESAPAALVGLFSGRNVGKQVV  203 (208)
Q Consensus       158 ~~~~~~~~~~~~g~~~~--~~~~~~~~~~~~~a~~~~~~~~~~gk~vv  203 (208)
                      +.+.++++++.++.+.+  .+.++++++++.+|++.+.+++.. |+++
T Consensus       318 ~~~~~~~~l~~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~-~~~~  364 (365)
T cd05279         318 DSVPKLVALYRQKKFPLDELITHVLPFEEINDGFDLMRSGESI-RTIL  364 (365)
T ss_pred             hHHHHHHHHHHcCCcchhHheeeeecHHHHHHHHHHHhCCCce-eeee
Confidence            56888999999999875  367889999999999999877654 6655

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall

>cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family

Probab=99.88  E-value=1.9e-20  Score=144.97  Aligned_cols=186  Identities=30%  Similarity=0.390  Sum_probs=148.8

Q ss_pred             chhhHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHHH
Q 028523            2 PGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAAL   81 (208)
Q Consensus         2 ~~~tA~~~l~~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~~   81 (208)
                      ++.|||+++.. +.+.++++++|+|++|++|++++++++..|++|+++++++++.+.+. ++|.+.+++..   ++.+.+
T Consensus       147 ~~~ta~~~l~~-~~~~~~~~vlI~ga~g~vG~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~~~~~~~~~~---~~~~~~  221 (332)
T cd08259         147 VVGTAVHALKR-AGVKKGDTVLVTGAGGGVGIHAIQLAKALGARVIAVTRSPEKLKILK-ELGADYVIDGS---KFSEDV  221 (332)
T ss_pred             HHHHHHHHHHH-hCCCCCCEEEEECCCCHHHHHHHHHHHHcCCeEEEEeCCHHHHHHHH-HcCCcEEEecH---HHHHHH
Confidence            56789999977 88999999999999999999999999999999999998988888887 88887777543   244445


Q ss_pred             HhHCCCCccEEEeCCCchhHHHHHHhhccCCEEEEEecccccCCCCCCCccchHHHhhcceeEEEeeccccccchHHHHH
Q 028523           82 KRYFPEGINIYFENVGGKMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCLISKRIRMEGFLVPDYFHLYPKFLE  161 (208)
Q Consensus        82 ~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  161 (208)
                      .+..  ++|++++++|......++++++++|+++.++.....    . ..........++..+.+....     ..+.++
T Consensus       222 ~~~~--~~d~v~~~~g~~~~~~~~~~~~~~g~~v~~g~~~~~----~-~~~~~~~~~~~~~~~~~~~~~-----~~~~~~  289 (332)
T cd08259         222 KKLG--GADVVIELVGSPTIEESLRSLNKGGRLVLIGNVTPD----P-APLRPGLLILKEIRIIGSISA-----TKADVE  289 (332)
T ss_pred             Hhcc--CCCEEEECCChHHHHHHHHHhhcCCEEEEEcCCCCC----C-cCCCHHHHHhCCcEEEEecCC-----CHHHHH
Confidence            4433  699999999988889999999999999999875421    1 111222333466666655321     256788


Q ss_pred             HHHHHHHCCCceeeeeeeecCCcHHHHHHHHhcCCccceEEEE
Q 028523          162 MMIPRIKEGKIVYVEDKAEGLESAPAALVGLFSGRNVGKQVVE  204 (208)
Q Consensus       162 ~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~  204 (208)
                      ++.+++.+|.+++.+.++++++++.++++.+.++...+|+|++
T Consensus       290 ~~~~~~~~~~l~~~~~~~~~~~~~~~a~~~~~~~~~~~kvv~~  332 (332)
T cd08259         290 EALKLVKEGKIKPVIDRVVSLEDINEALEDLKSGKVVGRIVLK  332 (332)
T ss_pred             HHHHHHHcCCCccceeEEEcHHHHHHHHHHHHcCCcccEEEeC
Confidence            8999999999988888899999999999999999888999874

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES.

>PF00107 ADH_zinc_N: Zinc-binding dehydrogenase; InterPro: IPR013149 Alcohol dehydrogenase (1

Probab=99.88  E-value=4.6e-21  Score=129.03  Aligned_cols=127  Identities=25%  Similarity=0.438  Sum_probs=113.8

Q ss_pred             hHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHHHHhHCCC-CccEEEeCCC-chhHHHHHHh
Q 028523           30 AVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPE-GINIYFENVG-GKMLDAVLLN  107 (208)
Q Consensus        30 ~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~-~~d~v~d~~g-~~~~~~~~~~  107 (208)
                      ++|++++|+|++.|++|+++++++++.+.++ ++|++.++++++. ++.+++++.+++ ++|++|||+| .+.++.++++
T Consensus         1 ~vG~~a~q~ak~~G~~vi~~~~~~~k~~~~~-~~Ga~~~~~~~~~-~~~~~i~~~~~~~~~d~vid~~g~~~~~~~~~~~   78 (130)
T PF00107_consen    1 GVGLMAIQLAKAMGAKVIATDRSEEKLELAK-ELGADHVIDYSDD-DFVEQIRELTGGRGVDVVIDCVGSGDTLQEAIKL   78 (130)
T ss_dssp             HHHHHHHHHHHHTTSEEEEEESSHHHHHHHH-HTTESEEEETTTS-SHHHHHHHHTTTSSEEEEEESSSSHHHHHHHHHH
T ss_pred             ChHHHHHHHHHHcCCEEEEEECCHHHHHHHH-hhccccccccccc-ccccccccccccccceEEEEecCcHHHHHHHHHH
Confidence            6899999999999999999999999999999 9999999999988 899999999998 9999999999 7899999999


Q ss_pred             hccCCEEEEEecccccCCCCCCCccchHHHhhcceeEEEeeccccccchHHHHHHHHHHHH
Q 028523          108 MRIQGRITLCGMISQYNNDKPEGVHNLTCLISKRIRMEGFLVPDYFHLYPKFLEMMIPRIK  168 (208)
Q Consensus       108 l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  168 (208)
                      ++++|+++.+|...+     .....+...++.+++++.++...+     .+.+++++++++
T Consensus        79 l~~~G~~v~vg~~~~-----~~~~~~~~~~~~~~~~i~g~~~~~-----~~~~~~~~~~la  129 (130)
T PF00107_consen   79 LRPGGRIVVVGVYGG-----DPISFNLMNLMFKEITIRGSWGGS-----PEDFQEALQLLA  129 (130)
T ss_dssp             EEEEEEEEEESSTST-----SEEEEEHHHHHHTTEEEEEESSGG-----HHHHHHHHHHHH
T ss_pred             hccCCEEEEEEccCC-----CCCCCCHHHHHhCCcEEEEEccCC-----HHHHHHHHHHhc
Confidence            999999999999762     345577888999999999999876     566666666664

1.1.1 from EC) (ADH) catalyzes the reversible oxidation of alcohols to their corresponding acetaldehyde or ketone with the concomitant reduction of NAD: alcohol + NAD = aldehyde or ketone + NADH Currently three structurally and catalytically different types of alcohol dehydrogenases are known: Zinc-containing 'long-chain' alcohol dehydrogenases. Insect-type, or 'short-chain' alcohol dehydrogenases. Iron-containing alcohol dehydrogenases. Zinc-containing ADH's [, ] are dimeric or tetrameric enzymes that bind two atoms of zinc per subunit. One of the zinc atom is essential for catalytic activity while the other is not. Both zinc atoms are coordinated by either cysteine or histidine residues; the catalytic zinc is coordinated by two cysteines and one histidine. Zinc-containing ADH's are found in bacteria, mammals, plants, and in fungi. In many species there is more than one isozyme (for example, humans have at least six isozymes, yeast have three, etc.). A number of other zinc-dependent dehydrogenases are closely related to zinc ADH [] and are included in this family. Sorbitol dehydrogenase (1.1.1.14 from EC) L-threonine 3-dehydrogenase (1.1.1.103 from EC) Glutathione-dependent formaldehyde dehydrogenase (1.1.1.284 from EC) Mannitol dehydrogenase (1.1.1.255 from EC) In addition, this family includes NADP-dependent quinone oxidoreductase (1.6.5.5 from EC), an enzyme found in bacteria (gene qor), in yeast and in mammals where, in some species such as rodents, it has been recruited as an eye lens protein and is known as zeta-crystallin []. The sequence of quinone oxidoreductase is distantly related to that other zinc-containing alcohol dehydrogenases and it lacks the zinc-ligand residues. The torpedo fish and mammalian synaptic vesicle membrane protein vat-1 is related to qor. This entry represents the cofactor-binding domain of these enzymes, which is normally found towards the C terminus. Structural studies indicate that it forms a classical Rossman fold that reversibly binds NAD(H) [, , ].; GO: 0008270 zinc ion binding, 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 3PI7_A 3COS_D 1VJ1_A 2ZB3_A 1PIW_B 1Q1N_A 1PS0_A 2EER_B 3KRT_A 1ZSY_A ....

>cd08272 MDR6 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=99.88  E-value=2.8e-20  Score=143.47  Aligned_cols=191  Identities=26%  Similarity=0.375  Sum_probs=155.2

Q ss_pred             chhhHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHHH
Q 028523            2 PGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAAL   81 (208)
Q Consensus         2 ~~~tA~~~l~~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~~   81 (208)
                      ++.+||+++.+.+++++|++++|+|+++++|++++++++..|++|++++++ ++.+.++ ++|.+.+++...  .+...+
T Consensus       128 ~~~~a~~~l~~~~~~~~~~~vli~g~~~~~g~~~~~~a~~~g~~v~~~~~~-~~~~~~~-~~g~~~~~~~~~--~~~~~~  203 (326)
T cd08272         128 VGITAWEGLVDRAAVQAGQTVLIHGGAGGVGHVAVQLAKAAGARVYATASS-EKAAFAR-SLGADPIIYYRE--TVVEYV  203 (326)
T ss_pred             HHHHHHHHHHHhcCCCCCCEEEEEcCCCcHHHHHHHHHHHcCCEEEEEech-HHHHHHH-HcCCCEEEecch--hHHHHH
Confidence            467899998888999999999999999999999999999999999999987 8888887 899888887654  266677


Q ss_pred             HhHCCC-CccEEEeCCCchhHHHHHHhhccCCEEEEEecccccCCCCCCCccchHHHhhcceeEEEeeccc--c----cc
Q 028523           82 KRYFPE-GINIYFENVGGKMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCLISKRIRMEGFLVPD--Y----FH  154 (208)
Q Consensus        82 ~~~~~~-~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~----~~  154 (208)
                      ...+.+ ++|.++|+.++.....++++++++|+++.++....         ........+++++.+.....  .    +.
T Consensus       204 ~~~~~~~~~d~v~~~~~~~~~~~~~~~l~~~g~~v~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  274 (326)
T cd08272         204 AEHTGGRGFDVVFDTVGGETLDASFEAVALYGRVVSILGGAT---------HDLAPLSFRNATYSGVFTLLPLLTGEGRA  274 (326)
T ss_pred             HHhcCCCCCcEEEECCChHHHHHHHHHhccCCEEEEEecCCc---------cchhhHhhhcceEEEEEcccccccccchh
Confidence            777766 89999999998888889999999999999876420         11122235677777665432  1    33


Q ss_pred             chHHHHHHHHHHHHCCCceeeee-eeecCCcHHHHHHHHhcCCccceEEEEe
Q 028523          155 LYPKFLEMMIPRIKEGKIVYVED-KAEGLESAPAALVGLFSGRNVGKQVVEV  205 (208)
Q Consensus       155 ~~~~~~~~~~~~~~~g~~~~~~~-~~~~~~~~~~a~~~~~~~~~~gk~vv~~  205 (208)
                      ...+.+..+++++.++.+.+.++ +.++++++.++++.+.++...+|+++++
T Consensus       275 ~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~~~  326 (326)
T cd08272         275 HHGEILREAARLVERGQLRPLLDPRTFPLEEAAAAHARLESGSARGKIVIDV  326 (326)
T ss_pred             hHHHHHHHHHHHHHCCCcccccccceecHHHHHHHHHHHHcCCcccEEEEEC
Confidence            34567888999999999987755 8899999999999999888889999864

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>PRK05396 tdh L-threonine 3-dehydrogenase; Validated

Probab=99.87  E-value=4e-20  Score=143.88  Aligned_cols=188  Identities=21%  Similarity=0.267  Sum_probs=146.2

Q ss_pred             hhhHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHHH
Q 028523            3 GMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGC-YVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAAL   81 (208)
Q Consensus         3 ~~tA~~~l~~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g~-~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~~   81 (208)
                      +.++++++..  ...+|++|+|.| .|++|++++|+++.+|+ +|++++.++++.+.++ ++|++.++++++. ++.+.+
T Consensus       150 ~~~~~~~~~~--~~~~g~~vlV~~-~g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~-~lg~~~~~~~~~~-~~~~~~  224 (341)
T PRK05396        150 FGNAVHTALS--FDLVGEDVLITG-AGPIGIMAAAVAKHVGARHVVITDVNEYRLELAR-KMGATRAVNVAKE-DLRDVM  224 (341)
T ss_pred             HHHHHHHHHc--CCCCCCeEEEEC-CCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHH-HhCCcEEecCccc-cHHHHH
Confidence            3445554432  346899999977 59999999999999999 6888888888888888 8999999988876 788888


Q ss_pred             HhHCCC-CccEEEeCCCc-hhHHHHHHhhccCCEEEEEecccccCCCCCCCccchHHHhhcceeEEEeeccccccchHHH
Q 028523           82 KRYFPE-GINIYFENVGG-KMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCLISKRIRMEGFLVPDYFHLYPKF  159 (208)
Q Consensus        82 ~~~~~~-~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (208)
                      .+.+.+ ++|++|||.|+ ..+..++++++++|+++.+|..+.     . ..........+++++.++....    ..+.
T Consensus       225 ~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-----~-~~~~~~~~~~~~~~l~~~~~~~----~~~~  294 (341)
T PRK05396        225 AELGMTEGFDVGLEMSGAPSAFRQMLDNMNHGGRIAMLGIPPG-----D-MAIDWNKVIFKGLTIKGIYGRE----MFET  294 (341)
T ss_pred             HHhcCCCCCCEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCC-----C-CcccHHHHhhcceEEEEEEccC----ccch
Confidence            877765 89999999884 678999999999999999987542     1 1122355666777777764322    1234


Q ss_pred             HHHHHHHHHCC-CceeeeeeeecCCcHHHHHHHHhcCCccceEEEEec
Q 028523          160 LEMMIPRIKEG-KIVYVEDKAEGLESAPAALVGLFSGRNVGKQVVEVA  206 (208)
Q Consensus       160 ~~~~~~~~~~g-~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~~  206 (208)
                      +..+.+++.++ .+.+.+.++++++++.++++.+.++. .||+|++++
T Consensus       295 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~a~~~~~~~~-~gk~vv~~~  341 (341)
T PRK05396        295 WYKMSALLQSGLDLSPIITHRFPIDDFQKGFEAMRSGQ-SGKVILDWD  341 (341)
T ss_pred             HHHHHHHHHcCCChhHheEEEEeHHHHHHHHHHHhcCC-CceEEEecC
Confidence            55678888888 45556778899999999999998877 799999864

>TIGR00692 tdh L-threonine 3-dehydrogenase

Probab=99.87  E-value=4.3e-20  Score=143.66  Aligned_cols=189  Identities=22%  Similarity=0.269  Sum_probs=147.1

Q ss_pred             chhhHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCE-EEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHH
Q 028523            2 PGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCY-VVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAA   80 (208)
Q Consensus         2 ~~~tA~~~l~~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g~~-v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~   80 (208)
                      ++.+||+++  .....+|++++|.| +|++|++++|+++.+|++ |+++.+++++.+.++ ++|++.++++.+. ++.+.
T Consensus       147 ~~~~a~~~~--~~~~~~g~~vlI~~-~g~vg~~a~~la~~~G~~~v~~~~~~~~~~~~~~-~~g~~~~v~~~~~-~~~~~  221 (340)
T TIGR00692       147 PLGNAVHTV--LAGPISGKSVLVTG-AGPIGLMAIAVAKASGAYPVIVSDPNEYRLELAK-KMGATYVVNPFKE-DVVKE  221 (340)
T ss_pred             hHHHHHHHH--HccCCCCCEEEEEC-CCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHH-HhCCcEEEccccc-CHHHH
Confidence            456778776  34578999999976 599999999999999996 888877888888888 8999888888776 78888


Q ss_pred             HHhHCCC-CccEEEeCCCc-hhHHHHHHhhccCCEEEEEecccccCCCCCCCccchHHHhhcceeEEEeeccccccchHH
Q 028523           81 LKRYFPE-GINIYFENVGG-KMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCLISKRIRMEGFLVPDYFHLYPK  158 (208)
Q Consensus        81 ~~~~~~~-~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  158 (208)
                      +.+..++ ++|+++||.|+ ..+...+++|+++|+++.+|.....    .... .....+.+++++.+....    ...+
T Consensus       222 l~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~g~~v~~g~~~~~----~~~~-~~~~~~~~~~~~~~~~~~----~~~~  292 (340)
T TIGR00692       222 VADLTDGEGVDVFLEMSGAPKALEQGLQAVTPGGRVSLLGLPPGK----VTID-FTNKVIFKGLTIYGITGR----HMFE  292 (340)
T ss_pred             HHHhcCCCCCCEEEECCCCHHHHHHHHHhhcCCCEEEEEccCCCC----cccc-hhhhhhhcceEEEEEecC----Cchh
Confidence            8777665 89999999884 6788999999999999999875321    1111 122445566666654421    2235


Q ss_pred             HHHHHHHHHHCCCce--eeeeeeecCCcHHHHHHHHhcCCccceEEEEe
Q 028523          159 FLEMMIPRIKEGKIV--YVEDKAEGLESAPAALVGLFSGRNVGKQVVEV  205 (208)
Q Consensus       159 ~~~~~~~~~~~g~~~--~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~  205 (208)
                      .+.++++++.+|.++  +.+.+.++++++.++++.+.++.. ||+|+++
T Consensus       293 ~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~-gkvvv~~  340 (340)
T TIGR00692       293 TWYTVSRLIQSGKLDLDPIITHKFKFDKFEKGFELMRSGQT-GKVILSL  340 (340)
T ss_pred             hHHHHHHHHHcCCCChHHheeeeeeHHHHHHHHHHHhcCCC-ceEEEeC
Confidence            577899999999987  446788999999999999998875 9999874

E. coli His-90 modulates substrate specificity and is believed part of the active site.

>cd08299 alcohol_DH_class_I_II_IV class I, II, IV alcohol dehydrogenases

Probab=99.87  E-value=7.9e-20  Score=143.73  Aligned_cols=194  Identities=18%  Similarity=0.166  Sum_probs=147.2

Q ss_pred             chhhHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHhcCCCeeEecCCCc-cHHH
Q 028523            2 PGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGC-YVVGSAGSKDKVDLLKNKFGFDEAFNYKEEP-DLDA   79 (208)
Q Consensus         2 ~~~tA~~~l~~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g~-~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~-~~~~   79 (208)
                      +++|||+++...+++++|++|+|+| +|++|++++|+++..|+ +|+++++++++.+.++ ++|++.++++.+.. +...
T Consensus       174 ~~~ta~~~~~~~~~~~~g~~VlV~G-~g~vG~~~~~~a~~~G~~~Vi~~~~~~~~~~~a~-~lGa~~~i~~~~~~~~~~~  251 (373)
T cd08299         174 GFSTGYGAAVNTAKVTPGSTCAVFG-LGGVGLSAIMGCKAAGASRIIAVDINKDKFAKAK-ELGATECINPQDYKKPIQE  251 (373)
T ss_pred             chHHHHHHHHhccCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHH-HcCCceEecccccchhHHH
Confidence            5789999987888999999999997 59999999999999999 8999999999999998 89999998876541 2666


Q ss_pred             HHHhHCCCCccEEEeCCCc-hhHHHHHHhh-ccCCEEEEEecccccCCCCCCCccchHHHhhcceeEEEeeccccccchH
Q 028523           80 ALKRYFPEGINIYFENVGG-KMLDAVLLNM-RIQGRITLCGMISQYNNDKPEGVHNLTCLISKRIRMEGFLVPDYFHLYP  157 (208)
Q Consensus        80 ~~~~~~~~~~d~v~d~~g~-~~~~~~~~~l-~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  157 (208)
                      .+.+.+++++|.++||+|+ ..+..++..+ +++|+++.+|.....    ........ .+.++.++.++....+.+  .
T Consensus       252 ~v~~~~~~~~d~vld~~g~~~~~~~~~~~~~~~~G~~v~~g~~~~~----~~~~~~~~-~~~~~~~i~~~~~~~~~~--~  324 (373)
T cd08299         252 VLTEMTDGGVDFSFEVIGRLDTMKAALASCHEGYGVSVIVGVPPSS----QNLSINPM-LLLTGRTWKGAVFGGWKS--K  324 (373)
T ss_pred             HHHHHhCCCCeEEEECCCCcHHHHHHHHhhccCCCEEEEEccCCCC----ceeecCHH-HHhcCCeEEEEEecCCcc--H
Confidence            6666665689999999995 6777766655 579999999975421    11122222 244677888877654321  3


Q ss_pred             HHHHHHHHHHHCCCce--eeeeeeecCCcHHHHHHHHhcCCccceEEEEe
Q 028523          158 KFLEMMIPRIKEGKIV--YVEDKAEGLESAPAALVGLFSGRNVGKQVVEV  205 (208)
Q Consensus       158 ~~~~~~~~~~~~g~~~--~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~  205 (208)
                      ..+.++++.+.++.++  +.++++|+++++.+|++.+.+++. .|+++++
T Consensus       325 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~e~~~a~~~~~~~~~-~k~~~~~  373 (373)
T cd08299         325 DSVPKLVADYMAKKFNLDPLITHTLPFEKINEGFDLLRSGKS-IRTVLTF  373 (373)
T ss_pred             HHHHHHHHHHHcCCCCchhheeeeecHHHHHHHHHHHhCCCc-ceEEEeC
Confidence            4455666777776544  446788999999999999887765 4777753

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group includes alcohol dehydrogenases corresponding to mammalian classes I, II, IV. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically

>cd08232 idonate-5-DH L-idonate 5-dehydrogenase

Probab=99.87  E-value=7e-20  Score=142.38  Aligned_cols=184  Identities=21%  Similarity=0.282  Sum_probs=144.6

Q ss_pred             chhhHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHH
Q 028523            2 PGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGC-YVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAA   80 (208)
Q Consensus         2 ~~~tA~~~l~~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g~-~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~   80 (208)
                      +++|||+++.+...+ ++++|||.| +|++|++++|+|+.+|+ +++++++++++.+.++ ++|.+.++++++. .+   
T Consensus       150 ~~~~a~~~l~~~~~~-~~~~VLI~g-~g~vG~~~~~lak~~G~~~v~~~~~s~~~~~~~~-~~g~~~vi~~~~~-~~---  222 (339)
T cd08232         150 PLAVALHAVNRAGDL-AGKRVLVTG-AGPIGALVVAAARRAGAAEIVATDLADAPLAVAR-AMGADETVNLARD-PL---  222 (339)
T ss_pred             hHHHHHHHHHhcCCC-CCCEEEEEC-CCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHH-HcCCCEEEcCCch-hh---
Confidence            567899999776666 999999977 59999999999999999 8999998888888777 8999889988754 32   


Q ss_pred             HHhHC-C-CCccEEEeCCCc-hhHHHHHHhhccCCEEEEEecccccCCCCCCCccchHHHhhcceeEEEeeccccccchH
Q 028523           81 LKRYF-P-EGINIYFENVGG-KMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCLISKRIRMEGFLVPDYFHLYP  157 (208)
Q Consensus        81 ~~~~~-~-~~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  157 (208)
                       .+.. . +++|+++|+.++ ..+...+++|+++|+++.+|..+.      .........+.+++++.+...      ..
T Consensus       223 -~~~~~~~~~vd~vld~~g~~~~~~~~~~~L~~~G~~v~~g~~~~------~~~~~~~~~~~~~~~~~~~~~------~~  289 (339)
T cd08232         223 -AAYAADKGDFDVVFEASGAPAALASALRVVRPGGTVVQVGMLGG------PVPLPLNALVAKELDLRGSFR------FD  289 (339)
T ss_pred             -hhhhccCCCccEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCC------CccCcHHHHhhcceEEEEEec------CH
Confidence             2222 2 269999999994 678999999999999999986431      112233344567777766542      14


Q ss_pred             HHHHHHHHHHHCCCcee--eeeeeecCCcHHHHHHHHhcCCccceEEEEe
Q 028523          158 KFLEMMIPRIKEGKIVY--VEDKAEGLESAPAALVGLFSGRNVGKQVVEV  205 (208)
Q Consensus       158 ~~~~~~~~~~~~g~~~~--~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~  205 (208)
                      +.++++++++.+|.+++  .+.++++++++.++++.+.++...||+|+++
T Consensus       290 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~  339 (339)
T cd08232         290 DEFAEAVRLLAAGRIDVRPLITAVFPLEEAAEAFALAADRTRSVKVQLSF  339 (339)
T ss_pred             HHHHHHHHHHHcCCCCchhheeEEecHHHHHHHHHHHHhCCCceeEEEeC
Confidence            46788899999998864  3567899999999999999888889999864

L-idonate 5-dehydrogenase (L-ido 5-DH ) catalyzes the conversion of L-lodonate to 5-ketogluconate in the metabolism of L-Idonate to 6-P-gluconate. In E. coli, this GntII pathway is a subsidiary pathway to the canonical GntI system, which also phosphorylates and transports gluconate. L-ido 5-DH is found in an operon with a regulator indR, transporter idnT, 5-keto-D-gluconate 5-reductase, and Gnt kinase. L-ido 5-DH is a zinc-dependent alcohol dehydrogenase-like protein. The alcohol dehydrogenase ADH-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) which displays a broad range of activities and are distinguished from the smaller short chain dehydrogenases(~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domai

>cd08247 AST1_like AST1 is a cytoplasmic protein associated with the periplasmic membrane in yeast

Probab=99.87  E-value=3.3e-20  Score=144.96  Aligned_cols=201  Identities=21%  Similarity=0.198  Sum_probs=142.4

Q ss_pred             chhhHHHHHHHhc-CCCCCCEEEEecCCchHHHHHHHHHHHc-CC-EEEEEeCCHHHHHHHHHhcCCCeeEecCCCcc--
Q 028523            2 PGMTAYAGFFEVC-SPKQGEYVFVSAASGAVGQLVGQFAKLV-GC-YVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPD--   76 (208)
Q Consensus         2 ~~~tA~~~l~~~~-~~~~g~~vli~ga~g~vG~~a~qla~~~-g~-~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~--   76 (208)
                      ++.|||+++...+ ++++|++++|+|+++++|++++|+|+.. +. +++++. ++++.+.++ ++|++.++++++. +  
T Consensus       134 ~~~ta~~~l~~~~~~~~~g~~vlI~ga~~~vg~~~~~~a~~~~~~~~v~~~~-~~~~~~~~~-~~g~~~~i~~~~~-~~~  210 (352)
T cd08247         134 VLGTAYQILEDLGQKLGPDSKVLVLGGSTSVGRFAIQLAKNHYNIGTVVGTC-SSRSAELNK-KLGADHFIDYDAH-SGV  210 (352)
T ss_pred             HHHHHHHHHHHhhhccCCCCeEEEECCCchHHHHHHHHHHhcCCcceEEEEe-ChhHHHHHH-HhCCCEEEecCCC-ccc
Confidence            4578999998877 8999999999999999999999999987 55 677776 566667776 8999889988765 4  


Q ss_pred             -HHHH-HHhHC-CCCccEEEeCCCc-hhHHHHHHhhc---cCCEEEEEecccccCCCCCCC-----ccchHHHhhcceeE
Q 028523           77 -LDAA-LKRYF-PEGINIYFENVGG-KMLDAVLLNMR---IQGRITLCGMISQYNNDKPEG-----VHNLTCLISKRIRM  144 (208)
Q Consensus        77 -~~~~-~~~~~-~~~~d~v~d~~g~-~~~~~~~~~l~---~~G~~v~~g~~~~~~~~~~~~-----~~~~~~~~~~~~~~  144 (208)
                       +..+ ++..+ ++++|.+|||.|+ .....++++++   ++|+++.++.....+......     .......+.+++++
T Consensus       211 ~~~~~~~~~~~~~~~~d~vl~~~g~~~~~~~~~~~l~~~~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  290 (352)
T cd08247         211 KLLKPVLENVKGQGKFDLILDCVGGYDLFPHINSILKPKSKNGHYVTIVGDYKANYKKDTFNSWDNPSANARKLFGSLGL  290 (352)
T ss_pred             chHHHHHHhhcCCCCceEEEECCCCHHHHHHHHHHhCccCCCCEEEEEeCCCcccccchhhhhccccchhhhhhhhhhcC
Confidence             4444 44444 3389999999997 68889999999   999999875322110000000     00001112223222


Q ss_pred             EEeecccc-ccchHHHHHHHHHHHHCCCceeeeeeeecCCcHHHHHHHHhcCCccceEEEEe
Q 028523          145 EGFLVPDY-FHLYPKFLEMMIPRIKEGKIVYVEDKAEGLESAPAALVGLFSGRNVGKQVVEV  205 (208)
Q Consensus       145 ~~~~~~~~-~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~  205 (208)
                      ........ .....+.+.++++++.++.+.+.+.+++++++++++++.+++++..||+++++
T Consensus       291 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~~  352 (352)
T cd08247         291 WSYNYQFFLLDPNADWIEKCAELIADGKVKPPIDSVYPFEDYKEAFERLKSNRAKGKVVIKV  352 (352)
T ss_pred             CCcceEEEEecCCHHHHHHHHHHHhCCCeEeeeccEecHHHHHHHHHHHHcCCCCCcEEEeC
Confidence            22211110 00113568889999999999888778899999999999999998889999864

This group contains members identified in targeting of yeast membrane proteins ATPase. AST1 is a cytoplasmic protein associated with the periplasmic membrane in yeast, identified as a multicopy suppressor of pma1 mutants which cause temperature sensitive growth arrest due to the inability of ATPase to target to the cell surface. This family is homologous to the medium chain family of dehydrogenases and reductases. Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-termi

>cd08271 MDR5 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=99.86  E-value=1.7e-19  Score=139.09  Aligned_cols=192  Identities=21%  Similarity=0.322  Sum_probs=153.2

Q ss_pred             chhhHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHHH
Q 028523            2 PGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAAL   81 (208)
Q Consensus         2 ~~~tA~~~l~~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~~   81 (208)
                      +++|||+++.+.+.+.+|++++|+|+++++|++++++++..|++|+++. ++++.+.+. .+|++.+++.... ++...+
T Consensus       125 ~~~~a~~~~~~~~~~~~g~~vlI~g~~~~ig~~~~~~a~~~g~~v~~~~-~~~~~~~~~-~~g~~~~~~~~~~-~~~~~~  201 (325)
T cd08271         125 AGLTAYQALFKKLRIEAGRTILITGGAGGVGSFAVQLAKRAGLRVITTC-SKRNFEYVK-SLGADHVIDYNDE-DVCERI  201 (325)
T ss_pred             hHHHHHHHHHHhcCCCCCCEEEEECCccHHHHHHHHHHHHcCCEEEEEE-cHHHHHHHH-HcCCcEEecCCCc-cHHHHH
Confidence            4678999998888999999999999989999999999999999999888 777888887 8999888887765 677777


Q ss_pred             HhHCCC-CccEEEeCCCchhHHHHHHhhccCCEEEEEecccccCCCCCCCccchHHHhhcceeEEEeecccc----c---
Q 028523           82 KRYFPE-GINIYFENVGGKMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCLISKRIRMEGFLVPDY----F---  153 (208)
Q Consensus        82 ~~~~~~-~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~---  153 (208)
                      .+...+ ++|.++++.++.....++++++++|+++.++.....     .    ....+..++.+....+...    +   
T Consensus       202 ~~~~~~~~~d~vi~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~-----~----~~~~~~~~~~~~~~~~~~~~~~~~~~~  272 (325)
T cd08271         202 KEITGGRGVDAVLDTVGGETAAALAPTLAFNGHLVCIQGRPDA-----S----PDPPFTRALSVHEVALGAAHDHGDPAA  272 (325)
T ss_pred             HHHcCCCCCcEEEECCCcHhHHHHHHhhccCCEEEEEcCCCCC-----c----chhHHhhcceEEEEEecccccccchhh
Confidence            777666 899999999987778899999999999998764321     0    1122344444444433221    1   


Q ss_pred             -cchHHHHHHHHHHHHCCCceeeeeeeecCCcHHHHHHHHhcCCccceEEEEe
Q 028523          154 -HLYPKFLEMMIPRIKEGKIVYVEDKAEGLESAPAALVGLFSGRNVGKQVVEV  205 (208)
Q Consensus       154 -~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~  205 (208)
                       ....+.+.++++++.++.+.+...+.++++++.++++.+.++...+|+++++
T Consensus       273 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~~~~~~~~~~~kiv~~~  325 (325)
T cd08271         273 WQDLRYAGEELLELLAAGKLEPLVIEVLPFEQLPEALRALKDRHTRGKIVVTI  325 (325)
T ss_pred             HHHHHHHHHHHHHHHHCCCeeeccceEEcHHHHHHHHHHHHcCCccceEEEEC
Confidence             2345667889999999999887678899999999999999888889999864

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd08234 threonine_DH_like L-threonine dehydrogenase

Probab=99.86  E-value=1.6e-19  Score=140.04  Aligned_cols=186  Identities=27%  Similarity=0.363  Sum_probs=146.9

Q ss_pred             chhhHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCE-EEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHH
Q 028523            2 PGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCY-VVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAA   80 (208)
Q Consensus         2 ~~~tA~~~l~~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g~~-v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~   80 (208)
                      +++++++++ ..+++.+|++|+|+| .|.+|++++|+|+..|++ |+++++++++.+.++ ++|.+.++++.+. +....
T Consensus       144 ~~~~a~~~l-~~~~~~~g~~vlI~g-~g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~-~~g~~~~~~~~~~-~~~~~  219 (334)
T cd08234         144 PLSCAVHGL-DLLGIKPGDSVLVFG-AGPIGLLLAQLLKLNGASRVTVAEPNEEKLELAK-KLGATETVDPSRE-DPEAQ  219 (334)
T ss_pred             HHHHHHHHH-HhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHH-HhCCeEEecCCCC-CHHHH
Confidence            456888888 778999999999997 599999999999999997 888998999999997 8998888888765 55444


Q ss_pred             HHhHCCCCccEEEeCCC-chhHHHHHHhhccCCEEEEEecccccCCCCCCCccchHHHhhcceeEEEeeccccccchHHH
Q 028523           81 LKRYFPEGINIYFENVG-GKMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCLISKRIRMEGFLVPDYFHLYPKF  159 (208)
Q Consensus        81 ~~~~~~~~~d~v~d~~g-~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (208)
                       +...++++|+++|+.+ ...+..++++|+++|+++.+|.....    ..........+.+++++.+....      .+.
T Consensus       220 -~~~~~~~vd~v~~~~~~~~~~~~~~~~l~~~G~~v~~g~~~~~----~~~~~~~~~~~~~~~~~~~~~~~------~~~  288 (334)
T cd08234         220 -KEDNPYGFDVVIEATGVPKTLEQAIEYARRGGTVLVFGVYAPD----ARVSISPFEIFQKELTIIGSFIN------PYT  288 (334)
T ss_pred             -HHhcCCCCcEEEECCCChHHHHHHHHHHhcCCEEEEEecCCCC----CCcccCHHHHHhCCcEEEEeccC------HHH
Confidence             3333348999999998 46888999999999999999875421    11223334444567777766532      456


Q ss_pred             HHHHHHHHHCCCceee--eeeeecCCcHHHHHHHHhcCCccceEEE
Q 028523          160 LEMMIPRIKEGKIVYV--EDKAEGLESAPAALVGLFSGRNVGKQVV  203 (208)
Q Consensus       160 ~~~~~~~~~~g~~~~~--~~~~~~~~~~~~a~~~~~~~~~~gk~vv  203 (208)
                      ++++++++.++.+.+.  +..+++++++.++++.+.+ ...+|+|+
T Consensus       289 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~-~~~~k~vi  333 (334)
T cd08234         289 FPRAIALLESGKIDVKGLVSHRLPLEEVPEALEGMRS-GGALKVVV  333 (334)
T ss_pred             HHHHHHHHHcCCCChhhhEEEEecHHHHHHHHHHHhc-CCceEEEe
Confidence            7889999999998753  5678999999999999998 77789886

L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine, via NAD(H)-dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose.

>cd05281 TDH Threonine dehydrogenase

Probab=99.86  E-value=9.5e-20  Score=141.77  Aligned_cols=186  Identities=24%  Similarity=0.295  Sum_probs=144.9

Q ss_pred             hhhHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHHH
Q 028523            3 GMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGC-YVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAAL   81 (208)
Q Consensus         3 ~~tA~~~l~~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g~-~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~~   81 (208)
                      +.++|+++.  ...++|++|+|.| .|++|++++|+++..|. +|+++++++++.+.++ ++|.+.++++++. ++. .+
T Consensus       150 ~~~a~~~~~--~~~~~g~~vlV~g-~g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~-~~g~~~~~~~~~~-~~~-~~  223 (341)
T cd05281         150 LGNAVHTVL--AGDVSGKSVLITG-CGPIGLMAIAVAKAAGASLVIASDPNPYRLELAK-KMGADVVINPREE-DVV-EV  223 (341)
T ss_pred             HHHHHHHHH--hcCCCCCEEEEEC-CCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHH-HhCcceeeCcccc-cHH-HH
Confidence            456777763  4567899999977 59999999999999999 7999988888888888 8999888888765 677 77


Q ss_pred             HhHCCC-CccEEEeCCCc-hhHHHHHHhhccCCEEEEEecccccCCCCCCCccc-hHHHhhcceeEEEeeccccccchHH
Q 028523           82 KRYFPE-GINIYFENVGG-KMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHN-LTCLISKRIRMEGFLVPDYFHLYPK  158 (208)
Q Consensus        82 ~~~~~~-~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~  158 (208)
                      .+..++ ++|++||++|+ .....++++|+++|+++.+|....     . .... ......+++.+.+.....    ..+
T Consensus       224 ~~~~~~~~vd~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-----~-~~~~~~~~~~~~~~~~~~~~~~~----~~~  293 (341)
T cd05281         224 KSVTDGTGVDVVLEMSGNPKAIEQGLKALTPGGRVSILGLPPG-----P-VDIDLNNLVIFKGLTVQGITGRK----MFE  293 (341)
T ss_pred             HHHcCCCCCCEEEECCCCHHHHHHHHHHhccCCEEEEEccCCC-----C-cccccchhhhccceEEEEEecCC----cch
Confidence            777776 89999999985 678899999999999999986542     1 1111 123455666666654321    234


Q ss_pred             HHHHHHHHHHCCCce--eeeeeeecCCcHHHHHHHHhcCCccceEEEEe
Q 028523          159 FLEMMIPRIKEGKIV--YVEDKAEGLESAPAALVGLFSGRNVGKQVVEV  205 (208)
Q Consensus       159 ~~~~~~~~~~~g~~~--~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~  205 (208)
                      .+.++.+++.+|.+.  +.+..+++++++.++++.+.++. .||+|+++
T Consensus       294 ~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~-~gk~vv~~  341 (341)
T cd05281         294 TWYQVSALLKSGKVDLSPVITHKLPLEDFEEAFELMRSGK-CGKVVLYP  341 (341)
T ss_pred             hHHHHHHHHHcCCCChhHheEEEecHHHHHHHHHHHhcCC-CceEEecC
Confidence            577888999999886  34566789999999999999998 89999864

L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)- dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria) and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose.

>cd08273 MDR8 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=99.86  E-value=8e-20  Score=141.48  Aligned_cols=194  Identities=24%  Similarity=0.290  Sum_probs=145.1

Q ss_pred             chhhHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHHH
Q 028523            2 PGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAAL   81 (208)
Q Consensus         2 ~~~tA~~~l~~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~~   81 (208)
                      +++|||+++...+.+.+|++++|+|++|++|++++|+++..|++|++++. +++.+.++ ++|+.. +++... ++... 
T Consensus       123 ~~~ta~~~l~~~~~~~~g~~vlI~g~~g~ig~~~~~~a~~~g~~v~~~~~-~~~~~~~~-~~g~~~-~~~~~~-~~~~~-  197 (331)
T cd08273         123 NYVTAYQMLHRAAKVLTGQRVLIHGASGGVGQALLELALLAGAEVYGTAS-ERNHAALR-ELGATP-IDYRTK-DWLPA-  197 (331)
T ss_pred             HHHHHHHHHHHhcCCCCCCEEEEECCCcHHHHHHHHHHHHcCCEEEEEeC-HHHHHHHH-HcCCeE-EcCCCc-chhhh-
Confidence            46789999988889999999999999999999999999999999999996 88888887 899643 455443 44433 


Q ss_pred             HhHCCCCccEEEeCCCchhHHHHHHhhccCCEEEEEecccccCCCCCCCccch------------HHHhhcceeEEEeec
Q 028523           82 KRYFPEGINIYFENVGGKMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNL------------TCLISKRIRMEGFLV  149 (208)
Q Consensus        82 ~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~  149 (208)
                       ...++++|.++|++++..+..++++++++|+++.+|.....+..  ......            ...+.+++++.....
T Consensus       198 -~~~~~~~d~vl~~~~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  274 (331)
T cd08273         198 -MLTPGGVDVVFDGVGGESYEESYAALAPGGTLVCYGGNSSLLQG--RRSLAALGSLLARLAKLKLLPTGRRATFYYVWR  274 (331)
T ss_pred             -hccCCCceEEEECCchHHHHHHHHHhcCCCEEEEEccCCCCCCc--cccccchhhhhhhhhhhcceeccceeEEEeech
Confidence             23334799999999987799999999999999999876532110  000000            011222333333322


Q ss_pred             ccc--ccchHHHHHHHHHHHHCCCceeeeeeeecCCcHHHHHHHHhcCCccceEEE
Q 028523          150 PDY--FHLYPKFLEMMIPRIKEGKIVYVEDKAEGLESAPAALVGLFSGRNVGKQVV  203 (208)
Q Consensus       150 ~~~--~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv  203 (208)
                      ...  +....+.+.++++++.+|.+.+.+.++++++++.++++.+.++...||+|+
T Consensus       275 ~~~~~p~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~~~~~~~~~gkvv~  330 (331)
T cd08273         275 DRAEDPKLFRQDLTELLDLLAKGKIRPKIAKRLPLSEVAEAHRLLESGKVVGKIVL  330 (331)
T ss_pred             hcccCHHHHHHHHHHHHHHHHCCCccCCcceEEcHHHHHHHHHHHHcCCCcceEEe
Confidence            110  233457889999999999998877788999999999999998888889886

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd08275 MDR3 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=99.86  E-value=2.3e-19  Score=139.10  Aligned_cols=201  Identities=28%  Similarity=0.402  Sum_probs=155.5

Q ss_pred             chhhHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHH
Q 028523            2 PGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLV-GCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAA   80 (208)
Q Consensus         2 ~~~tA~~~l~~~~~~~~g~~vli~ga~g~vG~~a~qla~~~-g~~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~   80 (208)
                      +++|||+++...+.+++|++|+|+|++|++|++++++++.. +..++... .+++.+.++ .+|.+.++++.+. ++...
T Consensus       122 ~~~~a~~~~~~~~~~~~~~~vli~g~~g~~g~~~~~~a~~~~~~~~~~~~-~~~~~~~~~-~~g~~~~~~~~~~-~~~~~  198 (337)
T cd08275         122 NYLTAYYALFELGNLRPGQSVLVHSAAGGVGLAAGQLCKTVPNVTVVGTA-SASKHEALK-ENGVTHVIDYRTQ-DYVEE  198 (337)
T ss_pred             HHHHHHHHHHHhhCCCCCCEEEEEcCcchHHHHHHHHHHHccCcEEEEeC-CHHHHHHHH-HcCCcEEeeCCCC-cHHHH
Confidence            56789999988899999999999999999999999999998 43443332 455777887 8999888888776 77777


Q ss_pred             HHhHCCCCccEEEeCCCchhHHHHHHhhccCCEEEEEecccccCCCCC-----------CCccchHHHhhcceeEEEeec
Q 028523           81 LKRYFPEGINIYFENVGGKMLDAVLLNMRIQGRITLCGMISQYNNDKP-----------EGVHNLTCLISKRIRMEGFLV  149 (208)
Q Consensus        81 ~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~  149 (208)
                      ++..+++++|+++|++|+.....++++++++|+++.+|.....+....           .........+.+++++.++..
T Consensus       199 ~~~~~~~~~d~v~~~~g~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  278 (337)
T cd08275         199 VKKISPEGVDIVLDALGGEDTRKSYDLLKPMGRLVVYGAANLVTGEKRSWFKLAKKWWNRPKVDPMKLISENKSVLGFNL  278 (337)
T ss_pred             HHHHhCCCceEEEECCcHHHHHHHHHhhccCcEEEEEeecCCcCcccccccccccccccccccCHHHHhhcCceEEEeec
Confidence            877765589999999998888999999999999999987542110000           011122355678888888775


Q ss_pred             ccc---ccchHHHHHHHHHHHHCCCceeeeeeeecCCcHHHHHHHHhcCCccceEEEEe
Q 028523          150 PDY---FHLYPKFLEMMIPRIKEGKIVYVEDKAEGLESAPAALVGLFSGRNVGKQVVEV  205 (208)
Q Consensus       150 ~~~---~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~  205 (208)
                      ...   .......+.++.+++.++.+.+.....+++++++++++.+.++...+|+++++
T Consensus       279 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kvv~~~  337 (337)
T cd08275         279 GWLFEERELLTEVMDKLLKLYEEGKIKPKIDSVFPFEEVGEAMRRLQSRKNIGKVVLTP  337 (337)
T ss_pred             hhhhhChHHHHHHHHHHHHHHHCCCCCCceeeEEcHHHHHHHHHHHHcCCCcceEEEeC
Confidence            432   11223467888899999999887778899999999999999988889999864

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd08242 MDR_like Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=99.86  E-value=7.9e-20  Score=140.94  Aligned_cols=175  Identities=20%  Similarity=0.217  Sum_probs=138.7

Q ss_pred             hhHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHHHHh
Q 028523            4 MTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKR   83 (208)
Q Consensus         4 ~tA~~~l~~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~   83 (208)
                      .++|.++ +..++++|++|+|+| +|++|++++|+|+.+|++|++++.++++.+.++ ++|++.++++++.         
T Consensus       142 ~~~~~~~-~~~~~~~g~~vlV~g-~g~vg~~~~q~a~~~G~~vi~~~~~~~~~~~~~-~~g~~~~~~~~~~---------  209 (319)
T cd08242         142 AAALEIL-EQVPITPGDKVAVLG-DGKLGLLIAQVLALTGPDVVLVGRHSEKLALAR-RLGVETVLPDEAE---------  209 (319)
T ss_pred             HHHHHHH-HhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCeEEEEcCCHHHHHHHH-HcCCcEEeCcccc---------
Confidence            3455555 678899999999997 699999999999999999999999999999999 7999887766431         


Q ss_pred             HCCCCccEEEeCCCc-hhHHHHHHhhccCCEEEEEecccccCCCCCCCccchHHHhhcceeEEEeeccccccchHHHHHH
Q 028523           84 YFPEGINIYFENVGG-KMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCLISKRIRMEGFLVPDYFHLYPKFLEM  162 (208)
Q Consensus        84 ~~~~~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  162 (208)
                      ..+.++|+++||.|+ ..+..++++++++|+++..+....      ....+....+.++.++.+.....        +++
T Consensus       210 ~~~~~~d~vid~~g~~~~~~~~~~~l~~~g~~v~~~~~~~------~~~~~~~~~~~~~~~i~~~~~~~--------~~~  275 (319)
T cd08242         210 SEGGGFDVVVEATGSPSGLELALRLVRPRGTVVLKSTYAG------PASFDLTKAVVNEITLVGSRCGP--------FAP  275 (319)
T ss_pred             ccCCCCCEEEECCCChHHHHHHHHHhhcCCEEEEEcccCC------CCccCHHHheecceEEEEEeccc--------HHH
Confidence            122379999999985 678899999999999998665431      12234445566777777765432        677


Q ss_pred             HHHHHHCCCc--eeeeeeeecCCcHHHHHHHHhcCCccceEEEEe
Q 028523          163 MIPRIKEGKI--VYVEDKAEGLESAPAALVGLFSGRNVGKQVVEV  205 (208)
Q Consensus       163 ~~~~~~~g~~--~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~  205 (208)
                      +.++++++.+  .+.+.++|+++++.+|++.+.++. .+|+||++
T Consensus       276 ~~~~~~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~-~~k~vi~~  319 (319)
T cd08242         276 ALRLLRKGLVDVDPLITAVYPLEEALEAFERAAEPG-ALKVLLRP  319 (319)
T ss_pred             HHHHHHcCCCChhhceEEEEeHHHHHHHHHHHhcCC-ceEEEeCC
Confidence            8899999998  455778999999999999998776 47998863

This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family, including threonine dehydrogenase. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reducta

>cd08264 Zn_ADH_like2 Alcohol dehydrogenases of the MDR family

Probab=99.85  E-value=1.5e-19  Score=139.78  Aligned_cols=178  Identities=30%  Similarity=0.350  Sum_probs=138.3

Q ss_pred             chhhHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHHH
Q 028523            2 PGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAAL   81 (208)
Q Consensus         2 ~~~tA~~~l~~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~~   81 (208)
                      ++.|||+++.. +++++|++++|+|++|++|++++++|+.+|++|+++++    .+.++ ++|+++++++++   ..+.+
T Consensus       147 ~~~~a~~~l~~-~~~~~g~~vlI~g~~g~vg~~~~~~a~~~G~~v~~~~~----~~~~~-~~g~~~~~~~~~---~~~~l  217 (325)
T cd08264         147 AALTAYHALKT-AGLGPGETVVVFGASGNTGIFAVQLAKMMGAEVIAVSR----KDWLK-EFGADEVVDYDE---VEEKV  217 (325)
T ss_pred             hhHHHHHHHHh-cCCCCCCEEEEECCCchHHHHHHHHHHHcCCeEEEEeH----HHHHH-HhCCCeeecchH---HHHHH
Confidence            46789999855 88999999999999999999999999999999988873    36666 899988887653   34556


Q ss_pred             HhHCCCCccEEEeCCCchhHHHHHHhhccCCEEEEEecccccCCCCCCCccchHHHhhcceeEEEeeccccccchHHHHH
Q 028523           82 KRYFPEGINIYFENVGGKMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCLISKRIRMEGFLVPDYFHLYPKFLE  161 (208)
Q Consensus        82 ~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  161 (208)
                      ++.+ +++|+++|++|+..+..++++|+++|+++.+|....     .....+...++.++.++.+.....     ++.++
T Consensus       218 ~~~~-~~~d~vl~~~g~~~~~~~~~~l~~~g~~v~~g~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~  286 (325)
T cd08264         218 KEIT-KMADVVINSLGSSFWDLSLSVLGRGGRLVTFGTLTG-----GEVKLDLSDLYSKQISIIGSTGGT-----RKELL  286 (325)
T ss_pred             HHHh-CCCCEEEECCCHHHHHHHHHhhccCCEEEEEecCCC-----CCCccCHHHHhhcCcEEEEccCCC-----HHHHH
Confidence            6555 679999999998899999999999999999987421     112334455555666666654433     45677


Q ss_pred             HHHHHHHCCCceeeeeeeecCCcHHHHHHHHhcCCccceE
Q 028523          162 MMIPRIKEGKIVYVEDKAEGLESAPAALVGLFSGRNVGKQ  201 (208)
Q Consensus       162 ~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~  201 (208)
                      ++++++....  ..+.++|+++++++|++.+.++...+|+
T Consensus       287 ~~~~l~~~~~--~~~~~~~~~~~~~~a~~~~~~~~~~~kv  324 (325)
T cd08264         287 ELVKIAKDLK--VKVWKTFKLEEAKEALKELFSKERDGRI  324 (325)
T ss_pred             HHHHHHHcCC--ceeEEEEcHHHHHHHHHHHHcCCCcccc
Confidence            7888885443  4566789999999999999988777775

This group resembles the zinc-dependent alcohol dehydrogenases of the medium chain dehydrogenase family. However, this subgroup does not contain the characteristic catalytic zinc site. Also, it contains an atypical structural zinc-binding pattern: DxxCxxCxxxxxxxC. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the clo

>PLN02702 L-idonate 5-dehydrogenase

Probab=99.85  E-value=5.4e-19  Score=138.68  Aligned_cols=186  Identities=19%  Similarity=0.250  Sum_probs=144.3

Q ss_pred             hhhHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCE-EEEEeCCHHHHHHHHHhcCCCeeEecC--CCccHHH
Q 028523            3 GMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCY-VVGSAGSKDKVDLLKNKFGFDEAFNYK--EEPDLDA   79 (208)
Q Consensus         3 ~~tA~~~l~~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g~~-v~~~~~s~~~~~~~~~~~g~~~v~~~~--~~~~~~~   79 (208)
                      ..++|+++ ...++.+|++|+|+| .|++|++++|+++..|++ ++++++++++.+.++ ++|++.++++.  +. ++.+
T Consensus       167 ~~~a~~~~-~~~~~~~g~~vlI~g-~g~vG~~~~~~a~~~G~~~v~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~-~~~~  242 (364)
T PLN02702        167 LSVGVHAC-RRANIGPETNVLVMG-AGPIGLVTMLAARAFGAPRIVIVDVDDERLSVAK-QLGADEIVLVSTNIE-DVES  242 (364)
T ss_pred             HHHHHHHH-HhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHH-HhCCCEEEecCcccc-cHHH
Confidence            34577777 668899999999997 599999999999999994 777777888888888 89998877654  23 5666


Q ss_pred             HHHhH---CCCCccEEEeCCC-chhHHHHHHhhccCCEEEEEecccccCCCCCCCccchHHHhhcceeEEEeeccccccc
Q 028523           80 ALKRY---FPEGINIYFENVG-GKMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCLISKRIRMEGFLVPDYFHL  155 (208)
Q Consensus        80 ~~~~~---~~~~~d~v~d~~g-~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  155 (208)
                      ++.+.   .++++|++||++| ...+..++++++++|+++.+|....     . ..........+++++.+++..     
T Consensus       243 ~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-----~-~~~~~~~~~~~~~~i~~~~~~-----  311 (364)
T PLN02702        243 EVEEIQKAMGGGIDVSFDCVGFNKTMSTALEATRAGGKVCLVGMGHN-----E-MTVPLTPAAAREVDVVGVFRY-----  311 (364)
T ss_pred             HHHHHhhhcCCCCCEEEECCCCHHHHHHHHHHHhcCCEEEEEccCCC-----C-CcccHHHHHhCccEEEEeccC-----
Confidence            66544   2337999999999 5789999999999999999986432     1 122344566778888776542     


Q ss_pred             hHHHHHHHHHHHHCCCce--eeeeeeecC--CcHHHHHHHHhcCCccceEEEE
Q 028523          156 YPKFLEMMIPRIKEGKIV--YVEDKAEGL--ESAPAALVGLFSGRNVGKQVVE  204 (208)
Q Consensus       156 ~~~~~~~~~~~~~~g~~~--~~~~~~~~~--~~~~~a~~~~~~~~~~gk~vv~  204 (208)
                       ...+..+++++.++.+.  +.+.++|++  +++.+|++.+.+++..+|+|+.
T Consensus       312 -~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~a~~~~~~~~~~~kvv~~  363 (364)
T PLN02702        312 -RNTWPLCLEFLRSGKIDVKPLITHRFGFSQKEVEEAFETSARGGNAIKVMFN  363 (364)
T ss_pred             -hHHHHHHHHHHHcCCCCchHheEEEeccChHHHHHHHHHHhcCCCceEEEEe
Confidence             24567889999999885  345677555  7999999999988888999985

>cd08248 RTN4I1 Human Reticulon 4 Interacting Protein 1

Probab=99.85  E-value=1.1e-19  Score=141.72  Aligned_cols=198  Identities=26%  Similarity=0.374  Sum_probs=141.6

Q ss_pred             chhhHHHHHHHhcCCCC----CCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeEecCCCccH
Q 028523            2 PGMTAYAGFFEVCSPKQ----GEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDL   77 (208)
Q Consensus         2 ~~~tA~~~l~~~~~~~~----g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~   77 (208)
                      +++|||+++.+.+.+.+    |++++|+|++|++|++++++++.+|++|++++++ ++.+.++ ++|.+.+++..+. ++
T Consensus       142 ~~~ta~~~l~~~~~~~~~~~~g~~vlI~g~~g~ig~~~~~~a~~~G~~v~~~~~~-~~~~~~~-~~g~~~~~~~~~~-~~  218 (350)
T cd08248         142 AGLTAWSALVNVGGLNPKNAAGKRVLILGGSGGVGTFAIQLLKAWGAHVTTTCST-DAIPLVK-SLGADDVIDYNNE-DF  218 (350)
T ss_pred             HHHHHHHHHHHhccCCCccCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCc-chHHHHH-HhCCceEEECCCh-hH
Confidence            46789999988777754    9999999999999999999999999999988855 5667777 8999888887664 55


Q ss_pred             HHHHHhHCCCCccEEEeCCCchhHHHHHHhhccCCEEEEEecccccCCCC-CC--Cccc-hHHHhhccee-EE-Eeec-c
Q 028523           78 DAALKRYFPEGINIYFENVGGKMLDAVLLNMRIQGRITLCGMISQYNNDK-PE--GVHN-LTCLISKRIR-ME-GFLV-P  150 (208)
Q Consensus        78 ~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~-~~--~~~~-~~~~~~~~~~-~~-~~~~-~  150 (208)
                      ...+...  +++|++||+.|++....++++++++|+++.+|..+..+... ..  .... ...+...... +. .... .
T Consensus       219 ~~~l~~~--~~vd~vi~~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  296 (350)
T cd08248         219 EEELTER--GKFDVILDTVGGDTEKWALKLLKKGGTYVTLVSPLLKNTDKLGLVGGMLKSAVDLLKKNVKSLLKGSHYRW  296 (350)
T ss_pred             HHHHHhc--CCCCEEEECCChHHHHHHHHHhccCCEEEEecCCcccccccccccchhhhhHHHHHHHHHHHHhcCCCeeE
Confidence            5544432  37999999999888999999999999999998643210000 00  0000 0001111100 00 0000 0


Q ss_pred             ccccchHHHHHHHHHHHHCCCceeeeeeeecCCcHHHHHHHHhcCCccceEEEE
Q 028523          151 DYFHLYPKFLEMMIPRIKEGKIVYVEDKAEGLESAPAALVGLFSGRNVGKQVVE  204 (208)
Q Consensus       151 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~  204 (208)
                      .........+.++++++.+|.+.+.+.+.++++++.++++.+.++...+|++++
T Consensus       297 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~vv~~  350 (350)
T cd08248         297 GFFSPSGSALDELAKLVEDGKIKPVIDKVFPFEEVPEAYEKVESGHARGKTVIK  350 (350)
T ss_pred             EEECCCHHHHHHHHHHHhCCCEecccceeecHHHHHHHHHHHhcCCCceEEEeC
Confidence            001123567888999999999988878899999999999999988877888863

Human Reticulon 4 Interacting Protein 1 is a member of the medium chain dehydrogenase/ reductase (MDR) family. Riticulons are endoplasmic reticulum associated proteins involved in membrane trafficking and neuroendocrine secretion. The MDR/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.

>cd05289 MDR_like_2 alcohol dehydrogenase and quinone reductase-like medium chain degydrogenases/reductases

Probab=99.84  E-value=4.5e-19  Score=135.68  Aligned_cols=182  Identities=28%  Similarity=0.426  Sum_probs=145.6

Q ss_pred             chhhHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHHH
Q 028523            2 PGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAAL   81 (208)
Q Consensus         2 ~~~tA~~~l~~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~~   81 (208)
                      ++.+||+++...+.+.+|++++|+|++|++|++++++++..|++|+++++++ +.+.++ ++|.+.++++... ++..  
T Consensus       128 ~~~~a~~~~~~~~~~~~~~~vlv~g~~g~~g~~~~~~a~~~g~~v~~~~~~~-~~~~~~-~~g~~~~~~~~~~-~~~~--  202 (309)
T cd05289         128 AGLTAWQALFELGGLKAGQTVLIHGAAGGVGSFAVQLAKARGARVIATASAA-NADFLR-SLGADEVIDYTKG-DFER--  202 (309)
T ss_pred             HHHHHHHHHHhhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecch-hHHHHH-HcCCCEEEeCCCC-chhh--
Confidence            3578899998877899999999999999999999999999999999999777 778887 8998888877664 4433  


Q ss_pred             HhHCCCCccEEEeCCCchhHHHHHHhhccCCEEEEEecccccCCCCCCCccchHHHhhcceeEEEeeccccccchHHHHH
Q 028523           82 KRYFPEGINIYFENVGGKMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCLISKRIRMEGFLVPDYFHLYPKFLE  161 (208)
Q Consensus        82 ~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  161 (208)
                       ...+.++|.+++++++.....++++++++|+++.+|....     .   ..  ..+.+++++.......  .  .+.+.
T Consensus       203 -~~~~~~~d~v~~~~~~~~~~~~~~~l~~~g~~v~~g~~~~-----~---~~--~~~~~~~~~~~~~~~~--~--~~~~~  267 (309)
T cd05289         203 -AAAPGGVDAVLDTVGGETLARSLALVKPGGRLVSIAGPPP-----A---EQ--AAKRRGVRAGFVFVEP--D--GEQLA  267 (309)
T ss_pred             -ccCCCCceEEEECCchHHHHHHHHHHhcCcEEEEEcCCCc-----c---hh--hhhhccceEEEEEecc--c--HHHHH
Confidence             2222379999999998888999999999999999987442     1   00  3344566665554421  1  56788


Q ss_pred             HHHHHHHCCCceeeeeeeecCCcHHHHHHHHhcCCccceEEE
Q 028523          162 MMIPRIKEGKIVYVEDKAEGLESAPAALVGLFSGRNVGKQVV  203 (208)
Q Consensus       162 ~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv  203 (208)
                      ++++++.++.+.+.+++.++++++.++++.+..+...+|+++
T Consensus       268 ~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~kvv~  309 (309)
T cd05289         268 ELAELVEAGKLRPVVDRVFPLEDAAEAHERLESGHARGKVVL  309 (309)
T ss_pred             HHHHHHHCCCEEEeeccEEcHHHHHHHHHHHHhCCCCCcEeC
Confidence            899999999998877889999999999999998887788774

Members identified as zinc-dependent alcohol dehydrogenases and quinone oxidoreductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts et

>cd08245 CAD Cinnamyl alcohol dehydrogenases (CAD) and related proteins

Probab=99.84  E-value=9.1e-19  Score=135.64  Aligned_cols=183  Identities=27%  Similarity=0.312  Sum_probs=144.5

Q ss_pred             chhhHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHHH
Q 028523            2 PGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAAL   81 (208)
Q Consensus         2 ~~~tA~~~l~~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~~   81 (208)
                      +++|||+++.. .++.++++|+|+|+ |++|++++++++..|++|+++++++++.+.++ ++|++.++++.+. ..... 
T Consensus       147 ~~~ta~~~l~~-~~~~~~~~vlI~g~-g~iG~~~~~~a~~~G~~v~~~~~~~~~~~~~~-~~g~~~~~~~~~~-~~~~~-  221 (330)
T cd08245         147 AGITVYSALRD-AGPRPGERVAVLGI-GGLGHLAVQYARAMGFETVAITRSPDKRELAR-KLGADEVVDSGAE-LDEQA-  221 (330)
T ss_pred             hHHHHHHHHHh-hCCCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HhCCcEEeccCCc-chHHh-
Confidence            46789999965 78999999999974 78999999999999999999999999999997 8998888876654 32222 


Q ss_pred             HhHCCCCccEEEeCCC-chhHHHHHHhhccCCEEEEEecccccCCCCCCCccchHHHhhcceeEEEeeccccccchHHHH
Q 028523           82 KRYFPEGINIYFENVG-GKMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCLISKRIRMEGFLVPDYFHLYPKFL  160 (208)
Q Consensus        82 ~~~~~~~~d~v~d~~g-~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (208)
                         ..+++|+++|+.+ ......++++|+++|+++.++.....     ....+...++.++.++.++....     ...+
T Consensus       222 ---~~~~~d~vi~~~~~~~~~~~~~~~l~~~G~~i~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~-----~~~~  288 (330)
T cd08245         222 ---AAGGADVILVTVVSGAAAEAALGGLRRGGRIVLVGLPESP-----PFSPDIFPLIMKRQSIAGSTHGG-----RADL  288 (330)
T ss_pred             ---ccCCCCEEEECCCcHHHHHHHHHhcccCCEEEEECCCCCC-----ccccchHHHHhCCCEEEEeccCC-----HHHH
Confidence               2237999999987 57888999999999999999865321     11122344556677776666533     4568


Q ss_pred             HHHHHHHHCCCceeeeeeeecCCcHHHHHHHHhcCCccceEEE
Q 028523          161 EMMIPRIKEGKIVYVEDKAEGLESAPAALVGLFSGRNVGKQVV  203 (208)
Q Consensus       161 ~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv  203 (208)
                      +++++++.++.+.+ ....++++++.++++.+.++...+|+|+
T Consensus       289 ~~~~~ll~~~~l~~-~~~~~~~~~~~~a~~~~~~~~~~~~~v~  330 (330)
T cd08245         289 QEALDFAAEGKVKP-MIETFPLDQANEAYERMEKGDVRFRFVL  330 (330)
T ss_pred             HHHHHHHHcCCCcc-eEEEEcHHHHHHHHHHHHcCCCCcceeC
Confidence            88899999999886 4467999999999999999988888875

Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an

>cd08298 CAD2 Cinnamyl alcohol dehydrogenases (CAD)

Probab=99.84  E-value=6.3e-19  Score=136.46  Aligned_cols=177  Identities=22%  Similarity=0.213  Sum_probs=139.6

Q ss_pred             chhhHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHHH
Q 028523            2 PGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAAL   81 (208)
Q Consensus         2 ~~~tA~~~l~~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~~   81 (208)
                      +++|||+++ +.++++++++++|+| +|++|++++|+++..|++|+++++++++.+.++ ++|++.++++++.       
T Consensus       152 ~~~ta~~~~-~~~~~~~~~~vlV~g-~g~vg~~~~~la~~~g~~v~~~~~~~~~~~~~~-~~g~~~~~~~~~~-------  221 (329)
T cd08298         152 AGIIGYRAL-KLAGLKPGQRLGLYG-FGASAHLALQIARYQGAEVFAFTRSGEHQELAR-ELGADWAGDSDDL-------  221 (329)
T ss_pred             hhHHHHHHH-HhhCCCCCCEEEEEC-CcHHHHHHHHHHHHCCCeEEEEcCChHHHHHHH-HhCCcEEeccCcc-------
Confidence            568999999 889999999999997 699999999999999999999999999999997 8999877766532       


Q ss_pred             HhHCCCCccEEEeCCC-chhHHHHHHhhccCCEEEEEecccccCCCCCCCccchHHHhhcceeEEEeeccccccchHHHH
Q 028523           82 KRYFPEGINIYFENVG-GKMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCLISKRIRMEGFLVPDYFHLYPKFL  160 (208)
Q Consensus        82 ~~~~~~~~d~v~d~~g-~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (208)
                         .+.++|.++++.+ +..+..++++++++|+++.+|....     .....+. ..+.++..+.+....     ..+.+
T Consensus       222 ---~~~~vD~vi~~~~~~~~~~~~~~~l~~~G~~v~~g~~~~-----~~~~~~~-~~~~~~~~i~~~~~~-----~~~~~  287 (329)
T cd08298         222 ---PPEPLDAAIIFAPVGALVPAALRAVKKGGRVVLAGIHMS-----DIPAFDY-ELLWGEKTIRSVANL-----TRQDG  287 (329)
T ss_pred             ---CCCcccEEEEcCCcHHHHHHHHHHhhcCCEEEEEcCCCC-----CCCccch-hhhhCceEEEEecCC-----CHHHH
Confidence               1237999999866 5789999999999999998875321     1111111 223445555544432     25567


Q ss_pred             HHHHHHHHCCCceeeeeeeecCCcHHHHHHHHhcCCccceEEE
Q 028523          161 EMMIPRIKEGKIVYVEDKAEGLESAPAALVGLFSGRNVGKQVV  203 (208)
Q Consensus       161 ~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv  203 (208)
                      ..+++++.++.+++. .++++++++.+|++.+.++...||+|+
T Consensus       288 ~~~~~l~~~~~l~~~-~~~~~~~~~~~a~~~~~~~~~~~~~v~  329 (329)
T cd08298         288 EEFLKLAAEIPIKPE-VETYPLEEANEALQDLKEGRIRGAAVL  329 (329)
T ss_pred             HHHHHHHHcCCCCce-EEEEeHHHHHHHHHHHHcCCCcceeeC
Confidence            889999999998874 578999999999999999988899874

These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short cha

>cd08267 MDR1 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=99.83  E-value=1.5e-18  Score=133.55  Aligned_cols=188  Identities=30%  Similarity=0.354  Sum_probs=137.8

Q ss_pred             chhhHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHHH
Q 028523            2 PGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAAL   81 (208)
Q Consensus         2 ~~~tA~~~l~~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~~   81 (208)
                      ++.+||+++.+...+.+|++++|+|++|++|++++++++..|++|++++++ ++.+.++ ++|.+.++++... ++.   
T Consensus       127 ~~~~a~~~~~~~~~~~~g~~vli~g~~g~~g~~~~~la~~~g~~v~~~~~~-~~~~~~~-~~g~~~~~~~~~~-~~~---  200 (319)
T cd08267         127 AGLTALQALRDAGKVKPGQRVLINGASGGVGTFAVQIAKALGAHVTGVCST-RNAELVR-SLGADEVIDYTTE-DFV---  200 (319)
T ss_pred             HHHHHHHHHHHhcCCCCCCEEEEEcCCcHHHHHHHHHHHHcCCEEEEEeCH-HHHHHHH-HcCCCEeecCCCC-Ccc---
Confidence            467899999888889999999999999999999999999999999999855 7888887 8999888877654 433   


Q ss_pred             HhHCCC-CccEEEeCCCch--hHHHHHHhhccCCEEEEEecccccCCCCCCCccc--hHHHhhcceeEEEeeccccccch
Q 028523           82 KRYFPE-GINIYFENVGGK--MLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHN--LTCLISKRIRMEGFLVPDYFHLY  156 (208)
Q Consensus        82 ~~~~~~-~~d~v~d~~g~~--~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~  156 (208)
                      ...+.+ ++|++++|+++.  .....+..++++|+++.+|......    .....  ..........+......  +.  
T Consensus       201 ~~~~~~~~~d~vi~~~~~~~~~~~~~~~~l~~~g~~i~~g~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~--~~--  272 (319)
T cd08267         201 ALTAGGEKYDVIFDAVGNSPFSLYRASLALKPGGRYVSVGGGPSGL----LLVLLLLPLTLGGGGRRLKFFLAK--PN--  272 (319)
T ss_pred             hhccCCCCCcEEEECCCchHHHHHHhhhccCCCCEEEEeccccccc----cccccccchhhccccceEEEEEec--CC--
Confidence            333344 899999999853  3333444499999999998754211    00000  01111111222222111  11  


Q ss_pred             HHHHHHHHHHHHCCCceeeeeeeecCCcHHHHHHHHhcCCccceEEE
Q 028523          157 PKFLEMMIPRIKEGKIVYVEDKAEGLESAPAALVGLFSGRNVGKQVV  203 (208)
Q Consensus       157 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv  203 (208)
                      .+.+.++++++.++.+.+.+.++++++++.++++.+.++...+|+++
T Consensus       273 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~~a~~~~~~~~~~~~vvv  319 (319)
T cd08267         273 AEDLEQLAELVEEGKLKPVIDSVYPLEDAPEAYRRLKSGRARGKVVI  319 (319)
T ss_pred             HHHHHHHHHHHHCCCeeeeeeeEEcHHHHHHHHHHHhcCCCCCcEeC
Confidence            66788899999999998888889999999999999998887788874

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd08255 2-desacetyl-2-hydroxyethyl_bacteriochlorophyllide_like 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide and other MDR family members

Probab=99.82  E-value=1.4e-18  Score=131.45  Aligned_cols=185  Identities=25%  Similarity=0.265  Sum_probs=139.7

Q ss_pred             chhhHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCE-EEEEeCCHHHHHHHHHhcC-CCeeEecCCCccHHH
Q 028523            2 PGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCY-VVGSAGSKDKVDLLKNKFG-FDEAFNYKEEPDLDA   79 (208)
Q Consensus         2 ~~~tA~~~l~~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g~~-v~~~~~s~~~~~~~~~~~g-~~~v~~~~~~~~~~~   79 (208)
                      +++|||+++. .+++++|++++|+| .|++|++++|+|+.+|++ |+++++++++.+.++ ++| .+.++++.+.     
T Consensus        82 ~~~ta~~~~~-~~~~~~g~~vlI~g-~g~vg~~~i~~a~~~g~~~vi~~~~~~~~~~~~~-~~g~~~~~~~~~~~-----  153 (277)
T cd08255          82 LAATALNGVR-DAEPRLGERVAVVG-LGLVGLLAAQLAKAAGAREVVGVDPDAARRELAE-ALGPADPVAADTAD-----  153 (277)
T ss_pred             HHHHHHHHHH-hcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCcEEEECCCHHHHHHHH-HcCCCccccccchh-----
Confidence            4678999984 68999999999997 599999999999999998 999999999999888 888 4445443221     


Q ss_pred             HHHhHCCCCccEEEeCCC-chhHHHHHHhhccCCEEEEEecccccCCCCCCCccchHHHhhcceeEEEeeccccc-----
Q 028523           80 ALKRYFPEGINIYFENVG-GKMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCLISKRIRMEGFLVPDYF-----  153 (208)
Q Consensus        80 ~~~~~~~~~~d~v~d~~g-~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----  153 (208)
                         ...+.++|.+||+++ +......+++++++|+++.+|.....      .......+..+.+++.+.......     
T Consensus       154 ---~~~~~~~d~vl~~~~~~~~~~~~~~~l~~~g~~~~~g~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  224 (277)
T cd08255         154 ---EIGGRGADVVIEASGSPSALETALRLLRDRGRVVLVGWYGLK------PLLLGEEFHFKRLPIRSSQVYGIGRYDRP  224 (277)
T ss_pred             ---hhcCCCCCEEEEccCChHHHHHHHHHhcCCcEEEEEeccCCC------ccccHHHHHhccCeEEeeccccccccccc
Confidence               112237999999988 57888999999999999999876531      111122333455576666554320     


Q ss_pred             --cchHHHHHHHHHHHHCCCceeeeeeeecCCcHHHHHHHHhcCC-ccceEEE
Q 028523          154 --HLYPKFLEMMIPRIKEGKIVYVEDKAEGLESAPAALVGLFSGR-NVGKQVV  203 (208)
Q Consensus       154 --~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~-~~gk~vv  203 (208)
                        ....+.+.++++++.++.+++.+.+.++++++.++++.+.++. ...|+++
T Consensus       225 ~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~a~~~~~~~~~~~~k~~~  277 (277)
T cd08255         225 RRWTEARNLEEALDLLAEGRLEALITHRVPFEDAPEAYRLLFEDPPECLKVVL  277 (277)
T ss_pred             ccccccccHHHHHHHHHcCCccccccCccCHHHHHHHHHHHHcCCccceeeeC
Confidence              1223578889999999999888778899999999999998873 4457653

This subgroup of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family has members identified as 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase and alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MD

>cd08258 Zn_ADH4 Alcohol dehydrogenases of the MDR family

Probab=99.80  E-value=1.3e-17  Score=127.88  Aligned_cols=155  Identities=26%  Similarity=0.347  Sum_probs=126.6

Q ss_pred             chhhHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEe--CCHHHHHHHHHhcCCCeeEecCCCccHHH
Q 028523            2 PGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSA--GSKDKVDLLKNKFGFDEAFNYKEEPDLDA   79 (208)
Q Consensus         2 ~~~tA~~~l~~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~--~s~~~~~~~~~~~g~~~v~~~~~~~~~~~   79 (208)
                      +++|||+++...++++++++|+|.| +|++|++++|+|+..|++|++++  +++++.+.++ ++|++.+ ++.+. ++..
T Consensus       148 ~~~~a~~~l~~~~~~~~g~~vlI~g-~g~~g~~~~~la~~~G~~v~~~~~~~~~~~~~~~~-~~g~~~~-~~~~~-~~~~  223 (306)
T cd08258         148 PLAVAVHAVAERSGIRPGDTVVVFG-PGPIGLLAAQVAKLQGATVVVVGTEKDEVRLDVAK-ELGADAV-NGGEE-DLAE  223 (306)
T ss_pred             hHHHHHHHHHHhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCEEEEECCCCCHHHHHHHH-HhCCccc-CCCcC-CHHH
Confidence            4678999998889999999999976 69999999999999999988773  3444667777 8999878 77766 7888


Q ss_pred             HHHhHCCC-CccEEEeCCC-chhHHHHHHhhccCCEEEEEecccccCCCCCCCccchHHHhhcceeEEEeeccccccchH
Q 028523           80 ALKRYFPE-GINIYFENVG-GKMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCLISKRIRMEGFLVPDYFHLYP  157 (208)
Q Consensus        80 ~~~~~~~~-~~d~v~d~~g-~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  157 (208)
                      .+....++ ++|+++|+.| +..+...+++|+++|+++.+|...+     ....++...++.+++++.|+++.+     .
T Consensus       224 ~l~~~~~~~~vd~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-----~~~~~~~~~~~~~~~~i~g~~~~~-----~  293 (306)
T cd08258         224 LVNEITDGDGADVVIECSGAVPALEQALELLRKGGRIVQVGIFGP-----LAASIDVERIIQKELSVIGSRSST-----P  293 (306)
T ss_pred             HHHHHcCCCCCCEEEECCCChHHHHHHHHHhhcCCEEEEEcccCC-----CCcccCHHHHhhcCcEEEEEecCc-----h
Confidence            88777765 8999999997 4788899999999999999988652     123345566778999999999866     5


Q ss_pred             HHHHHHHHHHHCC
Q 028523          158 KFLEMMIPRIKEG  170 (208)
Q Consensus       158 ~~~~~~~~~~~~g  170 (208)
                      +.++++++++++|
T Consensus       294 ~~~~~~~~~~~~~  306 (306)
T cd08258         294 ASWETALRLLASG  306 (306)
T ss_pred             HhHHHHHHHHhcC
Confidence            6688888888765

This group shares the zinc coordination sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous

>cd05188 MDR Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=99.76  E-value=1.1e-16  Score=120.27  Aligned_cols=141  Identities=33%  Similarity=0.471  Sum_probs=116.2

Q ss_pred             chhhHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHHH
Q 028523            2 PGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAAL   81 (208)
Q Consensus         2 ~~~tA~~~l~~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~~   81 (208)
                      ++.|||+++.....+.++++|+|+|+++ +|++++|+++..|.+|+++++++++.+.++ ++|.+.++++.+. +....+
T Consensus       118 ~~~~a~~~l~~~~~~~~~~~vli~g~~~-~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~g~~~~~~~~~~-~~~~~~  194 (271)
T cd05188         118 PLATAYHALRRAGVLKPGDTVLVLGAGG-VGLLAAQLAKAAGARVIVTDRSDEKLELAK-ELGADHVIDYKEE-DLEEEL  194 (271)
T ss_pred             HHHHHHHHHHhccCCCCCCEEEEECCCH-HHHHHHHHHHHcCCeEEEEcCCHHHHHHHH-HhCCceeccCCcC-CHHHHH
Confidence            5789999998888779999999999866 999999999999999999999999999998 8898888887766 666655


Q ss_pred             HhHCCC-CccEEEeCCCc-hhHHHHHHhhccCCEEEEEecccccCCCCCCCccchHHHhhcceeEEEeeccc
Q 028523           82 KRYFPE-GINIYFENVGG-KMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCLISKRIRMEGFLVPD  151 (208)
Q Consensus        82 ~~~~~~-~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  151 (208)
                      . ...+ ++|++++++++ ......+++++++|+++.++.....     .........+.+++++.++....
T Consensus       195 ~-~~~~~~~d~vi~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~  260 (271)
T cd05188         195 R-LTGGGGADVVIDAVGGPETLAQALRLLRPGGRIVVVGGTSGG-----PPLDDLRRLLFKELTIIGSTGGT  260 (271)
T ss_pred             H-HhcCCCCCEEEECCCCHHHHHHHHHhcccCCEEEEEccCCCC-----CCcccHHHHHhcceEEEEeecCC
Confidence            5 4444 89999999998 8889999999999999999876532     11122455678899998887654

The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydro

>PF13602 ADH_zinc_N_2: Zinc-binding dehydrogenase; PDB: 3TQH_A 2VN8_A 3GOH_A 4A27_A

Probab=99.75  E-value=2.6e-18  Score=115.08  Aligned_cols=122  Identities=28%  Similarity=0.313  Sum_probs=81.6

Q ss_pred             cCCCeeEecCCCccHHHHHHhHCCCCccEEEeCCC--chhH-HHHHHhhccCCEEEEEecccccCCCCCCCccchHHHhh
Q 028523           63 FGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVG--GKML-DAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCLIS  139 (208)
Q Consensus        63 ~g~~~v~~~~~~~~~~~~~~~~~~~~~d~v~d~~g--~~~~-~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~  139 (208)
                      ||+++++||++. ++      ...+++|+|||++|  ++.+ ..++++| ++|+++.++..           ........
T Consensus         1 LGAd~vidy~~~-~~------~~~~~~D~ViD~~g~~~~~~~~~~~~~l-~~G~~v~i~~~-----------~~~~~~~~   61 (127)
T PF13602_consen    1 LGADEVIDYRDT-DF------AGPGGVDVVIDTVGQTGESLLDASRKLL-PGGRVVSIGGD-----------LPSFARRL   61 (127)
T ss_dssp             CT-SEEEETTCS-HH------HTTS-EEEEEESS-CCHHHCGGGCCCTE-EEEEEEEE-SH-----------HHHHHHHH
T ss_pred             CCcCEEecCCCc-cc------cCCCCceEEEECCCCccHHHHHHHHHHC-CCCEEEEECCc-----------ccchhhhh
Confidence            689999999965 55      23448999999999  6544 7777888 99999998741           01111212


Q ss_pred             cceeEEEeecccc-c-cchHHHHHHHHHHHHCCCceeeeeeeecCCcHHHHHHHHhcCCccceEEE
Q 028523          140 KRIRMEGFLVPDY-F-HLYPKFLEMMIPRIKEGKIVYVEDKAEGLESAPAALVGLFSGRNVGKQVV  203 (208)
Q Consensus       140 ~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv  203 (208)
                      ....+........ + ....+.++++.+++++|+++|.+.++||++++.+|++.+++++..||+||
T Consensus        62 ~~~~~~~~~~~~~~~~~~~~~~l~~l~~l~~~G~l~~~i~~~f~l~~~~~A~~~l~~~~~~GKvVl  127 (127)
T PF13602_consen   62 KGRSIRYSFLFSVDPNAIRAEALEELAELVAEGKLKPPIDRVFPLEEAPEAHERLESGHARGKVVL  127 (127)
T ss_dssp             HCHHCEEECCC-H--HHHHHHHHHHHHHHHHTTSS---EEEEEEGGGHHHHHHHHHCT--SSEEEE
T ss_pred             cccceEEEEEEecCCCchHHHHHHHHHHHHHCCCeEEeeccEECHHHHHHHHHHHHhCCCCCeEeC
Confidence            2222332232211 1 12356799999999999999999999999999999999999999999997

>cd00401 AdoHcyase S-adenosyl-L-homocysteine hydrolase (AdoHycase) catalyzes the hydrolysis of S-adenosyl-L-homocysteine (AdoHyc) to form adenosine (Ado) and homocysteine (Hcy)

Probab=99.60  E-value=4.5e-14  Score=110.77  Aligned_cols=176  Identities=13%  Similarity=0.077  Sum_probs=129.2

Q ss_pred             hHHHHHHHhcC-CCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHHHHh
Q 028523            5 TAYAGFFEVCS-PKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKR   83 (208)
Q Consensus         5 tA~~~l~~~~~-~~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~   83 (208)
                      +.|.++.+..+ ..+|++|+|.|+ |++|+.+++.++.+|++|++++.++.+.+.++ .+|++.+       ...+.++ 
T Consensus       187 s~~~~i~r~t~~~l~GktVvViG~-G~IG~~va~~ak~~Ga~ViV~d~d~~R~~~A~-~~G~~~~-------~~~e~v~-  256 (413)
T cd00401         187 SLIDGIKRATDVMIAGKVAVVAGY-GDVGKGCAQSLRGQGARVIVTEVDPICALQAA-MEGYEVM-------TMEEAVK-  256 (413)
T ss_pred             hhHHHHHHhcCCCCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEECChhhHHHHH-hcCCEEc-------cHHHHHc-
Confidence            34555555443 368999999995 99999999999999999999999999999888 8888432       1222221 


Q ss_pred             HCCCCccEEEeCCCc-hhHHHH-HHhhccCCEEEEEecccccCCCCCCCccchHHHhhcceeEEEeeccccccchHHHHH
Q 028523           84 YFPEGINIYFENVGG-KMLDAV-LLNMRIQGRITLCGMISQYNNDKPEGVHNLTCLISKRIRMEGFLVPDYFHLYPKFLE  161 (208)
Q Consensus        84 ~~~~~~d~v~d~~g~-~~~~~~-~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  161 (208)
                          ++|+||+|+|. ..+... ++.++++|.++.+|..        ...++...+..+++++.++.....    .-.++
T Consensus       257 ----~aDVVI~atG~~~~i~~~~l~~mk~GgilvnvG~~--------~~eId~~~L~~~el~i~g~~~~~~----~~~~~  320 (413)
T cd00401         257 ----EGDIFVTTTGNKDIITGEHFEQMKDGAIVCNIGHF--------DVEIDVKGLKENAVEVVNIKPQVD----RYELP  320 (413)
T ss_pred             ----CCCEEEECCCCHHHHHHHHHhcCCCCcEEEEeCCC--------CCccCHHHHHhhccEEEEccCCcc----eEEcC
Confidence                48999999995 456665 9999999999999853        123566667778888877665321    00233


Q ss_pred             --HHHHHHHCCCc---eeeeeee-----ecCC-cHHHHHHHHhcCCc-cceEEEEec
Q 028523          162 --MMIPRIKEGKI---VYVEDKA-----EGLE-SAPAALVGLFSGRN-VGKQVVEVA  206 (208)
Q Consensus       162 --~~~~~~~~g~~---~~~~~~~-----~~~~-~~~~a~~~~~~~~~-~gk~vv~~~  206 (208)
                        +.+.++.+|.+   .+.+++.     ++|+ ++.++++.+.++.. .-|+++.++
T Consensus       321 ~g~aI~LLa~Grlvnl~~~~gH~~~vmd~sf~~q~l~a~~l~~~~~~~~~kV~~~p~  377 (413)
T cd00401         321 DGRRIILLAEGRLVNLGCATGHPSFVMSNSFTNQVLAQIELWTNRDKYEVGVYFLPK  377 (413)
T ss_pred             CcchhhhhhCcCCCCCcccCCCccceechhHHHHHHHHHHHHhcCCcCCCcEEECCH
Confidence              68899999988   3445555     7888 99999999988764 357776553

The equilibrium lies far on the side of AdoHyc synthesis, but in nature the removal of Ado and Hyc is sufficiently fast, so that the net reaction is in the direction of hydrolysis. Since AdoHyc is a potent inhibitor of S-adenosyl-L-methionine dependent methyltransferases, AdoHycase plays a critical role in the modulation of the activity of various methyltransferases. The enzyme forms homooligomers of 45-50kDa subunits, each binding one molecule of NAD+.

>PRK09424 pntA NAD(P) transhydrogenase subunit alpha; Provisional

Probab=99.56  E-value=2.5e-13  Score=109.16  Aligned_cols=149  Identities=11%  Similarity=0.069  Sum_probs=107.2

Q ss_pred             CCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCe-eEecCCCc------------cHHHHHH
Q 028523           16 PKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDE-AFNYKEEP------------DLDAALK   82 (208)
Q Consensus        16 ~~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~-v~~~~~~~------------~~~~~~~   82 (208)
                      ..++++|+|+|+ |++|+++++.|+.+|++|++++.++++.+.++ ++|++. .++..+..            ++.+..+
T Consensus       162 ~~pg~kVlViGa-G~iGL~Ai~~Ak~lGA~V~a~D~~~~rle~ae-slGA~~v~i~~~e~~~~~~gya~~~s~~~~~~~~  239 (509)
T PRK09424        162 KVPPAKVLVIGA-GVAGLAAIGAAGSLGAIVRAFDTRPEVAEQVE-SMGAEFLELDFEEEGGSGDGYAKVMSEEFIKAEM  239 (509)
T ss_pred             CcCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HcCCeEEEeccccccccccchhhhcchhHHHHHH
Confidence            457999999996 99999999999999999999999999999999 899984 35553310            2222222


Q ss_pred             hH-CC--CCccEEEeCCCch------h-HHHHHHhhccCCEEEEEecccccCCCCCCCccchHHHhh-cceeEEEeeccc
Q 028523           83 RY-FP--EGINIYFENVGGK------M-LDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCLIS-KRIRMEGFLVPD  151 (208)
Q Consensus        83 ~~-~~--~~~d~v~d~~g~~------~-~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~  151 (208)
                      +. .+  +++|++|+|++.+      . .+.+++.+++||+++.++...+.+.+   ...+....+. +++++.|...  
T Consensus       240 ~~~~~~~~gaDVVIetag~pg~~aP~lit~~~v~~mkpGgvIVdvg~~~GG~~e---~t~~~~~v~~~~gVti~Gv~n--  314 (509)
T PRK09424        240 ALFAEQAKEVDIIITTALIPGKPAPKLITAEMVASMKPGSVIVDLAAENGGNCE---LTVPGEVVVTDNGVTIIGYTD--  314 (509)
T ss_pred             HHHHhccCCCCEEEECCCCCcccCcchHHHHHHHhcCCCCEEEEEccCCCCCcc---cccCccceEeECCEEEEEeCC--
Confidence            22 33  2699999999842      3 48999999999999999986432211   1222334454 7888888663  


Q ss_pred             cccchHHHHHHHHHHHHCCCcee
Q 028523          152 YFHLYPKFLEMMIPRIKEGKIVY  174 (208)
Q Consensus       152 ~~~~~~~~~~~~~~~~~~g~~~~  174 (208)
                      ++   .++..+..+++.++.+..
T Consensus       315 ~P---~~~p~~As~lla~~~i~l  334 (509)
T PRK09424        315 LP---SRLPTQSSQLYGTNLVNL  334 (509)
T ss_pred             Cc---hhHHHHHHHHHHhCCccH
Confidence            22   344556888888887754

>TIGR00561 pntA NAD(P) transhydrogenase, alpha subunit

Probab=98.96  E-value=1.1e-08  Score=82.63  Aligned_cols=107  Identities=19%  Similarity=0.208  Sum_probs=81.0

Q ss_pred             CCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCe-eEecCCC------------ccHHHHHHh
Q 028523           17 KQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDE-AFNYKEE------------PDLDAALKR   83 (208)
Q Consensus        17 ~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~-v~~~~~~------------~~~~~~~~~   83 (208)
                      .++++++|+|+ |.+|+++++.++.+|++|++.++++++++.++ ++|++. .++..+.            +++.+...+
T Consensus       162 vp~akVlViGa-G~iGl~Aa~~ak~lGA~V~v~d~~~~rle~a~-~lGa~~v~v~~~e~g~~~~gYa~~~s~~~~~~~~~  239 (511)
T TIGR00561       162 VPPAKVLVIGA-GVAGLAAIGAANSLGAIVRAFDTRPEVKEQVQ-SMGAEFLELDFKEEGGSGDGYAKVMSEEFIAAEME  239 (511)
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HcCCeEEeccccccccccccceeecCHHHHHHHHH
Confidence            35789999996 99999999999999999999999999999999 899865 3332210            022222222


Q ss_pred             HCC---CCccEEEeCC---Cc--h--hHHHHHHhhccCCEEEEEecccccCC
Q 028523           84 YFP---EGINIYFENV---GG--K--MLDAVLLNMRIQGRITLCGMISQYNN  125 (208)
Q Consensus        84 ~~~---~~~d~v~d~~---g~--~--~~~~~~~~l~~~G~~v~~g~~~~~~~  125 (208)
                      ...   .++|++|+|+   |.  +  ..+++.+.|++|+.++.++...+.+.
T Consensus       240 ~~~e~~~~~DIVI~TalipG~~aP~Lit~emv~~MKpGsvIVDlA~d~GGn~  291 (511)
T TIGR00561       240 LFAAQAKEVDIIITTALIPGKPAPKLITEEMVDSMKAGSVIVDLAAEQGGNC  291 (511)
T ss_pred             HHHHHhCCCCEEEECcccCCCCCCeeehHHHHhhCCCCCEEEEeeeCCCCCE
Confidence            222   2699999999   53  2  46788999999999999998776543

In some species, such as Rhodospirillum rubrum, the alpha chain is replaced by two shorter chains, both with some homology to the full-length alpha chain modeled here. These score below the trusted cutoff.

>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]

Probab=98.84  E-value=2.6e-08  Score=72.09  Aligned_cols=80  Identities=23%  Similarity=0.404  Sum_probs=65.3

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCC----CeeEecCCCccHHHHHHhHCCC--CccE
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGF----DEAFNYKEEPDLDAALKRYFPE--GINI   91 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~----~~v~~~~~~~~~~~~~~~~~~~--~~d~   91 (208)
                      +++.++|+|||+|+|.+.++.....|++|+.+.|+.++++.+..+++.    ...+|.++.....+.+......  .+|+
T Consensus         5 ~~kv~lITGASSGiG~A~A~~l~~~G~~vvl~aRR~drL~~la~~~~~~~~~~~~~DVtD~~~~~~~i~~~~~~~g~iDi   84 (246)
T COG4221           5 KGKVALITGASSGIGEATARALAEAGAKVVLAARREERLEALADEIGAGAALALALDVTDRAAVEAAIEALPEEFGRIDI   84 (246)
T ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEeccHHHHHHHHHhhccCceEEEeeccCCHHHHHHHHHHHHHhhCcccE
Confidence            457899999999999999999999999999999999999999889983    2356777653444555554444  6999


Q ss_pred             EEeCCC
Q 028523           92 YFENVG   97 (208)
Q Consensus        92 v~d~~g   97 (208)
                      .++..|
T Consensus        85 LvNNAG   90 (246)
T COG4221          85 LVNNAG   90 (246)
T ss_pred             EEecCC
Confidence            999987

>PRK11873 arsM arsenite S-adenosylmethyltransferase; Reviewed

Probab=98.77  E-value=1.7e-07  Score=70.91  Aligned_cols=171  Identities=16%  Similarity=0.219  Sum_probs=100.3

Q ss_pred             hcCCCCCCEEEEecCCchHHHHHHHHHHHcCC--EEEEEeCCHHHHHHHHHh---cCCCeeEecCCCccHHHHHHhHCCC
Q 028523           13 VCSPKQGEYVFVSAASGAVGQLVGQFAKLVGC--YVVGSAGSKDKVDLLKNK---FGFDEAFNYKEEPDLDAALKRYFPE   87 (208)
Q Consensus        13 ~~~~~~g~~vli~ga~g~vG~~a~qla~~~g~--~v~~~~~s~~~~~~~~~~---~g~~~v~~~~~~~~~~~~~~~~~~~   87 (208)
                      .+.+++|++||.+|+ |+ |..+.++++..|.  +|++++.+++..+.+++.   +|...+ ..... ++.+ + ...++
T Consensus        72 ~~~~~~g~~VLDiG~-G~-G~~~~~~a~~~g~~~~v~gvD~s~~~l~~A~~~~~~~g~~~v-~~~~~-d~~~-l-~~~~~  145 (272)
T PRK11873         72 LAELKPGETVLDLGS-GG-GFDCFLAARRVGPTGKVIGVDMTPEMLAKARANARKAGYTNV-EFRLG-EIEA-L-PVADN  145 (272)
T ss_pred             hccCCCCCEEEEeCC-CC-CHHHHHHHHHhCCCCEEEEECCCHHHHHHHHHHHHHcCCCCE-EEEEc-chhh-C-CCCCC
Confidence            356789999999984 55 8888888888765  799999999988887732   343322 11111 2211 1 12233


Q ss_pred             CccEEEeCC------C-chhHHHHHHhhccCCEEEEEecccccCCCCCCCccchHHHhhcceeEEEeeccccccchHHHH
Q 028523           88 GINIYFENV------G-GKMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCLISKRIRMEGFLVPDYFHLYPKFL  160 (208)
Q Consensus        88 ~~d~v~d~~------g-~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (208)
                      .||+|+...      + ...+..+++.|+|||+++..+.....     .  .+  ..+.+...+.+.......     ..
T Consensus       146 ~fD~Vi~~~v~~~~~d~~~~l~~~~r~LkpGG~l~i~~~~~~~-----~--~~--~~~~~~~~~~~~~~~~~~-----~~  211 (272)
T PRK11873        146 SVDVIISNCVINLSPDKERVFKEAFRVLKPGGRFAISDVVLRG-----E--LP--EEIRNDAELYAGCVAGAL-----QE  211 (272)
T ss_pred             ceeEEEEcCcccCCCCHHHHHHHHHHHcCCCcEEEEEEeeccC-----C--CC--HHHHHhHHHHhccccCCC-----CH
Confidence            799998543      2 24789999999999999987664321     1  11  111122211111111111     12


Q ss_pred             HHHHHHHHCCCce---eeeeeeecCCcHHHHHHHH--hcCCccceEEE
Q 028523          161 EMMIPRIKEGKIV---YVEDKAEGLESAPAALVGL--FSGRNVGKQVV  203 (208)
Q Consensus       161 ~~~~~~~~~g~~~---~~~~~~~~~~~~~~a~~~~--~~~~~~gk~vv  203 (208)
                      .++.+++.+..+.   ......++++++.++++.+  ..+...++.+.
T Consensus       212 ~e~~~~l~~aGf~~v~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~  259 (272)
T PRK11873        212 EEYLAMLAEAGFVDITIQPKREYRIPDAREFLEDWGIAPGRQLDGYIV  259 (272)
T ss_pred             HHHHHHHHHCCCCceEEEeccceecccHHHHHHHhccccccccCceEE
Confidence            3344555553332   2334567899999999988  55555555554

>PRK05476 S-adenosyl-L-homocysteine hydrolase; Provisional

Probab=98.75  E-value=2.3e-07  Score=73.58  Aligned_cols=103  Identities=17%  Similarity=0.178  Sum_probs=77.8

Q ss_pred             hHHHHHHHhcCCC-CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHHHHh
Q 028523            5 TAYAGFFEVCSPK-QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKR   83 (208)
Q Consensus         5 tA~~~l~~~~~~~-~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~   83 (208)
                      .+|.++.+...+. .|++|+|.|. |.+|..+++.++.+|++|+++++++.+...+. ..|.. +.      ++.+.++ 
T Consensus       197 s~~~ai~rat~~~l~Gk~VlViG~-G~IG~~vA~~lr~~Ga~ViV~d~dp~ra~~A~-~~G~~-v~------~l~eal~-  266 (425)
T PRK05476        197 SLLDGIKRATNVLIAGKVVVVAGY-GDVGKGCAQRLRGLGARVIVTEVDPICALQAA-MDGFR-VM------TMEEAAE-  266 (425)
T ss_pred             hhHHHHHHhccCCCCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEcCCchhhHHHH-hcCCE-ec------CHHHHHh-
Confidence            3466665543544 8999999995 99999999999999999999998887766665 55653 22      2222222 


Q ss_pred             HCCCCccEEEeCCCc-hhHH-HHHHhhccCCEEEEEeccc
Q 028523           84 YFPEGINIYFENVGG-KMLD-AVLLNMRIQGRITLCGMIS  121 (208)
Q Consensus        84 ~~~~~~d~v~d~~g~-~~~~-~~~~~l~~~G~~v~~g~~~  121 (208)
                          ++|++|+++|. ..+. ..+..|++|+.++..|...
T Consensus       267 ----~aDVVI~aTG~~~vI~~~~~~~mK~GailiNvG~~d  302 (425)
T PRK05476        267 ----LGDIFVTATGNKDVITAEHMEAMKDGAILANIGHFD  302 (425)
T ss_pred             ----CCCEEEECCCCHHHHHHHHHhcCCCCCEEEEcCCCC
Confidence                58999999995 4554 6889999999999998754

>TIGR00518 alaDH alanine dehydrogenase

Probab=98.72  E-value=8.9e-07  Score=69.68  Aligned_cols=100  Identities=16%  Similarity=0.160  Sum_probs=72.5

Q ss_pred             CCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHHHHhHCCCCccEEEeCCC-
Q 028523           19 GEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVG-   97 (208)
Q Consensus        19 g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~d~v~d~~g-   97 (208)
                      +.+|+|.|+ |.+|+.+++.++.+|++|+++++++++.+.+.+.++......+.+...+.+.+    . .+|++|+|++ 
T Consensus       167 ~~~VlViGa-G~vG~~aa~~a~~lGa~V~v~d~~~~~~~~l~~~~g~~v~~~~~~~~~l~~~l----~-~aDvVI~a~~~  240 (370)
T TIGR00518       167 PGDVTIIGG-GVVGTNAAKMANGLGATVTILDINIDRLRQLDAEFGGRIHTRYSNAYEIEDAV----K-RADLLIGAVLI  240 (370)
T ss_pred             CceEEEEcC-CHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHhcCceeEeccCCHHHHHHHH----c-cCCEEEEcccc
Confidence            345889996 99999999999999999999999988888776466653222222211222222    2 4899999973 


Q ss_pred             --c--h--hHHHHHHhhccCCEEEEEecccccC
Q 028523           98 --G--K--MLDAVLLNMRIQGRITLCGMISQYN  124 (208)
Q Consensus        98 --~--~--~~~~~~~~l~~~G~~v~~g~~~~~~  124 (208)
                        .  +  .....++.+++++.++.++...+.+
T Consensus       241 ~g~~~p~lit~~~l~~mk~g~vIvDva~d~GG~  273 (370)
T TIGR00518       241 PGAKAPKLVSNSLVAQMKPGAVIVDVAIDQGGC  273 (370)
T ss_pred             CCCCCCcCcCHHHHhcCCCCCEEEEEecCCCCC
Confidence              2  2  2477888899999999999877654

The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP.

>TIGR00936 ahcY adenosylhomocysteinase

Probab=98.68  E-value=6.6e-07  Score=70.63  Aligned_cols=102  Identities=19%  Similarity=0.224  Sum_probs=75.7

Q ss_pred             HHHHHHHhcC-CCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHHHHhH
Q 028523            6 AYAGFFEVCS-PKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRY   84 (208)
Q Consensus         6 A~~~l~~~~~-~~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~   84 (208)
                      ++.++.+..+ ...|++|+|.|. |.+|+..++.++.+|++|+++..++.+...+. ..|+ .+.      ...+.++  
T Consensus       181 ~~~~i~r~t~~~l~Gk~VvViG~-G~IG~~vA~~ak~~Ga~ViV~d~dp~r~~~A~-~~G~-~v~------~leeal~--  249 (406)
T TIGR00936       181 TIDGILRATNLLIAGKTVVVAGY-GWCGKGIAMRARGMGARVIVTEVDPIRALEAA-MDGF-RVM------TMEEAAK--  249 (406)
T ss_pred             HHHHHHHhcCCCCCcCEEEEECC-CHHHHHHHHHHhhCcCEEEEEeCChhhHHHHH-hcCC-EeC------CHHHHHh--
Confidence            3444444333 368999999995 99999999999999999999988887766666 5665 222      2222222  


Q ss_pred             CCCCccEEEeCCCch-hHH-HHHHhhccCCEEEEEeccc
Q 028523           85 FPEGINIYFENVGGK-MLD-AVLLNMRIQGRITLCGMIS  121 (208)
Q Consensus        85 ~~~~~d~v~d~~g~~-~~~-~~~~~l~~~G~~v~~g~~~  121 (208)
                         +.|++|+++|.. .+. ..+..+++++.++.+|...
T Consensus       250 ---~aDVVItaTG~~~vI~~~~~~~mK~GailiN~G~~~  285 (406)
T TIGR00936       250 ---IGDIFITATGNKDVIRGEHFENMKDGAIVANIGHFD  285 (406)
T ss_pred             ---cCCEEEECCCCHHHHHHHHHhcCCCCcEEEEECCCC
Confidence               479999999964 455 4888999999999988753

This enzyme hydrolyzes adenosylhomocysteine as part of a cycle for the regeneration of the methyl donor S-adenosylmethionine. Species that lack this enzyme are likely to have adenosylhomocysteine nucleosidase (EC 3.2.2.9), an enzyme which also acts as 5'-methyladenosine nucleosidase (see TIGR01704).

>PLN02494 adenosylhomocysteinase

Probab=98.67  E-value=5.9e-07  Score=71.65  Aligned_cols=101  Identities=15%  Similarity=0.202  Sum_probs=77.3

Q ss_pred             HHHHHHHhcCC-CCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHHHHhH
Q 028523            6 AYAGFFEVCSP-KQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRY   84 (208)
Q Consensus         6 A~~~l~~~~~~-~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~   84 (208)
                      .+.++.+..++ -.|++++|.|. |.+|...++.++.+|++|+++.+++.+...+. ..|.. ++      .+.+.++  
T Consensus       240 ~~d~i~r~t~i~LaGKtVvViGy-G~IGr~vA~~aka~Ga~VIV~e~dp~r~~eA~-~~G~~-vv------~leEal~--  308 (477)
T PLN02494        240 LPDGLMRATDVMIAGKVAVICGY-GDVGKGCAAAMKAAGARVIVTEIDPICALQAL-MEGYQ-VL------TLEDVVS--  308 (477)
T ss_pred             HHHHHHHhcCCccCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCchhhHHHH-hcCCe-ec------cHHHHHh--
Confidence            35555555444 67999999995 99999999999999999999998887766665 56653 21      2333332  


Q ss_pred             CCCCccEEEeCCCch-h-HHHHHHhhccCCEEEEEecc
Q 028523           85 FPEGINIYFENVGGK-M-LDAVLLNMRIQGRITLCGMI  120 (208)
Q Consensus        85 ~~~~~d~v~d~~g~~-~-~~~~~~~l~~~G~~v~~g~~  120 (208)
                         ..|+++++.|.. . ....+..|++++.++.+|..
T Consensus       309 ---~ADVVI~tTGt~~vI~~e~L~~MK~GAiLiNvGr~  343 (477)
T PLN02494        309 ---EADIFVTTTGNKDIIMVDHMRKMKNNAIVCNIGHF  343 (477)
T ss_pred             ---hCCEEEECCCCccchHHHHHhcCCCCCEEEEcCCC
Confidence               379999999964 3 48899999999999999874

>COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]

Probab=98.58  E-value=4.4e-07  Score=63.93  Aligned_cols=79  Identities=16%  Similarity=0.304  Sum_probs=59.5

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCC--CeeEecCCCcc---HHHHHHhHCCCCccEE
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGF--DEAFNYKEEPD---LDAALKRYFPEGINIY   92 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~--~~v~~~~~~~~---~~~~~~~~~~~~~d~v   92 (208)
                      -|.+|||+||++|+|+..++-...+|=+||++.|++++++.++++...  ..+.|..+.+.   +.+++++..+ ..+++
T Consensus         4 tgnTiLITGG~sGIGl~lak~f~elgN~VIi~gR~e~~L~e~~~~~p~~~t~v~Dv~d~~~~~~lvewLkk~~P-~lNvl   82 (245)
T COG3967           4 TGNTILITGGASGIGLALAKRFLELGNTVIICGRNEERLAEAKAENPEIHTEVCDVADRDSRRELVEWLKKEYP-NLNVL   82 (245)
T ss_pred             cCcEEEEeCCcchhhHHHHHHHHHhCCEEEEecCcHHHHHHHHhcCcchheeeecccchhhHHHHHHHHHhhCC-chhee
Confidence            478999999999999999999999999999999999999999844332  24666655422   4444443333 47888


Q ss_pred             EeCCC
Q 028523           93 FENVG   97 (208)
Q Consensus        93 ~d~~g   97 (208)
                      +++.|
T Consensus        83 iNNAG   87 (245)
T COG3967          83 INNAG   87 (245)
T ss_pred             eeccc
Confidence            88876

>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=98.56  E-value=1.1e-06  Score=64.97  Aligned_cols=104  Identities=19%  Similarity=0.208  Sum_probs=70.5

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcC---CCee--EecCCCccHHHHHHhHC--CCCcc
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFG---FDEA--FNYKEEPDLDAALKRYF--PEGIN   90 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g---~~~v--~~~~~~~~~~~~~~~~~--~~~~d   90 (208)
                      .+++++|+||+|++|..+++.+...|++|+.+++++++.+.+.+++.   ....  .|..+.+...+.+.+..  -+++|
T Consensus         4 ~~~~vlItGa~g~iG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id   83 (238)
T PRK05786          4 KGKKVAIIGVSEGLGYAVAYFALKEGAQVCINSRNENKLKRMKKTLSKYGNIHYVVGDVSSTESARNVIEKAAKVLNAID   83 (238)
T ss_pred             CCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEECCCCCHHHHHHHHHHHHHHhCCCC
Confidence            46899999999999999999999999999999999887766632332   2122  23333312333333221  13689


Q ss_pred             EEEeCCCch------------------------hHHHHHHhhccCCEEEEEeccc
Q 028523           91 IYFENVGGK------------------------MLDAVLLNMRIQGRITLCGMIS  121 (208)
Q Consensus        91 ~v~d~~g~~------------------------~~~~~~~~l~~~G~~v~~g~~~  121 (208)
                      .++.+.+..                        .++..++.++++|+++.++...
T Consensus        84 ~ii~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~ss~~  138 (238)
T PRK05786         84 GLVVTVGGYVEDTVEEFSGLEEMLTNHIKIPLYAVNASLRFLKEGSSIVLVSSMS  138 (238)
T ss_pred             EEEEcCCCcCCCchHHHHHHHHHHHHhchHHHHHHHHHHHHHhcCCEEEEEecch
Confidence            999888731                        1344556677789999988754

>PRK08306 dipicolinate synthase subunit A; Reviewed

Probab=98.56  E-value=3.8e-06  Score=64.14  Aligned_cols=94  Identities=19%  Similarity=0.263  Sum_probs=73.5

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHHHHhHCCCCccEEEeCCC
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVG   97 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~d~v~d~~g   97 (208)
                      .+.+++|+|. |.+|+.+++.++.+|++|+++++++++.+.++ .+|...+ .+.   ++.+.+.     ++|+||+|++
T Consensus       151 ~g~kvlViG~-G~iG~~~a~~L~~~Ga~V~v~~r~~~~~~~~~-~~G~~~~-~~~---~l~~~l~-----~aDiVI~t~p  219 (296)
T PRK08306        151 HGSNVLVLGF-GRTGMTLARTLKALGANVTVGARKSAHLARIT-EMGLSPF-HLS---ELAEEVG-----KIDIIFNTIP  219 (296)
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-HcCCeee-cHH---HHHHHhC-----CCCEEEECCC
Confidence            6899999995 99999999999999999999999988888887 7886432 111   2222222     4899999988


Q ss_pred             ch-hHHHHHHhhccCCEEEEEecccc
Q 028523           98 GK-MLDAVLLNMRIQGRITLCGMISQ  122 (208)
Q Consensus        98 ~~-~~~~~~~~l~~~G~~v~~g~~~~  122 (208)
                      .. .....++.+++++.++.++..++
T Consensus       220 ~~~i~~~~l~~~~~g~vIIDla~~pg  245 (296)
T PRK08306        220 ALVLTKEVLSKMPPEALIIDLASKPG  245 (296)
T ss_pred             hhhhhHHHHHcCCCCcEEEEEccCCC
Confidence            54 34677788999999999987654

>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]

Probab=98.56  E-value=5.8e-07  Score=66.73  Aligned_cols=81  Identities=19%  Similarity=0.313  Sum_probs=60.9

Q ss_pred             CCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCC----C-e--eEecCCCccHHHHHH-hHCCC
Q 028523           16 PKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGF----D-E--AFNYKEEPDLDAALK-RYFPE   87 (208)
Q Consensus        16 ~~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~----~-~--v~~~~~~~~~~~~~~-~~~~~   87 (208)
                      ...+.+++|+|||+|+|...+..+...|.+++.+.|++++++.+.+++.-    . .  .+|..+. +-.+.+. ++...
T Consensus         3 ~~~~~~~lITGASsGIG~~~A~~lA~~g~~liLvaR~~~kL~~la~~l~~~~~v~v~vi~~DLs~~-~~~~~l~~~l~~~   81 (265)
T COG0300           3 PMKGKTALITGASSGIGAELAKQLARRGYNLILVARREDKLEALAKELEDKTGVEVEVIPADLSDP-EALERLEDELKER   81 (265)
T ss_pred             CCCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHHHHHHHHhhCceEEEEECcCCCh-hHHHHHHHHHHhc
Confidence            35678999999999999999999999999999999999998887765542    1 1  3566655 3333333 22222


Q ss_pred             --CccEEEeCCC
Q 028523           88 --GINIYFENVG   97 (208)
Q Consensus        88 --~~d~v~d~~g   97 (208)
                        .+|+.+++.|
T Consensus        82 ~~~IdvLVNNAG   93 (265)
T COG0300          82 GGPIDVLVNNAG   93 (265)
T ss_pred             CCcccEEEECCC
Confidence              6999999998

>PRK08324 short chain dehydrogenase; Validated

Probab=98.51  E-value=1.4e-06  Score=74.15  Aligned_cols=105  Identities=19%  Similarity=0.260  Sum_probs=72.9

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCC--C---eeEecCCCccHHHHHHhHC--CCCcc
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGF--D---EAFNYKEEPDLDAALKRYF--PEGIN   90 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~--~---~v~~~~~~~~~~~~~~~~~--~~~~d   90 (208)
                      +|+++||+||+|++|..+++.+...|++|++++++.++.+.+.+.++.  .   ...|..+...+.+.+.+..  .+++|
T Consensus       421 ~gk~vLVTGasggIG~~la~~L~~~Ga~Vvl~~r~~~~~~~~~~~l~~~~~v~~v~~Dvtd~~~v~~~~~~~~~~~g~iD  500 (681)
T PRK08324        421 AGKVALVTGAAGGIGKATAKRLAAEGACVVLADLDEEAAEAAAAELGGPDRALGVACDVTDEAAVQAAFEEAALAFGGVD  500 (681)
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHhccCcEEEEEecCCCHHHHHHHHHHHHHHcCCCC
Confidence            578999999999999999999999999999999998887766545543  1   1234444323333333332  23799


Q ss_pred             EEEeCCCc-h-------------------------hHHHHHHhhcc---CCEEEEEecccc
Q 028523           91 IYFENVGG-K-------------------------MLDAVLLNMRI---QGRITLCGMISQ  122 (208)
Q Consensus        91 ~v~d~~g~-~-------------------------~~~~~~~~l~~---~G~~v~~g~~~~  122 (208)
                      ++|++.|. .                         .++.+++.+++   +|+++.+++...
T Consensus       501 vvI~~AG~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~~g~iV~vsS~~~  561 (681)
T PRK08324        501 IVVSNAGIAISGPIEETSDEDWRRSFDVNATGHFLVAREAVRIMKAQGLGGSIVFIASKNA  561 (681)
T ss_pred             EEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCcEEEEECCccc
Confidence            99999982 1                         13344556655   689999987543

>PRK05993 short chain dehydrogenase; Provisional

Probab=98.48  E-value=4.9e-06  Score=63.08  Aligned_cols=79  Identities=15%  Similarity=0.293  Sum_probs=58.1

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCe-eEecCCCccHHHHHHhH---CCCCccEEE
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDE-AFNYKEEPDLDAALKRY---FPEGINIYF   93 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~-v~~~~~~~~~~~~~~~~---~~~~~d~v~   93 (208)
                      .+.+++|+||+|++|...++.+...|++|+++++++++.+.+. ..+... ..|..+..++...+.+.   ..+++|+++
T Consensus         3 ~~k~vlItGasggiG~~la~~l~~~G~~Vi~~~r~~~~~~~l~-~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~g~id~li   81 (277)
T PRK05993          3 MKRSILITGCSSGIGAYCARALQSDGWRVFATCRKEEDVAALE-AEGLEAFQLDYAEPESIAALVAQVLELSGGRLDALF   81 (277)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-HCCceEEEccCCCHHHHHHHHHHHHHHcCCCccEEE
Confidence            4678999999999999999988889999999999998887776 545433 34555442333333332   334799999


Q ss_pred             eCCC
Q 028523           94 ENVG   97 (208)
Q Consensus        94 d~~g   97 (208)
                      ++.|
T Consensus        82 ~~Ag   85 (277)
T PRK05993         82 NNGA   85 (277)
T ss_pred             ECCC
Confidence            9876

>PRK12742 oxidoreductase; Provisional

Probab=98.48  E-value=4e-06  Score=61.86  Aligned_cols=102  Identities=20%  Similarity=0.216  Sum_probs=66.5

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeC-CHHHHHHHHHhcCCCee-EecCCCccHHHHHHhHCCCCccEEEeC
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAG-SKDKVDLLKNKFGFDEA-FNYKEEPDLDAALKRYFPEGINIYFEN   95 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~-s~~~~~~~~~~~g~~~v-~~~~~~~~~~~~~~~~~~~~~d~v~d~   95 (208)
                      +++++||+||+|++|...++.+...|++|+.+.+ ++++.+.+.++++...+ .|..+...+.+.+.+.  +++|++|++
T Consensus         5 ~~k~vlItGasggIG~~~a~~l~~~G~~v~~~~~~~~~~~~~l~~~~~~~~~~~D~~~~~~~~~~~~~~--~~id~li~~   82 (237)
T PRK12742          5 TGKKVLVLGGSRGIGAAIVRRFVTDGANVRFTYAGSKDAAERLAQETGATAVQTDSADRDAVIDVVRKS--GALDILVVN   82 (237)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHhCCeEEecCCCCHHHHHHHHHHh--CCCcEEEEC
Confidence            4789999999999999999999999999888764 45555555435565322 3443321233333221  369999999


Q ss_pred             CCch----h----------------------HHHHHHhhccCCEEEEEeccc
Q 028523           96 VGGK----M----------------------LDAVLLNMRIQGRITLCGMIS  121 (208)
Q Consensus        96 ~g~~----~----------------------~~~~~~~l~~~G~~v~~g~~~  121 (208)
                      .|..    .                      ...+++.++.+|+++.++...
T Consensus        83 ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~  134 (237)
T PRK12742         83 AGIAVFGDALELDADDIDRLFKINIHAPYHASVEAARQMPEGGRIIIIGSVN  134 (237)
T ss_pred             CCCCCCCCcccCCHHHHHHHHhHHHHHHHHHHHHHHHHHhcCCeEEEEeccc
Confidence            8731    0                      123444566689999887754

>PRK06182 short chain dehydrogenase; Validated

Probab=98.46  E-value=3.8e-06  Score=63.46  Aligned_cols=79  Identities=24%  Similarity=0.397  Sum_probs=58.1

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCe-eEecCCCccHHHHHHhHC--CCCccEEEe
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDE-AFNYKEEPDLDAALKRYF--PEGINIYFE   94 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~-v~~~~~~~~~~~~~~~~~--~~~~d~v~d   94 (208)
                      ++.+++|+|++|++|...++.+...|++|+++++++++.+.+. ..+... ..|..+.+++...+.+..  .+++|++|+
T Consensus         2 ~~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~l~~~~-~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~~id~li~   80 (273)
T PRK06182          2 QKKVALVTGASSGIGKATARRLAAQGYTVYGAARRVDKMEDLA-SLGVHPLSLDVTDEASIKAAVDTIIAEEGRIDVLVN   80 (273)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-hCCCeEEEeeCCCHHHHHHHHHHHHHhcCCCCEEEE
Confidence            4678999999999999999998889999999999988776665 444432 356555423444444332  237999999


Q ss_pred             CCC
Q 028523           95 NVG   97 (208)
Q Consensus        95 ~~g   97 (208)
                      +.|
T Consensus        81 ~ag   83 (273)
T PRK06182         81 NAG   83 (273)
T ss_pred             CCC
Confidence            987

>PRK05693 short chain dehydrogenase; Provisional

Probab=98.46  E-value=4.3e-06  Score=63.23  Aligned_cols=77  Identities=19%  Similarity=0.364  Sum_probs=56.7

Q ss_pred             CEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCe-eEecCCCccHHHHHHhHCC--CCccEEEeCC
Q 028523           20 EYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDE-AFNYKEEPDLDAALKRYFP--EGINIYFENV   96 (208)
Q Consensus        20 ~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~-v~~~~~~~~~~~~~~~~~~--~~~d~v~d~~   96 (208)
                      .++||+||+|++|...++.+...|++|++++++.++.+.+. ..+... ..|..+...+.+.+.....  +++|++|++.
T Consensus         2 k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~-~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~vi~~a   80 (274)
T PRK05693          2 PVVLITGCSSGIGRALADAFKAAGYEVWATARKAEDVEALA-AAGFTAVQLDVNDGAALARLAEELEAEHGGLDVLINNA   80 (274)
T ss_pred             CEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HCCCeEEEeeCCCHHHHHHHHHHHHHhcCCCCEEEECC
Confidence            47899999999999999999889999999999988777666 455433 3566554234433433322  3699999998


Q ss_pred             C
Q 028523           97 G   97 (208)
Q Consensus        97 g   97 (208)
                      |
T Consensus        81 g   81 (274)
T PRK05693         81 G   81 (274)
T ss_pred             C
Confidence            7

>PRK08265 short chain dehydrogenase; Provisional

Probab=98.43  E-value=5.4e-06  Score=62.26  Aligned_cols=104  Identities=16%  Similarity=0.175  Sum_probs=70.1

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCe---eEecCCCccHHHHHHhHCC--CCccEE
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDE---AFNYKEEPDLDAALKRYFP--EGINIY   92 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~---v~~~~~~~~~~~~~~~~~~--~~~d~v   92 (208)
                      ++.+++|+||++++|...++.+...|++|+++++++++.+.+.++++...   ..|..+..++.+.+.....  +++|++
T Consensus         5 ~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~l   84 (261)
T PRK08265          5 AGKVAIVTGGATLIGAAVARALVAAGARVAIVDIDADNGAAVAASLGERARFIATDITDDAAIERAVATVVARFGRVDIL   84 (261)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCeeEEEEecCCCHHHHHHHHHHHHHHhCCCCEE
Confidence            46799999999999999999988899999999999887666654655321   2344443233333333221  268999


Q ss_pred             EeCCCch-------------------------hHHHHHHhh-ccCCEEEEEeccc
Q 028523           93 FENVGGK-------------------------MLDAVLLNM-RIQGRITLCGMIS  121 (208)
Q Consensus        93 ~d~~g~~-------------------------~~~~~~~~l-~~~G~~v~~g~~~  121 (208)
                      +++.|..                         .....++.| +++|+++.++...
T Consensus        85 v~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~g~ii~isS~~  139 (261)
T PRK08265         85 VNLACTYLDDGLASSRADWLAALDVNLVSAAMLAQAAHPHLARGGGAIVNFTSIS  139 (261)
T ss_pred             EECCCCCCCCcCcCCHHHHHHHHhHhhHHHHHHHHHHHHHHhcCCcEEEEECchh
Confidence            9987721                         012233444 5678999987654

>KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=98.36  E-value=1.2e-05  Score=60.32  Aligned_cols=106  Identities=19%  Similarity=0.291  Sum_probs=73.3

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH---hcCCCe-e----EecCCCccHHHHHHhHC--CC
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKN---KFGFDE-A----FNYKEEPDLDAALKRYF--PE   87 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~---~~g~~~-v----~~~~~~~~~~~~~~~~~--~~   87 (208)
                      .|..|+|+|||+|+|.+.+.-.-..|++++.+++..++++.+.+   +.+... +    +|..+.++....+.+..  -+
T Consensus        11 ~~kvVvITGASsGIG~~lA~~la~~G~~l~lvar~~rrl~~v~~~l~~~~~~~~v~~~~~Dvs~~~~~~~~~~~~~~~fg   90 (282)
T KOG1205|consen   11 AGKVVLITGASSGIGEALAYELAKRGAKLVLVARRARRLERVAEELRKLGSLEKVLVLQLDVSDEESVKKFVEWAIRHFG   90 (282)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHhCCCceEEeehhhhhHHHHHHHHHHhCCcCccEEEeCccCCHHHHHHHHHHHHHhcC
Confidence            57899999999999998888888889999999988887766622   333332 2    34444323443333322  23


Q ss_pred             CccEEEeCCC-chh-------------------------HHHHHHhhccC--CEEEEEeccccc
Q 028523           88 GINIYFENVG-GKM-------------------------LDAVLLNMRIQ--GRITLCGMISQY  123 (208)
Q Consensus        88 ~~d~v~d~~g-~~~-------------------------~~~~~~~l~~~--G~~v~~g~~~~~  123 (208)
                      ++|+.++..| +..                         ...+++.|++.  |+++.+++..|.
T Consensus        91 ~vDvLVNNAG~~~~~~~~~~~~~~~~~~mdtN~~G~V~~Tk~alp~m~~r~~GhIVvisSiaG~  154 (282)
T KOG1205|consen   91 RVDVLVNNAGISLVGFLEDTDIEDVRNVMDTNVFGTVYLTKAALPSMKKRNDGHIVVISSIAGK  154 (282)
T ss_pred             CCCEEEecCccccccccccCcHHHHHHHhhhhchhhHHHHHHHHHHhhhcCCCeEEEEeccccc
Confidence            7999999887 321                         25577777663  999999987763

>PRK08339 short chain dehydrogenase; Provisional

Probab=98.32  E-value=1.6e-05  Score=59.77  Aligned_cols=105  Identities=21%  Similarity=0.316  Sum_probs=70.0

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhc----CCC-e--eEecCCCccHHHHHHhHCC-CCc
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKF----GFD-E--AFNYKEEPDLDAALKRYFP-EGI   89 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~----g~~-~--v~~~~~~~~~~~~~~~~~~-~~~   89 (208)
                      +|.++||+||++++|.+.++.+...|++|+++++++++.+.+.+++    +.. .  ..|..+..+....+.+... +++
T Consensus         7 ~~k~~lItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~g~i   86 (263)
T PRK08339          7 SGKLAFTTASSKGIGFGVARVLARAGADVILLSRNEENLKKAREKIKSESNVDVSYIVADLTKREDLERTVKELKNIGEP   86 (263)
T ss_pred             CCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHHHHhhCCC
Confidence            4789999999999999999999999999999999888766554333    322 1  2344443233333333321 369


Q ss_pred             cEEEeCCCch-----------h---------------HHHHHHhhcc--CCEEEEEecccc
Q 028523           90 NIYFENVGGK-----------M---------------LDAVLLNMRI--QGRITLCGMISQ  122 (208)
Q Consensus        90 d~v~d~~g~~-----------~---------------~~~~~~~l~~--~G~~v~~g~~~~  122 (208)
                      |+++++.|..           .               ...+++.|..  .|+++.++....
T Consensus        87 D~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~m~~~~~g~Ii~isS~~~  147 (263)
T PRK08339         87 DIFFFSTGGPKPGYFMEMSMEDWEGAVKLLLYPAVYLTRALVPAMERKGFGRIIYSTSVAI  147 (263)
T ss_pred             cEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEcCccc
Confidence            9999988731           0               2345555643  489999887653

>PRK07109 short chain dehydrogenase; Provisional

Probab=98.31  E-value=1.3e-05  Score=62.39  Aligned_cols=105  Identities=22%  Similarity=0.206  Sum_probs=70.0

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH---hcCCCe---eEecCCCccHHHHHHhHCC--CCc
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKN---KFGFDE---AFNYKEEPDLDAALKRYFP--EGI   89 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~---~~g~~~---v~~~~~~~~~~~~~~~~~~--~~~   89 (208)
                      ++.+++|+||+|++|..+++.+...|++|+++++++++.+.+.+   +.|...   ..|..+..++.+.+.....  +++
T Consensus         7 ~~k~vlITGas~gIG~~la~~la~~G~~Vvl~~R~~~~l~~~~~~l~~~g~~~~~v~~Dv~d~~~v~~~~~~~~~~~g~i   86 (334)
T PRK07109          7 GRQVVVITGASAGVGRATARAFARRGAKVVLLARGEEGLEALAAEIRAAGGEALAVVADVADAEAVQAAADRAEEELGPI   86 (334)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHHHHCCCC
Confidence            46789999999999999999998899999999999887655442   334432   2455544233333332221  369


Q ss_pred             cEEEeCCCchh--------------------------HHHHHHhhcc--CCEEEEEecccc
Q 028523           90 NIYFENVGGKM--------------------------LDAVLLNMRI--QGRITLCGMISQ  122 (208)
Q Consensus        90 d~v~d~~g~~~--------------------------~~~~~~~l~~--~G~~v~~g~~~~  122 (208)
                      |++|++.|...                          ...+++.+.+  .|+++.+++...
T Consensus        87 D~lInnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~l~~~~~~~~g~iV~isS~~~  147 (334)
T PRK07109         87 DTWVNNAMVTVFGPFEDVTPEEFRRVTEVTYLGVVHGTLAALRHMRPRDRGAIIQVGSALA  147 (334)
T ss_pred             CEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEeCChhh
Confidence            99999987310                          1234555544  589999887654

>PRK05872 short chain dehydrogenase; Provisional

Probab=98.31  E-value=4.9e-06  Score=63.71  Aligned_cols=81  Identities=19%  Similarity=0.249  Sum_probs=58.8

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCC-e--e--EecCCCccHHHHHHhHCC--CCcc
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFD-E--A--FNYKEEPDLDAALKRYFP--EGIN   90 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~-~--v--~~~~~~~~~~~~~~~~~~--~~~d   90 (208)
                      +|.++||+||+|++|..+++.+...|++|+++++++++.+.+.++++.. .  .  .|..+..+..+.+.+...  +++|
T Consensus         8 ~gk~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id   87 (296)
T PRK05872          8 AGKVVVVTGAARGIGAELARRLHARGAKLALVDLEEAELAALAAELGGDDRVLTVVADVTDLAAMQAAAEEAVERFGGID   87 (296)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCC
Confidence            5789999999999999999999999999999999988877765466531 1  1  455543233333333322  3699


Q ss_pred             EEEeCCCc
Q 028523           91 IYFENVGG   98 (208)
Q Consensus        91 ~v~d~~g~   98 (208)
                      ++|++.|.
T Consensus        88 ~vI~nAG~   95 (296)
T PRK05872         88 VVVANAGI   95 (296)
T ss_pred             EEEECCCc
Confidence            99999883

>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases

Probab=98.30  E-value=6.2e-06  Score=55.58  Aligned_cols=95  Identities=19%  Similarity=0.242  Sum_probs=64.0

Q ss_pred             CCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHhcCCC--eeEecCCCccHHHHHHhHCCCCccEEE
Q 028523           17 KQGEYVFVSAASGAVGQLVGQFAKLVGC-YVVGSAGSKDKVDLLKNKFGFD--EAFNYKEEPDLDAALKRYFPEGINIYF   93 (208)
Q Consensus        17 ~~g~~vli~ga~g~vG~~a~qla~~~g~-~v~~~~~s~~~~~~~~~~~g~~--~v~~~~~~~~~~~~~~~~~~~~~d~v~   93 (208)
                      -++.+++|.|+ |++|.+++..+...|+ +++++.|+.++.+.+.+.++..  .++++.+   ..+.+.     .+|++|
T Consensus        10 l~~~~vlviGa-Gg~ar~v~~~L~~~g~~~i~i~nRt~~ra~~l~~~~~~~~~~~~~~~~---~~~~~~-----~~DivI   80 (135)
T PF01488_consen   10 LKGKRVLVIGA-GGAARAVAAALAALGAKEITIVNRTPERAEALAEEFGGVNIEAIPLED---LEEALQ-----EADIVI   80 (135)
T ss_dssp             GTTSEEEEESS-SHHHHHHHHHHHHTTSSEEEEEESSHHHHHHHHHHHTGCSEEEEEGGG---HCHHHH-----TESEEE
T ss_pred             cCCCEEEEECC-HHHHHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHcCccccceeeHHH---HHHHHh-----hCCeEE
Confidence            35889999996 9999999999999999 6999999999988887677432  3455543   222232     499999


Q ss_pred             eCCCchhH---HHHHHhhcc-CCEEEEEecc
Q 028523           94 ENVGGKML---DAVLLNMRI-QGRITLCGMI  120 (208)
Q Consensus        94 d~~g~~~~---~~~~~~l~~-~G~~v~~g~~  120 (208)
                      +|++....   ...+....+ -+.++.++.+
T Consensus        81 ~aT~~~~~~i~~~~~~~~~~~~~~v~Dla~P  111 (135)
T PF01488_consen   81 NATPSGMPIITEEMLKKASKKLRLVIDLAVP  111 (135)
T ss_dssp             E-SSTTSTSSTHHHHTTTCHHCSEEEES-SS
T ss_pred             EecCCCCcccCHHHHHHHHhhhhceeccccC
Confidence            99985422   223222222 1467776543

Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C ....

>PRK06500 short chain dehydrogenase; Provisional

Probab=98.26  E-value=2.4e-05  Score=58.14  Aligned_cols=80  Identities=13%  Similarity=0.162  Sum_probs=55.5

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCe---eEecCCCccHHHHHHhHC--CCCccEE
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDE---AFNYKEEPDLDAALKRYF--PEGINIY   92 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~---v~~~~~~~~~~~~~~~~~--~~~~d~v   92 (208)
                      ++.+++|+||+|++|...++.+...|++|++++++++..+.+.++++...   ..|..+..+....+....  .+++|++
T Consensus         5 ~~k~vlItGasg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~v   84 (249)
T PRK06500          5 QGKTALITGGTSGIGLETARQFLAEGARVAITGRDPASLEAARAELGESALVIRADAGDVAAQKALAQALAEAFGRLDAV   84 (249)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCCCEE
Confidence            46799999999999999999999999999999988777666554666532   223333212222222221  1368999


Q ss_pred             EeCCC
Q 028523           93 FENVG   97 (208)
Q Consensus        93 ~d~~g   97 (208)
                      |++.|
T Consensus        85 i~~ag   89 (249)
T PRK06500         85 FINAG   89 (249)
T ss_pred             EECCC
Confidence            99887

>PRK12771 putative glutamate synthase (NADPH) small subunit; Provisional

Probab=98.26  E-value=4.8e-06  Score=69.39  Aligned_cols=97  Identities=14%  Similarity=0.210  Sum_probs=64.3

Q ss_pred             CCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCC---------------------HHHHHHHHHhcCCCeeEecCC
Q 028523           15 SPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGS---------------------KDKVDLLKNKFGFDEAFNYKE   73 (208)
Q Consensus        15 ~~~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s---------------------~~~~~~~~~~~g~~~v~~~~~   73 (208)
                      ..+.|++|+|.|+ |++|+++++.++..|++|+++...                     +.+.+.++ ++|++..++...
T Consensus       133 ~~~~g~~V~VIGa-GpaGL~aA~~l~~~G~~V~v~e~~~~~GG~l~~gip~~~~~~~~~~~~l~~~~-~~Gv~~~~~~~~  210 (564)
T PRK12771        133 APDTGKRVAVIGG-GPAGLSAAYHLRRMGHAVTIFEAGPKLGGMMRYGIPAYRLPREVLDAEIQRIL-DLGVEVRLGVRV  210 (564)
T ss_pred             CCCCCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEecCCCCCCeeeecCCCccCCHHHHHHHHHHHH-HCCCEEEeCCEE
Confidence            4678999999996 999999999999999999888742                     34556677 789876655433


Q ss_pred             CccH-HHHHHhHCCCCccEEEeCCCch-hHHHHHHhhccCCEEEEE
Q 028523           74 EPDL-DAALKRYFPEGINIYFENVGGK-MLDAVLLNMRIQGRITLC  117 (208)
Q Consensus        74 ~~~~-~~~~~~~~~~~~d~v~d~~g~~-~~~~~~~~l~~~G~~v~~  117 (208)
                      ..+. .+.+    ..++|+||+++|.. .....+.....+|.+..+
T Consensus       211 ~~~~~~~~~----~~~~D~Vi~AtG~~~~~~~~i~g~~~~gv~~~~  252 (564)
T PRK12771        211 GEDITLEQL----EGEFDAVFVAIGAQLGKRLPIPGEDAAGVLDAV  252 (564)
T ss_pred             CCcCCHHHH----HhhCCEEEEeeCCCCCCcCCCCCCccCCcEEHH
Confidence            1121 1111    12599999999953 333333334444544433

>PRK06484 short chain dehydrogenase; Validated

Probab=98.26  E-value=1.7e-05  Score=65.44  Aligned_cols=106  Identities=15%  Similarity=0.188  Sum_probs=74.4

Q ss_pred             CCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCe---eEecCCCccHHHHHHhHCC--CCccE
Q 028523           17 KQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDE---AFNYKEEPDLDAALKRYFP--EGINI   91 (208)
Q Consensus        17 ~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~---v~~~~~~~~~~~~~~~~~~--~~~d~   91 (208)
                      ..|.++||+||++++|...++.+...|++|+++++++++.+.+.++++...   ..|..+.+.+.+.+.+...  +++|+
T Consensus       267 ~~~k~~lItGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~  346 (520)
T PRK06484        267 ESPRVVAITGGARGIGRAVADRFAAAGDRLLIIDRDAEGAKKLAEALGDEHLSVQADITDEAAVESAFAQIQARWGRLDV  346 (520)
T ss_pred             cCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceeEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            357899999999999999999888899999999999888877765565432   2455444234333433322  36999


Q ss_pred             EEeCCCc-h---h-----------------------HHHHHHhhccCCEEEEEecccc
Q 028523           92 YFENVGG-K---M-----------------------LDAVLLNMRIQGRITLCGMISQ  122 (208)
Q Consensus        92 v~d~~g~-~---~-----------------------~~~~~~~l~~~G~~v~~g~~~~  122 (208)
                      +|++.|. .   .                       .+.++..|+.+|+++.++...+
T Consensus       347 li~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~iv~isS~~~  404 (520)
T PRK06484        347 LVNNAGIAEVFKPSLEQSAEDFTRVYDVNLSGAFACARAAARLMSQGGVIVNLGSIAS  404 (520)
T ss_pred             EEECCCCcCCCCChhhCCHHHHHHHHHhCcHHHHHHHHHHHHHhccCCEEEEECchhh
Confidence            9998872 1   0                       2334556666799999887653

>PRK06057 short chain dehydrogenase; Provisional

Probab=98.26  E-value=9.5e-06  Score=60.66  Aligned_cols=80  Identities=15%  Similarity=0.185  Sum_probs=57.1

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCe-eEecCCCccHHHHHHhHCC--CCccEEEe
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDE-AFNYKEEPDLDAALKRYFP--EGINIYFE   94 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~-v~~~~~~~~~~~~~~~~~~--~~~d~v~d   94 (208)
                      +|.+++|+||+|++|...++.+...|++|+++++++.+.+...++++... ..|..+...+...+.+...  +++|.++.
T Consensus         6 ~~~~vlItGasggIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~   85 (255)
T PRK06057          6 AGRVAVITGGGSGIGLATARRLAAEGATVVVGDIDPEAGKAAADEVGGLFVPTDVTDEDAVNALFDTAAETYGSVDIAFN   85 (255)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCcEEEeeCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence            57899999999999999999998899999999998887666553555422 3455544233333333221  36899999


Q ss_pred             CCC
Q 028523           95 NVG   97 (208)
Q Consensus        95 ~~g   97 (208)
                      +.|
T Consensus        86 ~ag   88 (255)
T PRK06057         86 NAG   88 (255)
T ss_pred             CCC
Confidence            886

>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional

Probab=98.24  E-value=9.5e-06  Score=60.95  Aligned_cols=80  Identities=16%  Similarity=0.250  Sum_probs=57.1

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCC-e--eEecCCCccHHHHHHhHCC--CCccEE
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFD-E--AFNYKEEPDLDAALKRYFP--EGINIY   92 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~-~--v~~~~~~~~~~~~~~~~~~--~~~d~v   92 (208)
                      ++.+++|+||++++|...++.+...|++|+++++++++.+.+.++++.. .  ..|..+..+....+.+...  +++|++
T Consensus         5 ~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l   84 (263)
T PRK06200          5 HGQVALITGGGSGIGRALVERFLAEGARVAVLERSAEKLASLRQRFGDHVLVVEGDVTSYADNQRAVDQTVDAFGKLDCF   84 (263)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCcceEEEccCCCHHHHHHHHHHHHHhcCCCCEE
Confidence            5789999999999999999999889999999999988877776455432 1  2344433233333333322  369999


Q ss_pred             EeCCC
Q 028523           93 FENVG   97 (208)
Q Consensus        93 ~d~~g   97 (208)
                      |++.|
T Consensus        85 i~~ag   89 (263)
T PRK06200         85 VGNAG   89 (263)
T ss_pred             EECCC
Confidence            99887

>PRK12829 short chain dehydrogenase; Provisional

Probab=98.24  E-value=2e-05  Score=59.12  Aligned_cols=83  Identities=13%  Similarity=0.238  Sum_probs=56.8

Q ss_pred             CCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCC--e--eEecCCCccHHHHHHhHCC--CC
Q 028523           15 SPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFD--E--AFNYKEEPDLDAALKRYFP--EG   88 (208)
Q Consensus        15 ~~~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~--~--v~~~~~~~~~~~~~~~~~~--~~   88 (208)
                      ...++.++||+||+|++|..+++.+...|++|+++.++++..+.+.+.....  .  ..|..+...+.+.+.+...  ++
T Consensus         7 ~~~~~~~vlItGa~g~iG~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   86 (264)
T PRK12829          7 KPLDGLRVLVTGGASGIGRAIAEAFAEAGARVHVCDVSEAALAATAARLPGAKVTATVADVADPAQVERVFDTAVERFGG   86 (264)
T ss_pred             hccCCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCceEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence            3457789999999999999999998889999999999887766655333222  1  2344443223332332211  26


Q ss_pred             ccEEEeCCC
Q 028523           89 INIYFENVG   97 (208)
Q Consensus        89 ~d~v~d~~g   97 (208)
                      +|+||.+.|
T Consensus        87 ~d~vi~~ag   95 (264)
T PRK12829         87 LDVLVNNAG   95 (264)
T ss_pred             CCEEEECCC
Confidence            999999887

>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=98.23  E-value=2.8e-05  Score=63.11  Aligned_cols=80  Identities=18%  Similarity=0.262  Sum_probs=54.5

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCH--HHHHHHHHhcCCCe-eEecCCCccHHHHHHhHC--CCCccEE
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSK--DKVDLLKNKFGFDE-AFNYKEEPDLDAALKRYF--PEGINIY   92 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~--~~~~~~~~~~g~~~-v~~~~~~~~~~~~~~~~~--~~~~d~v   92 (208)
                      ++.++||+||+|++|...++.+...|++|++++++.  ++.+.+.++++... .+|..+.......+....  .+++|++
T Consensus       209 ~g~~vlItGasggIG~~la~~l~~~Ga~vi~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~id~v  288 (450)
T PRK08261        209 AGKVALVTGAARGIGAAIAEVLARDGAHVVCLDVPAAGEALAAVANRVGGTALALDITAPDAPARIAEHLAERHGGLDIV  288 (450)
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHHHHhCCCCCEE
Confidence            578999999999999999999988999999988643  33344443566432 356555422333333222  1269999


Q ss_pred             EeCCC
Q 028523           93 FENVG   97 (208)
Q Consensus        93 ~d~~g   97 (208)
                      |++.|
T Consensus       289 i~~AG  293 (450)
T PRK08261        289 VHNAG  293 (450)
T ss_pred             EECCC
Confidence            99987

>TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit

Probab=98.22  E-value=6e-05  Score=57.34  Aligned_cols=93  Identities=18%  Similarity=0.249  Sum_probs=69.1

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHHHHhHCCCCccEEEeCCC
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVG   97 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~d~v~d~~g   97 (208)
                      .|++++|+|. |.+|..+++.++..|++|++..+++++.+.+. +.|.. .+.+.   ++.+.+.     .+|+||++++
T Consensus       150 ~gk~v~IiG~-G~iG~avA~~L~~~G~~V~v~~R~~~~~~~~~-~~g~~-~~~~~---~l~~~l~-----~aDiVint~P  218 (287)
T TIGR02853       150 HGSNVMVLGF-GRTGMTIARTFSALGARVFVGARSSADLARIT-EMGLI-PFPLN---KLEEKVA-----EIDIVINTIP  218 (287)
T ss_pred             CCCEEEEEcC-hHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HCCCe-eecHH---HHHHHhc-----cCCEEEECCC
Confidence            5789999995 99999999999999999999999988877776 66643 22111   2222222     4899999997


Q ss_pred             chh-HHHHHHhhccCCEEEEEeccc
Q 028523           98 GKM-LDAVLLNMRIQGRITLCGMIS  121 (208)
Q Consensus        98 ~~~-~~~~~~~l~~~G~~v~~g~~~  121 (208)
                      ... -...+..++++..++.++..+
T Consensus       219 ~~ii~~~~l~~~k~~aliIDlas~P  243 (287)
T TIGR02853       219 ALVLTADVLSKLPKHAVIIDLASKP  243 (287)
T ss_pred             hHHhCHHHHhcCCCCeEEEEeCcCC
Confidence            543 345677888888888887754

This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA.

>PRK06139 short chain dehydrogenase; Provisional

Probab=98.22  E-value=1.2e-05  Score=62.60  Aligned_cols=80  Identities=19%  Similarity=0.312  Sum_probs=56.5

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH---hcCCCe---eEecCCCccHHHHHHhHC--CCCc
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKN---KFGFDE---AFNYKEEPDLDAALKRYF--PEGI   89 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~---~~g~~~---v~~~~~~~~~~~~~~~~~--~~~~   89 (208)
                      ++++++|+||+|++|...++.+...|++|+.+++++++.+.+.+   +.|...   ..|..+.+++...+.+..  .+++
T Consensus         6 ~~k~vlITGAs~GIG~aia~~la~~G~~Vvl~~R~~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i   85 (330)
T PRK06139          6 HGAVVVITGASSGIGQATAEAFARRGARLVLAARDEEALQAVAEECRALGAEVLVVPTDVTDADQVKALATQAASFGGRI   85 (330)
T ss_pred             CCCEEEEcCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHhcCCC
Confidence            56899999999999999999999999999999999887765442   345432   235554322322222221  2469


Q ss_pred             cEEEeCCC
Q 028523           90 NIYFENVG   97 (208)
Q Consensus        90 d~v~d~~g   97 (208)
                      |++|++.|
T Consensus        86 D~lVnnAG   93 (330)
T PRK06139         86 DVWVNNVG   93 (330)
T ss_pred             CEEEECCC
Confidence            99999987

>PRK07825 short chain dehydrogenase; Provisional

Probab=98.22  E-value=1e-05  Score=61.08  Aligned_cols=79  Identities=14%  Similarity=0.199  Sum_probs=56.5

Q ss_pred             CCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcC-CCe-eEecCCCccHHHHHHhHCC--CCccEEEe
Q 028523           19 GEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFG-FDE-AFNYKEEPDLDAALKRYFP--EGINIYFE   94 (208)
Q Consensus        19 g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g-~~~-v~~~~~~~~~~~~~~~~~~--~~~d~v~d   94 (208)
                      +.+++|+||+|++|...++.+...|++|+++++++++.+.+.++++ ... ..|..+.+++.+.+.....  +++|++++
T Consensus         5 ~~~ilVtGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~li~   84 (273)
T PRK07825          5 GKVVAITGGARGIGLATARALAALGARVAIGDLDEALAKETAAELGLVVGGPLDVTDPASFAAFLDAVEADLGPIDVLVN   84 (273)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhccceEEEccCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence            5789999999999999998888889999999999888776654555 221 3455544233333333321  36999999


Q ss_pred             CCC
Q 028523           95 NVG   97 (208)
Q Consensus        95 ~~g   97 (208)
                      +.|
T Consensus        85 ~ag   87 (273)
T PRK07825         85 NAG   87 (273)
T ss_pred             CCC
Confidence            987

>PTZ00075 Adenosylhomocysteinase; Provisional

Probab=98.19  E-value=1.9e-05  Score=63.34  Aligned_cols=91  Identities=18%  Similarity=0.181  Sum_probs=70.1

Q ss_pred             CCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHHHHhHCCCCccEEEeC
Q 028523           16 PKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFEN   95 (208)
Q Consensus        16 ~~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~d~v~d~   95 (208)
                      .-.|++++|.|. |.+|...++.++.+|++|+++.+++.+...+. ..|+..+       ++.+.++     ..|+++.+
T Consensus       251 ~LaGKtVgVIG~-G~IGr~vA~rL~a~Ga~ViV~e~dp~~a~~A~-~~G~~~~-------~leell~-----~ADIVI~a  316 (476)
T PTZ00075        251 MIAGKTVVVCGY-GDVGKGCAQALRGFGARVVVTEIDPICALQAA-MEGYQVV-------TLEDVVE-----TADIFVTA  316 (476)
T ss_pred             CcCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCchhHHHHH-hcCceec-------cHHHHHh-----cCCEEEEC
Confidence            457999999995 99999999999999999999987776654555 4464311       3333332     48999999


Q ss_pred             CCc-hhH-HHHHHhhccCCEEEEEecc
Q 028523           96 VGG-KML-DAVLLNMRIQGRITLCGMI  120 (208)
Q Consensus        96 ~g~-~~~-~~~~~~l~~~G~~v~~g~~  120 (208)
                      +|. ..+ ...+..|++++.++.+|..
T Consensus       317 tGt~~iI~~e~~~~MKpGAiLINvGr~  343 (476)
T PTZ00075        317 TGNKDIITLEHMRRMKNNAIVGNIGHF  343 (476)
T ss_pred             CCcccccCHHHHhccCCCcEEEEcCCC
Confidence            985 444 4899999999999999875

>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase

Probab=98.19  E-value=1.3e-05  Score=60.13  Aligned_cols=80  Identities=20%  Similarity=0.214  Sum_probs=56.1

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCC-e--eEecCCCccHHHHHHhHCC--CCccEE
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFD-E--AFNYKEEPDLDAALKRYFP--EGINIY   92 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~-~--v~~~~~~~~~~~~~~~~~~--~~~d~v   92 (208)
                      ++.+++|+||+|++|...++.+...|++|++++++.++.+.+.+..+.. .  ..|..+..+..+.+.+...  +++|++
T Consensus         4 ~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l   83 (262)
T TIGR03325         4 KGEVVLVTGGASGLGRAIVDRFVAEGARVAVLDKSAAGLQELEAAHGDAVVGVEGDVRSLDDHKEAVARCVAAFGKIDCL   83 (262)
T ss_pred             CCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhhcCCceEEEEeccCCHHHHHHHHHHHHHHhCCCCEE
Confidence            4789999999999999999998889999999999888777766333422 1  2344433123333333322  368999


Q ss_pred             EeCCC
Q 028523           93 FENVG   97 (208)
Q Consensus        93 ~d~~g   97 (208)
                      +++.|
T Consensus        84 i~~Ag   88 (262)
T TIGR03325        84 IPNAG   88 (262)
T ss_pred             EECCC
Confidence            99876

Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.

>PRK07806 short chain dehydrogenase; Provisional

Probab=98.19  E-value=4e-05  Score=57.00  Aligned_cols=103  Identities=17%  Similarity=0.204  Sum_probs=64.7

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHH-HHHHHHH---hcCCC-e--eEecCCCccHHHHHHhHCC--CC
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKD-KVDLLKN---KFGFD-E--AFNYKEEPDLDAALKRYFP--EG   88 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~-~~~~~~~---~~g~~-~--v~~~~~~~~~~~~~~~~~~--~~   88 (208)
                      .+.+++|+||+|++|...++.+...|++|++++++.+ +.+.+.+   ..+.. .  ..|..+.+++...+.+...  ++
T Consensus         5 ~~k~vlItGasggiG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   84 (248)
T PRK07806          5 PGKTALVTGSSRGIGADTAKILAGAGAHVVVNYRQKAPRANKVVAEIEAAGGRASAVGADLTDEESVAALMDTAREEFGG   84 (248)
T ss_pred             CCcEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCchHhHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhCCC
Confidence            4678999999999999999988888999999887653 3332221   22322 1  2354443233333333222  26


Q ss_pred             ccEEEeCCCch--------------------hHHHHHHhhccCCEEEEEecc
Q 028523           89 INIYFENVGGK--------------------MLDAVLLNMRIQGRITLCGMI  120 (208)
Q Consensus        89 ~d~v~d~~g~~--------------------~~~~~~~~l~~~G~~v~~g~~  120 (208)
                      +|+++.+.+..                    .++.+.+.+..+|+++.++..
T Consensus        85 ~d~vi~~ag~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~iv~isS~  136 (248)
T PRK07806         85 LDALVLNASGGMESGMDEDYAMRLNRDAQRNLARAALPLMPAGSRVVFVTSH  136 (248)
T ss_pred             CcEEEECCCCCCCCCCCcceeeEeeeHHHHHHHHHHHhhccCCceEEEEeCc
Confidence            89999887631                    234455555667899888763

>PRK07326 short chain dehydrogenase; Provisional

Probab=98.17  E-value=3e-05  Score=57.19  Aligned_cols=80  Identities=15%  Similarity=0.288  Sum_probs=54.8

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCC---Cee--EecCCCccHHHHHHhHCC--CCcc
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGF---DEA--FNYKEEPDLDAALKRYFP--EGIN   90 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~---~~v--~~~~~~~~~~~~~~~~~~--~~~d   90 (208)
                      .+.+++|+||+|++|..+++.+...|++|+++++++++.+.+.+++..   ...  .|..+..++.+.+.....  +++|
T Consensus         5 ~~~~ilItGatg~iG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d   84 (237)
T PRK07326          5 KGKVALITGGSKGIGFAIAEALLAEGYKVAITARDQKELEEAAAELNNKGNVLGLAADVRDEADVQRAVDAIVAAFGGLD   84 (237)
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHCCCEEEEeeCCHHHHHHHHHHHhccCcEEEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence            468899999999999999988877899999999988876665534432   122  243333233333333321  2699


Q ss_pred             EEEeCCC
Q 028523           91 IYFENVG   97 (208)
Q Consensus        91 ~v~d~~g   97 (208)
                      ++|++.|
T Consensus        85 ~vi~~ag   91 (237)
T PRK07326         85 VLIANAG   91 (237)
T ss_pred             EEEECCC
Confidence            9999876

>cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase

Probab=98.17  E-value=4.9e-05  Score=58.62  Aligned_cols=89  Identities=17%  Similarity=0.201  Sum_probs=61.5

Q ss_pred             hhhHHHHHHHhcCC---CCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHH
Q 028523            3 GMTAYAGFFEVCSP---KQGEYVFVSAASGAVGQLVGQFAKLVGC-YVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLD   78 (208)
Q Consensus         3 ~~tA~~~l~~~~~~---~~g~~vli~ga~g~vG~~a~qla~~~g~-~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~   78 (208)
                      ..+++.++......   .++.+|+|.|+ |.+|..+++.++..|+ +|+++.+++++...+.+++|.. ++++.   ++.
T Consensus       159 ~sv~~~Av~~a~~~~~~l~~~~V~ViGa-G~iG~~~a~~L~~~g~~~V~v~~r~~~ra~~la~~~g~~-~~~~~---~~~  233 (311)
T cd05213         159 VSISSAAVELAEKIFGNLKGKKVLVIGA-GEMGELAAKHLAAKGVAEITIANRTYERAEELAKELGGN-AVPLD---ELL  233 (311)
T ss_pred             cCHHHHHHHHHHHHhCCccCCEEEEECc-HHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHcCCe-EEeHH---HHH
Confidence            44566666332221   47899999996 9999999999988876 8999999988765554488873 33321   233


Q ss_pred             HHHHhHCCCCccEEEeCCCchhH
Q 028523           79 AALKRYFPEGINIYFENVGGKML  101 (208)
Q Consensus        79 ~~~~~~~~~~~d~v~d~~g~~~~  101 (208)
                      +.+.     .+|+||.|++.+..
T Consensus       234 ~~l~-----~aDvVi~at~~~~~  251 (311)
T cd05213         234 ELLN-----EADVVISATGAPHY  251 (311)
T ss_pred             HHHh-----cCCEEEECCCCCch
Confidence            3332     38999999996543

Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate,

>PRK07060 short chain dehydrogenase; Provisional

Probab=98.17  E-value=2.5e-05  Score=57.88  Aligned_cols=78  Identities=22%  Similarity=0.325  Sum_probs=56.1

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCe-eEecCCCccHHHHHHhHCCCCccEEEeCC
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDE-AFNYKEEPDLDAALKRYFPEGINIYFENV   96 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~-v~~~~~~~~~~~~~~~~~~~~~d~v~d~~   96 (208)
                      ++.+++|+|++|++|...++.+...|++|+++++++++.+.+.+..+... ..|..+...+...+..  .+++|++|++.
T Consensus         8 ~~~~~lItGa~g~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~--~~~~d~vi~~a   85 (245)
T PRK07060          8 SGKSVLVTGASSGIGRACAVALAQRGARVVAAARNAAALDRLAGETGCEPLRLDVGDDAAIRAALAA--AGAFDGLVNCA   85 (245)
T ss_pred             CCCEEEEeCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCeEEEecCCCHHHHHHHHHH--hCCCCEEEECC
Confidence            56899999999999999999999999999999999887766654555432 3454443122222222  23699999988


Q ss_pred             C
Q 028523           97 G   97 (208)
Q Consensus        97 g   97 (208)
                      |
T Consensus        86 g   86 (245)
T PRK07060         86 G   86 (245)
T ss_pred             C
Confidence            7

>PRK06484 short chain dehydrogenase; Validated

Probab=98.17  E-value=3.4e-05  Score=63.71  Aligned_cols=80  Identities=21%  Similarity=0.340  Sum_probs=59.3

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCe---eEecCCCccHHHHHHhHCC--CCccEE
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDE---AFNYKEEPDLDAALKRYFP--EGINIY   92 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~---v~~~~~~~~~~~~~~~~~~--~~~d~v   92 (208)
                      ++.+++|+|+++++|.+.++.+...|++|+.++++.++.+.+.++++...   .+|..+..++.+.+.+...  +++|++
T Consensus         4 ~~k~~lITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~iD~l   83 (520)
T PRK06484          4 QSRVVLVTGAAGGIGRAACQRFARAGDQVVVADRNVERARERADSLGPDHHALAMDVSDEAQIREGFEQLHREFGRIDVL   83 (520)
T ss_pred             CCeEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceeEEEeccCCHHHHHHHHHHHHHHhCCCCEE
Confidence            57899999999999999999999999999999999888776665666432   3455544234444443322  369999


Q ss_pred             EeCCC
Q 028523           93 FENVG   97 (208)
Q Consensus        93 ~d~~g   97 (208)
                      +++.|
T Consensus        84 i~nag   88 (520)
T PRK06484         84 VNNAG   88 (520)
T ss_pred             EECCC
Confidence            99876

>PRK12939 short chain dehydrogenase; Provisional

Probab=98.15  E-value=3.3e-05  Score=57.37  Aligned_cols=81  Identities=16%  Similarity=0.196  Sum_probs=54.5

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhc---CCC-e--eEecCCCccHHHHHHhHCC--CCc
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKF---GFD-E--AFNYKEEPDLDAALKRYFP--EGI   89 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~---g~~-~--v~~~~~~~~~~~~~~~~~~--~~~   89 (208)
                      ++.+++|+||+|++|...+..+...|++|+++++++++.+.+.+++   +.. .  ..|..+...+.+.+.+...  +++
T Consensus         6 ~~~~vlItGa~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   85 (250)
T PRK12939          6 AGKRALVTGAARGLGAAFAEALAEAGATVAFNDGLAAEARELAAALEAAGGRAHAIAADLADPASVQRFFDAAAAALGGL   85 (250)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            4789999999999999999988889999999998887665443232   322 2  2344433122222222211  369


Q ss_pred             cEEEeCCCc
Q 028523           90 NIYFENVGG   98 (208)
Q Consensus        90 d~v~d~~g~   98 (208)
                      |++|.+.|.
T Consensus        86 d~vi~~ag~   94 (250)
T PRK12939         86 DGLVNNAGI   94 (250)
T ss_pred             CEEEECCCC
Confidence            999999873

>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B

Probab=98.15  E-value=0.0001  Score=52.15  Aligned_cols=93  Identities=18%  Similarity=0.200  Sum_probs=63.7

Q ss_pred             EEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHHHHhHCCCCccEEEeCCCc---
Q 028523           22 VFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVGG---   98 (208)
Q Consensus        22 vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~d~v~d~~g~---   98 (208)
                      |+|+||+|.+|...++.+...|.+|++.+|++++.+.   ..+. +++..+-. +. +.+.+... ++|.||.+.|.   
T Consensus         1 I~V~GatG~vG~~l~~~L~~~~~~V~~~~R~~~~~~~---~~~~-~~~~~d~~-d~-~~~~~al~-~~d~vi~~~~~~~~   73 (183)
T PF13460_consen    1 ILVFGATGFVGRALAKQLLRRGHEVTALVRSPSKAED---SPGV-EIIQGDLF-DP-DSVKAALK-GADAVIHAAGPPPK   73 (183)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTSEEEEEESSGGGHHH---CTTE-EEEESCTT-CH-HHHHHHHT-TSSEEEECCHSTTT
T ss_pred             eEEECCCChHHHHHHHHHHHCCCEEEEEecCchhccc---cccc-ccceeeeh-hh-hhhhhhhh-hcchhhhhhhhhcc
Confidence            7899999999999999999999999999999987765   2233 23322222 32 22222222 59999999982   


Q ss_pred             --hhHHHHHHhhccCC--EEEEEeccc
Q 028523           99 --KMLDAVLLNMRIQG--RITLCGMIS  121 (208)
Q Consensus        99 --~~~~~~~~~l~~~G--~~v~~g~~~  121 (208)
                        +.....++.++..|  +++.++...
T Consensus        74 ~~~~~~~~~~a~~~~~~~~~v~~s~~~  100 (183)
T PF13460_consen   74 DVDAAKNIIEAAKKAGVKRVVYLSSAG  100 (183)
T ss_dssp             HHHHHHHHHHHHHHTTSSEEEEEEETT
T ss_pred             cccccccccccccccccccceeeeccc
Confidence              24556666665543  788777654

...

>PRK08267 short chain dehydrogenase; Provisional

Probab=98.14  E-value=6.8e-05  Score=56.19  Aligned_cols=78  Identities=19%  Similarity=0.338  Sum_probs=55.6

Q ss_pred             CEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcC-CC---eeEecCCCccHHHHHHhHC---CCCccEE
Q 028523           20 EYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFG-FD---EAFNYKEEPDLDAALKRYF---PEGINIY   92 (208)
Q Consensus        20 ~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g-~~---~v~~~~~~~~~~~~~~~~~---~~~~d~v   92 (208)
                      .++||+||+|++|...++.+...|++|++++++.++.+.+.+.++ ..   ...|..+..++.+.+....   .+++|++
T Consensus         2 k~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~~id~v   81 (260)
T PRK08267          2 KSIFITGAASGIGRATALLFAAEGWRVGAYDINEAGLAALAAELGAGNAWTGALDVTDRAAWDAALADFAAATGGRLDVL   81 (260)
T ss_pred             cEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCCEE
Confidence            479999999999999999888889999999999888777653443 11   1345554323333333321   3479999


Q ss_pred             EeCCC
Q 028523           93 FENVG   97 (208)
Q Consensus        93 ~d~~g   97 (208)
                      +.+.|
T Consensus        82 i~~ag   86 (260)
T PRK08267         82 FNNAG   86 (260)
T ss_pred             EECCC
Confidence            99987

>PRK07576 short chain dehydrogenase; Provisional

Probab=98.13  E-value=1.3e-05  Score=60.26  Aligned_cols=80  Identities=18%  Similarity=0.245  Sum_probs=54.7

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhc---CCC-e--eEecCCCccHHHHHHhHCC--CCc
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKF---GFD-E--AFNYKEEPDLDAALKRYFP--EGI   89 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~---g~~-~--v~~~~~~~~~~~~~~~~~~--~~~   89 (208)
                      ++.+++|+||+|++|...++.+...|++|+.+++++++.+...+++   +.. .  .+|..+..++...+.+...  +++
T Consensus         8 ~~k~ilItGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~~~i   87 (264)
T PRK07576          8 AGKNVVVVGGTSGINLGIAQAFARAGANVAVASRSQEKVDAAVAQLQQAGPEGLGVSADVRDYAAVEAAFAQIADEFGPI   87 (264)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence            5789999999999999999988889999999998877654443222   222 1  2344443234343444322  268


Q ss_pred             cEEEeCCC
Q 028523           90 NIYFENVG   97 (208)
Q Consensus        90 d~v~d~~g   97 (208)
                      |++|.+.|
T Consensus        88 D~vi~~ag   95 (264)
T PRK07576         88 DVLVSGAA   95 (264)
T ss_pred             CEEEECCC
Confidence            99998875

>PRK06196 oxidoreductase; Provisional

Probab=98.12  E-value=2.3e-05  Score=60.59  Aligned_cols=80  Identities=18%  Similarity=0.209  Sum_probs=56.0

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCe--eEecCCCccHHHHHHhHCC--CCccEEE
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDE--AFNYKEEPDLDAALKRYFP--EGINIYF   93 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~--v~~~~~~~~~~~~~~~~~~--~~~d~v~   93 (208)
                      .+.+++|+||+|++|..+++.+...|++|+++++++++.+.+.+++....  ..|..+...+.+.+.+...  +++|++|
T Consensus        25 ~~k~vlITGasggIG~~~a~~L~~~G~~Vv~~~R~~~~~~~~~~~l~~v~~~~~Dl~d~~~v~~~~~~~~~~~~~iD~li  104 (315)
T PRK06196         25 SGKTAIVTGGYSGLGLETTRALAQAGAHVIVPARRPDVAREALAGIDGVEVVMLDLADLESVRAFAERFLDSGRRIDILI  104 (315)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhhCeEEEccCCCHHHHHHHHHHHHhcCCCCCEEE
Confidence            56899999999999999998888889999999999887665543432112  2344443233333433322  3799999


Q ss_pred             eCCC
Q 028523           94 ENVG   97 (208)
Q Consensus        94 d~~g   97 (208)
                      ++.|
T Consensus       105 ~nAg  108 (315)
T PRK06196        105 NNAG  108 (315)
T ss_pred             ECCC
Confidence            9887

>PRK12828 short chain dehydrogenase; Provisional

Probab=98.11  E-value=6.6e-05  Score=55.32  Aligned_cols=80  Identities=11%  Similarity=0.140  Sum_probs=52.0

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhc---CCCe-eEecCCCccHHHHHHhHCC--CCccE
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKF---GFDE-AFNYKEEPDLDAALKRYFP--EGINI   91 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~---g~~~-v~~~~~~~~~~~~~~~~~~--~~~d~   91 (208)
                      ++.++||+|++|++|..+++.+...|++|+.+++++++.....+++   +... ..|..+..++...+.+...  +++|.
T Consensus         6 ~~k~vlItGatg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~   85 (239)
T PRK12828          6 QGKVVAITGGFGGLGRATAAWLAARGARVALIGRGAAPLSQTLPGVPADALRIGGIDLVDPQAARRAVDEVNRQFGRLDA   85 (239)
T ss_pred             CCCEEEEECCCCcHhHHHHHHHHHCCCeEEEEeCChHhHHHHHHHHhhcCceEEEeecCCHHHHHHHHHHHHHHhCCcCE
Confidence            3789999999999999999988888999999998776543322122   2221 2344333123332332221  26999


Q ss_pred             EEeCCC
Q 028523           92 YFENVG   97 (208)
Q Consensus        92 v~d~~g   97 (208)
                      ++++.|
T Consensus        86 vi~~ag   91 (239)
T PRK12828         86 LVNIAG   91 (239)
T ss_pred             EEECCc
Confidence            999876

>PRK07062 short chain dehydrogenase; Provisional

Probab=98.11  E-value=2e-05  Score=59.19  Aligned_cols=80  Identities=15%  Similarity=0.230  Sum_probs=55.5

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhc----CCCe----eEecCCCccHHHHHHhHCC--C
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKF----GFDE----AFNYKEEPDLDAALKRYFP--E   87 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~----g~~~----v~~~~~~~~~~~~~~~~~~--~   87 (208)
                      .|.+++|+||++++|...++.+...|++|+.+++++++.+.+.+++    +...    ..|..+.+...+.+.+...  +
T Consensus         7 ~~k~~lItGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g   86 (265)
T PRK07062          7 EGRVAVVTGGSSGIGLATVELLLEAGASVAICGRDEERLASAEARLREKFPGARLLAARCDVLDEADVAAFAAAVEARFG   86 (265)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEecCCCHHHHHHHHHHHHHhcC
Confidence            5789999999999999999999999999999999987765543222    1111    2344443233333333322  3


Q ss_pred             CccEEEeCCC
Q 028523           88 GINIYFENVG   97 (208)
Q Consensus        88 ~~d~v~d~~g   97 (208)
                      ++|+++++.|
T Consensus        87 ~id~li~~Ag   96 (265)
T PRK07062         87 GVDMLVNNAG   96 (265)
T ss_pred             CCCEEEECCC
Confidence            6999999987

>PF12847 Methyltransf_18: Methyltransferase domain; PDB: 3G2Q_A 3G2O_A 3G2M_B 3G2P_B 3D2L_B 1IM8_B 3NJR_A 3E05_H 3EVZ_A 3HM2_A

Probab=98.11  E-value=2.3e-05  Score=50.85  Aligned_cols=95  Identities=18%  Similarity=0.304  Sum_probs=64.5

Q ss_pred             CCCEEEEecCCchHHHHHHHHHH-HcCCEEEEEeCCHHHHHHHHHhc---CCCeeEecCCCccHHHHHHhHCCCCccEEE
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAK-LVGCYVVGSAGSKDKVDLLKNKF---GFDEAFNYKEEPDLDAALKRYFPEGINIYF   93 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~-~~g~~v~~~~~s~~~~~~~~~~~---g~~~v~~~~~~~~~~~~~~~~~~~~~d~v~   93 (208)
                      ||.+||-.|+  |.|..++.+++ ..+++|++++.+++-.+.+++..   +...-+..... ++ . ......+++|+|+
T Consensus         1 p~~~vLDlGc--G~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~-d~-~-~~~~~~~~~D~v~   75 (112)
T PF12847_consen    1 PGGRVLDLGC--GTGRLSIALARLFPGARVVGVDISPEMLEIARERAAEEGLSDRITFVQG-DA-E-FDPDFLEPFDLVI   75 (112)
T ss_dssp             TTCEEEEETT--TTSHHHHHHHHHHTTSEEEEEESSHHHHHHHHHHHHHTTTTTTEEEEES-CC-H-GGTTTSSCEEEEE
T ss_pred             CCCEEEEEcC--cCCHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCeEEEEC-cc-c-cCcccCCCCCEEE
Confidence            5789999984  56888889998 46889999999999888887655   32221111122 33 1 1111223799999


Q ss_pred             eCC-Cc----h------hHHHHHHhhccCCEEEEE
Q 028523           94 ENV-GG----K------MLDAVLLNMRIQGRITLC  117 (208)
Q Consensus        94 d~~-g~----~------~~~~~~~~l~~~G~~v~~  117 (208)
                      ... ..    .      .++.+.+.|+|||+++.-
T Consensus        76 ~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~lvi~  110 (112)
T PF12847_consen   76 CSGFTLHFLLPLDERRRVLERIRRLLKPGGRLVIN  110 (112)
T ss_dssp             ECSGSGGGCCHHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred             ECCCccccccchhHHHHHHHHHHHhcCCCcEEEEE
Confidence            877 21    1      278889999999998763

...

>PRK10538 malonic semialdehyde reductase; Provisional

Probab=98.10  E-value=8.2e-05  Score=55.38  Aligned_cols=77  Identities=17%  Similarity=0.347  Sum_probs=54.0

Q ss_pred             EEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCe---eEecCCCccHHHHHHhHCC--CCccEEEeC
Q 028523           21 YVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDE---AFNYKEEPDLDAALKRYFP--EGINIYFEN   95 (208)
Q Consensus        21 ~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~---v~~~~~~~~~~~~~~~~~~--~~~d~v~d~   95 (208)
                      +++|+||+|++|...++.+...|++|+++++++++.+.+.+.++...   ..|..+..++.+.+.....  +++|.++.+
T Consensus         2 ~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~id~vi~~   81 (248)
T PRK10538          2 IVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDELGDNLYIAQLDVRNRAAIEEMLASLPAEWRNIDVLVNN   81 (248)
T ss_pred             EEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhccceEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEEC
Confidence            68999999999999999988889999999999888776654455421   2344433223333333222  269999998


Q ss_pred             CC
Q 028523           96 VG   97 (208)
Q Consensus        96 ~g   97 (208)
                      .|
T Consensus        82 ag   83 (248)
T PRK10538         82 AG   83 (248)
T ss_pred             CC
Confidence            76

>PRK07063 short chain dehydrogenase; Provisional

Probab=98.10  E-value=2e-05  Score=59.12  Aligned_cols=80  Identities=14%  Similarity=0.170  Sum_probs=55.1

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhc-----CCC-e--eEecCCCccHHHHHHhHCC--C
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKF-----GFD-E--AFNYKEEPDLDAALKRYFP--E   87 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~-----g~~-~--v~~~~~~~~~~~~~~~~~~--~   87 (208)
                      .+.+++|+||++++|...++.+...|++|+.+++++++.+.+.+++     +.. .  ..|..+..++.+.+.+...  +
T Consensus         6 ~~k~vlVtGas~gIG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g   85 (260)
T PRK07063          6 AGKVALVTGAAQGIGAAIARAFAREGAAVALADLDAALAERAAAAIARDVAGARVLAVPADVTDAASVAAAVAAAEEAFG   85 (260)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhccCCceEEEEEccCCCHHHHHHHHHHHHHHhC
Confidence            4788999999999999999988889999999999887766554333     211 1  2344433233333333221  3


Q ss_pred             CccEEEeCCC
Q 028523           88 GINIYFENVG   97 (208)
Q Consensus        88 ~~d~v~d~~g   97 (208)
                      ++|++|++.|
T Consensus        86 ~id~li~~ag   95 (260)
T PRK07063         86 PLDVLVNNAG   95 (260)
T ss_pred             CCcEEEECCC
Confidence            6999999887

>PRK08017 oxidoreductase; Provisional

Probab=98.09  E-value=4.2e-05  Score=57.10  Aligned_cols=77  Identities=17%  Similarity=0.293  Sum_probs=56.2

Q ss_pred             CEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCe-eEecCCCccHHH---HHHhHCCCCccEEEeC
Q 028523           20 EYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDE-AFNYKEEPDLDA---ALKRYFPEGINIYFEN   95 (208)
Q Consensus        20 ~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~-v~~~~~~~~~~~---~~~~~~~~~~d~v~d~   95 (208)
                      ++++|+||+|++|..+++.+...|++|++++++.++.+.++ +.+... ..|..+...+.+   .+.+...+++|.++.+
T Consensus         3 k~vlVtGasg~IG~~la~~l~~~g~~v~~~~r~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~~~~ii~~   81 (256)
T PRK08017          3 KSVLITGCSSGIGLEAALELKRRGYRVLAACRKPDDVARMN-SLGFTGILLDLDDPESVERAADEVIALTDNRLYGLFNN   81 (256)
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHhHHHH-hCCCeEEEeecCCHHHHHHHHHHHHHhcCCCCeEEEEC
Confidence            47999999999999999999989999999999998887777 666543 345544312222   2222233468888888


Q ss_pred             CC
Q 028523           96 VG   97 (208)
Q Consensus        96 ~g   97 (208)
                      .|
T Consensus        82 ag   83 (256)
T PRK08017         82 AG   83 (256)
T ss_pred             CC
Confidence            76

>PRK05866 short chain dehydrogenase; Provisional

Probab=98.09  E-value=2e-05  Score=60.34  Aligned_cols=80  Identities=23%  Similarity=0.360  Sum_probs=54.6

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhc---CCC-e--eEecCCCccHHHHHHhHC--CCCc
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKF---GFD-E--AFNYKEEPDLDAALKRYF--PEGI   89 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~---g~~-~--v~~~~~~~~~~~~~~~~~--~~~~   89 (208)
                      .+.+++|+||+|++|...++.+...|++|++++++.++.+.+.+++   +.. .  ..|..+...+.+.+....  -+++
T Consensus        39 ~~k~vlItGasggIG~~la~~La~~G~~Vi~~~R~~~~l~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g~i  118 (293)
T PRK05866         39 TGKRILLTGASSGIGEAAAEQFARRGATVVAVARREDLLDAVADRITRAGGDAMAVPCDLSDLDAVDALVADVEKRIGGV  118 (293)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            3578999999999999999988888999999999987766554332   322 1  234443322333333221  1369


Q ss_pred             cEEEeCCC
Q 028523           90 NIYFENVG   97 (208)
Q Consensus        90 d~v~d~~g   97 (208)
                      |+++++.|
T Consensus       119 d~li~~AG  126 (293)
T PRK05866        119 DILINNAG  126 (293)
T ss_pred             CEEEECCC
Confidence            99999987

>PRK07832 short chain dehydrogenase; Provisional

Probab=98.09  E-value=7.5e-05  Score=56.42  Aligned_cols=77  Identities=13%  Similarity=0.169  Sum_probs=52.1

Q ss_pred             EEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHh---cCCC----eeEecCCCccHHHHHHhHC--CCCccE
Q 028523           21 YVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNK---FGFD----EAFNYKEEPDLDAALKRYF--PEGINI   91 (208)
Q Consensus        21 ~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~---~g~~----~v~~~~~~~~~~~~~~~~~--~~~~d~   91 (208)
                      +++|+||+|++|..+++.+...|++|+++.++++..+.+.++   .+..    ...|..+.....+.+.+..  .+++|+
T Consensus         2 ~vlItGas~giG~~la~~la~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~   81 (272)
T PRK07832          2 RCFVTGAASGIGRATALRLAAQGAELFLTDRDADGLAQTVADARALGGTVPEHRALDISDYDAVAAFAADIHAAHGSMDV   81 (272)
T ss_pred             EEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEeeCCCHHHHHHHHHHHHHhcCCCCE
Confidence            689999999999999998888999999999887765444322   2332    1245554422332233322  136999


Q ss_pred             EEeCCC
Q 028523           92 YFENVG   97 (208)
Q Consensus        92 v~d~~g   97 (208)
                      +|++.|
T Consensus        82 lv~~ag   87 (272)
T PRK07832         82 VMNIAG   87 (272)
T ss_pred             EEECCC
Confidence            999987

>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional

Probab=98.08  E-value=0.00012  Score=60.31  Aligned_cols=103  Identities=15%  Similarity=0.194  Sum_probs=67.4

Q ss_pred             cCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhc--------CC-----Ce--eEecCCCccHH
Q 028523           14 CSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKF--------GF-----DE--AFNYKEEPDLD   78 (208)
Q Consensus        14 ~~~~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~--------g~-----~~--v~~~~~~~~~~   78 (208)
                      .+.+.|.+|||+||+|++|..+++.+...|++|++++|+.++.+.+.+.+        |.     ..  ..|..+.    
T Consensus        75 ~~~~~gKvVLVTGATGgIG~aLAr~LLk~G~~Vval~Rn~ekl~~l~~~l~~~~L~~~Ga~~~~~v~iV~gDLtD~----  150 (576)
T PLN03209         75 LDTKDEDLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSAQRAESLVQSVKQMKLDVEGTQPVEKLEIVECDLEKP----  150 (576)
T ss_pred             cccCCCCEEEEECCCCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhhhhccccccccccCceEEEEecCCCH----
Confidence            45568899999999999999999998888999999999988766543221        21     11  2333322    


Q ss_pred             HHHHhHCCCCccEEEeCCCchh----------------HHHHHHhhcc--CCEEEEEeccc
Q 028523           79 AALKRYFPEGINIYFENVGGKM----------------LDAVLLNMRI--QGRITLCGMIS  121 (208)
Q Consensus        79 ~~~~~~~~~~~d~v~d~~g~~~----------------~~~~~~~l~~--~G~~v~~g~~~  121 (208)
                      +.+.+.. +++|+||++.|...                ...+++.+..  .|+||.++...
T Consensus       151 esI~~aL-ggiDiVVn~AG~~~~~v~d~~~~~~VN~~Gt~nLl~Aa~~agVgRIV~VSSig  210 (576)
T PLN03209        151 DQIGPAL-GNASVVICCIGASEKEVFDVTGPYRIDYLATKNLVDAATVAKVNHFILVTSLG  210 (576)
T ss_pred             HHHHHHh-cCCCEEEEccccccccccchhhHHHHHHHHHHHHHHHHHHhCCCEEEEEccch
Confidence            2233322 25999999987320                1223333333  37899988754

>PRK05854 short chain dehydrogenase; Provisional

Probab=98.07  E-value=3.6e-05  Score=59.44  Aligned_cols=80  Identities=16%  Similarity=0.187  Sum_probs=54.5

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhc----C-CC-e--eEecCCCccHHHHHHhHCC--C
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKF----G-FD-E--AFNYKEEPDLDAALKRYFP--E   87 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~----g-~~-~--v~~~~~~~~~~~~~~~~~~--~   87 (208)
                      +|.+++|+||++++|..+++.+...|++|++++++.++.+.+.+++    + .. .  .+|..+..+..+.+.+...  +
T Consensus        13 ~gk~~lITGas~GIG~~~a~~La~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d~~sv~~~~~~~~~~~~   92 (313)
T PRK05854         13 SGKRAVVTGASDGLGLGLARRLAAAGAEVILPVRNRAKGEAAVAAIRTAVPDAKLSLRALDLSSLASVAALGEQLRAEGR   92 (313)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEecCCCHHHHHHHHHHHHHhCC
Confidence            4789999999999999999888888999999999987765443232    1 11 1  2354443233333333222  3


Q ss_pred             CccEEEeCCC
Q 028523           88 GINIYFENVG   97 (208)
Q Consensus        88 ~~d~v~d~~g   97 (208)
                      ++|++|++.|
T Consensus        93 ~iD~li~nAG  102 (313)
T PRK05854         93 PIHLLINNAG  102 (313)
T ss_pred             CccEEEECCc
Confidence            6999999877

>PRK05867 short chain dehydrogenase; Provisional

Probab=98.07  E-value=2.3e-05  Score=58.55  Aligned_cols=80  Identities=21%  Similarity=0.295  Sum_probs=55.7

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhc---CCCe---eEecCCCccHHHHHHhHCC--CCc
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKF---GFDE---AFNYKEEPDLDAALKRYFP--EGI   89 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~---g~~~---v~~~~~~~~~~~~~~~~~~--~~~   89 (208)
                      +|.++||+||++++|...++.+...|++|++++++.++.+.+.+++   +...   ..|..+...+.+.+.+...  +++
T Consensus         8 ~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   87 (253)
T PRK05867          8 HGKRALITGASTGIGKRVALAYVEAGAQVAIAARHLDALEKLADEIGTSGGKVVPVCCDVSQHQQVTSMLDQVTAELGGI   87 (253)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence            4789999999999999999998889999999999888766554333   3211   2344443233333333221  369


Q ss_pred             cEEEeCCC
Q 028523           90 NIYFENVG   97 (208)
Q Consensus        90 d~v~d~~g   97 (208)
                      |+++++.|
T Consensus        88 d~lv~~ag   95 (253)
T PRK05867         88 DIAVCNAG   95 (253)
T ss_pred             CEEEECCC
Confidence            99999877

>KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism]

Probab=98.07  E-value=0.00011  Score=52.50  Aligned_cols=106  Identities=15%  Similarity=0.281  Sum_probs=76.0

Q ss_pred             CCCEEEEec-CCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCC-CeeEecCCCcc---HHHHHHhHCCCCccEE
Q 028523           18 QGEYVFVSA-ASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGF-DEAFNYKEEPD---LDAALKRYFPEGINIY   92 (208)
Q Consensus        18 ~g~~vli~g-a~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~-~~v~~~~~~~~---~~~~~~~~~~~~~d~v   92 (208)
                      ....|||+| ++||+|.+.+.-....|+.|+++.|+-+.+..+..++|. ..-+|.+++++   +...+++...|+.|+.
T Consensus         6 ~~k~VlItgcs~GGIG~ala~ef~~~G~~V~AtaR~~e~M~~L~~~~gl~~~kLDV~~~~~V~~v~~evr~~~~Gkld~L   85 (289)
T KOG1209|consen    6 QPKKVLITGCSSGGIGYALAKEFARNGYLVYATARRLEPMAQLAIQFGLKPYKLDVSKPEEVVTVSGEVRANPDGKLDLL   85 (289)
T ss_pred             CCCeEEEeecCCcchhHHHHHHHHhCCeEEEEEccccchHhhHHHhhCCeeEEeccCChHHHHHHHHHHhhCCCCceEEE
Confidence            346788887 567999998888888999999999999998887767886 34566665423   3334555566689999


Q ss_pred             EeCCCchh-------------------------HHH--HHHhhccCCEEEEEeccccc
Q 028523           93 FENVGGKM-------------------------LDA--VLLNMRIQGRITLCGMISQY  123 (208)
Q Consensus        93 ~d~~g~~~-------------------------~~~--~~~~l~~~G~~v~~g~~~~~  123 (208)
                      ++..|.++                         +..  ...+.+..|++|.+|+..+.
T Consensus        86 ~NNAG~~C~~Pa~d~~i~ave~~f~vNvfG~irM~~a~~h~likaKGtIVnvgSl~~~  143 (289)
T KOG1209|consen   86 YNNAGQSCTFPALDATIAAVEQCFKVNVFGHIRMCRALSHFLIKAKGTIVNVGSLAGV  143 (289)
T ss_pred             EcCCCCCcccccccCCHHHHHhhhccceeeeehHHHHHHHHHHHccceEEEecceeEE
Confidence            99877442                         111  22345678999999887653

>PRK09072 short chain dehydrogenase; Provisional

Probab=98.07  E-value=0.00011  Score=55.27  Aligned_cols=81  Identities=22%  Similarity=0.329  Sum_probs=54.5

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhc--CCC-e--eEecCCCccHHHHHHhHC-CCCccE
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKF--GFD-E--AFNYKEEPDLDAALKRYF-PEGINI   91 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~--g~~-~--v~~~~~~~~~~~~~~~~~-~~~~d~   91 (208)
                      ++.+++|+||+|++|...++.+...|++|+++++++++.+.+.+++  +.. .  ..|..+...+.+.+.... .+++|.
T Consensus         4 ~~~~vlItG~s~~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~id~   83 (263)
T PRK09072          4 KDKRVLLTGASGGIGQALAEALAAAGARLLLVGRNAEKLEALAARLPYPGRHRWVVADLTSEAGREAVLARAREMGGINV   83 (263)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHhcCCCCE
Confidence            4678999999999999999988888999999999988776665343  211 1  233333312222222221 236899


Q ss_pred             EEeCCCc
Q 028523           92 YFENVGG   98 (208)
Q Consensus        92 v~d~~g~   98 (208)
                      ++.+.|.
T Consensus        84 lv~~ag~   90 (263)
T PRK09072         84 LINNAGV   90 (263)
T ss_pred             EEECCCC
Confidence            9998873

>PLN02780 ketoreductase/ oxidoreductase

Probab=98.06  E-value=4.5e-05  Score=59.09  Aligned_cols=80  Identities=15%  Similarity=0.256  Sum_probs=55.1

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhc----CCCe----eEecCCC-ccHHHHHHhHCCC-
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKF----GFDE----AFNYKEE-PDLDAALKRYFPE-   87 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~----g~~~----v~~~~~~-~~~~~~~~~~~~~-   87 (208)
                      .|.+++|+||++++|.+.++.....|++|+.+++++++.+.+.+++    +...    .+|..+. .+..+.+.+..++ 
T Consensus        52 ~g~~~lITGAs~GIG~alA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~l~~~~~~~  131 (320)
T PLN02780         52 YGSWALVTGPTDGIGKGFAFQLARKGLNLVLVARNPDKLKDVSDSIQSKYSKTQIKTVVVDFSGDIDEGVKRIKETIEGL  131 (320)
T ss_pred             cCCEEEEeCCCcHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHCCCcEEEEEEEECCCCcHHHHHHHHHHhcCC
Confidence            5899999999999999988888788999999999998876654332    2111    3454421 1233344444344 


Q ss_pred             CccEEEeCCC
Q 028523           88 GINIYFENVG   97 (208)
Q Consensus        88 ~~d~v~d~~g   97 (208)
                      .+|+++++.|
T Consensus       132 didilVnnAG  141 (320)
T PLN02780        132 DVGVLINNVG  141 (320)
T ss_pred             CccEEEEecC
Confidence            5779999876

>PRK07478 short chain dehydrogenase; Provisional

Probab=98.06  E-value=3.4e-05  Score=57.61  Aligned_cols=80  Identities=24%  Similarity=0.356  Sum_probs=55.0

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhc---CCCe---eEecCCCccHHHHHHhHCC--CCc
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKF---GFDE---AFNYKEEPDLDAALKRYFP--EGI   89 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~---g~~~---v~~~~~~~~~~~~~~~~~~--~~~   89 (208)
                      ++.+++|+||++++|...++.+...|++|+.+++++++.+.+.+++   +...   ..|..+.+.....+.+...  +++
T Consensus         5 ~~k~~lItGas~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   84 (254)
T PRK07478          5 NGKVAIITGASSGIGRAAAKLFAREGAKVVVGARRQAELDQLVAEIRAEGGEAVALAGDVRDEAYAKALVALAVERFGGL   84 (254)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHhcCCC
Confidence            4678999999999999999988889999999999988766554333   3221   2344433223333333222  269


Q ss_pred             cEEEeCCC
Q 028523           90 NIYFENVG   97 (208)
Q Consensus        90 d~v~d~~g   97 (208)
                      |++|++.|
T Consensus        85 d~li~~ag   92 (254)
T PRK07478         85 DIAFNNAG   92 (254)
T ss_pred             CEEEECCC
Confidence            99999887

>PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related

Probab=98.06  E-value=6e-05  Score=53.30  Aligned_cols=89  Identities=21%  Similarity=0.265  Sum_probs=65.6

Q ss_pred             CCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHHHHhHCCCCccEEEeCC
Q 028523           17 KQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENV   96 (208)
Q Consensus        17 ~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~d~v~d~~   96 (208)
                      -.|.+|.|+| .|.+|+..+++++.+|++|++.+++........ ..+.    .+.   ++.+.+.+     .|+|+.+.
T Consensus        34 l~g~tvgIiG-~G~IG~~vA~~l~~fG~~V~~~d~~~~~~~~~~-~~~~----~~~---~l~ell~~-----aDiv~~~~   99 (178)
T PF02826_consen   34 LRGKTVGIIG-YGRIGRAVARRLKAFGMRVIGYDRSPKPEEGAD-EFGV----EYV---SLDELLAQ-----ADIVSLHL   99 (178)
T ss_dssp             STTSEEEEES-TSHHHHHHHHHHHHTT-EEEEEESSCHHHHHHH-HTTE----EES---SHHHHHHH------SEEEE-S
T ss_pred             cCCCEEEEEE-EcCCcCeEeeeeecCCceeEEecccCChhhhcc-cccc----eee---ehhhhcch-----hhhhhhhh
Confidence            4689999999 599999999999999999999998888766444 4443    121   45555554     79999987


Q ss_pred             C-ch-----hHHHHHHhhccCCEEEEEec
Q 028523           97 G-GK-----MLDAVLLNMRIQGRITLCGM  119 (208)
Q Consensus        97 g-~~-----~~~~~~~~l~~~G~~v~~g~  119 (208)
                      . .+     .-...+..|+++..+|.++.
T Consensus       100 plt~~T~~li~~~~l~~mk~ga~lvN~aR  128 (178)
T PF02826_consen  100 PLTPETRGLINAEFLAKMKPGAVLVNVAR  128 (178)
T ss_dssp             SSSTTTTTSBSHHHHHTSTTTEEEEESSS
T ss_pred             ccccccceeeeeeeeeccccceEEEeccc
Confidence            7 33     24678889999999888765

All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A ....

>PRK08177 short chain dehydrogenase; Provisional

Probab=98.05  E-value=3.4e-05  Score=56.60  Aligned_cols=77  Identities=17%  Similarity=0.194  Sum_probs=54.4

Q ss_pred             CEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCe--eEecCCCccHHHHHHhHCCCCccEEEeCCC
Q 028523           20 EYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDE--AFNYKEEPDLDAALKRYFPEGINIYFENVG   97 (208)
Q Consensus        20 ~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~--v~~~~~~~~~~~~~~~~~~~~~d~v~d~~g   97 (208)
                      .+++|+|++|++|...++.+...|++|+++++++++.+.+. +++...  .+|..+.+.+.+.+.....+++|++|.+.|
T Consensus         2 k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~-~~~~~~~~~~D~~d~~~~~~~~~~~~~~~id~vi~~ag   80 (225)
T PRK08177          2 RTALIIGASRGLGLGLVDRLLERGWQVTATVRGPQQDTALQ-ALPGVHIEKLDMNDPASLDQLLQRLQGQRFDLLFVNAG   80 (225)
T ss_pred             CEEEEeCCCchHHHHHHHHHHhCCCEEEEEeCCCcchHHHH-hccccceEEcCCCCHHHHHHHHHHhhcCCCCEEEEcCc
Confidence            46999999999999999888888999999999887766665 443222  344444323333344443347999998876

>PRK06180 short chain dehydrogenase; Provisional

Probab=98.05  E-value=3.6e-05  Score=58.33  Aligned_cols=81  Identities=17%  Similarity=0.156  Sum_probs=55.8

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCC-e--eEecCCCccHHHHHHhHCC--CCccEE
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFD-E--AFNYKEEPDLDAALKRYFP--EGINIY   92 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~-~--v~~~~~~~~~~~~~~~~~~--~~~d~v   92 (208)
                      .+.+++|+||+|++|...++.+...|++|+++++++++.+.+.+..+.. .  ..|..+.+.+...+.....  +++|++
T Consensus         3 ~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~~~d~v   82 (277)
T PRK06180          3 SMKTWLITGVSSGFGRALAQAALAAGHRVVGTVRSEAARADFEALHPDRALARLLDVTDFDAIDAVVADAEATFGPIDVL   82 (277)
T ss_pred             CCCEEEEecCCChHHHHHHHHHHhCcCEEEEEeCCHHHHHHHHhhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCCCCEE
Confidence            3578999999999999999988888999999999988877666333321 1  2344443223333333221  268999


Q ss_pred             EeCCCc
Q 028523           93 FENVGG   98 (208)
Q Consensus        93 ~d~~g~   98 (208)
                      +++.|.
T Consensus        83 v~~ag~   88 (277)
T PRK06180         83 VNNAGY   88 (277)
T ss_pred             EECCCc
Confidence            999873

>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional

Probab=98.04  E-value=0.00012  Score=54.74  Aligned_cols=80  Identities=23%  Similarity=0.234  Sum_probs=52.5

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH--hcCCCe---eEecCCCccHHHHHHhHCC--CCcc
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKN--KFGFDE---AFNYKEEPDLDAALKRYFP--EGIN   90 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~--~~g~~~---v~~~~~~~~~~~~~~~~~~--~~~d   90 (208)
                      ++.+++|+||+|++|...++.+...|++|+++++++...+...+  ..+...   ..|..+..+..+.+.+...  +++|
T Consensus         7 ~~k~vlVtGas~gIG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   86 (260)
T PRK12823          7 AGKVVVVTGAAQGIGRGVALRAAAEGARVVLVDRSELVHEVAAELRAAGGEALALTADLETYAGAQAAMAAAVEAFGRID   86 (260)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCchHHHHHHHHHHhcCCeEEEEEEeCCCHHHHHHHHHHHHHHcCCCe
Confidence            46889999999999999999888899999999987543222220  223321   3455543233333333322  3699


Q ss_pred             EEEeCCC
Q 028523           91 IYFENVG   97 (208)
Q Consensus        91 ~v~d~~g   97 (208)
                      +++.+.|
T Consensus        87 ~lv~nAg   93 (260)
T PRK12823         87 VLINNVG   93 (260)
T ss_pred             EEEECCc
Confidence            9999886

>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional

Probab=98.04  E-value=0.00011  Score=54.90  Aligned_cols=80  Identities=19%  Similarity=0.278  Sum_probs=54.0

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhc---CCC-e--eEecCCCccHHHHHHhHC--CCCc
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKF---GFD-E--AFNYKEEPDLDAALKRYF--PEGI   89 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~---g~~-~--v~~~~~~~~~~~~~~~~~--~~~~   89 (208)
                      ++.+++|+|++|++|...++.....|++|+++++++++.+.+.+++   +.. .  ..|..+...+.+.+....  .+++
T Consensus         3 ~~~~vlItG~sg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~   82 (258)
T PRK12429          3 KGKVALVTGAASGIGLEIALALAKEGAKVVIADLNDEAAAAAAEALQKAGGKAIGVAMDVTDEEAINAGIDYAVETFGGV   82 (258)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            4678999999999999999888888999999999888765543233   322 1  234444322333333322  1269


Q ss_pred             cEEEeCCC
Q 028523           90 NIYFENVG   97 (208)
Q Consensus        90 d~v~d~~g   97 (208)
                      |++|.+.+
T Consensus        83 d~vi~~a~   90 (258)
T PRK12429         83 DILVNNAG   90 (258)
T ss_pred             CEEEECCC
Confidence            99999886

>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=98.04  E-value=3e-05  Score=57.63  Aligned_cols=81  Identities=20%  Similarity=0.277  Sum_probs=55.2

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcC--CC---eeEecCCCccHHHHHHhHC--CCCcc
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFG--FD---EAFNYKEEPDLDAALKRYF--PEGIN   90 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g--~~---~v~~~~~~~~~~~~~~~~~--~~~~d   90 (208)
                      ++.++||+||+|++|..+++.+...|++|+++++++++.+.+.+.+.  ..   ...|..+...+...+.+..  .+++|
T Consensus         4 ~~~~vlItGasg~iG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d   83 (251)
T PRK07231          4 EGKVAIVTGASSGIGEGIARRFAAEGARVVVTDRNEEAAERVAAEILAGGRAIAVAADVSDEADVEAAVAAALERFGSVD   83 (251)
T ss_pred             CCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCCCC
Confidence            46789999999999999998888889999999999887666543443  11   1234343323333333321  12689


Q ss_pred             EEEeCCCc
Q 028523           91 IYFENVGG   98 (208)
Q Consensus        91 ~v~d~~g~   98 (208)
                      .+|.+.|.
T Consensus        84 ~vi~~ag~   91 (251)
T PRK07231         84 ILVNNAGT   91 (251)
T ss_pred             EEEECCCC
Confidence            99998873

>PRK06914 short chain dehydrogenase; Provisional

Probab=98.04  E-value=8.6e-05  Score=56.26  Aligned_cols=79  Identities=15%  Similarity=0.286  Sum_probs=53.6

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHh---cCCC---e--eEecCCCccHHHHHHhHCC--C
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNK---FGFD---E--AFNYKEEPDLDAALKRYFP--E   87 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~---~g~~---~--v~~~~~~~~~~~~~~~~~~--~   87 (208)
                      .+.++||+||+|++|...++.+...|++|++++++++..+.+.+.   .+..   .  ..|..+..++.. +.+...  +
T Consensus         2 ~~k~~lItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~-~~~~~~~~~   80 (280)
T PRK06914          2 NKKIAIVTGASSGFGLLTTLELAKKGYLVIATMRNPEKQENLLSQATQLNLQQNIKVQQLDVTDQNSIHN-FQLVLKEIG   80 (280)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceeEEecCCCCHHHHHH-HHHHHHhcC
Confidence            356899999999999999988888899999999888766554322   2211   1  235544323333 433322  3


Q ss_pred             CccEEEeCCC
Q 028523           88 GINIYFENVG   97 (208)
Q Consensus        88 ~~d~v~d~~g   97 (208)
                      ++|+++.+.|
T Consensus        81 ~id~vv~~ag   90 (280)
T PRK06914         81 RIDLLVNNAG   90 (280)
T ss_pred             CeeEEEECCc
Confidence            6899999876

>PRK07814 short chain dehydrogenase; Provisional

Probab=98.03  E-value=4.1e-05  Score=57.53  Aligned_cols=80  Identities=16%  Similarity=0.215  Sum_probs=54.9

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhc---CCC-e--eEecCCCccHHHHHHhHCC--CCc
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKF---GFD-E--AFNYKEEPDLDAALKRYFP--EGI   89 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~---g~~-~--v~~~~~~~~~~~~~~~~~~--~~~   89 (208)
                      ++.++||+||+|++|...++.+...|++|+++++++++.+.+.+.+   +.. .  ..|..+...+...+.+...  +++
T Consensus         9 ~~~~vlItGasggIG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   88 (263)
T PRK07814          9 DDQVAVVTGAGRGLGAAIALAFAEAGADVLIAARTESQLDEVAEQIRAAGRRAHVVAADLAHPEATAGLAGQAVEAFGRL   88 (263)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            5789999999999999999998889999999999887765544232   322 1  2444443223322333211  369


Q ss_pred             cEEEeCCC
Q 028523           90 NIYFENVG   97 (208)
Q Consensus        90 d~v~d~~g   97 (208)
                      |++|++.|
T Consensus        89 d~vi~~Ag   96 (263)
T PRK07814         89 DIVVNNVG   96 (263)
T ss_pred             CEEEECCC
Confidence            99999887

>PRK06949 short chain dehydrogenase; Provisional

Probab=98.03  E-value=3.5e-05  Score=57.57  Aligned_cols=81  Identities=21%  Similarity=0.310  Sum_probs=55.8

Q ss_pred             CCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhc---CC-Ce--eEecCCCccHHHHHHhHC--CCC
Q 028523           17 KQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKF---GF-DE--AFNYKEEPDLDAALKRYF--PEG   88 (208)
Q Consensus        17 ~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~---g~-~~--v~~~~~~~~~~~~~~~~~--~~~   88 (208)
                      ..+.+++|+||+|++|..+++.+...|++|+++++++++.+.+.+.+   +. ..  ..|..+..++.+.+.+..  .++
T Consensus         7 ~~~k~ilItGasg~IG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   86 (258)
T PRK06949          7 LEGKVALVTGASSGLGARFAQVLAQAGAKVVLASRRVERLKELRAEIEAEGGAAHVVSLDVTDYQSIKAAVAHAETEAGT   86 (258)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHhcCC
Confidence            35789999999999999999999889999999999988776554332   21 12  234443323333333221  236


Q ss_pred             ccEEEeCCC
Q 028523           89 INIYFENVG   97 (208)
Q Consensus        89 ~d~v~d~~g   97 (208)
                      +|++|++.|
T Consensus        87 ~d~li~~ag   95 (258)
T PRK06949         87 IDILVNNSG   95 (258)
T ss_pred             CCEEEECCC
Confidence            899999887

>PRK09186 flagellin modification protein A; Provisional

Probab=98.02  E-value=3.8e-05  Score=57.37  Aligned_cols=80  Identities=14%  Similarity=0.215  Sum_probs=55.6

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhc----CCCe----eEecCCCccHHHHHHhHCC--C
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKF----GFDE----AFNYKEEPDLDAALKRYFP--E   87 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~----g~~~----v~~~~~~~~~~~~~~~~~~--~   87 (208)
                      ++.+++|+||+|++|...+..+...|++|+++++++++.+.+.+++    +...    ..|..+...+.+.+.+...  +
T Consensus         3 ~~k~vlItGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~   82 (256)
T PRK09186          3 KGKTILITGAGGLIGSALVKAILEAGGIVIAADIDKEALNELLESLGKEFKSKKLSLVELDITDQESLEEFLSKSAEKYG   82 (256)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecChHHHHHHHHHHHhhcCCCceeEEEecCCCHHHHHHHHHHHHHHcC
Confidence            5789999999999999999988889999999999888766554343    2211    2355443234343443322  3


Q ss_pred             CccEEEeCCC
Q 028523           88 GINIYFENVG   97 (208)
Q Consensus        88 ~~d~v~d~~g   97 (208)
                      ++|+++++.+
T Consensus        83 ~id~vi~~A~   92 (256)
T PRK09186         83 KIDGAVNCAY   92 (256)
T ss_pred             CccEEEECCc
Confidence            6899999875

>PRK07831 short chain dehydrogenase; Provisional

Probab=98.02  E-value=5.1e-05  Score=56.97  Aligned_cols=82  Identities=22%  Similarity=0.319  Sum_probs=55.7

Q ss_pred             CCCCCEEEEecCCc-hHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHh----cCCCee----EecCCCccHHHHHHhHC-
Q 028523           16 PKQGEYVFVSAASG-AVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNK----FGFDEA----FNYKEEPDLDAALKRYF-   85 (208)
Q Consensus        16 ~~~g~~vli~ga~g-~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~----~g~~~v----~~~~~~~~~~~~~~~~~-   85 (208)
                      +.++.+++|+||+| ++|.++++.+...|++|+++++++++.+...++    +|...+    .|..+.+.+...+.... 
T Consensus        14 ~~~~k~vlItG~sg~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~   93 (262)
T PRK07831         14 LLAGKVVLVTAAAGTGIGSATARRALEEGARVVISDIHERRLGETADELAAELGLGRVEAVVCDVTSEAQVDALIDAAVE   93 (262)
T ss_pred             ccCCCEEEEECCCcccHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEEccCCCHHHHHHHHHHHHH
Confidence            45678999999986 899999999999999999999887766544322    443222    34444322333333221 


Q ss_pred             -CCCccEEEeCCC
Q 028523           86 -PEGINIYFENVG   97 (208)
Q Consensus        86 -~~~~d~v~d~~g   97 (208)
                       .+++|++|++.|
T Consensus        94 ~~g~id~li~~ag  106 (262)
T PRK07831         94 RLGRLDVLVNNAG  106 (262)
T ss_pred             HcCCCCEEEECCC
Confidence             136999999988

>PRK00045 hemA glutamyl-tRNA reductase; Reviewed

Probab=98.01  E-value=5e-05  Score=61.05  Aligned_cols=88  Identities=23%  Similarity=0.287  Sum_probs=62.0

Q ss_pred             chhhHHHHHHHhcC---CCCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHhcCCCeeEecCCCccH
Q 028523            2 PGMTAYAGFFEVCS---PKQGEYVFVSAASGAVGQLVGQFAKLVGC-YVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDL   77 (208)
Q Consensus         2 ~~~tA~~~l~~~~~---~~~g~~vli~ga~g~vG~~a~qla~~~g~-~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~   77 (208)
                      +..+++.++.....   -.++.+|+|+|+ |.+|..+++.++..|+ +|+++.++.++.+.+.+.+|.+ ++++.   +.
T Consensus       162 ~~Sv~~~Av~~a~~~~~~~~~~~vlViGa-G~iG~~~a~~L~~~G~~~V~v~~r~~~ra~~la~~~g~~-~~~~~---~~  236 (423)
T PRK00045        162 AVSVASAAVELAKQIFGDLSGKKVLVIGA-GEMGELVAKHLAEKGVRKITVANRTLERAEELAEEFGGE-AIPLD---EL  236 (423)
T ss_pred             CcCHHHHHHHHHHHhhCCccCCEEEEECc-hHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHcCCc-EeeHH---HH
Confidence            34566777743322   257899999995 9999999999999998 8999999988876554478753 33321   22


Q ss_pred             HHHHHhHCCCCccEEEeCCCch
Q 028523           78 DAALKRYFPEGINIYFENVGGK   99 (208)
Q Consensus        78 ~~~~~~~~~~~~d~v~d~~g~~   99 (208)
                      .+.+.     ++|+||+|++++
T Consensus       237 ~~~l~-----~aDvVI~aT~s~  253 (423)
T PRK00045        237 PEALA-----EADIVISSTGAP  253 (423)
T ss_pred             HHHhc-----cCCEEEECCCCC
Confidence            22221     589999999853

>PRK07890 short chain dehydrogenase; Provisional

Probab=98.01  E-value=3.4e-05  Score=57.68  Aligned_cols=81  Identities=17%  Similarity=0.203  Sum_probs=55.4

Q ss_pred             CCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhc---CCC---eeEecCCCccHHHHHHhHCC--CC
Q 028523           17 KQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKF---GFD---EAFNYKEEPDLDAALKRYFP--EG   88 (208)
Q Consensus        17 ~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~---g~~---~v~~~~~~~~~~~~~~~~~~--~~   88 (208)
                      -.+.+++|+||+|++|...++.+...|++|+++++++++.+.+.+++   +..   ...|..+...+...+.+...  ++
T Consensus         3 l~~k~vlItGa~~~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   82 (258)
T PRK07890          3 LKGKVVVVSGVGPGLGRTLAVRAARAGADVVLAARTAERLDEVAAEIDDLGRRALAVPTDITDEDQCANLVALALERFGR   82 (258)
T ss_pred             cCCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHhCCceEEEecCCCCHHHHHHHHHHHHHHcCC
Confidence            35788999999999999999988899999999999887765554333   221   13444433233333333221  36


Q ss_pred             ccEEEeCCC
Q 028523           89 INIYFENVG   97 (208)
Q Consensus        89 ~d~v~d~~g   97 (208)
                      +|++|.+.|
T Consensus        83 ~d~vi~~ag   91 (258)
T PRK07890         83 VDALVNNAF   91 (258)
T ss_pred             ccEEEECCc
Confidence            899999886

>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional

Probab=98.01  E-value=0.00014  Score=54.51  Aligned_cols=104  Identities=11%  Similarity=0.083  Sum_probs=66.6

Q ss_pred             CCCEEEEecCC--chHHHHHHHHHHHcCCEEEEEeCCHHH---HHHHHHhcCCCee--EecCCCccHHHHHHhHCC--CC
Q 028523           18 QGEYVFVSAAS--GAVGQLVGQFAKLVGCYVVGSAGSKDK---VDLLKNKFGFDEA--FNYKEEPDLDAALKRYFP--EG   88 (208)
Q Consensus        18 ~g~~vli~ga~--g~vG~~a~qla~~~g~~v~~~~~s~~~---~~~~~~~~g~~~v--~~~~~~~~~~~~~~~~~~--~~   88 (208)
                      +|.+++|+||+  +++|.+.++.+...|++|+++.++++.   .+.+.++++....  .|..+..+..+.+.....  ++
T Consensus         9 ~~k~~lItGas~g~GIG~a~a~~la~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~   88 (258)
T PRK07533          9 AGKRGLVVGIANEQSIAWGCARAFRALGAELAVTYLNDKARPYVEPLAEELDAPIFLPLDVREPGQLEAVFARIAEEWGR   88 (258)
T ss_pred             CCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHHHhhccceEEecCcCCHHHHHHHHHHHHHHcCC
Confidence            57899999998  499999999888899999999887543   2333324443222  344433233333333322  36


Q ss_pred             ccEEEeCCCc-h--------------h---------------HHHHHHhhccCCEEEEEeccc
Q 028523           89 INIYFENVGG-K--------------M---------------LDAVLLNMRIQGRITLCGMIS  121 (208)
Q Consensus        89 ~d~v~d~~g~-~--------------~---------------~~~~~~~l~~~G~~v~~g~~~  121 (208)
                      +|+++++.|. .              .               .+.+++.|+.+|+++.++...
T Consensus        89 ld~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~~g~Ii~iss~~  151 (258)
T PRK07533         89 LDFLLHSIAFAPKEDLHGRVVDCSREGFALAMDVSCHSFIRMARLAEPLMTNGGSLLTMSYYG  151 (258)
T ss_pred             CCEEEEcCccCCcccccCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhccCCEEEEEeccc
Confidence            9999998862 1              0               234566676778988877644

>PRK06128 oxidoreductase; Provisional

Probab=98.01  E-value=0.0001  Score=56.53  Aligned_cols=104  Identities=16%  Similarity=0.211  Sum_probs=65.1

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHH--HHH----HHHHhcCCCe---eEecCCCccHHHHHHhHCC--
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKD--KVD----LLKNKFGFDE---AFNYKEEPDLDAALKRYFP--   86 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~--~~~----~~~~~~g~~~---v~~~~~~~~~~~~~~~~~~--   86 (208)
                      .+.++||+||++++|...++.+...|++|+++.++.+  +.+    .++ ..|...   ..|..+...+.+.+.+...  
T Consensus        54 ~~k~vlITGas~gIG~~~a~~l~~~G~~V~i~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  132 (300)
T PRK06128         54 QGRKALITGADSGIGRATAIAFAREGADIALNYLPEEEQDAAEVVQLIQ-AEGRKAVALPGDLKDEAFCRQLVERAVKEL  132 (300)
T ss_pred             CCCEEEEecCCCcHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHH-HcCCeEEEEecCCCCHHHHHHHHHHHHHHh
Confidence            4679999999999999999888889999988875432  222    222 334322   2344443223333333222  


Q ss_pred             CCccEEEeCCCc-h--------------------------hHHHHHHhhccCCEEEEEecccc
Q 028523           87 EGINIYFENVGG-K--------------------------MLDAVLLNMRIQGRITLCGMISQ  122 (208)
Q Consensus        87 ~~~d~v~d~~g~-~--------------------------~~~~~~~~l~~~G~~v~~g~~~~  122 (208)
                      +++|++|++.|. .                          ..+.+++.|.++|+++.++....
T Consensus       133 g~iD~lV~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~iv~~sS~~~  195 (300)
T PRK06128        133 GGLDILVNIAGKQTAVKDIADITTEQFDATFKTNVYAMFWLCKAAIPHLPPGASIINTGSIQS  195 (300)
T ss_pred             CCCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhcCcCCEEEEECCccc
Confidence            369999998872 1                          12334455667889998877554

>PRK05717 oxidoreductase; Validated

Probab=98.00  E-value=5e-05  Score=56.79  Aligned_cols=80  Identities=15%  Similarity=0.244  Sum_probs=54.9

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCe---eEecCCCccHHHHHHhHCC--CCccEE
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDE---AFNYKEEPDLDAALKRYFP--EGINIY   92 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~---v~~~~~~~~~~~~~~~~~~--~~~d~v   92 (208)
                      .|.+++|+||+|++|..+++.+...|++|+.++++.++.+.+.++++...   ..|..+...+.+.+.+...  +++|++
T Consensus         9 ~~k~vlItG~sg~IG~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~l   88 (255)
T PRK05717          9 NGRVALVTGAARGIGLGIAAWLIAEGWQVVLADLDRERGSKVAKALGENAWFIAMDVADEAQVAAGVAEVLGQFGRLDAL   88 (255)
T ss_pred             CCCEEEEeCCcchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHcCCceEEEEccCCCHHHHHHHHHHHHHHhCCCCEE
Confidence            47889999999999999998888889999999888766555443555321   3344443233333333322  258999


Q ss_pred             EeCCC
Q 028523           93 FENVG   97 (208)
Q Consensus        93 ~d~~g   97 (208)
                      |.+.|
T Consensus        89 i~~ag   93 (255)
T PRK05717         89 VCNAA   93 (255)
T ss_pred             EECCC
Confidence            99887

>PRK07453 protochlorophyllide oxidoreductase; Validated

Probab=98.00  E-value=5.2e-05  Score=58.77  Aligned_cols=80  Identities=13%  Similarity=0.177  Sum_probs=55.3

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCC---C-e--eEecCCCccHHHHHHhHC--CCCc
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGF---D-E--AFNYKEEPDLDAALKRYF--PEGI   89 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~---~-~--v~~~~~~~~~~~~~~~~~--~~~~   89 (208)
                      .+.+++|+||+|++|...++.+...|++|++++++.++.+.+.++++.   . .  ..|..+...+.+.+.+..  .+++
T Consensus         5 ~~k~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~i   84 (322)
T PRK07453          5 AKGTVIITGASSGVGLYAAKALAKRGWHVIMACRNLKKAEAAAQELGIPPDSYTIIHIDLGDLDSVRRFVDDFRALGKPL   84 (322)
T ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhccCCceEEEEecCCCHHHHHHHHHHHHHhCCCc
Confidence            467899999999999999988888899999999998876665545432   1 1  234444322333333321  2369


Q ss_pred             cEEEeCCC
Q 028523           90 NIYFENVG   97 (208)
Q Consensus        90 d~v~d~~g   97 (208)
                      |++|++.|
T Consensus        85 D~li~nAg   92 (322)
T PRK07453         85 DALVCNAA   92 (322)
T ss_pred             cEEEECCc
Confidence            99999887

>COG2518 Pcm Protein-L-isoaspartate carboxylmethyltransferase [Posttranslational modification, protein turnover, chaperones]

Probab=97.98  E-value=0.00011  Score=52.53  Aligned_cols=99  Identities=17%  Similarity=0.249  Sum_probs=70.8

Q ss_pred             HhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH---hcCCCee-EecCCCccHHHHHHhHCCC
Q 028523           12 EVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKN---KFGFDEA-FNYKEEPDLDAALKRYFPE   87 (208)
Q Consensus        12 ~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~---~~g~~~v-~~~~~~~~~~~~~~~~~~~   87 (208)
                      ....+++|++||=.|  +|+|..++-+++..| +|+.+.+.++=.+.+++   .+|...| +...+.      ..-+...
T Consensus        66 ~~L~~~~g~~VLEIG--tGsGY~aAvla~l~~-~V~siEr~~~L~~~A~~~L~~lg~~nV~v~~gDG------~~G~~~~  136 (209)
T COG2518          66 QLLELKPGDRVLEIG--TGSGYQAAVLARLVG-RVVSIERIEELAEQARRNLETLGYENVTVRHGDG------SKGWPEE  136 (209)
T ss_pred             HHhCCCCCCeEEEEC--CCchHHHHHHHHHhC-eEEEEEEcHHHHHHHHHHHHHcCCCceEEEECCc------ccCCCCC
Confidence            556899999999998  577999999999988 99999988774444432   6777443 222221      1111222


Q ss_pred             -CccEEEeCCCchhH-HHHHHhhccCCEEEEEec
Q 028523           88 -GINIYFENVGGKML-DAVLLNMRIQGRITLCGM  119 (208)
Q Consensus        88 -~~d~v~d~~g~~~~-~~~~~~l~~~G~~v~~g~  119 (208)
                       +||.|+-+.+.+.. ...++.|++||+++..-.
T Consensus       137 aPyD~I~Vtaaa~~vP~~Ll~QL~~gGrlv~PvG  170 (209)
T COG2518         137 APYDRIIVTAAAPEVPEALLDQLKPGGRLVIPVG  170 (209)
T ss_pred             CCcCEEEEeeccCCCCHHHHHhcccCCEEEEEEc
Confidence             79999988886544 678899999999887654

>PRK06841 short chain dehydrogenase; Provisional

Probab=97.98  E-value=5.3e-05  Score=56.56  Aligned_cols=79  Identities=15%  Similarity=0.267  Sum_probs=53.2

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCe----eEecCCCccHHHHHHhHCC--CCccE
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDE----AFNYKEEPDLDAALKRYFP--EGINI   91 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~----v~~~~~~~~~~~~~~~~~~--~~~d~   91 (208)
                      ++.++||+||+|++|...++.+...|++|+.++++++..+... ++....    ..|..+..++...+.+...  +++|.
T Consensus        14 ~~k~vlItGas~~IG~~la~~l~~~G~~Vi~~~r~~~~~~~~~-~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~d~   92 (255)
T PRK06841         14 SGKVAVVTGGASGIGHAIAELFAAKGARVALLDRSEDVAEVAA-QLLGGNAKGLVCDVSDSQSVEAAVAAVISAFGRIDI   92 (255)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HhhCCceEEEEecCCCHHHHHHHHHHHHHHhCCCCE
Confidence            4789999999999999999888889999999998876554444 332211    2343333123333332211  26899


Q ss_pred             EEeCCC
Q 028523           92 YFENVG   97 (208)
Q Consensus        92 v~d~~g   97 (208)
                      ++.+.|
T Consensus        93 vi~~ag   98 (255)
T PRK06841         93 LVNSAG   98 (255)
T ss_pred             EEECCC
Confidence            999887

>PRK05876 short chain dehydrogenase; Provisional

Probab=97.98  E-value=4.1e-05  Score=58.03  Aligned_cols=80  Identities=19%  Similarity=0.297  Sum_probs=54.5

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhc---CCCe---eEecCCCccHHHHHHhHCC--CCc
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKF---GFDE---AFNYKEEPDLDAALKRYFP--EGI   89 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~---g~~~---v~~~~~~~~~~~~~~~~~~--~~~   89 (208)
                      .+.+++|+||+|++|...++.+...|++|+++++++++.+.+.+++   |...   ..|..+..++.+.+.+...  +++
T Consensus         5 ~~k~vlVTGas~gIG~ala~~La~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i   84 (275)
T PRK05876          5 PGRGAVITGGASGIGLATGTEFARRGARVVLGDVDKPGLRQAVNHLRAEGFDVHGVMCDVRHREEVTHLADEAFRLLGHV   84 (275)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHHHcCCC
Confidence            4788999999999999999988889999999998887665543333   3321   2344443233333333211  368


Q ss_pred             cEEEeCCC
Q 028523           90 NIYFENVG   97 (208)
Q Consensus        90 d~v~d~~g   97 (208)
                      |++|++.|
T Consensus        85 d~li~nAg   92 (275)
T PRK05876         85 DVVFSNAG   92 (275)
T ss_pred             CEEEECCC
Confidence            99999887

>PRK07523 gluconate 5-dehydrogenase; Provisional

Probab=97.98  E-value=5.4e-05  Score=56.58  Aligned_cols=80  Identities=20%  Similarity=0.327  Sum_probs=54.4

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhc---CCCe---eEecCCCccHHHHHHhHC--CCCc
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKF---GFDE---AFNYKEEPDLDAALKRYF--PEGI   89 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~---g~~~---v~~~~~~~~~~~~~~~~~--~~~~   89 (208)
                      ++.++||+||+|++|...++.+...|++|+++++++++.+.+.+++   |...   ..|..+...+...+.+..  -+++
T Consensus         9 ~~k~vlItGa~g~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   88 (255)
T PRK07523          9 TGRRALVTGSSQGIGYALAEGLAQAGAEVILNGRDPAKLAAAAESLKGQGLSAHALAFDVTDHDAVRAAIDAFEAEIGPI   88 (255)
T ss_pred             CCCEEEEECCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCceEEEEEccCCCHHHHHHHHHHHHHhcCCC
Confidence            5789999999999999999988888999999998887655443233   3211   234444323333333322  1368


Q ss_pred             cEEEeCCC
Q 028523           90 NIYFENVG   97 (208)
Q Consensus        90 d~v~d~~g   97 (208)
                      |++|.+.|
T Consensus        89 d~li~~ag   96 (255)
T PRK07523         89 DILVNNAG   96 (255)
T ss_pred             CEEEECCC
Confidence            99999887

>PLN02253 xanthoxin dehydrogenase

Probab=97.97  E-value=6.9e-05  Score=56.83  Aligned_cols=80  Identities=16%  Similarity=0.189  Sum_probs=54.7

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCC--C-e--eEecCCCccHHHHHHhHCC--CCcc
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGF--D-E--AFNYKEEPDLDAALKRYFP--EGIN   90 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~--~-~--v~~~~~~~~~~~~~~~~~~--~~~d   90 (208)
                      .+.+++|+||+|++|.+.++.+...|++|++++++++..+.+.++++.  . .  ..|..+.+.+.+.+.....  +++|
T Consensus        17 ~~k~~lItGas~gIG~~la~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~g~id   96 (280)
T PLN02253         17 LGKVALVTGGATGIGESIVRLFHKHGAKVCIVDLQDDLGQNVCDSLGGEPNVCFFHCDVTVEDDVSRAVDFTVDKFGTLD   96 (280)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhcCCCceEEEEeecCCHHHHHHHHHHHHHHhCCCC
Confidence            468899999999999999988888899999999887765555434432  1 1  2455443233333333222  3699


Q ss_pred             EEEeCCC
Q 028523           91 IYFENVG   97 (208)
Q Consensus        91 ~v~d~~g   97 (208)
                      ++|++.|
T Consensus        97 ~li~~Ag  103 (280)
T PLN02253         97 IMVNNAG  103 (280)
T ss_pred             EEEECCC
Confidence            9999886

>PRK00377 cbiT cobalt-precorrin-6Y C(15)-methyltransferase; Provisional

Probab=97.96  E-value=0.00028  Score=50.78  Aligned_cols=100  Identities=20%  Similarity=0.318  Sum_probs=68.1

Q ss_pred             HhcCCCCCCEEEEecCCchHHHHHHHHHHHcC--CEEEEEeCCHHHHHHHHH---hcCC-CeeEecCCCccHHHHHHhHC
Q 028523           12 EVCSPKQGEYVFVSAASGAVGQLVGQFAKLVG--CYVVGSAGSKDKVDLLKN---KFGF-DEAFNYKEEPDLDAALKRYF   85 (208)
Q Consensus        12 ~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g--~~v~~~~~s~~~~~~~~~---~~g~-~~v~~~~~~~~~~~~~~~~~   85 (208)
                      ....+.++++|+-.|+ |+ |..++++++..+  .+|++++.+++..+.+++   .+|. +.+-... . +..+.+.. .
T Consensus        34 ~~l~~~~~~~vlDlG~-Gt-G~~s~~~a~~~~~~~~v~avD~~~~~~~~a~~n~~~~g~~~~v~~~~-~-d~~~~l~~-~  108 (198)
T PRK00377         34 SKLRLRKGDMILDIGC-GT-GSVTVEASLLVGETGKVYAVDKDEKAINLTRRNAEKFGVLNNIVLIK-G-EAPEILFT-I  108 (198)
T ss_pred             HHcCCCCcCEEEEeCC-cC-CHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHhCCCCCeEEEE-e-chhhhHhh-c
Confidence            3457889999999995 54 999999998764  489999999988776653   4562 3221111 1 33332322 2


Q ss_pred             CCCccEEEeCCCc----hhHHHHHHhhccCCEEEE
Q 028523           86 PEGINIYFENVGG----KMLDAVLLNMRIQGRITL  116 (208)
Q Consensus        86 ~~~~d~v~d~~g~----~~~~~~~~~l~~~G~~v~  116 (208)
                      .+.+|.||...+.    ..+..+.+.|+++|+++.
T Consensus       109 ~~~~D~V~~~~~~~~~~~~l~~~~~~LkpgG~lv~  143 (198)
T PRK00377        109 NEKFDRIFIGGGSEKLKEIISASWEIIKKGGRIVI  143 (198)
T ss_pred             CCCCCEEEECCCcccHHHHHHHHHHHcCCCcEEEE
Confidence            2369999985542    367788889999999875

>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=97.96  E-value=7.3e-05  Score=55.61  Aligned_cols=80  Identities=15%  Similarity=0.286  Sum_probs=54.0

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHh---cCCCe---eEecCCCccHHHHHHhHCC--CCc
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNK---FGFDE---AFNYKEEPDLDAALKRYFP--EGI   89 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~---~g~~~---v~~~~~~~~~~~~~~~~~~--~~~   89 (208)
                      ++.++||+|++|++|..+++.+...|++|+++++++++.+.+.++   .+...   ..|..+.....+.+.....  +++
T Consensus         4 ~~~~~lItG~~g~iG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   83 (253)
T PRK08217          4 KDKVIVITGGAQGLGRAMAEYLAQKGAKLALIDLNQEKLEEAVAECGALGTEVRGYAANVTDEEDVEATFAQIAEDFGQL   83 (253)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            478999999999999999999988999999999888765544322   23321   2333332123333333222  368


Q ss_pred             cEEEeCCC
Q 028523           90 NIYFENVG   97 (208)
Q Consensus        90 d~v~d~~g   97 (208)
                      |.+|++.|
T Consensus        84 d~vi~~ag   91 (253)
T PRK08217         84 NGLINNAG   91 (253)
T ss_pred             CEEEECCC
Confidence            99999887

>PRK07904 short chain dehydrogenase; Provisional

Probab=97.96  E-value=8.9e-05  Score=55.48  Aligned_cols=83  Identities=13%  Similarity=0.135  Sum_probs=53.8

Q ss_pred             CCCCCCEEEEecCCchHHHHHHHHHHHc-CCEEEEEeCCHHH-HHHHHH---hcCC-C-e--eEecCCCccHHHHHHhHC
Q 028523           15 SPKQGEYVFVSAASGAVGQLVGQFAKLV-GCYVVGSAGSKDK-VDLLKN---KFGF-D-E--AFNYKEEPDLDAALKRYF   85 (208)
Q Consensus        15 ~~~~g~~vli~ga~g~vG~~a~qla~~~-g~~v~~~~~s~~~-~~~~~~---~~g~-~-~--v~~~~~~~~~~~~~~~~~   85 (208)
                      .+..+.+++|+||+|++|...++-+... |++|+++++++++ .+.+.+   ..+. . .  .+|..+..++.+.+.+..
T Consensus         4 ~~~~~~~vlItGas~giG~~la~~l~~~gg~~V~~~~r~~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~   83 (253)
T PRK07904          4 AVGNPQTILLLGGTSEIGLAICERYLKNAPARVVLAALPDDPRRDAAVAQMKAAGASSVEVIDFDALDTDSHPKVIDAAF   83 (253)
T ss_pred             ccCCCcEEEEEcCCcHHHHHHHHHHHhcCCCeEEEEeCCcchhHHHHHHHHHhcCCCceEEEEecCCChHHHHHHHHHHH
Confidence            3567789999999999999999876666 5899999988765 443322   2232 1 2  244444323333344332


Q ss_pred             C-CCccEEEeCCC
Q 028523           86 P-EGINIYFENVG   97 (208)
Q Consensus        86 ~-~~~d~v~d~~g   97 (208)
                      . +++|+++.+.|
T Consensus        84 ~~g~id~li~~ag   96 (253)
T PRK07904         84 AGGDVDVAIVAFG   96 (253)
T ss_pred             hcCCCCEEEEeee
Confidence            2 47999998776

>COG0686 Ald Alanine dehydrogenase [Amino acid transport and metabolism]

Probab=97.95  E-value=0.00018  Score=54.19  Aligned_cols=101  Identities=20%  Similarity=0.206  Sum_probs=75.5

Q ss_pred             CCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHHHHhHCCCCccEEEeC
Q 028523           16 PKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFEN   95 (208)
Q Consensus        16 ~~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~d~v~d~   95 (208)
                      +.+++ |.|+|+ |.+|.-++++|-.+|++|...+.+.++++.+...|+-.-..-+++..++.+.++     +.|++|.+
T Consensus       166 V~~~k-v~iiGG-GvvgtnaAkiA~glgA~Vtild~n~~rl~~ldd~f~~rv~~~~st~~~iee~v~-----~aDlvIga  238 (371)
T COG0686         166 VLPAK-VVVLGG-GVVGTNAAKIAIGLGADVTILDLNIDRLRQLDDLFGGRVHTLYSTPSNIEEAVK-----KADLVIGA  238 (371)
T ss_pred             CCCcc-EEEECC-ccccchHHHHHhccCCeeEEEecCHHHHhhhhHhhCceeEEEEcCHHHHHHHhh-----hccEEEEE
Confidence            34444 667786 999999999999999999999999999999986666652222333224555544     37999886


Q ss_pred             C---Cch----hHHHHHHhhccCCEEEEEeccccc
Q 028523           96 V---GGK----MLDAVLLNMRIQGRITLCGMISQY  123 (208)
Q Consensus        96 ~---g~~----~~~~~~~~l~~~G~~v~~g~~~~~  123 (208)
                      +   |.+    ..++..+.|+||+.++.+....+.
T Consensus       239 VLIpgakaPkLvt~e~vk~MkpGsVivDVAiDqGG  273 (371)
T COG0686         239 VLIPGAKAPKLVTREMVKQMKPGSVIVDVAIDQGG  273 (371)
T ss_pred             EEecCCCCceehhHHHHHhcCCCcEEEEEEEcCCC
Confidence            4   222    478889999999999999987764

>PRK05884 short chain dehydrogenase; Provisional

Probab=97.95  E-value=9.4e-05  Score=54.26  Aligned_cols=76  Identities=12%  Similarity=0.189  Sum_probs=53.8

Q ss_pred             EEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCe-eEecCCCccHHHHHHhHCCCCccEEEeCCC
Q 028523           21 YVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDE-AFNYKEEPDLDAALKRYFPEGINIYFENVG   97 (208)
Q Consensus        21 ~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~-v~~~~~~~~~~~~~~~~~~~~~d~v~d~~g   97 (208)
                      +++|+||++++|...++.+...|++|+.+.+++++.+.+.++++... ..|..+..++.+.+.+.. +++|+++++.|
T Consensus         2 ~vlItGas~giG~~ia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~-~~id~lv~~ag   78 (223)
T PRK05884          2 EVLVTGGDTDLGRTIAEGFRNDGHKVTLVGARRDDLEVAAKELDVDAIVCDNTDPASLEEARGLFP-HHLDTIVNVPA   78 (223)
T ss_pred             eEEEEeCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccCcEEecCCCCHHHHHHHHHHHh-hcCcEEEECCC
Confidence            48999999999999999888889999999999888776654555432 345544323333333332 25899998754

>PF02353 CMAS: Mycolic acid cyclopropane synthetase; InterPro: IPR003333 This entry represents mycolic acid cyclopropane synthases and related enzymes, including CmaA1, CmaA2 (cyclopropane mycolic acid synthase A1 and A2) and MmaA1-4 (methoxymycolic acid synthase A1-4)

Probab=97.95  E-value=4e-05  Score=57.82  Aligned_cols=102  Identities=19%  Similarity=0.270  Sum_probs=62.4

Q ss_pred             HHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH---hcCCCeeEecCCCccHHHHHHhHCC
Q 028523           10 FFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKN---KFGFDEAFNYKEEPDLDAALKRYFP   86 (208)
Q Consensus        10 l~~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~---~~g~~~v~~~~~~~~~~~~~~~~~~   86 (208)
                      +.+.+++++|++||-+|  .|.|-.+..+++..|++|++++.|+++.+++++   +.|...-+..... ++.    ++. 
T Consensus        54 ~~~~~~l~~G~~vLDiG--cGwG~~~~~~a~~~g~~v~gitlS~~Q~~~a~~~~~~~gl~~~v~v~~~-D~~----~~~-  125 (273)
T PF02353_consen   54 LCEKLGLKPGDRVLDIG--CGWGGLAIYAAERYGCHVTGITLSEEQAEYARERIREAGLEDRVEVRLQ-DYR----DLP-  125 (273)
T ss_dssp             HHTTTT--TT-EEEEES---TTSHHHHHHHHHH--EEEEEES-HHHHHHHHHHHHCSTSSSTEEEEES--GG----G---
T ss_pred             HHHHhCCCCCCEEEEeC--CCccHHHHHHHHHcCcEEEEEECCHHHHHHHHHHHHhcCCCCceEEEEe-ecc----ccC-
Confidence            44567899999999998  358889999999999999999999999888764   3343221111111 221    111 


Q ss_pred             CCccEEEe-----CCCc----hhHHHHHHhhccCCEEEEEec
Q 028523           87 EGINIYFE-----NVGG----KMLDAVLLNMRIQGRITLCGM  119 (208)
Q Consensus        87 ~~~d~v~d-----~~g~----~~~~~~~~~l~~~G~~v~~g~  119 (208)
                      +.||.|+-     .+|.    ..+..+.+.|+|||+++.-..
T Consensus       126 ~~fD~IvSi~~~Ehvg~~~~~~~f~~~~~~LkpgG~~~lq~i  167 (273)
T PF02353_consen  126 GKFDRIVSIEMFEHVGRKNYPAFFRKISRLLKPGGRLVLQTI  167 (273)
T ss_dssp             -S-SEEEEESEGGGTCGGGHHHHHHHHHHHSETTEEEEEEEE
T ss_pred             CCCCEEEEEechhhcChhHHHHHHHHHHHhcCCCcEEEEEec
Confidence            15888754     4442    247888899999999875443

All are thought to be S-adenosyl-L-methionine (SAM) utilising methyltransferases []. Mycolic acid cyclopropane synthase or cyclopropane-fatty-acyl-phospholipid synthase (CFA synthase) 2.1.1.79 from EC catalyses the reaction: S-adenosyl-L-methionine + phospholipid olefinic fatty acid -> S-adenosyl-L-homocysteine + phospholipid cyclopropane fatty acid. The major mycolic acid produced by Mycobacterium tuberculosis contains two cis-cyclopropanes in the meromycolate chain. Cyclopropanation may contribute to the structural integrity of the cell wall complex [].; GO: 0008610 lipid biosynthetic process; PDB: 3HA5_A 2FK8_A 3HA7_A 3HA3_A 2FK7_A 1KPG_D 1KP9_B 1KPH_D 3VC2_E 3VC1_D ....

>PRK07677 short chain dehydrogenase; Provisional

Probab=97.95  E-value=5e-05  Score=56.66  Aligned_cols=79  Identities=15%  Similarity=0.207  Sum_probs=53.8

Q ss_pred             CCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhc---CCC-ee--EecCCCccHHHHHHhHCC--CCcc
Q 028523           19 GEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKF---GFD-EA--FNYKEEPDLDAALKRYFP--EGIN   90 (208)
Q Consensus        19 g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~---g~~-~v--~~~~~~~~~~~~~~~~~~--~~~d   90 (208)
                      |.+++|+||++++|...++.+...|++|+++++++++.+.+.+++   +.. ..  .|..+...+.+.+.+...  +++|
T Consensus         1 ~k~~lItG~s~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   80 (252)
T PRK07677          1 EKVVIITGGSSGMGKAMAKRFAEEGANVVITGRTKEKLEEAKLEIEQFPGQVLTVQMDVRNPEDVQKMVEQIDEKFGRID   80 (252)
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCcc
Confidence            468999999999999999999889999999999887665554232   221 22  244443233333333321  3689


Q ss_pred             EEEeCCC
Q 028523           91 IYFENVG   97 (208)
Q Consensus        91 ~v~d~~g   97 (208)
                      +++++.|
T Consensus        81 ~lI~~ag   87 (252)
T PRK07677         81 ALINNAA   87 (252)
T ss_pred             EEEECCC
Confidence            9999886

>PRK07024 short chain dehydrogenase; Provisional

Probab=97.94  E-value=9.4e-05  Score=55.37  Aligned_cols=79  Identities=19%  Similarity=0.210  Sum_probs=54.4

Q ss_pred             CCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCC-----eeEecCCCccHHHHHHhHCC--CCccE
Q 028523           19 GEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFD-----EAFNYKEEPDLDAALKRYFP--EGINI   91 (208)
Q Consensus        19 g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~-----~v~~~~~~~~~~~~~~~~~~--~~~d~   91 (208)
                      +.+++|+||+|++|...++.+...|++|+++++++++.+.+.+++...     ..+|..+.+.+.+.+.+...  +.+|+
T Consensus         2 ~~~vlItGas~gIG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~g~id~   81 (257)
T PRK07024          2 PLKVFITGASSGIGQALAREYARQGATLGLVARRTDALQAFAARLPKAARVSVYAADVRDADALAAAAADFIAAHGLPDV   81 (257)
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcccCCeeEEEEcCCCCHHHHHHHHHHHHHhCCCCCE
Confidence            358999999999999999888888999999999888776655344221     12344443233333333322  25899


Q ss_pred             EEeCCC
Q 028523           92 YFENVG   97 (208)
Q Consensus        92 v~d~~g   97 (208)
                      ++++.|
T Consensus        82 lv~~ag   87 (257)
T PRK07024         82 VIANAG   87 (257)
T ss_pred             EEECCC
Confidence            999876

>PRK06194 hypothetical protein; Provisional

Probab=97.94  E-value=5.5e-05  Score=57.54  Aligned_cols=81  Identities=15%  Similarity=0.269  Sum_probs=53.3

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhc---CCC-e--eEecCCCccHHHHHHhHC--CCCc
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKF---GFD-E--AFNYKEEPDLDAALKRYF--PEGI   89 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~---g~~-~--v~~~~~~~~~~~~~~~~~--~~~~   89 (208)
                      .+.++||+||+|++|...++.+...|++|++++++.+..+...+++   +.. .  ..|..+..++.+.+....  .+++
T Consensus         5 ~~k~vlVtGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~g~i   84 (287)
T PRK06194          5 AGKVAVITGAASGFGLAFARIGAALGMKLVLADVQQDALDRAVAELRAQGAEVLGVRTDVSDAAQVEALADAALERFGAV   84 (287)
T ss_pred             CCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence            3678999999999999999988888999999998876655443233   322 1  123333212333222221  1368


Q ss_pred             cEEEeCCCc
Q 028523           90 NIYFENVGG   98 (208)
Q Consensus        90 d~v~d~~g~   98 (208)
                      |++|++.|.
T Consensus        85 d~vi~~Ag~   93 (287)
T PRK06194         85 HLLFNNAGV   93 (287)
T ss_pred             CEEEECCCC
Confidence            999999873

>KOG1014 consensus 17 beta-hydroxysteroid dehydrogenase type 3, HSD17B3 [Lipid transport and metabolism]

Probab=97.94  E-value=8.5e-05  Score=55.93  Aligned_cols=80  Identities=21%  Similarity=0.374  Sum_probs=60.2

Q ss_pred             CCCCEEEEecCCchHHHHHH-HHHHHcCCEEEEEeCCHHHHHHHHHhc----CC---CeeEecCCCccHHHHHHhHCCC-
Q 028523           17 KQGEYVFVSAASGAVGQLVG-QFAKLVGCYVVGSAGSKDKVDLLKNKF----GF---DEAFNYKEEPDLDAALKRYFPE-   87 (208)
Q Consensus        17 ~~g~~vli~ga~g~vG~~a~-qla~~~g~~v~~~~~s~~~~~~~~~~~----g~---~~v~~~~~~~~~~~~~~~~~~~-   87 (208)
                      +.|++.+|+||+.++|.+-+ ++|+ .|.+|+.+.|++++++.+++++    ++   ..++|+.+++...+.+++...+ 
T Consensus        47 ~~g~WAVVTGaTDGIGKayA~eLAk-rG~nvvLIsRt~~KL~~v~kEI~~~~~vev~~i~~Dft~~~~~ye~i~~~l~~~  125 (312)
T KOG1014|consen   47 KLGSWAVVTGATDGIGKAYARELAK-RGFNVVLISRTQEKLEAVAKEIEEKYKVEVRIIAIDFTKGDEVYEKLLEKLAGL  125 (312)
T ss_pred             hcCCEEEEECCCCcchHHHHHHHHH-cCCEEEEEeCCHHHHHHHHHHHHHHhCcEEEEEEEecCCCchhHHHHHHHhcCC
Confidence            35799999999999998855 5555 9999999999999988776544    32   1267888762234555555555 


Q ss_pred             CccEEEeCCC
Q 028523           88 GINIYFENVG   97 (208)
Q Consensus        88 ~~d~v~d~~g   97 (208)
                      .+-+.++++|
T Consensus       126 ~VgILVNNvG  135 (312)
T KOG1014|consen  126 DVGILVNNVG  135 (312)
T ss_pred             ceEEEEeccc
Confidence            7888999988

>PRK06197 short chain dehydrogenase; Provisional

Probab=97.94  E-value=8.4e-05  Score=57.18  Aligned_cols=80  Identities=20%  Similarity=0.240  Sum_probs=53.4

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhc-----CCC-e--eEecCCCccHHHHHHhHCC--C
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKF-----GFD-E--AFNYKEEPDLDAALKRYFP--E   87 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~-----g~~-~--v~~~~~~~~~~~~~~~~~~--~   87 (208)
                      .|.+++|+||+|++|..+++.+...|++|++++++.++.+.+.+++     +.. .  .+|..+..+....+.+...  +
T Consensus        15 ~~k~vlItGas~gIG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~~   94 (306)
T PRK06197         15 SGRVAVVTGANTGLGYETAAALAAKGAHVVLAVRNLDKGKAAAARITAATPGADVTLQELDLTSLASVRAAADALRAAYP   94 (306)
T ss_pred             CCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEECCCCCHHHHHHHHHHHHhhCC
Confidence            5789999999999999999888888999999999877654432222     111 1  2344433233333333322  2


Q ss_pred             CccEEEeCCC
Q 028523           88 GINIYFENVG   97 (208)
Q Consensus        88 ~~d~v~d~~g   97 (208)
                      ++|++|.+.|
T Consensus        95 ~iD~li~nAg  104 (306)
T PRK06197         95 RIDLLINNAG  104 (306)
T ss_pred             CCCEEEECCc
Confidence            6999999887

>PRK06953 short chain dehydrogenase; Provisional

Probab=97.93  E-value=0.00012  Score=53.62  Aligned_cols=77  Identities=16%  Similarity=0.198  Sum_probs=54.8

Q ss_pred             CEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCC-eeEecCCCccHHHHHHhHCCCCccEEEeCCC
Q 028523           20 EYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFD-EAFNYKEEPDLDAALKRYFPEGINIYFENVG   97 (208)
Q Consensus        20 ~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~-~v~~~~~~~~~~~~~~~~~~~~~d~v~d~~g   97 (208)
                      .+++|+|++|++|...++.+...|++|+.++++++..+.+. ..+.. ...|..+...+...+.....+++|+++.+.|
T Consensus         2 ~~vlvtG~sg~iG~~la~~L~~~G~~v~~~~r~~~~~~~~~-~~~~~~~~~D~~~~~~v~~~~~~~~~~~~d~vi~~ag   79 (222)
T PRK06953          2 KTVLIVGASRGIGREFVRQYRADGWRVIATARDAAALAALQ-ALGAEALALDVADPASVAGLAWKLDGEALDAAVYVAG   79 (222)
T ss_pred             ceEEEEcCCCchhHHHHHHHHhCCCEEEEEECCHHHHHHHH-hccceEEEecCCCHHHHHHHHHHhcCCCCCEEEECCC
Confidence            46899999999999999888778999999999888777776 55543 2344444423333333333337999999876

>PRK06398 aldose dehydrogenase; Validated

Probab=97.93  E-value=5.5e-05  Score=56.71  Aligned_cols=75  Identities=15%  Similarity=0.164  Sum_probs=50.7

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHHHHhHCC--CCccEEEeC
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFP--EGINIYFEN   95 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~--~~~d~v~d~   95 (208)
                      +|.++||+||++++|...++.+...|++|+++++++++...+.     ....|..+..++.+.+.+...  +++|++|++
T Consensus         5 ~gk~vlItGas~gIG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~-----~~~~D~~~~~~i~~~~~~~~~~~~~id~li~~   79 (258)
T PRK06398          5 KDKVAIVTGGSQGIGKAVVNRLKEEGSNVINFDIKEPSYNDVD-----YFKVDVSNKEQVIKGIDYVISKYGRIDILVNN   79 (258)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCccccCceE-----EEEccCCCHHHHHHHHHHHHHHcCCCCEEEEC
Confidence            4689999999999999999999899999999997764422110     112344443233333333322  269999998


Q ss_pred             CC
Q 028523           96 VG   97 (208)
Q Consensus        96 ~g   97 (208)
                      .|
T Consensus        80 Ag   81 (258)
T PRK06398         80 AG   81 (258)
T ss_pred             CC
Confidence            76

>PRK07067 sorbitol dehydrogenase; Provisional

Probab=97.93  E-value=8.6e-05  Score=55.56  Aligned_cols=80  Identities=20%  Similarity=0.296  Sum_probs=55.8

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCC-e--eEecCCCccHHHHHHhHCC--CCccEE
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFD-E--AFNYKEEPDLDAALKRYFP--EGINIY   92 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~-~--v~~~~~~~~~~~~~~~~~~--~~~d~v   92 (208)
                      .+.+++|+|++|++|...++.+...|++|+.++++.++.+.+.++++.. .  ..|..+.....+.+.+...  +++|++
T Consensus         5 ~~~~vlItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~l   84 (257)
T PRK07067          5 QGKVALLTGAASGIGEAVAERYLAEGARVVIADIKPARARLAALEIGPAAIAVSLDVTRQDSIDRIVAAAVERFGGIDIL   84 (257)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            3678999999999999999999888999999999988777665455432 1  2343333233333333221  368999


Q ss_pred             EeCCC
Q 028523           93 FENVG   97 (208)
Q Consensus        93 ~d~~g   97 (208)
                      +.+.|
T Consensus        85 i~~ag   89 (257)
T PRK07067         85 FNNAA   89 (257)
T ss_pred             EECCC
Confidence            99876

>PRK11705 cyclopropane fatty acyl phospholipid synthase; Provisional

Probab=97.93  E-value=0.00019  Score=56.95  Aligned_cols=104  Identities=17%  Similarity=0.134  Sum_probs=72.1

Q ss_pred             HHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHHHHhHCC
Q 028523            7 YAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFP   86 (208)
Q Consensus         7 ~~~l~~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~   86 (208)
                      +..+.+...+++|++||-.|.  |.|..+..+++..|++|++++.|++..+.+++...... +..... ++.+    . .
T Consensus       156 ~~~l~~~l~l~~g~rVLDIGc--G~G~~a~~la~~~g~~V~giDlS~~~l~~A~~~~~~l~-v~~~~~-D~~~----l-~  226 (383)
T PRK11705        156 LDLICRKLQLKPGMRVLDIGC--GWGGLARYAAEHYGVSVVGVTISAEQQKLAQERCAGLP-VEIRLQ-DYRD----L-N  226 (383)
T ss_pred             HHHHHHHhCCCCCCEEEEeCC--CccHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhccCe-EEEEEC-chhh----c-C
Confidence            444556677899999999984  67888889999889999999999999998884332111 111112 3321    1 3


Q ss_pred             CCccEEEeC-----CCc----hhHHHHHHhhccCCEEEEEec
Q 028523           87 EGINIYFEN-----VGG----KMLDAVLLNMRIQGRITLCGM  119 (208)
Q Consensus        87 ~~~d~v~d~-----~g~----~~~~~~~~~l~~~G~~v~~g~  119 (208)
                      +.+|.|+..     +|.    ..+..+.+.|+|||.++....
T Consensus       227 ~~fD~Ivs~~~~ehvg~~~~~~~l~~i~r~LkpGG~lvl~~i  268 (383)
T PRK11705        227 GQFDRIVSVGMFEHVGPKNYRTYFEVVRRCLKPDGLFLLHTI  268 (383)
T ss_pred             CCCCEEEEeCchhhCChHHHHHHHHHHHHHcCCCcEEEEEEc
Confidence            469988643     332    357888899999999887543

>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase

Probab=97.93  E-value=7.9e-05  Score=55.38  Aligned_cols=79  Identities=19%  Similarity=0.275  Sum_probs=52.5

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHH--HHHHHHhcCCC-e--eEecCCCccHHHHHHhHCC--CCcc
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDK--VDLLKNKFGFD-E--AFNYKEEPDLDAALKRYFP--EGIN   90 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~--~~~~~~~~g~~-~--v~~~~~~~~~~~~~~~~~~--~~~d   90 (208)
                      .|.+++|+||+|++|...++.+...|++|+.+++++..  .+.+. +++.. .  ..|..+..++...+.+...  +++|
T Consensus         4 ~~k~vlItGas~gIG~~ia~~l~~~G~~vi~~~r~~~~~~~~~~~-~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d   82 (248)
T TIGR01832         4 EGKVALVTGANTGLGQGIAVGLAEAGADIVGAGRSEPSETQQQVE-ALGRRFLSLTADLSDIEAIKALVDSAVEEFGHID   82 (248)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCchHHHHHHHHH-hcCCceEEEECCCCCHHHHHHHHHHHHHHcCCCC
Confidence            47899999999999999998888889999999987532  23333 44432 1  2344443233333333321  3699


Q ss_pred             EEEeCCC
Q 028523           91 IYFENVG   97 (208)
Q Consensus        91 ~v~d~~g   97 (208)
                      +++++.|
T Consensus        83 ~li~~ag   89 (248)
T TIGR01832        83 ILVNNAG   89 (248)
T ss_pred             EEEECCC
Confidence            9999886

This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.

>PRK08340 glucose-1-dehydrogenase; Provisional

Probab=97.93  E-value=6.2e-05  Score=56.43  Aligned_cols=77  Identities=23%  Similarity=0.273  Sum_probs=52.8

Q ss_pred             EEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhc---CCCe--eEecCCCccHHHHHHhHCC--CCccEEE
Q 028523           21 YVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKF---GFDE--AFNYKEEPDLDAALKRYFP--EGINIYF   93 (208)
Q Consensus        21 ~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~---g~~~--v~~~~~~~~~~~~~~~~~~--~~~d~v~   93 (208)
                      +++|+||++++|...++.+...|++|+.+++++++.+.+.+++   +...  ..|..+..++.+.+.+...  +++|++|
T Consensus         2 ~vlItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~d~~~~~~~~~~~~~~~g~id~li   81 (259)
T PRK08340          2 NVLVTASSRGIGFNVARELLKKGARVVISSRNEENLEKALKELKEYGEVYAVKADLSDKDDLKNLVKEAWELLGGIDALV   81 (259)
T ss_pred             eEEEEcCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEcCCCCHHHHHHHHHHHHHhcCCCCEEE
Confidence            5899999999999999888888999999999887765554333   2212  2344443233333333322  3699999


Q ss_pred             eCCC
Q 028523           94 ENVG   97 (208)
Q Consensus        94 d~~g   97 (208)
                      ++.|
T Consensus        82 ~naG   85 (259)
T PRK08340         82 WNAG   85 (259)
T ss_pred             ECCC
Confidence            9887

>PRK06483 dihydromonapterin reductase; Provisional

Probab=97.92  E-value=9.3e-05  Score=54.62  Aligned_cols=78  Identities=14%  Similarity=0.175  Sum_probs=53.1

Q ss_pred             CCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHH-HHHHHhcCCCe-eEecCCCccHHHHHHhHCC--CCccEEEe
Q 028523           19 GEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKV-DLLKNKFGFDE-AFNYKEEPDLDAALKRYFP--EGINIYFE   94 (208)
Q Consensus        19 g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~-~~~~~~~g~~~-v~~~~~~~~~~~~~~~~~~--~~~d~v~d   94 (208)
                      +.++||+||++++|...++.+...|++|+++++++++. +.++ ..+... ..|..+.+.....+.+...  +++|++++
T Consensus         2 ~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~   80 (236)
T PRK06483          2 PAPILITGAGQRIGLALAWHLLAQGQPVIVSYRTHYPAIDGLR-QAGAQCIQADFSTNAGIMAFIDELKQHTDGLRAIIH   80 (236)
T ss_pred             CceEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHH-HcCCEEEEcCCCCHHHHHHHHHHHHhhCCCccEEEE
Confidence            45899999999999999998888999999999876543 3333 455422 2344443234444443322  26999999


Q ss_pred             CCC
Q 028523           95 NVG   97 (208)
Q Consensus        95 ~~g   97 (208)
                      +.|
T Consensus        81 ~ag   83 (236)
T PRK06483         81 NAS   83 (236)
T ss_pred             CCc
Confidence            887

>PRK08594 enoyl-(acyl carrier protein) reductase; Provisional

Probab=97.92  E-value=0.00023  Score=53.42  Aligned_cols=105  Identities=10%  Similarity=0.059  Sum_probs=67.3

Q ss_pred             CCCEEEEecCC--chHHHHHHHHHHHcCCEEEEEeCCH---HHHHHHHHhcC-CC---eeEecCCCccHHHHHHhHCC--
Q 028523           18 QGEYVFVSAAS--GAVGQLVGQFAKLVGCYVVGSAGSK---DKVDLLKNKFG-FD---EAFNYKEEPDLDAALKRYFP--   86 (208)
Q Consensus        18 ~g~~vli~ga~--g~vG~~a~qla~~~g~~v~~~~~s~---~~~~~~~~~~g-~~---~v~~~~~~~~~~~~~~~~~~--   86 (208)
                      .|.+++|+||+  +++|.+.++.+...|++|+.++++.   ++.+.+.+++. ..   ...|..+..+..+.+.+...  
T Consensus         6 ~~k~~lItGa~~s~GIG~aia~~la~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~   85 (257)
T PRK08594          6 EGKTYVVMGVANKRSIAWGIARSLHNAGAKLVFTYAGERLEKEVRELADTLEGQESLLLPCDVTSDEEITACFETIKEEV   85 (257)
T ss_pred             CCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEecCcccchHHHHHHHHHcCCCceEEEecCCCCHHHHHHHHHHHHHhC
Confidence            47899999987  7999999988888999999987543   34444443442 21   12455444234444444332  


Q ss_pred             CCccEEEeCCCc-h------h-----------------------HHHHHHhhccCCEEEEEecccc
Q 028523           87 EGINIYFENVGG-K------M-----------------------LDAVLLNMRIQGRITLCGMISQ  122 (208)
Q Consensus        87 ~~~d~v~d~~g~-~------~-----------------------~~~~~~~l~~~G~~v~~g~~~~  122 (208)
                      +++|+++++.|. .      .                       ....++.|.++|+++.++...+
T Consensus        86 g~ld~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~Iv~isS~~~  151 (257)
T PRK08594         86 GVIHGVAHCIAFANKEDLRGEFLETSRDGFLLAQNISAYSLTAVAREAKKLMTEGGSIVTLTYLGG  151 (257)
T ss_pred             CCccEEEECcccCCCCcCCCccccCCHHHHHHHHhhhHHHHHHHHHHHHHhcccCceEEEEcccCC
Confidence            369999998761 1      0                       1234556667899998887543

>PRK06101 short chain dehydrogenase; Provisional

Probab=97.92  E-value=0.00051  Score=50.90  Aligned_cols=77  Identities=19%  Similarity=0.232  Sum_probs=50.9

Q ss_pred             CEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCe--eEecCCCccHHHHHHhHCCCCccEEEeCCC
Q 028523           20 EYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDE--AFNYKEEPDLDAALKRYFPEGINIYFENVG   97 (208)
Q Consensus        20 ~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~--v~~~~~~~~~~~~~~~~~~~~~d~v~d~~g   97 (208)
                      .+++|+||+|++|...++.+...|++|+++++++++.+.+.+......  ..|..+.+++.+.+.+.. ..+|.++.+.|
T Consensus         2 ~~vlItGas~giG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~-~~~d~~i~~ag   80 (240)
T PRK06101          2 TAVLITGATSGIGKQLALDYAKQGWQVIACGRNQSVLDELHTQSANIFTLAFDVTDHPGTKAALSQLP-FIPELWIFNAG   80 (240)
T ss_pred             cEEEEEcCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHhcCCCeEEEeeCCCHHHHHHHHHhcc-cCCCEEEEcCc
Confidence            468999999999999888888889999999999887776652221111  345554423444444322 24577666554

>PRK09291 short chain dehydrogenase; Provisional

Probab=97.91  E-value=0.00015  Score=54.19  Aligned_cols=75  Identities=13%  Similarity=0.248  Sum_probs=52.6

Q ss_pred             CCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH---hcCCC-e--eEecCCCccHHHHHHhHCCCCccEE
Q 028523           19 GEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKN---KFGFD-E--AFNYKEEPDLDAALKRYFPEGINIY   92 (208)
Q Consensus        19 g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~---~~g~~-~--v~~~~~~~~~~~~~~~~~~~~~d~v   92 (208)
                      +.++||+||+|++|..+++.+...|++|+++++++++.+.+.+   ..+.. .  ..|..+.    +.+.+...+++|++
T Consensus         2 ~~~vlVtGasg~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~----~~~~~~~~~~id~v   77 (257)
T PRK09291          2 SKTILITGAGSGFGREVALRLARKGHNVIAGVQIAPQVTALRAEAARRGLALRVEKLDLTDA----IDRAQAAEWDVDVL   77 (257)
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcceEEEeeCCCH----HHHHHHhcCCCCEE
Confidence            4579999999999999999999999999999998776655542   22322 1  2344432    22333333479999


Q ss_pred             EeCCC
Q 028523           93 FENVG   97 (208)
Q Consensus        93 ~d~~g   97 (208)
                      |.+.|
T Consensus        78 i~~ag   82 (257)
T PRK09291         78 LNNAG   82 (257)
T ss_pred             EECCC
Confidence            99887

>PRK08589 short chain dehydrogenase; Validated

Probab=97.91  E-value=7.3e-05  Score=56.53  Aligned_cols=79  Identities=18%  Similarity=0.264  Sum_probs=52.9

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhc---CCC---eeEecCCCccHHHHHHhHCC--CCc
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKF---GFD---EAFNYKEEPDLDAALKRYFP--EGI   89 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~---g~~---~v~~~~~~~~~~~~~~~~~~--~~~   89 (208)
                      ++.++||+||++++|...++.+...|++|++++++ ++.+.+.+++   +..   ..+|..+.......+.+...  +++
T Consensus         5 ~~k~vlItGas~gIG~aia~~l~~~G~~vi~~~r~-~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~i   83 (272)
T PRK08589          5 ENKVAVITGASTGIGQASAIALAQEGAYVLAVDIA-EAVSETVDKIKSNGGKAKAYHVDISDEQQVKDFASEIKEQFGRV   83 (272)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCc-HHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHHHHHcCCc
Confidence            57899999999999999998888889999999988 4443322233   321   13455544233333333321  368


Q ss_pred             cEEEeCCC
Q 028523           90 NIYFENVG   97 (208)
Q Consensus        90 d~v~d~~g   97 (208)
                      |++|++.|
T Consensus        84 d~li~~Ag   91 (272)
T PRK08589         84 DVLFNNAG   91 (272)
T ss_pred             CEEEECCC
Confidence            99999886

>PRK09242 tropinone reductase; Provisional

Probab=97.91  E-value=7.1e-05  Score=55.99  Aligned_cols=81  Identities=21%  Similarity=0.295  Sum_probs=55.2

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhc-----CCCe---eEecCCCccHHHHHHhHC--CC
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKF-----GFDE---AFNYKEEPDLDAALKRYF--PE   87 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~-----g~~~---v~~~~~~~~~~~~~~~~~--~~   87 (208)
                      .|.+++|+||+|++|...++.+...|++|++++++.++.+.+.+++     +...   ..|..+...+...+.+..  -+
T Consensus         8 ~~k~~lItGa~~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g   87 (257)
T PRK09242          8 DGQTALITGASKGIGLAIAREFLGLGADVLIVARDADALAQARDELAEEFPEREVHGLAADVSDDEDRRAILDWVEDHWD   87 (257)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            4789999999999999999999889999999999887765554332     2211   234443322333333322  13


Q ss_pred             CccEEEeCCCc
Q 028523           88 GINIYFENVGG   98 (208)
Q Consensus        88 ~~d~v~d~~g~   98 (208)
                      ++|+++.+.|.
T Consensus        88 ~id~li~~ag~   98 (257)
T PRK09242         88 GLHILVNNAGG   98 (257)
T ss_pred             CCCEEEECCCC
Confidence            69999999873

>PRK06482 short chain dehydrogenase; Provisional

Probab=97.91  E-value=9.9e-05  Score=55.83  Aligned_cols=78  Identities=22%  Similarity=0.308  Sum_probs=54.4

Q ss_pred             CEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCC-e--eEecCCCccHHHHHHhHC--CCCccEEEe
Q 028523           20 EYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFD-E--AFNYKEEPDLDAALKRYF--PEGINIYFE   94 (208)
Q Consensus        20 ~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~-~--v~~~~~~~~~~~~~~~~~--~~~~d~v~d   94 (208)
                      .++||+||+|++|...++.+...|++|+++++++++.+.+.+..+.. .  ..|..+...+.+.+.+..  .+++|++|.
T Consensus         3 k~vlVtGasg~IG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~   82 (276)
T PRK06482          3 KTWFITGASSGFGRGMTERLLARGDRVAATVRRPDALDDLKARYGDRLWVLQLDVTDSAAVRAVVDRAFAALGRIDVVVS   82 (276)
T ss_pred             CEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence            57999999999999999888888999999999988877766344322 1  244444322333333322  136899999


Q ss_pred             CCC
Q 028523           95 NVG   97 (208)
Q Consensus        95 ~~g   97 (208)
                      +.|
T Consensus        83 ~ag   85 (276)
T PRK06482         83 NAG   85 (276)
T ss_pred             CCC
Confidence            887

>PRK08415 enoyl-(acyl carrier protein) reductase; Provisional

Probab=97.91  E-value=9.3e-05  Score=56.08  Aligned_cols=105  Identities=9%  Similarity=0.096  Sum_probs=69.9

Q ss_pred             CCCEEEEecCC--chHHHHHHHHHHHcCCEEEEEeCCHH---HHHHHHHhcCCCe--eEecCCCccHHHHHHhHCC--CC
Q 028523           18 QGEYVFVSAAS--GAVGQLVGQFAKLVGCYVVGSAGSKD---KVDLLKNKFGFDE--AFNYKEEPDLDAALKRYFP--EG   88 (208)
Q Consensus        18 ~g~~vli~ga~--g~vG~~a~qla~~~g~~v~~~~~s~~---~~~~~~~~~g~~~--v~~~~~~~~~~~~~~~~~~--~~   88 (208)
                      .|++++|+||+  +++|++.++.+...|++|+.+.++++   +.+.+.++++...  ..|..+.+.....+.+...  ++
T Consensus         4 ~~k~~lItGas~~~GIG~aiA~~la~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~i~~~~g~   83 (274)
T PRK08415          4 KGKKGLIVGVANNKSIAYGIAKACFEQGAELAFTYLNEALKKRVEPIAQELGSDYVYELDVSKPEHFKSLAESLKKDLGK   83 (274)
T ss_pred             CCcEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEecCHHHHHHHHHHHHhcCCceEEEecCCCHHHHHHHHHHHHHHcCC
Confidence            47899999997  79999999988889999999988753   3333332455332  3455554234444443322  37


Q ss_pred             ccEEEeCCCc-h-----------------------------hHHHHHHhhccCCEEEEEecccc
Q 028523           89 INIYFENVGG-K-----------------------------MLDAVLLNMRIQGRITLCGMISQ  122 (208)
Q Consensus        89 ~d~v~d~~g~-~-----------------------------~~~~~~~~l~~~G~~v~~g~~~~  122 (208)
                      +|+++++.|. .                             .....++.|..+|+++.++...+
T Consensus        84 iDilVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~g~Iv~isS~~~  147 (274)
T PRK08415         84 IDFIVHSVAFAPKEALEGSFLETSKEAFNIAMEISVYSLIELTRALLPLLNDGASVLTLSYLGG  147 (274)
T ss_pred             CCEEEECCccCcccccccccccCCHHHHHHHhhhhhHHHHHHHHHHHHHhccCCcEEEEecCCC
Confidence            9999999872 1                             02445667777899998876543

>PRK07774 short chain dehydrogenase; Provisional

Probab=97.90  E-value=8.2e-05  Score=55.34  Aligned_cols=80  Identities=16%  Similarity=0.200  Sum_probs=53.0

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhc---CCC-e--eEecCCCccHHHHHHhHC--CCCc
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKF---GFD-E--AFNYKEEPDLDAALKRYF--PEGI   89 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~---g~~-~--v~~~~~~~~~~~~~~~~~--~~~~   89 (208)
                      .+.+++|+||+|++|...++.+...|++|+.+.++++..+.+.+++   +.. .  ..|..+...+...+.+..  .+++
T Consensus         5 ~~k~vlItGasg~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   84 (250)
T PRK07774          5 DDKVAIVTGAAGGIGQAYAEALAREGASVVVADINAEGAERVAKQIVADGGTAIAVQVDVSDPDSAKAMADATVSAFGGI   84 (250)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhCCC
Confidence            4678999999999999999888888999999998876654443232   211 1  234443312222222221  1269


Q ss_pred             cEEEeCCC
Q 028523           90 NIYFENVG   97 (208)
Q Consensus        90 d~v~d~~g   97 (208)
                      |++|.+.|
T Consensus        85 d~vi~~ag   92 (250)
T PRK07774         85 DYLVNNAA   92 (250)
T ss_pred             CEEEECCC
Confidence            99999887

>PRK08643 acetoin reductase; Validated

Probab=97.90  E-value=6.4e-05  Score=56.19  Aligned_cols=79  Identities=15%  Similarity=0.200  Sum_probs=53.8

Q ss_pred             CCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhc---CCCe---eEecCCCccHHHHHHhHCC--CCcc
Q 028523           19 GEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKF---GFDE---AFNYKEEPDLDAALKRYFP--EGIN   90 (208)
Q Consensus        19 g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~---g~~~---v~~~~~~~~~~~~~~~~~~--~~~d   90 (208)
                      +++++|+||+|++|...++.+...|++|+.+++++++.+.+.+++   +...   ..|..+.+.+.+.+.+...  +++|
T Consensus         2 ~k~~lItGas~giG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id   81 (256)
T PRK08643          2 SKVALVTGAGQGIGFAIAKRLVEDGFKVAIVDYNEETAQAAADKLSKDGGKAIAVKADVSDRDQVFAAVRQVVDTFGDLN   81 (256)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCCC
Confidence            568999999999999999998888999999999887665544332   2221   2344443233333333321  3699


Q ss_pred             EEEeCCC
Q 028523           91 IYFENVG   97 (208)
Q Consensus        91 ~v~d~~g   97 (208)
                      ++|.+.|
T Consensus        82 ~vi~~ag   88 (256)
T PRK08643         82 VVVNNAG   88 (256)
T ss_pred             EEEECCC
Confidence            9999886

>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase

Probab=97.90  E-value=0.00026  Score=50.76  Aligned_cols=77  Identities=19%  Similarity=0.252  Sum_probs=52.6

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcC----CCe-eEecCCCccHHHHHHhHCCCCccEE
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFG----FDE-AFNYKEEPDLDAALKRYFPEGINIY   92 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g----~~~-v~~~~~~~~~~~~~~~~~~~~~d~v   92 (208)
                      ++.+++|+||+|++|...++.+...|++|+++.++.++.+.+.+.++    ... ..+..+.++..+.+.     ++|+|
T Consensus        27 ~~~~vlVlGgtG~iG~~~a~~l~~~g~~V~l~~R~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~-----~~diV  101 (194)
T cd01078          27 KGKTAVVLGGTGPVGQRAAVLLAREGARVVLVGRDLERAQKAADSLRARFGEGVGAVETSDDAARAAAIK-----GADVV  101 (194)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhhcCCcEEEeeCCCHHHHHHHHh-----cCCEE
Confidence            56899999999999999888888888999999999887766653442    221 222222112222222     48999


Q ss_pred             EeCCCch
Q 028523           93 FENVGGK   99 (208)
Q Consensus        93 ~d~~g~~   99 (208)
                      |.+++..
T Consensus       102 i~at~~g  108 (194)
T cd01078         102 FAAGAAG  108 (194)
T ss_pred             EECCCCC
Confidence            9988843

Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo

>PRK08213 gluconate 5-dehydrogenase; Provisional

Probab=97.89  E-value=9.3e-05  Score=55.43  Aligned_cols=80  Identities=21%  Similarity=0.336  Sum_probs=54.8

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhc---CCC---eeEecCCCccHHHHHHhHCC--CCc
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKF---GFD---EAFNYKEEPDLDAALKRYFP--EGI   89 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~---g~~---~v~~~~~~~~~~~~~~~~~~--~~~   89 (208)
                      ++.++||+||+|++|...++.+...|++|++++++.++.+.+.+.+   +..   ...|..+.+.+.+.+.+...  +++
T Consensus        11 ~~k~ilItGa~g~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~Dl~d~~~i~~~~~~~~~~~~~i   90 (259)
T PRK08213         11 SGKTALVTGGSRGLGLQIAEALGEAGARVVLSARKAEELEEAAAHLEALGIDALWIAADVADEADIERLAEETLERFGHV   90 (259)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence            4789999999999999999888889999999999887766554332   221   12344443233333333221  368


Q ss_pred             cEEEeCCC
Q 028523           90 NIYFENVG   97 (208)
Q Consensus        90 d~v~d~~g   97 (208)
                      |.+|.+.|
T Consensus        91 d~vi~~ag   98 (259)
T PRK08213         91 DILVNNAG   98 (259)
T ss_pred             CEEEECCC
Confidence            99999887

>PRK08085 gluconate 5-dehydrogenase; Provisional

Probab=97.88  E-value=9.1e-05  Score=55.31  Aligned_cols=80  Identities=18%  Similarity=0.372  Sum_probs=54.1

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhc---CCC-e--eEecCCCccHHHHHHhHCC--CCc
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKF---GFD-E--AFNYKEEPDLDAALKRYFP--EGI   89 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~---g~~-~--v~~~~~~~~~~~~~~~~~~--~~~   89 (208)
                      .+.++||+||++++|...++.+...|++|+.+++++++.+.+.+++   +.. .  ..|..+.+.+.+.+.....  +++
T Consensus         8 ~~k~~lItGas~giG~~ia~~L~~~G~~vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   87 (254)
T PRK08085          8 AGKNILITGSAQGIGFLLATGLAEYGAEIIINDITAERAELAVAKLRQEGIKAHAAPFNVTHKQEVEAAIEHIEKDIGPI   87 (254)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEecCCCCHHHHHHHHHHHHHhcCCC
Confidence            4778999999999999999888888999999998877665543233   221 1  2344433223333333221  369


Q ss_pred             cEEEeCCC
Q 028523           90 NIYFENVG   97 (208)
Q Consensus        90 d~v~d~~g   97 (208)
                      |+++.+.|
T Consensus        88 d~vi~~ag   95 (254)
T PRK08085         88 DVLINNAG   95 (254)
T ss_pred             CEEEECCC
Confidence            99999887

>PRK08862 short chain dehydrogenase; Provisional

Probab=97.87  E-value=0.00011  Score=54.08  Aligned_cols=80  Identities=6%  Similarity=0.142  Sum_probs=54.6

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHh---cCCCe---eEecCCCccHHHHHHhH---CCCC
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNK---FGFDE---AFNYKEEPDLDAALKRY---FPEG   88 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~---~g~~~---v~~~~~~~~~~~~~~~~---~~~~   88 (208)
                      +|.+++|+||++++|.+.++.+...|++|+.+.+++++.+.+.++   .+...   ..|..+.+++.+.+.+.   .+++
T Consensus         4 ~~k~~lVtGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~   83 (227)
T PRK08862          4 KSSIILITSAGSVLGRTISCHFARLGATLILCDQDQSALKDTYEQCSALTDNVYSFQLKDFSQESIRHLFDAIEQQFNRA   83 (227)
T ss_pred             CCeEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence            468999999999999999988888999999999988876554322   34321   23433332333333332   2226


Q ss_pred             ccEEEeCCC
Q 028523           89 INIYFENVG   97 (208)
Q Consensus        89 ~d~v~d~~g   97 (208)
                      +|++|++.|
T Consensus        84 iD~li~nag   92 (227)
T PRK08862         84 PDVLVNNWT   92 (227)
T ss_pred             CCEEEECCc
Confidence            999999986

>PRK06138 short chain dehydrogenase; Provisional

Probab=97.86  E-value=0.00012  Score=54.50  Aligned_cols=80  Identities=14%  Similarity=0.198  Sum_probs=53.7

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhc--CCC-e--eEecCCCccHHHHHHhHCC--CCcc
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKF--GFD-E--AFNYKEEPDLDAALKRYFP--EGIN   90 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~--g~~-~--v~~~~~~~~~~~~~~~~~~--~~~d   90 (208)
                      ++.+++|+||+|++|...++.+...|++|+.++++.++.+...+.+  +.. .  ..|..+.....+.+.....  +++|
T Consensus         4 ~~k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~id   83 (252)
T PRK06138          4 AGRVAIVTGAGSGIGRATAKLFAREGARVVVADRDAEAAERVAAAIAAGGRAFARQGDVGSAEAVEALVDFVAARWGRLD   83 (252)
T ss_pred             CCcEEEEeCCCchHHHHHHHHHHHCCCeEEEecCCHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCC
Confidence            4678999999999999999888788999999999887665544333  221 1  2344433123333333221  3699


Q ss_pred             EEEeCCC
Q 028523           91 IYFENVG   97 (208)
Q Consensus        91 ~v~d~~g   97 (208)
                      +++.+.|
T Consensus        84 ~vi~~ag   90 (252)
T PRK06138         84 VLVNNAG   90 (252)
T ss_pred             EEEECCC
Confidence            9999887

>PRK08251 short chain dehydrogenase; Provisional

Probab=97.86  E-value=0.00011  Score=54.69  Aligned_cols=79  Identities=16%  Similarity=0.285  Sum_probs=53.3

Q ss_pred             CCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhc-----CCC-e--eEecCCCccHHHHHHhHCC--CC
Q 028523           19 GEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKF-----GFD-E--AFNYKEEPDLDAALKRYFP--EG   88 (208)
Q Consensus        19 g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~-----g~~-~--v~~~~~~~~~~~~~~~~~~--~~   88 (208)
                      +.+++|+||+|++|...++.+...|++|+++++++++.+.+.+.+     +.. .  ..|..+...+...+.+...  ++
T Consensus         2 ~k~vlItGas~giG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   81 (248)
T PRK08251          2 RQKILITGASSGLGAGMAREFAAKGRDLALCARRTDRLEELKAELLARYPGIKVAVAALDVNDHDQVFEVFAEFRDELGG   81 (248)
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            468999999999999988888788999999999988766554222     211 1  2355443233333333322  36


Q ss_pred             ccEEEeCCC
Q 028523           89 INIYFENVG   97 (208)
Q Consensus        89 ~d~v~d~~g   97 (208)
                      +|++|.+.|
T Consensus        82 id~vi~~ag   90 (248)
T PRK08251         82 LDRVIVNAG   90 (248)
T ss_pred             CCEEEECCC
Confidence            999999886

>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional

Probab=97.86  E-value=0.00011  Score=55.66  Aligned_cols=80  Identities=11%  Similarity=0.145  Sum_probs=53.4

Q ss_pred             CCCEEEEecCCc--hHHHHHHHHHHHcCCEEEEEeCCHHHH---HHHHHhcCCCe--eEecCCCccHHHHHHhHCC--CC
Q 028523           18 QGEYVFVSAASG--AVGQLVGQFAKLVGCYVVGSAGSKDKV---DLLKNKFGFDE--AFNYKEEPDLDAALKRYFP--EG   88 (208)
Q Consensus        18 ~g~~vli~ga~g--~vG~~a~qla~~~g~~v~~~~~s~~~~---~~~~~~~g~~~--v~~~~~~~~~~~~~~~~~~--~~   88 (208)
                      +++++||+||++  ++|.+.++.+...|++|+++.++++..   +.+.+++|...  ..|..+..+..+.+.+...  ++
T Consensus         6 ~~k~~lVTGas~~~GIG~aiA~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~g~~~~~~~Dv~d~~~v~~~~~~~~~~~g~   85 (271)
T PRK06505          6 QGKRGLIMGVANDHSIAWGIAKQLAAQGAELAFTYQGEALGKRVKPLAESLGSDFVLPCDVEDIASVDAVFEALEKKWGK   85 (271)
T ss_pred             CCCEEEEeCCCCCCcHHHHHHHHHHhCCCEEEEecCchHHHHHHHHHHHhcCCceEEeCCCCCHHHHHHHHHHHHHHhCC
Confidence            578999999986  999999999888999999988775432   23322445332  2344443233333443322  37


Q ss_pred             ccEEEeCCC
Q 028523           89 INIYFENVG   97 (208)
Q Consensus        89 ~d~v~d~~g   97 (208)
                      +|+++++.|
T Consensus        86 iD~lVnnAG   94 (271)
T PRK06505         86 LDFVVHAIG   94 (271)
T ss_pred             CCEEEECCc
Confidence            999999887

>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional

Probab=97.86  E-value=9.2e-05  Score=55.34  Aligned_cols=104  Identities=13%  Similarity=0.058  Sum_probs=66.8

Q ss_pred             CCCEEEEecCC--chHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCe----eEecCCCccHHHHHHhHCC--CCc
Q 028523           18 QGEYVFVSAAS--GAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDE----AFNYKEEPDLDAALKRYFP--EGI   89 (208)
Q Consensus        18 ~g~~vli~ga~--g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~----v~~~~~~~~~~~~~~~~~~--~~~   89 (208)
                      .|++++|+||+  +++|.+.++.+...|++|+.++++++..+.++ ++....    ..|..+..+..+.+.+...  +++
T Consensus         6 ~~k~~lItGas~~~gIG~a~a~~la~~G~~Vi~~~r~~~~~~~~~-~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~i   84 (252)
T PRK06079          6 SGKKIVVMGVANKRSIAWGCAQAIKDQGATVIYTYQNDRMKKSLQ-KLVDEEDLLVECDVASDESIERAFATIKERVGKI   84 (252)
T ss_pred             CCCEEEEeCCCCCCchHHHHHHHHHHCCCEEEEecCchHHHHHHH-hhccCceeEEeCCCCCHHHHHHHHHHHHHHhCCC
Confidence            57899999998  79999999888889999999988754333344 432211    2344443233333333322  369


Q ss_pred             cEEEeCCCc-h-----------h------------------HHHHHHhhccCCEEEEEecccc
Q 028523           90 NIYFENVGG-K-----------M------------------LDAVLLNMRIQGRITLCGMISQ  122 (208)
Q Consensus        90 d~v~d~~g~-~-----------~------------------~~~~~~~l~~~G~~v~~g~~~~  122 (208)
                      |+++++.|. .           .                  ....++.|..+|+++.++....
T Consensus        85 D~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~l~~~~~~~~~~~g~Iv~iss~~~  147 (252)
T PRK06079         85 DGIVHAIAYAKKEELGGNVTDTSRDGYALAQDISAYSLIAVAKYARPLLNPGASIVTLTYFGS  147 (252)
T ss_pred             CEEEEcccccccccccCCcccCCHHHHHHHhCcccHHHHHHHHHHHHhcccCceEEEEeccCc
Confidence            999998872 1           0                  1334556667799988876543

>PRK08263 short chain dehydrogenase; Provisional

Probab=97.86  E-value=0.00014  Score=55.12  Aligned_cols=79  Identities=23%  Similarity=0.246  Sum_probs=54.2

Q ss_pred             CCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCC-e--eEecCCCccHHHHHHhHC--CCCccEEE
Q 028523           19 GEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFD-E--AFNYKEEPDLDAALKRYF--PEGINIYF   93 (208)
Q Consensus        19 g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~-~--v~~~~~~~~~~~~~~~~~--~~~~d~v~   93 (208)
                      +.++||+||+|++|..+++.+...|++|+.+++++++.+.+.+.++.. .  ..|..+...+...+....  -+++|.+|
T Consensus         3 ~k~vlItGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~vi   82 (275)
T PRK08263          3 EKVWFITGASRGFGRAWTEAALERGDRVVATARDTATLADLAEKYGDRLLPLALDVTDRAAVFAAVETAVEHFGRLDIVV   82 (275)
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhccCCeeEEEccCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence            468999999999999999888888999999999988776665344322 1  234433313333333221  13689999


Q ss_pred             eCCC
Q 028523           94 ENVG   97 (208)
Q Consensus        94 d~~g   97 (208)
                      .+.|
T Consensus        83 ~~ag   86 (275)
T PRK08263         83 NNAG   86 (275)
T ss_pred             ECCC
Confidence            9987

>PRK06179 short chain dehydrogenase; Provisional

Probab=97.86  E-value=5.7e-05  Score=56.92  Aligned_cols=78  Identities=17%  Similarity=0.343  Sum_probs=53.7

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCC-eeEecCCCccHHHHHHhHCC--CCccEEEe
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFD-EAFNYKEEPDLDAALKRYFP--EGINIYFE   94 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~-~v~~~~~~~~~~~~~~~~~~--~~~d~v~d   94 (208)
                      .+.+++|+||+|++|...++.+...|++|+++++++++.+...   +.. ...|..+..++...+.....  +++|++|+
T Consensus         3 ~~~~vlVtGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~---~~~~~~~D~~d~~~~~~~~~~~~~~~g~~d~li~   79 (270)
T PRK06179          3 NSKVALVTGASSGIGRATAEKLARAGYRVFGTSRNPARAAPIP---GVELLELDVTDDASVQAAVDEVIARAGRIDVLVN   79 (270)
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCChhhccccC---CCeeEEeecCCHHHHHHHHHHHHHhCCCCCEEEE
Confidence            3568999999999999999888888999999998876543221   222 23455554234444443322  36999999


Q ss_pred             CCCc
Q 028523           95 NVGG   98 (208)
Q Consensus        95 ~~g~   98 (208)
                      +.|.
T Consensus        80 ~ag~   83 (270)
T PRK06179         80 NAGV   83 (270)
T ss_pred             CCCC
Confidence            9883

>PRK06181 short chain dehydrogenase; Provisional

Probab=97.85  E-value=0.0001  Score=55.34  Aligned_cols=79  Identities=19%  Similarity=0.324  Sum_probs=52.8

Q ss_pred             CCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHh---cCCCe---eEecCCCccHHHHHHhHCC--CCcc
Q 028523           19 GEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNK---FGFDE---AFNYKEEPDLDAALKRYFP--EGIN   90 (208)
Q Consensus        19 g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~---~g~~~---v~~~~~~~~~~~~~~~~~~--~~~d   90 (208)
                      +.++||+||+|++|..+++.+...|++|+.+++++++.+.+.+.   .+...   ..|..+...+...+.....  +++|
T Consensus         1 ~~~vlVtGasg~iG~~la~~l~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id   80 (263)
T PRK06181          1 GKVVIITGASEGIGRALAVRLARAGAQLVLAARNETRLASLAQELADHGGEALVVPTDVSDAEACERLIEAAVARFGGID   80 (263)
T ss_pred             CCEEEEecCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence            35799999999999999998888999999999987765544322   23221   2344433233333333321  2689


Q ss_pred             EEEeCCC
Q 028523           91 IYFENVG   97 (208)
Q Consensus        91 ~v~d~~g   97 (208)
                      .+|.+.|
T Consensus        81 ~vi~~ag   87 (263)
T PRK06181         81 ILVNNAG   87 (263)
T ss_pred             EEEECCC
Confidence            9999986

>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=97.85  E-value=0.00013  Score=54.46  Aligned_cols=79  Identities=16%  Similarity=0.270  Sum_probs=52.8

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHH--HHHHHHhcCCCe---eEecCCCccHHHHHHhHCC--CCcc
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDK--VDLLKNKFGFDE---AFNYKEEPDLDAALKRYFP--EGIN   90 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~--~~~~~~~~g~~~---v~~~~~~~~~~~~~~~~~~--~~~d   90 (208)
                      +|.+++|+||++++|.+.++.+...|++|+++.+++..  .+.++ +.+...   ..|..+..++.+.+.+...  +++|
T Consensus         7 ~~k~~lItGas~gIG~aia~~l~~~G~~vv~~~~~~~~~~~~~~~-~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~iD   85 (251)
T PRK12481          7 NGKVAIITGCNTGLGQGMAIGLAKAGADIVGVGVAEAPETQAQVE-ALGRKFHFITADLIQQKDIDSIVSQAVEVMGHID   85 (251)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCchHHHHHHHHH-HcCCeEEEEEeCCCCHHHHHHHHHHHHHHcCCCC
Confidence            57899999999999999999988899999988865432  22233 444321   2455444234333433321  3699


Q ss_pred             EEEeCCC
Q 028523           91 IYFENVG   97 (208)
Q Consensus        91 ~v~d~~g   97 (208)
                      +++++.|
T Consensus        86 ~lv~~ag   92 (251)
T PRK12481         86 ILINNAG   92 (251)
T ss_pred             EEEECCC
Confidence            9999887

>PRK07035 short chain dehydrogenase; Provisional

Probab=97.85  E-value=0.00011  Score=54.81  Aligned_cols=80  Identities=21%  Similarity=0.313  Sum_probs=53.9

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhc---CCC-e--eEecCCCccHHHHHHhHCC--CCc
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKF---GFD-E--AFNYKEEPDLDAALKRYFP--EGI   89 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~---g~~-~--v~~~~~~~~~~~~~~~~~~--~~~   89 (208)
                      .+.+++|+||+|++|...++.+...|++|+.++++.++.+.+.+++   +.. .  ..|..+..+....+.+...  +++
T Consensus         7 ~~k~vlItGas~gIG~~l~~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   86 (252)
T PRK07035          7 TGKIALVTGASRGIGEAIAKLLAQQGAHVIVSSRKLDGCQAVADAIVAAGGKAEALACHIGEMEQIDALFAHIRERHGRL   86 (252)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            3578999999999999999999889999999998877665544332   321 1  2344433223333333222  258


Q ss_pred             cEEEeCCC
Q 028523           90 NIYFENVG   97 (208)
Q Consensus        90 d~v~d~~g   97 (208)
                      |+++++.|
T Consensus        87 d~li~~ag   94 (252)
T PRK07035         87 DILVNNAA   94 (252)
T ss_pred             CEEEECCC
Confidence            99998887

>PRK05875 short chain dehydrogenase; Provisional

Probab=97.85  E-value=0.00014  Score=54.95  Aligned_cols=80  Identities=14%  Similarity=0.106  Sum_probs=53.6

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcC-----CC-ee--EecCCCccHHHHHHhHCC--C
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFG-----FD-EA--FNYKEEPDLDAALKRYFP--E   87 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g-----~~-~v--~~~~~~~~~~~~~~~~~~--~   87 (208)
                      ++.++||+|++|++|...++.+...|++|+.+++++++.+...+++.     .. .+  .|..+..++...+.+...  +
T Consensus         6 ~~k~vlItGasg~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   85 (276)
T PRK05875          6 QDRTYLVTGGGSGIGKGVAAGLVAAGAAVMIVGRNPDKLAAAAEEIEALKGAGAVRYEPADVTDEDQVARAVDAATAWHG   85 (276)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhccCCCceEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            46899999999999999999998899999999988776544432321     11 12  244333233333333322  3


Q ss_pred             CccEEEeCCC
Q 028523           88 GINIYFENVG   97 (208)
Q Consensus        88 ~~d~v~d~~g   97 (208)
                      ++|++|.+.|
T Consensus        86 ~~d~li~~ag   95 (276)
T PRK05875         86 RLHGVVHCAG   95 (276)
T ss_pred             CCCEEEECCC
Confidence            6899999887

>PRK12937 short chain dehydrogenase; Provisional

Probab=97.84  E-value=0.00034  Score=51.79  Aligned_cols=104  Identities=16%  Similarity=0.107  Sum_probs=63.6

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHH-HHHHHHH---hcCCC-ee--EecCCCccHHHHHHhHC--CCC
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKD-KVDLLKN---KFGFD-EA--FNYKEEPDLDAALKRYF--PEG   88 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~-~~~~~~~---~~g~~-~v--~~~~~~~~~~~~~~~~~--~~~   88 (208)
                      ++.+++|+||+|++|...++.+...|++++.+.++.. ..+.+.+   +.+.. ..  .|..+...+.+.+.+..  -++
T Consensus         4 ~~~~vlItG~~~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   83 (245)
T PRK12937          4 SNKVAIVTGASRGIGAAIARRLAADGFAVAVNYAGSAAAADELVAEIEAAGGRAIAVQADVADAAAVTRLFDAAETAFGR   83 (245)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            4678999999999999999999889999888776533 2222221   23332 12  23333322333333321  136


Q ss_pred             ccEEEeCCCch-----------h---------------HHHHHHhhccCCEEEEEeccc
Q 028523           89 INIYFENVGGK-----------M---------------LDAVLLNMRIQGRITLCGMIS  121 (208)
Q Consensus        89 ~d~v~d~~g~~-----------~---------------~~~~~~~l~~~G~~v~~g~~~  121 (208)
                      +|++|.+.|..           .               ...+++.++.+|+++.++...
T Consensus        84 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~ss~~  142 (245)
T PRK12937         84 IDVLVNNAGVMPLGTIADFDLEDFDRTIATNLRGAFVVLREAARHLGQGGRIINLSTSV  142 (245)
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHHhccCcEEEEEeecc
Confidence            89999988731           0               223445556678999887644

>PRK07454 short chain dehydrogenase; Provisional

Probab=97.84  E-value=0.00013  Score=53.95  Aligned_cols=81  Identities=14%  Similarity=0.246  Sum_probs=54.6

Q ss_pred             CCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhc---CCC-e--eEecCCCccHHHHHHhHCC--CC
Q 028523           17 KQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKF---GFD-E--AFNYKEEPDLDAALKRYFP--EG   88 (208)
Q Consensus        17 ~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~---g~~-~--v~~~~~~~~~~~~~~~~~~--~~   88 (208)
                      .++.+++|+||+|++|..+++.+...|++|+++++++++.+.+.+.+   +.. .  ..|..+.++....+.....  ++
T Consensus         4 ~~~k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   83 (241)
T PRK07454          4 NSMPRALITGASSGIGKATALAFAKAGWDLALVARSQDALEALAAELRSTGVKAAAYSIDLSNPEAIAPGIAELLEQFGC   83 (241)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhCCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            45678999999999999999999889999999999887765554222   221 1  2344433223333333221  26


Q ss_pred             ccEEEeCCC
Q 028523           89 INIYFENVG   97 (208)
Q Consensus        89 ~d~v~d~~g   97 (208)
                      +|.++.+.|
T Consensus        84 id~lv~~ag   92 (241)
T PRK07454         84 PDVLINNAG   92 (241)
T ss_pred             CCEEEECCC
Confidence            999999887

>PRK07985 oxidoreductase; Provisional

Probab=97.84  E-value=0.00023  Score=54.45  Aligned_cols=105  Identities=12%  Similarity=0.093  Sum_probs=65.2

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCH--HHHHHHHH---hcCCCe---eEecCCCccHHHHHHhHCC--C
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSK--DKVDLLKN---KFGFDE---AFNYKEEPDLDAALKRYFP--E   87 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~--~~~~~~~~---~~g~~~---v~~~~~~~~~~~~~~~~~~--~   87 (208)
                      ++.+++|+||++++|...++.+...|++|+++.++.  +..+.+.+   +.|...   ..|..+.+.+...+.+...  +
T Consensus        48 ~~k~vlITGas~gIG~aia~~L~~~G~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g  127 (294)
T PRK07985         48 KDRKALVTGGDSGIGRAAAIAYAREGADVAISYLPVEEEDAQDVKKIIEECGRKAVLLPGDLSDEKFARSLVHEAHKALG  127 (294)
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHCCCEEEEecCCcchhhHHHHHHHHHHcCCeEEEEEccCCCHHHHHHHHHHHHHHhC
Confidence            457899999999999999998888899999877542  23333321   233321   2344443233333333322  3


Q ss_pred             CccEEEeCCCc-h--------------------------hHHHHHHhhccCCEEEEEecccc
Q 028523           88 GINIYFENVGG-K--------------------------MLDAVLLNMRIQGRITLCGMISQ  122 (208)
Q Consensus        88 ~~d~v~d~~g~-~--------------------------~~~~~~~~l~~~G~~v~~g~~~~  122 (208)
                      ++|+++.+.|. .                          ....+++.|+.+|+++.++....
T Consensus       128 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~iv~iSS~~~  189 (294)
T PRK07985        128 GLDIMALVAGKQVAIPDIADLTSEQFQKTFAINVFALFWLTQEAIPLLPKGASIITTSSIQA  189 (294)
T ss_pred             CCCEEEECCCCCcCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhcCCEEEEECCchh
Confidence            68999988762 1                          02344455667899999877543

>PRK06720 hypothetical protein; Provisional

Probab=97.83  E-value=0.00021  Score=50.03  Aligned_cols=80  Identities=14%  Similarity=0.255  Sum_probs=51.9

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHh---cCCCe-e--EecCCCccHHHHHHhHC--CCCc
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNK---FGFDE-A--FNYKEEPDLDAALKRYF--PEGI   89 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~---~g~~~-v--~~~~~~~~~~~~~~~~~--~~~~   89 (208)
                      ++..++|+||++++|...+..+...|++|++++++++..+...++   .+... .  .|..+..++.+.+.+..  -+++
T Consensus        15 ~gk~~lVTGa~~GIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~v~~~~~~~G~i   94 (169)
T PRK06720         15 AGKVAIVTGGGIGIGRNTALLLAKQGAKVIVTDIDQESGQATVEEITNLGGEALFVSYDMEKQGDWQRVISITLNAFSRI   94 (169)
T ss_pred             CCCEEEEecCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            578999999999999999988888899999999887765443223   24321 2  23332212222222211  1368


Q ss_pred             cEEEeCCC
Q 028523           90 NIYFENVG   97 (208)
Q Consensus        90 d~v~d~~g   97 (208)
                      |+++++.|
T Consensus        95 DilVnnAG  102 (169)
T PRK06720         95 DMLFQNAG  102 (169)
T ss_pred             CEEEECCC
Confidence            99998887

>PRK06172 short chain dehydrogenase; Provisional

Probab=97.83  E-value=9.8e-05  Score=55.07  Aligned_cols=80  Identities=15%  Similarity=0.206  Sum_probs=53.5

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH---hcCCC-e--eEecCCCccHHHHHHhHC--CCCc
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKN---KFGFD-E--AFNYKEEPDLDAALKRYF--PEGI   89 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~---~~g~~-~--v~~~~~~~~~~~~~~~~~--~~~~   89 (208)
                      ++.+++|+||+|++|...++.+...|++|+.+++++++.+.+.+   +.+.. .  ..|..+..++...+.+..  -+++
T Consensus         6 ~~k~ilItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~i   85 (253)
T PRK06172          6 SGKVALVTGGAAGIGRATALAFAREGAKVVVADRDAAGGEETVALIREAGGEALFVACDVTRDAEVKALVEQTIAAYGRL   85 (253)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHhCCC
Confidence            46899999999999999998888889999999999876554432   23322 1  234433312333333221  1368


Q ss_pred             cEEEeCCC
Q 028523           90 NIYFENVG   97 (208)
Q Consensus        90 d~v~d~~g   97 (208)
                      |+++.+.|
T Consensus        86 d~li~~ag   93 (253)
T PRK06172         86 DYAFNNAG   93 (253)
T ss_pred             CEEEECCC
Confidence            99999887

>PRK08277 D-mannonate oxidoreductase; Provisional

Probab=97.83  E-value=0.00015  Score=54.99  Aligned_cols=80  Identities=14%  Similarity=0.250  Sum_probs=54.0

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhc---CCC-e--eEecCCCccHHHHHHhHCC--CCc
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKF---GFD-E--AFNYKEEPDLDAALKRYFP--EGI   89 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~---g~~-~--v~~~~~~~~~~~~~~~~~~--~~~   89 (208)
                      ++.+++|+||+|++|...++.+...|++|+++++++++.+.+.+++   +.. .  ..|..+...+...+.+...  +++
T Consensus         9 ~~k~vlVtGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~i   88 (278)
T PRK08277          9 KGKVAVITGGGGVLGGAMAKELARAGAKVAILDRNQEKAEAVVAEIKAAGGEALAVKADVLDKESLEQARQQILEDFGPC   88 (278)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence            4788999999999999999998889999999998877655443232   322 1  2334333123333333221  369


Q ss_pred             cEEEeCCC
Q 028523           90 NIYFENVG   97 (208)
Q Consensus        90 d~v~d~~g   97 (208)
                      |++|.+.|
T Consensus        89 d~li~~ag   96 (278)
T PRK08277         89 DILINGAG   96 (278)
T ss_pred             CEEEECCC
Confidence            99999877

>PRK08703 short chain dehydrogenase; Provisional

Probab=97.83  E-value=0.00022  Score=52.71  Aligned_cols=80  Identities=16%  Similarity=0.260  Sum_probs=53.7

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhc---CC-C---eeEecCCC--cc---HHHHHHhHC
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKF---GF-D---EAFNYKEE--PD---LDAALKRYF   85 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~---g~-~---~v~~~~~~--~~---~~~~~~~~~   85 (208)
                      ++.+++|+||+|++|...++.+...|++|+++++++++.+.+.+++   +. .   ..+|..+.  .+   +.+.+.+..
T Consensus         5 ~~k~vlItG~sggiG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~i~~~~   84 (239)
T PRK08703          5 SDKTILVTGASQGLGEQVAKAYAAAGATVILVARHQKKLEKVYDAIVEAGHPEPFAIRFDLMSAEEKEFEQFAATIAEAT   84 (239)
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCChHHHHHHHHHHHHcCCCCcceEEeeecccchHHHHHHHHHHHHHh
Confidence            4679999999999999999888888999999999988765543332   21 1   12333221  02   222333333


Q ss_pred             CCCccEEEeCCC
Q 028523           86 PEGINIYFENVG   97 (208)
Q Consensus        86 ~~~~d~v~d~~g   97 (208)
                      .+.+|.+|.+.|
T Consensus        85 ~~~id~vi~~ag   96 (239)
T PRK08703         85 QGKLDGIVHCAG   96 (239)
T ss_pred             CCCCCEEEEecc
Confidence            246899999887

>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=97.83  E-value=4.9e-05  Score=61.71  Aligned_cols=93  Identities=16%  Similarity=0.145  Sum_probs=63.6

Q ss_pred             cCCCCCCEEE----EecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCC-eeEecCCCccHHHHHHhHCCCC
Q 028523           14 CSPKQGEYVF----VSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFD-EAFNYKEEPDLDAALKRYFPEG   88 (208)
Q Consensus        14 ~~~~~g~~vl----i~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~-~v~~~~~~~~~~~~~~~~~~~~   88 (208)
                      .++++|+.+|    |+||+|++|.+++|+++..|++|+.+.+++.+....+ ..+.. .++|.+.. ...+.+...    
T Consensus        29 ~~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~g~~v~~~~~~~~~~~~~~-~~~~~~~~~d~~~~-~~~~~l~~~----  102 (450)
T PRK08261         29 RRYRPGQPLLDGPVLVGGAGRLAEALAALLAGLGYDVVANNDGGLTWAAGW-GDRFGALVFDATGI-TDPADLKAL----  102 (450)
T ss_pred             cCCCCCCCCCCCceEEccCchhHHHHHHHHhhCCCeeeecCccccccccCc-CCcccEEEEECCCC-CCHHHHHHH----
Confidence            4667899988    9999999999999999999999999886655333222 23333 35555544 333333221    


Q ss_pred             ccEEEeCCCchhHHHHHHhhccCCEEEEEeccc
Q 028523           89 INIYFENVGGKMLDAVLLNMRIQGRITLCGMIS  121 (208)
Q Consensus        89 ~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~  121 (208)
                               ...+...++.|.++|+++.++...
T Consensus       103 ---------~~~~~~~l~~l~~~griv~i~s~~  126 (450)
T PRK08261        103 ---------YEFFHPVLRSLAPCGRVVVLGRPP  126 (450)
T ss_pred             ---------HHHHHHHHHhccCCCEEEEEcccc
Confidence                     134566777888888888887654

>PRK04148 hypothetical protein; Provisional

Probab=97.82  E-value=0.00029  Score=46.95  Aligned_cols=51  Identities=18%  Similarity=0.121  Sum_probs=39.4

Q ss_pred             CCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCee
Q 028523           15 SPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEA   68 (208)
Q Consensus        15 ~~~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~v   68 (208)
                      ...++.++++.|. | .|...++.+...|.+|++++.+++..+.++ +.+...+
T Consensus        13 ~~~~~~kileIG~-G-fG~~vA~~L~~~G~~ViaIDi~~~aV~~a~-~~~~~~v   63 (134)
T PRK04148         13 EKGKNKKIVELGI-G-FYFKVAKKLKESGFDVIVIDINEKAVEKAK-KLGLNAF   63 (134)
T ss_pred             ccccCCEEEEEEe-c-CCHHHHHHHHHCCCEEEEEECCHHHHHHHH-HhCCeEE
Confidence            3445788999994 6 787666666678999999999999988888 6665443

>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=97.82  E-value=0.00011  Score=54.30  Aligned_cols=80  Identities=19%  Similarity=0.297  Sum_probs=53.1

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhc---CCC-e--eEecCCCccHHHHHHhHCC--CCc
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKF---GFD-E--AFNYKEEPDLDAALKRYFP--EGI   89 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~---g~~-~--v~~~~~~~~~~~~~~~~~~--~~~   89 (208)
                      .+.+++|+|++|++|...+..+...|++|+++++++++.+.+.+++   +.. .  ..|..+...+.+.+++...  +++
T Consensus         6 ~~~~vlVtG~sg~iG~~l~~~L~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   85 (239)
T PRK07666          6 QGKNALITGAGRGIGRAVAIALAKEGVNVGLLARTEENLKAVAEEVEAYGVKVVIATADVSDYEEVTAAIEQLKNELGSI   85 (239)
T ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCeEEEEECCCCCHHHHHHHHHHHHHHcCCc
Confidence            3678999999999999999888888999999999877655443222   221 1  2233333133333333321  269


Q ss_pred             cEEEeCCC
Q 028523           90 NIYFENVG   97 (208)
Q Consensus        90 d~v~d~~g   97 (208)
                      |.+|.+.|
T Consensus        86 d~vi~~ag   93 (239)
T PRK07666         86 DILINNAG   93 (239)
T ss_pred             cEEEEcCc
Confidence            99999886

>PRK06125 short chain dehydrogenase; Provisional

Probab=97.81  E-value=0.00022  Score=53.47  Aligned_cols=78  Identities=21%  Similarity=0.341  Sum_probs=53.5

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhc----CCC-ee--EecCCCccHHHHHHhHCCCCcc
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKF----GFD-EA--FNYKEEPDLDAALKRYFPEGIN   90 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~----g~~-~v--~~~~~~~~~~~~~~~~~~~~~d   90 (208)
                      ++.+++|+|+++++|...++.+...|++|+++++++++.+.+.+++    +.. ..  .|..+...+.+.+...  +++|
T Consensus         6 ~~k~vlItG~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~--g~id   83 (259)
T PRK06125          6 AGKRVLITGASKGIGAAAAEAFAAEGCHLHLVARDADALEALAADLRAAHGVDVAVHALDLSSPEAREQLAAEA--GDID   83 (259)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHHh--CCCC
Confidence            4789999999999999999988889999999999888766544333    221 12  3333331232223221  3699


Q ss_pred             EEEeCCC
Q 028523           91 IYFENVG   97 (208)
Q Consensus        91 ~v~d~~g   97 (208)
                      ++|++.|
T Consensus        84 ~lv~~ag   90 (259)
T PRK06125         84 ILVNNAG   90 (259)
T ss_pred             EEEECCC
Confidence            9999887

>KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism]

Probab=97.81  E-value=0.00011  Score=55.06  Aligned_cols=78  Identities=18%  Similarity=0.284  Sum_probs=53.9

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHH----HHHHhcCC--CeeEecCCCccHHH---HHHhHCCCC
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVD----LLKNKFGF--DEAFNYKEEPDLDA---ALKRYFPEG   88 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~----~~~~~~g~--~~v~~~~~~~~~~~---~~~~~~~~~   88 (208)
                      +|+.|||+||++|+|.+.++=....|++++..+.+.+...    .++ +.|-  ..+.|.++.++...   ++++-.+ .
T Consensus        37 ~g~~vLITGgg~GlGr~ialefa~rg~~~vl~Din~~~~~etv~~~~-~~g~~~~y~cdis~~eei~~~a~~Vk~e~G-~  114 (300)
T KOG1201|consen   37 SGEIVLITGGGSGLGRLIALEFAKRGAKLVLWDINKQGNEETVKEIR-KIGEAKAYTCDISDREEIYRLAKKVKKEVG-D  114 (300)
T ss_pred             cCCEEEEeCCCchHHHHHHHHHHHhCCeEEEEeccccchHHHHHHHH-hcCceeEEEecCCCHHHHHHHHHHHHHhcC-C
Confidence            6899999999999999888777778888888887766443    333 3342  23566665434333   3333333 6


Q ss_pred             ccEEEeCCC
Q 028523           89 INIYFENVG   97 (208)
Q Consensus        89 ~d~v~d~~g   97 (208)
                      +|++++.+|
T Consensus       115 V~ILVNNAG  123 (300)
T KOG1201|consen  115 VDILVNNAG  123 (300)
T ss_pred             ceEEEeccc
Confidence            999999887

>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional

Probab=97.80  E-value=0.00012  Score=54.90  Aligned_cols=80  Identities=18%  Similarity=0.274  Sum_probs=53.7

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHh---cCCCe---eEecCCCccHHHHHHhHC--CCCc
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNK---FGFDE---AFNYKEEPDLDAALKRYF--PEGI   89 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~---~g~~~---v~~~~~~~~~~~~~~~~~--~~~~   89 (208)
                      ++.++||+||+|++|..+++.+...|++|+++++++++.+.+.++   .+...   ..|..+...+.+.+....  .+++
T Consensus         6 ~~~~vlItGasg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~   85 (262)
T PRK13394          6 NGKTAVVTGAASGIGKEIALELARAGAAVAIADLNQDGANAVADEINKAGGKAIGVAMDVTNEDAVNAGIDKVAERFGSV   85 (262)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHhcCceEEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence            478999999999999999999988999999999988765544323   34322   124333312333333221  1368


Q ss_pred             cEEEeCCC
Q 028523           90 NIYFENVG   97 (208)
Q Consensus        90 d~v~d~~g   97 (208)
                      |++|.+.|
T Consensus        86 d~vi~~ag   93 (262)
T PRK13394         86 DILVSNAG   93 (262)
T ss_pred             CEEEECCc
Confidence            99999887

>PRK07074 short chain dehydrogenase; Provisional

Probab=97.80  E-value=0.0002  Score=53.51  Aligned_cols=79  Identities=19%  Similarity=0.252  Sum_probs=53.4

Q ss_pred             CCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCC--e--eEecCCCccHHHHHHhHCC--CCccEE
Q 028523           19 GEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFD--E--AFNYKEEPDLDAALKRYFP--EGINIY   92 (208)
Q Consensus        19 g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~--~--v~~~~~~~~~~~~~~~~~~--~~~d~v   92 (208)
                      +.+++|+||+|++|...+..+...|++|+++++++++.+.+.+.+...  .  ..|..+...+...+.+...  +++|.+
T Consensus         2 ~k~ilItGat~~iG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~v   81 (257)
T PRK07074          2 KRTALVTGAAGGIGQALARRFLAAGDRVLALDIDAAALAAFADALGDARFVPVACDLTDAASLAAALANAAAERGPVDVL   81 (257)
T ss_pred             CCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            468999999999999999888888999999999888766555344211  1  2344433122223332211  268999


Q ss_pred             EeCCC
Q 028523           93 FENVG   97 (208)
Q Consensus        93 ~d~~g   97 (208)
                      +.+.|
T Consensus        82 i~~ag   86 (257)
T PRK07074         82 VANAG   86 (257)
T ss_pred             EECCC
Confidence            99987

>TIGR01289 LPOR light-dependent protochlorophyllide reductase

Probab=97.80  E-value=0.00018  Score=55.63  Aligned_cols=79  Identities=11%  Similarity=0.157  Sum_probs=54.5

Q ss_pred             CCEEEEecCCchHHHHHHHHHHHcC-CEEEEEeCCHHHHHHHHHhcCCC----e--eEecCCCccHHHHHHhHC--CCCc
Q 028523           19 GEYVFVSAASGAVGQLVGQFAKLVG-CYVVGSAGSKDKVDLLKNKFGFD----E--AFNYKEEPDLDAALKRYF--PEGI   89 (208)
Q Consensus        19 g~~vli~ga~g~vG~~a~qla~~~g-~~v~~~~~s~~~~~~~~~~~g~~----~--v~~~~~~~~~~~~~~~~~--~~~~   89 (208)
                      +.+++|+||++++|...++.+...| ++|+.+++++++.+.+.++++..    .  ..|..+..+....+.+..  .+++
T Consensus         3 ~k~vlITGas~GIG~aia~~L~~~G~~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~i   82 (314)
T TIGR01289         3 KPTVIITGASSGLGLYAAKALAATGEWHVIMACRDFLKAEQAAKSLGMPKDSYTIMHLDLGSLDSVRQFVQQFRESGRPL   82 (314)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEEcCCCCHHHHHHHHHHHHHhCCCC
Confidence            5689999999999999988888889 89999999888766555455321    1  234444323333333332  2369


Q ss_pred             cEEEeCCC
Q 028523           90 NIYFENVG   97 (208)
Q Consensus        90 d~v~d~~g   97 (208)
                      |++|++.|
T Consensus        83 D~lI~nAG   90 (314)
T TIGR01289        83 DALVCNAA   90 (314)
T ss_pred             CEEEECCC
Confidence            99999876

This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form.

>KOG1210 consensus Predicted 3-ketosphinganine reductase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=97.80  E-value=0.00019  Score=54.12  Aligned_cols=84  Identities=20%  Similarity=0.213  Sum_probs=60.3

Q ss_pred             CCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCee---EecCCC--cc---HHHHHHhHC-
Q 028523           15 SPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEA---FNYKEE--PD---LDAALKRYF-   85 (208)
Q Consensus        15 ~~~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~v---~~~~~~--~~---~~~~~~~~~-   85 (208)
                      +.++..+|+|+|+|+++|++.+.-++..|++|.++.++.+++..+++.++....   +.+...  .+   ....++... 
T Consensus        29 ~~k~~~hi~itggS~glgl~la~e~~~~ga~Vti~ar~~~kl~~a~~~l~l~~~~~~v~~~S~d~~~Y~~v~~~~~~l~~  108 (331)
T KOG1210|consen   29 KPKPRRHILITGGSSGLGLALALECKREGADVTITARSGKKLLEAKAELELLTQVEDVSYKSVDVIDYDSVSKVIEELRD  108 (331)
T ss_pred             ccCccceEEEecCcchhhHHHHHHHHHccCceEEEeccHHHHHHHHhhhhhhhccceeeEeccccccHHHHHHHHhhhhh
Confidence            345567999999999999999999999999999999999999988877765321   112211  01   222333332 


Q ss_pred             -CCCccEEEeCCCc
Q 028523           86 -PEGINIYFENVGG   98 (208)
Q Consensus        86 -~~~~d~v~d~~g~   98 (208)
                       .+.+|.+|.|.|.
T Consensus       109 ~~~~~d~l~~cAG~  122 (331)
T KOG1210|consen  109 LEGPIDNLFCCAGV  122 (331)
T ss_pred             ccCCcceEEEecCc
Confidence             2368999999984

>COG4122 Predicted O-methyltransferase [General function prediction only]

Probab=97.80  E-value=0.00087  Score=48.64  Aligned_cols=103  Identities=14%  Similarity=0.163  Sum_probs=74.8

Q ss_pred             HhcCCCCCCEEEEecCCchHHHHHHHHHHHcC--CEEEEEeCCHHHHHHHHH---hcCCCeeEecCC-CccHHHHHHhHC
Q 028523           12 EVCSPKQGEYVFVSAASGAVGQLVGQFAKLVG--CYVVGSAGSKDKVDLLKN---KFGFDEAFNYKE-EPDLDAALKRYF   85 (208)
Q Consensus        12 ~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g--~~v~~~~~s~~~~~~~~~---~~g~~~v~~~~~-~~~~~~~~~~~~   85 (208)
                      ..++.....+||=+|  +.+|..++.+|..+.  .+++.+.+++++.+.+++   +.|.+..+.--. . +..+.+.+..
T Consensus        53 ~L~~~~~~k~iLEiG--T~~GySal~mA~~l~~~g~l~tiE~~~e~~~~A~~n~~~ag~~~~i~~~~~g-dal~~l~~~~  129 (219)
T COG4122          53 LLARLSGPKRILEIG--TAIGYSALWMALALPDDGRLTTIERDEERAEIARENLAEAGVDDRIELLLGG-DALDVLSRLL  129 (219)
T ss_pred             HHHHhcCCceEEEee--cccCHHHHHHHhhCCCCCeEEEEeCCHHHHHHHHHHHHHcCCcceEEEEecC-cHHHHHHhcc
Confidence            345667888899888  678999999999886  489999999998877764   456654221111 3 5556666533


Q ss_pred             CCCccEEEeCCC-c---hhHHHHHHhhccCCEEEEE
Q 028523           86 PEGINIYFENVG-G---KMLDAVLLNMRIQGRITLC  117 (208)
Q Consensus        86 ~~~~d~v~d~~g-~---~~~~~~~~~l~~~G~~v~~  117 (208)
                      .+.||.||-=.. +   +.++.+++.|++||-++.-
T Consensus       130 ~~~fDliFIDadK~~yp~~le~~~~lLr~GGliv~D  165 (219)
T COG4122         130 DGSFDLVFIDADKADYPEYLERALPLLRPGGLIVAD  165 (219)
T ss_pred             CCCccEEEEeCChhhCHHHHHHHHHHhCCCcEEEEe
Confidence            458999986554 2   3789999999999998763

>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=97.79  E-value=0.00021  Score=52.80  Aligned_cols=81  Identities=21%  Similarity=0.303  Sum_probs=54.4

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH---hcCCCe-e--EecCCCccHHHHHHhHCC--CCc
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKN---KFGFDE-A--FNYKEEPDLDAALKRYFP--EGI   89 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~---~~g~~~-v--~~~~~~~~~~~~~~~~~~--~~~   89 (208)
                      ++.++||+||+|++|...++.+...|.+|+++++++++.+.+.+   ..+... .  .|..+...+...+.....  +++
T Consensus         4 ~~~~ilItGasg~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   83 (246)
T PRK05653          4 QGKTALVTGASRGIGRAIALRLAADGAKVVIYDSNEEAAEALAAELRAAGGEARVLVFDVSDEAAVRALIEAAVEAFGAL   83 (246)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence            35789999999999999998888889999999998877554432   233322 2  344443233333333221  268


Q ss_pred             cEEEeCCCc
Q 028523           90 NIYFENVGG   98 (208)
Q Consensus        90 d~v~d~~g~   98 (208)
                      |.++.+.|.
T Consensus        84 d~vi~~ag~   92 (246)
T PRK05653         84 DILVNNAGI   92 (246)
T ss_pred             CEEEECCCc
Confidence            999998863

>PRK06603 enoyl-(acyl carrier protein) reductase; Provisional

Probab=97.79  E-value=0.0002  Score=53.79  Aligned_cols=80  Identities=13%  Similarity=0.199  Sum_probs=52.5

Q ss_pred             CCCEEEEecCCc--hHHHHHHHHHHHcCCEEEEEeCCHH---HHHHHHHhcCCCe--eEecCCCccHHHHHHhHCC--CC
Q 028523           18 QGEYVFVSAASG--AVGQLVGQFAKLVGCYVVGSAGSKD---KVDLLKNKFGFDE--AFNYKEEPDLDAALKRYFP--EG   88 (208)
Q Consensus        18 ~g~~vli~ga~g--~vG~~a~qla~~~g~~v~~~~~s~~---~~~~~~~~~g~~~--v~~~~~~~~~~~~~~~~~~--~~   88 (208)
                      .|..++|+||++  ++|.+.++.+...|++|+.++++++   ..+.+.+++|...  ..|..+..+..+.+.+...  ++
T Consensus         7 ~~k~~lITGas~~~GIG~a~a~~la~~G~~v~~~~r~~~~~~~~~~l~~~~g~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   86 (260)
T PRK06603          7 QGKKGLITGIANNMSISWAIAQLAKKHGAELWFTYQSEVLEKRVKPLAEEIGCNFVSELDVTNPKSISNLFDDIKEKWGS   86 (260)
T ss_pred             CCcEEEEECCCCCcchHHHHHHHHHHcCCEEEEEeCchHHHHHHHHHHHhcCCceEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            578899999987  8999999888888999999887642   2233332334322  2455554234444443322  36


Q ss_pred             ccEEEeCCC
Q 028523           89 INIYFENVG   97 (208)
Q Consensus        89 ~d~v~d~~g   97 (208)
                      +|+++++.|
T Consensus        87 iDilVnnag   95 (260)
T PRK06603         87 FDFLLHGMA   95 (260)
T ss_pred             ccEEEEccc
Confidence            999999876

>PRK12747 short chain dehydrogenase; Provisional

Probab=97.78  E-value=0.00044  Score=51.56  Aligned_cols=105  Identities=18%  Similarity=0.226  Sum_probs=64.2

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEe-CCHHHHHHHHHhc---CCCe---eEecCCCccHHH---HHHh----
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSA-GSKDKVDLLKNKF---GFDE---AFNYKEEPDLDA---ALKR----   83 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~-~s~~~~~~~~~~~---g~~~---v~~~~~~~~~~~---~~~~----   83 (208)
                      .+.+++|+||++++|.+.++.+...|++|+++. +++++.+.+.+++   +...   ..|..+..+...   .+.+    
T Consensus         3 ~~k~~lItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   82 (252)
T PRK12747          3 KGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGGSAFSIGANLESLHGVEALYSSLDNELQN   82 (252)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHHHhcCCceEEEecccCCHHHHHHHHHHHHHHhhh
Confidence            468999999999999999999989999998864 4445443332122   2211   123332212222   2222    


Q ss_pred             HCC-CCccEEEeCCCc-h--h-----------------------HHHHHHhhccCCEEEEEecccc
Q 028523           84 YFP-EGINIYFENVGG-K--M-----------------------LDAVLLNMRIQGRITLCGMISQ  122 (208)
Q Consensus        84 ~~~-~~~d~v~d~~g~-~--~-----------------------~~~~~~~l~~~G~~v~~g~~~~  122 (208)
                      ..+ +++|+++++.|. .  .                       ...+++.|...|+++.++....
T Consensus        83 ~~g~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~g~iv~isS~~~  148 (252)
T PRK12747         83 RTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRDNSRIINISSAAT  148 (252)
T ss_pred             hcCCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHhhcCCeEEEECCccc
Confidence            112 269999998872 1  0                       1235556667799999887654

>PRK06114 short chain dehydrogenase; Provisional

Probab=97.78  E-value=0.00019  Score=53.66  Aligned_cols=80  Identities=21%  Similarity=0.213  Sum_probs=51.8

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHH-HHHHHHH---hcCCC-e--eEecCCCccHHHHHHhHCC--CC
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKD-KVDLLKN---KFGFD-E--AFNYKEEPDLDAALKRYFP--EG   88 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~-~~~~~~~---~~g~~-~--v~~~~~~~~~~~~~~~~~~--~~   88 (208)
                      ++.+++|+||++++|..+++.+...|++|++++++.+ ..+.+.+   ..+.. .  ..|..+.....+.+.+...  ++
T Consensus         7 ~~k~~lVtG~s~gIG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~   86 (254)
T PRK06114          7 DGQVAFVTGAGSGIGQRIAIGLAQAGADVALFDLRTDDGLAETAEHIEAAGRRAIQIAADVTSKADLRAAVARTEAELGA   86 (254)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            4679999999999999999999889999999987653 2222221   23322 1  2344333233333333222  36


Q ss_pred             ccEEEeCCC
Q 028523           89 INIYFENVG   97 (208)
Q Consensus        89 ~d~v~d~~g   97 (208)
                      +|++|++.|
T Consensus        87 id~li~~ag   95 (254)
T PRK06114         87 LTLAVNAAG   95 (254)
T ss_pred             CCEEEECCC
Confidence            899999987

>PRK08159 enoyl-(acyl carrier protein) reductase; Provisional

Probab=97.77  E-value=0.00019  Score=54.34  Aligned_cols=106  Identities=11%  Similarity=0.107  Sum_probs=67.9

Q ss_pred             CCCCCEEEEecCC--chHHHHHHHHHHHcCCEEEEEeCCH---HHHHHHHHhcCCCe--eEecCCCccHHHHHHhHCC--
Q 028523           16 PKQGEYVFVSAAS--GAVGQLVGQFAKLVGCYVVGSAGSK---DKVDLLKNKFGFDE--AFNYKEEPDLDAALKRYFP--   86 (208)
Q Consensus        16 ~~~g~~vli~ga~--g~vG~~a~qla~~~g~~v~~~~~s~---~~~~~~~~~~g~~~--v~~~~~~~~~~~~~~~~~~--   86 (208)
                      .-.+.++||+||+  +++|.+.++.+...|++|+.+.+++   ++.+.+.++++...  ..|..+..+..+.+.+...  
T Consensus         7 ~~~~k~~lItGas~~~GIG~aia~~la~~G~~V~l~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   86 (272)
T PRK08159          7 LMAGKRGLILGVANNRSIAWGIAKACRAAGAELAFTYQGDALKKRVEPLAAELGAFVAGHCDVTDEASIDAVFETLEKKW   86 (272)
T ss_pred             cccCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCchHHHHHHHHHHHhcCCceEEecCCCCHHHHHHHHHHHHHhc
Confidence            4467899999996  7999999998888999999887764   33344433555322  2344443233333333322  


Q ss_pred             CCccEEEeCCCc-h--------------h---------------HHHHHHhhccCCEEEEEeccc
Q 028523           87 EGINIYFENVGG-K--------------M---------------LDAVLLNMRIQGRITLCGMIS  121 (208)
Q Consensus        87 ~~~d~v~d~~g~-~--------------~---------------~~~~~~~l~~~G~~v~~g~~~  121 (208)
                      +++|+++++.|. .              .               ...+++.|..+|+++.++...
T Consensus        87 g~iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~g~Iv~iss~~  151 (272)
T PRK08159         87 GKLDFVVHAIGFSDKDELTGRYVDTSRDNFTMTMDISVYSFTAVAQRAEKLMTDGGSILTLTYYG  151 (272)
T ss_pred             CCCcEEEECCcccCccccccCcccCCHHHHHHHHhHHHHHHHHHHHHHHHhcCCCceEEEEeccc
Confidence            369999998862 1              0               133455666689998887654

>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed

Probab=97.77  E-value=0.00023  Score=52.67  Aligned_cols=80  Identities=23%  Similarity=0.369  Sum_probs=53.8

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCC-e--eEecCCCccHHHHHHhHC--CCCccEE
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFD-E--AFNYKEEPDLDAALKRYF--PEGINIY   92 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~-~--v~~~~~~~~~~~~~~~~~--~~~~d~v   92 (208)
                      ++.+++|+||+|++|...++.+...|+.|+...++.++.+.+.+.++.. .  ..|..+.+.+.+.+.+..  -+++|.+
T Consensus         5 ~~~~vlItGa~g~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~v   84 (245)
T PRK12936          5 SGRKALVTGASGGIGEEIARLLHAQGAIVGLHGTRVEKLEALAAELGERVKIFPANLSDRDEVKALGQKAEADLEGVDIL   84 (245)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            4678999999999999999888888999988888877766654345432 1  233333212222222221  1369999


Q ss_pred             EeCCC
Q 028523           93 FENVG   97 (208)
Q Consensus        93 ~d~~g   97 (208)
                      |.+.|
T Consensus        85 i~~ag   89 (245)
T PRK12936         85 VNNAG   89 (245)
T ss_pred             EECCC
Confidence            99987

>PRK06198 short chain dehydrogenase; Provisional

Probab=97.77  E-value=0.00016  Score=54.08  Aligned_cols=82  Identities=11%  Similarity=0.133  Sum_probs=54.2

Q ss_pred             CCCCEEEEecCCchHHHHHHHHHHHcCCE-EEEEeCCHHHHHHHHH---hcCCCe---eEecCCCccHHHHHHhHCC--C
Q 028523           17 KQGEYVFVSAASGAVGQLVGQFAKLVGCY-VVGSAGSKDKVDLLKN---KFGFDE---AFNYKEEPDLDAALKRYFP--E   87 (208)
Q Consensus        17 ~~g~~vli~ga~g~vG~~a~qla~~~g~~-v~~~~~s~~~~~~~~~---~~g~~~---v~~~~~~~~~~~~~~~~~~--~   87 (208)
                      -++.+++|+||+|++|..+++.+...|++ |+++++++++.+...+   ..+...   .+|..+.+.+.+.+.....  +
T Consensus         4 ~~~k~vlItGa~g~iG~~la~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   83 (260)
T PRK06198          4 LDGKVALVTGGTQGLGAAIARAFAERGAAGLVICGRNAEKGEAQAAELEALGAKAVFVQADLSDVEDCRRVVAAADEAFG   83 (260)
T ss_pred             CCCcEEEEeCCCchHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhC
Confidence            35788999999999999999999889997 9999988765543221   334321   2344443223333332211  2


Q ss_pred             CccEEEeCCCc
Q 028523           88 GINIYFENVGG   98 (208)
Q Consensus        88 ~~d~v~d~~g~   98 (208)
                      ++|.+|++.|.
T Consensus        84 ~id~li~~ag~   94 (260)
T PRK06198         84 RLDALVNAAGL   94 (260)
T ss_pred             CCCEEEECCCc
Confidence            69999999873

>PRK07791 short chain dehydrogenase; Provisional

Probab=97.77  E-value=0.00019  Score=54.73  Aligned_cols=81  Identities=16%  Similarity=0.215  Sum_probs=52.8

Q ss_pred             CCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCH---------HHHHHHHHhc---CCCe---eEecCCCccHHHHH
Q 028523           17 KQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSK---------DKVDLLKNKF---GFDE---AFNYKEEPDLDAAL   81 (208)
Q Consensus        17 ~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~---------~~~~~~~~~~---g~~~---v~~~~~~~~~~~~~   81 (208)
                      -++.+++|+||++++|...++.+...|++|++++++.         ++.+.+.+++   |...   ..|..+.++..+.+
T Consensus         4 l~~k~~lITGas~GIG~aia~~la~~G~~vii~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~   83 (286)
T PRK07791          4 LDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSASGGSAAQAVVDEIVAAGGEAVANGDDIADWDGAANLV   83 (286)
T ss_pred             cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEeeCCccccccccchhHHHHHHHHHHhcCCceEEEeCCCCCHHHHHHHH
Confidence            4678999999999999999988888999999887654         4333332233   3221   23444432333333


Q ss_pred             HhHCC--CCccEEEeCCC
Q 028523           82 KRYFP--EGINIYFENVG   97 (208)
Q Consensus        82 ~~~~~--~~~d~v~d~~g   97 (208)
                      .+...  +++|++|++.|
T Consensus        84 ~~~~~~~g~id~lv~nAG  101 (286)
T PRK07791         84 DAAVETFGGLDVLVNNAG  101 (286)
T ss_pred             HHHHHhcCCCCEEEECCC
Confidence            33322  36999999887

>COG2230 Cfa Cyclopropane fatty acid synthase and related methyltransferases [Cell envelope biogenesis, outer membrane]

Probab=97.77  E-value=0.00039  Score=52.25  Aligned_cols=108  Identities=19%  Similarity=0.242  Sum_probs=74.5

Q ss_pred             HHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH---hcCCCeeEecCCCccHHHHHH
Q 028523            6 AYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKN---KFGFDEAFNYKEEPDLDAALK   82 (208)
Q Consensus         6 A~~~l~~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~---~~g~~~v~~~~~~~~~~~~~~   82 (208)
                      ++..+.+..++++|+++|=+|  .|-|.+++-.|+..|++|++++-|+++.+.+++   +.|...-+...-. ++.+   
T Consensus        60 k~~~~~~kl~L~~G~~lLDiG--CGWG~l~~~aA~~y~v~V~GvTlS~~Q~~~~~~r~~~~gl~~~v~v~l~-d~rd---  133 (283)
T COG2230          60 KLDLILEKLGLKPGMTLLDIG--CGWGGLAIYAAEEYGVTVVGVTLSEEQLAYAEKRIAARGLEDNVEVRLQ-DYRD---  133 (283)
T ss_pred             HHHHHHHhcCCCCCCEEEEeC--CChhHHHHHHHHHcCCEEEEeeCCHHHHHHHHHHHHHcCCCcccEEEec-cccc---
Confidence            344555668999999999998  477999999999999999999999998887774   3344311100000 1111   


Q ss_pred             hHCCCCccEEE-----eCCCc----hhHHHHHHhhccCCEEEEEeccc
Q 028523           83 RYFPEGINIYF-----ENVGG----KMLDAVLLNMRIQGRITLCGMIS  121 (208)
Q Consensus        83 ~~~~~~~d~v~-----d~~g~----~~~~~~~~~l~~~G~~v~~g~~~  121 (208)
                       .. +.||.|+     +.+|.    ..+..+.+.|+++|++++.....
T Consensus       134 -~~-e~fDrIvSvgmfEhvg~~~~~~ff~~~~~~L~~~G~~llh~I~~  179 (283)
T COG2230         134 -FE-EPFDRIVSVGMFEHVGKENYDDFFKKVYALLKPGGRMLLHSITG  179 (283)
T ss_pred             -cc-cccceeeehhhHHHhCcccHHHHHHHHHhhcCCCceEEEEEecC
Confidence             11 1377664     44553    25788999999999998877654

>PRK08628 short chain dehydrogenase; Provisional

Probab=97.76  E-value=0.00018  Score=53.84  Aligned_cols=80  Identities=14%  Similarity=0.180  Sum_probs=53.3

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH--hcCCC-e--eEecCCCccHHHHHHhHCC--CCcc
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKN--KFGFD-E--AFNYKEEPDLDAALKRYFP--EGIN   90 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~--~~g~~-~--v~~~~~~~~~~~~~~~~~~--~~~d   90 (208)
                      +|.++||+||+|++|...++.+...|++|+++++++++.+...+  +.+.. .  ..|..+...+...+.+...  +++|
T Consensus         6 ~~~~ilItGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   85 (258)
T PRK08628          6 KDKVVIVTGGASGIGAAISLRLAEEGAIPVIFGRSAPDDEFAEELRALQPRAEFVQVDLTDDAQCRDAVEQTVAKFGRID   85 (258)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHcCCcEEEEcCChhhHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhcCCCC
Confidence            46799999999999999998888889999999988776533331  22332 1  2344433123333333222  3699


Q ss_pred             EEEeCCC
Q 028523           91 IYFENVG   97 (208)
Q Consensus        91 ~v~d~~g   97 (208)
                      ++|.+.|
T Consensus        86 ~vi~~ag   92 (258)
T PRK08628         86 GLVNNAG   92 (258)
T ss_pred             EEEECCc
Confidence            9999988

>PRK06124 gluconate 5-dehydrogenase; Provisional

Probab=97.76  E-value=0.00025  Score=52.98  Aligned_cols=80  Identities=21%  Similarity=0.299  Sum_probs=54.3

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHh---cCCC-e--eEecCCCccHHHHHHhHCC--CCc
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNK---FGFD-E--AFNYKEEPDLDAALKRYFP--EGI   89 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~---~g~~-~--v~~~~~~~~~~~~~~~~~~--~~~   89 (208)
                      ++.+++|+||++++|...++.+...|++|+.+.+++++.+.+.++   .+.. .  ..|..+..++...+.+...  +++
T Consensus        10 ~~k~ilItGas~~IG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   89 (256)
T PRK06124         10 AGQVALVTGSARGLGFEIARALAGAGAHVLVNGRNAATLEAAVAALRAAGGAAEALAFDIADEEAVAAAFARIDAEHGRL   89 (256)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhcCCC
Confidence            588999999999999999988888899999999987765544322   3321 1  2344443233333333322  368


Q ss_pred             cEEEeCCC
Q 028523           90 NIYFENVG   97 (208)
Q Consensus        90 d~v~d~~g   97 (208)
                      |.+|.+.|
T Consensus        90 d~vi~~ag   97 (256)
T PRK06124         90 DILVNNVG   97 (256)
T ss_pred             CEEEECCC
Confidence            99999887

>CHL00194 ycf39 Ycf39; Provisional

Probab=97.76  E-value=0.00038  Score=53.90  Aligned_cols=94  Identities=16%  Similarity=0.207  Sum_probs=61.0

Q ss_pred             EEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCee-EecCCCccHHHHHHhHCCCCccEEEeCCCch
Q 028523           21 YVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEA-FNYKEEPDLDAALKRYFPEGINIYFENVGGK   99 (208)
Q Consensus        21 ~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~v-~~~~~~~~~~~~~~~~~~~~~d~v~d~~g~~   99 (208)
                      +|+|+||+|-+|...++.+...|.+|++.+|+.++...+. ..+...+ .|..+...+.+.+    . ++|.||++.+..
T Consensus         2 kIlVtGatG~iG~~lv~~Ll~~g~~V~~l~R~~~~~~~l~-~~~v~~v~~Dl~d~~~l~~al----~-g~d~Vi~~~~~~   75 (317)
T CHL00194          2 SLLVIGATGTLGRQIVRQALDEGYQVRCLVRNLRKASFLK-EWGAELVYGDLSLPETLPPSF----K-GVTAIIDASTSR   75 (317)
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCeEEEEEcChHHhhhHh-hcCCEEEECCCCCHHHHHHHH----C-CCCEEEECCCCC
Confidence            6999999999999999988888999999999877655554 4454322 2333321222222    2 589999986521


Q ss_pred             -----h--------HHHHHHhhccCC--EEEEEecc
Q 028523          100 -----M--------LDAVLLNMRIQG--RITLCGMI  120 (208)
Q Consensus       100 -----~--------~~~~~~~l~~~G--~~v~~g~~  120 (208)
                           .        ....++.++..|  +++.++..
T Consensus        76 ~~~~~~~~~~~~~~~~~l~~aa~~~gvkr~I~~Ss~  111 (317)
T CHL00194         76 PSDLYNAKQIDWDGKLALIEAAKAAKIKRFIFFSIL  111 (317)
T ss_pred             CCCccchhhhhHHHHHHHHHHHHHcCCCEEEEeccc
Confidence                 0        123344444433  78887764

>PRK06701 short chain dehydrogenase; Provisional

Probab=97.76  E-value=0.00056  Score=52.27  Aligned_cols=105  Identities=15%  Similarity=0.170  Sum_probs=64.3

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHH-HHHHHHH---hcCCCe---eEecCCCccHHHHHHhHCC--CC
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKD-KVDLLKN---KFGFDE---AFNYKEEPDLDAALKRYFP--EG   88 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~-~~~~~~~---~~g~~~---v~~~~~~~~~~~~~~~~~~--~~   88 (208)
                      ++.++||+||+|++|...++.+...|++|+++.++.+ ..+.+.+   ..|...   ..|..+...+.+.+.+...  ++
T Consensus        45 ~~k~iLItGasggIG~~la~~l~~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~i~~~~~~  124 (290)
T PRK06701         45 KGKVALITGGDSGIGRAVAVLFAKEGADIAIVYLDEHEDANETKQRVEKEGVKCLLIPGDVSDEAFCKDAVEETVRELGR  124 (290)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            4678999999999999999888888999999887643 2222221   223321   2344333123333333221  26


Q ss_pred             ccEEEeCCCch----h-----------------------HHHHHHhhccCCEEEEEecccc
Q 028523           89 INIYFENVGGK----M-----------------------LDAVLLNMRIQGRITLCGMISQ  122 (208)
Q Consensus        89 ~d~v~d~~g~~----~-----------------------~~~~~~~l~~~G~~v~~g~~~~  122 (208)
                      +|++|.+.|..    .                       ...+++.++++|+++.++....
T Consensus       125 iD~lI~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~~g~iV~isS~~~  185 (290)
T PRK06701        125 LDILVNNAAFQYPQQSLEDITAEQLDKTFKTNIYSYFHMTKAALPHLKQGSAIINTGSITG  185 (290)
T ss_pred             CCEEEECCcccCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHhhCCeEEEEecccc
Confidence            89999887631    0                       1233445666789999887543

>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases

Probab=97.76  E-value=7.9e-05  Score=51.84  Aligned_cols=78  Identities=17%  Similarity=0.267  Sum_probs=49.8

Q ss_pred             CEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCC--HHHHHHHHHh---cCCC-ee--EecCCCccHHHHHHhHC--CCC
Q 028523           20 EYVFVSAASGAVGQLVGQFAKLVGC-YVVGSAGS--KDKVDLLKNK---FGFD-EA--FNYKEEPDLDAALKRYF--PEG   88 (208)
Q Consensus        20 ~~vli~ga~g~vG~~a~qla~~~g~-~v~~~~~s--~~~~~~~~~~---~g~~-~v--~~~~~~~~~~~~~~~~~--~~~   88 (208)
                      ++++|+||++++|...++.....|. +|+.+.++  .++.+.+.++   .+.. .+  .|..+..+....+.+..  .+.
T Consensus         1 k~~lItGa~~giG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~l~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   80 (167)
T PF00106_consen    1 KTVLITGASSGIGRALARALARRGARVVILTSRSEDSEGAQELIQELKAPGAKITFIECDLSDPESIRALIEEVIKRFGP   80 (167)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHHHHHHHHTTSEEEEEESETTSHHHHHHHHHHHHHHHSS
T ss_pred             CEEEEECCCCHHHHHHHHHHHhcCceEEEEeeeccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            4789999999999998887777777 78888888  4444444223   3431 12  33333323344444433  226


Q ss_pred             ccEEEeCCC
Q 028523           89 INIYFENVG   97 (208)
Q Consensus        89 ~d~v~d~~g   97 (208)
                      +|++|.+.|
T Consensus        81 ld~li~~ag   89 (167)
T PF00106_consen   81 LDILINNAG   89 (167)
T ss_dssp             ESEEEEECS
T ss_pred             ccccccccc
Confidence            999999887

As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....

>PRK07856 short chain dehydrogenase; Provisional

Probab=97.74  E-value=0.00017  Score=53.77  Aligned_cols=75  Identities=16%  Similarity=0.238  Sum_probs=51.2

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCC---eeEecCCCccHHHHHHhHCC--CCccEE
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFD---EAFNYKEEPDLDAALKRYFP--EGINIY   92 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~---~v~~~~~~~~~~~~~~~~~~--~~~d~v   92 (208)
                      .+.+++|+||+|++|...++.+...|++|+++++++++    . ..+..   ...|..+..++.+.+.....  +++|++
T Consensus         5 ~~k~~lItGas~gIG~~la~~l~~~g~~v~~~~r~~~~----~-~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~v   79 (252)
T PRK07856          5 TGRVVLVTGGTRGIGAGIARAFLAAGATVVVCGRRAPE----T-VDGRPAEFHAADVRDPDQVAALVDAIVERHGRLDVL   79 (252)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCChhh----h-hcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            57899999999999999999888899999999987654    1 22221   12344443233333333221  368999


Q ss_pred             EeCCC
Q 028523           93 FENVG   97 (208)
Q Consensus        93 ~d~~g   97 (208)
                      |.+.|
T Consensus        80 i~~ag   84 (252)
T PRK07856         80 VNNAG   84 (252)
T ss_pred             EECCC
Confidence            99887

>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=97.74  E-value=0.00027  Score=52.83  Aligned_cols=79  Identities=11%  Similarity=0.193  Sum_probs=52.0

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCH-HHHHHHHHhcCCCe-eEecCCCccHHHHHHhHCC--CCccEEE
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSK-DKVDLLKNKFGFDE-AFNYKEEPDLDAALKRYFP--EGINIYF   93 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~-~~~~~~~~~~g~~~-v~~~~~~~~~~~~~~~~~~--~~~d~v~   93 (208)
                      .+.+++|+||+|++|...++.+...|++|+++.++. +..+.++ ..+... ..|..+.....+.+.....  +++|++|
T Consensus         6 ~~k~~lItGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~l~-~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~li   84 (255)
T PRK06463          6 KGKVALITGGTRGIGRAIAEAFLREGAKVAVLYNSAENEAKELR-EKGVFTIKCDVGNRDQVKKSKEVVEKEFGRVDVLV   84 (255)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHH-hCCCeEEEecCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence            468899999999999999998888899998876543 3344444 333322 3454443233333333322  3699999


Q ss_pred             eCCC
Q 028523           94 ENVG   97 (208)
Q Consensus        94 d~~g   97 (208)
                      .+.|
T Consensus        85 ~~ag   88 (255)
T PRK06463         85 NNAG   88 (255)
T ss_pred             ECCC
Confidence            9886

>PRK07097 gluconate 5-dehydrogenase; Provisional

Probab=97.74  E-value=0.00029  Score=52.98  Aligned_cols=80  Identities=19%  Similarity=0.282  Sum_probs=53.7

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhc---CCCe---eEecCCCccHHHHHHhHCC--CCc
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKF---GFDE---AFNYKEEPDLDAALKRYFP--EGI   89 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~---g~~~---v~~~~~~~~~~~~~~~~~~--~~~   89 (208)
                      ++.+++|+|+++++|...+..+...|++|+++.+++++.+.+.+.+   |...   ..|..+.......+.+...  +++
T Consensus         9 ~~k~~lItGa~~~iG~~ia~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   88 (265)
T PRK07097          9 KGKIALITGASYGIGFAIAKAYAKAGATIVFNDINQELVDKGLAAYRELGIEAHGYVCDVTDEDGVQAMVSQIEKEVGVI   88 (265)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhCCCC
Confidence            5678999999999999988888888999999998887665443232   3321   2344433123333333221  368


Q ss_pred             cEEEeCCC
Q 028523           90 NIYFENVG   97 (208)
Q Consensus        90 d~v~d~~g   97 (208)
                      |.++.+.|
T Consensus        89 d~li~~ag   96 (265)
T PRK07097         89 DILVNNAG   96 (265)
T ss_pred             CEEEECCC
Confidence            99999887

>PLN02730 enoyl-[acyl-carrier-protein] reductase

Probab=97.74  E-value=0.00049  Score=52.87  Aligned_cols=38  Identities=11%  Similarity=0.209  Sum_probs=32.3

Q ss_pred             CCCEEEEecC--CchHHHHHHHHHHHcCCEEEEEeCCHHHH
Q 028523           18 QGEYVFVSAA--SGAVGQLVGQFAKLVGCYVVGSAGSKDKV   56 (208)
Q Consensus        18 ~g~~vli~ga--~g~vG~~a~qla~~~g~~v~~~~~s~~~~   56 (208)
                      .|+++||+||  ++|+|.+.++.+...|++|++ ++..+++
T Consensus         8 ~gk~alITGa~~s~GIG~a~A~~la~~Ga~Vv~-~~~~~~l   47 (303)
T PLN02730          8 RGKRAFIAGVADDNGYGWAIAKALAAAGAEILV-GTWVPAL   47 (303)
T ss_pred             CCCEEEEeCCCCCCcHHHHHHHHHHHCCCEEEE-EeCcchh
Confidence            5889999999  799999999999999999988 5454443

>PRK07889 enoyl-(acyl carrier protein) reductase; Provisional

Probab=97.73  E-value=0.0002  Score=53.68  Aligned_cols=80  Identities=15%  Similarity=0.245  Sum_probs=52.7

Q ss_pred             CCCEEEEecC--CchHHHHHHHHHHHcCCEEEEEeCCH--HHHHHHHHhcCCC---eeEecCCCccHHHHHHhHCC--CC
Q 028523           18 QGEYVFVSAA--SGAVGQLVGQFAKLVGCYVVGSAGSK--DKVDLLKNKFGFD---EAFNYKEEPDLDAALKRYFP--EG   88 (208)
Q Consensus        18 ~g~~vli~ga--~g~vG~~a~qla~~~g~~v~~~~~s~--~~~~~~~~~~g~~---~v~~~~~~~~~~~~~~~~~~--~~   88 (208)
                      .+.+++|+|+  ++++|.+.++.+...|++|+.++++.  +..+.+.++++..   ...|..+.....+.+.+...  ++
T Consensus         6 ~~k~~lItGa~~s~GIG~a~a~~la~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~   85 (256)
T PRK07889          6 EGKRILVTGVITDSSIAFHVARVAQEQGAEVVLTGFGRALRLTERIAKRLPEPAPVLELDVTNEEHLASLADRVREHVDG   85 (256)
T ss_pred             cCCEEEEeCCCCcchHHHHHHHHHHHCCCEEEEecCccchhHHHHHHHhcCCCCcEEeCCCCCHHHHHHHHHHHHHHcCC
Confidence            4689999998  89999999988888999999988653  3344444345432   12344443233333333222  36


Q ss_pred             ccEEEeCCC
Q 028523           89 INIYFENVG   97 (208)
Q Consensus        89 ~d~v~d~~g   97 (208)
                      +|+++++.|
T Consensus        86 iD~li~nAG   94 (256)
T PRK07889         86 LDGVVHSIG   94 (256)
T ss_pred             CcEEEEccc
Confidence            999999886

>PRK12367 short chain dehydrogenase; Provisional

Probab=97.73  E-value=0.00047  Score=51.37  Aligned_cols=73  Identities=23%  Similarity=0.382  Sum_probs=48.8

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHH-HHHHHHHhcCCCe--eEecCCCccHHHHHHhHCCCCccEEEe
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKD-KVDLLKNKFGFDE--AFNYKEEPDLDAALKRYFPEGINIYFE   94 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~-~~~~~~~~~g~~~--v~~~~~~~~~~~~~~~~~~~~~d~v~d   94 (208)
                      .+.+++|+||+|++|...++.+...|++|+++++++. ..+... . +...  ..|..+.   . .+.+.. +++|++|+
T Consensus        13 ~~k~~lITGas~gIG~ala~~l~~~G~~Vi~~~r~~~~~~~~~~-~-~~~~~~~~D~~~~---~-~~~~~~-~~iDilVn   85 (245)
T PRK12367         13 QGKRIGITGASGALGKALTKAFRAKGAKVIGLTHSKINNSESND-E-SPNEWIKWECGKE---E-SLDKQL-ASLDVLIL   85 (245)
T ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEECCchhhhhhhc-c-CCCeEEEeeCCCH---H-HHHHhc-CCCCEEEE
Confidence            4689999999999999999988889999999998762 222111 1 1112  2344332   2 233322 25999999


Q ss_pred             CCC
Q 028523           95 NVG   97 (208)
Q Consensus        95 ~~g   97 (208)
                      +.|
T Consensus        86 nAG   88 (245)
T PRK12367         86 NHG   88 (245)
T ss_pred             CCc
Confidence            987

>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=97.73  E-value=0.00016  Score=54.09  Aligned_cols=79  Identities=16%  Similarity=0.230  Sum_probs=51.9

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH---hcCCC-e--eEecCCCccHHHHHHhHCC--CCc
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKN---KFGFD-E--AFNYKEEPDLDAALKRYFP--EGI   89 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~---~~g~~-~--v~~~~~~~~~~~~~~~~~~--~~~   89 (208)
                      .+.++||+||++++|...++.+...|++|++++++ ++.+.+.+   +.+.. .  ..|..+.......+.+...  +++
T Consensus        14 ~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~-~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~i   92 (258)
T PRK06935         14 DGKVAIVTGGNTGLGQGYAVALAKAGADIIITTHG-TNWDETRRLIEKEGRKVTFVQVDLTKPESAEKVVKEALEEFGKI   92 (258)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCC-cHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            57899999999999999999998899999999877 33333321   33332 1  2344443223333333221  368


Q ss_pred             cEEEeCCC
Q 028523           90 NIYFENVG   97 (208)
Q Consensus        90 d~v~d~~g   97 (208)
                      |+++.+.|
T Consensus        93 d~li~~ag  100 (258)
T PRK06935         93 DILVNNAG  100 (258)
T ss_pred             CEEEECCC
Confidence            99999877

>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=97.72  E-value=0.00046  Score=51.11  Aligned_cols=79  Identities=23%  Similarity=0.355  Sum_probs=50.9

Q ss_pred             CCEEEEecCCchHHHHHHHHHHHcCCEEEEE-eCCHHHHHHHHHhc---CCC-e--eEecCCCccHHHHHHhHCC--CCc
Q 028523           19 GEYVFVSAASGAVGQLVGQFAKLVGCYVVGS-AGSKDKVDLLKNKF---GFD-E--AFNYKEEPDLDAALKRYFP--EGI   89 (208)
Q Consensus        19 g~~vli~ga~g~vG~~a~qla~~~g~~v~~~-~~s~~~~~~~~~~~---g~~-~--v~~~~~~~~~~~~~~~~~~--~~~   89 (208)
                      +.++||+||+|++|...+..+...|++|+++ .+++++.+.+.+.+   +.. .  ..|..+...+.+.+.....  +++
T Consensus         5 ~~~ilI~Gasg~iG~~la~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   84 (247)
T PRK05565          5 GKVAIVTGASGGIGRAIAELLAKEGAKVVIAYDINEEAAQELLEEIKEEGGDAIAVKADVSSEEDVENLVEQIVEKFGKI   84 (247)
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCCC
Confidence            5689999999999999988877789999998 87776654443222   221 1  2234333123333332221  269


Q ss_pred             cEEEeCCC
Q 028523           90 NIYFENVG   97 (208)
Q Consensus        90 d~v~d~~g   97 (208)
                      |.+|.+.|
T Consensus        85 d~vi~~ag   92 (247)
T PRK05565         85 DILVNNAG   92 (247)
T ss_pred             CEEEECCC
Confidence            99999876

>PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional

Probab=97.72  E-value=0.00028  Score=52.95  Aligned_cols=80  Identities=11%  Similarity=0.256  Sum_probs=51.3

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeC-CHHHHHHHHHh----cCCC-e--eEecCCCccHHHHHHhHCC--C
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAG-SKDKVDLLKNK----FGFD-E--AFNYKEEPDLDAALKRYFP--E   87 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~-s~~~~~~~~~~----~g~~-~--v~~~~~~~~~~~~~~~~~~--~   87 (208)
                      ++++++|+||++++|...++.+...|++|+.+.+ ++++.+.+.++    .+.. .  .+|..+.+++.+.+.+...  +
T Consensus         7 ~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   86 (260)
T PRK08416          7 KGKTLVISGGTRGIGKAIVYEFAQSGVNIAFTYNSNVEEANKIAEDLEQKYGIKAKAYPLNILEPETYKELFKKIDEDFD   86 (260)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhcC
Confidence            5789999999999999999988889999988764 34443332212    2332 1  2344443233333333322  3


Q ss_pred             CccEEEeCCC
Q 028523           88 GINIYFENVG   97 (208)
Q Consensus        88 ~~d~v~d~~g   97 (208)
                      ++|+++++.|
T Consensus        87 ~id~lv~nAg   96 (260)
T PRK08416         87 RVDFFISNAI   96 (260)
T ss_pred             CccEEEECcc
Confidence            6999999875

>PRK12746 short chain dehydrogenase; Provisional

Probab=97.72  E-value=0.00063  Score=50.70  Aligned_cols=80  Identities=18%  Similarity=0.207  Sum_probs=50.9

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEE-eCCHHHHHHHHHhc---CCC-e--eEecCCCccHHHHHHhHC-----
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGS-AGSKDKVDLLKNKF---GFD-E--AFNYKEEPDLDAALKRYF-----   85 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~-~~s~~~~~~~~~~~---g~~-~--v~~~~~~~~~~~~~~~~~-----   85 (208)
                      .+.+++|+||+|++|...++.+...|++|++. .++.++.+...+.+   +.. .  ..|..+..++...+.+..     
T Consensus         5 ~~~~ilItGasg~iG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~i~~~~~~~~~~~~~   84 (254)
T PRK12746          5 DGKVALVTGASRGIGRAIAMRLANDGALVAIHYGRNKQAADETIREIESNGGKAFLIEADLNSIDGVKKLVEQLKNELQI   84 (254)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCcCCHHHHHHHHHHHHHHhcc
Confidence            35789999999999999999888889988764 56665544333232   221 1  234444323333333321     


Q ss_pred             --C-CCccEEEeCCC
Q 028523           86 --P-EGINIYFENVG   97 (208)
Q Consensus        86 --~-~~~d~v~d~~g   97 (208)
                        + +++|++|.+.|
T Consensus        85 ~~~~~~id~vi~~ag   99 (254)
T PRK12746         85 RVGTSEIDILVNNAG   99 (254)
T ss_pred             ccCCCCccEEEECCC
Confidence              1 26899999887

>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated

Probab=97.71  E-value=0.0002  Score=53.51  Aligned_cols=80  Identities=19%  Similarity=0.272  Sum_probs=54.3

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHh---cCCC-e--eEecCCCccHHHHHHhHCC--CCc
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNK---FGFD-E--AFNYKEEPDLDAALKRYFP--EGI   89 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~---~g~~-~--v~~~~~~~~~~~~~~~~~~--~~~   89 (208)
                      .+.+++|+||++++|...++.+...|++++.++++.+..+.+.++   .+.. .  ..|..+.++..+.+.....  +++
T Consensus        10 ~~k~vlVtG~s~gIG~~la~~l~~~G~~vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~   89 (255)
T PRK06113         10 DGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFALSKLGKV   89 (255)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            478999999999999999998888899999999887765544322   2322 1  2444443233333333222  368


Q ss_pred             cEEEeCCC
Q 028523           90 NIYFENVG   97 (208)
Q Consensus        90 d~v~d~~g   97 (208)
                      |+++.+.|
T Consensus        90 d~li~~ag   97 (255)
T PRK06113         90 DILVNNAG   97 (255)
T ss_pred             CEEEECCC
Confidence            99999887

>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=97.71  E-value=0.001  Score=49.50  Aligned_cols=104  Identities=16%  Similarity=0.185  Sum_probs=64.0

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCC-HHHHH----HHHHhcCCC-e--eEecCCCccHHHHHHhHCC--C
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGS-KDKVD----LLKNKFGFD-E--AFNYKEEPDLDAALKRYFP--E   87 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s-~~~~~----~~~~~~g~~-~--v~~~~~~~~~~~~~~~~~~--~   87 (208)
                      .+.++||+||+|++|...++-+...|++++...++ .++..    .++ ..+.. .  ..|..+...+...+.+...  +
T Consensus         5 ~~~~vlitGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   83 (252)
T PRK06077          5 KDKVVVVTGSGRGIGRAIAVRLAKEGSLVVVNAKKRAEEMNETLKMVK-ENGGEGIGVLADVSTREGCETLAKATIDRYG   83 (252)
T ss_pred             CCcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHH-HcCCeeEEEEeccCCHHHHHHHHHHHHHHcC
Confidence            36789999999999999998888899998777643 22222    222 33332 1  2344443223333333221  3


Q ss_pred             CccEEEeCCCc-h-------------------------hHHHHHHhhccCCEEEEEecccc
Q 028523           88 GINIYFENVGG-K-------------------------MLDAVLLNMRIQGRITLCGMISQ  122 (208)
Q Consensus        88 ~~d~v~d~~g~-~-------------------------~~~~~~~~l~~~G~~v~~g~~~~  122 (208)
                      ++|.+|.+.|. .                         ..+.+.+.++..|+++.++....
T Consensus        84 ~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~sS~~~  144 (252)
T PRK06077         84 VADILVNNAGLGLFSPFLNVDDKLIDKHISTDFKSVIYCSQELAKEMREGGAIVNIASVAG  144 (252)
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHhHhCHHHHHHHHHHHHHhhcCcEEEEEcchhc
Confidence            68999998872 1                         02334556667789999887654

>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]

Probab=97.70  E-value=0.00055  Score=53.90  Aligned_cols=95  Identities=16%  Similarity=0.104  Sum_probs=67.6

Q ss_pred             CEEEEecCCchHHHHHHHHHHHcC-CEEEEEeCCHHHHHHHHHhcC---C-CeeEecCCCccHHHHHHhHCCCCccEEEe
Q 028523           20 EYVFVSAASGAVGQLVGQFAKLVG-CYVVGSAGSKDKVDLLKNKFG---F-DEAFNYKEEPDLDAALKRYFPEGINIYFE   94 (208)
Q Consensus        20 ~~vli~ga~g~vG~~a~qla~~~g-~~v~~~~~s~~~~~~~~~~~g---~-~~v~~~~~~~~~~~~~~~~~~~~~d~v~d   94 (208)
                      .+|||.|+ |+||+.+++.+.+.+ .+|++.+|+.++++.+. ...   . ...+|-.+.+...+.++     ++|+||+
T Consensus         2 ~~ilviGa-G~Vg~~va~~la~~~d~~V~iAdRs~~~~~~i~-~~~~~~v~~~~vD~~d~~al~~li~-----~~d~VIn   74 (389)
T COG1748           2 MKILVIGA-GGVGSVVAHKLAQNGDGEVTIADRSKEKCARIA-ELIGGKVEALQVDAADVDALVALIK-----DFDLVIN   74 (389)
T ss_pred             CcEEEECC-chhHHHHHHHHHhCCCceEEEEeCCHHHHHHHH-hhccccceeEEecccChHHHHHHHh-----cCCEEEE
Confidence            46899996 999999999988888 69999999999999887 443   2 13555554323333343     2699999


Q ss_pred             CCCchhHHHHH-HhhccCCEEEEEeccc
Q 028523           95 NVGGKMLDAVL-LNMRIQGRITLCGMIS  121 (208)
Q Consensus        95 ~~g~~~~~~~~-~~l~~~G~~v~~g~~~  121 (208)
                      +.+...-...+ .|++.|=.++.+....
T Consensus        75 ~~p~~~~~~i~ka~i~~gv~yvDts~~~  102 (389)
T COG1748          75 AAPPFVDLTILKACIKTGVDYVDTSYYE  102 (389)
T ss_pred             eCCchhhHHHHHHHHHhCCCEEEcccCC
Confidence            99965444444 5666666777776544

>PRK12938 acetyacetyl-CoA reductase; Provisional

Probab=97.70  E-value=0.00042  Score=51.40  Aligned_cols=81  Identities=22%  Similarity=0.312  Sum_probs=49.7

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeC-CHHHH-HHHHH--hcCCCe---eEecCCCccHHHHHHhHCC--CC
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAG-SKDKV-DLLKN--KFGFDE---AFNYKEEPDLDAALKRYFP--EG   88 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~-s~~~~-~~~~~--~~g~~~---v~~~~~~~~~~~~~~~~~~--~~   88 (208)
                      ++..++|+|++|++|...++.+...|++|++..+ ++.+. +.+.+  ..+...   ..|..+..++.+.+.+...  ++
T Consensus         2 ~~k~~lVtG~s~giG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   81 (246)
T PRK12938          2 SQRIAYVTGGMGGIGTSICQRLHKDGFKVVAGCGPNSPRRVKWLEDQKALGFDFIASEGNVGDWDSTKAAFDKVKAEVGE   81 (246)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhCC
Confidence            3678999999999999999999889999887553 23322 22220  234332   1344433223333333221  36


Q ss_pred             ccEEEeCCCc
Q 028523           89 INIYFENVGG   98 (208)
Q Consensus        89 ~d~v~d~~g~   98 (208)
                      +|+++++.|.
T Consensus        82 id~li~~ag~   91 (246)
T PRK12938         82 IDVLVNNAGI   91 (246)
T ss_pred             CCEEEECCCC
Confidence            9999999873

>PRK08690 enoyl-(acyl carrier protein) reductase; Provisional

Probab=97.69  E-value=0.00025  Score=53.29  Aligned_cols=80  Identities=6%  Similarity=0.173  Sum_probs=51.4

Q ss_pred             CCCEEEEecC--CchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH---HhcCCCe--eEecCCCccHHHHHHhHCC--CC
Q 028523           18 QGEYVFVSAA--SGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLK---NKFGFDE--AFNYKEEPDLDAALKRYFP--EG   88 (208)
Q Consensus        18 ~g~~vli~ga--~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~---~~~g~~~--v~~~~~~~~~~~~~~~~~~--~~   88 (208)
                      ++..++|+||  ++++|.+.++.+...|++|+.+.++++..+.++   +++|...  ..|..+.++....+.+...  ++
T Consensus         5 ~~k~~lITGa~~~~GIG~a~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   84 (261)
T PRK08690          5 QGKKILITGMISERSIAYGIAKACREQGAELAFTYVVDKLEERVRKMAAELDSELVFRCDVASDDEINQVFADLGKHWDG   84 (261)
T ss_pred             CCcEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCcHHHHHHHHHHHhccCCceEEECCCCCHHHHHHHHHHHHHHhCC
Confidence            5789999996  679999999988889999998876543333332   1334322  2344443234444433322  36


Q ss_pred             ccEEEeCCC
Q 028523           89 INIYFENVG   97 (208)
Q Consensus        89 ~d~v~d~~g   97 (208)
                      +|+++++.|
T Consensus        85 iD~lVnnAG   93 (261)
T PRK08690         85 LDGLVHSIG   93 (261)
T ss_pred             CcEEEECCc
Confidence            999999886

>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase

Probab=97.69  E-value=0.00023  Score=52.84  Aligned_cols=80  Identities=14%  Similarity=0.199  Sum_probs=53.7

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHh---cCCC-ee--EecCCCccHHHHHHhHCC--CCc
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNK---FGFD-EA--FNYKEEPDLDAALKRYFP--EGI   89 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~---~g~~-~v--~~~~~~~~~~~~~~~~~~--~~~   89 (208)
                      ++.++||+||+|++|...++.+...|++|+.++++.++.+.+.+.   .+.. .+  .|..+...+.+.+.....  +++
T Consensus         2 ~~~~ilItGas~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~   81 (250)
T TIGR03206         2 KDKTAIVTGGGGGIGGATCRRFAEEGAKVAVFDLNREAAEKVAADIRAKGGNAQAFACDITDRDSVDTAVAAAEQALGPV   81 (250)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            468899999999999999998888999999999888776554422   2221 22  333332123333333221  268


Q ss_pred             cEEEeCCC
Q 028523           90 NIYFENVG   97 (208)
Q Consensus        90 d~v~d~~g   97 (208)
                      |++|.+.|
T Consensus        82 d~vi~~ag   89 (250)
T TIGR03206        82 DVLVNNAG   89 (250)
T ss_pred             CEEEECCC
Confidence            99999887

Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.

>PRK08226 short chain dehydrogenase; Provisional

Probab=97.68  E-value=0.00031  Score=52.69  Aligned_cols=80  Identities=19%  Similarity=0.239  Sum_probs=51.8

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH--hcCCCe---eEecCCCccHHHHHHhHC--CCCcc
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKN--KFGFDE---AFNYKEEPDLDAALKRYF--PEGIN   90 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~--~~g~~~---v~~~~~~~~~~~~~~~~~--~~~~d   90 (208)
                      ++.+++|+||+|++|...++.+...|++|+.++++++..+.+.+  ..+...   ..|..+..++...+.+..  .+++|
T Consensus         5 ~~~~~lItG~s~giG~~la~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id   84 (263)
T PRK08226          5 TGKTALITGALQGIGEGIARVFARHGANLILLDISPEIEKLADELCGRGHRCTAVVADVRDPASVAAAIKRAKEKEGRID   84 (263)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHHcCCCC
Confidence            46889999999999999999888889999999988753333321  223221   234443312333333222  13689


Q ss_pred             EEEeCCC
Q 028523           91 IYFENVG   97 (208)
Q Consensus        91 ~v~d~~g   97 (208)
                      ++|.+.|
T Consensus        85 ~vi~~ag   91 (263)
T PRK08226         85 ILVNNAG   91 (263)
T ss_pred             EEEECCC
Confidence            9999887

>PRK12743 oxidoreductase; Provisional

Probab=97.68  E-value=0.00032  Score=52.47  Aligned_cols=79  Identities=16%  Similarity=0.271  Sum_probs=50.2

Q ss_pred             CCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCC-HHHHHHHHH---hcCCC-e--eEecCCCccHHHHHHhHCC--CCc
Q 028523           19 GEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGS-KDKVDLLKN---KFGFD-E--AFNYKEEPDLDAALKRYFP--EGI   89 (208)
Q Consensus        19 g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s-~~~~~~~~~---~~g~~-~--v~~~~~~~~~~~~~~~~~~--~~~   89 (208)
                      +++++|+||++++|..+++.+...|++|+.+.++ .++.+.+.+   ..|.. .  ..|..+...+...+.+...  +++
T Consensus         2 ~k~vlItGas~giG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   81 (256)
T PRK12743          2 AQVAIVTASDSGIGKACALLLAQQGFDIGITWHSDEEGAKETAEEVRSHGVRAEIRQLDLSDLPEGAQALDKLIQRLGRI   81 (256)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            4689999999999999999998899999887643 333333221   33432 2  2344443223333333222  268


Q ss_pred             cEEEeCCC
Q 028523           90 NIYFENVG   97 (208)
Q Consensus        90 d~v~d~~g   97 (208)
                      |++|.+.|
T Consensus        82 d~li~~ag   89 (256)
T PRK12743         82 DVLVNNAG   89 (256)
T ss_pred             CEEEECCC
Confidence            99999887

>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional

Probab=97.68  E-value=0.00023  Score=53.27  Aligned_cols=79  Identities=13%  Similarity=0.110  Sum_probs=52.1

Q ss_pred             CCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHh----cCCC--e--eEecCCCccHHHHHHhHCC--CC
Q 028523           19 GEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNK----FGFD--E--AFNYKEEPDLDAALKRYFP--EG   88 (208)
Q Consensus        19 g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~----~g~~--~--v~~~~~~~~~~~~~~~~~~--~~   88 (208)
                      ++++||+||+|++|...++.+...|++|+.++++..+.+.+.++    .+..  .  ..|..+.......+.+...  ++
T Consensus         2 ~k~ilItG~~~~IG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~   81 (259)
T PRK12384          2 NQVAVVIGGGQTLGAFLCHGLAEEGYRVAVADINSEKAANVAQEINAEYGEGMAYGFGADATSEQSVLALSRGVDEIFGR   81 (259)
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhcCCceeEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            46899999999999999998888899999999887765444322    2311  1  2243333123333333221  36


Q ss_pred             ccEEEeCCC
Q 028523           89 INIYFENVG   97 (208)
Q Consensus        89 ~d~v~d~~g   97 (208)
                      +|.++++.|
T Consensus        82 id~vv~~ag   90 (259)
T PRK12384         82 VDLLVYNAG   90 (259)
T ss_pred             CCEEEECCC
Confidence            899999887

>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional

Probab=97.68  E-value=0.00036  Score=52.52  Aligned_cols=80  Identities=14%  Similarity=0.254  Sum_probs=51.4

Q ss_pred             CCCEEEEecCCc--hHHHHHHHHHHHcCCEEEEEeCCHH---HHHHHHHhcCCCe--eEecCCCccHHHHHHhHCC--CC
Q 028523           18 QGEYVFVSAASG--AVGQLVGQFAKLVGCYVVGSAGSKD---KVDLLKNKFGFDE--AFNYKEEPDLDAALKRYFP--EG   88 (208)
Q Consensus        18 ~g~~vli~ga~g--~vG~~a~qla~~~g~~v~~~~~s~~---~~~~~~~~~g~~~--v~~~~~~~~~~~~~~~~~~--~~   88 (208)
                      +|.+++|+||++  ++|.+.++.+...|++|+.+.++++   ..+.+..+.+...  ..|..+.+++.+.+.+...  ++
T Consensus         5 ~~k~~lITGas~~~GIG~aia~~la~~G~~vil~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~   84 (262)
T PRK07984          5 SGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQLGSDIVLPCDVAEDASIDAMFAELGKVWPK   84 (262)
T ss_pred             CCCEEEEeCCCCCccHHHHHHHHHHHCCCEEEEEecchhHHHHHHHHHhccCCceEeecCCCCHHHHHHHHHHHHhhcCC
Confidence            578999999975  8999999888889999998887632   2222321223222  2344443234444443322  36


Q ss_pred             ccEEEeCCC
Q 028523           89 INIYFENVG   97 (208)
Q Consensus        89 ~d~v~d~~g   97 (208)
                      +|++|++.|
T Consensus        85 iD~linnAg   93 (262)
T PRK07984         85 FDGFVHSIG   93 (262)
T ss_pred             CCEEEECCc
Confidence            999999987

>PRK13943 protein-L-isoaspartate O-methyltransferase; Provisional

Probab=97.67  E-value=0.0012  Score=50.98  Aligned_cols=100  Identities=18%  Similarity=0.255  Sum_probs=68.7

Q ss_pred             HhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC--EEEEEeCCHHHHHHHHH---hcCCCeeEecCCCccHHHHHHhHCC
Q 028523           12 EVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGC--YVVGSAGSKDKVDLLKN---KFGFDEAFNYKEEPDLDAALKRYFP   86 (208)
Q Consensus        12 ~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g~--~v~~~~~s~~~~~~~~~---~~g~~~v~~~~~~~~~~~~~~~~~~   86 (208)
                      +...++++++||..|+ | .|..++.+++..+.  .|++++.+++-.+.+++   ..|.+.+.... . +..+....  .
T Consensus        74 ~~L~i~~g~~VLDIG~-G-tG~~a~~LA~~~~~~g~VvgVDis~~~l~~Ar~~l~~~g~~nV~~i~-g-D~~~~~~~--~  147 (322)
T PRK13943         74 EWVGLDKGMRVLEIGG-G-TGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVRRLGIENVIFVC-G-DGYYGVPE--F  147 (322)
T ss_pred             HhcCCCCCCEEEEEeC-C-ccHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEe-C-Chhhcccc--c
Confidence            4456889999999994 4 69999999998764  69999999886665553   45654432222 2 32222211  1


Q ss_pred             CCccEEEeCCCc-hhHHHHHHhhccCCEEEEE
Q 028523           87 EGINIYFENVGG-KMLDAVLLNMRIQGRITLC  117 (208)
Q Consensus        87 ~~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~  117 (208)
                      +.+|+|+.+.+. ......++.|+++|+++..
T Consensus       148 ~~fD~Ii~~~g~~~ip~~~~~~LkpgG~Lvv~  179 (322)
T PRK13943        148 APYDVIFVTVGVDEVPETWFTQLKEGGRVIVP  179 (322)
T ss_pred             CCccEEEECCchHHhHHHHHHhcCCCCEEEEE
Confidence            269999998884 4555778899999998764

>PRK08303 short chain dehydrogenase; Provisional

Probab=97.66  E-value=0.00037  Score=53.66  Aligned_cols=80  Identities=15%  Similarity=0.200  Sum_probs=51.8

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCH----------HHHHHHHH---hcCCCe---eEecCCCccHHHHH
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSK----------DKVDLLKN---KFGFDE---AFNYKEEPDLDAAL   81 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~----------~~~~~~~~---~~g~~~---v~~~~~~~~~~~~~   81 (208)
                      .|.+++|+||++++|.+.++.+...|++|++++++.          ++.+.+.+   ..|...   ..|..+..+....+
T Consensus         7 ~~k~~lITGgs~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~   86 (305)
T PRK08303          7 RGKVALVAGATRGAGRGIAVELGAAGATVYVTGRSTRARRSEYDRPETIEETAELVTAAGGRGIAVQVDHLVPEQVRALV   86 (305)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecccccccccccccchHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHH
Confidence            578999999999999999999988999999998863          23332221   333221   23444432333333


Q ss_pred             HhHCC--CCccEEEeCC-C
Q 028523           82 KRYFP--EGINIYFENV-G   97 (208)
Q Consensus        82 ~~~~~--~~~d~v~d~~-g   97 (208)
                      .+...  +++|+++++. |
T Consensus        87 ~~~~~~~g~iDilVnnA~g  105 (305)
T PRK08303         87 ERIDREQGRLDILVNDIWG  105 (305)
T ss_pred             HHHHHHcCCccEEEECCcc
Confidence            33322  3699999987 5

>PF00670 AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase, NAD binding domain; InterPro: IPR015878 S-adenosyl-L-homocysteine hydrolase (3

Probab=97.66  E-value=0.0013  Score=45.27  Aligned_cols=100  Identities=19%  Similarity=0.238  Sum_probs=62.2

Q ss_pred             HHHHHHHhcC-CCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHHHHhH
Q 028523            6 AYAGFFEVCS-PKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRY   84 (208)
Q Consensus         6 A~~~l~~~~~-~~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~   84 (208)
                      .+.++.+..+ .-.|.+++|.| =|-+|.-.++.++.+|++|+++...+-+.-.+. .-|.. +.      .+.+.+.  
T Consensus         9 ~~d~i~r~t~~~l~Gk~vvV~G-YG~vG~g~A~~lr~~Ga~V~V~e~DPi~alqA~-~dGf~-v~------~~~~a~~--   77 (162)
T PF00670_consen    9 LVDGIMRATNLMLAGKRVVVIG-YGKVGKGIARALRGLGARVTVTEIDPIRALQAA-MDGFE-VM------TLEEALR--   77 (162)
T ss_dssp             HHHHHHHHH-S--TTSEEEEE---SHHHHHHHHHHHHTT-EEEEE-SSHHHHHHHH-HTT-E-EE-------HHHHTT--
T ss_pred             HHHHHHhcCceeeCCCEEEEeC-CCcccHHHHHHHhhCCCEEEEEECChHHHHHhh-hcCcE-ec------CHHHHHh--
Confidence            3445544433 45899999999 599999999999999999999998887765554 34542 21      2333322  


Q ss_pred             CCCCccEEEeCCCchh--HHHHHHhhccCCEEEEEec
Q 028523           85 FPEGINIYFENVGGKM--LDAVLLNMRIQGRITLCGM  119 (208)
Q Consensus        85 ~~~~~d~v~d~~g~~~--~~~~~~~l~~~G~~v~~g~  119 (208)
                         ..|++|.++|...  -.+-++.|+++-.+...|.
T Consensus        78 ---~adi~vtaTG~~~vi~~e~~~~mkdgail~n~Gh  111 (162)
T PF00670_consen   78 ---DADIFVTATGNKDVITGEHFRQMKDGAILANAGH  111 (162)
T ss_dssp             ---T-SEEEE-SSSSSSB-HHHHHHS-TTEEEEESSS
T ss_pred             ---hCCEEEECCCCccccCHHHHHHhcCCeEEeccCc
Confidence               3799999999643  3577788887766666554

3.1.1 from EC) (AdoHcyase) is an enzyme of the activated methyl cycle, responsible for the reversible hydration of S-adenosyl-L-homocysteine into adenosine and homocysteine. AdoHcyase is an ubiquitous enzyme which binds and requires NAD+ as a cofactor. AdoHcyase is a highly conserved protein [] of about 430 to 470 amino acids. This entry represents the glycine-rich region in the central part of AdoHcyase, which is thought to be involved in NAD-binding.; GO: 0004013 adenosylhomocysteinase activity; PDB: 2ZJ1_C 3DHY_B 2ZIZ_C 2ZJ0_D 3CE6_B 3GLQ_B 3D64_A 3G1U_C 1A7A_A 3NJ4_C ....

>PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional

Probab=97.65  E-value=0.00034  Score=51.96  Aligned_cols=82  Identities=11%  Similarity=0.140  Sum_probs=53.6

Q ss_pred             CCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHh---cCCC--ee--EecCC--CccHHHHHHhHCC
Q 028523           16 PKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNK---FGFD--EA--FNYKE--EPDLDAALKRYFP   86 (208)
Q Consensus        16 ~~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~---~g~~--~v--~~~~~--~~~~~~~~~~~~~   86 (208)
                      ..++.+++|+|++|++|...++.+...|++|++++++.++.+.+.++   .+..  .+  .|...  ..++.+.+.....
T Consensus         9 ~~~~k~vlItG~~g~iG~~la~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~   88 (247)
T PRK08945          9 LLKDRIILVTGAGDGIGREAALTYARHGATVILLGRTEEKLEAVYDEIEAAGGPQPAIIPLDLLTATPQNYQQLADTIEE   88 (247)
T ss_pred             ccCCCEEEEeCCCchHHHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHhcCCCCceEEEecccCCCHHHHHHHHHHHHH
Confidence            45788999999999999999988888899999999988765444322   2322  12  23321  1123332222222


Q ss_pred             --CCccEEEeCCC
Q 028523           87 --EGINIYFENVG   97 (208)
Q Consensus        87 --~~~d~v~d~~g   97 (208)
                        +++|.+|.+.+
T Consensus        89 ~~~~id~vi~~Ag  101 (247)
T PRK08945         89 QFGRLDGVLHNAG  101 (247)
T ss_pred             HhCCCCEEEECCc
Confidence              26899998876

>PRK06997 enoyl-(acyl carrier protein) reductase; Provisional

Probab=97.65  E-value=0.00028  Score=52.99  Aligned_cols=80  Identities=15%  Similarity=0.287  Sum_probs=52.0

Q ss_pred             CCCEEEEecC--CchHHHHHHHHHHHcCCEEEEEeCC---HHHHHHHHHhcCCCe--eEecCCCccHHHHHHhHCC--CC
Q 028523           18 QGEYVFVSAA--SGAVGQLVGQFAKLVGCYVVGSAGS---KDKVDLLKNKFGFDE--AFNYKEEPDLDAALKRYFP--EG   88 (208)
Q Consensus        18 ~g~~vli~ga--~g~vG~~a~qla~~~g~~v~~~~~s---~~~~~~~~~~~g~~~--v~~~~~~~~~~~~~~~~~~--~~   88 (208)
                      ++.+++|+||  ++++|.+.++.+...|++|+.+.+.   +++.+.+.++++...  ..|..+.++....+.....  ++
T Consensus         5 ~~k~vlItGas~~~GIG~a~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~   84 (260)
T PRK06997          5 AGKRILITGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKDRITEFAAEFGSDLVFPCDVASDEQIDALFASLGQHWDG   84 (260)
T ss_pred             CCcEEEEeCCCCCCcHHHHHHHHHHHCCCeEEEEccchHHHHHHHHHHHhcCCcceeeccCCCHHHHHHHHHHHHHHhCC
Confidence            5789999996  5799999998888899999987543   333333332455322  2444444244444444322  37


Q ss_pred             ccEEEeCCC
Q 028523           89 INIYFENVG   97 (208)
Q Consensus        89 ~d~v~d~~g   97 (208)
                      +|+++++.|
T Consensus        85 iD~lvnnAG   93 (260)
T PRK06997         85 LDGLVHSIG   93 (260)
T ss_pred             CcEEEEccc
Confidence            999999876

>PRK13940 glutamyl-tRNA reductase; Provisional

Probab=97.64  E-value=0.00067  Score=54.32  Aligned_cols=74  Identities=16%  Similarity=0.209  Sum_probs=54.1

Q ss_pred             CCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHHHHhHCCCCccEEEeC
Q 028523           17 KQGEYVFVSAASGAVGQLVGQFAKLVGC-YVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFEN   95 (208)
Q Consensus        17 ~~g~~vli~ga~g~vG~~a~qla~~~g~-~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~d~v~d~   95 (208)
                      -.+.+++|.|+ |++|.+++..+...|+ +++++.|+.++.+.+.++++...++.+.   +..+.+.     .+|+||.|
T Consensus       179 l~~kkvlviGa-G~~a~~va~~L~~~g~~~I~V~nRt~~ra~~La~~~~~~~~~~~~---~l~~~l~-----~aDiVI~a  249 (414)
T PRK13940        179 ISSKNVLIIGA-GQTGELLFRHVTALAPKQIMLANRTIEKAQKITSAFRNASAHYLS---ELPQLIK-----KADIIIAA  249 (414)
T ss_pred             ccCCEEEEEcC-cHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHhcCCeEecHH---HHHHHhc-----cCCEEEEC
Confidence            46789999995 9999999999988997 8999999988877776577622333221   2222222     38999999


Q ss_pred             CCch
Q 028523           96 VGGK   99 (208)
Q Consensus        96 ~g~~   99 (208)
                      ++++
T Consensus       250 T~a~  253 (414)
T PRK13940        250 VNVL  253 (414)
T ss_pred             cCCC
Confidence            9965

>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed

Probab=97.64  E-value=0.00038  Score=51.67  Aligned_cols=80  Identities=19%  Similarity=0.242  Sum_probs=51.9

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH---hcCCC-ee--EecCCCccHHHHHHhHCC--CCc
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKN---KFGFD-EA--FNYKEEPDLDAALKRYFP--EGI   89 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~---~~g~~-~v--~~~~~~~~~~~~~~~~~~--~~~   89 (208)
                      .+.+++|+||+|++|...++.+...|++|++++++.++...+.+   ..+.. .+  .|..+...+...+.+...  +.+
T Consensus         5 ~~~~ilItGasg~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~   84 (251)
T PRK12826          5 EGRVALVTGAARGIGRAIAVRLAADGAEVIVVDICGDDAAATAELVEAAGGKARARQVDVRDRAALKAAVAAGVEDFGRL   84 (251)
T ss_pred             CCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCCC
Confidence            46789999999999999998888889999999998665443321   22221 12  233333123333332221  268


Q ss_pred             cEEEeCCC
Q 028523           90 NIYFENVG   97 (208)
Q Consensus        90 d~v~d~~g   97 (208)
                      |.+|.+.+
T Consensus        85 d~vi~~ag   92 (251)
T PRK12826         85 DILVANAG   92 (251)
T ss_pred             CEEEECCC
Confidence            99999876

>KOG0725 consensus Reductases with broad range of substrate specificities [General function prediction only]

Probab=97.64  E-value=0.00028  Score=53.27  Aligned_cols=81  Identities=20%  Similarity=0.348  Sum_probs=56.3

Q ss_pred             CCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhc---CCC------eeEecCCCccHHH---HHHhH
Q 028523           17 KQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKF---GFD------EAFNYKEEPDLDA---ALKRY   84 (208)
Q Consensus        17 ~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~---g~~------~v~~~~~~~~~~~---~~~~~   84 (208)
                      -.|..++|+|+++++|.+.+..+...|++|+.+.+++++.+....++   +..      .+.|..+.++..+   ...+.
T Consensus         6 l~gkvalVTG~s~GIG~aia~~la~~Ga~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~l~~~~~~~   85 (270)
T KOG0725|consen    6 LAGKVALVTGGSSGIGKAIALLLAKAGAKVVITGRSEERLEETAQELGGLGYTGGKVLAIVCDVSKEVDVEKLVEFAVEK   85 (270)
T ss_pred             CCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCeeEEEECcCCCHHHHHHHHHHHHHH
Confidence            46789999999999999999999999999999999998866554332   221      1334443312222   22222


Q ss_pred             CCCCccEEEeCCC
Q 028523           85 FPEGINIYFENVG   97 (208)
Q Consensus        85 ~~~~~d~v~d~~g   97 (208)
                      ..+++|+.++..|
T Consensus        86 ~~GkidiLvnnag   98 (270)
T KOG0725|consen   86 FFGKIDILVNNAG   98 (270)
T ss_pred             hCCCCCEEEEcCC
Confidence            2447999999877

>TIGR01035 hemA glutamyl-tRNA reductase

Probab=97.64  E-value=0.00074  Score=54.29  Aligned_cols=75  Identities=20%  Similarity=0.375  Sum_probs=54.9

Q ss_pred             CCCCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHHHHhHCCCCccEEE
Q 028523           15 SPKQGEYVFVSAASGAVGQLVGQFAKLVGC-YVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYF   93 (208)
Q Consensus        15 ~~~~g~~vli~ga~g~vG~~a~qla~~~g~-~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~d~v~   93 (208)
                      ...++++++|+|+ |.+|..+++.++..|+ +|+++.++.++.+.+.+++|.. .++..   +..+.+.     ++|+||
T Consensus       176 ~~l~~~~VlViGa-G~iG~~~a~~L~~~G~~~V~v~~rs~~ra~~la~~~g~~-~i~~~---~l~~~l~-----~aDvVi  245 (417)
T TIGR01035       176 GSLKGKKALLIGA-GEMGELVAKHLLRKGVGKILIANRTYERAEDLAKELGGE-AVKFE---DLEEYLA-----EADIVI  245 (417)
T ss_pred             CCccCCEEEEECC-hHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHcCCe-EeeHH---HHHHHHh-----hCCEEE
Confidence            3467899999996 9999999999999995 8999999988766444377753 33221   2223222     489999


Q ss_pred             eCCCch
Q 028523           94 ENVGGK   99 (208)
Q Consensus        94 d~~g~~   99 (208)
                      +|++.+
T Consensus       246 ~aT~s~  251 (417)
T TIGR01035       246 SSTGAP  251 (417)
T ss_pred             ECCCCC
Confidence            999853

This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA.

>PRK13942 protein-L-isoaspartate O-methyltransferase; Provisional

Probab=97.63  E-value=0.0018  Score=47.14  Aligned_cols=102  Identities=15%  Similarity=0.156  Sum_probs=67.3

Q ss_pred             HHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcC--CEEEEEeCCHHHHHHHHHh---cCCCeeEecCCCccHHHHHHhH
Q 028523           10 FFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVG--CYVVGSAGSKDKVDLLKNK---FGFDEAFNYKEEPDLDAALKRY   84 (208)
Q Consensus        10 l~~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g--~~v~~~~~s~~~~~~~~~~---~g~~~v~~~~~~~~~~~~~~~~   84 (208)
                      +.....++++++||-.|  .|.|..+..+++..+  .+|+.++.+++-.+.+++.   .|...+ ..... +.....  .
T Consensus        68 ~~~~l~~~~g~~VLdIG--~GsG~~t~~la~~~~~~~~V~~vE~~~~~~~~a~~~l~~~g~~~v-~~~~g-d~~~~~--~  141 (212)
T PRK13942         68 MCELLDLKEGMKVLEIG--TGSGYHAAVVAEIVGKSGKVVTIERIPELAEKAKKTLKKLGYDNV-EVIVG-DGTLGY--E  141 (212)
T ss_pred             HHHHcCCCCcCEEEEEC--CcccHHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCe-EEEEC-CcccCC--C
Confidence            33556789999999998  466888888888775  5999999998877766643   343221 11111 111100  0


Q ss_pred             CCCCccEEEeCCC-chhHHHHHHhhccCCEEEEE
Q 028523           85 FPEGINIYFENVG-GKMLDAVLLNMRIQGRITLC  117 (208)
Q Consensus        85 ~~~~~d~v~d~~g-~~~~~~~~~~l~~~G~~v~~  117 (208)
                      ..++||.|+-... .......++.|++||+++..
T Consensus       142 ~~~~fD~I~~~~~~~~~~~~l~~~LkpgG~lvi~  175 (212)
T PRK13942        142 ENAPYDRIYVTAAGPDIPKPLIEQLKDGGIMVIP  175 (212)
T ss_pred             cCCCcCEEEECCCcccchHHHHHhhCCCcEEEEE
Confidence            1237999976554 45567788899999998775

>PRK06940 short chain dehydrogenase; Provisional

Probab=97.63  E-value=0.0017  Score=49.19  Aligned_cols=101  Identities=17%  Similarity=0.168  Sum_probs=63.6

Q ss_pred             CCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhc---CCC-e--eEecCCCccHHHHHHhHC-CCCccE
Q 028523           19 GEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKF---GFD-E--AFNYKEEPDLDAALKRYF-PEGINI   91 (208)
Q Consensus        19 g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~---g~~-~--v~~~~~~~~~~~~~~~~~-~~~~d~   91 (208)
                      ++.++|+|+ |++|..+++.+. .|++|+.+++++++.+.+.+++   |.. .  ..|..+.+.+...+.... -+++|+
T Consensus         2 ~k~~lItGa-~gIG~~la~~l~-~G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~i~~~~~~~~~~g~id~   79 (275)
T PRK06940          2 KEVVVVIGA-GGIGQAIARRVG-AGKKVLLADYNEENLEAAAKTLREAGFDVSTQEVDVSSRESVKALAATAQTLGPVTG   79 (275)
T ss_pred             CCEEEEECC-ChHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHHHhcCCCCE
Confidence            357889997 799999888775 7999999999877665443233   322 1  245554423444343331 137999


Q ss_pred             EEeCCCc-h---h---------------HHHHHHhhccCCEEEEEeccc
Q 028523           92 YFENVGG-K---M---------------LDAVLLNMRIQGRITLCGMIS  121 (208)
Q Consensus        92 v~d~~g~-~---~---------------~~~~~~~l~~~G~~v~~g~~~  121 (208)
                      +|++.|. .   .               ++.+++.|.++|+++.+++..
T Consensus        80 li~nAG~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~iv~isS~~  128 (275)
T PRK06940         80 LVHTAGVSPSQASPEAILKVDLYGTALVLEEFGKVIAPGGAGVVIASQS  128 (275)
T ss_pred             EEECCCcCCchhhHHHHHHHhhHHHHHHHHHHHHHHhhCCCEEEEEecc
Confidence            9999872 1   1               234455666677777776544

>PRK07775 short chain dehydrogenase; Provisional

Probab=97.61  E-value=0.00061  Score=51.56  Aligned_cols=80  Identities=16%  Similarity=0.162  Sum_probs=52.3

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH---hcCCCe-e--EecCCCccHHHHHHhHC--CCCc
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKN---KFGFDE-A--FNYKEEPDLDAALKRYF--PEGI   89 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~---~~g~~~-v--~~~~~~~~~~~~~~~~~--~~~~   89 (208)
                      +..+++|+||+|++|...++.+...|++|++++++.++.+.+.+   ..+... .  .|..+...+.+.+.+..  -+++
T Consensus         9 ~~~~vlVtGa~g~iG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   88 (274)
T PRK07775          9 DRRPALVAGASSGIGAATAIELAAAGFPVALGARRVEKCEELVDKIRADGGEAVAFPLDVTDPDSVKSFVAQAEEALGEI   88 (274)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHhcCCC
Confidence            34689999999999999998888889999999988766544332   223321 1  24443322333333321  1368


Q ss_pred             cEEEeCCC
Q 028523           90 NIYFENVG   97 (208)
Q Consensus        90 d~v~d~~g   97 (208)
                      |++|.+.|
T Consensus        89 d~vi~~Ag   96 (274)
T PRK07775         89 EVLVSGAG   96 (274)
T ss_pred             CEEEECCC
Confidence            99999887

>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated

Probab=97.61  E-value=0.00079  Score=53.77  Aligned_cols=75  Identities=31%  Similarity=0.386  Sum_probs=50.3

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCC-e--eEecCCCccHHHHHHhHCCCCccEEEe
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFD-E--AFNYKEEPDLDAALKRYFPEGINIYFE   94 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~-~--v~~~~~~~~~~~~~~~~~~~~~d~v~d   94 (208)
                      +|++++|+||+|++|.+.++.+...|++|+++++++++.+...+..+.. .  ..|..+.    +.+.+.. +++|++|+
T Consensus       177 ~gK~VLITGASgGIG~aLA~~La~~G~~Vi~l~r~~~~l~~~~~~~~~~v~~v~~Dvsd~----~~v~~~l-~~IDiLIn  251 (406)
T PRK07424        177 KGKTVAVTGASGTLGQALLKELHQQGAKVVALTSNSDKITLEINGEDLPVKTLHWQVGQE----AALAELL-EKVDILII  251 (406)
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhhcCCCeEEEEeeCCCH----HHHHHHh-CCCCEEEE
Confidence            5789999999999999999888888999999998876554322121111 1  2343332    2233322 25999999


Q ss_pred             CCC
Q 028523           95 NVG   97 (208)
Q Consensus        95 ~~g   97 (208)
                      +.|
T Consensus       252 nAG  254 (406)
T PRK07424        252 NHG  254 (406)
T ss_pred             CCC
Confidence            876

>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated

Probab=97.61  E-value=0.0012  Score=49.10  Aligned_cols=75  Identities=16%  Similarity=0.280  Sum_probs=49.7

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCC-e--eEecCCCccHHHHHHhHCC--CCccEE
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFD-E--AFNYKEEPDLDAALKRYFP--EGINIY   92 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~-~--v~~~~~~~~~~~~~~~~~~--~~~d~v   92 (208)
                      ++.++||+|++|++|...++.+...|++|++++++.     .. ..+.. .  ..|..+...+.+.+.+...  +++|++
T Consensus         7 ~~k~vlItGas~~iG~~la~~l~~~G~~v~~~~~~~-----~~-~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~v   80 (252)
T PRK08220          7 SGKTVWVTGAAQGIGYAVALAFVEAGAKVIGFDQAF-----LT-QEDYPFATFVLDVSDAAAVAQVCQRLLAETGPLDVL   80 (252)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecch-----hh-hcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            467899999999999999998888899999999775     22 22221 1  2333333123333333221  368999


Q ss_pred             EeCCCc
Q 028523           93 FENVGG   98 (208)
Q Consensus        93 ~d~~g~   98 (208)
                      |.+.|.
T Consensus        81 i~~ag~   86 (252)
T PRK08220         81 VNAAGI   86 (252)
T ss_pred             EECCCc
Confidence            998873

>PRK08278 short chain dehydrogenase; Provisional

Probab=97.60  E-value=0.00047  Score=52.15  Aligned_cols=79  Identities=22%  Similarity=0.331  Sum_probs=51.2

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHH-------HH----HHHHhcCCCe---eEecCCCccHHHHHHh
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDK-------VD----LLKNKFGFDE---AFNYKEEPDLDAALKR   83 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~-------~~----~~~~~~g~~~---v~~~~~~~~~~~~~~~   83 (208)
                      ++.+++|+||+|++|...++.+...|++|++++++.+.       .+    .++ ..+...   ..|..+...+...+.+
T Consensus         5 ~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~-~~~~~~~~~~~D~~~~~~i~~~~~~   83 (273)
T PRK08278          5 SGKTLFITGASRGIGLAIALRAARDGANIVIAAKTAEPHPKLPGTIHTAAEEIE-AAGGQALPLVGDVRDEDQVAAAVAK   83 (273)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecccccccchhhHHHHHHHHHH-hcCCceEEEEecCCCHHHHHHHHHH
Confidence            46789999999999999999888889999999987542       11    122 233321   2444443223333332


Q ss_pred             HCC--CCccEEEeCCC
Q 028523           84 YFP--EGINIYFENVG   97 (208)
Q Consensus        84 ~~~--~~~d~v~d~~g   97 (208)
                      ...  +++|++|++.|
T Consensus        84 ~~~~~g~id~li~~ag   99 (273)
T PRK08278         84 AVERFGGIDICVNNAS   99 (273)
T ss_pred             HHHHhCCCCEEEECCC
Confidence            211  26999999887

>COG2242 CobL Precorrin-6B methylase 2 [Coenzyme metabolism]

Probab=97.60  E-value=0.0018  Score=45.50  Aligned_cols=100  Identities=21%  Similarity=0.346  Sum_probs=67.6

Q ss_pred             cCCCCCCEEEEecCCchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHH---hcCCCeeEecCCCccHHHHHHhHCCCCc
Q 028523           14 CSPKQGEYVFVSAASGAVGQLVGQFAKLV-GCYVVGSAGSKDKVDLLKN---KFGFDEAFNYKEEPDLDAALKRYFPEGI   89 (208)
Q Consensus        14 ~~~~~g~~vli~ga~g~vG~~a~qla~~~-g~~v~~~~~s~~~~~~~~~---~~g~~~v~~~~~~~~~~~~~~~~~~~~~   89 (208)
                      ..+++|+.++=.|+  +.|..++++++.. ..+||++.++++..+..++   +||.+.+.-. +. +..+.+.+..  .+
T Consensus        30 L~~~~g~~l~DIGa--GtGsi~iE~a~~~p~~~v~AIe~~~~a~~~~~~N~~~fg~~n~~vv-~g-~Ap~~L~~~~--~~  103 (187)
T COG2242          30 LRPRPGDRLWDIGA--GTGSITIEWALAGPSGRVIAIERDEEALELIERNAARFGVDNLEVV-EG-DAPEALPDLP--SP  103 (187)
T ss_pred             hCCCCCCEEEEeCC--CccHHHHHHHHhCCCceEEEEecCHHHHHHHHHHHHHhCCCcEEEE-ec-cchHhhcCCC--CC
Confidence            46889998887785  4477778888544 3499999998887665543   6887642211 11 2233333221  59


Q ss_pred             cEEEeCCCc---hhHHHHHHhhccCCEEEEEec
Q 028523           90 NIYFENVGG---KMLDAVLLNMRIQGRITLCGM  119 (208)
Q Consensus        90 d~v~d~~g~---~~~~~~~~~l~~~G~~v~~g~  119 (208)
                      |.+|---|.   ..++.+|..|+++|++|.-..
T Consensus       104 daiFIGGg~~i~~ile~~~~~l~~ggrlV~nai  136 (187)
T COG2242         104 DAIFIGGGGNIEEILEAAWERLKPGGRLVANAI  136 (187)
T ss_pred             CEEEECCCCCHHHHHHHHHHHcCcCCeEEEEee
Confidence            999965552   368999999999999987544

>PRK05650 short chain dehydrogenase; Provisional

Probab=97.60  E-value=0.00039  Score=52.42  Aligned_cols=77  Identities=16%  Similarity=0.145  Sum_probs=50.7

Q ss_pred             EEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHh---cCCCe-e--EecCCCccHHHHHHhHC--CCCccEE
Q 028523           21 YVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNK---FGFDE-A--FNYKEEPDLDAALKRYF--PEGINIY   92 (208)
Q Consensus        21 ~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~---~g~~~-v--~~~~~~~~~~~~~~~~~--~~~~d~v   92 (208)
                      +++|+||+|++|...++.+...|++|+.++++.++.+.+.++   .+... +  .|..+..++.+.+....  .+++|++
T Consensus         2 ~vlVtGasggIG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~id~l   81 (270)
T PRK05650          2 RVMITGAASGLGRAIALRWAREGWRLALADVNEEGGEETLKLLREAGGDGFYQRCDVRDYSQLTALAQACEEKWGGIDVI   81 (270)
T ss_pred             EEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            689999999999999988888899999999888775544322   23221 2  23333212233222221  1369999


Q ss_pred             EeCCC
Q 028523           93 FENVG   97 (208)
Q Consensus        93 ~d~~g   97 (208)
                      |.+.|
T Consensus        82 I~~ag   86 (270)
T PRK05650         82 VNNAG   86 (270)
T ss_pred             EECCC
Confidence            99987

>COG2226 UbiE Methylase involved in ubiquinone/menaquinone biosynthesis [Coenzyme metabolism]

Probab=97.60  E-value=0.0011  Score=48.87  Aligned_cols=103  Identities=20%  Similarity=0.246  Sum_probs=71.8

Q ss_pred             hcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHhcCC---CeeEecCCCccHHHHHHhHCCCC
Q 028523           13 VCSPKQGEYVFVSAASGAVGQLVGQFAKLVGC-YVVGSAGSKDKVDLLKNKFGF---DEAFNYKEEPDLDAALKRYFPEG   88 (208)
Q Consensus        13 ~~~~~~g~~vli~ga~g~vG~~a~qla~~~g~-~v~~~~~s~~~~~~~~~~~g~---~~v~~~~~~~~~~~~~~~~~~~~   88 (208)
                      ....++|++||=.+  +|+|-.+..+++..|- +|++++.|+.-++.++++..-   .. +.+-.. +. +.+ .+-+..
T Consensus        46 ~~~~~~g~~vLDva--~GTGd~a~~~~k~~g~g~v~~~D~s~~ML~~a~~k~~~~~~~~-i~fv~~-dA-e~L-Pf~D~s  119 (238)
T COG2226          46 LLGIKPGDKVLDVA--CGTGDMALLLAKSVGTGEVVGLDISESMLEVAREKLKKKGVQN-VEFVVG-DA-ENL-PFPDNS  119 (238)
T ss_pred             hhCCCCCCEEEEec--CCccHHHHHHHHhcCCceEEEEECCHHHHHHHHHHhhccCccc-eEEEEe-ch-hhC-CCCCCc
Confidence            34556899998776  5789999999998875 999999999988877754432   11 211111 11 111 123337


Q ss_pred             ccEEEeCCCc-------hhHHHHHHhhccCCEEEEEeccc
Q 028523           89 INIYFENVGG-------KMLDAVLLNMRIQGRITLCGMIS  121 (208)
Q Consensus        89 ~d~v~d~~g~-------~~~~~~~~~l~~~G~~v~~g~~~  121 (208)
                      ||++..+.|-       ..+.++.+.|+|||+++.+....
T Consensus       120 FD~vt~~fglrnv~d~~~aL~E~~RVlKpgG~~~vle~~~  159 (238)
T COG2226         120 FDAVTISFGLRNVTDIDKALKEMYRVLKPGGRLLVLEFSK  159 (238)
T ss_pred             cCEEEeeehhhcCCCHHHHHHHHHHhhcCCeEEEEEEcCC
Confidence            9999776652       26899999999999999987754

>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase

Probab=97.59  E-value=0.00033  Score=52.17  Aligned_cols=79  Identities=16%  Similarity=0.215  Sum_probs=52.7

Q ss_pred             CCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhc---CCC-e--eEecCCCccHHHHHHhHC--CCCcc
Q 028523           19 GEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKF---GFD-E--AFNYKEEPDLDAALKRYF--PEGIN   90 (208)
Q Consensus        19 g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~---g~~-~--v~~~~~~~~~~~~~~~~~--~~~~d   90 (208)
                      +.++||+|++|++|...++.+...|++|+++++++++.+.+.+.+   +.. .  ..|..+..++...+....  .+++|
T Consensus         1 ~~~vlItGa~g~lG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d   80 (255)
T TIGR01963         1 GKTALVTGAASGIGLAIALALAAAGANVVVNDLGEAGAEAAAKVATDAGGSVIYLVADVTKEDEIADMIAAAAAEFGGLD   80 (255)
T ss_pred             CCEEEEcCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHhcCCCC
Confidence            357999999999999999888888999999999887766654322   221 1  234444322333333322  12589


Q ss_pred             EEEeCCC
Q 028523           91 IYFENVG   97 (208)
Q Consensus        91 ~v~d~~g   97 (208)
                      .+|.+.+
T Consensus        81 ~vi~~a~   87 (255)
T TIGR01963        81 ILVNNAG   87 (255)
T ss_pred             EEEECCC
Confidence            9998775

This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.

>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated

Probab=97.59  E-value=0.00048  Score=51.43  Aligned_cols=79  Identities=20%  Similarity=0.312  Sum_probs=50.5

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHH--HHHHHHHhcCCC-e--eEecCCCccHHHHHHhHCC--CCcc
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKD--KVDLLKNKFGFD-E--AFNYKEEPDLDAALKRYFP--EGIN   90 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~--~~~~~~~~~g~~-~--v~~~~~~~~~~~~~~~~~~--~~~d   90 (208)
                      .|.+++|+|+++++|.+.++.+...|++|+.++++..  ..+.+. +.+.. .  ..|..+..+....+.+...  +++|
T Consensus         9 ~~k~~lItG~~~gIG~a~a~~l~~~G~~vv~~~~~~~~~~~~~~~-~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~D   87 (253)
T PRK08993          9 EGKVAVVTGCDTGLGQGMALGLAEAGCDIVGINIVEPTETIEQVT-ALGRRFLSLTADLRKIDGIPALLERAVAEFGHID   87 (253)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEecCcchHHHHHHHH-hcCCeEEEEECCCCCHHHHHHHHHHHHHHhCCCC
Confidence            4789999999999999999999889999998775432  223333 34432 1  2233332123333333222  3699


Q ss_pred             EEEeCCC
Q 028523           91 IYFENVG   97 (208)
Q Consensus        91 ~v~d~~g   97 (208)
                      +++++.|
T Consensus        88 ~li~~Ag   94 (253)
T PRK08993         88 ILVNNAG   94 (253)
T ss_pred             EEEECCC
Confidence            9999887

>PRK07577 short chain dehydrogenase; Provisional

Probab=97.59  E-value=0.00032  Score=51.63  Aligned_cols=74  Identities=23%  Similarity=0.213  Sum_probs=50.6

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCC-CeeEecCCCccHHHHHHhHCCC-CccEEEeC
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGF-DEAFNYKEEPDLDAALKRYFPE-GINIYFEN   95 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~-~~v~~~~~~~~~~~~~~~~~~~-~~d~v~d~   95 (208)
                      .+.+++|+||+|++|...++.+...|++|+.+.++.++ .     +.. ....|..+...+...+.+.... ++|.+|.+
T Consensus         2 ~~k~vlItG~s~~iG~~ia~~l~~~G~~v~~~~r~~~~-~-----~~~~~~~~D~~~~~~~~~~~~~~~~~~~~d~vi~~   75 (234)
T PRK07577          2 SSRTVLVTGATKGIGLALSLRLANLGHQVIGIARSAID-D-----FPGELFACDLADIEQTAATLAQINEIHPVDAIVNN   75 (234)
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCccc-c-----cCceEEEeeCCCHHHHHHHHHHHHHhCCCcEEEEC
Confidence            35789999999999999999888899999999987654 1     111 1234444432333334433332 68999998


Q ss_pred             CC
Q 028523           96 VG   97 (208)
Q Consensus        96 ~g   97 (208)
                      .|
T Consensus        76 ag   77 (234)
T PRK07577         76 VG   77 (234)
T ss_pred             CC
Confidence            87

>PF01135 PCMT: Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT); InterPro: IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (2

Probab=97.57  E-value=0.00053  Score=49.66  Aligned_cols=103  Identities=17%  Similarity=0.209  Sum_probs=65.9

Q ss_pred             HHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC--EEEEEeCCHHHHHHHHH---hcCCCee-EecCCCccHHHHHHh
Q 028523           10 FFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGC--YVVGSAGSKDKVDLLKN---KFGFDEA-FNYKEEPDLDAALKR   83 (208)
Q Consensus        10 l~~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g~--~v~~~~~s~~~~~~~~~---~~g~~~v-~~~~~~~~~~~~~~~   83 (208)
                      +.+...+++|++||-.|  +|.|..++-+++..|.  +|+.+.+.++-.+.+++   .+|.+.+ +...+.   .....+
T Consensus        64 ~l~~L~l~pg~~VLeIG--tGsGY~aAlla~lvg~~g~Vv~vE~~~~l~~~A~~~l~~~~~~nv~~~~gdg---~~g~~~  138 (209)
T PF01135_consen   64 MLEALDLKPGDRVLEIG--TGSGYQAALLAHLVGPVGRVVSVERDPELAERARRNLARLGIDNVEVVVGDG---SEGWPE  138 (209)
T ss_dssp             HHHHTTC-TT-EEEEES---TTSHHHHHHHHHHSTTEEEEEEESBHHHHHHHHHHHHHHTTHSEEEEES-G---GGTTGG
T ss_pred             HHHHHhcCCCCEEEEec--CCCcHHHHHHHHhcCccceEEEECccHHHHHHHHHHHHHhccCceeEEEcch---hhcccc
Confidence            44567799999999998  5678999999998875  68888888775555443   4455432 222221   111111


Q ss_pred             HCCCCccEEEeCCCc-hhHHHHHHhhccCCEEEEEec
Q 028523           84 YFPEGINIYFENVGG-KMLDAVLLNMRIQGRITLCGM  119 (208)
Q Consensus        84 ~~~~~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~  119 (208)
                        .++||.|+-+.+- ..-...++.|++||+++..-.
T Consensus       139 --~apfD~I~v~~a~~~ip~~l~~qL~~gGrLV~pi~  173 (209)
T PF01135_consen  139 --EAPFDRIIVTAAVPEIPEALLEQLKPGGRLVAPIG  173 (209)
T ss_dssp             --G-SEEEEEESSBBSS--HHHHHTEEEEEEEEEEES
T ss_pred             --CCCcCEEEEeeccchHHHHHHHhcCCCcEEEEEEc
Confidence              1279999988884 444678889999999988533

1.1.77 from EC) (PCMT) [] (which is also known as L-isoaspartyl protein carboxyl methyltransferase) is an enzyme that catalyses the transfer of a methyl group from S-adenosylmethionine to the free carboxyl groups of D-aspartyl or L-isoaspartyl residues in a variety of peptides and proteins. The enzyme does not act on normal L-aspartyl residues L-isoaspartyl and D-aspartyl are the products of the spontaneous deamidation and/or isomerisation of normal L-aspartyl and L-asparaginyl residues in proteins. PCMT plays a role in the repair and/or degradation of these damaged proteins; the enzymatic methyl esterification of the abnormal residues can lead to their conversion to normal L-aspartyl residues. The SAM domain is present in most of these proteins.; GO: 0004719 protein-L-isoaspartate (D-aspartate) O-methyltransferase activity, 0006464 protein modification process; PDB: 3LBF_A 1DL5_B 1JG3_B 1JG2_A 1JG1_A 1JG4_A 2YXE_A 2PBF_B 1VBF_C 1R18_A ....

>PRK05599 hypothetical protein; Provisional

Probab=97.57  E-value=0.00044  Score=51.47  Aligned_cols=76  Identities=13%  Similarity=0.165  Sum_probs=50.4

Q ss_pred             EEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhc---CCC--e--eEecCCCccHHHHHHhHCC--CCccE
Q 028523           21 YVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKF---GFD--E--AFNYKEEPDLDAALKRYFP--EGINI   91 (208)
Q Consensus        21 ~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~---g~~--~--v~~~~~~~~~~~~~~~~~~--~~~d~   91 (208)
                      +++|+||++++|.+.++... .|++|+.+.+++++.+.+.+++   |..  .  .+|..+.+...+.+.+...  +++|+
T Consensus         2 ~vlItGas~GIG~aia~~l~-~g~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id~   80 (246)
T PRK05599          2 SILILGGTSDIAGEIATLLC-HGEDVVLAARRPEAAQGLASDLRQRGATSVHVLSFDAQDLDTHRELVKQTQELAGEISL   80 (246)
T ss_pred             eEEEEeCccHHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhccCCceEEEEcccCCHHHHHHHHHHHHHhcCCCCE
Confidence            58999999999998887665 4999999999988776554333   322  1  2344444233333333222  36999


Q ss_pred             EEeCCC
Q 028523           92 YFENVG   97 (208)
Q Consensus        92 v~d~~g   97 (208)
                      ++.+.|
T Consensus        81 lv~nag   86 (246)
T PRK05599         81 AVVAFG   86 (246)
T ss_pred             EEEecC
Confidence            998877

>PLN02476 O-methyltransferase

Probab=97.57  E-value=0.0021  Score=48.49  Aligned_cols=103  Identities=15%  Similarity=0.142  Sum_probs=71.8

Q ss_pred             HHhcCCCCCCEEEEecCCchHHHHHHHHHHHcC--CEEEEEeCCHHHHHHHHH---hcCCCeeEecCCCccHHHHHHhHC
Q 028523           11 FEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVG--CYVVGSAGSKDKVDLLKN---KFGFDEAFNYKEEPDLDAALKRYF   85 (208)
Q Consensus        11 ~~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g--~~v~~~~~s~~~~~~~~~---~~g~~~v~~~~~~~~~~~~~~~~~   85 (208)
                      ..+.+..+.++||=.|  +++|..++.+++.++  .+|+.+..+++..+.+++   +.|...-+..... +..+.+.++.
T Consensus       111 ~~L~~~~~ak~VLEIG--T~tGySal~lA~al~~~G~V~TiE~d~e~~~~Ar~n~~~aGl~~~I~li~G-dA~e~L~~l~  187 (278)
T PLN02476        111 AMLVQILGAERCIEVG--VYTGYSSLAVALVLPESGCLVACERDSNSLEVAKRYYELAGVSHKVNVKHG-LAAESLKSMI  187 (278)
T ss_pred             HHHHHhcCCCeEEEec--CCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEc-CHHHHHHHHH
Confidence            3445667789999988  577888899998774  489999999988777764   3465433333333 4445554432


Q ss_pred             ----CCCccEEEeCCCc----hhHHHHHHhhccCCEEEE
Q 028523           86 ----PEGINIYFENVGG----KMLDAVLLNMRIQGRITL  116 (208)
Q Consensus        86 ----~~~~d~v~d~~g~----~~~~~~~~~l~~~G~~v~  116 (208)
                          .+.||.||--...    +.++.+++.|++||.++.
T Consensus       188 ~~~~~~~FD~VFIDa~K~~Y~~y~e~~l~lL~~GGvIV~  226 (278)
T PLN02476        188 QNGEGSSYDFAFVDADKRMYQDYFELLLQLVRVGGVIVM  226 (278)
T ss_pred             hcccCCCCCEEEECCCHHHHHHHHHHHHHhcCCCcEEEE
Confidence                2379999865552    257889999999999875

>PRK07370 enoyl-(acyl carrier protein) reductase; Validated

Probab=97.57  E-value=0.00041  Score=52.03  Aligned_cols=105  Identities=11%  Similarity=0.106  Sum_probs=65.6

Q ss_pred             CCCEEEEecCC--chHHHHHHHHHHHcCCEEEEEeCCH------HHHHHHHHhcCCCe--eEecCCCccHHHHHHhHCC-
Q 028523           18 QGEYVFVSAAS--GAVGQLVGQFAKLVGCYVVGSAGSK------DKVDLLKNKFGFDE--AFNYKEEPDLDAALKRYFP-   86 (208)
Q Consensus        18 ~g~~vli~ga~--g~vG~~a~qla~~~g~~v~~~~~s~------~~~~~~~~~~g~~~--v~~~~~~~~~~~~~~~~~~-   86 (208)
                      .|++++|+||+  +++|.+.++.+...|++|+++.++.      +..+.+.++.+...  ..|..+.+...+.+.+... 
T Consensus         5 ~~k~~lItGas~~~GIG~aia~~la~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~   84 (258)
T PRK07370          5 TGKKALVTGIANNRSIAWGIAQQLHAAGAELGITYLPDEKGRFEKKVRELTEPLNPSLFLPCDVQDDAQIEETFETIKQK   84 (258)
T ss_pred             CCcEEEEeCCCCCCchHHHHHHHHHHCCCEEEEEecCcccchHHHHHHHHHhccCcceEeecCcCCHHHHHHHHHHHHHH
Confidence            47899999985  7999999988888999998876432      22333331222111  2454444234433433322 


Q ss_pred             -CCccEEEeCCCc--------hh----------------------HHHHHHhhccCCEEEEEecccc
Q 028523           87 -EGINIYFENVGG--------KM----------------------LDAVLLNMRIQGRITLCGMISQ  122 (208)
Q Consensus        87 -~~~d~v~d~~g~--------~~----------------------~~~~~~~l~~~G~~v~~g~~~~  122 (208)
                       +++|+++++.|.        +.                      .+..++.|..+|+++.++...+
T Consensus        85 ~g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~~~~m~~~g~Iv~isS~~~  151 (258)
T PRK07370         85 WGKLDILVHCLAFAGKEELIGDFSATSREGFARALEISAYSLAPLCKAAKPLMSEGGSIVTLTYLGG  151 (258)
T ss_pred             cCCCCEEEEcccccCcccccCcchhhCHHHHHHHheeeeHHHHHHHHHHHHHHhhCCeEEEEecccc
Confidence             369999998872        10                      2345667777899998876543

>PLN00015 protochlorophyllide reductase

Probab=97.55  E-value=0.00049  Score=53.06  Aligned_cols=75  Identities=12%  Similarity=0.147  Sum_probs=51.6

Q ss_pred             EEecCCchHHHHHHHHHHHcC-CEEEEEeCCHHHHHHHHHhcCCC--e----eEecCCCccHHHHHHhHCC--CCccEEE
Q 028523           23 FVSAASGAVGQLVGQFAKLVG-CYVVGSAGSKDKVDLLKNKFGFD--E----AFNYKEEPDLDAALKRYFP--EGINIYF   93 (208)
Q Consensus        23 li~ga~g~vG~~a~qla~~~g-~~v~~~~~s~~~~~~~~~~~g~~--~----v~~~~~~~~~~~~~~~~~~--~~~d~v~   93 (208)
                      +|+||++++|...++.+...| ++|+.+++++++.+.+.++++..  .    .+|..+.+.+.+.+.+...  +++|++|
T Consensus         1 lITGas~GIG~aia~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~~~iD~lI   80 (308)
T PLN00015          1 IITGASSGLGLATAKALAETGKWHVVMACRDFLKAERAAKSAGMPKDSYTVMHLDLASLDSVRQFVDNFRRSGRPLDVLV   80 (308)
T ss_pred             CEeCCCChHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEEecCCCHHHHHHHHHHHHhcCCCCCEEE
Confidence            589999999999988888889 89999999888766555455321  1    2455544233333433322  3699999


Q ss_pred             eCCC
Q 028523           94 ENVG   97 (208)
Q Consensus        94 d~~g   97 (208)
                      ++.|
T Consensus        81 nnAG   84 (308)
T PLN00015         81 CNAA   84 (308)
T ss_pred             ECCC
Confidence            9887

>PRK05855 short chain dehydrogenase; Validated

Probab=97.55  E-value=0.00037  Score=58.24  Aligned_cols=80  Identities=18%  Similarity=0.162  Sum_probs=55.3

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHh---cCCC-e--eEecCCCccHHHHHHhHCC--CCc
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNK---FGFD-E--AFNYKEEPDLDAALKRYFP--EGI   89 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~---~g~~-~--v~~~~~~~~~~~~~~~~~~--~~~   89 (208)
                      .+.++||+||+|++|...++.+...|++|++++++.++.+.+.+.   .|.. .  ..|..+.....+.+.+...  +++
T Consensus       314 ~~~~~lv~G~s~giG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~i  393 (582)
T PRK05855        314 SGKLVVVTGAGSGIGRETALAFAREGAEVVASDIDEAAAERTAELIRAAGAVAHAYRVDVSDADAMEAFAEWVRAEHGVP  393 (582)
T ss_pred             CCCEEEEECCcCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHhcCCC
Confidence            467899999999999999988888999999999998776654422   2332 1  2455544233333333322  369


Q ss_pred             cEEEeCCC
Q 028523           90 NIYFENVG   97 (208)
Q Consensus        90 d~v~d~~g   97 (208)
                      |++|++.|
T Consensus       394 d~lv~~Ag  401 (582)
T PRK05855        394 DIVVNNAG  401 (582)
T ss_pred             cEEEECCc
Confidence            99999987

>PLN00141 Tic62-NAD(P)-related group II protein; Provisional

Probab=97.54  E-value=0.00091  Score=49.94  Aligned_cols=101  Identities=17%  Similarity=0.102  Sum_probs=62.6

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhc-CCCe-eEecCCCccHHHHHHhHCCCCccEEEeC
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKF-GFDE-AFNYKEEPDLDAALKRYFPEGINIYFEN   95 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~-g~~~-v~~~~~~~~~~~~~~~~~~~~~d~v~d~   95 (208)
                      .+.+|+|+||+|.+|..+++.+...|.+|++..+++++........ +... ..|..+.  . +.+.+....++|+||.+
T Consensus        16 ~~~~ilItGasG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~Dl~d~--~-~~l~~~~~~~~d~vi~~   92 (251)
T PLN00141         16 KTKTVFVAGATGRTGKRIVEQLLAKGFAVKAGVRDVDKAKTSLPQDPSLQIVRADVTEG--S-DKLVEAIGDDSDAVICA   92 (251)
T ss_pred             cCCeEEEECCCcHHHHHHHHHHHhCCCEEEEEecCHHHHHHhcccCCceEEEEeeCCCC--H-HHHHHHhhcCCCEEEEC
Confidence            4678999999999999999888888999999998887654432111 1211 2344331  1 22222222269999988


Q ss_pred             CCch--------------hHHHHHHhhcc--CCEEEEEeccc
Q 028523           96 VGGK--------------MLDAVLLNMRI--QGRITLCGMIS  121 (208)
Q Consensus        96 ~g~~--------------~~~~~~~~l~~--~G~~v~~g~~~  121 (208)
                      .|..              .....++.+..  .++++.++...
T Consensus        93 ~g~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~iV~iSS~~  134 (251)
T PLN00141         93 TGFRRSFDPFAPWKVDNFGTVNLVEACRKAGVTRFILVSSIL  134 (251)
T ss_pred             CCCCcCCCCCCceeeehHHHHHHHHHHHHcCCCEEEEEcccc
Confidence            7631              12334444443  36888877653

>PRK00258 aroE shikimate 5-dehydrogenase; Reviewed

Probab=97.54  E-value=0.0011  Score=50.39  Aligned_cols=93  Identities=14%  Similarity=0.130  Sum_probs=60.7

Q ss_pred             CCCCEEEEecCCchHHHHHHHHHHHcC-CEEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHHHHhHCCCCccEEEeC
Q 028523           17 KQGEYVFVSAASGAVGQLVGQFAKLVG-CYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFEN   95 (208)
Q Consensus        17 ~~g~~vli~ga~g~vG~~a~qla~~~g-~~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~d~v~d~   95 (208)
                      ..+.+++|+|+ |++|.+++..+...| .+|+++.|+.++.+.+.+.++....+.. +. +..+.+     ..+|+||+|
T Consensus       121 ~~~k~vlVlGa-Gg~a~ai~~aL~~~g~~~V~v~~R~~~~a~~l~~~~~~~~~~~~-~~-~~~~~~-----~~~DivIna  192 (278)
T PRK00258        121 LKGKRILILGA-GGAARAVILPLLDLGVAEITIVNRTVERAEELAKLFGALGKAEL-DL-ELQEEL-----ADFDLIINA  192 (278)
T ss_pred             CCCCEEEEEcC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhccceee-cc-cchhcc-----ccCCEEEEC
Confidence            45778999996 999999999999999 5999999999888777645543211111 00 111111     258999999


Q ss_pred             CCchhH------HHHHHhhccCCEEEEE
Q 028523           96 VGGKML------DAVLLNMRIQGRITLC  117 (208)
Q Consensus        96 ~g~~~~------~~~~~~l~~~G~~v~~  117 (208)
                      ++....      ......+.++..++.+
T Consensus       193 Tp~g~~~~~~~~~~~~~~l~~~~~v~Di  220 (278)
T PRK00258        193 TSAGMSGELPLPPLPLSLLRPGTIVYDM  220 (278)
T ss_pred             CcCCCCCCCCCCCCCHHHcCCCCEEEEe
Confidence            873321      1123566666666655

>PRK09135 pteridine reductase; Provisional

Probab=97.54  E-value=0.00057  Score=50.68  Aligned_cols=80  Identities=9%  Similarity=0.120  Sum_probs=50.3

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCH-HHHHHHHHh---cCCC--e--eEecCCCccHHHHHHhHC--CC
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSK-DKVDLLKNK---FGFD--E--AFNYKEEPDLDAALKRYF--PE   87 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~-~~~~~~~~~---~g~~--~--v~~~~~~~~~~~~~~~~~--~~   87 (208)
                      .+.++||+||+|++|..+++.+...|++|++++++. ++.+.+.+.   .+..  .  ..|..+.+.+...+....  -+
T Consensus         5 ~~~~vlItGa~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   84 (249)
T PRK09135          5 SAKVALITGGARRIGAAIARTLHAAGYRVAIHYHRSAAEADALAAELNALRPGSAAALQADLLDPDALPELVAACVAAFG   84 (249)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhhcCCceEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            457899999999999999888888899999999763 333332211   1111  1  234444322333333221  12


Q ss_pred             CccEEEeCCC
Q 028523           88 GINIYFENVG   97 (208)
Q Consensus        88 ~~d~v~d~~g   97 (208)
                      ++|++|.+.|
T Consensus        85 ~~d~vi~~ag   94 (249)
T PRK09135         85 RLDALVNNAS   94 (249)
T ss_pred             CCCEEEECCC
Confidence            6899999987

>PRK13944 protein-L-isoaspartate O-methyltransferase; Provisional

Probab=97.54  E-value=0.0016  Score=47.20  Aligned_cols=103  Identities=12%  Similarity=0.132  Sum_probs=65.9

Q ss_pred             HHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcC--CEEEEEeCCHHHHHHHHH---hcCCCeeEecCCCccHHHHHHhH
Q 028523           10 FFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVG--CYVVGSAGSKDKVDLLKN---KFGFDEAFNYKEEPDLDAALKRY   84 (208)
Q Consensus        10 l~~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g--~~v~~~~~s~~~~~~~~~---~~g~~~v~~~~~~~~~~~~~~~~   84 (208)
                      +.+...++++++||-.|+  |.|..+..+++..+  .+|+.++.+++-.+.+++   ..+....+..... +..+.+.  
T Consensus        64 ~~~~l~~~~~~~VLDiG~--GsG~~~~~la~~~~~~g~V~~iD~~~~~~~~a~~~l~~~~~~~~v~~~~~-d~~~~~~--  138 (205)
T PRK13944         64 MCELIEPRPGMKILEVGT--GSGYQAAVCAEAIERRGKVYTVEIVKELAIYAAQNIERLGYWGVVEVYHG-DGKRGLE--  138 (205)
T ss_pred             HHHhcCCCCCCEEEEECc--CccHHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEEC-CcccCCc--
Confidence            335567789999998884  66888888888764  599999999887666653   3343211111111 2111111  


Q ss_pred             CCCCccEEEeCCC-chhHHHHHHhhccCCEEEEE
Q 028523           85 FPEGINIYFENVG-GKMLDAVLLNMRIQGRITLC  117 (208)
Q Consensus        85 ~~~~~d~v~d~~g-~~~~~~~~~~l~~~G~~v~~  117 (208)
                      ..+.||.|+-+.. ...-...++.|++||+++..
T Consensus       139 ~~~~fD~Ii~~~~~~~~~~~l~~~L~~gG~lvi~  172 (205)
T PRK13944        139 KHAPFDAIIVTAAASTIPSALVRQLKDGGVLVIP  172 (205)
T ss_pred             cCCCccEEEEccCcchhhHHHHHhcCcCcEEEEE
Confidence            1236999987666 34456778899999998764

>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional

Probab=97.54  E-value=0.00046  Score=51.29  Aligned_cols=80  Identities=14%  Similarity=0.216  Sum_probs=50.7

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEE-eCCHHHHHHHHH---hcCCC-ee--EecCCCccHHHHHHhHCC--CC
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGS-AGSKDKVDLLKN---KFGFD-EA--FNYKEEPDLDAALKRYFP--EG   88 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~-~~s~~~~~~~~~---~~g~~-~v--~~~~~~~~~~~~~~~~~~--~~   88 (208)
                      ++.+++|+||+|++|...++.+...|++|++. .++.++.+.+.+   +.+.. ..  .|..+..++...+.+...  ++
T Consensus         3 ~~~~vlItGa~g~iG~~~a~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   82 (250)
T PRK08063          3 SGKVALVTGSSRGIGKAIALRLAEEGYDIAVNYARSRKAAEETAEEIEALGRKALAVKANVGDVEKIKEMFAQIDEEFGR   82 (250)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            46789999999999999999998899988764 556555433322   23332 12  343333233333333221  36


Q ss_pred             ccEEEeCCC
Q 028523           89 INIYFENVG   97 (208)
Q Consensus        89 ~d~v~d~~g   97 (208)
                      +|++|.+.|
T Consensus        83 id~vi~~ag   91 (250)
T PRK08063         83 LDVFVNNAA   91 (250)
T ss_pred             CCEEEECCC
Confidence            899999887

>PRK09134 short chain dehydrogenase; Provisional

Probab=97.54  E-value=0.00083  Score=50.26  Aligned_cols=80  Identities=16%  Similarity=0.196  Sum_probs=50.9

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCC-HHHHHHHHHhc---CCC-e--eEecCCCccHHHHHHhHC--CCC
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGS-KDKVDLLKNKF---GFD-E--AFNYKEEPDLDAALKRYF--PEG   88 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s-~~~~~~~~~~~---g~~-~--v~~~~~~~~~~~~~~~~~--~~~   88 (208)
                      .+.++||+||+|++|..+++.+...|++|+.++++ .++.+.+.+++   +.. .  ..|..+...+.+.+.+..  .++
T Consensus         8 ~~k~vlItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~~   87 (258)
T PRK09134          8 APRAALVTGAARRIGRAIALDLAAHGFDVAVHYNRSRDEAEALAAEIRALGRRAVALQADLADEAEVRALVARASAALGP   87 (258)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            46789999999999999998888899999887654 33433332122   332 1  234444323333333322  136


Q ss_pred             ccEEEeCCC
Q 028523           89 INIYFENVG   97 (208)
Q Consensus        89 ~d~v~d~~g   97 (208)
                      +|++|.+.|
T Consensus        88 iD~vi~~ag   96 (258)
T PRK09134         88 ITLLVNNAS   96 (258)
T ss_pred             CCEEEECCc
Confidence            999999987

>PRK07201 short chain dehydrogenase; Provisional

Probab=97.54  E-value=0.00063  Score=57.95  Aligned_cols=80  Identities=19%  Similarity=0.298  Sum_probs=55.3

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhc---CCCe---eEecCCCccHHHHHHhHCC--CCc
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKF---GFDE---AFNYKEEPDLDAALKRYFP--EGI   89 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~---g~~~---v~~~~~~~~~~~~~~~~~~--~~~   89 (208)
                      .+.+++|+||+|++|...++.+...|++|+++++++++.+.+.+++   +...   ..|..+..++.+.+.+...  +++
T Consensus       370 ~~k~vlItGas~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~i  449 (657)
T PRK07201        370 VGKVVLITGASSGIGRATAIKVAEAGATVFLVARNGEALDELVAEIRAKGGTAHAYTCDLTDSAAVDHTVKDILAEHGHV  449 (657)
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHhcCCC
Confidence            3678999999999999999888888999999999988766554332   3221   2344443233333333322  269


Q ss_pred             cEEEeCCC
Q 028523           90 NIYFENVG   97 (208)
Q Consensus        90 d~v~d~~g   97 (208)
                      |+++++.|
T Consensus       450 d~li~~Ag  457 (657)
T PRK07201        450 DYLVNNAG  457 (657)
T ss_pred             CEEEECCC
Confidence            99999887

>TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase

Probab=97.54  E-value=0.00039  Score=59.30  Aligned_cols=80  Identities=19%  Similarity=0.301  Sum_probs=55.0

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhc----CCCe----eEecCCCccHHHHHHhHC--CC
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKF----GFDE----AFNYKEEPDLDAALKRYF--PE   87 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~----g~~~----v~~~~~~~~~~~~~~~~~--~~   87 (208)
                      .+.++||+||+|++|...++.+...|++|++++++.++.+.+.+++    +...    ..|..+...+.+.+.+..  -+
T Consensus       413 ~gkvvLVTGasggIG~aiA~~La~~Ga~Vvi~~r~~~~~~~~~~~l~~~~~~~~~~~v~~Dvtd~~~v~~a~~~i~~~~g  492 (676)
T TIGR02632       413 ARRVAFVTGGAGGIGRETARRLAAEGAHVVLADLNLEAAEAVAAEINGQFGAGRAVALKMDVTDEQAVKAAFADVALAYG  492 (676)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhhcCCCcEEEEECCCCCHHHHHHHHHHHHHhcC
Confidence            4789999999999999999888888999999999887765543232    3211    234443323333333332  13


Q ss_pred             CccEEEeCCC
Q 028523           88 GINIYFENVG   97 (208)
Q Consensus        88 ~~d~v~d~~g   97 (208)
                      ++|++|++.|
T Consensus       493 ~iDilV~nAG  502 (676)
T TIGR02632       493 GVDIVVNNAG  502 (676)
T ss_pred             CCcEEEECCC
Confidence            6999999987

>PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=97.53  E-value=0.00069  Score=50.40  Aligned_cols=80  Identities=19%  Similarity=0.222  Sum_probs=50.9

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeC-CHHHHHHHHHhcCCC-e--eEecCCCccHHHHHHhH---CCCCcc
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAG-SKDKVDLLKNKFGFD-E--AFNYKEEPDLDAALKRY---FPEGIN   90 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~-s~~~~~~~~~~~g~~-~--v~~~~~~~~~~~~~~~~---~~~~~d   90 (208)
                      .+.+++|+||+|++|...+..+...|++|+.+.+ ++++.+.+.++++.. .  ..|..+.+.+.+.+.+.   .+.++|
T Consensus         4 ~~k~ilItGas~gIG~~la~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~id   83 (253)
T PRK08642          4 SEQTVLVTGGSRGLGAAIARAFAREGARVVVNYHQSEDAAEALADELGDRAIALQADVTDREQVQAMFATATEHFGKPIT   83 (253)
T ss_pred             CCCEEEEeCCCCcHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHHhCCCCe
Confidence            3568999999999999999988888999987654 455544444345422 1  12443332333333332   222499


Q ss_pred             EEEeCCC
Q 028523           91 IYFENVG   97 (208)
Q Consensus        91 ~v~d~~g   97 (208)
                      ++|.+.|
T Consensus        84 ~li~~ag   90 (253)
T PRK08642         84 TVVNNAL   90 (253)
T ss_pred             EEEECCC
Confidence            9999875

>KOG1200 consensus Mitochondrial/plastidial beta-ketoacyl-ACP reductase [Lipid transport and metabolism]

Probab=97.53  E-value=0.00086  Score=47.35  Aligned_cols=79  Identities=14%  Similarity=0.200  Sum_probs=54.9

Q ss_pred             CCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCC--Ce---eEecCCCccHHHHHHhHCC--CCccE
Q 028523           19 GEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGF--DE---AFNYKEEPDLDAALKRYFP--EGINI   91 (208)
Q Consensus        19 g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~--~~---v~~~~~~~~~~~~~~~~~~--~~~d~   91 (208)
                      ....+|+||++++|.+..|.....|++|.+.+.+.+..+.....+|.  ++   -.|.++..+....+++...  +.+++
T Consensus        14 sk~~~vtGg~sGIGrAia~~la~~Garv~v~dl~~~~A~ata~~L~g~~~h~aF~~DVS~a~~v~~~l~e~~k~~g~psv   93 (256)
T KOG1200|consen   14 SKVAAVTGGSSGIGRAIAQLLAKKGARVAVADLDSAAAEATAGDLGGYGDHSAFSCDVSKAHDVQNTLEEMEKSLGTPSV   93 (256)
T ss_pred             cceeEEecCCchHHHHHHHHHHhcCcEEEEeecchhhHHHHHhhcCCCCccceeeeccCcHHHHHHHHHHHHHhcCCCcE
Confidence            35578999999999999999999999999999777665554436765  22   2344443233332333322  26899


Q ss_pred             EEeCCC
Q 028523           92 YFENVG   97 (208)
Q Consensus        92 v~d~~g   97 (208)
                      +++|.|
T Consensus        94 lVncAG   99 (256)
T KOG1200|consen   94 LVNCAG   99 (256)
T ss_pred             EEEcCc
Confidence            999998

>TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase

Probab=97.53  E-value=0.00056  Score=50.51  Aligned_cols=78  Identities=19%  Similarity=0.282  Sum_probs=49.1

Q ss_pred             CEEEEecCCchHHHHHHHHHHHcCCEEEEEeC-CHHHHHHHHHhc---CCC---eeEecCCCccHHHHHHhHC--CCCcc
Q 028523           20 EYVFVSAASGAVGQLVGQFAKLVGCYVVGSAG-SKDKVDLLKNKF---GFD---EAFNYKEEPDLDAALKRYF--PEGIN   90 (208)
Q Consensus        20 ~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~-s~~~~~~~~~~~---g~~---~v~~~~~~~~~~~~~~~~~--~~~~d   90 (208)
                      .++||+||+|++|...++.+...|++|+++.+ ++++.+...+++   +..   ...|..+...+.+.+....  .+++|
T Consensus         1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   80 (242)
T TIGR01829         1 RIALVTGGMGGIGTAICQRLAKDGYRVAANCGPNEERAEAWLQEQGALGFDFRVVEGDVSSFESCKAAVAKVEAELGPID   80 (242)
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhhCCceEEEEecCCCHHHHHHHHHHHHHHcCCCc
Confidence            36899999999999999999889999998887 444333322122   211   1234443312333333322  13689


Q ss_pred             EEEeCCC
Q 028523           91 IYFENVG   97 (208)
Q Consensus        91 ~v~d~~g   97 (208)
                      ++|.+.|
T Consensus        81 ~vi~~ag   87 (242)
T TIGR01829        81 VLVNNAG   87 (242)
T ss_pred             EEEECCC
Confidence            9999987

(R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families.

>PF01262 AlaDh_PNT_C: Alanine dehydrogenase/PNT, C-terminal domain; InterPro: IPR007698 Alanine dehydrogenases (1

Probab=97.52  E-value=0.0006  Score=47.73  Aligned_cols=101  Identities=20%  Similarity=0.222  Sum_probs=67.0

Q ss_pred             CCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeEe-cCC---------------CccHHHHHH
Q 028523           19 GEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFN-YKE---------------EPDLDAALK   82 (208)
Q Consensus        19 g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~v~~-~~~---------------~~~~~~~~~   82 (208)
                      .-.|+|+|+ |.+|+.|+++++.+|++++..+..+++.+... ..+...+.. +.+               ...+...+.
T Consensus        20 p~~vvv~G~-G~vg~gA~~~~~~lGa~v~~~d~~~~~~~~~~-~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~   97 (168)
T PF01262_consen   20 PAKVVVTGA-GRVGQGAAEIAKGLGAEVVVPDERPERLRQLE-SLGAYFIEVDYEDHLERKDFDKADYYEHPESYESNFA   97 (168)
T ss_dssp             T-EEEEEST-SHHHHHHHHHHHHTT-EEEEEESSHHHHHHHH-HTTTEESEETTTTTTTSB-CCHHHCHHHCCHHHHHHH
T ss_pred             CeEEEEECC-CHHHHHHHHHHhHCCCEEEeccCCHHHHHhhh-cccCceEEEcccccccccccchhhhhHHHHHhHHHHH
Confidence            367889895 99999999999999999999999998888887 666643322 100               102222333


Q ss_pred             hHCCCCccEEEeCCC--c---h--hHHHHHHhhccCCEEEEEecccc
Q 028523           83 RYFPEGINIYFENVG--G---K--MLDAVLLNMRIQGRITLCGMISQ  122 (208)
Q Consensus        83 ~~~~~~~d~v~d~~g--~---~--~~~~~~~~l~~~G~~v~~g~~~~  122 (208)
                      +... .+|++|.+.-  +   +  .-.+.++.|+++..++.+....+
T Consensus        98 ~~i~-~~d~vI~~~~~~~~~~P~lvt~~~~~~m~~gsvIvDis~D~g  143 (168)
T PF01262_consen   98 EFIA-PADIVIGNGLYWGKRAPRLVTEEMVKSMKPGSVIVDISCDQG  143 (168)
T ss_dssp             HHHH-H-SEEEEHHHBTTSS---SBEHHHHHTSSTTEEEEETTGGGT
T ss_pred             HHHh-hCcEEeeecccCCCCCCEEEEhHHhhccCCCceEEEEEecCC
Confidence            2221 3799885321  2   1  34678889999999999887665

4.1.1 from EC) and pyridine nucleotide transhydrogenase (1.6.1.1 from EC) have been shown to share regions of similarity []. Alanine dehydrogenase catalyzes the NAD-dependent reversible reductive amination of pyruvate into alanine. Pyridine nucleotide transhydrogenase catalyzes the reduction of NADP+ to NADPH with the concomitant oxidation of NADH to NAD+. This enzyme is located in the plasma membrane of prokaryotes and in the inner membrane of the mitochondria of eukaryotes. The transhydrogenation between NADH and NADP is coupled with the translocation of a proton across the membrane. In prokaryotes the enzyme is composed of two different subunits, an alpha chain (gene pntA) and a beta chain (gene pntB), while in eukaryotes it is a single chain protein. The sequence of alanine dehydrogenase from several bacterial species are related with those of the alpha subunit of bacterial pyridine nucleotide transhydrogenase and of the N-terminal half of the eukaryotic enzyme. The two most conserved regions correspond respectively to the N-terminal extremity of these proteins and to a central glycine-rich region which is part of the NAD(H)-binding site. This is a C-terminal domain of alanine dehydrogenases (1.4.1.1 from EC). This domain is also found in the lysine 2-oxoglutarate reductases. ; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1KOL_A 2EEZ_F 1L7E_C 1PTJ_B 1NM5_A 1HZZ_B 1U2G_B 2FSV_A 2FR8_A 1U2D_A ....

>KOG1208 consensus Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport and catabolism]

Probab=97.52  E-value=0.00065  Score=52.31  Aligned_cols=104  Identities=14%  Similarity=0.217  Sum_probs=69.0

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCC----Ce----eEecCCCccHHHHHHhHC--CC
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGF----DE----AFNYKEEPDLDAALKRYF--PE   87 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~----~~----v~~~~~~~~~~~~~~~~~--~~   87 (208)
                      .|.+++|+|+++|+|..+++-+...|++|+.++|+.++.+.+.+++..    ..    .+|-.+.........++.  ..
T Consensus        34 ~~~~~vVTGansGIG~eta~~La~~Ga~Vv~~~R~~~~~~~~~~~i~~~~~~~~i~~~~lDLssl~SV~~fa~~~~~~~~  113 (314)
T KOG1208|consen   34 SGKVALVTGATSGIGFETARELALRGAHVVLACRNEERGEEAKEQIQKGKANQKIRVIQLDLSSLKSVRKFAEEFKKKEG  113 (314)
T ss_pred             CCcEEEEECCCCchHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCHHHHHHHHHHHHhcCC
Confidence            567899999999999999999999999999999998776666544432    11    223333211222222222  22


Q ss_pred             CccEEEeCCCc--h----------------------hHHHHHHhhccC--CEEEEEeccc
Q 028523           88 GINIYFENVGG--K----------------------MLDAVLLNMRIQ--GRITLCGMIS  121 (208)
Q Consensus        88 ~~d~v~d~~g~--~----------------------~~~~~~~~l~~~--G~~v~~g~~~  121 (208)
                      +.|+.|+.+|-  .                      ..+..++.|+..  +|+|.+++..
T Consensus       114 ~ldvLInNAGV~~~~~~~t~DG~E~~~~tN~lg~flLt~lLlp~lk~s~~~RIV~vsS~~  173 (314)
T KOG1208|consen  114 PLDVLINNAGVMAPPFSLTKDGLELTFATNYLGHFLLTELLLPLLKRSAPSRIVNVSSIL  173 (314)
T ss_pred             CccEEEeCcccccCCcccCccchhheehhhhHHHHHHHHHHHHHHhhCCCCCEEEEcCcc
Confidence            78999988761  1                      134566666654  8999988744

>PRK07069 short chain dehydrogenase; Validated

Probab=97.51  E-value=0.00062  Score=50.61  Aligned_cols=76  Identities=18%  Similarity=0.305  Sum_probs=50.2

Q ss_pred             EEEecCCchHHHHHHHHHHHcCCEEEEEeCC-HHHHHHHHHhc----CCCe----eEecCCCccHHHHHHhHCC--CCcc
Q 028523           22 VFVSAASGAVGQLVGQFAKLVGCYVVGSAGS-KDKVDLLKNKF----GFDE----AFNYKEEPDLDAALKRYFP--EGIN   90 (208)
Q Consensus        22 vli~ga~g~vG~~a~qla~~~g~~v~~~~~s-~~~~~~~~~~~----g~~~----v~~~~~~~~~~~~~~~~~~--~~~d   90 (208)
                      ++|+||+|++|...++.+...|++|++++++ .+..+.+.+++    +...    ..|..+.+.+.+.+.+...  +++|
T Consensus         2 ilVtG~~~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   81 (251)
T PRK07069          2 AFITGAAGGLGRAIARRMAEQGAKVFLTDINDAAGLDAFAAEINAAHGEGVAFAAVQDVTDEAQWQALLAQAADAMGGLS   81 (251)
T ss_pred             EEEECCCChHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCCceEEEEEeecCCHHHHHHHHHHHHHHcCCcc
Confidence            7999999999999998888889999999987 55554443232    2211    2344443234333333322  3689


Q ss_pred             EEEeCCC
Q 028523           91 IYFENVG   97 (208)
Q Consensus        91 ~v~d~~g   97 (208)
                      +++.+.|
T Consensus        82 ~vi~~ag   88 (251)
T PRK07069         82 VLVNNAG   88 (251)
T ss_pred             EEEECCC
Confidence            9999987

>PRK08264 short chain dehydrogenase; Validated

Probab=97.51  E-value=0.00077  Score=49.73  Aligned_cols=75  Identities=20%  Similarity=0.271  Sum_probs=51.2

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHhcCCC-e--eEecCCCccHHHHHHhHCCCCccEEE
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGC-YVVGSAGSKDKVDLLKNKFGFD-E--AFNYKEEPDLDAALKRYFPEGINIYF   93 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~-~v~~~~~s~~~~~~~~~~~g~~-~--v~~~~~~~~~~~~~~~~~~~~~d~v~   93 (208)
                      .+.+++|+||+|++|...++.+...|+ +|+++.++.++.+.    .+.. .  ..|..+...+.+.+.. . +.+|++|
T Consensus         5 ~~~~vlItGgsg~iG~~la~~l~~~G~~~V~~~~r~~~~~~~----~~~~~~~~~~D~~~~~~~~~~~~~-~-~~id~vi   78 (238)
T PRK08264          5 KGKVVLVTGANRGIGRAFVEQLLARGAAKVYAAARDPESVTD----LGPRVVPLQLDVTDPASVAAAAEA-A-SDVTILV   78 (238)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCcccEEEEecChhhhhh----cCCceEEEEecCCCHHHHHHHHHh-c-CCCCEEE
Confidence            467899999999999999999988999 99999988765442    2221 1  2344443123322222 1 2589999


Q ss_pred             eCCCc
Q 028523           94 ENVGG   98 (208)
Q Consensus        94 d~~g~   98 (208)
                      .+.|.
T Consensus        79 ~~ag~   83 (238)
T PRK08264         79 NNAGI   83 (238)
T ss_pred             ECCCc
Confidence            98875

>PRK06523 short chain dehydrogenase; Provisional

Probab=97.51  E-value=0.00026  Score=53.00  Aligned_cols=76  Identities=20%  Similarity=0.259  Sum_probs=49.7

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCC-eeEecCCCccHHHHHHhHCC--CCccEEEe
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFD-EAFNYKEEPDLDAALKRYFP--EGINIYFE   94 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~-~v~~~~~~~~~~~~~~~~~~--~~~d~v~d   94 (208)
                      +|.++||+||+|++|...++.+...|++|+++++++++.  ..  -... ...|..+.+.....+.+...  +++|++++
T Consensus         8 ~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~r~~~~~--~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~   83 (260)
T PRK06523          8 AGKRALVTGGTKGIGAATVARLLEAGARVVTTARSRPDD--LP--EGVEFVAADLTTAEGCAAVARAVLERLGGVDILVH   83 (260)
T ss_pred             CCCEEEEECCCCchhHHHHHHHHHCCCEEEEEeCChhhh--cC--CceeEEecCCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence            578999999999999999998888899999999876431  11  0111 12344433123322222211  36999999


Q ss_pred             CCC
Q 028523           95 NVG   97 (208)
Q Consensus        95 ~~g   97 (208)
                      +.|
T Consensus        84 ~ag   86 (260)
T PRK06523         84 VLG   86 (260)
T ss_pred             CCc
Confidence            887

>PLN02781 Probable caffeoyl-CoA O-methyltransferase

Probab=97.50  E-value=0.003  Score=46.72  Aligned_cols=102  Identities=14%  Similarity=0.141  Sum_probs=69.2

Q ss_pred             HhcCCCCCCEEEEecCCchHHHHHHHHHHHcC--CEEEEEeCCHHHHHHHHH---hcCCCeeEecCCCccHHHHHHhHC-
Q 028523           12 EVCSPKQGEYVFVSAASGAVGQLVGQFAKLVG--CYVVGSAGSKDKVDLLKN---KFGFDEAFNYKEEPDLDAALKRYF-   85 (208)
Q Consensus        12 ~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g--~~v~~~~~s~~~~~~~~~---~~g~~~v~~~~~~~~~~~~~~~~~-   85 (208)
                      .+.+..++++||-.|  ++.|..++.+++.++  .+|+.++.+++..+.+++   +.|...-+..... +..+.+.++. 
T Consensus        62 ~l~~~~~~~~vLEiG--t~~G~s~l~la~~~~~~g~v~tiD~d~~~~~~A~~n~~~~gl~~~i~~~~g-da~~~L~~l~~  138 (234)
T PLN02781         62 MLVKIMNAKNTLEIG--VFTGYSLLTTALALPEDGRITAIDIDKEAYEVGLEFIKKAGVDHKINFIQS-DALSALDQLLN  138 (234)
T ss_pred             HHHHHhCCCEEEEec--CcccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEc-cHHHHHHHHHh
Confidence            445667788999888  567777778887763  499999999988777764   3454332223233 4445454442 


Q ss_pred             ---CCCccEEEeCCC----chhHHHHHHhhccCCEEEE
Q 028523           86 ---PEGINIYFENVG----GKMLDAVLLNMRIQGRITL  116 (208)
Q Consensus        86 ---~~~~d~v~d~~g----~~~~~~~~~~l~~~G~~v~  116 (208)
                         .+.||+||--..    ...+..+++.|++||.++.
T Consensus       139 ~~~~~~fD~VfiDa~k~~y~~~~~~~~~ll~~GG~ii~  176 (234)
T PLN02781        139 NDPKPEFDFAFVDADKPNYVHFHEQLLKLVKVGGIIAF  176 (234)
T ss_pred             CCCCCCCCEEEECCCHHHHHHHHHHHHHhcCCCeEEEE
Confidence               237999986543    2367888999999998775

>PRK07102 short chain dehydrogenase; Provisional

Probab=97.49  E-value=0.001  Score=49.32  Aligned_cols=77  Identities=12%  Similarity=0.169  Sum_probs=50.8

Q ss_pred             CEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhc----CCC-e--eEecCCCccHHHHHHhHCCCCccEE
Q 028523           20 EYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKF----GFD-E--AFNYKEEPDLDAALKRYFPEGINIY   92 (208)
Q Consensus        20 ~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~----g~~-~--v~~~~~~~~~~~~~~~~~~~~~d~v   92 (208)
                      .+++|+||+|++|...++.+...|++|+++++++++.+...+++    +.. .  ..|..+..++.+.+.+.. ..+|++
T Consensus         2 ~~vlItGas~giG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~-~~~d~v   80 (243)
T PRK07102          2 KKILIIGATSDIARACARRYAAAGARLYLAARDVERLERLADDLRARGAVAVSTHELDILDTASHAAFLDSLP-ALPDIV   80 (243)
T ss_pred             cEEEEEcCCcHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHhcCCeEEEEecCCCChHHHHHHHHHHh-hcCCEE
Confidence            47999999999999999988888999999999887665443222    111 1  234343313333333322 247999


Q ss_pred             EeCCC
Q 028523           93 FENVG   97 (208)
Q Consensus        93 ~d~~g   97 (208)
                      +.+.|
T Consensus        81 v~~ag   85 (243)
T PRK07102         81 LIAVG   85 (243)
T ss_pred             EECCc
Confidence            98776

>TIGR00438 rrmJ cell division protein FtsJ

Probab=97.48  E-value=0.0029  Score=45.14  Aligned_cols=98  Identities=15%  Similarity=0.149  Sum_probs=60.4

Q ss_pred             hcCCCCCCEEEEecCCchHHHHHHHHHHHc-C-CEEEEEeCCHHHHHHHHHhcCCCe-eEecCCCccHHHHHHhHCCC-C
Q 028523           13 VCSPKQGEYVFVSAASGAVGQLVGQFAKLV-G-CYVVGSAGSKDKVDLLKNKFGFDE-AFNYKEEPDLDAALKRYFPE-G   88 (208)
Q Consensus        13 ~~~~~~g~~vli~ga~g~vG~~a~qla~~~-g-~~v~~~~~s~~~~~~~~~~~g~~~-v~~~~~~~~~~~~~~~~~~~-~   88 (208)
                      ...+++|++||..|+ |+ |..+..+++.. + .+|++++.++..    . ..+... ..|..+. ...+.+.+..+. +
T Consensus        27 ~~~i~~g~~VLDiG~-Gt-G~~~~~l~~~~~~~~~v~~vDis~~~----~-~~~i~~~~~d~~~~-~~~~~l~~~~~~~~   98 (188)
T TIGR00438        27 FKLIKPGDTVLDLGA-AP-GGWSQVAVEQVGGKGRVIAVDLQPMK----P-IENVDFIRGDFTDE-EVLNKIRERVGDDK   98 (188)
T ss_pred             hcccCCCCEEEEecC-CC-CHHHHHHHHHhCCCceEEEEeccccc----c-CCCceEEEeeCCCh-hHHHHHHHHhCCCC
Confidence            346789999999994 43 33445555444 3 489999988753    1 223322 1243333 334445444444 7


Q ss_pred             ccEEEeC-C----C-------------chhHHHHHHhhccCCEEEEEe
Q 028523           89 INIYFEN-V----G-------------GKMLDAVLLNMRIQGRITLCG  118 (208)
Q Consensus        89 ~d~v~d~-~----g-------------~~~~~~~~~~l~~~G~~v~~g  118 (208)
                      +|+|+.. .    |             ...+..++++|++||+++...
T Consensus        99 ~D~V~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lvi~~  146 (188)
T TIGR00438        99 VDVVMSDAAPNISGYWDIDHLRSIDLVELALDIAKEVLKPKGNFVVKV  146 (188)
T ss_pred             ccEEEcCCCCCCCCCccccHHHHHHHHHHHHHHHHHHccCCCEEEEEE
Confidence            9999952 1    2             135677899999999998754

>TIGR02415 23BDH acetoin reductases

Probab=97.48  E-value=0.00063  Score=50.70  Aligned_cols=77  Identities=12%  Similarity=0.182  Sum_probs=51.1

Q ss_pred             EEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHh---cCCC-e--eEecCCCccHHHHHHhHCC--CCccEE
Q 028523           21 YVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNK---FGFD-E--AFNYKEEPDLDAALKRYFP--EGINIY   92 (208)
Q Consensus        21 ~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~---~g~~-~--v~~~~~~~~~~~~~~~~~~--~~~d~v   92 (208)
                      +++|+|++|++|...++.+...|++|+.+.+++++.+.+.++   .+.. .  ..|..+...+.+.+.+...  +++|++
T Consensus         2 ~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~id~v   81 (254)
T TIGR02415         2 VALVTGGAQGIGKGIAERLAKDGFAVAVADLNEETAKETAKEINQAGGKAVAYKLDVSDKDQVFSAIDQAAEKFGGFDVM   81 (254)
T ss_pred             EEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            689999999999999988888999999999887665443322   2322 1  2344443223333333321  268999


Q ss_pred             EeCCC
Q 028523           93 FENVG   97 (208)
Q Consensus        93 ~d~~g   97 (208)
                      |.+.|
T Consensus        82 i~~ag   86 (254)
T TIGR02415        82 VNNAG   86 (254)
T ss_pred             EECCC
Confidence            99887

One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733).

>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=97.47  E-value=0.0011  Score=49.10  Aligned_cols=80  Identities=21%  Similarity=0.344  Sum_probs=50.2

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHH-HHHHHHh---cCCC-eeE--ecCCCccHHHHHHhHCC--CC
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDK-VDLLKNK---FGFD-EAF--NYKEEPDLDAALKRYFP--EG   88 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~-~~~~~~~---~g~~-~v~--~~~~~~~~~~~~~~~~~--~~   88 (208)
                      ++.+++|+|++|++|...++.+...|++|+++.++... .+...+.   .+.. ..+  |..+...+.+.+.+...  ++
T Consensus         4 ~~~~vlItG~sg~iG~~l~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   83 (248)
T PRK05557          4 EGKVALVTGASRGIGRAIAERLAAQGANVVINYASSEAGAEALVAEIGALGGKALAVQGDVSDAESVERAVDEAKAEFGG   83 (248)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            45689999999999999999998889999777766542 2222212   2322 122  44443233333333322  26


Q ss_pred             ccEEEeCCC
Q 028523           89 INIYFENVG   97 (208)
Q Consensus        89 ~d~v~d~~g   97 (208)
                      +|.++.+.|
T Consensus        84 id~vi~~ag   92 (248)
T PRK05557         84 VDILVNNAG   92 (248)
T ss_pred             CCEEEECCC
Confidence            899999887

>PRK08936 glucose-1-dehydrogenase; Provisional

Probab=97.46  E-value=0.00084  Score=50.33  Aligned_cols=80  Identities=16%  Similarity=0.197  Sum_probs=51.1

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHH-HHHHHHH---hcCCCe---eEecCCCccHHHHHHhHCC--CC
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKD-KVDLLKN---KFGFDE---AFNYKEEPDLDAALKRYFP--EG   88 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~-~~~~~~~---~~g~~~---v~~~~~~~~~~~~~~~~~~--~~   88 (208)
                      ++.+++|+||++++|...++.+...|++|+.+.++.. ..+.+.+   ..+...   ..|..+.....+.+.....  ++
T Consensus         6 ~~k~~lItGa~~gIG~~ia~~l~~~G~~vvi~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~g~   85 (261)
T PRK08936          6 EGKVVVITGGSTGLGRAMAVRFGKEKAKVVINYRSDEEEANDVAEEIKKAGGEAIAVKGDVTVESDVVNLIQTAVKEFGT   85 (261)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence            5789999999999999999999999999888877543 2222221   223321   2344443223333333222  36


Q ss_pred             ccEEEeCCC
Q 028523           89 INIYFENVG   97 (208)
Q Consensus        89 ~d~v~d~~g   97 (208)
                      +|+++.+.|
T Consensus        86 id~lv~~ag   94 (261)
T PRK08936         86 LDVMINNAG   94 (261)
T ss_pred             CCEEEECCC
Confidence            999999887

>TIGR00406 prmA ribosomal protein L11 methyltransferase

Probab=97.45  E-value=0.00057  Score=52.18  Aligned_cols=97  Identities=16%  Similarity=0.179  Sum_probs=62.3

Q ss_pred             CCCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHhc---CCCeeEecCCCccHHHHHHhHCCCCccE
Q 028523           16 PKQGEYVFVSAASGAVGQLVGQFAKLVGC-YVVGSAGSKDKVDLLKNKF---GFDEAFNYKEEPDLDAALKRYFPEGINI   91 (208)
Q Consensus        16 ~~~g~~vli~ga~g~vG~~a~qla~~~g~-~v~~~~~s~~~~~~~~~~~---g~~~v~~~~~~~~~~~~~~~~~~~~~d~   91 (208)
                      ..++++||-.|. |. |..++.+++ .|+ +|++++.++...+.+++.+   +....+..... +    ......++||+
T Consensus       157 ~~~g~~VLDvGc-Gs-G~lai~aa~-~g~~~V~avDid~~al~~a~~n~~~n~~~~~~~~~~~-~----~~~~~~~~fDl  228 (288)
T TIGR00406       157 DLKDKNVIDVGC-GS-GILSIAALK-LGAAKVVGIDIDPLAVESARKNAELNQVSDRLQVKLI-Y----LEQPIEGKADV  228 (288)
T ss_pred             cCCCCEEEEeCC-Ch-hHHHHHHHH-cCCCeEEEEECCHHHHHHHHHHHHHcCCCcceEEEec-c----cccccCCCceE
Confidence            457899999984 44 877776665 466 9999999988777776422   22111111111 1    11122337999


Q ss_pred             EEeCCCch----hHHHHHHhhccCCEEEEEecc
Q 028523           92 YFENVGGK----MLDAVLLNMRIQGRITLCGMI  120 (208)
Q Consensus        92 v~d~~g~~----~~~~~~~~l~~~G~~v~~g~~  120 (208)
                      |+......    .+..+.+.|+|||.++..|..
T Consensus       229 Vvan~~~~~l~~ll~~~~~~LkpgG~li~sgi~  261 (288)
T TIGR00406       229 IVANILAEVIKELYPQFSRLVKPGGWLILSGIL  261 (288)
T ss_pred             EEEecCHHHHHHHHHHHHHHcCCCcEEEEEeCc
Confidence            99765432    466778999999999887653

Ribosomal protein L11 methyltransferase is an S-adenosyl-L-methionine-dependent methyltransferase required for the modification of ribosomal protein L11. This protein is found in bacteria and (with a probable transit peptide) in Arabidopsis.

>PLN02589 caffeoyl-CoA O-methyltransferase

Probab=97.45  E-value=0.0041  Score=46.28  Aligned_cols=102  Identities=10%  Similarity=0.089  Sum_probs=71.6

Q ss_pred             HhcCCCCCCEEEEecCCchHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHH---hcCCCeeEecCCCccHHHHHHhHC-
Q 028523           12 EVCSPKQGEYVFVSAASGAVGQLVGQFAKLV--GCYVVGSAGSKDKVDLLKN---KFGFDEAFNYKEEPDLDAALKRYF-   85 (208)
Q Consensus        12 ~~~~~~~g~~vli~ga~g~vG~~a~qla~~~--g~~v~~~~~s~~~~~~~~~---~~g~~~v~~~~~~~~~~~~~~~~~-   85 (208)
                      .+.+....++||-.|  ..+|..++.+++.+  +.+++.+..+++..+.+++   +.|...-+..... +..+.+.++. 
T Consensus        73 ~l~~~~~ak~iLEiG--T~~GySal~la~al~~~g~v~tiE~~~~~~~~Ar~~~~~ag~~~~I~~~~G-~a~e~L~~l~~  149 (247)
T PLN02589         73 MLLKLINAKNTMEIG--VYTGYSLLATALALPEDGKILAMDINRENYELGLPVIQKAGVAHKIDFREG-PALPVLDQMIE  149 (247)
T ss_pred             HHHHHhCCCEEEEEe--ChhhHHHHHHHhhCCCCCEEEEEeCCHHHHHHHHHHHHHCCCCCceEEEec-cHHHHHHHHHh
Confidence            334556678899998  68899999999887  4699999999887776654   3465443344444 5555555543 


Q ss_pred             ----CCCccEEEeCCCc----hhHHHHHHhhccCCEEEE
Q 028523           86 ----PEGINIYFENVGG----KMLDAVLLNMRIQGRITL  116 (208)
Q Consensus        86 ----~~~~d~v~d~~g~----~~~~~~~~~l~~~G~~v~  116 (208)
                          .+.||.||--...    ..++.++++|++||.++.
T Consensus       150 ~~~~~~~fD~iFiDadK~~Y~~y~~~~l~ll~~GGviv~  188 (247)
T PLN02589        150 DGKYHGTFDFIFVDADKDNYINYHKRLIDLVKVGGVIGY  188 (247)
T ss_pred             ccccCCcccEEEecCCHHHhHHHHHHHHHhcCCCeEEEE
Confidence                1379999865552    257888999999998765

>TIGR00080 pimt protein-L-isoaspartate(D-aspartate) O-methyltransferase

Probab=97.44  E-value=0.0038  Score=45.55  Aligned_cols=102  Identities=17%  Similarity=0.188  Sum_probs=66.2

Q ss_pred             HHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC--EEEEEeCCHHHHHHHHH---hcCCCeeEecCCCccHHHHHHhH
Q 028523           10 FFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGC--YVVGSAGSKDKVDLLKN---KFGFDEAFNYKEEPDLDAALKRY   84 (208)
Q Consensus        10 l~~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g~--~v~~~~~s~~~~~~~~~---~~g~~~v~~~~~~~~~~~~~~~~   84 (208)
                      +.....++++++||-.|  .|.|..++.+++..+.  +|+.++.+++-.+.+++   ++|.+.+- .... +..+...  
T Consensus        69 ~~~~l~~~~~~~VLDiG--~GsG~~a~~la~~~~~~g~V~~vD~~~~~~~~A~~~~~~~g~~~v~-~~~~-d~~~~~~--  142 (215)
T TIGR00080        69 MTELLELKPGMKVLEIG--TGSGYQAAVLAEIVGRDGLVVSIERIPELAEKAERRLRKLGLDNVI-VIVG-DGTQGWE--  142 (215)
T ss_pred             HHHHhCCCCcCEEEEEC--CCccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHCCCCCeE-EEEC-CcccCCc--
Confidence            33556789999999988  4668888888887654  79999999887766653   34443211 1111 2111111  


Q ss_pred             CCCCccEEEeCCC-chhHHHHHHhhccCCEEEEE
Q 028523           85 FPEGINIYFENVG-GKMLDAVLLNMRIQGRITLC  117 (208)
Q Consensus        85 ~~~~~d~v~d~~g-~~~~~~~~~~l~~~G~~v~~  117 (208)
                      ....||+|+-... ........+.|++||+++..
T Consensus       143 ~~~~fD~Ii~~~~~~~~~~~~~~~L~~gG~lv~~  176 (215)
T TIGR00080       143 PLAPYDRIYVTAAGPKIPEALIDQLKEGGILVMP  176 (215)
T ss_pred             ccCCCCEEEEcCCcccccHHHHHhcCcCcEEEEE
Confidence            1126999886544 44566788999999998764

Among the prokaryotes, the gene name is pcm. Among eukaryotes, pimt.

>COG1052 LdhA Lactate dehydrogenase and related dehydrogenases [Energy production and conversion / Coenzyme metabolism / General function prediction only]

Probab=97.42  E-value=0.0062  Score=47.21  Aligned_cols=90  Identities=20%  Similarity=0.141  Sum_probs=65.6

Q ss_pred             CCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHHHHhHCCCCccEEEeCC
Q 028523           17 KQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENV   96 (208)
Q Consensus        17 ~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~d~v~d~~   96 (208)
                      -.|.++.|+| .|.||++.++.++..|.+|+...+++. .+..+ .+++.++       ++.+.+++     .|++.-..
T Consensus       144 l~gktvGIiG-~GrIG~avA~r~~~Fgm~v~y~~~~~~-~~~~~-~~~~~y~-------~l~ell~~-----sDii~l~~  208 (324)
T COG1052         144 LRGKTLGIIG-LGRIGQAVARRLKGFGMKVLYYDRSPN-PEAEK-ELGARYV-------DLDELLAE-----SDIISLHC  208 (324)
T ss_pred             CCCCEEEEEC-CCHHHHHHHHHHhcCCCEEEEECCCCC-hHHHh-hcCceec-------cHHHHHHh-----CCEEEEeC
Confidence            4589999999 699999999999999999999997765 22222 4544333       33333433     78887766


Q ss_pred             C-ch-----hHHHHHHhhccCCEEEEEeccc
Q 028523           97 G-GK-----MLDAVLLNMRIQGRITLCGMIS  121 (208)
Q Consensus        97 g-~~-----~~~~~~~~l~~~G~~v~~g~~~  121 (208)
                      + .+     .-...+..|++++.+|.++.-.
T Consensus       209 Plt~~T~hLin~~~l~~mk~ga~lVNtaRG~  239 (324)
T COG1052         209 PLTPETRHLINAEELAKMKPGAILVNTARGG  239 (324)
T ss_pred             CCChHHhhhcCHHHHHhCCCCeEEEECCCcc
Confidence            6 33     2467888999999999987743

>PF01596 Methyltransf_3: O-methyltransferase; InterPro: IPR002935 Members of this family are O-methyltransferases

Probab=97.42  E-value=0.00071  Score=48.86  Aligned_cols=102  Identities=14%  Similarity=0.136  Sum_probs=70.5

Q ss_pred             hcCCCCCCEEEEecCCchHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHH---hcCCCeeEecCCCccHHHHHHhHCC-
Q 028523           13 VCSPKQGEYVFVSAASGAVGQLVGQFAKLV--GCYVVGSAGSKDKVDLLKN---KFGFDEAFNYKEEPDLDAALKRYFP-   86 (208)
Q Consensus        13 ~~~~~~g~~vli~ga~g~vG~~a~qla~~~--g~~v~~~~~s~~~~~~~~~---~~g~~~v~~~~~~~~~~~~~~~~~~-   86 (208)
                      +.+.....+||-+|  +.+|..++.+++.+  +.+|+.+..+++..+.+++   ..|...-+..... +..+.+.++.. 
T Consensus        40 l~~~~~~k~vLEIG--t~~GySal~la~~l~~~g~i~tiE~~~~~~~~A~~~~~~ag~~~~I~~~~g-da~~~l~~l~~~  116 (205)
T PF01596_consen   40 LVRLTRPKRVLEIG--TFTGYSALWLAEALPEDGKITTIEIDPERAEIARENFRKAGLDDRIEVIEG-DALEVLPELAND  116 (205)
T ss_dssp             HHHHHT-SEEEEES--TTTSHHHHHHHHTSTTTSEEEEEESSHHHHHHHHHHHHHTTGGGGEEEEES--HHHHHHHHHHT
T ss_pred             HHHhcCCceEEEec--cccccHHHHHHHhhcccceEEEecCcHHHHHHHHHHHHhcCCCCcEEEEEe-ccHhhHHHHHhc
Confidence            34556778999998  67899999999987  5699999999998777764   3455433333333 45555554422 


Q ss_pred             ---CCccEEEeCCC-c---hhHHHHHHhhccCCEEEEE
Q 028523           87 ---EGINIYFENVG-G---KMLDAVLLNMRIQGRITLC  117 (208)
Q Consensus        87 ---~~~d~v~d~~g-~---~~~~~~~~~l~~~G~~v~~  117 (208)
                         +.||.||--.. .   ..+..++++|++||.++.-
T Consensus       117 ~~~~~fD~VFiDa~K~~y~~y~~~~~~ll~~ggvii~D  154 (205)
T PF01596_consen  117 GEEGQFDFVFIDADKRNYLEYFEKALPLLRPGGVIIAD  154 (205)
T ss_dssp             TTTTSEEEEEEESTGGGHHHHHHHHHHHEEEEEEEEEE
T ss_pred             cCCCceeEEEEcccccchhhHHHHHhhhccCCeEEEEc
Confidence               36999976444 2   2578889999999998763

The family includes also bacterial O-methyltransferases that may be involved in antibiotic production [].; GO: 0008171 O-methyltransferase activity; PDB: 1SUI_C 1SUS_D 3CBG_A 2GPY_B 3TR6_A 2AVD_A 3DUL_B 3DUW_B 2ZTH_A 1VID_A ....

>PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional

Probab=97.40  E-value=0.00031  Score=52.78  Aligned_cols=76  Identities=14%  Similarity=0.194  Sum_probs=50.6

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCC-eeEecCCCccHHHHHHhHCC--CCccEEEe
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFD-EAFNYKEEPDLDAALKRYFP--EGINIYFE   94 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~-~v~~~~~~~~~~~~~~~~~~--~~~d~v~d   94 (208)
                      .+.+++|+||+|++|...++.+...|++|+.+++++++.+.    .... ...|..+...+.+.+.+...  +++|++++
T Consensus         8 ~~k~vlItG~s~gIG~~la~~l~~~G~~v~~~~~~~~~~~~----~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~li~   83 (266)
T PRK06171          8 QGKIIIVTGGSSGIGLAIVKELLANGANVVNADIHGGDGQH----ENYQFVPTDVSSAEEVNHTVAEIIEKFGRIDGLVN   83 (266)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCcccccc----CceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence            46789999999999999999998999999999877654321    1111 12344443233333333221  36899999


Q ss_pred             CCC
Q 028523           95 NVG   97 (208)
Q Consensus        95 ~~g   97 (208)
                      +.|
T Consensus        84 ~Ag   86 (266)
T PRK06171         84 NAG   86 (266)
T ss_pred             CCc
Confidence            887

>PRK08309 short chain dehydrogenase; Provisional

Probab=97.40  E-value=0.023  Score=40.18  Aligned_cols=89  Identities=17%  Similarity=0.155  Sum_probs=54.1

Q ss_pred             EEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCC---e--eEecCCCccHHHHHHhHC--CCCccEEE
Q 028523           21 YVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFD---E--AFNYKEEPDLDAALKRYF--PEGINIYF   93 (208)
Q Consensus        21 ~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~---~--v~~~~~~~~~~~~~~~~~--~~~~d~v~   93 (208)
                      +++|+||+| +|...++.+...|++|+++++++++.+.+...++..   .  ..|.++.+++...+....  .+++|.+|
T Consensus         2 ~vlVtGGtG-~gg~la~~L~~~G~~V~v~~R~~~~~~~l~~~l~~~~~i~~~~~Dv~d~~sv~~~i~~~l~~~g~id~lv   80 (177)
T PRK08309          2 HALVIGGTG-MLKRVSLWLCEKGFHVSVIARREVKLENVKRESTTPESITPLPLDYHDDDALKLAIKSTIEKNGPFDLAV   80 (177)
T ss_pred             EEEEECcCH-HHHHHHHHHHHCcCEEEEEECCHHHHHHHHHHhhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCeEEE
Confidence            589999974 555566666667999999999888776655334321   1  236665434444444432  23689999


Q ss_pred             eCCCchhHHHHHHhhcc
Q 028523           94 ENVGGKMLDAVLLNMRI  110 (208)
Q Consensus        94 d~~g~~~~~~~~~~l~~  110 (208)
                      +.+-...-......++.
T Consensus        81 ~~vh~~~~~~~~~~~~~   97 (177)
T PRK08309         81 AWIHSSAKDALSVVCRE   97 (177)
T ss_pred             EeccccchhhHHHHHHH
Confidence            98765443334444444

>PF13561 adh_short_C2: Enoyl-(Acyl carrier protein) reductase; PDB: 2UV8_B 3HMJ_A 2VKZ_C 1O5I_A 2P91_C 2OP0_A 2OL4_B 1NHW_A 1NNU_B 2O2Y_B

Probab=97.40  E-value=0.0041  Score=46.07  Aligned_cols=97  Identities=20%  Similarity=0.290  Sum_probs=64.8

Q ss_pred             cCC--chHHHHHHHHHHHcCCEEEEEeCCHHH----HHHHHHhcCCCe-eEecCCCccHH---HHHHhHCCCCccEEEeC
Q 028523           26 AAS--GAVGQLVGQFAKLVGCYVVGSAGSKDK----VDLLKNKFGFDE-AFNYKEEPDLD---AALKRYFPEGINIYFEN   95 (208)
Q Consensus        26 ga~--g~vG~~a~qla~~~g~~v~~~~~s~~~----~~~~~~~~g~~~-v~~~~~~~~~~---~~~~~~~~~~~d~v~d~   95 (208)
                      |++  +++|.+.++.+...|++|+++.++.++    .+.+.++.+... .+|..+.+++.   +.+.+..++++|+++++
T Consensus         1 g~~~s~GiG~aia~~l~~~Ga~V~~~~~~~~~~~~~~~~l~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~g~iD~lV~~   80 (241)
T PF13561_consen    1 GAGSSSGIGRAIARALAEEGANVILTDRNEEKLADALEELAKEYGAEVIQCDLSDEESVEALFDEAVERFGGRIDILVNN   80 (241)
T ss_dssp             STSSTSHHHHHHHHHHHHTTEEEEEEESSHHHHHHHHHHHHHHTTSEEEESCTTSHHHHHHHHHHHHHHHCSSESEEEEE
T ss_pred             CCCCCCChHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHcCCceEeecCcchHHHHHHHHHHHhhcCCCeEEEEec
Confidence            455  899999999999999999999999987    344443566542 23333332222   23333343579999987


Q ss_pred             CCc-hh-----------------------------HHHHHHhhccCCEEEEEecccc
Q 028523           96 VGG-KM-----------------------------LDAVLLNMRIQGRITLCGMISQ  122 (208)
Q Consensus        96 ~g~-~~-----------------------------~~~~~~~l~~~G~~v~~g~~~~  122 (208)
                      .+. ..                             .+.+.+.|+++|+++.++....
T Consensus        81 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gsii~iss~~~  137 (241)
T PF13561_consen   81 AGISPPSNVEKPLLDLSEEDWDKTFDINVFSPFLLAQAALPLMKKGGSIINISSIAA  137 (241)
T ss_dssp             EESCTGGGTSSSGGGSHHHHHHHHHHHHTHHHHHHHHHHHHHHHHEEEEEEEEEGGG
T ss_pred             ccccccccCCCChHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCcccccchhh
Confidence            651 10                             2456668888999999877643

...

>PF02670 DXP_reductoisom: 1-deoxy-D-xylulose 5-phosphate reductoisomerase; InterPro: IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase synthesises 2-C-methyl-D-erythritol 4-phosphate from 1-deoxy-D-xylulose 5-phosphate in a single step by intramolecular rearrangement and reduction and is responsible for terpenoid biosynthesis in some organisms []

Probab=97.37  E-value=0.0066  Score=40.28  Aligned_cols=92  Identities=15%  Similarity=0.153  Sum_probs=57.8

Q ss_pred             EEEecCCchHHHHHHHHHHHcC--CEEEEEe--CCHHHHH-HHHHhcCCCeeEecCCCccHHHHH---------------
Q 028523           22 VFVSAASGAVGQLVGQFAKLVG--CYVVGSA--GSKDKVD-LLKNKFGFDEAFNYKEEPDLDAAL---------------   81 (208)
Q Consensus        22 vli~ga~g~vG~~a~qla~~~g--~~v~~~~--~s~~~~~-~~~~~~g~~~v~~~~~~~~~~~~~---------------   81 (208)
                      |.|+|+||+||..+.++.+...  ++|+..+  ++-+.+. .++ +|.+..++-.++.  ..+.+               
T Consensus         1 i~ILGsTGSIG~qtLdVi~~~~d~f~v~~Lsa~~n~~~L~~q~~-~f~p~~v~i~~~~--~~~~l~~~~~~~~~~~~v~~   77 (129)
T PF02670_consen    1 IAILGSTGSIGTQTLDVIRKHPDKFEVVALSAGSNIEKLAEQAR-EFKPKYVVIADEE--AYEELKKALPSKGPGIEVLS   77 (129)
T ss_dssp             EEEESTTSHHHHHHHHHHHHCTTTEEEEEEEESSTHHHHHHHHH-HHT-SEEEESSHH--HHHHHHHHHHHTTSSSEEEE
T ss_pred             CEEEcCCcHHHHHHHHHHHhCCCceEEEEEEcCCCHHHHHHHHH-HhCCCEEEEcCHH--HHHHHHHHhhhcCCCCEEEe
Confidence            5799999999999999999886  5777665  2333333 334 7877766544432  11122               


Q ss_pred             -----HhHCC-CCccEEEeCCC-chhHHHHHHhhccCCEEEE
Q 028523           82 -----KRYFP-EGINIYFENVG-GKMLDAVLLNMRIQGRITL  116 (208)
Q Consensus        82 -----~~~~~-~~~d~v~d~~g-~~~~~~~~~~l~~~G~~v~  116 (208)
                           .++.. ..+|+++.++. ..-+...+..++.|-++.+
T Consensus        78 G~~~l~~~~~~~~~D~vv~Ai~G~aGL~pt~~Ai~~gk~iaL  119 (129)
T PF02670_consen   78 GPEGLEELAEEPEVDIVVNAIVGFAGLKPTLAAIKAGKDIAL  119 (129)
T ss_dssp             SHHHHHHHHTHTT-SEEEE--SSGGGHHHHHHHHHTTSEEEE
T ss_pred             ChHHHHHHhcCCCCCEEEEeCcccchHHHHHHHHHCCCeEEE
Confidence                 22222 26899998766 4678888888887766544

In Arabidopsis thaliana 1-deoxy-D-xylulose 5-phosphate reductoisomerase is the first committed enzyme of the non-mevalonate pathway for isoprenoid biosynthesis. The enzyme requires Mn2+, Co2+ or Mg2+ for activity, with the first being most effective. This domain is found at the N terminus of bacterial and plant 1-deoxy-D-xylulose 5-phosphate reductoisomerases.; GO: 0070402 NADPH binding, 0055114 oxidation-reduction process; PDB: 1R0K_D 1R0L_C 3A14_A 3A06_A 3AUA_A 3AU9_B 3AU8_B 3IIE_A 2Y1D_B 4AIC_A ....

>PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=97.37  E-value=0.0016  Score=48.62  Aligned_cols=78  Identities=13%  Similarity=0.185  Sum_probs=49.1

Q ss_pred             CEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHH-HHHHHHHh---cCCC-e--eEecCCCccHHHHHHhHCC--CCcc
Q 028523           20 EYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKD-KVDLLKNK---FGFD-E--AFNYKEEPDLDAALKRYFP--EGIN   90 (208)
Q Consensus        20 ~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~-~~~~~~~~---~g~~-~--v~~~~~~~~~~~~~~~~~~--~~~d   90 (208)
                      ..++|+||+|++|...++.+...|++|++++++.. ..+...+.   .+.. .  ..|..+..++...+.....  +++|
T Consensus         3 k~vlItG~sg~iG~~la~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   82 (256)
T PRK12745          3 PVALVTGGRRGIGLGIARALAAAGFDLAINDRPDDEELAATQQELRALGVEVIFFPADVADLSAHEAMLDAAQAAWGRID   82 (256)
T ss_pred             cEEEEeCCCchHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHhcCCCC
Confidence            57999999999999999888888999999886543 22222112   2321 1  2344443233333333322  2689


Q ss_pred             EEEeCCC
Q 028523           91 IYFENVG   97 (208)
Q Consensus        91 ~v~d~~g   97 (208)
                      ++|.+.|
T Consensus        83 ~vi~~ag   89 (256)
T PRK12745         83 CLVNNAG   89 (256)
T ss_pred             EEEECCc
Confidence            9999876

>PRK00107 gidB 16S rRNA methyltransferase GidB; Reviewed

Probab=97.36  E-value=0.0043  Score=44.19  Aligned_cols=98  Identities=13%  Similarity=0.116  Sum_probs=63.5

Q ss_pred             CCCCCCEEEEecCCchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHH---hcCCCeeEecCCCccHHHHHHhHCCCCcc
Q 028523           15 SPKQGEYVFVSAASGAVGQLVGQFAKLV-GCYVVGSAGSKDKVDLLKN---KFGFDEAFNYKEEPDLDAALKRYFPEGIN   90 (208)
Q Consensus        15 ~~~~g~~vli~ga~g~vG~~a~qla~~~-g~~v~~~~~s~~~~~~~~~---~~g~~~v~~~~~~~~~~~~~~~~~~~~~d   90 (208)
                      .++++.+||-.|+  |.|..+..+++.. +.+|++++.+++..+.+++   +.+.+. +..... +..+ +..  .+.+|
T Consensus        42 ~l~~g~~VLDiGc--GtG~~al~la~~~~~~~V~giD~s~~~l~~A~~~~~~~~l~~-i~~~~~-d~~~-~~~--~~~fD  114 (187)
T PRK00107         42 YLPGGERVLDVGS--GAGFPGIPLAIARPELKVTLVDSLGKKIAFLREVAAELGLKN-VTVVHG-RAEE-FGQ--EEKFD  114 (187)
T ss_pred             hcCCCCeEEEEcC--CCCHHHHHHHHHCCCCeEEEEeCcHHHHHHHHHHHHHcCCCC-EEEEec-cHhh-CCC--CCCcc
Confidence            4556899998884  4566666666544 5699999999886665553   345433 222222 3322 211  23799


Q ss_pred             EEEeCCC---chhHHHHHHhhccCCEEEEEec
Q 028523           91 IYFENVG---GKMLDAVLLNMRIQGRITLCGM  119 (208)
Q Consensus        91 ~v~d~~g---~~~~~~~~~~l~~~G~~v~~g~  119 (208)
                      +|+-...   ...+..+.+.|++||+++.+-.
T Consensus       115 lV~~~~~~~~~~~l~~~~~~LkpGG~lv~~~~  146 (187)
T PRK00107        115 VVTSRAVASLSDLVELCLPLLKPGGRFLALKG  146 (187)
T ss_pred             EEEEccccCHHHHHHHHHHhcCCCeEEEEEeC
Confidence            9987433   2467788999999999988743

>PRK00517 prmA ribosomal protein L11 methyltransferase; Reviewed

Probab=97.36  E-value=0.005  Score=46.05  Aligned_cols=91  Identities=19%  Similarity=0.271  Sum_probs=60.9

Q ss_pred             CCCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHhc---CCCeeEecCCCccHHHHHHhHCCCCccE
Q 028523           16 PKQGEYVFVSAASGAVGQLVGQFAKLVGC-YVVGSAGSKDKVDLLKNKF---GFDEAFNYKEEPDLDAALKRYFPEGINI   91 (208)
Q Consensus        16 ~~~g~~vli~ga~g~vG~~a~qla~~~g~-~v~~~~~s~~~~~~~~~~~---g~~~v~~~~~~~~~~~~~~~~~~~~~d~   91 (208)
                      +.++++||-.|. |. |..++.+++ .|+ +|++++.++...+.+++.+   +....+..... +          ..||+
T Consensus       117 ~~~~~~VLDiGc-Gs-G~l~i~~~~-~g~~~v~giDis~~~l~~A~~n~~~~~~~~~~~~~~~-~----------~~fD~  182 (250)
T PRK00517        117 VLPGKTVLDVGC-GS-GILAIAAAK-LGAKKVLAVDIDPQAVEAARENAELNGVELNVYLPQG-D----------LKADV  182 (250)
T ss_pred             cCCCCEEEEeCC-cH-HHHHHHHHH-cCCCeEEEEECCHHHHHHHHHHHHHcCCCceEEEccC-C----------CCcCE
Confidence            568899999994 54 877776554 566 6999999998887776432   22111111110 0          04999


Q ss_pred             EEeCCCch----hHHHHHHhhccCCEEEEEecc
Q 028523           92 YFENVGGK----MLDAVLLNMRIQGRITLCGMI  120 (208)
Q Consensus        92 v~d~~g~~----~~~~~~~~l~~~G~~v~~g~~  120 (208)
                      |+.....+    .+..+.+.|++||.++..|..
T Consensus       183 Vvani~~~~~~~l~~~~~~~LkpgG~lilsgi~  215 (250)
T PRK00517        183 IVANILANPLLELAPDLARLLKPGGRLILSGIL  215 (250)
T ss_pred             EEEcCcHHHHHHHHHHHHHhcCCCcEEEEEECc
Confidence            98766533    456788899999999987653

>COG0169 AroE Shikimate 5-dehydrogenase [Amino acid transport and metabolism]

Probab=97.35  E-value=0.0022  Score=48.56  Aligned_cols=70  Identities=14%  Similarity=0.153  Sum_probs=51.8

Q ss_pred             CCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHhcCCCe----eEecCCCccHHHHHHhHCCC-Ccc
Q 028523           17 KQGEYVFVSAASGAVGQLVGQFAKLVGC-YVVGSAGSKDKVDLLKNKFGFDE----AFNYKEEPDLDAALKRYFPE-GIN   90 (208)
Q Consensus        17 ~~g~~vli~ga~g~vG~~a~qla~~~g~-~v~~~~~s~~~~~~~~~~~g~~~----v~~~~~~~~~~~~~~~~~~~-~~d   90 (208)
                      .+|++++|.|+ ||.+.+++.-++..|+ +++++.|+.++.+.+.+.++...    .....+.          ... .+|
T Consensus       124 ~~~~~vlilGA-GGAarAv~~aL~~~g~~~i~V~NRt~~ra~~La~~~~~~~~~~~~~~~~~~----------~~~~~~d  192 (283)
T COG0169         124 VTGKRVLILGA-GGAARAVAFALAEAGAKRITVVNRTRERAEELADLFGELGAAVEAAALADL----------EGLEEAD  192 (283)
T ss_pred             cCCCEEEEECC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhccccccccccccc----------ccccccC
Confidence            35899999996 9999999999999997 89999999999888875565321    1111111          111 389


Q ss_pred             EEEeCCC
Q 028523           91 IYFENVG   97 (208)
Q Consensus        91 ~v~d~~g   97 (208)
                      ++|++++
T Consensus       193 liINaTp  199 (283)
T COG0169         193 LLINATP  199 (283)
T ss_pred             EEEECCC
Confidence            9999987

>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase

Probab=97.35  E-value=0.0022  Score=51.14  Aligned_cols=90  Identities=16%  Similarity=0.190  Sum_probs=57.5

Q ss_pred             EEEecCCchHHHHHHHHHHHcC-C-EEEEEeCCHHHHHHHHHhc-CCC---eeEecCCCccHHHHHHhHCCCCccEEEeC
Q 028523           22 VFVSAASGAVGQLVGQFAKLVG-C-YVVGSAGSKDKVDLLKNKF-GFD---EAFNYKEEPDLDAALKRYFPEGINIYFEN   95 (208)
Q Consensus        22 vli~ga~g~vG~~a~qla~~~g-~-~v~~~~~s~~~~~~~~~~~-g~~---~v~~~~~~~~~~~~~~~~~~~~~d~v~d~   95 (208)
                      |+|+|+ |.+|..+++.+...+ . +|++.+++.++.+.+.+++ +..   ..+|..+.   .+ +.++.. +.|+|++|
T Consensus         1 IlvlG~-G~vG~~~~~~L~~~~~~~~v~va~r~~~~~~~~~~~~~~~~~~~~~~d~~~~---~~-l~~~~~-~~dvVin~   74 (386)
T PF03435_consen    1 ILVLGA-GRVGSAIARLLARRGPFEEVTVADRNPEKAERLAEKLLGDRVEAVQVDVNDP---ES-LAELLR-GCDVVINC   74 (386)
T ss_dssp             EEEE---SHHHHHHHHHHHCTTCE-EEEEEESSHHHHHHHHT--TTTTEEEEE--TTTH---HH-HHHHHT-TSSEEEE-
T ss_pred             CEEEcC-cHHHHHHHHHHhcCCCCCcEEEEECCHHHHHHHHhhccccceeEEEEecCCH---HH-HHHHHh-cCCEEEEC
Confidence            789998 999999999887665 4 8999999999988776342 221   23444432   22 444433 36999999


Q ss_pred             CCch-hHHHHHHhhccCCEEEEE
Q 028523           96 VGGK-MLDAVLLNMRIQGRITLC  117 (208)
Q Consensus        96 ~g~~-~~~~~~~~l~~~G~~v~~  117 (208)
                      +|.. ....+..|+..|-+++..
T Consensus        75 ~gp~~~~~v~~~~i~~g~~yvD~   97 (386)
T PF03435_consen   75 AGPFFGEPVARACIEAGVHYVDT   97 (386)
T ss_dssp             SSGGGHHHHHHHHHHHT-EEEES
T ss_pred             CccchhHHHHHHHHHhCCCeecc
Confidence            9964 444555566778888883

Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A.

>PRK03369 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=97.34  E-value=0.0013  Score=54.06  Aligned_cols=73  Identities=16%  Similarity=0.131  Sum_probs=53.5

Q ss_pred             CCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHHHHhHCCCCccEEEe
Q 028523           15 SPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFE   94 (208)
Q Consensus        15 ~~~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~d~v~d   94 (208)
                      .+..|++|+|+|. |.+|++++++++..|++|++++.++.+.+.++ +.|.. ++...   ...+.+.     .+|+|+.
T Consensus         8 ~~~~~~~v~V~G~-G~sG~aa~~~L~~~G~~v~~~D~~~~~~~~l~-~~g~~-~~~~~---~~~~~l~-----~~D~VV~   76 (488)
T PRK03369          8 PLLPGAPVLVAGA-GVTGRAVLAALTRFGARPTVCDDDPDALRPHA-ERGVA-TVSTS---DAVQQIA-----DYALVVT   76 (488)
T ss_pred             cccCCCeEEEEcC-CHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHH-hCCCE-EEcCc---chHhHhh-----cCCEEEE
Confidence            4567899999995 99999999999999999999997766666666 67763 32221   1122222     3799999


Q ss_pred             CCCc
Q 028523           95 NVGG   98 (208)
Q Consensus        95 ~~g~   98 (208)
                      +.|-
T Consensus        77 SpGi   80 (488)
T PRK03369         77 SPGF   80 (488)
T ss_pred             CCCC
Confidence            8883

>COG2519 GCD14 tRNA(1-methyladenosine) methyltransferase and related methyltransferases [Translation, ribosomal structure and biogenesis]

Probab=97.34  E-value=0.0056  Score=45.13  Aligned_cols=102  Identities=18%  Similarity=0.259  Sum_probs=71.9

Q ss_pred             HhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC--EEEEEeCCHHHHHHHHHh---cCCCeeEecCCCccHHHHHHhHCC
Q 028523           12 EVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGC--YVVGSAGSKDKVDLLKNK---FGFDEAFNYKEEPDLDAALKRYFP   86 (208)
Q Consensus        12 ~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g~--~v~~~~~s~~~~~~~~~~---~g~~~v~~~~~~~~~~~~~~~~~~   86 (208)
                      ..+++.+|++|+=.|  .|.|.+++-|++..|.  +|+.....++..+.+++.   +|....+..... |..+.+.   .
T Consensus        88 ~~~gi~pg~rVlEAG--tGSG~lt~~La~~vg~~G~v~tyE~r~d~~k~A~~Nl~~~~l~d~v~~~~~-Dv~~~~~---~  161 (256)
T COG2519          88 ARLGISPGSRVLEAG--TGSGALTAYLARAVGPEGHVTTYEIREDFAKTARENLSEFGLGDRVTLKLG-DVREGID---E  161 (256)
T ss_pred             HHcCCCCCCEEEEcc--cCchHHHHHHHHhhCCCceEEEEEecHHHHHHHHHHHHHhccccceEEEec-ccccccc---c
Confidence            457899999987766  5679999999998875  999999999988877653   344332222222 3222211   1


Q ss_pred             CCccEEEeCCCc--hhHHHHHHhhccCCEEEEEec
Q 028523           87 EGINIYFENVGG--KMLDAVLLNMRIQGRITLCGM  119 (208)
Q Consensus        87 ~~~d~v~d~~g~--~~~~~~~~~l~~~G~~v~~g~  119 (208)
                      ..+|.+|--...  ..++.+.+.|++||+++.+..
T Consensus       162 ~~vDav~LDmp~PW~~le~~~~~Lkpgg~~~~y~P  196 (256)
T COG2519         162 EDVDAVFLDLPDPWNVLEHVSDALKPGGVVVVYSP  196 (256)
T ss_pred             cccCEEEEcCCChHHHHHHHHHHhCCCcEEEEEcC
Confidence            168988755553  588999999999999998743

>PRK08219 short chain dehydrogenase; Provisional

Probab=97.32  E-value=0.004  Score=45.47  Aligned_cols=76  Identities=12%  Similarity=0.215  Sum_probs=49.1

Q ss_pred             CEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCee--EecCCCccHHHHHHhHCCCCccEEEeCCC
Q 028523           20 EYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEA--FNYKEEPDLDAALKRYFPEGINIYFENVG   97 (208)
Q Consensus        20 ~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~v--~~~~~~~~~~~~~~~~~~~~~d~v~d~~g   97 (208)
                      .+++|+||+|.+|...+..+... .+|++++++.++.+.+.+......+  .|..+...+.+.+...  +++|.+|.+.|
T Consensus         4 ~~vlVtG~~g~iG~~l~~~l~~~-~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~--~~id~vi~~ag   80 (227)
T PRK08219          4 PTALITGASRGIGAAIARELAPT-HTLLLGGRPAERLDELAAELPGATPFPVDLTDPEAIAAAVEQL--GRLDVLVHNAG   80 (227)
T ss_pred             CEEEEecCCcHHHHHHHHHHHhh-CCEEEEeCCHHHHHHHHHHhccceEEecCCCCHHHHHHHHHhc--CCCCEEEECCC
Confidence            57999999999999988777666 8999999998776665523321122  2333221222222211  26999999887


Q ss_pred             c
Q 028523           98 G   98 (208)
Q Consensus        98 ~   98 (208)
                      .
T Consensus        81 ~   81 (227)
T PRK08219         81 V   81 (227)
T ss_pred             c
Confidence            3

>PRK07578 short chain dehydrogenase; Provisional

Probab=97.32  E-value=0.0037  Score=44.82  Aligned_cols=87  Identities=17%  Similarity=0.185  Sum_probs=54.9

Q ss_pred             EEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHHHHhHCCCCccEEEeCCCc-h
Q 028523           21 YVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVGG-K   99 (208)
Q Consensus        21 ~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~d~v~d~~g~-~   99 (208)
                      +++|+||++++|...++.+... .+|+.+++++.           ...+|..+.+.+...+.+.  +++|+++.+.|. .
T Consensus         2 ~vlItGas~giG~~la~~l~~~-~~vi~~~r~~~-----------~~~~D~~~~~~~~~~~~~~--~~id~lv~~ag~~~   67 (199)
T PRK07578          2 KILVIGASGTIGRAVVAELSKR-HEVITAGRSSG-----------DVQVDITDPASIRALFEKV--GKVDAVVSAAGKVH   67 (199)
T ss_pred             eEEEEcCCcHHHHHHHHHHHhc-CcEEEEecCCC-----------ceEecCCChHHHHHHHHhc--CCCCEEEECCCCCC
Confidence            5899999999999887766655 89999887643           1123444431333333322  368888888762 1


Q ss_pred             -------------------------hHHHHHHhhccCCEEEEEeccc
Q 028523          100 -------------------------MLDAVLLNMRIQGRITLCGMIS  121 (208)
Q Consensus       100 -------------------------~~~~~~~~l~~~G~~v~~g~~~  121 (208)
                                               ..+.+.+.+.++|+++.++...
T Consensus        68 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~iss~~  114 (199)
T PRK07578         68 FAPLAEMTDEDFNVGLQSKLMGQVNLVLIGQHYLNDGGSFTLTSGIL  114 (199)
T ss_pred             CCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCeEEEEcccc
Confidence                                     0223344556778888887644

>PRK12549 shikimate 5-dehydrogenase; Reviewed

Probab=97.31  E-value=0.0056  Score=46.65  Aligned_cols=72  Identities=19%  Similarity=0.120  Sum_probs=50.6

Q ss_pred             CCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHhcCC----CeeEecCCCccHHHHHHhHCCCCccE
Q 028523           17 KQGEYVFVSAASGAVGQLVGQFAKLVGC-YVVGSAGSKDKVDLLKNKFGF----DEAFNYKEEPDLDAALKRYFPEGINI   91 (208)
Q Consensus        17 ~~g~~vli~ga~g~vG~~a~qla~~~g~-~v~~~~~s~~~~~~~~~~~g~----~~v~~~~~~~~~~~~~~~~~~~~~d~   91 (208)
                      ..+.+++|.|+ |++|.+++..+...|+ +|+++.++.++.+.+.+.++.    ..+....   +..+.+     ..+|+
T Consensus       125 ~~~k~vlIlGa-GGaaraia~aL~~~G~~~I~I~nR~~~ka~~la~~l~~~~~~~~~~~~~---~~~~~~-----~~aDi  195 (284)
T PRK12549        125 ASLERVVQLGA-GGAGAAVAHALLTLGVERLTIFDVDPARAAALADELNARFPAARATAGS---DLAAAL-----AAADG  195 (284)
T ss_pred             ccCCEEEEECC-cHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHhhCCCeEEEecc---chHhhh-----CCCCE
Confidence            35678999995 9999999999999998 899999998887776545432    1222211   222212     14899


Q ss_pred             EEeCCC
Q 028523           92 YFENVG   97 (208)
Q Consensus        92 v~d~~g   97 (208)
                      ||+|+.
T Consensus       196 VInaTp  201 (284)
T PRK12549        196 LVHATP  201 (284)
T ss_pred             EEECCc
Confidence            999965

>TIGR02469 CbiT precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit

Probab=97.30  E-value=0.0093  Score=39.05  Aligned_cols=99  Identities=22%  Similarity=0.302  Sum_probs=65.8

Q ss_pred             HhcCCCCCCEEEEecCCchHHHHHHHHHHHcC-CEEEEEeCCHHHHHHHHH---hcCCCe--eEecCCCccHHHHHHhHC
Q 028523           12 EVCSPKQGEYVFVSAASGAVGQLVGQFAKLVG-CYVVGSAGSKDKVDLLKN---KFGFDE--AFNYKEEPDLDAALKRYF   85 (208)
Q Consensus        12 ~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g-~~v~~~~~s~~~~~~~~~---~~g~~~--v~~~~~~~~~~~~~~~~~   85 (208)
                      ....+.++++++-.|.  |.|..+..+++..+ .+|++++.++...+.+++   .++...  ++..    +....... .
T Consensus        13 ~~~~~~~~~~vldlG~--G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~----~~~~~~~~-~   85 (124)
T TIGR02469        13 SKLRLRPGDVLWDIGA--GSGSITIEAARLVPNGRVYAIERNPEALRLIERNARRFGVSNIVIVEG----DAPEALED-S   85 (124)
T ss_pred             HHcCCCCCCEEEEeCC--CCCHHHHHHHHHCCCceEEEEcCCHHHHHHHHHHHHHhCCCceEEEec----cccccChh-h
Confidence            4456777889998884  44999999998875 599999999887776653   344332  2221    11110111 1


Q ss_pred             CCCccEEEeCCCc----hhHHHHHHhhccCCEEEEE
Q 028523           86 PEGINIYFENVGG----KMLDAVLLNMRIQGRITLC  117 (208)
Q Consensus        86 ~~~~d~v~d~~g~----~~~~~~~~~l~~~G~~v~~  117 (208)
                      .+.+|+|+...+.    ..+..+.+.|+++|.++..
T Consensus        86 ~~~~D~v~~~~~~~~~~~~l~~~~~~Lk~gG~li~~  121 (124)
T TIGR02469        86 LPEPDRVFIGGSGGLLQEILEAIWRRLRPGGRIVLN  121 (124)
T ss_pred             cCCCCEEEECCcchhHHHHHHHHHHHcCCCCEEEEE
Confidence            2369999976542    2678899999999998864

This model recognizes the CbiT methylase which is responsible, in part (along with CbiE), for methylating precorrin-6y (or cobalt-precorrin-6y) at both the 5 and 15 positions as well as the concomitant decarbozylation at C-12. In many organisms, this protein is fused to the CbiE subunit. The fused protein, when found in organisms catalyzing the oxidative version of the cobalamin biosynthesis pathway, is called CobL.

>TIGR02685 pter_reduc_Leis pteridine reductase

Probab=97.30  E-value=0.0025  Score=47.99  Aligned_cols=78  Identities=14%  Similarity=0.138  Sum_probs=48.7

Q ss_pred             CEEEEecCCchHHHHHHHHHHHcCCEEEEEeCC-HHHHHHHHHhcC----CCe---eEecCCCccHH----HHHHhHCC-
Q 028523           20 EYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGS-KDKVDLLKNKFG----FDE---AFNYKEEPDLD----AALKRYFP-   86 (208)
Q Consensus        20 ~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s-~~~~~~~~~~~g----~~~---v~~~~~~~~~~----~~~~~~~~-   86 (208)
                      .+++|+||++++|...++.+...|++|++++++ +++.+.+.+++.    ...   ..|..+.+.+.    +.+.+... 
T Consensus         2 ~~~lITGas~gIG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~~~~~~~~~~~~~~~~   81 (267)
T TIGR02685         2 PAAVVTGAAKRIGSSIAVALHQEGYRVVLHYHRSAAAASTLAAELNARRPNSAVTCQADLSNSATLFSRCEAIIDACFRA   81 (267)
T ss_pred             CEEEEeCCCCcHHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHHHhccCCceEEEEccCCCchhhHHHHHHHHHHHHHc
Confidence            468999999999999999988899999988654 444443332332    111   23444431221    12222211 


Q ss_pred             -CCccEEEeCCC
Q 028523           87 -EGINIYFENVG   97 (208)
Q Consensus        87 -~~~d~v~d~~g   97 (208)
                       +++|+++.+.|
T Consensus        82 ~g~iD~lv~nAG   93 (267)
T TIGR02685        82 FGRCDVLVNNAS   93 (267)
T ss_pred             cCCceEEEECCc
Confidence             36999999887

Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family.

>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA

Probab=97.30  E-value=0.0021  Score=47.34  Aligned_cols=70  Identities=19%  Similarity=0.300  Sum_probs=50.0

Q ss_pred             EEEecCCchHHHHHHHHHHHcCCEEEEEeCCHH--HHHHHHHhcCCCee-EecCCCccHHHHHHhHCCCCccEEEeCCC
Q 028523           22 VFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKD--KVDLLKNKFGFDEA-FNYKEEPDLDAALKRYFPEGINIYFENVG   97 (208)
Q Consensus        22 vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~--~~~~~~~~~g~~~v-~~~~~~~~~~~~~~~~~~~~~d~v~d~~g   97 (208)
                      |+|+||+|.+|...++.+...+.+|.+.+|+..  ..+.++ ..|+..+ .|+.+.    +.+.+... |+|.||.+++
T Consensus         1 I~V~GatG~~G~~v~~~L~~~~~~V~~l~R~~~~~~~~~l~-~~g~~vv~~d~~~~----~~l~~al~-g~d~v~~~~~   73 (233)
T PF05368_consen    1 ILVTGATGNQGRSVVRALLSAGFSVRALVRDPSSDRAQQLQ-ALGAEVVEADYDDP----ESLVAALK-GVDAVFSVTP   73 (233)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTGCEEEEESSSHHHHHHHHH-HTTTEEEES-TT-H----HHHHHHHT-TCSEEEEESS
T ss_pred             CEEECCccHHHHHHHHHHHhCCCCcEEEEeccchhhhhhhh-cccceEeecccCCH----HHHHHHHc-CCceEEeecC
Confidence            789999999999999999888889999998864  345566 6787533 333332    22222222 6999999888

NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....

>cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase

Probab=97.29  E-value=0.0042  Score=42.66  Aligned_cols=94  Identities=18%  Similarity=0.173  Sum_probs=61.5

Q ss_pred             CCCCEEEEecCCchHHHHHHHHHHHcC-CEEEEEeCCHHHHHHHHHhcCCCe-eEecCCCccHHHHHHhHCCCCccEEEe
Q 028523           17 KQGEYVFVSAASGAVGQLVGQFAKLVG-CYVVGSAGSKDKVDLLKNKFGFDE-AFNYKEEPDLDAALKRYFPEGINIYFE   94 (208)
Q Consensus        17 ~~g~~vli~ga~g~vG~~a~qla~~~g-~~v~~~~~s~~~~~~~~~~~g~~~-v~~~~~~~~~~~~~~~~~~~~~d~v~d   94 (208)
                      .++.+++|.|+ |++|...++.+...| .+|++.++++++.+.+.++++... .....   +..+.     -.++|+|+.
T Consensus        17 ~~~~~i~iiG~-G~~g~~~a~~l~~~g~~~v~v~~r~~~~~~~~~~~~~~~~~~~~~~---~~~~~-----~~~~Dvvi~   87 (155)
T cd01065          17 LKGKKVLILGA-GGAARAVAYALAELGAAKIVIVNRTLEKAKALAERFGELGIAIAYL---DLEEL-----LAEADLIIN   87 (155)
T ss_pred             CCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhhcccceeec---chhhc-----cccCCEEEe
Confidence            45788999996 999999998888886 589999999888776554666421 11111   22221     125899999


Q ss_pred             CCCchhH-----HHHHHhhccCCEEEEEec
Q 028523           95 NVGGKML-----DAVLLNMRIQGRITLCGM  119 (208)
Q Consensus        95 ~~g~~~~-----~~~~~~l~~~G~~v~~g~  119 (208)
                      |++....     ......++++..++.++.
T Consensus        88 ~~~~~~~~~~~~~~~~~~~~~~~~v~D~~~  117 (155)
T cd01065          88 TTPVGMKPGDELPLPPSLLKPGGVVYDVVY  117 (155)
T ss_pred             CcCCCCCCCCCCCCCHHHcCCCCEEEEcCc
Confidence            9885432     112234667777776654

Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann

>PRK12935 acetoacetyl-CoA reductase; Provisional

Probab=97.28  E-value=0.002  Score=47.79  Aligned_cols=81  Identities=21%  Similarity=0.263  Sum_probs=49.8

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeC-CHHHHHHHHHh---cCCCe-e--EecCCCccHHHHHHhHCC--CC
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAG-SKDKVDLLKNK---FGFDE-A--FNYKEEPDLDAALKRYFP--EG   88 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~-s~~~~~~~~~~---~g~~~-v--~~~~~~~~~~~~~~~~~~--~~   88 (208)
                      .+.+++|+||+|++|...++.+...|++|+++.+ +++..+...+.   .+... .  +|..+.+.+.+.+.+...  +.
T Consensus         5 ~~~~~lItG~s~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   84 (247)
T PRK12935          5 NGKVAIVTGGAKGIGKAITVALAQEGAKVVINYNSSKEAAENLVNELGKEGHDVYAVQADVSKVEDANRLVEEAVNHFGK   84 (247)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEcCCcHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            4789999999999999999888888999887654 34443332212   23221 1  233333223333333322  25


Q ss_pred             ccEEEeCCCc
Q 028523           89 INIYFENVGG   98 (208)
Q Consensus        89 ~d~v~d~~g~   98 (208)
                      +|.+|.+.|.
T Consensus        85 id~vi~~ag~   94 (247)
T PRK12935         85 VDILVNNAGI   94 (247)
T ss_pred             CCEEEECCCC
Confidence            8999998873

>PRK12548 shikimate 5-dehydrogenase; Provisional

Probab=97.28  E-value=0.0028  Score=48.46  Aligned_cols=46  Identities=15%  Similarity=0.156  Sum_probs=35.1

Q ss_pred             CCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCH---HHHHHHHHhc
Q 028523           17 KQGEYVFVSAASGAVGQLVGQFAKLVGC-YVVGSAGSK---DKVDLLKNKF   63 (208)
Q Consensus        17 ~~g~~vli~ga~g~vG~~a~qla~~~g~-~v~~~~~s~---~~~~~~~~~~   63 (208)
                      .++.+++|+|+ ||+|.+++..+...|+ +|+++.|+.   ++.+.+.+++
T Consensus       124 ~~~k~vlI~GA-GGagrAia~~La~~G~~~V~I~~R~~~~~~~a~~l~~~l  173 (289)
T PRK12548        124 VKGKKLTVIGA-GGAATAIQVQCALDGAKEITIFNIKDDFYERAEQTAEKI  173 (289)
T ss_pred             cCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCchHHHHHHHHHHHH
Confidence            35788999997 8999998888888999 599999885   4444443244

>TIGR00507 aroE shikimate 5-dehydrogenase

Probab=97.28  E-value=0.0058  Score=46.26  Aligned_cols=101  Identities=14%  Similarity=0.172  Sum_probs=62.8

Q ss_pred             HHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCC---CeeEecCCCccHHHHHHhH
Q 028523            8 AGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGF---DEAFNYKEEPDLDAALKRY   84 (208)
Q Consensus         8 ~~l~~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~---~~v~~~~~~~~~~~~~~~~   84 (208)
                      .+|.+.....++.+++|+|+ |++|.+.+..+...|.+|+++.+++++.+.+.+.++.   ...+.      ..+    .
T Consensus       106 ~~l~~~~~~~~~k~vliiGa-Gg~g~aia~~L~~~g~~v~v~~R~~~~~~~la~~~~~~~~~~~~~------~~~----~  174 (270)
T TIGR00507       106 SDLERLIPLRPNQRVLIIGA-GGAARAVALPLLKADCNVIIANRTVSKAEELAERFQRYGEIQAFS------MDE----L  174 (270)
T ss_pred             HHHHhcCCCccCCEEEEEcC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhhcCceEEec------hhh----h
Confidence            34433233355789999996 8999999888888899999999998876665534432   11211      111    1


Q ss_pred             CCCCccEEEeCCCchh---HH---HHHHhhccCCEEEEEec
Q 028523           85 FPEGINIYFENVGGKM---LD---AVLLNMRIQGRITLCGM  119 (208)
Q Consensus        85 ~~~~~d~v~d~~g~~~---~~---~~~~~l~~~G~~v~~g~  119 (208)
                      ....+|+||+|++...   ..   .....++++..++.+..
T Consensus       175 ~~~~~DivInatp~gm~~~~~~~~~~~~~l~~~~~v~D~~y  215 (270)
T TIGR00507       175 PLHRVDLIINATSAGMSGNIDEPPVPAEKLKEGMVVYDMVY  215 (270)
T ss_pred             cccCccEEEECCCCCCCCCCCCCCCCHHHcCCCCEEEEecc
Confidence            1125899999988421   11   12345677766666643

This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain.

>PRK00811 spermidine synthase; Provisional

Probab=97.28  E-value=0.0045  Score=47.18  Aligned_cols=98  Identities=7%  Similarity=0.033  Sum_probs=63.5

Q ss_pred             CCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHhcC-----C--CeeEecCCCccHHHHHHhHCCCC
Q 028523           17 KQGEYVFVSAASGAVGQLVGQFAKLVGC-YVVGSAGSKDKVDLLKNKFG-----F--DEAFNYKEEPDLDAALKRYFPEG   88 (208)
Q Consensus        17 ~~g~~vli~ga~g~vG~~a~qla~~~g~-~v~~~~~s~~~~~~~~~~~g-----~--~~v~~~~~~~~~~~~~~~~~~~~   88 (208)
                      +..++||+.|+  |.|..+..++++.+. +|.++..+++-.+.+++.+.     .  +.-+..... +..+.+.. ..+.
T Consensus        75 ~~p~~VL~iG~--G~G~~~~~~l~~~~~~~V~~VEid~~vv~~a~~~~~~~~~~~~~d~rv~v~~~-Da~~~l~~-~~~~  150 (283)
T PRK00811         75 PNPKRVLIIGG--GDGGTLREVLKHPSVEKITLVEIDERVVEVCRKYLPEIAGGAYDDPRVELVIG-DGIKFVAE-TENS  150 (283)
T ss_pred             CCCCEEEEEec--CchHHHHHHHcCCCCCEEEEEeCCHHHHHHHHHHhHHhccccccCCceEEEEC-chHHHHhh-CCCc
Confidence            46789999995  457777788887665 89999999988777774332     1  111111112 44444443 3447


Q ss_pred             ccEEEeCCC-----------chhHHHHHHhhccCCEEEEEe
Q 028523           89 INIYFENVG-----------GKMLDAVLLNMRIQGRITLCG  118 (208)
Q Consensus        89 ~d~v~d~~g-----------~~~~~~~~~~l~~~G~~v~~g  118 (208)
                      +|+|+--..           .+.+..+.+.|+++|.++.-.
T Consensus       151 yDvIi~D~~dp~~~~~~l~t~ef~~~~~~~L~~gGvlv~~~  191 (283)
T PRK00811        151 FDVIIVDSTDPVGPAEGLFTKEFYENCKRALKEDGIFVAQS  191 (283)
T ss_pred             ccEEEECCCCCCCchhhhhHHHHHHHHHHhcCCCcEEEEeC
Confidence            999986431           123567889999999988743

>PRK13243 glyoxylate reductase; Reviewed

Probab=97.26  E-value=0.0097  Score=46.46  Aligned_cols=89  Identities=19%  Similarity=0.204  Sum_probs=64.5

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHHHHhHCCCCccEEEeCCC
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVG   97 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~d~v~d~~g   97 (208)
                      .|.+|.|+| .|.+|...++.++..|.+|++.+++.+.. ... .+|..    +.   ++.+.+.+     .|+|+.++.
T Consensus       149 ~gktvgIiG-~G~IG~~vA~~l~~~G~~V~~~d~~~~~~-~~~-~~~~~----~~---~l~ell~~-----aDiV~l~lP  213 (333)
T PRK13243        149 YGKTIGIIG-FGRIGQAVARRAKGFGMRILYYSRTRKPE-AEK-ELGAE----YR---PLEELLRE-----SDFVSLHVP  213 (333)
T ss_pred             CCCEEEEEC-cCHHHHHHHHHHHHCCCEEEEECCCCChh-hHH-HcCCE----ec---CHHHHHhh-----CCEEEEeCC
Confidence            678999999 59999999999999999999998775443 233 44431    11   34444433     799999887


Q ss_pred             -ch-----hHHHHHHhhccCCEEEEEeccc
Q 028523           98 -GK-----MLDAVLLNMRIQGRITLCGMIS  121 (208)
Q Consensus        98 -~~-----~~~~~~~~l~~~G~~v~~g~~~  121 (208)
                       .+     .-...+..|+++..++.++...
T Consensus       214 ~t~~T~~~i~~~~~~~mk~ga~lIN~aRg~  243 (333)
T PRK13243        214 LTKETYHMINEERLKLMKPTAILVNTARGK  243 (333)
T ss_pred             CChHHhhccCHHHHhcCCCCeEEEECcCch
Confidence             33     1246788999999999887643

>TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase

Probab=97.26  E-value=0.0033  Score=49.32  Aligned_cols=76  Identities=21%  Similarity=0.255  Sum_probs=50.2

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCC--C-e--eEecCCCccHHHHHHhHCCC-CccE
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGF--D-E--AFNYKEEPDLDAALKRYFPE-GINI   91 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~--~-~--v~~~~~~~~~~~~~~~~~~~-~~d~   91 (208)
                      +|.+|||+||+|.+|..+++.+...|.+|+++++++.......+.++.  . .  ..|..+.    +.+.+...+ ++|+
T Consensus         3 ~~k~ilItGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~----~~~~~~~~~~~~d~   78 (349)
T TIGR02622         3 QGKKVLVTGHTGFKGSWLSLWLLELGAEVYGYSLDPPTSPNLFELLNLAKKIEDHFGDIRDA----AKLRKAIAEFKPEI   78 (349)
T ss_pred             CCCEEEEECCCChhHHHHHHHHHHCCCEEEEEeCCCccchhHHHHHhhcCCceEEEccCCCH----HHHHHHHhhcCCCE
Confidence            478999999999999999999988999999998776543322112221  1 1  2233332    223333333 5899


Q ss_pred             EEeCCC
Q 028523           92 YFENVG   97 (208)
Q Consensus        92 v~d~~g   97 (208)
                      ||.+.+
T Consensus        79 vih~A~   84 (349)
T TIGR02622        79 VFHLAA   84 (349)
T ss_pred             EEECCc
Confidence            999887

Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose.

>PRK05447 1-deoxy-D-xylulose 5-phosphate reductoisomerase; Provisional

Probab=97.26  E-value=0.0082  Score=47.32  Aligned_cols=95  Identities=17%  Similarity=0.155  Sum_probs=64.2

Q ss_pred             CEEEEecCCchHHHHHHHHHHHc--CCEEEEEe--CCHHHHHHHHHhcCCCeeEecCCCccHHHHHH-------------
Q 028523           20 EYVFVSAASGAVGQLVGQFAKLV--GCYVVGSA--GSKDKVDLLKNKFGFDEAFNYKEEPDLDAALK-------------   82 (208)
Q Consensus        20 ~~vli~ga~g~vG~~a~qla~~~--g~~v~~~~--~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~-------------   82 (208)
                      .+|.|.|++|++|..+++..+..  .++|++.+  ++.+++....++|++..++-.++.  ....++             
T Consensus         2 k~VaILGsTGSIG~~tL~vi~~~p~~f~VvaLaa~~n~~~l~~q~~~f~p~~v~i~~~~--~~~~l~~~l~~~~~~v~~G   79 (385)
T PRK05447          2 KRITILGSTGSIGTQTLDVIRRNPDRFRVVALSAGKNVELLAEQAREFRPKYVVVADEE--AAKELKEALAAAGIEVLAG   79 (385)
T ss_pred             ceEEEEcCChHHHHHHHHHHHhCccccEEEEEEcCCCHHHHHHHHHHhCCCEEEEcCHH--HHHHHHHhhccCCceEEEC
Confidence            47899999999999999998765  46887775  444455544448888765443331  111222             


Q ss_pred             -----hHCCC-CccEEEeCCCc-hhHHHHHHhhccCCEEEE
Q 028523           83 -----RYFPE-GINIYFENVGG-KMLDAVLLNMRIQGRITL  116 (208)
Q Consensus        83 -----~~~~~-~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~  116 (208)
                           ++... .+|+|+.++++ ..+...+..++.|-++.+
T Consensus        80 ~~~~~~l~~~~~vD~Vv~Ai~G~aGl~ptl~Ai~aGK~VaL  120 (385)
T PRK05447         80 EEGLCELAALPEADVVVAAIVGAAGLLPTLAAIRAGKRIAL  120 (385)
T ss_pred             hhHHHHHhcCCCCCEEEEeCcCcccHHHHHHHHHCCCcEEE
Confidence                 22222 58999998886 567788888888777655

>PRK06947 glucose-1-dehydrogenase; Provisional

Probab=97.26  E-value=0.0018  Score=48.03  Aligned_cols=78  Identities=18%  Similarity=0.170  Sum_probs=48.3

Q ss_pred             CEEEEecCCchHHHHHHHHHHHcCCEEEEEe-CCHHHHHHHHH---hcCCCe---eEecCCCccHHHHHHhHCC--CCcc
Q 028523           20 EYVFVSAASGAVGQLVGQFAKLVGCYVVGSA-GSKDKVDLLKN---KFGFDE---AFNYKEEPDLDAALKRYFP--EGIN   90 (208)
Q Consensus        20 ~~vli~ga~g~vG~~a~qla~~~g~~v~~~~-~s~~~~~~~~~---~~g~~~---v~~~~~~~~~~~~~~~~~~--~~~d   90 (208)
                      .+++|+||+|++|...++.+...|++|+++. +++++.+.+.+   ..+...   ..|..+..++.+.+.+...  +++|
T Consensus         3 k~ilItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id   82 (248)
T PRK06947          3 KVVLITGASRGIGRATAVLAAARGWSVGINYARDAAAAEETADAVRAAGGRACVVAGDVANEADVIAMFDAVQSAFGRLD   82 (248)
T ss_pred             cEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEeccCCHHHHHHHHHHHHHhcCCCC
Confidence            4799999999999999998888899987765 44444333221   223221   2343333233333333321  3699


Q ss_pred             EEEeCCC
Q 028523           91 IYFENVG   97 (208)
Q Consensus        91 ~v~d~~g   97 (208)
                      ++|.+.|
T Consensus        83 ~li~~ag   89 (248)
T PRK06947         83 ALVNNAG   89 (248)
T ss_pred             EEEECCc
Confidence            9999887

>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase

Probab=97.26  E-value=0.0041  Score=49.66  Aligned_cols=104  Identities=18%  Similarity=0.164  Sum_probs=63.5

Q ss_pred             CCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHH------HHHHhc-CCCe-eEecCCCccHHHHHHhHCCCC
Q 028523           17 KQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVD------LLKNKF-GFDE-AFNYKEEPDLDAALKRYFPEG   88 (208)
Q Consensus        17 ~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~------~~~~~~-g~~~-v~~~~~~~~~~~~~~~~~~~~   88 (208)
                      ..+.+|||+||+|.+|..+++.+...|.+|++++++..+.+      ...+.. +... ..|..+.+.+...++.. +.+
T Consensus        58 ~~~~kVLVtGatG~IG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~~~~~~~-~~~  136 (390)
T PLN02657         58 PKDVTVLVVGATGYIGKFVVRELVRRGYNVVAVAREKSGIRGKNGKEDTKKELPGAEVVFGDVTDADSLRKVLFSE-GDP  136 (390)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEEechhhccccchhhHHhhhcCCceEEEeeCCCHHHHHHHHHHh-CCC
Confidence            45779999999999999999988888999999998765421      111012 2222 24555442333333322 116


Q ss_pred             ccEEEeCCCch------h-------HHHHHHhhccC--CEEEEEeccc
Q 028523           89 INIYFENVGGK------M-------LDAVLLNMRIQ--GRITLCGMIS  121 (208)
Q Consensus        89 ~d~v~d~~g~~------~-------~~~~~~~l~~~--G~~v~~g~~~  121 (208)
                      +|+||+|.+..      .       ....++.+...  ++++.++...
T Consensus       137 ~D~Vi~~aa~~~~~~~~~~~vn~~~~~~ll~aa~~~gv~r~V~iSS~~  184 (390)
T PLN02657        137 VDVVVSCLASRTGGVKDSWKIDYQATKNSLDAGREVGAKHFVLLSAIC  184 (390)
T ss_pred             CcEEEECCccCCCCCccchhhHHHHHHHHHHHHHHcCCCEEEEEeecc
Confidence            99999987631      1       12233444332  5788887653

>PF08704 GCD14: tRNA methyltransferase complex GCD14 subunit; InterPro: IPR014816 GCD14 is a subunit of the tRNA methyltransferase complex and is required for 1-methyladenosine modification and maturation of initiator methionyl-tRNA []

Probab=97.25  E-value=0.0025  Score=47.28  Aligned_cols=107  Identities=15%  Similarity=0.233  Sum_probs=67.6

Q ss_pred             HHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC--EEEEEeCCHHHHHHHHH---hcCCCeeEecCCCccHH-HHHHh
Q 028523           10 FFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGC--YVVGSAGSKDKVDLLKN---KFGFDEAFNYKEEPDLD-AALKR   83 (208)
Q Consensus        10 l~~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g~--~v~~~~~s~~~~~~~~~---~~g~~~v~~~~~~~~~~-~~~~~   83 (208)
                      +....++.+|++|+=-|  .|.|-+..-+++..|-  +|+.....+++.+.+++   .+|....+..... |+. +.+.+
T Consensus        32 I~~~l~i~pG~~VlEaG--tGSG~lt~~l~r~v~p~G~v~t~E~~~~~~~~A~~n~~~~gl~~~v~~~~~-Dv~~~g~~~  108 (247)
T PF08704_consen   32 ILMRLDIRPGSRVLEAG--TGSGSLTHALARAVGPTGHVYTYEFREDRAEKARKNFERHGLDDNVTVHHR-DVCEEGFDE  108 (247)
T ss_dssp             HHHHTT--TT-EEEEE----TTSHHHHHHHHHHTTTSEEEEEESSHHHHHHHHHHHHHTTCCTTEEEEES--GGCG--ST
T ss_pred             HHHHcCCCCCCEEEEec--CCcHHHHHHHHHHhCCCeEEEccccCHHHHHHHHHHHHHcCCCCCceeEec-ceecccccc
Confidence            33557899999987766  5678888889988874  99999999998877765   3455432222112 221 12211


Q ss_pred             HCCCCccEEEeCCCc--hhHHHHHHhh-ccCCEEEEEec
Q 028523           84 YFPEGINIYFENVGG--KMLDAVLLNM-RIQGRITLCGM  119 (208)
Q Consensus        84 ~~~~~~d~v~d~~g~--~~~~~~~~~l-~~~G~~v~~g~  119 (208)
                      -....+|.||-=...  ..+..+.+.| ++||+++.+..
T Consensus       109 ~~~~~~DavfLDlp~Pw~~i~~~~~~L~~~gG~i~~fsP  147 (247)
T PF08704_consen  109 ELESDFDAVFLDLPDPWEAIPHAKRALKKPGGRICCFSP  147 (247)
T ss_dssp             T-TTSEEEEEEESSSGGGGHHHHHHHE-EEEEEEEEEES
T ss_pred             cccCcccEEEEeCCCHHHHHHHHHHHHhcCCceEEEECC
Confidence            112368988765553  5899999999 89999988843

; GO: 0016429 tRNA (adenine-N1-)-methyltransferase activity, 0030488 tRNA methylation; PDB: 2YVL_C 1YB2_A 2B25_B 1O54_A 2PWY_B 1I9G_A 3LGA_B 3LHD_C 3MB5_A.

>TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family

Probab=97.25  E-value=0.0022  Score=48.74  Aligned_cols=95  Identities=12%  Similarity=0.133  Sum_probs=61.0

Q ss_pred             EEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCe-eEecCCCccHHHHHHhHCC-CC-ccEEEeCCC
Q 028523           21 YVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDE-AFNYKEEPDLDAALKRYFP-EG-INIYFENVG   97 (208)
Q Consensus        21 ~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~-v~~~~~~~~~~~~~~~~~~-~~-~d~v~d~~g   97 (208)
                      +|+|+||+|.+|..+++.+...|.+|.+.+|++++..    ..+... ..|+.+.+.+...++.... .+ +|.+|.+.+
T Consensus         1 ~ilVtGatG~iG~~vv~~L~~~g~~V~~~~R~~~~~~----~~~~~~~~~d~~d~~~l~~a~~~~~~~~g~~d~v~~~~~   76 (285)
T TIGR03649         1 TILLTGGTGKTASRIARLLQAASVPFLVASRSSSSSA----GPNEKHVKFDWLDEDTWDNPFSSDDGMEPEISAVYLVAP   76 (285)
T ss_pred             CEEEEcCCChHHHHHHHHHHhCCCcEEEEeCCCcccc----CCCCccccccCCCHHHHHHHHhcccCcCCceeEEEEeCC
Confidence            4899999999999999988888999999999876532    223322 3566654234444432111 25 899987766


Q ss_pred             c--h---hHHHHHHhhccCC--EEEEEec
Q 028523           98 G--K---MLDAVLLNMRIQG--RITLCGM  119 (208)
Q Consensus        98 ~--~---~~~~~~~~l~~~G--~~v~~g~  119 (208)
                      .  .   .....++.++..|  ++|.++.
T Consensus        77 ~~~~~~~~~~~~i~aa~~~gv~~~V~~Ss  105 (285)
T TIGR03649        77 PIPDLAPPMIKFIDFARSKGVRRFVLLSA  105 (285)
T ss_pred             CCCChhHHHHHHHHHHHHcCCCEEEEeec
Confidence            2  1   2334445454443  7877765

This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi.

>PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=97.25  E-value=0.0018  Score=49.88  Aligned_cols=80  Identities=18%  Similarity=0.191  Sum_probs=49.4

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCH-HHHHHHHH---hcCCCe---eEecCCCccHHHHHHhHC-CCCc
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSK-DKVDLLKN---KFGFDE---AFNYKEEPDLDAALKRYF-PEGI   89 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~-~~~~~~~~---~~g~~~---v~~~~~~~~~~~~~~~~~-~~~~   89 (208)
                      +|.+++|+||++++|...++.+...|++|++.+++. +..+.+.+   ..|...   ..|..+.+...+.+.... -+++
T Consensus        11 ~~k~~lVTGas~gIG~~ia~~L~~~Ga~Vv~~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dv~d~~~~~~~~~~~~~~g~i   90 (306)
T PRK07792         11 SGKVAVVTGAAAGLGRAEALGLARLGATVVVNDVASALDASDVLDEIRAAGAKAVAVAGDISQRATADELVATAVGLGGL   90 (306)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCchhHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHHhCCC
Confidence            578999999999999999988888899999887643 23322221   234322   123333212222222211 2479


Q ss_pred             cEEEeCCC
Q 028523           90 NIYFENVG   97 (208)
Q Consensus        90 d~v~d~~g   97 (208)
                      |++|++.|
T Consensus        91 D~li~nAG   98 (306)
T PRK07792         91 DIVVNNAG   98 (306)
T ss_pred             CEEEECCC
Confidence            99999887

>PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases

Probab=97.25  E-value=0.0062  Score=46.23  Aligned_cols=77  Identities=19%  Similarity=0.178  Sum_probs=46.6

Q ss_pred             EEEecCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHhcC----CCee--E--e-cCCCccHHHHHHhHCCC-Ccc
Q 028523           22 VFVSAASGAVGQLVGQFAKLVGC-YVVGSAGSKDKVDLLKNKFG----FDEA--F--N-YKEEPDLDAALKRYFPE-GIN   90 (208)
Q Consensus        22 vli~ga~g~vG~~a~qla~~~g~-~v~~~~~s~~~~~~~~~~~g----~~~v--~--~-~~~~~~~~~~~~~~~~~-~~d   90 (208)
                      |||+||+|++|...++-+...+. ++++.++++.++-.+++++.    ...+  .  . .-+- .-.+.+...... ++|
T Consensus         1 VLVTGa~GSIGseL~rql~~~~p~~lil~d~~E~~l~~l~~~l~~~~~~~~v~~~~~~vigDv-rd~~~l~~~~~~~~pd   79 (293)
T PF02719_consen    1 VLVTGAGGSIGSELVRQLLRYGPKKLILFDRDENKLYELERELRSRFPDPKVRFEIVPVIGDV-RDKERLNRIFEEYKPD   79 (293)
T ss_dssp             EEEETTTSHHHHHHHHHHHCCB-SEEEEEES-HHHHHHHHHHCHHHC--TTCEEEEE--CTSC-CHHHHHHHHTT--T-S
T ss_pred             CEEEccccHHHHHHHHHHHhcCCCeEEEeCCChhHHHHHHHHHhhcccccCcccccCceeecc-cCHHHHHHHHhhcCCC
Confidence            79999999999998877777776 89999999888777766662    1111  0  0 1111 223455555554 899


Q ss_pred             EEEeCCCch
Q 028523           91 IYFENVGGK   99 (208)
Q Consensus        91 ~v~d~~g~~   99 (208)
                      +||.++.-+
T Consensus        80 iVfHaAA~K   88 (293)
T PF02719_consen   80 IVFHAAALK   88 (293)
T ss_dssp             EEEE-----
T ss_pred             EEEEChhcC
Confidence            999988643

The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A.

>PRK12550 shikimate 5-dehydrogenase; Reviewed

Probab=97.24  E-value=0.0054  Score=46.37  Aligned_cols=76  Identities=12%  Similarity=0.048  Sum_probs=52.6

Q ss_pred             HHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHHHHhHC
Q 028523            7 YAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGC-YVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYF   85 (208)
Q Consensus         7 ~~~l~~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g~-~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~   85 (208)
                      +.+|.. .....+.+++|.|+ ||.+.+++..+...|+ +|+++.|+.++.+.+.+.++..          +...+   .
T Consensus       111 ~~~L~~-~~~~~~~~vlilGa-GGaarAi~~aL~~~g~~~i~i~nR~~~~a~~la~~~~~~----------~~~~~---~  175 (272)
T PRK12550        111 AKLLAS-YQVPPDLVVALRGS-GGMAKAVAAALRDAGFTDGTIVARNEKTGKALAELYGYE----------WRPDL---G  175 (272)
T ss_pred             HHHHHh-cCCCCCCeEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhCCc----------chhhc---c
Confidence            334433 23445678999996 9999999988888998 7999999998887776455421          11111   1


Q ss_pred             CCCccEEEeCCC
Q 028523           86 PEGINIYFENVG   97 (208)
Q Consensus        86 ~~~~d~v~d~~g   97 (208)
                      ...+|+|++|+.
T Consensus       176 ~~~~dlvINaTp  187 (272)
T PRK12550        176 GIEADILVNVTP  187 (272)
T ss_pred             cccCCEEEECCc
Confidence            124899999986

>PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=97.24  E-value=0.0023  Score=47.25  Aligned_cols=80  Identities=21%  Similarity=0.302  Sum_probs=49.2

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHH-HHHHHH---hcCCC-e--eEecCCCccHHHHHHhHCC--CC
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDK-VDLLKN---KFGFD-E--AFNYKEEPDLDAALKRYFP--EG   88 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~-~~~~~~---~~g~~-~--v~~~~~~~~~~~~~~~~~~--~~   88 (208)
                      +..++||+||+|++|..+++.+...|++|+++.++..+ .+.+.+   ..+.. .  ..|..+.+.+.+.+.+...  ++
T Consensus         5 ~~~~vlItGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~   84 (249)
T PRK12825          5 MGRVALVTGAARGLGRAIALRLARAGADVVVHYRSDEEAAEELVEAVEALGRRAQAVQADVTDKAALEAAVAAAVERFGR   84 (249)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhcCCceEEEECCcCCHHHHHHHHHHHHHHcCC
Confidence            34689999999999999999998899998776655443 222221   22321 1  2344433223333332211  36


Q ss_pred             ccEEEeCCC
Q 028523           89 INIYFENVG   97 (208)
Q Consensus        89 ~d~v~d~~g   97 (208)
                      +|.+|.+.|
T Consensus        85 id~vi~~ag   93 (249)
T PRK12825         85 IDILVNNAG   93 (249)
T ss_pred             CCEEEECCc
Confidence            899999887

>KOG1502 consensus Flavonol reductase/cinnamoyl-CoA reductase [Defense mechanisms]

Probab=97.24  E-value=0.0027  Score=48.78  Aligned_cols=74  Identities=24%  Similarity=0.389  Sum_probs=52.8

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHH---HHHHhcC-CC---eeE--ecCCCccHHHHHHhHCCCC
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVD---LLKNKFG-FD---EAF--NYKEEPDLDAALKRYFPEG   88 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~---~~~~~~g-~~---~v~--~~~~~~~~~~~~~~~~~~~   88 (208)
                      .+..|+|+||+|=||...+..+...|++|.+++|++++.+   .++ ++. +.   .++  |..+...+...+.     |
T Consensus         5 ~~~~VcVTGAsGfIgswivk~LL~rGY~V~gtVR~~~~~k~~~~L~-~l~~a~~~l~l~~aDL~d~~sf~~ai~-----g   78 (327)
T KOG1502|consen    5 EGKKVCVTGASGFIGSWIVKLLLSRGYTVRGTVRDPEDEKKTEHLR-KLEGAKERLKLFKADLLDEGSFDKAID-----G   78 (327)
T ss_pred             CCcEEEEeCCchHHHHHHHHHHHhCCCEEEEEEcCcchhhhHHHHH-hcccCcccceEEeccccccchHHHHHh-----C
Confidence            5788999999999999999999999999999999988733   455 554 22   122  2222213333332     5


Q ss_pred             ccEEEeCCC
Q 028523           89 INIYFENVG   97 (208)
Q Consensus        89 ~d~v~d~~g   97 (208)
                      +|.||.+..
T Consensus        79 cdgVfH~As   87 (327)
T KOG1502|consen   79 CDGVFHTAS   87 (327)
T ss_pred             CCEEEEeCc
Confidence            999998765

>PLN02366 spermidine synthase

Probab=97.23  E-value=0.0054  Score=47.20  Aligned_cols=100  Identities=16%  Similarity=0.091  Sum_probs=63.1

Q ss_pred             CCCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHhcCC------CeeEecCCCccHHHHHHhHCCCC
Q 028523           16 PKQGEYVFVSAASGAVGQLVGQFAKLVGC-YVVGSAGSKDKVDLLKNKFGF------DEAFNYKEEPDLDAALKRYFPEG   88 (208)
Q Consensus        16 ~~~g~~vli~ga~g~vG~~a~qla~~~g~-~v~~~~~s~~~~~~~~~~~g~------~~v~~~~~~~~~~~~~~~~~~~~   88 (208)
                      ....++||+.|+  |-|..+..++++-+. +|.++..+++-.+.+++.+..      +.-+..... +..+.+++..++.
T Consensus        89 ~~~pkrVLiIGg--G~G~~~rellk~~~v~~V~~VEiD~~Vi~~ar~~f~~~~~~~~dpRv~vi~~-Da~~~l~~~~~~~  165 (308)
T PLN02366         89 IPNPKKVLVVGG--GDGGVLREIARHSSVEQIDICEIDKMVIDVSKKFFPDLAVGFDDPRVNLHIG-DGVEFLKNAPEGT  165 (308)
T ss_pred             CCCCCeEEEEcC--CccHHHHHHHhCCCCCeEEEEECCHHHHHHHHHhhhhhccccCCCceEEEEC-hHHHHHhhccCCC
Confidence            456789999995  336677788888765 888999888767777633321      110111112 3344444332347


Q ss_pred             ccEEEeCCCc-----------hhHHHHHHhhccCCEEEEEe
Q 028523           89 INIYFENVGG-----------KMLDAVLLNMRIQGRITLCG  118 (208)
Q Consensus        89 ~d~v~d~~g~-----------~~~~~~~~~l~~~G~~v~~g  118 (208)
                      +|+||--...           +.++.+.++|+++|.++.-+
T Consensus       166 yDvIi~D~~dp~~~~~~L~t~ef~~~~~~~L~pgGvlv~q~  206 (308)
T PLN02366        166 YDAIIVDSSDPVGPAQELFEKPFFESVARALRPGGVVCTQA  206 (308)
T ss_pred             CCEEEEcCCCCCCchhhhhHHHHHHHHHHhcCCCcEEEECc
Confidence            9998763321           24778899999999997643

>COG2910 Putative NADH-flavin reductase [General function prediction only]

Probab=97.23  E-value=0.0072  Score=42.39  Aligned_cols=92  Identities=16%  Similarity=0.216  Sum_probs=61.3

Q ss_pred             EEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCC--CeeEecCCCccHHHHHHhHCCCCccEEEeCCCc
Q 028523           21 YVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGF--DEAFNYKEEPDLDAALKRYFPEGINIYFENVGG   98 (208)
Q Consensus        21 ~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~--~~v~~~~~~~~~~~~~~~~~~~~~d~v~d~~g~   98 (208)
                      .|.|+||+|-+|...++=|+..|..|++++|++.+....+ ..-.  ..+++..   ...+.   +.  |+|+||++.+.
T Consensus         2 KIaiIgAsG~~Gs~i~~EA~~RGHeVTAivRn~~K~~~~~-~~~i~q~Difd~~---~~a~~---l~--g~DaVIsA~~~   72 (211)
T COG2910           2 KIAIIGASGKAGSRILKEALKRGHEVTAIVRNASKLAARQ-GVTILQKDIFDLT---SLASD---LA--GHDAVISAFGA   72 (211)
T ss_pred             eEEEEecCchhHHHHHHHHHhCCCeeEEEEeChHhccccc-cceeecccccChh---hhHhh---hc--CCceEEEeccC
Confidence            4789999999999999999999999999999998876433 2111  1122211   11111   11  69999998873


Q ss_pred             h----------hHHHHHHhhccC--CEEEEEeccc
Q 028523           99 K----------MLDAVLLNMRIQ--GRITLCGMIS  121 (208)
Q Consensus        99 ~----------~~~~~~~~l~~~--G~~v~~g~~~  121 (208)
                      .          ..+..+..|+.-  -|+..+|...
T Consensus        73 ~~~~~~~~~~k~~~~li~~l~~agv~RllVVGGAG  107 (211)
T COG2910          73 GASDNDELHSKSIEALIEALKGAGVPRLLVVGGAG  107 (211)
T ss_pred             CCCChhHHHHHHHHHHHHHHhhcCCeeEEEEcCcc
Confidence            2          133456666663  4788887643

>PF03807 F420_oxidored: NADP oxidoreductase coenzyme F420-dependent; InterPro: IPR004455 The function of F420-dependent NADP reductase is the transfer of electrons from reduced coenzyme F420 into an electron transport chain

Probab=97.23  E-value=0.014  Score=36.52  Aligned_cols=86  Identities=16%  Similarity=0.176  Sum_probs=58.6

Q ss_pred             EEEEecCCchHHHHHHHHHHHcC---CEEEEE-eCCHHHHHHHHHhcCCCeeEecCCCccHHHHHHhHCCCCccEEEeCC
Q 028523           21 YVFVSAASGAVGQLVGQFAKLVG---CYVVGS-AGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENV   96 (208)
Q Consensus        21 ~vli~ga~g~vG~~a~qla~~~g---~~v~~~-~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~d~v~d~~   96 (208)
                      +|.|.| +|.+|.+.++-....|   .+|+.+ .+++++.+.+.++++......     +..+.+++     .|+||-|+
T Consensus         1 kI~iIG-~G~mg~al~~~l~~~g~~~~~v~~~~~r~~~~~~~~~~~~~~~~~~~-----~~~~~~~~-----advvilav   69 (96)
T PF03807_consen    1 KIGIIG-AGNMGSALARGLLASGIKPHEVIIVSSRSPEKAAELAKEYGVQATAD-----DNEEAAQE-----ADVVILAV   69 (96)
T ss_dssp             EEEEES-TSHHHHHHHHHHHHTTS-GGEEEEEEESSHHHHHHHHHHCTTEEESE-----EHHHHHHH-----TSEEEE-S
T ss_pred             CEEEEC-CCHHHHHHHHHHHHCCCCceeEEeeccCcHHHHHHHHHhhccccccC-----ChHHhhcc-----CCEEEEEE
Confidence            466777 5999999999888888   788855 999999988876777533221     33444443     79999999


Q ss_pred             CchhHHHHHHhh---ccCCEEEEE
Q 028523           97 GGKMLDAVLLNM---RIQGRITLC  117 (208)
Q Consensus        97 g~~~~~~~~~~l---~~~G~~v~~  117 (208)
                      ....+...++.+   .++..++.+
T Consensus        70 ~p~~~~~v~~~i~~~~~~~~vis~   93 (96)
T PF03807_consen   70 KPQQLPEVLSEIPHLLKGKLVISI   93 (96)
T ss_dssp             -GGGHHHHHHHHHHHHTTSEEEEE
T ss_pred             CHHHHHHHHHHHhhccCCCEEEEe
Confidence            977666555544   445566554

It catalyses the reduction of F420 with NADP(+) and the reduction of NADP(+) with F420H(2).; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2IZZ_B 2GR9_B 2GRA_B 2GER_C 2AMF_E 2AHR_C 2VQ3_B 2VNS_B 2RCY_D 2YJZ_D ....

>PRK12744 short chain dehydrogenase; Provisional

Probab=97.22  E-value=0.0029  Score=47.32  Aligned_cols=81  Identities=12%  Similarity=0.155  Sum_probs=49.3

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCH----HHHHHHHH---hcCCC-e--eEecCCCccHHHHHHhHCC-
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSK----DKVDLLKN---KFGFD-E--AFNYKEEPDLDAALKRYFP-   86 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~----~~~~~~~~---~~g~~-~--v~~~~~~~~~~~~~~~~~~-   86 (208)
                      .+.+++|+||+|++|...++.+...|++|++++++.    +..+.+.+   ..+.. .  .+|..+..+..+.+.+... 
T Consensus         7 ~~k~vlItGa~~gIG~~~a~~l~~~G~~vv~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   86 (257)
T PRK12744          7 KGKVVLIAGGAKNLGGLIARDLAAQGAKAVAIHYNSAASKADAEETVAAVKAAGAKAVAFQADLTTAAAVEKLFDDAKAA   86 (257)
T ss_pred             CCcEEEEECCCchHHHHHHHHHHHCCCcEEEEecCCccchHHHHHHHHHHHHhCCcEEEEecCcCCHHHHHHHHHHHHHh
Confidence            467899999999999999998888899977665432    22222221   23332 1  2344443233333333221 


Q ss_pred             -CCccEEEeCCCc
Q 028523           87 -EGINIYFENVGG   98 (208)
Q Consensus        87 -~~~d~v~d~~g~   98 (208)
                       +++|++|++.|.
T Consensus        87 ~~~id~li~~ag~   99 (257)
T PRK12744         87 FGRPDIAINTVGK   99 (257)
T ss_pred             hCCCCEEEECCcc
Confidence             368999998873

>PLN03075 nicotianamine synthase; Provisional

Probab=97.22  E-value=0.0057  Score=46.55  Aligned_cols=97  Identities=11%  Similarity=0.023  Sum_probs=65.6

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHhcCC----CeeEecCCCccHHHHHHhHCCCCccE
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLV--GCYVVGSAGSKDKVDLLKNKFGF----DEAFNYKEEPDLDAALKRYFPEGINI   91 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~--g~~v~~~~~s~~~~~~~~~~~g~----~~v~~~~~~~~~~~~~~~~~~~~~d~   91 (208)
                      .+++|+-.| +|+.|+.++-+++..  +.+++.++.+++..+.+++.+..    ..-+..... +..+....  .++||+
T Consensus       123 ~p~~VldIG-cGpgpltaiilaa~~~p~~~~~giD~d~~ai~~Ar~~~~~~~gL~~rV~F~~~-Da~~~~~~--l~~FDl  198 (296)
T PLN03075        123 VPTKVAFVG-SGPLPLTSIVLAKHHLPTTSFHNFDIDPSANDVARRLVSSDPDLSKRMFFHTA-DVMDVTES--LKEYDV  198 (296)
T ss_pred             CCCEEEEEC-CCCcHHHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHhhhccCccCCcEEEEC-chhhcccc--cCCcCE
Confidence            778899988 699999888888655  45899999999988888754422    221222222 33221111  137999


Q ss_pred             EEeCC------C--chhHHHHHHhhccCCEEEEEe
Q 028523           92 YFENV------G--GKMLDAVLLNMRIQGRITLCG  118 (208)
Q Consensus        92 v~d~~------g--~~~~~~~~~~l~~~G~~v~~g  118 (208)
                      ||..+      .  ...+....+.|+|||.++.-.
T Consensus       199 VF~~ALi~~dk~~k~~vL~~l~~~LkPGG~Lvlr~  233 (296)
T PLN03075        199 VFLAALVGMDKEEKVKVIEHLGKHMAPGALLMLRS  233 (296)
T ss_pred             EEEecccccccccHHHHHHHHHHhcCCCcEEEEec
Confidence            98875      2  136889999999999987644

>PRK14027 quinate/shikimate dehydrogenase; Provisional

Probab=97.21  E-value=0.007  Score=46.08  Aligned_cols=46  Identities=17%  Similarity=0.135  Sum_probs=37.9

Q ss_pred             CCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHhc
Q 028523           17 KQGEYVFVSAASGAVGQLVGQFAKLVGC-YVVGSAGSKDKVDLLKNKF   63 (208)
Q Consensus        17 ~~g~~vli~ga~g~vG~~a~qla~~~g~-~v~~~~~s~~~~~~~~~~~   63 (208)
                      .++.+++|.|+ ||.+.+++.-+...|+ +++++.|+.++.+.+.+.+
T Consensus       125 ~~~k~vlilGa-GGaarAi~~aL~~~g~~~i~i~nR~~~ka~~La~~~  171 (283)
T PRK14027        125 AKLDSVVQVGA-GGVGNAVAYALVTHGVQKLQVADLDTSRAQALADVI  171 (283)
T ss_pred             cCCCeEEEECC-cHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHH
Confidence            35788999996 9999998888888998 8999999988877776444

>PRK07041 short chain dehydrogenase; Provisional

Probab=97.20  E-value=0.0025  Score=46.69  Aligned_cols=73  Identities=16%  Similarity=0.221  Sum_probs=49.5

Q ss_pred             EEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhc--CCC-e--eEecCCCccHHHHHHhHCCCCccEEEeCCC
Q 028523           23 FVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKF--GFD-E--AFNYKEEPDLDAALKRYFPEGINIYFENVG   97 (208)
Q Consensus        23 li~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~--g~~-~--v~~~~~~~~~~~~~~~~~~~~~d~v~d~~g   97 (208)
                      +|+||+|++|...++.+...|++|+++++++++.+.+.+.+  +.. .  ..|..+..++.+.+.+.  +++|++|++.|
T Consensus         1 lItGas~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~--~~id~li~~ag   78 (230)
T PRK07041          1 LVVGGSSGIGLALARAFAAEGARVTIASRSRDRLAAAARALGGGAPVRTAALDITDEAAVDAFFAEA--GPFDHVVITAA   78 (230)
T ss_pred             CeecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHhc--CCCCEEEECCC
Confidence            58999999999999888888999999999877766544333  221 2  23444432333333322  36899999887

>PRK06123 short chain dehydrogenase; Provisional

Probab=97.20  E-value=0.0035  Score=46.47  Aligned_cols=79  Identities=16%  Similarity=0.215  Sum_probs=48.9

Q ss_pred             CCEEEEecCCchHHHHHHHHHHHcCCEEEEEe-CCHHHHHHHHH---hcCCCe---eEecCCCccHHHHHHhHCC--CCc
Q 028523           19 GEYVFVSAASGAVGQLVGQFAKLVGCYVVGSA-GSKDKVDLLKN---KFGFDE---AFNYKEEPDLDAALKRYFP--EGI   89 (208)
Q Consensus        19 g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~-~s~~~~~~~~~---~~g~~~---v~~~~~~~~~~~~~~~~~~--~~~   89 (208)
                      +.++||+||+|++|...++.....|++|+.+. +++++.+.+.+   ..+...   ..|..+...+.+.+.....  +++
T Consensus         2 ~~~~lVtG~~~~iG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   81 (248)
T PRK06123          2 RKVMIITGASRGIGAATALLAAERGYAVCLNYLRNRDAAEAVVQAIRRQGGEALAVAADVADEADVLRLFEAVDRELGRL   81 (248)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCeEEEecCCCHHHHHHHHHHHHhCCCcEEEEEeccCCHHHHHHHHHHHHHHhCCC
Confidence            45799999999999998888888899887765 34443333321   233321   2344443233333333322  368


Q ss_pred             cEEEeCCC
Q 028523           90 NIYFENVG   97 (208)
Q Consensus        90 d~v~d~~g   97 (208)
                      |++|.+.|
T Consensus        82 d~li~~ag   89 (248)
T PRK06123         82 DALVNNAG   89 (248)
T ss_pred             CEEEECCC
Confidence            99999887

>PRK09730 putative NAD(P)-binding oxidoreductase; Provisional

Probab=97.19  E-value=0.0026  Score=47.09  Aligned_cols=79  Identities=15%  Similarity=0.126  Sum_probs=50.0

Q ss_pred             CEEEEecCCchHHHHHHHHHHHcCCEEEEE-eCCHHHHHHHHH---hcCCC-e--eEecCCCccHHHHHHhHC--CCCcc
Q 028523           20 EYVFVSAASGAVGQLVGQFAKLVGCYVVGS-AGSKDKVDLLKN---KFGFD-E--AFNYKEEPDLDAALKRYF--PEGIN   90 (208)
Q Consensus        20 ~~vli~ga~g~vG~~a~qla~~~g~~v~~~-~~s~~~~~~~~~---~~g~~-~--v~~~~~~~~~~~~~~~~~--~~~~d   90 (208)
                      .+++|+||+|++|...++.+...|++|+++ .+++++.+...+   ..+.. .  ..|..+...+...+.+..  .+++|
T Consensus         2 ~~~lItGa~g~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~i~~~~~~~~~~~~~id   81 (247)
T PRK09730          2 AIALVTGGSRGIGRATALLLAQEGYTVAVNYQQNLHAAQEVVNLITQAGGKAFVLQADISDENQVVAMFTAIDQHDEPLA   81 (247)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhCCCeEEEEEccCCCHHHHHHHHHHHHHhCCCCC
Confidence            478999999999999999888889998764 455554333221   23322 1  234444423333344332  23799


Q ss_pred             EEEeCCCc
Q 028523           91 IYFENVGG   98 (208)
Q Consensus        91 ~v~d~~g~   98 (208)
                      .+|.+.|.
T Consensus        82 ~vi~~ag~   89 (247)
T PRK09730         82 ALVNNAGI   89 (247)
T ss_pred             EEEECCCC
Confidence            99999873

>TIGR01809 Shik-DH-AROM shikimate-5-dehydrogenase, fungal AROM-type

Probab=97.18  E-value=0.0024  Score=48.64  Aligned_cols=75  Identities=12%  Similarity=-0.035  Sum_probs=51.4

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHhcCCCe-eEecCCCccHHHHHHhHCCCCccEEEeC
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGC-YVVGSAGSKDKVDLLKNKFGFDE-AFNYKEEPDLDAALKRYFPEGINIYFEN   95 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~-~v~~~~~s~~~~~~~~~~~g~~~-v~~~~~~~~~~~~~~~~~~~~~d~v~d~   95 (208)
                      ++.+++|.|+ |+.|.+++.-+...|+ +|+++.|+.++.+.+.++++... +....   .. +.+.... ..+|+||+|
T Consensus       124 ~~k~vlvlGa-GGaarai~~aL~~~G~~~i~I~nRt~~ka~~La~~~~~~~~~~~~~---~~-~~~~~~~-~~~DiVIna  197 (282)
T TIGR01809       124 AGFRGLVIGA-GGTSRAAVYALASLGVTDITVINRNPDKLSRLVDLGVQVGVITRLE---GD-SGGLAIE-KAAEVLVST  197 (282)
T ss_pred             CCceEEEEcC-cHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhhhcCcceecc---ch-hhhhhcc-cCCCEEEEC
Confidence            5789999995 9999999998889998 89999999988877765654321 11111   00 1111111 258999999


Q ss_pred             CCc
Q 028523           96 VGG   98 (208)
Q Consensus        96 ~g~   98 (208)
                      ++.
T Consensus       198 Tp~  200 (282)
T TIGR01809       198 VPA  200 (282)
T ss_pred             CCC
Confidence            883

This model represents a clade of shikimate-5-dehydrogenases found in Corynebacterium, Mycobacteria and fungi. The fungal sequences are pentafunctional proteins known as AroM which contain the central five seven steps in the chorismate biosynthesis pathway. The Corynebacterium and Mycobacterial sequences represent the sole shikimate-5-dehydrogenases in species which otherwise have every enzyme of the chorismate biosynthesis pathway.

>TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase

Probab=97.17  E-value=0.0036  Score=48.67  Aligned_cols=75  Identities=11%  Similarity=0.105  Sum_probs=47.8

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcC--CEEEEEeCCHHHHHHHHHhcCCC--ee--EecCCCccHHHHHHhHCCCCccE
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVG--CYVVGSAGSKDKVDLLKNKFGFD--EA--FNYKEEPDLDAALKRYFPEGINI   91 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g--~~v~~~~~s~~~~~~~~~~~g~~--~v--~~~~~~~~~~~~~~~~~~~~~d~   91 (208)
                      +|.+|||+||+|.+|...++.+...|  .+|++.+++..+...+.+.+...  ..  .|..+.    +.+.+... ++|+
T Consensus         3 ~~k~vLVTGatG~IG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Dl~d~----~~l~~~~~-~iD~   77 (324)
T TIGR03589         3 NNKSILITGGTGSFGKAFISRLLENYNPKKIIIYSRDELKQWEMQQKFPAPCLRFFIGDVRDK----ERLTRALR-GVDY   77 (324)
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHhCCCcEEEEEcCChhHHHHHHHHhCCCcEEEEEccCCCH----HHHHHHHh-cCCE
Confidence            46789999999999999888776665  58988887766544343233221  11  244432    12222222 4899


Q ss_pred             EEeCCC
Q 028523           92 YFENVG   97 (208)
Q Consensus        92 v~d~~g   97 (208)
                      ||.+.+
T Consensus        78 Vih~Ag   83 (324)
T TIGR03589        78 VVHAAA   83 (324)
T ss_pred             EEECcc
Confidence            999876

This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family.

>PLN02896 cinnamyl-alcohol dehydrogenase

Probab=97.16  E-value=0.0067  Score=47.70  Aligned_cols=78  Identities=19%  Similarity=0.220  Sum_probs=51.5

Q ss_pred             CCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhc--CCC-eeE--ecCCCccHHHHHHhHCCCCc
Q 028523           15 SPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKF--GFD-EAF--NYKEEPDLDAALKRYFPEGI   89 (208)
Q Consensus        15 ~~~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~--g~~-~v~--~~~~~~~~~~~~~~~~~~~~   89 (208)
                      +-..+.+|||+||+|.+|..+++.+...|.+|++++++.++.+.+.+.+  +.. .++  |..+.    +.+.+... ++
T Consensus         6 ~~~~~~~vLVtG~~GfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~----~~~~~~~~-~~   80 (353)
T PLN02896          6 RESATGTYCVTGATGYIGSWLVKLLLQRGYTVHATLRDPAKSLHLLSKWKEGDRLRLFRADLQEE----GSFDEAVK-GC   80 (353)
T ss_pred             cccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHhhccCCeEEEEECCCCCH----HHHHHHHc-CC
Confidence            3456789999999999999999988888999999988776554433232  111 122  22221    22333222 48


Q ss_pred             cEEEeCCC
Q 028523           90 NIYFENVG   97 (208)
Q Consensus        90 d~v~d~~g   97 (208)
                      |+||.+.+
T Consensus        81 d~Vih~A~   88 (353)
T PLN02896         81 DGVFHVAA   88 (353)
T ss_pred             CEEEECCc
Confidence            99999876

>PRK13656 trans-2-enoyl-CoA reductase; Provisional

Probab=97.16  E-value=0.0035  Score=49.43  Aligned_cols=81  Identities=14%  Similarity=0.086  Sum_probs=49.2

Q ss_pred             CCCCEEEEecCCchHHHH--HHHHHHHcCCEEEEEeCCHH--H-------------HH-HHHHhcCCCe-e--EecCCCc
Q 028523           17 KQGEYVFVSAASGAVGQL--VGQFAKLVGCYVVGSAGSKD--K-------------VD-LLKNKFGFDE-A--FNYKEEP   75 (208)
Q Consensus        17 ~~g~~vli~ga~g~vG~~--a~qla~~~g~~v~~~~~s~~--~-------------~~-~~~~~~g~~~-v--~~~~~~~   75 (208)
                      ..++++||+|+++++|++  .++.+ ..|++++++....+  +             .. .++ +.|... .  .|..+..
T Consensus        39 ~ggK~aLVTGaSsGIGlA~~IA~al-~~GA~Vi~v~~~~~~~~~~~~tagwy~~~a~~~~a~-~~G~~a~~i~~DVss~E  116 (398)
T PRK13656         39 NGPKKVLVIGASSGYGLASRIAAAF-GAGADTLGVFFEKPGTEKKTGTAGWYNSAAFDKFAK-AAGLYAKSINGDAFSDE  116 (398)
T ss_pred             CCCCEEEEECCCchHhHHHHHHHHH-HcCCeEEEEecCcchhhhcccccccchHHHHHHHHH-hcCCceEEEEcCCCCHH
Confidence            456899999999999999  45666 88998888873221  1             22 333 556532 2  2333321


Q ss_pred             cHHHHHHhHCC--CCccEEEeCCCch
Q 028523           76 DLDAALKRYFP--EGINIYFENVGGK   99 (208)
Q Consensus        76 ~~~~~~~~~~~--~~~d~v~d~~g~~   99 (208)
                      ...+.+.....  +++|+++++++..
T Consensus       117 ~v~~lie~I~e~~G~IDiLVnSaA~~  142 (398)
T PRK13656        117 IKQKVIELIKQDLGQVDLVVYSLASP  142 (398)
T ss_pred             HHHHHHHHHHHhcCCCCEEEECCccC
Confidence            23333333322  3699999998843

>PTZ00098 phosphoethanolamine N-methyltransferase; Provisional

Probab=97.15  E-value=0.0062  Score=45.90  Aligned_cols=107  Identities=10%  Similarity=0.171  Sum_probs=67.7

Q ss_pred             HHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHHHHhHCCC
Q 028523            8 AGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPE   87 (208)
Q Consensus         8 ~~l~~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~   87 (208)
                      ..+....+++++.+||=.|+  |.|..+..+++..+++|++++.++.-.+.+++.+.....+..... ++.+  ....++
T Consensus        42 ~~~l~~l~l~~~~~VLDiGc--G~G~~a~~la~~~~~~v~giD~s~~~~~~a~~~~~~~~~i~~~~~-D~~~--~~~~~~  116 (263)
T PTZ00098         42 TKILSDIELNENSKVLDIGS--GLGGGCKYINEKYGAHVHGVDICEKMVNIAKLRNSDKNKIEFEAN-DILK--KDFPEN  116 (263)
T ss_pred             HHHHHhCCCCCCCEEEEEcC--CCChhhHHHHhhcCCEEEEEECCHHHHHHHHHHcCcCCceEEEEC-Cccc--CCCCCC
Confidence            33435567889999998884  346666777777788999999999888888743332111111111 2111  011123


Q ss_pred             CccEEEeC-----CC----chhHHHHHHhhccCCEEEEEec
Q 028523           88 GINIYFEN-----VG----GKMLDAVLLNMRIQGRITLCGM  119 (208)
Q Consensus        88 ~~d~v~d~-----~g----~~~~~~~~~~l~~~G~~v~~g~  119 (208)
                      .||+|+..     .+    ...+..+.+.|+|||+++....
T Consensus       117 ~FD~V~s~~~l~h~~~~d~~~~l~~i~r~LkPGG~lvi~d~  157 (263)
T PTZ00098        117 TFDMIYSRDAILHLSYADKKKLFEKCYKWLKPNGILLITDY  157 (263)
T ss_pred             CeEEEEEhhhHHhCCHHHHHHHHHHHHHHcCCCcEEEEEEe
Confidence            69999862     11    1257888899999999987654

>KOG1207 consensus Diacetyl reductase/L-xylulose reductase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=97.14  E-value=0.004  Score=43.28  Aligned_cols=76  Identities=21%  Similarity=0.197  Sum_probs=53.2

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCe----eEecCCCccHHHHHHhHCCC-CccEE
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDE----AFNYKEEPDLDAALKRYFPE-GINIY   92 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~----v~~~~~~~~~~~~~~~~~~~-~~d~v   92 (208)
                      .|..|+++|+.-++|...++-+...|++|+++.|.++.+..+. +.-...    +.|..   +|+...+-+.+- .+|..
T Consensus         6 aG~~vlvTgagaGIG~~~v~~La~aGA~ViAvaR~~a~L~sLV-~e~p~~I~Pi~~Dls---~wea~~~~l~~v~pidgL   81 (245)
T KOG1207|consen    6 AGVIVLVTGAGAGIGKEIVLSLAKAGAQVIAVARNEANLLSLV-KETPSLIIPIVGDLS---AWEALFKLLVPVFPIDGL   81 (245)
T ss_pred             cceEEEeecccccccHHHHHHHHhcCCEEEEEecCHHHHHHHH-hhCCcceeeeEeccc---HHHHHHHhhcccCchhhh
Confidence            5788999999899999999999999999999999999988776 332221    22222   344333333332 56666


Q ss_pred             EeCCC
Q 028523           93 FENVG   97 (208)
Q Consensus        93 ~d~~g   97 (208)
                      ++..|
T Consensus        82 VNNAg   86 (245)
T KOG1207|consen   82 VNNAG   86 (245)
T ss_pred             hccch
Confidence            66555

>TIGR01500 sepiapter_red sepiapterin reductase

Probab=97.13  E-value=0.0034  Score=46.99  Aligned_cols=43  Identities=28%  Similarity=0.320  Sum_probs=33.4

Q ss_pred             EEEEecCCchHHHHHHHHH-HH---cCCEEEEEeCCHHHHHHHHHhc
Q 028523           21 YVFVSAASGAVGQLVGQFA-KL---VGCYVVGSAGSKDKVDLLKNKF   63 (208)
Q Consensus        21 ~vli~ga~g~vG~~a~qla-~~---~g~~v~~~~~s~~~~~~~~~~~   63 (208)
                      .++|+||++++|...++.+ +.   .|++|+.+.+++++.+.+.+++
T Consensus         2 ~vlItGas~GIG~~~a~~la~~~~~~g~~V~~~~r~~~~~~~~~~~l   48 (256)
T TIGR01500         2 VCLVTGASRGFGRTIAQELAKCLKSPGSVLVLSARNDEALRQLKAEI   48 (256)
T ss_pred             EEEEecCCCchHHHHHHHHHHhhccCCcEEEEEEcCHHHHHHHHHHH
Confidence            5899999999998876544 42   6899999999988776655343

This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs.

>PLN02989 cinnamyl-alcohol dehydrogenase family protein

Probab=97.13  E-value=0.0026  Score=49.29  Aligned_cols=39  Identities=18%  Similarity=0.266  Sum_probs=33.7

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHH
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKV   56 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~   56 (208)
                      .+.++||+||+|.+|..+++.+...|++|++++++.++.
T Consensus         4 ~~k~vlVtG~~G~IG~~l~~~L~~~G~~V~~~~r~~~~~   42 (325)
T PLN02989          4 GGKVVCVTGASGYIASWIVKLLLFRGYTINATVRDPKDR   42 (325)
T ss_pred             CCCEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCCcch
Confidence            468999999999999999998888899999888776543

>PLN03139 formate dehydrogenase; Provisional

Probab=97.13  E-value=0.019  Score=45.69  Aligned_cols=91  Identities=23%  Similarity=0.185  Sum_probs=64.9

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHHHHhHCCCCccEEEeCCC
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVG   97 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~d~v~d~~g   97 (208)
                      .|.+|.|+| .|.+|...++.++.+|.+|++.+++....+... +.|...+     . ++.+.+.     ..|+|+.+..
T Consensus       198 ~gktVGIVG-~G~IG~~vA~~L~afG~~V~~~d~~~~~~~~~~-~~g~~~~-----~-~l~ell~-----~sDvV~l~lP  264 (386)
T PLN03139        198 EGKTVGTVG-AGRIGRLLLQRLKPFNCNLLYHDRLKMDPELEK-ETGAKFE-----E-DLDAMLP-----KCDVVVINTP  264 (386)
T ss_pred             CCCEEEEEe-ecHHHHHHHHHHHHCCCEEEEECCCCcchhhHh-hcCceec-----C-CHHHHHh-----hCCEEEEeCC
Confidence            578999999 599999999999999999999887654434344 5554211     1 3444443     2799998877


Q ss_pred             -chh-----HHHHHHhhccCCEEEEEeccc
Q 028523           98 -GKM-----LDAVLLNMRIQGRITLCGMIS  121 (208)
Q Consensus        98 -~~~-----~~~~~~~l~~~G~~v~~g~~~  121 (208)
                       .+.     -...+..|+++..+|.++...
T Consensus       265 lt~~T~~li~~~~l~~mk~ga~lIN~aRG~  294 (386)
T PLN03139        265 LTEKTRGMFNKERIAKMKKGVLIVNNARGA  294 (386)
T ss_pred             CCHHHHHHhCHHHHhhCCCCeEEEECCCCc
Confidence             331     246788999999999887643

>PRK12827 short chain dehydrogenase; Provisional

Probab=97.13  E-value=0.0026  Score=47.08  Aligned_cols=80  Identities=20%  Similarity=0.254  Sum_probs=48.8

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeC----CHHHHHHHHHh---cCCC-e--eEecCCCccHHHHHHhHCC-
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAG----SKDKVDLLKNK---FGFD-E--AFNYKEEPDLDAALKRYFP-   86 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~----s~~~~~~~~~~---~g~~-~--v~~~~~~~~~~~~~~~~~~-   86 (208)
                      .+.+++|+||+|++|...++.+...|++|+++++    +.+..+.+.++   .+.. .  ..|..+.......+..... 
T Consensus         5 ~~~~ilItGasg~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~   84 (249)
T PRK12827          5 DSRRVLITGGSGGLGRAIAVRLAADGADVIVLDIHPMRGRAEADAVAAGIEAAGGKALGLAFDVRDFAATRAALDAGVEE   84 (249)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEcCcccccHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence            3578999999999999999888888999988654    33333322212   2322 1  2333333123333332211 


Q ss_pred             -CCccEEEeCCC
Q 028523           87 -EGINIYFENVG   97 (208)
Q Consensus        87 -~~~d~v~d~~g   97 (208)
                       +++|.+|.+.|
T Consensus        85 ~~~~d~vi~~ag   96 (249)
T PRK12827         85 FGRLDILVNNAG   96 (249)
T ss_pred             hCCCCEEEECCC
Confidence             36899999887

>PRK12748 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=97.13  E-value=0.0024  Score=47.68  Aligned_cols=35  Identities=20%  Similarity=0.114  Sum_probs=30.1

Q ss_pred             CCCEEEEecCCc--hHHHHHHHHHHHcCCEEEEEeCC
Q 028523           18 QGEYVFVSAASG--AVGQLVGQFAKLVGCYVVGSAGS   52 (208)
Q Consensus        18 ~g~~vli~ga~g--~vG~~a~qla~~~g~~v~~~~~s   52 (208)
                      .+.++||+||++  ++|...+..+...|++|++++++
T Consensus         4 ~~k~vlItGas~~~giG~~la~~l~~~G~~vi~~~r~   40 (256)
T PRK12748          4 MKKIALVTGASRLNGIGAAVCRRLAAKGIDIFFTYWS   40 (256)
T ss_pred             CCcEEEEeCCCCCCCHHHHHHHHHHHcCCcEEEEcCC
Confidence            457899999984  89999888887889999999877

>KOG1610 consensus Corticosteroid 11-beta-dehydrogenase and related short chain-type dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only]

Probab=97.12  E-value=0.026  Score=43.03  Aligned_cols=107  Identities=15%  Similarity=0.201  Sum_probs=74.5

Q ss_pred             CCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCC----CeeEecCCCcc---HHHHHHhHCCC-C
Q 028523           17 KQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGF----DEAFNYKEEPD---LDAALKRYFPE-G   88 (208)
Q Consensus        17 ~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~----~~v~~~~~~~~---~~~~~~~~~~~-~   88 (208)
                      -++..|+|+|+-+|.|..++.-+...|.+|++.|..++..+.++.+..-    +-.+|..+++.   ....+++..+. +
T Consensus        27 ~~~k~VlITGCDSGfG~~LA~~L~~~Gf~V~Agcl~~~gae~L~~~~~s~rl~t~~LDVT~~esi~~a~~~V~~~l~~~g  106 (322)
T KOG1610|consen   27 LSDKAVLITGCDSGFGRLLAKKLDKKGFRVFAGCLTEEGAESLRGETKSPRLRTLQLDVTKPESVKEAAQWVKKHLGEDG  106 (322)
T ss_pred             cCCcEEEEecCCcHHHHHHHHHHHhcCCEEEEEeecCchHHHHhhhhcCCcceeEeeccCCHHHHHHHHHHHHHhccccc
Confidence            3566799999999999999998999999999999888777766633311    12456555423   33344555555 7


Q ss_pred             ccEEEeCCC-ch--------------------------hHHHHHHhhcc-CCEEEEEeccccc
Q 028523           89 INIYFENVG-GK--------------------------MLDAVLLNMRI-QGRITLCGMISQY  123 (208)
Q Consensus        89 ~d~v~d~~g-~~--------------------------~~~~~~~~l~~-~G~~v~~g~~~~~  123 (208)
                      .=-++++.| ..                          .-...+.++++ .||+|.+++..+.
T Consensus       107 LwglVNNAGi~~~~g~~ewl~~~d~~~~l~vNllG~irvT~~~lpLlr~arGRvVnvsS~~GR  169 (322)
T KOG1610|consen  107 LWGLVNNAGISGFLGPDEWLTVEDYRKVLNVNLLGTIRVTKAFLPLLRRARGRVVNVSSVLGR  169 (322)
T ss_pred             ceeEEeccccccccCccccccHHHHHHHHhhhhhhHHHHHHHHHHHHHhccCeEEEecccccC
Confidence            778888887 21                          12345566666 7999999988774

>PRK07023 short chain dehydrogenase; Provisional

Probab=97.11  E-value=0.004  Score=46.10  Aligned_cols=75  Identities=19%  Similarity=0.216  Sum_probs=48.4

Q ss_pred             EEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCe---eEecCCCccHHHHHHh-----HCC-CCccE
Q 028523           21 YVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDE---AFNYKEEPDLDAALKR-----YFP-EGINI   91 (208)
Q Consensus        21 ~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~---v~~~~~~~~~~~~~~~-----~~~-~~~d~   91 (208)
                      ++||+||+|++|...++.+...|++|++++++.++. ... ..+...   ..|..+..++...+.+     +.. +++|+
T Consensus         3 ~vlItGasggiG~~ia~~l~~~G~~v~~~~r~~~~~-~~~-~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (243)
T PRK07023          3 RAIVTGHSRGLGAALAEQLLQPGIAVLGVARSRHPS-LAA-AAGERLAEVELDLSDAAAAAAWLAGDLLAAFVDGASRVL   80 (243)
T ss_pred             eEEEecCCcchHHHHHHHHHhCCCEEEEEecCcchh-hhh-ccCCeEEEEEeccCCHHHHHHHHHHHHHHHhccCCCceE
Confidence            689999999999999988888899999999876542 222 334321   2444443233332222     122 26888


Q ss_pred             EEeCCC
Q 028523           92 YFENVG   97 (208)
Q Consensus        92 v~d~~g   97 (208)
                      ++.+.|
T Consensus        81 ~v~~ag   86 (243)
T PRK07023         81 LINNAG   86 (243)
T ss_pred             EEEcCc
Confidence            888876

>PRK11207 tellurite resistance protein TehB; Provisional

Probab=97.11  E-value=0.0029  Score=45.54  Aligned_cols=100  Identities=11%  Similarity=0.052  Sum_probs=62.4

Q ss_pred             HhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH---hcCCCeeEecCCCccHHHHHHhHCCCC
Q 028523           12 EVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKN---KFGFDEAFNYKEEPDLDAALKRYFPEG   88 (208)
Q Consensus        12 ~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~---~~g~~~v~~~~~~~~~~~~~~~~~~~~   88 (208)
                      +.....++.+||-.|+  |.|..+..+++. |.+|++++.|++-.+.+++   ..+... +..... ++.+.  .. ++.
T Consensus        24 ~~l~~~~~~~vLDiGc--G~G~~a~~La~~-g~~V~gvD~S~~~i~~a~~~~~~~~~~~-v~~~~~-d~~~~--~~-~~~   95 (197)
T PRK11207         24 EAVKVVKPGKTLDLGC--GNGRNSLYLAAN-GFDVTAWDKNPMSIANLERIKAAENLDN-LHTAVV-DLNNL--TF-DGE   95 (197)
T ss_pred             HhcccCCCCcEEEECC--CCCHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHHcCCCc-ceEEec-ChhhC--Cc-CCC
Confidence            4445667789999984  557788888875 7899999999886666552   222221 111111 22111  11 236


Q ss_pred             ccEEEeCCC---------chhHHHHHHhhccCCEEEEEec
Q 028523           89 INIYFENVG---------GKMLDAVLLNMRIQGRITLCGM  119 (208)
Q Consensus        89 ~d~v~d~~g---------~~~~~~~~~~l~~~G~~v~~g~  119 (208)
                      +|+|+....         ...+..+.+.|+|||.++.+..
T Consensus        96 fD~I~~~~~~~~~~~~~~~~~l~~i~~~LkpgG~~~~~~~  135 (197)
T PRK11207         96 YDFILSTVVLMFLEAKTIPGLIANMQRCTKPGGYNLIVAA  135 (197)
T ss_pred             cCEEEEecchhhCCHHHHHHHHHHHHHHcCCCcEEEEEEE
Confidence            999987532         1357788889999999655543

>PRK12824 acetoacetyl-CoA reductase; Provisional

Probab=97.10  E-value=0.004  Score=46.05  Aligned_cols=78  Identities=15%  Similarity=0.197  Sum_probs=47.9

Q ss_pred             CEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHH-HHHHHHHhcC---CC-e--eEecCCCccHHHHHHhHC--CCCcc
Q 028523           20 EYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKD-KVDLLKNKFG---FD-E--AFNYKEEPDLDAALKRYF--PEGIN   90 (208)
Q Consensus        20 ~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~-~~~~~~~~~g---~~-~--v~~~~~~~~~~~~~~~~~--~~~~d   90 (208)
                      .+++|+|++|++|..+++.+...|++|+.+++++. ..+...+.++   .. .  ..|..+.....+.+....  .+++|
T Consensus         3 k~vlItG~s~~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~id   82 (245)
T PRK12824          3 KIALVTGAKRGIGSAIARELLNDGYRVIATYFSGNDCAKDWFEEYGFTEDQVRLKELDVTDTEECAEALAEIEEEEGPVD   82 (245)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCcHHHHHHHHHHhhccCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCC
Confidence            47899999999999999888888999999998743 1221211222   11 1  233333312333233221  13699


Q ss_pred             EEEeCCC
Q 028523           91 IYFENVG   97 (208)
Q Consensus        91 ~v~d~~g   97 (208)
                      .++.+.|
T Consensus        83 ~vi~~ag   89 (245)
T PRK12824         83 ILVNNAG   89 (245)
T ss_pred             EEEECCC
Confidence            9999887

>PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=97.09  E-value=0.0041  Score=46.54  Aligned_cols=79  Identities=14%  Similarity=0.151  Sum_probs=49.1

Q ss_pred             CCCEEEEecCC--chHHHHHHHHHHHcCCEEEEEeCC-----------HHHH----HHHHHhcCCCe---eEecCCCccH
Q 028523           18 QGEYVFVSAAS--GAVGQLVGQFAKLVGCYVVGSAGS-----------KDKV----DLLKNKFGFDE---AFNYKEEPDL   77 (208)
Q Consensus        18 ~g~~vli~ga~--g~vG~~a~qla~~~g~~v~~~~~s-----------~~~~----~~~~~~~g~~~---v~~~~~~~~~   77 (208)
                      +|.+++|+||+  +++|...++.+...|++|++++++           .++.    +.++ +.|...   ..|..+..++
T Consensus         5 ~~k~vlVtGas~~~giG~~~a~~l~~~G~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~~~~D~~~~~~i   83 (256)
T PRK12859          5 KNKVAVVTGVSRLDGIGAAICKELAEAGADIFFTYWTAYDKEMPWGVDQDEQIQLQEELL-KNGVKVSSMELDLTQNDAP   83 (256)
T ss_pred             CCcEEEEECCCCCCChHHHHHHHHHHCCCeEEEEecccccccccccccHHHHHHHHHHHH-hcCCeEEEEEcCCCCHHHH
Confidence            57899999998  489999999888899999987532           1111    2222 334422   2344433233


Q ss_pred             HHHHHhHCC--CCccEEEeCCC
Q 028523           78 DAALKRYFP--EGINIYFENVG   97 (208)
Q Consensus        78 ~~~~~~~~~--~~~d~v~d~~g   97 (208)
                      .+.+.+...  +.+|++|.+.|
T Consensus        84 ~~~~~~~~~~~g~id~li~~ag  105 (256)
T PRK12859         84 KELLNKVTEQLGYPHILVNNAA  105 (256)
T ss_pred             HHHHHHHHHHcCCCcEEEECCC
Confidence            333433322  25899999876

>PLN02244 tocopherol O-methyltransferase

Probab=97.09  E-value=0.0077  Score=47.18  Aligned_cols=98  Identities=14%  Similarity=0.186  Sum_probs=63.6

Q ss_pred             CCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH---hcCCCeeEecCCCccHHHHHHhHCCCCccEEE
Q 028523           17 KQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKN---KFGFDEAFNYKEEPDLDAALKRYFPEGINIYF   93 (208)
Q Consensus        17 ~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~---~~g~~~v~~~~~~~~~~~~~~~~~~~~~d~v~   93 (208)
                      +++++||=.|.  |.|..+..+++..|++|++++.++...+.+++   +.|...-+..... +..+  ..+.++.||+|+
T Consensus       117 ~~~~~VLDiGC--G~G~~~~~La~~~g~~v~gvD~s~~~i~~a~~~~~~~g~~~~v~~~~~-D~~~--~~~~~~~FD~V~  191 (340)
T PLN02244        117 KRPKRIVDVGC--GIGGSSRYLARKYGANVKGITLSPVQAARANALAAAQGLSDKVSFQVA-DALN--QPFEDGQFDLVW  191 (340)
T ss_pred             CCCCeEEEecC--CCCHHHHHHHHhcCCEEEEEECCHHHHHHHHHHHHhcCCCCceEEEEc-Cccc--CCCCCCCccEEE
Confidence            67889998883  56777888888889999999999987776653   2233211111111 1111  011223699998


Q ss_pred             eCCCc-------hhHHHHHHhhccCCEEEEEec
Q 028523           94 ENVGG-------KMLDAVLLNMRIQGRITLCGM  119 (208)
Q Consensus        94 d~~g~-------~~~~~~~~~l~~~G~~v~~g~  119 (208)
                      .....       ..+..+.+.|+|||+++....
T Consensus       192 s~~~~~h~~d~~~~l~e~~rvLkpGG~lvi~~~  224 (340)
T PLN02244        192 SMESGEHMPDKRKFVQELARVAAPGGRIIIVTW  224 (340)
T ss_pred             ECCchhccCCHHHHHHHHHHHcCCCcEEEEEEe
Confidence            64321       357889999999999987653

>PRK07402 precorrin-6B methylase; Provisional

Probab=97.09  E-value=0.025  Score=40.63  Aligned_cols=104  Identities=15%  Similarity=0.206  Sum_probs=63.2

Q ss_pred             HHhcCCCCCCEEEEecCCchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHH---hcCCCeeEecCCCccHHHHHHhHCC
Q 028523           11 FEVCSPKQGEYVFVSAASGAVGQLVGQFAKLV-GCYVVGSAGSKDKVDLLKN---KFGFDEAFNYKEEPDLDAALKRYFP   86 (208)
Q Consensus        11 ~~~~~~~~g~~vli~ga~g~vG~~a~qla~~~-g~~v~~~~~s~~~~~~~~~---~~g~~~v~~~~~~~~~~~~~~~~~~   86 (208)
                      .....++++++||=.|+  |.|..++.+++.. +.+|++++.+++..+.+++   +++...+ ..... +..+.+.... 
T Consensus        33 ~~~l~~~~~~~VLDiG~--G~G~~~~~la~~~~~~~V~~vD~s~~~~~~a~~n~~~~~~~~v-~~~~~-d~~~~~~~~~-  107 (196)
T PRK07402         33 ISQLRLEPDSVLWDIGA--GTGTIPVEAGLLCPKGRVIAIERDEEVVNLIRRNCDRFGVKNV-EVIEG-SAPECLAQLA-  107 (196)
T ss_pred             HHhcCCCCCCEEEEeCC--CCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHhCCCCe-EEEEC-chHHHHhhCC-
Confidence            34457788899887773  4566666777654 5699999999988777663   3454322 11112 3322222222 


Q ss_pred             CCccEE-EeCCC--chhHHHHHHhhccCCEEEEEec
Q 028523           87 EGINIY-FENVG--GKMLDAVLLNMRIQGRITLCGM  119 (208)
Q Consensus        87 ~~~d~v-~d~~g--~~~~~~~~~~l~~~G~~v~~g~  119 (208)
                      ..+|.+ ++...  ...+..+.+.|++||+++....
T Consensus       108 ~~~d~v~~~~~~~~~~~l~~~~~~LkpgG~li~~~~  143 (196)
T PRK07402        108 PAPDRVCIEGGRPIKEILQAVWQYLKPGGRLVATAS  143 (196)
T ss_pred             CCCCEEEEECCcCHHHHHHHHHHhcCCCeEEEEEee
Confidence            224444 43322  2467888999999999887643

>PRK06718 precorrin-2 dehydrogenase; Reviewed

Probab=97.09  E-value=0.0038  Score=45.06  Aligned_cols=92  Identities=9%  Similarity=-0.003  Sum_probs=55.1

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHH-HHHHHHHhcCCCeeEecCCCccHHHHHHhHCCCCccEEEeCC
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKD-KVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENV   96 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~-~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~d~v~d~~   96 (208)
                      .|.+|+|.|| |.+|...++.+...|++|+++.+... ....+. .-+. -.+...   .+...  .  -.++|+||-++
T Consensus         9 ~~k~vLVIGg-G~va~~ka~~Ll~~ga~V~VIs~~~~~~l~~l~-~~~~-i~~~~~---~~~~~--~--l~~adlViaaT   78 (202)
T PRK06718          9 SNKRVVIVGG-GKVAGRRAITLLKYGAHIVVISPELTENLVKLV-EEGK-IRWKQK---EFEPS--D--IVDAFLVIAAT   78 (202)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEcCCCCHHHHHHH-hCCC-EEEEec---CCChh--h--cCCceEEEEcC
Confidence            5789999997 99999888888888999988875422 222222 1121 111111   11110  0  01589999999


Q ss_pred             CchhHHHHHHhhccCCEEEEEec
Q 028523           97 GGKMLDAVLLNMRIQGRITLCGM  119 (208)
Q Consensus        97 g~~~~~~~~~~l~~~G~~v~~g~  119 (208)
                      +.+..+..+...+..+.++....
T Consensus        79 ~d~elN~~i~~~a~~~~lvn~~d  101 (202)
T PRK06718         79 NDPRVNEQVKEDLPENALFNVIT  101 (202)
T ss_pred             CCHHHHHHHHHHHHhCCcEEECC
Confidence            97766655554444455665544

>TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain

Probab=97.08  E-value=0.0076  Score=43.63  Aligned_cols=92  Identities=18%  Similarity=0.124  Sum_probs=58.9

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHH-HHHHHHHhcCCCeeEecCCCccHHHHHHhHCCCCccEEEeCC
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKD-KVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENV   96 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~-~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~d~v~d~~   96 (208)
                      .|.+|||.|| |.+|..-++.+...|++|++++.... ....+. +.|.-..+ ..+. . ...+     .++|+||-++
T Consensus         8 ~gk~vlVvGg-G~va~rk~~~Ll~~ga~VtVvsp~~~~~l~~l~-~~~~i~~~-~~~~-~-~~dl-----~~~~lVi~at   77 (205)
T TIGR01470         8 EGRAVLVVGG-GDVALRKARLLLKAGAQLRVIAEELESELTLLA-EQGGITWL-ARCF-D-ADIL-----EGAFLVIAAT   77 (205)
T ss_pred             CCCeEEEECc-CHHHHHHHHHHHHCCCEEEEEcCCCCHHHHHHH-HcCCEEEE-eCCC-C-HHHh-----CCcEEEEECC
Confidence            4679999997 99999999999999999998875433 333333 33321121 1211 1 1111     2589999999


Q ss_pred             Cch-hHHHHHHhhccCCEEEEEec
Q 028523           97 GGK-MLDAVLLNMRIQGRITLCGM  119 (208)
Q Consensus        97 g~~-~~~~~~~~l~~~G~~v~~g~  119 (208)
                      +.+ .........+..|..+....
T Consensus        78 ~d~~ln~~i~~~a~~~~ilvn~~d  101 (205)
T TIGR01470        78 DDEELNRRVAHAARARGVPVNVVD  101 (205)
T ss_pred             CCHHHHHHHHHHHHHcCCEEEECC
Confidence            864 55556666666777776544

This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms.

>PF11017 DUF2855: Protein of unknown function (DUF2855); InterPro: IPR021276 This family of proteins has no known function

Probab=97.06  E-value=0.013  Score=44.96  Aligned_cols=97  Identities=21%  Similarity=0.209  Sum_probs=70.0

Q ss_pred             CCCCEEEEecCCchHHHHHHHHHH-HcC-CEEEEEeCCHHHHHHHHHhcCC-CeeEecCCCccHHHHHHhHCCCCccEEE
Q 028523           17 KQGEYVFVSAASGAVGQLVGQFAK-LVG-CYVVGSAGSKDKVDLLKNKFGF-DEAFNYKEEPDLDAALKRYFPEGINIYF   93 (208)
Q Consensus        17 ~~g~~vli~ga~g~vG~~a~qla~-~~g-~~v~~~~~s~~~~~~~~~~~g~-~~v~~~~~~~~~~~~~~~~~~~~~d~v~   93 (208)
                      -..+.|+|..||+=.++.++.+++ ..+ .+++..+ |..+..+.+ .+|. ++|+.|.+       +.++.....-+++
T Consensus       134 ~ga~~vvl~SASSKTA~glA~~L~~~~~~~~~vglT-S~~N~~Fve-~lg~Yd~V~~Yd~-------i~~l~~~~~~v~V  204 (314)
T PF11017_consen  134 FGAAQVVLSSASSKTAIGLAYCLKKQRGPPKVVGLT-SARNVAFVE-SLGCYDEVLTYDD-------IDSLDAPQPVVIV  204 (314)
T ss_pred             CCccEEEEeccchHHHHHHHHHhhccCCCceEEEEe-cCcchhhhh-ccCCceEEeehhh-------hhhccCCCCEEEE
Confidence            345778999999989988888887 444 4999998 778888888 9997 67888764       2333334567999


Q ss_pred             eCCCc-hhHHHHHHhhccC-CEEEEEecccc
Q 028523           94 ENVGG-KMLDAVLLNMRIQ-GRITLCGMISQ  122 (208)
Q Consensus        94 d~~g~-~~~~~~~~~l~~~-G~~v~~g~~~~  122 (208)
                      |+.|. +......+.+... -..+.+|..+.
T Consensus       205 DfaG~~~~~~~Lh~~l~d~l~~~~~VG~th~  235 (314)
T PF11017_consen  205 DFAGNGEVLAALHEHLGDNLVYSCLVGATHW  235 (314)
T ss_pred             ECCCCHHHHHHHHHHHhhhhhEEEEEEccCc
Confidence            99995 5666666666653 25667776654

>PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor

Probab=97.04  E-value=0.0036  Score=45.95  Aligned_cols=74  Identities=14%  Similarity=0.209  Sum_probs=51.8

Q ss_pred             EEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCC-eeEecCCCccHHHHHHhHCCCCccEEEeCCCc
Q 028523           22 VFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFD-EAFNYKEEPDLDAALKRYFPEGINIYFENVGG   98 (208)
Q Consensus        22 vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~-~v~~~~~~~~~~~~~~~~~~~~~d~v~d~~g~   98 (208)
                      |||+||+|-+|..++..+...|..|+...++..+......+.+.. ...|..+.+.+.+.+...   ++|.||.+.+.
T Consensus         1 IlI~GatG~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~dl~~~~~~~~~~~~~---~~d~vi~~a~~   75 (236)
T PF01370_consen    1 ILITGATGFIGSALVRQLLKKGHEVIVLSRSSNSESFEEKKLNVEFVIGDLTDKEQLEKLLEKA---NIDVVIHLAAF   75 (236)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTTEEEEEESCSTGGHHHHHHTTEEEEESETTSHHHHHHHHHHH---TESEEEEEBSS
T ss_pred             EEEEccCCHHHHHHHHHHHHcCCccccccccccccccccccceEEEEEeecccccccccccccc---CceEEEEeecc
Confidence            799999999999999999999999998888877665544233322 234555432333333332   68999998874

The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B ....

>PLN02986 cinnamyl-alcohol dehydrogenase family protein

Probab=97.01  E-value=0.0052  Score=47.62  Aligned_cols=40  Identities=23%  Similarity=0.279  Sum_probs=34.3

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHH
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVD   57 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~   57 (208)
                      .|.+|||+||+|.+|...++.+...|.+|++++++..+.+
T Consensus         4 ~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~   43 (322)
T PLN02986          4 GGKLVCVTGASGYIASWIVKLLLLRGYTVKATVRDLTDRK   43 (322)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCCcchH
Confidence            4689999999999999999888888999998888765443

>PLN00016 RNA-binding protein; Provisional

Probab=97.01  E-value=0.012  Score=46.82  Aligned_cols=95  Identities=15%  Similarity=0.179  Sum_probs=60.9

Q ss_pred             CCEEEEe----cCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHH-----------HHHhcCCCeeEecCCCccHHHHHHh
Q 028523           19 GEYVFVS----AASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDL-----------LKNKFGFDEAFNYKEEPDLDAALKR   83 (208)
Q Consensus        19 g~~vli~----ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~-----------~~~~~g~~~v~~~~~~~~~~~~~~~   83 (208)
                      ..+|||+    ||+|-+|..+++.+...|.+|++++++......           +. ..|...+ ..    ++.+ +..
T Consensus        52 ~~~VLVt~~~~GatG~iG~~lv~~L~~~G~~V~~l~R~~~~~~~~~~~~~~~~~~l~-~~~v~~v-~~----D~~d-~~~  124 (378)
T PLN00016         52 KKKVLIVNTNSGGHAFIGFYLAKELVKAGHEVTLFTRGKEPSQKMKKEPFSRFSELS-SAGVKTV-WG----DPAD-VKS  124 (378)
T ss_pred             cceEEEEeccCCCceeEhHHHHHHHHHCCCEEEEEecCCcchhhhccCchhhhhHhh-hcCceEE-Ee----cHHH-HHh
Confidence            4679999    999999999999888889999999988654221           11 2233222 11    2322 222


Q ss_pred             HCCC-CccEEEeCCCch--hHHHHHHhhccC--CEEEEEecc
Q 028523           84 YFPE-GINIYFENVGGK--MLDAVLLNMRIQ--GRITLCGMI  120 (208)
Q Consensus        84 ~~~~-~~d~v~d~~g~~--~~~~~~~~l~~~--G~~v~~g~~  120 (208)
                      .... ++|+|+++.+.+  .....++.++..  .+++.++..
T Consensus       125 ~~~~~~~d~Vi~~~~~~~~~~~~ll~aa~~~gvkr~V~~SS~  166 (378)
T PLN00016        125 KVAGAGFDVVYDNNGKDLDEVEPVADWAKSPGLKQFLFCSSA  166 (378)
T ss_pred             hhccCCccEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEEccH
Confidence            2222 799999998742  344555655543  378877754

>PRK08618 ornithine cyclodeaminase; Validated

Probab=97.00  E-value=0.0091  Score=46.48  Aligned_cols=94  Identities=10%  Similarity=0.055  Sum_probs=63.7

Q ss_pred             CCCCEEEEecCCchHHHHHHHHH-HHcCC-EEEEEeCCHHHHHHHHHhc----CCCeeEecCCCccHHHHHHhHCCCCcc
Q 028523           17 KQGEYVFVSAASGAVGQLVGQFA-KLVGC-YVVGSAGSKDKVDLLKNKF----GFDEAFNYKEEPDLDAALKRYFPEGIN   90 (208)
Q Consensus        17 ~~g~~vli~ga~g~vG~~a~qla-~~~g~-~v~~~~~s~~~~~~~~~~~----g~~~v~~~~~~~~~~~~~~~~~~~~~d   90 (208)
                      +...+++|+| +|+.|...+..+ ...+. +|.+..+++++.+.+.+++    +.. +..+.   ++.+.+.     ..|
T Consensus       125 ~~~~~v~iiG-aG~~a~~~~~al~~~~~~~~v~v~~r~~~~a~~~~~~~~~~~~~~-~~~~~---~~~~~~~-----~aD  194 (325)
T PRK08618        125 EDAKTLCLIG-TGGQAKGQLEAVLAVRDIERVRVYSRTFEKAYAFAQEIQSKFNTE-IYVVN---SADEAIE-----EAD  194 (325)
T ss_pred             CCCcEEEEEC-CcHHHHHHHHHHHhcCCccEEEEECCCHHHHHHHHHHHHHhcCCc-EEEeC---CHHHHHh-----cCC
Confidence            4567899999 599998776544 45677 8888899988876655333    432 22222   4444443     489


Q ss_pred             EEEeCCCchhHHHHHHhhccCCEEEEEeccc
Q 028523           91 IYFENVGGKMLDAVLLNMRIQGRITLCGMIS  121 (208)
Q Consensus        91 ~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~  121 (208)
                      +|+.|+++..-.-. +.+++|-++..+|...
T Consensus       195 iVi~aT~s~~p~i~-~~l~~G~hV~~iGs~~  224 (325)
T PRK08618        195 IIVTVTNAKTPVFS-EKLKKGVHINAVGSFM  224 (325)
T ss_pred             EEEEccCCCCcchH-HhcCCCcEEEecCCCC
Confidence            99999985322223 7889999999998754

>PRK08655 prephenate dehydrogenase; Provisional

Probab=97.00  E-value=0.013  Score=47.44  Aligned_cols=88  Identities=16%  Similarity=0.166  Sum_probs=55.7

Q ss_pred             EEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHHHHhHCCCCccEEEeCCCchh
Q 028523           21 YVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVGGKM  100 (208)
Q Consensus        21 ~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~  100 (208)
                      +|.|.||+|.+|.+.++.++..|.+|++.++++++......++|.. .   ..  +..+.+.     ..|+||-|+....
T Consensus         2 kI~IIGG~G~mG~slA~~L~~~G~~V~v~~r~~~~~~~~a~~~gv~-~---~~--~~~e~~~-----~aDvVIlavp~~~   70 (437)
T PRK08655          2 KISIIGGTGGLGKWFARFLKEKGFEVIVTGRDPKKGKEVAKELGVE-Y---AN--DNIDAAK-----DADIVIISVPINV   70 (437)
T ss_pred             EEEEEecCCHHHHHHHHHHHHCCCEEEEEECChHHHHHHHHHcCCe-e---cc--CHHHHhc-----cCCEEEEecCHHH
Confidence            5889998899999999999999999999998887753333266652 1   11  2222221     3677777776443


Q ss_pred             H----HHHHHhhccCCEEEEEec
Q 028523          101 L----DAVLLNMRIQGRITLCGM  119 (208)
Q Consensus       101 ~----~~~~~~l~~~G~~v~~g~  119 (208)
                      .    ......++++..++.++.
T Consensus        71 ~~~vl~~l~~~l~~~~iViDvsS   93 (437)
T PRK08655         71 TEDVIKEVAPHVKEGSLLMDVTS   93 (437)
T ss_pred             HHHHHHHHHhhCCCCCEEEEccc
Confidence            2    233334445555666554

>PRK07574 formate dehydrogenase; Provisional

Probab=97.00  E-value=0.0081  Score=47.69  Aligned_cols=90  Identities=12%  Similarity=0.043  Sum_probs=60.9

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHHHHhHCCCCccEEEeCCC
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVG   97 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~d~v~d~~g   97 (208)
                      .|.+|.|+| .|.+|...++.++.+|.+|++.+++....+... .+|...   +.   ++.+.+.     ..|+|+.+..
T Consensus       191 ~gktVGIvG-~G~IG~~vA~~l~~fG~~V~~~dr~~~~~~~~~-~~g~~~---~~---~l~ell~-----~aDvV~l~lP  257 (385)
T PRK07574        191 EGMTVGIVG-AGRIGLAVLRRLKPFDVKLHYTDRHRLPEEVEQ-ELGLTY---HV---SFDSLVS-----VCDVVTIHCP  257 (385)
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHhCCCEEEEECCCCCchhhHh-hcCcee---cC---CHHHHhh-----cCCEEEEcCC
Confidence            577899999 599999999999999999999997753333333 454321   11   3333332     3788888776


Q ss_pred             -chh-----HHHHHHhhccCCEEEEEecc
Q 028523           98 -GKM-----LDAVLLNMRIQGRITLCGMI  120 (208)
Q Consensus        98 -~~~-----~~~~~~~l~~~G~~v~~g~~  120 (208)
                       .+.     -...+..|+++..+|.++..
T Consensus       258 lt~~T~~li~~~~l~~mk~ga~lIN~aRG  286 (385)
T PRK07574        258 LHPETEHLFDADVLSRMKRGSYLVNTARG  286 (385)
T ss_pred             CCHHHHHHhCHHHHhcCCCCcEEEECCCC
Confidence             331     14567778888877777653

>COG1028 FabG Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only]

Probab=96.99  E-value=0.0054  Score=45.60  Aligned_cols=80  Identities=21%  Similarity=0.287  Sum_probs=50.8

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHH--HHHHHHhcC----CCe---eEecCC-CccHHHHHHhHCC-
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDK--VDLLKNKFG----FDE---AFNYKE-EPDLDAALKRYFP-   86 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~--~~~~~~~~g----~~~---v~~~~~-~~~~~~~~~~~~~-   86 (208)
                      .+..+||+||++++|.+.+..+...|++|+++.++.+.  .+.+.+...    ...   ..|..+ .......+.+... 
T Consensus         4 ~~~~ilITGas~GiG~aia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dvs~~~~~v~~~~~~~~~~   83 (251)
T COG1028           4 SGKVALVTGASSGIGRAIARALAREGARVVVAARRSEEEAAEALAAAIKEAGGGRAAAVAADVSDDEESVEALVAAAEEE   83 (251)
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCeEEEEcCCCchhhHHHHHHHHHhcCCCcEEEEEecCCCCHHHHHHHHHHHHHH
Confidence            56889999999999999888888999998888877543  333331222    111   245543 2123333333322 


Q ss_pred             -CCccEEEeCCC
Q 028523           87 -EGINIYFENVG   97 (208)
Q Consensus        87 -~~~d~v~d~~g   97 (208)
                       +++|+++++.|
T Consensus        84 ~g~id~lvnnAg   95 (251)
T COG1028          84 FGRIDILVNNAG   95 (251)
T ss_pred             cCCCCEEEECCC
Confidence             35999999888

>TIGR03840 TMPT_Se_Te thiopurine S-methyltransferase, Se/Te detoxification family

Probab=96.98  E-value=0.033  Score=40.57  Aligned_cols=101  Identities=15%  Similarity=0.161  Sum_probs=62.9

Q ss_pred             CCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeE------e-cCCC-cc-HHHHHHhHC--
Q 028523           17 KQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAF------N-YKEE-PD-LDAALKRYF--   85 (208)
Q Consensus        17 ~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~v~------~-~~~~-~~-~~~~~~~~~--   85 (208)
                      .++.+||+.|.  |.|.-++-+|. .|.+|++++.|+.-.+.+.++.+.....      . +... -+ ....+.+..  
T Consensus        33 ~~~~rvLd~GC--G~G~da~~LA~-~G~~V~gvD~S~~Ai~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~  109 (213)
T TIGR03840        33 PAGARVFVPLC--GKSLDLAWLAE-QGHRVLGVELSEIAVEQFFAENGLTPTVTQQGEFTRYRAGNIEIFCGDFFALTAA  109 (213)
T ss_pred             CCCCeEEEeCC--CchhHHHHHHh-CCCeEEEEeCCHHHHHHHHHHcCCCcceeccccceeeecCceEEEEccCCCCCcc
Confidence            57789999984  66888888875 6999999999999888764344432100      0 0000 00 000011111  


Q ss_pred             -CCCccEEEeCCC---------chhHHHHHHhhccCCEEEEEecc
Q 028523           86 -PEGINIYFENVG---------GKMLDAVLLNMRIQGRITLCGMI  120 (208)
Q Consensus        86 -~~~~d~v~d~~g---------~~~~~~~~~~l~~~G~~v~~g~~  120 (208)
                       .+.||.|+|+.-         ...+..+.++|+|||+++.++..
T Consensus       110 ~~~~fD~i~D~~~~~~l~~~~R~~~~~~l~~lLkpgG~~ll~~~~  154 (213)
T TIGR03840       110 DLGPVDAVYDRAALIALPEEMRQRYAAHLLALLPPGARQLLITLD  154 (213)
T ss_pred             cCCCcCEEEechhhccCCHHHHHHHHHHHHHHcCCCCeEEEEEEE
Confidence             125899999642         12577899999999987766553

Members of this family are thiopurine S-methyltransferase from a branch in which at least some member proteins can perform selenium methylation as a means to detoxify selenium, or perform a related detoxification of tellurium. Note that the EC number definition does not specify a particular thiopurine, but rather represents a class of activity.

>PRK06719 precorrin-2 dehydrogenase; Validated

Probab=96.98  E-value=0.029  Score=38.82  Aligned_cols=88  Identities=8%  Similarity=0.104  Sum_probs=55.3

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHHHHhHCCCCccEEEeCCC
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVG   97 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~d~v~d~~g   97 (208)
                      .|.+|+|.|| |.+|..-++.+...|++|+++.  ++..+.+. +++... +..+   .+.+.    .-.++|+|+-+++
T Consensus        12 ~~~~vlVvGG-G~va~rka~~Ll~~ga~V~VIs--p~~~~~l~-~l~~i~-~~~~---~~~~~----dl~~a~lViaaT~   79 (157)
T PRK06719         12 HNKVVVIIGG-GKIAYRKASGLKDTGAFVTVVS--PEICKEMK-ELPYIT-WKQK---TFSND----DIKDAHLIYAATN   79 (157)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEc--CccCHHHH-hccCcE-EEec---ccChh----cCCCceEEEECCC
Confidence            5788999997 9999988888888899988874  44444555 454211 2111   11111    0125899999999


Q ss_pred             chhHHHHHHhhccCCEEEEE
Q 028523           98 GKMLDAVLLNMRIQGRITLC  117 (208)
Q Consensus        98 ~~~~~~~~~~l~~~G~~v~~  117 (208)
                      .+..+.....++..+.++..
T Consensus        80 d~e~N~~i~~~a~~~~~vn~   99 (157)
T PRK06719         80 QHAVNMMVKQAAHDFQWVNV   99 (157)
T ss_pred             CHHHHHHHHHHHHHCCcEEE
Confidence            77666655555444434443

>PRK07502 cyclohexadienyl dehydrogenase; Validated

Probab=96.98  E-value=0.016  Score=44.73  Aligned_cols=89  Identities=15%  Similarity=0.232  Sum_probs=61.0

Q ss_pred             CEEEEecCCchHHHHHHHHHHHcCC--EEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHHHHhHCCCCccEEEeCCC
Q 028523           20 EYVFVSAASGAVGQLVGQFAKLVGC--YVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVG   97 (208)
Q Consensus        20 ~~vli~ga~g~vG~~a~qla~~~g~--~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~d~v~d~~g   97 (208)
                      .+|.|+| .|.+|...++.++..|.  +|++.++++++.+.++ +.|....+.   . +..+.+     ...|+||.|+.
T Consensus         7 ~~I~IIG-~G~mG~sla~~l~~~g~~~~V~~~dr~~~~~~~a~-~~g~~~~~~---~-~~~~~~-----~~aDvViiavp   75 (307)
T PRK07502          7 DRVALIG-IGLIGSSLARAIRRLGLAGEIVGADRSAETRARAR-ELGLGDRVT---T-SAAEAV-----KGADLVILCVP   75 (307)
T ss_pred             cEEEEEe-eCHHHHHHHHHHHhcCCCcEEEEEECCHHHHHHHH-hCCCCceec---C-CHHHHh-----cCCCEEEECCC
Confidence            5799999 59999999998888874  8999999998888887 777532111   1 222222     14899999998


Q ss_pred             chh----HHHHHHhhccCCEEEEEec
Q 028523           98 GKM----LDAVLLNMRIQGRITLCGM  119 (208)
Q Consensus        98 ~~~----~~~~~~~l~~~G~~v~~g~  119 (208)
                      ...    +......++++..++.+|.
T Consensus        76 ~~~~~~v~~~l~~~l~~~~iv~dvgs  101 (307)
T PRK07502         76 VGASGAVAAEIAPHLKPGAIVTDVGS  101 (307)
T ss_pred             HHHHHHHHHHHHhhCCCCCEEEeCcc
Confidence            543    3333345666776666655

>PRK01581 speE spermidine synthase; Validated

Probab=96.98  E-value=0.023  Score=44.54  Aligned_cols=99  Identities=9%  Similarity=0.028  Sum_probs=63.4

Q ss_pred             CCCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHhcC--------C--CeeEecCCCccHHHHHHhH
Q 028523           16 PKQGEYVFVSAASGAVGQLVGQFAKLVGC-YVVGSAGSKDKVDLLKNKFG--------F--DEAFNYKEEPDLDAALKRY   84 (208)
Q Consensus        16 ~~~g~~vli~ga~g~vG~~a~qla~~~g~-~v~~~~~s~~~~~~~~~~~g--------~--~~v~~~~~~~~~~~~~~~~   84 (208)
                      .....+|||.|+  |.|..+..++++.+. +|+++..+++-.+.++ ++.        .  +.-+..... +..+.+.. 
T Consensus       148 h~~PkrVLIIGg--GdG~tlrelLk~~~v~~It~VEIDpeVIelAr-~~~~L~~~~~~~~~DpRV~vvi~-Da~~fL~~-  222 (374)
T PRK01581        148 VIDPKRVLILGG--GDGLALREVLKYETVLHVDLVDLDGSMINMAR-NVPELVSLNKSAFFDNRVNVHVC-DAKEFLSS-  222 (374)
T ss_pred             CCCCCEEEEECC--CHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHH-hccccchhccccCCCCceEEEEC-cHHHHHHh-
Confidence            455679999994  567777777777654 9999999988888887 421        0  111111112 34444443 


Q ss_pred             CCCCccEEEeCCCc------------hhHHHHHHhhccCCEEEEEec
Q 028523           85 FPEGINIYFENVGG------------KMLDAVLLNMRIQGRITLCGM  119 (208)
Q Consensus        85 ~~~~~d~v~d~~g~------------~~~~~~~~~l~~~G~~v~~g~  119 (208)
                      ..+.+|+||--...            +.+..+.+.|+|+|.++.-..
T Consensus       223 ~~~~YDVIIvDl~DP~~~~~~~LyT~EFy~~~~~~LkPgGV~V~Qs~  269 (374)
T PRK01581        223 PSSLYDVIIIDFPDPATELLSTLYTSELFARIATFLTEDGAFVCQSN  269 (374)
T ss_pred             cCCCccEEEEcCCCccccchhhhhHHHHHHHHHHhcCCCcEEEEecC
Confidence            33479998754321            146788999999999877643

>KOG4169 consensus 15-hydroxyprostaglandin dehydrogenase and related dehydrogenases [Lipid transport and metabolism; General function prediction only]

Probab=96.96  E-value=0.0026  Score=46.09  Aligned_cols=103  Identities=18%  Similarity=0.245  Sum_probs=68.5

Q ss_pred             CCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCC----Cee--E--ecCCCccHHHHHHhHCCC--C
Q 028523           19 GEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGF----DEA--F--NYKEEPDLDAALKRYFPE--G   88 (208)
Q Consensus        19 g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~----~~v--~--~~~~~~~~~~~~~~~~~~--~   88 (208)
                      |.+++++|+.||+|+....-+...|+++.++..+.+..+... +|-+    ..+  +  |..+..+..+.+++....  .
T Consensus         5 GKna~vtggagGIGl~~sk~Ll~kgik~~~i~~~~En~~a~a-kL~ai~p~~~v~F~~~DVt~~~~~~~~f~ki~~~fg~   83 (261)
T KOG4169|consen    5 GKNALVTGGAGGIGLATSKALLEKGIKVLVIDDSEENPEAIA-KLQAINPSVSVIFIKCDVTNRGDLEAAFDKILATFGT   83 (261)
T ss_pred             CceEEEecCCchhhHHHHHHHHHcCchheeehhhhhCHHHHH-HHhccCCCceEEEEEeccccHHHHHHHHHHHHHHhCc
Confidence            889999999999999988888888999999998888765544 4432    222  2  222222444445544332  6


Q ss_pred             ccEEEeCCC-c-h-h---------------HHHHHHhhc-----cCCEEEEEecccc
Q 028523           89 INIYFENVG-G-K-M---------------LDAVLLNMR-----IQGRITLCGMISQ  122 (208)
Q Consensus        89 ~d~v~d~~g-~-~-~---------------~~~~~~~l~-----~~G~~v~~g~~~~  122 (208)
                      +|++++..| . + .               -..+++.+.     +||-++..++.-+
T Consensus        84 iDIlINgAGi~~dkd~e~Ti~vNLtgvin~T~~alpyMdk~~gG~GGiIvNmsSv~G  140 (261)
T KOG4169|consen   84 IDILINGAGILDDKDWERTINVNLTGVINGTQLALPYMDKKQGGKGGIIVNMSSVAG  140 (261)
T ss_pred             eEEEEcccccccchhHHHhhccchhhhhhhhhhhhhhhhhhcCCCCcEEEEeccccc
Confidence            899999887 2 2 1               123444443     5788998887665

>PRK11036 putative S-adenosyl-L-methionine-dependent methyltransferase; Provisional

Probab=96.96  E-value=0.03  Score=42.00  Aligned_cols=96  Identities=16%  Similarity=0.224  Sum_probs=62.0

Q ss_pred             CCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHh---cCCCeeEecCCCccHHHHHHhHCCCCccEEE
Q 028523           17 KQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNK---FGFDEAFNYKEEPDLDAALKRYFPEGINIYF   93 (208)
Q Consensus        17 ~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~---~g~~~v~~~~~~~~~~~~~~~~~~~~~d~v~   93 (208)
                      .++.+||=.|  +|.|..+..+++. |.+|++++.+++..+.+++.   .|...-+..... +..+ +.....+.||+|+
T Consensus        43 ~~~~~vLDiG--cG~G~~a~~la~~-g~~v~~vD~s~~~l~~a~~~~~~~g~~~~v~~~~~-d~~~-l~~~~~~~fD~V~  117 (255)
T PRK11036         43 PRPLRVLDAG--GGEGQTAIKLAEL-GHQVILCDLSAEMIQRAKQAAEAKGVSDNMQFIHC-AAQD-IAQHLETPVDLIL  117 (255)
T ss_pred             CCCCEEEEeC--CCchHHHHHHHHc-CCEEEEEECCHHHHHHHHHHHHhcCCccceEEEEc-CHHH-HhhhcCCCCCEEE
Confidence            4567888887  4667888888875 88999999999887777632   232211111111 2222 2222334799998


Q ss_pred             eCC-----C--chhHHHHHHhhccCCEEEEE
Q 028523           94 ENV-----G--GKMLDAVLLNMRIQGRITLC  117 (208)
Q Consensus        94 d~~-----g--~~~~~~~~~~l~~~G~~v~~  117 (208)
                      ...     .  ...+..+.+.|+|||.++.+
T Consensus       118 ~~~vl~~~~~~~~~l~~~~~~LkpgG~l~i~  148 (255)
T PRK11036        118 FHAVLEWVADPKSVLQTLWSVLRPGGALSLM  148 (255)
T ss_pred             ehhHHHhhCCHHHHHHHHHHHcCCCeEEEEE
Confidence            542     2  13578899999999999765

>PRK14982 acyl-ACP reductase; Provisional

Probab=96.95  E-value=0.011  Score=46.12  Aligned_cols=94  Identities=18%  Similarity=0.195  Sum_probs=61.8

Q ss_pred             CCCCEEEEecCCchHHHHHHHHHH-HcCC-EEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHHHHhHCCCCccEEEe
Q 028523           17 KQGEYVFVSAASGAVGQLVGQFAK-LVGC-YVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFE   94 (208)
Q Consensus        17 ~~g~~vli~ga~g~vG~~a~qla~-~~g~-~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~d~v~d   94 (208)
                      -.+.+|+|+||+|.+|..+++.+. ..|. +++.+.++.++...+.++++...+.      ++.+.+    . ..|+|+.
T Consensus       153 l~~k~VLVtGAtG~IGs~lar~L~~~~gv~~lilv~R~~~rl~~La~el~~~~i~------~l~~~l----~-~aDiVv~  221 (340)
T PRK14982        153 LSKATVAVVGATGDIGSAVCRWLDAKTGVAELLLVARQQERLQELQAELGGGKIL------SLEEAL----P-EADIVVW  221 (340)
T ss_pred             cCCCEEEEEccChHHHHHHHHHHHhhCCCCEEEEEcCCHHHHHHHHHHhccccHH------hHHHHH----c-cCCEEEE
Confidence            467899999999999998887775 4565 8999998888777766455421111      222222    1 4899999


Q ss_pred             CCCc-hhHHHHHHhhccCCEEEEEeccc
Q 028523           95 NVGG-KMLDAVLLNMRIQGRITLCGMIS  121 (208)
Q Consensus        95 ~~g~-~~~~~~~~~l~~~G~~v~~g~~~  121 (208)
                      +++. ..+..-.+.++++-.++.++.+.
T Consensus       222 ~ts~~~~~~I~~~~l~~~~~viDiAvPR  249 (340)
T PRK14982        222 VASMPKGVEIDPETLKKPCLMIDGGYPK  249 (340)
T ss_pred             CCcCCcCCcCCHHHhCCCeEEEEecCCC
Confidence            8885 33212224556666777777654

>PRK06924 short chain dehydrogenase; Provisional

Probab=96.95  E-value=0.0072  Score=44.93  Aligned_cols=41  Identities=17%  Similarity=0.323  Sum_probs=33.6

Q ss_pred             CEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCH-HHHHHHH
Q 028523           20 EYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSK-DKVDLLK   60 (208)
Q Consensus        20 ~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~-~~~~~~~   60 (208)
                      ++++|+||+|++|...++.+...|++|+++++++ ++.+.+.
T Consensus         2 k~vlItGasggiG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~   43 (251)
T PRK06924          2 RYVIITGTSQGLGEAIANQLLEKGTHVISISRTENKELTKLA   43 (251)
T ss_pred             cEEEEecCCchHHHHHHHHHHhcCCEEEEEeCCchHHHHHHH
Confidence            4799999999999999988888899999999876 4444443

>PLN02686 cinnamoyl-CoA reductase

Probab=96.95  E-value=0.0066  Score=48.07  Aligned_cols=44  Identities=14%  Similarity=0.135  Sum_probs=37.0

Q ss_pred             CCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH
Q 028523           17 KQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLK   60 (208)
Q Consensus        17 ~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~   60 (208)
                      ..+.+|||+||+|.+|..+++.+...|++|++++++.++.+.+.
T Consensus        51 ~~~k~VLVTGatGfIG~~lv~~L~~~G~~V~~~~r~~~~~~~l~   94 (367)
T PLN02686         51 AEARLVCVTGGVSFLGLAIVDRLLRHGYSVRIAVDTQEDKEKLR   94 (367)
T ss_pred             CCCCEEEEECCchHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH
Confidence            45789999999999999999999889999998887766555444

>PRK04457 spermidine synthase; Provisional

Probab=96.94  E-value=0.026  Score=42.53  Aligned_cols=96  Identities=10%  Similarity=0.125  Sum_probs=64.9

Q ss_pred             CCCCEEEEecCCchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHhcCCC---eeEecCCCccHHHHHHhHCCCCccEE
Q 028523           17 KQGEYVFVSAASGAVGQLVGQFAKLV-GCYVVGSAGSKDKVDLLKNKFGFD---EAFNYKEEPDLDAALKRYFPEGINIY   92 (208)
Q Consensus        17 ~~g~~vli~ga~g~vG~~a~qla~~~-g~~v~~~~~s~~~~~~~~~~~g~~---~v~~~~~~~~~~~~~~~~~~~~~d~v   92 (208)
                      ..+.+||+.|+  |.|..+..+++.. +.+++++..+++-.+.+++.++..   .-+..... +..+.+.+. ++.+|+|
T Consensus        65 ~~~~~vL~IG~--G~G~l~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~rv~v~~~-Da~~~l~~~-~~~yD~I  140 (262)
T PRK04457         65 PRPQHILQIGL--GGGSLAKFIYTYLPDTRQTAVEINPQVIAVARNHFELPENGERFEVIEA-DGAEYIAVH-RHSTDVI  140 (262)
T ss_pred             CCCCEEEEECC--CHhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHcCCCCCCCceEEEEC-CHHHHHHhC-CCCCCEE
Confidence            45678999995  4477888888776 469999999999888888555531   11111222 445555432 3469998


Q ss_pred             Ee-CCC----------chhHHHHHHhhccCCEEEE
Q 028523           93 FE-NVG----------GKMLDAVLLNMRIQGRITL  116 (208)
Q Consensus        93 ~d-~~g----------~~~~~~~~~~l~~~G~~v~  116 (208)
                      +- ...          .+.+..+.+.|+++|.++.
T Consensus       141 ~~D~~~~~~~~~~l~t~efl~~~~~~L~pgGvlvi  175 (262)
T PRK04457        141 LVDGFDGEGIIDALCTQPFFDDCRNALSSDGIFVV  175 (262)
T ss_pred             EEeCCCCCCCccccCcHHHHHHHHHhcCCCcEEEE
Confidence            73 221          1457889999999999876

>PRK08317 hypothetical protein; Provisional

Probab=96.93  E-value=0.014  Score=42.91  Aligned_cols=104  Identities=21%  Similarity=0.321  Sum_probs=67.2

Q ss_pred             HHhcCCCCCCEEEEecCCchHHHHHHHHHHHcC--CEEEEEeCCHHHHHHHHHhc-CCCeeEecCCCccHHHHHHhHCCC
Q 028523           11 FEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVG--CYVVGSAGSKDKVDLLKNKF-GFDEAFNYKEEPDLDAALKRYFPE   87 (208)
Q Consensus        11 ~~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g--~~v~~~~~s~~~~~~~~~~~-g~~~v~~~~~~~~~~~~~~~~~~~   87 (208)
                      .+...+.++++||-.|+ | .|..+..+++..+  .++++++.+++..+.+++.. .....+..... +...  .....+
T Consensus        12 ~~~~~~~~~~~vLdiG~-G-~G~~~~~~a~~~~~~~~v~~~d~~~~~~~~a~~~~~~~~~~~~~~~~-d~~~--~~~~~~   86 (241)
T PRK08317         12 FELLAVQPGDRVLDVGC-G-PGNDARELARRVGPEGRVVGIDRSEAMLALAKERAAGLGPNVEFVRG-DADG--LPFPDG   86 (241)
T ss_pred             HHHcCCCCCCEEEEeCC-C-CCHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHhhCCCCceEEEec-cccc--CCCCCC
Confidence            35577889999999985 3 4888889998773  59999999998888777321 11111111111 1111  011223


Q ss_pred             CccEEEeCC-----C--chhHHHHHHhhccCCEEEEEec
Q 028523           88 GINIYFENV-----G--GKMLDAVLLNMRIQGRITLCGM  119 (208)
Q Consensus        88 ~~d~v~d~~-----g--~~~~~~~~~~l~~~G~~v~~g~  119 (208)
                      .+|+|+...     .  ...+..+.++|++||.++....
T Consensus        87 ~~D~v~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~  125 (241)
T PRK08317         87 SFDAVRSDRVLQHLEDPARALAEIARVLRPGGRVVVLDT  125 (241)
T ss_pred             CceEEEEechhhccCCHHHHHHHHHHHhcCCcEEEEEec
Confidence            689887532     2  2367889999999999987653

>COG2227 UbiG 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase [Coenzyme metabolism]

Probab=96.93  E-value=0.013  Score=42.89  Aligned_cols=93  Identities=18%  Similarity=0.249  Sum_probs=60.3

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCe--eEecCCCccHHHHHHhHCCCCccEEEeC
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDE--AFNYKEEPDLDAALKRYFPEGINIYFEN   95 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~--v~~~~~~~~~~~~~~~~~~~~~d~v~d~   95 (208)
                      +|.+||=.|+.|  |+.. +-...+|++|++++.+++..+.++ ......  -++|... .. +.+... ++.||+|++-
T Consensus        59 ~g~~vLDvGCGg--G~Ls-e~mAr~Ga~VtgiD~se~~I~~Ak-~ha~e~gv~i~y~~~-~~-edl~~~-~~~FDvV~cm  131 (243)
T COG2227          59 PGLRVLDVGCGG--GILS-EPLARLGASVTGIDASEKPIEVAK-LHALESGVNIDYRQA-TV-EDLASA-GGQFDVVTCM  131 (243)
T ss_pred             CCCeEEEecCCc--cHhh-HHHHHCCCeeEEecCChHHHHHHH-Hhhhhccccccchhh-hH-HHHHhc-CCCccEEEEh
Confidence            788899888655  4433 444456799999999999888887 322211  2556543 22 222221 1479999752


Q ss_pred             -----CC--chhHHHHHHhhccCCEEEEE
Q 028523           96 -----VG--GKMLDAVLLNMRIQGRITLC  117 (208)
Q Consensus        96 -----~g--~~~~~~~~~~l~~~G~~v~~  117 (208)
                           +.  ...+..+.++++|+|.+...
T Consensus       132 EVlEHv~dp~~~~~~c~~lvkP~G~lf~S  160 (243)
T COG2227         132 EVLEHVPDPESFLRACAKLVKPGGILFLS  160 (243)
T ss_pred             hHHHccCCHHHHHHHHHHHcCCCcEEEEe
Confidence                 33  23678899999999998654

>PRK14967 putative methyltransferase; Provisional

Probab=96.92  E-value=0.02  Score=41.97  Aligned_cols=96  Identities=20%  Similarity=0.127  Sum_probs=62.5

Q ss_pred             cCCCCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHH---hcCCCe-eEecCCCccHHHHHHhHCCCC
Q 028523           14 CSPKQGEYVFVSAASGAVGQLVGQFAKLVGC-YVVGSAGSKDKVDLLKN---KFGFDE-AFNYKEEPDLDAALKRYFPEG   88 (208)
Q Consensus        14 ~~~~~g~~vli~ga~g~vG~~a~qla~~~g~-~v~~~~~s~~~~~~~~~---~~g~~~-v~~~~~~~~~~~~~~~~~~~~   88 (208)
                      ..++++++||-.|+ |. |..++.+++. +. ++++++.++...+.+++   ..+... ++.   . ++.+.+   ..+.
T Consensus        32 ~~~~~~~~vLDlGc-G~-G~~~~~la~~-~~~~v~~vD~s~~~l~~a~~n~~~~~~~~~~~~---~-d~~~~~---~~~~  101 (223)
T PRK14967         32 EGLGPGRRVLDLCT-GS-GALAVAAAAA-GAGSVTAVDISRRAVRSARLNALLAGVDVDVRR---G-DWARAV---EFRP  101 (223)
T ss_pred             cccCCCCeEEEecC-CH-HHHHHHHHHc-CCCeEEEEECCHHHHHHHHHHHHHhCCeeEEEE---C-chhhhc---cCCC
Confidence            45788899999984 44 8888888875 56 99999999887766553   233322 222   2 333221   2237


Q ss_pred             ccEEEeCCC-c---------------------------hhHHHHHHhhccCCEEEEEec
Q 028523           89 INIYFENVG-G---------------------------KMLDAVLLNMRIQGRITLCGM  119 (208)
Q Consensus        89 ~d~v~d~~g-~---------------------------~~~~~~~~~l~~~G~~v~~g~  119 (208)
                      ||+|+...+ .                           ..+..+.+.|++||+++.+..
T Consensus       102 fD~Vi~npPy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~Lk~gG~l~~~~~  160 (223)
T PRK14967        102 FDVVVSNPPYVPAPPDAPPSRGPARAWDAGPDGRAVLDRLCDAAPALLAPGGSLLLVQS  160 (223)
T ss_pred             eeEEEECCCCCCCCcccccccChhHhhhCCCcHHHHHHHHHHHHHHhcCCCcEEEEEEe
Confidence            999987532 0                           124567889999999887633

>TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase

Probab=96.92  E-value=0.0051  Score=45.23  Aligned_cols=77  Identities=18%  Similarity=0.264  Sum_probs=47.5

Q ss_pred             EEEecCCchHHHHHHHHHHHcCCEEEEEeCCH-HHHHHHHH---hcCCC---eeEecCCCccHHHHHHhHCC--CCccEE
Q 028523           22 VFVSAASGAVGQLVGQFAKLVGCYVVGSAGSK-DKVDLLKN---KFGFD---EAFNYKEEPDLDAALKRYFP--EGINIY   92 (208)
Q Consensus        22 vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~-~~~~~~~~---~~g~~---~v~~~~~~~~~~~~~~~~~~--~~~d~v   92 (208)
                      +||+|++|++|...++.+...|++|++++++. ++.+...+   ..|..   ...|..+...+.+.+.....  +++|.+
T Consensus         1 vlItG~~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~v   80 (239)
T TIGR01830         1 ALVTGASRGIGRAIALKLAKEGAKVIITYRSSEEGAEEVVEELKAYGVKALGVVCDVSDREDVKAVVEEIEEELGPIDIL   80 (239)
T ss_pred             CEEECCCcHHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHhCCCCEE
Confidence            58999999999999988888899999998764 33222211   33432   13344443122232322211  268999


Q ss_pred             EeCCCc
Q 028523           93 FENVGG   98 (208)
Q Consensus        93 ~d~~g~   98 (208)
                      +.+.|.
T Consensus        81 i~~ag~   86 (239)
T TIGR01830        81 VNNAGI   86 (239)
T ss_pred             EECCCC
Confidence            998873

This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis.

>PF13659 Methyltransf_26: Methyltransferase domain; PDB: 3GJY_A 3LPM_B 2NP6_D 1AQI_B 2ADM_B 2IH2_A 2JG3_A 2IBS_D 2NP7_A 2IBT_A

Probab=96.92  E-value=0.011  Score=38.43  Aligned_cols=96  Identities=16%  Similarity=0.204  Sum_probs=59.4

Q ss_pred             CCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhc---CCCeeEecCCCccHHHHHHhHCCCCccEEEeC
Q 028523           19 GEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKF---GFDEAFNYKEEPDLDAALKRYFPEGINIYFEN   95 (208)
Q Consensus        19 g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~---g~~~v~~~~~~~~~~~~~~~~~~~~~d~v~d~   95 (208)
                      |.+|+-.|  .|.|...+.+++....++++++.++...+.++..+   +.+.-+..... ++.+.......+.+|+|+-.
T Consensus         1 g~~vlD~~--~G~G~~~~~~~~~~~~~~~gvdi~~~~~~~a~~~~~~~~~~~~~~~~~~-D~~~~~~~~~~~~~D~Iv~n   77 (117)
T PF13659_consen    1 GDRVLDPG--CGSGTFLLAALRRGAARVTGVDIDPEAVELARRNLPRNGLDDRVEVIVG-DARDLPEPLPDGKFDLIVTN   77 (117)
T ss_dssp             TEEEEEET--STTCHHHHHHHHHCTCEEEEEESSHHHHHHHHHHCHHCTTTTTEEEEES-HHHHHHHTCTTT-EEEEEE-
T ss_pred             CCEEEEcC--cchHHHHHHHHHHCCCeEEEEEECHHHHHHHHHHHHHccCCceEEEEEC-chhhchhhccCceeEEEEEC
Confidence            46677666  34566666666555579999999999888777433   22211222223 55444433444589999875


Q ss_pred             CC-ch--------------hHHHHHHhhccCCEEEEE
Q 028523           96 VG-GK--------------MLDAVLLNMRIQGRITLC  117 (208)
Q Consensus        96 ~g-~~--------------~~~~~~~~l~~~G~~v~~  117 (208)
                      .. ..              .+..+.+.|+++|.++.+
T Consensus        78 pP~~~~~~~~~~~~~~~~~~~~~~~~~L~~gG~~~~~  114 (117)
T PF13659_consen   78 PPYGPRSGDKAALRRLYSRFLEAAARLLKPGGVLVFI  114 (117)
T ss_dssp             -STTSBTT----GGCHHHHHHHHHHHHEEEEEEEEEE
T ss_pred             CCCccccccchhhHHHHHHHHHHHHHHcCCCeEEEEE
Confidence            43 11              267899999999998775

...

>PLN02653 GDP-mannose 4,6-dehydratase

Probab=96.91  E-value=0.0035  Score=48.98  Aligned_cols=37  Identities=16%  Similarity=0.250  Sum_probs=32.7

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHH
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKD   54 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~   54 (208)
                      ++.+|||+||+|.+|...++.+...|.+|++++++++
T Consensus         5 ~~~~vlVTGatGfiG~~l~~~L~~~G~~V~~~~r~~~   41 (340)
T PLN02653          5 PRKVALITGITGQDGSYLTEFLLSKGYEVHGIIRRSS   41 (340)
T ss_pred             CCCEEEEECCCCccHHHHHHHHHHCCCEEEEEecccc
Confidence            4678999999999999999999999999999887643

>COG0373 HemA Glutamyl-tRNA reductase [Coenzyme metabolism]

Probab=96.91  E-value=0.034  Score=44.40  Aligned_cols=94  Identities=20%  Similarity=0.262  Sum_probs=64.3

Q ss_pred             CCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHHHHhHCCCCccEEEeC
Q 028523           17 KQGEYVFVSAASGAVGQLVGQFAKLVGC-YVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFEN   95 (208)
Q Consensus        17 ~~g~~vli~ga~g~vG~~a~qla~~~g~-~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~d~v~d~   95 (208)
                      -++.++||.|+ |-+|..++.-+...|. +|++.-|+.++.+.+.+++|+ .++.++   +..+.+.     .+|+||-+
T Consensus       176 L~~~~vlvIGA-Gem~~lva~~L~~~g~~~i~IaNRT~erA~~La~~~~~-~~~~l~---el~~~l~-----~~DvViss  245 (414)
T COG0373         176 LKDKKVLVIGA-GEMGELVAKHLAEKGVKKITIANRTLERAEELAKKLGA-EAVALE---ELLEALA-----EADVVISS  245 (414)
T ss_pred             cccCeEEEEcc-cHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHhCC-eeecHH---HHHHhhh-----hCCEEEEe
Confidence            36788999997 9899988888888887 899999999998877779995 333332   2233332     38999999


Q ss_pred             CCchh----HHHHHHhhccC-C-EEEEEecc
Q 028523           96 VGGKM----LDAVLLNMRIQ-G-RITLCGMI  120 (208)
Q Consensus        96 ~g~~~----~~~~~~~l~~~-G-~~v~~g~~  120 (208)
                      ++++.    -....+.+++. . -++.++.+
T Consensus       246 Tsa~~~ii~~~~ve~a~~~r~~~livDiavP  276 (414)
T COG0373         246 TSAPHPIITREMVERALKIRKRLLIVDIAVP  276 (414)
T ss_pred             cCCCccccCHHHHHHHHhcccCeEEEEecCC
Confidence            98652    23344444443 2 35555554

>KOG1199 consensus Short-chain alcohol dehydrogenase/3-hydroxyacyl-CoA dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=96.90  E-value=0.0058  Score=42.35  Aligned_cols=83  Identities=18%  Similarity=0.205  Sum_probs=59.7

Q ss_pred             CCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHH-HHHHHhcCCCeeEecCCC---ccHHHHHHhHCCC--C
Q 028523           15 SPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKV-DLLKNKFGFDEAFNYKEE---PDLDAALKRYFPE--G   88 (208)
Q Consensus        15 ~~~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~-~~~~~~~g~~~v~~~~~~---~~~~~~~~~~~~~--~   88 (208)
                      +-.+|-.-||+|+.+++|.+++..+...|+.|+..+-...+- +.++ ++|-.-++.+.+-   .+....+......  .
T Consensus         5 rs~kglvalvtggasglg~ataerlakqgasv~lldlp~skg~~vak-elg~~~vf~padvtsekdv~aala~ak~kfgr   83 (260)
T KOG1199|consen    5 RSTKGLVALVTGGASGLGKATAERLAKQGASVALLDLPQSKGADVAK-ELGGKVVFTPADVTSEKDVRAALAKAKAKFGR   83 (260)
T ss_pred             hhhcCeeEEeecCcccccHHHHHHHHhcCceEEEEeCCcccchHHHH-HhCCceEEeccccCcHHHHHHHHHHHHhhccc
Confidence            344667789999999999999999999999988888666654 4555 8987666654432   1444444443333  6


Q ss_pred             ccEEEeCCCc
Q 028523           89 INIYFENVGG   98 (208)
Q Consensus        89 ~d~v~d~~g~   98 (208)
                      .|..++|.|-
T Consensus        84 ld~~vncagi   93 (260)
T KOG1199|consen   84 LDALVNCAGI   93 (260)
T ss_pred             eeeeeeccce
Confidence            8999999984

>PLN00203 glutamyl-tRNA reductase

Probab=96.89  E-value=0.013  Score=48.44  Aligned_cols=72  Identities=22%  Similarity=0.307  Sum_probs=52.1

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHhcCCCe--eEecCCCccHHHHHHhHCCCCccEEEe
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGC-YVVGSAGSKDKVDLLKNKFGFDE--AFNYKEEPDLDAALKRYFPEGINIYFE   94 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~-~v~~~~~s~~~~~~~~~~~g~~~--v~~~~~~~~~~~~~~~~~~~~~d~v~d   94 (208)
                      .+.+|+|+|+ |.+|.++++.+...|+ +|+++.++.++.+.+.++++...  +.++.   +..+.+.     ..|+||.
T Consensus       265 ~~kkVlVIGA-G~mG~~~a~~L~~~G~~~V~V~nRs~era~~La~~~~g~~i~~~~~~---dl~~al~-----~aDVVIs  335 (519)
T PLN00203        265 ASARVLVIGA-GKMGKLLVKHLVSKGCTKMVVVNRSEERVAALREEFPDVEIIYKPLD---EMLACAA-----EADVVFT  335 (519)
T ss_pred             CCCEEEEEeC-HHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHhCCCceEeecHh---hHHHHHh-----cCCEEEE
Confidence            3688999996 9999999999988998 89999999998877775664211  11111   2222222     4899999


Q ss_pred             CCCc
Q 028523           95 NVGG   98 (208)
Q Consensus        95 ~~g~   98 (208)
                      |++.
T Consensus       336 AT~s  339 (519)
T PLN00203        336 STSS  339 (519)
T ss_pred             ccCC
Confidence            9884

>PRK00312 pcm protein-L-isoaspartate O-methyltransferase; Reviewed

Probab=96.87  E-value=0.011  Score=42.99  Aligned_cols=101  Identities=16%  Similarity=0.094  Sum_probs=62.5

Q ss_pred             HhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHh---cCCCeeEecCCCccHHHHHHhHCCCC
Q 028523           12 EVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNK---FGFDEAFNYKEEPDLDAALKRYFPEG   88 (208)
Q Consensus        12 ~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~---~g~~~v~~~~~~~~~~~~~~~~~~~~   88 (208)
                      ....++++++||-.|+  |.|..+..+++.. .+|+.++.+++-.+.+++.   +|...+ +.... +..+.+.  ..+.
T Consensus        72 ~~l~~~~~~~VLeiG~--GsG~~t~~la~~~-~~v~~vd~~~~~~~~a~~~~~~~~~~~v-~~~~~-d~~~~~~--~~~~  144 (212)
T PRK00312         72 ELLELKPGDRVLEIGT--GSGYQAAVLAHLV-RRVFSVERIKTLQWEAKRRLKQLGLHNV-SVRHG-DGWKGWP--AYAP  144 (212)
T ss_pred             HhcCCCCCCEEEEECC--CccHHHHHHHHHh-CEEEEEeCCHHHHHHHHHHHHHCCCCce-EEEEC-CcccCCC--cCCC
Confidence            4567889999999984  4466666566554 4899999888876666543   344321 11111 1111110  1136


Q ss_pred             ccEEEeCCC-chhHHHHHHhhccCCEEEEEec
Q 028523           89 INIYFENVG-GKMLDAVLLNMRIQGRITLCGM  119 (208)
Q Consensus        89 ~d~v~d~~g-~~~~~~~~~~l~~~G~~v~~g~  119 (208)
                      ||+|+.... ........+.|++||+++..-.
T Consensus       145 fD~I~~~~~~~~~~~~l~~~L~~gG~lv~~~~  176 (212)
T PRK00312        145 FDRILVTAAAPEIPRALLEQLKEGGILVAPVG  176 (212)
T ss_pred             cCEEEEccCchhhhHHHHHhcCCCcEEEEEEc
Confidence            999887555 3456677889999999876533

>PRK12749 quinate/shikimate dehydrogenase; Reviewed

Probab=96.86  E-value=0.016  Score=44.34  Aligned_cols=77  Identities=12%  Similarity=0.110  Sum_probs=45.8

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCH---HHHHHHHHhcCCC--eeEecCCCccHHHHHHhHCCCCccE
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGC-YVVGSAGSK---DKVDLLKNKFGFD--EAFNYKEEPDLDAALKRYFPEGINI   91 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~-~v~~~~~s~---~~~~~~~~~~g~~--~v~~~~~~~~~~~~~~~~~~~~~d~   91 (208)
                      ++.+++|+|+ ||.+.+++..+...|+ +++++.|++   ++.+.+.+.++..  ..+...+. +-...+.+. ...+|+
T Consensus       123 ~~k~vlvlGa-GGaarAi~~~l~~~g~~~i~i~nRt~~~~~ka~~la~~~~~~~~~~~~~~~~-~~~~~l~~~-~~~aDi  199 (288)
T PRK12749        123 KGKTMVLLGA-GGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVNENTDCVVTVTDL-ADQQAFAEA-LASADI  199 (288)
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCccHHHHHHHHHHHhhhccCceEEEech-hhhhhhhhh-cccCCE
Confidence            5679999996 8889887776667888 899999884   3555454355421  11111111 101112111 125899


Q ss_pred             EEeCCC
Q 028523           92 YFENVG   97 (208)
Q Consensus        92 v~d~~g   97 (208)
                      |++|+.
T Consensus       200 vINaTp  205 (288)
T PRK12749        200 LTNGTK  205 (288)
T ss_pred             EEECCC
Confidence            999886

>cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase

Probab=96.85  E-value=0.024  Score=39.64  Aligned_cols=78  Identities=18%  Similarity=0.112  Sum_probs=52.8

Q ss_pred             CCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHHHHhHCCCCccEEEeCC
Q 028523           17 KQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENV   96 (208)
Q Consensus        17 ~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~d~v~d~~   96 (208)
                      -.|.+++|.|++..+|..+++.++..|++|+++.++.+                     +..+.+.     .+|+||.++
T Consensus        42 l~gk~vlViG~G~~~G~~~a~~L~~~g~~V~v~~r~~~---------------------~l~~~l~-----~aDiVIsat   95 (168)
T cd01080          42 LAGKKVVVVGRSNIVGKPLAALLLNRNATVTVCHSKTK---------------------NLKEHTK-----QADIVIVAV   95 (168)
T ss_pred             CCCCEEEEECCcHHHHHHHHHHHhhCCCEEEEEECCch---------------------hHHHHHh-----hCCEEEEcC
Confidence            47899999997334699899999989999888886532                     2222222     278999988


Q ss_pred             CchhHHHHHHhhccCCEEEEEeccc
Q 028523           97 GGKMLDAVLLNMRIQGRITLCGMIS  121 (208)
Q Consensus        97 g~~~~~~~~~~l~~~G~~v~~g~~~  121 (208)
                      +.+.+ --.+.++++-.++.++.+.
T Consensus        96 ~~~~i-i~~~~~~~~~viIDla~pr  119 (168)
T cd01080          96 GKPGL-VKGDMVKPGAVVIDVGINR  119 (168)
T ss_pred             CCCce-ecHHHccCCeEEEEccCCC
Confidence            86432 2223466666677776643

NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a

>PF13241 NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_B 1PJT_A 1PJS_A 1PJQ_A 1KYQ_B

Probab=96.84  E-value=0.0024  Score=40.79  Aligned_cols=88  Identities=16%  Similarity=0.258  Sum_probs=56.0

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHHHHhHCCCCccEEEeCCC
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVG   97 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~d~v~d~~g   97 (208)
                      +|.+|||.|+ |.+|..-++.+...|++|++++...   +..+   +.-..   ... .+.+.    . .++|+||.+++
T Consensus         6 ~~~~vlVvGg-G~va~~k~~~Ll~~gA~v~vis~~~---~~~~---~~i~~---~~~-~~~~~----l-~~~~lV~~at~   69 (103)
T PF13241_consen    6 KGKRVLVVGG-GPVAARKARLLLEAGAKVTVISPEI---EFSE---GLIQL---IRR-EFEED----L-DGADLVFAATD   69 (103)
T ss_dssp             TT-EEEEEEE-SHHHHHHHHHHCCCTBEEEEEESSE---HHHH---TSCEE---EES-S-GGG----C-TTESEEEE-SS
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCEEEEECCch---hhhh---hHHHH---Hhh-hHHHH----H-hhheEEEecCC
Confidence            5788999996 9999999999999999999999765   2222   11111   111 33111    1 25999999998


Q ss_pred             chhH-HHHHHhhccCCEEEEEeccc
Q 028523           98 GKML-DAVLLNMRIQGRITLCGMIS  121 (208)
Q Consensus        98 ~~~~-~~~~~~l~~~G~~v~~g~~~  121 (208)
                      .+.+ ....+..+.-|.++.+...+
T Consensus        70 d~~~n~~i~~~a~~~~i~vn~~D~p   94 (103)
T PF13241_consen   70 DPELNEAIYADARARGILVNVVDDP   94 (103)
T ss_dssp             -HHHHHHHHHHHHHTTSEEEETT-C
T ss_pred             CHHHHHHHHHHHhhCCEEEEECCCc
Confidence            6544 45555556688888876643

>PLN02928 oxidoreductase family protein

Probab=96.84  E-value=0.012  Score=46.15  Aligned_cols=96  Identities=16%  Similarity=0.114  Sum_probs=62.1

Q ss_pred             CCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCC-----CeeEe-cCCCccHHHHHHhHCCCCcc
Q 028523           17 KQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGF-----DEAFN-YKEEPDLDAALKRYFPEGIN   90 (208)
Q Consensus        17 ~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~-----~~v~~-~~~~~~~~~~~~~~~~~~~d   90 (208)
                      -.|.++.|+| .|.+|...++.++.+|.+|++..++..+... . .++.     ....+ .....++.+.+.+     .|
T Consensus       157 l~gktvGIiG-~G~IG~~vA~~l~afG~~V~~~dr~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~L~ell~~-----aD  228 (347)
T PLN02928        157 LFGKTVFILG-YGAIGIELAKRLRPFGVKLLATRRSWTSEPE-D-GLLIPNGDVDDLVDEKGGHEDIYEFAGE-----AD  228 (347)
T ss_pred             CCCCEEEEEC-CCHHHHHHHHHHhhCCCEEEEECCCCChhhh-h-hhccccccccccccccCcccCHHHHHhh-----CC
Confidence            3578999999 5999999999999999999999876332111 1 1110     00000 0011144444443     79


Q ss_pred             EEEeCCC-ch-----hHHHHHHhhccCCEEEEEecc
Q 028523           91 IYFENVG-GK-----MLDAVLLNMRIQGRITLCGMI  120 (208)
Q Consensus        91 ~v~d~~g-~~-----~~~~~~~~l~~~G~~v~~g~~  120 (208)
                      +|+.++. .+     .-...+..|+++..+|.++..
T Consensus       229 iVvl~lPlt~~T~~li~~~~l~~Mk~ga~lINvaRG  264 (347)
T PLN02928        229 IVVLCCTLTKETAGIVNDEFLSSMKKGALLVNIARG  264 (347)
T ss_pred             EEEECCCCChHhhcccCHHHHhcCCCCeEEEECCCc
Confidence            9998876 22     235778889999988888753

>PF10727 Rossmann-like: Rossmann-like domain; InterPro: IPR019665 This entry represents an NAD/NADP-binding domain with a core Rossmann-type fold, found in an uncharacterised protein family thought to be putative NADP oxidoreductase coenzyme F420-dependent proteins and/or NAD-dependent glycerol-3-phosphate dehydrogenase-like proteins

Probab=96.84  E-value=0.0057  Score=40.62  Aligned_cols=81  Identities=17%  Similarity=0.178  Sum_probs=51.3

Q ss_pred             CCEEEEecCCchHHHHHHHHHHHcCCEEEEEe-CCHHHHHHHHHhcCCCeeEecCCCccHHHHHHhHCCCCccEEEeCCC
Q 028523           19 GEYVFVSAASGAVGQLVGQFAKLVGCYVVGSA-GSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVG   97 (208)
Q Consensus        19 g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~-~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~d~v~d~~g   97 (208)
                      .-+|-|+|+ |-+|..+...++..|.+|..+. ++.++.+.+.+.++...+.+..+          .. ...|++|-++.
T Consensus        10 ~l~I~iIGa-GrVG~~La~aL~~ag~~v~~v~srs~~sa~~a~~~~~~~~~~~~~~----------~~-~~aDlv~iavp   77 (127)
T PF10727_consen   10 RLKIGIIGA-GRVGTALARALARAGHEVVGVYSRSPASAERAAAFIGAGAILDLEE----------IL-RDADLVFIAVP   77 (127)
T ss_dssp             --EEEEECT-SCCCCHHHHHHHHTTSEEEEESSCHH-HHHHHHC--TT-----TTG----------GG-CC-SEEEE-S-
T ss_pred             ccEEEEECC-CHHHHHHHHHHHHCCCeEEEEEeCCccccccccccccccccccccc----------cc-ccCCEEEEEec
Confidence            347889996 9999999999999999988775 55556677764455433433221          11 14899999999


Q ss_pred             chhHHHHHHhhccC
Q 028523           98 GKMLDAVLLNMRIQ  111 (208)
Q Consensus        98 ~~~~~~~~~~l~~~  111 (208)
                      .+.+...++.|...
T Consensus        78 DdaI~~va~~La~~   91 (127)
T PF10727_consen   78 DDAIAEVAEQLAQY   91 (127)
T ss_dssp             CCHHHHHHHHHHCC
T ss_pred             hHHHHHHHHHHHHh
Confidence            88888888877654

This Rossmann-fold domain consists of 3-layers alpha/beta/alpha, where the six beta strands are parallel in the order 321456.; PDB: 3DFU_A 3C24_A.

>TIGR01831 fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductase, putative

Probab=96.83  E-value=0.0066  Score=44.76  Aligned_cols=76  Identities=16%  Similarity=0.142  Sum_probs=46.5

Q ss_pred             EEEecCCchHHHHHHHHHHHcCCEEEEEeCCH-HHHHHHHH---hcCCC-e--eEecCCCccHHHHHHhHC--CCCccEE
Q 028523           22 VFVSAASGAVGQLVGQFAKLVGCYVVGSAGSK-DKVDLLKN---KFGFD-E--AFNYKEEPDLDAALKRYF--PEGINIY   92 (208)
Q Consensus        22 vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~-~~~~~~~~---~~g~~-~--v~~~~~~~~~~~~~~~~~--~~~~d~v   92 (208)
                      ++|+||+|++|...++.+...|++|++++++. ++.+.+.+   +.+.. .  ..|..+.......+.+..  .+++|.+
T Consensus         1 vlItGas~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i~~l   80 (239)
T TIGR01831         1 VLVTGASRGIGRAIANRLAADGFEICVHYHSGRSDAESVVSAIQAQGGNARLLQFDVADRVACRTLLEADIAEHGAYYGV   80 (239)
T ss_pred             CEEeCCCchHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            58999999999999999888999999888653 33332221   22322 1  234443323333333221  1368899


Q ss_pred             EeCCC
Q 028523           93 FENVG   97 (208)
Q Consensus        93 ~d~~g   97 (208)
                      +.+.|
T Consensus        81 i~~ag   85 (239)
T TIGR01831        81 VLNAG   85 (239)
T ss_pred             EECCC
Confidence            88776

This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found.

>TIGR00715 precor6x_red precorrin-6x reductase

Probab=96.83  E-value=0.0047  Score=46.25  Aligned_cols=73  Identities=10%  Similarity=0.088  Sum_probs=50.6

Q ss_pred             EEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHHHHhHCCC-CccEEEeCCCc
Q 028523           21 YVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPE-GINIYFENVGG   98 (208)
Q Consensus        21 ~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~-~~d~v~d~~g~   98 (208)
                      +|||+||+|- |..++..+...|.+|+++++++...+.+. ..|...+....-  +-.+ +.++... ++|+|+|++..
T Consensus         2 ~ILvlGGT~e-gr~la~~L~~~g~~v~~s~~t~~~~~~~~-~~g~~~v~~g~l--~~~~-l~~~l~~~~i~~VIDAtHP   75 (256)
T TIGR00715         2 TVLLMGGTVD-SRAIAKGLIAQGIEILVTVTTSEGKHLYP-IHQALTVHTGAL--DPQE-LREFLKRHSIDILVDATHP   75 (256)
T ss_pred             eEEEEechHH-HHHHHHHHHhCCCeEEEEEccCCcccccc-ccCCceEEECCC--CHHH-HHHHHHhcCCCEEEEcCCH
Confidence            6999998775 98888777778999999998988777666 555444432221  2222 4333333 79999998863

This enzyme was found to be a monomer by gel filtration.

>TIGR01472 gmd GDP-mannose 4,6-dehydratase

Probab=96.82  E-value=0.0067  Score=47.46  Aligned_cols=35  Identities=17%  Similarity=0.285  Sum_probs=31.3

Q ss_pred             CEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHH
Q 028523           20 EYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKD   54 (208)
Q Consensus        20 ~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~   54 (208)
                      .+|||+||+|.+|..+++.+...|.+|++++++.+
T Consensus         1 ~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~   35 (343)
T TIGR01472         1 KIALITGITGQDGSYLAEFLLEKGYEVHGLIRRSS   35 (343)
T ss_pred             CeEEEEcCCCcHHHHHHHHHHHCCCEEEEEecCCc
Confidence            37999999999999999999989999999987753

Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116).

>PRK06849 hypothetical protein; Provisional

Probab=96.82  E-value=0.017  Score=46.15  Aligned_cols=95  Identities=11%  Similarity=0.108  Sum_probs=60.9

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCe--eEecC--CCccHHHHHHhHCCC-CccEE
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDE--AFNYK--EEPDLDAALKRYFPE-GINIY   92 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~--v~~~~--~~~~~~~~~~~~~~~-~~d~v   92 (208)
                      ...+|||+|+..++|+..++.++..|.+|++++..+....... . .++.  .++..  +.+.+.+.+.++... ++|++
T Consensus         3 ~~~~VLI~G~~~~~~l~iar~l~~~G~~Vi~~d~~~~~~~~~s-~-~~d~~~~~p~p~~d~~~~~~~L~~i~~~~~id~v   80 (389)
T PRK06849          3 TKKTVLITGARAPAALELARLFHNAGHTVILADSLKYPLSRFS-R-AVDGFYTIPSPRWDPDAYIQALLSIVQRENIDLL   80 (389)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHH-H-hhhheEEeCCCCCCHHHHHHHHHHHHHHcCCCEE
Confidence            4578999999888999999999999999999997765433222 1 1222  22211  111466666666555 79999


Q ss_pred             EeCCCch-hHHHHHHhhccCCEE
Q 028523           93 FENVGGK-MLDAVLLNMRIQGRI  114 (208)
Q Consensus        93 ~d~~g~~-~~~~~~~~l~~~G~~  114 (208)
                      +-+.... ......+.+.+..++
T Consensus        81 IP~~e~~~~~a~~~~~l~~~~~v  103 (389)
T PRK06849         81 IPTCEEVFYLSHAKEELSAYCEV  103 (389)
T ss_pred             EECChHHHhHHhhhhhhcCCcEE
Confidence            9877632 233344556555443

>PF08659 KR: KR domain; InterPro: IPR013968 This domain is found in bacterial polyketide synthases that catalyse the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain

Probab=96.80  E-value=0.011  Score=41.87  Aligned_cols=76  Identities=16%  Similarity=0.194  Sum_probs=43.1

Q ss_pred             EEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCHH-------HHHHHHHhcCCCe---eEecCCCccHHHHHHhHCC--C
Q 028523           21 YVFVSAASGAVGQLVGQFAKLVGC-YVVGSAGSKD-------KVDLLKNKFGFDE---AFNYKEEPDLDAALKRYFP--E   87 (208)
Q Consensus        21 ~vli~ga~g~vG~~a~qla~~~g~-~v~~~~~s~~-------~~~~~~~~~g~~~---v~~~~~~~~~~~~~~~~~~--~   87 (208)
                      ++||+||.|++|+..++.+...+. +++.+.++..       ..+.++ +.|..-   -.|..+...+.+.+.+...  +
T Consensus         2 tylitGG~gglg~~la~~La~~~~~~~il~~r~~~~~~~~~~~i~~l~-~~g~~v~~~~~Dv~d~~~v~~~~~~~~~~~~   80 (181)
T PF08659_consen    2 TYLITGGLGGLGQSLARWLAERGARRLILLGRSGAPSAEAEAAIRELE-SAGARVEYVQCDVTDPEAVAAALAQLRQRFG   80 (181)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTT-SEEEEEESSGGGSTTHHHHHHHHH-HTT-EEEEEE--TTSHHHHHHHHHTSHTTSS
T ss_pred             EEEEECCccHHHHHHHHHHHHcCCCEEEEeccCCCccHHHHHHHHHHH-hCCCceeeeccCccCHHHHHHHHHHHHhccC
Confidence            689999999999999888877766 9999998821       233444 445532   1233333233333333322  2


Q ss_pred             CccEEEeCCC
Q 028523           88 GINIYFENVG   97 (208)
Q Consensus        88 ~~d~v~d~~g   97 (208)
                      +++-||.+.|
T Consensus        81 ~i~gVih~ag   90 (181)
T PF08659_consen   81 PIDGVIHAAG   90 (181)
T ss_dssp             -EEEEEE---
T ss_pred             Ccceeeeeee
Confidence            5777777766

It uses NADPH to reduce the keto group to a hydroxy group. ; PDB: 3QP9_D 2FR0_A 2FR1_A 2Z5L_A 3SLK_B 3MJE_B 3MJC_A 3MJT_B 3MJV_A 3MJS_B ....

>PLN02214 cinnamoyl-CoA reductase

Probab=96.79  E-value=0.015  Score=45.51  Aligned_cols=39  Identities=23%  Similarity=0.311  Sum_probs=34.3

Q ss_pred             CCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHH
Q 028523           17 KQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDK   55 (208)
Q Consensus        17 ~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~   55 (208)
                      .++.+|||+||+|.+|...++.+...|.+|++++++.++
T Consensus         8 ~~~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~   46 (342)
T PLN02214          8 PAGKTVCVTGAGGYIASWIVKILLERGYTVKGTVRNPDD   46 (342)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCchh
Confidence            457789999999999999999888889999999987654

>cd05311 NAD_bind_2_malic_enz NAD(P) binding domain of malic enzyme (ME), subgroup 2

Probab=96.79  E-value=0.045  Score=40.30  Aligned_cols=90  Identities=14%  Similarity=0.226  Sum_probs=57.9

Q ss_pred             CCCCEEEEecCCchHHHHHHHHHHHcCCE---EEEEeCC----HHH--------HHHHHHhcCCCeeEecCCCccHHHHH
Q 028523           17 KQGEYVFVSAASGAVGQLVGQFAKLVGCY---VVGSAGS----KDK--------VDLLKNKFGFDEAFNYKEEPDLDAAL   81 (208)
Q Consensus        17 ~~g~~vli~ga~g~vG~~a~qla~~~g~~---v~~~~~s----~~~--------~~~~~~~~g~~~v~~~~~~~~~~~~~   81 (208)
                      -++.+++|+|+ |+.|..++..+...|++   +++++++    .++        .++++ .++... .   +. ++.+.+
T Consensus        23 l~~~rvlvlGA-GgAg~aiA~~L~~~G~~~~~i~ivdr~gl~~~~r~~~L~~~~~~la~-~~~~~~-~---~~-~l~~~l   95 (226)
T cd05311          23 IEEVKIVINGA-GAAGIAIARLLLAAGAKPENIVVVDSKGVIYEGREDDLNPDKNEIAK-ETNPEK-T---GG-TLKEAL   95 (226)
T ss_pred             ccCCEEEEECc-hHHHHHHHHHHHHcCcCcceEEEEeCCCccccccchhhhHHHHHHHH-HhccCc-c---cC-CHHHHH
Confidence            46789999996 99999999888888974   8888877    333        22333 443211 1   11 343434


Q ss_pred             HhHCCCCccEEEeCCCchhH-HHHHHhhccCCEEEEEe
Q 028523           82 KRYFPEGINIYFENVGGKML-DAVLLNMRIQGRITLCG  118 (208)
Q Consensus        82 ~~~~~~~~d~v~d~~g~~~~-~~~~~~l~~~G~~v~~g  118 (208)
                      +     ++|++|++++...+ ...++.|.++..+..+.
T Consensus        96 ~-----~~dvlIgaT~~G~~~~~~l~~m~~~~ivf~ls  128 (226)
T cd05311          96 K-----GADVFIGVSRPGVVKKEMIKKMAKDPIVFALA  128 (226)
T ss_pred             h-----cCCEEEeCCCCCCCCHHHHHhhCCCCEEEEeC
Confidence            2     38999999973333 46667777776655443

Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms, and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. This subfamily consists primarily of archaeal and bacterial ME. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydroph

>PRK06300 enoyl-(acyl carrier protein) reductase; Provisional

Probab=96.77  E-value=0.033  Score=42.84  Aligned_cols=34  Identities=12%  Similarity=0.185  Sum_probs=30.4

Q ss_pred             CCCEEEEecCC--chHHHHHHHHHHHcCCEEEEEeC
Q 028523           18 QGEYVFVSAAS--GAVGQLVGQFAKLVGCYVVGSAG   51 (208)
Q Consensus        18 ~g~~vli~ga~--g~vG~~a~qla~~~g~~v~~~~~   51 (208)
                      .|+.++|+|++  +++|.+.++.+...|++|++.++
T Consensus         7 ~gk~alITGa~~~~GIG~a~A~~la~~Ga~Vvv~~~   42 (299)
T PRK06300          7 TGKIAFIAGIGDDQGYGWGIAKALAEAGATILVGTW   42 (299)
T ss_pred             CCCEEEEeCCCCCCCHHHHHHHHHHHCCCEEEEEec
Confidence            58899999985  89999999999999999999653

>PLN02662 cinnamyl-alcohol dehydrogenase family protein

Probab=96.77  E-value=0.007  Score=46.78  Aligned_cols=38  Identities=21%  Similarity=0.293  Sum_probs=33.1

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHH
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDK   55 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~   55 (208)
                      .+.+|||+||+|.+|...+..+...|.+|++++++.+.
T Consensus         3 ~~~~ilVtGatGfIG~~l~~~L~~~g~~V~~~~r~~~~   40 (322)
T PLN02662          3 EGKVVCVTGASGYIASWLVKLLLQRGYTVKATVRDPND   40 (322)
T ss_pred             CCCEEEEECChHHHHHHHHHHHHHCCCEEEEEEcCCCc
Confidence            36789999999999999999888889999998877654

>PRK15469 ghrA bifunctional glyoxylate/hydroxypyruvate reductase A; Provisional

Probab=96.77  E-value=0.014  Score=45.05  Aligned_cols=88  Identities=14%  Similarity=0.050  Sum_probs=59.9

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHHHHhHCCCCccEEEeCCC
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVG   97 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~d~v~d~~g   97 (208)
                      .|.+|.|+| .|.+|...++.++.+|.+|++..++.++.+      +.....  ... ++.+.+.     ..|+|+.+..
T Consensus       135 ~g~tvgIvG-~G~IG~~vA~~l~afG~~V~~~~~~~~~~~------~~~~~~--~~~-~l~e~l~-----~aDvvv~~lP  199 (312)
T PRK15469        135 EDFTIGILG-AGVLGSKVAQSLQTWGFPLRCWSRSRKSWP------GVQSFA--GRE-ELSAFLS-----QTRVLINLLP  199 (312)
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCCCCCC------Cceeec--ccc-cHHHHHh-----cCCEEEECCC
Confidence            578999999 599999999999999999999886543311      111111  111 3433333     3788888877


Q ss_pred             -chh-----HHHHHHhhccCCEEEEEecc
Q 028523           98 -GKM-----LDAVLLNMRIQGRITLCGMI  120 (208)
Q Consensus        98 -~~~-----~~~~~~~l~~~G~~v~~g~~  120 (208)
                       .+.     -...+..|+++..+|.+|..
T Consensus       200 lt~~T~~li~~~~l~~mk~ga~lIN~aRG  228 (312)
T PRK15469        200 NTPETVGIINQQLLEQLPDGAYLLNLARG  228 (312)
T ss_pred             CCHHHHHHhHHHHHhcCCCCcEEEECCCc
Confidence             332     24567788888888888764

>TIGR03466 HpnA hopanoid-associated sugar epimerase

Probab=96.74  E-value=0.0036  Score=48.42  Aligned_cols=71  Identities=20%  Similarity=0.209  Sum_probs=47.9

Q ss_pred             EEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCe-eEecCCCccHHHHHHhHCCCCccEEEeCCC
Q 028523           21 YVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDE-AFNYKEEPDLDAALKRYFPEGINIYFENVG   97 (208)
Q Consensus        21 ~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~-v~~~~~~~~~~~~~~~~~~~~~d~v~d~~g   97 (208)
                      +|+|+||+|.+|...++.+...|.+|+++++++++...+. ..+... ..|..+.    +.+.+... ++|.||++.+
T Consensus         2 ~vlItG~~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~~D~~~~----~~l~~~~~-~~d~vi~~a~   73 (328)
T TIGR03466         2 KVLVTGATGFVGSAVVRLLLEQGEEVRVLVRPTSDRRNLE-GLDVEIVEGDLRDP----ASLRKAVA-GCRALFHVAA   73 (328)
T ss_pred             eEEEECCccchhHHHHHHHHHCCCEEEEEEecCccccccc-cCCceEEEeeCCCH----HHHHHHHh-CCCEEEEece
Confidence            5899999999999999988888999999998776544333 334322 2344332    12322222 4899998875

The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene.

>PRK08125 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Validated

Probab=96.73  E-value=0.011  Score=50.68  Aligned_cols=78  Identities=12%  Similarity=0.044  Sum_probs=48.6

Q ss_pred             CCCCCCEEEEecCCchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHhcCCCeeE--ecCCCccHHHHHHhHCCCCccE
Q 028523           15 SPKQGEYVFVSAASGAVGQLVGQFAKLV-GCYVVGSAGSKDKVDLLKNKFGFDEAF--NYKEEPDLDAALKRYFPEGINI   91 (208)
Q Consensus        15 ~~~~g~~vli~ga~g~vG~~a~qla~~~-g~~v~~~~~s~~~~~~~~~~~g~~~v~--~~~~~~~~~~~~~~~~~~~~d~   91 (208)
                      ..+++.+|||+||+|-+|..+++.+... |.+|+++++......... ...-...+  |..+.   ...+++... ++|+
T Consensus       311 ~~~~~~~VLVTGatGFIGs~Lv~~Ll~~~g~~V~~l~r~~~~~~~~~-~~~~~~~~~gDl~d~---~~~l~~~l~-~~D~  385 (660)
T PRK08125        311 SAKRRTRVLILGVNGFIGNHLTERLLRDDNYEVYGLDIGSDAISRFL-GHPRFHFVEGDISIH---SEWIEYHIK-KCDV  385 (660)
T ss_pred             hhhcCCEEEEECCCchHHHHHHHHHHhCCCcEEEEEeCCchhhhhhc-CCCceEEEeccccCc---HHHHHHHhc-CCCE
Confidence            4467889999999999999999887764 789999997665433222 11111222  22221   122222222 5999


Q ss_pred             EEeCCC
Q 028523           92 YFENVG   97 (208)
Q Consensus        92 v~d~~g   97 (208)
                      ||.+++
T Consensus       386 ViHlAa  391 (660)
T PRK08125        386 VLPLVA  391 (660)
T ss_pred             EEECcc
Confidence            999775

>PRK08410 2-hydroxyacid dehydrogenase; Provisional

Probab=96.72  E-value=0.013  Score=45.29  Aligned_cols=85  Identities=18%  Similarity=0.141  Sum_probs=56.0

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHHHHhHCCCCccEEEeCCC
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVG   97 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~d~v~d~~g   97 (208)
                      .|.++.|.| .|.+|...+++++.+|.+|++.+++....     ..+.    .+  . ++.+.+.+     .|+|.-++.
T Consensus       144 ~gktvGIiG-~G~IG~~vA~~~~~fgm~V~~~d~~~~~~-----~~~~----~~--~-~l~ell~~-----sDvv~lh~P  205 (311)
T PRK08410        144 KGKKWGIIG-LGTIGKRVAKIAQAFGAKVVYYSTSGKNK-----NEEY----ER--V-SLEELLKT-----SDIISIHAP  205 (311)
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHhhcCCEEEEECCCcccc-----ccCc----ee--e-cHHHHhhc-----CCEEEEeCC
Confidence            688999999 69999999999999999999998753210     1111    11  1 33333332     577776655


Q ss_pred             -ch-----hHHHHHHhhccCCEEEEEecc
Q 028523           98 -GK-----MLDAVLLNMRIQGRITLCGMI  120 (208)
Q Consensus        98 -~~-----~~~~~~~~l~~~G~~v~~g~~  120 (208)
                       .+     .-...+..|+++..+|.++..
T Consensus       206 lt~~T~~li~~~~~~~Mk~~a~lIN~aRG  234 (311)
T PRK08410        206 LNEKTKNLIAYKELKLLKDGAILINVGRG  234 (311)
T ss_pred             CCchhhcccCHHHHHhCCCCeEEEECCCc
Confidence             22     235667777777777777653

>COG1090 Predicted nucleoside-diphosphate sugar epimerase [General function prediction only]

Probab=96.72  E-value=0.003  Score=47.08  Aligned_cols=67  Identities=15%  Similarity=0.134  Sum_probs=47.0

Q ss_pred             EEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHHHHhHCCCCccEEEeCCCch
Q 028523           22 VFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVGGK   99 (208)
Q Consensus        22 vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~d~v~d~~g~~   99 (208)
                      |+|+||+|-||...++..+..|..|++.+|++.+.+... ...   +-       ..+.+.+....++|.||+-.|.+
T Consensus         1 IliTGgTGlIG~~L~~~L~~~gh~v~iltR~~~~~~~~~-~~~---v~-------~~~~~~~~~~~~~DavINLAG~~   67 (297)
T COG1090           1 ILITGGTGLIGRALTARLRKGGHQVTILTRRPPKASQNL-HPN---VT-------LWEGLADALTLGIDAVINLAGEP   67 (297)
T ss_pred             CeEeccccchhHHHHHHHHhCCCeEEEEEcCCcchhhhc-Ccc---cc-------ccchhhhcccCCCCEEEECCCCc
Confidence            689999999999999999999999999999887655433 111   11       01112222222699999988854

>PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=96.69  E-value=0.0043  Score=45.63  Aligned_cols=37  Identities=16%  Similarity=0.211  Sum_probs=32.3

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHH
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKD   54 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~   54 (208)
                      ++.+++|+|++|++|...++.+...|++|+++.+++.
T Consensus         4 ~~k~~lVtGas~~iG~~ia~~l~~~G~~v~~~~r~~~   40 (235)
T PRK06550          4 MTKTVLITGAASGIGLAQARAFLAQGAQVYGVDKQDK   40 (235)
T ss_pred             CCCEEEEcCCCchHHHHHHHHHHHCCCEEEEEeCCcc
Confidence            4678999999999999999888888999999987653

>PLN02650 dihydroflavonol-4-reductase

Probab=96.66  E-value=0.016  Score=45.53  Aligned_cols=42  Identities=26%  Similarity=0.211  Sum_probs=34.9

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHH
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLL   59 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~   59 (208)
                      ...+|||+||+|-+|...+..+...|.+|++++++.++...+
T Consensus         4 ~~k~iLVTGatGfIGs~l~~~L~~~G~~V~~~~r~~~~~~~~   45 (351)
T PLN02650          4 QKETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPANVKKV   45 (351)
T ss_pred             CCCEEEEeCCcHHHHHHHHHHHHHCCCEEEEEEcCcchhHHH
Confidence            346899999999999999998888899999988876554433

>PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus

Probab=96.65  E-value=0.086  Score=34.17  Aligned_cols=93  Identities=16%  Similarity=0.098  Sum_probs=61.3

Q ss_pred             EEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHHHHhHCCCCccEEEeCCCchh-
Q 028523           22 VFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVGGKM-  100 (208)
Q Consensus        22 vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~-  100 (208)
                      |+|.|. |.+|...++.++..+.+|++++.+++..+.++ +.|.. ++.- +. .-.+.+++..-..++.++-+++.+. 
T Consensus         1 vvI~G~-g~~~~~i~~~L~~~~~~vvvid~d~~~~~~~~-~~~~~-~i~g-d~-~~~~~l~~a~i~~a~~vv~~~~~d~~   75 (116)
T PF02254_consen    1 VVIIGY-GRIGREIAEQLKEGGIDVVVIDRDPERVEELR-EEGVE-VIYG-DA-TDPEVLERAGIEKADAVVILTDDDEE   75 (116)
T ss_dssp             EEEES--SHHHHHHHHHHHHTTSEEEEEESSHHHHHHHH-HTTSE-EEES--T-TSHHHHHHTTGGCESEEEEESSSHHH
T ss_pred             eEEEcC-CHHHHHHHHHHHhCCCEEEEEECCcHHHHHHH-hcccc-cccc-cc-hhhhHHhhcCccccCEEEEccCCHHH
Confidence            578885 99999999999996669999999999999988 66753 3322 22 2233344433337899998887542 


Q ss_pred             ---HHHHHHhhccCCEEEEEec
Q 028523          101 ---LDAVLLNMRIQGRITLCGM  119 (208)
Q Consensus       101 ---~~~~~~~l~~~G~~v~~g~  119 (208)
                         .....+.+.+..+++....
T Consensus        76 n~~~~~~~r~~~~~~~ii~~~~   97 (116)
T PF02254_consen   76 NLLIALLARELNPDIRIIARVN   97 (116)
T ss_dssp             HHHHHHHHHHHTTTSEEEEEES
T ss_pred             HHHHHHHHHHHCCCCeEEEEEC
Confidence               2234444556667665433

The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A ....

>PRK13255 thiopurine S-methyltransferase; Reviewed

Probab=96.64  E-value=0.014  Score=42.69  Aligned_cols=99  Identities=13%  Similarity=0.079  Sum_probs=60.6

Q ss_pred             CCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeE---------ecCCCcc-HHHHHHhH
Q 028523           15 SPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAF---------NYKEEPD-LDAALKRY   84 (208)
Q Consensus        15 ~~~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~v~---------~~~~~~~-~~~~~~~~   84 (208)
                      .+.++.+||+.|.  |.|.-++-+|. .|.+|++++.|+.-.+.+.++.+.....         ....- + +...+.+.
T Consensus        34 ~~~~~~rvL~~gC--G~G~da~~LA~-~G~~V~avD~s~~Ai~~~~~~~~l~~~~~~~~~~~~~~~~~v-~~~~~D~~~l  109 (218)
T PRK13255         34 ALPAGSRVLVPLC--GKSLDMLWLAE-QGHEVLGVELSELAVEQFFAENGLTPQTRQSGEFEHYQAGEI-TIYCGDFFAL  109 (218)
T ss_pred             CCCCCCeEEEeCC--CChHhHHHHHh-CCCeEEEEccCHHHHHHHHHHcCCCccccccccccccccCce-EEEECcccCC
Confidence            3467789999984  67888887775 6999999999999877664344332100         00000 0 00001111


Q ss_pred             C--C-CCccEEEeCCC---------chhHHHHHHhhccCCEEEEE
Q 028523           85 F--P-EGINIYFENVG---------GKMLDAVLLNMRIQGRITLC  117 (208)
Q Consensus        85 ~--~-~~~d~v~d~~g---------~~~~~~~~~~l~~~G~~v~~  117 (208)
                      .  . +.||.|+|..-         ...+..+.++|+|||+++.+
T Consensus       110 ~~~~~~~fd~v~D~~~~~~l~~~~R~~~~~~l~~lL~pgG~~~l~  154 (218)
T PRK13255        110 TAADLADVDAVYDRAALIALPEEMRERYVQQLAALLPAGCRGLLV  154 (218)
T ss_pred             CcccCCCeeEEEehHhHhhCCHHHHHHHHHHHHHHcCCCCeEEEE
Confidence            1  1 25899998542         12578888999999875543

>PRK07340 ornithine cyclodeaminase; Validated

Probab=96.63  E-value=0.025  Score=43.60  Aligned_cols=93  Identities=8%  Similarity=-0.050  Sum_probs=64.4

Q ss_pred             CCCCEEEEecCCchHHHHHHHHHHH-cCC-EEEEEeCCHHHHHHHHHhcCCC--eeEecCCCccHHHHHHhHCCCCccEE
Q 028523           17 KQGEYVFVSAASGAVGQLVGQFAKL-VGC-YVVGSAGSKDKVDLLKNKFGFD--EAFNYKEEPDLDAALKRYFPEGINIY   92 (208)
Q Consensus        17 ~~g~~vli~ga~g~vG~~a~qla~~-~g~-~v~~~~~s~~~~~~~~~~~g~~--~v~~~~~~~~~~~~~~~~~~~~~d~v   92 (208)
                      ....+++|+| +|..|.+.++.+.. .+. +|.+..+++++.+.+.+++...  .+. .  . +..+.+.     ..|+|
T Consensus       123 ~~~~~v~IiG-aG~qa~~~~~al~~~~~~~~v~v~~r~~~~a~~~a~~~~~~~~~~~-~--~-~~~~av~-----~aDiV  192 (304)
T PRK07340        123 APPGDLLLIG-TGVQARAHLEAFAAGLPVRRVWVRGRTAASAAAFCAHARALGPTAE-P--L-DGEAIPE-----AVDLV  192 (304)
T ss_pred             CCCCEEEEEC-CcHHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHhcCCeeE-E--C-CHHHHhh-----cCCEE
Confidence            4567899999 59999988887764 566 7999999988877666565421  111 1  1 4444443     48999


Q ss_pred             EeCCCc-hhHHHHHHhhccCCEEEEEeccc
Q 028523           93 FENVGG-KMLDAVLLNMRIQGRITLCGMIS  121 (208)
Q Consensus        93 ~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~  121 (208)
                      +.|+++ ..+-..+  ++||-++..+|...
T Consensus       193 itaT~s~~Pl~~~~--~~~g~hi~~iGs~~  220 (304)
T PRK07340        193 VTATTSRTPVYPEA--ARAGRLVVAVGAFT  220 (304)
T ss_pred             EEccCCCCceeCcc--CCCCCEEEecCCCC
Confidence            999984 3332333  78999999998764

>PRK01683 trans-aconitate 2-methyltransferase; Provisional

Probab=96.63  E-value=0.059  Score=40.42  Aligned_cols=97  Identities=10%  Similarity=0.133  Sum_probs=65.0

Q ss_pred             HhcCCCCCCEEEEecCCchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHHHHhHCCCCcc
Q 028523           12 EVCSPKQGEYVFVSAASGAVGQLVGQFAKLV-GCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGIN   90 (208)
Q Consensus        12 ~~~~~~~g~~vli~ga~g~vG~~a~qla~~~-g~~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~d   90 (208)
                      ....++++++||=+|+  |.|..+..+++.. +.+|++++.++.-.+.+++.+....++..    +..+.   .....+|
T Consensus        25 ~~~~~~~~~~vLDiGc--G~G~~~~~la~~~~~~~v~gvD~s~~~i~~a~~~~~~~~~~~~----d~~~~---~~~~~fD   95 (258)
T PRK01683         25 ARVPLENPRYVVDLGC--GPGNSTELLVERWPAARITGIDSSPAMLAEARSRLPDCQFVEA----DIASW---QPPQALD   95 (258)
T ss_pred             hhCCCcCCCEEEEEcc--cCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHhCCCCeEEEC----chhcc---CCCCCcc
Confidence            3345678899998884  4577788888776 56999999999888888744422222221    22111   1122699


Q ss_pred             EEEeCCC-------chhHHHHHHhhccCCEEEEE
Q 028523           91 IYFENVG-------GKMLDAVLLNMRIQGRITLC  117 (208)
Q Consensus        91 ~v~d~~g-------~~~~~~~~~~l~~~G~~v~~  117 (208)
                      +|+....       ...+..+.+.|++||.++..
T Consensus        96 ~v~~~~~l~~~~d~~~~l~~~~~~LkpgG~~~~~  129 (258)
T PRK01683         96 LIFANASLQWLPDHLELFPRLVSLLAPGGVLAVQ  129 (258)
T ss_pred             EEEEccChhhCCCHHHHHHHHHHhcCCCcEEEEE
Confidence            9976433       13578889999999998775

>PLN02427 UDP-apiose/xylose synthase

Probab=96.62  E-value=0.014  Score=46.58  Aligned_cols=76  Identities=14%  Similarity=0.094  Sum_probs=49.2

Q ss_pred             CCCCCEEEEecCCchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHhcCC------Cee--EecCCCccHHHHHHhHCC
Q 028523           16 PKQGEYVFVSAASGAVGQLVGQFAKLV-GCYVVGSAGSKDKVDLLKNKFGF------DEA--FNYKEEPDLDAALKRYFP   86 (208)
Q Consensus        16 ~~~g~~vli~ga~g~vG~~a~qla~~~-g~~v~~~~~s~~~~~~~~~~~g~------~~v--~~~~~~~~~~~~~~~~~~   86 (208)
                      ..+..+|||+||+|-+|..+++.+... |.+|++++++.++...+. ..+.      -+.  .|..+.    +.+.+...
T Consensus        11 ~~~~~~VlVTGgtGfIGs~lv~~L~~~~g~~V~~l~r~~~~~~~l~-~~~~~~~~~~~~~~~~Dl~d~----~~l~~~~~   85 (386)
T PLN02427         11 PIKPLTICMIGAGGFIGSHLCEKLMTETPHKVLALDVYNDKIKHLL-EPDTVPWSGRIQFHRINIKHD----SRLEGLIK   85 (386)
T ss_pred             cccCcEEEEECCcchHHHHHHHHHHhcCCCEEEEEecCchhhhhhh-ccccccCCCCeEEEEcCCCCh----HHHHHHhh
Confidence            344567999999999999999888777 579999997766655443 2221      112  233222    12333222


Q ss_pred             CCccEEEeCCC
Q 028523           87 EGINIYFENVG   97 (208)
Q Consensus        87 ~~~d~v~d~~g   97 (208)
                       ++|+||.+.+
T Consensus        86 -~~d~ViHlAa   95 (386)
T PLN02427         86 -MADLTINLAA   95 (386)
T ss_pred             -cCCEEEEccc
Confidence             4899999886

>PF01209 Ubie_methyltran: ubiE/COQ5 methyltransferase family; InterPro: IPR004033 A number of methyltransferases have been shown to share regions of similarities []

Probab=96.62  E-value=0.0018  Score=47.86  Aligned_cols=102  Identities=20%  Similarity=0.306  Sum_probs=61.4

Q ss_pred             HhcCCCCCCEEEEecCCchHHHHHHHHHHHcC--CEEEEEeCCHHHHHHHHHhc---CCCee--EecCCCccHHHHHHhH
Q 028523           12 EVCSPKQGEYVFVSAASGAVGQLVGQFAKLVG--CYVVGSAGSKDKVDLLKNKF---GFDEA--FNYKEEPDLDAALKRY   84 (208)
Q Consensus        12 ~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g--~~v~~~~~s~~~~~~~~~~~---g~~~v--~~~~~~~~~~~~~~~~   84 (208)
                      +....++|++||=.|  .|.|..+..+++..+  .+|++++.|++=++.++++.   +...+  +.-+.. ++     .+
T Consensus        41 ~~~~~~~g~~vLDv~--~GtG~~~~~l~~~~~~~~~v~~vD~s~~ML~~a~~k~~~~~~~~i~~v~~da~-~l-----p~  112 (233)
T PF01209_consen   41 KLLGLRPGDRVLDVA--CGTGDVTRELARRVGPNGKVVGVDISPGMLEVARKKLKREGLQNIEFVQGDAE-DL-----PF  112 (233)
T ss_dssp             HHHT--S--EEEEET---TTSHHHHHHGGGSS---EEEEEES-HHHHHHHHHHHHHTT--SEEEEE-BTT-B-------S
T ss_pred             hccCCCCCCEEEEeC--CChHHHHHHHHHHCCCccEEEEecCCHHHHHHHHHHHHhhCCCCeeEEEcCHH-Hh-----cC
Confidence            335678899998876  466888888898875  49999999999777776432   22211  111101 11     11


Q ss_pred             CCCCccEEEeCCCc-------hhHHHHHHhhccCCEEEEEeccc
Q 028523           85 FPEGINIYFENVGG-------KMLDAVLLNMRIQGRITLCGMIS  121 (208)
Q Consensus        85 ~~~~~d~v~d~~g~-------~~~~~~~~~l~~~G~~v~~g~~~  121 (208)
                      .++.||.|..+.|-       ..+.++.+.|+|||+++.+....
T Consensus       113 ~d~sfD~v~~~fglrn~~d~~~~l~E~~RVLkPGG~l~ile~~~  156 (233)
T PF01209_consen  113 PDNSFDAVTCSFGLRNFPDRERALREMYRVLKPGGRLVILEFSK  156 (233)
T ss_dssp             -TT-EEEEEEES-GGG-SSHHHHHHHHHHHEEEEEEEEEEEEEB
T ss_pred             CCCceeEEEHHhhHHhhCCHHHHHHHHHHHcCCCeEEEEeeccC
Confidence            12369999877662       25889999999999998887643

Apart from the ubiquinone/menaquinone biosynthesis methyltransferases (for example, the C-methyltransferase from the ubiE gene of Escherichia coli), the ubiquinone biosynthesis methyltransferases (for example, the C-methyltransferase from the COQ5 gene of Saccharomyces cerevisiae) and the menaquinone biosynthesis methyltransferases (for example, the C-methyltransferase from the MENH gene of Bacillus subtilis), this family also includes methyltransferases involved in biotin and sterol biosynthesis and in phosphatidylethanolamine methylation.; GO: 0008168 methyltransferase activity; PDB: 1VL5_C.

>TIGR00563 rsmB ribosomal RNA small subunit methyltransferase RsmB

Probab=96.60  E-value=0.056  Score=43.80  Aligned_cols=104  Identities=16%  Similarity=0.214  Sum_probs=63.0

Q ss_pred             HhcCCCCCCEEEEecCCchHHHHHHHHHHHcC-CEEEEEeCCHHHHHHHHH---hcCCCeeEecCCCccHHHHHHhH-CC
Q 028523           12 EVCSPKQGEYVFVSAASGAVGQLVGQFAKLVG-CYVVGSAGSKDKVDLLKN---KFGFDEAFNYKEEPDLDAALKRY-FP   86 (208)
Q Consensus        12 ~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g-~~v~~~~~s~~~~~~~~~---~~g~~~v~~~~~~~~~~~~~~~~-~~   86 (208)
                      ....+++|++||=.|+  +.|-.+..+++.++ .+|++++.++++.+.+++   .+|....+..... +.. ..... ..
T Consensus       232 ~~L~~~~g~~VLDlca--g~G~kt~~la~~~~~~~v~a~D~~~~~l~~~~~n~~r~g~~~~v~~~~~-d~~-~~~~~~~~  307 (426)
T TIGR00563       232 TWLAPQNEETILDACA--APGGKTTHILELAPQAQVVALDIHEHRLKRVYENLKRLGLTIKAETKDG-DGR-GPSQWAEN  307 (426)
T ss_pred             HHhCCCCCCeEEEeCC--CccHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHHHHcCCCeEEEEecc-ccc-cccccccc
Confidence            3456788999987763  34555566666654 699999999998776654   4565421111111 110 00001 12


Q ss_pred             CCccEEEe---CCC-c-------------------------hhHHHHHHhhccCCEEEEEec
Q 028523           87 EGINIYFE---NVG-G-------------------------KMLDAVLLNMRIQGRITLCGM  119 (208)
Q Consensus        87 ~~~d~v~d---~~g-~-------------------------~~~~~~~~~l~~~G~~v~~g~  119 (208)
                      +.||.|+-   |.| +                         ..+..+++.|+|||+++..-.
T Consensus       308 ~~fD~VllDaPcSg~G~~~~~p~~~~~~~~~~~~~l~~lQ~~lL~~a~~~LkpgG~lvystc  369 (426)
T TIGR00563       308 EQFDRILLDAPCSATGVIRRHPDIKWLRKPRDIAELAELQSEILDAIWPLLKTGGTLVYATC  369 (426)
T ss_pred             cccCEEEEcCCCCCCcccccCcchhhcCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeC
Confidence            26999874   444 2                         245678889999999987644

The seed alignment is built from bacterial sequences only. Eukaryotic homologs include Nop2, a protein required for processing pre-rRNA, that is likely also a rRNA methyltransferase, although the fine specificity may differ. Cutoff scores are set to avoid treating archaeal and eukaroytic homologs automatically as functionally equivalent, although they may have very similar roles.

>PF01113 DapB_N: Dihydrodipicolinate reductase, N-terminus; InterPro: IPR000846 Dihydrodipicolinate reductase catalyzes the second step in the biosynthesis of diaminopimelic acid and lysine, the NAD or NADP-dependent reduction of 2,3-dihydrodipicolinate into 2,3,4,5-tetrahydrodipicolinate [, , ]

Probab=96.59  E-value=0.028  Score=37.21  Aligned_cols=92  Identities=20%  Similarity=0.166  Sum_probs=53.2

Q ss_pred             EEEEecCCchHHHHHHHHHHH-cCCEEEEEeCCHHH------HHHHHHhcCCCeeEecCCCccHHHHHHhHCCCCccEEE
Q 028523           21 YVFVSAASGAVGQLVGQFAKL-VGCYVVGSAGSKDK------VDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYF   93 (208)
Q Consensus        21 ~vli~ga~g~vG~~a~qla~~-~g~~v~~~~~s~~~------~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~d~v~   93 (208)
                      +|.|+|++|-+|...++.+.. -+.++.....+..+      ...+. ..+...+.-+.   ++.+.+.+     +|+++
T Consensus         2 rV~i~G~~GrMG~~i~~~i~~~~~~~lv~~v~~~~~~~~g~d~g~~~-~~~~~~~~v~~---~l~~~~~~-----~DVvI   72 (124)
T PF01113_consen    2 RVGIVGASGRMGRAIAEAILESPGFELVGAVDRKPSAKVGKDVGELA-GIGPLGVPVTD---DLEELLEE-----ADVVI   72 (124)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHSTTEEEEEEEETTTSTTTTSBCHHHC-TSST-SSBEBS----HHHHTTH------SEEE
T ss_pred             EEEEECCCCHHHHHHHHHHHhcCCcEEEEEEecCCcccccchhhhhh-CcCCcccccch---hHHHhccc-----CCEEE
Confidence            589999989999999999987 57787766544431      11111 11111111111   34333332     89999


Q ss_pred             eCCCchhHHHHHHhhccCCEEEEEeccc
Q 028523           94 ENVGGKMLDAVLLNMRIQGRITLCGMIS  121 (208)
Q Consensus        94 d~~g~~~~~~~~~~l~~~G~~v~~g~~~  121 (208)
                      |++..+.....++.+...|.-+.+|.+.
T Consensus        73 DfT~p~~~~~~~~~~~~~g~~~ViGTTG  100 (124)
T PF01113_consen   73 DFTNPDAVYDNLEYALKHGVPLVIGTTG  100 (124)
T ss_dssp             EES-HHHHHHHHHHHHHHT-EEEEE-SS
T ss_pred             EcCChHHhHHHHHHHHhCCCCEEEECCC
Confidence            9998776666666666667766677654

In Escherichia coli and Mycobacterium tuberculosis, dihydrodipicolinate reductase has equal specificity for NADH and NADPH, however in Thermotoga maritima there it has a greater affinity for NADPH []. In addition, the enzyme is inhibited by high concentrations of its substrate, which consequently acts as a feedback control on the lysine biosynthesis pathway. In T. maritima, the enzyme also lacks N-terminal and C-terminal loops which are present in enzyme of the former two organisms. This entry represents the N-terminal domain of dihydrodipicolinate reductase which binds the dinucleotide NAD(P)H.; GO: 0008839 dihydrodipicolinate reductase activity, 0009089 lysine biosynthetic process via diaminopimelate, 0055114 oxidation-reduction process; PDB: 3QY9_D 1VM6_C 1ARZ_A 1DIH_A 1DRW_A 1DRV_A 1DRU_A 2DAP_A 1DAP_B 3DAP_A ....

>cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase

Probab=96.59  E-value=0.029  Score=40.50  Aligned_cols=81  Identities=15%  Similarity=0.208  Sum_probs=56.3

Q ss_pred             CCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHHHHhHCCCCccEEEeCC
Q 028523           17 KQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENV   96 (208)
Q Consensus        17 ~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~d~v~d~~   96 (208)
                      -+|.+++|.|. |.+|..+++.+...|++|+++++++++.+.+.+.+|+. .++..   ++.       ...+|+++.|.
T Consensus        26 l~gk~v~I~G~-G~vG~~~A~~L~~~G~~Vvv~D~~~~~~~~~~~~~g~~-~v~~~---~l~-------~~~~Dv~vp~A   93 (200)
T cd01075          26 LEGKTVAVQGL-GKVGYKLAEHLLEEGAKLIVADINEEAVARAAELFGAT-VVAPE---EIY-------SVDADVFAPCA   93 (200)
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHcCCE-EEcch---hhc-------cccCCEEEecc
Confidence            36789999995 89999999999999999999999888877776566643 33321   111       11488888665


Q ss_pred             C-chhHHHHHHhhc
Q 028523           97 G-GKMLDAVLLNMR  109 (208)
Q Consensus        97 g-~~~~~~~~~~l~  109 (208)
                      . +..-...++.|+
T Consensus        94 ~~~~I~~~~~~~l~  107 (200)
T cd01075          94 LGGVINDDTIPQLK  107 (200)
T ss_pred             cccccCHHHHHHcC
Confidence            4 333444455554

Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc

>PLN02240 UDP-glucose 4-epimerase

Probab=96.58  E-value=0.02  Score=44.87  Aligned_cols=34  Identities=24%  Similarity=0.263  Sum_probs=30.2

Q ss_pred             CCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCC
Q 028523           19 GEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGS   52 (208)
Q Consensus        19 g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s   52 (208)
                      +.+|+|+||+|.+|...++.+...|.+|+++++.
T Consensus         5 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~~~   38 (352)
T PLN02240          5 GRTILVTGGAGYIGSHTVLQLLLAGYKVVVIDNL   38 (352)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCC
Confidence            5789999999999999998888889999998754

>PRK14903 16S rRNA methyltransferase B; Provisional

Probab=96.54  E-value=0.12  Score=42.04  Aligned_cols=104  Identities=14%  Similarity=0.189  Sum_probs=65.1

Q ss_pred             HhcCCCCCCEEEEecCCchHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHH---hcCCCeeEecCCCccHHHHHHhHCC
Q 028523           12 EVCSPKQGEYVFVSAASGAVGQLVGQFAKLV--GCYVVGSAGSKDKVDLLKN---KFGFDEAFNYKEEPDLDAALKRYFP   86 (208)
Q Consensus        12 ~~~~~~~g~~vli~ga~g~vG~~a~qla~~~--g~~v~~~~~s~~~~~~~~~---~~g~~~v~~~~~~~~~~~~~~~~~~   86 (208)
                      ...++++|++||=.|+  +.|-.+++++..+  +.+|++++.++++.+.+++   .+|.+.+ ..... +... +.....
T Consensus       231 ~~l~~~~g~~VLD~ca--gpGgkt~~la~~~~~~g~V~a~Dis~~rl~~~~~n~~r~g~~~v-~~~~~-Da~~-l~~~~~  305 (431)
T PRK14903        231 LLMELEPGLRVLDTCA--APGGKTTAIAELMKDQGKILAVDISREKIQLVEKHAKRLKLSSI-EIKIA-DAER-LTEYVQ  305 (431)
T ss_pred             HHhCCCCCCEEEEeCC--CccHHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHHcCCCeE-EEEEC-chhh-hhhhhh
Confidence            3457889998876653  4466667777776  4599999999998877764   4565432 11111 2211 111122


Q ss_pred             CCccEEEe---CCCc-h-------------------------hHHHHHHhhccCCEEEEEecc
Q 028523           87 EGINIYFE---NVGG-K-------------------------MLDAVLLNMRIQGRITLCGMI  120 (208)
Q Consensus        87 ~~~d~v~d---~~g~-~-------------------------~~~~~~~~l~~~G~~v~~g~~  120 (208)
                      +.||.|+-   |+|. .                         .+..+++.|++||.++..-.+
T Consensus       306 ~~fD~Vl~DaPCsg~G~~~~~p~~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvYsTCs  368 (431)
T PRK14903        306 DTFDRILVDAPCTSLGTARNHPEVLRRVNKEDFKKLSEIQLRIVSQAWKLLEKGGILLYSTCT  368 (431)
T ss_pred             ccCCEEEECCCCCCCccccCChHHHHhCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECC
Confidence            36999974   4432 1                         156788999999998776553

>PRK15409 bifunctional glyoxylate/hydroxypyruvate reductase B; Provisional

Probab=96.54  E-value=0.026  Score=43.86  Aligned_cols=88  Identities=16%  Similarity=0.146  Sum_probs=58.0

Q ss_pred             CCCEEEEecCCchHHHHHHHHHH-HcCCEEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHHHHhHCCCCccEEEeCC
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAK-LVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENV   96 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~-~~g~~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~d~v~d~~   96 (208)
                      .|.++.|.| .|.+|...++.++ .+|.+|+..++.... +... .++..    +.   ++.+.+.+     .|+|.-+.
T Consensus       144 ~gktvGIiG-~G~IG~~va~~l~~~fgm~V~~~~~~~~~-~~~~-~~~~~----~~---~l~ell~~-----sDvv~lh~  208 (323)
T PRK15409        144 HHKTLGIVG-MGRIGMALAQRAHFGFNMPILYNARRHHK-EAEE-RFNAR----YC---DLDTLLQE-----SDFVCIIL  208 (323)
T ss_pred             CCCEEEEEc-ccHHHHHHHHHHHhcCCCEEEEECCCCch-hhHH-hcCcE----ec---CHHHHHHh-----CCEEEEeC
Confidence            578999999 5999999999998 899999988765322 1122 34431    11   33333332     67777766


Q ss_pred             C-ch-----hHHHHHHhhccCCEEEEEecc
Q 028523           97 G-GK-----MLDAVLLNMRIQGRITLCGMI  120 (208)
Q Consensus        97 g-~~-----~~~~~~~~l~~~G~~v~~g~~  120 (208)
                      . .+     .-...+..|+++..+|.++..
T Consensus       209 plt~~T~~li~~~~l~~mk~ga~lIN~aRG  238 (323)
T PRK15409        209 PLTDETHHLFGAEQFAKMKSSAIFINAGRG  238 (323)
T ss_pred             CCChHHhhccCHHHHhcCCCCeEEEECCCc
Confidence            5 32     124577778888777777653

>COG0111 SerA Phosphoglycerate dehydrogenase and related dehydrogenases [Amino acid transport and metabolism]

Probab=96.54  E-value=0.052  Score=42.18  Aligned_cols=87  Identities=20%  Similarity=0.182  Sum_probs=59.3

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeC-CHHHHHHHHHhcCCCeeEecCCCccHHHHHHhHCCCCccEEEeCC
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAG-SKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENV   96 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~-s~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~d~v~d~~   96 (208)
                      .|.++.|+| .|.+|...++.++.+|.+|++.++ +......   ..+.   .-.  . ++.+.+.+     .|++...+
T Consensus       141 ~gkTvGIiG-~G~IG~~va~~l~afgm~v~~~d~~~~~~~~~---~~~~---~~~--~-~Ld~lL~~-----sDiv~lh~  205 (324)
T COG0111         141 AGKTVGIIG-LGRIGRAVAKRLKAFGMKVIGYDPYSPRERAG---VDGV---VGV--D-SLDELLAE-----ADILTLHL  205 (324)
T ss_pred             cCCEEEEEC-CCHHHHHHHHHHHhCCCeEEEECCCCchhhhc---cccc---eec--c-cHHHHHhh-----CCEEEEcC
Confidence            378999999 599999999999999999999997 3322111   1111   111  1 34444443     68888776


Q ss_pred             C-ch-----hHHHHHHhhccCCEEEEEec
Q 028523           97 G-GK-----MLDAVLLNMRIQGRITLCGM  119 (208)
Q Consensus        97 g-~~-----~~~~~~~~l~~~G~~v~~g~  119 (208)
                      . .+     .-...+..|++|..++.++.
T Consensus       206 PlT~eT~g~i~~~~~a~MK~gailIN~aR  234 (324)
T COG0111         206 PLTPETRGLINAEELAKMKPGAILINAAR  234 (324)
T ss_pred             CCCcchhcccCHHHHhhCCCCeEEEECCC
Confidence            6 32     23567788888888887765

>PRK12480 D-lactate dehydrogenase; Provisional

Probab=96.52  E-value=0.053  Score=42.32  Aligned_cols=86  Identities=15%  Similarity=0.149  Sum_probs=59.0

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHHHHhHCCCCccEEEeCCC
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVG   97 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~d~v~d~~g   97 (208)
                      .|.+|.|+| .|.+|...++.++..|.+|++.+++++...... .        +. . ++.+.+.     ..|+|+.++.
T Consensus       145 ~g~~VgIIG-~G~IG~~vA~~L~~~G~~V~~~d~~~~~~~~~~-~--------~~-~-~l~ell~-----~aDiVil~lP  207 (330)
T PRK12480        145 KNMTVAIIG-TGRIGAATAKIYAGFGATITAYDAYPNKDLDFL-T--------YK-D-SVKEAIK-----DADIISLHVP  207 (330)
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHhCCCEEEEEeCChhHhhhhh-h--------cc-C-CHHHHHh-----cCCEEEEeCC
Confidence            577899999 599999999999999999999998765422111 0        11 1 3333333     3788888877


Q ss_pred             c-h-----hHHHHHHhhccCCEEEEEecc
Q 028523           98 G-K-----MLDAVLLNMRIQGRITLCGMI  120 (208)
Q Consensus        98 ~-~-----~~~~~~~~l~~~G~~v~~g~~  120 (208)
                      . +     .....+..|+++..+|.++..
T Consensus       208 ~t~~t~~li~~~~l~~mk~gavlIN~aRG  236 (330)
T PRK12480        208 ANKESYHLFDKAMFDHVKKGAILVNAARG  236 (330)
T ss_pred             CcHHHHHHHhHHHHhcCCCCcEEEEcCCc
Confidence            3 2     234566778888888887653

>TIGR00477 tehB tellurite resistance protein TehB

Probab=96.52  E-value=0.018  Score=41.34  Aligned_cols=102  Identities=11%  Similarity=0.088  Sum_probs=61.8

Q ss_pred             HHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH---hcCCCeeEecCCCccHHHHHHhH
Q 028523            8 AGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKN---KFGFDEAFNYKEEPDLDAALKRY   84 (208)
Q Consensus         8 ~~l~~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~---~~g~~~v~~~~~~~~~~~~~~~~   84 (208)
                      ..+.+.....++.+||-.|+  |.|..+..+++ .|.+|++++.++.-.+.+++   ..+..  +..... +...  ...
T Consensus        20 ~~l~~~~~~~~~~~vLDiGc--G~G~~a~~la~-~g~~V~~iD~s~~~l~~a~~~~~~~~~~--v~~~~~-d~~~--~~~   91 (195)
T TIGR00477        20 SAVREAVKTVAPCKTLDLGC--GQGRNSLYLSL-AGYDVRAWDHNPASIASVLDMKARENLP--LRTDAY-DINA--AAL   91 (195)
T ss_pred             HHHHHHhccCCCCcEEEeCC--CCCHHHHHHHH-CCCeEEEEECCHHHHHHHHHHHHHhCCC--ceeEec-cchh--ccc
Confidence            34444455556778998884  56777777776 47899999999887666542   22322  111111 1111  011


Q ss_pred             CCCCccEEEeCC-----C----chhHHHHHHhhccCCEEEEEe
Q 028523           85 FPEGINIYFENV-----G----GKMLDAVLLNMRIQGRITLCG  118 (208)
Q Consensus        85 ~~~~~d~v~d~~-----g----~~~~~~~~~~l~~~G~~v~~g  118 (208)
                       .+.+|+|+...     .    ...+..+.+.|+|||.++.+.
T Consensus        92 -~~~fD~I~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lli~~  133 (195)
T TIGR00477        92 -NEDYDFIFSTVVFMFLQAGRVPEIIANMQAHTRPGGYNLIVA  133 (195)
T ss_pred             -cCCCCEEEEecccccCCHHHHHHHHHHHHHHhCCCcEEEEEE
Confidence             23699997642     2    135778888999999965553

Part of a tellurite-reducing operon tehA and tehB

>PLN00198 anthocyanidin reductase; Provisional

Probab=96.50  E-value=0.018  Score=45.00  Aligned_cols=38  Identities=13%  Similarity=0.121  Sum_probs=33.0

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHH
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDK   55 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~   55 (208)
                      .+.+|||+||+|.+|...++.+...|++|++++++.+.
T Consensus         8 ~~~~vlItG~~GfIG~~l~~~L~~~g~~V~~~~r~~~~   45 (338)
T PLN00198          8 GKKTACVIGGTGFLASLLIKLLLQKGYAVNTTVRDPEN   45 (338)
T ss_pred             CCCeEEEECCchHHHHHHHHHHHHCCCEEEEEECCCCC
Confidence            47889999999999999999888889999888876544

>PLN02233 ubiquinone biosynthesis methyltransferase

Probab=96.50  E-value=0.07  Score=40.20  Aligned_cols=102  Identities=16%  Similarity=0.194  Sum_probs=64.8

Q ss_pred             hcCCCCCCEEEEecCCchHHHHHHHHHHHcC--CEEEEEeCCHHHHHHHHHhcC------CCeeEecCCCccHHHHHHhH
Q 028523           13 VCSPKQGEYVFVSAASGAVGQLVGQFAKLVG--CYVVGSAGSKDKVDLLKNKFG------FDEAFNYKEEPDLDAALKRY   84 (208)
Q Consensus        13 ~~~~~~g~~vli~ga~g~vG~~a~qla~~~g--~~v~~~~~s~~~~~~~~~~~g------~~~v~~~~~~~~~~~~~~~~   84 (208)
                      ...++++++||-.|+  |.|..+..+++..+  .+|++++.|++-.+.+++...      .+.+ ..... +..+ + ..
T Consensus        68 ~~~~~~~~~VLDlGc--GtG~~~~~la~~~~~~~~V~gvD~S~~ml~~A~~r~~~~~~~~~~~i-~~~~~-d~~~-l-p~  141 (261)
T PLN02233         68 WSGAKMGDRVLDLCC--GSGDLAFLLSEKVGSDGKVMGLDFSSEQLAVAASRQELKAKSCYKNI-EWIEG-DATD-L-PF  141 (261)
T ss_pred             HhCCCCCCEEEEECC--cCCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHhhhhhhccCCCe-EEEEc-cccc-C-CC
Confidence            346788999998884  44667777887765  599999999998777763322      1111 11111 1110 0 11


Q ss_pred             CCCCccEEEeCCC-------chhHHHHHHhhccCCEEEEEecc
Q 028523           85 FPEGINIYFENVG-------GKMLDAVLLNMRIQGRITLCGMI  120 (208)
Q Consensus        85 ~~~~~d~v~d~~g-------~~~~~~~~~~l~~~G~~v~~g~~  120 (208)
                      .++.||.|+-..+       ...+.++.+.|+|||+++.+...
T Consensus       142 ~~~sfD~V~~~~~l~~~~d~~~~l~ei~rvLkpGG~l~i~d~~  184 (261)
T PLN02233        142 DDCYFDAITMGYGLRNVVDRLKAMQEMYRVLKPGSRVSILDFN  184 (261)
T ss_pred             CCCCEeEEEEecccccCCCHHHHHHHHHHHcCcCcEEEEEECC
Confidence            1236999976432       23588999999999999887553

>PRK13403 ketol-acid reductoisomerase; Provisional

Probab=96.49  E-value=0.065  Score=41.42  Aligned_cols=87  Identities=20%  Similarity=0.200  Sum_probs=60.8

Q ss_pred             CCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHHHHhHCCCCccEEEeC
Q 028523           16 PKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFEN   95 (208)
Q Consensus        16 ~~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~d~v~d~   95 (208)
                      .-+|.+|.|+| .|.+|...++.++..|.+|++..++....+.+. ..|.. +.      ++.+.++     ..|+|+-+
T Consensus        13 ~LkgKtVGIIG-~GsIG~amA~nL~d~G~~ViV~~r~~~s~~~A~-~~G~~-v~------sl~Eaak-----~ADVV~ll   78 (335)
T PRK13403         13 LLQGKTVAVIG-YGSQGHAQAQNLRDSGVEVVVGVRPGKSFEVAK-ADGFE-VM------SVSEAVR-----TAQVVQML   78 (335)
T ss_pred             hhCcCEEEEEe-EcHHHHHHHHHHHHCcCEEEEEECcchhhHHHH-HcCCE-EC------CHHHHHh-----cCCEEEEe
Confidence            34688999999 599999999999999999998876655555555 55652 21      3344443     37999988


Q ss_pred             CCch----hH-HHHHHhhccCCEEEE
Q 028523           96 VGGK----ML-DAVLLNMRIQGRITL  116 (208)
Q Consensus        96 ~g~~----~~-~~~~~~l~~~G~~v~  116 (208)
                      ++.+    .+ ...+..|+++..++.
T Consensus        79 LPd~~t~~V~~~eil~~MK~GaiL~f  104 (335)
T PRK13403         79 LPDEQQAHVYKAEVEENLREGQMLLF  104 (335)
T ss_pred             CCChHHHHHHHHHHHhcCCCCCEEEE
Confidence            8732    22 356777888765544

>PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.48  E-value=0.047  Score=41.57  Aligned_cols=79  Identities=15%  Similarity=0.114  Sum_probs=54.8

Q ss_pred             CCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHHHHhHCCCCccEEEeC
Q 028523           16 PKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFEN   95 (208)
Q Consensus        16 ~~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~d~v~d~   95 (208)
                      --.|.+++|.|+++-+|...+.++...|++|+++.+..   +                  ++.+.++     .+|+++.+
T Consensus       156 ~l~Gk~vvViG~gg~vGkpia~~L~~~gatVtv~~~~t---~------------------~L~~~~~-----~aDIvI~A  209 (283)
T PRK14192        156 ELAGKHAVVVGRSAILGKPMAMMLLNANATVTICHSRT---Q------------------NLPELVK-----QADIIVGA  209 (283)
T ss_pred             CCCCCEEEEECCcHHHHHHHHHHHHhCCCEEEEEeCCc---h------------------hHHHHhc-----cCCEEEEc
Confidence            35789999999755599999999999999777766421   1                  1111111     38999999


Q ss_pred             CCchhHHHHHHhhccCCEEEEEeccc
Q 028523           96 VGGKMLDAVLLNMRIQGRITLCGMIS  121 (208)
Q Consensus        96 ~g~~~~~~~~~~l~~~G~~v~~g~~~  121 (208)
                      +|.+.+ --.+.++++-.++.+|...
T Consensus       210 tG~~~~-v~~~~lk~gavViDvg~n~  234 (283)
T PRK14192        210 VGKPEL-IKKDWIKQGAVVVDAGFHP  234 (283)
T ss_pred             cCCCCc-CCHHHcCCCCEEEEEEEee
Confidence            985432 2235688888888887643

>COG0623 FabI Enoyl-[acyl-carrier-protein]

Probab=96.47  E-value=0.15  Score=37.28  Aligned_cols=106  Identities=10%  Similarity=0.092  Sum_probs=68.3

Q ss_pred             CCCCCEEEEecCC--chHHHHHHHHHHHcCCEEEEEeCCHHHH---HHHHHhcCCCeeEe--cCCCccHHHHHHhHCC--
Q 028523           16 PKQGEYVFVSAAS--GAVGQLVGQFAKLVGCYVVGSAGSKDKV---DLLKNKFGFDEAFN--YKEEPDLDAALKRYFP--   86 (208)
Q Consensus        16 ~~~g~~vli~ga~--g~vG~~a~qla~~~g~~v~~~~~s~~~~---~~~~~~~g~~~v~~--~~~~~~~~~~~~~~~~--   86 (208)
                      +-.|++.||.|-.  .+++--.++.++..|+++..|...++-.   +.+.+++|.+.++.  ..+...+.+...++..  
T Consensus         3 ~L~GK~~lI~Gvan~rSIAwGIAk~l~~~GAeL~fTy~~e~l~krv~~la~~~~s~~v~~cDV~~d~~i~~~f~~i~~~~   82 (259)
T COG0623           3 LLEGKRILIMGVANNRSIAWGIAKALAEQGAELAFTYQGERLEKRVEELAEELGSDLVLPCDVTNDESIDALFATIKKKW   82 (259)
T ss_pred             ccCCceEEEEEecccccHHHHHHHHHHHcCCEEEEEeccHHHHHHHHHHHhhccCCeEEecCCCCHHHHHHHHHHHHHhh
Confidence            3468999999843  4677778899999999999999887533   33333666655443  3332133333333332  


Q ss_pred             CCccEEEeCCCc-h-----------------------------hHHHHHHhhccCCEEEEEeccc
Q 028523           87 EGINIYFENVGG-K-----------------------------MLDAVLLNMRIQGRITLCGMIS  121 (208)
Q Consensus        87 ~~~d~v~d~~g~-~-----------------------------~~~~~~~~l~~~G~~v~~g~~~  121 (208)
                      +++|.++.+++. +                             ....+..+|++||.++.+.-..
T Consensus        83 g~lD~lVHsIaFa~k~el~G~~~dtsre~f~~a~~IS~YS~~~lak~a~~lM~~ggSiltLtYlg  147 (259)
T COG0623          83 GKLDGLVHSIAFAPKEELKGDYLDTSREGFLIAMDISAYSFTALAKAARPLMNNGGSILTLTYLG  147 (259)
T ss_pred             CcccEEEEEeccCChHHhCCcccccCHHHHHhHhhhhHhhHHHHHHHHHHhcCCCCcEEEEEecc
Confidence            379999888762 2                             0245667888999888776544

>PRK08287 cobalt-precorrin-6Y C(15)-methyltransferase; Validated

Probab=96.46  E-value=0.18  Score=35.83  Aligned_cols=98  Identities=16%  Similarity=0.219  Sum_probs=62.8

Q ss_pred             HhcCCCCCCEEEEecCCchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHH---hcCCCeeEecCCCccHHHHHHhHCCC
Q 028523           12 EVCSPKQGEYVFVSAASGAVGQLVGQFAKLV-GCYVVGSAGSKDKVDLLKN---KFGFDEAFNYKEEPDLDAALKRYFPE   87 (208)
Q Consensus        12 ~~~~~~~g~~vli~ga~g~vG~~a~qla~~~-g~~v~~~~~s~~~~~~~~~---~~g~~~v~~~~~~~~~~~~~~~~~~~   87 (208)
                      ....+.++++||=.|+  |.|..++.+++.. +.+|++++.+++..+.+++   .++...+ ..... +....    ..+
T Consensus        25 ~~l~~~~~~~vLDiG~--G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~n~~~~~~~~i-~~~~~-d~~~~----~~~   96 (187)
T PRK08287         25 SKLELHRAKHLIDVGA--GTGSVSIEAALQFPSLQVTAIERNPDALRLIKENRQRFGCGNI-DIIPG-EAPIE----LPG   96 (187)
T ss_pred             HhcCCCCCCEEEEECC--cCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhCCCCe-EEEec-Cchhh----cCc
Confidence            4456778899988873  4477777777765 4699999999987766653   3343221 11111 21111    123


Q ss_pred             CccEEEeCCC----chhHHHHHHhhccCCEEEEE
Q 028523           88 GINIYFENVG----GKMLDAVLLNMRIQGRITLC  117 (208)
Q Consensus        88 ~~d~v~d~~g----~~~~~~~~~~l~~~G~~v~~  117 (208)
                      .+|+|+....    ...+..+.+.|+++|+++..
T Consensus        97 ~~D~v~~~~~~~~~~~~l~~~~~~Lk~gG~lv~~  130 (187)
T PRK08287         97 KADAIFIGGSGGNLTAIIDWSLAHLHPGGRLVLT  130 (187)
T ss_pred             CCCEEEECCCccCHHHHHHHHHHhcCCCeEEEEE
Confidence            6999986432    13567889999999998764

>PLN02695 GDP-D-mannose-3',5'-epimerase

Probab=96.46  E-value=0.011  Score=46.83  Aligned_cols=37  Identities=19%  Similarity=0.310  Sum_probs=33.0

Q ss_pred             CCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCH
Q 028523           17 KQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSK   53 (208)
Q Consensus        17 ~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~   53 (208)
                      ..+.+|||+||+|-+|..++..+...|.+|+++++..
T Consensus        19 ~~~~~IlVtGgtGfIG~~l~~~L~~~G~~V~~v~r~~   55 (370)
T PLN02695         19 SEKLRICITGAGGFIASHIARRLKAEGHYIIASDWKK   55 (370)
T ss_pred             CCCCEEEEECCccHHHHHHHHHHHhCCCEEEEEEecc
Confidence            4678999999999999999999998999999998654

>PRK10258 biotin biosynthesis protein BioC; Provisional

Probab=96.45  E-value=0.24  Score=36.96  Aligned_cols=96  Identities=15%  Similarity=0.185  Sum_probs=60.6

Q ss_pred             CCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHHHHhHCCCCccEEEe
Q 028523           15 SPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFE   94 (208)
Q Consensus        15 ~~~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~d~v~d   94 (208)
                      ...++++||-.|+ | .|..+..+++ .|.++++++.+++..+.+++.......+..    +... + ...++.||+|+.
T Consensus        39 ~~~~~~~vLDiGc-G-~G~~~~~l~~-~~~~v~~~D~s~~~l~~a~~~~~~~~~~~~----d~~~-~-~~~~~~fD~V~s  109 (251)
T PRK10258         39 PQRKFTHVLDAGC-G-PGWMSRYWRE-RGSQVTALDLSPPMLAQARQKDAADHYLAG----DIES-L-PLATATFDLAWS  109 (251)
T ss_pred             CccCCCeEEEeeC-C-CCHHHHHHHH-cCCeEEEEECCHHHHHHHHhhCCCCCEEEc----Cccc-C-cCCCCcEEEEEE
Confidence            3446788999885 3 2655555544 578999999999988888733322222211    1111 0 112236999986


Q ss_pred             CCC-------chhHHHHHHhhccCCEEEEEec
Q 028523           95 NVG-------GKMLDAVLLNMRIQGRITLCGM  119 (208)
Q Consensus        95 ~~g-------~~~~~~~~~~l~~~G~~v~~g~  119 (208)
                      ...       ...+..+.+.|+|||.++....
T Consensus       110 ~~~l~~~~d~~~~l~~~~~~Lk~gG~l~~~~~  141 (251)
T PRK10258        110 NLAVQWCGNLSTALRELYRVVRPGGVVAFTTL  141 (251)
T ss_pred             CchhhhcCCHHHHHHHHHHHcCCCeEEEEEeC
Confidence            532       1357888999999999987644

>TIGR01777 yfcH conserved hypothetical protein TIGR01777

Probab=96.45  E-value=0.0031  Score=47.95  Aligned_cols=66  Identities=17%  Similarity=0.109  Sum_probs=44.1

Q ss_pred             EEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHHHHhHCCCCccEEEeCCC
Q 028523           22 VFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVG   97 (208)
Q Consensus        22 vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~d~v~d~~g   97 (208)
                      |||+||+|-+|...++.+...|.+|+++++++....... ..+   +.+.... ....    .. .++|+||.+.+
T Consensus         1 vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~---~~~~~~~-~~~~----~~-~~~D~Vvh~a~   66 (292)
T TIGR01777         1 ILITGGTGFIGRALTQRLTKDGHEVTILTRSPPAGANTK-WEG---YKPWAPL-AESE----AL-EGADAVINLAG   66 (292)
T ss_pred             CEEEcccchhhHHHHHHHHHcCCEEEEEeCCCCCCCccc-cee---eeccccc-chhh----hc-CCCCEEEECCC
Confidence            689999999999999988888999999998876543322 111   1111111 1111    11 25999999887

This model represents a clade of proteins of unknown function including the E. coli yfcH protein.

>TIGR02752 MenG_heptapren 2-heptaprenyl-1,4-naphthoquinone methyltransferase

Probab=96.43  E-value=0.03  Score=41.18  Aligned_cols=100  Identities=13%  Similarity=0.153  Sum_probs=64.5

Q ss_pred             HhcCCCCCCEEEEecCCchHHHHHHHHHHHcC--CEEEEEeCCHHHHHHHHHhc---CCCe--eEecCCCccHHHHHHhH
Q 028523           12 EVCSPKQGEYVFVSAASGAVGQLVGQFAKLVG--CYVVGSAGSKDKVDLLKNKF---GFDE--AFNYKEEPDLDAALKRY   84 (208)
Q Consensus        12 ~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g--~~v~~~~~s~~~~~~~~~~~---g~~~--v~~~~~~~~~~~~~~~~   84 (208)
                      ....++++++||=.|+  |.|..+..+++..+  .+|++++.+++..+.+++.+   +.+.  ++..    +... + ..
T Consensus        39 ~~l~~~~~~~vLDiGc--G~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~v~~~~~----d~~~-~-~~  110 (231)
T TIGR02752        39 KRMNVQAGTSALDVCC--GTADWSIALAEAVGPEGHVIGLDFSENMLSVGRQKVKDAGLHNVELVHG----NAME-L-PF  110 (231)
T ss_pred             HhcCCCCCCEEEEeCC--CcCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEEe----chhc-C-CC
Confidence            4456788999998884  55777778887764  59999999988777766432   2222  2211    1111 0 11


Q ss_pred             CCCCccEEEeCCC-------chhHHHHHHhhccCCEEEEEec
Q 028523           85 FPEGINIYFENVG-------GKMLDAVLLNMRIQGRITLCGM  119 (208)
Q Consensus        85 ~~~~~d~v~d~~g-------~~~~~~~~~~l~~~G~~v~~g~  119 (208)
                      ..+.+|+|+-...       ...+..+.+.|++||.++....
T Consensus       111 ~~~~fD~V~~~~~l~~~~~~~~~l~~~~~~Lk~gG~l~~~~~  152 (231)
T TIGR02752       111 DDNSFDYVTIGFGLRNVPDYMQVLREMYRVVKPGGKVVCLET  152 (231)
T ss_pred             CCCCccEEEEecccccCCCHHHHHHHHHHHcCcCeEEEEEEC
Confidence            2236999975422       1256778899999999987644

MenG is a generic term for a methyltransferase that catalyzes the last step in menaquinone biosynthesis; the exact enzymatic activity differs for different MenG because the menaquinone differ in their prenoid side chains in different species. Members of this MenG protein family are 2-heptaprenyl-1,4-naphthoquinone methyltransferase, and are found together in operons with the two subunits of the heptaprenyl diphosphate synthase in Bacillus subtilis and related species.

>TIGR02197 heptose_epim ADP-L-glycero-D-manno-heptose-6-epimerase

Probab=96.42  E-value=0.012  Score=45.19  Aligned_cols=73  Identities=14%  Similarity=0.083  Sum_probs=43.8

Q ss_pred             EEEecCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHhcCCCeeE-ecCCCccHHHHHHhHCCCCccEEEeCCC
Q 028523           22 VFVSAASGAVGQLVGQFAKLVGC-YVVGSAGSKDKVDLLKNKFGFDEAF-NYKEEPDLDAALKRYFPEGINIYFENVG   97 (208)
Q Consensus        22 vli~ga~g~vG~~a~qla~~~g~-~v~~~~~s~~~~~~~~~~~g~~~v~-~~~~~~~~~~~~~~~~~~~~d~v~d~~g   97 (208)
                      |||+||+|.+|..+++.+...|. .|+++.++.... .+. .++...+. +..+. +..+.+.+..-.++|+|+.+++
T Consensus         1 ilItGatG~iG~~l~~~L~~~g~~~v~~~~~~~~~~-~~~-~~~~~~~~~d~~~~-~~~~~~~~~~~~~~D~vvh~A~   75 (314)
T TIGR02197         1 IIVTGGAGFIGSNLVKALNERGITDILVVDNLRDGH-KFL-NLADLVIADYIDKE-DFLDRLEKGAFGKIEAIFHQGA   75 (314)
T ss_pred             CEEeCCcchhhHHHHHHHHHcCCceEEEEecCCCch-hhh-hhhheeeeccCcch-hHHHHHHhhccCCCCEEEECcc
Confidence            68999999999999999999998 788776543322 222 22221121 12111 2223332211136999999886

This family consists of examples of ADP-L-glycero-D-mannoheptose-6-epimerase, an enzyme involved in biosynthesis of the inner core of lipopolysaccharide (LPS) for Gram-negative bacteria. This enzyme is homologous to UDP-glucose 4-epimerase (TIGR01179) and belongs to the NAD dependent epimerase/dehydratase family (pfam01370).

>PRK14103 trans-aconitate 2-methyltransferase; Provisional

Probab=96.42  E-value=0.085  Score=39.55  Aligned_cols=95  Identities=14%  Similarity=0.137  Sum_probs=64.8

Q ss_pred             HhcCCCCCCEEEEecCCchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHHHHhHCCCCcc
Q 028523           12 EVCSPKQGEYVFVSAASGAVGQLVGQFAKLV-GCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGIN   90 (208)
Q Consensus        12 ~~~~~~~g~~vli~ga~g~vG~~a~qla~~~-g~~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~d   90 (208)
                      ......++++||=.|+  |.|..+..+++.. +.+|++++.|+.-.+.++ +-+.+-+ .   . +..+ +  ...+.||
T Consensus        23 ~~l~~~~~~~vLDlGc--G~G~~~~~l~~~~p~~~v~gvD~s~~~~~~a~-~~~~~~~-~---~-d~~~-~--~~~~~fD   91 (255)
T PRK14103         23 ARVGAERARRVVDLGC--GPGNLTRYLARRWPGAVIEALDSSPEMVAAAR-ERGVDAR-T---G-DVRD-W--KPKPDTD   91 (255)
T ss_pred             HhCCCCCCCEEEEEcC--CCCHHHHHHHHHCCCCEEEEEECCHHHHHHHH-hcCCcEE-E---c-Chhh-C--CCCCCce
Confidence            4455678899998884  4477777888765 679999999998888887 5443322 1   1 3221 1  1123799


Q ss_pred             EEEeCCC-------chhHHHHHHhhccCCEEEEE
Q 028523           91 IYFENVG-------GKMLDAVLLNMRIQGRITLC  117 (208)
Q Consensus        91 ~v~d~~g-------~~~~~~~~~~l~~~G~~v~~  117 (208)
                      +|+....       ...+..+.+.|+|||.++..
T Consensus        92 ~v~~~~~l~~~~d~~~~l~~~~~~LkpgG~l~~~  125 (255)
T PRK14103         92 VVVSNAALQWVPEHADLLVRWVDELAPGSWIAVQ  125 (255)
T ss_pred             EEEEehhhhhCCCHHHHHHHHHHhCCCCcEEEEE
Confidence            9987442       23577888999999998765

>PF08241 Methyltransf_11: Methyltransferase domain; InterPro: IPR013216 Methyl transfer from the ubiquitous S-adenosyl-L-methionine (SAM) to either nitrogen, oxygen or carbon atoms is frequently employed in diverse organisms ranging from bacteria to plants and mammals

Probab=96.42  E-value=0.0038  Score=38.70  Aligned_cols=82  Identities=18%  Similarity=0.279  Sum_probs=52.4

Q ss_pred             chHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCe--eEecCCCccHHHHHHhHCCCCccEEEeCCC-------ch
Q 028523           29 GAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDE--AFNYKEEPDLDAALKRYFPEGINIYFENVG-------GK   99 (208)
Q Consensus        29 g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~--v~~~~~~~~~~~~~~~~~~~~~d~v~d~~g-------~~   99 (208)
                      .|.|..+..+++.-+.++++++.+++..+.+++......  +...+.. ++     .+.++.||.|+....       ..
T Consensus         5 ~G~G~~~~~l~~~~~~~v~~~D~~~~~~~~~~~~~~~~~~~~~~~d~~-~l-----~~~~~sfD~v~~~~~~~~~~~~~~   78 (95)
T PF08241_consen    5 CGTGRFAAALAKRGGASVTGIDISEEMLEQARKRLKNEGVSFRQGDAE-DL-----PFPDNSFDVVFSNSVLHHLEDPEA   78 (95)
T ss_dssp             -TTSHHHHHHHHTTTCEEEEEES-HHHHHHHHHHTTTSTEEEEESBTT-SS-----SS-TT-EEEEEEESHGGGSSHHHH
T ss_pred             CcCCHHHHHHHhccCCEEEEEeCCHHHHHHHHhcccccCchheeehHH-hC-----ccccccccccccccceeeccCHHH
Confidence            357888888888866799999999998888884443322  2111111 11     122236899976432       13


Q ss_pred             hHHHHHHhhccCCEEEE
Q 028523          100 MLDAVLLNMRIQGRITL  116 (208)
Q Consensus       100 ~~~~~~~~l~~~G~~v~  116 (208)
                      .+.++.+.|+|+|+++.
T Consensus        79 ~l~e~~rvLk~gG~l~~   95 (95)
T PF08241_consen   79 ALREIYRVLKPGGRLVI   95 (95)
T ss_dssp             HHHHHHHHEEEEEEEEE
T ss_pred             HHHHHHHHcCcCeEEeC
Confidence            57899999999999873

The reaction is catalyzed by methyltransferases (Mtases) and modifies DNA, RNA, proteins and small molecules, such as catechol for regulatory purposes. The various aspects of the role of DNA methylation in prokaryotic restriction-modification systems and in a number of cellular processes in eukaryotes including gene regulation and differentiation is well documented. This entry represents a methyltransferase domain found in a large variety of SAM-dependent methyltransferases including, but not limited to: Arsenite methyltransferase (2.1.1.137 from EC) which converts arsenical compounds to their methylated forms [] Biotin synthesis protein bioC, which is involved in the early stages of biotin biosyntheis [] Arginine N-methyltransferase 1, an arginine-methylating enzyme which acts on residues present in a glycine and argine-rich domain and can methylate histones [] Hexaprenyldihydroxybenzoate methyltransferase (2.1.1.114 from EC), a mitochodrial enzyme involved in ubiquinone biosynthesis [] A probable cobalt-precorrin-6Y C(15)-methyltransferase thought to be involved in adenosylcobalamin biosynthesis [] Sterol 24-C-methyltransferase (2.1.1.41 from EC), shown to participate in ergosterol biosynthesis [] 3-demethylubiquinone-9 3-methyltransferase (2.1.1.64 from EC) involved in ubiquinone biosynthesis [] Structural studies show that this domain forms the Rossman-like alpha-beta fold typical of SAM-dependent methyltransferases [, , ]. ; GO: 0008168 methyltransferase activity, 0008152 metabolic process; PDB: 3CGG_B 3CCF_B 3BKW_B 2PXX_A 3I9F_A 2YQZ_B 2YR0_A 3BUS_A 3EGE_A 3G5L_B ....

>smart00822 PKS_KR This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain

Probab=96.41  E-value=0.017  Score=40.03  Aligned_cols=76  Identities=16%  Similarity=0.184  Sum_probs=45.7

Q ss_pred             EEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCHHHH-------HHHHHhcCCCe-e--EecCCCccHHHHHHhHCC--C
Q 028523           21 YVFVSAASGAVGQLVGQFAKLVGC-YVVGSAGSKDKV-------DLLKNKFGFDE-A--FNYKEEPDLDAALKRYFP--E   87 (208)
Q Consensus        21 ~vli~ga~g~vG~~a~qla~~~g~-~v~~~~~s~~~~-------~~~~~~~g~~~-v--~~~~~~~~~~~~~~~~~~--~   87 (208)
                      +++|.||+|++|..+++.+...|. .|+.+.++++..       +.++ +.+... .  .|..+...+.+.+.+...  +
T Consensus         2 ~~li~Ga~~~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   80 (180)
T smart00822        2 TYLITGGLGGLGLELARWLAERGARHLVLLSRSGPDAPGAAELLAELE-ALGAEVTVVACDVADRAALAAALAAIPARLG   80 (180)
T ss_pred             EEEEEcCCChHHHHHHHHHHHhhCCeEEEEeCCCCCCccHHHHHHHHH-hcCCeEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            589999999999999988888887 677777765432       2222 233321 2  233322122333333221  3


Q ss_pred             CccEEEeCCC
Q 028523           88 GINIYFENVG   97 (208)
Q Consensus        88 ~~d~v~d~~g   97 (208)
                      ++|.++.+.+
T Consensus        81 ~id~li~~ag   90 (180)
T smart00822       81 PLRGVIHAAG   90 (180)
T ss_pred             CeeEEEEccc
Confidence            5899998876

It uses NADPH to reduce the keto group to a hydroxy group.

>COG1179 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1 [Coenzyme metabolism]

Probab=96.40  E-value=0.082  Score=38.89  Aligned_cols=103  Identities=14%  Similarity=0.119  Sum_probs=58.5

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCHH-------------------HHHHHHH---hcCCC-eeEecCC
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGC-YVVGSAGSKD-------------------KVDLLKN---KFGFD-EAFNYKE   73 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~-~v~~~~~s~~-------------------~~~~~~~---~~g~~-~v~~~~~   73 (208)
                      +..+|+|.|. ||||-+++..+-..|. ++..++...-                   +.+.+++   ++.+. ++--.++
T Consensus        29 ~~~~V~VvGi-GGVGSw~veALaRsGig~itlID~D~v~vTN~NRQi~A~~~~iGk~Kv~vm~eri~~InP~c~V~~~~~  107 (263)
T COG1179          29 KQAHVCVVGI-GGVGSWAVEALARSGIGRITLIDMDDVCVTNTNRQIHALLGDIGKPKVEVMKERIKQINPECEVTAIND  107 (263)
T ss_pred             hhCcEEEEec-CchhHHHHHHHHHcCCCeEEEEecccccccccchhhHhhhhhcccHHHHHHHHHHHhhCCCceEeehHh
Confidence            4678999995 9999999998888887 6666553211                   1111111   22221 1211111


Q ss_pred             CccHHHHHHhHCCCCccEEEeCCCc-hhHHHHHH-hhccCCEEEEEecccc
Q 028523           74 EPDLDAALKRYFPEGINIYFENVGG-KMLDAVLL-NMRIQGRITLCGMISQ  122 (208)
Q Consensus        74 ~~~~~~~~~~~~~~~~d~v~d~~g~-~~~~~~~~-~l~~~G~~v~~g~~~~  122 (208)
                      . =..+.+.++...++|+|+||... ..-...+. |.+.+=.++..+...+
T Consensus       108 f-~t~en~~~~~~~~~DyvIDaiD~v~~Kv~Li~~c~~~ki~vIss~Gag~  157 (263)
T COG1179         108 F-ITEENLEDLLSKGFDYVIDAIDSVRAKVALIAYCRRNKIPVISSMGAGG  157 (263)
T ss_pred             h-hCHhHHHHHhcCCCCEEEEchhhhHHHHHHHHHHHHcCCCEEeeccccC
Confidence            1 12233445555589999999995 33333334 5555556777666543

>PLN02520 bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase

Probab=96.40  E-value=0.032  Score=46.44  Aligned_cols=71  Identities=25%  Similarity=0.326  Sum_probs=50.0

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHHHHhHCCCCccEEEeCCC
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVG   97 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~d~v~d~~g   97 (208)
                      .+.+++|+|+ |++|.+++..+...|++|+++.++.++.+.+.+.++.. .+.+.   +..    +......|++++|++
T Consensus       378 ~~k~vlIlGa-GGagrAia~~L~~~G~~V~i~nR~~e~a~~la~~l~~~-~~~~~---~~~----~~~~~~~diiINtT~  448 (529)
T PLN02520        378 AGKLFVVIGA-GGAGKALAYGAKEKGARVVIANRTYERAKELADAVGGQ-ALTLA---DLE----NFHPEEGMILANTTS  448 (529)
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhCCc-eeeHh---Hhh----hhccccCeEEEeccc
Confidence            4678999997 89999999999999999999999888777766466432 22221   111    111124789998876

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	208
4hfj_A	351	X-ray Crystal Structure Of A Double Bond Reductase		5e-99
2j3h_A	345	Crystal Structure Of Arabidopsis Thaliana Double Bo		3e-88
4b7c_A	336	Crystal Structure Of Hypothetical Protein Pa1648 Fr		9e-48
1v3t_A	333	Crystal Structure Of Leukotriene B4 12- Hydroxydehy		1e-43
2y05_A	328	Crystal Structure Of Human Leukotriene B4 12-Hydrox		2e-40
1zsv_A	349	Crystal Structure Of Human Nadp-Dependent Leukotrie		2e-40
2zb4_A	357	Crystal Structure Of Human 15-Ketoprostaglandin Del		9e-29
2w4q_A	357	Crystal Structure Of Human Zinc-Binding Alcohol Deh		1e-28
2zb3_A	353	Crystal Structure Of Mouse 15-Ketoprostaglandin Del		9e-28
1vj1_A	363	Crystal Structure Of Putative Nadph-Dependent Oxido		5e-25
2c0c_A	362	Structure Of The Mgc45594 Gene Product Length = 362		2e-23
2x7h_A	370	Crystal Structure Of The Human Mgc45594 Gene Produc		2e-23
2wek_A	341	Crystal Structure Of The Human Mgc45594 Gene Produc		2e-23
2j8z_A	354	Crystal Structure Of Human P53 Inducible Oxidoreduc		1e-08
2oby_A	338	Crystal Structure Of Human P53 Inducible Oxidoreduc		1e-08
2eih_A	343	Crystal Structure Of Nad-Dependent Alcohol Dehydrog		5e-08
1yb5_A	351	Crystal Structure Of Human Zeta-crystallin With Bou		2e-07
4dup_A	353	Crystal Structure Of A Quinone Oxidoreductase From		3e-07
1wly_A	333	Crystal Structure Of 2-haloacrylate Reductase Lengt		4e-07
3qwa_A	334	Crystal Structure Of Saccharomyces Cerevisiae Zeta-		5e-06
2vz8_A	2512	Crystal Structure Of Mammalian Fatty Acid Synthase		4e-05
4a27_A	349	Crystal Structure Of Human Synaptic Vesicle Membran		9e-05
3uog_A	363	Crystal Structure Of Putative Alcohol Dehydrogenase		7e-04

>pdb|4HFJ|A Chain A, X-ray Crystal Structure Of A Double Bond Reductase From Nicotiana Tabacum Length = 351

Iteration: 1
 Score =  356 bits (913), Expect = 5e-99,   Method: Compositional matrix adjust.
 Identities = 171/208 (82%), Positives = 192/208 (92%)
Query: 1   MPGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLK 60
           MPGMTAYAGF EVCSPK+GE VFVSAASGAVGQLVGQFAK++GCYVVGSAGSK+KVDLLK
Sbjct: 136 MPGMTAYAGFHEVCSPKKGETVFVSAASGAVGQLVGQFAKMLGCYVVGSAGSKEKVDLLK 195
Query: 61  NKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVGGKMLDAVLLNMRIQGRITLCGMI 120
           +KFGFDEAFNYKEE DL AALKRYFP+GI+IYFENVGGKMLDAVL+NM++ GRI +CGMI
Sbjct: 196 SKFGFDEAFNYKEEQDLSAALKRYFPDGIDIYFENVGGKMLDAVLVNMKLYGRIAVCGMI 255
Query: 121 SQYNNDKPEGVHNLTCLISKRIRMEGFLVPDYFHLYPKFLEMMIPRIKEGKIVYVEDKAE 180
           SQYN ++ EGVHNL CLI+KRIRMEGFLV DY+HLYPK+LEM+IP+IK GK+VYVED A 
Sbjct: 256 SQYNLEQTEGVHNLFCLITKRIRMEGFLVFDYYHLYPKYLEMVIPQIKAGKVVYVEDVAH 315
Query: 181 GLESAPAALVGLFSGRNVGKQVVEVATE 208
           GLESAP ALVGLFSGRN+GKQVV V+ E
Sbjct: 316 GLESAPTALVGLFSGRNIGKQVVMVSRE 343

>pdb|2J3H|A Chain A, Crystal Structure Of Arabidopsis Thaliana Double Bond Reductase (At5g16970)-Apo Form Length = 345

Iteration: 1
 Score =  320 bits (821), Expect = 3e-88,   Method: Compositional matrix adjust.
 Identities = 155/208 (74%), Positives = 179/208 (86%)
Query: 1   MPGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLK 60
           MPGMTAYAGF+EVCSPK+GE V+VSAASGAVGQLVGQ AK++GCYVVGSAGSK+KVDLLK
Sbjct: 138 MPGMTAYAGFYEVCSPKEGETVYVSAASGAVGQLVGQLAKMMGCYVVGSAGSKEKVDLLK 197
Query: 61  NKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVGGKMLDAVLLNMRIQGRITLCGMI 120
            KFGFD+AFNYKEE DL AALKR FP GI+IYFENVGGKMLDAVL+NM + GRI +CGMI
Sbjct: 198 TKFGFDDAFNYKEESDLTAALKRCFPNGIDIYFENVGGKMLDAVLVNMNMHGRIAVCGMI 257
Query: 121 SQYNNDKPEGVHNLTCLISKRIRMEGFLVPDYFHLYPKFLEMMIPRIKEGKIVYVEDKAE 180
           SQYN +  EGVHNL+ +I KR R++GF+V D++  Y KFLE ++P I+EGKI YVED A+
Sbjct: 258 SQYNLENQEGVHNLSNIIYKRNRIQGFVVSDFYDKYSKFLEFVLPHIREGKITYVEDVAD 317
Query: 181 GLESAPAALVGLFSGRNVGKQVVEVATE 208
           GLE AP ALVGLF G+NVGKQVV VA E
Sbjct: 318 GLEKAPEALVGLFHGKNVGKQVVVVARE 345

>pdb|4B7C|A Chain A, Crystal Structure Of Hypothetical Protein Pa1648 From Pseudomonas Aeruginosa. Length = 336

Iteration: 1
 Score =  186 bits (472), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 101/206 (49%), Positives = 130/206 (63%), Gaps = 2/206 (0%)
Query: 1   MPGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLK 60
           M GMTAY    +V  PK GE V +S A+GAVG + GQ A+L GC VVG AG  +K   L 
Sbjct: 132 MTGMTAYFALLDVGQPKNGETVVISGAAGAVGSVAGQIARLKGCRVVGIAGGAEKCRFLV 191
Query: 61  NKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVGGKMLDAVLLNMRIQGRITLCGMI 120
            + GFD A +YK E DL A LKR  P+GI+++F+NVGG++LD VL  +  + RI LCG I
Sbjct: 192 EELGFDGAIDYKNE-DLAAGLKRECPKGIDVFFDNVGGEILDTVLTRIAFKARIVLCGAI 250
Query: 121 SQYNNDKP-EGVHNLTCLISKRIRMEGFLVPDYFHLYPKFLEMMIPRIKEGKIVYVEDKA 179
           SQYNN +   G  N   L+  R RMEG +V DY   +P+ L+ M   + EGK+   ED  
Sbjct: 251 SQYNNKEAVRGPANYLSLLVNRARMEGMVVMDYAQRFPEGLKEMATWLAEGKLQSREDIV 310
Query: 180 EGLESAPAALVGLFSGRNVGKQVVEV 205
           EGLE+ P  L+ LFSG N GK V++V
Sbjct: 311 EGLETFPETLLKLFSGENFGKLVLKV 336

>pdb|1V3T|A Chain A, Crystal Structure Of Leukotriene B4 12- Hydroxydehydrogenase15-Oxo-Prostaglandin 13-Reductase Length = 333

Iteration: 1
 Score =  172 bits (436), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 99/206 (48%), Positives = 134/206 (65%), Gaps = 5/206 (2%)
Query: 1   MPGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLK 60
           MPG+TAY G  EVC  K GE V VSAA+GAVG +VGQ AKL GC VVG+AGS +K+  LK
Sbjct: 128 MPGLTAYFGLLEVCGVKGGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAYLK 187
Query: 61  NKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVGGKMLDAVLLNMRIQGRITLCGMI 120
            + GFD AFNYK    L+ ALK+  P+G + YF+NVGG+ L+ VL  M+  G+I +CG I
Sbjct: 188 -QIGFDAAFNYKTVNSLEEALKKASPDGYDCYFDNVGGEFLNTVLSQMKDFGKIAICGAI 246
Query: 121 SQYN--NDKPEGVHNLTCLISKRIRMEGFLVPDYF-HLYPKFLEMMIPRIKEGKIVYVED 177
           S YN  +  P G  +   +I K++R+EGF+V  +   +  K L  ++  + EGKI Y E 
Sbjct: 247 SVYNRMDQLPPG-PSPESIIYKQLRIEGFIVYRWQGDVREKALRDLMKWVLEGKIQYHEH 305
Query: 178 KAEGLESAPAALVGLFSGRNVGKQVV 203
             +G E+ PAA + + +G N+GK VV
Sbjct: 306 VTKGFENMPAAFIEMLNGANLGKAVV 331

>pdb|2Y05|A Chain A, Crystal Structure Of Human Leukotriene B4 12-Hydroxydehydrogenase In Complex With Nadp And Raloxifene Length = 328

Iteration: 1
 Score =  162 bits (409), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 93/206 (45%), Positives = 126/206 (61%), Gaps = 3/206 (1%)
Query: 1   MPGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLK 60
           MPG+TAY G  E+C  K GE V V+AA+GAVG +VGQ AKL GC VVG+ GS +KV  L+
Sbjct: 123 MPGLTAYFGLLEICGVKGGETVMVNAAAGAVGSVVGQIAKLKGCKVVGAVGSDEKVAYLQ 182
Query: 61  NKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVGGKMLDAVLLNMRIQGRITLCGMI 120
            K GFD  FNYK    L+  LK+  P+G + YF+NVGG+  + V+  M+  GRI +CG I
Sbjct: 183 -KLGFDVVFNYKTVESLEETLKKASPDGYDCYFDNVGGEFSNTVIGQMKKFGRIAICGAI 241
Query: 121 SQYNNDKPEGVHNLT-CLISKRIRMEGFLVPDYF-HLYPKFLEMMIPRIKEGKIVYVEDK 178
           S YN   P         +I + +RME F+V  +      K L+ ++  + EGKI Y E  
Sbjct: 242 STYNRTGPLPPGPPPEIVIYQELRMEAFVVYRWQGDARQKALKDLLKWVLEGKIQYKEYI 301
Query: 179 AEGLESAPAALVGLFSGRNVGKQVVE 204
            EG E+ PAA +G+  G N+GK +V+
Sbjct: 302 IEGFENMPAAFMGMLKGDNLGKTIVK 327

>pdb|1ZSV|A Chain A, Crystal Structure Of Human Nadp-Dependent Leukotriene B4 12- Hydroxydehydrogenase Length = 349

Iteration: 1
 Score =  162 bits (409), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 93/206 (45%), Positives = 126/206 (61%), Gaps = 3/206 (1%)
Query: 1   MPGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLK 60
           MPG+TAY G  E+C  K GE V V+AA+GAVG +VGQ AKL GC VVG+ GS +KV  L+
Sbjct: 144 MPGLTAYFGLLEICGVKGGETVMVNAAAGAVGSVVGQIAKLKGCKVVGAVGSDEKVAYLQ 203
Query: 61  NKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVGGKMLDAVLLNMRIQGRITLCGMI 120
            K GFD  FNYK    L+  LK+  P+G + YF+NVGG+  + V+  M+  GRI +CG I
Sbjct: 204 -KLGFDVVFNYKTVESLEETLKKASPDGYDCYFDNVGGEFSNTVIGQMKKFGRIAICGAI 262
Query: 121 SQYNNDKPEGVHNLT-CLISKRIRMEGFLVPDYF-HLYPKFLEMMIPRIKEGKIVYVEDK 178
           S YN   P         +I + +RME F+V  +      K L+ ++  + EGKI Y E  
Sbjct: 263 STYNRTGPLPPGPPPEIVIYQELRMEAFVVYRWQGDARQKALKDLLKWVLEGKIQYKEYI 322
Query: 179 AEGLESAPAALVGLFSGRNVGKQVVE 204
            EG E+ PAA +G+  G N+GK +V+
Sbjct: 323 IEGFENMPAAFMGMLKGDNLGKTIVK 348

>pdb|2ZB4|A Chain A, Crystal Structure Of Human 15-Ketoprostaglandin Delta-13- Reductase In Complex With Nadp And 15-Keto-Pge2 Length = 357

Iteration: 1
 Score =  123 bits (308), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 78/220 (35%), Positives = 114/220 (51%), Gaps = 18/220 (8%)
Query: 1   MPGMTAYAGFFEVCSPKQG--EYVFVSAASGAVGQLVGQFAKLVGCY-VVGSAGSKDKVD 57
           MPG+T+  G  E      G  + + VS A+GA G + GQ    +GC  VVG  G+ +K  
Sbjct: 141 MPGLTSLIGIQEKGHITAGSNKTMVVSGAAGACGSVAGQIGHFLGCSRVVGICGTHEKCI 200
Query: 58  LLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVGGKMLDAVLLNMRIQGRITLC 117
           LL ++ GFD A NYK++ ++   L+   P G+++YF+NVGG + D V+  M     I LC
Sbjct: 201 LLTSELGFDAAINYKKD-NVAEQLRESCPAGVDVYFDNVGGNISDTVISQMNENSHIILC 259
Query: 118 GMISQYNNDKP---------EGVHNLTCLISKRIRMEGFLVPDYFHLYPKFLEMMIPRIK 168
           G ISQYN D P         E +        + I  E FLV +Y   +   +  +    K
Sbjct: 260 GQISQYNKDVPYPPPLSPAIEAIQK-----ERNITRERFLVLNYKDKFEPGILQLSQWFK 314
Query: 169 EGKIVYVEDKAEGLESAPAALVGLFSGRNVGKQVVEVATE 208
           EGK+   E    GLE+  AA   + +G N+GKQ+V ++ E
Sbjct: 315 EGKLKIKETVINGLENMGAAFQSMMTGGNIGKQIVCISEE 354

>pdb|2W4Q|A Chain A, Crystal Structure Of Human Zinc-Binding Alcohol Dehydrogenase 1 (Zadh1) In Ternary Complex With Nadp And 18beta-Glycyrrhetinic Acid Length = 357

Iteration: 1
 Score =  122 bits (306), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 78/220 (35%), Positives = 114/220 (51%), Gaps = 18/220 (8%)
Query: 1   MPGMTAYAGFFEVCSPKQG--EYVFVSAASGAVGQLVGQFAKLVGC-YVVGSAGSKDKVD 57
           MPG+T+  G  E      G  + + VS A+GA G + GQ    +GC  VVG  G+ +K  
Sbjct: 136 MPGLTSLIGIQEKGHITAGSNKTMVVSGAAGACGSVAGQIGHFLGCSRVVGICGTHEKCI 195
Query: 58  LLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVGGKMLDAVLLNMRIQGRITLC 117
           LL ++ GFD A NYK++ ++   L+   P G+++YF+NVGG + D V+  M     I LC
Sbjct: 196 LLTSELGFDAAINYKKD-NVAEQLRESCPAGVDVYFDNVGGNISDTVISQMNENSHIILC 254
Query: 118 GMISQYNNDKP---------EGVHNLTCLISKRIRMEGFLVPDYFHLYPKFLEMMIPRIK 168
           G ISQYN D P         E +        + I  E FLV +Y   +   +  +    K
Sbjct: 255 GQISQYNKDVPYPPPLSPAIEAIQK-----ERNITRERFLVLNYKDKFEPGILQLSQWFK 309
Query: 169 EGKIVYVEDKAEGLESAPAALVGLFSGRNVGKQVVEVATE 208
           EGK+   E    GLE+  AA   + +G N+GKQ+V ++ E
Sbjct: 310 EGKLKIKETVINGLENMGAAFQSMMTGGNIGKQIVCISEE 349

>pdb|2ZB3|A Chain A, Crystal Structure Of Mouse 15-Ketoprostaglandin Delta-13- Reductase In Complex With Nadph Length = 353

Iteration: 1
 Score =  119 bits (299), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 78/215 (36%), Positives = 115/215 (53%), Gaps = 8/215 (3%)
Query: 1   MPGMTAYAGFFEV--CSPKQGEYVFVSAASGAVGQLVGQFAKLVGCY-VVGSAGSKDKVD 57
           MPG+T+  G  E    S    + + VS A+GA G L GQ   L+GC  VVG  G+++K  
Sbjct: 137 MPGLTSLIGVQEKGHISAGSNQTMVVSGAAGACGSLAGQIGHLLGCSRVVGICGTQEKCL 196
Query: 58  LLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVGGKMLDAVLLNMRIQGRITLC 117
            L ++ GFD A NYK   ++   L+   P G+++YF+NVGG + +AV+  M     I LC
Sbjct: 197 FLTSELGFDAAVNYKT-GNVAEQLREACPGGVDVYFDNVGGDISNAVISQMNENSHIILC 255
Query: 118 GMISQYNNDKPEGVHNLTCLISKR----IRMEGFLVPDYFHLYPKFLEMMIPRIKEGKIV 173
           G ISQY+ND P        + + R    I  E F V +Y   +   +  +    KEGK+ 
Sbjct: 256 GQISQYSNDVPYPPPLPPAVEAIRKERNITRERFTVLNYKDKFEPGILQLSQWFKEGKLK 315
Query: 174 YVEDKAEGLESAPAALVGLFSGRNVGKQVVEVATE 208
             E  A+GLE+   A   + +G NVGKQ+V ++ +
Sbjct: 316 VKETMAKGLENMGVAFQSMMTGGNVGKQIVCISED 350

>pdb|1VJ1|A Chain A, Crystal Structure Of Putative Nadph-Dependent Oxidoreductase From Mus Musculus At 2.10 A Resolution Length = 363

Iteration: 1
 Score =  110 bits (275), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 75/214 (35%), Positives = 109/214 (50%), Gaps = 8/214 (3%)
Query: 2   PGMTAYAGFFEV--CSPKQGEYVFVSAASGAVGQLVGQFAKLVGCY-VVGSAGSKDKVDL 58
           PG+T+  G  E    S    +   VS A+GA G L GQ   L+GC  VVG  G+++K   
Sbjct: 148 PGLTSLIGVQEKGHISAGSNQTXVVSGAAGACGSLAGQIGHLLGCSRVVGICGTQEKCLF 207
Query: 59  LKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVGGKMLDAVLLNMRIQGRITLCG 118
           L ++ GFD A NYK   ++   L+   P G+++YF+NVGG + + V+        I LCG
Sbjct: 208 LTSELGFDAAVNYKT-GNVAEQLREACPGGVDVYFDNVGGDISNTVISQXNENSHIILCG 266
Query: 119 MISQYNNDKPEGVHNLTCLISKR----IRMEGFLVPDYFHLYPKFLEMMIPRIKEGKIVY 174
            ISQYN D P        + + R    I  E F V +Y   +   +  +    KEGK+  
Sbjct: 267 QISQYNKDVPYPPPLPPAVEAIRKERNITRERFTVLNYKDKFEPGILQLSQWFKEGKLKV 326
Query: 175 VEDKAEGLESAPAALVGLFSGRNVGKQVVEVATE 208
            E  A+GLE+   A     +G NVGKQ+V ++ +
Sbjct: 327 KETVAKGLENXGVAFQSXXTGGNVGKQIVCISED 360

>pdb|2C0C|A Chain A, Structure Of The Mgc45594 Gene Product Length = 362

Iteration: 1
 Score =  105 bits (262), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 69/217 (31%), Positives = 109/217 (50%), Gaps = 18/217 (8%)
Query: 3   GMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNK 62
           G TAY    E+    +G+ V V+AA+G  GQ   Q +K   C+V+G+  S +K   LK+ 
Sbjct: 148 GTTAYISLKELGGLSEGKKVLVTAAAGGTGQFAMQLSKKAKCHVIGTCSSDEKSAFLKS- 206
Query: 63  FGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVGGKMLDAVLLNMRIQGRITLCGMISQ 122
            G D   NYK EP +   LK+ +PEG+++ +E+VGG M D  +  +  +GR+ + G IS 
Sbjct: 207 LGCDRPINYKTEP-VGTVLKQEYPEGVDVVYESVGGAMFDLAVDALATKGRLIVIGFISG 265
Query: 123 YNNDKPEGVHNLTC------LISKRIRMEGFLVPDYFHLYPKFLEMMIPRIKEGKIV--- 173
           Y    P G+  +        L+ K   ++GF +  Y   Y   +  ++     G +V   
Sbjct: 266 YQT--PTGLSPVKAGTLPAKLLKKSASVQGFFLNHYLSKYQAAMSHLLEMCVSGDLVCEV 323
Query: 174 -----YVEDKAEGLESAPAALVGLFSGRNVGKQVVEV 205
                  E +  GLES   A+  ++ G+N GK VVE+
Sbjct: 324 DLGDLSPEGRFTGLESIFRAVNYMYMGKNTGKIVVEL 360

>pdb|2X7H|A Chain A, Crystal Structure Of The Human Mgc45594 Gene Product In Complex With Fenoprofen Length = 370

Iteration: 1
 Score =  105 bits (262), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 69/217 (31%), Positives = 109/217 (50%), Gaps = 18/217 (8%)
Query: 3   GMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNK 62
           G TAY    E+    +G+ V V+AA+G  GQ   Q +K   C+V+G+  S +K   LK+ 
Sbjct: 156 GTTAYISLKELGGLSEGKKVLVTAAAGGTGQFAMQLSKKAKCHVIGTCSSDEKSAFLKS- 214
Query: 63  FGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVGGKMLDAVLLNMRIQGRITLCGMISQ 122
            G D   NYK EP +   LK+ +PEG+++ +E+VGG M D  +  +  +GR+ + G IS 
Sbjct: 215 LGCDRPINYKTEP-VGTVLKQEYPEGVDVVYESVGGAMFDLAVDALATKGRLIVIGFISG 273
Query: 123 YNNDKPEGVHNLTC------LISKRIRMEGFLVPDYFHLYPKFLEMMIPRIKEGKIV--- 173
           Y    P G+  +        L+ K   ++GF +  Y   Y   +  ++     G +V   
Sbjct: 274 YQT--PTGLSPVKAGTLPAKLLKKSASVQGFFLNHYLSKYQAAMSHLLEMCVSGDLVCEV 331
Query: 174 -----YVEDKAEGLESAPAALVGLFSGRNVGKQVVEV 205
                  E +  GLES   A+  ++ G+N GK VVE+
Sbjct: 332 DLGDLSPEGRFTGLESIFRAVNYMYMGKNTGKIVVEL 368

>pdb|2WEK|A Chain A, Crystal Structure Of The Human Mgc45594 Gene Product In Complex With Diclofenac Length = 341

Iteration: 1
 Score =  105 bits (262), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 69/217 (31%), Positives = 109/217 (50%), Gaps = 18/217 (8%)
Query: 3   GMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNK 62
           G TAY    E+    +G+ V V+AA+G  GQ   Q +K   C+V+G+  S +K   LK+ 
Sbjct: 127 GTTAYISLKELGGLSEGKKVLVTAAAGGTGQFAMQLSKKAKCHVIGTCSSDEKSAFLKS- 185
Query: 63  FGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVGGKMLDAVLLNMRIQGRITLCGMISQ 122
            G D   NYK EP +   LK+ +PEG+++ +E+VGG M D  +  +  +GR+ + G IS 
Sbjct: 186 LGCDRPINYKTEP-VGTVLKQEYPEGVDVVYESVGGAMFDLAVDALATKGRLIVIGFISG 244
Query: 123 YNNDKPEGVHNLTC------LISKRIRMEGFLVPDYFHLYPKFLEMMIPRIKEGKIV--- 173
           Y    P G+  +        L+ K   ++GF +  Y   Y   +  ++     G +V   
Sbjct: 245 YQT--PTGLSPVKAGTLPAKLLKKSASVQGFFLNHYLSKYQAAMSHLLEMCVSGDLVCEV 302
Query: 174 -----YVEDKAEGLESAPAALVGLFSGRNVGKQVVEV 205
                  E +  GLES   A+  ++ G+N GK VVE+
Sbjct: 303 DLGDLSPEGRFTGLESIFRAVNYMYMGKNTGKIVVEL 339

>pdb|2J8Z|A Chain A, Crystal Structure Of Human P53 Inducible Oxidoreductase ( Tp53i3,Pig3) Length = 354

Iteration: 1
 Score = 56.2 bits (134), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 53/214 (24%), Positives = 96/214 (44%), Gaps = 21/214 (9%)
Query: 4   MTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKF 63
           +TA+     V + + G+YV + A    VG    Q  ++ G   + +AGS+ K+ + + K 
Sbjct: 148 LTAFQLLHLVGNVQAGDYVLIHAGLSGVGTAAIQLTRMAGAIPLVTAGSQKKLQMAE-KL 206
Query: 64  GFDEAFNYKEEPDLDAALKRYFPEGINIYFENVGGKMLDAVLLNMRIQGRITLCGMISQY 123
           G    FNYK+E   +A LK     G+N+  + +GG   +  +  + + GR  L G++   
Sbjct: 207 GAAAGFNYKKEDFSEATLKFTKGAGVNLILDCIGGSYWEKNVNCLALDGRWVLYGLMGGG 266
Query: 124 NNDKPEGVHNLTCLISKRIRMEGFLVPDYFH---------LYPKFLEMMIPRIK-EG--K 171
           + + P        L SK +   G L+              L   F E ++P    EG  +
Sbjct: 267 DINGP--------LFSKLLFKRGSLITSLLRSRDNKYKQMLVNAFTEQILPHFSTEGPQR 318
Query: 172 IVYVEDKAEGLESAPAALVGLFSGRNVGKQVVEV 205
           ++ V D+   +     A   + + +N+GK V+E+
Sbjct: 319 LLPVLDRIYPVTEIQEAHKYMEANKNIGKIVLEL 352

>pdb|2OBY|A Chain A, Crystal Structure Of Human P53 Inducible Oxidoreductase (Tp53i3,Pig3) Length = 338

Iteration: 1
 Score = 56.2 bits (134), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 53/214 (24%), Positives = 96/214 (44%), Gaps = 21/214 (9%)
Query: 4   MTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKF 63
           +TA+     V + + G+YV + A    VG    Q  ++ G   + +AGS+ K+ + + K 
Sbjct: 132 LTAFQLLHLVGNVQAGDYVLIHAGLSGVGTAAIQLTRMAGAIPLVTAGSQKKLQMAE-KL 190
Query: 64  GFDEAFNYKEEPDLDAALKRYFPEGINIYFENVGGKMLDAVLLNMRIQGRITLCGMISQY 123
           G    FNYK+E   +A LK     G+N+  + +GG   +  +  + + GR  L G++   
Sbjct: 191 GAAAGFNYKKEDFSEATLKFTKGAGVNLILDCIGGSYWEKNVNCLALDGRWVLYGLMGGG 250
Query: 124 NNDKPEGVHNLTCLISKRIRMEGFLVPDYFH---------LYPKFLEMMIPRIK-EG--K 171
           + + P        L SK +   G L+              L   F E ++P    EG  +
Sbjct: 251 DINGP--------LFSKLLFKRGSLITSLLRSRDNKYKQMLVNAFTEQILPHFSTEGPQR 302
Query: 172 IVYVEDKAEGLESAPAALVGLFSGRNVGKQVVEV 205
           ++ V D+   +     A   + + +N+GK V+E+
Sbjct: 303 LLPVLDRIYPVTEIQEAHKYMEANKNIGKIVLEL 336

>pdb|2EIH|A Chain A, Crystal Structure Of Nad-Dependent Alcohol Dehydrogenase Length = 343

Iteration: 1
 Score = 54.3 bits (129), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 49/181 (27%), Positives = 81/181 (44%), Gaps = 10/181 (5%)
Query: 4   MTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKF 63
           +TA+    +    + G+ V V AA   V     Q AKL G  V+ +AGS+DK+   K   
Sbjct: 152 LTAWQMVVDKLGVRPGDDVLVMAAGSGVSVAAIQIAKLFGARVIATAGSEDKLRRAK-AL 210
Query: 64  GFDEAFNYKEEPDLDAALKRYF-PEGINIYFENVGGKMLDAVLLNMRIQGRITLCGMISQ 122
           G DE  NY   PD    ++R    +G +   ++ G    + V+      GRI + G  S 
Sbjct: 211 GADETVNYT-HPDWPKEVRRLTGGKGADKVVDHTGALYFEGVIKATANGGRIAIAGASSG 269
Query: 123 YNNDKPEGVHNLTCLISKRIRMEGFLVPDYFHLYP--KFLEMMIPRIKEGKIVYVEDKAE 180
           Y     EG      +  +++ + G  +     L+P  +F+E    +   G+++ +E  AE
Sbjct: 270 Y-----EGTLPFAHVFYRQLSILGSTMASKSRLFPILRFVEEGKLKPVVGQVLPLEAAAE 324
Query: 181 G 181
           G
Sbjct: 325 G 325

>pdb|1YB5|A Chain A, Crystal Structure Of Human Zeta-crystallin With Bound Nadp Length = 351

Iteration: 1
 Score = 52.4 bits (124), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 40/120 (33%), Positives = 60/120 (50%), Gaps = 5/120 (4%)
Query: 1   MPGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDL-L 59
           +P  TAY         K GE V V  ASG VG    Q A+  G  ++G+AG+++   + L
Sbjct: 153 IPYFTAYRALIHSACVKAGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQKIVL 212
Query: 60  KNKFGFDEAFNYKEEPDLDAALKRYFPE-GINIYFENVGGKMLDAVLLNMRIQGRITLCG 118
           +N  G  E FN++E   +D  +K+Y  E GI+I  E +    L   L  +   GR+ + G
Sbjct: 213 QN--GAHEVFNHREVNYID-KIKKYVGEKGIDIIIEMLANVNLSKDLSLLSHGGRVIVVG 269

>pdb|4DUP|A Chain A, Crystal Structure Of A Quinone Oxidoreductase From Rhizobium Etli Cfn 42 Length = 353

Iteration: 1
 Score = 51.6 bits (122), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 50/208 (24%), Positives = 84/208 (40%), Gaps = 15/208 (7%)
Query: 5   TAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFG 64
           T +A  F+     +GE V +   +  +G    Q A+  G  V  +AGS  K +  + + G
Sbjct: 154 TVWANLFQXAGLTEGESVLIHGGTSGIGTTAIQLARAFGAEVYATAGSTGKCEACE-RLG 212
Query: 65  FDEAFNYKEEPDLDAALKRYFPEGINIYFENVGGKMLDAVLLNMRIQGRIT----LCGMI 120
                NY+ E D  A +K    +G++I  + +G    +  + ++   G ++    L G +
Sbjct: 213 AKRGINYRSE-DFAAVIKAETGQGVDIILDXIGAAYFERNIASLAKDGCLSIIAFLGGAV 271
Query: 121 SQYNNDKPEGVHNLTCLISK---RIRMEGFLVPDYFHLYPKFLEMMIPRIKEGKIVYVED 177
           ++  N  P  V  LT   S    R   E   + D        L  + P ++ G +  V  
Sbjct: 272 AEKVNLSPIXVKRLTVTGSTXRPRTAEEKRAIRD------DLLSEVWPLLEAGTVAPVIH 325
Query: 178 KAEGLESAPAALVGLFSGRNVGKQVVEV 205
           K    E    A   L  G +VGK  + V
Sbjct: 326 KVFAFEDVADAHRLLEEGSHVGKVXLTV 353

>pdb|1WLY|A Chain A, Crystal Structure Of 2-haloacrylate Reductase Length = 333

Iteration: 1
 Score = 51.2 bits (121), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 29/121 (23%), Positives = 60/121 (49%), Gaps = 1/121 (0%)
Query: 1   MPGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLK 60
           + GMTA     +    K G+YV + AA+G +G ++  +A+ +G  V+G+  +++K +  +
Sbjct: 128 LKGMTAQYLLHQTHKVKPGDYVLIHAAAGGMGHIMVPWARHLGATVIGTVSTEEKAETAR 187
Query: 61  NKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVGGKMLDAVLLNMRIQGRITLCGMI 120
            K G     NY  +   +   +    +G+++ ++++G   L   L  +R +G     G  
Sbjct: 188 -KLGCHHTINYSTQDFAEVVREITGGKGVDVVYDSIGKDTLQKSLDCLRPRGMCAAYGHA 246
Query: 121 S 121
           S
Sbjct: 247 S 247

>pdb|3QWA|A Chain A, Crystal Structure Of Saccharomyces Cerevisiae Zeta-Crystallin-Like Quinone Oxidoreductase Zta1 Length = 334

Iteration: 1
 Score = 47.4 bits (111), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 30/109 (27%), Positives = 58/109 (53%), Gaps = 1/109 (0%)
Query: 4   MTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKF 63
           +TA +   E    K+G+YV + AA+G VG ++ Q  K+ G + +  A + +K+ + K ++
Sbjct: 134 LTALSFTNEAYHVKKGDYVLLFAAAGGVGLILNQLLKMKGAHTIAVASTDEKLKIAK-EY 192
Query: 64  GFDEAFNYKEEPDLDAALKRYFPEGINIYFENVGGKMLDAVLLNMRIQG 112
           G +   N  +E  L   LK    +G++  F++VG    +  L  ++ +G
Sbjct: 193 GAEYLINASKEDILRQVLKFTNGKGVDASFDSVGKDTFEISLAALKRKG 241

>pdb|2VZ8|A Chain A, Crystal Structure Of Mammalian Fatty Acid Synthase Length = 2512

Iteration: 1
 Score = 44.7 bits (104), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 50/212 (23%), Positives = 86/212 (40%), Gaps = 14/212 (6%)
Query: 5    TAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKF- 63
            TAY         + GE V + + SG VGQ     A   GC V  + GS +K   L+ +F 
Sbjct: 1654 TAYYSLVVRGRMQPGESVLIHSGSGGVGQAAIAIALSRGCRVFTTVGSAEKRAYLQARFP 1713
Query: 64   GFDEA--FNYKEEPDLDAALKRYFPEGINIYFENVGGKMLDAVLLNMRIQGRITLCGMIS 121
              DE    N ++       L+    +G+++   ++  + L A +  +   GR    G   
Sbjct: 1714 QLDETCFANSRDTSFEQHVLRHTAGKGVDLVLNSLAEEKLQASVRCLAQHGRFLEIGKFD 1773
Query: 122  QYNNDKPEGVHNL-TCLISKRIRMEGFLVPDYFH----LYPKFLEMMIPRIKEGKIVYVE 176
              NN      H L   +  K +   G L+   F      + +  E++   I+EG +  ++
Sbjct: 1774 LSNN------HALGMAVFLKNVTFHGILLDSLFEEGGATWQEVSELLKAGIQEGVVQPLK 1827
Query: 177  DKAEGLESAPAALVGLFSGRNVGKQVVEVATE 208
                      AA   +  G+++GK V++V  E
Sbjct: 1828 CTVFPRTKVEAAFRYMAQGKHIGKVVIQVREE 1859

>pdb|4A27|A Chain A, Crystal Structure Of Human Synaptic Vesicle Membrane Protein Vat-1 Homolog-Like Protein Length = 349

Iteration: 1
 Score = 43.5 bits (101), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 31/97 (31%), Positives = 46/97 (47%), Gaps = 8/97 (8%)
Query: 4   MTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKF 63
           +TAY   FEV + ++G  V V +A G VGQ V Q    V    V    S  K + +K+  
Sbjct: 128 VTAYVMLFEVANLREGMSVLVHSAGGGVGQAVAQLCSTVPNVTVFGTASTFKHEAIKDSV 187
Query: 64  G--FDEAFNYKEEPDLDAALKRYFPEGINIYFENVGG 98
              FD   +Y +E      +KR   EG++I  + + G
Sbjct: 188 THLFDRNADYVQE------VKRISAEGVDIVLDCLCG 218

>pdb|3UOG|A Chain A, Crystal Structure Of Putative Alcohol Dehydrogenase From Sinorhizobium Meliloti 1021 Length = 363

Iteration: 1
 Score = 40.4 bits (93), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 34/128 (26%), Positives = 54/128 (42%), Gaps = 2/128 (1%)
Query: 3   GMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNK 62
           G+TA+    E    + G+ V V   +G V     Q AK  G  V+ ++ S++K+D     
Sbjct: 174 GLTAWFALVEKGHLRAGDRVVVQG-TGGVALFGLQIAKATGAEVIVTSSSREKLDR-AFA 231
Query: 63  FGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVGGKMLDAVLLNMRIQGRITLCGMISQ 122
            G D   N  EE  ++         G +   E  GG  L   L  +   GRI++ G++  
Sbjct: 232 LGADHGINRLEEDWVERVYALTGDRGADHILEIAGGAGLGQSLKAVAPDGRISVIGVLEG 291
Query: 123 YNNDKPEG 130
           +    P G
Sbjct: 292 FEVSGPVG 299

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	208
2j3h_A	345	NADP-dependent oxidoreductase P1; double bond redu	1e-135
1v3u_A	333	Leukotriene B4 12- hydroxydehydrogenase/prostaglan	1e-123
2zb4_A	357	Prostaglandin reductase 2; rossmann fold, alternat	1e-118
2c0c_A	362	Zinc binding alcohol dehydrogenase, domain contain	1e-82
4dup_A	353	Quinone oxidoreductase; PSI-biology, structural ge	5e-27
3pi7_A	349	NADH oxidoreductase; groes-like fold, NAD(P)-bindi	3e-26
2eih_A	343	Alcohol dehydrogenase; zinc ION binding protein, s	8e-26
4a0s_A	447	Octenoyl-COA reductase/carboxylase; oxidoreductase	1e-23
3krt_A	456	Crotonyl COA reductase; structural genomics, prote	2e-23
4a27_A	349	Synaptic vesicle membrane protein VAT-1 homolog-L;	2e-22
1zsy_A	357	Mitochondrial 2-enoyl thioester reductase; medium-	4e-22
3uog_A	363	Alcohol dehydrogenase; structural genomics, protei	4e-22
3qwb_A	334	Probable quinone oxidoreductase; rossmann fold, qu	1e-21
2j8z_A	354	Quinone oxidoreductase; medium-chain dehydrogenase	1e-21
1wly_A	333	CAAR, 2-haloacrylate reductase; NADPH-dependent ox	4e-20
1gu7_A	364	Enoyl-[acyl-carrier-protein] reductase [NADPH, B-s	5e-20
4eye_A	342	Probable oxidoreductase; structural genomics, niai	2e-19
3jyn_A	325	Quinone oxidoreductase; rossmann fold, protein-NAD	3e-19
1yb5_A	351	Quinone oxidoreductase; medium-chain dehydrogenase	5e-19
1qor_A	327	Quinone oxidoreductase; HET: NAP; 2.20A {Escherich	9e-19
3gaz_A	343	Alcohol dehydrogenase superfamily protein; oxidore	1e-18
3gms_A	340	Putative NADPH:quinone reductase; structural genom	1e-18
3gqv_A	371	Enoyl reductase; medium-chain reductase (MDR super	2e-17
3tqh_A	321	Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella	2e-17
2vn8_A	375	Reticulon-4-interacting protein 1; mitochondrion,	9e-17
3fbg_A	346	Putative arginate lyase; structural genomics, unkn	2e-16
3iup_A	379	Putative NADPH:quinone oxidoreductase; YP_296108.1	2e-15
1iz0_A	302	Quinone oxidoreductase; APO-enzyme, riken structur	3e-15
4dvj_A	363	Putative zinc-dependent alcohol dehydrogenase Pro;	3e-13
3goh_A	315	Alcohol dehydrogenase, zinc-containing; NP_718042.	1e-11
1jvb_A	347	NAD(H)-dependent alcohol dehydrogenase; archaeon,	3e-11
1pqw_A	198	Polyketide synthase; rossmann fold, dimer, structu	3e-09
2vz8_A	2512	Fatty acid synthase; transferase, phosphopantethei	2e-08
2d8a_A	348	PH0655, probable L-threonine 3-dehydrogenase; pyro	8e-08
3slk_A	795	Polyketide synthase extender module 2; rossmann fo	6e-07
2dq4_A	343	L-threonine 3-dehydrogenase; NAD-dependent, oxidor	8e-07
3nx4_A	324	Putative oxidoreductase; csgid, structural genomic	1e-06
4a2c_A	346	Galactitol-1-phosphate 5-dehydrogenase; oxidoreduc	4e-06
1xa0_A	328	Putative NADPH dependent oxidoreductases; structur	9e-06
3ip1_A	404	Alcohol dehydrogenase, zinc-containing; structural	1e-05
1tt7_A	330	YHFP; alcohol dehydrogenase, Zn-dependent, NAD, st	1e-05
4ej6_A	370	Putative zinc-binding dehydrogenase; structural ge	2e-05
1vj0_A	380	Alcohol dehydrogenase, zinc-containing; TM0436, st	5e-05
2hcy_A	347	Alcohol dehydrogenase 1; tetramer of asymmetric di	1e-04
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	4e-04
2h6e_A	344	ADH-4, D-arabinose 1-dehydrogenase; rossman fold,	4e-04

>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A* Length = 345

 Score =  381 bits (981), Expect = e-135
 Identities = 155/208 (74%), Positives = 179/208 (86%)

Query: 1   MPGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLK 60
           MPGMTAYAGF+EVCSPK+GE V+VSAASGAVGQLVGQ AK++GCYVVGSAGSK+KVDLLK
Sbjct: 138 MPGMTAYAGFYEVCSPKEGETVYVSAASGAVGQLVGQLAKMMGCYVVGSAGSKEKVDLLK 197

Query: 61  NKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVGGKMLDAVLLNMRIQGRITLCGMI 120
            KFGFD+AFNYKEE DL AALKR FP GI+IYFENVGGKMLDAVL+NM + GRI +CGMI
Sbjct: 198 TKFGFDDAFNYKEESDLTAALKRCFPNGIDIYFENVGGKMLDAVLVNMNMHGRIAVCGMI 257

Query: 121 SQYNNDKPEGVHNLTCLISKRIRMEGFLVPDYFHLYPKFLEMMIPRIKEGKIVYVEDKAE 180
           SQYN +  EGVHNL+ +I KR R++GF+V D++  Y KFLE ++P I+EGKI YVED A+
Sbjct: 258 SQYNLENQEGVHNLSNIIYKRNRIQGFVVSDFYDKYSKFLEFVLPHIREGKITYVEDVAD 317

Query: 181 GLESAPAALVGLFSGRNVGKQVVEVATE 208
           GLE AP ALVGLF G+NVGKQVV VA E
Sbjct: 318 GLEKAPEALVGLFHGKNVGKQVVVVARE 345

>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A* Length = 333

 Score =  350 bits (901), Expect = e-123
 Identities = 98/205 (47%), Positives = 133/205 (64%), Gaps = 3/205 (1%)

Query: 1   MPGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLK 60
           MPG+TAY G  EVC  K GE V VSAA+GAVG +VGQ AKL GC VVG+AGS +K+  LK
Sbjct: 128 MPGLTAYFGLLEVCGVKGGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAYLK 187

Query: 61  NKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVGGKMLDAVLLNMRIQGRITLCGMI 120
            + GFD AFNYK    L+ ALK+  P+G + YF+NVGG+ L+ VL  M+  G+I +CG I
Sbjct: 188 -QIGFDAAFNYKTVNSLEEALKKASPDGYDCYFDNVGGEFLNTVLSQMKDFGKIAICGAI 246

Query: 121 SQYNN-DKPEGVHNLTCLISKRIRMEGFLVPDYF-HLYPKFLEMMIPRIKEGKIVYVEDK 178
           S YN  D+     +   +I K++R+EGF+V  +   +  K L  ++  + EGKI Y E  
Sbjct: 247 SVYNRMDQLPPGPSPESIIYKQLRIEGFIVYRWQGDVREKALRDLMKWVLEGKIQYHEHV 306

Query: 179 AEGLESAPAALVGLFSGRNVGKQVV 203
            +G E+ PAA + + +G N+GK VV
Sbjct: 307 TKGFENMPAAFIEMLNGANLGKAVV 331

>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A* Length = 357

 Score =  338 bits (869), Expect = e-118
 Identities = 77/215 (35%), Positives = 112/215 (52%), Gaps = 8/215 (3%)

Query: 1   MPGMTAYAGFFEVCSPKQG--EYVFVSAASGAVGQLVGQFAKLVGCY-VVGSAGSKDKVD 57
           MPG+T+  G  E      G  + + VS A+GA G + GQ    +GC  VVG  G+ +K  
Sbjct: 141 MPGLTSLIGIQEKGHITAGSNKTMVVSGAAGACGSVAGQIGHFLGCSRVVGICGTHEKCI 200

Query: 58  LLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVGGKMLDAVLLNMRIQGRITLC 117
           LL ++ GFD A NYK++ ++   L+   P G+++YF+NVGG + D V+  M     I LC
Sbjct: 201 LLTSELGFDAAINYKKD-NVAEQLRESCPAGVDVYFDNVGGNISDTVISQMNENSHIILC 259

Query: 118 GMISQYNNDKPEGV----HNLTCLISKRIRMEGFLVPDYFHLYPKFLEMMIPRIKEGKIV 173
           G ISQYN D P               + I  E FLV +Y   +   +  +    KEGK+ 
Sbjct: 260 GQISQYNKDVPYPPPLSPAIEAIQKERNITRERFLVLNYKDKFEPGILQLSQWFKEGKLK 319

Query: 174 YVEDKAEGLESAPAALVGLFSGRNVGKQVVEVATE 208
             E    GLE+  AA   + +G N+GKQ+V ++ E
Sbjct: 320 IKETVINGLENMGAAFQSMMTGGNIGKQIVCISEE 354

>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A* Length = 362

 Score =  248 bits (636), Expect = 1e-82
 Identities = 66/218 (30%), Positives = 104/218 (47%), Gaps = 14/218 (6%)

Query: 1   MPGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLK 60
           + G TAY    E+    +G+ V V+AA+G  GQ   Q +K   C+V+G+  S +K   LK
Sbjct: 146 VSGTTAYISLKELGGLSEGKKVLVTAAAGGTGQFAMQLSKKAKCHVIGTCSSDEKSAFLK 205

Query: 61  NKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVGGKMLDAVLLNMRIQGRITLCGMI 120
              G D   NYK E  +   LK+ +PEG+++ +E+VGG M D  +  +  +GR+ + G I
Sbjct: 206 -SLGCDRPINYKTE-PVGTVLKQEYPEGVDVVYESVGGAMFDLAVDALATKGRLIVIGFI 263

Query: 121 SQYNNDKPEGV----HNLTCLISKRIRMEGFLVPDYFHLYPKFLEMMIPRIKEGKIVYVE 176
           S Y                 L+ K   ++GF +  Y   Y   +  ++     G +V   
Sbjct: 264 SGYQTPTGLSPVKAGTLPAKLLKKSASVQGFFLNHYLSKYQAAMSHLLEMCVSGDLVCEV 323

Query: 177 D--------KAEGLESAPAALVGLFSGRNVGKQVVEVA 206
           D        +  GLES   A+  ++ G+N GK VVE+ 
Sbjct: 324 DLGDLSPEGRFTGLESIFRAVNYMYMGKNTGKIVVELP 361

>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli} Length = 353

 Score =  104 bits (262), Expect = 5e-27
 Identities = 46/207 (22%), Positives = 87/207 (42%), Gaps = 11/207 (5%)

Query: 4   MTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKF 63
            T +A  F++    +GE V +   +  +G    Q A+  G  V  +AGS  K +  + + 
Sbjct: 153 FTVWANLFQMAGLTEGESVLIHGGTSGIGTTAIQLARAFGAEVYATAGSTGKCEACE-RL 211

Query: 64  GFDEAFNYKEEPDLDAALKRYFPEGINIYFENVGGKMLDAVLLNMRIQGRITLCGMISQY 123
           G     NY+ E D  A +K    +G++I  + +G    +  + ++   G +++   +   
Sbjct: 212 GAKRGINYRSE-DFAAVIKAETGQGVDIILDMIGAAYFERNIASLAKDGCLSIIAFLG-- 268

Query: 124 NNDKPEGVHNLTCLISKRIRMEGFLV---PDYF--HLYPKFLEMMIPRIKEGKIVYVEDK 178
                E V NL+ ++ KR+ + G  +          +    L  + P ++ G +  V  K
Sbjct: 269 -GAVAEKV-NLSPIMVKRLTVTGSTMRPRTAEEKRAIRDDLLSEVWPLLEAGTVAPVIHK 326

Query: 179 AEGLESAPAALVGLFSGRNVGKQVVEV 205
               E    A   L  G +VGK ++ V
Sbjct: 327 VFAFEDVADAHRLLEEGSHVGKVMLTV 353

>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti} Length = 349

 Score =  102 bits (256), Expect = 3e-26
 Identities = 39/203 (19%), Positives = 76/203 (37%), Gaps = 13/203 (6%)

Query: 3   GMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNK 62
            +TA A  F++   +  +   ++A +  + +L+   AK  G   + +    +++ LLK  
Sbjct: 150 PLTAIA-MFDIVKQEGEKAFVMTAGASQLCKLIIGLAKEEGFRPIVTVRRDEQIALLK-D 207

Query: 63  FGFDEAFNYKEEPDLDAALKRYF-PEGINIYFENVGGKMLDAVLLNMRIQGRITLCGMIS 121
            G     N K   D +A L+     E   I+ + V G +  A+   M  + R  + G + 
Sbjct: 208 IGAAHVLNEKAP-DFEATLREVMKAEQPRIFLDAVTGPLASAIFNAMPKRARWIIYGRLD 266

Query: 122 QYNNDKPEGVHNLTCLISKRIRMEGFLVPDYFHLYPKFLEMMI----PRIKEGKIVYVED 177
                    +     LI +   +EGF + ++   + +     I     R  +G+      
Sbjct: 267 P----DATVIREPGQLIFQHKHIEGFWLSEWMRQFKERRGPAILEAQKRFSDGRWSTDVT 322

Query: 178 KAEGLESAPAALVGLFSGRNVGK 200
               L  A A +      +  GK
Sbjct: 323 AVVPLAEAIAWVP-AELTKPNGK 344

>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus} Length = 343

 Score =  101 bits (253), Expect = 8e-26
 Identities = 51/205 (24%), Positives = 85/205 (41%), Gaps = 13/205 (6%)

Query: 3   GMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNK 62
            +TA+    +    + G+ V V AA   V     Q AKL G  V+ +AGS+DK+   K  
Sbjct: 151 FLTAWQMVVDKLGVRPGDDVLVMAAGSGVSVAAIQIAKLFGARVIATAGSEDKLRRAK-A 209

Query: 63  FGFDEAFNYKEEPDLDAALKRYFP-EGINIYFENVGGKMLDAVLLNMRIQGRITLCGMIS 121
            G DE  NY   PD    ++R    +G +   ++ G    + V+      GRI + G  S
Sbjct: 210 LGADETVNYTH-PDWPKEVRRLTGGKGADKVVDHTGALYFEGVIKATANGGRIAIAGASS 268

Query: 122 QYNNDKPEGVHNLTCLISKRIRMEGFLVPDYFHLYPKFLEMMIPRIKEGKIVYVEDKAEG 181
                +         +  +++ + G  +          L  ++  ++EGK+  V  +   
Sbjct: 269 G---YEGTL--PFAHVFYRQLSILGSTMAS-----KSRLFPILRFVEEGKLKPVVGQVLP 318

Query: 182 LESAPAALVGLFSGRNVGKQVVEVA 206
           LE+A      L   R  GK V++V 
Sbjct: 319 LEAAAEGHRLLEERRVFGKVVLQVG 343

>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A Length = 447

 Score = 96.0 bits (239), Expect = 1e-23
 Identities = 46/222 (20%), Positives = 67/222 (30%), Gaps = 30/222 (13%)

Query: 3   GMTAYAGFFEVCSP--KQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLK 60
             TAY           KQG+ V +  ASG +G    QF K  G   V    S  K   ++
Sbjct: 203 AGTAYRMLVSDRGAQMKQGDIVLIWGASGGLGSYAIQFVKNGGGIPVAVVSSAQKEAAVR 262

Query: 61  NKFGFDEAFNYKEEPDLDAALKRYFP-----------------EGINIYFENVGGKMLDA 103
              G D   N  E    D                            +I FE+ G      
Sbjct: 263 -ALGCDLVINRAELGITDDIADDPRRVVETGRKLAKLVVEKAGREPDIVFEHTGRVTFGL 321

Query: 104 VLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCLISKRIRMEGFLVPDYFHLYPKFLEMM 163
            ++  R  G +  CG  S Y +       +   L  K  ++ G    ++        +  
Sbjct: 322 SVIVARRGGTVVTCGSSSGYLHT-----FDNRYLWMKLKKIVGSHGANHEE-----QQAT 371

Query: 164 IPRIKEGKIVYVEDKAEGLESAPAALVGLFSGRNVGKQVVEV 205
               + G +V        L  A  A   + + R VGK  V  
Sbjct: 372 NRLFESGAVVPAMSAVYPLAEAAEACRVVQTSRQVGKVAVLC 413

>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A Length = 456

 Score = 95.6 bits (238), Expect = 2e-23
 Identities = 47/222 (21%), Positives = 70/222 (31%), Gaps = 30/222 (13%)

Query: 3   GMTAYAGFFEVCS--PKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLK 60
             TAY           KQG+ V +  ASG +G    QFA   G   +    S  K ++ +
Sbjct: 211 NSTAYRQLVSRNGAGMKQGDNVLIWGASGGLGSYATQFALAGGANPICVVSSPQKAEICR 270

Query: 61  NKFGFDEAFNYKEE----------------PDLDAALKRYF-PEGINIYFENVGGKMLDA 103
              G +   +   E                      ++     E I+I FE+ G +   A
Sbjct: 271 -AMGAEAIIDRNAEGYRFWKDENTQDPKEWKRFGKRIRELTGGEDIDIVFEHPGRETFGA 329

Query: 104 VLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCLISKRIRMEGFLVPDYFHLYPKFLEMM 163
            +   R  G IT C   S Y ++          L     R+ G    +Y           
Sbjct: 330 SVFVTRKGGTITTCASTSGYMHEYD-----NRYLWMSLKRIIGSHFANYRE-----AWEA 379

Query: 164 IPRIKEGKIVYVEDKAEGLESAPAALVGLFSGRNVGKQVVEV 205
              I +G+I     K   LE    A   +    + GK  V  
Sbjct: 380 NRLIAKGRIHPTLSKVYSLEDTGQAAYDVHRNLHQGKVGVLC 421

>4a27_A Synaptic vesicle membrane protein VAT-1 homolog-L; oxidoreductase; 2.10A {Homo sapiens} Length = 349

 Score = 92.3 bits (230), Expect = 2e-22
 Identities = 51/225 (22%), Positives = 83/225 (36%), Gaps = 21/225 (9%)

Query: 1   MPGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLK 60
           M  +TAY   FEV + ++G  V V +A G VGQ V Q    V    V    S  K + +K
Sbjct: 125 MNFVTAYVMLFEVANLREGMSVLVHSAGGGVGQAVAQLCSTVPNVTVFGTASTFKHEAIK 184

Query: 61  NKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVGGKMLDAVLLNMRIQGRITLCGMI 120
           +       F+     D    +KR   EG++I  + + G      L  ++  G   L G  
Sbjct: 185 D--SVTHLFDRNA--DYVQEVKRISAEGVDIVLDCLCGDNTGKGLSLLKPLGTYILYGSS 240

Query: 121 SQYNNDKPEGVH-----------NLTCLISKRIRMEGFLVPDYFHLYPK------FLEMM 163
           +    +                 N   L  +   + GF + +      +       +E +
Sbjct: 241 NMVTGETKSFFSFAKSWWQVEKVNPIKLYEENKVIAGFSLLNLLFKQGRAGLIRGVVEKL 300

Query: 164 IPRIKEGKIVYVEDKAEGLESAPAALVGLFSGRNVGKQVVEVATE 208
           I    + KI  V D    LE    A+  +    N+GK +++V   
Sbjct: 301 IGLYNQKKIKPVVDSLWALEEVKEAMQRIHDRGNIGKLILDVEKT 345

>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A Length = 357

 Score = 91.2 bits (227), Expect = 4e-22
 Identities = 39/213 (18%), Positives = 80/213 (37%), Gaps = 13/213 (6%)

Query: 1   MPGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLK 60
           +   TAY    +    + G+ V  +A++  VGQ V Q A  +G   +     +  +  L 
Sbjct: 150 VNPCTAYRMLMDFEQLQPGDSVIQNASNSGVGQAVIQIAAALGLRTINVVRDRPDIQKLS 209

Query: 61  N---KFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVGGKMLDAVLLNMRIQGRITLC 117
           +     G +     +E    +            +    VGGK    +L  +   G +   
Sbjct: 210 DRLKSLGAEHVITEEELRRPEMKNFFKDMPQPRLALNCVGGKSSTELLRQLARGGTMVTY 269

Query: 118 GMISQYNNDKPEGVHNLTCLISKRIRMEGFLVPDYFHLYP--KFLEMM---IPRIKEGKI 172
           G ++     K   V +++ LI K +++ GF +  +   +   +F E++      I+ G++
Sbjct: 270 GGMA-----KQPVVASVSLLIFKDLKLRGFWLSQWKKDHSPDQFKELILTLCDLIRRGQL 324

Query: 173 VYVEDKAEGLESAPAALVGLFSGRNVGKQVVEV 205
                    L+   +AL          KQ++ +
Sbjct: 325 TAPACSQVPLQDYQSALEASMKPFISSKQILTM 357

>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021} Length = 363

 Score = 91.1 bits (227), Expect = 4e-22
 Identities = 50/203 (24%), Positives = 77/203 (37%), Gaps = 15/203 (7%)

Query: 3   GMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNK 62
           G+TA+    E    + G+ V V    G V     Q AK  G  V+ ++ S++K+D     
Sbjct: 174 GLTAWFALVEKGHLRAGDRVVVQGTGG-VALFGLQIAKATGAEVIVTSSSREKLDRAF-A 231

Query: 63  FGFDEAFNYKEEPDLDAALKRYFP-EGINIYFENVGGKMLDAVLLNMRIQGRITLCGMIS 121
            G D   N   E D    +       G +   E  GG  L   L  +   GRI++ G++ 
Sbjct: 232 LGADHGINRL-EEDWVERVYALTGDRGADHILEIAGGAGLGQSLKAVAPDGRISVIGVLE 290

Query: 122 QYNNDKPEGVHNLTCLISKRIRMEGFLVPDYFHLYPKFLEMMIPRIKEGKIVYVEDKAEG 181
                  E    +  L+ K   ++G  V        + LE ++  +    +  V D    
Sbjct: 291 G-----FEVSGPVGPLLLKSPVVQGISVGH-----RRALEDLVGAVDRLGLKPVIDMRYK 340

Query: 182 LESAPAALVGLFSGRNVGKQVVE 204
               P AL  L  G   GK V+E
Sbjct: 341 FTEVPEALAHLDRG-PFGKVVIE 362

>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A* Length = 334

 Score = 89.6 bits (223), Expect = 1e-21
 Identities = 45/207 (21%), Positives = 89/207 (42%), Gaps = 11/207 (5%)

Query: 3   GMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNK 62
            +TA +   E    K+G+YV + AA+G VG ++ Q  K+ G + +  A + +K+ + K +
Sbjct: 133 VLTALSFTNEAYHVKKGDYVLLFAAAGGVGLILNQLLKMKGAHTIAVASTDEKLKIAK-E 191

Query: 63  FGFDEAFNYKEEPDLDAALKRYF-PEGINIYFENVGGKMLDAVLLNMRIQGRITLCGMIS 121
           +G +   N  +E D+   + ++   +G++  F++VG    +  L  ++ +G     G  S
Sbjct: 192 YGAEYLINASKE-DILRQVLKFTNGKGVDASFDSVGKDTFEISLAALKRKGVFVSFGNAS 250

Query: 122 QYNNDKPEGVHNLTCLISKRIRMEGFLVPDYFHLYPKFLEM---MIPRIKEGKIVYVEDK 178
                      ++T L  K I +    +  Y     ++          +   K+     K
Sbjct: 251 G----LIPPF-SITRLSPKNITLVRPQLYGYIADPEEWKYYSDEFFGLVNSKKLNIKIYK 305

Query: 179 AEGLESAPAALVGLFSGRNVGKQVVEV 205
              L     A   + S + VGK V+E+
Sbjct: 306 TYPLRDYRTAAADIESRKTVGKLVLEI 332

>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A* Length = 354

 Score = 90.0 bits (224), Expect = 1e-21
 Identities = 49/211 (23%), Positives = 93/211 (44%), Gaps = 15/211 (7%)

Query: 4   MTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKF 63
           +TA+     V + + G+YV + A    VG    Q  ++ G   + +AGS+ K+ + + K 
Sbjct: 148 LTAFQLLHLVGNVQAGDYVLIHAGLSGVGTAAIQLTRMAGAIPLVTAGSQKKLQMAE-KL 206

Query: 64  GFDEAFNYKEEPDLDAALKRYF-PEGINIYFENVGGKMLDAVLLNMRIQGRITLCGMISQ 122
           G    FNYK+E D   A  ++    G+N+  + +GG   +  +  + + GR  L G++  
Sbjct: 207 GAAAGFNYKKE-DFSEATLKFTKGAGVNLILDCIGGSYWEKNVNCLALDGRWVLYGLMG- 264

Query: 123 YNNDKPEGVHNLTCLISKRIRMEGFLV----PDYF-HLYPKFLEMMIPRI---KEGKIVY 174
                       + L+ KR  +   L+      Y   L   F E ++P        +++ 
Sbjct: 265 --GGDIN-GPLFSKLLFKRGSLITSLLRSRDNKYKQMLVNAFTEQILPHFSTEGPQRLLP 321

Query: 175 VEDKAEGLESAPAALVGLFSGRNVGKQVVEV 205
           V D+   +     A   + + +N+GK V+E+
Sbjct: 322 VLDRIYPVTEIQEAHKYMEANKNIGKIVLEL 352

>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP} Length = 333

 Score = 85.4 bits (212), Expect = 4e-20
 Identities = 42/205 (20%), Positives = 86/205 (41%), Gaps = 11/205 (5%)

Query: 3   GMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNK 62
           GMTA     +    K G+YV + AA+G +G ++  +A+ +G  V+G+  +++K +  + K
Sbjct: 130 GMTAQYLLHQTHKVKPGDYVLIHAAAGGMGHIMVPWARHLGATVIGTVSTEEKAETAR-K 188

Query: 63  FGFDEAFNYKEEPDLDAALKRYFP-EGINIYFENVGGKMLDAVLLNMRIQGRITLCGMIS 121
            G     NY  + D    ++     +G+++ ++++G   L   L  +R +G     G  S
Sbjct: 189 LGCHHTINYSTQ-DFAEVVREITGGKGVDVVYDSIGKDTLQKSLDCLRPRGMCAAYGHAS 247

Query: 122 QYNNDKPEGVHNLTCLISKR-IRMEGFLVPDYFHLYPKFLEM---MIPRIKEGKIVYVED 177
                  + +  +  L  +  + +    +  Y     +  E    +   +K G +     
Sbjct: 248 G----VADPIRVVEDLGVRGSLFITRPALWHYMSNRSEIDEGSKCLFDAVKAGVLHSSVA 303

Query: 178 KAEGLESAPAALVGLFSGRNVGKQV 202
           K   L  A AA   +   + +G  V
Sbjct: 304 KTFPLREAAAAHKYMGGRQTIGSIV 328

>1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A Length = 364

 Score = 85.5 bits (212), Expect = 5e-20
 Identities = 35/220 (15%), Positives = 69/220 (31%), Gaps = 23/220 (10%)

Query: 1   MPGMTAYAGFFEVCSPKQGEYVFV-SAASGAVGQLVGQFAKLVGCYVVGSAGSK----DK 55
           +  +TAY           G+  F+ +  + AVG+   Q  KL+    +     +    + 
Sbjct: 149 VNPLTAYLMLTHYVKLTPGKDWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDRPNLDEV 208

Query: 56  VDLLKNKFGFDEAFNYKEE--PDLDAALKRYF---PEGINIYFENVGGKMLDAVLLNMRI 110
           V  LK + G  +     +    +    +K +         +    VGGK    +   +  
Sbjct: 209 VASLK-ELGATQVITEDQNNSREFGPTIKEWIKQSGGEAKLALNCVGGKSSTGIARKLNN 267

Query: 111 QGRITLCGMISQYNNDKPEGVHNLTCLISKRIRMEGFLVPDYFHLYPKFLEMMI----PR 166
            G +   G +S             +  I K     GF V +      +     +      
Sbjct: 268 NGLMLTYGGMS-----FQPVTIPTSLYIFKNFTSAGFWVTELLKNNKELKTSTLNQIIAW 322

Query: 167 IKEGKIVYVEDKA---EGLESAPAALVGLFSGRNVGKQVV 203
            +EGK+   +      +G +          +    GKQ++
Sbjct: 323 YEEGKLTDAKSIETLYDGTKPLHELYQDGVANSKDGKQLI 362

>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus} Length = 342

 Score = 83.8 bits (208), Expect = 2e-19
 Identities = 40/207 (19%), Positives = 74/207 (35%), Gaps = 14/207 (6%)

Query: 3   GMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNK 62
             T Y  +      + GE V V  A+G +G    Q AK +G  V+         + +K  
Sbjct: 144 YHTMYFAYARRGQLRAGETVLVLGAAGGIGTAAIQIAKGMGAKVIAVVNRTAATEFVK-S 202

Query: 63  FGFDEAFNYKEEPDLDAALKRYF-PEGINIYFENVGGKMLDAVLLNMRIQGRITLCGMIS 121
            G D     +E      A++      G+++  + +GG   D  +  +  +GR+ + G  +
Sbjct: 203 VGADIVLPLEE--GWAKAVREATGGAGVDMVVDPIGGPAFDDAVRTLASEGRLLVVGFAA 260

Query: 122 QYNNDKPEGVHNLTCLISKRIRMEGFLVPDYFHLYPKFL----EMMIPRIKEGKIVYVED 177
                 P     +  L+ +   + G    ++   +  +L      +   + EG    V  
Sbjct: 261 ---GGIPT--IKVNRLLLRNASLIGVAWGEFLRTHADYLYETQAGLEKLVAEGMRPPV-S 314

Query: 178 KAEGLESAPAALVGLFSGRNVGKQVVE 204
               L     AL     G+  GK V+ 
Sbjct: 315 ARIPLSEGRQALQDFADGKVYGKMVLV 341

>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A* Length = 325

 Score = 83.0 bits (206), Expect = 3e-19
 Identities = 30/122 (24%), Positives = 52/122 (42%), Gaps = 3/122 (2%)

Query: 1   MPGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLK 60
           + G+T      +    K GE +   AA+G VG L  Q+AK +G  ++G+  S +K    K
Sbjct: 123 LKGLTVQYLLRQTYQVKPGEIILFHAAAGGVGSLACQWAKALGAKLIGTVSSPEKAAHAK 182

Query: 61  NKFGFDEAFNYKEEPDLDAALKRYFP-EGINIYFENVGGKMLDAVLLNMRIQGRITLCGM 119
              G  E  +Y  E D+   +      +   + ++ VG       L ++  +G +   G 
Sbjct: 183 -ALGAWETIDYSHE-DVAKRVLELTDGKKCPVVYDGVGQDTWLTSLDSVAPRGLVVSFGN 240

Query: 120 IS 121
            S
Sbjct: 241 AS 242

>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 Length = 351

 Score = 82.6 bits (205), Expect = 5e-19
 Identities = 48/214 (22%), Positives = 84/214 (39%), Gaps = 24/214 (11%)

Query: 1   MPGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLK 60
           +P  TAY         K GE V V  ASG VG    Q A+  G  ++G+AG+++   ++ 
Sbjct: 153 IPYFTAYRALIHSACVKAGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQKIVL 212

Query: 61  NKFGFDEAFNYKEEPDLDAALKRY-FPEGINIYFENVGGKMLDAVLLNMRIQGRITLCGM 119
            + G  E FN++E  +    +K+Y   +GI+I  E +    L   L  +   GR+ + G 
Sbjct: 213 -QNGAHEVFNHREV-NYIDKIKKYVGEKGIDIIIEMLANVNLSKDLSLLSHGGRVIVVGS 270

Query: 120 ISQYNNDKPEGVHNLTCLISKRIRMEGFLVPDYFHLYP-------KFLEMMIPRIKEGKI 172
                    E   N    ++K   + G        L+        ++   +   ++ G +
Sbjct: 271 RG-----TIEI--NPRDTMAKESSIIG------VTLFSSTKEEFQQYAAALQAGMEIGWL 317

Query: 173 VYVEDKAEGLESAPAAL-VGLFSGRNVGKQVVEV 205
             V      LE    A    +      GK ++ +
Sbjct: 318 KPVIGSQYPLEKVAEAHENIIHGSGATGKMILLL 351

>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1 Length = 327

 Score = 81.5 bits (202), Expect = 9e-19
 Identities = 33/120 (27%), Positives = 56/120 (46%), Gaps = 3/120 (2%)

Query: 3   GMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNK 62
           G+T Y    +    K  E     AA+G VG +  Q+AK +G  ++G+ G+  K      K
Sbjct: 125 GLTVYYLLRKTYEIKPDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQSAL-K 183

Query: 63  FGFDEAFNYKEEPDLDAALKRYFP-EGINIYFENVGGKMLDAVLLNMRIQGRITLCGMIS 121
            G  +  NY+EE DL   LK     + + + +++VG    +  L  ++ +G +   G  S
Sbjct: 184 AGAWQVINYREE-DLVERLKEITGGKKVRVVYDSVGRDTWERSLDCLQRRGLMVSFGNSS 242

>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans} Length = 343

 Score = 81.5 bits (202), Expect = 1e-18
 Identities = 40/217 (18%), Positives = 78/217 (35%), Gaps = 24/217 (11%)

Query: 1   MPGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLK 60
           +  +TA+ G  +    + G+ V +    G VG +  Q A   G  V  +A     ++ ++
Sbjct: 133 LVFITAWEGLVDRAQVQDGQTVLIQGGGGGVGHVAIQIALARGARVFATA-RGSDLEYVR 191

Query: 61  NKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVGGKMLDAVLLNMRIQGRITLCGMI 120
              G       +E  D  A       +G ++ ++ +GG +LDA    ++  G +  C   
Sbjct: 192 -DLGATPIDASREPEDYAAEHTA--GQGFDLVYDTLGGPVLDASFSAVKRFGHVVSCLGW 248

Query: 121 SQYNNDKPEGVHNLTCLISKRIRMEG------FLVPDYFHLYPKFLEMMIPRIKEGKI-V 173
                    G H L  L  K+    G       L  +    + + L      ++ GK+  
Sbjct: 249 ---------GTHKLAPLSFKQATYSGVFTLHTLLANEGLAHFGEMLREADALVQTGKLAP 299

Query: 174 YVEDKAEGLESAPAALVGLF----SGRNVGKQVVEVA 206
            ++ +   +    +A   +       R  GK  + V 
Sbjct: 300 RLDPRTFSIAEIGSAYDAVLGRNDVPRQRGKIAITVE 336

>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis} Length = 340

 Score = 81.1 bits (201), Expect = 1e-18
 Identities = 29/211 (13%), Positives = 76/211 (36%), Gaps = 16/211 (7%)

Query: 3   GMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNK 62
            +TA+    E  + ++ + + V+A   A+G L  Q ++++   ++    +    + L  +
Sbjct: 129 PLTAWVTCTETLNLQRNDVLLVNACGSAIGHLFAQLSQILNFRLIAVTRNNKHTEELL-R 187

Query: 63  FGFDEAFNYKEEPDLDAALKRY-FPEGINIYFENVGGKMLDAVLLNMRIQGRITLCGMIS 121
            G     +      L   +       G +   +++GG   + +  ++R  G     G++S
Sbjct: 188 LGAAYVIDTSTA-PLYETVMELTNGIGADAAIDSIGGPDGNELAFSLRPNGHFLTIGLLS 246

Query: 122 QYNNDKPEGVHNLTCLISKRIRMEGFLVPDYFHLYP--KFLEMM---IPRIKEGKIVYVE 176
                  +       +   ++    F +  +       K+ E     I  ++  ++ +++
Sbjct: 247 -----GIQVNWAEI-VTKAKVHANIFHLRHWNDEVSPYKWQETFRHLIRLVENEQLRFMK 300

Query: 177 -DKAEGLESAPAALVGLFSGR-NVGKQVVEV 205
                 L    AA+  + S     GK  +  
Sbjct: 301 VHSTYELADVKAAVDVVQSAEKTKGKVFLTS 331

>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A* Length = 371

 Score = 78.6 bits (194), Expect = 2e-17
 Identities = 33/233 (14%), Positives = 69/233 (29%), Gaps = 31/233 (13%)

Query: 1   MPGMTAYAGFFEV------------CSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVG 48
               TA      +             +  +  YV V   S A   +  Q  +L G   + 
Sbjct: 135 AGISTAGLAMKLLGLPLPSPSADQPPTHSKPVYVLVYGGSTATATVTMQMLRLSGYIPIA 194

Query: 49  SAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVGG----KMLDAV 104
           +  S    DL K   G +E F+Y+  P+L   ++ Y    +    + +          A 
Sbjct: 195 TC-SPHNFDLAK-SRGAEEVFDYR-APNLAQTIRTYTKNNLRYALDCITNVESTTFCFAA 251

Query: 105 LLNMRIQGRITLCGMISQYNNDKPEGVHNLT---CLISKRIRMEGFLV----PDYFHLYP 157
           +   R  G         ++   +     + T    +  +              +      
Sbjct: 252 IG--RAGGHYVSLNPFPEHAATRKMVTTDWTLGPTIFGEGSTWPAPYGRPGSEEERQFGE 309

Query: 158 KFLEMMIPRIKEGKIVYVEDK--AEGLESAPAALVGLFSGRNVG-KQVVEVAT 207
               +    +++G++V+   +    G +     +  +  G   G K VV +  
Sbjct: 310 DLWRIAGQLVEDGRLVHHPLRVVQGGFDHIKQGMELVRKGELSGEKLVVRLEG 362

>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii} Length = 321

 Score = 78.0 bits (193), Expect = 2e-17
 Identities = 49/207 (23%), Positives = 80/207 (38%), Gaps = 24/207 (11%)

Query: 1   MPGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLK 60
             G+TA     +    KQG+ V + A +G VG L  Q AK  G  V+ +A SK     LK
Sbjct: 136 TAGLTALQALNQA-EVKQGDVVLIHAGAGGVGHLAIQLAKQKGTTVITTA-SKRNHAFLK 193

Query: 61  NKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVGGKMLDAVLLNMRIQGR-ITLCGM 119
              G ++  NY EE  L A         ++   + VGG +    +  ++  G  +++  +
Sbjct: 194 -ALGAEQCINYHEEDFLLAI-----STPVDAVIDLVGGDVGIQSIDCLKETGCIVSVPTI 247

Query: 120 ISQYNNDKPEGVHNLTCLISKRIRMEGFLV-PDYFHLYPKFLEMMIPRIKEGKIVYVEDK 178
            +    +  +          K  R  G L   +      + L  +   + E K+     +
Sbjct: 248 TAGRVIEVAK---------QKHRRAFGLLKQFN-----IEELHYLGKLVSEDKLRIEISR 293

Query: 179 AEGLESAPAALVGLFSGRNVGKQVVEV 205
              L  A  A   L +G   GK V +V
Sbjct: 294 IFQLSEAVTAHELLETGHVRGKLVFKV 320

>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens} Length = 375

 Score = 76.7 bits (189), Expect = 9e-17
 Identities = 43/216 (19%), Positives = 82/216 (37%), Gaps = 18/216 (8%)

Query: 3   GMTAYAGFFEV----CSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDL 58
            +TA++   +V         G+ V +  ASG VG    Q  K    +V     S+D  +L
Sbjct: 164 ALTAWSAINKVGGLNDKNCTGKRVLILGASGGVGTFAIQVMKAWDAHVTAVC-SQDASEL 222

Query: 59  LKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVGGKMLDAVLLNMRIQGRITLCG 118
           ++ K G D+  +YK    ++  LK    +  +   +NVGG         ++     T   
Sbjct: 223 VR-KLGADDVIDYKSG-SVEEQLKS--LKPFDFILDNVGGSTETWAPDFLKKWSGATYVT 278

Query: 119 MISQYNND------KPEGVHNLTCLISKRIRMEGFLVPDYFHLY---PKFLEMMIPRIKE 169
           +++ +  +          +     + SK ++     V   +  +      L+ +   +  
Sbjct: 279 LVTPFLLNMDRLGIADGMLQTGVTVGSKALKHFWKGVHYRWAFFMASGPCLDDIAELVDA 338

Query: 170 GKIVYVEDKAEGLESAPAALVGLFSGRNVGKQVVEV 205
           GKI  V ++       P A + +  G   GK V+ V
Sbjct: 339 GKIRPVIEQTFPFSKVPEAFLKVERGHARGKTVINV 374

>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus} Length = 346

 Score = 75.7 bits (187), Expect = 2e-16
 Identities = 46/221 (20%), Positives = 81/221 (36%), Gaps = 28/221 (12%)

Query: 3   GMTAYAGFFEV------CSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKV 56
           G+TAY   F+V       +  +G+ + +   +G VG +  Q AK  G  V+ +A   + +
Sbjct: 129 GITAYETLFDVFGISRNRNENEGKTLLIINGAGGVGSIATQIAKAYGLRVITTASRNETI 188

Query: 57  DLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVGGKM-LDAVLLNMRIQGRIT 115
           +  K K G D   N+KE   L    K    E ++  F      M  D ++  ++ +G I 
Sbjct: 189 EWTK-KMGADIVLNHKE--SLLNQFKTQGIELVDYVFCTFNTDMYYDDMIQLVKPRGHIA 245

Query: 116 LCGMISQYNNDKPEGVHNLTCLISKRIRM--EGFLVPDYFHLYP-----KFLEMMIPRIK 168
                        E   +L  L  K +    E                 ++LE +  +++
Sbjct: 246 TI--------VAFENDQDLNALKPKSLSFSHEFMFARPLNQTDDMIKHHEYLEDITNKVE 297

Query: 169 EGKIVYVEDKAEG---LESAPAALVGLFSGRNVGKQVVEVA 206
           +        K       E+   A   L S   +GK V+ + 
Sbjct: 298 QNIYQPTTTKVIEGLTTENIYQAHQILESNTMIGKLVINLN 338

>3iup_A Putative NADPH:quinone oxidoreductase; YP_296108.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE NDP; 1.70A {Ralstonia eutropha} Length = 379

 Score = 72.7 bits (178), Expect = 2e-15
 Identities = 27/131 (20%), Positives = 47/131 (35%), Gaps = 2/131 (1%)

Query: 1   MPGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLK 60
           +  +TA  G  E    +    +  +AA+  +GQ++ Q     G  +V     +++ DLLK
Sbjct: 155 VNPLTAL-GMVETMRLEGHSALVHTAAASNLGQMLNQICLKDGIKLVNIVRKQEQADLLK 213

Query: 61  NKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVGGKMLDAVLLNMRIQGRITLCGMI 120
              G     N      +    +     G  I F+  GG  L   +L              
Sbjct: 214 -AQGAVHVCNAASPTFMQDLTEALVSTGATIAFDATGGGKLGGQILTCMEAALNKSAREY 272

Query: 121 SQYNNDKPEGV 131
           S+Y +   + V
Sbjct: 273 SRYGSTTHKQV 283

>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D Length = 302

 Score = 71.4 bits (176), Expect = 3e-15
 Identities = 51/206 (24%), Positives = 85/206 (41%), Gaps = 17/206 (8%)

Query: 3   GMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNK 62
            +TAY    +    + GE V V AA+GA+G    Q A+ +G  V+ +A   +K+ L    
Sbjct: 111 FLTAYLAL-KRAQARPGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLALPL-A 168

Query: 63  FGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVGGKMLDAVLLNMRIQGRITLCGMISQ 122
            G +EA  Y E P+   A       G+++  E V GK ++  L  +   GR+   G    
Sbjct: 169 LGAEEAATYAEVPERAKAWG-----GLDLVLE-VRGKEVEESLGLLAHGGRLVYIGAAE- 221

Query: 123 YNNDKPEGVHNLTCLISKRIRMEGFL---VPDYFHLYPKFLEMMIPRIKEGKIVYVEDKA 179
              +          L+ + + + GF    +     L  + L  ++PR+   ++  V    
Sbjct: 222 --GEVAPI--PPLRLMRRNLAVLGFWLTPLLREGALVEEALGFLLPRL-GRELRPVVGPV 276

Query: 180 EGLESAPAALVGLFSGRNVGKQVVEV 205
                A AA   L    + GK VV +
Sbjct: 277 FPFAEAEAAFRALLDRGHTGKVVVRL 302

>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli} Length = 363

 Score = 66.2 bits (162), Expect = 3e-13
 Identities = 36/219 (16%), Positives = 69/219 (31%), Gaps = 27/219 (12%)

Query: 3   GMTAYAGFFEV-----CSPKQGEYVFVSAASGAVGQLVGQFAK-LVGCYVVGSAGSKDKV 56
            +TA+  FF+        P     + +   +G VG +  Q A+      V+ +A   +  
Sbjct: 151 SITAWEAFFDRLDVNKPVPGAAPAILIVGGAGGVGSIAVQIARQRTDLTVIATASRPETQ 210

Query: 57  DLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVGGKMLDAVLLNMRIQGRITL 116
           + +K   G     ++  +P               ++      K    +   +  QGR  L
Sbjct: 211 EWVK-SLGAHHVIDHS-KPLAAEVAALGLGAPAFVFSTTHTDKHAAEIADLIAPQGRFCL 268

Query: 117 CGMISQYNNDKPEGVHNLTCLISKRIRMEG---FLVPDYFHLYP----KFLEMMIPRIKE 169
                    D P    ++     K + +     F  P +         + L  +   + E
Sbjct: 269 I--------DDPSA-FDIMLFKRKAVSIHHELMFTRPMFGTPDMSEQGRLLNDVSRLVDE 319

Query: 170 GKIVYVEDKAEGLESA---PAALVGLFSGRNVGKQVVEV 205
           G++           +A     A   + SG   GK V+E 
Sbjct: 320 GRLRTTLTNRLSPINAANLKQAHALVESGTARGKVVIEG 358

>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis} Length = 315

 Score = 61.5 bits (150), Expect = 1e-11
 Identities = 31/204 (15%), Positives = 60/204 (29%), Gaps = 17/204 (8%)

Query: 1   MPGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLK 60
            P +TA+  F E     +   V +    GAV  L+ Q     G  V     +     L  
Sbjct: 126 CPLLTAWQAF-EKIPLTKQREVLIVGF-GAVNNLLTQMLNNAGYVVDL-VSASLSQALAA 182

Query: 61  NKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVGGKMLDAVLLNMRIQGRI-TLCGM 119
            K G    +    +            +     F+ V  +   A++ +++  G I  +   
Sbjct: 183 -KRGVRHLYREPSQ----------VTQKYFAIFDAVNSQNAAALVPSLKANGHIICIQDR 231

Query: 120 ISQYNNDKPEGVHNLTCLISKRIRMEGFLVPDYFHLYPKFLEMMIPRIKEGKIVYVEDKA 179
           I       P     ++        +  F     + +  +  E ++  I +GK+       
Sbjct: 232 IPA--PIDPAFTRTISYHEIALGALHDFGDRQDWQILMQQGEALLTLIAQGKMEIAAPDI 289

Query: 180 EGLESAPAALVGLFSGRNVGKQVV 203
              E    AL      +      +
Sbjct: 290 FRFEQMIEALDHSEQTKLKTVLTL 313

>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A* Length = 347

 Score = 60.3 bits (147), Expect = 3e-11
 Identities = 41/206 (19%), Positives = 80/206 (38%), Gaps = 21/206 (10%)

Query: 3   GMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAK-LVGCYVVGSAGSKDKVDLLKN 61
           G+T Y       S    + + V  A G +G +  Q AK + G  ++G    ++ V+  K 
Sbjct: 156 GITTYRAV-RKASLDPTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAK- 213

Query: 62  KFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVG-GKMLDAVLLNMRIQGRITLCGMI 120
           + G D   N   +  L    +    +G++   +     K L      +  QG+  + G+ 
Sbjct: 214 RAGADYVINASMQDPLAEIRRITESKGVDAVIDLNNSEKTLSVYPKALAKQGKYVMVGLF 273

Query: 121 SQYNNDKPEGVHNLTCLISKRIRMEGFLV---PDYFHLYPKFLEMMIPRIKEGKIVYVED 177
                   +  ++   +    I+  G LV    D+       + +     + GK+  +  
Sbjct: 274 G------ADLHYHAPLITLSEIQFVGSLVGNQSDF----LGIMRL----AEAGKVKPMIT 319

Query: 178 KAEGLESAPAALVGLFSGRNVGKQVV 203
           K   LE A  A+  L + + +G+QV+
Sbjct: 320 KTMKLEEANEAIDNLENFKAIGRQVL 345

>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1 Length = 198

 Score = 53.4 bits (129), Expect = 3e-09
 Identities = 20/67 (29%), Positives = 34/67 (50%), Gaps = 1/67 (1%)

Query: 4  MTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKF 63
          +TA+    EV     GE V + +A+G VG      AK++G  +  +AGS  K ++L  + 
Sbjct: 24 LTAWHSLCEVGRLSPGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKREMLS-RL 82

Query: 64 GFDEAFN 70
          G +   +
Sbjct: 83 GVEYVGD 89

>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A* Length = 2512

 Score = 53.0 bits (127), Expect = 2e-08
 Identities = 29/114 (25%), Positives = 48/114 (42%), Gaps = 3/114 (2%)

Query: 4    MTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKF 63
             TAY         + GE V + + SG VGQ     A   GC V  + GS +K   L+ +F
Sbjct: 1653 TTAYYSLVVRGRMQPGESVLIHSGSGGVGQAAIAIALSRGCRVFTTVGSAEKRAYLQARF 1712

Query: 64   -GFDEA--FNYKEEPDLDAALKRYFPEGINIYFENVGGKMLDAVLLNMRIQGRI 114
               DE    N ++       L+    +G+++   ++  + L A +  +   GR 
Sbjct: 1713 PQLDETCFANSRDTSFEQHVLRHTAGKGVDLVLNSLAEEKLQASVRCLAQHGRF 1766

>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A* Length = 348

 Score = 50.3 bits (121), Expect = 8e-08
 Identities = 37/161 (22%), Positives = 65/161 (40%), Gaps = 15/161 (9%)

Query: 15  SPKQGEYVFVSAASGAVGQLVGQFAKLVGC-YVVGSAGSKDKVDLLKNKFGFDEAFNYKE 73
            P  G+ V ++ A G +G L    AK  G   V+ S  S  + +L K K G D   N  E
Sbjct: 164 GPISGKSVLITGA-GPLGLLGIAVAKASGAYPVIVSEPSDFRRELAK-KVGADYVINPFE 221

Query: 74  EPDLDAALKRYF-PEGINIYFENVG-GKMLDAVLLNMRIQGRITLCGMISQYNNDKPEGV 131
           E D+   +       G++++ E  G  K L+  L  +   GR++L G+           +
Sbjct: 222 E-DVVKEVMDITDGNGVDVFLEFSGAPKALEQGLQAVTPAGRVSLLGLYP-----GKVTI 275

Query: 132 HNLTCLISKRIRMEGFLVPDYFHLYPKFLEMMIPRIKEGKI 172
                +I K + + G      +  +     ++    + GK+
Sbjct: 276 DFNNLIIFKALTIYGITGRHLWETWYTVSRLL----QSGKL 312

>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa} Length = 795

 Score = 48.2 bits (115), Expect = 6e-07
 Identities = 15/55 (27%), Positives = 26/55 (47%)

Query: 4   MTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDL 58
           +TAY    ++   + GE + V +A+G VG    Q A+ +G  V  +A       +
Sbjct: 331 LTAYYALVDLAGLRPGESLLVHSAAGGVGMAAIQLARHLGAEVYATASEDKWQAV 385

>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A* Length = 343

 Score = 47.6 bits (114), Expect = 8e-07
 Identities = 26/158 (16%), Positives = 57/158 (36%), Gaps = 15/158 (9%)

Query: 17  KQGEYVFVSAASGAVGQLVGQFAKLVGC-YVVGSAGSKDKVDLLKNKFGFDEAFNYKEEP 75
             G+ V ++ A G +G +     +  G   ++ S  +  ++   +  +  D   N  EE 
Sbjct: 163 VSGKSVLITGA-GPIGLMAAMVVRASGAGPILVSDPNPYRLAFAR-PYA-DRLVNPLEE- 218

Query: 76  DLDAALKRYFPEGINIYFENVG-GKMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNL 134
           DL   ++R    G+ +  E  G    +   L+ +   G   + G+ S      P      
Sbjct: 219 DLLEVVRRVTGSGVEVLLEFSGNEAAIHQGLMALIPGGEARILGIPS-----DPIRFDLA 273

Query: 135 TCLISKRIRMEGFLVPDYFHLYPKFLEMMIPRIKEGKI 172
             L+ + I   G      +  + +   ++      G++
Sbjct: 274 GELVMRGITAFGIAGRRLWQTWMQGTALV----YSGRV 307

>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A* Length = 324

 Score = 47.3 bits (113), Expect = 1e-06
 Identities = 45/220 (20%), Positives = 70/220 (31%), Gaps = 39/220 (17%)

Query: 2   PGMTAYAGFFEVCS---PKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDL 58
            G TA      +       Q   V V+ ASG VG         +G  V   +G +     
Sbjct: 127 AGFTAMLCVMALEDAGIRPQDGEVVVTGASGGVGSTAVALLHKLGYQVAAVSGRESTHGY 186

Query: 59  LKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVGGKMLDAVLLNMRIQGRITLCG 118
           LK   G +   +  E  +     K+ +   I    + VG K+L  VL  M   G +  CG
Sbjct: 187 LK-SLGANRILSRDEFAESRPLEKQLWAGAI----DTVGDKVLAKVLAQMNYGGCVAACG 241

Query: 119 MISQYNNDKPE-------------GVHNLTCLISKRIRMEGFLVPDYFHLYPKFLEMMIP 165
           +        P              GV ++    ++R      LV D   L   F      
Sbjct: 242 LAG--GFALPTTVMPFILRNVRLQGVDSVMTPPARRAEAWARLVKD---LPESFYAQAAT 296

Query: 166 RIKEGKIVYVEDKAEGLESAPAALVGLFSGRNVGKQVVEV 205
            I              L  AP     + + +  G+ +V++
Sbjct: 297 EI-------------TLADAPKFADAIINNQVQGRTLVKI 323

>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli} Length = 346

 Score = 45.3 bits (108), Expect = 4e-06
 Identities = 28/159 (17%), Positives = 52/159 (32%), Gaps = 7/159 (4%)

Query: 16  PKQGEYVFVSAASGAVGQLVGQFAKLVGC-YVVGSAGSKDKVDLLKNKFGFDEAFNYKEE 74
             + + V +  A G +G L  Q A  +G   V     S +K+ L K  FG  + FN  E 
Sbjct: 158 GCENKNVIIIGA-GTIGLLAIQCAVALGAKSVTAIDISSEKLALAK-SFGAMQTFNSSEM 215

Query: 75  PDLDAALKRYFPEGINIYFENVG-GKMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHN 133
                           +  E  G  + ++  +       ++ L G     + D       
Sbjct: 216 SAPQMQSVLRELRFNQLILETAGVPQTVELAVEIAGPHAQLALVGT---LHQDLHLTSAT 272

Query: 134 LTCLISKRIRMEGFLVPDYFHLYPKFLEMMIPRIKEGKI 172
              ++ K + + G  +        +  E     + E K+
Sbjct: 273 FGKILRKELTVIGSWMNYSSPWPGQEWETASRLLTERKL 311

>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 Length = 328

 Score = 44.2 bits (105), Expect = 9e-06
 Identities = 48/221 (21%), Positives = 76/221 (34%), Gaps = 39/221 (17%)

Query: 1   MPGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLK 60
                +     E     +   V V+ A+G VG L        G  V  S G   + D L+
Sbjct: 132 FTAALSIHRLEEHGLTPERGPVLVTGATGGVGSLAVSMLAKRGYTVEASTGKAAEHDYLR 191

Query: 61  NKFGFDEAFNYKE--EPDLDAALKRYFPEGINIYFENVGGKMLDAVLLNMRIQGRITLCG 118
              G  E    ++     +    K+ +   +    + VGG+ L  VL  MR  G + + G
Sbjct: 192 -VLGAKEVLAREDVMAERIRPLDKQRWAAAV----DPVGGRTLATVLSRMRYGGAVAVSG 246

Query: 119 MISQYNNDKPE-------------GVHNLTCLISKRIRMEGFLVPDYFHLYPKFLEMMIP 165
           +      + P              G+ ++ C +  R+R+   L  D   L P  LE +  
Sbjct: 247 LTG--GAEVPTTVHPFILRGVSLLGIDSVYCPMDLRLRIWERLAGD---LKPD-LERIAQ 300

Query: 166 RIKEGKIVYVEDKAEGLESAPAALVGLFSGRNVGKQVVEVA 206
            I              L   P AL  +  G   G+ VV +A
Sbjct: 301 EI-------------SLAELPQALKRILRGELRGRTVVRLA 328

>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima} Length = 404

 Score = 43.9 bits (104), Expect = 1e-05
 Identities = 32/191 (16%), Positives = 71/191 (37%), Gaps = 8/191 (4%)

Query: 16  PKQGEYVFVSAASGAVGQLVGQFAKLVGC-YVVGSAGSKDKVDLLKNKFGFDEAFNYKEE 74
            + G+ V +    G +G       K  G   V+ S  S+ + +L K + G D   +  +E
Sbjct: 211 IRPGDNVVILGG-GPIGLAAVAILKHAGASKVILSEPSEVRRNLAK-ELGADHVIDPTKE 268

Query: 75  PDLDAALKRYFPEGINIYFENVG-GKMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHN 133
             ++A L      G  ++ E  G  +++   +  +  + R     +      D    +  
Sbjct: 269 NFVEAVLDYTNGLGAKLFLEATGVPQLVWPQIEEVIWRARGINATVAIVARADAKIPL-T 327

Query: 134 LTCLISKRIRMEGFLVPDYFHLYPKFLEMMIPRIKEGKIVYVEDKAEGLESAPAALVGLF 193
                 +R ++ G         +P+ + +M   +   KI+    K   +E  P  +  L 
Sbjct: 328 GEVFQVRRAQIVGSQGHSGHGTFPRVISLMASGMDMTKII---SKTVSMEEIPEYIKRLQ 384

Query: 194 SGRNVGKQVVE 204
           + +++ K  + 
Sbjct: 385 TDKSLVKVTML 395

>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A* Length = 330

 Score = 43.8 bits (104), Expect = 1e-05
 Identities = 47/222 (21%), Positives = 85/222 (38%), Gaps = 40/222 (18%)

Query: 2   PGMTAYAGFFEVCS---PKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDL 58
            G TA      +       +   V V+ A+G VG +        G  VV S G+++  D 
Sbjct: 131 AGFTAALSVHRLEQNGLSPEKGSVLVTGATGGVGGIAVSMLNKRGYDVVASTGNREAADY 190

Query: 59  LKNKFGFDEAFNYKE--EPDLDAALKRYFPEGINIYFENVGGKMLDAVLLNMRIQGRITL 116
           LK + G  E  + ++  +  L A  K+ +   +    + VGGK L ++L  ++  G + +
Sbjct: 191 LK-QLGASEVISREDVYDGTLKALSKQQWQGAV----DPVGGKQLASLLSKIQYGGSVAV 245

Query: 117 CGMISQYNNDKPE-------------GVHNLTCLISKRIRMEGFLVPDYFHLYPKFLEMM 163
            G+      + P              G+ ++ C +  R  +   +  D   L P  L  +
Sbjct: 246 SGLTG--GGEVPATVYPFILRGVSLLGIDSVYCPMDVRAAVWERMSSD---LKPDQLLTI 300

Query: 164 IPRIKEGKIVYVEDKAEGLESAPAALVGLFSGRNVGKQVVEV 205
           + R               LE  P AL  +   R  G+ +V++
Sbjct: 301 VDREV------------SLEETPGALKDILQNRIQGRVIVKL 330

>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A* Length = 370

 Score = 43.4 bits (103), Expect = 2e-05
 Identities = 23/109 (21%), Positives = 41/109 (37%), Gaps = 8/109 (7%)

Query: 16  PKQGEYVFVSAASGAVGQLVGQFAKLVGC-YVVGSAGSKDKVDLLKNKFGFDEAFNYKEE 74
            K G  V +    G +G L  Q A+L G   V+ S     K  L + + G     +    
Sbjct: 180 IKAGSTVAILGG-GVIGLLTVQLARLAGATTVILSTRQATKRRLAE-EVGATATVDPSAG 237

Query: 75  PDLDAALKRYF---PEGINIYFENVG-GKMLDAVLLNMRIQGRITLCGM 119
            D+  A+       P G+++  E  G  + +       +  G + + G+
Sbjct: 238 -DVVEAIAGPVGLVPGGVDVVIECAGVAETVKQSTRLAKAGGTVVILGV 285

>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1 Length = 380

 Score = 42.2 bits (100), Expect = 5e-05
 Identities = 38/175 (21%), Positives = 62/175 (35%), Gaps = 15/175 (8%)

Query: 3   GMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGC-YVVGSAGSKDKVDLLKN 61
           G TAY  F E      G+ V +  A G +G      A+ +G   V+  AGS +++ L + 
Sbjct: 180 GATAYHAFDEYPESFAGKTVVIQGA-GPLGLFGVVIARSLGAENVIVIAGSPNRLKLAE- 237

Query: 62  KFGFDEAFNYKEEP--DLDAALKRYF-PEGINIYFENVG-GKMLDAVLLNMRIQGRITLC 117
           + G D   N +E    +   A+       G +   E  G  + L      +R  G  ++ 
Sbjct: 238 EIGADLTLNRRETSVEERRKAIMDITHGRGADFILEATGDSRALLEGSELLRRGGFYSVA 297

Query: 118 GMISQYNNDKPEGVHNLTCLISKRIRMEGFLVPDYFHLYPKFLEMMIPRIKEGKI 172
           G+        P        L+ K    +G  V D  H   K + +          
Sbjct: 298 GVA---VPQDPVPFKVYEWLVLKNATFKGIWVSDTSHF-VKTVSIT----SRNYQ 344

>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae} Length = 347

 Score = 41.4 bits (98), Expect = 1e-04
 Identities = 39/154 (25%), Positives = 67/154 (43%), Gaps = 20/154 (12%)

Query: 3   GMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNK 62
           G+T Y    +  +   G +V +S A+G +G L  Q+AK +G  V+G  G + K +L +  
Sbjct: 155 GITVYKAL-KSANLMAGHWVAISGAAGGLGSLAVQYAKAMGYRVLGIDGGEGKEELFR-S 212

Query: 63  FGFDEAFNYKEEPDLDAALKRYFPEG----INIYFENVGGKMLDAVLLNMRIQGRITLCG 118
            G +   ++ +E D+  A+ +    G    IN+    V    ++A    +R  G   L G
Sbjct: 213 IGGEVFIDFTKEKDIVGAVLKATDGGAHGVINVS---VSEAAIEASTRYVRANGTTVLVG 269

Query: 119 MISQYNNDKPEGVH---NLTCLISKRIRMEGFLV 149
           M        P G     ++   + K I + G  V
Sbjct: 270 M--------PAGAKCCSDVFNQVVKSISIVGSYV 295

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 39.8 bits (92), Expect = 4e-04
 Identities = 24/161 (14%), Positives = 50/161 (31%), Gaps = 32/161 (19%)

Query: 53  KDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYF----PEGINIYFENVGGKM-LDAVLLN 107
           KD  D+ K+    +E  +     D  +   R F     +   +  + V   + ++   L 
Sbjct: 36  KDVQDMPKSILSKEEIDHIIMSKDAVSGTLRLFWTLLSKQEEMVQKFVEEVLRINYKFLM 95

Query: 108 MRIQGRITLCGMISQYNNDKPEGVHNLTCLISKRIRMEGFLVPDYFHLYPKFLEMMIPRI 167
             I           +    +P         I +R R+        ++    F +  + R+
Sbjct: 96  SPI-----------KTEQRQPSM--MTRMYIEQRDRL--------YNDNQVFAKYNVSRL 134

Query: 168 KEGKIVYVEDKAEGLESAPAALVGLFSGRNVGKQV--VEVA 206
           +    + +      L   PA  V +      GK    ++V 
Sbjct: 135 Q--PYLKLRQALLELR--PAKNVLIDGVLGSGKTWVALDVC 171

>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus} Length = 344

 Score = 39.5 bits (93), Expect = 4e-04
 Identities = 41/211 (19%), Positives = 64/211 (30%), Gaps = 30/211 (14%)

Query: 3   GMTAYAG---FFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLV--GCYVVGSAGSKDKVD 57
           G T+           S      V V+   G +     Q  K +     +VG + SK   D
Sbjct: 152 GTTSMGAIRQALPFISKFAEPVVIVNGI-GGLAVYTIQILKALMKNITIVGISRSKKHRD 210

Query: 58  LLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVG-GKMLDAVLLNMRIQGRITL 116
               + G D     K+   L   L      G +I  + VG  +    +   +  +G I L
Sbjct: 211 FAL-ELGADYVSEMKDAESLINKLTD--GLGASIAIDLVGTEETTYNLGKLLAQEGAIIL 267

Query: 117 CGMISQYNNDKPEGVH-NLTCLISKRIRMEGFLV---PDYFHLYPKFLEMMIPRIKEGKI 172
            GM         + V            ++ G       D        + +     + GKI
Sbjct: 268 VGME-------GKRVSLEAFDTAVWNKKLLGSNYGSLNDL----EDVVRL----SESGKI 312

Query: 173 VYVEDKAEGLESAPAALVGLFSGRNVGKQVV 203
                    L+    A   L  GR  G+QV+
Sbjct: 313 K-PYIIKVPLDDINKAFTNLDEGRVDGRQVI 342

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	208
3qwb_A	334	Probable quinone oxidoreductase; rossmann fold, qu	100.0
4b7c_A	336	Probable oxidoreductase; NADP cofactor, rossmann f	100.0
4eye_A	342	Probable oxidoreductase; structural genomics, niai	100.0
3jyn_A	325	Quinone oxidoreductase; rossmann fold, protein-NAD	100.0
2j3h_A	345	NADP-dependent oxidoreductase P1; double bond redu	100.0
3uog_A	363	Alcohol dehydrogenase; structural genomics, protei	100.0
4dup_A	353	Quinone oxidoreductase; PSI-biology, structural ge	100.0
3fbg_A	346	Putative arginate lyase; structural genomics, unkn	100.0
1wly_A	333	CAAR, 2-haloacrylate reductase; NADPH-dependent ox	100.0
2c0c_A	362	Zinc binding alcohol dehydrogenase, domain contain	100.0
2zb4_A	357	Prostaglandin reductase 2; rossmann fold, alternat	100.0
3krt_A	456	Crotonyl COA reductase; structural genomics, prote	100.0
2j8z_A	354	Quinone oxidoreductase; medium-chain dehydrogenase	100.0
2eih_A	343	Alcohol dehydrogenase; zinc ION binding protein, s	100.0
4eez_A	348	Alcohol dehydrogenase 1; site-saturation mutagenes	99.98
1h2b_A	359	Alcohol dehydrogenase; oxidoreductase, archaea, hy	99.98
3gms_A	340	Putative NADPH:quinone reductase; structural genom	99.98
3s2e_A	340	Zinc-containing alcohol dehydrogenase superfamily;	99.98
3jv7_A	345	ADH-A; dehydrogenase, nucleotide binding, rossmann	99.98
1yb5_A	351	Quinone oxidoreductase; medium-chain dehydrogenase	99.98
3uko_A	378	Alcohol dehydrogenase class-3; alcohol dehydrogena	99.98
1qor_A	327	Quinone oxidoreductase; HET: NAP; 2.20A {Escherich	99.98
1v3u_A	333	Leukotriene B4 12- hydroxydehydrogenase/prostaglan	99.98
1gu7_A	364	Enoyl-[acyl-carrier-protein] reductase [NADPH, B-s	99.98
3gaz_A	343	Alcohol dehydrogenase superfamily protein; oxidore	99.97
4a0s_A	447	Octenoyl-COA reductase/carboxylase; oxidoreductase	99.97
4a27_A	349	Synaptic vesicle membrane protein VAT-1 homolog-L;	99.97
3nx4_A	324	Putative oxidoreductase; csgid, structural genomic	99.97
4dvj_A	363	Putative zinc-dependent alcohol dehydrogenase Pro;	99.97
1f8f_A	371	Benzyl alcohol dehydrogenase; rossmann fold, oxido	99.97
1vj0_A	380	Alcohol dehydrogenase, zinc-containing; TM0436, st	99.97
1rjw_A	339	ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD	99.97
1zsy_A	357	Mitochondrial 2-enoyl thioester reductase; medium-	99.97
3tqh_A	321	Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella	99.97
1jvb_A	347	NAD(H)-dependent alcohol dehydrogenase; archaeon,	99.97
3gqv_A	371	Enoyl reductase; medium-chain reductase (MDR super	99.97
2h6e_A	344	ADH-4, D-arabinose 1-dehydrogenase; rossman fold,	99.97
3pi7_A	349	NADH oxidoreductase; groes-like fold, NAD(P)-bindi	99.97
1pl8_A	356	Human sorbitol dehydrogenase; NAD, oxidoreductase;	99.97
4ej6_A	370	Putative zinc-binding dehydrogenase; structural ge	99.97
3m6i_A	363	L-arabinitol 4-dehydrogenase; medium chain dehydro	99.97
1iz0_A	302	Quinone oxidoreductase; APO-enzyme, riken structur	99.97
4a2c_A	346	Galactitol-1-phosphate 5-dehydrogenase; oxidoreduc	99.97
3fpc_A	352	NADP-dependent alcohol dehydrogenase; oxydoreducta	99.97
1e3i_A	376	Alcohol dehydrogenase, class II; HET: NAD; 2.08A {	99.97
1e3j_A	352	NADP(H)-dependent ketose reductase; oxidoreductase	99.97
3slk_A	795	Polyketide synthase extender module 2; rossmann fo	99.97
1p0f_A	373	NADP-dependent alcohol dehydrogenase; ADH topology	99.97
1kol_A	398	Formaldehyde dehydrogenase; oxidoreductase; HET: N	99.97
2d8a_A	348	PH0655, probable L-threonine 3-dehydrogenase; pyro	99.97
3ip1_A	404	Alcohol dehydrogenase, zinc-containing; structural	99.97
2dph_A	398	Formaldehyde dismutase; dismutation of aldehydes,	99.97
2fzw_A	373	Alcohol dehydrogenase class III CHI chain; S-nitro	99.97
1cdo_A	374	Alcohol dehydrogenase; oxidoreductase, oxidoreduct	99.97
2dq4_A	343	L-threonine 3-dehydrogenase; NAD-dependent, oxidor	99.97
2jhf_A	374	Alcohol dehydrogenase E chain; oxidoreductase, met	99.97
2hcy_A	347	Alcohol dehydrogenase 1; tetramer of asymmetric di	99.97
1xa0_A	328	Putative NADPH dependent oxidoreductases; structur	99.97
1piw_A	360	Hypothetical zinc-type alcohol dehydrogenase- like	99.97
1uuf_A	369	YAHK, zinc-type alcohol dehydrogenase-like protein	99.97
3two_A	348	Mannitol dehydrogenase; cinnamyl-alcohol dehydroge	99.97
1tt7_A	330	YHFP; alcohol dehydrogenase, Zn-dependent, NAD, st	99.97
2cf5_A	357	Atccad5, CAD, cinnamyl alcohol dehydrogenase; lign	99.96
2b5w_A	357	Glucose dehydrogenase; nucleotide binding motif, o	99.96
3goh_A	315	Alcohol dehydrogenase, zinc-containing; NP_718042.	99.96
1yqd_A	366	Sinapyl alcohol dehydrogenase; lignin, monolignol,	99.96
3iup_A	379	Putative NADPH:quinone oxidoreductase; YP_296108.1	99.96
2vn8_A	375	Reticulon-4-interacting protein 1; mitochondrion,	99.96
2cdc_A	366	Glucose dehydrogenase glucose 1-dehydrogenase, DHG	99.95
2vz8_A	2512	Fatty acid synthase; transferase, phosphopantethei	99.95
1pqw_A	198	Polyketide synthase; rossmann fold, dimer, structu	99.93
1pjc_A	361	Protein (L-alanine dehydrogenase); oxidoreductase,	99.26
2vhw_A	377	Alanine dehydrogenase; NAD, secreted, oxidoreducta	99.2
2eez_A	369	Alanine dehydrogenase; TTHA0216, structural genomi	99.17
1l7d_A	384	Nicotinamide nucleotide transhydrogenase, subunit	99.03
3ce6_A	494	Adenosylhomocysteinase; protein-substrate complex,	98.95
4fgs_A	273	Probable dehydrogenase protein; PSI-biology, nysgr	98.87
1x13_A	401	NAD(P) transhydrogenase subunit alpha; NAD(H)-bind	98.85
3oj0_A	144	Glutr, glutamyl-tRNA reductase; structural genomic	98.74
1gpj_A	404	Glutamyl-tRNA reductase; tRNA-dependent tetrapyrro	98.71
4eso_A	255	Putative oxidoreductase; NADP, structural genomics	98.67
4g81_D	255	Putative hexonate dehydrogenase; enzyme function i	98.63
3p2y_A	381	Alanine dehydrogenase/pyridine nucleotide transhy;	98.58
3ged_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	98.58
3grp_A	266	3-oxoacyl-(acyl carrierprotein) reductase; structu	98.57
4dio_A	405	NAD(P) transhydrogenase subunit alpha PART 1; stru	98.56
2a4k_A	263	3-oxoacyl-[acyl carrier protein] reductase; reduct	98.55
3gvc_A	277	Oxidoreductase, probable short-chain type dehydrog	98.55
4dyv_A	272	Short-chain dehydrogenase/reductase SDR; structura	98.55
4fs3_A	256	Enoyl-[acyl-carrier-protein] reductase [NADPH] FA;	98.52
4dry_A	281	3-oxoacyl-[acyl-carrier-protein] reductase; struct	98.52
4b79_A	242	PA4098, probable short-chain dehydrogenase; oxidor	98.51
3tfo_A	264	Putative 3-oxoacyl-(acyl-carrier-protein) reducta;	98.5
3dii_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	98.5
3ic5_A	118	Putative saccharopine dehydrogenase; structural ge	98.48
3tjr_A	301	Short chain dehydrogenase; structural genomics, se	98.46
3rwb_A	247	TPLDH, pyridoxal 4-dehydrogenase; short chain dehy	98.46
1g0o_A	283	Trihydroxynaphthalene reductase; protein-NADPH-act	98.44
3fpf_A	298	Mtnas, putative uncharacterized protein; thermonic	98.44
2z1n_A	260	Dehydrogenase; reductase, SDR, oxidoreductase; 1.8	98.44
1uls_A	245	Putative 3-oxoacyl-acyl carrier protein reductase;	98.43
4fn4_A	254	Short chain dehydrogenase; NADH-binding, rossmann	98.43
2gdz_A	267	NAD+-dependent 15-hydroxyprostaglandin dehydrogen;	98.42
3f9i_A	249	3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto	98.42
4gkb_A	258	3-oxoacyl-[acyl-carrier protein] reductase; putati	98.42
3rkr_A	262	Short chain oxidoreductase; rossmann fold; HET: NA	98.42
3gvp_A	435	Adenosylhomocysteinase 3; protein CO-factor comple	98.42
2uvd_A	246	3-oxoacyl-(acyl-carrier-protein) reductase; beta-k	98.42
3svt_A	281	Short-chain type dehydrogenase/reductase; ssgcid,	98.41
4e6p_A	259	Probable sorbitol dehydrogenase (L-iditol 2-dehyd;	98.41
3rd5_A	291	Mypaa.01249.C; ssgcid, structural genomics, seattl	98.41
3o26_A	311	Salutaridine reductase; short chain dehydrogenase/	98.41
3n74_A	261	3-ketoacyl-(acyl-carrier-protein) reductase; seatt	98.41
1wma_A	276	Carbonyl reductase [NADPH] 1; oxidoreductase; HET:	98.41
3op4_A	248	3-oxoacyl-[acyl-carrier protein] reductase; 3-keto	98.41
3v2g_A	271	3-oxoacyl-[acyl-carrier-protein] reductase; struct	98.4
4dqx_A	277	Probable oxidoreductase protein; structural genomi	98.4
1hdc_A	254	3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi	98.39
3l6e_A	235	Oxidoreductase, short-chain dehydrogenase/reducta;	98.39
3zv4_A	281	CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox	98.38
1xg5_A	279	ARPG836; short chain dehydrogenase, human, SGC, st	98.38
3rku_A	287	Oxidoreductase YMR226C; substrate fingerprint, sho	98.38
1geg_A	256	Acetoin reductase; SDR family, oxidoreductase; HET	98.37
3is3_A	270	17BETA-hydroxysteroid dehydrogenase; short chain d	98.37
4imr_A	275	3-oxoacyl-(acyl-carrier-protein) reductase; oxidor	98.37
3tzq_B	271	Short-chain type dehydrogenase/reductase; ssgcid,	98.35
3d3w_A	244	L-xylulose reductase; uronate cycle, short-chain d	98.35
3ijr_A	291	Oxidoreductase, short chain dehydrogenase/reducta;	98.34
3oig_A	266	Enoyl-[acyl-carrier-protein] reductase [NADH]; fat	98.34
3imf_A	257	Short chain dehydrogenase; structural genomics, in	98.34
3oid_A	258	Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa	98.33
3d4o_A	293	Dipicolinate synthase subunit A; NP_243269.1, stru	98.33
3n58_A	464	Adenosylhomocysteinase; ssgcid, hydrolase, structu	98.32
1vl8_A	267	Gluconate 5-dehydrogenase; TM0441, structural geno	98.32
3pxx_A	287	Carveol dehydrogenase; structural genomics, seattl	98.32
2jah_A	247	Clavulanic acid dehydrogenase; short-chain dehydro	98.31
1zk4_A	251	R-specific alcohol dehydrogenase; short chain redu	98.31
1hxh_A	253	3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b	98.31
1iy8_A	267	Levodione reductase; oxidoreductase; HET: NAD; 1.6	98.3
3ai3_A	263	NADPH-sorbose reductase; rossmann-fold, NADPH-depe	98.3
2pd4_A	275	Enoyl-[acyl-carrier-protein] reductase [NADH]; ant	98.3
3m1a_A	281	Putative dehydrogenase; short, PSI, MCSG, structur	98.3
3ppi_A	281	3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de	98.3
1nff_A	260	Putative oxidoreductase RV2002; directed evolution	98.29
2nwq_A	272	Probable short-chain dehydrogenase; oxidoreductase	98.29
2rhc_B	277	Actinorhodin polyketide ketoreductase; oxidoreduct	98.29
3pgx_A	280	Carveol dehydrogenase; structural genomics, seattl	98.29
3edm_A	259	Short chain dehydrogenase; structural genomics, ox	98.29
3nyw_A	250	Putative oxidoreductase; fatty acid synthesis,3-ox	98.29
3u5t_A	267	3-oxoacyl-[acyl-carrier-protein] reductase; struct	98.29
3tpc_A	257	Short chain alcohol dehydrogenase-related dehydro;	98.29
3lyl_A	247	3-oxoacyl-(acyl-carrier-protein) reductase; alpha	98.29
3asu_A	248	Short-chain dehydrogenase/reductase SDR; SDR famil	98.28
3grk_A	293	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	98.28
3ak4_A	263	NADH-dependent quinuclidinone reductase; SDR, (R)-	98.28
1yde_A	270	Retinal dehydrogenase/reductase 3; oxidoreductase,	98.28
1ja9_A	274	4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p	98.27
3sju_A	279	Keto reductase; short-chain dehydrogenase, oxidore	98.27
3ksu_A	262	3-oxoacyl-acyl carrier protein reductase; structur	98.27
1gee_A	261	Glucose 1-dehydrogenase; short-chain dehydrogenase	98.27
2o23_A	265	HADH2 protein; HSD17B10, schad, ERAB, type II HADH	98.27
3pk0_A	262	Short-chain dehydrogenase/reductase SDR; ssgcid, s	98.27
3r6d_A	221	NAD-dependent epimerase/dehydratase; structural ge	98.27
3qiv_A	253	Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR	98.26
3h7a_A	252	Short chain dehydrogenase; oxidoreductase, PSI-2,	98.26
4egf_A	266	L-xylulose reductase; structural genomics, ssgcid,	98.26
3v8b_A	283	Putative dehydrogenase, possibly 3-oxoacyl-[acyl-	98.26
2h7i_A	269	Enoyl-[acyl-carrier-protein] reductase [NADH]; oxi	98.26
1ae1_A	273	Tropinone reductase-I; oxidoreductase, tropane alk	98.26
3k31_A	296	Enoyl-(acyl-carrier-protein) reductase; ssgcid, NI	98.26
3kvo_A	346	Hydroxysteroid dehydrogenase-like protein 2; HSDL2	98.26
3rih_A	293	Short chain dehydrogenase or reductase; structural	98.25
3r3s_A	294	Oxidoreductase; structural genomics, csgid, center	98.25
3f1l_A	252	Uncharacterized oxidoreductase YCIK; E. coli, NADP	98.25
3tox_A	280	Short chain dehydrogenase; structural genomics, PS	98.25
3gaf_A	256	7-alpha-hydroxysteroid dehydrogenase; seattle stru	98.25
3r1i_A	276	Short-chain type dehydrogenase/reductase; structur	98.25
3ucx_A	264	Short chain dehydrogenase; ssgcid, seattle structu	98.25
2wsb_A	254	Galactitol dehydrogenase; oxidoreductase, SDR, ros	98.24
1zem_A	262	Xylitol dehydrogenase; rossmann fold, dinucleotide	98.24
2rir_A	300	Dipicolinate synthase, A chain; structural genomic	98.24
4fc7_A	277	Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman	98.23
3tsc_A	277	Putative oxidoreductase; structural genomics, seat	98.23
3ioy_A	319	Short-chain dehydrogenase/reductase SDR; structura	98.23
2g1u_A	155	Hypothetical protein TM1088A; structural genomics,	98.22
3uce_A	223	Dehydrogenase; rossmann fold, oxidoreductase; HET:	98.22
2ew8_A	249	(S)-1-phenylethanol dehydrogenase; transferase; 2.	98.22
3gem_A	260	Short chain dehydrogenase; structural genomics, AP	98.22
4ibo_A	271	Gluconate dehydrogenase; enzyme function initiativ	98.22
1mxh_A	276	Pteridine reductase 2; SDR topology, protein-subst	98.22
2ehd_A	234	Oxidoreductase, oxidoreductase, short-chain dehydr	98.22
3ftp_A	270	3-oxoacyl-[acyl-carrier protein] reductase; ssgcid	98.21
2ph3_A	245	3-oxoacyl-[acyl carrier protein] reductase; TTHA04	98.21
3cxt_A	291	Dehydrogenase with different specificities; rossma	98.21
3awd_A	260	GOX2181, putative polyol dehydrogenase; oxidoreduc	98.21
1yb1_A	272	17-beta-hydroxysteroid dehydrogenase type XI; shor	98.2
1cyd_A	244	Carbonyl reductase; short-chain dehydrogenase, oxi	98.2
2b4q_A	276	Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier	98.2
3guy_A	230	Short-chain dehydrogenase/reductase SDR; structura	98.2
2zat_A	260	Dehydrogenase/reductase SDR family member 4; alpha	98.19
3orf_A	251	Dihydropteridine reductase; alpha-beta-alpha sandw	98.19
1xkq_A	280	Short-chain reductase family member (5D234); parra	98.19
1x1t_A	260	D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S	98.19
1edo_A	244	Beta-keto acyl carrier protein reductase; nucleoti	98.19
3l77_A	235	Short-chain alcohol dehydrogenase; oxidoreductase;	98.18
2d1y_A	256	Hypothetical protein TT0321; strucrtural genomics,	98.18
2hq1_A	247	Glucose/ribitol dehydrogenase; CTH-1438, structura	98.18
3lf2_A	265	Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross	98.18
1spx_A	278	Short-chain reductase family member (5L265); paral	98.18
2qq5_A	260	DHRS1, dehydrogenase/reductase SDR family member 1	98.18
3ond_A	488	Adenosylhomocysteinase; plant protein, enzyme-subs	98.18
2ae2_A	260	Protein (tropinone reductase-II); oxidoreductase,	98.18
1xhl_A	297	Short-chain dehydrogenase/reductase family member	98.17
3h2s_A	224	Putative NADH-flavin reductase; Q03B84, NESG, LCR1	98.17
1zmo_A	244	Halohydrin dehalogenase; haloalcohol dehalogenase,	98.16
1zmt_A	254	Haloalcohol dehalogenase HHEC; halohydrin dehaloge	98.16
2pnf_A	248	3-oxoacyl-[acyl-carrier-protein] reductase; short	98.15
2cfc_A	250	2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor	98.15
2q2v_A	255	Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore	98.15
1w6u_A	302	2,4-dienoyl-COA reductase, mitochondrial precursor	98.15
2bgk_A	278	Rhizome secoisolariciresinol dehydrogenase; oxidor	98.14
3ctm_A	279	Carbonyl reductase; alcohol dehydrogenase, short-c	98.14
3i1j_A	247	Oxidoreductase, short chain dehydrogenase/reducta;	98.13
3a28_C	258	L-2.3-butanediol dehydrogenase; chiral substrate r	98.13
1fmc_A	255	7 alpha-hydroxysteroid dehydrogenase; short-chain	98.13
1qsg_A	265	Enoyl-[acyl-carrier-protein] reductase; enoyl redu	98.13
3p19_A	266	BFPVVD8, putative blue fluorescent protein; rossma	98.12
3t4x_A	267	Oxidoreductase, short chain dehydrogenase/reducta;	98.12
3c85_A	183	Putative glutathione-regulated potassium-efflux S	98.12
4hp8_A	247	2-deoxy-D-gluconate 3-dehydrogenase; enzyme functi	98.12
1yxm_A	303	Pecra, peroxisomal trans 2-enoyl COA reductase; pe	98.11
2c07_A	285	3-oxoacyl-(acyl-carrier protein) reductase; oxidor	98.11
3afn_B	258	Carbonyl reductase; alpha/beta/alpha, rossmann-fol	98.11
1e7w_A	291	Pteridine reductase; dihydrofolate reductase, shor	98.11
3kzv_A	254	Uncharacterized oxidoreductase YIR035C; cytoplasmi	98.1
3e8x_A	236	Putative NAD-dependent epimerase/dehydratase; stru	98.1
3o38_A	266	Short chain dehydrogenase; tuberculosis, ortholog	98.1
2yvl_A	248	TRMI protein, hypothetical protein; tRNA, methyltr	98.09
3v2h_A	281	D-beta-hydroxybutyrate dehydrogenase; structural g	98.09
1oaa_A	259	Sepiapterin reductase; tetrahydrobiopterin, oxidor	98.09
4da9_A	280	Short-chain dehydrogenase/reductase; structural ge	98.08
2qhx_A	328	Pteridine reductase 1; oxidoreductase, short-chain	98.08
3uve_A	286	Carveol dehydrogenase ((+)-trans-carveol dehydrog;	98.08
2ekp_A	239	2-deoxy-D-gluconate 3-dehydrogenase; structural ge	98.08
1xu9_A	286	Corticosteroid 11-beta-dehydrogenase, isozyme 1; h	98.08
2pd6_A	264	Estradiol 17-beta-dehydrogenase 8; short-chain deh	98.08
1uzm_A	247	3-oxoacyl-[acyl-carrier protein] reductase; beta-k	98.08
1xq1_A	266	Putative tropinone reducatse; structural genomics,	98.08
4dmm_A	269	3-oxoacyl-[acyl-carrier-protein] reductase; rossma	98.07
3fwz_A	140	Inner membrane protein YBAL; TRKA-N domain, E.coli	98.07
3s55_A	281	Putative short-chain dehydrogenase/reductase; stru	98.06
3oml_A	613	GH14720P, peroxisomal multifunctional enzyme type	98.06
1lu9_A	287	Methylene tetrahydromethanopterin dehydrogenase; a	98.05
3t7c_A	299	Carveol dehydrogenase; structural genomics, seattl	98.05
2fwm_X	250	2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e	98.05
1gz6_A	319	Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MF	98.05
2x9g_A	288	PTR1, pteridine reductase; short chain dehydrogena	98.05
2ag5_A	246	DHRS6, dehydrogenase/reductase (SDR family) member	98.05
3njr_A	204	Precorrin-6Y methylase; methyltransferase, decarbo	98.04
2bd0_A	244	Sepiapterin reductase; oxidoreductase; HET: NAP BI	98.04
3sc4_A	285	Short chain dehydrogenase (A0QTM2 homolog); ssgcid	98.04
3sx2_A	278	Putative 3-ketoacyl-(acyl-carrier-protein) reduct;	98.04
3u9l_A	324	3-oxoacyl-[acyl-carrier-protein] reductase; struct	98.03
3ew7_A	221	LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend	98.03
4iin_A	271	3-ketoacyl-acyl carrier protein reductase (FABG);	98.03
2wyu_A	261	Enoyl-[acyl carrier protein] reductase; oxidoreduc	98.03
3qvo_A	236	NMRA family protein; structural genomics, PSI-biol	98.02
2dtx_A	264	Glucose 1-dehydrogenase related protein; rossmann	98.01
3h9u_A	436	Adenosylhomocysteinase; NAD CO-factor complex, str	98.01
1o5i_A	249	3-oxoacyl-(acyl carrier protein) reductase; TM1169	98.0
3nrc_A	280	Enoyl-[acyl-carrier-protein] reductase (NADH); ros	98.0
2p91_A	285	Enoyl-[acyl-carrier-protein] reductase [NADH]; NAD	98.0
3ek2_A	271	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	97.98
1ooe_A	236	Dihydropteridine reductase; structural genomics, P	97.98
3oec_A	317	Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO;	97.98
1dhr_A	241	Dihydropteridine reductase; oxidoreductase(acting	97.98
3e03_A	274	Short chain dehydrogenase; structural genomics, PS	97.98
3dr5_A	221	Putative O-methyltransferase; Q8NRD3, CGL1119, PF0	97.98
1fjh_A	257	3alpha-hydroxysteroid dehydrogenase/carbonyl reduc	97.97
1sby_A	254	Alcohol dehydrogenase; ternary complex, NAD, trifl	97.96
3e48_A	289	Putative nucleoside-diphosphate-sugar epimerase; a	97.96
3uxy_A	266	Short-chain dehydrogenase/reductase SDR; structura	97.96
3osu_A	246	3-oxoacyl-[acyl-carrier-protein] reductase; struct	97.96
3dqp_A	219	Oxidoreductase YLBE; alpha-beta protein., structur	97.95
1yo6_A	250	Putative carbonyl reductase sniffer; tyrosine-depe	97.95
3uf0_A	273	Short-chain dehydrogenase/reductase SDR; gluconate	97.95
1h5q_A	265	NADP-dependent mannitol dehydrogenase; oxidoreduct	97.94
4e3z_A	272	Putative oxidoreductase protein; PSI-biology, stru	97.94
3vtz_A	269	Glucose 1-dehydrogenase; rossmann fold, oxidoreduc	97.92
4h15_A	261	Short chain alcohol dehydrogenase-related dehydro;	97.92
3qlj_A	322	Short chain dehydrogenase; structural genomics, se	97.91
2hmt_A	144	YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane	97.9
3gdg_A	267	Probable NADP-dependent mannitol dehydrogenase; ro	97.9
1sny_A	267	Sniffer CG10964-PA; alpha and beta protein, rossma	97.89
3icc_A	255	Putative 3-oxoacyl-(acyl carrier protein) reducta;	97.87
3tnl_A	315	Shikimate dehydrogenase; structural genomics, cent	97.87
3llv_A	141	Exopolyphosphatase-related protein; NAD(P)-binding	97.87
3gk3_A	269	Acetoacetyl-COA reductase; acetoacetyl-CO reductas	97.86
1hdo_A	206	Biliverdin IX beta reductase; foetal metabolism, H	97.85
2gn4_A	344	FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann	97.83
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	97.83
3tl3_A	257	Short-chain type dehydrogenase/reductase; ssgcid,	97.82
3hem_A	302	Cyclopropane-fatty-acyl-phospholipid synthase 2; p	97.82
2fk8_A	318	Methoxy mycolic acid synthase 4; S-adenosylmethion	97.81
3tfw_A	248	Putative O-methyltransferase; PSI-biology, nysgrc,	97.81
2hnk_A	239	SAM-dependent O-methyltransferase; modified rossma	97.81
1jg1_A	235	PIMT;, protein-L-isoaspartate O-methyltransferase;	97.81
1p91_A	269	Ribosomal RNA large subunit methyltransferase A; R	97.8
3dhn_A	227	NAD-dependent epimerase/dehydratase; reductase, PF	97.79
3jyo_A	283	Quinate/shikimate dehydrogenase; enzyme-cofactor c	97.79
3d7l_A	202	LIN1944 protein; APC89317, structural genomics, PS	97.78
2gpy_A	233	O-methyltransferase; structural genomics, PSI, pro	97.78
3un1_A	260	Probable oxidoreductase; structural genomics, PSI-	97.78
3i4f_A	264	3-oxoacyl-[acyl-carrier protein] reductase; struct	97.78
3s8m_A	422	Enoyl-ACP reductase; rossmann fold, oxidoreductase	97.78
4iiu_A	267	3-oxoacyl-[acyl-carrier protein] reductase; struct	97.76
1o54_A	277	SAM-dependent O-methyltransferase; TM0748, structu	97.76
2dkn_A	255	3-alpha-hydroxysteroid dehydrogenase; oxidoreducta	97.76
3ezl_A	256	Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA	97.75
2pwy_A	258	TRNA (adenine-N(1)-)-methyltransferase; mtase, ado	97.75
3mb5_A	255	SAM-dependent methyltransferase; RNA methyltransfe	97.74
3ruf_A	351	WBGU; rossmann fold, UDP-hexose 4-epimerase, isome	97.74
1xq6_A	253	Unknown protein; structural genomics, protein stru	97.74
3cbg_A	232	O-methyltransferase; cyanobacterium; HET: SAH FER	97.74
2yxe_A	215	Protein-L-isoaspartate O-methyltransferase; rossma	97.74
3zu3_A	405	Putative reductase YPO4104/Y4119/YP_4011; oxidored	97.74
1nyt_A	271	Shikimate 5-dehydrogenase; alpha/beta domains, WID	97.73
2nm0_A	253	Probable 3-oxacyl-(acyl-carrier-protein) reductas;	97.73
4eue_A	418	Putative reductase CA_C0462; TER, biofuel, synthet	97.73
1y1p_A	342	ARII, aldehyde reductase II; rossmann fold, short	97.73
3u0b_A	454	Oxidoreductase, short chain dehydrogenase/reducta	97.7
3c3y_A	237	Pfomt, O-methyltransferase; plant secondary metabo	97.7
4e4y_A	244	Short chain dehydrogenase family protein; structur	97.69
3lbf_A	210	Protein-L-isoaspartate O-methyltransferase; modifi	97.68
2nyu_A	196	Putative ribosomal RNA methyltransferase 2; SAM, s	97.68
1sui_A	247	Caffeoyl-COA O-methyltransferase; rossmann fold, p	97.68
1lss_A	140	TRK system potassium uptake protein TRKA homolog;	97.67
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	97.67
1wwk_A	307	Phosphoglycerate dehydrogenase; riken structural g	97.67
3e05_A	204	Precorrin-6Y C5,15-methyltransferase (decarboxyla;	97.66
2yut_A	207	Putative short-chain oxidoreductase; alpha and bet	97.66
2zcu_A	286	Uncharacterized oxidoreductase YTFG; alpha-beta sa	97.64
3duw_A	223	OMT, O-methyltransferase, putative; alternating of	97.64
3hm2_A	178	Precorrin-6Y C5,15-methyltransferase; alpha-beta-s	97.64
2avd_A	229	Catechol-O-methyltransferase; structural genomics,	97.63
1jtv_A	327	17 beta-hydroxysteroid dehydrogenase type 1; stero	97.63
3orh_A	236	Guanidinoacetate N-methyltransferase; structura ge	97.61
3e9n_A	245	Putative short-chain dehydrogenase/reductase; stru	97.61
3enk_A	341	UDP-glucose 4-epimerase; seattle structural genomi	97.6
2bka_A	242	CC3, TAT-interacting protein TIP30; NADPH, PEG600,	97.6
3ujc_A	266	Phosphoethanolamine N-methyltransferase; parasite;	97.58
3tr6_A	225	O-methyltransferase; cellular processes; HET: SAH;	97.58
2egg_A	297	AROE, shikimate 5-dehydrogenase; dimer, X-RAY diff	97.58
2jl1_A	287	Triphenylmethane reductase; oxidoreductase, biorem	97.58
3mje_A	496	AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.	97.57
2ydy_A	315	Methionine adenosyltransferase 2 subunit beta; oxi	97.57
3sxp_A	362	ADP-L-glycero-D-mannoheptose-6-epimerase; rossman	97.56
2gas_A	307	Isoflavone reductase; NADPH-dependent reductase, o	97.56
1i9g_A	280	Hypothetical protein RV2118C; mtase, adoMet, cryst	97.56
2fr1_A	486	Erythromycin synthase, eryai; short chain dehydrog	97.55
2z1m_A	345	GDP-D-mannose dehydratase; short-chain dehydrogena	97.55
2z5l_A	511	Tylkr1, tylactone synthase starter module and modu	97.54
2b25_A	336	Hypothetical protein; structural genomics, methyl	97.54
3t4e_A	312	Quinate/shikimate dehydrogenase; structural genomi	97.54
1uay_A	242	Type II 3-hydroxyacyl-COA dehydrogenase; beta oxid	97.54
1id1_A	153	Putative potassium channel protein; RCK domain, E.	97.53
3nzo_A	399	UDP-N-acetylglucosamine 4,6-dehydratase; structura	97.52
1v8b_A	479	Adenosylhomocysteinase; hydrolase; HET: NAD ADN; 2	97.52
3qp9_A	525	Type I polyketide synthase pikaii; rossmann fold,	97.52
2ekl_A	313	D-3-phosphoglycerate dehydrogenase; structural gen	97.52
3eey_A	197	Putative rRNA methylase; rRNA methylation, S-adeno	97.51
3d64_A	494	Adenosylhomocysteinase; structural genomics, ssgci	97.51
1l3i_A	192	Precorrin-6Y methyltransferase/putative decarboxyl	97.51
1qyd_A	313	Pinoresinol-lariciresinol reductase; NADPH-depende	97.51
1kpg_A	287	CFA synthase;, cyclopropane-fatty-acyl-phospholipi	97.49
3slg_A	372	PBGP3 protein; structural genomics, seattle struct	97.49
2g76_A	335	3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidor	97.49
2axq_A	467	Saccharopine dehydrogenase; rossmann fold variant,	97.48
3o8q_A	281	Shikimate 5-dehydrogenase I alpha; structural geno	97.47
3abi_A	365	Putative uncharacterized protein PH1688; L-lysine	97.47
2wm3_A	299	NMRA-like family domain containing protein 1; unkn	97.47
3l9w_A	413	Glutathione-regulated potassium-efflux system Pro	97.47
1rkx_A	357	CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD;	97.46
2pk3_A	321	GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, shor	97.46
1c1d_A	355	L-phenylalanine dehydrogenase; amino acid dehydrog	97.45
3pwz_A	272	Shikimate dehydrogenase 3; alpha-beta, oxidoreduct	97.44
3cea_A	346	MYO-inositol 2-dehydrogenase; NP_786804.1, oxidore	97.44
2pzm_A	330	Putative nucleotide sugar epimerase/ dehydratase;	97.44
2nxc_A	254	L11 mtase, ribosomal protein L11 methyltransferase	97.43
3c1o_A	321	Eugenol synthase; phenylpropene, PIP reductase, sh	97.43
4ina_A	405	Saccharopine dehydrogenase; structural genomics, P	97.43
1dl5_A	317	Protein-L-isoaspartate O-methyltransferase; isoasp	97.43
1jay_A	212	Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossma	97.43
1nkv_A	256	Hypothetical protein YJHP; structural genomics, PS	97.42
1p9l_A	245	Dihydrodipicolinate reductase; oxidoreductase, lys	97.41
3phh_A	269	Shikimate dehydrogenase; shikimate pathway, helico	97.41
2x4g_A	342	Nucleoside-diphosphate-sugar epimerase; isomerase;	97.4
1rpn_A	335	GDP-mannose 4,6-dehydratase; short-chain dehydroge	97.4
2pbf_A	227	Protein-L-isoaspartate O-methyltransferase beta-A	97.4
1ff9_A	450	Saccharopine reductase; lysine biosynthesis, alpha	97.37
4e5n_A	330	Thermostable phosphite dehydrogenase; D-2-hydroxya	97.37
3m2p_A	311	UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J	97.37
1r18_A	227	Protein-L-isoaspartate(D-aspartate)-O-methyltrans;	97.36
3i6i_A	346	Putative leucoanthocyanidin reductase 1; rossmann	97.35
1vl0_A	292	DTDP-4-dehydrorhamnose reductase, RFBD ortholog; s	97.35
3jtm_A	351	Formate dehydrogenase, mitochondrial; mitochondrio	97.34
1qyc_A	308	Phenylcoumaran benzylic ether reductase PT1; NADPH	97.34
3mti_A	185	RRNA methylase; SAM-dependent, PSI, MCSG, structur	97.34
2z2v_A	365	Hypothetical protein PH1688; L-lysine dehydrogenas	97.34
1vbf_A	231	231AA long hypothetical protein-L-isoaspartate O-	97.33
1xgk_A	352	Nitrogen metabolite repression regulator NMRA; ros	97.33
3vc1_A	312	Geranyl diphosphate 2-C-methyltransferase; rossman	97.33
1mjf_A	281	Spermidine synthase; spermidine synthetase, struct	97.32
4df3_A	233	Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase;	97.31
1yb2_A	275	Hypothetical protein TA0852; structural genomics,	97.3
2dbq_A	334	Glyoxylate reductase; D-3-phosphoglycerate dehydro	97.3
3ou2_A	218	SAM-dependent methyltransferase; O-methyltransfera	97.3
2c29_D	337	Dihydroflavonol 4-reductase; flavonoids, short deh	97.29
1ek6_A	348	UDP-galactose 4-epimerase; short-chain dehydrogena	97.29
3u81_A	221	Catechol O-methyltransferase; neurotransmitter deg	97.28
3rft_A	267	Uronate dehydrogenase; apoenzyme, rossmann fold, N	97.28
3dli_A	240	Methyltransferase; PSI-II, NYSGXRC, structural gen	97.27
3lt0_A	329	Enoyl-ACP reductase; triclosan, triclosan variant,	97.27
3gg9_A	352	D-3-phosphoglycerate dehydrogenase oxidoreductase;	97.27
4id9_A	347	Short-chain dehydrogenase/reductase; putative dehy	97.26
1sb8_A	352	WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCN	97.25
3zen_D	3089	Fatty acid synthase; transferase, mycolic acid bio	97.25
2glx_A	332	1,5-anhydro-D-fructose reductase; NADP(H) dependen	97.25
1db3_A	372	GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lya	97.24
1i1n_A	226	Protein-L-isoaspartate O-methyltransferase; S-aden	97.24
2j6i_A	364	Formate dehydrogenase; oxidoreductase, D-specific-	97.24
2b2c_A	314	Spermidine synthase; beta-alpha, transferase; 2.50	97.23
2gcg_A	330	Glyoxylate reductase/hydroxypyruvate reductase; NA	97.23
3slk_A	795	Polyketide synthase extender module 2; rossmann fo	97.23
3l4b_C	218	TRKA K+ channel protien TM1088B; potassium channel	97.23
2q1w_A	333	Putative nucleotide sugar epimerase/ dehydratase;	97.22
2r6j_A	318	Eugenol synthase 1; phenylpropene, PIP reductase,	97.22
3gjy_A	317	Spermidine synthase; APC62791, structural genomics	97.22
3sc6_A	287	DTDP-4-dehydrorhamnose reductase; RFBD, structural	97.22
3m4x_A	456	NOL1/NOP2/SUN family protein; mtase domain, PUA do	97.2
4hy3_A	365	Phosphoglycerate oxidoreductase; PSI-biology, stru	97.2
2nac_A	393	NAD-dependent formate dehydrogenase; oxidoreductas	97.2
1xj5_A	334	Spermidine synthase 1; structural genomics, protei	97.2
2o57_A	297	Putative sarcosine dimethylglycine methyltransfera	97.19
1fbn_A	230	MJ fibrillarin homologue; MJ proteins, ribosomal R	97.19
4ggo_A	401	Trans-2-enoyl-COA reductase; rossmann fold, oxidor	97.18
3tum_A	269	Shikimate dehydrogenase family protein; rossmann-f	97.17
3bwc_A	304	Spermidine synthase; SAM, SGPP, structura genomics	97.17
3ggo_A	314	Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-b	97.16
2c5a_A	379	GDP-mannose-3', 5'-epimerase; short chain dehydrat	97.16
1u7z_A	226	Coenzyme A biosynthesis bifunctional protein coabc	97.16
3fbt_A	282	Chorismate mutase and shikimate 5-dehydrogenase fu	97.15
2d0i_A	333	Dehydrogenase; structural genomics, NPPSFA, nation	97.14
3m33_A	226	Uncharacterized protein; structural genomics, PSI-	97.13
1p77_A	272	Shikimate 5-dehydrogenase; NADPH, oxidoreductase;	97.12
1i24_A	404	Sulfolipid biosynthesis protein SQD1; SDR, short-c	97.12
2uv8_A	1887	Fatty acid synthase subunit alpha (FAS2); fatty ac	97.12
2yy7_A	312	L-threonine dehydrogenase; thermolabIle, flavobact	97.12
3q2i_A	354	Dehydrogenase; rossmann fold, UDP-sugar binding, N	97.1
3bus_A	273	REBM, methyltransferase; rebeccamycin synthesis; H	97.1
2ggs_A	273	273AA long hypothetical DTDP-4-dehydrorhamnose red	97.1
3ius_A	286	Uncharacterized conserved protein; APC63810, silic	97.09
2i7c_A	283	Spermidine synthase; transferase, structural genom	97.09
1gdh_A	320	D-glycerate dehydrogenase; oxidoreductase(CHOH (D)	97.08
2p4h_X	322	Vestitone reductase; NADPH-dependent reductase, is	97.08
3f4k_A	257	Putative methyltransferase; structural genomics, P	97.07
2w2k_A	348	D-mandelate dehydrogenase; 2-hydroxyacid dehydroge	97.07
2bll_A	345	Protein YFBG; decarboxylase, short chain dehydroge	97.07
4dmg_A	393	Putative uncharacterized protein TTHA1493; rRNA, m	97.06
1orr_A	347	CDP-tyvelose-2-epimerase; rossmann fold, short-cha	97.06
3c3p_A	210	Methyltransferase; NP_951602.1, structural genomic	97.06
3bkw_A	243	MLL3908 protein, S-adenosylmethionine dependent me	97.05
4gek_A	261	TRNA (CMO5U34)-methyltransferase; structural genom	97.05
2uv9_A	1878	Fatty acid synthase alpha subunits; fungal, dehydr	97.04
1vpd_A	299	Tartronate semialdehyde reductase; structural geno	97.04
1n7h_A	381	GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR,	97.04
4f6c_A	427	AUSA reductase domain protein; thioester reductase	97.04
2x6t_A	357	ADP-L-glycero-D-manno-heptose-6-epimerase; isomera	97.02
3pef_A	287	6-phosphogluconate dehydrogenase, NAD-binding; gam	97.02
2o2s_A	315	Enoyl-acyl carrier reductase; enoyl reductase, tri	97.01
1n2s_A	299	DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold	97.01
3iv6_A	261	Putative Zn-dependent alcohol dehydrogenase; alpha	97.0
3r3h_A	242	O-methyltransferase, SAM-dependent; structural gen	97.0
4fb5_A	393	Probable oxidoreductase protein; PSI-biology, nysg	97.0
3ntv_A	232	MW1564 protein; rossmann fold, putative methyltran	97.0
2pff_A	1688	Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl	97.0
1a4i_A	301	Methylenetetrahydrofolate dehydrogenase / methenyl	96.99
2pt6_A	321	Spermidine synthase; transferase, structural genom	96.99
3evz_A	230	Methyltransferase; NYSGXRC, NEW YORK SGX research	96.99
3rc1_A	350	Sugar 3-ketoreductase; sugar biosynthesis, TDP bin	96.99
1vl5_A	260	Unknown conserved protein BH2331; putative methylt	96.98
2o07_A	304	Spermidine synthase; structural genomics, structur	96.98
2gk4_A	232	Conserved hypothetical protein; alpha-beta-alpha s	96.97
1udb_A	338	Epimerase, UDP-galactose-4-epimerase; isomerase; H	96.97
1edz_A	320	5,10-methylenetetrahydrofolate dehydrogenase; nucl	96.96
1gy8_A	397	UDP-galactose 4-epimerase; oxidoreductase; HET: NA	96.96
4had_A	350	Probable oxidoreductase protein; structural genomi	96.95
1pjz_A	203	Thiopurine S-methyltransferase; polymorphism, S-ad	96.95
3l07_A	285	Bifunctional protein fold; structural genomics, ID	96.95
1zx0_A	236	Guanidinoacetate N-methyltransferase; structural g	96.94

>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*

Probab=100.00  E-value=1.3e-33  Score=217.67  Aligned_cols=199  Identities=23%  Similarity=0.311  Sum_probs=176.1

Q ss_pred             chhhHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHHH
Q 028523            2 PGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAAL   81 (208)
Q Consensus         2 ~~~tA~~~l~~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~~   81 (208)
                      +++|||+++.+.+++++|++|||+||+|++|++++|+++..|++|+++++++++.+.++ ++|++.++++++. ++.+.+
T Consensus       132 ~~~ta~~~l~~~~~~~~g~~vlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~-~~ga~~~~~~~~~-~~~~~~  209 (334)
T 3qwb_A          132 QVLTALSFTNEAYHVKKGDYVLLFAAAGGVGLILNQLLKMKGAHTIAVASTDEKLKIAK-EYGAEYLINASKE-DILRQV  209 (334)
T ss_dssp             HHHHHHHHHHTTSCCCTTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH-HTTCSEEEETTTS-CHHHHH
T ss_pred             HHHHHHHHHHHhccCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HcCCcEEEeCCCc-hHHHHH
Confidence            46799999988889999999999999999999999999999999999999999999998 8999999999887 899999


Q ss_pred             HhHCCC-CccEEEeCCCchhHHHHHHhhccCCEEEEEecccccCCCCCCCccchHHHhhcceeEEEeecccc---ccchH
Q 028523           82 KRYFPE-GINIYFENVGGKMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCLISKRIRMEGFLVPDY---FHLYP  157 (208)
Q Consensus        82 ~~~~~~-~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~  157 (208)
                      ++.+++ ++|++|||+|++.+..++++|+++|+++.+|...+     .....+...++.+++++.++....+   +....
T Consensus       210 ~~~~~~~g~D~vid~~g~~~~~~~~~~l~~~G~iv~~G~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  284 (334)
T 3qwb_A          210 LKFTNGKGVDASFDSVGKDTFEISLAALKRKGVFVSFGNASG-----LIPPFSITRLSPKNITLVRPQLYGYIADPEEWK  284 (334)
T ss_dssp             HHHTTTSCEEEEEECCGGGGHHHHHHHEEEEEEEEECCCTTC-----CCCCBCGGGGTTTTCEEECCCGGGGSCSHHHHH
T ss_pred             HHHhCCCCceEEEECCChHHHHHHHHHhccCCEEEEEcCCCC-----CCCCcchhhhhhCceEEEEEEeccccCCHHHHH
Confidence            998877 89999999999999999999999999999998653     2223455667788999998776654   33345


Q ss_pred             HHHHHHHHHHHCCCceeeeeeeecCCcHHHHHHHHhcCCccceEEEEecC
Q 028523          158 KFLEMMIPRIKEGKIVYVEDKAEGLESAPAALVGLFSGRNVGKQVVEVAT  207 (208)
Q Consensus       158 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~~~  207 (208)
                      +.++++++++++|++++.++++|+++++++|++.+.+++..||+||++++
T Consensus       285 ~~~~~~~~l~~~g~l~~~i~~~~~l~~~~~A~~~~~~~~~~gKvvi~~~q  334 (334)
T 3qwb_A          285 YYSDEFFGLVNSKKLNIKIYKTYPLRDYRTAAADIESRKTVGKLVLEIPQ  334 (334)
T ss_dssp             HHHHHHHHHHHTTSSCCCEEEEEEGGGHHHHHHHHHTTCCCBEEEEECCC
T ss_pred             HHHHHHHHHHHCCCccCceeeEEcHHHHHHHHHHHHhCCCceEEEEecCC
Confidence            56789999999999999999999999999999999999999999999864

>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*

Probab=100.00  E-value=4.1e-33  Score=215.13  Aligned_cols=202  Identities=50%  Similarity=0.836  Sum_probs=177.0

Q ss_pred             chhhHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HHhcCCCeeEecCCCccHHHH
Q 028523            2 PGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLL-KNKFGFDEAFNYKEEPDLDAA   80 (208)
Q Consensus         2 ~~~tA~~~l~~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~-~~~~g~~~v~~~~~~~~~~~~   80 (208)
                      +++|||+++.+.+++++|++|||+|++|++|++++|+++..|++|+++++++++.+.+ + ++|++.++|+++. ++.+.
T Consensus       133 ~~~tA~~al~~~~~~~~g~~vlI~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~-~~g~~~~~~~~~~-~~~~~  210 (336)
T 4b7c_A          133 TGMTAYFALLDVGQPKNGETVVISGAAGAVGSVAGQIARLKGCRVVGIAGGAEKCRFLVE-ELGFDGAIDYKNE-DLAAG  210 (336)
T ss_dssp             HHHHHHHHHHHTTCCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH-TTCCSEEEETTTS-CHHHH
T ss_pred             HHHHHHHHHHHhcCCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-HcCCCEEEECCCH-HHHHH
Confidence            4689999998889999999999999999999999999999999999999999999999 6 9999999999887 89999


Q ss_pred             HHhHCCCCccEEEeCCCchhHHHHHHhhccCCEEEEEecccccCCCC-CCCccchHHHhhcceeEEEeeccccccchHHH
Q 028523           81 LKRYFPEGINIYFENVGGKMLDAVLLNMRIQGRITLCGMISQYNNDK-PEGVHNLTCLISKRIRMEGFLVPDYFHLYPKF  159 (208)
Q Consensus        81 ~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (208)
                      +++.+++++|++||++|++.+..++++|+++|+++.+|...+..... .....+...++.+++++.++....+.....+.
T Consensus       211 ~~~~~~~~~d~vi~~~g~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~  290 (336)
T 4b7c_A          211 LKRECPKGIDVFFDNVGGEILDTVLTRIAFKARIVLCGAISQYNNKEAVRGPANYLSLLVNRARMEGMVVMDYAQRFPEG  290 (336)
T ss_dssp             HHHHCTTCEEEEEESSCHHHHHHHHTTEEEEEEEEECCCGGGGC------CCTTTTHHHHTTCEEEECCGGGGGGGHHHH
T ss_pred             HHHhcCCCceEEEECCCcchHHHHHHHHhhCCEEEEEeecccccCCcccccchhHHHHHhCCcEEEEEEhhhhhhhhHHH
Confidence            99888669999999999999999999999999999999866321101 11234556778899999999887664455688


Q ss_pred             HHHHHHHHHCCCceeeeeeeecCCcHHHHHHHHhcCCccceEEEEe
Q 028523          160 LEMMIPRIKEGKIVYVEDKAEGLESAPAALVGLFSGRNVGKQVVEV  205 (208)
Q Consensus       160 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~  205 (208)
                      ++++++++++|.+++.+..+++++++++|++.+.+++..||+||++
T Consensus       291 ~~~~~~l~~~g~l~~~~~~~~~l~~~~~A~~~~~~~~~~gKvvi~~  336 (336)
T 4b7c_A          291 LKEMATWLAEGKLQSREDIVEGLETFPETLLKLFSGENFGKLVLKV  336 (336)
T ss_dssp             HHHHHHHHHTTSSCCCEEEEECGGGHHHHHHHHHTTCCCSEEEEEC
T ss_pred             HHHHHHHHHCCCcccceeeecCHHHHHHHHHHHHcCCCCceEEEeC
Confidence            9999999999999999888899999999999999999999999975

>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}

Probab=100.00  E-value=3.2e-33  Score=216.07  Aligned_cols=195  Identities=19%  Similarity=0.259  Sum_probs=167.2

Q ss_pred             chhhHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHHH
Q 028523            2 PGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAAL   81 (208)
Q Consensus         2 ~~~tA~~~l~~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~~   81 (208)
                      +++|||+++.+.+++++|++|||+|++|++|++++|+++..|++|+++++++++.+.++ ++|++.+++++ . ++.+.+
T Consensus       143 ~~~ta~~~l~~~~~~~~g~~VlV~Gasg~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~-~~ga~~v~~~~-~-~~~~~v  219 (342)
T 4eye_A          143 NYHTMYFAYARRGQLRAGETVLVLGAAGGIGTAAIQIAKGMGAKVIAVVNRTAATEFVK-SVGADIVLPLE-E-GWAKAV  219 (342)
T ss_dssp             HHHHHHHHHHTTSCCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHH-HHTCSEEEESS-T-THHHHH
T ss_pred             HHHHHHHHHHHhcCCCCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-hcCCcEEecCc-h-hHHHHH
Confidence            57899999988899999999999999999999999999999999999999999999999 89999999998 5 899999


Q ss_pred             HhHCCC-CccEEEeCCCchhHHHHHHhhccCCEEEEEecccccCCCCCCCccchHHHhhcceeEEEeecccc----ccch
Q 028523           82 KRYFPE-GINIYFENVGGKMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCLISKRIRMEGFLVPDY----FHLY  156 (208)
Q Consensus        82 ~~~~~~-~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~  156 (208)
                      ++.+++ ++|++|||+|++.+..++++|+++|+++.+|...+.     ....+...++.+++++.|+....+    ++..
T Consensus       220 ~~~~~~~g~Dvvid~~g~~~~~~~~~~l~~~G~iv~~G~~~~~-----~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~  294 (342)
T 4eye_A          220 REATGGAGVDMVVDPIGGPAFDDAVRTLASEGRLLVVGFAAGG-----IPTIKVNRLLLRNASLIGVAWGEFLRTHADYL  294 (342)
T ss_dssp             HHHTTTSCEEEEEESCC--CHHHHHHTEEEEEEEEEC---------------CCCCGGGTTCEEEECCHHHHHHHCTTHH
T ss_pred             HHHhCCCCceEEEECCchhHHHHHHHhhcCCCEEEEEEccCCC-----CCccCHHHHhhcCCEEEEEehhhhhhcCHHHH
Confidence            999888 999999999999999999999999999999876531     122334456788999999887554    4445


Q ss_pred             HHHHHHHHHHHHCCCceeeeeeeecCCcHHHHHHHHhcCCccceEEEEe
Q 028523          157 PKFLEMMIPRIKEGKIVYVEDKAEGLESAPAALVGLFSGRNVGKQVVEV  205 (208)
Q Consensus       157 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~  205 (208)
                      .+.++++.+++++| +++.++++|+++++++|++.+.+++..||+||++
T Consensus       295 ~~~~~~~~~l~~~g-l~~~i~~~~~l~~~~~A~~~~~~~~~~gKvvl~P  342 (342)
T 4eye_A          295 YETQAGLEKLVAEG-MRPPVSARIPLSEGRQALQDFADGKVYGKMVLVP  342 (342)
T ss_dssp             HHHHHHHHHHHHTT-CCCCEEEEEEGGGHHHHHHHHHTTCCCSEEEEEC
T ss_pred             HHHHHHHHHHHHcC-CCCCcceEEeHHHHHHHHHHHHhCCCCceEEEeC
Confidence            67899999999999 9999999999999999999999999999999974

>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*

Probab=100.00  E-value=9e-33  Score=212.23  Aligned_cols=197  Identities=22%  Similarity=0.289  Sum_probs=171.7

Q ss_pred             chhhHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHHH
Q 028523            2 PGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAAL   81 (208)
Q Consensus         2 ~~~tA~~~l~~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~~   81 (208)
                      +++|||+++.+.+++++|++|||+||+|++|++++|+++..|++|+++++++++.+.++ ++|++.++|+++. ++.+.+
T Consensus       124 ~~~ta~~~l~~~~~~~~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~-~~Ga~~~~~~~~~-~~~~~~  201 (325)
T 3jyn_A          124 KGLTVQYLLRQTYQVKPGEIILFHAAAGGVGSLACQWAKALGAKLIGTVSSPEKAAHAK-ALGAWETIDYSHE-DVAKRV  201 (325)
T ss_dssp             HHHHHHHHHHTTSCCCTTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHH-HHTCSEEEETTTS-CHHHHH
T ss_pred             hHHHHHHHHHHhcCCCCCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HcCCCEEEeCCCc-cHHHHH
Confidence            46799999988899999999999999999999999999999999999999999999999 9999999999887 899999


Q ss_pred             HhHCCC-CccEEEeCCCchhHHHHHHhhccCCEEEEEecccccCCCCCCCccchHHHhhc-ceeEEEeecccc---ccch
Q 028523           82 KRYFPE-GINIYFENVGGKMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCLISK-RIRMEGFLVPDY---FHLY  156 (208)
Q Consensus        82 ~~~~~~-~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~---~~~~  156 (208)
                      ++.+++ ++|++|||+|++.+..++++|+++|+++.+|...+     +....+...++.+ ++.+.+.....+   +...
T Consensus       202 ~~~~~~~g~Dvvid~~g~~~~~~~~~~l~~~G~iv~~g~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  276 (325)
T 3jyn_A          202 LELTDGKKCPVVYDGVGQDTWLTSLDSVAPRGLVVSFGNASG-----PVSGVNLGILAQKDSVYVTRPTLGSYANNAQNL  276 (325)
T ss_dssp             HHHTTTCCEEEEEESSCGGGHHHHHTTEEEEEEEEECCCTTC-----CCCSCCTHHHHHTTSCEEECCCHHHHSCSTTHH
T ss_pred             HHHhCCCCceEEEECCChHHHHHHHHHhcCCCEEEEEecCCC-----CCCCCCHHHHhhcCcEEEEeeeeeeecCCHHHH
Confidence            999887 89999999999999999999999999999998653     2223445555555 566665554443   3445


Q ss_pred             HHHHHHHHHHHHCCCceeeeeeeecCCcHHHHHHHHhcCCccceEEEEe
Q 028523          157 PKFLEMMIPRIKEGKIVYVEDKAEGLESAPAALVGLFSGRNVGKQVVEV  205 (208)
Q Consensus       157 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~  205 (208)
                      .+.++++++++++|++++.++++|+++++++|++.+.+++..||+||.+
T Consensus       277 ~~~~~~~~~l~~~g~l~~~i~~~~~l~~~~~A~~~~~~~~~~Gkvvl~p  325 (325)
T 3jyn_A          277 QTMADELFDMLASGKLKVDGIEQYALKDAAKAQIELSARRTTGSTILIP  325 (325)
T ss_dssp             HHHHHHHHHHHHTTSSCCCCCEEEEGGGHHHHHHHHHTTCCCSCEEEEC
T ss_pred             HHHHHHHHHHHHCCCeeCccccEEcHHHHHHHHHHHHcCCCCceEEEeC
Confidence            6678899999999999999999999999999999999999999999974

>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*

Probab=100.00  E-value=1.9e-32  Score=212.17  Aligned_cols=207  Identities=74%  Similarity=1.233  Sum_probs=174.5

Q ss_pred             chhhHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHHH
Q 028523            2 PGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAAL   81 (208)
Q Consensus         2 ~~~tA~~~l~~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~~   81 (208)
                      +++|||+++.+.+++++|++|||+|++|++|++++|+++..|++|+++++++++.+.+++++|++.++|+++.+++.+.+
T Consensus       139 ~~~ta~~al~~~~~~~~g~~vlI~Ga~g~iG~~~~~~a~~~G~~V~~~~~~~~~~~~~~~~~g~~~~~d~~~~~~~~~~~  218 (345)
T 2j3h_A          139 PGMTAYAGFYEVCSPKEGETVYVSAASGAVGQLVGQLAKMMGCYVVGSAGSKEKVDLLKTKFGFDDAFNYKEESDLTAAL  218 (345)
T ss_dssp             HHHHHHHHHHTTSCCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTSCCSEEEETTSCSCSHHHH
T ss_pred             cHHHHHHHHHHHhCCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCceEEecCCHHHHHHHH
Confidence            46799999988899999999999999999999999999999999999999999999887569999999987633677778


Q ss_pred             HhHCCCCccEEEeCCCchhHHHHHHhhccCCEEEEEecccccCCCCCCCccchHHHhhcceeEEEeeccccccchHHHHH
Q 028523           82 KRYFPEGINIYFENVGGKMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCLISKRIRMEGFLVPDYFHLYPKFLE  161 (208)
Q Consensus        82 ~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  161 (208)
                      ++.+++++|++||++|++.+..++++|+++|+++.+|...+.+........+...++.+++++.|+....+.....+.++
T Consensus       219 ~~~~~~~~d~vi~~~g~~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~  298 (345)
T 2j3h_A          219 KRCFPNGIDIYFENVGGKMLDAVLVNMNMHGRIAVCGMISQYNLENQEGVHNLSNIIYKRNRIQGFVVSDFYDKYSKFLE  298 (345)
T ss_dssp             HHHCTTCEEEEEESSCHHHHHHHHTTEEEEEEEEECCCGGGTTCSSCCCBSCTTHHHHHTCEEEECCGGGGGGGHHHHHH
T ss_pred             HHHhCCCCcEEEECCCHHHHHHHHHHHhcCCEEEEEccccccccCCccccccHHHHhhhceeeceeeehhhhhhHHHHHH
Confidence            87775689999999999899999999999999999987654211111223344567788999988776554444567799


Q ss_pred             HHHHHHHCCCceeeeeeeecCCcHHHHHHHHhcCCccceEEEEecCC
Q 028523          162 MMIPRIKEGKIVYVEDKAEGLESAPAALVGLFSGRNVGKQVVEVATE  208 (208)
Q Consensus       162 ~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~~~~  208 (208)
                      ++++++++|++++.+..+++++++.+|++.+.+++..||+|+.++++
T Consensus       299 ~~~~l~~~g~i~~~~~~~~~l~~~~~A~~~~~~~~~~gKvvv~~~~~  345 (345)
T 2j3h_A          299 FVLPHIREGKITYVEDVADGLEKAPEALVGLFHGKNVGKQVVVVARE  345 (345)
T ss_dssp             HHHHHHHTTSSCCCEEEEESGGGSHHHHHHHHTTCCSSEEEEESSCC
T ss_pred             HHHHHHHCCCCcCcccccCCHHHHHHHHHHHHcCCCceEEEEEeCCC
Confidence            99999999999988888899999999999999999899999998764

>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}

Probab=100.00  E-value=6.4e-33  Score=216.00  Aligned_cols=190  Identities=27%  Similarity=0.322  Sum_probs=170.7

Q ss_pred             chhhHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHHH
Q 028523            2 PGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAAL   81 (208)
Q Consensus         2 ~~~tA~~~l~~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~~   81 (208)
                      +++|||+++.+.+++++|++|||+| +|++|++++|+|+..|++|+++++++++.+.++ ++|++.++|+.+. ++.+.+
T Consensus       173 ~~~ta~~al~~~~~~~~g~~VlV~G-~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~-~lGa~~vi~~~~~-~~~~~v  249 (363)
T 3uog_A          173 AGLTAWFALVEKGHLRAGDRVVVQG-TGGVALFGLQIAKATGAEVIVTSSSREKLDRAF-ALGADHGINRLEE-DWVERV  249 (363)
T ss_dssp             HHHHHHHHHTTTTCCCTTCEEEEES-SBHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-HHTCSEEEETTTS-CHHHHH
T ss_pred             HHHHHHHHHHHhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCEEEEEecCchhHHHHH-HcCCCEEEcCCcc-cHHHHH
Confidence            4679999998889999999999999 799999999999999999999999999999998 9999999995545 899999


Q ss_pred             HhHCCC-CccEEEeCCCchhHHHHHHhhccCCEEEEEecccccCCCCCCCccchHHHhhcceeEEEeeccccccchHHHH
Q 028523           82 KRYFPE-GINIYFENVGGKMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCLISKRIRMEGFLVPDYFHLYPKFL  160 (208)
Q Consensus        82 ~~~~~~-~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (208)
                      ++.+++ ++|++|||+|++.+..++++|+++|+++.+|...+     .....+...++.+++++.++....     .+.+
T Consensus       250 ~~~~~g~g~D~vid~~g~~~~~~~~~~l~~~G~iv~~G~~~~-----~~~~~~~~~~~~~~~~i~g~~~~~-----~~~~  319 (363)
T 3uog_A          250 YALTGDRGADHILEIAGGAGLGQSLKAVAPDGRISVIGVLEG-----FEVSGPVGPLLLKSPVVQGISVGH-----RRAL  319 (363)
T ss_dssp             HHHHTTCCEEEEEEETTSSCHHHHHHHEEEEEEEEEECCCSS-----CEECCBTTHHHHTCCEEEECCCCC-----HHHH
T ss_pred             HHHhCCCCceEEEECCChHHHHHHHHHhhcCCEEEEEecCCC-----cccCcCHHHHHhCCcEEEEEecCC-----HHHH
Confidence            999887 99999999999899999999999999999998653     123345567788999999988764     6779


Q ss_pred             HHHHHHHHCCCceeeeeeeecCCcHHHHHHHHhcCCccceEEEEe
Q 028523          161 EMMIPRIKEGKIVYVEDKAEGLESAPAALVGLFSGRNVGKQVVEV  205 (208)
Q Consensus       161 ~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~  205 (208)
                      +++++++++|.+++.++++|+++++++|++.+.+++ .||+||++
T Consensus       320 ~~~~~l~~~g~l~~~i~~~~~l~~~~~A~~~~~~~~-~gKvvi~~  363 (363)
T 3uog_A          320 EDLVGAVDRLGLKPVIDMRYKFTEVPEALAHLDRGP-FGKVVIEF  363 (363)
T ss_dssp             HHHHHHHHHHTCCCCEEEEEEGGGHHHHHHTGGGCC-SBEEEEEC
T ss_pred             HHHHHHHHcCCCccceeeEEcHHHHHHHHHHHHcCC-CccEEEeC
Confidence            999999999999999999999999999999999999 89999985

>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}

Probab=100.00  E-value=5.2e-33  Score=215.75  Aligned_cols=197  Identities=22%  Similarity=0.384  Sum_probs=173.3

Q ss_pred             chhhHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHHH
Q 028523            2 PGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAAL   81 (208)
Q Consensus         2 ~~~tA~~~l~~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~~   81 (208)
                      +++|||+++.+.+++++|++|||+||+|++|++++|+++..|++|+++++++++.+.++ ++|++.++++++. ++.+.+
T Consensus       151 ~~~ta~~~l~~~~~~~~g~~VlV~Gg~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~-~lGa~~~~~~~~~-~~~~~~  228 (353)
T 4dup_A          151 TFFTVWANLFQMAGLTEGESVLIHGGTSGIGTTAIQLARAFGAEVYATAGSTGKCEACE-RLGAKRGINYRSE-DFAAVI  228 (353)
T ss_dssp             HHHHHHHHHTTTTCCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH-HHTCSEEEETTTS-CHHHHH
T ss_pred             HHHHHHHHHHHhcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-hcCCCEEEeCCch-HHHHHH
Confidence            46899999988899999999999999999999999999999999999999999999999 8999999999887 888888


Q ss_pred             HhHCCCCccEEEeCCCchhHHHHHHhhccCCEEEEEecccccCCCCCCCc-cchHHHhhcceeEEEeeccccc-----cc
Q 028523           82 KRYFPEGINIYFENVGGKMLDAVLLNMRIQGRITLCGMISQYNNDKPEGV-HNLTCLISKRIRMEGFLVPDYF-----HL  155 (208)
Q Consensus        82 ~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-----~~  155 (208)
                      ++.+++++|++|||+|++.+..++++|+++|+++.+|...+     .... .+...++.+++++.|+......     ..
T Consensus       229 ~~~~~~g~Dvvid~~g~~~~~~~~~~l~~~G~iv~~g~~~~-----~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~  303 (353)
T 4dup_A          229 KAETGQGVDIILDMIGAAYFERNIASLAKDGCLSIIAFLGG-----AVAEKVNLSPIMVKRLTVTGSTMRPRTAEEKRAI  303 (353)
T ss_dssp             HHHHSSCEEEEEESCCGGGHHHHHHTEEEEEEEEECCCTTC-----SEEEEEECHHHHHTTCEEEECCSTTSCHHHHHHH
T ss_pred             HHHhCCCceEEEECCCHHHHHHHHHHhccCCEEEEEEecCC-----CcccCCCHHHHHhcCceEEEEeccccchhhhHHH
Confidence            88884499999999999999999999999999999997653     1112 4556778899999998876542     12


Q ss_pred             hHHHHHHHHHHHHCCCceeeeeeeecCCcHHHHHHHHhcCCccceEEEEe
Q 028523          156 YPKFLEMMIPRIKEGKIVYVEDKAEGLESAPAALVGLFSGRNVGKQVVEV  205 (208)
Q Consensus       156 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~  205 (208)
                      ..+.++++++++++|++++.++++|+++++++|++.+.+++..||+||++
T Consensus       304 ~~~~~~~~~~l~~~g~l~~~i~~~~~l~~~~~A~~~l~~~~~~gKvvl~~  353 (353)
T 4dup_A          304 RDDLLSEVWPLLEAGTVAPVIHKVFAFEDVADAHRLLEEGSHVGKVMLTV  353 (353)
T ss_dssp             HHHHHHHTHHHHHHTSSCCCEEEEEEGGGHHHHHHHHHHTCCSSEEEEEC
T ss_pred             HHHHHHHHHHHHHCCCccCCcceEEeHHHHHHHHHHHHhCCCCceEEEeC
Confidence            23347889999999999999999999999999999999999999999975

>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}

Probab=100.00  E-value=8.2e-32  Score=208.53  Aligned_cols=195  Identities=22%  Similarity=0.278  Sum_probs=165.5

Q ss_pred             chhhHHHHHHHhcCCC------CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeEecCCCc
Q 028523            2 PGMTAYAGFFEVCSPK------QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEP   75 (208)
Q Consensus         2 ~~~tA~~~l~~~~~~~------~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~   75 (208)
                      +++|||++|.+.++++      +|++|||+||+|++|++++|+++..|++|+++++++++.+.++ ++|++.++++++  
T Consensus       128 ~~~ta~~~l~~~~~~~~~~~~~~g~~VlV~gg~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~-~lGa~~vi~~~~--  204 (346)
T 3fbg_A          128 TGITAYETLFDVFGISRNRNENEGKTLLIINGAGGVGSIATQIAKAYGLRVITTASRNETIEWTK-KMGADIVLNHKE--  204 (346)
T ss_dssp             HHHHHHHHHHTTSCCCSSHHHHTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEECCSHHHHHHHH-HHTCSEEECTTS--
T ss_pred             hHHHHHHHHHHhcCCccccccCCCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-hcCCcEEEECCc--
Confidence            4679999998889998      9999999998999999999999999999999999999999999 899999999875  


Q ss_pred             cHHHHHHhHCCCCccEEEeCCCc-hhHHHHHHhhccCCEEEEEecccccCCCCCCCccchHHHhhcceeEEEeecccc--
Q 028523           76 DLDAALKRYFPEGINIYFENVGG-KMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCLISKRIRMEGFLVPDY--  152 (208)
Q Consensus        76 ~~~~~~~~~~~~~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--  152 (208)
                      ++.+.+++..++++|++|||+|+ ..+..++++|+++|+++.++...        ...+...++.+++++.+......  
T Consensus       205 ~~~~~~~~~~~~g~Dvv~d~~g~~~~~~~~~~~l~~~G~iv~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~  276 (346)
T 3fbg_A          205 SLLNQFKTQGIELVDYVFCTFNTDMYYDDMIQLVKPRGHIATIVAFE--------NDQDLNALKPKSLSFSHEFMFARPL  276 (346)
T ss_dssp             CHHHHHHHHTCCCEEEEEESSCHHHHHHHHHHHEEEEEEEEESSCCS--------SCBCGGGGTTTTCEEEECCTTHHHH
T ss_pred             cHHHHHHHhCCCCccEEEECCCchHHHHHHHHHhccCCEEEEECCCC--------CCCccccccccceEEEEEEEecccc
Confidence            67888888844489999999996 46799999999999999887532        12344566778888888665432  


Q ss_pred             -----ccchHHHHHHHHHHHHCCCceeeeeeee---cCCcHHHHHHHHhcCCccceEEEEecC
Q 028523          153 -----FHLYPKFLEMMIPRIKEGKIVYVEDKAE---GLESAPAALVGLFSGRNVGKQVVEVAT  207 (208)
Q Consensus       153 -----~~~~~~~~~~~~~~~~~g~~~~~~~~~~---~~~~~~~a~~~~~~~~~~gk~vv~~~~  207 (208)
                           .....+.++++++++++|++++.+++++   +++++++|++.+.+++..||+||++++
T Consensus       277 ~~~~~~~~~~~~~~~~~~l~~~g~l~~~i~~~~~~~~l~~~~~A~~~~~~g~~~GKvvl~~~~  339 (346)
T 3fbg_A          277 NQTDDMIKHHEYLEDITNKVEQNIYQPTTTKVIEGLTTENIYQAHQILESNTMIGKLVINLNE  339 (346)
T ss_dssp             TTCTTTHHHHHHHHHHHHHHHTTSSCCCEEEEEESCCHHHHHHHHHHHHTTCCCSEEEEEC--
T ss_pred             cchhhHHHHHHHHHHHHHHHHCCCEECCccceecCCCHHHHHHHHHHHhcCCcceEEEEecCC
Confidence                 1223577899999999999999988877   899999999999999999999999875

>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}

Probab=100.00  E-value=1.2e-31  Score=206.64  Aligned_cols=199  Identities=21%  Similarity=0.290  Sum_probs=171.0

Q ss_pred             chhhHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHHH
Q 028523            2 PGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAAL   81 (208)
Q Consensus         2 ~~~tA~~~l~~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~~   81 (208)
                      +++|||+++.+.+++++|++|||+||+|++|++++|+++..|++|+++++++++.+.++ ++|++.++|+++. ++.+.+
T Consensus       129 ~~~ta~~~l~~~~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~G~~Vi~~~~~~~~~~~~~-~~g~~~~~d~~~~-~~~~~i  206 (333)
T 1wly_A          129 KGMTAQYLLHQTHKVKPGDYVLIHAAAGGMGHIMVPWARHLGATVIGTVSTEEKAETAR-KLGCHHTINYSTQ-DFAEVV  206 (333)
T ss_dssp             HHHHHHHHHHTTSCCCTTCEEEETTTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHHH-HHTCSEEEETTTS-CHHHHH
T ss_pred             hHHHHHHHHHHhhCCCCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HcCCCEEEECCCH-HHHHHH
Confidence            56899999987889999999999999999999999999999999999999999999998 8999999999877 888888


Q ss_pred             HhHCCC-CccEEEeCCCchhHHHHHHhhccCCEEEEEecccccCCCCCCCccchH-HHhhcc--eeEEEeecccc--ccc
Q 028523           82 KRYFPE-GINIYFENVGGKMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLT-CLISKR--IRMEGFLVPDY--FHL  155 (208)
Q Consensus        82 ~~~~~~-~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~-~~~~~~--~~~~~~~~~~~--~~~  155 (208)
                      .+.+.+ ++|++||++|++.+..++++|+++|+++.+|...+     .....+.. .++.++  +++.|+....+  +..
T Consensus       207 ~~~~~~~~~d~vi~~~g~~~~~~~~~~l~~~G~iv~~g~~~~-----~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~  281 (333)
T 1wly_A          207 REITGGKGVDVVYDSIGKDTLQKSLDCLRPRGMCAAYGHASG-----VADPIRVVEDLGVRGSLFITRPALWHYMSNRSE  281 (333)
T ss_dssp             HHHHTTCCEEEEEECSCTTTHHHHHHTEEEEEEEEECCCTTC-----CCCCCCHHHHTTTTTSCEEECCCGGGGSCSHHH
T ss_pred             HHHhCCCCCeEEEECCcHHHHHHHHHhhccCCEEEEEecCCC-----CcCCCChhHhhhhcCCcEEEEEeehhhccCHHH
Confidence            887765 89999999999999999999999999999987542     11224444 567788  88888754221  222


Q ss_pred             hHHHHHHHHHHHHCCCceeeeeeeecCCcHHHHHHHHhcCCccceEEEEecC
Q 028523          156 YPKFLEMMIPRIKEGKIVYVEDKAEGLESAPAALVGLFSGRNVGKQVVEVAT  207 (208)
Q Consensus       156 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~~~  207 (208)
                      ..+.++++++++.+|.+++.++++|+++++++|++.+.+++..||+|+++++
T Consensus       282 ~~~~~~~~~~l~~~g~l~~~i~~~~~l~~~~~A~~~~~~~~~~gKvvi~~~~  333 (333)
T 1wly_A          282 IDEGSKCLFDAVKAGVLHSSVAKTFPLREAAAAHKYMGGRQTIGSIVLLPQA  333 (333)
T ss_dssp             HHHHHHHHHHHHHTTSCCCCEEEEEEGGGHHHHHHHHHHCSCCSEEEEETTC
T ss_pred             HHHHHHHHHHHHHCCCcCCCcceEEeHHHHHHHHHHHHcCCCceEEEEEeCC
Confidence            3567899999999999999999999999999999999998888999999864

>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*

Probab=100.00  E-value=4.5e-31  Score=205.48  Aligned_cols=203  Identities=33%  Similarity=0.583  Sum_probs=171.9

Q ss_pred             chhhHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHHH
Q 028523            2 PGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAAL   81 (208)
Q Consensus         2 ~~~tA~~~l~~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~~   81 (208)
                      +++|||+++.+.+++++|++|||+||+|++|++++|+++..|++|+++++++++.+.++ ++|++.++++++. ++.+.+
T Consensus       147 ~~~ta~~al~~~~~~~~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~-~~Ga~~~~~~~~~-~~~~~~  224 (362)
T 2c0c_A          147 SGTTAYISLKELGGLSEGKKVLVTAAAGGTGQFAMQLSKKAKCHVIGTCSSDEKSAFLK-SLGCDRPINYKTE-PVGTVL  224 (362)
T ss_dssp             HHHHHHHHHHHHTCCCTTCEEEETTTTBTTHHHHHHHHHHTTCEEEEEESSHHHHHHHH-HTTCSEEEETTTS-CHHHHH
T ss_pred             hHHHHHHHHHHhcCCCCCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHHHH-HcCCcEEEecCCh-hHHHHH
Confidence            57899999988889999999999999999999999999999999999999999999999 8999999999877 888888


Q ss_pred             HhHCCCCccEEEeCCCchhHHHHHHhhccCCEEEEEecccccCCCC--CC---CccchHHHhhcceeEEEeeccccccch
Q 028523           82 KRYFPEGINIYFENVGGKMLDAVLLNMRIQGRITLCGMISQYNNDK--PE---GVHNLTCLISKRIRMEGFLVPDYFHLY  156 (208)
Q Consensus        82 ~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~--~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~  156 (208)
                      ++.+++++|++|||+|+..+..++++|+++|+++.+|...+.....  ..   ... ...++.+++++.|+....+....
T Consensus       225 ~~~~~~g~D~vid~~g~~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~i~g~~~~~~~~~~  303 (362)
T 2c0c_A          225 KQEYPEGVDVVYESVGGAMFDLAVDALATKGRLIVIGFISGYQTPTGLSPVKAGTL-PAKLLKKSASVQGFFLNHYLSKY  303 (362)
T ss_dssp             HHHCTTCEEEEEECSCTHHHHHHHHHEEEEEEEEECCCGGGTTSSSCCCCCCCTTH-HHHHHHHTCEEEECCGGGCGGGH
T ss_pred             HHhcCCCCCEEEECCCHHHHHHHHHHHhcCCEEEEEeCCCCcCccccccccccccc-HHHHHhhcceEEEEEhhhhhhhH
Confidence            8877558999999999989999999999999999999865421100  00   011 24567889999998766554444


Q ss_pred             HHHHHHHHHHHHCCCceeeee--------eeecCCcHHHHHHHHhcCCccceEEEEecC
Q 028523          157 PKFLEMMIPRIKEGKIVYVED--------KAEGLESAPAALVGLFSGRNVGKQVVEVAT  207 (208)
Q Consensus       157 ~~~~~~~~~~~~~g~~~~~~~--------~~~~~~~~~~a~~~~~~~~~~gk~vv~~~~  207 (208)
                      .+.++++++++++|++++.+.        +.++++++.+|++.+.+++..||+||++++
T Consensus       304 ~~~~~~~~~l~~~g~l~~~~~~~~~~~~~~~~~l~~~~~A~~~~~~~~~~gKvvv~~~~  362 (362)
T 2c0c_A          304 QAAMSHLLEMCVSGDLVCEVDLGDLSPEGRFTGLESIFRAVNYMYMGKNTGKIVVELPH  362 (362)
T ss_dssp             HHHHHHHHHHHHTTCSCCCEECSTTSTTCSCBSTTHHHHHHHHHHTTCCSBEEEEECCC
T ss_pred             HHHHHHHHHHHHCCCeEeeeccccccccccccCHHHHHHHHHHHHcCCCCceEEEEcCC
Confidence            678999999999999998754        567999999999999998888999999864

>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*

Probab=100.00  E-value=6.4e-31  Score=204.39  Aligned_cols=206  Identities=37%  Similarity=0.626  Sum_probs=174.1

Q ss_pred             chhhHHHHHHHhcCCCCC--CEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHH
Q 028523            2 PGMTAYAGFFEVCSPKQG--EYVFVSAASGAVGQLVGQFAKLVGC-YVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLD   78 (208)
Q Consensus         2 ~~~tA~~~l~~~~~~~~g--~~vli~ga~g~vG~~a~qla~~~g~-~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~   78 (208)
                      +++|||+++.+.+++++|  ++|||+|++|++|++++|+++..|+ +|+++++++++.+.+++++|++.++|+++. ++.
T Consensus       142 ~~~ta~~al~~~~~~~~g~~~~vlI~GasggiG~~~~~~a~~~Ga~~Vi~~~~~~~~~~~~~~~~g~~~~~d~~~~-~~~  220 (357)
T 2zb4_A          142 PGLTSLIGIQEKGHITAGSNKTMVVSGAAGACGSVAGQIGHFLGCSRVVGICGTHEKCILLTSELGFDAAINYKKD-NVA  220 (357)
T ss_dssp             HHHHHHHHHHHHSCCCTTSCCEEEESSTTBHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTSCCSEEEETTTS-CHH
T ss_pred             HHHHHHHHHHHhcCCCCCCccEEEEECCCcHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHcCCceEEecCch-HHH
Confidence            468999999888999999  9999999999999999999999999 999999999999988834999999999876 888


Q ss_pred             HHHHhHCCCCccEEEeCCCchhHHHHHHhhccCCEEEEEecccccCCCCCCCc-c---chHHHhhcceeEEEeecccccc
Q 028523           79 AALKRYFPEGINIYFENVGGKMLDAVLLNMRIQGRITLCGMISQYNNDKPEGV-H---NLTCLISKRIRMEGFLVPDYFH  154 (208)
Q Consensus        79 ~~~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~-~---~~~~~~~~~~~~~~~~~~~~~~  154 (208)
                      +.+.+.+.+++|++|||+|+..+..++++|+++|+++.+|...+.....+... .   ....++.+++++.++....+..
T Consensus       221 ~~~~~~~~~~~d~vi~~~G~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~  300 (357)
T 2zb4_A          221 EQLRESCPAGVDVYFDNVGGNISDTVISQMNENSHIILCGQISQYNKDVPYPPPLSPAIEAIQKERNITRERFLVLNYKD  300 (357)
T ss_dssp             HHHHHHCTTCEEEEEESCCHHHHHHHHHTEEEEEEEEECCCGGGTTSCCCSSCCCCHHHHHHHHHHTCEEEECCGGGGGG
T ss_pred             HHHHHhcCCCCCEEEECCCHHHHHHHHHHhccCcEEEEECCccccccCccccccchhhhhhhhhcceeEEEEeehhhhhH
Confidence            88888876689999999999899999999999999999998654211111000 0   0145678899999987655544


Q ss_pred             chHHHHHHHHHHHHCCCceeeeeeeecCCcHHHHHHHHhcCCccceEEEEecCC
Q 028523          155 LYPKFLEMMIPRIKEGKIVYVEDKAEGLESAPAALVGLFSGRNVGKQVVEVATE  208 (208)
Q Consensus       155 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~~~~  208 (208)
                      ...+.++++++++++|++++.+..+|+++++++|++.+.+++..||+||+++++
T Consensus       301 ~~~~~~~~~~~l~~~g~l~~~~~~~~~l~~~~~A~~~~~~~~~~gKvvi~~~~~  354 (357)
T 2zb4_A          301 KFEPGILQLSQWFKEGKLKIKETVINGLENMGAAFQSMMTGGNIGKQIVCISEE  354 (357)
T ss_dssp             GHHHHHHHHHHHHHTTCCCCCEEEEECGGGHHHHHHHHHTTCCSBEEEEECCCC
T ss_pred             HHHHHHHHHHHHHHcCCCcCccceecCHHHHHHHHHHHHcCCCCceEEEEEecc
Confidence            457789999999999999998878899999999999999998889999998753

>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A

Probab=100.00  E-value=6.4e-32  Score=216.08  Aligned_cols=194  Identities=23%  Similarity=0.237  Sum_probs=168.4

Q ss_pred             chhhHHHHHHHh--cCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeEecCCCcc---
Q 028523            2 PGMTAYAGFFEV--CSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPD---   76 (208)
Q Consensus         2 ~~~tA~~~l~~~--~~~~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~---   76 (208)
                      +++|||+++...  +++++|++|||+|++|++|++++|+|+..|++|+++++++++.+.++ ++|++.++++.+. +   
T Consensus       210 ~~~ta~~al~~~~~~~~~~g~~VlV~GasG~vG~~avqlak~~Ga~vi~~~~~~~~~~~~~-~lGa~~vi~~~~~-d~~~  287 (456)
T 3krt_A          210 VNSTAYRQLVSRNGAGMKQGDNVLIWGASGGLGSYATQFALAGGANPICVVSSPQKAEICR-AMGAEAIIDRNAE-GYRF  287 (456)
T ss_dssp             HHHHHHHHHTSTTTTCCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH-HHTCCEEEETTTT-TCCS
T ss_pred             HHHHHHHHHHhhcccCCCCCCEEEEECCCCHHHHHHHHHHHHcCCeEEEEECCHHHHHHHH-hhCCcEEEecCcC-cccc
Confidence            468999999754  78999999999999999999999999999999999999999999998 9999999998874 3   


Q ss_pred             --------------HHHHHHhHCCC-CccEEEeCCCchhHHHHHHhhccCCEEEEEecccccCCCCCCCccchHHHhhcc
Q 028523           77 --------------LDAALKRYFPE-GINIYFENVGGKMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCLISKR  141 (208)
Q Consensus        77 --------------~~~~~~~~~~~-~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~  141 (208)
                                    +.+.+++.+++ ++|++|||+|++.+..++++++++|+++.+|...+     .....+...++.++
T Consensus       288 ~~~~~~~~~~~~~~~~~~i~~~t~g~g~Dvvid~~G~~~~~~~~~~l~~~G~iv~~G~~~~-----~~~~~~~~~~~~~~  362 (456)
T 3krt_A          288 WKDENTQDPKEWKRFGKRIRELTGGEDIDIVFEHPGRETFGASVFVTRKGGTITTCASTSG-----YMHEYDNRYLWMSL  362 (456)
T ss_dssp             EEETTEECHHHHHHHHHHHHHHHTSCCEEEEEECSCHHHHHHHHHHEEEEEEEEESCCTTC-----SEEEEEHHHHHHTT
T ss_pred             cccccccchHHHHHHHHHHHHHhCCCCCcEEEEcCCchhHHHHHHHhhCCcEEEEEecCCC-----cccccCHHHHHhcC
Confidence                          34778888876 99999999999999999999999999999987653     22234556677888


Q ss_pred             eeEEEeeccccccchHHHHHHHHHHHHCCCceeeeeeeecCCcHHHHHHHHhcCCccceEEEEecC
Q 028523          142 IRMEGFLVPDYFHLYPKFLEMMIPRIKEGKIVYVEDKAEGLESAPAALVGLFSGRNVGKQVVEVAT  207 (208)
Q Consensus       142 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~~~  207 (208)
                      +++.|+....     .+.+.++++++++|.+++.++++|+|+++++|++.+.+++..||+||.+.+
T Consensus       363 ~~i~g~~~~~-----~~~~~~~~~l~~~g~l~~~i~~~~~l~~~~eA~~~l~~~~~~GKvvv~~~~  423 (456)
T 3krt_A          363 KRIIGSHFAN-----YREAWEANRLIAKGRIHPTLSKVYSLEDTGQAAYDVHRNLHQGKVGVLCLA  423 (456)
T ss_dssp             CEEEECCSCC-----HHHHHHHHHHHHTTSSCCCEEEEEEGGGHHHHHHHHHTTCSSSEEEEESSC
T ss_pred             eEEEEeccCC-----HHHHHHHHHHHHcCCcccceeEEEcHHHHHHHHHHHHhCCCCCcEEEEeCC
Confidence            8999888765     344567899999999999999999999999999999999999999998753

>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*

Probab=100.00  E-value=3e-31  Score=205.92  Aligned_cols=198  Identities=25%  Similarity=0.394  Sum_probs=169.4

Q ss_pred             chhhHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHHH
Q 028523            2 PGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAAL   81 (208)
Q Consensus         2 ~~~tA~~~l~~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~~   81 (208)
                      +++|||+++.+.+++++|++|||+||+|++|++++|+++..|++|+++++++++.+.++ ++|++.++|+.+. ++.+.+
T Consensus       146 ~~~tA~~al~~~~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~-~~g~~~~~~~~~~-~~~~~~  223 (354)
T 2j8z_A          146 AWLTAFQLLHLVGNVQAGDYVLIHAGLSGVGTAAIQLTRMAGAIPLVTAGSQKKLQMAE-KLGAAAGFNYKKE-DFSEAT  223 (354)
T ss_dssp             HHHHHHHHHTTTSCCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-HHTCSEEEETTTS-CHHHHH
T ss_pred             hHHHHHHHHHHhcCCCCCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-HcCCcEEEecCCh-HHHHHH
Confidence            56899999988899999999999999999999999999999999999999999999997 8999999999887 888888


Q ss_pred             HhHCCC-CccEEEeCCCchhHHHHHHhhccCCEEEEEecccccCCCCCCCccch-HHHhhcceeEEEeecccccc-----
Q 028523           82 KRYFPE-GINIYFENVGGKMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNL-TCLISKRIRMEGFLVPDYFH-----  154 (208)
Q Consensus        82 ~~~~~~-~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~-----  154 (208)
                      .+.+++ ++|++|||+|++.+..++++|+++|+++.+|...+.     ....+. ..++.+++++.++.......     
T Consensus       224 ~~~~~~~~~d~vi~~~G~~~~~~~~~~l~~~G~iv~~G~~~~~-----~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~  298 (354)
T 2j8z_A          224 LKFTKGAGVNLILDCIGGSYWEKNVNCLALDGRWVLYGLMGGG-----DINGPLFSKLLFKRGSLITSLLRSRDNKYKQM  298 (354)
T ss_dssp             HHHTTTSCEEEEEESSCGGGHHHHHHHEEEEEEEEECCCTTCS-----CCCSCHHHHHHHTTCEEEECCSTTCCHHHHHH
T ss_pred             HHHhcCCCceEEEECCCchHHHHHHHhccCCCEEEEEeccCCC-----ccCCChhHHHHhCCCEEEEEEcccccccccHH
Confidence            888776 899999999988999999999999999999976531     123445 56778999999987654321     


Q ss_pred             chHHHHHHHHHHHHCC---CceeeeeeeecCCcHHHHHHHHhcCCccceEEEEec
Q 028523          155 LYPKFLEMMIPRIKEG---KIVYVEDKAEGLESAPAALVGLFSGRNVGKQVVEVA  206 (208)
Q Consensus       155 ~~~~~~~~~~~~~~~g---~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~~  206 (208)
                      ...+.++++++++++|   .+++.++++|+++++++|++.+.+++..||+|++++
T Consensus       299 ~~~~~~~~~~~l~~~g~~~~l~~~i~~~~~l~~~~~A~~~~~~~~~~gKvvv~~~  353 (354)
T 2j8z_A          299 LVNAFTEQILPHFSTEGPQRLLPVLDRIYPVTEIQEAHKYMEANKNIGKIVLELP  353 (354)
T ss_dssp             HHHHHHHHTGGGGTC---CCCCCCEEEEEEGGGHHHHHHHHHTTCCSSEEEEECC
T ss_pred             HHHHHHHHHHHHHHcCCCccccCccceEEcHHHHHHHHHHHHhCCCCceEEEecC
Confidence            1123345688999999   999999999999999999999999888899999875

>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}

Probab=100.00  E-value=2.8e-31  Score=205.37  Aligned_cols=192  Identities=28%  Similarity=0.362  Sum_probs=168.6

Q ss_pred             chhhHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHHH
Q 028523            2 PGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAAL   81 (208)
Q Consensus         2 ~~~tA~~~l~~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~~   81 (208)
                      +++|||+++.+.+++++|++|||+|++|++|++++|+++..|++|+++++++++.+.++ ++|++.++|+++. ++.+.+
T Consensus       150 ~~~ta~~al~~~~~~~~g~~vlV~Gasg~iG~~~~~~a~~~G~~Vi~~~~~~~~~~~~~-~~ga~~~~d~~~~-~~~~~~  227 (343)
T 2eih_A          150 TFLTAWQMVVDKLGVRPGDDVLVMAAGSGVSVAAIQIAKLFGARVIATAGSEDKLRRAK-ALGADETVNYTHP-DWPKEV  227 (343)
T ss_dssp             HHHHHHHHHTTTSCCCTTCEEEECSTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHHH-HHTCSEEEETTST-THHHHH
T ss_pred             hHHHHHHHHHHhcCCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-hcCCCEEEcCCcc-cHHHHH
Confidence            46899999977779999999999999999999999999999999999999999999998 8999999999876 888888


Q ss_pred             HhHCCC-CccEEEeCCCchhHHHHHHhhccCCEEEEEecccccCCCCCCCccchHHHhhcceeEEEeeccccccchHHHH
Q 028523           82 KRYFPE-GINIYFENVGGKMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCLISKRIRMEGFLVPDYFHLYPKFL  160 (208)
Q Consensus        82 ~~~~~~-~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (208)
                      ++.+++ ++|++||++|++.+..++++|+++|+++.+|...+.     ....+...++.+++++.|+....     .+.+
T Consensus       228 ~~~~~~~~~d~vi~~~g~~~~~~~~~~l~~~G~~v~~g~~~~~-----~~~~~~~~~~~~~~~~~g~~~~~-----~~~~  297 (343)
T 2eih_A          228 RRLTGGKGADKVVDHTGALYFEGVIKATANGGRIAIAGASSGY-----EGTLPFAHVFYRQLSILGSTMAS-----KSRL  297 (343)
T ss_dssp             HHHTTTTCEEEEEESSCSSSHHHHHHHEEEEEEEEESSCCCSC-----CCCCCTTHHHHTTCEEEECCSCC-----GGGH
T ss_pred             HHHhCCCCceEEEECCCHHHHHHHHHhhccCCEEEEEecCCCC-----cCccCHHHHHhCCcEEEEecCcc-----HHHH
Confidence            888766 899999999988899999999999999999876531     11244556778899998876432     4568


Q ss_pred             HHHHHHHHCCCceeeeeeeecCCcHHHHHHHHhcCCccceEEEEe
Q 028523          161 EMMIPRIKEGKIVYVEDKAEGLESAPAALVGLFSGRNVGKQVVEV  205 (208)
Q Consensus       161 ~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~  205 (208)
                      +++++++++|.+++.++++|+++++++|++.+.+++..||+|+++
T Consensus       298 ~~~~~l~~~g~l~~~i~~~~~l~~~~~A~~~~~~~~~~gKvvv~~  342 (343)
T 2eih_A          298 FPILRFVEEGKLKPVVGQVLPLEAAAEGHRLLEERRVFGKVVLQV  342 (343)
T ss_dssp             HHHHHHHHHTSSCCCEEEEEEGGGHHHHHHHHHTTCSSSEEEEEC
T ss_pred             HHHHHHHHcCCCCCceeEEeeHHHHHHHHHHHHcCCCceEEEEec
Confidence            899999999999999999999999999999999988889999986

>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*

Probab=99.98  E-value=7e-31  Score=203.54  Aligned_cols=190  Identities=21%  Similarity=0.305  Sum_probs=166.4

Q ss_pred             chhhHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHH
Q 028523            2 PGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLV-GCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAA   80 (208)
Q Consensus         2 ~~~tA~~~l~~~~~~~~g~~vli~ga~g~vG~~a~qla~~~-g~~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~   80 (208)
                      +++|||+++ +.+++++|++|||+|+ |++|.+++|+++.+ |++|+++++++++.+.++ ++|++.++|+++. ++.++
T Consensus       148 ~~~ta~~~l-~~~~~~~g~~VlV~Ga-G~~g~~a~~~a~~~~g~~Vi~~~~~~~r~~~~~-~~Ga~~~i~~~~~-~~~~~  223 (348)
T 4eez_A          148 AGVTTYKAI-KVSGVKPGDWQVIFGA-GGLGNLAIQYAKNVFGAKVIAVDINQDKLNLAK-KIGADVTINSGDV-NPVDE  223 (348)
T ss_dssp             HHHHHHHHH-HHHTCCTTCEEEEECC-SHHHHHHHHHHHHTSCCEEEEEESCHHHHHHHH-HTTCSEEEEC-CC-CHHHH
T ss_pred             ceeeEEeee-cccCCCCCCEEEEEcC-CCccHHHHHHHHHhCCCEEEEEECcHHHhhhhh-hcCCeEEEeCCCC-CHHHH
Confidence            467999999 5678999999999996 99999999999876 569999999999999999 9999999999988 99999


Q ss_pred             HHhHCCC-CccEEEeCCCc-hhHHHHHHhhccCCEEEEEecccccCCCCCCCccchHHHhhcceeEEEeeccccccchHH
Q 028523           81 LKRYFPE-GINIYFENVGG-KMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCLISKRIRMEGFLVPDYFHLYPK  158 (208)
Q Consensus        81 ~~~~~~~-~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  158 (208)
                      +++.+++ ++|.+++++++ ..+..++++++++|+++.+|....      ....+...++.+++++.|+...+     .+
T Consensus       224 v~~~t~g~g~d~~~~~~~~~~~~~~~~~~l~~~G~~v~~g~~~~------~~~~~~~~~~~~~~~i~gs~~~~-----~~  292 (348)
T 4eez_A          224 IKKITGGLGVQSAIVCAVARIAFEQAVASLKPMGKMVAVAVPNT------EMTLSVPTVVFDGVEVAGSLVGT-----RL  292 (348)
T ss_dssp             HHHHTTSSCEEEEEECCSCHHHHHHHHHTEEEEEEEEECCCCSC------EEEECHHHHHHSCCEEEECCSCC-----HH
T ss_pred             hhhhcCCCCceEEEEeccCcchhheeheeecCCceEEEEeccCC------CCccCHHHHHhCCeEEEEEecCC-----HH
Confidence            9999988 99999999885 689999999999999999987542      23456677888999999987765     56


Q ss_pred             HHHHHHHHHHCCCceeeeeeeecCCcHHHHHHHHhcCCccceEEEEecC
Q 028523          159 FLEMMIPRIKEGKIVYVEDKAEGLESAPAALVGLFSGRNVGKQVVEVAT  207 (208)
Q Consensus       159 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~~~  207 (208)
                      .++++++++++|+++|.+ ++|+|+++++|++.+++++..||+||+|++
T Consensus       293 ~~~~~~~l~~~g~i~p~~-~~~~l~~~~~A~~~l~~g~~~GKvVl~~sk  340 (348)
T 4eez_A          293 DLAEAFQFGAEGKVKPIV-ATRKLEEINDIIDEMKAGKIEGRMVIDFTK  340 (348)
T ss_dssp             HHHHHHHHHHTTSCCCCE-EEECGGGHHHHHHHHHTTCCSSEEEEECC-
T ss_pred             HHHHHHHHHHcCCCEEEE-EEEeHHHHHHHHHHHHCCCCccEEEEEccc
Confidence            688999999999999765 689999999999999999999999999863

>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1

Probab=99.98  E-value=5.6e-31  Score=204.75  Aligned_cols=185  Identities=22%  Similarity=0.316  Sum_probs=162.2

Q ss_pred             chhhHHHHHHHh-cCCCCCCEEEEecCCchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHH
Q 028523            2 PGMTAYAGFFEV-CSPKQGEYVFVSAASGAVGQLVGQFAKLV-GCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDA   79 (208)
Q Consensus         2 ~~~tA~~~l~~~-~~~~~g~~vli~ga~g~vG~~a~qla~~~-g~~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~   79 (208)
                      +++|||+++.+. +++++|++|||+|+ |++|++++|+|+.+ |++|+++++++++.+.++ ++|+++++|+++.  +.+
T Consensus       169 ~~~ta~~al~~~~~~~~~g~~VlV~Ga-G~vG~~avqlak~~~Ga~Vi~~~~~~~~~~~~~-~lGa~~vi~~~~~--~~~  244 (359)
T 1h2b_A          169 AGITAYRAVKKAARTLYPGAYVAIVGV-GGLGHIAVQLLKVMTPATVIALDVKEEKLKLAE-RLGADHVVDARRD--PVK  244 (359)
T ss_dssp             HHHHHHHHHHHHHTTCCTTCEEEEECC-SHHHHHHHHHHHHHCCCEEEEEESSHHHHHHHH-HTTCSEEEETTSC--HHH
T ss_pred             hHHHHHHHHHhhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHH-HhCCCEEEeccch--HHH
Confidence            356899999776 89999999999998 99999999999999 999999999999999999 9999999998863  777


Q ss_pred             HHHhHCCC-CccEEEeCCCch---hHHHHHHhhccCCEEEEEecccccCCCCCCCccchHHHhhcceeEEEeeccccccc
Q 028523           80 ALKRYFPE-GINIYFENVGGK---MLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCLISKRIRMEGFLVPDYFHL  155 (208)
Q Consensus        80 ~~~~~~~~-~~d~v~d~~g~~---~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  155 (208)
                      .+++.+++ ++|++||++|++   .+..++++  ++|+++.+|...+     +  ..+...++.+++++.++....    
T Consensus       245 ~v~~~~~g~g~Dvvid~~G~~~~~~~~~~~~~--~~G~~v~~g~~~~-----~--~~~~~~~~~~~~~i~g~~~~~----  311 (359)
T 1h2b_A          245 QVMELTRGRGVNVAMDFVGSQATVDYTPYLLG--RMGRLIIVGYGGE-----L--RFPTIRVISSEVSFEGSLVGN----  311 (359)
T ss_dssp             HHHHHTTTCCEEEEEESSCCHHHHHHGGGGEE--EEEEEEECCCSSC-----C--CCCHHHHHHTTCEEEECCSCC----
T ss_pred             HHHHHhCCCCCcEEEECCCCchHHHHHHHhhc--CCCEEEEEeCCCC-----C--CCCHHHHHhCCcEEEEecCCC----
Confidence            88888877 899999999976   78888877  9999999987542     1  345566788999999877644    


Q ss_pred             hHHHHHHHHHHHHCCCceeeeeeeecCCcHHHHHHHHhcCCccceEEEEe
Q 028523          156 YPKFLEMMIPRIKEGKIVYVEDKAEGLESAPAALVGLFSGRNVGKQVVEV  205 (208)
Q Consensus       156 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~  205 (208)
                       .+.++++++++++|.+++.+ ++|+++++++|++.+.+++..||+||++
T Consensus       312 -~~~~~~~~~l~~~g~l~~~i-~~~~l~~~~~A~~~~~~~~~~gKvvv~~  359 (359)
T 1h2b_A          312 -YVELHELVTLALQGKVRVEV-DIHKLDEINDVLERLEKGEVLGRAVLIP  359 (359)
T ss_dssp             -HHHHHHHHHHHHTTSCCCCE-EEEEGGGHHHHHHHHHTTCCSSEEEEEC
T ss_pred             -HHHHHHHHHHHHcCCCcceE-EEEeHHHHHHHHHHHHcCCCceEEEeeC
Confidence             56789999999999999988 8999999999999999998889999974

>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}

Probab=99.98  E-value=4.7e-31  Score=203.85  Aligned_cols=197  Identities=14%  Similarity=0.245  Sum_probs=165.2

Q ss_pred             chhhHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHHH
Q 028523            2 PGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAAL   81 (208)
Q Consensus         2 ~~~tA~~~l~~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~~   81 (208)
                      +++|||+++.+.+++++|++|||+|++|++|++++|+++..|++|+++++++++.+.++ ++|++.++|+++. ++.+.+
T Consensus       128 ~~~ta~~~~~~~~~~~~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~-~lga~~~~~~~~~-~~~~~~  205 (340)
T 3gms_A          128 NPLTAWVTCTETLNLQRNDVLLVNACGSAIGHLFAQLSQILNFRLIAVTRNNKHTEELL-RLGAAYVIDTSTA-PLYETV  205 (340)
T ss_dssp             HHHHHHHHHHTTSCCCTTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSSTTHHHHH-HHTCSEEEETTTS-CHHHHH
T ss_pred             hHHHHHHHHHHhcccCCCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-hCCCcEEEeCCcc-cHHHHH
Confidence            46799999988899999999999999889999999999999999999999999999999 8999999999887 899999


Q ss_pred             HhHCCC-CccEEEeCCCchhHHHHHHhhccCCEEEEEecccccCCCCCCCccchHHHh-hcceeEEEeecccc-----cc
Q 028523           82 KRYFPE-GINIYFENVGGKMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCLI-SKRIRMEGFLVPDY-----FH  154 (208)
Q Consensus        82 ~~~~~~-~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~-----~~  154 (208)
                      ++.+++ ++|++|||+|++.....+++|+++|+++.+|...+.       ..+...+. ..++.+..+....+     +.
T Consensus       206 ~~~~~~~g~Dvvid~~g~~~~~~~~~~l~~~G~iv~~G~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  278 (340)
T 3gms_A          206 MELTNGIGADAAIDSIGGPDGNELAFSLRPNGHFLTIGLLSGI-------QVNWAEIVTKAKVHANIFHLRHWNDEVSPY  278 (340)
T ss_dssp             HHHTTTSCEEEEEESSCHHHHHHHHHTEEEEEEEEECCCTTSC-------CCCHHHHHHTSCCEEEECCHHHHHHHSCHH
T ss_pred             HHHhCCCCCcEEEECCCChhHHHHHHHhcCCCEEEEEeecCCC-------CCCHHHhhhcccceEEEEEehhhhhhcCHH
Confidence            999887 999999999988778888999999999999986531       12222222 24455555544332     22


Q ss_pred             chHHHHHHHHHHHHCCCcee-eeeeeecCCcHHHHHHHHhcCC-ccceEEEEecC
Q 028523          155 LYPKFLEMMIPRIKEGKIVY-VEDKAEGLESAPAALVGLFSGR-NVGKQVVEVAT  207 (208)
Q Consensus       155 ~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~a~~~~~~~~-~~gk~vv~~~~  207 (208)
                      ...+.++++++++++|++++ .++++|+++++++|++.+.+++ ..||+|+++.+
T Consensus       279 ~~~~~~~~~~~l~~~g~l~~~~i~~~~~l~~~~~A~~~~~~~~~~~GKvvl~~~~  333 (340)
T 3gms_A          279 KWQETFRHLIRLVENEQLRFMKVHSTYELADVKAAVDVVQSAEKTKGKVFLTSYE  333 (340)
T ss_dssp             HHHHHHHHHHHHHHTTSSCCCCEEEEEEGGGHHHHHHHHHCTTCCSSEEEEECC-
T ss_pred             HHHHHHHHHHHHHHcCCCccccccEEEeHHHHHHHHHHHHhcCCCCCeEEEEEec
Confidence            33578999999999999997 4788999999999999999998 45999999865

>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*

Probab=99.98  E-value=4.9e-31  Score=203.76  Aligned_cols=189  Identities=21%  Similarity=0.313  Sum_probs=166.2

Q ss_pred             chhhHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHHH
Q 028523            2 PGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAAL   81 (208)
Q Consensus         2 ~~~tA~~~l~~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~~   81 (208)
                      +++|||+++ +.+++++|++|||+|+ |++|++++|+|+..|++|+++++++++.+.++ ++|++.++|+++. ++.+.+
T Consensus       151 ~~~ta~~~l-~~~~~~~g~~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~-~lGa~~~i~~~~~-~~~~~~  226 (340)
T 3s2e_A          151 AGVTVYKGL-KVTDTRPGQWVVISGI-GGLGHVAVQYARAMGLRVAAVDIDDAKLNLAR-RLGAEVAVNARDT-DPAAWL  226 (340)
T ss_dssp             HHHHHHHHH-HTTTCCTTSEEEEECC-STTHHHHHHHHHHTTCEEEEEESCHHHHHHHH-HTTCSEEEETTTS-CHHHHH
T ss_pred             hhHHHHHHH-HHcCCCCCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHH-HcCCCEEEeCCCc-CHHHHH
Confidence            467999999 6679999999999996 99999999999999999999999999999999 9999999999987 888888


Q ss_pred             HhHCCCCccEEEeCCC-chhHHHHHHhhccCCEEEEEecccccCCCCCCCccchHHHhhcceeEEEeeccccccchHHHH
Q 028523           82 KRYFPEGINIYFENVG-GKMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCLISKRIRMEGFLVPDYFHLYPKFL  160 (208)
Q Consensus        82 ~~~~~~~~d~v~d~~g-~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (208)
                      ++ +.+++|++||++| .+.+..++++|+++|+++.+|...+      ....+...++.+++++.++....     .+.+
T Consensus       227 ~~-~~g~~d~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~------~~~~~~~~~~~~~~~i~g~~~~~-----~~~~  294 (340)
T 3s2e_A          227 QK-EIGGAHGVLVTAVSPKAFSQAIGMVRRGGTIALNGLPPG------DFGTPIFDVVLKGITIRGSIVGT-----RSDL  294 (340)
T ss_dssp             HH-HHSSEEEEEESSCCHHHHHHHHHHEEEEEEEEECSCCSS------EEEEEHHHHHHTTCEEEECCSCC-----HHHH
T ss_pred             HH-hCCCCCEEEEeCCCHHHHHHHHHHhccCCEEEEeCCCCC------CCCCCHHHHHhCCeEEEEEecCC-----HHHH
Confidence            87 3348999999998 5789999999999999999987542      23345667788999999987765     6779


Q ss_pred             HHHHHHHHCCCceeeeeeeecCCcHHHHHHHHhcCCccceEEEEecC
Q 028523          161 EMMIPRIKEGKIVYVEDKAEGLESAPAALVGLFSGRNVGKQVVEVAT  207 (208)
Q Consensus       161 ~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~~~  207 (208)
                      +++++++++|++++.+ ++++++++++|++.+++++..||+||++++
T Consensus       295 ~~~~~l~~~g~l~~~~-~~~~l~~~~~A~~~~~~~~~~Gkvvv~~~~  340 (340)
T 3s2e_A          295 QESLDFAAHGDVKATV-STAKLDDVNDVFGRLREGKVEGRVVLDFSR  340 (340)
T ss_dssp             HHHHHHHHTTSCCCCE-EEECGGGHHHHHHHHHTTCCCSEEEEECCC
T ss_pred             HHHHHHHHhCCCCceE-EEEeHHHHHHHHHHHHcCCCceEEEEecCC
Confidence            9999999999999865 467999999999999999999999999874

>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*

Probab=99.98  E-value=4.6e-31  Score=204.30  Aligned_cols=188  Identities=19%  Similarity=0.255  Sum_probs=164.2

Q ss_pred             chhhHHHHHHH-hcCCCCCCEEEEecCCchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHH
Q 028523            2 PGMTAYAGFFE-VCSPKQGEYVFVSAASGAVGQLVGQFAKLV-GCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDA   79 (208)
Q Consensus         2 ~~~tA~~~l~~-~~~~~~g~~vli~ga~g~vG~~a~qla~~~-g~~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~   79 (208)
                      +++|||+++.+ .+.+++|++|+|+|+ |++|++++|+|+.. |++|+++++++++.+.++ ++|++.++++++  ++.+
T Consensus       154 ~~~ta~~~l~~~~~~~~~g~~vlv~Ga-G~vG~~a~qla~~~g~~~Vi~~~~~~~~~~~~~-~lGa~~~i~~~~--~~~~  229 (345)
T 3jv7_A          154 AGLTPYHAISRVLPLLGPGSTAVVIGV-GGLGHVGIQILRAVSAARVIAVDLDDDRLALAR-EVGADAAVKSGA--GAAD  229 (345)
T ss_dssp             TTHHHHHHHHTTGGGCCTTCEEEEECC-SHHHHHHHHHHHHHCCCEEEEEESCHHHHHHHH-HTTCSEEEECST--THHH
T ss_pred             hHHHHHHHHHHhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHH-HcCCCEEEcCCC--cHHH
Confidence            57899999977 458999999999997 99999999999999 669999999999999999 999999999875  7888


Q ss_pred             HHHhHCCC-CccEEEeCCCch-hHHHHHHhhccCCEEEEEecccccCCCCCCCccchHHHhhcceeEEEeeccccccchH
Q 028523           80 ALKRYFPE-GINIYFENVGGK-MLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCLISKRIRMEGFLVPDYFHLYP  157 (208)
Q Consensus        80 ~~~~~~~~-~~d~v~d~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  157 (208)
                      .+++.+++ ++|++||++|++ .+..++++|+++|+++.+|...+.     ....+. .++.+++++.++....     .
T Consensus       230 ~v~~~t~g~g~d~v~d~~G~~~~~~~~~~~l~~~G~iv~~G~~~~~-----~~~~~~-~~~~~~~~i~g~~~~~-----~  298 (345)
T 3jv7_A          230 AIRELTGGQGATAVFDFVGAQSTIDTAQQVVAVDGHISVVGIHAGA-----HAKVGF-FMIPFGASVVTPYWGT-----R  298 (345)
T ss_dssp             HHHHHHGGGCEEEEEESSCCHHHHHHHHHHEEEEEEEEECSCCTTC-----CEEEST-TTSCTTCEEECCCSCC-----H
T ss_pred             HHHHHhCCCCCeEEEECCCCHHHHHHHHHHHhcCCEEEEECCCCCC-----CCCcCH-HHHhCCCEEEEEecCC-----H
Confidence            89988887 999999999975 899999999999999999976531     222333 5677889998887654     5


Q ss_pred             HHHHHHHHHHHCCCceeeeeeeecCCcHHHHHHHHhcCCccceEEEEe
Q 028523          158 KFLEMMIPRIKEGKIVYVEDKAEGLESAPAALVGLFSGRNVGKQVVEV  205 (208)
Q Consensus       158 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~  205 (208)
                      +.++++++++++|.+++ +.++|+++++++|++.+.+++..||+||++
T Consensus       299 ~~~~~~~~l~~~g~l~~-~~~~~~l~~~~~A~~~~~~~~~~Gkvvv~p  345 (345)
T 3jv7_A          299 SELMEVVALARAGRLDI-HTETFTLDEGPAAYRRLREGSIRGRGVVVP  345 (345)
T ss_dssp             HHHHHHHHHHHTTCCCC-CEEEECSTTHHHHHHHHHHTCCSSEEEECC
T ss_pred             HHHHHHHHHHHcCCCce-EEEEEcHHHHHHHHHHHHcCCCceeEEeCC
Confidence            77899999999999998 457999999999999999999999999964

>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1

Probab=99.98  E-value=7.5e-31  Score=203.38  Aligned_cols=195  Identities=24%  Similarity=0.318  Sum_probs=167.6

Q ss_pred             chhhHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHHH
Q 028523            2 PGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAAL   81 (208)
Q Consensus         2 ~~~tA~~~l~~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~~   81 (208)
                      +++|||+++.+.+++++|++|||+|++|++|++++|+++..|++|+++++++++.+.++ ++|++.++|+++. ++.+.+
T Consensus       154 ~~~ta~~al~~~~~~~~g~~vlV~GasggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~-~~ga~~~~d~~~~-~~~~~~  231 (351)
T 1yb5_A          154 PYFTAYRALIHSACVKAGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQKIVL-QNGAHEVFNHREV-NYIDKI  231 (351)
T ss_dssp             HHHHHHHHHHTTSCCCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH-HTTCSEEEETTST-THHHHH
T ss_pred             HHHHHHHHHHHhhCCCCcCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChhHHHHHH-HcCCCEEEeCCCc-hHHHHH
Confidence            57899999987899999999999999999999999999999999999999999999888 8999999999877 888888


Q ss_pred             HhHCCC-CccEEEeCCCchhHHHHHHhhccCCEEEEEecccccCCCCCCCccchHHHhhcceeEEEeecccc-ccchHHH
Q 028523           82 KRYFPE-GINIYFENVGGKMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCLISKRIRMEGFLVPDY-FHLYPKF  159 (208)
Q Consensus        82 ~~~~~~-~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~  159 (208)
                      .+.+++ ++|++|||+|++.+..++++++++|+++.+|...       ....+...++.+++++.++..... +....+.
T Consensus       232 ~~~~~~~~~D~vi~~~G~~~~~~~~~~l~~~G~iv~~g~~~-------~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~  304 (351)
T 1yb5_A          232 KKYVGEKGIDIIIEMLANVNLSKDLSLLSHGGRVIVVGSRG-------TIEINPRDTMAKESSIIGVTLFSSTKEEFQQY  304 (351)
T ss_dssp             HHHHCTTCEEEEEESCHHHHHHHHHHHEEEEEEEEECCCCS-------CEEECTHHHHTTTCEEEECCGGGCCHHHHHHH
T ss_pred             HHHcCCCCcEEEEECCChHHHHHHHHhccCCCEEEEEecCC-------CCccCHHHHHhCCcEEEEEEeecCCHHHHHHH
Confidence            887776 8999999999888999999999999999998632       122344567788999999865433 3445666


Q ss_pred             HHHHHHHHHCCCceeeeeeeecCCcHHHHHHH-HhcCCccceEEEEe
Q 028523          160 LEMMIPRIKEGKIVYVEDKAEGLESAPAALVG-LFSGRNVGKQVVEV  205 (208)
Q Consensus       160 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~-~~~~~~~gk~vv~~  205 (208)
                      ++.+.+++.+|.+++.++++|+++++++|++. ++++...||+||++
T Consensus       305 ~~~l~~~~~~g~l~~~i~~~~~l~~~~~A~~~~~~~~~~~gKvvi~~  351 (351)
T 1yb5_A          305 AAALQAGMEIGWLKPVIGSQYPLEKVAEAHENIIHGSGATGKMILLL  351 (351)
T ss_dssp             HHHHHHHHHHTCCCCCEEEEEEGGGHHHHHHHHHHSSCCSSEEEEEC
T ss_pred             HHHHHHHHHCCCccCccceEEcHHHHHHHHHHHHHhCCCCeEEEEeC
Confidence            77888899999999999999999999999998 66667789999974

>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}

Probab=99.98  E-value=8.2e-31  Score=205.18  Aligned_cols=195  Identities=18%  Similarity=0.223  Sum_probs=165.3

Q ss_pred             chhhHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHhcCCCeeEecC--CCccHH
Q 028523            2 PGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGC-YVVGSAGSKDKVDLLKNKFGFDEAFNYK--EEPDLD   78 (208)
Q Consensus         2 ~~~tA~~~l~~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g~-~v~~~~~s~~~~~~~~~~~g~~~v~~~~--~~~~~~   78 (208)
                      ++.|||+++.+.+++++|++|||+|+ |++|++++|+|+.+|+ +|+++++++++++.++ ++|++++++++  +. ++.
T Consensus       177 ~~~ta~~al~~~~~~~~g~~VlV~Ga-G~vG~~a~q~a~~~Ga~~Vi~~~~~~~~~~~a~-~lGa~~vi~~~~~~~-~~~  253 (378)
T 3uko_A          177 GVPTGLGAVWNTAKVEPGSNVAIFGL-GTVGLAVAEGAKTAGASRIIGIDIDSKKYETAK-KFGVNEFVNPKDHDK-PIQ  253 (378)
T ss_dssp             HHHHHHHHHHTTTCCCTTCCEEEECC-SHHHHHHHHHHHHHTCSCEEEECSCTTHHHHHH-TTTCCEEECGGGCSS-CHH
T ss_pred             hHHHHHHHHHhhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHH-HcCCcEEEccccCch-hHH
Confidence            56799999988899999999999997 9999999999999999 8999999999999999 99999999997  44 899


Q ss_pred             HHHHhHCCCCccEEEeCCCc-hhHHHHHHhhccC-CEEEEEecccccCCCCCCCccchHHHhhcceeEEEeeccccccch
Q 028523           79 AALKRYFPEGINIYFENVGG-KMLDAVLLNMRIQ-GRITLCGMISQYNNDKPEGVHNLTCLISKRIRMEGFLVPDYFHLY  156 (208)
Q Consensus        79 ~~~~~~~~~~~d~v~d~~g~-~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  156 (208)
                      +.+++.+++++|++|||+|+ +.+..++++++++ |+++.+|....    ......+...++ +++++.|+....+.  .
T Consensus       254 ~~i~~~~~gg~D~vid~~g~~~~~~~~~~~l~~g~G~iv~~G~~~~----~~~~~~~~~~~~-~~~~i~g~~~~~~~--~  326 (378)
T 3uko_A          254 EVIVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAAS----GQEISTRPFQLV-TGRVWKGTAFGGFK--S  326 (378)
T ss_dssp             HHHHHHTTSCBSEEEECSCCHHHHHHHHHTBCTTTCEEEECSCCCT----TCCEEECTHHHH-TTCEEEECSGGGCC--H
T ss_pred             HHHHHhcCCCCCEEEECCCCHHHHHHHHHHhhccCCEEEEEcccCC----CCccccCHHHHh-cCcEEEEEEecCCC--c
Confidence            99999988899999999997 6899999999996 99999997542    122223333444 48888888765432  2


Q ss_pred             HHHHHHHHHHHHCCCcee--eeeeeecCCcHHHHHHHHhcCCccceEEEEecC
Q 028523          157 PKFLEMMIPRIKEGKIVY--VEDKAEGLESAPAALVGLFSGRNVGKQVVEVAT  207 (208)
Q Consensus       157 ~~~~~~~~~~~~~g~~~~--~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~~~  207 (208)
                      .+.++++++++++|++++  .++++|+|+++++|++.+.+++.. |+||++++
T Consensus       327 ~~~~~~~~~l~~~g~l~~~~~i~~~~~l~~~~~A~~~~~~g~~~-Kvvi~~~~  378 (378)
T 3uko_A          327 RTQVPWLVEKYMNKEIKVDEYITHNLTLGEINKAFDLLHEGTCL-RCVLDTSK  378 (378)
T ss_dssp             HHHHHHHHHHHHTTSSCCGGGEEEEEEGGGHHHHHHHTTCTTCS-EEEEETTC
T ss_pred             hHHHHHHHHHHHcCCCChhHheeeEeeHHHHHHHHHHHHCCCce-EEEEecCC
Confidence            567899999999999874  578899999999999999988875 99999864

>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=99.98  E-value=9e-31  Score=201.32  Aligned_cols=197  Identities=24%  Similarity=0.249  Sum_probs=168.1

Q ss_pred             chhhHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHHH
Q 028523            2 PGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAAL   81 (208)
Q Consensus         2 ~~~tA~~~l~~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~~   81 (208)
                      +++|||+++.+.+++++|++|||+||+|++|++++|+++..|++|+++++++++.+.++ ++|++.++|+++. ++.+.+
T Consensus       124 ~~~ta~~al~~~~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~G~~V~~~~~~~~~~~~~~-~~g~~~~~~~~~~-~~~~~~  201 (327)
T 1qor_A          124 KGLTVYYLLRKTYEIKPDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQSAL-KAGAWQVINYREE-DLVERL  201 (327)
T ss_dssp             HHHHHHHHHHTTSCCCTTCEEEESSTTBHHHHHHHHHHHHHTCEEEEEESSHHHHHHHH-HHTCSEEEETTTS-CHHHHH
T ss_pred             HHHHHHHHHHHhhCCCCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-HcCCCEEEECCCc-cHHHHH
Confidence            56899999987889999999999999999999999999999999999999999999998 8999999999877 888888


Q ss_pred             HhHCCC-CccEEEeCCCchhHHHHHHhhccCCEEEEEecccccCCCCCCCccchHHHhhc-ceeEEEeecccc---ccch
Q 028523           82 KRYFPE-GINIYFENVGGKMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCLISK-RIRMEGFLVPDY---FHLY  156 (208)
Q Consensus        82 ~~~~~~-~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~---~~~~  156 (208)
                      .+.+.+ ++|++||++|++.+..++++|+++|+++.+|...+.     ....+...++.+ ++++.+.....+   +...
T Consensus       202 ~~~~~~~~~D~vi~~~g~~~~~~~~~~l~~~G~iv~~g~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  276 (327)
T 1qor_A          202 KEITGGKKVRVVYDSVGRDTWERSLDCLQRRGLMVSFGNSSGA-----VTGVNLGILNQKGSLYVTRPSLQGYITTREEL  276 (327)
T ss_dssp             HHHTTTCCEEEEEECSCGGGHHHHHHTEEEEEEEEECCCTTCC-----CCCBCTHHHHHTTSCEEECCCHHHHCCSHHHH
T ss_pred             HHHhCCCCceEEEECCchHHHHHHHHHhcCCCEEEEEecCCCC-----CCccCHHHHhhccceEEEccchhhhcCCHHHH
Confidence            888766 899999999988999999999999999999976531     122444556666 777766544322   2223


Q ss_pred             HHHHHHHHHHHHCCCceeeee--eeecCCcHHHHHHHHhcCCccceEEEEe
Q 028523          157 PKFLEMMIPRIKEGKIVYVED--KAEGLESAPAALVGLFSGRNVGKQVVEV  205 (208)
Q Consensus       157 ~~~~~~~~~~~~~g~~~~~~~--~~~~~~~~~~a~~~~~~~~~~gk~vv~~  205 (208)
                      .+.++++++++++|.+++.++  ++|+++++.+|++.+.+++..||+||++
T Consensus       277 ~~~~~~~~~l~~~g~l~~~i~~~~~~~l~~~~~A~~~~~~~~~~gKvvl~~  327 (327)
T 1qor_A          277 TEASNELFSLIASGVIKVDVAEQQKYPLKDAQRAHEILESRATQGSSLLIP  327 (327)
T ss_dssp             HHHHHHHHHHHHTTSSCCCCCGGGEEEGGGHHHHHHHHHTTCCCBCCEEEC
T ss_pred             HHHHHHHHHHHHCCCcccccccCcEEcHHHHHHHHHHHHhCCCCceEEEeC
Confidence            567899999999999999988  8999999999999999988889999874

>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*

Probab=99.98  E-value=2.6e-30  Score=199.25  Aligned_cols=202  Identities=48%  Similarity=0.802  Sum_probs=170.0

Q ss_pred             chhhHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeEecCC-CccHHHH
Q 028523            2 PGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKE-EPDLDAA   80 (208)
Q Consensus         2 ~~~tA~~~l~~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~v~~~~~-~~~~~~~   80 (208)
                      +++|||+++.+.+++++|++|||+|++|++|++++|+++..|++|+++++++++.+.++ ++|++.++|+.+ . ++.+.
T Consensus       129 ~~~ta~~al~~~~~~~~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~~-~~g~~~~~d~~~~~-~~~~~  206 (333)
T 1v3u_A          129 PGLTAYFGLLEVCGVKGGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAYLK-QIGFDAAFNYKTVN-SLEEA  206 (333)
T ss_dssp             HHHHHHHHHHTTSCCCSSCEEEEESTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH-HTTCSEEEETTSCS-CHHHH
T ss_pred             hHHHHHHHHHHhhCCCCCCEEEEecCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-hcCCcEEEecCCHH-HHHHH
Confidence            46799999988889999999999999999999999999999999999999999999997 899998999987 5 88888


Q ss_pred             HHhHCCCCccEEEeCCCchhHHHHHHhhccCCEEEEEecccccCCCC-CCCccchHHHhhcceeEEEeecccc-ccchHH
Q 028523           81 LKRYFPEGINIYFENVGGKMLDAVLLNMRIQGRITLCGMISQYNNDK-PEGVHNLTCLISKRIRMEGFLVPDY-FHLYPK  158 (208)
Q Consensus        81 ~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~  158 (208)
                      +.+.+.+++|++||++|++.+..++++|+++|+++.+|...+.+... +....+...++.+++++.|+....+ +....+
T Consensus       207 ~~~~~~~~~d~vi~~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~  286 (333)
T 1v3u_A          207 LKKASPDGYDCYFDNVGGEFLNTVLSQMKDFGKIAICGAISVYNRMDQLPPGPSPESIIYKQLRIEGFIVYRWQGDVREK  286 (333)
T ss_dssp             HHHHCTTCEEEEEESSCHHHHHHHHTTEEEEEEEEECCCCC-------CCBCCCHHHHHHTTCEEEECCGGGCCTHHHHH
T ss_pred             HHHHhCCCCeEEEECCChHHHHHHHHHHhcCCEEEEEeccccccCCCCCCCCcCHHHHhhcCceEEEEehhhcchHHHHH
Confidence            88877668999999999888999999999999999998765321000 1111245567789999999876544 234467


Q ss_pred             HHHHHHHHHHCCCceeeeeeeecCCcHHHHHHHHhcCCccceEEEEe
Q 028523          159 FLEMMIPRIKEGKIVYVEDKAEGLESAPAALVGLFSGRNVGKQVVEV  205 (208)
Q Consensus       159 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~  205 (208)
                      .++++++++++|++++.+..+++++++++|++.+.+++..||+||++
T Consensus       287 ~~~~~~~l~~~g~l~~~~~~~~~l~~~~~A~~~~~~~~~~gKvvl~~  333 (333)
T 1v3u_A          287 ALRDLMKWVLEGKIQYHEHVTKGFENMPAAFIEMLNGANLGKAVVTA  333 (333)
T ss_dssp             HHHHHHHHHHTTSSCCCEEEEECGGGHHHHHHHHHTTCCSBEEEEEC
T ss_pred             HHHHHHHHHHCCCccCccccccCHHHHHHHHHHHHcCCCCceEEEeC
Confidence            88999999999999988777889999999999999998889999974

>1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A

Probab=99.98  E-value=1.9e-31  Score=207.89  Aligned_cols=197  Identities=18%  Similarity=0.262  Sum_probs=163.2

Q ss_pred             chhhHHHHHHHhcCCCCC-CEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHH----HHHHHHhcCCCeeEecCC---
Q 028523            2 PGMTAYAGFFEVCSPKQG-EYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDK----VDLLKNKFGFDEAFNYKE---   73 (208)
Q Consensus         2 ~~~tA~~~l~~~~~~~~g-~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~----~~~~~~~~g~~~v~~~~~---   73 (208)
                      +++|||+++.+.+++++| ++|||+|++|++|++++|+|+.+|++|++++++.++    .+.++ ++|++.++++++   
T Consensus       150 ~~~ta~~~l~~~~~~~~g~~~VlV~Ga~G~vG~~aiqlak~~Ga~vi~~~~~~~~~~~~~~~~~-~lGa~~vi~~~~~~~  228 (364)
T 1gu7_A          150 NPLTAYLMLTHYVKLTPGKDWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDRPNLDEVVASLK-ELGATQVITEDQNNS  228 (364)
T ss_dssp             HHHHHHHHHHSSSCCCTTTCEEEESCTTSHHHHHHHHHHHHHTCEEEEEECCCTTHHHHHHHHH-HHTCSEEEEHHHHHC
T ss_pred             cHHHHHHHHHHhhccCCCCcEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCccccHHHHHHHH-hcCCeEEEecCccch
Confidence            478999999887899999 999999999999999999999999999999866554    57777 999999999875   


Q ss_pred             CccHHHHHHhHC--CC-CccEEEeCCCchhHHHHHHhhccCCEEEEEecccccCCCCCCCccchHHHhhcceeEEEeecc
Q 028523           74 EPDLDAALKRYF--PE-GINIYFENVGGKMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCLISKRIRMEGFLVP  150 (208)
Q Consensus        74 ~~~~~~~~~~~~--~~-~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  150 (208)
                      . ++.+.+++.+  ++ ++|++|||+|++....++++|+++|+++.+|...+     .....+...++.+++++.++...
T Consensus       229 ~-~~~~~i~~~t~~~~~g~Dvvid~~G~~~~~~~~~~l~~~G~~v~~g~~~~-----~~~~~~~~~~~~~~~~~~g~~~~  302 (364)
T 1gu7_A          229 R-EFGPTIKEWIKQSGGEAKLALNCVGGKSSTGIARKLNNNGLMLTYGGMSF-----QPVTIPTSLYIFKNFTSAGFWVT  302 (364)
T ss_dssp             G-GGHHHHHHHHHHHTCCEEEEEESSCHHHHHHHHHTSCTTCEEEECCCCSS-----CCEEECHHHHHHSCCEEEECCHH
T ss_pred             H-HHHHHHHHHhhccCCCceEEEECCCchhHHHHHHHhccCCEEEEecCCCC-----CCcccCHHHHhhcCcEEEEEchh
Confidence            4 7778888877  44 89999999998766789999999999999987542     12234455677799999998765


Q ss_pred             cc----ccchHHHHHHHHHHHHCCCceeeeeeeecCC---cHHHHHHHHhcCCccceEEEEe
Q 028523          151 DY----FHLYPKFLEMMIPRIKEGKIVYVEDKAEGLE---SAPAALVGLFSGRNVGKQVVEV  205 (208)
Q Consensus       151 ~~----~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~---~~~~a~~~~~~~~~~gk~vv~~  205 (208)
                      .+    +....+.++++++++++|.+++.+..+++++   ++.+|++.+.+++..||+||++
T Consensus       303 ~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~~~~~~~~~l~~~~~A~~~~~~~~~~gKvvv~~  364 (364)
T 1gu7_A          303 ELLKNNKELKTSTLNQIIAWYEEGKLTDAKSIETLYDGTKPLHELYQDGVANSKDGKQLITY  364 (364)
T ss_dssp             HHHTTCHHHHHHHHHHHHHHHHHTCCCCCCCEEEECCSSSCHHHHHHHHHHTGGGSCEEEEC
T ss_pred             HhcccCHHHHHHHHHHHHHHHHcCCcccccceEEecCchhhHHHHHHHHHhCCCCceEEEeC
Confidence            43    2223567899999999999998776777664   9999999999988889999975

>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}

Probab=99.97  E-value=6.4e-31  Score=203.26  Aligned_cols=192  Identities=18%  Similarity=0.311  Sum_probs=165.4

Q ss_pred             chhhHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHHH
Q 028523            2 PGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAAL   81 (208)
Q Consensus         2 ~~~tA~~~l~~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~~   81 (208)
                      +++|||+++.+.+++++|++|||+||+|++|++++|+++..|++|+++ .++++.+.++ ++|++. ++ ++. ++.+.+
T Consensus       134 ~~~ta~~~l~~~~~~~~g~~VlV~Ga~g~iG~~~~q~a~~~Ga~Vi~~-~~~~~~~~~~-~lGa~~-i~-~~~-~~~~~~  208 (343)
T 3gaz_A          134 VFITAWEGLVDRAQVQDGQTVLIQGGGGGVGHVAIQIALARGARVFAT-ARGSDLEYVR-DLGATP-ID-ASR-EPEDYA  208 (343)
T ss_dssp             HHHHHHHHHTTTTCCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEE-ECHHHHHHHH-HHTSEE-EE-TTS-CHHHHH
T ss_pred             hHHHHHHHHHHhcCCCCCCEEEEecCCCHHHHHHHHHHHHCCCEEEEE-eCHHHHHHHH-HcCCCE-ec-cCC-CHHHHH
Confidence            467999999888999999999999999999999999999999999999 7999999998 899988 77 555 888888


Q ss_pred             HhHCCC-CccEEEeCCCchhHHHHHHhhccCCEEEEEecccccCCCCCCCccchHHHhhcceeEEEeecccc------cc
Q 028523           82 KRYFPE-GINIYFENVGGKMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCLISKRIRMEGFLVPDY------FH  154 (208)
Q Consensus        82 ~~~~~~-~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~  154 (208)
                      ++.+++ ++|++|||+|++.+..++++|+++|+++.+|...         ..+...++.+++++.++.....      +.
T Consensus       209 ~~~~~~~g~D~vid~~g~~~~~~~~~~l~~~G~iv~~g~~~---------~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~  279 (343)
T 3gaz_A          209 AEHTAGQGFDLVYDTLGGPVLDASFSAVKRFGHVVSCLGWG---------THKLAPLSFKQATYSGVFTLHTLLANEGLA  279 (343)
T ss_dssp             HHHHTTSCEEEEEESSCTHHHHHHHHHEEEEEEEEESCCCS---------CCCCHHHHHTTCEEEECCTTHHHHHTCSHH
T ss_pred             HHHhcCCCceEEEECCCcHHHHHHHHHHhcCCeEEEEcccC---------ccccchhhhcCcEEEEEEeccchhcccchH
Confidence            888877 8999999999999999999999999999988753         1234567788999988765321      22


Q ss_pred             chHHHHHHHHHHHHCCCceeeee-eeecCCcHHHHHHHHhcCCc----cceEEEEecC
Q 028523          155 LYPKFLEMMIPRIKEGKIVYVED-KAEGLESAPAALVGLFSGRN----VGKQVVEVAT  207 (208)
Q Consensus       155 ~~~~~~~~~~~~~~~g~~~~~~~-~~~~~~~~~~a~~~~~~~~~----~gk~vv~~~~  207 (208)
                      ...+.++++++++++|.+++.++ ++|+++++++|++.+.+++.    .||+|++++.
T Consensus       280 ~~~~~~~~~~~l~~~g~l~~~i~~~~~~l~~~~~A~~~~~~~~~~Gr~~GK~v~~~~~  337 (343)
T 3gaz_A          280 HFGEMLREADALVQTGKLAPRLDPRTFSIAEIGSAYDAVLGRNDVPRQRGKIAITVEG  337 (343)
T ss_dssp             HHHHHHHHHHHHHHTTCCCCCBCSCCEETTCHHHHHHHHHTCTTCCCCSSBCEEECC-
T ss_pred             HHHHHHHHHHHHHHCCCcccCccCcEecHHHHHHHHHHHHcCCCcccccceEEEEecc
Confidence            34578999999999999999998 79999999999999998764    7899998864

>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A

Probab=99.97  E-value=4e-31  Score=211.15  Aligned_cols=194  Identities=23%  Similarity=0.210  Sum_probs=166.5

Q ss_pred             chhhHHHHHHHh--cCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeEecCCCcc---
Q 028523            2 PGMTAYAGFFEV--CSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPD---   76 (208)
Q Consensus         2 ~~~tA~~~l~~~--~~~~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~---   76 (208)
                      +++|||+++...  +++++|++|||+|++|++|++++|+++..|++|+++++++++.+.++ ++|++.++++.+. +   
T Consensus       202 ~~~tA~~al~~~~~~~~~~g~~VlV~GasG~iG~~a~qla~~~Ga~vi~~~~~~~~~~~~~-~lGa~~~i~~~~~-~~~~  279 (447)
T 4a0s_A          202 CAGTAYRMLVSDRGAQMKQGDIVLIWGASGGLGSYAIQFVKNGGGIPVAVVSSAQKEAAVR-ALGCDLVINRAEL-GITD  279 (447)
T ss_dssp             HHHHHHHHHTSTTTTCCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH-HTTCCCEEEHHHH-TCCT
T ss_pred             HHHHHHHHHHhhhccCCCCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-hcCCCEEEecccc-cccc
Confidence            467999999743  89999999999999999999999999999999999999999999998 9999999887643 2   


Q ss_pred             ---------------HHHHHHhHCCCCccEEEeCCCchhHHHHHHhhccCCEEEEEecccccCCCCCCCccchHHHhhcc
Q 028523           77 ---------------LDAALKRYFPEGINIYFENVGGKMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCLISKR  141 (208)
Q Consensus        77 ---------------~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~  141 (208)
                                     +.+.+++.++.++|++||++|++.+..++.+++++|+++.+|...+     .....+...++.++
T Consensus       280 ~~~~~~~~~~~~~~~~~~~v~~~~g~g~Dvvid~~G~~~~~~~~~~l~~~G~iv~~G~~~~-----~~~~~~~~~~~~~~  354 (447)
T 4a0s_A          280 DIADDPRRVVETGRKLAKLVVEKAGREPDIVFEHTGRVTFGLSVIVARRGGTVVTCGSSSG-----YLHTFDNRYLWMKL  354 (447)
T ss_dssp             TGGGCHHHHHHHHHHHHHHHHHHHSSCCSEEEECSCHHHHHHHHHHSCTTCEEEESCCTTC-----SEEEEEHHHHHHTT
T ss_pred             cccccccccchhhhHHHHHHHHHhCCCceEEEECCCchHHHHHHHHHhcCCEEEEEecCCC-----cccccCHHHHHhCC
Confidence                           2567777774489999999999899999999999999999987643     22234556677888


Q ss_pred             eeEEEeeccccccchHHHHHHHHHHHHCCCceeeeeeeecCCcHHHHHHHHhcCCccceEEEEecC
Q 028523          142 IRMEGFLVPDYFHLYPKFLEMMIPRIKEGKIVYVEDKAEGLESAPAALVGLFSGRNVGKQVVEVAT  207 (208)
Q Consensus       142 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~~~  207 (208)
                      +++.|+....     .+.+.++++++++|.+++.++++|+++++++|++.+.+++..||+||.+.+
T Consensus       355 ~~i~g~~~~~-----~~~~~~~~~l~~~g~l~~~i~~~~~l~~~~~A~~~~~~~~~~GKvvv~~~~  415 (447)
T 4a0s_A          355 KKIVGSHGAN-----HEEQQATNRLFESGAVVPAMSAVYPLAEAAEACRVVQTSRQVGKVAVLCMA  415 (447)
T ss_dssp             CEEEECCSCC-----HHHHHHHHHHHHTTSSCCCEEEEEEGGGHHHHHHHHHTTCCSSEEEEESSC
T ss_pred             CEEEecCCCC-----HHHHHHHHHHHHcCCcccceeEEEcHHHHHHHHHHHhcCCCceEEEEEeCC
Confidence            8998887655     445678999999999999999999999999999999999999999998754

>4a27_A Synaptic vesicle membrane protein VAT-1 homolog-L; oxidoreductase; 2.10A {Homo sapiens}

Probab=99.97  E-value=3.5e-31  Score=205.25  Aligned_cols=202  Identities=27%  Similarity=0.335  Sum_probs=159.5

Q ss_pred             chhhHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcC-CEEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHH
Q 028523            2 PGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVG-CYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAA   80 (208)
Q Consensus         2 ~~~tA~~~l~~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g-~~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~   80 (208)
                      +++|||+++.+.+++++|++|||+|++|++|++++|+|+..| ++|++++ ++++.+.++  +|++.+++ ++. ++.+.
T Consensus       126 ~~~ta~~~l~~~~~~~~g~~VlV~Ga~G~vG~~a~qla~~~g~~~V~~~~-~~~~~~~~~--~ga~~~~~-~~~-~~~~~  200 (349)
T 4a27_A          126 NFVTAYVMLFEVANLREGMSVLVHSAGGGVGQAVAQLCSTVPNVTVFGTA-STFKHEAIK--DSVTHLFD-RNA-DYVQE  200 (349)
T ss_dssp             HHHHHHHHHHTTSCCCTTCEEEESSTTSHHHHHHHHHHTTSTTCEEEEEE-CGGGHHHHG--GGSSEEEE-TTS-CHHHH
T ss_pred             HHHHHHHHHHHhcCCCCCCEEEEEcCCcHHHHHHHHHHHHcCCcEEEEeC-CHHHHHHHH--cCCcEEEc-CCc-cHHHH
Confidence            468999999888999999999999999999999999999996 5899888 777777665  89999998 555 89999


Q ss_pred             HHhHCCCCccEEEeCCCchhHHHHHHhhccCCEEEEEecccccCCCC-----------CCCccchHHHhhcceeEEEeec
Q 028523           81 LKRYFPEGINIYFENVGGKMLDAVLLNMRIQGRITLCGMISQYNNDK-----------PEGVHNLTCLISKRIRMEGFLV  149 (208)
Q Consensus        81 ~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~  149 (208)
                      +++.+++++|++|||+|++.+..++++|+++|+++.+|.........           .....+...++.++.++.++..
T Consensus       201 ~~~~~~~g~Dvv~d~~g~~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~i~g~~~  280 (349)
T 4a27_A          201 VKRISAEGVDIVLDCLCGDNTGKGLSLLKPLGTYILYGSSNMVTGETKSFFSFAKSWWQVEKVNPIKLYEENKVIAGFSL  280 (349)
T ss_dssp             HHHHCTTCEEEEEEECC-------CTTEEEEEEEEEEC-------------------------CHHHHHHHTCEEEEECH
T ss_pred             HHHhcCCCceEEEECCCchhHHHHHHHhhcCCEEEEECCCcccccccccccccccccccccccCHHHHhhcCceEEEEee
Confidence            99888779999999999888899999999999999999754211000           0112445667788899999887


Q ss_pred             ccc-c-----cchHHHHHHHHHHHHCCCceeeeeeeecCCcHHHHHHHHhcCCccceEEEEecCC
Q 028523          150 PDY-F-----HLYPKFLEMMIPRIKEGKIVYVEDKAEGLESAPAALVGLFSGRNVGKQVVEVATE  208 (208)
Q Consensus       150 ~~~-~-----~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~~~~  208 (208)
                      ..+ .     ....+.++++++++++|++++.++++|+++++++|++.+.+++..||+||+++++
T Consensus       281 ~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~i~~~~~l~~~~~A~~~l~~~~~~GKvvi~~~~~  345 (349)
T 4a27_A          281 LNLLFKQGRAGLIRGVVEKLIGLYNQKKIKPVVDSLWALEEVKEAMQRIHDRGNIGKLILDVEKT  345 (349)
T ss_dssp             HHHHHTSCCHHHHHHHHHHHHHHHHTTSCCCCEEEEECGGGHHHHHHHHHTTCCSSEEEEETTCC
T ss_pred             hheeccccchHHHHHHHHHHHHHHHCCCccccccceECHHHHHHHHHHHHhCCCCceEEEecCCC
Confidence            543 1     2336789999999999999999999999999999999999999999999999764

>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*

Probab=99.97  E-value=2.6e-32  Score=209.68  Aligned_cols=194  Identities=19%  Similarity=0.230  Sum_probs=162.9

Q ss_pred             chhhHHHHHHHh--cCCCCCC-EEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHH
Q 028523            2 PGMTAYAGFFEV--CSPKQGE-YVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLD   78 (208)
Q Consensus         2 ~~~tA~~~l~~~--~~~~~g~-~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~   78 (208)
                      +++|||++|...  .++++++ .|||+|++|++|++++|+|+..|++|+++++++++.++++ ++|+++++|+++. +. 
T Consensus       127 ~~~ta~~al~~~~~~~~~~~~g~VlV~Ga~G~vG~~aiqla~~~Ga~Vi~~~~~~~~~~~~~-~lGa~~vi~~~~~-~~-  203 (324)
T 3nx4_A          127 AGFTAMLCVMALEDAGIRPQDGEVVVTGASGGVGSTAVALLHKLGYQVAAVSGRESTHGYLK-SLGANRILSRDEF-AE-  203 (324)
T ss_dssp             HHHHHHHHHHHHHHTTCCGGGCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHHH-HHTCSEEEEGGGS-SC-
T ss_pred             HHHHHHHHHHHhhhcccCCCCCeEEEECCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-hcCCCEEEecCCH-HH-
Confidence            467899988643  4566632 4999999999999999999999999999999999999999 9999999998865 32 


Q ss_pred             HHHHhHCCCCccEEEeCCCchhHHHHHHhhccCCEEEEEecccccCCCCCCCccchHHHhhcceeEEEeecccc-ccchH
Q 028523           79 AALKRYFPEGINIYFENVGGKMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCLISKRIRMEGFLVPDY-FHLYP  157 (208)
Q Consensus        79 ~~~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~  157 (208)
                        +++.+++++|++|||+|++.+..++++|+++|+++.+|...+     .....+...++.+++++.++..... +....
T Consensus       204 --~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~iv~~G~~~~-----~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~  276 (324)
T 3nx4_A          204 --SRPLEKQLWAGAIDTVGDKVLAKVLAQMNYGGCVAACGLAGG-----FALPTTVMPFILRNVRLQGVDSVMTPPARRA  276 (324)
T ss_dssp             --CCSSCCCCEEEEEESSCHHHHHHHHHTEEEEEEEEECCCTTC-----SEEEEESHHHHHHCCEEEECCSTTCCHHHHH
T ss_pred             --HHhhcCCCccEEEECCCcHHHHHHHHHHhcCCEEEEEecCCC-----CCCCCCHHHHhhcCeEEEEEeccccChHHHH
Confidence              455555689999999999899999999999999999998653     1223455677889999999876543 33345


Q ss_pred             HHHHHHHHHHHCCCceeeeeeeecCCcHHHHHHHHhcCCccceEEEEec
Q 028523          158 KFLEMMIPRIKEGKIVYVEDKAEGLESAPAALVGLFSGRNVGKQVVEVA  206 (208)
Q Consensus       158 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~~  206 (208)
                      +.++++.+++++|.+++. +++|+++++++|++.+.+++..||+||+++
T Consensus       277 ~~~~~~~~l~~~g~l~~~-~~~~~l~~~~~A~~~~~~~~~~gkvvv~~~  324 (324)
T 3nx4_A          277 EAWARLVKDLPESFYAQA-ATEITLADAPKFADAIINNQVQGRTLVKIK  324 (324)
T ss_dssp             HHHHHHHHHSCHHHHHHH-EEEEEGGGHHHHHHHHHTTCCCSEEEEECC
T ss_pred             HHHHHHHHHHHcCCCCCC-ceeEeHHHHHHHHHHHHhCCCCceEEEecC
Confidence            778999999999999987 889999999999999999999999999875

>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}

Probab=99.97  E-value=1.1e-30  Score=203.39  Aligned_cols=193  Identities=18%  Similarity=0.199  Sum_probs=164.5

Q ss_pred             chhhHHHHHHHhcCCC-----CCCEEEEecCCchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHhcCCCeeEecCCCc
Q 028523            2 PGMTAYAGFFEVCSPK-----QGEYVFVSAASGAVGQLVGQFAKLV-GCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEP   75 (208)
Q Consensus         2 ~~~tA~~~l~~~~~~~-----~g~~vli~ga~g~vG~~a~qla~~~-g~~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~   75 (208)
                      +++|||+++.+.++++     +|++|||+||+|++|++++|+|+.+ |++|+++++++++.+.++ ++|++.++++++  
T Consensus       150 ~~~ta~~al~~~~~~~~~~~~~g~~VlV~Ga~G~vG~~a~qlak~~~g~~Vi~~~~~~~~~~~~~-~lGad~vi~~~~--  226 (363)
T 4dvj_A          150 TSITAWEAFFDRLDVNKPVPGAAPAILIVGGAGGVGSIAVQIARQRTDLTVIATASRPETQEWVK-SLGAHHVIDHSK--  226 (363)
T ss_dssp             HHHHHHHHHHTTSCTTSCCTTSEEEEEEESTTSHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHH-HTTCSEEECTTS--
T ss_pred             HHHHHHHHHHHhhCcCcCcCCCCCEEEEECCCCHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHH-HcCCCEEEeCCC--
Confidence            4679999998888898     8999999999999999999999985 889999999999999999 899999999875  


Q ss_pred             cHHHHHHhHCCCCccEEEeCCCc-hhHHHHHHhhccCCEEEEEecccccCCCCCCCccchHHHhhcceeEEEeecccc--
Q 028523           76 DLDAALKRYFPEGINIYFENVGG-KMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCLISKRIRMEGFLVPDY--  152 (208)
Q Consensus        76 ~~~~~~~~~~~~~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--  152 (208)
                      ++.+.+++..++++|++|||+|+ ..+..++++|+++|+++.+|...         ..+...++.+++++.++.....  
T Consensus       227 ~~~~~v~~~~~~g~Dvvid~~g~~~~~~~~~~~l~~~G~iv~~g~~~---------~~~~~~~~~k~~~i~~~~~~~~~~  297 (363)
T 4dvj_A          227 PLAAEVAALGLGAPAFVFSTTHTDKHAAEIADLIAPQGRFCLIDDPS---------AFDIMLFKRKAVSIHHELMFTRPM  297 (363)
T ss_dssp             CHHHHHHTTCSCCEEEEEECSCHHHHHHHHHHHSCTTCEEEECSCCS---------SCCGGGGTTTTCEEEECCTTHHHH
T ss_pred             CHHHHHHHhcCCCceEEEECCCchhhHHHHHHHhcCCCEEEEECCCC---------ccchHHHhhccceEEEEEeecccc
Confidence            68888888755599999999996 48899999999999999985422         2345566778888888665332  


Q ss_pred             -----ccchHHHHHHHHHHHHCCCceeeeeeee---cCCcHHHHHHHHhcCCccceEEEEec
Q 028523          153 -----FHLYPKFLEMMIPRIKEGKIVYVEDKAE---GLESAPAALVGLFSGRNVGKQVVEVA  206 (208)
Q Consensus       153 -----~~~~~~~~~~~~~~~~~g~~~~~~~~~~---~~~~~~~a~~~~~~~~~~gk~vv~~~  206 (208)
                           .....+.++++++++++|++++.+++++   +++++.+|++.+.+++..||+||++.
T Consensus       298 ~~~~~~~~~~~~~~~~~~l~~~g~l~~~i~~~~~~~~l~~~~~A~~~~~~~~~~GKvVl~~~  359 (363)
T 4dvj_A          298 FGTPDMSEQGRLLNDVSRLVDEGRLRTTLTNRLSPINAANLKQAHALVESGTARGKVVIEGF  359 (363)
T ss_dssp             HTCTTTHHHHHHHHHHHHHHHHTSSCCCEEEEECSCSHHHHHHHHHHHHHTCCCSEEEEECS
T ss_pred             ccCcchhhHHHHHHHHHHHHHCCCeeccccceecCCCHHHHHHHHHHHHhCCCceEEEEeCc
Confidence                 1122567899999999999999888766   89999999999999999999999985

>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1

Probab=99.97  E-value=5.3e-30  Score=200.18  Aligned_cols=194  Identities=19%  Similarity=0.232  Sum_probs=166.1

Q ss_pred             chhhHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHH
Q 028523            2 PGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGC-YVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAA   80 (208)
Q Consensus         2 ~~~tA~~~l~~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g~-~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~   80 (208)
                      +++|||+++.+.+++++|++|||+|+ |++|++++|+|+.+|+ +|+++++++++.+.++ ++|++.++++++. ++.+.
T Consensus       174 ~~~ta~~al~~~~~~~~g~~VlV~Ga-G~vG~~a~qlak~~Ga~~Vi~~~~~~~~~~~a~-~lGa~~vi~~~~~-~~~~~  250 (371)
T 1f8f_A          174 GIQTGAGACINALKVTPASSFVTWGA-GAVGLSALLAAKVCGASIIIAVDIVESRLELAK-QLGATHVINSKTQ-DPVAA  250 (371)
T ss_dssp             HHHHHHHHHHTTTCCCTTCEEEEESC-SHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHH-HHTCSEEEETTTS-CHHHH
T ss_pred             hHHHHHHHHHhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHH-HcCCCEEecCCcc-CHHHH
Confidence            56799999988889999999999995 9999999999999999 7999999999999998 9999999999887 88888


Q ss_pred             HHhHCCCCccEEEeCCCc-hhHHHHHHhhccCCEEEEEecccccCCCCCCCccchHHHhhcceeEEEeeccccccchHHH
Q 028523           81 LKRYFPEGINIYFENVGG-KMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCLISKRIRMEGFLVPDYFHLYPKF  159 (208)
Q Consensus        81 ~~~~~~~~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (208)
                      +++.+++++|++||++|+ ..+..++++|+++|+++.+|.....    .....+...++.+++++.++.....  ...+.
T Consensus       251 ~~~~~~gg~D~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~----~~~~~~~~~~~~~~~~i~g~~~~~~--~~~~~  324 (371)
T 1f8f_A          251 IKEITDGGVNFALESTGSPEILKQGVDALGILGKIAVVGAPQLG----TTAQFDVNDLLLGGKTILGVVEGSG--SPKKF  324 (371)
T ss_dssp             HHHHTTSCEEEEEECSCCHHHHHHHHHTEEEEEEEEECCCCSTT----CCCCCCHHHHHHTTCEEEECSGGGS--CHHHH
T ss_pred             HHHhcCCCCcEEEECCCCHHHHHHHHHHHhcCCEEEEeCCCCCC----CccccCHHHHHhCCCEEEEeCCCCC--chHHH
Confidence            988887789999999996 6889999999999999999876421    1223555667788999998876432  12467


Q ss_pred             HHHHHHHHHCCCcee--eeeeeecCCcHHHHHHHHhcCCccceEEEEec
Q 028523          160 LEMMIPRIKEGKIVY--VEDKAEGLESAPAALVGLFSGRNVGKQVVEVA  206 (208)
Q Consensus       160 ~~~~~~~~~~g~~~~--~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~~  206 (208)
                      ++++++++++|++++  .+++ |+++++++|++.+.+++. +|+||+++
T Consensus       325 ~~~~~~l~~~g~l~~~~~i~~-~~l~~~~~A~~~~~~~~~-~Kvvv~~~  371 (371)
T 1f8f_A          325 IPELVRLYQQGKFPFDQLVKF-YAFDEINQAAIDSRKGIT-LKPIIKIA  371 (371)
T ss_dssp             HHHHHHHHHTTSCCGGGGEEE-EEGGGHHHHHHHHHHTSC-SEEEEECC
T ss_pred             HHHHHHHHHcCCCCcccceeE-ecHHHHHHHHHHHHCCCc-eEEEEeeC
Confidence            899999999999986  4677 999999999999998876 79999874

>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1

Probab=99.97  E-value=7.8e-31  Score=205.36  Aligned_cols=190  Identities=21%  Similarity=0.256  Sum_probs=166.0

Q ss_pred             chhhHHHHHHHhcC-CCCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHhcCCCeeEecC---CCcc
Q 028523            2 PGMTAYAGFFEVCS-PKQGEYVFVSAASGAVGQLVGQFAKLVGC-YVVGSAGSKDKVDLLKNKFGFDEAFNYK---EEPD   76 (208)
Q Consensus         2 ~~~tA~~~l~~~~~-~~~g~~vli~ga~g~vG~~a~qla~~~g~-~v~~~~~s~~~~~~~~~~~g~~~v~~~~---~~~~   76 (208)
                      +++|||+++ +.++ +++|++|||+| +|++|++++|+|+.+|+ +|+++++++++.+.++ ++|++.+++++   +. +
T Consensus       179 ~~~ta~~al-~~~~~~~~g~~VlV~G-aG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~-~lGa~~vi~~~~~~~~-~  254 (380)
T 1vj0_A          179 SGATAYHAF-DEYPESFAGKTVVIQG-AGPLGLFGVVIARSLGAENVIVIAGSPNRLKLAE-EIGADLTLNRRETSVE-E  254 (380)
T ss_dssp             HHHHHHHHH-HTCSSCCBTCEEEEEC-CSHHHHHHHHHHHHTTBSEEEEEESCHHHHHHHH-HTTCSEEEETTTSCHH-H
T ss_pred             HHHHHHHHH-HhcCCCCCCCEEEEEC-cCHHHHHHHHHHHHcCCceEEEEcCCHHHHHHHH-HcCCcEEEeccccCcc-h
Confidence            467999999 5678 99999999999 79999999999999995 9999999999999999 99999999987   55 7


Q ss_pred             HHHHHHhHCCC-CccEEEeCCCc-hhHHHHHHhhccCCEEEEEeccc-ccCCCCCCCccchHH-HhhcceeEEEeecccc
Q 028523           77 LDAALKRYFPE-GINIYFENVGG-KMLDAVLLNMRIQGRITLCGMIS-QYNNDKPEGVHNLTC-LISKRIRMEGFLVPDY  152 (208)
Q Consensus        77 ~~~~~~~~~~~-~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~-~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~  152 (208)
                      +.+.+++.+++ ++|++||++|+ ..+..++++|+++|+++.+|... +     ....++... ++.+++++.|+.... 
T Consensus       255 ~~~~v~~~~~g~g~Dvvid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~-----~~~~~~~~~~~~~~~~~i~g~~~~~-  328 (380)
T 1vj0_A          255 RRKAIMDITHGRGADFILEATGDSRALLEGSELLRRGGFYSVAGVAVPQ-----DPVPFKVYEWLVLKNATFKGIWVSD-  328 (380)
T ss_dssp             HHHHHHHHTTTSCEEEEEECSSCTTHHHHHHHHEEEEEEEEECCCCSCC-----CCEEECHHHHTTTTTCEEEECCCCC-
T ss_pred             HHHHHHHHhCCCCCcEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCCC-----CCeeEchHHHHHhCCeEEEEeecCC-
Confidence            88888888887 89999999996 68999999999999999998754 2     122344555 778899999987654 


Q ss_pred             ccchHHHHHHHHHHHHC--CCceeeeeeeecCCcHHHHHHHHhcCCccceEEEEec
Q 028523          153 FHLYPKFLEMMIPRIKE--GKIVYVEDKAEGLESAPAALVGLFSGRNVGKQVVEVA  206 (208)
Q Consensus       153 ~~~~~~~~~~~~~~~~~--g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~~  206 (208)
                          .+.++++++++++  |++++.++++|+++++++|++.+.+++.. |+||+++
T Consensus       329 ----~~~~~~~~~l~~~~~g~l~~~i~~~~~l~~~~~A~~~~~~~~~~-Kvvl~~~  379 (380)
T 1vj0_A          329 ----TSHFVKTVSITSRNYQLLSKLITHRLPLKEANKALELMESREAL-KVILYPE  379 (380)
T ss_dssp             ----HHHHHHHHHHHHTCHHHHGGGCCEEEEGGGHHHHHHHHHHTSCS-CEEEECC
T ss_pred             ----HHHHHHHHHHHHhhcCCeeeEEEEEEeHHHHHHHHHHHhcCCCc-eEEEEeC
Confidence                6678999999999  99988888999999999999999998877 9999875

>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A

Probab=99.97  E-value=3.5e-30  Score=198.89  Aligned_cols=189  Identities=23%  Similarity=0.317  Sum_probs=164.7

Q ss_pred             chhhHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHHH
Q 028523            2 PGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAAL   81 (208)
Q Consensus         2 ~~~tA~~~l~~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~~   81 (208)
                      +++|||+++.+. ++++|++|||+|+ |++|++++|+++..|++|+++++++++.+.++ ++|++.++|+++. ++.+.+
T Consensus       149 ~~~ta~~~l~~~-~~~~g~~VlV~Ga-G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~-~lGa~~~~d~~~~-~~~~~~  224 (339)
T 1rjw_A          149 AGVTTYKALKVT-GAKPGEWVAIYGI-GGLGHVAVQYAKAMGLNVVAVDIGDEKLELAK-ELGADLVVNPLKE-DAAKFM  224 (339)
T ss_dssp             HHHHHHHHHHHH-TCCTTCEEEEECC-STTHHHHHHHHHHTTCEEEEECSCHHHHHHHH-HTTCSEEECTTTS-CHHHHH
T ss_pred             hHHHHHHHHHhc-CCCCCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-HCCCCEEecCCCc-cHHHHH
Confidence            467999999664 8999999999998 88999999999999999999999999999998 8999999999876 888888


Q ss_pred             HhHCCCCccEEEeCCCc-hhHHHHHHhhccCCEEEEEecccccCCCCCCCccchHHHhhcceeEEEeeccccccchHHHH
Q 028523           82 KRYFPEGINIYFENVGG-KMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCLISKRIRMEGFLVPDYFHLYPKFL  160 (208)
Q Consensus        82 ~~~~~~~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (208)
                      ++.+ +++|++||++|. ..+..++++|+++|+++.+|...+      ....+...++.+++++.|+....     .+.+
T Consensus       225 ~~~~-~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~------~~~~~~~~~~~~~~~i~g~~~~~-----~~~~  292 (339)
T 1rjw_A          225 KEKV-GGVHAAVVTAVSKPAFQSAYNSIRRGGACVLVGLPPE------EMPIPIFDTVLNGIKIIGSIVGT-----RKDL  292 (339)
T ss_dssp             HHHH-SSEEEEEESSCCHHHHHHHHHHEEEEEEEEECCCCSS------EEEEEHHHHHHTTCEEEECCSCC-----HHHH
T ss_pred             HHHh-CCCCEEEECCCCHHHHHHHHHHhhcCCEEEEecccCC------CCccCHHHHHhCCcEEEEeccCC-----HHHH
Confidence            7776 579999999996 789999999999999999987542      12345566778899999876544     5678


Q ss_pred             HHHHHHHHCCCceeeeeeeecCCcHHHHHHHHhcCCccceEEEEecC
Q 028523          161 EMMIPRIKEGKIVYVEDKAEGLESAPAALVGLFSGRNVGKQVVEVAT  207 (208)
Q Consensus       161 ~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~~~  207 (208)
                      +++++++++|.+++.+ ++|+++++++|++.+.+++..||+||++++
T Consensus       293 ~~~~~l~~~g~l~~~~-~~~~l~~~~~A~~~~~~~~~~gKvvi~~~~  338 (339)
T 1rjw_A          293 QEALQFAAEGKVKTII-EVQPLEKINEVFDRMLKGQINGRVVLTLED  338 (339)
T ss_dssp             HHHHHHHHTTSCCCCE-EEEEGGGHHHHHHHHHTTCCSSEEEEECCC
T ss_pred             HHHHHHHHcCCCCccE-EEEcHHHHHHHHHHHHcCCCceEEEEecCC
Confidence            9999999999998864 689999999999999998888999999875

>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A

Probab=99.97  E-value=7.3e-31  Score=204.02  Aligned_cols=196  Identities=20%  Similarity=0.302  Sum_probs=159.5

Q ss_pred             chhhHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHH----HHHHHHHhcCCCeeEecCCCccH
Q 028523            2 PGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKD----KVDLLKNKFGFDEAFNYKEEPDL   77 (208)
Q Consensus         2 ~~~tA~~~l~~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~----~~~~~~~~~g~~~v~~~~~~~~~   77 (208)
                      +++|||+++.+.+++++|++|||+|++|++|++++|+||.+|+++++++++.+    +.+.++ ++|++.++++++.  .
T Consensus       151 ~~~ta~~~l~~~~~~~~g~~VlV~Ga~G~vG~~aiqlak~~Ga~vi~~~~~~~~~~~~~~~~~-~lGa~~vi~~~~~--~  227 (357)
T 1zsy_A          151 NPCTAYRMLMDFEQLQPGDSVIQNASNSGVGQAVIQIAAALGLRTINVVRDRPDIQKLSDRLK-SLGAEHVITEEEL--R  227 (357)
T ss_dssp             HHHHHHHHHHHSSCCCTTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEECCCSCHHHHHHHHH-HTTCSEEEEHHHH--H
T ss_pred             cHHHHHHHHHHHhccCCCCEEEEeCCcCHHHHHHHHHHHHcCCEEEEEecCccchHHHHHHHH-hcCCcEEEecCcc--h
Confidence            46899999988889999999999999999999999999999999888886533    467788 9999999987531  1


Q ss_pred             HHHHHhHCCC--CccEEEeCCCchhHHHHHHhhccCCEEEEEecccccCCCCCCCccchHHHhhcceeEEEeecccc---
Q 028523           78 DAALKRYFPE--GINIYFENVGGKMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCLISKRIRMEGFLVPDY---  152 (208)
Q Consensus        78 ~~~~~~~~~~--~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---  152 (208)
                      .+.+.+.+.+  ++|++|||+|++....++++++++|+++.+|...+     .....+...++.+++++.+++...+   
T Consensus       228 ~~~~~~~~~~~~~~Dvvid~~g~~~~~~~~~~l~~~G~iv~~G~~~~-----~~~~~~~~~~~~~~~~i~g~~~~~~~~~  302 (357)
T 1zsy_A          228 RPEMKNFFKDMPQPRLALNCVGGKSSTELLRQLARGGTMVTYGGMAK-----QPVVASVSLLIFKDLKLRGFWLSQWKKD  302 (357)
T ss_dssp             SGGGGGTTSSSCCCSEEEESSCHHHHHHHHTTSCTTCEEEECCCCTT-----CCBCCCHHHHHHSCCEEEECCHHHHHHH
T ss_pred             HHHHHHHHhCCCCceEEEECCCcHHHHHHHHhhCCCCEEEEEecCCC-----CCCCCCHHHHHhcCceEEEEEcchhccc
Confidence            2344555544  59999999998777789999999999999986442     1223455567779999999876543   


Q ss_pred             --ccchHHHHHHHHHHHHCCCceeeeeeeecCCcHHHHHHHHhcCCccceEEEEe
Q 028523          153 --FHLYPKFLEMMIPRIKEGKIVYVEDKAEGLESAPAALVGLFSGRNVGKQVVEV  205 (208)
Q Consensus       153 --~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~  205 (208)
                        +....+.++++++++++|++++.+.++|+++++.+|++.+.+++..||+||++
T Consensus       303 ~~~~~~~~~~~~~~~l~~~g~l~~~~~~~~~l~~~~~A~~~~~~~~~~gKvvl~~  357 (357)
T 1zsy_A          303 HSPDQFKELILTLCDLIRRGQLTAPACSQVPLQDYQSALEASMKPFISSKQILTM  357 (357)
T ss_dssp             SCHHHHHHHHHHHHHHHHTTSSCCCCEEEEEGGGHHHHHHHHTSSSCSSEEEEEC
T ss_pred             CCHHHHHHHHHHHHHHHHcCCCcCccceEEcHHHHHHHHHHHHhCCCCCcEEEeC
Confidence              22235678999999999999998888999999999999999988889999975

>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}

Probab=99.97  E-value=1.3e-30  Score=199.86  Aligned_cols=184  Identities=28%  Similarity=0.305  Sum_probs=155.8

Q ss_pred             chhhHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeEecCCCcc-HHHH
Q 028523            2 PGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPD-LDAA   80 (208)
Q Consensus         2 ~~~tA~~~l~~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~-~~~~   80 (208)
                      +++|||+++ +.+++++|++|||+||+|++|++++|+|+..|++|++++ ++++.+.++ ++|++.++|+++. + +.+.
T Consensus       137 ~~~ta~~al-~~~~~~~g~~vlV~Ga~G~vG~~a~q~a~~~Ga~vi~~~-~~~~~~~~~-~lGa~~~i~~~~~-~~~~~~  212 (321)
T 3tqh_A          137 AGLTALQAL-NQAEVKQGDVVLIHAGAGGVGHLAIQLAKQKGTTVITTA-SKRNHAFLK-ALGAEQCINYHEE-DFLLAI  212 (321)
T ss_dssp             HHHHHHHHH-HHTTCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEE-CHHHHHHHH-HHTCSEEEETTTS-CHHHHC
T ss_pred             HHHHHHHHH-HhcCCCCCCEEEEEcCCcHHHHHHHHHHHHcCCEEEEEe-ccchHHHHH-HcCCCEEEeCCCc-chhhhh
Confidence            357999999 779999999999999999999999999999999999998 667788888 9999999999887 5 5443


Q ss_pred             HHhHCCCCccEEEeCCCchhHHHHHHhhccCCEEEEEecccccCCCCCCCccchHHHhhcceeEEEeeccccccchHHHH
Q 028523           81 LKRYFPEGINIYFENVGGKMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCLISKRIRMEGFLVPDYFHLYPKFL  160 (208)
Q Consensus        81 ~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (208)
                      +     .++|++|||+|++.+..++++|+++|+++.+|....        .........+++++.++....    ..+.+
T Consensus       213 ~-----~g~D~v~d~~g~~~~~~~~~~l~~~G~iv~~g~~~~--------~~~~~~~~~~~~~~~~~~~~~----~~~~~  275 (321)
T 3tqh_A          213 S-----TPVDAVIDLVGGDVGIQSIDCLKETGCIVSVPTITA--------GRVIEVAKQKHRRAFGLLKQF----NIEEL  275 (321)
T ss_dssp             C-----SCEEEEEESSCHHHHHHHGGGEEEEEEEEECCSTTH--------HHHHHHHHHTTCEEECCCCCC----CHHHH
T ss_pred             c-----cCCCEEEECCCcHHHHHHHHhccCCCEEEEeCCCCc--------hhhhhhhhhcceEEEEEecCC----CHHHH
Confidence            3     379999999998878999999999999999876431        111223556788887754321    25679


Q ss_pred             HHHHHHHHCCCceeeeeeeecCCcHHHHHHHHhcCCccceEEEEec
Q 028523          161 EMMIPRIKEGKIVYVEDKAEGLESAPAALVGLFSGRNVGKQVVEVA  206 (208)
Q Consensus       161 ~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~~  206 (208)
                      +++++++++|.+++.++++|+++++++|++.+.+++..||+||+++
T Consensus       276 ~~~~~l~~~g~l~~~i~~~~~l~~~~~A~~~~~~~~~~gKvvl~~~  321 (321)
T 3tqh_A          276 HYLGKLVSEDKLRIEISRIFQLSEAVTAHELLETGHVRGKLVFKVR  321 (321)
T ss_dssp             HHHHHHHHTTSSCCCEEEEECGGGHHHHHHHHHTTCCCSEEEEECC
T ss_pred             HHHHHHHHCCCcccccccEEcHHHHHHHHHHHHcCCCCceEEEEeC
Confidence            9999999999999999999999999999999999999999999874

>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*

Probab=99.97  E-value=3.7e-30  Score=199.35  Aligned_cols=190  Identities=22%  Similarity=0.292  Sum_probs=166.3

Q ss_pred             chhhHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHH
Q 028523            2 PGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLV-GCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAA   80 (208)
Q Consensus         2 ~~~tA~~~l~~~~~~~~g~~vli~ga~g~vG~~a~qla~~~-g~~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~   80 (208)
                      +++|||+++.+ +++++|++|||+|++|++|++++|+++.. |++|+++++++++.+.++ ++|++.++++.+. ++.+.
T Consensus       155 ~~~ta~~~l~~-~~~~~g~~vlV~Gagg~iG~~~~~~a~~~~Ga~Vi~~~~~~~~~~~~~-~~g~~~~~~~~~~-~~~~~  231 (347)
T 1jvb_A          155 SGITTYRAVRK-ASLDPTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAK-RAGADYVINASMQ-DPLAE  231 (347)
T ss_dssp             HHHHHHHHHHH-TTCCTTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHHH-HHTCSEEEETTTS-CHHHH
T ss_pred             hHHHHHHHHHh-cCCCCCCEEEEECCCccHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHH-HhCCCEEecCCCc-cHHHH
Confidence            46789999954 89999999999999889999999999999 999999999999999998 8999999999886 78788


Q ss_pred             HHhHCC-CCccEEEeCCCch-hHHHHHHhhccCCEEEEEecccccCCCCCCCccchHHHhhcceeEEEeeccccccchHH
Q 028523           81 LKRYFP-EGINIYFENVGGK-MLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCLISKRIRMEGFLVPDYFHLYPK  158 (208)
Q Consensus        81 ~~~~~~-~~~d~v~d~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  158 (208)
                      +.+.+. +++|++||++|++ .+..++++|+++|+++.+|....    .+  ..+...++.+++++.++....     .+
T Consensus       232 ~~~~~~~~~~d~vi~~~g~~~~~~~~~~~l~~~G~iv~~g~~~~----~~--~~~~~~~~~~~~~i~g~~~~~-----~~  300 (347)
T 1jvb_A          232 IRRITESKGVDAVIDLNNSEKTLSVYPKALAKQGKYVMVGLFGA----DL--HYHAPLITLSEIQFVGSLVGN-----QS  300 (347)
T ss_dssp             HHHHTTTSCEEEEEESCCCHHHHTTGGGGEEEEEEEEECCSSCC----CC--CCCHHHHHHHTCEEEECCSCC-----HH
T ss_pred             HHHHhcCCCceEEEECCCCHHHHHHHHHHHhcCCEEEEECCCCC----CC--CCCHHHHHhCceEEEEEeccC-----HH
Confidence            888876 5899999999975 88999999999999999987541    11  345566778899999877644     56


Q ss_pred             HHHHHHHHHHCCCceeeeeeeecCCcHHHHHHHHhcCCccceEEEEe
Q 028523          159 FLEMMIPRIKEGKIVYVEDKAEGLESAPAALVGLFSGRNVGKQVVEV  205 (208)
Q Consensus       159 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~  205 (208)
                      .++++++++++|.+++.++++|+++++++|++.+++++..||+||++
T Consensus       301 ~~~~~~~l~~~g~l~~~i~~~~~l~~~~~A~~~~~~~~~~gKvvl~~  347 (347)
T 1jvb_A          301 DFLGIMRLAEAGKVKPMITKTMKLEEANEAIDNLENFKAIGRQVLIP  347 (347)
T ss_dssp             HHHHHHHHHHTTSSCCCCEEEEEGGGHHHHHHHHHTTCCCSEEEEEC
T ss_pred             HHHHHHHHHHcCCCCceEEEEEcHHHHHHHHHHHHCCCCcceEEecC
Confidence            78999999999999999989999999999999999998889999974

>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*

Probab=99.97  E-value=1.9e-30  Score=202.50  Aligned_cols=203  Identities=15%  Similarity=0.156  Sum_probs=162.8

Q ss_pred             chhhHHHHHHHh-cCC-----------CCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeE
Q 028523            2 PGMTAYAGFFEV-CSP-----------KQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAF   69 (208)
Q Consensus         2 ~~~tA~~~l~~~-~~~-----------~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~v~   69 (208)
                      +++|||+++.+. .++           ++|++|||+|++|++|++++|+|+..|++|++++ ++++.+.++ ++|++.++
T Consensus       136 ~~~ta~~~l~~~~~~~~~~~~~~~~~~~~g~~VlV~Ga~G~vG~~a~qla~~~Ga~Vi~~~-~~~~~~~~~-~lGa~~vi  213 (371)
T 3gqv_A          136 GISTAGLAMKLLGLPLPSPSADQPPTHSKPVYVLVYGGSTATATVTMQMLRLSGYIPIATC-SPHNFDLAK-SRGAEEVF  213 (371)
T ss_dssp             HHHHHHHHHHHHTCCCCCSSCSSCCCCSSCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEE-CGGGHHHHH-HTTCSEEE
T ss_pred             hHHHHHHHHHhhccCCCCCccccccccCCCcEEEEECCCcHHHHHHHHHHHHCCCEEEEEe-CHHHHHHHH-HcCCcEEE
Confidence            467999999887 553           8999999999999999999999999999999997 889999999 99999999


Q ss_pred             ecCCCccHHHHHHhHCCCCccEEEeCCCc-hhHHHHHHhh-ccCCEEEEEecccccCCCCCC---CccchHHHhhcceeE
Q 028523           70 NYKEEPDLDAALKRYFPEGINIYFENVGG-KMLDAVLLNM-RIQGRITLCGMISQYNNDKPE---GVHNLTCLISKRIRM  144 (208)
Q Consensus        70 ~~~~~~~~~~~~~~~~~~~~d~v~d~~g~-~~~~~~~~~l-~~~G~~v~~g~~~~~~~~~~~---~~~~~~~~~~~~~~~  144 (208)
                      |+++. ++.+.+++.+++++|++|||+|+ ..+..++++| +++|+++.+|...........   .......++.+++++
T Consensus       214 ~~~~~-~~~~~v~~~t~g~~d~v~d~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~k~~~~  292 (371)
T 3gqv_A          214 DYRAP-NLAQTIRTYTKNNLRYALDCITNVESTTFCFAAIGRAGGHYVSLNPFPEHAATRKMVTTDWTLGPTIFGEGSTW  292 (371)
T ss_dssp             ETTST-THHHHHHHHTTTCCCEEEESSCSHHHHHHHHHHSCTTCEEEEESSCCCC---CCSCEEEEECCGGGGGTSCBSC
T ss_pred             ECCCc-hHHHHHHHHccCCccEEEECCCchHHHHHHHHHhhcCCCEEEEEecCccccccccccceeeeeeeeeccccccc
Confidence            99987 89999999998889999999997 6799999999 589999999865431100011   111234567788888


Q ss_pred             EEeecccc----ccchHHHHHHHHHHHHCCCceeeee--eeecCCcHHHHHHHHhcCCccc-eEEEEecC
Q 028523          145 EGFLVPDY----FHLYPKFLEMMIPRIKEGKIVYVED--KAEGLESAPAALVGLFSGRNVG-KQVVEVAT  207 (208)
Q Consensus       145 ~~~~~~~~----~~~~~~~~~~~~~~~~~g~~~~~~~--~~~~~~~~~~a~~~~~~~~~~g-k~vv~~~~  207 (208)
                      .|+.....    .+...++++++++++++|++++.+.  +.|+++++++|++.+.+++..| |+|+++++
T Consensus       293 ~g~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~~~~~~~~l~~~~~A~~~l~~g~~~Gkkvvv~~~~  362 (371)
T 3gqv_A          293 PAPYGRPGSEEERQFGEDLWRIAGQLVEDGRLVHHPLRVVQGGFDHIKQGMELVRKGELSGEKLVVRLEG  362 (371)
T ss_dssp             STTTCBCCCHHHHHHHHHHHHHHHHHHHTTSSCCCCEEEEEECHHHHHHHHHHHHTTCCSSCEEEEEECC
T ss_pred             cccccccccHHHHHHHHHHHHHHHHHHHCCeeeCCcCeecCCcHHHHHHHHHHHHcCCCceEEEEEEeCC
Confidence            87754432    1233456778999999999998754  4589999999999999998777 67777654

>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}

Probab=99.97  E-value=1.4e-30  Score=201.57  Aligned_cols=185  Identities=22%  Similarity=0.196  Sum_probs=142.7

Q ss_pred             chhhHHHHHHHh----cCCCCCCEEEEecCCchHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHhcCCCeeEecCC-C
Q 028523            2 PGMTAYAGFFEV----CSPKQGEYVFVSAASGAVGQLVGQFAKLV--GCYVVGSAGSKDKVDLLKNKFGFDEAFNYKE-E   74 (208)
Q Consensus         2 ~~~tA~~~l~~~----~~~~~g~~vli~ga~g~vG~~a~qla~~~--g~~v~~~~~s~~~~~~~~~~~g~~~v~~~~~-~   74 (208)
                      +++|||+++...    +++ +|++|||+|+ |++|++++|+|+.+  |++|+++++++++.+.++ ++|++.++++++ .
T Consensus       151 ~~~ta~~al~~~~~~~~~~-~g~~VlV~Ga-G~vG~~aiqlak~~~~Ga~Vi~~~~~~~~~~~~~-~lGa~~vi~~~~~~  227 (344)
T 2h6e_A          151 AGTTSMGAIRQALPFISKF-AEPVVIVNGI-GGLAVYTIQILKALMKNITIVGISRSKKHRDFAL-ELGADYVSEMKDAE  227 (344)
T ss_dssp             HHHHHHHHHHHHHHHHTTC-SSCEEEEECC-SHHHHHHHHHHHHHCTTCEEEEECSCHHHHHHHH-HHTCSEEECHHHHH
T ss_pred             hhHHHHHHHHhhhhcccCC-CCCEEEEECC-CHHHHHHHHHHHHhcCCCEEEEEeCCHHHHHHHH-HhCCCEEeccccch
Confidence            467999999765    288 9999999998 99999999999999  999999999999999999 899999998764 3


Q ss_pred             ccHHHHHHhHCCC-CccEEEeCCCch-hHHHHHHhhccCCEEEEEecccccCCCCCCCccchHHHhhcceeEEEeecccc
Q 028523           75 PDLDAALKRYFPE-GINIYFENVGGK-MLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCLISKRIRMEGFLVPDY  152 (208)
Q Consensus        75 ~~~~~~~~~~~~~-~~d~v~d~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  152 (208)
                       ++   +.+.+.+ ++|++||++|++ .+..++++|+++|+++.+|...+      ....+...++.+++++.++.... 
T Consensus       228 -~~---~~~~~~g~g~D~vid~~g~~~~~~~~~~~l~~~G~iv~~g~~~~------~~~~~~~~~~~~~~~i~g~~~~~-  296 (344)
T 2h6e_A          228 -SL---INKLTDGLGASIAIDLVGTEETTYNLGKLLAQEGAIILVGMEGK------RVSLEAFDTAVWNKKLLGSNYGS-  296 (344)
T ss_dssp             -HH---HHHHHTTCCEEEEEESSCCHHHHHHHHHHEEEEEEEEECCCCSS------CCCCCHHHHHHTTCEEEECCSCC-
T ss_pred             -HH---HHHhhcCCCccEEEECCCChHHHHHHHHHhhcCCEEEEeCCCCC------CcccCHHHHhhCCcEEEEEecCC-
Confidence             33   3444445 899999999975 89999999999999999987542      12345566778999999877543 


Q ss_pred             ccchHHHHHHHHHHHHCCCceeeeeeeecCCcHHHHHHHHhcCCccceEEEEe
Q 028523          153 FHLYPKFLEMMIPRIKEGKIVYVEDKAEGLESAPAALVGLFSGRNVGKQVVEV  205 (208)
Q Consensus       153 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~  205 (208)
                          .+.++++++++++|++++.+ ++|+++++++|++.+++++..||+||++
T Consensus       297 ----~~~~~~~~~l~~~g~i~~~i-~~~~l~~~~~A~~~~~~~~~~gKvvl~~  344 (344)
T 2h6e_A          297 ----LNDLEDVVRLSESGKIKPYI-IKVPLDDINKAFTNLDEGRVDGRQVITP  344 (344)
T ss_dssp             ----HHHHHHHHHHHHTTSSCCCE-EEECC----------------CEEEECC
T ss_pred             ----HHHHHHHHHHHHcCCCCcce-EEEeHHHHHHHHHHHHcCCCceEEEEeC
Confidence                56789999999999999988 9999999999999999988889999864

>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}

Probab=99.97  E-value=3.5e-31  Score=205.25  Aligned_cols=194  Identities=20%  Similarity=0.269  Sum_probs=163.1

Q ss_pred             chhhHHHHHHHhcCCCCC-CEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHH
Q 028523            2 PGMTAYAGFFEVCSPKQG-EYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAA   80 (208)
Q Consensus         2 ~~~tA~~~l~~~~~~~~g-~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~   80 (208)
                      +++|||+++ +.++ ++| ++++|+||+|++|++++|+|+..|++|+++++++++.+.++ ++|++.++|+++. ++.+.
T Consensus       149 ~~~ta~~~~-~~~~-~~g~~~vli~gg~g~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~-~~Ga~~~~~~~~~-~~~~~  224 (349)
T 3pi7_A          149 NPLTAIAMF-DIVK-QEGEKAFVMTAGASQLCKLIIGLAKEEGFRPIVTVRRDEQIALLK-DIGAAHVLNEKAP-DFEAT  224 (349)
T ss_dssp             HHHHHHHHH-HHHH-HHCCSEEEESSTTSHHHHHHHHHHHHHTCEEEEEESCGGGHHHHH-HHTCSEEEETTST-THHHH
T ss_pred             cHHHHHHHH-HHHh-hCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HcCCCEEEECCcH-HHHHH
Confidence            357899766 4455 666 79999999999999999999999999999999999999999 9999999999887 89999


Q ss_pred             HHhHCCC-CccEEEeCCCchhHHHHHHhhccCCEEEEEecccccCCCCCCCccch-HHHhhcceeEEEeecccc----cc
Q 028523           81 LKRYFPE-GINIYFENVGGKMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNL-TCLISKRIRMEGFLVPDY----FH  154 (208)
Q Consensus        81 ~~~~~~~-~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~----~~  154 (208)
                      +++.+++ ++|++|||+|++.+..++++|+++|+++.+|...+.     ....+. ..++.+++++.++....+    +.
T Consensus       225 v~~~~~~~g~D~vid~~g~~~~~~~~~~l~~~G~iv~~G~~~~~-----~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~  299 (349)
T 3pi7_A          225 LREVMKAEQPRIFLDAVTGPLASAIFNAMPKRARWIIYGRLDPD-----ATVIREPGQLIFQHKHIEGFWLSEWMRQFKE  299 (349)
T ss_dssp             HHHHHHHHCCCEEEESSCHHHHHHHHHHSCTTCEEEECCCSCCS-----CCCCSCTHHHHHSCCEEEECCHHHHHHHTHH
T ss_pred             HHHHhcCCCCcEEEECCCChhHHHHHhhhcCCCEEEEEeccCCC-----CCCCCchhhhhccccEEEEEEehhhhhhCcH
Confidence            9998876 899999999998889999999999999999975531     223444 677889999999887654    22


Q ss_pred             chHHHHHHHHHHHHCCCceeeeeeeecCCcHHHHHHHHhcCCccceEEEEe
Q 028523          155 LYPKFLEMMIPRIKEGKIVYVEDKAEGLESAPAALVGLFSGRNVGKQVVEV  205 (208)
Q Consensus       155 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~  205 (208)
                      ...+.++++++++++|++++.++++|+++++.+|++.+. +...||+||++
T Consensus       300 ~~~~~~~~~~~l~~~g~l~~~i~~~~~l~~~~~A~~~~~-~~~~gKvvl~p  349 (349)
T 3pi7_A          300 RRGPAILEAQKRFSDGRWSTDVTAVVPLAEAIAWVPAEL-TKPNGKVFIRP  349 (349)
T ss_dssp             HHHHHHHHC-CTTTTSSCCC-CCEEEEHHHHHHHHHHHH-TSSSSCEEEEC
T ss_pred             HHHHHHHHHHHHHHcCCcccccceEEcHHHHHHHHHHHh-CCCCceEEEeC
Confidence            345678899999999999999999999999999999554 45679999975

>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A

Probab=99.97  E-value=3.6e-30  Score=200.05  Aligned_cols=190  Identities=17%  Similarity=0.166  Sum_probs=161.3

Q ss_pred             chhhHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHhcCCCeeEecC---CCccH
Q 028523            2 PGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGC-YVVGSAGSKDKVDLLKNKFGFDEAFNYK---EEPDL   77 (208)
Q Consensus         2 ~~~tA~~~l~~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g~-~v~~~~~s~~~~~~~~~~~g~~~v~~~~---~~~~~   77 (208)
                      +++|||+++ +.+++++|++|||+|+ |++|++++|+|+.+|+ +|+++++++++.+.++ ++|++.+++++   +. ++
T Consensus       156 ~~~ta~~al-~~~~~~~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~-~lGa~~vi~~~~~~~~-~~  231 (356)
T 1pl8_A          156 PLSVGIHAC-RRGGVTLGHKVLVCGA-GPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAK-EIGADLVLQISKESPQ-EI  231 (356)
T ss_dssp             HHHHHHHHH-HHHTCCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHH-HTTCSEEEECSSCCHH-HH
T ss_pred             hHHHHHHHH-HhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHH-HhCCCEEEcCcccccc-hH
Confidence            467999999 6789999999999996 9999999999999999 9999999999999999 99999999987   23 67


Q ss_pred             HHHHHhHCCCCccEEEeCCCc-hhHHHHHHhhccCCEEEEEecccccCCCCCCCccchHHHhhcceeEEEeeccccccch
Q 028523           78 DAALKRYFPEGINIYFENVGG-KMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCLISKRIRMEGFLVPDYFHLY  156 (208)
Q Consensus        78 ~~~~~~~~~~~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  156 (208)
                      .+.+++.+++++|++||++|+ ..+..++++|+++|+++.+|...      .....+...++.+++++.++...      
T Consensus       232 ~~~i~~~~~~g~D~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~------~~~~~~~~~~~~~~~~i~g~~~~------  299 (356)
T 1pl8_A          232 ARKVEGQLGCKPEVTIECTGAEASIQAGIYATRSGGTLVLVGLGS------EMTTVPLLHAAIREVDIKGVFRY------  299 (356)
T ss_dssp             HHHHHHHHTSCCSEEEECSCCHHHHHHHHHHSCTTCEEEECSCCC------SCCCCCHHHHHHTTCEEEECCSC------
T ss_pred             HHHHHHHhCCCCCEEEECCCChHHHHHHHHHhcCCCEEEEEecCC------CCCccCHHHHHhcceEEEEeccc------
Confidence            777777765689999999996 47899999999999999998743      12234556778899999887643      


Q ss_pred             HHHHHHHHHHHHCCCce--eeeeeeecCCcHHHHHHHHhcCCccceEEEEecCC
Q 028523          157 PKFLEMMIPRIKEGKIV--YVEDKAEGLESAPAALVGLFSGRNVGKQVVEVATE  208 (208)
Q Consensus       157 ~~~~~~~~~~~~~g~~~--~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~~~~  208 (208)
                      .+.++++++++++|+++  +.++++|+++++.+|++.+.++ ..+|+||+++++
T Consensus       300 ~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~-~~gKvvi~~~~~  352 (356)
T 1pl8_A          300 CNTWPVAISMLASKSVNVKPLVTHRFPLEKALEAFETFKKG-LGLKIMLKCDPS  352 (356)
T ss_dssp             SSCHHHHHHHHHTTSCCCGGGEEEEEEGGGHHHHHHHHHTT-CCSEEEEECCTT
T ss_pred             HHHHHHHHHHHHcCCCChHHheEEEecHHHHHHHHHHHhCC-CceEEEEeCCCC
Confidence            23478899999999875  5677899999999999999988 789999998653

>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*

Probab=99.97  E-value=1e-30  Score=203.94  Aligned_cols=192  Identities=17%  Similarity=0.233  Sum_probs=164.5

Q ss_pred             chhhHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHH
Q 028523            2 PGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGC-YVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAA   80 (208)
Q Consensus         2 ~~~tA~~~l~~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g~-~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~   80 (208)
                      +++|||+++ +.+++++|++|||+|+ |++|++++|+|+.+|+ +|+++++++++.+.++ ++|++.++|+++. ++.+.
T Consensus       167 ~~~ta~~~l-~~~~~~~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~-~lGa~~vi~~~~~-~~~~~  242 (370)
T 4ej6_A          167 PLACCLHGV-DLSGIKAGSTVAILGG-GVIGLLTVQLARLAGATTVILSTRQATKRRLAE-EVGATATVDPSAG-DVVEA  242 (370)
T ss_dssp             HHHHHHHHH-HHHTCCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHH-HHTCSEEECTTSS-CHHHH
T ss_pred             HHHHHHHHH-HhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHH-HcCCCEEECCCCc-CHHHH
Confidence            467999999 7789999999999997 9999999999999999 9999999999999999 9999999999887 88888


Q ss_pred             HHh---HCCCCccEEEeCCC-chhHHHHHHhhccCCEEEEEecccccCCCCCCCccchHHHhhcceeEEEeeccccccch
Q 028523           81 LKR---YFPEGINIYFENVG-GKMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCLISKRIRMEGFLVPDYFHLY  156 (208)
Q Consensus        81 ~~~---~~~~~~d~v~d~~g-~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  156 (208)
                      +++   .+++++|+||||+| .+.+..++++|+++|+++.+|...+.    .....+...++.+++++.|+....     
T Consensus       243 i~~~~~~~~gg~Dvvid~~G~~~~~~~~~~~l~~~G~vv~~G~~~~~----~~~~~~~~~~~~~~~~i~g~~~~~-----  313 (370)
T 4ej6_A          243 IAGPVGLVPGGVDVVIECAGVAETVKQSTRLAKAGGTVVILGVLPQG----EKVEIEPFDILFRELRVLGSFINP-----  313 (370)
T ss_dssp             HHSTTSSSTTCEEEEEECSCCHHHHHHHHHHEEEEEEEEECSCCCTT----CCCCCCHHHHHHTTCEEEECCSCT-----
T ss_pred             HHhhhhccCCCCCEEEECCCCHHHHHHHHHHhccCCEEEEEeccCCC----CccccCHHHHHhCCcEEEEeccCh-----
Confidence            888   66669999999999 57899999999999999999876531    233456778889999999987643     


Q ss_pred             HHHHHHHHHHHHCCCce--eeeeeeecCCcHHHHHHHHhcCC-ccceEEEEecC
Q 028523          157 PKFLEMMIPRIKEGKIV--YVEDKAEGLESAPAALVGLFSGR-NVGKQVVEVAT  207 (208)
Q Consensus       157 ~~~~~~~~~~~~~g~~~--~~~~~~~~~~~~~~a~~~~~~~~-~~gk~vv~~~~  207 (208)
                       ..++++++++++|+++  +.++++|+|+++.+|++.+.+++ ..+|+++++++
T Consensus       314 -~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~~~~kvv~~~~~  366 (370)
T 4ej6_A          314 -FVHRRAADLVATGAIEIDRMISRRISLDEAPDVISNPAAAGEVKVLVIPSAER  366 (370)
T ss_dssp             -TCHHHHHHHHHTTCSCCGGGEEEEECGGGHHHHHHSCCCTTCSEEEECCC---
T ss_pred             -HHHHHHHHHHHcCCCChhHcEEEEEEHHHHHHHHHHHHcCCCCeEEEEEcccc
Confidence             2378899999999995  45789999999999999998877 56799888754

>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}

Probab=99.97  E-value=1.3e-30  Score=203.07  Aligned_cols=190  Identities=16%  Similarity=0.163  Sum_probs=160.5

Q ss_pred             chhhHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCE-EEEEeCCHHHHHHHHHhcCCCeeEecC----CCcc
Q 028523            2 PGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCY-VVGSAGSKDKVDLLKNKFGFDEAFNYK----EEPD   76 (208)
Q Consensus         2 ~~~tA~~~l~~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g~~-v~~~~~s~~~~~~~~~~~g~~~v~~~~----~~~~   76 (208)
                      +++|||+++ +.+++++|++|||+|+ |++|++++|+||.+|++ |+++++++++.++++ ++ ++.++++.    +.++
T Consensus       164 ~~~ta~~~l-~~~~~~~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~-~l-~~~~~~~~~~~~~~~~  239 (363)
T 3m6i_A          164 PLSVALAGL-QRAGVRLGDPVLICGA-GPIGLITMLCAKAAGACPLVITDIDEGRLKFAK-EI-CPEVVTHKVERLSAEE  239 (363)
T ss_dssp             HHHHHHHHH-HHHTCCTTCCEEEECC-SHHHHHHHHHHHHTTCCSEEEEESCHHHHHHHH-HH-CTTCEEEECCSCCHHH
T ss_pred             HHHHHHHHH-HHcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHH-Hh-chhcccccccccchHH
Confidence            467999999 7789999999999997 99999999999999996 999999999999999 88 76666654    1226


Q ss_pred             HHHHHHhHCCC-CccEEEeCCCch-hHHHHHHhhccCCEEEEEecccccCCCCCCCccchHHHhhcceeEEEeecccccc
Q 028523           77 LDAALKRYFPE-GINIYFENVGGK-MLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCLISKRIRMEGFLVPDYFH  154 (208)
Q Consensus        77 ~~~~~~~~~~~-~~d~v~d~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  154 (208)
                      +.+.+++.+++ ++|++||++|++ .+..++++|+++|+++.+|...+      ....+...++.+++++.++...    
T Consensus       240 ~~~~v~~~t~g~g~Dvvid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~------~~~~~~~~~~~~~~~i~g~~~~----  309 (363)
T 3m6i_A          240 SAKKIVESFGGIEPAVALECTGVESSIAAAIWAVKFGGKVFVIGVGKN------EIQIPFMRASVREVDLQFQYRY----  309 (363)
T ss_dssp             HHHHHHHHTSSCCCSEEEECSCCHHHHHHHHHHSCTTCEEEECCCCCS------CCCCCHHHHHHHTCEEEECCSC----
T ss_pred             HHHHHHHHhCCCCCCEEEECCCChHHHHHHHHHhcCCCEEEEEccCCC------CccccHHHHHhcCcEEEEccCC----
Confidence            78888888877 999999999975 78999999999999999987542      2235566788899999887643    


Q ss_pred             chHHHHHHHHHHHHCCCc--eeeeeeeecCCcHHHHHHHHhcC-CccceEEEEecC
Q 028523          155 LYPKFLEMMIPRIKEGKI--VYVEDKAEGLESAPAALVGLFSG-RNVGKQVVEVAT  207 (208)
Q Consensus       155 ~~~~~~~~~~~~~~~g~~--~~~~~~~~~~~~~~~a~~~~~~~-~~~gk~vv~~~~  207 (208)
                        .+.++++++++++|++  ++.++++|+++++++|++.+.++ ...+|+||++++
T Consensus       310 --~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~~~~Kvvi~~~~  363 (363)
T 3m6i_A          310 --CNTWPRAIRLVENGLVDLTRLVTHRFPLEDALKAFETASDPKTGAIKVQIQSLE  363 (363)
T ss_dssp             --SSCHHHHHHHHHTTSSCCGGGEEEEEEGGGHHHHHHHHHCGGGCCSEEEEECC-
T ss_pred             --HHHHHHHHHHHHhCCCChHHceeeeeeHHHHHHHHHHHhccCCCeEEEEEecCC
Confidence              3457889999999998  45678899999999999999998 577899999864

>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D

Probab=99.97  E-value=1.1e-30  Score=198.81  Aligned_cols=189  Identities=25%  Similarity=0.299  Sum_probs=157.5

Q ss_pred             chhhHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeEecCC-CccHHHH
Q 028523            2 PGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKE-EPDLDAA   80 (208)
Q Consensus         2 ~~~tA~~~l~~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~v~~~~~-~~~~~~~   80 (208)
                      +++|||+++.+.+ +++|++|||+|++|++|++++|+++..|++|+++++++++.+.++ ++|++.++++++ . ++.+.
T Consensus       110 ~~~ta~~~l~~~~-~~~g~~vlV~Ga~G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~-~~ga~~~~~~~~~~-~~~~~  186 (302)
T 1iz0_A          110 SFLTAYLALKRAQ-ARPGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLALPL-ALGAEEAATYAEVP-ERAKA  186 (302)
T ss_dssp             HHHHHHHHHHHTT-CCTTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGGGSHHHH-HTTCSEEEEGGGHH-HHHHH
T ss_pred             HHHHHHHHHHHhc-CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-hcCCCEEEECCcch-hHHHH
Confidence            5789999998778 999999999999999999999999999999999999999999998 899999998875 4 55444


Q ss_pred             HHhHCCCCccEEEeCCCchhHHHHHHhhccCCEEEEEecccccCCCCCCCccchHHHhhcceeEEEeeccccccchHHHH
Q 028523           81 LKRYFPEGINIYFENVGGKMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCLISKRIRMEGFLVPDYFHLYPKFL  160 (208)
Q Consensus        81 ~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (208)
                      +     +++|++|| +|++.+..++++|+++|+++.+|...+.     ....+...++.+++++.++....+ ....+.+
T Consensus       187 ~-----~~~d~vid-~g~~~~~~~~~~l~~~G~~v~~g~~~~~-----~~~~~~~~~~~~~~~~~g~~~~~~-~~~~~~~  254 (302)
T 1iz0_A          187 W-----GGLDLVLE-VRGKEVEESLGLLAHGGRLVYIGAAEGE-----VAPIPPLRLMRRNLAVLGFWLTPL-LREGALV  254 (302)
T ss_dssp             T-----TSEEEEEE-CSCTTHHHHHTTEEEEEEEEEC------------CCCCTTHHHHTTCEEEECCHHHH-TTCHHHH
T ss_pred             h-----cCceEEEE-CCHHHHHHHHHhhccCCEEEEEeCCCCC-----CCCcCHHHHHhCCCeEEEEeccch-hhhHHHH
Confidence            3     47999999 9988999999999999999999876531     112344567789999998876432 2235678


Q ss_pred             HHHHH---HHHCCCceeeeeeeecCCcHHHHHHHHhcCCccceEEEEe
Q 028523          161 EMMIP---RIKEGKIVYVEDKAEGLESAPAALVGLFSGRNVGKQVVEV  205 (208)
Q Consensus       161 ~~~~~---~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~  205 (208)
                      +++++   ++.+|++++.++++|+++++++|++.+.+++..||+|+++
T Consensus       255 ~~~~~~~~l~~~g~l~~~i~~~~~l~~~~~A~~~~~~~~~~gKvvv~~  302 (302)
T 1iz0_A          255 EEALGFLLPRLGRELRPVVGPVFPFAEAEAAFRALLDRGHTGKVVVRL  302 (302)
T ss_dssp             HHHHHHHGGGBTTTBCCCEEEEEEGGGHHHHHHHTTCTTCCBEEEEEC
T ss_pred             HHHHhhhHHHHcCCcccccceEEcHHHHHHHHHHHHcCCCCceEEEeC
Confidence            88999   9999999999999999999999999999988889999974

>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}

Probab=99.97  E-value=3e-30  Score=199.87  Aligned_cols=196  Identities=18%  Similarity=0.139  Sum_probs=163.0

Q ss_pred             hhHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHHHH
Q 028523            4 MTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGC-YVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALK   82 (208)
Q Consensus         4 ~tA~~~l~~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g~-~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~   82 (208)
                      +|++..+....++++|++|+|+|+ |++|++++|+|+++|+ .++++++++++++.++ ++|+++++|+++. +..+.++
T Consensus       146 ~~~~~~~~~~~~~~~g~~VlV~Ga-G~vG~~aiq~ak~~G~~~vi~~~~~~~k~~~a~-~lGa~~~i~~~~~-~~~~~~~  222 (346)
T 4a2c_A          146 ITVGLHAFHLAQGCENKNVIIIGA-GTIGLLAIQCAVALGAKSVTAIDISSEKLALAK-SFGAMQTFNSSEM-SAPQMQS  222 (346)
T ss_dssp             HHHHHHHHHHTTCCTTSEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHH-HTTCSEEEETTTS-CHHHHHH
T ss_pred             HHHHHHHHHHhccCCCCEEEEECC-CCcchHHHHHHHHcCCcEEEEEechHHHHHHHH-HcCCeEEEeCCCC-CHHHHHH
Confidence            344455557789999999999996 9999999999999999 5678888999999999 9999999999987 8888888


Q ss_pred             hHCCC-CccEEEeCCC-chhHHHHHHhhccCCEEEEEecccccCCCCCCCccchHHHhhcceeEEEeeccccccchHHHH
Q 028523           83 RYFPE-GINIYFENVG-GKMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCLISKRIRMEGFLVPDYFHLYPKFL  160 (208)
Q Consensus        83 ~~~~~-~~d~v~d~~g-~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (208)
                      ..+++ ++|+++|++| ...++.++++++++|+++.+|...+.   ......+...++.+++++.|++.........+.+
T Consensus       223 ~~~~~~g~d~v~d~~G~~~~~~~~~~~l~~~G~~v~~g~~~~~---~~~~~~~~~~~~~k~~~i~G~~~~~~~~~~~~~~  299 (346)
T 4a2c_A          223 VLRELRFNQLILETAGVPQTVELAVEIAGPHAQLALVGTLHQD---LHLTSATFGKILRKELTVIGSWMNYSSPWPGQEW  299 (346)
T ss_dssp             HHGGGCSSEEEEECSCSHHHHHHHHHHCCTTCEEEECCCCSSC---EEECHHHHHHHHHHTCEEEECCTTCCSSTTCHHH
T ss_pred             hhcccCCcccccccccccchhhhhhheecCCeEEEEEeccCCC---ccccccCHHHHhhceeEEEEEeccccCcchHHHH
Confidence            88877 8999999999 46889999999999999999986531   1112234456778999999987654433335678


Q ss_pred             HHHHHHHHCCCce--eeeeeeecCCcHHHHHHHHhcCCccceEEEEe
Q 028523          161 EMMIPRIKEGKIV--YVEDKAEGLESAPAALVGLFSGRNVGKQVVEV  205 (208)
Q Consensus       161 ~~~~~~~~~g~~~--~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~  205 (208)
                      +++++++++|+++  |.++++|+|+++++|++.+++++..||+||.+
T Consensus       300 ~~~~~l~~~g~l~~~~lI~~~~~l~~~~~A~~~l~~~~~~GKvVl~P  346 (346)
T 4a2c_A          300 ETASRLLTERKLSLEPLIAHRGSFESFAQAVRDIARNAMPGKVLLIP  346 (346)
T ss_dssp             HHHHHHHHTTCSCCGGGEEEEECHHHHHHHHHHHTTSCCCSEEEECC
T ss_pred             HHHHHHHHcCCCCCCccEeEEEeHHHHHHHHHHHHcCCCceEEEEEC
Confidence            9999999999885  45789999999999999999999999999964

>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A

Probab=99.97  E-value=3.7e-30  Score=199.74  Aligned_cols=193  Identities=17%  Similarity=0.140  Sum_probs=161.9

Q ss_pred             chhhHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHH
Q 028523            2 PGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGC-YVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAA   80 (208)
Q Consensus         2 ~~~tA~~~l~~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g~-~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~   80 (208)
                      +++|||+++ +.+++++|++|||+|+ |++|++++|+|+.+|+ +|+++++++++.+.++ ++|++.++++++. ++.+.
T Consensus       151 ~~~ta~~al-~~~~~~~g~~VlV~Ga-G~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~-~lGa~~vi~~~~~-~~~~~  226 (352)
T 3fpc_A          151 MMTTGFHGA-ELANIKLGDTVCVIGI-GPVGLMSVAGANHLGAGRIFAVGSRKHCCDIAL-EYGATDIINYKNG-DIVEQ  226 (352)
T ss_dssp             HHHHHHHHH-HHTTCCTTCCEEEECC-SHHHHHHHHHHHTTTCSSEEEECCCHHHHHHHH-HHTCCEEECGGGS-CHHHH
T ss_pred             hhHHHHHHH-HhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHH-HhCCceEEcCCCc-CHHHH
Confidence            467999999 7789999999999995 9999999999999999 8999999999999999 9999999999887 89999


Q ss_pred             HHhHCCC-CccEEEeCCCc-hhHHHHHHhhccCCEEEEEecccccCCCCCCCccc--hHHHhhcceeEEEeeccccccch
Q 028523           81 LKRYFPE-GINIYFENVGG-KMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHN--LTCLISKRIRMEGFLVPDYFHLY  156 (208)
Q Consensus        81 ~~~~~~~-~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~  156 (208)
                      +++.+++ ++|++||++|+ +.+..++++|+++|+++.+|...+.    .....+  ......+++++.++....    .
T Consensus       227 v~~~t~g~g~D~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~~~~~----~~~~~~~~~~~~~~~~~~i~g~~~~~----~  298 (352)
T 3fpc_A          227 ILKATDGKGVDKVVIAGGDVHTFAQAVKMIKPGSDIGNVNYLGEG----DNIDIPRSEWGVGMGHKHIHGGLCPG----G  298 (352)
T ss_dssp             HHHHTTTCCEEEEEECSSCTTHHHHHHHHEEEEEEEEECCCCCSC----SEEEEETTTTGGGTBCEEEEEBCCCC----H
T ss_pred             HHHHcCCCCCCEEEECCCChHHHHHHHHHHhcCCEEEEecccCCC----CceecchhHhhhhccccEEEEeeccC----c
Confidence            9999988 89999999997 6899999999999999999976421    111111  122234677777765422    1


Q ss_pred             HHHHHHHHHHHHCCCceee--eeeeec-CCcHHHHHHHHhcCCc-cceEEEEec
Q 028523          157 PKFLEMMIPRIKEGKIVYV--EDKAEG-LESAPAALVGLFSGRN-VGKQVVEVA  206 (208)
Q Consensus       157 ~~~~~~~~~~~~~g~~~~~--~~~~~~-~~~~~~a~~~~~~~~~-~gk~vv~~~  206 (208)
                      .+.++++++++++|++++.  ++++|+ ++++++|++.+.+++. .+|+||+++
T Consensus       299 ~~~~~~~~~l~~~g~i~~~~~i~~~~~gl~~~~~A~~~~~~~~~~~~Kvvi~~~  352 (352)
T 3fpc_A          299 RLRMERLIDLVFYKRVDPSKLVTHVFRGFDNIEKAFMLMKDKPKDLIKPVVILA  352 (352)
T ss_dssp             HHHHHHHHHHHHTTSCCGGGGEEEEEESTTHHHHHHHHHHSCCTTCSEEEEECC
T ss_pred             hhHHHHHHHHHHcCCCChhHhheeeCCCHHHHHHHHHHHHhCCCCcEEEEEEeC
Confidence            5568999999999999874  778999 9999999999998764 489999874

>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*

Probab=99.97  E-value=9.5e-30  Score=199.06  Aligned_cols=192  Identities=16%  Similarity=0.183  Sum_probs=161.7

Q ss_pred             chhhHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHhcCCCeeEecCC-CccHHH
Q 028523            2 PGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGC-YVVGSAGSKDKVDLLKNKFGFDEAFNYKE-EPDLDA   79 (208)
Q Consensus         2 ~~~tA~~~l~~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g~-~v~~~~~s~~~~~~~~~~~g~~~v~~~~~-~~~~~~   79 (208)
                      +++|||+++.+.+++++|++|||+|+ |++|++++|+|+.+|+ +|+++++++++.+.++ ++|++.++|+++ .+++.+
T Consensus       179 ~~~ta~~~l~~~~~~~~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~-~lGa~~vi~~~~~~~~~~~  256 (376)
T 1e3i_A          179 GFSSGYGAAINTAKVTPGSTCAVFGL-GCVGLSAIIGCKIAGASRIIAIDINGEKFPKAK-ALGATDCLNPRELDKPVQD  256 (376)
T ss_dssp             HHHHHHHHHHTTSCCCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHH-HTTCSEEECGGGCSSCHHH
T ss_pred             HHHHHHHHHHHhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHH-HhCCcEEEccccccchHHH
Confidence            46799999988899999999999995 9999999999999999 8999999999999998 999999999875 127888


Q ss_pred             HHHhHCCCCccEEEeCCCc-hhHHHHHHhhccC-CEEEEEecccccCCCCCCCccchHHHhhcceeEEEeeccccccchH
Q 028523           80 ALKRYFPEGINIYFENVGG-KMLDAVLLNMRIQ-GRITLCGMISQYNNDKPEGVHNLTCLISKRIRMEGFLVPDYFHLYP  157 (208)
Q Consensus        80 ~~~~~~~~~~d~v~d~~g~-~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  157 (208)
                      .+++.+++++|+|||++|+ +.+..++++++++ |+++.+|...      .....+...++.++ ++.++....+.  ..
T Consensus       257 ~v~~~~~~g~Dvvid~~G~~~~~~~~~~~l~~~~G~iv~~G~~~------~~~~~~~~~~~~~~-~i~g~~~~~~~--~~  327 (376)
T 1e3i_A          257 VITELTAGGVDYSLDCAGTAQTLKAAVDCTVLGWGSCTVVGAKV------DEMTIPTVDVILGR-SINGTFFGGWK--SV  327 (376)
T ss_dssp             HHHHHHTSCBSEEEESSCCHHHHHHHHHTBCTTTCEEEECCCSS------SEEEEEHHHHHTTC-EEEECSGGGCC--HH
T ss_pred             HHHHHhCCCccEEEECCCCHHHHHHHHHHhhcCCCEEEEECCCC------CccccCHHHhhccC-eEEEEecCCCC--cH
Confidence            8888877789999999996 7889999999999 9999998732      12234455566677 88887654321  25


Q ss_pred             HHHHHHHHHHHCCCce--eeeeeeecCCcHHHHHHHHhcCCccceEEEEe
Q 028523          158 KFLEMMIPRIKEGKIV--YVEDKAEGLESAPAALVGLFSGRNVGKQVVEV  205 (208)
Q Consensus       158 ~~~~~~~~~~~~g~~~--~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~  205 (208)
                      +.++++++++++|+++  +.++++|+|+++++|++.+.+++. +|+||++
T Consensus       328 ~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~-~Kvvi~~  376 (376)
T 1e3i_A          328 DSVPNLVSDYKNKKFDLDLLVTHALPFESINDAIDLMKEGKS-IRTILTF  376 (376)
T ss_dssp             HHHHHHHHHHHTTSSCGGGGEEEEEEGGGHHHHHHHHHTTCC-SEEEEEC
T ss_pred             HHHHHHHHHHHcCCCCcHHhEeeeecHHHHHHHHHHHhcCCc-ceEEEeC
Confidence            6789999999999987  457889999999999999998874 7999875

>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1

Probab=99.97  E-value=6.6e-30  Score=198.31  Aligned_cols=190  Identities=18%  Similarity=0.190  Sum_probs=161.5

Q ss_pred             chhhHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeEecCC-CccHHHH
Q 028523            2 PGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKE-EPDLDAA   80 (208)
Q Consensus         2 ~~~tA~~~l~~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~v~~~~~-~~~~~~~   80 (208)
                      +++|||+++ +.+++++|++|||+|+ |++|++++|+|+.+|++|+++++++++.+.++ ++|++.++++++ . ++.+.
T Consensus       153 ~~~ta~~al-~~~~~~~g~~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~-~lGa~~~~~~~~~~-~~~~~  228 (352)
T 1e3j_A          153 PLSVGVHAC-RRAGVQLGTTVLVIGA-GPIGLVSVLAAKAYGAFVVCTARSPRRLEVAK-NCGADVTLVVDPAK-EEESS  228 (352)
T ss_dssp             HHHHHHHHH-HHHTCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-HTTCSEEEECCTTT-SCHHH
T ss_pred             hHHHHHHHH-HhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHH-HhCCCEEEcCcccc-cHHHH
Confidence            467999999 6789999999999996 99999999999999999999999999999999 999999999885 5 66777


Q ss_pred             HHhHCC----CCccEEEeCCCch-hHHHHHHhhccCCEEEEEecccccCCCCCCCccchHHHhhcceeEEEeeccccccc
Q 028523           81 LKRYFP----EGINIYFENVGGK-MLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCLISKRIRMEGFLVPDYFHL  155 (208)
Q Consensus        81 ~~~~~~----~~~d~v~d~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  155 (208)
                      +++.++    +++|++||++|+. .+..++++|+++|+++.+|....      ....+...++.+++++.++...     
T Consensus       229 i~~~~~~~~g~g~D~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~------~~~~~~~~~~~~~~~i~g~~~~-----  297 (352)
T 1e3j_A          229 IIERIRSAIGDLPNVTIDCSGNEKCITIGINITRTGGTLMLVGMGSQ------MVTVPLVNACAREIDIKSVFRY-----  297 (352)
T ss_dssp             HHHHHHHHSSSCCSEEEECSCCHHHHHHHHHHSCTTCEEEECSCCSS------CCCCCHHHHHTTTCEEEECCSC-----
T ss_pred             HHHHhccccCCCCCEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCC------CccccHHHHHhcCcEEEEeccc-----
Confidence            777665    3899999999964 78999999999999999987431      1234556778889999887642     


Q ss_pred             hHHHHHHHHHHHHCCCce--eeeeeeecCCcHHHHHHHHhcCC-ccceEEEEecC
Q 028523          156 YPKFLEMMIPRIKEGKIV--YVEDKAEGLESAPAALVGLFSGR-NVGKQVVEVAT  207 (208)
Q Consensus       156 ~~~~~~~~~~~~~~g~~~--~~~~~~~~~~~~~~a~~~~~~~~-~~gk~vv~~~~  207 (208)
                       .+.++++++++++|+++  +.++++|+++++++|++.+.+++ ..+|+||++++
T Consensus       298 -~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~~~~Kvvi~~~~  351 (352)
T 1e3j_A          298 -CNDYPIALEMVASGRCNVKQLVTHSFKLEQTVDAFEAARKKADNTIKVMISCRQ  351 (352)
T ss_dssp             -SSCHHHHHHHHHTTSCCCGGGEEEEEEGGGHHHHHHHHHHCCTTCSEEEEECCC
T ss_pred             -hHHHHHHHHHHHcCCCChHHheeEEecHHHHHHHHHHHhcCCCCceEEEEecCC
Confidence             23478899999999865  56778999999999999999988 68999999875

>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa}

Probab=99.97  E-value=4.6e-31  Score=222.48  Aligned_cols=195  Identities=19%  Similarity=0.241  Sum_probs=167.0

Q ss_pred             chhhHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHHH
Q 028523            2 PGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAAL   81 (208)
Q Consensus         2 ~~~tA~~~l~~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~~   81 (208)
                      +++|||+++.+.+++++|++|||+||+|++|++++|+||++|++|+++++++ +.+.+  ++|+++++++++. ++.+.+
T Consensus       329 ~~~Ta~~al~~~a~l~~G~~VLI~gaaGgvG~~aiqlAk~~Ga~V~~t~~~~-k~~~l--~lga~~v~~~~~~-~~~~~i  404 (795)
T 3slk_A          329 VFLTAYYALVDLAGLRPGESLLVHSAAGGVGMAAIQLARHLGAEVYATASED-KWQAV--ELSREHLASSRTC-DFEQQF  404 (795)
T ss_dssp             HHHHHHCCCCCCTCCCTTCCEEEESTTBHHHHHHHHHHHHTTCCEEEECCGG-GGGGS--CSCGGGEECSSSS-THHHHH
T ss_pred             HHHHHHHHHHHHhCCCCCCEEEEecCCCHHHHHHHHHHHHcCCEEEEEeChH-Hhhhh--hcChhheeecCCh-hHHHHH
Confidence            4789999998989999999999999999999999999999999999999554 55554  3899999999887 999999


Q ss_pred             HhHCCC-CccEEEeCCCchhHHHHHHhhccCCEEEEEecccccCCCCCCCccchHHHhhcceeEEEeecccc-ccchHHH
Q 028523           82 KRYFPE-GINIYFENVGGKMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCLISKRIRMEGFLVPDY-FHLYPKF  159 (208)
Q Consensus        82 ~~~~~~-~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~  159 (208)
                      ++.+++ |+|+|||+++++.+..++++|+++|+++.+|.....      .. .......+++++.++++... +....+.
T Consensus       405 ~~~t~g~GvDvVld~~gg~~~~~~l~~l~~~Gr~v~iG~~~~~------~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~  477 (795)
T 3slk_A          405 LGATGGRGVDVVLNSLAGEFADASLRMLPRGGRFLELGKTDVR------DP-VEVADAHPGVSYQAFDTVEAGPQRIGEM  477 (795)
T ss_dssp             HHHSCSSCCSEEEECCCTTTTHHHHTSCTTCEEEEECCSTTCC------CH-HHHHHHSSSEEEEECCGGGGHHHHHHHH
T ss_pred             HHHcCCCCeEEEEECCCcHHHHHHHHHhcCCCEEEEecccccc------Cc-ccccccCCCCEEEEeeccccCHHHHHHH
Confidence            999988 999999999999999999999999999999875421      11 11122347788887776433 4555778


Q ss_pred             HHHHHHHHHCCCceeeeeeeecCCcHHHHHHHHhcCCccceEEEEecC
Q 028523          160 LEMMIPRIKEGKIVYVEDKAEGLESAPAALVGLFSGRNVGKQVVEVAT  207 (208)
Q Consensus       160 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~~~  207 (208)
                      ++++++++++|.+++.+.++|+++++.+|++.+.+++..||+||++++
T Consensus       478 l~~~~~l~~~g~l~p~~~~~~~l~~~~eA~~~l~~g~~~GKvVl~~~~  525 (795)
T 3slk_A          478 LHELVELFEGRVLEPLPVTAWDVRQAPEALRHLSQARHVGKLVLTMPP  525 (795)
T ss_dssp             HHHHHHHHHTTSCCCCCEEEEEGGGHHHHHHHHHHTCCCBEEEEECCC
T ss_pred             HHHHHHHHHcCCcCCCcceeEcHHHHHHHHHHHhcCCccceEEEecCc
Confidence            999999999999999999999999999999999999999999999753

>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*

Probab=99.97  E-value=1.2e-29  Score=198.24  Aligned_cols=193  Identities=18%  Similarity=0.188  Sum_probs=161.0

Q ss_pred             chhhHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHhcCCCeeEecCC-CccHHH
Q 028523            2 PGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGC-YVVGSAGSKDKVDLLKNKFGFDEAFNYKE-EPDLDA   79 (208)
Q Consensus         2 ~~~tA~~~l~~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g~-~v~~~~~s~~~~~~~~~~~g~~~v~~~~~-~~~~~~   79 (208)
                      +++|||+++.+.+++++|++|||+|+ |++|++++|+|+.+|+ +|+++++++++.+.++ ++|+++++++++ .+++.+
T Consensus       175 ~~~ta~~~l~~~~~~~~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~-~lGa~~vi~~~~~~~~~~~  252 (373)
T 1p0f_A          175 GFATGYGAAVNTAKVTPGSTCAVFGL-GGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAI-ELGATECLNPKDYDKPIYE  252 (373)
T ss_dssp             HHHHHHHHHHTTTCCCTTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHH-HTTCSEEECGGGCSSCHHH
T ss_pred             HHHHHHHHHHhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHH-HcCCcEEEecccccchHHH
Confidence            46899999988899999999999995 9999999999999999 8999999999999999 999999999875 127888


Q ss_pred             HHHhHCCCCccEEEeCCCc-hhHHHHHHhhccC-CEEEEEecccccCCCCCCCccchHHHhhcceeEEEeeccccccchH
Q 028523           80 ALKRYFPEGINIYFENVGG-KMLDAVLLNMRIQ-GRITLCGMISQYNNDKPEGVHNLTCLISKRIRMEGFLVPDYFHLYP  157 (208)
Q Consensus        80 ~~~~~~~~~~d~v~d~~g~-~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  157 (208)
                      .+++.+++++|+|||++|+ +.+..++++|+++ |+++.+|....    ......+...++.++ ++.|+....+.   .
T Consensus       253 ~i~~~t~gg~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~----~~~~~~~~~~~~~~~-~i~g~~~~~~~---~  324 (373)
T 1p0f_A          253 VICEKTNGGVDYAVECAGRIETMMNALQSTYCGSGVTVVLGLASP----NERLPLDPLLLLTGR-SLKGSVFGGFK---G  324 (373)
T ss_dssp             HHHHHTTSCBSEEEECSCCHHHHHHHHHTBCTTTCEEEECCCCCT----TCCEEECTHHHHTTC-EEEECSGGGCC---G
T ss_pred             HHHHHhCCCCCEEEECCCCHHHHHHHHHHHhcCCCEEEEEccCCC----CCccccCHHHhccCc-eEEeeccCCcC---H
Confidence            8988887799999999996 7899999999999 99999987542    111233444555667 88887654321   2


Q ss_pred             HHHHHHHHHHHCCCce--eeeeeeecCCcHHHHHHHHhcCCccceEEEEe
Q 028523          158 KFLEMMIPRIKEGKIV--YVEDKAEGLESAPAALVGLFSGRNVGKQVVEV  205 (208)
Q Consensus       158 ~~~~~~~~~~~~g~~~--~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~  205 (208)
                      +.++++++++++|.++  +.++++|+++++.+|++.+++++. +|+||++
T Consensus       325 ~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~-~kvvi~~  373 (373)
T 1p0f_A          325 EEVSRLVDDYMKKKINVNFLVSTKLTLDQINKAFELLSSGQG-VRSIMIY  373 (373)
T ss_dssp             GGHHHHHHHHHTTSSCGGGGEEEEECGGGHHHHHHHTTTSSC-SEEEEEC
T ss_pred             HHHHHHHHHHHcCCCCchheEEEEeeHHHHHHHHHHHHCCCc-ceEEEeC
Confidence            4588899999999987  457889999999999999988775 7999875

>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1

Probab=99.97  E-value=1.3e-29  Score=199.58  Aligned_cols=196  Identities=19%  Similarity=0.232  Sum_probs=161.3

Q ss_pred             chhhHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHH
Q 028523            2 PGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGC-YVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAA   80 (208)
Q Consensus         2 ~~~tA~~~l~~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g~-~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~   80 (208)
                      +++|||+++. .+++++|++|||+|+ |++|++++|+||.+|+ +|+++++++++.+.++ ++|++ ++++++.+++.+.
T Consensus       170 ~~~ta~~al~-~~~~~~g~~VlV~Ga-G~vG~~aiqlAk~~Ga~~Vi~~~~~~~~~~~a~-~lGa~-~i~~~~~~~~~~~  245 (398)
T 1kol_A          170 ILPTGYHGAV-TAGVGPGSTVYVAGA-GPVGLAAAASARLLGAAVVIVGDLNPARLAHAK-AQGFE-IADLSLDTPLHEQ  245 (398)
T ss_dssp             HHHHHHHHHH-HTTCCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHH-HTTCE-EEETTSSSCHHHH
T ss_pred             HHHHHHHHHH-HcCCCCCCEEEEECC-cHHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHH-HcCCc-EEccCCcchHHHH
Confidence            4679999995 689999999999995 9999999999999999 7999999999999999 99996 8888765248888


Q ss_pred             HHhHCCC-CccEEEeCCCch----------------hHHHHHHhhccCCEEEEEeccc-ccCCC------CCCCccchHH
Q 028523           81 LKRYFPE-GINIYFENVGGK----------------MLDAVLLNMRIQGRITLCGMIS-QYNND------KPEGVHNLTC  136 (208)
Q Consensus        81 ~~~~~~~-~~d~v~d~~g~~----------------~~~~~~~~l~~~G~~v~~g~~~-~~~~~------~~~~~~~~~~  136 (208)
                      +++.+++ ++|+|||++|++                .+..++++|+++|+++.+|... +....      ......+...
T Consensus       246 v~~~t~g~g~Dvvid~~G~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~  325 (398)
T 1kol_A          246 IAALLGEPEVDCAVDAVGFEARGHGHEGAKHEAPATVLNSLMQVTRVAGKIGIPGLYVTEDPGAVDAAAKIGSLSIRFGL  325 (398)
T ss_dssp             HHHHHSSSCEEEEEECCCTTCBCSSTTGGGSBCTTHHHHHHHHHEEEEEEEEECSCCCSCCTTCSSHHHHTTCCCCCHHH
T ss_pred             HHHHhCCCCCCEEEECCCCcccccccccccccchHHHHHHHHHHHhcCCEEEEeccccCCcccccccccccccccccHHH
Confidence            8888876 899999999964                6889999999999999998752 11100      0112344556


Q ss_pred             HhhcceeEEEeeccccccchHHHHHHHHHHHHCCCce---eeeeeeecCCcHHHHHHHHhcCCccceEEEEecC
Q 028523          137 LISKRIRMEGFLVPDYFHLYPKFLEMMIPRIKEGKIV---YVEDKAEGLESAPAALVGLFSGRNVGKQVVEVAT  207 (208)
Q Consensus       137 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~---~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~~~  207 (208)
                      ++.+++++.+....     ..+.++++++++.+|.++   +.++++|+++++++|++.+.+++. +|+||+++.
T Consensus       326 ~~~~~~~~~g~~~~-----~~~~~~~~~~l~~~g~l~~~~~~i~~~~~l~~~~~A~~~~~~~~~-gKvvi~~~~  393 (398)
T 1kol_A          326 GWAKSHSFHTGQTP-----VMKYNRALMQAIMWDRINIAEVVGVQVISLDDAPRGYGEFDAGVP-KKFVIDPHK  393 (398)
T ss_dssp             HHHTTCEEEESSCC-----HHHHHHHHHHHHHTTSCCHHHHHTEEEECGGGHHHHHHHHHHTCS-CEEEECTTC
T ss_pred             HhhcccEEEecccC-----hHHHHHHHHHHHHcCCCCCccceeEEEEcHHHHHHHHHHHhCCCc-eEEEEEeCC
Confidence            77788888875432     256688899999999998   457889999999999999999887 999998754

>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*

Probab=99.97  E-value=1e-29  Score=196.90  Aligned_cols=189  Identities=22%  Similarity=0.237  Sum_probs=162.3

Q ss_pred             chhhHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHH
Q 028523            2 PGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGC-YVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAA   80 (208)
Q Consensus         2 ~~~tA~~~l~~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g~-~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~   80 (208)
                      +++|||+++ +.+++ +|++|||+|+ |++|++++|+++..|+ +|+++++++++.+.++ ++|++.++++++. ++.+.
T Consensus       153 ~~~ta~~~l-~~~~~-~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~-~~Ga~~~~~~~~~-~~~~~  227 (348)
T 2d8a_A          153 PLGNAVDTV-LAGPI-SGKSVLITGA-GPLGLLGIAVAKASGAYPVIVSEPSDFRRELAK-KVGADYVINPFEE-DVVKE  227 (348)
T ss_dssp             HHHHHHHHH-TTSCC-TTCCEEEECC-SHHHHHHHHHHHHTTCCSEEEECSCHHHHHHHH-HHTCSEEECTTTS-CHHHH
T ss_pred             HHHHHHHHH-HhcCC-CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHH-HhCCCEEECCCCc-CHHHH
Confidence            457999999 67889 9999999998 9999999999999999 9999999999999999 9999999999877 88889


Q ss_pred             HHhHCCC-CccEEEeCCCc-hhHHHHHHhhccCCEEEEEecccccCCCCCCCccch-HHHhhcceeEEEeeccccccchH
Q 028523           81 LKRYFPE-GINIYFENVGG-KMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNL-TCLISKRIRMEGFLVPDYFHLYP  157 (208)
Q Consensus        81 ~~~~~~~-~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~  157 (208)
                      +++.+++ ++|++||++|. +.+..++++|+++|+++.+|...+      ....+. ..++.+++++.|+....    ..
T Consensus       228 v~~~~~g~g~D~vid~~g~~~~~~~~~~~l~~~G~iv~~g~~~~------~~~~~~~~~~~~~~~~i~g~~~~~----~~  297 (348)
T 2d8a_A          228 VMDITDGNGVDVFLEFSGAPKALEQGLQAVTPAGRVSLLGLYPG------KVTIDFNNLIIFKALTIYGITGRH----LW  297 (348)
T ss_dssp             HHHHTTTSCEEEEEECSCCHHHHHHHHHHEEEEEEEEECCCCSS------CCCCCHHHHTTTTTCEEEECCCCC----SH
T ss_pred             HHHHcCCCCCCEEEECCCCHHHHHHHHHHHhcCCEEEEEccCCC------CcccCchHHHHhCCcEEEEecCCC----cH
Confidence            9988877 89999999996 788999999999999999987542      123445 56678899998876432    15


Q ss_pred             HHHHHHHHHHHCCCc--eeeeeeeec-CCcHHHHHHHHhcCCccceEEEEec
Q 028523          158 KFLEMMIPRIKEGKI--VYVEDKAEG-LESAPAALVGLFSGRNVGKQVVEVA  206 (208)
Q Consensus       158 ~~~~~~~~~~~~g~~--~~~~~~~~~-~~~~~~a~~~~~~~~~~gk~vv~~~  206 (208)
                      +.++++++++++|++  ++.++++|+ ++++++|++.+++ ...+|+||+++
T Consensus       298 ~~~~~~~~l~~~g~i~~~~~i~~~~~gl~~~~~A~~~~~~-~~~gKvvi~~~  348 (348)
T 2d8a_A          298 ETWYTVSRLLQSGKLNLDPIITHKYKGFDKYEEAFELMRA-GKTGKVVFMLK  348 (348)
T ss_dssp             HHHHHHHHHHHHTCCCCTTTEEEEEESSTTHHHHHHHHHT-TCCSEEEEEC-
T ss_pred             HHHHHHHHHHHcCCCChHHhheeeCCCHHHHHHHHHHHhC-CCceEEEEeeC
Confidence            668899999999995  566788999 9999999999977 56799999874

>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}

Probab=99.97  E-value=2.8e-30  Score=203.67  Aligned_cols=188  Identities=18%  Similarity=0.237  Sum_probs=161.2

Q ss_pred             chhhHHHHHHHh-cCCCCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHH
Q 028523            2 PGMTAYAGFFEV-CSPKQGEYVFVSAASGAVGQLVGQFAKLVGC-YVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDA   79 (208)
Q Consensus         2 ~~~tA~~~l~~~-~~~~~g~~vli~ga~g~vG~~a~qla~~~g~-~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~   79 (208)
                      +++|||+++... +++++|++|||+|+ |++|++++|+|+.+|+ +|+++++++++.++++ ++|++.++++++. ++.+
T Consensus       196 ~~~ta~~al~~~~~~~~~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~-~lGa~~vi~~~~~-~~~~  272 (404)
T 3ip1_A          196 PTSVAYNAVIVRGGGIRPGDNVVILGG-GPIGLAAVAILKHAGASKVILSEPSEVRRNLAK-ELGADHVIDPTKE-NFVE  272 (404)
T ss_dssp             HHHHHHHHHTTTSCCCCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHH-HHTCSEEECTTTS-CHHH
T ss_pred             HHHHHHHHHHHhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHH-HcCCCEEEcCCCC-CHHH
Confidence            467999999755 48999999999997 9999999999999999 9999999999999999 9999999999887 8999


Q ss_pred             HHHhHCCC-CccEEEeCCCch--hHHHHHHhh----ccCCEEEEEecccccCCCCCCCccchHHHhhcceeEEEeecccc
Q 028523           80 ALKRYFPE-GINIYFENVGGK--MLDAVLLNM----RIQGRITLCGMISQYNNDKPEGVHNLTCLISKRIRMEGFLVPDY  152 (208)
Q Consensus        80 ~~~~~~~~-~~d~v~d~~g~~--~~~~~~~~l----~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  152 (208)
                      .+++.+++ ++|++|||+|++  .+..++++|    +++|+++.+|...+      ....+...++.+++++.|+.....
T Consensus       273 ~i~~~t~g~g~D~vid~~g~~~~~~~~~~~~l~~~~~~~G~iv~~G~~~~------~~~~~~~~~~~~~~~i~g~~~~~~  346 (404)
T 3ip1_A          273 AVLDYTNGLGAKLFLEATGVPQLVWPQIEEVIWRARGINATVAIVARADA------KIPLTGEVFQVRRAQIVGSQGHSG  346 (404)
T ss_dssp             HHHHHTTTCCCSEEEECSSCHHHHHHHHHHHHHHCSCCCCEEEECSCCCS------CEEECHHHHHHTTCEEEECCCCCS
T ss_pred             HHHHHhCCCCCCEEEECCCCcHHHHHHHHHHHHhccCCCcEEEEeCCCCC------CCcccHHHHhccceEEEEecCCCc
Confidence            99999988 999999999976  677777777    99999999998653      234567778889999998875331


Q ss_pred             ccchHHHHHHHHHHHHCCCce--eeeeeeecCCcHHHHHHHHhcCCccceEEEEecC
Q 028523          153 FHLYPKFLEMMIPRIKEGKIV--YVEDKAEGLESAPAALVGLFSGRNVGKQVVEVAT  207 (208)
Q Consensus       153 ~~~~~~~~~~~~~~~~~g~~~--~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~~~  207 (208)
                          .+.++++++++++| ++  +.++++|+++++.+|++.+.    .||+||++++
T Consensus       347 ----~~~~~~~~~ll~~g-l~~~~~i~~~~~l~~~~~A~~~~~----~GKvvl~~~~  394 (404)
T 3ip1_A          347 ----HGTFPRVISLMASG-MDMTKIISKTVSMEEIPEYIKRLQ----TDKSLVKVTM  394 (404)
T ss_dssp             ----TTHHHHHHHHHHTT-CCGGGGCCEEECGGGHHHHHHHTT----TCTTCSCEEE
T ss_pred             ----hHHHHHHHHHHHcC-CChhheEEEEeeHHHHHHHHHHHh----CCcEEEecCC
Confidence                34578999999999 65  45788999999999999987    5788887754

>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}

Probab=99.97  E-value=3.4e-30  Score=202.89  Aligned_cols=195  Identities=18%  Similarity=0.267  Sum_probs=162.1

Q ss_pred             chhhHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHhcCCCeeEecCCCccH-HH
Q 028523            2 PGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGC-YVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDL-DA   79 (208)
Q Consensus         2 ~~~tA~~~l~~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g~-~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~-~~   79 (208)
                      +++|||+++ +.+++++|++|||+|+ |++|++++|+|+.+|+ +|+++++++++++.++ ++|++ ++++++. ++ .+
T Consensus       170 ~~~ta~~al-~~~~~~~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~-~lGa~-~i~~~~~-~~~~~  244 (398)
T 2dph_A          170 ILPTGFHGC-VSAGVKPGSHVYIAGA-GPVGRCAAAGARLLGAACVIVGDQNPERLKLLS-DAGFE-TIDLRNS-APLRD  244 (398)
T ss_dssp             HHHHHHHHH-HHTTCCTTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHH-TTTCE-EEETTSS-SCHHH
T ss_pred             HHHHHHHHH-HHcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHH-HcCCc-EEcCCCc-chHHH
Confidence            467999999 6789999999999996 9999999999999999 9999999999999999 99995 8899876 65 88


Q ss_pred             HHHhHCCC-CccEEEeCCCch---------------hHHHHHHhhccCCEEEEEecccc-cCCC------CCCCccchHH
Q 028523           80 ALKRYFPE-GINIYFENVGGK---------------MLDAVLLNMRIQGRITLCGMISQ-YNND------KPEGVHNLTC  136 (208)
Q Consensus        80 ~~~~~~~~-~~d~v~d~~g~~---------------~~~~~~~~l~~~G~~v~~g~~~~-~~~~------~~~~~~~~~~  136 (208)
                      .+++.+++ ++|++||++|++               .+..++++|+++|+++.+|.... .+..      .....++...
T Consensus       245 ~~~~~~~g~g~Dvvid~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~gG~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~  324 (398)
T 2dph_A          245 QIDQILGKPEVDCGVDAVGFEAHGLGDEANTETPNGALNSLFDVVRAGGAIGIPGIYVGSDPDPVNKDAGSGRLHLDFGK  324 (398)
T ss_dssp             HHHHHHSSSCEEEEEECSCTTCBCSGGGTTSBCTTHHHHHHHHHEEEEEEEECCSCCCSCCSSCSSHHHHTTEEEEEHHH
T ss_pred             HHHHHhCCCCCCEEEECCCCccccccccccccccHHHHHHHHHHHhcCCEEEEeccccccccccccccccCCcccccHHH
Confidence            88888877 899999999964               58999999999999999987521 0000      0112344556


Q ss_pred             HhhcceeEEEeeccccccchHHHHHHHHHHHHCCCce--e--eeeeeecCCcHHHHHHHHhcCCccceEEEEecC
Q 028523          137 LISKRIRMEGFLVPDYFHLYPKFLEMMIPRIKEGKIV--Y--VEDKAEGLESAPAALVGLFSGRNVGKQVVEVAT  207 (208)
Q Consensus       137 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~--~--~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~~~  207 (208)
                      ++.+++++.++....     .+.++++++++++|+++  +  .++++|+++++.+|++.+.+++. +|+||+++.
T Consensus       325 ~~~k~~~i~g~~~~~-----~~~~~~~~~l~~~g~l~~~~~~~i~~~~~l~~~~~A~~~~~~~~~-gKvvv~~~~  393 (398)
T 2dph_A          325 MWTKSIRIMTGMAPV-----TNYNRHLTEAILWDQMPYLSKVMNIEVITLDQAPDGYAKFDKGSP-AKFVIDPHG  393 (398)
T ss_dssp             HHHTTCEEECSSCCG-----GGTHHHHHHHHHTTCCHHHHHHHCEEEECSTTHHHHHHHHHTTCS-CEEEECTTS
T ss_pred             HhhcCCEEEEeccCc-----HHHHHHHHHHHHcCCCCccchhhEEEEEcHHHHHHHHHHHhcCCc-eEEEEecCc
Confidence            778889888765432     45588999999999998  6  57889999999999999999888 999998753

>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*

Probab=99.97  E-value=2.5e-29  Score=196.53  Aligned_cols=194  Identities=21%  Similarity=0.247  Sum_probs=162.2

Q ss_pred             chhhHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHhcCCCeeEecCC-CccHHH
Q 028523            2 PGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGC-YVVGSAGSKDKVDLLKNKFGFDEAFNYKE-EPDLDA   79 (208)
Q Consensus         2 ~~~tA~~~l~~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g~-~v~~~~~s~~~~~~~~~~~g~~~v~~~~~-~~~~~~   79 (208)
                      +++|||+++.+.+++++|++|||+|+ |++|++++|+|+.+|+ +|+++++++++.+.++ ++|++.++++++ ..++.+
T Consensus       174 ~~~ta~~~l~~~~~~~~g~~VlV~Ga-G~vG~~avqla~~~Ga~~Vi~~~~~~~~~~~~~-~lGa~~vi~~~~~~~~~~~  251 (373)
T 2fzw_A          174 GISTGYGAAVNTAKLEPGSVCAVFGL-GGVGLAVIMGCKVAGASRIIGVDINKDKFARAK-EFGATECINPQDFSKPIQE  251 (373)
T ss_dssp             HHHHHHHHHHTTTCCCTTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHH-HHTCSEEECGGGCSSCHHH
T ss_pred             HHHHHHHHHHhhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHH-HcCCceEeccccccccHHH
Confidence            46799999988899999999999995 9999999999999999 8999999999999999 999999999875 127888


Q ss_pred             HHHhHCCCCccEEEeCCCc-hhHHHHHHhhccC-CEEEEEecccccCCCCCCCccchHHHhhcceeEEEeeccccccchH
Q 028523           80 ALKRYFPEGINIYFENVGG-KMLDAVLLNMRIQ-GRITLCGMISQYNNDKPEGVHNLTCLISKRIRMEGFLVPDYFHLYP  157 (208)
Q Consensus        80 ~~~~~~~~~~d~v~d~~g~-~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  157 (208)
                      .+++.+++++|++||++|+ +.+..++++|+++ |+++.+|....    ......+...++.++ ++.|+....+.  ..
T Consensus       252 ~v~~~~~~g~D~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~----~~~~~~~~~~~~~~~-~i~g~~~~~~~--~~  324 (373)
T 2fzw_A          252 VLIEMTDGGVDYSFECIGNVKVMRAALEACHKGWGVSVVVGVAAS----GEEIATRPFQLVTGR-TWKGTAFGGWK--SV  324 (373)
T ss_dssp             HHHHHTTSCBSEEEECSCCHHHHHHHHHTBCTTTCEEEECSCCCT----TCCEEECTHHHHTTC-EEEECSGGGCC--HH
T ss_pred             HHHHHhCCCCCEEEECCCcHHHHHHHHHhhccCCcEEEEEecCCC----CceeeeCHHHHhcCC-EEEEeccCCCC--cH
Confidence            8888887789999999996 6889999999999 99999987542    111233445566677 88887654321  25


Q ss_pred             HHHHHHHHHHHCCCce--eeeeeeecCCcHHHHHHHHhcCCccceEEEEe
Q 028523          158 KFLEMMIPRIKEGKIV--YVEDKAEGLESAPAALVGLFSGRNVGKQVVEV  205 (208)
Q Consensus       158 ~~~~~~~~~~~~g~~~--~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~  205 (208)
                      +.++++++++++|+++  +.++++|+++++++|++.+.+++. +|+||++
T Consensus       325 ~~~~~~~~l~~~g~l~~~~~i~~~~~l~~~~~A~~~~~~~~~-~kvvi~~  373 (373)
T 2fzw_A          325 ESVPKLVSEYMSKKIKVDEFVTHNLSFDEINKAFELMHSGKS-IRTVVKI  373 (373)
T ss_dssp             HHHHHHHHHHHTTSSCSGGGEEEEEEGGGHHHHHHHHHHTCC-SEEEEEC
T ss_pred             HHHHHHHHHHHcCCCCchheEeEEeeHHHHHHHHHHHhCCCc-ceEEEeC
Confidence            6789999999999987  457889999999999999998875 6999875

>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1

Probab=99.97  E-value=2.9e-29  Score=196.15  Aligned_cols=193  Identities=18%  Similarity=0.181  Sum_probs=161.9

Q ss_pred             chhhHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHhcCCCeeEecCC-CccHHH
Q 028523            2 PGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGC-YVVGSAGSKDKVDLLKNKFGFDEAFNYKE-EPDLDA   79 (208)
Q Consensus         2 ~~~tA~~~l~~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g~-~v~~~~~s~~~~~~~~~~~g~~~v~~~~~-~~~~~~   79 (208)
                      +++|||+++.+.+++++|++|||+|+ |++|++++|+|+.+|+ +|+++++++++.+.++ ++|++.++++++ ..++.+
T Consensus       176 ~~~ta~~~l~~~~~~~~g~~VlV~Ga-G~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~-~lGa~~vi~~~~~~~~~~~  253 (374)
T 1cdo_A          176 GVSTGFGAAVNTAKVEPGSTCAVFGL-GAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAK-VFGATDFVNPNDHSEPISQ  253 (374)
T ss_dssp             HHHHHHHHHHTTTCCCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHH-HTTCCEEECGGGCSSCHHH
T ss_pred             HHHHHHHHHHhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHH-HhCCceEEeccccchhHHH
Confidence            46799999988899999999999995 9999999999999999 8999999999999999 999999999875 126888


Q ss_pred             HHHhHCCCCccEEEeCCCc-hhHHHHHHhhccC-CEEEEEecccccCCCCCCCccchHHHhhcceeEEEeeccccccchH
Q 028523           80 ALKRYFPEGINIYFENVGG-KMLDAVLLNMRIQ-GRITLCGMISQYNNDKPEGVHNLTCLISKRIRMEGFLVPDYFHLYP  157 (208)
Q Consensus        80 ~~~~~~~~~~d~v~d~~g~-~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  157 (208)
                      .+++.+++++|++||++|+ +.+..++++|+++ |+++.+|...+     .....+...++.++ ++.|+....+.  ..
T Consensus       254 ~~~~~~~~g~D~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~-----~~~~~~~~~~~~~~-~i~g~~~~~~~--~~  325 (374)
T 1cdo_A          254 VLSKMTNGGVDFSLECVGNVGVMRNALESCLKGWGVSVLVGWTDL-----HDVATRPIQLIAGR-TWKGSMFGGFK--GK  325 (374)
T ss_dssp             HHHHHHTSCBSEEEECSCCHHHHHHHHHTBCTTTCEEEECSCCSS-----SCEEECHHHHHTTC-EEEECSGGGCC--HH
T ss_pred             HHHHHhCCCCCEEEECCCCHHHHHHHHHHhhcCCcEEEEEcCCCC-----CCcccCHHHHhcCC-eEEEEecCCCC--cH
Confidence            8888877789999999996 6889999999999 99999987542     11234445566677 88887654321  25


Q ss_pred             HHHHHHHHHHHCCCce--eeeeeeecCCcHHHHHHHHhcCCccceEEEEe
Q 028523          158 KFLEMMIPRIKEGKIV--YVEDKAEGLESAPAALVGLFSGRNVGKQVVEV  205 (208)
Q Consensus       158 ~~~~~~~~~~~~g~~~--~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~  205 (208)
                      +.++++++++++|+++  +.++++|+++++++|++.+++++. +|+||++
T Consensus       326 ~~~~~~~~l~~~g~l~~~~~i~~~~~l~~~~~A~~~~~~~~~-~kvvi~~  374 (374)
T 1cdo_A          326 DGVPKMVKAYLDKKVKLDEFITHRMPLESVNDAIDLMKHGKC-IRTVLSL  374 (374)
T ss_dssp             HHHHHHHHHHHTTSSCCGGGEEEEEEGGGHHHHHHHHHTTCC-SEEEEEC
T ss_pred             HHHHHHHHHHHcCCCChHHheeeEecHHHHHHHHHHHHCCCe-eEEEEeC
Confidence            6789999999999987  457889999999999999998875 7999875

>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*

Probab=99.97  E-value=3.8e-30  Score=198.98  Aligned_cols=189  Identities=18%  Similarity=0.205  Sum_probs=162.3

Q ss_pred             chhhHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHH
Q 028523            2 PGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGC-YVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAA   80 (208)
Q Consensus         2 ~~~tA~~~l~~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g~-~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~   80 (208)
                      ++.|||+++.+.+++ +|++|||+|+ |++|++++|+|+.+|+ +|+++++++++.+.++ ++ ++.++++++. ++.+.
T Consensus       149 ~~~ta~~~l~~~~~~-~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~-~l-a~~v~~~~~~-~~~~~  223 (343)
T 2dq4_A          149 PFGNAVHTVYAGSGV-SGKSVLITGA-GPIGLMAAMVVRASGAGPILVSDPNPYRLAFAR-PY-ADRLVNPLEE-DLLEV  223 (343)
T ss_dssp             HHHHHHHHHHSTTCC-TTSCEEEECC-SHHHHHHHHHHHHTTCCSEEEECSCHHHHGGGT-TT-CSEEECTTTS-CHHHH
T ss_pred             HHHHHHHHHHHhCCC-CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHH-Hh-HHhccCcCcc-CHHHH
Confidence            356899999657889 9999999998 9999999999999999 9999999999999998 88 9999999876 88888


Q ss_pred             HHhHCCCCccEEEeCCCc-hhHHHHHHhhccCCEEEEEecccccCCCCCCCccch-HHHhhcceeEEEeeccccccchHH
Q 028523           81 LKRYFPEGINIYFENVGG-KMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNL-TCLISKRIRMEGFLVPDYFHLYPK  158 (208)
Q Consensus        81 ~~~~~~~~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~  158 (208)
                      +++.++.++|++||++|+ +.+..++++|+++|+++.+|...+      ....+. ..++.+++++.|+....    ..+
T Consensus       224 ~~~~~~~g~D~vid~~g~~~~~~~~~~~l~~~G~iv~~g~~~~------~~~~~~~~~~~~~~~~i~g~~~~~----~~~  293 (343)
T 2dq4_A          224 VRRVTGSGVEVLLEFSGNEAAIHQGLMALIPGGEARILGIPSD------PIRFDLAGELVMRGITAFGIAGRR----LWQ  293 (343)
T ss_dssp             HHHHHSSCEEEEEECSCCHHHHHHHHHHEEEEEEEEECCCCSS------CEEECHHHHTGGGTCEEEECCSCC----TTH
T ss_pred             HHHhcCCCCCEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCC------CceeCcHHHHHhCceEEEEeecCC----CHH
Confidence            888874489999999997 789999999999999999987531      223445 56778899999876541    256


Q ss_pred             HHHHHHHHHHCCCc--eeeeeeeecCCcHHHHHHHHhcCCccceEEEEec
Q 028523          159 FLEMMIPRIKEGKI--VYVEDKAEGLESAPAALVGLFSGRNVGKQVVEVA  206 (208)
Q Consensus       159 ~~~~~~~~~~~g~~--~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~~  206 (208)
                      .++++++++++|++  ++.++++|+++++++|++.+.+++. +|+||+++
T Consensus       294 ~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~A~~~~~~~~~-gKvv~~~~  342 (343)
T 2dq4_A          294 TWMQGTALVYSGRVDLSPLLTHRLPLSRYREAFGLLASGQA-VKVILDPK  342 (343)
T ss_dssp             HHHHHHHHHHHTSSCCGGGEEEEEEGGGHHHHHHHHHHSSC-SEEEEETT
T ss_pred             HHHHHHHHHHcCCCChHHheeEEecHHHHHHHHHHHhcCCc-eEEEEeeC
Confidence            78899999999995  5677889999999999999998887 99999875

>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...

Probab=99.97  E-value=5.1e-29  Score=194.77  Aligned_cols=194  Identities=20%  Similarity=0.218  Sum_probs=162.1

Q ss_pred             chhhHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHhcCCCeeEecCC-CccHHH
Q 028523            2 PGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGC-YVVGSAGSKDKVDLLKNKFGFDEAFNYKE-EPDLDA   79 (208)
Q Consensus         2 ~~~tA~~~l~~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g~-~v~~~~~s~~~~~~~~~~~g~~~v~~~~~-~~~~~~   79 (208)
                      +++|||+++.+.+++++|++|||+|+ |++|++++|+|+.+|+ +|+++++++++.+.++ ++|++.++|+++ .+++.+
T Consensus       175 ~~~ta~~~l~~~~~~~~g~~VlV~Ga-G~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~-~lGa~~vi~~~~~~~~~~~  252 (374)
T 2jhf_A          175 GFSTGYGSAVKVAKVTQGSTCAVFGL-GGVGLSVIMGCKAAGAARIIGVDINKDKFAKAK-EVGATECVNPQDYKKPIQE  252 (374)
T ss_dssp             HHHHHHHHHHTTTCCCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHH-HTTCSEEECGGGCSSCHHH
T ss_pred             HHHHHHHHHHhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHH-HhCCceEecccccchhHHH
Confidence            46799999988899999999999995 9999999999999999 8999999999999998 999999999875 126888


Q ss_pred             HHHhHCCCCccEEEeCCCc-hhHHHHHHhhccC-CEEEEEecccccCCCCCCCccchHHHhhcceeEEEeeccccccchH
Q 028523           80 ALKRYFPEGINIYFENVGG-KMLDAVLLNMRIQ-GRITLCGMISQYNNDKPEGVHNLTCLISKRIRMEGFLVPDYFHLYP  157 (208)
Q Consensus        80 ~~~~~~~~~~d~v~d~~g~-~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  157 (208)
                      .+++.+++++|++||++|+ +.+..++++++++ |+++.+|....    ......+...++.++ ++.|+....+.  ..
T Consensus       253 ~~~~~~~~g~D~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~----~~~~~~~~~~~~~~~-~i~g~~~~~~~--~~  325 (374)
T 2jhf_A          253 VLTEMSNGGVDFSFEVIGRLDTMVTALSCCQEAYGVSVIVGVPPD----SQNLSMNPMLLLSGR-TWKGAIFGGFK--SK  325 (374)
T ss_dssp             HHHHHTTSCBSEEEECSCCHHHHHHHHHHBCTTTCEEEECSCCCT----TCCEEECTHHHHTTC-EEEECSGGGCC--HH
T ss_pred             HHHHHhCCCCcEEEECCCCHHHHHHHHHHhhcCCcEEEEeccCCC----CCccccCHHHHhcCC-eEEEeccCCCC--hH
Confidence            8888877789999999996 7889999999999 99999987542    111233445566677 88887654321  25


Q ss_pred             HHHHHHHHHHHCCCcee--eeeeeecCCcHHHHHHHHhcCCccceEEEEe
Q 028523          158 KFLEMMIPRIKEGKIVY--VEDKAEGLESAPAALVGLFSGRNVGKQVVEV  205 (208)
Q Consensus       158 ~~~~~~~~~~~~g~~~~--~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~  205 (208)
                      +.++++++++++|++++  .++++|+++++.+|++.+.+++. +|+||++
T Consensus       326 ~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~-~Kvvi~~  374 (374)
T 2jhf_A          326 DSVPKLVADFMAKKFALDPLITHVLPFEKINEGFDLLRSGES-IRTILTF  374 (374)
T ss_dssp             HHHHHHHHHHHTTSSCCGGGEEEEEEGGGHHHHHHHHHTTCC-SEEEEEC
T ss_pred             HHHHHHHHHHHcCCCCchhheEEEEeHHHHHHHHHHHHCCCc-ceEEEeC
Confidence            67899999999999874  57889999999999999998875 7999875

>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}

Probab=99.97  E-value=2.4e-29  Score=194.82  Aligned_cols=193  Identities=23%  Similarity=0.330  Sum_probs=164.9

Q ss_pred             chhhHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHHH
Q 028523            2 PGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAAL   81 (208)
Q Consensus         2 ~~~tA~~~l~~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~~   81 (208)
                      +++|||+++.+ .++++|++|||+|++|++|++++|+++..|++|+++++++++.+.++ ++|++.++|+.+.+++.+.+
T Consensus       154 ~~~ta~~~l~~-~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~V~~~~~~~~~~~~~~-~~g~~~~~d~~~~~~~~~~~  231 (347)
T 2hcy_A          154 AGITVYKALKS-ANLMAGHWVAISGAAGGLGSLAVQYAKAMGYRVLGIDGGEGKEELFR-SIGGEVFIDFTKEKDIVGAV  231 (347)
T ss_dssp             HHHHHHHHHHT-TTCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSTTHHHHHH-HTTCCEEEETTTCSCHHHHH
T ss_pred             hHHHHHHHHHh-cCCCCCCEEEEECCCchHHHHHHHHHHHCCCcEEEEcCCHHHHHHHH-HcCCceEEecCccHhHHHHH
Confidence            46799999965 58999999999999999999999999999999999999999998888 89999899987433788888


Q ss_pred             HhHCCCCccEEEeCCCc-hhHHHHHHhhccCCEEEEEecccccCCCCCCCccchHHHhhcceeEEEeeccccccchHHHH
Q 028523           82 KRYFPEGINIYFENVGG-KMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCLISKRIRMEGFLVPDYFHLYPKFL  160 (208)
Q Consensus        82 ~~~~~~~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (208)
                      ++.+.+++|++||++|. ..+..++++|+++|+++.+|...+     .....+...++.+++++.|+....     .+.+
T Consensus       232 ~~~~~~~~D~vi~~~g~~~~~~~~~~~l~~~G~iv~~g~~~~-----~~~~~~~~~~~~~~~~i~g~~~~~-----~~~~  301 (347)
T 2hcy_A          232 LKATDGGAHGVINVSVSEAAIEASTRYVRANGTTVLVGMPAG-----AKCCSDVFNQVVKSISIVGSYVGN-----RADT  301 (347)
T ss_dssp             HHHHTSCEEEEEECSSCHHHHHHHTTSEEEEEEEEECCCCTT-----CEEEEEHHHHHHTTCEEEECCCCC-----HHHH
T ss_pred             HHHhCCCCCEEEECCCcHHHHHHHHHHHhcCCEEEEEeCCCC-----CCCCCCHHHHhhCCcEEEEccCCC-----HHHH
Confidence            87765589999999996 789999999999999999987542     122345566778999999877544     5678


Q ss_pred             HHHHHHHHCCCceeeeeeeecCCcHHHHHHHHhcCCccceEEEEecC
Q 028523          161 EMMIPRIKEGKIVYVEDKAEGLESAPAALVGLFSGRNVGKQVVEVAT  207 (208)
Q Consensus       161 ~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~~~  207 (208)
                      +++++++++|.+++.+ ++|+++++++|++.+.+++..||+||++++
T Consensus       302 ~~~~~l~~~g~l~~~~-~~~~l~~~~~A~~~~~~~~~~gKvvv~~~~  347 (347)
T 2hcy_A          302 REALDFFARGLVKSPI-KVVGLSTLPEIYEKMEKGQIVGRYVVDTSK  347 (347)
T ss_dssp             HHHHHHHHTTSCCCCE-EEEEGGGHHHHHHHHHTTCCSSEEEEESCC
T ss_pred             HHHHHHHHhCCCccce-EEEcHHHHHHHHHHHHcCCcceeEEEecCC
Confidence            8999999999999864 689999999999999998888999998863

>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1

Probab=99.97  E-value=3.9e-30  Score=197.87  Aligned_cols=195  Identities=22%  Similarity=0.287  Sum_probs=153.3

Q ss_pred             chhhHHHHHHH--hcCCCCCC-EEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHH
Q 028523            2 PGMTAYAGFFE--VCSPKQGE-YVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLD   78 (208)
Q Consensus         2 ~~~tA~~~l~~--~~~~~~g~-~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~   78 (208)
                      +++|||.++..  .+++++|+ +|||+|++|++|++++|+|+..|++|+++++++++.+.++ ++|++.++|+++. + .
T Consensus       130 ~~~ta~~~l~~~~~~~~~~g~~~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~~~~~~-~lGa~~~i~~~~~-~-~  206 (328)
T 1xa0_A          130 AGFTAALSIHRLEEHGLTPERGPVLVTGATGGVGSLAVSMLAKRGYTVEASTGKAAEHDYLR-VLGAKEVLAREDV-M-A  206 (328)
T ss_dssp             HHHHHHHHHHHHHHTTCCGGGCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESCTTCHHHHH-HTTCSEEEECC------
T ss_pred             hHHHHHHHHHHHhhcCCCCCCceEEEecCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-HcCCcEEEecCCc-H-H
Confidence            35689988753  36789987 9999999999999999999999999999999999999998 8999999998764 3 3


Q ss_pred             HHHHhHCCCCccEEEeCCCchhHHHHHHhhccCCEEEEEecccccCCCCCCCccchHHHhhcceeEEEeecccc-ccchH
Q 028523           79 AALKRYFPEGINIYFENVGGKMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCLISKRIRMEGFLVPDY-FHLYP  157 (208)
Q Consensus        79 ~~~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~  157 (208)
                      +.+++.+++++|++|||+|++.+..++++++++|+++.+|...+.     ....+...++.+++++.|+..... .....
T Consensus       207 ~~~~~~~~~~~d~vid~~g~~~~~~~~~~l~~~G~~v~~G~~~~~-----~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~  281 (328)
T 1xa0_A          207 ERIRPLDKQRWAAAVDPVGGRTLATVLSRMRYGGAVAVSGLTGGA-----EVPTTVHPFILRGVSLLGIDSVYCPMDLRL  281 (328)
T ss_dssp             -----CCSCCEEEEEECSTTTTHHHHHHTEEEEEEEEECSCCSSS-----CCCCCSHHHHHTTCEEEECCSSSCCHHHHH
T ss_pred             HHHHHhcCCcccEEEECCcHHHHHHHHHhhccCCEEEEEeecCCC-----CCCCchhhhhhcCceEEEEecccCCHHHHH
Confidence            344555545899999999988999999999999999999876531     122334566789999998754322 22234


Q ss_pred             HHHHHHHHHHHCCCceeeeeeeecCCcHHHHHHHHhcCCccceEEEEec
Q 028523          158 KFLEMMIPRIKEGKIVYVEDKAEGLESAPAALVGLFSGRNVGKQVVEVA  206 (208)
Q Consensus       158 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~~  206 (208)
                      +.++.+.+++.+| +++ ++++|+++++++|++.+++++..||+||+++
T Consensus       282 ~~~~~~~~~~~~g-l~~-~~~~~~l~~~~~A~~~~~~~~~~gKvvv~~~  328 (328)
T 1xa0_A          282 RIWERLAGDLKPD-LER-IAQEISLAELPQALKRILRGELRGRTVVRLA  328 (328)
T ss_dssp             HHHHHHHTTTCCC-HHH-HEEEEEGGGHHHHHHHHHHTCCCSEEEEECC
T ss_pred             HHHHHHHHHHHcC-Cce-eeeEeCHHHHHHHHHHHHcCCCCCeEEEEeC
Confidence            5677888888888 776 4689999999999999999988899999874

>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A

Probab=99.97  E-value=2.6e-30  Score=201.09  Aligned_cols=187  Identities=16%  Similarity=0.124  Sum_probs=158.8

Q ss_pred             chhhHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHHH
Q 028523            2 PGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAAL   81 (208)
Q Consensus         2 ~~~tA~~~l~~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~~   81 (208)
                      +++|||+++.+ +++++|++|||+|+ |++|++++|+|+.+|++|+++++++++.+.++ ++|++.++++++..++.+.+
T Consensus       164 ~~~ta~~~l~~-~~~~~g~~VlV~Ga-G~vG~~~~qlak~~Ga~Vi~~~~~~~~~~~~~-~lGa~~v~~~~~~~~~~~~~  240 (360)
T 1piw_A          164 GGLTVYSPLVR-NGCGPGKKVGIVGL-GGIGSMGTLISKAMGAETYVISRSSRKREDAM-KMGADHYIATLEEGDWGEKY  240 (360)
T ss_dssp             HHHHHHHHHHH-TTCSTTCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSSTTHHHHH-HHTCSEEEEGGGTSCHHHHS
T ss_pred             hHHHHHHHHHH-cCCCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHH-HcCCCEEEcCcCchHHHHHh
Confidence            46799999966 89999999999998 99999999999999999999999999999999 89999999987531344433


Q ss_pred             HhHCCCCccEEEeCCCc---hhHHHHHHhhccCCEEEEEecccccCCCCCCCccchHHHhhcceeEEEeeccccccchHH
Q 028523           82 KRYFPEGINIYFENVGG---KMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCLISKRIRMEGFLVPDYFHLYPK  158 (208)
Q Consensus        82 ~~~~~~~~d~v~d~~g~---~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  158 (208)
                      .    +++|++||++|+   ..+..++++|+++|+++.+|...+      ....+...++.+++++.++....     .+
T Consensus       241 ~----~~~D~vid~~g~~~~~~~~~~~~~l~~~G~iv~~g~~~~------~~~~~~~~~~~~~~~i~g~~~~~-----~~  305 (360)
T 1piw_A          241 F----DTFDLIVVCASSLTDIDFNIMPKAMKVGGRIVSISIPEQ------HEMLSLKPYGLKAVSISYSALGS-----IK  305 (360)
T ss_dssp             C----SCEEEEEECCSCSTTCCTTTGGGGEEEEEEEEECCCCCS------SCCEEECGGGCBSCEEEECCCCC-----HH
T ss_pred             h----cCCCEEEECCCCCcHHHHHHHHHHhcCCCEEEEecCCCC------ccccCHHHHHhCCeEEEEEecCC-----HH
Confidence            2    479999999997   688899999999999999987542      11234445677889998877644     56


Q ss_pred             HHHHHHHHHHCCCceeeeeeeecCCc--HHHHHHHHhcCCccceEEEEecC
Q 028523          159 FLEMMIPRIKEGKIVYVEDKAEGLES--APAALVGLFSGRNVGKQVVEVAT  207 (208)
Q Consensus       159 ~~~~~~~~~~~g~~~~~~~~~~~~~~--~~~a~~~~~~~~~~gk~vv~~~~  207 (208)
                      .++++++++++|++++.+ ++|++++  +++|++.+.+++..||+||++++
T Consensus       306 ~~~~~~~l~~~g~l~~~i-~~~~l~~~~~~~A~~~~~~~~~~gKvvi~~~~  355 (360)
T 1piw_A          306 ELNQLLKLVSEKDIKIWV-ETLPVGEAGVHEAFERMEKGDVRYRFTLVGYD  355 (360)
T ss_dssp             HHHHHHHHHHHTTCCCCE-EEEESSHHHHHHHHHHHHHTCCSSEEEEECCH
T ss_pred             HHHHHHHHHHhCCCcceE-EEEeccHhHHHHHHHHHHCCCCceEEEEecCc
Confidence            789999999999999888 8999999  99999999999888999999865

>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=99.97  E-value=1.5e-29  Score=197.28  Aligned_cols=187  Identities=22%  Similarity=0.255  Sum_probs=156.1

Q ss_pred             chhhHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHHH
Q 028523            2 PGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAAL   81 (208)
Q Consensus         2 ~~~tA~~~l~~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~~   81 (208)
                      +++|||+++.+ +++++|++|||+|+ |++|++++|+|+.+|++|+++++++++.+.++ ++|++.++++++. ++.   
T Consensus       179 ~~~tA~~al~~-~~~~~g~~VlV~Ga-G~vG~~aiqlak~~Ga~Vi~~~~~~~~~~~a~-~lGa~~vi~~~~~-~~~---  251 (369)
T 1uuf_A          179 AGITTYSPLRH-WQAGPGKKVGVVGI-GGLGHMGIKLAHAMGAHVVAFTTSEAKREAAK-ALGADEVVNSRNA-DEM---  251 (369)
T ss_dssp             HHHHHHHHHHH-TTCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSGGGHHHHH-HHTCSEEEETTCH-HHH---
T ss_pred             hHHHHHHHHHh-cCCCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HcCCcEEeccccH-HHH---
Confidence            46799999966 68999999999997 99999999999999999999999999999999 8999999998764 433   


Q ss_pred             HhHCCCCccEEEeCCCch-hHHHHHHhhccCCEEEEEecccccCCCCCCCccchHHHhhcceeEEEeeccccccchHHHH
Q 028523           82 KRYFPEGINIYFENVGGK-MLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCLISKRIRMEGFLVPDYFHLYPKFL  160 (208)
Q Consensus        82 ~~~~~~~~d~v~d~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (208)
                      .+.. +++|++||++|++ .+..++++|+++|+++.+|...+     .....+...++.+++++.|+....     .+.+
T Consensus       252 ~~~~-~g~Dvvid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~-----~~~~~~~~~~~~~~~~i~g~~~~~-----~~~~  320 (369)
T 1uuf_A          252 AAHL-KSFDFILNTVAAPHNLDDFTTLLKRDGTMTLVGAPAT-----PHKSPEVFNLIMKRRAIAGSMIGG-----IPET  320 (369)
T ss_dssp             HTTT-TCEEEEEECCSSCCCHHHHHTTEEEEEEEEECCCC------------CHHHHHTTTCEEEECCSCC-----HHHH
T ss_pred             HHhh-cCCCEEEECCCCHHHHHHHHHHhccCCEEEEeccCCC-----CccccCHHHHHhCCcEEEEeecCC-----HHHH
Confidence            3333 4799999999964 79999999999999999987542     111344566778999999887644     4668


Q ss_pred             HHHHHHHHCCCceeeeeeeecCCcHHHHHHHHhcCCccceEEEEecC
Q 028523          161 EMMIPRIKEGKIVYVEDKAEGLESAPAALVGLFSGRNVGKQVVEVAT  207 (208)
Q Consensus       161 ~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~~~  207 (208)
                      +++++++++|.+++.+. +|+++++++|++.+.+++..||+||++++
T Consensus       321 ~~~~~l~~~g~i~~~i~-~~~l~~~~~A~~~~~~~~~~gKvvi~~~~  366 (369)
T 1uuf_A          321 QEMLDFCAEHGIVADIE-MIRADQINEAYERMLRGDVKYRFVIDNRT  366 (369)
T ss_dssp             HHHHHHHHHHTCCCCEE-EECGGGHHHHHHHHHTTCSSSEEEEEGGG
T ss_pred             HHHHHHHHhCCCCcceE-EEcHHHHHHHHHHHHcCCCceEEEEecCC
Confidence            89999999999998765 69999999999999998888999999864

>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}

Probab=99.97  E-value=1e-29  Score=197.02  Aligned_cols=184  Identities=17%  Similarity=0.162  Sum_probs=155.5

Q ss_pred             chhhHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHHH
Q 028523            2 PGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAAL   81 (208)
Q Consensus         2 ~~~tA~~~l~~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~~   81 (208)
                      +++|||+++.+ .++++|++|||+|+ |++|++++|+|+.+|++|+++++++++.+.++ ++|++.++ . +. +   .+
T Consensus       161 ~~~ta~~~l~~-~~~~~g~~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~-~lGa~~v~-~-~~-~---~~  231 (348)
T 3two_A          161 AGITTYSPLKF-SKVTKGTKVGVAGF-GGLGSMAVKYAVAMGAEVSVFARNEHKKQDAL-SMGVKHFY-T-DP-K---QC  231 (348)
T ss_dssp             HHHHHHHHHHH-TTCCTTCEEEEESC-SHHHHHHHHHHHHTTCEEEEECSSSTTHHHHH-HTTCSEEE-S-SG-G---GC
T ss_pred             hHHHHHHHHHh-cCCCCCCEEEEECC-cHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHH-hcCCCeec-C-CH-H---HH
Confidence            46799999965 68999999999996 99999999999999999999999999999999 89999988 3 22 1   11


Q ss_pred             HhHCCCCccEEEeCCCch-hHHHHHHhhccCCEEEEEecccccCCCCCCCccchHHHh-hcceeEEEeeccccccchHHH
Q 028523           82 KRYFPEGINIYFENVGGK-MLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCLI-SKRIRMEGFLVPDYFHLYPKF  159 (208)
Q Consensus        82 ~~~~~~~~d~v~d~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~  159 (208)
                      .    .++|++||++|++ .+..++++|+++|+++.+|.....    +....+...++ .+++++.|+....     .+.
T Consensus       232 ~----~~~D~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~----~~~~~~~~~~~~~~~~~i~g~~~~~-----~~~  298 (348)
T 3two_A          232 K----EELDFIISTIPTHYDLKDYLKLLTYNGDLALVGLPPVE----VAPVLSVFDFIHLGNRKVYGSLIGG-----IKE  298 (348)
T ss_dssp             C----SCEEEEEECCCSCCCHHHHHTTEEEEEEEEECCCCCGG----GCCEEEHHHHHHTCSCEEEECCSCC-----HHH
T ss_pred             h----cCCCEEEECCCcHHHHHHHHHHHhcCCEEEEECCCCCC----CcccCCHHHHHhhCCeEEEEEecCC-----HHH
Confidence            1    1799999999976 999999999999999999875411    11114455666 8999999988765     566


Q ss_pred             HHHHHHHHHCCCceeeeeeeecCCcHHHHHHHHhcCCccceEEEEecCC
Q 028523          160 LEMMIPRIKEGKIVYVEDKAEGLESAPAALVGLFSGRNVGKQVVEVATE  208 (208)
Q Consensus       160 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~~~~  208 (208)
                      ++++++++++|.+++.+ ++++++++++|++.+.+++..||+||+++++
T Consensus       299 ~~~~~~l~~~g~l~~~~-~~~~l~~~~~A~~~~~~~~~~gKvVi~~~~~  346 (348)
T 3two_A          299 TQEMVDFSIKHNIYPEI-DLILGKDIDTAYHNLTHGKAKFRYVIDMKKS  346 (348)
T ss_dssp             HHHHHHHHHHTTCCCCE-EEECGGGHHHHHHHHHTTCCCSEEEEEGGGC
T ss_pred             HHHHHHHHHhCCCCceE-EEEEHHHHHHHHHHHHcCCCceEEEEecCCc
Confidence            88999999999999865 6999999999999999999999999999764

>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A*

Probab=99.97  E-value=6.4e-31  Score=202.39  Aligned_cols=196  Identities=23%  Similarity=0.345  Sum_probs=157.5

Q ss_pred             chhhHHHHHHH--hcCCCCCC-EEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHH
Q 028523            2 PGMTAYAGFFE--VCSPKQGE-YVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLD   78 (208)
Q Consensus         2 ~~~tA~~~l~~--~~~~~~g~-~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~   78 (208)
                      +++|||.++..  .+++++|+ +|||+|++|++|++++|+|+..|++|+++++++++.+.++ ++|++.++|+++. + .
T Consensus       131 ~~~ta~~~l~~~~~~~~~~g~~~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~~~~~~-~lGa~~v~~~~~~-~-~  207 (330)
T 1tt7_A          131 AGFTAALSVHRLEQNGLSPEKGSVLVTGATGGVGGIAVSMLNKRGYDVVASTGNREAADYLK-QLGASEVISREDV-Y-D  207 (330)
T ss_dssp             HHHHHHHHHHHHHHTTCCGGGCCEEEESTTSHHHHHHHHHHHHHTCCEEEEESSSSTHHHHH-HHTCSEEEEHHHH-C-S
T ss_pred             hHHHHHHHHHHHHhcCcCCCCceEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HcCCcEEEECCCc-h-H
Confidence            35688988753  36789997 9999999999999999999999999999999999999998 8999999987532 2 1


Q ss_pred             HHHHhHCCCCccEEEeCCCchhHHHHHHhhccCCEEEEEecccccCCCCCCCccchHHHhhcceeEEEeecccc-ccchH
Q 028523           79 AALKRYFPEGINIYFENVGGKMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCLISKRIRMEGFLVPDY-FHLYP  157 (208)
Q Consensus        79 ~~~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~  157 (208)
                      +.+++.+++++|++|||+|++.+..++++++++|+++.+|...+     .....+...++.+++++.|++.... .....
T Consensus       208 ~~~~~~~~~~~d~vid~~g~~~~~~~~~~l~~~G~iv~~G~~~~-----~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~  282 (330)
T 1tt7_A          208 GTLKALSKQQWQGAVDPVGGKQLASLLSKIQYGGSVAVSGLTGG-----GEVPATVYPFILRGVSLLGIDSVYCPMDVRA  282 (330)
T ss_dssp             SCCCSSCCCCEEEEEESCCTHHHHHHHTTEEEEEEEEECCCSSC-----SCEEECSHHHHTSCCEEEECCSSSCCHHHHH
T ss_pred             HHHHHhhcCCccEEEECCcHHHHHHHHHhhcCCCEEEEEecCCC-----CccCcchHHHHhcCeEEEEEeccccCHHHHH
Confidence            12233344489999999999899999999999999999987542     1122344566789999998754322 22234


Q ss_pred             HHHHHHHHHHHCCCceeeeeeeecCCcHHHHHHHHhcCCccceEEEEe
Q 028523          158 KFLEMMIPRIKEGKIVYVEDKAEGLESAPAALVGLFSGRNVGKQVVEV  205 (208)
Q Consensus       158 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~  205 (208)
                      +.++++.+++.+|.+++.++++|+++++++|++.+.+++..||+||++
T Consensus       283 ~~~~~~~~~~~~g~l~~~i~~~~~l~~~~~A~~~~~~~~~~gKvvi~~  330 (330)
T 1tt7_A          283 AVWERMSSDLKPDQLLTIVDREVSLEETPGALKDILQNRIQGRVIVKL  330 (330)
T ss_dssp             HHHHHTTTTSCCSCSTTSEEEEECSTTHHHHHHHTTTTCCSSEEEECC
T ss_pred             HHHHHHHHHHhcCCcccccceEEcHHHHHHHHHHHHcCCCCCeEEEeC
Confidence            567888888889999988889999999999999999988889999864

>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*

Probab=99.96  E-value=1.1e-28  Score=191.71  Aligned_cols=187  Identities=20%  Similarity=0.225  Sum_probs=156.7

Q ss_pred             chhhHHHHHHHhcCCC-CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHH
Q 028523            2 PGMTAYAGFFEVCSPK-QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAA   80 (208)
Q Consensus         2 ~~~tA~~~l~~~~~~~-~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~   80 (208)
                      +++|||+++.+ .+++ +|++|||+|+ |++|++++|+|+.+|++|+++++++++.+.+++++|++.++++++.    +.
T Consensus       164 ~~~ta~~~l~~-~~~~~~g~~VlV~Ga-G~vG~~a~qlak~~Ga~Vi~~~~~~~~~~~~~~~lGa~~vi~~~~~----~~  237 (357)
T 2cf5_A          164 AGVTVYSPLSH-FGLKQPGLRGGILGL-GGVGHMGVKIAKAMGHHVTVISSSNKKREEALQDLGADDYVIGSDQ----AK  237 (357)
T ss_dssp             HHHHHHHHHHH-TSTTSTTCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSTTHHHHHHTTSCCSCEEETTCH----HH
T ss_pred             hHHHHHHHHHh-cCCCCCCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHcCCceeeccccH----HH
Confidence            46799999965 6788 9999999995 9999999999999999999999999888887768999999998753    34


Q ss_pred             HHhHCCCCccEEEeCCCc-hhHHHHHHhhccCCEEEEEecccccCCCCCCCccchHHHhhcceeEEEeeccccccchHHH
Q 028523           81 LKRYFPEGINIYFENVGG-KMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCLISKRIRMEGFLVPDYFHLYPKF  159 (208)
Q Consensus        81 ~~~~~~~~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (208)
                      +++.++ ++|++||++|+ ..+..++++++++|+++.+|...+     +....+.. ++.+++++.|+....     .+.
T Consensus       238 ~~~~~~-g~D~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~-----~~~~~~~~-~~~~~~~i~g~~~~~-----~~~  305 (357)
T 2cf5_A          238 MSELAD-SLDYVIDTVPVHHALEPYLSLLKLDGKLILMGVINN-----PLQFLTPL-LMLGRKVITGSFIGS-----MKE  305 (357)
T ss_dssp             HHHSTT-TEEEEEECCCSCCCSHHHHTTEEEEEEEEECSCCSS-----CCCCCHHH-HHHHTCEEEECCSCC-----HHH
T ss_pred             HHHhcC-CCCEEEECCCChHHHHHHHHHhccCCEEEEeCCCCC-----CccccCHH-HHhCccEEEEEccCC-----HHH
Confidence            444443 79999999996 478999999999999999987542     11113344 778899999887643     567


Q ss_pred             HHHHHHHHHCCCceeeeeeeecCCcHHHHHHHHhcCCccceEEEEecC
Q 028523          160 LEMMIPRIKEGKIVYVEDKAEGLESAPAALVGLFSGRNVGKQVVEVAT  207 (208)
Q Consensus       160 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~~~  207 (208)
                      ++++++++++|++++.+ ++||++++++|++.+++++..||+||++++
T Consensus       306 ~~~~~~l~~~g~l~~~~-~~~~l~~~~~A~~~~~~~~~~gKvvi~~~~  352 (357)
T 2cf5_A          306 TEEMLEFCKEKGLSSII-EVVKMDYVNTAFERLEKNDVRYRFVVDVEG  352 (357)
T ss_dssp             HHHHHHHHHHTTCCCCE-EEEEGGGHHHHHHHHHTTCSSSEEEEETTS
T ss_pred             HHHHHHHHHcCCCCCce-EEEeHHHHHHHHHHHHCCCCceEEEEeCCc
Confidence            88999999999999876 689999999999999999888999999865

>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*

Probab=99.96  E-value=6.6e-30  Score=198.62  Aligned_cols=186  Identities=13%  Similarity=0.107  Sum_probs=159.0

Q ss_pred             chhhHHHHHHHhcCCCCC------CEEEEecCCchHHHHH-HHHH-HHcCCE-EEEEeCCHH---HHHHHHHhcCCCeeE
Q 028523            2 PGMTAYAGFFEVCSPKQG------EYVFVSAASGAVGQLV-GQFA-KLVGCY-VVGSAGSKD---KVDLLKNKFGFDEAF   69 (208)
Q Consensus         2 ~~~tA~~~l~~~~~~~~g------~~vli~ga~g~vG~~a-~qla-~~~g~~-v~~~~~s~~---~~~~~~~~~g~~~v~   69 (208)
                      +++|||+++ +.+++++|      ++|||+|+ |++|+++ +|+| +.+|++ |++++++++   +.+.++ ++|++.+ 
T Consensus       151 ~~~ta~~al-~~~~~~~g~~~~~~~~VlV~Ga-G~vG~~a~iqla~k~~Ga~~Vi~~~~~~~~~~~~~~~~-~lGa~~v-  226 (357)
T 2b5w_A          151 PISITEKAL-EHAYASRSAFDWDPSSAFVLGN-GSLGLLTLAMLKVDDKGYENLYCLGRRDRPDPTIDIIE-ELDATYV-  226 (357)
T ss_dssp             HHHHHHHHH-HHHHHTTTTSCCCCCEEEEECC-SHHHHHHHHHHHHCTTCCCEEEEEECCCSSCHHHHHHH-HTTCEEE-
T ss_pred             hHHHHHHHH-HhcCCCCCcccCCCCEEEEECC-CHHHHHHHHHHHHHHcCCcEEEEEeCCcccHHHHHHHH-HcCCccc-
Confidence            468999999 66889999      99999998 9999999 9999 999996 999999888   999998 9999999 


Q ss_pred             ecCCCccHHHHHHhHCCCCccEEEeCCCch-hHHHHHHhhccCCEEEEEecccccCCCCCCCccchHHH----hhcceeE
Q 028523           70 NYKEEPDLDAALKRYFPEGINIYFENVGGK-MLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCL----ISKRIRM  144 (208)
Q Consensus        70 ~~~~~~~~~~~~~~~~~~~~d~v~d~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~----~~~~~~~  144 (208)
                      ++++. ++.+ +++. ++++|++||++|++ .+..++++++++|+++.+|...+     .....+...+    +.+++++
T Consensus       227 ~~~~~-~~~~-i~~~-~gg~Dvvid~~g~~~~~~~~~~~l~~~G~iv~~g~~~~-----~~~~~~~~~~~~~~~~~~~~i  298 (357)
T 2b5w_A          227 DSRQT-PVED-VPDV-YEQMDFIYEATGFPKHAIQSVQALAPNGVGALLGVPSD-----WAFEVDAGAFHREMVLHNKAL  298 (357)
T ss_dssp             ETTTS-CGGG-HHHH-SCCEEEEEECSCCHHHHHHHHHHEEEEEEEEECCCCCC-----CCCCCCHHHHHHHHHHTTCEE
T ss_pred             CCCcc-CHHH-HHHh-CCCCCEEEECCCChHHHHHHHHHHhcCCEEEEEeCCCC-----CCceecHHHHhHHHHhCCeEE
Confidence            98876 7777 7777 45899999999974 88999999999999999987642     1123445555    7889999


Q ss_pred             EEeeccccccchHHHHHHHHHHHHCC--C-ceeeeeeeecCCcHHHHHHHHhcCCccceEEEEecC
Q 028523          145 EGFLVPDYFHLYPKFLEMMIPRIKEG--K-IVYVEDKAEGLESAPAALVGLFSGRNVGKQVVEVAT  207 (208)
Q Consensus       145 ~~~~~~~~~~~~~~~~~~~~~~~~~g--~-~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~~~  207 (208)
                      .|+....     .+.++++++++++|  . +++.++++|+++++++|++.+   ...+|+||++++
T Consensus       299 ~g~~~~~-----~~~~~~~~~l~~~g~~~~~~~~i~~~~~l~~~~~A~~~~---~~~gKvvi~~~~  356 (357)
T 2b5w_A          299 VGSVNSH-----VEHFEAATVTFTKLPKWFLEDLVTGVHPLSEFEAAFDDD---DTTIKTAIEFST  356 (357)
T ss_dssp             EECCCCC-----HHHHHHHHHHHHHSCHHHHHHHEEEEEEGGGGGGGGCCS---TTCCEEEEECCC
T ss_pred             EEeccCC-----HHHHHHHHHHHHhCchhhhhhhcceeecHHHHHHHHHHh---CCCceEEEEecC
Confidence            9877654     67789999999999  8 688888999999999999988   346899999875

>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}

Probab=99.96  E-value=2.3e-29  Score=192.53  Aligned_cols=181  Identities=17%  Similarity=0.165  Sum_probs=139.0

Q ss_pred             chhhHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHHH
Q 028523            2 PGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAAL   81 (208)
Q Consensus         2 ~~~tA~~~l~~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~~   81 (208)
                      +++|||+++ +.+++++|++|||+|+ |++|++++|+|+..|++|++++ ++++.++++ ++|++.+++     + .+. 
T Consensus       127 ~~~ta~~al-~~~~~~~g~~VlV~Ga-G~vG~~a~qlak~~Ga~Vi~~~-~~~~~~~~~-~lGa~~v~~-----d-~~~-  195 (315)
T 3goh_A          127 PLLTAWQAF-EKIPLTKQREVLIVGF-GAVNNLLTQMLNNAGYVVDLVS-ASLSQALAA-KRGVRHLYR-----E-PSQ-  195 (315)
T ss_dssp             HHHHHHHHH-TTSCCCSCCEEEEECC-SHHHHHHHHHHHHHTCEEEEEC-SSCCHHHHH-HHTEEEEES-----S-GGG-
T ss_pred             HHHHHHHHH-hhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEE-ChhhHHHHH-HcCCCEEEc-----C-HHH-
Confidence            578999999 8899999999999999 9999999999999999999999 999999999 899998883     2 122 


Q ss_pred             HhHCCCCccEEEeCCCchhHHHHHHhhccCCEEEEEecccccCCCCCCCccchHHHhhcceeEEEeecccc-----cc--
Q 028523           82 KRYFPEGINIYFENVGGKMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCLISKRIRMEGFLVPDY-----FH--  154 (208)
Q Consensus        82 ~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~--  154 (208)
                        . ++++|++|||+|++.+..++++|+++|+++.+|.....         .....+.+++.+....+...     +.  
T Consensus       196 --v-~~g~Dvv~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  263 (315)
T 3goh_A          196 --V-TQKYFAIFDAVNSQNAAALVPSLKANGHIICIQDRIPA---------PIDPAFTRTISYHEIALGALHDFGDRQDW  263 (315)
T ss_dssp             --C-CSCEEEEECC-------TTGGGEEEEEEEEEECCC-------------------CCSEEEEECGGGHHHHCCHHHH
T ss_pred             --h-CCCccEEEECCCchhHHHHHHHhcCCCEEEEEeCCCCc---------cccchhhhcceeeEEEeecccccCChhHH
Confidence              2 44899999999988788999999999999999764310         11123344555555544322     11  


Q ss_pred             -chHHHHHHHHHHHHCCCceeeeeeeecCCcHHHHHHHHhcCCccceEEEEecC
Q 028523          155 -LYPKFLEMMIPRIKEGKIVYVEDKAEGLESAPAALVGLFSGRNVGKQVVEVAT  207 (208)
Q Consensus       155 -~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~~~  207 (208)
                       ...+.++++++++++|++++.++++|+++++++|++.+.  +..||+|+++++
T Consensus       264 ~~~~~~~~~~~~l~~~g~l~~~i~~~~~l~~~~~A~~~~~--~~~gKvvi~~~~  315 (315)
T 3goh_A          264 QILMQQGEALLTLIAQGKMEIAAPDIFRFEQMIEALDHSE--QTKLKTVLTLNE  315 (315)
T ss_dssp             HHHHHHHHHHHHHHHTTSSCCCCCEEEEGGGHHHHHHHHH--HHCCCEEEESCC
T ss_pred             HHHHHHHHHHHHHHHCCCcccccceEecHHHHHHHHHHHH--hcCCcEEEEecC
Confidence             334568899999999999999999999999999999998  667999999874

>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*

Probab=99.96  E-value=4.5e-28  Score=188.84  Aligned_cols=187  Identities=18%  Similarity=0.170  Sum_probs=157.5

Q ss_pred             chhhHHHHHHHhcCCC-CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHH
Q 028523            2 PGMTAYAGFFEVCSPK-QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAA   80 (208)
Q Consensus         2 ~~~tA~~~l~~~~~~~-~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~   80 (208)
                      +++|||+++.+ .+++ +|++|||+|+ |++|++++|+|+..|++|+++++++++.+.+++++|++.++|+++.    +.
T Consensus       171 ~~~ta~~al~~-~~~~~~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~lGa~~v~~~~~~----~~  244 (366)
T 1yqd_A          171 AGITVYSPLKY-FGLDEPGKHIGIVGL-GGLGHVAVKFAKAFGSKVTVISTSPSKKEEALKNFGADSFLVSRDQ----EQ  244 (366)
T ss_dssp             HHHHHHHHHHH-TTCCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCGGGHHHHHHTSCCSEEEETTCH----HH
T ss_pred             hHHHHHHHHHh-cCcCCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcCCceEEeccCH----HH
Confidence            46799999965 5788 9999999996 9999999999999999999999999998887668999999998753    34


Q ss_pred             HHhHCCCCccEEEeCCCc-hhHHHHHHhhccCCEEEEEecccccCCCCCCCccchHHHhhcceeEEEeeccccccchHHH
Q 028523           81 LKRYFPEGINIYFENVGG-KMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCLISKRIRMEGFLVPDYFHLYPKF  159 (208)
Q Consensus        81 ~~~~~~~~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (208)
                      +++.++ ++|++||++|+ ..+..++++|+++|+++.+|...+      ....+...++.+++++.++....     .+.
T Consensus       245 ~~~~~~-~~D~vid~~g~~~~~~~~~~~l~~~G~iv~~g~~~~------~~~~~~~~~~~~~~~i~g~~~~~-----~~~  312 (366)
T 1yqd_A          245 MQAAAG-TLDGIIDTVSAVHPLLPLFGLLKSHGKLILVGAPEK------PLELPAFSLIAGRKIVAGSGIGG-----MKE  312 (366)
T ss_dssp             HHHTTT-CEEEEEECCSSCCCSHHHHHHEEEEEEEEECCCCSS------CEEECHHHHHTTTCEEEECCSCC-----HHH
T ss_pred             HHHhhC-CCCEEEECCCcHHHHHHHHHHHhcCCEEEEEccCCC------CCCcCHHHHHhCCcEEEEecCCC-----HHH
Confidence            555543 79999999996 478999999999999999987542      12345567788999999877644     566


Q ss_pred             HHHHHHHHHCCCceeeeeeeecCCcHHHHHHHHhcCCccceEEEEecC
Q 028523          160 LEMMIPRIKEGKIVYVEDKAEGLESAPAALVGLFSGRNVGKQVVEVAT  207 (208)
Q Consensus       160 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~~~  207 (208)
                      ++++++++.+|.+++.+ ++|+++++++|++.+.+++..||+|+++++
T Consensus       313 ~~~~~~l~~~g~l~~~~-~~~~l~~~~~A~~~~~~~~~~gKvvl~~~~  359 (366)
T 1yqd_A          313 TQEMIDFAAKHNITADI-EVISTDYLNTAMERLAKNDVRYRFVIDVGN  359 (366)
T ss_dssp             HHHHHHHHHHTTCCCCE-EEECGGGHHHHHHHHHTTCCSSEEEECHHH
T ss_pred             HHHHHHHHHcCCCCCce-EEEcHHHHHHHHHHHHcCCcceEEEEEccc
Confidence            88999999999999876 689999999999999999888999998753

>3iup_A Putative NADPH:quinone oxidoreductase; YP_296108.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE NDP; 1.70A {Ralstonia eutropha}

Probab=99.96  E-value=2.3e-29  Score=196.93  Aligned_cols=194  Identities=18%  Similarity=0.192  Sum_probs=159.5

Q ss_pred             chhhHHHHHHHhcCCCCCCEEEEec-CCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHH
Q 028523            2 PGMTAYAGFFEVCSPKQGEYVFVSA-ASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAA   80 (208)
Q Consensus         2 ~~~tA~~~l~~~~~~~~g~~vli~g-a~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~   80 (208)
                      +++|||+++.. +. ++|++|||+| |+|++|++++|+|+..|++|+++++++++.++++ ++|+++++|+++. ++.+.
T Consensus       156 ~~~ta~~~~~~-~~-~~g~~vlV~gag~G~vG~~a~q~a~~~Ga~Vi~~~~~~~~~~~~~-~lGa~~~~~~~~~-~~~~~  231 (379)
T 3iup_A          156 NPLTALGMVET-MR-LEGHSALVHTAAASNLGQMLNQICLKDGIKLVNIVRKQEQADLLK-AQGAVHVCNAASP-TFMQD  231 (379)
T ss_dssp             HHHHHHHHHHH-HH-HTTCSCEEESSTTSHHHHHHHHHHHHHTCCEEEEESSHHHHHHHH-HTTCSCEEETTST-THHHH
T ss_pred             hHHHHHHHHHH-hc-cCCCEEEEECCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-hCCCcEEEeCCCh-HHHHH
Confidence            36789988755 44 8999999996 7899999999999999999999999999999999 9999999999987 89999


Q ss_pred             HHhHCCC-CccEEEeCCCc-hhHHHHHHhhc-----cC-----------CEEEEEecccccCCCCCCCccchHHHhhcce
Q 028523           81 LKRYFPE-GINIYFENVGG-KMLDAVLLNMR-----IQ-----------GRITLCGMISQYNNDKPEGVHNLTCLISKRI  142 (208)
Q Consensus        81 ~~~~~~~-~~d~v~d~~g~-~~~~~~~~~l~-----~~-----------G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~  142 (208)
                      +++.+++ ++|++|||+|+ ..+..++++++     ++           |+++.+|.....       ..+....+.+++
T Consensus       232 v~~~t~~~g~d~v~d~~g~~~~~~~~~~~l~~~~~r~~G~~~~~G~~~~g~iv~~G~~~~~-------~~~~~~~~~~~~  304 (379)
T 3iup_A          232 LTEALVSTGATIAFDATGGGKLGGQILTCMEAALNKSAREYSRYGSTTHKQVYLYGGLDTS-------PTEFNRNFGMAW  304 (379)
T ss_dssp             HHHHHHHHCCCEEEESCEEESHHHHHHHHHHHHHHTTCCSCCTTCCCSCEEEEECCCSEEE-------EEEECCCSCSCE
T ss_pred             HHHHhcCCCceEEEECCCchhhHHHHHHhcchhhhccccceeecccccCceEEEecCCCCC-------ccccccccccce
Confidence            9998887 99999999996 46688888885     34           666666553321       112234466889


Q ss_pred             eEEEeecccc-----ccchHHHHHHHHHHHHCCCceeeeeeeecCCcH--HHHHHHHhcCCccceEEEEecC
Q 028523          143 RMEGFLVPDY-----FHLYPKFLEMMIPRIKEGKIVYVEDKAEGLESA--PAALVGLFSGRNVGKQVVEVAT  207 (208)
Q Consensus       143 ~~~~~~~~~~-----~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~--~~a~~~~~~~~~~gk~vv~~~~  207 (208)
                      ++.|+....+     +....+.++++.+++.+ .+++.++++|+++++  ++|++.+.+++..||+||+++.
T Consensus       305 ~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~i~~~~~l~~~~~~~A~~~l~~~~~~gKvVv~~~~  375 (379)
T 3iup_A          305 GMGGWLLFPFLQKIGRERANALKQRVVAELKT-TFASHYSKEISLAEVLDLDMIAVYNKRATGEKYLINPNK  375 (379)
T ss_dssp             EEEECCHHHHHHHHCHHHHHHHHHHHHHTTTT-TTCCCCSEEEEHHHHTCHHHHHHHTTCCTTCCEEEETTT
T ss_pred             EEEEEEeeeecccCCHHHHHHHHHHHHHHHhc-cCCCcceEEecHHHhhhHHHHHHHhcCCCCceEEEeCCC
Confidence            9999887654     33345667888888888 588999999999999  9999999999999999999875

>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}

Probab=99.96  E-value=2.5e-28  Score=190.94  Aligned_cols=195  Identities=23%  Similarity=0.289  Sum_probs=151.6

Q ss_pred             chhhHHHHHHHhcC----CCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeEecCCCccH
Q 028523            2 PGMTAYAGFFEVCS----PKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDL   77 (208)
Q Consensus         2 ~~~tA~~~l~~~~~----~~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~   77 (208)
                      +++|||+++.+.++    +++|++|||+||+|++|++++|+|+..|++|++++ ++++.+.++ ++|++.++|+++. ++
T Consensus       163 ~~~tA~~al~~~~~~~~~~~~g~~VlV~Ga~G~vG~~~~qla~~~Ga~Vi~~~-~~~~~~~~~-~lGa~~v~~~~~~-~~  239 (375)
T 2vn8_A          163 VALTAWSAINKVGGLNDKNCTGKRVLILGASGGVGTFAIQVMKAWDAHVTAVC-SQDASELVR-KLGADDVIDYKSG-SV  239 (375)
T ss_dssp             HHHHHHHHHTTTTCCCTTTCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEE-CGGGHHHHH-HTTCSEEEETTSS-CH
T ss_pred             HHHHHHHHHHHhcccccccCCCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEe-ChHHHHHHH-HcCCCEEEECCch-HH
Confidence            46799999987788    99999999999999999999999999999999998 778889998 9999999999876 77


Q ss_pred             HHHHHhHCCCCccEEEeCCCch--hHHHHHHhhccCCEEEEEecccccCCCCCCCccch----HHHhh-------cceeE
Q 028523           78 DAALKRYFPEGINIYFENVGGK--MLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNL----TCLIS-------KRIRM  144 (208)
Q Consensus        78 ~~~~~~~~~~~~d~v~d~~g~~--~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~----~~~~~-------~~~~~  144 (208)
                      .+.+.+.  +++|++|||+|++  .+..++++++++|+++.+|................    ..++.       ++..+
T Consensus       240 ~~~~~~~--~g~D~vid~~g~~~~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~  317 (375)
T 2vn8_A          240 EEQLKSL--KPFDFILDNVGGSTETWAPDFLKKWSGATYVTLVTPFLLNMDRLGIADGMLQTGVTVGSKALKHFWKGVHY  317 (375)
T ss_dssp             HHHHHTS--CCBSEEEESSCTTHHHHGGGGBCSSSCCEEEESCCSHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCEE
T ss_pred             HHHHhhc--CCCCEEEECCCChhhhhHHHHHhhcCCcEEEEeCCCcccccccccccchhheeehhhccccccccccCcce
Confidence            7777653  3799999999976  45888999999999999986432100000000000    11222       22233


Q ss_pred             EEeeccccccchHHHHHHHHHHHHCCCceeeeeeeecCCcHHHHHHHHhcCCccceEEEEe
Q 028523          145 EGFLVPDYFHLYPKFLEMMIPRIKEGKIVYVEDKAEGLESAPAALVGLFSGRNVGKQVVEV  205 (208)
Q Consensus       145 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~  205 (208)
                      .....    ....+.++++++++++|++++.++++|+++++++|++.+.+++..||+||++
T Consensus       318 ~~~~~----~~~~~~~~~~~~l~~~g~l~~~i~~~~~l~~~~~A~~~~~~~~~~gKvvi~~  374 (375)
T 2vn8_A          318 RWAFF----MASGPCLDDIAELVDAGKIRPVIEQTFPFSKVPEAFLKVERGHARGKTVINV  374 (375)
T ss_dssp             EECCC----CCCHHHHHHHHHHHHTTSCCCCEEEEEEGGGHHHHHHHHHHCCCSSEEEEEC
T ss_pred             EEEEe----CCCHHHHHHHHHHHHCCCcccCcCeEECHHHHHHHHHHHHcCCCCCeEEEEe
Confidence            22211    1225678999999999999999999999999999999999998889999976

>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*

Probab=99.95  E-value=5.4e-28  Score=188.46  Aligned_cols=187  Identities=11%  Similarity=0.056  Sum_probs=154.9

Q ss_pred             chhhHHHHHH--H--hcCCC--C-------CCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCH---HHHHHHHHhcCC
Q 028523            2 PGMTAYAGFF--E--VCSPK--Q-------GEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSK---DKVDLLKNKFGF   65 (208)
Q Consensus         2 ~~~tA~~~l~--~--~~~~~--~-------g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~---~~~~~~~~~~g~   65 (208)
                      +++|||+++.  +  .++++  +       |++|||+|+ |++|++++|+++..|++|+++++++   ++.+.++ ++|+
T Consensus       151 ~~~ta~~al~~~~~~~~~~~~~~~~~~~~~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~~-~~ga  228 (366)
T 2cdc_A          151 PLADIEKSIEEILEVQKRVPVWTCDDGTLNCRKVLVVGT-GPIGVLFTLLFRTYGLEVWMANRREPTEVEQTVIE-ETKT  228 (366)
T ss_dssp             HHHHHHHHHHHHHHHGGGSSCCSCTTSSSTTCEEEEESC-HHHHHHHHHHHHHHTCEEEEEESSCCCHHHHHHHH-HHTC
T ss_pred             cHHHHHHHHHhhhhcccCccccccccccCCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCccchHHHHHHH-HhCC
Confidence            4679999997  4  67888  8       999999998 9999999999999999999999988   8888888 8999


Q ss_pred             CeeEecCCCccHHHHHHhHCCCCccEEEeCCCc-hhH-HHHHHhhccCCEEEEEecccccCCCCCCCccchHH---Hhhc
Q 028523           66 DEAFNYKEEPDLDAALKRYFPEGINIYFENVGG-KML-DAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTC---LISK  140 (208)
Q Consensus        66 ~~v~~~~~~~~~~~~~~~~~~~~~d~v~d~~g~-~~~-~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~---~~~~  140 (208)
                      +.+ | ++  ++.+.+++ +++++|++||++|+ ..+ ..++++|+++|+++.+|...+     .....+...   ++.+
T Consensus       229 ~~v-~-~~--~~~~~~~~-~~~~~d~vid~~g~~~~~~~~~~~~l~~~G~iv~~g~~~~-----~~~~~~~~~~~~~~~~  298 (366)
T 2cdc_A          229 NYY-N-SS--NGYDKLKD-SVGKFDVIIDATGADVNILGNVIPLLGRNGVLGLFGFSTS-----GSVPLDYKTLQEIVHT  298 (366)
T ss_dssp             EEE-E-CT--TCSHHHHH-HHCCEEEEEECCCCCTHHHHHHGGGEEEEEEEEECSCCCS-----CEEEEEHHHHHHHHHT
T ss_pred             cee-c-hH--HHHHHHHH-hCCCCCEEEECCCChHHHHHHHHHHHhcCCEEEEEecCCC-----CccccChhhhHHHHhc
Confidence            888 7 54  55555655 43589999999997 477 899999999999999987542     112344455   7889


Q ss_pred             ceeEEEeeccccccchHHHHHHHHHHHHCCC------ceeeeeeeecCCcHHHHHHH--HhcCCccceEEEEec
Q 028523          141 RIRMEGFLVPDYFHLYPKFLEMMIPRIKEGK------IVYVEDKAEGLESAPAALVG--LFSGRNVGKQVVEVA  206 (208)
Q Consensus       141 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~------~~~~~~~~~~~~~~~~a~~~--~~~~~~~gk~vv~~~  206 (208)
                      ++++.|+....     .+.++++++++++|.      +++.++++|+++++++|++.  ++ +...+|+||+++
T Consensus       299 ~~~i~g~~~~~-----~~~~~~~~~l~~~g~i~~~~~~~~~i~~~~~l~~~~~A~~~l~~~-~~~~gKvvi~~~  366 (366)
T 2cdc_A          299 NKTIIGLVNGQ-----KPHFQQAVVHLASWKTLYPKAAKMLITKTVSINDEKELLKVLREK-EHGEIKIRILWE  366 (366)
T ss_dssp             TCEEEECCCCC-----HHHHHHHHHHHHHHHHHSHHHHTTSEEEEEETTCHHHHHHHHHCC-CTTCCEEEEECC
T ss_pred             CcEEEEecCCC-----HHHHHHHHHHHHcCCCCcccchhhcEEEEEcHHHHHHHHHHHhhh-cCCceEEEEecC
Confidence            99999876543     567899999999999      55778889999999999999  55 566899999874

>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*

Probab=99.95  E-value=2.1e-27  Score=218.13  Aligned_cols=200  Identities=21%  Similarity=0.276  Sum_probs=169.7

Q ss_pred             chhhHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHh---cCCCeeEecCCCccHH
Q 028523            2 PGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNK---FGFDEAFNYKEEPDLD   78 (208)
Q Consensus         2 ~~~tA~~~l~~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~---~g~~~v~~~~~~~~~~   78 (208)
                      +++|||+++.+.+++++|++|||+||+|++|++++|+||+.|++|+++++++++.+++++.   +|++.++++++. ++.
T Consensus      1651 ~~~TA~~al~~~a~l~~Ge~VLI~gaaGgVG~aAiqlAk~~Ga~Viat~~s~~k~~~l~~~~~~lga~~v~~~~~~-~~~ 1729 (2512)
T 2vz8_A         1651 VYTTAYYSLVVRGRMQPGESVLIHSGSGGVGQAAIAIALSRGCRVFTTVGSAEKRAYLQARFPQLDETCFANSRDT-SFE 1729 (2512)
T ss_dssp             HHHHHHHHHTTTTCCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCTTCCSTTEEESSSS-HHH
T ss_pred             HHHHHHHHHHHHhcCCCCCEEEEEeCChHHHHHHHHHHHHcCCEEEEEeCChhhhHHHHhhcCCCCceEEecCCCH-HHH
Confidence            4789999998889999999999999999999999999999999999999999999999842   678889999887 888


Q ss_pred             HHHHhHCCC-CccEEEeCCCchhHHHHHHhhccCCEEEEEecccccCCCCCCCccchHHHhhcceeEEEeecccc----c
Q 028523           79 AALKRYFPE-GINIYFENVGGKMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCLISKRIRMEGFLVPDY----F  153 (208)
Q Consensus        79 ~~~~~~~~~-~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~  153 (208)
                      +.+++.+++ |+|+|||+++++.+..++++|+++|+++.+|......     ........+.+++++.++....+    +
T Consensus      1730 ~~i~~~t~g~GvDvVld~~g~~~l~~~l~~L~~~Gr~V~iG~~~~~~-----~~~~~~~~~~~~~~~~g~~l~~~~~~~~ 1804 (2512)
T 2vz8_A         1730 QHVLRHTAGKGVDLVLNSLAEEKLQASVRCLAQHGRFLEIGKFDLSN-----NHALGMAVFLKNVTFHGILLDSLFEEGG 1804 (2512)
T ss_dssp             HHHHHTTTSCCEEEEEECCCHHHHHHHHTTEEEEEEEEECCCHHHHT-----TCEEEGGGGGGCCEEEECCGGGTTSSCC
T ss_pred             HHHHHhcCCCCceEEEECCCchHHHHHHHhcCCCcEEEEeecccccc-----cCcccccccccCCcEEEeeHHHHhhhCH
Confidence            899988887 8999999999899999999999999999998653211     11123456778999999876543    2


Q ss_pred             cchHHHHHHHHHHHHCCCceeeeeeeecCCcHHHHHHHHhcCCccceEEEEecC
Q 028523          154 HLYPKFLEMMIPRIKEGKIVYVEDKAEGLESAPAALVGLFSGRNVGKQVVEVAT  207 (208)
Q Consensus       154 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~~~  207 (208)
                      ....+.++.+.+++.+|.+++.++++|+++++.+|++.+.+++..||+|+.+++
T Consensus      1805 ~~~~~~l~~l~~~~~~g~l~p~i~~~f~l~ei~eA~~~l~~g~~~GKvVi~~~~ 1858 (2512)
T 2vz8_A         1805 ATWQEVSELLKAGIQEGVVQPLKCTVFPRTKVEAAFRYMAQGKHIGKVVIQVRE 1858 (2512)
T ss_dssp             HHHHHHHHHHHHHHTTTCSCCCCEEEEESSTHHHHHHHHHTTCCSSEEEEECSC
T ss_pred             HHHHHHHHHHHHHHHcCCcCCCcceEecHHHHHHHHHhhhccCccceEEEECCC
Confidence            234556666667777899999999999999999999999999999999998864

>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1

Probab=99.93  E-value=1.8e-24  Score=154.89  Aligned_cols=171  Identities=20%  Similarity=0.329  Sum_probs=137.9

Q ss_pred             chhhHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHHH
Q 028523            2 PGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAAL   81 (208)
Q Consensus         2 ~~~tA~~~l~~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~~   81 (208)
                      +++|||+++.+.+++++|++|+|+||+|++|++++|+++..|++|+++++++++.+.++ ++|++.++|+.+. +..+.+
T Consensus        22 ~~~ta~~~l~~~~~~~~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~~-~~g~~~~~d~~~~-~~~~~~   99 (198)
T 1pqw_A           22 AYLTAWHSLCEVGRLSPGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKREMLS-RLGVEYVGDSRSV-DFADEI   99 (198)
T ss_dssp             HHHHHHHHHHTTSCCCTTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHH-TTCCSEEEETTCS-THHHHH
T ss_pred             HHHHHHHHHHHHhCCCCCCEEEEeeCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-HcCCCEEeeCCcH-HHHHHH
Confidence            56899999988889999999999999999999999999999999999999999888888 8999888898876 777788


Q ss_pred             HhHCCC-CccEEEeCCCchhHHHHHHhhccCCEEEEEecccccCCCCCCCccchHHHhhcceeEEEeeccc----cccch
Q 028523           82 KRYFPE-GINIYFENVGGKMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCLISKRIRMEGFLVPD----YFHLY  156 (208)
Q Consensus        82 ~~~~~~-~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~  156 (208)
                      .+.+.+ ++|++||+.|.+.+..++++|+++|+++.+|......    ....+. ..+.+++++.++....    .+...
T Consensus       100 ~~~~~~~~~D~vi~~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~----~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~  174 (198)
T 1pqw_A          100 LELTDGYGVDVVLNSLAGEAIQRGVQILAPGGRFIELGKKDVYA----DASLGL-AALAKSASFSVVDLDLNLKLQPARY  174 (198)
T ss_dssp             HHHTTTCCEEEEEECCCTHHHHHHHHTEEEEEEEEECSCGGGTT----TCEEEG-GGGTTTCEEEECCHHHHHHHCHHHH
T ss_pred             HHHhCCCCCeEEEECCchHHHHHHHHHhccCCEEEEEcCCCCcC----cCcCCh-hHhcCCcEEEEEehHHhhccCHHHH
Confidence            777765 8999999999889999999999999999998765211    111222 2456788887765411    11123


Q ss_pred             HHHHHHHHHHHHCCCceeeeeee
Q 028523          157 PKFLEMMIPRIKEGKIVYVEDKA  179 (208)
Q Consensus       157 ~~~~~~~~~~~~~g~~~~~~~~~  179 (208)
                      .+.++++++++++|+++|.+.++
T Consensus       175 ~~~~~~~~~l~~~g~l~~~~~~~  197 (198)
T 1pqw_A          175 RQLLQHILQHVADGKLEVLPVTA  197 (198)
T ss_dssp             HHHHHHHHHHHHTTSSCCCCCC-
T ss_pred             HHHHHHHHHHHHcCCccCCCCCc
Confidence            56789999999999999876544

>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A

Probab=99.26  E-value=4.6e-11  Score=92.62  Aligned_cols=145  Identities=12%  Similarity=0.020  Sum_probs=98.0

Q ss_pred             CCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCe--eEecCCCccHHHHHHhHCCCCccEEEeCC
Q 028523           19 GEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDE--AFNYKEEPDLDAALKRYFPEGINIYFENV   96 (208)
Q Consensus        19 g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~--v~~~~~~~~~~~~~~~~~~~~~d~v~d~~   96 (208)
                      +++|+|+|+ |++|+++++.++.+|++|+++++++++.+.++ +++...  +++++.. ++.+.+.     ++|++|+|+
T Consensus       167 ~~~VlViGa-GgvG~~aa~~a~~~Ga~V~v~dr~~~r~~~~~-~~~~~~~~~~~~~~~-~~~~~~~-----~~DvVI~~~  238 (361)
T 1pjc_A          167 PGKVVILGG-GVVGTEAAKMAVGLGAQVQIFDINVERLSYLE-TLFGSRVELLYSNSA-EIETAVA-----EADLLIGAV  238 (361)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-HHHGGGSEEEECCHH-HHHHHHH-----TCSEEEECC
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHH-HhhCceeEeeeCCHH-HHHHHHc-----CCCEEEECC
Confidence            489999997 99999999999999999999999999999888 555433  3443322 4444433     599999999


Q ss_pred             Cchh-------HHHHHHhhccCCEEEEEecccccCCCCC-CCccchHHHhhcceeEEEeecccc--c----cc-hHHHHH
Q 028523           97 GGKM-------LDAVLLNMRIQGRITLCGMISQYNNDKP-EGVHNLTCLISKRIRMEGFLVPDY--F----HL-YPKFLE  161 (208)
Q Consensus        97 g~~~-------~~~~~~~l~~~G~~v~~g~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~--~----~~-~~~~~~  161 (208)
                      +.+.       ....++.|+++|+++.++...+.+.... ....+......+++++.+......  +    .. ....++
T Consensus       239 ~~~~~~~~~li~~~~~~~~~~g~~ivdv~~~~gg~~e~~~~~~~~~~~~~~~~v~~~~~~~lp~~~~~~~s~~~~~~~~~  318 (361)
T 1pjc_A          239 LVPGRRAPILVPASLVEQMRTGSVIVDVAVDQGGCVETLHPTSHTQPTYEVFGVVHYGVPNMPGAVPWTATQALNNSTLP  318 (361)
T ss_dssp             CCTTSSCCCCBCHHHHTTSCTTCEEEETTCTTCCSBTTCCCCCSSSCEEEETTEEEECCSCGGGGCHHHHHHHHHHHHHH
T ss_pred             CcCCCCCCeecCHHHHhhCCCCCEEEEEecCCCCCCccccCCCCCCCEEEECCEEEEEeCCcchhhHHHHHHHHHHHHHH
Confidence            8432       6778899999999999987654221100 112222234456677666442111  1    11 134567


Q ss_pred             HHHHHHHCCC
Q 028523          162 MMIPRIKEGK  171 (208)
Q Consensus       162 ~~~~~~~~g~  171 (208)
                      .+.+++.+|.
T Consensus       319 ~l~~l~~~G~  328 (361)
T 1pjc_A          319 YVVKLANQGL  328 (361)
T ss_dssp             HHHHHHHHGG
T ss_pred             HHHHHHhCCc
Confidence            8888888773

>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*

Probab=99.20  E-value=2.6e-10  Score=88.81  Aligned_cols=99  Identities=18%  Similarity=0.141  Sum_probs=77.3

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHHHHhHCCCCccEEEeCCC
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVG   97 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~d~v~d~~g   97 (208)
                      +|++|+|+|+ |++|+.+++.++.+|++|+++++++++.+.+++.+|.....++....++.+.+.     ++|+|++|++
T Consensus       167 ~g~~V~ViG~-G~iG~~~a~~a~~~Ga~V~~~d~~~~~l~~~~~~~g~~~~~~~~~~~~l~~~l~-----~aDvVi~~~~  240 (377)
T 2vhw_A          167 EPADVVVIGA-GTAGYNAARIANGMGATVTVLDINIDKLRQLDAEFCGRIHTRYSSAYELEGAVK-----RADLVIGAVL  240 (377)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTTTSSEEEECCHHHHHHHHH-----HCSEEEECCC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHhcCCeeEeccCCHHHHHHHHc-----CCCEEEECCC
Confidence            5789999997 999999999999999999999999999888874478764333322213434333     4899999987


Q ss_pred             chh-------HHHHHHhhccCCEEEEEecccc
Q 028523           98 GKM-------LDAVLLNMRIQGRITLCGMISQ  122 (208)
Q Consensus        98 ~~~-------~~~~~~~l~~~G~~v~~g~~~~  122 (208)
                      .+.       ....++.|+++|.++.++...+
T Consensus       241 ~p~~~t~~li~~~~l~~mk~g~~iV~va~~~G  272 (377)
T 2vhw_A          241 VPGAKAPKLVSNSLVAHMKPGAVLVDIAIDQG  272 (377)
T ss_dssp             CTTSCCCCCBCHHHHTTSCTTCEEEEGGGGTT
T ss_pred             cCCCCCcceecHHHHhcCCCCcEEEEEecCCC
Confidence            432       6788999999999999986543

>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}

Probab=99.17  E-value=6e-10  Score=86.62  Aligned_cols=148  Identities=14%  Similarity=0.064  Sum_probs=92.4

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHHHHhHCCCCccEEEeCCC
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVG   97 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~d~v~d~~g   97 (208)
                      ++++|+|+|+ |++|+.+++.++..|++|+++++++++.+.+++.+|.....+..+..++.+.+.     ++|++++|++
T Consensus       165 ~~~~V~ViGa-G~iG~~~a~~l~~~Ga~V~~~d~~~~~~~~~~~~~g~~~~~~~~~~~~l~~~~~-----~~DvVi~~~g  238 (369)
T 2eez_A          165 APASVVILGG-GTVGTNAAKIALGMGAQVTILDVNHKRLQYLDDVFGGRVITLTATEANIKKSVQ-----HADLLIGAVL  238 (369)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTTTSEEEEECCHHHHHHHHH-----HCSEEEECCC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHhcCceEEEecCCHHHHHHHHh-----CCCEEEECCC
Confidence            4689999998 999999999999999999999999999888874577764333333213444333     4899999998


Q ss_pred             chh-------HHHHHHhhccCCEEEEEecccccCCCCC-CCccchHHHhhcceeEEEeecccc--cc-----chHHHHHH
Q 028523           98 GKM-------LDAVLLNMRIQGRITLCGMISQYNNDKP-EGVHNLTCLISKRIRMEGFLVPDY--FH-----LYPKFLEM  162 (208)
Q Consensus        98 ~~~-------~~~~~~~l~~~G~~v~~g~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~--~~-----~~~~~~~~  162 (208)
                      ...       ....++.|+++|.++.++...+...+.. +...+...+..+++++.+......  +.     ...+.++.
T Consensus       239 ~~~~~~~~li~~~~l~~mk~gg~iV~v~~~~gg~~d~~ep~~~~~~~~~~~~v~~~~v~~lp~~~p~~as~~~~~~~~~~  318 (369)
T 2eez_A          239 VPGAKAPKLVTRDMLSLMKEGAVIVDVAVDQGGCVETIRPTTHAEPTYVVDGVVHYGVANMPGAVPRTSTFALTNQTLPY  318 (369)
T ss_dssp             -------CCSCHHHHTTSCTTCEEEECC-------------------CEETTEEEECCSCSGGGSHHHHHHHHHHHHHHH
T ss_pred             CCccccchhHHHHHHHhhcCCCEEEEEecCCCCCCCcccCCCCCCCEEEECCEEEEeeCCcchhcHHHHHHHHHHHHHHH
Confidence            432       6788999999999999987653211000 011111223345666665442111  11     11345677


Q ss_pred             HHHHHHCCC
Q 028523          163 MIPRIKEGK  171 (208)
Q Consensus       163 ~~~~~~~g~  171 (208)
                      +.+++.+|.
T Consensus       319 l~~l~~~g~  327 (369)
T 2eez_A          319 VLKLAEKGL  327 (369)
T ss_dssp             HHHHHHHTT
T ss_pred             HHHHHhcCh
Confidence            888887774

>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*

Probab=99.03  E-value=1.1e-09  Score=85.48  Aligned_cols=125  Identities=14%  Similarity=0.125  Sum_probs=84.7

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCee-EecCC---------------C---ccHH
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEA-FNYKE---------------E---PDLD   78 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~v-~~~~~---------------~---~~~~   78 (208)
                      ++++|+|+|+ |++|+.++++++.+|++|+++++++++.+.++ ++|++.+ ++..+               .   ....
T Consensus       171 ~g~~V~ViGa-G~iG~~aa~~a~~~Ga~V~~~d~~~~~~~~~~-~~Ga~~~~i~~~~~~~~~~~~~~~~~~s~~~~~~~~  248 (384)
T 1l7d_A          171 PPARVLVFGV-GVAGLQAIATAKRLGAVVMATDVRAATKEQVE-SLGGKFITVDDEAMKTAETAGGYAKEMGEEFRKKQA  248 (384)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCSTTHHHHH-HTTCEECCC-----------------------CCHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HcCCeEEeecccccccccccccchhhcCHHHHhhhH
Confidence            6899999995 99999999999999999999999999888888 7998654 23311               0   0011


Q ss_pred             HHHHhHCCCCccEEEeCC---Cch---h-HHHHHHhhccCCEEEEEecccccCCCCCCCccchHHHhhcceeEEEee
Q 028523           79 AALKRYFPEGINIYFENV---GGK---M-LDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCLISKRIRMEGFL  148 (208)
Q Consensus        79 ~~~~~~~~~~~d~v~d~~---g~~---~-~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  148 (208)
                      +.+.+... ++|+||+|+   |.+   . ....++.|++++.++.++...+.....   ..+......+++++.+..
T Consensus       249 ~~l~~~~~-~aDvVi~~~~~pg~~~~~li~~~~l~~mk~g~vivdva~~~gg~~~~---~~~~~~~~~~~v~i~g~~  321 (384)
T 1l7d_A          249 EAVLKELV-KTDIAITTALIPGKPAPVLITEEMVTKMKPGSVIIDLAVEAGGNCPL---SEPGKIVVKHGVKIVGHT  321 (384)
T ss_dssp             HHHHHHHT-TCSEEEECCCCTTSCCCCCSCHHHHTTSCTTCEEEETTGGGTCSSTT---CCTTCEEEETTEEEECCS
T ss_pred             HHHHHHhC-CCCEEEECCccCCCCCCeeeCHHHHhcCCCCCEEEEEecCCCCCeec---ccCCcEEEECCEEEEEeC
Confidence            22333333 599999999   532   2 378899999999999998754321111   111122345667777654

>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*

Probab=98.95  E-value=7.5e-09  Score=82.74  Aligned_cols=104  Identities=16%  Similarity=0.157  Sum_probs=81.9

Q ss_pred             hhHHHHHHHhc-CCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHHHH
Q 028523            4 MTAYAGFFEVC-SPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALK   82 (208)
Q Consensus         4 ~tA~~~l~~~~-~~~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~   82 (208)
                      .++|+++.+.. ...+|++|+|.|. |.+|..++|.++.+|++|+++++++.+.+.++ ++|++ ++      ++.+.+.
T Consensus       258 ~s~~~g~~r~~~~~l~GktV~IiG~-G~IG~~~A~~lka~Ga~Viv~d~~~~~~~~A~-~~Ga~-~~------~l~e~l~  328 (494)
T 3ce6_A          258 HSLIDGINRGTDALIGGKKVLICGY-GDVGKGCAEAMKGQGARVSVTEIDPINALQAM-MEGFD-VV------TVEEAIG  328 (494)
T ss_dssp             HHHHHHHHHHHCCCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHH-HTTCE-EC------CHHHHGG
T ss_pred             hhhhHHHHhccCCCCCcCEEEEEcc-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HcCCE-Ee------cHHHHHh
Confidence            35667764432 2789999999995 99999999999999999999999999888888 88875 22      3333221


Q ss_pred             hHCCCCccEEEeCCCc-hhHH-HHHHhhccCCEEEEEeccc
Q 028523           83 RYFPEGINIYFENVGG-KMLD-AVLLNMRIQGRITLCGMIS  121 (208)
Q Consensus        83 ~~~~~~~d~v~d~~g~-~~~~-~~~~~l~~~G~~v~~g~~~  121 (208)
                           ++|+|+++++. ..+. ..++.|+++|+++.+|...
T Consensus       329 -----~aDvVi~atgt~~~i~~~~l~~mk~ggilvnvG~~~  364 (494)
T 3ce6_A          329 -----DADIVVTATGNKDIIMLEHIKAMKDHAILGNIGHFD  364 (494)
T ss_dssp             -----GCSEEEECSSSSCSBCHHHHHHSCTTCEEEECSSSG
T ss_pred             -----CCCEEEECCCCHHHHHHHHHHhcCCCcEEEEeCCCC
Confidence                 58999999995 4454 7889999999999998743

>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}

Probab=98.87  E-value=1e-08  Score=76.19  Aligned_cols=105  Identities=17%  Similarity=0.233  Sum_probs=79.0

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCe---eEecCCCccHHHHHHhHCC--CCccEE
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDE---AFNYKEEPDLDAALKRYFP--EGINIY   92 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~---v~~~~~~~~~~~~~~~~~~--~~~d~v   92 (208)
                      +|+.+||+||++|+|.+.++.+...|++|+++++++++.+.+.+++|...   ..|..+.++..+.+.+...  +++|++
T Consensus        28 ~gKvalVTGas~GIG~aiA~~la~~Ga~V~i~~r~~~~l~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iDiL  107 (273)
T 4fgs_A           28 NAKIAVITGATSGIGLAAAKRFVAEGARVFITGRRKDVLDAAIAEIGGGAVGIQADSANLAELDRLYEKVKAEAGRIDVL  107 (273)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTCEEEECCTTCHHHHHHHHHHHHHHHSCEEEE
T ss_pred             CCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcCCCeEEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            68999999999999999999999999999999999999888776887643   2344444233333333322  369999


Q ss_pred             EeCCCc-h-------------------------hHHHHHHhhccCCEEEEEecccc
Q 028523           93 FENVGG-K-------------------------MLDAVLLNMRIQGRITLCGMISQ  122 (208)
Q Consensus        93 ~d~~g~-~-------------------------~~~~~~~~l~~~G~~v~~g~~~~  122 (208)
                      +++.|. .                         ..+.+++.|+++|+++.+++..+
T Consensus       108 VNNAG~~~~~~~~~~~~e~w~~~~~vNl~g~~~~~~~~~p~m~~~G~IInisS~~~  163 (273)
T 4fgs_A          108 FVNAGGGSMLPLGEVTEEQYDDTFDRNVKGVLFTVQKALPLLARGSSVVLTGSTAG  163 (273)
T ss_dssp             EECCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEECCGGG
T ss_pred             EECCCCCCCCChhhccHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCeEEEEeehhh
Confidence            999873 2                         03556778888999999987665

>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*

Probab=98.85  E-value=2.2e-08  Score=78.54  Aligned_cols=125  Identities=14%  Similarity=0.107  Sum_probs=82.9

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCee-EecCC------------CccH----HHH
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEA-FNYKE------------EPDL----DAA   80 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~v-~~~~~------------~~~~----~~~   80 (208)
                      ++++|+|+|+ |.+|+.++++++.+|++|+++++++++.+.++ ++|+..+ ++..+            ..++    .+.
T Consensus       171 ~g~~V~ViGa-G~iG~~aa~~a~~~Ga~V~v~D~~~~~~~~~~-~lGa~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~  248 (401)
T 1x13_A          171 PPAKVMVIGA-GVAGLAAIGAANSLGAIVRAFDTRPEVKEQVQ-SMGAEFLELDFKEEAGSGDGYAKVMSDAFIKAEMEL  248 (401)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCGGGHHHHH-HTTCEECCC--------CCHHHHHHSHHHHHHHHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHH-HcCCEEEEecccccccccccchhhccHHHHHHHHHH
Confidence            5789999996 99999999999999999999999999988887 8888643 12110            0011    011


Q ss_pred             HHhHCCCCccEEEeCCCc------hh-HHHHHHhhccCCEEEEEecccccCCCCCCCccchH-HHhhcceeEEEee
Q 028523           81 LKRYFPEGINIYFENVGG------KM-LDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLT-CLISKRIRMEGFL  148 (208)
Q Consensus        81 ~~~~~~~~~d~v~d~~g~------~~-~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~  148 (208)
                      +.+... ++|+||++++.      .. ...+++.|++++.++.++...+.+.+.   ..... ....+++++.+..
T Consensus       249 l~e~~~-~aDvVI~~~~~pg~~ap~li~~~~l~~mk~g~vIVdva~~~Gg~v~~---~~~~~p~~~~~gv~i~g~~  320 (401)
T 1x13_A          249 FAAQAK-EVDIIVTTALIPGKPAPKLITREMVDSMKAGSVIVDLAAQNGGNCEY---TVPGEIFTTENGVKVIGYT  320 (401)
T ss_dssp             HHHHHH-HCSEEEECCCCTTSCCCCCBCHHHHHTSCTTCEEEETTGGGTCSBTT---CCTTSEEECTTSCEEECCS
T ss_pred             HHHHhC-CCCEEEECCccCCCCCCeeeCHHHHhcCCCCcEEEEEcCCCCCCcCc---ccCCCceEEECCEEEEeeC
Confidence            222222 48999999521      12 368899999999999998754321111   11111 1345677777754

>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}

Probab=98.74  E-value=1.4e-08  Score=68.32  Aligned_cols=108  Identities=10%  Similarity=0.083  Sum_probs=78.6

Q ss_pred             chhhHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHHH
Q 028523            2 PGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAAL   81 (208)
Q Consensus         2 ~~~tA~~~l~~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~~   81 (208)
                      +..++++++.. .....+.+|+|+|+ |.+|...++.++..|++|++.++++++.+.+.+++|.. +..+.   ++.+.+
T Consensus         5 ~~sv~~~a~~~-~~~~~~~~v~iiG~-G~iG~~~a~~l~~~g~~v~v~~r~~~~~~~~a~~~~~~-~~~~~---~~~~~~   78 (144)
T 3oj0_A            5 KVSIPSIVYDI-VRKNGGNKILLVGN-GMLASEIAPYFSYPQYKVTVAGRNIDHVRAFAEKYEYE-YVLIN---DIDSLI   78 (144)
T ss_dssp             CCSHHHHHHHH-HHHHCCCEEEEECC-SHHHHHHGGGCCTTTCEEEEEESCHHHHHHHHHHHTCE-EEECS---CHHHHH
T ss_pred             cccHHHHHHHH-HHhccCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEcCCHHHHHHHHHHhCCc-eEeec---CHHHHh
Confidence            46778888854 44455999999995 99999999988888999999999999887765578753 22232   444444


Q ss_pred             HhHCCCCccEEEeCCCchhHHHHHHhhccCCEEEEEecc
Q 028523           82 KRYFPEGINIYFENVGGKMLDAVLLNMRIQGRITLCGMI  120 (208)
Q Consensus        82 ~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~  120 (208)
                      .     ++|+|+++++..........+++++.++.++.+
T Consensus        79 ~-----~~Divi~at~~~~~~~~~~~l~~g~~vid~~~p  112 (144)
T 3oj0_A           79 K-----NNDVIITATSSKTPIVEERSLMPGKLFIDLGNP  112 (144)
T ss_dssp             H-----TCSEEEECSCCSSCSBCGGGCCTTCEEEECCSS
T ss_pred             c-----CCCEEEEeCCCCCcEeeHHHcCCCCEEEEccCC
Confidence            3     489999999953211122678889999888764

>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1

Probab=98.71  E-value=8.5e-08  Score=75.38  Aligned_cols=109  Identities=14%  Similarity=0.141  Sum_probs=76.5

Q ss_pred             chhhHHHHHHHhc---CCCCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCHHHH-HHHHHhcCCCeeEecCCCcc
Q 028523            2 PGMTAYAGFFEVC---SPKQGEYVFVSAASGAVGQLVGQFAKLVGC-YVVGSAGSKDKV-DLLKNKFGFDEAFNYKEEPD   76 (208)
Q Consensus         2 ~~~tA~~~l~~~~---~~~~g~~vli~ga~g~vG~~a~qla~~~g~-~v~~~~~s~~~~-~~~~~~~g~~~v~~~~~~~~   76 (208)
                      ++.++|.++....   .-.+|++|+|+|+ |++|.++++.++..|+ +|+++.+++++. +.++ ++|++ ++++.   +
T Consensus       147 ~~s~a~~av~~a~~~~~~l~g~~VlIiGa-G~iG~~~a~~l~~~G~~~V~v~~r~~~ra~~la~-~~g~~-~~~~~---~  220 (404)
T 1gpj_A          147 AVSIGSAAVELAERELGSLHDKTVLVVGA-GEMGKTVAKSLVDRGVRAVLVANRTYERAVELAR-DLGGE-AVRFD---E  220 (404)
T ss_dssp             CCSHHHHHHHHHHHHHSCCTTCEEEEESC-CHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHH-HHTCE-ECCGG---G
T ss_pred             CccHHHHHHHHHHHHhccccCCEEEEECh-HHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHH-HcCCc-eecHH---h
Confidence            3457787774322   1258999999996 9999999999999999 999999999887 4555 88875 33332   4


Q ss_pred             HHHHHHhHCCCCccEEEeCCCch-hH--HHHHHh--h--ccCCEEEEEeccc
Q 028523           77 LDAALKRYFPEGINIYFENVGGK-ML--DAVLLN--M--RIQGRITLCGMIS  121 (208)
Q Consensus        77 ~~~~~~~~~~~~~d~v~d~~g~~-~~--~~~~~~--l--~~~G~~v~~g~~~  121 (208)
                      +.+.+.     ++|+|++|++.. .+  ...+..  +  +++|.++.++...
T Consensus       221 l~~~l~-----~aDvVi~at~~~~~~~~~~~l~~~~lk~r~~~~~v~vdia~  267 (404)
T 1gpj_A          221 LVDHLA-----RSDVVVSATAAPHPVIHVDDVREALRKRDRRSPILIIDIAN  267 (404)
T ss_dssp             HHHHHH-----TCSEEEECCSSSSCCBCHHHHHHHHHHCSSCCCEEEEECCS
T ss_pred             HHHHhc-----CCCEEEEccCCCCceecHHHHHHHHHhccCCCCEEEEEccC
Confidence            444332     589999999843 22  244555  4  5577777776643

>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A

Probab=98.67  E-value=9.5e-08  Score=70.47  Aligned_cols=106  Identities=13%  Similarity=0.146  Sum_probs=74.1

Q ss_pred             CCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCe---eEecCCCccHHHHHHhHCC--CCccE
Q 028523           17 KQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDE---AFNYKEEPDLDAALKRYFP--EGINI   91 (208)
Q Consensus        17 ~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~---v~~~~~~~~~~~~~~~~~~--~~~d~   91 (208)
                      -.|+++||+||++++|.+.++.+...|++|+++++++++.+.+.++++...   ..|..+.+++...+.+...  +++|+
T Consensus         6 l~gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~   85 (255)
T 4eso_A            6 YQGKKAIVIGGTHGMGLATVRRLVEGGAEVLLTGRNESNIARIREEFGPRVHALRSDIADLNEIAVLGAAAGQTLGAIDL   85 (255)
T ss_dssp             TTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHHSSEEE
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCcceEEEccCCCHHHHHHHHHHHHHHhCCCCE
Confidence            357899999999999999999998999999999999998887765665432   2344443223333332211  36999


Q ss_pred             EEeCCCc-h-------------------------hHHHHHHhhccCCEEEEEecccc
Q 028523           92 YFENVGG-K-------------------------MLDAVLLNMRIQGRITLCGMISQ  122 (208)
Q Consensus        92 v~d~~g~-~-------------------------~~~~~~~~l~~~G~~v~~g~~~~  122 (208)
                      ++++.|. .                         ..+.+++.|+++|+++.+++...
T Consensus        86 lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS~~~  142 (255)
T 4eso_A           86 LHINAGVSELEPFDQVSEASYDRQFAVNTKGAFFTVQRLTPLIREGGSIVFTSSVAD  142 (255)
T ss_dssp             EEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCGGG
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCEEEEECChhh
Confidence            9998872 1                         02334455667899999987654

>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}

Probab=98.63  E-value=3.1e-07  Score=67.54  Aligned_cols=105  Identities=18%  Similarity=0.229  Sum_probs=73.7

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHh---cCCCe---eEecCCCccHHHHHHhHCC--CCc
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNK---FGFDE---AFNYKEEPDLDAALKRYFP--EGI   89 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~---~g~~~---v~~~~~~~~~~~~~~~~~~--~~~   89 (208)
                      +|+.+||+||++++|.+.++.+...|++|+++++++++.+.+.++   .|...   ..|..+.++..+.+.+...  +++
T Consensus         8 ~gKvalVTGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~l~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~i   87 (255)
T 4g81_D            8 TGKTALVTGSARGLGFAYAEGLAAAGARVILNDIRATLLAESVDTLTRKGYDAHGVAFDVTDELAIEAAFSKLDAEGIHV   87 (255)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHHHHHTTCCC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHCCCC
Confidence            589999999999999999999999999999999998876655433   34332   2344444234444444332  379


Q ss_pred             cEEEeCCCc-hh-------------------------HHHHHHhhc---cCCEEEEEecccc
Q 028523           90 NIYFENVGG-KM-------------------------LDAVLLNMR---IQGRITLCGMISQ  122 (208)
Q Consensus        90 d~v~d~~g~-~~-------------------------~~~~~~~l~---~~G~~v~~g~~~~  122 (208)
                      |+++++.|. ..                         .+.+++.|.   .+|+++.+++..+
T Consensus        88 DiLVNNAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~~G~IVnisS~~~  149 (255)
T 4g81_D           88 DILINNAGIQYRKPMVELELENWQKVIDTNLTSAFLVSRSAAKRMIARNSGGKIINIGSLTS  149 (255)
T ss_dssp             CEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGG
T ss_pred             cEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHccCCCEEEEEeehhh
Confidence            999999873 20                         244566662   3689999987765

>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}

Probab=98.58  E-value=1.5e-07  Score=72.76  Aligned_cols=105  Identities=15%  Similarity=0.087  Sum_probs=76.3

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeE-ecC-C-CccH------------HHHHH
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAF-NYK-E-EPDL------------DAALK   82 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~v~-~~~-~-~~~~------------~~~~~   82 (208)
                      ++.+|+|+|+ |.+|+.+++.++.+|++|++.++++++.+.++ ++|++.+- +.. + ...+            .+.+.
T Consensus       183 ~~~kV~ViG~-G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~~-~lGa~~~~l~~~~~~~~gya~~~~~~~~~~~~~~l~  260 (381)
T 3p2y_A          183 KPASALVLGV-GVAGLQALATAKRLGAKTTGYDVRPEVAEQVR-SVGAQWLDLGIDAAGEGGYARELSEAERAQQQQALE  260 (381)
T ss_dssp             CCCEEEEESC-SHHHHHHHHHHHHHTCEEEEECSSGGGHHHHH-HTTCEECCCC-------------CHHHHHHHHHHHH
T ss_pred             CCCEEEEECc-hHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HcCCeEEeccccccccccchhhhhHHHHhhhHHHHH
Confidence            6789999996 99999999999999999999999999999998 78875321 100 0 0001            11222


Q ss_pred             hHCCCCccEEEeCCC--c---h--hHHHHHHhhccCCEEEEEecccccCC
Q 028523           83 RYFPEGINIYFENVG--G---K--MLDAVLLNMRIQGRITLCGMISQYNN  125 (208)
Q Consensus        83 ~~~~~~~d~v~d~~g--~---~--~~~~~~~~l~~~G~~v~~g~~~~~~~  125 (208)
                      +... .+|+||.++.  +   +  .-...++.|++++.++.++...+.+.
T Consensus       261 e~l~-~aDIVI~tv~iPg~~ap~Lvt~emv~~MkpGsVIVDvA~d~GG~~  309 (381)
T 3p2y_A          261 DAIT-KFDIVITTALVPGRPAPRLVTAAAATGMQPGSVVVDLAGETGGNC  309 (381)
T ss_dssp             HHHT-TCSEEEECCCCTTSCCCCCBCHHHHHTSCTTCEEEETTGGGTCSB
T ss_pred             HHHh-cCCEEEECCCCCCcccceeecHHHHhcCCCCcEEEEEeCCCCCcc
Confidence            2222 5999999863  1   1  24789999999999999998776543

>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*

Probab=98.58  E-value=6.5e-07  Score=65.53  Aligned_cols=104  Identities=11%  Similarity=0.001  Sum_probs=71.6

Q ss_pred             CCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCe--eEecCCCccHHHHHHhHCC--CCccEEEe
Q 028523           19 GEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDE--AFNYKEEPDLDAALKRYFP--EGINIYFE   94 (208)
Q Consensus        19 g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~--v~~~~~~~~~~~~~~~~~~--~~~d~v~d   94 (208)
                      +++|||+||++++|.+.++.+...|++|+++++++++.+.+.++.+...  ..|..+.++..+.+.+...  +++|++++
T Consensus         2 nK~vlVTGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~v~~~~~~~g~iDiLVN   81 (247)
T 3ged_A            2 NRGVIVTGGGHGIGKQICLDFLEAGDKVCFIDIDEKRSADFAKERPNLFYFHGDVADPLTLKKFVEYAMEKLQRIDVLVN   81 (247)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHTTCTTEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEE
T ss_pred             CCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcCCEEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence            3689999999999999999999999999999999988887773433222  2344443233333333322  36999999


Q ss_pred             CCCc-h--h-----------------------HHHHHHhh-ccCCEEEEEecccc
Q 028523           95 NVGG-K--M-----------------------LDAVLLNM-RIQGRITLCGMISQ  122 (208)
Q Consensus        95 ~~g~-~--~-----------------------~~~~~~~l-~~~G~~v~~g~~~~  122 (208)
                      +.|. .  .                       .+.+++.| +.+|+++.+++..+
T Consensus        82 NAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~~G~IInisS~~~  136 (247)
T 3ged_A           82 NACRGSKGILSSLLYEEFDYILSVGLKAPYELSRLCRDELIKNKGRIINIASTRA  136 (247)
T ss_dssp             CCCCCCCCGGGTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEECCGGG
T ss_pred             CCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCcEEEEeeccc
Confidence            8862 1  0                       23344455 44799999987765

>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A

Probab=98.57  E-value=5.7e-07  Score=66.72  Aligned_cols=80  Identities=23%  Similarity=0.353  Sum_probs=58.8

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCe---eEecCCCccHHHHHHhHCC--CCccEE
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDE---AFNYKEEPDLDAALKRYFP--EGINIY   92 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~---v~~~~~~~~~~~~~~~~~~--~~~d~v   92 (208)
                      .|+++||+||++++|.+.++.+...|++|+++++++++.+.+.++++...   ..|..+..++.+.+.+...  +++|++
T Consensus        26 ~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~l  105 (266)
T 3grp_A           26 TGRKALVTGATGGIGEAIARCFHAQGAIVGLHGTREDKLKEIAADLGKDVFVFSANLSDRKSIKQLAEVAEREMEGIDIL  105 (266)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCSSEEEEECCTTSHHHHHHHHHHHHHHHTSCCEE
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceEEEEeecCCHHHHHHHHHHHHHHcCCCCEE
Confidence            57899999999999999999999999999999999988777665776543   2344443233333332221  369999


Q ss_pred             EeCCC
Q 028523           93 FENVG   97 (208)
Q Consensus        93 ~d~~g   97 (208)
                      +++.|
T Consensus       106 vnnAg  110 (266)
T 3grp_A          106 VNNAG  110 (266)
T ss_dssp             EECCC
T ss_pred             EECCC
Confidence            99988

>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}

Probab=98.56  E-value=3.7e-07  Score=71.08  Aligned_cols=104  Identities=15%  Similarity=0.154  Sum_probs=75.0

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCee-Ee------------cCC--CccH----H
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEA-FN------------YKE--EPDL----D   78 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~v-~~------------~~~--~~~~----~   78 (208)
                      ++.+|+|+|+ |.+|+.++++++.+|++|++.++++++.+.++ ++|++.+ ++            |..  .+.+    .
T Consensus       189 ~~~kV~ViG~-G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~~-~~G~~~~~~~~~~~~d~~~~~~ya~e~s~~~~~~~~  266 (405)
T 4dio_A          189 PAAKIFVMGA-GVAGLQAIATARRLGAVVSATDVRPAAKEQVA-SLGAKFIAVEDEEFKAAETAGGYAKEMSGEYQVKQA  266 (405)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSTTHHHHHH-HTTCEECCCCC-----------------CHHHHHHH
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHH-HcCCceeecccccccccccccchhhhcchhhhhhhH
Confidence            5789999996 99999999999999999999999999999998 7887532 11            110  0001    1


Q ss_pred             HHHHhHCCCCccEEEeCCC--c---h--hHHHHHHhhccCCEEEEEecccccC
Q 028523           79 AALKRYFPEGINIYFENVG--G---K--MLDAVLLNMRIQGRITLCGMISQYN  124 (208)
Q Consensus        79 ~~~~~~~~~~~d~v~d~~g--~---~--~~~~~~~~l~~~G~~v~~g~~~~~~  124 (208)
                      ..+.+... +.|+||.|+.  +   +  .-..+++.|++|+.++.++...+.+
T Consensus       267 ~~l~e~l~-~aDVVI~tvlipg~~ap~Lvt~emv~~Mk~GsVIVDvA~d~GG~  318 (405)
T 4dio_A          267 ALVAEHIA-KQDIVITTALIPGRPAPRLVTREMLDSMKPGSVVVDLAVERGGN  318 (405)
T ss_dssp             HHHHHHHH-TCSEEEECCCCSSSCCCCCBCHHHHTTSCTTCEEEETTGGGTCS
T ss_pred             hHHHHHhc-CCCEEEECCcCCCCCCCEEecHHHHhcCCCCCEEEEEeCCCCCC
Confidence            11222111 5899999853  1   1  3478999999999999998766543

>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2

Probab=98.55  E-value=8.6e-07  Score=65.63  Aligned_cols=105  Identities=10%  Similarity=0.129  Sum_probs=71.2

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCe---eEecCCCccHHHHHHhHCC--CCccEE
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDE---AFNYKEEPDLDAALKRYFP--EGINIY   92 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~---v~~~~~~~~~~~~~~~~~~--~~~d~v   92 (208)
                      .+.+++|+||+|++|.+.++.+...|++|+++++++++.+.+.++++...   ..|..+.+++.+.+.+...  +++|++
T Consensus         5 ~~k~vlITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~iD~l   84 (263)
T 2a4k_A            5 SGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAALEAEAIAVVADVSDPKAVEAVFAEALEEFGRLHGV   84 (263)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTCCSSEEEEECCTTSHHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCceEEEEcCCCCHHHHHHHHHHHHHHcCCCcEE
Confidence            46889999999999999999998899999999999988777664664321   2344443233333333221  269999


Q ss_pred             EeCCCc-h----------h---------------HHHHHHhhccCCEEEEEecccc
Q 028523           93 FENVGG-K----------M---------------LDAVLLNMRIQGRITLCGMISQ  122 (208)
Q Consensus        93 ~d~~g~-~----------~---------------~~~~~~~l~~~G~~v~~g~~~~  122 (208)
                      |++.|. .          .               .+.+++.|+.+|+++.+++...
T Consensus        85 vnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~  140 (263)
T 2a4k_A           85 AHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVLEEGGSLVLTGSVAG  140 (263)
T ss_dssp             EEGGGGTTTTC----CHHHHHHHHHHHHHHHHHHHHHHHHHCCTTCEEEEECCCTT
T ss_pred             EECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEecchh
Confidence            998872 1          0               1233444433799999987653

>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}

Probab=98.55  E-value=5.7e-07  Score=67.12  Aligned_cols=105  Identities=20%  Similarity=0.256  Sum_probs=72.8

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCe---eEecCCCccHHHHHHhHCC--CCccEE
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDE---AFNYKEEPDLDAALKRYFP--EGINIY   92 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~---v~~~~~~~~~~~~~~~~~~--~~~d~v   92 (208)
                      .|.++||+||++++|.+.++.+...|++|+++++++++.+.+.++++...   ..|..+.++..+.+.+...  +++|++
T Consensus        28 ~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~l  107 (277)
T 3gvc_A           28 AGKVAIVTGAGAGIGLAVARRLADEGCHVLCADIDGDAADAAATKIGCGAAACRVDVSDEQQIIAMVDACVAAFGGVDKL  107 (277)
T ss_dssp             TTCEEEETTTTSTHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHCSSCEEEECCTTCHHHHHHHHHHHHHHHSSCCEE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCcceEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            57899999999999999999888899999999999988877765666432   2344443233333333221  269999


Q ss_pred             EeCCCc-h----------h---------------HHHHHHhh--ccCCEEEEEecccc
Q 028523           93 FENVGG-K----------M---------------LDAVLLNM--RIQGRITLCGMISQ  122 (208)
Q Consensus        93 ~d~~g~-~----------~---------------~~~~~~~l--~~~G~~v~~g~~~~  122 (208)
                      +++.|. .          .               .+.+++.|  +.+|+++.+++...
T Consensus       108 vnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~  165 (277)
T 3gvc_A          108 VANAGVVHLASLIDTTVEDFDRVIAINLRGAWLCTKHAAPRMIERGGGAIVNLSSLAG  165 (277)
T ss_dssp             EECCCCCCCBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCGGG
T ss_pred             EECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcchhh
Confidence            999873 1          0               23344445  34689999987654

>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}

Probab=98.55  E-value=5.1e-07  Score=67.19  Aligned_cols=106  Identities=20%  Similarity=0.227  Sum_probs=72.2

Q ss_pred             CCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCe---eEecCCCccHHHHHHhHCC--CCccE
Q 028523           17 KQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDE---AFNYKEEPDLDAALKRYFP--EGINI   91 (208)
Q Consensus        17 ~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~---v~~~~~~~~~~~~~~~~~~--~~~d~   91 (208)
                      ..+.++||+||++++|.+.++.+...|++|+++++++++.+.+.++++...   ..|..+.+++.+.+.+...  +++|+
T Consensus        26 ~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~  105 (272)
T 4dyv_A           26 TGKKIAIVTGAGSGVGRAVAVALAGAGYGVALAGRRLDALQETAAEIGDDALCVPTDVTDPDSVRALFTATVEKFGRVDV  105 (272)
T ss_dssp             --CCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTSCCEEEECCTTSHHHHHHHHHHHHHHHSCCCE
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence            357899999999999999999988899999999999988877765665422   2344443233333333221  26999


Q ss_pred             EEeCCCc--h--h-----------------------HHHHHHhhcc----CCEEEEEecccc
Q 028523           92 YFENVGG--K--M-----------------------LDAVLLNMRI----QGRITLCGMISQ  122 (208)
Q Consensus        92 v~d~~g~--~--~-----------------------~~~~~~~l~~----~G~~v~~g~~~~  122 (208)
                      ++++.|.  .  .                       .+.+++.|..    +|+++.++....
T Consensus       106 lVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~g~IV~isS~~~  167 (272)
T 4dyv_A          106 LFNNAGTGAPAIPMEDLTFAQWKQVVDTNLTGPFLCTQEAFRVMKAQEPRGGRIINNGSISA  167 (272)
T ss_dssp             EEECCCCCCCSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSSCCEEEEEECCSST
T ss_pred             EEECCCCCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCCCCcEEEEECchhh
Confidence            9999872  1  0                       2334455543    589999987654

>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A

Probab=98.52  E-value=8.7e-07  Score=65.34  Aligned_cols=105  Identities=9%  Similarity=0.081  Sum_probs=71.0

Q ss_pred             CCCEEEEecCCc--hHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH---hcCCCe----eEecCCCccHHHHHHhHCC--
Q 028523           18 QGEYVFVSAASG--AVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKN---KFGFDE----AFNYKEEPDLDAALKRYFP--   86 (208)
Q Consensus        18 ~g~~vli~ga~g--~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~---~~g~~~----v~~~~~~~~~~~~~~~~~~--   86 (208)
                      +|+++||+||+|  |+|.+.++.+...|++|+++.++++..+.+.+   +++...    ..|..+.++..+.+.+...  
T Consensus         5 ~gK~alVTGaa~~~GIG~aiA~~la~~Ga~Vvi~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   84 (256)
T 4fs3_A            5 ENKTYVIMGIANKRSIAFGVAKVLDQLGAKLVFTYRKERSRKELEKLLEQLNQPEAHLYQIDVQSDEEVINGFEQIGKDV   84 (256)
T ss_dssp             TTCEEEEECCCSTTCHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHGGGTCSSCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCcEEEEEccCCCHHHHHHHHHHHHHHh
Confidence            589999999876  89999999999999999999999877665543   334322    2344443233333333222  


Q ss_pred             CCccEEEeCCCc-h--------------h---------------HHHHHHhhccCCEEEEEecccc
Q 028523           87 EGINIYFENVGG-K--------------M---------------LDAVLLNMRIQGRITLCGMISQ  122 (208)
Q Consensus        87 ~~~d~v~d~~g~-~--------------~---------------~~~~~~~l~~~G~~v~~g~~~~  122 (208)
                      +++|+++++.|. .              .               .......++.+|+++.+++..+
T Consensus        85 G~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~G~IVnisS~~~  150 (256)
T 4fs3_A           85 GNIDGVYHSIAFANMEDLRGRFSETSREGFLLAQDISSYSLTIVAHEAKKLMPEGGSIVATTYLGG  150 (256)
T ss_dssp             CCCSEEEECCCCCCGGGGTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCTTCEEEEEEECGGG
T ss_pred             CCCCEEEeccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCEEEEEecccc
Confidence            369999998762 1              0               1223445677899999987664

>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}

Probab=98.52  E-value=3.9e-07  Score=68.16  Aligned_cols=80  Identities=18%  Similarity=0.245  Sum_probs=55.2

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhc----CCC-e--eEecCCCccHHHHHHhHCC--CC
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKF----GFD-E--AFNYKEEPDLDAALKRYFP--EG   88 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~----g~~-~--v~~~~~~~~~~~~~~~~~~--~~   88 (208)
                      .|+++||+||++++|.+.++.+...|++|+++++++++.+.+.+++    +.. .  ..|..+.+++.+.+.+...  ++
T Consensus        32 ~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~  111 (281)
T 4dry_A           32 EGRIALVTGGGTGVGRGIAQALSAEGYSVVITGRRPDVLDAAAGEIGGRTGNIVRAVVCDVGDPDQVAALFAAVRAEFAR  111 (281)
T ss_dssp             --CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCeEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            5789999999999999999998889999999999988766654333    211 2  2355444233333333222  36


Q ss_pred             ccEEEeCCC
Q 028523           89 INIYFENVG   97 (208)
Q Consensus        89 ~d~v~d~~g   97 (208)
                      +|+++++.|
T Consensus       112 iD~lvnnAG  120 (281)
T 4dry_A          112 LDLLVNNAG  120 (281)
T ss_dssp             CSEEEECCC
T ss_pred             CCEEEECCC
Confidence            999999987

>4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1}

Probab=98.51  E-value=1.6e-07  Score=68.39  Aligned_cols=104  Identities=15%  Similarity=0.191  Sum_probs=71.2

Q ss_pred             CCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCC-CeeEecCCCccHHHHHHhHCCCCccEEEe
Q 028523           16 PKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGF-DEAFNYKEEPDLDAALKRYFPEGINIYFE   94 (208)
Q Consensus        16 ~~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~-~~v~~~~~~~~~~~~~~~~~~~~~d~v~d   94 (208)
                      +-+|+++||+||++++|.+.++.+...|++|+++++++++.+... .-.. ....|..+.+++.+.+.+ . +++|++++
T Consensus         8 lf~GK~alVTGas~GIG~aia~~la~~Ga~Vv~~~~~~~~~~~~~-~~~~~~~~~Dv~~~~~v~~~~~~-~-g~iDiLVN   84 (242)
T 4b79_A            8 IYAGQQVLVTGGSSGIGAAIAMQFAELGAEVVALGLDADGVHAPR-HPRIRREELDITDSQRLQRLFEA-L-PRLDVLVN   84 (242)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTSTTSCC-CTTEEEEECCTTCHHHHHHHHHH-C-SCCSEEEE
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHhhhh-cCCeEEEEecCCCHHHHHHHHHh-c-CCCCEEEE
Confidence            347999999999999999999999999999999999877654322 1111 113455544233333333 2 36999999


Q ss_pred             CCC-chh-----------------------HHHHHHhhc-cCCEEEEEecccc
Q 028523           95 NVG-GKM-----------------------LDAVLLNMR-IQGRITLCGMISQ  122 (208)
Q Consensus        95 ~~g-~~~-----------------------~~~~~~~l~-~~G~~v~~g~~~~  122 (208)
                      +.| ...                       .+.+++.|+ .+|++|.+++..+
T Consensus        85 NAGi~~~~~~~~~~~w~~~~~vNl~g~~~~~~~~~p~m~~~~G~IVnisS~~~  137 (242)
T 4b79_A           85 NAGISRDREEYDLATFERVLRLNLSAAMLASQLARPLLAQRGGSILNIASMYS  137 (242)
T ss_dssp             CCCCCCGGGGGSHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCEEEEEECCGGG
T ss_pred             CCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEeeccc
Confidence            987 221                       234556665 4899999987765

>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}

Probab=98.50  E-value=9.6e-07  Score=65.43  Aligned_cols=105  Identities=18%  Similarity=0.304  Sum_probs=70.7

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhc---CCCe---eEecCCCccHHHHHHhHCC--CCc
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKF---GFDE---AFNYKEEPDLDAALKRYFP--EGI   89 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~---g~~~---v~~~~~~~~~~~~~~~~~~--~~~   89 (208)
                      .++++||+||++++|.+.++.+...|++|+++++++++.+.+.+++   |...   ..|..+..++.+.+.+...  +++
T Consensus         3 ~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i   82 (264)
T 3tfo_A            3 MDKVILITGASGGIGEGIARELGVAGAKILLGARRQARIEAIATEIRDAGGTALAQVLDVTDRHSVAAFAQAAVDTWGRI   82 (264)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            4678999999999999999999899999999999988776655343   4322   2344443233333333222  369


Q ss_pred             cEEEeCCCc-h----------h---------------HHHHHHhhc--cCCEEEEEecccc
Q 028523           90 NIYFENVGG-K----------M---------------LDAVLLNMR--IQGRITLCGMISQ  122 (208)
Q Consensus        90 d~v~d~~g~-~----------~---------------~~~~~~~l~--~~G~~v~~g~~~~  122 (208)
                      |+++++.|. .          .               .+.+++.|.  .+|+++.+++...
T Consensus        83 D~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~~~  143 (264)
T 3tfo_A           83 DVLVNNAGVMPLSPLAAVKVDEWERMIDVNIKGVLWGIGAVLPIMEAQRSGQIINIGSIGA  143 (264)
T ss_dssp             CEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGG
T ss_pred             CEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCeEEEEEcCHHH
Confidence            999999872 1          0               123444443  4689999987654

>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}

Probab=98.48  E-value=1.5e-06  Score=55.93  Aligned_cols=93  Identities=15%  Similarity=0.161  Sum_probs=64.2

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcC-CEEEEEeCCHHHHHHHHHhcCCCe-eEecCCCccHHHHHHhHCCCCccEEEeC
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVG-CYVVGSAGSKDKVDLLKNKFGFDE-AFNYKEEPDLDAALKRYFPEGINIYFEN   95 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g-~~v~~~~~s~~~~~~~~~~~g~~~-v~~~~~~~~~~~~~~~~~~~~~d~v~d~   95 (208)
                      .+.+|+|+|+ |.+|..+++.+...| .+|+++++++++.+.+. ..+... ..|..+.    +.+.+... ++|+||++
T Consensus         4 ~~~~v~I~G~-G~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~-~~~~~~~~~d~~~~----~~~~~~~~-~~d~vi~~   76 (118)
T 3ic5_A            4 MRWNICVVGA-GKIGQMIAALLKTSSNYSVTVADHDLAALAVLN-RMGVATKQVDAKDE----AGLAKALG-GFDAVISA   76 (118)
T ss_dssp             TCEEEEEECC-SHHHHHHHHHHHHCSSEEEEEEESCHHHHHHHH-TTTCEEEECCTTCH----HHHHHHTT-TCSEEEEC
T ss_pred             CcCeEEEECC-CHHHHHHHHHHHhCCCceEEEEeCCHHHHHHHH-hCCCcEEEecCCCH----HHHHHHHc-CCCEEEEC
Confidence            3568999998 999999999999999 79999999999888887 666543 2333322    23333332 59999999


Q ss_pred             CCchhHHHHHHh-hccCCEEEEE
Q 028523           96 VGGKMLDAVLLN-MRIQGRITLC  117 (208)
Q Consensus        96 ~g~~~~~~~~~~-l~~~G~~v~~  117 (208)
                      ++.......... ...+..++.+
T Consensus        77 ~~~~~~~~~~~~~~~~g~~~~~~   99 (118)
T 3ic5_A           77 APFFLTPIIAKAAKAAGAHYFDL   99 (118)
T ss_dssp             SCGGGHHHHHHHHHHTTCEEECC
T ss_pred             CCchhhHHHHHHHHHhCCCEEEe
Confidence            985544444443 4445555443

>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}

Probab=98.46  E-value=1.5e-06  Score=65.58  Aligned_cols=80  Identities=19%  Similarity=0.311  Sum_probs=57.3

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhc---CCCe---eEecCCCccHHHHHHhHCC--CCc
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKF---GFDE---AFNYKEEPDLDAALKRYFP--EGI   89 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~---g~~~---v~~~~~~~~~~~~~~~~~~--~~~   89 (208)
                      .|.++||+||+|++|...++.+...|++|+++++++++.+.+.+++   +...   ..|..+.+.+.+.+.+...  +++
T Consensus        30 ~gk~vlVTGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i  109 (301)
T 3tjr_A           30 DGRAAVVTGGASGIGLATATEFARRGARLVLSDVDQPALEQAVNGLRGQGFDAHGVVCDVRHLDEMVRLADEAFRLLGGV  109 (301)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSSC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhCCCC
Confidence            5789999999999999999999899999999999998876654333   3322   2454443233333333221  269


Q ss_pred             cEEEeCCC
Q 028523           90 NIYFENVG   97 (208)
Q Consensus        90 d~v~d~~g   97 (208)
                      |++|++.|
T Consensus       110 d~lvnnAg  117 (301)
T 3tjr_A          110 DVVFSNAG  117 (301)
T ss_dssp             SEEEECCC
T ss_pred             CEEEECCC
Confidence            99999987

>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*

Probab=98.46  E-value=6.7e-07  Score=65.58  Aligned_cols=80  Identities=18%  Similarity=0.242  Sum_probs=58.9

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCe---eEecCCCccHHHHHHhHCC--CCccEE
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDE---AFNYKEEPDLDAALKRYFP--EGINIY   92 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~---v~~~~~~~~~~~~~~~~~~--~~~d~v   92 (208)
                      +|+++||+||++++|.+.++.+...|++|+++++++++.+.+.++++...   ..|..+.+++.+.+.+...  +++|++
T Consensus         5 ~gk~vlVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~l   84 (247)
T 3rwb_A            5 AGKTALVTGAAQGIGKAIAARLAADGATVIVSDINAEGAKAAAASIGKKARAIAADISDPGSVKALFAEIQALTGGIDIL   84 (247)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHCTTEEECCCCTTCHHHHHHHHHHHHHHHSCCSEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHHCCCCCEE
Confidence            57899999999999999999999999999999999988877665676532   2344443233333333221  269999


Q ss_pred             EeCCC
Q 028523           93 FENVG   97 (208)
Q Consensus        93 ~d~~g   97 (208)
                      +++.|
T Consensus        85 v~nAg   89 (247)
T 3rwb_A           85 VNNAS   89 (247)
T ss_dssp             EECCC
T ss_pred             EECCC
Confidence            99987

>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*

Probab=98.44  E-value=1.9e-06  Score=64.45  Aligned_cols=104  Identities=21%  Similarity=0.299  Sum_probs=68.2

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHH-HHH----HHHhcCCCe---eEecCCCccHHHHHHhHCC--C
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDK-VDL----LKNKFGFDE---AFNYKEEPDLDAALKRYFP--E   87 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~-~~~----~~~~~g~~~---v~~~~~~~~~~~~~~~~~~--~   87 (208)
                      ++.++||+||+|++|.+.++.+...|++|++++++.++ .+.    ++ +.|...   ..|..+..++...+.+...  +
T Consensus        28 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g  106 (283)
T 1g0o_A           28 EGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIK-KNGSDAACVKANVGVVEDIVRMFEEAVKIFG  106 (283)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHH-HTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHH-HhCCCeEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            47899999999999999999998899999999987643 222    23 345432   2344433223333332221  3


Q ss_pred             CccEEEeCCCch--------------------------hHHHHHHhhccCCEEEEEecccc
Q 028523           88 GINIYFENVGGK--------------------------MLDAVLLNMRIQGRITLCGMISQ  122 (208)
Q Consensus        88 ~~d~v~d~~g~~--------------------------~~~~~~~~l~~~G~~v~~g~~~~  122 (208)
                      ++|++|++.|..                          ..+.+++.|+.+|+++.+++..+
T Consensus       107 ~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~  167 (283)
T 1g0o_A          107 KLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIGGRLILMGSITG  167 (283)
T ss_dssp             CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTTCEEEEECCGGG
T ss_pred             CCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCeEEEEechhh
Confidence            699999998721                          02345556666799999987654

>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*

Probab=98.44  E-value=1.2e-06  Score=65.59  Aligned_cols=100  Identities=13%  Similarity=0.093  Sum_probs=72.6

Q ss_pred             hcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHh---cCCCeeEecCCCccHHHHHHhHCCCCc
Q 028523           13 VCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNK---FGFDEAFNYKEEPDLDAALKRYFPEGI   89 (208)
Q Consensus        13 ~~~~~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~---~g~~~v~~~~~~~~~~~~~~~~~~~~~   89 (208)
                      .+++++|++||..| +|+.|..++.+++..|++|++++.+++..+.+++.   .|.+.+ ..... +..+    +.++.|
T Consensus       117 la~l~~g~rVLDIG-cG~G~~ta~~lA~~~ga~V~gIDis~~~l~~Ar~~~~~~gl~~v-~~v~g-Da~~----l~d~~F  189 (298)
T 3fpf_A          117 LGRFRRGERAVFIG-GGPLPLTGILLSHVYGMRVNVVEIEPDIAELSRKVIEGLGVDGV-NVITG-DETV----IDGLEF  189 (298)
T ss_dssp             HTTCCTTCEEEEEC-CCSSCHHHHHHHHTTCCEEEEEESSHHHHHHHHHHHHHHTCCSE-EEEES-CGGG----GGGCCC
T ss_pred             HcCCCCcCEEEEEC-CCccHHHHHHHHHccCCEEEEEECCHHHHHHHHHHHHhcCCCCe-EEEEC-chhh----CCCCCc
Confidence            46899999999999 47767777888888899999999999988877742   354221 11112 2211    223479


Q ss_pred             cEEEeCCCc----hhHHHHHHhhccCCEEEEEec
Q 028523           90 NIYFENVGG----KMLDAVLLNMRIQGRITLCGM  119 (208)
Q Consensus        90 d~v~d~~g~----~~~~~~~~~l~~~G~~v~~g~  119 (208)
                      |+|+.....    ..+..+.+.|+|||+++....
T Consensus       190 DvV~~~a~~~d~~~~l~el~r~LkPGG~Lvv~~~  223 (298)
T 3fpf_A          190 DVLMVAALAEPKRRVFRNIHRYVDTETRIIYRTY  223 (298)
T ss_dssp             SEEEECTTCSCHHHHHHHHHHHCCTTCEEEEEEC
T ss_pred             CEEEECCCccCHHHHHHHHHHHcCCCcEEEEEcC
Confidence            999975542    368899999999999987654

>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix}

Probab=98.44  E-value=1.7e-06  Score=63.89  Aligned_cols=105  Identities=20%  Similarity=0.264  Sum_probs=69.8

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhc-----CCC-e--eEecCCCccHHHHHHhHCCC-C
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKF-----GFD-E--AFNYKEEPDLDAALKRYFPE-G   88 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~-----g~~-~--v~~~~~~~~~~~~~~~~~~~-~   88 (208)
                      .+.++||+||+|++|...++.+...|++|+++++++++.+.+.+++     +.. .  ..|..+.+.+.+.+.+.... +
T Consensus         6 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g   85 (260)
T 2z1n_A            6 QGKLAVVTAGSSGLGFASALELARNGARLLLFSRNREKLEAAASRIASLVSGAQVDIVAGDIREPGDIDRLFEKARDLGG   85 (260)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHHHTTC
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEEccCCCHHHHHHHHHHHHHhcC
Confidence            4689999999999999999988889999999999988766554333     312 2  23444432333334333222 4


Q ss_pred             ccEEEeCCCc-h----------h---------------HHHHHHhhcc--CCEEEEEecccc
Q 028523           89 INIYFENVGG-K----------M---------------LDAVLLNMRI--QGRITLCGMISQ  122 (208)
Q Consensus        89 ~d~v~d~~g~-~----------~---------------~~~~~~~l~~--~G~~v~~g~~~~  122 (208)
                      +|++|++.|. .          .               .+.+++.|..  .|+++.+++...
T Consensus        86 id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~  147 (260)
T 2z1n_A           86 ADILVYSTGGPRPGRFMELGVEDWDESYRLLARSAVWVGRRAAEQMVEKGWGRMVYIGSVTL  147 (260)
T ss_dssp             CSEEEECCCCCCCBCGGGCCHHHHHHHHHHTHHHHHHHHHHHHHHHHHHTCEEEEEECCGGG
T ss_pred             CCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECchhh
Confidence            9999999872 1          0               1344445533  489999987654

>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=98.43  E-value=9.3e-07  Score=64.71  Aligned_cols=80  Identities=9%  Similarity=0.172  Sum_probs=57.8

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCe-eEecCCCccHHHHHHhHCC--CCccEEEe
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDE-AFNYKEEPDLDAALKRYFP--EGINIYFE   94 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~-v~~~~~~~~~~~~~~~~~~--~~~d~v~d   94 (208)
                      .+.+++|+||+|++|...++.+...|++|+++++++++.+.+.+++|... ..|..+.+.+.+.+.+...  +++|++|+
T Consensus         4 ~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lvn   83 (245)
T 1uls_A            4 KDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAVGAHPVVMDVADPASVERGFAEALAHLGRLDGVVH   83 (245)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTTCEEEECCTTCHHHHHHHHHHHHHHHSSCCEEEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence            46789999999999999999988899999999999888777664666322 2354443233333333221  26999999


Q ss_pred             CCC
Q 028523           95 NVG   97 (208)
Q Consensus        95 ~~g   97 (208)
                      +.|
T Consensus        84 ~Ag   86 (245)
T 1uls_A           84 YAG   86 (245)
T ss_dssp             CCC
T ss_pred             CCC
Confidence            987

>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}

Probab=98.43  E-value=1.1e-06  Score=64.61  Aligned_cols=105  Identities=20%  Similarity=0.285  Sum_probs=73.8

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHh---cCCCe---eEecCCCccHHHHHHhHCC--CCc
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNK---FGFDE---AFNYKEEPDLDAALKRYFP--EGI   89 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~---~g~~~---v~~~~~~~~~~~~~~~~~~--~~~   89 (208)
                      +|+.+||+||++++|.+.++.+...|++|+.+++++++.+.+.++   .|...   ..|..+.++..+.+.+...  +++
T Consensus         6 ~gKvalVTGas~GIG~aiA~~la~~Ga~Vv~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~G~i   85 (254)
T 4fn4_A            6 KNKVVIVTGAGSGIGRAIAKKFALNDSIVVAVELLEDRLNQIVQELRGMGKEVLGVKADVSKKKDVEEFVRRTFETYSRI   85 (254)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            588999999999999999999989999999999999887665543   45432   3455544233333333322  369


Q ss_pred             cEEEeCCC-c-h--h-----------------------HHHHHHhhcc--CCEEEEEecccc
Q 028523           90 NIYFENVG-G-K--M-----------------------LDAVLLNMRI--QGRITLCGMISQ  122 (208)
Q Consensus        90 d~v~d~~g-~-~--~-----------------------~~~~~~~l~~--~G~~v~~g~~~~  122 (208)
                      |+++++.| . .  .                       .+.+++.|.+  +|++|.+++..+
T Consensus        86 DiLVNNAGi~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IVnisS~~g  147 (254)
T 4fn4_A           86 DVLCNNAGIMDGVTPVAEVSDELWERVLAVNLYSAFYSSRAVIPIMLKQGKGVIVNTASIAG  147 (254)
T ss_dssp             CEEEECCCCCCTTCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGG
T ss_pred             CEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEechhh
Confidence            99999887 2 1  0                       2455666643  699999987765

>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2

Probab=98.42  E-value=2.9e-06  Score=62.82  Aligned_cols=105  Identities=16%  Similarity=0.137  Sum_probs=69.0

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCC-----C-e--eEecCCCccHHHHHHhHCC--C
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGF-----D-E--AFNYKEEPDLDAALKRYFP--E   87 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~-----~-~--v~~~~~~~~~~~~~~~~~~--~   87 (208)
                      .+.+++|+||+|++|...++.+...|++|+++++++++.+.+.+++..     . .  ..|..+.+++.+.+.....  +
T Consensus         6 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g   85 (267)
T 2gdz_A            6 NGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVDHFG   85 (267)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhcCCCceEEEecCCCCHHHHHHHHHHHHHHcC
Confidence            578999999999999999999988999999999998776554333321     1 1  2344443233333333211  2


Q ss_pred             CccEEEeCCCc---hhH---------------HHHHHhhcc-----CCEEEEEecccc
Q 028523           88 GINIYFENVGG---KML---------------DAVLLNMRI-----QGRITLCGMISQ  122 (208)
Q Consensus        88 ~~d~v~d~~g~---~~~---------------~~~~~~l~~-----~G~~v~~g~~~~  122 (208)
                      ++|+++++.|.   +.+               ..+++.|..     .|+++.+++...
T Consensus        86 ~id~lv~~Ag~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~  143 (267)
T 2gdz_A           86 RLDILVNNAGVNNEKNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAG  143 (267)
T ss_dssp             CCCEEEECCCCCCSSSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGG
T ss_pred             CCCEEEECCCCCChhhHHHHHhHHHHHHHHHHHHHHHHHHhccCCCCCEEEEeCCccc
Confidence            69999999872   111               234445543     589999987654

>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0

Probab=98.42  E-value=1.8e-06  Score=63.23  Aligned_cols=80  Identities=18%  Similarity=0.316  Sum_probs=58.3

Q ss_pred             CCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCee---EecCCCccHHHHHHhHCCCCccEE
Q 028523           16 PKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEA---FNYKEEPDLDAALKRYFPEGINIY   92 (208)
Q Consensus        16 ~~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~v---~~~~~~~~~~~~~~~~~~~~~d~v   92 (208)
                      -.+++++||+||+|++|...++.+...|++|+++++++++.+.+.+++.....   .|..+...+.+.+.+.  +++|++
T Consensus        11 ~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~--~~id~l   88 (249)
T 3f9i_A           11 DLTGKTSLITGASSGIGSAIARLLHKLGSKVIISGSNEEKLKSLGNALKDNYTIEVCNLANKEECSNLISKT--SNLDIL   88 (249)
T ss_dssp             CCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCSSEEEEECCTTSHHHHHHHHHTC--SCCSEE
T ss_pred             cCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhccCccEEEcCCCCHHHHHHHHHhc--CCCCEE
Confidence            45789999999999999999998888999999999999988877656654332   2333321222222222  369999


Q ss_pred             EeCCC
Q 028523           93 FENVG   97 (208)
Q Consensus        93 ~d~~g   97 (208)
                      |++.|
T Consensus        89 i~~Ag   93 (249)
T 3f9i_A           89 VCNAG   93 (249)
T ss_dssp             EECCC
T ss_pred             EECCC
Confidence            99987

>4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A*

Probab=98.42  E-value=1.6e-06  Score=63.90  Aligned_cols=105  Identities=11%  Similarity=0.108  Sum_probs=70.8

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH--hcCCCe---eEecCCCccHHHHHHhHCC--CCcc
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKN--KFGFDE---AFNYKEEPDLDAALKRYFP--EGIN   90 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~--~~g~~~---v~~~~~~~~~~~~~~~~~~--~~~d   90 (208)
                      +|+.+||+||++++|.+.++.+...|++|+++++++++.+.+.+  +.+...   ..|..+.++..+.+.+...  +++|
T Consensus         6 ~gKvalVTGas~GIG~aia~~la~~Ga~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~v~~~~~~~G~iD   85 (258)
T 4gkb_A            6 QDKVVIVTGGASGIGGAISMRLAEERAIPVVFARHAPDGAFLDALAQRQPRATYLPVELQDDAQCRDAVAQTIATFGRLD   85 (258)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCCHHHHHHHHHHCTTCEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCcccHHHHHHHHhcCCCEEEEEeecCCHHHHHHHHHHHHHHhCCCC
Confidence            58899999999999999999998999999999988765443321  334322   3455544233333333322  3699


Q ss_pred             EEEeCCCc-h---------h---------------HHHHHHhhc-cCCEEEEEecccc
Q 028523           91 IYFENVGG-K---------M---------------LDAVLLNMR-IQGRITLCGMISQ  122 (208)
Q Consensus        91 ~v~d~~g~-~---------~---------------~~~~~~~l~-~~G~~v~~g~~~~  122 (208)
                      +++++.|- .         .               .+.+++.|+ .+|++|.+++..+
T Consensus        86 iLVNnAGi~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~G~IVnisS~~~  143 (258)
T 4gkb_A           86 GLVNNAGVNDGIGLDAGRDAFVASLERNLIHYYAMAHYCVPHLKATRGAIVNISSKTA  143 (258)
T ss_dssp             EEEECCCCCCCCCTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCTHH
T ss_pred             EEEECCCCCCCCCccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEeehhh
Confidence            99999872 1         0               244555664 3799999987654

>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}

Probab=98.42  E-value=2.9e-06  Score=62.64  Aligned_cols=82  Identities=18%  Similarity=0.260  Sum_probs=57.0

Q ss_pred             CCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhc---CCCe---eEecCCCccHHHHHHhHCC--CC
Q 028523           17 KQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKF---GFDE---AFNYKEEPDLDAALKRYFP--EG   88 (208)
Q Consensus        17 ~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~---g~~~---v~~~~~~~~~~~~~~~~~~--~~   88 (208)
                      -.+.++||+||+|++|...++.+...|++|++++++.++.+.+.+++   +...   ..|..+.+.+.+.+.+...  ++
T Consensus        27 l~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~  106 (262)
T 3rkr_A           27 LSGQVAVVTGASRGIGAAIARKLGSLGARVVLTARDVEKLRAVEREIVAAGGEAESHACDLSHSDAIAAFATGVLAAHGR  106 (262)
T ss_dssp             TTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             cCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhCCceeEEEecCCCHHHHHHHHHHHHHhcCC
Confidence            35789999999999999999988888999999999988776654333   3321   2344443233333333221  26


Q ss_pred             ccEEEeCCCc
Q 028523           89 INIYFENVGG   98 (208)
Q Consensus        89 ~d~v~d~~g~   98 (208)
                      +|++|++.|.
T Consensus       107 id~lv~~Ag~  116 (262)
T 3rkr_A          107 CDVLVNNAGV  116 (262)
T ss_dssp             CSEEEECCCC
T ss_pred             CCEEEECCCc
Confidence            9999999874

>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*

Probab=98.42  E-value=2.2e-06  Score=66.98  Aligned_cols=102  Identities=18%  Similarity=0.139  Sum_probs=76.2

Q ss_pred             HHHHHHHhc-CCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHHHHhH
Q 028523            6 AYAGFFEVC-SPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRY   84 (208)
Q Consensus         6 A~~~l~~~~-~~~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~   84 (208)
                      .+.++.+.. ..-.|++++|.|. |.+|...++.++.+|++|+++++++.+...+. ..|.. +.      ++.+.+.  
T Consensus       206 ~~~gi~rat~~~L~GktV~ViG~-G~IGk~vA~~Lra~Ga~Viv~D~dp~ra~~A~-~~G~~-v~------~Leeal~--  274 (435)
T 3gvp_A          206 ILDGLKRTTDMMFGGKQVVVCGY-GEVGKGCCAALKAMGSIVYVTEIDPICALQAC-MDGFR-LV------KLNEVIR--  274 (435)
T ss_dssp             HHHHHHHHHCCCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHH-HTTCE-EC------CHHHHTT--
T ss_pred             HHHHHHHhhCceecCCEEEEEee-CHHHHHHHHHHHHCCCEEEEEeCChhhhHHHH-HcCCE-ec------cHHHHHh--
Confidence            345554433 3458999999995 99999999999999999999998887766665 56642 21      3433332  


Q ss_pred             CCCCccEEEeCCCc-hhH-HHHHHhhccCCEEEEEeccc
Q 028523           85 FPEGINIYFENVGG-KML-DAVLLNMRIQGRITLCGMIS  121 (208)
Q Consensus        85 ~~~~~d~v~d~~g~-~~~-~~~~~~l~~~G~~v~~g~~~  121 (208)
                         ..|+++.|.+. ..+ ...+..|++++.++.+|...
T Consensus       275 ---~ADIVi~atgt~~lI~~e~l~~MK~gailINvgrg~  310 (435)
T 3gvp_A          275 ---QVDIVITCTGNKNVVTREHLDRMKNSCIVCNMGHSN  310 (435)
T ss_dssp             ---TCSEEEECSSCSCSBCHHHHHHSCTTEEEEECSSTT
T ss_pred             ---cCCEEEECCCCcccCCHHHHHhcCCCcEEEEecCCC
Confidence               48999999884 344 48899999999999988643

>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis}

Probab=98.42  E-value=2.5e-06  Score=62.41  Aligned_cols=80  Identities=20%  Similarity=0.321  Sum_probs=54.5

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeC-CHHHHHHHHHh---cCCCe---eEecCCCccHHHHHHhHCC--CC
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAG-SKDKVDLLKNK---FGFDE---AFNYKEEPDLDAALKRYFP--EG   88 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~-s~~~~~~~~~~---~g~~~---v~~~~~~~~~~~~~~~~~~--~~   88 (208)
                      .+.+++|+||+|++|...++.+...|++|+++++ ++++.+.+.++   .+...   ..|..+.+++.+.+.+...  ++
T Consensus         3 ~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   82 (246)
T 2uvd_A            3 KGKVALVTGASRGIGRAIAIDLAKQGANVVVNYAGNEQKANEVVDEIKKLGSDAIAVRADVANAEDVTNMVKQTVDVFGQ   82 (246)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            4678999999999999999999889999999998 77665544323   24322   2344443233333333221  36


Q ss_pred             ccEEEeCCC
Q 028523           89 INIYFENVG   97 (208)
Q Consensus        89 ~d~v~d~~g   97 (208)
                      +|++|++.|
T Consensus        83 id~lv~nAg   91 (246)
T 2uvd_A           83 VDILVNNAG   91 (246)
T ss_dssp             CCEEEECCC
T ss_pred             CCEEEECCC
Confidence            999999987

>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}

Probab=98.41  E-value=1.9e-06  Score=64.31  Aligned_cols=81  Identities=16%  Similarity=0.172  Sum_probs=56.2

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhc---CCC--e----eEecCCCccHHHHHHhHCC--
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKF---GFD--E----AFNYKEEPDLDAALKRYFP--   86 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~---g~~--~----v~~~~~~~~~~~~~~~~~~--   86 (208)
                      .+.++||+||++++|.+.++.+...|++|+++++++++.+.+.+++   +..  .    ..|..+.+++.+.+.+...  
T Consensus        10 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   89 (281)
T 3svt_A           10 QDRTYLVTGGGSGIGKGVAAGLVAAGASVMIVGRNPDKLAGAVQELEALGANGGAIRYEPTDITNEDETARAVDAVTAWH   89 (281)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCCSSCEEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEeCCCCCHHHHHHHHHHHHHHc
Confidence            5789999999999999999988889999999999988765544333   321  1    2344443233333333322  


Q ss_pred             CCccEEEeCCCc
Q 028523           87 EGINIYFENVGG   98 (208)
Q Consensus        87 ~~~d~v~d~~g~   98 (208)
                      +++|+++++.|.
T Consensus        90 g~id~lv~nAg~  101 (281)
T 3svt_A           90 GRLHGVVHCAGG  101 (281)
T ss_dssp             SCCCEEEECCCC
T ss_pred             CCCCEEEECCCc
Confidence            369999998874

>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A

Probab=98.41  E-value=1.2e-06  Score=64.68  Aligned_cols=80  Identities=14%  Similarity=0.256  Sum_probs=58.7

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCe---eEecCCCccHHHHHHhHC--CCCccEE
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDE---AFNYKEEPDLDAALKRYF--PEGINIY   92 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~---v~~~~~~~~~~~~~~~~~--~~~~d~v   92 (208)
                      .++++||+||+|++|...++.+...|++|++++++.++.+.+.++++...   ..|..+.+++.+.+.+..  -+++|++
T Consensus         7 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~l   86 (259)
T 4e6p_A            7 EGKSALITGSARGIGRAFAEAYVREGATVAIADIDIERARQAAAEIGPAAYAVQMDVTRQDSIDAAIAATVEHAGGLDIL   86 (259)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHSSSCCEE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCceEEEeeCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            57899999999999999999888899999999999988777665666532   234444323333333322  1269999


Q ss_pred             EeCCC
Q 028523           93 FENVG   97 (208)
Q Consensus        93 ~d~~g   97 (208)
                      +++.|
T Consensus        87 v~~Ag   91 (259)
T 4e6p_A           87 VNNAA   91 (259)
T ss_dssp             EECCC
T ss_pred             EECCC
Confidence            99987

>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}

Probab=98.41  E-value=1.3e-06  Score=65.65  Aligned_cols=78  Identities=12%  Similarity=0.187  Sum_probs=58.3

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCe---eEecCCCccHHHHHHhHCCCCccEEEe
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDE---AFNYKEEPDLDAALKRYFPEGINIYFE   94 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~---v~~~~~~~~~~~~~~~~~~~~~d~v~d   94 (208)
                      +|.+++|+||+|++|.+.++.+...|++|+++++++++.+.+.++++...   ..|..+..++.+.+.+.  +++|++|+
T Consensus        15 ~gk~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~--~~iD~lv~   92 (291)
T 3rd5_A           15 AQRTVVITGANSGLGAVTARELARRGATVIMAVRDTRKGEAAARTMAGQVEVRELDLQDLSSVRRFADGV--SGADVLIN   92 (291)
T ss_dssp             TTCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHTTSSSEEEEEECCTTCHHHHHHHHHTC--CCEEEEEE
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhcCCeeEEEcCCCCHHHHHHHHHhc--CCCCEEEE
Confidence            57899999999999999999988899999999999998887765665422   23444431233333333  46999999


Q ss_pred             CCC
Q 028523           95 NVG   97 (208)
Q Consensus        95 ~~g   97 (208)
                      +.|
T Consensus        93 nAg   95 (291)
T 3rd5_A           93 NAG   95 (291)
T ss_dssp             CCC
T ss_pred             CCc
Confidence            987

>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0

Probab=98.41  E-value=2.1e-06  Score=64.82  Aligned_cols=81  Identities=12%  Similarity=0.144  Sum_probs=54.7

Q ss_pred             CCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhc---CCC--e--eEecCCC-ccHHHHHHhHCC--
Q 028523           17 KQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKF---GFD--E--AFNYKEE-PDLDAALKRYFP--   86 (208)
Q Consensus        17 ~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~---g~~--~--v~~~~~~-~~~~~~~~~~~~--   86 (208)
                      ..+.++||+||++++|.+.++.+...|++|++++++.++.+.+.+++   +..  .  ..|..+. ......+.....  
T Consensus        10 ~~~k~vlITGas~GIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~v~~~~~~~~~~~   89 (311)
T 3o26_A           10 TKRRCAVVTGGNKGIGFEICKQLSSNGIMVVLTCRDVTKGHEAVEKLKNSNHENVVFHQLDVTDPIATMSSLADFIKTHF   89 (311)
T ss_dssp             --CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCSEEEEECCTTSCHHHHHHHHHHHHHHH
T ss_pred             CCCcEEEEecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCceEEEEccCCCcHHHHHHHHHHHHHhC
Confidence            45789999999999999999888889999999999988765544333   221  1  2344443 222332222211  


Q ss_pred             CCccEEEeCCC
Q 028523           87 EGINIYFENVG   97 (208)
Q Consensus        87 ~~~d~v~d~~g   97 (208)
                      +++|++|++.|
T Consensus        90 g~iD~lv~nAg  100 (311)
T 3o26_A           90 GKLDILVNNAG  100 (311)
T ss_dssp             SSCCEEEECCC
T ss_pred             CCCCEEEECCc
Confidence            26999999988

>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}

Probab=98.41  E-value=1.2e-06  Score=64.69  Aligned_cols=80  Identities=21%  Similarity=0.308  Sum_probs=59.0

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCe---eEecCCCccHHHHHHhHCC--CCccEE
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDE---AFNYKEEPDLDAALKRYFP--EGINIY   92 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~---v~~~~~~~~~~~~~~~~~~--~~~d~v   92 (208)
                      .+.++||+||++++|.+.++.+...|++|+++++++++.+.+.++++...   ..|..+.+++.+.+.+...  +++|++
T Consensus         8 ~~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l   87 (261)
T 3n74_A            8 EGKVALITGAGSGFGEGMAKRFAKGGAKVVIVDRDKAGAERVAGEIGDAALAVAADISKEADVDAAVEAALSKFGKVDIL   87 (261)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTEEEEECCTTSHHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHhcCCCCEE
Confidence            47899999999999999999998899999999999998887775676532   2344443233333333322  269999


Q ss_pred             EeCCC
Q 028523           93 FENVG   97 (208)
Q Consensus        93 ~d~~g   97 (208)
                      |++.|
T Consensus        88 i~~Ag   92 (261)
T 3n74_A           88 VNNAG   92 (261)
T ss_dssp             EECCC
T ss_pred             EECCc
Confidence            99887

>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*

Probab=98.41  E-value=1.5e-06  Score=64.42  Aligned_cols=80  Identities=13%  Similarity=0.142  Sum_probs=54.4

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHH-cCCEEEEEeCCHHHHHHHHHhc---CCC-e--eEecCCCccHHHHHHhHCC--CC
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKL-VGCYVVGSAGSKDKVDLLKNKF---GFD-E--AFNYKEEPDLDAALKRYFP--EG   88 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~-~g~~v~~~~~s~~~~~~~~~~~---g~~-~--v~~~~~~~~~~~~~~~~~~--~~   88 (208)
                      ++.++||+||+|++|...++.+.. .|++|++++++.++.+.+.+++   +.. .  ..|..+...+.+.+.+...  ++
T Consensus         3 ~~k~vlITGasggIG~~~a~~L~~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~   82 (276)
T 1wma_A            3 GIHVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDDLQSIRALRDFLRKEYGG   82 (276)
T ss_dssp             CCCEEEESSCSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHhcCCeEEEEeCChHHHHHHHHHHHhcCCeeEEEECCCCCHHHHHHHHHHHHHhcCC
Confidence            578999999999999999888877 8999999999987665543333   332 2  2344443233333333221  26


Q ss_pred             ccEEEeCCC
Q 028523           89 INIYFENVG   97 (208)
Q Consensus        89 ~d~v~d~~g   97 (208)
                      +|++|++.|
T Consensus        83 id~li~~Ag   91 (276)
T 1wma_A           83 LDVLVNNAG   91 (276)
T ss_dssp             EEEEEECCC
T ss_pred             CCEEEECCc
Confidence            999999887

>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E

Probab=98.41  E-value=8.1e-07  Score=65.16  Aligned_cols=80  Identities=25%  Similarity=0.451  Sum_probs=58.6

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCe---eEecCCCccHHHHHHhHCC--CCccEE
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDE---AFNYKEEPDLDAALKRYFP--EGINIY   92 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~---v~~~~~~~~~~~~~~~~~~--~~~d~v   92 (208)
                      +|+++||+||++++|.+.++.+...|++|+++++++++.+.+.++++...   ..|..+.+++.+.+.+...  +++|++
T Consensus         8 ~gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~l   87 (248)
T 3op4_A            8 EGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLGDNGKGMALNVTNPESIEAVLKAITDEFGGVDIL   87 (248)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHHCCCSEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcccceEEEEeCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            57899999999999999999999999999999999988777664554321   3455544233333333322  369999


Q ss_pred             EeCCC
Q 028523           93 FENVG   97 (208)
Q Consensus        93 ~d~~g   97 (208)
                      +++.|
T Consensus        88 v~nAg   92 (248)
T 3op4_A           88 VNNAG   92 (248)
T ss_dssp             EECCC
T ss_pred             EECCC
Confidence            99987

>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}

Probab=98.40  E-value=3.4e-06  Score=62.70  Aligned_cols=104  Identities=16%  Similarity=0.261  Sum_probs=68.3

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCC-HHHHHHHHH---hcCCCe---eEecCCCccHHHHHHhHCC--CC
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGS-KDKVDLLKN---KFGFDE---AFNYKEEPDLDAALKRYFP--EG   88 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s-~~~~~~~~~---~~g~~~---v~~~~~~~~~~~~~~~~~~--~~   88 (208)
                      .|+++||+||++++|.+.++.+...|++|++++++ .++.+.+.+   +.|...   ..|..+.+++.+.+.+...  ++
T Consensus        30 ~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~  109 (271)
T 3v2g_A           30 AGKTAFVTGGSRGIGAAIAKRLALEGAAVALTYVNAAERAQAVVSEIEQAGGRAVAIRADNRDAEAIEQAIRETVEALGG  109 (271)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            57899999999999999999998899999998654 344443332   334432   2344443233333333322  26


Q ss_pred             ccEEEeCCCc-h-------------------------hHHHHHHhhccCCEEEEEeccc
Q 028523           89 INIYFENVGG-K-------------------------MLDAVLLNMRIQGRITLCGMIS  121 (208)
Q Consensus        89 ~d~v~d~~g~-~-------------------------~~~~~~~~l~~~G~~v~~g~~~  121 (208)
                      +|+++++.|. .                         ..+.+++.|+++|+++.++...
T Consensus       110 iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~g~iv~isS~~  168 (271)
T 3v2g_A          110 LDILVNSAGIWHSAPLEETTVADFDEVMAVNFRAPFVAIRSASRHLGDGGRIITIGSNL  168 (271)
T ss_dssp             CCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECCGG
T ss_pred             CcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEeChh
Confidence            9999999872 1                         1244556677789999997754

>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}

Probab=98.40  E-value=1.3e-06  Score=65.19  Aligned_cols=105  Identities=16%  Similarity=0.232  Sum_probs=73.2

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCe---eEecCCCccHHHHHHhHCC--CCccEE
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDE---AFNYKEEPDLDAALKRYFP--EGINIY   92 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~---v~~~~~~~~~~~~~~~~~~--~~~d~v   92 (208)
                      .+.++||+||++++|.+.++.+...|++|+++++++++.+.+.++++...   ..|..+..++.+.+.+...  +++|++
T Consensus        26 ~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~l  105 (277)
T 4dqx_A           26 NQRVCIVTGGGSGIGRATAELFAKNGAYVVVADVNEDAAVRVANEIGSKAFGVRVDVSSAKDAESMVEKTTAKWGRVDVL  105 (277)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            57899999999999999999998999999999999988777765666532   2344443233333333221  269999


Q ss_pred             EeCCCc-h----------h---------------HHHHHHhhcc--CCEEEEEecccc
Q 028523           93 FENVGG-K----------M---------------LDAVLLNMRI--QGRITLCGMISQ  122 (208)
Q Consensus        93 ~d~~g~-~----------~---------------~~~~~~~l~~--~G~~v~~g~~~~  122 (208)
                      |++.|. .          .               .+.+++.|..  +|+++.+++...
T Consensus       106 v~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~  163 (277)
T 4dqx_A          106 VNNAGFGTTGNVVTIPEETWDRIMSVNVKGIFLCSKYVIPVMRRNGGGSIINTTSYTA  163 (277)
T ss_dssp             EECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTTCEEEEEECCGGG
T ss_pred             EECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECchhh
Confidence            999872 1          1               2344555544  579999987654

>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A*

Probab=98.39  E-value=1.1e-06  Score=64.70  Aligned_cols=105  Identities=15%  Similarity=0.154  Sum_probs=71.4

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCe---eEecCCCccHHHHHHhHCC--CCccEE
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDE---AFNYKEEPDLDAALKRYFP--EGINIY   92 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~---v~~~~~~~~~~~~~~~~~~--~~~d~v   92 (208)
                      ++.++||+||+|++|.+.++.+...|++|+++++++++.+.+.++++...   ..|..+.+++.+.+.+...  +++|++
T Consensus         4 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~iD~l   83 (254)
T 1hdc_A            4 SGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATARELGDAARYQHLDVTIEEDWQRVVAYAREEFGSVDGL   83 (254)
T ss_dssp             CCSEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceeEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            47889999999999999999998899999999999888776654565322   2344443233333333222  269999


Q ss_pred             EeCCCc-h----------hH---------------HHHHHhhcc--CCEEEEEecccc
Q 028523           93 FENVGG-K----------ML---------------DAVLLNMRI--QGRITLCGMISQ  122 (208)
Q Consensus        93 ~d~~g~-~----------~~---------------~~~~~~l~~--~G~~v~~g~~~~  122 (208)
                      |++.|. .          .+               +.+++.|..  .|+++.+++...
T Consensus        84 v~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~  141 (254)
T 1hdc_A           84 VNNAGISTGMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDAGGGSIVNISSAAG  141 (254)
T ss_dssp             EECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGG
T ss_pred             EECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhh
Confidence            998872 1          01               234455543  589999987654

>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0

Probab=98.39  E-value=8.8e-07  Score=64.43  Aligned_cols=104  Identities=11%  Similarity=0.025  Sum_probs=70.3

Q ss_pred             CCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCe---eEecCCCccHHHHHHhHCC--CCccEEE
Q 028523           19 GEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDE---AFNYKEEPDLDAALKRYFP--EGINIYF   93 (208)
Q Consensus        19 g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~---v~~~~~~~~~~~~~~~~~~--~~~d~v~   93 (208)
                      +.++||+||++++|.+.++.+...|++|+++++++++.+.+.++++...   ..|..+.+++.+.+.+...  +++|+++
T Consensus         3 ~k~vlVTGas~GIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~lv   82 (235)
T 3l6e_A            3 LGHIIVTGAGSGLGRALTIGLVERGHQVSMMGRRYQRLQQQELLLGNAVIGIVADLAHHEDVDVAFAAAVEWGGLPELVL   82 (235)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGEEEEECCTTSHHHHHHHHHHHHHHHCSCSEEE
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhcCCceEEECCCCCHHHHHHHHHHHHHhcCCCcEEE
Confidence            5789999999999999999888899999999999988877765554321   2344443233333333221  3699999


Q ss_pred             eCCCc-h----------h---------------HHHHHHhhc-cCCEEEEEecccc
Q 028523           94 ENVGG-K----------M---------------LDAVLLNMR-IQGRITLCGMISQ  122 (208)
Q Consensus        94 d~~g~-~----------~---------------~~~~~~~l~-~~G~~v~~g~~~~  122 (208)
                      ++.|. .          .               .+.+++.|. .+|+++.+++...
T Consensus        83 nnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~iv~isS~~~  138 (235)
T 3l6e_A           83 HCAGTGEFGPVGVYTAEQIRRVMESNLVSTILVAQQTVRLIGERGGVLANVLSSAA  138 (235)
T ss_dssp             EECCCC------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEECCEEC
T ss_pred             ECCCCCCCCChHhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCEEEEEeCHHh
Confidence            98873 1          0               133445554 4668888877553

>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A*

Probab=98.38  E-value=1.4e-06  Score=65.08  Aligned_cols=80  Identities=18%  Similarity=0.223  Sum_probs=58.5

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCe---eEecCCCccHHHHHHhHCC--CCccEE
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDE---AFNYKEEPDLDAALKRYFP--EGINIY   92 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~---v~~~~~~~~~~~~~~~~~~--~~~d~v   92 (208)
                      .|+++||+||++++|.+.++.+...|++|++++++.++.+.+.++++...   ..|..+..+....+.+...  +++|++
T Consensus         4 ~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~l   83 (281)
T 3zv4_A            4 TGEVALITGGASGLGRALVDRFVAEGARVAVLDKSAERLRELEVAHGGNAVGVVGDVRSLQDQKRAAERCLAAFGKIDTL   83 (281)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTBTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHHHHHhcCCCCEE
Confidence            47899999999999999999998999999999999998877765665432   2344443233333333221  369999


Q ss_pred             EeCCC
Q 028523           93 FENVG   97 (208)
Q Consensus        93 ~d~~g   97 (208)
                      +++.|
T Consensus        84 vnnAg   88 (281)
T 3zv4_A           84 IPNAG   88 (281)
T ss_dssp             ECCCC
T ss_pred             EECCC
Confidence            99987

>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2

Probab=98.38  E-value=2.2e-06  Score=63.87  Aligned_cols=80  Identities=24%  Similarity=0.405  Sum_probs=55.0

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHh---cCC-Ce----eEecCCCccHHHHHHhHCC--C
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNK---FGF-DE----AFNYKEEPDLDAALKRYFP--E   87 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~---~g~-~~----v~~~~~~~~~~~~~~~~~~--~   87 (208)
                      ++.++||+||+|++|...++.+...|++|+++++++++.+.+.++   .|. ..    ..|..+...+.+.+.+...  +
T Consensus        31 ~~k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g  110 (279)
T 1xg5_A           31 RDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRSQHS  110 (279)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHHHHHC
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEECChHHHHHHHHHHHhcCCCceEEEEEecCCCHHHHHHHHHHHHHhCC
Confidence            578999999999999999999888999999999998776654422   232 11    2344443233333332221  2


Q ss_pred             CccEEEeCCC
Q 028523           88 GINIYFENVG   97 (208)
Q Consensus        88 ~~d~v~d~~g   97 (208)
                      ++|++|++.|
T Consensus       111 ~iD~vi~~Ag  120 (279)
T 1xg5_A          111 GVDICINNAG  120 (279)
T ss_dssp             CCSEEEECCC
T ss_pred             CCCEEEECCC
Confidence            6999999987

>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae}

Probab=98.38  E-value=5.3e-06  Score=62.16  Aligned_cols=105  Identities=19%  Similarity=0.223  Sum_probs=71.8

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCC---EEEEEeCCHHHHHHHHHhc-----CCCe---eEecCCCccHHHHHHhHCC
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGC---YVVGSAGSKDKVDLLKNKF-----GFDE---AFNYKEEPDLDAALKRYFP   86 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~---~v~~~~~s~~~~~~~~~~~-----g~~~---v~~~~~~~~~~~~~~~~~~   86 (208)
                      .|.++||+||++++|.+.++.+...|+   +|+.++++.++.+.+.+++     +...   ..|..+.+++.+.+.+...
T Consensus        32 ~~k~~lVTGas~GIG~aia~~l~~~G~~~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~  111 (287)
T 3rku_A           32 AKKTVLITGASAGIGKATALEYLEASNGDMKLILAARRLEKLEELKKTIDQEFPNAKVHVAQLDITQAEKIKPFIENLPQ  111 (287)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHCTTCEEEEEECCTTCGGGHHHHHHTSCG
T ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCCCceEEEEECCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHHHH
Confidence            478999999999999998877766666   9999999988877665443     3221   2455555355555555433


Q ss_pred             C--CccEEEeCCCc-h-----------h---------------HHHHHHhh--ccCCEEEEEecccc
Q 028523           87 E--GINIYFENVGG-K-----------M---------------LDAVLLNM--RIQGRITLCGMISQ  122 (208)
Q Consensus        87 ~--~~d~v~d~~g~-~-----------~---------------~~~~~~~l--~~~G~~v~~g~~~~  122 (208)
                      .  ++|++|++.|. .           .               .+.+++.|  +.+|+++.+++..+
T Consensus       112 ~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~~~  178 (287)
T 3rku_A          112 EFKDIDILVNNAGKALGSDRVGQIATEDIQDVFDTNVTALINITQAVLPIFQAKNSGDIVNLGSIAG  178 (287)
T ss_dssp             GGCSCCEEEECCCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGG
T ss_pred             hcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEECChhh
Confidence            2  69999998872 1           0               23344444  34699999987664

>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2

Probab=98.37  E-value=3.9e-06  Score=61.73  Aligned_cols=79  Identities=14%  Similarity=0.179  Sum_probs=54.6

Q ss_pred             CCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhc---CCCe---eEecCCCccHHHHHHhHC--CCCcc
Q 028523           19 GEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKF---GFDE---AFNYKEEPDLDAALKRYF--PEGIN   90 (208)
Q Consensus        19 g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~---g~~~---v~~~~~~~~~~~~~~~~~--~~~~d   90 (208)
                      +.++||+||+|++|...++.+...|++|+++++++++.+.+.+++   |...   ..|..+.+++.+.+.+..  -+++|
T Consensus         2 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id   81 (256)
T 1geg_A            2 KKVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGHAVAVKVDVSDRDQVFAAVEQARKTLGGFD   81 (256)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHTTCCC
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCCC
Confidence            468999999999999999999889999999999988765544333   4321   234444323333333221  13699


Q ss_pred             EEEeCCC
Q 028523           91 IYFENVG   97 (208)
Q Consensus        91 ~v~d~~g   97 (208)
                      ++|++.|
T Consensus        82 ~lv~nAg   88 (256)
T 1geg_A           82 VIVNNAG   88 (256)
T ss_dssp             EEEECCC
T ss_pred             EEEECCC
Confidence            9999887

>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A

Probab=98.37  E-value=3.3e-06  Score=62.64  Aligned_cols=104  Identities=16%  Similarity=0.269  Sum_probs=69.2

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCC-HHHHHHHHH---hcCCCe---eEecCCCccHHHHHHhHCC--CC
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGS-KDKVDLLKN---KFGFDE---AFNYKEEPDLDAALKRYFP--EG   88 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s-~~~~~~~~~---~~g~~~---v~~~~~~~~~~~~~~~~~~--~~   88 (208)
                      .|+++||+||++++|.+.++.+...|++|++++++ .+..+.+.+   +.|...   ..|..+.+++.+.+.+...  ++
T Consensus        17 ~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   96 (270)
T 3is3_A           17 DGKVALVTGSGRGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIKALGSDAIAIKADIRQVPEIVKLFDQAVAHFGH   96 (270)
T ss_dssp             TTCEEEESCTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            57899999999999999999999999999987654 444433332   344432   2344443233333333322  26


Q ss_pred             ccEEEeCCCc-h-------------------------hHHHHHHhhccCCEEEEEeccc
Q 028523           89 INIYFENVGG-K-------------------------MLDAVLLNMRIQGRITLCGMIS  121 (208)
Q Consensus        89 ~d~v~d~~g~-~-------------------------~~~~~~~~l~~~G~~v~~g~~~  121 (208)
                      +|+++++.|. .                         ..+.+++.|.++|+++.++...
T Consensus        97 id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS~~  155 (270)
T 3is3_A           97 LDIAVSNSGVVSFGHLKDVTEEEFDRVFSLNTRGQFFVAREAYRHLTEGGRIVLTSSNT  155 (270)
T ss_dssp             CCEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECCTT
T ss_pred             CCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCeEEEEeCch
Confidence            9999998872 1                         1245666777799999998755

>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}

Probab=98.37  E-value=2.8e-06  Score=63.27  Aligned_cols=105  Identities=20%  Similarity=0.226  Sum_probs=69.3

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhc---CCCe---eEecCCCccHHHHHHhHCC-CCcc
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKF---GFDE---AFNYKEEPDLDAALKRYFP-EGIN   90 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~---g~~~---v~~~~~~~~~~~~~~~~~~-~~~d   90 (208)
                      .|+++||+||++++|.+.++.+...|++|+++++++++.+.+.+++   +...   ..|..+.....+.+..... +++|
T Consensus        32 ~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~g~iD  111 (275)
T 4imr_A           32 RGRTALVTGSSRGIGAAIAEGLAGAGAHVILHGVKPGSTAAVQQRIIASGGTAQELAGDLSEAGAGTDLIERAEAIAPVD  111 (275)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSTTTTHHHHHHHHHTTCCEEEEECCTTSTTHHHHHHHHHHHHSCCC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHhCCCC
Confidence            5789999999999999999999889999999999887655544333   4322   2344444223332222211 4799


Q ss_pred             EEEeCCCc-h----------h---------------HHHHHHhh--ccCCEEEEEecccc
Q 028523           91 IYFENVGG-K----------M---------------LDAVLLNM--RIQGRITLCGMISQ  122 (208)
Q Consensus        91 ~v~d~~g~-~----------~---------------~~~~~~~l--~~~G~~v~~g~~~~  122 (208)
                      +++++.|. .          .               .+.+++.|  +.+|+++.+++...
T Consensus       112 ~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~  171 (275)
T 4imr_A          112 ILVINASAQINATLSALTPNDLAFQLAVNLGSTVDMLQSALPKMVARKWGRVVSIGSINQ  171 (275)
T ss_dssp             EEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGG
T ss_pred             EEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECCHHh
Confidence            99999872 1          0               23344444  33689999987654

>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0

Probab=98.35  E-value=1.2e-06  Score=65.20  Aligned_cols=80  Identities=14%  Similarity=0.171  Sum_probs=58.7

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCe---eEecCCCccHHHHHHhHCC--CCccEE
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDE---AFNYKEEPDLDAALKRYFP--EGINIY   92 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~---v~~~~~~~~~~~~~~~~~~--~~~d~v   92 (208)
                      .|+++||+||++++|.+.++.+...|++|+++++++++.+.+.++++...   ..|..+..++.+.+.+...  +++|++
T Consensus        10 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~l   89 (271)
T 3tzq_B           10 ENKVAIITGACGGIGLETSRVLARAGARVVLADLPETDLAGAAASVGRGAVHHVVDLTNEVSVRALIDFTIDTFGRLDIV   89 (271)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSCHHHHHHHHCTTCEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhCCCeEEEECCCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            57899999999999999999999999999999999888777665666532   3455443233333333221  269999


Q ss_pred             EeCCC
Q 028523           93 FENVG   97 (208)
Q Consensus        93 ~d~~g   97 (208)
                      +++.|
T Consensus        90 v~nAg   94 (271)
T 3tzq_B           90 DNNAA   94 (271)
T ss_dssp             EECCC
T ss_pred             EECCC
Confidence            99887

>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A*

Probab=98.35  E-value=1e-05  Score=58.93  Aligned_cols=78  Identities=19%  Similarity=0.203  Sum_probs=55.0

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCee--EecCCCccHHHHHHhHCCCCccEEEeC
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEA--FNYKEEPDLDAALKRYFPEGINIYFEN   95 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~v--~~~~~~~~~~~~~~~~~~~~~d~v~d~   95 (208)
                      ++.++||+||+|++|...++.+...|++|+++++++++.+.+.+++....+  .|..+.+.+.+.+.  .-+++|++|++
T Consensus         6 ~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~--~~~~id~vi~~   83 (244)
T 3d3w_A            6 AGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRECPGIEPVCVDLGDWEATERALG--SVGPVDLLVNN   83 (244)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHSTTCEEEECCTTCHHHHHHHHT--TCCCCCEEEEC
T ss_pred             CCcEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCCCEEEEeCCCHHHHHHHHH--HcCCCCEEEEC
Confidence            578999999999999999999988999999999998877766534432233  33333211222222  11369999999


Q ss_pred             CC
Q 028523           96 VG   97 (208)
Q Consensus        96 ~g   97 (208)
                      .|
T Consensus        84 Ag   85 (244)
T 3d3w_A           84 AA   85 (244)
T ss_dssp             CC
T ss_pred             Cc
Confidence            87

>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*

Probab=98.34  E-value=3.7e-06  Score=63.15  Aligned_cols=105  Identities=16%  Similarity=0.192  Sum_probs=68.3

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHH-HHHHHH---hcCCCe---eEecCCCccHHHHHHhHCC--CC
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDK-VDLLKN---KFGFDE---AFNYKEEPDLDAALKRYFP--EG   88 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~-~~~~~~---~~g~~~---v~~~~~~~~~~~~~~~~~~--~~   88 (208)
                      +|+++||+||++++|.+.++.+...|++|++++++.++ .+.+.+   +.|...   ..|..+..++.+.+.+...  ++
T Consensus        46 ~gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~  125 (291)
T 3ijr_A           46 KGKNVLITGGDSGIGRAVSIAFAKEGANIAIAYLDEEGDANETKQYVEKEGVKCVLLPGDLSDEQHCKDIVQETVRQLGS  125 (291)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTTCCEEEEESCTTSHHHHHHHHHHHHHHHSS
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            57899999999999999999999999999999987653 222221   344432   2344443233333333222  26


Q ss_pred             ccEEEeCCCc--h-------------------------hHHHHHHhhccCCEEEEEecccc
Q 028523           89 INIYFENVGG--K-------------------------MLDAVLLNMRIQGRITLCGMISQ  122 (208)
Q Consensus        89 ~d~v~d~~g~--~-------------------------~~~~~~~~l~~~G~~v~~g~~~~  122 (208)
                      +|++|++.|.  .                         ..+.+++.|+++|+++.+++...
T Consensus       126 iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~iv~isS~~~  186 (291)
T 3ijr_A          126 LNILVNNVAQQYPQQGLEYITAEQLEKTFRINIFSYFHVTKAALSHLKQGDVIINTASIVA  186 (291)
T ss_dssp             CCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCCTTCEEEEECCTHH
T ss_pred             CCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCEEEEEechHh
Confidence            9999998762  1                         02345556677899999886543

>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*

Probab=98.34  E-value=4e-06  Score=62.02  Aligned_cols=105  Identities=8%  Similarity=0.073  Sum_probs=68.9

Q ss_pred             CCCEEEEecCC--chHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH---HhcCCC--e--eEecCCCccHHHHHHhHCC--
Q 028523           18 QGEYVFVSAAS--GAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLK---NKFGFD--E--AFNYKEEPDLDAALKRYFP--   86 (208)
Q Consensus        18 ~g~~vli~ga~--g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~---~~~g~~--~--v~~~~~~~~~~~~~~~~~~--   86 (208)
                      .|.++||+||+  +|+|.+.++.+...|++|++++++++..+.+.   ++++..  .  ..|..+..++.+.+.+...  
T Consensus         6 ~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~   85 (266)
T 3oig_A            6 EGRNIVVMGVANKRSIAWGIARSLHEAGARLIFTYAGERLEKSVHELAGTLDRNDSIILPCDVTNDAEIETCFASIKEQV   85 (266)
T ss_dssp             TTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHTSSSCCCEEEECCCSSSHHHHHHHHHHHHHH
T ss_pred             CCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEecCchHHHHHHHHHHHhcCCCCceEEeCCCCCHHHHHHHHHHHHHHh
Confidence            57899999999  45999999888888999999998875444333   133331  1  3455554234433433322  


Q ss_pred             CCccEEEeCCCc-h-----------------------------hHHHHHHhhccCCEEEEEecccc
Q 028523           87 EGINIYFENVGG-K-----------------------------MLDAVLLNMRIQGRITLCGMISQ  122 (208)
Q Consensus        87 ~~~d~v~d~~g~-~-----------------------------~~~~~~~~l~~~G~~v~~g~~~~  122 (208)
                      +++|+++++.|. .                             ..+.+++.++++|+++.+++...
T Consensus        86 g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~~  151 (266)
T 3oig_A           86 GVIHGIAHCIAFANKEELVGEYLNTNRDGFLLAHNISSYSLTAVVKAARPMMTEGGSIVTLTYLGG  151 (266)
T ss_dssp             SCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEECGGG
T ss_pred             CCeeEEEEccccccccccccchhhccHHHHHHHHHHhHHHHHHHHHHHHhhcCCCceEEEEecccc
Confidence            269999998872 1                             02334455666899999987654

>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}

Probab=98.34  E-value=2e-06  Score=63.36  Aligned_cols=80  Identities=16%  Similarity=0.233  Sum_probs=57.5

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCC---Ce---eEecCCCccHHHHHHhHCC--CCc
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGF---DE---AFNYKEEPDLDAALKRYFP--EGI   89 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~---~~---v~~~~~~~~~~~~~~~~~~--~~~   89 (208)
                      ++.++||+||++++|.+.++.+...|++|+++++++++.+.+.+++..   ..   ..|..+.+++.+.+.+...  +++
T Consensus         5 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i   84 (257)
T 3imf_A            5 KEKVVIITGGSSGMGKGMATRFAKEGARVVITGRTKEKLEEAKLEIEQFPGQILTVQMDVRNTDDIQKMIEQIDEKFGRI   84 (257)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCSTTCEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            578999999999999999999989999999999999887776645432   21   2344443233333333322  369


Q ss_pred             cEEEeCCC
Q 028523           90 NIYFENVG   97 (208)
Q Consensus        90 d~v~d~~g   97 (208)
                      |+++++.|
T Consensus        85 d~lv~nAg   92 (257)
T 3imf_A           85 DILINNAA   92 (257)
T ss_dssp             CEEEECCC
T ss_pred             CEEEECCC
Confidence            99999987

>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*

Probab=98.33  E-value=4.8e-06  Score=61.39  Aligned_cols=105  Identities=15%  Similarity=0.162  Sum_probs=68.9

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEE-eCCHHHHHHHHHhc---CCCe---eEecCCCccHHHHHHhHCC--CC
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGS-AGSKDKVDLLKNKF---GFDE---AFNYKEEPDLDAALKRYFP--EG   88 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~-~~s~~~~~~~~~~~---g~~~---v~~~~~~~~~~~~~~~~~~--~~   88 (208)
                      ++.++||+||+|++|.+.++.+...|++|+++ .+++++.+.+.+++   |...   ..|..+.+++.+.+.+...  ++
T Consensus         3 ~~k~vlVTGas~gIG~aia~~l~~~G~~vv~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   82 (258)
T 3oid_A            3 QNKCALVTGSSRGVGKAAAIRLAENGYNIVINYARSKKAALETAEEIEKLGVKVLVVKANVGQPAKIKEMFQQIDETFGR   82 (258)
T ss_dssp             CCCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEecCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            57899999999999999999999999999987 77777665554333   4322   2344443233333333221  26


Q ss_pred             ccEEEeCCCc-h----------h---------------HHHHHHhhcc--CCEEEEEecccc
Q 028523           89 INIYFENVGG-K----------M---------------LDAVLLNMRI--QGRITLCGMISQ  122 (208)
Q Consensus        89 ~d~v~d~~g~-~----------~---------------~~~~~~~l~~--~G~~v~~g~~~~  122 (208)
                      +|+++++.|. .          .               .+.+++.|..  +|+++.+++...
T Consensus        83 id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~  144 (258)
T 3oid_A           83 LDVFVNNAASGVLRPVMELEETHWDWTMNINAKALLFCAQEAAKLMEKNGGGHIVSISSLGS  144 (258)
T ss_dssp             CCEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEEEEGGG
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECchhh
Confidence            9999999862 1          0               2334445544  589999987654

>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}

Probab=98.33  E-value=9.6e-06  Score=60.96  Aligned_cols=94  Identities=18%  Similarity=0.234  Sum_probs=72.2

Q ss_pred             CCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHHHHhHCCCCccEEEeC
Q 028523           16 PKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFEN   95 (208)
Q Consensus        16 ~~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~d~v~d~   95 (208)
                      --.|++|+|+|. |.+|..+++.++..|++|++.+++.++.+.+. ++|.. .+++.   ++.+.+.     ..|+|+.+
T Consensus       152 ~l~g~~v~IiG~-G~iG~~~a~~l~~~G~~V~~~dr~~~~~~~~~-~~g~~-~~~~~---~l~~~l~-----~aDvVi~~  220 (293)
T 3d4o_A          152 TIHGANVAVLGL-GRVGMSVARKFAALGAKVKVGARESDLLARIA-EMGME-PFHIS---KAAQELR-----DVDVCINT  220 (293)
T ss_dssp             CSTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH-HTTSE-EEEGG---GHHHHTT-----TCSEEEEC
T ss_pred             CCCCCEEEEEee-CHHHHHHHHHHHhCCCEEEEEECCHHHHHHHH-HCCCe-ecChh---hHHHHhc-----CCCEEEEC
Confidence            347899999995 99999999999999999999999988877777 77764 33221   3333222     48999999


Q ss_pred             CCch-hHHHHHHhhccCCEEEEEecc
Q 028523           96 VGGK-MLDAVLLNMRIQGRITLCGMI  120 (208)
Q Consensus        96 ~g~~-~~~~~~~~l~~~G~~v~~g~~  120 (208)
                      ++.. .-...+..|++++.++.++..
T Consensus       221 ~p~~~i~~~~l~~mk~~~~lin~ar~  246 (293)
T 3d4o_A          221 IPALVVTANVLAEMPSHTFVIDLASK  246 (293)
T ss_dssp             CSSCCBCHHHHHHSCTTCEEEECSST
T ss_pred             CChHHhCHHHHHhcCCCCEEEEecCC
Confidence            9843 335678889999999998763

>3n58_A Adenosylhomocysteinase; ssgcid, hydrolase, structural genomics, seattle structural G center for infectious disease; HET: ADN NAD; 2.39A {Brucella melitensis biovar abortus}

Probab=98.32  E-value=8.5e-06  Score=63.94  Aligned_cols=101  Identities=19%  Similarity=0.108  Sum_probs=75.2

Q ss_pred             HHHHHHh-cCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHHHHhHC
Q 028523            7 YAGFFEV-CSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYF   85 (208)
Q Consensus         7 ~~~l~~~-~~~~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~   85 (208)
                      +.++.+. ...-.|++++|.|. |.+|..+++.++.+|++|+++.+++.+...+. ..|.. +.      ++.+.++   
T Consensus       234 vdgI~Ratg~~L~GKTVgVIG~-G~IGr~vA~~lrafGa~Viv~d~dp~~a~~A~-~~G~~-vv------~LeElL~---  301 (464)
T 3n58_A          234 VDGIRRGTDVMMAGKVAVVCGY-GDVGKGSAQSLAGAGARVKVTEVDPICALQAA-MDGFE-VV------TLDDAAS---  301 (464)
T ss_dssp             HHHHHHHHCCCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHHHHHHH-HTTCE-EC------CHHHHGG---
T ss_pred             HHHHHHhcCCcccCCEEEEECc-CHHHHHHHHHHHHCCCEEEEEeCCcchhhHHH-hcCce-ec------cHHHHHh---
Confidence            4444333 24568999999995 99999999999999999999998877655555 55653 21      3433333   


Q ss_pred             CCCccEEEeCCCch-hH-HHHHHhhccCCEEEEEeccc
Q 028523           86 PEGINIYFENVGGK-ML-DAVLLNMRIQGRITLCGMIS  121 (208)
Q Consensus        86 ~~~~d~v~d~~g~~-~~-~~~~~~l~~~G~~v~~g~~~  121 (208)
                        ..|+++.+.+.. .+ ...+..|++++.++.+|...
T Consensus       302 --~ADIVv~atgt~~lI~~e~l~~MK~GAILINvGRgd  337 (464)
T 3n58_A          302 --TADIVVTTTGNKDVITIDHMRKMKDMCIVGNIGHFD  337 (464)
T ss_dssp             --GCSEEEECCSSSSSBCHHHHHHSCTTEEEEECSSST
T ss_pred             --hCCEEEECCCCccccCHHHHhcCCCCeEEEEcCCCC
Confidence              389999998854 33 68899999999999988643

>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2

Probab=98.32  E-value=2.6e-06  Score=63.13  Aligned_cols=80  Identities=16%  Similarity=0.250  Sum_probs=56.1

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhc----CCCe---eEecCCCccHHHHHHhHCC--CC
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKF----GFDE---AFNYKEEPDLDAALKRYFP--EG   88 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~----g~~~---v~~~~~~~~~~~~~~~~~~--~~   88 (208)
                      .+.++||+||+|++|...++.+...|++|+++++++++.+.+.+++    |...   ..|..+..++...+.+...  ++
T Consensus        20 ~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~   99 (267)
T 1vl8_A           20 RGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSNYEEVKKLLEAVKEKFGK   99 (267)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            5789999999999999999999889999999999988765543333    5432   2344443233333332221  36


Q ss_pred             ccEEEeCCC
Q 028523           89 INIYFENVG   97 (208)
Q Consensus        89 ~d~v~d~~g   97 (208)
                      +|++|++.|
T Consensus       100 iD~lvnnAg  108 (267)
T 1vl8_A          100 LDTVVNAAG  108 (267)
T ss_dssp             CCEEEECCC
T ss_pred             CCEEEECCC
Confidence            999999987

>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0

Probab=98.32  E-value=6.1e-06  Score=61.64  Aligned_cols=104  Identities=13%  Similarity=0.142  Sum_probs=68.3

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCC------------HHHHHHHHH---hcCCCe---eEecCCCccHHH
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGS------------KDKVDLLKN---KFGFDE---AFNYKEEPDLDA   79 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s------------~~~~~~~~~---~~g~~~---v~~~~~~~~~~~   79 (208)
                      .|.++||+||++++|...++.+...|++|++++++            .++.+.+.+   ..+...   ..|..+..++.+
T Consensus         9 ~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~   88 (287)
T 3pxx_A            9 QDKVVLVTGGARGQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEVEKTGRKAYTAEVDVRDRAAVSR   88 (287)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHTTSCEEEEECCTTCHHHHHH
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcccccccccccchhhhHHHHHHHHHHHhcCCceEEEEccCCCHHHHHH
Confidence            57899999999999999999999999999999876            444443322   334322   234444323333


Q ss_pred             HHHhHCC--CCccEEEeCCCc-h--------h---------------HHHHHHhhccCCEEEEEeccc
Q 028523           80 ALKRYFP--EGINIYFENVGG-K--------M---------------LDAVLLNMRIQGRITLCGMIS  121 (208)
Q Consensus        80 ~~~~~~~--~~~d~v~d~~g~-~--------~---------------~~~~~~~l~~~G~~v~~g~~~  121 (208)
                      .+.+...  +++|+++++.|. .        .               .+.+++.|..+|+++.++...
T Consensus        89 ~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~  156 (287)
T 3pxx_A           89 ELANAVAEFGKLDVVVANAGICPLGAHLPVQAFADAFDVDFVGVINTVHAALPYLTSGASIITTGSVA  156 (287)
T ss_dssp             HHHHHHHHHSCCCEEEECCCCCCCCTTCCTHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEECCHH
T ss_pred             HHHHHHHHcCCCCEEEECCCcCcccCcCCHHHHHHHhhhhhhhhHHHHHHHHHHhhcCcEEEEeccch
Confidence            3333322  269999999873 1        1               233445566789999988653

>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*

Probab=98.31  E-value=2.9e-06  Score=62.11  Aligned_cols=105  Identities=22%  Similarity=0.328  Sum_probs=69.5

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhc---CCCe---eEecCCCccHHHHHHhHCC--CCc
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKF---GFDE---AFNYKEEPDLDAALKRYFP--EGI   89 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~---g~~~---v~~~~~~~~~~~~~~~~~~--~~~   89 (208)
                      .+.++||+||+|++|.+.++.+...|++|+++++++++.+.+.+++   |...   ..|..+.+.+.+.+.+...  +++
T Consensus         6 ~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~i   85 (247)
T 2jah_A            6 QGKVALITGASSGIGEATARALAAEGAAVAIAARRVEKLRALGDELTAAGAKVHVLELDVADRQGVDAAVASTVEALGGL   85 (247)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence            4689999999999999999998889999999999988766554333   4322   2344443233333333221  369


Q ss_pred             cEEEeCCCc-h----------h---------------HHHHHHhh-ccCCEEEEEecccc
Q 028523           90 NIYFENVGG-K----------M---------------LDAVLLNM-RIQGRITLCGMISQ  122 (208)
Q Consensus        90 d~v~d~~g~-~----------~---------------~~~~~~~l-~~~G~~v~~g~~~~  122 (208)
                      |++|++.|. .          .               .+.+++.| +.+|+++.+++..+
T Consensus        86 d~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~g~iv~isS~~~  145 (247)
T 2jah_A           86 DILVNNAGIMLLGPVEDADTTDWTRMIDTNLLGLMYMTRAALPHLLRSKGTVVQMSSIAG  145 (247)
T ss_dssp             SEEEECCCCCCCCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGG
T ss_pred             CEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCCCEEEEEccHHh
Confidence            999998872 1          0               12334444 23599999987654

>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A

Probab=98.31  E-value=6.5e-06  Score=60.19  Aligned_cols=80  Identities=11%  Similarity=0.128  Sum_probs=55.6

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCC---Ce--eEecCCCccHHHHHHhHCC--CCcc
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGF---DE--AFNYKEEPDLDAALKRYFP--EGIN   90 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~---~~--v~~~~~~~~~~~~~~~~~~--~~~d   90 (208)
                      ++.+++|+||+|++|...++.+...|++|+++++++++.+.+.+++..   ..  ..|..+.+.+.+.+.....  +++|
T Consensus         5 ~~k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   84 (251)
T 1zk4_A            5 DGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGTPDQIQFFQHDSSDEDGWTKLFDATEKAFGPVS   84 (251)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHSSCC
T ss_pred             CCcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhccCceEEEECCCCCHHHHHHHHHHHHHHhCCCC
Confidence            468899999999999999998888999999999998877665534432   12  2344443223333332211  2699


Q ss_pred             EEEeCCC
Q 028523           91 IYFENVG   97 (208)
Q Consensus        91 ~v~d~~g   97 (208)
                      ++|++.|
T Consensus        85 ~li~~Ag   91 (251)
T 1zk4_A           85 TLVNNAG   91 (251)
T ss_dssp             EEEECCC
T ss_pred             EEEECCC
Confidence            9999887

>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2

Probab=98.31  E-value=2.1e-06  Score=63.13  Aligned_cols=105  Identities=19%  Similarity=0.164  Sum_probs=70.8

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCe---eEecCCCccHHHHHHhHCC--CCccEE
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDE---AFNYKEEPDLDAALKRYFP--EGINIY   92 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~---v~~~~~~~~~~~~~~~~~~--~~~d~v   92 (208)
                      .+.++||+||+|++|...++.+...|++|+++++++++.+.+.++++...   ..|..+.+++.+.+.....  +++|++
T Consensus         5 ~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~l   84 (253)
T 1hxh_A            5 QGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAELGERSMFVRHDVSSEADWTLVMAAVQRRLGTLNVL   84 (253)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHCTTEEEECCCTTCHHHHHHHHHHHHHHHCSCCEE
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            46889999999999999999888889999999999888776654665432   2344443233333333211  268999


Q ss_pred             EeCCCc-h-------------------------hHHHHHHhhcc-CCEEEEEecccc
Q 028523           93 FENVGG-K-------------------------MLDAVLLNMRI-QGRITLCGMISQ  122 (208)
Q Consensus        93 ~d~~g~-~-------------------------~~~~~~~~l~~-~G~~v~~g~~~~  122 (208)
                      |++.|. .                         .....++.|.. +|+++.+++...
T Consensus        85 v~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~g~iv~isS~~~  141 (253)
T 1hxh_A           85 VNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKETGGSIINMASVSS  141 (253)
T ss_dssp             EECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTCEEEEEECCGGG
T ss_pred             EECCCCCCCCCcccCCHHHHHHHHHhhcHHHHHHHHHHHHHHHHcCCEEEEEcchhh
Confidence            999872 1                         01233444533 589999987654

>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2

Probab=98.30  E-value=3e-06  Score=62.79  Aligned_cols=80  Identities=14%  Similarity=0.193  Sum_probs=55.7

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhc-----CCCe---eEecCCCccHHHHHHhHCC--C
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKF-----GFDE---AFNYKEEPDLDAALKRYFP--E   87 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~-----g~~~---v~~~~~~~~~~~~~~~~~~--~   87 (208)
                      .+.++||+||+|++|...++.+...|++|+++++++++.+.+.+++     +...   ..|..+.+++.+.+.+...  +
T Consensus        12 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g   91 (267)
T 1iy8_A           12 TDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATTERFG   91 (267)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            5789999999999999999988889999999999988766544333     4322   2344443233333333221  2


Q ss_pred             CccEEEeCCC
Q 028523           88 GINIYFENVG   97 (208)
Q Consensus        88 ~~d~v~d~~g   97 (208)
                      ++|++|++.|
T Consensus        92 ~id~lv~nAg  101 (267)
T 1iy8_A           92 RIDGFFNNAG  101 (267)
T ss_dssp             CCSEEEECCC
T ss_pred             CCCEEEECCC
Confidence            6999999987

>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*

Probab=98.30  E-value=3e-06  Score=62.59  Aligned_cols=80  Identities=19%  Similarity=0.283  Sum_probs=55.8

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhc----CCCe---eEecCCCccHHHHHHhHCC--CC
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKF----GFDE---AFNYKEEPDLDAALKRYFP--EG   88 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~----g~~~---v~~~~~~~~~~~~~~~~~~--~~   88 (208)
                      ++.++||+||+|++|...++.+...|++|+++++++++.+.+.+++    +...   ..|..+.+++.+.+.+...  ++
T Consensus         6 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   85 (263)
T 3ai3_A            6 SGKVAVITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLKEKFGVRVLEVAVDVATPEGVDAVVESVRSSFGG   85 (263)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTSHHHHHHHHHHHHHHHSS
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            4688999999999999999998889999999999988766544333    4322   2344443233333332221  26


Q ss_pred             ccEEEeCCC
Q 028523           89 INIYFENVG   97 (208)
Q Consensus        89 ~d~v~d~~g   97 (208)
                      +|++|++.|
T Consensus        86 id~lv~~Ag   94 (263)
T 3ai3_A           86 ADILVNNAG   94 (263)
T ss_dssp             CSEEEECCC
T ss_pred             CCEEEECCC
Confidence            999999987

>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*

Probab=98.30  E-value=2.7e-06  Score=63.32  Aligned_cols=80  Identities=8%  Similarity=0.091  Sum_probs=54.1

Q ss_pred             CCCEEEEecCC--chHHHHHHHHHHHcCCEEEEEeCCHH---HHHHHHHhcCCCe--eEecCCCccHHHHHHhHC--CCC
Q 028523           18 QGEYVFVSAAS--GAVGQLVGQFAKLVGCYVVGSAGSKD---KVDLLKNKFGFDE--AFNYKEEPDLDAALKRYF--PEG   88 (208)
Q Consensus        18 ~g~~vli~ga~--g~vG~~a~qla~~~g~~v~~~~~s~~---~~~~~~~~~g~~~--v~~~~~~~~~~~~~~~~~--~~~   88 (208)
                      .+.++||+||+  |++|...++.+...|++|++++++++   ..+.+.++.+...  ..|..+.+.+.+.+.+..  -++
T Consensus         5 ~~k~vlVTGas~~~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~   84 (275)
T 2pd4_A            5 KGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNESLEKRVRPIAQELNSPYVYELDVSKEEHFKSLYNSVKKDLGS   84 (275)
T ss_dssp             TTCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHTSC
T ss_pred             CCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            47899999998  99999999988888999999998875   3444442344322  234444323333333321  136


Q ss_pred             ccEEEeCCC
Q 028523           89 INIYFENVG   97 (208)
Q Consensus        89 ~d~v~d~~g   97 (208)
                      +|++|++.|
T Consensus        85 id~lv~nAg   93 (275)
T 2pd4_A           85 LDFIVHSVA   93 (275)
T ss_dssp             EEEEEECCC
T ss_pred             CCEEEECCc
Confidence            999999987

>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}

Probab=98.30  E-value=2.2e-06  Score=63.96  Aligned_cols=105  Identities=18%  Similarity=0.283  Sum_probs=71.8

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCe---eEecCCCccHHHHHHhHCC--CCccEE
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDE---AFNYKEEPDLDAALKRYFP--EGINIY   92 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~---v~~~~~~~~~~~~~~~~~~--~~~d~v   92 (208)
                      .+.++||+||+|++|...++.+...|++|++++++.++.+.+.++++...   ..|..+...+...+.+...  +++|++
T Consensus         4 ~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~id~l   83 (281)
T 3m1a_A            4 SAKVWLVTGASSGFGRAIAEAAVAAGDTVIGTARRTEALDDLVAAYPDRAEAISLDVTDGERIDVVAADVLARYGRVDVL   83 (281)
T ss_dssp             CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHCTTTEEEEECCTTCHHHHHHHHHHHHHHHSCCSEE
T ss_pred             CCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccCCceEEEeeCCCHHHHHHHHHHHHHhCCCCCEE
Confidence            46789999999999999999998999999999999988777664665432   2344443233333333221  269999


Q ss_pred             EeCCCc-h----------h---------------HHHHHHhhcc--CCEEEEEecccc
Q 028523           93 FENVGG-K----------M---------------LDAVLLNMRI--QGRITLCGMISQ  122 (208)
Q Consensus        93 ~d~~g~-~----------~---------------~~~~~~~l~~--~G~~v~~g~~~~  122 (208)
                      |++.|. .          .               ...+++.|+.  .|+++.+++...
T Consensus        84 v~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~iv~~sS~~~  141 (281)
T 3m1a_A           84 VNNAGRTQVGAFEETTERELRDLFELHVFGPARLTRALLPQMRERGSGSVVNISSFGG  141 (281)
T ss_dssp             EECCCCEEECCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGG
T ss_pred             EECCCcCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEcCccc
Confidence            999872 1          0               2334444433  589999987654

>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}

Probab=98.30  E-value=4.2e-06  Score=62.44  Aligned_cols=78  Identities=19%  Similarity=0.165  Sum_probs=58.3

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCe---eEecCCCccHHHHHHhHCC-CCccEEE
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDE---AFNYKEEPDLDAALKRYFP-EGINIYF   93 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~---v~~~~~~~~~~~~~~~~~~-~~~d~v~   93 (208)
                      .|.++||+||++++|.+.++.+...|++|++++++.++.+.+.++++...   ..|..+.+++.+.+..... +++|+++
T Consensus        29 ~~k~vlVTGas~GIG~aia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~id~lv  108 (281)
T 3ppi_A           29 EGASAIVSGGAGGLGEATVRRLHADGLGVVIADLAAEKGKALADELGNRAEFVSTNVTSEDSVLAAIEAANQLGRLRYAV  108 (281)
T ss_dssp             TTEEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHTTSSEEEEEE
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHhCCCCeEE
Confidence            47889999999999999999888899999999999998887776776532   2344444234444444422 2689999


Q ss_pred             eC
Q 028523           94 EN   95 (208)
Q Consensus        94 d~   95 (208)
                      .+
T Consensus       109 ~~  110 (281)
T 3ppi_A          109 VA  110 (281)
T ss_dssp             EC
T ss_pred             Ec
Confidence            88

>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A*

Probab=98.29  E-value=2.7e-06  Score=62.84  Aligned_cols=80  Identities=15%  Similarity=0.194  Sum_probs=56.6

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCC-e--eEecCCCccHHHHHHhHCC--CCccEE
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFD-E--AFNYKEEPDLDAALKRYFP--EGINIY   92 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~-~--v~~~~~~~~~~~~~~~~~~--~~~d~v   92 (208)
                      .+.++||+||+|++|...++.+...|++|+++++++++.+.+.++++.. .  ..|..+.+++.+.+.+...  +++|++
T Consensus         6 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~iD~l   85 (260)
T 1nff_A            6 TGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELADAARYVHLDVTQPAQWKAAVDTAVTAFGGLHVL   85 (260)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhcCceEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            4788999999999999999988889999999999988777665455322 1  2344443233333333221  269999


Q ss_pred             EeCCC
Q 028523           93 FENVG   97 (208)
Q Consensus        93 ~d~~g   97 (208)
                      |++.|
T Consensus        86 v~~Ag   90 (260)
T 1nff_A           86 VNNAG   90 (260)
T ss_dssp             EECCC
T ss_pred             EECCC
Confidence            99887

>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa}

Probab=98.29  E-value=5.9e-06  Score=61.44  Aligned_cols=78  Identities=13%  Similarity=0.254  Sum_probs=56.1

Q ss_pred             CEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCC--C-e--eEecCCCccHHHHHHhHCC--CCccEE
Q 028523           20 EYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGF--D-E--AFNYKEEPDLDAALKRYFP--EGINIY   92 (208)
Q Consensus        20 ~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~--~-~--v~~~~~~~~~~~~~~~~~~--~~~d~v   92 (208)
                      .++||+||+|++|.+.++.+...|++|+++++++++.+.+.+++..  . .  ..|..+.+.+.+.+.+...  +++|++
T Consensus        22 k~vlVTGas~gIG~aia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~l  101 (272)
T 2nwq_A           22 STLFITGATSGFGEACARRFAEAGWSLVLTGRREERLQALAGELSAKTRVLPLTLDVRDRAAMSAAVDNLPEEFATLRGL  101 (272)
T ss_dssp             CEEEESSTTTSSHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHTCCGGGSSCCEE
T ss_pred             cEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhCCCCEE
Confidence            7899999999999999999888999999999998887766545532  1 1  2344443233334443322  268999


Q ss_pred             EeCCC
Q 028523           93 FENVG   97 (208)
Q Consensus        93 ~d~~g   97 (208)
                      |++.|
T Consensus       102 vnnAG  106 (272)
T 2nwq_A          102 INNAG  106 (272)
T ss_dssp             EECCC
T ss_pred             EECCC
Confidence            99887

>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*

Probab=98.29  E-value=3.2e-06  Score=62.97  Aligned_cols=80  Identities=15%  Similarity=0.287  Sum_probs=55.7

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhc---CCCe---eEecCCCccHHHHHHhHC--CCCc
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKF---GFDE---AFNYKEEPDLDAALKRYF--PEGI   89 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~---g~~~---v~~~~~~~~~~~~~~~~~--~~~~   89 (208)
                      ++.++||+||+|++|...++.+...|++|+++++++++.+.+.+++   |...   ..|..+.+++.+.+.+..  -+++
T Consensus        21 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i  100 (277)
T 2rhc_B           21 DSEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVPEIEALVAAVVERYGPV  100 (277)
T ss_dssp             TSCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTCSC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHhCCC
Confidence            4689999999999999999999889999999999988765543333   4322   234444323333333221  1369


Q ss_pred             cEEEeCCC
Q 028523           90 NIYFENVG   97 (208)
Q Consensus        90 d~v~d~~g   97 (208)
                      |++|++.|
T Consensus       101 D~lv~~Ag  108 (277)
T 2rhc_B          101 DVLVNNAG  108 (277)
T ss_dssp             SEEEECCC
T ss_pred             CEEEECCC
Confidence            99999987

>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0

Probab=98.29  E-value=4.5e-06  Score=62.24  Aligned_cols=106  Identities=16%  Similarity=0.213  Sum_probs=68.9

Q ss_pred             CCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeC-------------CHHHHHHHHH---hcCCCe---eEecCCCccH
Q 028523           17 KQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAG-------------SKDKVDLLKN---KFGFDE---AFNYKEEPDL   77 (208)
Q Consensus        17 ~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~-------------s~~~~~~~~~---~~g~~~---v~~~~~~~~~   77 (208)
                      -.|+++||+||++++|.+.++.+...|++|+++++             ++++.+.+.+   ..|...   ..|..+.+++
T Consensus        13 l~gk~~lVTGas~gIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v   92 (280)
T 3pgx_A           13 LQGRVAFITGAARGQGRSHAVRLAAEGADIIACDICAPVSASVTYAPASPEDLDETARLVEDQGRKALTRVLDVRDDAAL   92 (280)
T ss_dssp             TTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHH
T ss_pred             cCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHH
Confidence            46789999999999999999999899999999987             5555554432   234322   2355443233


Q ss_pred             HHHHHhHCC--CCccEEEeCCCc-h----------h---------------HHHHHHhhcc---CCEEEEEecccc
Q 028523           78 DAALKRYFP--EGINIYFENVGG-K----------M---------------LDAVLLNMRI---QGRITLCGMISQ  122 (208)
Q Consensus        78 ~~~~~~~~~--~~~d~v~d~~g~-~----------~---------------~~~~~~~l~~---~G~~v~~g~~~~  122 (208)
                      .+.+.+...  +++|+++++.|. .          .               .+.+++.|..   +|+++.+++...
T Consensus        93 ~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~  168 (280)
T 3pgx_A           93 RELVADGMEQFGRLDVVVANAGVLSWGRVWELTDEQWDTVIGVNLTGTWRTLRATVPAMIEAGNGGSIVVVSSSAG  168 (280)
T ss_dssp             HHHHHHHHHHHCCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGG
T ss_pred             HHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCEEEEEcchhh
Confidence            333333221  269999999872 1          0               2334444432   689999987654

>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}

Probab=98.29  E-value=3.2e-06  Score=62.34  Aligned_cols=105  Identities=17%  Similarity=0.181  Sum_probs=66.8

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEE-eCCHHHHHHHHH---hcCCCe---eEecCCCccHHHHHHhHCC--CC
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGS-AGSKDKVDLLKN---KFGFDE---AFNYKEEPDLDAALKRYFP--EG   88 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~-~~s~~~~~~~~~---~~g~~~---v~~~~~~~~~~~~~~~~~~--~~   88 (208)
                      .|.++||+||++++|.+.++.+...|++|+++ .++++..+.+.+   +.|...   ..|..+.++..+.+.+...  ++
T Consensus         7 ~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   86 (259)
T 3edm_A            7 TNRTIVVAGAGRDIGRACAIRFAQEGANVVLTYNGAAEGAATAVAEIEKLGRSALAIKADLTNAAEVEAAISAAADKFGE   86 (259)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSSCHHHHHHHHHHHTTTSCCEEEECCTTCHHHHHHHHHHHHHHHCS
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHhCC
Confidence            57899999999999999999988899999988 444444433322   334322   2344443233333333222  36


Q ss_pred             ccEEEeCCCch---------------------------hHHHHHHhhccCCEEEEEecccc
Q 028523           89 INIYFENVGGK---------------------------MLDAVLLNMRIQGRITLCGMISQ  122 (208)
Q Consensus        89 ~d~v~d~~g~~---------------------------~~~~~~~~l~~~G~~v~~g~~~~  122 (208)
                      +|+++++.|..                           ..+.+++.|.++|+++.+++...
T Consensus        87 id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~isS~~~  147 (259)
T 3edm_A           87 IHGLVHVAGGLIARKTIAEMDEAFWHQVLDVNLTSLFLTAKTALPKMAKGGAIVTFSSQAG  147 (259)
T ss_dssp             EEEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCHHH
T ss_pred             CCEEEECCCccCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCEEEEEcCHHh
Confidence            99999988621                           02334445666889999987543

>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}

Probab=98.29  E-value=3.1e-06  Score=62.11  Aligned_cols=80  Identities=16%  Similarity=0.224  Sum_probs=56.1

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhc-----C-C-Ce--eEecCCCccHHHHHHhHCC--
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKF-----G-F-DE--AFNYKEEPDLDAALKRYFP--   86 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~-----g-~-~~--v~~~~~~~~~~~~~~~~~~--   86 (208)
                      .+.++||+||++++|.+.++.+...|++|+++++++++.+.+.+++     + . ..  ..|..+.++..+.+.+...  
T Consensus         6 ~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   85 (250)
T 3nyw_A            6 QKGLAIITGASQGIGAVIAAGLATDGYRVVLIARSKQNLEKVHDEIMRSNKHVQEPIVLPLDITDCTKADTEIKDIHQKY   85 (250)
T ss_dssp             CCCEEEEESTTSHHHHHHHHHHHHHTCEEEEEESCHHHHHHHHHHHHHHCTTSCCCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhccccCcceEEeccCCCHHHHHHHHHHHHHhc
Confidence            5789999999999999999988888999999999988776655333     2 1 11  2344443233333333221  


Q ss_pred             CCccEEEeCCC
Q 028523           87 EGINIYFENVG   97 (208)
Q Consensus        87 ~~~d~v~d~~g   97 (208)
                      +++|+++++.|
T Consensus        86 g~iD~lvnnAg   96 (250)
T 3nyw_A           86 GAVDILVNAAA   96 (250)
T ss_dssp             CCEEEEEECCC
T ss_pred             CCCCEEEECCC
Confidence            36999999987

>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}

Probab=98.29  E-value=4e-06  Score=62.14  Aligned_cols=105  Identities=16%  Similarity=0.196  Sum_probs=66.9

Q ss_pred             CCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEe-CCHHHHHHHHH---hcCCCe---eEecCCCccHHHHHHhHCC--C
Q 028523           17 KQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSA-GSKDKVDLLKN---KFGFDE---AFNYKEEPDLDAALKRYFP--E   87 (208)
Q Consensus        17 ~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~-~s~~~~~~~~~---~~g~~~---v~~~~~~~~~~~~~~~~~~--~   87 (208)
                      ..++++||+||++++|.+.++.+...|++|++++ ++++..+.+.+   ..|...   ..|..+.+++.+.+.+...  +
T Consensus        25 ~~~k~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g  104 (267)
T 3u5t_A           25 ETNKVAIVTGASRGIGAAIAARLASDGFTVVINYAGKAAAAEEVAGKIEAAGGKALTAQADVSDPAAVRRLFATAEEAFG  104 (267)
T ss_dssp             --CCEEEEESCSSHHHHHHHHHHHHHTCEEEEEESSCSHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            3578999999999999999998888899999874 44444443332   334322   2344443233333333222  2


Q ss_pred             CccEEEeCCCc-h-------------------------hHHHHHHhhccCCEEEEEeccc
Q 028523           88 GINIYFENVGG-K-------------------------MLDAVLLNMRIQGRITLCGMIS  121 (208)
Q Consensus        88 ~~d~v~d~~g~-~-------------------------~~~~~~~~l~~~G~~v~~g~~~  121 (208)
                      ++|+++++.|. .                         ....+++.|+++|+++.++...
T Consensus       105 ~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~isS~~  164 (267)
T 3u5t_A          105 GVDVLVNNAGIMPLTTIAETGDAVFDRVIAVNLKGTFNTLREAAQRLRVGGRIINMSTSQ  164 (267)
T ss_dssp             CEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCTH
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCeEEEEeChh
Confidence            69999999872 1                         0234556667789999987653

>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}

Probab=98.29  E-value=1.2e-06  Score=64.58  Aligned_cols=80  Identities=19%  Similarity=0.160  Sum_probs=50.4

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCe---eEecCCCccHHHHHHhHCC--CCccEE
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDE---AFNYKEEPDLDAALKRYFP--EGINIY   92 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~---v~~~~~~~~~~~~~~~~~~--~~~d~v   92 (208)
                      .+.++||+||++++|.+.++.+...|++|+++++++++.+.+.++++...   ..|..+.++..+.+.+...  +++|++
T Consensus         6 ~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~l   85 (257)
T 3tpc_A            6 KSRVFIVTGASSGLGAAVTRMLAQEGATVLGLDLKPPAGEEPAAELGAAVRFRNADVTNEADATAALAFAKQEFGHVHGL   85 (257)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSCC------------CEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            57899999999999999999998999999999999887666554555422   2344443233333333222  269999


Q ss_pred             EeCCC
Q 028523           93 FENVG   97 (208)
Q Consensus        93 ~d~~g   97 (208)
                      +++.|
T Consensus        86 v~nAg   90 (257)
T 3tpc_A           86 VNCAG   90 (257)
T ss_dssp             EECCC
T ss_pred             EECCC
Confidence            99887

>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2

Probab=98.29  E-value=4.2e-06  Score=61.14  Aligned_cols=80  Identities=24%  Similarity=0.354  Sum_probs=56.7

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhc---CCCe---eEecCCCccHHHHHHhHC--CCCc
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKF---GFDE---AFNYKEEPDLDAALKRYF--PEGI   89 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~---g~~~---v~~~~~~~~~~~~~~~~~--~~~~   89 (208)
                      .+.+++|+||++++|...++.+...|++|+.+++++++.+.+.+++   +...   ..|..+.+++.+.+.+..  .+++
T Consensus         4 ~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   83 (247)
T 3lyl_A            4 NEKVALVTGASRGIGFEVAHALASKGATVVGTATSQASAEKFENSMKEKGFKARGLVLNISDIESIQNFFAEIKAENLAI   83 (247)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHTTCCC
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence            4688999999999999999988889999999999988766554333   4322   234444323333333332  2369


Q ss_pred             cEEEeCCC
Q 028523           90 NIYFENVG   97 (208)
Q Consensus        90 d~v~d~~g   97 (208)
                      |++|++.|
T Consensus        84 d~li~~Ag   91 (247)
T 3lyl_A           84 DILVNNAG   91 (247)
T ss_dssp             SEEEECCC
T ss_pred             CEEEECCC
Confidence            99999987

>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A*

Probab=98.28  E-value=4.2e-06  Score=61.35  Aligned_cols=77  Identities=19%  Similarity=0.365  Sum_probs=56.4

Q ss_pred             EEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCe---eEecCCCccHHHHHHhHCCC--CccEEEeC
Q 028523           21 YVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDE---AFNYKEEPDLDAALKRYFPE--GINIYFEN   95 (208)
Q Consensus        21 ~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~---v~~~~~~~~~~~~~~~~~~~--~~d~v~d~   95 (208)
                      +++|+||+|++|.+.++.+...|++|+++++++++.+.+.++++...   ..|..+.+++.+.+.+....  ++|++|++
T Consensus         2 ~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lvnn   81 (248)
T 3asu_A            2 IVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDELGDNLYIAQLDVRNRAAIEEMLASLPAEWCNIDILVNN   81 (248)
T ss_dssp             EEEETTTTSTTHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHTSCTTTCCCCEEEEC
T ss_pred             EEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCceEEEEcCCCCHHHHHHHHHHHHHhCCCCCEEEEC
Confidence            68999999999999999988899999999999888777665665322   23444432344444443332  69999998


Q ss_pred             CC
Q 028523           96 VG   97 (208)
Q Consensus        96 ~g   97 (208)
                      .|
T Consensus        82 Ag   83 (248)
T 3asu_A           82 AG   83 (248)
T ss_dssp             CC
T ss_pred             CC
Confidence            87

>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*

Probab=98.28  E-value=7.8e-06  Score=61.43  Aligned_cols=106  Identities=10%  Similarity=0.077  Sum_probs=69.8

Q ss_pred             CCCCEEEEecCCch--HHHHHHHHHHHcCCEEEEEeCCHHHHHHHH---HhcCCCe--eEecCCCccHHHHHHhHCC--C
Q 028523           17 KQGEYVFVSAASGA--VGQLVGQFAKLVGCYVVGSAGSKDKVDLLK---NKFGFDE--AFNYKEEPDLDAALKRYFP--E   87 (208)
Q Consensus        17 ~~g~~vli~ga~g~--vG~~a~qla~~~g~~v~~~~~s~~~~~~~~---~~~g~~~--v~~~~~~~~~~~~~~~~~~--~   87 (208)
                      -.|+++||+||+|+  +|.+.++.+...|++|++++++++..+.++   ++.+...  ..|..+.+++.+.+.+...  +
T Consensus        29 l~gk~~lVTGasg~~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g  108 (293)
T 3grk_A           29 LQGKRGLILGVANNRSIAWGIAKAAREAGAELAFTYQGDALKKRVEPLAEELGAFVAGHCDVADAASIDAVFETLEKKWG  108 (293)
T ss_dssp             TTTCEEEEECCCSSSSHHHHHHHHHHHTTCEEEEEECSHHHHHHHHHHHHHHTCEEEEECCTTCHHHHHHHHHHHHHHTS
T ss_pred             CCCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCceEEECCCCCHHHHHHHHHHHHHhcC
Confidence            45789999999955  999999998889999999998865433332   2344322  2344443233333333221  3


Q ss_pred             CccEEEeCCCc-h-----------------------------hHHHHHHhhccCCEEEEEecccc
Q 028523           88 GINIYFENVGG-K-----------------------------MLDAVLLNMRIQGRITLCGMISQ  122 (208)
Q Consensus        88 ~~d~v~d~~g~-~-----------------------------~~~~~~~~l~~~G~~v~~g~~~~  122 (208)
                      ++|++|++.|. .                             ..+.+++.|.++|+++.++....
T Consensus       109 ~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~Iv~isS~~~  173 (293)
T 3grk_A          109 KLDFLVHAIGFSDKDELTGRYIDTSEANFTNTMLISVYSLTAVSRRAEKLMADGGSILTLTYYGA  173 (293)
T ss_dssp             CCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTTTCEEEEEEECGGG
T ss_pred             CCCEEEECCccCCcccccccccccCHHHHHHHHHHHHHHHHHHHHHHHHhccCCCEEEEEeehhh
Confidence            69999999872 1                             02345566677899999987654

>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens}

Probab=98.28  E-value=3.5e-06  Score=62.26  Aligned_cols=80  Identities=15%  Similarity=0.221  Sum_probs=56.9

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCC-e--eEecCCCccHHHHHHhHCC--CCccEE
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFD-E--AFNYKEEPDLDAALKRYFP--EGINIY   92 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~-~--v~~~~~~~~~~~~~~~~~~--~~~d~v   92 (208)
                      .+.++||+||+|++|...++.+...|++|+++++++++.+.+.+++... .  ..|..+..++.+.+.+...  +++|++
T Consensus        11 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~v~~~~~~~~~~~g~iD~l   90 (263)
T 3ak4_A           11 SGRKAIVTGGSKGIGAAIARALDKAGATVAIADLDVMAAQAVVAGLENGGFAVEVDVTKRASVDAAMQKAIDALGGFDLL   90 (263)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTCTTCCEEEECCTTCHHHHHHHHHHHHHHHTCCCEE
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCCeEEEEeCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            4789999999999999999999889999999999988877665455321 1  2344443233333332221  269999


Q ss_pred             EeCCC
Q 028523           93 FENVG   97 (208)
Q Consensus        93 ~d~~g   97 (208)
                      |++.|
T Consensus        91 v~~Ag   95 (263)
T 3ak4_A           91 CANAG   95 (263)
T ss_dssp             EECCC
T ss_pred             EECCC
Confidence            99987

>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2

Probab=98.28  E-value=3.6e-06  Score=62.48  Aligned_cols=80  Identities=15%  Similarity=0.160  Sum_probs=56.9

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCe--eEecCCCccHHHHHHhHCC--CCccEEE
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDE--AFNYKEEPDLDAALKRYFP--EGINIYF   93 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~--v~~~~~~~~~~~~~~~~~~--~~~d~v~   93 (208)
                      ++.++||+||+|++|...++.+...|++|+++++++++.+.+.+++....  ..|..+.+++.+.+.+...  +++|++|
T Consensus         8 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lv   87 (270)
T 1yde_A            8 AGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQELPGAVFILCDVTQEDDVKTLVSETIRRFGRLDCVV   87 (270)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCTTEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCCeEEEcCCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence            57899999999999999999998899999999999888776664553222  2344443233333332211  3699999


Q ss_pred             eCCC
Q 028523           94 ENVG   97 (208)
Q Consensus        94 d~~g   97 (208)
                      ++.|
T Consensus        88 ~nAg   91 (270)
T 1yde_A           88 NNAG   91 (270)
T ss_dssp             ECCC
T ss_pred             ECCC
Confidence            9886

>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2

Probab=98.27  E-value=4.9e-06  Score=61.65  Aligned_cols=105  Identities=20%  Similarity=0.279  Sum_probs=67.4

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeC-CHHHHHHHHH---hcCCCe---eEecCCCccHHHHHHhHCC--CC
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAG-SKDKVDLLKN---KFGFDE---AFNYKEEPDLDAALKRYFP--EG   88 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~-s~~~~~~~~~---~~g~~~---v~~~~~~~~~~~~~~~~~~--~~   88 (208)
                      ++.++||+||+|++|...++.+...|++|+++++ ++++.+.+.+   +.+...   ..|..+.+.+.+.+.+...  ++
T Consensus        20 ~~k~vlItGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   99 (274)
T 1ja9_A           20 AGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADISKPSEVVALFDKAVSHFGG   99 (274)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence            5789999999999999999988889999999998 6665544332   234432   2344443233333332221  26


Q ss_pred             ccEEEeCCCch-----------h---------------HHHHHHhhccCCEEEEEecccc
Q 028523           89 INIYFENVGGK-----------M---------------LDAVLLNMRIQGRITLCGMISQ  122 (208)
Q Consensus        89 ~d~v~d~~g~~-----------~---------------~~~~~~~l~~~G~~v~~g~~~~  122 (208)
                      +|++|++.|..           .               .+.+++.+.++|+++.++....
T Consensus       100 ~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~iv~~sS~~~  159 (274)
T 1ja9_A          100 LDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRRGGRIILTSSIAA  159 (274)
T ss_dssp             EEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEEEEEEEEECCGGG
T ss_pred             CCEEEECCCCCCCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCEEEEEcChHh
Confidence            99999988721           0               1222344445689999987654

>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}

Probab=98.27  E-value=3.4e-06  Score=62.94  Aligned_cols=81  Identities=21%  Similarity=0.296  Sum_probs=55.3

Q ss_pred             CCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhc---CCCe---eEecCCCccHHHHHHhHCC--CC
Q 028523           17 KQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKF---GFDE---AFNYKEEPDLDAALKRYFP--EG   88 (208)
Q Consensus        17 ~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~---g~~~---v~~~~~~~~~~~~~~~~~~--~~   88 (208)
                      ..++++||+||++++|.+.++.+...|++|+++++++++.+.+.+++   |...   ..|..+.+++.+.+.+...  ++
T Consensus        22 ~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~  101 (279)
T 3sju_A           22 SRPQTAFVTGVSSGIGLAVARTLAARGIAVYGCARDAKNVSAAVDGLRAAGHDVDGSSCDVTSTDEVHAAVAAAVERFGP  101 (279)
T ss_dssp             ---CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHCS
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            46789999999999999999988888999999999988766554333   3322   2344443233333333222  36


Q ss_pred             ccEEEeCCC
Q 028523           89 INIYFENVG   97 (208)
Q Consensus        89 ~d~v~d~~g   97 (208)
                      +|++|++.|
T Consensus       102 id~lv~nAg  110 (279)
T 3sju_A          102 IGILVNSAG  110 (279)
T ss_dssp             CCEEEECCC
T ss_pred             CcEEEECCC
Confidence            999999987

>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}

Probab=98.27  E-value=3.1e-06  Score=62.57  Aligned_cols=104  Identities=13%  Similarity=0.162  Sum_probs=66.6

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHH---HHHHHHHhc---CCCe---eEecCCCccHHHHHHhHCC--
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKD---KVDLLKNKF---GFDE---AFNYKEEPDLDAALKRYFP--   86 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~---~~~~~~~~~---g~~~---v~~~~~~~~~~~~~~~~~~--   86 (208)
                      .|.++||+||++++|.+.++.+...|++|++++++..   +.+.+.+++   |...   ..|..+.++..+.+.+...  
T Consensus        10 ~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~   89 (262)
T 3ksu_A           10 KNKVIVIAGGIKNLGALTAKTFALESVNLVLHYHQAKDSDTANKLKDELEDQGAKVALYQSDLSNEEEVAKLFDFAEKEF   89 (262)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHTTSSCEEEEEESCGGGHHHHHHHHHHHHTTTCEEEEEECCCCSHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecCccCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHc
Confidence            5789999999999999999998889999999876543   333333232   3321   2344443233333333222  


Q ss_pred             CCccEEEeCCCch-----------h---------------HHHHHHhhccCCEEEEEeccc
Q 028523           87 EGINIYFENVGGK-----------M---------------LDAVLLNMRIQGRITLCGMIS  121 (208)
Q Consensus        87 ~~~d~v~d~~g~~-----------~---------------~~~~~~~l~~~G~~v~~g~~~  121 (208)
                      +++|+++++.|..           .               .+.+++.|+++|+++.++...
T Consensus        90 g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~iv~isS~~  150 (262)
T 3ksu_A           90 GKVDIAINTVGKVLKKPIVETSEAEFDAMDTINNKVAYFFIKQAAKHMNPNGHIITIATSL  150 (262)
T ss_dssp             CSEEEEEECCCCCCSSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHTTEEEEEEEEEECCCH
T ss_pred             CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCEEEEEechh
Confidence            3699999998721           0               233445566789999987653

>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A*

Probab=98.27  E-value=7.7e-06  Score=60.20  Aligned_cols=80  Identities=15%  Similarity=0.206  Sum_probs=53.7

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeC-CHHHHHHHHHh---cCCCe---eEecCCCccHHHHHHhHCC--CC
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAG-SKDKVDLLKNK---FGFDE---AFNYKEEPDLDAALKRYFP--EG   88 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~-s~~~~~~~~~~---~g~~~---v~~~~~~~~~~~~~~~~~~--~~   88 (208)
                      ++.++||+||+|++|...++.+...|++|+++++ ++++.+.+.++   .+...   ..|..+.+++.+.+.+...  ++
T Consensus         6 ~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   85 (261)
T 1gee_A            6 EGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTVESDVINLVQSAIKEFGK   85 (261)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            4678999999999999999988888999999998 76665544323   24321   2344433223333333221  26


Q ss_pred             ccEEEeCCC
Q 028523           89 INIYFENVG   97 (208)
Q Consensus        89 ~d~v~d~~g   97 (208)
                      +|++|++.|
T Consensus        86 id~li~~Ag   94 (261)
T 1gee_A           86 LDVMINNAG   94 (261)
T ss_dssp             CCEEEECCC
T ss_pred             CCEEEECCC
Confidence            999999887

>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*

Probab=98.27  E-value=2.6e-06  Score=62.87  Aligned_cols=80  Identities=14%  Similarity=0.120  Sum_probs=57.1

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCe---eEecCCCccHHHHHHhHCC--CCccEE
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDE---AFNYKEEPDLDAALKRYFP--EGINIY   92 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~---v~~~~~~~~~~~~~~~~~~--~~~d~v   92 (208)
                      ++.+++|+||+|++|...++.+...|++|++++++.++.+.+.++++...   ..|..+.+.+.+.+.+...  +++|++
T Consensus        11 ~~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~l   90 (265)
T 2o23_A           11 KGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKLGNNCVFAPADVTSEKDVQTALALAKGKFGRVDVA   90 (265)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSSHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCcHhHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHHCCCCCEE
Confidence            57899999999999999999998899999999998877766654665432   2344443233333332221  269999


Q ss_pred             EeCCC
Q 028523           93 FENVG   97 (208)
Q Consensus        93 ~d~~g   97 (208)
                      |++.|
T Consensus        91 i~~Ag   95 (265)
T 2o23_A           91 VNCAG   95 (265)
T ss_dssp             EECCC
T ss_pred             EECCc
Confidence            99886

>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=98.27  E-value=2.2e-06  Score=63.31  Aligned_cols=80  Identities=21%  Similarity=0.297  Sum_probs=56.0

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhc---CC-C-e--eEecCCCccHHHHHHhHCC--CC
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKF---GF-D-E--AFNYKEEPDLDAALKRYFP--EG   88 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~---g~-~-~--v~~~~~~~~~~~~~~~~~~--~~   88 (208)
                      .|.++||+||++++|.+.++.+...|++|+++++++++.+.+.+++   +. . .  ..|..+..++.+.+.+...  ++
T Consensus         9 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   88 (262)
T 3pk0_A            9 QGRSVVVTGGTKGIGRGIATVFARAGANVAVAGRSTADIDACVADLDQLGSGKVIGVQTDVSDRAQCDALAGRAVEEFGG   88 (262)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTSSSCEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCcEEEEEcCCCCHHHHHHHHHHHHHHhCC
Confidence            5789999999999999999999899999999999988766554333   31 1 1  2344443233333333222  26


Q ss_pred             ccEEEeCCC
Q 028523           89 INIYFENVG   97 (208)
Q Consensus        89 ~d~v~d~~g   97 (208)
                      +|+++++.|
T Consensus        89 id~lvnnAg   97 (262)
T 3pk0_A           89 IDVVCANAG   97 (262)
T ss_dssp             CSEEEECCC
T ss_pred             CCEEEECCC
Confidence            999999987

>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*

Probab=98.27  E-value=1.4e-05  Score=57.31  Aligned_cols=97  Identities=8%  Similarity=0.056  Sum_probs=65.0

Q ss_pred             CEEEEecCCchHHHHHHHHHH-HcCCEEEEEeCCHH-HHHHHHHhcCCC-ee--EecCCCccHHHHHHhHCCCCccEEEe
Q 028523           20 EYVFVSAASGAVGQLVGQFAK-LVGCYVVGSAGSKD-KVDLLKNKFGFD-EA--FNYKEEPDLDAALKRYFPEGINIYFE   94 (208)
Q Consensus        20 ~~vli~ga~g~vG~~a~qla~-~~g~~v~~~~~s~~-~~~~~~~~~g~~-~v--~~~~~~~~~~~~~~~~~~~~~d~v~d   94 (208)
                      .+|+|+||+|++|...++.+. ..|++|++++++++ +.+.+. ..+.. .+  .|..+.    +.+.+... ++|++|+
T Consensus         6 k~vlVtGasg~iG~~~~~~l~~~~g~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~D~~d~----~~~~~~~~-~~d~vv~   79 (221)
T 3r6d_A            6 XYITILGAAGQIAQXLTATLLTYTDMHITLYGRQLKTRIPPEI-IDHERVTVIEGSFQNP----GXLEQAVT-NAEVVFV   79 (221)
T ss_dssp             SEEEEESTTSHHHHHHHHHHHHHCCCEEEEEESSHHHHSCHHH-HTSTTEEEEECCTTCH----HHHHHHHT-TCSEEEE
T ss_pred             EEEEEEeCCcHHHHHHHHHHHhcCCceEEEEecCccccchhhc-cCCCceEEEECCCCCH----HHHHHHHc-CCCEEEE
Confidence            469999999999999988887 89999999999988 665553 22322 22  244332    22232222 5899999


Q ss_pred             CCCchh--HHHHHHhhcc--CCEEEEEecccc
Q 028523           95 NVGGKM--LDAVLLNMRI--QGRITLCGMISQ  122 (208)
Q Consensus        95 ~~g~~~--~~~~~~~l~~--~G~~v~~g~~~~  122 (208)
                      +.|...  ....++.+..  .|+++.++....
T Consensus        80 ~ag~~n~~~~~~~~~~~~~~~~~iv~iSs~~~  111 (221)
T 3r6d_A           80 GAMESGSDMASIVKALSRXNIRRVIGVSMAGL  111 (221)
T ss_dssp             SCCCCHHHHHHHHHHHHHTTCCEEEEEEETTT
T ss_pred             cCCCCChhHHHHHHHHHhcCCCeEEEEeecee
Confidence            998521  4455555544  368998887553

>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}

Probab=98.26  E-value=3.7e-06  Score=61.67  Aligned_cols=81  Identities=17%  Similarity=0.236  Sum_probs=56.6

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhc---CCCe---eEecCCCccHHHHHHhHCC--CCc
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKF---GFDE---AFNYKEEPDLDAALKRYFP--EGI   89 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~---g~~~---v~~~~~~~~~~~~~~~~~~--~~~   89 (208)
                      .++++||+||++++|...++.+...|++|+++++++++.+.+.+++   +...   ..|..+.+++...+.+...  +++
T Consensus         8 ~~k~vlITGas~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   87 (253)
T 3qiv_A            8 ENKVGIVTGSGGGIGQAYAEALAREGAAVVVADINAEAAEAVAKQIVADGGTAISVAVDVSDPESAKAMADRTLAEFGGI   87 (253)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            5789999999999999999999899999999999988776655333   3321   2344443223333332221  269


Q ss_pred             cEEEeCCCc
Q 028523           90 NIYFENVGG   98 (208)
Q Consensus        90 d~v~d~~g~   98 (208)
                      |++|++.|.
T Consensus        88 d~li~~Ag~   96 (253)
T 3qiv_A           88 DYLVNNAAI   96 (253)
T ss_dssp             CEEEECCCC
T ss_pred             CEEEECCCc
Confidence            999999873

>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}

Probab=98.26  E-value=2.7e-06  Score=62.48  Aligned_cols=103  Identities=19%  Similarity=0.202  Sum_probs=69.8

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhc---CCCe---eEecCCCccHHH---HHHhHCCCC
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKF---GFDE---AFNYKEEPDLDA---ALKRYFPEG   88 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~---g~~~---v~~~~~~~~~~~---~~~~~~~~~   88 (208)
                      ++.++||+||++++|.+.++.+...|++|+++++++++.+.+.+++   |...   ..|..+.+++..   .+.+.  ++
T Consensus         6 ~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~--g~   83 (252)
T 3h7a_A            6 RNATVAVIGAGDYIGAEIAKKFAAEGFTVFAGRRNGEKLAPLVAEIEAAGGRIVARSLDARNEDEVTAFLNAADAH--AP   83 (252)
T ss_dssp             CSCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHH--SC
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECcCCCHHHHHHHHHHHHhh--CC
Confidence            5789999999999999999999889999999999988766554333   4321   234444322322   33333  57


Q ss_pred             ccEEEeCCCc-h----------h---------------HHHHHHhhcc--CCEEEEEecccc
Q 028523           89 INIYFENVGG-K----------M---------------LDAVLLNMRI--QGRITLCGMISQ  122 (208)
Q Consensus        89 ~d~v~d~~g~-~----------~---------------~~~~~~~l~~--~G~~v~~g~~~~  122 (208)
                      +|+++++.|. .          .               .+.+++.|..  +|+++.+++..+
T Consensus        84 id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~  145 (252)
T 3h7a_A           84 LEVTIFNVGANVNFPILETTDRVFRKVWEMACWAGFVSGRESARLMLAHGQGKIFFTGATAS  145 (252)
T ss_dssp             EEEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEGGG
T ss_pred             ceEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECCHHH
Confidence            9999999882 1          0               1234444533  589999987654

>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}

Probab=98.26  E-value=4.1e-06  Score=62.04  Aligned_cols=80  Identities=20%  Similarity=0.340  Sum_probs=57.3

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHh----cCCCe---eEecCCCccHHHHHHhHCC--CC
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNK----FGFDE---AFNYKEEPDLDAALKRYFP--EG   88 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~----~g~~~---v~~~~~~~~~~~~~~~~~~--~~   88 (208)
                      .|.++||+||++++|.+.++.+...|++|+++++++++.+.+.++    .+...   ..|..+.++..+.+.+...  ++
T Consensus        19 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   98 (266)
T 4egf_A           19 DGKRALITGATKGIGADIARAFAAAGARLVLSGRDVSELDAARRALGEQFGTDVHTVAIDLAEPDAPAELARRAAEAFGG   98 (266)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTSTTHHHHHHHHHHHHHTS
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence            578999999999999999999999999999999998876655433    34322   2455554234333333322  26


Q ss_pred             ccEEEeCCC
Q 028523           89 INIYFENVG   97 (208)
Q Consensus        89 ~d~v~d~~g   97 (208)
                      +|+++++.|
T Consensus        99 id~lv~nAg  107 (266)
T 4egf_A           99 LDVLVNNAG  107 (266)
T ss_dssp             CSEEEEECC
T ss_pred             CCEEEECCC
Confidence            999999887

>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}

Probab=98.26  E-value=3.6e-06  Score=62.94  Aligned_cols=105  Identities=13%  Similarity=0.179  Sum_probs=71.0

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcC---CCe---eEecCCCccHHHHHHhHCC--CCc
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFG---FDE---AFNYKEEPDLDAALKRYFP--EGI   89 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g---~~~---v~~~~~~~~~~~~~~~~~~--~~~   89 (208)
                      ++.++||+||++++|.+.++.+...|++|++++++.++.+.+.+++.   ...   ..|..+..++.+.+.+...  +++
T Consensus        27 ~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i  106 (283)
T 3v8b_A           27 PSPVALITGAGSGIGRATALALAADGVTVGALGRTRTEVEEVADEIVGAGGQAIALEADVSDELQMRNAVRDLVLKFGHL  106 (283)
T ss_dssp             CCCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHTTTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence            57899999999999999999998899999999999888776654542   221   2344443233333333322  369


Q ss_pred             cEEEeCCCc--h-------------------------hHHHHHHhhc--cCCEEEEEecccc
Q 028523           90 NIYFENVGG--K-------------------------MLDAVLLNMR--IQGRITLCGMISQ  122 (208)
Q Consensus        90 d~v~d~~g~--~-------------------------~~~~~~~~l~--~~G~~v~~g~~~~  122 (208)
                      |+++++.|.  .                         ..+.+++.|.  .+|+++.+++..+
T Consensus       107 D~lVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~  168 (283)
T 3v8b_A          107 DIVVANAGINGVWAPIDDLKPFEWDETIAVNLRGTFLTLHLTVPYLKQRGGGAIVVVSSING  168 (283)
T ss_dssp             CEEEECCCCCCCBCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBT
T ss_pred             CEEEECCCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCceEEEEcChhh
Confidence            999998872  1                         0233444443  3689999987654

>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ...

Probab=98.26  E-value=3.4e-06  Score=62.54  Aligned_cols=80  Identities=13%  Similarity=0.251  Sum_probs=55.2

Q ss_pred             CCCEEEEecC--CchHHHHHHHHHHHcCCEEEEEeCCHHH-HHHHHHhcCCCe---eEecCCCccHHHHHHhH---CC--
Q 028523           18 QGEYVFVSAA--SGAVGQLVGQFAKLVGCYVVGSAGSKDK-VDLLKNKFGFDE---AFNYKEEPDLDAALKRY---FP--   86 (208)
Q Consensus        18 ~g~~vli~ga--~g~vG~~a~qla~~~g~~v~~~~~s~~~-~~~~~~~~g~~~---v~~~~~~~~~~~~~~~~---~~--   86 (208)
                      ++.++||+||  ++++|.+.++.+...|++|+++++++++ .+.+.++++...   ..|..+.+++.+.+.+.   .+  
T Consensus         6 ~~k~vlVTGa~~s~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~~   85 (269)
T 2h7i_A            6 DGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRITDRLPAKAPLLELDVQNEEHLASLAGRVTEAIGAG   85 (269)
T ss_dssp             TTCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEECSCHHHHHHHHTTSSSCCCEEECCTTCHHHHHHHHHHHHHHHCTT
T ss_pred             CCCEEEEECCCCCCchHHHHHHHHHHCCCEEEEEecChHHHHHHHHHhcCCCceEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence            5789999998  9999999999988899999999988765 355553555321   23554432233333322   22  


Q ss_pred             CCccEEEeCCC
Q 028523           87 EGINIYFENVG   97 (208)
Q Consensus        87 ~~~d~v~d~~g   97 (208)
                      +++|++|++.|
T Consensus        86 ~~iD~lv~nAg   96 (269)
T 2h7i_A           86 NKLDGVVHSIG   96 (269)
T ss_dssp             CCEEEEEECCC
T ss_pred             CCceEEEECCc
Confidence            16999999887

>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2

Probab=98.26  E-value=6e-06  Score=61.38  Aligned_cols=80  Identities=18%  Similarity=0.293  Sum_probs=55.9

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhc---CCCe---eEecCCCccHHHHH---HhHCCCC
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKF---GFDE---AFNYKEEPDLDAAL---KRYFPEG   88 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~---g~~~---v~~~~~~~~~~~~~---~~~~~~~   88 (208)
                      .+.++||+||+|++|.+.++.+...|++|+++++++++.+.+.+++   +...   ..|..+.+++.+.+   .+...++
T Consensus        20 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~   99 (273)
T 1ae1_A           20 KGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGLNVEGSVCDLLSRTERDKLMQTVAHVFDGK   99 (273)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTTSC
T ss_pred             CCCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence            5789999999999999999999889999999999988765543232   4322   23444432232222   2233257


Q ss_pred             ccEEEeCCC
Q 028523           89 INIYFENVG   97 (208)
Q Consensus        89 ~d~v~d~~g   97 (208)
                      +|+++++.|
T Consensus       100 id~lv~nAg  108 (273)
T 1ae1_A          100 LNILVNNAG  108 (273)
T ss_dssp             CCEEEECCC
T ss_pred             CcEEEECCC
Confidence            999999987

>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*

Probab=98.26  E-value=8.2e-06  Score=61.39  Aligned_cols=105  Identities=10%  Similarity=0.048  Sum_probs=69.5

Q ss_pred             CCCEEEEecCCc--hHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH---HhcCCCe--eEecCCCccHHHHHHhHCC--CC
Q 028523           18 QGEYVFVSAASG--AVGQLVGQFAKLVGCYVVGSAGSKDKVDLLK---NKFGFDE--AFNYKEEPDLDAALKRYFP--EG   88 (208)
Q Consensus        18 ~g~~vli~ga~g--~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~---~~~g~~~--v~~~~~~~~~~~~~~~~~~--~~   88 (208)
                      .|+++||+||+|  ++|.+.++.+...|++|++++++++..+.+.   ++.+...  ..|..+.+++.+.+.+...  ++
T Consensus        29 ~~k~vlVTGasg~~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~  108 (296)
T 3k31_A           29 EGKKGVIIGVANDKSLAWGIAKAVCAQGAEVALTYLSETFKKRVDPLAESLGVKLTVPCDVSDAESVDNMFKVLAEEWGS  108 (296)
T ss_dssp             TTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHHTCCEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEEeCCCCCCHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCCeEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            478999999987  9999999988889999999998875444333   1344333  2344443233333333322  36


Q ss_pred             ccEEEeCCCc-h--------------h---------------HHHHHHhhccCCEEEEEecccc
Q 028523           89 INIYFENVGG-K--------------M---------------LDAVLLNMRIQGRITLCGMISQ  122 (208)
Q Consensus        89 ~d~v~d~~g~-~--------------~---------------~~~~~~~l~~~G~~v~~g~~~~  122 (208)
                      +|++|++.|. .              .               .+.+++.|.++|+++.++....
T Consensus       109 iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~IV~isS~~~  172 (296)
T 3k31_A          109 LDFVVHAVAFSDKNELKGRYVDTSLGNFLTSMHISCYSFTYIASKAEPLMTNGGSILTLSYYGA  172 (296)
T ss_dssp             CSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEECGGG
T ss_pred             CCEEEECCCcCCcccccCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCEEEEEEehhh
Confidence            9999999872 1              0               1334445666899999987654

>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens}

Probab=98.26  E-value=5.9e-06  Score=63.59  Aligned_cols=104  Identities=19%  Similarity=0.267  Sum_probs=68.8

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHH-----------HHHHHHhcCCCe---eEecCCCccHHHHHHh
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDK-----------VDLLKNKFGFDE---AFNYKEEPDLDAALKR   83 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~-----------~~~~~~~~g~~~---v~~~~~~~~~~~~~~~   83 (208)
                      .|.++||+||++++|.+.++.+...|++|+++++++++           .+.++ ..|...   ..|..+.+.+.+.+.+
T Consensus        44 ~gk~vlVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~l~~~l~~~~~~~~-~~g~~~~~~~~Dv~d~~~v~~~~~~  122 (346)
T 3kvo_A           44 AGCTVFITGASRGIGKAIALKAAKDGANIVIAAKTAQPHPKLLGTIYTAAEEIE-AVGGKALPCIVDVRDEQQISAAVEK  122 (346)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHH-HTTCEEEEEECCTTCHHHHHHHHHH
T ss_pred             CCCEEEEeCCChHHHHHHHHHHHHCCCEEEEEECChhhhhhhHHHHHHHHHHHH-hcCCeEEEEEccCCCHHHHHHHHHH
Confidence            57899999999999999999888889999999988763           22333 445422   2355544233333333


Q ss_pred             HCC--CCccEEEeCCCc-h-------------------------hHHHHHHhhcc--CCEEEEEecccc
Q 028523           84 YFP--EGINIYFENVGG-K-------------------------MLDAVLLNMRI--QGRITLCGMISQ  122 (208)
Q Consensus        84 ~~~--~~~d~v~d~~g~-~-------------------------~~~~~~~~l~~--~G~~v~~g~~~~  122 (208)
                      ...  +++|++|++.|. .                         ..+.++..|..  +|+++.++....
T Consensus       123 ~~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~~~  191 (346)
T 3kvo_A          123 AIKKFGGIDILVNNASAISLTNTLDTPTKRLDLMMNVNTRGTYLASKACIPYLKKSKVAHILNISPPLN  191 (346)
T ss_dssp             HHHHHSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHTHHHHHHHHHHHHHHHTTCSSCEEEEECCCCC
T ss_pred             HHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCCCCEEEEECCHHH
Confidence            322  269999999883 1                         02344455544  489999987553

>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}

Probab=98.25  E-value=2.5e-06  Score=64.14  Aligned_cols=80  Identities=14%  Similarity=0.238  Sum_probs=56.5

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCC---Ce----eEecCCCccHHHHHHhHCC--CC
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGF---DE----AFNYKEEPDLDAALKRYFP--EG   88 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~---~~----v~~~~~~~~~~~~~~~~~~--~~   88 (208)
                      .|.++||+||++++|.+.++.+...|++|+++++++++.+.+.+++..   ..    ..|..+.+++.+.+.+...  ++
T Consensus        40 ~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~  119 (293)
T 3rih_A           40 SARSVLVTGGTKGIGRGIATVFARAGANVAVAARSPRELSSVTAELGELGAGNVIGVRLDVSDPGSCADAARTVVDAFGA  119 (293)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHTTSSSSCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhCCCcEEEEEEeCCCHHHHHHHHHHHHHHcCC
Confidence            578999999999999999999989999999999998876665544422   11    2344443233333333222  26


Q ss_pred             ccEEEeCCC
Q 028523           89 INIYFENVG   97 (208)
Q Consensus        89 ~d~v~d~~g   97 (208)
                      +|++|++.|
T Consensus       120 iD~lvnnAg  128 (293)
T 3rih_A          120 LDVVCANAG  128 (293)
T ss_dssp             CCEEEECCC
T ss_pred             CCEEEECCC
Confidence            999999887

>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}

Probab=98.25  E-value=8e-06  Score=61.40  Aligned_cols=105  Identities=11%  Similarity=0.090  Sum_probs=67.8

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCH--HHHHHHHH---hcCCCe---eEecCCCccHHHHHHhHCC--C
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSK--DKVDLLKN---KFGFDE---AFNYKEEPDLDAALKRYFP--E   87 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~--~~~~~~~~---~~g~~~---v~~~~~~~~~~~~~~~~~~--~   87 (208)
                      +|+++||+||++++|.+.++.+...|++|++++++.  +..+.+.+   +.|...   ..|..+...+.+.+.+...  +
T Consensus        48 ~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g  127 (294)
T 3r3s_A           48 KDRKALVTGGDSGIGRAAAIAYAREGADVAINYLPAEEEDAQQVKALIEECGRKAVLLPGDLSDESFARSLVHKAREALG  127 (294)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHTTCCEEECCCCTTSHHHHHHHHHHHHHHHT
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchhHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHHHHcC
Confidence            578999999999999999999989999999998762  23333221   345432   2344433123333332221  3


Q ss_pred             CccEEEeCCCc-h---h-----------------------HHHHHHhhccCCEEEEEecccc
Q 028523           88 GINIYFENVGG-K---M-----------------------LDAVLLNMRIQGRITLCGMISQ  122 (208)
Q Consensus        88 ~~d~v~d~~g~-~---~-----------------------~~~~~~~l~~~G~~v~~g~~~~  122 (208)
                      ++|+++++.|. .   .                       .+.+++.+.++|+++.++....
T Consensus       128 ~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~Iv~isS~~~  189 (294)
T 3r3s_A          128 GLDILALVAGKQTAIPEIKDLTSEQFQQTFAVNVFALFWITQEAIPLLPKGASIITTSSIQA  189 (294)
T ss_dssp             CCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEECCGGG
T ss_pred             CCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCCEEEEECChhh
Confidence            69999998872 1   0                       2334556677899999987654

>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A

Probab=98.25  E-value=4.5e-06  Score=61.32  Aligned_cols=106  Identities=13%  Similarity=0.141  Sum_probs=69.6

Q ss_pred             CCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhc----C-CCe--eEec--CCCccHHHHHHhHC--
Q 028523           17 KQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKF----G-FDE--AFNY--KEEPDLDAALKRYF--   85 (208)
Q Consensus        17 ~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~----g-~~~--v~~~--~~~~~~~~~~~~~~--   85 (208)
                      -.|+++||+||++++|.+.++.+...|++|+++++++++.+.+.+++    + ...  ..|.  .+..+..+.+.+..  
T Consensus        10 l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   89 (252)
T 3f1l_A           10 LNDRIILVTGASDGIGREAAMTYARYGATVILLGRNEEKLRQVASHINEETGRQPQWFILDLLTCTSENCQQLAQRIAVN   89 (252)
T ss_dssp             TTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSCCCEEEECCTTTCCHHHHHHHHHHHHHH
T ss_pred             cCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCCceEEEEecccCCHHHHHHHHHHHHHh
Confidence            36789999999999999999988889999999999988766554332    2 112  2343  32212333333221  


Q ss_pred             CCCccEEEeCCCc--h--h-----------------------HHHHHHhhc--cCCEEEEEecccc
Q 028523           86 PEGINIYFENVGG--K--M-----------------------LDAVLLNMR--IQGRITLCGMISQ  122 (208)
Q Consensus        86 ~~~~d~v~d~~g~--~--~-----------------------~~~~~~~l~--~~G~~v~~g~~~~  122 (208)
                      -+++|+++++.|.  .  .                       .+.+++.|.  .+|+++.+++...
T Consensus        90 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~  155 (252)
T 3f1l_A           90 YPRLDGVLHNAGLLGDVCPMSEQNPQVWQDVMQVNVNATFMLTQALLPLLLKSDAGSLVFTSSSVG  155 (252)
T ss_dssp             CSCCSEEEECCCCCCCCSCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGG
T ss_pred             CCCCCEEEECCccCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHCCCCEEEEECChhh
Confidence            2369999999873  1  0                       233445553  3689999987654

>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}

Probab=98.25  E-value=2.7e-06  Score=63.50  Aligned_cols=80  Identities=23%  Similarity=0.315  Sum_probs=56.6

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhc---CCCe---eEecCCCccHHHHHHhHCC--CCc
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKF---GFDE---AFNYKEEPDLDAALKRYFP--EGI   89 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~---g~~~---v~~~~~~~~~~~~~~~~~~--~~~   89 (208)
                      .|.++||+||++++|.+.++.+...|++|+++++++++.+.+.+++   +...   ..|..+.......+.+...  +++
T Consensus         7 ~gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i   86 (280)
T 3tox_A            7 EGKIAIVTGASSGIGRAAALLFAREGAKVVVTARNGNALAELTDEIAGGGGEAAALAGDVGDEALHEALVELAVRRFGGL   86 (280)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHTTTTCCEEECCCCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence            5789999999999999999998889999999999998877665454   2221   2344443223333332221  269


Q ss_pred             cEEEeCCC
Q 028523           90 NIYFENVG   97 (208)
Q Consensus        90 d~v~d~~g   97 (208)
                      |++|++.|
T Consensus        87 D~lvnnAg   94 (280)
T 3tox_A           87 DTAFNNAG   94 (280)
T ss_dssp             CEEEECCC
T ss_pred             CEEEECCC
Confidence            99999987

>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}

Probab=98.25  E-value=4.2e-06  Score=61.62  Aligned_cols=105  Identities=17%  Similarity=0.210  Sum_probs=69.9

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHh---cCCCe---eEecCCCccHHHHHHhHCC--CCc
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNK---FGFDE---AFNYKEEPDLDAALKRYFP--EGI   89 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~---~g~~~---v~~~~~~~~~~~~~~~~~~--~~~   89 (208)
                      .|.++||+||++++|.+.++.+...|++|++++++.++.+.+.++   .+...   ..|..+..+..+.+.+...  +++
T Consensus        11 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i   90 (256)
T 3gaf_A           11 NDAVAIVTGAAAGIGRAIAGTFAKAGASVVVTDLKSEGAEAVAAAIRQAGGKAIGLECNVTDEQHREAVIKAALDQFGKI   90 (256)
T ss_dssp             TTCEEEECSCSSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence            578999999999999999998888899999999998876655433   34322   2344443233333333222  269


Q ss_pred             cEEEeCCCc-h---------h---------------HHHHHHhhcc--CCEEEEEecccc
Q 028523           90 NIYFENVGG-K---------M---------------LDAVLLNMRI--QGRITLCGMISQ  122 (208)
Q Consensus        90 d~v~d~~g~-~---------~---------------~~~~~~~l~~--~G~~v~~g~~~~  122 (208)
                      |+++++.|. .         .               .+.+++.|..  +|+++.+++...
T Consensus        91 d~lv~nAg~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~  150 (256)
T 3gaf_A           91 TVLVNNAGGGGPKPFDMPMSDFEWAFKLNLFSLFRLSQLAAPHMQKAGGGAILNISSMAG  150 (256)
T ss_dssp             CEEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGG
T ss_pred             CEEEECCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcCHHH
Confidence            999999872 1         1               2334444433  689999987654

>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}

Probab=98.25  E-value=3.3e-06  Score=62.94  Aligned_cols=80  Identities=20%  Similarity=0.288  Sum_probs=56.3

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhc---CCC-e--eEecCCCccHHHHHHhHCC--CCc
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKF---GFD-E--AFNYKEEPDLDAALKRYFP--EGI   89 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~---g~~-~--v~~~~~~~~~~~~~~~~~~--~~~   89 (208)
                      .|.++||+||++++|.+.++.+...|++|+++++++++.+.+.+++   +.. .  ..|..+.+++.+.+.+...  +++
T Consensus        31 ~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g~i  110 (276)
T 3r1i_A           31 SGKRALITGASTGIGKKVALAYAEAGAQVAVAARHSDALQVVADEIAGVGGKALPIRCDVTQPDQVRGMLDQMTGELGGI  110 (276)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            5789999999999999999998889999999999988766554333   322 1  2344443233333333322  269


Q ss_pred             cEEEeCCC
Q 028523           90 NIYFENVG   97 (208)
Q Consensus        90 d~v~d~~g   97 (208)
                      |+++++.|
T Consensus       111 D~lvnnAg  118 (276)
T 3r1i_A          111 DIAVCNAG  118 (276)
T ss_dssp             SEEEECCC
T ss_pred             CEEEECCC
Confidence            99999887

>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=98.25  E-value=4.7e-06  Score=61.61  Aligned_cols=82  Identities=11%  Similarity=0.171  Sum_probs=57.6

Q ss_pred             CCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhc---CCCe---eEecCCCccHHHHHHhHC--CC
Q 028523           16 PKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKF---GFDE---AFNYKEEPDLDAALKRYF--PE   87 (208)
Q Consensus        16 ~~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~---g~~~---v~~~~~~~~~~~~~~~~~--~~   87 (208)
                      .-.|+++||+||++++|.+.++.+...|++|++++++.++.+.+.+++   |...   ..|..+.+++.+.+.+..  -+
T Consensus         8 ~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   87 (264)
T 3ucx_A            8 LLTDKVVVISGVGPALGTTLARRCAEQGADLVLAARTVERLEDVAKQVTDTGRRALSVGTDITDDAQVAHLVDETMKAYG   87 (264)
T ss_dssp             TTTTCEEEEESCCTTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTS
T ss_pred             CcCCcEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            346889999999999999999998889999999999988776654333   3322   235454323333333322  13


Q ss_pred             CccEEEeCCC
Q 028523           88 GINIYFENVG   97 (208)
Q Consensus        88 ~~d~v~d~~g   97 (208)
                      ++|+++++.|
T Consensus        88 ~id~lv~nAg   97 (264)
T 3ucx_A           88 RVDVVINNAF   97 (264)
T ss_dssp             CCSEEEECCC
T ss_pred             CCcEEEECCC
Confidence            6999999886

>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*

Probab=98.24  E-value=3.6e-06  Score=61.67  Aligned_cols=80  Identities=14%  Similarity=0.167  Sum_probs=56.3

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCe----eEecCCCccHHHHHHhHC-CCCccEE
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDE----AFNYKEEPDLDAALKRYF-PEGINIY   92 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~----v~~~~~~~~~~~~~~~~~-~~~~d~v   92 (208)
                      .+.+++|+||+|++|...++.+...|++|+++++++++.+.+.++++...    ..|..+.+.+.+.+.+.. -+++|++
T Consensus        10 ~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~id~l   89 (254)
T 2wsb_A           10 DGACAAVTGAGSGIGLEICRAFAASGARLILIDREAAALDRAAQELGAAVAARIVADVTDAEAMTAAAAEAEAVAPVSIL   89 (254)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGEEEEEECCTTCHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcccceeEEEEecCCHHHHHHHHHHHHhhCCCcEE
Confidence            57899999999999999999988899999999999887776654554322    234444312332222211 1369999


Q ss_pred             EeCCC
Q 028523           93 FENVG   97 (208)
Q Consensus        93 ~d~~g   97 (208)
                      |++.|
T Consensus        90 i~~Ag   94 (254)
T 2wsb_A           90 VNSAG   94 (254)
T ss_dssp             EECCC
T ss_pred             EECCc
Confidence            99987

>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2

Probab=98.24  E-value=5e-06  Score=61.40  Aligned_cols=80  Identities=15%  Similarity=0.256  Sum_probs=55.8

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhc---CCCe---eEecCCCccHHHHHHhHCC--CCc
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKF---GFDE---AFNYKEEPDLDAALKRYFP--EGI   89 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~---g~~~---v~~~~~~~~~~~~~~~~~~--~~~   89 (208)
                      .+.++||+||+|++|.+.++.+...|++|+++++++++.+.+.+++   |...   ..|..+.+++...+.+...  +++
T Consensus         6 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   85 (262)
T 1zem_A            6 NGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGVEARSYVCDVTSEEAVIGTVDSVVRDFGKI   85 (262)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCC
Confidence            5789999999999999999999999999999999988766554333   4322   2344443233333332221  269


Q ss_pred             cEEEeCCC
Q 028523           90 NIYFENVG   97 (208)
Q Consensus        90 d~v~d~~g   97 (208)
                      |++|++.|
T Consensus        86 d~lv~nAg   93 (262)
T 1zem_A           86 DFLFNNAG   93 (262)
T ss_dssp             CEEEECCC
T ss_pred             CEEEECCC
Confidence            99999886

>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}

Probab=98.24  E-value=1.1e-05  Score=60.92  Aligned_cols=94  Identities=19%  Similarity=0.230  Sum_probs=72.2

Q ss_pred             CCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHHHHhHCCCCccEEEeC
Q 028523           16 PKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFEN   95 (208)
Q Consensus        16 ~~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~d~v~d~   95 (208)
                      --.|.+++|+|+ |.+|..+++.++..|++|++.+++.++.+.+. ++|.. ++++.   ++.+.+    . ..|+|+.+
T Consensus       154 ~l~g~~v~IiG~-G~iG~~~a~~l~~~G~~V~~~d~~~~~~~~~~-~~g~~-~~~~~---~l~~~l----~-~aDvVi~~  222 (300)
T 2rir_A          154 TIHGSQVAVLGL-GRTGMTIARTFAALGANVKVGARSSAHLARIT-EMGLV-PFHTD---ELKEHV----K-DIDICINT  222 (300)
T ss_dssp             CSTTSEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH-HTTCE-EEEGG---GHHHHS----T-TCSEEEEC
T ss_pred             CCCCCEEEEEcc-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-HCCCe-EEchh---hHHHHh----h-CCCEEEEC
Confidence            347899999995 99999999999999999999999988877776 67763 33321   333322    2 48999999


Q ss_pred             CCchh-HHHHHHhhccCCEEEEEecc
Q 028523           96 VGGKM-LDAVLLNMRIQGRITLCGMI  120 (208)
Q Consensus        96 ~g~~~-~~~~~~~l~~~G~~v~~g~~  120 (208)
                      ++... -...+..|++++.++.++..
T Consensus       223 ~p~~~i~~~~~~~mk~g~~lin~a~g  248 (300)
T 2rir_A          223 IPSMILNQTVLSSMTPKTLILDLASR  248 (300)
T ss_dssp             CSSCCBCHHHHTTSCTTCEEEECSST
T ss_pred             CChhhhCHHHHHhCCCCCEEEEEeCC
Confidence            98533 34677889999999998764

>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*

Probab=98.23  E-value=4.5e-06  Score=62.20  Aligned_cols=80  Identities=18%  Similarity=0.286  Sum_probs=56.2

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhc----CCCe---eEecCCCccHHHHHHhHCC--CC
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKF----GFDE---AFNYKEEPDLDAALKRYFP--EG   88 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~----g~~~---v~~~~~~~~~~~~~~~~~~--~~   88 (208)
                      .|.++||+||++++|.+.++.+...|++|++++++.++.+.+.+++    |...   ..|..+..+..+.+.+...  ++
T Consensus        26 ~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~  105 (277)
T 4fc7_A           26 RDKVAFITGGGSGIGFRIAEIFMRHGCHTVIASRSLPRVLTAARKLAGATGRRCLPLSMDVRAPPAVMAAVDQALKEFGR  105 (277)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            5789999999999999999999889999999999987755443233    4322   2344443233333333322  36


Q ss_pred             ccEEEeCCC
Q 028523           89 INIYFENVG   97 (208)
Q Consensus        89 ~d~v~d~~g   97 (208)
                      +|+++++.|
T Consensus       106 id~lv~nAg  114 (277)
T 4fc7_A          106 IDILINCAA  114 (277)
T ss_dssp             CCEEEECCC
T ss_pred             CCEEEECCc
Confidence            999999987

>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0

Probab=98.23  E-value=5.5e-06  Score=61.69  Aligned_cols=81  Identities=14%  Similarity=0.150  Sum_probs=54.1

Q ss_pred             CCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeC-------------CHHHHHHHHH---hcCCCe---eEecCCCccH
Q 028523           17 KQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAG-------------SKDKVDLLKN---KFGFDE---AFNYKEEPDL   77 (208)
Q Consensus        17 ~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~-------------s~~~~~~~~~---~~g~~~---v~~~~~~~~~   77 (208)
                      -.|.++||+||++++|.+.++.+...|++|+++++             +.++.+.+.+   ..+...   ..|..+.+.+
T Consensus         9 l~~k~~lVTGas~GIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v   88 (277)
T 3tsc_A            9 LEGRVAFITGAARGQGRAHAVRMAAEGADIIAVDIAGKLPSCVPYDPASPDDLSETVRLVEAANRRIVAAVVDTRDFDRL   88 (277)
T ss_dssp             TTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHH
T ss_pred             cCCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHH
Confidence            35789999999999999999999899999999987             4555444332   233322   2344443233


Q ss_pred             HHHHHhHCC--CCccEEEeCCC
Q 028523           78 DAALKRYFP--EGINIYFENVG   97 (208)
Q Consensus        78 ~~~~~~~~~--~~~d~v~d~~g   97 (208)
                      .+.+.+...  +++|+++++.|
T Consensus        89 ~~~~~~~~~~~g~id~lvnnAg  110 (277)
T 3tsc_A           89 RKVVDDGVAALGRLDIIVANAG  110 (277)
T ss_dssp             HHHHHHHHHHHSCCCEEEECCC
T ss_pred             HHHHHHHHHHcCCCCEEEECCC
Confidence            333333222  36999999987

>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}

Probab=98.23  E-value=2.8e-06  Score=64.64  Aligned_cols=80  Identities=19%  Similarity=0.224  Sum_probs=56.6

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhc---CC--C-e--eEecCCCccHHHHHHhHC--CC
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKF---GF--D-E--AFNYKEEPDLDAALKRYF--PE   87 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~---g~--~-~--v~~~~~~~~~~~~~~~~~--~~   87 (208)
                      .+.++||+||+|++|...++.+...|++|+++++++++.+.+.+++   +.  . .  ..|..+...+.+.+....  -+
T Consensus         7 ~~k~vlVTGas~gIG~~la~~l~~~G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g   86 (319)
T 3ioy_A            7 AGRTAFVTGGANGVGIGLVRQLLNQGCKVAIADIRQDSIDKALATLEAEGSGPEVMGVQLDVASREGFKMAADEVEARFG   86 (319)
T ss_dssp             TTCEEEEETTTSTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEECCTTCHHHHHHHHHHHHHHTC
T ss_pred             CCCEEEEcCCchHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCeEEEEECCCCCHHHHHHHHHHHHHhCC
Confidence            5789999999999999999988889999999999998776654333   32  1 1  235444323333333322  13


Q ss_pred             CccEEEeCCC
Q 028523           88 GINIYFENVG   97 (208)
Q Consensus        88 ~~d~v~d~~g   97 (208)
                      ++|++|++.|
T Consensus        87 ~id~lv~nAg   96 (319)
T 3ioy_A           87 PVSILCNNAG   96 (319)
T ss_dssp             CEEEEEECCC
T ss_pred             CCCEEEECCC
Confidence            6999999988

>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*

Probab=98.22  E-value=6e-06  Score=55.99  Aligned_cols=93  Identities=17%  Similarity=0.185  Sum_probs=60.3

Q ss_pred             cCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHHHHhHCCCCccEEE
Q 028523           14 CSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYF   93 (208)
Q Consensus        14 ~~~~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~d~v~   93 (208)
                      ....++++|+|.|+ |.+|..+++.++..|.+|+++++++++.+.+++..|.. ++..... + .+.+.+....++|+||
T Consensus        14 ~~~~~~~~v~IiG~-G~iG~~la~~L~~~g~~V~vid~~~~~~~~~~~~~g~~-~~~~d~~-~-~~~l~~~~~~~ad~Vi   89 (155)
T 2g1u_A           14 SKKQKSKYIVIFGC-GRLGSLIANLASSSGHSVVVVDKNEYAFHRLNSEFSGF-TVVGDAA-E-FETLKECGMEKADMVF   89 (155)
T ss_dssp             ---CCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCGGGGGGSCTTCCSE-EEESCTT-S-HHHHHTTTGGGCSEEE
T ss_pred             hcccCCCcEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHhcCCCc-EEEecCC-C-HHHHHHcCcccCCEEE
Confidence            34567889999995 99999999999999999999999988776554234543 3322221 2 2233332112699999


Q ss_pred             eCCCch-hHHHHHHhhcc
Q 028523           94 ENVGGK-MLDAVLLNMRI  110 (208)
Q Consensus        94 d~~g~~-~~~~~~~~l~~  110 (208)
                      .+++.+ ........++.
T Consensus        90 ~~~~~~~~~~~~~~~~~~  107 (155)
T 2g1u_A           90 AFTNDDSTNFFISMNARY  107 (155)
T ss_dssp             ECSSCHHHHHHHHHHHHH
T ss_pred             EEeCCcHHHHHHHHHHHH
Confidence            999964 33344444444

>3uce_A Dehydrogenase; rossmann fold, oxidoreductase; HET: NDP; 1.80A {Vibrio vulnificus}

Probab=98.22  E-value=2.1e-06  Score=61.80  Aligned_cols=89  Identities=10%  Similarity=0.088  Sum_probs=61.8

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHHHHhHCCCCccEEEeCCC
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVG   97 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~d~v~d~~g   97 (208)
                      .++++||+||++++|.+.++.+...|++|++++++.+              .|..+.+.+.+.+.++  +++|+++++.|
T Consensus         5 ~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~--------------~D~~~~~~v~~~~~~~--g~id~lv~nAg   68 (223)
T 3uce_A            5 DKTVYVVLGGTSGIGAELAKQLESEHTIVHVASRQTG--------------LDISDEKSVYHYFETI--GAFDHLIVTAG   68 (223)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHCSTTEEEEEESGGGT--------------CCTTCHHHHHHHHHHH--CSEEEEEECCC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEecCCcc--------------cCCCCHHHHHHHHHHh--CCCCEEEECCC
Confidence            4678999999999999999988888999999987653              2333331333333333  45888888877


Q ss_pred             ch---------------------------hHHHHHHhhccCCEEEEEecccc
Q 028523           98 GK---------------------------MLDAVLLNMRIQGRITLCGMISQ  122 (208)
Q Consensus        98 ~~---------------------------~~~~~~~~l~~~G~~v~~g~~~~  122 (208)
                      ..                           ..+.+++.++++|+++.++....
T Consensus        69 ~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~~sS~~~  120 (223)
T 3uce_A           69 SYAPAGKVVDVEVTQAKYAFDTKFWGAVLAAKHGARYLKQGGSITLTSGMLS  120 (223)
T ss_dssp             CCCCCSCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGEEEEEEEEEECCGGG
T ss_pred             CCCCCCCcccCCHHHHHhhheeeeeeHHHHHHHHHhhccCCeEEEEecchhh
Confidence            21                           12334456667899999987654

>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A*

Probab=98.22  E-value=5.7e-06  Score=60.61  Aligned_cols=79  Identities=11%  Similarity=0.228  Sum_probs=54.8

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCH-HHHHH-HHHhcCCCe---eEecCCCccHHHHHHhHCC--CCcc
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSK-DKVDL-LKNKFGFDE---AFNYKEEPDLDAALKRYFP--EGIN   90 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~-~~~~~-~~~~~g~~~---v~~~~~~~~~~~~~~~~~~--~~~d   90 (208)
                      .+.++||+||+|++|...++.+...|++|+++++++ ++.+. ++ +.+...   ..|..+.+++.+.+.+...  +++|
T Consensus         6 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~-~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id   84 (249)
T 2ew8_A            6 KDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAPEAEAAIR-NLGRRVLTVKCDVSQPGDVEAFGKQVISTFGRCD   84 (249)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHH-HTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCchhHHHHHHH-hcCCcEEEEEeecCCHHHHHHHHHHHHHHcCCCC
Confidence            478899999999999999999888999999999887 65543 44 555432   2344443233333333221  3699


Q ss_pred             EEEeCCC
Q 028523           91 IYFENVG   97 (208)
Q Consensus        91 ~v~d~~g   97 (208)
                      ++|++.|
T Consensus        85 ~lv~nAg   91 (249)
T 2ew8_A           85 ILVNNAG   91 (249)
T ss_dssp             EEEECCC
T ss_pred             EEEECCC
Confidence            9999887

>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}

Probab=98.22  E-value=2.3e-06  Score=63.22  Aligned_cols=105  Identities=11%  Similarity=-0.047  Sum_probs=68.4

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCe-eEecCCCccHHHHHHhHC--CCCccEEEe
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDE-AFNYKEEPDLDAALKRYF--PEGINIYFE   94 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~-v~~~~~~~~~~~~~~~~~--~~~~d~v~d   94 (208)
                      .+.++||+||++++|.+.++.+...|++|+++++++++.....++.+... ..|..+..++.+.+.+..  -+++|++++
T Consensus        26 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lv~  105 (260)
T 3gem_A           26 SSAPILITGASQRVGLHCALRLLEHGHRVIISYRTEHASVTELRQAGAVALYGDFSCETGIMAFIDLLKTQTSSLRAVVH  105 (260)
T ss_dssp             -CCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESSCCHHHHHHHHHTCEEEECCTTSHHHHHHHHHHHHHHCSCCSEEEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHhcCCeEEECCCCCHHHHHHHHHHHHHhcCCCCEEEE
Confidence            46789999999999999999888899999999998776433222556432 235444323333333322  136999999


Q ss_pred             CCCch-------------------------hHHHHHHhhcc--CCEEEEEecccc
Q 028523           95 NVGGK-------------------------MLDAVLLNMRI--QGRITLCGMISQ  122 (208)
Q Consensus        95 ~~g~~-------------------------~~~~~~~~l~~--~G~~v~~g~~~~  122 (208)
                      +.|..                         ..+.+++.|..  .|+++.++....
T Consensus       106 nAg~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~  160 (260)
T 3gem_A          106 NASEWLAETPGEEADNFTRMFSVHMLAPYLINLHCEPLLTASEVADIVHISDDVT  160 (260)
T ss_dssp             CCCCCCCCCTTCHHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGG
T ss_pred             CCCccCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEEECChhh
Confidence            98721                         02233444443  489999987654

>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}

Probab=98.22  E-value=3.4e-06  Score=62.67  Aligned_cols=80  Identities=21%  Similarity=0.364  Sum_probs=56.5

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhc---CCCe---eEecCCCccHHHHHHhHC--CCCc
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKF---GFDE---AFNYKEEPDLDAALKRYF--PEGI   89 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~---g~~~---v~~~~~~~~~~~~~~~~~--~~~~   89 (208)
                      .|.++||+||++++|.+.++.+...|++|+++++++++.+.+.+++   |...   ..|..+.+++.+.+.+..  .+++
T Consensus        25 ~gk~~lVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i  104 (271)
T 4ibo_A           25 GGRTALVTGSSRGLGRAMAEGLAVAGARILINGTDPSRVAQTVQEFRNVGHDAEAVAFDVTSESEIIEAFARLDEQGIDV  104 (271)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHHHHHHTCCC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHCCCC
Confidence            5789999999999999999999899999999999988766554333   4322   234444323333333322  2369


Q ss_pred             cEEEeCCC
Q 028523           90 NIYFENVG   97 (208)
Q Consensus        90 d~v~d~~g   97 (208)
                      |+++++.|
T Consensus       105 D~lv~nAg  112 (271)
T 4ibo_A          105 DILVNNAG  112 (271)
T ss_dssp             CEEEECCC
T ss_pred             CEEEECCC
Confidence            99999987

>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A*

Probab=98.22  E-value=5.8e-06  Score=61.44  Aligned_cols=80  Identities=10%  Similarity=0.071  Sum_probs=54.8

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeC-CHHHHHHHHHhc----CCCe---eEecCCC----ccHHHHHHhHC
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAG-SKDKVDLLKNKF----GFDE---AFNYKEE----PDLDAALKRYF   85 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~-s~~~~~~~~~~~----g~~~---v~~~~~~----~~~~~~~~~~~   85 (208)
                      .+.++||+||+|++|...++.+...|++|+++++ ++++.+.+.+++    +...   ..|..+.    +.+.+.+.+..
T Consensus        10 ~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   89 (276)
T 1mxh_A           10 ECPAAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLSLSSSLLDCCEDIIDCSF   89 (276)
T ss_dssp             -CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSTTHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHHhcCCceEEEeccCCCccccHHHHHHHHHHHH
Confidence            4678999999999999999988889999999999 877665554333    4322   2344443    23333333221


Q ss_pred             C--CCccEEEeCCC
Q 028523           86 P--EGINIYFENVG   97 (208)
Q Consensus        86 ~--~~~d~v~d~~g   97 (208)
                      .  +++|++|++.|
T Consensus        90 ~~~g~id~lv~nAg  103 (276)
T 1mxh_A           90 RAFGRCDVLVNNAS  103 (276)
T ss_dssp             HHHSCCCEEEECCC
T ss_pred             HhcCCCCEEEECCC
Confidence            1  26999999987

>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus}

Probab=98.22  E-value=6e-06  Score=59.79  Aligned_cols=79  Identities=18%  Similarity=0.188  Sum_probs=55.9

Q ss_pred             CCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCe--eEecCCCccHHHHHHhHCC--CCccEEEe
Q 028523           19 GEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDE--AFNYKEEPDLDAALKRYFP--EGINIYFE   94 (208)
Q Consensus        19 g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~--v~~~~~~~~~~~~~~~~~~--~~~d~v~d   94 (208)
                      +.+++|+||+|++|...++.+...|++|+++++++++.+.+.++++...  ..|..+.+++.+.+.+...  +++|++|+
T Consensus         5 ~k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~li~   84 (234)
T 2ehd_A            5 KGAVLITGASRGIGEATARLLHAKGYRVGLMARDEKRLQALAAELEGALPLPGDVREEGDWARAVAAMEEAFGELSALVN   84 (234)
T ss_dssp             CCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHSTTCEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEE
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhhceEEEecCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence            5689999999999999999888899999999999888776654554222  2344443233333332211  26999999


Q ss_pred             CCC
Q 028523           95 NVG   97 (208)
Q Consensus        95 ~~g   97 (208)
                      +.|
T Consensus        85 ~Ag   87 (234)
T 2ehd_A           85 NAG   87 (234)
T ss_dssp             CCC
T ss_pred             CCC
Confidence            987

>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}

Probab=98.21  E-value=4.9e-06  Score=61.80  Aligned_cols=80  Identities=19%  Similarity=0.356  Sum_probs=56.3

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHh---cCCC-e--eEecCCCccHHHHHHhHCC--CCc
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNK---FGFD-E--AFNYKEEPDLDAALKRYFP--EGI   89 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~---~g~~-~--v~~~~~~~~~~~~~~~~~~--~~~   89 (208)
                      .+.++||+||++++|.+.++.+...|++|+++++++++.+.+.++   .+.. .  ..|..+...+.+.+.+...  +++
T Consensus        27 ~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i  106 (270)
T 3ftp_A           27 DKQVAIVTGASRGIGRAIALELARRGAMVIGTATTEAGAEGIGAAFKQAGLEGRGAVLNVNDATAVDALVESTLKEFGAL  106 (270)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEEeCCCHHHHHHHHHHHHHHcCCC
Confidence            578999999999999999998888999999999998876654433   2332 1  3455543233333333222  269


Q ss_pred             cEEEeCCC
Q 028523           90 NIYFENVG   97 (208)
Q Consensus        90 d~v~d~~g   97 (208)
                      |++|++.|
T Consensus       107 D~lvnnAg  114 (270)
T 3ftp_A          107 NVLVNNAG  114 (270)
T ss_dssp             CEEEECCC
T ss_pred             CEEEECCC
Confidence            99999987

>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8}

Probab=98.21  E-value=1.1e-05  Score=58.68  Aligned_cols=79  Identities=16%  Similarity=0.184  Sum_probs=52.5

Q ss_pred             CCEEEEecCCchHHHHHHHHHHHcCCEEEEE-eCCHHHHHHHHHh---cCCCe-e---EecCCCccHHHHHHhHCC--CC
Q 028523           19 GEYVFVSAASGAVGQLVGQFAKLVGCYVVGS-AGSKDKVDLLKNK---FGFDE-A---FNYKEEPDLDAALKRYFP--EG   88 (208)
Q Consensus        19 g~~vli~ga~g~vG~~a~qla~~~g~~v~~~-~~s~~~~~~~~~~---~g~~~-v---~~~~~~~~~~~~~~~~~~--~~   88 (208)
                      +++++|+||+|++|...++.+...|++|+++ .+++++.+.+.++   .+... .   .|..+.+.+.+.+.+...  ++
T Consensus         1 ~k~vlITGasggiG~~~a~~l~~~G~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   80 (245)
T 2ph3_A            1 MRKALITGASRGIGRAIALRLAEDGFALAIHYGQNREKAEEVAEEARRRGSPLVAVLGANLLEAEAATALVHQAAEVLGG   80 (245)
T ss_dssp             CCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESSCHHHHHHHHHHHHHTTCSCEEEEECCTTSHHHHHHHHHHHHHHHTC
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHHHHhcCC
Confidence            3579999999999999999888899999998 7887766554322   24321 2   244433223333332211  36


Q ss_pred             ccEEEeCCC
Q 028523           89 INIYFENVG   97 (208)
Q Consensus        89 ~d~v~d~~g   97 (208)
                      +|++|++.|
T Consensus        81 ~d~li~~Ag   89 (245)
T 2ph3_A           81 LDTLVNNAG   89 (245)
T ss_dssp             CCEEEECCC
T ss_pred             CCEEEECCC
Confidence            999999987

>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}

Probab=98.21  E-value=6.8e-06  Score=60.43  Aligned_cols=80  Identities=11%  Similarity=0.151  Sum_probs=54.9

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHh---cCCC-e--eEecCCCccHHHHHHhHCC--CCc
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNK---FGFD-E--AFNYKEEPDLDAALKRYFP--EGI   89 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~---~g~~-~--v~~~~~~~~~~~~~~~~~~--~~~   89 (208)
                      .+.++||+||+|++|...++.+...|++|+++++++++.+.+.++   .+.. .  ..|..+.+++.+.+.+...  +++
T Consensus        12 ~~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   91 (260)
T 3awd_A           12 DNRVAIVTGGAQNIGLACVTALAEAGARVIIADLDEAMATKAVEDLRMEGHDVSSVVMDVTNTESVQNAVRSVHEQEGRV   91 (260)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence            578999999999999999998888999999999998765544323   2432 1  2344443233333333211  269


Q ss_pred             cEEEeCCC
Q 028523           90 NIYFENVG   97 (208)
Q Consensus        90 d~v~d~~g   97 (208)
                      |++|++.|
T Consensus        92 d~vi~~Ag   99 (260)
T 3awd_A           92 DILVACAG   99 (260)
T ss_dssp             CEEEECCC
T ss_pred             CEEEECCC
Confidence            99999887

>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2

Probab=98.20  E-value=6.7e-06  Score=61.05  Aligned_cols=80  Identities=19%  Similarity=0.223  Sum_probs=55.7

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhc---CCCe---eEecCCCccHHHHHHhHC--CCCc
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKF---GFDE---AFNYKEEPDLDAALKRYF--PEGI   89 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~---g~~~---v~~~~~~~~~~~~~~~~~--~~~~   89 (208)
                      .+.++||+||+|++|...++.+...|++|+++++++++.+.+.+++   |...   ..|..+.+.+.+.+.+..  -+++
T Consensus        30 ~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~i  109 (272)
T 1yb1_A           30 TGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGAKVHTFVVDCSNREDIYSSAKKVKAEIGDV  109 (272)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTCCC
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEEcCHHHHHHHHHHHHhcCCeEEEEEeeCCCHHHHHHHHHHHHHHCCCC
Confidence            5789999999999999999999889999999999988766544333   4321   234444323333333321  1369


Q ss_pred             cEEEeCCC
Q 028523           90 NIYFENVG   97 (208)
Q Consensus        90 d~v~d~~g   97 (208)
                      |++|++.|
T Consensus       110 D~li~~Ag  117 (272)
T 1yb1_A          110 SILVNNAG  117 (272)
T ss_dssp             SEEEECCC
T ss_pred             cEEEECCC
Confidence            99999987

>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2

Probab=98.20  E-value=3.5e-05  Score=56.02  Aligned_cols=78  Identities=15%  Similarity=0.128  Sum_probs=54.4

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCee--EecCCCccHHHHHHhHCCCCccEEEeC
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEA--FNYKEEPDLDAALKRYFPEGINIYFEN   95 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~v--~~~~~~~~~~~~~~~~~~~~~d~v~d~   95 (208)
                      ++.++||+||+|++|...++.+...|++|+++++++++.+.+.+++....+  .|..+.+.+.+.+.  .-+++|++|++
T Consensus         6 ~~~~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~--~~~~id~vi~~   83 (244)
T 1cyd_A            6 SGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKECPGIEPVCVDLGDWDATEKALG--GIGPVDLLVNN   83 (244)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHSTTCEEEECCTTCHHHHHHHHT--TCCCCSEEEEC
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccCCCcEEecCCCHHHHHHHHH--HcCCCCEEEEC
Confidence            567899999999999999999988999999999998877666534422222  33333212222222  11268999999


Q ss_pred             CC
Q 028523           96 VG   97 (208)
Q Consensus        96 ~g   97 (208)
                      .|
T Consensus        84 Ag   85 (244)
T 1cyd_A           84 AA   85 (244)
T ss_dssp             CC
T ss_pred             Cc
Confidence            87

>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa}

Probab=98.20  E-value=4.2e-06  Score=62.37  Aligned_cols=80  Identities=18%  Similarity=0.225  Sum_probs=55.6

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCC--C-e--eEecCCCccHHHHHHhHC--CCCcc
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGF--D-E--AFNYKEEPDLDAALKRYF--PEGIN   90 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~--~-~--v~~~~~~~~~~~~~~~~~--~~~~d   90 (208)
                      .+.++||+||+|++|.+.++.+...|++|+++++++++.+.+.+++..  . .  ..|..+.+.+.+.+.+..  -+++|
T Consensus        28 ~~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD  107 (276)
T 2b4q_A           28 AGRIALVTGGSRGIGQMIAQGLLEAGARVFICARDAEACADTATRLSAYGDCQAIPADLSSEAGARRLAQALGELSARLD  107 (276)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHTTSSCEEECCCCTTSHHHHHHHHHHHHHHCSCCS
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCceEEEEeeCCCHHHHHHHHHHHHHhcCCCC
Confidence            578999999999999999999988999999999998876655434421  1 1  234444322333333221  13699


Q ss_pred             EEEeCCC
Q 028523           91 IYFENVG   97 (208)
Q Consensus        91 ~v~d~~g   97 (208)
                      ++|++.|
T Consensus       108 ~lvnnAg  114 (276)
T 2b4q_A          108 ILVNNAG  114 (276)
T ss_dssp             EEEECCC
T ss_pred             EEEECCC
Confidence            9999987

>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}

Probab=98.20  E-value=8.5e-06  Score=58.89  Aligned_cols=77  Identities=12%  Similarity=0.182  Sum_probs=55.0

Q ss_pred             CEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCe---eEecCCCccHHHHHHhHCCCCccEEEeCC
Q 028523           20 EYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDE---AFNYKEEPDLDAALKRYFPEGINIYFENV   96 (208)
Q Consensus        20 ~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~---v~~~~~~~~~~~~~~~~~~~~~d~v~d~~   96 (208)
                      +++||+||+|++|.+.++.+...|++|+++++++++.+.+.++++...   ..|..+...+.+.+.+ ....+|+++++.
T Consensus         2 k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~-~~~~~d~lv~~A   80 (230)
T 3guy_A            2 SLIVITGASSGLGAELAKLYDAEGKATYLTGRSESKLSTVTNCLSNNVGYRARDLASHQEVEQLFEQ-LDSIPSTVVHSA   80 (230)
T ss_dssp             -CEEEESTTSHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHTCSSCCCEEECCTTCHHHHHHHHHS-CSSCCSEEEECC
T ss_pred             CEEEEecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhhccCeEeecCCCHHHHHHHHHH-HhhcCCEEEEeC
Confidence            368999999999999999998999999999999998888775664422   2344443123222332 223459999988


Q ss_pred             C
Q 028523           97 G   97 (208)
Q Consensus        97 g   97 (208)
                      |
T Consensus        81 g   81 (230)
T 3guy_A           81 G   81 (230)
T ss_dssp             C
T ss_pred             C
Confidence            7

>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*

Probab=98.19  E-value=6.6e-06  Score=60.61  Aligned_cols=80  Identities=18%  Similarity=0.269  Sum_probs=54.9

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhc---CCCe---eEecCCCccHHHHHHhHCC--CCc
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKF---GFDE---AFNYKEEPDLDAALKRYFP--EGI   89 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~---g~~~---v~~~~~~~~~~~~~~~~~~--~~~   89 (208)
                      .+.++||+||+|++|...++.+...|++|+++++++++.+.+.+++   +...   ..|..+.+++...+.+...  +++
T Consensus        13 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   92 (260)
T 2zat_A           13 ENKVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQENVDRTVATLQGEGLSVTGTVCHVGKAEDRERLVAMAVNLHGGV   92 (260)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            5789999999999999999998889999999999987765443232   4322   2344433223333332211  369


Q ss_pred             cEEEeCCC
Q 028523           90 NIYFENVG   97 (208)
Q Consensus        90 d~v~d~~g   97 (208)
                      |++|++.|
T Consensus        93 D~lv~~Ag  100 (260)
T 2zat_A           93 DILVSNAA  100 (260)
T ss_dssp             CEEEECCC
T ss_pred             CEEEECCC
Confidence            99999887

>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum}

Probab=98.19  E-value=2.2e-06  Score=62.97  Aligned_cols=98  Identities=14%  Similarity=0.163  Sum_probs=66.7

Q ss_pred             CCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHHHHhHCC--CCccEEEeCC
Q 028523           19 GEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFP--EGINIYFENV   96 (208)
Q Consensus        19 g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~--~~~d~v~d~~   96 (208)
                      +.++||+||+|++|...++.+...|++|+++++++++.+.      ....++..+.++..+.+.+...  +++|++|++.
T Consensus        22 ~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~------~~~~~d~~d~~~v~~~~~~~~~~~g~iD~li~~A   95 (251)
T 3orf_A           22 SKNILVLGGSGALGAEVVKFFKSKSWNTISIDFRENPNAD------HSFTIKDSGEEEIKSVIEKINSKSIKVDTFVCAA   95 (251)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCTTSS------EEEECSCSSHHHHHHHHHHHHTTTCCEEEEEECC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCcccccc------cceEEEeCCHHHHHHHHHHHHHHcCCCCEEEECC
Confidence            6789999999999999999998999999999988754321      1112333333234444444432  3799999998


Q ss_pred             Cc--------h-------------------hHHHHHHhhccCCEEEEEecccc
Q 028523           97 GG--------K-------------------MLDAVLLNMRIQGRITLCGMISQ  122 (208)
Q Consensus        97 g~--------~-------------------~~~~~~~~l~~~G~~v~~g~~~~  122 (208)
                      |.        +                   ..+.+++.++++|+++.++....
T Consensus        96 g~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~  148 (251)
T 3orf_A           96 GGWSGGNASSDEFLKSVKGMIDMNLYSAFASAHIGAKLLNQGGLFVLTGASAA  148 (251)
T ss_dssp             CCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGG
T ss_pred             ccCCCCCcccccCHHHHHHHHHHHhHHHHHHHHHHHHhhccCCEEEEEechhh
Confidence            72        0                   02344556667899999987654

>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=98.19  E-value=3.8e-06  Score=62.67  Aligned_cols=80  Identities=15%  Similarity=0.286  Sum_probs=55.5

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhc---CC---C-e--eEecCCCccHHHHHHhHCC--
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKF---GF---D-E--AFNYKEEPDLDAALKRYFP--   86 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~---g~---~-~--v~~~~~~~~~~~~~~~~~~--   86 (208)
                      .+.++||+||+|++|...++.+...|++|+++++++++.+.+.+++   +.   . .  ..|..+.+++.+.+.+...  
T Consensus         5 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   84 (280)
T 1xkq_A            5 SNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINSTLKQF   84 (280)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHcCCCCcceEEEEecCCCHHHHHHHHHHHHHhc
Confidence            4688999999999999999988889999999999988766554333   32   1 1  2344443233333333221  


Q ss_pred             CCccEEEeCCC
Q 028523           87 EGINIYFENVG   97 (208)
Q Consensus        87 ~~~d~v~d~~g   97 (208)
                      +++|++|++.|
T Consensus        85 g~iD~lv~nAg   95 (280)
T 1xkq_A           85 GKIDVLVNNAG   95 (280)
T ss_dssp             SCCCEEEECCC
T ss_pred             CCCCEEEECCC
Confidence            26999999887

>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A*

Probab=98.19  E-value=4.2e-06  Score=61.69  Aligned_cols=80  Identities=13%  Similarity=0.232  Sum_probs=54.7

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHH-HHHHHHhc----CCCe---eEecCCCccHHHHHHhHCC--C
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDK-VDLLKNKF----GFDE---AFNYKEEPDLDAALKRYFP--E   87 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~-~~~~~~~~----g~~~---v~~~~~~~~~~~~~~~~~~--~   87 (208)
                      ++.++||+||+|++|...++.+...|++|+++++++++ .+.+.+++    |...   ..|..+.+++.+.+.+...  +
T Consensus         3 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g   82 (260)
T 1x1t_A            3 KGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGLVDNAVRQMG   82 (260)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHHHHHHHHHTSCEEEECCCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHhccCCcEEEEECCCCCHHHHHHHHHHHHHhcC
Confidence            46889999999999999999998899999999988776 55443233    4322   1344443223333333221  3


Q ss_pred             CccEEEeCCC
Q 028523           88 GINIYFENVG   97 (208)
Q Consensus        88 ~~d~v~d~~g   97 (208)
                      ++|++|++.|
T Consensus        83 ~iD~lv~~Ag   92 (260)
T 1x1t_A           83 RIDILVNNAG   92 (260)
T ss_dssp             CCSEEEECCC
T ss_pred             CCCEEEECCC
Confidence            6999999987

>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G

Probab=98.19  E-value=1.2e-05  Score=58.45  Aligned_cols=79  Identities=23%  Similarity=0.340  Sum_probs=52.6

Q ss_pred             CCEEEEecCCchHHHHHHHHHHHcCCEEEEE-eCCHHHHHHHHHh---cCCCe---eEecCCCccHHHHHHhHC--CCCc
Q 028523           19 GEYVFVSAASGAVGQLVGQFAKLVGCYVVGS-AGSKDKVDLLKNK---FGFDE---AFNYKEEPDLDAALKRYF--PEGI   89 (208)
Q Consensus        19 g~~vli~ga~g~vG~~a~qla~~~g~~v~~~-~~s~~~~~~~~~~---~g~~~---v~~~~~~~~~~~~~~~~~--~~~~   89 (208)
                      |.++||+||+|++|...++.+...|++|+++ .+++++.+.+.++   .+...   ..|..+.+++.+.+.+..  -+++
T Consensus         1 ~k~vlVTGasggiG~~la~~l~~~G~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   80 (244)
T 1edo_A            1 SPVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVSKEADVEAMMKTAIDAWGTI   80 (244)
T ss_dssp             CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHTCEEEEEECCTTSHHHHHHHHHHHHHHSSCC
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEeCCCCCHHHHHHHHHHHHHHcCCC
Confidence            4689999999999999999998899999985 7787765544322   24321   234444323333333221  1369


Q ss_pred             cEEEeCCC
Q 028523           90 NIYFENVG   97 (208)
Q Consensus        90 d~v~d~~g   97 (208)
                      |++|++.|
T Consensus        81 d~li~~Ag   88 (244)
T 1edo_A           81 DVVVNNAG   88 (244)
T ss_dssp             SEEEECCC
T ss_pred             CEEEECCC
Confidence            99999887

>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*

Probab=98.18  E-value=2.5e-05  Score=56.53  Aligned_cols=80  Identities=14%  Similarity=0.283  Sum_probs=54.3

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhc----CCCe-e--EecCCCccHHHHHHhHCC--CC
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKF----GFDE-A--FNYKEEPDLDAALKRYFP--EG   88 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~----g~~~-v--~~~~~~~~~~~~~~~~~~--~~   88 (208)
                      +++++||+||+|++|...++.+...|++|++++++.++.+.+.+++    +... .  .|..+.+++.+.+.+...  ++
T Consensus         1 ~~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~   80 (235)
T 3l77_A            1 EMKVAVITGASRGIGEAIARALARDGYALALGARSVDRLEKIAHELMQEQGVEVFYHHLDVSKAESVEEFSKKVLERFGD   80 (235)
T ss_dssp             CCCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHCC-HHHHHSS
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCeEEEEEeccCCHHHHHHHHHHHHHhcCC
Confidence            3678999999999999999999999999999999988766554332    3322 2  344433122222221111  26


Q ss_pred             ccEEEeCCC
Q 028523           89 INIYFENVG   97 (208)
Q Consensus        89 ~d~v~d~~g   97 (208)
                      +|++|++.|
T Consensus        81 id~li~~Ag   89 (235)
T 3l77_A           81 VDVVVANAG   89 (235)
T ss_dssp             CSEEEECCC
T ss_pred             CCEEEECCc
Confidence            999999987

>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2

Probab=98.18  E-value=5.9e-06  Score=60.80  Aligned_cols=78  Identities=13%  Similarity=0.157  Sum_probs=54.7

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCee--EecCCCccHHHHHHhHCC--CCccEEE
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEA--FNYKEEPDLDAALKRYFP--EGINIYF   93 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~v--~~~~~~~~~~~~~~~~~~--~~~d~v~   93 (208)
                      .+.++||+||+|++|...++.+...|++|+++++++++ +.+.++++. ..  .|..+.+++.+.+.+...  +++|++|
T Consensus         5 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~-~~~~~~~~~-~~~~~D~~~~~~~~~~~~~~~~~~g~iD~lv   82 (256)
T 2d1y_A            5 AGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEG-KEVAEAIGG-AFFQVDLEDERERVRFVEEAAYALGRVDVLV   82 (256)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTH-HHHHHHHTC-EEEECCTTCHHHHHHHHHHHHHHHSCCCEEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChhH-HHHHHHhhC-CEEEeeCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence            46889999999999999999888899999999998877 444435542 32  344443233333333211  3699999


Q ss_pred             eCCC
Q 028523           94 ENVG   97 (208)
Q Consensus        94 d~~g   97 (208)
                      ++.|
T Consensus        83 ~~Ag   86 (256)
T 2d1y_A           83 NNAA   86 (256)
T ss_dssp             ECCC
T ss_pred             ECCC
Confidence            9987

>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum}

Probab=98.18  E-value=1.1e-05  Score=58.79  Aligned_cols=80  Identities=19%  Similarity=0.288  Sum_probs=51.3

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEE-eCCHHHHHHHHH---hcCCCe---eEecCCCccHHHHHHhHCC--CC
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGS-AGSKDKVDLLKN---KFGFDE---AFNYKEEPDLDAALKRYFP--EG   88 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~-~~s~~~~~~~~~---~~g~~~---v~~~~~~~~~~~~~~~~~~--~~   88 (208)
                      ++.++||+||+|++|...++.+...|++|+++ .+++++.+.+.+   ..+...   ..|..+.+.+.+.+.+...  ++
T Consensus         4 ~~~~vlItGasggiG~~~a~~l~~~G~~V~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   83 (247)
T 2hq1_A            4 KGKTAIVTGSSRGLGKAIAWKLGNMGANIVLNGSPASTSLDATAEEFKAAGINVVVAKGDVKNPEDVENMVKTAMDAFGR   83 (247)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECTTCSHHHHHHHHHHHTTCCEEEEESCTTSHHHHHHHHHHHHHHHSC
T ss_pred             CCcEEEEECCCchHHHHHHHHHHHCCCEEEEEcCcCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHhcCC
Confidence            46789999999999999999988899999998 555554443322   234322   2344443223333332211  26


Q ss_pred             ccEEEeCCC
Q 028523           89 INIYFENVG   97 (208)
Q Consensus        89 ~d~v~d~~g   97 (208)
                      +|++|++.|
T Consensus        84 ~d~vi~~Ag   92 (247)
T 2hq1_A           84 IDILVNNAG   92 (247)
T ss_dssp             CCEEEECC-
T ss_pred             CCEEEECCC
Confidence            999999987

>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*

Probab=98.18  E-value=4.7e-06  Score=61.68  Aligned_cols=105  Identities=13%  Similarity=0.111  Sum_probs=70.1

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHh----cCCC-e---eEecCCCccHHHHHHhHCC--C
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNK----FGFD-E---AFNYKEEPDLDAALKRYFP--E   87 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~----~g~~-~---v~~~~~~~~~~~~~~~~~~--~   87 (208)
                      .+.++||+||++++|.+.++.+...|++|+++++++++.+.+.++    .+.. .   ..|..+.++..+.+.+...  +
T Consensus         7 ~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   86 (265)
T 3lf2_A            7 SEAVAVVTGGSSGIGLATVELLLEAGAAVAFCARDGERLRAAESALRQRFPGARLFASVCDVLDALQVRAFAEACERTLG   86 (265)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHHHHHC
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCCHHHHHHHHHHHHHHcC
Confidence            578999999999999999999988999999999998876655433    3322 1   2344443233333333221  3


Q ss_pred             CccEEEeCCCc-h-------------------------hHHHHHHhhcc--CCEEEEEecccc
Q 028523           88 GINIYFENVGG-K-------------------------MLDAVLLNMRI--QGRITLCGMISQ  122 (208)
Q Consensus        88 ~~d~v~d~~g~-~-------------------------~~~~~~~~l~~--~G~~v~~g~~~~  122 (208)
                      ++|+++++.|. .                         ..+.+++.|..  +|+++.+++...
T Consensus        87 ~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~  149 (265)
T 3lf2_A           87 CASILVNNAGQGRVSTFAETTDEAWSEELQLKFFSVIHPVRAFLPQLESRADAAIVCVNSLLA  149 (265)
T ss_dssp             SCSEEEECCCCCCCBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTEEEEEEEEGGG
T ss_pred             CCCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCeEEEEECCccc
Confidence            69999999872 1                         02334455543  689999887654

>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=98.18  E-value=5.8e-06  Score=61.53  Aligned_cols=80  Identities=13%  Similarity=0.272  Sum_probs=55.9

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhc---CC---C-e--eEecCCCccHHHHHHhHCC--
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKF---GF---D-E--AFNYKEEPDLDAALKRYFP--   86 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~---g~---~-~--v~~~~~~~~~~~~~~~~~~--   86 (208)
                      .+.++||+||+|++|...++.+...|++|+++++++++.+.+.+++   +.   . .  ..|..+.+++.+.+.+...  
T Consensus         5 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   84 (278)
T 1spx_A            5 AEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTTLGKF   84 (278)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcccCCCceeEEecccCCHHHHHHHHHHHHHHc
Confidence            4678999999999999999988889999999999988776655444   21   1 1  2344443233333332221  


Q ss_pred             CCccEEEeCCC
Q 028523           87 EGINIYFENVG   97 (208)
Q Consensus        87 ~~~d~v~d~~g   97 (208)
                      +++|++|++.|
T Consensus        85 g~id~lv~~Ag   95 (278)
T 1spx_A           85 GKLDILVNNAG   95 (278)
T ss_dssp             SCCCEEEECCC
T ss_pred             CCCCEEEECCC
Confidence            26999999987

>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens}

Probab=98.18  E-value=1.1e-05  Score=59.39  Aligned_cols=80  Identities=14%  Similarity=0.183  Sum_probs=56.1

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhc---CCCe---eEecCCCccHHHHHHhHC---CCC
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKF---GFDE---AFNYKEEPDLDAALKRYF---PEG   88 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~---g~~~---v~~~~~~~~~~~~~~~~~---~~~   88 (208)
                      .+.++||+||+|++|...++.+...|++|+++++++++.+.+.+++   |...   ..|..+.+++...+.+..   .++
T Consensus         4 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~g~   83 (260)
T 2qq5_A            4 NGQVCVVTGASRGIGRGIALQLCKAGATVYITGRHLDTLRVVAQEAQSLGGQCVPVVCDSSQESEVRSLFEQVDREQQGR   83 (260)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSSEEEEEECCTTSHHHHHHHHHHHHHHHTTC
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHcCCceEEEECCCCCHHHHHHHHHHHHHhcCCC
Confidence            4688999999999999999999889999999999988766554333   4321   234444323333333331   347


Q ss_pred             ccEEEeCCC
Q 028523           89 INIYFENVG   97 (208)
Q Consensus        89 ~d~v~d~~g   97 (208)
                      +|+++++.|
T Consensus        84 id~lvnnAg   92 (260)
T 2qq5_A           84 LDVLVNNAY   92 (260)
T ss_dssp             CCEEEECCC
T ss_pred             ceEEEECCc
Confidence            999999984

>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*

Probab=98.18  E-value=6.1e-06  Score=65.65  Aligned_cols=99  Identities=15%  Similarity=0.192  Sum_probs=72.5

Q ss_pred             HHHHHhcCC-CCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHHHHhHCC
Q 028523            8 AGFFEVCSP-KQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFP   86 (208)
Q Consensus         8 ~~l~~~~~~-~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~   86 (208)
                      .++.+.... -.|++++|+|+ |++|...++.++..|++|+++++++.+...+. ..|.+ +.+      ..+    . .
T Consensus       253 dgi~r~tg~~L~GKtVvVtGa-GgIG~aiA~~Laa~GA~Viv~D~~~~~a~~Aa-~~g~d-v~~------lee----~-~  318 (488)
T 3ond_A          253 DGLMRATDVMIAGKVAVVAGY-GDVGKGCAAALKQAGARVIVTEIDPICALQAT-MEGLQ-VLT------LED----V-V  318 (488)
T ss_dssp             HHHHHHHCCCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHH-HTTCE-ECC------GGG----T-T
T ss_pred             HHHHHHcCCcccCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHH-HhCCc-cCC------HHH----H-H
Confidence            344333333 47999999997 79999999999999999999999988877776 55642 211      111    1 1


Q ss_pred             CCccEEEeCCCc-hhH-HHHHHhhccCCEEEEEecc
Q 028523           87 EGINIYFENVGG-KML-DAVLLNMRIQGRITLCGMI  120 (208)
Q Consensus        87 ~~~d~v~d~~g~-~~~-~~~~~~l~~~G~~v~~g~~  120 (208)
                      ..+|+++++.|. +.+ ...+..|++++.++..|..
T Consensus       319 ~~aDvVi~atG~~~vl~~e~l~~mk~gaiVvNaG~~  354 (488)
T 3ond_A          319 SEADIFVTTTGNKDIIMLDHMKKMKNNAIVCNIGHF  354 (488)
T ss_dssp             TTCSEEEECSSCSCSBCHHHHTTSCTTEEEEESSST
T ss_pred             HhcCEEEeCCCChhhhhHHHHHhcCCCeEEEEcCCC
Confidence            158999999984 444 4588999999999888763

>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*

Probab=98.18  E-value=1.4e-05  Score=58.97  Aligned_cols=80  Identities=16%  Similarity=0.284  Sum_probs=55.6

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhc---CCCe---eEecCCCccHHHHHH---hHCCCC
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKF---GFDE---AFNYKEEPDLDAALK---RYFPEG   88 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~---g~~~---v~~~~~~~~~~~~~~---~~~~~~   88 (208)
                      .+.++||+||+|++|...++.+...|++|+++++++++.+.+.+++   |...   ..|..+.+++.+.+.   +...++
T Consensus         8 ~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~   87 (260)
T 2ae2_A            8 EGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSSRSERQELMNTVANHFHGK   87 (260)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHTTTC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            5789999999999999999988889999999999988765543333   4321   234444322333332   222246


Q ss_pred             ccEEEeCCC
Q 028523           89 INIYFENVG   97 (208)
Q Consensus        89 ~d~v~d~~g   97 (208)
                      +|+++++.|
T Consensus        88 id~lv~~Ag   96 (260)
T 2ae2_A           88 LNILVNNAG   96 (260)
T ss_dssp             CCEEEECCC
T ss_pred             CCEEEECCC
Confidence            999999987

>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=98.17  E-value=4.3e-06  Score=62.96  Aligned_cols=80  Identities=19%  Similarity=0.338  Sum_probs=55.4

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhc---CC---C-e--eEecCCCccHHHHHHhHCC--
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKF---GF---D-E--AFNYKEEPDLDAALKRYFP--   86 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~---g~---~-~--v~~~~~~~~~~~~~~~~~~--   86 (208)
                      .+.++||+||+|++|...++.+...|++|+++++++++.+.+.+++   |.   . .  ..|..+.+.+.+.+.+...  
T Consensus        25 ~~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~  104 (297)
T 1xhl_A           25 SGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTTLAKF  104 (297)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEEecCCCCHHHHHHHHHHHHHhc
Confidence            5789999999999999999998889999999999988766544333   32   1 1  2344443233333332211  


Q ss_pred             CCccEEEeCCC
Q 028523           87 EGINIYFENVG   97 (208)
Q Consensus        87 ~~~d~v~d~~g   97 (208)
                      +++|++|++.|
T Consensus       105 g~iD~lvnnAG  115 (297)
T 1xhl_A          105 GKIDILVNNAG  115 (297)
T ss_dssp             SCCCEEEECCC
T ss_pred             CCCCEEEECCC
Confidence            26999999887

>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}

Probab=98.17  E-value=2.6e-05  Score=55.85  Aligned_cols=92  Identities=12%  Similarity=-0.001  Sum_probs=64.0

Q ss_pred             EEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCe-eEecCCCccHHHHHHhHCCCCccEEEeCCCch
Q 028523           21 YVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDE-AFNYKEEPDLDAALKRYFPEGINIYFENVGGK   99 (208)
Q Consensus        21 ~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~-v~~~~~~~~~~~~~~~~~~~~~d~v~d~~g~~   99 (208)
                      +|||+||+|.+|...++.+...|.+|+++++++++.+.+. .-+... ..|..+. +. +.+     +++|+||++.|..
T Consensus         2 kilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~-~~~~~~~~~D~~d~-~~-~~~-----~~~d~vi~~ag~~   73 (224)
T 3h2s_A            2 KIAVLGATGRAGSAIVAEARRRGHEVLAVVRDPQKAADRL-GATVATLVKEPLVL-TE-ADL-----DSVDAVVDALSVP   73 (224)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHT-CTTSEEEECCGGGC-CH-HHH-----TTCSEEEECCCCC
T ss_pred             EEEEEcCCCHHHHHHHHHHHHCCCEEEEEEeccccccccc-CCCceEEecccccc-cH-hhc-----ccCCEEEECCccC
Confidence            5899999999999999999888999999999988876554 333322 2344443 32 211     2599999999741


Q ss_pred             -----------hHHHHHHhhcc-CCEEEEEecc
Q 028523          100 -----------MLDAVLLNMRI-QGRITLCGMI  120 (208)
Q Consensus       100 -----------~~~~~~~~l~~-~G~~v~~g~~  120 (208)
                                 .....++.++. +++++.+++.
T Consensus        74 ~~~~~~~~n~~~~~~l~~a~~~~~~~~v~~SS~  106 (224)
T 3h2s_A           74 WGSGRGYLHLDFATHLVSLLRNSDTLAVFILGS  106 (224)
T ss_dssp             TTSSCTHHHHHHHHHHHHTCTTCCCEEEEECCG
T ss_pred             CCcchhhHHHHHHHHHHHHHHHcCCcEEEEecc
Confidence                       13344555544 5789988754

>1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP}

Probab=98.16  E-value=9.8e-06  Score=59.17  Aligned_cols=77  Identities=18%  Similarity=0.049  Sum_probs=54.5

Q ss_pred             CCEEEEecCCchHHHHHHHHHHHcCCEEEEE-e--CCHHHHHHHHHhc-CCCeeEecCCCccHHHHHHhHCCCCccEEEe
Q 028523           19 GEYVFVSAASGAVGQLVGQFAKLVGCYVVGS-A--GSKDKVDLLKNKF-GFDEAFNYKEEPDLDAALKRYFPEGINIYFE   94 (208)
Q Consensus        19 g~~vli~ga~g~vG~~a~qla~~~g~~v~~~-~--~s~~~~~~~~~~~-g~~~v~~~~~~~~~~~~~~~~~~~~~d~v~d   94 (208)
                      +.++||+||+|++|.+.++.+...|++|+++ .  +++++.+.+.+++ +. .+.+..+-..+.+.+.+.. +++|++|+
T Consensus         1 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~r~~~~~~~~~~~~~~~-~~~~~~~v~~~~~~~~~~~-g~iD~lv~   78 (244)
T 1zmo_A            1 MVIALVTHARHFAGPAAVEALTQDGYTVVCHDASFADAAERQRFESENPGT-IALAEQKPERLVDATLQHG-EAIDTIVS   78 (244)
T ss_dssp             -CEEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHHHHHHSTTE-EECCCCCGGGHHHHHGGGS-SCEEEEEE
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCcCCHHHHHHHHHHhCCC-cccCHHHHHHHHHHHHHHc-CCCCEEEE
Confidence            4689999999999999999998899999999 5  8888877766465 32 2333332213333333332 36999999


Q ss_pred             CCC
Q 028523           95 NVG   97 (208)
Q Consensus        95 ~~g   97 (208)
                      +.|
T Consensus        79 ~Ag   81 (244)
T 1zmo_A           79 NDY   81 (244)
T ss_dssp             CCC
T ss_pred             CCC
Confidence            987

>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A*

Probab=98.16  E-value=1.1e-05  Score=59.34  Aligned_cols=76  Identities=12%  Similarity=-0.033  Sum_probs=52.1

Q ss_pred             CEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH--hcCCCeeEecCCCccHHHHHHhHCC--CCccEEEeC
Q 028523           20 EYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKN--KFGFDEAFNYKEEPDLDAALKRYFP--EGINIYFEN   95 (208)
Q Consensus        20 ~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~--~~g~~~v~~~~~~~~~~~~~~~~~~--~~~d~v~d~   95 (208)
                      +++||+||+|++|...++.+...|++|+++++++++.+.+.+  ..|..... .+.. ++.+.+.+...  +++|+++++
T Consensus         2 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~-~d~~-~v~~~~~~~~~~~g~iD~lv~n   79 (254)
T 1zmt_A            2 STAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELEAFAETYPQLKP-MSEQ-EPAELIEAVTSAYGQVDVLVSN   79 (254)
T ss_dssp             CEEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHHHHHHCTTSEE-CCCC-SHHHHHHHHHHHHSCCCEEEEE
T ss_pred             eEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCCcEEE-ECHH-HHHHHHHHHHHHhCCCCEEEEC
Confidence            368999999999999999998999999999988776655431  22433211 1222 44444433322  369999998


Q ss_pred             CC
Q 028523           96 VG   97 (208)
Q Consensus        96 ~g   97 (208)
                      .|
T Consensus        80 Ag   81 (254)
T 1zmt_A           80 DI   81 (254)
T ss_dssp             CC
T ss_pred             CC
Confidence            87

>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*

Probab=98.15  E-value=8.6e-06  Score=59.40  Aligned_cols=80  Identities=20%  Similarity=0.447  Sum_probs=55.4

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHh----cCCCe---eEecCCCccHHHHHHhHC--CCC
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNK----FGFDE---AFNYKEEPDLDAALKRYF--PEG   88 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~----~g~~~---v~~~~~~~~~~~~~~~~~--~~~   88 (208)
                      ++.+++|+||+|++|...++.+...|++|+++++++++.+.+.++    .+...   ..|..+.+.+.+.+.+..  -++
T Consensus         6 ~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   85 (248)
T 2pnf_A            6 QGKVSLVTGSTRGIGRAIAEKLASAGSTVIITGTSGERAKAVAEEIANKYGVKAHGVEMNLLSEESINKAFEEIYNLVDG   85 (248)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHHSSC
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhcCCceEEEEccCCCHHHHHHHHHHHHHhcCC
Confidence            468899999999999999998888999999999998876654422    34322   234444323333333221  136


Q ss_pred             ccEEEeCCC
Q 028523           89 INIYFENVG   97 (208)
Q Consensus        89 ~d~v~d~~g   97 (208)
                      +|++|++.|
T Consensus        86 ~d~vi~~Ag   94 (248)
T 2pnf_A           86 IDILVNNAG   94 (248)
T ss_dssp             CSEEEECCC
T ss_pred             CCEEEECCC
Confidence            999999887

>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus}

Probab=98.15  E-value=7.7e-06  Score=59.77  Aligned_cols=79  Identities=18%  Similarity=0.175  Sum_probs=54.6

Q ss_pred             CCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhc----CCC-e--eEecCCCccHHHHHHhHCC--CCc
Q 028523           19 GEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKF----GFD-E--AFNYKEEPDLDAALKRYFP--EGI   89 (208)
Q Consensus        19 g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~----g~~-~--v~~~~~~~~~~~~~~~~~~--~~~   89 (208)
                      +.+++|+||+|++|...++.+...|++|+++++++++.+.+.+++    +.. .  ..|..+.+.+.+.+.+...  +++
T Consensus         2 ~k~vlItGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   81 (250)
T 2cfc_A            2 SRVAIVTGASSGNGLAIATRFLARGDRVAALDLSAETLEETARTHWHAYADKVLRVRADVADEGDVNAAIAATMEQFGAI   81 (250)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHSTTTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCC
Confidence            578999999999999999988889999999999988776654344    222 1  2344443233333332221  269


Q ss_pred             cEEEeCCC
Q 028523           90 NIYFENVG   97 (208)
Q Consensus        90 d~v~d~~g   97 (208)
                      |++|++.|
T Consensus        82 d~li~~Ag   89 (250)
T 2cfc_A           82 DVLVNNAG   89 (250)
T ss_dssp             CEEEECCC
T ss_pred             CEEEECCC
Confidence            99999886

>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A

Probab=98.15  E-value=1.1e-05  Score=59.38  Aligned_cols=79  Identities=15%  Similarity=0.286  Sum_probs=52.1

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHH--HHHHHHhcCCCe---eEecCCCccHHHHHHhHCC--CCcc
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDK--VDLLKNKFGFDE---AFNYKEEPDLDAALKRYFP--EGIN   90 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~--~~~~~~~~g~~~---v~~~~~~~~~~~~~~~~~~--~~~d   90 (208)
                      .+.++||+||+|++|...++.+...|++|+++++++++  .+.+. ..|...   ..|..+.+++.+.+.+...  +++|
T Consensus         3 ~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~l~-~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id   81 (255)
T 2q2v_A            3 KGKTALVTGSTSGIGLGIAQVLARAGANIVLNGFGDPAPALAEIA-RHGVKAVHHPADLSDVAQIEALFALAEREFGGVD   81 (255)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEECSSCCHHHHHHHH-TTSCCEEEECCCTTSHHHHHHHHHHHHHHHSSCS
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHH-hcCCceEEEeCCCCCHHHHHHHHHHHHHHcCCCC
Confidence            46789999999999999999888899999999987651  12222 234322   2344443233333332221  2699


Q ss_pred             EEEeCCC
Q 028523           91 IYFENVG   97 (208)
Q Consensus        91 ~v~d~~g   97 (208)
                      ++|++.|
T Consensus        82 ~lv~~Ag   88 (255)
T 2q2v_A           82 ILVNNAG   88 (255)
T ss_dssp             EEEECCC
T ss_pred             EEEECCC
Confidence            9999987

>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*

Probab=98.15  E-value=9.3e-06  Score=61.10  Aligned_cols=80  Identities=14%  Similarity=0.238  Sum_probs=55.6

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhc----CCCe---eEecCCCccHHHHHHhHC--CCC
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKF----GFDE---AFNYKEEPDLDAALKRYF--PEG   88 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~----g~~~---v~~~~~~~~~~~~~~~~~--~~~   88 (208)
                      .+.++||+||+|++|...++.+...|++|+++++++++.+.+.+++    +...   ..|..+.+.+.+.+.+..  -++
T Consensus        25 ~~k~vlITGasggiG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~  104 (302)
T 1w6u_A           25 QGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRDPDMVQNTVSELIKVAGH  104 (302)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHTCS
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCHHHHHHHHHHHHHHcCC
Confidence            5689999999999999999988889999999999988766544333    4322   234444323333333321  136


Q ss_pred             ccEEEeCCC
Q 028523           89 INIYFENVG   97 (208)
Q Consensus        89 ~d~v~d~~g   97 (208)
                      +|++|++.|
T Consensus       105 id~li~~Ag  113 (302)
T 1w6u_A          105 PNIVINNAA  113 (302)
T ss_dssp             CSEEEECCC
T ss_pred             CCEEEECCC
Confidence            899999987

>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A*

Probab=98.14  E-value=1.1e-05  Score=59.89  Aligned_cols=80  Identities=19%  Similarity=0.312  Sum_probs=55.6

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCC---e--eEecCCCccHHHHHHhHCC--CCcc
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFD---E--AFNYKEEPDLDAALKRYFP--EGIN   90 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~---~--v~~~~~~~~~~~~~~~~~~--~~~d   90 (208)
                      .+.++||+||+|++|...++.+...|++|++++++.++.+.+.++++..   .  ..|..+..++.+.+.+...  +++|
T Consensus        15 ~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   94 (278)
T 2bgk_A           15 QDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGSPDVISFVHCDVTKDEDVRNLVDTTIAKHGKLD   94 (278)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred             cCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCChhHHHHHHHHhCCCCceEEEECCCCCHHHHHHHHHHHHHHcCCCC
Confidence            5789999999999999999988889999999999887766554455431   1  2344443233333332211  3699


Q ss_pred             EEEeCCC
Q 028523           91 IYFENVG   97 (208)
Q Consensus        91 ~v~d~~g   97 (208)
                      ++|++.|
T Consensus        95 ~li~~Ag  101 (278)
T 2bgk_A           95 IMFGNVG  101 (278)
T ss_dssp             EEEECCC
T ss_pred             EEEECCc
Confidence            9999887

>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis}

Probab=98.14  E-value=1.3e-05  Score=59.62  Aligned_cols=80  Identities=18%  Similarity=0.285  Sum_probs=53.4

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH---hcCCCe---eEecCCCccHHHHHHhHCC--CCc
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKN---KFGFDE---AFNYKEEPDLDAALKRYFP--EGI   89 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~---~~g~~~---v~~~~~~~~~~~~~~~~~~--~~~   89 (208)
                      .+.++||+||+|++|...++.+...|++|+++++++++.+.+.+   ..+...   ..|..+.+.+.+.+.+...  +++
T Consensus        33 ~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~i  112 (279)
T 3ctm_A           33 KGKVASVTGSSGGIGWAVAEAYAQAGADVAIWYNSHPADEKAEHLQKTYGVHSKAYKCNISDPKSVEETISQQEKDFGTI  112 (279)
T ss_dssp             TTCEEEETTTTSSHHHHHHHHHHHHTCEEEEEESSSCCHHHHHHHHHHHCSCEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcceEEEeecCCHHHHHHHHHHHHHHhCCC
Confidence            46899999999999999998888889999999988765444332   234321   2344443233333333211  269


Q ss_pred             cEEEeCCC
Q 028523           90 NIYFENVG   97 (208)
Q Consensus        90 d~v~d~~g   97 (208)
                      |++|++.|
T Consensus       113 d~li~~Ag  120 (279)
T 3ctm_A          113 DVFVANAG  120 (279)
T ss_dssp             SEEEECGG
T ss_pred             CEEEECCc
Confidence            99999876

>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0

Probab=98.13  E-value=1.1e-05  Score=58.83  Aligned_cols=81  Identities=14%  Similarity=0.169  Sum_probs=55.1

Q ss_pred             CCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhc---CC--Cee--Eec--CCCccHHHHHHhHCC-
Q 028523           17 KQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKF---GF--DEA--FNY--KEEPDLDAALKRYFP-   86 (208)
Q Consensus        17 ~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~---g~--~~v--~~~--~~~~~~~~~~~~~~~-   86 (208)
                      -+|.+++|+||++++|...++.+...|++|+++++++++.+.+.+++   +.  ..+  ++.  .+..++.+.+.+... 
T Consensus        12 l~~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~d~d~~~~~~~~~~~~~~~~~   91 (247)
T 3i1j_A           12 LKGRVILVTGAARGIGAAAARAYAAHGASVVLLGRTEASLAEVSDQIKSAGQPQPLIIALNLENATAQQYRELAARVEHE   91 (247)
T ss_dssp             TTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTSCCCEEEECCTTTCCHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEecCHHHHHHHHHHHHhcCCCCceEEEeccccCCHHHHHHHHHHHHHh
Confidence            35789999999999999999999899999999999988776654332   32  122  232  222122332332221 


Q ss_pred             -CCccEEEeCCC
Q 028523           87 -EGINIYFENVG   97 (208)
Q Consensus        87 -~~~d~v~d~~g   97 (208)
                       +++|++|++.|
T Consensus        92 ~g~id~lv~nAg  103 (247)
T 3i1j_A           92 FGRLDGLLHNAS  103 (247)
T ss_dssp             HSCCSEEEECCC
T ss_pred             CCCCCEEEECCc
Confidence             26999999887

>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum}

Probab=98.13  E-value=9.1e-06  Score=59.84  Aligned_cols=79  Identities=10%  Similarity=0.208  Sum_probs=53.3

Q ss_pred             CCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHH--HHHHHHhc---CCCe---eEecCCCccHHHHHHhHCC--CC
Q 028523           19 GEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDK--VDLLKNKF---GFDE---AFNYKEEPDLDAALKRYFP--EG   88 (208)
Q Consensus        19 g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~--~~~~~~~~---g~~~---v~~~~~~~~~~~~~~~~~~--~~   88 (208)
                      +.++||+||+|++|...++.+...|++|+++++++++  .+.+.+++   +...   ..|..+.+++.+.+.+...  ++
T Consensus         2 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   81 (258)
T 3a28_C            2 SKVAMVTGGAQGIGRGISEKLAADGFDIAVADLPQQEEQAAETIKLIEAADQKAVFVGLDVTDKANFDSAIDEAAEKLGG   81 (258)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEECGGGHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHTC
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence            5789999999999999998888889999999988776  44443233   3321   2344443233333333221  26


Q ss_pred             ccEEEeCCC
Q 028523           89 INIYFENVG   97 (208)
Q Consensus        89 ~d~v~d~~g   97 (208)
                      +|++|++.|
T Consensus        82 iD~lv~nAg   90 (258)
T 3a28_C           82 FDVLVNNAG   90 (258)
T ss_dssp             CCEEEECCC
T ss_pred             CCEEEECCC
Confidence            999999887

>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*

Probab=98.13  E-value=8.9e-06  Score=59.59  Aligned_cols=80  Identities=19%  Similarity=0.284  Sum_probs=54.6

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHh---cCCCe---eEecCCCccHHHHHHhHCC--CCc
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNK---FGFDE---AFNYKEEPDLDAALKRYFP--EGI   89 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~---~g~~~---v~~~~~~~~~~~~~~~~~~--~~~   89 (208)
                      .+.++||+||+|++|...++.+...|++|+++++++++.+.+.++   .+...   ..|..+.+.+.+.+.+...  +++
T Consensus        10 ~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   89 (255)
T 1fmc_A           10 DGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFAISKLGKV   89 (255)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSSC
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHhcCCC
Confidence            578999999999999999998888899999999998776544323   24322   2344443223333332211  269


Q ss_pred             cEEEeCCC
Q 028523           90 NIYFENVG   97 (208)
Q Consensus        90 d~v~d~~g   97 (208)
                      |++|++.|
T Consensus        90 d~vi~~Ag   97 (255)
T 1fmc_A           90 DILVNNAG   97 (255)
T ss_dssp             CEEEECCC
T ss_pred             CEEEECCC
Confidence            99999887

>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*

Probab=98.13  E-value=1.7e-05  Score=58.56  Aligned_cols=80  Identities=13%  Similarity=0.223  Sum_probs=54.7

Q ss_pred             CCCEEEEecCC--chHHHHHHHHHHHcCCEEEEEeCCH---HHHHHHHHhcCCCe--eEecCCCccHHHHHHhHCC--CC
Q 028523           18 QGEYVFVSAAS--GAVGQLVGQFAKLVGCYVVGSAGSK---DKVDLLKNKFGFDE--AFNYKEEPDLDAALKRYFP--EG   88 (208)
Q Consensus        18 ~g~~vli~ga~--g~vG~~a~qla~~~g~~v~~~~~s~---~~~~~~~~~~g~~~--v~~~~~~~~~~~~~~~~~~--~~   88 (208)
                      .+.++||+||+  |++|...++.+...|++|+++++++   +..+.+.+..+...  ..|..+.+.+.+.+.+...  ++
T Consensus         8 ~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~   87 (265)
T 1qsg_A            8 SGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQLGSDIVLQCDVAEDASIDTMFAELGKVWPK   87 (265)
T ss_dssp             TTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHTTCSS
T ss_pred             CCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEcCcHHHHHHHHHHHHhcCCcEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            57889999998  9999999998888999999999886   33344432334322  2355543234444444332  26


Q ss_pred             ccEEEeCCC
Q 028523           89 INIYFENVG   97 (208)
Q Consensus        89 ~d~v~d~~g   97 (208)
                      +|++|++.|
T Consensus        88 iD~lv~~Ag   96 (265)
T 1qsg_A           88 FDGFVHSIG   96 (265)
T ss_dssp             EEEEEECCC
T ss_pred             CCEEEECCC
Confidence            999999887

>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus}

Probab=98.12  E-value=2.9e-06  Score=62.91  Aligned_cols=104  Identities=18%  Similarity=0.173  Sum_probs=67.8

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCC-eeEecCCCccHHHHHHhHCC--CCccEEEe
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFD-EAFNYKEEPDLDAALKRYFP--EGINIYFE   94 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~-~v~~~~~~~~~~~~~~~~~~--~~~d~v~d   94 (208)
                      .++++||+||+|++|.+.++.+...|++|++++++.++.+.+. .-... ...|..+..++.+.+.+...  +++|++|+
T Consensus        15 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~-~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lvn   93 (266)
T 3p19_A           15 MKKLVVITGASSGIGEAIARRFSEEGHPLLLLARRVERLKALN-LPNTLCAQVDVTDKYTFDTAITRAEKIYGPADAIVN   93 (266)
T ss_dssp             CCCEEEEESTTSHHHHHHHHHHHHTTCCEEEEESCHHHHHTTC-CTTEEEEECCTTCHHHHHHHHHHHHHHHCSEEEEEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHhh-cCCceEEEecCCCHHHHHHHHHHHHHHCCCCCEEEE
Confidence            4689999999999999999999899999999999887665432 11111 12344443233333333221  26999999


Q ss_pred             CCCch-----------h---------------HHHHHHhhc--cCCEEEEEecccc
Q 028523           95 NVGGK-----------M---------------LDAVLLNMR--IQGRITLCGMISQ  122 (208)
Q Consensus        95 ~~g~~-----------~---------------~~~~~~~l~--~~G~~v~~g~~~~  122 (208)
                      +.|..           .               ...+++.|.  ..|+++.+++...
T Consensus        94 nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~IV~isS~~~  149 (266)
T 3p19_A           94 NAGMMLLGQIDTQEANEWQRMFDVNVLGLLNGMQAVLAPMKARNCGTIINISSIAG  149 (266)
T ss_dssp             CCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGG
T ss_pred             CCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcChhh
Confidence            98731           1               122444443  3699999987654

>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}

Probab=98.12  E-value=1.3e-05  Score=59.41  Aligned_cols=103  Identities=14%  Similarity=0.233  Sum_probs=67.6

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhc-----CCCe---eEecCCCccHHHHHHhHCCCCc
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKF-----GFDE---AFNYKEEPDLDAALKRYFPEGI   89 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~-----g~~~---v~~~~~~~~~~~~~~~~~~~~~   89 (208)
                      .|.++||+||++++|.+.++.+...|++|+++++++++.+.+.+++     +...   ..|..+...+.+.+.+ . +++
T Consensus         9 ~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~-~-g~i   86 (267)
T 3t4x_A            9 KGKTALVTGSTAGIGKAIATSLVAEGANVLINGRREENVNETIKEIRAQYPDAILQPVVADLGTEQGCQDVIEK-Y-PKV   86 (267)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHCTTCEEEEEECCTTSHHHHHHHHHH-C-CCC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEecCCCCHHHHHHHHHh-c-CCC
Confidence            5789999999999999999988889999999999988765544332     1211   2233333122222222 2 369


Q ss_pred             cEEEeCCCc-h----------h---------------HHHHHHhhc--cCCEEEEEecccc
Q 028523           90 NIYFENVGG-K----------M---------------LDAVLLNMR--IQGRITLCGMISQ  122 (208)
Q Consensus        90 d~v~d~~g~-~----------~---------------~~~~~~~l~--~~G~~v~~g~~~~  122 (208)
                      |+++++.|. .          .               .+.+++.|.  .+|+++.+++...
T Consensus        87 d~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~  147 (267)
T 3t4x_A           87 DILINNLGIFEPVEYFDIPDEDWFKLFEVNIMSGVRLTRSYLKKMIERKEGRVIFIASEAA  147 (267)
T ss_dssp             SEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTEEEEEEECCGGG
T ss_pred             CEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEEcchhh
Confidence            999999872 1          1               233344453  3589999987654

>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}

Probab=98.12  E-value=8.9e-05  Score=51.54  Aligned_cols=93  Identities=11%  Similarity=0.063  Sum_probs=64.9

Q ss_pred             CCEEEEecCCchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHhcCCCeeE-ecCCCccHHHHHHhH-CCCCccEEEeC
Q 028523           19 GEYVFVSAASGAVGQLVGQFAKLV-GCYVVGSAGSKDKVDLLKNKFGFDEAF-NYKEEPDLDAALKRY-FPEGINIYFEN   95 (208)
Q Consensus        19 g~~vli~ga~g~vG~~a~qla~~~-g~~v~~~~~s~~~~~~~~~~~g~~~v~-~~~~~~~~~~~~~~~-~~~~~d~v~d~   95 (208)
                      +++|+|.|+ |.+|..+++.++.. |.+|+++++++++.+.++ +.|...+. |..+    .+.+.+. .-.++|+++.+
T Consensus        39 ~~~v~IiG~-G~~G~~~a~~L~~~~g~~V~vid~~~~~~~~~~-~~g~~~~~gd~~~----~~~l~~~~~~~~ad~vi~~  112 (183)
T 3c85_A           39 HAQVLILGM-GRIGTGAYDELRARYGKISLGIEIREEAAQQHR-SEGRNVISGDATD----PDFWERILDTGHVKLVLLA  112 (183)
T ss_dssp             TCSEEEECC-SHHHHHHHHHHHHHHCSCEEEEESCHHHHHHHH-HTTCCEEECCTTC----HHHHHTBCSCCCCCEEEEC
T ss_pred             CCcEEEECC-CHHHHHHHHHHHhccCCeEEEEECCHHHHHHHH-HCCCCEEEcCCCC----HHHHHhccCCCCCCEEEEe
Confidence            668999995 99999999999998 999999999999998888 77875443 3222    1233333 12379999999


Q ss_pred             CCch-hHHH---HHHhhccCCEEEEE
Q 028523           96 VGGK-MLDA---VLLNMRIQGRITLC  117 (208)
Q Consensus        96 ~g~~-~~~~---~~~~l~~~G~~v~~  117 (208)
                      ++.+ ....   ..+.+.+..+++..
T Consensus       113 ~~~~~~~~~~~~~~~~~~~~~~ii~~  138 (183)
T 3c85_A          113 MPHHQGNQTALEQLQRRNYKGQIAAI  138 (183)
T ss_dssp             CSSHHHHHHHHHHHHHTTCCSEEEEE
T ss_pred             CCChHHHHHHHHHHHHHCCCCEEEEE
Confidence            9854 2223   33344445566654

>4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens}

Probab=98.12  E-value=1.1e-05  Score=58.99  Aligned_cols=100  Identities=21%  Similarity=0.297  Sum_probs=68.7

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHH--HHHHHHHhcCCCe---eEecCCCccHHHHHHhHC-CCCccE
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKD--KVDLLKNKFGFDE---AFNYKEEPDLDAALKRYF-PEGINI   91 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~--~~~~~~~~~g~~~---v~~~~~~~~~~~~~~~~~-~~~~d~   91 (208)
                      +|+.+||+||++++|.+.++.+...|++|++++++.+  ..+.++ +.|...   ..|..+. .   .++... .+++|+
T Consensus         8 ~GKvalVTGas~GIG~aiA~~la~~Ga~Vvi~~r~~~~~~~~~~~-~~g~~~~~~~~Dv~d~-~---~v~~~~~~g~iDi   82 (247)
T 4hp8_A            8 EGRKALVTGANTGLGQAIAVGLAAAGAEVVCAARRAPDETLDIIA-KDGGNASALLIDFADP-L---AAKDSFTDAGFDI   82 (247)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHH-HTTCCEEEEECCTTST-T---TTTTSSTTTCCCE
T ss_pred             CCCEEEEeCcCCHHHHHHHHHHHHcCCEEEEEeCCcHHHHHHHHH-HhCCcEEEEEccCCCH-H---HHHHHHHhCCCCE
Confidence            5899999999999999999999999999999998743  345555 566543   2344433 1   122222 247999


Q ss_pred             EEeCCCc-hh-------------------------HHHHHHhh-c--cCCEEEEEecccc
Q 028523           92 YFENVGG-KM-------------------------LDAVLLNM-R--IQGRITLCGMISQ  122 (208)
Q Consensus        92 v~d~~g~-~~-------------------------~~~~~~~l-~--~~G~~v~~g~~~~  122 (208)
                      ++++.|. ..                         .+.+++.| +  .+|++|.+++..+
T Consensus        83 LVNNAGi~~~~~~~~~~~~~w~~~~~vNl~g~f~~~~~~~~~m~~~g~~G~IVnisS~~~  142 (247)
T 4hp8_A           83 LVNNAGIIRRADSVEFSELDWDEVMDVNLKALFFTTQAFAKELLAKGRSGKVVNIASLLS  142 (247)
T ss_dssp             EEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGG
T ss_pred             EEECCCCCCCCCcccccHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCCcEEEEEechhh
Confidence            9999872 20                         23445555 3  3699999988765

>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2

Probab=98.11  E-value=1.3e-05  Score=60.36  Aligned_cols=80  Identities=18%  Similarity=0.270  Sum_probs=55.0

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhc--------CCCe---eEecCCCccHHHHHHhHCC
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKF--------GFDE---AFNYKEEPDLDAALKRYFP   86 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~--------g~~~---v~~~~~~~~~~~~~~~~~~   86 (208)
                      .+.+++|+||+|++|...++.+...|++|++++++.++.+.+.+++        +...   ..|..+...+...+.+...
T Consensus        17 ~~k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~   96 (303)
T 1yxm_A           17 QGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVKSTLD   96 (303)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhccccCCccEEEEecCCCCHHHHHHHHHHHHH
Confidence            4689999999999999999988889999999999988766544332        2221   2344443233333333211


Q ss_pred             --CCccEEEeCCC
Q 028523           87 --EGINIYFENVG   97 (208)
Q Consensus        87 --~~~d~v~d~~g   97 (208)
                        +++|++|++.|
T Consensus        97 ~~g~id~li~~Ag  109 (303)
T 1yxm_A           97 TFGKINFLVNNGG  109 (303)
T ss_dssp             HHSCCCEEEECCC
T ss_pred             HcCCCCEEEECCC
Confidence              26999999987

>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2

Probab=98.11  E-value=8.7e-06  Score=60.87  Aligned_cols=80  Identities=13%  Similarity=0.336  Sum_probs=54.8

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhc---CCCe---eEecCCCccHHHHHHhHC--CCCc
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKF---GFDE---AFNYKEEPDLDAALKRYF--PEGI   89 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~---g~~~---v~~~~~~~~~~~~~~~~~--~~~~   89 (208)
                      .+.+++|+||+|++|...++.+...|++|+++.+++++.+.+.+++   +...   ..|..+.+.+.+.+.+..  -+++
T Consensus        43 ~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~~~i  122 (285)
T 2c07_A           43 ENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGYESSGYAGDVSKKEEISEVINKILTEHKNV  122 (285)
T ss_dssp             SSCEEEEESTTSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHCSCC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhcCCceeEEECCCCCHHHHHHHHHHHHHhcCCC
Confidence            3678999999999999999888888999999988877765544333   4322   234444323333333321  2369


Q ss_pred             cEEEeCCC
Q 028523           90 NIYFENVG   97 (208)
Q Consensus        90 d~v~d~~g   97 (208)
                      |++|++.|
T Consensus       123 d~li~~Ag  130 (285)
T 2c07_A          123 DILVNNAG  130 (285)
T ss_dssp             CEEEECCC
T ss_pred             CEEEECCC
Confidence            99999987

>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*

Probab=98.11  E-value=6.9e-06  Score=60.26  Aligned_cols=81  Identities=19%  Similarity=0.320  Sum_probs=54.4

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCC-HHHHHHHHHhc---CCC-e--eEecCCCccHHHHHHhHCC--CC
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGS-KDKVDLLKNKF---GFD-E--AFNYKEEPDLDAALKRYFP--EG   88 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s-~~~~~~~~~~~---g~~-~--v~~~~~~~~~~~~~~~~~~--~~   88 (208)
                      ++.++||+||+|++|...++.+...|++|++++++ +++.+.+.+++   +.. .  ..|..+.+.+.+.+.+...  ++
T Consensus         6 ~~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   85 (258)
T 3afn_B            6 KGKRVLITGSSQGIGLATARLFARAGAKVGLHGRKAPANIDETIASMRADGGDAAFFAADLATSEACQQLVDEFVAKFGG   85 (258)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCCTTHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHSS
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEECCCchhhHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            46789999999999999999888899999999988 66555443232   432 1  2344443233333333221  26


Q ss_pred             ccEEEeCCCc
Q 028523           89 INIYFENVGG   98 (208)
Q Consensus        89 ~d~v~d~~g~   98 (208)
                      +|++|++.|.
T Consensus        86 id~vi~~Ag~   95 (258)
T 3afn_B           86 IDVLINNAGG   95 (258)
T ss_dssp             CSEEEECCCC
T ss_pred             CCEEEECCCC
Confidence            9999998873

>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A*

Probab=98.11  E-value=1.5e-05  Score=59.81  Aligned_cols=80  Identities=10%  Similarity=0.096  Sum_probs=55.9

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEe-CCHHHHHHHHHhc----CCCe---eEecCCCc--------------
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSA-GSKDKVDLLKNKF----GFDE---AFNYKEEP--------------   75 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~-~s~~~~~~~~~~~----g~~~---v~~~~~~~--------------   75 (208)
                      .+.++||+||++++|.+.++.+...|++|++++ +++++.+.+.+++    |...   ..|..+..              
T Consensus         8 ~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   87 (291)
T 1e7w_A            8 TVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAPVSGADGSAPVT   87 (291)
T ss_dssp             CCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCCCC----CCCBC
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHHhhhcCCeeEEEEeecCCcccccccccccccccc
Confidence            478999999999999999999988999999999 9988766554333    3221   23555442              


Q ss_pred             ---cHHHHHHhHCC--CCccEEEeCCC
Q 028523           76 ---DLDAALKRYFP--EGINIYFENVG   97 (208)
Q Consensus        76 ---~~~~~~~~~~~--~~~d~v~d~~g   97 (208)
                         ++.+.+.+...  +++|++|++.|
T Consensus        88 ~~~~v~~~~~~~~~~~g~iD~lvnnAg  114 (291)
T 1e7w_A           88 LFTRCAELVAACYTHWGRCDVLVNNAS  114 (291)
T ss_dssp             HHHHHHHHHHHHHHHHSCCCEEEECCC
T ss_pred             hHHHHHHHHHHHHHhcCCCCEEEECCC
Confidence               23333332221  36999999987

>3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae}

Probab=98.10  E-value=7.4e-06  Score=60.21  Aligned_cols=104  Identities=18%  Similarity=0.239  Sum_probs=68.6

Q ss_pred             CCEEEEecCCchHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHhcCCCe---eEecCCCccHHHHHHhHCC--CCccE
Q 028523           19 GEYVFVSAASGAVGQLVGQFAKLV--GCYVVGSAGSKDKVDLLKNKFGFDE---AFNYKEEPDLDAALKRYFP--EGINI   91 (208)
Q Consensus        19 g~~vli~ga~g~vG~~a~qla~~~--g~~v~~~~~s~~~~~~~~~~~g~~~---v~~~~~~~~~~~~~~~~~~--~~~d~   91 (208)
                      |+++||+||++++|.+.++.+...  |++|+.+++++++.+.+.++++...   ..|..+.+...+.+.+...  +++|+
T Consensus         2 gk~~lVTGas~GIG~aia~~l~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~   81 (254)
T 3kzv_A            2 GKVILVTGVSRGIGKSIVDVLFSLDKDTVVYGVARSEAPLKKLKEKYGDRFFYVVGDITEDSVLKQLVNAAVKGHGKIDS   81 (254)
T ss_dssp             CCEEEECSTTSHHHHHHHHHHHHHCSSCEEEEEESCHHHHHHHHHHHGGGEEEEESCTTSHHHHHHHHHHHHHHHSCCCE
T ss_pred             CCEEEEECCCchHHHHHHHHHHhcCCCeEEEEecCCHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHhcCCccE
Confidence            578999999999999988766555  5799999999988887775665432   2344443233333333221  36999


Q ss_pred             EEeCCCc-hh--------------------------HHHHHHhhcc-CCEEEEEecccc
Q 028523           92 YFENVGG-KM--------------------------LDAVLLNMRI-QGRITLCGMISQ  122 (208)
Q Consensus        92 v~d~~g~-~~--------------------------~~~~~~~l~~-~G~~v~~g~~~~  122 (208)
                      ++++.|. ..                          .+.+++.|.. +|+++.+++...
T Consensus        82 lvnnAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~g~iv~isS~~~  140 (254)
T 3kzv_A           82 LVANAGVLEPVQNVNEIDVNAWKKLYDINFFSIVSLVGIALPELKKTNGNVVFVSSDAC  140 (254)
T ss_dssp             EEEECCCCCCCTTTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCSCC
T ss_pred             EEECCcccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEcCchh
Confidence            9998873 10                          1233444433 699999987654

>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}

Probab=98.10  E-value=1.6e-05  Score=57.59  Aligned_cols=96  Identities=19%  Similarity=0.171  Sum_probs=66.6

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCC-Cee-EecCCCccHHHHHHhHCCCCccEEEeC
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGF-DEA-FNYKEEPDLDAALKRYFPEGINIYFEN   95 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~-~~v-~~~~~~~~~~~~~~~~~~~~~d~v~d~   95 (208)
                      .|.+|||+||+|++|...++.+...|++|+++++++++.+.+. ..+. ..+ .|..      +.+.+... ++|+||++
T Consensus        20 ~~~~ilVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~-~~~~~~~~~~Dl~------~~~~~~~~-~~D~vi~~   91 (236)
T 3e8x_A           20 QGMRVLVVGANGKVARYLLSELKNKGHEPVAMVRNEEQGPELR-ERGASDIVVANLE------EDFSHAFA-SIDAVVFA   91 (236)
T ss_dssp             -CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHH-HTTCSEEEECCTT------SCCGGGGT-TCSEEEEC
T ss_pred             CCCeEEEECCCChHHHHHHHHHHhCCCeEEEEECChHHHHHHH-hCCCceEEEcccH------HHHHHHHc-CCCEEEEC
Confidence            4789999999999999999999889999999999999888777 5565 322 2222      22222222 69999999


Q ss_pred             CCchh--------------HHHHHHhhcc--CCEEEEEeccc
Q 028523           96 VGGKM--------------LDAVLLNMRI--QGRITLCGMIS  121 (208)
Q Consensus        96 ~g~~~--------------~~~~~~~l~~--~G~~v~~g~~~  121 (208)
                      .|...              ....++.+..  .++++.++...
T Consensus        92 ag~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~  133 (236)
T 3e8x_A           92 AGSGPHTGADKTILIDLWGAIKTIQEAEKRGIKRFIMVSSVG  133 (236)
T ss_dssp             CCCCTTSCHHHHHHTTTHHHHHHHHHHHHHTCCEEEEECCTT
T ss_pred             CCCCCCCCccccchhhHHHHHHHHHHHHHcCCCEEEEEecCC
Confidence            88321              1223333332  37899988754

>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}

Probab=98.10  E-value=1.1e-05  Score=59.60  Aligned_cols=80  Identities=24%  Similarity=0.366  Sum_probs=55.6

Q ss_pred             CCCEEEEecCCc-hHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhc---C-CC-e--eEecCCCccHHHHHHhHCC--C
Q 028523           18 QGEYVFVSAASG-AVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKF---G-FD-E--AFNYKEEPDLDAALKRYFP--E   87 (208)
Q Consensus        18 ~g~~vli~ga~g-~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~---g-~~-~--v~~~~~~~~~~~~~~~~~~--~   87 (208)
                      +++++||+||+| ++|...++.+...|++|++++++.++.+.+.+++   + .. .  ..|..+.+++.+.+.+...  +
T Consensus        21 ~~k~vlITGasg~GIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g  100 (266)
T 3o38_A           21 KGKVVLVTAAAGTGIGSTTARRALLEGADVVISDYHERRLGETRDQLADLGLGRVEAVVCDVTSTEAVDALITQTVEKAG  100 (266)
T ss_dssp             TTCEEEESSCSSSSHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCSSCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEECCCCCchHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhcCCCceEEEEeCCCCHHHHHHHHHHHHHHhC
Confidence            578999999985 8999999988888999999999988766655444   2 11 1  2344443233333333221  2


Q ss_pred             CccEEEeCCC
Q 028523           88 GINIYFENVG   97 (208)
Q Consensus        88 ~~d~v~d~~g   97 (208)
                      ++|++|++.|
T Consensus       101 ~id~li~~Ag  110 (266)
T 3o38_A          101 RLDVLVNNAG  110 (266)
T ss_dssp             CCCEEEECCC
T ss_pred             CCcEEEECCC
Confidence            6999999987

>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}

Probab=98.09  E-value=6.7e-06  Score=60.00  Aligned_cols=102  Identities=12%  Similarity=0.089  Sum_probs=71.7

Q ss_pred             HhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHh---cCCCeeEecCCCccHHHHHHhHCCCC
Q 028523           12 EVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNK---FGFDEAFNYKEEPDLDAALKRYFPEG   88 (208)
Q Consensus        12 ~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~---~g~~~v~~~~~~~~~~~~~~~~~~~~   88 (208)
                      ....+.++++||..|+ | .|..+..+++. +.++++++.+++..+.+++.   .+...-+..... ++.+..  ..+++
T Consensus        85 ~~~~~~~~~~vldiG~-G-~G~~~~~l~~~-~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~-d~~~~~--~~~~~  158 (248)
T 2yvl_A           85 LKLNLNKEKRVLEFGT-G-SGALLAVLSEV-AGEVWTFEAVEEFYKTAQKNLKKFNLGKNVKFFNV-DFKDAE--VPEGI  158 (248)
T ss_dssp             HHTTCCTTCEEEEECC-T-TSHHHHHHHHH-SSEEEEECSCHHHHHHHHHHHHHTTCCTTEEEECS-CTTTSC--CCTTC
T ss_pred             HhcCCCCCCEEEEeCC-C-ccHHHHHHHHh-CCEEEEEecCHHHHHHHHHHHHHcCCCCcEEEEEc-Chhhcc--cCCCc
Confidence            5567889999999995 5 69999999988 88999999999988877742   343111111111 221110  01237


Q ss_pred             ccEEEeCCCc--hhHHHHHHhhccCCEEEEEec
Q 028523           89 INIYFENVGG--KMLDAVLLNMRIQGRITLCGM  119 (208)
Q Consensus        89 ~d~v~d~~g~--~~~~~~~~~l~~~G~~v~~g~  119 (208)
                      +|+|+...+.  ..+..+.+.|+++|+++....
T Consensus       159 ~D~v~~~~~~~~~~l~~~~~~L~~gG~l~~~~~  191 (248)
T 2yvl_A          159 FHAAFVDVREPWHYLEKVHKSLMEGAPVGFLLP  191 (248)
T ss_dssp             BSEEEECSSCGGGGHHHHHHHBCTTCEEEEEES
T ss_pred             ccEEEECCcCHHHHHHHHHHHcCCCCEEEEEeC
Confidence            9999987773  578999999999999988654

>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}

Probab=98.09  E-value=1.3e-05  Score=59.87  Aligned_cols=80  Identities=10%  Similarity=0.187  Sum_probs=53.4

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeC-CHHHHHHHHHhc----CCCe---eEecCCCccHHHHHHhHC--CC
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAG-SKDKVDLLKNKF----GFDE---AFNYKEEPDLDAALKRYF--PE   87 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~-s~~~~~~~~~~~----g~~~---v~~~~~~~~~~~~~~~~~--~~   87 (208)
                      .++++||+||++++|...++.+...|++|+++++ +.++.+.+.+++    +...   ..|..+.+++.+.+.+..  -+
T Consensus        24 ~~k~~lVTGas~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g  103 (281)
T 3v2h_A           24 MTKTAVITGSTSGIGLAIARTLAKAGANIVLNGFGAPDEIRTVTDEVAGLSSGTVLHHPADMTKPSEIADMMAMVADRFG  103 (281)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEECCCCHHHHHHHHHHHHTTCSSCEEEECCCTTCHHHHHHHHHHHHHHTS
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHhhccCCcEEEEeCCCCCHHHHHHHHHHHHHHCC
Confidence            4689999999999999999999999999999998 555544443232    2221   134444323333333322  13


Q ss_pred             CccEEEeCCC
Q 028523           88 GINIYFENVG   97 (208)
Q Consensus        88 ~~d~v~d~~g   97 (208)
                      ++|+++++.|
T Consensus       104 ~iD~lv~nAg  113 (281)
T 3v2h_A          104 GADILVNNAG  113 (281)
T ss_dssp             SCSEEEECCC
T ss_pred             CCCEEEECCC
Confidence            6999999987

>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A*

Probab=98.09  E-value=1.9e-05  Score=58.13  Aligned_cols=80  Identities=20%  Similarity=0.269  Sum_probs=54.8

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHH---cCCEEEEEeCCHHHHHHHHHhc-----CCCe---eEecCCCccHHHHHHhHC-
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKL---VGCYVVGSAGSKDKVDLLKNKF-----GFDE---AFNYKEEPDLDAALKRYF-   85 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~---~g~~v~~~~~s~~~~~~~~~~~-----g~~~---v~~~~~~~~~~~~~~~~~-   85 (208)
                      ++.++||+||++++|.+.++.+..   .|++|+++++++++.+.+.+++     +...   ..|..+.+.+.+.+.+.. 
T Consensus         5 ~~k~~lVTGas~gIG~~ia~~l~~~~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   84 (259)
T 1oaa_A            5 GCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKVVLAAADLGTEAGVQRLLSAVRE   84 (259)
T ss_dssp             BSEEEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHHHHHHHHHHHHHCTTSEEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCcEEEEeCCCChHHHHHHHHHHHhhcCCCeEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEecCCCCHHHHHHHHHHHHh
Confidence            467899999999999998887776   8999999999988766554343     3221   234444323434444332 


Q ss_pred             ---CCCcc--EEEeCCC
Q 028523           86 ---PEGIN--IYFENVG   97 (208)
Q Consensus        86 ---~~~~d--~v~d~~g   97 (208)
                         .+++|  +++++.|
T Consensus        85 ~~~~g~~d~~~lvnnAg  101 (259)
T 1oaa_A           85 LPRPEGLQRLLLINNAA  101 (259)
T ss_dssp             SCCCTTCCEEEEEECCC
T ss_pred             ccccccCCccEEEECCc
Confidence               23578  9999876

>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}

Probab=98.08  E-value=2.1e-05  Score=58.66  Aligned_cols=82  Identities=12%  Similarity=0.110  Sum_probs=55.7

Q ss_pred             CCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeC-CHHHHHHHHH---hcCCCe---eEecCCCccHHHHHHhHCC--C
Q 028523           17 KQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAG-SKDKVDLLKN---KFGFDE---AFNYKEEPDLDAALKRYFP--E   87 (208)
Q Consensus        17 ~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~-s~~~~~~~~~---~~g~~~---v~~~~~~~~~~~~~~~~~~--~   87 (208)
                      ..+.++||+||++++|.+.++.+...|++|+++++ ++++.+.+.+   ..|...   ..|..+.+++.+.+.+...  +
T Consensus        27 ~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g  106 (280)
T 4da9_A           27 KARPVAIVTGGRRGIGLGIARALAASGFDIAITGIGDAEGVAPVIAELSGLGARVIFLRADLADLSSHQATVDAVVAEFG  106 (280)
T ss_dssp             CCCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCHHHHHHHHHHHHHTTCCEEEEECCTTSGGGHHHHHHHHHHHHS
T ss_pred             cCCCEEEEecCCCHHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcC
Confidence            35789999999999999999999899999999985 6555444332   234322   2355554344444443322  2


Q ss_pred             CccEEEeCCCc
Q 028523           88 GINIYFENVGG   98 (208)
Q Consensus        88 ~~d~v~d~~g~   98 (208)
                      ++|++|++.|.
T Consensus       107 ~iD~lvnnAg~  117 (280)
T 4da9_A          107 RIDCLVNNAGI  117 (280)
T ss_dssp             CCCEEEEECC-
T ss_pred             CCCEEEECCCc
Confidence            69999998874

>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2

Probab=98.08  E-value=1.7e-05  Score=60.54  Aligned_cols=80  Identities=10%  Similarity=0.096  Sum_probs=56.1

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEe-CCHHHHHHHHHhc----CCCe---eEecCCCc--------------
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSA-GSKDKVDLLKNKF----GFDE---AFNYKEEP--------------   75 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~-~s~~~~~~~~~~~----g~~~---v~~~~~~~--------------   75 (208)
                      .+.++||+||++++|.+.++.+...|++|++++ +++++.+.+.+++    +...   ..|..+..              
T Consensus        45 ~~k~~lVTGas~GIG~aia~~La~~G~~Vv~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~  124 (328)
T 2qhx_A           45 TVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAPVSGADGSAPVT  124 (328)
T ss_dssp             CCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCC-------CCBC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhhcCCeEEEEEeeCCCchhccccccccccccc
Confidence            578999999999999999999989999999999 9988766654333    3221   23555442              


Q ss_pred             ---cHHHHHHhHCC--CCccEEEeCCC
Q 028523           76 ---DLDAALKRYFP--EGINIYFENVG   97 (208)
Q Consensus        76 ---~~~~~~~~~~~--~~~d~v~d~~g   97 (208)
                         .+.+.+.+...  +++|++|++.|
T Consensus       125 ~~~~v~~~~~~~~~~~g~iD~lVnnAG  151 (328)
T 2qhx_A          125 LFTRCAELVAACYTHWGRCDVLVNNAS  151 (328)
T ss_dssp             HHHHHHHHHHHHHHHHSCCCEEEECCC
T ss_pred             cHHHHHHHHHHHHHhcCCCCEEEECCC
Confidence               23333332211  26999999987

>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*

Probab=98.08  E-value=1e-05  Score=60.52  Aligned_cols=80  Identities=15%  Similarity=0.182  Sum_probs=54.2

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCC----------------HHHHHHHHHh---cCCCe---eEecCCCc
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGS----------------KDKVDLLKNK---FGFDE---AFNYKEEP   75 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s----------------~~~~~~~~~~---~g~~~---v~~~~~~~   75 (208)
                      .|.++||+||++++|.+.++.+...|++|++++++                .++.+.+.++   .+...   ..|..+.+
T Consensus        10 ~~k~~lVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~   89 (286)
T 3uve_A           10 EGKVAFVTGAARGQGRSHAVRLAQEGADIIAVDICKPIRAGVVDTAIPASTPEDLAETADLVKGHNRRIVTAEVDVRDYD   89 (286)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCSBTTBCCCSSCCCCHHHHHHHHHHHHTTTCCEEEEECCTTCHH
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeccccccccccccccccCCHHHHHHHHHHHhhcCCceEEEEcCCCCHH
Confidence            57899999999999999999999999999999876                5555444322   23322   23444432


Q ss_pred             cHHHHHHhHCC--CCccEEEeCCC
Q 028523           76 DLDAALKRYFP--EGINIYFENVG   97 (208)
Q Consensus        76 ~~~~~~~~~~~--~~~d~v~d~~g   97 (208)
                      ++.+.+.+...  +++|++|++.|
T Consensus        90 ~v~~~~~~~~~~~g~id~lv~nAg  113 (286)
T 3uve_A           90 ALKAAVDSGVEQLGRLDIIVANAG  113 (286)
T ss_dssp             HHHHHHHHHHHHHSCCCEEEECCC
T ss_pred             HHHHHHHHHHHHhCCCCEEEECCc
Confidence            33333333222  26999999887

>2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A

Probab=98.08  E-value=1.5e-05  Score=58.04  Aligned_cols=75  Identities=13%  Similarity=0.232  Sum_probs=53.7

Q ss_pred             CCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCe-eEecCCCccHHHHHHhHCC--CCccEEEeC
Q 028523           19 GEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDE-AFNYKEEPDLDAALKRYFP--EGINIYFEN   95 (208)
Q Consensus        19 g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~-v~~~~~~~~~~~~~~~~~~--~~~d~v~d~   95 (208)
                      +.+++|+||+|++|.+.++.+...|++|+++++++++  ..+ ++|... ..|..+ ++..+.+.+...  +++|+++++
T Consensus         2 ~k~vlVTGas~giG~~~a~~l~~~G~~V~~~~r~~~~--~~~-~~~~~~~~~D~~~-~~~~~~~~~~~~~~g~id~lv~~   77 (239)
T 2ekp_A            2 ERKALVTGGSRGIGRAIAEALVARGYRVAIASRNPEE--AAQ-SLGAVPLPTDLEK-DDPKGLVKRALEALGGLHVLVHA   77 (239)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHH--HHH-HHTCEEEECCTTT-SCHHHHHHHHHHHHTSCCEEEEC
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHH--HHH-hhCcEEEecCCch-HHHHHHHHHHHHHcCCCCEEEEC
Confidence            5689999999999999999998899999999988766  233 556322 234444 255444443322  269999998


Q ss_pred             CC
Q 028523           96 VG   97 (208)
Q Consensus        96 ~g   97 (208)
                      .|
T Consensus        78 Ag   79 (239)
T 2ekp_A           78 AA   79 (239)
T ss_dssp             CC
T ss_pred             CC
Confidence            87

>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ...

Probab=98.08  E-value=1.5e-05  Score=59.65  Aligned_cols=105  Identities=20%  Similarity=0.251  Sum_probs=67.6

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHh---cCCCe----eEecCCCccHHHHHHhHCC--CC
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNK---FGFDE----AFNYKEEPDLDAALKRYFP--EG   88 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~---~g~~~----v~~~~~~~~~~~~~~~~~~--~~   88 (208)
                      ++.++||+||+|++|...++.+...|++|+++++++++.+.+.++   .|...    ..|..+...+.+.+.+...  ++
T Consensus        27 ~~k~vlITGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g~  106 (286)
T 1xu9_A           27 QGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVAQAGKLMGG  106 (286)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCSEEEEEECCTTCHHHHHHHHHHHHHHHTS
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhCCCceEEEeCCCCCHHHHHHHHHHHHHHcCC
Confidence            478999999999999999998888999999999998876655422   34322    2344433123332322211  36


Q ss_pred             ccEEEeC-CCc-h---------h---------------HHHHHHhhc-cCCEEEEEecccc
Q 028523           89 INIYFEN-VGG-K---------M---------------LDAVLLNMR-IQGRITLCGMISQ  122 (208)
Q Consensus        89 ~d~v~d~-~g~-~---------~---------------~~~~~~~l~-~~G~~v~~g~~~~  122 (208)
                      +|++|++ .|. .         .               ...+++.+. .+|+++.+++..+
T Consensus       107 iD~li~naag~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~g~iv~isS~~~  167 (286)
T 1xu9_A          107 LDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQSNGSIVVVSSLAG  167 (286)
T ss_dssp             CSEEEECCCCCCCCCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEGGG
T ss_pred             CCEEEECCccCCCCccccCCHHHHHHHHHHHhhHHHHHHHHHHHHHHHCCCEEEEECCccc
Confidence            9999998 442 1         0               122334443 4689999987654

>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens}

Probab=98.08  E-value=1.3e-05  Score=59.06  Aligned_cols=80  Identities=13%  Similarity=0.108  Sum_probs=54.3

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcC----------C-Ce--eEecCCCccHHHHHHhH
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFG----------F-DE--AFNYKEEPDLDAALKRY   84 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g----------~-~~--v~~~~~~~~~~~~~~~~   84 (208)
                      .+.++||+||+|++|...++.+...|++|+++++++++.+.+.+++.          . ..  ..|..+.+.+.+.+...
T Consensus         6 ~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~   85 (264)
T 2pd6_A            6 RSALALVTGAGSGIGRAVSVRLAGEGATVAACDLDRAAAQETVRLLGGPGSKEGPPRGNHAAFQADVSEARAARCLLEQV   85 (264)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTC------------CCEEEECCTTSHHHHHHHHHHH
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCccccccCcceEEEEecCCCHHHHHHHHHHH
Confidence            46789999999999999999888899999999999887766543332          1 11  23444332233333332


Q ss_pred             CC--CCc-cEEEeCCC
Q 028523           85 FP--EGI-NIYFENVG   97 (208)
Q Consensus        85 ~~--~~~-d~v~d~~g   97 (208)
                      ..  +++ |++|++.|
T Consensus        86 ~~~~g~i~d~vi~~Ag  101 (264)
T 2pd6_A           86 QACFSRPPSVVVSCAG  101 (264)
T ss_dssp             HHHHSSCCSEEEECCC
T ss_pred             HHHhCCCCeEEEECCC
Confidence            11  246 99999887

>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A

Probab=98.08  E-value=3.8e-06  Score=61.52  Aligned_cols=75  Identities=16%  Similarity=0.177  Sum_probs=51.6

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHHHHhHCC--CCccEEEeC
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFP--EGINIYFEN   95 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~--~~~d~v~d~   95 (208)
                      .+.++||+||+|++|...++.+...|++|+++++++++.+.+.   +  ...|..+.+.+.+.+.+...  +++|++|++
T Consensus        14 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~---~--~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~   88 (247)
T 1uzm_A           14 VSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAPKGLF---G--VEVDVTDSDAVDRAFTAVEEHQGPVEVLVSN   88 (247)
T ss_dssp             CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSSCCCTTSE---E--EECCTTCHHHHHHHHHHHHHHHSSCSEEEEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHhc---C--eeccCCCHHHHHHHHHHHHHHcCCCCEEEEC
Confidence            5789999999999999999988889999999998765433221   1  23444443233333333221  368999998


Q ss_pred             CC
Q 028523           96 VG   97 (208)
Q Consensus        96 ~g   97 (208)
                      .|
T Consensus        89 Ag   90 (247)
T 1uzm_A           89 AG   90 (247)
T ss_dssp             CS
T ss_pred             CC
Confidence            87

>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A

Probab=98.08  E-value=2.3e-05  Score=57.77  Aligned_cols=80  Identities=16%  Similarity=0.320  Sum_probs=54.6

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhc---CCCe---eEecCCCccHHHHHHh---HCCCC
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKF---GFDE---AFNYKEEPDLDAALKR---YFPEG   88 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~---g~~~---v~~~~~~~~~~~~~~~---~~~~~   88 (208)
                      .+.++||+||+|++|...++.+...|++|+++++++++.+.+.+++   +...   ..|..+.+.+.+.+.+   ..+++
T Consensus        13 ~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   92 (266)
T 1xq1_A           13 KAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQVTGSVCDASLRPEREKLMQTVSSMFGGK   92 (266)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHTTC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeeEEEECCCCCHHHHHHHHHHHHHHhCCC
Confidence            5689999999999999999998889999999999987765543232   4321   2343332122222222   22246


Q ss_pred             ccEEEeCCC
Q 028523           89 INIYFENVG   97 (208)
Q Consensus        89 ~d~v~d~~g   97 (208)
                      +|++|++.|
T Consensus        93 id~li~~Ag  101 (266)
T 1xq1_A           93 LDILINNLG  101 (266)
T ss_dssp             CSEEEEECC
T ss_pred             CcEEEECCC
Confidence            999999887

>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*

Probab=98.07  E-value=1.5e-05  Score=59.08  Aligned_cols=80  Identities=16%  Similarity=0.238  Sum_probs=53.6

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeC-CHHHHHHHHH---hcCCCe---eEecCCCccHHHHHHhHCC--CC
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAG-SKDKVDLLKN---KFGFDE---AFNYKEEPDLDAALKRYFP--EG   88 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~-s~~~~~~~~~---~~g~~~---v~~~~~~~~~~~~~~~~~~--~~   88 (208)
                      .++++||+||++++|.+.++.+...|++|+++++ +.+..+.+.+   ..+...   ..|..+.+++.+.+.+...  ++
T Consensus        27 ~~k~vlVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~v~~~~~~~~~~~g~  106 (269)
T 4dmm_A           27 TDRIALVTGASRGIGRAIALELAAAGAKVAVNYASSAGAADEVVAAIAAAGGEAFAVKADVSQESEVEALFAAVIERWGR  106 (269)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            5789999999999999999999899999999887 5554444332   334322   2344443233333333222  26


Q ss_pred             ccEEEeCCC
Q 028523           89 INIYFENVG   97 (208)
Q Consensus        89 ~d~v~d~~g   97 (208)
                      +|+++++.|
T Consensus       107 id~lv~nAg  115 (269)
T 4dmm_A          107 LDVLVNNAG  115 (269)
T ss_dssp             CCEEEECCC
T ss_pred             CCEEEECCC
Confidence            999999987

>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}

Probab=98.07  E-value=0.00013  Score=48.47  Aligned_cols=95  Identities=16%  Similarity=0.109  Sum_probs=67.1

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeE-ecCCCccHHHHHHhHCCCCccEEEeCC
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAF-NYKEEPDLDAALKRYFPEGINIYFENV   96 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~v~-~~~~~~~~~~~~~~~~~~~~d~v~d~~   96 (208)
                      -.++|+|.|+ |.+|...++.++..|.+|+++++++++.+.++ +.|...+. |..+    .+.+++..-.++|.++.++
T Consensus         6 ~~~~viIiG~-G~~G~~la~~L~~~g~~v~vid~~~~~~~~~~-~~g~~~i~gd~~~----~~~l~~a~i~~ad~vi~~~   79 (140)
T 3fwz_A            6 ICNHALLVGY-GRVGSLLGEKLLASDIPLVVIETSRTRVDELR-ERGVRAVLGNAAN----EEIMQLAHLECAKWLILTI   79 (140)
T ss_dssp             CCSCEEEECC-SHHHHHHHHHHHHTTCCEEEEESCHHHHHHHH-HTTCEEEESCTTS----HHHHHHTTGGGCSEEEECC
T ss_pred             CCCCEEEECc-CHHHHHHHHHHHHCCCCEEEEECCHHHHHHHH-HcCCCEEECCCCC----HHHHHhcCcccCCEEEEEC
Confidence            3568999995 99999999999999999999999999999998 77775433 2222    2233332222689999999


Q ss_pred             Cchh----HHHHHHhhccCCEEEEEe
Q 028523           97 GGKM----LDAVLLNMRIQGRITLCG  118 (208)
Q Consensus        97 g~~~----~~~~~~~l~~~G~~v~~g  118 (208)
                      +.+.    .....+.+.+..+++...
T Consensus        80 ~~~~~n~~~~~~a~~~~~~~~iiar~  105 (140)
T 3fwz_A           80 PNGYEAGEIVASARAKNPDIEIIARA  105 (140)
T ss_dssp             SCHHHHHHHHHHHHHHCSSSEEEEEE
T ss_pred             CChHHHHHHHHHHHHHCCCCeEEEEE
Confidence            8642    223445566677766543

>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0

Probab=98.06  E-value=1.9e-05  Score=58.85  Aligned_cols=80  Identities=16%  Similarity=0.210  Sum_probs=53.7

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCC------------HHHHHHHHH---hcCCCe---eEecCCCccHHH
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGS------------KDKVDLLKN---KFGFDE---AFNYKEEPDLDA   79 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s------------~~~~~~~~~---~~g~~~---v~~~~~~~~~~~   79 (208)
                      .|+++||+||++++|.+.++.+...|++|++++++            .++.+...+   ..|...   ..|..+.+++.+
T Consensus         9 ~~k~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~   88 (281)
T 3s55_A            9 EGKTALITGGARGMGRSHAVALAEAGADIAICDRCENSDVVGYPLATADDLAETVALVEKTGRRCISAKVDVKDRAALES   88 (281)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHH
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCccccccccccccHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHH
Confidence            57899999999999999999999999999999986            444333221   344432   234444323333


Q ss_pred             HHHhHCC--CCccEEEeCCC
Q 028523           80 ALKRYFP--EGINIYFENVG   97 (208)
Q Consensus        80 ~~~~~~~--~~~d~v~d~~g   97 (208)
                      .+.+...  +++|+++++.|
T Consensus        89 ~~~~~~~~~g~id~lv~nAg  108 (281)
T 3s55_A           89 FVAEAEDTLGGIDIAITNAG  108 (281)
T ss_dssp             HHHHHHHHHTCCCEEEECCC
T ss_pred             HHHHHHHhcCCCCEEEECCC
Confidence            3333221  26999999987

>3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster}

Probab=98.06  E-value=2e-05  Score=65.17  Aligned_cols=105  Identities=21%  Similarity=0.253  Sum_probs=63.5

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeC---------CHHHHHHHHH---hcCCCeeEecCCCccHHHHHHhHC
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAG---------SKDKVDLLKN---KFGFDEAFNYKEEPDLDAALKRYF   85 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~---------s~~~~~~~~~---~~g~~~v~~~~~~~~~~~~~~~~~   85 (208)
                      .|+++||+||++++|.+.++.+...|++|+++++         +.++.+.+.+   ..+...+.|..+..+..+.+.+..
T Consensus        18 ~gk~~lVTGas~GIG~aiA~~La~~Ga~Vv~~~r~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~D~~d~~~~~~~~~~~~   97 (613)
T 3oml_A           18 DGRVAVVTGAGAGLGREYALLFAERGAKVVVNDLGGTHSGDGASQRAADIVVDEIRKAGGEAVADYNSVIDGAKVIETAI   97 (613)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEC--------------CHHHHHHHHHHTTCCEEECCCCGGGHHHHHC---
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcccccccCCHHHHHHHHHHHHHhCCeEEEEeCCHHHHHHHHHHHH
Confidence            5789999999999999999988889999999876         4443333322   345555666665434444444443


Q ss_pred             CC--CccEEEeCCCc-h-------------------------hHHHHHHhhcc--CCEEEEEecccc
Q 028523           86 PE--GINIYFENVGG-K-------------------------MLDAVLLNMRI--QGRITLCGMISQ  122 (208)
Q Consensus        86 ~~--~~d~v~d~~g~-~-------------------------~~~~~~~~l~~--~G~~v~~g~~~~  122 (208)
                      ..  ++|++|++.|. .                         ..+.++..|..  +|++|.+++..+
T Consensus        98 ~~~g~iDiLVnnAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~l~~~~~p~m~~~~~g~IV~isS~a~  164 (613)
T 3oml_A           98 KAFGRVDILVNNAGILRDRSLVKTSEQDWNLVNDVHLKGSFKCTQAAFPYMKKQNYGRIIMTSSNSG  164 (613)
T ss_dssp             -------CEECCCCCCCCCCSTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEECCHHH
T ss_pred             HHCCCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCEEEEECCHHH
Confidence            32  69999999872 1                         02345555544  489999887543

>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*

Probab=98.05  E-value=3.3e-05  Score=57.85  Aligned_cols=76  Identities=20%  Similarity=0.203  Sum_probs=54.6

Q ss_pred             CCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhc----CCC-eeEecCCCccHHHHHHhHCCCCccE
Q 028523           17 KQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKF----GFD-EAFNYKEEPDLDAALKRYFPEGINI   91 (208)
Q Consensus        17 ~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~----g~~-~v~~~~~~~~~~~~~~~~~~~~~d~   91 (208)
                      -+|.+++|+||+|++|.++++.+...|++|+++.++.++.+.+.+++    +.. ...|..+.    +.+.+... .+|+
T Consensus       117 l~gk~vlVtGaaGGiG~aia~~L~~~G~~V~i~~R~~~~~~~l~~~~~~~~~~~~~~~D~~~~----~~~~~~~~-~~Dv  191 (287)
T 1lu9_A          117 VKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKRFKVNVTAAETADD----ASRAEAVK-GAHF  191 (287)
T ss_dssp             CTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHHTCCCEEEECCSH----HHHHHHTT-TCSE
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEECCHHHHHHHHHHHHhcCCcEEEEecCCCH----HHHHHHHH-hCCE
Confidence            46789999999999999999999999999999999988766554343    322 23454432    12333322 3899


Q ss_pred             EEeCCC
Q 028523           92 YFENVG   97 (208)
Q Consensus        92 v~d~~g   97 (208)
                      +++++|
T Consensus       192 lVn~ag  197 (287)
T 1lu9_A          192 VFTAGA  197 (287)
T ss_dssp             EEECCC
T ss_pred             EEECCC
Confidence            999997

>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}

Probab=98.05  E-value=2e-05  Score=59.32  Aligned_cols=80  Identities=14%  Similarity=0.193  Sum_probs=53.9

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCC------------HHHHHHHHH---hcCCCe---eEecCCCccHHH
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGS------------KDKVDLLKN---KFGFDE---AFNYKEEPDLDA   79 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s------------~~~~~~~~~---~~g~~~---v~~~~~~~~~~~   79 (208)
                      .|.++||+||++++|.+.++.+...|++|++++++            .++.+.+.+   ..|...   ..|..+.+++.+
T Consensus        27 ~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~  106 (299)
T 3t7c_A           27 EGKVAFITGAARGQGRSHAITLAREGADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEALGRRIIASQVDVRDFDAMQA  106 (299)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEecccccccccccccCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHH
Confidence            57899999999999999999998999999999876            444443322   344432   234444323333


Q ss_pred             HHHhHCC--CCccEEEeCCC
Q 028523           80 ALKRYFP--EGINIYFENVG   97 (208)
Q Consensus        80 ~~~~~~~--~~~d~v~d~~g   97 (208)
                      .+.+...  +++|++|++.|
T Consensus       107 ~~~~~~~~~g~iD~lv~nAg  126 (299)
T 3t7c_A          107 AVDDGVTQLGRLDIVLANAA  126 (299)
T ss_dssp             HHHHHHHHHSCCCEEEECCC
T ss_pred             HHHHHHHHhCCCCEEEECCC
Confidence            3333222  36999999887

>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli}

Probab=98.05  E-value=1.6e-05  Score=58.21  Aligned_cols=75  Identities=16%  Similarity=0.311  Sum_probs=52.0

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCe-eEecCCCccHHHHHHhHC--CCCccEEEe
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDE-AFNYKEEPDLDAALKRYF--PEGINIYFE   94 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~-v~~~~~~~~~~~~~~~~~--~~~~d~v~d   94 (208)
                      .+.++||+||+|++|...++.+...|++|++++++++.    . +.+... ..|..+.+++.+.+.+..  -+++|++|+
T Consensus         6 ~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~----~-~~~~~~~~~D~~d~~~~~~~~~~~~~~~g~id~lv~   80 (250)
T 2fwm_X            6 SGKNVWVTGAGKGIGYATALAFVEAGAKVTGFDQAFTQ----E-QYPFATEVMDVADAAQVAQVCQRLLAETERLDALVN   80 (250)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCCCS----S-CCSSEEEECCTTCHHHHHHHHHHHHHHCSCCCEEEE
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCchhh----h-cCCceEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence            46889999999999999999998999999999987652    2 344221 234444323333333322  136999999


Q ss_pred             CCC
Q 028523           95 NVG   97 (208)
Q Consensus        95 ~~g   97 (208)
                      +.|
T Consensus        81 ~Ag   83 (250)
T 2fwm_X           81 AAG   83 (250)
T ss_dssp             CCC
T ss_pred             CCC
Confidence            987

>1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A*

Probab=98.05  E-value=1.8e-05  Score=60.21  Aligned_cols=80  Identities=21%  Similarity=0.263  Sum_probs=54.5

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEe---------CCHHHHHHHHH---hcCCCeeEecCCCccHHHHHHhHC
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSA---------GSKDKVDLLKN---KFGFDEAFNYKEEPDLDAALKRYF   85 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~---------~s~~~~~~~~~---~~g~~~v~~~~~~~~~~~~~~~~~   85 (208)
                      .|.++||+||+|++|...++.+...|++|++++         ++.++.+.+.+   ..+...+.|..+..+....+.+..
T Consensus         8 ~gk~~lVTGas~GIG~~~a~~La~~Ga~Vv~~~~~~~~~~~~R~~~~~~~~~~~l~~~~~~~~~D~~~~~~~~~~~~~~~   87 (319)
T 1gz6_A            8 DGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGGKAVANYDSVEAGEKLVKTAL   87 (319)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSCBCCSHHHHHHHHHHHHTTCEEEEECCCGGGHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCcccccccCCHHHHHHHHHHHHhhCCeEEEeCCCHHHHHHHHHHHH
Confidence            578999999999999999998888999999964         34554443322   234444566666534433333321


Q ss_pred             --CCCccEEEeCCC
Q 028523           86 --PEGINIYFENVG   97 (208)
Q Consensus        86 --~~~~d~v~d~~g   97 (208)
                        -+++|++|++.|
T Consensus        88 ~~~g~iD~lVnnAG  101 (319)
T 1gz6_A           88 DTFGRIDVVVNNAG  101 (319)
T ss_dssp             HHTSCCCEEEECCC
T ss_pred             HHcCCCCEEEECCC
Confidence              236999999987

>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ...

Probab=98.05  E-value=1.4e-05  Score=59.86  Aligned_cols=80  Identities=11%  Similarity=0.165  Sum_probs=54.0

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCH-HHHHHHHHhc----CCCe---eEecCC----CccHHHHHHhHC
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSK-DKVDLLKNKF----GFDE---AFNYKE----EPDLDAALKRYF   85 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~-~~~~~~~~~~----g~~~---v~~~~~----~~~~~~~~~~~~   85 (208)
                      .+.++||+||++++|.+.++.+...|++|+++++++ ++.+.+.+++    +...   ..|..+    ...+.+.+.+..
T Consensus        22 ~~k~~lVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~~~~~v~~~~~~~~  101 (288)
T 2x9g_A           22 EAPAAVVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADELNKERSNTAVVCQADLTNSNVLPASCEEIINSCF  101 (288)
T ss_dssp             CCCEEEETTCSSHHHHHHHHHHHHHTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSCSTTHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHHHhhcCCceEEEEeecCCccCCHHHHHHHHHHHH
Confidence            578999999999999999998888999999999987 6655443232    3221   234444    212222233221


Q ss_pred             C--CCccEEEeCCC
Q 028523           86 P--EGINIYFENVG   97 (208)
Q Consensus        86 ~--~~~d~v~d~~g   97 (208)
                      .  +++|++|++.|
T Consensus       102 ~~~g~iD~lvnnAG  115 (288)
T 2x9g_A          102 RAFGRCDVLVNNAS  115 (288)
T ss_dssp             HHHSCCCEEEECCC
T ss_pred             HhcCCCCEEEECCC
Confidence            1  36999999887

>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=98.05  E-value=2e-05  Score=57.61  Aligned_cols=77  Identities=18%  Similarity=0.331  Sum_probs=54.2

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCe--eEecCCCccHHHHHHhHCCCCccEEEeC
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDE--AFNYKEEPDLDAALKRYFPEGINIYFEN   95 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~--v~~~~~~~~~~~~~~~~~~~~~d~v~d~   95 (208)
                      ++.++||+||+|++|...++.+...|++|+++++++++.+.+. +++...  ..|..+.+.+. .+.+.. +++|++|++
T Consensus         5 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~-~~~~~~~~~~D~~~~~~~~-~~~~~~-~~id~lv~~   81 (246)
T 2ag5_A            5 DGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELE-KYPGIQTRVLDVTKKKQID-QFANEV-ERLDVLFNV   81 (246)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHGGGG-GSTTEEEEECCTTCHHHHH-HHHHHC-SCCSEEEEC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-hccCceEEEeeCCCHHHHH-HHHHHh-CCCCEEEEC
Confidence            4789999999999999999999889999999999987766554 443112  23444431222 222222 369999998


Q ss_pred             CC
Q 028523           96 VG   97 (208)
Q Consensus        96 ~g   97 (208)
                      .|
T Consensus        82 Ag   83 (246)
T 2ag5_A           82 AG   83 (246)
T ss_dssp             CC
T ss_pred             Cc
Confidence            87

>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}

Probab=98.04  E-value=4.1e-05  Score=54.34  Aligned_cols=99  Identities=18%  Similarity=0.279  Sum_probs=69.5

Q ss_pred             HhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH---hcCCC-e--eEecCCCccHHHHHHhHC
Q 028523           12 EVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKN---KFGFD-E--AFNYKEEPDLDAALKRYF   85 (208)
Q Consensus        12 ~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~---~~g~~-~--v~~~~~~~~~~~~~~~~~   85 (208)
                      ....+.++++||-.|+ | .|..++.+++. +.+|++++.+++..+.+++   .+|.. .  ++..    +..+.+..  
T Consensus        49 ~~l~~~~~~~vLDlGc-G-~G~~~~~la~~-~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~----d~~~~~~~--  119 (204)
T 3njr_A           49 AALAPRRGELLWDIGG-G-SGSVSVEWCLA-GGRAITIEPRADRIENIQKNIDTYGLSPRMRAVQG----TAPAALAD--  119 (204)
T ss_dssp             HHHCCCTTCEEEEETC-T-TCHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEES----CTTGGGTT--
T ss_pred             HhcCCCCCCEEEEecC-C-CCHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEeC----chhhhccc--
Confidence            4567889999999984 4 48888888888 8899999999998877764   24544 2  2222    22111111  


Q ss_pred             CCCccEEEeCCCc--hhHHHHHHhhccCCEEEEEec
Q 028523           86 PEGINIYFENVGG--KMLDAVLLNMRIQGRITLCGM  119 (208)
Q Consensus        86 ~~~~d~v~d~~g~--~~~~~~~~~l~~~G~~v~~g~  119 (208)
                      .+.+|+|+...+.  +.+..+.+.|+|+|+++....
T Consensus       120 ~~~~D~v~~~~~~~~~~l~~~~~~LkpgG~lv~~~~  155 (204)
T 3njr_A          120 LPLPEAVFIGGGGSQALYDRLWEWLAPGTRIVANAV  155 (204)
T ss_dssp             SCCCSEEEECSCCCHHHHHHHHHHSCTTCEEEEEEC
T ss_pred             CCCCCEEEECCcccHHHHHHHHHhcCCCcEEEEEec
Confidence            1269999976552  268889999999999987654

>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2

Probab=98.04  E-value=1.6e-05  Score=57.89  Aligned_cols=79  Identities=11%  Similarity=0.153  Sum_probs=54.1

Q ss_pred             CCEEEEecCCchHHHHHHHHHHHcCC-------EEEEEeCCHHHHHHHHHhc---CCC-e--eEecCCCccHHHHHHhHC
Q 028523           19 GEYVFVSAASGAVGQLVGQFAKLVGC-------YVVGSAGSKDKVDLLKNKF---GFD-E--AFNYKEEPDLDAALKRYF   85 (208)
Q Consensus        19 g~~vli~ga~g~vG~~a~qla~~~g~-------~v~~~~~s~~~~~~~~~~~---g~~-~--v~~~~~~~~~~~~~~~~~   85 (208)
                      +.++||+||+|++|...++.+...|+       +|+++++++++.+.+.+++   +.. .  ..|..+...+...+.+..
T Consensus         2 ~k~vlITGasggiG~~la~~l~~~G~~~~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~   81 (244)
T 2bd0_A            2 KHILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTITADISDMADVRRLTTHIV   81 (244)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTTTCEEEEEECCTTSHHHHHHHHHHHH
T ss_pred             CCEEEEECCCChHHHHHHHHHHHhcCcccccceEEEEEeCCHHHHHHHHHHHHccCCeeeEEEecCCCHHHHHHHHHHHH
Confidence            56899999999999999988888898       9999999988776654343   332 1  234443312333333221


Q ss_pred             --CCCccEEEeCCC
Q 028523           86 --PEGINIYFENVG   97 (208)
Q Consensus        86 --~~~~d~v~d~~g   97 (208)
                        -+++|++|++.|
T Consensus        82 ~~~g~id~li~~Ag   95 (244)
T 2bd0_A           82 ERYGHIDCLVNNAG   95 (244)
T ss_dssp             HHTSCCSEEEECCC
T ss_pred             HhCCCCCEEEEcCC
Confidence              136999999887

>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}

Probab=98.04  E-value=9.7e-06  Score=60.64  Aligned_cols=79  Identities=20%  Similarity=0.294  Sum_probs=53.8

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHH-----------HHHHHHhcCCCe---eEecCCCccHHHHHHh
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDK-----------VDLLKNKFGFDE---AFNYKEEPDLDAALKR   83 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~-----------~~~~~~~~g~~~---v~~~~~~~~~~~~~~~   83 (208)
                      ++.++||+||++++|.+.++.+...|++|+++++++++           .+.+. ..+...   ..|..+.+++.+.+.+
T Consensus         8 ~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~Dv~~~~~v~~~~~~   86 (285)
T 3sc4_A            8 RGKTMFISGGSRGIGLAIAKRVAADGANVALVAKSAEPHPKLPGTIYTAAKEIE-EAGGQALPIVGDIRDGDAVAAAVAK   86 (285)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHH-HHTSEEEEEECCTTSHHHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECChhhhhhhhHHHHHHHHHHH-hcCCcEEEEECCCCCHHHHHHHHHH
Confidence            57899999999999999999888889999999988752           22233 344422   2354443233333333


Q ss_pred             HCC--CCccEEEeCCC
Q 028523           84 YFP--EGINIYFENVG   97 (208)
Q Consensus        84 ~~~--~~~d~v~d~~g   97 (208)
                      ...  +++|++|++.|
T Consensus        87 ~~~~~g~id~lvnnAg  102 (285)
T 3sc4_A           87 TVEQFGGIDICVNNAS  102 (285)
T ss_dssp             HHHHHSCCSEEEECCC
T ss_pred             HHHHcCCCCEEEECCC
Confidence            322  26999999987

>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}

Probab=98.04  E-value=2.1e-05  Score=58.46  Aligned_cols=105  Identities=15%  Similarity=0.206  Sum_probs=67.9

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCC------------HHHHHHHHH---hcCCCe---eEecCCCccHHH
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGS------------KDKVDLLKN---KFGFDE---AFNYKEEPDLDA   79 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s------------~~~~~~~~~---~~g~~~---v~~~~~~~~~~~   79 (208)
                      .|.++||+||++++|.+.++.+...|++|++++++            .++.+.+.+   ..+...   ..|..+.+++.+
T Consensus        12 ~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~   91 (278)
T 3sx2_A           12 TGKVAFITGAARGQGRAHAVRLAADGADIIAVDLCDQIASVPYPLATPEELAATVKLVEDIGSRIVARQADVRDRESLSA   91 (278)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHHTCCEEEEECCTTCHHHHHH
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecccccccccccccchHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHH
Confidence            57899999999999999999998999999999876            454443321   334332   234444323333


Q ss_pred             HHHhHCC--CCccEEEeCCCch----------------------hHHHHHHhhcc---CCEEEEEecccc
Q 028523           80 ALKRYFP--EGINIYFENVGGK----------------------MLDAVLLNMRI---QGRITLCGMISQ  122 (208)
Q Consensus        80 ~~~~~~~--~~~d~v~d~~g~~----------------------~~~~~~~~l~~---~G~~v~~g~~~~  122 (208)
                      .+.+...  +++|++|++.|..                      ..+.+++.|..   +|+++.+++...
T Consensus        92 ~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~  161 (278)
T 3sx2_A           92 ALQAGLDELGRLDIVVANAGIAPMSAGDDGWHDVIDVNLTGVYHTIKVAIPTLVKQGTGGSIVLISSSAG  161 (278)
T ss_dssp             HHHHHHHHHCCCCEEEECCCCCCCSSTHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGG
T ss_pred             HHHHHHHHcCCCCEEEECCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEEccHHh
Confidence            3333222  3699999998721                      12334444533   689999987654

>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti}

Probab=98.03  E-value=1.9e-05  Score=60.22  Aligned_cols=105  Identities=19%  Similarity=0.276  Sum_probs=66.6

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCC-----HHHHHHHHH---hcCCCe---eEecCCCccHHHHHHhHCC
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGS-----KDKVDLLKN---KFGFDE---AFNYKEEPDLDAALKRYFP   86 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s-----~~~~~~~~~---~~g~~~---v~~~~~~~~~~~~~~~~~~   86 (208)
                      .+.++||+||+|++|...++.+...|++|++++++     .++.+.+.+   ..+...   ..|..+...+.+.+.+...
T Consensus         4 ~~k~vlVTGas~GIG~aia~~L~~~G~~V~~~~r~~~~r~~~~~~~l~~~~~~~~~~~~~~~~Dvtd~~~v~~~~~~~~~   83 (324)
T 3u9l_A            4 SKKIILITGASSGFGRLTAEALAGAGHRVYASMRDIVGRNASNVEAIAGFARDNDVDLRTLELDVQSQVSVDRAIDQIIG   83 (324)
T ss_dssp             -CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCTTTTTHHHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEecCcccccCHHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHH
Confidence            36789999999999999999999999999998876     333333321   234321   2344443234444443322


Q ss_pred             --CCccEEEeCCCc-h-------------------------hHHHHHHhhc--cCCEEEEEecccc
Q 028523           87 --EGINIYFENVGG-K-------------------------MLDAVLLNMR--IQGRITLCGMISQ  122 (208)
Q Consensus        87 --~~~d~v~d~~g~-~-------------------------~~~~~~~~l~--~~G~~v~~g~~~~  122 (208)
                        +++|+++++.|. .                         ..+.+++.|+  ..|+++.+++...
T Consensus        84 ~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~a~lp~m~~~~~g~iV~isS~~~  149 (324)
T 3u9l_A           84 EDGRIDVLIHNAGHMVFGPAEAFTPEQFAELYDINVLSTQRVNRAALPHMRRQKHGLLIWISSSSS  149 (324)
T ss_dssp             HHSCCSEEEECCCCCBCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGG
T ss_pred             HcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEecchh
Confidence              369999999882 1                         0233444454  3689999887654

>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}

Probab=98.03  E-value=6.1e-05  Score=53.73  Aligned_cols=92  Identities=17%  Similarity=0.153  Sum_probs=64.1

Q ss_pred             EEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCe-eEecCCCccHHHHHHhHCCCCccEEEeCCCch
Q 028523           21 YVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDE-AFNYKEEPDLDAALKRYFPEGINIYFENVGGK   99 (208)
Q Consensus        21 ~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~-v~~~~~~~~~~~~~~~~~~~~~d~v~d~~g~~   99 (208)
                      +|||+||+|.+|...++.+...|.+|++++|++++.+.+.  -+... ..|..+. +. +.+     .++|+||++.|..
T Consensus         2 kvlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~--~~~~~~~~D~~d~-~~-~~~-----~~~d~vi~~ag~~   72 (221)
T 3ew7_A            2 KIGIIGATGRAGSRILEEAKNRGHEVTAIVRNAGKITQTH--KDINILQKDIFDL-TL-SDL-----SDQNVVVDAYGIS   72 (221)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCSHHHHHHC--SSSEEEECCGGGC-CH-HHH-----TTCSEEEECCCSS
T ss_pred             eEEEEcCCchhHHHHHHHHHhCCCEEEEEEcCchhhhhcc--CCCeEEeccccCh-hh-hhh-----cCCCEEEECCcCC
Confidence            5899999999999999999999999999999987766442  23322 2344443 22 222     2599999999842


Q ss_pred             ---------hHHHHHHhhcc--CCEEEEEeccc
Q 028523          100 ---------MLDAVLLNMRI--QGRITLCGMIS  121 (208)
Q Consensus       100 ---------~~~~~~~~l~~--~G~~v~~g~~~  121 (208)
                               .....++.++.  .++++.+++..
T Consensus        73 ~~~~~~~~~~~~~l~~a~~~~~~~~~v~~SS~~  105 (221)
T 3ew7_A           73 PDEAEKHVTSLDHLISVLNGTVSPRLLVVGGAA  105 (221)
T ss_dssp             TTTTTSHHHHHHHHHHHHCSCCSSEEEEECCCC
T ss_pred             ccccchHHHHHHHHHHHHHhcCCceEEEEecce
Confidence                     23456666655  47888887643

>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A

Probab=98.03  E-value=2.1e-05  Score=58.31  Aligned_cols=80  Identities=25%  Similarity=0.387  Sum_probs=53.1

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCC-HHHHHHHHH---hcCCCe-e--EecCCCccHHHHHHhHCC--CC
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGS-KDKVDLLKN---KFGFDE-A--FNYKEEPDLDAALKRYFP--EG   88 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s-~~~~~~~~~---~~g~~~-v--~~~~~~~~~~~~~~~~~~--~~   88 (208)
                      .|.++||+||++++|...++.+...|++|++++++ ++..+.+.+   +.+... +  .|..+..++.+.+.+...  ++
T Consensus        28 ~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~  107 (271)
T 4iin_A           28 TGKNVLITGASKGIGAEIAKTLASMGLKVWINYRSNAEVADALKNELEEKGYKAAVIKFDAASESDFIEAIQTIVQSDGG  107 (271)
T ss_dssp             SCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHhcCC
Confidence            57899999999999999999888899999999984 443333322   334332 2  344433233333333322  26


Q ss_pred             ccEEEeCCC
Q 028523           89 INIYFENVG   97 (208)
Q Consensus        89 ~d~v~d~~g   97 (208)
                      +|++|++.|
T Consensus       108 id~li~nAg  116 (271)
T 4iin_A          108 LSYLVNNAG  116 (271)
T ss_dssp             CCEEEECCC
T ss_pred             CCEEEECCC
Confidence            999999987

>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A*

Probab=98.03  E-value=2e-05  Score=58.06  Aligned_cols=80  Identities=16%  Similarity=0.216  Sum_probs=53.6

Q ss_pred             CCCEEEEecCC--chHHHHHHHHHHHcCCEEEEEeCCHH---HHHHHHHhcCCCe--eEecCCCccHHHHHHhHCC--CC
Q 028523           18 QGEYVFVSAAS--GAVGQLVGQFAKLVGCYVVGSAGSKD---KVDLLKNKFGFDE--AFNYKEEPDLDAALKRYFP--EG   88 (208)
Q Consensus        18 ~g~~vli~ga~--g~vG~~a~qla~~~g~~v~~~~~s~~---~~~~~~~~~g~~~--v~~~~~~~~~~~~~~~~~~--~~   88 (208)
                      .+.++||+||+  |++|...++.+...|++|++++++++   ..+.+.++.+...  ..|..+.+.+.+.+.+...  ++
T Consensus         7 ~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~   86 (261)
T 2wyu_A            7 SGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRPEAEKLAEALGGALLFRADVTQDEELDALFAGVKEAFGG   86 (261)
T ss_dssp             TTCEEEEESCCSSSSHHHHHHHHHHHHTCEEEEEESCGGGHHHHHHHHHHTTCCEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred             CCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCcEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            46889999998  99999999888888999999998875   3334432344322  2344443233333333221  26


Q ss_pred             ccEEEeCCC
Q 028523           89 INIYFENVG   97 (208)
Q Consensus        89 ~d~v~d~~g   97 (208)
                      +|++|++.|
T Consensus        87 iD~lv~~Ag   95 (261)
T 2wyu_A           87 LDYLVHAIA   95 (261)
T ss_dssp             EEEEEECCC
T ss_pred             CCEEEECCC
Confidence            999999987

>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}

Probab=98.02  E-value=5.4e-06  Score=60.20  Aligned_cols=97  Identities=18%  Similarity=0.120  Sum_probs=63.9

Q ss_pred             CCEEEEecCCchHHHHHHHHHHHcC-CEEEEEeCCHHHHHHHHHhcCCCe-eEecCCCccHHHHHHhHCCCCccEEEeCC
Q 028523           19 GEYVFVSAASGAVGQLVGQFAKLVG-CYVVGSAGSKDKVDLLKNKFGFDE-AFNYKEEPDLDAALKRYFPEGINIYFENV   96 (208)
Q Consensus        19 g~~vli~ga~g~vG~~a~qla~~~g-~~v~~~~~s~~~~~~~~~~~g~~~-v~~~~~~~~~~~~~~~~~~~~~d~v~d~~   96 (208)
                      ..+|||+||+|++|...++.+...| ++|+++++++++.+.+. .-+... ..|..+.    +.+.+... ++|++|.+.
T Consensus        23 mk~vlVtGatG~iG~~l~~~L~~~G~~~V~~~~R~~~~~~~~~-~~~~~~~~~Dl~d~----~~~~~~~~-~~D~vv~~a   96 (236)
T 3qvo_A           23 MKNVLILGAGGQIARHVINQLADKQTIKQTLFARQPAKIHKPY-PTNSQIIMGDVLNH----AALKQAMQ-GQDIVYANL   96 (236)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHTTCTTEEEEEEESSGGGSCSSC-CTTEEEEECCTTCH----HHHHHHHT-TCSEEEEEC
T ss_pred             ccEEEEEeCCcHHHHHHHHHHHhCCCceEEEEEcChhhhcccc-cCCcEEEEecCCCH----HHHHHHhc-CCCEEEEcC
Confidence            3579999999999999999998899 79999999887654322 112211 2344332    22222222 589999988


Q ss_pred             Cchh----HHHHHHhhcc--CCEEEEEeccc
Q 028523           97 GGKM----LDAVLLNMRI--QGRITLCGMIS  121 (208)
Q Consensus        97 g~~~----~~~~~~~l~~--~G~~v~~g~~~  121 (208)
                      +...    ....++.++.  .+++|.++...
T Consensus        97 ~~~~~~~~~~~~~~~~~~~~~~~iV~iSS~~  127 (236)
T 3qvo_A           97 TGEDLDIQANSVIAAMKACDVKRLIFVLSLG  127 (236)
T ss_dssp             CSTTHHHHHHHHHHHHHHTTCCEEEEECCCC
T ss_pred             CCCchhHHHHHHHHHHHHcCCCEEEEEecce
Confidence            8532    3345555544  36899888754

>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A

Probab=98.01  E-value=2.9e-05  Score=57.36  Aligned_cols=99  Identities=15%  Similarity=0.168  Sum_probs=64.4

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCC-eeEecCCCccHHHHHHhHCC--CCccEEEe
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFD-EAFNYKEEPDLDAALKRYFP--EGINIYFE   94 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~-~v~~~~~~~~~~~~~~~~~~--~~~d~v~d   94 (208)
                      .+.++||+||+|++|...++.+...|++|+++++++++      .-... ...|..+.+.+.+.+.+...  +++|++|+
T Consensus         7 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~------~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~iD~lv~   80 (264)
T 2dtx_A            7 RDKVVIVTGASMGIGRAIAERFVDEGSKVIDLSIHDPG------EAKYDHIECDVTNPDQVKASIDHIFKEYGSISVLVN   80 (264)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSCCC------SCSSEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEecCccc------CCceEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence            46889999999999999999998899999999987654      01111 12344443233333333221  26999999


Q ss_pred             CCCc-h----------h---------------HHHHHHhhcc--CCEEEEEecccc
Q 028523           95 NVGG-K----------M---------------LDAVLLNMRI--QGRITLCGMISQ  122 (208)
Q Consensus        95 ~~g~-~----------~---------------~~~~~~~l~~--~G~~v~~g~~~~  122 (208)
                      +.|. .          .               .+.+++.|..  .|+++.+++...
T Consensus        81 ~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~  136 (264)
T 2dtx_A           81 NAGIESYGKIESMSMGEWRRIIDVNLFGYYYASKFAIPYMIRSRDPSIVNISSVQA  136 (264)
T ss_dssp             CCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEECCGGG
T ss_pred             CCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECCchh
Confidence            8872 1          0               2334455543  589999987654

>3h9u_A Adenosylhomocysteinase; NAD CO-factor complex, structural genomics, SGC stockholm, S genomics consortium, SGC, hydrolase, NAD; HET: NAD ADN PG4; 1.90A {Trypanosoma brucei} PDB: 3g1u_A* 1b3r_A* 1k0u_A* 1ky4_A* 2h5l_A* 1xwf_A* 1d4f_A* 1ky5_A* 3nj4_A* 1li4_A* 1a7a_A*

Probab=98.01  E-value=6.6e-05  Score=58.91  Aligned_cols=90  Identities=16%  Similarity=0.165  Sum_probs=69.2

Q ss_pred             CCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHHHHhHCCCCccEEEeC
Q 028523           16 PKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFEN   95 (208)
Q Consensus        16 ~~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~d~v~d~   95 (208)
                      .-.|.+|+|.| .|.+|...++.++.+|++|+++++++.+...+. ..|...+       ++.+.+.     ..|+++.+
T Consensus       208 ~L~GktVgIiG-~G~IG~~vA~~Lka~Ga~Viv~D~~p~~a~~A~-~~G~~~~-------sL~eal~-----~ADVVilt  273 (436)
T 3h9u_A          208 MIAGKTACVCG-YGDVGKGCAAALRGFGARVVVTEVDPINALQAA-MEGYQVL-------LVEDVVE-----EAHIFVTT  273 (436)
T ss_dssp             CCTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHH-HTTCEEC-------CHHHHTT-----TCSEEEEC
T ss_pred             cccCCEEEEEe-eCHHHHHHHHHHHHCCCEEEEECCChhhhHHHH-HhCCeec-------CHHHHHh-----hCCEEEEC
Confidence            34789999999 599999999999999999999998887766666 5665321       3444333     38999988


Q ss_pred             CCc-hhH-HHHHHhhccCCEEEEEec
Q 028523           96 VGG-KML-DAVLLNMRIQGRITLCGM  119 (208)
Q Consensus        96 ~g~-~~~-~~~~~~l~~~G~~v~~g~  119 (208)
                      .+. ..+ ...+..|+++..++.++.
T Consensus       274 ~gt~~iI~~e~l~~MK~gAIVINvgR  299 (436)
T 3h9u_A          274 TGNDDIITSEHFPRMRDDAIVCNIGH  299 (436)
T ss_dssp             SSCSCSBCTTTGGGCCTTEEEEECSS
T ss_pred             CCCcCccCHHHHhhcCCCcEEEEeCC
Confidence            874 333 367888999999988875

>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2

Probab=98.00  E-value=7.3e-05  Score=54.69  Aligned_cols=73  Identities=26%  Similarity=0.322  Sum_probs=52.6

Q ss_pred             CCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCee-EecCCCccHHHHHHhHCCCCccEEEeC
Q 028523           17 KQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEA-FNYKEEPDLDAALKRYFPEGINIYFEN   95 (208)
Q Consensus        17 ~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~v-~~~~~~~~~~~~~~~~~~~~~d~v~d~   95 (208)
                      -++.++||+||+|++|...++.+...|++|++++++++.   ++ +++.... .|. .. +....+....  ++|++|++
T Consensus        17 ~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~---~~-~~~~~~~~~D~-~~-~~~~~~~~~~--~iD~lv~~   88 (249)
T 1o5i_A           17 IRDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEEL---LK-RSGHRYVVCDL-RK-DLDLLFEKVK--EVDILVLN   88 (249)
T ss_dssp             CTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHH---HH-HTCSEEEECCT-TT-CHHHHHHHSC--CCSEEEEC
T ss_pred             cCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHH---HH-hhCCeEEEeeH-HH-HHHHHHHHhc--CCCEEEEC
Confidence            468899999999999999999888899999999988743   33 4542222 233 22 4444444332  69999999


Q ss_pred             CC
Q 028523           96 VG   97 (208)
Q Consensus        96 ~g   97 (208)
                      .|
T Consensus        89 Ag   90 (249)
T 1o5i_A           89 AG   90 (249)
T ss_dssp             CC
T ss_pred             CC
Confidence            87

>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*

Probab=98.00  E-value=2.2e-05  Score=58.48  Aligned_cols=81  Identities=9%  Similarity=0.151  Sum_probs=55.5

Q ss_pred             CCCCEEEEecCC--chHHHHHHHHHHHcCCEEEEEeCCH--HHHHHHHHhcCCCe--eEecCCCccHHHHHHhHC--CCC
Q 028523           17 KQGEYVFVSAAS--GAVGQLVGQFAKLVGCYVVGSAGSK--DKVDLLKNKFGFDE--AFNYKEEPDLDAALKRYF--PEG   88 (208)
Q Consensus        17 ~~g~~vli~ga~--g~vG~~a~qla~~~g~~v~~~~~s~--~~~~~~~~~~g~~~--v~~~~~~~~~~~~~~~~~--~~~   88 (208)
                      -++.++||+||+  +|+|...++.+...|++|++++++.  +..+.+.++.+...  ..|..+.+++.+.+.+..  -++
T Consensus        24 l~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~  103 (280)
T 3nrc_A           24 LAGKKILITGLLSNKSIAYGIAKAMHREGAELAFTYVGQFKDRVEKLCAEFNPAAVLPCDVISDQEIKDLFVELGKVWDG  103 (280)
T ss_dssp             TTTCEEEECCCCSTTCHHHHHHHHHHHTTCEEEEEECTTCHHHHHHHHGGGCCSEEEECCTTCHHHHHHHHHHHHHHCSS
T ss_pred             cCCCEEEEECCCCCCCHHHHHHHHHHHcCCEEEEeeCchHHHHHHHHHHhcCCceEEEeecCCHHHHHHHHHHHHHHcCC
Confidence            357899999988  6699999998888999999999887  55566653444323  234444323333333322  136


Q ss_pred             ccEEEeCCC
Q 028523           89 INIYFENVG   97 (208)
Q Consensus        89 ~d~v~d~~g   97 (208)
                      +|++|++.|
T Consensus       104 id~li~nAg  112 (280)
T 3nrc_A          104 LDAIVHSIA  112 (280)
T ss_dssp             CCEEEECCC
T ss_pred             CCEEEECCc
Confidence            999999987

>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus}

Probab=98.00  E-value=2.4e-05  Score=58.44  Aligned_cols=80  Identities=11%  Similarity=0.165  Sum_probs=53.7

Q ss_pred             CCCEEEEecCC--chHHHHHHHHHHHcCCEEEEEeCCHH---HHHHHHHhcCCCe--eEecCCCccHHHHHHhHC--CCC
Q 028523           18 QGEYVFVSAAS--GAVGQLVGQFAKLVGCYVVGSAGSKD---KVDLLKNKFGFDE--AFNYKEEPDLDAALKRYF--PEG   88 (208)
Q Consensus        18 ~g~~vli~ga~--g~vG~~a~qla~~~g~~v~~~~~s~~---~~~~~~~~~g~~~--v~~~~~~~~~~~~~~~~~--~~~   88 (208)
                      .|.++||+||+  |++|...++.+...|++|++++++++   ..+.+.++.+...  ..|..+.+.+.+.+.+..  -++
T Consensus        20 ~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~   99 (285)
T 2p91_A           20 EGKRALITGVANERSIAYGIAKSFHREGAQLAFTYATPKLEKRVREIAKGFGSDLVVKCDVSLDEDIKNLKKFLEENWGS   99 (285)
T ss_dssp             TTCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHTSC
T ss_pred             CCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            57899999998  89999999988888999999998875   3333432344322  234444323333333321  136


Q ss_pred             ccEEEeCCC
Q 028523           89 INIYFENVG   97 (208)
Q Consensus        89 ~d~v~d~~g   97 (208)
                      +|++|++.|
T Consensus       100 iD~lv~~Ag  108 (285)
T 2p91_A          100 LDIIVHSIA  108 (285)
T ss_dssp             CCEEEECCC
T ss_pred             CCEEEECCC
Confidence            999999987

>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2

Probab=97.98  E-value=2e-05  Score=58.27  Aligned_cols=107  Identities=10%  Similarity=0.126  Sum_probs=69.8

Q ss_pred             CCCCCEEEEecCC--chHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH---HhcCCCe--eEecCCCccHHHHHHhHC--C
Q 028523           16 PKQGEYVFVSAAS--GAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLK---NKFGFDE--AFNYKEEPDLDAALKRYF--P   86 (208)
Q Consensus        16 ~~~g~~vli~ga~--g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~---~~~g~~~--v~~~~~~~~~~~~~~~~~--~   86 (208)
                      ..+++++||+||+  +++|...++.+...|++|++++++++..+.++   ++.+...  ..|..+.+++...+.+..  -
T Consensus        11 ~~~~k~vlITGa~~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   90 (271)
T 3ek2_A           11 FLDGKRILLTGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKDRITEFAAEFGSELVFPCDVADDAQIDALFASLKTHW   90 (271)
T ss_dssp             TTTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHC
T ss_pred             ccCCCEEEEeCCCCCCcHHHHHHHHHHHcCCCEEEEecchhhHHHHHHHHHHcCCcEEEECCCCCHHHHHHHHHHHHHHc
Confidence            4578999999998  99999999988889999999998855433333   2444322  334444323333333322  1


Q ss_pred             CCccEEEeCCCc-h-----------h-------------------HHHHHHhhccCCEEEEEecccc
Q 028523           87 EGINIYFENVGG-K-----------M-------------------LDAVLLNMRIQGRITLCGMISQ  122 (208)
Q Consensus        87 ~~~d~v~d~~g~-~-----------~-------------------~~~~~~~l~~~G~~v~~g~~~~  122 (208)
                      +++|++|++.|. .           .                   .+.+++.|.++|+++.++....
T Consensus        91 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~~  157 (271)
T 3ek2_A           91 DSLDGLVHSIGFAPREAIAGDFLDGLTRENFRIAHDISAYSFPALAKAALPMLSDDASLLTLSYLGA  157 (271)
T ss_dssp             SCEEEEEECCCCCCGGGGSSCTTTTCCHHHHHHHHHHHTTHHHHHHHHHGGGEEEEEEEEEEECGGG
T ss_pred             CCCCEEEECCccCccccccCccccccCHHHHHHHHhhhHHHHHHHHHHHHHHhccCceEEEEecccc
Confidence            369999998872 1           0                   1234445566889999887654

>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=97.98  E-value=2.8e-05  Score=56.41  Aligned_cols=99  Identities=18%  Similarity=0.159  Sum_probs=63.3

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCee--EecCCCccHHH---HHHhHCC-CCccE
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEA--FNYKEEPDLDA---ALKRYFP-EGINI   91 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~v--~~~~~~~~~~~---~~~~~~~-~~~d~   91 (208)
                      ++.++||+||+|++|...++.+...|++|+++++++++.+      +....  .|..+.+++.+   .+.+..+ +++|+
T Consensus         2 ~~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~------~~~~~~~~D~~~~~~~~~~~~~~~~~~~~g~id~   75 (236)
T 1ooe_A            2 SSGKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQA------DSNILVDGNKNWTEQEQSILEQTASSLQGSQVDG   75 (236)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCCTTS------SEEEECCTTSCHHHHHHHHHHHHHHHHTTCCEEE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEecCccccc------cccEEEeCCCCCHHHHHHHHHHHHHHhCCCCCCE
Confidence            3578999999999999999999889999999998865422      00111  12222212222   2222222 47999


Q ss_pred             EEeCCCc--------hh-------------------HHHHHHhhccCCEEEEEecccc
Q 028523           92 YFENVGG--------KM-------------------LDAVLLNMRIQGRITLCGMISQ  122 (208)
Q Consensus        92 v~d~~g~--------~~-------------------~~~~~~~l~~~G~~v~~g~~~~  122 (208)
                      +|++.|.        +.                   .+.+++.|.++|+++.+++...
T Consensus        76 lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~  133 (236)
T 1ooe_A           76 VFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKPGGLLQLTGAAAA  133 (236)
T ss_dssp             EEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGG
T ss_pred             EEECCcccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEECchhh
Confidence            9999872        10                   2334455556789999887654

>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}

Probab=97.98  E-value=3e-05  Score=58.92  Aligned_cols=80  Identities=19%  Similarity=0.235  Sum_probs=53.6

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCC------------HHHHHHHHH---hcCCCe---eEecCCCccHHH
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGS------------KDKVDLLKN---KFGFDE---AFNYKEEPDLDA   79 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s------------~~~~~~~~~---~~g~~~---v~~~~~~~~~~~   79 (208)
                      .|.++||+||++++|.+.++.+...|++|++++++            .++.+.+.+   ..|...   ..|..+.+++.+
T Consensus        45 ~gk~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~  124 (317)
T 3oec_A           45 QGKVAFITGAARGQGRTHAVRLAQDGADIVAIDLCRQQPNLDYAQGSPEELKETVRLVEEQGRRIIARQADVRDLASLQA  124 (317)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECCCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCeEEEEecccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHH
Confidence            57899999999999999999999999999999865            444433321   334332   234444323333


Q ss_pred             HHHhHCC--CCccEEEeCCC
Q 028523           80 ALKRYFP--EGINIYFENVG   97 (208)
Q Consensus        80 ~~~~~~~--~~~d~v~d~~g   97 (208)
                      .+.+...  +++|++|++.|
T Consensus       125 ~~~~~~~~~g~iD~lVnnAg  144 (317)
T 3oec_A          125 VVDEALAEFGHIDILVSNVG  144 (317)
T ss_dssp             HHHHHHHHHSCCCEEEECCC
T ss_pred             HHHHHHHHcCCCCEEEECCC
Confidence            3333322  26999999987

>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A*

Probab=97.98  E-value=3.6e-05  Score=55.98  Aligned_cols=100  Identities=15%  Similarity=0.164  Sum_probs=63.9

Q ss_pred             CCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCe--eEecCCCccHHHHHH---hHCC-CCcc
Q 028523           17 KQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDE--AFNYKEEPDLDAALK---RYFP-EGIN   90 (208)
Q Consensus        17 ~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~--v~~~~~~~~~~~~~~---~~~~-~~~d   90 (208)
                      ..+.++||+||+|++|...++.+...|++|+++++++++.+      +...  ..|..+.+.+.+.+.   +..+ +++|
T Consensus         5 ~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~------~~~~~~~~D~~~~~~v~~~~~~~~~~~~~g~iD   78 (241)
T 1dhr_A            5 GEARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEEA------SASVIVKMTDSFTEQADQVTAEVGKLLGDQKVD   78 (241)
T ss_dssp             -CCCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSCCTTS------SEEEECCCCSCHHHHHHHHHHHHHHHHTTCCEE
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCChhhcc------CCcEEEEcCCCCHHHHHHHHHHHHHHhCCCCCC
Confidence            45789999999999999999999889999999998865422      1011  123332212222222   2222 4799


Q ss_pred             EEEeCCCc--------h----h---------------HHHHHHhhccCCEEEEEecccc
Q 028523           91 IYFENVGG--------K----M---------------LDAVLLNMRIQGRITLCGMISQ  122 (208)
Q Consensus        91 ~v~d~~g~--------~----~---------------~~~~~~~l~~~G~~v~~g~~~~  122 (208)
                      ++|++.|.        +    .               .+.+++.|.++|+++.+++...
T Consensus        79 ~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~g~iv~isS~~~  137 (241)
T 1dhr_A           79 AILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKEGGLLTLAGAKAA  137 (241)
T ss_dssp             EEEECCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGG
T ss_pred             EEEEcccccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHhhccCCEEEEECCHHH
Confidence            99999872        1    0               1234445556789999987654

>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV}

Probab=97.98  E-value=2.9e-05  Score=57.71  Aligned_cols=80  Identities=24%  Similarity=0.280  Sum_probs=53.2

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHH-------HHHHHH---hcCCCe---eEecCCCccHHHHHHhH
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDK-------VDLLKN---KFGFDE---AFNYKEEPDLDAALKRY   84 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~-------~~~~~~---~~g~~~---v~~~~~~~~~~~~~~~~   84 (208)
                      +|+++||+||++++|.+.++.+...|++|++++++.++       .+.+.+   ..+...   ..|..+..++.+.+.+.
T Consensus         5 ~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~   84 (274)
T 3e03_A            5 SGKTLFITGASRGIGLAIALRAARDGANVAIAAKSAVANPKLPGTIHSAAAAVNAAGGQGLALKCDIREEDQVRAAVAAT   84 (274)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCSCCTTSCCCHHHHHHHHHHHTSEEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeccchhhhhhHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHH
Confidence            57899999999999999999888899999999988643       222211   334322   23444432333333333


Q ss_pred             CC--CCccEEEeCCC
Q 028523           85 FP--EGINIYFENVG   97 (208)
Q Consensus        85 ~~--~~~d~v~d~~g   97 (208)
                      ..  +++|+++++.|
T Consensus        85 ~~~~g~iD~lvnnAG   99 (274)
T 3e03_A           85 VDTFGGIDILVNNAS   99 (274)
T ss_dssp             HHHHSCCCEEEECCC
T ss_pred             HHHcCCCCEEEECCC
Confidence            22  36999999987

>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}

Probab=97.98  E-value=0.00018  Score=51.64  Aligned_cols=100  Identities=12%  Similarity=0.111  Sum_probs=69.3

Q ss_pred             cCCCCCCEEEEecCCchHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHH---hcCCC-eeEecCCCccHHHHHHhHCCC
Q 028523           14 CSPKQGEYVFVSAASGAVGQLVGQFAKLV--GCYVVGSAGSKDKVDLLKN---KFGFD-EAFNYKEEPDLDAALKRYFPE   87 (208)
Q Consensus        14 ~~~~~g~~vli~ga~g~vG~~a~qla~~~--g~~v~~~~~s~~~~~~~~~---~~g~~-~v~~~~~~~~~~~~~~~~~~~   87 (208)
                      .+.+++.+||=.|  .+.|..++.+++.+  +.+|++++.+++..+.+++   ..|.. .-+..... +..+.+.....+
T Consensus        52 ~~~~~~~~vLdiG--~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~~i~~~~g-da~~~l~~~~~~  128 (221)
T 3dr5_A           52 TNGNGSTGAIAIT--PAAGLVGLYILNGLADNTTLTCIDPESEHQRQAKALFREAGYSPSRVRFLLS-RPLDVMSRLAND  128 (221)
T ss_dssp             SCCTTCCEEEEES--TTHHHHHHHHHHHSCTTSEEEEECSCHHHHHHHHHHHHHTTCCGGGEEEECS-CHHHHGGGSCTT
T ss_pred             hCCCCCCCEEEEc--CCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCcCcEEEEEc-CHHHHHHHhcCC
Confidence            3444556999887  46799999999986  5799999999998777764   33543 22233333 455444443345


Q ss_pred             CccEEEeCCCc----hhHHHHHHhhccCCEEEE
Q 028523           88 GINIYFENVGG----KMLDAVLLNMRIQGRITL  116 (208)
Q Consensus        88 ~~d~v~d~~g~----~~~~~~~~~l~~~G~~v~  116 (208)
                      .||+||-....    ..+..+++.|+|||.++.
T Consensus       129 ~fD~V~~d~~~~~~~~~l~~~~~~LkpGG~lv~  161 (221)
T 3dr5_A          129 SYQLVFGQVSPMDLKALVDAAWPLLRRGGALVL  161 (221)
T ss_dssp             CEEEEEECCCTTTHHHHHHHHHHHEEEEEEEEE
T ss_pred             CcCeEEEcCcHHHHHHHHHHHHHHcCCCcEEEE
Confidence            79999865442    257888999999999886

>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A*

Probab=97.97  E-value=7.8e-06  Score=60.02  Aligned_cols=95  Identities=15%  Similarity=0.195  Sum_probs=60.4

Q ss_pred             CEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHHHHhHCCCCccEEEeCCCch
Q 028523           20 EYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVGGK   99 (208)
Q Consensus        20 ~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~d~v~d~~g~~   99 (208)
                      .++||+||+|++|...++.+...|++|+++++++++.+    .   ....|..+.+.+.+.+.+. .+++|++|++.|..
T Consensus         2 k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~----~---~~~~Dl~~~~~v~~~~~~~-~~~id~lv~~Ag~~   73 (257)
T 1fjh_A            2 SIIVISGCATGIGAATRKVLEAAGHQIVGIDIRDAEVI----A---DLSTAEGRKQAIADVLAKC-SKGMDGLVLCAGLG   73 (257)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSEE----C---CTTSHHHHHHHHHHHHTTC-TTCCSEEEECCCCC
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCchhhc----c---ccccCCCCHHHHHHHHHHh-CCCCCEEEECCCCC
Confidence            36899999999999999998889999999998765321    0   0111211110122222222 24689999998732


Q ss_pred             h-------------------HHHHHHhhcc--CCEEEEEecccc
Q 028523          100 M-------------------LDAVLLNMRI--QGRITLCGMISQ  122 (208)
Q Consensus       100 ~-------------------~~~~~~~l~~--~G~~v~~g~~~~  122 (208)
                      .                   .+.+++.|..  .|+++.+++...
T Consensus        74 ~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~  117 (257)
T 1fjh_A           74 PQTKVLGNVVSVNYFGATELMDAFLPALKKGHQPAAVVISSVAS  117 (257)
T ss_dssp             TTCSSHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGG
T ss_pred             CCcccHHHHHHHhhHHHHHHHHHHHHHHhhcCCcEEEEECChhh
Confidence            1                   3345555544  389999987654

>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A*

Probab=97.96  E-value=3.5e-05  Score=56.46  Aligned_cols=105  Identities=16%  Similarity=0.120  Sum_probs=66.3

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCE-EEEEeCCH--HHHHHHHHhc-CCC-e--eEecCCC-ccHHHHHHhHCC--C
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGCY-VVGSAGSK--DKVDLLKNKF-GFD-E--AFNYKEE-PDLDAALKRYFP--E   87 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~~-v~~~~~s~--~~~~~~~~~~-g~~-~--v~~~~~~-~~~~~~~~~~~~--~   87 (208)
                      ++.+++|+||+|++|...++.+...|++ |+++++++  +..+.+.+.. +.. .  ..|..+. +.+.+.+.+...  +
T Consensus         4 ~~k~vlVtGas~gIG~~~a~~l~~~G~~~v~~~~r~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g   83 (254)
T 1sby_A            4 TNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAINPKVNITFHTYDVTVPVAESKKLLKKIFDQLK   83 (254)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSCCHHHHHHHHHHCTTSEEEEEECCTTSCHHHHHHHHHHHHHHHS
T ss_pred             CCcEEEEECCCChHHHHHHHHHHHCCCcEEEEEecCchHHHHHHHHHhCCCceEEEEEEecCCChHHHHHHHHHHHHhcC
Confidence            4678999999999999999999889995 99988875  3344444232 221 1  2344432 233333333221  2


Q ss_pred             CccEEEeCCCc---hh---------------HHHHHHhhcc-----CCEEEEEecccc
Q 028523           88 GINIYFENVGG---KM---------------LDAVLLNMRI-----QGRITLCGMISQ  122 (208)
Q Consensus        88 ~~d~v~d~~g~---~~---------------~~~~~~~l~~-----~G~~v~~g~~~~  122 (208)
                      ++|++|++.|.   +.               .+.+++.+..     +|+++.+++...
T Consensus        84 ~id~lv~~Ag~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~g~iv~isS~~~  141 (254)
T 1sby_A           84 TVDILINGAGILDDHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSVTG  141 (254)
T ss_dssp             CCCEEEECCCCCCTTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGG
T ss_pred             CCCEEEECCccCCHHHHhhhheeeehhHHHHHHHHHHHHHHhcCCCCCEEEEECchhh
Confidence            69999999872   11               2334444433     588999987654

>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}

Probab=97.96  E-value=1.4e-05  Score=59.60  Aligned_cols=95  Identities=12%  Similarity=0.102  Sum_probs=63.4

Q ss_pred             EEEEecCCchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHhcCCCe-eEecCCCccHHHHHHhHCCCCccEEEeCCCc
Q 028523           21 YVFVSAASGAVGQLVGQFAKLV-GCYVVGSAGSKDKVDLLKNKFGFDE-AFNYKEEPDLDAALKRYFPEGINIYFENVGG   98 (208)
Q Consensus        21 ~vli~ga~g~vG~~a~qla~~~-g~~v~~~~~s~~~~~~~~~~~g~~~-v~~~~~~~~~~~~~~~~~~~~~d~v~d~~g~   98 (208)
                      +|||+||+|.+|...++.+... |.+|+++++++++...+. ..+... ..|..+.    +.+.+... ++|.||.+.+.
T Consensus         2 ~ilVtGatG~iG~~l~~~L~~~~g~~V~~~~R~~~~~~~~~-~~~v~~~~~D~~d~----~~l~~~~~-~~d~vi~~a~~   75 (289)
T 3e48_A            2 NIMLTGATGHLGTHITNQAIANHIDHFHIGVRNVEKVPDDW-RGKVSVRQLDYFNQ----ESMVEAFK-GMDTVVFIPSI   75 (289)
T ss_dssp             CEEEETTTSHHHHHHHHHHHHTTCTTEEEEESSGGGSCGGG-BTTBEEEECCTTCH----HHHHHHTT-TCSEEEECCCC
T ss_pred             EEEEEcCCchHHHHHHHHHhhCCCCcEEEEECCHHHHHHhh-hCCCEEEEcCCCCH----HHHHHHHh-CCCEEEEeCCC
Confidence            4899999999999999888777 899999999987755443 334322 2344432    23333333 59999999873


Q ss_pred             -h-------hHHHHHHhhccC--CEEEEEeccc
Q 028523           99 -K-------MLDAVLLNMRIQ--GRITLCGMIS  121 (208)
Q Consensus        99 -~-------~~~~~~~~l~~~--G~~v~~g~~~  121 (208)
                       .       .....++.++..  ++++.++...
T Consensus        76 ~~~~~~~~~~~~~l~~aa~~~gv~~iv~~Ss~~  108 (289)
T 3e48_A           76 IHPSFKRIPEVENLVYAAKQSGVAHIIFIGYYA  108 (289)
T ss_dssp             CCSHHHHHHHHHHHHHHHHHTTCCEEEEEEESC
T ss_pred             CccchhhHHHHHHHHHHHHHcCCCEEEEEcccC
Confidence             1       223445555443  5888888754

>3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides}

Probab=97.96  E-value=4.6e-06  Score=61.82  Aligned_cols=100  Identities=17%  Similarity=0.144  Sum_probs=63.5

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHHHHhHCC--CCccEEEeC
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFP--EGINIYFEN   95 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~--~~~d~v~d~   95 (208)
                      .|+++||+||++++|.+.++.+...|++|++++++.+..+... .+    ..|..+.......+.+...  +++|+++++
T Consensus        27 ~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~-~~----~~Dv~~~~~~~~~~~~~~~~~g~iD~lvnn  101 (266)
T 3uxy_A           27 EGKVALVTGAAGGIGGAVVTALRAAGARVAVADRAVAGIAADL-HL----PGDLREAAYADGLPGAVAAGLGRLDIVVNN  101 (266)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEECSSCCTTSCCSE-EC----CCCTTSHHHHHHHHHHHHHHHSCCCEEEEC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHhhh-cc----CcCCCCHHHHHHHHHHHHHhcCCCCEEEEC
Confidence            5789999999999999999998889999999998765432111 11    1233332122222222211  269999999


Q ss_pred             CCc-h----------h---------------HHHHHHhhcc--CCEEEEEecccc
Q 028523           96 VGG-K----------M---------------LDAVLLNMRI--QGRITLCGMISQ  122 (208)
Q Consensus        96 ~g~-~----------~---------------~~~~~~~l~~--~G~~v~~g~~~~  122 (208)
                      .|. .          .               .+.+++.|..  +|+++.+++...
T Consensus       102 Ag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~  156 (266)
T 3uxy_A          102 AGVISRGRITETTDADWSLSLGVNVEAPFRICRAAIPLMAAAGGGAIVNVASCWG  156 (266)
T ss_dssp             CCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBT
T ss_pred             CCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECCHHh
Confidence            872 1          0               2334444443  789999987654

>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*

Probab=97.96  E-value=3.5e-05  Score=56.24  Aligned_cols=80  Identities=20%  Similarity=0.295  Sum_probs=52.7

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeC-CHHHHHHHHH---hcCCCe---eEecCCCccHHHHHHhHCC--CC
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAG-SKDKVDLLKN---KFGFDE---AFNYKEEPDLDAALKRYFP--EG   88 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~-s~~~~~~~~~---~~g~~~---v~~~~~~~~~~~~~~~~~~--~~   88 (208)
                      .+.++||+||+|++|.+.++.+...|++|+++++ +.++.+.+.+   ..|...   ..|..+.+++.+.+.+...  ++
T Consensus         3 ~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~   82 (246)
T 3osu_A            3 MTKSALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAKGVDSFAIQANVADADEVKAMIKEVVSQFGS   82 (246)
T ss_dssp             CSCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTSCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            4678999999999999999999999999998876 4454444332   334332   2344443233333333222  26


Q ss_pred             ccEEEeCCC
Q 028523           89 INIYFENVG   97 (208)
Q Consensus        89 ~d~v~d~~g   97 (208)
                      +|+++++.|
T Consensus        83 id~lv~nAg   91 (246)
T 3osu_A           83 LDVLVNNAG   91 (246)
T ss_dssp             CCEEEECCC
T ss_pred             CCEEEECCC
Confidence            999999987

>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}

Probab=97.95  E-value=5.9e-05  Score=53.91  Aligned_cols=95  Identities=13%  Similarity=0.167  Sum_probs=61.7

Q ss_pred             EEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHHHHhHCCCCccEEEeCCCchh
Q 028523           21 YVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVGGKM  100 (208)
Q Consensus        21 ~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~  100 (208)
                      +|||+||+|.+|...++.+...|.+|+++++++++.+.+    ....++..+-. +..+.+.+... ++|+||++.|...
T Consensus         2 ~ilItGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~----~~~~~~~~D~~-d~~~~~~~~~~-~~d~vi~~ag~~~   75 (219)
T 3dqp_A            2 KIFIVGSTGRVGKSLLKSLSTTDYQIYAGARKVEQVPQY----NNVKAVHFDVD-WTPEEMAKQLH-GMDAIINVSGSGG   75 (219)
T ss_dssp             EEEEESTTSHHHHHHHHHHTTSSCEEEEEESSGGGSCCC----TTEEEEECCTT-SCHHHHHTTTT-TCSEEEECCCCTT
T ss_pred             eEEEECCCCHHHHHHHHHHHHCCCEEEEEECCccchhhc----CCceEEEeccc-CCHHHHHHHHc-CCCEEEECCcCCC
Confidence            589999999999999999988899999999998654322    11122222111 21234444333 5999999998321


Q ss_pred             ----------HHHHHHhhcc-C-CEEEEEeccc
Q 028523          101 ----------LDAVLLNMRI-Q-GRITLCGMIS  121 (208)
Q Consensus       101 ----------~~~~~~~l~~-~-G~~v~~g~~~  121 (208)
                                ....++.+.. + ++++.++...
T Consensus        76 ~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~  108 (219)
T 3dqp_A           76 KSLLKVDLYGAVKLMQAAEKAEVKRFILLSTIF  108 (219)
T ss_dssp             SSCCCCCCHHHHHHHHHHHHTTCCEEEEECCTT
T ss_pred             CCcEeEeHHHHHHHHHHHHHhCCCEEEEECccc
Confidence                      2334444444 3 5899888754

>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=97.95  E-value=2.2e-05  Score=57.15  Aligned_cols=79  Identities=18%  Similarity=0.212  Sum_probs=55.2

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcC--CEEEEEeCCHHHHHHHHHhc-CCC-e--eEecCCCccHHHHHHhH---CCC-
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVG--CYVVGSAGSKDKVDLLKNKF-GFD-E--AFNYKEEPDLDAALKRY---FPE-   87 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g--~~v~~~~~s~~~~~~~~~~~-g~~-~--v~~~~~~~~~~~~~~~~---~~~-   87 (208)
                      ++.+++|+||+|++|...++.+...|  ++|++++++.++.+.+. ++ +.. .  ..|..+...+.+.+.+.   .+. 
T Consensus         2 ~~k~vlItGasggiG~~la~~l~~~g~~~~V~~~~r~~~~~~~l~-~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~   80 (250)
T 1yo6_A            2 SPGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELK-SIKDSRVHVLPLTVTCDKSLDTFVSKVGEIVGSD   80 (250)
T ss_dssp             CCSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHHHH-TCCCTTEEEEECCTTCHHHHHHHHHHHHHHHGGG
T ss_pred             CCCEEEEecCCchHHHHHHHHHHhcCCCcEEEEEecCHHHHHHHH-hccCCceEEEEeecCCHHHHHHHHHHHHHhcCCC
Confidence            36789999999999999999888899  99999999988877776 54 222 1  23444331233333322   221 


Q ss_pred             CccEEEeCCC
Q 028523           88 GINIYFENVG   97 (208)
Q Consensus        88 ~~d~v~d~~g   97 (208)
                      ++|++|++.|
T Consensus        81 ~id~li~~Ag   90 (250)
T 1yo6_A           81 GLSLLINNAG   90 (250)
T ss_dssp             CCCEEEECCC
T ss_pred             CCcEEEECCc
Confidence            5999999887

>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0

Probab=97.95  E-value=2.3e-05  Score=58.25  Aligned_cols=79  Identities=11%  Similarity=0.202  Sum_probs=51.3

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhc---CCCe---eEecCCCccHHHHHHhHC-CCCcc
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKF---GFDE---AFNYKEEPDLDAALKRYF-PEGIN   90 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~---g~~~---v~~~~~~~~~~~~~~~~~-~~~~d   90 (208)
                      .|.++||+||++++|.+.++.+...|++|+++++++...+.+. ++   +...   ..|..+.++..+...... .+++|
T Consensus        30 ~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~g~iD  108 (273)
T 3uf0_A           30 AGRTAVVTGAGSGIGRAIAHGYARAGAHVLAWGRTDGVKEVAD-EIADGGGSAEAVVADLADLEGAANVAEELAATRRVD  108 (273)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTHHHHHHH-HHHTTTCEEEEEECCTTCHHHHHHHHHHHHHHSCCC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCHHHHHHHHH-HHHhcCCcEEEEEecCCCHHHHHHHHHHHHhcCCCc
Confidence            5789999999999999999998899999999996654333333 33   3221   234444312222211111 13799


Q ss_pred             EEEeCCC
Q 028523           91 IYFENVG   97 (208)
Q Consensus        91 ~v~d~~g   97 (208)
                      ++|++.|
T Consensus       109 ~lv~nAg  115 (273)
T 3uf0_A          109 VLVNNAG  115 (273)
T ss_dssp             EEEECCC
T ss_pred             EEEECCC
Confidence            9999987

>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2

Probab=97.94  E-value=2e-05  Score=58.07  Aligned_cols=80  Identities=13%  Similarity=0.138  Sum_probs=52.5

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHH----HHHhcCCCe---eEecCCCccHHHHHHhHC--CCC
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDL----LKNKFGFDE---AFNYKEEPDLDAALKRYF--PEG   88 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~----~~~~~g~~~---v~~~~~~~~~~~~~~~~~--~~~   88 (208)
                      .+.++||+||+|++|...++.+...|++|++++++.++...    +.++.+...   ..|..+.+.+...+.+..  -++
T Consensus        13 ~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   92 (265)
T 1h5q_A           13 VNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSNTDIVTKTIQQIDADLGP   92 (265)
T ss_dssp             TTEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHHHSCS
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCcchhhHHHHHHHHHhcCCeeEEEEeeCCCHHHHHHHHHHHHHhcCC
Confidence            46789999999999999999888899999999986544322    221234322   234444323333333322  136


Q ss_pred             ccEEEeCCC
Q 028523           89 INIYFENVG   97 (208)
Q Consensus        89 ~d~v~d~~g   97 (208)
                      +|++|++.|
T Consensus        93 id~li~~Ag  101 (265)
T 1h5q_A           93 ISGLIANAG  101 (265)
T ss_dssp             EEEEEECCC
T ss_pred             CCEEEECCC
Confidence            999999887

>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}

Probab=97.94  E-value=3.3e-05  Score=57.27  Aligned_cols=82  Identities=18%  Similarity=0.186  Sum_probs=53.9

Q ss_pred             CCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEE-eCCHHHHHHHHHh---cCCCe---eEecCCCccHHHHHHhHCC--
Q 028523           16 PKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGS-AGSKDKVDLLKNK---FGFDE---AFNYKEEPDLDAALKRYFP--   86 (208)
Q Consensus        16 ~~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~-~~s~~~~~~~~~~---~g~~~---v~~~~~~~~~~~~~~~~~~--   86 (208)
                      ...+.++||+||+|++|.+.++.+...|++|+++ .++.+..+.+.++   .+...   ..|..+.+++.+.+.+...  
T Consensus        23 m~~~k~vlITGas~gIG~a~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  102 (272)
T 4e3z_A           23 MSDTPVVLVTGGSRGIGAAVCRLAARQGWRVGVNYAANREAADAVVAAITESGGEAVAIPGDVGNAADIAAMFSAVDRQF  102 (272)
T ss_dssp             -CCSCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             ccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHhC
Confidence            4567899999999999999999999999999776 6666655544322   33321   2344443233333333221  


Q ss_pred             CCccEEEeCCC
Q 028523           87 EGINIYFENVG   97 (208)
Q Consensus        87 ~~~d~v~d~~g   97 (208)
                      +++|++|++.|
T Consensus       103 g~id~li~nAg  113 (272)
T 4e3z_A          103 GRLDGLVNNAG  113 (272)
T ss_dssp             SCCCEEEECCC
T ss_pred             CCCCEEEECCC
Confidence            26999999887

>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium}

Probab=97.92  E-value=1.1e-05  Score=59.88  Aligned_cols=78  Identities=18%  Similarity=0.173  Sum_probs=52.4

Q ss_pred             CCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCC-eeEecCCCccHHHHHHhHCC--CCccE
Q 028523           15 SPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFD-EAFNYKEEPDLDAALKRYFP--EGINI   91 (208)
Q Consensus        15 ~~~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~-~v~~~~~~~~~~~~~~~~~~--~~~d~   91 (208)
                      .-.+|+++||+||++++|.+.++.+...|++|++++++++...    . ... ...|..+.+++.+.+.+...  +++|+
T Consensus        10 ~~~~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~----~-~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~   84 (269)
T 3vtz_A           10 EEFTDKVAIVTGGSSGIGLAVVDALVRYGAKVVSVSLDEKSDV----N-VSDHFKIDVTNEEEVKEAVEKTTKKYGRIDI   84 (269)
T ss_dssp             CTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCC--CT----T-SSEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             cCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCchhcc----C-ceeEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence            3457899999999999999999998889999999998765431    1 111 12344443233333333222  36999


Q ss_pred             EEeCCC
Q 028523           92 YFENVG   97 (208)
Q Consensus        92 v~d~~g   97 (208)
                      +|++.|
T Consensus        85 lv~nAg   90 (269)
T 3vtz_A           85 LVNNAG   90 (269)
T ss_dssp             EEECCC
T ss_pred             EEECCC
Confidence            999987

>4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A*

Probab=97.92  E-value=1.1e-05  Score=59.57  Aligned_cols=99  Identities=12%  Similarity=0.180  Sum_probs=65.5

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCC--eeEecCCCccHHHHHHhHC--CCCccEEE
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFD--EAFNYKEEPDLDAALKRYF--PEGINIYF   93 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~--~v~~~~~~~~~~~~~~~~~--~~~~d~v~   93 (208)
                      +|+++||+||++++|++.++.+...|++|+++.+++++      .....  ...|..+.++....+.+..  -+++|+++
T Consensus        10 ~GK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~------~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iDilV   83 (261)
T 4h15_A           10 RGKRALITAGTKGAGAATVSLFLELGAQVLTTARARPE------GLPEELFVEADLTTKEGCAIVAEATRQRLGGVDVIV   83 (261)
T ss_dssp             TTCEEEESCCSSHHHHHHHHHHHHTTCEEEEEESSCCT------TSCTTTEEECCTTSHHHHHHHHHHHHHHTSSCSEEE
T ss_pred             CCCEEEEeccCcHHHHHHHHHHHHcCCEEEEEECCchh------CCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence            68999999999999999999999999999999987542      11111  1234444323333333222  13699999


Q ss_pred             eCCCc-h----h-----------------------HHHHHHhhcc--CCEEEEEecccc
Q 028523           94 ENVGG-K----M-----------------------LDAVLLNMRI--QGRITLCGMISQ  122 (208)
Q Consensus        94 d~~g~-~----~-----------------------~~~~~~~l~~--~G~~v~~g~~~~  122 (208)
                      ++.|. .    .                       .+.+++.|..  +|+++.+++..+
T Consensus        84 nnAG~~~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~Iv~isS~~~  142 (261)
T 4h15_A           84 HMLGGSSAAGGGFSALSDDDWYNELSLNLFAAVRLDRQLVPDMVARGSGVVVHVTSIQR  142 (261)
T ss_dssp             ECCCCCCCCSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGG
T ss_pred             ECCCCCccCCCCcccCCHHHHHHHHHHHhHHHHHHHHhhchhhhhcCCceEEEEEehhh
Confidence            98762 1    0                       2345555533  689999987654

>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium}

Probab=97.91  E-value=2.9e-05  Score=59.11  Aligned_cols=81  Identities=17%  Similarity=0.222  Sum_probs=53.0

Q ss_pred             CCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCC----------HHHHHHHHH---hcCCCee---EecCCCccHHHH
Q 028523           17 KQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGS----------KDKVDLLKN---KFGFDEA---FNYKEEPDLDAA   80 (208)
Q Consensus        17 ~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s----------~~~~~~~~~---~~g~~~v---~~~~~~~~~~~~   80 (208)
                      -.|.++||+||++++|.+.++.+...|++|++++++          .++.+.+.+   ..|....   .|..+.+++.+.
T Consensus        25 l~gk~vlVTGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~  104 (322)
T 3qlj_A           25 VDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSPASGGSAAQSVVDEITAAGGEAVADGSNVADWDQAAGL  104 (322)
T ss_dssp             TTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSSBTCTTSHHHHHHHHHHHTTCEEEEECCCTTSHHHHHHH
T ss_pred             cCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCcccccccccccHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHH
Confidence            357899999999999999999888899999999876          344333322   3343221   233333223333


Q ss_pred             HHhHCC--CCccEEEeCCC
Q 028523           81 LKRYFP--EGINIYFENVG   97 (208)
Q Consensus        81 ~~~~~~--~~~d~v~d~~g   97 (208)
                      +.+...  +++|++|++.|
T Consensus       105 ~~~~~~~~g~iD~lv~nAg  123 (322)
T 3qlj_A          105 IQTAVETFGGLDVLVNNAG  123 (322)
T ss_dssp             HHHHHHHHSCCCEEECCCC
T ss_pred             HHHHHHHcCCCCEEEECCC
Confidence            333222  26999999987

>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*

Probab=97.90  E-value=0.0001  Score=48.83  Aligned_cols=77  Identities=13%  Similarity=0.141  Sum_probs=53.5

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHHHHhHCCCCccEEEeCCC
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVG   97 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~d~v~d~~g   97 (208)
                      ++++|+|+|+ |.+|...++.+...|.+|+++++++++.+.++ +.+.. ++..+.. + .+.+.+..-+++|+++.+++
T Consensus         5 ~~~~v~I~G~-G~iG~~~a~~l~~~g~~v~~~d~~~~~~~~~~-~~~~~-~~~~d~~-~-~~~l~~~~~~~~d~vi~~~~   79 (144)
T 2hmt_A            5 KNKQFAVIGL-GRFGGSIVKELHRMGHEVLAVDINEEKVNAYA-SYATH-AVIANAT-E-ENELLSLGIRNFEYVIVAIG   79 (144)
T ss_dssp             -CCSEEEECC-SHHHHHHHHHHHHTTCCCEEEESCHHHHHTTT-TTCSE-EEECCTT-C-HHHHHTTTGGGCSEEEECCC
T ss_pred             cCCcEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HhCCE-EEEeCCC-C-HHHHHhcCCCCCCEEEECCC
Confidence            3567999997 99999999999999999999998888777665 45543 2222111 2 22333321226999999999


Q ss_pred             ch
Q 028523           98 GK   99 (208)
Q Consensus        98 ~~   99 (208)
                      .+
T Consensus        80 ~~   81 (144)
T 2hmt_A           80 AN   81 (144)
T ss_dssp             SC
T ss_pred             Cc
Confidence            53

>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A

Probab=97.90  E-value=3.2e-05  Score=57.12  Aligned_cols=80  Identities=20%  Similarity=0.280  Sum_probs=52.9

Q ss_pred             CCCEEEEecCC--chHHHHHHHHHHHcCCEEEEEeCCHHH-----HHHHHHhcCCCe---eEecCCCccHHHHHHhHC--
Q 028523           18 QGEYVFVSAAS--GAVGQLVGQFAKLVGCYVVGSAGSKDK-----VDLLKNKFGFDE---AFNYKEEPDLDAALKRYF--   85 (208)
Q Consensus        18 ~g~~vli~ga~--g~vG~~a~qla~~~g~~v~~~~~s~~~-----~~~~~~~~g~~~---v~~~~~~~~~~~~~~~~~--   85 (208)
                      +|.++||+||+  +++|...++.+...|++|++++++.++     .+.+.+..+...   ..|..+.+++.+.+.+..  
T Consensus        19 ~~k~vlITGas~~~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   98 (267)
T 3gdg_A           19 KGKVVVVTGASGPKGMGIEAARGCAEMGAAVAITYASRAQGAEENVKELEKTYGIKAKAYKCQVDSYESCEKLVKDVVAD   98 (267)
T ss_dssp             TTCEEEETTCCSSSSHHHHHHHHHHHTSCEEEECBSSSSSHHHHHHHHHHHHHCCCEECCBCCTTCHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCCCChHHHHHHHHHHCCCeEEEEeCCcchhHHHHHHHHHHhcCCceeEEecCCCCHHHHHHHHHHHHHH
Confidence            57899999999  899999998888899999999877433     233332345432   234444323333333322  


Q ss_pred             CCCccEEEeCCC
Q 028523           86 PEGINIYFENVG   97 (208)
Q Consensus        86 ~~~~d~v~d~~g   97 (208)
                      -+++|++|++.|
T Consensus        99 ~g~id~li~nAg  110 (267)
T 3gdg_A           99 FGQIDAFIANAG  110 (267)
T ss_dssp             TSCCSEEEECCC
T ss_pred             cCCCCEEEECCC
Confidence            136999999987

>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2

Probab=97.89  E-value=2.1e-05  Score=58.00  Aligned_cols=80  Identities=10%  Similarity=0.213  Sum_probs=54.5

Q ss_pred             CCCCEEEEecCCchHHHHHHHHHHHcC---CEEEEEeCCHHHHHHHHHhc---CCC-e--eEecCCCccHHHHHHhH---
Q 028523           17 KQGEYVFVSAASGAVGQLVGQFAKLVG---CYVVGSAGSKDKVDLLKNKF---GFD-E--AFNYKEEPDLDAALKRY---   84 (208)
Q Consensus        17 ~~g~~vli~ga~g~vG~~a~qla~~~g---~~v~~~~~s~~~~~~~~~~~---g~~-~--v~~~~~~~~~~~~~~~~---   84 (208)
                      .++.++||+||+|++|...++.+...|   ++|++++++.++.+.+. ++   +.. .  ..|..+.+.+.+.+.+.   
T Consensus        19 ~~~k~vlITGasggIG~~la~~L~~~G~~~~~V~~~~r~~~~~~~~~-~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   97 (267)
T 1sny_A           19 SHMNSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELE-DLAKNHSNIHILEIDLRNFDAYDKLVADIEGV   97 (267)
T ss_dssp             -CCSEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHHHH-HHHHHCTTEEEEECCTTCGGGHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCCcHHHHHHHHHHhcCCCCcEEEEEecChhhhHHHH-HhhccCCceEEEEecCCChHHHHHHHHHHHHh
Confidence            457899999999999999999888889   99999999876544333 22   322 1  23444442444433332   


Q ss_pred             CCC-CccEEEeCCC
Q 028523           85 FPE-GINIYFENVG   97 (208)
Q Consensus        85 ~~~-~~d~v~d~~g   97 (208)
                      .+. ++|++|++.|
T Consensus        98 ~g~~~id~li~~Ag  111 (267)
T 1sny_A           98 TKDQGLNVLFNNAG  111 (267)
T ss_dssp             HGGGCCSEEEECCC
T ss_pred             cCCCCccEEEECCC
Confidence            222 5999999987

>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str}

Probab=97.87  E-value=1.8e-05  Score=57.94  Aligned_cols=106  Identities=17%  Similarity=0.190  Sum_probs=64.4

Q ss_pred             CCCCEEEEecCCchHHHHHHHHHHHcCCEEEEE-eCCHHHHHHHHHh---cCCCe-e--EecCCCccHHHHHHhHC----
Q 028523           17 KQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGS-AGSKDKVDLLKNK---FGFDE-A--FNYKEEPDLDAALKRYF----   85 (208)
Q Consensus        17 ~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~-~~s~~~~~~~~~~---~g~~~-v--~~~~~~~~~~~~~~~~~----   85 (208)
                      -+++++||+||++++|.+.++.+...|++|+++ .++.++.+...++   .+... .  .|..+.......+.+..    
T Consensus         5 l~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   84 (255)
T 3icc_A            5 LKGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGGSAFSIGANLESLHGVEALYSSLDNELQ   84 (255)
T ss_dssp             TTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCSHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHH
T ss_pred             cCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHHHhcCCceEEEecCcCCHHHHHHHHHHHHHHhc
Confidence            357899999999999999999998999999886 4555544433322   23321 1  23333212222222211    


Q ss_pred             ---C-CCccEEEeCCCc-h----------h---------------HHHHHHhhccCCEEEEEecccc
Q 028523           86 ---P-EGINIYFENVGG-K----------M---------------LDAVLLNMRIQGRITLCGMISQ  122 (208)
Q Consensus        86 ---~-~~~d~v~d~~g~-~----------~---------------~~~~~~~l~~~G~~v~~g~~~~  122 (208)
                         + +++|+++++.|. .          .               .+.+++.|+++|+++.++....
T Consensus        85 ~~~~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~iv~isS~~~  151 (255)
T 3icc_A           85 NRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRDNSRIINISSAAT  151 (255)
T ss_dssp             HHHSSSCEEEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEECCGGG
T ss_pred             ccccCCcccEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHhhCCCCEEEEeCChhh
Confidence               1 259999998872 1          0               1223345556789999987654

>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*

Probab=97.87  E-value=0.00012  Score=55.36  Aligned_cols=75  Identities=15%  Similarity=0.182  Sum_probs=52.9

Q ss_pred             CCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCC---HHHHHHHHHhc----CCC-eeEecCCCccHHHHHHhHCCC
Q 028523           17 KQGEYVFVSAASGAVGQLVGQFAKLVGC-YVVGSAGS---KDKVDLLKNKF----GFD-EAFNYKEEPDLDAALKRYFPE   87 (208)
Q Consensus        17 ~~g~~vli~ga~g~vG~~a~qla~~~g~-~v~~~~~s---~~~~~~~~~~~----g~~-~v~~~~~~~~~~~~~~~~~~~   87 (208)
                      -.|.+++|+|+ |++|.+++..+...|+ +|+++.|+   .++.+.+.+++    +.. .++++.+.+++.+.+.     
T Consensus       152 l~gk~~lVlGa-GG~g~aia~~L~~~Ga~~V~i~nR~~~~~~~a~~la~~~~~~~~~~~~~~~~~~~~~l~~~l~-----  225 (315)
T 3tnl_A          152 IIGKKMTICGA-GGAATAICIQAALDGVKEISIFNRKDDFYANAEKTVEKINSKTDCKAQLFDIEDHEQLRKEIA-----  225 (315)
T ss_dssp             CTTSEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHSSCEEEEEETTCHHHHHHHHH-----
T ss_pred             ccCCEEEEECC-ChHHHHHHHHHHHCCCCEEEEEECCCchHHHHHHHHHHhhhhcCCceEEeccchHHHHHhhhc-----
Confidence            36889999996 9999999999999999 89999999   77666554343    321 3445543212333332     


Q ss_pred             CccEEEeCCC
Q 028523           88 GINIYFENVG   97 (208)
Q Consensus        88 ~~d~v~d~~g   97 (208)
                      .+|+||+|++
T Consensus       226 ~aDiIINaTp  235 (315)
T 3tnl_A          226 ESVIFTNATG  235 (315)
T ss_dssp             TCSEEEECSS
T ss_pred             CCCEEEECcc
Confidence            4899999987

>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}

Probab=97.87  E-value=0.00028  Score=46.71  Aligned_cols=75  Identities=20%  Similarity=0.220  Sum_probs=55.8

Q ss_pred             CCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeE-ecCCCccHHHHHHhHCCCCccEEEeCCC
Q 028523           19 GEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAF-NYKEEPDLDAALKRYFPEGINIYFENVG   97 (208)
Q Consensus        19 g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~v~-~~~~~~~~~~~~~~~~~~~~d~v~d~~g   97 (208)
                      ..+++|.|+ |.+|...++.+...|.+|+++++++++.+.++ +.|...+. |..+    .+.+++..-.++|+++.+++
T Consensus         6 ~~~v~I~G~-G~iG~~la~~L~~~g~~V~~id~~~~~~~~~~-~~~~~~~~gd~~~----~~~l~~~~~~~~d~vi~~~~   79 (141)
T 3llv_A            6 RYEYIVIGS-EAAGVGLVRELTAAGKKVLAVDKSKEKIELLE-DEGFDAVIADPTD----ESFYRSLDLEGVSAVLITGS   79 (141)
T ss_dssp             CCSEEEECC-SHHHHHHHHHHHHTTCCEEEEESCHHHHHHHH-HTTCEEEECCTTC----HHHHHHSCCTTCSEEEECCS
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHCCCeEEEEECCHHHHHHHH-HCCCcEEECCCCC----HHHHHhCCcccCCEEEEecC
Confidence            467999996 99999999999999999999999999988888 66654322 2222    22334332237999999999


Q ss_pred             ch
Q 028523           98 GK   99 (208)
Q Consensus        98 ~~   99 (208)
                      .+
T Consensus        80 ~~   81 (141)
T 3llv_A           80 DD   81 (141)
T ss_dssp             CH
T ss_pred             CH
Confidence            54

>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B}

Probab=97.86  E-value=3.6e-05  Score=56.95  Aligned_cols=81  Identities=17%  Similarity=0.264  Sum_probs=52.3

Q ss_pred             CCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEe-CCHHHHHHHHH---hcCCC-e--eEecCCCccHHHHHHhHCC--C
Q 028523           17 KQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSA-GSKDKVDLLKN---KFGFD-E--AFNYKEEPDLDAALKRYFP--E   87 (208)
Q Consensus        17 ~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~-~s~~~~~~~~~---~~g~~-~--v~~~~~~~~~~~~~~~~~~--~   87 (208)
                      ..+.++||+||++++|...++.+...|++|++++ ++.+..+...+   ..+.. .  ..|..+.....+.+.+...  +
T Consensus        23 ~~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g  102 (269)
T 3gk3_A           23 QAKRVAFVTGGMGGLGAAISRRLHDAGMAVAVSHSERNDHVSTWLMHERDAGRDFKAYAVDVADFESCERCAEKVLADFG  102 (269)
T ss_dssp             -CCCEEEETTTTSHHHHHHHHHHHTTTCEEEEEECSCHHHHHHHHHHHHTTTCCCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             hcCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcC
Confidence            4578899999999999999999888999999988 55554433321   22332 1  2344443233333333221  2


Q ss_pred             CccEEEeCCC
Q 028523           88 GINIYFENVG   97 (208)
Q Consensus        88 ~~d~v~d~~g   97 (208)
                      ++|++|++.|
T Consensus       103 ~id~li~nAg  112 (269)
T 3gk3_A          103 KVDVLINNAG  112 (269)
T ss_dssp             CCSEEEECCC
T ss_pred             CCCEEEECCC
Confidence            6999999987

>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*

Probab=97.85  E-value=3.8e-05  Score=54.15  Aligned_cols=96  Identities=11%  Similarity=0.072  Sum_probs=60.9

Q ss_pred             CEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCe-eEecCCCccHHHHHHhHCCCCccEEEeCCCc
Q 028523           20 EYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDE-AFNYKEEPDLDAALKRYFPEGINIYFENVGG   98 (208)
Q Consensus        20 ~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~-v~~~~~~~~~~~~~~~~~~~~~d~v~d~~g~   98 (208)
                      .+|+|+||+|.+|...++.+...|.+|+++++++++.+... .-+... ..|..+.    +.+.+... ++|++|++.+.
T Consensus         4 ~~ilVtGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~~D~~~~----~~~~~~~~-~~d~vi~~a~~   77 (206)
T 1hdo_A            4 KKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSEG-PRPAHVVVGDVLQA----ADVDKTVA-GQDAVIVLLGT   77 (206)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGGSCSSS-CCCSEEEESCTTSH----HHHHHHHT-TCSEEEECCCC
T ss_pred             CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeChhhccccc-CCceEEEEecCCCH----HHHHHHHc-CCCEEEECccC
Confidence            68999999999999999998888999999999876543221 112211 2233322    22333222 48999999883


Q ss_pred             -h----------hHHHHHHhhcc--CCEEEEEeccc
Q 028523           99 -K----------MLDAVLLNMRI--QGRITLCGMIS  121 (208)
Q Consensus        99 -~----------~~~~~~~~l~~--~G~~v~~g~~~  121 (208)
                       .          .....++.+..  -++++.++...
T Consensus        78 ~~~~~~~~~n~~~~~~~~~~~~~~~~~~~v~~Ss~~  113 (206)
T 1hdo_A           78 RNDLSPTTVMSEGARNIVAAMKAHGVDKVVACTSAF  113 (206)
T ss_dssp             TTCCSCCCHHHHHHHHHHHHHHHHTCCEEEEECCGG
T ss_pred             CCCCCccchHHHHHHHHHHHHHHhCCCeEEEEeeee
Confidence             2          12334444433  36888887654

>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A*

Probab=97.83  E-value=0.00014  Score=55.74  Aligned_cols=77  Identities=9%  Similarity=0.124  Sum_probs=55.3

Q ss_pred             CCCCCEEEEecCCchHHHHHHHHHHHc-CC-EEEEEeCCHHHHHHHHHhcCCC--ee--EecCCCccHHHHHHhHCCCCc
Q 028523           16 PKQGEYVFVSAASGAVGQLVGQFAKLV-GC-YVVGSAGSKDKVDLLKNKFGFD--EA--FNYKEEPDLDAALKRYFPEGI   89 (208)
Q Consensus        16 ~~~g~~vli~ga~g~vG~~a~qla~~~-g~-~v~~~~~s~~~~~~~~~~~g~~--~v--~~~~~~~~~~~~~~~~~~~~~   89 (208)
                      .-.+.+|||+||+|.+|...++.+... |. +|+++++++.+.+.+.+.+...  ..  .|..+.    +.+.+... ++
T Consensus        18 ~~~~k~vlVTGatG~iG~~l~~~L~~~~g~~~V~~~~r~~~~~~~~~~~~~~~~v~~~~~Dl~d~----~~l~~~~~-~~   92 (344)
T 2gn4_A           18 MLDNQTILITGGTGSFGKCFVRKVLDTTNAKKIIVYSRDELKQSEMAMEFNDPRMRFFIGDVRDL----ERLNYALE-GV   92 (344)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHHCCCSEEEEEESCHHHHHHHHHHHCCTTEEEEECCTTCH----HHHHHHTT-TC
T ss_pred             hhCCCEEEEECCCcHHHHHHHHHHHhhCCCCEEEEEECChhhHHHHHHHhcCCCEEEEECCCCCH----HHHHHHHh-cC
Confidence            346789999999999999999888777 98 9999999988877665455322  12  233332    23333333 59


Q ss_pred             cEEEeCCC
Q 028523           90 NIYFENVG   97 (208)
Q Consensus        90 d~v~d~~g   97 (208)
                      |+||.+++
T Consensus        93 D~Vih~Aa  100 (344)
T 2gn4_A           93 DICIHAAA  100 (344)
T ss_dssp             SEEEECCC
T ss_pred             CEEEECCC
Confidence            99999987

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}

Probab=97.83  E-value=7e-05  Score=61.84  Aligned_cols=105  Identities=18%  Similarity=0.207  Sum_probs=68.4

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCH---------HHHHHHHH---hcCCCeeEecCCCccHHHHHHhHC
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSK---------DKVDLLKN---KFGFDEAFNYKEEPDLDAALKRYF   85 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~---------~~~~~~~~---~~g~~~v~~~~~~~~~~~~~~~~~   85 (208)
                      .|+.++|+||++|+|.+.++.+...|++|++++++.         ++.+.+.+   ..|...+.|..+..+....+.+..
T Consensus         7 ~gkvalVTGas~GIG~a~A~~la~~Ga~Vv~~~~~~~~~~~gr~~~~~~~~~~~i~~~g~~~~~d~~d~~~~~~~v~~~~   86 (604)
T 2et6_A            7 KDKVVIITGAGGGLGKYYSLEFAKLGAKVVVNDLGGALNGQGGNSKAADVVVDEIVKNGGVAVADYNNVLDGDKIVETAV   86 (604)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECC-----------CHHHHHHHHHHHTTCEEEEECCCTTCHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCccccccccchHHHHHHHHHHHhcCCeEEEEcCCHHHHHHHHHHHH
Confidence            578899999999999999999999999999987654         33333222   335444556655434333333322


Q ss_pred             C--CCccEEEeCCCc-h-------------------------hHHHHHHhhcc--CCEEEEEecccc
Q 028523           86 P--EGINIYFENVGG-K-------------------------MLDAVLLNMRI--QGRITLCGMISQ  122 (208)
Q Consensus        86 ~--~~~d~v~d~~g~-~-------------------------~~~~~~~~l~~--~G~~v~~g~~~~  122 (208)
                      .  +++|+++++.|- .                         ..+.+++.|+.  +|++|.+++..+
T Consensus        87 ~~~G~iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~a~~p~m~~~~~G~IVnisS~ag  153 (604)
T 2et6_A           87 KNFGTVHVIINNAGILRDASMKKMTEKDYKLVIDVHLNGAFAVTKAAWPYFQKQKYGRIVNTSSPAG  153 (604)
T ss_dssp             HHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHH
T ss_pred             HHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECCHHH
Confidence            2  369999999872 1                         02446666643  589999987543

>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans}

Probab=97.82  E-value=4.3e-05  Score=56.17  Aligned_cols=77  Identities=17%  Similarity=0.148  Sum_probs=51.0

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCe---eEecCCCccHHHHHHhHC-CCCccEEE
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDE---AFNYKEEPDLDAALKRYF-PEGINIYF   93 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~---v~~~~~~~~~~~~~~~~~-~~~~d~v~   93 (208)
                      +++++||+||++++|.+.++.+...|++|++++++.++.  .. +++...   ..|..+.++..+.+.... -+++|+++
T Consensus         8 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~--~~-~~~~~~~~~~~D~~~~~~v~~~~~~~~~~g~id~lv   84 (257)
T 3tl3_A            8 RDAVAVVTGGASGLGLATTKRLLDAGAQVVVLDIRGEDV--VA-DLGDRARFAAADVTDEAAVASALDLAETMGTLRIVV   84 (257)
T ss_dssp             --CEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCHHH--HH-HTCTTEEEEECCTTCHHHHHHHHHHHHHHSCEEEEE
T ss_pred             cCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCchHHH--HH-hcCCceEEEECCCCCHHHHHHHHHHHHHhCCCCEEE
Confidence            468899999999999999998888999999999855432  33 455432   234444322322222111 23699999


Q ss_pred             eCCC
Q 028523           94 ENVG   97 (208)
Q Consensus        94 d~~g   97 (208)
                      ++.|
T Consensus        85 ~nAg   88 (257)
T 3tl3_A           85 NCAG   88 (257)
T ss_dssp             ECGG
T ss_pred             ECCC
Confidence            9987

>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*

Probab=97.82  E-value=0.00018  Score=54.06  Aligned_cols=103  Identities=10%  Similarity=0.059  Sum_probs=71.6

Q ss_pred             HHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHh---cCCCeeEecCCCccHHHHHHhHCC
Q 028523           10 FFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNK---FGFDEAFNYKEEPDLDAALKRYFP   86 (208)
Q Consensus        10 l~~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~---~g~~~v~~~~~~~~~~~~~~~~~~   86 (208)
                      +.....++++++||-.|+  |.|..+..+++..|.+|++++.+++..+.+++.   .|...-+..... ++.    ++ +
T Consensus        64 ~~~~~~~~~~~~vLDiGc--G~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~-d~~----~~-~  135 (302)
T 3hem_A           64 ALDKLNLEPGMTLLDIGC--GWGSTMRHAVAEYDVNVIGLTLSENQYAHDKAMFDEVDSPRRKEVRIQ-GWE----EF-D  135 (302)
T ss_dssp             HHHTTCCCTTCEEEEETC--TTSHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHSCCSSCEEEEEC-CGG----GC-C
T ss_pred             HHHHcCCCCcCEEEEeec--cCcHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHhcCCCCceEEEEC-CHH----Hc-C
Confidence            335567889999999984  458889999999899999999999988777643   343311111111 222    12 4


Q ss_pred             CCccEEEeCCC----------------chhHHHHHHhhccCCEEEEEecc
Q 028523           87 EGINIYFENVG----------------GKMLDAVLLNMRIQGRITLCGMI  120 (208)
Q Consensus        87 ~~~d~v~d~~g----------------~~~~~~~~~~l~~~G~~v~~g~~  120 (208)
                      +.+|+|+....                ...+..+.+.|+|||+++.....
T Consensus       136 ~~fD~v~~~~~~~~~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~  185 (302)
T 3hem_A          136 EPVDRIVSLGAFEHFADGAGDAGFERYDTFFKKFYNLTPDDGRMLLHTIT  185 (302)
T ss_dssp             CCCSEEEEESCGGGTTCCSSCCCTTHHHHHHHHHHHSSCTTCEEEEEEEE
T ss_pred             CCccEEEEcchHHhcCccccccchhHHHHHHHHHHHhcCCCcEEEEEEEe
Confidence            57999986432                13578889999999999887654

>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*

Probab=97.81  E-value=0.00014  Score=55.04  Aligned_cols=103  Identities=14%  Similarity=0.176  Sum_probs=70.4

Q ss_pred             HHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhc---CCCeeEecCCCccHHHHHHhHCC
Q 028523           10 FFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKF---GFDEAFNYKEEPDLDAALKRYFP   86 (208)
Q Consensus        10 l~~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~---g~~~v~~~~~~~~~~~~~~~~~~   86 (208)
                      +.+...++++++||-.|+ | .|..+..+++..|++|++++.+++..+.+++.+   |...-+..... ++.    +. +
T Consensus        82 ~~~~~~~~~~~~vLDiGc-G-~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~-d~~----~~-~  153 (318)
T 2fk8_A           82 NLDKLDLKPGMTLLDIGC-G-WGTTMRRAVERFDVNVIGLTLSKNQHARCEQVLASIDTNRSRQVLLQ-GWE----DF-A  153 (318)
T ss_dssp             HHTTSCCCTTCEEEEESC-T-TSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEES-CGG----GC-C
T ss_pred             HHHhcCCCCcCEEEEEcc-c-chHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCceEEEEC-ChH----HC-C
Confidence            334456789999999984 4 488889999888999999999999888777432   33211111111 221    11 2


Q ss_pred             CCccEEEeC-----CC----chhHHHHHHhhccCCEEEEEecc
Q 028523           87 EGINIYFEN-----VG----GKMLDAVLLNMRIQGRITLCGMI  120 (208)
Q Consensus        87 ~~~d~v~d~-----~g----~~~~~~~~~~l~~~G~~v~~g~~  120 (208)
                      +.+|+|+..     .+    ...+..+.+.|+|||+++.....
T Consensus       154 ~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~  196 (318)
T 2fk8_A          154 EPVDRIVSIEAFEHFGHENYDDFFKRCFNIMPADGRMTVQSSV  196 (318)
T ss_dssp             CCCSEEEEESCGGGTCGGGHHHHHHHHHHHSCTTCEEEEEEEE
T ss_pred             CCcCEEEEeChHHhcCHHHHHHHHHHHHHhcCCCcEEEEEEec
Confidence            469999875     33    23577888999999999876543

>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}

Probab=97.81  E-value=0.00012  Score=53.46  Aligned_cols=103  Identities=12%  Similarity=0.062  Sum_probs=70.3

Q ss_pred             hcCCCCCCEEEEecCCchHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHh---cCCCeeEecCCCccHHHHHHhHCCC
Q 028523           13 VCSPKQGEYVFVSAASGAVGQLVGQFAKLV--GCYVVGSAGSKDKVDLLKNK---FGFDEAFNYKEEPDLDAALKRYFPE   87 (208)
Q Consensus        13 ~~~~~~g~~vli~ga~g~vG~~a~qla~~~--g~~v~~~~~s~~~~~~~~~~---~g~~~v~~~~~~~~~~~~~~~~~~~   87 (208)
                      .....++.+||-.|+  +.|..+..+++.+  +.+|++++.+++..+.+++.   .|...-+..... +..+.+......
T Consensus        58 l~~~~~~~~VLdiG~--G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~-d~~~~l~~~~~~  134 (248)
T 3tfw_A           58 LVRLTQAKRILEIGT--LGGYSTIWMARELPADGQLLTLEADAHHAQVARENLQLAGVDQRVTLREG-PALQSLESLGEC  134 (248)
T ss_dssp             HHHHHTCSEEEEECC--TTSHHHHHHHTTSCTTCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEES-CHHHHHHTCCSC
T ss_pred             HHhhcCCCEEEEecC--CchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEc-CHHHHHHhcCCC
Confidence            334567899999984  4588888999887  46999999999988777643   354321222223 555545444332


Q ss_pred             -CccEEEeCCCc----hhHHHHHHhhccCCEEEEEe
Q 028523           88 -GINIYFENVGG----KMLDAVLLNMRIQGRITLCG  118 (208)
Q Consensus        88 -~~d~v~d~~g~----~~~~~~~~~l~~~G~~v~~g  118 (208)
                       .||+|+-....    ..+..+.+.|+|||.++...
T Consensus       135 ~~fD~V~~d~~~~~~~~~l~~~~~~LkpGG~lv~~~  170 (248)
T 3tfw_A          135 PAFDLIFIDADKPNNPHYLRWALRYSRPGTLIIGDN  170 (248)
T ss_dssp             CCCSEEEECSCGGGHHHHHHHHHHTCCTTCEEEEEC
T ss_pred             CCeEEEEECCchHHHHHHHHHHHHhcCCCeEEEEeC
Confidence             79999854332    36788899999999887643

>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}

Probab=97.81  E-value=7.9e-05  Score=54.11  Aligned_cols=103  Identities=11%  Similarity=0.104  Sum_probs=70.5

Q ss_pred             HhcCCCCCCEEEEecCCchHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHh---cCCCeeEecCCCccHHHHHHhHC-
Q 028523           12 EVCSPKQGEYVFVSAASGAVGQLVGQFAKLV--GCYVVGSAGSKDKVDLLKNK---FGFDEAFNYKEEPDLDAALKRYF-   85 (208)
Q Consensus        12 ~~~~~~~g~~vli~ga~g~vG~~a~qla~~~--g~~v~~~~~s~~~~~~~~~~---~g~~~v~~~~~~~~~~~~~~~~~-   85 (208)
                      ......++++||-.|+  |.|..+..+++..  +.+|++++.+++..+.+++.   .|....+..... +..+.+.... 
T Consensus        54 ~l~~~~~~~~VLdiG~--G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~v~~~~~-d~~~~~~~~~~  130 (239)
T 2hnk_A           54 ILTKISGAKRIIEIGT--FTGYSSLCFASALPEDGKILCCDVSEEWTNVARKYWKENGLENKIFLKLG-SALETLQVLID  130 (239)
T ss_dssp             HHHHHHTCSEEEEECC--TTCHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEES-CHHHHHHHHHH
T ss_pred             HHHHhhCcCEEEEEeC--CCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEEC-CHHHHHHHHHh
Confidence            3344567899999984  4688999999987  56999999999887777643   354321222222 4444333221 


Q ss_pred             -------------C-CCccEEEeCCCc----hhHHHHHHhhccCCEEEEE
Q 028523           86 -------------P-EGINIYFENVGG----KMLDAVLLNMRIQGRITLC  117 (208)
Q Consensus        86 -------------~-~~~d~v~d~~g~----~~~~~~~~~l~~~G~~v~~  117 (208)
                                   + +.||+|+...+.    ..+..+.+.|++||.++..
T Consensus       131 ~~~~~~~~~~f~~~~~~fD~I~~~~~~~~~~~~l~~~~~~L~pgG~lv~~  180 (239)
T 2hnk_A          131 SKSAPSWASDFAFGPSSIDLFFLDADKENYPNYYPLILKLLKPGGLLIAD  180 (239)
T ss_dssp             CSSCCGGGTTTCCSTTCEEEEEECSCGGGHHHHHHHHHHHEEEEEEEEEE
T ss_pred             hcccccccccccCCCCCcCEEEEeCCHHHHHHHHHHHHHHcCCCeEEEEE
Confidence                         1 469999987653    3568888999999999874

>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*

Probab=97.81  E-value=6.5e-05  Score=54.39  Aligned_cols=102  Identities=17%  Similarity=0.256  Sum_probs=70.2

Q ss_pred             HHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHh---cCCCeeEecCCCccHHHHHHhHCCC
Q 028523           11 FEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNK---FGFDEAFNYKEEPDLDAALKRYFPE   87 (208)
Q Consensus        11 ~~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~---~g~~~v~~~~~~~~~~~~~~~~~~~   87 (208)
                      .+...++++++||-.|+ | .|..+..+++..+.+|++++.+++..+.+++.   .|...+ ..... +..   ......
T Consensus        84 ~~~l~~~~~~~vLdiG~-G-~G~~~~~la~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~v-~~~~~-d~~---~~~~~~  156 (235)
T 1jg1_A           84 LEIANLKPGMNILEVGT-G-SGWNAALISEIVKTDVYTIERIPELVEFAKRNLERAGVKNV-HVILG-DGS---KGFPPK  156 (235)
T ss_dssp             HHHHTCCTTCCEEEECC-T-TSHHHHHHHHHHCSCEEEEESCHHHHHHHHHHHHHTTCCSE-EEEES-CGG---GCCGGG
T ss_pred             HHhcCCCCCCEEEEEeC-C-cCHHHHHHHHHhCCEEEEEeCCHHHHHHHHHHHHHcCCCCc-EEEEC-Ccc---cCCCCC
Confidence            34457889999999984 4 78889999988778999999999887777642   344321 11111 221   111112


Q ss_pred             -CccEEEeCCC-chhHHHHHHhhccCCEEEEEec
Q 028523           88 -GINIYFENVG-GKMLDAVLLNMRIQGRITLCGM  119 (208)
Q Consensus        88 -~~d~v~d~~g-~~~~~~~~~~l~~~G~~v~~g~  119 (208)
                       ++|+|+.+.. ......+.+.|++||+++..-.
T Consensus       157 ~~fD~Ii~~~~~~~~~~~~~~~L~pgG~lvi~~~  190 (235)
T 1jg1_A          157 APYDVIIVTAGAPKIPEPLIEQLKIGGKLIIPVG  190 (235)
T ss_dssp             CCEEEEEECSBBSSCCHHHHHTEEEEEEEEEEEC
T ss_pred             CCccEEEECCcHHHHHHHHHHhcCCCcEEEEEEe
Confidence             5999998776 3456788899999999877543

>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33

Probab=97.80  E-value=9.1e-05  Score=54.66  Aligned_cols=94  Identities=12%  Similarity=0.039  Sum_probs=68.7

Q ss_pred             CCCCEEEEecCCchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHhcCCC-eeEecCCCccHHHHHHhHCCCCccEEEe
Q 028523           17 KQGEYVFVSAASGAVGQLVGQFAKLV-GCYVVGSAGSKDKVDLLKNKFGFD-EAFNYKEEPDLDAALKRYFPEGINIYFE   94 (208)
Q Consensus        17 ~~g~~vli~ga~g~vG~~a~qla~~~-g~~v~~~~~s~~~~~~~~~~~g~~-~v~~~~~~~~~~~~~~~~~~~~~d~v~d   94 (208)
                      .++.+||..|+ |. |..+..+++.. |.+|++++.+++..+.++ +.+.. .++..... ++     ....+.||+|+.
T Consensus        84 ~~~~~vLdiG~-G~-G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~-~~~~~~~~~~~d~~-~~-----~~~~~~fD~v~~  154 (269)
T 1p91_A           84 DKATAVLDIGC-GE-GYYTHAFADALPEITTFGLDVSKVAIKAAA-KRYPQVTFCVASSH-RL-----PFSDTSMDAIIR  154 (269)
T ss_dssp             TTCCEEEEETC-TT-STTHHHHHHTCTTSEEEEEESCHHHHHHHH-HHCTTSEEEECCTT-SC-----SBCTTCEEEEEE
T ss_pred             CCCCEEEEECC-CC-CHHHHHHHHhCCCCeEEEEeCCHHHHHHHH-HhCCCcEEEEcchh-hC-----CCCCCceeEEEE
Confidence            67889999994 55 98899999886 779999999999999888 44432 22222111 11     112237999997


Q ss_pred             CCCchhHHHHHHhhccCCEEEEEec
Q 028523           95 NVGGKMLDAVLLNMRIQGRITLCGM  119 (208)
Q Consensus        95 ~~g~~~~~~~~~~l~~~G~~v~~g~  119 (208)
                      ......+..+.+.|+|||+++....
T Consensus       155 ~~~~~~l~~~~~~L~pgG~l~~~~~  179 (269)
T 1p91_A          155 IYAPCKAEELARVVKPGGWVITATP  179 (269)
T ss_dssp             ESCCCCHHHHHHHEEEEEEEEEEEE
T ss_pred             eCChhhHHHHHHhcCCCcEEEEEEc
Confidence            6556789999999999999987754

>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}

Probab=97.79  E-value=0.0002  Score=51.33  Aligned_cols=95  Identities=13%  Similarity=0.108  Sum_probs=60.9

Q ss_pred             CEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCe-eEecCCCccHHHHHHhHCCCCccEEEeCCCc
Q 028523           20 EYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDE-AFNYKEEPDLDAALKRYFPEGINIYFENVGG   98 (208)
Q Consensus        20 ~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~-v~~~~~~~~~~~~~~~~~~~~~d~v~d~~g~   98 (208)
                      .+|||+||+|.+|...++.+...|.+|+++++++++.+.+.  -+... ..|..+.    +.+.+... ++|+||.+.|.
T Consensus         5 ~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~--~~~~~~~~Dl~d~----~~~~~~~~-~~d~vi~~a~~   77 (227)
T 3dhn_A            5 KKIVLIGASGFVGSALLNEALNRGFEVTAVVRHPEKIKIEN--EHLKVKKADVSSL----DEVCEVCK-GADAVISAFNP   77 (227)
T ss_dssp             CEEEEETCCHHHHHHHHHHHHTTTCEEEEECSCGGGCCCCC--TTEEEECCCTTCH----HHHHHHHT-TCSEEEECCCC
T ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCEEEEEEcCcccchhcc--CceEEEEecCCCH----HHHHHHhc-CCCEEEEeCcC
Confidence            57999999999999999999999999999999977643221  11111 1233332    22232222 59999999874


Q ss_pred             h------------hHHHHHHhhccC--CEEEEEeccc
Q 028523           99 K------------MLDAVLLNMRIQ--GRITLCGMIS  121 (208)
Q Consensus        99 ~------------~~~~~~~~l~~~--G~~v~~g~~~  121 (208)
                      .            .....++.+...  ++++.++...
T Consensus        78 ~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~  114 (227)
T 3dhn_A           78 GWNNPDIYDETIKVYLTIIDGVKKAGVNRFLMVGGAG  114 (227)
T ss_dssp             ------CCSHHHHHHHHHHHHHHHTTCSEEEEECCST
T ss_pred             CCCChhHHHHHHHHHHHHHHHHHHhCCCEEEEeCChh
Confidence            2            123344444443  4898887643

>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A

Probab=97.79  E-value=0.00029  Score=52.52  Aligned_cols=82  Identities=12%  Similarity=0.097  Sum_probs=56.2

Q ss_pred             HHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHhcCC----CeeEecCCCccHHHHHHh
Q 028523            9 GFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGC-YVVGSAGSKDKVDLLKNKFGF----DEAFNYKEEPDLDAALKR   83 (208)
Q Consensus         9 ~l~~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g~-~v~~~~~s~~~~~~~~~~~g~----~~v~~~~~~~~~~~~~~~   83 (208)
                      +|.+...--.+.+++|+|+ |++|.+++..+...|+ +|+++.|+.++.+.+.++++.    ..+...... ++.+.+.+
T Consensus       117 ~l~~~~~~l~~k~vlVlGa-GG~g~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~~~~~~~i~~~~~~-~l~~~l~~  194 (283)
T 3jyo_A          117 GMEEGLPNAKLDSVVQVGA-GGVGNAVAYALVTHGVQKLQVADLDTSRAQALADVINNAVGREAVVGVDAR-GIEDVIAA  194 (283)
T ss_dssp             HHHHHCTTCCCSEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHHTSCCEEEECST-THHHHHHH
T ss_pred             HHHHhCcCcCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhhcCCceEEEcCHH-HHHHHHhc
Confidence            3433333346889999996 9999999988888999 799999999887766545432    122222212 45444443


Q ss_pred             HCCCCccEEEeCCC
Q 028523           84 YFPEGINIYFENVG   97 (208)
Q Consensus        84 ~~~~~~d~v~d~~g   97 (208)
                           +|+||+|++
T Consensus       195 -----~DiVInaTp  203 (283)
T 3jyo_A          195 -----ADGVVNATP  203 (283)
T ss_dssp             -----SSEEEECSS
T ss_pred             -----CCEEEECCC
Confidence                 899999987

>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua}

Probab=97.78  E-value=7.5e-05  Score=52.63  Aligned_cols=63  Identities=13%  Similarity=0.213  Sum_probs=45.4

Q ss_pred             EEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHHHHhHCCCCccEEEeCCC
Q 028523           21 YVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVG   97 (208)
Q Consensus        21 ~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~d~v~d~~g   97 (208)
                      +++|+||+|++|...++.+. .|++|++++++++           ....|..+.+.+.+.+.+.  +++|++|++.|
T Consensus         5 ~vlVtGasg~iG~~~~~~l~-~g~~V~~~~r~~~-----------~~~~D~~~~~~~~~~~~~~--~~~d~vi~~ag   67 (202)
T 3d7l_A            5 KILLIGASGTLGSAVKERLE-KKAEVITAGRHSG-----------DVTVDITNIDSIKKMYEQV--GKVDAIVSATG   67 (202)
T ss_dssp             EEEEETTTSHHHHHHHHHHT-TTSEEEEEESSSS-----------SEECCTTCHHHHHHHHHHH--CCEEEEEECCC
T ss_pred             EEEEEcCCcHHHHHHHHHHH-CCCeEEEEecCcc-----------ceeeecCCHHHHHHHHHHh--CCCCEEEECCC
Confidence            69999999999999998888 8999999997753           1223444432333334433  36899999887

>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}

Probab=97.78  E-value=4.4e-05  Score=55.19  Aligned_cols=101  Identities=10%  Similarity=0.078  Sum_probs=68.1

Q ss_pred             cCCCCCCEEEEecCCchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHh---cCCCeeEecCCCccHHHHHHhHC-CCC
Q 028523           14 CSPKQGEYVFVSAASGAVGQLVGQFAKLV-GCYVVGSAGSKDKVDLLKNK---FGFDEAFNYKEEPDLDAALKRYF-PEG   88 (208)
Q Consensus        14 ~~~~~g~~vli~ga~g~vG~~a~qla~~~-g~~v~~~~~s~~~~~~~~~~---~g~~~v~~~~~~~~~~~~~~~~~-~~~   88 (208)
                      ....++++||-.|+ | .|..+..+++.. +.+|++++.+++..+.+++.   .|...-+..... +..+.+.... .+.
T Consensus        50 ~~~~~~~~vLdiG~-G-~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~-d~~~~~~~~~~~~~  126 (233)
T 2gpy_A           50 LKMAAPARILEIGT-A-IGYSAIRMAQALPEATIVSIERDERRYEEAHKHVKALGLESRIELLFG-DALQLGEKLELYPL  126 (233)
T ss_dssp             HHHHCCSEEEEECC-T-TSHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECS-CGGGSHHHHTTSCC
T ss_pred             HhccCCCEEEEecC-C-CcHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEC-CHHHHHHhcccCCC
Confidence            34567889999984 3 788889999887 57999999999988777643   354221111122 2222222222 247


Q ss_pred             ccEEEeCCCc----hhHHHHHHhhccCCEEEEE
Q 028523           89 INIYFENVGG----KMLDAVLLNMRIQGRITLC  117 (208)
Q Consensus        89 ~d~v~d~~g~----~~~~~~~~~l~~~G~~v~~  117 (208)
                      ||+|+.....    ..+..+.+.|++||.++..
T Consensus       127 fD~I~~~~~~~~~~~~l~~~~~~L~pgG~lv~~  159 (233)
T 2gpy_A          127 FDVLFIDAAKGQYRRFFDMYSPMVRPGGLILSD  159 (233)
T ss_dssp             EEEEEEEGGGSCHHHHHHHHGGGEEEEEEEEEE
T ss_pred             ccEEEECCCHHHHHHHHHHHHHHcCCCeEEEEE
Confidence            9999876552    3567888999999999875

>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti}

Probab=97.78  E-value=1.7e-05  Score=58.56  Aligned_cols=76  Identities=17%  Similarity=0.116  Sum_probs=51.1

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCC-eeEecCCCccHHHHHHhHCC--CCccEEEe
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFD-EAFNYKEEPDLDAALKRYFP--EGINIYFE   94 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~-~v~~~~~~~~~~~~~~~~~~--~~~d~v~d   94 (208)
                      .++++||+||+|++|.+.++.+...|++|++++++.++...    .... ...|..+.+++.+.+.+...  +++|++++
T Consensus        27 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~----~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lv~  102 (260)
T 3un1_A           27 QQKVVVITGASQGIGAGLVRAYRDRNYRVVATSRSIKPSAD----PDIHTVAGDISKPETADRIVREGIERFGRIDSLVN  102 (260)
T ss_dssp             TCCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCCCCSS----TTEEEEESCTTSHHHHHHHHHHHHHHHSCCCEEEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChhhccc----CceEEEEccCCCHHHHHHHHHHHHHHCCCCCEEEE
Confidence            57899999999999999999998899999999987654221    1111 12344443233333333221  26999999


Q ss_pred             CCC
Q 028523           95 NVG   97 (208)
Q Consensus        95 ~~g   97 (208)
                      +.|
T Consensus       103 nAg  105 (260)
T 3un1_A          103 NAG  105 (260)
T ss_dssp             CCC
T ss_pred             CCC
Confidence            987

>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0

Probab=97.78  E-value=6e-05  Score=55.52  Aligned_cols=80  Identities=15%  Similarity=0.216  Sum_probs=52.5

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHH-HHHHHHHhc---CCC-e--eEecCCCccHHHHHHhHCC--CC
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKD-KVDLLKNKF---GFD-E--AFNYKEEPDLDAALKRYFP--EG   88 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~-~~~~~~~~~---g~~-~--v~~~~~~~~~~~~~~~~~~--~~   88 (208)
                      .+.+++|+||++++|...++.+...|++|++++++.+ ..+.+.+.+   +.. .  ..|..+.+++.+.+.+...  ++
T Consensus         6 ~~k~vlVTGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~   85 (264)
T 3i4f_A            6 FVRHALITAGTKGLGKQVTEKLLAKGYSVTVTYHSDTTAMETMKETYKDVEERLQFVQADVTKKEDLHKIVEEAMSHFGK   85 (264)
T ss_dssp             CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTGGGGGGEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred             ccCEEEEeCCCchhHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHhCC
Confidence            3578999999999999999998889999999876644 334443222   221 1  2344443233333333322  26


Q ss_pred             ccEEEeCCC
Q 028523           89 INIYFENVG   97 (208)
Q Consensus        89 ~d~v~d~~g   97 (208)
                      +|++|++.|
T Consensus        86 id~lv~~Ag   94 (264)
T 3i4f_A           86 IDFLINNAG   94 (264)
T ss_dssp             CCEEECCCC
T ss_pred             CCEEEECCc
Confidence            999999988

>3s8m_A Enoyl-ACP reductase; rossmann fold, oxidoreductase, NADH binding, fatty acid SYNT enoyl-ACP; 1.60A {Xanthomonas oryzae PV}

Probab=97.78  E-value=7.9e-05  Score=58.42  Aligned_cols=84  Identities=14%  Similarity=0.069  Sum_probs=55.4

Q ss_pred             cCC-CCCCEEEEecCCchHHHHHHHHHHH-cCCEEEEEeCCHHHH----------------HHHHHhcCCCe---eEecC
Q 028523           14 CSP-KQGEYVFVSAASGAVGQLVGQFAKL-VGCYVVGSAGSKDKV----------------DLLKNKFGFDE---AFNYK   72 (208)
Q Consensus        14 ~~~-~~g~~vli~ga~g~vG~~a~qla~~-~g~~v~~~~~s~~~~----------------~~~~~~~g~~~---v~~~~   72 (208)
                      ..+ +.++++||+||++|+|++.++.+.. .|++|+++.++.+..                +.++ +.|...   ..|..
T Consensus        55 ~~~~~~gKvaLVTGASsGIG~AiA~~LA~~~GA~Vv~~~r~~~~~~~~~~~ag~~n~~a~~~~~~-~~G~~a~~i~~Dvt  133 (422)
T 3s8m_A           55 GVRNDGPKKVLVIGASSGYGLASRITAAFGFGADTLGVFFEKPGTASKAGTAGWYNSAAFDKHAK-AAGLYSKSINGDAF  133 (422)
T ss_dssp             CCCSSSCSEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHH-HTTCCEEEEESCTT
T ss_pred             cccccCCCEEEEECCChHHHHHHHHHHHHhCCCEEEEEeCCchhhhhhhcccccchhHHHHHHHH-hcCCcEEEEEecCC
Confidence            455 4678999999999999998877777 999999998764421                3344 556532   23444


Q ss_pred             CCcc---HHHHHHhHCCCCccEEEeCCCc
Q 028523           73 EEPD---LDAALKRYFPEGINIYFENVGG   98 (208)
Q Consensus        73 ~~~~---~~~~~~~~~~~~~d~v~d~~g~   98 (208)
                      +.+.   +.+.+.+..++++|+++++.|.
T Consensus       134 d~~~v~~~v~~i~~~~~G~IDiLVNNAG~  162 (422)
T 3s8m_A          134 SDAARAQVIELIKTEMGGQVDLVVYSLAS  162 (422)
T ss_dssp             SHHHHHHHHHHHHHHSCSCEEEEEECCCC
T ss_pred             CHHHHHHHHHHHHHHcCCCCCEEEEcCcc
Confidence            4312   2233333342579999998764

>4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A*

Probab=97.76  E-value=0.00011  Score=54.33  Aligned_cols=80  Identities=15%  Similarity=0.126  Sum_probs=51.5

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEe-CCHHHHHHHHHh---cCCC-e--eEecCCCccHHHHHHhHCC--CC
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSA-GSKDKVDLLKNK---FGFD-E--AFNYKEEPDLDAALKRYFP--EG   88 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~-~s~~~~~~~~~~---~g~~-~--v~~~~~~~~~~~~~~~~~~--~~   88 (208)
                      .+.++||+||++++|...++.+...|++|++.+ ++.++.+...++   .+.. .  ..|..+.+++.+.+.+...  ++
T Consensus        25 ~~k~vlVTGas~gIG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~  104 (267)
T 4iiu_A           25 MSRSVLVTGASKGIGRAIARQLAADGFNIGVHYHRDAAGAQETLNAIVANGGNGRLLSFDVANREQCREVLEHEIAQHGA  104 (267)
T ss_dssp             CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHCC
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHhCC
Confidence            467899999999999999999989999986654 555554433322   2332 2  2344443233333333221  36


Q ss_pred             ccEEEeCCC
Q 028523           89 INIYFENVG   97 (208)
Q Consensus        89 ~d~v~d~~g   97 (208)
                      +|++|++.|
T Consensus       105 id~li~nAg  113 (267)
T 4iiu_A          105 WYGVVSNAG  113 (267)
T ss_dssp             CSEEEECCC
T ss_pred             ccEEEECCC
Confidence            999999987

>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13

Probab=97.76  E-value=0.0002  Score=53.11  Aligned_cols=104  Identities=16%  Similarity=0.281  Sum_probs=71.6

Q ss_pred             HHHhcCCCCCCEEEEecCCchHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHh---cCCCeeEecCCCccHHHHHHhH
Q 028523           10 FFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLV--GCYVVGSAGSKDKVDLLKNK---FGFDEAFNYKEEPDLDAALKRY   84 (208)
Q Consensus        10 l~~~~~~~~g~~vli~ga~g~vG~~a~qla~~~--g~~v~~~~~s~~~~~~~~~~---~g~~~v~~~~~~~~~~~~~~~~   84 (208)
                      +.....+.++++||-.|+ |. |..+..+++..  +.+|++++.+++..+.+++.   .|...-+..... ++.+.   +
T Consensus       104 i~~~~~~~~~~~VLDiG~-G~-G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~-d~~~~---~  177 (277)
T 1o54_A          104 IAMMLDVKEGDRIIDTGV-GS-GAMCAVLARAVGSSGKVFAYEKREEFAKLAESNLTKWGLIERVTIKVR-DISEG---F  177 (277)
T ss_dssp             HHHHTTCCTTCEEEEECC-TT-SHHHHHHHHHTTTTCEEEEECCCHHHHHHHHHHHHHTTCGGGEEEECC-CGGGC---C
T ss_pred             HHHHhCCCCCCEEEEECC-cC-CHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEEC-CHHHc---c
Confidence            335567889999999984 44 88888999886  46999999999988777643   354211112122 22211   1


Q ss_pred             CCCCccEEEeCCCc--hhHHHHHHhhccCCEEEEEec
Q 028523           85 FPEGINIYFENVGG--KMLDAVLLNMRIQGRITLCGM  119 (208)
Q Consensus        85 ~~~~~d~v~d~~g~--~~~~~~~~~l~~~G~~v~~g~  119 (208)
                      ..+.+|+|+.....  ..+..+.+.|+++|.++....
T Consensus       178 ~~~~~D~V~~~~~~~~~~l~~~~~~L~pgG~l~~~~~  214 (277)
T 1o54_A          178 DEKDVDALFLDVPDPWNYIDKCWEALKGGGRFATVCP  214 (277)
T ss_dssp             SCCSEEEEEECCSCGGGTHHHHHHHEEEEEEEEEEES
T ss_pred             cCCccCEEEECCcCHHHHHHHHHHHcCCCCEEEEEeC
Confidence            22369999976652  578899999999999988643

>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}

Probab=97.76  E-value=3.2e-05  Score=56.48  Aligned_cols=95  Identities=16%  Similarity=0.218  Sum_probs=59.0

Q ss_pred             CEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHHHHhHCCCCccEEEeCCCc-
Q 028523           20 EYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVGG-   98 (208)
Q Consensus        20 ~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~d~v~d~~g~-   98 (208)
                      .++||+||+|++|..+++.+...|++|+++++++++.+       .....|..+...+.+.+.++ .+++|++|++.|. 
T Consensus         2 k~vlVtGasg~iG~~l~~~L~~~g~~V~~~~r~~~~~~-------~~~~~D~~~~~~~~~~~~~~-~~~~d~vi~~Ag~~   73 (255)
T 2dkn_A            2 SVIAITGSASGIGAALKELLARAGHTVIGIDRGQADIE-------ADLSTPGGRETAVAAVLDRC-GGVLDGLVCCAGVG   73 (255)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSEE-------CCTTSHHHHHHHHHHHHHHH-TTCCSEEEECCCCC
T ss_pred             cEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCChhHcc-------ccccCCcccHHHHHHHHHHc-CCCccEEEECCCCC
Confidence            36999999999999999888888999999998765321       00011111111222233333 2469999998872 


Q ss_pred             h------------------hHHHHHHhhcc--CCEEEEEecccc
Q 028523           99 K------------------MLDAVLLNMRI--QGRITLCGMISQ  122 (208)
Q Consensus        99 ~------------------~~~~~~~~l~~--~G~~v~~g~~~~  122 (208)
                      .                  .++.+.+.+..  .++++.++....
T Consensus        74 ~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~  117 (255)
T 2dkn_A           74 VTAANSGLVVAVNYFGVSALLDGLAEALSRGQQPAAVIVGSIAA  117 (255)
T ss_dssp             TTSSCHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGG
T ss_pred             CcchhHHHHHHHHhHHHHHHHHHHHHHhhhcCCceEEEEecccc
Confidence            2                  12333334433  389999887654

>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=97.75  E-value=5.1e-05  Score=55.65  Aligned_cols=81  Identities=20%  Similarity=0.214  Sum_probs=50.9

Q ss_pred             CCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEe-CCHHHHH----HHHHhcCCCe---eEecCCCccHHHHHHhHC--
Q 028523           16 PKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSA-GSKDKVD----LLKNKFGFDE---AFNYKEEPDLDAALKRYF--   85 (208)
Q Consensus        16 ~~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~-~s~~~~~----~~~~~~g~~~---v~~~~~~~~~~~~~~~~~--   85 (208)
                      ..+++++||+||++++|...++.+...|++|++++ ++.++.+    .++ +.+...   ..|..+.+++.+.+.+..  
T Consensus        10 ~~~~k~vlITGas~giG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   88 (256)
T 3ezl_A           10 VMSQRIAYVTGGMGGIGTSICQRLHKDGFRVVAGCGPNSPRRVKWLEDQK-ALGFDFYASEGNVGDWDSTKQAFDKVKAE   88 (256)
T ss_dssp             ---CEEEEETTTTSHHHHHHHHHHHHTTEEEEEEECTTCSSHHHHHHHHH-HTTCCCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHH-hcCCeeEEEecCCCCHHHHHHHHHHHHHh
Confidence            35688999999999999999998888999999887 4433322    233 344322   234444323333333322  


Q ss_pred             CCCccEEEeCCC
Q 028523           86 PEGINIYFENVG   97 (208)
Q Consensus        86 ~~~~d~v~d~~g   97 (208)
                      -+++|++|++.|
T Consensus        89 ~g~id~lv~~Ag  100 (256)
T 3ezl_A           89 VGEIDVLVNNAG  100 (256)
T ss_dssp             TCCEEEEEECCC
T ss_pred             cCCCCEEEECCC
Confidence            136999999987

>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}

Probab=97.75  E-value=0.00017  Score=52.71  Aligned_cols=104  Identities=13%  Similarity=0.110  Sum_probs=71.9

Q ss_pred             HHHhcCCCCCCEEEEecCCchHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHhc----CCCeeEecCCCccHHHHHHh
Q 028523           10 FFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLV--GCYVVGSAGSKDKVDLLKNKF----GFDEAFNYKEEPDLDAALKR   83 (208)
Q Consensus        10 l~~~~~~~~g~~vli~ga~g~vG~~a~qla~~~--g~~v~~~~~s~~~~~~~~~~~----g~~~v~~~~~~~~~~~~~~~   83 (208)
                      +.....++++++||-.|+ | .|..+..+++..  +.+|++++.+++..+.+++.+    |.+.+ ..... ++.+.  .
T Consensus        88 ~~~~~~~~~~~~vLdiG~-G-~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~g~~~v-~~~~~-d~~~~--~  161 (258)
T 2pwy_A           88 MVTLLDLAPGMRVLEAGT-G-SGGLTLFLARAVGEKGLVESYEARPHHLAQAERNVRAFWQVENV-RFHLG-KLEEA--E  161 (258)
T ss_dssp             HHHHTTCCTTCEEEEECC-T-TSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCCCCCE-EEEES-CGGGC--C
T ss_pred             HHHHcCCCCCCEEEEECC-C-cCHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCCE-EEEEC-chhhc--C
Confidence            335567899999999984 4 488899999886  469999999999888877432    53222 11111 22111  1


Q ss_pred             HCCCCccEEEeCCCc--hhHHHHHHhhccCCEEEEEec
Q 028523           84 YFPEGINIYFENVGG--KMLDAVLLNMRIQGRITLCGM  119 (208)
Q Consensus        84 ~~~~~~d~v~d~~g~--~~~~~~~~~l~~~G~~v~~g~  119 (208)
                      +..+.+|+|+...+.  ..+..+.+.|+++|+++.+..
T Consensus       162 ~~~~~~D~v~~~~~~~~~~l~~~~~~L~~gG~l~~~~~  199 (258)
T 2pwy_A          162 LEEAAYDGVALDLMEPWKVLEKAALALKPDRFLVAYLP  199 (258)
T ss_dssp             CCTTCEEEEEEESSCGGGGHHHHHHHEEEEEEEEEEES
T ss_pred             CCCCCcCEEEECCcCHHHHHHHHHHhCCCCCEEEEEeC
Confidence            122369999976652  578899999999999988643

>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*

Probab=97.74  E-value=0.00023  Score=52.04  Aligned_cols=104  Identities=16%  Similarity=0.217  Sum_probs=72.9

Q ss_pred             HHHhcCCCCCCEEEEecCCchHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHh---cCCCeeEecCCCccHHHHHHhH
Q 028523           10 FFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLV--GCYVVGSAGSKDKVDLLKNK---FGFDEAFNYKEEPDLDAALKRY   84 (208)
Q Consensus        10 l~~~~~~~~g~~vli~ga~g~vG~~a~qla~~~--g~~v~~~~~s~~~~~~~~~~---~g~~~v~~~~~~~~~~~~~~~~   84 (208)
                      +.....++++++||-.|+ | .|..+..+++..  +.+|++++.+++..+.+++.   .|....+..... ++.+.   .
T Consensus        85 i~~~~~~~~~~~vldiG~-G-~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~v~~~~~-d~~~~---~  158 (255)
T 3mb5_A           85 IVAYAGISPGDFIVEAGV-G-SGALTLFLANIVGPEGRVVSYEIREDFAKLAWENIKWAGFDDRVTIKLK-DIYEG---I  158 (255)
T ss_dssp             HHHHTTCCTTCEEEEECC-T-TSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHTCTTTEEEECS-CGGGC---C
T ss_pred             HHHhhCCCCCCEEEEecC-C-chHHHHHHHHHhCCCeEEEEEecCHHHHHHHHHHHHHcCCCCceEEEEC-chhhc---c
Confidence            445567899999999984 3 488899999886  56999999999888777643   354331122222 32211   1


Q ss_pred             CCCCccEEEeCCCc--hhHHHHHHhhccCCEEEEEec
Q 028523           85 FPEGINIYFENVGG--KMLDAVLLNMRIQGRITLCGM  119 (208)
Q Consensus        85 ~~~~~d~v~d~~g~--~~~~~~~~~l~~~G~~v~~g~  119 (208)
                      ..+.+|+|+...+.  ..+..+.+.|+++|+++.+..
T Consensus       159 ~~~~~D~v~~~~~~~~~~l~~~~~~L~~gG~l~~~~~  195 (255)
T 3mb5_A          159 EEENVDHVILDLPQPERVVEHAAKALKPGGFFVAYTP  195 (255)
T ss_dssp             CCCSEEEEEECSSCGGGGHHHHHHHEEEEEEEEEEES
T ss_pred             CCCCcCEEEECCCCHHHHHHHHHHHcCCCCEEEEEEC
Confidence            22369999987763  478999999999999987643

>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*

Probab=97.74  E-value=0.0012  Score=50.48  Aligned_cols=74  Identities=9%  Similarity=0.114  Sum_probs=50.4

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHH----HHHHHHHhc------CCCee--EecCCCccHHHHHHhHC
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKD----KVDLLKNKF------GFDEA--FNYKEEPDLDAALKRYF   85 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~----~~~~~~~~~------g~~~v--~~~~~~~~~~~~~~~~~   85 (208)
                      .+.+|||+||+|.+|...++.+...|.+|++++++..    ..+.+. ..      ....+  .|..+.    +.+.+..
T Consensus        24 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~Dl~d~----~~~~~~~   98 (351)
T 3ruf_A           24 SPKTWLITGVAGFIGSNLLEKLLKLNQVVIGLDNFSTGHQYNLDEVK-TLVSTEQWSRFCFIEGDIRDL----TTCEQVM   98 (351)
T ss_dssp             SCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHH-HTSCHHHHTTEEEEECCTTCH----HHHHHHT
T ss_pred             CCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCCCchhhhhhhh-hccccccCCceEEEEccCCCH----HHHHHHh
Confidence            4679999999999999999999889999999998543    333333 22      11122  233322    2333333


Q ss_pred             CCCccEEEeCCC
Q 028523           86 PEGINIYFENVG   97 (208)
Q Consensus        86 ~~~~d~v~d~~g   97 (208)
                      . ++|+||.+.+
T Consensus        99 ~-~~d~Vih~A~  109 (351)
T 3ruf_A           99 K-GVDHVLHQAA  109 (351)
T ss_dssp             T-TCSEEEECCC
T ss_pred             c-CCCEEEECCc
Confidence            3 6999999987

>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A*

Probab=97.74  E-value=0.00011  Score=53.35  Aligned_cols=73  Identities=21%  Similarity=0.138  Sum_probs=49.8

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHhcCCCe-eEecCCCccHHHHHHhHCCCCccEEEe
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLV--GCYVVGSAGSKDKVDLLKNKFGFDE-AFNYKEEPDLDAALKRYFPEGINIYFE   94 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~--g~~v~~~~~s~~~~~~~~~~~g~~~-v~~~~~~~~~~~~~~~~~~~~~d~v~d   94 (208)
                      .+.+|||+||+|.+|...++.+...  |++|+++++++++.+.+.  -+... ..|..+.    +.+.+... ++|++|+
T Consensus         3 ~~~~ilVtGasG~iG~~l~~~l~~~~~g~~V~~~~r~~~~~~~~~--~~~~~~~~D~~d~----~~~~~~~~-~~d~vi~   75 (253)
T 1xq6_A            3 NLPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKIG--GEADVFIGDITDA----DSINPAFQ-GIDALVI   75 (253)
T ss_dssp             SCCEEEEESTTSHHHHHHHHHHHHTTTTCEEEEEESCHHHHHHTT--CCTTEEECCTTSH----HHHHHHHT-TCSEEEE
T ss_pred             CCCEEEEEcCCcHHHHHHHHHHHhcCCCcEEEEEEcCCCchhhcC--CCeeEEEecCCCH----HHHHHHHc-CCCEEEE
Confidence            4678999999999999999888888  789999999876654331  12221 2344332    22332222 4899999


Q ss_pred             CCC
Q 028523           95 NVG   97 (208)
Q Consensus        95 ~~g   97 (208)
                      +.+
T Consensus        76 ~a~   78 (253)
T 1xq6_A           76 LTS   78 (253)
T ss_dssp             CCC
T ss_pred             ecc
Confidence            887

>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}

Probab=97.74  E-value=0.00012  Score=52.90  Aligned_cols=101  Identities=13%  Similarity=0.107  Sum_probs=69.1

Q ss_pred             cCCCCCCEEEEecCCchHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHh---cCCCeeEecCCCccHHHHHHhHC--C
Q 028523           14 CSPKQGEYVFVSAASGAVGQLVGQFAKLV--GCYVVGSAGSKDKVDLLKNK---FGFDEAFNYKEEPDLDAALKRYF--P   86 (208)
Q Consensus        14 ~~~~~g~~vli~ga~g~vG~~a~qla~~~--g~~v~~~~~s~~~~~~~~~~---~g~~~v~~~~~~~~~~~~~~~~~--~   86 (208)
                      ....++++||-.|+  +.|..++.+++.+  +.++++++.+++..+.+++.   .|....+..... +..+.+..+.  +
T Consensus        68 ~~~~~~~~vLdiG~--G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~~-d~~~~l~~l~~~~  144 (232)
T 3cbg_A           68 ISLTGAKQVLEIGV--FRGYSALAMALQLPPDGQIIACDQDPNATAIAKKYWQKAGVAEKISLRLG-PALATLEQLTQGK  144 (232)
T ss_dssp             HHHHTCCEEEEECC--TTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEES-CHHHHHHHHHTSS
T ss_pred             HHhcCCCEEEEecC--CCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEc-CHHHHHHHHHhcC
Confidence            34456789999984  4889999999887  56999999999987777643   354322222223 4444444432  1


Q ss_pred             --CCccEEEeCCC-c---hhHHHHHHhhccCCEEEEE
Q 028523           87 --EGINIYFENVG-G---KMLDAVLLNMRIQGRITLC  117 (208)
Q Consensus        87 --~~~d~v~d~~g-~---~~~~~~~~~l~~~G~~v~~  117 (208)
                        +.||+||-... .   ..+..+++.|++||.++.-
T Consensus       145 ~~~~fD~V~~d~~~~~~~~~l~~~~~~LkpgG~lv~~  181 (232)
T 3cbg_A          145 PLPEFDLIFIDADKRNYPRYYEIGLNLLRRGGLMVID  181 (232)
T ss_dssp             SCCCEEEEEECSCGGGHHHHHHHHHHTEEEEEEEEEE
T ss_pred             CCCCcCEEEECCCHHHHHHHHHHHHHHcCCCeEEEEe
Confidence              46999985433 2   3578889999999999874

>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}

Probab=97.74  E-value=0.0001  Score=52.49  Aligned_cols=104  Identities=15%  Similarity=0.183  Sum_probs=70.7

Q ss_pred             HHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcC--CEEEEEeCCHHHHHHHHHh---cCCCeeEecCCCccHHHHHHhH
Q 028523           10 FFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVG--CYVVGSAGSKDKVDLLKNK---FGFDEAFNYKEEPDLDAALKRY   84 (208)
Q Consensus        10 l~~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g--~~v~~~~~s~~~~~~~~~~---~g~~~v~~~~~~~~~~~~~~~~   84 (208)
                      +.....+.++++||..|+ | .|..+..+++..|  .+|++++.+++..+.+++.   .|...+ ..... +....+.  
T Consensus        69 ~~~~~~~~~~~~vLdiG~-G-~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~v-~~~~~-d~~~~~~--  142 (215)
T 2yxe_A           69 MCELLDLKPGMKVLEIGT-G-CGYHAAVTAEIVGEDGLVVSIERIPELAEKAERTLRKLGYDNV-IVIVG-DGTLGYE--  142 (215)
T ss_dssp             HHHHTTCCTTCEEEEECC-T-TSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHTCTTE-EEEES-CGGGCCG--
T ss_pred             HHHhhCCCCCCEEEEECC-C-ccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCe-EEEEC-CcccCCC--
Confidence            335567889999999995 4 5888999999886  7999999999887777642   243321 11111 2211111  


Q ss_pred             CCCCccEEEeCCC-chhHHHHHHhhccCCEEEEEec
Q 028523           85 FPEGINIYFENVG-GKMLDAVLLNMRIQGRITLCGM  119 (208)
Q Consensus        85 ~~~~~d~v~d~~g-~~~~~~~~~~l~~~G~~v~~g~  119 (208)
                      ..+.+|+|+.+.. ......+.+.|+++|+++..-.
T Consensus       143 ~~~~fD~v~~~~~~~~~~~~~~~~L~pgG~lv~~~~  178 (215)
T 2yxe_A          143 PLAPYDRIYTTAAGPKIPEPLIRQLKDGGKLLMPVG  178 (215)
T ss_dssp             GGCCEEEEEESSBBSSCCHHHHHTEEEEEEEEEEES
T ss_pred             CCCCeeEEEECCchHHHHHHHHHHcCCCcEEEEEEC
Confidence            1236999998776 3455788899999999887643

>3zu3_A Putative reductase YPO4104/Y4119/YP_4011; oxidoreductase, fatty acid biosynthesis II, short-chain dehydrogenase reductase superfamily; HET: NAI; 1.80A {Yersinia pestis} PDB: 3zu4_A* 3zu5_A* 3zu2_A*

Probab=97.74  E-value=0.00014  Score=56.55  Aligned_cols=84  Identities=11%  Similarity=0.017  Sum_probs=53.6

Q ss_pred             cCC-CCCCEEEEecCCchHHHHHHHHHHH-cCCEEEEEeCCHHH---------------HH-HHHHhcCCCe---eEecC
Q 028523           14 CSP-KQGEYVFVSAASGAVGQLVGQFAKL-VGCYVVGSAGSKDK---------------VD-LLKNKFGFDE---AFNYK   72 (208)
Q Consensus        14 ~~~-~~g~~vli~ga~g~vG~~a~qla~~-~g~~v~~~~~s~~~---------------~~-~~~~~~g~~~---v~~~~   72 (208)
                      ..+ ..++++||+||++++|++.++.+.. .|++|++++++.+.               .+ .++ +.|...   ..|..
T Consensus        41 ~~~~~~gKvaLVTGas~GIG~AiA~~LA~g~GA~Vv~~~~~~~~~~~~~~~~gwyn~~~~~~~~~-~~G~~a~~i~~Dvt  119 (405)
T 3zu3_A           41 GPIANGPKRVLVIGASTGYGLAARITAAFGCGADTLGVFFERPGEEGKPGTSGWYNSAAFHKFAA-QKGLYAKSINGDAF  119 (405)
T ss_dssp             CCCTTCCSEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCBTTBCCCHHHHHHHHHHHHHH-HTTCCEEEEESCTT
T ss_pred             CCcCCCCCEEEEeCcchHHHHHHHHHHHHhcCCEEEEEeCCchhhhhhcccccchhHHHHHHHHH-hcCCceEEEECCCC
Confidence            455 5678899999999999998877777 99999988765432               12 333 556432   23444


Q ss_pred             CCccHHHHHHhHC--CCCccEEEeCCCc
Q 028523           73 EEPDLDAALKRYF--PEGINIYFENVGG   98 (208)
Q Consensus        73 ~~~~~~~~~~~~~--~~~~d~v~d~~g~   98 (208)
                      +.+.....+.+..  -+++|+++++.|.
T Consensus       120 d~~~v~~~v~~i~~~~G~IDiLVNNAG~  147 (405)
T 3zu3_A          120 SDEIKQLTIDAIKQDLGQVDQVIYSLAS  147 (405)
T ss_dssp             SHHHHHHHHHHHHHHTSCEEEEEECCCC
T ss_pred             CHHHHHHHHHHHHHHcCCCCEEEEcCcc
Confidence            3322333333221  1469999999873

>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5

Probab=97.73  E-value=0.00025  Score=52.60  Aligned_cols=75  Identities=12%  Similarity=0.155  Sum_probs=53.4

Q ss_pred             CCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHHHHhHCCCCccEEEeCC
Q 028523           17 KQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENV   96 (208)
Q Consensus        17 ~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~d~v~d~~   96 (208)
                      -++.+++|+|+ |++|.++++.+...|++|+++.++.++.+.+.++++....++..+.    +.+.+   +++|++++++
T Consensus       117 l~~k~vlViGa-Gg~g~a~a~~L~~~G~~V~v~~R~~~~~~~la~~~~~~~~~~~~~~----~~~~~---~~~DivVn~t  188 (271)
T 1nyt_A          117 RPGLRILLIGA-GGASRGVLLPLLSLDCAVTITNRTVSRAEELAKLFAHTGSIQALSM----DELEG---HEFDLIINAT  188 (271)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHTGGGSSEEECCS----GGGTT---CCCSEEEECC
T ss_pred             cCCCEEEEECC-cHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHhhccCCeeEecH----HHhcc---CCCCEEEECC
Confidence            36789999997 8999999999999999999999998887666546654111111111    01111   4699999999


Q ss_pred             Cch
Q 028523           97 GGK   99 (208)
Q Consensus        97 g~~   99 (208)
                      +..
T Consensus       189 ~~~  191 (271)
T 1nyt_A          189 SSG  191 (271)
T ss_dssp             SCG
T ss_pred             CCC
Confidence            843

>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor}

Probab=97.73  E-value=1.5e-05  Score=58.56  Aligned_cols=74  Identities=15%  Similarity=0.165  Sum_probs=50.6

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCC-eeEecCCCccHHHHHHhHC--CCCccEEEe
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFD-EAFNYKEEPDLDAALKRYF--PEGINIYFE   94 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~-~v~~~~~~~~~~~~~~~~~--~~~~d~v~d   94 (208)
                      .+.++||+||+|++|.+.++.+...|++|+++++++++.+.      .. ...|..+.+++.+.+.+..  -+++|++|+
T Consensus        20 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~------~~~~~~Dl~d~~~v~~~~~~~~~~~g~iD~lv~   93 (253)
T 2nm0_A           20 MSRSVLVTGGNRGIGLAIARAFADAGDKVAITYRSGEPPEG------FLAVKCDITDTEQVEQAYKEIEETHGPVEVLIA   93 (253)
T ss_dssp             CCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSCCCTT------SEEEECCTTSHHHHHHHHHHHHHHTCSCSEEEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHhhcc------ceEEEecCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence            46889999999999999999998899999999987654321      11 1234444323333333321  136899999


Q ss_pred             CCC
Q 028523           95 NVG   97 (208)
Q Consensus        95 ~~g   97 (208)
                      +.|
T Consensus        94 nAg   96 (253)
T 2nm0_A           94 NAG   96 (253)
T ss_dssp             ECS
T ss_pred             CCC
Confidence            877

>4eue_A Putative reductase CA_C0462; TER, biofuel, synthetic biology, catalytic mechan substrate specificity, oxidoreductase; HET: NAI; 2.00A {Clostridium acetobutylicum} PDB: 4euf_A* 4euh_A*

Probab=97.73  E-value=0.00017  Score=56.74  Aligned_cols=85  Identities=12%  Similarity=0.065  Sum_probs=52.7

Q ss_pred             cCCCCCCEEEEecCCchHHHH--HHHHHHHcCCEEEEEeCCHH---------------HHHHHHHhcCCCe---eEecCC
Q 028523           14 CSPKQGEYVFVSAASGAVGQL--VGQFAKLVGCYVVGSAGSKD---------------KVDLLKNKFGFDE---AFNYKE   73 (208)
Q Consensus        14 ~~~~~g~~vli~ga~g~vG~~--a~qla~~~g~~v~~~~~s~~---------------~~~~~~~~~g~~~---v~~~~~   73 (208)
                      ..+..|+++||+||++|+|++  .+......|++|++++++..               ..+...++.|...   ..|..+
T Consensus        55 ~~~~~gK~aLVTGassGIG~A~aia~ala~~Ga~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~Dvtd  134 (418)
T 4eue_A           55 IGFRGPKKVLIVGASSGFGLATRISVAFGGPEAHTIGVSYETGATDRRIGTAGWYNNIFFKEFAKKKGLVAKNFIEDAFS  134 (418)
T ss_dssp             CCCCCCSEEEEESCSSHHHHHHHHHHHHSSSCCEEEEEECCCCCCSSCCCCHHHHHHHHHHHHHHHTTCCEEEEESCTTC
T ss_pred             CcCCCCCEEEEECCCcHHHHHHHHHHHHHhCCCEEEEEecCcchhhhcccccccchHHHHHHHHHHcCCcEEEEEeeCCC
Confidence            445789999999999999998  44444455999999987532               2222222556532   234444


Q ss_pred             CccHHHHHHhHCC--CCccEEEeCCCc
Q 028523           74 EPDLDAALKRYFP--EGINIYFENVGG   98 (208)
Q Consensus        74 ~~~~~~~~~~~~~--~~~d~v~d~~g~   98 (208)
                      .+...+.+.....  +++|+++++.|.
T Consensus       135 ~~~v~~~v~~i~~~~G~IDiLVnNAG~  161 (418)
T 4eue_A          135 NETKDKVIKYIKDEFGKIDLFVYSLAA  161 (418)
T ss_dssp             HHHHHHHHHHHHHTTCCEEEEEECCCC
T ss_pred             HHHHHHHHHHHHHHcCCCCEEEECCcc
Confidence            3233333333322  379999998874

>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A

Probab=97.73  E-value=0.00011  Score=55.92  Aligned_cols=101  Identities=19%  Similarity=0.096  Sum_probs=64.9

Q ss_pred             CCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhc----CCC-ee---EecCCCccHHHHHHhHCCC
Q 028523           16 PKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKF----GFD-EA---FNYKEEPDLDAALKRYFPE   87 (208)
Q Consensus        16 ~~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~----g~~-~v---~~~~~~~~~~~~~~~~~~~   87 (208)
                      ..++.+|||+||+|.+|..+++.+...|.+|++++++.++.+.+.+.+    +.. ..   .|..+...+    .+... 
T Consensus         8 ~~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~----~~~~~-   82 (342)
T 1y1p_A            8 LPEGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPGRFETAVVEDMLKQGAY----DEVIK-   82 (342)
T ss_dssp             SCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHSTTTEEEEECSCTTSTTTT----TTTTT-
T ss_pred             CCCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCcccHHHHHHHhhccCCCceEEEEecCCcChHHH----HHHHc-
Confidence            456789999999999999999888888999999999887765554221    221 12   233332112    22222 


Q ss_pred             CccEEEeCCCch----h-----------HHHHHHhhc--c-CCEEEEEeccc
Q 028523           88 GINIYFENVGGK----M-----------LDAVLLNMR--I-QGRITLCGMIS  121 (208)
Q Consensus        88 ~~d~v~d~~g~~----~-----------~~~~~~~l~--~-~G~~v~~g~~~  121 (208)
                      ++|+||.+.+..    .           ....++.+.  . .++++.+++..
T Consensus        83 ~~d~vih~A~~~~~~~~~~~~~~~n~~g~~~ll~~~~~~~~~~~iv~~SS~~  134 (342)
T 1y1p_A           83 GAAGVAHIASVVSFSNKYDEVVTPAIGGTLNALRAAAATPSVKRFVLTSSTV  134 (342)
T ss_dssp             TCSEEEECCCCCSCCSCHHHHHHHHHHHHHHHHHHHHTCTTCCEEEEECCGG
T ss_pred             CCCEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCcEEEEeccHH
Confidence            699999998721    0           122334443  2 37899888754

>3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3v1t_C 3v1u_A* 4fw8_A* 3q6i_A* 3m1l_A

Probab=97.70  E-value=0.00014  Score=58.04  Aligned_cols=80  Identities=16%  Similarity=0.259  Sum_probs=53.9

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHH--HHHHHHHhcCCCe-eEecCCCccHHHHHHh---HCCCCccE
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKD--KVDLLKNKFGFDE-AFNYKEEPDLDAALKR---YFPEGINI   91 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~--~~~~~~~~~g~~~-v~~~~~~~~~~~~~~~---~~~~~~d~   91 (208)
                      ++.++||+||+|++|...++.+...|++|+++.++..  ..+...++++... ..|..+.+.....+.+   ..++++|+
T Consensus       212 ~gk~~LVTGgsgGIG~aiA~~La~~Ga~Vvl~~r~~~~~~l~~~~~~~~~~~~~~Dvtd~~~v~~~~~~~~~~~g~~id~  291 (454)
T 3u0b_A          212 DGKVAVVTGAARGIGATIAEVFARDGATVVAIDVDGAAEDLKRVADKVGGTALTLDVTADDAVDKITAHVTEHHGGKVDI  291 (454)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHHHTCEEEECCTTSTTHHHHHHHHHHHHSTTCCSE
T ss_pred             CCCEEEEeCCchHHHHHHHHHHHHCCCEEEEEeCCccHHHHHHHHHHcCCeEEEEecCCHHHHHHHHHHHHHHcCCCceE
Confidence            5789999999999999998888888999999987543  2333332555532 3455554233333333   33335999


Q ss_pred             EEeCCC
Q 028523           92 YFENVG   97 (208)
Q Consensus        92 v~d~~g   97 (208)
                      +|++.|
T Consensus       292 lV~nAG  297 (454)
T 3u0b_A          292 LVNNAG  297 (454)
T ss_dssp             EEECCC
T ss_pred             EEECCc
Confidence            999987

>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}

Probab=97.70  E-value=0.00029  Score=51.12  Aligned_cols=101  Identities=11%  Similarity=0.086  Sum_probs=68.3

Q ss_pred             cCCCCCCEEEEecCCchHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHh---cCCCeeEecCCCccHHHHHHhHC---
Q 028523           14 CSPKQGEYVFVSAASGAVGQLVGQFAKLV--GCYVVGSAGSKDKVDLLKNK---FGFDEAFNYKEEPDLDAALKRYF---   85 (208)
Q Consensus        14 ~~~~~g~~vli~ga~g~vG~~a~qla~~~--g~~v~~~~~s~~~~~~~~~~---~g~~~v~~~~~~~~~~~~~~~~~---   85 (208)
                      ....++.+||-.|+  +.|..++.+++.+  +.++++++.+++..+.+++.   .|...-+..... +..+.+....   
T Consensus        66 ~~~~~~~~VLeiG~--G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~g-da~~~l~~l~~~~  142 (237)
T 3c3y_A           66 LKLVNAKKTIEVGV--FTGYSLLLTALSIPDDGKITAIDFDREAYEIGLPFIRKAGVEHKINFIES-DAMLALDNLLQGQ  142 (237)
T ss_dssp             HHHTTCCEEEEECC--TTSHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEES-CHHHHHHHHHHST
T ss_pred             HHhhCCCEEEEeCC--CCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEc-CHHHHHHHHHhcc
Confidence            34467789999984  5688888899886  56999999999987777643   355322222222 4444443331   


Q ss_pred             --CCCccEEEeCCCc----hhHHHHHHhhccCCEEEEE
Q 028523           86 --PEGINIYFENVGG----KMLDAVLLNMRIQGRITLC  117 (208)
Q Consensus        86 --~~~~d~v~d~~g~----~~~~~~~~~l~~~G~~v~~  117 (208)
                        .+.||+||-....    ..+..+.+.|++||.++.-
T Consensus       143 ~~~~~fD~I~~d~~~~~~~~~l~~~~~~L~pGG~lv~d  180 (237)
T 3c3y_A          143 ESEGSYDFGFVDADKPNYIKYHERLMKLVKVGGIVAYD  180 (237)
T ss_dssp             TCTTCEEEEEECSCGGGHHHHHHHHHHHEEEEEEEEEE
T ss_pred             CCCCCcCEEEECCchHHHHHHHHHHHHhcCCCeEEEEe
Confidence              3479999865442    3578889999999998764

>4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp}

Probab=97.69  E-value=2.1e-05  Score=57.32  Aligned_cols=100  Identities=13%  Similarity=0.103  Sum_probs=62.7

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHH-cCCEEEEEeCCHH-HHHHHHHhcCCCeeEecCCCccHHHHHHhHCCCCccEEEeC
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKL-VGCYVVGSAGSKD-KVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFEN   95 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~-~g~~v~~~~~s~~-~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~d~v~d~   95 (208)
                      ++.++||+||++++|.+.++.+.. .|++|+.++++++ ..+    .+ .....|..+.+++.+.+.....+++|+++++
T Consensus         3 ~~k~vlITGas~gIG~~~a~~l~~~~g~~v~~~~~~~~~~~~----~~-~~~~~Dv~~~~~v~~~~~~~~~~~id~lv~n   77 (244)
T 4e4y_A            3 AMANYLVTGGSKGIGKAVVELLLQNKNHTVINIDIQQSFSAE----NL-KFIKADLTKQQDITNVLDIIKNVSFDGIFLN   77 (244)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHTTSTTEEEEEEESSCCCCCT----TE-EEEECCTTCHHHHHHHHHHTTTCCEEEEEEC
T ss_pred             CCCeEEEeCCCChHHHHHHHHHHhcCCcEEEEeccccccccc----cc-eEEecCcCCHHHHHHHHHHHHhCCCCEEEEC
Confidence            467899999999999998876665 7889999887654 111    11 0012344444234444433333379999999


Q ss_pred             CCc-h----------h---------------HHHHHHhhccCCEEEEEecccc
Q 028523           96 VGG-K----------M---------------LDAVLLNMRIQGRITLCGMISQ  122 (208)
Q Consensus        96 ~g~-~----------~---------------~~~~~~~l~~~G~~v~~g~~~~  122 (208)
                      .|. .          .               .+.+++.|.++|+++.++....
T Consensus        78 Ag~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~~sS~~~  130 (244)
T 4e4y_A           78 AGILIKGSIFDIDIESIKKVLDLNVWSSIYFIKGLENNLKVGASIVFNGSDQC  130 (244)
T ss_dssp             CCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHTGGGEEEEEEEEEECCGGG
T ss_pred             CccCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHhccCcEEEEECCHHH
Confidence            873 1          0               1223345556789999887654

>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}

Probab=97.68  E-value=0.00013  Score=51.64  Aligned_cols=103  Identities=12%  Similarity=0.046  Sum_probs=69.1

Q ss_pred             HHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHh---cCCCeeEecCCCccHHHHHHhHCC
Q 028523           10 FFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNK---FGFDEAFNYKEEPDLDAALKRYFP   86 (208)
Q Consensus        10 l~~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~---~g~~~v~~~~~~~~~~~~~~~~~~   86 (208)
                      +.....++++++||-.|+ | .|..+..+++. +.+|++++.+++..+.+++.   .|...+ ..... +..+...  ..
T Consensus        69 ~~~~l~~~~~~~vLdiG~-G-~G~~~~~la~~-~~~v~~vD~~~~~~~~a~~~~~~~~~~~v-~~~~~-d~~~~~~--~~  141 (210)
T 3lbf_A           69 MTELLELTPQSRVLEIGT-G-SGYQTAILAHL-VQHVCSVERIKGLQWQARRRLKNLDLHNV-STRHG-DGWQGWQ--AR  141 (210)
T ss_dssp             HHHHTTCCTTCEEEEECC-T-TSHHHHHHHHH-SSEEEEEESCHHHHHHHHHHHHHTTCCSE-EEEES-CGGGCCG--GG
T ss_pred             HHHhcCCCCCCEEEEEcC-C-CCHHHHHHHHh-CCEEEEEecCHHHHHHHHHHHHHcCCCce-EEEEC-CcccCCc--cC
Confidence            335567889999999984 3 58888888887 78999999999988777643   343321 11111 2111111  12


Q ss_pred             CCccEEEeCCC-chhHHHHHHhhccCCEEEEEec
Q 028523           87 EGINIYFENVG-GKMLDAVLLNMRIQGRITLCGM  119 (208)
Q Consensus        87 ~~~d~v~d~~g-~~~~~~~~~~l~~~G~~v~~g~  119 (208)
                      +.||+|+.... ......+.+.|++||+++..-.
T Consensus       142 ~~~D~i~~~~~~~~~~~~~~~~L~pgG~lv~~~~  175 (210)
T 3lbf_A          142 APFDAIIVTAAPPEIPTALMTQLDEGGILVLPVG  175 (210)
T ss_dssp             CCEEEEEESSBCSSCCTHHHHTEEEEEEEEEEEC
T ss_pred             CCccEEEEccchhhhhHHHHHhcccCcEEEEEEc
Confidence            37999998766 3445678899999999887543

>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}

Probab=97.68  E-value=6.9e-05  Score=52.48  Aligned_cols=97  Identities=11%  Similarity=0.064  Sum_probs=63.2

Q ss_pred             cCCCCCCEEEEecCCchHHHHHHHHHHHcC----------CEEEEEeCCHHHHHHHHHhcCCCeeE---ecCCCccHHHH
Q 028523           14 CSPKQGEYVFVSAASGAVGQLVGQFAKLVG----------CYVVGSAGSKDKVDLLKNKFGFDEAF---NYKEEPDLDAA   80 (208)
Q Consensus        14 ~~~~~g~~vli~ga~g~vG~~a~qla~~~g----------~~v~~~~~s~~~~~~~~~~~g~~~v~---~~~~~~~~~~~   80 (208)
                      ..++++++||-.|+ |+ |..+..+++..|          .+|++++.++..      .+.....+   |..+. ...+.
T Consensus        18 ~~~~~~~~vLDlGc-G~-G~~~~~la~~~~~~~~~~~~~~~~v~~vD~s~~~------~~~~~~~~~~~d~~~~-~~~~~   88 (196)
T 2nyu_A           18 QILRPGLRVLDCGA-AP-GAWSQVAVQKVNAAGTDPSSPVGFVLGVDLLHIF------PLEGATFLCPADVTDP-RTSQR   88 (196)
T ss_dssp             CCCCTTCEEEEETC-CS-CHHHHHHHHHTTTTCCCTTSCCCEEEEECSSCCC------CCTTCEEECSCCTTSH-HHHHH
T ss_pred             CCCCCCCEEEEeCC-CC-CHHHHHHHHHhccccccccCCCceEEEEechhcc------cCCCCeEEEeccCCCH-HHHHH
Confidence            45788999999994 55 889999999876          789999988732      11111222   11111 23334


Q ss_pred             HHhHCCC-CccEEEe-----CCCc-------------hhHHHHHHhhccCCEEEEEec
Q 028523           81 LKRYFPE-GINIYFE-----NVGG-------------KMLDAVLLNMRIQGRITLCGM  119 (208)
Q Consensus        81 ~~~~~~~-~~d~v~d-----~~g~-------------~~~~~~~~~l~~~G~~v~~g~  119 (208)
                      +.+..++ .||+|+.     +.+.             ..+..+.+.|+|||+++....
T Consensus        89 ~~~~~~~~~fD~V~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~  146 (196)
T 2nyu_A           89 ILEVLPGRRADVILSDMAPNATGFRDLDHDRLISLCLTLLSVTPDILQPGGTFLCKTW  146 (196)
T ss_dssp             HHHHSGGGCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred             HHHhcCCCCCcEEEeCCCCCCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCEEEEEec
Confidence            4444444 7999994     3331             346678899999999987633

>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*

Probab=97.68  E-value=0.00048  Score=50.29  Aligned_cols=101  Identities=12%  Similarity=0.087  Sum_probs=68.2

Q ss_pred             cCCCCCCEEEEecCCchHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHH---hcCCCeeEecCCCccHHHHHHhHC---
Q 028523           14 CSPKQGEYVFVSAASGAVGQLVGQFAKLV--GCYVVGSAGSKDKVDLLKN---KFGFDEAFNYKEEPDLDAALKRYF---   85 (208)
Q Consensus        14 ~~~~~g~~vli~ga~g~vG~~a~qla~~~--g~~v~~~~~s~~~~~~~~~---~~g~~~v~~~~~~~~~~~~~~~~~---   85 (208)
                      ....++++||-.|  .+.|..++.+++.+  +.+|++++.+++..+.+++   ..|...-+..... +..+.+....   
T Consensus        75 ~~~~~~~~VLeiG--~G~G~~~~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~i~~~~g-da~~~l~~l~~~~  151 (247)
T 1sui_A           75 LKLINAKNTMEIG--VYTGYSLLATALAIPEDGKILAMDINKENYELGLPVIKKAGVDHKIDFREG-PALPVLDEMIKDE  151 (247)
T ss_dssp             HHHTTCCEEEEEC--CGGGHHHHHHHHHSCTTCEEEEEESCCHHHHHHHHHHHHTTCGGGEEEEES-CHHHHHHHHHHSG
T ss_pred             HHhhCcCEEEEeC--CCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEEC-CHHHHHHHHHhcc
Confidence            3445678999998  46788888999886  5799999999988777764   2354321222222 4444443331   


Q ss_pred             --CCCccEEEeCCC----chhHHHHHHhhccCCEEEEE
Q 028523           86 --PEGINIYFENVG----GKMLDAVLLNMRIQGRITLC  117 (208)
Q Consensus        86 --~~~~d~v~d~~g----~~~~~~~~~~l~~~G~~v~~  117 (208)
                        .+.||+||-...    ...+..+.+.|++||.++.-
T Consensus       152 ~~~~~fD~V~~d~~~~~~~~~l~~~~~~LkpGG~lv~d  189 (247)
T 1sui_A          152 KNHGSYDFIFVDADKDNYLNYHKRLIDLVKVGGVIGYD  189 (247)
T ss_dssp             GGTTCBSEEEECSCSTTHHHHHHHHHHHBCTTCCEEEE
T ss_pred             CCCCCEEEEEEcCchHHHHHHHHHHHHhCCCCeEEEEe
Confidence              347999985443    23578899999999998764

>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9

Probab=97.67  E-value=0.0013  Score=43.05  Aligned_cols=77  Identities=18%  Similarity=0.182  Sum_probs=52.9

Q ss_pred             CCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHHHHhHCCCCccEEEeCCCc
Q 028523           19 GEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVGG   98 (208)
Q Consensus        19 g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~d~v~d~~g~   98 (208)
                      +.+|+|.|+ |.+|...++.+...|.+|+++++++++.+.+.+.+|... +..... +. +.+.+..-.++|+++.+++.
T Consensus         4 ~m~i~IiG~-G~iG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~~~~~~~-~~~d~~-~~-~~l~~~~~~~~d~vi~~~~~   79 (140)
T 1lss_A            4 GMYIIIAGI-GRVGYTLAKSLSEKGHDIVLIDIDKDICKKASAEIDALV-INGDCT-KI-KTLEDAGIEDADMYIAVTGK   79 (140)
T ss_dssp             -CEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCSSEE-EESCTT-SH-HHHHHTTTTTCSEEEECCSC
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHhcCcEE-EEcCCC-CH-HHHHHcCcccCCEEEEeeCC
Confidence            357999996 999999999988889999999999888877764456532 221111 22 22322212369999999986


Q ss_pred             h
Q 028523           99 K   99 (208)
Q Consensus        99 ~   99 (208)
                      +
T Consensus        80 ~   80 (140)
T 1lss_A           80 E   80 (140)
T ss_dssp             H
T ss_pred             c
Confidence            4

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}

Probab=97.67  E-value=0.0004  Score=57.39  Aligned_cols=104  Identities=21%  Similarity=0.197  Sum_probs=64.6

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCH-HH-HHHHHHhcCCCeeEecCCC-ccHHHHHHhHCC--CCccEE
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSK-DK-VDLLKNKFGFDEAFNYKEE-PDLDAALKRYFP--EGINIY   92 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~-~~-~~~~~~~~g~~~v~~~~~~-~~~~~~~~~~~~--~~~d~v   92 (208)
                      .|+.++|+||++|+|.+.++.+...|++|++.++.. ++ .+.++ +.|...+....+- .+....+.+...  +++|++
T Consensus       321 ~gkvalVTGas~GIG~a~A~~la~~Ga~Vv~~~~~~~~~~~~~i~-~~g~~~~~~~~Dv~~~~~~~~~~~~~~~G~iDiL  399 (604)
T 2et6_A          321 KDKVVLITGAGAGLGKEYAKWFAKYGAKVVVNDFKDATKTVDEIK-AAGGEAWPDQHDVAKDSEAIIKNVIDKYGTIDIL  399 (604)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEECSSCCHHHHHHHH-HTTCEEEEECCCHHHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCCeEEEECcchHHHHHHHHHHHHCCCEEEEEeCccHHHHHHHHH-hcCCeEEEEEcChHHHHHHHHHHHHHhcCCCCEE
Confidence            467899999999999999999999999999987432 22 23344 4454332222211 121222222211  369999


Q ss_pred             EeCCCc-h--h-----------------------HHHHHHhhc--cCCEEEEEecccc
Q 028523           93 FENVGG-K--M-----------------------LDAVLLNMR--IQGRITLCGMISQ  122 (208)
Q Consensus        93 ~d~~g~-~--~-----------------------~~~~~~~l~--~~G~~v~~g~~~~  122 (208)
                      +++.|- .  .                       .+.+++.|.  .+|+++.+++..+
T Consensus       400 VnNAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IVnisS~ag  457 (604)
T 2et6_A          400 VNNAGILRDRSFAKMSKQEWDSVQQVHLIGTFNLSRLAWPYFVEKQFGRIINITSTSG  457 (604)
T ss_dssp             EECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCHHH
T ss_pred             EECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECChhh
Confidence            999872 1  0                       244566664  3589999987643

>1wwk_A Phosphoglycerate dehydrogenase; riken structural genomics/proteomics initiative, RSGI, structural genomics, oxidoreductase; HET: NAD; 1.90A {Pyrococcus horikoshii}

Probab=97.67  E-value=0.00049  Score=51.98  Aligned_cols=89  Identities=16%  Similarity=0.150  Sum_probs=67.0

Q ss_pred             CCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHHHHhHCCCCccEEEeCC
Q 028523           17 KQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENV   96 (208)
Q Consensus        17 ~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~d~v~d~~   96 (208)
                      -.|.+|.|.| .|.+|...++.++..|.+|++.+++.++ +.+. ++|....       ++.+.+.+     .|+|+.++
T Consensus       140 l~g~~vgIiG-~G~IG~~~A~~l~~~G~~V~~~d~~~~~-~~~~-~~g~~~~-------~l~ell~~-----aDvV~l~~  204 (307)
T 1wwk_A          140 LEGKTIGIIG-FGRIGYQVAKIANALGMNILLYDPYPNE-ERAK-EVNGKFV-------DLETLLKE-----SDVVTIHV  204 (307)
T ss_dssp             CTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSCCH-HHHH-HTTCEEC-------CHHHHHHH-----CSEEEECC
T ss_pred             cCCceEEEEc-cCHHHHHHHHHHHHCCCEEEEECCCCCh-hhHh-hcCcccc-------CHHHHHhh-----CCEEEEec
Confidence            3578999999 5999999999999999999999988776 4555 6776321       33343332     79999988


Q ss_pred             Cc-h----hH-HHHHHhhccCCEEEEEecc
Q 028523           97 GG-K----ML-DAVLLNMRIQGRITLCGMI  120 (208)
Q Consensus        97 g~-~----~~-~~~~~~l~~~G~~v~~g~~  120 (208)
                      .. +    .+ ...+..|++++.++.++..
T Consensus       205 p~~~~t~~li~~~~l~~mk~ga~lin~arg  234 (307)
T 1wwk_A          205 PLVESTYHLINEERLKLMKKTAILINTSRG  234 (307)
T ss_dssp             CCSTTTTTCBCHHHHHHSCTTCEEEECSCG
T ss_pred             CCChHHhhhcCHHHHhcCCCCeEEEECCCC
Confidence            73 2    12 4677889999999988764

>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0

Probab=97.66  E-value=0.0003  Score=49.60  Aligned_cols=101  Identities=12%  Similarity=0.129  Sum_probs=69.7

Q ss_pred             HHhcCCCCCCEEEEecCCchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHh---cCCCe--eEecCCCccHHHHHHhH
Q 028523           11 FEVCSPKQGEYVFVSAASGAVGQLVGQFAKLV-GCYVVGSAGSKDKVDLLKNK---FGFDE--AFNYKEEPDLDAALKRY   84 (208)
Q Consensus        11 ~~~~~~~~g~~vli~ga~g~vG~~a~qla~~~-g~~v~~~~~s~~~~~~~~~~---~g~~~--v~~~~~~~~~~~~~~~~   84 (208)
                      .....++++++||-.|+ | .|..+..+++.. ..+|++++.+++..+.+++.   .|.+.  ++..    +..+.+.. 
T Consensus        33 l~~l~~~~~~~vLDiG~-G-~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~----d~~~~~~~-  105 (204)
T 3e05_A           33 LSKLRLQDDLVMWDIGA-G-SASVSIEASNLMPNGRIFALERNPQYLGFIRDNLKKFVARNVTLVEA----FAPEGLDD-  105 (204)
T ss_dssp             HHHTTCCTTCEEEEETC-T-TCHHHHHHHHHCTTSEEEEEECCHHHHHHHHHHHHHHTCTTEEEEEC----CTTTTCTT-
T ss_pred             HHHcCCCCCCEEEEECC-C-CCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeC----Chhhhhhc-
Confidence            35567889999999984 4 488889999886 36999999999988777642   34432  2221    11111110 


Q ss_pred             CCCCccEEEeCCC----chhHHHHHHhhccCCEEEEEec
Q 028523           85 FPEGINIYFENVG----GKMLDAVLLNMRIQGRITLCGM  119 (208)
Q Consensus        85 ~~~~~d~v~d~~g----~~~~~~~~~~l~~~G~~v~~g~  119 (208)
                       .+.+|+|+....    ...+..+.+.|++||+++....
T Consensus       106 -~~~~D~i~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~  143 (204)
T 3e05_A          106 -LPDPDRVFIGGSGGMLEEIIDAVDRRLKSEGVIVLNAV  143 (204)
T ss_dssp             -SCCCSEEEESCCTTCHHHHHHHHHHHCCTTCEEEEEEC
T ss_pred             -CCCCCEEEECCCCcCHHHHHHHHHHhcCCCeEEEEEec
Confidence             136999998654    2467889999999999988644

>2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus}

Probab=97.66  E-value=0.00012  Score=51.73  Aligned_cols=72  Identities=19%  Similarity=0.269  Sum_probs=49.8

Q ss_pred             EEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCee--EecCCCccHHHHHHhHCCCCccEEEeCCC
Q 028523           21 YVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEA--FNYKEEPDLDAALKRYFPEGINIYFENVG   97 (208)
Q Consensus        21 ~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~v--~~~~~~~~~~~~~~~~~~~~~d~v~d~~g   97 (208)
                      ++||+||+|++|...++.+...  +|+++++++++.+.+.++++. ..  .|..+.+.+.+.+.+  .+++|++|++.|
T Consensus         2 ~vlVtGasg~iG~~la~~l~~~--~V~~~~r~~~~~~~~~~~~~~-~~~~~D~~~~~~~~~~~~~--~~~id~vi~~ag   75 (207)
T 2yut_A            2 RVLITGATGGLGGAFARALKGH--DLLLSGRRAGALAELAREVGA-RALPADLADELEAKALLEE--AGPLDLLVHAVG   75 (207)
T ss_dssp             EEEEETTTSHHHHHHHHHTTTS--EEEEECSCHHHHHHHHHHHTC-EECCCCTTSHHHHHHHHHH--HCSEEEEEECCC
T ss_pred             EEEEEcCCcHHHHHHHHHHHhC--CEEEEECCHHHHHHHHHhccC-cEEEeeCCCHHHHHHHHHh--cCCCCEEEECCC
Confidence            6899999999999887766555  999999998887766545543 22  344433123333333  236999999987

>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A*

Probab=97.64  E-value=8.3e-05  Score=55.23  Aligned_cols=95  Identities=17%  Similarity=0.224  Sum_probs=61.4

Q ss_pred             EEEEecCCchHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHhcCCCe-eEecCCCccHHHHHHhHCCCCccEEEeCCC
Q 028523           21 YVFVSAASGAVGQLVGQFAKLV--GCYVVGSAGSKDKVDLLKNKFGFDE-AFNYKEEPDLDAALKRYFPEGINIYFENVG   97 (208)
Q Consensus        21 ~vli~ga~g~vG~~a~qla~~~--g~~v~~~~~s~~~~~~~~~~~g~~~-v~~~~~~~~~~~~~~~~~~~~~d~v~d~~g   97 (208)
                      +|||+||+|.+|...++.+...  |.+|+++++++++.+.+. ..+... ..|..+.    +.+.+... ++|+||.+.+
T Consensus         1 ~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~~D~~d~----~~~~~~~~-~~d~vi~~a~   74 (286)
T 2zcu_A            1 MIAITGATGQLGHYVIESLMKTVPASQIVAIVRNPAKAQALA-AQGITVRQADYGDE----AALTSALQ-GVEKLLLISS   74 (286)
T ss_dssp             CEEEESTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTCHHHH-HTTCEEEECCTTCH----HHHHHHTT-TCSEEEECC-
T ss_pred             CEEEEcCCchHHHHHHHHHHhhCCCceEEEEEcChHhhhhhh-cCCCeEEEcCCCCH----HHHHHHHh-CCCEEEEeCC
Confidence            4899999999999999888777  889999999887665554 334432 2344332    23333333 5899999887


Q ss_pred             ch------hHHHHHHhhcc-C-CEEEEEeccc
Q 028523           98 GK------MLDAVLLNMRI-Q-GRITLCGMIS  121 (208)
Q Consensus        98 ~~------~~~~~~~~l~~-~-G~~v~~g~~~  121 (208)
                      ..      .....++.+.. + ++++.++...
T Consensus        75 ~~~~~~~~~~~~l~~a~~~~~~~~~v~~Ss~~  106 (286)
T 2zcu_A           75 SEVGQRAPQHRNVINAAKAAGVKFIAYTSLLH  106 (286)
T ss_dssp             -------CHHHHHHHHHHHHTCCEEEEEEETT
T ss_pred             CCchHHHHHHHHHHHHHHHcCCCEEEEECCCC
Confidence            31      23344444433 3 5888887754

>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*

Probab=97.64  E-value=0.00027  Score=50.60  Aligned_cols=103  Identities=13%  Similarity=0.063  Sum_probs=68.7

Q ss_pred             HhcCCCCCCEEEEecCCchHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHH---hcCCCeeEecCCCccHHHHHHhHC-
Q 028523           12 EVCSPKQGEYVFVSAASGAVGQLVGQFAKLV--GCYVVGSAGSKDKVDLLKN---KFGFDEAFNYKEEPDLDAALKRYF-   85 (208)
Q Consensus        12 ~~~~~~~g~~vli~ga~g~vG~~a~qla~~~--g~~v~~~~~s~~~~~~~~~---~~g~~~v~~~~~~~~~~~~~~~~~-   85 (208)
                      ......++.+||-.|+  +.|..+..+++..  +.+|++++.+++..+.+++   ..|...-+..... +..+.+.... 
T Consensus        52 ~l~~~~~~~~vLdiG~--G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~-d~~~~~~~~~~  128 (223)
T 3duw_A           52 LLVQIQGARNILEIGT--LGGYSTIWLARGLSSGGRVVTLEASEKHADIARSNIERANLNDRVEVRTG-LALDSLQQIEN  128 (223)
T ss_dssp             HHHHHHTCSEEEEECC--TTSHHHHHHHTTCCSSCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEES-CHHHHHHHHHH
T ss_pred             HHHHhhCCCEEEEecC--CccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEc-CHHHHHHHHHh
Confidence            3345567899999884  5688888899887  5799999999988777664   2354321222222 4444333322 


Q ss_pred             --CCCccEEEeCCCc----hhHHHHHHhhccCCEEEEE
Q 028523           86 --PEGINIYFENVGG----KMLDAVLLNMRIQGRITLC  117 (208)
Q Consensus        86 --~~~~d~v~d~~g~----~~~~~~~~~l~~~G~~v~~  117 (208)
                        .+.||+||-....    ..+..+.+.|+|||.++..
T Consensus       129 ~~~~~fD~v~~d~~~~~~~~~l~~~~~~L~pgG~lv~~  166 (223)
T 3duw_A          129 EKYEPFDFIFIDADKQNNPAYFEWALKLSRPGTVIIGD  166 (223)
T ss_dssp             TTCCCCSEEEECSCGGGHHHHHHHHHHTCCTTCEEEEE
T ss_pred             cCCCCcCEEEEcCCcHHHHHHHHHHHHhcCCCcEEEEe
Confidence              1369999854432    3578889999999988764

>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}

Probab=97.64  E-value=0.00044  Score=47.42  Aligned_cols=102  Identities=15%  Similarity=0.254  Sum_probs=70.1

Q ss_pred             HhcCCCCCCEEEEecCCchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHH---hcCCC-eeEecCCCccHHHHHHhHCC
Q 028523           12 EVCSPKQGEYVFVSAASGAVGQLVGQFAKLV-GCYVVGSAGSKDKVDLLKN---KFGFD-EAFNYKEEPDLDAALKRYFP   86 (208)
Q Consensus        12 ~~~~~~~g~~vli~ga~g~vG~~a~qla~~~-g~~v~~~~~s~~~~~~~~~---~~g~~-~v~~~~~~~~~~~~~~~~~~   86 (208)
                      ....++++++||-.|+ | .|..+..+++.. +.+|++++.+++..+.+++   ..|.. .+ ....  +..+.+.. ..
T Consensus        19 ~~~~~~~~~~vldiG~-G-~G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~-~~~~--d~~~~~~~-~~   92 (178)
T 3hm2_A           19 SALAPKPHETLWDIGG-G-SGSIAIEWLRSTPQTTAVCFEISEERRERILSNAINLGVSDRI-AVQQ--GAPRAFDD-VP   92 (178)
T ss_dssp             HHHCCCTTEEEEEEST-T-TTHHHHHHHTTSSSEEEEEECSCHHHHHHHHHHHHTTTCTTSE-EEEC--CTTGGGGG-CC
T ss_pred             HHhcccCCCeEEEeCC-C-CCHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHHHHhCCCCCE-EEec--chHhhhhc-cC
Confidence            4457889999999984 4 488899999887 5699999999988777764   23443 23 2221  22112221 11


Q ss_pred             CCccEEEeCCCc---hhHHHHHHhhccCCEEEEEec
Q 028523           87 EGINIYFENVGG---KMLDAVLLNMRIQGRITLCGM  119 (208)
Q Consensus        87 ~~~d~v~d~~g~---~~~~~~~~~l~~~G~~v~~g~  119 (208)
                      +.+|+|+.....   ..+..+.+.|+++|+++....
T Consensus        93 ~~~D~i~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~  128 (178)
T 3hm2_A           93 DNPDVIFIGGGLTAPGVFAAAWKRLPVGGRLVANAV  128 (178)
T ss_dssp             SCCSEEEECC-TTCTTHHHHHHHTCCTTCEEEEEEC
T ss_pred             CCCCEEEECCcccHHHHHHHHHHhcCCCCEEEEEee
Confidence            469999976652   368999999999999987654

>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1

Probab=97.63  E-value=0.00016  Score=51.93  Aligned_cols=104  Identities=10%  Similarity=0.048  Sum_probs=69.9

Q ss_pred             HhcCCCCCCEEEEecCCchHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHh---cCCCeeEecCCCccHHHHHHhHCC
Q 028523           12 EVCSPKQGEYVFVSAASGAVGQLVGQFAKLV--GCYVVGSAGSKDKVDLLKNK---FGFDEAFNYKEEPDLDAALKRYFP   86 (208)
Q Consensus        12 ~~~~~~~g~~vli~ga~g~vG~~a~qla~~~--g~~v~~~~~s~~~~~~~~~~---~g~~~v~~~~~~~~~~~~~~~~~~   86 (208)
                      ......++++||-.|+  +.|..++.+++..  +.+|++++.+++..+.+++.   .|...-+..... +..+.+.....
T Consensus        63 ~l~~~~~~~~vLdiG~--G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~i~~~~~-d~~~~~~~~~~  139 (229)
T 2avd_A           63 NLARLIQAKKALDLGT--FTGYSALALALALPADGRVVTCEVDAQPPELGRPLWRQAEAEHKIDLRLK-PALETLDELLA  139 (229)
T ss_dssp             HHHHHTTCCEEEEECC--TTSHHHHHHHTTSCTTCEEEEEESCSHHHHHHHHHHHHTTCTTTEEEEES-CHHHHHHHHHH
T ss_pred             HHHHhcCCCEEEEEcC--CccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCCCCeEEEEEc-CHHHHHHHHHh
Confidence            3345567889999984  4788899999876  46999999999887777643   354221222222 44444333321


Q ss_pred             ----CCccEEEeCCCc----hhHHHHHHhhccCCEEEEEe
Q 028523           87 ----EGINIYFENVGG----KMLDAVLLNMRIQGRITLCG  118 (208)
Q Consensus        87 ----~~~d~v~d~~g~----~~~~~~~~~l~~~G~~v~~g  118 (208)
                          +.+|+|+.....    ..+..+.+.|++||.++...
T Consensus       140 ~~~~~~~D~v~~d~~~~~~~~~l~~~~~~L~pgG~lv~~~  179 (229)
T 2avd_A          140 AGEAGTFDVAVVDADKENCSAYYERCLQLLRPGGILAVLR  179 (229)
T ss_dssp             TTCTTCEEEEEECSCSTTHHHHHHHHHHHEEEEEEEEEEC
T ss_pred             cCCCCCccEEEECCCHHHHHHHHHHHHHHcCCCeEEEEEC
Confidence                469998865432    36888999999999988753

>1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ...

Probab=97.63  E-value=4.1e-05  Score=58.43  Aligned_cols=78  Identities=13%  Similarity=0.131  Sum_probs=50.4

Q ss_pred             CCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHH----HHHHHhc------CCC-e--eEecCCCccHHHHHHhHC
Q 028523           19 GEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKV----DLLKNKF------GFD-E--AFNYKEEPDLDAALKRYF   85 (208)
Q Consensus        19 g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~----~~~~~~~------g~~-~--v~~~~~~~~~~~~~~~~~   85 (208)
                      +.++||+||+|++|...++.+...|++|+.+.++.++.    +.++ ..      +.. .  ..|..+...+.+.+.+..
T Consensus         2 ~k~vlVTGas~GIG~ala~~L~~~G~~v~~v~r~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~   80 (327)
T 1jtv_A            2 RTVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWE-AARALACPPGSLETLQLDVRDSKSVAAARERVT   80 (327)
T ss_dssp             CEEEEESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTHHHHH-HHHHTTCCTTSEEEEECCTTCHHHHHHHHHTCT
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCceEEEEeecCcHHHHHHHHH-HhhhccCCCCceEEEEecCCCHHHHHHHHHHHh
Confidence            57899999999999999999988999887776543321    1222 22      122 1  234444323444444443


Q ss_pred             CCCccEEEeCCC
Q 028523           86 PEGINIYFENVG   97 (208)
Q Consensus        86 ~~~~d~v~d~~g   97 (208)
                      .+++|++|++.|
T Consensus        81 ~g~iD~lVnnAG   92 (327)
T 1jtv_A           81 EGRVDVLVCNAG   92 (327)
T ss_dssp             TSCCSEEEECCC
T ss_pred             cCCCCEEEECCC
Confidence            347999999886

>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*

Probab=97.61  E-value=6.5e-05  Score=54.54  Aligned_cols=99  Identities=6%  Similarity=-0.025  Sum_probs=66.6

Q ss_pred             CCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCe--eEecCCCccHHHHHHhHCCCCccEE-
Q 028523           16 PKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDE--AFNYKEEPDLDAALKRYFPEGINIY-   92 (208)
Q Consensus        16 ~~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~--v~~~~~~~~~~~~~~~~~~~~~d~v-   92 (208)
                      ..+|.+||-+|.  |.|..+..+++..+.++++++.+++-.+.+++ .....  -+..... +..+.......+.||.| 
T Consensus        58 ~~~G~rVLdiG~--G~G~~~~~~~~~~~~~v~~id~~~~~~~~a~~-~~~~~~~~~~~~~~-~a~~~~~~~~~~~FD~i~  133 (236)
T 3orh_A           58 SSKGGRVLEVGF--GMAIAASKVQEAPIDEHWIIECNDGVFQRLRD-WAPRQTHKVIPLKG-LWEDVAPTLPDGHFDGIL  133 (236)
T ss_dssp             TTTCEEEEEECC--TTSHHHHHHTTSCEEEEEEEECCHHHHHHHHH-HGGGCSSEEEEEES-CHHHHGGGSCTTCEEEEE
T ss_pred             ccCCCeEEEECC--CccHHHHHHHHhCCcEEEEEeCCHHHHHHHHH-HHhhCCCceEEEee-hHHhhcccccccCCceEE
Confidence            468899999994  46888888888777799999999998888873 32211  1111112 45444444444579988 


Q ss_pred             EeCCCc-----------hhHHHHHHhhccCCEEEEEe
Q 028523           93 FENVGG-----------KMLDAVLLNMRIQGRITLCG  118 (208)
Q Consensus        93 ~d~~g~-----------~~~~~~~~~l~~~G~~v~~g  118 (208)
                      +|+...           ..+..+.++|+|||+++.+.
T Consensus       134 ~D~~~~~~~~~~~~~~~~~~~e~~rvLkPGG~l~f~~  170 (236)
T 3orh_A          134 YDTYPLSEETWHTHQFNFIKNHAFRLLKPGGVLTYCN  170 (236)
T ss_dssp             ECCCCCBGGGTTTHHHHHHHHTHHHHEEEEEEEEECC
T ss_pred             EeeeecccchhhhcchhhhhhhhhheeCCCCEEEEEe
Confidence            455431           13567889999999998753

>3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum}

Probab=97.61  E-value=9.8e-05  Score=53.79  Aligned_cols=74  Identities=11%  Similarity=0.126  Sum_probs=48.7

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHHH-----HhHCC--CCcc
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAAL-----KRYFP--EGIN   90 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~~-----~~~~~--~~~d   90 (208)
                      .++++||+||+|++|.+.++.+.. |++|+++++++++.+.+. +......+..    ++.+..     .+...  +++|
T Consensus         4 ~~k~vlITGas~gIG~~~a~~l~~-g~~v~~~~r~~~~~~~~~-~~~~~~~~~~----D~~~~~~~~~~~~~~~~~~~id   77 (245)
T 3e9n_A            4 KKKIAVVTGATGGMGIEIVKDLSR-DHIVYALGRNPEHLAALA-EIEGVEPIES----DIVKEVLEEGGVDKLKNLDHVD   77 (245)
T ss_dssp             --CEEEEESTTSHHHHHHHHHHTT-TSEEEEEESCHHHHHHHH-TSTTEEEEEC----CHHHHHHTSSSCGGGTTCSCCS
T ss_pred             CCCEEEEEcCCCHHHHHHHHHHhC-CCeEEEEeCCHHHHHHHH-hhcCCcceec----ccchHHHHHHHHHHHHhcCCCC
Confidence            468899999999999988877655 899999999998888777 4322222211    222211     11111  2699


Q ss_pred             EEEeCCC
Q 028523           91 IYFENVG   97 (208)
Q Consensus        91 ~v~d~~g   97 (208)
                      +++++.|
T Consensus        78 ~lv~~Ag   84 (245)
T 3e9n_A           78 TLVHAAA   84 (245)
T ss_dssp             EEEECC-
T ss_pred             EEEECCC
Confidence            9999987

>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=97.60  E-value=0.00013  Score=55.63  Aligned_cols=77  Identities=13%  Similarity=0.086  Sum_probs=50.4

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHH----HHHHhcCCC-ee--EecCCCccHHHHHHhHCCCCcc
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVD----LLKNKFGFD-EA--FNYKEEPDLDAALKRYFPEGIN   90 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~----~~~~~~g~~-~v--~~~~~~~~~~~~~~~~~~~~~d   90 (208)
                      .+.+|||+||+|.+|...++.+...|++|++++++.++..    .+.+..+.. ..  .|..+.+.+.+.+..   .++|
T Consensus         4 ~~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~---~~~d   80 (341)
T 3enk_A            4 TKGTILVTGGAGYIGSHTAVELLAHGYDVVIADNLVNSKREAIARIEKITGKTPAFHETDVSDERALARIFDA---HPIT   80 (341)
T ss_dssp             SSCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSSSCTHHHHHHHHHHSCCCEEECCCTTCHHHHHHHHHH---SCCC
T ss_pred             CCcEEEEecCCcHHHHHHHHHHHHCCCcEEEEecCCcchHHHHHHHHhhcCCCceEEEeecCCHHHHHHHHhc---cCCc
Confidence            4568999999999999999999889999999998655322    222112322 22  233333123332322   3699


Q ss_pred             EEEeCCC
Q 028523           91 IYFENVG   97 (208)
Q Consensus        91 ~v~d~~g   97 (208)
                      +||++.+
T Consensus        81 ~vih~A~   87 (341)
T 3enk_A           81 AAIHFAA   87 (341)
T ss_dssp             EEEECCC
T ss_pred             EEEECcc
Confidence            9999987

>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A

Probab=97.60  E-value=2.6e-05  Score=56.64  Aligned_cols=99  Identities=16%  Similarity=0.112  Sum_probs=62.1

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCC--EEEEEeCCHHHHHHHHHhcCCCe-eEecCCCccHHHHHHhHCCCCccEEEe
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGC--YVVGSAGSKDKVDLLKNKFGFDE-AFNYKEEPDLDAALKRYFPEGINIYFE   94 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~--~v~~~~~s~~~~~~~~~~~g~~~-v~~~~~~~~~~~~~~~~~~~~~d~v~d   94 (208)
                      .+.+++|+||+|++|...++.+...|+  +|+++++++++.+... .-+... ..|..+.    +.+.+... ++|++|+
T Consensus        17 ~~~~vlVtGasg~iG~~l~~~L~~~G~~~~V~~~~r~~~~~~~~~-~~~~~~~~~D~~d~----~~~~~~~~-~~d~vi~   90 (242)
T 2bka_A           17 QNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEA-YKNVNQEVVDFEKL----DDYASAFQ-GHDVGFC   90 (242)
T ss_dssp             TCCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSGG-GGGCEEEECCGGGG----GGGGGGGS-SCSEEEE
T ss_pred             cCCeEEEECCCcHHHHHHHHHHHcCCCCCEEEEEEcCCCCccccc-cCCceEEecCcCCH----HHHHHHhc-CCCEEEE
Confidence            367899999999999999998888899  9999998876433221 111211 2233322    12222222 5999999


Q ss_pred             CCCchh---------------HHHHHHhhcc--CCEEEEEecccc
Q 028523           95 NVGGKM---------------LDAVLLNMRI--QGRITLCGMISQ  122 (208)
Q Consensus        95 ~~g~~~---------------~~~~~~~l~~--~G~~v~~g~~~~  122 (208)
                      +.|...               ....++.+.+  .++++.++....
T Consensus        91 ~ag~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~iv~~SS~~~  135 (242)
T 2bka_A           91 CLGTTRGKAGAEGFVRVDRDYVLKSAELAKAGGCKHFNLLSSKGA  135 (242)
T ss_dssp             CCCCCHHHHHHHHHHHHHTHHHHHHHHHHHHTTCCEEEEECCTTC
T ss_pred             CCCcccccCCcccceeeeHHHHHHHHHHHHHCCCCEEEEEccCcC
Confidence            998321               1223334433  368999887654

>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*

Probab=97.58  E-value=0.00022  Score=52.29  Aligned_cols=101  Identities=8%  Similarity=0.066  Sum_probs=69.7

Q ss_pred             HhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCC-C--eeEecCCCccHHHHHHhHCCCC
Q 028523           12 EVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGF-D--EAFNYKEEPDLDAALKRYFPEG   88 (208)
Q Consensus        12 ~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~-~--~v~~~~~~~~~~~~~~~~~~~~   88 (208)
                      +...++++.+||-.|+  |.|..+..+++..+.+|++++.+++..+.+++.... .  .++..    +..+ + ....+.
T Consensus        49 ~~~~~~~~~~vLdiG~--G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~----d~~~-~-~~~~~~  120 (266)
T 3ujc_A           49 SDIELNENSKVLDIGS--GLGGGCMYINEKYGAHTHGIDICSNIVNMANERVSGNNKIIFEAN----DILT-K-EFPENN  120 (266)
T ss_dssp             TTCCCCTTCEEEEETC--TTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHTCCSCTTEEEEEC----CTTT-C-CCCTTC
T ss_pred             HhcCCCCCCEEEEECC--CCCHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhhcCCCeEEEEC----cccc-C-CCCCCc
Confidence            4456788999999984  478888999987789999999999999988843322 1  12211    1111 0 112237


Q ss_pred             ccEEEeCCCc---------hhHHHHHHhhccCCEEEEEecc
Q 028523           89 INIYFENVGG---------KMLDAVLLNMRIQGRITLCGMI  120 (208)
Q Consensus        89 ~d~v~d~~g~---------~~~~~~~~~l~~~G~~v~~g~~  120 (208)
                      +|+|+....-         ..+..+.+.|+|||.++.....
T Consensus       121 fD~v~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~  161 (266)
T 3ujc_A          121 FDLIYSRDAILALSLENKNKLFQKCYKWLKPTGTLLITDYC  161 (266)
T ss_dssp             EEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEE
T ss_pred             EEEEeHHHHHHhcChHHHHHHHHHHHHHcCCCCEEEEEEec
Confidence            9999875321         2468888999999999887653

>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0

Probab=97.58  E-value=0.00029  Score=50.49  Aligned_cols=101  Identities=11%  Similarity=0.083  Sum_probs=68.0

Q ss_pred             cCCCCCCEEEEecCCchHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHh---cCCCeeEecCCCccHHHHHHhHCC--
Q 028523           14 CSPKQGEYVFVSAASGAVGQLVGQFAKLV--GCYVVGSAGSKDKVDLLKNK---FGFDEAFNYKEEPDLDAALKRYFP--   86 (208)
Q Consensus        14 ~~~~~g~~vli~ga~g~vG~~a~qla~~~--g~~v~~~~~s~~~~~~~~~~---~g~~~v~~~~~~~~~~~~~~~~~~--   86 (208)
                      ....++.+||-.|+  |.|..+..+++.+  +.+|++++.+++..+.+++.   .|...-+..... +..+.+.....  
T Consensus        60 ~~~~~~~~vLdiG~--G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~-d~~~~~~~~~~~~  136 (225)
T 3tr6_A           60 VKLMQAKKVIDIGT--FTGYSAIAMGLALPKDGTLITCDVDEKSTALAKEYWEKAGLSDKIGLRLS-PAKDTLAELIHAG  136 (225)
T ss_dssp             HHHHTCSEEEEECC--TTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEES-CHHHHHHHHHTTT
T ss_pred             HHhhCCCEEEEeCC--cchHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHHCCCCCceEEEeC-CHHHHHHHhhhcc
Confidence            34567889998884  4588888999876  56999999999887777643   354321222222 44444443322  


Q ss_pred             --CCccEEEeCCCc----hhHHHHHHhhccCCEEEEE
Q 028523           87 --EGINIYFENVGG----KMLDAVLLNMRIQGRITLC  117 (208)
Q Consensus        87 --~~~d~v~d~~g~----~~~~~~~~~l~~~G~~v~~  117 (208)
                        +.||+|+-....    ..+..+.+.|++||.++..
T Consensus       137 ~~~~fD~v~~~~~~~~~~~~l~~~~~~L~pgG~lv~~  173 (225)
T 3tr6_A          137 QAWQYDLIYIDADKANTDLYYEESLKLLREGGLIAVD  173 (225)
T ss_dssp             CTTCEEEEEECSCGGGHHHHHHHHHHHEEEEEEEEEE
T ss_pred             CCCCccEEEECCCHHHHHHHHHHHHHhcCCCcEEEEe
Confidence              469999854442    2578888999999999864

>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}

Probab=97.58  E-value=0.00049  Score=51.72  Aligned_cols=94  Identities=13%  Similarity=0.024  Sum_probs=63.1

Q ss_pred             CCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHhcCCC--eeEecCCCccHHHHHHhHCCCCccEEE
Q 028523           17 KQGEYVFVSAASGAVGQLVGQFAKLVGC-YVVGSAGSKDKVDLLKNKFGFD--EAFNYKEEPDLDAALKRYFPEGINIYF   93 (208)
Q Consensus        17 ~~g~~vli~ga~g~vG~~a~qla~~~g~-~v~~~~~s~~~~~~~~~~~g~~--~v~~~~~~~~~~~~~~~~~~~~~d~v~   93 (208)
                      -++.+++|+|+ |++|.+++..+...|+ +|++..|+.++.+.+.++++..  .++      ++. .+.+.. .++|+||
T Consensus       139 l~~~~vlVlGa-Gg~g~aia~~L~~~G~~~V~v~nR~~~ka~~la~~~~~~~~~~~------~~~-~~~~~~-~~aDivI  209 (297)
T 2egg_A          139 LDGKRILVIGA-GGGARGIYFSLLSTAAERIDMANRTVEKAERLVREGDERRSAYF------SLA-EAETRL-AEYDIII  209 (297)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHSCSSSCCEE------CHH-HHHHTG-GGCSEEE
T ss_pred             CCCCEEEEECc-HHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhhhccCcee------eHH-HHHhhh-ccCCEEE
Confidence            36789999996 9999999999999998 9999999998877666577652  222      121 122211 2489999


Q ss_pred             eCCCchhH------HHHHHhhccCCEEEEEec
Q 028523           94 ENVGGKML------DAVLLNMRIQGRITLCGM  119 (208)
Q Consensus        94 d~~g~~~~------~~~~~~l~~~G~~v~~g~  119 (208)
                      +|++....      ......++++..++.+..
T Consensus       210 n~t~~~~~~~~~~~~i~~~~l~~~~~v~D~~y  241 (297)
T 2egg_A          210 NTTSVGMHPRVEVQPLSLERLRPGVIVSDIIY  241 (297)
T ss_dssp             ECSCTTCSSCCSCCSSCCTTCCTTCEEEECCC
T ss_pred             ECCCCCCCCCCCCCCCCHHHcCCCCEEEEcCC
Confidence            99984321      011234666666666544

>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D

Probab=97.58  E-value=0.00017  Score=53.60  Aligned_cols=95  Identities=20%  Similarity=0.249  Sum_probs=62.4

Q ss_pred             EEEEecCCchHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHhcCCCe-eEecCCCccHHHHHHhHCCCCccEEEeCCC
Q 028523           21 YVFVSAASGAVGQLVGQFAKLV--GCYVVGSAGSKDKVDLLKNKFGFDE-AFNYKEEPDLDAALKRYFPEGINIYFENVG   97 (208)
Q Consensus        21 ~vli~ga~g~vG~~a~qla~~~--g~~v~~~~~s~~~~~~~~~~~g~~~-v~~~~~~~~~~~~~~~~~~~~~d~v~d~~g   97 (208)
                      +|||+||+|.+|...++.+...  |.+|+++++++++.+.+. ..+... ..|..+.    +.+.+... ++|+||.+.+
T Consensus         2 ~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~l~-~~~~~~~~~D~~d~----~~l~~~~~-~~d~vi~~a~   75 (287)
T 2jl1_A            2 SIAVTGATGQLGGLVIQHLLKKVPASQIIAIVRNVEKASTLA-DQGVEVRHGDYNQP----ESLQKAFA-GVSKLLFISG   75 (287)
T ss_dssp             CEEETTTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTTHHHH-HTTCEEEECCTTCH----HHHHHHTT-TCSEEEECCC
T ss_pred             eEEEEcCCchHHHHHHHHHHHhCCCCeEEEEEcCHHHHhHHh-hcCCeEEEeccCCH----HHHHHHHh-cCCEEEEcCC
Confidence            5899999999999999888777  889999999887766555 334432 2344332    23333333 5899999887


Q ss_pred             ch--------hHHHHHHhhcc-C-CEEEEEeccc
Q 028523           98 GK--------MLDAVLLNMRI-Q-GRITLCGMIS  121 (208)
Q Consensus        98 ~~--------~~~~~~~~l~~-~-G~~v~~g~~~  121 (208)
                      ..        .....++.+.. + ++++.++...
T Consensus        76 ~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~Ss~~  109 (287)
T 2jl1_A           76 PHYDNTLLIVQHANVVKAARDAGVKHIAYTGYAF  109 (287)
T ss_dssp             CCSCHHHHHHHHHHHHHHHHHTTCSEEEEEEETT
T ss_pred             CCcCchHHHHHHHHHHHHHHHcCCCEEEEECCCC
Confidence            31        12233444443 3 4888887654

>3mje_A AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.36A {Streptomyces nodosus} PDB: 3mjc_A* 3mjs_A* 3mjv_A* 3mjt_A*

Probab=97.57  E-value=0.00053  Score=55.22  Aligned_cols=77  Identities=19%  Similarity=0.261  Sum_probs=52.5

Q ss_pred             CEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCHHH-------HHHHHHhcCCCe---eEecCCCccHHHHHHhHCCC-
Q 028523           20 EYVFVSAASGAVGQLVGQFAKLVGC-YVVGSAGSKDK-------VDLLKNKFGFDE---AFNYKEEPDLDAALKRYFPE-   87 (208)
Q Consensus        20 ~~vli~ga~g~vG~~a~qla~~~g~-~v~~~~~s~~~-------~~~~~~~~g~~~---v~~~~~~~~~~~~~~~~~~~-   87 (208)
                      .++||+||+|++|...++.+...|+ +|+.+.++...       .+.+. +.|...   ..|..+...+.+.+.+.... 
T Consensus       240 ~~vLITGgsgGIG~alA~~La~~Ga~~vvl~~R~~~~~~~~~~l~~~l~-~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~g  318 (496)
T 3mje_A          240 GSVLVTGGTGGIGGRVARRLAEQGAAHLVLTSRRGADAPGAAELRAELE-QLGVRVTIAACDAADREALAALLAELPEDA  318 (496)
T ss_dssp             SEEEEETCSSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHH-HTTCEEEEEECCTTCHHHHHHHHHTCCTTS
T ss_pred             CEEEEECCCCchHHHHHHHHHHCCCcEEEEEeCCCCChHHHHHHHHHHH-hcCCeEEEEEccCCCHHHHHHHHHHHHHhC
Confidence            8999999999999999888888898 88888886421       22333 556532   23444432344444444332 


Q ss_pred             CccEEEeCCC
Q 028523           88 GINIYFENVG   97 (208)
Q Consensus        88 ~~d~v~d~~g   97 (208)
                      ++|.+|++.|
T Consensus       319 ~ld~vVh~AG  328 (496)
T 3mje_A          319 PLTAVFHSAG  328 (496)
T ss_dssp             CEEEEEECCC
T ss_pred             CCeEEEECCc
Confidence            7999999987

>2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A

Probab=97.57  E-value=0.00045  Score=52.04  Aligned_cols=92  Identities=12%  Similarity=0.123  Sum_probs=51.1

Q ss_pred             CCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHHHHhHCCCCccEEEeCCCc
Q 028523           19 GEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVGG   98 (208)
Q Consensus        19 g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~d~v~d~~g~   98 (208)
                      +.+|||+||+|.+|...++.+...|.+|++++++..+    . .   ....|..+...+.+.+...   ++|+||++.+.
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~----~-~---~~~~Dl~d~~~~~~~~~~~---~~d~vih~A~~   70 (315)
T 2ydy_A            2 NRRVLVTGATGLLGRAVHKEFQQNNWHAVGCGFRRAR----P-K---FEQVNLLDSNAVHHIIHDF---QPHVIVHCAAE   70 (315)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHTTTCEEEEEC--------------------------CHHHHHHH---CCSEEEECC--
T ss_pred             CCeEEEECCCcHHHHHHHHHHHhCCCeEEEEccCCCC----C-C---eEEecCCCHHHHHHHHHhh---CCCEEEECCcc
Confidence            4689999999999999999888889999999976543    1 1   1112333221333333322   58999998873


Q ss_pred             hh------------------HHHHHHhh-ccCCEEEEEeccc
Q 028523           99 KM------------------LDAVLLNM-RIQGRITLCGMIS  121 (208)
Q Consensus        99 ~~------------------~~~~~~~l-~~~G~~v~~g~~~  121 (208)
                      ..                  ....++.+ +.+++++.++...
T Consensus        71 ~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~v~~SS~~  112 (315)
T 2ydy_A           71 RRPDVVENQPDAASQLNVDASGNLAKEAAAVGAFLIYISSDY  112 (315)
T ss_dssp             -----------------CHHHHHHHHHHHHHTCEEEEEEEGG
T ss_pred             cChhhhhcCHHHHHHHHHHHHHHHHHHHHHcCCeEEEEchHH
Confidence            11                  11233333 3367998888654

>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}

Probab=97.56  E-value=0.0004  Score=53.49  Aligned_cols=37  Identities=14%  Similarity=0.156  Sum_probs=32.7

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHH--cCCEEEEEeCCHH
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKL--VGCYVVGSAGSKD   54 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~--~g~~v~~~~~s~~   54 (208)
                      .+.+|||+||+|.+|...++.+..  .|++|++++++..
T Consensus         9 ~~~~vlVTGatG~IG~~l~~~L~~~~~g~~V~~~~r~~~   47 (362)
T 3sxp_A            9 ENQTILITGGAGFVGSNLAFHFQENHPKAKVVVLDKFRS   47 (362)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHHCTTSEEEEEECCCC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhhCCCCeEEEEECCCc
Confidence            467999999999999999988887  8999999998654

>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}

Probab=97.56  E-value=0.00024  Score=53.36  Aligned_cols=92  Identities=12%  Similarity=0.155  Sum_probs=58.2

Q ss_pred             CCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCH-------HHHHHHHH--hcCCCe-eEecCCCccHHHHHHhHCCCC
Q 028523           19 GEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSK-------DKVDLLKN--KFGFDE-AFNYKEEPDLDAALKRYFPEG   88 (208)
Q Consensus        19 g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~-------~~~~~~~~--~~g~~~-v~~~~~~~~~~~~~~~~~~~~   88 (208)
                      +.+|+|+||+|.+|...++.+...|.+|++.+|++       ++.+.+++  ..|... ..|..+.    +.+.+... +
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d~----~~l~~~~~-~   76 (307)
T 2gas_A            2 ENKILILGPTGAIGRHIVWASIKAGNPTYALVRKTITAANPETKEELIDNYQSLGVILLEGDINDH----ETLVKAIK-Q   76 (307)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHHTCCEEEEECCSCCSSCHHHHHHHHHHHHHTTCEEEECCTTCH----HHHHHHHT-T
T ss_pred             CcEEEEECCCchHHHHHHHHHHhCCCcEEEEECCCcccCChHHHHHHHHHHHhCCCEEEEeCCCCH----HHHHHHHh-C
Confidence            35799999999999999988888899999999886       44443330  234432 2344433    22222222 5


Q ss_pred             ccEEEeCCCch---hHHHHHHhhcc-C--CEEE
Q 028523           89 INIYFENVGGK---MLDAVLLNMRI-Q--GRIT  115 (208)
Q Consensus        89 ~d~v~d~~g~~---~~~~~~~~l~~-~--G~~v  115 (208)
                      +|.||.+.+..   .....++.+.. +  ++++
T Consensus        77 ~d~vi~~a~~~~~~~~~~l~~aa~~~g~v~~~v  109 (307)
T 2gas_A           77 VDIVICAAGRLLIEDQVKIIKAIKEAGNVKKFF  109 (307)
T ss_dssp             CSEEEECSSSSCGGGHHHHHHHHHHHCCCSEEE
T ss_pred             CCEEEECCcccccccHHHHHHHHHhcCCceEEe
Confidence            99999998842   23344444443 3  4676

>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13

Probab=97.56  E-value=0.00054  Score=50.78  Aligned_cols=104  Identities=17%  Similarity=0.157  Sum_probs=71.4

Q ss_pred             HHHhcCCCCCCEEEEecCCchHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHhc----C--CCeeEecCCCccHHHHH
Q 028523           10 FFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLV--GCYVVGSAGSKDKVDLLKNKF----G--FDEAFNYKEEPDLDAAL   81 (208)
Q Consensus        10 l~~~~~~~~g~~vli~ga~g~vG~~a~qla~~~--g~~v~~~~~s~~~~~~~~~~~----g--~~~v~~~~~~~~~~~~~   81 (208)
                      +.....++++++||-.|+ | .|..+..+++..  +.+|++++.+++..+.+++.+    |  .+.+ ..... +..+. 
T Consensus        91 i~~~~~~~~~~~vLdiG~-G-~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~g~~~~~v-~~~~~-d~~~~-  165 (280)
T 1i9g_A           91 IVHEGDIFPGARVLEAGA-G-SGALTLSLLRAVGPAGQVISYEQRADHAEHARRNVSGCYGQPPDNW-RLVVS-DLADS-  165 (280)
T ss_dssp             HHHHTTCCTTCEEEEECC-T-TSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHHTSCCTTE-EEECS-CGGGC-
T ss_pred             HHHHcCCCCCCEEEEEcc-c-ccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCCCcE-EEEEC-chHhc-
Confidence            335567899999999984 4 788889999876  469999999999887776432    4  2221 11111 22111 


Q ss_pred             HhHCCCCccEEEeCCCc--hhHHHHHHhhccCCEEEEEec
Q 028523           82 KRYFPEGINIYFENVGG--KMLDAVLLNMRIQGRITLCGM  119 (208)
Q Consensus        82 ~~~~~~~~d~v~d~~g~--~~~~~~~~~l~~~G~~v~~g~  119 (208)
                       ....+.+|+|+.....  ..+..+.+.|+++|+++.+..
T Consensus       166 -~~~~~~~D~v~~~~~~~~~~l~~~~~~L~pgG~l~~~~~  204 (280)
T 1i9g_A          166 -ELPDGSVDRAVLDMLAPWEVLDAVSRLLVAGGVLMVYVA  204 (280)
T ss_dssp             -CCCTTCEEEEEEESSCGGGGHHHHHHHEEEEEEEEEEES
T ss_pred             -CCCCCceeEEEECCcCHHHHHHHHHHhCCCCCEEEEEeC
Confidence             1112379999876652  578899999999999988654

>2fr1_A Erythromycin synthase, eryai; short chain dehydrogenase/reductase, oxidoreductase; HET: NDP; 1.79A {Saccharopolyspora erythraea} SCOP: c.2.1.2 c.2.1.2 PDB: 2fr0_A*

Probab=97.55  E-value=0.00045  Score=55.57  Aligned_cols=82  Identities=16%  Similarity=0.180  Sum_probs=55.5

Q ss_pred             CCCCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCHHH---H----HHHHHhcCCCe---eEecCCCccHHHHHHh
Q 028523           15 SPKQGEYVFVSAASGAVGQLVGQFAKLVGC-YVVGSAGSKDK---V----DLLKNKFGFDE---AFNYKEEPDLDAALKR   83 (208)
Q Consensus        15 ~~~~g~~vli~ga~g~vG~~a~qla~~~g~-~v~~~~~s~~~---~----~~~~~~~g~~~---v~~~~~~~~~~~~~~~   83 (208)
                      .++++.++||+||+|++|...++.+...|+ +|+.++++...   .    +.++ ..|...   ..|..+...+...+..
T Consensus       222 ~~~~~~~vLITGgtGgIG~~la~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~-~~g~~v~~~~~Dv~d~~~v~~~~~~  300 (486)
T 2fr1_A          222 EWKPTGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELE-ALGARTTVAACDVTDRESVRELLGG  300 (486)
T ss_dssp             CCCCCSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHH-HTTCEEEEEECCTTCHHHHHHHHHT
T ss_pred             CcCCCCEEEEECCCCHHHHHHHHHHHHcCCCEEEEEcCCCCCcHHHHHHHHHHH-hcCCEEEEEEeCCCCHHHHHHHHHH
Confidence            356789999999999999999888877899 59999988642   1    2233 456532   2344443234444444


Q ss_pred             HCC-CCccEEEeCCC
Q 028523           84 YFP-EGINIYFENVG   97 (208)
Q Consensus        84 ~~~-~~~d~v~d~~g   97 (208)
                      ... +++|.||++.|
T Consensus       301 i~~~g~ld~VIh~AG  315 (486)
T 2fr1_A          301 IGDDVPLSAVFHAAA  315 (486)
T ss_dssp             SCTTSCEEEEEECCC
T ss_pred             HHhcCCCcEEEECCc
Confidence            422 26899999987

>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*

Probab=97.55  E-value=0.00019  Score=54.74  Aligned_cols=75  Identities=15%  Similarity=0.252  Sum_probs=50.3

Q ss_pred             CCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHH--HHHHHhcCC--C-ee--EecCCCccHHHHHHhHCCCCccE
Q 028523           19 GEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKV--DLLKNKFGF--D-EA--FNYKEEPDLDAALKRYFPEGINI   91 (208)
Q Consensus        19 g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~--~~~~~~~g~--~-~v--~~~~~~~~~~~~~~~~~~~~~d~   91 (208)
                      +.+|||+||+|.+|...++.+...|++|+++++++++.  +.+. .++.  . ..  .|..+...+.+.+...   ++|+
T Consensus         3 ~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~-~~~~~~~~~~~~~Dl~d~~~~~~~~~~~---~~d~   78 (345)
T 2z1m_A            3 GKRALITGIRGQDGAYLAKLLLEKGYEVYGADRRSGEFASWRLK-ELGIENDVKIIHMDLLEFSNIIRTIEKV---QPDE   78 (345)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCCSTTTTHHHH-HTTCTTTEEECCCCTTCHHHHHHHHHHH---CCSE
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCCcccccccHh-hccccCceeEEECCCCCHHHHHHHHHhc---CCCE
Confidence            57899999999999999988888899999999886542  2344 4421  1 11  2333321233333322   5899


Q ss_pred             EEeCCC
Q 028523           92 YFENVG   97 (208)
Q Consensus        92 v~d~~g   97 (208)
                      ||++.+
T Consensus        79 vih~A~   84 (345)
T 2z1m_A           79 VYNLAA   84 (345)
T ss_dssp             EEECCC
T ss_pred             EEECCC
Confidence            999987

>2z5l_A Tylkr1, tylactone synthase starter module and modules 1 & 2; short-chain dehydrogenase/reductase, rossman fold; 1.95A {Streptomyces fradiae}

Probab=97.54  E-value=0.00062  Score=55.07  Aligned_cols=78  Identities=18%  Similarity=0.234  Sum_probs=53.4

Q ss_pred             CCCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCHHH---H----HHHHHhcCCCe-e--EecCCCccHHHHHHhH
Q 028523           16 PKQGEYVFVSAASGAVGQLVGQFAKLVGC-YVVGSAGSKDK---V----DLLKNKFGFDE-A--FNYKEEPDLDAALKRY   84 (208)
Q Consensus        16 ~~~g~~vli~ga~g~vG~~a~qla~~~g~-~v~~~~~s~~~---~----~~~~~~~g~~~-v--~~~~~~~~~~~~~~~~   84 (208)
                      ++++.++||+||+|++|...++.+...|+ +|+.+.++...   .    +.+. ..|... +  .|..+...+.+.+.. 
T Consensus       256 ~~~~~~vLITGgtGgIG~~lA~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~-~~g~~v~~~~~Dvtd~~~v~~~~~~-  333 (511)
T 2z5l_A          256 WQPSGTVLITGGMGAIGRRLARRLAAEGAERLVLTSRRGPEAPGAAELAEELR-GHGCEVVHAACDVAERDALAALVTA-  333 (511)
T ss_dssp             CCCCSEEEEETTTSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHH-TTTCEEEEEECCSSCHHHHHHHHHH-
T ss_pred             cCCCCEEEEECCCCHHHHHHHHHHHhCCCcEEEEEecCCcccHHHHHHHHHHH-hcCCEEEEEEeCCCCHHHHHHHHhc-
Confidence            56789999999999999999988888899 79999987632   2    2233 445432 2  344443233333333 


Q ss_pred             CCCCccEEEeCCC
Q 028523           85 FPEGINIYFENVG   97 (208)
Q Consensus        85 ~~~~~d~v~d~~g   97 (208)
                        +++|.||++.|
T Consensus       334 --~~ld~VVh~AG  344 (511)
T 2z5l_A          334 --YPPNAVFHTAG  344 (511)
T ss_dssp             --SCCSEEEECCC
T ss_pred             --CCCcEEEECCc
Confidence              46999999987

>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13

Probab=97.54  E-value=0.0002  Score=54.69  Aligned_cols=102  Identities=18%  Similarity=0.206  Sum_probs=66.3

Q ss_pred             HhcCCCCCCEEEEecCCchHHHHHHHHHHHcC--CEEEEEeCCHHHHHHHHHhc---C-----------CC--eeEecCC
Q 028523           12 EVCSPKQGEYVFVSAASGAVGQLVGQFAKLVG--CYVVGSAGSKDKVDLLKNKF---G-----------FD--EAFNYKE   73 (208)
Q Consensus        12 ~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g--~~v~~~~~s~~~~~~~~~~~---g-----------~~--~v~~~~~   73 (208)
                      ....+.+|++||-.|+ |+ |..++.+++..|  .+|++++.+++..+.+++.+   |           ..  .++..  
T Consensus        99 ~~l~~~~g~~VLDiG~-G~-G~~~~~la~~~g~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~ln~~~~~~~~v~~~~~--  174 (336)
T 2b25_A           99 SMMDINPGDTVLEAGS-GS-GGMSLFLSKAVGSQGRVISFEVRKDHHDLAKKNYKHWRDSWKLSHVEEWPDNVDFIHK--  174 (336)
T ss_dssp             HHHTCCTTCEEEEECC-TT-SHHHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHHHHHHHHTTTCSSCCCCCEEEEES--
T ss_pred             HhcCCCCCCEEEEeCC-Cc-CHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHHhhcccccccccccCCceEEEEC--
Confidence            4457899999999984 43 888888888876  69999999998877776422   1           11  12211  


Q ss_pred             CccHHHHHHhHCCCCccEEEeCCCc--hhHHHHHHhhccCCEEEEEec
Q 028523           74 EPDLDAALKRYFPEGINIYFENVGG--KMLDAVLLNMRIQGRITLCGM  119 (208)
Q Consensus        74 ~~~~~~~~~~~~~~~~d~v~d~~g~--~~~~~~~~~l~~~G~~v~~g~  119 (208)
                        +..+....+..+.+|+|+-....  ..+..+.+.|+|||+++.+..
T Consensus       175 --d~~~~~~~~~~~~fD~V~~~~~~~~~~l~~~~~~LkpgG~lv~~~~  220 (336)
T 2b25_A          175 --DISGATEDIKSLTFDAVALDMLNPHVTLPVFYPHLKHGGVCAVYVV  220 (336)
T ss_dssp             --CTTCCC-------EEEEEECSSSTTTTHHHHGGGEEEEEEEEEEES
T ss_pred             --ChHHcccccCCCCeeEEEECCCCHHHHHHHHHHhcCCCcEEEEEeC
Confidence              11111111122359999865553  468899999999999987654

>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*

Probab=97.54  E-value=0.00074  Score=50.99  Aligned_cols=75  Identities=13%  Similarity=0.168  Sum_probs=51.1

Q ss_pred             CCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCC---HHHHHHHHHhcC----CC-eeEecCCCccHHHHHHhHCCC
Q 028523           17 KQGEYVFVSAASGAVGQLVGQFAKLVGC-YVVGSAGS---KDKVDLLKNKFG----FD-EAFNYKEEPDLDAALKRYFPE   87 (208)
Q Consensus        17 ~~g~~vli~ga~g~vG~~a~qla~~~g~-~v~~~~~s---~~~~~~~~~~~g----~~-~v~~~~~~~~~~~~~~~~~~~   87 (208)
                      -.+.+++|+|+ |++|.+++..+...|+ +|+++.|+   .++.+.+.++++    .. .+++..+.+...+.+.     
T Consensus       146 l~gk~~lVlGA-GGaaraia~~L~~~G~~~v~v~nRt~~~~~~a~~la~~~~~~~~~~v~~~~~~~l~~~~~~l~-----  219 (312)
T 3t4e_A          146 MRGKTMVLLGA-GGAATAIGAQAAIEGIKEIKLFNRKDDFFEKAVAFAKRVNENTDCVVTVTDLADQHAFTEALA-----  219 (312)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTHHHHHHHHHHHHHHHSSCEEEEEETTCHHHHHHHHH-----
T ss_pred             cCCCEEEEECc-CHHHHHHHHHHHHcCCCEEEEEECCCchHHHHHHHHHHhhhccCcceEEechHhhhhhHhhcc-----
Confidence            36889999996 9999999998889999 89999999   666665543443    21 2333332100122233     


Q ss_pred             CccEEEeCCC
Q 028523           88 GINIYFENVG   97 (208)
Q Consensus        88 ~~d~v~d~~g   97 (208)
                      .+|+||+|++
T Consensus       220 ~~DiIINaTp  229 (312)
T 3t4e_A          220 SADILTNGTK  229 (312)
T ss_dssp             HCSEEEECSS
T ss_pred             CceEEEECCc
Confidence            3899999987

>1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=97.54  E-value=8e-05  Score=53.95  Aligned_cols=73  Identities=15%  Similarity=0.091  Sum_probs=48.8

Q ss_pred             CCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHHHHhHC-CCCccEEEeCCC
Q 028523           19 GEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYF-PEGINIYFENVG   97 (208)
Q Consensus        19 g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~-~~~~d~v~d~~g   97 (208)
                      +.++||+||+|++|...++.+...|++|++++++++    .. ++- ....|..+.+.+.+.+.+.. .+++|+++++.|
T Consensus         2 ~k~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~----~~-~~~-~~~~D~~~~~~~~~~~~~~~~~~~~d~li~~ag   75 (242)
T 1uay_A            2 ERSALVTGGASGLGRAAALALKARGYRVVVLDLRRE----GE-DLI-YVEGDVTREEDVRRAVARAQEEAPLFAVVSAAG   75 (242)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCC----SS-SSE-EEECCTTCHHHHHHHHHHHHHHSCEEEEEECCC
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEccCcc----cc-ceE-EEeCCCCCHHHHHHHHHHHHhhCCceEEEEccc
Confidence            578999999999999999888888999999998764    11 210 01234444323333333331 126899999876

>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9

Probab=97.53  E-value=0.0034  Score=42.07  Aligned_cols=95  Identities=11%  Similarity=0.043  Sum_probs=59.7

Q ss_pred             CCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCC-HHHHHHHHHhc--CCCeeEecCCCccHHHHHHhHCCCCccEEEeC
Q 028523           19 GEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGS-KDKVDLLKNKF--GFDEAFNYKEEPDLDAALKRYFPEGINIYFEN   95 (208)
Q Consensus        19 g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s-~~~~~~~~~~~--g~~~v~~~~~~~~~~~~~~~~~~~~~d~v~d~   95 (208)
                      .++++|.|+ |.+|...++.+...|.+|++++++ +++.+.+.+.+  |. .++.-+.. + .+.+.+..-.++|.++-+
T Consensus         3 ~~~vlI~G~-G~vG~~la~~L~~~g~~V~vid~~~~~~~~~~~~~~~~~~-~~i~gd~~-~-~~~l~~a~i~~ad~vi~~   78 (153)
T 1id1_A            3 KDHFIVCGH-SILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRLGDNA-DVIPGDSN-D-SSVLKKAGIDRCRAILAL   78 (153)
T ss_dssp             CSCEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHCTTC-EEEESCTT-S-HHHHHHHTTTTCSEEEEC
T ss_pred             CCcEEEECC-CHHHHHHHHHHHHCCCCEEEEECCChHHHHHHHHhhcCCC-eEEEcCCC-C-HHHHHHcChhhCCEEEEe
Confidence            467899995 999999999999899999999986 46555555333  33 23322111 2 233444322369999999


Q ss_pred             CCchhHH----HHHHhhccCCEEEEE
Q 028523           96 VGGKMLD----AVLLNMRIQGRITLC  117 (208)
Q Consensus        96 ~g~~~~~----~~~~~l~~~G~~v~~  117 (208)
                      ++.+..+    ...+.+.+..+++..
T Consensus        79 ~~~d~~n~~~~~~a~~~~~~~~ii~~  104 (153)
T 1id1_A           79 SDNDADNAFVVLSAKDMSSDVKTVLA  104 (153)
T ss_dssp             SSCHHHHHHHHHHHHHHTSSSCEEEE
T ss_pred             cCChHHHHHHHHHHHHHCCCCEEEEE
Confidence            9865332    233344455566654

>1v8b_A Adenosylhomocysteinase; hydrolase; HET: NAD ADN; 2.40A {Plasmodium falciparum} SCOP: c.2.1.4 c.23.12.3

Probab=97.52  E-value=0.00044  Score=55.13  Aligned_cols=92  Identities=18%  Similarity=0.168  Sum_probs=69.2

Q ss_pred             CCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHHHHhHCCCCccEEEeC
Q 028523           16 PKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFEN   95 (208)
Q Consensus        16 ~~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~d~v~d~   95 (208)
                      .-.|.+|.|.| .|.+|..+++.++.+|++|++++++..+...+. ..|.. +     . ++.+.+.     ..|+|+.+
T Consensus       254 ~l~GktVgIIG-~G~IG~~vA~~l~~~G~~Viv~d~~~~~~~~a~-~~g~~-~-----~-~l~ell~-----~aDiVi~~  319 (479)
T 1v8b_A          254 LISGKIVVICG-YGDVGKGCASSMKGLGARVYITEIDPICAIQAV-MEGFN-V-----V-TLDEIVD-----KGDFFITC  319 (479)
T ss_dssp             CCTTSEEEEEC-CSHHHHHHHHHHHHHTCEEEEECSCHHHHHHHH-TTTCE-E-----C-CHHHHTT-----TCSEEEEC
T ss_pred             ccCCCEEEEEe-eCHHHHHHHHHHHhCcCEEEEEeCChhhHHHHH-HcCCE-e-----c-CHHHHHh-----cCCEEEEC
Confidence            45789999999 599999999999999999999999987754444 55652 2     1 3333332     38999998


Q ss_pred             CCch-hH-HHHHHhhccCCEEEEEeccc
Q 028523           96 VGGK-ML-DAVLLNMRIQGRITLCGMIS  121 (208)
Q Consensus        96 ~g~~-~~-~~~~~~l~~~G~~v~~g~~~  121 (208)
                      .+.. .+ ...+..|+++..++.+|...
T Consensus       320 ~~t~~lI~~~~l~~MK~gailiNvgrg~  347 (479)
T 1v8b_A          320 TGNVDVIKLEHLLKMKNNAVVGNIGHFD  347 (479)
T ss_dssp             CSSSSSBCHHHHTTCCTTCEEEECSSTT
T ss_pred             CChhhhcCHHHHhhcCCCcEEEEeCCCC
Confidence            7643 33 47788899999999988643

>3qp9_A Type I polyketide synthase pikaii; rossmann fold, ketoreductase, epimerization, oxidoreductase; 1.88A {Streptomyces venezuelae}

Probab=97.52  E-value=0.00039  Score=56.47  Aligned_cols=82  Identities=11%  Similarity=0.005  Sum_probs=53.9

Q ss_pred             CCCCCCEEEEecCCchHHHHHHHHHHHcCCE-EEEE-eCCH-------------HH----HHHHHHhcCCCe---eEecC
Q 028523           15 SPKQGEYVFVSAASGAVGQLVGQFAKLVGCY-VVGS-AGSK-------------DK----VDLLKNKFGFDE---AFNYK   72 (208)
Q Consensus        15 ~~~~g~~vli~ga~g~vG~~a~qla~~~g~~-v~~~-~~s~-------------~~----~~~~~~~~g~~~---v~~~~   72 (208)
                      .++++.++||+||+|++|...++.+...|++ ++.+ .++.             ++    .+.++ +.|...   ..|..
T Consensus       247 ~~~~~~~vLITGgsgGIG~~lA~~La~~G~~~vvl~~~R~~~~~~~~~~~~~~~~~~~~~~~~l~-~~g~~v~~~~~Dvt  325 (525)
T 3qp9_A          247 WWQADGTVLVTGAEEPAAAEAARRLARDGAGHLLLHTTPSGSEGAEGTSGAAEDSGLAGLVAELA-DLGATATVVTCDLT  325 (525)
T ss_dssp             SSCTTSEEEESSTTSHHHHHHHHHHHHHTCCEEEEEECCCC---------------CHHHHHHHH-HHTCEEEEEECCTT
T ss_pred             eecCCCEEEEECCCCcHHHHHHHHHHHcCCCEEEEEeCCCCCCccccccccccCHHHHHHHHHHH-hcCCEEEEEECCCC
Confidence            3578899999999999999998888778985 6676 6762             22    23333 456532   23444


Q ss_pred             CCccHHHHHHhHCC-CCccEEEeCCC
Q 028523           73 EEPDLDAALKRYFP-EGINIYFENVG   97 (208)
Q Consensus        73 ~~~~~~~~~~~~~~-~~~d~v~d~~g   97 (208)
                      +...+...+.+... +++|.+|++.|
T Consensus       326 d~~~v~~~~~~i~~~g~id~vVh~AG  351 (525)
T 3qp9_A          326 DAEAAARLLAGVSDAHPLSAVLHLPP  351 (525)
T ss_dssp             SHHHHHHHHHTSCTTSCEEEEEECCC
T ss_pred             CHHHHHHHHHHHHhcCCCcEEEECCc
Confidence            43234444444432 27999999987

>2ekl_A D-3-phosphoglycerate dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: NAD; 1.77A {Sulfolobus tokodaii}

Probab=97.52  E-value=0.0008  Score=50.92  Aligned_cols=89  Identities=18%  Similarity=0.132  Sum_probs=66.6

Q ss_pred             CCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHHHHhHCCCCccEEEeCC
Q 028523           17 KQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENV   96 (208)
Q Consensus        17 ~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~d~v~d~~   96 (208)
                      -.|.+|.|+| .|.+|...++.++..|.+|++.+++.++. .+. ++|....       ++.+.+.+     .|+|+.++
T Consensus       140 l~g~~vgIIG-~G~IG~~~A~~l~~~G~~V~~~d~~~~~~-~~~-~~g~~~~-------~l~ell~~-----aDvVvl~~  204 (313)
T 2ekl_A          140 LAGKTIGIVG-FGRIGTKVGIIANAMGMKVLAYDILDIRE-KAE-KINAKAV-------SLEELLKN-----SDVISLHV  204 (313)
T ss_dssp             CTTCEEEEES-CSHHHHHHHHHHHHTTCEEEEECSSCCHH-HHH-HTTCEEC-------CHHHHHHH-----CSEEEECC
T ss_pred             CCCCEEEEEe-eCHHHHHHHHHHHHCCCEEEEECCCcchh-HHH-hcCceec-------CHHHHHhh-----CCEEEEec
Confidence            4678999999 59999999999999999999999887664 355 6776321       33444432     79999988


Q ss_pred             Cc-h----hH-HHHHHhhccCCEEEEEecc
Q 028523           97 GG-K----ML-DAVLLNMRIQGRITLCGMI  120 (208)
Q Consensus        97 g~-~----~~-~~~~~~l~~~G~~v~~g~~  120 (208)
                      .. +    .+ ...+..|++++.++.++..
T Consensus       205 P~~~~t~~li~~~~l~~mk~ga~lIn~arg  234 (313)
T 2ekl_A          205 TVSKDAKPIIDYPQFELMKDNVIIVNTSRA  234 (313)
T ss_dssp             CCCTTSCCSBCHHHHHHSCTTEEEEESSCG
T ss_pred             cCChHHHHhhCHHHHhcCCCCCEEEECCCC
Confidence            73 2    12 5677889999988887763

>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}

Probab=97.51  E-value=0.00054  Score=47.95  Aligned_cols=102  Identities=18%  Similarity=0.198  Sum_probs=67.6

Q ss_pred             cCCCCCCEEEEecCCchHHHHHHHHHHHcC--CEEEEEeCCHHHHHHHHHh---cCCCeeEecCCCccHHHHHHhHCCCC
Q 028523           14 CSPKQGEYVFVSAASGAVGQLVGQFAKLVG--CYVVGSAGSKDKVDLLKNK---FGFDEAFNYKEEPDLDAALKRYFPEG   88 (208)
Q Consensus        14 ~~~~~g~~vli~ga~g~vG~~a~qla~~~g--~~v~~~~~s~~~~~~~~~~---~g~~~v~~~~~~~~~~~~~~~~~~~~   88 (208)
                      ..++++++||-.|+  |.|..+..+++..+  .+|++++.+++..+.+++.   .|...-+..... +..+ +....++.
T Consensus        18 ~~~~~~~~vLDlGc--G~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~-d~~~-~~~~~~~~   93 (197)
T 3eey_A           18 MFVKEGDTVVDATC--GNGNDTAFLASLVGENGRVFGFDIQDKAIANTTKKLTDLNLIDRVTLIKD-GHQN-MDKYIDCP   93 (197)
T ss_dssp             HHCCTTCEEEESCC--TTSHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHHHHHTTCGGGEEEECS-CGGG-GGGTCCSC
T ss_pred             hcCCCCCEEEEcCC--CCCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEEC-CHHH-HhhhccCC
Confidence            45788999999984  34888888898864  5999999999887777642   343111111122 2211 11122347


Q ss_pred             ccEEEeCCCc----------------hhHHHHHHhhccCCEEEEEec
Q 028523           89 INIYFENVGG----------------KMLDAVLLNMRIQGRITLCGM  119 (208)
Q Consensus        89 ~d~v~d~~g~----------------~~~~~~~~~l~~~G~~v~~g~  119 (208)
                      +|+|+...+-                ..+..+.+.|+++|+++....
T Consensus        94 fD~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lk~gG~l~~~~~  140 (197)
T 3eey_A           94 VKAVMFNLGYLPSGDHSISTRPETTIQALSKAMELLVTGGIITVVIY  140 (197)
T ss_dssp             EEEEEEEESBCTTSCTTCBCCHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred             ceEEEEcCCcccCcccccccCcccHHHHHHHHHHhCcCCCEEEEEEc
Confidence            9999865432                368889999999999987653

>3d64_A Adenosylhomocysteinase; structural genomics, ssgcid, S-adenosyl-L-homocysteine hydro NAD, one-carbon metabolism; HET: NAD; 2.30A {Burkholderia pseudomallei} PDB: 3glq_A*

Probab=97.51  E-value=0.00058  Score=54.67  Aligned_cols=92  Identities=16%  Similarity=0.159  Sum_probs=69.1

Q ss_pred             CCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHHHHhHCCCCccEEEeC
Q 028523           16 PKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFEN   95 (208)
Q Consensus        16 ~~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~d~v~d~   95 (208)
                      .-.|.+|.|.| .|.+|..+++.++.+|++|+++++++.+...+. ..|.. +.      ++.+.+.     ..|+|+.+
T Consensus       274 ~L~GktVgIIG-~G~IG~~vA~~l~~~G~~V~v~d~~~~~~~~a~-~~G~~-~~------~l~ell~-----~aDiVi~~  339 (494)
T 3d64_A          274 MIAGKIAVVAG-YGDVGKGCAQSLRGLGATVWVTEIDPICALQAA-MEGYR-VV------TMEYAAD-----KADIFVTA  339 (494)
T ss_dssp             CCTTCEEEEEC-CSHHHHHHHHHHHTTTCEEEEECSCHHHHHHHH-TTTCE-EC------CHHHHTT-----TCSEEEEC
T ss_pred             ccCCCEEEEEc-cCHHHHHHHHHHHHCCCEEEEEeCChHhHHHHH-HcCCE-eC------CHHHHHh-----cCCEEEEC
Confidence            45789999999 599999999999999999999999887654444 45542 11      3333332     38999999


Q ss_pred             CCch-hH-HHHHHhhccCCEEEEEeccc
Q 028523           96 VGGK-ML-DAVLLNMRIQGRITLCGMIS  121 (208)
Q Consensus        96 ~g~~-~~-~~~~~~l~~~G~~v~~g~~~  121 (208)
                      ++.. .+ ...+..|+++..++.++...
T Consensus       340 ~~t~~lI~~~~l~~MK~gAilINvgrg~  367 (494)
T 3d64_A          340 TGNYHVINHDHMKAMRHNAIVCNIGHFD  367 (494)
T ss_dssp             SSSSCSBCHHHHHHCCTTEEEEECSSSS
T ss_pred             CCcccccCHHHHhhCCCCcEEEEcCCCc
Confidence            8743 33 57888999999999988743

>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*

Probab=97.51  E-value=0.00094  Score=46.17  Aligned_cols=103  Identities=17%  Similarity=0.233  Sum_probs=68.8

Q ss_pred             HHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHh---cCCCeeEecCCCccHHHHHHhHCC
Q 028523           10 FFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNK---FGFDEAFNYKEEPDLDAALKRYFP   86 (208)
Q Consensus        10 l~~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~---~g~~~v~~~~~~~~~~~~~~~~~~   86 (208)
                      +.....+.++++||-.|+ |. |..+..+++.. .++++++.+++..+.+++.   .+...-+..... ++.+.+...  
T Consensus        25 ~~~~~~~~~~~~vldiG~-G~-G~~~~~l~~~~-~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~-d~~~~~~~~--   98 (192)
T 1l3i_A           25 IMCLAEPGKNDVAVDVGC-GT-GGVTLELAGRV-RRVYAIDRNPEAISTTEMNLQRHGLGDNVTLMEG-DAPEALCKI--   98 (192)
T ss_dssp             HHHHHCCCTTCEEEEESC-TT-SHHHHHHHTTS-SEEEEEESCHHHHHHHHHHHHHTTCCTTEEEEES-CHHHHHTTS--
T ss_pred             HHHhcCCCCCCEEEEECC-CC-CHHHHHHHHhc-CEEEEEECCHHHHHHHHHHHHHcCCCcceEEEec-CHHHhcccC--
Confidence            334567889999999984 43 88888887766 8999999999887777642   343111111122 444322211  


Q ss_pred             CCccEEEeCCC----chhHHHHHHhhccCCEEEEEe
Q 028523           87 EGINIYFENVG----GKMLDAVLLNMRIQGRITLCG  118 (208)
Q Consensus        87 ~~~d~v~d~~g----~~~~~~~~~~l~~~G~~v~~g  118 (208)
                      +.+|+|+....    ...+..+.+.|+++|.++...
T Consensus        99 ~~~D~v~~~~~~~~~~~~l~~~~~~l~~gG~l~~~~  134 (192)
T 1l3i_A           99 PDIDIAVVGGSGGELQEILRIIKDKLKPGGRIIVTA  134 (192)
T ss_dssp             CCEEEEEESCCTTCHHHHHHHHHHTEEEEEEEEEEE
T ss_pred             CCCCEEEECCchHHHHHHHHHHHHhcCCCcEEEEEe
Confidence            36999997654    246778888999999988754

>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2

Probab=97.51  E-value=0.00063  Score=51.14  Aligned_cols=93  Identities=13%  Similarity=0.155  Sum_probs=58.1

Q ss_pred             CCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCC-----HHHHHHHHH--hcCCCe-eEecCCCccHHHHHHhHCCCCcc
Q 028523           19 GEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGS-----KDKVDLLKN--KFGFDE-AFNYKEEPDLDAALKRYFPEGIN   90 (208)
Q Consensus        19 g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s-----~~~~~~~~~--~~g~~~-v~~~~~~~~~~~~~~~~~~~~~d   90 (208)
                      ..+|+|+||+|.+|...++.+...|.+|++.+|+     +++.+.+.+  ..+... ..|..+.    +.+.+... ++|
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~----~~l~~~~~-~~d   78 (313)
T 1qyd_A            4 KSRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQLGAKLIEASLDDH----QRLVDALK-QVD   78 (313)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHHHHHHHHHHTTTCEEECCCSSCH----HHHHHHHT-TCS
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHhCCCcEEEEECCCcccchhHHHHHHHHHhCCeEEEeCCCCCH----HHHHHHHh-CCC
Confidence            3579999999999999999888889999999987     444444331  223322 2344432    22332222 599


Q ss_pred             EEEeCCCch-------hHHHHHHhhccC---CEEEE
Q 028523           91 IYFENVGGK-------MLDAVLLNMRIQ---GRITL  116 (208)
Q Consensus        91 ~v~d~~g~~-------~~~~~~~~l~~~---G~~v~  116 (208)
                      .||.+.+..       .....++.+...   ++++.
T Consensus        79 ~vi~~a~~~~~~~~~~~~~~l~~aa~~~g~v~~~v~  114 (313)
T 1qyd_A           79 VVISALAGGVLSHHILEQLKLVEAIKEAGNIKRFLP  114 (313)
T ss_dssp             EEEECCCCSSSSTTTTTHHHHHHHHHHSCCCSEEEC
T ss_pred             EEEECCccccchhhHHHHHHHHHHHHhcCCCceEEe
Confidence            999988732       233444555443   47763

>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*

Probab=97.49  E-value=0.0006  Score=50.70  Aligned_cols=101  Identities=11%  Similarity=0.066  Sum_probs=68.6

Q ss_pred             HhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhc---CCCeeEecCCCccHHHHHHhHCCCC
Q 028523           12 EVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKF---GFDEAFNYKEEPDLDAALKRYFPEG   88 (208)
Q Consensus        12 ~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~---g~~~v~~~~~~~~~~~~~~~~~~~~   88 (208)
                      +...++++.+||-.|+  |.|..+..+++..|.+|++++.+++..+.+++.+   |...-+..... ++.    +.. +.
T Consensus        58 ~~~~~~~~~~vLDiGc--G~G~~~~~l~~~~~~~v~gvd~s~~~~~~a~~~~~~~~~~~~~~~~~~-d~~----~~~-~~  129 (287)
T 1kpg_A           58 GKLGLQPGMTLLDVGC--GWGATMMRAVEKYDVNVVGLTLSKNQANHVQQLVANSENLRSKRVLLA-GWE----QFD-EP  129 (287)
T ss_dssp             TTTTCCTTCEEEEETC--TTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHTCCCCSCEEEEES-CGG----GCC-CC
T ss_pred             HHcCCCCcCEEEEECC--cccHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCCCCCeEEEEC-Chh----hCC-CC
Confidence            4456788999999984  4588888999888999999999999888777432   32211111111 221    111 46


Q ss_pred             ccEEEeC-----CC----chhHHHHHHhhccCCEEEEEecc
Q 028523           89 INIYFEN-----VG----GKMLDAVLLNMRIQGRITLCGMI  120 (208)
Q Consensus        89 ~d~v~d~-----~g----~~~~~~~~~~l~~~G~~v~~g~~  120 (208)
                      +|+|+..     .+    ...+..+.+.|+|||+++.....
T Consensus       130 fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~  170 (287)
T 1kpg_A          130 VDRIVSIGAFEHFGHERYDAFFSLAHRLLPADGVMLLHTIT  170 (287)
T ss_dssp             CSEEEEESCGGGTCTTTHHHHHHHHHHHSCTTCEEEEEEEE
T ss_pred             eeEEEEeCchhhcChHHHHHHHHHHHHhcCCCCEEEEEEec
Confidence            9999864     22    23578889999999999876543

>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}

Probab=97.49  E-value=0.00036  Score=53.87  Aligned_cols=74  Identities=12%  Similarity=0.108  Sum_probs=50.2

Q ss_pred             CCEEEEecCCchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHhcCCCe-eEecC-CCccHHHHHHhHCCCCccEEEeC
Q 028523           19 GEYVFVSAASGAVGQLVGQFAKLV-GCYVVGSAGSKDKVDLLKNKFGFDE-AFNYK-EEPDLDAALKRYFPEGINIYFEN   95 (208)
Q Consensus        19 g~~vli~ga~g~vG~~a~qla~~~-g~~v~~~~~s~~~~~~~~~~~g~~~-v~~~~-~~~~~~~~~~~~~~~~~d~v~d~   95 (208)
                      +.+|||+||+|.+|...++.+... |.+|++++++.++...+.+.-+... ..|.. +...+.+.+.     ++|+||.+
T Consensus        24 ~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~~d~~~~~~~~~-----~~d~Vih~   98 (372)
T 3slg_A           24 AKKVLILGVNGFIGHHLSKRILETTDWEVFGMDMQTDRLGDLVKHERMHFFEGDITINKEWVEYHVK-----KCDVILPL   98 (372)
T ss_dssp             CCEEEEESCSSHHHHHHHHHHHHHSSCEEEEEESCCTTTGGGGGSTTEEEEECCTTTCHHHHHHHHH-----HCSEEEEC
T ss_pred             CCEEEEECCCChHHHHHHHHHHhCCCCEEEEEeCChhhhhhhccCCCeEEEeCccCCCHHHHHHHhc-----cCCEEEEc
Confidence            578999999999999999888777 8999999998776554431122221 23444 3212222232     48999998


Q ss_pred             CC
Q 028523           96 VG   97 (208)
Q Consensus        96 ~g   97 (208)
                      .+
T Consensus        99 A~  100 (372)
T 3slg_A           99 VA  100 (372)
T ss_dssp             BC
T ss_pred             Cc
Confidence            77

>2g76_A 3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, phosphoglycerate dehydrogenase deficiency, S metabolism, 2-hydroxyacid dehydrogenases; HET: NAD; 1.70A {Homo sapiens}

Probab=97.49  E-value=0.00061  Score=52.03  Aligned_cols=89  Identities=15%  Similarity=0.175  Sum_probs=66.5

Q ss_pred             CCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHHHHhHCCCCccEEEeCC
Q 028523           17 KQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENV   96 (208)
Q Consensus        17 ~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~d~v~d~~   96 (208)
                      -.|.+|.|.| .|.+|...++.++..|.+|++.+++.++ +.+. ++|+..    .   ++.+.+.     ..|+|+.++
T Consensus       163 l~g~tvgIIG-lG~IG~~vA~~l~~~G~~V~~~d~~~~~-~~~~-~~g~~~----~---~l~ell~-----~aDvV~l~~  227 (335)
T 2g76_A          163 LNGKTLGILG-LGRIGREVATRMQSFGMKTIGYDPIISP-EVSA-SFGVQQ----L---PLEEIWP-----LCDFITVHT  227 (335)
T ss_dssp             CTTCEEEEEC-CSHHHHHHHHHHHTTTCEEEEECSSSCH-HHHH-HTTCEE----C---CHHHHGG-----GCSEEEECC
T ss_pred             CCcCEEEEEe-ECHHHHHHHHHHHHCCCEEEEECCCcch-hhhh-hcCcee----C---CHHHHHh-----cCCEEEEec
Confidence            4678999999 5999999999999999999999987665 3455 677632    1   3433333     379999988


Q ss_pred             Cc-h----hH-HHHHHhhccCCEEEEEecc
Q 028523           97 GG-K----ML-DAVLLNMRIQGRITLCGMI  120 (208)
Q Consensus        97 g~-~----~~-~~~~~~l~~~G~~v~~g~~  120 (208)
                      +. +    .+ ...+..|++++.++.++..
T Consensus       228 P~t~~t~~li~~~~l~~mk~gailIN~arg  257 (335)
T 2g76_A          228 PLLPSTTGLLNDNTFAQCKKGVRVVNCARG  257 (335)
T ss_dssp             CCCTTTTTSBCHHHHTTSCTTEEEEECSCT
T ss_pred             CCCHHHHHhhCHHHHhhCCCCcEEEECCCc
Confidence            73 2    12 4678889999999988763

>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae}

Probab=97.48  E-value=0.00085  Score=53.60  Aligned_cols=94  Identities=15%  Similarity=0.151  Sum_probs=61.7

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHhcCCCe-eEecCCCccHHHHHHhHCCCCccEEEeC
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLV-GCYVVGSAGSKDKVDLLKNKFGFDE-AFNYKEEPDLDAALKRYFPEGINIYFEN   95 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~-g~~v~~~~~s~~~~~~~~~~~g~~~-v~~~~~~~~~~~~~~~~~~~~~d~v~d~   95 (208)
                      ++.+|+|+|+ |++|..++..+... +.+|++++++.++.+.+.+..+... .+|..+.+++.+.+.     ++|+|++|
T Consensus        22 ~~k~VlIiGA-GgiG~aia~~L~~~~g~~V~v~~R~~~ka~~la~~~~~~~~~~D~~d~~~l~~~l~-----~~DvVIn~   95 (467)
T 2axq_A           22 MGKNVLLLGS-GFVAQPVIDTLAANDDINVTVACRTLANAQALAKPSGSKAISLDVTDDSALDKVLA-----DNDVVISL   95 (467)
T ss_dssp             -CEEEEEECC-STTHHHHHHHHHTSTTEEEEEEESSHHHHHHHHGGGTCEEEECCTTCHHHHHHHHH-----TSSEEEEC
T ss_pred             CCCEEEEECC-hHHHHHHHHHHHhCCCCeEEEEECCHHHHHHHHHhcCCcEEEEecCCHHHHHHHHc-----CCCEEEEC
Confidence            4578999997 99999998888777 6799999999888776653334322 234332212222222     58999999


Q ss_pred             CCch-hHHHHHHhhccCCEEEEE
Q 028523           96 VGGK-MLDAVLLNMRIQGRITLC  117 (208)
Q Consensus        96 ~g~~-~~~~~~~~l~~~G~~v~~  117 (208)
                      ++.. .......++.++-.++..
T Consensus        96 tp~~~~~~v~~a~l~~g~~vvd~  118 (467)
T 2axq_A           96 IPYTFHPNVVKSAIRTKTDVVTS  118 (467)
T ss_dssp             SCGGGHHHHHHHHHHHTCEEEEC
T ss_pred             CchhhhHHHHHHHHhcCCEEEEe
Confidence            9953 223344566777777654

>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*

Probab=97.47  E-value=0.001  Score=49.54  Aligned_cols=70  Identities=10%  Similarity=0.056  Sum_probs=52.5

Q ss_pred             CCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHhcCC---CeeEecCCCccHHHHHHhHCCCCccEE
Q 028523           17 KQGEYVFVSAASGAVGQLVGQFAKLVGC-YVVGSAGSKDKVDLLKNKFGF---DEAFNYKEEPDLDAALKRYFPEGINIY   92 (208)
Q Consensus        17 ~~g~~vli~ga~g~vG~~a~qla~~~g~-~v~~~~~s~~~~~~~~~~~g~---~~v~~~~~~~~~~~~~~~~~~~~~d~v   92 (208)
                      -.+.+++|+|+ |++|.+++..+...|+ +|++..|+.++.+.+.++++.   ..+.++.+.          . ..+|+|
T Consensus       124 l~~k~vlvlGa-Gg~g~aia~~L~~~G~~~v~v~~R~~~~a~~la~~~~~~~~~~~~~~~~l----------~-~~aDiI  191 (281)
T 3o8q_A          124 LKGATILLIGA-GGAARGVLKPLLDQQPASITVTNRTFAKAEQLAELVAAYGEVKAQAFEQL----------K-QSYDVI  191 (281)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHTTCCSEEEEEESSHHHHHHHHHHHGGGSCEEEEEGGGC----------C-SCEEEE
T ss_pred             ccCCEEEEECc-hHHHHHHHHHHHhcCCCeEEEEECCHHHHHHHHHHhhccCCeeEeeHHHh----------c-CCCCEE
Confidence            36889999996 8999999988888997 999999999887776656653   123333221          1 359999


Q ss_pred             EeCCCc
Q 028523           93 FENVGG   98 (208)
Q Consensus        93 ~d~~g~   98 (208)
                      |+|++.
T Consensus       192 InaTp~  197 (281)
T 3o8q_A          192 INSTSA  197 (281)
T ss_dssp             EECSCC
T ss_pred             EEcCcC
Confidence            999974

>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}

Probab=97.47  E-value=0.00063  Score=52.66  Aligned_cols=91  Identities=11%  Similarity=0.112  Sum_probs=63.3

Q ss_pred             EEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHHHHhHCCCCccEEEeCCCch-
Q 028523           21 YVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVGGK-   99 (208)
Q Consensus        21 ~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~d~v~d~~g~~-   99 (208)
                      +|+|+|+ |.+|..+++.+.. ..+|.+.+++.++.+.++ +......+|..+.    +.+.+... +.|+|++|++.. 
T Consensus        18 kilvlGa-G~vG~~~~~~L~~-~~~v~~~~~~~~~~~~~~-~~~~~~~~d~~d~----~~l~~~~~-~~DvVi~~~p~~~   89 (365)
T 3abi_A           18 KVLILGA-GNIGRAIAWDLKD-EFDVYIGDVNNENLEKVK-EFATPLKVDASNF----DKLVEVMK-EFELVIGALPGFL   89 (365)
T ss_dssp             EEEEECC-SHHHHHHHHHHTT-TSEEEEEESCHHHHHHHT-TTSEEEECCTTCH----HHHHHHHT-TCSEEEECCCGGG
T ss_pred             EEEEECC-CHHHHHHHHHHhc-CCCeEEEEcCHHHHHHHh-ccCCcEEEecCCH----HHHHHHHh-CCCEEEEecCCcc
Confidence            6999997 9999988877643 468999999998888876 4432233454433    22333222 489999999954 


Q ss_pred             hHHHHHHhhccCCEEEEEec
Q 028523          100 MLDAVLLNMRIQGRITLCGM  119 (208)
Q Consensus       100 ~~~~~~~~l~~~G~~v~~g~  119 (208)
                      ....+-.|+..+-+++.+..
T Consensus        90 ~~~v~~~~~~~g~~yvD~s~  109 (365)
T 3abi_A           90 GFKSIKAAIKSKVDMVDVSF  109 (365)
T ss_dssp             HHHHHHHHHHHTCEEEECCC
T ss_pred             cchHHHHHHhcCcceEeeec
Confidence            44556667788888988754

>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A

Probab=97.47  E-value=0.0005  Score=51.42  Aligned_cols=73  Identities=18%  Similarity=0.106  Sum_probs=50.3

Q ss_pred             CCEEEEecCCchHHHHHHHHHHHcC-CEEEEEeCCHHHH--HHHHHhcCCCe-eEecCCCccHHHHHHhHCCCCccEEEe
Q 028523           19 GEYVFVSAASGAVGQLVGQFAKLVG-CYVVGSAGSKDKV--DLLKNKFGFDE-AFNYKEEPDLDAALKRYFPEGINIYFE   94 (208)
Q Consensus        19 g~~vli~ga~g~vG~~a~qla~~~g-~~v~~~~~s~~~~--~~~~~~~g~~~-v~~~~~~~~~~~~~~~~~~~~~d~v~d   94 (208)
                      ..+|+|+||+|.+|...++.+...| .+|+++++++++.  +.+. ..+... ..|..+.    +.+.+... ++|.||.
T Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~R~~~~~~~~~l~-~~~~~~~~~D~~d~----~~l~~~~~-~~d~vi~   78 (299)
T 2wm3_A            5 KKLVVVFGGTGAQGGSVARTLLEDGTFKVRVVTRNPRKKAAKELR-LQGAEVVQGDQDDQ----VIMELALN-GAYATFI   78 (299)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCSSEEEEEESCTTSHHHHHHH-HTTCEEEECCTTCH----HHHHHHHT-TCSEEEE
T ss_pred             CCEEEEECCCchHHHHHHHHHHhcCCceEEEEEcCCCCHHHHHHH-HCCCEEEEecCCCH----HHHHHHHh-cCCEEEE
Confidence            4689999999999999998888778 8999999887653  2333 345432 2344432    22222222 5999999


Q ss_pred             CCC
Q 028523           95 NVG   97 (208)
Q Consensus        95 ~~g   97 (208)
                      +.+
T Consensus        79 ~a~   81 (299)
T 2wm3_A           79 VTN   81 (299)
T ss_dssp             CCC
T ss_pred             eCC
Confidence            987

>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*

Probab=97.47  E-value=0.0027  Score=49.95  Aligned_cols=96  Identities=17%  Similarity=0.234  Sum_probs=68.4

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeE-ecCCCccHHHHHHhHCCCCccEEEeCC
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAF-NYKEEPDLDAALKRYFPEGINIYFENV   96 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~v~-~~~~~~~~~~~~~~~~~~~~d~v~d~~   96 (208)
                      .+++|+|.|. |.+|+.+++.++..|.+|++++.++++.+.++ +.|...++ |..+    .+.+++..-..+|+++-++
T Consensus         3 ~~~~viIiG~-Gr~G~~va~~L~~~g~~vvvId~d~~~v~~~~-~~g~~vi~GDat~----~~~L~~agi~~A~~viv~~   76 (413)
T 3l9w_A            3 HGMRVIIAGF-GRFGQITGRLLLSSGVKMVVLDHDPDHIETLR-KFGMKVFYGDATR----MDLLESAGAAKAEVLINAI   76 (413)
T ss_dssp             -CCSEEEECC-SHHHHHHHHHHHHTTCCEEEEECCHHHHHHHH-HTTCCCEESCTTC----HHHHHHTTTTTCSEEEECC
T ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCEEEEECCHHHHHHHH-hCCCeEEEcCCCC----HHHHHhcCCCccCEEEECC
Confidence            3467999995 99999999999999999999999999999998 78875443 2222    2234443223799999999


Q ss_pred             Cchh----HHHHHHhhccCCEEEEEec
Q 028523           97 GGKM----LDAVLLNMRIQGRITLCGM  119 (208)
Q Consensus        97 g~~~----~~~~~~~l~~~G~~v~~g~  119 (208)
                      +.+.    .....+.+.+..+++.-..
T Consensus        77 ~~~~~n~~i~~~ar~~~p~~~Iiara~  103 (413)
T 3l9w_A           77 DDPQTNLQLTEMVKEHFPHLQIIARAR  103 (413)
T ss_dssp             SSHHHHHHHHHHHHHHCTTCEEEEEES
T ss_pred             CChHHHHHHHHHHHHhCCCCeEEEEEC
Confidence            8642    2344455666667766543

>1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A*

Probab=97.46  E-value=0.00025  Score=54.50  Aligned_cols=77  Identities=19%  Similarity=0.275  Sum_probs=50.8

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhc--CC-Cee--EecCCCccHHHHHHhHCCCCccEE
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKF--GF-DEA--FNYKEEPDLDAALKRYFPEGINIY   92 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~--g~-~~v--~~~~~~~~~~~~~~~~~~~~~d~v   92 (208)
                      .+.+|||+||+|.+|...++.+...|.+|+++++++++.+.+.+.+  +. ...  .|..+...+.+.+...   ++|+|
T Consensus         8 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~---~~d~v   84 (357)
T 1rkx_A            8 QGKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETARVADGMQSEIGDIRDQNKLLESIREF---QPEIV   84 (357)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCSSSSCHHHHTTTTTTSEEEECCTTCHHHHHHHHHHH---CCSEE
T ss_pred             CCCEEEEECCCchHHHHHHHHHHhCCCeEEEEeCCCcccchhhHhhccCCceEEEEccccCHHHHHHHHHhc---CCCEE
Confidence            3578999999999999999988888999999998866543332122  11 122  3333321233333322   58999


Q ss_pred             EeCCC
Q 028523           93 FENVG   97 (208)
Q Consensus        93 ~d~~g   97 (208)
                      |.+.+
T Consensus        85 ih~A~   89 (357)
T 1rkx_A           85 FHMAA   89 (357)
T ss_dssp             EECCS
T ss_pred             EECCC
Confidence            99987

>2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus}

Probab=97.46  E-value=0.00053  Score=51.78  Aligned_cols=74  Identities=8%  Similarity=0.162  Sum_probs=48.1

Q ss_pred             CCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCe-eEecCCCccHHHHHHhHCCCCccEEEe
Q 028523           16 PKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDE-AFNYKEEPDLDAALKRYFPEGINIYFE   94 (208)
Q Consensus        16 ~~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~-v~~~~~~~~~~~~~~~~~~~~~d~v~d   94 (208)
                      -++-.+|||+||+|.+|...++.+...|.+|++++++++. +    .++... ..|..+...+.+.+..   +++|+||.
T Consensus         9 ~~~~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~-~----~l~~~~~~~Dl~d~~~~~~~~~~---~~~d~vih   80 (321)
T 2pk3_A            9 HHGSMRALITGVAGFVGKYLANHLTEQNVEVFGTSRNNEA-K----LPNVEMISLDIMDSQRVKKVISD---IKPDYIFH   80 (321)
T ss_dssp             ----CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCTTC-C----CTTEEEEECCTTCHHHHHHHHHH---HCCSEEEE
T ss_pred             ccCcceEEEECCCChHHHHHHHHHHHCCCEEEEEecCCcc-c----cceeeEEECCCCCHHHHHHHHHh---cCCCEEEE
Confidence            3566789999999999999999888889999999987654 2    122211 2233332123223322   25899999


Q ss_pred             CCC
Q 028523           95 NVG   97 (208)
Q Consensus        95 ~~g   97 (208)
                      +.+
T Consensus        81 ~A~   83 (321)
T 2pk3_A           81 LAA   83 (321)
T ss_dssp             CCS
T ss_pred             cCc
Confidence            987

>1c1d_A L-phenylalanine dehydrogenase; amino acid dehydrogenase, oxidative deamination mechanism, oxidoreductase; HET: PHE NAD; 1.25A {Rhodococcus SP} SCOP: c.2.1.7 c.58.1.1 PDB: 1bw9_A* 1c1x_A* 1bw9_B* 1c1d_B* 1c1x_B* 1bxg_B* 1bxg_A*

Probab=97.45  E-value=0.0019  Score=49.60  Aligned_cols=95  Identities=15%  Similarity=0.179  Sum_probs=60.9

Q ss_pred             CCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCee------------EecCCCcc-H-HHHHH
Q 028523           17 KQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEA------------FNYKEEPD-L-DAALK   82 (208)
Q Consensus        17 ~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~v------------~~~~~~~~-~-~~~~~   82 (208)
                      -+|++|.|.| .|.||+.+++.++.+|++|++++.++++.++.+ ++|+..+            +.+....+ + .+.+.
T Consensus       173 L~GktV~I~G-~GnVG~~~A~~l~~~GakVvvsD~~~~~~~~a~-~~ga~~v~~~ell~~~~DIliP~A~~~~I~~~~~~  250 (355)
T 1c1d_A          173 LDGLTVLVQG-LGAVGGSLASLAAEAGAQLLVADTDTERVAHAV-ALGHTAVALEDVLSTPCDVFAPCAMGGVITTEVAR  250 (355)
T ss_dssp             STTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHH-HTTCEECCGGGGGGCCCSEEEECSCSCCBCHHHHH
T ss_pred             CCCCEEEEEC-cCHHHHHHHHHHHHCCCEEEEEeCCccHHHHHH-hcCCEEeChHHhhcCccceecHhHHHhhcCHHHHh
Confidence            5789999998 599999999999999999998887776645555 6775322            10100000 0 01111


Q ss_pred             hHCCCCccEEEeCCCchhH-HHHHHhhccCCEEEE
Q 028523           83 RYFPEGINIYFENVGGKML-DAVLLNMRIQGRITL  116 (208)
Q Consensus        83 ~~~~~~~d~v~d~~g~~~~-~~~~~~l~~~G~~v~  116 (208)
                      .+   +.++|+++..++.. +.+.+.|..+|.++.
T Consensus       251 ~l---k~~iVie~AN~p~t~~eA~~~L~~~gIlv~  282 (355)
T 1c1d_A          251 TL---DCSVVAGAANNVIADEAASDILHARGILYA  282 (355)
T ss_dssp             HC---CCSEECCSCTTCBCSHHHHHHHHHTTCEEC
T ss_pred             hC---CCCEEEECCCCCCCCHHHHHHHHhCCEEEE
Confidence            11   36777777765543 366677777776654

>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}

Probab=97.44  E-value=0.0014  Score=48.55  Aligned_cols=89  Identities=12%  Similarity=0.016  Sum_probs=60.9

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHhcCC--CeeEecCCCccHHHHHHhHCCCCccEEEe
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGC-YVVGSAGSKDKVDLLKNKFGF--DEAFNYKEEPDLDAALKRYFPEGINIYFE   94 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~-~v~~~~~s~~~~~~~~~~~g~--~~v~~~~~~~~~~~~~~~~~~~~~d~v~d   94 (208)
                      .+.+++|+|+ |++|.+++..+...|+ +|+++.|+.++.+.+.++++.  ..++++.   ++.       ...+|+||+
T Consensus       119 ~~k~~lvlGa-Gg~~~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~~~~~~~~~~---~l~-------~~~~DivIn  187 (272)
T 3pwz_A          119 RNRRVLLLGA-GGAVRGALLPFLQAGPSELVIANRDMAKALALRNELDHSRLRISRYE---ALE-------GQSFDIVVN  187 (272)
T ss_dssp             TTSEEEEECC-SHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHCCTTEEEECSG---GGT-------TCCCSEEEE
T ss_pred             cCCEEEEECc-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhccCCeeEeeHH---Hhc-------ccCCCEEEE
Confidence            6889999996 8999999988888997 999999999988777656664  1233222   111       135999999


Q ss_pred             CCCchhHH----HHHHhhccCCEEEEE
Q 028523           95 NVGGKMLD----AVLLNMRIQGRITLC  117 (208)
Q Consensus        95 ~~g~~~~~----~~~~~l~~~G~~v~~  117 (208)
                      |++.....    .-...++++..++.+
T Consensus       188 aTp~gm~~~~~~i~~~~l~~~~~V~Dl  214 (272)
T 3pwz_A          188 ATSASLTADLPPLPADVLGEAALAYEL  214 (272)
T ss_dssp             CSSGGGGTCCCCCCGGGGTTCSEEEES
T ss_pred             CCCCCCCCCCCCCCHHHhCcCCEEEEe
Confidence            98742210    012456666666554

>3cea_A MYO-inositol 2-dehydrogenase; NP_786804.1, oxidoreductase FA NAD-binding rossmann fold, structural genomics; HET: NAD; 2.40A {Lactobacillus plantarum WCFS1}

Probab=97.44  E-value=0.017  Score=44.14  Aligned_cols=87  Identities=14%  Similarity=0.221  Sum_probs=59.6

Q ss_pred             CEEEEecCCchHHHHHHHHHH-Hc-CCEEE-EEeCCHHHHHHHHHhcCCCeeEecCCCccHHHHHHhHCCCCccEEEeCC
Q 028523           20 EYVFVSAASGAVGQLVGQFAK-LV-GCYVV-GSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENV   96 (208)
Q Consensus        20 ~~vli~ga~g~vG~~a~qla~-~~-g~~v~-~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~d~v~d~~   96 (208)
                      -+|.|.|+ |.+|...++.++ .. +++++ +.++++++.+.+.+++|.+.+++     ++.+.+.   ...+|+|+.|+
T Consensus         9 ~~v~iiG~-G~ig~~~~~~l~~~~~~~~~vav~d~~~~~~~~~a~~~g~~~~~~-----~~~~~l~---~~~~D~V~i~t   79 (346)
T 3cea_A            9 LRAAIIGL-GRLGERHARHLVNKIQGVKLVAACALDSNQLEWAKNELGVETTYT-----NYKDMID---TENIDAIFIVA   79 (346)
T ss_dssp             EEEEEECC-STTHHHHHHHHHHTCSSEEEEEEECSCHHHHHHHHHTTCCSEEES-----CHHHHHT---TSCCSEEEECS
T ss_pred             ceEEEEcC-CHHHHHHHHHHHhcCCCcEEEEEecCCHHHHHHHHHHhCCCcccC-----CHHHHhc---CCCCCEEEEeC
Confidence            47899995 999998888776 43 67765 45667777766554788755442     4444332   22699999999


Q ss_pred             Cc-hhHHHHHHhhccCCEEE
Q 028523           97 GG-KMLDAVLLNMRIQGRIT  115 (208)
Q Consensus        97 g~-~~~~~~~~~l~~~G~~v  115 (208)
                      +. ...+.+..+|+.|-.++
T Consensus        80 p~~~h~~~~~~al~~G~~v~   99 (346)
T 3cea_A           80 PTPFHPEMTIYAMNAGLNVF   99 (346)
T ss_dssp             CGGGHHHHHHHHHHTTCEEE
T ss_pred             ChHhHHHHHHHHHHCCCEEE
Confidence            95 56777778888765544

>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*

Probab=97.44  E-value=0.00014  Score=55.30  Aligned_cols=77  Identities=6%  Similarity=-0.018  Sum_probs=49.7

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCe--eEecCCCccHHHHHHhHCCCCccEEEeC
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDE--AFNYKEEPDLDAALKRYFPEGINIYFEN   95 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~--v~~~~~~~~~~~~~~~~~~~~~d~v~d~   95 (208)
                      .+.+|||+||+|.+|...++.+...|++|++++++......+.+.+....  ..|..+...+.+.+.+.   ++|+||++
T Consensus        19 ~~~~vlVTGasG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~l~~v~~~~~Dl~d~~~~~~~~~~~---~~D~vih~   95 (330)
T 2pzm_A           19 SHMRILITGGAGCLGSNLIEHWLPQGHEILVIDNFATGKREVLPPVAGLSVIEGSVTDAGLLERAFDSF---KPTHVVHS   95 (330)
T ss_dssp             TCCEEEEETTTSHHHHHHHHHHGGGTCEEEEEECCSSSCGGGSCSCTTEEEEECCTTCHHHHHHHHHHH---CCSEEEEC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCccchhhhhccCCceEEEeeCCCHHHHHHHHhhc---CCCEEEEC
Confidence            46789999999999999999888889999999986443211111221112  22333331233333322   59999999


Q ss_pred             CC
Q 028523           96 VG   97 (208)
Q Consensus        96 ~g   97 (208)
                      .+
T Consensus        96 A~   97 (330)
T 2pzm_A           96 AA   97 (330)
T ss_dssp             CC
T ss_pred             Cc
Confidence            87

>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*

Probab=97.43  E-value=0.00083  Score=49.23  Aligned_cols=96  Identities=19%  Similarity=0.194  Sum_probs=65.4

Q ss_pred             CCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHh---cCCCeeEecCCCccHHHHHHhHCCCCccEE
Q 028523           16 PKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNK---FGFDEAFNYKEEPDLDAALKRYFPEGINIY   92 (208)
Q Consensus        16 ~~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~---~g~~~v~~~~~~~~~~~~~~~~~~~~~d~v   92 (208)
                      ++++++||-.|+ |. |..++.+++ .|++|++++.++...+.+++.   .+..  +..... ++.+.   ...+.+|+|
T Consensus       118 ~~~~~~VLDiGc-G~-G~l~~~la~-~g~~v~gvDi~~~~v~~a~~n~~~~~~~--v~~~~~-d~~~~---~~~~~fD~V  188 (254)
T 2nxc_A          118 LRPGDKVLDLGT-GS-GVLAIAAEK-LGGKALGVDIDPMVLPQAEANAKRNGVR--PRFLEG-SLEAA---LPFGPFDLL  188 (254)
T ss_dssp             CCTTCEEEEETC-TT-SHHHHHHHH-TTCEEEEEESCGGGHHHHHHHHHHTTCC--CEEEES-CHHHH---GGGCCEEEE
T ss_pred             cCCCCEEEEecC-CC-cHHHHHHHH-hCCeEEEEECCHHHHHHHHHHHHHcCCc--EEEEEC-Chhhc---CcCCCCCEE
Confidence            678999999984 33 777777666 567999999999887777642   2332  222222 44432   223479999


Q ss_pred             EeCCCc----hhHHHHHHhhccCCEEEEEecc
Q 028523           93 FENVGG----KMLDAVLLNMRIQGRITLCGMI  120 (208)
Q Consensus        93 ~d~~g~----~~~~~~~~~l~~~G~~v~~g~~  120 (208)
                      +.....    ..+..+.+.|+|+|+++..+..
T Consensus       189 v~n~~~~~~~~~l~~~~~~LkpgG~lils~~~  220 (254)
T 2nxc_A          189 VANLYAELHAALAPRYREALVPGGRALLTGIL  220 (254)
T ss_dssp             EEECCHHHHHHHHHHHHHHEEEEEEEEEEEEE
T ss_pred             EECCcHHHHHHHHHHHHHHcCCCCEEEEEeec
Confidence            976532    3567788899999999987653

>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}

Probab=97.43  E-value=0.00068  Score=51.21  Aligned_cols=92  Identities=11%  Similarity=0.102  Sum_probs=58.0

Q ss_pred             CCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCH------HHHHHHHH--hcCCCe-eEecCCCccHHHHHHhHCCCCc
Q 028523           19 GEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSK------DKVDLLKN--KFGFDE-AFNYKEEPDLDAALKRYFPEGI   89 (208)
Q Consensus        19 g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~------~~~~~~~~--~~g~~~-v~~~~~~~~~~~~~~~~~~~~~   89 (208)
                      ..+|+|+||+|.+|...++.+...|.+|++++|++      ++.+.+.+  .-+... ..|..+.    +.+.+... ++
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~l~~~~~~~v~~v~~D~~d~----~~l~~a~~-~~   78 (321)
T 3c1o_A            4 MEKIIIYGGTGYIGKFMVRASLSFSHPTFIYARPLTPDSTPSSVQLREEFRSMGVTIIEGEMEEH----EKMVSVLK-QV   78 (321)
T ss_dssp             CCCEEEETTTSTTHHHHHHHHHHTTCCEEEEECCCCTTCCHHHHHHHHHHHHTTCEEEECCTTCH----HHHHHHHT-TC
T ss_pred             ccEEEEEcCCchhHHHHHHHHHhCCCcEEEEECCcccccChHHHHHHHHhhcCCcEEEEecCCCH----HHHHHHHc-CC
Confidence            35699999999999999998888899999999875      33333320  234432 2344433    22333222 49


Q ss_pred             cEEEeCCCch---hHHHHHHhhcc-C--CEEE
Q 028523           90 NIYFENVGGK---MLDAVLLNMRI-Q--GRIT  115 (208)
Q Consensus        90 d~v~d~~g~~---~~~~~~~~l~~-~--G~~v  115 (208)
                      |.||.+.+..   .....++.+.. +  ++++
T Consensus        79 d~vi~~a~~~~~~~~~~l~~aa~~~g~v~~~v  110 (321)
T 3c1o_A           79 DIVISALPFPMISSQIHIINAIKAAGNIKRFL  110 (321)
T ss_dssp             SEEEECCCGGGSGGGHHHHHHHHHHCCCCEEE
T ss_pred             CEEEECCCccchhhHHHHHHHHHHhCCccEEe
Confidence            9999998842   33444554444 3  4776

>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}

Probab=97.43  E-value=0.00097  Score=52.35  Aligned_cols=95  Identities=13%  Similarity=0.041  Sum_probs=64.4

Q ss_pred             EEEEecCCchHHHHHHHHHHHcC---CEEEEEeCCHHHHHHHHHhcCC-----Ce--eEecCCCccHHHHHHhHCCCCcc
Q 028523           21 YVFVSAASGAVGQLVGQFAKLVG---CYVVGSAGSKDKVDLLKNKFGF-----DE--AFNYKEEPDLDAALKRYFPEGIN   90 (208)
Q Consensus        21 ~vli~ga~g~vG~~a~qla~~~g---~~v~~~~~s~~~~~~~~~~~g~-----~~--v~~~~~~~~~~~~~~~~~~~~~d   90 (208)
                      +|+|+|+ |++|..+++.+...|   .+|++.+++.++.+.+.++++.     ..  .+|..+.+++.+.+.+.   ++|
T Consensus         3 kVlIiGa-GgiG~~ia~~L~~~g~~~~~V~v~~r~~~~~~~la~~l~~~~~~~~~~~~~D~~d~~~l~~~l~~~---~~D   78 (405)
T 4ina_A            3 KVLQIGA-GGVGGVVAHKMAMNREVFSHITLASRTLSKCQEIAQSIKAKGYGEIDITTVDADSIEELVALINEV---KPQ   78 (405)
T ss_dssp             EEEEECC-SHHHHHHHHHHHTCTTTCCEEEEEESCHHHHHHHHHHHHHTTCCCCEEEECCTTCHHHHHHHHHHH---CCS
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCCceEEEEEECCHHHHHHHHHHhhhhcCCceEEEEecCCCHHHHHHHHHhh---CCC
Confidence            6899998 999999998887777   4899999999987776545531     11  23443322344444432   589


Q ss_pred             EEEeCCCc-hhHHHHHHhhccCCEEEEEec
Q 028523           91 IYFENVGG-KMLDAVLLNMRIQGRITLCGM  119 (208)
Q Consensus        91 ~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~  119 (208)
                      +|+++++. ........++..+-.++.+..
T Consensus        79 vVin~ag~~~~~~v~~a~l~~g~~vvD~a~  108 (405)
T 4ina_A           79 IVLNIALPYQDLTIMEACLRTGVPYLDTAN  108 (405)
T ss_dssp             EEEECSCGGGHHHHHHHHHHHTCCEEESSC
T ss_pred             EEEECCCcccChHHHHHHHHhCCCEEEecC
Confidence            99999984 344455567777777776533

>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1

Probab=97.43  E-value=0.0005  Score=52.14  Aligned_cols=103  Identities=18%  Similarity=0.258  Sum_probs=68.5

Q ss_pred             HHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcC--CEEEEEeCCHHHHHHHHHh---cCCCeeEecCCCccHHHHHHhH
Q 028523           10 FFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVG--CYVVGSAGSKDKVDLLKNK---FGFDEAFNYKEEPDLDAALKRY   84 (208)
Q Consensus        10 l~~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g--~~v~~~~~s~~~~~~~~~~---~g~~~v~~~~~~~~~~~~~~~~   84 (208)
                      +.....++++++||-.|+ |. |..+..+++..+  .+|++++.+++..+.+++.   .|...+ ..... +..+...  
T Consensus        67 l~~~l~~~~~~~VLDiGc-G~-G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~g~~~v-~~~~~-d~~~~~~--  140 (317)
T 1dl5_A           67 FMEWVGLDKGMRVLEIGG-GT-GYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERLGIENV-IFVCG-DGYYGVP--  140 (317)
T ss_dssp             HHHHTTCCTTCEEEEECC-TT-SHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHTTCCSE-EEEES-CGGGCCG--
T ss_pred             HHHhcCCCCcCEEEEecC-Cc-hHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHHcCCCCe-EEEEC-Chhhccc--
Confidence            345567889999999984 43 888888888754  4799999999988777643   344321 11111 2211111  


Q ss_pred             CCCCccEEEeCCCc-hhHHHHHHhhccCCEEEEEe
Q 028523           85 FPEGINIYFENVGG-KMLDAVLLNMRIQGRITLCG  118 (208)
Q Consensus        85 ~~~~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g  118 (208)
                      ..+.+|+|+....- .....+.+.|+|||+++..-
T Consensus       141 ~~~~fD~Iv~~~~~~~~~~~~~~~LkpgG~lvi~~  175 (317)
T 1dl5_A          141 EFSPYDVIFVTVGVDEVPETWFTQLKEGGRVIVPI  175 (317)
T ss_dssp             GGCCEEEEEECSBBSCCCHHHHHHEEEEEEEEEEB
T ss_pred             cCCCeEEEEEcCCHHHHHHHHHHhcCCCcEEEEEE
Confidence            12369999987663 34467888999999988764

>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*

Probab=97.43  E-value=0.0027  Score=45.00  Aligned_cols=88  Identities=9%  Similarity=0.040  Sum_probs=58.6

Q ss_pred             EEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcC-----CCeeEecCCCccHHHHHHhHCCCCccEEEeC
Q 028523           21 YVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFG-----FDEAFNYKEEPDLDAALKRYFPEGINIYFEN   95 (208)
Q Consensus        21 ~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g-----~~~v~~~~~~~~~~~~~~~~~~~~~d~v~d~   95 (208)
                      +|+|+||+|.+|...++.+...|.+|++.++++++.+.+.+.++     .+  +..  . ++.+.+.     ++|+||.+
T Consensus         2 ~i~iiGa~G~~G~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~--~~~--~-~~~~~~~-----~~D~Vi~~   71 (212)
T 1jay_A            2 RVALLGGTGNLGKGLALRLATLGHEIVVGSRREEKAEAKAAEYRRIAGDAS--ITG--M-KNEDAAE-----ACDIAVLT   71 (212)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTTTCEEEEEESSHHHHHHHHHHHHHHHSSCC--EEE--E-EHHHHHH-----HCSEEEEC
T ss_pred             eEEEEcCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhccccccCC--CCh--h-hHHHHHh-----cCCEEEEe
Confidence            58899978999999888888889999999999888776653444     11  111  1 4444443     38999999


Q ss_pred             CCchhHHHHHHhhc---cCCEEEEEe
Q 028523           96 VGGKMLDAVLLNMR---IQGRITLCG  118 (208)
Q Consensus        96 ~g~~~~~~~~~~l~---~~G~~v~~g  118 (208)
                      +........+..+.   ++..++.+.
T Consensus        72 ~~~~~~~~~~~~l~~~~~~~~vi~~~   97 (212)
T 1jay_A           72 IPWEHAIDTARDLKNILREKIVVSPL   97 (212)
T ss_dssp             SCHHHHHHHHHHTHHHHTTSEEEECC
T ss_pred             CChhhHHHHHHHHHHHcCCCEEEEcC
Confidence            98655444443332   344555544

>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21

Probab=97.42  E-value=0.00027  Score=51.60  Aligned_cols=103  Identities=14%  Similarity=0.103  Sum_probs=68.1

Q ss_pred             HHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHh---cCCCeeEecCCCccHHHHHHhHCC
Q 028523           10 FFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNK---FGFDEAFNYKEEPDLDAALKRYFP   86 (208)
Q Consensus        10 l~~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~---~g~~~v~~~~~~~~~~~~~~~~~~   86 (208)
                      +.....++++.+||-.|+  |.|..+..+++..|.+|++++.+++..+.+++.   .|...-+..... ++.+.  . .+
T Consensus        28 l~~~~~~~~~~~VLDiGc--G~G~~~~~la~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~v~~~~~-d~~~~--~-~~  101 (256)
T 1nkv_A           28 LGRVLRMKPGTRILDLGS--GSGEMLCTWARDHGITGTGIDMSSLFTAQAKRRAEELGVSERVHFIHN-DAAGY--V-AN  101 (256)
T ss_dssp             HHHHTCCCTTCEEEEETC--TTCHHHHHHHHHTCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEES-CCTTC--C-CS
T ss_pred             HHHhcCCCCCCEEEEECC--CCCHHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHhcCCCcceEEEEC-ChHhC--C-cC
Confidence            445567889999999984  448888899988899999999999887777532   343210111111 11110  0 12


Q ss_pred             CCccEEEeCCC-------chhHHHHHHhhccCCEEEEEe
Q 028523           87 EGINIYFENVG-------GKMLDAVLLNMRIQGRITLCG  118 (208)
Q Consensus        87 ~~~d~v~d~~g-------~~~~~~~~~~l~~~G~~v~~g  118 (208)
                      +.||+|+....       ...+..+.+.|+|||+++...
T Consensus       102 ~~fD~V~~~~~~~~~~~~~~~l~~~~r~LkpgG~l~~~~  140 (256)
T 1nkv_A          102 EKCDVAACVGATWIAGGFAGAEELLAQSLKPGGIMLIGE  140 (256)
T ss_dssp             SCEEEEEEESCGGGTSSSHHHHHHHTTSEEEEEEEEEEE
T ss_pred             CCCCEEEECCChHhcCCHHHHHHHHHHHcCCCeEEEEec
Confidence            36999985221       235788889999999988764

>1p9l_A Dihydrodipicolinate reductase; oxidoreductase, lysine biosynthesis, NADH binding specificity, TB structural genomics consortium; HET: NAD PDC PG4; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3 PDB: 1c3v_A* 1yl5_A 1yl7_A* 1yl6_A*

Probab=97.41  E-value=0.0023  Score=46.57  Aligned_cols=76  Identities=17%  Similarity=0.181  Sum_probs=54.8

Q ss_pred             EEEEecCCchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHHHHhHCCCCccEEEeCCC
Q 028523           21 YVFVSAASGAVGQLVGQFAKLV-GCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVG   97 (208)
Q Consensus        21 ~vli~ga~g~vG~~a~qla~~~-g~~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~d~v~d~~g   97 (208)
                      +|.|.|++|.+|...++.+... +.+++......+..+.+. ..+++.++|.+.+....+.+......|.++|+.++|
T Consensus         2 kV~V~Ga~G~mG~~i~~~~~~~~~~elva~~d~~~dl~~~~-~~~~DvvIDfT~p~a~~~~~~~a~~~g~~~VigTTG   78 (245)
T 1p9l_A            2 RVGVLGAKGKVGTTMVRAVAAADDLTLSAELDAGDPLSLLT-DGNTEVVIDFTHPDVVMGNLEFLIDNGIHAVVGTTG   78 (245)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHCTTCEEEEEECTTCCTHHHH-HTTCCEEEECSCTTTHHHHHHHHHHTTCEEEECCCC
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCCEEEEEEccCCCHHHHh-ccCCcEEEEccChHHHHHHHHHHHHcCCCEEEcCCC
Confidence            5889999999999999988765 888887775555555444 346778888887634444444444447889998888

>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*

Probab=97.41  E-value=0.0017  Score=48.00  Aligned_cols=84  Identities=12%  Similarity=0.110  Sum_probs=61.6

Q ss_pred             CCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHHHHhHCCCCccEEEeCCCc
Q 028523           19 GEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVGG   98 (208)
Q Consensus        19 g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~d~v~d~~g~   98 (208)
                      +.+++|+|+ |++|.+++..+...|.+|+++.|+.++.+.+. ++|. .+..+.+. .           .+|+||+|++.
T Consensus       118 ~k~vlvlGa-GGaaraia~~L~~~G~~v~V~nRt~~ka~~la-~~~~-~~~~~~~l-~-----------~~DiVInaTp~  182 (269)
T 3phh_A          118 YQNALILGA-GGSAKALACELKKQGLQVSVLNRSSRGLDFFQ-RLGC-DCFMEPPK-S-----------AFDLIINATSA  182 (269)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCTTHHHHH-HHTC-EEESSCCS-S-----------CCSEEEECCTT
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HCCC-eEecHHHh-c-----------cCCEEEEcccC
Confidence            889999996 99999999999889999999999999988887 7874 33333321 1           48999999872


Q ss_pred             h-----hHH-H-HHHhhccCCEEEEE
Q 028523           99 K-----MLD-A-VLLNMRIQGRITLC  117 (208)
Q Consensus        99 ~-----~~~-~-~~~~l~~~G~~v~~  117 (208)
                      .     .+. . ....++++..++.+
T Consensus       183 Gm~~~~~l~~~~l~~~l~~~~~v~D~  208 (269)
T 3phh_A          183 SLHNELPLNKEVLKGYFKEGKLAYDL  208 (269)
T ss_dssp             CCCCSCSSCHHHHHHHHHHCSEEEES
T ss_pred             CCCCCCCCChHHHHhhCCCCCEEEEe
Confidence            1     222 1 22256777776664

>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}

Probab=97.40  E-value=0.00018  Score=54.83  Aligned_cols=97  Identities=15%  Similarity=0.122  Sum_probs=60.0

Q ss_pred             CEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCe-eEecCCCccHHHHHHhHCCCCccEEEeCCCc
Q 028523           20 EYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDE-AFNYKEEPDLDAALKRYFPEGINIYFENVGG   98 (208)
Q Consensus        20 ~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~-v~~~~~~~~~~~~~~~~~~~~~d~v~d~~g~   98 (208)
                      -+|||+||+|.+|...++.+...|.+|+++++++.+.+.+. ..+... ..|..+.    +.+.+... ++|+||.+.+.
T Consensus        14 M~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~-~~~~~~~~~Dl~d~----~~~~~~~~-~~d~vih~a~~   87 (342)
T 2x4g_A           14 VKYAVLGATGLLGHHAARAIRAAGHDLVLIHRPSSQIQRLA-YLEPECRVAEMLDH----AGLERALR-GLDGVIFSAGY   87 (342)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTCEEEEEECTTSCGGGGG-GGCCEEEECCTTCH----HHHHHHTT-TCSEEEEC---
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCEEEEEecChHhhhhhc-cCCeEEEEecCCCH----HHHHHHHc-CCCEEEECCcc
Confidence            37999999999999999988888999999998876544333 223322 2233332    23333333 59999999872


Q ss_pred             -hh---------------HHHHHHhhcc-C-CEEEEEecccc
Q 028523           99 -KM---------------LDAVLLNMRI-Q-GRITLCGMISQ  122 (208)
Q Consensus        99 -~~---------------~~~~~~~l~~-~-G~~v~~g~~~~  122 (208)
                       ..               ....++.+.+ + ++++.++....
T Consensus        88 ~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~SS~~~  129 (342)
T 2x4g_A           88 YPSRPRRWQEEVASALGQTNPFYAACLQARVPRILYVGSAYA  129 (342)
T ss_dssp             ---------CHHHHHHHHHHHHHHHHHHHTCSCEEEECCGGG
T ss_pred             CcCCCCCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEECCHHh
Confidence             10               1223333333 3 68998886543

>1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2

Probab=97.40  E-value=0.00031  Score=53.41  Aligned_cols=79  Identities=13%  Similarity=0.120  Sum_probs=49.0

Q ss_pred             CCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHH--HHHHHhcC--CC-ee--EecCCCccHHHHHHhHCCC
Q 028523           15 SPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKV--DLLKNKFG--FD-EA--FNYKEEPDLDAALKRYFPE   87 (208)
Q Consensus        15 ~~~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~--~~~~~~~g--~~-~v--~~~~~~~~~~~~~~~~~~~   87 (208)
                      .-.++.+|||+||+|.+|...++.+...|.+|++++++..+.  ..+. .+.  .. .+  .|..+.+.+.+.+...   
T Consensus        10 ~~~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-~~~~~~~~~~~~~Dl~d~~~~~~~~~~~---   85 (335)
T 1rpn_A           10 HGSMTRSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTRWRLR-ELGIEGDIQYEDGDMADACSVQRAVIKA---   85 (335)
T ss_dssp             -----CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCHHHH-HTTCGGGEEEEECCTTCHHHHHHHHHHH---
T ss_pred             ccccCCeEEEECCCChHHHHHHHHHHHCCCeEEEEeCCCccccccchh-hccccCceEEEECCCCCHHHHHHHHHHc---
Confidence            346788999999999999999998888899999999876531  2233 331  11 12  2333321233333322   


Q ss_pred             CccEEEeCCC
Q 028523           88 GINIYFENVG   97 (208)
Q Consensus        88 ~~d~v~d~~g   97 (208)
                      ++|+||.+.+
T Consensus        86 ~~d~Vih~A~   95 (335)
T 1rpn_A           86 QPQEVYNLAA   95 (335)
T ss_dssp             CCSEEEECCS
T ss_pred             CCCEEEECcc
Confidence            5899999987

>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}

Probab=97.40  E-value=0.0038  Score=44.62  Aligned_cols=101  Identities=15%  Similarity=0.102  Sum_probs=67.5

Q ss_pred             CCCCCCEEEEecCCchHHHHHHHHHHHcC------CEEEEEeCCHHHHHHHHHh---cC-----CC--eeEecCCCccHH
Q 028523           15 SPKQGEYVFVSAASGAVGQLVGQFAKLVG------CYVVGSAGSKDKVDLLKNK---FG-----FD--EAFNYKEEPDLD   78 (208)
Q Consensus        15 ~~~~g~~vli~ga~g~vG~~a~qla~~~g------~~v~~~~~s~~~~~~~~~~---~g-----~~--~v~~~~~~~~~~   78 (208)
                      .++++++||-.|+ | .|..+..+++..+      .+|++++.+++..+.+++.   .+     ..  .++..+-...+.
T Consensus        77 ~~~~~~~VLdiG~-G-~G~~~~~la~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~  154 (227)
T 2pbf_A           77 VLKPGSRAIDVGS-G-SGYLTVCMAIKMNVLENKNSYVIGLERVKDLVNFSLENIKRDKPELLKIDNFKIIHKNIYQVNE  154 (227)
T ss_dssp             TSCTTCEEEEESC-T-TSHHHHHHHHHTTTTTCTTCEEEEEESCHHHHHHHHHHHHHHCGGGGSSTTEEEEECCGGGCCH
T ss_pred             hCCCCCEEEEECC-C-CCHHHHHHHHHhcccCCCCCEEEEEeCCHHHHHHHHHHHHHcCccccccCCEEEEECChHhccc
Confidence            5788999999984 4 3888889998876      5999999999887777642   23     21  222211110110


Q ss_pred             HHHHhHCCCCccEEEeCCC-chhHHHHHHhhccCCEEEEEec
Q 028523           79 AALKRYFPEGINIYFENVG-GKMLDAVLLNMRIQGRITLCGM  119 (208)
Q Consensus        79 ~~~~~~~~~~~d~v~d~~g-~~~~~~~~~~l~~~G~~v~~g~  119 (208)
                      ....  ..+.||+|+.... ...+..+.+.|++||+++..-.
T Consensus       155 ~~~~--~~~~fD~I~~~~~~~~~~~~~~~~LkpgG~lv~~~~  194 (227)
T 2pbf_A          155 EEKK--ELGLFDAIHVGASASELPEILVDLLAENGKLIIPIE  194 (227)
T ss_dssp             HHHH--HHCCEEEEEECSBBSSCCHHHHHHEEEEEEEEEEEE
T ss_pred             ccCc--cCCCcCEEEECCchHHHHHHHHHhcCCCcEEEEEEc
Confidence            0001  1236999998776 4567888999999999887644

>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A

Probab=97.37  E-value=0.0024  Score=50.82  Aligned_cols=93  Identities=11%  Similarity=0.059  Sum_probs=60.2

Q ss_pred             CCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCee--EecCCCccHHHHHHhHCCCCccEEEeCC
Q 028523           19 GEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEA--FNYKEEPDLDAALKRYFPEGINIYFENV   96 (208)
Q Consensus        19 g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~v--~~~~~~~~~~~~~~~~~~~~~d~v~d~~   96 (208)
                      +.+|+|+| +|++|...++.+...|.+|++++++.++.+.+.+.++....  +|..+   .. .+.+... ++|+|++++
T Consensus         3 ~k~VlViG-aG~iG~~ia~~L~~~G~~V~v~~R~~~~a~~la~~~~~~~~~~~Dv~d---~~-~l~~~l~-~~DvVIn~a   76 (450)
T 1ff9_A            3 TKSVLMLG-SGFVTRPTLDVLTDSGIKVTVACRTLESAKKLSAGVQHSTPISLDVND---DA-ALDAEVA-KHDLVISLI   76 (450)
T ss_dssp             CCEEEEEC-CSTTHHHHHHHHHTTTCEEEEEESSHHHHHHTTTTCTTEEEEECCTTC---HH-HHHHHHT-TSSEEEECC
T ss_pred             CCEEEEEC-CCHHHHHHHHHHHhCcCEEEEEECCHHHHHHHHHhcCCceEEEeecCC---HH-HHHHHHc-CCcEEEECC
Confidence            56899998 69999999988888899999999998877665534442122  23332   22 2222222 599999999


Q ss_pred             Cch-hHHHHHHhhccCCEEEEE
Q 028523           97 GGK-MLDAVLLNMRIQGRITLC  117 (208)
Q Consensus        97 g~~-~~~~~~~~l~~~G~~v~~  117 (208)
                      +.. .......++.++-+++..
T Consensus        77 ~~~~~~~i~~a~l~~g~~vvd~   98 (450)
T 1ff9_A           77 PYTFHATVIKSAIRQKKHVVTT   98 (450)
T ss_dssp             C--CHHHHHHHHHHHTCEEEES
T ss_pred             ccccchHHHHHHHhCCCeEEEe
Confidence            843 333345566676666654

>4e5n_A Thermostable phosphite dehydrogenase; D-2-hydroxyacid dehydrogenase, oxidoreductase; HET: NAD; 1.70A {Pseudomonas stutzeri} PDB: 4e5k_A* 4ebf_A* 4e5p_A* 4e5m_A*

Probab=97.37  E-value=0.00054  Score=52.26  Aligned_cols=89  Identities=9%  Similarity=0.007  Sum_probs=64.5

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHHHHhHCCCCccEEEeCCC
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVG   97 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~d~v~d~~g   97 (208)
                      .|.+|.|.| .|.+|...++.++..|.+|++.+++..+.+... .+|...    .   ++.+.+.+     .|+|+.++.
T Consensus       144 ~g~tvGIIG-~G~IG~~vA~~l~~~G~~V~~~d~~~~~~~~~~-~~g~~~----~---~l~ell~~-----aDvV~l~~P  209 (330)
T 4e5n_A          144 DNATVGFLG-MGAIGLAMADRLQGWGATLQYHEAKALDTQTEQ-RLGLRQ----V---ACSELFAS-----SDFILLALP  209 (330)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHTTTSCCEEEEECSSCCCHHHHH-HHTEEE----C---CHHHHHHH-----CSEEEECCC
T ss_pred             CCCEEEEEe-eCHHHHHHHHHHHHCCCEEEEECCCCCcHhHHH-hcCcee----C---CHHHHHhh-----CCEEEEcCC
Confidence            578999999 599999999999999999999998875555555 566421    1   34444433     688888776


Q ss_pred             -ch-----hHHHHHHhhccCCEEEEEecc
Q 028523           98 -GK-----MLDAVLLNMRIQGRITLCGMI  120 (208)
Q Consensus        98 -~~-----~~~~~~~~l~~~G~~v~~g~~  120 (208)
                       .+     .-...+..|+++..++.++..
T Consensus       210 ~t~~t~~li~~~~l~~mk~gailIN~arg  238 (330)
T 4e5n_A          210 LNADTLHLVNAELLALVRPGALLVNPCRG  238 (330)
T ss_dssp             CSTTTTTCBCHHHHTTSCTTEEEEECSCG
T ss_pred             CCHHHHHHhCHHHHhhCCCCcEEEECCCC
Confidence             22     124677788888888887753

>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}

Probab=97.37  E-value=0.0011  Score=49.79  Aligned_cols=93  Identities=13%  Similarity=0.078  Sum_probs=59.6

Q ss_pred             CEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHHHHhHCCCCccEEEeCCCch
Q 028523           20 EYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVGGK   99 (208)
Q Consensus        20 ~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~d~v~d~~g~~   99 (208)
                      .+|||+||+|.+|...++.+...|.+|+++++++...+ +.   +.. ++. -+- . .+.+.+... ++|+||.+.+..
T Consensus         3 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-~~---~~~-~~~-~Dl-~-~~~~~~~~~-~~d~Vih~a~~~   73 (311)
T 3m2p_A            3 LKIAVTGGTGFLGQYVVESIKNDGNTPIILTRSIGNKA-IN---DYE-YRV-SDY-T-LEDLINQLN-DVDAVVHLAATR   73 (311)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCC---------CCE-EEE-CCC-C-HHHHHHHTT-TCSEEEECCCCC
T ss_pred             CEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCCCccc-CC---ceE-EEE-ccc-c-HHHHHHhhc-CCCEEEEccccC
Confidence            57999999999999999999989999999999854444 33   332 221 122 3 445555544 699999998731


Q ss_pred             --------------hHHHHHHhhccC--CEEEEEeccc
Q 028523          100 --------------MLDAVLLNMRIQ--GRITLCGMIS  121 (208)
Q Consensus       100 --------------~~~~~~~~l~~~--G~~v~~g~~~  121 (208)
                                    .....++.+...  .+++.++...
T Consensus        74 ~~~~~~~~~~~n~~~~~~ll~a~~~~~~~r~v~~SS~~  111 (311)
T 3m2p_A           74 GSQGKISEFHDNEILTQNLYDACYENNISNIVYASTIS  111 (311)
T ss_dssp             CSSSCGGGTHHHHHHHHHHHHHHHHTTCCEEEEEEEGG
T ss_pred             CCCChHHHHHHHHHHHHHHHHHHHHcCCCEEEEEccHH
Confidence                          113344444443  4788887643

>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7

Probab=97.36  E-value=0.00015  Score=52.10  Aligned_cols=97  Identities=14%  Similarity=0.117  Sum_probs=65.9

Q ss_pred             CCCCCCEEEEecCCchHHHHHHHHHHHcC-------CEEEEEeCCHHHHHHHHHhc---C-----CC--eeEecCCCccH
Q 028523           15 SPKQGEYVFVSAASGAVGQLVGQFAKLVG-------CYVVGSAGSKDKVDLLKNKF---G-----FD--EAFNYKEEPDL   77 (208)
Q Consensus        15 ~~~~g~~vli~ga~g~vG~~a~qla~~~g-------~~v~~~~~s~~~~~~~~~~~---g-----~~--~v~~~~~~~~~   77 (208)
                      .++++++||-.|+ | .|..+..+++..+       .+|++++.+++..+.+++.+   +     ..  .++..    +.
T Consensus        81 ~~~~~~~VLdiG~-G-~G~~~~~la~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~----d~  154 (227)
T 1r18_A           81 HLKPGARILDVGS-G-SGYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSMLDSGQLLIVEG----DG  154 (227)
T ss_dssp             TCCTTCEEEEESC-T-TSHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHHHHHHTSEEEEES----CG
T ss_pred             hCCCCCEEEEECC-C-ccHHHHHHHHhcccccCCccCEEEEEEcCHHHHHHHHHHHHhcCccccCCCceEEEEC----Cc
Confidence            5788999999984 4 3888888888776       49999999998777766322   1     11  12211    21


Q ss_pred             HHHHHhHCCCCccEEEeCCC-chhHHHHHHhhccCCEEEEEec
Q 028523           78 DAALKRYFPEGINIYFENVG-GKMLDAVLLNMRIQGRITLCGM  119 (208)
Q Consensus        78 ~~~~~~~~~~~~d~v~d~~g-~~~~~~~~~~l~~~G~~v~~g~  119 (208)
                      .+.+..  .+.||+|+.... ......+.+.|++||+++..-.
T Consensus       155 ~~~~~~--~~~fD~I~~~~~~~~~~~~~~~~LkpgG~lvi~~~  195 (227)
T 1r18_A          155 RKGYPP--NAPYNAIHVGAAAPDTPTELINQLASGGRLIVPVG  195 (227)
T ss_dssp             GGCCGG--GCSEEEEEECSCBSSCCHHHHHTEEEEEEEEEEES
T ss_pred             ccCCCc--CCCccEEEECCchHHHHHHHHHHhcCCCEEEEEEe
Confidence            111111  136999998776 4566889999999999877543

>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*

Probab=97.35  E-value=0.0015  Score=49.96  Aligned_cols=95  Identities=23%  Similarity=0.216  Sum_probs=59.8

Q ss_pred             CCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCH----HHHHHHHH--hcCCCe-eEecCCCccHHHHHHhHCCCCccE
Q 028523           19 GEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSK----DKVDLLKN--KFGFDE-AFNYKEEPDLDAALKRYFPEGINI   91 (208)
Q Consensus        19 g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~----~~~~~~~~--~~g~~~-v~~~~~~~~~~~~~~~~~~~~~d~   91 (208)
                      ..+|||+||+|.+|...++.+...|.+|++++|++    ++.+.+.+  ..+... ..|..+.+.+.+.+.+   .++|+
T Consensus        10 ~~~IlVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~~---~~~d~   86 (346)
T 3i6i_A           10 KGRVLIAGATGFIGQFVATASLDAHRPTYILARPGPRSPSKAKIFKALEDKGAIIVYGLINEQEAMEKILKE---HEIDI   86 (346)
T ss_dssp             -CCEEEECTTSHHHHHHHHHHHHTTCCEEEEECSSCCCHHHHHHHHHHHHTTCEEEECCTTCHHHHHHHHHH---TTCCE
T ss_pred             CCeEEEECCCcHHHHHHHHHHHHCCCCEEEEECCCCCChhHHHHHHHHHhCCcEEEEeecCCHHHHHHHHhh---CCCCE
Confidence            35799999999999999998888899999999876    44443331  234432 2344433123333332   16999


Q ss_pred             EEeCCCch---hHHHHHHhhccCC---EEEE
Q 028523           92 YFENVGGK---MLDAVLLNMRIQG---RITL  116 (208)
Q Consensus        92 v~d~~g~~---~~~~~~~~l~~~G---~~v~  116 (208)
                      ||.+.+..   .....++.++..|   +++.
T Consensus        87 Vi~~a~~~n~~~~~~l~~aa~~~g~v~~~v~  117 (346)
T 3i6i_A           87 VVSTVGGESILDQIALVKAMKAVGTIKRFLP  117 (346)
T ss_dssp             EEECCCGGGGGGHHHHHHHHHHHCCCSEEEC
T ss_pred             EEECCchhhHHHHHHHHHHHHHcCCceEEee
Confidence            99999842   2334555554434   5553

>1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2

Probab=97.35  E-value=0.00078  Score=50.15  Aligned_cols=64  Identities=9%  Similarity=0.135  Sum_probs=43.9

Q ss_pred             CCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHHHHhHCCCCccEEEeC
Q 028523           16 PKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFEN   95 (208)
Q Consensus        16 ~~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~d~v~d~   95 (208)
                      -.+..+|||+||+|.+|...++.+...|.+|++++++.               .|..+.+.+.+.+...   ++|+||++
T Consensus         9 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~---------------~Dl~d~~~~~~~~~~~---~~d~vih~   70 (292)
T 1vl0_A            9 HHHHMKILITGANGQLGREIQKQLKGKNVEVIPTDVQD---------------LDITNVLAVNKFFNEK---KPNVVINC   70 (292)
T ss_dssp             ---CEEEEEESTTSHHHHHHHHHHTTSSEEEEEECTTT---------------CCTTCHHHHHHHHHHH---CCSEEEEC
T ss_pred             ccccceEEEECCCChHHHHHHHHHHhCCCeEEeccCcc---------------CCCCCHHHHHHHHHhc---CCCEEEEC
Confidence            35667899999999999999998888899999998751               1222221233333322   58899988


Q ss_pred             CC
Q 028523           96 VG   97 (208)
Q Consensus        96 ~g   97 (208)
                      .+
T Consensus        71 A~   72 (292)
T 1vl0_A           71 AA   72 (292)
T ss_dssp             CC
T ss_pred             Cc
Confidence            77

>3jtm_A Formate dehydrogenase, mitochondrial; mitochondrion, NAD, oxidoreductase, T peptide; 1.30A {Arabidopsis thaliana} PDB: 3n7u_A* 3naq_A

Probab=97.34  E-value=0.00088  Score=51.46  Aligned_cols=91  Identities=19%  Similarity=0.197  Sum_probs=67.1

Q ss_pred             CCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHHHHhHCCCCccEEEeCC
Q 028523           17 KQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENV   96 (208)
Q Consensus        17 ~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~d~v~d~~   96 (208)
                      -.|.+|.|.| .|.+|...++.++.+|.+|++.++++...+.+. +.|...+     . ++.+.+.+     .|+|+.++
T Consensus       162 l~gktvGIIG-~G~IG~~vA~~l~~~G~~V~~~dr~~~~~~~~~-~~g~~~~-----~-~l~ell~~-----aDvV~l~~  228 (351)
T 3jtm_A          162 LEGKTIGTVG-AGRIGKLLLQRLKPFGCNLLYHDRLQMAPELEK-ETGAKFV-----E-DLNEMLPK-----CDVIVINM  228 (351)
T ss_dssp             STTCEEEEEC-CSHHHHHHHHHHGGGCCEEEEECSSCCCHHHHH-HHCCEEC-----S-CHHHHGGG-----CSEEEECS
T ss_pred             ccCCEEeEEE-eCHHHHHHHHHHHHCCCEEEEeCCCccCHHHHH-hCCCeEc-----C-CHHHHHhc-----CCEEEECC
Confidence            4688999999 599999999999999999999998876666666 6675322     1 34444332     78888887


Q ss_pred             C-ch-----hHHHHHHhhccCCEEEEEecc
Q 028523           97 G-GK-----MLDAVLLNMRIQGRITLCGMI  120 (208)
Q Consensus        97 g-~~-----~~~~~~~~l~~~G~~v~~g~~  120 (208)
                      . .+     .-...+..|+++..++.++..
T Consensus       229 Plt~~t~~li~~~~l~~mk~gailIN~aRG  258 (351)
T 3jtm_A          229 PLTEKTRGMFNKELIGKLKKGVLIVNNARG  258 (351)
T ss_dssp             CCCTTTTTCBSHHHHHHSCTTEEEEECSCG
T ss_pred             CCCHHHHHhhcHHHHhcCCCCCEEEECcCc
Confidence            6 22     125677888888888887753

>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2

Probab=97.34  E-value=0.00075  Score=50.60  Aligned_cols=92  Identities=16%  Similarity=0.217  Sum_probs=57.3

Q ss_pred             CCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCH------HHHHHHHH--hcCCCe-eEecCCCccHHHHHHhHCCCCc
Q 028523           19 GEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSK------DKVDLLKN--KFGFDE-AFNYKEEPDLDAALKRYFPEGI   89 (208)
Q Consensus        19 g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~------~~~~~~~~--~~g~~~-v~~~~~~~~~~~~~~~~~~~~~   89 (208)
                      ..+|+|+||+|.+|...++.+...|.+|++.+|+.      ++.+.+.+  ..|... ..|..+.+.+.+.++     ++
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d~~~l~~~~~-----~~   78 (308)
T 1qyc_A            4 RSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKASGANIVHGSIDDHASLVEAVK-----NV   78 (308)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHHHHHHHHHHTTTCEEECCCTTCHHHHHHHHH-----TC
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHhCCCCEEEEECCcccccCHHHHHHHHHHHhCCCEEEEeccCCHHHHHHHHc-----CC
Confidence            35799999999999999998888899999999873      33333330  234422 234443312333332     59


Q ss_pred             cEEEeCCCch---hHHHHHHhhcc-C--CEEE
Q 028523           90 NIYFENVGGK---MLDAVLLNMRI-Q--GRIT  115 (208)
Q Consensus        90 d~v~d~~g~~---~~~~~~~~l~~-~--G~~v  115 (208)
                      |.||.+++..   .....++.+.. +  ++++
T Consensus        79 d~vi~~a~~~~~~~~~~l~~aa~~~g~v~~~v  110 (308)
T 1qyc_A           79 DVVISTVGSLQIESQVNIIKAIKEVGTVKRFF  110 (308)
T ss_dssp             SEEEECCCGGGSGGGHHHHHHHHHHCCCSEEE
T ss_pred             CEEEECCcchhhhhHHHHHHHHHhcCCCceEe
Confidence            9999998842   22334444433 2  4776

>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*

Probab=97.34  E-value=0.0018  Score=44.73  Aligned_cols=98  Identities=15%  Similarity=0.192  Sum_probs=65.8

Q ss_pred             cCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHh---cCCCe--eEecCCCccHHHHHHhHCCCC
Q 028523           14 CSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNK---FGFDE--AFNYKEEPDLDAALKRYFPEG   88 (208)
Q Consensus        14 ~~~~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~---~g~~~--v~~~~~~~~~~~~~~~~~~~~   88 (208)
                      ..++++++||=.|+  |.|..+..+++. +.+|++++.+++..+.+++.   .|.+.  ++. .   +.. .+....++.
T Consensus        18 ~~~~~~~~vLDiGc--G~G~~~~~la~~-~~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~-~---~~~-~l~~~~~~~   89 (185)
T 3mti_A           18 EVLDDESIVVDATM--GNGNDTAFLAGL-SKKVYAFDVQEQALGKTSQRLSDLGIENTELIL-D---GHE-NLDHYVREP   89 (185)
T ss_dssp             TTCCTTCEEEESCC--TTSHHHHHHHTT-SSEEEEEESCHHHHHHHHHHHHHHTCCCEEEEE-S---CGG-GGGGTCCSC
T ss_pred             HhCCCCCEEEEEcC--CCCHHHHHHHHh-CCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEe-C---cHH-HHHhhccCC
Confidence            45789999998884  458888888877 88999999999987777642   34322  222 1   111 122223347


Q ss_pred             ccEEEeCCCc----------------hhHHHHHHhhccCCEEEEEec
Q 028523           89 INIYFENVGG----------------KMLDAVLLNMRIQGRITLCGM  119 (208)
Q Consensus        89 ~d~v~d~~g~----------------~~~~~~~~~l~~~G~~v~~g~  119 (208)
                      ||+|+-..+.                ..+..+.+.|+|||+++.+..
T Consensus        90 fD~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~  136 (185)
T 3mti_A           90 IRAAIFNLGYLPSADKSVITKPHTTLEAIEKILDRLEVGGRLAIMIY  136 (185)
T ss_dssp             EEEEEEEEC-----------CHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred             cCEEEEeCCCCCCcchhcccChhhHHHHHHHHHHhcCCCcEEEEEEe
Confidence            9999765321                235788899999999987644

>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7

Probab=97.33  E-value=0.00071  Score=48.59  Aligned_cols=101  Identities=12%  Similarity=0.077  Sum_probs=68.5

Q ss_pred             HHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCC--C-eeEecCCCccHHHHHHhHCC
Q 028523           10 FFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGF--D-EAFNYKEEPDLDAALKRYFP   86 (208)
Q Consensus        10 l~~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~--~-~v~~~~~~~~~~~~~~~~~~   86 (208)
                      +.....+.++++||-.|+ | .|..+..+++.. .+|++++.+++..+.+++.+..  . .++..    +..+...  ..
T Consensus        62 ~~~~~~~~~~~~vLdiG~-G-~G~~~~~l~~~~-~~v~~vD~~~~~~~~a~~~~~~~~~v~~~~~----d~~~~~~--~~  132 (231)
T 1vbf_A           62 MLDELDLHKGQKVLEIGT-G-IGYYTALIAEIV-DKVVSVEINEKMYNYASKLLSYYNNIKLILG----DGTLGYE--EE  132 (231)
T ss_dssp             HHHHTTCCTTCEEEEECC-T-TSHHHHHHHHHS-SEEEEEESCHHHHHHHHHHHTTCSSEEEEES----CGGGCCG--GG
T ss_pred             HHHhcCCCCCCEEEEEcC-C-CCHHHHHHHHHc-CEEEEEeCCHHHHHHHHHHHhhcCCeEEEEC----Ccccccc--cC
Confidence            335567889999999984 4 488888888764 8999999999988888754432  1 22221    2111011  12


Q ss_pred             CCccEEEeCCC-chhHHHHHHhhccCCEEEEEec
Q 028523           87 EGINIYFENVG-GKMLDAVLLNMRIQGRITLCGM  119 (208)
Q Consensus        87 ~~~d~v~d~~g-~~~~~~~~~~l~~~G~~v~~g~  119 (208)
                      +.+|+|+.... ......+.+.|++||+++..-.
T Consensus       133 ~~fD~v~~~~~~~~~~~~~~~~L~pgG~l~~~~~  166 (231)
T 1vbf_A          133 KPYDRVVVWATAPTLLCKPYEQLKEGGIMILPIG  166 (231)
T ss_dssp             CCEEEEEESSBBSSCCHHHHHTEEEEEEEEEEEC
T ss_pred             CCccEEEECCcHHHHHHHHHHHcCCCcEEEEEEc
Confidence            36999997765 3455688899999999887644

>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A*

Probab=97.33  E-value=0.0033  Score=48.34  Aligned_cols=97  Identities=15%  Similarity=0.138  Sum_probs=60.4

Q ss_pred             CCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHH--HHHHHhc-CCCe-eEe-cCCCccHHHHHHhHCCCCccEEE
Q 028523           19 GEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKV--DLLKNKF-GFDE-AFN-YKEEPDLDAALKRYFPEGINIYF   93 (208)
Q Consensus        19 g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~--~~~~~~~-g~~~-v~~-~~~~~~~~~~~~~~~~~~~d~v~   93 (208)
                      +.+|+|+||+|.+|...++.+...|.+|+++++++++.  +.+. .. +... ..| ..+.    +.+.+... ++|.||
T Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~l~-~~~~v~~v~~D~l~d~----~~l~~~~~-~~d~Vi   78 (352)
T 1xgk_A            5 KKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLIAEELQ-AIPNVTLFQGPLLNNV----PLMDTLFE-GAHLAF   78 (352)
T ss_dssp             CCCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSCSHHHHHHH-TSTTEEEEESCCTTCH----HHHHHHHT-TCSEEE
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCCChhhHHHHh-hcCCcEEEECCccCCH----HHHHHHHh-cCCEEE
Confidence            46799999999999999988888899999999887654  3333 22 2211 123 3332    12222222 489999


Q ss_pred             eCCCch------hHHHHHHhhcc-C--CEEEEEeccc
Q 028523           94 ENVGGK------MLDAVLLNMRI-Q--GRITLCGMIS  121 (208)
Q Consensus        94 d~~g~~------~~~~~~~~l~~-~--G~~v~~g~~~  121 (208)
                      .+.+..      .....++.+.. +  ++++.++...
T Consensus        79 ~~a~~~~~~~~~~~~~l~~aa~~~g~v~~~V~~SS~~  115 (352)
T 1xgk_A           79 INTTSQAGDEIAIGKDLADAAKRAGTIQHYIYSSMPD  115 (352)
T ss_dssp             ECCCSTTSCHHHHHHHHHHHHHHHSCCSEEEEEECCC
T ss_pred             EcCCCCCcHHHHHHHHHHHHHHHcCCccEEEEeCCcc
Confidence            776531      12333444433 3  5899888753

>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*

Probab=97.33  E-value=0.0006  Score=51.46  Aligned_cols=98  Identities=10%  Similarity=0.087  Sum_probs=67.5

Q ss_pred             CCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHh---cCCC---eeEecCCCccHHHHHHhHCCCCc
Q 028523           16 PKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNK---FGFD---EAFNYKEEPDLDAALKRYFPEGI   89 (208)
Q Consensus        16 ~~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~---~g~~---~v~~~~~~~~~~~~~~~~~~~~~   89 (208)
                      ++++++||-.|+  |.|..+..+++..|++|++++.+++..+.+++.   .|..   .++..    ++.+ + ....+.|
T Consensus       115 ~~~~~~vLDiGc--G~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~----d~~~-~-~~~~~~f  186 (312)
T 3vc1_A          115 AGPDDTLVDAGC--GRGGSMVMAHRRFGSRVEGVTLSAAQADFGNRRARELRIDDHVRSRVC----NMLD-T-PFDKGAV  186 (312)
T ss_dssp             CCTTCEEEEESC--TTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEEC----CTTS-C-CCCTTCE
T ss_pred             CCCCCEEEEecC--CCCHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCceEEEEC----Chhc-C-CCCCCCE
Confidence            788999999984  458888888888789999999999988777632   3432   12211    1110 0 0122379


Q ss_pred             cEEEeCC-----C-chhHHHHHHhhccCCEEEEEeccc
Q 028523           90 NIYFENV-----G-GKMLDAVLLNMRIQGRITLCGMIS  121 (208)
Q Consensus        90 d~v~d~~-----g-~~~~~~~~~~l~~~G~~v~~g~~~  121 (208)
                      |+|+...     + ...+..+.+.|+|||+++......
T Consensus       187 D~V~~~~~l~~~~~~~~l~~~~~~LkpgG~l~~~~~~~  224 (312)
T 3vc1_A          187 TASWNNESTMYVDLHDLFSEHSRFLKVGGRYVTITGCW  224 (312)
T ss_dssp             EEEEEESCGGGSCHHHHHHHHHHHEEEEEEEEEEEEEE
T ss_pred             eEEEECCchhhCCHHHHHHHHHHHcCCCcEEEEEEccc
Confidence            9997632     2 346888999999999998876443

>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*

Probab=97.32  E-value=0.00081  Score=50.10  Aligned_cols=97  Identities=14%  Similarity=0.115  Sum_probs=65.4

Q ss_pred             CCCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHhc----CC--------CeeEecCCCccHHHHHH
Q 028523           16 PKQGEYVFVSAASGAVGQLVGQFAKLVGC-YVVGSAGSKDKVDLLKNKF----GF--------DEAFNYKEEPDLDAALK   82 (208)
Q Consensus        16 ~~~g~~vli~ga~g~vG~~a~qla~~~g~-~v~~~~~s~~~~~~~~~~~----g~--------~~v~~~~~~~~~~~~~~   82 (208)
                      ...+.+||..|+  |.|..+..+++. +. +|++++.+++-.+.+++.+    +.        +.-+..... +..+.+.
T Consensus        73 ~~~~~~VLdiG~--G~G~~~~~l~~~-~~~~v~~vDid~~~i~~ar~~~~~~~~l~~~~~~~~~~~v~~~~~-D~~~~l~  148 (281)
T 1mjf_A           73 HPKPKRVLVIGG--GDGGTVREVLQH-DVDEVIMVEIDEDVIMVSKDLIKIDNGLLEAMLNGKHEKAKLTIG-DGFEFIK  148 (281)
T ss_dssp             SSCCCEEEEEEC--TTSHHHHHHTTS-CCSEEEEEESCHHHHHHHHHHTCTTTTHHHHHHTTCCSSEEEEES-CHHHHHH
T ss_pred             CCCCCeEEEEcC--CcCHHHHHHHhC-CCCEEEEEECCHHHHHHHHHHHhhccccccccccCCCCcEEEEEC-chHHHhc
Confidence            356789999984  457777788877 65 9999999999888888555    21        111111122 4444444


Q ss_pred             hHCCCCccEEEeCCC-----------chhHHHHHHhhccCCEEEEEe
Q 028523           83 RYFPEGINIYFENVG-----------GKMLDAVLLNMRIQGRITLCG  118 (208)
Q Consensus        83 ~~~~~~~d~v~d~~g-----------~~~~~~~~~~l~~~G~~v~~g  118 (208)
                      .  .+.+|+|+-...           .+.+..+.+.|++||.++...
T Consensus       149 ~--~~~fD~Ii~d~~~~~~~~~~l~~~~~l~~~~~~L~pgG~lv~~~  193 (281)
T 1mjf_A          149 N--NRGFDVIIADSTDPVGPAKVLFSEEFYRYVYDALNNPGIYVTQA  193 (281)
T ss_dssp             H--CCCEEEEEEECCCCC-----TTSHHHHHHHHHHEEEEEEEEEEE
T ss_pred             c--cCCeeEEEECCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEc
Confidence            4  447999875332           235788899999999998753

>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}

Probab=97.31  E-value=0.00091  Score=48.31  Aligned_cols=99  Identities=13%  Similarity=0.149  Sum_probs=66.1

Q ss_pred             cCCCCCCEEEEecCCchHHHHHHHHHHHcCC--EEEEEeCCHHHHHHHHHhcCC-C--eeEecCCCccHHHHHHhHCCCC
Q 028523           14 CSPKQGEYVFVSAASGAVGQLVGQFAKLVGC--YVVGSAGSKDKVDLLKNKFGF-D--EAFNYKEEPDLDAALKRYFPEG   88 (208)
Q Consensus        14 ~~~~~g~~vli~ga~g~vG~~a~qla~~~g~--~v~~~~~s~~~~~~~~~~~g~-~--~v~~~~~~~~~~~~~~~~~~~~   88 (208)
                      ..+++|++||=.|+  |.|..+..+++..|.  +|++++.+++..+.+++.... .  ..+..... +. ... ....+.
T Consensus        73 l~ikpG~~VldlG~--G~G~~~~~la~~VG~~G~V~avD~s~~~~~~l~~~a~~~~ni~~V~~d~~-~p-~~~-~~~~~~  147 (233)
T 4df3_A           73 LPVKEGDRILYLGI--ASGTTASHMSDIIGPRGRIYGVEFAPRVMRDLLTVVRDRRNIFPILGDAR-FP-EKY-RHLVEG  147 (233)
T ss_dssp             CCCCTTCEEEEETC--TTSHHHHHHHHHHCTTCEEEEEECCHHHHHHHHHHSTTCTTEEEEESCTT-CG-GGG-TTTCCC
T ss_pred             cCCCCCCEEEEecC--cCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHhhHhhcCeeEEEEecc-Cc-ccc-ccccce
Confidence            46899999999985  558889999999875  899999999988887743322 1  11211111 11 000 111226


Q ss_pred             ccEEEeCCC-ch----hHHHHHHhhccCCEEEEE
Q 028523           89 INIYFENVG-GK----MLDAVLLNMRIQGRITLC  117 (208)
Q Consensus        89 ~d~v~d~~g-~~----~~~~~~~~l~~~G~~v~~  117 (208)
                      +|+||.... .+    .+..+.+.|+|||+++..
T Consensus       148 vDvVf~d~~~~~~~~~~l~~~~r~LKpGG~lvI~  181 (233)
T 4df3_A          148 VDGLYADVAQPEQAAIVVRNARFFLRDGGYMLMA  181 (233)
T ss_dssp             EEEEEECCCCTTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred             EEEEEEeccCChhHHHHHHHHHHhccCCCEEEEE
Confidence            898886554 22    467788899999998865

>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13

Probab=97.30  E-value=0.0014  Score=48.47  Aligned_cols=101  Identities=7%  Similarity=0.070  Sum_probs=68.7

Q ss_pred             HhcCCCCCCEEEEecCCchHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHhc----CCCeeEecCCCccHHHHHHhHC
Q 028523           12 EVCSPKQGEYVFVSAASGAVGQLVGQFAKLV--GCYVVGSAGSKDKVDLLKNKF----GFDEAFNYKEEPDLDAALKRYF   85 (208)
Q Consensus        12 ~~~~~~~g~~vli~ga~g~vG~~a~qla~~~--g~~v~~~~~s~~~~~~~~~~~----g~~~v~~~~~~~~~~~~~~~~~   85 (208)
                      ....++++++||-.|+  |.|..+..+++..  +.+|++++.+++..+.+++.+    |.+.+ ..... ++.+   ...
T Consensus       104 ~~~~~~~~~~VLD~G~--G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~g~~~v-~~~~~-d~~~---~~~  176 (275)
T 1yb2_A          104 MRCGLRPGMDILEVGV--GSGNMSSYILYALNGKGTLTVVERDEDNLKKAMDNLSEFYDIGNV-RTSRS-DIAD---FIS  176 (275)
T ss_dssp             --CCCCTTCEEEEECC--TTSHHHHHHHHHHTTSSEEEEECSCHHHHHHHHHHHHTTSCCTTE-EEECS-CTTT---CCC
T ss_pred             HHcCCCCcCEEEEecC--CCCHHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhcCCCCcE-EEEEC-chhc---cCc
Confidence            4457889999999884  3688888888874  579999999999888776433    53322 11111 2211   111


Q ss_pred             CCCccEEEeCCCc--hhHHHHHHhhccCCEEEEEec
Q 028523           86 PEGINIYFENVGG--KMLDAVLLNMRIQGRITLCGM  119 (208)
Q Consensus        86 ~~~~d~v~d~~g~--~~~~~~~~~l~~~G~~v~~g~  119 (208)
                      .+.+|+|+.....  ..+..+.+.|+++|.++....
T Consensus       177 ~~~fD~Vi~~~~~~~~~l~~~~~~LkpgG~l~i~~~  212 (275)
T 1yb2_A          177 DQMYDAVIADIPDPWNHVQKIASMMKPGSVATFYLP  212 (275)
T ss_dssp             SCCEEEEEECCSCGGGSHHHHHHTEEEEEEEEEEES
T ss_pred             CCCccEEEEcCcCHHHHHHHHHHHcCCCCEEEEEeC
Confidence            2369999976652  578899999999999987643

>2dbq_A Glyoxylate reductase; D-3-phosphoglycerate dehydrogenase, ST genomics, NPPSFA; HET: NAP; 1.70A {Pyrococcus horikoshii} PDB: 2dbr_A* 2dbz_A*

Probab=97.30  E-value=0.0026  Score=48.62  Aligned_cols=88  Identities=14%  Similarity=0.206  Sum_probs=64.6

Q ss_pred             CCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHHHHhHCCCCccEEEeCC
Q 028523           17 KQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENV   96 (208)
Q Consensus        17 ~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~d~v~d~~   96 (208)
                      -.|.+|.|+| .|.+|...++.++..|.+|++.+++.++ +.+. ++|..    +.   ++.+.+.+     .|+|+.++
T Consensus       148 l~g~~vgIIG-~G~iG~~iA~~l~~~G~~V~~~d~~~~~-~~~~-~~g~~----~~---~l~~~l~~-----aDvVil~v  212 (334)
T 2dbq_A          148 VYGKTIGIIG-LGRIGQAIAKRAKGFNMRILYYSRTRKE-EVER-ELNAE----FK---PLEDLLRE-----SDFVVLAV  212 (334)
T ss_dssp             CTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSCCH-HHHH-HHCCE----EC---CHHHHHHH-----CSEEEECC
T ss_pred             CCCCEEEEEc-cCHHHHHHHHHHHhCCCEEEEECCCcch-hhHh-hcCcc----cC---CHHHHHhh-----CCEEEECC
Confidence            3578999999 4999999999999999999999988776 5555 56652    11   34444433     79999988


Q ss_pred             Cc-h----hH-HHHHHhhccCCEEEEEec
Q 028523           97 GG-K----ML-DAVLLNMRIQGRITLCGM  119 (208)
Q Consensus        97 g~-~----~~-~~~~~~l~~~G~~v~~g~  119 (208)
                      .. .    .+ ...+..|+++..++.++.
T Consensus       213 p~~~~t~~~i~~~~~~~mk~~ailIn~sr  241 (334)
T 2dbq_A          213 PLTRETYHLINEERLKLMKKTAILINIAR  241 (334)
T ss_dssp             CCCTTTTTCBCHHHHHHSCTTCEEEECSC
T ss_pred             CCChHHHHhhCHHHHhcCCCCcEEEECCC
Confidence            73 2    12 456778888888887764

>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*

Probab=97.30  E-value=0.0012  Score=46.80  Aligned_cols=99  Identities=14%  Similarity=0.142  Sum_probs=67.2

Q ss_pred             hcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHHHHhHCCCCccEE
Q 028523           13 VCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIY   92 (208)
Q Consensus        13 ~~~~~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~d~v   92 (208)
                      +..+.++.+||-.|+  |.|..+..+++. |.++++++.+++..+.++ +.+...+ ..... ++.+.   ...+.+|+|
T Consensus        41 l~~~~~~~~vLdiG~--G~G~~~~~l~~~-~~~v~~~D~s~~~~~~a~-~~~~~~~-~~~~~-d~~~~---~~~~~~D~v  111 (218)
T 3ou2_A           41 LRAGNIRGDVLELAS--GTGYWTRHLSGL-ADRVTALDGSAEMIAEAG-RHGLDNV-EFRQQ-DLFDW---TPDRQWDAV  111 (218)
T ss_dssp             HTTTTSCSEEEEESC--TTSHHHHHHHHH-SSEEEEEESCHHHHHHHG-GGCCTTE-EEEEC-CTTSC---CCSSCEEEE
T ss_pred             HhcCCCCCeEEEECC--CCCHHHHHHHhc-CCeEEEEeCCHHHHHHHH-hcCCCCe-EEEec-ccccC---CCCCceeEE
Confidence            345788899999984  347777788777 889999999999999888 5553321 11111 21111   123379999


Q ss_pred             EeCCC---------chhHHHHHHhhccCCEEEEEecc
Q 028523           93 FENVG---------GKMLDAVLLNMRIQGRITLCGMI  120 (208)
Q Consensus        93 ~d~~g---------~~~~~~~~~~l~~~G~~v~~g~~  120 (208)
                      +....         ...+..+.+.|+|||.++.....
T Consensus       112 ~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~  148 (218)
T 3ou2_A          112 FFAHWLAHVPDDRFEAFWESVRSAVAPGGVVEFVDVT  148 (218)
T ss_dssp             EEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred             EEechhhcCCHHHHHHHHHHHHHHcCCCeEEEEEeCC
Confidence            86542         12467888999999999887553

>2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A*

Probab=97.29  E-value=0.0011  Score=50.43  Aligned_cols=75  Identities=24%  Similarity=0.220  Sum_probs=48.2

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH--hcCC----Cee--EecCCCccHHHHHHhHCCCCc
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKN--KFGF----DEA--FNYKEEPDLDAALKRYFPEGI   89 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~--~~g~----~~v--~~~~~~~~~~~~~~~~~~~~~   89 (208)
                      .+.+|||+||+|.+|...++.+...|++|++++++.+..+.+.+  .+..    -.+  .|..+...+.+.+.     ++
T Consensus         4 ~~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-----~~   78 (337)
T 2c29_D            4 QSETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPTNVKKVKHLLDLPKAETHLTLWKADLADEGSFDEAIK-----GC   78 (337)
T ss_dssp             --CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCTTCHHHHHHHHTSTTHHHHEEEEECCTTSTTTTHHHHT-----TC
T ss_pred             CCCEEEEECCchHHHHHHHHHHHHCCCEEEEEECCcchhHHHHHHHhcccCCCeEEEEEcCCCCHHHHHHHHc-----CC
Confidence            46789999999999999998888889999999987763322220  2211    011  24444323333332     48


Q ss_pred             cEEEeCCC
Q 028523           90 NIYFENVG   97 (208)
Q Consensus        90 d~v~d~~g   97 (208)
                      |+||.+.+
T Consensus        79 d~Vih~A~   86 (337)
T 2c29_D           79 TGVFHVAT   86 (337)
T ss_dssp             SEEEECCC
T ss_pred             CEEEEecc
Confidence            99999765

>1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A*

Probab=97.29  E-value=0.00095  Score=50.94  Aligned_cols=76  Identities=17%  Similarity=0.206  Sum_probs=48.6

Q ss_pred             CCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCH----------HHHHHHHHhcCCC-e--eEecCCCccHHHHHHhHC
Q 028523           19 GEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSK----------DKVDLLKNKFGFD-E--AFNYKEEPDLDAALKRYF   85 (208)
Q Consensus        19 g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~----------~~~~~~~~~~g~~-~--v~~~~~~~~~~~~~~~~~   85 (208)
                      +.+|||+||+|.+|..+++.+...|.+|++++++.          +..+.+.+..+.. .  ..|..+...+.+.+.+. 
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~-   80 (348)
T 1ek6_A            2 AEKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFEEMDILDQGALQRLFKKY-   80 (348)
T ss_dssp             CSEEEEETTTSHHHHHHHHHHHHTTCCEEEEECSSSSCBCSSSSBHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHHC-
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEecCCcccccccccHHHHHHHHhccCCceEEEECCCCCHHHHHHHHHhc-
Confidence            36899999999999999988888899999998643          2333343112321 2  23433321233333321 


Q ss_pred             CCCccEEEeCCC
Q 028523           86 PEGINIYFENVG   97 (208)
Q Consensus        86 ~~~~d~v~d~~g   97 (208)
                        ++|+||.+.+
T Consensus        81 --~~d~vih~A~   90 (348)
T 1ek6_A           81 --SFMAVIHFAG   90 (348)
T ss_dssp             --CEEEEEECCS
T ss_pred             --CCCEEEECCC
Confidence              6999999987

>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...

Probab=97.28  E-value=0.0015  Score=46.66  Aligned_cols=101  Identities=12%  Similarity=0.088  Sum_probs=64.5

Q ss_pred             hcCCCCCCEEEEecCCchHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHH---hcCCCeeEecCCCccHHHHHHhHCC-
Q 028523           13 VCSPKQGEYVFVSAASGAVGQLVGQFAKLV--GCYVVGSAGSKDKVDLLKN---KFGFDEAFNYKEEPDLDAALKRYFP-   86 (208)
Q Consensus        13 ~~~~~~g~~vli~ga~g~vG~~a~qla~~~--g~~v~~~~~s~~~~~~~~~---~~g~~~v~~~~~~~~~~~~~~~~~~-   86 (208)
                      .....++.+||=.|+  +.|..++.+++.+  +.+|++++.+++..+.+++   ..|...-+..... +..+.+..... 
T Consensus        53 l~~~~~~~~vLdiG~--G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~-d~~~~l~~~~~~  129 (221)
T 3u81_A           53 VIREYSPSLVLELGA--YCGYSAVRMARLLQPGARLLTMEINPDCAAITQQMLNFAGLQDKVTILNG-ASQDLIPQLKKK  129 (221)
T ss_dssp             HHHHHCCSEEEEECC--TTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEES-CHHHHGGGTTTT
T ss_pred             HHHhcCCCEEEEECC--CCCHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHHcCCCCceEEEEC-CHHHHHHHHHHh
Confidence            334567889998884  5678888888865  6799999999998777764   3454321222223 45444444332 


Q ss_pred             ---CCccEEEeCCCchh-------HHHHHHhhccCCEEEEE
Q 028523           87 ---EGINIYFENVGGKM-------LDAVLLNMRIQGRITLC  117 (208)
Q Consensus        87 ---~~~d~v~d~~g~~~-------~~~~~~~l~~~G~~v~~  117 (208)
                         +.||+||-......       +... +.|+|||.++.-
T Consensus       130 ~~~~~fD~V~~d~~~~~~~~~~~~~~~~-~~LkpgG~lv~~  169 (221)
T 3u81_A          130 YDVDTLDMVFLDHWKDRYLPDTLLLEKC-GLLRKGTVLLAD  169 (221)
T ss_dssp             SCCCCCSEEEECSCGGGHHHHHHHHHHT-TCCCTTCEEEES
T ss_pred             cCCCceEEEEEcCCcccchHHHHHHHhc-cccCCCeEEEEe
Confidence               37999986544221       2222 789999998763

>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A*

Probab=97.28  E-value=0.00023  Score=52.57  Aligned_cols=95  Identities=14%  Similarity=0.077  Sum_probs=59.6

Q ss_pred             CCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCe-eEecCCCccHHHHHHhHCCCCccEEEeCCC
Q 028523           19 GEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDE-AFNYKEEPDLDAALKRYFPEGINIYFENVG   97 (208)
Q Consensus        19 g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~-v~~~~~~~~~~~~~~~~~~~~~d~v~d~~g   97 (208)
                      +.+|||+||+|++|...++.+...|++|+++++++.+..    ..+... ..|..+.    +.+.+... ++|++|++.|
T Consensus         3 ~k~vlVTGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~----~~~~~~~~~Dl~d~----~~~~~~~~-~~D~vi~~Ag   73 (267)
T 3rft_A            3 MKRLLVTGAAGQLGRVMRERLAPMAEILRLADLSPLDPA----GPNEECVQCDLADA----NAVNAMVA-GCDGIVHLGG   73 (267)
T ss_dssp             EEEEEEESTTSHHHHHHHHHTGGGEEEEEEEESSCCCCC----CTTEEEEECCTTCH----HHHHHHHT-TCSEEEECCS
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCcccc----CCCCEEEEcCCCCH----HHHHHHHc-CCCEEEECCC
Confidence            468999999999999999888888999999998865432    111111 2333332    22333222 5999999987


Q ss_pred             c---hhHH-----------HHHHhhcc--CCEEEEEecccc
Q 028523           98 G---KMLD-----------AVLLNMRI--QGRITLCGMISQ  122 (208)
Q Consensus        98 ~---~~~~-----------~~~~~l~~--~G~~v~~g~~~~  122 (208)
                      .   ..+.           ..++.+.+  .++++.+++...
T Consensus        74 ~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~~iv~~SS~~~  114 (267)
T 3rft_A           74 ISVEKPFEQILQGNIIGLYNLYEAARAHGQPRIVFASSNHT  114 (267)
T ss_dssp             CCSCCCHHHHHHHHTHHHHHHHHHHHHTTCCEEEEEEEGGG
T ss_pred             CcCcCCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcchHH
Confidence            3   1111           22223332  369999887543

>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}

Probab=97.27  E-value=0.0028  Score=45.80  Aligned_cols=95  Identities=13%  Similarity=0.046  Sum_probs=65.3

Q ss_pred             CCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHHHHhHCCCCccEEEe
Q 028523           15 SPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFE   94 (208)
Q Consensus        15 ~~~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~d~v~d   94 (208)
                      .++++.+||=.|+  |.|..+..+++. |.+|++++.+++..+.++ +.  ...+   .. +..+.+.....+.||+|+.
T Consensus        38 ~~~~~~~vLDiGc--G~G~~~~~l~~~-~~~v~gvD~s~~~~~~a~-~~--~~~~---~~-d~~~~~~~~~~~~fD~i~~  107 (240)
T 3dli_A           38 YFKGCRRVLDIGC--GRGEFLELCKEE-GIESIGVDINEDMIKFCE-GK--FNVV---KS-DAIEYLKSLPDKYLDGVMI  107 (240)
T ss_dssp             GTTTCSCEEEETC--TTTHHHHHHHHH-TCCEEEECSCHHHHHHHH-TT--SEEE---CS-CHHHHHHTSCTTCBSEEEE
T ss_pred             hhcCCCeEEEEeC--CCCHHHHHHHhC-CCcEEEEECCHHHHHHHH-hh--ccee---ec-cHHHHhhhcCCCCeeEEEE
Confidence            4578899999884  456666666665 889999999999988888 33  1222   22 4444333444457999986


Q ss_pred             CC-----C----chhHHHHHHhhccCCEEEEEec
Q 028523           95 NV-----G----GKMLDAVLLNMRIQGRITLCGM  119 (208)
Q Consensus        95 ~~-----g----~~~~~~~~~~l~~~G~~v~~g~  119 (208)
                      ..     +    ...+..+.+.|+|||.++....
T Consensus       108 ~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~  141 (240)
T 3dli_A          108 SHFVEHLDPERLFELLSLCYSKMKYSSYIVIESP  141 (240)
T ss_dssp             ESCGGGSCGGGHHHHHHHHHHHBCTTCCEEEEEE
T ss_pred             CCchhhCCcHHHHHHHHHHHHHcCCCcEEEEEeC
Confidence            32     2    1357788899999999887543

>3lt0_A Enoyl-ACP reductase; triclosan, triclosan variant, oxidoredu P.falciparum; HET: NAD FT1; 1.96A {Plasmodium falciparum} SCOP: c.2.1.2 PDB: 1v35_A* 3lsy_A* 1uh5_A* 3lt1_A* 3lt2_A* 3lt4_A* 3am4_A* 3am3_A* 3am5_A* 2o2y_A* 2oos_A* 2ol4_A* 2op0_A* 2op1_A* 1vrw_A* 1zsn_A* 1zw1_A* 1zxb_A* 1zxl_A* 2foi_A* ...

Probab=97.27  E-value=0.00054  Score=52.21  Aligned_cols=35  Identities=6%  Similarity=0.023  Sum_probs=30.5

Q ss_pred             CCEEEEecCCc--hHHHHHHHHHHHcCCEEEEEeCCH
Q 028523           19 GEYVFVSAASG--AVGQLVGQFAKLVGCYVVGSAGSK   53 (208)
Q Consensus        19 g~~vli~ga~g--~vG~~a~qla~~~g~~v~~~~~s~   53 (208)
                      ++++||+|+++  |+|.+.++.+...|++|+++++++
T Consensus         2 ~k~~lITGas~~~GIG~aiA~~la~~G~~Vv~~~~~~   38 (329)
T 3lt0_A            2 EDICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPP   38 (329)
T ss_dssp             CCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEECHH
T ss_pred             CcEEEEECCCCCCchHHHHHHHHHHCCCEEEEEecCc
Confidence            67899999875  999999988888999999888665

>3gg9_A D-3-phosphoglycerate dehydrogenase oxidoreductase; structural genomics, PSI-2, P structure initiative; 1.90A {Ralstonia solanacearum}

Probab=97.27  E-value=0.0021  Score=49.39  Aligned_cols=88  Identities=19%  Similarity=0.240  Sum_probs=65.7

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHHHHhHCCCCccEEEeCCC
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVG   97 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~d~v~d~~g   97 (208)
                      .|.+|.|.| .|.+|...++.++..|.+|++.+++. +.+.+. +.|...+     . ++.+.+.+     .|+|+.++.
T Consensus       159 ~g~tvGIIG-lG~IG~~vA~~l~~~G~~V~~~d~~~-~~~~~~-~~g~~~~-----~-~l~ell~~-----aDiV~l~~P  224 (352)
T 3gg9_A          159 KGQTLGIFG-YGKIGQLVAGYGRAFGMNVLVWGREN-SKERAR-ADGFAVA-----E-SKDALFEQ-----SDVLSVHLR  224 (352)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSHH-HHHHHH-HTTCEEC-----S-SHHHHHHH-----CSEEEECCC
T ss_pred             CCCEEEEEe-ECHHHHHHHHHHHhCCCEEEEECCCC-CHHHHH-hcCceEe-----C-CHHHHHhh-----CCEEEEecc
Confidence            578999999 59999999999999999999999775 334455 6676322     1 44444443     799998876


Q ss_pred             -ch-----hHHHHHHhhccCCEEEEEec
Q 028523           98 -GK-----MLDAVLLNMRIQGRITLCGM  119 (208)
Q Consensus        98 -~~-----~~~~~~~~l~~~G~~v~~g~  119 (208)
                       .+     .-...+..|+++..++.++.
T Consensus       225 lt~~t~~li~~~~l~~mk~gailIN~aR  252 (352)
T 3gg9_A          225 LNDETRSIITVADLTRMKPTALFVNTSR  252 (352)
T ss_dssp             CSTTTTTCBCHHHHTTSCTTCEEEECSC
T ss_pred             CcHHHHHhhCHHHHhhCCCCcEEEECCC
Confidence             32     23467888999999999884

>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*

Probab=97.26  E-value=0.00051  Score=52.50  Aligned_cols=92  Identities=16%  Similarity=0.124  Sum_probs=57.7

Q ss_pred             CCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCe-eEecCCCccHHHHHHhHCCCCccEEEeC
Q 028523           17 KQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDE-AFNYKEEPDLDAALKRYFPEGINIYFEN   95 (208)
Q Consensus        17 ~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~-v~~~~~~~~~~~~~~~~~~~~~d~v~d~   95 (208)
                      .++.+|||+||+|.+|..+++.+...|.+|+++++++.+       .+... ..|..+...+.+.+    . ++|+||.+
T Consensus        17 ~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~-------~~~~~~~~Dl~d~~~~~~~~----~-~~d~vih~   84 (347)
T 4id9_A           17 RGSHMILVTGSAGRVGRAVVAALRTQGRTVRGFDLRPSG-------TGGEEVVGSLEDGQALSDAI----M-GVSAVLHL   84 (347)
T ss_dssp             ----CEEEETTTSHHHHHHHHHHHHTTCCEEEEESSCCS-------SCCSEEESCTTCHHHHHHHH----T-TCSEEEEC
T ss_pred             cCCCEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCC-------CCccEEecCcCCHHHHHHHH----h-CCCEEEEC
Confidence            456789999999999999999999999999999988654       12222 23444331222222    2 59999998


Q ss_pred             CCch-----h-----------HHHHHHhhcc--CCEEEEEecc
Q 028523           96 VGGK-----M-----------LDAVLLNMRI--QGRITLCGMI  120 (208)
Q Consensus        96 ~g~~-----~-----------~~~~~~~l~~--~G~~v~~g~~  120 (208)
                      .+..     .           ....++.+..  -++++.++..
T Consensus        85 A~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~V~~SS~  127 (347)
T 4id9_A           85 GAFMSWAPADRDRMFAVNVEGTRRLLDAASAAGVRRFVFASSG  127 (347)
T ss_dssp             CCCCCSSGGGHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEG
T ss_pred             CcccCcchhhHHHHHHHHHHHHHHHHHHHHHcCCCeEEEECCH
Confidence            7621     0           1223444433  2589988873

>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*

Probab=97.25  E-value=0.0044  Score=47.38  Aligned_cols=75  Identities=11%  Similarity=0.131  Sum_probs=49.2

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHH----HHHHHHHhcC----CC-ee--EecCCCccHHHHHHhHCC
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKD----KVDLLKNKFG----FD-EA--FNYKEEPDLDAALKRYFP   86 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~----~~~~~~~~~g----~~-~v--~~~~~~~~~~~~~~~~~~   86 (208)
                      .+.+|||+||+|.+|..+++.+...|.+|++++++..    +.+.+.+.+.    .. .+  .|..+.    +.+.+...
T Consensus        26 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~----~~~~~~~~  101 (352)
T 1sb8_A           26 QPKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNL----DDCNNACA  101 (352)
T ss_dssp             SCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEECCTTSH----HHHHHHHT
T ss_pred             cCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCccchhhHHHHhhhcccccCCceEEEECCCCCH----HHHHHHhc
Confidence            3568999999999999999988888999999998653    3333332221    11 22  233322    22332222


Q ss_pred             CCccEEEeCCC
Q 028523           87 EGINIYFENVG   97 (208)
Q Consensus        87 ~~~d~v~d~~g   97 (208)
                       ++|+||.+.+
T Consensus       102 -~~d~vih~A~  111 (352)
T 1sb8_A          102 -GVDYVLHQAA  111 (352)
T ss_dssp             -TCSEEEECCS
T ss_pred             -CCCEEEECCc
Confidence             5999999987

>3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A*

Probab=97.25  E-value=0.0011  Score=63.46  Aligned_cols=83  Identities=16%  Similarity=0.079  Sum_probs=58.5

Q ss_pred             CCCCCEEEEecCCch-HHHHHHHHHHHcCCEEEEEeCCHHH-----HHHHHHhcCC---Ce---eEecCCCccHHHHHHh
Q 028523           16 PKQGEYVFVSAASGA-VGQLVGQFAKLVGCYVVGSAGSKDK-----VDLLKNKFGF---DE---AFNYKEEPDLDAALKR   83 (208)
Q Consensus        16 ~~~g~~vli~ga~g~-vG~~a~qla~~~g~~v~~~~~s~~~-----~~~~~~~~g~---~~---v~~~~~~~~~~~~~~~   83 (208)
                      .-.|+++||+||++| ||.+.++.+...|++|++++++.++     .+.+.++++.   ..   ..|..+..+..+.+.+
T Consensus      2133 ~l~gKvaLVTGAs~GsIG~AiA~~La~~GA~Vvi~~r~~~~~~~~~~~~l~~~l~~~G~~~~~v~~Dvtd~~~v~~lv~~ 2212 (3089)
T 3zen_D         2133 XXXDEVAVVTGASKGSIAASVVGQLLDGGATVIATTSRLDDDRLAFYKQLYRDHARFDATLWVVPANMASYSDIDKLVEW 2212 (3089)
T ss_dssp             CCCCCEEEEESCCTTSHHHHHHHHHHHTTCEEEEEESCCSHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHHHH
T ss_pred             cCCCCEEEEeCCChhHHHHHHHHHHHHCCCEEEEEeCChhhhhhHHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHH
Confidence            357899999999999 9999999999999999999987665     4444435543   11   2344544244444554


Q ss_pred             HCC------CCccEEEeCCCc
Q 028523           84 YFP------EGINIYFENVGG   98 (208)
Q Consensus        84 ~~~------~~~d~v~d~~g~   98 (208)
                      ...      +++|+++++.|.
T Consensus      2213 i~~~~~~~fG~IDILVNNAGi 2233 (3089)
T 3zen_D         2213 VGTEQTESLGPQSIHLKDAQT 2233 (3089)
T ss_dssp             HTSCCEEEESSSEEEECCCCC
T ss_pred             HHhhhhhhcCCCCEEEECCCc
Confidence            444      378999998874

>2glx_A 1,5-anhydro-D-fructose reductase; NADP(H) dependent reductase, rossmann-fold, sugar metabolism, 1,5-anhydro-D-mannitol, oxidoreductase; HET: NDP; 2.20A {Ensifer adhaerens}

Probab=97.25  E-value=0.027  Score=42.68  Aligned_cols=86  Identities=9%  Similarity=0.071  Sum_probs=55.9

Q ss_pred             EEEEecCCchHHHHH-HHHHHHcCCEEE-EEeCCHHHHHHHHHhcCCCeeEecCCCccHHHHHHhHCCCCccEEEeCCCc
Q 028523           21 YVFVSAASGAVGQLV-GQFAKLVGCYVV-GSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVGG   98 (208)
Q Consensus        21 ~vli~ga~g~vG~~a-~qla~~~g~~v~-~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~d~v~d~~g~   98 (208)
                      +|.|.|+ |.+|... +...+..+.+++ +.++++++.+.+.+++|...++  .   ++.+.+.   ...+|+|+.++..
T Consensus         2 ~vgiiG~-G~~g~~~~~~~l~~~~~~~vav~d~~~~~~~~~~~~~g~~~~~--~---~~~~~l~---~~~~D~V~i~tp~   72 (332)
T 2glx_A            2 RWGLIGA-STIAREWVIGAIRATGGEVVSMMSTSAERGAAYATENGIGKSV--T---SVEELVG---DPDVDAVYVSTTN   72 (332)
T ss_dssp             EEEEESC-CHHHHHTHHHHHHHTTCEEEEEECSCHHHHHHHHHHTTCSCCB--S---CHHHHHT---CTTCCEEEECSCG
T ss_pred             eEEEEcc-cHHHHHhhhHHhhcCCCeEEEEECCCHHHHHHHHHHcCCCccc--C---CHHHHhc---CCCCCEEEEeCCh
Confidence            5788995 9999876 544433778776 4566676766655477764332  1   4444332   1259999999995


Q ss_pred             -hhHHHHHHhhccCCEEE
Q 028523           99 -KMLDAVLLNMRIQGRIT  115 (208)
Q Consensus        99 -~~~~~~~~~l~~~G~~v  115 (208)
                       ...+.+..+|..|-.++
T Consensus        73 ~~h~~~~~~al~~Gk~v~   90 (332)
T 2glx_A           73 ELHREQTLAAIRAGKHVL   90 (332)
T ss_dssp             GGHHHHHHHHHHTTCEEE
T ss_pred             hHhHHHHHHHHHCCCeEE
Confidence             45667777777765543

>1db3_A GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lyase; 2.30A {Escherichia coli} SCOP: c.2.1.2

Probab=97.24  E-value=0.00084  Score=51.74  Aligned_cols=36  Identities=17%  Similarity=0.285  Sum_probs=29.6

Q ss_pred             CEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHH
Q 028523           20 EYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDK   55 (208)
Q Consensus        20 ~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~   55 (208)
                      .+|||+||+|.+|...++.+...|.+|++++++.++
T Consensus         2 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~   37 (372)
T 1db3_A            2 KVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASS   37 (372)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEECC----
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEECCCcc
Confidence            579999999999999998888889999999987654

>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*

Probab=97.24  E-value=0.00059  Score=48.86  Aligned_cols=99  Identities=19%  Similarity=0.152  Sum_probs=66.1

Q ss_pred             CCCCCCEEEEecCCchHHHHHHHHHHHcC--CEEEEEeCCHHHHHHHHHh---cC-----CCeeEecCCCccHHHHHHhH
Q 028523           15 SPKQGEYVFVSAASGAVGQLVGQFAKLVG--CYVVGSAGSKDKVDLLKNK---FG-----FDEAFNYKEEPDLDAALKRY   84 (208)
Q Consensus        15 ~~~~g~~vli~ga~g~vG~~a~qla~~~g--~~v~~~~~s~~~~~~~~~~---~g-----~~~v~~~~~~~~~~~~~~~~   84 (208)
                      .++++++||-.|+ | .|..+..+++..|  .+|++++.++...+.+++.   .|     ...+ ..... +.....  .
T Consensus        74 ~~~~~~~vLDiG~-G-~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~v-~~~~~-d~~~~~--~  147 (226)
T 1i1n_A           74 QLHEGAKALDVGS-G-SGILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDDPTLLSSGRV-QLVVG-DGRMGY--A  147 (226)
T ss_dssp             TSCTTCEEEEETC-T-TSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCTHHHHTSSE-EEEES-CGGGCC--G
T ss_pred             hCCCCCEEEEEcC-C-cCHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhcccccCCCcE-EEEEC-CcccCc--c
Confidence            3788999999984 3 4888888888876  5999999999887776632   22     1111 11111 111100  1


Q ss_pred             CCCCccEEEeCCC-chhHHHHHHhhccCCEEEEEec
Q 028523           85 FPEGINIYFENVG-GKMLDAVLLNMRIQGRITLCGM  119 (208)
Q Consensus        85 ~~~~~d~v~d~~g-~~~~~~~~~~l~~~G~~v~~g~  119 (208)
                      ..+.||+|+.... ...+..+.+.|++||+++..-.
T Consensus       148 ~~~~fD~i~~~~~~~~~~~~~~~~LkpgG~lv~~~~  183 (226)
T 1i1n_A          148 EEAPYDAIHVGAAAPVVPQALIDQLKPGGRLILPVG  183 (226)
T ss_dssp             GGCCEEEEEECSBBSSCCHHHHHTEEEEEEEEEEES
T ss_pred             cCCCcCEEEECCchHHHHHHHHHhcCCCcEEEEEEe
Confidence            1236999987766 4567889999999999887644

>2j6i_A Formate dehydrogenase; oxidoreductase, D-specific-2- hydroxy acid dehydrogenase, cofactor regenerator, yeast, CBFDH; HET: PG4; 1.55A {Candida boidinii} PDB: 2fss_A

Probab=97.24  E-value=0.00097  Score=51.54  Aligned_cols=91  Identities=12%  Similarity=0.056  Sum_probs=65.9

Q ss_pred             CCCCEEEEecCCchHHHHHHHHHHHcCCE-EEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHHHHhHCCCCccEEEeC
Q 028523           17 KQGEYVFVSAASGAVGQLVGQFAKLVGCY-VVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFEN   95 (208)
Q Consensus        17 ~~g~~vli~ga~g~vG~~a~qla~~~g~~-v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~d~v~d~   95 (208)
                      -.|.+|.|.| .|.+|...++.++..|.+ |++.+++..+.+.+. ++|...+     . ++.+.+.     ..|+|+.+
T Consensus       162 l~g~tvgIIG-~G~IG~~vA~~l~~~G~~~V~~~d~~~~~~~~~~-~~g~~~~-----~-~l~ell~-----~aDvV~l~  228 (364)
T 2j6i_A          162 IEGKTIATIG-AGRIGYRVLERLVPFNPKELLYYDYQALPKDAEE-KVGARRV-----E-NIEELVA-----QADIVTVN  228 (364)
T ss_dssp             STTCEEEEEC-CSHHHHHHHHHHGGGCCSEEEEECSSCCCHHHHH-HTTEEEC-----S-SHHHHHH-----TCSEEEEC
T ss_pred             CCCCEEEEEC-cCHHHHHHHHHHHhCCCcEEEEECCCccchhHHH-hcCcEec-----C-CHHHHHh-----cCCEEEEC
Confidence            4688999999 599999999999999997 999998776666565 6764321     1 3444333     37888888


Q ss_pred             CCc-h----hH-HHHHHhhccCCEEEEEecc
Q 028523           96 VGG-K----ML-DAVLLNMRIQGRITLCGMI  120 (208)
Q Consensus        96 ~g~-~----~~-~~~~~~l~~~G~~v~~g~~  120 (208)
                      +.. +    .+ ...+..|++++.++.++..
T Consensus       229 ~P~t~~t~~li~~~~l~~mk~ga~lIn~arG  259 (364)
T 2j6i_A          229 APLHAGTKGLINKELLSKFKKGAWLVNTARG  259 (364)
T ss_dssp             CCCSTTTTTCBCHHHHTTSCTTEEEEECSCG
T ss_pred             CCCChHHHHHhCHHHHhhCCCCCEEEECCCC
Confidence            773 2    22 4567788888888887753

>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17

Probab=97.23  E-value=0.0017  Score=49.09  Aligned_cols=98  Identities=11%  Similarity=0.070  Sum_probs=65.7

Q ss_pred             CCCCEEEEecCCchHHHHHHHHHHHcC-CEEEEEeCCHHHHHHHHHhcCC------CeeEecCCCccHHHHHHhHCCCCc
Q 028523           17 KQGEYVFVSAASGAVGQLVGQFAKLVG-CYVVGSAGSKDKVDLLKNKFGF------DEAFNYKEEPDLDAALKRYFPEGI   89 (208)
Q Consensus        17 ~~g~~vli~ga~g~vG~~a~qla~~~g-~~v~~~~~s~~~~~~~~~~~g~------~~v~~~~~~~~~~~~~~~~~~~~~   89 (208)
                      ..+.+||+.|+  |.|..+..+++..+ .+|++++.+++-.+.+++.+..      +.-+..... +..+.+.. ..+.|
T Consensus       107 ~~~~~VLdIG~--G~G~~~~~l~~~~~~~~v~~vDid~~~i~~Ar~~~~~~~~~~~~~rv~~~~~-D~~~~l~~-~~~~f  182 (314)
T 2b2c_A          107 PDPKRVLIIGG--GDGGILREVLKHESVEKVTMCEIDEMVIDVAKKFLPGMSCGFSHPKLDLFCG-DGFEFLKN-HKNEF  182 (314)
T ss_dssp             SSCCEEEEESC--TTSHHHHHHTTCTTCCEEEEECSCHHHHHHHHHHCTTTSGGGGCTTEEEECS-CHHHHHHH-CTTCE
T ss_pred             CCCCEEEEEcC--CcCHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHHhccccCCCCEEEEEC-hHHHHHHh-cCCCc
Confidence            45689999984  55777788887754 5999999999988888855531      111222223 45444443 34479


Q ss_pred             cEEEeCCC-----------chhHHHHHHhhccCCEEEEEe
Q 028523           90 NIYFENVG-----------GKMLDAVLLNMRIQGRITLCG  118 (208)
Q Consensus        90 d~v~d~~g-----------~~~~~~~~~~l~~~G~~v~~g  118 (208)
                      |+|+....           ...+..+.+.|+++|.++.-.
T Consensus       183 D~Ii~d~~~~~~~~~~l~t~~~l~~~~~~LkpgG~lv~~~  222 (314)
T 2b2c_A          183 DVIITDSSDPVGPAESLFGQSYYELLRDALKEDGILSSQG  222 (314)
T ss_dssp             EEEEECCC-------------HHHHHHHHEEEEEEEEEEC
T ss_pred             eEEEEcCCCCCCcchhhhHHHHHHHHHhhcCCCeEEEEEC
Confidence            99985331           245778899999999998754

>2gcg_A Glyoxylate reductase/hydroxypyruvate reductase; NAD(P) rossmann fold, formate/glycerate dehydrogenase substr binding domain, oxidoreductase; HET: NDP; 2.20A {Homo sapiens} PDB: 2wwr_A 2h1s_A 2q50_A

Probab=97.23  E-value=0.0023  Score=48.78  Aligned_cols=89  Identities=10%  Similarity=0.039  Sum_probs=63.5

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHHHHhHCCCCccEEEeCCC
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVG   97 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~d~v~d~~g   97 (208)
                      .|.+|.|+|. |.+|...++.++..|.+|++.+++.++.+.+. ++|...+       ++.+.+.+     .|+|+.++.
T Consensus       154 ~g~~vgIIG~-G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~-~~g~~~~-------~l~e~l~~-----aDvVi~~vp  219 (330)
T 2gcg_A          154 TQSTVGIIGL-GRIGQAIARRLKPFGVQRFLYTGRQPRPEEAA-EFQAEFV-------STPELAAQ-----SDFIVVACS  219 (330)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHGGGTCCEEEEESSSCCHHHHH-TTTCEEC-------CHHHHHHH-----CSEEEECCC
T ss_pred             CCCEEEEECc-CHHHHHHHHHHHHCCCEEEEECCCCcchhHHH-hcCceeC-------CHHHHHhh-----CCEEEEeCC
Confidence            4778999995 99999999999999999999998776555555 5664221       23333332     789998886


Q ss_pred             c-h----hH-HHHHHhhccCCEEEEEecc
Q 028523           98 G-K----ML-DAVLLNMRIQGRITLCGMI  120 (208)
Q Consensus        98 ~-~----~~-~~~~~~l~~~G~~v~~g~~  120 (208)
                      . +    .+ ...+..|+++..++.++..
T Consensus       220 ~~~~t~~~i~~~~~~~mk~gailIn~srg  248 (330)
T 2gcg_A          220 LTPATEGLCNKDFFQKMKETAVFINISRG  248 (330)
T ss_dssp             CCTTTTTCBSHHHHHHSCTTCEEEECSCG
T ss_pred             CChHHHHhhCHHHHhcCCCCcEEEECCCC
Confidence            3 2    12 4566788888888776553

>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa}

Probab=97.23  E-value=0.0017  Score=55.42  Aligned_cols=81  Identities=19%  Similarity=0.203  Sum_probs=55.8

Q ss_pred             CCCCCEEEEecCCchHHHHHHHHHH-HcCC-EEEEEeCCHH---HH----HHHHHhcCCCe---eEecCCCccHHHHHHh
Q 028523           16 PKQGEYVFVSAASGAVGQLVGQFAK-LVGC-YVVGSAGSKD---KV----DLLKNKFGFDE---AFNYKEEPDLDAALKR   83 (208)
Q Consensus        16 ~~~g~~vli~ga~g~vG~~a~qla~-~~g~-~v~~~~~s~~---~~----~~~~~~~g~~~---v~~~~~~~~~~~~~~~   83 (208)
                      +.++.++||+||+|++|...++.+. ..|+ +|+.++++..   +.    +.++ ..|...   ..|..+.+++.+.+.+
T Consensus       527 ~~~~~~~lItGg~~GlG~aiA~~la~~~Ga~~vvl~~R~~~~~~~~~~~~~~l~-~~G~~v~~~~~Dvsd~~~v~~~~~~  605 (795)
T 3slk_A          527 WDAAGTVLVTGGTGALGAEVARHLVIERGVRNLVLVSRRGPAASGAAELVAQLT-AYGAEVSLQACDVADRETLAKVLAS  605 (795)
T ss_dssp             CCTTSEEEEETTTSHHHHHHHHHHHHTSSCCEEEEEESSGGGSTTHHHHHHHHH-HTTCEEEEEECCTTCHHHHHHHHHT
T ss_pred             cccccceeeccCCCCcHHHHHHHHHHHcCCcEEEEeccCccchHHHHHHHHHHH-hcCCcEEEEEeecCCHHHHHHHHHH
Confidence            4678999999999999999888776 7899 6999998832   22    2333 456542   2355544245455555


Q ss_pred             HCCC-CccEEEeCCC
Q 028523           84 YFPE-GINIYFENVG   97 (208)
Q Consensus        84 ~~~~-~~d~v~d~~g   97 (208)
                      .... ++|.+|++.|
T Consensus       606 ~~~~~~id~lVnnAG  620 (795)
T 3slk_A          606 IPDEHPLTAVVHAAG  620 (795)
T ss_dssp             SCTTSCEEEEEECCC
T ss_pred             HHHhCCCEEEEECCC
Confidence            4433 7999999987

>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}

Probab=97.23  E-value=0.0052  Score=43.78  Aligned_cols=77  Identities=6%  Similarity=-0.069  Sum_probs=55.1

Q ss_pred             EEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHHHHhHCCCCccEEEeCCCchh
Q 028523           21 YVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVGGKM  100 (208)
Q Consensus        21 ~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~  100 (208)
                      +|+|.|+ |.+|...++.+...|.+|+++++++++.+.+.+.+|...+ ..+.. + .+.+++..-.++|+++-+++.+.
T Consensus         2 ~iiIiG~-G~~G~~la~~L~~~g~~v~vid~~~~~~~~l~~~~~~~~i-~gd~~-~-~~~l~~a~i~~ad~vi~~~~~d~   77 (218)
T 3l4b_C            2 KVIIIGG-ETTAYYLARSMLSRKYGVVIINKDRELCEEFAKKLKATII-HGDGS-H-KEILRDAEVSKNDVVVILTPRDE   77 (218)
T ss_dssp             CEEEECC-HHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHHSSSEEE-ESCTT-S-HHHHHHHTCCTTCEEEECCSCHH
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHcCCeEE-EcCCC-C-HHHHHhcCcccCCEEEEecCCcH
Confidence            4889996 9999999999999999999999999988877645665432 22211 2 23344433336999999999654


Q ss_pred             H
Q 028523          101 L  101 (208)
Q Consensus       101 ~  101 (208)
                      .
T Consensus        78 ~   78 (218)
T 3l4b_C           78 V   78 (218)
T ss_dssp             H
T ss_pred             H
Confidence            3

>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica}

Probab=97.22  E-value=0.00041  Score=52.80  Aligned_cols=101  Identities=14%  Similarity=0.093  Sum_probs=60.3

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHH-HHHHHhcCCCee--EecCCCccHHHHHHhHCCCCccEEEe
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKV-DLLKNKFGFDEA--FNYKEEPDLDAALKRYFPEGINIYFE   94 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~-~~~~~~~g~~~v--~~~~~~~~~~~~~~~~~~~~~d~v~d   94 (208)
                      .+.+|||+||+|.+|..+++.+...|.+|++++++.... +.+. .+....+  .|..+...+.+.+..   .++|+||+
T Consensus        20 ~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~l~-~~~~~~~~~~Dl~d~~~~~~~~~~---~~~D~vih   95 (333)
T 2q1w_A           20 HMKKVFITGICGQIGSHIAELLLERGDKVVGIDNFATGRREHLK-DHPNLTFVEGSIADHALVNQLIGD---LQPDAVVH   95 (333)
T ss_dssp             -CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGSC-CCTTEEEEECCTTCHHHHHHHHHH---HCCSEEEE
T ss_pred             CCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCCccchhhHh-hcCCceEEEEeCCCHHHHHHHHhc---cCCcEEEE
Confidence            467899999999999999988888899999999875421 1111 1111122  233332122222322   25999999


Q ss_pred             CCCc-hh--------------HHHHHHhhcc-C-CEEEEEecccc
Q 028523           95 NVGG-KM--------------LDAVLLNMRI-Q-GRITLCGMISQ  122 (208)
Q Consensus        95 ~~g~-~~--------------~~~~~~~l~~-~-G~~v~~g~~~~  122 (208)
                      +.+. ..              ....++.+.+ + ++++.++....
T Consensus        96 ~A~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~~iV~~SS~~~  140 (333)
T 2q1w_A           96 TAASYKDPDDWYNDTLTNCVGGSNVVQAAKKNNVGRFVYFQTALC  140 (333)
T ss_dssp             CCCCCSCTTCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEGGG
T ss_pred             CceecCCCccCChHHHHHHHHHHHHHHHHHHhCCCEEEEECcHHH
Confidence            9872 11              1223333333 3 68998886543

>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*

Probab=97.22  E-value=0.00092  Score=50.45  Aligned_cols=91  Identities=12%  Similarity=0.122  Sum_probs=57.6

Q ss_pred             CEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHH-HHHHHH--HhcCCCe-eEecCCCccHHHHHHhHCCCCccEEEeC
Q 028523           20 EYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKD-KVDLLK--NKFGFDE-AFNYKEEPDLDAALKRYFPEGINIYFEN   95 (208)
Q Consensus        20 ~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~-~~~~~~--~~~g~~~-v~~~~~~~~~~~~~~~~~~~~~d~v~d~   95 (208)
                      .+|+|+||+|.+|...++.+...|.+|++++|++. +.+.+.  +..|... ..|..+.    +.+.+... ++|.||.+
T Consensus        12 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~l~~~~v~~v~~Dl~d~----~~l~~a~~-~~d~vi~~   86 (318)
T 2r6j_A           12 SKILIFGGTGYIGNHMVKGSLKLGHPTYVFTRPNSSKTTLLDEFQSLGAIIVKGELDEH----EKLVELMK-KVDVVISA   86 (318)
T ss_dssp             CCEEEETTTSTTHHHHHHHHHHTTCCEEEEECTTCSCHHHHHHHHHTTCEEEECCTTCH----HHHHHHHT-TCSEEEEC
T ss_pred             CeEEEECCCchHHHHHHHHHHHCCCcEEEEECCCCchhhHHHHhhcCCCEEEEecCCCH----HHHHHHHc-CCCEEEEC
Confidence            47999999999999999988888999999998864 333322  0335432 2344433    22232222 59999999


Q ss_pred             CCch---hHHHHHHhhcc-C--CEEE
Q 028523           96 VGGK---MLDAVLLNMRI-Q--GRIT  115 (208)
Q Consensus        96 ~g~~---~~~~~~~~l~~-~--G~~v  115 (208)
                      .+..   .....++.+.. +  ++++
T Consensus        87 a~~~~~~~~~~l~~aa~~~g~v~~~v  112 (318)
T 2r6j_A           87 LAFPQILDQFKILEAIKVAGNIKRFL  112 (318)
T ss_dssp             CCGGGSTTHHHHHHHHHHHCCCCEEE
T ss_pred             CchhhhHHHHHHHHHHHhcCCCCEEE
Confidence            8842   23344444443 2  4666

>3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032}

Probab=97.22  E-value=0.0023  Score=48.35  Aligned_cols=96  Identities=8%  Similarity=0.055  Sum_probs=66.0

Q ss_pred             EEEEecCCchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHhcCCC--eeEecCCCccHHHHHHhHCCCCccEEEeCCC
Q 028523           21 YVFVSAASGAVGQLVGQFAKLV-GCYVVGSAGSKDKVDLLKNKFGFD--EAFNYKEEPDLDAALKRYFPEGINIYFENVG   97 (208)
Q Consensus        21 ~vli~ga~g~vG~~a~qla~~~-g~~v~~~~~s~~~~~~~~~~~g~~--~v~~~~~~~~~~~~~~~~~~~~~d~v~d~~g   97 (208)
                      +||++|+  |.|..+..+++.. +.+|+++..+++-.+.+++.++..  .-+..... +..+.+.+...+.||+||-...
T Consensus        92 rVLdIG~--G~G~la~~la~~~p~~~v~~VEidp~vi~~Ar~~~~~~~~~rv~v~~~-Da~~~l~~~~~~~fDvIi~D~~  168 (317)
T 3gjy_A           92 RITHLGG--GACTMARYFADVYPQSRNTVVELDAELARLSREWFDIPRAPRVKIRVD-DARMVAESFTPASRDVIIRDVF  168 (317)
T ss_dssp             EEEEESC--GGGHHHHHHHHHSTTCEEEEEESCHHHHHHHHHHSCCCCTTTEEEEES-CHHHHHHTCCTTCEEEEEECCS
T ss_pred             EEEEEEC--CcCHHHHHHHHHCCCcEEEEEECCHHHHHHHHHhccccCCCceEEEEC-cHHHHHhhccCCCCCEEEECCC
Confidence            8999984  5678888888854 679999999999889888666532  11111122 5555555443447999875321


Q ss_pred             -----------chhHHHHHHhhccCCEEEEEec
Q 028523           98 -----------GKMLDAVLLNMRIQGRITLCGM  119 (208)
Q Consensus        98 -----------~~~~~~~~~~l~~~G~~v~~g~  119 (208)
                                 .+.+..+.+.|+++|.++....
T Consensus       169 ~~~~~~~~L~t~efl~~~~r~LkpgGvlv~~~~  201 (317)
T 3gjy_A          169 AGAITPQNFTTVEFFEHCHRGLAPGGLYVANCG  201 (317)
T ss_dssp             TTSCCCGGGSBHHHHHHHHHHEEEEEEEEEEEE
T ss_pred             CccccchhhhHHHHHHHHHHhcCCCcEEEEEec
Confidence                       1347888999999999876544

>3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0

Probab=97.22  E-value=0.00076  Score=50.06  Aligned_cols=83  Identities=7%  Similarity=0.072  Sum_probs=53.7

Q ss_pred             EEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHHHHhHCCCCccEEEeCCCchh
Q 028523           21 YVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVGGKM  100 (208)
Q Consensus        21 ~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~  100 (208)
                      +|||+||+|.+|...++.+...|.+|+++++.+               .|..+.+.+.+.+.+.   ++|+||++.+...
T Consensus         7 ~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~---------------~D~~d~~~~~~~~~~~---~~d~vi~~a~~~~   68 (287)
T 3sc6_A            7 RVIITGANGQLGKQLQEELNPEEYDIYPFDKKL---------------LDITNISQVQQVVQEI---RPHIIIHCAAYTK   68 (287)
T ss_dssp             EEEEESTTSHHHHHHHHHSCTTTEEEEEECTTT---------------SCTTCHHHHHHHHHHH---CCSEEEECCCCCC
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCEEEEecccc---------------cCCCCHHHHHHHHHhc---CCCEEEECCcccC
Confidence            799999999999999988888899999999721               1222221233333322   5889998876211


Q ss_pred             ------------------HHHHHHhhc-cCCEEEEEeccc
Q 028523          101 ------------------LDAVLLNMR-IQGRITLCGMIS  121 (208)
Q Consensus       101 ------------------~~~~~~~l~-~~G~~v~~g~~~  121 (208)
                                        ....++.+. .+.+++.++...
T Consensus        69 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~v~~SS~~  108 (287)
T 3sc6_A           69 VDQAEKERDLAYVINAIGARNVAVASQLVGAKLVYISTDY  108 (287)
T ss_dssp             HHHHTTCHHHHHHHHTHHHHHHHHHHHHHTCEEEEEEEGG
T ss_pred             hHHHhcCHHHHHHHHHHHHHHHHHHHHHcCCeEEEEchhh
Confidence                              122333333 366888887653

>3m4x_A NOL1/NOP2/SUN family protein; mtase domain, PUA domain, RRM motif, transferase; 2.28A {Enterococcus faecium}

Probab=97.20  E-value=0.0059  Score=48.58  Aligned_cols=103  Identities=17%  Similarity=0.231  Sum_probs=66.9

Q ss_pred             HhcCCCCCCEEEEecCCchHHHHHHHHHHHcC--CEEEEEeCCHHHHHHHHH---hcCCCeeEecCCCccHHHHHHhHCC
Q 028523           12 EVCSPKQGEYVFVSAASGAVGQLVGQFAKLVG--CYVVGSAGSKDKVDLLKN---KFGFDEAFNYKEEPDLDAALKRYFP   86 (208)
Q Consensus        12 ~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g--~~v~~~~~s~~~~~~~~~---~~g~~~v~~~~~~~~~~~~~~~~~~   86 (208)
                      ....+++|++||=.|+  +.|..+++++..++  .+|++++.++++.+.+++   .+|...+.-.. . +..... ...+
T Consensus        99 ~~L~~~~g~~VLDlca--GpGgkt~~lA~~~~~~g~V~AvDis~~rl~~~~~n~~r~g~~nv~v~~-~-Da~~l~-~~~~  173 (456)
T 3m4x_A           99 TAAAAKPGEKVLDLCA--APGGKSTQLAAQMKGKGLLVTNEIFPKRAKILSENIERWGVSNAIVTN-H-APAELV-PHFS  173 (456)
T ss_dssp             HHHCCCTTCEEEESSC--TTCHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHTCSSEEEEC-C-CHHHHH-HHHT
T ss_pred             HHcCCCCCCEEEEECC--CcCHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHcCCCceEEEe-C-CHHHhh-hhcc
Confidence            3456889999887764  44666677777653  499999999998877654   45665332222 2 333222 2223


Q ss_pred             CCccEEEe---CCC-c-------------------------hhHHHHHHhhccCCEEEEEec
Q 028523           87 EGINIYFE---NVG-G-------------------------KMLDAVLLNMRIQGRITLCGM  119 (208)
Q Consensus        87 ~~~d~v~d---~~g-~-------------------------~~~~~~~~~l~~~G~~v~~g~  119 (208)
                      +.||.|+-   |.| +                         ..+..++++|++||+++....
T Consensus       174 ~~FD~Il~DaPCSg~G~~rr~p~~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvYsTC  235 (456)
T 3m4x_A          174 GFFDRIVVDAPCSGEGMFRKDPNAIKEWTEESPLYCQKRQQEILSSAIKMLKNKGQLIYSTC  235 (456)
T ss_dssp             TCEEEEEEECCCCCGGGTTTCHHHHHHCCTTHHHHHHHHHHHHHHHHHHTEEEEEEEEEEES
T ss_pred             ccCCEEEECCCCCCccccccCHHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEEe
Confidence            47999975   444 2                         246778889999999987544

>4hy3_A Phosphoglycerate oxidoreductase; PSI-biology, structural genomics, protein structure initiati acid transport and metabolism, NAD binding domain.; 2.80A {Rhizobium etli}

Probab=97.20  E-value=0.0021  Score=49.54  Aligned_cols=87  Identities=13%  Similarity=0.120  Sum_probs=63.0

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHHHHhHCCCCccEEEeCCC
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVG   97 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~d~v~d~~g   97 (208)
                      .|.+|.|.| .|.+|...++.++.+|.+|++.+++. +.+.+. +.|...    .   ++.+.+.     ..|+|+.++.
T Consensus       175 ~gktvGIIG-lG~IG~~vA~~l~~fG~~V~~~d~~~-~~~~~~-~~g~~~----~---~l~ell~-----~aDvV~l~~P  239 (365)
T 4hy3_A          175 AGSEIGIVG-FGDLGKALRRVLSGFRARIRVFDPWL-PRSMLE-ENGVEP----A---SLEDVLT-----KSDFIFVVAA  239 (365)
T ss_dssp             SSSEEEEEC-CSHHHHHHHHHHTTSCCEEEEECSSS-CHHHHH-HTTCEE----C---CHHHHHH-----SCSEEEECSC
T ss_pred             CCCEEEEec-CCcccHHHHHhhhhCCCEEEEECCCC-CHHHHh-hcCeee----C---CHHHHHh-----cCCEEEEcCc
Confidence            478999999 59999999999999999999999775 334444 566531    1   4444443     2788888766


Q ss_pred             -ch-----hHHHHHHhhccCCEEEEEec
Q 028523           98 -GK-----MLDAVLLNMRIQGRITLCGM  119 (208)
Q Consensus        98 -~~-----~~~~~~~~l~~~G~~v~~g~  119 (208)
                       .+     .-...+..|++++.++.++.
T Consensus       240 lt~~T~~li~~~~l~~mk~gailIN~aR  267 (365)
T 4hy3_A          240 VTSENKRFLGAEAFSSMRRGAAFILLSR  267 (365)
T ss_dssp             SSCC---CCCHHHHHTSCTTCEEEECSC
T ss_pred             CCHHHHhhcCHHHHhcCCCCcEEEECcC
Confidence             22     22567788888888888873

>2nac_A NAD-dependent formate dehydrogenase; oxidoreductase(aldehyde(D),NAD+(A)); 1.80A {Pseudomonas SP} SCOP: c.2.1.4 c.23.12.1 PDB: 2nad_A* 2go1_A 2gug_A* 2gsd_A* 3fn4_A

Probab=97.20  E-value=0.0014  Score=51.02  Aligned_cols=91  Identities=12%  Similarity=-0.015  Sum_probs=63.6

Q ss_pred             CCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHHHHhHCCCCccEEEeCC
Q 028523           17 KQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENV   96 (208)
Q Consensus        17 ~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~d~v~d~~   96 (208)
                      -.|.+|.|+| .|.+|...++.++..|.+|++.+++....+... ++|....     . ++.+.+.     ..|+|+.++
T Consensus       189 l~gktvGIIG-lG~IG~~vA~~l~a~G~~V~~~d~~~~~~~~~~-~~G~~~~-----~-~l~ell~-----~aDvV~l~~  255 (393)
T 2nac_A          189 LEAMHVGTVA-AGRIGLAVLRRLAPFDVHLHYTDRHRLPESVEK-ELNLTWH-----A-TREDMYP-----VCDVVTLNC  255 (393)
T ss_dssp             CTTCEEEEEC-CSHHHHHHHHHHGGGTCEEEEECSSCCCHHHHH-HHTCEEC-----S-SHHHHGG-----GCSEEEECS
T ss_pred             CCCCEEEEEe-ECHHHHHHHHHHHhCCCEEEEEcCCccchhhHh-hcCceec-----C-CHHHHHh-----cCCEEEEec
Confidence            3688999999 599999999999999999999998765555555 6675321     1 3333222     268888877


Q ss_pred             C-ch----hH-HHHHHhhccCCEEEEEecc
Q 028523           97 G-GK----ML-DAVLLNMRIQGRITLCGMI  120 (208)
Q Consensus        97 g-~~----~~-~~~~~~l~~~G~~v~~g~~  120 (208)
                      . .+    .+ ...+..|+++..++.++..
T Consensus       256 Plt~~t~~li~~~~l~~mk~gailIN~aRG  285 (393)
T 2nac_A          256 PLHPETEHMINDETLKLFKRGAYIVNTARG  285 (393)
T ss_dssp             CCCTTTTTCBSHHHHTTSCTTEEEEECSCG
T ss_pred             CCchHHHHHhhHHHHhhCCCCCEEEECCCc
Confidence            6 22    12 4566778887777777653

>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A

Probab=97.20  E-value=0.00085  Score=51.25  Aligned_cols=100  Identities=20%  Similarity=0.147  Sum_probs=66.3

Q ss_pred             CCCCCCEEEEecCCchHHHHHHHHHHHcC-CEEEEEeCCHHHHHHHHHhc-----CC-CeeEecCCCccHHHHHHhHCCC
Q 028523           15 SPKQGEYVFVSAASGAVGQLVGQFAKLVG-CYVVGSAGSKDKVDLLKNKF-----GF-DEAFNYKEEPDLDAALKRYFPE   87 (208)
Q Consensus        15 ~~~~g~~vli~ga~g~vG~~a~qla~~~g-~~v~~~~~s~~~~~~~~~~~-----g~-~~v~~~~~~~~~~~~~~~~~~~   87 (208)
                      ....+.+||..|+  |.|..+..+++..+ .+|++++.+++-.+.+++.+     |. +.-+..... +..+.+.....+
T Consensus       117 ~~~~~~~VLdIG~--G~G~~a~~la~~~~~~~V~~VDis~~~l~~Ar~~~~~~~~gl~~~rv~~~~~-D~~~~l~~~~~~  193 (334)
T 1xj5_A          117 SIPNPKKVLVIGG--GDGGVLREVARHASIEQIDMCEIDKMVVDVSKQFFPDVAIGYEDPRVNLVIG-DGVAFLKNAAEG  193 (334)
T ss_dssp             TSSCCCEEEEETC--SSSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGSTTEEEEES-CHHHHHHTSCTT
T ss_pred             hCCCCCEEEEECC--CccHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEEC-CHHHHHHhccCC
Confidence            4466789999984  45777888888764 59999999999888877433     11 111111122 555444433334


Q ss_pred             CccEEEeCCC-----------chhHHHHHHhhccCCEEEEE
Q 028523           88 GINIYFENVG-----------GKMLDAVLLNMRIQGRITLC  117 (208)
Q Consensus        88 ~~d~v~d~~g-----------~~~~~~~~~~l~~~G~~v~~  117 (208)
                      .||+|+-...           ...+..+.+.|++||.++.-
T Consensus       194 ~fDlIi~d~~~p~~~~~~l~~~~~l~~~~~~LkpgG~lv~~  234 (334)
T 1xj5_A          194 SYDAVIVDSSDPIGPAKELFEKPFFQSVARALRPGGVVCTQ  234 (334)
T ss_dssp             CEEEEEECCCCTTSGGGGGGSHHHHHHHHHHEEEEEEEEEE
T ss_pred             CccEEEECCCCccCcchhhhHHHHHHHHHHhcCCCcEEEEe
Confidence            7999985321           13577889999999999875

>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18

Probab=97.19  E-value=0.0041  Score=46.37  Aligned_cols=98  Identities=6%  Similarity=-0.016  Sum_probs=67.2

Q ss_pred             CCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHh---cCCC---eeEecCCCccHHHHHHhHCCCC
Q 028523           15 SPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNK---FGFD---EAFNYKEEPDLDAALKRYFPEG   88 (208)
Q Consensus        15 ~~~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~---~g~~---~v~~~~~~~~~~~~~~~~~~~~   88 (208)
                      .+.++.+||-.|+  |.|..+..+++..|++|++++.++...+.+++.   .|..   .++..    ++.+ + ...++.
T Consensus        79 ~~~~~~~vLDiGc--G~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~----d~~~-~-~~~~~~  150 (297)
T 2o57_A           79 VLQRQAKGLDLGA--GYGGAARFLVRKFGVSIDCLNIAPVQNKRNEEYNNQAGLADNITVKYG----SFLE-I-PCEDNS  150 (297)
T ss_dssp             CCCTTCEEEEETC--TTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHHTCTTTEEEEEC----CTTS-C-SSCTTC
T ss_pred             CCCCCCEEEEeCC--CCCHHHHHHHHHhCCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEEc----Cccc-C-CCCCCC
Confidence            7889999999984  468888888888889999999999877776632   2332   12211    1110 0 111236


Q ss_pred             ccEEEeCCC-------chhHHHHHHhhccCCEEEEEecc
Q 028523           89 INIYFENVG-------GKMLDAVLLNMRIQGRITLCGMI  120 (208)
Q Consensus        89 ~d~v~d~~g-------~~~~~~~~~~l~~~G~~v~~g~~  120 (208)
                      ||+|+....       ...+..+.+.|+|||+++.....
T Consensus       151 fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~  189 (297)
T 2o57_A          151 YDFIWSQDAFLHSPDKLKVFQECARVLKPRGVMAITDPM  189 (297)
T ss_dssp             EEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEEE
T ss_pred             EeEEEecchhhhcCCHHHHHHHHHHHcCCCeEEEEEEec
Confidence            999986433       13578899999999999877543

>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A

Probab=97.19  E-value=0.0014  Score=47.23  Aligned_cols=99  Identities=10%  Similarity=0.107  Sum_probs=64.6

Q ss_pred             cCCCCCCEEEEecCCchHHHHHHHHHHHcC-CEEEEEeCCHHHHHHHHHhcCC-Ce--eEecCCCccHHHHHHhHCCCCc
Q 028523           14 CSPKQGEYVFVSAASGAVGQLVGQFAKLVG-CYVVGSAGSKDKVDLLKNKFGF-DE--AFNYKEEPDLDAALKRYFPEGI   89 (208)
Q Consensus        14 ~~~~~g~~vli~ga~g~vG~~a~qla~~~g-~~v~~~~~s~~~~~~~~~~~g~-~~--v~~~~~~~~~~~~~~~~~~~~~   89 (208)
                      ..++++++||-.|+ | .|..+..+++..| .+|++++.+++..+.+++.... +.  .+..+-. +... .... .+.+
T Consensus        70 ~~~~~~~~VLDlGc-G-~G~~~~~la~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~v~~~~~d~~-~~~~-~~~~-~~~~  144 (230)
T 1fbn_A           70 MPIKRDSKILYLGA-S-AGTTPSHVADIADKGIVYAIEYAPRIMRELLDACAERENIIPILGDAN-KPQE-YANI-VEKV  144 (230)
T ss_dssp             CCCCTTCEEEEESC-C-SSHHHHHHHHHTTTSEEEEEESCHHHHHHHHHHTTTCTTEEEEECCTT-CGGG-GTTT-SCCE
T ss_pred             cCCCCCCEEEEEcc-c-CCHHHHHHHHHcCCcEEEEEECCHHHHHHHHHHhhcCCCeEEEECCCC-Cccc-cccc-CccE
Confidence            45678999999984 4 3888888998876 5999999999888777643321 11  1111111 1000 0011 1369


Q ss_pred             cEEEeCCCch-----hHHHHHHhhccCCEEEEE
Q 028523           90 NIYFENVGGK-----MLDAVLLNMRIQGRITLC  117 (208)
Q Consensus        90 d~v~d~~g~~-----~~~~~~~~l~~~G~~v~~  117 (208)
                      |+|+.....+     .+..+.+.|+|||+++..
T Consensus       145 D~v~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~  177 (230)
T 1fbn_A          145 DVIYEDVAQPNQAEILIKNAKWFLKKGGYGMIA  177 (230)
T ss_dssp             EEEEECCCSTTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred             EEEEEecCChhHHHHHHHHHHHhCCCCcEEEEE
Confidence            9999655422     377888899999999886

>4ggo_A Trans-2-enoyl-COA reductase; rossmann fold, oxidoreductase; 2.00A {Treponema denticola atcc 35405} PDB: 4ggp_A

Probab=97.18  E-value=0.001  Score=51.52  Aligned_cols=82  Identities=13%  Similarity=0.051  Sum_probs=50.9

Q ss_pred             CCCCCEEEEecCCchHHHHH-HHHHHHcCCEEEEEeCCHHH----------------HHHHHHhcCCCe-eE--ecCCCc
Q 028523           16 PKQGEYVFVSAASGAVGQLV-GQFAKLVGCYVVGSAGSKDK----------------VDLLKNKFGFDE-AF--NYKEEP   75 (208)
Q Consensus        16 ~~~g~~vli~ga~g~vG~~a-~qla~~~g~~v~~~~~s~~~----------------~~~~~~~~g~~~-v~--~~~~~~   75 (208)
                      ...++++||+||++|+|++. +.+|...|+.++++.+..+.                .+.++ +.|... .+  |..+.+
T Consensus        47 ~~~pK~vLVtGaSsGiGlA~AialAf~~GA~vi~v~~~~~~~~~~~atag~~~~~a~~~~i~-~~G~~a~~i~~Dv~d~e  125 (401)
T 4ggo_A           47 AKAPKNVLVLGCSNGYGLASRITAAFGYGAATIGVSFEKAGSETKYGTPGWYNNLAFDEAAK-REGLYSVTIDGDAFSDE  125 (401)
T ss_dssp             SCCCCEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHH-HHTCCEEEEESCTTSHH
T ss_pred             cCCCCEEEEECCCCcHHHHHHHHHHhhCCCCEEEEecCCcccccccccccchhHHHHHHHHH-HcCCCceeEeCCCCCHH
Confidence            35678999999999999975 56666789998888754321                13344 556543 23  323221


Q ss_pred             cHHHHHHhH--CCCCccEEEeCCCc
Q 028523           76 DLDAALKRY--FPEGINIYFENVGG   98 (208)
Q Consensus        76 ~~~~~~~~~--~~~~~d~v~d~~g~   98 (208)
                      ...+.+.+.  ..+++|+++.+++.
T Consensus       126 ~i~~vi~~i~~~~G~IDiLVhS~A~  150 (401)
T 4ggo_A          126 IKAQVIEEAKKKGIKFDLIVYSLAS  150 (401)
T ss_dssp             HHHHHHHHHHHTTCCEEEEEECCCC
T ss_pred             HHHHHHHHHHHhcCCCCEEEEeccc
Confidence            222223322  23479999998873

>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*

Probab=97.17  E-value=0.0016  Score=49.02  Aligned_cols=100  Identities=12%  Similarity=0.027  Sum_probs=65.8

Q ss_pred             CCCCCEEEEecCCchHHHHHHHHHHHcC-CEEEEEeCCHHHHHHHHHhcC-------CCeeEecCCCccHHHHHHhHCCC
Q 028523           16 PKQGEYVFVSAASGAVGQLVGQFAKLVG-CYVVGSAGSKDKVDLLKNKFG-------FDEAFNYKEEPDLDAALKRYFPE   87 (208)
Q Consensus        16 ~~~g~~vli~ga~g~vG~~a~qla~~~g-~~v~~~~~s~~~~~~~~~~~g-------~~~v~~~~~~~~~~~~~~~~~~~   87 (208)
                      .+++.+||+.|+  |.|..+..+++..+ .+|++++.+++-.+.+++.+.       ...+ ..... +..+.+.....+
T Consensus        93 ~~~~~~VLdiG~--G~G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v-~~~~~-D~~~~~~~~~~~  168 (304)
T 3bwc_A           93 HPKPERVLIIGG--GDGGVLREVLRHGTVEHCDLVDIDGEVMEQSKQHFPQISRSLADPRA-TVRVG-DGLAFVRQTPDN  168 (304)
T ss_dssp             SSSCCEEEEEEC--TTSHHHHHHHTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTE-EEEES-CHHHHHHSSCTT
T ss_pred             CCCCCeEEEEcC--CCCHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcE-EEEEC-cHHHHHHhccCC
Confidence            467789999984  45777778887654 599999999988887774331       1111 11112 444444322234


Q ss_pred             CccEEEeCCC-----------chhHHHHHHhhccCCEEEEEec
Q 028523           88 GINIYFENVG-----------GKMLDAVLLNMRIQGRITLCGM  119 (208)
Q Consensus        88 ~~d~v~d~~g-----------~~~~~~~~~~l~~~G~~v~~g~  119 (208)
                      .||+|+-...           .+.+..+.+.|++||.++....
T Consensus       169 ~fDvIi~d~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~  211 (304)
T 3bwc_A          169 TYDVVIIDTTDPAGPASKLFGEAFYKDVLRILKPDGICCNQGE  211 (304)
T ss_dssp             CEEEEEEECC---------CCHHHHHHHHHHEEEEEEEEEEEC
T ss_pred             ceeEEEECCCCccccchhhhHHHHHHHHHHhcCCCcEEEEecC
Confidence            7999986332           2457788999999999988643

>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*

Probab=97.16  E-value=0.0063  Score=46.05  Aligned_cols=88  Identities=10%  Similarity=0.100  Sum_probs=62.7

Q ss_pred             CEEEEecCCchHHHHHHHHHHHcCC--EEEEEeCCHHHHHHHHHhcCCC-eeEecCCCccHHH-HHHhHCCCCccEEEeC
Q 028523           20 EYVFVSAASGAVGQLVGQFAKLVGC--YVVGSAGSKDKVDLLKNKFGFD-EAFNYKEEPDLDA-ALKRYFPEGINIYFEN   95 (208)
Q Consensus        20 ~~vli~ga~g~vG~~a~qla~~~g~--~v~~~~~s~~~~~~~~~~~g~~-~v~~~~~~~~~~~-~~~~~~~~~~d~v~d~   95 (208)
                      .+|.|+| .|.+|...++.++..|.  +|++.++++++.+.+. +.|.. ...+     +..+ .+.     ..|+||.|
T Consensus        34 ~kI~IIG-~G~mG~slA~~l~~~G~~~~V~~~dr~~~~~~~a~-~~G~~~~~~~-----~~~~~~~~-----~aDvVila  101 (314)
T 3ggo_A           34 QNVLIVG-VGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAV-DLGIIDEGTT-----SIAKVEDF-----SPDFVMLS  101 (314)
T ss_dssp             SEEEEES-CSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHH-HTTSCSEEES-----CTTGGGGG-----CCSEEEEC
T ss_pred             CEEEEEe-eCHHHHHHHHHHHhCCCCCEEEEEECCHHHHHHHH-HCCCcchhcC-----CHHHHhhc-----cCCEEEEe
Confidence            6799999 59999999999999998  9999999999998888 78863 2221     1111 111     48999999


Q ss_pred             CCchhH----HHHHHhhccCCEEEEEec
Q 028523           96 VGGKML----DAVLLNMRIQGRITLCGM  119 (208)
Q Consensus        96 ~g~~~~----~~~~~~l~~~G~~v~~g~  119 (208)
                      +.....    ......++++..++.++.
T Consensus       102 vp~~~~~~vl~~l~~~l~~~~iv~d~~S  129 (314)
T 3ggo_A          102 SPVRTFREIAKKLSYILSEDATVTDQGS  129 (314)
T ss_dssp             SCGGGHHHHHHHHHHHSCTTCEEEECCS
T ss_pred             CCHHHHHHHHHHHhhccCCCcEEEECCC
Confidence            985433    344455666666666554

>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*

Probab=97.16  E-value=0.00044  Score=53.65  Aligned_cols=73  Identities=15%  Similarity=0.153  Sum_probs=48.4

Q ss_pred             CCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCe-eEecCCCccHHHHHHhHCCCCccEEEeCCC
Q 028523           19 GEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDE-AFNYKEEPDLDAALKRYFPEGINIYFENVG   97 (208)
Q Consensus        19 g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~-v~~~~~~~~~~~~~~~~~~~~~d~v~d~~g   97 (208)
                      +.+|||+||+|.+|...++.+...|++|+++++++.+..... ..+... ..|..+.    +.+.+... ++|+||.+.+
T Consensus        29 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~v~~~~~Dl~d~----~~~~~~~~-~~d~Vih~A~  102 (379)
T 2c5a_A           29 NLKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHMTED-MFCDEFHLVDLRVM----ENCLKVTE-GVDHVFNLAA  102 (379)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCSSSCGG-GTCSEEEECCTTSH----HHHHHHHT-TCSEEEECCC
T ss_pred             CCeEEEECCccHHHHHHHHHHHHCCCeEEEEECCCccchhhc-cCCceEEECCCCCH----HHHHHHhC-CCCEEEECce
Confidence            468999999999999999988888999999998765432221 112221 2233332    12222222 5999999987

>1u7z_A Coenzyme A biosynthesis bifunctional protein coabc; ligase; HET: PMT; 2.30A {Escherichia coli} SCOP: c.72.3.1 PDB: 1u7w_A* 1u7u_A* 1u80_A*

Probab=97.16  E-value=0.00092  Score=47.95  Aligned_cols=74  Identities=16%  Similarity=0.183  Sum_probs=50.3

Q ss_pred             CCCEEEEecC----------------CchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHHH
Q 028523           18 QGEYVFVSAA----------------SGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAAL   81 (208)
Q Consensus        18 ~g~~vli~ga----------------~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~~   81 (208)
                      .|.+|||+||                +|++|.+.++.+...|++|+.+.++. ..+.   ..|. .+++..+..++.+.+
T Consensus         7 ~gk~vlVTgG~T~E~iDpVR~itN~SSg~iG~aiA~~~~~~Ga~V~l~~~~~-~l~~---~~g~-~~~dv~~~~~~~~~v   81 (226)
T 1u7z_A            7 KHLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGANVTLVSGPV-SLPT---PPFV-KRVDVMTALEMEAAV   81 (226)
T ss_dssp             TTCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTTCEEEEEECSC-CCCC---CTTE-EEEECCSHHHHHHHH
T ss_pred             CCCEEEEECCCCCcccCceeeccCCCccHHHHHHHHHHHHCCCEEEEEECCc-cccc---CCCC-eEEccCcHHHHHHHH
Confidence            5889999999                68999999999999999999987553 1110   1122 345554432344444


Q ss_pred             HhHCCCCccEEEeCCC
Q 028523           82 KRYFPEGINIYFENVG   97 (208)
Q Consensus        82 ~~~~~~~~d~v~d~~g   97 (208)
                      .+..+ ++|+++.+.+
T Consensus        82 ~~~~~-~~Dili~~Aa   96 (226)
T 1u7z_A           82 NASVQ-QQNIFIGCAA   96 (226)
T ss_dssp             HHHGG-GCSEEEECCB
T ss_pred             HHhcC-CCCEEEECCc
Confidence            33332 5899999988

>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}

Probab=97.15  E-value=0.0017  Score=48.37  Aligned_cols=87  Identities=10%  Similarity=0.003  Sum_probs=59.4

Q ss_pred             CCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHHHHhHCCCCccEEEeC
Q 028523           17 KQGEYVFVSAASGAVGQLVGQFAKLVGC-YVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFEN   95 (208)
Q Consensus        17 ~~g~~vli~ga~g~vG~~a~qla~~~g~-~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~d~v~d~   95 (208)
                      -.+.+++|+|+ |++|.+++..+...|+ +|+++.|+.++.+.+.++++   .++      +. .+.+ .  .+|+||+|
T Consensus       120 ~~~k~vlvlGa-GGaaraia~~L~~~G~~~v~v~nRt~~ka~~La~~~~---~~~------~~-~l~~-l--~~DivIna  185 (282)
T 3fbt_A          120 IKNNICVVLGS-GGAARAVLQYLKDNFAKDIYVVTRNPEKTSEIYGEFK---VIS------YD-ELSN-L--KGDVIINC  185 (282)
T ss_dssp             CTTSEEEEECS-STTHHHHHHHHHHTTCSEEEEEESCHHHHHHHCTTSE---EEE------HH-HHTT-C--CCSEEEEC
T ss_pred             ccCCEEEEECC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHhcC---ccc------HH-HHHh-c--cCCEEEEC
Confidence            46889999996 8999999999989999 99999999988776653332   222      22 1222 2  58999999


Q ss_pred             CCch---h---HHHHHHhhccCCEEEEE
Q 028523           96 VGGK---M---LDAVLLNMRIQGRITLC  117 (208)
Q Consensus        96 ~g~~---~---~~~~~~~l~~~G~~v~~  117 (208)
                      ++..   .   ...-...++++..++.+
T Consensus       186 Tp~Gm~~~~~~~pi~~~~l~~~~~v~Dl  213 (282)
T 3fbt_A          186 TPKGMYPKEGESPVDKEVVAKFSSAVDL  213 (282)
T ss_dssp             SSTTSTTSTTCCSSCHHHHTTCSEEEES
T ss_pred             CccCccCCCccCCCCHHHcCCCCEEEEE
Confidence            8621   1   11234456777666554

>2d0i_A Dehydrogenase; structural genomics, NPPSFA, national project protein structural and functional analyses; 1.95A {Pyrococcus horikoshii}

Probab=97.14  E-value=0.0027  Score=48.51  Aligned_cols=87  Identities=15%  Similarity=0.195  Sum_probs=59.2

Q ss_pred             CCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHHHHhHCCCCccEEEeCC
Q 028523           17 KQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENV   96 (208)
Q Consensus        17 ~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~d~v~d~~   96 (208)
                      -.|.+|.|.|. |.+|...++.++..|.+|++.++++++ +... ++|..    +.   ++.+.+.+     .|+|+.++
T Consensus       144 l~g~~vgIIG~-G~iG~~vA~~l~~~G~~V~~~d~~~~~-~~~~-~~g~~----~~---~l~e~l~~-----aDiVil~v  208 (333)
T 2d0i_A          144 LYGKKVGILGM-GAIGKAIARRLIPFGVKLYYWSRHRKV-NVEK-ELKAR----YM---DIDELLEK-----SDIVILAL  208 (333)
T ss_dssp             STTCEEEEECC-SHHHHHHHHHHGGGTCEEEEECSSCCH-HHHH-HHTEE----EC---CHHHHHHH-----CSEEEECC
T ss_pred             CCcCEEEEEcc-CHHHHHHHHHHHHCCCEEEEECCCcch-hhhh-hcCce----ec---CHHHHHhh-----CCEEEEcC
Confidence            45789999995 999999999999999999999988766 4444 55542    11   33333332     68888777


Q ss_pred             Cch-----hH-HHHHHhhccCCEEEEEec
Q 028523           97 GGK-----ML-DAVLLNMRIQGRITLCGM  119 (208)
Q Consensus        97 g~~-----~~-~~~~~~l~~~G~~v~~g~  119 (208)
                      ...     .+ ...+..|+++ .++.++.
T Consensus       209 p~~~~t~~~i~~~~~~~mk~g-ilin~sr  236 (333)
T 2d0i_A          209 PLTRDTYHIINEERVKKLEGK-YLVNIGR  236 (333)
T ss_dssp             CCCTTTTTSBCHHHHHHTBTC-EEEECSC
T ss_pred             CCChHHHHHhCHHHHhhCCCC-EEEECCC
Confidence            632     22 2446677777 6666553

>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}

Probab=97.13  E-value=0.0013  Score=47.09  Aligned_cols=96  Identities=8%  Similarity=0.054  Sum_probs=66.2

Q ss_pred             CCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHHHHhHC-CCCccEEEe
Q 028523           16 PKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYF-PEGINIYFE   94 (208)
Q Consensus        16 ~~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~-~~~~d~v~d   94 (208)
                      ++++.+||-.|+  |.|..+..+++. |++|++++.++...+.+++......++..+-.    +.+ ... .+.||+|+.
T Consensus        46 ~~~~~~vLDiGc--G~G~~~~~l~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~~~d~~----~~~-~~~~~~~fD~v~~  117 (226)
T 3m33_A           46 LTPQTRVLEAGC--GHGPDAARFGPQ-AARWAAYDFSPELLKLARANAPHADVYEWNGK----GEL-PAGLGAPFGLIVS  117 (226)
T ss_dssp             CCTTCEEEEESC--TTSHHHHHHGGG-SSEEEEEESCHHHHHHHHHHCTTSEEEECCSC----SSC-CTTCCCCEEEEEE
T ss_pred             CCCCCeEEEeCC--CCCHHHHHHHHc-CCEEEEEECCHHHHHHHHHhCCCceEEEcchh----hcc-CCcCCCCEEEEEe
Confidence            478899999884  457777777776 88999999999998888844222222221110    000 112 337999998


Q ss_pred             CCC-chhHHHHHHhhccCCEEEEEec
Q 028523           95 NVG-GKMLDAVLLNMRIQGRITLCGM  119 (208)
Q Consensus        95 ~~g-~~~~~~~~~~l~~~G~~v~~g~  119 (208)
                      ... ...+..+.+.|+|||+++..+.
T Consensus       118 ~~~~~~~l~~~~~~LkpgG~l~~~~~  143 (226)
T 3m33_A          118 RRGPTSVILRLPELAAPDAHFLYVGP  143 (226)
T ss_dssp             ESCCSGGGGGHHHHEEEEEEEEEEES
T ss_pred             CCCHHHHHHHHHHHcCCCcEEEEeCC
Confidence            765 4678899999999999994433

>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*

Probab=97.12  E-value=0.0034  Score=46.46  Aligned_cols=91  Identities=10%  Similarity=0.019  Sum_probs=58.9

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCC--C-eeEecCCCccHHHHHHhHCCCCccEEEe
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGF--D-EAFNYKEEPDLDAALKRYFPEGINIYFE   94 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~--~-~v~~~~~~~~~~~~~~~~~~~~~d~v~d   94 (208)
                      ++.+++|+|+ |++|.+++..+...|.+|++..|+.++.+.+.++++.  . .+.+..          +...+.+|++|+
T Consensus       118 ~~~~vlvlGa-Gg~g~a~a~~L~~~G~~v~v~~R~~~~a~~l~~~~~~~~~~~~~~~~----------~~~~~~~DivIn  186 (272)
T 1p77_A          118 PNQHVLILGA-GGATKGVLLPLLQAQQNIVLANRTFSKTKELAERFQPYGNIQAVSMD----------SIPLQTYDLVIN  186 (272)
T ss_dssp             TTCEEEEECC-SHHHHTTHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGSCEEEEEGG----------GCCCSCCSEEEE
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHccccCCeEEeeHH----------HhccCCCCEEEE
Confidence            5789999996 8999999988888899999999998887766645543  1 122211          111136999999


Q ss_pred             CCCchhHHH----HHHhhccCCEEEEEec
Q 028523           95 NVGGKMLDA----VLLNMRIQGRITLCGM  119 (208)
Q Consensus        95 ~~g~~~~~~----~~~~l~~~G~~v~~g~  119 (208)
                      +++......    ....+.++..++.+..
T Consensus       187 ~t~~~~~~~~~~i~~~~l~~~~~v~D~~y  215 (272)
T 1p77_A          187 ATSAGLSGGTASVDAEILKLGSAFYDMQY  215 (272)
T ss_dssp             CCCC-------CCCHHHHHHCSCEEESCC
T ss_pred             CCCCCCCCCCCCCCHHHcCCCCEEEEeeC
Confidence            998433211    1234555666655533

>1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A*

Probab=97.12  E-value=0.0024  Score=49.70  Aligned_cols=39  Identities=15%  Similarity=0.053  Sum_probs=31.6

Q ss_pred             CCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHH
Q 028523           16 PKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKD   54 (208)
Q Consensus        16 ~~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~   54 (208)
                      .+.+.+|||+||+|-+|..+++.+...|++|+++++...
T Consensus         8 ~~~~~~vlVTG~tGfIG~~l~~~L~~~G~~V~~~~r~~~   46 (404)
T 1i24_A            8 HHHGSRVMVIGGDGYCGWATALHLSKKNYEVCIVDNLVR   46 (404)
T ss_dssp             ----CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCHH
T ss_pred             ccCCCeEEEeCCCcHHHHHHHHHHHhCCCeEEEEEecCc
Confidence            467889999999999999999888888999999987644

>2uv8_A Fatty acid synthase subunit alpha (FAS2); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_A* 3hmj_A*

Probab=97.12  E-value=0.0018  Score=59.38  Aligned_cols=80  Identities=20%  Similarity=0.242  Sum_probs=52.3

Q ss_pred             CCCEEEEecCCch-HHHHHHHHHHHcCCEEEEE-eCCHHHHHHHH----Hhc---CCCe---eEecCCCccHHHHHHhHC
Q 028523           18 QGEYVFVSAASGA-VGQLVGQFAKLVGCYVVGS-AGSKDKVDLLK----NKF---GFDE---AFNYKEEPDLDAALKRYF   85 (208)
Q Consensus        18 ~g~~vli~ga~g~-vG~~a~qla~~~g~~v~~~-~~s~~~~~~~~----~~~---g~~~---v~~~~~~~~~~~~~~~~~   85 (208)
                      .|+++||+||+++ +|.+.++.+...|++|+++ .++.++.+.+.    +++   |...   ..|..+..++...+....
T Consensus       674 ~gKvaLVTGASsGgIG~aIA~~La~~GA~Vvl~~~R~~~~l~~~~~eL~~~~~~~g~~v~~v~~DVsd~~sV~alv~~i~  753 (1887)
T 2uv8_A          674 KDKYVLITGAGKGSIGAEVLQGLLQGGAKVVVTTSRFSKQVTDYYQSIYAKYGAKGSTLIVVPFNQGSKQDVEALIEFIY  753 (1887)
T ss_dssp             TTCEEEEESCCSSSHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCCHHHHHHHHHHHHHHhhcCCCeEEEEEecCCCHHHHHHHHHHHH
Confidence            5789999999998 9999999888899999998 46655543322    133   3321   234444323333333321


Q ss_pred             -------CC-CccEEEeCCC
Q 028523           86 -------PE-GINIYFENVG   97 (208)
Q Consensus        86 -------~~-~~d~v~d~~g   97 (208)
                             -+ ++|++|++.|
T Consensus       754 ~~~~~~G~G~~LDiLVNNAG  773 (1887)
T 2uv8_A          754 DTEKNGGLGWDLDAIIPFAA  773 (1887)
T ss_dssp             SCTTTTSCCCCCSEEEECCC
T ss_pred             HhccccccCCCCeEEEECCC
Confidence                   12 5999999987

>2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris}

Probab=97.12  E-value=0.00061  Score=51.15  Aligned_cols=72  Identities=14%  Similarity=0.096  Sum_probs=47.5

Q ss_pred             CEEEEecCCchHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHhcCCCe-eEecCCCccHHHHHHhHCCCCccEEEeCC
Q 028523           20 EYVFVSAASGAVGQLVGQFAKLV--GCYVVGSAGSKDKVDLLKNKFGFDE-AFNYKEEPDLDAALKRYFPEGINIYFENV   96 (208)
Q Consensus        20 ~~vli~ga~g~vG~~a~qla~~~--g~~v~~~~~s~~~~~~~~~~~g~~~-v~~~~~~~~~~~~~~~~~~~~~d~v~d~~   96 (208)
                      .+|||+||+|.+|...++.+...  |.+|++++++..+.+...   +... ..|..+...+.+.+++.   ++|+||.+.
T Consensus         3 ~~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~---~~~~~~~D~~d~~~~~~~~~~~---~~d~vih~a   76 (312)
T 2yy7_A            3 PKILIIGACGQIGTELTQKLRKLYGTENVIASDIRKLNTDVVN---SGPFEVVNALDFNQIEHLVEVH---KITDIYLMA   76 (312)
T ss_dssp             CCEEEETTTSHHHHHHHHHHHHHHCGGGEEEEESCCCSCHHHH---SSCEEECCTTCHHHHHHHHHHT---TCCEEEECC
T ss_pred             ceEEEECCccHHHHHHHHHHHHhCCCCEEEEEcCCCccccccC---CCceEEecCCCHHHHHHHHhhc---CCCEEEECC
Confidence            57999999999999998877776  789999998766533222   2222 23443321233333221   599999998


Q ss_pred             C
Q 028523           97 G   97 (208)
Q Consensus        97 g   97 (208)
                      +
T Consensus        77 ~   77 (312)
T 2yy7_A           77 A   77 (312)
T ss_dssp             C
T ss_pred             c
Confidence            7

>3q2i_A Dehydrogenase; rossmann fold, UDP-sugar binding, NAD binding oxidoreductase; HET: NAD HP7; 1.50A {Chromobacterium violaceum} PDB: 3q2k_A*

Probab=97.10  E-value=0.055  Score=41.47  Aligned_cols=135  Identities=5%  Similarity=-0.082  Sum_probs=79.4

Q ss_pred             CEEEEecCCchHHHHHHHHHHHc--CCEEE-EEeCCHHHHHHHHHhcCCCeeEecCCCccHHHHHHhHCCCCccEEEeCC
Q 028523           20 EYVFVSAASGAVGQLVGQFAKLV--GCYVV-GSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENV   96 (208)
Q Consensus        20 ~~vli~ga~g~vG~~a~qla~~~--g~~v~-~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~d~v~d~~   96 (208)
                      -+|.|.|. |.+|...+...+..  +++++ +.++++++.+.+.+++|. .++  .   ++.+.+.+   ..+|+|+.|+
T Consensus        14 ~rvgiiG~-G~~g~~~~~~l~~~~~~~~lvav~d~~~~~~~~~~~~~~~-~~~--~---~~~~ll~~---~~~D~V~i~t   83 (354)
T 3q2i_A           14 IRFALVGC-GRIANNHFGALEKHADRAELIDVCDIDPAALKAAVERTGA-RGH--A---SLTDMLAQ---TDADIVILTT   83 (354)
T ss_dssp             EEEEEECC-STTHHHHHHHHHHTTTTEEEEEEECSSHHHHHHHHHHHCC-EEE--S---CHHHHHHH---CCCSEEEECS
T ss_pred             ceEEEEcC-cHHHHHHHHHHHhCCCCeEEEEEEcCCHHHHHHHHHHcCC-cee--C---CHHHHhcC---CCCCEEEECC
Confidence            36889995 99998877777665  67776 555677776666557886 333  1   55555543   2599999999


Q ss_pred             Cc-hhHHHHHHhhccCCEEEEEecccccCCCCCCCccchHHH----hhcceeEEEeeccccccchHHHHHHHHHHHHCCC
Q 028523           97 GG-KMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCL----ISKRIRMEGFLVPDYFHLYPKFLEMMIPRIKEGK  171 (208)
Q Consensus        97 g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~  171 (208)
                      .. ...+.+..++..|-+++ +..+..      ........+    -.++..+.-..    ..++...+..+.+++++|.
T Consensus        84 p~~~h~~~~~~al~~gk~v~-~EKP~a------~~~~~~~~l~~~a~~~g~~~~v~~----~~r~~p~~~~~k~~i~~g~  152 (354)
T 3q2i_A           84 PSGLHPTQSIECSEAGFHVM-TEKPMA------TRWEDGLEMVKAADKAKKHLFVVK----QNRRNATLQLLKRAMQEKR  152 (354)
T ss_dssp             CGGGHHHHHHHHHHTTCEEE-ECSSSC------SSHHHHHHHHHHHHHHTCCEEECC----GGGGSHHHHHHHHHHHTTT
T ss_pred             CcHHHHHHHHHHHHCCCCEE-EeCCCc------CCHHHHHHHHHHHHHhCCeEEEEE----cccCCHHHHHHHHHHhcCC
Confidence            95 56667777887765544 433210      000001111    11223222111    1223446788888999988


Q ss_pred             ceee
Q 028523          172 IVYV  175 (208)
Q Consensus       172 ~~~~  175 (208)
                      +-.+
T Consensus       153 iG~i  156 (354)
T 3q2i_A          153 FGRI  156 (354)
T ss_dssp             TCSE
T ss_pred             CCce
Confidence            7543

>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}

Probab=97.10  E-value=0.0018  Score=47.63  Aligned_cols=102  Identities=15%  Similarity=0.230  Sum_probs=68.2

Q ss_pred             HHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHh---cCCC---eeEecCCCccHHHHHHhH
Q 028523           11 FEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNK---FGFD---EAFNYKEEPDLDAALKRY   84 (208)
Q Consensus        11 ~~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~---~g~~---~v~~~~~~~~~~~~~~~~   84 (208)
                      .+...++++.+||-.|+  |.|..+..+++..+.+|++++.+++..+.+++.   .|..   .++..+-. ++     ..
T Consensus        54 ~~~~~~~~~~~vLDiGc--G~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~-~~-----~~  125 (273)
T 3bus_A           54 IALLDVRSGDRVLDVGC--GIGKPAVRLATARDVRVTGISISRPQVNQANARATAAGLANRVTFSYADAM-DL-----PF  125 (273)
T ss_dssp             HHHSCCCTTCEEEEESC--TTSHHHHHHHHHSCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTT-SC-----CS
T ss_pred             HHhcCCCCCCEEEEeCC--CCCHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECccc-cC-----CC
Confidence            34467789999999984  458888889888899999999999887777632   2332   12211111 10     11


Q ss_pred             CCCCccEEEeCC-----C--chhHHHHHHhhccCCEEEEEecc
Q 028523           85 FPEGINIYFENV-----G--GKMLDAVLLNMRIQGRITLCGMI  120 (208)
Q Consensus        85 ~~~~~d~v~d~~-----g--~~~~~~~~~~l~~~G~~v~~g~~  120 (208)
                      .++.||+|+...     .  ...+..+.+.|+|||+++.....
T Consensus       126 ~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~  168 (273)
T 3bus_A          126 EDASFDAVWALESLHHMPDRGRALREMARVLRPGGTVAIADFV  168 (273)
T ss_dssp             CTTCEEEEEEESCTTTSSCHHHHHHHHHTTEEEEEEEEEEEEE
T ss_pred             CCCCccEEEEechhhhCCCHHHHHHHHHHHcCCCeEEEEEEee
Confidence            123699997532     2  23578889999999998876543

>2ggs_A 273AA long hypothetical DTDP-4-dehydrorhamnose reductase; alpha, beta, oxidoreductase; HET: NDP; 1.70A {Sulfolobus tokodaii}

Probab=97.10  E-value=0.0017  Score=47.77  Aligned_cols=90  Identities=12%  Similarity=0.115  Sum_probs=56.5

Q ss_pred             EEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHHHHhHCCCCccEEEeCCCchh
Q 028523           21 YVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVGGKM  100 (208)
Q Consensus        21 ~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~  100 (208)
                      +|||+||+|.+|...++.+.. |.+|++++++++..   .   +  ...|..+.+.+.+.+...   ++|+||++.+...
T Consensus         2 ~ilVtGatG~iG~~l~~~L~~-g~~V~~~~r~~~~~---~---~--~~~Dl~~~~~~~~~~~~~---~~d~vi~~a~~~~   69 (273)
T 2ggs_A            2 RTLITGASGQLGIELSRLLSE-RHEVIKVYNSSEIQ---G---G--YKLDLTDFPRLEDFIIKK---RPDVIINAAAMTD   69 (273)
T ss_dssp             CEEEETTTSHHHHHHHHHHTT-TSCEEEEESSSCCT---T---C--EECCTTSHHHHHHHHHHH---CCSEEEECCCCCC
T ss_pred             EEEEECCCChhHHHHHHHHhc-CCeEEEecCCCcCC---C---C--ceeccCCHHHHHHHHHhc---CCCEEEECCcccC
Confidence            589999999999998887774 89999999876321   1   2  333444331233333322   5899999987311


Q ss_pred             ------------------HHHHHHhh-ccCCEEEEEecccc
Q 028523          101 ------------------LDAVLLNM-RIQGRITLCGMISQ  122 (208)
Q Consensus       101 ------------------~~~~~~~l-~~~G~~v~~g~~~~  122 (208)
                                        ....++.+ +.+++++.++....
T Consensus        70 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~iv~~SS~~~  110 (273)
T 2ggs_A           70 VDKCEIEKEKAYKINAEAVRHIVRAGKVIDSYIVHISTDYV  110 (273)
T ss_dssp             HHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCEEEEEEEGGG
T ss_pred             hhhhhhCHHHHHHHhHHHHHHHHHHHHHhCCeEEEEeccee
Confidence                              11223333 34679988886543

>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}

Probab=97.09  E-value=0.0022  Score=47.50  Aligned_cols=90  Identities=10%  Similarity=0.175  Sum_probs=62.6

Q ss_pred             CEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCee-EecCCCccHHHHHHhHCCCCccEEEeCCCc
Q 028523           20 EYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEA-FNYKEEPDLDAALKRYFPEGINIYFENVGG   98 (208)
Q Consensus        20 ~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~v-~~~~~~~~~~~~~~~~~~~~~d~v~d~~g~   98 (208)
                      .+|||+|+ |.+|...++.+...|.+|+++++++++.+.+. ..+...+ .|..+. +         -.++|+||.+.+.
T Consensus         6 ~~ilVtGa-G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~~D~~d~-~---------~~~~d~vi~~a~~   73 (286)
T 3ius_A            6 GTLLSFGH-GYTARVLSRALAPQGWRIIGTSRNPDQMEAIR-ASGAEPLLWPGEEP-S---------LDGVTHLLISTAP   73 (286)
T ss_dssp             CEEEEETC-CHHHHHHHHHHGGGTCEEEEEESCGGGHHHHH-HTTEEEEESSSSCC-C---------CTTCCEEEECCCC
T ss_pred             CcEEEECC-cHHHHHHHHHHHHCCCEEEEEEcChhhhhhHh-hCCCeEEEeccccc-c---------cCCCCEEEECCCc
Confidence            57999998 99999999999888999999999998887776 5554322 233221 1         2369999999873


Q ss_pred             h-----hHHHHHHhhcc----CCEEEEEeccc
Q 028523           99 K-----MLDAVLLNMRI----QGRITLCGMIS  121 (208)
Q Consensus        99 ~-----~~~~~~~~l~~----~G~~v~~g~~~  121 (208)
                      .     .....++.++.    -.+++.++...
T Consensus        74 ~~~~~~~~~~l~~a~~~~~~~~~~~v~~Ss~~  105 (286)
T 3ius_A           74 DSGGDPVLAALGDQIAARAAQFRWVGYLSTTA  105 (286)
T ss_dssp             BTTBCHHHHHHHHHHHHTGGGCSEEEEEEEGG
T ss_pred             cccccHHHHHHHHHHHhhcCCceEEEEeecce
Confidence            1     22344444433    36888887643

>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A*

Probab=97.09  E-value=0.0024  Score=47.61  Aligned_cols=101  Identities=14%  Similarity=0.148  Sum_probs=66.3

Q ss_pred             CCCCCCEEEEecCCchHHHHHHHHHHHcC-CEEEEEeCCHHHHHHHHHhcCC------CeeEecCCCccHHHHHHhHCCC
Q 028523           15 SPKQGEYVFVSAASGAVGQLVGQFAKLVG-CYVVGSAGSKDKVDLLKNKFGF------DEAFNYKEEPDLDAALKRYFPE   87 (208)
Q Consensus        15 ~~~~g~~vli~ga~g~vG~~a~qla~~~g-~~v~~~~~s~~~~~~~~~~~g~------~~v~~~~~~~~~~~~~~~~~~~   87 (208)
                      ...++.+||+.|+  |.|..+..+++..+ .+|++++.+++-.+.+++.+..      +.-+..... +..+.+... .+
T Consensus        75 ~~~~~~~VLdiG~--G~G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~-D~~~~l~~~-~~  150 (283)
T 2i7c_A           75 VSKEPKNVLVVGG--GDGGIIRELCKYKSVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIE-DASKFLENV-TN  150 (283)
T ss_dssp             TSSSCCEEEEEEC--TTSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEES-CHHHHHHHC-CS
T ss_pred             cCCCCCeEEEEeC--CcCHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHhccccCCCcEEEEEC-ChHHHHHhC-CC
Confidence            3456789999984  45777777777654 5999999999988888855532      111111122 444444332 44


Q ss_pred             CccEEEeCC----C-------chhHHHHHHhhccCCEEEEEec
Q 028523           88 GINIYFENV----G-------GKMLDAVLLNMRIQGRITLCGM  119 (208)
Q Consensus        88 ~~d~v~d~~----g-------~~~~~~~~~~l~~~G~~v~~g~  119 (208)
                      .+|+|+-..    +       .+.+..+.+.|+++|.++....
T Consensus       151 ~fD~Ii~d~~~~~~~~~~l~~~~~l~~~~~~L~pgG~lv~~~~  193 (283)
T 2i7c_A          151 TYDVIIVDSSDPIGPAETLFNQNFYEKIYNALKPNGYCVAQCE  193 (283)
T ss_dssp             CEEEEEEECCCTTTGGGGGSSHHHHHHHHHHEEEEEEEEEECC
T ss_pred             CceEEEEcCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEECC
Confidence            799998522    1       1356788899999999987643

>1gdh_A D-glycerate dehydrogenase; oxidoreductase(CHOH (D)-NAD(P)+ (A)); 2.40A {Hyphomicrobium methylovorum} SCOP: c.2.1.4 c.23.12.1

Probab=97.08  E-value=0.0035  Score=47.58  Aligned_cols=90  Identities=10%  Similarity=0.032  Sum_probs=64.7

Q ss_pred             CCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeC-CHHHHHHHHHhcCCCeeEecCCCccHHHHHHhHCCCCccEEEeC
Q 028523           17 KQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAG-SKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFEN   95 (208)
Q Consensus        17 ~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~-s~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~d~v~d~   95 (208)
                      -.|.+|.|+| .|.+|...++.++..|.+|++.++ +.++ ..+. ++|...    . . ++.+.+.+     .|+|+.+
T Consensus       144 l~g~~vgIIG-~G~IG~~~A~~l~~~G~~V~~~d~~~~~~-~~~~-~~g~~~----~-~-~l~ell~~-----aDvVil~  209 (320)
T 1gdh_A          144 LDNKTLGIYG-FGSIGQALAKRAQGFDMDIDYFDTHRASS-SDEA-SYQATF----H-D-SLDSLLSV-----SQFFSLN  209 (320)
T ss_dssp             CTTCEEEEEC-CSHHHHHHHHHHHTTTCEEEEECSSCCCH-HHHH-HHTCEE----C-S-SHHHHHHH-----CSEEEEC
T ss_pred             CCCCEEEEEC-cCHHHHHHHHHHHHCCCEEEEECCCCcCh-hhhh-hcCcEE----c-C-CHHHHHhh-----CCEEEEe
Confidence            3678999999 599999999999999999999998 6655 3444 667631    1 1 34443432     7899988


Q ss_pred             CCc-h----hH-HHHHHhhccCCEEEEEecc
Q 028523           96 VGG-K----ML-DAVLLNMRIQGRITLCGMI  120 (208)
Q Consensus        96 ~g~-~----~~-~~~~~~l~~~G~~v~~g~~  120 (208)
                      +.. +    .+ ...+..|+++..++.++..
T Consensus       210 ~p~~~~t~~~i~~~~l~~mk~gailIn~arg  240 (320)
T 1gdh_A          210 APSTPETRYFFNKATIKSLPQGAIVVNTARG  240 (320)
T ss_dssp             CCCCTTTTTCBSHHHHTTSCTTEEEEECSCG
T ss_pred             ccCchHHHhhcCHHHHhhCCCCcEEEECCCC
Confidence            772 2    12 4567788888888887763

>2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa}

Probab=97.08  E-value=0.0012  Score=49.82  Aligned_cols=73  Identities=16%  Similarity=0.188  Sum_probs=46.4

Q ss_pred             CCEEEEecCCchHHHHHHHHHHHcCCEEEEEeC-CHHH---HHHHHHhcCC--C--ee--EecCCCccHHHHHHhHCCCC
Q 028523           19 GEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAG-SKDK---VDLLKNKFGF--D--EA--FNYKEEPDLDAALKRYFPEG   88 (208)
Q Consensus        19 g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~-s~~~---~~~~~~~~g~--~--~v--~~~~~~~~~~~~~~~~~~~~   88 (208)
                      |.+|||+||+|.+|...++.+...|++|+++++ ++++   ...+. .+..  .  .+  .|..+...+.+.+.     +
T Consensus         1 ~k~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~~~~~~Dl~d~~~~~~~~~-----~   74 (322)
T 2p4h_X            1 KGRVCVTGGTGFLGSWIIKSLLENGYSVNTTIRADPERKRDVSFLT-NLPGASEKLHFFNADLSNPDSFAAAIE-----G   74 (322)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEECCCC----CCCHHHH-TSTTHHHHEEECCCCTTCGGGGHHHHT-----T
T ss_pred             CCEEEEECChhHHHHHHHHHHHHCCCEEEEEEeCCccchhHHHHHH-hhhccCCceEEEecCCCCHHHHHHHHc-----C
Confidence            468999999999999999988889999999887 5432   22222 2211  0  11  24443323333332     4


Q ss_pred             ccEEEeCCC
Q 028523           89 INIYFENVG   97 (208)
Q Consensus        89 ~d~v~d~~g   97 (208)
                      +|+||.+.+
T Consensus        75 ~d~vih~A~   83 (322)
T 2p4h_X           75 CVGIFHTAS   83 (322)
T ss_dssp             CSEEEECCC
T ss_pred             CCEEEEcCC
Confidence            899999875

>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*

Probab=97.07  E-value=0.0014  Score=47.72  Aligned_cols=98  Identities=11%  Similarity=0.157  Sum_probs=66.8

Q ss_pred             cCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH---hcCCCe---eEecCCCccHHHHHHhHCCC
Q 028523           14 CSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKN---KFGFDE---AFNYKEEPDLDAALKRYFPE   87 (208)
Q Consensus        14 ~~~~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~---~~g~~~---v~~~~~~~~~~~~~~~~~~~   87 (208)
                      ..++++++||-.|+  |.|..+..+++..+.+|++++.++...+.+++   ..|...   ++..+-. ++     ....+
T Consensus        42 ~~~~~~~~vLDiG~--G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~-~~-----~~~~~  113 (257)
T 3f4k_A           42 NELTDDAKIADIGC--GTGGQTLFLADYVKGQITGIDLFPDFIEIFNENAVKANCADRVKGITGSMD-NL-----PFQNE  113 (257)
T ss_dssp             CCCCTTCEEEEETC--TTSHHHHHHHHHCCSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTT-SC-----SSCTT
T ss_pred             hcCCCCCeEEEeCC--CCCHHHHHHHHhCCCeEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChh-hC-----CCCCC
Confidence            46788999999984  45888999999887799999999988777663   234321   2211111 11     01123


Q ss_pred             CccEEEeC-----CC-chhHHHHHHhhccCCEEEEEec
Q 028523           88 GINIYFEN-----VG-GKMLDAVLLNMRIQGRITLCGM  119 (208)
Q Consensus        88 ~~d~v~d~-----~g-~~~~~~~~~~l~~~G~~v~~g~  119 (208)
                      .||+|+..     .+ ...+..+.+.|+|||.++....
T Consensus       114 ~fD~v~~~~~l~~~~~~~~l~~~~~~L~pgG~l~~~~~  151 (257)
T 3f4k_A          114 ELDLIWSEGAIYNIGFERGMNEWSKYLKKGGFIAVSEA  151 (257)
T ss_dssp             CEEEEEEESCSCCCCHHHHHHHHHTTEEEEEEEEEEEE
T ss_pred             CEEEEEecChHhhcCHHHHHHHHHHHcCCCcEEEEEEe
Confidence            79999753     22 2467889999999999987753

>2w2k_A D-mandelate dehydrogenase; 2-hydroxyacid dehydrogenase, oxidoreductase; 1.85A {Rhodotorula graminis} PDB: 2w2l_A* 2w2l_D* 2w2k_B

Probab=97.07  E-value=0.0038  Score=47.95  Aligned_cols=92  Identities=17%  Similarity=0.167  Sum_probs=64.2

Q ss_pred             CCCCCEEEEecCCchHHHHHHHHHH-HcCCEEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHHHHhHCCCCccEEEe
Q 028523           16 PKQGEYVFVSAASGAVGQLVGQFAK-LVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFE   94 (208)
Q Consensus        16 ~~~g~~vli~ga~g~vG~~a~qla~-~~g~~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~d~v~d   94 (208)
                      --.|.+|.|+| .|.+|...++.++ ..|.+|++.+++.++.+.+. ++|...+     . ++.+.+.+     .|+|+.
T Consensus       160 ~l~g~~vgIIG-~G~IG~~vA~~l~~~~G~~V~~~d~~~~~~~~~~-~~g~~~~-----~-~l~ell~~-----aDvVil  226 (348)
T 2w2k_A          160 NPRGHVLGAVG-LGAIQKEIARKAVHGLGMKLVYYDVAPADAETEK-ALGAERV-----D-SLEELARR-----SDCVSV  226 (348)
T ss_dssp             CSTTCEEEEEC-CSHHHHHHHHHHHHTTCCEEEEECSSCCCHHHHH-HHTCEEC-----S-SHHHHHHH-----CSEEEE
T ss_pred             CCCCCEEEEEE-ECHHHHHHHHHHHHhcCCEEEEECCCCcchhhHh-hcCcEEe-----C-CHHHHhcc-----CCEEEE
Confidence            34688999999 5999999999999 99999999998876665555 5665321     1 33333332     688888


Q ss_pred             CCCc-h----hH-HHHHHhhccCCEEEEEecc
Q 028523           95 NVGG-K----ML-DAVLLNMRIQGRITLCGMI  120 (208)
Q Consensus        95 ~~g~-~----~~-~~~~~~l~~~G~~v~~g~~  120 (208)
                      ++.. +    .+ ...+..|+++..++.++..
T Consensus       227 ~vp~~~~t~~li~~~~l~~mk~gailin~srg  258 (348)
T 2w2k_A          227 SVPYMKLTHHLIDEAFFAAMKPGSRIVNTARG  258 (348)
T ss_dssp             CCCCSGGGTTCBCHHHHHHSCTTEEEEECSCG
T ss_pred             eCCCChHHHHHhhHHHHhcCCCCCEEEECCCC
Confidence            8763 2    12 3566777777777766553

>2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A

Probab=97.07  E-value=0.00066  Score=51.72  Aligned_cols=72  Identities=14%  Similarity=0.122  Sum_probs=47.0

Q ss_pred             EEEEecCCchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHhcCCCe-eEecCCCcc-HHHHHHhHCCCCccEEEeCCC
Q 028523           21 YVFVSAASGAVGQLVGQFAKLV-GCYVVGSAGSKDKVDLLKNKFGFDE-AFNYKEEPD-LDAALKRYFPEGINIYFENVG   97 (208)
Q Consensus        21 ~vli~ga~g~vG~~a~qla~~~-g~~v~~~~~s~~~~~~~~~~~g~~~-v~~~~~~~~-~~~~~~~~~~~~~d~v~d~~g   97 (208)
                      +|||+||+|.+|...++.+... |.+|++++++.++.+.+.+..+... ..|..+..+ +.+.+.     ++|+||.+.+
T Consensus         2 ~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~-----~~d~vih~A~   76 (345)
T 2bll_A            2 RVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFLNHPHFHFVEGDISIHSEWIEYHVK-----KCDVVLPLVA   76 (345)
T ss_dssp             EEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGGGGTTCTTEEEEECCTTTCSHHHHHHHH-----HCSEEEECBC
T ss_pred             eEEEECCCcHHHHHHHHHHHHhCCCEEEEEeCCcchHHHhhcCCCeEEEeccccCcHHHHHhhcc-----CCCEEEEccc
Confidence            6999999999999999888877 8999999988766443321111111 223333212 222222     4899999876

>4dmg_A Putative uncharacterized protein TTHA1493; rRNA, methyltransferase, S-adenosyl-methionine, 23S ribosoma transferase; HET: SAM; 1.70A {Thermus thermophilus}

Probab=97.06  E-value=0.0078  Score=47.01  Aligned_cols=98  Identities=14%  Similarity=0.175  Sum_probs=64.8

Q ss_pred             CCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHh---cCCCeeEecCCCccHHHHHHhHCCCCccEE
Q 028523           16 PKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNK---FGFDEAFNYKEEPDLDAALKRYFPEGINIY   92 (208)
Q Consensus        16 ~~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~---~g~~~v~~~~~~~~~~~~~~~~~~~~~d~v   92 (208)
                      .++|++||=.|  .++|..++.+++. |++|++++.|+...+.+++.   .|...-+.  .. +..+.+....+ .||+|
T Consensus       212 ~~~g~~VLDlg--~GtG~~sl~~a~~-ga~V~avDis~~al~~a~~n~~~ng~~~~~~--~~-D~~~~l~~~~~-~fD~I  284 (393)
T 4dmg_A          212 VRPGERVLDVY--SYVGGFALRAARK-GAYALAVDKDLEALGVLDQAALRLGLRVDIR--HG-EALPTLRGLEG-PFHHV  284 (393)
T ss_dssp             CCTTCEEEEES--CTTTHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHHTCCCEEE--ES-CHHHHHHTCCC-CEEEE
T ss_pred             hcCCCeEEEcc--cchhHHHHHHHHc-CCeEEEEECCHHHHHHHHHHHHHhCCCCcEE--Ec-cHHHHHHHhcC-CCCEE
Confidence            34589988666  3456666666664 78899999999988877643   24432222  22 55555544433 49999


Q ss_pred             EeCCCc----------------hhHHHHHHhhccCCEEEEEecc
Q 028523           93 FENVGG----------------KMLDAVLLNMRIQGRITLCGMI  120 (208)
Q Consensus        93 ~d~~g~----------------~~~~~~~~~l~~~G~~v~~g~~  120 (208)
                      +-..+.                ..+..+.+.|+|||.++.+...
T Consensus       285 i~dpP~f~~~~~~~~~~~~~~~~ll~~a~~~LkpGG~Lv~~s~s  328 (393)
T 4dmg_A          285 LLDPPTLVKRPEELPAMKRHLVDLVREALRLLAEEGFLWLSSCS  328 (393)
T ss_dssp             EECCCCCCSSGGGHHHHHHHHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred             EECCCcCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECC
Confidence            853332                3567788999999999877654

>1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2

Probab=97.06  E-value=0.0049  Score=46.86  Aligned_cols=73  Identities=16%  Similarity=0.248  Sum_probs=46.9

Q ss_pred             EEEEecCCchHHHHHHHHHHHcCCEEEEEeCCH--HH---HHHHHHhcCCCee--EecCCCccHHHHHHhHCCCCccEEE
Q 028523           21 YVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSK--DK---VDLLKNKFGFDEA--FNYKEEPDLDAALKRYFPEGINIYF   93 (208)
Q Consensus        21 ~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~--~~---~~~~~~~~g~~~v--~~~~~~~~~~~~~~~~~~~~~d~v~   93 (208)
                      +|||+||+|.+|...++.+...|.+|++++++.  ..   .+.+. ..+....  .|..+...+.+.+...   ++|+||
T Consensus         3 ~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~l~-~~~~~~~~~~Dl~d~~~~~~~~~~~---~~d~vi   78 (347)
T 1orr_A            3 KLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLS-SLGNFEFVHGDIRNKNDVTRLITKY---MPDSCF   78 (347)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSTTHHHHHHHHH-TTCCCEEEECCTTCHHHHHHHHHHH---CCSEEE
T ss_pred             EEEEeCCCchhHHHHHHHHHhCCCEEEEEeCCCccCchhhhhhhc-cCCceEEEEcCCCCHHHHHHHHhcc---CCCEEE
Confidence            699999999999999998888899999998642  11   22232 2231222  3443331233333321   599999


Q ss_pred             eCCC
Q 028523           94 ENVG   97 (208)
Q Consensus        94 d~~g   97 (208)
                      .+.+
T Consensus        79 h~A~   82 (347)
T 1orr_A           79 HLAG   82 (347)
T ss_dssp             ECCC
T ss_pred             ECCc
Confidence            9987

>3c3p_A Methyltransferase; NP_951602.1, structural genomics, joint for structural genomics, JCSG, protein structure initiative transferase; 1.90A {Geobacter sulfurreducens pca}

Probab=97.06  E-value=0.0011  Score=46.93  Aligned_cols=97  Identities=18%  Similarity=0.186  Sum_probs=64.1

Q ss_pred             CCCCCEEEEecCCchHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHh---cCCCeeEecCCCccHHHHHHhHCCCCcc
Q 028523           16 PKQGEYVFVSAASGAVGQLVGQFAKLV--GCYVVGSAGSKDKVDLLKNK---FGFDEAFNYKEEPDLDAALKRYFPEGIN   90 (208)
Q Consensus        16 ~~~g~~vli~ga~g~vG~~a~qla~~~--g~~v~~~~~s~~~~~~~~~~---~g~~~v~~~~~~~~~~~~~~~~~~~~~d   90 (208)
                      ..++.+||-.|  .+.|..+..+++..  +.+|++++.+++..+.+++.   .|...-+..... +..+.+.. ..+ ||
T Consensus        54 ~~~~~~vLdiG--~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~-d~~~~~~~-~~~-fD  128 (210)
T 3c3p_A           54 IKQPQLVVVPG--DGLGCASWWFARAISISSRVVMIDPDRDNVEHARRMLHDNGLIDRVELQVG-DPLGIAAG-QRD-ID  128 (210)
T ss_dssp             HHCCSEEEEES--CGGGHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHSGGGGEEEEES-CHHHHHTT-CCS-EE
T ss_pred             hhCCCEEEEEc--CCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCCCceEEEEEe-cHHHHhcc-CCC-CC
Confidence            34678899888  46788888888876  57999999999887777642   343221112122 44333322 234 99


Q ss_pred             EEEeCCC----chhHHHHHHhhccCCEEEEE
Q 028523           91 IYFENVG----GKMLDAVLLNMRIQGRITLC  117 (208)
Q Consensus        91 ~v~d~~g----~~~~~~~~~~l~~~G~~v~~  117 (208)
                      +|+-...    ...+..+.+.|++||.++.-
T Consensus       129 ~v~~~~~~~~~~~~l~~~~~~LkpgG~lv~~  159 (210)
T 3c3p_A          129 ILFMDCDVFNGADVLERMNRCLAKNALLIAV  159 (210)
T ss_dssp             EEEEETTTSCHHHHHHHHGGGEEEEEEEEEE
T ss_pred             EEEEcCChhhhHHHHHHHHHhcCCCeEEEEE
Confidence            9985432    23578888999999998764

>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}

Probab=97.05  E-value=0.0031  Score=45.44  Aligned_cols=104  Identities=13%  Similarity=0.200  Sum_probs=67.0

Q ss_pred             HHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHHHHhHCC
Q 028523            8 AGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGC-YVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFP   86 (208)
Q Consensus         8 ~~l~~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g~-~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~   86 (208)
                      ..+.......++.+||-.|+  |.|..+..+++. |. ++++++.+++..+.+++.+....+ ..... +..+ + ....
T Consensus        33 ~~l~~~~~~~~~~~vLdiG~--G~G~~~~~l~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~-~~~~~-d~~~-~-~~~~  105 (243)
T 3bkw_A           33 PALRAMLPEVGGLRIVDLGC--GFGWFCRWAHEH-GASYVLGLDLSEKMLARARAAGPDTGI-TYERA-DLDK-L-HLPQ  105 (243)
T ss_dssp             HHHHHHSCCCTTCEEEEETC--TTCHHHHHHHHT-TCSEEEEEESCHHHHHHHHHTSCSSSE-EEEEC-CGGG-C-CCCT
T ss_pred             HHHHHhccccCCCEEEEEcC--cCCHHHHHHHHC-CCCeEEEEcCCHHHHHHHHHhcccCCc-eEEEc-Chhh-c-cCCC
Confidence            34555566678899999884  347777777766 77 999999999988888844332211 11111 2111 0 1112


Q ss_pred             CCccEEEeCCC-------chhHHHHHHhhccCCEEEEEe
Q 028523           87 EGINIYFENVG-------GKMLDAVLLNMRIQGRITLCG  118 (208)
Q Consensus        87 ~~~d~v~d~~g-------~~~~~~~~~~l~~~G~~v~~g  118 (208)
                      +.+|+|+....       ...+..+.+.|+|||+++...
T Consensus       106 ~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~~  144 (243)
T 3bkw_A          106 DSFDLAYSSLALHYVEDVARLFRTVHQALSPGGHFVFST  144 (243)
T ss_dssp             TCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred             CCceEEEEeccccccchHHHHHHHHHHhcCcCcEEEEEe
Confidence            37999986533       125788889999999988754

>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*

Probab=97.05  E-value=0.0025  Score=46.88  Aligned_cols=97  Identities=13%  Similarity=0.241  Sum_probs=64.2

Q ss_pred             CCCCCEEEEecCCchHHHHHHHHHHHc---CCEEEEEeCCHHHHHHHHHh---cCCCeeEecCCCccHHHHHHhHCCCCc
Q 028523           16 PKQGEYVFVSAASGAVGQLVGQFAKLV---GCYVVGSAGSKDKVDLLKNK---FGFDEAFNYKEEPDLDAALKRYFPEGI   89 (208)
Q Consensus        16 ~~~g~~vli~ga~g~vG~~a~qla~~~---g~~v~~~~~s~~~~~~~~~~---~g~~~v~~~~~~~~~~~~~~~~~~~~~   89 (208)
                      +++|.+||=.|+  |.|..+..+++..   |++|++++.|++-.+.+++.   .+...-+..... ++    .++..+.+
T Consensus        68 ~~~~~~vLDlGc--GtG~~~~~la~~~~~~~~~v~gvD~s~~ml~~A~~~~~~~~~~~~v~~~~~-D~----~~~~~~~~  140 (261)
T 4gek_A           68 VQPGTQVYDLGC--SLGAATLSVRRNIHHDNCKIIAIDNSPAMIERCRRHIDAYKAPTPVDVIEG-DI----RDIAIENA  140 (261)
T ss_dssp             CCTTCEEEEETC--TTTHHHHHHHHTCCSSSCEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEES-CT----TTCCCCSE
T ss_pred             CCCCCEEEEEeC--CCCHHHHHHHHhcCCCCCEEEEEECCHHHHHHHHHHHHhhccCceEEEeec-cc----cccccccc
Confidence            789999999984  5677788888764   67999999999987777643   333221111111 21    11222358


Q ss_pred             cEEEeCCC-----c----hhHHHHHHhhccCCEEEEEec
Q 028523           90 NIYFENVG-----G----KMLDAVLLNMRIQGRITLCGM  119 (208)
Q Consensus        90 d~v~d~~g-----~----~~~~~~~~~l~~~G~~v~~g~  119 (208)
                      |+|+-...     .    ..+..+.+.|+|||.++....
T Consensus       141 d~v~~~~~l~~~~~~~~~~~l~~i~~~LkpGG~lii~e~  179 (261)
T 4gek_A          141 SMVVLNFTLQFLEPSERQALLDKIYQGLNPGGALVLSEK  179 (261)
T ss_dssp             EEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred             ccceeeeeeeecCchhHhHHHHHHHHHcCCCcEEEEEec
Confidence            88875432     1    247888999999999987644

>2uv9_A Fatty acid synthase alpha subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; 3.1A {Thermomyces lanuginosus} PDB: 2uvb_A*

Probab=97.04  E-value=0.0025  Score=58.44  Aligned_cols=80  Identities=18%  Similarity=0.192  Sum_probs=52.1

Q ss_pred             CCCEEEEecCCch-HHHHHHHHHHHcCCEEEEEe-CCHHHHH----HHHHhc---CCCe---eEecCCCccHHHHHHhHC
Q 028523           18 QGEYVFVSAASGA-VGQLVGQFAKLVGCYVVGSA-GSKDKVD----LLKNKF---GFDE---AFNYKEEPDLDAALKRYF   85 (208)
Q Consensus        18 ~g~~vli~ga~g~-vG~~a~qla~~~g~~v~~~~-~s~~~~~----~~~~~~---g~~~---v~~~~~~~~~~~~~~~~~   85 (208)
                      .|.++||+||+++ +|.+.++.+...|++|++++ ++.++.+    .+.+++   |...   ..|..+..++...+....
T Consensus       651 ~gKvaLVTGASgGgIG~aIAr~LA~~GA~VVl~~~R~~~~l~~~a~eL~~el~~~G~~v~~v~~DVsd~esV~alv~~i~  730 (1878)
T 2uv9_A          651 QGKHALMTGAGAGSIGAEVLQGLLSGGAKVIVTTSRFSRQVTEYYQGIYARCGARGSQLVVVPFNQGSKQDVEALVNYIY  730 (1878)
T ss_dssp             TTCEEEEESCCTTSHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCChHHHHHHHHHHHHHhhccCCeEEEEEcCCCCHHHHHHHHHHHH
Confidence            5789999999998 99999998888899999985 5444432    222244   3321   234444323444444332


Q ss_pred             -----CC-CccEEEeCCC
Q 028523           86 -----PE-GINIYFENVG   97 (208)
Q Consensus        86 -----~~-~~d~v~d~~g   97 (208)
                           -+ ++|++|++.|
T Consensus       731 ~~~~~~G~~IDiLVnNAG  748 (1878)
T 2uv9_A          731 DTKNGLGWDLDYVVPFAA  748 (1878)
T ss_dssp             CSSSSCCCCCSEEEECCC
T ss_pred             HhhcccCCCCcEEEeCcc
Confidence                 23 5999999887

>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6

Probab=97.04  E-value=0.0083  Score=44.83  Aligned_cols=85  Identities=11%  Similarity=0.031  Sum_probs=60.3

Q ss_pred             EEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHHHHhHCCCCccEEEeCCC-ch
Q 028523           21 YVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVG-GK   99 (208)
Q Consensus        21 ~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~d~v~d~~g-~~   99 (208)
                      +|.|+| .|.+|...++.+...|.+|++.++++++.+.+. +.|...   ..   ++.+.+.     .+|+||.|++ ..
T Consensus         7 ~i~iiG-~G~~G~~~a~~l~~~g~~V~~~~~~~~~~~~~~-~~g~~~---~~---~~~~~~~-----~~D~vi~~v~~~~   73 (299)
T 1vpd_A            7 KVGFIG-LGIMGKPMSKNLLKAGYSLVVSDRNPEAIADVI-AAGAET---AS---TAKAIAE-----QCDVIITMLPNSP   73 (299)
T ss_dssp             EEEEEC-CSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHH-HTTCEE---CS---SHHHHHH-----HCSEEEECCSSHH
T ss_pred             eEEEEC-chHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHH-HCCCee---cC---CHHHHHh-----CCCEEEEECCCHH
Confidence            689999 599999988888888999999999999888887 556421   11   3444343     2799999998 44


Q ss_pred             hHHHHH-------HhhccCCEEEEEe
Q 028523          100 MLDAVL-------LNMRIQGRITLCG  118 (208)
Q Consensus       100 ~~~~~~-------~~l~~~G~~v~~g  118 (208)
                      .+...+       ..++++..++.++
T Consensus        74 ~~~~~~~~~~~l~~~l~~~~~vv~~s   99 (299)
T 1vpd_A           74 HVKEVALGENGIIEGAKPGTVLIDMS   99 (299)
T ss_dssp             HHHHHHHSTTCHHHHCCTTCEEEECS
T ss_pred             HHHHHHhCcchHhhcCCCCCEEEECC
Confidence            444444       4566677666554

>1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A*

Probab=97.04  E-value=0.0007  Score=52.47  Aligned_cols=36  Identities=17%  Similarity=0.255  Sum_probs=32.0

Q ss_pred             CEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHH
Q 028523           20 EYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDK   55 (208)
Q Consensus        20 ~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~   55 (208)
                      .+|||+||+|.+|..+++.+...|.+|++++++..+
T Consensus        29 k~vlVtGatG~IG~~l~~~L~~~g~~V~~~~r~~~~   64 (381)
T 1n7h_A           29 KIALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSN   64 (381)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSS
T ss_pred             CeEEEEcCCchHHHHHHHHHHHCCCEEEEEecCCcc
Confidence            579999999999999999888889999999987653

>4f6c_A AUSA reductase domain protein; thioester reductase, oxidoreductase; 2.81A {Staphylococcus aureus}

Probab=97.04  E-value=0.002  Score=50.73  Aligned_cols=38  Identities=8%  Similarity=0.056  Sum_probs=33.0

Q ss_pred             CCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHH
Q 028523           17 KQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKD   54 (208)
Q Consensus        17 ~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~   54 (208)
                      .++.+|||+||+|.+|..+++.+...|++|+++++++.
T Consensus        67 ~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~R~~~  104 (427)
T 4f6c_A           67 RPLGNTLLTGATGFLGAYLIEALQGYSHRIYCFIRADN  104 (427)
T ss_dssp             CCCEEEEEECTTSHHHHHHHHHHTTTEEEEEEEEECSS
T ss_pred             CCCCEEEEecCCcHHHHHHHHHHHcCCCEEEEEECCCC
Confidence            34568999999999999988888777899999998876

>2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A*

Probab=97.02  E-value=0.00051  Score=52.76  Aligned_cols=73  Identities=15%  Similarity=0.200  Sum_probs=46.1

Q ss_pred             CCEEEEecCCchHHHHHHHHHHHcC-CEEEEEeCCHHHHHHHHHhcC-CCeeEecCCCccHHHHHHhHCCC----CccEE
Q 028523           19 GEYVFVSAASGAVGQLVGQFAKLVG-CYVVGSAGSKDKVDLLKNKFG-FDEAFNYKEEPDLDAALKRYFPE----GINIY   92 (208)
Q Consensus        19 g~~vli~ga~g~vG~~a~qla~~~g-~~v~~~~~s~~~~~~~~~~~g-~~~v~~~~~~~~~~~~~~~~~~~----~~d~v   92 (208)
                      +.+|||+||+|.+|...++.+...| .+|+++++++.... .. .+. .....|..+.    +.+.....+    ++|+|
T Consensus        46 ~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~-~~-~~~~~~~~~d~~~~----~~~~~~~~~~~~~~~d~V  119 (357)
T 2x6t_A           46 GRMIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTK-FV-NLVDLNIADYMDKE----DFLIQIMAGEEFGDVEAI  119 (357)
T ss_dssp             --CEEEETTTSHHHHHHHHHHHHTTCCCEEEEECCSSGGG-GG-GTTTSCCSEEEEHH----HHHHHHHTTCCCSSCCEE
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCcEEEEEecCCCcch-hh-cccCceEeeecCcH----HHHHHHHhhcccCCCCEE
Confidence            5679999999999999999888889 79999997755421 11 221 1111222222    223333222    69999


Q ss_pred             EeCCC
Q 028523           93 FENVG   97 (208)
Q Consensus        93 ~d~~g   97 (208)
                      |.+.+
T Consensus       120 ih~A~  124 (357)
T 2x6t_A          120 FHEGA  124 (357)
T ss_dssp             EECCS
T ss_pred             EECCc
Confidence            99987

>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}

Probab=97.02  E-value=0.0091  Score=44.44  Aligned_cols=86  Identities=14%  Similarity=0.101  Sum_probs=60.3

Q ss_pred             CEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHHHHhHCCCCccEEEeCCC-c
Q 028523           20 EYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVG-G   98 (208)
Q Consensus        20 ~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~d~v~d~~g-~   98 (208)
                      .+|.|+| .|.+|...++.+...|.+|++.++++++.+.+. +.|....     . +..+.+.+     .|+||.|+. .
T Consensus         2 ~~i~iIG-~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~-~~g~~~~-----~-~~~~~~~~-----aDvvi~~vp~~   68 (287)
T 3pef_A            2 QKFGFIG-LGIMGSAMAKNLVKAGCSVTIWNRSPEKAEELA-ALGAERA-----A-TPCEVVES-----CPVTFAMLADP   68 (287)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSGGGGHHHH-HTTCEEC-----S-SHHHHHHH-----CSEEEECCSSH
T ss_pred             CEEEEEe-ecHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHH-HCCCeec-----C-CHHHHHhc-----CCEEEEEcCCH
Confidence            3688999 599999999988888999999999999988887 6665211     1 44444443     688888887 3


Q ss_pred             hhHHHHH-------HhhccCCEEEEEe
Q 028523           99 KMLDAVL-------LNMRIQGRITLCG  118 (208)
Q Consensus        99 ~~~~~~~-------~~l~~~G~~v~~g  118 (208)
                      ......+       ..++++..++..+
T Consensus        69 ~~~~~v~~~~~~l~~~l~~~~~vi~~s   95 (287)
T 3pef_A           69 AAAEEVCFGKHGVLEGIGEGRGYVDMS   95 (287)
T ss_dssp             HHHHHHHHSTTCHHHHCCTTCEEEECS
T ss_pred             HHHHHHHcCcchHhhcCCCCCEEEeCC
Confidence            4444443       4556666665553

>2o2s_A Enoyl-acyl carrier reductase; enoyl reductase, triclosan, rossmann fold, oxidoreductase; HET: NAD TCL; 2.60A {Toxoplasma gondii} PDB: 2o50_A 3nj8_A*

Probab=97.01  E-value=0.0021  Score=48.53  Aligned_cols=36  Identities=19%  Similarity=0.239  Sum_probs=31.8

Q ss_pred             CCCEEEEecC--CchHHHHHHHHHHHcCCEEEEEeCCH
Q 028523           18 QGEYVFVSAA--SGAVGQLVGQFAKLVGCYVVGSAGSK   53 (208)
Q Consensus        18 ~g~~vli~ga--~g~vG~~a~qla~~~g~~v~~~~~s~   53 (208)
                      .|+++||+||  ++++|.+.++.+...|++|+++++++
T Consensus         8 ~gk~~lVTGa~~s~GIG~aia~~la~~G~~Vv~~~r~~   45 (315)
T 2o2s_A            8 RGQTAFVAGVADSHGYGWAIAKHLASAGARVALGTWPP   45 (315)
T ss_dssp             TTCEEEEECCSSSSSHHHHHHHHHHTTTCEEEEEECHH
T ss_pred             CCCEEEEeCCCCCCChHHHHHHHHHHCCCEEEEEeccc
Confidence            5789999998  89999999998888899999998653

>1n2s_A DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold, sugar-nucleotide-binding domain; HET: NAD; 2.00A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1kc1_A* 1kc3_A* 1kbz_A*

Probab=97.01  E-value=0.0037  Score=46.54  Aligned_cols=86  Identities=5%  Similarity=0.042  Sum_probs=54.5

Q ss_pred             EEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHHHHhHCCCCccEEEeCCCchh
Q 028523           21 YVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVGGKM  100 (208)
Q Consensus        21 ~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~  100 (208)
                      +|||+||+|.+|...++.+. .|.+|+++++++.       .    ...|..+...+.+.+...   ++|+||++.+...
T Consensus         2 ~ilVtGatG~iG~~l~~~L~-~g~~V~~~~r~~~-------~----~~~D~~d~~~~~~~~~~~---~~d~vih~a~~~~   66 (299)
T 1n2s_A            2 NILLFGKTGQVGWELQRSLA-PVGNLIALDVHSK-------E----FCGDFSNPKGVAETVRKL---RPDVIVNAAAHTA   66 (299)
T ss_dssp             EEEEECTTSHHHHHHHHHTT-TTSEEEEECTTCS-------S----SCCCTTCHHHHHHHHHHH---CCSEEEECCCCCC
T ss_pred             eEEEECCCCHHHHHHHHHhh-cCCeEEEeccccc-------c----ccccCCCHHHHHHHHHhc---CCCEEEECcccCC
Confidence            58999999999999988887 7999999997651       1    112333321233333321   5899999887211


Q ss_pred             ------------------HHHHHHhhcc-CCEEEEEeccc
Q 028523          101 ------------------LDAVLLNMRI-QGRITLCGMIS  121 (208)
Q Consensus       101 ------------------~~~~~~~l~~-~G~~v~~g~~~  121 (208)
                                        ....++.+.. +.+++.++...
T Consensus        67 ~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~v~~SS~~  106 (299)
T 1n2s_A           67 VDKAESEPELAQLLNATSVEAIAKAANETGAWVVHYSTDY  106 (299)
T ss_dssp             HHHHTTCHHHHHHHHTHHHHHHHHHHTTTTCEEEEEEEGG
T ss_pred             HhhhhcCHHHHHHHHHHHHHHHHHHHHHcCCcEEEEeccc
Confidence                              1234444444 45888887653

>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}

Probab=97.00  E-value=0.0042  Score=45.65  Aligned_cols=100  Identities=12%  Similarity=0.020  Sum_probs=64.9

Q ss_pred             HhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCC-eeEecCCCccHHHHHHhHCCCCcc
Q 028523           12 EVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFD-EAFNYKEEPDLDAALKRYFPEGIN   90 (208)
Q Consensus        12 ~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~-~v~~~~~~~~~~~~~~~~~~~~~d   90 (208)
                      ....+.++++||=.|+  |.|..+..+++. |++|++++.|++-.+.+++..... ...+..+. +.  .......+.||
T Consensus        39 ~~l~l~~g~~VLDlGc--GtG~~a~~La~~-g~~V~gvD~S~~ml~~Ar~~~~~~~v~~~~~~~-~~--~~~~~~~~~fD  112 (261)
T 3iv6_A           39 FLENIVPGSTVAVIGA--STRFLIEKALER-GASVTVFDFSQRMCDDLAEALADRCVTIDLLDI-TA--EIPKELAGHFD  112 (261)
T ss_dssp             HTTTCCTTCEEEEECT--TCHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHTSSSCCEEEECCT-TS--CCCGGGTTCCS
T ss_pred             HhcCCCCcCEEEEEeC--cchHHHHHHHhc-CCEEEEEECCHHHHHHHHHHHHhccceeeeeec-cc--ccccccCCCcc
Confidence            4457889999999984  568888888775 789999999999998888554332 11222211 10  00001123699


Q ss_pred             EEEeCCC-----c----hhHHHHHHhhccCCEEEEEe
Q 028523           91 IYFENVG-----G----KMLDAVLLNMRIQGRITLCG  118 (208)
Q Consensus        91 ~v~d~~g-----~----~~~~~~~~~l~~~G~~v~~g  118 (208)
                      +|+....     .    ..+..+.+.| |||+++..-
T Consensus       113 ~Vv~~~~l~~~~~~~~~~~l~~l~~lL-PGG~l~lS~  148 (261)
T 3iv6_A          113 FVLNDRLINRFTTEEARRACLGMLSLV-GSGTVRASV  148 (261)
T ss_dssp             EEEEESCGGGSCHHHHHHHHHHHHHHH-TTSEEEEEE
T ss_pred             EEEEhhhhHhCCHHHHHHHHHHHHHhC-cCcEEEEEe
Confidence            9986432     1    1466777788 999987643

>3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp}

Probab=97.00  E-value=0.0017  Score=47.21  Aligned_cols=101  Identities=8%  Similarity=0.028  Sum_probs=64.4

Q ss_pred             cCCCCCCEEEEecCCchHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHH---hcCCCeeEecCCCccHHHHHHhHC---
Q 028523           14 CSPKQGEYVFVSAASGAVGQLVGQFAKLV--GCYVVGSAGSKDKVDLLKN---KFGFDEAFNYKEEPDLDAALKRYF---   85 (208)
Q Consensus        14 ~~~~~g~~vli~ga~g~vG~~a~qla~~~--g~~v~~~~~s~~~~~~~~~---~~g~~~v~~~~~~~~~~~~~~~~~---   85 (208)
                      ....++.+||=.|+  +.|..++.+++.+  +.+|++++.+++..+.+++   ..|...-+..... +..+.+....   
T Consensus        56 ~~~~~~~~VLDiG~--G~G~~t~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~g-da~~~l~~~~~~~  132 (242)
T 3r3h_A           56 IRLTRAKKVLELGT--FTGYSALAMSLALPDDGQVITCDINEGWTKHAHPYWREAKQEHKIKLRLG-PALDTLHSLLNEG  132 (242)
T ss_dssp             HHHHTCSEEEEEES--CCSHHHHHHHHTSCTTCEEEEEECCCSSCCCSHHHHHHTTCTTTEEEEES-CHHHHHHHHHHHH
T ss_pred             HhhcCcCEEEEeeC--CcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEc-CHHHHHHHHhhcc
Confidence            34567789998884  4577788888876  5699999988875333321   4565321222222 4444433331   


Q ss_pred             -CCCccEEEeCCCc----hhHHHHHHhhccCCEEEEE
Q 028523           86 -PEGINIYFENVGG----KMLDAVLLNMRIQGRITLC  117 (208)
Q Consensus        86 -~~~~d~v~d~~g~----~~~~~~~~~l~~~G~~v~~  117 (208)
                       .+.||+||-....    ..+..+.+.|+|||.++.-
T Consensus       133 ~~~~fD~V~~d~~~~~~~~~l~~~~~~LkpGG~lv~d  169 (242)
T 3r3h_A          133 GEHQFDFIFIDADKTNYLNYYELALKLVTPKGLIAID  169 (242)
T ss_dssp             CSSCEEEEEEESCGGGHHHHHHHHHHHEEEEEEEEEE
T ss_pred             CCCCEeEEEEcCChHHhHHHHHHHHHhcCCCeEEEEE
Confidence             2479999864442    2477889999999998874

>4fb5_A Probable oxidoreductase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, GFO/IDH/MOCA family; 2.61A {Rhizobium etli}

Probab=97.00  E-value=0.062  Score=41.55  Aligned_cols=90  Identities=12%  Similarity=0.113  Sum_probs=59.2

Q ss_pred             CEEEEecCCchHHHHHHHHHHH--------cCCEEEEEeC-CHHHHHHHHHhcCCCeeEecCCCccHHHHHHhHCCCCcc
Q 028523           20 EYVFVSAASGAVGQLVGQFAKL--------VGCYVVGSAG-SKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGIN   90 (208)
Q Consensus        20 ~~vli~ga~g~vG~~a~qla~~--------~g~~v~~~~~-s~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~d   90 (208)
                      =+|.|.| +|.+|..-+...+.        -++++++++. ++++.+.+.+++|...+++     ++.+.+.+   ..+|
T Consensus        26 irvgiIG-~G~ig~~H~~a~~~~~~~~~~~~~~~lvav~d~~~~~a~~~a~~~g~~~~y~-----d~~ell~~---~~iD   96 (393)
T 4fb5_A           26 LGIGLIG-TGYMGKCHALAWNAVKTVFGDVERPRLVHLAEANAGLAEARAGEFGFEKATA-----DWRALIAD---PEVD   96 (393)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHTTHHHHHCSSCCCEEEEEECC--TTHHHHHHHHTCSEEES-----CHHHHHHC---TTCC
T ss_pred             ccEEEEc-CCHHHHHHHHHHHhhhhhhccCCCcEEEEEECCCHHHHHHHHHHhCCCeecC-----CHHHHhcC---CCCc
Confidence            3788999 59999765543332        2567877664 4556666655899876652     56555542   3699


Q ss_pred             EEEeCCCc-hhHHHHHHhhccCCEEEEEec
Q 028523           91 IYFENVGG-KMLDAVLLNMRIQGRITLCGM  119 (208)
Q Consensus        91 ~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~  119 (208)
                      +|+.|+.. ...+.+..+|..|-+ |++..
T Consensus        97 aV~IatP~~~H~~~a~~al~aGkh-Vl~EK  125 (393)
T 4fb5_A           97 VVSVTTPNQFHAEMAIAALEAGKH-VWCEK  125 (393)
T ss_dssp             EEEECSCGGGHHHHHHHHHHTTCE-EEECS
T ss_pred             EEEECCChHHHHHHHHHHHhcCCe-EEEcc
Confidence            99999995 577888888887655 44433

>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus}

Probab=97.00  E-value=0.0008  Score=48.53  Aligned_cols=98  Identities=12%  Similarity=0.145  Sum_probs=64.0

Q ss_pred             cCCCCCCEEEEecCCchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHh---cCCC---eeEecCCCccHHHHHHhHCC
Q 028523           14 CSPKQGEYVFVSAASGAVGQLVGQFAKLV-GCYVVGSAGSKDKVDLLKNK---FGFD---EAFNYKEEPDLDAALKRYFP   86 (208)
Q Consensus        14 ~~~~~g~~vli~ga~g~vG~~a~qla~~~-g~~v~~~~~s~~~~~~~~~~---~g~~---~v~~~~~~~~~~~~~~~~~~   86 (208)
                      ....++.+||=.|+  +.|..+..+++.. +.+|++++.+++..+.+++.   .|..   .++..    +..+.+.....
T Consensus        67 ~~~~~~~~vLDiG~--G~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~----d~~~~~~~~~~  140 (232)
T 3ntv_A           67 IRMNNVKNILEIGT--AIGYSSMQFASISDDIHVTTIERNETMIQYAKQNLATYHFENQVRIIEG----NALEQFENVND  140 (232)
T ss_dssp             HHHHTCCEEEEECC--SSSHHHHHHHTTCTTCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEES----CGGGCHHHHTT
T ss_pred             HhhcCCCEEEEEeC--chhHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEC----CHHHHHHhhcc
Confidence            34567889998884  5577788888754 67999999999887777642   3432   22221    22222220113


Q ss_pred             CCccEEEeCCCc----hhHHHHHHhhccCCEEEEE
Q 028523           87 EGINIYFENVGG----KMLDAVLLNMRIQGRITLC  117 (208)
Q Consensus        87 ~~~d~v~d~~g~----~~~~~~~~~l~~~G~~v~~  117 (208)
                      +.||+|+-....    ..+..+.+.|+|||.++.-
T Consensus       141 ~~fD~V~~~~~~~~~~~~l~~~~~~LkpgG~lv~d  175 (232)
T 3ntv_A          141 KVYDMIFIDAAKAQSKKFFEIYTPLLKHQGLVITD  175 (232)
T ss_dssp             SCEEEEEEETTSSSHHHHHHHHGGGEEEEEEEEEE
T ss_pred             CCccEEEEcCcHHHHHHHHHHHHHhcCCCeEEEEe
Confidence            479999864432    2567888999999998763

>2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}

Probab=97.00  E-value=0.0012  Score=59.19  Aligned_cols=80  Identities=19%  Similarity=0.223  Sum_probs=52.1

Q ss_pred             CCCEEEEecCCch-HHHHHHHHHHHcCCEEEEE-eCCHHHHHHHHHhc-------CCCe---eEecCCCccHHHHHHhHC
Q 028523           18 QGEYVFVSAASGA-VGQLVGQFAKLVGCYVVGS-AGSKDKVDLLKNKF-------GFDE---AFNYKEEPDLDAALKRYF   85 (208)
Q Consensus        18 ~g~~vli~ga~g~-vG~~a~qla~~~g~~v~~~-~~s~~~~~~~~~~~-------g~~~---v~~~~~~~~~~~~~~~~~   85 (208)
                      .|+++||+||+++ +|.+.++.+...|++|+++ .++.++.+.+.+++       |...   ..|..+..++.+.+....
T Consensus       475 ~GKvALVTGASgGGIGrAIAr~LA~~GA~VVL~~~R~~e~lee~a~eL~ael~a~Ga~V~vV~~DVTD~esVeaLVe~I~  554 (1688)
T 2pff_A          475 KDKYVLITGAGKGSIGAEVLQGLLQGGAKVVVTTSRFSKQVTDYYQSIYAKYGAKGSTLIVVPFNQGSKQDVEALIEFIY  554 (1688)
T ss_dssp             CSCCEEECSCSSSSTHHHHHHHHHHHTCEEEEEESSCSTTTTTHHHHTTTTTCCTTCEEEEEECCSSSTTHHHHHHHHHH
T ss_pred             CCCEEEEECCChHHHHHHHHHHHHHCcCEEEEEeCCCHHHHHHHHHHHHHHhhcCCCeEEEEEeCCCCHHHHHHHHHHHH
Confidence            5788999999998 9999998888889999988 45554433222133       3221   235554424444444332


Q ss_pred             C-------C-CccEEEeCCC
Q 028523           86 P-------E-GINIYFENVG   97 (208)
Q Consensus        86 ~-------~-~~d~v~d~~g   97 (208)
                      .       + ++|++|++.|
T Consensus       555 e~~~~~GfG~~IDILVNNAG  574 (1688)
T 2pff_A          555 DTEKNGGLGWDLDAIIPFAA  574 (1688)
T ss_dssp             SCTTSSSCCCCCCEEECCCC
T ss_pred             HhccccccCCCCeEEEECCC
Confidence            1       2 5999999887

>1a4i_A Methylenetetrahydrofolate dehydrogenase / methenyltetrahydrofolate cyclohydrolase...; THF, bifunctional, oxidoreductase; HET: NDP; 1.50A {Homo sapiens} SCOP: c.2.1.7 c.58.1.2 PDB: 1dia_A* 1dib_A* 1dig_A*

Probab=96.99  E-value=0.0044  Score=46.21  Aligned_cols=91  Identities=15%  Similarity=0.114  Sum_probs=63.8

Q ss_pred             hhHHHHHHHhc--C-CCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHH
Q 028523            4 MTAYAGFFEVC--S-PKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAA   80 (208)
Q Consensus         4 ~tA~~~l~~~~--~-~~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~   80 (208)
                      ||+...+.-+-  . --.|.+++|.|++..+|.-+++++...|++|++..+..                    . ++.+.
T Consensus       147 cTp~gi~~ll~~~~i~l~gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~t--------------------~-~L~~~  205 (301)
T 1a4i_A          147 CTPKGCLELIKETGVPIAGRHAVVVGRSKIVGAPMHDLLLWNNATVTTCHSKT--------------------A-HLDEE  205 (301)
T ss_dssp             HHHHHHHHHHHTTTCCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTC--------------------S-SHHHH
T ss_pred             chHHHHHHHHHHcCCCCCCCEEEEECCCchHHHHHHHHHHhCCCeEEEEECCc--------------------c-cHHHH
Confidence            56655543222  2 24789999999866799999999999999988775321                    1 44444


Q ss_pred             HHhHCCCCccEEEeCCCchhHHHHHHhhccCCEEEEEeccc
Q 028523           81 LKRYFPEGINIYFENVGGKMLDAVLLNMRIQGRITLCGMIS  121 (208)
Q Consensus        81 ~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~  121 (208)
                      ++     .+|+||.++|.+.+ --.+.+++|..++.+|...
T Consensus       206 ~~-----~ADIVI~Avg~p~~-I~~~~vk~GavVIDVgi~~  240 (301)
T 1a4i_A          206 VN-----KGDILVVATGQPEM-VKGEWIKPGAIVIDCGINY  240 (301)
T ss_dssp             HT-----TCSEEEECCCCTTC-BCGGGSCTTCEEEECCCBC
T ss_pred             hc-----cCCEEEECCCCccc-CCHHHcCCCcEEEEccCCC
Confidence            44     28999999996533 2234578999999998753

>2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A*

Probab=96.99  E-value=0.0026  Score=48.32  Aligned_cols=98  Identities=14%  Similarity=0.166  Sum_probs=64.9

Q ss_pred             CCCCEEEEecCCchHHHHHHHHHHHcC-CEEEEEeCCHHHHHHHHHhcCC------CeeEecCCCccHHHHHHhHCCCCc
Q 028523           17 KQGEYVFVSAASGAVGQLVGQFAKLVG-CYVVGSAGSKDKVDLLKNKFGF------DEAFNYKEEPDLDAALKRYFPEGI   89 (208)
Q Consensus        17 ~~g~~vli~ga~g~vG~~a~qla~~~g-~~v~~~~~s~~~~~~~~~~~g~------~~v~~~~~~~~~~~~~~~~~~~~~   89 (208)
                      ..+.+||..|+  |.|..+..+++..+ .+|++++.+++-.+.+++.+..      +.-+..... +..+.+.. ..+.|
T Consensus       115 ~~~~~VLdiG~--G~G~~~~~l~~~~~~~~v~~vDis~~~l~~ar~~~~~~~~~~~~~~v~~~~~-D~~~~l~~-~~~~f  190 (321)
T 2pt6_A          115 KEPKNVLVVGG--GDGGIIRELCKYKSVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIE-DASKFLEN-VTNTY  190 (321)
T ss_dssp             SSCCEEEEEEC--TTCHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEES-CHHHHHHH-CCSCE
T ss_pred             CCCCEEEEEcC--CccHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEEc-cHHHHHhh-cCCCc
Confidence            46689999984  45777778887754 5999999999988888854432      111111122 44444432 23479


Q ss_pred             cEEEeCC----C-------chhHHHHHHhhccCCEEEEEe
Q 028523           90 NIYFENV----G-------GKMLDAVLLNMRIQGRITLCG  118 (208)
Q Consensus        90 d~v~d~~----g-------~~~~~~~~~~l~~~G~~v~~g  118 (208)
                      |+|+-..    +       .+.+..+.+.|++||.++...
T Consensus       191 DvIi~d~~~p~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~  230 (321)
T 2pt6_A          191 DVIIVDSSDPIGPAETLFNQNFYEKIYNALKPNGYCVAQC  230 (321)
T ss_dssp             EEEEEECCCSSSGGGGGSSHHHHHHHHHHEEEEEEEEEEE
T ss_pred             eEEEECCcCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEc
Confidence            9998432    1       235778889999999998754

>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}

Probab=96.99  E-value=0.0081  Score=42.93  Aligned_cols=98  Identities=12%  Similarity=0.188  Sum_probs=63.0

Q ss_pred             cCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHh---cCCC-eeEecCCCccHHHHHHhHCCCCc
Q 028523           14 CSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNK---FGFD-EAFNYKEEPDLDAALKRYFPEGI   89 (208)
Q Consensus        14 ~~~~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~---~g~~-~v~~~~~~~~~~~~~~~~~~~~~   89 (208)
                      ..++++++||=.|+ |..|..+..+++..+.+|++++.+++..+.+++.   .|.. .++..+-. .+    ....++.|
T Consensus        51 ~~~~~~~~vLDlG~-G~~G~~~~~la~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~v~~~~~d~~-~~----~~~~~~~f  124 (230)
T 3evz_A           51 TFLRGGEVALEIGT-GHTAMMALMAEKFFNCKVTATEVDEEFFEYARRNIERNNSNVRLVKSNGG-II----KGVVEGTF  124 (230)
T ss_dssp             TTCCSSCEEEEECC-TTTCHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHTTCCCEEEECSSC-SS----TTTCCSCE
T ss_pred             hhcCCCCEEEEcCC-CHHHHHHHHHHHhcCCEEEEEECCHHHHHHHHHHHHHhCCCcEEEeCCch-hh----hhcccCce
Confidence            34678999998884 4367777777776688999999999987777632   3431 22222100 01    11122479


Q ss_pred             cEEEeCCC--------------------------chhHHHHHHhhccCCEEEEE
Q 028523           90 NIYFENVG--------------------------GKMLDAVLLNMRIQGRITLC  117 (208)
Q Consensus        90 d~v~d~~g--------------------------~~~~~~~~~~l~~~G~~v~~  117 (208)
                      |+|+-...                          ...+..+.+.|++||+++.+
T Consensus       125 D~I~~npp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~  178 (230)
T 3evz_A          125 DVIFSAPPYYDKPLGRVLTEREAIGGGKYGEEFSVKLLEEAFDHLNPGGKVALY  178 (230)
T ss_dssp             EEEEECCCCC---------------CCSSSCHHHHHHHHHHGGGEEEEEEEEEE
T ss_pred             eEEEECCCCcCCccccccChhhhhccCccchHHHHHHHHHHHHHhCCCeEEEEE
Confidence            99985421                          23467777889999998775

>3rc1_A Sugar 3-ketoreductase; sugar biosynthesis, TDP binding, NADP binding binding protein; HET: TLO NAP; 1.71A {Actinomadura kijaniata} PDB: 3rbv_A* 3rc2_A* 3rcb_A* 3rc7_A* 3rc9_A*

Probab=96.99  E-value=0.034  Score=42.59  Aligned_cols=88  Identities=11%  Similarity=0.069  Sum_probs=59.0

Q ss_pred             EEEEecCCchHHH-HHHHHHHHc-CCEEEE-EeCCHHHHHHHHHhcCCCeeEecCCCccHHHHHHhHCCCCccEEEeCCC
Q 028523           21 YVFVSAASGAVGQ-LVGQFAKLV-GCYVVG-SAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVG   97 (208)
Q Consensus        21 ~vli~ga~g~vG~-~a~qla~~~-g~~v~~-~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~d~v~d~~g   97 (208)
                      +|.|.|. |.+|. ..+..++.. ++++++ .++++++.+.+.+++|.... .     ++.+.+.   ...+|+|+.|+.
T Consensus        29 rigiIG~-G~~g~~~~~~~l~~~~~~~l~av~d~~~~~~~~~a~~~g~~~~-~-----~~~~ll~---~~~~D~V~i~tp   98 (350)
T 3rc1_A           29 RVGVIGC-ADIAWRRALPALEAEPLTEVTAIASRRWDRAKRFTERFGGEPV-E-----GYPALLE---RDDVDAVYVPLP   98 (350)
T ss_dssp             EEEEESC-CHHHHHTHHHHHHHCTTEEEEEEEESSHHHHHHHHHHHCSEEE-E-----SHHHHHT---CTTCSEEEECCC
T ss_pred             EEEEEcC-cHHHHHHHHHHHHhCCCeEEEEEEcCCHHHHHHHHHHcCCCCc-C-----CHHHHhc---CCCCCEEEECCC
Confidence            6889994 99998 566666555 778774 45666776666557887433 1     5554443   236999999999


Q ss_pred             c-hhHHHHHHhhccCCEEEEEec
Q 028523           98 G-KMLDAVLLNMRIQGRITLCGM  119 (208)
Q Consensus        98 ~-~~~~~~~~~l~~~G~~v~~g~  119 (208)
                      . ...+.+..++..|-. |++..
T Consensus        99 ~~~h~~~~~~al~aGk~-Vl~EK  120 (350)
T 3rc1_A           99 AVLHAEWIDRALRAGKH-VLAEK  120 (350)
T ss_dssp             GGGHHHHHHHHHHTTCE-EEEES
T ss_pred             cHHHHHHHHHHHHCCCc-EEEeC
Confidence            5 567777777877666 44443

>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41

Probab=96.98  E-value=0.0051  Score=44.92  Aligned_cols=102  Identities=17%  Similarity=0.215  Sum_probs=67.0

Q ss_pred             HHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHh---cCCCe--eEecCCCccHHHHHHh
Q 028523            9 GFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNK---FGFDE--AFNYKEEPDLDAALKR   83 (208)
Q Consensus         9 ~l~~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~---~g~~~--v~~~~~~~~~~~~~~~   83 (208)
                      .+......+++.+||-.|+  |.|..+..+++.. .+|++++.+++..+.+++.   .|...  .+..    +..+  ..
T Consensus        28 ~l~~~l~~~~~~~vLDiGc--G~G~~~~~l~~~~-~~v~gvD~s~~~l~~a~~~~~~~~~~~v~~~~~----d~~~--l~   98 (260)
T 1vl5_A           28 KLMQIAALKGNEEVLDVAT--GGGHVANAFAPFV-KKVVAFDLTEDILKVARAFIEGNGHQQVEYVQG----DAEQ--MP   98 (260)
T ss_dssp             HHHHHHTCCSCCEEEEETC--TTCHHHHHHGGGS-SEEEEEESCHHHHHHHHHHHHHTTCCSEEEEEC----CC-C--CC
T ss_pred             HHHHHhCCCCCCEEEEEeC--CCCHHHHHHHHhC-CEEEEEeCCHHHHHHHHHHHHhcCCCceEEEEe----cHHh--CC
Confidence            3445567789999999984  3677777777654 5999999999887777632   23321  1111    1110  01


Q ss_pred             HCCCCccEEEeCCCc-------hhHHHHHHhhccCCEEEEEec
Q 028523           84 YFPEGINIYFENVGG-------KMLDAVLLNMRIQGRITLCGM  119 (208)
Q Consensus        84 ~~~~~~d~v~d~~g~-------~~~~~~~~~l~~~G~~v~~g~  119 (208)
                      +.++.||+|+....-       ..+..+.+.|+|||.++....
T Consensus        99 ~~~~~fD~V~~~~~l~~~~d~~~~l~~~~r~LkpgG~l~~~~~  141 (260)
T 1vl5_A           99 FTDERFHIVTCRIAAHHFPNPASFVSEAYRVLKKGGQLLLVDN  141 (260)
T ss_dssp             SCTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred             CCCCCEEEEEEhhhhHhcCCHHHHHHHHHHHcCCCCEEEEEEc
Confidence            122379999876432       367889999999999988643

>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A*

Probab=96.98  E-value=0.002  Score=48.54  Aligned_cols=100  Identities=12%  Similarity=0.143  Sum_probs=65.2

Q ss_pred             CCCCCCEEEEecCCchHHHHHHHHHHHcC-CEEEEEeCCHHHHHHHHHhcC-----C-CeeEecCCCccHHHHHHhHCCC
Q 028523           15 SPKQGEYVFVSAASGAVGQLVGQFAKLVG-CYVVGSAGSKDKVDLLKNKFG-----F-DEAFNYKEEPDLDAALKRYFPE   87 (208)
Q Consensus        15 ~~~~g~~vli~ga~g~vG~~a~qla~~~g-~~v~~~~~s~~~~~~~~~~~g-----~-~~v~~~~~~~~~~~~~~~~~~~   87 (208)
                      ....+.+||+.|+  |.|..+..+++..+ .+|++++.+++-.+.+++.+.     . +.-+..... +..+.+.. ..+
T Consensus        92 ~~~~~~~VLdiG~--G~G~~~~~l~~~~~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~rv~v~~~-Da~~~l~~-~~~  167 (304)
T 2o07_A           92 SHPNPRKVLIIGG--GDGGVLREVVKHPSVESVVQCEIDEDVIQVSKKFLPGMAIGYSSSKLTLHVG-DGFEFMKQ-NQD  167 (304)
T ss_dssp             TSSSCCEEEEEEC--TTSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEES-CHHHHHHT-CSS
T ss_pred             hCCCCCEEEEECC--CchHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEEC-cHHHHHhh-CCC
Confidence            3456789999994  55777788887754 599999999998888774332     1 110111122 44444433 234


Q ss_pred             CccEEEe-CCC----------chhHHHHHHhhccCCEEEEEe
Q 028523           88 GINIYFE-NVG----------GKMLDAVLLNMRIQGRITLCG  118 (208)
Q Consensus        88 ~~d~v~d-~~g----------~~~~~~~~~~l~~~G~~v~~g  118 (208)
                      .||+||. ...          .+.+..+.+.|+++|.++.-.
T Consensus       168 ~fD~Ii~d~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~  209 (304)
T 2o07_A          168 AFDVIITDSSDPMGPAESLFKESYYQLMKTALKEDGVLCCQG  209 (304)
T ss_dssp             CEEEEEEECC-----------CHHHHHHHHHEEEEEEEEEEE
T ss_pred             CceEEEECCCCCCCcchhhhHHHHHHHHHhccCCCeEEEEec
Confidence            7999984 322          135788899999999998754

>2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae}

Probab=96.97  E-value=0.0044  Score=44.61  Aligned_cols=76  Identities=9%  Similarity=0.109  Sum_probs=51.0

Q ss_pred             CCCEEEEecC----------------CchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHHH
Q 028523           18 QGEYVFVSAA----------------SGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAAL   81 (208)
Q Consensus        18 ~g~~vli~ga----------------~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~~   81 (208)
                      .|.+|||+||                +|.+|.+.++.+...|++|+.+.++... .... ..| ..+++.....++.+.+
T Consensus         2 ~gk~vlVTgG~T~E~IDpVR~ItN~SSG~mG~aiA~~~~~~Ga~V~lv~~~~~~-~~~~-~~~-~~~~~v~s~~em~~~v   78 (232)
T 2gk4_A            2 NAMKILVTSGGTSEAIDSVRSITNHSTGHLGKIITETLLSAGYEVCLITTKRAL-KPEP-HPN-LSIREITNTKDLLIEM   78 (232)
T ss_dssp             -CCEEEEECSBCEEESSSSEEEEECCCCHHHHHHHHHHHHTTCEEEEEECTTSC-CCCC-CTT-EEEEECCSHHHHHHHH
T ss_pred             CCCEEEEeCCCcccccCceeeccCCCCCHHHHHHHHHHHHCCCEEEEEeCCccc-cccC-CCC-eEEEEHhHHHHHHHHH
Confidence            5789999999                7889999999999999999999976421 1000 011 1345544332444555


Q ss_pred             HhHCCCCccEEEeCCC
Q 028523           82 KRYFPEGINIYFENVG   97 (208)
Q Consensus        82 ~~~~~~~~d~v~d~~g   97 (208)
                      .+..+ ++|++|.+.+
T Consensus        79 ~~~~~-~~Dili~aAA   93 (232)
T 2gk4_A           79 QERVQ-DYQVLIHSMA   93 (232)
T ss_dssp             HHHGG-GCSEEEECSB
T ss_pred             HHhcC-CCCEEEEcCc
Confidence            54443 5999999887

>1udb_A Epimerase, UDP-galactose-4-epimerase; isomerase; HET: NAD UFG; 1.65A {Escherichia coli} SCOP: c.2.1.2 PDB: 1lrj_A* 1nai_A* 1uda_A* 1nah_A* 1xel_A* 1kvq_A* 1kvs_A* 1udc_A* 2udp_A* 1a9z_A* 1kvt_A* 1kvr_A* 1lrk_A* 1lrl_A* 1kvu_A* 1a9y_A*

Probab=96.97  E-value=0.0034  Score=47.68  Aligned_cols=74  Identities=16%  Similarity=0.115  Sum_probs=46.5

Q ss_pred             EEEEecCCchHHHHHHHHHHHcCCEEEEEeCCH----HHHHHHHHhcCCC-ee--EecCCCccHHHHHHhHCCCCccEEE
Q 028523           21 YVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSK----DKVDLLKNKFGFD-EA--FNYKEEPDLDAALKRYFPEGINIYF   93 (208)
Q Consensus        21 ~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~----~~~~~~~~~~g~~-~v--~~~~~~~~~~~~~~~~~~~~~d~v~   93 (208)
                      +|||+||+|.+|...++.+...|++|+++++..    +..+.+.+..+.. ..  .|..+...+.+.+..   .++|+||
T Consensus         2 ~vlVTGatG~iG~~l~~~L~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~---~~~D~vi   78 (338)
T 1udb_A            2 RVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEALMTEILHD---HAIDTVI   78 (338)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTTHHHHHHHHHTSCCEEEECCTTCHHHHHHHHHH---TTCSEEE
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEecCCCcchhHHHHHHhhcCCcceEEEccCCCHHHHHHHhhc---cCCCEEE
Confidence            589999999999999998888899999887432    2233333112321 22  244433123333332   1599999


Q ss_pred             eCCC
Q 028523           94 ENVG   97 (208)
Q Consensus        94 d~~g   97 (208)
                      ++.+
T Consensus        79 h~A~   82 (338)
T 1udb_A           79 HFAG   82 (338)
T ss_dssp             ECCS
T ss_pred             ECCc
Confidence            9987

>1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A*

Probab=96.96  E-value=0.00019  Score=54.19  Aligned_cols=97  Identities=11%  Similarity=0.039  Sum_probs=61.8

Q ss_pred             CCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHH-HHHHHhcCCC-eeE---e-cCCCccHHHHHHhHCCCCcc
Q 028523           17 KQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKV-DLLKNKFGFD-EAF---N-YKEEPDLDAALKRYFPEGIN   90 (208)
Q Consensus        17 ~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~-~~~~~~~g~~-~v~---~-~~~~~~~~~~~~~~~~~~~d   90 (208)
                      -.|.+++|.|++..+|..+++++...|++|+++.++..+. +... .++.. ...   . ++.. ++.+.+++     +|
T Consensus       175 l~gk~vvVIG~G~iVG~~~A~~L~~~gAtVtv~nR~~~~l~~ra~-~la~~~~~~t~~~~t~~~-~L~e~l~~-----AD  247 (320)
T 1edz_A          175 LYGKKCIVINRSEIVGRPLAALLANDGATVYSVDVNNIQKFTRGE-SLKLNKHHVEDLGEYSED-LLKKCSLD-----SD  247 (320)
T ss_dssp             TTTCEEEEECCCTTTHHHHHHHHHTTSCEEEEECSSEEEEEESCC-CSSCCCCEEEEEEECCHH-HHHHHHHH-----CS
T ss_pred             CCCCEEEEECCCcchHHHHHHHHHHCCCEEEEEeCchHHHHhHHH-HHhhhcccccccccccHh-HHHHHhcc-----CC
Confidence            3688999999855689999999999999999887763321 1111 33321 111   0 1112 45555554     89


Q ss_pred             EEEeCCCchhHHHHHHhhccCCEEEEEecc
Q 028523           91 IYFENVGGKMLDAVLLNMRIQGRITLCGMI  120 (208)
Q Consensus        91 ~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~  120 (208)
                      +||.++|.+.+----+.+++|-.++.+|..
T Consensus       248 IVIsAtg~p~~vI~~e~vk~GavVIDVgi~  277 (320)
T 1edz_A          248 VVITGVPSENYKFPTEYIKEGAVCINFACT  277 (320)
T ss_dssp             EEEECCCCTTCCBCTTTSCTTEEEEECSSS
T ss_pred             EEEECCCCCcceeCHHHcCCCeEEEEcCCC
Confidence            999999965321112346888788888774

>1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A*

Probab=96.96  E-value=0.0077  Score=46.76  Aligned_cols=35  Identities=17%  Similarity=0.033  Sum_probs=30.8

Q ss_pred             CEEEEecCCchHHHHHHHHHH-HcCCEEEEEeCCHH
Q 028523           20 EYVFVSAASGAVGQLVGQFAK-LVGCYVVGSAGSKD   54 (208)
Q Consensus        20 ~~vli~ga~g~vG~~a~qla~-~~g~~v~~~~~s~~   54 (208)
                      -+|||+||+|.+|..+++.+. ..|++|++++++..
T Consensus         3 m~vlVTGatG~iG~~l~~~L~~~~g~~V~~~~r~~~   38 (397)
T 1gy8_A            3 MRVLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVG   38 (397)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHCCCEEEEEECCTT
T ss_pred             CEEEEECCCCHHHHHHHHHHHHhCCCEEEEEecCCc
Confidence            479999999999999998887 88999999987654

>4had_A Probable oxidoreductase protein; structural genomics, protein structure initiative, nysgrc, PSI-biology; 2.00A {Rhizobium etli}

Probab=96.95  E-value=0.036  Score=42.33  Aligned_cols=133  Identities=13%  Similarity=0.206  Sum_probs=79.8

Q ss_pred             EEEEecCCchHHHH-HHHHHHHc-CCEEEEEe-CCHHHHHHHHHhcCCCeeEecCCCccHHHHHHhHCCCCccEEEeCCC
Q 028523           21 YVFVSAASGAVGQL-VGQFAKLV-GCYVVGSA-GSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVG   97 (208)
Q Consensus        21 ~vli~ga~g~vG~~-a~qla~~~-g~~v~~~~-~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~d~v~d~~g   97 (208)
                      ++.|.| +|.+|.. .+...+.. ++++++++ +++++.+.+.+++|...+++     ++.+.+.+   ..+|+|+.|+.
T Consensus        25 rigiIG-~G~ig~~~~~~~~~~~~~~~lvav~d~~~~~a~~~a~~~g~~~~y~-----d~~ell~~---~~iDaV~I~tP   95 (350)
T 4had_A           25 RFGIIS-TAKIGRDNVVPAIQDAENCVVTAIASRDLTRAREMADRFSVPHAFG-----SYEEMLAS---DVIDAVYIPLP   95 (350)
T ss_dssp             EEEEES-CCHHHHHTHHHHHHHCSSEEEEEEECSSHHHHHHHHHHHTCSEEES-----SHHHHHHC---SSCSEEEECSC
T ss_pred             EEEEEc-ChHHHHHHHHHHHHhCCCeEEEEEECCCHHHHHHHHHHcCCCeeeC-----CHHHHhcC---CCCCEEEEeCC
Confidence            688999 4999975 35555554 67888655 55666666655899876653     55555542   36999999999


Q ss_pred             c-hhHHHHHHhhccCCEEEEEecccccCCCCCCCccchHHHh----hcceeEEEeeccccccchHHHHHHHHHHHHCCCc
Q 028523           98 G-KMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCLI----SKRIRMEGFLVPDYFHLYPKFLEMMIPRIKEGKI  172 (208)
Q Consensus        98 ~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~  172 (208)
                      . ...+.+..+|..|-+ |++..+...+      ......+.    .+++.+.-..    ..++...+..+.+++++|.+
T Consensus        96 ~~~H~~~~~~al~aGkh-Vl~EKPla~~------~~ea~~l~~~a~~~~~~l~v~~----~~R~~p~~~~~k~~i~~G~i  164 (350)
T 4had_A           96 TSQHIEWSIKAADAGKH-VVCEKPLALK------AGDIDAVIAARDRNKVVVTEAY----MITYSPVWQKVRSLIDEGAI  164 (350)
T ss_dssp             GGGHHHHHHHHHHTTCE-EEECSCCCSS------GGGGHHHHHHHHHHTCCEEECC----GGGGSHHHHHHHHHHHTTTT
T ss_pred             CchhHHHHHHHHhcCCE-EEEeCCcccc------hhhHHHHHHHHHHcCCceeEee----eeecCHHHHHhhHhhhcCCC
Confidence            5 567788888877655 5554432110      01111221    1223222111    12334557788888999876


Q ss_pred             e
Q 028523          173 V  173 (208)
Q Consensus       173 ~  173 (208)
                      -
T Consensus       165 G  165 (350)
T 4had_A          165 G  165 (350)
T ss_dssp             S
T ss_pred             C
Confidence            4

>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36

Probab=96.95  E-value=0.012  Score=41.34  Aligned_cols=95  Identities=15%  Similarity=0.114  Sum_probs=62.3

Q ss_pred             cCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCC---------------C--eeE--ecCCC
Q 028523           14 CSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGF---------------D--EAF--NYKEE   74 (208)
Q Consensus        14 ~~~~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~---------------~--~v~--~~~~~   74 (208)
                      ..+.++.+||-.|.  |.|..+..+++. |++|++++.|++-.+.+++..+.               .  ..+  |..+.
T Consensus        18 l~~~~~~~vLD~GC--G~G~~~~~la~~-g~~V~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~l   94 (203)
T 1pjz_A           18 LNVVPGARVLVPLC--GKSQDMSWLSGQ-GYHVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCGDFFAL   94 (203)
T ss_dssp             HCCCTTCEEEETTT--CCSHHHHHHHHH-CCEEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEECCSSS
T ss_pred             cccCCCCEEEEeCC--CCcHhHHHHHHC-CCeEEEEeCCHHHHHHHHHHccCCcccccccccccccCCccEEEECccccC
Confidence            45778999999984  457777778875 89999999999988888755332               1  111  22211


Q ss_pred             ccHHHHHHhHCCCCccEEEeCCC-----c----hhHHHHHHhhccCCEEEEEe
Q 028523           75 PDLDAALKRYFPEGINIYFENVG-----G----KMLDAVLLNMRIQGRITLCG  118 (208)
Q Consensus        75 ~~~~~~~~~~~~~~~d~v~d~~g-----~----~~~~~~~~~l~~~G~~v~~g  118 (208)
                       ...+      .+.||+|++...     .    ..+..+.+.|+|||+++.+.
T Consensus        95 -~~~~------~~~fD~v~~~~~l~~l~~~~~~~~l~~~~r~LkpgG~~~l~~  140 (203)
T 1pjz_A           95 -TARD------IGHCAAFYDRAAMIALPADMRERYVQHLEALMPQACSGLLIT  140 (203)
T ss_dssp             -THHH------HHSEEEEEEESCGGGSCHHHHHHHHHHHHHHSCSEEEEEEEE
T ss_pred             -Cccc------CCCEEEEEECcchhhCCHHHHHHHHHHHHHHcCCCcEEEEEE
Confidence             1111      025999997322     1    14677889999999944443

>3l07_A Bifunctional protein fold; structural genomics, IDP01849, methylenetetrahydrofolate dehydrogenase; 1.88A {Francisella tularensis}

Probab=96.95  E-value=0.005  Score=45.59  Aligned_cols=91  Identities=20%  Similarity=0.143  Sum_probs=62.3

Q ss_pred             hhHHHHH---HHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHH
Q 028523            4 MTAYAGF---FEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAA   80 (208)
Q Consensus         4 ~tA~~~l---~~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~   80 (208)
                      ||++.++   .+..---.|.+++|.|+++.+|..+++++...|++|++..+..                    . ++.+.
T Consensus       143 cTp~gv~~lL~~~~i~l~Gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~t--------------------~-~L~~~  201 (285)
T 3l07_A          143 CTPKGIMTMLREYGIKTEGAYAVVVGASNVVGKPVSQLLLNAKATVTTCHRFT--------------------T-DLKSH  201 (285)
T ss_dssp             HHHHHHHHHHHHTTCCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTC--------------------S-SHHHH
T ss_pred             CCHHHHHHHHHHhCCCCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCc--------------------h-hHHHh
Confidence            4554443   2222234899999999867799999999999999987765321                    1 34443


Q ss_pred             HHhHCCCCccEEEeCCCchhHHHHHHhhccCCEEEEEeccc
Q 028523           81 LKRYFPEGINIYFENVGGKMLDAVLLNMRIQGRITLCGMIS  121 (208)
Q Consensus        81 ~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~  121 (208)
                      ++     ..|++|.++|.+.+ --.+.+++|-.++.+|...
T Consensus       202 ~~-----~ADIVI~Avg~p~~-I~~~~vk~GavVIDvgi~~  236 (285)
T 3l07_A          202 TT-----KADILIVAVGKPNF-ITADMVKEGAVVIDVGINH  236 (285)
T ss_dssp             HT-----TCSEEEECCCCTTC-BCGGGSCTTCEEEECCCEE
T ss_pred             cc-----cCCEEEECCCCCCC-CCHHHcCCCcEEEEecccC
Confidence            33     37999999986433 2235678888888888653

>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*

Probab=96.94  E-value=0.0022  Score=46.23  Aligned_cols=99  Identities=6%  Similarity=-0.078  Sum_probs=63.4

Q ss_pred             CCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCC--CeeEecCCCccHHHHHHhHCCCCccEEE
Q 028523           16 PKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGF--DEAFNYKEEPDLDAALKRYFPEGINIYF   93 (208)
Q Consensus        16 ~~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~--~~v~~~~~~~~~~~~~~~~~~~~~d~v~   93 (208)
                      .+++.+||=.|.  |.|..+..+++....+|++++.+++-.+.+++....  ..+ ..... ++.+....+.++.||+|+
T Consensus        58 ~~~~~~vLDiGc--GtG~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~v-~~~~~-d~~~~~~~~~~~~fD~V~  133 (236)
T 1zx0_A           58 SSKGGRVLEVGF--GMAIAASKVQEAPIDEHWIIECNDGVFQRLRDWAPRQTHKV-IPLKG-LWEDVAPTLPDGHFDGIL  133 (236)
T ss_dssp             TTTCEEEEEECC--TTSHHHHHHHTSCEEEEEEEECCHHHHHHHHHHGGGCSSEE-EEEES-CHHHHGGGSCTTCEEEEE
T ss_pred             CCCCCeEEEEec--cCCHHHHHHHhcCCCeEEEEcCCHHHHHHHHHHHHhcCCCe-EEEec-CHHHhhcccCCCceEEEE
Confidence            467889998884  456777777554334999999999988888743311  122 11122 444433233344799998


Q ss_pred             e-CCC----ch-------hHHHHHHhhccCCEEEEEe
Q 028523           94 E-NVG----GK-------MLDAVLLNMRIQGRITLCG  118 (208)
Q Consensus        94 d-~~g----~~-------~~~~~~~~l~~~G~~v~~g  118 (208)
                      . +..    ..       .+..+.+.|+|||+++.+.
T Consensus       134 ~d~~~~~~~~~~~~~~~~~l~~~~r~LkpgG~l~~~~  170 (236)
T 1zx0_A          134 YDTYPLSEETWHTHQFNFIKNHAFRLLKPGGVLTYCN  170 (236)
T ss_dssp             ECCCCCBGGGTTTHHHHHHHHTHHHHEEEEEEEEECC
T ss_pred             ECCcccchhhhhhhhHHHHHHHHHHhcCCCeEEEEEe
Confidence            7 222    11       2678899999999998754

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	208
d1vj1a2	187	c.2.1.1 (A:125-311) Putative zinc-binding alcohol	1e-31
d1v3va2	182	c.2.1.1 (A:113-294) Leukotriene b4 12-hydroxydehyd	1e-27
d1gu7a2	189	c.2.1.1 (A:161-349) 2,4-dienoyl-CoA reductase {Yea	4e-20
d1qora2	179	c.2.1.1 (A:113-291) Quinone oxidoreductase {Escher	1e-17
d1pqwa_	183	c.2.1.1 (A:) Putative enoyl reductase domain of po	4e-17
d1tt7a2	167	c.2.1.1 (A:128-294) Hypothetical protein YhfP {Bac	3e-16
d2fzwa2	176	c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (	1e-15
d2jhfa2	176	c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (	3e-15
d1f8fa2	174	c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {	4e-14
d1o89a2	177	c.2.1.1 (A:116-292) Hypothetical protein YhdH {Esc	4e-14
d1vj0a2	182	c.2.1.1 (A:156-337) Hypothetical protein TM0436 {T	5e-14
d1cdoa2	175	c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Ga	4e-13
d1h2ba2	172	c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeo	2e-11
d1yb5a2	174	c.2.1.1 (A:121-294) Quinone oxidoreductase {Human	3e-11
d1xa0a2	176	c.2.1.1 (A:119-294) B. subtilis YhfP homologue {Ba	4e-11
d1p0fa2	174	c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog	2e-09
d1o8ca2	77	c.2.1.1 (A:116-192) Hypothetical protein YhdH {Esc	8e-09
d1jqba2	174	c.2.1.1 (A:1140-1313) Bacterial secondary alcohol	1e-08
d1iz0a2	171	c.2.1.1 (A:99-269) Quinone oxidoreductase {Thermus	1e-07
d1kola2	195	c.2.1.1 (A:161-355) Formaldehyde dehydrogenase {Ps	1e-07
d1vj1a1	166	b.35.1.2 (A:-1-124,A:312-351) Putative zinc-bindin	4e-04

>d1vj1a2 c.2.1.1 (A:125-311) Putative zinc-binding alcohol dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]} Length = 187

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative zinc-binding alcohol dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score =  111 bits (278), Expect = 1e-31
 Identities = 53/177 (29%), Positives = 77/177 (43%), Gaps = 6/177 (3%)

Query: 1   MPGMTAYAGFFEVCSPKQG--EYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDL 58
           MPG+T+  G  E      G  + + VS A+GA G L GQ   L+GC  V       +  L
Sbjct: 11  MPGLTSLIGVQEKGHISAGSNQTMVVSGAAGACGSLAGQIGHLLGCSRVVGICGTQEKCL 70

Query: 59  LKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVGGKMLDAVLLNMRIQGRITLCG 118
                   +A    +  ++   L+   P G+++YF+NVGG + + V+  M     I LCG
Sbjct: 71  FLTSELGFDAAVNYKTGNVAEQLREACPGGVDVYFDNVGGDISNTVISQMNENSHIILCG 130

Query: 119 MISQYNND----KPEGVHNLTCLISKRIRMEGFLVPDYFHLYPKFLEMMIPRIKEGK 171
            ISQYN D     P           + I  E F V +Y   +   +  +    KEGK
Sbjct: 131 QISQYNKDVPYPPPLPPAVEAIRKERNITRERFTVLNYKDKFEPGILQLSQWFKEGK 187

>d1v3va2 c.2.1.1 (A:113-294) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]} Length = 182

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase
species: Guinea pig (Cavia porcellus) [TaxId: 10141]

 Score =  101 bits (251), Expect = 1e-27
 Identities = 78/172 (45%), Positives = 106/172 (61%), Gaps = 3/172 (1%)

Query: 1   MPGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLK 60
           MPG+TAY G  EVC  K GE V VSAA+GAVG +VGQ AKL GC VVG+AGS +K+  LK
Sbjct: 12  MPGLTAYFGLLEVCGVKGGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAYLK 71

Query: 61  NKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVGGKMLDAVLLNMRIQGRITLCGMI 120
                   FNYK    L+ ALK+  P+G + YF+NVGG+ L+ VL  M+  G+I +CG I
Sbjct: 72  QIGFDAA-FNYKTVNSLEEALKKASPDGYDCYFDNVGGEFLNTVLSQMKDFGKIAICGAI 130

Query: 121 SQYNND-KPEGVHNLTCLISKRIRMEGFLVPDYF-HLYPKFLEMMIPRIKEG 170
           S YN   +     +   +I K++R+EGF+V  +   +  K L  ++  + EG
Sbjct: 131 SVYNRMDQLPPGPSPESIIYKQLRIEGFIVYRWQGDVREKALRDLMKWVLEG 182

>d1gu7a2 c.2.1.1 (A:161-349) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]} Length = 189

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: 2,4-dienoyl-CoA reductase
species: Yeast (Candida tropicalis) [TaxId: 5482]

 Score = 82.0 bits (201), Expect = 4e-20
 Identities = 31/184 (16%), Positives = 56/184 (30%), Gaps = 18/184 (9%)

Query: 1   MPGMTAYAGFFEVCSPKQGEYVFV-SAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLL 59
           +  +TAY           G+  F+ +  + AVG+   Q  KL+    +     +  +D +
Sbjct: 11  VNPLTAYLMLTHYVKLTPGKDWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDRPNLDEV 70

Query: 60  ---KNKFGFDEAFNYKEE-----PDLDAALKRYFPEGINIYFENVGGKMLDAVLLNMRIQ 111
                + G  +     +              +       +    VGGK    +   +   
Sbjct: 71  VASLKELGATQVITEDQNNSREFGPTIKEWIKQSGGEAKLALNCVGGKSSTGIARKLNNN 130

Query: 112 GRITLCGMISQYNNDKPEGVHNLTCLISKRIRMEGFLVPDYFHLYPKF----LEMMIPRI 167
           G +   G +S      P         I K     GF V +      +     L  +I   
Sbjct: 131 GLMLTYGGMSFQPVTIPTS-----LYIFKNFTSAGFWVTELLKNNKELKTSTLNQIIAWY 185

Query: 168 KEGK 171
           +EGK
Sbjct: 186 EEGK 189

>d1qora2 c.2.1.1 (A:113-291) Quinone oxidoreductase {Escherichia coli [TaxId: 562]} Length = 179

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Escherichia coli [TaxId: 562]

 Score = 75.1 bits (183), Expect = 1e-17
 Identities = 36/171 (21%), Positives = 70/171 (40%), Gaps = 4/171 (2%)

Query: 1   MPGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLK 60
           + G+T Y    +    K  E     AA+G VG +  Q+AK +G  ++G+ G+  K     
Sbjct: 11  LKGLTVYYLLRKTYEIKPDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQSAL 70

Query: 61  NKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVGGKMLDAVLLNMRIQGRITLCGMI 120
            K G  +  NY+EE  ++   +    + + + +++VG    +  L  ++ +G +   G  
Sbjct: 71  -KAGAWQVINYREEDLVERLKEITGGKKVRVVYDSVGRDTWERSLDCLQRRGLMVSFGNS 129

Query: 121 SQYNNDKPEGVHNL-TCLISKRIRMEGFLVPDYFHLYPKFLEMMIPRIKEG 170
           S        G+ N    L   R  ++G++         +    +   I  G
Sbjct: 130 SGAVTGVNLGILNQKGSLYVTRPSLQGYITTR--EELTEASNELFSLIASG 178

>d1pqwa_ c.2.1.1 (A:) Putative enoyl reductase domain of polyketide synthase {Mycobacterium tuberculosis [TaxId: 1773]} Length = 183

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative enoyl reductase domain of polyketide synthase
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score = 73.5 bits (179), Expect = 4e-17
 Identities = 30/172 (17%), Positives = 66/172 (38%), Gaps = 2/172 (1%)

Query: 1   MPGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLK 60
           +  +TA+    EV     GE V + +A+G VG      AK +    + +    D    + 
Sbjct: 8   VAYLTAWHSLCEVGRLSPGERVLIHSATGGVGMAAVSIAK-MIGARIYTTAGSDAKREML 66

Query: 61  NKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVGGKMLDAVLLNMRIQGRITLCGMI 120
           ++ G +   + +     D  L+     G+++   ++ G+ +   +  +   GR    G  
Sbjct: 67  SRLGVEYVGDSRSVDFADEILELTDGYGVDVVLNSLAGEAIQRGVQILAPGGRFIELGKK 126

Query: 121 SQYNNDKPEGVHNLTCLISKRIRMEGFLVPDYFHLYPKFLEMMIPRIKEGKI 172
             Y +    G+  L    S  +      +      Y + L+ ++  + +GK+
Sbjct: 127 DVYADASL-GLAALAKSASFSVVDLDLNLKLQPARYRQLLQHILQHVADGKL 177

>d1tt7a2 c.2.1.1 (A:128-294) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]} Length = 167

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhfP
species: Bacillus subtilis [TaxId: 1423]

 Score = 70.8 bits (172), Expect = 3e-16
 Identities = 30/150 (20%), Positives = 55/150 (36%), Gaps = 11/150 (7%)

Query: 1   MPGMTAYAGF---FEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVD 57
             G TA        +     +   V V+ A+G VG +        G  VV S G+++  D
Sbjct: 3   TAGFTAALSVHRLEQNGLSPEKGSVLVTGATGGVGGIAVSMLNKRGYDVVASTGNREAAD 62

Query: 58  LLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVGGKMLDAVLLNMRIQGRITLC 117
            L  + G  E  + ++  D     K    +      + VGGK L ++L  ++  G + + 
Sbjct: 63  YL-KQLGASEVISREDVYDGTL--KALSKQQWQGAVDPVGGKQLASLLSKIQYGGSVAVS 119

Query: 118 GMISQYNNDKPEGVHNLTCLISKRIRMEGF 147
           G+              +   I + + + G 
Sbjct: 120 GLTGGGEVPAT-----VYPFILRGVSLLGI 144

>d2fzwa2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]} Length = 176

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

 Score = 69.2 bits (168), Expect = 1e-15
 Identities = 25/172 (14%), Positives = 48/172 (27%), Gaps = 11/172 (6%)

Query: 3   GMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNK 62
             T Y         + G    V    G    ++          ++G   +KDK    K +
Sbjct: 13  ISTGYGAAVNTAKLEPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAK-E 71

Query: 63  FGFDEAFNYKEEP-DLDAALKRYFPEGINIYFENVGGKMLDAVLLNMRIQGRITLCGMIS 121
           FG  E  N ++    +   L      G++  FE +G   +    L    +G      +  
Sbjct: 72  FGATECINPQDFSKPIQEVLIEMTDGGVDYSFECIGNVKVMRAALEACHKGWGVSVVVGV 131

Query: 122 QYNNDKPEGVHNLTCLISKRIRMEGFLVPDY--FHLYPKFLEMMIPRIKEGK 171
             + ++          +      +G     +      PK +          K
Sbjct: 132 AASGEEI---ATRPFQLVTGRTWKGTAFGGWKSVESVPKLVSEY----MSKK 176

>d2jhfa2 c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]} Length = 176

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Horse (Equus caballus) [TaxId: 9796]

 Score = 68.5 bits (166), Expect = 3e-15
 Identities = 21/169 (12%), Positives = 45/169 (26%), Gaps = 5/169 (2%)

Query: 3   GMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNK 62
             T Y    +V    QG    V    G    ++          ++G   +KDK    K  
Sbjct: 13  FSTGYGSAVKVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEV 72

Query: 63  FGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVGGKMLDAVLLNMRIQGRITLCGMISQ 122
              +       +  +   L      G++  FE +G        L+   +       +   
Sbjct: 73  GATECVNPQDYKKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQEAYGVSVIV--- 129

Query: 123 YNNDKPEGVHNLTCLISKRIRMEGFLVPDYFHLYPKFLEMMIPRIKEGK 171
                 + +     L+      +G +   +       +  ++      K
Sbjct: 130 GVPPDSQNLSMNPMLLLSGRTWKGAIFGGF--KSKDSVPKLVADFMAKK 176

>d1f8fa2 c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]} Length = 174

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Benzyl alcohol dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

 Score = 65.3 bits (158), Expect = 4e-14
 Identities = 32/172 (18%), Positives = 58/172 (33%), Gaps = 9/172 (5%)

Query: 1   MPGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLK 60
               T                     A GAVG      AK+ G  ++ +    +    L 
Sbjct: 11  CGIQTGAGACINALKVTPASSFVTWGA-GAVGLSALLAAKVCGASIIIAVDIVESRLELA 69

Query: 61  NKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVGGK-MLDAVLLNMRIQGRITLCGM 119
            + G     N K + D  AA+K     G+N   E+ G   +L   +  + I G+I + G 
Sbjct: 70  KQLGATHVINSKTQ-DPVAAIKEITDGGVNFALESTGSPEILKQGVDALGILGKIAVVGA 128

Query: 120 ISQYNNDKPEGVHNLTCLISKRIRMEGFLVPDYFHLYPKFLEMMIPRIKEGK 171
                  +     ++  L+     + G +         KF+  ++   ++GK
Sbjct: 129 PQLGTTAQ----FDVNDLLLGGKTILGVVEGSG--SPKKFIPELVRLYQQGK 174

>d1o89a2 c.2.1.1 (A:116-292) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]} Length = 177

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

 Score = 65.3 bits (158), Expect = 4e-14
 Identities = 32/150 (21%), Positives = 51/150 (34%), Gaps = 13/150 (8%)

Query: 1   MPGMTAYAGFF---EVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVD 57
             G TA        +     Q   + V+ ASG VG         +G  VV  +G +   +
Sbjct: 11  TAGFTAMLCVMALEDAGVRPQDGEIVVTGASGGVGSTAVALLHKLGYQVVAVSGRESTHE 70

Query: 58  LLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVGGKMLDAVLLNMRIQGRITLC 117
            LK   G        E  +     K    +      + VG K+L  VL  M   G +  C
Sbjct: 71  YLK-SLGASRVLPRDEFAESRPLEK----QVWAGAIDTVGDKVLAKVLAQMNYGGCVAAC 125

Query: 118 GMISQYNNDKPEGVHNLTCLISKRIRMEGF 147
           G+   +          +   I + +R++G 
Sbjct: 126 GLAGGFTLP-----TTVMPFILRNVRLQGV 150

>d1vj0a2 c.2.1.1 (A:156-337) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]} Length = 182

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein TM0436
species: Thermotoga maritima [TaxId: 2336]

 Score = 65.3 bits (158), Expect = 5e-14
 Identities = 36/165 (21%), Positives = 55/165 (33%), Gaps = 9/165 (5%)

Query: 3   GMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNK 62
           G TAY  F E      G+ V +  A G +G      A+ +G   V           L  +
Sbjct: 13  GATAYHAFDEYPESFAGKTVVIQGA-GPLGLFGVVIARSLGAENVIVIAGSPNRLKLAEE 71

Query: 63  FGFDEAFNYKE---EPDLDAALKRYFPEGINIYFENVGG-KMLDAVLLNMRIQGRITLCG 118
            G D   N +E   E    A +      G +   E  G  + L      +R  G  ++ G
Sbjct: 72  IGADLTLNRRETSVEERRKAIMDITHGRGADFILEATGDSRALLEGSELLRRGGFYSVAG 131

Query: 119 MISQYNNDKPEGVHNLTCLISKRIRMEGFLVPDYFHLYPKFLEMM 163
           +        P        L+ K    +G  V D  H + K + + 
Sbjct: 132 VAV---PQDPVPFKVYEWLVLKNATFKGIWVSDTSH-FVKTVSIT 172

>d1cdoa2 c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]} Length = 175

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Cod (Gadus callarias) [TaxId: 8053]

 Score = 62.7 bits (151), Expect = 4e-13
 Identities = 21/172 (12%), Positives = 45/172 (26%), Gaps = 8/172 (4%)

Query: 1   MPGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLK 60
               T +         + G    V          V          ++    + DK +  K
Sbjct: 11  CGVSTGFGAAVNTAKVEPGSTCAVFGLGAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAK 70

Query: 61  NKFGFDEAFNYKEEPDL-DAALKRYFPEGINIYFENVGGKMLDAVLLNMRIQGRITLCGM 119
             FG  +  N  +  +     L +    G++   E VG   +    L   ++G      +
Sbjct: 71  -VFGATDFVNPNDHSEPISQVLSKMTNGGVDFSLECVGNVGVMRNALESCLKGWGVSVLV 129

Query: 120 ISQYNNDKPEGVHNLTCLISKRIRMEGFLVPDYFHLYPKFLEMMIPRIKEGK 171
                +D           +      +G +   +       +  M+    + K
Sbjct: 130 GWTDLHDVA----TRPIQLIAGRTWKGSMFGGF--KGKDGVPKMVKAYLDKK 175

>d1h2ba2 c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]} Length = 172

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Aeropyrum pernix [TaxId: 56636]

 Score = 58.0 bits (139), Expect = 2e-11
 Identities = 31/171 (18%), Positives = 61/171 (35%), Gaps = 14/171 (8%)

Query: 2   PGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKN 61
            G+TAY    +                G +G +  Q  K++    V +   K++   L  
Sbjct: 15  AGITAYRAVKKAARTLYPGAYVAIVGVGGLGHIAVQLLKVMTPATVIALDVKEEKLKLAE 74

Query: 62  KFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVGGKMLDAVLLNM-RIQGRITLCGMI 120
           + G D   + + +P +   ++     G+N+  + VG +        +    GR+ + G  
Sbjct: 75  RLGADHVVDARRDP-VKQVMELTRGRGVNVAMDFVGSQATVDYTPYLLGRMGRLIIVGYG 133

Query: 121 SQYNNDKPEGVHNLTCLISKRIRMEGFLVPDYFHLYPKFLEMMIPRIKEGK 171
            +              +IS  +  EG LV +Y       L  ++    +GK
Sbjct: 134 GELR-------FPTIRVISSEVSFEGSLVGNYVE-----LHELVTLALQGK 172

>d1yb5a2 c.2.1.1 (A:121-294) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]} Length = 174

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 57.7 bits (138), Expect = 3e-11
 Identities = 41/170 (24%), Positives = 68/170 (40%), Gaps = 11/170 (6%)

Query: 1   MPGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLK 60
           +P  TAY         K GE V V  ASG VG    Q A+  G  ++G+AG+++   +  
Sbjct: 11  IPYFTAYRALIHSACVKAGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQKI-V 69

Query: 61  NKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVGGKMLDAVLLNMRIQGRITLCGMI 120
            + G  E FN++E   +D   K    +GI+I  E +    L   L  +   GR+ + G  
Sbjct: 70  LQNGAHEVFNHREVNYIDKIKKYVGEKGIDIIIEMLANVNLSKDLSLLSHGGRVIVVGSR 129

Query: 121 SQYNNDKPEGVHNLTCLISKRIRMEGFLVPDYFHLYPKFLEMMIPRIKEG 170
                       N    ++K   + G  +   F    +  +     ++ G
Sbjct: 130 GTIEI-------NPRDTMAKESSIIGVTL---FSSTKEEFQQYAAALQAG 169

>d1xa0a2 c.2.1.1 (A:119-294) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]} Length = 176

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: B. subtilis YhfP homologue
species: Bacillus stearothermophilus [TaxId: 1422]

 Score = 57.6 bits (138), Expect = 4e-11
 Identities = 30/149 (20%), Positives = 48/149 (32%), Gaps = 11/149 (7%)

Query: 1   MPGMTAYAGFF---EVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVD 57
             G TA        E     +   V V+ A+G VG L        G  V  S G   + D
Sbjct: 11  TAGFTAALSIHRLEEHGLTPERGPVLVTGATGGVGSLAVSMLAKRGYTVEASTGKAAEHD 70

Query: 58  LLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVGGKMLDAVLLNMRIQGRITLC 117
            L+             E  +   ++    +      + VGG+ L  VL  MR  G + + 
Sbjct: 71  YLRVLGAK---EVLAREDVMAERIRPLDKQRWAAAVDPVGGRTLATVLSRMRYGGAVAVS 127

Query: 118 GMISQYNNDKPEGVHNLTCLISKRIRMEG 146
           G+              +   I + + + G
Sbjct: 128 GLTGGAEVPT-----TVHPFILRGVSLLG 151

>d1p0fa2 c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]} Length = 174

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Frog (Rana perezi) [TaxId: 8403]

 Score = 52.9 bits (126), Expect = 2e-09
 Identities = 25/172 (14%), Positives = 52/172 (30%), Gaps = 12/172 (6%)

Query: 3   GMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNK 62
             T Y           G    V    G VG       K  G   +   G+         +
Sbjct: 12  FATGYGAAVNTAKVTPGSTCAVFGL-GGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAIE 70

Query: 63  FGFDEAFNYKEEPD-LDAALKRYFPEGINIYFENVGGK--MLDAVLLNMRIQGRITLCGM 119
            G  E  N K+    +   +      G++   E  G    M++A+       G   + G+
Sbjct: 71  LGATECLNPKDYDKPIYEVICEKTNGGVDYAVECAGRIETMMNALQSTYCGSGVTVVLGL 130

Query: 120 ISQYNNDKPEGVHNLTCLISKRIRMEGFLVPDYFHLYPKFLEMMIPRIKEGK 171
               + ++   +  L  L  + ++  G +   +     + +  ++    + K
Sbjct: 131 ---ASPNERLPLDPLLLLTGRSLK--GSVFGGF---KGEEVSRLVDDYMKKK 174

>d1o8ca2 c.2.1.1 (A:116-192) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]} Length = 77

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

 Score = 48.4 bits (115), Expect = 8e-09
 Identities = 16/64 (25%), Positives = 24/64 (37%), Gaps = 3/64 (4%)

Query: 1  MPGMTAYAGFFEV---CSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVD 57
            G TA      +       Q   + V+ ASG VG         +G  VV  +G +   +
Sbjct: 11 TAGFTAMLCVMALEDAGVRPQDGEIVVTGASGGVGSTAVALLHKLGYQVVAVSGRESTHE 70

Query: 58 LLKN 61
           LK+
Sbjct: 71 YLKS 74

>d1jqba2 c.2.1.1 (A:1140-1313) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]} Length = 174

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Bacterial secondary alcohol dehydrogenase
species: Clostridium beijerinckii [TaxId: 1520]

 Score = 50.3 bits (119), Expect = 1e-08
 Identities = 30/171 (17%), Positives = 52/171 (30%), Gaps = 9/171 (5%)

Query: 2   PGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKN 61
              T + G  E+   + G  V V      VG +    AKL G   +   GS+        
Sbjct: 12  MMTTGFHGA-ELADIEMGSSVVVIGIGA-VGLMGIAGAKLRGAGRIIGVGSRPICVEAAK 69

Query: 62  KFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVGGKM-LDAVLLNMRIQGRITLCGMI 120
            +G  +  NYK     D  +K    +G++      GG   L   +  ++  G I+     
Sbjct: 70  FYGATDILNYKNGHIEDQVMKLTNGKGVDRVIMAGGGSETLSQAVKMVKPGGIISNINYH 129

Query: 121 SQYNNDKPEGVHNLTCLISKRIRMEGFLVPDYFHLYPKFLEMMIPRIKEGK 171
              +      V     +  K I+                 E +   +   +
Sbjct: 130 GSGDALLIPRVEWGCGMAHKTIKGGLCPGGRL------RAERLRDMVVYNR 174

>d1iz0a2 c.2.1.1 (A:99-269) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]} Length = 171

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Thermus thermophilus [TaxId: 274]

 Score = 47.8 bits (112), Expect = 1e-07
 Identities = 36/173 (20%), Positives = 62/173 (35%), Gaps = 16/173 (9%)

Query: 1   MPGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLK 60
           +  +TAY         + GE V V AA+GA+G    Q A+ +G  V+ +A   +K+ L  
Sbjct: 11  VSFLTAYLALKR-AQARPGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLALPL 69

Query: 61  NKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVGGKMLDAVLLNMRIQGRITLCGMI 120
                + A   +          R    G       V GK ++  L  +   GR+   G  
Sbjct: 70  ALGAEEAATYAEVPE-------RAKAWGGLDLVLEVRGKEVEESLGLLAHGGRLVYIGAA 122

Query: 121 SQYNNDKPEGVHNLTCLISKRIRMEGFLVPDYFH---LYPKFLEMMIPRIKEG 170
                           L+ + + + GF +        L  + L  ++PR+   
Sbjct: 123 EGEVAP-----IPPLRLMRRNLAVLGFWLTPLLREGALVEEALGFLLPRLGRE 170

>d1kola2 c.2.1.1 (A:161-355) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]} Length = 195

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Formaldehyde dehydrogenase
species: Pseudomonas putida [TaxId: 303]

 Score = 47.5 bits (112), Expect = 1e-07
 Identities = 31/193 (16%), Positives = 58/193 (30%), Gaps = 30/193 (15%)

Query: 2   PGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKN 61
              T Y G         G  V+V+ A G VG      A+L+G  VV              
Sbjct: 10  ILPTGYHGA-VTAGVGPGSTVYVAGA-GPVGLAAAASARLLGAAVVIVGDLNPARLAHAK 67

Query: 62  KFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVGG----------------KMLDAVL 105
             GF+ A    + P  +          ++   + VG                  +L++++
Sbjct: 68  AQGFEIADLSLDTPLHEQIAALLGEPEVDCAVDAVGFEARGHGHEGAKHEAPATVLNSLM 127

Query: 106 LNMRIQGRITLCGMISQYNNDKPEGVHNLTCL-------ISKRIRMEGFLVPDYFHLYPK 158
              R+ G+I + G+    +    +    +  L        +K         P       K
Sbjct: 128 QVTRVAGKIGIPGLYVTEDPGAVDAAAKIGSLSIRFGLGWAKSHSFHTGQTPV-----MK 182

Query: 159 FLEMMIPRIKEGK 171
           +   ++  I   +
Sbjct: 183 YNRALMQAIMWDR 195

>d1vj1a1 b.35.1.2 (A:-1-124,A:312-351) Putative zinc-binding alcohol dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]} Length = 166

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Putative zinc-binding alcohol dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 37.5 bits (86), Expect = 4e-04
 Identities = 4/28 (14%), Positives = 7/28 (25%)

Query: 1   MPGMTAYAGFFEVCSPKQGEYVFVSAAS 28
           +  M               + V +S  S
Sbjct: 137 LENMGVAFQSMMTGGNVGKQIVCISEDS 164

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	208
d1pqwa_	183	Putative enoyl reductase domain of polyketide synt	100.0
d1v3va2	182	Leukotriene b4 12-hydroxydehydrogenase/prostagland	100.0
d1vj1a2	187	Putative zinc-binding alcohol dehydrogenase {Mouse	99.98
d1yb5a2	174	Quinone oxidoreductase {Human (Homo sapiens) [TaxI	99.98
d1qora2	179	Quinone oxidoreductase {Escherichia coli [TaxId: 5	99.97
d1xa0a2	176	B. subtilis YhfP homologue {Bacillus stearothermop	99.97
d1f8fa2	174	Benzyl alcohol dehydrogenase {Acinetobacter calcoa	99.97
d1iz0a2	171	Quinone oxidoreductase {Thermus thermophilus [TaxI	99.96
d1jvba2	170	Alcohol dehydrogenase {Archaeon Sulfolobus solfata	99.96
d1gu7a2	189	2,4-dienoyl-CoA reductase {Yeast (Candida tropical	99.96
d1vj0a2	182	Hypothetical protein TM0436 {Thermotoga maritima [	99.96
d1llua2	166	Alcohol dehydrogenase {Pseudomonas aeruginosa [Tax	99.95
d1tt7a2	167	Hypothetical protein YhfP {Bacillus subtilis [TaxI	99.95
d1h2ba2	172	Alcohol dehydrogenase {Archaeon Aeropyrum pernix [	99.95
d1jqba2	174	Bacterial secondary alcohol dehydrogenase {Clostri	99.95
d1e3ia2	174	Alcohol dehydrogenase {Mouse (Mus musculus), class	99.95
d1piwa2	168	Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeas	99.95
d1rjwa2	168	Alcohol dehydrogenase {Bacillus stearothermophilus	99.95
d2fzwa2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	99.95
d1uufa2	168	Hypothetical protein YahK {Escherichia coli [TaxId	99.95
d1o89a2	177	Hypothetical protein YhdH {Escherichia coli [TaxId	99.95
d1p0fa2	174	Alcohol dehydrogenase {Frog (Rana perezi) [TaxId:	99.95
d1pl8a2	171	Ketose reductase (sorbitol dehydrogenase) {Human (	99.95
d1e3ja2	170	Ketose reductase (sorbitol dehydrogenase) {Silverl	99.94
d1kola2	195	Formaldehyde dehydrogenase {Pseudomonas putida [Ta	99.94
d2jhfa2	176	Alcohol dehydrogenase {Horse (Equus caballus) [Tax	99.94
d1cdoa2	175	Alcohol dehydrogenase {Cod (Gadus callarias) [TaxI	99.93
d1d1ta2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	99.93
d1o8ca2	77	Hypothetical protein YhdH {Escherichia coli [TaxId	99.67
d1q7ba_	243	beta-keto acyl carrier protein reductase {Escheric	98.85
d1pjca1	168	L-alanine dehydrogenase {Phormidium lapideum [TaxI	98.81
d1hxha_	253	3beta/17beta hydroxysteroid dehydrogenase {Comamon	98.78
d1ydea1	250	Retinal dehydrogenase/reductase 3 {Human (Homo sap	98.77
d1hdca_	254	3-alpha,20-beta-hydroxysteroid dehydrogenase {Stre	98.76
d2d1ya1	248	Hypothetical protein TTHA0369 {Thermus thermophilu	98.72
d1ulsa_	242	beta-keto acyl carrier protein reductase {Thermus	98.71
d1zema1	260	Xylitol dehydrogenase {Gluconobacter oxydans [TaxI	98.68
d1pr9a_	244	Carbonyl reductase {Human (Homo sapiens) [TaxId: 9	98.67
d1vl8a_	251	Gluconate 5-dehydrogenase {Thermotoga maritima [Ta	98.67
d2a4ka1	241	beta-keto acyl carrier protein reductase {Thermus	98.65
d1yb1a_	244	17-beta-hydroxysteroid dehydrogenase type XI {Huma	98.65
d1cyda_	242	Carbonyl reductase {Mouse (Mus musculus) [TaxId: 1	98.64
d1nffa_	244	Putative oxidoreductase Rv2002 {Mycobacterium tube	98.64
d1k2wa_	256	Sorbitol dehydrogenase {Rhodobacter sphaeroides [T	98.63
d1xq1a_	259	Tropinone reductase {Thale cress (Arabidopsis thal	98.6
d1xg5a_	257	Putative dehydrogenase ARPG836 (MGC4172) {Human (H	98.59
d1bdba_	276	Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Ps	98.59
d1wmaa1	275	Carbonyl reductase/20beta-hydroxysteroid dehydroge	98.58
d2c07a1	251	beta-keto acyl carrier protein reductase {Malaria	98.58
d2bgka1	268	Rhizome secoisolariciresinol dehydrogenase {Mayapp	98.58
d1luaa1	191	Methylene-tetrahydromethanopterin dehydrogenase {M	98.58
d2ae2a_	259	Tropinone reductase {Jimsonweed (Datura stramonium	98.56
d1zk4a1	251	R-specific alcohol dehydrogenase {Lactobacillus br	98.52
d2gdza1	254	15-hydroxyprostaglandin dehydrogenase, PGDH {Human	98.49
d1l7da1	183	Nicotinamide nucleotide transhydrogenase dI compon	98.48
d2ew8a1	247	(s)-1-phenylethanol dehydrogenase {Azoarcus sp. eb	98.47
d1xkqa_	272	Hypothetical protein R05D8.7 {Caenorhabditis elega	98.43
d1x1ta1	260	D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas	98.43
d1g0oa_	272	1,3,8-trihydroxynaphtalene reductase (THNR, naphto	98.43
d1ae1a_	258	Tropinone reductase {Jimsonweed (Datura stramonium	98.42
d1fmca_	255	7-alpha-hydroxysteroid dehydrogenase {Escherichia	98.41
d2ag5a1	245	Dehydrogenase/reductase SDR family member 6, DHRS6	98.41
d1iy8a_	258	Levodione reductase {Corynebacterium aquaticum [Ta	98.4
d1ja9a_	259	1,3,6,8-tetrahydroxynaphthalene reductase {Rice bl	98.4
d1dhra_	236	Dihydropteridin reductase (pteridine reductase) {R	98.4
d1gz6a_	302	(3R)-hydroxyacyl-CoA dehydrogenase domain of estra	98.39
d1xu9a_	269	11-beta-hydroxysteroid dehydrogenase 1 {Human (Hom	98.38
d1xhla_	274	Hypothetical protein F25D1.5 {Caenorhabditis elega	98.37
d1yxma1	297	Peroxisomal trans 2-enoyl CoA reductase {Human (Ho	98.37
d2rhca1	257	beta-keto acyl carrier protein reductase {Streptom	98.37
d1spxa_	264	Glucose dehydrogenase (5l265) {Nematode (Caenorhab	98.37
d1h5qa_	260	Mannitol dehydrogenase {Mushroom (Agaricus bisporu	98.35
d1w6ua_	294	2,4-dienoyl-CoA reductase, mitochondrial (DECR) {H	98.33
d1gpja2	159	Glutamyl tRNA-reductase middle domain {Archaeon Me	98.3
d1geea_	261	Glucose dehydrogenase {Bacillus megaterium [TaxId:	98.29
d1ulua_	256	Enoyl-ACP reductase {Thermus thermophilus [TaxId:	98.27
d1ooea_	235	Dihydropteridin reductase (pteridine reductase) {N	98.27
d1o5ia_	234	beta-keto acyl carrier protein reductase {Thermoto	98.25
d1edoa_	244	beta-keto acyl carrier protein reductase {Oil seed	98.24
d1gega_	255	meso-2,3-butanediol dehydrogenase {Klebsiella pneu	98.24
d2bd0a1	240	Bacterial sepiapterin reductase {Chlorobium tepidu	98.23
d1npya1	167	Shikimate 5-dehydrogenase-like protein HI0607 {Hae	98.23
d1zmta1	252	Halohydrin dehalogenase HheC {Agrobacterium tumefa	98.23
d1yo6a1	250	Putative carbonyl reductase sniffer {Caenorhabditi	98.21
d1jg1a_	215	Protein-L-isoaspartyl O-methyltransferase {Archaeo	98.18
d1dl5a1	213	Protein-L-isoaspartyl O-methyltransferase {Thermot	98.15
d1nyta1	170	Shikimate 5-dehydrogenase AroE {Escherichia coli [	98.14
d1sbya1	254	Drosophila alcohol dehydrogenase {Fly (Drosophila	98.09
d1uzma1	237	beta-keto acyl carrier protein reductase {Mycobact	98.08
d1kpia_	291	CmaA2 {Mycobacterium tuberculosis [TaxId: 1773]}	98.08
d1vbfa_	224	Protein-L-isoaspartyl O-methyltransferase {Sulfolo	98.06
d2o23a1	248	Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Ho	98.03
d1kpga_	285	CmaA1 {Mycobacterium tuberculosis [TaxId: 1773]}	98.01
d1yb2a1	250	Hypothetical protein Ta0852 {Thermoplasma acidophi	98.0
d2fr1a1	259	Erythromycin synthase, eryAI, 1st ketoreductase mo	98.0
d1jtva_	285	Human estrogenic 17beta-hydroxysteroid dehydrogena	97.99
d1snya_	248	Carbonyl reductase sniffer {Fruit fly (Drosophila	97.98
d1hdoa_	205	Biliverdin IX beta reductase {Human (Homo sapiens)	97.98
d1nkva_	245	Hypothetical Protein YjhP {Escherichia coli [TaxId	97.92
d1o54a_	266	Hypothetical protein TM0748 {Thermotoga maritima [	97.9
d2fk8a1	280	Methoxy mycolic acid synthase 4, Mma4 {Mycobacteri	97.89
d2pd4a1	274	Enoyl-ACP reductase {Helicobacter pylori [TaxId: 2	97.81
d1i1na_	224	Protein-L-isoaspartyl O-methyltransferase {Human (	97.75
d1lssa_	132	Ktn Mja218 {Archaeon Methanococcus jannaschii [Tax	97.74
d1e5qa1	182	Saccharopine reductase {Rice blast fungus (Magnapo	97.72
d2b25a1	324	Hypothetical protein FLJ20628 {Human (Homo sapiens	97.71
d1vi2a1	182	Putative shikimate dehydrogenase YdiB {Escherichia	97.69
d1xxla_	234	Hypothetical protein YcgJ {Bacillus subtilis [TaxI	97.69
d1li4a1	163	S-adenosylhomocystein hydrolase {Human (Homo sapie	97.69
d1l3ia_	186	Precorrin-6Y methyltransferase (CbiT) {Archaeon Me	97.67
d2o57a1	282	Putative sarcosine dimethylglycine methyltransfera	97.66
d2h7ma1	268	Enoyl-ACP reductase {Mycobacterium tuberculosis, T	97.65
d1pjza_	201	Thiopurine S-methyltransferase {Pseudomonas syring	97.63
d1oaaa_	259	Sepiapterin reductase {Mouse (Mus musculus) [TaxId	97.61
d1qsga_	258	Enoyl-ACP reductase {Escherichia coli [TaxId: 562]	97.61
d1r18a_	223	Protein-L-isoaspartyl O-methyltransferase {Fruit f	97.61
d1bg6a2	184	N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {A	97.6
d1zx0a1	229	Guanidinoacetate methyltransferase {Human (Homo sa	97.59
d1i9ga_	264	Probable methyltransferase Rv2118c {Mycobacterium	97.59
d1p77a1	171	Shikimate 5-dehydrogenase AroE {Haemophilus influe	97.55
d1vl5a_	231	Hypothetical protein BH2331 {Bacillus halodurans [	97.45
d1susa1	227	Caffeoyl-CoA O-methyltransferase {Alfalfa (Medicag	97.45
d1mxha_	266	Dihydropteridin reductase (pteridine reductase) {T	97.44
d2q46a1	252	Hypothetical protein At5g02240 (T7H20_290) {Thale	97.42
d2f1ka2	165	Prephenate dehydrogenase TyrA {Synechocystis sp. p	97.39
d2nxca1	254	PrmA-like protein TTHA0656 (TT0836) {Thermus therm	97.38
d2avna1	246	Hypothetical methyltransferase TM1389 {Thermotoga	97.37
d1e7wa_	284	Dihydropteridin reductase (pteridine reductase) {L	97.34
d2ahra2	152	Pyrroline-5-carboxylate reductase ProC {Streptococ	97.33
d1yqga2	152	Pyrroline-5-carboxylate reductase ProC {Neisseria	97.32
d1pjqa1	113	Siroheme synthase CysG, domain 1 {Salmonella typhi	97.26
d1y1pa1	342	Aldehyde reductase II {Sporobolomyces salmonicolor	97.25
d1r0ka2	150	1-deoxy-D-xylulose-5-phosphate reductoisomerase {Z	97.24
d1yl7a1	135	Dihydrodipicolinate reductase {Mycobacterium tuber	97.22
d2jfga1	93	UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase	97.21
d1d7oa_	297	Enoyl-ACP reductase {Oil seed rape (Brassica napus	97.2
d1j4aa1	197	D-lactate dehydrogenase {Lactobacillus helveticus	97.2
d2avda1	219	COMT domain-containing protein 1, COMTD1 {Human (H	97.18
d1u2za_	406	Catalytic, N-terminal domain of histone methyltran	97.18
d2bzga1	229	Thiopurine S-methyltransferase {Human (Homo sapien	97.17
d2hmva1	134	Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}	97.14
d1ygya1	184	Phosphoglycerate dehydrogenase {Mycobacterium tube	97.11
d1rkxa_	356	CDP-glucose-4,6-dehydratase {Yersinia pseudotuberc	97.11
d1uaya_	241	Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus t	97.09
d1q0qa2	151	1-deoxy-D-xylulose-5-phosphate reductoisomerase {E	97.02
d1v8ba1	163	S-adenosylhomocystein hydrolase {Plasmodium falcip	97.02
d2bkaa1	232	TAT-interacting protein TIP30 {Human (Homo sapiens	97.01
d1wzna1	251	Hypothetical methyltransferase PH1305 {Archaeon Py	96.97
d2as0a2	324	Hypothetical protein PH1915, middle and C-terminal	96.97
d1uh5a_	329	Enoyl-ACP reductase {Malaria parasite (Plasmodium	96.95
d1i24a_	393	Sulfolipid biosynthesis protein SQD1 {Thale cress	96.94
d1orra_	338	CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId:	96.93
d1jaya_	212	Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archae	96.9
d1fjha_	257	3-alpha-hydroxysteroid dehydrogenase {Comamonas te	96.9
d1g8aa_	227	Fibrillarin homologue {Archaeon Pyrococcus horikos	96.89
d2g5ca2	171	Prephenate dehydrogenase TyrA {Aquifex aeolicus [T	96.87
d1ve3a1	226	Hypothetical protein PH0226 {Archaeon Pyrococcus h	96.85
d1gdha1	191	D-glycerate dehydrogenase {Hyphomicrobium methylov	96.83
d1mx3a1	193	Transcription corepressor CtbP {Human (Homo sapien	96.78
d1vm6a3	128	Dihydrodipicolinate reductase {Thermotoga maritima	96.78
d2naca1	188	Formate dehydrogenase {Pseudomonas sp., strain 101	96.77
d1xvaa_	292	Glycine N-methyltransferase {Rat (Rattus norvegicu	96.77
d1vl0a_	281	DTDP-4-dehydrorhamnose reductase RfbD {Clostridium	96.77
d1nw3a_	328	Catalytic, N-terminal domain of histone methyltran	96.76
d1nvmb1	157	Acetaldehyde dehydrogenase (acylating) {Pseudomona	96.73
d1nt2a_	209	Fibrillarin homologue {Archaeon Archaeoglobus fulg	96.71
d1udca_	338	Uridine diphosphogalactose-4-epimerase (UDP-galact	96.69
d1p91a_	268	rRNA methyltransferase RlmA {Escherichia coli [Tax	96.67
d1qp8a1	181	Putative formate dehydrogenase {Archaeon Pyrobacul	96.64
d1vpda2	161	Hydroxyisobutyrate dehydrogenase {Salmonella typhi	96.61
d1c1da1	201	Phenylalanine dehydrogenase {Rhodococcus sp., M4 [	96.58
d1n7ha_	339	GDP-mannose 4,6-dehydratase {Thale-cress (Arabidop	96.56
d2frna1	260	Hypothetical protein PH0793 {Pyrococcus horikoshii	96.56
d1ws6a1	171	Methyltransferase TTHA0928 {Thermus thermophilus [	96.52
d1dusa_	194	Hypothetical protein MJ0882 {Archaeon Methanococcu	96.48
d1dxya1	199	D-2-hydroxyisocaproate dehydrogenase {Lactobacillu	96.48
d1db3a_	357	GDP-mannose 4,6-dehydratase {Escherichia coli [Tax	96.45
d1nvta1	177	Shikimate 5-dehydrogenase AroE {Archaeon Methanoco	96.44
d2pv7a2	152	Prephenate dehydrogenase TyrA {Haemophilus influen	96.44
d1g8sa_	230	Fibrillarin homologue {Archaeon Methanococcus jann	96.43
d2czca2	172	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	96.37
d2b69a1	312	UDP-glucuronate decarboxylase 1 {Human (Homo sapie	96.31
d2a35a1	212	Hypothetical protein PA4017 {Pseudomonas aeruginos	96.3
d2cl5a1	214	Catechol O-methyltransferase, COMT {Rat (Rattus no	96.28
d1xtpa_	254	Hypothetical protein Lmaj004091aaa (LmjF30.0810) {	96.27
d1wxxa2	318	Hypothetical protein TTHA1280, middle and C-termin	96.25
d1kjqa2	111	Glycinamide ribonucleotide transformylase PurT, N-	96.24
d1z45a2	347	Uridine diphosphogalactose-4-epimerase (UDP-galact	96.22
d1leha1	230	Leucine dehydrogenase {Bacillus sphaericus [TaxId:	96.2
d1p3da1	96	UDP-N-acetylmuramate-alanine ligase MurC {Haemophi	96.2
d1im8a_	225	Hypothetical protein HI0319 (YecO) {Haemophilus in	96.18
d1qyda_	312	Pinoresinol-lariciresinol reductase {Giant arborvi	96.17
d2i6ga1	198	Putative methyltransferase TehB {Salmonella typhim	96.15
d1xeaa1	167	Putative oxidoreductase VCA1048 {Vibrio cholerae [	96.14
d1ks9a2	167	Ketopantoate reductase PanE {Escherichia coli [Tax	96.11
d1ydwa1	184	Probable oxidoreductase At4g09670 {Thale cress (Ar	96.05
d1zh8a1	181	Hypothetical protein TM0312 {Thermotoga maritima [	96.02
d1xj5a_	290	Spermidine synthase {Thale cress (Arabidopsis thal	96.01
d1xgka_	350	Negative transcriptional regulator NmrA {Aspergill	96.0
d1mo9a2	121	NADH-dependent 2-ketopropyl coenzyme M oxidoreduct	96.0
d1n1ea2	189	Glycerol-3- phosphate dehydrogenase {Trypanosome (	95.98
d1sc6a1	188	Phosphoglycerate dehydrogenase {Escherichia coli [	95.9
d3etja2	78	N5-carboxyaminoimidazole ribonucleotide synthetase	95.9
d1cf2o1	171	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	95.9
d2c5aa1	363	GDP-mannose-3', 5'-epimerase {Thale cress (Arabido	95.9
d1oi7a1	121	Succinyl-CoA synthetase, alpha-chain, N-terminal (	95.89
d2gz1a1	154	Aspartate beta-semialdehyde dehydrogenase {Strepto	95.89
d1nhpa2	123	NADH peroxidase {Enterococcus faecalis [TaxId: 135	95.88
d2p7ia1	225	Hypothetical protein ECA1738 {Erwinia carotovora [	95.84
d3cuma2	162	Hydroxyisobutyrate dehydrogenase {Pseudomonas aeru	95.81
d3lada2	119	Dihydrolipoamide dehydrogenase {Azotobacter vinela	95.81
d1b7go1	178	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	95.78
d1onfa2	117	Glutathione reductase {Plasmodium falciparum [TaxI	95.77
d1id1a_	153	Rck domain from putative potassium channel Kch {Es	95.76
d2blla1	342	Polymyxin resistance protein ArnA (PrmI) {Escheric	95.75
d1rpna_	321	GDP-mannose 4,6-dehydratase {Pseudomonas aeruginos	95.73
d2nu7a1	119	Succinyl-CoA synthetase, alpha-chain, N-terminal (	95.72
d1ebda2	117	Dihydrolipoamide dehydrogenase {Bacillus stearothe	95.6
d2fhpa1	182	Putative methylase EF2452 {Enterococcus faecalis [	95.56
d2gh1a1	281	Methyltransferase BC2162 {Bacillus cereus [TaxId:	95.55
d2b2ca1	312	Spermidine synthase {Caenorhabditis elegans [TaxId	95.53
d2ex4a1	222	Adrenal gland protein AD-003 (C9orf32) {Human (Hom	95.47
d2voua1	265	Dihydroxypyridine hydroxylase DhpH {Arthrobacter n	95.44
d1gtea4	196	Dihydropyrimidine dehydrogenase, domain 2 {Pig (Su	95.43
d1oria_	316	Protein arginine N-methyltransferase 1, PRMT1 {Rat	95.42
d1qyca_	307	Phenylcoumaran benzylic ether reductase {Loblolly	95.42
d1euca1	130	Succinyl-CoA synthetase, alpha-chain, N-terminal (	95.42
d1jqea_	280	Histamine methyltransferase {Human (Homo sapiens)	95.38
d1ps9a3	179	2,4-dienoyl-CoA reductase, middle domain {Escheric	95.33
d2o07a1	285	Spermidine synthase {Human (Homo sapiens) [TaxId:	95.32
d1uira_	312	Spermidine synthase {Thermus thermophilus [TaxId:	95.31
d1mjfa_	276	Putative spermidine synthetase PF0127 (SpeE) {Arch	95.29
d1t4ba1	146	Aspartate beta-semialdehyde dehydrogenase {Escheri	95.2
d1j6ua1	89	UDP-N-acetylmuramate-alanine ligase MurC {Thermoto	95.19
d2pgda2	176	6-phosphogluconate dehydrogenase {Sheep (Ovis orie	95.17
d2dula1	375	N(2),N(2)-dimethylguanosine tRNA methyltransferase	95.16
d2b78a2	317	Hypothetical protein SMu776, middle and C-terminal	95.16
d1y8ca_	246	Putative methyltransferase CAC2371 {Clostridium ac	95.12
d1ri5a_	252	mRNA cap (Guanine N-7) methyltransferase {Fungus (	95.1
d1kyqa1	150	Bifunctional dehydrogenase/ferrochelatase Met8p, N	95.03
d1f0ya2	192	Short chain L-3-hydroxyacyl CoA dehydrogenase {Hum	95.01
d1gesa2	116	Glutathione reductase {Escherichia coli [TaxId: 56	95.0
d2g82a1	168	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	95.0
d1v59a2	122	Dihydrolipoamide dehydrogenase {Baker's yeast (Sac	94.98
d1iy9a_	274	Spermidine synthase {Bacillus subtilis [TaxId: 142	94.97
d1dssg1	169	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	94.96
d1d7ya2	121	NADH-dependent ferredoxin reductase, BphA4 {Pseudo	94.94
d1diha1	162	Dihydrodipicolinate reductase {Escherichia coli [T	94.9
d1dxla2	123	Dihydrolipoamide dehydrogenase {Garden pea (Pisum	94.87
d1ek6a_	346	Uridine diphosphogalactose-4-epimerase (UDP-galact	94.85
d2i76a2	153	Hypothetical protein TM1727 {Thermotoga maritima [	94.84
d2fcaa1	204	tRNA (guanine-N(7)-)-methyltransferase TrmB {Bacil	94.82
d1v9la1	242	Glutamate dehydrogenase {Pyrobaculum islandicum [T	94.81
d1ojta2	125	Dihydrolipoamide dehydrogenase {Neisseria meningit	94.75
d1seza1	373	Protoporphyrinogen oxidase {Tobacco (Nicotiana tab	94.72
d1txga2	180	Glycerol-3- phosphate dehydrogenase {Archaeoglobus	94.71
d1h6va2	122	Mammalian thioredoxin reductase {Rat (Rattus norve	94.69
d1tw3a2	253	Carminomycin 4-O-methyltransferase {Streptomyces p	94.67
d1m6ya2	192	TM0872, methyltransferase domain {Thermotoga marit	94.66
d1h6da1	221	Glucose-fructose oxidoreductase, N-terminal domain	94.66
d1sb8a_	341	UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomo	94.63
d1djqa3	233	Trimethylamine dehydrogenase, middle domain {Methy	94.63
d1n2sa_	298	dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {S	94.61
d3grsa2	125	Glutathione reductase {Human (Homo sapiens) [TaxId	94.55
d1q1ra2	133	Putidaredoxin reductase {Pseudomonas putida [TaxId	94.53
d1lvla2	115	Dihydrolipoamide dehydrogenase {Pseudomonas putida	94.49
d2hjsa1	144	Usg-1 protein homolog PA3116 {Pseudomonas aerugino	94.48
d1t2aa_	347	GDP-mannose 4,6-dehydratase {Human (Homo sapiens)	94.47
d1bgva1	255	Glutamate dehydrogenase {Clostridium symbiosum [Ta	94.41
d2igta1	309	Putative methyltransferase Atu0340 {Agrobacterium	94.39
d2fyta1	311	Protein arginine N-methyltransferase 3, PRMT3 {Hum	94.24
d1mlda1	144	Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982	94.24
d1i36a2	152	Conserved hypothetical protein MTH1747 {Archaeon M	94.24
d2fy8a1	129	Potassium channel-related protein MthK {Archaeon M	94.13
d2cvoa1	183	Putative semialdehyde dehydrogenase {Rice (Oryza s	94.06
d1k0ia1	292	p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas a	93.91
d1inla_	295	Spermidine synthase {Thermotoga maritima [TaxId: 2	93.89
d1xhca2	122	NADH oxidase /nitrite reductase {Pyrococcus furios	93.81
d1gado1	166	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	93.76
d1djqa2	156	Trimethylamine dehydrogenase, C-terminal domain {M	93.65
d1qzza2	256	Aclacinomycin-10-hydroxylase RdmB {Streptomyces pu	93.59
d1wg8a2	182	TM0872, methyltransferase domain {Thermus thermoph	93.59
d2iida1	370	L-aminoacid oxidase {Malayan pit viper (Calloselas	93.58
d1ldna1	148	Lactate dehydrogenase {Bacillus stearothermophilus	93.51
d1sqga2	284	Ribosomal RNA small subunit methyltransferase B, R	93.5
d1obfo1	173	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	93.49
d1wdka3	186	Fatty oxidation complex alpha subunit, middle doma	93.46
d1jw9b_	247	Molybdenum cofactor biosynthesis protein MoeB {Esc	93.41
d1hwxa1	293	Glutamate dehydrogenase {Cow (Bos taurus) [TaxId:	93.4
d1eq2a_	307	ADP-L-glycero-D-mannoheptose 6-epimerase {Escheric	93.39
d2ifta1	183	Putative methylase HI0767 {Haemophilus influenzae	93.11
d1lssa_	132	Ktn Mja218 {Archaeon Methanococcus jannaschii [Tax	92.98
d1q1ra1	185	Putidaredoxin reductase {Pseudomonas putida [TaxId	92.95
d3c96a1	288	Monooxygenase PhzS {Pseudomonas aeruginosa [TaxId:	92.95
d1b0aa1	166	Methylenetetrahydrofolate dehydrogenase/cyclohydro	92.9
d1tlta1	164	Virulence factor MviM {Escherichia coli [TaxId: 56	92.87
d2esra1	152	Putative methyltransferase SPy1538 {Streptococcus	92.85
d1pgja2	178	6-phosphogluconate dehydrogenase {Trypanosoma bruc	92.84
d1fcda1	186	Flavocytochrome c sulfide dehydrogenase, FCSD, fla	92.82
d1c0pa1	268	D-aminoacid oxidase, N-terminal domain {Rhodotorul	92.77
d1g6q1_	328	Arginine methyltransferase, HMT1 {Baker's yeast (S	92.74
d1vlma_	208	Possible histamine N-methyltransferase TM1293 {The	92.72
d1u8fo1	169	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	92.7
d1fl2a1	184	Alkyl hydroperoxide reductase subunit F (AhpF), C-	92.61
d1mb4a1	147	Aspartate beta-semialdehyde dehydrogenase {Vibrio	92.42
d2bhsa1	292	O-acetylserine sulfhydrylase (Cysteine synthase) {	92.39
d1dxla1	221	Dihydrolipoamide dehydrogenase {Garden pea (Pisum	92.11
d1e6ua_	315	GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (	92.11
d1b26a1	234	Glutamate dehydrogenase {Thermotoga maritima [TaxI	92.1
d1hdgo1	169	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	92.09
d2gqfa1	253	Hypothetical protein HI0933 {Haemophilus influenza	92.09
d2bi7a1	314	UDP-galactopyranose mutase, N-terminal domain {Kle	92.07
d2i0za1	251	Flavoprotein BC4706 {Bacillus cereus [TaxId: 1396]	92.07
d1pzga1	154	Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5	91.89
d1trba1	190	Thioredoxin reductase {Escherichia coli [TaxId: 56	91.76
d1gtea3	153	Dihydropyrimidine dehydrogenase, domain 3 {Pig (Su	91.57
d2dw4a2	449	Lysine-specific histone demethylase 1, LSD1 {Human	91.54
d1vkna1	176	N-acetyl-gamma-glutamyl-phosphate reductase ArgC {	91.47
d2b4ro1	166	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	91.27
d1ixka_	313	Hypothetical methyltransferase PH1374 {Archaeon Py	91.13
d1x7da_	340	Ornithine cyclodeaminase {Pseudomonas putida [TaxI	90.83
d1r6da_	322	dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces	90.58
d1lvla1	220	Dihydrolipoamide dehydrogenase {Pseudomonas putida	90.56
d1omoa_	320	Archaeal alanine dehydrogenase {Archaeon Archaeogl	90.55
d1b5qa1	347	Polyamine oxidase {Maize (Zea mays) [TaxId: 4577]}	90.52
d1gesa1	217	Glutathione reductase {Escherichia coli [TaxId: 56	90.51
d1wkva1	382	O-acetylserine sulfhydrylase (Cysteine synthase) {	90.48
d1feca2	117	Trypanothione reductase {Crithidia fasciculata [Ta	90.42
d1w4xa1	298	Phenylacetone monooxygenase {Thermobifida fusca [T	90.36
d1yovb1	426	UBA3 {Human (Homo sapiens) [TaxId: 9606]}	90.34
d1oc2a_	346	dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus	90.31
d1pn0a1	360	Phenol hydroxylase {Soil-living yeast (Trichosporo	90.27
d1kewa_	361	dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus	90.19
d1rm4a1	172	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	90.17
d1ebda1	223	Dihydrolipoamide dehydrogenase {Bacillus stearothe	90.05
d1z7wa1	320	O-acetylserine sulfhydrylase (Cysteine synthase) {	89.92
d2a14a1	257	Indolethylamine N-methyltransferase, INMT {Human (	89.9
d2ivda1	347	Protoporphyrinogen oxidase {Myxococcus xanthus [Ta	89.89
d1jbqa_	355	Cystathionine beta-synthase {Human (Homo sapiens)	89.8
d1f06a1	170	Diaminopimelic acid dehydrogenase (DAPDH) {Coryneb	89.72
d1id1a_	153	Rck domain from putative potassium channel Kch {Es	89.71
d1ojta1	229	Dihydrolipoamide dehydrogenase {Neisseria meningit	89.65
d1v59a1	233	Dihydrolipoamide dehydrogenase {Baker's yeast (Sac	89.63
d1j5pa4	132	Hypothetical protein TM1643 {Thermotoga maritima [	89.21
d1d5ta1	336	Guanine nucleotide dissociation inhibitor, GDI {Co	89.19
d2g17a1	179	N-acetyl-gamma-glutamyl-phosphate reductase ArgC {	89.16
d1tdja1	331	Threonine deaminase {Escherichia coli [TaxId: 562]	89.13
d2bcgg1	297	Guanine nucleotide dissociation inhibitor, GDI {Ba	89.13
d1i8ta1	298	UDP-galactopyranose mutase, N-terminal domain {Esc	88.96
d1vdca1	192	Thioredoxin reductase {Mouse-ear cress (Arabidopsi	88.86
d1y7la1	310	O-acetylserine sulfhydrylase (Cysteine synthase) {	88.81
d1ne2a_	197	Hypothetical protein Ta1320 {Archaeon Thermoplasma	88.64
d1yzha1	204	tRNA (guanine-N(7)-)-methyltransferase TrmB {Strep	88.47
d1y0pa2	308	Flavocytochrome c3 (respiratory fumarate reductase	88.36
d1o58a_	293	O-acetylserine sulfhydrylase (Cysteine synthase) {	88.28
d2nvwa1	237	Galactose/lactose metabolism regulatory protein GA	88.01
d3grsa1	221	Glutathione reductase {Human (Homo sapiens) [TaxId	88.0
d3lada1	229	Dihydrolipoamide dehydrogenase {Azotobacter vinela	87.85
d1zn7a1	178	Adenine PRTase {Human (Homo sapiens) [TaxId: 9606]	87.85
d2v5za1	383	Monoamine oxidase B {Human (Homo sapiens) [TaxId:	87.83
d2fy8a1	129	Potassium channel-related protein MthK {Archaeon M	87.76
d3cmco1	171	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	87.65
d1gy8a_	383	Uridine diphosphogalactose-4-epimerase (UDP-galact	87.65
d1aoga2	117	Trypanothione reductase {Trypanosoma cruzi [TaxId:	87.52
d1ryia1	276	Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]}	87.51
d2csua3	163	Acetate-CoA ligase alpha chain, AcdA, domains 2 an	87.5
d1mv8a2	202	GDP-mannose 6-dehydrogenase {Pseudomonas aeruginos	87.49
d1qo8a2	317	Flavocytochrome c3 (respiratory fumarate reductase	87.14
d2gv8a1	335	Flavin-dependent monoxygenase SPBP16F5.08c {Schizo	86.9
d1cjca2	230	Adrenodoxin reductase of mitochondrial p450 system	86.74
d1h6va1	235	Mammalian thioredoxin reductase {Rat (Rattus norve	86.5
d2g72a1	263	Phenylethanolamine N-methyltransferase, PNMTase {H	86.41
d1ps9a2	162	2,4-dienoyl-CoA reductase, C-terminal domain {Esch	86.24
d2gf3a1	281	Sarcosine oxidase {Bacillus sp., strain b0618 [Tax	86.01
d1a9xa3	127	Carbamoyl phosphate synthetase (CPS), large subuni	85.86
d1vl6a1	222	Malate oxidoreductase (malic enzyme) {Thermotoga m	85.75
d1d4ca2	322	Flavocytochrome c3 (respiratory fumarate reductase	85.74
d1gtma1	239	Glutamate dehydrogenase {Archaeon Pyrococcus furio	85.71
d1a9xa4	121	Carbamoyl phosphate synthetase (CPS), large subuni	85.7
d2blna2	203	Polymyxin resistance protein ArnA, N-terminal doma	85.6
d1rp0a1	278	Thiazole biosynthetic enzyme Thi4 {Thale cress(Ara	85.0
d2hmva1	134	Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}	84.99
d1u8xx1	167	Maltose-6'-phosphate glucosidase GlvA {Bacillus su	84.83
d2bs2a2	336	Fumarate reductase {Wolinella succinogenes [TaxId:	84.83
d1qb7a_	236	Adenine PRTase {Leishmania donovani [TaxId: 5661]}	84.7
d1onfa1	259	Glutathione reductase {Plasmodium falciparum [TaxI	84.69
d2ax3a2	211	Hypothetical protein TM0922, N-terminal domain {Th	84.67
d1mo9a1	261	NADH-dependent 2-ketopropyl coenzyme M oxidoreduct	84.53
d1dlja2	196	UDP-glucose dehydrogenase (UDPGDH) {Streptococcus	84.48
d2gmha1	380	Electron transfer flavoprotein-ubiquinone oxidored	84.43
d1nv8a_	271	N5-glutamine methyltransferase, HemK {Thermotoga m	84.38
d1lqta2	239	Ferredoxin:NADP reductase FprA {Mycobacterium tube	84.06
d1g2qa_	178	Adenine PRTase {Baker's yeast (Saccharomyces cerev	84.0
d2cula1	230	GidA-related protein TTHA1897 {Thermus thermophilu	84.0
d1m6ia2	137	Apoptosis-inducing factor (AIF) {Human (Homo sapie	83.98
d1hyea1	145	MJ0490, lactate/malate dehydrogenase {Archaeon Met	83.94
d1y6ja1	142	Lactate dehydrogenase {Clostridium thermocellum [T	83.23
d1jsxa_	207	Glucose-inhibited division protein B (GidB) {Esche	82.86
d1xdza_	239	Glucose-inhibited division protein B (GidB) {Bacil	82.84
d1llda1	143	Lactate dehydrogenase {Bifidobacterium longum, str	82.82
d1a4ia1	170	Methylenetetrahydrofolate dehydrogenase/cyclohydro	82.69
d1ez4a1	146	Lactate dehydrogenase {Lactobacillus pentosus [Tax	82.54
d2dt5a2	126	Transcriptional repressor Rex, C-terminal domain {	82.51
d2fpoa1	183	Methylase YhhF {Escherichia coli [TaxId: 562]}	82.37
d2b9ea1	293	NOL1R {Human (Homo sapiens) [TaxId: 9606]}	81.81
d2gv8a2	107	Flavin-dependent monoxygenase SPBP16F5.08c {Schizo	81.8

>d1pqwa_ c.2.1.1 (A:) Putative enoyl reductase domain of polyketide synthase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative enoyl reductase domain of polyketide synthase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=100.00  E-value=1.1e-33  Score=198.69  Aligned_cols=168  Identities=19%  Similarity=0.309  Sum_probs=147.4

Q ss_pred             chhhHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHHH
Q 028523            2 PGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAAL   81 (208)
Q Consensus         2 ~~~tA~~~l~~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~~   81 (208)
                      +++|||++|.+.+++++|++|||+||+|++|++++|+|+..|++|+++++++++.+.++ ++|++.++++++. ++.+++
T Consensus         9 ~~~TA~~al~~~~~~~~g~~VlI~ga~g~vG~~~iqla~~~g~~vi~~~~~~~~~~~l~-~~Ga~~vi~~~~~-~~~~~v   86 (183)
T d1pqwa_           9 AYLTAWHSLCEVGRLSPGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKREMLS-RLGVEYVGDSRSV-DFADEI   86 (183)
T ss_dssp             HHHHHHHHHHTTSCCCTTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHH-TTCCSEEEETTCS-THHHHH
T ss_pred             HHHHHHHHHHHHhCCCCCCEEEEECCCCCcccccchhhccccccceeeecccccccccc-cccccccccCCcc-CHHHHH
Confidence            68999999999999999999999999999999999999999999999999999999999 9999999999988 999999


Q ss_pred             HhHCCC-CccEEEeCCCchhHHHHHHhhccCCEEEEEecccccCCCCCCCccchHHHhhcceeEEEeecccc----ccch
Q 028523           82 KRYFPE-GINIYFENVGGKMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCLISKRIRMEGFLVPDY----FHLY  156 (208)
Q Consensus        82 ~~~~~~-~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~  156 (208)
                      ++.+++ |+|++|||+|++.++.++++|+++|+++.+|..+..+     ........+.+++++.++.....    +...
T Consensus        87 ~~~t~~~g~d~v~d~~g~~~~~~~~~~l~~~G~~v~~G~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  161 (183)
T d1pqwa_          87 LELTDGYGVDVVLNSLAGEAIQRGVQILAPGGRFIELGKKDVYA-----DASLGLAALAKSASFSVVDLDLNLKLQPARY  161 (183)
T ss_dssp             HHHTTTCCEEEEEECCCTHHHHHHHHTEEEEEEEEECSCGGGTT-----TCEEEGGGGTTTCEEEECCHHHHHHHCHHHH
T ss_pred             HHHhCCCCEEEEEecccchHHHHHHHHhcCCCEEEEEccCCCCC-----CcccchHHHhCCcEEEEEEccceeccCHHHH
Confidence            999987 9999999999999999999999999999998765421     12233455678889988876544    4555


Q ss_pred             HHHHHHHHHHHHCCCceeee
Q 028523          157 PKFLEMMIPRIKEGKIVYVE  176 (208)
Q Consensus       157 ~~~~~~~~~~~~~g~~~~~~  176 (208)
                      ++.++++.+++++|+++|.+
T Consensus       162 ~~~~~~v~~~i~~G~i~p~P  181 (183)
T d1pqwa_         162 RQLLQHILQHVADGKLEVLP  181 (183)
T ss_dssp             HHHHHHHHHHHHTTSSCCCC
T ss_pred             HHHHHHHHHHHHCCCCceeC
Confidence            77899999999999999853

>d1v3va2 c.2.1.1 (A:113-294) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase
species: Guinea pig (Cavia porcellus) [TaxId: 10141]

Probab=100.00  E-value=3.1e-33  Score=196.06  Aligned_cols=167  Identities=46%  Similarity=0.741  Sum_probs=144.5

Q ss_pred             chhhHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHHH
Q 028523            2 PGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAAL   81 (208)
Q Consensus         2 ~~~tA~~~l~~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~~   81 (208)
                      +++|||++|.+.+++++||+|||+||+|++|++++|+|+..|++||++++++++.++++ ++|+++++++++. ++.+.+
T Consensus        13 ~glTA~~al~~~~~v~~G~~VlV~ga~ggvG~~aiqlak~~Ga~vi~~~~~~~~~~~~~-~~Ga~~vi~~~~~-~~~~~~   90 (182)
T d1v3va2          13 PGLTAYFGLLEVCGVKGGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAYLK-QIGFDAAFNYKTV-NSLEEA   90 (182)
T ss_dssp             HHHHHHHHHHTTTCCCSSCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH-HTTCSEEEETTSC-SCHHHH
T ss_pred             HHHHHHHHHHHHhCCCCCCEEEEEeCCCchhHHHHHHHHccCCEEEEeCCCHHHHHHHH-hhhhhhhcccccc-cHHHHH
Confidence            57899999999999999999999999999999999999999999999999999999999 9999999999887 777766


Q ss_pred             HhHCCC-CccEEEeCCCchhHHHHHHhhccCCEEEEEecccccCCCC-CCCccchHHHhhcceeEEEeecccc-ccchHH
Q 028523           82 KRYFPE-GINIYFENVGGKMLDAVLLNMRIQGRITLCGMISQYNNDK-PEGVHNLTCLISKRIRMEGFLVPDY-FHLYPK  158 (208)
Q Consensus        82 ~~~~~~-~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~  158 (208)
                      .+.+.+ |+|+|||++|++.++.++++|+++|+++.+|..+.++... .....+...++.+++++.|++..++ ++...+
T Consensus        91 ~~~~~~~Gvd~v~D~vG~~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~l~~k~~ti~g~~~~~~~~~~~~~  170 (182)
T d1v3va2          91 LKKASPDGYDCYFDNVGGEFLNTVLSQMKDFGKIAICGAISVYNRMDQLPPGPSPESIIYKQLRIEGFIVYRWQGDVREK  170 (182)
T ss_dssp             HHHHCTTCEEEEEESSCHHHHHHHGGGEEEEEEEEECCCGGGTTCTTSCCBCCCHHHHHHTTCEEEECCGGGCCHHHHHH
T ss_pred             HHHhhcCCCceeEEecCchhhhhhhhhccCCCeEEeecceeeccccccCCCCcchHHHhhcCcEEEEEEEeccChHHHHH
Confidence            666555 9999999999999999999999999999999766543221 2234556788899999999988877 444567


Q ss_pred             HHHHHHHHHHCC
Q 028523          159 FLEMMIPRIKEG  170 (208)
Q Consensus       159 ~~~~~~~~~~~g  170 (208)
                      .++++++++++|
T Consensus       171 ~~~~l~~~i~~G  182 (182)
T d1v3va2         171 ALRDLMKWVLEG  182 (182)
T ss_dssp             HHHHHHHHHHTT
T ss_pred             HHHHHHHHHhCc
Confidence            889999999876

>d1vj1a2 c.2.1.1 (A:125-311) Putative zinc-binding alcohol dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative zinc-binding alcohol dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.98  E-value=1e-31  Score=188.82  Aligned_cols=169  Identities=37%  Similarity=0.620  Sum_probs=136.6

Q ss_pred             chhhHHHHHHHhcCCCCC--CEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHH
Q 028523            2 PGMTAYAGFFEVCSPKQG--EYVFVSAASGAVGQLVGQFAKLVGC-YVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLD   78 (208)
Q Consensus         2 ~~~tA~~~l~~~~~~~~g--~~vli~ga~g~vG~~a~qla~~~g~-~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~   78 (208)
                      +++|||++|.+.+++++|  ++|||+||+|+||++++|+||.+|+ .|++++.++++...+.+++|++.++|++++ ++.
T Consensus        12 ~glTA~~~l~~~~~~~~G~~etVLI~gaaGgVG~~aiQlak~~Ga~~vi~~~~~~e~~~~l~~~~gad~vi~~~~~-~~~   90 (187)
T d1vj1a2          12 PGLTSLIGVQEKGHISAGSNQTMVVSGAAGACGSLAGQIGHLLGCSRVVGICGTQEKCLFLTSELGFDAAVNYKTG-NVA   90 (187)
T ss_dssp             HHHHHHHHHHHHSCCCTTSCCEEEESSTTSTTGGGHHHHHHHTTCSEEEEEESSHHHHHHHHHHSCCSEEEETTSS-CHH
T ss_pred             HHHHHHHHHHHHhCCCCCCCCEEEEECCCchhhHHHHHHHHHcCCcceecccchHHHHhhhhhcccceEEeeccch-hHH
Confidence            688999999999999987  8899999999999999999999999 566677787777766658999999999988 999


Q ss_pred             HHHHhHCCCCccEEEeCCCchhHHHHHHhhccCCEEEEEecccccCCCCCC----CccchHHHhhcceeEEEeecccccc
Q 028523           79 AALKRYFPEGINIYFENVGGKMLDAVLLNMRIQGRITLCGMISQYNNDKPE----GVHNLTCLISKRIRMEGFLVPDYFH  154 (208)
Q Consensus        79 ~~~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~  154 (208)
                      +.+++.++.|+|+|||++|++.+..++++++++|+++.+|..++++...+.    ..........+++++.++.+.++.+
T Consensus        91 ~~~~~~~~~GvDvv~D~vGg~~~~~~~~~l~~~G~iv~~G~~s~~~~~~~~~~~~~~~~~~~~~~k~i~~~g~~~~~~~~  170 (187)
T d1vj1a2          91 EQLREACPGGVDVYFDNVGGDISNTVISQMNENSHIILCGQISQYNKDVPYPPPLPPAVEAIRKERNITRERFTVLNYKD  170 (187)
T ss_dssp             HHHHHHCTTCEEEEEESSCHHHHHHHHTTEEEEEEEEEC------------CCCCCHHHHHHHHHTTCEEEECCGGGCGG
T ss_pred             HHHHHHhccCceEEEecCCchhHHHHhhhccccccEEEeccccccccccccCCchHHHHHHHHHhcceEEEEeEecchHH
Confidence            999999877999999999999999999999999999999986654322111    1111233456889999988877777


Q ss_pred             chHHHHHHHHHHHHCCC
Q 028523          155 LYPKFLEMMIPRIKEGK  171 (208)
Q Consensus       155 ~~~~~~~~~~~~~~~g~  171 (208)
                      ...+.++++.+++.+|+
T Consensus       171 ~~~e~~~~l~~~i~~Gk  187 (187)
T d1vj1a2         171 KFEPGILQLSQWFKEGK  187 (187)
T ss_dssp             GHHHHHHHHHHHHHHTS
T ss_pred             HHHHHHHHHHHHHHCcC
Confidence            77888999999999885

>d1yb5a2 c.2.1.1 (A:121-294) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.98  E-value=1.9e-31  Score=185.68  Aligned_cols=155  Identities=26%  Similarity=0.348  Sum_probs=133.9

Q ss_pred             chhhHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHHH
Q 028523            2 PGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAAL   81 (208)
Q Consensus         2 ~~~tA~~~l~~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~~   81 (208)
                      +++|||++|.+.+++++|++|||+||+|++|++++|+++.+|++|+++++++++.+.++ ++|+++++|+++. ++.+.+
T Consensus        12 ~~~TA~~al~~~~~~~~g~~VlV~Ga~G~vG~~aiq~a~~~G~~vi~~~~~~~~~~~~~-~~Ga~~vi~~~~~-~~~~~i   89 (174)
T d1yb5a2          12 PYFTAYRALIHSACVKAGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQKIVL-QNGAHEVFNHREV-NYIDKI   89 (174)
T ss_dssp             HHHHHHHHHHTTSCCCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH-HTTCSEEEETTST-THHHHH
T ss_pred             HHHHHHHHHHHHhCCCCCCEEEEEeccccccccccccccccCccccccccccccccccc-ccCcccccccccc-cHHHHh
Confidence            57899999988899999999999999999999999999999999999999999999999 9999999999988 999999


Q ss_pred             HhHCCC-CccEEEeCCCchhHHHHHHhhccCCEEEEEecccccCCCCCCCccchHHHhhcceeEEEeeccccccchHHHH
Q 028523           82 KRYFPE-GINIYFENVGGKMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCLISKRIRMEGFLVPDYFHLYPKFL  160 (208)
Q Consensus        82 ~~~~~~-~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (208)
                      ++.+++ ++|++||++|++.++.++++|+++|+++.+|..+.       ...+...++.+++++.|+.+.+.   ..+.+
T Consensus        90 ~~~t~~~g~d~v~d~~g~~~~~~~~~~l~~~G~iv~~G~~~~-------~~~~~~~~~~k~~~i~g~~~~~~---~~~~~  159 (174)
T d1yb5a2          90 KKYVGEKGIDIIIEMLANVNLSKDLSLLSHGGRVIVVGSRGT-------IEINPRDTMAKESSIIGVTLFSS---TKEEF  159 (174)
T ss_dssp             HHHHCTTCEEEEEESCHHHHHHHHHHHEEEEEEEEECCCCSC-------EEECTHHHHTTTCEEEECCGGGC---CHHHH
T ss_pred             hhhhccCCceEEeecccHHHHHHHHhccCCCCEEEEEecCCC-------CCCCHHHHHHCCCEEEEEEecCC---CHHHH
Confidence            998887 89999999999999999999999999999986432       23556778889999999876543   13334


Q ss_pred             HHHHHHHH
Q 028523          161 EMMIPRIK  168 (208)
Q Consensus       161 ~~~~~~~~  168 (208)
                      +++.+++.
T Consensus       160 ~~~~~~l~  167 (174)
T d1yb5a2         160 QQYAAALQ  167 (174)
T ss_dssp             HHHHHHHH
T ss_pred             HHHHHHHH
Confidence            44444443

>d1qora2 c.2.1.1 (A:113-291) Quinone oxidoreductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Escherichia coli [TaxId: 562]

Probab=99.97  E-value=1.3e-30  Score=182.24  Aligned_cols=162  Identities=25%  Similarity=0.305  Sum_probs=134.8

Q ss_pred             chhhHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHHH
Q 028523            2 PGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAAL   81 (208)
Q Consensus         2 ~~~tA~~~l~~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~~   81 (208)
                      +++|||++|.+.+++++||+|+|+||+|++|++++|+|+..|++|+++++++++.+.++ ++|+++++|+++. ++.+++
T Consensus        12 ~~~TA~~al~~~~~l~~g~~Vlv~ga~g~vG~~~iqlak~~Ga~Vi~~~~s~~k~~~~~-~lGa~~vi~~~~~-d~~~~v   89 (179)
T d1qora2          12 KGLTVYYLLRKTYEIKPDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQSAL-KAGAWQVINYREE-DLVERL   89 (179)
T ss_dssp             HHHHHHHHHHTTSCCCTTCEEEESSTTBHHHHHHHHHHHHHTCEEEEEESSHHHHHHHH-HHTCSEEEETTTS-CHHHHH
T ss_pred             HHHHHHHHHHHHhCCCCCCEEEEEccccccchHHHHHHHHhCCeEeecccchHHHHHHH-hcCCeEEEECCCC-CHHHHH
Confidence            57899999999899999999999999999999999999999999999999999999999 9999999999987 999999


Q ss_pred             HhHCCC-CccEEEeCCCchhHHHHHHhhccCCEEEEEecccccCCCCCCCccchHHHhhc-ceeEEEeecccc---ccch
Q 028523           82 KRYFPE-GINIYFENVGGKMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCLISK-RIRMEGFLVPDY---FHLY  156 (208)
Q Consensus        82 ~~~~~~-~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~---~~~~  156 (208)
                      ++.+++ ++|+++|+.+++.+..++++++++|+++.++...+.     ....+...+..+ .+.+....+..+   ++..
T Consensus        90 ~~~t~g~g~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~-----~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~  164 (179)
T d1qora2          90 KEITGGKKVRVVYDSVGRDTWERSLDCLQRRGLMVSFGNSSGA-----VTGVNLGILNQKGSLYVTRPSLQGYITTREEL  164 (179)
T ss_dssp             HHHTTTCCEEEEEECSCGGGHHHHHHTEEEEEEEEECCCTTCC-----CCCBCTHHHHHTTSCEEECCCHHHHCCSHHHH
T ss_pred             HHHhCCCCeEEEEeCccHHHHHHHHHHHhcCCeeeecccccCC-----ccccchhhhhccceEEEEeeEEeeecCCHHHH
Confidence            999988 999999999999999999999999999999876642     222333333333 344444333322   3444


Q ss_pred             HHHHHHHHHHHHCC
Q 028523          157 PKFLEMMIPRIKEG  170 (208)
Q Consensus       157 ~~~~~~~~~~~~~g  170 (208)
                      .+.+.++.+++++|
T Consensus       165 ~~~~~~l~~lv~~G  178 (179)
T d1qora2         165 TEASNELFSLIASG  178 (179)
T ss_dssp             HHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHHCc
Confidence            56677888888887

>d1xa0a2 c.2.1.1 (A:119-294) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: B. subtilis YhfP homologue
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=99.97  E-value=6.4e-31  Score=181.82  Aligned_cols=161  Identities=21%  Similarity=0.270  Sum_probs=126.7

Q ss_pred             chhhHHHHHH---HhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHH
Q 028523            2 PGMTAYAGFF---EVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLD   78 (208)
Q Consensus         2 ~~~tA~~~l~---~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~   78 (208)
                      +++|||++++   +.+..++|++|||+||+|+||.+++|+|+.+|++|+++++++++.++++ ++|+++++||++  .+.
T Consensus        12 aglTA~~a~~~L~~~g~~~~g~~VLI~gaaGGVG~~aiQlak~~Ga~Viat~~s~~k~~~~~-~lGa~~vi~~~~--~~~   88 (176)
T d1xa0a2          12 AGFTAALSIHRLEEHGLTPERGPVLVTGATGGVGSLAVSMLAKRGYTVEASTGKAAEHDYLR-VLGAKEVLARED--VMA   88 (176)
T ss_dssp             HHHHHHHHHHHHHHTTCCGGGCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESCTTCHHHHH-HTTCSEEEECC------
T ss_pred             HHHHHHHHHHHHHHhCCCCCCCEEEEEeccchHHHHHHHHHHHcCCceEEecCchHHHHHHH-hcccceeeecch--hHH
Confidence            6789997754   4578899999999999999999999999999999999999999999999 999999999875  444


Q ss_pred             HHHHhHCCCCccEEEeCCCchhHHHHHHhhccCCEEEEEecccccCCCCCCCccchHHHhhcceeEEEeeccccccchHH
Q 028523           79 AALKRYFPEGINIYFENVGGKMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCLISKRIRMEGFLVPDYFHLYPK  158 (208)
Q Consensus        79 ~~~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  158 (208)
                      +.++...++++|+|||++|++.+..++++|+++|+++.+|...+     .....+...++.|++++.|.+....+   .+
T Consensus        89 ~~~~~~~~~gvD~vid~vgg~~~~~~l~~l~~~Griv~~G~~~g-----~~~~~~~~~~~~k~~~i~Gv~~~~~~---~~  160 (176)
T d1xa0a2          89 ERIRPLDKQRWAAAVDPVGGRTLATVLSRMRYGGAVAVSGLTGG-----AEVPTTVHPFILRGVSLLGIDSVYCP---MD  160 (176)
T ss_dssp             -----CCSCCEEEEEECSTTTTHHHHHHTEEEEEEEEECSCCSS-----SCCCCCSHHHHHTTCEEEECCSSSCC---HH
T ss_pred             HHHHHhhccCcCEEEEcCCchhHHHHHHHhCCCceEEEeecccC-----cccCCCHHHHHHCCcEEEEEeCCcCC---HH
Confidence            55544444599999999999999999999999999999998764     33456788899999999997654322   23


Q ss_pred             HHHHHHHHHHCCCcee
Q 028523          159 FLEMMIPRIKEGKIVY  174 (208)
Q Consensus       159 ~~~~~~~~~~~g~~~~  174 (208)
                      ...++.+.+ .|.++|
T Consensus       161 ~~~~~~~~l-ag~lkP  175 (176)
T d1xa0a2         161 LRLRIWERL-AGDLKP  175 (176)
T ss_dssp             HHHHHHHHH-HTTTCC
T ss_pred             HHHHHHHHH-hcccCC
Confidence            333444444 377766

>d1f8fa2 c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Benzyl alcohol dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

Probab=99.97  E-value=2.9e-29  Score=174.35  Aligned_cols=161  Identities=20%  Similarity=0.247  Sum_probs=140.2

Q ss_pred             chhhHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHH
Q 028523            2 PGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGC-YVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAA   80 (208)
Q Consensus         2 ~~~tA~~~l~~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g~-~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~   80 (208)
                      ++.|||+++.+.+++++|++|+|+|+ |++|++++|+++.+|+ +|+++++++++++.++ ++|+++++|+++. ++.++
T Consensus        12 a~~Ta~~a~~~~~~~~~g~~VlI~G~-G~iG~~~~~~ak~~g~~~v~~~~~~~~k~~~a~-~~Ga~~~i~~~~~-~~~~~   88 (174)
T d1f8fa2          12 GIQTGAGACINALKVTPASSFVTWGA-GAVGLSALLAAKVCGASIIIAVDIVESRLELAK-QLGATHVINSKTQ-DPVAA   88 (174)
T ss_dssp             HHHHHHHHHHTTTCCCTTCEEEEESC-SHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHH-HHTCSEEEETTTS-CHHHH
T ss_pred             HHHHHHHHHHHhhCCCCCCEEEEeCC-CHHHhhhhhcccccccceeeeeccHHHHHHHHH-HcCCeEEEeCCCc-CHHHH
Confidence            46899999989999999999999996 9999999999999999 6677888999999999 9999999999987 99999


Q ss_pred             HHhHCCCCccEEEeCCCc-hhHHHHHHhhccCCEEEEEecccccCCCCCCCccchHHHhhcceeEEEeeccccccchHHH
Q 028523           81 LKRYFPEGINIYFENVGG-KMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCLISKRIRMEGFLVPDYFHLYPKF  159 (208)
Q Consensus        81 ~~~~~~~~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (208)
                      +++.+++++|++|||+|+ +.++.++++++++|+++.+|....    .....++...++.+++++.|+...++.  .++.
T Consensus        89 i~~~t~gg~D~vid~~G~~~~~~~~~~~~~~~G~i~~~G~~~~----~~~~~~~~~~~~~k~~~i~Gs~~g~~~--~~~~  162 (174)
T d1f8fa2          89 IKEITDGGVNFALESTGSPEILKQGVDALGILGKIAVVGAPQL----GTTAQFDVNDLLLGGKTILGVVEGSGS--PKKF  162 (174)
T ss_dssp             HHHHTTSCEEEEEECSCCHHHHHHHHHTEEEEEEEEECCCCST----TCCCCCCHHHHHHTTCEEEECSGGGSC--HHHH
T ss_pred             HHHHcCCCCcEEEEcCCcHHHHHHHHhcccCceEEEEEeecCC----CcccccCHHHHHHCCCEEEEEEecCCC--hHHH
Confidence            999998899999999995 688999999999999999987542    123456778889999999998866542  2567


Q ss_pred             HHHHHHHHHCCC
Q 028523          160 LEMMIPRIKEGK  171 (208)
Q Consensus       160 ~~~~~~~~~~g~  171 (208)
                      ++++++++++|+
T Consensus       163 ~~~~~~l~~~Gk  174 (174)
T d1f8fa2         163 IPELVRLYQQGK  174 (174)
T ss_dssp             HHHHHHHHHTTS
T ss_pred             HHHHHHHHHcCC
Confidence            899999999885

>d1iz0a2 c.2.1.1 (A:99-269) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Thermus thermophilus [TaxId: 274]

Probab=99.96  E-value=9.8e-30  Score=176.13  Aligned_cols=137  Identities=26%  Similarity=0.346  Sum_probs=113.6

Q ss_pred             chhhHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHHH
Q 028523            2 PGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAAL   81 (208)
Q Consensus         2 ~~~tA~~~l~~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~~   81 (208)
                      +++|||++|.+ +++++|++|||+||+|++|++++|+||..|++|+++++++++.+.++ ++|+++++|+.+   ..+. 
T Consensus        12 ~~~TA~~al~~-~~~~~g~~VlI~ga~G~vG~~aiqlak~~G~~vi~~~~~~~~~~~~~-~lGa~~~i~~~~---~~~~-   85 (171)
T d1iz0a2          12 SFLTAYLALKR-AQARPGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLALPL-ALGAEEAATYAE---VPER-   85 (171)
T ss_dssp             HHHHHHHHHHH-TTCCTTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGGGSHHHH-HTTCSEEEEGGG---HHHH-
T ss_pred             HHHHHHHHHHH-hCCCCCCEEEEEeccccchhhhhhhhccccccccccccccccccccc-ccccceeeehhh---hhhh-
Confidence            57899999955 89999999999999999999999999999999999999999999999 999999998864   2222 


Q ss_pred             HhHCCC-CccEEEeCCCchhHHHHHHhhccCCEEEEEecccccCCCCCCCccchHHHhhcceeEEEeecccc
Q 028523           82 KRYFPE-GINIYFENVGGKMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCLISKRIRMEGFLVPDY  152 (208)
Q Consensus        82 ~~~~~~-~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  152 (208)
                        .+.+ |+|+|||++| +.+..++++++++|+++.+|..++     .....+...++.+++++.|+++.++
T Consensus        86 --~~~~~g~D~v~d~~G-~~~~~~~~~l~~~G~~v~~G~~~g-----~~~~~~~~~~~~k~~~i~g~~~~~~  149 (171)
T d1iz0a2          86 --AKAWGGLDLVLEVRG-KEVEESLGLLAHGGRLVYIGAAEG-----EVAPIPPLRLMRRNLAVLGFWLTPL  149 (171)
T ss_dssp             --HHHTTSEEEEEECSC-TTHHHHHTTEEEEEEEEEC------------CCCCTTHHHHTTCEEEECCHHHH
T ss_pred             --hhccccccccccccc-hhHHHHHHHHhcCCcEEEEeCCCC-----CCCCccHHHHHHCCcEEEEEeCcCh
Confidence              2333 8999999987 578999999999999999997653     3334566788899999999988765

>d1jvba2 c.2.1.1 (A:144-313) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

Probab=99.96  E-value=1.7e-28  Score=170.05  Aligned_cols=156  Identities=21%  Similarity=0.291  Sum_probs=138.5

Q ss_pred             chhhHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHH
Q 028523            2 PGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGC-YVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAA   80 (208)
Q Consensus         2 ~~~tA~~~l~~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g~-~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~   80 (208)
                      +++|||+++ +.+++++|++|+|+|++|++|++++|+++..|. +|+++++++++.+.++ ++|++.++++++. ++.++
T Consensus        12 ~~~Ta~~al-~~~~~~~g~~vlV~G~~G~vG~~~~~~~~~~g~~~V~~~~~~~~~~~~~~-~~Ga~~~i~~~~~-~~~~~   88 (170)
T d1jvba2          12 SGITTYRAV-RKASLDPTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAK-RAGADYVINASMQ-DPLAE   88 (170)
T ss_dssp             HHHHHHHHH-HHTTCCTTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHHH-HHTCSEEEETTTS-CHHHH
T ss_pred             HHHHHHHHH-HHhCCCCCCEEEEEeccccceeeeeecccccccccccccccchhhHHHHH-HcCCceeeccCCc-CHHHH
Confidence            568999999 558999999999999889999999999999996 9999999999999999 9999999999887 88888


Q ss_pred             HHhHCCC-CccEEEeCCCc-hhHHHHHHhhccCCEEEEEecccccCCCCCCCccchHHHhhcceeEEEeeccccccchHH
Q 028523           81 LKRYFPE-GINIYFENVGG-KMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCLISKRIRMEGFLVPDYFHLYPK  158 (208)
Q Consensus        81 ~~~~~~~-~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  158 (208)
                      +++.+.+ ++|++|||+|+ ..++.++++++++|+++.+|...      ....++...++.+++++.|++..+     .+
T Consensus        89 ~~~~~~~~~~d~vid~~g~~~~~~~a~~~l~~~G~iv~~G~~~------~~~~~~~~~~~~k~i~i~Gs~~~~-----~~  157 (170)
T d1jvba2          89 IRRITESKGVDAVIDLNNSEKTLSVYPKALAKQGKYVMVGLFG------ADLHYHAPLITLSEIQFVGSLVGN-----QS  157 (170)
T ss_dssp             HHHHTTTSCEEEEEESCCCHHHHTTGGGGEEEEEEEEECCSSC------CCCCCCHHHHHHHTCEEEECCSCC-----HH
T ss_pred             HHHHhhcccchhhhcccccchHHHhhhhhcccCCEEEEecccc------CccccCHHHHHhCCcEEEEEecCC-----HH
Confidence            8888877 89999999996 57899999999999999998754      234567788899999999998765     67


Q ss_pred             HHHHHHHHHHCCC
Q 028523          159 FLEMMIPRIKEGK  171 (208)
Q Consensus       159 ~~~~~~~~~~~g~  171 (208)
                      .++++++++++|+
T Consensus       158 d~~~~l~lv~~GK  170 (170)
T d1jvba2         158 DFLGIMRLAEAGK  170 (170)
T ss_dssp             HHHHHHHHHHTTS
T ss_pred             HHHHHHHHHHcCC
Confidence            7899999999885

>d1gu7a2 c.2.1.1 (A:161-349) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: 2,4-dienoyl-CoA reductase
species: Yeast (Candida tropicalis) [TaxId: 5482]

Probab=99.96  E-value=4.8e-29  Score=175.48  Aligned_cols=165  Identities=21%  Similarity=0.294  Sum_probs=134.0

Q ss_pred             CchhhHHHHHHHhcCCCCCCEEEEe-cCCchHHHHHHHHHHHcCCEEEEEeCCHH----HHHHHHHhcCCCeeEecCCC-
Q 028523            1 MPGMTAYAGFFEVCSPKQGEYVFVS-AASGAVGQLVGQFAKLVGCYVVGSAGSKD----KVDLLKNKFGFDEAFNYKEE-   74 (208)
Q Consensus         1 ~~~~tA~~~l~~~~~~~~g~~vli~-ga~g~vG~~a~qla~~~g~~v~~~~~s~~----~~~~~~~~~g~~~v~~~~~~-   74 (208)
                      ++++|||++|.+.+++++|++++|+ ||+|++|++++|+||++|++||+++++.+    ..+.++ ++|+++++++++. 
T Consensus        11 ~~~~TA~~~l~~~~~~~~g~~vli~~ga~g~vG~~aiqlAk~~Ga~vI~~v~~~~~~~~~~~~~~-~lGad~vi~~~~~~   89 (189)
T d1gu7a2          11 VNPLTAYLMLTHYVKLTPGKDWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDRPNLDEVVASLK-ELGATQVITEDQNN   89 (189)
T ss_dssp             THHHHHHHHHHSSSCCCTTTCEEEESCTTSHHHHHHHHHHHHHTCEEEEEECCCTTHHHHHHHHH-HHTCSEEEEHHHHH
T ss_pred             hHHHHHHHHHHHHhCCCCCCEEEEEeCCCchHHHHHHHHHhhcCCeEEEEEecccccchHHhhhh-hccccEEEeccccc
Confidence            4689999999999999999988885 78899999999999999999999986654    345667 8999999988643 


Q ss_pred             -ccHHHHHHhHC---CCCccEEEeCCCchhHHHHHHhhccCCEEEEEecccccCCCCCCCccchHHHhhcceeEEEeecc
Q 028523           75 -PDLDAALKRYF---PEGINIYFENVGGKMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCLISKRIRMEGFLVP  150 (208)
Q Consensus        75 -~~~~~~~~~~~---~~~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  150 (208)
                       .++.+.+++.+   ++++|++||++|++.+..++++|+++|+++.+|...+     .+...+...++.+++++.|+++.
T Consensus        90 ~~~~~~~v~~~~~~~g~~vdvv~D~vg~~~~~~~~~~l~~~G~~v~~G~~~~-----~~~~~~~~~l~~k~~~i~G~~~~  164 (189)
T d1gu7a2          90 SREFGPTIKEWIKQSGGEAKLALNCVGGKSSTGIARKLNNNGLMLTYGGMSF-----QPVTIPTSLYIFKNFTSAGFWVT  164 (189)
T ss_dssp             CGGGHHHHHHHHHHHTCCEEEEEESSCHHHHHHHHHTSCTTCEEEECCCCSS-----CCEEECHHHHHHSCCEEEECCHH
T ss_pred             hhHHHHHHHHHHhhccCCceEEEECCCcchhhhhhhhhcCCcEEEEECCccC-----CCccCcHHHHHHCCcEEEEEEeh
Confidence             13444455443   4489999999999999999999999999999997653     33456778888899999999876


Q ss_pred             cc----ccchHHHHHHHHHHHHCCC
Q 028523          151 DY----FHLYPKFLEMMIPRIKEGK  171 (208)
Q Consensus       151 ~~----~~~~~~~~~~~~~~~~~g~  171 (208)
                      .+    ++...+.+.++.+++++|+
T Consensus       165 ~~~~~~~~~~~~~~~~l~~l~~~Gk  189 (189)
T d1gu7a2         165 ELLKNNKELKTSTLNQIIAWYEEGK  189 (189)
T ss_dssp             HHHTTCHHHHHHHHHHHHHHHHHTC
T ss_pred             HhhhhCHHHHHHHHHHHHHHHHcCC
Confidence            65    3444577889999998875

>d1vj0a2 c.2.1.1 (A:156-337) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein TM0436
species: Thermotoga maritima [TaxId: 2336]

Probab=99.96  E-value=3.2e-28  Score=170.35  Aligned_cols=157  Identities=22%  Similarity=0.315  Sum_probs=130.9

Q ss_pred             chhhHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHH--
Q 028523            2 PGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGC-YVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLD--   78 (208)
Q Consensus         2 ~~~tA~~~l~~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g~-~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~--   78 (208)
                      +++|||+++.+.+++++|++|||+|+ |++|++++|+++++|+ +|+++++++++++.++ ++|++.++++++. +..  
T Consensus        12 ~~~ta~~al~~~~~~~~G~~VlV~Ga-G~iG~~~~~~ak~~Ga~~Vi~~~~~~~~~~~a~-~lGa~~vi~~~~~-~~~~~   88 (182)
T d1vj0a2          12 SGATAYHAFDEYPESFAGKTVVIQGA-GPLGLFGVVIARSLGAENVIVIAGSPNRLKLAE-EIGADLTLNRRET-SVEER   88 (182)
T ss_dssp             HHHHHHHHHHTCSSCCBTCEEEEECC-SHHHHHHHHHHHHTTBSEEEEEESCHHHHHHHH-HTTCSEEEETTTS-CHHHH
T ss_pred             HHHHHHHHHHHHhCCCCCCEEEEECC-Cccchhheecccccccccccccccccccccccc-cccceEEEecccc-chHHH
Confidence            57899999999899999999999996 9999999999999998 8999999999999999 9999999999876 543  


Q ss_pred             -HHHHhHCCC-CccEEEeCCCc-hhHHHHHHhhccCCEEEEEecccccCCCCCCCccch-HHHhhcceeEEEeecccccc
Q 028523           79 -AALKRYFPE-GINIYFENVGG-KMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNL-TCLISKRIRMEGFLVPDYFH  154 (208)
Q Consensus        79 -~~~~~~~~~-~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~  154 (208)
                       +.+.+.+++ |+|+||||+|+ ..++.++++++++|+++.+|....    ......+. ..++.+++++.|++..+   
T Consensus        89 ~~~i~~~~~~~g~Dvvid~vG~~~~~~~a~~~l~~~G~iv~~G~~~~----~~~~~~~~~~~l~~k~l~i~G~~~~~---  161 (182)
T d1vj0a2          89 RKAIMDITHGRGADFILEATGDSRALLEGSELLRRGGFYSVAGVAVP----QDPVPFKVYEWLVLKNATFKGIWVSD---  161 (182)
T ss_dssp             HHHHHHHTTTSCEEEEEECSSCTTHHHHHHHHEEEEEEEEECCCCSC----CCCEEECHHHHTTTTTCEEEECCCCC---
T ss_pred             HHHHHHhhCCCCceEEeecCCchhHHHHHHHHhcCCCEEEEEeecCC----CCccccccHHHHHHCCcEEEEEEeCC---
Confidence             446677777 89999999996 578999999999999999997542    12222333 34678999999998765   


Q ss_pred             chHHHHHHHHHHHHCC
Q 028523          155 LYPKFLEMMIPRIKEG  170 (208)
Q Consensus       155 ~~~~~~~~~~~~~~~g  170 (208)
                        ...+++++++++++
T Consensus       162 --~~~~~~~~~~i~~~  175 (182)
T d1vj0a2         162 --TSHFVKTVSITSRN  175 (182)
T ss_dssp             --HHHHHHHHHHHHTC
T ss_pred             --HHHHHHHHHHHHHC
Confidence              55677777877765

>d1llua2 c.2.1.1 (A:144-309) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.95  E-value=1.3e-27  Score=164.91  Aligned_cols=154  Identities=22%  Similarity=0.330  Sum_probs=131.2

Q ss_pred             chhhHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHHH
Q 028523            2 PGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAAL   81 (208)
Q Consensus         2 ~~~tA~~~l~~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~~   81 (208)
                      +++|||+++. .+++++|++|+|+|+ |++|++++|++|.+|++|+++++++++++.++ ++|+++++++++. +..+.+
T Consensus        12 a~~Ta~~al~-~~~~~~g~~VlV~Ga-G~vG~~~~~~ak~~G~~Vi~~~~~~~~~~~a~-~~Ga~~~i~~~~~-~~~~~~   87 (166)
T d1llua2          12 AGVTVYKGLK-QTNARPGQWVAISGI-GGLGHVAVQYARAMGLHVAAIDIDDAKLELAR-KLGASLTVNARQE-DPVEAI   87 (166)
T ss_dssp             HHHHHHHHHH-HHTCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-HTTCSEEEETTTS-CHHHHH
T ss_pred             HHHHHHHHHH-HhCCCCCCEEEEeec-cccHHHHHHHHHHcCCccceecchhhHHHhhh-ccCccccccccch-hHHHHH
Confidence            5789999995 589999999999985 99999999999999999999999999999999 9999999999987 888888


Q ss_pred             HhHCCCCccEEEeCCCchhHHHHHHhhccCCEEEEEecccccCCCCCCCccchHHHhhcceeEEEeeccccccchHHHHH
Q 028523           82 KRYFPEGINIYFENVGGKMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCLISKRIRMEGFLVPDYFHLYPKFLE  161 (208)
Q Consensus        82 ~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  161 (208)
                      ++.+.+..+.++++.+++.++.++++++++|+++.+|...+      ....+...++.+++++.|+...+     .+.++
T Consensus        88 ~~~~~g~~~~i~~~~~~~~~~~~~~~l~~~G~iv~~G~~~~------~~~~~~~~~~~k~~~i~Gs~~~~-----~~d~~  156 (166)
T d1llua2          88 QRDIGGAHGVLVTAVSNSAFGQAIGMARRGGTIALVGLPPG------DFPTPIFDVVLKGLHIAGSIVGT-----RADLQ  156 (166)
T ss_dssp             HHHHSSEEEEEECCSCHHHHHHHHTTEEEEEEEEECCCCSS------EEEEEHHHHHHTTCEEEECCSCC-----HHHHH
T ss_pred             HHhhcCCcccccccccchHHHHHHHHhcCCcEEEEEEecCC------CccCCHHHHHhCCcEEEEEeecC-----HHHHH
Confidence            77665544444444457899999999999999999987542      34567788899999999988765     56688


Q ss_pred             HHHHHHHCC
Q 028523          162 MMIPRIKEG  170 (208)
Q Consensus       162 ~~~~~~~~g  170 (208)
                      ++++++++|
T Consensus       157 e~l~l~~~G  165 (166)
T d1llua2         157 EALDFAGEG  165 (166)
T ss_dssp             HHHHHHHTT
T ss_pred             HHHHHHHCc
Confidence            899999887

>d1tt7a2 c.2.1.1 (A:128-294) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhfP
species: Bacillus subtilis [TaxId: 1423]

Probab=99.95  E-value=2.2e-29  Score=172.91  Aligned_cols=143  Identities=23%  Similarity=0.316  Sum_probs=118.5

Q ss_pred             chhhHHHH---HHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHH
Q 028523            2 PGMTAYAG---FFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLD   78 (208)
Q Consensus         2 ~~~tA~~~---l~~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~   78 (208)
                      +++|||.+   |.+.+..+++++|||+||+|+||.+++|+||++|++|+++++++++.++++ ++|++.++++++.  ..
T Consensus         4 aGlTA~~a~~~L~~~g~~~~~~~VLV~gaaGgVG~~avQlAk~~Ga~Viat~~s~~k~~~~~-~lGad~vi~~~~~--~~   80 (167)
T d1tt7a2           4 AGFTAALSVHRLEQNGLSPEKGSVLVTGATGGVGGIAVSMLNKRGYDVVASTGNREAADYLK-QLGASEVISREDV--YD   80 (167)
T ss_dssp             HHHHHHHHHHHHHHTTCCGGGCCEEEESTTSHHHHHHHHHHHHHTCCEEEEESSSSTHHHHH-HHTCSEEEEHHHH--CS
T ss_pred             hHHHHHHHHHHHHHhcCCCCCCEEEEeCCcchHHHHHHHHHHHcCCceEEEecCHHHHHHHH-hhcccceEeccch--hc
Confidence            57788755   555566778889999999999999999999999999999999999999999 9999999987532  11


Q ss_pred             HHHHhHCCCCccEEEeCCCchhHHHHHHhhccCCEEEEEecccccCCCCCCCccchHHHhhcceeEEEeecccc
Q 028523           79 AALKRYFPEGINIYFENVGGKMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCLISKRIRMEGFLVPDY  152 (208)
Q Consensus        79 ~~~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  152 (208)
                      +.++...++++|+|||++|++.+..++++|+++|+++.+|...+     .....+...++.+++++.|+.....
T Consensus        81 ~~~~~~~~~gvd~vid~vgg~~~~~~~~~l~~~G~iv~~G~~~g-----~~~~~~~~~l~~k~~~i~G~~~~~~  149 (167)
T d1tt7a2          81 GTLKALSKQQWQGAVDPVGGKQLASLLSKIQYGGSVAVSGLTGG-----GEVPATVYPFILRGVSLLGIDSVYC  149 (167)
T ss_dssp             SCCCSSCCCCEEEEEESCCTHHHHHHHTTEEEEEEEEECCCSSC-----SCEEECSHHHHTSCCEEEECCSSSC
T ss_pred             hhhhcccCCCceEEEecCcHHHHHHHHHHhccCceEEEeeccCC-----CcccCCHHHHHHCCcEEEEEecCCC
Confidence            22222333489999999999999999999999999999998774     3445677889999999999775443

>d1h2ba2 c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Aeropyrum pernix [TaxId: 56636]

Probab=99.95  E-value=3.6e-27  Score=163.43  Aligned_cols=154  Identities=22%  Similarity=0.329  Sum_probs=131.5

Q ss_pred             chhhHHHHHHHhc-CCCCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHH
Q 028523            2 PGMTAYAGFFEVC-SPKQGEYVFVSAASGAVGQLVGQFAKLVGC-YVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDA   79 (208)
Q Consensus         2 ~~~tA~~~l~~~~-~~~~g~~vli~ga~g~vG~~a~qla~~~g~-~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~   79 (208)
                      +++|||+++.+.. .+++|++|+|+|+ |++|++++|+++++|+ +|+++++++++++.++ ++|+++++++.+. . .+
T Consensus        15 ~~~Ta~~al~~~~~~~~~g~~vli~Ga-G~vG~~~~~~a~~~g~~~vv~~~~~~~k~~~~~-~~ga~~~i~~~~~-~-~~   90 (172)
T d1h2ba2          15 AGITAYRAVKKAARTLYPGAYVAIVGV-GGLGHIAVQLLKVMTPATVIALDVKEEKLKLAE-RLGADHVVDARRD-P-VK   90 (172)
T ss_dssp             HHHHHHHHHHHHHTTCCTTCEEEEECC-SHHHHHHHHHHHHHCCCEEEEEESSHHHHHHHH-HTTCSEEEETTSC-H-HH
T ss_pred             HHHHHHHHHHHhhhccCCCCEEEEeCC-ChHHHHHHHHHHhhcCcccccccchhHHHHHHh-hcccceeecCccc-H-HH
Confidence            5789999998766 4899999999995 9999999999999998 8888898999999999 9999999998864 4 44


Q ss_pred             HHHhHCCC-CccEEEeCCCc-hhHHHHHHhhccCCEEEEEecccccCCCCCCCccchHHHhhcceeEEEeeccccccchH
Q 028523           80 ALKRYFPE-GINIYFENVGG-KMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCLISKRIRMEGFLVPDYFHLYP  157 (208)
Q Consensus        80 ~~~~~~~~-~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  157 (208)
                      ...+.+.+ ++|++|||+|+ ..++.++++++++|+++.+|...       ..+.+...++.+++++.|+...+     .
T Consensus        91 ~~~~~~~~~g~d~vid~~g~~~~~~~a~~~l~~~G~iv~~G~~~-------~~~~~~~~l~~k~~~i~Gs~~~~-----~  158 (172)
T d1h2ba2          91 QVMELTRGRGVNVAMDFVGSQATVDYTPYLLGRMGRLIIVGYGG-------ELRFPTIRVISSEVSFEGSLVGN-----Y  158 (172)
T ss_dssp             HHHHHTTTCCEEEEEESSCCHHHHHHGGGGEEEEEEEEECCCSS-------CCCCCHHHHHHTTCEEEECCSCC-----H
T ss_pred             HHHHhhCCCCceEEEEecCcchHHHHHHHHHhCCCEEEEEeCcc-------cccCCHHHHHhCCcEEEEEEecC-----H
Confidence            45556666 99999999996 57999999999999999998633       23466788899999999998876     5


Q ss_pred             HHHHHHHHHHHCCC
Q 028523          158 KFLEMMIPRIKEGK  171 (208)
Q Consensus       158 ~~~~~~~~~~~~g~  171 (208)
                      +.++++++++++|+
T Consensus       159 ~d~~~~l~l~~~GK  172 (172)
T d1h2ba2         159 VELHELVTLALQGK  172 (172)
T ss_dssp             HHHHHHHHHHHTTS
T ss_pred             HHHHHHHHHHHcCC
Confidence            66889999999885

>d1jqba2 c.2.1.1 (A:1140-1313) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Bacterial secondary alcohol dehydrogenase
species: Clostridium beijerinckii [TaxId: 1520]

Probab=99.95  E-value=1.3e-27  Score=165.55  Aligned_cols=158  Identities=20%  Similarity=0.176  Sum_probs=129.5

Q ss_pred             chhhHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHH
Q 028523            2 PGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGC-YVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAA   80 (208)
Q Consensus         2 ~~~tA~~~l~~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g~-~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~   80 (208)
                      +++|||+++ +.+++++|++|+|+|+ |++|++++|++|.+|+ +|+++++++++.+.++ ++|+++++++++. ++.+.
T Consensus        12 ~~~ta~~a~-~~a~~~~g~~VlI~Ga-G~vGl~~~q~ak~~Ga~~Vi~~d~~~~r~~~a~-~lGa~~~i~~~~~-~~~~~   87 (174)
T d1jqba2          12 MMTTGFHGA-ELADIEMGSSVVVIGI-GAVGLMGIAGAKLRGAGRIIGVGSRPICVEAAK-FYGATDILNYKNG-HIEDQ   87 (174)
T ss_dssp             HHHHHHHHH-HHTTCCTTCCEEEECC-SHHHHHHHHHHHTTTCSCEEEECCCHHHHHHHH-HHTCSEEECGGGS-CHHHH
T ss_pred             HHHHHHHHH-HHhCCCCCCEEEEEcC-CcchhhhhhhhhcccccccccccchhhhHHHHH-hhCccccccccch-hHHHH
Confidence            468999998 5689999999999985 9999999999999998 8999999999999999 9999999999887 89999


Q ss_pred             HHhHCCC-CccEEEeCCCc-hhHHHHHHhhccCCEEEEEecccccCCCCCCCcc--chHHHhhcceeEEEeeccccccch
Q 028523           81 LKRYFPE-GINIYFENVGG-KMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVH--NLTCLISKRIRMEGFLVPDYFHLY  156 (208)
Q Consensus        81 ~~~~~~~-~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~  156 (208)
                      +++.+++ |+|++|||+|+ ..++.++++++++|+++.+|.....    .....  .....+.++.++.++.....    
T Consensus        88 v~~~t~g~G~D~vid~~g~~~~~~~a~~~~~~~G~iv~~G~~~~~----~~~~~~~~~~~~~~~~~~i~g~~~~~~----  159 (174)
T d1jqba2          88 VMKLTNGKGVDRVIMAGGGSETLSQAVKMVKPGGIISNINYHGSG----DALLIPRVEWGCGMAHKTIKGGLCPGG----  159 (174)
T ss_dssp             HHHHTTTSCEEEEEECSSCTTHHHHHHHHEEEEEEEEECCCCCSS----SEEEEETTTTGGGTBCCEEEEBCCCCH----
T ss_pred             HHHHhhccCcceEEEccCCHHHHHHHHHHHhcCCEEEEEeecCCC----CcCcCcHhHHHHHhCccEEEEecCCCC----
Confidence            9999988 89999999995 6789999999999999999975431    11111  11223446677777665431    


Q ss_pred             HHHHHHHHHHHHCCC
Q 028523          157 PKFLEMMIPRIKEGK  171 (208)
Q Consensus       157 ~~~~~~~~~~~~~g~  171 (208)
                      +..++++.++++.|+
T Consensus       160 r~~~e~l~~li~~gk  174 (174)
T d1jqba2         160 RLRAERLRDMVVYNR  174 (174)
T ss_dssp             HHHHHHHHHHHHTTS
T ss_pred             cccHHHHHHHHHcCC
Confidence            456778888888874

>d1e3ia2 c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Mouse (Mus musculus), class II [TaxId: 10090]

Probab=99.95  E-value=3.2e-27  Score=163.42  Aligned_cols=159  Identities=16%  Similarity=0.176  Sum_probs=128.1

Q ss_pred             chhhHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHhcCCCeeEecCCCcc-HHH
Q 028523            2 PGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGC-YVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPD-LDA   79 (208)
Q Consensus         2 ~~~tA~~~l~~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g~-~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~-~~~   79 (208)
                      ++.|+|+++.+.+++++|++|+|+|+ |++|++++|+++.+|+ +|++++.++++++.++ ++|++.++++++.++ ...
T Consensus        12 a~~T~~~a~~~~a~v~~G~~VlV~G~-G~iGl~a~~~ak~~Ga~~Vi~~d~~~~r~~~a~-~~Ga~~~i~~~~~~~~~~~   89 (174)
T d1e3ia2          12 GFSSGYGAAINTAKVTPGSTCAVFGL-GCVGLSAIIGCKIAGASRIIAIDINGEKFPKAK-ALGATDCLNPRELDKPVQD   89 (174)
T ss_dssp             HHHHHHHHHHTTSCCCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHH-HTTCSEEECGGGCSSCHHH
T ss_pred             HHHHHHHHHHHhhCCCCCCEEEEECC-ChHHHHHHHHHHHhCCceeeeeccchHHHHHHH-HhCCCcccCCccchhhhhh
Confidence            57899999988999999999999985 9999999999999999 7999999999999999 999999998765423 344


Q ss_pred             HHHhHCCCCccEEEeCCCc-hhHHHHHHhhccC-CEEEEEecccccCCCCCCCccchHHHhhcceeEEEeeccccccchH
Q 028523           80 ALKRYFPEGINIYFENVGG-KMLDAVLLNMRIQ-GRITLCGMISQYNNDKPEGVHNLTCLISKRIRMEGFLVPDYFHLYP  157 (208)
Q Consensus        80 ~~~~~~~~~~d~v~d~~g~-~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  157 (208)
                      ..+...++|+|++|||+|. ..++.++++++++ |+++.+|...+      ...++...++ .+.++.|+...++..  .
T Consensus        90 ~~~~~~~~G~d~vie~~G~~~~~~~a~~~~~~g~G~~v~vG~~~~------~~~i~~~~~~-~~k~i~Gs~~Gs~~~--~  160 (174)
T d1e3ia2          90 VITELTAGGVDYSLDCAGTAQTLKAAVDCTVLGWGSCTVVGAKVD------EMTIPTVDVI-LGRSINGTFFGGWKS--V  160 (174)
T ss_dssp             HHHHHHTSCBSEEEESSCCHHHHHHHHHTBCTTTCEEEECCCSSS------EEEEEHHHHH-TTCEEEECSGGGCCH--H
T ss_pred             hHhhhhcCCCcEEEEecccchHHHHHHHHhhcCCeEEEecCCCCC------ccccchHHHh-ccCEEEEEEeeCCCh--H
Confidence            4444445599999999995 6899999999996 99999997542      2234444443 456888888766522  5


Q ss_pred             HHHHHHHHHHHCCC
Q 028523          158 KFLEMMIPRIKEGK  171 (208)
Q Consensus       158 ~~~~~~~~~~~~g~  171 (208)
                      +.++++++++.+|+
T Consensus       161 ~d~p~li~l~~~GK  174 (174)
T d1e3ia2         161 DSVPNLVSDYKNKK  174 (174)
T ss_dssp             HHHHHHHHHHHTTS
T ss_pred             HHHHHHHHHHHCcC
Confidence            67889999998875

>d1piwa2 c.2.1.1 (A:153-320) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Cinnamyl alcohol dehydrogenase, ADH6
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.95  E-value=5e-28  Score=167.17  Aligned_cols=154  Identities=18%  Similarity=0.182  Sum_probs=129.0

Q ss_pred             chhhHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHHH
Q 028523            2 PGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAAL   81 (208)
Q Consensus         2 ~~~tA~~~l~~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~~   81 (208)
                      +++|||+++. .+++++|++|+|+|+ |++|++++|++|.+|++|+++++++++.+.++ ++|+++++++.+.+++.+  
T Consensus        12 ag~Ta~~al~-~~~~~~g~~vlI~Ga-G~vG~~a~q~ak~~G~~vi~~~~~~~k~~~a~-~lGa~~~i~~~~~~~~~~--   86 (168)
T d1piwa2          12 GGLTVYSPLV-RNGCGPGKKVGIVGL-GGIGSMGTLISKAMGAETYVISRSSRKREDAM-KMGADHYIATLEEGDWGE--   86 (168)
T ss_dssp             HHHHHHHHHH-HTTCSTTCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSSTTHHHHH-HHTCSEEEEGGGTSCHHH--
T ss_pred             HHHHHHHHHH-HhCcCCCCEEEEECC-CCcchhHHHHhhhccccccccccchhHHHHhh-ccCCcEEeeccchHHHHH--
Confidence            4679999995 589999999999996 99999999999999999999999999999999 999999999876424433  


Q ss_pred             HhHCCCCccEEEeCCCch---hHHHHHHhhccCCEEEEEecccccCCCCCCCccchHHHhhcceeEEEeeccccccchHH
Q 028523           82 KRYFPEGINIYFENVGGK---MLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCLISKRIRMEGFLVPDYFHLYPK  158 (208)
Q Consensus        82 ~~~~~~~~d~v~d~~g~~---~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  158 (208)
                        ...+++|.++||+++.   .+..++++++++|+++.+|...+      ....+...++.+++++.|+...+     .+
T Consensus        87 --~~~~~~d~vi~~~~~~~~~~~~~~~~~l~~~G~iv~~G~~~~------~~~~~~~~~~~k~~~i~Gs~~g~-----~~  153 (168)
T d1piwa2          87 --KYFDTFDLIVVCASSLTDIDFNIMPKAMKVGGRIVSISIPEQ------HEMLSLKPYGLKAVSISYSALGS-----IK  153 (168)
T ss_dssp             --HSCSCEEEEEECCSCSTTCCTTTGGGGEEEEEEEEECCCCCS------SCCEEECGGGCBSCEEEECCCCC-----HH
T ss_pred             --hhhcccceEEEEecCCccchHHHHHHHhhccceEEEeccccc------cccccHHHHHhCCcEEEEEeeCC-----HH
Confidence              2334799999998842   47889999999999999997542      23455667788999999988766     66


Q ss_pred             HHHHHHHHHHCCCce
Q 028523          159 FLEMMIPRIKEGKIV  173 (208)
Q Consensus       159 ~~~~~~~~~~~g~~~  173 (208)
                      .++++++++++|+++
T Consensus       154 ~~~e~l~li~~gkIk  168 (168)
T d1piwa2         154 ELNQLLKLVSEKDIK  168 (168)
T ss_dssp             HHHHHHHHHHHTTCC
T ss_pred             HHHHHHHHHHhCCCC
Confidence            789999999999875

>d1rjwa2 c.2.1.1 (A:138-305) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=99.95  E-value=3.9e-27  Score=162.83  Aligned_cols=157  Identities=25%  Similarity=0.307  Sum_probs=136.8

Q ss_pred             chhhHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHHH
Q 028523            2 PGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAAL   81 (208)
Q Consensus         2 ~~~tA~~~l~~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~~   81 (208)
                      +++|||++++ ..++++|++|+|+|+ |++|++++|+++..|++|++++++++++++++ ++|++.++++++. ++.+.+
T Consensus        12 ~~~Ta~~al~-~~~~~~g~~vlv~G~-G~iG~~a~~~a~~~g~~v~~~~~~~~r~~~~k-~~Ga~~~~~~~~~-~~~~~~   87 (168)
T d1rjwa2          12 AGVTTYKALK-VTGAKPGEWVAIYGI-GGLGHVAVQYAKAMGLNVVAVDIGDEKLELAK-ELGADLVVNPLKE-DAAKFM   87 (168)
T ss_dssp             HHHHHHHHHH-HHTCCTTCEEEEECC-STTHHHHHHHHHHTTCEEEEECSCHHHHHHHH-HTTCSEEECTTTS-CHHHHH
T ss_pred             HHHHHHHHHH-HhCCCCCCEEEEeec-ccchhhhhHHHhcCCCeEeccCCCHHHhhhhh-hcCcceecccccc-hhhhhc
Confidence            5789999995 578999999999985 99999999999999999999999999999999 9999999999988 899999


Q ss_pred             HhHCCCCccEEEeCCCchhHHHHHHhhccCCEEEEEecccccCCCCCCCccchHHHhhcceeEEEeeccccccchHHHHH
Q 028523           82 KRYFPEGINIYFENVGGKMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCLISKRIRMEGFLVPDYFHLYPKFLE  161 (208)
Q Consensus        82 ~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  161 (208)
                      ++.+.+..|+++++.+.+.+..++++++++|+++.+|...      .....+...++.+++++.|+....     ++.++
T Consensus        88 ~~~~~~~~~~v~~~~~~~~~~~a~~~l~~~G~i~~~g~~~------~~~~~~~~~~~~~~~~i~gs~~~~-----~~~~~  156 (168)
T d1rjwa2          88 KEKVGGVHAAVVTAVSKPAFQSAYNSIRRGGACVLVGLPP------EEMPIPIFDTVLNGIKIIGSIVGT-----RKDLQ  156 (168)
T ss_dssp             HHHHSSEEEEEESSCCHHHHHHHHHHEEEEEEEEECCCCS------SEEEEEHHHHHHTTCEEEECCSCC-----HHHHH
T ss_pred             ccccCCCceEEeecCCHHHHHHHHHHhccCCceEeccccc------CCCCCCHHHHHHCCcEEEEEeeCC-----HHHHH
Confidence            9888775666665555788999999999999999998765      234567788899999999988765     67799


Q ss_pred             HHHHHHHCCCce
Q 028523          162 MMIPRIKEGKIV  173 (208)
Q Consensus       162 ~~~~~~~~g~~~  173 (208)
                      ++++++++|+++
T Consensus       157 ~~l~l~~~Gkik  168 (168)
T d1rjwa2         157 EALQFAAEGKVK  168 (168)
T ss_dssp             HHHHHHHTTSCC
T ss_pred             HHHHHHHhCCCC
Confidence            999999999875

>d2fzwa2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=99.95  E-value=1.8e-26  Score=160.59  Aligned_cols=162  Identities=19%  Similarity=0.203  Sum_probs=130.2

Q ss_pred             chhhHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHhcCCCeeEecCCC-ccHHH
Q 028523            2 PGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGC-YVVGSAGSKDKVDLLKNKFGFDEAFNYKEE-PDLDA   79 (208)
Q Consensus         2 ~~~tA~~~l~~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g~-~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~-~~~~~   79 (208)
                      ++.|||+++.+.+++++||+|+|+|+ |++|++++|+++.+|+ +|+++++++++.+.++ ++|+++++++.+. +...+
T Consensus        12 a~~Tay~al~~~~~~~~G~tVlI~Ga-GGvG~~aiq~ak~~G~~~vi~~~~~~~k~~~ak-~lGa~~~i~~~~~~~~~~~   89 (176)
T d2fzwa2          12 GISTGYGAAVNTAKLEPGSVCAVFGL-GGVGLAVIMGCKVAGASRIIGVDINKDKFARAK-EFGATECINPQDFSKPIQE   89 (176)
T ss_dssp             HHHHHHHHHHTTTCCCTTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHH-HHTCSEEECGGGCSSCHHH
T ss_pred             HHHHHHHHHHHhhCCCCCCEEEEecc-hhHHHHHHHHHHHHhcCceEEEcccHHHHHHHH-HhCCcEEEeCCchhhHHHH
Confidence            57899999988899999999999997 8999999999999997 8888888899999999 9999999998753 25666


Q ss_pred             HHHhHCCCCccEEEeCCCc-hhHHHHHHhhccCCEEEEEecccccCCCCCCCccchHHHhhcceeEEEeeccccccchHH
Q 028523           80 ALKRYFPEGINIYFENVGG-KMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCLISKRIRMEGFLVPDYFHLYPK  158 (208)
Q Consensus        80 ~~~~~~~~~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  158 (208)
                      .++..+++++|++||++|+ ..++.+..+++++|+++.++.....    .....+....+.+++++.|+...+...  .+
T Consensus        90 ~~~~~~~~g~D~vid~~G~~~~~~~~~~~~~~g~~~~~v~~~~~~----~~~~~~~~~~~~~~~~i~Gs~~G~~~~--~~  163 (176)
T d2fzwa2          90 VLIEMTDGGVDYSFECIGNVKVMRAALEACHKGWGVSVVVGVAAS----GEEIATRPFQLVTGRTWKGTAFGGWKS--VE  163 (176)
T ss_dssp             HHHHHTTSCBSEEEECSCCHHHHHHHHHTBCTTTCEEEECSCCCT----TCCEEECTHHHHTTCEEEECSGGGCCH--HH
T ss_pred             HHHHHcCCCCcEeeecCCCHHHHHHHHHhhcCCceeEEEEeeccc----cccccccHHHHHCCCEEEEEeeeCCcH--HH
Confidence            6677776799999999996 5678888899999888877654421    122223344456788999988766432  56


Q ss_pred             HHHHHHHHHHCCC
Q 028523          159 FLEMMIPRIKEGK  171 (208)
Q Consensus       159 ~~~~~~~~~~~g~  171 (208)
                      .+.++++++.+|+
T Consensus       164 d~~~li~l~~~GK  176 (176)
T d2fzwa2         164 SVPKLVSEYMSKK  176 (176)
T ss_dssp             HHHHHHHHHHTTS
T ss_pred             HHHHHHHHHHcCC
Confidence            7889999998885

>d1uufa2 c.2.1.1 (A:145-312) Hypothetical protein YahK {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YahK
species: Escherichia coli [TaxId: 562]

Probab=99.95  E-value=7.1e-27  Score=161.37  Aligned_cols=153  Identities=24%  Similarity=0.302  Sum_probs=125.0

Q ss_pred             chhhHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHHH
Q 028523            2 PGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAAL   81 (208)
Q Consensus         2 ~~~tA~~~l~~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~~   81 (208)
                      +++|+|+++ +.+++++|++|+|+|+ |++|++++|++|++|+++++++++++++++++ ++|++.++++.+. +...  
T Consensus        15 ag~Tay~al-~~~~~~~G~~VlI~Ga-G~vG~~a~qlak~~Ga~~i~~~~~~~~~~~a~-~lGad~~i~~~~~-~~~~--   88 (168)
T d1uufa2          15 AGITTYSPL-RHWQAGPGKKVGVVGI-GGLGHMGIKLAHAMGAHVVAFTTSEAKREAAK-ALGADEVVNSRNA-DEMA--   88 (168)
T ss_dssp             HHHHHHHHH-HHTTCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSGGGHHHHH-HHTCSEEEETTCH-HHHH--
T ss_pred             HHHHHHHHH-HHhCCCCCCEEEEecc-chHHHHHHHHhhcccccchhhccchhHHHHHh-ccCCcEEEECchh-hHHH--
Confidence            456899999 5689999999999985 99999999999999999999999999999999 9999999998875 3221  


Q ss_pred             HhHCCCCccEEEeCCCc-hhHHHHHHhhccCCEEEEEecccccCCCCCCCccchHHHhhcceeEEEeeccccccchHHHH
Q 028523           82 KRYFPEGINIYFENVGG-KMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCLISKRIRMEGFLVPDYFHLYPKFL  160 (208)
Q Consensus        82 ~~~~~~~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (208)
                        ...+++|++||++|+ ..+..++++++++|+++.+|...+     +....+...++.+++++.|+...+     .+.+
T Consensus        89 --~~~~~~D~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~-----~~~~~~~~~l~~k~~~i~Gs~~~~-----~~d~  156 (168)
T d1uufa2          89 --AHLKSFDFILNTVAAPHNLDDFTTLLKRDGTMTLVGAPAT-----PHKSPEVFNLIMKRRAIAGSMIGG-----IPET  156 (168)
T ss_dssp             --TTTTCEEEEEECCSSCCCHHHHHTTEEEEEEEEECCCC------------CHHHHHTTTCEEEECCSCC-----HHHH
T ss_pred             --HhcCCCceeeeeeecchhHHHHHHHHhcCCEEEEeccCCC-----CcccccHHHHHHCCcEEEEEeecC-----HHHH
Confidence              112379999999995 579999999999999999997553     233456677888999999998766     6668


Q ss_pred             HHHHHHHHCCCc
Q 028523          161 EMMIPRIKEGKI  172 (208)
Q Consensus       161 ~~~~~~~~~g~~  172 (208)
                      +++++++++++|
T Consensus       157 ~e~l~l~a~~~I  168 (168)
T d1uufa2         157 QEMLDFCAEHGI  168 (168)
T ss_dssp             HHHHHHHHHHTC
T ss_pred             HHHHHHHHHcCC
Confidence            889998887654

>d1o89a2 c.2.1.1 (A:116-292) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=99.95  E-value=4.3e-28  Score=167.90  Aligned_cols=157  Identities=20%  Similarity=0.266  Sum_probs=126.2

Q ss_pred             chhhHHHHHH---HhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHH
Q 028523            2 PGMTAYAGFF---EVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLD   78 (208)
Q Consensus         2 ~~~tA~~~l~---~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~   78 (208)
                      +++|||++++   +.+..+++++|||+||+|++|.+++|+||.+|++|+++++++++.+.++ ++|+++++||++. ++.
T Consensus        12 aGlTA~~a~~~l~~~g~~~~~~~vlV~gasGGVG~~aiQlAk~~Ga~Via~~~~~~k~~~~~-~lGad~vi~~~~~-~~~   89 (177)
T d1o89a2          12 AGFTAMLCVMALEDAGVRPQDGEIVVTGASGGVGSTAVALLHKLGYQVVAVSGRESTHEYLK-SLGASRVLPRDEF-AES   89 (177)
T ss_dssp             HHHHHHHHHHHHHHTTCCGGGCEEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHHH-HHTEEEEEEGGGS-SSC
T ss_pred             HHHHHHHHHHHHHHhCCCCCCCcEEEEEccccchHHHHHHHHHcCCCeEEEecchhHHHHHH-hhccccccccccH-HHH
Confidence            6789997764   3345566779999999999999999999999999999999999999999 9999999999865 432


Q ss_pred             HHHHhHCCCCccEEEeCCCchhHHHHHHhhccCCEEEEEecccccCCCCCCCccchHHHhhcceeEEEeecccc-ccchH
Q 028523           79 AALKRYFPEGINIYFENVGGKMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCLISKRIRMEGFLVPDY-FHLYP  157 (208)
Q Consensus        79 ~~~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~  157 (208)
                         +.+....+|.++|+++++.+..++++|+++|+++.+|...+.     ....+...++.+++++.|++.... ++...
T Consensus        90 ---~~l~~~~~~~vvD~Vgg~~~~~~l~~l~~~Griv~~G~~~~~-----~~~~~~~~~~~k~~~i~G~~~~~~~~~~~~  161 (177)
T d1o89a2          90 ---RPLEKQVWAGAIDTVGDKVLAKVLAQMNYGGCVAACGLAGGF-----TLPTTVMPFILRNVRLQGVDSVMTPPERRA  161 (177)
T ss_dssp             ---CSSCCCCEEEEEESSCHHHHHHHHHTEEEEEEEEECCCTTCS-----CCCCCSHHHHHHCCEEEECCSSSCCHHHHH
T ss_pred             ---HHHHhhcCCeeEEEcchHHHHHHHHHhccccceEeecccCCc-----cccccHHHHHHCCCeEEEEecccCCHHHHH
Confidence               222334689999999999999999999999999999987652     334566788899999999876543 44445


Q ss_pred             HHHHHHHHHHH
Q 028523          158 KFLEMMIPRIK  168 (208)
Q Consensus       158 ~~~~~~~~~~~  168 (208)
                      +.++++.+.+.
T Consensus       162 ~~~~~L~~~l~  172 (177)
T d1o89a2         162 QAWQRLVADLP  172 (177)
T ss_dssp             HHHHHHHHHSC
T ss_pred             HHHHHHHHhcc
Confidence            56666665543

>d1p0fa2 c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Frog (Rana perezi) [TaxId: 8403]

Probab=99.95  E-value=2.2e-26  Score=159.42  Aligned_cols=160  Identities=17%  Similarity=0.163  Sum_probs=128.1

Q ss_pred             chhhHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHhcCCCeeEecCCCcc-HHH
Q 028523            2 PGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGC-YVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPD-LDA   79 (208)
Q Consensus         2 ~~~tA~~~l~~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g~-~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~-~~~   79 (208)
                      ++.|||+++.+.+++++||+|+|+|+ |++|++++|+++++|+ +|+++++++++++.++ ++|+++++|+++.++ ..+
T Consensus        11 a~~Ta~~a~~~~a~~~~G~~VlV~Ga-GgvGl~a~~~ak~~G~~~Vi~~d~~~~kl~~a~-~lGa~~~i~~~~~d~~~~~   88 (174)
T d1p0fa2          11 GFATGYGAAVNTAKVTPGSTCAVFGL-GGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAI-ELGATECLNPKDYDKPIYE   88 (174)
T ss_dssp             HHHHHHHHHHTTTCCCTTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHH-HTTCSEEECGGGCSSCHHH
T ss_pred             HHHHHHHHHHHhhCCCCCCEEEEECC-CchhHHHHHHHHHcCCceeeccCChHHHHHHHH-HcCCcEEEcCCCchhHHHH
Confidence            57899999989899999999999995 9999999999999998 8999999999999999 999999999876533 455


Q ss_pred             HHHhHCCCCccEEEeCCCc-hhHHHHHHhhcc-CCEEEEEecccccCCCCCCCccchHHHhhcceeEEEeeccccccchH
Q 028523           80 ALKRYFPEGINIYFENVGG-KMLDAVLLNMRI-QGRITLCGMISQYNNDKPEGVHNLTCLISKRIRMEGFLVPDYFHLYP  157 (208)
Q Consensus        80 ~~~~~~~~~~d~v~d~~g~-~~~~~~~~~l~~-~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  157 (208)
                      ..+..+++++|++||++|+ +.+..++..+.+ +|+++.+|....    ....+++. ..+.+++++.|+...++.   .
T Consensus        89 ~~~~~~~~G~d~vid~~g~~~~~~~~~~~~~~~~G~~v~vG~~~~----~~~~~~~~-~~~~~~~~i~Gs~~G~~~---~  160 (174)
T d1p0fa2          89 VICEKTNGGVDYAVECAGRIETMMNALQSTYCGSGVTVVLGLASP----NERLPLDP-LLLLTGRSLKGSVFGGFK---G  160 (174)
T ss_dssp             HHHHHTTSCBSEEEECSCCHHHHHHHHHTBCTTTCEEEECCCCCT----TCCEEECT-HHHHTTCEEEECSGGGCC---G
T ss_pred             HHHHhcCCCCcEEEEcCCCchHHHHHHHHHHHhcCceEEEEEecC----ccccccCH-HHHhCCCEEEEEEeCCCC---H
Confidence            5555566699999999995 678888888877 599999997542    12222332 234567899998876642   3


Q ss_pred             HHHHHHHHHHHCCC
Q 028523          158 KFLEMMIPRIKEGK  171 (208)
Q Consensus       158 ~~~~~~~~~~~~g~  171 (208)
                      +.++++++++.+|+
T Consensus       161 ~d~~~lidl~~~gK  174 (174)
T d1p0fa2         161 EEVSRLVDDYMKKK  174 (174)
T ss_dssp             GGHHHHHHHHHTTS
T ss_pred             HHHHHHHHHHHcCC
Confidence            35788899988875

>d1pl8a2 c.2.1.1 (A:146-316) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=1.7e-26  Score=159.86  Aligned_cols=155  Identities=18%  Similarity=0.211  Sum_probs=129.9

Q ss_pred             chhhHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHH
Q 028523            2 PGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGC-YVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAA   80 (208)
Q Consensus         2 ~~~tA~~~l~~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g~-~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~   80 (208)
                      |.++||+++ +++++++|++|+|+|+ |++|++++|+++++|+ +|+++++++++++.++ ++|++.++++.+. +..+.
T Consensus        11 pla~a~~a~-~~~~~~~gd~VlI~G~-G~iG~~~~~~a~~~G~~~Vi~~d~~~~rl~~a~-~~Ga~~~~~~~~~-~~~~~   86 (171)
T d1pl8a2          11 PLSVGIHAC-RRGGVTLGHKVLVCGA-GPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAK-EIGADLVLQISKE-SPQEI   86 (171)
T ss_dssp             HHHHHHHHH-HHHTCCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHH-HTTCSEEEECSSC-CHHHH
T ss_pred             HHHHHHHHH-HHhCCCCCCEEEEECC-CccHHHHHHHHHHcCCceEEeccCCHHHHHHHH-HhCCccccccccc-ccccc
Confidence            467899999 5589999999999986 9999999999999999 8999999999999999 9999999988876 65544


Q ss_pred             HHhH---CCCCccEEEeCCCc-hhHHHHHHhhccCCEEEEEecccccCCCCCCCccchHHHhhcceeEEEeeccccccch
Q 028523           81 LKRY---FPEGINIYFENVGG-KMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCLISKRIRMEGFLVPDYFHLY  156 (208)
Q Consensus        81 ~~~~---~~~~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  156 (208)
                      .+..   .+.++|++|||+|+ ..++.++++++++|+++.+|.+..      ...++...++.+++++.|++..      
T Consensus        87 ~~~~~~~~g~g~Dvvid~~G~~~~~~~a~~~~~~gG~iv~~G~~~~------~~~~~~~~~~~k~l~i~Gs~~~------  154 (171)
T d1pl8a2          87 ARKVEGQLGCKPEVTIECTGAEASIQAGIYATRSGGTLVLVGLGSE------MTTVPLLHAAIREVDIKGVFRY------  154 (171)
T ss_dssp             HHHHHHHHTSCCSEEEECSCCHHHHHHHHHHSCTTCEEEECSCCCS------CCCCCHHHHHHTTCEEEECCSC------
T ss_pred             cccccccCCCCceEEEeccCCchhHHHHHHHhcCCCEEEEEecCCC------CCccCHHHHHHCCcEEEEEeCC------
Confidence            4433   33489999999996 578999999999999999998652      3356778888999999998642      


Q ss_pred             HHHHHHHHHHHHCCCc
Q 028523          157 PKFLEMMIPRIKEGKI  172 (208)
Q Consensus       157 ~~~~~~~~~~~~~g~~  172 (208)
                      .+.++++++++++|++
T Consensus       155 ~~~~~~al~li~~gki  170 (171)
T d1pl8a2         155 CNTWPVAISMLASKSV  170 (171)
T ss_dssp             SSCHHHHHHHHHTTSC
T ss_pred             HhHHHHHHHHHHcCCC
Confidence            2236788999999886

>d1e3ja2 c.2.1.1 (A:143-312) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]

Probab=99.94  E-value=7.9e-26  Score=156.45  Aligned_cols=155  Identities=19%  Similarity=0.228  Sum_probs=125.7

Q ss_pred             chhhHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeEecCCCc-c---H
Q 028523            2 PGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEP-D---L   77 (208)
Q Consensus         2 ~~~tA~~~l~~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~-~---~   77 (208)
                      |.+|||+++ +.+++++|++|+|+| +|++|++++|+++..|++|+++++++++++.++ ++|++.+++++... +   .
T Consensus        11 Pla~a~~a~-~~~~~~~g~~vlV~G-~G~vG~~~~~~ak~~Ga~vi~v~~~~~r~~~a~-~~ga~~~~~~~~~~~~~~~~   87 (170)
T d1e3ja2          11 PLSVGVHAC-RRAGVQLGTTVLVIG-AGPIGLVSVLAAKAYGAFVVCTARSPRRLEVAK-NCGADVTLVVDPAKEEESSI   87 (170)
T ss_dssp             HHHHHHHHH-HHHTCCTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-HTTCSEEEECCTTTSCHHHH
T ss_pred             HHHHHHHHH-HHhCCCCCCEEEEEc-ccccchhhHhhHhhhcccccccchHHHHHHHHH-HcCCcEEEeccccccccchh
Confidence            467899999 557899999999998 599999999999999999999999999999999 99998866554321 3   3


Q ss_pred             HHHHHhHCCCCccEEEeCCCc-hhHHHHHHhhccCCEEEEEecccccCCCCCCCccchHHHhhcceeEEEeeccccccch
Q 028523           78 DAALKRYFPEGINIYFENVGG-KMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCLISKRIRMEGFLVPDYFHLY  156 (208)
Q Consensus        78 ~~~~~~~~~~~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  156 (208)
                      .+.+++..++++|++|||+|+ ..++.++++++++|+++.+|.+.+      ....+...++.+++++.|++...     
T Consensus        88 ~~~~~~~~g~g~D~vid~~g~~~~~~~a~~~~~~~G~iv~~G~~~~------~~~~~~~~~~~k~i~i~gs~~~~-----  156 (170)
T d1e3ja2          88 IERIRSAIGDLPNVTIDCSGNEKCITIGINITRTGGTLMLVGMGSQ------MVTVPLVNACAREIDIKSVFRYC-----  156 (170)
T ss_dssp             HHHHHHHSSSCCSEEEECSCCHHHHHHHHHHSCTTCEEEECSCCSS------CCCCCHHHHHTTTCEEEECCSCS-----
T ss_pred             hhhhhcccccCCceeeecCCChHHHHHHHHHHhcCCceEEEecCCC------CCCcCHHHHHHCCCEEEEEECCH-----
Confidence            344555555689999999996 578999999999999999997652      23467788899999999876432     


Q ss_pred             HHHHHHHHHHHHCCC
Q 028523          157 PKFLEMMIPRIKEGK  171 (208)
Q Consensus       157 ~~~~~~~~~~~~~g~  171 (208)
                       +.++++++++++|+
T Consensus       157 -~~~~~ai~li~~Gk  170 (170)
T d1e3ja2         157 -NDYPIALEMVASGR  170 (170)
T ss_dssp             -SCHHHHHHHHHTTS
T ss_pred             -HHHHHHHHHHHcCC
Confidence             23677888888875

>d1kola2 c.2.1.1 (A:161-355) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Formaldehyde dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=99.94  E-value=1.9e-25  Score=157.18  Aligned_cols=160  Identities=19%  Similarity=0.202  Sum_probs=130.0

Q ss_pred             hhhHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHHH
Q 028523            3 GMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGC-YVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAAL   81 (208)
Q Consensus         3 ~~tA~~~l~~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g~-~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~~   81 (208)
                      +.|||+++ +.+++++|++|+|+|+ |++|++++|+++..|+ +|++++.++++++.++ ++|++.++++.+. ++.+.+
T Consensus        11 ~~ta~~a~-~~a~v~~G~tVlV~Ga-G~vGl~a~~~ak~~ga~~Vi~~d~~~~rl~~a~-~~Ga~~~~~~~~~-~~~~~i   86 (195)
T d1kola2          11 LPTGYHGA-VTAGVGPGSTVYVAGA-GPVGLAAAASARLLGAAVVIVGDLNPARLAHAK-AQGFEIADLSLDT-PLHEQI   86 (195)
T ss_dssp             HHHHHHHH-HHTTCCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHH-HTTCEEEETTSSS-CHHHHH
T ss_pred             HHHHHHHH-HHhCCCCCCEEEEECc-CHHHHHHHHHHHhhcccceeeecccchhhHhhh-hccccEEEeCCCc-CHHHHH
Confidence            57999998 5699999999999985 9999999999999998 8999999999999999 9999999998887 999999


Q ss_pred             HhHCCC-CccEEEeCCCc----------------hhHHHHHHhhccCCEEEEEecccccCCC-------CCCCccchHHH
Q 028523           82 KRYFPE-GINIYFENVGG----------------KMLDAVLLNMRIQGRITLCGMISQYNND-------KPEGVHNLTCL  137 (208)
Q Consensus        82 ~~~~~~-~~d~v~d~~g~----------------~~~~~~~~~l~~~G~~v~~g~~~~~~~~-------~~~~~~~~~~~  137 (208)
                      .+.+++ ++|++||++|.                +.++.++++++++|+++.+|...+....       ...........
T Consensus        87 ~~~t~g~g~D~vid~vG~~~~~~~~~~~~~~~~~~~l~~~~~~~r~gG~v~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~  166 (195)
T d1kola2          87 AALLGEPEVDCAVDAVGFEARGHGHEGAKHEAPATVLNSLMQVTRVAGKIGIPGLYVTEDPGAVDAAAKIGSLSIRFGLG  166 (195)
T ss_dssp             HHHHSSSCEEEEEECCCTTCBCSSTTGGGSBCTTHHHHHHHHHEEEEEEEEECSCCCSCCTTCSSHHHHTTCCCCCHHHH
T ss_pred             HHHhCCCCcEEEEECccccccCCcccceeecCcHHHHHHHHHHHhcCCEEEEeeecCCCcccchhhhhhcCceeeeHHHH
Confidence            999888 99999999984                3799999999999999999976532110       01122344556


Q ss_pred             hhcceeEEEeeccccccchHHHHHHHHHHHHCCC
Q 028523          138 ISKRIRMEGFLVPDYFHLYPKFLEMMIPRIKEGK  171 (208)
Q Consensus       138 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~  171 (208)
                      +.+++++.+...     ..+++++++++++.+++
T Consensus       167 ~~k~~~i~~g~~-----~v~~~~~~Ll~~I~~~k  195 (195)
T d1kola2         167 WAKSHSFHTGQT-----PVMKYNRALMQAIMWDR  195 (195)
T ss_dssp             HHTTCEEEESSC-----CHHHHHHHHHHHHHTTS
T ss_pred             HhhcceeccCCC-----chHHHHHHHHHHHHcCC
Confidence            677777654222     23667888999887764

>d2jhfa2 c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Horse (Equus caballus) [TaxId: 9796]

Probab=99.94  E-value=1.8e-25  Score=155.48  Aligned_cols=162  Identities=18%  Similarity=0.184  Sum_probs=128.0

Q ss_pred             chhhHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHhcCCCeeEecCCCcc-HHH
Q 028523            2 PGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGC-YVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPD-LDA   79 (208)
Q Consensus         2 ~~~tA~~~l~~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g~-~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~-~~~   79 (208)
                      +++|||+++.+.+++++||+|+|+|+ |++|++++|+++..|+ +|+++++++++.+.++ ++|+++++++.+.++ ..+
T Consensus        12 a~~Tay~al~~~~~vk~GdtVlV~Ga-GG~G~~~~~~~~~~g~~~Vi~~~~~~~k~~~a~-~~Ga~~~i~~~~~~~~~~~   89 (176)
T d2jhfa2          12 GFSTGYGSAVKVAKVTQGSTCAVFGL-GGVGLSVIMGCKAAGAARIIGVDINKDKFAKAK-EVGATECVNPQDYKKPIQE   89 (176)
T ss_dssp             HHHHHHHHHHTTTCCCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHH-HTTCSEEECGGGCSSCHHH
T ss_pred             HHHHHHHHHHHhhCCCCCCEEEEECC-CCcHHHHHHHHHHcCCceEEeecCcHHHHHHHH-HhCCeeEEecCCchhHHHH
Confidence            57899999999999999999999997 8999999999999987 9999999999999999 999999988765423 455


Q ss_pred             HHHhHCCCCccEEEeCCCc-hhHHHHHHhhccCCEEEEEecccccCCCCCCCccchHHHhhcceeEEEeeccccccchHH
Q 028523           80 ALKRYFPEGINIYFENVGG-KMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCLISKRIRMEGFLVPDYFHLYPK  158 (208)
Q Consensus        80 ~~~~~~~~~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  158 (208)
                      ..+...++|+|++||++|. ..++.++..++++|..+.++.....    ..........+.+++++.|+...++.  .++
T Consensus        90 ~~~~~~~~G~D~vid~~G~~~~~~~a~~~~~~~~g~~~~~~~~~~----~~~~~~~~~~~~~~~~i~Gs~~G~~~--~~~  163 (176)
T d2jhfa2          90 VLTEMSNGGVDFSFEVIGRLDTMVTALSCCQEAYGVSVIVGVPPD----SQNLSMNPMLLLSGRTWKGAIFGGFK--SKD  163 (176)
T ss_dssp             HHHHHTTSCBSEEEECSCCHHHHHHHHHHBCTTTCEEEECSCCCT----TCCEEECTHHHHTTCEEEECSGGGCC--HHH
T ss_pred             HHHHHhcCCCCEEEecCCchhHHHHHHHHHhcCCcceEEecCCCC----cccccccHHHHhCCCEEEEEEEeCCC--HHH
Confidence            5555555699999999995 5778899999997555555544321    22222334566789999999876642  266


Q ss_pred             HHHHHHHHHHCCC
Q 028523          159 FLEMMIPRIKEGK  171 (208)
Q Consensus       159 ~~~~~~~~~~~g~  171 (208)
                      .++++++++.+|+
T Consensus       164 ~~~~li~~~~~GK  176 (176)
T d2jhfa2         164 SVPKLVADFMAKK  176 (176)
T ss_dssp             HHHHHHHHHHTTS
T ss_pred             HHHHHHHHHHCcC
Confidence            7889999998875

>d1cdoa2 c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Cod (Gadus callarias) [TaxId: 8053]

Probab=99.93  E-value=2.8e-25  Score=154.35  Aligned_cols=161  Identities=14%  Similarity=0.119  Sum_probs=127.2

Q ss_pred             chhhHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHH
Q 028523            2 PGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGC-YVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAA   80 (208)
Q Consensus         2 ~~~tA~~~l~~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g~-~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~   80 (208)
                      ++.|+|+++.+.+++++||+|+|+|+ |++|++++++++..|+ +|+++++++++++.++ ++|+++++|+++.++..+.
T Consensus        12 a~~Tay~a~~~~a~~k~g~~VlI~G~-Gg~g~~~~~~~~~~g~~~Vi~~~~~~~rl~~a~-~~GAd~~in~~~~~~~~~~   89 (175)
T d1cdoa2          12 GVSTGFGAAVNTAKVEPGSTCAVFGL-GAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAK-VFGATDFVNPNDHSEPISQ   89 (175)
T ss_dssp             HHHHHHHHHHTTTCCCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHH-HTTCCEEECGGGCSSCHHH
T ss_pred             HHHHHHHHHHHhhCCCCCCEEEEEec-CCccchHHHHHHHHhhchheeecchHHHHHHHH-HcCCcEEEcCCCcchhHHH
Confidence            57899999988899999999999995 9999999999999988 8999999999999999 9999999998765345555


Q ss_pred             HHhHCCC-CccEEEeCCCc-hhHHHHHHhhccCCEEEEEecccccCCCCCCCccchHHHhhcceeEEEeeccccccchHH
Q 028523           81 LKRYFPE-GINIYFENVGG-KMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCLISKRIRMEGFLVPDYFHLYPK  158 (208)
Q Consensus        81 ~~~~~~~-~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  158 (208)
                      .++.+.+ |+|++||++|+ ..+..+..++.++|.++.++...+     .....+....+.++.++.|+..+++.  .++
T Consensus        90 ~~~~~~~~G~d~vid~~G~~~~~~~a~~~~~~g~~~~~~~g~~~-----~~~~~~~~~~~~~~~~i~Gs~~G~~~--~~~  162 (175)
T d1cdoa2          90 VLSKMTNGGVDFSLECVGNVGVMRNALESCLKGWGVSVLVGWTD-----LHDVATRPIQLIAGRTWKGSMFGGFK--GKD  162 (175)
T ss_dssp             HHHHHHTSCBSEEEECSCCHHHHHHHHHTBCTTTCEEEECSCCS-----SSCEEECHHHHHTTCEEEECSGGGCC--HHH
T ss_pred             HHHhhccCCcceeeeecCCHHHHHHHHHHhhCCCcceeEEEecC-----CcccCccHHHHHCCcEEEEEEEeCCc--HHH
Confidence            5555544 99999999996 577888888888755554444332     22233445566788899998876642  267


Q ss_pred             HHHHHHHHHHCCC
Q 028523          159 FLEMMIPRIKEGK  171 (208)
Q Consensus       159 ~~~~~~~~~~~g~  171 (208)
                      .++++++++.+|+
T Consensus       163 d~~~~i~l~~~gK  175 (175)
T d1cdoa2         163 GVPKMVKAYLDKK  175 (175)
T ss_dssp             HHHHHHHHHHTTS
T ss_pred             HHHHHHHHHHcCC
Confidence            8899999999875

>d1d1ta2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=99.93  E-value=2.4e-25  Score=154.39  Aligned_cols=159  Identities=16%  Similarity=0.154  Sum_probs=125.1

Q ss_pred             chhhHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHH
Q 028523            2 PGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGC-YVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAA   80 (208)
Q Consensus         2 ~~~tA~~~l~~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g~-~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~   80 (208)
                      ++.|+|+++.+.+++++|++|+|+|+ |++|++++|+++++|+ +|++++.++++++.++ ++|+++++|+++.+...+.
T Consensus        13 a~~T~~~Av~~~~~~~~g~tVlI~G~-GgvGl~ai~~ak~~G~~~Vi~vd~~~~kl~~Ak-~~GA~~~in~~~~~~~~~~   90 (176)
T d1d1ta2          13 GFSTGYGAAVKTGKVKPGSTCVVFGL-GGVGLSVIMGCKSAGASRIIGIDLNKDKFEKAM-AVGATECISPKDSTKPISE   90 (176)
T ss_dssp             HHHHHHHHHHTTSCCCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHH-HHTCSEEECGGGCSSCHHH
T ss_pred             HHHHHHHHHHHhhCCCCCCEEEEECC-CchhHHHHHHHHHcCCceEEEecCcHHHHHHHH-hcCCcEEECccccchHHHH
Confidence            57899999988899999999999995 9999999999999997 8999999999999999 9999999998876344555


Q ss_pred             HHhHCCC-CccEEEeCCCc-hhHHHHHHhhccC-CEEEEEecccccCCCCCCCccchHHHhhcceeEEEeeccccccchH
Q 028523           81 LKRYFPE-GINIYFENVGG-KMLDAVLLNMRIQ-GRITLCGMISQYNNDKPEGVHNLTCLISKRIRMEGFLVPDYFHLYP  157 (208)
Q Consensus        81 ~~~~~~~-~~d~v~d~~g~-~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  157 (208)
                      +.+.+.+ |+|++||++|+ +.+..++..+.++ |+++.+|....    ......+.. .+.++.++.|+..++...  +
T Consensus        91 ~~~~~~g~G~d~vi~~~g~~~~~~~a~~~~~~~~G~~v~vG~~~~----~~~~~~~~~-~~~~~~~i~Gs~~G~~~~--~  163 (176)
T d1d1ta2          91 VLSEMTGNNVGYTFEVIGHLETMIDALASCHMNYGTSVVVGVPPS----AKMLTYDPM-LLFTGRTWKGCVFGGLKS--R  163 (176)
T ss_dssp             HHHHHHTSCCCEEEECSCCHHHHHHHHTTSCTTTCEEEECSCCCT----TCCEEECTH-HHHTTCEEEECSGGGCCH--H
T ss_pred             HHHHhccccceEEEEeCCchHHHHHHHHHhhcCCeEEEEEEcccc----ccccCCCHH-HHhCCCEEEEEEEeCCCc--H
Confidence            5555555 99999999996 5678888878665 99999997653    122223333 344678999988766422  5


Q ss_pred             HHHHHHHHHHHC
Q 028523          158 KFLEMMIPRIKE  169 (208)
Q Consensus       158 ~~~~~~~~~~~~  169 (208)
                      +.+.++++++.+
T Consensus       164 ~dip~li~~~~~  175 (176)
T d1d1ta2         164 DDVPKLVTEFLA  175 (176)
T ss_dssp             HHHHHHHHHHTT
T ss_pred             HHHHHHHHHHhC
Confidence            667777776543

>d1o8ca2 c.2.1.1 (A:116-192) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=99.67  E-value=5.1e-17  Score=95.24  Aligned_cols=63  Identities=27%  Similarity=0.360  Sum_probs=56.9

Q ss_pred             chhhHHHHHHH---hcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCC
Q 028523            2 PGMTAYAGFFE---VCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGF   65 (208)
Q Consensus         2 ~~~tA~~~l~~---~~~~~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~   65 (208)
                      +++|||++++.   ....+++++|||+||+|++|.+++|+++.+|++|+++++++++.++++ ++|+
T Consensus        12 aGlTA~~al~~~~~~~~~~~~~~vlI~gasGgVG~~aiQlak~~G~~Vi~~t~s~~k~~~~~-~lGA   77 (77)
T d1o8ca2          12 AGFTAMLCVMALEDAGVRPQDGEIVVTGASGGVGSTAVALLHKLGYQVVAVSGRESTHEYLK-SLGA   77 (77)
T ss_dssp             HHHHHHHHHHHHHHTTCCGGGCEEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHHH-HHTE
T ss_pred             HHHHHHHHHHHHHhhhhccCCCcEEEEeCCCcHHHHHHHHHHHcCCeEEEEECCHHHHHHHH-HCCC
Confidence            57899887754   456789999999999999999999999999999999999999999999 8884

>d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Escherichia coli [TaxId: 562]

Probab=98.85  E-value=8e-09  Score=73.95  Aligned_cols=105  Identities=22%  Similarity=0.397  Sum_probs=76.7

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCe---eEecCCCccHHHHHHhHCC--CCccEE
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDE---AFNYKEEPDLDAALKRYFP--EGINIY   92 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~---v~~~~~~~~~~~~~~~~~~--~~~d~v   92 (208)
                      +|++++|+||++++|.+.++.+...|++|+.+++++++.+.+.++++...   ..|..+.++..+.+.+...  +++|++
T Consensus         3 ~gK~alITGas~GIG~a~a~~l~~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDil   82 (243)
T d1q7ba_           3 EGKIALVTGASRGIGRAIAETLAARGAKVIGTATSENGAQAISDYLGANGKGLMLNVTDPASIESVLEKIRAEFGEVDIL   82 (243)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHTCSCSEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCCcEEEEEecCHHHhhhhhhhhhcccCCccee
Confidence            58899999999999999999999999999999999999888876776532   3455544233333443322  379999


Q ss_pred             EeCCCch--------------------------hHHHHHHhhc--cCCEEEEEecccc
Q 028523           93 FENVGGK--------------------------MLDAVLLNMR--IQGRITLCGMISQ  122 (208)
Q Consensus        93 ~d~~g~~--------------------------~~~~~~~~l~--~~G~~v~~g~~~~  122 (208)
                      +++.|..                          ..+.+++.|.  .+|+++.+++..+
T Consensus        83 VnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~II~isS~~~  140 (243)
T d1q7ba_          83 VNNAGITRDNLLMRMKDEEWNDIIETNLSSVFRLSKAVMRAMMKKRHGRIITIGSVVG  140 (243)
T ss_dssp             EECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHH
T ss_pred             hhhhhhccccccccccccccccccceeechhhhhHHHHHHHHHHcCCCEeeeecchhh
Confidence            9988632                          0345666663  3699999987654

>d1pjca1 c.2.1.4 (A:136-303) L-alanine dehydrogenase {Phormidium lapideum [TaxId: 32060]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: L-alanine dehydrogenase
species: Phormidium lapideum [TaxId: 32060]

Probab=98.81  E-value=2.2e-08  Score=66.46  Aligned_cols=103  Identities=17%  Similarity=0.215  Sum_probs=78.1

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHHHHhHCCCCccEEEeCCC
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVG   97 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~d~v~d~~g   97 (208)
                      +.-+|+|.|+ |.+|+.+++.|+.+|++|.+.+.+.+++++++..++......+.+...+.+.+++     .|+||.++=
T Consensus        31 ~pa~V~ViGa-GvaG~~A~~~A~~lGA~V~~~D~~~~~l~~l~~~~~~~~~~~~~~~~~l~~~~~~-----aDivI~aal  104 (168)
T d1pjca1          31 KPGKVVILGG-GVVGTEAAKMAVGLGAQVQIFDINVERLSYLETLFGSRVELLYSNSAEIETAVAE-----ADLLIGAVL  104 (168)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGSEEEECCHHHHHHHHHT-----CSEEEECCC
T ss_pred             CCcEEEEECC-ChHHHHHHHHHhhCCCEEEEEeCcHHHHHHHHHhhcccceeehhhhhhHHHhhcc-----CcEEEEeee
Confidence            3467999996 9999999999999999999999999999999855544322222222145555543     899999863


Q ss_pred             --ch-----hHHHHHHhhccCCEEEEEecccccCCC
Q 028523           98 --GK-----MLDAVLLNMRIQGRITLCGMISQYNND  126 (208)
Q Consensus        98 --~~-----~~~~~~~~l~~~G~~v~~g~~~~~~~~  126 (208)
                        +.     .-+++++.|++|..++.+....+.+.+
T Consensus       105 ipG~~aP~lIt~~mv~~Mk~GSVIVDvaidqGG~~E  140 (168)
T d1pjca1         105 VPGRRAPILVPASLVEQMRTGSVIVDVAVDQGGCVE  140 (168)
T ss_dssp             CTTSSCCCCBCHHHHTTSCTTCEEEETTCTTCCSBT
T ss_pred             cCCcccCeeecHHHHhhcCCCcEEEEeecCCCCccc
Confidence              21     357899999999999999988776543

>d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3beta/17beta hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=98.78  E-value=2.4e-08  Score=71.87  Aligned_cols=105  Identities=19%  Similarity=0.171  Sum_probs=76.7

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCee---EecCCCccHHHHHHhHCC--CCccEE
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEA---FNYKEEPDLDAALKRYFP--EGINIY   92 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~v---~~~~~~~~~~~~~~~~~~--~~~d~v   92 (208)
                      +|+++||+||++++|.+.++.+...|++|+.+++++++.+.+.++++....   .|..+..+..+.+.+...  +++|++
T Consensus         5 ~gK~alITGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~iDil   84 (253)
T d1hxha_           5 QGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAELGERSMFVRHDVSSEADWTLVMAAVQRRLGTLNVL   84 (253)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHCTTEEEECCCTTCHHHHHHHHHHHHHHHCSCCEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCCeEEEEeecCCHHHHHHHHHHHHHHhCCCCeE
Confidence            688999999999999999999999999999999999998888778876542   233333233333333322  369999


Q ss_pred             EeCCCch--------------------------hHHHHHHhhc-cCCEEEEEecccc
Q 028523           93 FENVGGK--------------------------MLDAVLLNMR-IQGRITLCGMISQ  122 (208)
Q Consensus        93 ~d~~g~~--------------------------~~~~~~~~l~-~~G~~v~~g~~~~  122 (208)
                      +++.|..                          ....+++.|+ .+|+++.+++...
T Consensus        85 VnnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~G~Iv~isS~~~  141 (253)
T d1hxha_          85 VNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKETGGSIINMASVSS  141 (253)
T ss_dssp             EECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTCEEEEEECCGGG
T ss_pred             EecccccCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhcCCceecccchhh
Confidence            9998731                          0345666675 4799999987664

>d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Retinal dehydrogenase/reductase 3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.77  E-value=3.4e-08  Score=70.84  Aligned_cols=105  Identities=15%  Similarity=0.147  Sum_probs=76.1

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCe--eEecCCCccHHHHHHhHCC--CCccEEE
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDE--AFNYKEEPDLDAALKRYFP--EGINIYF   93 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~--v~~~~~~~~~~~~~~~~~~--~~~d~v~   93 (208)
                      +|+++||+||++++|.+.++.+...|++|+++++++++.+.+.++++...  ..|..+.++..+.+.+...  +++|+++
T Consensus         5 ~GK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~~~~~g~iDilV   84 (250)
T d1ydea1           5 AGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQELPGAVFILCDVTQEDDVKTLVSETIRRFGRLDCVV   84 (250)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCTTEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhcCCCeEEEccCCCHHHHHHHHHHHHHhcCCCCEEE
Confidence            68999999999999999999999999999999999999888876665432  3454444234433333322  3699999


Q ss_pred             eCCC-ch---h-----------------------HHHHHHhhcc-CCEEEEEecccc
Q 028523           94 ENVG-GK---M-----------------------LDAVLLNMRI-QGRITLCGMISQ  122 (208)
Q Consensus        94 d~~g-~~---~-----------------------~~~~~~~l~~-~G~~v~~g~~~~  122 (208)
                      ++.| ..   .                       .+.+++.|+. +|+++.+++..+
T Consensus        85 nnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~G~Ii~isS~~~  141 (250)
T d1ydea1          85 NNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKSQGNVINISSLVG  141 (250)
T ss_dssp             ECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCHHH
T ss_pred             ecccccccccccccccHHHHHHHHHHhhhhHHHHHHHhhHHHHhCCCCCcccccccc
Confidence            9887 22   0                       2445666655 689999987654

>d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase
species: Streptomyces hydrogenans [TaxId: 1905]

Probab=98.76  E-value=2.9e-08  Score=71.37  Aligned_cols=105  Identities=15%  Similarity=0.150  Sum_probs=75.6

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCe---eEecCCCccHHHHHHhHCC--CCccEE
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDE---AFNYKEEPDLDAALKRYFP--EGINIY   92 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~---v~~~~~~~~~~~~~~~~~~--~~~d~v   92 (208)
                      +|+++||+||++++|.+.++.+...|++|+.+++++++.+.+.++++...   ..|..+.++..+.+.+...  +++|++
T Consensus         4 ~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDil   83 (254)
T d1hdca_           4 SGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATARELGDAARYQHLDVTIEEDWQRVVAYAREEFGSVDGL   83 (254)
T ss_dssp             CCSEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCceEEEEcccCCHHHHHHHHHHHHHHcCCccEE
Confidence            68999999999999999999999999999999999998888776776532   3444444233333333322  369999


Q ss_pred             EeCCCc-hh-------------------------HHHHHHhhcc--CCEEEEEecccc
Q 028523           93 FENVGG-KM-------------------------LDAVLLNMRI--QGRITLCGMISQ  122 (208)
Q Consensus        93 ~d~~g~-~~-------------------------~~~~~~~l~~--~G~~v~~g~~~~  122 (208)
                      +++.|. ..                         .+.+++.|..  +|+++.+++...
T Consensus        84 VnnAg~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~~~~G~II~isS~~~  141 (254)
T d1hdca_          84 VNNAGISTGMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDAGGGSIVNISSAAG  141 (254)
T ss_dssp             EECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGG
T ss_pred             EecCccccccccccccccccchhhhHHhhHHHHHHHHHHHHHhhcCCCeecccccchh
Confidence            998872 20                         2345555443  699999987665

>d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein TTHA0369
species: Thermus thermophilus [TaxId: 274]

Probab=98.72  E-value=4.2e-08  Score=70.31  Aligned_cols=105  Identities=13%  Similarity=0.128  Sum_probs=76.4

Q ss_pred             CCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCe-eEecCCCccHHHHHHhHCC--CCccEEE
Q 028523           17 KQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDE-AFNYKEEPDLDAALKRYFP--EGINIYF   93 (208)
Q Consensus        17 ~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~-v~~~~~~~~~~~~~~~~~~--~~~d~v~   93 (208)
                      -+|+++||+||++++|.+.++.+...|++|++++++++..+.++ +++... ..|..+.++..+.+.+...  +++|+++
T Consensus         3 l~GK~alITGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~-~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iDiLV   81 (248)
T d2d1ya1           3 FAGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEGKEVAE-AIGGAFFQVDLEDERERVRFVEEAAYALGRVDVLV   81 (248)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTHHHHHH-HHTCEEEECCTTCHHHHHHHHHHHHHHHSCCCEEE
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-HcCCeEEEEeCCCHHHHHHHHHHHHHhcCCCCeEE
Confidence            46899999999999999999999999999999999988877776 777643 3455544233333433322  3699999


Q ss_pred             eCCCc-h-------------------------hHHHHHHhhcc--CCEEEEEecccc
Q 028523           94 ENVGG-K-------------------------MLDAVLLNMRI--QGRITLCGMISQ  122 (208)
Q Consensus        94 d~~g~-~-------------------------~~~~~~~~l~~--~G~~v~~g~~~~  122 (208)
                      ++.|. .                         ..+.+++.|.+  +|+++.++....
T Consensus        82 nnAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~Ii~isS~~~  138 (248)
T d2d1ya1          82 NNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVGGGAIVNVASVQG  138 (248)
T ss_dssp             ECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCGGG
T ss_pred             EeCcCCCCCChhhCCHHHHHHHHHhhhhhHhhhhhhhcccccccccccccccccccc
Confidence            98872 1                         03456666754  689999987664

>d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus [TaxId: 274]

Probab=98.71  E-value=2.6e-08  Score=71.14  Aligned_cols=80  Identities=9%  Similarity=0.172  Sum_probs=62.2

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCe-eEecCCCccHHHHHHhHCC--CCccEEEe
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDE-AFNYKEEPDLDAALKRYFP--EGINIYFE   94 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~-v~~~~~~~~~~~~~~~~~~--~~~d~v~d   94 (208)
                      +|+++||+||++++|.+.++.+...|++|+.+++++++.+.+.++++... ..|..+.++..+.+.+...  +++|++++
T Consensus         4 ~gK~~lITGas~GIG~aia~~l~~~G~~V~~~~r~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDilVn   83 (242)
T d1ulsa_           4 KDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAVGAHPVVMDVADPASVERGFAEALAHLGRLDGVVH   83 (242)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTTCEEEECCTTCHHHHHHHHHHHHHHHSSCCEEEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcCCeEEEEecCCHHHHHHHHHHHHHhcCCceEEEE
Confidence            58999999999999999999999999999999999999888876777643 3555554334443433322  36999999


Q ss_pred             CCC
Q 028523           95 NVG   97 (208)
Q Consensus        95 ~~g   97 (208)
                      +.|
T Consensus        84 nAG   86 (242)
T d1ulsa_          84 YAG   86 (242)
T ss_dssp             CCC
T ss_pred             CCc
Confidence            887

>d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Xylitol dehydrogenase
species: Gluconobacter oxydans [TaxId: 442]

Probab=98.68  E-value=6.2e-08  Score=69.92  Aligned_cols=105  Identities=18%  Similarity=0.246  Sum_probs=73.4

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhc---CCCe---eEecCCCccHHHHHHhHCC--CCc
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKF---GFDE---AFNYKEEPDLDAALKRYFP--EGI   89 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~---g~~~---v~~~~~~~~~~~~~~~~~~--~~~   89 (208)
                      +|+++||+||++++|++.++.+...|++|+++++++++.+.+.+++   |...   ..|..+.++..+.+.+...  +++
T Consensus         4 ~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i   83 (260)
T d1zema1           4 NGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGVEARSYVCDVTSEEAVIGTVDSVVRDFGKI   83 (260)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence            6899999999999999999999999999999999998877665443   4332   3444443233443433322  369


Q ss_pred             cEEEeCCCc-hh--------------------------HHHHHHhh--ccCCEEEEEecccc
Q 028523           90 NIYFENVGG-KM--------------------------LDAVLLNM--RIQGRITLCGMISQ  122 (208)
Q Consensus        90 d~v~d~~g~-~~--------------------------~~~~~~~l--~~~G~~v~~g~~~~  122 (208)
                      |+++++.|. ..                          ...+++.|  +.+|+++.+++..+
T Consensus        84 DilVnnaG~~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~m~~~~~G~II~isS~~~  145 (260)
T d1zema1          84 DFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQNYGRIVNTASMAG  145 (260)
T ss_dssp             CEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHH
T ss_pred             CeehhhhccccccCccccccHHHHHhhccccccccccchhhHHhhhhhhcCCCCCeeechhh
Confidence            999998772 10                          23455555  45799999987654

>d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.67  E-value=6.8e-08  Score=69.04  Aligned_cols=103  Identities=17%  Similarity=0.180  Sum_probs=73.6

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCe--eEecCCCccHHHHHHhHCCCCccEEEeC
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDE--AFNYKEEPDLDAALKRYFPEGINIYFEN   95 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~--v~~~~~~~~~~~~~~~~~~~~~d~v~d~   95 (208)
                      +|+++||+||++++|.+.++.+...|++|+.+++++++.+.+.++++...  .+|..+.+...+.+.+ . +++|+++++
T Consensus         6 ~GK~~lITGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~-~-g~iDilVnn   83 (244)
T d1pr9a_           6 AGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRECPGIEPVCVDLGDWEATERALGS-V-GPVDLLVNN   83 (244)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHSTTCEEEECCTTCHHHHHHHHTT-C-CCCCEEEEC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHhcCCCeEEEEeCCCHHHHHHHHHH-h-CCceEEEec
Confidence            78999999999999999999999999999999999999888776776533  3455543122222222 1 379999998


Q ss_pred             CCchh--------------------------HHHHHH-hhc--cCCEEEEEecccc
Q 028523           96 VGGKM--------------------------LDAVLL-NMR--IQGRITLCGMISQ  122 (208)
Q Consensus        96 ~g~~~--------------------------~~~~~~-~l~--~~G~~v~~g~~~~  122 (208)
                      .|...                          .+.+++ .++  .+|+++.++....
T Consensus        84 Ag~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~  139 (244)
T d1pr9a_          84 AAVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVSSQCS  139 (244)
T ss_dssp             CCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGG
T ss_pred             cccccccchhhhhHHHHHHHHHHhhhhhhHHHHHhhhHHHHhCCcceEeecccccc
Confidence            87320                          233454 333  3689999987654

>d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Gluconate 5-dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=98.67  E-value=1.4e-07  Score=67.60  Aligned_cols=104  Identities=15%  Similarity=0.227  Sum_probs=73.2

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH----hcCCCe---eEecCCCccHHHHHHhHCC--CC
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKN----KFGFDE---AFNYKEEPDLDAALKRYFP--EG   88 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~----~~g~~~---v~~~~~~~~~~~~~~~~~~--~~   88 (208)
                      +|+++||+||++++|.+.++.+...|++|+++++++++.+.+.+    ++|...   ..|..+.++..+.+.+...  ++
T Consensus         4 ~gK~~lITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   83 (251)
T d1vl8a_           4 RGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSNYEEVKKLLEAVKEKFGK   83 (251)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHhCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            58899999999999999999999999999999999887654432    445532   2355544233333433322  36


Q ss_pred             ccEEEeCCCc-h-------------------------hHHHHHHhhcc--CCEEEEEeccc
Q 028523           89 INIYFENVGG-K-------------------------MLDAVLLNMRI--QGRITLCGMIS  121 (208)
Q Consensus        89 ~d~v~d~~g~-~-------------------------~~~~~~~~l~~--~G~~v~~g~~~  121 (208)
                      +|+++++.|. .                         ..+.+++.|..  +|+++.++...
T Consensus        84 iDiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~i~S~~  144 (251)
T d1vl8a_          84 LDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESDNPSIINIGSLT  144 (251)
T ss_dssp             CCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCSSCEEEEECCGG
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHhhhhhhhhhhhhhhhcccccccccccccccch
Confidence            9999999873 2                         03556777744  68999998754

>d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus, TTHB020 [TaxId: 274]

Probab=98.65  E-value=1.7e-07  Score=66.73  Aligned_cols=104  Identities=11%  Similarity=0.128  Sum_probs=75.8

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCe---eEecCCCccHHHHHHhHCC--CCccEE
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDE---AFNYKEEPDLDAALKRYFP--EGINIY   92 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~---v~~~~~~~~~~~~~~~~~~--~~~d~v   92 (208)
                      +|+++||+||++++|.+.++-+...|++|+.+.++.++.+.+.++++...   ..|.++.++..+.+.+...  +++|++
T Consensus         4 ~gK~alItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~i~~~~~~i~~~~g~iDiL   83 (241)
T d2a4ka1           4 SGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAALEAEAIAVVADVSDPKAVEAVFAEALEEFGRLHGV   83 (241)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTCCSSEEEEECCTTSHHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcCCceEEEEecCCCHHHHHHHHHHHHHHhCCccEe
Confidence            68999999999999999999999999999999999999888877888643   2344444234443444332  369999


Q ss_pred             EeCCCch-h-------------------------HHHHHHhhccCCEEEEEeccc
Q 028523           93 FENVGGK-M-------------------------LDAVLLNMRIQGRITLCGMIS  121 (208)
Q Consensus        93 ~d~~g~~-~-------------------------~~~~~~~l~~~G~~v~~g~~~  121 (208)
                      +++.+.. .                         ....++.+..++.++.++...
T Consensus        84 innAg~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~k~~~~~~~~~~~i~~~ss~a  138 (241)
T d2a4ka1          84 AHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVLEEGGSLVLTGSVA  138 (241)
T ss_dssp             EEGGGGTTTTC----CHHHHHHHHHHHHHHHHHHHHHHHHHCCTTCEEEEECCCT
T ss_pred             ccccccccccchhhhhccccccccccccccccccccccccccccccceeeccccc
Confidence            9987632 0                         244566777778777665543

>d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 17-beta-hydroxysteroid dehydrogenase type XI
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.65  E-value=6.4e-08  Score=69.11  Aligned_cols=105  Identities=19%  Similarity=0.209  Sum_probs=73.6

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHh---cCCCe---eEecCCCccHHHHHHhHC--CCCc
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNK---FGFDE---AFNYKEEPDLDAALKRYF--PEGI   89 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~---~g~~~---v~~~~~~~~~~~~~~~~~--~~~~   89 (208)
                      .|+.+||+||++|+|...+..+...|++|+.+++++++++.+.++   .|...   ..|.++.++..+.++...  -+++
T Consensus         6 ~Gkv~lITGas~GIG~~ia~~la~~G~~V~l~~r~~~~l~~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~g~i   85 (244)
T d1yb1a_           6 TGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGAKVHTFVVDCSNREDIYSSAKKVKAEIGDV   85 (244)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTCCC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHcCCC
Confidence            589999999999999999988889999999999999987766543   34332   345555423344444332  2369


Q ss_pred             cEEEeCCCchh--------------------------HHHHHHhhcc--CCEEEEEecccc
Q 028523           90 NIYFENVGGKM--------------------------LDAVLLNMRI--QGRITLCGMISQ  122 (208)
Q Consensus        90 d~v~d~~g~~~--------------------------~~~~~~~l~~--~G~~v~~g~~~~  122 (208)
                      |+++++.|...                          ...+++.|..  .|+++.+++..+
T Consensus        86 dilinnag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~G~Iv~isS~~~  146 (244)
T d1yb1a_          86 SILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNNHGHIVTVASAAG  146 (244)
T ss_dssp             SEEEECCCCCCCCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCC-
T ss_pred             ceeEeeccccccccccccchhHHHhhcceeeeccHHHHHHHhhhHHhcCCceEEEeecchh
Confidence            99999987321                          2445666655  578998887653

>d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.64  E-value=9.5e-08  Score=68.17  Aligned_cols=78  Identities=15%  Similarity=0.155  Sum_probs=58.7

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCe--eEecCCCccHHHHHHhHCCCCccEEEeC
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDE--AFNYKEEPDLDAALKRYFPEGINIYFEN   95 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~--v~~~~~~~~~~~~~~~~~~~~~d~v~d~   95 (208)
                      +|+++||+||++++|.+.++.+...|++|+.+++++++.+.+.++++...  ..|..+.+...+.+.++  +++|+++++
T Consensus         4 ~GK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~--g~iDilVnn   81 (242)
T d1cyda_           4 SGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKECPGIEPVCVDLGDWDATEKALGGI--GPVDLLVNN   81 (242)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHSTTCEEEECCTTCHHHHHHHHTTC--CCCSEEEEC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhcCCCeEEEEeCCCHHHHHHHHHHc--CCCeEEEEC
Confidence            58999999999999999999999999999999999998887776765433  34444431222222221  379999998


Q ss_pred             CC
Q 028523           96 VG   97 (208)
Q Consensus        96 ~g   97 (208)
                      .|
T Consensus        82 Ag   83 (242)
T d1cyda_          82 AA   83 (242)
T ss_dssp             CC
T ss_pred             Cc
Confidence            87

>d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative oxidoreductase Rv2002
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=98.64  E-value=5e-08  Score=69.72  Aligned_cols=106  Identities=17%  Similarity=0.201  Sum_probs=76.7

Q ss_pred             CCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCe---eEecCCCccHHHHHHhHCC--CCccE
Q 028523           17 KQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDE---AFNYKEEPDLDAALKRYFP--EGINI   91 (208)
Q Consensus        17 ~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~---v~~~~~~~~~~~~~~~~~~--~~~d~   91 (208)
                      -+|+++||+||++++|.+.++.+...|++|+.+++++++.+.+.++++...   ..|..+.++..+.+++...  +++|+
T Consensus         4 L~gK~alITGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~idi   83 (244)
T d1nffa_           4 LTGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELADAARYVHLDVTQPAQWKAAVDTAVTAFGGLHV   83 (244)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhCcceEEEeecCCHHHHHHHHHHHHHHhCCCeE
Confidence            368999999999999999999999999999999999999888876776432   2455544234444444332  36999


Q ss_pred             EEeCCCc-hh-------------------------HHHHHHhhcc--CCEEEEEecccc
Q 028523           92 YFENVGG-KM-------------------------LDAVLLNMRI--QGRITLCGMISQ  122 (208)
Q Consensus        92 v~d~~g~-~~-------------------------~~~~~~~l~~--~G~~v~~g~~~~  122 (208)
                      ++++.|. ..                         .+.+++.|..  +|+++.++...+
T Consensus        84 linnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~isS~~~  142 (244)
T d1nffa_          84 LVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAGRGSIINISSIEG  142 (244)
T ss_dssp             EEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGG
T ss_pred             EEECCcccCCCchhhCCHHHHhHHhhcccchhhHHHHHHHhHHHhcCcceEEecccccc
Confidence            9999873 20                         2335555543  689999988765

>d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sorbitol dehydrogenase
species: Rhodobacter sphaeroides [TaxId: 1063]

Probab=98.63  E-value=4.5e-08  Score=70.51  Aligned_cols=105  Identities=13%  Similarity=0.213  Sum_probs=76.0

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCe---eEecCCCccHHHHHHhHCC--CCccEE
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDE---AFNYKEEPDLDAALKRYFP--EGINIY   92 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~---v~~~~~~~~~~~~~~~~~~--~~~d~v   92 (208)
                      +|+++||+||++++|++.++.+...|++|+++++++++.+.+.+++|...   ..|..+.++..+.+.+...  +++|++
T Consensus         4 ~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~~~g~iDil   83 (256)
T d1k2wa_           4 DGKTALITGSARGIGRAFAEAYVREGARVAIADINLEAARATAAEIGPAACAIALDVTDQASIDRCVAELLDRWGSIDIL   83 (256)
T ss_dssp             TTEEEEEETCSSHHHHHHHHHHHHTTEEEEEEESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCceEEEEeeCCCHHHHHHHHHHHHHHhCCccEE
Confidence            58899999999999999999999999999999999999888777888643   3455554234443433322  379999


Q ss_pred             EeCCCc-hh-------------------------HHHHHHh-hc--cCCEEEEEecccc
Q 028523           93 FENVGG-KM-------------------------LDAVLLN-MR--IQGRITLCGMISQ  122 (208)
Q Consensus        93 ~d~~g~-~~-------------------------~~~~~~~-l~--~~G~~v~~g~~~~  122 (208)
                      +++.|. ..                         .+.++.. ++  .+|+++.++...+
T Consensus        84 VnnAg~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~~~~~~~~g~Iv~isS~~~  142 (256)
T d1k2wa_          84 VNNAALFDLAPIVEITRESYDRLFAINVSGTLFMMQAVARAMIAGGRGGKIINMASQAG  142 (256)
T ss_dssp             EECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGG
T ss_pred             EeecccccccccccCCHHHHHhhhceeeeccccchhhccchhHHhccCCccccccchhh
Confidence            999873 10                         1333443 43  3689999987665

>d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=98.60  E-value=1.5e-07  Score=67.80  Aligned_cols=105  Identities=15%  Similarity=0.268  Sum_probs=70.4

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhc---CCC---eeEecCCCccHHHHHHh---HCCCC
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKF---GFD---EAFNYKEEPDLDAALKR---YFPEG   88 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~---g~~---~v~~~~~~~~~~~~~~~---~~~~~   88 (208)
                      +|+++||+||++++|.+.++.+...|++|+.+++++++.+.+.+++   +..   ...|..+.++..+.+.+   ..++.
T Consensus         7 kgK~alVTGas~GIG~aiA~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~g~   86 (259)
T d1xq1a_           7 KAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQVTGSVCDASLRPEREKLMQTVSSMFGGK   86 (259)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHTTC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHHHhCCC
Confidence            6899999999999999999999999999999999998877665443   222   13455543233333333   23346


Q ss_pred             ccEEEeCCCc-hh-------------------------HHHHHHhhc--cCCEEEEEecccc
Q 028523           89 INIYFENVGG-KM-------------------------LDAVLLNMR--IQGRITLCGMISQ  122 (208)
Q Consensus        89 ~d~v~d~~g~-~~-------------------------~~~~~~~l~--~~G~~v~~g~~~~  122 (208)
                      +|+++++.|. ..                         .+.+++.|.  .+|+++.++...+
T Consensus        87 idilvnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Iv~isS~~~  148 (259)
T d1xq1a_          87 LDILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKASGCGNIIFMSSIAG  148 (259)
T ss_dssp             CSEEEEECCC------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCEEEEEC----
T ss_pred             cccccccccccCCCchhhCCHHHHHHHHHHHhhhheeeehhhhhcccccccccccccccccc
Confidence            9999999873 20                         244555554  3689999987654

>d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative dehydrogenase ARPG836 (MGC4172)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.59  E-value=1.5e-07  Score=67.70  Aligned_cols=81  Identities=23%  Similarity=0.385  Sum_probs=58.4

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhc---CCC-e----eEecCCCccHHHHHHhHCC--C
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKF---GFD-E----AFNYKEEPDLDAALKRYFP--E   87 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~---g~~-~----v~~~~~~~~~~~~~~~~~~--~   87 (208)
                      +|+++||+||++++|.+.++.+...|++|+.+++++++.+.+.+++   +.. .    ..|..++++..+.+.+...  +
T Consensus         9 k~Kv~lITGas~GIG~aiA~~la~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~v~~~~~~~g   88 (257)
T d1xg5a_           9 RDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRSQHS   88 (257)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHHHHHC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEEEccCCCHHHHHHHHHHHHHhcC
Confidence            5889999999999999999999999999999999998877654333   321 2    2345554234443333322  3


Q ss_pred             CccEEEeCCCc
Q 028523           88 GINIYFENVGG   98 (208)
Q Consensus        88 ~~d~v~d~~g~   98 (208)
                      ++|+++++.|.
T Consensus        89 ~iD~lVnnAg~   99 (257)
T d1xg5a_          89 GVDICINNAGL   99 (257)
T ss_dssp             CCSEEEECCCC
T ss_pred             CCCEEEecccc
Confidence            69999999873

>d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase
species: Pseudomonas sp., lb400 [TaxId: 306]

Probab=98.59  E-value=6.7e-08  Score=70.36  Aligned_cols=80  Identities=19%  Similarity=0.235  Sum_probs=60.5

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCe---eEecCCCccHHHHHHhHCC--CCccEE
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDE---AFNYKEEPDLDAALKRYFP--EGINIY   92 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~---v~~~~~~~~~~~~~~~~~~--~~~d~v   92 (208)
                      +|+++||+||++++|.+.++.+...|++|+++++++++.+.+.+++|...   ..|..+.++..+.+.+...  +++|++
T Consensus         4 ~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~idil   83 (276)
T d1bdba_           4 KGEAVLITGGASGLGRALVDRFVAEGAKVAVLDKSAERLAELETDHGDNVLGIVGDVRSLEDQKQAASRCVARFGKIDTL   83 (276)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcCCCeeEEecccccHHHHHHHHHHHHHHhCCcccc
Confidence            58999999999999999999999999999999999999887776777532   3344443233333333322  269999


Q ss_pred             EeCCC
Q 028523           93 FENVG   97 (208)
Q Consensus        93 ~d~~g   97 (208)
                      +++.|
T Consensus        84 vnnAG   88 (276)
T d1bdba_          84 IPNAG   88 (276)
T ss_dssp             ECCCC
T ss_pred             ccccc
Confidence            99876

>d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.58  E-value=4.6e-08  Score=71.18  Aligned_cols=104  Identities=17%  Similarity=0.246  Sum_probs=69.4

Q ss_pred             CCCEE-EEecCCchHHHHHHH-HHHHcCCEEEEEeCCHHHHHHHHHhc---CCC-e--eEecCCCccHHHHHHhHCC--C
Q 028523           18 QGEYV-FVSAASGAVGQLVGQ-FAKLVGCYVVGSAGSKDKVDLLKNKF---GFD-E--AFNYKEEPDLDAALKRYFP--E   87 (208)
Q Consensus        18 ~g~~v-li~ga~g~vG~~a~q-la~~~g~~v~~~~~s~~~~~~~~~~~---g~~-~--v~~~~~~~~~~~~~~~~~~--~   87 (208)
                      +|.+| ||+||++|+|+++++ +++..|++|+.+++++++.+.+.+++   |.. .  ..|..+.++..+.+.+...  +
T Consensus         1 ~g~rVAlVTGas~GIG~a~A~~la~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dvs~~~sv~~~~~~~~~~~g   80 (275)
T d1wmaa1           1 SGIHVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDDLQSIRALRDFLRKEYG   80 (275)
T ss_dssp             CCCCEEEESSCSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCeEEEECCCCCHHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEEecCCHHHHHHHHHHHHHhcC
Confidence            36667 899999999998875 55566899999999999877665444   332 2  3455543223322222222  3


Q ss_pred             CccEEEeCCCc-h-------------------------hHHHHHHhhccCCEEEEEeccc
Q 028523           88 GINIYFENVGG-K-------------------------MLDAVLLNMRIQGRITLCGMIS  121 (208)
Q Consensus        88 ~~d~v~d~~g~-~-------------------------~~~~~~~~l~~~G~~v~~g~~~  121 (208)
                      ++|+++++.|- .                         ..+.+++.|++.|+++.++...
T Consensus        81 ~iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~g~ivnisS~~  140 (275)
T d1wmaa1          81 GLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQGRVVNVSSIM  140 (275)
T ss_dssp             SEEEEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCHH
T ss_pred             CcEEEEEcCCcCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccccc
Confidence            69999999872 1                         1244566778899999987643

>d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=98.58  E-value=1.2e-07  Score=68.09  Aligned_cols=105  Identities=15%  Similarity=0.292  Sum_probs=72.2

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHh---cCCCe---eEecCCCccHHHHHHhHC--CCCc
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNK---FGFDE---AFNYKEEPDLDAALKRYF--PEGI   89 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~---~g~~~---v~~~~~~~~~~~~~~~~~--~~~~   89 (208)
                      +|+.+||+||++++|.+.++.+...|++|+++++++++.+.+.++   .|...   ..|..+.++..+.+.+..  -+++
T Consensus         9 enKvalITGas~GIG~a~a~~la~~Ga~V~~~~r~~~~l~~~~~~l~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~g~i   88 (251)
T d2c07a1           9 ENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGYESSGYAGDVSKKEEISEVINKILTEHKNV   88 (251)
T ss_dssp             SSCEEEEESTTSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHCSCC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHhcCCc
Confidence            478899999999999999998888999999999999887765543   34322   345554423333333332  2379


Q ss_pred             cEEEeCCCchh--------------------------HHHHHHhh--ccCCEEEEEecccc
Q 028523           90 NIYFENVGGKM--------------------------LDAVLLNM--RIQGRITLCGMISQ  122 (208)
Q Consensus        90 d~v~d~~g~~~--------------------------~~~~~~~l--~~~G~~v~~g~~~~  122 (208)
                      |+++++.|...                          ...+++.|  +.+|++|.+++..+
T Consensus        89 Dilvnnag~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~IVnisS~~~  149 (251)
T d2c07a1          89 DILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINNRYGRIINISSIVG  149 (251)
T ss_dssp             CEEEECCCCCCCCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTCEEEEEECCTHH
T ss_pred             eeeeeccccccccccccccHHHHhhhheeeehhhhhhhhhcCcccccCCCeEEEEECCHHh
Confidence            99999887320                          24455555  33699999987554

>d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Rhizome secoisolariciresinol dehydrogenase
species: Mayapple (Podophyllum peltatum) [TaxId: 35933]

Probab=98.58  E-value=1e-07  Score=69.12  Aligned_cols=105  Identities=19%  Similarity=0.272  Sum_probs=74.6

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCC---e--eEecCCCccHHHHHHhHCC--CCcc
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFD---E--AFNYKEEPDLDAALKRYFP--EGIN   90 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~---~--v~~~~~~~~~~~~~~~~~~--~~~d   90 (208)
                      +|+.+||+||++++|.+.++.+...|++|+.+++++++.+.+.++++..   .  ..|..+.+++.+.+.+...  +++|
T Consensus         5 ~gKvalITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD   84 (268)
T d2bgka1           5 QDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGSPDVISFVHCDVTKDEDVRNLVDTTIAKHGKLD   84 (268)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhcCCCceEEEEccCCCHHHHHHHHHHHHHHcCCcc
Confidence            6899999999999999999999999999999999999988877676542   1  2344443234333333322  3799


Q ss_pred             EEEeCCCc-h-----h----------------------HHHHHHhhcc--CCEEEEEecccc
Q 028523           91 IYFENVGG-K-----M----------------------LDAVLLNMRI--QGRITLCGMISQ  122 (208)
Q Consensus        91 ~v~d~~g~-~-----~----------------------~~~~~~~l~~--~G~~v~~g~~~~  122 (208)
                      +++++.|. .     .                      .+.+++.|.+  +|+++.++....
T Consensus        85 ~lVnnAG~~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~ii~iss~~~  146 (268)
T d2bgka1          85 IMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPAKKGSIVFTASISS  146 (268)
T ss_dssp             EEEECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGGGTCEEEEEECCGGG
T ss_pred             eeccccccccCCCcccccCcHHHHHHHHHHhhcchhhhhhhhcchHhhcCCCCccccccccc
Confidence            99998872 1     0                      2446666643  688888876554

>d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylene-tetrahydromethanopterin dehydrogenase
species: Methylobacterium extorquens [TaxId: 408]

Probab=98.58  E-value=1.9e-07  Score=64.10  Aligned_cols=77  Identities=19%  Similarity=0.187  Sum_probs=58.2

Q ss_pred             CCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcC----C-CeeEecCCCccHHHHHHhHCCCCcc
Q 028523           16 PKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFG----F-DEAFNYKEEPDLDAALKRYFPEGIN   90 (208)
Q Consensus        16 ~~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g----~-~~v~~~~~~~~~~~~~~~~~~~~~d   90 (208)
                      --+|++++|+||+|++|..+++.+...|++|+.++|++++.+.+.+++.    . ....|..+.    +.+.+..+ ++|
T Consensus        20 ~l~gK~vlItGasgGIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~----~~~~~~~~-~iD   94 (191)
T d1luaa1          20 SVKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKRFKVNVTAAETADD----ASRAEAVK-GAH   94 (191)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHHTCCCEEEECCSH----HHHHHHTT-TCS
T ss_pred             CCCCCEEEEECCCHHHHHHHHHHHHhhccchhhcccchHHHHHHHHHHHhccchhhhhhhcccH----HHHHHHhc-CcC
Confidence            4489999999999999999999999999999999999998777664432    2 124454432    23333333 599


Q ss_pred             EEEeCCC
Q 028523           91 IYFENVG   97 (208)
Q Consensus        91 ~v~d~~g   97 (208)
                      ++|++.|
T Consensus        95 ilin~Ag  101 (191)
T d1luaa1          95 FVFTAGA  101 (191)
T ss_dssp             EEEECCC
T ss_pred             eeeecCc
Confidence            9999987

>d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), II [TaxId: 4076]

Probab=98.56  E-value=3.8e-07  Score=65.64  Aligned_cols=105  Identities=14%  Similarity=0.210  Sum_probs=73.3

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhc---CCCe---eEecCCCccHHHHHHh---HCCCC
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKF---GFDE---AFNYKEEPDLDAALKR---YFPEG   88 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~---g~~~---v~~~~~~~~~~~~~~~---~~~~~   88 (208)
                      +|+++||+||++++|.+.++.+...|++|+++++++++.+.+.+++   |...   ..|..+.++..+.+.+   ..+++
T Consensus         7 ~GK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~~   86 (259)
T d2ae2a_           7 EGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSSRSERQELMNTVANHFHGK   86 (259)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHTTTC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEeeCCCHHHHHHHHHHHHHHhCCC
Confidence            6899999999999999999999999999999999998877665443   3322   2344443233333333   23336


Q ss_pred             ccEEEeCCCc-hh-------------------------HHHHHHhhc--cCCEEEEEecccc
Q 028523           89 INIYFENVGG-KM-------------------------LDAVLLNMR--IQGRITLCGMISQ  122 (208)
Q Consensus        89 ~d~v~d~~g~-~~-------------------------~~~~~~~l~--~~G~~v~~g~~~~  122 (208)
                      +|+++++.|. ..                         ...+++.|.  .+|+++.+++..+
T Consensus        87 idilvnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~isS~~~  148 (259)
T d2ae2a_          87 LNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASERGNVVFISSVSG  148 (259)
T ss_dssp             CCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTSSEEEEEECCGGG
T ss_pred             ceEEEECCceeccCccccCCHHHHHHHHhcccceeEEEEeeccchhhhhccccccccccccc
Confidence            9999999873 20                         234555553  3699999987665

>d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: R-specific alcohol dehydrogenase
species: Lactobacillus brevis [TaxId: 1580]

Probab=98.52  E-value=1.5e-07  Score=67.50  Aligned_cols=105  Identities=11%  Similarity=0.084  Sum_probs=73.6

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCC---e--eEecCCCccHHHHHHhHCC--CCcc
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFD---E--AFNYKEEPDLDAALKRYFP--EGIN   90 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~---~--v~~~~~~~~~~~~~~~~~~--~~~d   90 (208)
                      +|+.+||+||++++|.+.++.+...|++|+++++++++.+.+.++++..   .  ..|..+.++..+.+.+...  +++|
T Consensus         5 ~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iD   84 (251)
T d1zk4a1           5 DGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGTPDQIQFFQHDSSDEDGWTKLFDATEKAFGPVS   84 (251)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHSSCC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCCCcEEEEEccCCCHHHHHHHHHHHHHHhCCce
Confidence            5899999999999999999999999999999999999888777666532   1  2344443233333333222  3799


Q ss_pred             EEEeCCCc-hh-------------------------HHHHHHhhcc---CCEEEEEecccc
Q 028523           91 IYFENVGG-KM-------------------------LDAVLLNMRI---QGRITLCGMISQ  122 (208)
Q Consensus        91 ~v~d~~g~-~~-------------------------~~~~~~~l~~---~G~~v~~g~~~~  122 (208)
                      +++++.|. ..                         ...+++.|..   +|+++.++...+
T Consensus        85 iLVnnAg~~~~~~~~~~~~~~~~~~~~vnl~g~~~~~~~~~~~m~~~~~gg~Ii~isS~~~  145 (251)
T d1zk4a1          85 TLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKGLGASIINMSSIEG  145 (251)
T ss_dssp             EEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEEECCGGG
T ss_pred             EEEeccccccccchhcccccchhhhccccccccchhHHHHHHHHHhcCCCCceEeeeccce
Confidence            99999873 20                         2445566644   358888887654

>d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 15-hydroxyprostaglandin dehydrogenase, PGDH
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.49  E-value=2.8e-07  Score=66.19  Aligned_cols=105  Identities=15%  Similarity=0.141  Sum_probs=73.5

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCC----Ce----eEecCCCccHHHHHHhHCC--C
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGF----DE----AFNYKEEPDLDAALKRYFP--E   87 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~----~~----v~~~~~~~~~~~~~~~~~~--~   87 (208)
                      .|+.+||+||++++|.+.++.+...|++|+.+++++++.+.+.+++..    ..    ..|..+.+++.+.+.+...  +
T Consensus         2 ~GKvalITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G   81 (254)
T d2gdza1           2 NGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVDHFG   81 (254)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhcCCCcEEEEEeecCCHHHHHHHHHHHHHHcC
Confidence            588999999999999999999999999999999999887766544421    11    2355544234444444332  3


Q ss_pred             CccEEEeCCCc-h--h---------------HHHHHHhhcc-----CCEEEEEecccc
Q 028523           88 GINIYFENVGG-K--M---------------LDAVLLNMRI-----QGRITLCGMISQ  122 (208)
Q Consensus        88 ~~d~v~d~~g~-~--~---------------~~~~~~~l~~-----~G~~v~~g~~~~  122 (208)
                      ++|+++++.|. .  .               ...+++.|.+     +|+++.+++..+
T Consensus        82 ~iDilVnnAg~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~~~g~Iv~isS~~~  139 (254)
T d2gdza1          82 RLDILVNNAGVNNEKNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAG  139 (254)
T ss_dssp             CCCEEEECCCCCCSSSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGG
T ss_pred             CcCeecccccccccccchheeeeehhhHHHHHHHHHHHHHHhhcCCCcEEEeeccHhh
Confidence            79999999883 2  1               2344555543     488999987664

>d1l7da1 c.2.1.4 (A:144-326) Nicotinamide nucleotide transhydrogenase dI component {Rhodospirillum rubrum [TaxId: 1085]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Nicotinamide nucleotide transhydrogenase dI component
species: Rhodospirillum rubrum [TaxId: 1085]

Probab=98.48  E-value=1.2e-06  Score=58.67  Aligned_cols=105  Identities=13%  Similarity=0.065  Sum_probs=75.7

Q ss_pred             CCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeE-ecCCC------------------ccHHH
Q 028523           19 GEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAF-NYKEE------------------PDLDA   79 (208)
Q Consensus        19 g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~v~-~~~~~------------------~~~~~   79 (208)
                      .-+|+|+|+ |.+|+.|++.|+.+|++|.+.+.+++++++++ +++...+- ++...                  ....+
T Consensus        29 pa~VvViGa-GvaG~~Aa~~A~~lGA~V~v~D~~~~~~~~l~-~l~~~~i~~~~~~~~~~~~~~gyA~~~s~~~~~~~~~  106 (183)
T d1l7da1          29 PARVLVFGV-GVAGLQAIATAKRLGAVVMATDVRAATKEQVE-SLGGKFITVDDEAMKTAETAGGYAKEMGEEFRKKQAE  106 (183)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCSTTHHHHH-HTTCEECCC-----------------------CCHHH
T ss_pred             CcEEEEEcC-cHHHHHHHHHHHHcCCEEEEEeccHHHHHHHH-HhhcceEEEeccccccccccccchhhcCHHHHHHHHH
Confidence            457999996 99999999999999999999999999999999 77763321 00000                  01122


Q ss_pred             HHHhHCCCCccEEEeCCC---ch----hHHHHHHhhccCCEEEEEecccccCCC
Q 028523           80 ALKRYFPEGINIYFENVG---GK----MLDAVLLNMRIQGRITLCGMISQYNND  126 (208)
Q Consensus        80 ~~~~~~~~~~d~v~d~~g---~~----~~~~~~~~l~~~G~~v~~g~~~~~~~~  126 (208)
                      .+.+... ..|+||-++-   ..    .-+++.+.|+||+.++.+....+.+.+
T Consensus       107 ~l~~~l~-~aDlVI~talipG~~aP~lit~~mv~~Mk~GSVIVDvaidqGGn~E  159 (183)
T d1l7da1         107 AVLKELV-KTDIAITTALIPGKPAPVLITEEMVTKMKPGSVIIDLAVEAGGNCP  159 (183)
T ss_dssp             HHHHHHT-TCSEEEECCCCTTSCCCCCSCHHHHTTSCTTCEEEETTGGGTCSST
T ss_pred             HHHHHHH-hhhhheeeeecCCcccceeehHHHHHhcCCCcEEEEEeecCCCccc
Confidence            2222222 4899998753   11    357899999999999999988876544

>d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (s)-1-phenylethanol dehydrogenase
species: Azoarcus sp. ebn1 [TaxId: 76114]

Probab=98.47  E-value=7e-07  Score=63.73  Aligned_cols=105  Identities=13%  Similarity=0.167  Sum_probs=71.3

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHH-HHHHHHhcCCCe---eEecCCCccHHHHHHhHCC--CCccE
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDK-VDLLKNKFGFDE---AFNYKEEPDLDAALKRYFP--EGINI   91 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~-~~~~~~~~g~~~---v~~~~~~~~~~~~~~~~~~--~~~d~   91 (208)
                      +|+.+||+||++++|.+.++.+...|++|+++++++++ .+...+++|...   ..|..+.++..+.+.+...  +++|+
T Consensus         4 ~gKvalVTGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~~~~g~~~~~~~~Dvs~~~~v~~~~~~~~~~~G~iDi   83 (247)
T d2ew8a1           4 KDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAPEAEAAIRNLGRRVLTVKCDVSQPGDVEAFGKQVISTFGRCDI   83 (247)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCchHHHHHHHHHcCCcEEEEEeeCCCHHHHHHHHHHHHHHcCCCCE
Confidence            57899999999999999999999999999999987543 223332666542   3355544233333333322  36999


Q ss_pred             EEeCCCc-hh-------------------------HHHHHHhhcc--CCEEEEEecccc
Q 028523           92 YFENVGG-KM-------------------------LDAVLLNMRI--QGRITLCGMISQ  122 (208)
Q Consensus        92 v~d~~g~-~~-------------------------~~~~~~~l~~--~G~~v~~g~~~~  122 (208)
                      ++++.|. ..                         .+.+++.|..  +|+++.+++...
T Consensus        84 lVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Iv~isS~~~  142 (247)
T d2ew8a1          84 LVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRNGWGRIINLTSTTY  142 (247)
T ss_dssp             EEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGG
T ss_pred             EEECCCCCCCCChHhCCHHHhhhhheeehhhhhHHHHHHHhHHHhcCCCCccccccchh
Confidence            9999873 20                         2345556643  689999987664

>d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein R05D8.7
species: Caenorhabditis elegans [TaxId: 6239]

Probab=98.43  E-value=2.8e-07  Score=66.81  Aligned_cols=80  Identities=15%  Similarity=0.287  Sum_probs=57.9

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhc---CCC--e----eEecCCCccHHHHHHhHCC--
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKF---GFD--E----AFNYKEEPDLDAALKRYFP--   86 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~---g~~--~----v~~~~~~~~~~~~~~~~~~--   86 (208)
                      +|+++||+||++++|.+.++.+...|++|+++++++++.+.+.+++   +..  .    ..|..+.++..+.+.+...  
T Consensus         4 ~gK~alVTGas~GIG~aia~~la~~Ga~V~l~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~~~~~   83 (272)
T d1xkqa_           4 SNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINSTLKQF   83 (272)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCcCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCCceEEEEccCCCHHHHHHHHHHHHHHh
Confidence            5789999999999999999999999999999999998877665433   221  1    2344444233333333322  


Q ss_pred             CCccEEEeCCC
Q 028523           87 EGINIYFENVG   97 (208)
Q Consensus        87 ~~~d~v~d~~g   97 (208)
                      +++|+++++.|
T Consensus        84 g~iDilvnnAG   94 (272)
T d1xkqa_          84 GKIDVLVNNAG   94 (272)
T ss_dssp             SCCCEEEECCC
T ss_pred             CCceEEEeCCc
Confidence            36999999876

>d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: D(-)-3-hydroxybutyrate dehydrogenase
species: Pseudomonas fragi [TaxId: 296]

Probab=98.43  E-value=7.1e-07  Score=64.22  Aligned_cols=106  Identities=15%  Similarity=0.214  Sum_probs=70.9

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCH-HHHHHHHH----hcCCCe---eEecCCCccHHHHHHhHCC--C
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSK-DKVDLLKN----KFGFDE---AFNYKEEPDLDAALKRYFP--E   87 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~-~~~~~~~~----~~g~~~---v~~~~~~~~~~~~~~~~~~--~   87 (208)
                      +|+.+||+||++++|.+.++.+...|++|+++.+++ +..+.+.+    ..|...   ..|..+.++..+.+.+...  +
T Consensus         3 ~gK~alITGas~GIG~aiA~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~G   82 (260)
T d1x1ta1           3 KGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGLVDNAVRQMG   82 (260)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHHHHHHHHHTSCEEEECCCTTSHHHHHHHHHHHHHHHS
T ss_pred             CcCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHhC
Confidence            688999999999999999999999999999999874 44444332    344432   2344443233333333322  3


Q ss_pred             CccEEEeCCCch-h-------------------------HHHHHHhhcc--CCEEEEEeccccc
Q 028523           88 GINIYFENVGGK-M-------------------------LDAVLLNMRI--QGRITLCGMISQY  123 (208)
Q Consensus        88 ~~d~v~d~~g~~-~-------------------------~~~~~~~l~~--~G~~v~~g~~~~~  123 (208)
                      ++|+++++.|.. .                         ...+++.|.+  +|+++.+++..+.
T Consensus        83 ~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Iv~isS~~~~  146 (260)
T d1x1ta1          83 RIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQGFGRIINIASAHGL  146 (260)
T ss_dssp             CCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGT
T ss_pred             CCcEEEeecccccCCchhhhhHHhhhhhhhccccccccccchhhhhHhhcCCceEeecccccce
Confidence            699999998731 0                         2445666654  6899999877653

>d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase)
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=98.43  E-value=9.9e-07  Score=63.85  Aligned_cols=105  Identities=20%  Similarity=0.282  Sum_probs=71.3

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCH-HHHHHHHH---hcCCCe---eEecCCCccHHHHHHhHCC--CC
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSK-DKVDLLKN---KFGFDE---AFNYKEEPDLDAALKRYFP--EG   88 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~-~~~~~~~~---~~g~~~---v~~~~~~~~~~~~~~~~~~--~~   88 (208)
                      +|+++||+||++++|.+.++.+...|++|++++++. +..+.+.+   +.|.+.   ..|..+.+++.+.+.+...  ++
T Consensus        17 ~gK~~lITGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~~g~   96 (272)
T d1g0oa_          17 EGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDAACVKANVGVVEDIVRMFEEAVKIFGK   96 (272)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHHHhhCCceeeEeCCCCCHHHHHHHHHHHHHHhCC
Confidence            589999999999999999999999999999988664 33333321   445543   2344443234444443322  36


Q ss_pred             ccEEEeCCCch--------------------------hHHHHHHhhccCCEEEEEecccc
Q 028523           89 INIYFENVGGK--------------------------MLDAVLLNMRIQGRITLCGMISQ  122 (208)
Q Consensus        89 ~d~v~d~~g~~--------------------------~~~~~~~~l~~~G~~v~~g~~~~  122 (208)
                      +|+++++.+..                          ....+.+.|..+|+++.++....
T Consensus        97 idilV~nag~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~~g~~i~i~s~~~  156 (272)
T d1g0oa_          97 LDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIGGRLILMGSITG  156 (272)
T ss_dssp             CCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTTCEEEEECCGGG
T ss_pred             CCccccccccchhhhhhhhhhhHHHHHhhhccceeeeecccccccccccccccccccccc
Confidence            99999988732                          13567778888999888876543

>d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), I [TaxId: 4076]

Probab=98.42  E-value=5.6e-07  Score=64.66  Aligned_cols=81  Identities=16%  Similarity=0.220  Sum_probs=59.3

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHh---cCCCe---eEecCCCccH---HHHHHhHCCCC
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNK---FGFDE---AFNYKEEPDL---DAALKRYFPEG   88 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~---~g~~~---v~~~~~~~~~---~~~~~~~~~~~   88 (208)
                      +|+++||+||++++|.+.++.+...|++|+.+++++++.+.+.++   .+...   ..|..+.++.   .+.+.+..++.
T Consensus         5 ~gK~alITGas~GIG~aia~~la~~G~~V~i~~r~~~~l~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~g~   84 (258)
T d1ae1a_           5 KGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGLNVEGSVCDLLSRTERDKLMQTVAHVFDGK   84 (258)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTTSC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEeecCCHHHHHHHHHHHHHHhCCC
Confidence            789999999999999999999999999999999999887665433   34332   3455443222   23334444457


Q ss_pred             ccEEEeCCCc
Q 028523           89 INIYFENVGG   98 (208)
Q Consensus        89 ~d~v~d~~g~   98 (208)
                      +|+++++.|.
T Consensus        85 idilinnag~   94 (258)
T d1ae1a_          85 LNILVNNAGV   94 (258)
T ss_dssp             CCEEEECCCC
T ss_pred             cEEEeccccc
Confidence            9999998873

>d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 7-alpha-hydroxysteroid dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=98.41  E-value=4.4e-07  Score=65.14  Aligned_cols=80  Identities=19%  Similarity=0.284  Sum_probs=57.7

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHh---cCCCe---eEecCCCccHHHHHHhHCC--CCc
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNK---FGFDE---AFNYKEEPDLDAALKRYFP--EGI   89 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~---~g~~~---v~~~~~~~~~~~~~~~~~~--~~~   89 (208)
                      +|+++||+||++++|.+.++.+...|++|+.+++++++.+.+.++   .|...   ..|..+.++..+.+.+...  +++
T Consensus        10 ~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~l~~~g~~~~~~~~Dvs~~~~~~~~~~~~~~~~g~i   89 (255)
T d1fmca_          10 DGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFAISKLGKV   89 (255)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSSC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            689999999999999999999999999999999999887665433   34432   2344443233333333222  369


Q ss_pred             cEEEeCCC
Q 028523           90 NIYFENVG   97 (208)
Q Consensus        90 d~v~d~~g   97 (208)
                      |+++++.|
T Consensus        90 DilvnnAG   97 (255)
T d1fmca_          90 DILVNNAG   97 (255)
T ss_dssp             CEEEECCC
T ss_pred             CEeeeCCc
Confidence            99999987

>d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dehydrogenase/reductase SDR family member 6, DHRS6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.41  E-value=3.6e-07  Score=65.21  Aligned_cols=78  Identities=17%  Similarity=0.288  Sum_probs=58.6

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCe-eEecCCCccHHHHHHhHCCCCccEEEeCC
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDE-AFNYKEEPDLDAALKRYFPEGINIYFENV   96 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~-v~~~~~~~~~~~~~~~~~~~~~d~v~d~~   96 (208)
                      +|+++||+||++++|.+.++.+...|++|+.+++++++.+.+.+..+... +.|.... +..+...+.. +++|.++++.
T Consensus         5 ~gK~alITGas~GIG~aia~~la~~G~~Vi~~~r~~~~l~~~~~~~~~~~~~~d~~~~-~~~~~~~~~~-~~id~lVn~a   82 (245)
T d2ag5a1           5 DGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELEKYPGIQTRVLDVTKK-KQIDQFANEV-ERLDVLFNVA   82 (245)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHGGGGGSTTEEEEECCTTCH-HHHHHHHHHC-SCCSEEEECC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhccCCceeeeecccc-cccccccccc-ccceeEEecc
Confidence            68899999999999999999999999999999999988887774444322 3343333 3444443333 3699999987


Q ss_pred             C
Q 028523           97 G   97 (208)
Q Consensus        97 g   97 (208)
                      |
T Consensus        83 g   83 (245)
T d2ag5a1          83 G   83 (245)
T ss_dssp             C
T ss_pred             c
Confidence            7

>d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Levodione reductase
species: Corynebacterium aquaticum [TaxId: 144185]

Probab=98.40  E-value=6.1e-07  Score=64.49  Aligned_cols=105  Identities=18%  Similarity=0.214  Sum_probs=72.2

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhc---CC-Ce----eEecCCCccHHHHHHhHCC--C
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKF---GF-DE----AFNYKEEPDLDAALKRYFP--E   87 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~---g~-~~----v~~~~~~~~~~~~~~~~~~--~   87 (208)
                      +|+++||+||++++|.+.++.+...|++|+++++++++.+.+.+++   +. ..    ..|..+.++..+.+.+...  +
T Consensus         3 ~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~~~G   82 (258)
T d1iy8a_           3 TDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATTERFG   82 (258)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhCCCCeEEEEeccCCCHHHHHHHHHHHHHHhC
Confidence            5789999999999999999999999999999999998876654332   21 12    2355554234333333322  3


Q ss_pred             CccEEEeCCC-c-h--h-----------------------HHHHHHhhc--cCCEEEEEecccc
Q 028523           88 GINIYFENVG-G-K--M-----------------------LDAVLLNMR--IQGRITLCGMISQ  122 (208)
Q Consensus        88 ~~d~v~d~~g-~-~--~-----------------------~~~~~~~l~--~~G~~v~~g~~~~  122 (208)
                      ++|+++++.| . .  .                       .+.+++.|.  .+|+++.+++...
T Consensus        83 ~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Ii~isS~~~  146 (258)
T d1iy8a_          83 RIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQGSGMVVNTASVGG  146 (258)
T ss_dssp             CCSEEEECCCCCCCCBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGG
T ss_pred             CCCEEEECCcccccCCchhhhhhhHHHHHhhhhccchhhhhhhhHhhhhhhcCCCCcccccHhh
Confidence            6999999877 2 1  0                       234555554  4799999987664

>d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,6,8-tetrahydroxynaphthalene reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=98.40  E-value=9e-07  Score=63.62  Aligned_cols=106  Identities=21%  Similarity=0.291  Sum_probs=70.5

Q ss_pred             CCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCH-HHHHHHHH---hcCCCe---eEecCCCccHHHHHHhHCC--
Q 028523           16 PKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSK-DKVDLLKN---KFGFDE---AFNYKEEPDLDAALKRYFP--   86 (208)
Q Consensus        16 ~~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~-~~~~~~~~---~~g~~~---v~~~~~~~~~~~~~~~~~~--   86 (208)
                      .-.|+++||+||++++|.+.++.+...|++|++++++. +..+.+.+   +.|...   ..|..+..+..+.+.+...  
T Consensus         3 ~L~GK~alITGas~GIG~aia~~la~~G~~Vvi~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~~   82 (259)
T d1ja9a_           3 PLAGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADISKPSEVVALFDKAVSHF   82 (259)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHHcCCCceEecCCCCCHHHHHHHHHHHHHHc
Confidence            34689999999999999999999999999999876544 43343332   456543   2344433233333333322  


Q ss_pred             CCccEEEeCCCch--------------------------hHHHHHHhhccCCEEEEEeccc
Q 028523           87 EGINIYFENVGGK--------------------------MLDAVLLNMRIQGRITLCGMIS  121 (208)
Q Consensus        87 ~~~d~v~d~~g~~--------------------------~~~~~~~~l~~~G~~v~~g~~~  121 (208)
                      +++|+++++.|..                          ....+++.|+.+|+++.+....
T Consensus        83 g~idilinnag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~g~~iii~s~~  143 (259)
T d1ja9a_          83 GGLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRRGGRIILTSSIA  143 (259)
T ss_dssp             SCEEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEEEEEEEEECCGG
T ss_pred             CCCcEEEeccccccccccccchHHHHHHHHhhccceeeeehhhhhhhhhcCCccccccccc
Confidence            2699999998732                          1356777888888887776544

>d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=98.40  E-value=6.6e-08  Score=68.78  Aligned_cols=99  Identities=14%  Similarity=0.193  Sum_probs=65.0

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeEecCC--C---ccHHHHHHhHCCC-CccE
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKE--E---PDLDAALKRYFPE-GINI   91 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~v~~~~~--~---~~~~~~~~~~~~~-~~d~   91 (208)
                      +|++|||+||++++|.+.++.+...|++|+.+++++.+...      ....+....  .   +.....+.+.... ++|+
T Consensus         1 egK~vlITGas~GIG~a~a~~l~~~G~~V~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iD~   74 (236)
T d1dhra_           1 EARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEEAS------ASVIVKMTDSFTEQADQVTAEVGKLLGDQKVDA   74 (236)
T ss_dssp             CCCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSCCTTSS------EEEECCCCSCHHHHHHHHHHHHHHHHTTCCEEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCcccccc------ccceeecccCcHHHHHHHHHHHHHHhCCCCceE
Confidence            47899999999999999999999999999999866543210      001111111  0   0122233333333 7999


Q ss_pred             EEeCCCc-h---h-----------------------HHHHHHhhccCCEEEEEecccc
Q 028523           92 YFENVGG-K---M-----------------------LDAVLLNMRIQGRITLCGMISQ  122 (208)
Q Consensus        92 v~d~~g~-~---~-----------------------~~~~~~~l~~~G~~v~~g~~~~  122 (208)
                      ++++.|. .   .                       ...+++.|+++|+++.++....
T Consensus        75 lInnAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~G~Iv~isS~~~  132 (236)
T d1dhra_          75 ILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKEGGLLTLAGAKAA  132 (236)
T ss_dssp             EEECCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGG
T ss_pred             EEECCcccccccchhcCCHHHHHHHHHHcchHHHHHHHHHHHhcccccceeEEccHHH
Confidence            9998873 1   0                       2446667888999999987654

>d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=98.39  E-value=2e-06  Score=63.15  Aligned_cols=105  Identities=22%  Similarity=0.253  Sum_probs=70.9

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCC---------HHHHHHHHHhc---CCCeeEecCCCccHHHHHHhHC
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGS---------KDKVDLLKNKF---GFDEAFNYKEEPDLDAALKRYF   85 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s---------~~~~~~~~~~~---g~~~v~~~~~~~~~~~~~~~~~   85 (208)
                      +|+++||+||++|+|.+.++.+...|++|++++++         .+..+.+.+++   +.....+..+.++..+.+....
T Consensus         6 ~gKvalITGas~GIG~aiA~~la~~Ga~Vvi~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~~   85 (302)
T d1gz6a_           6 DGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGGKAVANYDSVEAGEKLVKTAL   85 (302)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSCBCCSHHHHHHHHHHHHTTCEEEEECCCGGGHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCchhhhhhhhHHHHHHHHHHHhhcccccccccchHHHHHHHHHHHH
Confidence            58999999999999999999999999999998654         23333332232   3334556655434444444332


Q ss_pred             --CCCccEEEeCCCc-h-------------------------hHHHHHHhhcc--CCEEEEEecccc
Q 028523           86 --PEGINIYFENVGG-K-------------------------MLDAVLLNMRI--QGRITLCGMISQ  122 (208)
Q Consensus        86 --~~~~d~v~d~~g~-~-------------------------~~~~~~~~l~~--~G~~v~~g~~~~  122 (208)
                        -+++|+++++.|. .                         ..+.+++.|..  +|++|.+++..+
T Consensus        86 ~~~G~iDiLVnNAGi~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IV~isS~~~  152 (302)
T d1gz6a_          86 DTFGRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQNYGRIIMTASASG  152 (302)
T ss_dssp             HHTSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCHHH
T ss_pred             HHcCCCCEEEECCccCCCCChhhCCHHHHhhhhceeehhhHHHHHHhHHHHHhCCCcEEEEeCChhh
Confidence              2379999999872 1                         03456666643  689999987654

>d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 11-beta-hydroxysteroid dehydrogenase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.38  E-value=7.1e-07  Score=64.53  Aligned_cols=106  Identities=18%  Similarity=0.171  Sum_probs=68.9

Q ss_pred             CCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHh----cCCCe-eE--ecCCCccHHHHHHhHC--CC
Q 028523           17 KQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNK----FGFDE-AF--NYKEEPDLDAALKRYF--PE   87 (208)
Q Consensus        17 ~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~----~g~~~-v~--~~~~~~~~~~~~~~~~--~~   87 (208)
                      -+|+++||+||++|+|++.++.+...|++|+.+++++++.+.+.++    .+... .+  +..+............  .+
T Consensus        12 L~GK~alITGassGIG~aiA~~la~~G~~Vil~~r~~~~l~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~g   91 (269)
T d1xu9a_          12 LQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVAQAGKLMG   91 (269)
T ss_dssp             GTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCSEEEEEECCTTCHHHHHHHHHHHHHHHT
T ss_pred             cCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHhhhhcccchhhhhhhhhHHHHHHHHHHHHHHhC
Confidence            4689999999999999999999999999999999999988776533    23322 22  2222211111122211  13


Q ss_pred             CccEEEeCCCch-h-------------------------HHHHHHhhcc-CCEEEEEecccc
Q 028523           88 GINIYFENVGGK-M-------------------------LDAVLLNMRI-QGRITLCGMISQ  122 (208)
Q Consensus        88 ~~d~v~d~~g~~-~-------------------------~~~~~~~l~~-~G~~v~~g~~~~  122 (208)
                      ++|+++++.|.. .                         ...++..|+. +|+++.+++..+
T Consensus        92 ~~~~li~nag~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~lp~m~~~~G~ii~isS~~~  153 (269)
T d1xu9a_          92 GLDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQSNGSIVVVSSLAG  153 (269)
T ss_dssp             SCSEEEECCCCCCCCCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEGGG
T ss_pred             CccccccccccccccccccCCHHHhhhheeeehhhHHHHHHHHHHHHHhcCCcceEeccchh
Confidence            688888876531 0                         2344445543 799999887664

>d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein F25D1.5
species: Caenorhabditis elegans [TaxId: 6239]

Probab=98.37  E-value=3.6e-07  Score=66.31  Aligned_cols=80  Identities=19%  Similarity=0.334  Sum_probs=57.7

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhc---CCC--e----eEecCCCccHHHHHHhHCC--
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKF---GFD--E----AFNYKEEPDLDAALKRYFP--   86 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~---g~~--~----v~~~~~~~~~~~~~~~~~~--   86 (208)
                      +|++++|+||++++|.+.++.+...|++|+++++++++.+.+.+++   |..  .    ..|..+.++..+.+.+...  
T Consensus         3 ~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   82 (274)
T d1xhla_           3 SGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTTLAKF   82 (274)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCCCcceEEEEeeCCCHHHHHHHHHHHHHHc
Confidence            5899999999999999999999999999999999998877665433   321  1    2354444233333333322  


Q ss_pred             CCccEEEeCCC
Q 028523           87 EGINIYFENVG   97 (208)
Q Consensus        87 ~~~d~v~d~~g   97 (208)
                      +++|+++++.|
T Consensus        83 G~iDilVnnAG   93 (274)
T d1xhla_          83 GKIDILVNNAG   93 (274)
T ss_dssp             SCCCEEEECCC
T ss_pred             CCceEEEeecc
Confidence            36999999876

>d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Peroxisomal trans 2-enoyl CoA reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.37  E-value=8.1e-07  Score=65.14  Aligned_cols=82  Identities=17%  Similarity=0.246  Sum_probs=58.1

Q ss_pred             CCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhc--------CCCe---eEecCCCccHHHHHHhH
Q 028523           16 PKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKF--------GFDE---AFNYKEEPDLDAALKRY   84 (208)
Q Consensus        16 ~~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~--------g~~~---v~~~~~~~~~~~~~~~~   84 (208)
                      .-+|+++||+||++++|.+.++.+...|++|+++++++++.+.+.+++        +...   ..|..+.++..+.+.+.
T Consensus         9 ~L~gKvalITGas~GIG~aia~~la~~Ga~Vvi~~r~~~~l~~~~~el~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~   88 (297)
T d1yxma1           9 LLQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVKST   88 (297)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhhccccCceEEEEeccCCCHHHHHHHHHHH
Confidence            347899999999999999999999999999999999988876554333        1211   23444432333334333


Q ss_pred             CC--CCccEEEeCCC
Q 028523           85 FP--EGINIYFENVG   97 (208)
Q Consensus        85 ~~--~~~d~v~d~~g   97 (208)
                      ..  +++|+++++.|
T Consensus        89 ~~~~G~iDiLVnnAg  103 (297)
T d1yxma1          89 LDTFGKINFLVNNGG  103 (297)
T ss_dssp             HHHHSCCCEEEECCC
T ss_pred             HHHhCCeEEEEeecc
Confidence            22  36999999887

>d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Streptomyces coelicolor [TaxId: 1902]

Probab=98.37  E-value=9.5e-07  Score=63.42  Aligned_cols=80  Identities=15%  Similarity=0.280  Sum_probs=57.3

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHh---cCCCe---eEecCCCccHHHHHHhHCC--CCc
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNK---FGFDE---AFNYKEEPDLDAALKRYFP--EGI   89 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~---~g~~~---v~~~~~~~~~~~~~~~~~~--~~~   89 (208)
                      .|+.+||+||++++|.+.++.+...|++|+++++++++.+.+.++   .|...   ..|..+.++..+.+.+...  +++
T Consensus         1 DgKValITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~l~~~g~~~~~~~~Dvs~~~~v~~~~~~~~~~~g~i   80 (257)
T d2rhca1           1 DSEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVPEIEALVAAVVERYGPV   80 (257)
T ss_dssp             CCCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTCSC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHHhCCC
Confidence            367789999999999999999999999999999998887665443   34432   2344444233333333322  369


Q ss_pred             cEEEeCCC
Q 028523           90 NIYFENVG   97 (208)
Q Consensus        90 d~v~d~~g   97 (208)
                      |+++++.|
T Consensus        81 DilVnnAG   88 (257)
T d2rhca1          81 DVLVNNAG   88 (257)
T ss_dssp             SEEEECCC
T ss_pred             CEEEeccc
Confidence            99999987

>d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase (5l265)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=98.37  E-value=4e-07  Score=65.68  Aligned_cols=80  Identities=13%  Similarity=0.265  Sum_probs=57.8

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhc---CCC--e----eEecCCCccHHHHHHhHCC--
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKF---GFD--E----AFNYKEEPDLDAALKRYFP--   86 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~---g~~--~----v~~~~~~~~~~~~~~~~~~--   86 (208)
                      +|+.+||+||++++|.+.++.+...|++|+++++++++.+.+.+++   |..  .    ..|..+..+..+.+.+...  
T Consensus         4 ~gKvalVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~~~   83 (264)
T d1spxa_           4 AEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTTLGKF   83 (264)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCcCceEEEEccCCCHHHHHHHHHHHHHHh
Confidence            6889999999999999999999999999999999998877665433   321  1    2355444233333333322  


Q ss_pred             CCccEEEeCCC
Q 028523           87 EGINIYFENVG   97 (208)
Q Consensus        87 ~~~d~v~d~~g   97 (208)
                      +++|+++++.|
T Consensus        84 g~iDilvnnAG   94 (264)
T d1spxa_          84 GKLDILVNNAG   94 (264)
T ss_dssp             SCCCEEEECCC
T ss_pred             CCCCEeecccc
Confidence            36999999877

>d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Mannitol dehydrogenase
species: Mushroom (Agaricus bisporus) [TaxId: 5341]

Probab=98.35  E-value=4.2e-07  Score=65.45  Aligned_cols=80  Identities=13%  Similarity=0.155  Sum_probs=57.2

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH----hcCCCe---eEecCCCccHHHHHHhHCC--CC
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKN----KFGFDE---AFNYKEEPDLDAALKRYFP--EG   88 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~----~~g~~~---v~~~~~~~~~~~~~~~~~~--~~   88 (208)
                      +|+++||+||++++|.+.++.+...|++|+++++++++.+.+.+    ++|...   ..|..+.++..+.+.+...  ++
T Consensus         8 ~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   87 (260)
T d1h5qa_           8 VNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSNTDIVTKTIQQIDADLGP   87 (260)
T ss_dssp             TTEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHHHSCS
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence            58899999999999999999999999999999999876654432    445432   3455544233333333322  37


Q ss_pred             ccEEEeCCC
Q 028523           89 INIYFENVG   97 (208)
Q Consensus        89 ~d~v~d~~g   97 (208)
                      +|+++++.|
T Consensus        88 iDilVnnAg   96 (260)
T d1h5qa_          88 ISGLIANAG   96 (260)
T ss_dssp             EEEEEECCC
T ss_pred             CcEeccccc
Confidence            999999887

>d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR)
species: Human (Homo sapiens), [TaxId: 9606]

Probab=98.33  E-value=1e-06  Score=64.52  Aligned_cols=80  Identities=15%  Similarity=0.236  Sum_probs=56.5

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH----hcCCCe-e--EecCCCccHHHHHHhHC--CCC
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKN----KFGFDE-A--FNYKEEPDLDAALKRYF--PEG   88 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~----~~g~~~-v--~~~~~~~~~~~~~~~~~--~~~   88 (208)
                      +|+++||+||++++|.+.++.+...|++|+.+++++++.+.+.+    +.|... .  .|..+.+...+.+....  .++
T Consensus        24 ~gK~alITGas~GIG~aiA~~la~~Ga~Vii~~r~~~~l~~~~~~l~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~~g~  103 (294)
T d1w6ua_          24 QGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRDPDMVQNTVSELIKVAGH  103 (294)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHTCS
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHHhcCCceEEEEecccChHHHHHHhhhhhhhccc
Confidence            57999999999999999999999999999999999887655443    334432 2  34444323333333222  237


Q ss_pred             ccEEEeCCC
Q 028523           89 INIYFENVG   97 (208)
Q Consensus        89 ~d~v~d~~g   97 (208)
                      +|+++++.|
T Consensus       104 iDilvnnAg  112 (294)
T d1w6ua_         104 PNIVINNAA  112 (294)
T ss_dssp             CSEEEECCC
T ss_pred             cchhhhhhh
Confidence            999999987

>d1gpja2 c.2.1.7 (A:144-302) Glutamyl tRNA-reductase middle domain {Archaeon Methanopyrus kandleri [TaxId: 2320]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamyl tRNA-reductase middle domain
species: Archaeon Methanopyrus kandleri [TaxId: 2320]

Probab=98.30  E-value=1.7e-05  Score=52.38  Aligned_cols=76  Identities=18%  Similarity=0.223  Sum_probs=58.5

Q ss_pred             cCCCCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHHHHhHCCCCccEE
Q 028523           14 CSPKQGEYVFVSAASGAVGQLVGQFAKLVGC-YVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIY   92 (208)
Q Consensus        14 ~~~~~g~~vli~ga~g~vG~~a~qla~~~g~-~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~d~v   92 (208)
                      ..--.+.+|||.|+ |.+|...++.+...|+ +++++.|+.++.+.+.+++|. .+.++.   ++.+.+.     .+|+|
T Consensus        19 ~~~l~~~~ilviGa-G~~g~~v~~~L~~~g~~~i~v~nRt~~ka~~l~~~~~~-~~~~~~---~~~~~l~-----~~Div   88 (159)
T d1gpja2          19 LGSLHDKTVLVVGA-GEMGKTVAKSLVDRGVRAVLVANRTYERAVELARDLGG-EAVRFD---ELVDHLA-----RSDVV   88 (159)
T ss_dssp             HSCCTTCEEEEESC-CHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHHHTC-EECCGG---GHHHHHH-----TCSEE
T ss_pred             hCCcccCeEEEECC-CHHHHHHHHHHHhcCCcEEEEEcCcHHHHHHHHHhhhc-ccccch---hHHHHhc-----cCCEE
Confidence            33457889999996 9999999999988998 799999998887766658885 344443   4555554     39999


Q ss_pred             EeCCCch
Q 028523           93 FENVGGK   99 (208)
Q Consensus        93 ~d~~g~~   99 (208)
                      |.|++++
T Consensus        89 i~atss~   95 (159)
T d1gpja2          89 VSATAAP   95 (159)
T ss_dssp             EECCSSS
T ss_pred             EEecCCC
Confidence            9999854

>d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase
species: Bacillus megaterium [TaxId: 1404]

Probab=98.29  E-value=9.9e-07  Score=63.46  Aligned_cols=80  Identities=18%  Similarity=0.223  Sum_probs=55.0

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHH-HHHHHHH---hcCCCe---eEecCCCccHHHHHHhHCC--CC
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKD-KVDLLKN---KFGFDE---AFNYKEEPDLDAALKRYFP--EG   88 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~-~~~~~~~---~~g~~~---v~~~~~~~~~~~~~~~~~~--~~   88 (208)
                      +|++++|+||++++|.+.++.+...|++|++++++.+ ..+.+.+   +.|...   ..|..+.++..+.+.+...  ++
T Consensus         6 ~gK~alITGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~G~   85 (261)
T d1geea_           6 EGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTVESDVINLVQSAIKEFGK   85 (261)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence            6899999999999999999999999999999998754 3333322   455432   2344444233333333322  36


Q ss_pred             ccEEEeCCC
Q 028523           89 INIYFENVG   97 (208)
Q Consensus        89 ~d~v~d~~g   97 (208)
                      +|+++++.|
T Consensus        86 iDiLVnnAG   94 (261)
T d1geea_          86 LDVMINNAG   94 (261)
T ss_dssp             CCEEEECCC
T ss_pred             CCEeeccce
Confidence            999999987

>d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Thermus thermophilus [TaxId: 274]

Probab=98.27  E-value=2e-06  Score=61.60  Aligned_cols=105  Identities=14%  Similarity=0.105  Sum_probs=68.3

Q ss_pred             CCCEEEEecCCc--hHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH---hcCCCee--EecCCCccHHHHHHhHCC--CC
Q 028523           18 QGEYVFVSAASG--AVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKN---KFGFDEA--FNYKEEPDLDAALKRYFP--EG   88 (208)
Q Consensus        18 ~g~~vli~ga~g--~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~---~~g~~~v--~~~~~~~~~~~~~~~~~~--~~   88 (208)
                      +|+++||+||+|  |+|.+.++.+...|++|+++.++++..+.+++   ..+....  .|..+..+..+.+.+...  ++
T Consensus         7 ~gK~alITGas~~~GIG~aiA~~la~~Ga~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~   86 (256)
T d1ulua_           7 SGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRPEAEKLAEALGGALLFRADVTQDEELDALFAGVKEAFGG   86 (256)
T ss_dssp             TTCEEEEESCCCSSSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHTTCCEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred             CCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHHHHhhhccCcccccccccCCHHHHHHHHHHHHHhcCC
Confidence            689999999987  89999999998999999999988765544431   3333333  333433233333332221  36


Q ss_pred             ccEEEeCCCc-h--h---------------------------HHHHHHhhccCCEEEEEecccc
Q 028523           89 INIYFENVGG-K--M---------------------------LDAVLLNMRIQGRITLCGMISQ  122 (208)
Q Consensus        89 ~d~v~d~~g~-~--~---------------------------~~~~~~~l~~~G~~v~~g~~~~  122 (208)
                      +|+++++.|. .  .                           .......|+++|+++.++....
T Consensus        87 iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~G~Iv~isS~~~  150 (256)
T d1ulua_          87 LDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLREGGGIVTLTYYAS  150 (256)
T ss_dssp             EEEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEEECGGG
T ss_pred             ceEEEeccccccccccccchhhhhhhhhhHhhhhhHHHHHHHHHHHHHHhccCCEEEEEeehHh
Confidence            9999998762 1  0                           1234446677899998887654

>d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=98.27  E-value=1.1e-07  Score=67.51  Aligned_cols=98  Identities=16%  Similarity=0.150  Sum_probs=63.6

Q ss_pred             CCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeEecCCC-----ccHHHHHHhH-CCCCccEE
Q 028523           19 GEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEE-----PDLDAALKRY-FPEGINIY   92 (208)
Q Consensus        19 g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~-----~~~~~~~~~~-~~~~~d~v   92 (208)
                      +.+|||+||++++|.+.++.+...|++|+.+++++++....      ...+.....     ....+.+... ..+++|++
T Consensus         2 ~gkVlITGas~GIG~aia~~l~~~G~~V~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~g~iD~l   75 (235)
T d1ooea_           2 SGKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQADS------NILVDGNKNWTEQEQSILEQTASSLQGSQVDGV   75 (235)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCCTTSSE------EEECCTTSCHHHHHHHHHHHHHHHHTTCCEEEE
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCchhcccc------cceeccccCchhHHHHHHHHHHHHhcCCCeeEE
Confidence            45789999999999999999999999999999876532110      011111110     0111222222 23479999


Q ss_pred             EeCCCc-h---h-----------------------HHHHHHhhccCCEEEEEecccc
Q 028523           93 FENVGG-K---M-----------------------LDAVLLNMRIQGRITLCGMISQ  122 (208)
Q Consensus        93 ~d~~g~-~---~-----------------------~~~~~~~l~~~G~~v~~g~~~~  122 (208)
                      +++.|. .   .                       ....++.|+++|+++.++....
T Consensus        76 innAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~g~Iv~isS~~~  132 (235)
T d1ooea_          76 FCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKPGGLLQLTGAAAA  132 (235)
T ss_dssp             EECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGG
T ss_pred             EECCcccccccccccCcHHHHhhHhhhHHHHHHHHhhhcccccccceEEEEeccHHh
Confidence            998873 1   0                       2456677888999999987654

>d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=98.25  E-value=5.4e-06  Score=58.48  Aligned_cols=97  Identities=26%  Similarity=0.303  Sum_probs=66.7

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCe-eEecCCCccHHHHHHhHCCCCccEEEeCC
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDE-AFNYKEEPDLDAALKRYFPEGINIYFENV   96 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~-v~~~~~~~~~~~~~~~~~~~~~d~v~d~~   96 (208)
                      +|+++||+||++++|.+.++.+...|++|+.++++++..+    +.+... ..|.++  ... .+.+.. +++|+++++.
T Consensus         3 kgK~~lVTGas~GIG~aia~~l~~~Ga~V~~~~r~~~~l~----~~~~~~~~~Dv~~--~~~-~~~~~~-g~iD~lVnnA   74 (234)
T d1o5ia_           3 RDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEELLK----RSGHRYVVCDLRK--DLD-LLFEKV-KEVDILVLNA   74 (234)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHH----HTCSEEEECCTTT--CHH-HHHHHS-CCCSEEEECC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHH----hcCCcEEEcchHH--HHH-HHHHHh-CCCcEEEecc
Confidence            5789999999999999999999999999999999876544    444432 333332  333 333333 3699999988


Q ss_pred             Cchh--------------------------HHHHHHhhc--cCCEEEEEecccc
Q 028523           97 GGKM--------------------------LDAVLLNMR--IQGRITLCGMISQ  122 (208)
Q Consensus        97 g~~~--------------------------~~~~~~~l~--~~G~~v~~g~~~~  122 (208)
                      |...                          .+.+++.|+  .+|+++.++....
T Consensus        75 G~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~G~ii~i~S~~~  128 (234)
T d1o5ia_          75 GGPKAGFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEKGWGRIVAITSFSV  128 (234)
T ss_dssp             CCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGG
T ss_pred             cccCCcchhhhhhHHHHHHhhhhhhhhhhhhhcccccccccccccccccccccc
Confidence            7320                          234455554  3588888876543

>d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=98.24  E-value=3.6e-06  Score=59.83  Aligned_cols=102  Identities=22%  Similarity=0.290  Sum_probs=67.6

Q ss_pred             EEEEecCCchHHHHHHHHHHHcCCEEEEEe-CCHHHHHHHHH---hcCCCe---eEecCCCccHHHHHHhHCC--CCccE
Q 028523           21 YVFVSAASGAVGQLVGQFAKLVGCYVVGSA-GSKDKVDLLKN---KFGFDE---AFNYKEEPDLDAALKRYFP--EGINI   91 (208)
Q Consensus        21 ~vli~ga~g~vG~~a~qla~~~g~~v~~~~-~s~~~~~~~~~---~~g~~~---v~~~~~~~~~~~~~~~~~~--~~~d~   91 (208)
                      .+||+||++++|++.++.+...|++|+.++ ++++..+.+.+   +.|...   ..|..+.++..+.+.+...  +++|+
T Consensus         3 V~lITGas~GIG~a~a~~la~~Ga~V~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDi   82 (244)
T d1edoa_           3 VVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVSKEADVEAMMKTAIDAWGTIDV   82 (244)
T ss_dssp             EEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHTCEEEEEECCTTSHHHHHHHHHHHHHHSSCCSE
T ss_pred             EEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHHHHHHcCCCCc
Confidence            689999999999999999999999998875 45555554443   345432   2344444233333333322  37999


Q ss_pred             EEeCCCc-h-------------------------hHHHHHHhh--ccCCEEEEEecccc
Q 028523           92 YFENVGG-K-------------------------MLDAVLLNM--RIQGRITLCGMISQ  122 (208)
Q Consensus        92 v~d~~g~-~-------------------------~~~~~~~~l--~~~G~~v~~g~~~~  122 (208)
                      ++++.|. .                         ..+.+++.|  +.+|+++.+++..+
T Consensus        83 LVnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~IVnisS~~~  141 (244)
T d1edoa_          83 VVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRKGRIINIASVVG  141 (244)
T ss_dssp             EEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHH
T ss_pred             cccccccccccchhccchHHHHHHHhhhhhhHHHHHHHHHHHHHHcCCcEEEEEcChhh
Confidence            9999873 2                         034566666  34799999987654

>d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: meso-2,3-butanediol dehydrogenase
species: Klebsiella pneumoniae [TaxId: 573]

Probab=98.24  E-value=2.2e-06  Score=61.40  Aligned_cols=77  Identities=14%  Similarity=0.176  Sum_probs=54.7

Q ss_pred             EEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHh---cCCCe---eEecCCCccHHHHHHhHCC--CCccEE
Q 028523           21 YVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNK---FGFDE---AFNYKEEPDLDAALKRYFP--EGINIY   92 (208)
Q Consensus        21 ~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~---~g~~~---v~~~~~~~~~~~~~~~~~~--~~~d~v   92 (208)
                      .+||+||++++|++.++.+...|++|+.+++++++.+.+.++   .|...   ..|..+.++..+.+.+...  +++|++
T Consensus         3 ValITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~i~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDil   82 (255)
T d1gega_           3 VALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGHAVAVKVDVSDRDQVFAAVEQARKTLGGFDVI   82 (255)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHTTCCCEE
T ss_pred             EEEEcCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCCccEE
Confidence            469999999999999988888999999999999887765533   34332   2455544233333333322  369999


Q ss_pred             EeCCC
Q 028523           93 FENVG   97 (208)
Q Consensus        93 ~d~~g   97 (208)
                      +++.|
T Consensus        83 VnnAG   87 (255)
T d1gega_          83 VNNAG   87 (255)
T ss_dssp             EECCC
T ss_pred             Eeccc
Confidence            99887

>d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Bacterial sepiapterin reductase
species: Chlorobium tepidum [TaxId: 1097]

Probab=98.23  E-value=2e-06  Score=61.01  Aligned_cols=102  Identities=13%  Similarity=0.174  Sum_probs=69.1

Q ss_pred             EEEEecCCchHHHHHHHHHHHcCCE-------EEEEeCCHHHHHHHHHhc---CCCe---eEecCCCccHHHHHHhHCC-
Q 028523           21 YVFVSAASGAVGQLVGQFAKLVGCY-------VVGSAGSKDKVDLLKNKF---GFDE---AFNYKEEPDLDAALKRYFP-   86 (208)
Q Consensus        21 ~vli~ga~g~vG~~a~qla~~~g~~-------v~~~~~s~~~~~~~~~~~---g~~~---v~~~~~~~~~~~~~~~~~~-   86 (208)
                      .|||+||++|+|.+.++.+...|++       |+.+++++++.+.+.+++   |...   ..|..+.++..+.+.+... 
T Consensus         3 VvlITGas~GIG~aia~~la~~G~~~~~~~~~v~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~   82 (240)
T d2bd0a1           3 ILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTITADISDMADVRRLTTHIVER   82 (240)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTTTCEEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             EEEEccCCCHHHHHHHHHHHHhCccccccCcEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHH
Confidence            4799999999999999888888886       889999998877665443   4322   2355544233333333322 


Q ss_pred             -CCccEEEeCCCc-h-------------------------hHHHHHHhhcc--CCEEEEEecccc
Q 028523           87 -EGINIYFENVGG-K-------------------------MLDAVLLNMRI--QGRITLCGMISQ  122 (208)
Q Consensus        87 -~~~d~v~d~~g~-~-------------------------~~~~~~~~l~~--~G~~v~~g~~~~  122 (208)
                       +++|+++++.|. .                         ..+.+++.|..  +|+++.+++..+
T Consensus        83 ~g~iDilvnnAg~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Ii~isS~~~  147 (240)
T d2bd0a1          83 YGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQHSGHIFFITSVAA  147 (240)
T ss_dssp             TSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGG
T ss_pred             cCCcceeecccccccCCccccCCHHHHhhcCCEeehHHHHHHHHHhHHHHhcCCCceEEEechhh
Confidence             369999999873 2                         03456666744  689999987654

>d1npya1 c.2.1.7 (A:103-269) Shikimate 5-dehydrogenase-like protein HI0607 {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase-like protein HI0607
species: Haemophilus influenzae [TaxId: 727]

Probab=98.23  E-value=5.3e-06  Score=55.41  Aligned_cols=72  Identities=18%  Similarity=0.145  Sum_probs=55.8

Q ss_pred             HhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHHHHhHCCCCcc
Q 028523           12 EVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGC-YVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGIN   90 (208)
Q Consensus        12 ~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g~-~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~d   90 (208)
                      +...+.++.+|+|+|+ ||.+.+++..++..|+ +++++.|+.++.+.+.+.++...+ +...            ...+|
T Consensus        10 ~~~~~~~~~~vlIlGa-GGaarai~~aL~~~g~~~I~I~nR~~~ka~~L~~~~~~~~~-~~~~------------~~~~D   75 (167)
T d1npya1          10 EKYHLNKNAKVIVHGS-GGMAKAVVAAFKNSGFEKLKIYARNVKTGQYLAALYGYAYI-NSLE------------NQQAD   75 (167)
T ss_dssp             HHTTCCTTSCEEEECS-STTHHHHHHHHHHTTCCCEEEECSCHHHHHHHHHHHTCEEE-SCCT------------TCCCS
T ss_pred             HHcCCCCCCeEEEECC-CHHHHHHHHHHHHCCCCEEEEecccHHHHHHHHHhhhhhhh-hccc------------ccchh
Confidence            4456678899999995 9999999999999998 899999999998888766765332 2111            12589


Q ss_pred             EEEeCCC
Q 028523           91 IYFENVG   97 (208)
Q Consensus        91 ~v~d~~g   97 (208)
                      ++++|++
T Consensus        76 liINaTp   82 (167)
T d1npya1          76 ILVNVTS   82 (167)
T ss_dssp             EEEECSS
T ss_pred             hheeccc
Confidence            9999976

>d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Halohydrin dehalogenase HheC
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=98.23  E-value=1.2e-06  Score=62.78  Aligned_cols=101  Identities=15%  Similarity=0.073  Sum_probs=67.0

Q ss_pred             EEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCC-eeEecCCCccHHHHHHhHCC--CCccEEEeCCC
Q 028523           21 YVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFD-EAFNYKEEPDLDAALKRYFP--EGINIYFENVG   97 (208)
Q Consensus        21 ~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~-~v~~~~~~~~~~~~~~~~~~--~~~d~v~d~~g   97 (208)
                      ++||+||++++|++.++.+...|++|++++++.++.+.++ ..+.. ..+|..+..+..+.+.+...  +++|+++++.|
T Consensus         2 TAlVTGas~GiG~aiA~~la~~Ga~V~i~~r~~~~~~~~~-~~~~~~~~~dv~~~~~~~~~~~~~~~~~G~iDiLVnNAg   80 (252)
T d1zmta1           2 TAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELE-AFAETYPQLKPMSEQEPAELIEAVTSAYGQVDVLVSNDI   80 (252)
T ss_dssp             EEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHH-HHHHHCTTSEECCCCSHHHHHHHHHHHHSCCCEEEEECC
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-hhhCcEEEeccCCHHHHHHHHHHHHHHcCCCCEEEECCc
Confidence            6899999999999999999999999999999888777665 33211 11222222244443333322  36999998765


Q ss_pred             c--h--h-----------------------HHHHHHhhcc--CCEEEEEecccc
Q 028523           98 G--K--M-----------------------LDAVLLNMRI--QGRITLCGMISQ  122 (208)
Q Consensus        98 ~--~--~-----------------------~~~~~~~l~~--~G~~v~~g~~~~  122 (208)
                      .  .  .                       .+.+++.|..  +|+++.+++...
T Consensus        81 ~~~~~~~~~~~~~e~~~~~~~vnl~~~~~~~~~~~~~m~~~~~G~IV~isS~~~  134 (252)
T d1zmta1          81 FAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKRKSGHIIFITSATP  134 (252)
T ss_dssp             CCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCSTT
T ss_pred             CCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhcccccceeeccccccc
Confidence            2  1  0                       2345555644  699999987664

>d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative carbonyl reductase sniffer
species: Caenorhabditis elegans [TaxId: 6239]

Probab=98.21  E-value=2.1e-06  Score=61.33  Aligned_cols=79  Identities=18%  Similarity=0.187  Sum_probs=55.7

Q ss_pred             CCEEEEecCCchHHHHHHHHHHHcCC--EEEEEeCCHHHHHHHHHhcCCC-e--eEecCCCccHH---HHHHhHCCC-Cc
Q 028523           19 GEYVFVSAASGAVGQLVGQFAKLVGC--YVVGSAGSKDKVDLLKNKFGFD-E--AFNYKEEPDLD---AALKRYFPE-GI   89 (208)
Q Consensus        19 g~~vli~ga~g~vG~~a~qla~~~g~--~v~~~~~s~~~~~~~~~~~g~~-~--v~~~~~~~~~~---~~~~~~~~~-~~   89 (208)
                      .++|||+||++|+|.+.++.+...|+  +|+.++|++++.+.+++..+.. .  .+|..+.+...   +.+.+..+. ++
T Consensus         3 ~KtilITGassGIG~a~a~~la~~G~~~~Vi~~~R~~~~~~~l~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~~~~~i   82 (250)
T d1yo6a1           3 PGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKSIKDSRVHVLPLTVTCDKSLDTFVSKVGEIVGSDGL   82 (250)
T ss_dssp             CSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHHHHTCCCTTEEEEECCTTCHHHHHHHHHHHHHHHGGGCC
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCCCEEEEEeCCHHHHHHHHHhhCCceEEEEEecCCHHHHHHHHHHHHHHhCCCCe
Confidence            47899999999999999888777785  7999999999888887333332 1  34555432233   333333333 69


Q ss_pred             cEEEeCCC
Q 028523           90 NIYFENVG   97 (208)
Q Consensus        90 d~v~d~~g   97 (208)
                      |+++++.|
T Consensus        83 dilinnAG   90 (250)
T d1yo6a1          83 SLLINNAG   90 (250)
T ss_dssp             CEEEECCC
T ss_pred             EEEEEcCc
Confidence            99999987

>d1jg1a_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=98.18  E-value=3.2e-06  Score=58.77  Aligned_cols=101  Identities=14%  Similarity=0.209  Sum_probs=70.5

Q ss_pred             HHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH---hcCCCeeEecCCCccHHHHHHhHCCC
Q 028523           11 FEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKN---KFGFDEAFNYKEEPDLDAALKRYFPE   87 (208)
Q Consensus        11 ~~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~---~~g~~~v~~~~~~~~~~~~~~~~~~~   87 (208)
                      .+..++++|++||..|  +|.|..++-+++..|.+|+.+...++-.+.+++   ++|.+.+.....  +..+..  ...+
T Consensus        71 l~~L~l~~g~~VLeIG--sGsGY~taila~l~g~~V~~ie~~~~l~~~a~~~l~~~g~~nv~~~~g--d~~~g~--~~~~  144 (215)
T d1jg1a_          71 LEIANLKPGMNILEVG--TGSGWNAALISEIVKTDVYTIERIPELVEFAKRNLERAGVKNVHVILG--DGSKGF--PPKA  144 (215)
T ss_dssp             HHHHTCCTTCCEEEEC--CTTSHHHHHHHHHHCSCEEEEESCHHHHHHHHHHHHHTTCCSEEEEES--CGGGCC--GGGC
T ss_pred             HHhhccCccceEEEec--CCCChhHHHHHHhhCceeEEEeccHHHHHHHHHHHHHcCCceeEEEEC--ccccCC--cccC
Confidence            3567899999999998  577999999999889889999988775544442   567654322221  111100  1112


Q ss_pred             CccEEEeCCCc-hhHHHHHHhhccCCEEEEE
Q 028523           88 GINIYFENVGG-KMLDAVLLNMRIQGRITLC  117 (208)
Q Consensus        88 ~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~  117 (208)
                      +||.|+.+.+- ..-...++.|++||+++..
T Consensus       145 pfD~Iiv~~a~~~ip~~l~~qL~~gGrLv~p  175 (215)
T d1jg1a_         145 PYDVIIVTAGAPKIPEPLIEQLKIGGKLIIP  175 (215)
T ss_dssp             CEEEEEECSBBSSCCHHHHHTEEEEEEEEEE
T ss_pred             cceeEEeecccccCCHHHHHhcCCCCEEEEE
Confidence            69999987773 4456788999999999874

>d1dl5a1 c.66.1.7 (A:1-213) Protein-L-isoaspartyl O-methyltransferase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Thermotoga maritima [TaxId: 2336]

Probab=98.15  E-value=5.6e-06  Score=57.56  Aligned_cols=102  Identities=18%  Similarity=0.231  Sum_probs=69.6

Q ss_pred             HHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC--EEEEEeCCHHHHHHHHHh---cCCCeeEecCCCccHHHHHHhH
Q 028523           10 FFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGC--YVVGSAGSKDKVDLLKNK---FGFDEAFNYKEEPDLDAALKRY   84 (208)
Q Consensus        10 l~~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g~--~v~~~~~s~~~~~~~~~~---~g~~~v~~~~~~~~~~~~~~~~   84 (208)
                      +.+...+++|++||-.|+  |.|..++.+++..|.  +|++++.+++..+.+++.   .+...+.....  +..+..  .
T Consensus        67 ~l~~l~l~~g~~VLdiG~--GtG~~s~~la~~~~~~g~V~~id~~~~~~~~a~~~~~~~~~~n~~~~~~--d~~~~~--~  140 (213)
T d1dl5a1          67 FMEWVGLDKGMRVLEIGG--GTGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERLGIENVIFVCG--DGYYGV--P  140 (213)
T ss_dssp             HHHHTTCCTTCEEEEECC--TTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHTTCCSEEEEES--CGGGCC--G
T ss_pred             HHHhhhccccceEEEecC--ccchhHHHHHHHhCCCCcEEEeecchhhHHHhhhhHhhhcccccccccC--chHHcc--c
Confidence            346678999999999994  458888899998864  899999999877777643   34432211111  111100  0


Q ss_pred             CCCCccEEEeCCCc-hhHHHHHHhhccCCEEEEE
Q 028523           85 FPEGINIYFENVGG-KMLDAVLLNMRIQGRITLC  117 (208)
Q Consensus        85 ~~~~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~  117 (208)
                      ..+.||.|+.+.+- ...+..++.|+|||+++..
T Consensus       141 ~~~~fD~I~~~~~~~~~p~~l~~~LkpGG~lv~p  174 (213)
T d1dl5a1         141 EFSPYDVIFVTVGVDEVPETWFTQLKEGGRVIVP  174 (213)
T ss_dssp             GGCCEEEEEECSBBSCCCHHHHHHEEEEEEEEEE
T ss_pred             cccchhhhhhhccHHHhHHHHHHhcCCCcEEEEE
Confidence            12269999987773 4457788999999999874

>d1nyta1 c.2.1.7 (A:102-271) Shikimate 5-dehydrogenase AroE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Escherichia coli [TaxId: 562]

Probab=98.14  E-value=1.8e-05  Score=52.91  Aligned_cols=83  Identities=11%  Similarity=0.111  Sum_probs=58.2

Q ss_pred             HHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHHHHhHCC
Q 028523            7 YAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFP   86 (208)
Q Consensus         7 ~~~l~~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~   86 (208)
                      ..+|.+..-..+|++|+|+|+ ||.+.+++..+...|++++++.|+.++.+.+.+.+.....+..-.. +      +...
T Consensus         6 ~~~l~~~~~~~~~k~vlIlGa-GGaarai~~al~~~g~~i~I~nRt~~ka~~l~~~~~~~~~~~~~~~-~------~~~~   77 (170)
T d1nyta1           6 LSDLERLSFIRPGLRILLIGA-GGASRGVLLPLLSLDCAVTITNRTVSRAEELAKLFAHTGSIQALSM-D------ELEG   77 (170)
T ss_dssp             HHHHHHHTCCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHTGGGSSEEECCS-G------GGTT
T ss_pred             HHHHHHcCCCCCCCEEEEECC-cHHHHHHHHHhcccceEEEeccchHHHHHHHHHHHhhccccccccc-c------cccc
Confidence            455655554568899999996 9999999988888999999999999988877655543211111111 1      1112


Q ss_pred             CCccEEEeCCC
Q 028523           87 EGINIYFENVG   97 (208)
Q Consensus        87 ~~~d~v~d~~g   97 (208)
                      ..+|++++|+.
T Consensus        78 ~~~dliIN~Tp   88 (170)
T d1nyta1          78 HEFDLIINATS   88 (170)
T ss_dssp             CCCSEEEECCS
T ss_pred             cccceeecccc
Confidence            26899999986

>d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Drosophila alcohol dehydrogenase
species: Fly (Drosophila lebanonensis) [TaxId: 7225]

Probab=98.09  E-value=1.3e-06  Score=62.61  Aligned_cols=105  Identities=14%  Similarity=0.070  Sum_probs=67.2

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH---HhcCCCe----eEecCCC-ccHHHHHHhHCC--C
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLK---NKFGFDE----AFNYKEE-PDLDAALKRYFP--E   87 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~---~~~g~~~----v~~~~~~-~~~~~~~~~~~~--~   87 (208)
                      +|+++||+||++|+|.+.+......|++|++++++.++.+.+.   +..+...    ..|.... ..+.+.+.+...  +
T Consensus         4 ~gK~vlITGgs~GIG~~~A~~la~~G~~vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~g   83 (254)
T d1sbya1           4 TNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAINPKVNITFHTYDVTVPVAESKKLLKKIFDQLK   83 (254)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSCCHHHHHHHHHHCTTSEEEEEECCTTSCHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEECCcccHHHHHHHHhhCCCCCEEEEEeecCCCHHHHHHHHHHHHHHcC
Confidence            5899999999999999999999899999998887766544333   1223222    2233211 123333333322  3


Q ss_pred             CccEEEeCCCc-h--h---------------HHHHHHhhc-----cCCEEEEEecccc
Q 028523           88 GINIYFENVGG-K--M---------------LDAVLLNMR-----IQGRITLCGMISQ  122 (208)
Q Consensus        88 ~~d~v~d~~g~-~--~---------------~~~~~~~l~-----~~G~~v~~g~~~~  122 (208)
                      ++|+++++.|. +  .               ...+++.|.     ++|+++.+++..+
T Consensus        84 ~iDilvnnAG~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~~~g~Ii~isS~~~  141 (254)
T d1sbya1          84 TVDILINGAGILDDHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSVTG  141 (254)
T ss_dssp             CCCEEEECCCCCCTTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGG
T ss_pred             CCCEEEeCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHhhhcccCCCceEEEEechhh
Confidence            69999999983 2  1               234455553     2588999887665

>d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=98.08  E-value=6.3e-07  Score=63.57  Aligned_cols=100  Identities=16%  Similarity=0.153  Sum_probs=67.1

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHHHHhHCC--CCccEEEeC
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFP--EGINIYFEN   95 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~--~~~d~v~d~   95 (208)
                      +|+++||+||++++|.+.++.+...|++|++++++++..+.+.     ....|..+.++..+.+.+...  +++|+++++
T Consensus         6 ~gK~~lITGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~-----~~~~Dv~~~~~v~~~~~~~~~~~g~iDiLVnn   80 (237)
T d1uzma1           6 VSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAPKGLF-----GVEVDVTDSDAVDRAFTAVEEHQGPVEVLVSN   80 (237)
T ss_dssp             CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSSCCCTTSE-----EEECCTTCHHHHHHHHHHHHHHHSSCSEEEEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCcchhcCce-----EEEEecCCHHHHHHHHHHHHHhcCCceEEEee
Confidence            6899999999999999999999999999999998876543221     123445544233333333322  269999998


Q ss_pred             CCc-hh-------------------------HHHHHHhhcc--CCEEEEEecccc
Q 028523           96 VGG-KM-------------------------LDAVLLNMRI--QGRITLCGMISQ  122 (208)
Q Consensus        96 ~g~-~~-------------------------~~~~~~~l~~--~G~~v~~g~~~~  122 (208)
                      .|. ..                         ...+++.|..  +|+++.++....
T Consensus        81 AG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~Iv~isS~~~  135 (237)
T d1uzma1          81 AGLSADAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNKFGRMIFIGSVSG  135 (237)
T ss_dssp             CSCCC-----CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCCC
T ss_pred             ecccccccHhhCCHHHHHHHHHhhhhhhhhhhhhhhhcccccCCCceEEEcchhh
Confidence            873 10                         2334445533  579999987654

>d1kpia_ c.66.1.18 (A:) CmaA2 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Mycolic acid cyclopropane synthase
domain: CmaA2
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=98.08  E-value=3e-05  Score=56.29  Aligned_cols=103  Identities=11%  Similarity=0.060  Sum_probs=70.9

Q ss_pred             HHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH---hcCCCeeEecCCCccHHHHHHhHC
Q 028523            9 GFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKN---KFGFDEAFNYKEEPDLDAALKRYF   85 (208)
Q Consensus         9 ~l~~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~---~~g~~~v~~~~~~~~~~~~~~~~~   85 (208)
                      -+.+.+++++|++||=+|  .|.|-.+..+|+..|++|++++.|+++.+++++   ..|....+..... ++     ...
T Consensus        52 ~~~~~l~l~~G~~VLDiG--CG~G~~~~~~a~~~g~~v~git~s~~q~~~a~~~~~~~~l~~~v~~~~~-d~-----~~~  123 (291)
T d1kpia_          52 LALDKLNLEPGMTLLDIG--CGWGSTMRHAVAEYDVNVIGLTLSENQYAHDKAMFDEVDSPRRKEVRIQ-GW-----EEF  123 (291)
T ss_dssp             HHHHTTCCCTTCEEEEET--CTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHSCCSSCEEEEEC-CG-----GGC
T ss_pred             HHHHhcCCCCCCEEEEec--CcchHHHHHHHHhcCcceeeccchHHHHHHHHHHHHhhccchhhhhhhh-cc-----ccc
Confidence            344667899999999998  356777889999999999999999998766553   3455432221111 22     122


Q ss_pred             CCCccEEEe-----CCCc-----------hhHHHHHHhhccCCEEEEEec
Q 028523           86 PEGINIYFE-----NVGG-----------KMLDAVLLNMRIQGRITLCGM  119 (208)
Q Consensus        86 ~~~~d~v~d-----~~g~-----------~~~~~~~~~l~~~G~~v~~g~  119 (208)
                      ++.||.|+.     .++.           ..+..+.+.|+|||+++.-..
T Consensus       124 ~~~fD~i~sie~~eH~~~~~~~~~~~~~~~~f~~i~~~LkpgG~~~l~~i  173 (291)
T d1kpia_         124 DEPVDRIVSLGAFEHFADGAGDAGFERYDTFFKKFYNLTPDDGRMLLHTI  173 (291)
T ss_dssp             CCCCSEEEEESCGGGTTCCSSCCSTTHHHHHHHHHHHTSCTTCEEEEEEE
T ss_pred             ccccceEeechhHHhcchhhhhhHHHHHHHHHHHHHHhCCCCCceEEEEE
Confidence            347998854     2331           257889999999999886543

>d1vbfa_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Sulfolobus tokodaii [TaxId: 111955]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Sulfolobus tokodaii [TaxId: 111955]

Probab=98.06  E-value=6e-06  Score=57.72  Aligned_cols=99  Identities=10%  Similarity=0.042  Sum_probs=67.2

Q ss_pred             HHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCC---eeEecCCCccHHHHHHhHCCC
Q 028523           11 FEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFD---EAFNYKEEPDLDAALKRYFPE   87 (208)
Q Consensus        11 ~~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~---~v~~~~~~~~~~~~~~~~~~~   87 (208)
                      .+...+++|++||-.|.  |.|..++.+++. +.+|+.+..+++-.+.+++.+...   .++. .   +......  ..+
T Consensus        63 l~~L~l~~g~~VLdIG~--GsGy~ta~La~l-~~~V~aiE~~~~~~~~A~~~~~~~~nv~~~~-~---d~~~g~~--~~~  133 (224)
T d1vbfa_          63 LDELDLHKGQKVLEIGT--GIGYYTALIAEI-VDKVVSVEINEKMYNYASKLLSYYNNIKLIL-G---DGTLGYE--EEK  133 (224)
T ss_dssp             HHHTTCCTTCEEEEECC--TTSHHHHHHHHH-SSEEEEEESCHHHHHHHHHHHTTCSSEEEEE-S---CGGGCCG--GGC
T ss_pred             HHHhhhcccceEEEecC--CCCHHHHHHHHH-hcccccccccHHHHHHHHHHHhccccccccc-C---chhhcch--hhh
Confidence            35678999999999984  567777777775 679999999999888877433321   1221 1   1111011  113


Q ss_pred             CccEEEeCCCc-hhHHHHHHhhccCCEEEEEe
Q 028523           88 GINIYFENVGG-KMLDAVLLNMRIQGRITLCG  118 (208)
Q Consensus        88 ~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g  118 (208)
                      +||.|+-+.+. ......++.|++||+++..-
T Consensus       134 pfD~Iiv~~a~~~ip~~l~~qLk~GGrLV~pv  165 (224)
T d1vbfa_         134 PYDRVVVWATAPTLLCKPYEQLKEGGIMILPI  165 (224)
T ss_dssp             CEEEEEESSBBSSCCHHHHHTEEEEEEEEEEE
T ss_pred             hHHHHHhhcchhhhhHHHHHhcCCCCEEEEEE
Confidence            69999876663 45567789999999998753

>d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.03  E-value=7.7e-06  Score=58.14  Aligned_cols=49  Identities=12%  Similarity=0.096  Sum_probs=44.3

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCC
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFD   66 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~   66 (208)
                      +|+.+||+||++++|.+.++.+...|++|+.+++++++.+.+.++++..
T Consensus         4 kGKvalITGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~   52 (248)
T d2o23a1           4 KGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKLGNN   52 (248)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSSHHHHHHHHCTT
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCC
Confidence            6899999999999999999999999999999999998888777677764

>d1kpga_ c.66.1.18 (A:) CmaA1 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Mycolic acid cyclopropane synthase
domain: CmaA1
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=98.01  E-value=4.2e-05  Score=55.35  Aligned_cols=103  Identities=12%  Similarity=0.059  Sum_probs=70.6

Q ss_pred             HHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH---hcCCCeeEecCCCccHHHHHHhHC
Q 028523            9 GFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKN---KFGFDEAFNYKEEPDLDAALKRYF   85 (208)
Q Consensus         9 ~l~~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~---~~g~~~v~~~~~~~~~~~~~~~~~   85 (208)
                      .+.+..++++|++||=+|  .|.|..++.+++..|++|++++.|+++.+++++   +.|...-+..... ++.     ..
T Consensus        53 ~~~~~l~l~~G~~VLDiG--CG~G~~a~~~a~~~g~~v~git~s~~Q~~~a~~~~~~~g~~~~v~~~~~-d~~-----~~  124 (285)
T d1kpga_          53 LALGKLGLQPGMTLLDVG--CGWGATMMRAVEKYDVNVVGLTLSKNQANHVQQLVANSENLRSKRVLLA-GWE-----QF  124 (285)
T ss_dssp             HHHTTTTCCTTCEEEEET--CTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHTCCCCSCEEEEES-CGG-----GC
T ss_pred             HHHHHcCCCCCCEEEEec--CcchHHHHHHHhcCCcceEEEeccHHHHHHHHHHHHhhhhhhhhHHHHh-hhh-----cc
Confidence            344567899999999998  477889999999999999999999998888764   2233221111111 221     12


Q ss_pred             CCCccEEEe-----CCCc----hhHHHHHHhhccCCEEEEEec
Q 028523           86 PEGINIYFE-----NVGG----KMLDAVLLNMRIQGRITLCGM  119 (208)
Q Consensus        86 ~~~~d~v~d-----~~g~----~~~~~~~~~l~~~G~~v~~g~  119 (208)
                      ++.+|.|+-     .++.    ..+..+.+.|+|||+++.-..
T Consensus       125 ~~~fD~i~si~~~eh~~~~~~~~~~~~~~r~LkpgG~~~l~~i  167 (285)
T d1kpga_         125 DEPVDRIVSIGAFEHFGHERYDAFFSLAHRLLPADGVMLLHTI  167 (285)
T ss_dssp             CCCCSEEEEESCGGGTCTTTHHHHHHHHHHHSCTTCEEEEEEE
T ss_pred             cccccceeeehhhhhcCchhHHHHHHHHHhhcCCCCcEEEEEE
Confidence            346887753     3332    257788999999999876443

>d1yb2a1 c.66.1.13 (A:6-255) Hypothetical protein Ta0852 {Thermoplasma acidophilum [TaxId: 2303]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: tRNA(1-methyladenosine) methyltransferase-like
domain: Hypothetical protein Ta0852
species: Thermoplasma acidophilum [TaxId: 2303]

Probab=98.00  E-value=1e-05  Score=57.46  Aligned_cols=101  Identities=7%  Similarity=0.022  Sum_probs=69.0

Q ss_pred             HhcCCCCCCEEEEecCCchHHHHHHHHHHHcC--CEEEEEeCCHHHHHHHHHhc---CCCeeEecCCCccHHHHHHhHCC
Q 028523           12 EVCSPKQGEYVFVSAASGAVGQLVGQFAKLVG--CYVVGSAGSKDKVDLLKNKF---GFDEAFNYKEEPDLDAALKRYFP   86 (208)
Q Consensus        12 ~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g--~~v~~~~~s~~~~~~~~~~~---g~~~v~~~~~~~~~~~~~~~~~~   86 (208)
                      ...++++|++||=.|+  |.|.++..+|+..|  .+|+.++.+++..+.+++.+   +...-+..... ++.+.   ...
T Consensus        79 ~~l~i~pG~rVLEiG~--GsG~lt~~la~~v~~~g~V~~vD~~e~~~~~A~~n~~~~~~~~nv~~~~~-Di~~~---~~~  152 (250)
T d1yb2a1          79 MRCGLRPGMDILEVGV--GSGNMSSYILYALNGKGTLTVVERDEDNLKKAMDNLSEFYDIGNVRTSRS-DIADF---ISD  152 (250)
T ss_dssp             --CCCCTTCEEEEECC--TTSHHHHHHHHHHTTSSEEEEECSCHHHHHHHHHHHHTTSCCTTEEEECS-CTTTC---CCS
T ss_pred             HHcCCCCcCEEEEeee--eCcHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHhcCCCceEEEEe-eeecc---ccc
Confidence            4578999999999884  45788888998875  48999999999888877533   22111122222 32221   112


Q ss_pred             CCccEEEeCCC--chhHHHHHHhhccCCEEEEEe
Q 028523           87 EGINIYFENVG--GKMLDAVLLNMRIQGRITLCG  118 (208)
Q Consensus        87 ~~~d~v~d~~g--~~~~~~~~~~l~~~G~~v~~g  118 (208)
                      +.||.|+--..  ...+..+.+.|+|||+++.+.
T Consensus       153 ~~fD~V~ld~p~p~~~l~~~~~~LKpGG~lv~~~  186 (250)
T d1yb2a1         153 QMYDAVIADIPDPWNHVQKIASMMKPGSVATFYL  186 (250)
T ss_dssp             CCEEEEEECCSCGGGSHHHHHHTEEEEEEEEEEE
T ss_pred             ceeeeeeecCCchHHHHHHHHHhcCCCceEEEEe
Confidence            37999885454  258899999999999998763

>d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Erythromycin synthase, eryAI, 1st ketoreductase module
species: Saccharopolyspora erythraea [TaxId: 1836]

Probab=98.00  E-value=2.5e-05  Score=55.76  Aligned_cols=82  Identities=17%  Similarity=0.212  Sum_probs=55.1

Q ss_pred             CCCCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCHHH-------HHHHHHhcCCCe---eEecCCCccHHHHHHh
Q 028523           15 SPKQGEYVFVSAASGAVGQLVGQFAKLVGC-YVVGSAGSKDK-------VDLLKNKFGFDE---AFNYKEEPDLDAALKR   83 (208)
Q Consensus        15 ~~~~g~~vli~ga~g~vG~~a~qla~~~g~-~v~~~~~s~~~-------~~~~~~~~g~~~---v~~~~~~~~~~~~~~~   83 (208)
                      .++++.++||+||++++|++.++.+...|+ +|+.+.|+..+       .+.++ ..|...   ..|..+.....+.+..
T Consensus         5 ~~~p~gt~lVTGgs~GIG~a~a~~la~~Ga~~vvl~~R~~~~~~~~~~~~~~l~-~~g~~v~~~~~Dv~d~~~~~~~~~~   83 (259)
T d2fr1a1           5 EWKPTGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELE-ALGARTTVAACDVTDRESVRELLGG   83 (259)
T ss_dssp             CCCCCSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHH-HTTCEEEEEECCTTCHHHHHHHHHT
T ss_pred             ccCCcCEEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCccCHHHHHHHHHHHH-hccccccccccccchHHHHHHhhcc
Confidence            478899999999999999999988888898 68888776432       22233 456532   2354444233333333


Q ss_pred             HCCC-CccEEEeCCC
Q 028523           84 YFPE-GINIYFENVG   97 (208)
Q Consensus        84 ~~~~-~~d~v~d~~g   97 (208)
                      .... ++|.++.+.|
T Consensus        84 i~~~~~i~~vv~~ag   98 (259)
T d2fr1a1          84 IGDDVPLSAVFHAAA   98 (259)
T ss_dssp             SCTTSCEEEEEECCC
T ss_pred             ccccccccccccccc
Confidence            3333 7899999887

>d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.99  E-value=1.8e-05  Score=57.42  Aligned_cols=103  Identities=17%  Similarity=0.230  Sum_probs=64.3

Q ss_pred             CEEEEecCCchHHHHHHHHHHHcCCEE---EEEeCCHHHHHHHH---HhcCC---C-e--eEecCCCccHHHHHHhHCCC
Q 028523           20 EYVFVSAASGAVGQLVGQFAKLVGCYV---VGSAGSKDKVDLLK---NKFGF---D-E--AFNYKEEPDLDAALKRYFPE   87 (208)
Q Consensus        20 ~~vli~ga~g~vG~~a~qla~~~g~~v---~~~~~s~~~~~~~~---~~~g~---~-~--v~~~~~~~~~~~~~~~~~~~   87 (208)
                      ..|||+||++|+|.+.++.+...|+++   +.+.++.+..+.+.   +++..   . .  .+|..+.++..+.+.+...+
T Consensus         3 kVvlITGassGIG~a~A~~la~~Ga~v~~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~g   82 (285)
T d1jtva_           3 TVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDSKSVAAARERVTEG   82 (285)
T ss_dssp             EEEEESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTTCHHHHHHHHHTCTTS
T ss_pred             CEEEEccCCCHHHHHHHHHHHHCCCCeEEEEEecCChhhhHHHHHHHHHHhccCCceEEEeccccchHhhhhhhhhcccc
Confidence            356899999999999998888888864   44455544333222   13322   1 1  34555543444445554445


Q ss_pred             CccEEEeCCCchh--------------------------HHHHHHhhcc--CCEEEEEecccc
Q 028523           88 GINIYFENVGGKM--------------------------LDAVLLNMRI--QGRITLCGMISQ  122 (208)
Q Consensus        88 ~~d~v~d~~g~~~--------------------------~~~~~~~l~~--~G~~v~~g~~~~  122 (208)
                      ++|+++++.|...                          .+.++..|..  +|+++.+++..+
T Consensus        83 ~idilvnnag~~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~m~~~~~G~Iv~isS~~g  145 (285)
T d1jtva_          83 RVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRGSGRVLVTGSVGG  145 (285)
T ss_dssp             CCSEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEGGG
T ss_pred             chhhhhhcccccccccccchhHhhhhhhhhcchhHHHHHHHHHHHHHHHcCCCceEEEechhh
Confidence            8999999886320                          2445566643  699999987765

>d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase sniffer
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=97.98  E-value=5.2e-06  Score=59.10  Aligned_cols=78  Identities=12%  Similarity=0.212  Sum_probs=52.2

Q ss_pred             CEEEEecCCchHHHHHHHHHH---HcCCEEEEEeCCHHHHHHHHH--hcCCC-e--eEecCCCccHHHHHHh---HCC-C
Q 028523           20 EYVFVSAASGAVGQLVGQFAK---LVGCYVVGSAGSKDKVDLLKN--KFGFD-E--AFNYKEEPDLDAALKR---YFP-E   87 (208)
Q Consensus        20 ~~vli~ga~g~vG~~a~qla~---~~g~~v~~~~~s~~~~~~~~~--~~g~~-~--v~~~~~~~~~~~~~~~---~~~-~   87 (208)
                      ++|||+||++|+|++.++.+.   ..|++|++++|++++.+.+++  +-+.. .  .+|..+.++..+.+..   ... +
T Consensus         3 KtilITGas~GIG~a~a~~l~~~a~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~~~~   82 (248)
T d1snya_           3 NSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELEDLAKNHSNIHILEIDLRNFDAYDKLVADIEGVTKDQ   82 (248)
T ss_dssp             SEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHHHHHHHHHCTTEEEEECCTTCGGGHHHHHHHHHHHHGGG
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHhcCCcEEEEEEEeccHHHHHHHHhhhHHHhhcC
Confidence            579999999999999876553   358899999999887665542  11221 1  3455554344444333   223 3


Q ss_pred             CccEEEeCCC
Q 028523           88 GINIYFENVG   97 (208)
Q Consensus        88 ~~d~v~d~~g   97 (208)
                      ++|+++++.|
T Consensus        83 ~iDiLvnNAg   92 (248)
T d1snya_          83 GLNVLFNNAG   92 (248)
T ss_dssp             CCSEEEECCC
T ss_pred             CcceEEeecc
Confidence            7999999876

>d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Biliverdin IX beta reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.98  E-value=3.4e-06  Score=58.23  Aligned_cols=96  Identities=10%  Similarity=0.077  Sum_probs=62.5

Q ss_pred             CCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCe-eEecCCCccHHHHHHhHCCCCccEEEeCCC
Q 028523           19 GEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDE-AFNYKEEPDLDAALKRYFPEGINIYFENVG   97 (208)
Q Consensus        19 g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~-v~~~~~~~~~~~~~~~~~~~~~d~v~d~~g   97 (208)
                      .++|+|+||+|.+|...++.+...|.+|.+++|++++.+... ..+... ..|..+.   . .+.+... ++|+||.++|
T Consensus         3 ~kkIlV~GatG~iG~~v~~~Ll~~g~~V~~~~R~~~~~~~~~-~~~~~~~~gD~~d~---~-~l~~al~-~~d~vi~~~g   76 (205)
T d1hdoa_           3 VKKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSEG-PRPAHVVVGDVLQA---A-DVDKTVA-GQDAVIVLLG   76 (205)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGGSCSSS-CCCSEEEESCTTSH---H-HHHHHHT-TCSEEEECCC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCcCEEEEEEcChhhccccc-ccccccccccccch---h-hHHHHhc-CCCEEEEEec
Confidence            468999999999999999988888999999999988765333 233322 2233332   2 2222222 4899999987


Q ss_pred             ch-----------hHHHHHHhhccC--CEEEEEecc
Q 028523           98 GK-----------MLDAVLLNMRIQ--GRITLCGMI  120 (208)
Q Consensus        98 ~~-----------~~~~~~~~l~~~--G~~v~~g~~  120 (208)
                      ..           .....++.++..  .+++.++..
T Consensus        77 ~~~~~~~~~~~~~~~~~l~~aa~~~~v~r~i~~ss~  112 (205)
T d1hdoa_          77 TRNDLSPTTVMSEGARNIVAAMKAHGVDKVVACTSA  112 (205)
T ss_dssp             CTTCCSCCCHHHHHHHHHHHHHHHHTCCEEEEECCG
T ss_pred             cCCchhhhhhhHHHHHHHHHHHHhcCCCeEEEEeee
Confidence            42           122344455443  478877654

>d1nkva_ c.66.1.21 (A:) Hypothetical Protein YjhP {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Hypothetical Protein YjhP
domain: Hypothetical Protein YjhP
species: Escherichia coli [TaxId: 562]

Probab=97.92  E-value=1.3e-05  Score=56.74  Aligned_cols=106  Identities=15%  Similarity=0.127  Sum_probs=71.9

Q ss_pred             HHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH---hcCCCeeEecCCCccHHHHHHh
Q 028523            7 YAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKN---KFGFDEAFNYKEEPDLDAALKR   83 (208)
Q Consensus         7 ~~~l~~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~---~~g~~~v~~~~~~~~~~~~~~~   83 (208)
                      +..|....++++|++||=.|.  |.|..+..+++..|++|++++.|++..+.+++   ..|...-+..... ++.+.   
T Consensus        22 ~~~l~~~~~l~pg~~VLDiGC--G~G~~~~~la~~~~~~v~GvD~s~~~~~~ar~~~~~~gl~~~v~~~~~-d~~~~---   95 (245)
T d1nkva_          22 YATLGRVLRMKPGTRILDLGS--GSGEMLCTWARDHGITGTGIDMSSLFTAQAKRRAEELGVSERVHFIHN-DAAGY---   95 (245)
T ss_dssp             HHHHHHHTCCCTTCEEEEETC--TTCHHHHHHHHHTCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEES-CCTTC---
T ss_pred             HHHHHHHcCCCCCCEEEEEcC--CCCHHHHHHHHhcCCEEEEEecccchhhHHHHHHHHhhccccchhhhh-HHhhc---
Confidence            455777889999999998884  55667778888889999999999988776653   3454321111111 22111   


Q ss_pred             HCCCCccEEEeCCC-------chhHHHHHHhhccCCEEEEEe
Q 028523           84 YFPEGINIYFENVG-------GKMLDAVLLNMRIQGRITLCG  118 (208)
Q Consensus        84 ~~~~~~d~v~d~~g-------~~~~~~~~~~l~~~G~~v~~g  118 (208)
                      ..++.||.|+..-.       ...+..+.+.|+|||+++...
T Consensus        96 ~~~~~fD~v~~~~~~~~~~d~~~~l~~~~r~LkPGG~l~i~~  137 (245)
T d1nkva_          96 VANEKCDVAACVGATWIAGGFAGAEELLAQSLKPGGIMLIGE  137 (245)
T ss_dssp             CCSSCEEEEEEESCGGGTSSSHHHHHHHTTSEEEEEEEEEEE
T ss_pred             cccCceeEEEEEehhhccCCHHHHHHHHHHHcCcCcEEEEEe
Confidence            12337999875321       236788899999999987753

>d1o54a_ c.66.1.13 (A:) Hypothetical protein TM0748 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: tRNA(1-methyladenosine) methyltransferase-like
domain: Hypothetical protein TM0748
species: Thermotoga maritima [TaxId: 2336]

Probab=97.90  E-value=8.5e-05  Score=53.14  Aligned_cols=102  Identities=20%  Similarity=0.309  Sum_probs=72.2

Q ss_pred             HHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcC--CEEEEEeCCHHHHHHHHH---hcCCCeeEecCCCccHHHHHHhH
Q 028523           10 FFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVG--CYVVGSAGSKDKVDLLKN---KFGFDEAFNYKEEPDLDAALKRY   84 (208)
Q Consensus        10 l~~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g--~~v~~~~~s~~~~~~~~~---~~g~~~v~~~~~~~~~~~~~~~~   84 (208)
                      +...+++++|++||=.|+  |.|..+..+|+..|  .+|+.++.+++..+.+++   .+|....+..... +.    ...
T Consensus        95 Ii~~l~i~pG~~VLDiG~--GsG~lt~~lA~~~~~~G~V~~vD~~~~~~~~A~~~~~~~g~~~~v~~~~~-d~----~~~  167 (266)
T d1o54a_          95 IAMMLDVKEGDRIIDTGV--GSGAMCAVLARAVGSSGKVFAYEKREEFAKLAESNLTKWGLIERVTIKVR-DI----SEG  167 (266)
T ss_dssp             HHHHTTCCTTCEEEEECC--TTSHHHHHHHHHTTTTCEEEEECCCHHHHHHHHHHHHHTTCGGGEEEECC-CG----GGC
T ss_pred             HHHhhCCCCCCEEEECCC--CCCHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhccccCcEEEec-cc----ccc
Confidence            345688999999999884  45888889999875  599999999998877764   3454322222222 22    111


Q ss_pred             CCC-CccEEEeCCCc--hhHHHHHHhhccCCEEEEEe
Q 028523           85 FPE-GINIYFENVGG--KMLDAVLLNMRIQGRITLCG  118 (208)
Q Consensus        85 ~~~-~~d~v~d~~g~--~~~~~~~~~l~~~G~~v~~g  118 (208)
                      .+. .+|.|+--...  ..+..+.+.|+|||+++.+.
T Consensus       168 ~~~~~~D~V~~d~p~p~~~l~~~~~~LKpGG~lv~~~  204 (266)
T d1o54a_         168 FDEKDVDALFLDVPDPWNYIDKCWEALKGGGRFATVC  204 (266)
T ss_dssp             CSCCSEEEEEECCSCGGGTHHHHHHHEEEEEEEEEEE
T ss_pred             ccccceeeeEecCCCHHHHHHHHHhhcCCCCEEEEEe
Confidence            222 68888766663  57899999999999998763

>d2fk8a1 c.66.1.18 (A:22-301) Methoxy mycolic acid synthase 4, Mma4 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Mycolic acid cyclopropane synthase
domain: Methoxy mycolic acid synthase 4, Mma4
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=97.89  E-value=5e-05  Score=54.82  Aligned_cols=103  Identities=14%  Similarity=0.147  Sum_probs=69.1

Q ss_pred             HHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHh---cCCCeeEecCCCccHHHHHHhH
Q 028523            8 AGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNK---FGFDEAFNYKEEPDLDAALKRY   84 (208)
Q Consensus         8 ~~l~~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~---~g~~~v~~~~~~~~~~~~~~~~   84 (208)
                      ..+.+..++++|++||=+|.  |.|..+..+++..|++|++++.|++..+++++.   .|....+..... ++.    + 
T Consensus        42 ~~~~~~l~l~~g~~VLDiGC--G~G~~a~~~a~~~g~~v~gi~ls~~q~~~a~~~~~~~~l~~~~~~~~~-d~~----~-  113 (280)
T d2fk8a1          42 DLNLDKLDLKPGMTLLDIGC--GWGTTMRRAVERFDVNVIGLTLSKNQHARCEQVLASIDTNRSRQVLLQ-GWE----D-  113 (280)
T ss_dssp             HHHHTTSCCCTTCEEEEESC--TTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEES-CGG----G-
T ss_pred             HHHHHHcCCCCCCEEEEecC--CchHHHHHHHHhCceeEEEecchHHHHHHHHHHHHhhccccchhhhhh-hhh----h-
Confidence            33445568999999999984  455667888889999999999999998877642   343221111111 211    1 


Q ss_pred             CCCCccEEEe-----CCCc----hhHHHHHHhhccCCEEEEEe
Q 028523           85 FPEGINIYFE-----NVGG----KMLDAVLLNMRIQGRITLCG  118 (208)
Q Consensus        85 ~~~~~d~v~d-----~~g~----~~~~~~~~~l~~~G~~v~~g  118 (208)
                      .++.+|.|+-     .++.    ..+..+.+.|+|||+++.-.
T Consensus       114 ~~~~fD~i~si~~~eh~~~~~~~~~f~~i~~~LkpgG~~~i~~  156 (280)
T d2fk8a1         114 FAEPVDRIVSIEAFEHFGHENYDDFFKRCFNIMPADGRMTVQS  156 (280)
T ss_dssp             CCCCCSEEEEESCGGGTCGGGHHHHHHHHHHHSCTTCEEEEEE
T ss_pred             hccchhhhhHhhHHHHhhhhhHHHHHHHHHhccCCCceEEEEE
Confidence            2346888853     3332    24788899999999997643

>d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Helicobacter pylori [TaxId: 210]

Probab=97.81  E-value=3.2e-05  Score=55.62  Aligned_cols=81  Identities=6%  Similarity=0.046  Sum_probs=52.5

Q ss_pred             CCCCEEEEecCCc--hHHHHHHHHHHHcCCEEEEEeCCHHHHHHH---HHhcCCCee--EecCCCccHHHHHHhHC--CC
Q 028523           17 KQGEYVFVSAASG--AVGQLVGQFAKLVGCYVVGSAGSKDKVDLL---KNKFGFDEA--FNYKEEPDLDAALKRYF--PE   87 (208)
Q Consensus        17 ~~g~~vli~ga~g--~vG~~a~qla~~~g~~v~~~~~s~~~~~~~---~~~~g~~~v--~~~~~~~~~~~~~~~~~--~~   87 (208)
                      -+|+++||+||+|  ++|.+.++.+...|++|+.+.++++..+.+   .++.+...+  .|..+..+..+.+.+..  -+
T Consensus         3 L~gK~alITGaag~~GIG~AiA~~la~~Ga~V~i~~r~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~g   82 (274)
T d2pd4a1           3 LKGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNESLEKRVRPIAQELNSPYVYELDVSKEEHFKSLYNSVKKDLG   82 (274)
T ss_dssp             TTTCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHTS
T ss_pred             CCCCEEEEECCCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhhCCceeEeeecccchhhHHHHHHHHHHHcC
Confidence            3689999999876  899999999999999999999886533333   312232222  23333212333333222  23


Q ss_pred             CccEEEeCCC
Q 028523           88 GINIYFENVG   97 (208)
Q Consensus        88 ~~d~v~d~~g   97 (208)
                      ++|+++.+.|
T Consensus        83 ~id~lV~nag   92 (274)
T d2pd4a1          83 SLDFIVHSVA   92 (274)
T ss_dssp             CEEEEEECCC
T ss_pred             CCCeEEeecc
Confidence            6999998876

>d1i1na_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.75  E-value=7.5e-05  Score=52.06  Aligned_cols=96  Identities=19%  Similarity=0.174  Sum_probs=65.4

Q ss_pred             CCCCCCEEEEecCCchHHHHHHHHHHHcC--CEEEEEeCCHHHHHHHHHhc---CC-----Cee-EecCCCccHHHHHHh
Q 028523           15 SPKQGEYVFVSAASGAVGQLVGQFAKLVG--CYVVGSAGSKDKVDLLKNKF---GF-----DEA-FNYKEEPDLDAALKR   83 (208)
Q Consensus        15 ~~~~g~~vli~ga~g~vG~~a~qla~~~g--~~v~~~~~s~~~~~~~~~~~---g~-----~~v-~~~~~~~~~~~~~~~   83 (208)
                      .+++|++||-.|  .|.|..++-+++..|  .+|+.++.+++-.+.+++.+   +.     ..+ +-..   +.....  
T Consensus        73 ~l~~g~~VLdiG--~GsGy~ta~la~l~~~~g~V~~ie~~~~l~~~a~~~l~~~~~~~~~~~~~~~~~g---D~~~~~--  145 (224)
T d1i1na_          73 QLHEGAKALDVG--SGSGILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQLVVG---DGRMGY--  145 (224)
T ss_dssp             TSCTTCEEEEET--CTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCTHHHHTSSEEEEES---CGGGCC--
T ss_pred             ccCCCCeEEEec--CCCCHHHHHHHHHhCCCceEEEEcCCHHHHHHHHHhccccCcccccccceEEEEe---eccccc--
Confidence            789999999998  467888899999876  39999999988776665322   22     111 1111   110000  


Q ss_pred             HCCCCccEEEeCCC-chhHHHHHHhhccCCEEEEE
Q 028523           84 YFPEGINIYFENVG-GKMLDAVLLNMRIQGRITLC  117 (208)
Q Consensus        84 ~~~~~~d~v~d~~g-~~~~~~~~~~l~~~G~~v~~  117 (208)
                      ...+.||.|+.+.. .......++.|++||+++..
T Consensus       146 ~~~~~fD~I~~~~~~~~ip~~l~~~LkpGG~LV~p  180 (224)
T d1i1na_         146 AEEAPYDAIHVGAAAPVVPQALIDQLKPGGRLILP  180 (224)
T ss_dssp             GGGCCEEEEEECSBBSSCCHHHHHTEEEEEEEEEE
T ss_pred             chhhhhhhhhhhcchhhcCHHHHhhcCCCcEEEEE
Confidence            01126999998777 45567889999999999874

>d1lssa_ c.2.1.9 (A:) Ktn Mja218 {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn Mja218
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=97.74  E-value=0.00045  Score=43.70  Aligned_cols=76  Identities=17%  Similarity=0.125  Sum_probs=55.9

Q ss_pred             EEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHHHHhHCCCCccEEEeCCCchh
Q 028523           21 YVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVGGKM  100 (208)
Q Consensus        21 ~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~  100 (208)
                      +|+|.|+ |.+|...++.+...|..|++++.++++.+.+.++++.. ++..+.  .-.+.+++..-..+|.++-+++.+.
T Consensus         2 ~IvI~G~-G~~G~~la~~L~~~g~~v~vid~d~~~~~~~~~~~~~~-vi~Gd~--~~~~~l~~~~i~~a~~vv~~t~~d~   77 (132)
T d1lssa_           2 YIIIAGI-GRVGYTLAKSLSEKGHDIVLIDIDKDICKKASAEIDAL-VINGDC--TKIKTLEDAGIEDADMYIAVTGKEE   77 (132)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCSSE-EEESCT--TSHHHHHHTTTTTCSEEEECCSCHH
T ss_pred             EEEEECC-CHHHHHHHHHHHHCCCCcceecCChhhhhhhhhhhhhh-hccCcc--cchhhhhhcChhhhhhhcccCCcHH
Confidence            5889996 99999999999999999999999999999887567654 332221  2223344433336899999888653

>d1e5qa1 c.2.1.3 (A:2-124,A:392-450) Saccharopine reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Saccharopine reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=97.72  E-value=0.00059  Score=45.23  Aligned_cols=96  Identities=11%  Similarity=0.056  Sum_probs=63.3

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHHHHhHCCCCccEEEeCCC
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVG   97 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~d~v~d~~g   97 (208)
                      ++++|+|.|+ |.+|..+++.+...|.+|+++.++.++.+.+.+.++...+. .... ........... ..|.++.+..
T Consensus         1 ~~K~IliiGa-G~~G~~~a~~L~~~g~~V~v~dr~~~~a~~l~~~~~~~~~~-~~~~-~~~~~~~~~i~-~~~~~i~~~~   76 (182)
T d1e5qa1           1 ATKSVLMLGS-GFVTRPTLDVLTDSGIKVTVACRTLESAKKLSAGVQHSTPI-SLDV-NDDAALDAEVA-KHDLVISLIP   76 (182)
T ss_dssp             CCCEEEEECC-STTHHHHHHHHHTTTCEEEEEESCHHHHHHHHTTCTTEEEE-ECCT-TCHHHHHHHHT-TSSEEEECSC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEECChHHHHHHHhcccccccc-cccc-cchhhhHhhhh-ccceeEeecc
Confidence            3678999996 99999999988888999999999999999888555543332 2221 11111111111 3688888777


Q ss_pred             ch-hHHHHHHhhccCCEEEEE
Q 028523           98 GK-MLDAVLLNMRIQGRITLC  117 (208)
Q Consensus        98 ~~-~~~~~~~~l~~~G~~v~~  117 (208)
                      .. .......++..+-.++..
T Consensus        77 ~~~~~~~~~~~~~~~~~~~~~   97 (182)
T d1e5qa1          77 YTFHATVIKSAIRQKKHVVTT   97 (182)
T ss_dssp             GGGHHHHHHHHHHHTCEEECS
T ss_pred             chhhhHHHHHHHhhccceeec
Confidence            53 444455555666666554

>d2b25a1 c.66.1.13 (A:6-329) Hypothetical protein FLJ20628 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: tRNA(1-methyladenosine) methyltransferase-like
domain: Hypothetical protein FLJ20628
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.71  E-value=5e-05  Score=55.88  Aligned_cols=105  Identities=16%  Similarity=0.206  Sum_probs=67.7

Q ss_pred             HHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC--EEEEEeCCHHHHHHHHHhcC--------------CCeeEecCC
Q 028523           10 FFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGC--YVVGSAGSKDKVDLLKNKFG--------------FDEAFNYKE   73 (208)
Q Consensus        10 l~~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g~--~v~~~~~s~~~~~~~~~~~g--------------~~~v~~~~~   73 (208)
                      +....++++|++||=.|  .|.|.+++.+|+..|.  +|+.++.+++..+.+++.+.              .+.+ +...
T Consensus        90 Il~~l~i~pG~rVLE~G--tGsG~lt~~LAr~vg~~G~V~t~E~~~~~~~~A~~n~~~~~~~~~~~~~~~~~~nv-~~~~  166 (324)
T d2b25a1          90 ILSMMDINPGDTVLEAG--SGSGGMSLFLSKAVGSQGRVISFEVRKDHHDLAKKNYKHWRDSWKLSHVEEWPDNV-DFIH  166 (324)
T ss_dssp             HHHHHTCCTTCEEEEEC--CTTSHHHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHHHHHHHHTTTCSSCCCCCE-EEEE
T ss_pred             HHHHhCCCCCCEEEEec--ccccHHHHHHHHHhCCCcEEEEecCCHHHHHHHHHHHHHhhhhhhhhhhhccccce-eEEe
Confidence            33567899999998887  3569999999999875  89999999998877764221              0111 1111


Q ss_pred             CccHHHHHHhHCCCCccEEEeCCCc--hhHHHHHHhhccCCEEEEEe
Q 028523           74 EPDLDAALKRYFPEGINIYFENVGG--KMLDAVLLNMRIQGRITLCG  118 (208)
Q Consensus        74 ~~~~~~~~~~~~~~~~d~v~d~~g~--~~~~~~~~~l~~~G~~v~~g  118 (208)
                      . ++.+.........||.||--...  ..+..+.+.|+|||+++.+.
T Consensus       167 ~-di~~~~~~~~~~~fD~V~LD~p~P~~~l~~~~~~LKpGG~lv~~~  212 (324)
T d2b25a1         167 K-DISGATEDIKSLTFDAVALDMLNPHVTLPVFYPHLKHGGVCAVYV  212 (324)
T ss_dssp             S-CTTCCC-------EEEEEECSSSTTTTHHHHGGGEEEEEEEEEEE
T ss_pred             c-chhhcccccCCCCcceEeecCcCHHHHHHHHHHhccCCCEEEEEe
Confidence            1 11111111112258888754443  57899999999999998864

>d1vi2a1 c.2.1.7 (A:107-288) Putative shikimate dehydrogenase YdiB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Putative shikimate dehydrogenase YdiB
species: Escherichia coli [TaxId: 562]

Probab=97.69  E-value=0.00021  Score=48.07  Aligned_cols=106  Identities=13%  Similarity=0.084  Sum_probs=63.5

Q ss_pred             HHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHH---hc----CC-CeeEecCCCccH
Q 028523            7 YAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGC-YVVGSAGSKDKVDLLKN---KF----GF-DEAFNYKEEPDL   77 (208)
Q Consensus         7 ~~~l~~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g~-~v~~~~~s~~~~~~~~~---~~----g~-~~v~~~~~~~~~   77 (208)
                      .++|.+..---++.+|+|+|+ |+.|.+++..+...|+ +++++.|++++.+.+.+   ++    +. ..+.+..+...+
T Consensus         6 ~~~l~~~~~~l~~k~vlIlGa-GGaarai~~al~~~g~~~i~i~nR~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~   84 (182)
T d1vi2a1           6 IRAIKESGFDIKGKTMVLLGA-GGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVNENTDCVVTVTDLADQQAF   84 (182)
T ss_dssp             HHHHHHTTCCCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHSSCEEEEEETTCHHHH
T ss_pred             HHHHHHcCCCcCCCEEEEECC-cHHHHHHHHHHhhcCCceEeeeccchHHHHHHHHHHHHHHhhcCcceEeeecccccch
Confidence            345544433347789999995 9999999888888898 88888888765543321   22    22 123444432122


Q ss_pred             HHHHHhHCCCCccEEEeCCCchh-------HHHHHHhhccCCEEEEEe
Q 028523           78 DAALKRYFPEGINIYFENVGGKM-------LDAVLLNMRIQGRITLCG  118 (208)
Q Consensus        78 ~~~~~~~~~~~~d~v~d~~g~~~-------~~~~~~~l~~~G~~v~~g  118 (208)
                      .+.+.     .+|++|+|++-..       ...-+..++++..++.+-
T Consensus        85 ~~~~~-----~~diiIN~Tp~G~~~~~~~~~~~~~~~~~~~~~v~Di~  127 (182)
T d1vi2a1          85 AEALA-----SADILTNGTKVGMKPLENESLVNDISLLHPGLLVTECV  127 (182)
T ss_dssp             HHHHH-----TCSEEEECSSTTSTTSCSCCSCCCGGGSCTTCEEEECC
T ss_pred             hhhhc-----ccceeccccCCccccccchhhhhHHHhhhcchhhHHhh
Confidence            22222     4899999987211       111134566777776653

>d1xxla_ c.66.1.41 (A:) Hypothetical protein YcgJ {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: UbiE/COQ5-like
domain: Hypothetical protein YcgJ
species: Bacillus subtilis [TaxId: 1423]

Probab=97.69  E-value=2.5e-05  Score=54.88  Aligned_cols=105  Identities=13%  Similarity=0.199  Sum_probs=69.5

Q ss_pred             HHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHh---cCCCeeEecCCCccHHHHHHh
Q 028523            7 YAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNK---FGFDEAFNYKEEPDLDAALKR   83 (208)
Q Consensus         7 ~~~l~~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~---~g~~~v~~~~~~~~~~~~~~~   83 (208)
                      +..|.+.+++++|++||=.|+  |.|..+..+++. +.+|++++.|+.-.+.+++.   .|.+.+ ..... +..+  ..
T Consensus         5 ~~~l~~~~~~~~~~rILDiGc--GtG~~~~~la~~-~~~v~gvD~S~~~l~~A~~~~~~~~~~~~-~~~~~-d~~~--~~   77 (234)
T d1xxla_           5 LGLMIKTAECRAEHRVLDIGA--GAGHTALAFSPY-VQECIGVDATKEMVEVASSFAQEKGVENV-RFQQG-TAES--LP   77 (234)
T ss_dssp             HHHHHHHHTCCTTCEEEEESC--TTSHHHHHHGGG-SSEEEEEESCHHHHHHHHHHHHHHTCCSE-EEEEC-BTTB--CC
T ss_pred             HHHHHHHhCCCCCCEEEEeCC--cCcHHHHHHHHh-CCeEEEEeCChhhhhhhhhhhcccccccc-ccccc-cccc--cc
Confidence            445668889999999999984  557777777764 68999999999877766532   333221 11111 1110  01


Q ss_pred             HCCCCccEEEeCCC-------chhHHHHHHhhccCCEEEEEe
Q 028523           84 YFPEGINIYFENVG-------GKMLDAVLLNMRIQGRITLCG  118 (208)
Q Consensus        84 ~~~~~~d~v~d~~g-------~~~~~~~~~~l~~~G~~v~~g  118 (208)
                      +.++.||+|+.+..       ...+..+.+.|+|||.++...
T Consensus        78 ~~~~~fD~v~~~~~l~~~~d~~~~l~~~~r~LkpgG~~~~~~  119 (234)
T d1xxla_          78 FPDDSFDIITCRYAAHHFSDVRKAVREVARVLKQDGRFLLVD  119 (234)
T ss_dssp             SCTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred             ccccccceeeeeceeecccCHHHHHHHHHHeeCCCcEEEEEE
Confidence            12336999986433       135888999999999987753

>d1li4a1 c.2.1.4 (A:190-352) S-adenosylhomocystein hydrolase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: S-adenosylhomocystein hydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.69  E-value=0.00044  Score=45.20  Aligned_cols=101  Identities=19%  Similarity=0.178  Sum_probs=72.7

Q ss_pred             hHHHHHHHhcC-CCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHHHHh
Q 028523            5 TAYAGFFEVCS-PKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKR   83 (208)
Q Consensus         5 tA~~~l~~~~~-~~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~   83 (208)
                      +.+.++.+... .-.|++++|.| .|-+|...++.++.+|++|+++...+.+.-.+. --|. .+.      .+.+.+. 
T Consensus         9 S~~~~~~r~t~~~l~Gk~v~V~G-yG~iG~g~A~~~rg~G~~V~v~e~dp~~al~A~-~dG~-~v~------~~~~a~~-   78 (163)
T d1li4a1           9 SLIDGIKRATDVMIAGKVAVVAG-YGDVGKGCAQALRGFGARVIITEIDPINALQAA-MEGY-EVT------TMDEACQ-   78 (163)
T ss_dssp             HHHHHHHHHHCCCCTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHH-HTTC-EEC------CHHHHTT-
T ss_pred             hHHHHHHHHhCceecCCEEEEec-cccccHHHHHHHHhCCCeeEeeecccchhHHhh-cCce-Eee------ehhhhhh-
Confidence            44556655444 45899999999 699999999999999999999998886644443 3343 221      3333322 


Q ss_pred             HCCCCccEEEeCCCch--hHHHHHHhhccCCEEEEEec
Q 028523           84 YFPEGINIYFENVGGK--MLDAVLLNMRIQGRITLCGM  119 (208)
Q Consensus        84 ~~~~~~d~v~d~~g~~--~~~~~~~~l~~~G~~v~~g~  119 (208)
                          ..|+++-++|..  .-.+.++.|+++-.+...|-
T Consensus        79 ----~adivvtaTGn~~vI~~eh~~~MKdgaIL~N~Gh  112 (163)
T d1li4a1          79 ----EGNIFVTTTGCIDIILGRHFEQMKDDAIVCNIGH  112 (163)
T ss_dssp             ----TCSEEEECSSCSCSBCHHHHTTCCTTEEEEECSS
T ss_pred             ----hccEEEecCCCccchhHHHHHhccCCeEEEEecc
Confidence                379999999963  45678888988877777665

>d1l3ia_ c.66.1.22 (A:) Precorrin-6Y methyltransferase (CbiT) {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Precorrin-6Y methyltransferase (CbiT)
domain: Precorrin-6Y methyltransferase (CbiT)
species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]

Probab=97.67  E-value=0.00019  Score=48.41  Aligned_cols=101  Identities=16%  Similarity=0.190  Sum_probs=66.5

Q ss_pred             HhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH---hcCCCeeEecCCCccHHHHHHhHCCCC
Q 028523           12 EVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKN---KFGFDEAFNYKEEPDLDAALKRYFPEG   88 (208)
Q Consensus        12 ~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~---~~g~~~v~~~~~~~~~~~~~~~~~~~~   88 (208)
                      ...++++|++||=.|+  |.|..++.+++. +.+|++++.+++..+.+++   ++|...-+..... +..+...  ....
T Consensus        27 ~~l~~~~g~~VLDiGc--GsG~~s~~lA~~-~~~V~avD~~~~~l~~a~~n~~~~gl~~~v~~~~g-da~~~~~--~~~~  100 (186)
T d1l3ia_          27 CLAEPGKNDVAVDVGC--GTGGVTLELAGR-VRRVYAIDRNPEAISTTEMNLQRHGLGDNVTLMEG-DAPEALC--KIPD  100 (186)
T ss_dssp             HHHCCCTTCEEEEESC--TTSHHHHHHHTT-SSEEEEEESCHHHHHHHHHHHHHTTCCTTEEEEES-CHHHHHT--TSCC
T ss_pred             HhcCCCCCCEEEEEEC--CeEccccccccc-ceEEEEecCCHHHHHHHHHHHHHcCCCcceEEEEC-chhhccc--ccCC
Confidence            4568999999998874  446666667664 5699999999998777764   3555311111122 4333322  1237


Q ss_pred             ccEEEeCCCc----hhHHHHHHhhccCCEEEEEe
Q 028523           89 INIYFENVGG----KMLDAVLLNMRIQGRITLCG  118 (208)
Q Consensus        89 ~d~v~d~~g~----~~~~~~~~~l~~~G~~v~~g  118 (208)
                      +|.|+...+.    +.++.+.+.|+|+|+++...
T Consensus       101 ~D~v~~~~~~~~~~~~~~~~~~~LkpgG~lvi~~  134 (186)
T d1l3ia_         101 IDIAVVGGSGGELQEILRIIKDKLKPGGRIIVTA  134 (186)
T ss_dssp             EEEEEESCCTTCHHHHHHHHHHTEEEEEEEEEEE
T ss_pred             cCEEEEeCccccchHHHHHHHHHhCcCCEEEEEe
Confidence            9999865442    35778889999999988654

>d2o57a1 c.66.1.18 (A:16-297) Putative sarcosine dimethylglycine methyltransferase {Red algae (Galdieria sulphuraria) [TaxId: 130081]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Mycolic acid cyclopropane synthase
domain: Putative sarcosine dimethylglycine methyltransferase
species: Red algae (Galdieria sulphuraria) [TaxId: 130081]

Probab=97.66  E-value=7.9e-05  Score=53.75  Aligned_cols=103  Identities=6%  Similarity=0.001  Sum_probs=69.0

Q ss_pred             HHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH---hcCCCe---eEecCCCccHHHHHHh
Q 028523           10 FFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKN---KFGFDE---AFNYKEEPDLDAALKR   83 (208)
Q Consensus        10 l~~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~---~~g~~~---v~~~~~~~~~~~~~~~   83 (208)
                      |...+.+++|++||=.|+  |.|..+..+++..|++|++++.++...+.+++   ..|...   ++. .   ++.+ + .
T Consensus        59 l~~~~~l~~~~~vLDiGc--G~G~~~~~la~~~~~~v~gvD~s~~~i~~a~~~~~~~gl~~~v~~~~-~---d~~~-l-~  130 (282)
T d2o57a1          59 LAMTGVLQRQAKGLDLGA--GYGGAARFLVRKFGVSIDCLNIAPVQNKRNEEYNNQAGLADNITVKY-G---SFLE-I-P  130 (282)
T ss_dssp             HHHTTCCCTTCEEEEETC--TTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHHTCTTTEEEEE-C---CTTS-C-S
T ss_pred             HHHhcCCCCCCEEEEeCC--CCcHHHhhhhccCCcEEEEEeccchhhhhhhcccccccccccccccc-c---cccc-c-c
Confidence            334467899999999984  46777888888889999999999987766663   234321   221 1   1111 0 1


Q ss_pred             HCCCCccEEEeCCC-------chhHHHHHHhhccCCEEEEEecc
Q 028523           84 YFPEGINIYFENVG-------GKMLDAVLLNMRIQGRITLCGMI  120 (208)
Q Consensus        84 ~~~~~~d~v~d~~g-------~~~~~~~~~~l~~~G~~v~~g~~  120 (208)
                      ...+.||+|+-.-.       ...+..+.++|+|||+++.....
T Consensus       131 ~~~~sfD~V~~~~~l~h~~d~~~~l~~~~~~LkpgG~l~~~~~~  174 (282)
T d2o57a1         131 CEDNSYDFIWSQDAFLHSPDKLKVFQECARVLKPRGVMAITDPM  174 (282)
T ss_dssp             SCTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEEE
T ss_pred             ccccccchhhccchhhhccCHHHHHHHHHHhcCCCcEEEEEEee
Confidence            12236999975322       13578999999999998876543

>d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]

Probab=97.65  E-value=0.00012  Score=52.16  Aligned_cols=82  Identities=11%  Similarity=0.204  Sum_probs=55.7

Q ss_pred             CCCCCEEEEecCC--chHHHHHHHHHHHcCCEEEEEeCCHHHH-HHHHHhcCCCe---eEecCCCcc---HHHHHHhHCC
Q 028523           16 PKQGEYVFVSAAS--GAVGQLVGQFAKLVGCYVVGSAGSKDKV-DLLKNKFGFDE---AFNYKEEPD---LDAALKRYFP   86 (208)
Q Consensus        16 ~~~g~~vli~ga~--g~vG~~a~qla~~~g~~v~~~~~s~~~~-~~~~~~~g~~~---v~~~~~~~~---~~~~~~~~~~   86 (208)
                      +-+|+++||+||+  .++|.+.++-+...|++|+.+.++.++. +.+.++++...   ..|..+..+   ..+.+.+...
T Consensus         3 ~l~gK~~lItGaag~~GIG~aiA~~la~~Ga~Vil~~~~~~~~~~~~~~~~~~~~~~~~~dv~~~~~~~~~~~~v~~~~~   82 (268)
T d2h7ma1           3 LLDGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRITDRLPAKAPLLELDVQNEEHLASLAGRVTEAIG   82 (268)
T ss_dssp             TTTTCEEEECCCSSTTCHHHHHHHHHHHTTCEEEEEECSCHHHHHHHHTTSSSCCCEEECCTTCHHHHHHHHHHHHHHHC
T ss_pred             CCCCCEEEEECCCCCCHHHHHHHHHHHHcCCEEEEEeCChHHHHHHHHHHcCCceeeEeeecccccccccccchhhhccc
Confidence            4578999999954  5799999999999999999999887765 44554666532   233333212   3333333332


Q ss_pred             C--CccEEEeCCC
Q 028523           87 E--GINIYFENVG   97 (208)
Q Consensus        87 ~--~~d~v~d~~g   97 (208)
                      .  .+|+++++.|
T Consensus        83 ~~~~ld~~i~~ag   95 (268)
T d2h7ma1          83 AGNKLDGVVHSIG   95 (268)
T ss_dssp             TTCCEEEEEECCC
T ss_pred             cCCCcceeeeccc
Confidence            2  6899999887

>d1pjza_ c.66.1.36 (A:) Thiopurine S-methyltransferase {Pseudomonas syringae [TaxId: 317]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Thiopurine S-methyltransferase
domain: Thiopurine S-methyltransferase
species: Pseudomonas syringae [TaxId: 317]

Probab=97.63  E-value=0.00032  Score=47.28  Aligned_cols=101  Identities=15%  Similarity=0.068  Sum_probs=66.0

Q ss_pred             HhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCee---------EecCC-------Cc
Q 028523           12 EVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEA---------FNYKE-------EP   75 (208)
Q Consensus        12 ~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~v---------~~~~~-------~~   75 (208)
                      ....+.+|.+||..|+  |.|..++.+|+ .|++|++++.|+.-.+.+++..+....         .+...       ..
T Consensus        14 ~~l~~~~~~rvLd~GC--G~G~~a~~la~-~G~~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~   90 (201)
T d1pjza_          14 SSLNVVPGARVLVPLC--GKSQDMSWLSG-QGYHVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCGDFF   90 (201)
T ss_dssp             HHHCCCTTCEEEETTT--CCSHHHHHHHH-HCCEEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEECCS
T ss_pred             HHcCCCCCCEEEEecC--cCCHHHHHHHH-cCCceEeecccHHHHHHHHHHhccccchhhhhhhhhccccccceeccccc
Confidence            3457899999999995  56788888886 499999999999999998854432111         00000       00


Q ss_pred             cHHHHHHhHCCCCccEEEeCCCc---------hhHHHHHHhhccCCEEEEEec
Q 028523           76 DLDAALKRYFPEGINIYFENVGG---------KMLDAVLLNMRIQGRITLCGM  119 (208)
Q Consensus        76 ~~~~~~~~~~~~~~d~v~d~~g~---------~~~~~~~~~l~~~G~~v~~g~  119 (208)
                      ++.....    ..+|.|++...-         ..+..+.+.|+|||+++....
T Consensus        91 ~l~~~~~----~~~D~i~~~~~l~~l~~~~~~~~~~~i~~~LkpgG~l~l~~~  139 (201)
T d1pjza_          91 ALTARDI----GHCAAFYDRAAMIALPADMRERYVQHLEALMPQACSGLLITL  139 (201)
T ss_dssp             SSTHHHH----HSEEEEEEESCGGGSCHHHHHHHHHHHHHHSCSEEEEEEEEE
T ss_pred             ccccccc----cceeEEEEEeeeEecchhhhHHHHHHHHHhcCCCcEEEEEEc
Confidence            1100000    148998874431         246778889999999876543

>d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sepiapterin reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.61  E-value=7.9e-05  Score=53.12  Aligned_cols=46  Identities=24%  Similarity=0.330  Sum_probs=37.3

Q ss_pred             CCCEEEEecCCchHHHHHHH-HHHH--cCCEEEEEeCCHHHHHHHHHhc
Q 028523           18 QGEYVFVSAASGAVGQLVGQ-FAKL--VGCYVVGSAGSKDKVDLLKNKF   63 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~q-la~~--~g~~v~~~~~s~~~~~~~~~~~   63 (208)
                      +|+.++|+||++|+|.+.++ +++.  .|++|+.+++++++.+.+.+++
T Consensus         5 ~gKvalITGas~GIG~aiA~~lA~~~~~G~~Vv~~~r~~~~l~~~~~~l   53 (259)
T d1oaaa_           5 GCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEEL   53 (259)
T ss_dssp             BSEEEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHhcccCCCEEEEEECCHHHHHHHHHHH
Confidence            57888999999999998765 5553  5899999999999887765443

>d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Escherichia coli [TaxId: 562]

Probab=97.61  E-value=0.00015  Score=51.45  Aligned_cols=81  Identities=10%  Similarity=0.174  Sum_probs=53.0

Q ss_pred             CCCCEEEEecCCc--hHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH---hcCCCeeEecCCC--ccHHHHHHhHCC--C
Q 028523           17 KQGEYVFVSAASG--AVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKN---KFGFDEAFNYKEE--PDLDAALKRYFP--E   87 (208)
Q Consensus        17 ~~g~~vli~ga~g--~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~---~~g~~~v~~~~~~--~~~~~~~~~~~~--~   87 (208)
                      -+|+++||+||+|  |+|.+.+..+...|++|+.+.++++..+.+.+   ..+....+.....  .+....+.+...  +
T Consensus         3 L~gK~~lITGass~~GIG~aiA~~l~~~G~~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (258)
T d1qsga_           3 LSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQLGSDIVLQCDVAEDASIDTMFAELGKVWP   82 (258)
T ss_dssp             TTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHTTCS
T ss_pred             CCCCEEEEECCCCchhHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHhhcCCcceeecccchHHHHHHHHHHhhhccc
Confidence            4789999999988  79999999999999999999988765544432   3344333322222  122223333322  2


Q ss_pred             CccEEEeCCC
Q 028523           88 GINIYFENVG   97 (208)
Q Consensus        88 ~~d~v~d~~g   97 (208)
                      .+|+.+++.+
T Consensus        83 ~~d~~v~~a~   92 (258)
T d1qsga_          83 KFDGFVHSIG   92 (258)
T ss_dssp             SEEEEEECCC
T ss_pred             ccceEEEeec
Confidence            6899998764

>d1r18a_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=97.61  E-value=4.2e-05  Score=53.30  Aligned_cols=97  Identities=14%  Similarity=0.162  Sum_probs=60.7

Q ss_pred             CCCCCCEEEEecCCchHHHHHHHHHHHc---C----CEEEEEeCCHHHHHHHHHhc--------CCCeeEecCCCccHHH
Q 028523           15 SPKQGEYVFVSAASGAVGQLVGQFAKLV---G----CYVVGSAGSKDKVDLLKNKF--------GFDEAFNYKEEPDLDA   79 (208)
Q Consensus        15 ~~~~g~~vli~ga~g~vG~~a~qla~~~---g----~~v~~~~~s~~~~~~~~~~~--------g~~~v~~~~~~~~~~~   79 (208)
                      .+++|++||..|.  +.|..++.+++..   |    .+|+.+...++-.+.+++.+        +...+.... . +..+
T Consensus        77 ~l~~g~~VLeIGt--GsGY~ta~la~l~g~~g~~~~~~V~~iE~~~~l~~~a~~~l~~~~~~~~~~~nv~~~~-~-d~~~  152 (223)
T d1r18a_          77 HLKPGARILDVGS--GSGYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSMLDSGQLLIVE-G-DGRK  152 (223)
T ss_dssp             TCCTTCEEEEESC--TTSHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHHHHHHTSEEEEE-S-CGGG
T ss_pred             ccCCCCeEEEecC--CCCHHHHHHHHHhhhccCCcccEEEEEecCHHHHHHHHHhhhhcchhhcCccEEEEEe-c-cccc
Confidence            7899999999994  5576666666554   3    38999998887666554321        211221111 1 1111


Q ss_pred             HHHhHCCCCccEEEeCCCc-hhHHHHHHhhccCCEEEEE
Q 028523           80 ALKRYFPEGINIYFENVGG-KMLDAVLLNMRIQGRITLC  117 (208)
Q Consensus        80 ~~~~~~~~~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~  117 (208)
                      ...  ..++||.|+-+.+- ..-...++.|++||+++..
T Consensus       153 ~~~--~~~~fD~Iiv~~a~~~~p~~l~~~Lk~gG~lV~p  189 (223)
T d1r18a_         153 GYP--PNAPYNAIHVGAAAPDTPTELINQLASGGRLIVP  189 (223)
T ss_dssp             CCG--GGCSEEEEEECSCBSSCCHHHHHTEEEEEEEEEE
T ss_pred             ccc--cccceeeEEEEeechhchHHHHHhcCCCcEEEEE
Confidence            000  11269999887773 4456788899999999874

>d1bg6a2 c.2.1.6 (A:4-187) N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {Arthrobacter, strain 1c [TaxId: 1663]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: N-(1-D-carboxylethyl)-L-norvaline dehydrogenase
species: Arthrobacter, strain 1c [TaxId: 1663]

Probab=97.60  E-value=0.0007  Score=45.14  Aligned_cols=83  Identities=16%  Similarity=0.143  Sum_probs=57.6

Q ss_pred             CEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCee-------EecCC--CccHHHHHHhHCCCCcc
Q 028523           20 EYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEA-------FNYKE--EPDLDAALKRYFPEGIN   90 (208)
Q Consensus        20 ~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~v-------~~~~~--~~~~~~~~~~~~~~~~d   90 (208)
                      .+|-|.|+ |.+|++.+..+...|.+|++.++++++.+.++ +.+....       .....  ..+..+.++     .+|
T Consensus         2 k~iaIiGa-G~~G~~~A~~l~~~G~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~-----~aD   74 (184)
T d1bg6a2           2 KTYAVLGL-GNGGHAFAAYLALKGQSVLAWDIDAQRIKEIQ-DRGAIIAEGPGLAGTAHPDLLTSDIGLAVK-----DAD   74 (184)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHH-HHTSEEEESSSCCEEECCSEEESCHHHHHT-----TCS
T ss_pred             CEEEEECc-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-HcCCCchhhhhhhhhhhhhhhhhhhHhHhc-----CCC
Confidence            57899996 99999999999999999999999999988887 5442111       00000  003344343     489


Q ss_pred             EEEeCCCchhHHHHHHhhc
Q 028523           91 IYFENVGGKMLDAVLLNMR  109 (208)
Q Consensus        91 ~v~d~~g~~~~~~~~~~l~  109 (208)
                      ++|-++........++.++
T Consensus        75 ~iii~v~~~~~~~~~~~i~   93 (184)
T d1bg6a2          75 VILIVVPAIHHASIAANIA   93 (184)
T ss_dssp             EEEECSCGGGHHHHHHHHG
T ss_pred             EEEEEEchhHHHHHHHHhh
Confidence            9999998765555554444

>d1zx0a1 c.66.1.16 (A:8-236) Guanidinoacetate methyltransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Guanidinoacetate methyltransferase
domain: Guanidinoacetate methyltransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.59  E-value=5.8e-05  Score=52.81  Aligned_cols=99  Identities=6%  Similarity=-0.072  Sum_probs=65.9

Q ss_pred             CCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCC-CeeEecCCCccHHHHHHhHCCCCccEEE-
Q 028523           16 PKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGF-DEAFNYKEEPDLDAALKRYFPEGINIYF-   93 (208)
Q Consensus        16 ~~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~-~~v~~~~~~~~~~~~~~~~~~~~~d~v~-   93 (208)
                      ..+|.+||-.|  .|.|..+..+++..+.+|++++.++.-.+.+++.... ...+..... +..........+.||.++ 
T Consensus        51 ~~~g~~VLdIG--cG~G~~a~~~a~~~~~~v~~id~s~~~~~~a~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~fD~i~f  127 (229)
T d1zx0a1          51 SSKGGRVLEVG--FGMAIAASKVQEAPIDEHWIIECNDGVFQRLRDWAPRQTHKVIPLKG-LWEDVAPTLPDGHFDGILY  127 (229)
T ss_dssp             TTTCEEEEEEC--CTTSHHHHHHHTSCEEEEEEEECCHHHHHHHHHHGGGCSSEEEEEES-CHHHHGGGSCTTCEEEEEE
T ss_pred             ccCCCeEEEee--ccchHHHHHHHHcCCCeEEEeCCCHHHHHHHHHHhhhcccccccccc-cccccccccccccccceee
Confidence            36788999998  4668888888887667999999999988888843321 111111112 444444444445798884 


Q ss_pred             eCCCc-h----------hHHHHHHhhccCCEEEEE
Q 028523           94 ENVGG-K----------MLDAVLLNMRIQGRITLC  117 (208)
Q Consensus        94 d~~g~-~----------~~~~~~~~l~~~G~~v~~  117 (208)
                      |+... .          .+..+.+.|+|||.++..
T Consensus       128 D~~~~~~~~~~~~~~~~~~~~~~r~LkpGG~~~~~  162 (229)
T d1zx0a1         128 DTYPLSEETWHTHQFNFIKNHAFRLLKPGGVLTYC  162 (229)
T ss_dssp             CCCCCBGGGTTTHHHHHHHHTHHHHEEEEEEEEEC
T ss_pred             cccccccccccccCHHHHHHHHHHHcCCCcEEEEE
Confidence            65432 1          356688899999999764

>d1i9ga_ c.66.1.13 (A:) Probable methyltransferase Rv2118c {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: tRNA(1-methyladenosine) methyltransferase-like
domain: Probable methyltransferase Rv2118c
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=97.59  E-value=0.00048  Score=48.97  Aligned_cols=102  Identities=17%  Similarity=0.155  Sum_probs=71.4

Q ss_pred             HHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC--EEEEEeCCHHHHHHHHHhc----C--CCee-EecCCCccHHHH
Q 028523           10 FFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGC--YVVGSAGSKDKVDLLKNKF----G--FDEA-FNYKEEPDLDAA   80 (208)
Q Consensus        10 l~~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g~--~v~~~~~s~~~~~~~~~~~----g--~~~v-~~~~~~~~~~~~   80 (208)
                      +....++++|++||=.|  .|.|.++..+|+..|.  +|+.++.+++..+.+++.+    +  .+.+ +...   +..+ 
T Consensus        88 Ii~~l~i~PG~~VLE~G--~GsG~lt~~La~~vgp~G~V~~~d~~~~~~~~Ar~n~~~~~~~~~~nv~~~~~---d~~~-  161 (264)
T d1i9ga_          88 IVHEGDIFPGARVLEAG--AGSGALTLSLLRAVGPAGQVISYEQRADHAEHARRNVSGCYGQPPDNWRLVVS---DLAD-  161 (264)
T ss_dssp             HHHHTTCCTTCEEEEEC--CTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHHTSCCTTEEEECS---CGGG-
T ss_pred             HHHHhCCCCCCEEEecC--cCCcHHHHHHHHhhCCCcEEEEecCCHHHHHHHHHhhhhhccCCCceEEEEec---cccc-
Confidence            44668899999999887  4678899999999864  9999999999888877422    1  1222 2111   2111 


Q ss_pred             HHhHCCCCccEEEeCCCc--hhHHHHHHhhccCCEEEEEe
Q 028523           81 LKRYFPEGINIYFENVGG--KMLDAVLLNMRIQGRITLCG  118 (208)
Q Consensus        81 ~~~~~~~~~d~v~d~~g~--~~~~~~~~~l~~~G~~v~~g  118 (208)
                       ..+..+.||.||--...  ..+..+.+.|+|||+++.+.
T Consensus       162 -~~~~~~~fDaV~ldlp~P~~~l~~~~~~LkpGG~lv~~~  200 (264)
T d1i9ga_         162 -SELPDGSVDRAVLDMLAPWEVLDAVSRLLVAGGVLMVYV  200 (264)
T ss_dssp             -CCCCTTCEEEEEEESSCGGGGHHHHHHHEEEEEEEEEEE
T ss_pred             -ccccCCCcceEEEecCCHHHHHHHHHhccCCCCEEEEEe
Confidence             01112379988765553  57889999999999998764

>d1p77a1 c.2.1.7 (A:102-272) Shikimate 5-dehydrogenase AroE {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Haemophilus influenzae [TaxId: 727]

Probab=97.55  E-value=0.00025  Score=47.16  Aligned_cols=99  Identities=9%  Similarity=-0.003  Sum_probs=62.4

Q ss_pred             HHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCC---eeEecCCCccHHHHHHhH
Q 028523            8 AGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFD---EAFNYKEEPDLDAALKRY   84 (208)
Q Consensus         8 ~~l~~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~---~v~~~~~~~~~~~~~~~~   84 (208)
                      .+|.+.....++.+|+|.|+ ||.+.+++..+...+.+++++.|+.++.+.+.+.++..   ..+...+          .
T Consensus         7 ~~l~~~~~~~~~k~vlIlGa-GGaarai~~aL~~~~~~i~I~nR~~~~a~~l~~~~~~~~~~~~~~~~~----------~   75 (171)
T d1p77a1           7 TDLQRLNWLRPNQHVLILGA-GGATKGVLLPLLQAQQNIVLANRTFSKTKELAERFQPYGNIQAVSMDS----------I   75 (171)
T ss_dssp             HHHHHTTCCCTTCEEEEECC-SHHHHTTHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGSCEEEEEGGG----------C
T ss_pred             HHHHHcCCCCCCCEEEEECC-cHHHHHHHHHHcccCceeeeccchHHHHHHHHHHHhhccccchhhhcc----------c
Confidence            34544444558889999995 99999998877776679999999999888776565431   1222111          1


Q ss_pred             CCCCccEEEeCCCchhHH----HHHHhhccCCEEEEE
Q 028523           85 FPEGINIYFENVGGKMLD----AVLLNMRIQGRITLC  117 (208)
Q Consensus        85 ~~~~~d~v~d~~g~~~~~----~~~~~l~~~G~~v~~  117 (208)
                      ....+|++|+|++...-.    .....++++..++.+
T Consensus        76 ~~~~~diiIN~tp~g~~~~~~~~~~~~~~~~~~~~D~  112 (171)
T d1p77a1          76 PLQTYDLVINATSAGLSGGTASVDAEILKLGSAFYDM  112 (171)
T ss_dssp             CCSCCSEEEECCCC-------CCCHHHHHHCSCEEES
T ss_pred             cccccceeeecccccccccccchhhhhhcccceeeee
Confidence            112689999998732111    112334556655544

>d1vl5a_ c.66.1.41 (A:) Hypothetical protein BH2331 {Bacillus halodurans [TaxId: 86665]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: UbiE/COQ5-like
domain: Hypothetical protein BH2331
species: Bacillus halodurans [TaxId: 86665]

Probab=97.45  E-value=0.00042  Score=48.08  Aligned_cols=101  Identities=16%  Similarity=0.216  Sum_probs=67.6

Q ss_pred             HHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH---hcCCCe--eEecCCCccHHHHHHhH
Q 028523           10 FFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKN---KFGFDE--AFNYKEEPDLDAALKRY   84 (208)
Q Consensus        10 l~~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~---~~g~~~--v~~~~~~~~~~~~~~~~   84 (208)
                      |.+.++++++++||=.|+  |.|..+..+++. |.+|++++.|++-.+.+++   ..+.+.  ++..+-. ++     .+
T Consensus         7 ll~~~~l~~~~rVLDiGc--G~G~~~~~l~~~-~~~v~gvD~s~~~i~~A~~~~~~~~~~~i~~~~~d~~-~l-----~~   77 (231)
T d1vl5a_           7 LMQIAALKGNEEVLDVAT--GGGHVANAFAPF-VKKVVAFDLTEDILKVARAFIEGNGHQQVEYVQGDAE-QM-----PF   77 (231)
T ss_dssp             HHHHHTCCSCCEEEEETC--TTCHHHHHHGGG-SSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCC--CC-----CS
T ss_pred             HHHhcCCCCcCEEEEecc--cCcHHHHHHHHh-CCEEEEEECCHHHHhhhhhcccccccccccccccccc-cc-----cc
Confidence            446789999999999984  467777676654 7899999999987776653   234432  2211111 11     12


Q ss_pred             CCCCccEEEeCCC-------chhHHHHHHhhccCCEEEEEec
Q 028523           85 FPEGINIYFENVG-------GKMLDAVLLNMRIQGRITLCGM  119 (208)
Q Consensus        85 ~~~~~d~v~d~~g-------~~~~~~~~~~l~~~G~~v~~g~  119 (208)
                      ..+.||+|+..-.       ...+..+.++|+|||+++....
T Consensus        78 ~~~~fD~v~~~~~l~~~~d~~~~l~~~~r~LkpgG~l~i~~~  119 (231)
T d1vl5a_          78 TDERFHIVTCRIAAHHFPNPASFVSEAYRVLKKGGQLLLVDN  119 (231)
T ss_dssp             CTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred             cccccccccccccccccCCHHHHHHHHHHhcCCCcEEEEEeC
Confidence            2336999976432       1368899999999999987643

>d1susa1 c.66.1.1 (A:21-247) Caffeoyl-CoA O-methyltransferase {Alfalfa (Medicago sativa) [TaxId: 3879]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: COMT-like
domain: Caffeoyl-CoA O-methyltransferase
species: Alfalfa (Medicago sativa) [TaxId: 3879]

Probab=97.45  E-value=0.00069  Score=47.04  Aligned_cols=103  Identities=12%  Similarity=0.086  Sum_probs=72.6

Q ss_pred             HhcCCCCCCEEEEecCCchHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHH---hcCCCeeEecCCCccHHHHHHhH--
Q 028523           12 EVCSPKQGEYVFVSAASGAVGQLVGQFAKLV--GCYVVGSAGSKDKVDLLKN---KFGFDEAFNYKEEPDLDAALKRY--   84 (208)
Q Consensus        12 ~~~~~~~g~~vli~ga~g~vG~~a~qla~~~--g~~v~~~~~s~~~~~~~~~---~~g~~~v~~~~~~~~~~~~~~~~--   84 (208)
                      .+.+....++||-.|  +.+|..++.+++.+  +.+++.+..+++..+.+++   +.|...-+..... +..+.+.++  
T Consensus        53 ~L~~~~~~k~iLEiG--T~~GyStl~la~al~~~g~v~tie~~~~~~~~A~~~~~~~g~~~~i~~~~g-~a~~~L~~l~~  129 (227)
T d1susa1          53 MLLKLINAKNTMEIG--VYTGYSLLATALAIPEDGKILAMDINKENYELGLPVIKKAGVDHKIDFREG-PALPVLDEMIK  129 (227)
T ss_dssp             HHHHHHTCCEEEEEC--CGGGHHHHHHHHHSCTTCEEEEEESCCHHHHHHHHHHHHTTCGGGEEEEES-CHHHHHHHHHH
T ss_pred             HHHHhcCCCcEEEec--chhhhhHHHHHhhCCCCcEEEEEeccchhHHHHHHHHHHhccccceeeeeh-HHHHHHHHHHh
Confidence            334556778999998  67899999999887  4699999999988777664   3466543333333 445555544  


Q ss_pred             ---CCCCccEEEeCCC-c---hhHHHHHHhhccCCEEEEE
Q 028523           85 ---FPEGINIYFENVG-G---KMLDAVLLNMRIQGRITLC  117 (208)
Q Consensus        85 ---~~~~~d~v~d~~g-~---~~~~~~~~~l~~~G~~v~~  117 (208)
                         ..+.||.||--.. .   ..++.+++.|++||.++.=
T Consensus       130 ~~~~~~~fD~iFiDa~k~~y~~~~e~~~~ll~~gGiii~D  169 (227)
T d1susa1         130 DEKNHGSYDFIFVDADKDNYLNYHKRLIDLVKVGGVIGYD  169 (227)
T ss_dssp             CGGGTTCBSEEEECSCSTTHHHHHHHHHHHBCTTCCEEEE
T ss_pred             ccccCCceeEEEeccchhhhHHHHHHHHhhcCCCcEEEEc
Confidence               2337999976443 2   3688999999999998763

>d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Trypanosoma cruzi [TaxId: 5693]

Probab=97.44  E-value=0.00045  Score=49.01  Aligned_cols=35  Identities=11%  Similarity=0.123  Sum_probs=31.8

Q ss_pred             EEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHH
Q 028523           21 YVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDK   55 (208)
Q Consensus        21 ~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~   55 (208)
                      ..||+||++++|.+.++.+...|++|+.++++.++
T Consensus         3 vAlVTGas~GIG~aia~~la~~G~~Vvi~~r~~~~   37 (266)
T d1mxha_           3 AAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEG   37 (266)
T ss_dssp             EEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHH
T ss_pred             EEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCchH
Confidence            56999999999999999999999999999988554

>d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein At5g02240 (T7H20 290)
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=97.42  E-value=0.00019  Score=49.81  Aligned_cols=71  Identities=23%  Similarity=0.173  Sum_probs=46.4

Q ss_pred             CEEEEecCCchHHHHHHHHHHHcCC--EEEEEeCCHHHHHHHHHhcCCCe-eEecCCCccHHHHHHhHCCCCccEEEeCC
Q 028523           20 EYVFVSAASGAVGQLVGQFAKLVGC--YVVGSAGSKDKVDLLKNKFGFDE-AFNYKEEPDLDAALKRYFPEGINIYFENV   96 (208)
Q Consensus        20 ~~vli~ga~g~vG~~a~qla~~~g~--~v~~~~~s~~~~~~~~~~~g~~~-v~~~~~~~~~~~~~~~~~~~~~d~v~d~~   96 (208)
                      .+|||+||+|.+|...++.+...|.  .|+...|++++.+.+.  -+... ..|..+   ... +.+... ++|.|+.+.
T Consensus         4 ~tVlVtGatG~iG~~l~~~Ll~~g~~v~v~~~~R~~~~~~~~~--~~~~~~~~d~~~---~~~-~~~~~~-~~d~vi~~a   76 (252)
T d2q46a1           4 PTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKIG--GEADVFIGDITD---ADS-INPAFQ-GIDALVILT   76 (252)
T ss_dssp             CEEEEESTTSTTHHHHHHHHHHTTTTCEEEEEESCHHHHHHTT--CCTTEEECCTTS---HHH-HHHHHT-TCSEEEECC
T ss_pred             CEEEEECCccHHHHHHHHHHHHCCCcEEEEEEcCCHHHHHhcc--CCcEEEEeeecc---ccc-cccccc-cceeeEEEE
Confidence            5899999999999999998888885  6777788887665443  12222 223332   222 222222 489999887


Q ss_pred             C
Q 028523           97 G   97 (208)
Q Consensus        97 g   97 (208)
                      +
T Consensus        77 ~   77 (252)
T d2q46a1          77 S   77 (252)
T ss_dssp             C
T ss_pred             e
Confidence            5

>d2f1ka2 c.2.1.6 (A:1-165) Prephenate dehydrogenase TyrA {Synechocystis sp. pcc 6803 [TaxId: 1148]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Synechocystis sp. pcc 6803 [TaxId: 1148]

Probab=97.39  E-value=0.00076  Score=44.31  Aligned_cols=85  Identities=16%  Similarity=0.153  Sum_probs=58.0

Q ss_pred             EEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCC-CeeEecCCCccHHHHHHhHCCCCccEEEeCCCch
Q 028523           21 YVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGF-DEAFNYKEEPDLDAALKRYFPEGINIYFENVGGK   99 (208)
Q Consensus        21 ~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~-~~v~~~~~~~~~~~~~~~~~~~~~d~v~d~~g~~   99 (208)
                      +|.|.|. |.+|...++.++..|.+|++.++++++.+.++ +.|. +...+..      +.+     ...|+||-++...
T Consensus         2 kI~iIG~-G~mG~~lA~~l~~~g~~V~~~d~~~~~~~~a~-~~~~~~~~~~~~------~~~-----~~~DiIilavp~~   68 (165)
T d2f1ka2           2 KIGVVGL-GLIGASLAGDLRRRGHYLIGVSRQQSTCEKAV-ERQLVDEAGQDL------SLL-----QTAKIIFLCTPIQ   68 (165)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHH-HTTSCSEEESCG------GGG-----TTCSEEEECSCHH
T ss_pred             EEEEEee-cHHHHHHHHHHHHCCCEEEEEECCchHHHHHH-Hhhccceeeeec------ccc-----cccccccccCcHh
Confidence            4788885 99999988888889999999999999999888 7775 3332211      111     1489999988754


Q ss_pred             hHHHHHH----hhccCCEEEEEe
Q 028523          100 MLDAVLL----NMRIQGRITLCG  118 (208)
Q Consensus       100 ~~~~~~~----~l~~~G~~v~~g  118 (208)
                      .....++    .+.++--++.++
T Consensus        69 ~~~~vl~~l~~~l~~~~iv~~~~   91 (165)
T d2f1ka2          69 LILPTLEKLIPHLSPTAIVTDVA   91 (165)
T ss_dssp             HHHHHHHHHGGGSCTTCEEEECC
T ss_pred             hhhhhhhhhhhhcccccceeecc
Confidence            4444444    444445554443

>d2nxca1 c.66.1.39 (A:1-254) PrmA-like protein TTHA0656 (TT0836) {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Ribosomal protein L11 methyltransferase PrmA
domain: PrmA-like protein TTHA0656 (TT0836)
species: Thermus thermophilus [TaxId: 274]

Probab=97.38  E-value=0.001  Score=46.96  Aligned_cols=96  Identities=18%  Similarity=0.171  Sum_probs=63.7

Q ss_pred             CCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH---hcCCCeeEecCCCccHHHHHHhHCCCCccEE
Q 028523           16 PKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKN---KFGFDEAFNYKEEPDLDAALKRYFPEGINIY   92 (208)
Q Consensus        16 ~~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~---~~g~~~v~~~~~~~~~~~~~~~~~~~~~d~v   92 (208)
                      .++|++||=.|.  |.|..++.++ ..|++|++++.++...+.+++   ..|....+-  .. +..+.   ...+.||+|
T Consensus       118 ~~~g~~VLDiGc--GsG~l~i~aa-~~g~~V~gvDis~~av~~A~~na~~n~~~~~~~--~~-d~~~~---~~~~~fD~V  188 (254)
T d2nxca1         118 LRPGDKVLDLGT--GSGVLAIAAE-KLGGKALGVDIDPMVLPQAEANAKRNGVRPRFL--EG-SLEAA---LPFGPFDLL  188 (254)
T ss_dssp             CCTTCEEEEETC--TTSHHHHHHH-HTTCEEEEEESCGGGHHHHHHHHHHTTCCCEEE--ES-CHHHH---GGGCCEEEE
T ss_pred             cCccCEEEEccc--chhHHHHHHH-hcCCEEEEEECChHHHHHHHHHHHHcCCceeEE--ec-ccccc---ccccccchh
Confidence            678999998884  3466666554 468999999999998777763   234432221  12 33322   122379999


Q ss_pred             EeCCCch----hHHHHHHhhccCCEEEEEecc
Q 028523           93 FENVGGK----MLDAVLLNMRIQGRITLCGMI  120 (208)
Q Consensus        93 ~d~~g~~----~~~~~~~~l~~~G~~v~~g~~  120 (208)
                      +......    .+....+.|+|||+++..|..
T Consensus       189 ~ani~~~~l~~l~~~~~~~LkpGG~lilSgil  220 (254)
T d2nxca1         189 VANLYAELHAALAPRYREALVPGGRALLTGIL  220 (254)
T ss_dssp             EEECCHHHHHHHHHHHHHHEEEEEEEEEEEEE
T ss_pred             hhccccccHHHHHHHHHHhcCCCcEEEEEecc
Confidence            8765532    456778899999999986653

>d2avna1 c.66.1.41 (A:1-246) Hypothetical methyltransferase TM1389 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: UbiE/COQ5-like
domain: Hypothetical methyltransferase TM1389
species: Thermotoga maritima [TaxId: 2336]

Probab=97.37  E-value=0.00048  Score=48.09  Aligned_cols=92  Identities=16%  Similarity=0.124  Sum_probs=64.7

Q ss_pred             CCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHHHHhHCCCCccEEEeC
Q 028523           16 PKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFEN   95 (208)
Q Consensus        16 ~~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~d~v~d~   95 (208)
                      ++++.+||=.|+  |.|..+..+++ .|++|++++.|+...+.++ +-+....+..... ++     ....+.||+|+..
T Consensus        40 ~~~~~~vLDiGc--G~G~~~~~l~~-~~~~v~giD~s~~~l~~a~-~~~~~~~~~~~~~-~l-----~~~~~~fD~ii~~  109 (246)
T d2avna1          40 LKNPCRVLDLGG--GTGKWSLFLQE-RGFEVVLVDPSKEMLEVAR-EKGVKNVVEAKAE-DL-----PFPSGAFEAVLAL  109 (246)
T ss_dssp             CCSCCEEEEETC--TTCHHHHHHHT-TTCEEEEEESCHHHHHHHH-HHTCSCEEECCTT-SC-----CSCTTCEEEEEEC
T ss_pred             cCCCCEEEEECC--CCchhcccccc-cceEEEEeecccccccccc-ccccccccccccc-cc-----ccccccccceeee
Confidence            557888988884  47888888876 5899999999999999998 5455444433222 21     1223479998864


Q ss_pred             CCc--------hhHHHHHHhhccCCEEEEE
Q 028523           96 VGG--------KMLDAVLLNMRIQGRITLC  117 (208)
Q Consensus        96 ~g~--------~~~~~~~~~l~~~G~~v~~  117 (208)
                      ...        ..+..+.++|+|||.++..
T Consensus       110 ~~~~~~~~d~~~~l~~i~r~Lk~gG~~ii~  139 (246)
T d2avna1         110 GDVLSYVENKDKAFSEIRRVLVPDGLLIAT  139 (246)
T ss_dssp             SSHHHHCSCHHHHHHHHHHHEEEEEEEEEE
T ss_pred             cchhhhhhhHHHHHHHHHhhcCcCcEEEEE
Confidence            321        2577888999999988764

>d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Leishmania major [TaxId: 5664]

Probab=97.34  E-value=0.0002  Score=51.52  Aligned_cols=40  Identities=15%  Similarity=0.144  Sum_probs=31.8

Q ss_pred             EEEEecCCchHHHHHHHHHHHcCCEEEEEeCC-HHHHHHHH
Q 028523           21 YVFVSAASGAVGQLVGQFAKLVGCYVVGSAGS-KDKVDLLK   60 (208)
Q Consensus        21 ~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s-~~~~~~~~   60 (208)
                      .+||+||++++|.+.++.+...|++|++++++ ++..+.+.
T Consensus         4 VAlITGas~GIG~aiA~~la~~Ga~V~i~~~~~~~~~~~~~   44 (284)
T d1e7wa_           4 VALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALS   44 (284)
T ss_dssp             EEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHH
T ss_pred             EEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCCHHHHHHHH
Confidence            46899999999999999999999999987755 44444433

>d2ahra2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Streptococcus pyogenes [TaxId: 1314]

Probab=97.33  E-value=0.0013  Score=42.57  Aligned_cols=86  Identities=9%  Similarity=0.135  Sum_probs=64.6

Q ss_pred             EEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHHHHhHCCCCccEEEeCCCchh
Q 028523           21 YVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVGGKM  100 (208)
Q Consensus        21 ~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~  100 (208)
                      +|.+.| +|.+|.+.+.-....|.++++..++.++.+.+.+++|...+-      +..+.+.     ..|+||-|+....
T Consensus         2 kIg~IG-~G~mG~al~~~l~~~~~~i~v~~r~~~~~~~l~~~~g~~~~~------~~~~~~~-----~~dvIilavkp~~   69 (152)
T d2ahra2           2 KIGIIG-VGKMASAIIKGLKQTPHELIISGSSLERSKEIAEQLALPYAM------SHQDLID-----QVDLVILGIKPQL   69 (152)
T ss_dssp             EEEEEC-CSHHHHHHHHHHTTSSCEEEEECSSHHHHHHHHHHHTCCBCS------SHHHHHH-----TCSEEEECSCGGG
T ss_pred             EEEEEe-ccHHHHHHHHHHHhCCCeEEEEcChHHhHHhhccccceeeec------hhhhhhh-----ccceeeeecchHh
Confidence            477888 599999887766666889999999999888876578864321      3444443     3899999998778


Q ss_pred             HHHHHHhhccCCEEEEEe
Q 028523          101 LDAVLLNMRIQGRITLCG  118 (208)
Q Consensus       101 ~~~~~~~l~~~G~~v~~g  118 (208)
                      +...++.++++..++.+.
T Consensus        70 ~~~vl~~l~~~~~iis~~   87 (152)
T d2ahra2          70 FETVLKPLHFKQPIISMA   87 (152)
T ss_dssp             HHHHHTTSCCCSCEEECC
T ss_pred             HHHHhhhcccceeEeccc
Confidence            888888888877766543

>d1yqga2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Neisseria meningitidis, serogroup B [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Neisseria meningitidis, serogroup B [TaxId: 487]

Probab=97.32  E-value=0.0018  Score=41.87  Aligned_cols=83  Identities=18%  Similarity=0.276  Sum_probs=58.5

Q ss_pred             EEEEecCCchHHHHHHH-HHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHHHHhHCCCCccEEEeCCCch
Q 028523           21 YVFVSAASGAVGQLVGQ-FAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVGGK   99 (208)
Q Consensus        21 ~vli~ga~g~vG~~a~q-la~~~g~~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~d~v~d~~g~~   99 (208)
                      +|.+.|+ |.+|.+.++ +.+.-+.++++.++++++.+.+.+++|.. +.+..+  .    +     ...|+||-++-..
T Consensus         2 kI~fIG~-G~MG~ai~~~l~~~~~~~i~v~~r~~~~~~~l~~~~~~~-~~~~~~--~----v-----~~~Div~lavkP~   68 (152)
T d1yqga2           2 NVYFLGG-GNMAAAVAGGLVKQGGYRIYIANRGAEKRERLEKELGVE-TSATLP--E----L-----HSDDVLILAVKPQ   68 (152)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHCSCEEEEECSSHHHHHHHHHHTCCE-EESSCC--C----C-----CTTSEEEECSCHH
T ss_pred             EEEEEcC-cHHHHHHHHHHHHCCCCcEEEEeCChhHHHHhhhhcccc-cccccc--c----c-----cccceEEEecCHH
Confidence            4778885 999998777 44544479999999999998888677763 222211  1    1     1379999988877


Q ss_pred             hHHHHHHhhccCCEEEE
Q 028523          100 MLDAVLLNMRIQGRITL  116 (208)
Q Consensus       100 ~~~~~~~~l~~~G~~v~  116 (208)
                      .+...++-+++.+.++.
T Consensus        69 ~~~~v~~~l~~~~~~vi   85 (152)
T d1yqga2          69 DMEAACKNIRTNGALVL   85 (152)
T ss_dssp             HHHHHHTTCCCTTCEEE
T ss_pred             HHHHhHHHHhhcccEEe
Confidence            77777777777666543

>d1pjqa1 c.2.1.11 (A:1-113) Siroheme synthase CysG, domain 1 {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Siroheme synthase N-terminal domain-like
domain: Siroheme synthase CysG, domain 1
species: Salmonella typhimurium [TaxId: 90371]

Probab=97.26  E-value=0.0024  Score=39.01  Aligned_cols=93  Identities=8%  Similarity=-0.037  Sum_probs=60.5

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHH-HHHHHHhcCCCeeEecCCCccHHHHHHhHCCCCccEEEeCC
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDK-VDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENV   96 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~-~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~d~v~d~~   96 (208)
                      .|.+|||.|+ |.+|..-++.+...|++|++++..... ...+. +-+.-......    +.+  .++  .++++|+.++
T Consensus        11 ~~k~vlVvG~-G~va~~ka~~ll~~ga~v~v~~~~~~~~~~~~~-~~~~i~~~~~~----~~~--~dl--~~~~lv~~at   80 (113)
T d1pjqa1          11 RDRDCLIVGG-GDVAERKARLLLEAGARLTVNALTFIPQFTVWA-NEGMLTLVEGP----FDE--TLL--DSCWLAIAAT   80 (113)
T ss_dssp             BTCEEEEECC-SHHHHHHHHHHHHTTBEEEEEESSCCHHHHHHH-TTTSCEEEESS----CCG--GGG--TTCSEEEECC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEeccCChHHHHHH-hcCCceeeccC----CCH--HHh--CCCcEEeecC
Confidence            5789999996 999999999999999998888754332 22222 22221222211    110  001  1589999998


Q ss_pred             Cchh-HHHHHHhhccCCEEEEEecc
Q 028523           97 GGKM-LDAVLLNMRIQGRITLCGMI  120 (208)
Q Consensus        97 g~~~-~~~~~~~l~~~G~~v~~g~~  120 (208)
                      +.+. -.......++.|.++.+...
T Consensus        81 ~d~~~n~~i~~~a~~~~ilVNv~D~  105 (113)
T d1pjqa1          81 DDDTVNQRVSDAAESRRIFCNVVDA  105 (113)
T ss_dssp             SCHHHHHHHHHHHHHTTCEEEETTC
T ss_pred             CCHHHHHHHHHHHHHcCCEEEeCCC
Confidence            8654 45677788889999887653

>d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Aldehyde reductase II
species: Sporobolomyces salmonicolor [TaxId: 5005]

Probab=97.25  E-value=0.00039  Score=51.37  Aligned_cols=47  Identities=30%  Similarity=0.294  Sum_probs=40.5

Q ss_pred             cCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH
Q 028523           14 CSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLK   60 (208)
Q Consensus        14 ~~~~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~   60 (208)
                      .-+++|++|||+||+|-+|...++.+...|++|++++|+..+...+.
T Consensus         6 ~~~~~gk~VlVTG~sGfIGs~l~~~Ll~~G~~V~~~vR~~~~~~~~~   52 (342)
T d1y1pa1           6 AVLPEGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQ   52 (342)
T ss_dssp             CSSCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH
T ss_pred             CCCCCcCEEEEECCCCHHHHHHHHHHHHCcCEEEEEeCCchhHHHHH
Confidence            34688999999999999999999888888999999999887766554

>d1r0ka2 c.2.1.3 (A:3-126,A:265-290) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Zymomonas mobilis [TaxId: 542]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase
species: Zymomonas mobilis [TaxId: 542]

Probab=97.24  E-value=0.0064  Score=39.06  Aligned_cols=95  Identities=16%  Similarity=0.092  Sum_probs=62.1

Q ss_pred             CEEEEecCCchHHHHHHHHHHHc--CCEEEEEeCC--HHHHHHHHHhcCCCeeEecCCCccHHHHHHh------------
Q 028523           20 EYVFVSAASGAVGQLVGQFAKLV--GCYVVGSAGS--KDKVDLLKNKFGFDEAFNYKEEPDLDAALKR------------   83 (208)
Q Consensus        20 ~~vli~ga~g~vG~~a~qla~~~--g~~v~~~~~s--~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~------------   83 (208)
                      .+|.|+|+||++|..+.++.+..  .++|++.+..  -+.+....++|.+..++-.++. .. +.+..            
T Consensus         3 K~I~IlGsTGSIG~~tL~Vi~~~~d~f~v~~lsa~~N~~~L~~q~~ef~Pk~v~i~d~~-~~-~~l~~~~~~~~~~v~~g   80 (150)
T d1r0ka2           3 RTVTVLGATGSIGHSTLDLIERNLDRYQVIALTANRNVKDLADAAKRTNAKRAVIADPS-LY-NDLKEALAGSSVEAAAG   80 (150)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHTGGGEEEEEEEESSCHHHHHHHHHHTTCSEEEESCGG-GH-HHHHHHTTTCSSEEEES
T ss_pred             cEEEEECCCcHHHHHHHHHHHcCCCCcEEEEEEeCCCHHHHHHHHHhhccccceeccHH-HH-HHHHHHhhhcccccccC
Confidence            68999999999999999999876  4577766533  3333332227887765444332 21 11211            


Q ss_pred             ------HCCCCccEEEeCCC-chhHHHHHHhhccCCEEEE
Q 028523           84 ------YFPEGINIYFENVG-GKMLDAVLLNMRIQGRITL  116 (208)
Q Consensus        84 ------~~~~~~d~v~d~~g-~~~~~~~~~~l~~~G~~v~  116 (208)
                            .....+|+++.++. ..-+...+..++.|-++.+
T Consensus        81 ~~~l~~~~~~~~D~vv~Ai~G~~GL~~tl~ai~~gk~iaL  120 (150)
T d1r0ka2          81 ADALVEAAMMGADWTMAAIIGCAGLKATLAAIRKGKTVAL  120 (150)
T ss_dssp             HHHHHHHHTSCCSEEEECCCSGGGHHHHHHHHHTTSEEEE
T ss_pred             ccchheecccccceeeeecCchhHHHHHHHHHhcCCEEEE
Confidence                  11225799999865 5788888888888877654

>d1yl7a1 c.2.1.3 (A:2-105,A:215-245) Dihydrodipicolinate reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=97.22  E-value=0.0043  Score=39.17  Aligned_cols=33  Identities=18%  Similarity=0.059  Sum_probs=25.7

Q ss_pred             EEEEecCCchHHHHHHHHHHH-cCCEEEEEeCCH
Q 028523           21 YVFVSAASGAVGQLVGQFAKL-VGCYVVGSAGSK   53 (208)
Q Consensus        21 ~vli~ga~g~vG~~a~qla~~-~g~~v~~~~~s~   53 (208)
                      +|.|.|++|-+|...++.... -+.++.......
T Consensus         1 kI~v~Ga~GrMG~~i~~~i~~~~~~~l~~~~d~~   34 (135)
T d1yl7a1           1 RVGVLGAKGKVGATMVRAVAAADDLTLSAELDAG   34 (135)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHSTTSEEEEEECTT
T ss_pred             CEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecC
Confidence            588999999999998888765 466877766443

>d2jfga1 c.5.1.1 (A:1-93) UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD
species: Escherichia coli [TaxId: 562]

Probab=97.21  E-value=0.00039  Score=41.16  Aligned_cols=36  Identities=19%  Similarity=0.111  Sum_probs=32.0

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHH
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKD   54 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~   54 (208)
                      +|++|+|+|. |..|+++++++...|++|++.+.++.
T Consensus         4 ~~K~v~ViGl-G~sG~s~a~~L~~~g~~v~~~D~~~~   39 (93)
T d2jfga1           4 QGKNVVIIGL-GLTGLSCVDFFLARGVTPRVMDTRMT   39 (93)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHHHTTCCCEEEESSSS
T ss_pred             CCCEEEEEeE-CHHHHHHHHHHHHCCCEEEEeeCCcC
Confidence            5778999996 99999999999999999999997544

>d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=97.20  E-value=0.00052  Score=49.57  Aligned_cols=38  Identities=13%  Similarity=0.184  Sum_probs=33.6

Q ss_pred             CCCEEEEecCCc--hHHHHHHHHHHHcCCEEEEEeCCHHH
Q 028523           18 QGEYVFVSAASG--AVGQLVGQFAKLVGCYVVGSAGSKDK   55 (208)
Q Consensus        18 ~g~~vli~ga~g--~vG~~a~qla~~~g~~v~~~~~s~~~   55 (208)
                      +|+++||+||+|  |+|.+.++.+...|++|+++.++++.
T Consensus         7 ~gK~alVTGass~~GIG~aiA~~la~~Ga~Vvi~~~~~~~   46 (297)
T d1d7oa_           7 RGKRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPAL   46 (297)
T ss_dssp             TTCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEEEHHHH
T ss_pred             CCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEeCchhh
Confidence            688999999876  89999999999999999999876653

>d1j4aa1 c.2.1.4 (A:104-300) D-lactate dehydrogenase {Lactobacillus helveticus [TaxId: 1587]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-lactate dehydrogenase
species: Lactobacillus helveticus [TaxId: 1587]

Probab=97.20  E-value=0.0014  Score=44.37  Aligned_cols=87  Identities=18%  Similarity=0.138  Sum_probs=62.2

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHHHHhHCCCCccEEEeCCC
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVG   97 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~d~v~d~~g   97 (208)
                      .|.+|.|+| .|.+|...+++++.+|++|++.++........   .+.    ..  . ++.+.+.+     .|+++.++.
T Consensus        42 ~gk~vgIiG-~G~IG~~va~~l~~fg~~V~~~d~~~~~~~~~---~~~----~~--~-~l~~~l~~-----sDii~~~~p  105 (197)
T d1j4aa1          42 RDQVVGVVG-TGHIGQVFMQIMEGFGAKVITYDIFRNPELEK---KGY----YV--D-SLDDLYKQ-----ADVISLHVP  105 (197)
T ss_dssp             GGSEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSCCHHHHH---TTC----BC--S-CHHHHHHH-----CSEEEECSC
T ss_pred             cCCeEEEec-ccccchhHHHhHhhhcccccccCccccccccc---cee----ee--c-cccccccc-----cccccccCC
Confidence            478999999 59999999999999999999998664432221   121    11  1 45555543     799988776


Q ss_pred             -ch-----hHHHHHHhhccCCEEEEEecc
Q 028523           98 -GK-----MLDAVLLNMRIQGRITLCGMI  120 (208)
Q Consensus        98 -~~-----~~~~~~~~l~~~G~~v~~g~~  120 (208)
                       .+     .-...+..|+++..+|.++..
T Consensus       106 lt~~T~~li~~~~l~~mk~~a~lIN~sRG  134 (197)
T d1j4aa1         106 DVPANVHMINDESIAKMKQDVVIVNVSRG  134 (197)
T ss_dssp             CCGGGTTCBSHHHHHHSCTTEEEEECSCG
T ss_pred             ccccccccccHHHHhhhCCccEEEecCch
Confidence             22     236778899999888887653

>d2avda1 c.66.1.1 (A:44-262) COMT domain-containing protein 1, COMTD1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: COMT-like
domain: COMT domain-containing protein 1, COMTD1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.18  E-value=0.0011  Score=45.67  Aligned_cols=103  Identities=10%  Similarity=0.040  Sum_probs=71.3

Q ss_pred             HhcCCCCCCEEEEecCCchHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHH---hcCCCeeEecCCCccHHHHHHhH--
Q 028523           12 EVCSPKQGEYVFVSAASGAVGQLVGQFAKLV--GCYVVGSAGSKDKVDLLKN---KFGFDEAFNYKEEPDLDAALKRY--   84 (208)
Q Consensus        12 ~~~~~~~g~~vli~ga~g~vG~~a~qla~~~--g~~v~~~~~s~~~~~~~~~---~~g~~~v~~~~~~~~~~~~~~~~--   84 (208)
                      .+++....++||=.|  ++.|..++.+|+.+  +.+++.++.+++..+.+++   +.|....+..... +..+.+.+.  
T Consensus        53 ~L~~~~~~k~vLEiG--t~~GyStl~~a~al~~~g~i~tie~~~~~~~~A~~~~~~ag~~~~i~~~~G-da~e~l~~~~~  129 (219)
T d2avda1          53 NLARLIQAKKALDLG--TFTGYSALALALALPADGRVVTCEVDAQPPELGRPLWRQAEAEHKIDLRLK-PALETLDELLA  129 (219)
T ss_dssp             HHHHHTTCCEEEEEC--CTTSHHHHHHHTTSCTTCEEEEEESCSHHHHHHHHHHHHTTCTTTEEEEES-CHHHHHHHHHH
T ss_pred             HHHHccCCCeEEEEe--chhhHHHHHHHHhCCCCceEEEEeechhHHHHHHHHHHhcCccceEEEEEe-ehhhcchhhhh
Confidence            445566788999998  67788899999876  5699999999887766663   3455443333333 444444333  


Q ss_pred             --CCCCccEEEeCCC-c---hhHHHHHHhhccCCEEEEE
Q 028523           85 --FPEGINIYFENVG-G---KMLDAVLLNMRIQGRITLC  117 (208)
Q Consensus        85 --~~~~~d~v~d~~g-~---~~~~~~~~~l~~~G~~v~~  117 (208)
                        ..+.||+||--.. .   ..++.+++.|++||.++.-
T Consensus       130 ~~~~~~fD~ifiD~dk~~y~~~~~~~~~lL~~GGvii~D  168 (219)
T d2avda1         130 AGEAGTFDVAVVDADKENCSAYYERCLQLLRPGGILAVL  168 (219)
T ss_dssp             TTCTTCEEEEEECSCSTTHHHHHHHHHHHEEEEEEEEEE
T ss_pred             hcccCCccEEEEeCCHHHHHHHHHHHHHHhcCCcEEEEe
Confidence              2337999986554 2   2578999999999998763

>d1u2za_ c.66.1.31 (A:) Catalytic, N-terminal domain of histone methyltransferase Dot1l {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Catalytic, N-terminal domain of histone methyltransferase Dot1l
domain: Catalytic, N-terminal domain of histone methyltransferase Dot1l
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=97.18  E-value=0.0026  Score=47.87  Aligned_cols=108  Identities=20%  Similarity=0.304  Sum_probs=67.3

Q ss_pred             HHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHh----------cCCC---eeEecC
Q 028523            7 YAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGC-YVVGSAGSKDKVDLLKNK----------FGFD---EAFNYK   72 (208)
Q Consensus         7 ~~~l~~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g~-~v~~~~~s~~~~~~~~~~----------~g~~---~v~~~~   72 (208)
                      .+.+ +..++++|+++|=.|  +|+|..+.++|+..|+ +|++++.++...+.+++.          +|..   ..+...
T Consensus       206 ~~Il-~~l~Lkpgd~fLDLG--CG~G~~vl~aA~~~g~~~v~GIDiS~~~i~~Ak~~~~e~~~~~~~~g~~~~~~~~~~~  282 (406)
T d1u2za_         206 SDVY-QQCQLKKGDTFMDLG--SGVGNCVVQAALECGCALSFGCEIMDDASDLTILQYEELKKRCKLYGMRLNNVEFSLK  282 (406)
T ss_dssp             HHHH-HHTTCCTTCEEEEES--CTTSHHHHHHHHHHCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHTTBCCCCEEEEES
T ss_pred             HHHH-HHhCCCCCCEEEeCC--CCCcHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHHHHHhhhhhhhccccccceeeee
Confidence            3444 557899999988887  6889999999999987 899999998876666531          1211   111111


Q ss_pred             CCccHHHHHHhHCCCCccEEEeC-C--Cc---hhHHHHHHhhccCCEEEEEe
Q 028523           73 EEPDLDAALKRYFPEGINIYFEN-V--GG---KMLDAVLLNMRIQGRITLCG  118 (208)
Q Consensus        73 ~~~~~~~~~~~~~~~~~d~v~d~-~--g~---~~~~~~~~~l~~~G~~v~~g  118 (208)
                      .............. .+|+++-. .  +.   ..+..+++.|+|||+++..-
T Consensus       283 ~~f~~~~~~d~~~~-~adVV~inn~~f~~~l~~~L~ei~r~LKPGGrIVs~~  333 (406)
T d1u2za_         283 KSFVDNNRVAELIP-QCDVILVNNFLFDEDLNKKVEKILQTAKVGCKIISLK  333 (406)
T ss_dssp             SCSTTCHHHHHHGG-GCSEEEECCTTCCHHHHHHHHHHHTTCCTTCEEEESS
T ss_pred             echhhccccccccc-cceEEEEecccCchHHHHHHHHHHHhcCCCcEEEEec
Confidence            11000011111111 36777642 2  22   25778889999999998753

>d2bzga1 c.66.1.36 (A:17-245) Thiopurine S-methyltransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Thiopurine S-methyltransferase
domain: Thiopurine S-methyltransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.17  E-value=0.0015  Score=45.23  Aligned_cols=105  Identities=16%  Similarity=0.123  Sum_probs=67.3

Q ss_pred             HhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCee------------EecCCC-----
Q 028523           12 EVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEA------------FNYKEE-----   74 (208)
Q Consensus        12 ~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~v------------~~~~~~-----   74 (208)
                      ....++++.+||..|.  |.|..+..+++ .|++|++++.|+.-.+.++++.+....            ......     
T Consensus        39 ~~l~~~~~~rvLd~GC--G~G~~a~~LA~-~G~~V~gvD~S~~ai~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~  115 (229)
T d2bzga1          39 TFLKGKSGLRVFFPLC--GKAVEMKWFAD-RGHSVVGVEISELGIQEFFTEQNLSYSEEPITEIPGTKVFKSSSGNISLY  115 (229)
T ss_dssp             HHHTTCCSCEEEETTC--TTCTHHHHHHH-TTCEEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEETTSSEEEE
T ss_pred             HhcCCCCCCEEEEeCC--CCcHHHHHHHh-CCCcEEEEeCCHHHHHHHHHHhhccccccchhcccccceeeecCCcEEEE
Confidence            4456789999999984  45888888876 599999999999988888755443211            000000     


Q ss_pred             -ccHHHHHHhHCCCCccEEEeCCC-----c----hhHHHHHHhhccCCEEEEEecc
Q 028523           75 -PDLDAALKRYFPEGINIYFENVG-----G----KMLDAVLLNMRIQGRITLCGMI  120 (208)
Q Consensus        75 -~~~~~~~~~~~~~~~d~v~d~~g-----~----~~~~~~~~~l~~~G~~v~~g~~  120 (208)
                       .++.+ +.....+.+|+|+++.-     .    ..+..+.++|+|||+++.....
T Consensus       116 ~~d~~~-l~~~~~~~fd~i~~~~~l~~~~~~~r~~~~~~~~~~LkpgG~~~l~~~~  170 (229)
T d2bzga1         116 CCSIFD-LPRTNIGKFDMIWDRGALVAINPGDRKCYADTMFSLLGKKFQYLLCVLS  170 (229)
T ss_dssp             ESCGGG-GGGSCCCCEEEEEESSSTTTSCGGGHHHHHHHHHHTEEEEEEEEEEEEE
T ss_pred             Ecchhh-ccccccCceeEEEEEEEEEeccchhhHHHHHHHHhhcCCcceEEEEEcc
Confidence             01100 01111226899998642     1    2467889999999998766543

>d2hmva1 c.2.1.9 (A:7-140) Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn bsu222
species: Bacillus subtilis [TaxId: 1423]

Probab=97.14  E-value=0.0019  Score=40.70  Aligned_cols=91  Identities=18%  Similarity=0.140  Sum_probs=60.2

Q ss_pred             EEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeE-ecCCCccHHHHHHhHCCCCccEEEeCCCch
Q 028523           21 YVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAF-NYKEEPDLDAALKRYFPEGINIYFENVGGK   99 (208)
Q Consensus        21 ~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~v~-~~~~~~~~~~~~~~~~~~~~d~v~d~~g~~   99 (208)
                      +++|.|. |.+|..+++.+...|.+|++++.++++.+.++ ..|...++ |..+. +.   +.+..-..+|.++-+++.+
T Consensus         2 ~~iIiG~-G~~G~~la~~L~~~g~~vvvid~d~~~~~~~~-~~~~~~~~gd~~~~-~~---l~~a~i~~a~~vi~~~~~~   75 (134)
T d2hmva1           2 QFAVIGL-GRFGGSIVKELHRMGHEVLAVDINEEKVNAYA-SYATHAVIANATEE-NE---LLSLGIRNFEYVIVAIGAN   75 (134)
T ss_dssp             CEEEECC-SHHHHHHHHHHHHTTCCCEEEESCHHHHHHTT-TTCSEEEECCTTCT-TH---HHHHTGGGCSEEEECCCSC
T ss_pred             EEEEECC-CHHHHHHHHHHHHCCCeEEEecCcHHHHHHHH-HhCCcceeeecccc-hh---hhccCCccccEEEEEcCch
Confidence            4678885 99999999999999999999999999999988 66664433 33332 32   2222112578888888743


Q ss_pred             -h---HHHHHHhhccCCEEEEE
Q 028523          100 -M---LDAVLLNMRIQGRITLC  117 (208)
Q Consensus       100 -~---~~~~~~~l~~~G~~v~~  117 (208)
                       .   +......+.+..+++..
T Consensus        76 ~~~~~~~~~~~~~~~~~~iiar   97 (134)
T d2hmva1          76 IQASTLTTLLLKELDIPNIWVK   97 (134)
T ss_dssp             HHHHHHHHHHHHHTTCSEEEEE
T ss_pred             HHhHHHHHHHHHHcCCCcEEee
Confidence             2   22233334445565543

>d1ygya1 c.2.1.4 (A:99-282) Phosphoglycerate dehydrogenase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Phosphoglycerate dehydrogenase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=97.11  E-value=0.002  Score=43.13  Aligned_cols=89  Identities=22%  Similarity=0.194  Sum_probs=64.4

Q ss_pred             CCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHHHHhHCCCCccEEEeCC
Q 028523           17 KQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENV   96 (208)
Q Consensus        17 ~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~d~v~d~~   96 (208)
                      -.|.++.|.|. |.+|...+++++.+|.+|++.++...+....  ..+.. .   .   ++.+.+.+     .|+|.-++
T Consensus        42 l~~k~vgiiG~-G~IG~~va~~~~~fg~~v~~~d~~~~~~~~~--~~~~~-~---~---~l~ell~~-----sDiv~~~~  106 (184)
T d1ygya1          42 IFGKTVGVVGL-GRIGQLVAQRIAAFGAYVVAYDPYVSPARAA--QLGIE-L---L---SLDDLLAR-----ADFISVHL  106 (184)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHTTTCEEEEECTTSCHHHHH--HHTCE-E---C---CHHHHHHH-----CSEEEECC
T ss_pred             ccceeeeeccc-cchhHHHHHHhhhccceEEeecCCCChhHHh--hcCce-e---c---cHHHHHhh-----CCEEEEcC
Confidence            35789999995 9999999999999999999999765543333  33331 1   1   45555554     79998877


Q ss_pred             C-ch-----hHHHHHHhhccCCEEEEEecc
Q 028523           97 G-GK-----MLDAVLLNMRIQGRITLCGMI  120 (208)
Q Consensus        97 g-~~-----~~~~~~~~l~~~G~~v~~g~~  120 (208)
                      . .+     .-...+..|+++..++.++..
T Consensus       107 Plt~~T~~lin~~~l~~mk~~a~lIN~sRG  136 (184)
T d1ygya1         107 PKTPETAGLIDKEALAKTKPGVIIVNAARG  136 (184)
T ss_dssp             CCSTTTTTCBCHHHHTTSCTTEEEEECSCT
T ss_pred             CCCchhhhhhhHHHHhhhCCCceEEEecch
Confidence            6 33     235788899999999887663

>d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-glucose-4,6-dehydratase
species: Yersinia pseudotuberculosis [TaxId: 633]

Probab=97.11  E-value=0.00025  Score=52.54  Aligned_cols=38  Identities=26%  Similarity=0.407  Sum_probs=34.8

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHH
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDK   55 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~   55 (208)
                      +|.+|||+||+|-+|..+++.+...|.+|++++++..+
T Consensus         7 ~~KkILVTG~tGfIGs~lv~~Ll~~g~~V~~~~r~~~~   44 (356)
T d1rkxa_           7 QGKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPT   44 (356)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCSS
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCc
Confidence            57899999999999999999999999999999987664

>d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=97.09  E-value=0.00031  Score=49.13  Aligned_cols=37  Identities=16%  Similarity=0.155  Sum_probs=33.1

Q ss_pred             CCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHH
Q 028523           19 GEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDK   55 (208)
Q Consensus        19 g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~   55 (208)
                      ++++||+||++++|.+.++.+...|++|++++++++.
T Consensus         1 DK~alITGas~GIG~aiA~~la~~Ga~V~i~~~~~~~   37 (241)
T d1uaya_           1 ERSALVTGGASGLGRAAALALKARGYRVVVLDLRREG   37 (241)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCCS
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCccc
Confidence            3678999999999999999999999999999987653

>d1q0qa2 c.2.1.3 (A:1-125,A:275-300) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase
species: Escherichia coli [TaxId: 562]

Probab=97.02  E-value=0.011  Score=37.95  Aligned_cols=95  Identities=15%  Similarity=0.067  Sum_probs=61.7

Q ss_pred             EEEEecCCchHHHHHHHHHHHc--CCEEEEEeC--CHHHHHHHHHhcCCCeeEecCCCccH---H---------------
Q 028523           21 YVFVSAASGAVGQLVGQFAKLV--GCYVVGSAG--SKDKVDLLKNKFGFDEAFNYKEEPDL---D---------------   78 (208)
Q Consensus        21 ~vli~ga~g~vG~~a~qla~~~--g~~v~~~~~--s~~~~~~~~~~~g~~~v~~~~~~~~~---~---------------   78 (208)
                      +|.|+|+||++|..+..+.+..  .++|+..+.  +-+.+.....+|.+..++-.++. ..   .               
T Consensus         3 ~I~IlGsTGSIG~~tL~Vi~~~~d~f~v~~Lsa~~N~~~L~~q~~~f~pk~v~i~d~~-~~~~l~~~l~~~~~~~~~~~g   81 (151)
T d1q0qa2           3 QLTILGSTGSIGCSTLDVVRHNPEHFRVVALVAGKNVTRMVEQCLEFSPRYAVMDDEA-SAKLLKTMLQQQGSRTEVLSG   81 (151)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHCTTTEEEEEEEESSCHHHHHHHHHHHCCSEEEESSHH-HHHHHHHHHHHTTCCCEEEES
T ss_pred             eEEEEcCCcHHHHHHHHHHHhCCCCcEEEEEEecCcHHHHHHHHHHHhhcccccccHH-HHHHHHHHhhhhccccccccC
Confidence            6899999999999999999887  357776553  33333332227887766544332 11   1               


Q ss_pred             -HHHHhHCCC-CccEEEeCCCc-hhHHHHHHhhccCCEEEE
Q 028523           79 -AALKRYFPE-GINIYFENVGG-KMLDAVLLNMRIQGRITL  116 (208)
Q Consensus        79 -~~~~~~~~~-~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~  116 (208)
                       +.+.+.... .+|+|+.+..+ .-+...+..++.|-++.+
T Consensus        82 ~~~l~~~~~~~~~D~vi~AI~G~aGL~~t~~aik~gk~iaL  122 (151)
T d1q0qa2          82 QQAACDMAALEDVDQVMAAIVGAAGLLPTLAAIRAGKTILL  122 (151)
T ss_dssp             HHHHHHHHTCTTCCEEEECCSSGGGHHHHHHHHHTTCEEEE
T ss_pred             hHHHHHHhcCCCCCEEEEecCcccHHHHHHHHHhcCCeEEE
Confidence             112222222 68999998764 788888888888776544

>d1v8ba1 c.2.1.4 (A:235-397) S-adenosylhomocystein hydrolase {Plasmodium falciparum, isolate 3D7 [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: S-adenosylhomocystein hydrolase
species: Plasmodium falciparum, isolate 3D7 [TaxId: 5833]

Probab=97.02  E-value=0.0089  Score=38.70  Aligned_cols=100  Identities=18%  Similarity=0.159  Sum_probs=71.7

Q ss_pred             HHHHHHHhcC-CCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHHHHhH
Q 028523            6 AYAGFFEVCS-PKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRY   84 (208)
Q Consensus         6 A~~~l~~~~~-~~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~   84 (208)
                      .+.++.+... +-.|++++|.| =|-+|.-.++-+|.+|++|+++...+-+.-++. -=|. ++.      ...+.+.  
T Consensus         9 ~~d~i~r~t~~~laGk~vvV~G-YG~vGrG~A~~~rg~Ga~V~V~E~DPi~alqA~-mdGf-~v~------~~~~a~~--   77 (163)
T d1v8ba1           9 LPDGLMRATDFLISGKIVVICG-YGDVGKGCASSMKGLGARVYITEIDPICAIQAV-MEGF-NVV------TLDEIVD--   77 (163)
T ss_dssp             HHHHHHHHHCCCCTTSEEEEEC-CSHHHHHHHHHHHHHTCEEEEECSCHHHHHHHH-TTTC-EEC------CHHHHTT--
T ss_pred             HHHHHHHHhCceecCCEEEEec-ccccchhHHHHHHhCCCEEEEEecCchhhHHHH-hcCC-ccC------chhHccc--
Confidence            3444544434 46899999999 599999999999999999999998886543333 1232 232      3333333  


Q ss_pred             CCCCccEEEeCCCch--hHHHHHHhhccCCEEEEEec
Q 028523           85 FPEGINIYFENVGGK--MLDAVLLNMRIQGRITLCGM  119 (208)
Q Consensus        85 ~~~~~d~v~d~~g~~--~~~~~~~~l~~~G~~v~~g~  119 (208)
                         ..|+++-++|..  .-..-++.|+.+.-+...|-
T Consensus        78 ---~aDi~vTaTGn~~vI~~~h~~~MKdgaIl~N~GH  111 (163)
T d1v8ba1          78 ---KGDFFITCTGNVDVIKLEHLLKMKNNAVVGNIGH  111 (163)
T ss_dssp             ---TCSEEEECCSSSSSBCHHHHTTCCTTCEEEECSS
T ss_pred             ---cCcEEEEcCCCCccccHHHHHHhhCCeEEEeccc
Confidence               379999999964  35677889999888877765

>d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: TAT-interacting protein TIP30
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.01  E-value=0.00014  Score=50.81  Aligned_cols=75  Identities=20%  Similarity=0.204  Sum_probs=46.5

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCC--EEEEEeCCHHHHHHHHHhcCCCe-eEecCCCccHHHHHHhHCCCCccEEEe
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGC--YVVGSAGSKDKVDLLKNKFGFDE-AFNYKEEPDLDAALKRYFPEGINIYFE   94 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~--~v~~~~~s~~~~~~~~~~~g~~~-v~~~~~~~~~~~~~~~~~~~~~d~v~d   94 (208)
                      .+.+|||+||+|-+|...++.+...|.  +|++++|++.+...-. .-.... +.|..+.    +.+.+... ++|++|.
T Consensus        13 ~~k~IlItGaTG~iG~~l~~~Ll~~g~~~~v~~~~R~~~~~~~~~-~~~i~~~~~D~~~~----~~~~~~~~-~~d~vi~   86 (232)
T d2bkaa1          13 QNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEA-YKNVNQEVVDFEKL----DDYASAFQ-GHDVGFC   86 (232)
T ss_dssp             TCCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSGG-GGGCEEEECCGGGG----GGGGGGGS-SCSEEEE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHhCCCCCEEEEEecChhhhcccc-cceeeeeeeccccc----cccccccc-ccccccc
Confidence            456899999999999999988877775  8999998754322111 111111 2233221    11222112 5999999


Q ss_pred             CCCc
Q 028523           95 NVGG   98 (208)
Q Consensus        95 ~~g~   98 (208)
                      ++|.
T Consensus        87 ~~~~   90 (232)
T d2bkaa1          87 CLGT   90 (232)
T ss_dssp             CCCC
T ss_pred             cccc
Confidence            9874

>d1wzna1 c.66.1.43 (A:1-251) Hypothetical methyltransferase PH1305 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: CAC2371-like
domain: Hypothetical methyltransferase PH1305
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=96.97  E-value=0.0072  Score=42.05  Aligned_cols=96  Identities=16%  Similarity=0.140  Sum_probs=63.2

Q ss_pred             HHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhc---CCC-eeEecCCCccHHHHHHhHC
Q 028523           10 FFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKF---GFD-EAFNYKEEPDLDAALKRYF   85 (208)
Q Consensus        10 l~~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~---g~~-~v~~~~~~~~~~~~~~~~~   85 (208)
                      +.+....+++++||=.|+  |.|..+..+++ .|++|++++.|++-.+.+++.+   +.. ..+. .   ++    .++.
T Consensus        33 ~~~~~~~~~~~~iLDiGc--GtG~~~~~l~~-~~~~v~gvD~s~~mi~~a~~~~~~~~~~i~~~~-~---d~----~~l~  101 (251)
T d1wzna1          33 IFKEDAKREVRRVLDLAC--GTGIPTLELAE-RGYEVVGLDLHEEMLRVARRKAKERNLKIEFLQ-G---DV----LEIA  101 (251)
T ss_dssp             HHHHTCSSCCCEEEEETC--TTCHHHHHHHH-TTCEEEEEESCHHHHHHHHHHHHHTTCCCEEEE-S---CG----GGCC
T ss_pred             HHHHhcCCCCCEEEEeCC--CCCccchhhcc-cceEEEEEeeccccccccccccccccccchhee-h---hh----hhcc
Confidence            334445677889999985  34777777776 5889999999998877776432   322 1221 1   21    2222


Q ss_pred             C-CCccEEEeCCCc----------hhHHHHHHhhccCCEEEE
Q 028523           86 P-EGINIYFENVGG----------KMLDAVLLNMRIQGRITL  116 (208)
Q Consensus        86 ~-~~~d~v~d~~g~----------~~~~~~~~~l~~~G~~v~  116 (208)
                      . +.||+|+...+.          ..+..+.++|+|||.++.
T Consensus       102 ~~~~fD~I~~~~~~~~~~~~~~~~~~L~~~~~~LkpgG~lii  143 (251)
T d1wzna1         102 FKNEFDAVTMFFSTIMYFDEEDLRKLFSKVAEALKPGGVFIT  143 (251)
T ss_dssp             CCSCEEEEEECSSGGGGSCHHHHHHHHHHHHHHEEEEEEEEE
T ss_pred             cccccchHhhhhhhhhcCChHHHHHHHHHHHHHcCCCcEEEE
Confidence            2 279999875431          247788999999999875

>d2as0a2 c.66.1.51 (A:73-396) Hypothetical protein PH1915, middle and C-terminal domains {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Hypothetical protein PH1915, middle and C-terminal domains
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=96.97  E-value=0.0022  Score=46.99  Aligned_cols=101  Identities=16%  Similarity=0.142  Sum_probs=63.8

Q ss_pred             CCCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHH---hcCCCeeEecCCCccHHHHHHhH--CCCCc
Q 028523           16 PKQGEYVFVSAASGAVGQLVGQFAKLVGC-YVVGSAGSKDKVDLLKN---KFGFDEAFNYKEEPDLDAALKRY--FPEGI   89 (208)
Q Consensus        16 ~~~g~~vli~ga~g~vG~~a~qla~~~g~-~v~~~~~s~~~~~~~~~---~~g~~~v~~~~~~~~~~~~~~~~--~~~~~   89 (208)
                      +++|++||=.+  +++|..++.+++. |+ +|+.++.+++..+.+++   ..|....+..... +..+.+...  .+..|
T Consensus       143 ~~~g~~VLDl~--~g~G~~si~~a~~-ga~~V~~vD~s~~al~~a~~N~~~ngl~~~~~~~~~-d~~~~~~~~~~~~~~f  218 (324)
T d2as0a2         143 VQPGDRVLDVF--TYTGGFAIHAAIA-GADEVIGIDKSPRAIETAKENAKLNGVEDRMKFIVG-SAFEEMEKLQKKGEKF  218 (324)
T ss_dssp             CCTTCEEEETT--CTTTHHHHHHHHT-TCSEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEES-CHHHHHHHHHHTTCCE
T ss_pred             cCCCCeeeccc--Ccccchhhhhhhc-CCcEEEeecCCHHHHHHHHHHHHHcCCCccceeeec-hhhhhhHHHHhccCCC
Confidence            67899998665  3455555655554 66 89999999998887764   2344321222222 444444433  23379


Q ss_pred             cEEEeCCC----ch------------hHHHHHHhhccCCEEEEEecc
Q 028523           90 NIYFENVG----GK------------MLDAVLLNMRIQGRITLCGMI  120 (208)
Q Consensus        90 d~v~d~~g----~~------------~~~~~~~~l~~~G~~v~~g~~  120 (208)
                      |+|+--.+    +.            .+..++++|+|||.++.+...
T Consensus       219 D~Vi~DpP~~~~~~~~~~~~~~~y~~l~~~a~~ll~pGG~lv~~s~s  265 (324)
T d2as0a2         219 DIVVLDPPAFVQHEKDLKAGLRAYFNVNFAGLNLVKDGGILVTCSCS  265 (324)
T ss_dssp             EEEEECCCCSCSSGGGHHHHHHHHHHHHHHHHTTEEEEEEEEEEECC
T ss_pred             CchhcCCccccCCHHHHHHHHHHHHHHHHHHHHHcCCCcEEEEEeCC
Confidence            99985222    11            356778899999999987654

>d1uh5a_ c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=96.95  E-value=0.0021  Score=47.09  Aligned_cols=39  Identities=5%  Similarity=-0.056  Sum_probs=32.3

Q ss_pred             CCEEEEec--CCchHHHHHHHHHHHcCCEEEEEeCCHHHHH
Q 028523           19 GEYVFVSA--ASGAVGQLVGQFAKLVGCYVVGSAGSKDKVD   57 (208)
Q Consensus        19 g~~vli~g--a~g~vG~~a~qla~~~g~~v~~~~~s~~~~~   57 (208)
                      ++..||+|  ++.|+|.+.++.+...|++|+.+.++.....
T Consensus         2 ~kVAlITGaa~s~GIG~aiA~~la~~GA~V~i~~~~~~~~~   42 (329)
T d1uh5a_           2 EDICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYNI   42 (329)
T ss_dssp             CCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEECGGGHHH
T ss_pred             CcEEEEeCCCCCChHHHHHHHHHHHcCCEEEEEeCchhhhh
Confidence            56789999  5569999999999999999999987765443

>d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sulfolipid biosynthesis protein SQD1
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=96.94  E-value=0.0016  Score=48.78  Aligned_cols=32  Identities=19%  Similarity=0.095  Sum_probs=29.2

Q ss_pred             CCEEEEecCCchHHHHHHHHHHHcCCEEEEEe
Q 028523           19 GEYVFVSAASGAVGQLVGQFAKLVGCYVVGSA   50 (208)
Q Consensus        19 g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~   50 (208)
                      |.+|||+||+|-+|..+++.+...|.+|++++
T Consensus         1 g~kILVTGatGfiG~~lv~~Ll~~g~~V~~iD   32 (393)
T d1i24a_           1 GSRVMVIGGDGYCGWATALHLSKKNYEVCIVD   32 (393)
T ss_dssp             -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCcCEEEEEe
Confidence            67899999999999999999999999999986

>d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-tyvelose-2-epimerase
species: Salmonella typhi [TaxId: 90370]

Probab=96.93  E-value=0.0026  Score=46.31  Aligned_cols=73  Identities=18%  Similarity=0.313  Sum_probs=45.7

Q ss_pred             EEEEecCCchHHHHHHHHHHHcCCEEEEEeC-----CHHHHHHHHHhcCCCeeE--ecCCCccHHHHHHhHCCCCccEEE
Q 028523           21 YVFVSAASGAVGQLVGQFAKLVGCYVVGSAG-----SKDKVDLLKNKFGFDEAF--NYKEEPDLDAALKRYFPEGINIYF   93 (208)
Q Consensus        21 ~vli~ga~g~vG~~a~qla~~~g~~v~~~~~-----s~~~~~~~~~~~g~~~v~--~~~~~~~~~~~~~~~~~~~~d~v~   93 (208)
                      +|||+||+|-+|...++.+...|.+|+++++     +.++...+. ..+--..+  |..+...+.+.+...   ++|+||
T Consensus         2 KILVTGatGfIGs~lv~~Ll~~g~~V~~id~~~~~~~~~~~~~~~-~~~~~~~i~~Di~~~~~l~~~~~~~---~~d~Vi   77 (338)
T d1orra_           2 KLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLS-SLGNFEFVHGDIRNKNDVTRLITKY---MPDSCF   77 (338)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSTTHHHHHHHHH-TTCCCEEEECCTTCHHHHHHHHHHH---CCSEEE
T ss_pred             EEEEECCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhHHHHhh-ccCCcEEEEcccCCHHHHHHHHHhc---CCceEE
Confidence            6999999999999999988888999999862     112233343 33322222  333221233333222   589999


Q ss_pred             eCCC
Q 028523           94 ENVG   97 (208)
Q Consensus        94 d~~g   97 (208)
                      .+.+
T Consensus        78 h~aa   81 (338)
T d1orra_          78 HLAG   81 (338)
T ss_dssp             ECCC
T ss_pred             eecc
Confidence            9876

>d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Coenzyme F420H2:NADP+ oxidoreductase (FNO)
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=96.90  E-value=0.0011  Score=44.35  Aligned_cols=43  Identities=14%  Similarity=0.219  Sum_probs=37.1

Q ss_pred             EEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhc
Q 028523           21 YVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKF   63 (208)
Q Consensus        21 ~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~   63 (208)
                      +|.|+||+|++|.+.++.+...|++|++..|++++.+.+.+++
T Consensus         2 ki~vigGaG~iG~alA~~la~~G~~V~l~~R~~e~~~~l~~~i   44 (212)
T d1jaya_           2 RVALLGGTGNLGKGLALRLATLGHEIVVGSRREEKAEAKAAEY   44 (212)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTTTCEEEEEESSHHHHHHHHHHH
T ss_pred             EEEEEeCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHH
Confidence            4778888899999999999999999999999999877765443

>d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha-hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=96.90  E-value=0.00052  Score=48.44  Aligned_cols=35  Identities=14%  Similarity=0.263  Sum_probs=31.2

Q ss_pred             CEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHH
Q 028523           20 EYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKD   54 (208)
Q Consensus        20 ~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~   54 (208)
                      +.|||+||++++|++.++.+...|++|+.++++++
T Consensus         2 kVvlITGas~GIG~aiA~~la~~Ga~V~~~~~~~~   36 (257)
T d1fjha_           2 SIIVISGCATGIGAATRKVLEAAGHQIVGIDIRDA   36 (257)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECChH
Confidence            35899999999999999999999999999997653

>d1g8aa_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Fibrillarin homologue
domain: Fibrillarin homologue
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=96.89  E-value=0.0017  Score=44.98  Aligned_cols=99  Identities=15%  Similarity=0.149  Sum_probs=65.8

Q ss_pred             cCCCCCCEEEEecCCchHHHHHHHHHHHcC--CEEEEEeCCHHHHHHHHHhcCC---CeeEecCCCccHHHHHHhHCCCC
Q 028523           14 CSPKQGEYVFVSAASGAVGQLVGQFAKLVG--CYVVGSAGSKDKVDLLKNKFGF---DEAFNYKEEPDLDAALKRYFPEG   88 (208)
Q Consensus        14 ~~~~~g~~vli~ga~g~vG~~a~qla~~~g--~~v~~~~~s~~~~~~~~~~~g~---~~v~~~~~~~~~~~~~~~~~~~~   88 (208)
                      ..+++|++||=.|+  +.|..+..+++..|  .+|++++.+++..+.+++....   ...+..... . .+... .....
T Consensus        69 l~i~pG~~VLDlGa--GsG~~t~~la~~VG~~G~V~aVD~s~~~l~~a~~~a~~~~~~~~i~~d~~-~-~~~~~-~~~~~  143 (227)
T d1g8aa_          69 FPIKPGKSVLYLGI--ASGTTASHVSDIVGWEGKIFGIEFSPRVLRELVPIVEERRNIVPILGDAT-K-PEEYR-ALVPK  143 (227)
T ss_dssp             CCCCTTCEEEEETT--TSTTHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHSSCTTEEEEECCTT-C-GGGGT-TTCCC
T ss_pred             cccCCCCEEEEecc--CCCHHHHHHHHHhCCCCEEEEEeCcHHHHHHHHHHHHhcCCceEEEEECC-C-ccccc-ccccc
Confidence            46899999999985  55888999999886  4999999999988877743322   112211111 1 11111 11126


Q ss_pred             ccEEEeCCC-c----hhHHHHHHhhccCCEEEEE
Q 028523           89 INIYFENVG-G----KMLDAVLLNMRIQGRITLC  117 (208)
Q Consensus        89 ~d~v~d~~g-~----~~~~~~~~~l~~~G~~v~~  117 (208)
                      +|+++..+. .    ..+..+.+.|++||+++..
T Consensus       144 vD~i~~d~~~~~~~~~~l~~~~~~LkpgG~lvi~  177 (227)
T d1g8aa_         144 VDVIFEDVAQPTQAKILIDNAEVYLKRGGYGMIA  177 (227)
T ss_dssp             EEEEEECCCSTTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred             eEEEEEEccccchHHHHHHHHHHhcccCCeEEEE
Confidence            888876544 2    2577888999999998765

>d2g5ca2 c.2.1.6 (A:30-200) Prephenate dehydrogenase TyrA {Aquifex aeolicus [TaxId: 63363]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Aquifex aeolicus [TaxId: 63363]

Probab=96.87  E-value=0.011  Score=38.72  Aligned_cols=89  Identities=10%  Similarity=0.064  Sum_probs=61.3

Q ss_pred             EEEEecCCchHHHHHHHHHHHcCC--EEEEEeCCHHHHHHHHHhcCCC-eeEecCCCccHHHHHHhHCCCCccEEEeCCC
Q 028523           21 YVFVSAASGAVGQLVGQFAKLVGC--YVVGSAGSKDKVDLLKNKFGFD-EAFNYKEEPDLDAALKRYFPEGINIYFENVG   97 (208)
Q Consensus        21 ~vli~ga~g~vG~~a~qla~~~g~--~v~~~~~s~~~~~~~~~~~g~~-~v~~~~~~~~~~~~~~~~~~~~~d~v~d~~g   97 (208)
                      +|+|.| .|-+|...+..++..|.  +|++.+++++..+.++ +.|.. ......+.         ......|+|+-|+.
T Consensus         3 ~I~IIG-~G~mG~sla~~L~~~g~~~~I~~~D~~~~~~~~a~-~~~~~~~~~~~~~~---------~~~~~~dlIila~p   71 (171)
T d2g5ca2           3 NVLIVG-VGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAV-DLGIIDEGTTSIAK---------VEDFSPDFVMLSSP   71 (171)
T ss_dssp             EEEEES-CSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHH-HTTSCSEEESCGGG---------GGGTCCSEEEECSC
T ss_pred             EEEEEc-cCHHHHHHHHHHHhcCCCeEEEEEECChHHHHHHH-Hhhcchhhhhhhhh---------hhccccccccccCC
Confidence            689998 59999999988888875  8999999999999999 77753 33221110         01114789998888


Q ss_pred             chh----HHHHHHhhccCCEEEEEecc
Q 028523           98 GKM----LDAVLLNMRIQGRITLCGMI  120 (208)
Q Consensus        98 ~~~----~~~~~~~l~~~G~~v~~g~~  120 (208)
                      ...    +....+.+.++-.++.++..
T Consensus        72 ~~~~~~vl~~l~~~~~~~~ii~d~~s~   98 (171)
T d2g5ca2          72 VRTFREIAKKLSYILSEDATVTDQGSV   98 (171)
T ss_dssp             HHHHHHHHHHHHHHSCTTCEEEECCSC
T ss_pred             chhhhhhhhhhhccccccccccccccc
Confidence            543    34445566666666666553

>d1ve3a1 c.66.1.43 (A:2-227) Hypothetical protein PH0226 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: CAC2371-like
domain: Hypothetical protein PH0226
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=96.85  E-value=0.0035  Score=42.86  Aligned_cols=94  Identities=16%  Similarity=0.106  Sum_probs=61.6

Q ss_pred             CCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHh---cCCC-eeEecCCCccHHHHHHhHCCCCcc
Q 028523           15 SPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNK---FGFD-EAFNYKEEPDLDAALKRYFPEGIN   90 (208)
Q Consensus        15 ~~~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~---~g~~-~v~~~~~~~~~~~~~~~~~~~~~d   90 (208)
                      -++++++||=.|+  |.|..+..+++ .|.+|++++.|++..+.+++.   .+.. ..+..... ++     ....+.+|
T Consensus        34 ~l~~~~~ILDiGc--G~G~~~~~la~-~~~~v~giD~S~~~i~~ak~~~~~~~~~~~~~~~d~~-~l-----~~~~~~fD  104 (226)
T d1ve3a1          34 YMKKRGKVLDLAC--GVGGFSFLLED-YGFEVVGVDISEDMIRKAREYAKSRESNVEFIVGDAR-KL-----SFEDKTFD  104 (226)
T ss_dssp             SCCSCCEEEEETC--TTSHHHHHHHH-TTCEEEEEESCHHHHHHHHHHHHHTTCCCEEEECCTT-SC-----CSCTTCEE
T ss_pred             hcCCCCEEEEECC--CcchhhhhHhh-hhcccccccccccchhhhhhhhccccccccccccccc-cc-----cccCcCce
Confidence            3678899999985  45778888876 488999999999988777642   2322 12211111 11     11123699


Q ss_pred             EEEeCCC-----c-h---hHHHHHHhhccCCEEEEE
Q 028523           91 IYFENVG-----G-K---MLDAVLLNMRIQGRITLC  117 (208)
Q Consensus        91 ~v~d~~g-----~-~---~~~~~~~~l~~~G~~v~~  117 (208)
                      +|+....     . +   .+..+.+.|+|||+++..
T Consensus       105 ~I~~~~~l~~~~~~d~~~~l~~i~~~LkpgG~lii~  140 (226)
T d1ve3a1         105 YVIFIDSIVHFEPLELNQVFKEVRRVLKPSGKFIMY  140 (226)
T ss_dssp             EEEEESCGGGCCHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred             EEEEecchhhCChhHHHHHHHHHHHHcCcCcEEEEE
Confidence            9876432     1 1   477889999999998754

>d1gdha1 c.2.1.4 (A:101-291) D-glycerate dehydrogenase {Hyphomicrobium methylovorum [TaxId: 84]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-glycerate dehydrogenase
species: Hyphomicrobium methylovorum [TaxId: 84]

Probab=96.83  E-value=0.004  Score=41.84  Aligned_cols=90  Identities=10%  Similarity=0.015  Sum_probs=62.9

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHHHHhHCCCCccEEEeCCC
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVG   97 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~d~v~d~~g   97 (208)
                      .|.++.|+|. |.+|...+++++..|.+|+..++......... ..+..   .+ +  ++.+.+.+     .|+|..+..
T Consensus        46 ~g~tvgIiG~-G~IG~~va~~l~~fg~~v~~~d~~~~~~~~~~-~~~~~---~~-~--~l~~ll~~-----sD~v~l~~p  112 (191)
T d1gdha1          46 DNKTLGIYGF-GSIGQALAKRAQGFDMDIDYFDTHRASSSDEA-SYQAT---FH-D--SLDSLLSV-----SQFFSLNAP  112 (191)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHTTTCEEEEECSSCCCHHHHH-HHTCE---EC-S--SHHHHHHH-----CSEEEECCC
T ss_pred             cccceEEeec-ccchHHHHHHHHhhccccccccccccccchhh-ccccc---cc-C--CHHHHHhh-----CCeEEecCC
Confidence            4789999995 99999999999999999999986554333322 22221   11 1  45555544     688887765


Q ss_pred             -ch-----hHHHHHHhhccCCEEEEEecc
Q 028523           98 -GK-----MLDAVLLNMRIQGRITLCGMI  120 (208)
Q Consensus        98 -~~-----~~~~~~~~l~~~G~~v~~g~~  120 (208)
                       .+     .-...+..|+++..+|.++..
T Consensus       113 lt~~T~~li~~~~l~~mk~~a~lIN~sRG  141 (191)
T d1gdha1         113 STPETRYFFNKATIKSLPQGAIVVNTARG  141 (191)
T ss_dssp             CCTTTTTCBSHHHHTTSCTTEEEEECSCG
T ss_pred             CCchHhheecHHHhhCcCCccEEEecCCc
Confidence             22     235788889999988887653

>d1mx3a1 c.2.1.4 (A:126-318) Transcription corepressor CtbP {Human (Homo sapiens), Ctbp1 [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Transcription corepressor CtbP
species: Human (Homo sapiens), Ctbp1 [TaxId: 9606]

Probab=96.78  E-value=0.003  Score=42.58  Aligned_cols=89  Identities=20%  Similarity=0.149  Sum_probs=62.4

Q ss_pred             CCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHHHHhHCCCCccEEEeCC
Q 028523           17 KQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENV   96 (208)
Q Consensus        17 ~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~d~v~d~~   96 (208)
                      -.|.++.|.| .|.+|...+++++.+|++|+..++...... .. ..+...+     . ++.+.++.     .|+|.-+.
T Consensus        47 L~gktvgIiG-~G~IG~~va~~l~~fg~~v~~~d~~~~~~~-~~-~~~~~~~-----~-~l~~ll~~-----sD~i~~~~  112 (193)
T d1mx3a1          47 IRGETLGIIG-LGRVGQAVALRAKAFGFNVLFYDPYLSDGV-ER-ALGLQRV-----S-TLQDLLFH-----SDCVTLHC  112 (193)
T ss_dssp             CTTCEEEEEC-CSHHHHHHHHHHHTTTCEEEEECTTSCTTH-HH-HHTCEEC-----S-SHHHHHHH-----CSEEEECC
T ss_pred             eeCceEEEec-cccccccceeeeeccccceeeccCcccccc-hh-hhccccc-----c-chhhcccc-----CCEEEEee
Confidence            4678999999 599999999999999999999986644322 22 3343211     1 45554443     68887766


Q ss_pred             C-ch-----hHHHHHHhhccCCEEEEEec
Q 028523           97 G-GK-----MLDAVLLNMRIQGRITLCGM  119 (208)
Q Consensus        97 g-~~-----~~~~~~~~l~~~G~~v~~g~  119 (208)
                      . .+     .-...+..|+++..++.++.
T Consensus       113 plt~~T~~li~~~~l~~mk~~a~lIN~sR  141 (193)
T d1mx3a1         113 GLNEHNHHLINDFTVKQMRQGAFLVNTAR  141 (193)
T ss_dssp             CCCTTCTTSBSHHHHTTSCTTEEEEECSC
T ss_pred             cccccchhhhhHHHHhccCCCCeEEecCC
Confidence            5 22     23567888999988888765

>d1vm6a3 c.2.1.3 (A:1-96,A:183-214) Dihydrodipicolinate reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=96.78  E-value=0.0014  Score=41.07  Aligned_cols=73  Identities=11%  Similarity=0.049  Sum_probs=47.8

Q ss_pred             EEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHHHHhHCCCCccEEEeCCCchh
Q 028523           21 YVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVGGKM  100 (208)
Q Consensus        21 ~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~  100 (208)
                      +|.|+|++|-+|++..+++...+.+++........    . .+                       ..+|+++|++..+.
T Consensus         2 ki~i~G~~GrMG~~i~~~~~~~~~~l~~~id~~~~----~-~~-----------------------~~~DVvIDFS~p~~   53 (128)
T d1vm6a3           2 KYGIVGYSGRMGQEIQKVFSEKGHELVLKVDVNGV----E-EL-----------------------DSPDVVIDFSSPEA   53 (128)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEEETTEE----E-EC-----------------------SCCSEEEECSCGGG
T ss_pred             EEEEECCCCHHHHHHHHHHhcCCCeEEEEECCCcH----H-Hh-----------------------ccCCEEEEecCHHH
Confidence            58899999999999999998888877655421100    0 00                       13678888877766


Q ss_pred             HHHHHHhhccCCEEEEEeccc
Q 028523          101 LDAVLLNMRIQGRITLCGMIS  121 (208)
Q Consensus       101 ~~~~~~~l~~~G~~v~~g~~~  121 (208)
                      ....++.+...+.=+.+|.+.
T Consensus        54 ~~~~l~~~~~~~~p~ViGTTG   74 (128)
T d1vm6a3          54 LPKTVDLCKKYRAGLVLGTTA   74 (128)
T ss_dssp             HHHHHHHHHHHTCEEEECCCS
T ss_pred             HHHHHHHHHhcCCCEEEEcCC
Confidence            666666555555445555543

>d2naca1 c.2.1.4 (A:148-335) Formate dehydrogenase {Pseudomonas sp., strain 101 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Formate dehydrogenase
species: Pseudomonas sp., strain 101 [TaxId: 306]

Probab=96.77  E-value=0.0034  Score=42.13  Aligned_cols=90  Identities=11%  Similarity=-0.031  Sum_probs=63.6

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHHHHhHCCCCccEEEeCCC
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVG   97 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~d~v~d~~g   97 (208)
                      .+.++.|.| .|.+|...+++++.+|.+|+..++......... ..+....     . ++.+.+++     .|+|.-+..
T Consensus        43 ~~~~vgiiG-~G~IG~~va~~l~~fg~~v~~~d~~~~~~~~~~-~~~~~~~-----~-~l~~~l~~-----sD~v~~~~p  109 (188)
T d2naca1          43 EAMHVGTVA-AGRIGLAVLRRLAPFDVHLHYTDRHRLPESVEK-ELNLTWH-----A-TREDMYPV-----CDVVTLNCP  109 (188)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHGGGTCEEEEECSSCCCHHHHH-HHTCEEC-----S-SHHHHGGG-----CSEEEECSC
T ss_pred             cccceeecc-ccccchhhhhhhhccCceEEEEeeccccccccc-ccccccc-----C-CHHHHHHh-----ccchhhccc
Confidence            578999999 599999999999999999999997654444444 4443211     1 34444332     788887666


Q ss_pred             -ch-----hHHHHHHhhccCCEEEEEecc
Q 028523           98 -GK-----MLDAVLLNMRIQGRITLCGMI  120 (208)
Q Consensus        98 -~~-----~~~~~~~~l~~~G~~v~~g~~  120 (208)
                       .+     .-...+..|+++..+|.++..
T Consensus       110 lt~~T~~li~~~~l~~mk~ga~lIN~aRG  138 (188)
T d2naca1         110 LHPETEHMINDETLKLFKRGAYIVNTARG  138 (188)
T ss_dssp             CCTTTTTCBSHHHHTTSCTTEEEEECSCG
T ss_pred             ccccchhhhHHHHHHhCCCCCEEEecCch
Confidence             33     246788889888888887653

>d1xvaa_ c.66.1.5 (A:) Glycine N-methyltransferase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Glycine N-methyltransferase
domain: Glycine N-methyltransferase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=96.77  E-value=0.0009  Score=48.26  Aligned_cols=99  Identities=12%  Similarity=0.030  Sum_probs=61.6

Q ss_pred             CCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhc---CCCe---eEecCCCccHHHHHHhHCC-C
Q 028523           15 SPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKF---GFDE---AFNYKEEPDLDAALKRYFP-E   87 (208)
Q Consensus        15 ~~~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~---g~~~---v~~~~~~~~~~~~~~~~~~-~   87 (208)
                      +.+.+.+||=.|+  |.|..++.+++. |++|++++.|++-.+.+++..   +...   ..+..+. ++...-..... +
T Consensus        53 ~~~~~~~vLD~Gc--G~G~~~~~la~~-g~~v~gvD~S~~ml~~A~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~  128 (292)
T d1xvaa_          53 RQHGCHRVLDVAC--GTGVDSIMLVEE-GFSVTSVDASDKMLKYALKERWNRRKEPAFDKWVIEEA-NWLTLDKDVPAGD  128 (292)
T ss_dssp             HHTTCCEEEESSC--TTSHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHTTTSHHHHTCEEEEC-CGGGHHHHSCCTT
T ss_pred             hhcCCCEEEEecC--CCcHHHHHHHHc-CCeeeeccCchHHHHHHHHHHHhcccccccceeeeeec-cccccccccCCCC
Confidence            3456789998884  568888888875 899999999999777776321   2110   0001111 22111122222 2


Q ss_pred             CccEEEeCCCc---------------hhHHHHHHhhccCCEEEEE
Q 028523           88 GINIYFENVGG---------------KMLDAVLLNMRIQGRITLC  117 (208)
Q Consensus        88 ~~d~v~d~~g~---------------~~~~~~~~~l~~~G~~v~~  117 (208)
                      ++|.|+.....               ..+..+.+.|+|||.++.-
T Consensus       129 ~fd~v~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~li~~  173 (292)
T d1xvaa_         129 GFDAVICLGNSFAHLPDSKGDQSEHRLALKNIASMVRPGGLLVID  173 (292)
T ss_dssp             CEEEEEECSSCGGGSCCTTSSSHHHHHHHHHHHHTEEEEEEEEEE
T ss_pred             CceEEEEecCchhhcCCcccChHHHHHHHHHHHHHcCcCcEEEEe
Confidence            79999864211               1578899999999998763

>d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: DTDP-4-dehydrorhamnose reductase RfbD
species: Clostridium acetobutylicum [TaxId: 1488]

Probab=96.77  E-value=0.0018  Score=45.98  Aligned_cols=32  Identities=16%  Similarity=0.236  Sum_probs=29.5

Q ss_pred             EEEEecCCchHHHHHHHHHHHcCCEEEEEeCC
Q 028523           21 YVFVSAASGAVGQLVGQFAKLVGCYVVGSAGS   52 (208)
Q Consensus        21 ~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s   52 (208)
                      +|||+||+|-+|..++..++..|.+|++++++
T Consensus         3 KIlItGasGfiG~~l~~~L~~~g~~Vi~~~r~   34 (281)
T d1vl0a_           3 KILITGANGQLGREIQKQLKGKNVEVIPTDVQ   34 (281)
T ss_dssp             EEEEESTTSHHHHHHHHHHTTSSEEEEEECTT
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCEEEEeech
Confidence            58999999999999999999999999999865

>d1nw3a_ c.66.1.31 (A:) Catalytic, N-terminal domain of histone methyltransferase Dot1l {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Catalytic, N-terminal domain of histone methyltransferase Dot1l
domain: Catalytic, N-terminal domain of histone methyltransferase Dot1l
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.76  E-value=0.026  Score=41.13  Aligned_cols=102  Identities=18%  Similarity=0.196  Sum_probs=66.3

Q ss_pred             HHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHH----------hcCCC----eeEecCCC
Q 028523           10 FFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGC-YVVGSAGSKDKVDLLKN----------KFGFD----EAFNYKEE   74 (208)
Q Consensus        10 l~~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g~-~v~~~~~s~~~~~~~~~----------~~g~~----~v~~~~~~   74 (208)
                      +.+..++++++.||=.|  .|.|..+.++|+..++ ++++++.++...+.+++          .+|..    ..+..+-.
T Consensus       143 ~~~~~~l~~~~~vlD~G--cG~G~~~~~~a~~~~~~~~~Gid~s~~~~~~a~~~~~~~~~~~~~~g~~~~~i~~~~gd~~  220 (328)
T d1nw3a_         143 MIDEIKMTDDDLFVDLG--SGVGQVVLQVAAATNCKHHYGVEKADIPAKYAETMDREFRKWMKWYGKKHAEYTLERGDFL  220 (328)
T ss_dssp             HHHHSCCCTTCEEEEET--CTTSHHHHHHHHHCCCSEEEEEECSHHHHHHHHHHHHHHHHHHHHHTCCCCCEEEEECCTT
T ss_pred             HHHHcCCCCCCEEEEcC--CCCCHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHhhhccccCCceEEEECccc
Confidence            33667899999998888  5789999999999988 89999999886655542          12221    12211111


Q ss_pred             -ccHHHHHHhHCCCCccEEEeC-C--Cc---hhHHHHHHhhccCCEEEEEe
Q 028523           75 -PDLDAALKRYFPEGINIYFEN-V--GG---KMLDAVLLNMRIQGRITLCG  118 (208)
Q Consensus        75 -~~~~~~~~~~~~~~~d~v~d~-~--g~---~~~~~~~~~l~~~G~~v~~g  118 (208)
                       ..+.+.+.+     +|+|+-. .  +.   ..+...++.|+|||+++..-
T Consensus       221 ~~~~~~~~~~-----advi~~~~~~f~~~~~~~l~e~~r~LKpGg~iv~~~  266 (328)
T d1nw3a_         221 SEEWRERIAN-----TSVIFVNNFAFGPEVDHQLKERFANMKEGGRIVSSK  266 (328)
T ss_dssp             SHHHHHHHHH-----CSEEEECCTTTCHHHHHHHHHHHTTCCTTCEEEESS
T ss_pred             ccccccccCc-----ceEEEEcceecchHHHHHHHHHHHhCCCCcEEEEec
Confidence             023332222     5777642 2  11   24677888999999998754

>d1nvmb1 c.2.1.3 (B:1-131,B:287-312) Acetaldehyde dehydrogenase (acylating) {Pseudomonas sp. [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Acetaldehyde dehydrogenase (acylating)
species: Pseudomonas sp. [TaxId: 306]

Probab=96.73  E-value=0.013  Score=37.90  Aligned_cols=92  Identities=14%  Similarity=0.170  Sum_probs=54.5

Q ss_pred             EEEEecCCchHHH-HHHHHHHHcC-CEEEEEeC-CHH--HHHHHHHhcCCCeeEecCCCccHHHHHHhHCCCCccEEEeC
Q 028523           21 YVFVSAASGAVGQ-LVGQFAKLVG-CYVVGSAG-SKD--KVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFEN   95 (208)
Q Consensus        21 ~vli~ga~g~vG~-~a~qla~~~g-~~v~~~~~-s~~--~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~d~v~d~   95 (208)
                      ++.|.| +|.+|. ..+++.+... .+++.++. +.+  ...+++ ++|.....  .   .+.+.+......++|+||++
T Consensus         6 rvaIIG-aG~ig~~~~~~~l~~~~~~el~avas~~~~~~~~~~a~-~~~i~~~~--~---~~d~l~~~~~~~~iDiVf~A   78 (157)
T d1nvmb1           6 KVAIIG-SGNIGTDLMIKVLRNAKYLEMGAMVGIDAASDGLARAQ-RMGVTTTY--A---GVEGLIKLPEFADIDFVFDA   78 (157)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHHHCSSEEEEEEECSCTTCHHHHHHH-HTTCCEES--S---HHHHHHHSGGGGGEEEEEEC
T ss_pred             EEEEEc-CcHHHHHHHHHHHhhCCcceEEEEEecchhccchhhhh-hcCCcccc--c---ceeeeeecccccccCEEEEc
Confidence            688999 799997 4677877654 47877764 333  345666 77764331  1   22222222222269999999


Q ss_pred             CC-chhHH--HHHHhhccCCEEEEEec
Q 028523           96 VG-GKMLD--AVLLNMRIQGRITLCGM  119 (208)
Q Consensus        96 ~g-~~~~~--~~~~~l~~~G~~v~~g~  119 (208)
                      +. +....  ...+.++.|-+++....
T Consensus        79 Tpag~h~~~~~~~~aa~~G~~VID~s~  105 (157)
T d1nvmb1          79 TSASAHVQNEALLRQAKPGIRLIDLTP  105 (157)
T ss_dssp             SCHHHHHHHHHHHHHHCTTCEEEECST
T ss_pred             CCchhHHHhHHHHHHHHcCCEEEEccc
Confidence            88 44444  33445666666665543

>d1nt2a_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Fibrillarin homologue
domain: Fibrillarin homologue
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=96.71  E-value=0.0021  Score=44.00  Aligned_cols=100  Identities=12%  Similarity=0.114  Sum_probs=62.4

Q ss_pred             cCCCCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHh---cCCCeeEecCCCccHHHHHHhHCCCCc
Q 028523           14 CSPKQGEYVFVSAASGAVGQLVGQFAKLVGC-YVVGSAGSKDKVDLLKNK---FGFDEAFNYKEEPDLDAALKRYFPEGI   89 (208)
Q Consensus        14 ~~~~~g~~vli~ga~g~vG~~a~qla~~~g~-~v~~~~~s~~~~~~~~~~---~g~~~v~~~~~~~~~~~~~~~~~~~~~   89 (208)
                      ..+++|++||=.|+  |.|..+..+++..+- +|++++.+++..+.+++.   .+-...+..+.. +.. .. ......+
T Consensus        52 l~lkpg~~VLDlGc--G~G~~~~~la~~v~~g~V~gvDis~~~i~~a~~~a~~~~ni~~i~~d~~-~~~-~~-~~~~~~v  126 (209)
T d1nt2a_          52 LKLRGDERVLYLGA--ASGTTVSHLADIVDEGIIYAVEYSAKPFEKLLELVRERNNIIPLLFDAS-KPW-KY-SGIVEKV  126 (209)
T ss_dssp             CCCCSSCEEEEETC--TTSHHHHHHHHHTTTSEEEEECCCHHHHHHHHHHHHHCSSEEEECSCTT-CGG-GT-TTTCCCE
T ss_pred             CCCCCCCEEEEeCC--cCCHHHHHHHHhccCCeEEEEeCCHHHHHHHHHHhhccCCceEEEeecc-Ccc-cc-ccccceE
Confidence            46899999999986  446677778887754 999999999887766532   222122111111 110 00 0011157


Q ss_pred             cEEEeCCC-c----hhHHHHHHhhccCCEEEEEe
Q 028523           90 NIYFENVG-G----KMLDAVLLNMRIQGRITLCG  118 (208)
Q Consensus        90 d~v~d~~g-~----~~~~~~~~~l~~~G~~v~~g  118 (208)
                      |+++.... .    ..+..+.+.|++||.++..-
T Consensus       127 d~v~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~  160 (209)
T d1nt2a_         127 DLIYQDIAQKNQIEILKANAEFFLKEKGEVVIMV  160 (209)
T ss_dssp             EEEEECCCSTTHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred             EEEEecccChhhHHHHHHHHHHHhccCCeEEEEE
Confidence            77766443 1    25778889999999987653

>d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Escherichia coli [TaxId: 562]

Probab=96.69  E-value=0.0073  Score=44.12  Aligned_cols=73  Identities=16%  Similarity=0.196  Sum_probs=45.4

Q ss_pred             EEEEecCCchHHHHHHHHHHHcCCEEEEEeC----CHHHHHHHHHhcCCC--ee--EecCCCccHHHHHHhHCCCCccEE
Q 028523           21 YVFVSAASGAVGQLVGQFAKLVGCYVVGSAG----SKDKVDLLKNKFGFD--EA--FNYKEEPDLDAALKRYFPEGINIY   92 (208)
Q Consensus        21 ~vli~ga~g~vG~~a~qla~~~g~~v~~~~~----s~~~~~~~~~~~g~~--~v--~~~~~~~~~~~~~~~~~~~~~d~v   92 (208)
                      +|||+||+|-+|...+..+...|.+|+++++    ..+...... .+..+  ..  .|..+...+.+.+++   .++|+|
T Consensus         2 KiLItG~tGfIG~~l~~~L~~~g~~V~~~d~~~~~~~~~~~~~~-~~~~~~~~~~~~Dl~d~~~l~~~~~~---~~~d~V   77 (338)
T d1udca_           2 RVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIE-RLGGKHPTFVEGDIRNEALMTEILHD---HAIDTV   77 (338)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTTHHHHHH-HHHTSCCEEEECCTTCHHHHHHHHHH---TTCSEE
T ss_pred             EEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCCcchhhHHHHH-hhcCCCCEEEEeecCCHHHHHHHHhc---cCCCEE
Confidence            5999999999999999999889999999874    222223222 22211  12  233332122222322   269999


Q ss_pred             EeCCC
Q 028523           93 FENVG   97 (208)
Q Consensus        93 ~d~~g   97 (208)
                      |.+++
T Consensus        78 iHlAa   82 (338)
T d1udca_          78 IHFAG   82 (338)
T ss_dssp             EECCS
T ss_pred             EECCC
Confidence            99875

>d1p91a_ c.66.1.33 (A:) rRNA methyltransferase RlmA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: rRNA methyltransferase RlmA
domain: rRNA methyltransferase RlmA
species: Escherichia coli [TaxId: 562]

Probab=96.67  E-value=0.0044  Score=43.98  Aligned_cols=96  Identities=9%  Similarity=0.037  Sum_probs=66.4

Q ss_pred             CCCCCEEEEecCCchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHHHHhHCCCCccEEEe
Q 028523           16 PKQGEYVFVSAASGAVGQLVGQFAKLV-GCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFE   94 (208)
Q Consensus        16 ~~~g~~vli~ga~g~vG~~a~qla~~~-g~~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~d~v~d   94 (208)
                      ..++.+||=.|.  |.|..+..+++.. +.++++++.|++-.+.+++...-...+..+-. ++     .+.++.||+|+.
T Consensus        82 ~~~~~~iLDiGc--G~G~~~~~l~~~~~~~~~~giD~s~~~~~~a~~~~~~~~~~~~d~~-~l-----~~~~~sfD~v~~  153 (268)
T d1p91a_          82 DDKATAVLDIGC--GEGYYTHAFADALPEITTFGLDVSKVAIKAAAKRYPQVTFCVASSH-RL-----PFSDTSMDAIIR  153 (268)
T ss_dssp             CTTCCEEEEETC--TTSTTHHHHHHTCTTSEEEEEESCHHHHHHHHHHCTTSEEEECCTT-SC-----SBCTTCEEEEEE
T ss_pred             CCCCCEEEEeCC--CCcHHHHHHHHHCCCCEEEEecchHhhhhhhhcccccccceeeehh-hc-----cCCCCCEEEEee
Confidence            467788988884  5577777888775 67999999999988888844322222211111 11     112236999997


Q ss_pred             CCCchhHHHHHHhhccCCEEEEEec
Q 028523           95 NVGGKMLDAVLLNMRIQGRITLCGM  119 (208)
Q Consensus        95 ~~g~~~~~~~~~~l~~~G~~v~~g~  119 (208)
                      ......+.++.+.|+|||.++....
T Consensus       154 ~~~~~~~~e~~rvLkpgG~l~~~~p  178 (268)
T d1p91a_         154 IYAPCKAEELARVVKPGGWVITATP  178 (268)
T ss_dssp             ESCCCCHHHHHHHEEEEEEEEEEEE
T ss_pred             cCCHHHHHHHHHHhCCCcEEEEEee
Confidence            7666678899999999999987643

>d1qp8a1 c.2.1.4 (A:83-263) Putative formate dehydrogenase {Archaeon Pyrobaculum aerophilum [TaxId: 13773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Putative formate dehydrogenase
species: Archaeon Pyrobaculum aerophilum [TaxId: 13773]

Probab=96.64  E-value=0.0044  Score=41.24  Aligned_cols=83  Identities=24%  Similarity=0.227  Sum_probs=60.3

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHHHHhHCCCCccEEEeCCC
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVG   97 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~d~v~d~~g   97 (208)
                      .|.+|.|+|. |.+|...+++++.+|.+|++.++++.+        +.....    . ++.+.++     ..|+|+.++.
T Consensus        41 ~gk~vgIiG~-G~IG~~va~~l~~~g~~v~~~d~~~~~--------~~~~~~----~-~l~ell~-----~sDiv~~~~p  101 (181)
T d1qp8a1          41 QGEKVAVLGL-GEIGTRVGKILAALGAQVRGFSRTPKE--------GPWRFT----N-SLEEALR-----EARAAVCALP  101 (181)
T ss_dssp             TTCEEEEESC-STHHHHHHHHHHHTTCEEEEECSSCCC--------SSSCCB----S-CSHHHHT-----TCSEEEECCC
T ss_pred             cCceEEEecc-ccccccceeeeeccccccccccccccc--------cceeee----e-chhhhhh-----ccchhhcccc
Confidence            5789999995 999999999999999999999876432        111111    1 3333333     2799988776


Q ss_pred             -ch-----hHHHHHHhhccCCEEEEEec
Q 028523           98 -GK-----MLDAVLLNMRIQGRITLCGM  119 (208)
Q Consensus        98 -~~-----~~~~~~~~l~~~G~~v~~g~  119 (208)
                       .+     .-...+..|+++..+|.++.
T Consensus       102 l~~~t~~li~~~~l~~mk~~ailIN~~R  129 (181)
T d1qp8a1         102 LNKHTRGLVKYQHLALMAEDAVFVNVGR  129 (181)
T ss_dssp             CSTTTTTCBCHHHHTTSCTTCEEEECSC
T ss_pred             cccccccccccceeeeccccceEEeccc
Confidence             32     23678889999999998765

>d1vpda2 c.2.1.6 (A:3-163) Hydroxyisobutyrate dehydrogenase {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Salmonella typhimurium [TaxId: 90371]

Probab=96.61  E-value=0.023  Score=36.78  Aligned_cols=86  Identities=10%  Similarity=0.067  Sum_probs=59.3

Q ss_pred             EEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHHHHhHCCCCccEEEeCCC-ch
Q 028523           21 YVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVG-GK   99 (208)
Q Consensus        21 ~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~d~v~d~~g-~~   99 (208)
                      +|-|.| .|.+|...++-+...|.+|++.++++++.+.+. +.+....     . +..+.+++     .|++|-|+. .+
T Consensus         2 kIgiIG-lG~MG~~~A~~L~~~G~~V~~~d~~~~~~~~~~-~~~~~~~-----~-~~~e~~~~-----~d~ii~~v~~~~   68 (161)
T d1vpda2           2 KVGFIG-LGIMGKPMSKNLLKAGYSLVVSDRNPEAIADVI-AAGAETA-----S-TAKAIAEQ-----CDVIITMLPNSP   68 (161)
T ss_dssp             EEEEEC-CSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHH-HTTCEEC-----S-SHHHHHHH-----CSEEEECCSSHH
T ss_pred             EEEEEe-hhHHHHHHHHHHHHCCCeEEEEeCCcchhHHHH-Hhhhhhc-----c-cHHHHHhC-----CCeEEEEcCCHH
Confidence            477888 599999988877788999999999999999888 6665321     1 33444443     788888886 34


Q ss_pred             hHHH-------HHHhhccCCEEEEEec
Q 028523          100 MLDA-------VLLNMRIQGRITLCGM  119 (208)
Q Consensus       100 ~~~~-------~~~~l~~~G~~v~~g~  119 (208)
                      ....       ....++++-.++..+.
T Consensus        69 ~v~~v~~~~~~~~~~~~~g~iiid~sT   95 (161)
T d1vpda2          69 HVKEVALGENGIIEGAKPGTVLIDMSS   95 (161)
T ss_dssp             HHHHHHHSTTCHHHHCCTTCEEEECSC
T ss_pred             HHHHHHhCCcchhhccCCCCEEEECCC
Confidence            4333       3344556666666544

>d1c1da1 c.2.1.7 (A:149-349) Phenylalanine dehydrogenase {Rhodococcus sp., M4 [TaxId: 1831]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Phenylalanine dehydrogenase
species: Rhodococcus sp., M4 [TaxId: 1831]

Probab=96.58  E-value=0.0041  Score=42.14  Aligned_cols=80  Identities=18%  Similarity=0.257  Sum_probs=58.0

Q ss_pred             CCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHHHHhHCCCCccEEEeCC
Q 028523           17 KQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENV   96 (208)
Q Consensus        17 ~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~d~v~d~~   96 (208)
                      -.|.+|.|.| .|.+|..+++.+...|++|++++.+.++..... .+|...+ +..   +       +....+|+.+-|.
T Consensus        25 L~gk~v~IqG-~G~VG~~~A~~L~~~Gakvvv~d~d~~~~~~~~-~~g~~~~-~~~---~-------~~~~~~DI~iPcA   91 (201)
T d1c1da1          25 LDGLTVLVQG-LGAVGGSLASLAAEAGAQLLVADTDTERVAHAV-ALGHTAV-ALE---D-------VLSTPCDVFAPCA   91 (201)
T ss_dssp             STTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHH-HTTCEEC-CGG---G-------GGGCCCSEEEECS
T ss_pred             CCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEecchHHHHHHHH-hhccccc-Ccc---c-------cccccceeeeccc
Confidence            3688999998 699999999999999999999999888888888 7776432 211   1       1122588888776


Q ss_pred             Cc-hhHHHHHHhhc
Q 028523           97 GG-KMLDAVLLNMR  109 (208)
Q Consensus        97 g~-~~~~~~~~~l~  109 (208)
                      .+ ..-....+.++
T Consensus        92 ~~~~I~~~~a~~i~  105 (201)
T d1c1da1          92 MGGVITTEVARTLD  105 (201)
T ss_dssp             CSCCBCHHHHHHCC
T ss_pred             ccccccHHHHhhhh
Confidence            53 33344555553

>d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=96.56  E-value=0.0054  Score=44.64  Aligned_cols=33  Identities=18%  Similarity=0.264  Sum_probs=30.3

Q ss_pred             CEEEEecCCchHHHHHHHHHHHcCCEEEEEeCC
Q 028523           20 EYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGS   52 (208)
Q Consensus        20 ~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s   52 (208)
                      ..+||+||+|-+|...+..+...|.+|+++++.
T Consensus         2 k~~LVTGatGfiG~~lv~~Ll~~g~~V~~~~r~   34 (339)
T d1n7ha_           2 KIALITGITGQDGSYLTEFLLGKGYEVHGLIRR   34 (339)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECC
T ss_pred             CEEEEeCCccHHHHHHHHHHHHCcCEEEEEECC
Confidence            478999999999999999998899999999974

>d2frna1 c.66.1.47 (A:19-278) Hypothetical protein PH0793 {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Met-10+ protein-like
domain: Hypothetical protein PH0793
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=96.56  E-value=0.0038  Score=44.16  Aligned_cols=96  Identities=17%  Similarity=0.124  Sum_probs=63.8

Q ss_pred             CCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHh---cCCCe---eEecCCCccHHHHHHhHCCC-
Q 028523           15 SPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNK---FGFDE---AFNYKEEPDLDAALKRYFPE-   87 (208)
Q Consensus        15 ~~~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~---~g~~~---v~~~~~~~~~~~~~~~~~~~-   87 (208)
                      .+++|++||-.++  |+|..++.+|+.-+++|++++.+++..+.+++.   .|...   ++..    +.    ++.... 
T Consensus       104 ~~~~g~~VlD~~a--G~G~~~l~~a~~~~~~V~avd~n~~a~~~~~~N~~~n~l~~~v~~~~~----D~----~~~~~~~  173 (260)
T d2frna1         104 VAKPDELVVDMFA--GIGHLSLPIAVYGKAKVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNM----DN----RDFPGEN  173 (260)
T ss_dssp             HCCTTCEEEETTC--TTTTTHHHHHHHTCCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECS----CT----TTCCCCS
T ss_pred             hcCCccEEEECcc--eEcHHHHHHHHhCCcEEEEecCCHHHHHHHHHHHHHhCCCceEEEEEc----ch----HHhccCC
Confidence            4689999998874  567777778876446999999999988877642   24322   3322    21    112223 


Q ss_pred             CccEEE-eCCC--chhHHHHHHhhccCCEEEEEecc
Q 028523           88 GINIYF-ENVG--GKMLDAVLLNMRIQGRITLCGMI  120 (208)
Q Consensus        88 ~~d~v~-d~~g--~~~~~~~~~~l~~~G~~v~~g~~  120 (208)
                      .+|.|+ +...  ...+..++..+++||.+..+...
T Consensus       174 ~~D~Ii~~~p~~~~~~l~~a~~~l~~gG~lh~~~~~  209 (260)
T d2frna1         174 IADRILMGYVVRTHEFIPKALSIAKDGAIIHYHNTV  209 (260)
T ss_dssp             CEEEEEECCCSSGGGGHHHHHHHEEEEEEEEEEEEE
T ss_pred             CCCEEEECCCCchHHHHHHHHhhcCCCCEEEEEecc
Confidence            689665 3332  35788899999999988666543

>d1ws6a1 c.66.1.46 (A:15-185) Methyltransferase TTHA0928 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: YhhF-like
domain: Methyltransferase TTHA0928
species: Thermus thermophilus [TaxId: 274]

Probab=96.52  E-value=0.027  Score=36.87  Aligned_cols=96  Identities=20%  Similarity=0.181  Sum_probs=54.1

Q ss_pred             CCCCCCEEEEe-cCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH---hcCCC-eeEecCCCccHHHHHHhHCCCCc
Q 028523           15 SPKQGEYVFVS-AASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKN---KFGFD-EAFNYKEEPDLDAALKRYFPEGI   89 (208)
Q Consensus        15 ~~~~g~~vli~-ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~---~~g~~-~v~~~~~~~~~~~~~~~~~~~~~   89 (208)
                      .+.+|.+||=. .|+|.+|+   . |...|++++.++.+++..+.+++   .+|.. .+... +. +............|
T Consensus        38 ~~~~g~~vLDl~~G~G~~~i---~-a~~~ga~vv~vD~~~~a~~~~~~N~~~~~~~~~v~~~-~~-d~~~~~~~~~~~~f  111 (171)
T d1ws6a1          38 RYPRRGRFLDPFAGSGAVGL---E-AASEGWEAVLVEKDPEAVRLLKENVRRTGLGARVVAL-PV-EVFLPEAKAQGERF  111 (171)
T ss_dssp             HCTTCCEEEEETCSSCHHHH---H-HHHTTCEEEEECCCHHHHHHHHHHHHHHTCCCEEECS-CH-HHHHHHHHHTTCCE
T ss_pred             cccCCCeEEEeccccchhhh---h-hhhccchhhhcccCHHHHhhhhHHHHhhccccceeee-eh-hcccccccccCCcc
Confidence            56788888844 45555554   3 33458999999999888776653   45553 34322 22 21111222333479


Q ss_pred             cEEEeCC----C-chhHHHHH--HhhccCCEEEE
Q 028523           90 NIYFENV----G-GKMLDAVL--LNMRIQGRITL  116 (208)
Q Consensus        90 d~v~d~~----g-~~~~~~~~--~~l~~~G~~v~  116 (208)
                      |+||---    + ...+...+  ..++++|.++.
T Consensus       112 D~If~DPPY~~~~~~~l~~l~~~~ll~~~g~ivi  145 (171)
T d1ws6a1         112 TVAFMAPPYAMDLAALFGELLASGLVEAGGLYVL  145 (171)
T ss_dssp             EEEEECCCTTSCTTHHHHHHHHHTCEEEEEEEEE
T ss_pred             ceeEEccccccCHHHHHHHHHHcCCcCCCeEEEE
Confidence            9997421    2 22333333  35788887765

>d1dusa_ c.66.1.4 (A:) Hypothetical protein MJ0882 {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Hypothetical protein MJ0882
domain: Hypothetical protein MJ0882
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=96.48  E-value=0.0014  Score=44.26  Aligned_cols=103  Identities=13%  Similarity=0.070  Sum_probs=64.2

Q ss_pred             HHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH---hcCCCe-eEecCCCccHHHHHHh
Q 028523            8 AGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKN---KFGFDE-AFNYKEEPDLDAALKR   83 (208)
Q Consensus         8 ~~l~~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~---~~g~~~-v~~~~~~~~~~~~~~~   83 (208)
                      ..|.+.....++++||=.|+  |.|..++.+++ .+.+|++++.++...+.+++   ..+... -+..... ++.   ..
T Consensus        42 ~lLi~~l~~~~~~~VLDiGc--G~G~~~~~la~-~~~~v~~iD~s~~~i~~a~~n~~~~~l~~~~i~~~~~-d~~---~~  114 (194)
T d1dusa_          42 KILVENVVVDKDDDILDLGC--GYGVIGIALAD-EVKSTTMADINRRAIKLAKENIKLNNLDNYDIRVVHS-DLY---EN  114 (194)
T ss_dssp             HHHHHHCCCCTTCEEEEETC--TTSHHHHHHGG-GSSEEEEEESCHHHHHHHHHHHHHTTCTTSCEEEEEC-STT---TT
T ss_pred             HHHHHhCCcCCCCeEEEEee--cCChhHHHHHh-hccccceeeeccccchhHHHHHHHhCCccceEEEEEc-chh---hh
Confidence            34556677889999998884  55666666665 46799999999988777764   223321 1111111 211   11


Q ss_pred             HCCCCccEEEeCC----Cch----hHHHHHHhhccCCEEEEE
Q 028523           84 YFPEGINIYFENV----GGK----MLDAVLLNMRIQGRITLC  117 (208)
Q Consensus        84 ~~~~~~d~v~d~~----g~~----~~~~~~~~l~~~G~~v~~  117 (208)
                      ..++.+|+|+-..    +.+    .+..+.+.|+|+|.++.+
T Consensus       115 ~~~~~fD~Ii~~~p~~~~~~~~~~~l~~~~~~LkpgG~l~i~  156 (194)
T d1dusa_         115 VKDRKYNKIITNPPIRAGKEVLHRIIEEGKELLKDNGEIWVV  156 (194)
T ss_dssp             CTTSCEEEEEECCCSTTCHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred             hccCCceEEEEcccEEecchhhhhHHHHHHHhcCcCcEEEEE
Confidence            2233799998632    222    367788899999997654

>d1dxya1 c.2.1.4 (A:101-299) D-2-hydroxyisocaproate dehydrogenase {Lactobacillus casei [TaxId: 1582]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-2-hydroxyisocaproate dehydrogenase
species: Lactobacillus casei [TaxId: 1582]

Probab=96.48  E-value=0.0046  Score=41.82  Aligned_cols=85  Identities=19%  Similarity=0.144  Sum_probs=60.3

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHHHHhHCCCCccEEEeCCC
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVG   97 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~d~v~d~~g   97 (208)
                      .|.+|.|+| .|.+|...+++++.+|.+|++.++...+.        ....+.+.   ++.+.++.     .|++.-++.
T Consensus        44 ~~ktvgIiG-~G~IG~~va~~l~~fg~~v~~~d~~~~~~--------~~~~~~~~---~l~~l~~~-----~D~v~~~~p  106 (199)
T d1dxya1          44 GQQTVGVMG-TGHIGQVAIKLFKGFGAKVIAYDPYPMKG--------DHPDFDYV---SLEDLFKQ-----SDVIDLHVP  106 (199)
T ss_dssp             GGSEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSCCSS--------CCTTCEEC---CHHHHHHH-----CSEEEECCC
T ss_pred             cceeeeeee-cccccccccccccccceeeeccCCccchh--------hhcchhHH---HHHHHHHh-----cccceeeec
Confidence            468999999 59999999999999999999998654321        11111121   44444443     688887765


Q ss_pred             -ch-----hHHHHHHhhccCCEEEEEec
Q 028523           98 -GK-----MLDAVLLNMRIQGRITLCGM  119 (208)
Q Consensus        98 -~~-----~~~~~~~~l~~~G~~v~~g~  119 (208)
                       .+     .-...+..|+++..++.++.
T Consensus       107 lt~~T~~li~~~~l~~mk~~a~lIN~aR  134 (199)
T d1dxya1         107 GIEQNTHIINEAAFNLMKPGAIVINTAR  134 (199)
T ss_dssp             CCGGGTTSBCHHHHHHSCTTEEEEECSC
T ss_pred             ccccccccccHHHhhccCCceEEEeccc
Confidence             33     24678889999999988776

>d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Escherichia coli [TaxId: 562]

Probab=96.45  E-value=0.0036  Score=46.25  Aligned_cols=34  Identities=18%  Similarity=0.296  Sum_probs=29.4

Q ss_pred             CEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCH
Q 028523           20 EYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSK   53 (208)
Q Consensus        20 ~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~   53 (208)
                      +.|||+||+|-+|..++..+...|.+|+++++..
T Consensus         2 K~vLITGatGfiGs~lv~~Ll~~g~~V~~~~r~~   35 (357)
T d1db3a_           2 KVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRA   35 (357)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEECC--
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCcCEEEEEECCC
Confidence            5789999999999999998888899999999754

>d1nvta1 c.2.1.7 (A:111-287) Shikimate 5-dehydrogenase AroE {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=96.44  E-value=0.0049  Score=40.79  Aligned_cols=54  Identities=11%  Similarity=0.115  Sum_probs=40.3

Q ss_pred             HHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhc
Q 028523            8 AGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKF   63 (208)
Q Consensus         8 ~~l~~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~   63 (208)
                      .+|.+...--+|++|+|.|+ |+++.+++..+...| +|++..|+.++.+.+.+.+
T Consensus         7 ~~l~~~~~~~~~k~vlIlGa-GG~arai~~aL~~~~-~i~I~nR~~~ka~~l~~~~   60 (177)
T d1nvta1           7 MALEEEIGRVKDKNIVIYGA-GGAARAVAFELAKDN-NIIIANRTVEKAEALAKEI   60 (177)
T ss_dssp             HHHHHHHCCCCSCEEEEECC-SHHHHHHHHHHTSSS-EEEEECSSHHHHHHHHHHH
T ss_pred             HHHHHhCCCcCCCEEEEECC-cHHHHHHHHHHcccc-ceeeehhhhhHHHHHHHHH
Confidence            45545444467889999995 999998877665555 9999999999877665344

>d2pv7a2 c.2.1.6 (A:92-243) Prephenate dehydrogenase TyrA {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Haemophilus influenzae [TaxId: 727]

Probab=96.44  E-value=0.034  Score=35.44  Aligned_cols=94  Identities=12%  Similarity=0.005  Sum_probs=60.7

Q ss_pred             CEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHHHHhHCCC--CccEEEeCCC
Q 028523           20 EYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPE--GINIYFENVG   97 (208)
Q Consensus        20 ~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~--~~d~v~d~~g   97 (208)
                      .+|.|.||.|.+|...+..++..|++|.+.++++....... .-+++.++...........+.+..+.  .=.+++|+.+
T Consensus        10 ~kI~iIGg~G~mG~~la~~L~~~G~~V~~~d~~~~~~~~~~-~~~~~~v~~~~~~~~~~~v~~~~~~~~~~~~iiiD~~S   88 (152)
T d2pv7a2          10 HKIVIVGGYGKLGGLFARYLRASGYPISILDREDWAVAESI-LANADVVIVSVPINLTLETIERLKPYLTENMLLADLTS   88 (152)
T ss_dssp             CCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTCGGGHHHH-HTTCSEEEECSCGGGHHHHHHHHGGGCCTTSEEEECCS
T ss_pred             CeEEEEcCCCHHHHHHHHHHHHcCCCcEecccccccccchh-hhhccccccccchhhheeeeecccccccCCceEEEecc
Confidence            57999998899999999999999999999998877655544 44666655444432444444444332  1247888877


Q ss_pred             c--hhHHHHHHhhccCCEEEE
Q 028523           98 G--KMLDAVLLNMRIQGRITL  116 (208)
Q Consensus        98 ~--~~~~~~~~~l~~~G~~v~  116 (208)
                      .  +..+...+.+  .++++.
T Consensus        89 vk~~~~~~~~~~~--~~~~v~  107 (152)
T d2pv7a2          89 VKREPLAKMLEVH--TGAVLG  107 (152)
T ss_dssp             CCHHHHHHHHHHC--SSEEEE
T ss_pred             cCHHHHHHHHHHc--cCCEEE
Confidence            3  3344444433  345543

>d1g8sa_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Fibrillarin homologue
domain: Fibrillarin homologue
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=96.43  E-value=0.0058  Score=42.34  Aligned_cols=100  Identities=10%  Similarity=0.061  Sum_probs=62.3

Q ss_pred             cCCCCCCEEEEecCCchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHhcCC---CeeEecCCCccHHHHHHhHCCCCc
Q 028523           14 CSPKQGEYVFVSAASGAVGQLVGQFAKLV-GCYVVGSAGSKDKVDLLKNKFGF---DEAFNYKEEPDLDAALKRYFPEGI   89 (208)
Q Consensus        14 ~~~~~g~~vli~ga~g~vG~~a~qla~~~-g~~v~~~~~s~~~~~~~~~~~g~---~~v~~~~~~~~~~~~~~~~~~~~~   89 (208)
                      ..+++|++||=.|+  |.|..+..+++.. +.+|++++.|++-.+.+++....   ...+..... ... ..... ...+
T Consensus        70 l~ikpG~~VLDlGc--GsG~~~~~la~~~~~g~V~aVDiS~~~i~~a~~~a~~~~ni~~i~~d~~-~~~-~~~~~-~~~v  144 (230)
T d1g8sa_          70 MPIKRDSKILYLGA--SAGTTPSHVADIADKGIVYAIEYAPRIMRELLDACAERENIIPILGDAN-KPQ-EYANI-VEKV  144 (230)
T ss_dssp             CCCCTTCEEEEESC--CSSHHHHHHHHHTTTSEEEEEESCHHHHHHHHHHTTTCTTEEEEECCTT-CGG-GGTTT-CCCE
T ss_pred             CCCCCCCEEEEeCE--EcCHHHHHHHHhCCCCEEEEEeCcHHHHHHHHHHHhhhcccceEEEeec-cCc-ccccc-ccee
Confidence            46899999999996  4477778888865 34999999999988877732211   112211111 111 11111 1146


Q ss_pred             cEEEeCCCc-h----hHHHHHHhhccCCEEEEEe
Q 028523           90 NIYFENVGG-K----MLDAVLLNMRIQGRITLCG  118 (208)
Q Consensus        90 d~v~d~~g~-~----~~~~~~~~l~~~G~~v~~g  118 (208)
                      |+++..... +    .+..+.+.|+|||.++..-
T Consensus       145 ~~i~~~~~~~~~~~~~l~~~~r~LKpgG~~~i~~  178 (230)
T d1g8sa_         145 DVIYEDVAQPNQAEILIKNAKWFLKKGGYGMIAI  178 (230)
T ss_dssp             EEEEECCCSTTHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred             EEeeccccchHHHHHHHHHHHHhcccCceEEEEe
Confidence            666665541 1    4778888999999987653

>d2czca2 c.2.1.3 (A:1-139,A:302-334) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=96.37  E-value=0.032  Score=36.58  Aligned_cols=96  Identities=16%  Similarity=0.081  Sum_probs=60.7

Q ss_pred             EEEEecCCchHHHHHHHHHHHcC-CEEEEEeC-C-HHHHHHHHHhcCCCeeEecCCCccHHHHHHhHC----------CC
Q 028523           21 YVFVSAASGAVGQLVGQFAKLVG-CYVVGSAG-S-KDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYF----------PE   87 (208)
Q Consensus        21 ~vli~ga~g~vG~~a~qla~~~g-~~v~~~~~-s-~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~----------~~   87 (208)
                      +|.|.| .|-+|...++.+.... .+++.+.. + ......+. .++.+.... ... ... ......          ..
T Consensus         4 rIaING-fGRIGR~v~Ral~~~~dieiVaINd~~~~~~~~~l~-~~~~~~~~~-~~~-~~~-~~~~~~~~~~~~~~~~~~   78 (172)
T d2czca2           4 KVGVNG-YGTIGKRVAYAVTKQDDMELIGITKTKPDFEAYRAK-ELGIPVYAA-SEE-FIP-RFEKEGFEVAGTLNDLLE   78 (172)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHTCTTEEEEEEEESSCSHHHHHHH-HTTCCEEES-SGG-GHH-HHHHHTCCCSCBHHHHHT
T ss_pred             EEEEEC-CCHHHHHHHHHHHhCCCceEEEEecCCChHHHHHhh-hcCceeecc-ccc-cee-eecccCccccchhhhhhc
Confidence            688999 6999999888776543 57776653 2 23444555 666543221 111 111 111110          01


Q ss_pred             CccEEEeCCC-chhHHHHHHhhccCCEEEEEeccc
Q 028523           88 GINIYFENVG-GKMLDAVLLNMRIQGRITLCGMIS  121 (208)
Q Consensus        88 ~~d~v~d~~g-~~~~~~~~~~l~~~G~~v~~g~~~  121 (208)
                      ++|+|+||+| ....+.+-..+..|-+.|..+.+.
T Consensus        79 ~vDvViEcTG~f~~~~~~~~hl~~G~k~Vi~s~~~  113 (172)
T d2czca2          79 KVDIIVDATPGGIGAKNKPLYEKAGVKAIFQGGEK  113 (172)
T ss_dssp             TCSEEEECCSTTHHHHHHHHHHHHTCEEEECTTSC
T ss_pred             cCCEEEECCCCCCCHHHHHHHHHcCCCEEEECCCC
Confidence            6999999999 567778888899998988877654

>d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-glucuronate decarboxylase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.31  E-value=0.0013  Score=47.86  Aligned_cols=32  Identities=16%  Similarity=0.223  Sum_probs=29.0

Q ss_pred             CEEEEecCCchHHHHHHHHHHHcCCEEEEEeC
Q 028523           20 EYVFVSAASGAVGQLVGQFAKLVGCYVVGSAG   51 (208)
Q Consensus        20 ~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~   51 (208)
                      ++|||+||+|-+|...+..+...|.+|+++++
T Consensus         2 KKIlVtG~sGfiG~~lv~~L~~~g~~V~~~d~   33 (312)
T d2b69a1           2 KRILITGGAGFVGSHLTDKLMMDGHEVTVVDN   33 (312)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEEC
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCcCEEEEEeC
Confidence            57999999999999999888888999999874

>d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein PA4017
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=96.30  E-value=0.0059  Score=41.44  Aligned_cols=68  Identities=15%  Similarity=0.089  Sum_probs=43.6

Q ss_pred             CEEEEecCCchHHHHHHHHHHHcCC--EEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHHHHhHCCCCccEEEeCCC
Q 028523           20 EYVFVSAASGAVGQLVGQFAKLVGC--YVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVG   97 (208)
Q Consensus        20 ~~vli~ga~g~vG~~a~qla~~~g~--~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~d~v~d~~g   97 (208)
                      ++|||+||+|-+|...++.+...|.  +|++..+++..         ...-+..... ++.+. .+.....+|.|+.|+|
T Consensus         3 KkIlItGatG~iG~~lv~~L~~~~~~~~v~~~~r~~~~---------~~~~~~~~~~-d~~~~-~~~~~~~~d~vi~~~g   71 (212)
T d2a35a1           3 KRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALA---------EHPRLDNPVG-PLAEL-LPQLDGSIDTAFCCLG   71 (212)
T ss_dssp             CEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCC---------CCTTEECCBS-CHHHH-GGGCCSCCSEEEECCC
T ss_pred             CEEEEECCCcHHHHHHHHHHHhCCCeEEEEEEeCCchh---------hccccccccc-chhhh-hhccccchheeeeeee
Confidence            6899999999999999998887876  67766654311         1111222222 44433 3333346899999987


Q ss_pred             c
Q 028523           98 G   98 (208)
Q Consensus        98 ~   98 (208)
                      .
T Consensus        72 ~   72 (212)
T d2a35a1          72 T   72 (212)
T ss_dssp             C
T ss_pred             e
Confidence            3

>d2cl5a1 c.66.1.1 (A:3-216) Catechol O-methyltransferase, COMT {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: COMT-like
domain: Catechol O-methyltransferase, COMT
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=96.28  E-value=0.0029  Score=43.39  Aligned_cols=100  Identities=10%  Similarity=0.098  Sum_probs=63.6

Q ss_pred             cCCCCCCEEEEecCCchHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHH---hcCCCeeEecCCCccHHHHHHhH---C
Q 028523           14 CSPKQGEYVFVSAASGAVGQLVGQFAKLV--GCYVVGSAGSKDKVDLLKN---KFGFDEAFNYKEEPDLDAALKRY---F   85 (208)
Q Consensus        14 ~~~~~g~~vli~ga~g~vG~~a~qla~~~--g~~v~~~~~s~~~~~~~~~---~~g~~~v~~~~~~~~~~~~~~~~---~   85 (208)
                      .+..+..+||=+|  ++.|..++.+|+.+  +.+|+.++.+++..+.+++   ..|...-+..... +..+.+.++   .
T Consensus        52 v~~~kpk~ILEiG--t~~G~Sti~la~al~~~g~v~sid~~~~~~~~a~~~~~~~gl~~~i~l~~G-d~~e~l~~l~~~~  128 (214)
T d2cl5a1          52 IREYSPSLVLELG--AYCGYSAVRMARLLQPGARLLTMEMNPDYAAITQQMLNFAGLQDKVTILNG-ASQDLIPQLKKKY  128 (214)
T ss_dssp             HHHHCCSEEEEEC--CTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEES-CHHHHGGGHHHHS
T ss_pred             HHhhCCCEEEEEc--cCchhHHHHHHHhCCCccEEEEEeccHHHHHHHHHHHHHcCCCccceeeec-cccccccchhhcc
Confidence            3344567899998  56688888888876  5699999999887766653   4465432333333 445544433   2


Q ss_pred             C-CCccEEEeCCCch------hHHHHHHhhccCCEEEE
Q 028523           86 P-EGINIYFENVGGK------MLDAVLLNMRIQGRITL  116 (208)
Q Consensus        86 ~-~~~d~v~d~~g~~------~~~~~~~~l~~~G~~v~  116 (208)
                      . +.+|++|--...+      .+...++.|+|||.++.
T Consensus       129 ~~~~~D~ifiD~~~~~~~~~~~l~~~~~lLkpGGvIv~  166 (214)
T d2cl5a1         129 DVDTLDMVFLDHWKDRYLPDTLLLEKCGLLRKGTVLLA  166 (214)
T ss_dssp             CCCCEEEEEECSCGGGHHHHHHHHHHTTCEEEEEEEEE
T ss_pred             cccccceeeecccccccccHHHHHHHhCccCCCcEEEE
Confidence            2 2699887544322      24456677999987653

>d1xtpa_ c.66.1.42 (A:) Hypothetical protein Lmaj004091aaa (LmjF30.0810) {Leishmania major [TaxId: 5664]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: AD-003 protein-like
domain: Hypothetical protein Lmaj004091aaa (LmjF30.0810)
species: Leishmania major [TaxId: 5664]

Probab=96.27  E-value=0.016  Score=40.59  Aligned_cols=100  Identities=9%  Similarity=0.033  Sum_probs=66.5

Q ss_pred             CCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHHHHhHCCCCccEEEe
Q 028523           15 SPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFE   94 (208)
Q Consensus        15 ~~~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~d~v~d   94 (208)
                      ...++.+||=.|+  |+|..+.+++.....+|++++.+++-.+.+++.+.....+++... ++.+.  ...++.+|+|+.
T Consensus        90 ~~~~~~~vLD~Gc--G~G~~t~~ll~~~~~~v~~vD~s~~~l~~a~~~~~~~~~~~~~~~-d~~~~--~~~~~~fD~I~~  164 (254)
T d1xtpa_          90 PGHGTSRALDCGA--GIGRITKNLLTKLYATTDLLEPVKHMLEEAKRELAGMPVGKFILA-SMETA--TLPPNTYDLIVI  164 (254)
T ss_dssp             TTCCCSEEEEETC--TTTHHHHHTHHHHCSEEEEEESCHHHHHHHHHHTTTSSEEEEEES-CGGGC--CCCSSCEEEEEE
T ss_pred             CCCCCCeEEEecc--cCChhhHHHHhhcCceEEEEcCCHHHHHhhhccccccccceeEEc-ccccc--ccCCCccceEEe
Confidence            4456778888884  678888888877777999999999988888865543333332222 22110  111236999976


Q ss_pred             CCC-----c----hhHHHHHHhhccCCEEEEEec
Q 028523           95 NVG-----G----KMLDAVLLNMRIQGRITLCGM  119 (208)
Q Consensus        95 ~~g-----~----~~~~~~~~~l~~~G~~v~~g~  119 (208)
                      .-.     .    ..+..+.+.|+++|.++....
T Consensus       165 ~~vl~hl~d~d~~~~l~~~~~~LkpgG~iii~e~  198 (254)
T d1xtpa_         165 QWTAIYLTDADFVKFFKHCQQALTPNGYIFFKEN  198 (254)
T ss_dssp             ESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred             eccccccchhhhHHHHHHHHHhcCCCcEEEEEec
Confidence            432     1    247788899999999887543

>d1wxxa2 c.66.1.51 (A:65-382) Hypothetical protein TTHA1280, middle and C-terminal domains {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Hypothetical protein TTHA1280, middle and C-terminal domains
species: Thermus thermophilus [TaxId: 274]

Probab=96.25  E-value=0.011  Score=43.05  Aligned_cols=100  Identities=14%  Similarity=0.077  Sum_probs=60.5

Q ss_pred             CCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH---hcCCCeeEecCCCccHHHHHHhHC--CCCcc
Q 028523           16 PKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKN---KFGFDEAFNYKEEPDLDAALKRYF--PEGIN   90 (208)
Q Consensus        16 ~~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~---~~g~~~v~~~~~~~~~~~~~~~~~--~~~~d   90 (208)
                      ..+|++||=.++  +.|..++++++ .+.+|+.++.|+...+.+++   ..|.+.+ ..-.. +..+.++...  ++.||
T Consensus       143 ~~~g~rVLDl~~--gtG~~s~~~a~-g~~~V~~vD~s~~al~~a~~n~~~ngl~~~-~~i~~-d~~~~~~~~~~~~~~fD  217 (318)
T d1wxxa2         143 RFRGERALDVFS--YAGGFALHLAL-GFREVVAVDSSAEALRRAEENARLNGLGNV-RVLEA-NAFDLLRRLEKEGERFD  217 (318)
T ss_dssp             GCCEEEEEEETC--TTTHHHHHHHH-HEEEEEEEESCHHHHHHHHHHHHHTTCTTE-EEEES-CHHHHHHHHHHTTCCEE
T ss_pred             HhCCCeeeccCC--CCcHHHHHHHh-cCCcEEeecchHHHHHHHHHHHHHcCCCCc-ceeec-cHHHHhhhhHhhhcCCC
Confidence            346888885542  33444556664 34599999999998887764   2344322 11112 4444444332  23799


Q ss_pred             EEEeCC---C-c------------hhHHHHHHhhccCCEEEEEecc
Q 028523           91 IYFENV---G-G------------KMLDAVLLNMRIQGRITLCGMI  120 (208)
Q Consensus        91 ~v~d~~---g-~------------~~~~~~~~~l~~~G~~v~~g~~  120 (208)
                      +|+--.   + +            +.+..++++|+|||.++.+...
T Consensus       218 ~Vi~DpP~~~~~~~~~~~~~~~~~~l~~~a~~lLkpGG~Lv~~scs  263 (318)
T d1wxxa2         218 LVVLDPPAFAKGKKDVERAYRAYKEVNLRAIKLLKEGGILATASCS  263 (318)
T ss_dssp             EEEECCCCSCCSTTSHHHHHHHHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred             EEEEcCCccccchHHHHHHHHHHHHHHHHHHHHcCCCCEEEEEeCC
Confidence            887422   1 1            1345778899999999887664

>d1kjqa2 c.30.1.1 (A:2-112) Glycinamide ribonucleotide transformylase PurT, N-domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Glycinamide ribonucleotide transformylase PurT, N-domain
species: Escherichia coli [TaxId: 562]

Probab=96.24  E-value=0.0046  Score=37.63  Aligned_cols=39  Identities=18%  Similarity=0.250  Sum_probs=32.7

Q ss_pred             CCCC-CEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHH
Q 028523           16 PKQG-EYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDK   55 (208)
Q Consensus        16 ~~~g-~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~   55 (208)
                      +.++ .+|.|.|| |.+|.+.++-|+.+|.++++.+.+++.
T Consensus         7 ~~~~~~kigIlGg-GQL~rMla~aA~~lG~~v~v~d~~~~~   46 (111)
T d1kjqa2           7 LRPAATRVMLLGS-GELGKEVAIECQRLGVEVIAVDRYADA   46 (111)
T ss_dssp             TSTTCCEEEEESC-SHHHHHHHHHHHTTTCEEEEEESSTTC
T ss_pred             CCCCCCEEEEEeC-CHHHHHHHHHHHHCCCEEEEEcCCCCC
Confidence            3444 56999996 999999999999999999999977653

>d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=96.22  E-value=0.013  Score=42.82  Aligned_cols=32  Identities=19%  Similarity=0.136  Sum_probs=28.4

Q ss_pred             CEEEEecCCchHHHHHHHHHHHcCCEEEEEeC
Q 028523           20 EYVFVSAASGAVGQLVGQFAKLVGCYVVGSAG   51 (208)
Q Consensus        20 ~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~   51 (208)
                      +.|||+||+|-+|...+..+...|.+|+++++
T Consensus         2 K~ILVTGatGfIG~~lv~~Ll~~g~~V~~~d~   33 (347)
T d1z45a2           2 KIVLVTGGAGYIGSHTVVELIENGYDCVVADN   33 (347)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEEC
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCcCeEEEEEC
Confidence            47899999999999999888888999999863

>d1leha1 c.2.1.7 (A:135-364) Leucine dehydrogenase {Bacillus sphaericus [TaxId: 1421]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Leucine dehydrogenase
species: Bacillus sphaericus [TaxId: 1421]

Probab=96.20  E-value=0.035  Score=38.19  Aligned_cols=81  Identities=17%  Similarity=0.145  Sum_probs=57.4

Q ss_pred             CCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHHHHhHCCCCccEEEeCC
Q 028523           17 KQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENV   96 (208)
Q Consensus        17 ~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~d~v~d~~   96 (208)
                      -.|.+|.|.| .|.||..+++++...|+++++++.+..+.+.+....|...+ +..   +       +..-.+|+.+=|.
T Consensus        37 l~g~~v~IqG-~GnVG~~~a~~L~~~Gakvv~~d~~~~~~~~~~~~~g~~~~-~~~---~-------~~~~~cDIl~PcA  104 (230)
T d1leha1          37 LEGLAVSVQG-LGNVAKALCKKLNTEGAKLVVTDVNKAAVSAAVAEEGADAV-APN---A-------IYGVTCDIFAPCA  104 (230)
T ss_dssp             CTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHCCEEC-CGG---G-------TTTCCCSEEEECS
T ss_pred             CCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEeecccHHHHHHHHHhcCCccc-CCc---c-------cccccccEecccc
Confidence            4688999999 69999999999999999999999998888877756776322 211   1       1122588888876


Q ss_pred             Cc-hhHHHHHHhhc
Q 028523           97 GG-KMLDAVLLNMR  109 (208)
Q Consensus        97 g~-~~~~~~~~~l~  109 (208)
                      -+ ..-....+.++
T Consensus       105 ~~~~I~~~~~~~l~  118 (230)
T d1leha1         105 LGAVLNDFTIPQLK  118 (230)
T ss_dssp             CSCCBSTTHHHHCC
T ss_pred             cccccChHHhhccC
Confidence            64 33333444443

>d1p3da1 c.5.1.1 (A:11-106) UDP-N-acetylmuramate-alanine ligase MurC {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramate-alanine ligase MurC
species: Haemophilus influenzae [TaxId: 727]

Probab=96.20  E-value=0.019  Score=33.77  Aligned_cols=71  Identities=14%  Similarity=0.154  Sum_probs=48.9

Q ss_pred             CCCCCCEEEEecCCchHHHHH-HHHHHHcCCEEEEEeCCHH-HHHHHHHhcCCCeeEecCCCccHHHHHHhHCCCCccEE
Q 028523           15 SPKQGEYVFVSAASGAVGQLV-GQFAKLVGCYVVGSAGSKD-KVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIY   92 (208)
Q Consensus        15 ~~~~g~~vli~ga~g~vG~~a-~qla~~~g~~v~~~~~s~~-~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~d~v   92 (208)
                      .++..+++.+.|- |++|..+ +++++..|++|...+.... ..+.+. +.|... ...+.....         .+.|+|
T Consensus         4 ~~~~~~~ihfiGi-gG~GMs~LA~~L~~~G~~VsGSD~~~~~~~~~L~-~~Gi~v-~~g~~~~~i---------~~~d~v   71 (96)
T d1p3da1           4 EMRRVQQIHFIGI-GGAGMSGIAEILLNEGYQISGSDIADGVVTQRLA-QAGAKI-YIGHAEEHI---------EGASVV   71 (96)
T ss_dssp             CCTTCCEEEEETT-TSTTHHHHHHHHHHHTCEEEEEESCCSHHHHHHH-HTTCEE-EESCCGGGG---------TTCSEE
T ss_pred             cchhCCEEEEEEE-CHHHHHHHHHHHHhCCCEEEEEeCCCChhhhHHH-HCCCeE-EECCccccC---------CCCCEE
Confidence            4567789999995 8889776 7999999999999997633 445666 678743 332222011         147888


Q ss_pred             EeCCC
Q 028523           93 FENVG   97 (208)
Q Consensus        93 ~d~~g   97 (208)
                      +-+.+
T Consensus        72 V~S~A   76 (96)
T d1p3da1          72 VVSSA   76 (96)
T ss_dssp             EECTT
T ss_pred             EECCC
Confidence            87665

>d1im8a_ c.66.1.14 (A:) Hypothetical protein HI0319 (YecO) {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Hypothetical protein HI0319 (YecO)
domain: Hypothetical protein HI0319 (YecO)
species: Haemophilus influenzae [TaxId: 727]

Probab=96.18  E-value=0.012  Score=40.40  Aligned_cols=96  Identities=10%  Similarity=0.101  Sum_probs=62.4

Q ss_pred             CCCCCEEEEecCCchHHHHHHHHHHH---cCCEEEEEeCCHHHHHHHHHhc---CCCeeEecCCCccHHHHHHhHCCCCc
Q 028523           16 PKQGEYVFVSAASGAVGQLVGQFAKL---VGCYVVGSAGSKDKVDLLKNKF---GFDEAFNYKEEPDLDAALKRYFPEGI   89 (208)
Q Consensus        16 ~~~g~~vli~ga~g~vG~~a~qla~~---~g~~v~~~~~s~~~~~~~~~~~---g~~~v~~~~~~~~~~~~~~~~~~~~~   89 (208)
                      ++++.+||=.|.  |.|..+..+++.   .+++|++++.|++-.+.+++.+   +....+..... +.    .+.....+
T Consensus        37 ~~~~~~vLDlGC--GtG~~~~~l~~~~~~~~~~v~giD~S~~ml~~A~~~~~~~~~~~~~~~~~~-d~----~~~~~~~~  109 (225)
T d1im8a_          37 VTADSNVYDLGC--SRGAATLSARRNINQPNVKIIGIDNSQPMVERCRQHIAAYHSEIPVEILCN-DI----RHVEIKNA  109 (225)
T ss_dssp             CCTTCEEEEESC--TTCHHHHHHHHTCCCSSCEEEEECSCHHHHHHHHHHHHTSCCSSCEEEECS-CT----TTCCCCSE
T ss_pred             cCCCCEEEEecc--chhhHHHHHHHhhcCCCCceEEeCCCHHHHHHHHHHhHhhcccchhhhccc-hh----hccccccc
Confidence            688999999984  567777777775   4779999999999888877432   33222211111 11    11112256


Q ss_pred             cEEEeCCC---------chhHHHHHHhhccCCEEEEEe
Q 028523           90 NIYFENVG---------GKMLDAVLLNMRIQGRITLCG  118 (208)
Q Consensus        90 d~v~d~~g---------~~~~~~~~~~l~~~G~~v~~g  118 (208)
                      |+++-...         ...+..+.+.|+|||.++...
T Consensus       110 d~i~~~~~l~~~~~~d~~~~l~~i~~~LkpgG~li~~~  147 (225)
T d1im8a_         110 SMVILNFTLQFLPPEDRIALLTKIYEGLNPNGVLVLSE  147 (225)
T ss_dssp             EEEEEESCGGGSCGGGHHHHHHHHHHHEEEEEEEEEEE
T ss_pred             eeeEEeeeccccChhhHHHHHHHHHHhCCCCceeeccc
Confidence            76655322         125889999999999998764

>d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Pinoresinol-lariciresinol reductase
species: Giant arborvitae (Thuja plicata) [TaxId: 3316]

Probab=96.17  E-value=0.025  Score=40.15  Aligned_cols=34  Identities=12%  Similarity=0.127  Sum_probs=30.5

Q ss_pred             CEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCH
Q 028523           20 EYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSK   53 (208)
Q Consensus        20 ~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~   53 (208)
                      .+|||+||+|-+|...+..+...|.+|++++|++
T Consensus         4 ~KILVtGatG~iG~~l~~~L~~~G~~V~~~~R~~   37 (312)
T d1qyda_           4 SRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPE   37 (312)
T ss_dssp             CCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSC
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCC
Confidence            4599999999999999998888999999999764

>d2i6ga1 c.66.1.44 (A:1-198) Putative methyltransferase TehB {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: TehB-like
domain: Putative methyltransferase TehB
species: Salmonella typhimurium [TaxId: 90371]

Probab=96.15  E-value=0.026  Score=37.71  Aligned_cols=98  Identities=11%  Similarity=0.065  Sum_probs=61.3

Q ss_pred             cCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH---hcCCCee-EecCCCccHHHHHHhHCCCCc
Q 028523           14 CSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKN---KFGFDEA-FNYKEEPDLDAALKRYFPEGI   89 (208)
Q Consensus        14 ~~~~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~---~~g~~~v-~~~~~~~~~~~~~~~~~~~~~   89 (208)
                      +...++.+||=+|+  |.|..+.-+++ .|++|++++.|+...+.+++   +.|.+.+ +...+..++      ..++.|
T Consensus        26 ~~~~~~grvLDiGc--G~G~~~~~la~-~g~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~d~~~~------~~~~~f   96 (198)
T d2i6ga1          26 AKVVAPGRTLDLGC--GNGRNSLYLAA-NGYDVTAWDKNPASMANLERIKAAEGLDNLQTDLVDLNTL------TFDGEY   96 (198)
T ss_dssp             HTTSCSCEEEEETC--TTSHHHHHHHH-TTCEEEEEESCHHHHHHHHHHHHHTTCTTEEEEECCTTTC------CCCCCE
T ss_pred             cccCCCCcEEEECC--CCCHHHHHHHH-HhhhhccccCcHHHHHHHHHHhhhccccchhhhheecccc------cccccc
Confidence            44444458998884  47887777775 58999999999987776652   3344321 111111000      012369


Q ss_pred             cEEEeCC-----C-c---hhHHHHHHhhccCCEEEEEecc
Q 028523           90 NIYFENV-----G-G---KMLDAVLLNMRIQGRITLCGMI  120 (208)
Q Consensus        90 d~v~d~~-----g-~---~~~~~~~~~l~~~G~~v~~g~~  120 (208)
                      |+|+...     . .   ..+..+.++|+++|.++.....
T Consensus        97 D~I~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~~  136 (198)
T d2i6ga1          97 DFILSTVVMMFLEAQTIPGLIANMQRCTKPGGYNLIVAAM  136 (198)
T ss_dssp             EEEEEESCGGGSCTTHHHHHHHHHHHTEEEEEEEEEEEEB
T ss_pred             cEEEEeeeeecCCHHHHHHHHHHHHHHcCCCcEEEEEEec
Confidence            9998632     1 1   2577888899999998876543

>d1xeaa1 c.2.1.3 (A:2-122,A:267-312) Putative oxidoreductase VCA1048 {Vibrio cholerae [TaxId: 666]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Putative oxidoreductase VCA1048
species: Vibrio cholerae [TaxId: 666]

Probab=96.14  E-value=0.031  Score=36.27  Aligned_cols=88  Identities=9%  Similarity=0.064  Sum_probs=59.0

Q ss_pred             EEEEecCCchHHHH-HHHHHHHc-CCEEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHHHHhHCCCCccEEEeCCCc
Q 028523           21 YVFVSAASGAVGQL-VGQFAKLV-GCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVGG   98 (208)
Q Consensus        21 ~vli~ga~g~vG~~-a~qla~~~-g~~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~d~v~d~~g~   98 (208)
                      +|.|.|+ |.+|.. .....+.. +.+++++++++++.+.+.++++...+++     ++.+.+.    ..+|.|+-|+..
T Consensus         3 rvgiiG~-G~~~~~~~~~~l~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~-----~~~~ll~----~~iD~V~I~tp~   72 (167)
T d1xeaa1           3 KIAMIGL-GDIAQKAYLPVLAQWPDIELVLCTRNPKVLGTLATRYRVSATCT-----DYRDVLQ----YGVDAVMIHAAT   72 (167)
T ss_dssp             EEEEECC-CHHHHHTHHHHHTTSTTEEEEEECSCHHHHHHHHHHTTCCCCCS-----STTGGGG----GCCSEEEECSCG
T ss_pred             EEEEEcC-CHHHHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHhcccccccc-----cHHHhcc----cccceecccccc
Confidence            5788894 888864 55666555 5588888888888877776888765432     2222221    258999999985


Q ss_pred             -hhHHHHHHhhccCCEEEEEec
Q 028523           99 -KMLDAVLLNMRIQGRITLCGM  119 (208)
Q Consensus        99 -~~~~~~~~~l~~~G~~v~~g~  119 (208)
                       ...+.+..++..|-. +.+.-
T Consensus        73 ~~H~~~~~~al~~gk~-V~~EK   93 (167)
T d1xeaa1          73 DVHSTLAAFFLHLGIP-TFVDK   93 (167)
T ss_dssp             GGHHHHHHHHHHTTCC-EEEES
T ss_pred             cccccccccccccccc-cccCC
Confidence             567777778887654 45543

>d1ks9a2 c.2.1.6 (A:1-167) Ketopantoate reductase PanE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Ketopantoate reductase PanE
species: Escherichia coli [TaxId: 562]

Probab=96.11  E-value=0.0019  Score=42.12  Aligned_cols=86  Identities=15%  Similarity=0.073  Sum_probs=54.9

Q ss_pred             EEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCe-----eEecCCCccHHHHHHhHCCCCccEEEeC
Q 028523           21 YVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDE-----AFNYKEEPDLDAALKRYFPEGINIYFEN   95 (208)
Q Consensus        21 ~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~-----v~~~~~~~~~~~~~~~~~~~~~d~v~d~   95 (208)
                      +|+|+|+ |.+|......+...|.+|...++++++.+... ..+...     .+..    +..+.+.     .+|++|-+
T Consensus         2 kI~IiGa-G~iG~~~a~~L~~~G~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~----~~~~~~~-----~~D~iii~   70 (167)
T d1ks9a2           2 KITVLGC-GALGQLWLTALCKQGHEVQGWLRVPQPYCSVN-LVETDGSIFNESLTA----NDPDFLA-----TSDLLLVT   70 (167)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCCSEEEEE-EECTTSCEEEEEEEE----SCHHHHH-----TCSEEEEC
T ss_pred             EEEEECc-CHHHHHHHHHHHHCCCceEEEEcCHHHhhhhc-cccCCcccccccccc----chhhhhc-----ccceEEEe
Confidence            5899996 99999888877788999999998876544332 223211     1111    1122222     48999999


Q ss_pred             CCchhHHHHHHhh----ccCCEEEEE
Q 028523           96 VGGKMLDAVLLNM----RIQGRITLC  117 (208)
Q Consensus        96 ~g~~~~~~~~~~l----~~~G~~v~~  117 (208)
                      +-.......++.+    .++..++.+
T Consensus        71 vka~~~~~~~~~l~~~~~~~~~Iv~~   96 (167)
T d1ks9a2          71 LKAWQVSDAVKSLASTLPVTTPILLI   96 (167)
T ss_dssp             SCGGGHHHHHHHHHTTSCTTSCEEEE
T ss_pred             ecccchHHHHHhhccccCcccEEeec
Confidence            9876555555444    445556654

>d1ydwa1 c.2.1.3 (A:6-133,A:305-360) Probable oxidoreductase At4g09670 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Probable oxidoreductase At4g09670
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=96.05  E-value=0.05  Score=35.85  Aligned_cols=90  Identities=11%  Similarity=0.106  Sum_probs=59.3

Q ss_pred             EEEEecCCchHHHHHHHHHHHc-CCEEEEE-eCCHHHHHHHHHhcCCCe-eEecCCCccHHHHHHhHCCCCccEEEeCCC
Q 028523           21 YVFVSAASGAVGQLVGQFAKLV-GCYVVGS-AGSKDKVDLLKNKFGFDE-AFNYKEEPDLDAALKRYFPEGINIYFENVG   97 (208)
Q Consensus        21 ~vli~ga~g~vG~~a~qla~~~-g~~v~~~-~~s~~~~~~~~~~~g~~~-v~~~~~~~~~~~~~~~~~~~~~d~v~d~~g   97 (208)
                      ++.|.| +|.+|...++..+.. +.+++++ ++++++.+.+.++++... .-.++   ++.+.+.+   ..+|+|+.++.
T Consensus         3 ki~iIG-~G~~g~~~~~~l~~~~~~~i~ai~d~~~~~~~~~~~~~~~~~~~~~~~---~~~~ll~~---~~iD~v~I~tp   75 (184)
T d1ydwa1           3 RIGVMG-CADIARKVSRAIHLAPNATISGVASRSLEKAKAFATANNYPESTKIHG---SYESLLED---PEIDALYVPLP   75 (184)
T ss_dssp             EEEEES-CCTTHHHHHHHHHHCTTEEEEEEECSSHHHHHHHHHHTTCCTTCEEES---SHHHHHHC---TTCCEEEECCC
T ss_pred             EEEEEc-CCHHHHHHHHHHHhCCCCEEEEEEeCCccccccchhccccccceeecC---cHHHhhhc---cccceeeeccc
Confidence            477889 599999888888776 5688865 456666666554777532 11122   45554432   25999999998


Q ss_pred             c-hhHHHHHHhhccCCEEEEEe
Q 028523           98 G-KMLDAVLLNMRIQGRITLCG  118 (208)
Q Consensus        98 ~-~~~~~~~~~l~~~G~~v~~g  118 (208)
                      . ..++.+..++..|=. +.+.
T Consensus        76 ~~~h~~~~~~~l~~g~~-v~~E   96 (184)
T d1ydwa1          76 TSLHVEWAIKAAEKGKH-ILLE   96 (184)
T ss_dssp             GGGHHHHHHHHHTTTCE-EEEC
T ss_pred             chhhcchhhhhhhccce-eecc
Confidence            4 577788888887655 4443

>d1zh8a1 c.2.1.3 (A:4-131,A:276-328) Hypothetical protein TM0312 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Hypothetical protein TM0312
species: Thermotoga maritima [TaxId: 2336]

Probab=96.02  E-value=0.098  Score=34.28  Aligned_cols=136  Identities=11%  Similarity=0.021  Sum_probs=77.0

Q ss_pred             EEEEecCCchHHHH-HHHHHHHc-C-CEEEEE-eCCHHHHHHHHHhcCCCeeEecCCCccHHHHHHhHCCCCccEEEeCC
Q 028523           21 YVFVSAASGAVGQL-VGQFAKLV-G-CYVVGS-AGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENV   96 (208)
Q Consensus        21 ~vli~ga~g~vG~~-a~qla~~~-g-~~v~~~-~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~d~v~d~~   96 (208)
                      +|.|.| +|.+|.- .+...+.. + .+++++ ++++++.+.+.++++...+++     ++.+.+.   ...+|+|+.|+
T Consensus         5 rigiIG-~G~~g~~~h~~~l~~~~~~~~i~~v~d~~~~~~~~~~~~~~~~~~~~-----~~~ell~---~~~id~v~I~t   75 (181)
T d1zh8a1           5 RLGIVG-CGIAARELHLPALKNLSHLFEITAVTSRTRSHAEEFAKMVGNPAVFD-----SYEELLE---SGLVDAVDLTL   75 (181)
T ss_dssp             EEEEEC-CSHHHHHTHHHHHHTTTTTEEEEEEECSSHHHHHHHHHHHSSCEEES-----CHHHHHH---SSCCSEEEECC
T ss_pred             EEEEEc-CCHHHHHHHHHHHHhCCCCeEEEEEEeccHhhhhhhhccccccceee-----eeecccc---ccccceeeccc
Confidence            578889 5999864 46666654 3 377755 455666666655788765542     5555443   23599999998


Q ss_pred             Cc-hhHHHHHHhhccCCEEEEEecccccCCCCCCCccchHHH---hh-cceeE-EEeeccccccchHHHHHHHHHHHHCC
Q 028523           97 GG-KMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCL---IS-KRIRM-EGFLVPDYFHLYPKFLEMMIPRIKEG  170 (208)
Q Consensus        97 g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~---~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~g  170 (208)
                      .. ...+.+..++..|-+ +.+.-+...    .  ......+   .. ++..+ .+....  .......+.++.+++.+|
T Consensus        76 p~~~h~~~~~~al~~gk~-V~~EKPl~~----~--~~e~~~l~~~~~~~~~~~~v~~~~R--~~~~~~~~~~~~~~i~~G  146 (181)
T d1zh8a1          76 PVELNLPFIEKALRKGVH-VICEKPIST----D--VETGKKVVELSEKSEKTVYIAENFR--ENSYQKEFEDFYQVVAEG  146 (181)
T ss_dssp             CGGGHHHHHHHHHHTTCE-EEEESSSSS----S--HHHHHHHHHHHHHCSSCEEEECGGG--CCHHHHHHHHHHHHHHSC
T ss_pred             cccccccccccccccchh-hhcCCCCcC----C--HHHHHHHHHHHHHhCCeEEEEeecc--ccccCHHHHHHHHHHHCC
Confidence            85 467777777777644 454443210    0  0011111   11 22222 222211  122456678888999998


Q ss_pred             Ccee
Q 028523          171 KIVY  174 (208)
Q Consensus       171 ~~~~  174 (208)
                      .+..
T Consensus       147 ~ig~  150 (181)
T d1zh8a1         147 KPND  150 (181)
T ss_dssp             CCCS
T ss_pred             CCcc
Confidence            8743

>d1xj5a_ c.66.1.17 (A:) Spermidine synthase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Spermidine synthase
domain: Spermidine synthase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=96.01  E-value=0.027  Score=40.25  Aligned_cols=99  Identities=16%  Similarity=0.075  Sum_probs=65.1

Q ss_pred             CCCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHhcC-------CCe-eEecCCCccHHHHHHhHCC
Q 028523           16 PKQGEYVFVSAASGAVGQLVGQFAKLVGC-YVVGSAGSKDKVDLLKNKFG-------FDE-AFNYKEEPDLDAALKRYFP   86 (208)
Q Consensus        16 ~~~g~~vli~ga~g~vG~~a~qla~~~g~-~v~~~~~s~~~~~~~~~~~g-------~~~-v~~~~~~~~~~~~~~~~~~   86 (208)
                      ....++|||.|+  |-|..+-.++++.+. +|.++..+++=.+.+++-+.       .+. .+-.  . +..+.+++...
T Consensus        78 ~~~pk~VLiiGg--G~G~~~r~~l~~~~~~~i~~VEiD~~Vi~~~~~~f~~~~~~~~~~r~~i~~--~-Da~~~l~~~~~  152 (290)
T d1xj5a_          78 IPNPKKVLVIGG--GDGGVLREVARHASIEQIDMCEIDKMVVDVSKQFFPDVAIGYEDPRVNLVI--G-DGVAFLKNAAE  152 (290)
T ss_dssp             SSCCCEEEEETC--SSSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGSTTEEEEE--S-CHHHHHHTSCT
T ss_pred             CCCCcceEEecC--CchHHHHHHHhcccceeeEEecCCHHHHHHHHHhchhhhccccCCCcEEEE--c-cHHHHHhhccc
Confidence            345678999995  446666677887776 89999999887777773221       111 1111  1 45556665544


Q ss_pred             CCccEEE-eCCCc----------hhHHHHHHhhccCCEEEEEec
Q 028523           87 EGINIYF-ENVGG----------KMLDAVLLNMRIQGRITLCGM  119 (208)
Q Consensus        87 ~~~d~v~-d~~g~----------~~~~~~~~~l~~~G~~v~~g~  119 (208)
                      +.+|+|| |+...          +.++.+.++|+++|.++.-..
T Consensus       153 ~~yDvIi~D~~dp~~~~~~L~t~eF~~~~~~~L~~~Gi~v~q~~  196 (290)
T d1xj5a_         153 GSYDAVIVDSSDPIGPAKELFEKPFFQSVARALRPGGVVCTQAE  196 (290)
T ss_dssp             TCEEEEEECCCCTTSGGGGGGSHHHHHHHHHHEEEEEEEEEECC
T ss_pred             cCccEEEEcCCCCCCcchhhCCHHHHHHHHHhcCCCcEEEEecC
Confidence            5799776 33321          147888999999999987543

>d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Negative transcriptional regulator NmrA
species: Aspergillus nidulans [TaxId: 162425]

Probab=96.00  E-value=0.024  Score=41.40  Aligned_cols=38  Identities=26%  Similarity=0.211  Sum_probs=33.4

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHH
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDK   55 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~   55 (208)
                      +-++|+|+||+|.+|...+..+...|.+|++++|+..+
T Consensus         2 ~kktIlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~   39 (350)
T d1xgka_           2 QKKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKG   39 (350)
T ss_dssp             CCCCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSCS
T ss_pred             CCCEEEEECCChHHHHHHHHHHHhCCCeEEEEECCcch
Confidence            34689999999999999999988899999999987654

>d1mo9a2 c.3.1.5 (A:193-313) NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase {Xanthobacter sp., py2 [TaxId: 35809]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase
species: Xanthobacter sp., py2 [TaxId: 35809]

Probab=96.00  E-value=0.013  Score=35.98  Aligned_cols=46  Identities=17%  Similarity=0.071  Sum_probs=37.5

Q ss_pred             HHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCH
Q 028523            6 AYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSK   53 (208)
Q Consensus         6 A~~~l~~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~   53 (208)
                      +...+ +.....++++++|.|| |.+|+-.++.++..|.+|.++.+++
T Consensus        10 ~~~~~-~~l~~~~~~~vvVvGg-G~ig~E~A~~l~~~g~~vt~i~~~~   55 (121)
T d1mo9a2          10 HATLV-EELDYEPGSTVVVVGG-SKTAVEYGCFFNATGRRTVMLVRTE   55 (121)
T ss_dssp             HHHHH-HHCCSCCCSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred             HHHHH-HHHhhCCCCEEEEECC-CHHHHHHHHHHHhcchhheEeeccc
Confidence            33333 4456778899999996 9999999999999999999999765

>d1n1ea2 c.2.1.6 (A:9-197) Glycerol-3- phosphate dehydrogenase {Trypanosome (Leishmania mexicana) [TaxId: 5665]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Glycerol-3- phosphate dehydrogenase
species: Trypanosome (Leishmania mexicana) [TaxId: 5665]

Probab=95.98  E-value=0.016  Score=38.70  Aligned_cols=81  Identities=15%  Similarity=0.131  Sum_probs=56.5

Q ss_pred             CEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCC--C----eeE----ecCCCccHHHHHHhHCCCCc
Q 028523           20 EYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGF--D----EAF----NYKEEPDLDAALKRYFPEGI   89 (208)
Q Consensus        20 ~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~--~----~v~----~~~~~~~~~~~~~~~~~~~~   89 (208)
                      .+|.|+|+ |..|.+.+.++...|.+|....++++..+.+.+ -+.  .    ..+    ... . ++.+.+.     +.
T Consensus         8 ~KI~ViGa-G~wGtAlA~~La~~g~~V~l~~r~~~~~~~i~~-~~~n~~yl~~~~l~~~i~~t-~-~l~~a~~-----~a   78 (189)
T d1n1ea2           8 NKAVVFGS-GAFGTALAMVLSKKCREVCVWHMNEEEVRLVNE-KRENVLFLKGVQLASNITFT-S-DVEKAYN-----GA   78 (189)
T ss_dssp             EEEEEECC-SHHHHHHHHHHHTTEEEEEEECSCHHHHHHHHH-HTBCTTTSTTCBCCTTEEEE-S-CHHHHHT-----TC
T ss_pred             ceEEEECC-CHHHHHHHHHHHHcCCeEEEEEecHHHHHHHhh-cccccccccccccccccccc-h-hhhhccC-----CC
Confidence            36999996 999999998888888899999999988887763 221  0    011    111 1 3444443     37


Q ss_pred             cEEEeCCCchhHHHHHHhhc
Q 028523           90 NIYFENVGGKMLDAVLLNMR  109 (208)
Q Consensus        90 d~v~d~~g~~~~~~~~~~l~  109 (208)
                      |+++-++++..+...++.+.
T Consensus        79 d~iiiavPs~~~~~~~~~~~   98 (189)
T d1n1ea2          79 EIILFVIPTQFLRGFFEKSG   98 (189)
T ss_dssp             SCEEECSCHHHHHHHHHHHC
T ss_pred             CEEEEcCcHHHHHHHHHHHH
Confidence            99999999887777766544

>d1sc6a1 c.2.1.4 (A:108-295) Phosphoglycerate dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Phosphoglycerate dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=95.90  E-value=0.043  Score=36.45  Aligned_cols=86  Identities=16%  Similarity=0.126  Sum_probs=61.1

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHHHHhHCCCCccEEEeCCC
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVG   97 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~d~v~d~~g   97 (208)
                      .+.+|.|+| .|.+|...+++++..|.+|+..++....        .......+.   ++.+.+++     .|++..+.+
T Consensus        43 ~~~~vgiiG-~G~IG~~va~~l~~fg~~v~~~d~~~~~--------~~~~~~~~~---~l~ell~~-----sDii~i~~p  105 (188)
T d1sc6a1          43 RGKKLGIIG-YGHIGTQLGILAESLGMYVYFYDIENKL--------PLGNATQVQ---HLSDLLNM-----SDVVSLHVP  105 (188)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSCCC--------CCTTCEECS---CHHHHHHH-----CSEEEECCC
T ss_pred             cceEEEEee-cccchhhhhhhcccccceEeeccccccc--------hhhhhhhhh---hHHHHHhh-----ccceeeccc
Confidence            578999999 5999999999999999999999865321        111111121   45554443     688888766


Q ss_pred             -ch-----hHHHHHHhhccCCEEEEEecc
Q 028523           98 -GK-----MLDAVLLNMRIQGRITLCGMI  120 (208)
Q Consensus        98 -~~-----~~~~~~~~l~~~G~~v~~g~~  120 (208)
                       .+     .-...+..|+++..+|.++..
T Consensus       106 lt~~T~~li~~~~l~~mk~~a~lIN~aRG  134 (188)
T d1sc6a1         106 ENPSTKNMMGAKEISLMKPGSLLINASRG  134 (188)
T ss_dssp             SSTTTTTCBCHHHHHHSCTTEEEEECSCS
T ss_pred             CCcchhhhccHHHHhhCCCCCEEEEcCcH
Confidence             33     246788899999999887663

>d3etja2 c.30.1.1 (A:1-78) N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), N-domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), N-domain
species: Escherichia coli [TaxId: 562]

Probab=95.90  E-value=0.0037  Score=35.30  Aligned_cols=35  Identities=20%  Similarity=0.239  Sum_probs=30.4

Q ss_pred             CEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHH
Q 028523           20 EYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDK   55 (208)
Q Consensus        20 ~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~   55 (208)
                      ++|.|.|+ |.+|.+.++-++.+|.++++.+..++.
T Consensus         2 k~vgIlG~-GQLgrMl~~Aa~~LG~~v~vldp~~~~   36 (78)
T d3etja2           2 KQVCVLGN-GQLGRMLRQAGEPLGIAVWPVGLDAEP   36 (78)
T ss_dssp             EEEEEEBC-SHHHHHHHHHHGGGTEEEEEECTTSCG
T ss_pred             CEEEEEcC-CHHHHHHHHHHHHcCCEEEEEcCCCCC
Confidence            47899995 999999999999999999999965443

>d1cf2o1 c.2.1.3 (O:1-138,O:304-336) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Methanothermus fervidus [TaxId: 2180]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Archaeon Methanothermus fervidus [TaxId: 2180]

Probab=95.90  E-value=0.072  Score=34.75  Aligned_cols=96  Identities=16%  Similarity=0.100  Sum_probs=57.7

Q ss_pred             EEEEecCCchHHHHHHHHHHHcC-CEEEEEeCC--HHHHHHHHHhcCCCeeEecCCCccHHHHHH-hHC--------CCC
Q 028523           21 YVFVSAASGAVGQLVGQFAKLVG-CYVVGSAGS--KDKVDLLKNKFGFDEAFNYKEEPDLDAALK-RYF--------PEG   88 (208)
Q Consensus        21 ~vli~ga~g~vG~~a~qla~~~g-~~v~~~~~s--~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~-~~~--------~~~   88 (208)
                      +|.|.| .|-+|....+.+...+ .+++.+...  ......+. .++.+......+  .....-. .+.        ..+
T Consensus         3 ~VgING-fGRIGR~v~R~l~~~~di~vvaInd~~~~~~~~~l~-~~~~~~~~~~~~--~~~~~~~~~~~v~g~~~~~~~~   78 (171)
T d1cf2o1           3 AVAING-YGTVGKRVADAIAQQDDMKVIGVSKTRPDFEARMAL-KKGYDLYVAIPE--RVKLFEKAGIEVAGTVDDMLDE   78 (171)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHTSSSEEEEEEEESSCSHHHHHHH-HTTCCEEESSGG--GHHHHHHTTCCCCEEHHHHHHT
T ss_pred             EEEEEc-CcHHHHHHHHHHHhCCCceEEEEecCCcHHHHHHHH-hcCCceEecccc--cceeecccCcccCCChhHhhcC
Confidence            578998 6999999999876654 477765532  23344555 555443221111  1111000 000        015


Q ss_pred             ccEEEeCCC-chhHHHHHHhhccCCEEEEEecc
Q 028523           89 INIYFENVG-GKMLDAVLLNMRIQGRITLCGMI  120 (208)
Q Consensus        89 ~d~v~d~~g-~~~~~~~~~~l~~~G~~v~~g~~  120 (208)
                      +|+|+||+| ....+.+-..+..|-+.+..+..
T Consensus        79 vDvViEcTG~f~~~~~~~~hl~~G~K~vi~~~~  111 (171)
T d1cf2o1          79 ADIVIDCTPEGIGAKNLKMYKEKGIKAIFQGGE  111 (171)
T ss_dssp             CSEEEECCSTTHHHHHHHHHHHTTCEEEECTTS
T ss_pred             CCEEEEccCCCCCHHHHHHHHHcCCCEEEECCC
Confidence            999999999 46667777788888887776543

>d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose-3', 5'-epimerase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=95.90  E-value=0.012  Score=43.20  Aligned_cols=75  Identities=20%  Similarity=0.243  Sum_probs=47.1

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHHHHhHCCCCccEEEeCCC
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVG   97 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~d~v~d~~g   97 (208)
                      .+-+|||+||+|-+|...+..+...|.+|+++++...... .. ........ .-+..+........  .++|.|+.+.+
T Consensus        14 ~nMKILVTGgsGfIGs~lv~~L~~~g~~V~~~d~~~~~~~-~~-~~~~~~~~-~~D~~~~~~~~~~~--~~~d~Vih~a~   88 (363)
T d2c5aa1          14 ENLKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHM-TE-DMFCDEFH-LVDLRVMENCLKVT--EGVDHVFNLAA   88 (363)
T ss_dssp             SCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCSSS-CG-GGTCSEEE-ECCTTSHHHHHHHH--TTCSEEEECCC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEeCCCccch-hh-hcccCcEE-EeechhHHHHHHHh--hcCCeEeeccc
Confidence            5678999999999999999999999999999875433211 11 12222221 11211333333322  25899998774

>d1oi7a1 c.2.1.8 (A:1-121) Succinyl-CoA synthetase, alpha-chain, N-terminal (CoA-binding) domain {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Succinyl-CoA synthetase, alpha-chain, N-terminal (CoA-binding) domain
species: Thermus thermophilus [TaxId: 274]

Probab=95.89  E-value=0.079  Score=32.17  Aligned_cols=90  Identities=14%  Similarity=0.118  Sum_probs=58.9

Q ss_pred             CCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHHHHhHCCCCccEEEeC
Q 028523           16 PKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFEN   95 (208)
Q Consensus        16 ~~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~d~v~d~   95 (208)
                      +.++.+|+|.|-+|.-|....+.++.+|-++++-+...+.-+...   | -.+||     ...+.+++ +  ++|.-+-+
T Consensus         4 i~k~trVivQGiTG~~G~~ht~~m~~yGT~iVaGVtPgkgG~~~~---g-iPVf~-----tV~eAv~~-~--~~d~SvIf   71 (121)
T d1oi7a1           4 VNRETRVLVQGITGREGQFHTKQMLTYGTKIVAGVTPGKGGMEVL---G-VPVYD-----TVKEAVAH-H--EVDASIIF   71 (121)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHHTCEEEEEECTTCTTCEET---T-EEEES-----SHHHHHHH-S--CCSEEEEC
T ss_pred             ecCCCcEEEEcCCCcHHHHHHHHHHHhCCceEeeeecCCCCcEEE---C-CchHh-----hHHHHHHh-c--CCeEEEEe
Confidence            457789999999999999999999999999998884432211110   1 12442     45555544 3  36777777


Q ss_pred             CCc-hhHHHHHHhhccCCEEEEE
Q 028523           96 VGG-KMLDAVLLNMRIQGRITLC  117 (208)
Q Consensus        96 ~g~-~~~~~~~~~l~~~G~~v~~  117 (208)
                      ++. -..+.+++.+..+=.++.+
T Consensus        72 VPp~~a~dAi~EAi~agI~liv~   94 (121)
T d1oi7a1          72 VPAPAAADAALEAAHAGIPLIVL   94 (121)
T ss_dssp             CCHHHHHHHHHHHHHTTCSEEEE
T ss_pred             eCHHHHHHHHHHHHhCCCcEEEE
Confidence            774 3556667777666555443

>d2gz1a1 c.2.1.3 (A:2-127,A:330-357) Aspartate beta-semialdehyde dehydrogenase {Streptococcus pneumoniae [TaxId: 1313]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Aspartate beta-semialdehyde dehydrogenase
species: Streptococcus pneumoniae [TaxId: 1313]

Probab=95.89  E-value=0.02  Score=36.80  Aligned_cols=146  Identities=13%  Similarity=0.011  Sum_probs=74.4

Q ss_pred             CCEEEEecCCchHHHHHHHHHHHcCC---EEEEEeCCHHHHHHHHHhcCCCe--eEecCCCccHHHHHHhHCCCCccEEE
Q 028523           19 GEYVFVSAASGAVGQLVGQFAKLVGC---YVVGSAGSKDKVDLLKNKFGFDE--AFNYKEEPDLDAALKRYFPEGINIYF   93 (208)
Q Consensus        19 g~~vli~ga~g~vG~~a~qla~~~g~---~v~~~~~s~~~~~~~~~~~g~~~--v~~~~~~~~~~~~~~~~~~~~~d~v~   93 (208)
                      |=+|.|.||||-+|.-.++++.....   ++...+ |.+...... ......  ..+..+. +         ....|++|
T Consensus         1 g~kVaIvGATGyvG~eLirlL~~H~fp~~~l~~~~-s~~s~G~~~-~~~~~~~~~~~~~~~-~---------~~~~d~~f   68 (154)
T d2gz1a1           1 GYTVAVVGATGAVGAQMIKMLEESTLPIDKIRYLA-SARSAGKSL-KFKDQDITIEETTET-A---------FEGVDIAL   68 (154)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHTCCSCEEEEEEEE-CGGGTTCEE-EETTEEEEEEECCTT-T---------TTTCSEEE
T ss_pred             CCEEEEECCCcHHHHHHHHHHHcCCCCceEEEEec-ccccccccc-cccCCcccccccchh-h---------hhhhhhhh
Confidence            34789999999999999999976642   555555 332211000 011111  1111111 1         11589999


Q ss_pred             eCCCc-hhHHHHHHhhccCCEEEEEecccccCCCCCCCccchHHHhhcceeEEEeeccccccchHHHHHHHHHHHHCCCc
Q 028523           94 ENVGG-KMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCLISKRIRMEGFLVPDYFHLYPKFLEMMIPRIKEGKI  172 (208)
Q Consensus        94 d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~  172 (208)
                      -+.+. .......+....+-+++..+..-..  . +....-........+.-....+..--. ....+.-+.-+.++|.+
T Consensus        69 ~~~~~~~s~~~~~~~~~~~~~VIDlSsdfR~--~-~~~~~~~pe~n~~~~~~~~~iIAnPgC-~tt~i~~l~PL~~~~li  144 (154)
T d2gz1a1          69 FSAGSSTSAKYAPYAVKAGVVVVDNTSYFRQ--N-PDVPLVVPEVNAHALDAHNGIIACPNA-AWNSVQIAETLHERGLV  144 (154)
T ss_dssp             ECSCHHHHHHHHHHHHHTTCEEEECSSTTTT--C-TTSCBCCHHHHGGGGGGCCSEEECCCT-HHHHHHHHHHHHHTTCC
T ss_pred             hccCccchhhHHhhhccccceehhcChhhhc--c-CCcccccchhhHHHhcCcCceEECCCC-HHHHHHHHHHHHHhcCC
Confidence            99984 5666666677778888887654321  1 111111112211111100000111011 12233346788899999


Q ss_pred             eeeeeeee
Q 028523          173 VYVEDKAE  180 (208)
Q Consensus       173 ~~~~~~~~  180 (208)
                      ++....+|
T Consensus       145 k~~~~~~~  152 (154)
T d2gz1a1         145 RPTAELKF  152 (154)
T ss_dssp             SCCSSCCS
T ss_pred             Cccceeee
Confidence            88765444

>d1nhpa2 c.3.1.5 (A:120-242) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH peroxidase
species: Enterococcus faecalis [TaxId: 1351]

Probab=95.88  E-value=0.016  Score=35.79  Aligned_cols=43  Identities=14%  Similarity=-0.007  Sum_probs=35.2

Q ss_pred             HHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCH
Q 028523           10 FFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSK   53 (208)
Q Consensus        10 l~~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~   53 (208)
                      +.+...-+++++|+|.|| |.+|+-+++.+..+|.+|.++.+++
T Consensus        21 i~~~~~~~~~k~vvViGg-G~iG~E~A~~l~~~g~~Vtlie~~~   63 (123)
T d1nhpa2          21 LKQKTVDPEVNNVVVIGS-GYIGIEAAEAFAKAGKKVTVIDILD   63 (123)
T ss_dssp             HHHHHTCTTCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred             HHHHhhccCCCEEEEECC-hHHHHHHHHHhhccceEEEEEEecC
Confidence            334444566789999996 9999999999999999999998664

>d2p7ia1 c.66.1.41 (A:22-246) Hypothetical protein ECA1738 {Erwinia carotovora [TaxId: 554]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: UbiE/COQ5-like
domain: Hypothetical protein ECA1738
species: Erwinia carotovora [TaxId: 554]

Probab=95.84  E-value=0.028  Score=38.39  Aligned_cols=98  Identities=7%  Similarity=-0.006  Sum_probs=61.4

Q ss_pred             HHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCC-eeEecCCCccHHHHHHhHC-C
Q 028523            9 GFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFD-EAFNYKEEPDLDAALKRYF-P   86 (208)
Q Consensus         9 ~l~~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~-~v~~~~~~~~~~~~~~~~~-~   86 (208)
                      .+....+..++++||=.|+  |.|..+..+++ .|.+|++++.|++..+.+++.+.-. ..+. .   ++.    +.. +
T Consensus        11 ~~~~~~~~~~~~~VLDiGc--G~G~~~~~l~~-~g~~v~giD~s~~~i~~a~~~~~~~~~~~~-~---~~~----~~~~~   79 (225)
T d2p7ia1          11 MVRAFTPFFRPGNLLELGS--FKGDFTSRLQE-HFNDITCVEASEEAISHAQGRLKDGITYIH-S---RFE----DAQLP   79 (225)
T ss_dssp             HHHHHGGGCCSSCEEEESC--TTSHHHHHHTT-TCSCEEEEESCHHHHHHHHHHSCSCEEEEE-S---CGG----GCCCS
T ss_pred             HHHHhhhhCCCCcEEEEeC--CCcHHHHHHHH-cCCeEEEEeCcHHHhhhhhccccccccccc-c---ccc----ccccc
Confidence            3444455567788998884  55776666654 5789999999999999998554321 1221 1   111    112 2


Q ss_pred             CCccEEEeCCCc-------hhHHHHH-HhhccCCEEEEE
Q 028523           87 EGINIYFENVGG-------KMLDAVL-LNMRIQGRITLC  117 (208)
Q Consensus        87 ~~~d~v~d~~g~-------~~~~~~~-~~l~~~G~~v~~  117 (208)
                      +.||+|+..---       ..+.... ++|+|||.++..
T Consensus        80 ~~fD~I~~~~vleh~~d~~~~l~~i~~~~Lk~gG~l~i~  118 (225)
T d2p7ia1          80 RRYDNIVLTHVLEHIDDPVALLKRINDDWLAEGGRLFLV  118 (225)
T ss_dssp             SCEEEEEEESCGGGCSSHHHHHHHHHHTTEEEEEEEEEE
T ss_pred             cccccccccceeEecCCHHHHHHHHHHHhcCCCceEEEE
Confidence            379999753211       1355565 578999998764

>d3cuma2 c.2.1.6 (A:1-162) Hydroxyisobutyrate dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=95.81  E-value=0.082  Score=34.03  Aligned_cols=43  Identities=16%  Similarity=0.034  Sum_probs=36.3

Q ss_pred             EEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCC
Q 028523           21 YVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGF   65 (208)
Q Consensus        21 ~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~   65 (208)
                      +|.+.| .|.+|...+.-+...|.+|++.++++++.+.+. ..+.
T Consensus         3 kIg~IG-lG~MG~~iA~~L~~~g~~v~~~d~~~~~~~~~~-~~~~   45 (162)
T d3cuma2           3 QIAFIG-LGHMGAPMATNLLKAGYLLNVFDLVQSAVDGLV-AAGA   45 (162)
T ss_dssp             EEEEEC-CSTTHHHHHHHHHHTTCEEEEECSSHHHHHHHH-HTTC
T ss_pred             EEEEEE-EHHHHHHHHHHHHHCCCeEEEEECchhhhhhhh-hhhc
Confidence            588888 699999888777778999999999999988887 6665

>d3lada2 c.3.1.5 (A:159-277) Dihydrolipoamide dehydrogenase {Azotobacter vinelandii [TaxId: 354]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Azotobacter vinelandii [TaxId: 354]

Probab=95.81  E-value=0.008  Score=36.95  Aligned_cols=46  Identities=15%  Similarity=0.135  Sum_probs=36.3

Q ss_pred             hhHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCH
Q 028523            4 MTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSK   53 (208)
Q Consensus         4 ~tA~~~l~~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~   53 (208)
                      .|+..+| +..  +..++++|.|| |.+|+-+++.+..+|.+|.++.+++
T Consensus        10 ~~s~~~l-~l~--~~p~~i~IiG~-G~ig~E~A~~l~~~G~~Vtiv~~~~   55 (119)
T d3lada2          10 VDSTGAL-DFQ--NVPGKLGVIGA-GVIGLELGSVWARLGAEVTVLEAMD   55 (119)
T ss_dssp             EEHHHHT-SCS--SCCSEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred             EchhHhh-Ccc--cCCCeEEEECC-ChHHHHHHHHHHHcCCceEEEEeec
Confidence            4556665 322  34488999996 9999999999999999999999664

>d1b7go1 c.2.1.3 (O:1-138,O:301-340) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Sulfolobus solfataricus [TaxId: 2287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

Probab=95.78  E-value=0.021  Score=37.70  Aligned_cols=93  Identities=14%  Similarity=0.145  Sum_probs=54.3

Q ss_pred             EEEEecCCchHHHHHHHHHHHc-CCEEEEEeCC--HHHHHHHHHhcCCCeeEecCCCccHHHHHHhH----CC------C
Q 028523           21 YVFVSAASGAVGQLVGQFAKLV-GCYVVGSAGS--KDKVDLLKNKFGFDEAFNYKEEPDLDAALKRY----FP------E   87 (208)
Q Consensus        21 ~vli~ga~g~vG~~a~qla~~~-g~~v~~~~~s--~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~----~~------~   87 (208)
                      +|.|.| .|-+|...++.+... ..+++++...  ......+. ..+......  +. ... .+.+.    .+      .
T Consensus         3 KVaING-fGRIGR~v~Ral~~~~dievVaInd~~~~~~~~~~~-~~~~~~~~~--~~-~~~-~~~~~~i~v~g~~~~~~~   76 (178)
T d1b7go1           3 NVAVNG-YGTIGKRVADAIIKQPDMKLVGVAKTSPNYEAFIAH-RRGIRIYVP--QQ-SIK-KFEESGIPVAGTVEDLIK   76 (178)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHTCTTEEEEEEECSSCSHHHHHHH-HTTCCEECC--GG-GHH-HHHTTTCCCCCCHHHHHH
T ss_pred             EEEEEC-CCHHHHHHHHHHHhCCCCEEEEEECCCCcHHHHHhc-ccCcceecc--Cc-cce-eccccceecCCchhhhhh
Confidence            578998 699999999988765 4588877643  22333333 333221111  11 111 11110    00      1


Q ss_pred             CccEEEeCCC-chhHHHHHHhhccCCEEEEEec
Q 028523           88 GINIYFENVG-GKMLDAVLLNMRIQGRITLCGM  119 (208)
Q Consensus        88 ~~d~v~d~~g-~~~~~~~~~~l~~~G~~v~~g~  119 (208)
                      ++|+|+||+| ....+.+-..+..|-+++..+.
T Consensus        77 ~vDiViecTG~f~~~e~a~~hl~~G~KvIi~~~  109 (178)
T d1b7go1          77 TSDIVVDTTPNGVGAQYKPIYLQLQRNAIFQGG  109 (178)
T ss_dssp             HCSEEEECCSTTHHHHHHHHHHHTTCEEEECTT
T ss_pred             cCCEEEECCCCcCCHHHHHHHHHcCCEEEEECC
Confidence            4899999999 4566677777777767776544

>d1onfa2 c.3.1.5 (A:154-270) Glutathione reductase {Plasmodium falciparum [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Plasmodium falciparum [TaxId: 5833]

Probab=95.77  E-value=0.011  Score=36.15  Aligned_cols=39  Identities=13%  Similarity=0.030  Sum_probs=33.9

Q ss_pred             cCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCH
Q 028523           14 CSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSK   53 (208)
Q Consensus        14 ~~~~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~   53 (208)
                      ..++..++|+|.|| |.+|.-+++.+..+|.+|.++.+++
T Consensus        17 ~~l~~p~~v~IiGg-G~iG~E~A~~l~~~g~~Vtlv~~~~   55 (117)
T d1onfa2          17 FNIKESKKIGIVGS-GYIAVELINVIKRLGIDSYIFARGN   55 (117)
T ss_dssp             TTCCCCSEEEEECC-SHHHHHHHHHHHTTTCEEEEECSSS
T ss_pred             hccCCCCEEEEECC-chHHHHHHHHHHhccccceeeehhc
Confidence            35566789999996 9999999999999999999999764

>d1id1a_ c.2.1.9 (A:) Rck domain from putative potassium channel Kch {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Rck domain from putative potassium channel Kch
species: Escherichia coli [TaxId: 562]

Probab=95.76  E-value=0.11  Score=32.91  Aligned_cols=95  Identities=9%  Similarity=-0.026  Sum_probs=58.7

Q ss_pred             CCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHH-HHHHH--hcCCCeeEecCCCccHHHHHHhHCCCCccEEEeC
Q 028523           19 GEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKV-DLLKN--KFGFDEAFNYKEEPDLDAALKRYFPEGINIYFEN   95 (208)
Q Consensus        19 g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~-~~~~~--~~g~~~v~~~~~~~~~~~~~~~~~~~~~d~v~d~   95 (208)
                      -++++|.|. |.+|..+++.+...|.++++++..+++. +.+.+  ..|.. ++. -+. .-.+.+++..-..+|.++-+
T Consensus         3 knHiII~G~-g~~g~~l~~~L~~~~~~v~vId~d~~~~~~~~~~~~~~~~~-vi~-Gd~-~d~~~L~~a~i~~a~~vi~~   78 (153)
T d1id1a_           3 KDHFIVCGH-SILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRLGDNAD-VIP-GDS-NDSSVLKKAGIDRCRAILAL   78 (153)
T ss_dssp             CSCEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHCTTCE-EEE-SCT-TSHHHHHHHTTTTCSEEEEC
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCCCEEEEeccchhHHHHHHHhhcCCcE-EEE-ccC-cchHHHHHhccccCCEEEEc
Confidence            357899996 9999999999999999999998776543 23331  22332 332 222 22344555444468999988


Q ss_pred             CCchh----HHHHHHhhccCCEEEEE
Q 028523           96 VGGKM----LDAVLLNMRIQGRITLC  117 (208)
Q Consensus        96 ~g~~~----~~~~~~~l~~~G~~v~~  117 (208)
                      ++.+.    .....+.+.+.-+++..
T Consensus        79 ~~~d~~n~~~~~~~r~~~~~~~iia~  104 (153)
T d1id1a_          79 SDNDADNAFVVLSAKDMSSDVKTVLA  104 (153)
T ss_dssp             SSCHHHHHHHHHHHHHHTSSSCEEEE
T ss_pred             cccHHHHHHHHHHHHHhCCCCceEEE
Confidence            88542    22333445555565554

>d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Polymyxin resistance protein ArnA (PrmI)
species: Escherichia coli [TaxId: 562]

Probab=95.75  E-value=0.0061  Score=44.53  Aligned_cols=72  Identities=13%  Similarity=0.092  Sum_probs=45.2

Q ss_pred             EEEEecCCchHHHHHHHHHHHcC-CEEEEEeCCHHHHHHHHHhcCCCeeE--ecCCCccHHHHHHhHCCCCccEEEeCCC
Q 028523           21 YVFVSAASGAVGQLVGQFAKLVG-CYVVGSAGSKDKVDLLKNKFGFDEAF--NYKEEPDLDAALKRYFPEGINIYFENVG   97 (208)
Q Consensus        21 ~vli~ga~g~vG~~a~qla~~~g-~~v~~~~~s~~~~~~~~~~~g~~~v~--~~~~~~~~~~~~~~~~~~~~d~v~d~~g   97 (208)
                      +|||+||+|-+|..+++.+...| .+|++.++.......+.+.-+. ..+  |..+..++.+...+    ++|+|+.+++
T Consensus         2 KILITG~tGfiG~~l~~~Ll~~g~~~V~~ld~~~~~~~~~~~~~~~-~~i~~Di~~~~~~~~~~~~----~~d~Vih~a~   76 (342)
T d2blla1           2 RVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFLNHPHF-HFVEGDISIHSEWIEYHVK----KCDVVLPLVA   76 (342)
T ss_dssp             EEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGGGGTTCTTE-EEEECCTTTCSHHHHHHHH----HCSEEEECBC
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCCcchhhhccCCCe-EEEECccCChHHHHHHHHh----CCCccccccc
Confidence            58999999999999998777777 5899998765544433311111 222  22222133332222    4899999876

>d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=95.73  E-value=0.0077  Score=43.47  Aligned_cols=45  Identities=18%  Similarity=0.273  Sum_probs=34.8

Q ss_pred             CEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHH--HHHHHHHhcCC
Q 028523           20 EYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKD--KVDLLKNKFGF   65 (208)
Q Consensus        20 ~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~--~~~~~~~~~g~   65 (208)
                      .+|||+||+|-+|..++..+...|++|+++++...  ..+.++ .++.
T Consensus         1 k~vLItG~tGfiG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~l~-~~~~   47 (321)
T d1rpna_           1 RSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTRWRLR-ELGI   47 (321)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCHHHH-HTTC
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCCcccHHHHH-Hhcc
Confidence            47999999999999999988888999999997543  234444 4443

>d2nu7a1 c.2.1.8 (A:2-120) Succinyl-CoA synthetase, alpha-chain, N-terminal (CoA-binding) domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Succinyl-CoA synthetase, alpha-chain, N-terminal (CoA-binding) domain
species: Escherichia coli [TaxId: 562]

Probab=95.72  E-value=0.093  Score=31.73  Aligned_cols=89  Identities=17%  Similarity=0.184  Sum_probs=56.3

Q ss_pred             CCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHHHHhHCCCCccEEEeC
Q 028523           16 PKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFEN   95 (208)
Q Consensus        16 ~~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~d~v~d~   95 (208)
                      +.++.+|+|.|-+|.-|....+..+.+|-+|++-+...+.-+.   ..| -.+||     ...+.+++.   ++|.-+-+
T Consensus         3 i~k~trVlvQGiTG~~G~~ht~~m~~yGT~vVaGVtPgkgG~~---~~g-iPVf~-----sV~eAv~~~---~~~~SvIf   70 (119)
T d2nu7a1           3 IDKNTKVICQGFTGSQGTFHSEQAIAYGTKMVGGVTPGKGGTT---HLG-LPVFN-----TVREAVAAT---GATASVIY   70 (119)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHHTCEEEEEECTTCTTEE---ETT-EEEES-----SHHHHHHHH---CCCEEEEC
T ss_pred             ecCCCcEEEEcCCCcHHHHHHHHHHHhCCceEEEEccCCCCcc---cCC-Cchhh-----HHHHHHHHh---CCCeEEEe
Confidence            4577899999999999999999999999999988743221110   011 12432     444444442   35666666


Q ss_pred             CCc-hhHHHHHHhhccCCEEEE
Q 028523           96 VGG-KMLDAVLLNMRIQGRITL  116 (208)
Q Consensus        96 ~g~-~~~~~~~~~l~~~G~~v~  116 (208)
                      ++. -..+.+++.+..+=.++.
T Consensus        71 VPp~~a~dA~~EAi~agI~~iV   92 (119)
T d2nu7a1          71 VPAPFCKDSILEAIDAGIKLII   92 (119)
T ss_dssp             CCGGGHHHHHHHHHHTTCSEEE
T ss_pred             ccHHHHHHHHHHHHHCCCCEEE
Confidence            664 355566677766644433

>d1ebda2 c.3.1.5 (A:155-271) Dihydrolipoamide dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=95.60  E-value=0.012  Score=35.86  Aligned_cols=36  Identities=19%  Similarity=0.195  Sum_probs=31.7

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHH
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKD   54 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~   54 (208)
                      ..++++|.|| |.+|.-+++.+..+|.+|.++.+++.
T Consensus        21 ~p~~v~IiGg-G~ig~E~A~~l~~~G~~Vtlve~~~~   56 (117)
T d1ebda2          21 VPKSLVVIGG-GYIGIELGTAYANFGTKVTILEGAGE   56 (117)
T ss_dssp             CCSEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred             cCCeEEEECC-CccceeeeeeecccccEEEEEEecce
Confidence            3478999996 99999999999999999999987653

>d2fhpa1 c.66.1.46 (A:1-182) Putative methylase EF2452 {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: YhhF-like
domain: Putative methylase EF2452
species: Enterococcus faecalis [TaxId: 1351]

Probab=95.56  E-value=0.068  Score=35.24  Aligned_cols=103  Identities=14%  Similarity=0.185  Sum_probs=59.1

Q ss_pred             HHHHHhc-CCCCCCEEE-EecCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHH---hcCCCeeEecCCCccHHHHH
Q 028523            8 AGFFEVC-SPKQGEYVF-VSAASGAVGQLVGQFAKLVGC-YVVGSAGSKDKVDLLKN---KFGFDEAFNYKEEPDLDAAL   81 (208)
Q Consensus         8 ~~l~~~~-~~~~g~~vl-i~ga~g~vG~~a~qla~~~g~-~v~~~~~s~~~~~~~~~---~~g~~~v~~~~~~~~~~~~~   81 (208)
                      .++++.. ....|.+|| ++.|+|++|+.++    ..|+ +|+.++.+.+..+.+++   .++...-+..... +....+
T Consensus        30 ealFn~l~~~~~~~~vLDlfaGsG~~g~ea~----srGa~~v~~ve~~~~a~~~~~~N~~~~~~~~~~~i~~~-D~~~~l  104 (182)
T d2fhpa1          30 ESIFNMIGPYFDGGMALDLYSGSGGLAIEAV----SRGMDKSICIEKNFAALKVIKENIAITKEPEKFEVRKM-DANRAL  104 (182)
T ss_dssp             HHHHHHHCSCCSSCEEEETTCTTCHHHHHHH----HTTCSEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEES-CHHHHH
T ss_pred             HHHHHHHHHhcCCCEEEEcccccccccceee----ecchhHHHHHHHHHHHHHHHHHHhhhhhcccccccccc-cchhhh
Confidence            3444443 345788877 5556777776433    3678 89999999888777653   3454321111122 555555


Q ss_pred             HhHC--CCCccEEEeCCC--ch----hHHHHHH--hhccCCEEE
Q 028523           82 KRYF--PEGINIYFENVG--GK----MLDAVLL--NMRIQGRIT  115 (208)
Q Consensus        82 ~~~~--~~~~d~v~d~~g--~~----~~~~~~~--~l~~~G~~v  115 (208)
                      .+..  +..||+||---+  ..    .+....+  .|+++|.++
T Consensus       105 ~~~~~~~~~fDlIflDPPY~~~~~~~~l~~i~~~~~L~~~giIi  148 (182)
T d2fhpa1         105 EQFYEEKLQFDLVLLDPPYAKQEIVSQLEKMLERQLLTNEAVIV  148 (182)
T ss_dssp             HHHHHTTCCEEEEEECCCGGGCCHHHHHHHHHHTTCEEEEEEEE
T ss_pred             hhhcccCCCcceEEechhhhhhHHHHHHHHHHHCCCCCCCEEEE
Confidence            5542  227999986433  11    2333333  477777665

>d2gh1a1 c.66.1.49 (A:13-293) Methyltransferase BC2162 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: BC2162-like
domain: Methyltransferase BC2162
species: Bacillus cereus [TaxId: 1396]

Probab=95.55  E-value=0.052  Score=38.42  Aligned_cols=97  Identities=14%  Similarity=0.170  Sum_probs=64.8

Q ss_pred             cCCCCCCEEEEecCCchHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHhc---CCCeeEecCCCccHHHHHHhHCCCC
Q 028523           14 CSPKQGEYVFVSAASGAVGQLVGQFAKLV--GCYVVGSAGSKDKVDLLKNKF---GFDEAFNYKEEPDLDAALKRYFPEG   88 (208)
Q Consensus        14 ~~~~~g~~vli~ga~g~vG~~a~qla~~~--g~~v~~~~~s~~~~~~~~~~~---g~~~v~~~~~~~~~~~~~~~~~~~~   88 (208)
                      .++.++.+||=.|.  |.|..+..+++..  +.+|++++.|++-.+.+++.+   +....+...   +..+ + . .++.
T Consensus        23 ~~~~~~~~ILDiGc--G~G~~~~~la~~~~~~~~v~giD~s~~~l~~a~~~~~~~~~~~~f~~~---d~~~-~-~-~~~~   94 (281)
T d2gh1a1          23 WKITKPVHIVDYGC--GYGYLGLVLMPLLPEGSKYTGIDSGETLLAEARELFRLLPYDSEFLEG---DATE-I-E-LNDK   94 (281)
T ss_dssp             SCCCSCCEEEEETC--TTTHHHHHHTTTSCTTCEEEEEECCHHHHHHHHHHHHSSSSEEEEEES---CTTT-C-C-CSSC
T ss_pred             hccCCcCEEEEecC--cCCHHHHHHHHhCCCCCEEEEEecchhHhhhhhccccccccccccccc---cccc-c-c-ccCC
Confidence            36778889998883  4688888888875  569999999999887776432   322112111   1111 0 1 1236


Q ss_pred             ccEEEeCCC-------chhHHHHHHhhccCCEEEEEe
Q 028523           89 INIYFENVG-------GKMLDAVLLNMRIQGRITLCG  118 (208)
Q Consensus        89 ~d~v~d~~g-------~~~~~~~~~~l~~~G~~v~~g  118 (208)
                      +|+|+....       ...+..+.+.|+|||.++...
T Consensus        95 fD~v~~~~~l~~~~d~~~~l~~~~~~LkpgG~lii~~  131 (281)
T d2gh1a1          95 YDIAICHAFLLHMTTPETMLQKMIHSVKKGGKIICFE  131 (281)
T ss_dssp             EEEEEEESCGGGCSSHHHHHHHHHHTEEEEEEEEEEE
T ss_pred             ceEEEEehhhhcCCCHHHHHHHHHHHcCcCcEEEEEE
Confidence            999986432       135788999999999998765

>d2b2ca1 c.66.1.17 (A:3-314) Spermidine synthase {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Spermidine synthase
domain: Spermidine synthase
species: Caenorhabditis elegans [TaxId: 6239]

Probab=95.53  E-value=0.029  Score=40.43  Aligned_cols=100  Identities=13%  Similarity=0.089  Sum_probs=64.6

Q ss_pred             CCCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHhcCCC-eeE-----ecCCCccHHHHHHhHCCCC
Q 028523           16 PKQGEYVFVSAASGAVGQLVGQFAKLVGC-YVVGSAGSKDKVDLLKNKFGFD-EAF-----NYKEEPDLDAALKRYFPEG   88 (208)
Q Consensus        16 ~~~g~~vli~ga~g~vG~~a~qla~~~g~-~v~~~~~s~~~~~~~~~~~g~~-~v~-----~~~~~~~~~~~~~~~~~~~   88 (208)
                      -...++|||.|+  |-|..+-.++++... +|.++...++=.+.+++-+... ..+     ..... +..+.+++ +...
T Consensus       104 ~~~pk~VLIiGg--G~G~~~rellk~~~v~~v~~VEID~~Vv~~a~~~~~~~~~~~~dprv~i~i~-Da~~~l~~-~~~~  179 (312)
T d2b2ca1         104 HPDPKRVLIIGG--GDGGILREVLKHESVEKVTMCEIDEMVIDVAKKFLPGMSCGFSHPKLDLFCG-DGFEFLKN-HKNE  179 (312)
T ss_dssp             SSSCCEEEEESC--TTSHHHHHHTTCTTCCEEEEECSCHHHHHHHHHHCTTTSGGGGCTTEEEECS-CHHHHHHH-CTTC
T ss_pred             CCCCCeEEEeCC--CchHHHHHHHHcCCcceEEEEcccHHHHHHHHhhchhhccccCCCCeEEEEc-hHHHHHHh-CCCC
Confidence            355678999995  446666778887775 8999999988888887333210 011     11112 45556654 4457


Q ss_pred             ccEEEeCC----C-------chhHHHHHHhhccCCEEEEEec
Q 028523           89 INIYFENV----G-------GKMLDAVLLNMRIQGRITLCGM  119 (208)
Q Consensus        89 ~d~v~d~~----g-------~~~~~~~~~~l~~~G~~v~~g~  119 (208)
                      +|+||--.    +       .+.+..+.++|+++|.++.-+.
T Consensus       180 yDvII~D~~dp~~~~~~L~t~eFy~~~~~~L~~~Gi~v~q~~  221 (312)
T d2b2ca1         180 FDVIITDSSDPVGPAESLFGQSYYELLRDALKEDGILSSQGE  221 (312)
T ss_dssp             EEEEEECCC-------------HHHHHHHHEEEEEEEEEECC
T ss_pred             CCEEEEcCCCCCCcchhhhhHHHHHHHHhhcCCCcEEEEecC
Confidence            99997422    1       1136788889999999987654

>d2ex4a1 c.66.1.42 (A:2-224) Adrenal gland protein AD-003 (C9orf32) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: AD-003 protein-like
domain: Adrenal gland protein AD-003 (C9orf32)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.47  E-value=0.012  Score=40.30  Aligned_cols=100  Identities=14%  Similarity=0.093  Sum_probs=64.3

Q ss_pred             CCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCC--eeEecCCCccHHHHHHhHCCCCccEE
Q 028523           15 SPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFD--EAFNYKEEPDLDAALKRYFPEGINIY   92 (208)
Q Consensus        15 ~~~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~--~v~~~~~~~~~~~~~~~~~~~~~d~v   92 (208)
                      ...++.+||=.|+  |.|..+..+++..+.+|++++.|++-.+.+++.+...  ..+.+... ++.+ + ....+.+|+|
T Consensus        57 ~~~~~~~vLDiGc--G~G~~~~~l~~~~~~~v~~vD~s~~~l~~ak~~~~~~~~~~~~f~~~-d~~~-~-~~~~~~fD~I  131 (222)
T d2ex4a1          57 NKTGTSCALDCGA--GIGRITKRLLLPLFREVDMVDITEDFLVQAKTYLGEEGKRVRNYFCC-GLQD-F-TPEPDSYDVI  131 (222)
T ss_dssp             -CCCCSEEEEETC--TTTHHHHHTTTTTCSEEEEEESCHHHHHHHHHHTGGGGGGEEEEEEC-CGGG-C-CCCSSCEEEE
T ss_pred             CCCCCCEEEEecc--CCCHhhHHHHHhcCCEEEEeecCHHHhhccccccccccccccccccc-cccc-c-cccccccccc
Confidence            4567788998884  6688888887776779999999999888887443221  11122111 2211 0 1112379999


Q ss_pred             EeCC-----Cc----hhHHHHHHhhccCCEEEEEec
Q 028523           93 FENV-----GG----KMLDAVLLNMRIQGRITLCGM  119 (208)
Q Consensus        93 ~d~~-----g~----~~~~~~~~~l~~~G~~v~~g~  119 (208)
                      +...     ..    ..+..+.+.|+|+|.++....
T Consensus       132 ~~~~~l~h~~~~~~~~~l~~i~~~Lk~~G~~~i~~~  167 (222)
T d2ex4a1         132 WIQWVIGHLTDQHLAEFLRRCKGSLRPNGIIVIKDN  167 (222)
T ss_dssp             EEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred             ccccccccchhhhhhhHHHHHHHhcCCcceEEEEEc
Confidence            8732     21    257788899999999987644

>d2voua1 c.3.1.2 (A:2-163,A:292-394) Dihydroxypyridine hydroxylase DhpH {Arthrobacter nicotinovorans [TaxId: 29320]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Dihydroxypyridine hydroxylase DhpH
species: Arthrobacter nicotinovorans [TaxId: 29320]

Probab=95.44  E-value=0.011  Score=41.26  Aligned_cols=35  Identities=14%  Similarity=0.042  Sum_probs=30.7

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCH
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSK   53 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~   53 (208)
                      ..++|+|.|| |+.|++++..++..|.+|++..+++
T Consensus         3 ~~~kV~IiGa-G~aGl~~A~~L~~~G~~v~v~Er~~   37 (265)
T d2voua1           3 TTDRIAVVGG-SISGLTAALMLRDAGVDVDVYERSP   37 (265)
T ss_dssp             CCSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             CCCcEEEECc-CHHHHHHHHHHHHCCCCEEEEeCCC
Confidence            4678999997 9999999999988999999998653

>d1gtea4 c.4.1.1 (A:184-287,A:441-532) Dihydropyrimidine dehydrogenase, domain 2 {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Dihydropyrimidine dehydrogenase, domain 2
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=95.43  E-value=0.0075  Score=40.13  Aligned_cols=35  Identities=11%  Similarity=0.073  Sum_probs=30.5

Q ss_pred             CCEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCHH
Q 028523           19 GEYVFVSAASGAVGQLVGQFAKLVGC-YVVGSAGSKD   54 (208)
Q Consensus        19 g~~vli~ga~g~vG~~a~qla~~~g~-~v~~~~~s~~   54 (208)
                      +++|+|.|| |+.|+.++..++..|+ .|.+..+++.
T Consensus         4 ~~kVaIIGa-GpaGl~aA~~l~~~G~~~V~v~E~~~~   39 (196)
T d1gtea4           4 SAKIALLGA-GPASISCASFLARLGYSDITIFEKQEY   39 (196)
T ss_dssp             GCCEEEECC-SHHHHHHHHHHHHTTCCCEEEEESSSS
T ss_pred             CCEEEEECC-hHHHHHHHHHHHHCCCCeEEEEEecCc
Confidence            578999996 9999999999999999 5888887754

>d1oria_ c.66.1.6 (A:) Protein arginine N-methyltransferase 1, PRMT1 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arginine methyltransferase
domain: Protein arginine N-methyltransferase 1, PRMT1
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=95.42  E-value=0.011  Score=43.00  Aligned_cols=91  Identities=22%  Similarity=0.165  Sum_probs=50.5

Q ss_pred             CCCCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHH---hcCCCe---eEecCCCccHHHHHHhHCCC
Q 028523           15 SPKQGEYVFVSAASGAVGQLVGQFAKLVGC-YVVGSAGSKDKVDLLKN---KFGFDE---AFNYKEEPDLDAALKRYFPE   87 (208)
Q Consensus        15 ~~~~g~~vli~ga~g~vG~~a~qla~~~g~-~v~~~~~s~~~~~~~~~---~~g~~~---v~~~~~~~~~~~~~~~~~~~   87 (208)
                      .+.+|++||-.|+  |.|..++.+++ .|+ +|++++.++. ...+++   .-+...   ++..... ++     ....+
T Consensus        30 ~~~~~~~VLDiGc--G~G~ls~~aa~-~Ga~~V~avd~s~~-~~~a~~~~~~n~~~~~v~~~~~~~~-~~-----~~~~~   99 (316)
T d1oria_          30 HLFKDKVVLDVGS--GTGILCMFAAK-AGARKVIGIECSSI-SDYAVKIVKANKLDHVVTIIKGKVE-EV-----ELPVE   99 (316)
T ss_dssp             HHHTTCEEEEETC--TTSHHHHHHHH-TTCSEEEEEECSTT-HHHHHHHHHHTTCTTTEEEEESCTT-TC-----CCSSS
T ss_pred             ccCCcCEEEEEec--CCcHHHHHHHH-hCCCEEEEEcCcHH-HhhhhhHHHHhCCccccceEeccHH-Hc-----ccccc
Confidence            4568999999984  34666665555 676 8999997754 333321   233322   2222111 11     01122


Q ss_pred             CccEEEeC-CC----c-h----hHHHHHHhhccCCEEE
Q 028523           88 GINIYFEN-VG----G-K----MLDAVLLNMRIQGRIT  115 (208)
Q Consensus        88 ~~d~v~d~-~g----~-~----~~~~~~~~l~~~G~~v  115 (208)
                      .+|+|+.- .+    . .    .+...-+.|+|+|.++
T Consensus       100 ~~D~ivs~~~~~~l~~e~~~~~~l~~~~r~Lkp~G~ii  137 (316)
T d1oria_         100 KVDIIISEWMGYCLFYESMLNTVLHARDKWLAPDGLIF  137 (316)
T ss_dssp             CEEEEEECCCBBTBTBTCCHHHHHHHHHHHEEEEEEEE
T ss_pred             eeEEEeeeeeeeeeccHHHHHHHHHHHHhcCCCCeEEE
Confidence            68998652 22    1 1    2344557999999875

>d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Phenylcoumaran benzylic ether reductase
species: Loblolly pine (Pinus taeda) [TaxId: 3352]

Probab=95.42  E-value=0.006  Score=43.32  Aligned_cols=35  Identities=14%  Similarity=0.161  Sum_probs=31.3

Q ss_pred             CEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHH
Q 028523           20 EYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKD   54 (208)
Q Consensus        20 ~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~   54 (208)
                      .+|||+||+|-+|..++..+...|.+|++.+|+..
T Consensus         4 kKILVtGatG~iG~~l~~~L~~~G~~V~~l~R~~~   38 (307)
T d1qyca_           4 SRILLIGATGYIGRHVAKASLDLGHPTFLLVREST   38 (307)
T ss_dssp             CCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCC
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCeEEEEECCCc
Confidence            57999999999999999999888999999997644

>d1euca1 c.2.1.8 (A:1-130) Succinyl-CoA synthetase, alpha-chain, N-terminal (CoA-binding) domain {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Succinyl-CoA synthetase, alpha-chain, N-terminal (CoA-binding) domain
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=95.42  E-value=0.13  Score=31.52  Aligned_cols=38  Identities=21%  Similarity=0.228  Sum_probs=33.7

Q ss_pred             CCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCC
Q 028523           15 SPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGS   52 (208)
Q Consensus        15 ~~~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s   52 (208)
                      -+.++.+|+|.|-+|.-|....+.++.+|-++++-+..
T Consensus        11 li~k~TrVivQGiTG~~G~~ht~~m~~YGT~iVaGVtP   48 (130)
T d1euca1          11 YVDKNTKVICQGFTGKQGTFHSQQALEYGTNLVGGTTP   48 (130)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHHTCEEEEEECT
T ss_pred             EEcCCCeEEEEcCCCcHHHHHHHHHHHhcCCeEEeecc
Confidence            36788899999999999999999999999999988733

>d1jqea_ c.66.1.19 (A:) Histamine methyltransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Histamine methyltransferase
domain: Histamine methyltransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.38  E-value=0.062  Score=37.86  Aligned_cols=102  Identities=10%  Similarity=0.017  Sum_probs=60.4

Q ss_pred             CCCCCCEEEEecCCchHHHHHHHHHHHc-----C--CEEEEEeCCHHHHHHHHHhcCC----C-eeEecCCCccHHHHHH
Q 028523           15 SPKQGEYVFVSAASGAVGQLVGQFAKLV-----G--CYVVGSAGSKDKVDLLKNKFGF----D-EAFNYKEEPDLDAALK   82 (208)
Q Consensus        15 ~~~~g~~vli~ga~g~vG~~a~qla~~~-----g--~~v~~~~~s~~~~~~~~~~~g~----~-~v~~~~~~~~~~~~~~   82 (208)
                      ..+++-+||=.|+  |.|.....+++.+     +  .++++++.|+.-.+.+++.+.-    . ..++.... +..+...
T Consensus        37 ~~~~~~~VLDiGc--G~G~~~~~ll~~l~~~~~~~~~~~~~vD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~-~~~~~~~  113 (280)
T d1jqea_          37 DTKSEIKILSIGG--GAGEIDLQILSKVQAQYPGVCINNEVVEPSAEQIAKYKELVAKISNLENVKFAWHKE-TSSEYQS  113 (280)
T ss_dssp             TTCSEEEEEEETC--TTSHHHHHHHHHHHHHSTTCEEEEEEECCCHHHHHHHHHHHTTCCSCTTEEEEEECS-CHHHHHH
T ss_pred             cCCCCCeEEEEcC--CCCHHHHHHHHHhhhhccCCceEEEEEeCcHHHHHHHHHHHhhccccccccccchhh-hhhhhcc
Confidence            3344457888884  4455555554432     2  3678999998888877744321    1 12333333 3332222


Q ss_pred             ---hHC-CCCccEEEeCCC-------chhHHHHHHhhccCCEEEEEec
Q 028523           83 ---RYF-PEGINIYFENVG-------GKMLDAVLLNMRIQGRITLCGM  119 (208)
Q Consensus        83 ---~~~-~~~~d~v~d~~g-------~~~~~~~~~~l~~~G~~v~~g~  119 (208)
                         ... ++.||+|+-.-.       ...+..+.++|+|||.++....
T Consensus       114 ~~~~~~~~~~fD~I~~~~~l~~~~d~~~~l~~l~~~LkpgG~l~i~~~  161 (280)
T d1jqea_         114 RMLEKKELQKWDFIHMIQMLYYVKDIPATLKFFHSLLGTNAKMLIIVV  161 (280)
T ss_dssp             HHTTSSSCCCEEEEEEESCGGGCSCHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred             hhcccCCCCceeEEEEccceecCCCHHHHHHHHHhhCCCCCEEEEEEe
Confidence               122 237999976332       2368899999999998877643

>d1ps9a3 c.4.1.1 (A:331-465,A:628-671) 2,4-dienoyl-CoA reductase, middle domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: 2,4-dienoyl-CoA reductase, middle domain
species: Escherichia coli [TaxId: 562]

Probab=95.33  E-value=0.014  Score=38.61  Aligned_cols=36  Identities=22%  Similarity=0.091  Sum_probs=32.4

Q ss_pred             CCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCH
Q 028523           17 KQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSK   53 (208)
Q Consensus        17 ~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~   53 (208)
                      ..+.+|+|.|| |+.|+.++..+...|.+|++....+
T Consensus        41 ~~~k~V~IIGa-GPAGL~AA~~la~~G~~Vtl~E~~~   76 (179)
T d1ps9a3          41 VQKKNLAVVGA-GPAGLAFAINAAARGHQVTLFDAHS   76 (179)
T ss_dssp             SSCCEEEEECC-SHHHHHHHHHHHTTTCEEEEEESSS
T ss_pred             CCCcEEEEECc-cHHHHHHHHHHHhhccceEEEeccC
Confidence            45789999996 9999999999999999999999764

>d2o07a1 c.66.1.17 (A:16-300) Spermidine synthase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Spermidine synthase
domain: Spermidine synthase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.32  E-value=0.082  Score=37.54  Aligned_cols=98  Identities=12%  Similarity=0.100  Sum_probs=63.6

Q ss_pred             CCCCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHhcC----C---C--eeEecCCCccHHHHHHhH
Q 028523           15 SPKQGEYVFVSAASGAVGQLVGQFAKLVGC-YVVGSAGSKDKVDLLKNKFG----F---D--EAFNYKEEPDLDAALKRY   84 (208)
Q Consensus        15 ~~~~g~~vli~ga~g~vG~~a~qla~~~g~-~v~~~~~s~~~~~~~~~~~g----~---~--~v~~~~~~~~~~~~~~~~   84 (208)
                      .....++|||.|+  |-|..+-.++++.+. +|.++...++=.+.+++-+.    .   +  .++ .  . +..+.+++ 
T Consensus        75 ~~~~pk~vLiiGg--G~G~~~~~~l~~~~~~~v~~vEiD~~Vv~~a~~~~~~~~~~~~d~rv~i~-~--~-Da~~~l~~-  147 (285)
T d2o07a1          75 SHPNPRKVLIIGG--GDGGVLREVVKHPSVESVVQCEIDEDVIQVSKKFLPGMAIGYSSSKLTLH-V--G-DGFEFMKQ-  147 (285)
T ss_dssp             TSSSCCEEEEEEC--TTSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEE-E--S-CHHHHHHT-
T ss_pred             hCcCcCeEEEeCC--CchHHHHHHHHcCCcceeeeccCCHHHHHHHHhhchhhccccCCCCceEE-E--c-cHHHHHhc-
Confidence            4456689999995  446667777787665 99999989887777763221    1   1  122 1  2 44555554 


Q ss_pred             CCCCccEEEe-CCCc----------hhHHHHHHhhccCCEEEEEec
Q 028523           85 FPEGINIYFE-NVGG----------KMLDAVLLNMRIQGRITLCGM  119 (208)
Q Consensus        85 ~~~~~d~v~d-~~g~----------~~~~~~~~~l~~~G~~v~~g~  119 (208)
                      +.+.+|+||- ....          +.++.+.++|+++|.++.-..
T Consensus       148 ~~~~yDvIi~D~~~p~~~~~~L~t~eF~~~~~~~L~~~Gi~v~q~~  193 (285)
T d2o07a1         148 NQDAFDVIITDSSDPMGPAESLFKESYYQLMKTALKEDGVLCCQGE  193 (285)
T ss_dssp             CSSCEEEEEEECC-----------CHHHHHHHHHEEEEEEEEEEEE
T ss_pred             CCCCCCEEEEcCCCCCCcccccccHHHHHHHHHhcCCCCeEEEecc
Confidence            3347998864 3221          147788889999999887544

>d1uira_ c.66.1.17 (A:) Spermidine synthase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Spermidine synthase
domain: Spermidine synthase
species: Thermus thermophilus [TaxId: 274]

Probab=95.31  E-value=0.038  Score=39.89  Aligned_cols=96  Identities=17%  Similarity=0.160  Sum_probs=63.5

Q ss_pred             CCCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHhc-----CC---C--eeEecCCCccHHHHHHhH
Q 028523           16 PKQGEYVFVSAASGAVGQLVGQFAKLVGC-YVVGSAGSKDKVDLLKNKF-----GF---D--EAFNYKEEPDLDAALKRY   84 (208)
Q Consensus        16 ~~~g~~vli~ga~g~vG~~a~qla~~~g~-~v~~~~~s~~~~~~~~~~~-----g~---~--~v~~~~~~~~~~~~~~~~   84 (208)
                      -+..++|||.|+  |.|..+-.++++... +|.++..+++-.+.+++.+     +.   +  .++ .  . +..+.+++ 
T Consensus        75 ~~~pk~VLiiG~--G~G~~~~~ll~~~~~~~v~~VEiD~~Vi~~a~~~f~~~~~~~~~d~rv~i~-~--~-Da~~~l~~-  147 (312)
T d1uira_          75 HPEPKRVLIVGG--GEGATLREVLKHPTVEKAVMVDIDGELVEVAKRHMPEWHQGAFDDPRAVLV-I--D-DARAYLER-  147 (312)
T ss_dssp             SSCCCEEEEEEC--TTSHHHHHHTTSTTCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEE-E--S-CHHHHHHH-
T ss_pred             CCCcceEEEeCC--CchHHHHHHHhcCCcceEEEecCCHHHHHHHHhcCcccccCccCCCceEEE-E--c-hHHHHhhh-
Confidence            355689999995  446667777777654 9999999988777777433     11   1  122 1  2 55666654 


Q ss_pred             CCCCccEEEe-C---CCc----------hhHHHHHHhhccCCEEEEEe
Q 028523           85 FPEGINIYFE-N---VGG----------KMLDAVLLNMRIQGRITLCG  118 (208)
Q Consensus        85 ~~~~~d~v~d-~---~g~----------~~~~~~~~~l~~~G~~v~~g  118 (208)
                      +++.+|+||- .   .+.          +.+..+.++|+++|.++.-.
T Consensus       148 ~~~~yDvIi~D~~dp~~~~~~~~~L~t~eF~~~~~~~L~p~Gvlv~~~  195 (312)
T d1uira_         148 TEERYDVVIIDLTDPVGEDNPARLLYTVEFYRLVKAHLNPGGVMGMQT  195 (312)
T ss_dssp             CCCCEEEEEEECCCCBSTTCGGGGGSSHHHHHHHHHTEEEEEEEEEEE
T ss_pred             cCCcccEEEEeCCCcccccchhhhhhhHHHHHHHHHhcCCCceEEEec
Confidence            4457999863 3   121          13678889999999987644

>d1mjfa_ c.66.1.17 (A:) Putative spermidine synthetase PF0127 (SpeE) {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Spermidine synthase
domain: Putative spermidine synthetase PF0127 (SpeE)
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=95.29  E-value=0.049  Score=38.58  Aligned_cols=99  Identities=13%  Similarity=0.040  Sum_probs=61.2

Q ss_pred             CCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCC------------CeeEecCCCccHHHHHHh
Q 028523           16 PKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGF------------DEAFNYKEEPDLDAALKR   83 (208)
Q Consensus        16 ~~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~------------~~v~~~~~~~~~~~~~~~   83 (208)
                      ....++|||.|+  |.|..+-.++++-..+|.++..+++=.+.+++-++.            +.-+..... +....+++
T Consensus        70 ~~~p~~vLiiG~--G~G~~~~~~l~~~~~~v~~VEiD~~Vi~~a~~~f~~~~~~~~~~~~~~d~rv~i~~~-Da~~~l~~  146 (276)
T d1mjfa_          70 HPKPKRVLVIGG--GDGGTVREVLQHDVDEVIMVEIDEDVIMVSKDLIKIDNGLLEAMLNGKHEKAKLTIG-DGFEFIKN  146 (276)
T ss_dssp             SSCCCEEEEEEC--TTSHHHHHHTTSCCSEEEEEESCHHHHHHHHHHTCTTTTHHHHHHTTCCSSEEEEES-CHHHHHHH
T ss_pred             CCCCceEEEecC--CchHHHHHHHHhCCceEEEecCCHHHHHHHHHhhhhccchhhhhhccCCCCceEEEC-hHHHHHhc
Confidence            456689999995  335555556665445899999888877777743322            110111112 44455543


Q ss_pred             HCCCCccEEEe-CCCc----------hhHHHHHHhhccCCEEEEEec
Q 028523           84 YFPEGINIYFE-NVGG----------KMLDAVLLNMRIQGRITLCGM  119 (208)
Q Consensus        84 ~~~~~~d~v~d-~~g~----------~~~~~~~~~l~~~G~~v~~g~  119 (208)
                        .+++|+||. ...+          +.+..+.++|+++|.++.-+.
T Consensus       147 --~~~yDvIi~D~~~~~~~~~~L~t~eF~~~~~~~L~~~Gv~v~q~~  191 (276)
T d1mjfa_         147 --NRGFDVIIADSTDPVGPAKVLFSEEFYRYVYDALNNPGIYVTQAG  191 (276)
T ss_dssp             --CCCEEEEEEECCCCC-----TTSHHHHHHHHHHEEEEEEEEEEEE
T ss_pred             --cCCCCEEEEeCCCCCCCcccccCHHHHHhhHhhcCCCceEEEecC
Confidence              347999864 3321          247789999999999876543

>d1t4ba1 c.2.1.3 (A:1-133,A:355-367) Aspartate beta-semialdehyde dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Aspartate beta-semialdehyde dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=95.20  E-value=0.014  Score=37.25  Aligned_cols=88  Identities=22%  Similarity=0.136  Sum_probs=47.9

Q ss_pred             EEEEecCCchHHHHHHHH-HHHc---CCEEEEEeCCHHHHHHHHHhcCCC--eeEecCCCccHHHHHHhHCCCCccEEEe
Q 028523           21 YVFVSAASGAVGQLVGQF-AKLV---GCYVVGSAGSKDKVDLLKNKFGFD--EAFNYKEEPDLDAALKRYFPEGINIYFE   94 (208)
Q Consensus        21 ~vli~ga~g~vG~~a~ql-a~~~---g~~v~~~~~s~~~~~~~~~~~g~~--~v~~~~~~~~~~~~~~~~~~~~~d~v~d   94 (208)
                      +|.|.||||-+|+-.+|+ +.+.   -.+++...++...-....  ++..  .+.+..   +.. .+.     ++|++|-
T Consensus         3 kVaIvGATG~VGqeli~~Ll~~~~~p~~~l~~~~ss~s~g~~~~--~~~~~~~~~~~~---~~~-~~~-----~~DivF~   71 (146)
T d1t4ba1           3 NVGFIGWRGMVGSVLMQRMVEERDFDAIRPVFFSTSQLGQAAPS--FGGTTGTLQDAF---DLE-ALK-----ALDIIVT   71 (146)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHTTGGGGSEEEEEESSSTTSBCCG--GGTCCCBCEETT---CHH-HHH-----TCSEEEE
T ss_pred             EEEEECCccHHHHHHHHHHHhCCCCCeeEEEEeecccccccccc--ccCCceeeeccc---chh-hhh-----cCcEEEE
Confidence            688999999999999985 4432   236666664432211111  1111  122221   111 111     5999999


Q ss_pred             CCCchhHHHHHHhhccCC---EEEEEec
Q 028523           95 NVGGKMLDAVLLNMRIQG---RITLCGM  119 (208)
Q Consensus        95 ~~g~~~~~~~~~~l~~~G---~~v~~g~  119 (208)
                      |++.+........+...|   .++..+.
T Consensus        72 a~~~~~s~~~~~~~~~~g~~~~VID~Ss   99 (146)
T d1t4ba1          72 CQGGDYTNEIYPKLRESGWQGYWIDAAS   99 (146)
T ss_dssp             CSCHHHHHHHHHHHHHTTCCCEEEECSS
T ss_pred             ecCchHHHHhhHHHHhcCCCeecccCCc
Confidence            999765555455454444   3554433

>d1j6ua1 c.5.1.1 (A:0-88) UDP-N-acetylmuramate-alanine ligase MurC {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramate-alanine ligase MurC
species: Thermotoga maritima [TaxId: 2336]

Probab=95.19  E-value=0.12  Score=29.65  Aligned_cols=65  Identities=14%  Similarity=0.166  Sum_probs=44.4

Q ss_pred             EEEEecCCchHHHHH-HHHHHHcCCEEEEEeCCHH-HHHHHHHhcCCCeeEecCCCccHHHHHHhHCCCCccEEEeCCC
Q 028523           21 YVFVSAASGAVGQLV-GQFAKLVGCYVVGSAGSKD-KVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVG   97 (208)
Q Consensus        21 ~vli~ga~g~vG~~a-~qla~~~g~~v~~~~~s~~-~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~d~v~d~~g   97 (208)
                      +|-+.|- |++|..+ +++++..|+.|.+.+..+. ..+.++ +.|.......... ++         .+.|+|+-+.+
T Consensus         3 ~ihfiGI-gG~GMs~LA~~L~~~G~~VsGSD~~~~~~t~~L~-~~Gi~i~~gh~~~-~i---------~~~d~vV~SsA   69 (89)
T d1j6ua1           3 KIHFVGI-GGIGMSAVALHEFSNGNDVYGSNIEETERTAYLR-KLGIPIFVPHSAD-NW---------YDPDLVIKTPA   69 (89)
T ss_dssp             EEEEETT-TSHHHHHHHHHHHHTTCEEEEECSSCCHHHHHHH-HTTCCEESSCCTT-SC---------CCCSEEEECTT
T ss_pred             EEEEEeE-CHHHHHHHHHHHHhCCCeEEEEeCCCChhHHHHH-HCCCeEEeeeccc-cc---------CCCCEEEEecC
Confidence            5777784 8889765 6888999999999997763 455666 8897543322221 22         14788887665

>d2pgda2 c.2.1.6 (A:1-176) 6-phosphogluconate dehydrogenase {Sheep (Ovis orientalis aries) [TaxId: 9940]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Sheep (Ovis orientalis aries) [TaxId: 9940]

Probab=95.17  E-value=0.13  Score=33.48  Aligned_cols=40  Identities=18%  Similarity=0.032  Sum_probs=34.7

Q ss_pred             CEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH
Q 028523           20 EYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLK   60 (208)
Q Consensus        20 ~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~   60 (208)
                      .+|-+.| .|.+|...+.-+...|.+|++.++++++.+.+.
T Consensus         3 ~nIg~IG-lG~MG~~mA~~L~~~G~~V~v~dr~~~~~~~l~   42 (176)
T d2pgda2           3 ADIALIG-LAVMGQNLILNMNDHGFVVCAFNRTVSKVDDFL   42 (176)
T ss_dssp             BSEEEEC-CSHHHHHHHHHHHHTTCCEEEECSSTHHHHHHH
T ss_pred             CcEEEEe-EhHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHH
Confidence            3578889 599999888888788999999999999988877

>d2dula1 c.66.1.58 (A:3-377) N(2),N(2)-dimethylguanosine tRNA methyltransferase Trm1 {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: TRM1-like
domain: N(2),N(2)-dimethylguanosine tRNA methyltransferase Trm1
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=95.16  E-value=0.11  Score=38.35  Aligned_cols=93  Identities=18%  Similarity=0.143  Sum_probs=62.4

Q ss_pred             ecCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHhc---CCCe--------------eEecCCCccHHHHHHhHCC
Q 028523           25 SAASGAVGQLVGQFAKLVGC-YVVGSAGSKDKVDLLKNKF---GFDE--------------AFNYKEEPDLDAALKRYFP   86 (208)
Q Consensus        25 ~ga~g~vG~~a~qla~~~g~-~v~~~~~s~~~~~~~~~~~---g~~~--------------v~~~~~~~~~~~~~~~~~~   86 (208)
                      .-+-+++|...++.++..|+ +|++.+.+++..+.+++.+   +...              .+..... +....+. ...
T Consensus        50 LD~~sasG~rsiRya~E~~~~~V~~nDis~~A~~~i~~N~~lN~~~~~~~~~~~~~~~~~~~~~~~~~-Da~~~~~-~~~  127 (375)
T d2dula1          50 LDALSATGIRGIRFALETPAEEVWLNDISEDAYELMKRNVMLNFDGELRESKGRAILKGEKTIVINHD-DANRLMA-ERH  127 (375)
T ss_dssp             EESSCTTSHHHHHHHHHSSCSEEEEEESCHHHHHHHHHHHHHHCCSCCEECSSEEEEESSSEEEEEES-CHHHHHH-HST
T ss_pred             EEcCCCccHHHHHHHHhCCCCEEEEecCCHHHHHHHHHHHHhcCccccccccccccccccceeEeehh-hhhhhhH-hhc
Confidence            34457789999999998888 8999999999888887532   1111              0111111 3332222 223


Q ss_pred             CCccEE-EeCCCc--hhHHHHHHhhccCCEEEEEec
Q 028523           87 EGINIY-FENVGG--KMLDAVLLNMRIQGRITLCGM  119 (208)
Q Consensus        87 ~~~d~v-~d~~g~--~~~~~~~~~l~~~G~~v~~g~  119 (208)
                      ..||+| +|..|+  +.++.+++.++.+|-+.....
T Consensus       128 ~~fDvIDiDPfGs~~pfldsAi~a~~~~Gll~vTaT  163 (375)
T d2dula1         128 RYFHFIDLDPFGSPMEFLDTALRSAKRRGILGVTAT  163 (375)
T ss_dssp             TCEEEEEECCSSCCHHHHHHHHHHEEEEEEEEEEEC
T ss_pred             CcCCcccCCCCCCcHHHHHHHHHHhccCCEEEEEec
Confidence            379966 888884  578999999999988776654

>d2b78a2 c.66.1.51 (A:69-385) Hypothetical protein SMu776, middle and C-terminal domains {Streptococcus mutans [TaxId: 1309]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Hypothetical protein SMu776, middle and C-terminal domains
species: Streptococcus mutans [TaxId: 1309]

Probab=95.16  E-value=0.082  Score=38.17  Aligned_cols=99  Identities=15%  Similarity=0.040  Sum_probs=60.9

Q ss_pred             cCCCCCCEEEEe-cCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHhc---CC--Ce--eEecCCCccHHHHHHhH
Q 028523           14 CSPKQGEYVFVS-AASGAVGQLVGQFAKLVGC-YVVGSAGSKDKVDLLKNKF---GF--DE--AFNYKEEPDLDAALKRY   84 (208)
Q Consensus        14 ~~~~~g~~vli~-ga~g~vG~~a~qla~~~g~-~v~~~~~s~~~~~~~~~~~---g~--~~--v~~~~~~~~~~~~~~~~   84 (208)
                      ..+.+|++||=. .++|+.+   +..+ ..|+ .|+.++.++...+.+++.+   |.  ..  ++.   . +..+.++..
T Consensus       140 ~~~~~g~~VLdlf~~~G~~s---l~aa-~~ga~~V~~vD~s~~a~~~a~~N~~~n~l~~~~~~~i~---~-d~~~~l~~~  211 (317)
T d2b78a2         140 NGSAAGKTVLNLFSYTAAFS---VAAA-MGGAMATTSVDLAKRSRALSLAHFEANHLDMANHQLVV---M-DVFDYFKYA  211 (317)
T ss_dssp             HTTTBTCEEEEETCTTTHHH---HHHH-HTTBSEEEEEESCTTHHHHHHHHHHHTTCCCTTEEEEE---S-CHHHHHHHH
T ss_pred             HHhhCCCceeecCCCCcHHH---HHHH-hCCCceEEEecCCHHHHHHHHHHHHHhcccCcceEEEE---c-cHHHHHHHH
Confidence            467789999844 4444444   3333 3577 8999999988877776432   22  21  222   2 444445443


Q ss_pred             C--CCCccEEEeCCC----c------------hhHHHHHHhhccCCEEEEEecc
Q 028523           85 F--PEGINIYFENVG----G------------KMLDAVLLNMRIQGRITLCGMI  120 (208)
Q Consensus        85 ~--~~~~d~v~d~~g----~------------~~~~~~~~~l~~~G~~v~~g~~  120 (208)
                      .  +..||+||---+    +            +.+..++++|+|||.++.+...
T Consensus       212 ~~~~~~fD~Ii~DPP~f~~~~~~~~~~~~~~~~L~~~a~~ll~pgG~l~~~scs  265 (317)
T d2b78a2         212 RRHHLTYDIIIIDPPSFARNKKEVFSVSKDYHKLIRQGLEILSENGLIIASTNA  265 (317)
T ss_dssp             HHTTCCEEEEEECCCCC-----CCCCHHHHHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred             HhhcCCCCEEEEcChhhccchhHHHHHHHHHHHHHHHHHHHcCCCCEEEEEeCC
Confidence            2  237999874211    0            1456788899999999887653

>d1y8ca_ c.66.1.43 (A:) Putative methyltransferase CAC2371 {Clostridium acetobutylicum [TaxId: 1488]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: CAC2371-like
domain: Putative methyltransferase CAC2371
species: Clostridium acetobutylicum [TaxId: 1488]

Probab=95.12  E-value=0.052  Score=37.42  Aligned_cols=90  Identities=13%  Similarity=0.093  Sum_probs=57.8

Q ss_pred             CCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHh---cCCCeeEecCCCccHHHHHHhHC-CCCccEE
Q 028523           17 KQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNK---FGFDEAFNYKEEPDLDAALKRYF-PEGINIY   92 (208)
Q Consensus        17 ~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~---~g~~~v~~~~~~~~~~~~~~~~~-~~~~d~v   92 (208)
                      .++++||=.|+  |.|..+..+++ .|.+|++++.|++-.+.+++.   .|...-+-.  . ++    .++. .+.||+|
T Consensus        36 ~~~~~vLDiGC--G~G~~~~~l~~-~g~~v~GvD~S~~ml~~A~~~~~~~~~~v~~~~--~-d~----~~~~~~~~fD~i  105 (246)
T d1y8ca_          36 LVFDDYLDLAC--GTGNLTENLCP-KFKNTWAVDLSQEMLSEAENKFRSQGLKPRLAC--Q-DI----SNLNINRKFDLI  105 (246)
T ss_dssp             CCTTEEEEETC--TTSTTHHHHGG-GSSEEEEECSCHHHHHHHHHHHHHTTCCCEEEC--C-CG----GGCCCSCCEEEE
T ss_pred             CCCCeEEEEeC--cCCHHHHHHHH-hCCccEeeccchhhhhhccccccccCccceeec--c-ch----hhhccccccccc
Confidence            45678998885  35666666665 478999999999987777643   233211111  1 22    1222 2379999


Q ss_pred             EeCCCc-----------hhHHHHHHhhccCCEEEE
Q 028523           93 FENVGG-----------KMLDAVLLNMRIQGRITL  116 (208)
Q Consensus        93 ~d~~g~-----------~~~~~~~~~l~~~G~~v~  116 (208)
                      +...+.           ..+..+.+.|+|||.++.
T Consensus       106 ~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~~i~  140 (246)
T d1y8ca_         106 TCCLDSTNYIIDSDDLKKYFKAVSNHLKEGGVFIF  140 (246)
T ss_dssp             EECTTGGGGCCSHHHHHHHHHHHHTTEEEEEEEEE
T ss_pred             ceeeeeeeccCCHHHHHHHHHHHHHhCCCCeEEEE
Confidence            864321           147788889999999875

>d1ri5a_ c.66.1.34 (A:) mRNA cap (Guanine N-7) methyltransferase {Fungus (Encephalitozoon cuniculi) [TaxId: 6035]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: mRNA cap (Guanine N-7) methyltransferase
domain: mRNA cap (Guanine N-7) methyltransferase
species: Fungus (Encephalitozoon cuniculi) [TaxId: 6035]

Probab=95.10  E-value=0.019  Score=40.04  Aligned_cols=97  Identities=8%  Similarity=0.065  Sum_probs=59.1

Q ss_pred             CCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHh---cCCCeeEecCCCccHHHHHHhH-CCCCccE
Q 028523           16 PKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNK---FGFDEAFNYKEEPDLDAALKRY-FPEGINI   91 (208)
Q Consensus        16 ~~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~---~g~~~v~~~~~~~~~~~~~~~~-~~~~~d~   91 (208)
                      ++++++||=.|.  |.|..+..+++.-..+|++++.|++..+.+++.   .+...-+..... +...  ... ..+.||+
T Consensus        22 ~~~~~~VLDlGC--G~G~~~~~~~~~~~~~v~GiD~S~~~l~~A~~r~~~~~~~~~v~f~~~-D~~~--~~~~~~~~fD~   96 (252)
T d1ri5a_          22 TKRGDSVLDLGC--GKGGDLLKYERAGIGEYYGVDIAEVSINDARVRARNMKRRFKVFFRAQ-DSYG--RHMDLGKEFDV   96 (252)
T ss_dssp             CCTTCEEEEETC--TTTTTHHHHHHHTCSEEEEEESCHHHHHHHHHHHHTSCCSSEEEEEES-CTTT--SCCCCSSCEEE
T ss_pred             CCCcCEEEEecc--cCcHHHHHHHHcCCCeEEEecCCHHHHHHHHHHHHhcCCCcceEEEEc-chhh--hcccccccceE
Confidence            578999998884  336666677665445899999999988887643   232211111111 1100  001 1226999


Q ss_pred             EEeCCCc-----------hhHHHHHHhhccCCEEEEE
Q 028523           92 YFENVGG-----------KMLDAVLLNMRIQGRITLC  117 (208)
Q Consensus        92 v~d~~g~-----------~~~~~~~~~l~~~G~~v~~  117 (208)
                      |+....-           ..+..+.+.|+|||.++..
T Consensus        97 V~~~~~l~~~~~~~~~~~~~l~~i~~~Lk~gG~~i~~  133 (252)
T d1ri5a_          97 ISSQFSFHYAFSTSESLDIAQRNIARHLRPGGYFIMT  133 (252)
T ss_dssp             EEEESCGGGGGSSHHHHHHHHHHHHHTEEEEEEEEEE
T ss_pred             EEEcceeeecCCCHHHHHHHHHHHhceeCCCCEEEEE
Confidence            9764331           1356677899999998764

>d1kyqa1 c.2.1.11 (A:1-150) Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Siroheme synthase N-terminal domain-like
domain: Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=95.03  E-value=0.015  Score=37.21  Aligned_cols=34  Identities=15%  Similarity=0.142  Sum_probs=29.9

Q ss_pred             CCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeC
Q 028523           17 KQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAG   51 (208)
Q Consensus        17 ~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~   51 (208)
                      -.|.+|||.|| |.+|..-+..+...|++|++++.
T Consensus        11 l~gkrvLViGg-G~va~~ka~~Ll~~GA~VtVvap   44 (150)
T d1kyqa1          11 LKDKRILLIGG-GEVGLTRLYKLMPTGCKLTLVSP   44 (150)
T ss_dssp             CTTCEEEEEEE-SHHHHHHHHHHGGGTCEEEEEEE
T ss_pred             eCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeC
Confidence            36899999997 99999999999999999888863

>d1f0ya2 c.2.1.6 (A:12-203) Short chain L-3-hydroxyacyl CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Short chain L-3-hydroxyacyl CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.01  E-value=0.037  Score=36.91  Aligned_cols=40  Identities=28%  Similarity=0.238  Sum_probs=34.7

Q ss_pred             CEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH
Q 028523           20 EYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLK   60 (208)
Q Consensus        20 ~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~   60 (208)
                      ++|.|.|+ |.+|...++++...|.+|+..+++++..+.+.
T Consensus         5 kkvaViGa-G~mG~~iA~~~a~~G~~V~l~D~~~~~l~~a~   44 (192)
T d1f0ya2           5 KHVTVIGG-GLMGAGIAQVAAATGHTVVLVDQTEDILAKSK   44 (192)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHH
T ss_pred             EEEEEECc-CHHHHHHHHHHHhCCCcEEEEECChHHHHHHH
Confidence            47899996 99999999999999999999999998765554

>d1gesa2 c.3.1.5 (A:147-262) Glutathione reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Escherichia coli [TaxId: 562]

Probab=95.00  E-value=0.026  Score=34.33  Aligned_cols=34  Identities=24%  Similarity=0.113  Sum_probs=30.6

Q ss_pred             CCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCH
Q 028523           19 GEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSK   53 (208)
Q Consensus        19 g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~   53 (208)
                      .++++|.|| |.+|+-+++.++.+|.+|.++.+++
T Consensus        21 p~~vvIiGg-G~ig~E~A~~l~~~G~~Vtlve~~~   54 (116)
T d1gesa2          21 PERVAVVGA-GYIGVELGGVINGLGAKTHLFEMFD   54 (116)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             CCEEEEECC-ChhhHHHHHHhhccccEEEEEeecc
Confidence            478999996 9999999999999999999998765

>d2g82a1 c.2.1.3 (A:1-148,A:311-330) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Thermus aquaticus [TaxId: 271]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Thermus aquaticus [TaxId: 271]

Probab=95.00  E-value=0.19  Score=32.50  Aligned_cols=94  Identities=15%  Similarity=0.073  Sum_probs=57.9

Q ss_pred             EEEEecCCchHHHHHHHHHHHcCCEEEEEeCC--HHHHHHHHHhcCCC-----eeEe---------------cCCCccHH
Q 028523           21 YVFVSAASGAVGQLVGQFAKLVGCYVVGSAGS--KDKVDLLKNKFGFD-----EAFN---------------YKEEPDLD   78 (208)
Q Consensus        21 ~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s--~~~~~~~~~~~g~~-----~v~~---------------~~~~~~~~   78 (208)
                      +|.|.| -|-+|..+.+.+...+.+++++-..  .+.+.++. ++...     ..+.               +++. +  
T Consensus         2 kigING-fGRIGR~~~R~l~~~~i~iv~INd~~~~~~~ayLl-~yDS~hG~~~~~v~~~~~~l~i~g~~I~~~~~~-~--   76 (168)
T d2g82a1           2 KVGING-FGRIGRQVFRILHSRGVEVALINDLTDNKTLAHLL-KYDSIYHRFPGEVAYDDQYLYVDGKAIRATAVK-D--   76 (168)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHHHTCCEEEEECSSCHHHHHHHH-HCCTTTCSCSSCEEECSSEEEETTEEEEEECCS-S--
T ss_pred             EEEEEC-CcHHHHHHHHHHhcCCCEEEEECCCcchhhhhhee-ecccccCccccccccccceeEecceeEEEEecC-C--
Confidence            478888 6999999999887778888776643  33444554 33211     0011               1111 1  


Q ss_pred             HHHHhHCCC--CccEEEeCCC-chhHHHHHHhhccCCEEEEEeccc
Q 028523           79 AALKRYFPE--GINIYFENVG-GKMLDAVLLNMRIQGRITLCGMIS  121 (208)
Q Consensus        79 ~~~~~~~~~--~~d~v~d~~g-~~~~~~~~~~l~~~G~~v~~g~~~  121 (208)
                        ..++-..  ++|+|+||+| ....+.+...+..|-+-|.+..+.
T Consensus        77 --p~~i~W~~~gvdiViEcTG~f~~~~~~~~hl~~gakkViiSAP~  120 (168)
T d2g82a1          77 --PKEIPWAEAGVGVVIESTGVFTDADKAKAHLEGGAKKVIITAPA  120 (168)
T ss_dssp             --GGGCCTGGGTEEEEEECSSSCCBHHHHTHHHHTTCSEEEESSCC
T ss_pred             --hHHCcccccCCceeEeccccccchHHhhhhhccccceeeecccc
Confidence              1122222  7999999999 567778888888776555555443

>d1v59a2 c.3.1.5 (A:161-282) Dihydrolipoamide dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=94.98  E-value=0.023  Score=34.93  Aligned_cols=35  Identities=14%  Similarity=0.126  Sum_probs=31.1

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCH
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSK   53 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~   53 (208)
                      ..++++|.|| |.+|+-+++.+..+|.+|.++.+++
T Consensus        22 ~p~~~vIiG~-G~ig~E~A~~l~~lG~~Vtii~~~~   56 (122)
T d1v59a2          22 IPKRLTIIGG-GIIGLEMGSVYSRLGSKVTVVEFQP   56 (122)
T ss_dssp             CCSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             CCCeEEEECC-CchHHHHHHHHHhhCcceeEEEecc
Confidence            3478999996 9999999999999999999998664

>d1iy9a_ c.66.1.17 (A:) Spermidine synthase {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Spermidine synthase
domain: Spermidine synthase
species: Bacillus subtilis [TaxId: 1423]

Probab=94.97  E-value=0.043  Score=38.81  Aligned_cols=97  Identities=10%  Similarity=0.061  Sum_probs=63.8

Q ss_pred             CCCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHhc----CC--C---eeEecCCCccHHHHHHhHC
Q 028523           16 PKQGEYVFVSAASGAVGQLVGQFAKLVGC-YVVGSAGSKDKVDLLKNKF----GF--D---EAFNYKEEPDLDAALKRYF   85 (208)
Q Consensus        16 ~~~g~~vli~ga~g~vG~~a~qla~~~g~-~v~~~~~s~~~~~~~~~~~----g~--~---~v~~~~~~~~~~~~~~~~~   85 (208)
                      ....++|||.|+  |-|..+-.++++.+. +|.++...++=.+.+++-+    ++  +   .++.   . +....+++ +
T Consensus        73 ~~~p~~vLiiGg--G~G~~~~~~l~~~~~~~i~~VEID~~Vi~~a~~~~~~~~~~~~d~r~~i~~---~-D~~~~l~~-~  145 (274)
T d1iy9a_          73 HPNPEHVLVVGG--GDGGVIREILKHPSVKKATLVDIDGKVIEYSKKFLPSIAGKLDDPRVDVQV---D-DGFMHIAK-S  145 (274)
T ss_dssp             SSSCCEEEEESC--TTCHHHHHHTTCTTCSEEEEEESCHHHHHHHHHHCHHHHTTTTSTTEEEEE---S-CSHHHHHT-C
T ss_pred             cCCcceEEecCC--CCcHHHHHHHhcCCcceEEEecCCHHHHHHHHHhChhhcccccCCCeEEEe---c-hHHHHHhh-c
Confidence            355689999985  446677778887765 9999999988777777322    22  1   1221   1 33444554 3


Q ss_pred             CCCccEEEe-CCC----------chhHHHHHHhhccCCEEEEEec
Q 028523           86 PEGINIYFE-NVG----------GKMLDAVLLNMRIQGRITLCGM  119 (208)
Q Consensus        86 ~~~~d~v~d-~~g----------~~~~~~~~~~l~~~G~~v~~g~  119 (208)
                      +..+|+|+- ...          .+.++.+.++|+++|.++.-..
T Consensus       146 ~~~yDvIi~D~~~p~~~~~~L~t~eFy~~~~~~L~~~Gv~v~q~~  190 (274)
T d1iy9a_         146 ENQYDVIMVDSTEPVGPAVNLFTKGFYAGIAKALKEDGIFVAQTD  190 (274)
T ss_dssp             CSCEEEEEESCSSCCSCCCCCSTTHHHHHHHHHEEEEEEEEEECC
T ss_pred             CCCCCEEEEcCCCCCCcchhhccHHHHHHHHhhcCCCceEEEecC
Confidence            347999963 222          1247889999999999987543

>d1dssg1 c.2.1.3 (G:1-148,G:313-334) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {South China Sea lobster (Palinurus versicolor) [TaxId: 150436]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: South China Sea lobster (Palinurus versicolor) [TaxId: 150436]

Probab=94.96  E-value=0.053  Score=35.30  Aligned_cols=94  Identities=16%  Similarity=0.200  Sum_probs=60.3

Q ss_pred             EEEEecCCchHHHHHHHHHHHcCCEEEEEeCC---HHHHHHHHHhc----CC-Ce---------eEe------cCCCccH
Q 028523           21 YVFVSAASGAVGQLVGQFAKLVGCYVVGSAGS---KDKVDLLKNKF----GF-DE---------AFN------YKEEPDL   77 (208)
Q Consensus        21 ~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s---~~~~~~~~~~~----g~-~~---------v~~------~~~~~~~   77 (208)
                      +|.|.| -|-+|+++.+.+...+.+++++-..   .+...++. ++    |. +.         +++      +++. +.
T Consensus         2 kIgING-fGRIGR~~~R~~~~~~~~ivaINd~~~~~~~~~yLl-kyDS~hG~~~~~i~~~~~~l~ing~~I~~~~~~-~p   78 (169)
T d1dssg1           2 KIGING-FGRIGRLVLRAALEMGAQVVAVNDPFIALEYMVYMF-KYDSTHGMFKGEVKAEDGALVVDGKKITVFNEM-KP   78 (169)
T ss_dssp             CEEEEC-CSHHHHHHHHHHHHHTCCEEEEECTTSCHHHHHHHH-HCCTTTCCCSSCEEEETTEEEETTEEEEEECCS-SG
T ss_pred             eEEEEC-CcHHHHHHHHHHHhCCCcEEEECCCCcCHHHHHHHH-hcccccCCcCCeEEEeCCEEEECCEEEEEEecC-Ch
Confidence            578888 6999999999888778888777642   34566665 33    21 00         110      0110 11


Q ss_pred             HHHHHhHCCC--CccEEEeCCC-chhHHHHHHhhccCCEEEEEeccc
Q 028523           78 DAALKRYFPE--GINIYFENVG-GKMLDAVLLNMRIQGRITLCGMIS  121 (208)
Q Consensus        78 ~~~~~~~~~~--~~d~v~d~~g-~~~~~~~~~~l~~~G~~v~~g~~~  121 (208)
                          .++-..  ++|+|+||+| ....+.+...+..|-+-|.+..+.
T Consensus        79 ----~~i~W~~~gvD~ViEcTG~f~~~~~~~~hl~~gakkViisaP~  121 (169)
T d1dssg1          79 ----ENIPWSKAGAEYIVESTGVFTTIEKASAHFKGGAKKVIISAPS  121 (169)
T ss_dssp             ----GGCCHHHHTCCEEEECSSSCCSHHHHGGGGTTTCSEEEESSCC
T ss_pred             ----HHCCccccCCCEEEecCceEcCHHHHHHHHhcCCceEeecCCc
Confidence                111111  7999999999 577788888898887767776544

>d1d7ya2 c.3.1.5 (A:116-236) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent ferredoxin reductase, BphA4
species: Pseudomonas sp., KKS102 [TaxId: 306]

Probab=94.94  E-value=0.032  Score=34.25  Aligned_cols=39  Identities=13%  Similarity=0.175  Sum_probs=34.0

Q ss_pred             CCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHH
Q 028523           15 SPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKD   54 (208)
Q Consensus        15 ~~~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~   54 (208)
                      .++++++++|.|| |.+|.-++..++..|.+|..+.+++.
T Consensus        26 ~~~~~~~vvIIGg-G~iG~E~A~~l~~~g~~Vtli~~~~~   64 (121)
T d1d7ya2          26 GLRPQSRLLIVGG-GVIGLELAATARTAGVHVSLVETQPR   64 (121)
T ss_dssp             HCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred             hhhcCCeEEEECc-chhHHHHHHHhhcccceEEEEeeccc
Confidence            3567899999996 99999999999999999999997753

>d1diha1 c.2.1.3 (A:2-130,A:241-273) Dihydrodipicolinate reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Escherichia coli [TaxId: 562]

Probab=94.90  E-value=0.0031  Score=41.21  Aligned_cols=92  Identities=17%  Similarity=0.151  Sum_probs=56.7

Q ss_pred             EEEEecCCchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHhcC----C--CeeEecCCCccHHHHHHhHCCCCccEEE
Q 028523           21 YVFVSAASGAVGQLVGQFAKLV-GCYVVGSAGSKDKVDLLKNKFG----F--DEAFNYKEEPDLDAALKRYFPEGINIYF   93 (208)
Q Consensus        21 ~vli~ga~g~vG~~a~qla~~~-g~~v~~~~~s~~~~~~~~~~~g----~--~~v~~~~~~~~~~~~~~~~~~~~~d~v~   93 (208)
                      +|.|+|++|-+|++.++++... +.+++....++.....-+ .+|    .  ..+....   +...     ....+|+++
T Consensus         6 kI~i~Ga~GrMG~~i~~~i~~~~~~~lv~~~~~~~~~~~g~-d~~~~~~~~~~~~~~~~---~~~~-----~~~~~DViI   76 (162)
T d1diha1           6 RVAIAGAGGRMGRQLIQAALALEGVQLGAALEREGSSLLGS-DAGELAGAGKTGVTVQS---SLDA-----VKDDFDVFI   76 (162)
T ss_dssp             EEEETTTTSHHHHHHHHHHHHSTTEECCCEECCTTCTTCSC-CTTCSSSSSCCSCCEES---CSTT-----TTTSCSEEE
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecccchhccc-hhhhhhccccCCceeec---cHHH-----HhcccceEE
Confidence            5899999999999999988765 667776664433211000 111    1  0110011   1100     112589999


Q ss_pred             eCCCchhHHHHHHhhccCCEEEEEeccc
Q 028523           94 ENVGGKMLDAVLLNMRIQGRITLCGMIS  121 (208)
Q Consensus        94 d~~g~~~~~~~~~~l~~~G~~v~~g~~~  121 (208)
                      |++..+.....++.....|.=+.+|.+.
T Consensus        77 DFs~p~~~~~~~~~a~~~~~~~ViGTTG  104 (162)
T d1diha1          77 DFTRPEGTLNHLAFCRQHGKGMVIGTTG  104 (162)
T ss_dssp             ECSCHHHHHHHHHHHHHTTCEEEECCCC
T ss_pred             EeccHHHHHHHHHHHHhccceeEEecCC
Confidence            9999888778888777777766777654

>d1dxla2 c.3.1.5 (A:153-275) Dihydrolipoamide dehydrogenase {Garden pea (Pisum sativum) [TaxId: 3888]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Garden pea (Pisum sativum) [TaxId: 3888]

Probab=94.87  E-value=0.021  Score=35.20  Aligned_cols=37  Identities=19%  Similarity=0.177  Sum_probs=32.4

Q ss_pred             CCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHH
Q 028523           17 KQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKD   54 (208)
Q Consensus        17 ~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~   54 (208)
                      +..++++|.|| |.+|+-+++....+|.+|.++.+++.
T Consensus        23 ~~p~~~viiG~-G~iglE~A~~~~~~G~~Vtvi~~~~~   59 (123)
T d1dxla2          23 EIPKKLVVIGA-GYIGLEMGSVWGRIGSEVTVVEFASE   59 (123)
T ss_dssp             SCCSEEEESCC-SHHHHHHHHHHHHHTCEEEEECSSSS
T ss_pred             ccCCeEEEEcc-chHHHHHHHHHHhcCCeEEEEEEccc
Confidence            34578999996 99999999999999999999987753

>d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.85  E-value=0.1  Score=37.81  Aligned_cols=31  Identities=23%  Similarity=0.150  Sum_probs=28.5

Q ss_pred             CEEEEecCCchHHHHHHHHHHHcCCEEEEEe
Q 028523           20 EYVFVSAASGAVGQLVGQFAKLVGCYVVGSA   50 (208)
Q Consensus        20 ~~vli~ga~g~vG~~a~qla~~~g~~v~~~~   50 (208)
                      ++|||+||+|-+|...+..+...|.+|++++
T Consensus         3 kKILITG~tGfIGs~lv~~Ll~~g~~V~~ld   33 (346)
T d1ek6a_           3 EKVLVTGGAGYIGSHTVLELLEAGYLPVVID   33 (346)
T ss_dssp             SEEEEETTTSHHHHHHHHHHHHTTCCEEEEE
T ss_pred             CeEEEECCCcHHHHHHHHHHHHCcCEEEEEE
Confidence            5899999999999999999888899999986

>d2i76a2 c.2.1.6 (A:2-154) Hypothetical protein TM1727 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hypothetical protein TM1727
species: Thermotoga maritima [TaxId: 2336]

Probab=94.84  E-value=0.017  Score=36.97  Aligned_cols=82  Identities=16%  Similarity=0.145  Sum_probs=50.6

Q ss_pred             EEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHHHHhHCCCCccEEEeCCCchhHH
Q 028523           23 FVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVGGKMLD  102 (208)
Q Consensus        23 li~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~~~  102 (208)
                      -+.| +|.+|...++.++..+.-+.+..|+.++.+.+.+.++.. ..+..+.           -...|+||-|+..+.+.
T Consensus         3 gfIG-~G~mg~~l~~~L~~~~~~~~v~~R~~~~~~~l~~~~~~~-~~~~~~~-----------~~~~DiVil~v~d~~i~   69 (153)
T d2i76a2           3 NFVG-TGTLTRFFLECLKDRYEIGYILSRSIDRARNLAEVYGGK-AATLEKH-----------PELNGVVFVIVPDRYIK   69 (153)
T ss_dssp             EEES-CCHHHHHHHHTTC----CCCEECSSHHHHHHHHHHTCCC-CCSSCCC-----------CC---CEEECSCTTTHH
T ss_pred             EEEe-CcHHHHHHHHHHHhCCCEEEEEeCChhhhcchhhccccc-ccchhhh-----------hccCcEEEEeccchhhh
Confidence            3567 599998887766543333457889999998888555532 2222211           11379999999988888


Q ss_pred             HHHHhhccCCE-EEEE
Q 028523          103 AVLLNMRIQGR-ITLC  117 (208)
Q Consensus       103 ~~~~~l~~~G~-~v~~  117 (208)
                      ..+..|+..+. ++.+
T Consensus        70 ~v~~~l~~~~~ivi~~   85 (153)
T d2i76a2          70 TVANHLNLGDAVLVHC   85 (153)
T ss_dssp             HHHTTTCCSSCCEEEC
T ss_pred             HHHhhhcccceeeeec
Confidence            88888875554 4444

>d2fcaa1 c.66.1.53 (A:10-213) tRNA (guanine-N(7)-)-methyltransferase TrmB {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: TrmB-like
domain: tRNA (guanine-N(7)-)-methyltransferase TrmB
species: Bacillus subtilis [TaxId: 1423]

Probab=94.82  E-value=0.31  Score=32.57  Aligned_cols=96  Identities=15%  Similarity=0.071  Sum_probs=60.6

Q ss_pred             CCEEEEecCCchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHH---hcCCCeeEecCCCccHHHHHHhHCCCCccEEEe
Q 028523           19 GEYVFVSAASGAVGQLVGQFAKLV-GCYVVGSAGSKDKVDLLKN---KFGFDEAFNYKEEPDLDAALKRYFPEGINIYFE   94 (208)
Q Consensus        19 g~~vli~ga~g~vG~~a~qla~~~-g~~v~~~~~s~~~~~~~~~---~~g~~~v~~~~~~~~~~~~~~~~~~~~~d~v~d   94 (208)
                      +..||=.|  .|.|..++.+|+.. ..++++++.++.....+.+   +.|.+.+--...  +.......+.++.+|.|+-
T Consensus        30 ~PlvLeIG--cG~G~~~~~lA~~~p~~~~iGiD~~~~~i~~a~~~~~~~~l~Nv~~~~~--Da~~l~~~~~~~~~d~v~i  105 (204)
T d2fcaa1          30 NPIHIEVG--TGKGQFISGMAKQNPDINYIGIELFKSVIVTAVQKVKDSEAQNVKLLNI--DADTLTDVFEPGEVKRVYL  105 (204)
T ss_dssp             CCEEEEEC--CTTSHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHSCCSSEEEECC--CGGGHHHHCCTTSCCEEEE
T ss_pred             CceEEEEE--ecCcHHHHHHHHhCCCCcEEEeecchHHHHHHHHHHHHHhccCchhccc--chhhhhcccCchhhhcccc
Confidence            34566666  56788899999876 6799999999887665532   456653321221  2222222223336887765


Q ss_pred             CCCc---------------hhHHHHHHhhccCCEEEEEe
Q 028523           95 NVGG---------------KMLDAVLLNMRIQGRITLCG  118 (208)
Q Consensus        95 ~~g~---------------~~~~~~~~~l~~~G~~v~~g  118 (208)
                      ....               +.+..+.+.|+|||.+....
T Consensus       106 ~fp~P~~k~~h~k~Rl~~~~~l~~~~r~LkpgG~l~i~T  144 (204)
T d2fcaa1         106 NFSDPWPKKRHEKRRLTYSHFLKKYEEVMGKGGSIHFKT  144 (204)
T ss_dssp             ESCCCCCSGGGGGGSTTSHHHHHHHHHHHTTSCEEEEEE
T ss_pred             ccccccchhhhcchhhhHHHHHHHHHHhCCCCcEEEEEE
Confidence            4321               35778889999999987753

>d1v9la1 c.2.1.7 (A:180-421) Glutamate dehydrogenase {Pyrobaculum islandicum [TaxId: 2277]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Pyrobaculum islandicum [TaxId: 2277]

Probab=94.81  E-value=0.046  Score=37.89  Aligned_cols=37  Identities=19%  Similarity=0.337  Sum_probs=32.2

Q ss_pred             CCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCC
Q 028523           15 SPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGS   52 (208)
Q Consensus        15 ~~~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s   52 (208)
                      .--+|.+|.|.| .|.||..+++++...|++|++++.+
T Consensus        27 ~~l~g~~v~IqG-fGnVG~~~a~~L~~~Gakvv~vsD~   63 (242)
T d1v9la1          27 GGIEGKTVAIQG-MGNVGRWTAYWLEKMGAKVIAVSDI   63 (242)
T ss_dssp             SCCTTCEEEEEC-CSHHHHHHHHHHHTTTCEEEEEECS
T ss_pred             CCCCCCEEEEEC-CCHHHHHHHHHHHHcCCeEEEeecc
Confidence            334789999999 6999999999999999999988754

>d1ojta2 c.3.1.5 (A:276-400) Dihydrolipoamide dehydrogenase {Neisseria meningitidis [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Neisseria meningitidis [TaxId: 487]

Probab=94.75  E-value=0.027  Score=34.77  Aligned_cols=36  Identities=11%  Similarity=0.134  Sum_probs=31.8

Q ss_pred             CCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCH
Q 028523           17 KQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSK   53 (208)
Q Consensus        17 ~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~   53 (208)
                      +..++++|.|| |.+|+-+++..+.+|.+|.++.+++
T Consensus        24 ~~p~~vvIiGg-G~IG~E~A~~~~~~G~~Vtive~~~   59 (125)
T d1ojta2          24 EVPGKLLIIGG-GIIGLEMGTVYSTLGSRLDVVEMMD   59 (125)
T ss_dssp             CCCSEEEEESC-SHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred             ccCCeEEEECC-CHHHHHHHHHhhcCCCEEEEEEeec
Confidence            34689999996 9999999999999999999998664

>d1seza1 c.3.1.2 (A:13-329,A:442-497) Protoporphyrinogen oxidase {Tobacco (Nicotiana tabacum) [TaxId: 4097]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Protoporphyrinogen oxidase
species: Tobacco (Nicotiana tabacum) [TaxId: 4097]

Probab=94.72  E-value=0.018  Score=40.75  Aligned_cols=34  Identities=24%  Similarity=0.139  Sum_probs=29.8

Q ss_pred             CCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCH
Q 028523           19 GEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSK   53 (208)
Q Consensus        19 g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~   53 (208)
                      +++|+|.|| |..|++++..++..|.+|.+...++
T Consensus         1 ~KkV~IIGa-G~aGL~aA~~La~~G~~V~vlE~~~   34 (373)
T d1seza1           1 AKRVAVIGA-GVSGLAAAYKLKIHGLNVTVFEAEG   34 (373)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHTTSCEEEEECSSS
T ss_pred             CCEEEEECc-CHHHHHHHHHHHhCCCCEEEEeCCC
Confidence            578999996 9999999999999999999998653

>d1txga2 c.2.1.6 (A:1-180) Glycerol-3- phosphate dehydrogenase {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Glycerol-3- phosphate dehydrogenase
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=94.71  E-value=0.3  Score=31.86  Aligned_cols=82  Identities=17%  Similarity=0.129  Sum_probs=51.4

Q ss_pred             EEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHH--HHHHHHHh-----cCCC---eeEecCCCccHHHHHHhHCCCCcc
Q 028523           21 YVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKD--KVDLLKNK-----FGFD---EAFNYKEEPDLDAALKRYFPEGIN   90 (208)
Q Consensus        21 ~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~--~~~~~~~~-----~g~~---~v~~~~~~~~~~~~~~~~~~~~~d   90 (208)
                      .|.|.|+ |.+|.+.+..+...|.+|....+..+  ..+...+.     ++..   ..+... . +..+.+.     ..|
T Consensus         2 kI~ViGa-G~~GtalA~~la~~g~~V~l~~r~~~~~~~~~i~~~~~~~~~~~~~~~~~i~~~-~-~~~~~~~-----~ad   73 (180)
T d1txga2           2 IVSILGA-GAMGSALSVPLVDNGNEVRIWGTEFDTEILKSISAGREHPRLGVKLNGVEIFWP-E-QLEKCLE-----NAE   73 (180)
T ss_dssp             EEEEESC-CHHHHHHHHHHHHHCCEEEEECCGGGHHHHHHHHTTCCBTTTTBCCCSEEEECG-G-GHHHHHT-----TCS
T ss_pred             EEEEECC-CHHHHHHHHHHHHCCCEEEEEEecccHHHHHHHhhhhhhhhhcchhcccccccc-c-cHHHHHh-----ccc
Confidence            4789996 99999988888888899998886433  23333311     1100   011111 1 3444333     389


Q ss_pred             EEEeCCCchhHHHHHHhhcc
Q 028523           91 IYFENVGGKMLDAVLLNMRI  110 (208)
Q Consensus        91 ~v~d~~g~~~~~~~~~~l~~  110 (208)
                      +|+.++....+...++.+.+
T Consensus        74 ~Ii~avps~~~~~~~~~l~~   93 (180)
T d1txga2          74 VVLLGVSTDGVLPVMSRILP   93 (180)
T ss_dssp             EEEECSCGGGHHHHHHHHTT
T ss_pred             hhhcccchhhhHHHHHhhcc
Confidence            99999998777777765555

>d1h6va2 c.3.1.5 (A:171-292) Mammalian thioredoxin reductase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Mammalian thioredoxin reductase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=94.69  E-value=0.026  Score=34.66  Aligned_cols=34  Identities=21%  Similarity=0.042  Sum_probs=29.8

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCC
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGS   52 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s   52 (208)
                      ..++++|.|| |.+|+-.++.++.+|.+|.++.++
T Consensus        19 ~P~~vvIIGg-G~iG~E~A~~l~~lG~~Vtii~~~   52 (122)
T d1h6va2          19 CPGKTLVVGA-SYVALECAGFLAGIGLDVTVMVRS   52 (122)
T ss_dssp             CCCSEEEECC-SHHHHHHHHHHHHTTCCEEEEESS
T ss_pred             CCCeEEEECC-CccHHHHHHHHhhcCCeEEEEEec
Confidence            3467999996 999999999999999999988754

>d1tw3a2 c.66.1.12 (A:99-351) Carminomycin 4-O-methyltransferase {Streptomyces peucetius [TaxId: 1950]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Plant O-methyltransferase, C-terminal domain
domain: Carminomycin 4-O-methyltransferase
species: Streptomyces peucetius [TaxId: 1950]

Probab=94.67  E-value=0.13  Score=35.64  Aligned_cols=100  Identities=14%  Similarity=0.136  Sum_probs=61.5

Q ss_pred             HhcCCCCCCEEEEecCCchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHH---hcCCCeeEecCCCccHHHHHHhHCCC
Q 028523           12 EVCSPKQGEYVFVSAASGAVGQLVGQFAKLV-GCYVVGSAGSKDKVDLLKN---KFGFDEAFNYKEEPDLDAALKRYFPE   87 (208)
Q Consensus        12 ~~~~~~~g~~vli~ga~g~vG~~a~qla~~~-g~~v~~~~~s~~~~~~~~~---~~g~~~v~~~~~~~~~~~~~~~~~~~   87 (208)
                      +...+....+||=+|  +|.|..+..+++.. +.++++.+. ++..+.+++   +.|...-+..... ++.    +..+.
T Consensus        74 ~~~d~~~~~~VLDvG--cG~G~~~~~la~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~rv~~~~~-D~~----~~~~~  145 (253)
T d1tw3a2          74 AAYDWTNVRHVLDVG--GGKGGFAAAIARRAPHVSATVLEM-AGTVDTARSYLKDEGLSDRVDVVEG-DFF----EPLPR  145 (253)
T ss_dssp             HHSCCTTCSEEEEET--CTTSHHHHHHHHHCTTCEEEEEEC-TTHHHHHHHHHHHTTCTTTEEEEEC-CTT----SCCSS
T ss_pred             hhcCCccCCEEEEeC--CCCCHHHHHHHHhcceeEEEEccC-HHHHHHHHHHHHHhhcccchhhccc-cch----hhccc
Confidence            344667788999888  46788899999887 568888885 443443332   3343221111111 211    11223


Q ss_pred             CccEEEeCC-----Cc----hhHHHHHHhhccCCEEEEEec
Q 028523           88 GINIYFENV-----GG----KMLDAVLLNMRIQGRITLCGM  119 (208)
Q Consensus        88 ~~d~v~d~~-----g~----~~~~~~~~~l~~~G~~v~~g~  119 (208)
                      ++|+|+-..     +.    ..+..+.+.|+|||+++....
T Consensus       146 ~~D~v~~~~vlh~~~d~~~~~~L~~~~~~LkPGG~l~i~e~  186 (253)
T d1tw3a2         146 KADAIILSFVLLNWPDHDAVRILTRCAEALEPGGRILIHER  186 (253)
T ss_dssp             CEEEEEEESCGGGSCHHHHHHHHHHHHHTEEEEEEEEEEEC
T ss_pred             chhheeeccccccCCchhhHHHHHHHHHhcCCCcEEEEEec
Confidence            689987532     21    247788999999999988754

>d1m6ya2 c.66.1.23 (A:2-114,A:216-294) TM0872, methyltransferase domain {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: MraW-like putative methyltransferases
domain: TM0872, methyltransferase domain
species: Thermotoga maritima [TaxId: 2336]

Probab=94.66  E-value=0.33  Score=32.10  Aligned_cols=107  Identities=17%  Similarity=0.245  Sum_probs=65.3

Q ss_pred             HhcCCCCCCEEEEecCCchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHhc---CCC-eeEecCCCccHHHHHHhHCC
Q 028523           12 EVCSPKQGEYVFVSAASGAVGQLVGQFAKLV-GCYVVGSAGSKDKVDLLKNKF---GFD-EAFNYKEEPDLDAALKRYFP   86 (208)
Q Consensus        12 ~~~~~~~g~~vli~ga~g~vG~~a~qla~~~-g~~v~~~~~s~~~~~~~~~~~---g~~-~v~~~~~~~~~~~~~~~~~~   86 (208)
                      +...+++|+.+ |-.+ -|.|--+-.+++.. +.+|++++++++..+.+++.+   +.. ..+..+-. ++...+.....
T Consensus        17 ~~l~~~~~~~~-lD~t-~G~Gghs~~il~~~~~~~vi~~D~d~~~l~~a~~~l~~~~~r~~~~~~~f~-~~~~~~~~~~~   93 (192)
T d1m6ya2          17 EFLKPEDEKII-LDCT-VGEGGHSRAILEHCPGCRIIGIDVDSEVLRIAEEKLKEFSDRVSLFKVSYR-EADFLLKTLGI   93 (192)
T ss_dssp             HHHCCCTTCEE-EETT-CTTSHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHTGGGTTTEEEEECCGG-GHHHHHHHTTC
T ss_pred             HhhCCCCCCEE-EEec-CCCcHHHHHHHhcCCCCeEEEeechHHHHHHHHHhhccccccccchhHHHh-hHHHHHHHcCC
Confidence            44567888865 4443 33444444555544 679999999999988887533   322 23333222 45555555444


Q ss_pred             CCccEEEeCCC-ch---------------hHHHHHHhhccCCEEEEEeccc
Q 028523           87 EGINIYFENVG-GK---------------MLDAVLLNMRIQGRITLCGMIS  121 (208)
Q Consensus        87 ~~~d~v~d~~g-~~---------------~~~~~~~~l~~~G~~v~~g~~~  121 (208)
                      +.+|.|+--.| +.               .+..+.+.|+++|+++.+...+
T Consensus        94 ~~vdgIl~DlGvSs~Qld~~~r~~~~~~~~L~~a~~~Lk~gG~l~ii~f~s  144 (192)
T d1m6ya2          94 EKVDGILMDLGVSTYQLKGENRELENLKEFLKKAEDLLNPGGRIVVISFHS  144 (192)
T ss_dssp             SCEEEEEEECSCCHHHHHTSHTHHHHHHHHHHHGGGGEEEEEEEEEEESSH
T ss_pred             CCcceeeeccchhHhhhhhhhccchhHHHHHHHHHHhcCCCCeeeeecccc
Confidence            57888754344 11               3667778889999988775543

>d1h6da1 c.2.1.3 (A:51-212,A:375-433) Glucose-fructose oxidoreductase, N-terminal domain {Zymomonas mobilis [TaxId: 542]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glucose-fructose oxidoreductase, N-terminal domain
species: Zymomonas mobilis [TaxId: 542]

Probab=94.66  E-value=0.17  Score=34.34  Aligned_cols=90  Identities=10%  Similarity=0.177  Sum_probs=56.5

Q ss_pred             EEEEecCCchHHHH-HHHHHHHc-CCEEEEE-eCCHHHHHHHHHhcCCCe--eEecCCCccHHHHHHhHCCCCccEEEeC
Q 028523           21 YVFVSAASGAVGQL-VGQFAKLV-GCYVVGS-AGSKDKVDLLKNKFGFDE--AFNYKEEPDLDAALKRYFPEGINIYFEN   95 (208)
Q Consensus        21 ~vli~ga~g~vG~~-a~qla~~~-g~~v~~~-~~s~~~~~~~~~~~g~~~--v~~~~~~~~~~~~~~~~~~~~~d~v~d~   95 (208)
                      +|.|.| +|.+|.. .+...+.. +.+++++ ++++++.+.+.+++|.+.  +..++   ++.+.+   ....+|+|+.+
T Consensus        35 riaiIG-~G~~~~~~~~~~~~~~~~~~ivav~d~~~~~a~~~~~~~~i~~~~~~~~~---d~~ell---~~~~iD~V~I~  107 (221)
T d1h6da1          35 GYAIVG-LGKYALNQILPGFAGCQHSRIEALVSGNAEKAKIVAAEYGVDPRKIYDYS---NFDKIA---KDPKIDAVYII  107 (221)
T ss_dssp             EEEEEC-CSHHHHHTHHHHTTTCSSEEEEEEECSCHHHHHHHHHHTTCCGGGEECSS---SGGGGG---GCTTCCEEEEC
T ss_pred             EEEEEc-CcHHHHHHHHHHHHhCCCceEEEEecCCHHHHHHHHHhhccccccccccC---chhhhc---ccccceeeeec
Confidence            678889 5888863 44444444 6788855 556777666665887642  33343   332222   12369999999


Q ss_pred             CCc-hhHHHHHHhhccCCEEEEEe
Q 028523           96 VGG-KMLDAVLLNMRIQGRITLCG  118 (208)
Q Consensus        96 ~g~-~~~~~~~~~l~~~G~~v~~g  118 (208)
                      +.. .....+..+|..|-.+ ++.
T Consensus       108 tp~~~H~~~~~~al~~gk~v-~~E  130 (221)
T d1h6da1         108 LPNSLHAEFAIRAFKAGKHV-MCE  130 (221)
T ss_dssp             SCGGGHHHHHHHHHHTTCEE-EEC
T ss_pred             cchhhhhhHHHHhhhcchhh-hcC
Confidence            884 5677888888776554 443

>d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-N-acetylglucosamine 4-epimerase WbpP
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=94.63  E-value=0.024  Score=41.17  Aligned_cols=34  Identities=18%  Similarity=0.182  Sum_probs=30.7

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeC
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAG   51 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~   51 (208)
                      .-.+|||+||+|-+|...+..+...|.+|+++++
T Consensus        15 ~~k~iLVTG~tGfIGs~lv~~L~~~g~~V~~~d~   48 (341)
T d1sb8a_          15 QPKVWLITGVAGFIGSNLLETLLKLDQKVVGLDN   48 (341)
T ss_dssp             SCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEEC
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCcCEEEEEEC
Confidence            4468999999999999999999999999999874

>d1djqa3 c.4.1.1 (A:341-489,A:646-729) Trimethylamine dehydrogenase, middle domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Trimethylamine dehydrogenase, middle domain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=94.63  E-value=0.024  Score=38.93  Aligned_cols=37  Identities=19%  Similarity=0.216  Sum_probs=32.4

Q ss_pred             CCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHH
Q 028523           17 KQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKD   54 (208)
Q Consensus        17 ~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~   54 (208)
                      +.+++|+|.|| |+.|+.++..++..|.+|.++..+++
T Consensus        47 ~~~k~VvIIGa-GpAGl~aA~~l~~~G~~v~l~E~~~~   83 (233)
T d1djqa3          47 KNKDSVLIVGA-GPSGSEAARVLMESGYTVHLTDTAEK   83 (233)
T ss_dssp             SSCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred             cCCceEEEEcc-cHHHHHHHHHHHHhccceeeEeeccc
Confidence            46789999996 99999999999999999999986653

>d1n2sa_ c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {Salmonella enterica serovar typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD)
species: Salmonella enterica serovar typhimurium [TaxId: 90371]

Probab=94.61  E-value=0.016  Score=41.06  Aligned_cols=62  Identities=10%  Similarity=0.227  Sum_probs=37.3

Q ss_pred             EEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHHHHhHCCCCccEEEeCCC
Q 028523           21 YVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVG   97 (208)
Q Consensus        21 ~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~d~v~d~~g   97 (208)
                      +|||+||+|-+|...+..+...| +++++++....       +    ..|..+...+.+.+++.   ++|+||++++
T Consensus         2 KILItG~tGfiG~~l~~~L~~~g-~~v~~~~~~~~-------~----~~Dl~~~~~~~~~i~~~---~~D~Vih~Aa   63 (298)
T d1n2sa_           2 NILLFGKTGQVGWELQRSLAPVG-NLIALDVHSKE-------F----CGDFSNPKGVAETVRKL---RPDVIVNAAA   63 (298)
T ss_dssp             EEEEECTTSHHHHHHHHHTTTTS-EEEEECTTCSS-------S----CCCTTCHHHHHHHHHHH---CCSEEEECCC
T ss_pred             EEEEECCCCHHHHHHHHHHHhCC-CEEEEECCCcc-------c----cCcCCCHHHHHHHHHHc---CCCEEEEecc
Confidence            58999999999999888776655 45555533211       1    12222221233333322   5899999886

>d3grsa2 c.3.1.5 (A:166-290) Glutathione reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.55  E-value=0.028  Score=34.66  Aligned_cols=34  Identities=9%  Similarity=0.017  Sum_probs=30.8

Q ss_pred             CCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCH
Q 028523           19 GEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSK   53 (208)
Q Consensus        19 g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~   53 (208)
                      .++++|.|| |.+|+-+++.++.+|.+|.++.+++
T Consensus        22 pk~vvIvGg-G~iG~E~A~~l~~~G~~Vtlv~~~~   55 (125)
T d3grsa2          22 PGRSVIVGA-GYIAVEMAGILSALGSKTSLMIRHD   55 (125)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             CCEEEEEcC-CccHHHHHHHHhcCCcEEEEEeecc
Confidence            378999996 9999999999999999999999764

>d1q1ra2 c.3.1.5 (A:115-247) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Putidaredoxin reductase
species: Pseudomonas putida [TaxId: 303]

Probab=94.53  E-value=0.043  Score=34.22  Aligned_cols=39  Identities=15%  Similarity=0.020  Sum_probs=34.0

Q ss_pred             CCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHH
Q 028523           15 SPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKD   54 (208)
Q Consensus        15 ~~~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~   54 (208)
                      .++.+.+++|.|| |.+|.-++..++..|.+|.++.+++.
T Consensus        31 ~~~~~k~v~VIGg-G~iG~E~A~~l~~~g~~Vtvie~~~~   69 (133)
T d1q1ra2          31 QLIADNRLVVIGG-GYIGLEVAATAIKANMHVTLLDTAAR   69 (133)
T ss_dssp             TCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred             hhccCCEEEEECC-chHHHHHHHHHHhhCcceeeeeeccc
Confidence            4567899999996 99999999999999999999997653

>d1lvla2 c.3.1.5 (A:151-265) Dihydrolipoamide dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=94.49  E-value=0.034  Score=33.66  Aligned_cols=34  Identities=18%  Similarity=0.220  Sum_probs=30.3

Q ss_pred             CCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCH
Q 028523           19 GEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSK   53 (208)
Q Consensus        19 g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~   53 (208)
                      .++++|.|| |.+|.-+++.++.+|.+|.++.+.+
T Consensus        21 p~~vvIiGg-G~~G~E~A~~l~~~g~~Vtlve~~~   54 (115)
T d1lvla2          21 PQHLVVVGG-GYIGLELGIAYRKLGAQVSVVEARE   54 (115)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred             CCeEEEECC-CHHHHHHHHHHhhcccceEEEeeec
Confidence            478999996 9999999999999999999988664

>d2hjsa1 c.2.1.3 (A:3-129,A:320-336) Usg-1 protein homolog PA3116 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Usg-1 protein homolog PA3116
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=94.48  E-value=0.011  Score=37.61  Aligned_cols=89  Identities=11%  Similarity=-0.001  Sum_probs=49.2

Q ss_pred             EEEEecCCchHHHHHHHHHHHc---CCEEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHHHHhHCCCCccEEEeCCC
Q 028523           21 YVFVSAASGAVGQLVGQFAKLV---GCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVG   97 (208)
Q Consensus        21 ~vli~ga~g~vG~~a~qla~~~---g~~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~d~v~d~~g   97 (208)
                      +|.|.||+|-+|+-.++++...   ..++....++...-+.+.  +..... ...   +.    ......+.|++|-+.+
T Consensus         4 nVaIvGATGyvG~eli~lL~~~~hP~~~l~~~~s~~~~Gk~i~--~~~~~~-~~~---~~----~~~~~~~~d~vf~a~p   73 (144)
T d2hjsa1           4 NVAVVGATGSVGEALVGLLDERDFPLHRLHLLASAESAGQRMG--FAESSL-RVG---DV----DSFDFSSVGLAFFAAA   73 (144)
T ss_dssp             CEEEETTTSHHHHHHHHHHHHTTCCCSCEEEEECTTTTTCEEE--ETTEEE-ECE---EG----GGCCGGGCSEEEECSC
T ss_pred             EEEEECCCCHHHHHHHHHHHhcCCCceEEEEEeecccCCccee--eccccc-hhc---cc----hhhhhccceEEEecCC
Confidence            5889999999999999999643   346766653322111111  111110 000   00    0001115899999999


Q ss_pred             ch-hHHHHHHhhccCCEEEEEec
Q 028523           98 GK-MLDAVLLNMRIQGRITLCGM  119 (208)
Q Consensus        98 ~~-~~~~~~~~l~~~G~~v~~g~  119 (208)
                      .. +....-.....+..++..+.
T Consensus        74 ~~~s~~~~~~~~~~g~~VID~Ss   96 (144)
T d2hjsa1          74 AEVSRAHAERARAAGCSVIDLSG   96 (144)
T ss_dssp             HHHHHHHHHHHHHTTCEEEETTC
T ss_pred             cchhhhhccccccCCceEEeech
Confidence            65 44445555556666666443

>d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.47  E-value=0.025  Score=41.12  Aligned_cols=33  Identities=21%  Similarity=0.324  Sum_probs=29.5

Q ss_pred             EE-EEecCCchHHHHHHHHHHHcCCEEEEEeCCH
Q 028523           21 YV-FVSAASGAVGQLVGQFAKLVGCYVVGSAGSK   53 (208)
Q Consensus        21 ~v-li~ga~g~vG~~a~qla~~~g~~v~~~~~s~   53 (208)
                      .| ||+||+|-+|..++..+...|++|+++++..
T Consensus         2 KI~LVTG~tGfIG~~l~~~Ll~~g~~V~~i~r~~   35 (347)
T d1t2aa_           2 NVALITGITGQDGSYLAEFLLEKGYEVHGIVRRS   35 (347)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCC
T ss_pred             CEEEEecCCcHHHHHHHHHHHHCcCEEEEEECCC
Confidence            46 9999999999999998888999999999754

>d1bgva1 c.2.1.7 (A:195-449) Glutamate dehydrogenase {Clostridium symbiosum [TaxId: 1512]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Clostridium symbiosum [TaxId: 1512]

Probab=94.41  E-value=0.056  Score=37.74  Aligned_cols=36  Identities=19%  Similarity=0.158  Sum_probs=31.5

Q ss_pred             CCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCC
Q 028523           16 PKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGS   52 (208)
Q Consensus        16 ~~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s   52 (208)
                      --+|.+|.|.| .|.||..+++.+...|++|++++.+
T Consensus        33 ~l~g~~v~IQG-fGnVG~~~a~~L~e~GakvvavsD~   68 (255)
T d1bgva1          33 TLVGKTVALAG-FGNVAWGAAKKLAELGAKAVTLSGP   68 (255)
T ss_dssp             CSTTCEEEECC-SSHHHHHHHHHHHHHTCEEEEEEET
T ss_pred             CCCCCEEEEEC-CCHHHHHHHHHHHHcCCeEEEEecC
Confidence            34788999999 6999999999999999999988753

>d2igta1 c.66.1.51 (A:1-309) Putative methyltransferase Atu0340 {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Putative methyltransferase Atu0340
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=94.39  E-value=0.24  Score=35.43  Aligned_cols=100  Identities=18%  Similarity=0.181  Sum_probs=57.4

Q ss_pred             CCCCCCEEE-EecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhc---CCCe-eEecCCCccHHHHHHhHC--CC
Q 028523           15 SPKQGEYVF-VSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKF---GFDE-AFNYKEEPDLDAALKRYF--PE   87 (208)
Q Consensus        15 ~~~~g~~vl-i~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~---g~~~-v~~~~~~~~~~~~~~~~~--~~   87 (208)
                      ...++.+|| ++.++|+.++   .++ ..|++|+.++.|+...+.+++.+   |... -+.+-.. +..+.+++..  +.
T Consensus       129 ~~~~~~rVLdlf~~tG~~sl---~aa-~~GA~V~~VD~s~~al~~a~~N~~ln~~~~~~~~~i~~-D~~~~l~~~~~~~~  203 (309)
T d2igta1         129 TADRPLKVLNLFGYTGVASL---VAA-AAGAEVTHVDASKKAIGWAKENQVLAGLEQAPIRWICE-DAMKFIQREERRGS  203 (309)
T ss_dssp             HSSSCCEEEEETCTTCHHHH---HHH-HTTCEEEEECSCHHHHHHHHHHHHHHTCTTSCEEEECS-CHHHHHHHHHHHTC
T ss_pred             hccCCCeEEEecCCCcHHHH---HHH-hCCCeEEEEeChHHHHHHHHHhhhhhcccCCcEEEEeC-CHHHhHHHHhhcCC
Confidence            456788888 4444554444   444 35889999999999888887522   3321 1222222 5555554432  23


Q ss_pred             CccEEEeC---CC-c---------h----hHHHHHHhhccCCEEEEEec
Q 028523           88 GINIYFEN---VG-G---------K----MLDAVLLNMRIQGRITLCGM  119 (208)
Q Consensus        88 ~~d~v~d~---~g-~---------~----~~~~~~~~l~~~G~~v~~g~  119 (208)
                      .||+||--   .+ +         +    .+..+..+++++|.++.+..
T Consensus       204 ~fD~IilDPP~f~~~~~~~~~~~~~~~~~l~~~~~~ll~~~g~~ll~t~  252 (309)
T d2igta1         204 TYDIILTDPPKFGRGTHGEVWQLFDHLPLMLDICREILSPKALGLVLTA  252 (309)
T ss_dssp             CBSEEEECCCSEEECTTCCEEEHHHHHHHHHHHHHHTBCTTCCEEEEEE
T ss_pred             CCCEEEECCCcccccccchhHHHHHHHHHHHHHHHHhcCCCCCEEEEec
Confidence            79998741   11 1         0    23456678888887555443

>d2fyta1 c.66.1.6 (A:238-548) Protein arginine N-methyltransferase 3, PRMT3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arginine methyltransferase
domain: Protein arginine N-methyltransferase 3, PRMT3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.24  E-value=0.067  Score=38.40  Aligned_cols=44  Identities=20%  Similarity=0.100  Sum_probs=30.5

Q ss_pred             HHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCHHH
Q 028523            9 GFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGC-YVVGSAGSKDK   55 (208)
Q Consensus         9 ~l~~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g~-~v~~~~~s~~~   55 (208)
                      |+.+...+.+|++||-.|+  |.|..++.+|+ .|+ +|++++.++.-
T Consensus        26 ai~~~~~~~~~~~VLDiGc--G~G~lsl~aa~-~Ga~~V~aid~s~~~   70 (311)
T d2fyta1          26 FIYQNPHIFKDKVVLDVGC--GTGILSMFAAK-AGAKKVLGVDQSEIL   70 (311)
T ss_dssp             HHHHCGGGTTTCEEEEETC--TTSHHHHHHHH-TTCSEEEEEESSTHH
T ss_pred             HHHhccccCCcCEEEEECC--CCCHHHHHHHH-cCCCEEEEEeCHHHH
Confidence            3444446678999999984  35666665555 476 89999988753

>d1mlda1 c.2.1.5 (A:1-144) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=94.24  E-value=0.33  Score=30.43  Aligned_cols=70  Identities=20%  Similarity=0.134  Sum_probs=45.0

Q ss_pred             EEEEecCCchHHHHHHHHHHHcCC--EEEEEeCCHHHHHHHHHhcC-CCeeE----ecCCCccHHHHHHhHCCCCccEEE
Q 028523           21 YVFVSAASGAVGQLVGQFAKLVGC--YVVGSAGSKDKVDLLKNKFG-FDEAF----NYKEEPDLDAALKRYFPEGINIYF   93 (208)
Q Consensus        21 ~vli~ga~g~vG~~a~qla~~~g~--~v~~~~~s~~~~~~~~~~~g-~~~v~----~~~~~~~~~~~~~~~~~~~~d~v~   93 (208)
                      .|.|.||+|.+|...+.++...+.  +++..+..+.+.+ +. ++. .....    ..... ++.+.++     +.|+|+
T Consensus         2 Kv~IiGA~G~VG~~~A~~l~~~~~~~elvLiDi~~~~~~-a~-Dl~~~~~~~~~~~~~~~~-~~~~~~~-----~aDivV   73 (144)
T d1mlda1           2 KVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAHTPGV-AA-DLSHIETRATVKGYLGPE-QLPDCLK-----GCDVVV   73 (144)
T ss_dssp             EEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSSHHHH-HH-HHTTSSSSCEEEEEESGG-GHHHHHT-----TCSEEE
T ss_pred             eEEEECCCChHHHHHHHHHHhCCccceEEEEeccccchh-hH-HHhhhhhhcCCCeEEcCC-ChHHHhC-----CCCEEE
Confidence            688999889999999998888876  7888887665433 33 332 11110    11112 4444443     489999


Q ss_pred             eCCCc
Q 028523           94 ENVGG   98 (208)
Q Consensus        94 d~~g~   98 (208)
                      -+.|.
T Consensus        74 itag~   78 (144)
T d1mlda1          74 IPAGV   78 (144)
T ss_dssp             ECCSC
T ss_pred             ECCCc
Confidence            98873

>d1i36a2 c.2.1.6 (A:1-152) Conserved hypothetical protein MTH1747 {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Conserved hypothetical protein MTH1747
species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]

Probab=94.24  E-value=0.2  Score=31.69  Aligned_cols=39  Identities=21%  Similarity=0.135  Sum_probs=30.0

Q ss_pred             EEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH
Q 028523           21 YVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLK   60 (208)
Q Consensus        21 ~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~   60 (208)
                      +|-|.| .|.+|...++-++..|.+|++..+++++....+
T Consensus         2 kIgiIG-~G~mG~~ia~~l~~~g~~v~~~~~~~~~~~~~~   40 (152)
T d1i36a2           2 RVGFIG-FGEVAQTLASRLRSRGVEVVTSLEGRSPSTIER   40 (152)
T ss_dssp             EEEEES-CSHHHHHHHHHHHHTTCEEEECCTTCCHHHHHH
T ss_pred             EEEEEc-HHHHHHHHHHHHHHCCCeEEEEcCchhHHHHHh
Confidence            477888 599999999888888999988876665544433

>d2fy8a1 c.2.1.9 (A:116-244) Potassium channel-related protein MthK {Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Potassium channel-related protein MthK
species: Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]

Probab=94.13  E-value=0.2  Score=30.60  Aligned_cols=93  Identities=11%  Similarity=-0.040  Sum_probs=60.1

Q ss_pred             CEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHHHHhHCCCCccEEEeCCCch
Q 028523           20 EYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVGGK   99 (208)
Q Consensus        20 ~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~d~v~d~~g~~   99 (208)
                      ++++|.|. |.+|..+++.++  +.++++++.++++.+.++ ..|...+. . +. .-.+.+++..-..++.++-+...+
T Consensus         1 kHivI~G~-g~~g~~l~~~L~--~~~i~vi~~d~~~~~~~~-~~~~~~i~-G-d~-~~~~~L~~a~i~~A~~vi~~~~~d   73 (129)
T d2fy8a1           1 RHVVICGW-SESTLECLRELR--GSEVFVLAEDENVRKKVL-RSGANFVH-G-DP-TRVSDLEKANVRGARAVIVNLESD   73 (129)
T ss_dssp             CCEEEESC-CHHHHHHHHTSC--GGGEEEEESCTTHHHHHH-HTTCEEEE-S-CT-TSHHHHHHTTCTTCSEEEECCSSH
T ss_pred             CEEEEECC-CHHHHHHHHHHc--CCCCEEEEcchHHHHHHH-hcCccccc-c-cc-CCHHHHHHhhhhcCcEEEEeccch
Confidence            35788885 999988777664  446788888888888887 67764332 2 22 223455554444788898888754


Q ss_pred             h----HHHHHHhhccCCEEEEEec
Q 028523          100 M----LDAVLLNMRIQGRITLCGM  119 (208)
Q Consensus       100 ~----~~~~~~~l~~~G~~v~~g~  119 (208)
                      .    .....+.+.|..+++....
T Consensus        74 ~~n~~~~~~~r~~~~~~~iia~~~   97 (129)
T d2fy8a1          74 SETIHCILGIRKIDESVRIIAEAE   97 (129)
T ss_dssp             HHHHHHHHHHHHHCSSSCEEEECS
T ss_pred             hhhHHHHHHHHHHCCCceEEEEEc
Confidence            2    3345556677776665533

>d2cvoa1 c.2.1.3 (A:68-218,A:384-415) Putative semialdehyde dehydrogenase {Rice (Oryza sativa) [TaxId: 4530]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Putative semialdehyde dehydrogenase
species: Rice (Oryza sativa) [TaxId: 4530]

Probab=94.06  E-value=0.031  Score=37.00  Aligned_cols=94  Identities=7%  Similarity=-0.042  Sum_probs=52.0

Q ss_pred             EEEEecCCchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHhcCCCe-eEecCCCccHHHHHHhHCCCCccEEEeCCCc
Q 028523           21 YVFVSAASGAVGQLVGQFAKLV-GCYVVGSAGSKDKVDLLKNKFGFDE-AFNYKEEPDLDAALKRYFPEGINIYFENVGG   98 (208)
Q Consensus        21 ~vli~ga~g~vG~~a~qla~~~-g~~v~~~~~s~~~~~~~~~~~g~~~-v~~~~~~~~~~~~~~~~~~~~~d~v~d~~g~   98 (208)
                      +|.|.||||-+|+-.++++... ..++.....+...-..+. +..... ..+........    +....+.|++|-+++.
T Consensus         7 kVaIlGATGyvG~elirLL~~HP~~ei~~l~S~~~aG~~~~-~~~~~~~~~~~~~~~~~~----~~~~~~~Dvvf~alp~   81 (183)
T d2cvoa1           7 RIAVLGASGYTGAEIVRLLANHPQFRIKVMTADRKAGEQFG-SVFPHLITQDLPNLVAVK----DADFSNVDAVFCCLPH   81 (183)
T ss_dssp             EEEEESCSSHHHHHHHHHHTTCSSEEEEEEECSTTTTSCHH-HHCGGGTTSCCCCCBCGG----GCCGGGCSEEEECCSS
T ss_pred             EEEEECcccHHHHHHHHHHHhCCCceEEEEeccccCCCccc-cccccccccccccchhhh----hhhhcccceeeecccc
Confidence            5789999999999999999765 447665553322111121 111100 00000000000    0001158999999996


Q ss_pred             hhHHHHHHhhccCCEEEEEec
Q 028523           99 KMLDAVLLNMRIQGRITLCGM  119 (208)
Q Consensus        99 ~~~~~~~~~l~~~G~~v~~g~  119 (208)
                      .........+...+..+....
T Consensus        82 ~~s~~~~~~l~~~~~~v~~~~  102 (183)
T d2cvoa1          82 GTTQEIIKGLPQELKIVDLSA  102 (183)
T ss_dssp             SHHHHHHHTSCSSCEEEECSS
T ss_pred             chHHHHHHHHHhcCcccccch
Confidence            555555577778888776443

>d1k0ia1 c.3.1.2 (A:1-173,A:276-394) p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: p-Hydroxybenzoate hydroxylase, PHBH
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=93.91  E-value=0.028  Score=39.74  Aligned_cols=33  Identities=27%  Similarity=0.253  Sum_probs=29.3

Q ss_pred             EEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHH
Q 028523           21 YVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKD   54 (208)
Q Consensus        21 ~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~   54 (208)
                      .|+|.|| |++|++++..++..|.+|.++.++++
T Consensus         4 ~V~IvGa-Gp~Gl~~A~~L~~~G~~v~vlE~~~~   36 (292)
T d1k0ia1           4 QVAIIGA-GPSGLLLGQLLHKAGIDNVILERQTP   36 (292)
T ss_dssp             SEEEECC-SHHHHHHHHHHHHHTCCEEEECSSCH
T ss_pred             CEEEECc-CHHHHHHHHHHHHCCCCEEEEeCCCC
Confidence            4899997 99999999999999999999987653

>d1inla_ c.66.1.17 (A:) Spermidine synthase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Spermidine synthase
domain: Spermidine synthase
species: Thermotoga maritima [TaxId: 2336]

Probab=93.89  E-value=0.082  Score=37.72  Aligned_cols=96  Identities=7%  Similarity=0.061  Sum_probs=61.7

Q ss_pred             CCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHhcCC-------C--eeEecCCCccHHHHHHhHCC
Q 028523           17 KQGEYVFVSAASGAVGQLVGQFAKLVGC-YVVGSAGSKDKVDLLKNKFGF-------D--EAFNYKEEPDLDAALKRYFP   86 (208)
Q Consensus        17 ~~g~~vli~ga~g~vG~~a~qla~~~g~-~v~~~~~s~~~~~~~~~~~g~-------~--~v~~~~~~~~~~~~~~~~~~   86 (208)
                      +..++|||.|+  |-|..+-.++++.+. +|.++..+++-.+.+++-+..       +  .++ .  . +..+.+++ .+
T Consensus        88 ~~pk~VLiiGg--G~G~~~r~~l~~~~~~~i~~VEIDp~Vi~~a~~~~~~~~~~~~d~rv~v~-~--~-Da~~~l~~-~~  160 (295)
T d1inla_          88 PNPKKVLIIGG--GDGGTLREVLKHDSVEKAILCEVDGLVIEAARKYLKQTSCGFDDPRAEIV-I--A-NGAEYVRK-FK  160 (295)
T ss_dssp             SSCCEEEEEEC--TTCHHHHHHTTSTTCSEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEE-E--S-CHHHHGGG-CS
T ss_pred             CCCceEEEecC--CchHHHHHHHhcCCCceEEEecCCHHHHHHHHHHHHhhcccccCCCcEEE-h--h-hHHHHHhc-CC
Confidence            45679999996  345566677777765 899999998877777632211       1  122 1  2 45555554 33


Q ss_pred             CCccEEEe-CCCc-----------hhHHHHHHhhccCCEEEEEec
Q 028523           87 EGINIYFE-NVGG-----------KMLDAVLLNMRIQGRITLCGM  119 (208)
Q Consensus        87 ~~~d~v~d-~~g~-----------~~~~~~~~~l~~~G~~v~~g~  119 (208)
                      +.+|+||- +...           +.+..+.++|+++|.++.-..
T Consensus       161 ~~yDvIi~D~~dp~~~~~~~L~t~efy~~~~~~L~~~Gi~v~q~~  205 (295)
T d1inla_         161 NEFDVIIIDSTDPTAGQGGHLFTEEFYQACYDALKEDGVFSAETE  205 (295)
T ss_dssp             SCEEEEEEEC----------CCSHHHHHHHHHHEEEEEEEEEECC
T ss_pred             CCCCEEEEcCCCCCcCchhhhccHHHHHHHHhhcCCCcEEEEecC
Confidence            47999864 2211           147788999999999887543

>d1xhca2 c.3.1.5 (A:104-225) NADH oxidase /nitrite reductase {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH oxidase /nitrite reductase
species: Pyrococcus furiosus [TaxId: 2261]

Probab=93.81  E-value=0.055  Score=33.09  Aligned_cols=36  Identities=11%  Similarity=0.033  Sum_probs=31.5

Q ss_pred             CCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCH
Q 028523           17 KQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSK   53 (208)
Q Consensus        17 ~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~   53 (208)
                      +.+.+++|.|| |.+|+-+++.+...|.+|.++.+++
T Consensus        30 ~~~~~vvIiGg-G~iG~E~A~~l~~~g~~Vtlv~~~~   65 (122)
T d1xhca2          30 ENSGEAIIIGG-GFIGLELAGNLAEAGYHVKLIHRGA   65 (122)
T ss_dssp             HHHSEEEEEEC-SHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             hcCCcEEEECC-cHHHHHHHHHhhcccceEEEEeccc
Confidence            45678999996 9999999999999999999998664

>d1gado1 c.2.1.3 (O:0-148,O:313-330) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Escherichia coli [TaxId: 562]

Probab=93.76  E-value=0.16  Score=32.87  Aligned_cols=94  Identities=18%  Similarity=0.149  Sum_probs=57.1

Q ss_pred             EEEEecCCchHHHHHHHHHHHcC-CEEEEEeCCH--HHHHHHHHhc----CC-Ce---------eEe------cCCCccH
Q 028523           21 YVFVSAASGAVGQLVGQFAKLVG-CYVVGSAGSK--DKVDLLKNKF----GF-DE---------AFN------YKEEPDL   77 (208)
Q Consensus        21 ~vli~ga~g~vG~~a~qla~~~g-~~v~~~~~s~--~~~~~~~~~~----g~-~~---------v~~------~~~~~~~   77 (208)
                      +|.|.| -|-+|..+.+.+.... .+++++-...  +.+.++. ++    |. +.         +++      +++. +.
T Consensus         3 kigING-FGRIGR~v~R~~~~~~~i~ivaINd~~~~~~~ayLl-~yDSvhG~~~~~v~~~~~~l~ing~~I~i~~~~-~p   79 (166)
T d1gado1           3 KVGING-FGRIGRIVFRAAQKRSDIEIVAINDLLDADYMAYML-KYDSTHGRFDGTVEVKDGHLIVNGKKIRVTAER-DP   79 (166)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHTCSSEEEEEEECSSCHHHHHHHH-HCCTTTCSCSSCEEEETTEEEETTEEEEEECCS-SG
T ss_pred             EEEEEC-CcHHHHHHHHHHhhCCCeEEEEEeCCCCHHHHhhhh-eecCCCCCcCCeEEEeCCEEEECCEEEEEEeCC-Ch
Confidence            478888 6999999999887653 5777776443  2344444 22    21 00         010      0111 11


Q ss_pred             HHHHHhHCCC--CccEEEeCCC-chhHHHHHHhhccCCEEEEEeccc
Q 028523           78 DAALKRYFPE--GINIYFENVG-GKMLDAVLLNMRIQGRITLCGMIS  121 (208)
Q Consensus        78 ~~~~~~~~~~--~~d~v~d~~g-~~~~~~~~~~l~~~G~~v~~g~~~  121 (208)
                          .++-.+  ++|+|+||+| ....+.+...+..|-.-|.+..+.
T Consensus        80 ----~~i~W~~~gvDiViEcTG~f~t~~~~~~hl~~gakkViiSaP~  122 (166)
T d1gado1          80 ----ANLKWDEVGVDVVAEATGLFLTDETARKHITAGAKKVVMTGPS  122 (166)
T ss_dssp             ----GGGCHHHHTCSEEEECSSSCCSHHHHTHHHHTTCSEEEESSCC
T ss_pred             ----HHCCccccCCCEEEEccccccCHHHHHHHhcCCCceEEeeccc
Confidence                111111  7999999999 567788888888887666666544

>d1djqa2 c.3.1.1 (A:490-645) Trimethylamine dehydrogenase, C-terminal domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: C-terminal domain of adrenodoxin reductase-like
domain: Trimethylamine dehydrogenase, C-terminal domain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=93.65  E-value=0.098  Score=33.26  Aligned_cols=49  Identities=14%  Similarity=0.060  Sum_probs=39.4

Q ss_pred             hhhHHHHHHHhcCCCCCCEEEEe--cCCchHHHHHHHHHHHcCCEEEEEeCCHH
Q 028523            3 GMTAYAGFFEVCSPKQGEYVFVS--AASGAVGQLVGQFAKLVGCYVVGSAGSKD   54 (208)
Q Consensus         3 ~~tA~~~l~~~~~~~~g~~vli~--ga~g~vG~~a~qla~~~g~~v~~~~~s~~   54 (208)
                      ++|...+| . .+..+++.++|+  | .|-+|+.+++.+...|.+|.++.+.+.
T Consensus        25 v~t~~d~l-~-~~~~~~~~vvi~d~g-gg~ig~e~A~~la~~G~~Vtlv~~~~~   75 (156)
T d1djqa2          25 QLTPEQVM-D-GKKKIGKRVVILNAD-TYFMAPSLAEKLATAGHEVTIVSGVHL   75 (156)
T ss_dssp             EECHHHHH-H-TCSCCCSEEEEEECC-CSSHHHHHHHHHHHTTCEEEEEESSCT
T ss_pred             EECHHHHh-c-CccccCCceEEEecC-CChHHHHHHHHHHHcCCeEEEEecCCc
Confidence            35777776 2 467788888887  5 489999999999999999999997653

>d1qzza2 c.66.1.12 (A:102-357) Aclacinomycin-10-hydroxylase RdmB {Streptomyces purpurascens [TaxId: 1924]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Plant O-methyltransferase, C-terminal domain
domain: Aclacinomycin-10-hydroxylase RdmB
species: Streptomyces purpurascens [TaxId: 1924]

Probab=93.59  E-value=0.21  Score=34.70  Aligned_cols=99  Identities=11%  Similarity=0.098  Sum_probs=61.2

Q ss_pred             cCCCCCCEEEEecCCchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHH---hcCCCeeEecCCCccHHHHHHhHCCCCc
Q 028523           14 CSPKQGEYVFVSAASGAVGQLVGQFAKLV-GCYVVGSAGSKDKVDLLKN---KFGFDEAFNYKEEPDLDAALKRYFPEGI   89 (208)
Q Consensus        14 ~~~~~g~~vli~ga~g~vG~~a~qla~~~-g~~v~~~~~s~~~~~~~~~---~~g~~~v~~~~~~~~~~~~~~~~~~~~~   89 (208)
                      -.+....+||=+|  +|.|..+..+++.. +.++++.+. ++-.+.+++   +.|....+..... ++.    +-.+.++
T Consensus        77 ~d~~~~~~vlDvG--~G~G~~~~~l~~~~P~~~~~~~Dl-p~~~~~a~~~~~~~~~~~ri~~~~~-d~~----~~~p~~~  148 (256)
T d1qzza2          77 YDWSAVRHVLDVG--GGNGGMLAAIALRAPHLRGTLVEL-AGPAERARRRFADAGLADRVTVAEG-DFF----KPLPVTA  148 (256)
T ss_dssp             SCCTTCCEEEEET--CTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEEC-CTT----SCCSCCE
T ss_pred             CCCccCCEEEEEC--CCCCHHHHHHHHhhcCcEEEEecC-hHHHHHHHHHHhhcCCcceeeeeee-ecc----ccccccc
Confidence            3566778898888  57789999999987 679999985 554444432   3343221111111 111    1122368


Q ss_pred             cEEEeCC-----C-c---hhHHHHHHhhccCCEEEEEecc
Q 028523           90 NIYFENV-----G-G---KMLDAVLLNMRIQGRITLCGMI  120 (208)
Q Consensus        90 d~v~d~~-----g-~---~~~~~~~~~l~~~G~~v~~g~~  120 (208)
                      |+++-.-     + .   ..+..+.+.|+|||+++.+...
T Consensus       149 D~v~~~~vLh~~~d~~~~~lL~~i~~~LkpgG~llI~d~~  188 (256)
T d1qzza2         149 DVVLLSFVLLNWSDEDALTILRGCVRALEPGGRLLVLDRA  188 (256)
T ss_dssp             EEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEECC
T ss_pred             hhhhccccccccCcHHHHHHHHHHHhhcCCcceeEEEEec
Confidence            8887432     2 1   1467889999999999987653

>d1wg8a2 c.66.1.23 (A:5-108,A:207-284) TM0872, methyltransferase domain {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: MraW-like putative methyltransferases
domain: TM0872, methyltransferase domain
species: Thermus thermophilus [TaxId: 274]

Probab=93.59  E-value=0.55  Score=30.67  Aligned_cols=104  Identities=16%  Similarity=0.236  Sum_probs=65.8

Q ss_pred             HhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCC--eeEecCCCccHHHHHHhHCCCCc
Q 028523           12 EVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFD--EAFNYKEEPDLDAALKRYFPEGI   89 (208)
Q Consensus        12 ~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~--~v~~~~~~~~~~~~~~~~~~~~~   89 (208)
                      ....+++|.. +|-+..|+=|+. ..+++. +.+|+++++.++....++ ..-..  ..+..+.. ++.+.+.....+++
T Consensus        12 ~~l~~~~g~~-~vD~T~G~GGhs-~~iL~~-~~~viaiD~D~~ai~~a~-~~~~~~~~~~~~~f~-~~~~~l~~~~~~~v   86 (182)
T d1wg8a2          12 DLLAVRPGGV-YVDATLGGAGHA-RGILER-GGRVIGLDQDPEAVARAK-GLHLPGLTVVQGNFR-HLKRHLAALGVERV   86 (182)
T ss_dssp             HHHTCCTTCE-EEETTCTTSHHH-HHHHHT-TCEEEEEESCHHHHHHHH-HTCCTTEEEEESCGG-GHHHHHHHTTCSCE
T ss_pred             HhcCCCCCCE-EEEeCCCCcHHH-HHHhcc-cCcEEEEhhhhhHHHHHh-hccccceeEeehHHH-HHHHHHHHcCCCcc
Confidence            3346788885 466555555554 344443 679999999999888887 44322  24444433 56555555444478


Q ss_pred             cEEEeCCC-ch---------------hHHHHHHhhccCCEEEEEecc
Q 028523           90 NIYFENVG-GK---------------MLDAVLLNMRIQGRITLCGMI  120 (208)
Q Consensus        90 d~v~d~~g-~~---------------~~~~~~~~l~~~G~~v~~g~~  120 (208)
                      |.|+=-.| +.               .+......++++|+++.+...
T Consensus        87 dgIl~DLGvSs~qld~~~re~~~~~~~L~~~~~~lk~gg~~~ii~fh  133 (182)
T d1wg8a2          87 DGILADLGVSSFHLDDPSDELNALKEFLEQAAEVLAPGGRLVVIAFH  133 (182)
T ss_dssp             EEEEEECSCCHHHHHCGGTHHHHHHHHHHHHHHHEEEEEEEEEEECS
T ss_pred             CEEEEEccCCHHHhhcchHHHHHHHHHHHHHHhhhCCCCeEEEEecc
Confidence            87764444 22               267778889999998877654

>d2iida1 c.3.1.2 (A:4-319,A:433-486) L-aminoacid oxidase {Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: L-aminoacid oxidase
species: Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]

Probab=93.58  E-value=0.056  Score=38.58  Aligned_cols=38  Identities=18%  Similarity=0.137  Sum_probs=31.7

Q ss_pred             CCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCH
Q 028523           15 SPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSK   53 (208)
Q Consensus        15 ~~~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~   53 (208)
                      ......+|+|+|| |..|+.++..+...|.+|.+...++
T Consensus        26 ~~~~pkkV~IIGa-G~aGLsaA~~L~~~G~~V~vlE~~~   63 (370)
T d2iida1          26 ATSNPKHVVIVGA-GMAGLSAAYVLAGAGHQVTVLEASE   63 (370)
T ss_dssp             CCSSCCEEEEECC-BHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred             CCCCCCeEEEECC-CHHHHHHHHHHHHCCCCEEEEeCCC
Confidence            3455678999996 9999999988888899999998653

>d1ldna1 c.2.1.5 (A:15-162) Lactate dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=93.51  E-value=0.48  Score=29.76  Aligned_cols=38  Identities=26%  Similarity=0.154  Sum_probs=30.6

Q ss_pred             CCCCEEEEecCCchHHHHHHHHHHHcCC--EEEEEeCCHHH
Q 028523           17 KQGEYVFVSAASGAVGQLVGQFAKLVGC--YVVGSAGSKDK   55 (208)
Q Consensus        17 ~~g~~vli~ga~g~vG~~a~qla~~~g~--~v~~~~~s~~~   55 (208)
                      ..+.+|.|.|+ |.+|...+..+...+.  +++..+..+++
T Consensus         4 ~~~~KI~IiGa-G~vG~~~a~~l~~~~l~~el~L~Di~~~~   43 (148)
T d1ldna1           4 NGGARVVVIGA-GFVGASYVFALMNQGIADEIVLIDANESK   43 (148)
T ss_dssp             TTSCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHH
T ss_pred             CCCCeEEEECc-CHHHHHHHHHHHhcCCCceEEEEeecccc
Confidence            35668999996 9999998888877765  79999877765

>d1sqga2 c.66.1.38 (A:145-428) Ribosomal RNA small subunit methyltransferase B, RsmB (Sun, Fmu/Fmv), C-terminal domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: NOL1/NOP2/sun
domain: Ribosomal RNA small subunit methyltransferase B, RsmB (Sun, Fmu/Fmv), C-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=93.50  E-value=0.54  Score=33.09  Aligned_cols=101  Identities=12%  Similarity=0.153  Sum_probs=61.6

Q ss_pred             hcCCCCCCEEEEecCCchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHH---hcCCCee-EecCCCccHHHHHHhHCCC
Q 028523           13 VCSPKQGEYVFVSAASGAVGQLVGQFAKLV-GCYVVGSAGSKDKVDLLKN---KFGFDEA-FNYKEEPDLDAALKRYFPE   87 (208)
Q Consensus        13 ~~~~~~g~~vli~ga~g~vG~~a~qla~~~-g~~v~~~~~s~~~~~~~~~---~~g~~~v-~~~~~~~~~~~~~~~~~~~   87 (208)
                      ....++|++||=..| + -|--+.+++... ..+|++.+.++.+...+++   .+|...+ +...+. ....   ....+
T Consensus        97 ~L~~~~g~~vLD~CA-a-PGgKt~~la~l~~~~~i~a~d~~~~R~~~l~~~~~r~g~~~~~~~~~~~-~~~~---~~~~~  170 (284)
T d1sqga2          97 WLAPQNGEHILDLCA-A-PGGKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKRLGMKATVKQGDGR-YPSQ---WCGEQ  170 (284)
T ss_dssp             HHCCCTTCEEEEESC-T-TCHHHHHHHHHCTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEEECCTT-CTHH---HHTTC
T ss_pred             ccCccccceeEeccC-c-cccchhhhhhhhhhhhhhhhhcchhhhhhHhhhhhcccccceeeecccc-ccch---hcccc
Confidence            346889999886543 2 233345555544 3589999999998766643   5677543 222222 2211   12233


Q ss_pred             CccEEEe---CCCchh--------------------------HHHHHHhhccCCEEEEEec
Q 028523           88 GINIYFE---NVGGKM--------------------------LDAVLLNMRIQGRITLCGM  119 (208)
Q Consensus        88 ~~d~v~d---~~g~~~--------------------------~~~~~~~l~~~G~~v~~g~  119 (208)
                      .||.|+-   |+|...                          +..++..+++||++|..-.
T Consensus       171 ~fd~IL~DaPCSg~G~~rr~p~~~~~~~~~~~~~l~~lQ~~iL~~a~~~lk~gG~lvYsTC  231 (284)
T d1sqga2         171 QFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTLVYATC  231 (284)
T ss_dssp             CEEEEEEECCCCCGGGTTTCTTHHHHCCTTHHHHHHHHHHHHHHHHGGGEEEEEEEEEEES
T ss_pred             cccEEEEeccccccCccccccchhhccccchhhHHHHHHHHHHHHHHHhcCCCceEEEeee
Confidence            6998854   666321                          4667888999999887644

>d1obfo1 c.2.1.3 (O:1-152,O:315-335) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Achromobacter xylosoxidans [TaxId: 85698]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Achromobacter xylosoxidans [TaxId: 85698]

Probab=93.49  E-value=0.37  Score=31.29  Aligned_cols=94  Identities=9%  Similarity=0.043  Sum_probs=57.4

Q ss_pred             EEEEecCCchHHHHHHHHHHHc----CCEEEEEeC--CHHHHHHHHHhcCCC-----e---------eEe------cCCC
Q 028523           21 YVFVSAASGAVGQLVGQFAKLV----GCYVVGSAG--SKDKVDLLKNKFGFD-----E---------AFN------YKEE   74 (208)
Q Consensus        21 ~vli~ga~g~vG~~a~qla~~~----g~~v~~~~~--s~~~~~~~~~~~g~~-----~---------v~~------~~~~   74 (208)
                      +|.|.| -|-+|.++.+.+...    ..+|+++-.  +.+.+.++. ++.-.     .         +++      +++.
T Consensus         3 kigING-fGRIGR~v~R~~~~~~~~~~~~vvaINd~~~~~~~ayLl-kyDS~hG~~~~~v~~~~~~l~i~g~~i~i~~~~   80 (173)
T d1obfo1           3 RVAING-YGRIGRNILRAHYEGGKSHDIEIVAINDLGDPKTNAHLT-RYDTAHGKFPGTVSVNGSYMVVNGDKIRVDANR   80 (173)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHHTTSCSSEEEEEEECSSCHHHHHHHH-HEETTTEECSSCEEEETTEEEETTEEEEEECCS
T ss_pred             EEEEEC-CcHHHHHHHHHHHhCCCCCCeEEEEEcCCCChHHHHHhh-cccccCCCcCceEEeccceEEECCEEEEEEecC
Confidence            478888 699999998876532    246666663  344455555 33110     0         010      0111


Q ss_pred             ccHHHHHHhHCCC--CccEEEeCCC-chhHHHHHHhhccCCEEEEEeccc
Q 028523           75 PDLDAALKRYFPE--GINIYFENVG-GKMLDAVLLNMRIQGRITLCGMIS  121 (208)
Q Consensus        75 ~~~~~~~~~~~~~--~~d~v~d~~g-~~~~~~~~~~l~~~G~~v~~g~~~  121 (208)
                       +    ..++-..  ++|+|+||+| ....+.+...|..|-.-|.+..+.
T Consensus        81 -~----p~~i~W~~~gvDiViEcTG~f~~~~~a~~hl~~GakkViiSAP~  125 (173)
T d1obfo1          81 -N----PAQLPWGALKVDVVLECTGFFTTKEKAGAHIKGGAKKVIISAPG  125 (173)
T ss_dssp             -C----GGGSCTTTTTCSEEEECSSSCCSHHHHHHHHHHTCSEEEESSCC
T ss_pred             -C----HHHCcccccccceEEEecccccCHHHHHHHhccCCcceEEecCC
Confidence             1    1122222  7999999999 577788888998887777776654

>d1wdka3 c.2.1.6 (A:311-496) Fatty oxidation complex alpha subunit, middle domain {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Fatty oxidation complex alpha subunit, middle domain
species: Pseudomonas fragi [TaxId: 296]

Probab=93.46  E-value=0.069  Score=35.33  Aligned_cols=40  Identities=13%  Similarity=0.045  Sum_probs=33.9

Q ss_pred             CEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH
Q 028523           20 EYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLK   60 (208)
Q Consensus        20 ~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~   60 (208)
                      ++|.|.|+ |.+|...+.++...|.+|++.+++++..+.+.
T Consensus         5 ~~vaViGa-G~mG~~iA~~~a~~G~~V~l~D~~~~~l~~~~   44 (186)
T d1wdka3           5 KQAAVLGA-GIMGGGIAYQSASKGTPILMKDINEHGIEQGL   44 (186)
T ss_dssp             SSEEEECC-HHHHHHHHHHHHHTTCCEEEECSSHHHHHHHH
T ss_pred             CEEEEECc-CHHHHHHHHHHHhCCCeEEEEECCHHHHhhhh
Confidence            46889996 99999988888888999999999988766544

>d1jw9b_ c.111.1.1 (B:) Molybdenum cofactor biosynthesis protein MoeB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Molybdenum cofactor biosynthesis protein MoeB
domain: Molybdenum cofactor biosynthesis protein MoeB
species: Escherichia coli [TaxId: 562]

Probab=93.41  E-value=0.2  Score=34.46  Aligned_cols=32  Identities=16%  Similarity=0.178  Sum_probs=27.3

Q ss_pred             CCEEEEecCCchHHHHHHHHHHHcCC-EEEEEeC
Q 028523           19 GEYVFVSAASGAVGQLVGQFAKLVGC-YVVGSAG   51 (208)
Q Consensus        19 g~~vli~ga~g~vG~~a~qla~~~g~-~v~~~~~   51 (208)
                      +.+|+|.|+ |++|-.+++.+...|. +++.++.
T Consensus        30 ~~~VliiG~-GglGs~va~~La~~Gvg~i~lvD~   62 (247)
T d1jw9b_          30 DSRVLIVGL-GGLGCAASQYLASAGVGNLTLLDF   62 (247)
T ss_dssp             HCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECC
T ss_pred             CCCEEEECC-CHHHHHHHHHHHHcCCCeEEEECC
Confidence            468999995 9999999999999999 7777663

>d1hwxa1 c.2.1.7 (A:209-501) Glutamate dehydrogenase {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Cow (Bos taurus) [TaxId: 9913]

Probab=93.40  E-value=0.062  Score=38.22  Aligned_cols=34  Identities=21%  Similarity=0.193  Sum_probs=30.5

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCC
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGS   52 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s   52 (208)
                      +|.+|.|.| .|.||..+++.+...|++|++++.+
T Consensus        35 ~gktvaIqG-fGnVG~~~A~~L~e~Gakvv~vsD~   68 (293)
T d1hwxa1          35 GDKTFAVQG-FGNVGLHSMRYLHRFGAKCVAVGES   68 (293)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEEET
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEEcc
Confidence            578999999 6999999999999999999988743

>d1eq2a_ c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimerase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: ADP-L-glycero-D-mannoheptose 6-epimerase
species: Escherichia coli [TaxId: 562]

Probab=93.39  E-value=0.19  Score=35.22  Aligned_cols=72  Identities=11%  Similarity=0.102  Sum_probs=41.2

Q ss_pred             EEEecCCchHHHHHHHHHHHcCC-EEEEEe--CCHHHHHHHHHhcCCCeeEecCCCccHHHHHHhHCCC-CccEEEeCCC
Q 028523           22 VFVSAASGAVGQLVGQFAKLVGC-YVVGSA--GSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPE-GINIYFENVG   97 (208)
Q Consensus        22 vli~ga~g~vG~~a~qla~~~g~-~v~~~~--~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~-~~d~v~d~~g   97 (208)
                      |||+||+|-+|..++..+...|. +|++++  .+..+..... ++......+..   +....+.....- .++.++.+.+
T Consensus         2 ILITGgsGfIGs~lv~~L~~~g~~~V~~~d~~~~~~~~~~~~-~~~~~~~~~~~---~~~~~~~~~~~~~~~~~i~~~aa   77 (307)
T d1eq2a_           2 IIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKFVNLV-DLNIADYMDKE---DFLIQIMAGEEFGDVEAIFHEGA   77 (307)
T ss_dssp             EEEETTTSHHHHHHHHHHHTTTCCCEEEEECCSSGGGGHHHH-TSCCSEEEEHH---HHHHHHHTTCCCSSCCEEEECCS
T ss_pred             EEEecCccHHHHHHHHHHHhCCCCeEEEEECCCCcchhhccc-ccchhhhccch---HHHHHHhhhhcccchhhhhhhcc
Confidence            89999999999999888877797 677764  2222333333 34332333221   222222222222 5777876653

>d2ifta1 c.66.1.46 (A:11-193) Putative methylase HI0767 {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: YhhF-like
domain: Putative methylase HI0767
species: Haemophilus influenzae [TaxId: 727]

Probab=93.11  E-value=0.13  Score=33.89  Aligned_cols=93  Identities=13%  Similarity=0.015  Sum_probs=53.4

Q ss_pred             CCCEEE-EecCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHH---hcCCCe-eEecCCCccHHHHHHhHCCC-Ccc
Q 028523           18 QGEYVF-VSAASGAVGQLVGQFAKLVGC-YVVGSAGSKDKVDLLKN---KFGFDE-AFNYKEEPDLDAALKRYFPE-GIN   90 (208)
Q Consensus        18 ~g~~vl-i~ga~g~vG~~a~qla~~~g~-~v~~~~~s~~~~~~~~~---~~g~~~-v~~~~~~~~~~~~~~~~~~~-~~d   90 (208)
                      .+.++| ++.|||.+|+.|+    +.|+ +|+.++.+.+..+.+++   .++... ....... +..+.++..... .+|
T Consensus        43 ~~~~vLDlFaGsG~~glEal----SRGA~~v~fVE~~~~a~~~ik~Ni~~l~~~~~~~~~~~~-d~~~~l~~~~~~~~fD  117 (183)
T d2ifta1          43 HQSECLDGFAGSGSLGFEAL----SRQAKKVTFLELDKTVANQLKKNLQTLKCSSEQAEVINQ-SSLDFLKQPQNQPHFD  117 (183)
T ss_dssp             TTCEEEETTCTTCHHHHHHH----HTTCSEEEEECSCHHHHHHHHHHHHHTTCCTTTEEEECS-CHHHHTTSCCSSCCEE
T ss_pred             ccceEeecccCccceeeeee----eecceeeEEeecccchhhhHhhHHhhhcccccccccccc-cccccccccccCCccc
Confidence            445565 6778888887665    6788 99999988887766654   355421 1111112 444444433333 699


Q ss_pred             EEEeCCC--chhHHHHHHh------hccCCEEE
Q 028523           91 IYFENVG--GKMLDAVLLN------MRIQGRIT  115 (208)
Q Consensus        91 ~v~d~~g--~~~~~~~~~~------l~~~G~~v  115 (208)
                      +||---+  .......+..      |+++|.++
T Consensus       118 lIFlDPPY~~~~~~~~l~~l~~~~~L~~~~lii  150 (183)
T d2ifta1         118 VVFLDPPFHFNLAEQAISLLCENNWLKPNALIY  150 (183)
T ss_dssp             EEEECCCSSSCHHHHHHHHHHHTTCEEEEEEEE
T ss_pred             EEEechhHhhhhHHHHHHHHHHhCCcCCCcEEE
Confidence            9975333  2334444443      45555544

>d1lssa_ c.2.1.9 (A:) Ktn Mja218 {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn Mja218
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=92.98  E-value=0.28  Score=30.08  Aligned_cols=60  Identities=13%  Similarity=0.209  Sum_probs=45.1

Q ss_pred             HhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHhcCCCeeEecC
Q 028523           12 EVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGC-YVVGSAGSKDKVDLLKNKFGFDEAFNYK   72 (208)
Q Consensus        12 ~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g~-~v~~~~~s~~~~~~~~~~~g~~~v~~~~   72 (208)
                      +.+++..-+.+++.-..-..-+.++++++.+|. ++++.+.+++..+.++ ++|++.++++.
T Consensus        59 ~~~~i~~a~~vv~~t~~d~~N~~~~~~~k~~~~~~iI~~~~~~~~~~~l~-~~G~d~vi~p~  119 (132)
T d1lssa_          59 EDAGIEDADMYIAVTGKEEVNLMSSLLAKSYGINKTIARISEIEYKDVFE-RLGVDVVVSPE  119 (132)
T ss_dssp             HHTTTTTCSEEEECCSCHHHHHHHHHHHHHTTCCCEEEECSSTTHHHHHH-HTTCSEEECHH
T ss_pred             hhcChhhhhhhcccCCcHHHHHHHHHHHHHcCCceEEEEecCHHHHHHHH-HCCCCEEECHH
Confidence            345677777777654455666778888888888 7888887877888888 89998888643

>d1q1ra1 c.3.1.5 (A:2-114,A:248-319) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Putidaredoxin reductase
species: Pseudomonas putida [TaxId: 303]

Probab=92.95  E-value=0.045  Score=35.69  Aligned_cols=32  Identities=16%  Similarity=0.033  Sum_probs=26.5

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEe
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSA   50 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~   50 (208)
                      ++++|+|.|| |.+|..++..++.+|.++.++.
T Consensus         2 ~~~~VvIIGg-G~~G~e~A~~l~~~g~~v~v~~   33 (185)
T d1q1ra1           2 ANDNVVIVGT-GLAGVEVAFGLRASGWEGNIRL   33 (185)
T ss_dssp             CSCEEEEECC-SHHHHHHHHHHHHTTCCSEEEE
T ss_pred             CCCCEEEECC-cHHHHHHHHHHHHcCCceEEEE
Confidence            5789999996 9999999999999998654443

>d3c96a1 c.3.1.2 (A:4-182,A:294-402) Monooxygenase PhzS {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Monooxygenase PhzS
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=92.95  E-value=0.063  Score=37.32  Aligned_cols=32  Identities=19%  Similarity=0.130  Sum_probs=27.7

Q ss_pred             EEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCH
Q 028523           21 YVFVSAASGAVGQLVGQFAKLVGC-YVVGSAGSK   53 (208)
Q Consensus        21 ~vli~ga~g~vG~~a~qla~~~g~-~v~~~~~s~   53 (208)
                      .|+|.|| |..|++++.+++..|. +|.+..+++
T Consensus         3 ~V~IvGa-G~aGl~~A~~L~~~Gi~~V~V~Er~~   35 (288)
T d3c96a1           3 DILIAGA-GIGGLSCALALHQAGIGKVTLLESSS   35 (288)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCSEEEEEESSS
T ss_pred             EEEEECc-CHHHHHHHHHHHhCCCCeEEEEeCCC
Confidence            5899996 9999999999999997 888877654

>d1b0aa1 c.2.1.7 (A:123-288) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Escherichia coli [TaxId: 562]

Probab=92.90  E-value=0.39  Score=30.87  Aligned_cols=79  Identities=16%  Similarity=0.117  Sum_probs=55.6

Q ss_pred             CCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHHHHhHCCCCccEEEeC
Q 028523           16 PKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFEN   95 (208)
Q Consensus        16 ~~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~d~v~d~   95 (208)
                      --.|.+|+|.|.+.-+|.-+..++...|++|+.+.....                     +..+.+++     .|+++-+
T Consensus        34 ~l~GK~v~VIGrS~~VG~Pla~lL~~~gatVt~~h~~t~---------------------~l~~~~~~-----ADivI~a   87 (166)
T d1b0aa1          34 DTFGLNAVVIGASNIVGRPMSMELLLAGCTTTVTHRFTK---------------------NLRHHVEN-----ADLLIVA   87 (166)
T ss_dssp             CCTTCEEEEECCCTTTHHHHHHHHHTTTCEEEEECSSCS---------------------CHHHHHHH-----CSEEEEC
T ss_pred             ccccceEEEEeccccccHHHHHHHHHhhccccccccccc---------------------hhHHHHhh-----hhHhhhh
Confidence            357999999999999999999999999999877653221                     33333332     6888888


Q ss_pred             CCchhHHHHHHhhccCCEEEEEeccc
Q 028523           96 VGGKMLDAVLLNMRIQGRITLCGMIS  121 (208)
Q Consensus        96 ~g~~~~~~~~~~l~~~G~~v~~g~~~  121 (208)
                      +|.+.+- --+.++++-.++.+|...
T Consensus        88 ~G~p~~i-~~~~vk~g~vvIDvGi~~  112 (166)
T d1b0aa1          88 VGKPGFI-PGDWIKEGAIVIDVGINR  112 (166)
T ss_dssp             SCCTTCB-CTTTSCTTCEEEECCCEE
T ss_pred             ccCcccc-cccccCCCcEEEecCcee
Confidence            8854221 134667888888887643

>d1tlta1 c.2.1.3 (A:5-127,A:268-308) Virulence factor MviM {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Virulence factor MviM
species: Escherichia coli [TaxId: 562]

Probab=92.87  E-value=0.64  Score=29.49  Aligned_cols=86  Identities=10%  Similarity=0.032  Sum_probs=53.9

Q ss_pred             EEEEecCCchHHHH-HHHHHHHc-CCEEEEEe-CCHHHHHHHHHhcCCCeeEecCCCccHHHHHHhHCCCCccEEEeCCC
Q 028523           21 YVFVSAASGAVGQL-VGQFAKLV-GCYVVGSA-GSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVG   97 (208)
Q Consensus        21 ~vli~ga~g~vG~~-a~qla~~~-g~~v~~~~-~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~d~v~d~~g   97 (208)
                      +|.|.| +|.+|.- .+...+.. +.++++++ +++++.+.+.++++... +   +  ++.+.+    . .+|+|+.++.
T Consensus         3 ri~iIG-~G~~g~~~~~~~l~~~~~~~i~~v~d~~~~~~~~~~~~~~~~~-~---~--~~~~l~----~-~~D~V~I~tp   70 (164)
T d1tlta1           3 RIGVVG-LGGIAQKAWLPVLAAASDWTLQGAWSPTRAKALPICESWRIPY-A---D--SLSSLA----A-SCDAVFVHSS   70 (164)
T ss_dssp             EEEEEC-CSTHHHHTHHHHHHSCSSEEEEEEECSSCTTHHHHHHHHTCCB-C---S--SHHHHH----T-TCSEEEECSC
T ss_pred             EEEEEc-CCHHHHHHHHHHHHhCCCcEEEEEEechhHhhhhhhhcccccc-c---c--cchhhh----h-hccccccccc
Confidence            478889 5888864 56666554 66877665 44555555554777642 1   1  333322    1 4899999988


Q ss_pred             c-hhHHHHHHhhccCCEEEEEec
Q 028523           98 G-KMLDAVLLNMRIQGRITLCGM  119 (208)
Q Consensus        98 ~-~~~~~~~~~l~~~G~~v~~g~  119 (208)
                      . .....+..+|..|-. +++.-
T Consensus        71 ~~~h~~~~~~al~~gk~-V~~EK   92 (164)
T d1tlta1          71 TASHFDVVSTLLNAGVH-VCVDK   92 (164)
T ss_dssp             TTHHHHHHHHHHHTTCE-EEEES
T ss_pred             chhccccccccccccce-eeccc
Confidence            4 567777777777655 44543

>d2esra1 c.66.1.46 (A:28-179) Putative methyltransferase SPy1538 {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: YhhF-like
domain: Putative methyltransferase SPy1538
species: Streptococcus pyogenes [TaxId: 1314]

Probab=92.85  E-value=0.37  Score=30.39  Aligned_cols=94  Identities=13%  Similarity=0.114  Sum_probs=51.9

Q ss_pred             CCCCEEEEe-cCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHH---hcCCCeeEecCCCccHHHHHHhHCCCCccE
Q 028523           17 KQGEYVFVS-AASGAVGQLVGQFAKLVGC-YVVGSAGSKDKVDLLKN---KFGFDEAFNYKEEPDLDAALKRYFPEGINI   91 (208)
Q Consensus        17 ~~g~~vli~-ga~g~vG~~a~qla~~~g~-~v~~~~~s~~~~~~~~~---~~g~~~v~~~~~~~~~~~~~~~~~~~~~d~   91 (208)
                      -.|.+||=. .|+|.+|+.+    ...|+ +|+.++.+++..+.+++   .++...-+..-.. +....+.. ..+.+|+
T Consensus        13 ~~g~~vlDl~~GtG~~~iea----~~rga~~v~~ve~~~~a~~~~~~n~~~~~~~~~~~ii~~-D~~~~l~~-~~~~fDi   86 (152)
T d2esra1          13 FNGGRVLDLFAGSGGLAIEA----VSRGMSAAVLVEKNRKAQAIIQDNIIMTKAENRFTLLKM-EAERAIDC-LTGRFDL   86 (152)
T ss_dssp             CCSCEEEEETCTTCHHHHHH----HHTTCCEEEEECCCHHHHHHHHHHHHTTTCGGGEEEECS-CHHHHHHH-BCSCEEE
T ss_pred             CCCCeEEEcCCccCHHHHHH----HHhCcceeeeehhchhhhhhhhhhhhhcccccchhhhcc-cccccccc-cccccce
Confidence            367788744 4555555533    34677 99999998887666553   4455331111122 55555543 3447999


Q ss_pred             EEeCCC--chhHHHHHH------hhccCCEEEE
Q 028523           92 YFENVG--GKMLDAVLL------NMRIQGRITL  116 (208)
Q Consensus        92 v~d~~g--~~~~~~~~~------~l~~~G~~v~  116 (208)
                      ||--.+  .......++      .|+++|.++.
T Consensus        87 If~DPPy~~~~~~~~l~~i~~~~~L~~~g~iii  119 (152)
T d2esra1          87 VFLDPPYAKETIVATIEALAAKNLLSEQVMVVC  119 (152)
T ss_dssp             EEECCSSHHHHHHHHHHHHHHTTCEEEEEEEEE
T ss_pred             eEechhhccchHHHHHHHHHHCCCcCCCeEEEE
Confidence            985332  122222222      4667777654

>d1pgja2 c.2.1.6 (A:1-178) 6-phosphogluconate dehydrogenase {Trypanosoma brucei [TaxId: 5691]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Trypanosoma brucei [TaxId: 5691]

Probab=92.84  E-value=0.46  Score=30.70  Aligned_cols=40  Identities=18%  Similarity=0.047  Sum_probs=34.4

Q ss_pred             EEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHh
Q 028523           22 VFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNK   62 (208)
Q Consensus        22 vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~   62 (208)
                      |-|.| .|.+|...+.-+...|.+|++.++++++.+.+.++
T Consensus         4 IGvIG-lG~MG~~ma~~L~~~G~~V~~~dr~~~~~~~l~~~   43 (178)
T d1pgja2           4 VGVVG-LGVMGANLALNIAEKGFKVAVFNRTYSKSEEFMKA   43 (178)
T ss_dssp             EEEEC-CSHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHH
T ss_pred             EEEEe-ehHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHc
Confidence            67888 69999988888888899999999999999888733

>d1fcda1 c.3.1.5 (A:1-114,A:256-327) Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit {Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit
species: Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]

Probab=92.82  E-value=0.091  Score=33.85  Aligned_cols=35  Identities=23%  Similarity=0.242  Sum_probs=28.8

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCC--EEEEEeCCH
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGC--YVVGSAGSK   53 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~--~v~~~~~s~   53 (208)
                      .|++|+|.|| |.+|+.+++.++..+.  +|+++.+.+
T Consensus         1 ~gkrivIvGg-G~~G~e~A~~l~~~~~~~~Vtlie~~~   37 (186)
T d1fcda1           1 AGRKVVVVGG-GTGGATAAKYIKLADPSIEVTLIEPNT   37 (186)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHHCTTSEEEEECSCS
T ss_pred             CCCcEEEECc-cHHHHHHHHHHHHcCCCCcEEEEECCC
Confidence            4789999996 9999999988888774  788877554

>d1c0pa1 c.4.1.2 (A:999-1193,A:1289-1361) D-aminoacid oxidase, N-terminal domain {Rhodotorula gracilis [TaxId: 5286]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: D-aminoacid oxidase, N-terminal domain
domain: D-aminoacid oxidase, N-terminal domain
species: Rhodotorula gracilis [TaxId: 5286]

Probab=92.77  E-value=0.12  Score=35.42  Aligned_cols=35  Identities=20%  Similarity=0.122  Sum_probs=30.0

Q ss_pred             CCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCC
Q 028523           17 KQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGS   52 (208)
Q Consensus        17 ~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s   52 (208)
                      +.-.+|+|.|| |..|++++..+...|.+|.++.+.
T Consensus         4 ~~~~kVvVIGa-GiaGl~~A~~L~~~G~~V~vier~   38 (268)
T d1c0pa1           4 HSQKRVVVLGS-GVIGLSSALILARKGYSVHILARD   38 (268)
T ss_dssp             CCSCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESS
T ss_pred             CCCCcEEEECc-cHHHHHHHHHHHHCCCCEEEEeCC
Confidence            34457999996 999999999999999999999864

>d1g6q1_ c.66.1.6 (1:) Arginine methyltransferase, HMT1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arginine methyltransferase
domain: Arginine methyltransferase, HMT1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=92.74  E-value=0.072  Score=38.57  Aligned_cols=92  Identities=22%  Similarity=0.131  Sum_probs=49.9

Q ss_pred             cCCCCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHH---hcCCCe---eEecCCCccHHHHHHhHCC
Q 028523           14 CSPKQGEYVFVSAASGAVGQLVGQFAKLVGC-YVVGSAGSKDKVDLLKN---KFGFDE---AFNYKEEPDLDAALKRYFP   86 (208)
Q Consensus        14 ~~~~~g~~vli~ga~g~vG~~a~qla~~~g~-~v~~~~~s~~~~~~~~~---~~g~~~---v~~~~~~~~~~~~~~~~~~   86 (208)
                      ....+|++||-.|+  |.|..+..+++ .|+ +|++++.++ ....+++   +.+...   ++...-. ++     ....
T Consensus        34 ~~~~~~~~VLDlGc--GtG~ls~~aa~-~Ga~~V~avd~s~-~~~~a~~~~~~~~~~~~i~~i~~~~~-~l-----~~~~  103 (328)
T d1g6q1_          34 KDLFKDKIVLDVGC--GTGILSMFAAK-HGAKHVIGVDMSS-IIEMAKELVELNGFSDKITLLRGKLE-DV-----HLPF  103 (328)
T ss_dssp             HHHHTTCEEEEETC--TTSHHHHHHHH-TCCSEEEEEESST-HHHHHHHHHHHTTCTTTEEEEESCTT-TS-----CCSS
T ss_pred             cccCCcCEEEEeCC--CCCHHHHHHHH-hCCCEEEEEeCCH-HHHHHHHHHHHhCccccceEEEeehh-hc-----cCcc
Confidence            34568999999984  34655554444 677 899999775 3333321   334322   2222111 11     1112


Q ss_pred             CCccEEEeCCC-----c-h----hHHHHHHhhccCCEEE
Q 028523           87 EGINIYFENVG-----G-K----MLDAVLLNMRIQGRIT  115 (208)
Q Consensus        87 ~~~d~v~d~~g-----~-~----~~~~~~~~l~~~G~~v  115 (208)
                      +.+|+|+...-     . .    .+...-+.|+|||.++
T Consensus       104 ~~~D~i~se~~~~~~~~e~~~~~~~~a~~r~LkpgG~ii  142 (328)
T d1g6q1_         104 PKVDIIISEWMGYFLLYESMMDTVLYARDHYLVEGGLIF  142 (328)
T ss_dssp             SCEEEEEECCCBTTBSTTCCHHHHHHHHHHHEEEEEEEE
T ss_pred             cceeEEEEEecceeeccchhHHHHHHHHHhccCCCeEEE
Confidence            37999875321     1 1    2334447899999874

>d1vlma_ c.66.1.41 (A:) Possible histamine N-methyltransferase TM1293 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: UbiE/COQ5-like
domain: Possible histamine N-methyltransferase TM1293
species: Thermotoga maritima [TaxId: 2336]

Probab=92.72  E-value=0.11  Score=34.56  Aligned_cols=90  Identities=11%  Similarity=0.082  Sum_probs=56.9

Q ss_pred             CCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHHHHhHCCCCccEEEe
Q 028523           15 SPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFE   94 (208)
Q Consensus        15 ~~~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~d~v~d   94 (208)
                      .+.++++||=.|+  |.|..+..+     .++++++.|+...+.++ +-+.. ++..... ++     ...++.||+|+.
T Consensus        33 ~~~~~~~vLDiGc--G~G~~~~~~-----~~~~giD~s~~~~~~a~-~~~~~-~~~~d~~-~l-----~~~~~~fD~I~~   97 (208)
T d1vlma_          33 CLLPEGRGVEIGV--GTGRFAVPL-----KIKIGVEPSERMAEIAR-KRGVF-VLKGTAE-NL-----PLKDESFDFALM   97 (208)
T ss_dssp             HHCCSSCEEEETC--TTSTTHHHH-----TCCEEEESCHHHHHHHH-HTTCE-EEECBTT-BC-----CSCTTCEEEEEE
T ss_pred             hhCCCCeEEEECC--CCccccccc-----ceEEEEeCChhhccccc-ccccc-ccccccc-cc-----cccccccccccc
Confidence            3456778998885  345555444     35789999999999888 54442 2222111 11     011236999976


Q ss_pred             CCC-------chhHHHHHHhhccCCEEEEEec
Q 028523           95 NVG-------GKMLDAVLLNMRIQGRITLCGM  119 (208)
Q Consensus        95 ~~g-------~~~~~~~~~~l~~~G~~v~~g~  119 (208)
                      ...       ...+..+.+.|+|||.++....
T Consensus        98 ~~~l~h~~d~~~~l~~~~~~L~pgG~l~i~~~  129 (208)
T d1vlma_          98 VTTICFVDDPERALKEAYRILKKGGYLIVGIV  129 (208)
T ss_dssp             ESCGGGSSCHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred             ccccccccccccchhhhhhcCCCCceEEEEec
Confidence            432       1257889999999999877643

>d1u8fo1 c.2.1.3 (O:3-151,O:316-335) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Human(Homo sapiens), liver isoform [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Human(Homo sapiens), liver isoform [TaxId: 9606]

Probab=92.70  E-value=0.74  Score=29.65  Aligned_cols=99  Identities=13%  Similarity=0.092  Sum_probs=59.2

Q ss_pred             EEEEecCCchHHHHHHHHHHHc-CCEEEEEeC---CHHHHHHHHHhcCCC-----e--eE-----ecCCCc-cH--HHHH
Q 028523           21 YVFVSAASGAVGQLVGQFAKLV-GCYVVGSAG---SKDKVDLLKNKFGFD-----E--AF-----NYKEEP-DL--DAAL   81 (208)
Q Consensus        21 ~vli~ga~g~vG~~a~qla~~~-g~~v~~~~~---s~~~~~~~~~~~g~~-----~--v~-----~~~~~~-~~--~~~~   81 (208)
                      +|.|.| -|-+|.++.+.+... ..+++++-.   +.+...++. ++...     .  .+     ...... .+  ....
T Consensus         3 kIgING-FGRIGR~v~R~~~~~~~~~ivaINd~~~~~~~~ayLl-kyDS~hG~~~~~v~~~~~~l~i~~~~I~~~~~~~p   80 (169)
T d1u8fo1           3 KVGVNG-FGRIGRLVTRAAFNSGKVDIVAINDPFIDLNYMVYMF-QYDSTHGKFHGTVKAENGKLVINGNPITIFQERDP   80 (169)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHHHCSSEEEEEECSSSCHHHHHHHH-HCCTTTCSCSSCEEEETTEEEETTEEEEEECCSSG
T ss_pred             EEEEEC-CcHHHHHHHHHHHHCCCcEEEEecCCCccHHHHHHHH-hhccccCCcCCeEEEECCEEEECCEEEEEEECCCh
Confidence            578988 699999999877655 468877754   345566666 43210     0  00     000000 00  0001


Q ss_pred             HhHCCC--CccEEEeCCC-chhHHHHHHhhccCCEEEEEeccc
Q 028523           82 KRYFPE--GINIYFENVG-GKMLDAVLLNMRIQGRITLCGMIS  121 (208)
Q Consensus        82 ~~~~~~--~~d~v~d~~g-~~~~~~~~~~l~~~G~~v~~g~~~  121 (208)
                      .++-..  ++|+|+||+| ....+.+...+..|-.-|.+..+.
T Consensus        81 ~~i~W~~~~vDiViEcTG~f~~~~~~~~hl~~gakkViiSaP~  123 (169)
T d1u8fo1          81 SKIKWGDAGAEYVVESTGVFTTMEKAGAHLQGGAKRVIISAPS  123 (169)
T ss_dssp             GGCCTTTTTCCEEEECSSSCCSHHHHGGGGGGTCSEEEESSCC
T ss_pred             hhCCccccCCCEEEEecceeccHHHHHHHHhcCCceEeecccc
Confidence            222222  7999999999 467778888888887667776544

>d1fl2a1 c.3.1.5 (A:212-325,A:452-521) Alkyl hydroperoxide reductase subunit F (AhpF), C-terminal domains {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Alkyl hydroperoxide reductase subunit F (AhpF), C-terminal domains
species: Escherichia coli [TaxId: 562]

Probab=92.61  E-value=0.065  Score=34.92  Aligned_cols=29  Identities=14%  Similarity=0.188  Sum_probs=26.2

Q ss_pred             EEEecCCchHHHHHHHHHHHcCCEEEEEeC
Q 028523           22 VFVSAASGAVGQLVGQFAKLVGCYVVGSAG   51 (208)
Q Consensus        22 vli~ga~g~vG~~a~qla~~~g~~v~~~~~   51 (208)
                      |+|.|| |+.|+.++..+...|.+|.++.+
T Consensus         4 ViIIGg-GpaGl~AAi~aar~G~~v~iie~   32 (184)
T d1fl2a1           4 VLIVGS-GPAGAAAAIYSARKGIRTGLMGE   32 (184)
T ss_dssp             EEEECC-SHHHHHHHHHHHTTTCCEEEECS
T ss_pred             EEEECc-CHHHHHHHHHHHHcCCeEEEEEE
Confidence            788896 99999999999999999998874

>d1mb4a1 c.2.1.3 (A:1-132,A:355-369) Aspartate beta-semialdehyde dehydrogenase {Vibrio cholerae [TaxId: 666]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Aspartate beta-semialdehyde dehydrogenase
species: Vibrio cholerae [TaxId: 666]

Probab=92.42  E-value=0.081  Score=33.57  Aligned_cols=90  Identities=18%  Similarity=0.042  Sum_probs=46.6

Q ss_pred             EEEEecCCchHHHHHHHHHHH-c---CCEEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHHHHhHCCCCccEEEeCC
Q 028523           21 YVFVSAASGAVGQLVGQFAKL-V---GCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENV   96 (208)
Q Consensus        21 ~vli~ga~g~vG~~a~qla~~-~---g~~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~d~v~d~~   96 (208)
                      +|.|.||+|-+|+-.++++.. .   ..++.....+...-+. . .++.......... +. +.+     ..+|++|-|+
T Consensus         2 KVaIiGATGyvG~eLi~lLl~~~~~p~~~i~~~ss~~~~gk~-~-~~~~~~~~~~~~~-~~-~~~-----~~~DvvF~al   72 (147)
T d1mb4a1           2 RVGLVGWRGMVGSVLMQRMVEERDFDLIEPVFFSTSQIGVPA-P-NFGKDAGMLHDAF-DI-ESL-----KQLDAVITCQ   72 (147)
T ss_dssp             EEEEESCSSHHHHHHHHHHHHTTGGGGSEEEEEESSCCSSBC-C-CSSSCCCBCEETT-CH-HHH-----TTCSEEEECS
T ss_pred             EEEEECCccHHHHHHHHHHHhcCCCCceEEEEeccccccccc-c-ccCCcceeeeccc-ch-hhh-----ccccEEEEec
Confidence            588999999999999986542 2   3466655534221111 1 1221111111111 11 111     1489999999


Q ss_pred             CchhHHHHHHh-hccCC--EEEEEec
Q 028523           97 GGKMLDAVLLN-MRIQG--RITLCGM  119 (208)
Q Consensus        97 g~~~~~~~~~~-l~~~G--~~v~~g~  119 (208)
                      +...-...... +..+-  .++..+.
T Consensus        73 p~~~s~~~~~~l~~~g~~~~VIDlSs   98 (147)
T d1mb4a1          73 GGSYTEKVYPALRQAGWKGYWIDAAS   98 (147)
T ss_dssp             CHHHHHHHHHHHHHTTCCSEEEESSS
T ss_pred             CchHHHHHhHHHHHcCCceEEEeCCc
Confidence            96544444444 44442  3555443

>d2bhsa1 c.79.1.1 (A:2-293) O-acetylserine sulfhydrylase (Cysteine synthase) {Escherichia coli, isoform B (CysM) [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: O-acetylserine sulfhydrylase (Cysteine synthase)
species: Escherichia coli, isoform B (CysM) [TaxId: 562]

Probab=92.39  E-value=1.2  Score=31.21  Aligned_cols=104  Identities=15%  Similarity=0.177  Sum_probs=62.7

Q ss_pred             cCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeC---CHHHHHHHHHhcCCCeeEecCCC----------------
Q 028523           14 CSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAG---SKDKVDLLKNKFGFDEAFNYKEE----------------   74 (208)
Q Consensus        14 ~~~~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~---s~~~~~~~~~~~g~~~v~~~~~~----------------   74 (208)
                      +.+.++..| |...+|.-|++++..|+.+|.+++++..   ++.+.+.++ .+|+.-++...+.                
T Consensus        55 g~~~~~~~v-v~aSsGN~g~a~A~~a~~~G~~~~i~~p~~~~~~k~~~~~-~~GA~v~~v~~~~~~~~a~~~~~~~~~~~  132 (292)
T d2bhsa1          55 GEIKPGDVL-IEATSGNTGIALAMIAALKGYRMKLLMPDNMSQERRAAMR-AYGAELILVTKEQGMEGARDLALEMANRG  132 (292)
T ss_dssp             TSCCTTSEE-EEECCSHHHHHHHHHHHHHTCEEEEEEESCCCHHHHHHHH-HTTCEEEEECTTTHHHHHHHHHHHHHHHT
T ss_pred             CCcCCCcee-eeecccchhHHHHHHHHhcCcceEeeeccCchhhhhHHHH-HhCCCcceeecccchHHHHHHHhhccccc
Confidence            445556654 5555799999999999999996555553   455667777 8887533211111                


Q ss_pred             -----------cc-------HHHHHHhHCCCCccEEEeCCC-chhH---HHHHHhhccCCEEEEEec
Q 028523           75 -----------PD-------LDAALKRYFPEGINIYFENVG-GKML---DAVLLNMRIQGRITLCGM  119 (208)
Q Consensus        75 -----------~~-------~~~~~~~~~~~~~d~v~d~~g-~~~~---~~~~~~l~~~G~~v~~g~  119 (208)
                                 ..       ...++.+..++.+|.++.++| +..+   ...++.+.+..+++.+..
T Consensus       133 ~~~~~~~~~~~~~~~~~~~~~a~Ei~~q~~~~~d~vv~~~G~Gg~~~G~~~~~k~~~~~~~i~~Vep  199 (292)
T d2bhsa1         133 EGKLLDQFNNPDNPYAHYTTTGPEIWQQTGGRITHFVSSMGTTGTITGVSRFMREQSKPVTIVGLQP  199 (292)
T ss_dssp             SSEECCTTTCTHHHHHHHHTHHHHHHHHTTTCCCEEEEECSSSHHHHHHHHHHHTSSSCCEEEEEEE
T ss_pred             cccccCCCchhcchhhHHHHHHHHhHHhcCCCCCcccccCCCccchhhhhhhhhhccCcceEEEecc
Confidence                       00       111222223346899999888 3443   345555666777766654

>d1dxla1 c.3.1.5 (A:4-152,A:276-347) Dihydrolipoamide dehydrogenase {Garden pea (Pisum sativum) [TaxId: 3888]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Garden pea (Pisum sativum) [TaxId: 3888]

Probab=92.11  E-value=0.081  Score=35.54  Aligned_cols=30  Identities=17%  Similarity=0.139  Sum_probs=26.7

Q ss_pred             EEEecCCchHHHHHHHHHHHcCCEEEEEeCC
Q 028523           22 VFVSAASGAVGQLVGQFAKLVGCYVVGSAGS   52 (208)
Q Consensus        22 vli~ga~g~vG~~a~qla~~~g~~v~~~~~s   52 (208)
                      |+|.|| |+.|+.++..+...|.+|+++...
T Consensus         6 vvVIGg-GpaGl~aA~~aa~~G~kV~vie~~   35 (221)
T d1dxla1           6 VVIIGG-GPGGYVAAIKAAQLGFKTTCIEKR   35 (221)
T ss_dssp             EEEECC-SHHHHHHHHHHHHHTCCEEEEECS
T ss_pred             EEEECC-CHHHHHHHHHHHHCCCcEEEEEec
Confidence            678896 999999999999999999999854

>d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase)
species: Escherichia coli [TaxId: 562]

Probab=92.11  E-value=0.05  Score=38.85  Aligned_cols=32  Identities=19%  Similarity=0.225  Sum_probs=27.6

Q ss_pred             CEEEEecCCchHHHHHHHHHHHcCCEEEEEeC
Q 028523           20 EYVFVSAASGAVGQLVGQFAKLVGCYVVGSAG   51 (208)
Q Consensus        20 ~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~   51 (208)
                      ++|||+||+|-+|...++.+...|..++++..
T Consensus         3 kkIlITG~tGfiG~~l~~~L~~~g~~vi~~~~   34 (315)
T d1e6ua_           3 QRVFIAGHRGMVGSAIRRQLEQRGDVELVLRT   34 (315)
T ss_dssp             EEEEEETTTSHHHHHHHHHHTTCTTEEEECCC
T ss_pred             CEEEEEcCCcHHHHHHHHHHHHCcCEEEEecC
Confidence            47999999999999999988888988777653

>d1b26a1 c.2.1.7 (A:179-412) Glutamate dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=92.10  E-value=0.25  Score=33.86  Aligned_cols=36  Identities=28%  Similarity=0.331  Sum_probs=29.6

Q ss_pred             CCCCCEEEEecCCchHHHHHHHHH-HHcCCEEEEEeCC
Q 028523           16 PKQGEYVFVSAASGAVGQLVGQFA-KLVGCYVVGSAGS   52 (208)
Q Consensus        16 ~~~g~~vli~ga~g~vG~~a~qla-~~~g~~v~~~~~s   52 (208)
                      --+|.+|.|.| .|.||..+++.+ +..|++|++++.+
T Consensus        28 ~l~g~~vaIqG-~GnVG~~~a~~L~~e~Ga~vv~vsd~   64 (234)
T d1b26a1          28 DPKKATVAVQG-FGNVGQFAALLISQELGSKVVAVSDS   64 (234)
T ss_dssp             CTTTCEEEEEC-CSHHHHHHHHHHHHHHCCEEEEEEET
T ss_pred             CcCCCEEEEEC-CCHHHHHHHHHHHHhcCCceEEeecC
Confidence            34688999998 699999999887 5689999988743

>d1hdgo1 c.2.1.3 (O:1-148,O:313-331) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Thermotoga maritima [TaxId: 2336]

Probab=92.09  E-value=0.44  Score=30.74  Aligned_cols=99  Identities=15%  Similarity=0.193  Sum_probs=56.4

Q ss_pred             EEEEecCCchHHHHHHHHHHHc---CCEEEEEeCC--HHHHHHHHHhc----CC-CeeEecCCC------cc--H--HHH
Q 028523           21 YVFVSAASGAVGQLVGQFAKLV---GCYVVGSAGS--KDKVDLLKNKF----GF-DEAFNYKEE------PD--L--DAA   80 (208)
Q Consensus        21 ~vli~ga~g~vG~~a~qla~~~---g~~v~~~~~s--~~~~~~~~~~~----g~-~~v~~~~~~------~~--~--~~~   80 (208)
                      +|.|.| -|-+|..+.+.+...   ..+|+.+-..  .+.+.++. ++    |. +.-+...+.      ..  +  ...
T Consensus         2 kIgING-fGRIGR~v~R~~~~~~~~~i~vvaINd~~~~e~~ayLl-kyDS~hG~~~~~v~~~~~~l~ing~~I~~~~~~~   79 (169)
T d1hdgo1           2 RVAING-FGRIGRLVYRIIYERKNPDIEVVAINDLTDTKTLAHLL-KYDSVHKKFPGKVEYTENSLIVDGKEIKVFAEPD   79 (169)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHHHTCTTCEEEEEECSSCHHHHHHHH-HCCTTTCCCSSCEEECSSEEEETTEEEEEECCSS
T ss_pred             EEEEEC-CChHHHHHHHHHHhccCCCEEEEEeccCccHHHHHHHH-hccccccccCceEEEECCEEEECCEEEEEEeCCC
Confidence            578998 699999999877543   3677776533  44555555 32    21 000000000      00  0  000


Q ss_pred             HHhHCCC--CccEEEeCCC-chhHHHHHHhhccCCEEEEEeccc
Q 028523           81 LKRYFPE--GINIYFENVG-GKMLDAVLLNMRIQGRITLCGMIS  121 (208)
Q Consensus        81 ~~~~~~~--~~d~v~d~~g-~~~~~~~~~~l~~~G~~v~~g~~~  121 (208)
                      ..++-.+  ++|+|+||+| ....+.+...+..|-.-|.+..+.
T Consensus        80 p~~i~W~~~gvD~ViEcTG~f~t~~~~~~hl~~GakkViiSAP~  123 (169)
T d1hdgo1          80 PSKLPWKDLGVDFVIESTGVFRNREKAELHLQAGAKKVIITAPA  123 (169)
T ss_dssp             GGGSCHHHHTCCEEEECSSSCCBHHHHTHHHHTTCSEEEESSCC
T ss_pred             hhhCCccccCCCEEEEecceeccccchhhhccCCCceEEEeccc
Confidence            0111111  7999999999 477788888888876556665543

>d2gqfa1 c.3.1.8 (A:1-194,A:343-401) Hypothetical protein HI0933 {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: HI0933 N-terminal domain-like
domain: Hypothetical protein HI0933
species: Haemophilus influenzae [TaxId: 727]

Probab=92.09  E-value=0.071  Score=36.88  Aligned_cols=32  Identities=22%  Similarity=0.193  Sum_probs=28.1

Q ss_pred             EEEecCCchHHHHHHHHHHHcCCEEEEEeCCHH
Q 028523           22 VFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKD   54 (208)
Q Consensus        22 vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~   54 (208)
                      |+|.|| |+.|++++-.+...|.+|.++.+++.
T Consensus         7 ViIIGa-G~aGl~aA~~la~~G~~V~vlEk~~~   38 (253)
T d2gqfa1           7 NIIIGA-GAAGLFCAAQLAKLGKSVTVFDNGKK   38 (253)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEECSSSS
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCcEEEEecCCC
Confidence            788896 99999998888888999999997754

>d2bi7a1 c.4.1.3 (A:2-247,A:317-384) UDP-galactopyranose mutase, N-terminal domain {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: UDP-galactopyranose mutase, N-terminal domain
domain: UDP-galactopyranose mutase, N-terminal domain
species: Klebsiella pneumoniae [TaxId: 573]

Probab=92.07  E-value=0.11  Score=37.36  Aligned_cols=34  Identities=18%  Similarity=0.211  Sum_probs=29.7

Q ss_pred             CCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCH
Q 028523           19 GEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSK   53 (208)
Q Consensus        19 g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~   53 (208)
                      ...|+|.|| |..|+.++..+...|.+|.+...++
T Consensus         2 ~KKI~IIGa-G~sGL~aA~~L~k~G~~V~viEk~~   35 (314)
T d2bi7a1           2 SKKILIVGA-GFSGAVIGRQLAEKGHQVHIIDQRD   35 (314)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHTTTCEEEEEESSS
T ss_pred             CCEEEEECC-cHHHHHHHHHHHhCCCCEEEEECCC
Confidence            568999996 9999999998888899999999664

>d2i0za1 c.3.1.8 (A:1-192,A:362-420) Flavoprotein BC4706 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: HI0933 N-terminal domain-like
domain: Flavoprotein BC4706
species: Bacillus cereus [TaxId: 1396]

Probab=92.07  E-value=0.072  Score=36.57  Aligned_cols=32  Identities=22%  Similarity=0.171  Sum_probs=27.3

Q ss_pred             EEEecCCchHHHHHHHHHHHcCCEEEEEeCCHH
Q 028523           22 VFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKD   54 (208)
Q Consensus        22 vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~   54 (208)
                      |+|.|| |+.|++++..+...|.+|+++.+++.
T Consensus         5 ViIIGa-G~aGl~aA~~la~~G~~V~liEk~~~   36 (251)
T d2i0za1           5 VIVIGG-GPSGLMAAIGAAEEGANVLLLDKGNK   36 (251)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEECSSSS
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCcEEEEeCCCC
Confidence            778896 99999988888888999999986643

>d1pzga1 c.2.1.5 (A:14-163) Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5811]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Toxoplasma gondii [TaxId: 5811]

Probab=91.89  E-value=0.88  Score=28.71  Aligned_cols=38  Identities=21%  Similarity=0.179  Sum_probs=30.2

Q ss_pred             CCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCHHH
Q 028523           17 KQGEYVFVSAASGAVGQLVGQFAKLVGC-YVVGSAGSKDK   55 (208)
Q Consensus        17 ~~g~~vli~ga~g~vG~~a~qla~~~g~-~v~~~~~s~~~   55 (208)
                      ++...|.|.|+ |.+|..++.++...+. +++..+.++++
T Consensus         5 ~k~~KI~IIGa-G~VG~~lA~~l~~~~~~el~L~D~~~~~   43 (154)
T d1pzga1           5 QRRKKVAMIGS-GMIGGTMGYLCALRELADVVLYDVVKGM   43 (154)
T ss_dssp             SCCCEEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSSSH
T ss_pred             cCCCcEEEECC-CHHHHHHHHHHHhCCCceEEEEEecccc
Confidence            45678899996 9999888887777776 88888877654

>d1trba1 c.3.1.5 (A:1-118,A:245-316) Thioredoxin reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Thioredoxin reductase
species: Escherichia coli [TaxId: 562]

Probab=91.76  E-value=0.039  Score=36.43  Aligned_cols=34  Identities=15%  Similarity=0.175  Sum_probs=29.1

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCC
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGS   52 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s   52 (208)
                      ++..|+|.|| |+.|+.++..+...|.+|+++.+.
T Consensus         4 k~~dVvIIGG-GpaGl~AA~~~ar~g~~v~iie~~   37 (190)
T d1trba1           4 KHSKLLILGS-GPAGYTAAVYAARANLQPVLITGM   37 (190)
T ss_dssp             EEEEEEEECC-SHHHHHHHHHHHTTTCCCEEECCS
T ss_pred             CCCcEEEECC-CHHHHHHHHHHHHcCCceEEEEee
Confidence            4557999996 999999999999999999988754

>d1gtea3 c.3.1.1 (A:288-440) Dihydropyrimidine dehydrogenase, domain 3 {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: C-terminal domain of adrenodoxin reductase-like
domain: Dihydropyrimidine dehydrogenase, domain 3
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=91.57  E-value=0.18  Score=32.11  Aligned_cols=35  Identities=20%  Similarity=-0.018  Sum_probs=28.5

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCH
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGC-YVVGSAGSK   53 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~-~v~~~~~s~   53 (208)
                      .+++|+|.|| |.+|.-++..+..+|+ .|+++.+.+
T Consensus        44 ~~~kVvVIGG-GdtA~D~A~~a~r~GA~~V~vi~rr~   79 (153)
T d1gtea3          44 IRGAVIVLGA-GDTAFDCATSALRCGARRVFLVFRKG   79 (153)
T ss_dssp             CCSEEEEECS-SHHHHHHHHHHHHTTCSEEEEECSSC
T ss_pred             CCCEEEEECC-ChhHHHHHHHHHHcCCcceeEEEeCC
Confidence            4678999996 9999988888888898 677777653

>d2dw4a2 c.3.1.2 (A:274-654,A:764-831) Lysine-specific histone demethylase 1, LSD1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Lysine-specific histone demethylase 1, LSD1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.54  E-value=0.13  Score=36.64  Aligned_cols=35  Identities=17%  Similarity=0.149  Sum_probs=30.1

Q ss_pred             CCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCC
Q 028523           17 KQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGS   52 (208)
Q Consensus        17 ~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s   52 (208)
                      ++..+|+|+|| |-.|+.++..+...|.+|.+...+
T Consensus         3 ~~~~kViVIGa-G~aGL~aA~~L~~~G~~V~VlEa~   37 (449)
T d2dw4a2           3 KKTGKVIIIGS-GVSGLAAARQLQSFGMDVTLLEAR   37 (449)
T ss_dssp             SCCCEEEEECC-BHHHHHHHHHHHHTTCEEEEECSS
T ss_pred             CCCCcEEEECC-CHHHHHHHHHHHhCCCCEEEEeCC
Confidence            45567999996 999999999999999999998754

>d1vkna1 c.2.1.3 (A:1-144,A:308-339) N-acetyl-gamma-glutamyl-phosphate reductase ArgC {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: N-acetyl-gamma-glutamyl-phosphate reductase ArgC
species: Thermotoga maritima [TaxId: 2336]

Probab=91.47  E-value=0.64  Score=30.18  Aligned_cols=90  Identities=11%  Similarity=-0.013  Sum_probs=49.0

Q ss_pred             EEEEecCCchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHH---HhcCCCeeEecCCCccHHHHHHhHCCCCccEEEeCC
Q 028523           21 YVFVSAASGAVGQLVGQFAKLV-GCYVVGSAGSKDKVDLLK---NKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENV   96 (208)
Q Consensus        21 ~vli~ga~g~vG~~a~qla~~~-g~~v~~~~~s~~~~~~~~---~~~g~~~v~~~~~~~~~~~~~~~~~~~~~d~v~d~~   96 (208)
                      +|.|.||||-+|+-.++++... ..++.....+...-+.+.   ..+-....+...   +..+...     ..|++|-+.
T Consensus         3 kVaIvGATGyvG~eLirlL~~HP~~ei~~l~s~~~aG~~i~~~~p~~~~~~~~~~~---~~~~~~~-----~~dvvf~a~   74 (176)
T d1vkna1           3 RAGIIGATGYTGLELVRLLKNHPEAKITYLSSRTYAGKKLEEIFPSTLENSILSEF---DPEKVSK-----NCDVLFTAL   74 (176)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHCTTEEEEEEECSTTTTSBHHHHCGGGCCCCBCBCC---CHHHHHH-----HCSEEEECC
T ss_pred             EEEEECCCcHHHHHHHHHHHhCCCceEEEeeccccCCCcccccCchhhcccccccc---CHhHhcc-----ccceEEEcc
Confidence            5889999999999999998764 457666653332212222   011111122111   3222222     389999999


Q ss_pred             CchhHHHHHHhhccCCEEEEEec
Q 028523           97 GGKMLDAVLLNMRIQGRITLCGM  119 (208)
Q Consensus        97 g~~~~~~~~~~l~~~G~~v~~g~  119 (208)
                      +.......... ..+-+++..+.
T Consensus        75 p~~~s~~~~~~-~~~~~VIDlSa   96 (176)
T d1vkna1          75 PAGASYDLVRE-LKGVKIIDLGA   96 (176)
T ss_dssp             STTHHHHHHTT-CCSCEEEESSS
T ss_pred             ccHHHHHHHHh-hccceEEecCc
Confidence            95443333333 24556655443

>d2b4ro1 c.2.1.3 (O:4-152,O:319-335) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=91.27  E-value=0.49  Score=30.44  Aligned_cols=94  Identities=14%  Similarity=0.073  Sum_probs=58.1

Q ss_pred             EEEEecCCchHHHHHHHHHHHc-CCEEEEEeC---CHHHHHHHHHhcCCC-----e---------eEe------cCCCcc
Q 028523           21 YVFVSAASGAVGQLVGQFAKLV-GCYVVGSAG---SKDKVDLLKNKFGFD-----E---------AFN------YKEEPD   76 (208)
Q Consensus        21 ~vli~ga~g~vG~~a~qla~~~-g~~v~~~~~---s~~~~~~~~~~~g~~-----~---------v~~------~~~~~~   76 (208)
                      +|.|.| -|-+|.++.+.+... ..+++++-.   +.+.+.++- ++...     .         +++      +++. +
T Consensus         2 kigING-fGRIGR~v~R~~~~~~~~~iv~INd~~~d~~~~ayLl-kyDS~hG~~~~~v~~~~~~l~i~~~~I~i~~~~-~   78 (166)
T d2b4ro1           2 KLGING-FGRIGRLVFRAAFGRKDIEVVAINDPFMDLNHLCYLL-KYDSVHGQFPCEVTHADGFLLIGEKKVSVFAEK-D   78 (166)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHTCSSEEEEEEECTTCCHHHHHHHH-HCCTTTCSCSSCEEEETTEEEESSCEEEEECCS-S
T ss_pred             eEEEEC-CCHHHHHHHHHHhhCCCcEEEEECCCCCChHHhhhhh-hcccccccceeeeccCCceEEecCcEEEEEeCC-C
Confidence            578888 699999999887654 457777753   345566665 33211     0         010      1111 1


Q ss_pred             HHHHHHhHCCC--CccEEEeCCC-chhHHHHHHhhccCCEEEEEeccc
Q 028523           77 LDAALKRYFPE--GINIYFENVG-GKMLDAVLLNMRIQGRITLCGMIS  121 (208)
Q Consensus        77 ~~~~~~~~~~~--~~d~v~d~~g-~~~~~~~~~~l~~~G~~v~~g~~~  121 (208)
                      ..    +.-..  ++|+|+||+| ....+.+...|..|-.-|.+..++
T Consensus        79 p~----~i~W~~~gvdiViEcTG~f~~~~~~~~hl~~gakkViiSAP~  122 (166)
T d2b4ro1          79 PS----QIPWGKCQVDVVCESTGVFLTKELASSHLKGGAKKVIMSAPP  122 (166)
T ss_dssp             GG----GCCHHHHTCSEEEECSSSCCSHHHHTHHHHTTCSEEEESSCC
T ss_pred             hH----HccccccCCCEEEEecccccchhhhhhhhccCCCEEEEeccc
Confidence            11    11111  7999999999 567778888888876666666544

>d1ixka_ c.66.1.38 (A:) Hypothetical methyltransferase PH1374 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: NOL1/NOP2/sun
domain: Hypothetical methyltransferase PH1374
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=91.13  E-value=1.8  Score=30.77  Aligned_cols=101  Identities=17%  Similarity=0.204  Sum_probs=63.0

Q ss_pred             hcCCCCCCEEEEecCCchHHHHHHHHHHHcC--CEEEEEeCCHHHHHHHHH---hcCCCeeEecCCCccHHHHHHhHCCC
Q 028523           13 VCSPKQGEYVFVSAASGAVGQLVGQFAKLVG--CYVVGSAGSKDKVDLLKN---KFGFDEAFNYKEEPDLDAALKRYFPE   87 (208)
Q Consensus        13 ~~~~~~g~~vli~ga~g~vG~~a~qla~~~g--~~v~~~~~s~~~~~~~~~---~~g~~~v~~~~~~~~~~~~~~~~~~~   87 (208)
                      ...+++|++||=..|  +-|--+.+++..++  ..+++.+.++.+...+++   .+|...++..... ...  + .....
T Consensus       111 ~l~~~~g~~vlD~CA--apGgKt~~l~~~~~~~~~i~a~d~~~~r~~~l~~~~~r~~~~~i~~~~~d-~~~--~-~~~~~  184 (313)
T d1ixka_         111 ALDPKPGEIVADMAA--APGGKTSYLAQLMRNDGVIYAFDVDENRLRETRLNLSRLGVLNVILFHSS-SLH--I-GELNV  184 (313)
T ss_dssp             HHCCCTTCEEEECCS--SCSHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHTCCSEEEESSC-GGG--G-GGGCC
T ss_pred             cccCCccceeeeccc--chhhhhHhhhhhcccccceeeeccCHHHHHHHHHHHHHHHhhcccccccc-ccc--c-ccccc
Confidence            357899999875543  33444566776654  489999999998776643   5677655444332 111  1 11233


Q ss_pred             CccEEEe---CCCch--------------------------hHHHHHHhhccCCEEEEEec
Q 028523           88 GINIYFE---NVGGK--------------------------MLDAVLLNMRIQGRITLCGM  119 (208)
Q Consensus        88 ~~d~v~d---~~g~~--------------------------~~~~~~~~l~~~G~~v~~g~  119 (208)
                      .||.|+-   |+|..                          .+..++..+++||++|..-.
T Consensus       185 ~fD~ILvDaPCSg~G~~~r~p~~~~~~~~~~~~~l~~~Q~~iL~~a~~~lk~gG~lVYsTC  245 (313)
T d1ixka_         185 EFDKILLDAPCTGSGTIHKNPERKWNRTMDDIKFCQGLQMRLLEKGLEVLKPGGILVYSTC  245 (313)
T ss_dssp             CEEEEEEECCTTSTTTCC--------CCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEES
T ss_pred             cccEEEEccccccCCceeeccchhhhhhhhHHHHHHHHHHHHHHhhhheeCCCcEEEEeec
Confidence            6887754   55522                          15778889999999877654

>d1x7da_ c.2.1.13 (A:) Ornithine cyclodeaminase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Ornithine cyclodeaminase-like
domain: Ornithine cyclodeaminase
species: Pseudomonas putida [TaxId: 303]

Probab=90.83  E-value=0.47  Score=34.37  Aligned_cols=95  Identities=13%  Similarity=0.056  Sum_probs=63.0

Q ss_pred             CCCCCEEEEecCCchHHHHHHHHH-HHcCC-EEEEEeCCHHHHHHHHHhcCCC---eeEecCCCccHHHHHHhHCCCCcc
Q 028523           16 PKQGEYVFVSAASGAVGQLVGQFA-KLVGC-YVVGSAGSKDKVDLLKNKFGFD---EAFNYKEEPDLDAALKRYFPEGIN   90 (208)
Q Consensus        16 ~~~g~~vli~ga~g~vG~~a~qla-~~~g~-~v~~~~~s~~~~~~~~~~~g~~---~v~~~~~~~~~~~~~~~~~~~~~d   90 (208)
                      -+...++.|+| +|..+...++.. ...+. +|.+..+++++.+.+.+++...   .+....   +..+.++     +.|
T Consensus       125 ~~da~~l~iiG-~G~QA~~~~~a~~~v~~i~~V~v~~r~~~~~~~~~~~l~~~~g~~v~~~~---s~~eav~-----~AD  195 (340)
T d1x7da_         125 RPNARKMALIG-NGAQSEFQALAFHKHLGIEEIVAYDTDPLATAKLIANLKEYSGLTIRRAS---SVAEAVK-----GVD  195 (340)
T ss_dssp             CTTCCEEEEEC-CSTTHHHHHHHHHHHSCCCEEEEECSSHHHHHHHHHHHTTCTTCEEEECS---SHHHHHT-----TCS
T ss_pred             ccCCceEEEEc-ccHHHHHHHHHHhhhcceeeeEEEecChHHHHHHHHhhhhccCCCceecC---CHHHHHh-----cCC
Confidence            35567889999 598888777755 45577 8999999988766554454321   221111   4555554     489


Q ss_pred             EEEeCCCch----hHHHHHHhhccCCEEEEEeccc
Q 028523           91 IYFENVGGK----MLDAVLLNMRIQGRITLCGMIS  121 (208)
Q Consensus        91 ~v~d~~g~~----~~~~~~~~l~~~G~~v~~g~~~  121 (208)
                      +|+-|+.+.    .+.  .+.++||-++..+|...
T Consensus       196 Ii~t~Tas~s~~Pv~~--~~~l~pG~hI~aiGs~~  228 (340)
T d1x7da_         196 IITTVTADKAYATIIT--PDMLEPGMHLNAVGGDC  228 (340)
T ss_dssp             EEEECCCCSSEEEEEC--GGGCCTTCEEEECSCCB
T ss_pred             ceeeccccCCCCcccc--hhhcCCCCEEeecccch
Confidence            999877532    333  24789999999988754

>d1r6da_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces venezuelae [TaxId: 54571]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptomyces venezuelae [TaxId: 54571]

Probab=90.58  E-value=0.041  Score=39.59  Aligned_cols=24  Identities=13%  Similarity=0.130  Sum_probs=21.0

Q ss_pred             EEEEecCCchHHHHHHHHHHHcCC
Q 028523           21 YVFVSAASGAVGQLVGQFAKLVGC   44 (208)
Q Consensus        21 ~vli~ga~g~vG~~a~qla~~~g~   44 (208)
                      +|||+||+|-+|..+++.+...|.
T Consensus         2 kIlItG~tGfIG~~l~~~L~~~g~   25 (322)
T d1r6da_           2 RLLVTGGAGFIGSHFVRQLLAGAY   25 (322)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTSC
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCC
Confidence            589999999999999988877764

>d1lvla1 c.3.1.5 (A:1-150,A:266-335) Dihydrolipoamide dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=90.56  E-value=0.15  Score=34.24  Aligned_cols=30  Identities=20%  Similarity=0.231  Sum_probs=26.8

Q ss_pred             EEEecCCchHHHHHHHHHHHcCCEEEEEeCC
Q 028523           22 VFVSAASGAVGQLVGQFAKLVGCYVVGSAGS   52 (208)
Q Consensus        22 vli~ga~g~vG~~a~qla~~~g~~v~~~~~s   52 (208)
                      ++|.|| |+.|+.++..+..+|.+|.++...
T Consensus         8 lvVIG~-GpaGl~aA~~aa~~G~~V~liE~~   37 (220)
T d1lvla1           8 LLIIGG-GPGGYVAAIRAGQLGIPTVLVEGQ   37 (220)
T ss_dssp             EEEECC-SHHHHHHHHHHHHHTCCEEEECSS
T ss_pred             EEEECC-CHHHHHHHHHHHHCCCcEEEEecC
Confidence            678895 999999999999999999999854

>d1omoa_ c.2.1.13 (A:) Archaeal alanine dehydrogenase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Ornithine cyclodeaminase-like
domain: Archaeal alanine dehydrogenase
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=90.55  E-value=2.1  Score=30.51  Aligned_cols=92  Identities=8%  Similarity=-0.015  Sum_probs=60.8

Q ss_pred             CCCCCEEEEecCCchHHHHHHHHHHH-cCC-EEEEEeCCHHHHHHHHHh---cCCCeeEecCCCccHHHHHHhHCCCCcc
Q 028523           16 PKQGEYVFVSAASGAVGQLVGQFAKL-VGC-YVVGSAGSKDKVDLLKNK---FGFDEAFNYKEEPDLDAALKRYFPEGIN   90 (208)
Q Consensus        16 ~~~g~~vli~ga~g~vG~~a~qla~~-~g~-~v~~~~~s~~~~~~~~~~---~g~~~v~~~~~~~~~~~~~~~~~~~~~d   90 (208)
                      -+...++.|+| +|..+...++.... ... +|.+..+++++.+.+.+.   .+.....      +..+.+.     +.|
T Consensus       122 ~~~~~~l~iiG-aG~QA~~~~~al~~~~~i~~i~v~~r~~e~~~~~~~~~~~~~~~~~~------~~~~a~~-----~aD  189 (320)
T d1omoa_         122 RKNSSVFGFIG-CGTQAYFQLEALRRVFDIGEVKAYDVREKAAKKFVSYCEDRGISASV------QPAEEAS-----RCD  189 (320)
T ss_dssp             CTTCCEEEEEC-CSHHHHHHHHHHHHHSCCCEEEEECSSHHHHHHHHHHHHHTTCCEEE------CCHHHHT-----SSS
T ss_pred             cCCccEEEEec-CcccHHHHHHHHHHHhhhhhcccccCCHHHHHHHHHHHHhcCCcccc------chhhhhc-----ccc
Confidence            34557888998 59999887776655 455 899999998876555433   3333222      1122222     489


Q ss_pred             EEEeCCCc--hhHHHHHHhhccCCEEEEEeccc
Q 028523           91 IYFENVGG--KMLDAVLLNMRIQGRITLCGMIS  121 (208)
Q Consensus        91 ~v~d~~g~--~~~~~~~~~l~~~G~~v~~g~~~  121 (208)
                      +|+.|+.+  +.+..  +.+++|-++..+|...
T Consensus       190 iV~taT~s~~P~~~~--~~l~~G~hv~~iGs~~  220 (320)
T d1omoa_         190 VLVTTTPSRKPVVKA--EWVEEGTHINAIGADG  220 (320)
T ss_dssp             EEEECCCCSSCCBCG--GGCCTTCEEEECSCCS
T ss_pred             EEEEeccCcccccch--hhcCCCCeEeecCCcc
Confidence            99998884  33332  4589999999988754

>d1b5qa1 c.3.1.2 (A:5-293,A:406-463) Polyamine oxidase {Maize (Zea mays) [TaxId: 4577]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Polyamine oxidase
species: Maize (Zea mays) [TaxId: 4577]

Probab=90.52  E-value=0.14  Score=34.98  Aligned_cols=32  Identities=19%  Similarity=0.134  Sum_probs=26.9

Q ss_pred             EEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCH
Q 028523           21 YVFVSAASGAVGQLVGQFAKLVGC-YVVGSAGSK   53 (208)
Q Consensus        21 ~vli~ga~g~vG~~a~qla~~~g~-~v~~~~~s~   53 (208)
                      .|+|.|| |..|+.++..++..|. +|.+..+++
T Consensus         2 ~V~IIGa-G~aGL~aA~~L~~~G~~~V~vlE~~~   34 (347)
T d1b5qa1           2 RVIVVGA-GMSGISAAKRLSEAGITDLLILEATD   34 (347)
T ss_dssp             CEEEECC-BHHHHHHHHHHHHTTCCCEEEECSSS
T ss_pred             CEEEECC-cHHHHHHHHHHHhCCCCcEEEEECCC
Confidence            4889996 9999999998888897 698888653

>d1gesa1 c.3.1.5 (A:3-146,A:263-335) Glutathione reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Escherichia coli [TaxId: 562]

Probab=90.51  E-value=0.14  Score=34.31  Aligned_cols=30  Identities=13%  Similarity=-0.004  Sum_probs=26.7

Q ss_pred             EEEecCCchHHHHHHHHHHHcCCEEEEEeCC
Q 028523           22 VFVSAASGAVGQLVGQFAKLVGCYVVGSAGS   52 (208)
Q Consensus        22 vli~ga~g~vG~~a~qla~~~g~~v~~~~~s   52 (208)
                      |+|.|| |+.|+.++..+..+|.+|.++.+.
T Consensus         5 vvVIG~-G~aG~~aA~~a~~~G~kV~iiE~~   34 (217)
T d1gesa1           5 YIAIGG-GSGGIASINRAAMYGQKCALIEAK   34 (217)
T ss_dssp             EEEECC-SHHHHHHHHHHHTTTCCEEEEESS
T ss_pred             EEEECC-CHHHHHHHHHHHHCCCEEEEEecc
Confidence            678896 999999999999999999999854

>d1wkva1 c.79.1.1 (A:2-383) O-acetylserine sulfhydrylase (Cysteine synthase) {Archaeon Aeropyrum pernix [TaxId: 56636]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: O-acetylserine sulfhydrylase (Cysteine synthase)
species: Archaeon Aeropyrum pernix [TaxId: 56636]

Probab=90.48  E-value=0.79  Score=33.71  Aligned_cols=62  Identities=16%  Similarity=0.078  Sum_probs=42.1

Q ss_pred             HHHHHHHh-cCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeC---CHHHHHHHHHhcCCCeeE
Q 028523            6 AYAGFFEV-CSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAG---SKDKVDLLKNKFGFDEAF   69 (208)
Q Consensus         6 A~~~l~~~-~~~~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~---s~~~~~~~~~~~g~~~v~   69 (208)
                      |++++.+. .+++++++ +|...+|..|.+++..|+.+|.+++++..   ++.+.+.++ .+|+.-+.
T Consensus       130 A~~~i~~A~~~~~~g~~-VVeaSSGN~GiAlA~~aa~lGik~~Iv~P~~~~~~K~~~ir-a~GAeVi~  195 (382)
T d1wkva1         130 AVEIISRLSRRVEKGSL-VADATSSNFGVALSAVARLYGYRARVYLPGAAEEFGKLLPR-LLGAQVIV  195 (382)
T ss_dssp             HHHHHHHHTTTSCTTCE-EEEECCHHHHHHHHHHHHHTTCEEEEEEETTSCHHHHHHHH-HTTCEEEE
T ss_pred             HHHHHHHHHhccCCCCE-EEEeCCcHHHHHHHHHHHHcCCCEEEEeecccccccccccc-ccCcceee
Confidence            44444332 24677775 45566799999999999999997666664   344666677 88885443

>d1feca2 c.3.1.5 (A:170-286) Trypanothione reductase {Crithidia fasciculata [TaxId: 5656]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Trypanothione reductase
species: Crithidia fasciculata [TaxId: 5656]

Probab=90.42  E-value=0.29  Score=29.31  Aligned_cols=35  Identities=9%  Similarity=-0.021  Sum_probs=27.6

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHc---CCEEEEEeCCH
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLV---GCYVVGSAGSK   53 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~---g~~v~~~~~s~   53 (208)
                      ..++++|.|| |.+|.-++++...+   |.+|.++.+++
T Consensus        17 ~p~~v~IiGg-G~ig~E~A~~l~~~~~~g~~Vtli~~~~   54 (117)
T d1feca2          17 APKRALCVGG-GYISIEFAGIFNAYKARGGQVDLAYRGD   54 (117)
T ss_dssp             CCSEEEEECS-SHHHHHHHHHHHHHSCTTCEEEEEESSS
T ss_pred             cCCeEEEECC-ChHHHHHHHHhHhhcccccccceecccc
Confidence            3578999996 99999888776544   77899888664

>d1w4xa1 c.3.1.5 (A:10-154,A:390-542) Phenylacetone monooxygenase {Thermobifida fusca [TaxId: 2021]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Phenylacetone monooxygenase
species: Thermobifida fusca [TaxId: 2021]

Probab=90.36  E-value=0.13  Score=36.65  Aligned_cols=32  Identities=22%  Similarity=0.056  Sum_probs=28.1

Q ss_pred             EEEEecCCchHHHHHHHHHHHcCCEEEEEeCCH
Q 028523           21 YVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSK   53 (208)
Q Consensus        21 ~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~   53 (208)
                      .|+|+|| |..|++++..++..|.++.+....+
T Consensus         9 dV~IIGA-G~sGl~~a~~L~~~G~~v~i~Ek~~   40 (298)
T d1w4xa1           9 DVLVVGA-GFSGLYALYRLRELGRSVHVIETAG   40 (298)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred             CEEEECc-cHHHHHHHHHHHhCCCCEEEEEcCC
Confidence            4889996 9999999999999999999888654

>d1yovb1 c.111.1.2 (B:12-437) UBA3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Ubiquitin activating enzymes (UBA)
domain: UBA3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.34  E-value=0.23  Score=37.25  Aligned_cols=32  Identities=22%  Similarity=0.097  Sum_probs=26.8

Q ss_pred             CEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCC
Q 028523           20 EYVFVSAASGAVGQLVGQFAKLVGC-YVVGSAGS   52 (208)
Q Consensus        20 ~~vli~ga~g~vG~~a~qla~~~g~-~v~~~~~s   52 (208)
                      .+|||.|+ ||+|..++..+-..|. ++..++..
T Consensus        38 ~kVlvvG~-GglG~ei~k~L~~~Gvg~i~lvD~D   70 (426)
T d1yovb1          38 CKVLVIGA-GGLGCELLKNLALSGFRQIHVIDMD   70 (426)
T ss_dssp             CCEEEECS-STTHHHHHHHHHTTTCCCEEEECCC
T ss_pred             CeEEEECC-CHHHHHHHHHHHHcCCCeEEEEECC
Confidence            57999996 9999999998888898 77777743

>d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

Probab=90.31  E-value=0.11  Score=37.54  Aligned_cols=31  Identities=13%  Similarity=0.099  Sum_probs=24.8

Q ss_pred             CEEEEecCCchHHHHHHHHHHHcCC--EEEEEe
Q 028523           20 EYVFVSAASGAVGQLVGQFAKLVGC--YVVGSA   50 (208)
Q Consensus        20 ~~vli~ga~g~vG~~a~qla~~~g~--~v~~~~   50 (208)
                      .+|||+||+|-+|...+..+...|.  +|++.+
T Consensus         3 mkILVTGgtGfIGs~lv~~L~~~g~~v~v~~~d   35 (346)
T d1oc2a_           3 KNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLD   35 (346)
T ss_dssp             SEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEE
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCCeEEEEEe
Confidence            4799999999999999888877776  455544

>d1pn0a1 c.3.1.2 (A:1-240,A:342-461) Phenol hydroxylase {Soil-living yeast (Trichosporon cutaneum) [TaxId: 5554]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Phenol hydroxylase
species: Soil-living yeast (Trichosporon cutaneum) [TaxId: 5554]

Probab=90.27  E-value=0.11  Score=37.50  Aligned_cols=31  Identities=16%  Similarity=0.137  Sum_probs=24.9

Q ss_pred             EEEecCCchHHHHHHHHHH-----HcCCEEEEEeCCH
Q 028523           22 VFVSAASGAVGQLVGQFAK-----LVGCYVVGSAGSK   53 (208)
Q Consensus        22 vli~ga~g~vG~~a~qla~-----~~g~~v~~~~~s~   53 (208)
                      |+|.|| |++|++++..+.     ..|.+|++..+++
T Consensus        10 V~IvGa-G~aGl~lA~~La~~~~~~~G~~v~vlEr~~   45 (360)
T d1pn0a1          10 VLIVGA-GPAGLMAARVLSEYVRQKPDLKVRIIDKRS   45 (360)
T ss_dssp             EEEECC-SHHHHHHHHHHHHHHHHSTTCCEEEECSSS
T ss_pred             EEEECc-CHHHHHHHHHHHhcccccCCCcEEEEcCCC
Confidence            789997 999998887763     4689999988654

>d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

Probab=90.19  E-value=0.16  Score=37.12  Aligned_cols=30  Identities=13%  Similarity=0.140  Sum_probs=25.0

Q ss_pred             EEEEecCCchHHHHHHHHHHHcCCEE-EEEe
Q 028523           21 YVFVSAASGAVGQLVGQFAKLVGCYV-VGSA   50 (208)
Q Consensus        21 ~vli~ga~g~vG~~a~qla~~~g~~v-~~~~   50 (208)
                      +|||+||+|-+|..++..+...|.++ ++++
T Consensus         2 kILItG~tGfIGs~l~~~L~~~g~~vv~~~d   32 (361)
T d1kewa_           2 KILITGGAGFIGSAVVRHIIKNTQDTVVNID   32 (361)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHHCSCEEEEEE
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCCEEEEEe
Confidence            58999999999999998888888864 4444

>d1rm4a1 c.2.1.3 (A:1-148,A:313-333) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Spinach (Spinacia oleracea) [TaxId: 3562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Spinach (Spinacia oleracea) [TaxId: 3562]

Probab=90.17  E-value=0.8  Score=29.58  Aligned_cols=94  Identities=16%  Similarity=0.110  Sum_probs=54.4

Q ss_pred             EEEEecCCchHHHHHHHHHHHcC---CEEEEEeCC--HHHHHHHHHhc----CC-C-ee---------Ee------cCCC
Q 028523           21 YVFVSAASGAVGQLVGQFAKLVG---CYVVGSAGS--KDKVDLLKNKF----GF-D-EA---------FN------YKEE   74 (208)
Q Consensus        21 ~vli~ga~g~vG~~a~qla~~~g---~~v~~~~~s--~~~~~~~~~~~----g~-~-~v---------~~------~~~~   74 (208)
                      +|.|.| -|-+|.++.+.+....   .+++++-..  .+...++- ++    |. + .+         ++      +++.
T Consensus         2 kIgING-fGRIGR~v~R~~~~~~~~~i~ivaINd~~~~~~~ayLl-kyDSvhG~~~~~i~~~~~~~~~ing~~I~~~~~~   79 (172)
T d1rm4a1           2 KVAING-FGRIGRNFLRCWHGRKDSPLDVVVINDTGGVKQASHLL-KYDSILGTFDADVKTAGDSAISVDGKVIKVVSDR   79 (172)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHHCSSCSEEEEEEECTTCHHHHHHHH-HCCTTTCSCSSCEEECTTSEEEETTEEEEEECCS
T ss_pred             EEEEEC-CCHHHHHHHHHHHhCCCCCEEEEEEcCCCCHHHHHHHH-hcCcccccccceeEecCCcceEECCEEEEEecCC
Confidence            578888 6999999998766432   466665533  22344444 32    11 0 01         10      0110


Q ss_pred             ccHHHHHHhHCCC--CccEEEeCCC-chhHHHHHHhhccCCEEEEEeccc
Q 028523           75 PDLDAALKRYFPE--GINIYFENVG-GKMLDAVLLNMRIQGRITLCGMIS  121 (208)
Q Consensus        75 ~~~~~~~~~~~~~--~~d~v~d~~g-~~~~~~~~~~l~~~G~~v~~g~~~  121 (208)
                       +.    .++-..  ++|+|+||+| ....+.+...|..|-.-|.+..+.
T Consensus        80 -~p----~~i~W~~~gvDiViEcTG~f~~~~~~~~hl~~GakkViiSAP~  124 (172)
T d1rm4a1          80 -NP----VNLPWGDMGIDLVIEGTGVFVDRDGAGKHLQAGAKKVLITAPG  124 (172)
T ss_dssp             -CG----GGSCHHHHTCCEEEECSSSCCBHHHHHHHHHTTCSCEEESSCC
T ss_pred             -Ch----HHCChhhcCCCEEEecCceEccHHHHHHHHhcCCceEEeeccc
Confidence             11    111111  7999999999 467778888888876556665544

>d1ebda1 c.3.1.5 (A:7-154,A:272-346) Dihydrolipoamide dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=90.05  E-value=0.18  Score=33.68  Aligned_cols=30  Identities=23%  Similarity=0.164  Sum_probs=26.2

Q ss_pred             EEEecCCchHHHHHHHHHHHcCCEEEEEeCC
Q 028523           22 VFVSAASGAVGQLVGQFAKLVGCYVVGSAGS   52 (208)
Q Consensus        22 vli~ga~g~vG~~a~qla~~~g~~v~~~~~s   52 (208)
                      ++|.|| |+.|+.++..+...|.+|.++.+.
T Consensus         6 viVIG~-GpaGl~aA~~aar~G~kV~vIEk~   35 (223)
T d1ebda1           6 TLVVGA-GPGGYVAAIRAAQLGQKVTIVEKG   35 (223)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEEESS
T ss_pred             EEEECC-CHHHHHHHHHHHHCCCEEEEEecC
Confidence            667885 999999999999999999999754

>d1z7wa1 c.79.1.1 (A:3-322) O-acetylserine sulfhydrylase (Cysteine synthase) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: O-acetylserine sulfhydrylase (Cysteine synthase)
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=89.92  E-value=2.3  Score=30.13  Aligned_cols=105  Identities=15%  Similarity=0.151  Sum_probs=63.7

Q ss_pred             cCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeC---CHHHHHHHHHhcCCCeeEec-------------------
Q 028523           14 CSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAG---SKDKVDLLKNKFGFDEAFNY-------------------   71 (208)
Q Consensus        14 ~~~~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~---s~~~~~~~~~~~g~~~v~~~-------------------   71 (208)
                      +.++.+...+|...+|..|.+.+..|+.+|.+.+++..   ++.+.+.++ .+|+.-++..                   
T Consensus        59 g~~~~~~~~vv~aSsGN~g~a~A~~a~~~g~~~~iv~p~~~~~~k~~~i~-~~Ga~vi~~~~~~~~~~~~~~~~~~~~~~  137 (320)
T d1z7wa1          59 GLIKPGESVLIEPTSGNTGVGLAFTAAAKGYKLIITMPASMSTERRIILL-AFGVELVLTDPAKGMKGAIAKAEEILAKT  137 (320)
T ss_dssp             TSCCTTTCEEEEECSSHHHHHHHHHHHHHTCEEEEEEETTSCHHHHHHHH-HTTCEEEEECGGGHHHHHHHHHHHHHHHC
T ss_pred             CCCCCCCceEEeeCCchHHHHHHHHHHhhccceEEeehhhhhhhhhhhhh-ccCcceEEeeccccccccchhHHHHHHhC
Confidence            45666666677777899999999999999996555552   344666666 7887433211                   


Q ss_pred             ---------CCCc-------cHHHHHHhHCCCCccEEEeCCCc-hhHH---HHHHhhccCCEEEEEec
Q 028523           72 ---------KEEP-------DLDAALKRYFPEGINIYFENVGG-KMLD---AVLLNMRIQGRITLCGM  119 (208)
Q Consensus        72 ---------~~~~-------~~~~~~~~~~~~~~d~v~d~~g~-~~~~---~~~~~l~~~G~~v~~g~  119 (208)
                               .+..       ....++.+...+.+|.++-++|+ ..+.   ..++...+.-+++-+..
T Consensus       138 ~~~~~~~~~~~~~n~~~g~~t~~~EI~~q~~~~~D~vv~~vGgGg~~~Gi~~~~k~~~~~~~~igve~  205 (320)
T d1z7wa1         138 PNGYMLQQFENPANPKIHYETTGPEIWKGTGGKIDGFVSGIGTGGTITGAGKYLKEQNANVKLYGVEP  205 (320)
T ss_dssp             TTEEECCTTTCTHHHHHHHHTHHHHHHHHTTTCCCEEEEECSSSHHHHHHHHHHHHHCTTCEEEEEEE
T ss_pred             CCceecccccccchHHHhhhhHHHHHHHhccCCCCEEEeCCCCCcccchhhhhhhhhhcceeeecccc
Confidence                     1100       11122333333468999998884 4433   44445566667765543

>d2a14a1 c.66.1.15 (A:5-261) Indolethylamine N-methyltransferase, INMT {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arylamine N-methyltransferase
domain: Indolethylamine N-methyltransferase, INMT
species: Human (Homo sapiens) [TaxId: 9606]

Probab=89.90  E-value=0.06  Score=37.24  Aligned_cols=46  Identities=13%  Similarity=-0.127  Sum_probs=31.1

Q ss_pred             CCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHh
Q 028523           15 SPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNK   62 (208)
Q Consensus        15 ~~~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~   62 (208)
                      ...+|.+||=.|+ | .|.....+++..+.+|++++.|+...+.+++.
T Consensus        48 ~~~~g~~vLDlGc-G-~G~~~~~~~~~~~~~v~giD~S~~~i~~a~~~   93 (257)
T d2a14a1          48 GGLQGDTLIDIGS-G-PTIYQVLAACDSFQDITLSDFTDRNREELEKW   93 (257)
T ss_dssp             TSCCEEEEEESSC-T-TCCGGGTTGGGTEEEEEEEESCHHHHHHHHHH
T ss_pred             cCCCCCEEEEECC-C-CCHhHHHHhccccCcEEEecCCHHHHHHHHHH
Confidence            3467888988884 3 35444444443333899999999988888743

>d2ivda1 c.3.1.2 (A:10-306,A:415-464) Protoporphyrinogen oxidase {Myxococcus xanthus [TaxId: 34]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Protoporphyrinogen oxidase
species: Myxococcus xanthus [TaxId: 34]

Probab=89.89  E-value=0.12  Score=36.06  Aligned_cols=31  Identities=26%  Similarity=0.185  Sum_probs=27.3

Q ss_pred             EEEEecCCchHHHHHHHHHHHcCCEEEEEeCC
Q 028523           21 YVFVSAASGAVGQLVGQFAKLVGCYVVGSAGS   52 (208)
Q Consensus        21 ~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s   52 (208)
                      .|+|.|| |..|+.++..+...|.+|.+...+
T Consensus         2 ~V~IIGa-G~aGL~aA~~L~~~G~~V~vlE~~   32 (347)
T d2ivda1           2 NVAVVGG-GISGLAVAHHLRSRGTDAVLLESS   32 (347)
T ss_dssp             CEEEECC-BHHHHHHHHHHHTTTCCEEEECSS
T ss_pred             eEEEECC-CHHHHHHHHHHHhCCCCEEEEecC
Confidence            4889996 999999999998899999998865

>d1jbqa_ c.79.1.1 (A:) Cystathionine beta-synthase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: Cystathionine beta-synthase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=89.80  E-value=2.5  Score=30.42  Aligned_cols=52  Identities=25%  Similarity=0.335  Sum_probs=38.5

Q ss_pred             cCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeC---CHHHHHHHHHhcCCCe
Q 028523           14 CSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAG---SKDKVDLLKNKFGFDE   67 (208)
Q Consensus        14 ~~~~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~---s~~~~~~~~~~~g~~~   67 (208)
                      +.+++++.|+ ...+|.-|.+.+..|+.+|.+.+++..   ++.+.+.++ .+|+.-
T Consensus        92 g~~~~~~~vv-~aSsGN~g~a~A~~a~~~Gi~~~iv~p~~~~~~k~~~i~-~~GA~v  146 (355)
T d1jbqa_          92 GTLKPGDTII-EPTSGNTGIGLALAAAVRGYRCIIVMPEKMSSEKVDVLR-ALGAEI  146 (355)
T ss_dssp             TCSCTTCEEE-EECSSHHHHHHHHHHHHHTCEEEEEECSCCCHHHHHHHH-HTTCEE
T ss_pred             CCcccCceEE-EecccchhhHHHHHHHhccCCeEEEeeccchHHHHHHHH-hcCCeE
Confidence            4566667654 455799999999999999997666653   345677777 888853

>d1f06a1 c.2.1.3 (A:1-118,A:269-320) Diaminopimelic acid dehydrogenase (DAPDH) {Corynebacterium glutamicum [TaxId: 1718]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Diaminopimelic acid dehydrogenase (DAPDH)
species: Corynebacterium glutamicum [TaxId: 1718]

Probab=89.72  E-value=0.43  Score=30.67  Aligned_cols=81  Identities=12%  Similarity=0.122  Sum_probs=52.3

Q ss_pred             EEEEecCCchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHHHHhHCCCCccEEEeCCCc-
Q 028523           21 YVFVSAASGAVGQLVGQFAKLV-GCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVGG-   98 (208)
Q Consensus        21 ~vli~ga~g~vG~~a~qla~~~-g~~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~d~v~d~~g~-   98 (208)
                      +|.|+| +|.+|...+...+.. ++++++++....+      ......+..+.+.   ..    . ...+|+|+.|++. 
T Consensus         5 rvgiiG-~G~ig~~~~~~l~~~~~~elvav~~~~~~------~~~~~~~~~~~~~---~~----~-~~~~D~Vvi~tp~~   69 (170)
T d1f06a1           5 RVAIVG-YGNLGRSVEKLIAKQPDMDLVGIFSRRAT------LDTKTPVFDVADV---DK----H-ADDVDVLFLCMGSA   69 (170)
T ss_dssp             EEEEEC-CSHHHHHHHHHHTTCSSEEEEEEEESSSC------CSSSSCEEEGGGG---GG----T-TTTCSEEEECSCTT
T ss_pred             eEEEEC-ChHHHHHHHHHHHhCCCcEEEEEEecccc------cccccccccchhh---hh----h-ccccceEEEeCCCc
Confidence            578999 599999888777765 5677766644322      1111223322221   11    1 1258999999985 


Q ss_pred             hhHHHHHHhhccCCEEEE
Q 028523           99 KMLDAVLLNMRIQGRITL  116 (208)
Q Consensus        99 ~~~~~~~~~l~~~G~~v~  116 (208)
                      ...+.+.++|..|-+++.
T Consensus        70 ~h~~~a~~aL~aG~~vv~   87 (170)
T d1f06a1          70 TDIPEQAPKFAQFACTVD   87 (170)
T ss_dssp             THHHHHHHHHTTTSEEEC
T ss_pred             ccHHHHHHHHHCCCcEEE
Confidence            578888999999888764

>d1id1a_ c.2.1.9 (A:) Rck domain from putative potassium channel Kch {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Rck domain from putative potassium channel Kch
species: Escherichia coli [TaxId: 562]

Probab=89.71  E-value=0.79  Score=28.66  Aligned_cols=60  Identities=12%  Similarity=0.037  Sum_probs=46.6

Q ss_pred             HhcCCCCCCEEEEecCCchHHHHHHHHHHHcC--CEEEEEeCCHHHHHHHHHhcCCCeeEecC
Q 028523           12 EVCSPKQGEYVFVSAASGAVGQLVGQFAKLVG--CYVVGSAGSKDKVDLLKNKFGFDEAFNYK   72 (208)
Q Consensus        12 ~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g--~~v~~~~~s~~~~~~~~~~~g~~~v~~~~   72 (208)
                      +.+++...+.+++.-.....-..++..+|.++  .++++.+.+++..+.++ ++|++.++++.
T Consensus        65 ~~a~i~~a~~vi~~~~~d~~n~~~~~~~r~~~~~~~iia~~~~~~~~~~l~-~~Gad~vi~p~  126 (153)
T d1id1a_          65 KKAGIDRCRAILALSDNDADNAFVVLSAKDMSSDVKTVLAVSDSKNLNKIK-MVHPDIILSPQ  126 (153)
T ss_dssp             HHHTTTTCSEEEECSSCHHHHHHHHHHHHHHTSSSCEEEECSSGGGHHHHH-TTCCSEEECHH
T ss_pred             HHhccccCCEEEEccccHHHHHHHHHHHHHhCCCCceEEEEcCHHHHHHHH-HCCCCEEECHH
Confidence            44677888888877656666777888888764  38999998888888888 89999888653

>d1ojta1 c.3.1.5 (A:117-275,A:401-470) Dihydrolipoamide dehydrogenase {Neisseria meningitidis [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Neisseria meningitidis [TaxId: 487]

Probab=89.65  E-value=0.2  Score=33.81  Aligned_cols=31  Identities=26%  Similarity=0.059  Sum_probs=27.0

Q ss_pred             EEEecCCchHHHHHHHHHHHcCCEEEEEeCCH
Q 028523           22 VFVSAASGAVGQLVGQFAKLVGCYVVGSAGSK   53 (208)
Q Consensus        22 vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~   53 (208)
                      |+|.|+ |+.|+.++..+...|.+|.++...+
T Consensus         9 viIIG~-GPaGlsaA~~aa~~G~~V~viE~~~   39 (229)
T d1ojta1           9 VVVLGG-GPGGYSAAFAAADEGLKVAIVERYK   39 (229)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEEESSS
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCeEEEEeccC
Confidence            678886 9999999999999999999998543

>d1v59a1 c.3.1.5 (A:1-160,A:283-355) Dihydrolipoamide dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=89.63  E-value=0.18  Score=33.90  Aligned_cols=31  Identities=16%  Similarity=0.176  Sum_probs=26.4

Q ss_pred             EEEecCCchHHHHHHHHHHHcCCEEEEEeCCH
Q 028523           22 VFVSAASGAVGQLVGQFAKLVGCYVVGSAGSK   53 (208)
Q Consensus        22 vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~   53 (208)
                      |+|.|+ |+.|+.++..+...|.+|.++...+
T Consensus         8 viVIG~-GpAGl~aA~~aa~~G~kV~lie~~~   38 (233)
T d1v59a1           8 VVIIGG-GPAGYVAAIKAAQLGFNTACVEKRG   38 (233)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEEESSS
T ss_pred             EEEECC-CHHHHHHHHHHHHCCCcEEEEEecC
Confidence            678896 9999999888888999999998553

>d2g17a1 c.2.1.3 (A:1-153,A:309-334) N-acetyl-gamma-glutamyl-phosphate reductase ArgC {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: N-acetyl-gamma-glutamyl-phosphate reductase ArgC
species: Salmonella typhimurium [TaxId: 90371]

Probab=89.16  E-value=0.47  Score=30.82  Aligned_cols=91  Identities=12%  Similarity=0.131  Sum_probs=50.4

Q ss_pred             EEEEecCCchHHHHHHHHHHHc-CCEEEEEe-CCHH-----HHHHHHHhc-CC-C-eeEecCCCccHHHHHHhHCCCCcc
Q 028523           21 YVFVSAASGAVGQLVGQFAKLV-GCYVVGSA-GSKD-----KVDLLKNKF-GF-D-EAFNYKEEPDLDAALKRYFPEGIN   90 (208)
Q Consensus        21 ~vli~ga~g~vG~~a~qla~~~-g~~v~~~~-~s~~-----~~~~~~~~~-g~-~-~v~~~~~~~~~~~~~~~~~~~~~d   90 (208)
                      +|.|.||||-+|+-.++++... ..++.... ++.+     ........+ +. + ......+.        ......+|
T Consensus         3 kVaIiGATGyvG~eLlrlL~~HP~~ei~~l~~~s~~~~aGk~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~d   74 (179)
T d2g17a1           3 NTLIVGASGYAGAELVSYVNRHPHMTITALTVSAQSNDAGKLISDLHPQLKGIVDLPLQPMSDV--------RDFSADVD   74 (179)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHCTTEEEEEEEEETTCTTTTCBHHHHCGGGTTTCCCBEEEESCG--------GGTCTTCC
T ss_pred             EEEEECcccHHHHHHHHHHHhCCCCceEeeEeecccccccccccccccccccccccccccchhh--------hhhhcccc
Confidence            5889999999999999999876 55665443 2211     122111011 11 1 11111111        01122589


Q ss_pred             EEEeCCCch-hHHHHHHhhccCCEEEEEec
Q 028523           91 IYFENVGGK-MLDAVLLNMRIQGRITLCGM  119 (208)
Q Consensus        91 ~v~d~~g~~-~~~~~~~~l~~~G~~v~~g~  119 (208)
                      ++|-|.+.. .....-..+..+-.++..+.
T Consensus        75 vvf~alp~~~s~~~~~~~~~~~~~vIDlSa  104 (179)
T d2g17a1          75 VVFLATAHEVSHDLAPQFLQAGCVVFDLSG  104 (179)
T ss_dssp             EEEECSCHHHHHHHHHHHHHTTCEEEECSS
T ss_pred             eeeccccchhHHHHhhhhhhcCceeecccc
Confidence            999999954 44445555555666766544

>d1tdja1 c.79.1.1 (A:5-335) Threonine deaminase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: Threonine deaminase
species: Escherichia coli [TaxId: 562]

Probab=89.13  E-value=2.1  Score=30.47  Aligned_cols=111  Identities=20%  Similarity=0.195  Sum_probs=63.2

Q ss_pred             HHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCC---HHHHHHHHHhcCCCeeEecCCC--------
Q 028523            6 AYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGS---KDKVDLLKNKFGFDEAFNYKEE--------   74 (208)
Q Consensus         6 A~~~l~~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s---~~~~~~~~~~~g~~~v~~~~~~--------   74 (208)
                      |++.+.....-.+...|+. ..+|..|.+++..++..|.+++++...   +.+.+.++ .+|+.-++...+.        
T Consensus        62 a~~~i~~~~~~~~~~~vv~-assGN~g~a~A~~a~~~g~~~~i~~p~~~~~~k~~~l~-~~Ga~vi~~~~~~~~~~~~~~  139 (331)
T d1tdja1          62 AYAMMAGLTEEQKAHGVIT-ASAGNHAQGVAFSSARLGVKALIVMPTATADIKVDAVR-GFGGEVLLHGANFDEAKAKAI  139 (331)
T ss_dssp             HHHHHHTTTTSSCSSSCEE-EECSSSHHHHHHHHHHTTCCEEEECCSSCCHHHHHHHH-HHSCEEECCCSSHHHHHHHHH
T ss_pred             HHHHHHHHHHhCCCCeeee-cccchhHHHHHHhhccccccceeeccccchhHHHHHHH-hcCCEEEEcCcccccchhhhh
Confidence            4555544333334444444 446899999999999999876666533   34556666 7777433211110        


Q ss_pred             ----------------cc-------HHHHHHhHCCCCccEEEeCCCc-hh---HHHHHHhhccCCEEEEEec
Q 028523           75 ----------------PD-------LDAALKRYFPEGINIYFENVGG-KM---LDAVLLNMRIQGRITLCGM  119 (208)
Q Consensus        75 ----------------~~-------~~~~~~~~~~~~~d~v~d~~g~-~~---~~~~~~~l~~~G~~v~~g~  119 (208)
                                      +.       ....+.+.. +.+|++|-++|+ ..   +...++.+.+..+++.+..
T Consensus       140 ~~~~~~~~~~~~~~~~~~~~~g~~t~~~Ei~~q~-~~~D~vv~~~G~GG~~aG~~~~~~~~~~~~~ii~ve~  210 (331)
T d1tdja1         140 ELSQQQGFTWVPPFDHPMVIAGQGTLALELLQQD-AHLDRVFVPVGGGGLAAGVAVLIKQLMPQIKVIAVEA  210 (331)
T ss_dssp             HHHHHHCCEECCSSCCHHHHHHHHHHHHHHHHHC-TTCCEEEEECSSSHHHHHHHHHHHHHCTTCEEEEEEE
T ss_pred             hhhhcCCCccccccCChHHhhhhhhHHHHHHHhc-CCCCEEEEeCChhHHHHHHHHHHHHhCCCcEEEEecc
Confidence                            00       111111111 258999999884 43   3445555667778877643

>d2bcgg1 c.3.1.3 (G:5-301) Guanine nucleotide dissociation inhibitor, GDI {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: GDI-like N domain
domain: Guanine nucleotide dissociation inhibitor, GDI
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=89.13  E-value=0.21  Score=33.63  Aligned_cols=31  Identities=16%  Similarity=0.176  Sum_probs=26.7

Q ss_pred             EEEecCCchHHHHHHHHHHHcCCEEEEEeCCH
Q 028523           22 VFVSAASGAVGQLVGQFAKLVGCYVVGSAGSK   53 (208)
Q Consensus        22 vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~   53 (208)
                      |+|.|| |..|+.++..+...|.+|.++.+++
T Consensus         8 viViGa-G~~Gl~~A~~La~~G~~V~vlE~~~   38 (297)
T d2bcgg1           8 VIVLGT-GITECILSGLLSVDGKKVLHIDKQD   38 (297)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCCEEEEcCCC
Confidence            678895 9999998888888899999999764

>d1i8ta1 c.4.1.3 (A:1-244,A:314-367) UDP-galactopyranose mutase, N-terminal domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: UDP-galactopyranose mutase, N-terminal domain
domain: UDP-galactopyranose mutase, N-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=88.96  E-value=0.17  Score=35.89  Aligned_cols=31  Identities=13%  Similarity=0.125  Sum_probs=27.2

Q ss_pred             EEEecCCchHHHHHHHHHHHcCCEEEEEeCCH
Q 028523           22 VFVSAASGAVGQLVGQFAKLVGCYVVGSAGSK   53 (208)
Q Consensus        22 vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~   53 (208)
                      |+|.|| |..|+.++..+...|.+|.+...++
T Consensus         4 v~IIGa-G~sGl~~A~~L~~~g~~V~iiEk~~   34 (298)
T d1i8ta1           4 YIIVGS-GLFGAVCANELKKLNKKVLVIEKRN   34 (298)
T ss_dssp             EEEECC-SHHHHHHHHHHGGGTCCEEEECSSS
T ss_pred             EEEECC-cHHHHHHHHHHHhCCCcEEEEECCC
Confidence            789996 9999999999888899999998654

>d1vdca1 c.3.1.5 (A:1-117,A:244-316) Thioredoxin reductase {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Thioredoxin reductase
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=88.86  E-value=0.23  Score=32.60  Aligned_cols=32  Identities=9%  Similarity=0.061  Sum_probs=27.0

Q ss_pred             CEEEEecCCchHHHHHHHHHHHcCCEEEEEeCC
Q 028523           20 EYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGS   52 (208)
Q Consensus        20 ~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s   52 (208)
                      ..|+|.|| |+.|+.++..+...|.+++++...
T Consensus         6 ~~VvIIGg-GpaGl~aA~~~ar~g~~v~vie~~   37 (192)
T d1vdca1           6 TRLCIVGS-GPAAHTAAIYAARAELKPLLFEGW   37 (192)
T ss_dssp             EEEEEECC-SHHHHHHHHHHHHTTCCCEEECCS
T ss_pred             ceEEEECC-CHHHHHHHHHHHHcCCcEEEEEee
Confidence            46899996 999999988888899998888743

>d1y7la1 c.79.1.1 (A:2-311) O-acetylserine sulfhydrylase (Cysteine synthase) {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: O-acetylserine sulfhydrylase (Cysteine synthase)
species: Haemophilus influenzae [TaxId: 727]

Probab=88.81  E-value=2.8  Score=29.51  Aligned_cols=52  Identities=17%  Similarity=0.213  Sum_probs=35.1

Q ss_pred             cCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCC---HHHHHHHHHhcCCCe
Q 028523           14 CSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGS---KDKVDLLKNKFGFDE   67 (208)
Q Consensus        14 ~~~~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s---~~~~~~~~~~~g~~~   67 (208)
                      +.+.+++.|+.. .+|.-|++++-.|+.+|.+.+++...   +.+.+.++ .+|+..
T Consensus        56 g~~~~~~~vv~~-SsGN~g~a~A~~a~~~G~~~~i~~p~~~~~~k~~~~~-~~GA~v  110 (310)
T d1y7la1          56 GTLTKGKEIVDA-TSGNTGIALAYVAAARGYKITLTMPETMSLERKRLLC-GLGVNL  110 (310)
T ss_dssp             TSSCTTCEEEES-CCSHHHHHHHHHHHHHTCCEEEEEETTSCHHHHHHHH-HTTCEE
T ss_pred             CCCCCCceeeee-cCCCchHHHHHHHHHhhccccccchhhhhhhhhhhHH-HhCCce
Confidence            456777766554 47999999999999999865544422   33455555 677643

>d1ne2a_ c.66.1.32 (A:) Hypothetical protein Ta1320 {Archaeon Thermoplasma acidophilum [TaxId: 2303]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Ta1320-like
domain: Hypothetical protein Ta1320
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

Probab=88.64  E-value=2.2  Score=28.08  Aligned_cols=72  Identities=18%  Similarity=0.171  Sum_probs=44.4

Q ss_pred             HhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHHHHhHCCCCcc
Q 028523           12 EVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGC-YVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGIN   90 (208)
Q Consensus        12 ~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g~-~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~d   90 (208)
                      ..+++ .|++||=.|+ | .|..++. +...|+ +|++++.+++..+.+++......++..    ++    .+ .++.||
T Consensus        43 ~~~dl-~Gk~VLDlGc-G-tG~l~i~-a~~~ga~~V~~vDid~~a~~~ar~N~~~~~~~~~----D~----~~-l~~~fD  109 (197)
T d1ne2a_          43 NDGNI-GGRSVIDAGT-G-NGILACG-SYLLGAESVTAFDIDPDAIETAKRNCGGVNFMVA----DV----SE-ISGKYD  109 (197)
T ss_dssp             HHTSS-BTSEEEEETC-T-TCHHHHH-HHHTTBSEEEEEESCHHHHHHHHHHCTTSEEEEC----CG----GG-CCCCEE
T ss_pred             HcCCC-CCCEEEEeCC-C-CcHHHHH-HHHcCCCcccccccCHHHHHHHHHccccccEEEE----eh----hh-cCCcce
Confidence            33455 5899998884 2 3544444 444666 899999999988888854433333332    22    11 234799


Q ss_pred             EEEeCC
Q 028523           91 IYFENV   96 (208)
Q Consensus        91 ~v~d~~   96 (208)
                      +||-..
T Consensus       110 ~Vi~NP  115 (197)
T d1ne2a_         110 TWIMNP  115 (197)
T ss_dssp             EEEECC
T ss_pred             EEEeCc
Confidence            998643

>d1yzha1 c.66.1.53 (A:8-211) tRNA (guanine-N(7)-)-methyltransferase TrmB {Streptococcus pneumoniae [TaxId: 1313]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: TrmB-like
domain: tRNA (guanine-N(7)-)-methyltransferase TrmB
species: Streptococcus pneumoniae [TaxId: 1313]

Probab=88.47  E-value=1.6  Score=28.91  Aligned_cols=92  Identities=18%  Similarity=0.220  Sum_probs=59.4

Q ss_pred             CCEEEEecCCchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHH---hcCCCe--eEecCCCccHHHHHHhHCC-CCccE
Q 028523           19 GEYVFVSAASGAVGQLVGQFAKLV-GCYVVGSAGSKDKVDLLKN---KFGFDE--AFNYKEEPDLDAALKRYFP-EGINI   91 (208)
Q Consensus        19 g~~vli~ga~g~vG~~a~qla~~~-g~~v~~~~~s~~~~~~~~~---~~g~~~--v~~~~~~~~~~~~~~~~~~-~~~d~   91 (208)
                      +..||=.|  .|.|..++.+|+.. ..++++++.++.....+.+   +.+...  ++..+-. ++    .+..+ +.+|.
T Consensus        32 ~plvLdIG--cG~G~~~~~lA~~~p~~~~iGid~~~~~v~~a~~~~~~~~l~Ni~~~~~da~-~l----~~~~~~~~~~~  104 (204)
T d1yzha1          32 NPIHVEVG--SGKGAFVSGMAKQNPDINYIGIDIQKSVLSYALDKVLEVGVPNIKLLWVDGS-DL----TDYFEDGEIDR  104 (204)
T ss_dssp             CCEEEEES--CTTSHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCCSSEEEEECCSS-CG----GGTSCTTCCSE
T ss_pred             CCeEEEEe--ccCCHHHHHHHHHCCCCceEEEeccHHHHHHHHHhhhhhccccceeeecCHH-HH----hhhccCCceeh
Confidence            34556556  56799999999987 6799999999886665532   445542  3322211 22    22223 36787


Q ss_pred             EEeCCC---------------chhHHHHHHhhccCCEEEEE
Q 028523           92 YFENVG---------------GKMLDAVLLNMRIQGRITLC  117 (208)
Q Consensus        92 v~d~~g---------------~~~~~~~~~~l~~~G~~v~~  117 (208)
                      |+-...               .+.+....+.|++||.+...
T Consensus       105 i~i~fPdPw~K~~h~krRl~~~~~l~~~~~~LkpgG~l~i~  145 (204)
T d1yzha1         105 LYLNFSDPWPKKRHEKRRLTYKTFLDTFKRILPENGEIHFK  145 (204)
T ss_dssp             EEEESCCCCCSGGGGGGSTTSHHHHHHHHHHSCTTCEEEEE
T ss_pred             hcccccccccchhhhhhhhhHHHHHHHHHHhCCCCcEEEEE
Confidence            765443               23577888999999998764

>d1y0pa2 c.3.1.4 (A:111-361,A:512-568) Flavocytochrome c3 (respiratory fumarate reductase) {Shewanella frigidimarina [TaxId: 56812]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain
domain: Flavocytochrome c3 (respiratory fumarate reductase)
species: Shewanella frigidimarina [TaxId: 56812]

Probab=88.36  E-value=0.24  Score=34.97  Aligned_cols=30  Identities=23%  Similarity=0.162  Sum_probs=26.3

Q ss_pred             EEEecCCchHHHHHHHHHHHcCCEEEEEeCC
Q 028523           22 VFVSAASGAVGQLVGQFAKLVGCYVVGSAGS   52 (208)
Q Consensus        22 vli~ga~g~vG~~a~qla~~~g~~v~~~~~s   52 (208)
                      |+|.|+ |..|++++.-+...|++|+++...
T Consensus        19 VlVIG~-G~aGl~aA~~la~~G~~V~lvEK~   48 (308)
T d1y0pa2          19 VVVVGS-GGAGFSAAISATDSGAKVILIEKE   48 (308)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEECSS
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCcEEEEecC
Confidence            788895 999999988888899999998854

>d1o58a_ c.79.1.1 (A:) O-acetylserine sulfhydrylase (Cysteine synthase) {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: O-acetylserine sulfhydrylase (Cysteine synthase)
species: Thermotoga maritima [TaxId: 2336]

Probab=88.28  E-value=2.9  Score=29.13  Aligned_cols=44  Identities=23%  Similarity=0.303  Sum_probs=31.4

Q ss_pred             EEecCCchHHHHHHHHHHHcCCEEEEEe---CCHHHHHHHHHhcCCCe
Q 028523           23 FVSAASGAVGQLVGQFAKLVGCYVVGSA---GSKDKVDLLKNKFGFDE   67 (208)
Q Consensus        23 li~ga~g~vG~~a~qla~~~g~~v~~~~---~s~~~~~~~~~~~g~~~   67 (208)
                      ++...+|.-|.+++..|+.+|.+.+++.   .++.+.+.++ .+|+.-
T Consensus        58 vv~~SsGN~g~a~A~~a~~~g~~~~i~~p~~~~~~k~~~~~-~~GA~V  104 (293)
T d1o58a_          58 IVEPTSGNMGIAIAMIGAKRGHRVILTMPETMSVERRKVLK-MLGAEL  104 (293)
T ss_dssp             EEEECSSHHHHHHHHHHHHHTCCEEEEEETTSCHHHHHHHH-HTTCEE
T ss_pred             eEEecCcchhhHHHHhhhhccceeEeeccccccHHHeeccc-cCCcEE
Confidence            5666689999999999999998544443   2344666666 777753

>d2nvwa1 c.2.1.3 (A:2-154,A:374-457) Galactose/lactose metabolism regulatory protein GAL80 {Yeast (Kluyveromyces lactis) [TaxId: 28985]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Galactose/lactose metabolism regulatory protein GAL80
species: Yeast (Kluyveromyces lactis) [TaxId: 28985]

Probab=88.01  E-value=2.6  Score=28.33  Aligned_cols=93  Identities=10%  Similarity=-0.017  Sum_probs=56.5

Q ss_pred             EEEEecCCch----HHHHHHHHHHHc--CCEEEEEe-CCHHHHHHHHHhcCCCeeEecCCCccHHHHHHhHCCCCccEEE
Q 028523           21 YVFVSAASGA----VGQLVGQFAKLV--GCYVVGSA-GSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYF   93 (208)
Q Consensus        21 ~vli~ga~g~----vG~~a~qla~~~--g~~v~~~~-~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~d~v~   93 (208)
                      +|.|.|. |.    ++...+...+..  ++++++++ ++.++.+.+.++++....-.|.   ++.+.+.   ...+|+|+
T Consensus        18 rvgiIG~-G~~~~~~~~~h~~ai~~~~~~~~ivav~d~~~~~~~~~~~~~~~~~~~~~~---~~~~l~~---~~~iD~V~   90 (237)
T d2nvwa1          18 RVGFVGL-TSGKSWVAKTHFLAIQQLSSQFQIVALYNPTLKSSLQTIEQLQLKHATGFD---SLESFAQ---YKDIDMIV   90 (237)
T ss_dssp             EEEEECC-CSTTSHHHHTHHHHHHHTTTTEEEEEEECSCHHHHHHHHHHTTCTTCEEES---CHHHHHH---CTTCSEEE
T ss_pred             EEEEEec-CccccHHHHHHHHHHHhcCCCeEEEEEEcCCHHHHHHHHHhcccccceeec---chhhccc---ccccceee
Confidence            6789995 44    444444445543  56888654 5555655555488765433333   4554443   23699999


Q ss_pred             eCCCc-hhHHHHHHhhccC-----CEEEEEecc
Q 028523           94 ENVGG-KMLDAVLLNMRIQ-----GRITLCGMI  120 (208)
Q Consensus        94 d~~g~-~~~~~~~~~l~~~-----G~~v~~g~~  120 (208)
                      .|+.. ...+....+|..|     +.-+.+.-+
T Consensus        91 i~tp~~~h~~~~~~al~aG~~~~~~k~V~~EKP  123 (237)
T d2nvwa1          91 VSVKVPEHYEVVKNILEHSSQNLNLRYLYVEWA  123 (237)
T ss_dssp             ECSCHHHHHHHHHHHHHHSSSCSSCCEEEEESS
T ss_pred             ccCCCcchhhHHHHHHHhcccccCCceEEEecc
Confidence            99984 5677777777765     344565443

>d3grsa1 c.3.1.5 (A:18-165,A:291-363) Glutathione reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=88.00  E-value=0.35  Score=32.23  Aligned_cols=30  Identities=17%  Similarity=0.134  Sum_probs=26.2

Q ss_pred             EEEecCCchHHHHHHHHHHHcCCEEEEEeCC
Q 028523           22 VFVSAASGAVGQLVGQFAKLVGCYVVGSAGS   52 (208)
Q Consensus        22 vli~ga~g~vG~~a~qla~~~g~~v~~~~~s   52 (208)
                      ++|.|+ |+.|+.++..+...|.+|.++...
T Consensus         6 viIIG~-GpaG~~aA~~aar~G~kV~vIEk~   35 (221)
T d3grsa1           6 YLVIGG-GSGGLASARRAAELGARAAVVESH   35 (221)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEEESS
T ss_pred             EEEECC-CHHHHHHHHHHHHCCCEEEEEecc
Confidence            577885 999999999999999999999743

>d3lada1 c.3.1.5 (A:1-158,A:278-348) Dihydrolipoamide dehydrogenase {Azotobacter vinelandii [TaxId: 354]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Azotobacter vinelandii [TaxId: 354]

Probab=87.85  E-value=0.3  Score=32.56  Aligned_cols=30  Identities=20%  Similarity=0.107  Sum_probs=26.0

Q ss_pred             EEEecCCchHHHHHHHHHHHcCCEEEEEeCC
Q 028523           22 VFVSAASGAVGQLVGQFAKLVGCYVVGSAGS   52 (208)
Q Consensus        22 vli~ga~g~vG~~a~qla~~~g~~v~~~~~s   52 (208)
                      |+|.|| |+.|+.++..+...|.+|.++...
T Consensus         6 viIIGg-GpAGl~aA~~aar~G~~V~viE~~   35 (229)
T d3lada1           6 VIVIGA-GPGGYVAAIKSAQLGLKTALIEKY   35 (229)
T ss_dssp             EEEECC-SHHHHHHHHHHHHHTCCEEEEECC
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCeEEEEecc
Confidence            677886 999999999999999999999753

>d1zn7a1 c.61.1.1 (A:3-180) Adenine PRTase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: PRTase-like
superfamily: PRTase-like
family: Phosphoribosyltransferases (PRTases)
domain: Adenine PRTase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=87.85  E-value=0.7  Score=30.05  Aligned_cols=36  Identities=17%  Similarity=0.182  Sum_probs=29.8

Q ss_pred             CCCCCCEEEEec---CCchHHHHHHHHHHHcCCEEEEEe
Q 028523           15 SPKQGEYVFVSA---ASGAVGQLVGQFAKLVGCYVVGSA   50 (208)
Q Consensus        15 ~~~~g~~vli~g---a~g~vG~~a~qla~~~g~~v~~~~   50 (208)
                      .+.+|++|||.-   +||+.-.+++++++..|++|+.+.
T Consensus       114 ~i~~g~rVlIVDDviaTGgT~~a~~~ll~~~Ga~vvg~~  152 (178)
T d1zn7a1         114 ALEPGQRVVVVDDLLATGGTMNAACELLGRLQAEVLECV  152 (178)
T ss_dssp             SSCTTCEEEEEEEEESSSHHHHHHHHHHHHTTCEEEEEE
T ss_pred             cccCCCeEEEehhhhhhchHHHHHHHHHHHCCCEEEEEE
Confidence            467899999763   689999999999999999876433

>d2v5za1 c.3.1.2 (A:6-289,A:402-500) Monoamine oxidase B {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Monoamine oxidase B
species: Human (Homo sapiens) [TaxId: 9606]

Probab=87.83  E-value=0.26  Score=35.12  Aligned_cols=31  Identities=23%  Similarity=0.222  Sum_probs=26.7

Q ss_pred             EEEecCCchHHHHHHHHHHHcCCEEEEEeCCH
Q 028523           22 VFVSAASGAVGQLVGQFAKLVGCYVVGSAGSK   53 (208)
Q Consensus        22 vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~   53 (208)
                      |+|+|| |..|+.++..++..|.+|++...++
T Consensus         2 ViVIGa-G~aGL~aA~~L~~~G~~V~VlE~~~   32 (383)
T d2v5za1           2 VVVVGG-GISGMAAAKLLHDSGLNVVVLEARD   32 (383)
T ss_dssp             EEEECC-BHHHHHHHHHHHHTTCCEEEEESSS
T ss_pred             EEEECC-CHHHHHHHHHHHhCCCCEEEEecCC
Confidence            678896 9999999988888999999998543

>d2fy8a1 c.2.1.9 (A:116-244) Potassium channel-related protein MthK {Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Potassium channel-related protein MthK
species: Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]

Probab=87.76  E-value=1.1  Score=27.02  Aligned_cols=60  Identities=13%  Similarity=0.092  Sum_probs=46.5

Q ss_pred             HhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC--EEEEEeCCHHHHHHHHHhcCCCeeEecC
Q 028523           12 EVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGC--YVVGSAGSKDKVDLLKNKFGFDEAFNYK   72 (208)
Q Consensus        12 ~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g~--~v~~~~~s~~~~~~~~~~~g~~~v~~~~   72 (208)
                      +.+++..-+.+++.-.....-+.++..+|.+..  ++++.+.+++..+.++ ..|++.++++.
T Consensus        56 ~~a~i~~A~~vi~~~~~d~~n~~~~~~~r~~~~~~~iia~~~~~~~~~~l~-~~G~d~vi~p~  117 (129)
T d2fy8a1          56 EKANVRGARAVIVNLESDSETIHCILGIRKIDESVRIIAEAERYENIEQLR-MAGADQVISPF  117 (129)
T ss_dssp             HHTTCTTCSEEEECCSSHHHHHHHHHHHHHHCSSSCEEEECSSGGGHHHHH-HHHCSEEECHH
T ss_pred             HHhhhhcCcEEEEeccchhhhHHHHHHHHHHCCCceEEEEEcCHHHHHHHH-HCCCCEEEChH
Confidence            446788888888776556666778888887743  7888888888888898 89999888543

>d3cmco1 c.2.1.3 (O:0-148,O:313-333) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Bacillus stearothermophilus, nca 1503 [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Bacillus stearothermophilus, nca 1503 [TaxId: 1422]

Probab=87.65  E-value=2  Score=27.58  Aligned_cols=94  Identities=17%  Similarity=0.111  Sum_probs=55.4

Q ss_pred             EEEEecCCchHHHHHHHHHHHc-CCEEEEEeCC--HHHHHHHHHhcCCC--------------------eeEecCCCccH
Q 028523           21 YVFVSAASGAVGQLVGQFAKLV-GCYVVGSAGS--KDKVDLLKNKFGFD--------------------EAFNYKEEPDL   77 (208)
Q Consensus        21 ~vli~ga~g~vG~~a~qla~~~-g~~v~~~~~s--~~~~~~~~~~~g~~--------------------~v~~~~~~~~~   77 (208)
                      +|.|.| -|-+|.++.+.+... ..+++++-..  .+...++- ++...                    .+.-+++. +.
T Consensus         3 kIgING-fGRIGR~v~R~~l~~~~~~ivaINd~~d~~~~ayll-~yDS~hG~~~~~v~~~~~~l~i~g~~i~i~~~~-~p   79 (171)
T d3cmco1           3 KVGING-FGRIGRNVFRAALKNPDIEVVAVNDLTDANTLAHLL-KYDSVHGRLDAEVSVNGNNLVVNGKEIIVKAER-DP   79 (171)
T ss_dssp             EEEEES-CSHHHHHHHHHHTTCTTEEEEEEECSSCHHHHHHHH-HEETTTEECSSCEEEETTEEEETTEEEEEECCS-SG
T ss_pred             EEEEEC-CCHHHHHHHHHHhhCCCcEEEEEcCCCCHHHHhhhh-cccccCCcccccccccCCCEEeCCcceeeEecC-CH
Confidence            578888 699999998777543 4577766533  33444444 32110                    01001111 11


Q ss_pred             HHHHHhHCCC--CccEEEeCCC-chhHHHHHHhhccCCEEEEEeccc
Q 028523           78 DAALKRYFPE--GINIYFENVG-GKMLDAVLLNMRIQGRITLCGMIS  121 (208)
Q Consensus        78 ~~~~~~~~~~--~~d~v~d~~g-~~~~~~~~~~l~~~G~~v~~g~~~  121 (208)
                          .+.-.+  ++|+|+||+| ....+.+...|..|-.-|.+..+.
T Consensus        80 ----~~i~W~~~~vDiViEcTG~f~t~~~~~~hl~~gakkViiSap~  122 (171)
T d3cmco1          80 ----ENLAWGEIGVDIVVESTGRFTKREDAAKHLEAGAKKVIISAPA  122 (171)
T ss_dssp             ----GGCCTGGGTCCEEEECSSSCCBHHHHTHHHHTTCSEEEESSCC
T ss_pred             ----HHccccccCCcEEEEecCccCCHHHHHHHHhCCCceEEEeccc
Confidence                111222  7999999999 567778888888876556665543

>d1gy8a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Trypanosoma brucei [TaxId: 5691]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Trypanosoma brucei [TaxId: 5691]

Probab=87.65  E-value=0.39  Score=35.07  Aligned_cols=31  Identities=19%  Similarity=0.170  Sum_probs=25.7

Q ss_pred             CEEEEecCCchHHHHHHH-HHHHcCCEEEEEe
Q 028523           20 EYVFVSAASGAVGQLVGQ-FAKLVGCYVVGSA   50 (208)
Q Consensus        20 ~~vli~ga~g~vG~~a~q-la~~~g~~v~~~~   50 (208)
                      =+|||+||+|-+|...+. |++..|.+|++++
T Consensus         3 MKVLITG~tGfIGs~lv~~LL~~~~~~V~~~D   34 (383)
T d1gy8a_           3 MRVLVCGGAGYIGSHFVRALLRDTNHSVVIVD   34 (383)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHCCCEEEEEE
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHhCCCEEEEEe
Confidence            469999999999987665 5567889999886

>d1aoga2 c.3.1.5 (A:170-286) Trypanothione reductase {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Trypanothione reductase
species: Trypanosoma cruzi [TaxId: 5693]

Probab=87.52  E-value=0.51  Score=28.17  Aligned_cols=36  Identities=8%  Similarity=-0.031  Sum_probs=27.6

Q ss_pred             CCCCEEEEecCCchHHHHHHHHHHHcC---CEEEEEeCCH
Q 028523           17 KQGEYVFVSAASGAVGQLVGQFAKLVG---CYVVGSAGSK   53 (208)
Q Consensus        17 ~~g~~vli~ga~g~vG~~a~qla~~~g---~~v~~~~~s~   53 (208)
                      +.+++++|.|| |.+|.-++..+..+|   .+|.++.+++
T Consensus        18 ~~p~~v~ivGg-G~ig~E~A~~l~~l~~~~~~Vtli~~~~   56 (117)
T d1aoga2          18 EPPRRVLTVGG-GFISVEFAGIFNAYKPKDGQVTLCYRGE   56 (117)
T ss_dssp             SCCSEEEEECS-SHHHHHHHHHHHHHCCTTCEEEEEESSS
T ss_pred             hcCCeEEEECC-cHHHHHHHHHhhhcccCCcEEEEEeccc
Confidence            34579999996 999999887777665   4688887553

>d1ryia1 c.3.1.2 (A:1-218,A:307-364) Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Glycine oxidase ThiO
species: Bacillus sp. [TaxId: 1409]

Probab=87.51  E-value=0.3  Score=33.70  Aligned_cols=30  Identities=10%  Similarity=0.098  Sum_probs=26.1

Q ss_pred             EEEecCCchHHHHHHHHHHHcCCEEEEEeCC
Q 028523           22 VFVSAASGAVGQLVGQFAKLVGCYVVGSAGS   52 (208)
Q Consensus        22 vli~ga~g~vG~~a~qla~~~g~~v~~~~~s   52 (208)
                      |+|.|| |.+|++++--+...|.+|+++.+.
T Consensus         7 vvIIGa-Gi~Gls~A~~La~~G~~V~vlE~~   36 (276)
T d1ryia1           7 AVVIGG-GIIGSAIAYYLAKENKNTALFESG   36 (276)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEECSS
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCcEEEEeCC
Confidence            788896 999999887777789999999865

>d2csua3 c.23.4.1 (A:291-453) Acetate-CoA ligase alpha chain, AcdA, domains 2 and 3 {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: Succinyl-CoA synthetase domains
family: Succinyl-CoA synthetase domains
domain: Acetate-CoA ligase alpha chain, AcdA, domains 2 and 3
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=87.50  E-value=2.2  Score=26.83  Aligned_cols=45  Identities=16%  Similarity=0.224  Sum_probs=36.9

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcC
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFG   64 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g   64 (208)
                      +|++|.|.+.+||.|.+++..+...|.++  ..-+++..+.+++.+.
T Consensus         2 ~G~rvaiit~sGG~~~l~aD~~~~~Gl~l--~~l~~~t~~~L~~~lp   46 (163)
T d2csua3           2 RGNKVAIMTNAGGPGVLTADELDKRGLKL--ATLEEKTIEELRSFLP   46 (163)
T ss_dssp             SSSEEEEEESCHHHHHHHHHHHHTTTCEE--CCCCHHHHHHHHHHSC
T ss_pred             CCCeEEEEECChHHHHHHHHHHHHcCCcc--CCCCHHHHHHHHHhCC
Confidence            68999999999999999999999999766  4457788888884443

>d1mv8a2 c.2.1.6 (A:1-202) GDP-mannose 6-dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: GDP-mannose 6-dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=87.49  E-value=0.71  Score=30.50  Aligned_cols=39  Identities=26%  Similarity=0.340  Sum_probs=33.8

Q ss_pred             EEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH
Q 028523           21 YVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLK   60 (208)
Q Consensus        21 ~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~   60 (208)
                      +|.|+| .|-+|+..+..+...|.+|++.+.++++.+.+.
T Consensus         2 kI~ViG-lG~vGl~~a~~la~~g~~V~g~D~n~~~i~~ln   40 (202)
T d1mv8a2           2 RISIFG-LGYVGAVCAGCLSARGHEVIGVDVSSTKIDLIN   40 (202)
T ss_dssp             EEEEEC-CSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHH
T ss_pred             EEEEEC-CCHhHHHHHHHHHhCCCcEEEEeCCHHHHHHhc
Confidence            477888 599999988888888999999999988888776

>d1qo8a2 c.3.1.4 (A:103-359,A:506-565) Flavocytochrome c3 (respiratory fumarate reductase) {Shewanella frigidimarina [TaxId: 56812]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain
domain: Flavocytochrome c3 (respiratory fumarate reductase)
species: Shewanella frigidimarina [TaxId: 56812]

Probab=87.14  E-value=0.3  Score=34.80  Aligned_cols=30  Identities=30%  Similarity=0.293  Sum_probs=26.3

Q ss_pred             EEEecCCchHHHHHHHHHHHcCCEEEEEeCC
Q 028523           22 VFVSAASGAVGQLVGQFAKLVGCYVVGSAGS   52 (208)
Q Consensus        22 vli~ga~g~vG~~a~qla~~~g~~v~~~~~s   52 (208)
                      |+|.|+ |..|+.++.-+...|++|+++...
T Consensus        22 VvVIGa-G~aGl~AA~~aa~~G~~V~vlEK~   51 (317)
T d1qo8a2          22 VLVVGA-GSAGFNASLAAKKAGANVILVDKA   51 (317)
T ss_dssp             EEEECC-SHHHHHHHHHHHHHTCCEEEECSS
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCcEEEEeCC
Confidence            788895 999999988888889999999854

>d2gv8a1 c.3.1.5 (A:3-180,A:288-444) Flavin-dependent monoxygenase SPBP16F5.08c {Schizosaccharomyces pombe [TaxId: 4896]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavin-dependent monoxygenase SPBP16F5.08c
species: Schizosaccharomyces pombe [TaxId: 4896]

Probab=86.90  E-value=0.35  Score=34.68  Aligned_cols=33  Identities=12%  Similarity=-0.026  Sum_probs=25.8

Q ss_pred             CEEEEecCCchHHHHHHHHHHHcC--CEEEEEeCCH
Q 028523           20 EYVFVSAASGAVGQLVGQFAKLVG--CYVVGSAGSK   53 (208)
Q Consensus        20 ~~vli~ga~g~vG~~a~qla~~~g--~~v~~~~~s~   53 (208)
                      ++|+|.|| |..|++++..++..|  .+|++..+++
T Consensus         5 KrVaIIGa-G~sGl~~A~~L~~~~~~~~v~vfEk~~   39 (335)
T d2gv8a1           5 RKIAIIGA-GPSGLVTAKALLAEKAFDQVTLFERRG   39 (335)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHTTTCCSEEEEECSSS
T ss_pred             CeEEEECc-CHHHHHHHHHHHHhCCCCCEEEEECCC
Confidence            57999996 999998886655444  5899988764

>d1cjca2 c.4.1.1 (A:6-106,A:332-460) Adrenodoxin reductase of mitochondrial p450 systems {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Adrenodoxin reductase of mitochondrial p450 systems
species: Cow (Bos taurus) [TaxId: 9913]

Probab=86.74  E-value=0.44  Score=31.98  Aligned_cols=34  Identities=15%  Similarity=-0.024  Sum_probs=26.3

Q ss_pred             CEEEEecCCchHHHHHHHHHHH--cCCEEEEEeCCHH
Q 028523           20 EYVFVSAASGAVGQLVGQFAKL--VGCYVVGSAGSKD   54 (208)
Q Consensus        20 ~~vli~ga~g~vG~~a~qla~~--~g~~v~~~~~s~~   54 (208)
                      .+|.|.|| |+.|+.+++.++.  .|.+|++....+.
T Consensus         2 ~kv~iIGa-GpaGl~aA~~L~~~~~~~~V~v~e~~~~   37 (230)
T d1cjca2           2 PQICVVGS-GPAGFYTAQHLLKHHSRAHVDIYEKQLV   37 (230)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHCSSCEEEEECSSSS
T ss_pred             CeEEEECc-cHHHHHHHHHHHhcCCCCeEEEEeCCCC
Confidence            37899996 9999999876544  4779999886653

>d1h6va1 c.3.1.5 (A:10-170,A:293-366) Mammalian thioredoxin reductase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Mammalian thioredoxin reductase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=86.50  E-value=0.32  Score=32.81  Aligned_cols=29  Identities=14%  Similarity=0.012  Sum_probs=25.7

Q ss_pred             EEEecCCchHHHHHHHHHHHcCCEEEEEeC
Q 028523           22 VFVSAASGAVGQLVGQFAKLVGCYVVGSAG   51 (208)
Q Consensus        22 vli~ga~g~vG~~a~qla~~~g~~v~~~~~   51 (208)
                      |+|.|| |+.|+.++..+...|.+|.++..
T Consensus         6 viVIG~-GpaGl~aA~~aa~~G~kV~viE~   34 (235)
T d1h6va1           6 LIIIGG-GSGGLAAAKEAAKFDKKVMVLDF   34 (235)
T ss_dssp             EEEECC-SHHHHHHHHHHGGGCCCEEEECC
T ss_pred             EEEECC-CHHHHHHHHHHHHCCCeEEEEec
Confidence            678895 99999999999999999999974

>d2g72a1 c.66.1.15 (A:18-280) Phenylethanolamine N-methyltransferase, PNMTase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arylamine N-methyltransferase
domain: Phenylethanolamine N-methyltransferase, PNMTase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=86.41  E-value=0.34  Score=33.59  Aligned_cols=48  Identities=8%  Similarity=-0.197  Sum_probs=32.5

Q ss_pred             CCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcC
Q 028523           15 SPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFG   64 (208)
Q Consensus        15 ~~~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g   64 (208)
                      ...+|.++|=.|. |+ |...+-.+.....+|++++.|+.-.+.+++.+.
T Consensus        51 g~~~g~~vLDiGc-G~-g~~~~~~~~~~~~~v~~~D~S~~~i~~~~~~~~   98 (263)
T d2g72a1          51 GEVSGRTLIDIGS-GP-TVYQLLSACSHFEDITMTDFLEVNRQELGRWLQ   98 (263)
T ss_dssp             SCSCCSEEEEETC-TT-CCGGGTTGGGGCSEEEEECSCHHHHHHHHHHHT
T ss_pred             CCCCCcEEEEecc-CC-CHHHHHHhcccCCeEEEEeCCHHHHHHHHHHHh
Confidence            4457889998885 33 433333333445599999999998888875443

>d1ps9a2 c.3.1.1 (A:466-627) 2,4-dienoyl-CoA reductase, C-terminal domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: C-terminal domain of adrenodoxin reductase-like
domain: 2,4-dienoyl-CoA reductase, C-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=86.24  E-value=0.33  Score=30.77  Aligned_cols=42  Identities=12%  Similarity=0.091  Sum_probs=32.9

Q ss_pred             hhHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEE
Q 028523            4 MTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVG   48 (208)
Q Consensus         4 ~tA~~~l~~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~   48 (208)
                      .+|+..|.  .....|++|+|.|| |.+|.-++..+...|++++.
T Consensus        16 ~~a~d~L~--~~~~~gkrVvVIGg-G~~g~d~a~~~~r~G~~~~~   57 (162)
T d1ps9a2          16 LSYLDVLR--DKAPVGNKVAIIGC-GGIGFDTAMYLSQPGESTSQ   57 (162)
T ss_dssp             EEHHHHHT--SCCCCCSEEEEECC-HHHHHHHHHHHTCCSSCGGG
T ss_pred             EEHHHHhh--CccccCCceEEEcC-chhHHHHHHHHHHcCCccce
Confidence            45666663  46778999999997 99999999999999985543

>d2gf3a1 c.3.1.2 (A:1-217,A:322-385) Sarcosine oxidase {Bacillus sp., strain b0618 [TaxId: 1409]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Sarcosine oxidase
species: Bacillus sp., strain b0618 [TaxId: 1409]

Probab=86.01  E-value=0.4  Score=33.19  Aligned_cols=30  Identities=23%  Similarity=0.212  Sum_probs=25.9

Q ss_pred             EEEecCCchHHHHHHHHHHHcCCEEEEEeCC
Q 028523           22 VFVSAASGAVGQLVGQFAKLVGCYVVGSAGS   52 (208)
Q Consensus        22 vli~ga~g~vG~~a~qla~~~g~~v~~~~~s   52 (208)
                      |+|.|| |.+|++++.-+...|.+|+++.+.
T Consensus         6 vvIIGa-Gi~Gls~A~~La~~G~~V~viE~~   35 (281)
T d2gf3a1           6 VIVVGA-GSMGMAAGYQLAKQGVKTLLVDAF   35 (281)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEECSS
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCcEEEEeCC
Confidence            788896 999999888877789999999864

>d1a9xa3 c.30.1.1 (A:1-127) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains
species: Escherichia coli [TaxId: 562]

Probab=85.86  E-value=1  Score=27.41  Aligned_cols=85  Identities=14%  Similarity=0.168  Sum_probs=47.8

Q ss_pred             CCCEEEEecCCch-----------HHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHHHHhHCC
Q 028523           18 QGEYVFVSAASGA-----------VGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFP   86 (208)
Q Consensus        18 ~g~~vli~ga~g~-----------vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~   86 (208)
                      .-++|||.|+ |+           .+..++..+|..|++++.+..+++....-. .. +|+++-  ++ -..+.+.+...
T Consensus         6 ~~kkvlilGs-Gp~~IGq~~EfDy~~~~a~~alke~g~~~iliN~NP~TVstd~-d~-aD~lYf--eP-lt~e~v~~Ii~   79 (127)
T d1a9xa3           6 DIKSILILGA-GPIVIGQACEFDYSGAQACKALREEGYRVINVNSNPATIMTDP-EM-ADATYI--EP-IHWEVVRKIIE   79 (127)
T ss_dssp             SCCEEEEECC-CSCBTTBCTHHHHHHHHHHHHHHHHTCEEEEECSCTTCGGGCG-GG-SSEEEC--SC-CCHHHHHHHHH
T ss_pred             CCCEEEEECC-CcCcccccchhHHHHHHHHHHHHHcCCeEEEecCchHhhhcCh-hh-cceeee--ec-CCHHHHHHHHH
Confidence            4578999995 53           334445555667999999998887643221 11 344432  22 11222222222


Q ss_pred             -CCccEEEeCCCch-hHHHHHHhh
Q 028523           87 -EGINIYFENVGGK-MLDAVLLNM  108 (208)
Q Consensus        87 -~~~d~v~d~~g~~-~~~~~~~~l  108 (208)
                       +++|.|+-..|+. .++-+.++.
T Consensus        80 ~E~pd~il~~~GGQtalnla~~L~  103 (127)
T d1a9xa3          80 KERPDAVLPTMGGQTALNCALELE  103 (127)
T ss_dssp             HHCCSEEECSSSHHHHHHHHHHHH
T ss_pred             HhCcCCeEEEeeeehHhHHHHHHH
Confidence             2689999888875 444454443

>d1vl6a1 c.2.1.7 (A:155-376) Malate oxidoreductase (malic enzyme) {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Malate oxidoreductase (malic enzyme)
species: Thermotoga maritima [TaxId: 2336]

Probab=85.75  E-value=1.3  Score=29.84  Aligned_cols=44  Identities=20%  Similarity=0.146  Sum_probs=32.6

Q ss_pred             HHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCC
Q 028523            8 AGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGC-YVVGSAGS   52 (208)
Q Consensus         8 ~~l~~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g~-~v~~~~~s   52 (208)
                      .++.....--...+|+++|+ |..|...+++....+. +++.+++.
T Consensus        15 ~a~~~~g~~l~d~riv~~GA-GsAg~gia~~l~~~~~~~i~~~D~~   59 (222)
T d1vl6a1          15 NALKLTEKKIEEVKVVVNGI-GAAGYNIVKFLLDLGVKNVVAVDRK   59 (222)
T ss_dssp             HHHHHHTCCTTTCEEEEECC-SHHHHHHHHHHHHHTCCEEEEEETT
T ss_pred             HHHHHhCCChhhcEEEEECh-HHHHHHHHHHHHHhcccceEeecce
Confidence            33433344456788999996 9899888888888888 88888854

>d1d4ca2 c.3.1.4 (A:103-359,A:506-570) Flavocytochrome c3 (respiratory fumarate reductase) {Shewanella putrefaciens [TaxId: 24]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain
domain: Flavocytochrome c3 (respiratory fumarate reductase)
species: Shewanella putrefaciens [TaxId: 24]

Probab=85.74  E-value=0.37  Score=34.31  Aligned_cols=30  Identities=20%  Similarity=0.213  Sum_probs=26.2

Q ss_pred             EEEecCCchHHHHHHHHHHHcCCEEEEEeCC
Q 028523           22 VFVSAASGAVGQLVGQFAKLVGCYVVGSAGS   52 (208)
Q Consensus        22 vli~ga~g~vG~~a~qla~~~g~~v~~~~~s   52 (208)
                      |+|.|+ |..|+.++..+...|++|+++...
T Consensus        26 VvVIG~-G~aGl~aA~~la~~G~~V~llEk~   55 (322)
T d1d4ca2          26 VVIIGS-GGAGLAAAVSARDAGAKVILLEKE   55 (322)
T ss_dssp             EEEECS-SHHHHHHHHHHHTTTCCEEEECSS
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCcEEEEeCC
Confidence            788895 999999988888889999999854

>d1gtma1 c.2.1.7 (A:181-419) Glutamate dehydrogenase {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=85.71  E-value=1.5  Score=29.88  Aligned_cols=35  Identities=20%  Similarity=0.325  Sum_probs=29.1

Q ss_pred             CCCCEEEEecCCchHHHHHHHHH-HHcCCEEEEEeCC
Q 028523           17 KQGEYVFVSAASGAVGQLVGQFA-KLVGCYVVGSAGS   52 (208)
Q Consensus        17 ~~g~~vli~ga~g~vG~~a~qla-~~~g~~v~~~~~s   52 (208)
                      -+|.+|.|.| .|.||..+++++ +..|++|+.+..+
T Consensus        30 l~g~~v~IqG-fGnVG~~~a~~L~~~~G~kvv~vsD~   65 (239)
T d1gtma1          30 LKGKTIAIQG-YGNAGYYLAKIMSEDFGMKVVAVSDS   65 (239)
T ss_dssp             STTCEEEEEC-CSHHHHHHHHHHHHTTCCEEEEEECS
T ss_pred             cCCCEEEEEC-CCHHHHHHHHHHHHhcCcceeecccc
Confidence            4788999999 599999999876 4579999988755

>d1a9xa4 c.30.1.1 (A:556-676) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains
species: Escherichia coli [TaxId: 562]

Probab=85.70  E-value=0.55  Score=28.39  Aligned_cols=76  Identities=13%  Similarity=0.021  Sum_probs=41.7

Q ss_pred             CCEEEEecCCch-----------HHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHHHHhHCC-
Q 028523           19 GEYVFVSAASGA-----------VGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFP-   86 (208)
Q Consensus        19 g~~vli~ga~g~-----------vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~-   86 (208)
                      .++|||.|+ |+           .+..+++-+|..|.+++.+-.+++....-. . -+++++  -++ -..+.+.+... 
T Consensus         4 ~kkvlViGs-Gp~rIGq~~EfDy~~~~a~~aLk~~g~~~IliN~NPeTVstd~-d-~aD~lY--fep-lt~e~v~~Ii~~   77 (121)
T d1a9xa4           4 REKIMVLGG-GPNRIGQGIEFDYCCVHASLALREDGYETIMVNCNPETVSTDY-D-TSDRLY--FEP-VTLEDVLEIVRI   77 (121)
T ss_dssp             SCEEEEECC-CSCBTTBCHHHHHHHHHHHHHHHHTTCEEEEECCCTTSSTTST-T-SSSEEE--CCC-CSHHHHHHHHHH
T ss_pred             CCEEEEECC-CcCcccccchhhHHHHHHHHHHHhcCCeEEEEecChhhhhcCh-h-hcCceE--Ecc-CCHHHHHHHHHH
Confidence            468999994 53           334445555667999999998887543111 1 123432  222 11222222222 


Q ss_pred             CCccEEEeCCCchh
Q 028523           87 EGINIYFENVGGKM  100 (208)
Q Consensus        87 ~~~d~v~d~~g~~~  100 (208)
                      +++|.|+-..|+..
T Consensus        78 E~p~~ii~~~GGQt   91 (121)
T d1a9xa4          78 EKPKGVIVQYGGQT   91 (121)
T ss_dssp             HCCSEEECSSSTHH
T ss_pred             hCCCEEEeehhhhh
Confidence            25788888888654

>d2blna2 c.65.1.1 (A:1-203) Polymyxin resistance protein ArnA, N-terminal domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Formyltransferase
superfamily: Formyltransferase
family: Formyltransferase
domain: Polymyxin resistance protein ArnA, N-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=85.60  E-value=3.4  Score=27.14  Aligned_cols=93  Identities=15%  Similarity=0.133  Sum_probs=53.8

Q ss_pred             EEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHH----------HHHHHHhcCCCeeEecCC--CccHHHHHHhHCCCC
Q 028523           21 YVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDK----------VDLLKNKFGFDEAFNYKE--EPDLDAALKRYFPEG   88 (208)
Q Consensus        21 ~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~----------~~~~~~~~g~~~v~~~~~--~~~~~~~~~~~~~~~   88 (208)
                      +|+++| ++..|..+++.+...|.+|..+...+++          .++++ +.|... +...+  .+.+.+.+++.   .
T Consensus         2 kiv~~~-~~~~g~~~l~~L~~~g~~I~~Vvt~~~~~~~~~~~~~~~~~a~-~~~i~~-~~~~~~~~~~~~~~i~~~---~   75 (203)
T d2blna2           2 KTVVFA-YHDMGCLGIEALLAAGYEISAIFTHTDNPGEKAFYGSVARLAA-ERGIPV-YAPDNVNHPLWVERIAQL---S   75 (203)
T ss_dssp             EEEEEE-CHHHHHHHHHHHHHTTCEEEEEECCCC------CCCCHHHHHH-HHTCCE-ECCSCCCSHHHHHHHHHT---C
T ss_pred             eEEEEe-cCHHHHHHHHHHHHCCCCEEEEEcCCCCCCcccccCHHHHHHH-HcCCcc-eecccccchhhhhhhhhh---c
Confidence            467777 5889999999888889988765533221          23444 556542 22221  11344444443   5


Q ss_pred             ccEEEeCCCchhHHHHHHhhccCCEEEEEec
Q 028523           89 INIYFENVGGKMLDAVLLNMRIQGRITLCGM  119 (208)
Q Consensus        89 ~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~  119 (208)
                      +|+++-+..+..+..-+-...+.|.+-.-.+
T Consensus        76 ~Dlii~~g~~~ii~~~il~~~~~~~iN~H~s  106 (203)
T d2blna2          76 PDVIFSFYYRHLIYDEILQLAPAGAFNLHGS  106 (203)
T ss_dssp             CSEEEEESCCSCCCHHHHTTCTTCEEEEESS
T ss_pred             ccceeeeecccchhcccchhhHHHHHHHhhh
Confidence            8999876555554444434446677655444

>d1rp0a1 c.3.1.6 (A:7-284) Thiazole biosynthetic enzyme Thi4 {Thale cress(Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: Thi4-like
domain: Thiazole biosynthetic enzyme Thi4
species: Thale cress(Arabidopsis thaliana) [TaxId: 3702]

Probab=85.00  E-value=0.41  Score=33.33  Aligned_cols=31  Identities=26%  Similarity=0.156  Sum_probs=25.6

Q ss_pred             EEEecCCchHHHHHHH-HHHHcCCEEEEEeCCH
Q 028523           22 VFVSAASGAVGQLVGQ-FAKLVGCYVVGSAGSK   53 (208)
Q Consensus        22 vli~ga~g~vG~~a~q-la~~~g~~v~~~~~s~   53 (208)
                      |+|.|| |+.|+.++. +++..|.+|.++.+++
T Consensus        36 ViVIGa-GpaGL~aA~~LA~~~G~~V~vlE~~~   67 (278)
T d1rp0a1          36 VVVVGA-GSAGLSAAYEISKNPNVQVAIIEQSV   67 (278)
T ss_dssp             EEEECC-SHHHHHHHHHHHTSTTSCEEEEESSS
T ss_pred             EEEECC-CHHHHHHHHHHHHccCCeEEEEecCC
Confidence            889996 999998765 5666799999999764

>d2hmva1 c.2.1.9 (A:7-140) Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn bsu222
species: Bacillus subtilis [TaxId: 1423]

Probab=84.99  E-value=2.1  Score=25.80  Aligned_cols=58  Identities=19%  Similarity=0.186  Sum_probs=37.3

Q ss_pred             cCCCCCCEEEEecCCc-hHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHhcCCCeeEecC
Q 028523           14 CSPKQGEYVFVSAASG-AVGQLVGQFAKLVGC-YVVGSAGSKDKVDLLKNKFGFDEAFNYK   72 (208)
Q Consensus        14 ~~~~~g~~vli~ga~g-~vG~~a~qla~~~g~-~v~~~~~s~~~~~~~~~~~g~~~v~~~~   72 (208)
                      +.+..-+.+++.-... ..-..+...++..+. ++++-+.+++..+.++ .+|++.++++.
T Consensus        60 a~i~~a~~vi~~~~~~~~~~~~~~~~~~~~~~~~iiar~~~~~~~~~l~-~~Gad~vi~p~  119 (134)
T d2hmva1          60 LGIRNFEYVIVAIGANIQASTLTTLLLKELDIPNIWVKAQNYYHHKVLE-KIGADRIIHPE  119 (134)
T ss_dssp             HTGGGCSEEEECCCSCHHHHHHHHHHHHHTTCSEEEEECCSHHHHHHHH-HHTCSEEECHH
T ss_pred             cCCccccEEEEEcCchHHhHHHHHHHHHHcCCCcEEeecccHhHHHHHH-HCCCCEEEChH
Confidence            4455556665543333 333444455566665 8888888888888888 88988887543

>d1u8xx1 c.2.1.5 (X:3-169) Maltose-6'-phosphate glucosidase GlvA {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Maltose-6'-phosphate glucosidase GlvA
species: Bacillus subtilis [TaxId: 1423]

Probab=84.83  E-value=2.6  Score=26.83  Aligned_cols=73  Identities=11%  Similarity=0.131  Sum_probs=41.3

Q ss_pred             CCCEEEEecCCchHHH--HHHHHHHHc-C---CEEEEEeCCHHHHHHHH-------HhcCCCeeEecCCCccHHHHHHhH
Q 028523           18 QGEYVFVSAASGAVGQ--LVGQFAKLV-G---CYVVGSAGSKDKVDLLK-------NKFGFDEAFNYKEEPDLDAALKRY   84 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~--~a~qla~~~-g---~~v~~~~~s~~~~~~~~-------~~~g~~~v~~~~~~~~~~~~~~~~   84 (208)
                      +.-.|.|.|| |++|.  +...+++.. .   .+++..+.++++.+...       ...+.+..+....  +..+.++  
T Consensus         2 k~~KI~iIGa-Gsv~~~~~~~~ll~~~~~l~~~eivL~Did~~~~~~~~~~~~~~~~~~~~~~~~~~~~--d~~eal~--   76 (167)
T d1u8xx1           2 KSFSIVIAGG-GSTFTPGIVLMLLDHLEEFPIRKLKLYDNDKERQDRIAGACDVFIREKAPDIEFAATT--DPEEAFT--   76 (167)
T ss_dssp             CCEEEEEECT-TSSSHHHHHHHHHHTTTTSCEEEEEEECSCHHHHHHHHHHHHHHHHHHCTTSEEEEES--CHHHHHS--
T ss_pred             CCceEEEECC-ChhhhHHHHHHHHhhhhhcCCCEEEEEcCChhHHHHHHHHHHHHHHHhCCCcceEecC--ChhhccC--
Confidence            3446788887 66653  334444433 2   38999998888754221       1334432222222  4444443  


Q ss_pred             CCCCccEEEeCCCc
Q 028523           85 FPEGINIYFENVGG   98 (208)
Q Consensus        85 ~~~~~d~v~d~~g~   98 (208)
                         +.|+|+.++|.
T Consensus        77 ---~AD~Vvitag~   87 (167)
T d1u8xx1          77 ---DVDFVMAHIRV   87 (167)
T ss_dssp             ---SCSEEEECCCT
T ss_pred             ---CCCEEEECCCc
Confidence               58999999983

>d2bs2a2 c.3.1.4 (A:1-250,A:372-457) Fumarate reductase {Wolinella succinogenes [TaxId: 844]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain
domain: Fumarate reductase
species: Wolinella succinogenes [TaxId: 844]

Probab=84.83  E-value=0.42  Score=34.09  Aligned_cols=30  Identities=13%  Similarity=0.039  Sum_probs=26.1

Q ss_pred             EEEecCCchHHHHHHHHHHHcCCEEEEEeCC
Q 028523           22 VFVSAASGAVGQLVGQFAKLVGCYVVGSAGS   52 (208)
Q Consensus        22 vli~ga~g~vG~~a~qla~~~g~~v~~~~~s   52 (208)
                      |+|.|+ |..|+.++--|...|++|+++...
T Consensus         8 VvVIG~-G~AGl~AAl~aa~~G~~V~liEK~   37 (336)
T d2bs2a2           8 SLVIGG-GLAGLRAAVATQQKGLSTIVLSLI   37 (336)
T ss_dssp             EEEECC-SHHHHHHHHHHHTTTCCEEEECSS
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCCEEEEecC
Confidence            788895 999999988888889999998754

>d1qb7a_ c.61.1.1 (A:) Adenine PRTase {Leishmania donovani [TaxId: 5661]}

class: Alpha and beta proteins (a/b)
fold: PRTase-like
superfamily: PRTase-like
family: Phosphoribosyltransferases (PRTases)
domain: Adenine PRTase
species: Leishmania donovani [TaxId: 5661]

Probab=84.70  E-value=1  Score=30.71  Aligned_cols=36  Identities=22%  Similarity=0.153  Sum_probs=29.4

Q ss_pred             CCCCCCEEEEec---CCchHHHHHHHHHHHcCCEEEEEe
Q 028523           15 SPKQGEYVFVSA---ASGAVGQLVGQFAKLVGCYVVGSA   50 (208)
Q Consensus        15 ~~~~g~~vli~g---a~g~vG~~a~qla~~~g~~v~~~~   50 (208)
                      .+.+|++|+|.-   +||+.-.+++++++..|++|+.+.
T Consensus       134 ~l~~g~rVlIVDDviaTGgT~~aa~~ll~~~Ga~Vvg~~  172 (236)
T d1qb7a_         134 SIGKGSRVVLIDDVLATGGTALSGLQLVEASDAVVVEMV  172 (236)
T ss_dssp             SSCTTCEEEEEEEEESSCHHHHHHHHHHHHTTCEEEEEE
T ss_pred             cccCCceEEEehhhhhccHHHHHHHHHHHHCCCEEEEEE
Confidence            467899998763   689999999999999999766433

>d1onfa1 c.3.1.5 (A:1-153,A:271-376) Glutathione reductase {Plasmodium falciparum [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Plasmodium falciparum [TaxId: 5833]

Probab=84.69  E-value=0.63  Score=31.95  Aligned_cols=30  Identities=20%  Similarity=0.101  Sum_probs=26.4

Q ss_pred             EEEecCCchHHHHHHHHHHHcCCEEEEEeCC
Q 028523           22 VFVSAASGAVGQLVGQFAKLVGCYVVGSAGS   52 (208)
Q Consensus        22 vli~ga~g~vG~~a~qla~~~g~~v~~~~~s   52 (208)
                      ++|.|| |+.|+.++..+...|.+|.++.+.
T Consensus         4 viVIG~-G~aG~~aA~~aa~~G~~V~liE~~   33 (259)
T d1onfa1           4 LIVIGG-GSGGMAAARRAARHNAKVALVEKS   33 (259)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEEESS
T ss_pred             EEEECC-CHHHHHHHHHHHHCCCeEEEEecC
Confidence            578895 999999999999999999999854

>d2ax3a2 c.104.1.1 (A:1-211) Hypothetical protein TM0922, N-terminal domain {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: YjeF N-terminal domain-like
superfamily: YjeF N-terminal domain-like
family: YjeF N-terminal domain-like
domain: Hypothetical protein TM0922, N-terminal domain
species: Thermotoga maritima [TaxId: 2336]

Probab=84.67  E-value=2.6  Score=28.01  Aligned_cols=107  Identities=16%  Similarity=0.080  Sum_probs=58.0

Q ss_pred             HHHHHHhcCCCCCCEEEEecCCch---HHHHHHHHHHHcCCEEEEEeCCHHH-------HHHHHHhcCCCeeEecCCCcc
Q 028523            7 YAGFFEVCSPKQGEYVFVSAASGA---VGQLVGQFAKLVGCYVVGSAGSKDK-------VDLLKNKFGFDEAFNYKEEPD   76 (208)
Q Consensus         7 ~~~l~~~~~~~~g~~vli~ga~g~---vG~~a~qla~~~g~~v~~~~~s~~~-------~~~~~~~~g~~~v~~~~~~~~   76 (208)
                      ++.+.+...-.+..+|+|+-|.|.   =|+.+++.++..|++|.+....+..       .+... +++.. .++..+. .
T Consensus        28 a~~i~~~~~~~~~~~vlvl~G~GNNGGDGl~~Ar~L~~~g~~V~v~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~-~  104 (211)
T d2ax3a2          28 VLAMEEELGNLSDYRFLVLCGGGNNGGDGFVVARNLLGVVKDVLVVFLGKKKTPDCEYNYGLYK-KFGGK-VVEQFEP-S  104 (211)
T ss_dssp             HHHHHHHHSCCTTCEEEEEECSSHHHHHHHHHHHHHTTTSSEEEEEECCSSCCHHHHHHHHHHH-HTTCC-EESCCCG-G
T ss_pred             HHHHHHhcccccCCcEEEEECCCCCchhHHHHHHHHHhcCCeeEEEecCccCCcHHHHHHHHHH-HcCCc-ccccccc-c
Confidence            334434333234567877766664   4566677777778887776643332       12222 34432 2222111 1


Q ss_pred             HHHHHHhHCCCCccEEEeCC-Cc-------hhHHHHHHhhccC-CEEEEEecccccC
Q 028523           77 LDAALKRYFPEGINIYFENV-GG-------KMLDAVLLNMRIQ-GRITLCGMISQYN  124 (208)
Q Consensus        77 ~~~~~~~~~~~~~d~v~d~~-g~-------~~~~~~~~~l~~~-G~~v~~g~~~~~~  124 (208)
                      .        ...+|+++|+. |.       ..+...++.++.. ..++.+-.+++-+
T Consensus       105 ~--------~~~~dlIIDal~G~Gl~~~l~~~~~~~i~~iN~~~~~vlsiDiPSGl~  153 (211)
T d2ax3a2         105 I--------LNEFDVVVDAIFGTGLRGEITGEYAEIINLVNKSGKVVVSVDVPSGID  153 (211)
T ss_dssp             G--------GGGCSEEEEESCCTTCCSCCCHHHHHHHHHHHHSCCEEEEESSCTTBC
T ss_pred             c--------ccCceEEEEecccCCccccchHHHHHHHHHHHhhccceeeeccCcccc
Confidence            0        11489999986 21       1466677777664 5577777776643

>d1mo9a1 c.3.1.5 (A:2-192,A:314-383) NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase {Xanthobacter sp., py2 [TaxId: 35809]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase
species: Xanthobacter sp., py2 [TaxId: 35809]

Probab=84.53  E-value=0.58  Score=32.18  Aligned_cols=31  Identities=13%  Similarity=0.173  Sum_probs=26.9

Q ss_pred             EEEecCCchHHHHHHHHHHHcCCEEEEEeCCH
Q 028523           22 VFVSAASGAVGQLVGQFAKLVGCYVVGSAGSK   53 (208)
Q Consensus        22 vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~   53 (208)
                      ++|.|+ |+.|+.++..+..+|.+|.++...+
T Consensus        45 vvVIGg-G~aG~~aA~~~a~~G~kv~vve~~~   75 (261)
T d1mo9a1          45 AIFIGG-GAAGRFGSAYLRAMGGRQLIVDRWP   75 (261)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEEESSS
T ss_pred             EEEECC-CHHHHHHHHHHHHCCCeEEEEeccC
Confidence            778885 9999999999999999999988643

>d1dlja2 c.2.1.6 (A:1-196) UDP-glucose dehydrogenase (UDPGDH) {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: UDP-glucose dehydrogenase (UDPGDH)
species: Streptococcus pyogenes [TaxId: 1314]

Probab=84.48  E-value=1.2  Score=29.08  Aligned_cols=38  Identities=26%  Similarity=0.197  Sum_probs=31.5

Q ss_pred             EEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH
Q 028523           21 YVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLK   60 (208)
Q Consensus        21 ~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~   60 (208)
                      +|.|.| .|-+|+..+.++ +.|.+|++.+.++++.+.++
T Consensus         2 kI~ViG-lG~vGl~~a~~~-a~g~~V~g~Din~~~v~~l~   39 (196)
T d1dlja2           2 KIAVAG-SGYVGLSLGVLL-SLQNEVTIVDILPSKVDKIN   39 (196)
T ss_dssp             EEEEEC-CSHHHHHHHHHH-TTTSEEEEECSCHHHHHHHH
T ss_pred             EEEEEC-CChhHHHHHHHH-HCCCcEEEEECCHHHHHHHh
Confidence            477888 699999877555 56999999999999888776

>d2gmha1 c.3.1.2 (A:4-236,A:336-482) Electron transfer flavoprotein-ubiquinone oxidoreductase, EFT-QO {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Electron transfer flavoprotein-ubiquinone oxidoreductase, EFT-QO
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=84.43  E-value=0.47  Score=34.89  Aligned_cols=31  Identities=19%  Similarity=0.148  Sum_probs=23.7

Q ss_pred             EEEecCCchHHHHHHHH-HHH-----cCCEEEEEeCCH
Q 028523           22 VFVSAASGAVGQLVGQF-AKL-----VGCYVVGSAGSK   53 (208)
Q Consensus        22 vli~ga~g~vG~~a~ql-a~~-----~g~~v~~~~~s~   53 (208)
                      |+|.|| |+.|++++.. +++     .|.+|.++.+..
T Consensus        35 ViIVGg-GPAGlsaA~~LA~l~~~~~~Gl~VlllEK~~   71 (380)
T d2gmha1          35 VVIVGA-GPAGLSAATRLKQLAAQHEKDLRVCLVEKAA   71 (380)
T ss_dssp             EEEECC-SHHHHHHHHHHHHHHHHTTCCCCEEEECSSS
T ss_pred             EEEECC-CHHHHHHHHHHHhhhhhhcCCCEEEEEcCCC
Confidence            778897 9999887644 442     688999999664

>d1nv8a_ c.66.1.30 (A:) N5-glutamine methyltransferase, HemK {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: N5-glutamine methyltransferase, HemK
domain: N5-glutamine methyltransferase, HemK
species: Thermotoga maritima [TaxId: 2336]

Probab=84.38  E-value=0.92  Score=31.63  Aligned_cols=74  Identities=16%  Similarity=0.211  Sum_probs=39.6

Q ss_pred             CEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH---hcCCCeeEecCCCccHHHHHHhHCCCCccEEEeCC
Q 028523           20 EYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKN---KFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENV   96 (208)
Q Consensus        20 ~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~---~~g~~~v~~~~~~~~~~~~~~~~~~~~~d~v~d~~   96 (208)
                      ..++-.|  +|.|..++.+++...++|++++.|++..+.+++   .++....+..... ++.+.... ..+.||+|+..-
T Consensus       112 ~~vld~g--~GsG~i~~~la~~~~~~v~a~Dis~~Al~~A~~Na~~~~~~~~~~i~~~-~~~~~~~~-~~~~fDlIVsNP  187 (271)
T d1nv8a_         112 KTVADIG--TGSGAIGVSVAKFSDAIVFATDVSSKAVEIARKNAERHGVSDRFFVRKG-EFLEPFKE-KFASIEMILSNP  187 (271)
T ss_dssp             CEEEEES--CTTSHHHHHHHHHSSCEEEEEESCHHHHHHHHHHHHHTTCTTSEEEEES-STTGGGGG-GTTTCCEEEECC
T ss_pred             cEEEEee--eeeehhhhhhhhcccceeeechhhhhHHHHHHHHHHHcCCCceeEEeec-cccccccc-ccCcccEEEEcc
Confidence            3455444  333333444566677899999999998887764   3454322111111 22222221 123688888654


Q ss_pred             C
Q 028523           97 G   97 (208)
Q Consensus        97 g   97 (208)
                      +
T Consensus       188 P  188 (271)
T d1nv8a_         188 P  188 (271)
T ss_dssp             C
T ss_pred             c
Confidence            3

>d1lqta2 c.4.1.1 (A:2-108,A:325-456) Ferredoxin:NADP reductase FprA {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Ferredoxin:NADP reductase FprA
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=84.06  E-value=0.41  Score=32.14  Aligned_cols=34  Identities=9%  Similarity=-0.058  Sum_probs=26.4

Q ss_pred             CEEEEecCCchHHHHHHHHHHHcC-------CEEEEEeCCHH
Q 028523           20 EYVFVSAASGAVGQLVGQFAKLVG-------CYVVGSAGSKD   54 (208)
Q Consensus        20 ~~vli~ga~g~vG~~a~qla~~~g-------~~v~~~~~s~~   54 (208)
                      -+|+|.|+ |+.|++++..+...|       ++|.+....+.
T Consensus         3 ~~VaVIGa-GpaGL~aA~~L~~~G~~~~~~~~~V~v~E~~~~   43 (239)
T d1lqta2           3 YYIAIVGS-GPSAFFAAASLLKAADTTEDLDMAVDMLEMLPT   43 (239)
T ss_dssp             EEEEEECC-SHHHHHHHHHHHHHHHHSTTCCEEEEEEESSSS
T ss_pred             cEEEEECc-CHHHHHHHHHHHHcCCccccCCCceEEEecCCC
Confidence            37999995 999999987776665       47888886543

>d1g2qa_ c.61.1.1 (A:) Adenine PRTase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: PRTase-like
superfamily: PRTase-like
family: Phosphoribosyltransferases (PRTases)
domain: Adenine PRTase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=84.00  E-value=1.4  Score=28.48  Aligned_cols=36  Identities=14%  Similarity=0.272  Sum_probs=29.7

Q ss_pred             CCCCCCEEEEec---CCchHHHHHHHHHHHcCCEEEEEe
Q 028523           15 SPKQGEYVFVSA---ASGAVGQLVGQFAKLVGCYVVGSA   50 (208)
Q Consensus        15 ~~~~g~~vli~g---a~g~vG~~a~qla~~~g~~v~~~~   50 (208)
                      .+.+|++|+|.-   +||+.-.+++++++..|++|+.+.
T Consensus       118 ~l~~g~rVlIVDDviaTGgT~~a~~~ll~~~Ga~vvgv~  156 (178)
T d1g2qa_         118 AIPAGSNVIIVDDIIATGGSAAAAGELVEQLEANLLEYN  156 (178)
T ss_dssp             SSCTTCEEEEEEEEESSCHHHHHHHHHHHHTTCEEEEEE
T ss_pred             cccCCCEEEEEehHhhhChHHHHHHHHHHHcCCEEEEEE
Confidence            467899998763   789999999999999999876433

>d2cula1 c.3.1.7 (A:2-231) GidA-related protein TTHA1897 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: GidA-like
domain: GidA-related protein TTHA1897
species: Thermus thermophilus [TaxId: 274]

Probab=84.00  E-value=0.86  Score=30.94  Aligned_cols=32  Identities=25%  Similarity=0.176  Sum_probs=27.7

Q ss_pred             EEEecCCchHHHHHHHHHHHcCCEEEEEeCCHH
Q 028523           22 VFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKD   54 (208)
Q Consensus        22 vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~   54 (208)
                      |+|.|| |+.|+.|+-.+..+|.++..+..+.+
T Consensus         5 VIVIGg-G~AG~eAA~~aAR~G~ktllit~~~~   36 (230)
T d2cula1           5 VLIVGA-GFSGAETAFWLAQKGVRVGLLTQSLD   36 (230)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEEESCGG
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCcEEEEEeccc
Confidence            678896 99999999999999999998886654

>d1m6ia2 c.3.1.5 (A:264-400) Apoptosis-inducing factor (AIF) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Apoptosis-inducing factor (AIF)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=83.98  E-value=1  Score=27.67  Aligned_cols=36  Identities=14%  Similarity=0.184  Sum_probs=26.6

Q ss_pred             CCCCEEEEecCCchHHHHHHHHH----HHcCCEEEEEeCCH
Q 028523           17 KQGEYVFVSAASGAVGQLVGQFA----KLVGCYVVGSAGSK   53 (208)
Q Consensus        17 ~~g~~vli~ga~g~vG~~a~qla----~~~g~~v~~~~~s~   53 (208)
                      +.+++++|.|| |.+|.-++..+    +..|.+|+.+.+++
T Consensus        35 ~~~k~i~IvGg-G~~G~E~A~~l~~~~~~~g~~Vt~i~~~~   74 (137)
T d1m6ia2          35 REVKSITIIGG-GFLGSELACALGRKARALGTEVIQLFPEK   74 (137)
T ss_dssp             HHCSEEEEECC-SHHHHHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred             hcCCEEEEECC-CHHHHHHHHHHHHHHHhcCCEEEEecccc
Confidence            45789999996 99996544333    45789999888654

>d1hyea1 c.2.1.5 (A:1-145) MJ0490, lactate/malate dehydrogenase {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: MJ0490, lactate/malate dehydrogenase
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=83.94  E-value=1.6  Score=27.10  Aligned_cols=33  Identities=21%  Similarity=0.102  Sum_probs=27.3

Q ss_pred             EEEEecCCchHHHHHHHHHHHcCC--EEEEEeCCH
Q 028523           21 YVFVSAASGAVGQLVGQFAKLVGC--YVVGSAGSK   53 (208)
Q Consensus        21 ~vli~ga~g~vG~~a~qla~~~g~--~v~~~~~s~   53 (208)
                      .|.|.||+|.+|...+.++...+.  ++..++..+
T Consensus         2 KV~IiGA~G~VG~~~a~~l~~~~l~~el~L~D~~~   36 (145)
T d1hyea1           2 KVTIIGASGRVGSATALLLAKEPFMKDLVLIGREH   36 (145)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTCTTCCEEEEEECGG
T ss_pred             EEEEECCCChHHHHHHHHHHhCCcccccccccchh
Confidence            478999889999999888888875  888888654

>d1y6ja1 c.2.1.5 (A:7-148) Lactate dehydrogenase {Clostridium thermocellum [TaxId: 1515]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Clostridium thermocellum [TaxId: 1515]

Probab=83.23  E-value=2.1  Score=26.48  Aligned_cols=34  Identities=26%  Similarity=0.094  Sum_probs=25.4

Q ss_pred             EEEEecCCchHHHHHHHHHHHcCC--EEEEEeCCHHH
Q 028523           21 YVFVSAASGAVGQLVGQFAKLVGC--YVVGSAGSKDK   55 (208)
Q Consensus        21 ~vli~ga~g~vG~~a~qla~~~g~--~v~~~~~s~~~   55 (208)
                      .|.|.|+ |.+|...+..+...+.  +++..+..+++
T Consensus         3 KI~IIGa-G~VG~~~a~~l~~~~l~~el~L~D~~~~~   38 (142)
T d1y6ja1           3 KVAIIGA-GFVGASAAFTMALRQTANELVLIDVFKEK   38 (142)
T ss_dssp             CEEEECC-SHHHHHHHHHHHHTTCSSEEEEECCC---
T ss_pred             eEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeccCCc
Confidence            5778896 9999988877777765  79998877764

>d1jsxa_ c.66.1.20 (A:) Glucose-inhibited division protein B (GidB) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Glucose-inhibited division protein B (GidB)
domain: Glucose-inhibited division protein B (GidB)
species: Escherichia coli [TaxId: 562]

Probab=82.86  E-value=2.9  Score=27.69  Aligned_cols=92  Identities=14%  Similarity=0.082  Sum_probs=60.3

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHH---hcCCC--eeEecCCCccHHHHHHhHCCC-Ccc
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLV-GCYVVGSAGSKDKVDLLKN---KFGFD--EAFNYKEEPDLDAALKRYFPE-GIN   90 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~-g~~v~~~~~s~~~~~~~~~---~~g~~--~v~~~~~~~~~~~~~~~~~~~-~~d   90 (208)
                      ++++++=.|  +|-|.=.+-+|-.. ..+++.++++..+..++++   ++|..  .+++.+-. +       .... .+|
T Consensus        65 ~~~~ilDiG--sGaG~PGi~laI~~p~~~~~Lves~~KK~~FL~~~~~~L~L~nv~v~~~R~E-~-------~~~~~~fD  134 (207)
T d1jsxa_          65 QGERFIDVG--TGPGLPGIPLSIVRPEAHFTLLDSLGKRVRFLRQVQHELKLENIEPVQSRVE-E-------FPSEPPFD  134 (207)
T ss_dssp             CSSEEEEET--CTTTTTHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHTTCSSEEEEECCTT-T-------SCCCSCEE
T ss_pred             cCCceeeee--ccCCceeeehhhhcccceEEEEecchHHHHHHHHHHHHcCCcceeeeccchh-h-------hccccccc
Confidence            467787666  34455555566554 5699999999998877664   56765  34543322 1       1122 689


Q ss_pred             EEEe-CCC--chhHHHHHHhhccCCEEEEEec
Q 028523           91 IYFE-NVG--GKMLDAVLLNMRIQGRITLCGM  119 (208)
Q Consensus        91 ~v~d-~~g--~~~~~~~~~~l~~~G~~v~~g~  119 (208)
                      +|.- +++  ...+..+...++++|+++.+-+
T Consensus       135 ~V~sRA~~~~~~ll~~~~~~l~~~g~~~~~KG  166 (207)
T d1jsxa_         135 GVISRAFASLNDMVSWCHHLPGEQGRFYALKG  166 (207)
T ss_dssp             EEECSCSSSHHHHHHHHTTSEEEEEEEEEEES
T ss_pred             eehhhhhcCHHHHHHHHHHhcCCCcEEEEECC
Confidence            8874 444  2466777788999999988754

>d1xdza_ c.66.1.20 (A:) Glucose-inhibited division protein B (GidB) {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Glucose-inhibited division protein B (GidB)
domain: Glucose-inhibited division protein B (GidB)
species: Bacillus subtilis [TaxId: 1423]

Probab=82.84  E-value=3.4  Score=28.05  Aligned_cols=98  Identities=10%  Similarity=0.068  Sum_probs=60.4

Q ss_pred             CCCCEEEEecCCchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHH---hcCCCeeEecCCCccHHHHHHhH--CCCCcc
Q 028523           17 KQGEYVFVSAASGAVGQLVGQFAKLV-GCYVVGSAGSKDKVDLLKN---KFGFDEAFNYKEEPDLDAALKRY--FPEGIN   90 (208)
Q Consensus        17 ~~g~~vli~ga~g~vG~~a~qla~~~-g~~v~~~~~s~~~~~~~~~---~~g~~~v~~~~~~~~~~~~~~~~--~~~~~d   90 (208)
                      ..+.+++=.|.  |-|.=.+-++-.. ..+++.++++..+..++++   ++|...+.-.+.  ... .+...  ..+.+|
T Consensus        69 ~~~~~ilDiGS--GaGfPGi~laI~~p~~~v~Lves~~KK~~FL~~v~~~L~L~n~~i~~~--R~E-~~~~~~~~~~~~D  143 (239)
T d1xdza_          69 NQVNTICDVGA--GAGFPSLPIKICFPHLHVTIVDSLNKRITFLEKLSEALQLENTTFCHD--RAE-TFGQRKDVRESYD  143 (239)
T ss_dssp             GGCCEEEEECS--SSCTTHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHTCSSEEEEES--CHH-HHTTCTTTTTCEE
T ss_pred             cCCCeEEeecC--CCchHHHHHHHhCCCccceeecchHHHHHHHHHHHHHhCCCCcEEEee--hhh-hccccccccccce
Confidence            35667776663  3344445555444 4699999999998877653   677654322222  222 22111  123689


Q ss_pred             EEEe-CCC--chhHHHHHHhhccCCEEEEEec
Q 028523           91 IYFE-NVG--GKMLDAVLLNMRIQGRITLCGM  119 (208)
Q Consensus        91 ~v~d-~~g--~~~~~~~~~~l~~~G~~v~~g~  119 (208)
                      +|.- +++  ...+..+...++++|+++.+=+
T Consensus       144 ~v~sRAva~l~~ll~~~~~~l~~~g~~i~~KG  175 (239)
T d1xdza_         144 IVTARAVARLSVLSELCLPLVKKNGLFVALKA  175 (239)
T ss_dssp             EEEEECCSCHHHHHHHHGGGEEEEEEEEEEEC
T ss_pred             EEEEhhhhCHHHHHHHHhhhcccCCEEEEECC
Confidence            8886 444  3567888889999999988644

>d1llda1 c.2.1.5 (A:7-149) Lactate dehydrogenase {Bifidobacterium longum, strain am101-2 [TaxId: 216816]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Bifidobacterium longum, strain am101-2 [TaxId: 216816]

Probab=82.82  E-value=3.7  Score=25.33  Aligned_cols=36  Identities=31%  Similarity=0.269  Sum_probs=28.2

Q ss_pred             CEEEEecCCchHHHHHHHHHHHcCC--EEEEEeCCHHHH
Q 028523           20 EYVFVSAASGAVGQLVGQFAKLVGC--YVVGSAGSKDKV   56 (208)
Q Consensus        20 ~~vli~ga~g~vG~~a~qla~~~g~--~v~~~~~s~~~~   56 (208)
                      ..|.|.|+ |.+|..++..+...+.  +++..+..+++.
T Consensus         2 ~Ki~IIGa-G~VG~~~a~~l~~~~l~~ElvL~D~~~~~~   39 (143)
T d1llda1           2 TKLAVIGA-GAVGSTLAFAAAQRGIAREIVLEDIAKERV   39 (143)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHH
T ss_pred             CEEEEECC-CHHHHHHHHHHHhcCCCcEEEEEEeccccc
Confidence            35788896 9999998877777665  888888777653

>d1a4ia1 c.2.1.7 (A:127-296) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=82.69  E-value=2  Score=27.54  Aligned_cols=77  Identities=16%  Similarity=0.121  Sum_probs=53.0

Q ss_pred             CCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHHHHhHCCCCccEEEeCC
Q 028523           17 KQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENV   96 (208)
Q Consensus        17 ~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~d~v~d~~   96 (208)
                      -.|.+|+|.|.+.-+|.-+..++...|++|+.+......                     ..+..+     ..|+++-++
T Consensus        37 l~Gk~vvVIGrS~iVGrPLa~lL~~~gatVt~~~~~t~~---------------------l~~~~~-----~aDivi~a~   90 (170)
T d1a4ia1          37 IAGRHAVVVGRSKIVGAPMHDLLLWNNATVTTCHSKTAH---------------------LDEEVN-----KGDILVVAT   90 (170)
T ss_dssp             CTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTCSS---------------------HHHHHT-----TCSEEEECC
T ss_pred             cccceEEEEecCCccchHHHHHHHhccCceEEEeccccc---------------------HHHHHh-----hccchhhcc
Confidence            479999999999999999999999999999987743222                     222222     267777777


Q ss_pred             CchhHHHHHHhhccCCEEEEEecc
Q 028523           97 GGKMLDAVLLNMRIQGRITLCGMI  120 (208)
Q Consensus        97 g~~~~~~~~~~l~~~G~~v~~g~~  120 (208)
                      |.+.+- --+.++++-.++.+|..
T Consensus        91 G~~~~i-~~~~vk~g~iviDvgi~  113 (170)
T d1a4ia1          91 GQPEMV-KGEWIKPGAIVIDCGIN  113 (170)
T ss_dssp             CCTTCB-CGGGSCTTCEEEECCCB
T ss_pred             cccccc-ccccccCCCeEeccCcc
Confidence            743321 13467777777777654

>d1ez4a1 c.2.1.5 (A:16-162) Lactate dehydrogenase {Lactobacillus pentosus [TaxId: 1589]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Lactobacillus pentosus [TaxId: 1589]

Probab=82.54  E-value=2  Score=26.73  Aligned_cols=37  Identities=24%  Similarity=0.161  Sum_probs=29.4

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCC--EEEEEeCCHHH
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGC--YVVGSAGSKDK   55 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~--~v~~~~~s~~~   55 (208)
                      ...+|.|.|+ |.+|...+..+...|.  +++..+..+++
T Consensus         4 ~~~KI~IIGa-G~VG~~~A~~l~~~~~~~elvL~D~~~~~   42 (146)
T d1ez4a1           4 NHQKVVLVGD-GAVGSSYAFAMAQQGIAEEFVIVDVVKDR   42 (146)
T ss_dssp             TBCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhcCCCcEEEEeecccch
Confidence            4557999995 9999988877777663  89999987764

>d2dt5a2 c.2.1.12 (A:78-203) Transcriptional repressor Rex, C-terminal domain {Thermus aquaticus [TaxId: 271]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Transcriptional repressor Rex, C-terminal domain
domain: Transcriptional repressor Rex, C-terminal domain
species: Thermus aquaticus [TaxId: 271]

Probab=82.51  E-value=0.29  Score=29.92  Aligned_cols=83  Identities=11%  Similarity=-0.009  Sum_probs=48.4

Q ss_pred             CEEEEecCCchHHHHHHHHHH-HcCCEEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHHHHhHCCCCccEEEeCCCc
Q 028523           20 EYVFVSAASGAVGQLVGQFAK-LVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVGG   98 (208)
Q Consensus        20 ~~vli~ga~g~vG~~a~qla~-~~g~~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~d~v~d~~g~   98 (208)
                      -+|+|+|| |..|.+.+...+ ..++++++......+.. =+ .+.--.|++..   ++.+    .....+++++-++..
T Consensus         4 ~~v~I~Ga-G~~G~~l~~~l~~~~~~~iv~fiDdd~~k~-G~-~I~Gi~V~~~~---~l~~----~~~~~i~iai~~i~~   73 (126)
T d2dt5a2           4 WGLCIVGM-GRLGSALADYPGFGESFELRGFFDVDPEKV-GR-PVRGGVIEHVD---LLPQ----RVPGRIEIALLTVPR   73 (126)
T ss_dssp             EEEEEECC-SHHHHHHHHCSCCCSSEEEEEEEESCTTTT-TC-EETTEEEEEGG---GHHH----HSTTTCCEEEECSCH
T ss_pred             ceEEEEcC-CHHHHHHHHhHhhcCCcEEEEEEeCchHhc-CC-EECCEEEecHH---HHHH----HHhhcccEEEEeCCH
Confidence            37999996 999987665332 34668877774433211 00 12112355432   3332    233368899999987


Q ss_pred             hhHHHHHHhhccCC
Q 028523           99 KMLDAVLLNMRIQG  112 (208)
Q Consensus        99 ~~~~~~~~~l~~~G  112 (208)
                      ...++..+.|...|
T Consensus        74 ~~~~~I~d~l~~~g   87 (126)
T d2dt5a2          74 EAAQKAADLLVAAG   87 (126)
T ss_dssp             HHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHcC
Confidence            77777766665544

>d2fpoa1 c.66.1.46 (A:10-192) Methylase YhhF {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: YhhF-like
domain: Methylase YhhF
species: Escherichia coli [TaxId: 562]

Probab=82.37  E-value=4.4  Score=25.96  Aligned_cols=92  Identities=15%  Similarity=0.011  Sum_probs=50.9

Q ss_pred             CCCEEE-EecCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHH---hcCCCeeEecCCCccHHHHHHhHCCCCccEE
Q 028523           18 QGEYVF-VSAASGAVGQLVGQFAKLVGC-YVVGSAGSKDKVDLLKN---KFGFDEAFNYKEEPDLDAALKRYFPEGINIY   92 (208)
Q Consensus        18 ~g~~vl-i~ga~g~vG~~a~qla~~~g~-~v~~~~~s~~~~~~~~~---~~g~~~v~~~~~~~~~~~~~~~~~~~~~d~v   92 (208)
                      .+.++| ++.|+|.+|+.    |.+.|+ +|+.++.+.+..+.+++   .++...+--.. . +....+.. ....+|+|
T Consensus        43 ~~~~vLDlfaGsG~~gie----alsrGa~~v~~VE~~~~a~~~~k~N~~~~~~~~~~ii~-~-d~~~~l~~-~~~~fDlI  115 (183)
T d2fpoa1          43 VDAQCLDCFAGSGALGLE----ALSRYAAGATLIEMDRAVSQQLIKNLATLKAGNARVVN-S-NAMSFLAQ-KGTPHNIV  115 (183)
T ss_dssp             TTCEEEETTCTTCHHHHH----HHHTTCSEEEEECSCHHHHHHHHHHHHHTTCCSEEEEC-S-CHHHHHSS-CCCCEEEE
T ss_pred             chhhhhhhhccccceeee----EEecCcceeEEEEEeechhhHHHHHHhhccccceeeee-e-cccccccc-cccccCEE
Confidence            455665 44556666653    334688 89999999988777664   34443321112 2 44444432 23379999


Q ss_pred             EeCCC--chhHHHHHHh------hccCCEEEE
Q 028523           93 FENVG--GKMLDAVLLN------MRIQGRITL  116 (208)
Q Consensus        93 ~d~~g--~~~~~~~~~~------l~~~G~~v~  116 (208)
                      |---+  .......+..      |+++|.++.
T Consensus       116 f~DPPY~~~~~~~~l~~l~~~~~L~~~~iIii  147 (183)
T d2fpoa1         116 FVDPPFRRGLLEETINLLEDNGWLADEALIYV  147 (183)
T ss_dssp             EECCSSSTTTHHHHHHHHHHTTCEEEEEEEEE
T ss_pred             EEcCccccchHHHHHHHHHHCCCCCCCeEEEE
Confidence            86433  2333344433      566665554

>d2b9ea1 c.66.1.38 (A:133-425) NOL1R {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: NOL1/NOP2/sun
domain: NOL1R
species: Human (Homo sapiens) [TaxId: 9606]

Probab=81.81  E-value=4.6  Score=28.16  Aligned_cols=52  Identities=17%  Similarity=0.222  Sum_probs=35.5

Q ss_pred             cCCCCCCEEEEecCCchHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHH---hcCCCe
Q 028523           14 CSPKQGEYVFVSAASGAVGQLVGQFAKLV--GCYVVGSAGSKDKVDLLKN---KFGFDE   67 (208)
Q Consensus        14 ~~~~~g~~vli~ga~g~vG~~a~qla~~~--g~~v~~~~~s~~~~~~~~~---~~g~~~   67 (208)
                      ...++|++||=..|  +-|--+++++..+  +.+|++.+.+..+.+.+++   .+|...
T Consensus        90 L~~~~g~~vLD~cA--apGgKt~~la~l~~~~~~i~a~d~~~~R~~~l~~~l~r~g~~~  146 (293)
T d2b9ea1          90 LDPPPGSHVIDACA--APGNKTSHLAALLKNQGKIFAFDLDAKRLASMATLLARAGVSC  146 (293)
T ss_dssp             HCCCTTCEEEESSC--TTCHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCCS
T ss_pred             cCCCccceEEeccc--chhhHHHHHHHHhcCCceEeeecCCHHHHHHHHHHHHhcCccc
Confidence            46789999876553  3344456666554  3489999999988776653   567754

>d2gv8a2 c.3.1.5 (A:181-287) Flavin-dependent monoxygenase SPBP16F5.08c {Schizosaccharomyces pombe [TaxId: 4896]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavin-dependent monoxygenase SPBP16F5.08c
species: Schizosaccharomyces pombe [TaxId: 4896]

Probab=81.80  E-value=0.57  Score=27.49  Aligned_cols=34  Identities=15%  Similarity=0.011  Sum_probs=19.8

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCC
Q 028523           18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGS   52 (208)
Q Consensus        18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s   52 (208)
                      +|++|+|.|+ |..|.-.+.-+...+.+++...++
T Consensus        31 ~gK~VlVVG~-g~Sa~dia~~l~~~ak~v~~~~~r   64 (107)
T d2gv8a2          31 VGESVLVVGG-ASSANDLVRHLTPVAKHPIYQSLL   64 (107)
T ss_dssp             TTCCEEEECS-SHHHHHHHHHHTTTSCSSEEEECT
T ss_pred             CCCeEEEECC-CCCHHHHHHHHHHhcCEEEEEEec
Confidence            5899999996 655544333332233455555544