Citrus Sinensis ID: 028799

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200---
Protein Sequence
MEGLVRSQISPIGAHYKQQHSVFIPKFSLKLRTNLCRARVGMMKHSKSFNSVAASVQPLEASALGRSENTLPSKEVLQLWRTADAVCFDVDSTVCVDEGIDELAEFCGAGKAVAEWTARAMGGSVPFEEALAARLSLFKPSLSQVQDFLEKRPPRLSPGIDELVKKLKANNKNVYLISGGFRHMINILNILKWDVLKVIQITS
Secondary Structure (PSIPRED)
cccccccccccccccccccccccccHHHHHHHHHHHccHHHHHcccccccccccccccHHHHHccccccccccHHHHHHcccccEEEEEcccccHHHHHHHHHHHHccccHHHHHHHHHHHcccccHHHHHHHHHHHccccHHHHHHHHHHccccccccHHHHHHHHHHcccEEEEEccccHHHHHHHcHHcHHHHHHHcccc
Secondary Structure Prediction (SSPRO)
cccHEccccccEccccEEccccccccccccccccccEEEEEEccccccccccccccHHHHHHHHHHHccccHHHHcHHHHccccEEEEcHHHHHEcccHHHHHHHHcccHHHHHHHHHHHHcccccHHHHHHHHHHccccccHHHHHHHHHccccccccHHHHHHHHHHcccEEEEEEccHHHHHHHHcccHHHHHHHHEccc
Coil and Loop (DISEMBL)
meglvrsqispigahykqqhsvfipKFSLKLRTNLCRArvgmmkhsksfnsvaasvqpleasalgrsentlpskEVLQLWRTADavcfdvdstvcvDEGIDELAEFCGAGKAVAEWTARAMGGSVPFEEALAARLSLFKPSLSQVQDFlekrpprlspgIDELVKKLKANNKNVYLISGGFRHMINILNILKWDVLKVIQITS
Flexible Loop (DISEMBL)
meglvrsqispigahykqqhsvfiPKFSLKLRTNLCRARVGMMKHSKSFNSVAASVQPLEasalgrsentlpSKEVLQLWRTADAVCFDVDSTVCVDEGIDELAEFCGAGKAVAEWTARAMGGSVPFEEALAARLSLFKPSLSQVQDflekrpprlspGIDELVKKLKANNKNVYLISGGFRHMINILNILKWDVLKVIQITS
Low Complexity Region (SEG)
MEGLVRSQISPIGAHYKQQHSVFIPKFSLKLRTNLCRARVGMMKHSKSFNSVAASVQPLEASALGRSENTLPSKEVLQLWRTADAVCFDVDSTVCVDEGIDELAEFCGAGKAVAEWTARAMGGSVPFEEALAARLSLFKPSLSQVQDFLEKRPPRLSPGIDElvkklkannknvYLISGGFRHMINILNILKWDVLKVIQITS
Disordered region (IsUnstruct)
***********IGAHYKQQHSVFIPKFSLKLRTNLCRARVGMM*******************************EVLQLWRTADAVCFDVDSTVCVDEGIDELAEFCGAGKAVAEWTARAMGGSVPFEEALAARLSLFKPSL*****************IDELVKKLKANNKNVYLISGGFRHMINILNILKWDVLKVIQI**
Disordered Region (DISOPRED)
*********S***********************************************PLEASALGRSENTLPSKEVLQLWRTADAVCFDVDSTVCVDEGIDELAEFCGAGKAVAEWTARAMGGSVPFEEALAARLSLFKPSLSQVQDFLEKRPPRLSPGIDELVKKLKANNKNVYLISGGFRHMINILNILKWDVLKVIQITS
Disordered Region (DISEMBL)
MEGLVRSQISPIGAHYKQQHSVFIPKFSLKLRTNLCRARVGMMKHSKSFNSVAASVQPLEASALGRSENTLPSKEVLQLWRTADAVCFDVDSTVCVDEGIDELAEFCGAGKAVAEWTARAMGGSVPFEEALAARLSLFKPSLSQVQDFLEKRPPRLSPGIDELVKKLKANNKNVYLISGGFRHMINILNILKWDVLKVIQITS
Disordered Region (DISPRO)
****VRSQISPIGAHYKQQHSVFIPKFSLKLRTNLCRARVGMMKHSKSFNSVAASVQPLEASALGRSENTLPSKEVLQLWRTADAVCFDVDSTVCVDEGIDELAEFCGAGKAVAEWTARAMGGSVPFEEALAARLSLFKPSLSQVQDFLEKRPPRLSPGIDELVKKLKANNKNVYLISGGFRHMINILNILKWDVLKVIQITS
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHoooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MEGLVRSQISPIGAHYKQQHSVFIPKFSLKLRTNLCRARVGMMKHSKSFNSVAASVQPLEASALGRSENTLPSKEVLQLWRTADAVCFDVDSTVCVDEGIDELAEFCGAGKAVAEWTARAMGGSVPFEEALAARLSLFKPSLSQVQDFLEKRPPRLSPGIDELVKKLKANNKNVYLISGGFRHMINILNILKWDVLKVIQITS
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	203	2.2.26 [Sep-21-2011]
O82796	295	Phosphoserine phosphatase	yes	no	0.916	0.630	0.682	3e-69
Q99LS3	225	Phosphoserine phosphatase	yes	no	0.600	0.542	0.555	4e-32
Q5M819	225	Phosphoserine phosphatase	yes	no	0.600	0.542	0.555	4e-32
Q5RB83	225	Phosphoserine phosphatase	yes	no	0.600	0.542	0.547	6e-32
P78330	225	Phosphoserine phosphatase	yes	no	0.600	0.542	0.547	6e-32
Q2KHU0	225	Phosphoserine phosphatase	yes	no	0.600	0.542	0.555	6e-32
Q9VSY6	270	Phosphoserine phosphatase	yes	no	0.492	0.370	0.55	1e-26
O28142	344	Phosphoserine phosphatase	yes	no	0.502	0.296	0.398	2e-11
P0AGB2	322	Phosphoserine phosphatase	yes	no	0.492	0.310	0.376	1e-09
P0AGB0	322	Phosphoserine phosphatase	N/A	no	0.492	0.310	0.376	1e-09

>sp|O82796|SERB_ARATH Phosphoserine phosphatase, chloroplastic OS=Arabidopsis thaliana GN=PSP PE=1 SV=2

 Score =  261 bits (666), Expect = 3e-69,   Method: Compositional matrix adjust.
 Identities = 127/186 (68%), Positives = 147/186 (79%)

Query: 1   MEGLVRSQISPIGAHYKQQHSVFIPKFSLKLRTNLCRARVGMMKHSKSFNSVAASVQPLE 60
           ME L  S++ P+    ++  S+F     L+LR   CR  V +M H K    V ASVQP E
Sbjct: 1   MEALTTSRVVPVQVPCRKLSSLFANFSCLELRRYPCRGLVSIMNHPKLLRPVTASVQPHE 60

Query: 61  ASALGRSENTLPSKEVLQLWRTADAVCFDVDSTVCVDEGIDELAEFCGAGKAVAEWTARA 120
            S LG   N +PSKE+L LWR+ +AVCFDVDSTVCVDEGIDELAEFCGAGKAVAEWTARA
Sbjct: 61  LSTLGHEGNIVPSKEILDLWRSVEAVCFDVDSTVCVDEGIDELAEFCGAGKAVAEWTARA 120

Query: 121 MGGSVPFEEALAARLSLFKPSLSQVQDFLEKRPPRLSPGIDELVKKLKANNKNVYLISGG 180
           MGGSVPFEEALAARLSLFKPSLS+V+++L+KRPPRLSPGI+ELVKKL+ANN +VYLISGG
Sbjct: 121 MGGSVPFEEALAARLSLFKPSLSKVEEYLDKRPPRLSPGIEELVKKLRANNIDVYLISGG 180

Query: 181 FRHMIN 186
           FR MIN
Sbjct: 181 FRQMIN 186

Catalyzes the last step in the biosynthesis of serine from carbohydrates. The reaction mechanism proceeds via the formation of a phosphoryl-enzyme intermediates. May be required preferentially for serine biosynthesis in non-photosynthetic tissues.
Arabidopsis thaliana (taxid: 3702)
EC: 3EC: .EC: 1EC: .EC: 3EC: .EC: 3

>sp|Q99LS3|SERB_MOUSE Phosphoserine phosphatase OS=Mus musculus GN=Psph PE=1 SV=1

 Score =  137 bits (346), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 70/126 (55%), Positives = 90/126 (71%), Gaps = 4/126 (3%)

Query: 75  EVLQLWRTADAVCFDVDSTVCVDEGIDELAEFCGAGKAVAEWTARAMGGSVPFEEALAAR 134
           E+ +L+ +ADAVCFDVDSTV  +EGIDELA+FCG   AV+E T RAMGG++PF++AL  R
Sbjct: 6   ELRKLFCSADAVCFDVDSTVIREEGIDELAKFCGVEAAVSEMTRRAMGGALPFKDALTQR 65

Query: 135 LSLFKPSLSQVQDFLEKRPPRLSPGIDELVKKLKANNKNVYLISGGFR----HMINILNI 190
           L+L +PS  QVQ  L + PP L+PGI ELV +L+  N  V+LISGGFR    H+   LNI
Sbjct: 66  LALIQPSRDQVQRLLAEHPPHLTPGIRELVSRLQERNVQVFLISGGFRSIVEHVAAKLNI 125

Query: 191 LKWDVL 196
              +V 
Sbjct: 126 PTTNVF 131

Catalyzes the last step in the biosynthesis of serine from carbohydrates. The reaction mechanism proceeds via the formation of a phosphoryl-enzyme intermediates.

Mus musculus (taxid: 10090)

EC: 3

EC: .

EC: 1

EC: .

EC: 3

EC: .

EC: 3

>sp|Q5M819|SERB_RAT Phosphoserine phosphatase OS=Rattus norvegicus GN=Psph PE=2 SV=1

 Score =  137 bits (346), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 70/126 (55%), Positives = 90/126 (71%), Gaps = 4/126 (3%)

Query: 75  EVLQLWRTADAVCFDVDSTVCVDEGIDELAEFCGAGKAVAEWTARAMGGSVPFEEALAAR 134
           E+ +L+ +ADAVCFDVDSTV  +EGIDELA+FCG   AV+E T RAMGG++PF++AL  R
Sbjct: 6   ELRKLFCSADAVCFDVDSTVIREEGIDELAKFCGVEAAVSEMTRRAMGGALPFKDALTER 65

Query: 135 LSLFKPSLSQVQDFLEKRPPRLSPGIDELVKKLKANNKNVYLISGGFR----HMINILNI 190
           L+L +PS  QVQ  L + PP L+PGI ELV +L+  N  V+LISGGFR    H+   LNI
Sbjct: 66  LALIQPSRDQVQRLLAEHPPHLTPGIRELVSRLQERNVQVFLISGGFRSIVEHVAAKLNI 125

Query: 191 LKWDVL 196
              +V 
Sbjct: 126 PTTNVF 131

Catalyzes the last step in the biosynthesis of serine from carbohydrates. The reaction mechanism proceeds via the formation of a phosphoryl-enzyme intermediates.

Rattus norvegicus (taxid: 10116)

EC: 3

EC: .

EC: 1

EC: .

EC: 3

EC: .

EC: 3

>sp|Q5RB83|SERB_PONAB Phosphoserine phosphatase OS=Pongo abelii GN=PSPH PE=2 SV=1

 Score =  137 bits (344), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 69/126 (54%), Positives = 90/126 (71%), Gaps = 4/126 (3%)

Query: 75  EVLQLWRTADAVCFDVDSTVCVDEGIDELAEFCGAGKAVAEWTARAMGGSVPFEEALAAR 134
           E+ +L+ +ADAVCFDVDSTV  +EGIDELA+ CG   AV+E T RAMGG+VPF+ AL  R
Sbjct: 6   ELRKLFYSADAVCFDVDSTVIREEGIDELAKICGVEDAVSEMTRRAMGGAVPFKAALTER 65

Query: 135 LSLFKPSLSQVQDFLEKRPPRLSPGIDELVKKLKANNKNVYLISGGFR----HMINILNI 190
           L+L +PS  QVQ  + ++PP L+PGI ELV +L+  N  V+LISGGFR    H+ + LNI
Sbjct: 66  LALIQPSREQVQRLIAEQPPHLTPGIRELVSRLQERNVQVFLISGGFRSIVEHVASKLNI 125

Query: 191 LKWDVL 196
              +V 
Sbjct: 126 PATNVF 131

Catalyzes the last step in the biosynthesis of serine from carbohydrates. The reaction mechanism proceeds via the formation of a phosphoryl-enzyme intermediates.

Pongo abelii (taxid: 9601)

EC: 3

EC: .

EC: 1

EC: .

EC: 3

EC: .

EC: 3

>sp|P78330|SERB_HUMAN Phosphoserine phosphatase OS=Homo sapiens GN=PSPH PE=1 SV=2

 Score =  137 bits (344), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 69/126 (54%), Positives = 90/126 (71%), Gaps = 4/126 (3%)

Query: 75  EVLQLWRTADAVCFDVDSTVCVDEGIDELAEFCGAGKAVAEWTARAMGGSVPFEEALAAR 134
           E+ +L+ +ADAVCFDVDSTV  +EGIDELA+ CG   AV+E T RAMGG+VPF+ AL  R
Sbjct: 6   ELRKLFYSADAVCFDVDSTVIREEGIDELAKICGVEDAVSEMTRRAMGGAVPFKAALTER 65

Query: 135 LSLFKPSLSQVQDFLEKRPPRLSPGIDELVKKLKANNKNVYLISGGFR----HMINILNI 190
           L+L +PS  QVQ  + ++PP L+PGI ELV +L+  N  V+LISGGFR    H+ + LNI
Sbjct: 66  LALIQPSREQVQRLIAEQPPHLTPGIRELVSRLQERNVQVFLISGGFRSIVEHVASKLNI 125

Query: 191 LKWDVL 196
              +V 
Sbjct: 126 PATNVF 131

Catalyzes the last step in the biosynthesis of serine from carbohydrates. The reaction mechanism proceeds via the formation of a phosphoryl-enzyme intermediates.

Homo sapiens (taxid: 9606)

EC: 3

EC: .

EC: 1

EC: .

EC: 3

EC: .

EC: 3

>sp|Q2KHU0|SERB_BOVIN Phosphoserine phosphatase OS=Bos taurus GN=PSPH PE=2 SV=1

 Score =  137 bits (344), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 70/126 (55%), Positives = 89/126 (70%), Gaps = 4/126 (3%)

Query: 75  EVLQLWRTADAVCFDVDSTVCVDEGIDELAEFCGAGKAVAEWTARAMGGSVPFEEALAAR 134
           E+  L+ +ADAVCFDVDSTV  +EGIDELA+FCG   AV+E T +AMGG+VPF+ AL  R
Sbjct: 6   ELRNLFCSADAVCFDVDSTVIQEEGIDELAKFCGVEDAVSEMTRQAMGGAVPFKAALTQR 65

Query: 135 LSLFKPSLSQVQDFLEKRPPRLSPGIDELVKKLKANNKNVYLISGGFR----HMINILNI 190
           L+L +PS  QVQ  L + PP L+PGI ELV +L+  N  V+LISGGFR    H+ + LNI
Sbjct: 66  LALIQPSREQVQRLLAEHPPHLTPGIRELVSRLQERNVQVFLISGGFRSIVEHVASKLNI 125

Query: 191 LKWDVL 196
              +V 
Sbjct: 126 PSTNVF 131

Catalyzes the last step in the biosynthesis of serine from carbohydrates. The reaction mechanism proceeds via the formation of a phosphoryl-enzyme intermediates.

Bos taurus (taxid: 9913)

EC: 3

EC: .

EC: 1

EC: .

EC: 3

EC: .

EC: 3

>sp|Q9VSY6|SERB_DROME Phosphoserine phosphatase OS=Drosophila melanogaster GN=aay PE=2 SV=1

 Score =  119 bits (298), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 55/100 (55%), Positives = 71/100 (71%)

Query: 86  VCFDVDSTVCVDEGIDELAEFCGAGKAVAEWTARAMGGSVPFEEALAARLSLFKPSLSQV 145
           VCFDVDSTV  +EGIDELAE+CG G  VA  T  AMGG++ F++AL  RL++ +P+  QV
Sbjct: 64  VCFDVDSTVICEEGIDELAEYCGKGSEVARVTKEAMGGAMTFQDALKIRLNIIRPTQQQV 123

Query: 146 QDFLEKRPPRLSPGIDELVKKLKANNKNVYLISGGFRHMI 185
           +DF+++RP  LS  +   V  LKA  K VYLISGGF  +I
Sbjct: 124 RDFIQERPSTLSKNVKRFVSHLKAEGKQVYLISGGFDCLI 163

Catalyzes the last step in the biosynthesis of serine from carbohydrates. The reaction mechanism proceeds via the formation of a phosphoryl-enzyme intermediates.

Drosophila melanogaster (taxid: 7227)

EC: 3

EC: .

EC: 1

EC: .

EC: 3

EC: .

EC: 3

>sp|O28142|SERB_ARCFU Phosphoserine phosphatase OS=Archaeoglobus fulgidus (strain ATCC 49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126) GN=AF_2138 PE=3 SV=1

 Score = 69.3 bits (168), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 41/103 (39%), Positives = 60/103 (58%), Gaps = 1/103 (0%)

Query: 86  VCFDVDSTVCVDEGIDELAEFCGAGKAVAEWTARAMGGSVPFEEALAARLSLFKPSLSQV 145
           + FD+DST+   E IDELA+  G G  V++ T RAM G + F+EAL  R+ L K    +V
Sbjct: 132 IVFDMDSTLVEAEIIDELAKEAGVGDEVSKLTERAMRGEIGFKEALEERVRLLKGLPVEV 191

Query: 146 QDFLEKRPPRLSPGIDELVKKLKANNKNVYLISGGFRHMINIL 188
            + +  R  +L+ G  ELV+ LK     V ++SGGF +  + L
Sbjct: 192 LERIYSR-IKLTEGAKELVRSLKEAGYKVAVVSGGFSYFTDRL 233

Archaeoglobus fulgidus (strain ATCC 49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126) (taxid: 224325)

EC: 3

EC: .

EC: 1

EC: .

EC: 3

EC: .

EC: 3

>sp|P0AGB2|SERB_SHIFL Phosphoserine phosphatase OS=Shigella flexneri GN=serB PE=3 SV=1

 Score = 63.2 bits (152), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 38/101 (37%), Positives = 57/101 (56%), Gaps = 1/101 (0%)

Query: 81  RTADAVCFDVDSTVCVDEGIDELAEFCGAGKAVAEWTARAMGGSVPFEEALAARLSLFKP 140
           RT   +  D+DST    E IDE+A+  G G+ VAE T RAM G + F  +L +R++  K 
Sbjct: 108 RTPGLLVMDMDSTAIQIECIDEIAKLAGTGEMVAEVTERAMRGELDFTASLRSRVATLKG 167

Query: 141 SLSQVQDFLEKRPPRLSPGIDELVKKLKANNKNVYLISGGF 181
           + + +   + +  P L PG+ +LV KL+     V + SGGF
Sbjct: 168 ADANILQQVRENLP-LMPGLTQLVLKLETLGWKVAIASGGF 207

Catalyzes the dephosphorylation of phosphoserine (P-Ser).

Shigella flexneri (taxid: 623)

EC: 3

EC: .

EC: 1

EC: .

EC: 3

EC: .

EC: 3

>sp|P0AGB0|SERB_ECOLI Phosphoserine phosphatase OS=Escherichia coli (strain K12) GN=serB PE=1 SV=1

 Score = 63.2 bits (152), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 38/101 (37%), Positives = 57/101 (56%), Gaps = 1/101 (0%)

Query: 81  RTADAVCFDVDSTVCVDEGIDELAEFCGAGKAVAEWTARAMGGSVPFEEALAARLSLFKP 140
           RT   +  D+DST    E IDE+A+  G G+ VAE T RAM G + F  +L +R++  K 
Sbjct: 108 RTPGLLVMDMDSTAIQIECIDEIAKLAGTGEMVAEVTERAMRGELDFTASLRSRVATLKG 167

Query: 141 SLSQVQDFLEKRPPRLSPGIDELVKKLKANNKNVYLISGGF 181
           + + +   + +  P L PG+ +LV KL+     V + SGGF
Sbjct: 168 ADANILQQVRENLP-LMPGLTQLVLKLETLGWKVAIASGGF 207

Catalyzes the dephosphorylation of phosphoserine (P-Ser). Also catalyzes the hydrolysis of phosphothreonine (P-Thr).

Escherichia coli (strain K12) (taxid: 83333)

EC: 3

EC: .

EC: 1

EC: .

EC: 3

EC: .

EC: 3

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	203
225457217	294	PREDICTED: phosphoserine phosphatase, ch	0.906	0.625	0.775	2e-76
224121470	295	predicted protein [Populus trichocarpa]	0.916	0.630	0.752	2e-76
255547199	295	phosphoserine phosphatase, putative [Ric	0.916	0.630	0.715	1e-72
449440850	295	PREDICTED: phosphoserine phosphatase, ch	0.916	0.630	0.682	2e-68
3759177	295	3-phosphoserine phosphatase [Arabidopsis	0.916	0.630	0.682	2e-67
42571535	295	phosphoserine phosphatase [Arabidopsis t	0.916	0.630	0.682	2e-67
297850248	295	3-phosphoserine phosphatase [Arabidopsis	0.916	0.630	0.679	4e-67
255644947	208	unknown [Glycine max]	0.926	0.903	0.689	6e-66
356508496	294	PREDICTED: phosphoserine phosphatase, ch	0.901	0.622	0.696	5e-65
336441831	296	phosphoserine phosphatase [Brassica junc	0.916	0.628	0.647	4e-62

>gi|225457217|ref|XP_002284065.1| PREDICTED: phosphoserine phosphatase, chloroplastic [Vitis vinifera] gi|297733874|emb|CBI15121.3| unnamed protein product [Vitis vinifera]

 Score =  290 bits (743), Expect = 2e-76,   Method: Compositional matrix adjust.
 Identities = 145/187 (77%), Positives = 157/187 (83%), Gaps = 3/187 (1%)

Query: 1   MEGLVRSQISPIGAHYKQQHSVFIPKF-SLKLRTNLCRARVGMMKHSKSFNSVAASVQPL 59
           MEGL+R + +PI  H  + HS  +P F +L+L     R   GMMKH KSFNSV ASVQPL
Sbjct: 1   MEGLMRVRTNPIHLHCGRHHSPSLPAFPTLQLHKKFYRNSFGMMKHPKSFNSVVASVQPL 60

Query: 60  EASALGRSENTLPSKEVLQLWRTADAVCFDVDSTVCVDEGIDELAEFCGAGKAVAEWTAR 119
           EAS   R +NTLPSKE+L+LW+ ADAVCFDVDSTVCVDEGIDELAEFCGAGKAVAEWTAR
Sbjct: 61  EAST--RFDNTLPSKEILELWQDADAVCFDVDSTVCVDEGIDELAEFCGAGKAVAEWTAR 118

Query: 120 AMGGSVPFEEALAARLSLFKPSLSQVQDFLEKRPPRLSPGIDELVKKLKANNKNVYLISG 179
           AMGGSVPFEEALAARLSLFKPSLSQVQDFLEKRPPR+SPGID LVKKLKA N NVYLISG
Sbjct: 119 AMGGSVPFEEALAARLSLFKPSLSQVQDFLEKRPPRISPGIDVLVKKLKARNTNVYLISG 178

Query: 180 GFRHMIN 186
           GFR MIN
Sbjct: 179 GFRQMIN 185

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224121470|ref|XP_002318590.1| predicted protein [Populus trichocarpa] gi|118484409|gb|ABK94081.1| unknown [Populus trichocarpa] gi|222859263|gb|EEE96810.1| predicted protein [Populus trichocarpa]

 Score =  290 bits (743), Expect = 2e-76,   Method: Compositional matrix adjust.
 Identities = 140/186 (75%), Positives = 156/186 (83%)

Query: 1   MEGLVRSQISPIGAHYKQQHSVFIPKFSLKLRTNLCRARVGMMKHSKSFNSVAASVQPLE 60
           MEGLV  +I+PI A  +Q HS  +P FSL L  N  +  V  MK  +SFNSV ASVQPL+
Sbjct: 1   MEGLVHYRINPIHATRRQYHSCLVPAFSLLLSKNFTKTPVLFMKGHRSFNSVVASVQPLD 60

Query: 61  ASALGRSENTLPSKEVLQLWRTADAVCFDVDSTVCVDEGIDELAEFCGAGKAVAEWTARA 120
           AS LG  +NTLPSK +LQLWR+ADAVCFDVDSTVC+DEGIDELAEFCGAGKAVA+WTARA
Sbjct: 61  ASGLGHFDNTLPSKVILQLWRSADAVCFDVDSTVCLDEGIDELAEFCGAGKAVADWTARA 120

Query: 121 MGGSVPFEEALAARLSLFKPSLSQVQDFLEKRPPRLSPGIDELVKKLKANNKNVYLISGG 180
           MGGSVPFEEALAARLSLFKPSL QVQ+FLE RPP++SPGI+ELVKKLKA N NVYLISGG
Sbjct: 121 MGGSVPFEEALAARLSLFKPSLPQVQEFLETRPPKISPGINELVKKLKAKNTNVYLISGG 180

Query: 181 FRHMIN 186
           FR MIN
Sbjct: 181 FRQMIN 186

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255547199|ref|XP_002514657.1| phosphoserine phosphatase, putative [Ricinus communis] gi|223546261|gb|EEF47763.1| phosphoserine phosphatase, putative [Ricinus communis]

 Score =  278 bits (710), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 133/186 (71%), Positives = 153/186 (82%)

Query: 1   MEGLVRSQISPIGAHYKQQHSVFIPKFSLKLRTNLCRARVGMMKHSKSFNSVAASVQPLE 60
           MEGLV SQI P+    +Q  S  IP FSL L++N    R   M+ +++FNS  ASVQPL+
Sbjct: 1   MEGLVHSQIGPVRITCRQYRSCLIPAFSLHLKSNFIGVRNLSMRLTQAFNSATASVQPLD 60

Query: 61  ASALGRSENTLPSKEVLQLWRTADAVCFDVDSTVCVDEGIDELAEFCGAGKAVAEWTARA 120
            + +   +N LPSKEVL+LWR+ADAVCFDVDSTVC+DEGIDELAE+CGAG AVAEWTA+A
Sbjct: 61  PAKVDHFDNRLPSKEVLELWRSADAVCFDVDSTVCLDEGIDELAEYCGAGNAVAEWTAKA 120

Query: 121 MGGSVPFEEALAARLSLFKPSLSQVQDFLEKRPPRLSPGIDELVKKLKANNKNVYLISGG 180
           MGGSVPFEEALAARLSLFKPSLSQV DFLEKRPP+LSPGI+EL+KKLKA N NVYLISGG
Sbjct: 121 MGGSVPFEEALAARLSLFKPSLSQVHDFLEKRPPKLSPGIEELIKKLKAKNTNVYLISGG 180

Query: 181 FRHMIN 186
           FR MIN
Sbjct: 181 FRQMIN 186

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449440850|ref|XP_004138197.1| PREDICTED: phosphoserine phosphatase, chloroplastic-like [Cucumis sativus]

 Score =  263 bits (673), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 127/186 (68%), Positives = 150/186 (80%)

Query: 1   MEGLVRSQISPIGAHYKQQHSVFIPKFSLKLRTNLCRARVGMMKHSKSFNSVAASVQPLE 60
           ME L+ ++I P+  H +Q HS F PK  L+    L +  + M +   SFN +AASVQP+E
Sbjct: 1   MESLLSARIKPLPTHCRQIHSSFRPKLFLQFARRLDKGGMEMGRCGMSFNPIAASVQPIE 60

Query: 61  ASALGRSENTLPSKEVLQLWRTADAVCFDVDSTVCVDEGIDELAEFCGAGKAVAEWTARA 120
              L +  NT PSKE L+LWR+A+AVCFDVDSTVCVDEGIDELA+FCGAG+AVAEWTARA
Sbjct: 61  GPTLSKFNNTSPSKEALELWRSANAVCFDVDSTVCVDEGIDELADFCGAGEAVAEWTARA 120

Query: 121 MGGSVPFEEALAARLSLFKPSLSQVQDFLEKRPPRLSPGIDELVKKLKANNKNVYLISGG 180
           MGGSVPFE+ALAARLSLF PSLSQV++FL K+PPRLSPGIDELVKKLKAN+ +VYLISGG
Sbjct: 121 MGGSVPFEDALAARLSLFNPSLSQVEEFLAKKPPRLSPGIDELVKKLKANSIDVYLISGG 180

Query: 181 FRHMIN 186
           FR MIN
Sbjct: 181 FRQMIN 186

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|3759177|dbj|BAA33806.1| 3-phosphoserine phosphatase [Arabidopsis thaliana] gi|3759179|dbj|BAA33807.1| 3-phosphoserin phosphatase [Arabidopsis thaliana]

 Score =  261 bits (666), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 127/186 (68%), Positives = 147/186 (79%)

Query: 1   MEGLVRSQISPIGAHYKQQHSVFIPKFSLKLRTNLCRARVGMMKHSKSFNSVAASVQPLE 60
           ME L  S++ P+    ++  S+F     L+LR   CR  V +M H K    V ASVQP E
Sbjct: 1   MEALTTSRVVPVQVPCRKLSSLFANFSCLELRRYPCRGLVSIMNHPKLLRPVTASVQPHE 60

Query: 61  ASALGRSENTLPSKEVLQLWRTADAVCFDVDSTVCVDEGIDELAEFCGAGKAVAEWTARA 120
            S LG   N +PSKE+L LWR+ +AVCFDVDSTVCVDEGIDELAEFCGAGKAVAEWTARA
Sbjct: 61  LSTLGHEGNIVPSKEILDLWRSVEAVCFDVDSTVCVDEGIDELAEFCGAGKAVAEWTARA 120

Query: 121 MGGSVPFEEALAARLSLFKPSLSQVQDFLEKRPPRLSPGIDELVKKLKANNKNVYLISGG 180
           MGGSVPFEEALAARLSLFKPSLS+V+++L+KRPPRLSPGI+ELVKKL+ANN +VYLISGG
Sbjct: 121 MGGSVPFEEALAARLSLFKPSLSKVEEYLDKRPPRLSPGIEELVKKLRANNIDVYLISGG 180

Query: 181 FRHMIN 186
           FR MIN
Sbjct: 181 FRQMIN 186

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|42571535|ref|NP_973858.1| phosphoserine phosphatase [Arabidopsis thaliana] gi|62900892|sp|O82796.2|SERB_ARATH RecName: Full=Phosphoserine phosphatase, chloroplastic; Short=PSP; Short=PSPase; AltName: Full=O-phosphoserine phosphohydrolase; Flags: Precursor gi|9795592|gb|AAF98410.1|AC026238_2 3-phosphoserine phosphatase [Arabidopsis thaliana] gi|17529132|gb|AAL38792.1| putative 3-phosphoserine phosphatase [Arabidopsis thaliana] gi|20465705|gb|AAM20321.1| putative 3-phosphoserine phosphatase [Arabidopsis thaliana] gi|21592986|gb|AAM64935.1| 3-phosphoserine phosphatase [Arabidopsis thaliana] gi|332191617|gb|AEE29738.1| phosphoserine phosphatase [Arabidopsis thaliana]

 Score =  261 bits (666), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 127/186 (68%), Positives = 147/186 (79%)

Query: 1   MEGLVRSQISPIGAHYKQQHSVFIPKFSLKLRTNLCRARVGMMKHSKSFNSVAASVQPLE 60
           ME L  S++ P+    ++  S+F     L+LR   CR  V +M H K    V ASVQP E
Sbjct: 1   MEALTTSRVVPVQVPCRKLSSLFANFSCLELRRYPCRGLVSIMNHPKLLRPVTASVQPHE 60

Query: 61  ASALGRSENTLPSKEVLQLWRTADAVCFDVDSTVCVDEGIDELAEFCGAGKAVAEWTARA 120
            S LG   N +PSKE+L LWR+ +AVCFDVDSTVCVDEGIDELAEFCGAGKAVAEWTARA
Sbjct: 61  LSTLGHEGNIVPSKEILDLWRSVEAVCFDVDSTVCVDEGIDELAEFCGAGKAVAEWTARA 120

Query: 121 MGGSVPFEEALAARLSLFKPSLSQVQDFLEKRPPRLSPGIDELVKKLKANNKNVYLISGG 180
           MGGSVPFEEALAARLSLFKPSLS+V+++L+KRPPRLSPGI+ELVKKL+ANN +VYLISGG
Sbjct: 121 MGGSVPFEEALAARLSLFKPSLSKVEEYLDKRPPRLSPGIEELVKKLRANNIDVYLISGG 180

Query: 181 FRHMIN 186
           FR MIN
Sbjct: 181 FRQMIN 186

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297850248|ref|XP_002893005.1| 3-phosphoserine phosphatase [Arabidopsis lyrata subsp. lyrata] gi|297338847|gb|EFH69264.1| 3-phosphoserine phosphatase [Arabidopsis lyrata subsp. lyrata]

 Score =  259 bits (663), Expect = 4e-67,   Method: Compositional matrix adjust.
 Identities = 127/187 (67%), Positives = 148/187 (79%), Gaps = 1/187 (0%)

Query: 1   MEGLVRSQISPIGAHYKQQ-HSVFIPKFSLKLRTNLCRARVGMMKHSKSFNSVAASVQPL 59
           ME +  S++ P+    ++Q  S+F     ++LR   CR  V +M H K    V ASVQP 
Sbjct: 1   MEAIATSRVVPVQLPCRRQLSSLFANSSCIELRRYPCRGLVSIMHHPKLLRPVTASVQPQ 60

Query: 60  EASALGRSENTLPSKEVLQLWRTADAVCFDVDSTVCVDEGIDELAEFCGAGKAVAEWTAR 119
           E SALG   N +PSKE+L LWR+ +AVCFDVDSTVCVDEGIDELAEFCGAGKAVAEWTAR
Sbjct: 61  ELSALGNESNVVPSKEILDLWRSVEAVCFDVDSTVCVDEGIDELAEFCGAGKAVAEWTAR 120

Query: 120 AMGGSVPFEEALAARLSLFKPSLSQVQDFLEKRPPRLSPGIDELVKKLKANNKNVYLISG 179
           AMGGSVPFEEALAARLSLFKPSLS+V+++LE RPPRLSPGI+ELVKKL+ANN +VYLISG
Sbjct: 121 AMGGSVPFEEALAARLSLFKPSLSKVEEYLENRPPRLSPGIEELVKKLRANNIDVYLISG 180

Query: 180 GFRHMIN 186
           GFR MIN
Sbjct: 181 GFRQMIN 187

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255644947|gb|ACU22973.1| unknown [Glycine max]

 Score =  255 bits (652), Expect = 6e-66,   Method: Compositional matrix adjust.
 Identities = 133/193 (68%), Positives = 150/193 (77%), Gaps = 5/193 (2%)

Query: 1   MEGLVRSQISPIGAHYKQQH-SVFIPKFSLKLRTN-LCRARVGMMKHSKSFNSVAASVQP 58
           MEGLV S I+ +       H S F+P  +L LR N LC   +G+ K +K  + VAASV  
Sbjct: 1   MEGLVSSGINTVRVFSITNHQSRFLPSSTLHLRNNSLCGFGIGVEKKNKQCSVVAASVG- 59

Query: 59  LEASALGRSENTLPSKEVLQLWRTADAVCFDVDSTVCVDEGIDELAEFCGAGKAVAEWTA 118
              S +G  ENTLPSKEVL+LWR  DAVCFDVDSTVC+DEGIDELAEFCGAGKAVAEWTA
Sbjct: 60  --GSKVGHFENTLPSKEVLELWRNGDAVCFDVDSTVCLDEGIDELAEFCGAGKAVAEWTA 117

Query: 119 RAMGGSVPFEEALAARLSLFKPSLSQVQDFLEKRPPRLSPGIDELVKKLKANNKNVYLIS 178
           RAMGGSVPFEEALAARLSLF PSLSQ+QDFLE++PPRLSPGI+ELV+KLKAN   VYLIS
Sbjct: 118 RAMGGSVPFEEALAARLSLFNPSLSQLQDFLEQKPPRLSPGIEELVQKLKANGIVVYLIS 177

Query: 179 GGFRHMINILNIL 191
           GGFR MIN+  I 
Sbjct: 178 GGFRQMINVQRIF 190

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356508496|ref|XP_003522992.1| PREDICTED: phosphoserine phosphatase, chloroplastic-like [Glycine max]

 Score =  252 bits (644), Expect = 5e-65,   Method: Compositional matrix adjust.
 Identities = 131/188 (69%), Positives = 148/188 (78%), Gaps = 5/188 (2%)

Query: 1   MEGLVRSQISPIGAHYKQQH-SVFIPKFSLKLRTN-LCRARVGMMKHSKSFNSVAASVQP 58
           MEGLV S I+ +       H S F+P  +L LR N LC   +G+ K +K  + VAASV  
Sbjct: 1   MEGLVSSGINTVRVFSITNHQSRFLPSSTLHLRNNSLCGFGIGVEKKNKQCSVVAASVG- 59

Query: 59  LEASALGRSENTLPSKEVLQLWRTADAVCFDVDSTVCVDEGIDELAEFCGAGKAVAEWTA 118
              S +G  ENTLPSKEVL+LWR  DAVCFDVDSTVC+DEGIDELAEFCGAGKAVAEWTA
Sbjct: 60  --GSKVGHFENTLPSKEVLELWRNGDAVCFDVDSTVCLDEGIDELAEFCGAGKAVAEWTA 117

Query: 119 RAMGGSVPFEEALAARLSLFKPSLSQVQDFLEKRPPRLSPGIDELVKKLKANNKNVYLIS 178
           RAMGGSVPFEEALAARLSLF PSLSQ+Q+FLE++PPRLSPGI+ELV+KLKAN   VYLIS
Sbjct: 118 RAMGGSVPFEEALAARLSLFNPSLSQLQNFLEQKPPRLSPGIEELVQKLKANGIVVYLIS 177

Query: 179 GGFRHMIN 186
           GGFR MIN
Sbjct: 178 GGFRQMIN 185

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|336441831|gb|ADM15724.2| phosphoserine phosphatase [Brassica juncea]

 Score =  243 bits (619), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 121/187 (64%), Positives = 145/187 (77%), Gaps = 1/187 (0%)

Query: 1   MEGLVRSQISPIGAHYKQQHSVFIPKFSLKLRTN-LCRARVGMMKHSKSFNSVAASVQPL 59
           ME L+ S++ P+    ++  S+      L+LR   + R  V +M +S+    V ASVQP 
Sbjct: 1   MEALLTSRVVPVQVPCRKLSSLSADLSCLELRRYPVRRGSVSIMSYSRLVRPVTASVQPQ 60

Query: 60  EASALGRSENTLPSKEVLQLWRTADAVCFDVDSTVCVDEGIDELAEFCGAGKAVAEWTAR 119
             SALG   NT+PSKE+L LWR  +AVCFDVDSTVCVDEGIDELAEFCGAGKAVAEWTAR
Sbjct: 61  RVSALGNEGNTVPSKEILDLWRGVEAVCFDVDSTVCVDEGIDELAEFCGAGKAVAEWTAR 120

Query: 120 AMGGSVPFEEALAARLSLFKPSLSQVQDFLEKRPPRLSPGIDELVKKLKANNKNVYLISG 179
           AMGGSVPFEEALAARLSLFKPSLS+V ++L+K PPRLSPGI+ELVKKL+AN + ++LISG
Sbjct: 121 AMGGSVPFEEALAARLSLFKPSLSKVDEYLQKTPPRLSPGIEELVKKLRANKRGLFLISG 180

Query: 180 GFRHMIN 186
           GFR MIN
Sbjct: 181 GFRQMIN 187

Source: Brassica juncea

Species: Brassica juncea

Genus: Brassica

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	203
TAIR|locus:2027433	295	PSP "AT1G18640" [Arabidopsis t	0.940	0.647	0.625	1.4e-57
UNIPROTKB|E1C9F4	226	PSPH "Uncharacterized protein"	0.546	0.491	0.540	2.8e-27
WB|WBGene00013379	279	Y62E10A.13 [Caenorhabditis ele	0.630	0.458	0.5	5.7e-27
UNIPROTKB|F1RIU1	225	PSPH "Uncharacterized protein"	0.571	0.515	0.533	1.9e-26
MGI|MGI:97788	225	Psph "phosphoserine phosphatas	0.546	0.493	0.540	1.9e-26
RGD|1308764	225	Psph "phosphoserine phosphatas	0.546	0.493	0.540	1.9e-26
UNIPROTKB|E2RPN5	231	PSPH "Uncharacterized protein"	0.571	0.502	0.533	2.5e-26
UNIPROTKB|Q2KHU0	225	PSPH "Phosphoserine phosphatas	0.571	0.515	0.533	3.2e-26
UNIPROTKB|C9JBI3	187	PSPH "Phosphoserine phosphatas	0.571	0.620	0.525	5.2e-26
UNIPROTKB|P78330	225	PSPH "Phosphoserine phosphatas	0.571	0.515	0.525	5.2e-26

TAIR|locus:2027433 PSP "AT1G18640" [Arabidopsis thaliana (taxid:3702)]

 Score = 592 (213.5 bits), Expect = 1.4e-57, P = 1.4e-57
 Identities = 120/192 (62%), Positives = 140/192 (72%)

Query:     1 MEGLVRSQISPIGAHYKQQHSVFIPKFSLKLRTNLCRARVGMMKHSKSFNSVAASVQPLE 60
             ME L  S++ P+    ++  S+F     L+LR   CR  V +M H K    V ASVQP E
Sbjct:     1 MEALTTSRVVPVQVPCRKLSSLFANFSCLELRRYPCRGLVSIMNHPKLLRPVTASVQPHE 60

Query:    61 ASALGRSENTLPSKEVLQLWRTADAVCFDVDSTVCVDEGIDELAEFCGAGKAVAEWTARA 120
              S LG   N +PSKE+L LWR+ +AVCFDVDSTVCVDEGIDELAEFCGAGKAVAEWTARA
Sbjct:    61 LSTLGHEGNIVPSKEILDLWRSVEAVCFDVDSTVCVDEGIDELAEFCGAGKAVAEWTARA 120

Query:   121 MGGSVPFEEALAARLSLFKPSLSQVQDFLEKRPPRLSPGIDEXXXXXXXXXXXXYLISGG 180
             MGGSVPFEEALAARLSLFKPSLS+V+++L+KRPPRLSPGI+E            YLISGG
Sbjct:   121 MGGSVPFEEALAARLSLFKPSLSKVEEYLDKRPPRLSPGIEELVKKLRANNIDVYLISGG 180

Query:   181 FRHMIN-ILNIL 191
             FR MIN + +IL
Sbjct:   181 FRQMINPVASIL 192

GO:0000287 "magnesium ion binding" evidence=IBA

GO:0003824 "catalytic activity" evidence=IEA

GO:0004647 "phosphoserine phosphatase activity" evidence=IEA;IDA

GO:0006564 "L-serine biosynthetic process" evidence=IEA;IBA;TAS

GO:0008152 "metabolic process" evidence=IEA

GO:0009507 "chloroplast" evidence=ISM;IDA

GO:0016791 "phosphatase activity" evidence=IEA

UNIPROTKB|E1C9F4 PSPH "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 306 (112.8 bits), Expect = 2.8e-27, P = 2.8e-27
 Identities = 60/111 (54%), Positives = 77/111 (69%)

Query:    75 EVLQLWRTADAVCFDVDSTVCVDEGIDELAEFCGAGKAVAEWTARAMGGSVPFEEALAAR 134
             E+ +++R ADAVCFDVDSTV  +EGIDELA+FCG G AVAE T RAMGG+V F+ AL AR
Sbjct:     6 EMKEIFRNADAVCFDVDSTVIREEGIDELAKFCGVGDAVAEMTRRAMGGTVTFKAALTAR 65

Query:   135 LSLFKPSLSQVQDFLEKRPPRLSPGIDEXXXXXXXXXXXXYLISGGFRHMI 185
             L L +PS  QVQ  +   PP+L+PGI E            +L+SGGF+ ++
Sbjct:    66 LGLIRPSYEQVQKLISDNPPQLTPGIRELVNRLHQRGVQVFLVSGGFQSIV 116

GO:0004647 "phosphoserine phosphatase activity" evidence=IEA

GO:0006564 "L-serine biosynthetic process" evidence=IEA

GO:0000287 "magnesium ion binding" evidence=IEA

GO:0005509 "calcium ion binding" evidence=IEA

GO:0042803 "protein homodimerization activity" evidence=IEA

WB|WBGene00013379 Y62E10A.13 [Caenorhabditis elegans (taxid:6239)]

 Score = 303 (111.7 bits), Expect = 5.7e-27, P = 5.7e-27
 Identities = 68/136 (50%), Positives = 85/136 (62%)

Query:    58 PLEASALGRSENTLP----SK----EVLQLWRTADAVCFDVDSTVCVDEGIDELAEFCGA 109
             P  ASA+ RS +T P    SK    EV ++WR ADAVCFDVDSTVC DEGIDELA + G 
Sbjct:    23 PTTASAIPRSISTSPGETISKNHEEEVKRVWRKADAVCFDVDSTVCQDEGIDELAAYLGV 82

Query:   110 GKAVAEWTARAMGGSVPFEEALAARLSLFKPSLSQVQDFLEKRPPRLSPGIDEXXXXXXX 169
             G+AVA  T  AM G+  F +ALAARL + KP+  Q++ F+    P+L+ GI E       
Sbjct:    83 GEAVANVTRTAMNGNARFRDALAARLQVMKPNHEQLEQFVNISKPKLTVGIRELVSRLHA 142

Query:   170 XXXXXYLISGGFRHMI 185
                  YL+SGGFR +I
Sbjct:   143 RGTHVYLVSGGFRRLI 158

GO:0004647 "phosphoserine phosphatase activity" evidence=IEA

GO:0006564 "L-serine biosynthetic process" evidence=IEA

GO:0003824 "catalytic activity" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

GO:0016791 "phosphatase activity" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

UNIPROTKB|F1RIU1 PSPH "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 298 (110.0 bits), Expect = 1.9e-26, P = 1.9e-26
 Identities = 64/120 (53%), Positives = 81/120 (67%)

Query:    75 EVLQLWRTADAVCFDVDSTVCVDEGIDELAEFCGAGKAVAEWTARAMGGSVPFEEALAAR 134
             E+ +L+ +ADAVCFDVDSTV  +EGIDELA+FCG   AV+E T RAMGG+VPF+ AL  R
Sbjct:     6 ELRKLFCSADAVCFDVDSTVIREEGIDELAKFCGVEDAVSEMTRRAMGGAVPFKAALTER 65

Query:   135 LSLFKPSLSQVQDFLEKRPPRLSPGIDEXXXXXXXXXXXXYLISGGFR----HMINILNI 190
             L+L +PS  QVQ  + + PP L+PGI E            +LISGGFR    H+ + LNI
Sbjct:    66 LALIQPSREQVQRLIAEHPPHLTPGIRELVSRLQERNVQVFLISGGFRSIVEHVASKLNI 125

GO:0042803 "protein homodimerization activity" evidence=IEA

GO:0005509 "calcium ion binding" evidence=IEA

GO:0000287 "magnesium ion binding" evidence=IEA

GO:0006564 "L-serine biosynthetic process" evidence=IEA

GO:0004647 "phosphoserine phosphatase activity" evidence=IEA

MGI|MGI:97788 Psph "phosphoserine phosphatase" [Mus musculus (taxid:10090)]

 Score = 298 (110.0 bits), Expect = 1.9e-26, P = 1.9e-26
 Identities = 60/111 (54%), Positives = 78/111 (70%)

Query:    75 EVLQLWRTADAVCFDVDSTVCVDEGIDELAEFCGAGKAVAEWTARAMGGSVPFEEALAAR 134
             E+ +L+ +ADAVCFDVDSTV  +EGIDELA+FCG   AV+E T RAMGG++PF++AL  R
Sbjct:     6 ELRKLFCSADAVCFDVDSTVIREEGIDELAKFCGVEAAVSEMTRRAMGGALPFKDALTQR 65

Query:   135 LSLFKPSLSQVQDFLEKRPPRLSPGIDEXXXXXXXXXXXXYLISGGFRHMI 185
             L+L +PS  QVQ  L + PP L+PGI E            +LISGGFR ++
Sbjct:    66 LALIQPSRDQVQRLLAEHPPHLTPGIRELVSRLQERNVQVFLISGGFRSIV 116

GO:0000287 "magnesium ion binding" evidence=ISO;IBA

GO:0004647 "phosphoserine phosphatase activity" evidence=ISO;IBA

GO:0005509 "calcium ion binding" evidence=ISO

GO:0005737 "cytoplasm" evidence=IBA

GO:0006563 "L-serine metabolic process" evidence=ISO

GO:0006564 "L-serine biosynthetic process" evidence=IBA

GO:0008152 "metabolic process" evidence=IEA

GO:0008652 "cellular amino acid biosynthetic process" evidence=IEA

GO:0016787 "hydrolase activity" evidence=IEA

GO:0016791 "phosphatase activity" evidence=IEA

GO:0042803 "protein homodimerization activity" evidence=ISO

GO:0043005 "neuron projection" evidence=ISO

GO:0046872 "metal ion binding" evidence=IEA

RGD|1308764 Psph "phosphoserine phosphatase" [Rattus norvegicus (taxid:10116)]

 Score = 298 (110.0 bits), Expect = 1.9e-26, P = 1.9e-26
 Identities = 60/111 (54%), Positives = 78/111 (70%)

Query:    75 EVLQLWRTADAVCFDVDSTVCVDEGIDELAEFCGAGKAVAEWTARAMGGSVPFEEALAAR 134
             E+ +L+ +ADAVCFDVDSTV  +EGIDELA+FCG   AV+E T RAMGG++PF++AL  R
Sbjct:     6 ELRKLFCSADAVCFDVDSTVIREEGIDELAKFCGVEAAVSEMTRRAMGGALPFKDALTER 65

Query:   135 LSLFKPSLSQVQDFLEKRPPRLSPGIDEXXXXXXXXXXXXYLISGGFRHMI 185
             L+L +PS  QVQ  L + PP L+PGI E            +LISGGFR ++
Sbjct:    66 LALIQPSRDQVQRLLAEHPPHLTPGIRELVSRLQERNVQVFLISGGFRSIV 116

GO:0000287 "magnesium ion binding" evidence=ISO;ISS;IBA

GO:0003674 "molecular_function" evidence=ND

GO:0004647 "phosphoserine phosphatase activity" evidence=ISO;ISS;IBA

GO:0005509 "calcium ion binding" evidence=ISO;ISS

GO:0005737 "cytoplasm" evidence=IBA

GO:0006563 "L-serine metabolic process" evidence=ISO;ISS

GO:0006564 "L-serine biosynthetic process" evidence=IBA

GO:0009612 "response to mechanical stimulus" evidence=IEP

GO:0031667 "response to nutrient levels" evidence=IEP

GO:0033574 "response to testosterone stimulus" evidence=IEP

GO:0042803 "protein homodimerization activity" evidence=IEA;ISO

GO:0043005 "neuron projection" evidence=IDA

UNIPROTKB|E2RPN5 PSPH "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 297 (109.6 bits), Expect = 2.5e-26, P = 2.5e-26
 Identities = 64/120 (53%), Positives = 80/120 (66%)

Query:    75 EVLQLWRTADAVCFDVDSTVCVDEGIDELAEFCGAGKAVAEWTARAMGGSVPFEEALAAR 134
             E+ +L+ +ADAVCFDVDSTV  +EGIDELA FCG   AV+E T RAMGG+VPF+ AL  R
Sbjct:    12 ELRKLFCSADAVCFDVDSTVIREEGIDELARFCGVEDAVSEMTRRAMGGAVPFKAALTER 71

Query:   135 LSLFKPSLSQVQDFLEKRPPRLSPGIDEXXXXXXXXXXXXYLISGGFR----HMINILNI 190
             L+L +PS  QVQ  + + PP L+PGI E            +LISGGFR    H+ + LNI
Sbjct:    72 LALIQPSREQVQRLIAEHPPHLTPGIRELVSHLQERNVQVFLISGGFRSIVEHVASKLNI 131

GO:0042803 "protein homodimerization activity" evidence=IEA

GO:0005509 "calcium ion binding" evidence=IEA

GO:0000287 "magnesium ion binding" evidence=IEA

GO:0006564 "L-serine biosynthetic process" evidence=IEA

GO:0004647 "phosphoserine phosphatase activity" evidence=IEA

UNIPROTKB|Q2KHU0 PSPH "Phosphoserine phosphatase" [Bos taurus (taxid:9913)]

 Score = 296 (109.3 bits), Expect = 3.2e-26, P = 3.2e-26
 Identities = 64/120 (53%), Positives = 80/120 (66%)

Query:    75 EVLQLWRTADAVCFDVDSTVCVDEGIDELAEFCGAGKAVAEWTARAMGGSVPFEEALAAR 134
             E+  L+ +ADAVCFDVDSTV  +EGIDELA+FCG   AV+E T +AMGG+VPF+ AL  R
Sbjct:     6 ELRNLFCSADAVCFDVDSTVIQEEGIDELAKFCGVEDAVSEMTRQAMGGAVPFKAALTQR 65

Query:   135 LSLFKPSLSQVQDFLEKRPPRLSPGIDEXXXXXXXXXXXXYLISGGFR----HMINILNI 190
             L+L +PS  QVQ  L + PP L+PGI E            +LISGGFR    H+ + LNI
Sbjct:    66 LALIQPSREQVQRLLAEHPPHLTPGIRELVSRLQERNVQVFLISGGFRSIVEHVASKLNI 125

GO:0004647 "phosphoserine phosphatase activity" evidence=ISS

GO:0005509 "calcium ion binding" evidence=ISS

GO:0000287 "magnesium ion binding" evidence=ISS

GO:0006563 "L-serine metabolic process" evidence=ISS

GO:0006564 "L-serine biosynthetic process" evidence=ISS

GO:0005737 "cytoplasm" evidence=ISS

GO:0042803 "protein homodimerization activity" evidence=IEA

UNIPROTKB|C9JBI3 PSPH "Phosphoserine phosphatase" [Homo sapiens (taxid:9606)]

 Score = 294 (108.6 bits), Expect = 5.2e-26, P = 5.2e-26
 Identities = 63/120 (52%), Positives = 81/120 (67%)

Query:    75 EVLQLWRTADAVCFDVDSTVCVDEGIDELAEFCGAGKAVAEWTARAMGGSVPFEEALAAR 134
             E+ +L+ +ADAVCFDVDSTV  +EGIDELA+ CG   AV+E T RAMGG+VPF+ AL  R
Sbjct:     6 ELRKLFYSADAVCFDVDSTVIREEGIDELAKICGVEDAVSEMTRRAMGGAVPFKAALTER 65

Query:   135 LSLFKPSLSQVQDFLEKRPPRLSPGIDEXXXXXXXXXXXXYLISGGFR----HMINILNI 190
             L+L +PS  QVQ  + ++PP L+PGI E            +LISGGFR    H+ + LNI
Sbjct:    66 LALIQPSREQVQRLIAEQPPHLTPGIRELVSRLQERNVQVFLISGGFRSIVEHVASKLNI 125

GO:0004647 "phosphoserine phosphatase activity" evidence=IEA

GO:0006564 "L-serine biosynthetic process" evidence=IEA

GO:0009612 "response to mechanical stimulus" evidence=IEA

GO:0031667 "response to nutrient levels" evidence=IEA

GO:0033574 "response to testosterone stimulus" evidence=IEA

GO:0043005 "neuron projection" evidence=IEA

UNIPROTKB|P78330 PSPH "Phosphoserine phosphatase" [Homo sapiens (taxid:9606)]

 Score = 294 (108.6 bits), Expect = 5.2e-26, P = 5.2e-26
 Identities = 63/120 (52%), Positives = 81/120 (67%)

Query:    75 EVLQLWRTADAVCFDVDSTVCVDEGIDELAEFCGAGKAVAEWTARAMGGSVPFEEALAAR 134
             E+ +L+ +ADAVCFDVDSTV  +EGIDELA+ CG   AV+E T RAMGG+VPF+ AL  R
Sbjct:     6 ELRKLFYSADAVCFDVDSTVIREEGIDELAKICGVEDAVSEMTRRAMGGAVPFKAALTER 65

Query:   135 LSLFKPSLSQVQDFLEKRPPRLSPGIDEXXXXXXXXXXXXYLISGGFR----HMINILNI 190
             L+L +PS  QVQ  + ++PP L+PGI E            +LISGGFR    H+ + LNI
Sbjct:    66 LALIQPSREQVQRLIAEQPPHLTPGIRELVSRLQERNVQVFLISGGFRSIVEHVASKLNI 125

GO:0009612 "response to mechanical stimulus" evidence=IEA

GO:0031667 "response to nutrient levels" evidence=IEA

GO:0033574 "response to testosterone stimulus" evidence=IEA

GO:0043005 "neuron projection" evidence=IEA

GO:0005737 "cytoplasm" evidence=IBA

GO:0006564 "L-serine biosynthetic process" evidence=IBA;TAS

GO:0004647 "phosphoserine phosphatase activity" evidence=IDA;TAS

GO:0006563 "L-serine metabolic process" evidence=IDA

GO:0000287 "magnesium ion binding" evidence=IDA

GO:0005509 "calcium ion binding" evidence=IDA

GO:0042803 "protein homodimerization activity" evidence=IPI

GO:0005829 "cytosol" evidence=TAS

GO:0008652 "cellular amino acid biosynthetic process" evidence=TAS

GO:0034641 "cellular nitrogen compound metabolic process" evidence=TAS

GO:0044281 "small molecule metabolic process" evidence=TAS

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
O82796	SERB_ARATH	3, ., 1, ., 3, ., 3	0.6827	0.9162	0.6305	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	3.1.3	0.921
3rd Layer	3.1.3.3	0.914

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input:
	GSVIVG00016203001	SubName- Full=Chromosome chr17 scaffold_12, whole genome shotgun sequence; (294 aa)
		(Vitis vinifera)
Predicted Functional Partners:
	GSVIVG00011750001	SubName- Full=Chromosome undetermined scaffold_334, whole genome shotgun sequence (Chromosome u [...] (330 aa)	•			•		•	•		0.969
	GSVIVG00032161001	RecName- Full=Serine hydroxymethyltransferase; EC=2.1.2.1;; Interconversion of serine and glyci [...] (428 aa)	•					•	•		0.950
	GSVIVG00015058001	RecName- Full=Serine hydroxymethyltransferase; EC=2.1.2.1;; Interconversion of serine and glyci [...] (516 aa)	•					•	•		0.939
	GSVIVG00026455001	RecName- Full=Serine hydroxymethyltransferase; EC=2.1.2.1;; Interconversion of serine and glyci [...] (563 aa)	•					•	•		0.922
	GSVIVG00015300001	SubName- Full=Chromosome chr18 scaffold_1, whole genome shotgun sequence; (570 aa)	•					•	•		0.921
	GSVIVG00022240001	SubName- Full=Chromosome chr6 scaffold_25, whole genome shotgun sequence; (401 aa)	•					•	•		0.919
	GSVIVG00023836001	SubName- Full=Chromosome chr7 scaffold_31, whole genome shotgun sequence; (316 aa)						•	•		0.912
	GSVIVG00000395001	SubName- Full=Chromosome chr2 scaffold_105, whole genome shotgun sequence; (333 aa)						•	•		0.906
	GSVIVG00000550001	SubName- Full=Chromosome chr8 scaffold_106, whole genome shotgun sequence; (476 aa)						•	•		0.900
	GSVIVG00027369001	SubName- Full=Chromosome chr19 scaffold_4, whole genome shotgun sequence; (458 aa)						•	•		0.900

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	203
PLN02954	224	PLN02954, PLN02954, phosphoserine phosphatase	1e-81
TIGR00338	219	TIGR00338, serB, phosphoserine phosphatase SerB	2e-30
COG0560	212	COG0560, SerB, Phosphoserine phosphatase [Amino ac	5e-19
PRK11133	322	PRK11133, serB, phosphoserine phosphatase; Provisi	1e-15
TIGR01488	177	TIGR01488, HAD-SF-IB, Haloacid Dehalogenase superf	9e-14
pfam00702	187	pfam00702, Hydrolase, haloacid dehalogenase-like h	6e-07
COG4359	220	COG4359, COG4359, Uncharacterized conserved protei	1e-05
pfam13419	176	pfam13419, HAD_2, Haloacid dehalogenase-like hydro	3e-04
TIGR01489	188	TIGR01489, DKMTPPase-SF, 2,3-diketo-5-methylthio-1	0.003

>gnl|CDD|215514 PLN02954, PLN02954, phosphoserine phosphatase

 Score =  241 bits (617), Expect = 1e-81
 Identities = 99/115 (86%), Positives = 109/115 (94%)

Query: 72  PSKEVLQLWRTADAVCFDVDSTVCVDEGIDELAEFCGAGKAVAEWTARAMGGSVPFEEAL 131
           PSK+VL+LWR+ADAVCFDVDSTVCVDEGIDELAEFCGAG+AVAEWTA+AMGGSVPFEEAL
Sbjct: 1   PSKDVLELWRSADAVCFDVDSTVCVDEGIDELAEFCGAGEAVAEWTAKAMGGSVPFEEAL 60

Query: 132 AARLSLFKPSLSQVQDFLEKRPPRLSPGIDELVKKLKANNKNVYLISGGFRHMIN 186
           AARLSLFKPSLSQV++FLEKRPPRLSPGI ELVKKL+A   +VYL+SGGFR MI 
Sbjct: 61  AARLSLFKPSLSQVEEFLEKRPPRLSPGIPELVKKLRARGTDVYLVSGGFRQMIA 115

Length = 224

>gnl|CDD|232927 TIGR00338, serB, phosphoserine phosphatase SerB

 Score =  110 bits (277), Expect = 2e-30
 Identities = 40/106 (37%), Positives = 59/106 (55%), Gaps = 1/106 (0%)

Query: 81  RTADAVCFDVDSTVCVDEGIDELAEFCGAGKAVAEWTARAMGGSVPFEEALAARLSLFKP 140
           R+   V FD+DST+   E IDE+A+  G  + V+E T RAM G + F+ +L  R++L K 
Sbjct: 12  RSKKLVVFDMDSTLINAETIDEIAKIAGVEEEVSEITERAMRGELDFKASLRERVALLKG 71

Query: 141 SLSQVQDFLEKRPPRLSPGIDELVKKLKANNKNVYLISGGFRHMIN 186
              ++   + +  P L+ G +ELVK LK     V +ISGGF     
Sbjct: 72  LPVELLKEVRENLP-LTEGAEELVKTLKEKGYKVAVISGGFDLFAE 116

Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins [Amino acid biosynthesis, Serine family]. Length = 219

>gnl|CDD|223634 COG0560, SerB, Phosphoserine phosphatase [Amino acid transport and metabolism]

 Score = 80.8 bits (200), Expect = 5e-19
 Identities = 45/116 (38%), Positives = 62/116 (53%), Gaps = 3/116 (2%)

Query: 81  RTADAVCFDVDSTVCVDEGIDELAEFCGAGKAVAEWTARAMGGSVPFEEALAARLSLFKP 140
           R      FD+D T+   E IDELA   G G+ V   T RAM G + FEE+L  R++L K 
Sbjct: 3   RMKKLAVFDLDGTLINAELIDELARGAGVGEEVLAITERAMRGELDFEESLRLRVALLKG 62

Query: 141 -SLSQVQDFLEKRPPRLSPGIDELVKKLKANNKNVYLISGGFRHMIN-ILNILKWD 194
             +  +++  E+    L+PG +ELV  LKA    V +ISGGF  ++  I   L  D
Sbjct: 63  LPVEVLEEVREEFLR-LTPGAEELVAALKAAGAKVVIISGGFTFLVEPIAERLGID 117

Length = 212

>gnl|CDD|182988 PRK11133, serB, phosphoserine phosphatase; Provisional

 Score = 73.4 bits (181), Expect = 1e-15
 Identities = 45/105 (42%), Positives = 60/105 (57%), Gaps = 9/105 (8%)

Query: 81  RTADAVCFDVDSTVCVDEGIDELAEFCGAGKAVAEWTARAMGGSVPFEEALAARLSLFKP 140
           RT   +  D+DST    E IDE+A+  G G+ VAE T RAM G + FE +L  R++  K 
Sbjct: 108 RTPGLLVMDMDSTAIQIECIDEIAKLAGTGEEVAEVTERAMRGELDFEASLRQRVATLKG 167

Query: 141 S----LSQVQDFLEKRPPRLSPGIDELVKKLKANNKNVYLISGGF 181
           +    L QV++ L   P  L PG+ ELV KL+A    V + SGGF
Sbjct: 168 ADANILQQVRENL---P--LMPGLTELVLKLQALGWKVAIASGGF 207

Length = 322

>gnl|CDD|233435 TIGR01488, HAD-SF-IB, Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like

 Score = 65.8 bits (161), Expect = 9e-14
 Identities = 38/113 (33%), Positives = 54/113 (47%), Gaps = 8/113 (7%)

Query: 85  AVCFDVDSTVCVDEG-IDELAEFCGAGKAVAEWTARAMGGSVPFEEALAARLSLFKPSLS 143
              FD D T+   +  ID LA+  G    V E T  A  G + FE+AL  RL+L   S S
Sbjct: 1   LAIFDFDGTLTRQDSLIDLLAKLLGTNDEVIELTRLAPSGRISFEDALGRRLALLHRSRS 60

Query: 144 Q--VQDFLEKRPPRLSPGIDELVKKLKANNKNVYLISGGF----RHMINILNI 190
           +   ++FL ++   L PG  EL+  LK    +  ++SGGF      +   L I
Sbjct: 61  EEVAKEFLARQVA-LRPGARELISWLKERGIDTVIVSGGFDFFVEPVAEKLGI 112

This model represents a subfamily of the Haloacid Dehalogenase superfamily of aspartate-nucleophile hydrolases. Subfamily IA, B, C and D are distinguished from the rest of the superfamily by the presence of a variable domain between the first and second conserved catalytic motifs. In subfamilies IA and IB, this domain consists of an alpha-helical bundle. It was necessary to model these two subfamilies separately, breaking them at a an apparent phylogenetic bifurcation, so that the resulting model(s) are not so broadly defined that members of subfamily III (which lack the variable domain) are included. Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences [Unknown function, Enzymes of unknown specificity]. Length = 177

>gnl|CDD|216069 pfam00702, Hydrolase, haloacid dehalogenase-like hydrolase

 Score = 47.7 bits (113), Expect = 6e-07
 Identities = 32/125 (25%), Positives = 44/125 (35%), Gaps = 23/125 (18%)

Query: 84  DAVCFDVDST-------VCVDEGIDELAE---------------FCGAGKAVAEWTARAM 121
            AV FD+D T       V   E + E A                  G  + V     RA+
Sbjct: 2   KAVVFDLDGTLTDGEPVVPEAEALLEAAAALGVAIVIAAGENLTKEGREELVRRLLLRAL 61

Query: 122 GGSVPFEEALAARLSLFKPSLSQVQDFLEKRPPRLSPGIDELVKKLKANNKNVYLISGGF 181
            G    EE L A  ++    L  V   L      L PG  E +K+LK     + +++G  
Sbjct: 62  AGEELLEELLRAGATVVA-VLDLVVLGLIALTDPLYPGAREALKELKEAGIKLAILTGDN 120

Query: 182 RHMIN 186
           R   N
Sbjct: 121 RLTAN 125

This family is structurally different from the alpha/beta hydrolase family (pfam00561). This family includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure of the family consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of Pseudomonas sp. (S)-2-haloacid dehalogenase 1. The rest of the fold is composed of the core alpha/beta domain. Those members with the characteristic DxD triad at the N-terminus are probably phosphatidylglycerolphosphate (PGP) phosphatases involved in cardiolipin biosynthesis in the mitochondria. Length = 187

>gnl|CDD|226802 COG4359, COG4359, Uncharacterized conserved protein [Function unknown]

 Score = 43.6 bits (103), Expect = 1e-05
 Identities = 26/120 (21%), Positives = 51/120 (42%), Gaps = 10/120 (8%)

Query: 89  DVDSTVCVDEGIDELAEFCGAGKAVA---EWTARAMGGSVPFEEALAARLSLFKPSLSQV 145
           D D T+ +++  D + +  G G+  A         +  ++ F +           SL ++
Sbjct: 9   DFDGTITLNDSNDYITDTFGPGEWKALKDGV----LSKTISFRDGFGRMFGSIHSSLEEI 64

Query: 146 QDFLEKRPPRLSPGIDELVKKLKANNKNVYLISGGFRHMINIL--NILKWDVLKVIQITS 203
            +FL K   ++ PG  E V+ +K ++    ++S G    I  L   I+  + +  I I S
Sbjct: 65  LEFLLKDI-KIDPGFKEFVEWIKEHDIPFIVVSSGMDPFIYPLFEGIVGKERIYCIDIVS 123

Length = 220

>gnl|CDD|222115 pfam13419, HAD_2, Haloacid dehalogenase-like hydrolase

 Score = 39.6 bits (93), Expect = 3e-04
 Identities = 28/106 (26%), Positives = 48/106 (45%), Gaps = 9/106 (8%)

Query: 88  FDVDSTVC-VDEGI-DELAEFCGA--GKAVAEWTARAMGGSVPFEEALAARLSLFKPSLS 143
           FD+D T+   D  I + L +      G  ++    R  GG +PF+EALA  L        
Sbjct: 3   FDLDGTLIDFDPVIFEALRDLAAERLGLDISAEELREAGG-LPFDEALADLLREHPIDPD 61

Query: 144 QVQDFLEKRP----PRLSPGIDELVKKLKANNKNVYLISGGFRHMI 185
           ++ + L +          P + EL+++LKA    + ++S G R  +
Sbjct: 62  EILEALLEYNLESRLEPFPDVVELLRRLKAKGVKLVILSNGSREAV 107

Length = 176

>gnl|CDD|213629 TIGR01489, DKMTPPase-SF, 2,3-diketo-5-methylthio-1-phosphopentane phosphatase

 Score = 37.0 bits (86), Expect = 0.003
 Identities = 19/96 (19%), Positives = 39/96 (40%), Gaps = 3/96 (3%)

Query: 86  VCFDVDSTVCVDEGIDELAEFCGAGKAVAEW-TARAMGGSVPFEEALAARLSLFKPSLSQ 144
           V  D D T+ +++  D + +  G  +A        +   S+ F +     L        +
Sbjct: 4   VVSDFDGTITLNDSDDWITDKFGPPEANRLLDGVLSKTLSIKFMDRRMKGLLPSGLKEDE 63

Query: 145 VQDFLEKRPPRLSPGIDELVKKLKANNKNVYLISGG 180
           + + L+  P  + PG  E +  +K +  +  +IS G
Sbjct: 64  ILEVLKSAP--IDPGFKEFIAFIKEHGIDFIVISDG 97

This phosphatase is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. With the exception of OMNI|NTL01BS01361 from B. subtilis and GP|15024582 from Clostridium acetabutylicum, the members of this group are all eukaryotic, spanning metazoa, plants and fungi. The B. subtilus gene (YkrX, renamed MtnX) is part of an operon for the conversion of methylthioribose (MTR) to methionine. It works with the enolase MtnW, a RuBisCO homolog. The combination of MtnW and MtnX achieves the same overall reaction as the enolase-phosphatase MtnC. The function of MtnX was shown by Ashida, et al. (2003) to be 2,3-diketo-5-methylthio-1-phosphopentane phosphatase, rather than 2,3-diketo-5-methylthio-1-phosphopentane phosphatase as proposed earlier. See the Genome Property for methionine salvage for more details. In eukaryotes, methionine salvage from methylthioadenosine also occurs. It seems reasonable that members of this family in eukaryotes fulfill a similar role as in Bacillus. A more specific, equivalog-level model is TIGR03333. Note that a member of this family from S. cerevisiae is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact [Central intermediary metabolism, Other]. Length = 188

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	203
PLN02954	224	phosphoserine phosphatase	99.88
KOG1615	227	consensus Phosphoserine phosphatase [Amino acid tr	99.85
TIGR00338	219	serB phosphoserine phosphatase SerB. Phosphoserine	99.76
COG0560	212	SerB Phosphoserine phosphatase [Amino acid transpo	99.71
TIGR01491	201	HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPa	99.7
PRK11133	322	serB phosphoserine phosphatase; Provisional	99.67
PLN02770	248	haloacid dehalogenase-like hydrolase family protei	99.67
PRK09552	219	mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosp	99.65
PLN03243	260	haloacid dehalogenase-like hydrolase; Provisional	99.64
TIGR01488	177	HAD-SF-IB Haloacid Dehalogenase superfamily, subfa	99.64
COG0637	221	Predicted phosphatase/phosphohexomutase [General f	99.62
TIGR03351	220	PhnX-like phosphonatase-like hydrolase. This clade	99.62
PRK13288	214	pyrophosphatase PpaX; Provisional	99.6
PRK13226	229	phosphoglycolate phosphatase; Provisional	99.59
PLN02575	381	haloacid dehalogenase-like hydrolase	99.59
PRK13225	273	phosphoglycolate phosphatase; Provisional	99.58
TIGR01489	188	DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopent	99.58
COG0546	220	Gph Predicted phosphatases [General function predi	99.58
TIGR01449	213	PGP_bact 2-phosphoglycolate phosphatase, prokaryot	99.56
TIGR02009	185	PGMB-YQAB-SF beta-phosphoglucomutase family hydrol	99.55
PRK10826	222	2-deoxyglucose-6-phosphatase; Provisional	99.55
PRK11587	218	putative phosphatase; Provisional	99.55
TIGR03333	214	salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl	99.54
TIGR01422	253	phosphonatase phosphonoacetaldehyde hydrolase. Thi	99.53
PRK13222	226	phosphoglycolate phosphatase; Provisional	99.52
PRK13478	267	phosphonoacetaldehyde hydrolase; Provisional	99.51
TIGR02137	203	HSK-PSP phosphoserine phosphatase/homoserine phosp	99.51
PRK10725	188	fructose-1-P/6-phosphogluconate phosphatase; Provi	99.5
PRK13223	272	phosphoglycolate phosphatase; Provisional	99.5
PRK13582	205	thrH phosphoserine phosphatase; Provisional	99.5
PRK14988	224	GMP/IMP nucleotidase; Provisional	99.5
PRK06698	459	bifunctional 5'-methylthioadenosine/S-adenosylhomo	99.5
PRK10563	221	6-phosphogluconate phosphatase; Provisional	99.48
TIGR02253	221	CTE7 HAD superfamily (subfamily IA) hydrolase, TIG	99.47
TIGR01454	205	AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthes	99.47
TIGR01990	185	bPGM beta-phosphoglucomutase. The enzyme from L. l	99.47
TIGR01428	198	HAD_type_II 2-haloalkanoic acid dehalogenase, type	99.45
PLN02940	382	riboflavin kinase	99.45
PRK09449	224	dUMP phosphatase; Provisional	99.44
TIGR02252	203	DREG-2 REG-2-like, HAD superfamily (subfamily IA)	99.42
TIGR01548	197	HAD-SF-IA-hyp1 haloacid dehalogenase superfamily,	99.41
COG4359	220	Uncharacterized conserved protein [Function unknow	99.4
TIGR02254	224	YjjG/YfnB HAD superfamily (subfamily IA) hydrolase	99.38
PRK11590	211	hypothetical protein; Provisional	99.34
PF06888	234	Put_Phosphatase: Putative Phosphatase; InterPro: I	99.33
PF13419	176	HAD_2: Haloacid dehalogenase-like hydrolase; PDB:	99.31
PLN02919	1057	haloacid dehalogenase-like hydrolase family protei	99.3
TIGR02247	211	HAD-1A3-hyp Epoxide hydrolase N-terminal domain-li	99.29
PLN02779	286	haloacid dehalogenase-like hydrolase family protei	99.27
PRK09456	199	?-D-glucose-1-phosphatase; Provisional	99.27
TIGR01672	237	AphA HAD superfamily (subfamily IIIB) phosphatase,	99.26
TIGR01993	184	Pyr-5-nucltdase pyrimidine 5'-nucleotidase. These	99.25
TIGR01490	202	HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrol	99.24
TIGR01509	183	HAD-SF-IA-v3 haloacid dehalogenase superfamily, su	99.24
KOG2914	222	consensus Predicted haloacid-halidohydrolase and r	99.21
TIGR01493	175	HAD-SF-IA-v2 Haloacid dehalogenase superfamily, su	99.17
TIGR01549	154	HAD-SF-IA-v1 haloacid dehalogenase superfamily, su	99.16
PHA02597	197	30.2 hypothetical protein; Provisional	99.16
TIGR01545	210	YfhB_g-proteo haloacid dehalogenase superfamily, s	99.1
PRK10748	238	flavin mononucleotide phosphatase; Provisional	99.08
COG1011	229	Predicted hydrolase (HAD superfamily) [General fun	99.0
KOG3120	256	consensus Predicted haloacid dehalogenase-like hyd	98.92
PLN02811	220	hydrolase	98.91
PF12710	192	HAD: haloacid dehalogenase-like hydrolase; PDB: 3P	98.88
cd01427	139	HAD_like Haloacid dehalogenase-like hydrolases. Th	98.86
TIGR01684	301	viral_ppase viral phosphatase. These proteins also	98.81
PHA03398	303	viral phosphatase superfamily protein; Provisional	98.73
TIGR01681	128	HAD-SF-IIIC HAD-superfamily phosphatase, subfamily	98.68
TIGR01685	174	MDP-1 magnesium-dependent phosphatase-1. This mode	98.68
PRK08238	479	hypothetical protein; Validated	98.66
PRK11009	237	aphA acid phosphatase/phosphotransferase; Provisio	98.65
TIGR01662	132	HAD-SF-IIIA HAD-superfamily hydrolase, subfamily I	98.59
TIGR01544	277	HAD-SF-IE haloacid dehalogenase superfamily, subfa	98.55
TIGR01459	242	HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolas	98.49
TIGR01664	166	DNA-3'-Pase DNA 3'-phosphatase. The central phosph	98.42
TIGR01533	266	lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) famil	98.38
PLN02645	311	phosphoglycolate phosphatase	98.35
TIGR01656	147	Histidinol-ppas histidinol-phosphate phosphatase f	98.34
KOG3085	237	consensus Predicted hydrolase (HAD superfamily) [G	98.28
TIGR01691	220	enolase-ppase 2,3-diketo-5-methylthio-1-phosphopen	98.24
PRK08942	181	D,D-heptose 1,7-bisphosphate phosphatase; Validate	98.21
PF00702	215	Hydrolase: haloacid dehalogenase-like hydrolase; I	98.15
PRK00192	273	mannosyl-3-phosphoglycerate phosphatase; Reviewed	98.01
PRK01158	230	phosphoglycolate phosphatase; Provisional	97.95
KOG3109	244	consensus Haloacid dehalogenase-like hydrolase [Ge	97.92
TIGR01675	229	plant-AP plant acid phosphatase. This model explic	97.89
PF06941	191	NT5C: 5' nucleotidase, deoxy (Pyrimidine), cytosol	97.86
TIGR01487	215	SPP-like sucrose-phosphate phosphatase-like hydrol	97.86
PF12689	169	Acid_PPase: Acid Phosphatase; InterPro: IPR010036	97.82
smart00775	157	LNS2 LNS2 domain. This domain is found in Saccharo	97.81
PRK15126	272	thiamin pyrimidine pyrophosphate hydrolase; Provis	97.79
TIGR01663	526	PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase	97.78
PRK10976	266	putative hydrolase; Provisional	97.77
PRK10444	248	UMP phosphatase; Provisional	97.73
COG0647	269	NagD Predicted sugar phosphatases of the HAD super	97.71
PRK10530	272	pyridoxal phosphate (PLP) phosphatase; Provisional	97.7
TIGR01452	279	PGP_euk phosphoglycolate/pyridoxal phosphate phosp	97.69
COG0561	264	Cof Predicted hydrolases of the HAD superfamily [G	97.68
PRK10513	270	sugar phosphate phosphatase; Provisional	97.67
smart00577	148	CPDc catalytic domain of ctd-like phosphatases.	97.61
PRK12702	302	mannosyl-3-phosphoglycerate phosphatase; Reviewed	97.6
PHA02530	300	pseT polynucleotide kinase; Provisional	97.58
PRK05446	354	imidazole glycerol-phosphate dehydratase/histidino	97.58
TIGR02244	343	HAD-IG-Ncltidse HAD superfamily (subfamily IG) hyd	97.55
PRK09484	183	3-deoxy-D-manno-octulosonate 8-phosphate phosphata	97.53
PRK03669	271	mannosyl-3-phosphoglycerate phosphatase; Reviewed	97.52
TIGR01680	275	Veg_Stor_Prot vegetative storage protein. The prot	97.42
TIGR01261	161	hisB_Nterm histidinol-phosphatase. This model desc	97.41
PF03767	229	Acid_phosphat_B: HAD superfamily, subfamily IIIB (	97.3
PTZ00174	247	phosphomannomutase; Provisional	97.27
PLN02177	497	glycerol-3-phosphate acyltransferase	97.19
COG4996	164	Predicted phosphatase [General function prediction	97.15
TIGR01689	126	EcbF-BcbF capsule biosynthesis phosphatase. Due to	97.11
PF13344	101	Hydrolase_6: Haloacid dehalogenase-like hydrolase;	97.1
TIGR00213	176	GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase	97.1
PLN02887	580	hydrolase family protein	97.09
PRK06769	173	hypothetical protein; Validated	96.97
TIGR01456	321	CECR5 HAD-superfamily class IIA hydrolase, TIGR014	96.92
TIGR01484	204	HAD-SF-IIB HAD-superfamily hydrolase, subfamily II	96.88
PRK14502	694	bifunctional mannosyl-3-phosphoglycerate synthase/	96.69
PF05152	297	DUF705: Protein of unknown function (DUF705); Inte	96.62
TIGR02250	156	FCP1_euk FCP1-like phosphatase, phosphatase domain	96.59
TIGR01668	170	YqeG_hyp_ppase HAD superfamily (subfamily IIIA) ph	96.57
PRK10187	266	trehalose-6-phosphate phosphatase; Provisional	96.47
TIGR01686	320	FkbH FkbH-like domain. The C-terminal portion of t	96.44
PLN02499	498	glycerol-3-phosphate acyltransferase	96.37
TIGR01525	556	ATPase-IB_hvy heavy metal translocating P-type ATP	96.12
TIGR02251	162	HIF-SF_euk Dullard-like phosphatase domain. This d	95.89
TIGR01512	536	ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translo	95.85
TIGR01670	154	YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-pho	95.75
COG2503	274	Predicted secreted acid phosphatase [General funct	95.71
PF08235	157	LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209	95.36
TIGR01457	249	HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydr	95.28
PRK14501	726	putative bifunctional trehalose-6-phosphate syntha	95.23
COG4229	229	Predicted enolase-phosphatase [Energy production a	95.13
TIGR01511	562	ATPase-IB1_Cu copper-(or silver)-translocating P-t	95.12
TIGR01458	257	HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydr	95.12
TIGR02245	195	HAD_IIID1 HAD-superfamily subfamily IIID hydrolase	95.02
PLN02423	245	phosphomannomutase	94.27
PLN02205	854	alpha,alpha-trehalose-phosphate synthase [UDP-form	94.18
TIGR02726	169	phenyl_P_delta phenylphosphate carboxylase, delta	94.17
TIGR02726	169	phenyl_P_delta phenylphosphate carboxylase, delta	94.11
PF05761	448	5_nucleotid: 5' nucleotidase family; InterPro: IPR	93.85
TIGR02463	221	MPGP_rel mannosyl-3-phosphoglycerate phosphatase-r	93.59
TIGR01670	154	YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-pho	93.51
PF05822	246	UMPH-1: Pyrimidine 5'-nucleotidase (UMPH-1); Inter	93.22
TIGR02461	225	osmo_MPG_phos mannosyl-3-phosphoglycerate phosphat	93.08
PRK10671	834	copA copper exporting ATPase; Provisional	92.83
COG1778	170	Low specificity phosphatase (HAD superfamily) [Gen	92.75
TIGR01522	884	ATPase-IIA2_Ca golgi membrane calcium-translocatin	92.63
TIGR00099	256	Cof-subfamily Cof subfamily of IIB subfamily of ha	92.35
TIGR01497	675	kdpB K+-transporting ATPase, B subunit. One sequen	92.33
TIGR01482	225	SPP-subfamily Sucrose-phosphate phosphatase subfam	92.08
TIGR01482	225	SPP-subfamily Sucrose-phosphate phosphatase subfam	92.07
PRK01122	679	potassium-transporting ATPase subunit B; Provision	92.05
PRK11033	741	zntA zinc/cadmium/mercury/lead-transporting ATPase	91.94
COG4030	315	Uncharacterized protein conserved in archaea [Func	91.93
PTZ00445	219	p36-lilke protein; Provisional	91.73
PF11019	252	DUF2608: Protein of unknown function (DUF2608); In	91.63
PLN03064	934	alpha,alpha-trehalose-phosphate synthase (UDP-form	91.58
PF08282	254	Hydrolase_3: haloacid dehalogenase-like hydrolase;	91.5
PRK14010	673	potassium-transporting ATPase subunit B; Provision	91.39
TIGR01486	256	HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosph	91.21
COG2179	175	Predicted hydrolase of the HAD superfamily [Genera	91.14
PF08282	254	Hydrolase_3: haloacid dehalogenase-like hydrolase;	90.94
PF08645	159	PNK3P: Polynucleotide kinase 3 phosphatase; InterP	90.39
TIGR00099	256	Cof-subfamily Cof subfamily of IIB subfamily of ha	89.98
COG2217	713	ZntA Cation transport ATPase [Inorganic ion transp	89.9
KOG2470	510	consensus Similar to IMP-GMP specific 5'-nucleotid	89.65
TIGR01457	249	HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydr	89.63
TIGR02463	221	MPGP_rel mannosyl-3-phosphoglycerate phosphatase-r	89.47
TIGR02461	225	osmo_MPG_phos mannosyl-3-phosphoglycerate phosphat	89.3
PF13344	101	Hydrolase_6: Haloacid dehalogenase-like hydrolase;	88.88
TIGR01460	236	HAD-SF-IIA Haloacid Dehalogenase Superfamily Class	88.8
TIGR01458	257	HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydr	88.6
TIGR01647	755	ATPase-IIIA_H plasma-membrane proton-efflux P-type	87.94
TIGR01486	256	HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosph	87.53
PF03031	159	NIF: NLI interacting factor-like phosphatase; Inte	87.51
PF08645	159	PNK3P: Polynucleotide kinase 3 phosphatase; InterP	86.96
KOG3128	298	consensus Uncharacterized conserved protein [Funct	86.78
TIGR01460	236	HAD-SF-IIA Haloacid Dehalogenase Superfamily Class	86.68
COG2216	681	KdpB High-affinity K+ transport system, ATPase cha	86.48
COG5083	580	SMP2 Uncharacterized protein involved in plasmid m	86.31
TIGR01116	917	ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium	85.82
TIGR00685	244	T6PP trehalose-phosphatase. At least 18 distinct s	85.39
PF03031	159	NIF: NLI interacting factor-like phosphatase; Inte	85.28
TIGR02471	236	sucr_syn_bact_C sucrose phosphate synthase, sucros	85.25
TIGR01517	941	ATPase-IIB_Ca plasma-membrane calcium-translocatin	84.22
TIGR01524	867	ATPase-IIIB_Mg magnesium-translocating P-type ATPa	83.95
COG0731	296	Fe-S oxidoreductases [Energy production and conver	83.76
PRK10517	902	magnesium-transporting ATPase MgtA; Provisional	83.34
TIGR01485	249	SPP_plant-cyano sucrose-6F-phosphate phosphohydrol	83.33
PRK15122	903	magnesium-transporting ATPase; Provisional	83.07
TIGR01523	1053	ATPase-IID_K-Na potassium and/or sodium efflux P-t	82.9
TIGR00213	176	GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase	82.24
PF09419	168	PGP_phosphatase: Mitochondrial PGP phosphatase; In	82.09
COG0474	917	MgtA Cation transport ATPase [Inorganic ion transp	82.0
COG3769	274	Predicted hydrolase (HAD superfamily) [General fun	81.78
KOG2882	306	consensus p-Nitrophenyl phosphatase [Inorganic ion	81.5
COG5663	194	Uncharacterized conserved protein [Function unknow	80.63
COG0241	181	HisB Histidinol phosphatase and related phosphatas	80.57
TIGR01106	997	ATPase-IIC_X-K sodium or proton efflux -- potassiu	80.51
TIGR01657	1054	P-ATPase-V P-type ATPase of unknown pump specifici	80.46
PLN03017	366	trehalose-phosphatase	80.33
PRK06769	173	hypothetical protein; Validated	80.17

>PLN02954 phosphoserine phosphatase

Probab=99.88  E-value=1.2e-21  Score=162.35  Aligned_cols=123  Identities=82%  Similarity=1.315  Sum_probs=110.3

Q ss_pred             ChHHHHhhccCCcEEEEECCCcccccchHHHHHHHcCCCccHHHHHHHHhCCCCCHHHHHHHHHhccCCCHHHHHHHHHh
Q 028799           72 PSKEVLQLWRTADAVCFDVDSTVCVDEGIDELAEFCGAGKAVAEWTARAMGGSVPFEEALAARLSLFKPSLSQVQDFLEK  151 (203)
Q Consensus        72 ~~~~~~~~~~~~kaVIFD~DGTLiDse~~~~la~~~G~~~~~~~~~~~~~gG~~~~~e~l~~~~~~~~~~~e~l~~~~~~  151 (203)
                      |||.++++|.++++|+|||||||+|++.+..+++.+|......++..++++|.+++.+.+..+++.+....+.+.++++.
T Consensus         1 ~~~~~~~~~~~~k~viFDfDGTL~~~~~~~~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (224)
T PLN02954          1 PSKDVLELWRSADAVCFDVDSTVCVDEGIDELAEFCGAGEAVAEWTAKAMGGSVPFEEALAARLSLFKPSLSQVEEFLEK   80 (224)
T ss_pred             ChHHHHHHHccCCEEEEeCCCcccchHHHHHHHHHcCChHHHHHHHHHHHCCCCCHHHHHHHHHHHcCCCHHHHHHHHHH
Confidence            68999999999999999999999999999999999998766677888899999999999888887765566677777776


Q ss_pred             CCCCCCCcHHHHHHHHHHCCCeEEEEcCCCHHHHHHHH-HcCCC
Q 028799          152 RPPRLSPGIDELVKKLKANNKNVYLISGGFRHMINILN-ILKWD  194 (203)
Q Consensus       152 ~~~~l~PG~~elL~~Lk~~G~~vaIVTn~~~~~i~~ll-~lGL~  194 (203)
                      ...+++||+.++|+.|+++|++++|+||+++..++.++ .+|++
T Consensus        81 ~~~~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~~l~~~gi~  124 (224)
T PLN02954         81 RPPRLSPGIPELVKKLRARGTDVYLVSGGFRQMIAPVAAILGIP  124 (224)
T ss_pred             ccCCCCccHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHhCCC
Confidence            55679999999999999999999999999999999999 99997

>KOG1615 consensus Phosphoserine phosphatase [Amino acid transport and metabolism]

Probab=99.85  E-value=1.3e-20  Score=153.88  Aligned_cols=122  Identities=58%  Similarity=0.927  Sum_probs=116.1

Q ss_pred             HHHHhhccCCcEEEEECCCcccccchHHHHHHHcCCCccHHHHHHHHhCCCCCHHHHHHHHHhccCCCHHHHHHHHHhCC
Q 028799           74 KEVLQLWRTADAVCFDVDSTVCVDEGIDELAEFCGAGKAVAEWTARAMGGSVPFEEALAARLSLFKPSLSQVQDFLEKRP  153 (203)
Q Consensus        74 ~~~~~~~~~~kaVIFD~DGTLiDse~~~~la~~~G~~~~~~~~~~~~~gG~~~~~e~l~~~~~~~~~~~e~l~~~~~~~~  153 (203)
                      +|..++|+..++||||||.|++..|.++++++++|....+.+++.+.|+|.++|.+++++|+..++++..+++++..+.+
T Consensus         7 ~e~~~~~~~~~aVcFDvDSTvi~eEgIdelA~~~G~~~~Va~~T~rAMng~~~F~eaL~~Rl~llqp~~~qv~~~v~~~k   86 (227)
T KOG1615|consen    7 SELAKLWRSADAVCFDVDSTVIQEEGIDELAAYCGVGEAVAEVTRRAMNGEADFQEALAARLSLLQPLQVQVEQFVIKQK   86 (227)
T ss_pred             HHHHHHHHhcCeEEEecCcchhHHhhHHHHHHHhCchHHHHHHHHHHhCCCCcHHHHHHHHHHHhcccHHHHHHHHhcCC
Confidence            57899999999999999999999999999999999999999999999999999999999999999888888888887767


Q ss_pred             CCCCCcHHHHHHHHHHCCCeEEEEcCCCHHHHHHHH-HcCCCc
Q 028799          154 PRLSPGIDELVKKLKANNKNVYLISGGFRHMINILN-ILKWDV  195 (203)
Q Consensus       154 ~~l~PG~~elL~~Lk~~G~~vaIVTn~~~~~i~~ll-~lGL~~  195 (203)
                      +.+.||++|++..|+++|.+++++|+|++.+++++. .+||+.
T Consensus        87 ~~lT~Gi~eLv~~L~~~~~~v~liSGGF~~~i~~Va~~Lgi~~  129 (227)
T KOG1615|consen   87 PTLTPGIRELVSRLHARGTQVYLISGGFRQLIEPVAEQLGIPK  129 (227)
T ss_pred             CccCCCHHHHHHHHHHcCCeEEEEcCChHHHHHHHHHHhCCcH
Confidence            899999999999999999999999999999999999 999986

>TIGR00338 serB phosphoserine phosphatase SerB

Probab=99.76  E-value=1.8e-17  Score=136.96  Aligned_cols=121  Identities=36%  Similarity=0.518  Sum_probs=100.6

Q ss_pred             HHhhccCCcEEEEECCCcccccchHHHHHHHcCCCccHHHHHHHHhCCCCCHHHHHHHHHhccCC-CHHHHHHHHHhCCC
Q 028799           76 VLQLWRTADAVCFDVDSTVCVDEGIDELAEFCGAGKAVAEWTARAMGGSVPFEEALAARLSLFKP-SLSQVQDFLEKRPP  154 (203)
Q Consensus        76 ~~~~~~~~kaVIFD~DGTLiDse~~~~la~~~G~~~~~~~~~~~~~gG~~~~~e~l~~~~~~~~~-~~e~l~~~~~~~~~  154 (203)
                      +.++..++++++|||||||+|++.+..+++.+|.+....++..+++.|..++.+.+..++..+.+ ..+.+.++.+.  .
T Consensus         7 ~~~~~~~~k~iiFD~DGTL~~~~~~~~l~~~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~   84 (219)
T TIGR00338         7 LSPLLRSKKLVVFDMDSTLINAETIDEIAKIAGVEEEVSEITERAMRGELDFKASLRERVALLKGLPVELLKEVREN--L   84 (219)
T ss_pred             chhhhccCCEEEEeCcccCCCchHHHHHHHHhCCHHHHHHHHHHHHcCCCCHHHHHHHHHHHhCCCCHHHHHHHHhc--C
Confidence            45668889999999999999999999999999986555566677788888888888777766544 45555555544  5


Q ss_pred             CCCCcHHHHHHHHHHCCCeEEEEcCCCHHHHHHHH-HcCCCccce
Q 028799          155 RLSPGIDELVKKLKANNKNVYLISGGFRHMINILN-ILKWDVLKV  198 (203)
Q Consensus       155 ~l~PG~~elL~~Lk~~G~~vaIVTn~~~~~i~~ll-~lGL~~~~~  198 (203)
                      +++||+.++|+.|+++|++++|+||++...++.++ .+|++.++.
T Consensus        85 ~~~~g~~~~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~~i~~~~~  129 (219)
T TIGR00338        85 PLTEGAEELVKTLKEKGYKVAVISGGFDLFAEHVKDKLGLDAAFA  129 (219)
T ss_pred             CcCCCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCCceEe
Confidence            79999999999999999999999999999999999 999987664

Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins.

>COG0560 SerB Phosphoserine phosphatase [Amino acid transport and metabolism]

Probab=99.71  E-value=1.7e-16  Score=132.63  Aligned_cols=121  Identities=37%  Similarity=0.540  Sum_probs=109.1

Q ss_pred             ccCCcEEEEECCCcccccchHHHHHHHcCCCccHHHHHHHHhCCCCCHHHHHHHHHhccCC-CHHHHHHHHHhCCCCCCC
Q 028799           80 WRTADAVCFDVDSTVCVDEGIDELAEFCGAGKAVAEWTARAMGGSVPFEEALAARLSLFKP-SLSQVQDFLEKRPPRLSP  158 (203)
Q Consensus        80 ~~~~kaVIFD~DGTLiDse~~~~la~~~G~~~~~~~~~~~~~gG~~~~~e~l~~~~~~~~~-~~e~l~~~~~~~~~~l~P  158 (203)
                      .++.++++|||||||++.+.++.++...|.......++.+.+.|.+++.+.+..++..+++ +.+.++++.++. .+++|
T Consensus         2 ~~~~~L~vFD~D~TLi~~~~~~~~~~~~g~~~~v~~~t~~~~~~~~~~~~~~~~~v~~l~g~~~~~v~~~~~~~-~~l~~   80 (212)
T COG0560           2 RRMKKLAVFDLDGTLINAELIDELARGAGVGEEVLAITERAMRGELDFEESLRLRVALLKGLPVEVLEEVREEF-LRLTP   80 (212)
T ss_pred             CCccceEEEecccchhhHHHHHHHHHHhCCHHHHHHHHHHHhcccccHHHHHHHHHHHhCCCCHHHHHHHHHhc-CcCCc
Confidence            3567899999999999988999999999998888889999999999999999999998888 777888888774 68999


Q ss_pred             cHHHHHHHHHHCCCeEEEEcCCCHHHHHHHH-HcCCCccceEEe
Q 028799          159 GIDELVKKLKANNKNVYLISGGFRHMINILN-ILKWDVLKVIQI  201 (203)
Q Consensus       159 G~~elL~~Lk~~G~~vaIVTn~~~~~i~~ll-~lGL~~~~~i~i  201 (203)
                      |+.+++++|+++|++++|+|+|+...++++. .+|++.......
T Consensus        81 ga~elv~~lk~~G~~v~iiSgg~~~lv~~ia~~lg~d~~~an~l  124 (212)
T COG0560          81 GAEELVAALKAAGAKVVIISGGFTFLVEPIAERLGIDYVVANEL  124 (212)
T ss_pred             cHHHHHHHHHHCCCEEEEEcCChHHHHHHHHHHhCCchheeeEE
Confidence            9999999999999999999999999999999 999998766543

>TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal

Probab=99.70  E-value=5.3e-16  Score=125.68  Aligned_cols=119  Identities=20%  Similarity=0.234  Sum_probs=89.3

Q ss_pred             cCCcEEEEECCCcccccch-HHHHHHHcCCCccHHHHHHHHhCCCCCHHHHHHHHHhccCC-----CHHHHHHHHHhCCC
Q 028799           81 RTADAVCFDVDSTVCVDEG-IDELAEFCGAGKAVAEWTARAMGGSVPFEEALAARLSLFKP-----SLSQVQDFLEKRPP  154 (203)
Q Consensus        81 ~~~kaVIFD~DGTLiDse~-~~~la~~~G~~~~~~~~~~~~~gG~~~~~e~l~~~~~~~~~-----~~e~l~~~~~~~~~  154 (203)
                      +|+++|+|||||||+|++. +..+...+|...........+..|..++.+.+......+.+     ..+++.+++++  .
T Consensus         2 ~~~k~viFD~DGTLid~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~   79 (201)
T TIGR01491         2 RMIKLIIFDLDGTLTDVMSSWEYLHRRLETCGLAKKNAELFFSGRISYEEWARLDASLWKRRSGRLRREEVEEIFKE--I   79 (201)
T ss_pred             CcceEEEEeCCCCCcCCccHHHHHHHHhCchHHHHHHHHHHHcCCCCHHHHHHHHHHHHhhcccCCCHHHHHHHHHh--C
Confidence            4789999999999999765 56666678865333333345666888888776544333211     34456666654  5


Q ss_pred             CCCCcHHHHHHHHHHCCCeEEEEcCCCHHHHHHHH-HcCCCccceEEe
Q 028799          155 RLSPGIDELVKKLKANNKNVYLISGGFRHMINILN-ILKWDVLKVIQI  201 (203)
Q Consensus       155 ~l~PG~~elL~~Lk~~G~~vaIVTn~~~~~i~~ll-~lGL~~~~~i~i  201 (203)
                      +++||+.++|+.|+++|++++|+||++...+++++ .+|+..++...+
T Consensus        80 ~~~~g~~e~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~g~~~~~~~~~  127 (201)
T TIGR01491        80 SLRDYAEELVRWLKEKGLKTAIVSGGIMCLAKKVAEKLNPDYVYSNEL  127 (201)
T ss_pred             CCCccHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHhCCCeEEEEEE
Confidence            89999999999999999999999999999999999 999987655433

This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog.

>PRK11133 serB phosphoserine phosphatase; Provisional

Probab=99.67  E-value=6.6e-16  Score=136.46  Aligned_cols=116  Identities=39%  Similarity=0.516  Sum_probs=100.4

Q ss_pred             ccCCcEEEEECCCcccccchHHHHHHHcCCCccHHHHHHHHhCCCCCHHHHHHHHHhccCCCH-HHHHHHHHhCCCCCCC
Q 028799           80 WRTADAVCFDVDSTVCVDEGIDELAEFCGAGKAVAEWTARAMGGSVPFEEALAARLSLFKPSL-SQVQDFLEKRPPRLSP  158 (203)
Q Consensus        80 ~~~~kaVIFD~DGTLiDse~~~~la~~~G~~~~~~~~~~~~~gG~~~~~e~l~~~~~~~~~~~-e~l~~~~~~~~~~l~P  158 (203)
                      ++++++++|||||||+..+.++++++.+|.+.....++.+++.|.+++.+.+.+++..+++.. +.++.+.+.  .+++|
T Consensus       107 ~~~~~LvvfDmDGTLI~~e~i~eia~~~g~~~~v~~it~~~m~Geldf~esl~~rv~~l~g~~~~il~~v~~~--l~l~p  184 (322)
T PRK11133        107 LRTPGLLVMDMDSTAIQIECIDEIAKLAGTGEEVAEVTERAMRGELDFEASLRQRVATLKGADANILQQVREN--LPLMP  184 (322)
T ss_pred             ccCCCEEEEECCCCCcchHHHHHHHHHhCCchHHHHHHHHHHcCCcCHHHHHHHHHHHhCCCCHHHHHHHHHh--CCCCh
Confidence            567899999999999999999999999999888788889999999999999988888776643 334444333  68999


Q ss_pred             cHHHHHHHHHHCCCeEEEEcCCCHHHHHHHH-HcCCCccc
Q 028799          159 GIDELVKKLKANNKNVYLISGGFRHMINILN-ILKWDVLK  197 (203)
Q Consensus       159 G~~elL~~Lk~~G~~vaIVTn~~~~~i~~ll-~lGL~~~~  197 (203)
                      |+.+++++|++.|++++|+||++..+++.++ ++|++..+
T Consensus       185 Ga~elL~~Lk~~G~~~aIvSgg~~~~~~~l~~~Lgld~~~  224 (322)
T PRK11133        185 GLTELVLKLQALGWKVAIASGGFTYFADYLRDKLRLDAAV  224 (322)
T ss_pred             hHHHHHHHHHHcCCEEEEEECCcchhHHHHHHHcCCCeEE
Confidence            9999999999999999999999999999999 99997643

>PLN02770 haloacid dehalogenase-like hydrolase family protein

Probab=99.67  E-value=9e-16  Score=130.23  Aligned_cols=135  Identities=17%  Similarity=0.157  Sum_probs=93.8

Q ss_pred             CCCCCChHHHHhhccCCcEEEEECCCcccccch-----HHHHHHHcCCC----ccHHHHHHHHhCCCCCHHHHHHHHHhc
Q 028799           67 SENTLPSKEVLQLWRTADAVCFDVDSTVCVDEG-----IDELAEFCGAG----KAVAEWTARAMGGSVPFEEALAARLSL  137 (203)
Q Consensus        67 ~~~~~~~~~~~~~~~~~kaVIFD~DGTLiDse~-----~~~la~~~G~~----~~~~~~~~~~~gG~~~~~e~l~~~~~~  137 (203)
                      .+|+..||.-+.-..++++|+|||||||+|++.     |...++.+|.+    ...........|  .+..+.+...+..
T Consensus         6 ~~~~~~~~~~~~~~~~~k~viFDlDGTLiDs~~~~~~a~~~~~~~~g~~~g~~~~~~~~~~~~~G--~~~~~~~~~~~~~   83 (248)
T PLN02770          6 GENSVESKSSLSGLAPLEAVLFDVDGTLCDSDPLHYYAFREMLQEINFNGGVPITEEFFVENIAG--KHNEDIALGLFPD   83 (248)
T ss_pred             CcccccccccccccCccCEEEEcCCCccCcCHHHHHHHHHHHHHHhccccCCCCCHHHHHHHcCC--CCHHHHHHHHcCc
Confidence            467888887788888899999999999999975     45566677542    222222333344  3555554433221


Q ss_pred             cCCC----HHHHHHHHHh---CCCCCCCcHHHHHHHHHHCCCeEEEEcCCCHHHHHHHH-HcCCCccceEEecC
Q 028799          138 FKPS----LSQVQDFLEK---RPPRLSPGIDELVKKLKANNKNVYLISGGFRHMINILN-ILKWDVLKVIQITS  203 (203)
Q Consensus       138 ~~~~----~e~l~~~~~~---~~~~l~PG~~elL~~Lk~~G~~vaIVTn~~~~~i~~ll-~lGL~~~~~i~it~  203 (203)
                      ....    ...+.+++.+   ....++||+.++|++|+++|++++|+||+.+..++..+ ++|+..++..++++
T Consensus        84 ~~~~~~~~~~~~~~~y~~~~~~~~~l~pgv~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~~~Fd~iv~~  157 (248)
T PLN02770         84 DLERGLKFTDDKEALFRKLASEQLKPLNGLYKLKKWIEDRGLKRAAVTNAPRENAELMISLLGLSDFFQAVIIG  157 (248)
T ss_pred             chhhHHHHHHHHHHHHHHHHHhcCCcCccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCChhhCcEEEec
Confidence            0000    1112223321   24789999999999999999999999999999999999 99999988877764

>PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed

Probab=99.65  E-value=2.4e-15  Score=125.12  Aligned_cols=110  Identities=19%  Similarity=0.308  Sum_probs=92.4

Q ss_pred             CcEEEEECCCcccccchHHHHHHHcCCCccHHHHHHHHhCCCCCHHHHHHHHHhccCCC-HHHHHHHHHhCCCCCCCcHH
Q 028799           83 ADAVCFDVDSTVCVDEGIDELAEFCGAGKAVAEWTARAMGGSVPFEEALAARLSLFKPS-LSQVQDFLEKRPPRLSPGID  161 (203)
Q Consensus        83 ~kaVIFD~DGTLiDse~~~~la~~~G~~~~~~~~~~~~~gG~~~~~e~l~~~~~~~~~~-~e~l~~~~~~~~~~l~PG~~  161 (203)
                      -++++|||||||++++....+++.++. ....++..+++.|.+++.+.+..++..+... .+++.+++.+. .+++||+.
T Consensus         3 ~~~vifDfDgTi~~~d~~~~~~~~~~~-~~~~~i~~~~~~g~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~-~~l~pG~~   80 (219)
T PRK09552          3 SIQIFCDFDGTITNNDNIIAIMKKFAP-PEWEELKDDILSQELSIQEGVGQMFQLLPSNLKEEIIQFLLET-AEIREGFH   80 (219)
T ss_pred             CcEEEEcCCCCCCcchhhHHHHHHhCH-HHHHHHHHHHHhCCcCHHHHHHHHHHhCCCCchHHHHHHHHhC-CCcCcCHH
Confidence            348999999999999997777777764 3446777888999999999999999887653 46677776653 78999999


Q ss_pred             HHHHHHHHCCCeEEEEcCCCHHHHHHHH-HcCCCc
Q 028799          162 ELVKKLKANNKNVYLISGGFRHMINILN-ILKWDV  195 (203)
Q Consensus       162 elL~~Lk~~G~~vaIVTn~~~~~i~~ll-~lGL~~  195 (203)
                      ++|++|+++|++++|+||+++..+++++ ++ +..
T Consensus        81 e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~-~~~  114 (219)
T PRK09552         81 EFVQFVKENNIPFYVVSGGMDFFVYPLLQGL-IPK  114 (219)
T ss_pred             HHHHHHHHcCCeEEEECCCcHHHHHHHHHHh-CCc
Confidence            9999999999999999999999999999 77 643

>PLN03243 haloacid dehalogenase-like hydrolase; Provisional

Probab=99.64  E-value=3e-15  Score=128.46  Aligned_cols=123  Identities=21%  Similarity=0.211  Sum_probs=88.0

Q ss_pred             hhccCCcEEEEECCCcccccc-h-----HHHHHHHcCCCccHHHHHHHHhCCCCCHHHHHHHHHhccCCCHH---HH---
Q 028799           78 QLWRTADAVCFDVDSTVCVDE-G-----IDELAEFCGAGKAVAEWTARAMGGSVPFEEALAARLSLFKPSLS---QV---  145 (203)
Q Consensus        78 ~~~~~~kaVIFD~DGTLiDse-~-----~~~la~~~G~~~~~~~~~~~~~gG~~~~~e~l~~~~~~~~~~~e---~l---  145 (203)
                      .+-+.+++|||||||||+||+ .     |..+++.+|+.....+....++|  .+..+.+...+.. ..+.+   ++   
T Consensus        19 ~~~~~~k~vIFDlDGTLvDS~~~~~~~a~~~~~~~~G~~~~~~e~~~~~~G--~~~~~~~~~l~~~-~~~~~~~~~l~~~   95 (260)
T PLN03243         19 RLGCGWLGVVLEWEGVIVEDDSELERKAWRALAEEEGKRPPPAFLLKRAEG--MKNEQAISEVLCW-SRDFLQMKRLAIR   95 (260)
T ss_pred             HhcCCceEEEEeCCCceeCCchHHHHHHHHHHHHHcCCCCCHHHHHHHhcC--CCHHHHHHHHhcc-CCCHHHHHHHHHH
Confidence            345678999999999999995 3     34566778887554455555666  5555555443321 11111   11   


Q ss_pred             -HHHHH---hCCCCCCCcHHHHHHHHHHCCCeEEEEcCCCHHHHHHHH-HcCCCccceEEecC
Q 028799          146 -QDFLE---KRPPRLSPGIDELVKKLKANNKNVYLISGGFRHMINILN-ILKWDVLKVIQITS  203 (203)
Q Consensus       146 -~~~~~---~~~~~l~PG~~elL~~Lk~~G~~vaIVTn~~~~~i~~ll-~lGL~~~~~i~it~  203 (203)
                       ..++.   .....++||+.++|+.|+++|++++|+||+.+..++.++ ++|+..++..++++
T Consensus        96 ~~~~~~~~~~~~~~l~pg~~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~~~Fd~ii~~  158 (260)
T PLN03243         96 KEDLYEYMQGGLYRLRPGSREFVQALKKHEIPIAVASTRPRRYLERAIEAVGMEGFFSVVLAA  158 (260)
T ss_pred             HHHHHHHHHccCcccCCCHHHHHHHHHHCCCEEEEEeCcCHHHHHHHHHHcCCHhhCcEEEec
Confidence             12221   224679999999999999999999999999999999999 99999888887764

>TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like

Probab=99.64  E-value=5.8e-15  Score=117.49  Aligned_cols=113  Identities=34%  Similarity=0.516  Sum_probs=92.5

Q ss_pred             EEEEECCCcccccch-HHHHHHHcCCCccHHHHHHHHhCCCCCHHHHHHHHHhccCCC-HHHHHH-HHHhCCCCCCCcHH
Q 028799           85 AVCFDVDSTVCVDEG-IDELAEFCGAGKAVAEWTARAMGGSVPFEEALAARLSLFKPS-LSQVQD-FLEKRPPRLSPGID  161 (203)
Q Consensus        85 aVIFD~DGTLiDse~-~~~la~~~G~~~~~~~~~~~~~gG~~~~~e~l~~~~~~~~~~-~e~l~~-~~~~~~~~l~PG~~  161 (203)
                      +++|||||||++.++ +..+....|......++...++.|.+++.+.+..++..+.+. .+++.+ ++.+. ++++||+.
T Consensus         1 l~~fD~DgTl~~~~s~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~~   79 (177)
T TIGR01488         1 LAIFDFDGTLTRQDSLIDLLAKLLGTNDEVIELTRLAPSGRISFEDALGRRLALLHRSRSEEVAKEFLARQ-VALRPGAR   79 (177)
T ss_pred             CEEecCccccccchhhHHHHHHHhCChHHHHHHHHHHHCCCCCHHHHHHHHHHHhCCCCHHHHHHHHHHhc-CCcCcCHH
Confidence            379999999999998 555555666544556788888999999999998888777663 355555 66653 67899999


Q ss_pred             HHHHHHHHCCCeEEEEcCCCHHHHHHHH-HcCCCccce
Q 028799          162 ELVKKLKANNKNVYLISGGFRHMINILN-ILKWDVLKV  198 (203)
Q Consensus       162 elL~~Lk~~G~~vaIVTn~~~~~i~~ll-~lGL~~~~~  198 (203)
                      ++++.++++|++++|+|+++...+++++ ++|++.++.
T Consensus        80 ~~l~~l~~~g~~~~ivS~~~~~~i~~~~~~~g~~~~~~  117 (177)
T TIGR01488        80 ELISWLKERGIDTVIVSGGFDFFVEPVAEKLGIDDVFA  117 (177)
T ss_pred             HHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCchhee
Confidence            9999999999999999999999999999 999986543

Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences.

>COG0637 Predicted phosphatase/phosphohexomutase [General function prediction only]

Probab=99.62  E-value=4.9e-15  Score=124.13  Aligned_cols=121  Identities=21%  Similarity=0.166  Sum_probs=83.0

Q ss_pred             CCcEEEEECCCcccccch-----HHHHHHHcCCCccHHHHHHHHhCCCC-CHHHHHHHHHhccCC-CHHHHHH----HH-
Q 028799           82 TADAVCFDVDSTVCVDEG-----IDELAEFCGAGKAVAEWTARAMGGSV-PFEEALAARLSLFKP-SLSQVQD----FL-  149 (203)
Q Consensus        82 ~~kaVIFD~DGTLiDse~-----~~~la~~~G~~~~~~~~~~~~~gG~~-~~~e~l~~~~~~~~~-~~e~l~~----~~-  149 (203)
                      +++++||||||||+||+.     |..+++.+|+......... ..++.. ...+.+........+ ......+    .. 
T Consensus         1 ~~~avIFD~DGvLvDse~~~~~a~~~~~~~~g~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (221)
T COG0637           1 MIKAVIFDMDGTLVDSEPLHARAWLEALKEYGIEISDEEIRE-LHGGGIARIIDLLRKLAAGEDPADLAELERLLYEAEA   79 (221)
T ss_pred             CCcEEEEcCCCCcCcchHHHHHHHHHHHHHcCCCCCHHHHHH-HHCCChHHHHHHHHHHhcCCcccCHHHHHHHHHHHHH
Confidence            478999999999999986     5566778898755433333 344322 122222222221111 1111111    11 


Q ss_pred             H-hCCCCCCCcHHHHHHHHHHCCCeEEEEcCCCHHHHHHHH-HcCCCccceEEecC
Q 028799          150 E-KRPPRLSPGIDELVKKLKANNKNVYLISGGFRHMINILN-ILKWDVLKVIQITS  203 (203)
Q Consensus       150 ~-~~~~~l~PG~~elL~~Lk~~G~~vaIVTn~~~~~i~~ll-~lGL~~~~~i~it~  203 (203)
                      . ....+++||+.++|+.|+++|++++++||+++..++.++ .+|+.+++...||+
T Consensus        80 ~~~~~~~~~pGv~~~l~~L~~~~i~~avaS~s~~~~~~~~L~~~gl~~~f~~~v~~  135 (221)
T COG0637          80 LELEGLKPIPGVVELLEQLKARGIPLAVASSSPRRAAERVLARLGLLDYFDVIVTA  135 (221)
T ss_pred             hhhcCCCCCccHHHHHHHHHhcCCcEEEecCChHHHHHHHHHHccChhhcchhccH
Confidence            1 124789999999999999999999999999999999999 99999998887764

>TIGR03351 PhnX-like phosphonatase-like hydrolase

Probab=99.62  E-value=1.1e-14  Score=120.21  Aligned_cols=119  Identities=23%  Similarity=0.262  Sum_probs=83.4

Q ss_pred             CcEEEEECCCcccccch-----HHHHHHHcCCCccHHHHHHHHhCCCCCHHHHHHHHHhccCCCH---HHH----HHHHH
Q 028799           83 ADAVCFDVDSTVCVDEG-----IDELAEFCGAGKAVAEWTARAMGGSVPFEEALAARLSLFKPSL---SQV----QDFLE  150 (203)
Q Consensus        83 ~kaVIFD~DGTLiDse~-----~~~la~~~G~~~~~~~~~~~~~gG~~~~~e~l~~~~~~~~~~~---e~l----~~~~~  150 (203)
                      +++|+|||||||+|+..     +..+++.+|.+....+....+.+  .+..+.+...+.....+.   +++    .+.+.
T Consensus         1 ~k~iiFD~DGTL~ds~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (220)
T TIGR03351         1 ISLVVLDMAGTTVDEDGLVYRALRQAVTAAGLSPTPEEVQSAWMG--QSKIEAIRALLALDGADEAEAQAAFADFEERLA   78 (220)
T ss_pred             CcEEEEecCCCeeccCchHHHHHHHHHHHcCCCCCHHHHHHhhcC--CCHHHHHHHHHhccCCCHHHHHHHHHHHHHHHH
Confidence            57899999999999975     44556678876543333332454  455665555443211121   111    12221


Q ss_pred             ----hCCCCCCCcHHHHHHHHHHCCCeEEEEcCCCHHHHHHHH-HcCCC--ccceEEecC
Q 028799          151 ----KRPPRLSPGIDELVKKLKANNKNVYLISGGFRHMINILN-ILKWD--VLKVIQITS  203 (203)
Q Consensus       151 ----~~~~~l~PG~~elL~~Lk~~G~~vaIVTn~~~~~i~~ll-~lGL~--~~~~i~it~  203 (203)
                          ....+++||+.++|++|+++|++++|+||++...++.++ .+|+.  .++...+++
T Consensus        79 ~~~~~~~~~l~~G~~~~L~~L~~~g~~~~ivT~~~~~~~~~~l~~~~l~~~~~f~~i~~~  138 (220)
T TIGR03351        79 EAYDDGPPVALPGAEEAFRSLRSSGIKVALTTGFDRDTAERLLEKLGWTVGDDVDAVVCP  138 (220)
T ss_pred             HHhcccCCccCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHhhhhhhccCCEEEcC
Confidence                123689999999999999999999999999999999999 99998  888777764

This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the

>PRK13288 pyrophosphatase PpaX; Provisional

Probab=99.60  E-value=1.1e-14  Score=120.13  Aligned_cols=117  Identities=14%  Similarity=0.144  Sum_probs=80.4

Q ss_pred             CCcEEEEECCCcccccch-----HHHHHHHcCCCccHHHHHHHHhCCCCCHHHHHHHHHhccCCCHHH----HHHHHHh-
Q 028799           82 TADAVCFDVDSTVCVDEG-----IDELAEFCGAGKAVAEWTARAMGGSVPFEEALAARLSLFKPSLSQ----VQDFLEK-  151 (203)
Q Consensus        82 ~~kaVIFD~DGTLiDse~-----~~~la~~~G~~~~~~~~~~~~~gG~~~~~e~l~~~~~~~~~~~e~----l~~~~~~-  151 (203)
                      ++++|+|||||||+|++.     +..+++.+|......+......|  .+..+.+... .  ....+.    +.+++.+ 
T Consensus         2 ~~~~viFD~DGTL~ds~~~~~~a~~~~~~~~~~~~~~~~~~~~~~G--~~~~~~~~~~-~--~~~~~~~~~~~~~~~~~~   76 (214)
T PRK13288          2 KINTVLFDLDGTLINTNELIISSFLHTLKTYYPNQYKREDVLPFIG--PSLHDTFSKI-D--ESKVEEMITTYREFNHEH   76 (214)
T ss_pred             CccEEEEeCCCcCccCHHHHHHHHHHHHHHhCCCCCCHHHHHHHhC--cCHHHHHHhc-C--HHHHHHHHHHHHHHHHHh
Confidence            578999999999999975     34455666653222233344454  4555544321 1  111222    2222221 


Q ss_pred             --CCCCCCCcHHHHHHHHHHCCCeEEEEcCCCHHHHHHHH-HcCCCccceEEecC
Q 028799          152 --RPPRLSPGIDELVKKLKANNKNVYLISGGFRHMINILN-ILKWDVLKVIQITS  203 (203)
Q Consensus       152 --~~~~l~PG~~elL~~Lk~~G~~vaIVTn~~~~~i~~ll-~lGL~~~~~i~it~  203 (203)
                        ....++||+.++|++|+++|++++|+||++...++..+ .+|+..++..++++
T Consensus        77 ~~~~~~~~~g~~~~l~~L~~~g~~~~i~S~~~~~~~~~~l~~~gl~~~f~~i~~~  131 (214)
T PRK13288         77 HDELVTEYETVYETLKTLKKQGYKLGIVTTKMRDTVEMGLKLTGLDEFFDVVITL  131 (214)
T ss_pred             hhhhcccCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCChhceeEEEec
Confidence              13679999999999999999999999999999999999 99999988777653

>PRK13226 phosphoglycolate phosphatase; Provisional

Probab=99.59  E-value=1.7e-14  Score=120.93  Aligned_cols=121  Identities=14%  Similarity=0.178  Sum_probs=82.0

Q ss_pred             ccCCcEEEEECCCcccccch-----HHHHHHHcCCCccHHHHHHHHhCCCCCHHHHHHHHHhccCC-CHHH----HHHHH
Q 028799           80 WRTADAVCFDVDSTVCVDEG-----IDELAEFCGAGKAVAEWTARAMGGSVPFEEALAARLSLFKP-SLSQ----VQDFL  149 (203)
Q Consensus        80 ~~~~kaVIFD~DGTLiDse~-----~~~la~~~G~~~~~~~~~~~~~gG~~~~~e~l~~~~~~~~~-~~e~----l~~~~  149 (203)
                      -.++++|||||||||+||..     +..+.+.+|.+....+.....+|  .+....+......... ..++    +.+.+
T Consensus         9 ~~~~k~viFD~DGTL~Ds~~~~~~a~~~~~~~~g~~~~~~~~~~~~~g--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   86 (229)
T PRK13226          9 VRFPRAVLFDLDGTLLDSAPDMLATVNAMLAARGRAPITLAQLRPVVS--KGARAMLAVAFPELDAAARDALIPEFLQRY   86 (229)
T ss_pred             cccCCEEEEcCcCccccCHHHHHHHHHHHHHHCCCCCCCHHHHHHHhh--hHHHHHHHHHhccCChHHHHHHHHHHHHHH
Confidence            35679999999999999975     44566678875332333444444  3444444332221111 1111    22233


Q ss_pred             Hh---CCCCCCCcHHHHHHHHHHCCCeEEEEcCCCHHHHHHHH-HcCCCccceEEec
Q 028799          150 EK---RPPRLSPGIDELVKKLKANNKNVYLISGGFRHMINILN-ILKWDVLKVIQIT  202 (203)
Q Consensus       150 ~~---~~~~l~PG~~elL~~Lk~~G~~vaIVTn~~~~~i~~ll-~lGL~~~~~i~it  202 (203)
                      .+   ...+++||+.++|++|+++|++++|+||+....++.++ ++|+..++..+++
T Consensus        87 ~~~~~~~~~~~pg~~~~L~~L~~~g~~l~i~Tn~~~~~~~~~l~~~~l~~~f~~i~~  143 (229)
T PRK13226         87 EALIGTQSQLFDGVEGMLQRLECAGCVWGIVTNKPEYLARLILPQLGWEQRCAVLIG  143 (229)
T ss_pred             HHhhhhcCeeCCCHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCchhcccEEEe
Confidence            21   13689999999999999999999999999999998888 9999887776665

>PLN02575 haloacid dehalogenase-like hydrolase

Probab=99.59  E-value=2.5e-14  Score=128.80  Aligned_cols=121  Identities=17%  Similarity=0.125  Sum_probs=87.3

Q ss_pred             cCCcEEEEECCCcccccch------HHHHHHHcCCCccHHHHHHHHhCCCCCHHHHHHHHHhccCC--CHHH----HHHH
Q 028799           81 RTADAVCFDVDSTVCVDEG------IDELAEFCGAGKAVAEWTARAMGGSVPFEEALAARLSLFKP--SLSQ----VQDF  148 (203)
Q Consensus        81 ~~~kaVIFD~DGTLiDse~------~~~la~~~G~~~~~~~~~~~~~gG~~~~~e~l~~~~~~~~~--~~e~----l~~~  148 (203)
                      +..++|||||||||+|++.      |..+++.+|......+.....+|  .+..+.+...+.....  ..++    +.++
T Consensus       129 ~~~~~VIFDlDGTLIDS~~~i~~~a~~~l~~e~G~~~~~~e~~~~~~G--~~~~~~l~~ll~~~~~~~~~e~l~~~~~~~  206 (381)
T PLN02575        129 CGWLGAIFEWEGVIIEDNPDLENQAWLTLAQEEGKSPPPAFILRRVEG--MKNEQAISEVLCWSRDPAELRRMATRKEEI  206 (381)
T ss_pred             CCCCEEEEcCcCcceeCHHHHHHHHHHHHHHHcCCCCCHHHHHHHhcC--CCHHHHHHHHhhccCCHHHHHHHHHHHHHH
Confidence            3478999999999999874      33456678886554445556666  5666666554332111  1111    2233


Q ss_pred             HHh---CCCCCCCcHHHHHHHHHHCCCeEEEEcCCCHHHHHHHH-HcCCCccceEEecC
Q 028799          149 LEK---RPPRLSPGIDELVKKLKANNKNVYLISGGFRHMINILN-ILKWDVLKVIQITS  203 (203)
Q Consensus       149 ~~~---~~~~l~PG~~elL~~Lk~~G~~vaIVTn~~~~~i~~ll-~lGL~~~~~i~it~  203 (203)
                      +.+   ....++||+.++|+.|+++|++++|+||+.+..++.++ ++||..++..++++
T Consensus       207 y~~~~~~~~~l~pGa~ElL~~Lk~~GiklaIaSn~~~~~~~~~L~~lgL~~yFd~Iv~s  265 (381)
T PLN02575        207 YQALQGGIYRLRTGSQEFVNVLMNYKIPMALVSTRPRKTLENAIGSIGIRGFFSVIVAA  265 (381)
T ss_pred             HHHHhccCCCcCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCHHHceEEEec
Confidence            322   23679999999999999999999999999999999999 99999988887764

>PRK13225 phosphoglycolate phosphatase; Provisional

Probab=99.58  E-value=1.7e-14  Score=124.64  Aligned_cols=118  Identities=19%  Similarity=0.125  Sum_probs=82.4

Q ss_pred             CCcEEEEECCCcccccch-----HHHHHHHcCCCccHHHHHHHHhCCCCCHHHHHHHHHhccCCCHH----HHHHHHHh-
Q 028799           82 TADAVCFDVDSTVCVDEG-----IDELAEFCGAGKAVAEWTARAMGGSVPFEEALAARLSLFKPSLS----QVQDFLEK-  151 (203)
Q Consensus        82 ~~kaVIFD~DGTLiDse~-----~~~la~~~G~~~~~~~~~~~~~gG~~~~~e~l~~~~~~~~~~~e----~l~~~~~~-  151 (203)
                      .+++++|||||||+||+.     +..+++.+|......+...+.++  .+..+.+.. +.......+    .+.+++.. 
T Consensus        61 ~~k~vIFDlDGTLiDS~~~~~~a~~~~~~~~G~~~~~~~~~~~~~g--~~~~~i~~~-~~~~~~~~~~~~~~~~~~~~~~  137 (273)
T PRK13225         61 TLQAIIFDFDGTLVDSLPTVVAIANAHAPDFGYDPIDERDYAQLRQ--WSSRTIVRR-AGLSPWQQARLLQRVQRQLGDC  137 (273)
T ss_pred             hcCEEEECCcCccccCHHHHHHHHHHHHHHCCCCCCCHHHHHHHhC--ccHHHHHHH-cCCCHHHHHHHHHHHHHHHHhh
Confidence            477999999999999974     45566778876443444555555  344444332 221100111    12222222 


Q ss_pred             -CCCCCCCcHHHHHHHHHHCCCeEEEEcCCCHHHHHHHH-HcCCCccceEEec
Q 028799          152 -RPPRLSPGIDELVKKLKANNKNVYLISGGFRHMINILN-ILKWDVLKVIQIT  202 (203)
Q Consensus       152 -~~~~l~PG~~elL~~Lk~~G~~vaIVTn~~~~~i~~ll-~lGL~~~~~i~it  202 (203)
                       ...+++||+.++|++|+++|++++|+||+.+..++.++ ++|+..++..+++
T Consensus       138 ~~~~~l~pg~~e~L~~L~~~gi~laIvSn~~~~~~~~~L~~~gl~~~F~~vi~  190 (273)
T PRK13225        138 LPALQLFPGVADLLAQLRSRSLCLGILSSNSRQNIEAFLQRQGLRSLFSVVQA  190 (273)
T ss_pred             cccCCcCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCChhheEEEEe
Confidence             13688999999999999999999999999999999999 9999888877665

>TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase

Probab=99.58  E-value=4.6e-14  Score=113.01  Aligned_cols=115  Identities=16%  Similarity=0.204  Sum_probs=87.0

Q ss_pred             EEEEECCCcccccchHHHHHHHcCCCccHHHHHHHHhCC--CCCHHHHHHHHHhccCCCHHHHHHHHHhCCCCCCCcHHH
Q 028799           85 AVCFDVDSTVCVDEGIDELAEFCGAGKAVAEWTARAMGG--SVPFEEALAARLSLFKPSLSQVQDFLEKRPPRLSPGIDE  162 (203)
Q Consensus        85 aVIFD~DGTLiDse~~~~la~~~G~~~~~~~~~~~~~gG--~~~~~e~l~~~~~~~~~~~e~l~~~~~~~~~~l~PG~~e  162 (203)
                      +++|||||||+|.+.+..+++.++.. ...++...+..+  ..++.+.+...+.....+.+++.+++..  .+++||+.+
T Consensus         3 ~iiFD~dgTL~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~l~~g~~~   79 (188)
T TIGR01489         3 VVVSDFDGTITLNDSDDWITDKFGPP-EANRLLDGVLSKTLSIKFMDRRMKGLLPSGLKEDEILEVLKS--APIDPGFKE   79 (188)
T ss_pred             EEEEeCCCcccCCCchHHHHHhcCcc-hhhHHHHHHhhcCCchHHHHHHHHHHhhcCCCHHHHHHHHHh--CCCCccHHH
Confidence            68999999999999988888888733 334444444442  3455555554443332255667776655  589999999


Q ss_pred             HHHHHHHCCCeEEEEcCCCHHHHHHHH-HcCCCccceEEec
Q 028799          163 LVKKLKANNKNVYLISGGFRHMINILN-ILKWDVLKVIQIT  202 (203)
Q Consensus       163 lL~~Lk~~G~~vaIVTn~~~~~i~~ll-~lGL~~~~~i~it  202 (203)
                      +++.|+++|++++|+||+....++.++ ++|+..++..+++
T Consensus        80 ll~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~~i~~  120 (188)
T TIGR01489        80 FIAFIKEHGIDFIVISDGNDFFIDPVLEGIGEKDVFIEIYS  120 (188)
T ss_pred             HHHHHHHcCCcEEEEeCCcHHHHHHHHHHcCChhheeEEec
Confidence            999999999999999999999999999 9999887766654

Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact.

>COG0546 Gph Predicted phosphatases [General function prediction only]

Probab=99.58  E-value=2.9e-14  Score=118.98  Aligned_cols=120  Identities=18%  Similarity=0.204  Sum_probs=84.8

Q ss_pred             cCCcEEEEECCCcccccch-----HHHHHHHcCCCccHHHHHHHHhCCCCCHHHHHHHHHhccCCC-----HHHH----H
Q 028799           81 RTADAVCFDVDSTVCVDEG-----IDELAEFCGAGKAVAEWTARAMGGSVPFEEALAARLSLFKPS-----LSQV----Q  146 (203)
Q Consensus        81 ~~~kaVIFD~DGTLiDse~-----~~~la~~~G~~~~~~~~~~~~~gG~~~~~e~l~~~~~~~~~~-----~e~l----~  146 (203)
                      +++++|+||+||||+|+..     +...++.+|.+....+.....+|  ....+.+.+........     .+.+    .
T Consensus         2 ~~~~~iiFDlDGTL~Ds~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (220)
T COG0546           2 MMIKAILFDLDGTLVDSAEDILRAFNAALAELGLPPLDEEEIRQLIG--LGLDELIERLLGEADEEAAAELVERLREEFL   79 (220)
T ss_pred             CCCCEEEEeCCCccccChHHHHHHHHHHHHHcCCCCCCHHHHHHHhc--CCHHHHHHHHhccccchhHHHHHHHHHHHHH
Confidence            5688999999999999975     34566788887433444555565  34444444433221100     1111    1


Q ss_pred             HHHHhCC-CCCCCcHHHHHHHHHHCCCeEEEEcCCCHHHHHHHH-HcCCCccceEEec
Q 028799          147 DFLEKRP-PRLSPGIDELVKKLKANNKNVYLISGGFRHMINILN-ILKWDVLKVIQIT  202 (203)
Q Consensus       147 ~~~~~~~-~~l~PG~~elL~~Lk~~G~~vaIVTn~~~~~i~~ll-~lGL~~~~~i~it  202 (203)
                      +.+.+.. ..++||+.++|++|+++|++++|+||++...++.++ ++|+..++..+++
T Consensus        80 ~~~~~~~~~~~~~gv~e~L~~L~~~g~~l~i~T~k~~~~~~~~l~~~gl~~~F~~i~g  137 (220)
T COG0546          80 TAYAELLESRLFPGVKELLAALKSAGYKLGIVTNKPERELDILLKALGLADYFDVIVG  137 (220)
T ss_pred             HHHHhhccCccCCCHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHhCCccccceEEc
Confidence            2222221 479999999999999999999999999999999999 9999998887765

>TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic

Probab=99.56  E-value=6.1e-14  Score=114.89  Aligned_cols=116  Identities=16%  Similarity=0.161  Sum_probs=78.0

Q ss_pred             EEEECCCcccccch-----HHHHHHHcCCCccHHHHHHHHhCCCCCHHHHHHHHHhccCC--CHH---H----HHHHHHh
Q 028799           86 VCFDVDSTVCVDEG-----IDELAEFCGAGKAVAEWTARAMGGSVPFEEALAARLSLFKP--SLS---Q----VQDFLEK  151 (203)
Q Consensus        86 VIFD~DGTLiDse~-----~~~la~~~G~~~~~~~~~~~~~gG~~~~~e~l~~~~~~~~~--~~e---~----l~~~~~~  151 (203)
                      |||||||||+|++.     +....+.+|......+.....++  .+..+.+...+.....  +.+   +    +.+++.+
T Consensus         1 viFD~DGTL~Ds~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (213)
T TIGR01449         1 VLFDLDGTLVDSAPDIAAAVNMALAALGLPPATLARVIGFIG--NGVPVLMERVLAWAGQEPDAQRVAELRKLFDRHYEE   78 (213)
T ss_pred             CeecCCCccccCHHHHHHHHHHHHHHCCCCCCCHHHHHHHhc--ccHHHHHHHHhhccccccChHHHHHHHHHHHHHHHH
Confidence            68999999999875     33455667775322333444454  3444444443332211  211   1    2222322


Q ss_pred             ---CCCCCCCcHHHHHHHHHHCCCeEEEEcCCCHHHHHHHH-HcCCCccceEEecC
Q 028799          152 ---RPPRLSPGIDELVKKLKANNKNVYLISGGFRHMINILN-ILKWDVLKVIQITS  203 (203)
Q Consensus       152 ---~~~~l~PG~~elL~~Lk~~G~~vaIVTn~~~~~i~~ll-~lGL~~~~~i~it~  203 (203)
                         ....++||+.++|+.|+++|++++|+||+.+..++.++ ++|+..++...+++
T Consensus        79 ~~~~~~~~~~g~~~~L~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~~~~~~  134 (213)
T TIGR01449        79 VAGELTSVFPGVEATLGALRAKGLRLGLVTNKPTPLARPLLELLGLAKYFSVLIGG  134 (213)
T ss_pred             hccccCccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCcHhhCcEEEec
Confidence               13689999999999999999999999999999999999 99998887766653

This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702).

>TIGR02009 PGMB-YQAB-SF beta-phosphoglucomutase family hydrolase

Probab=99.55  E-value=9.6e-14  Score=111.18  Aligned_cols=115  Identities=23%  Similarity=0.267  Sum_probs=77.7

Q ss_pred             CcEEEEECCCcccccchH-----HHHHHHcCCCccHHHHHHHHhCCCCCHHHHHHHHHhccC--CCHHHH-------HHH
Q 028799           83 ADAVCFDVDSTVCVDEGI-----DELAEFCGAGKAVAEWTARAMGGSVPFEEALAARLSLFK--PSLSQV-------QDF  148 (203)
Q Consensus        83 ~kaVIFD~DGTLiDse~~-----~~la~~~G~~~~~~~~~~~~~gG~~~~~e~l~~~~~~~~--~~~e~l-------~~~  148 (203)
                      +++|+|||||||+|++..     ..+++.+|.+.. .++....++  .+..+.+...+....  .+.+++       .++
T Consensus         1 ~~~iiFD~DGTL~ds~~~~~~~~~~~~~~~g~~~~-~~~~~~~~g--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   77 (185)
T TIGR02009         1 YKAVIFDMDGVIVDTAPLHAQAWKHLADKYGIEFD-KQYNTSLGG--LSREDILRAILKLRKPGLSLETIHQLAERKNEL   77 (185)
T ss_pred             CCeEEEcCCCcccCChHHHHHHHHHHHHHcCCCCC-HHHHHHcCC--CCHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHH
Confidence            478999999999999863     345567787533 333343343  455555544433221  122221       122


Q ss_pred             HH----hCCCCCCCcHHHHHHHHHHCCCeEEEEcCCCHHHHHHHH-HcCCCccceEEec
Q 028799          149 LE----KRPPRLSPGIDELVKKLKANNKNVYLISGGFRHMINILN-ILKWDVLKVIQIT  202 (203)
Q Consensus       149 ~~----~~~~~l~PG~~elL~~Lk~~G~~vaIVTn~~~~~i~~ll-~lGL~~~~~i~it  202 (203)
                      +.    ..+..++||+.++|+.|+++|++++|+||+  ..++.++ .+|+..++..+++
T Consensus        78 ~~~~~~~~~~~~~~g~~~~l~~l~~~g~~i~i~S~~--~~~~~~l~~~~l~~~f~~v~~  134 (185)
T TIGR02009        78 YRELLRLTGAEVLPGIENFLKRLKKKGIAVGLGSSS--KNADRILAKLGLTDYFDAIVD  134 (185)
T ss_pred             HHHHHhccCCCCCcCHHHHHHHHHHcCCeEEEEeCc--hhHHHHHHHcChHHHCCEeee
Confidence            22    224689999999999999999999999998  5678888 9999887776654

All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509).

>PRK10826 2-deoxyglucose-6-phosphatase; Provisional

Probab=99.55  E-value=1.9e-13  Score=113.44  Aligned_cols=120  Identities=18%  Similarity=0.161  Sum_probs=82.0

Q ss_pred             CCcEEEEECCCcccccch-----HHHHHHHcCCCccHHHHHHHHhCCCCCHHHHHHHHHhc--cCC-CHHH-HH---HHH
Q 028799           82 TADAVCFDVDSTVCVDEG-----IDELAEFCGAGKAVAEWTARAMGGSVPFEEALAARLSL--FKP-SLSQ-VQ---DFL  149 (203)
Q Consensus        82 ~~kaVIFD~DGTLiDse~-----~~~la~~~G~~~~~~~~~~~~~gG~~~~~e~l~~~~~~--~~~-~~e~-l~---~~~  149 (203)
                      ++++|+|||||||+|++.     +..+++.+|......+.....++  ....+........  +.+ ..++ ..   +.+
T Consensus         6 ~~k~iiFD~DGTL~d~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~g--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (222)
T PRK10826          6 QILAAIFDMDGLLIDSEPLWDRAELDVMASLGVDISRREELPDTLG--LRIDQVVDLWYARQPWNGPSRQEVVQRIIARV   83 (222)
T ss_pred             cCcEEEEcCCCCCCcCHHHHHHHHHHHHHHCCCCCCHHHHHHHhhC--CCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHH
Confidence            578999999999999975     33455677876443344455555  3333333222111  111 2211 11   111


Q ss_pred             Hh---CCCCCCCcHHHHHHHHHHCCCeEEEEcCCCHHHHHHHH-HcCCCccceEEecC
Q 028799          150 EK---RPPRLSPGIDELVKKLKANNKNVYLISGGFRHMINILN-ILKWDVLKVIQITS  203 (203)
Q Consensus       150 ~~---~~~~l~PG~~elL~~Lk~~G~~vaIVTn~~~~~i~~ll-~lGL~~~~~i~it~  203 (203)
                      .+   ....++||+.++|+.|+++|++++|+||+....++.++ .+|+..++..++++
T Consensus        84 ~~~~~~~~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~~~~~~  141 (222)
T PRK10826         84 ISLIEETRPLLPGVREALALCKAQGLKIGLASASPLHMLEAVLTMFDLRDYFDALASA  141 (222)
T ss_pred             HHHHhcCCCCCCCHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHhCcchhcccEEEEc
Confidence            11   13689999999999999999999999999999999999 99999888877764

>PRK11587 putative phosphatase; Provisional

Probab=99.55  E-value=8.6e-14  Score=115.46  Aligned_cols=112  Identities=13%  Similarity=0.088  Sum_probs=74.3

Q ss_pred             CCcEEEEECCCcccccch-----HHHHHHHcCCCccHHHHHHHHhCCCCCHHHHHHHHHhccCCC--HHHHHHH--HH--
Q 028799           82 TADAVCFDVDSTVCVDEG-----IDELAEFCGAGKAVAEWTARAMGGSVPFEEALAARLSLFKPS--LSQVQDF--LE--  150 (203)
Q Consensus        82 ~~kaVIFD~DGTLiDse~-----~~~la~~~G~~~~~~~~~~~~~gG~~~~~e~l~~~~~~~~~~--~e~l~~~--~~--  150 (203)
                      ++++|+|||||||+|++.     +..+++.+|.+.  .+......|  .+..+.++.........  .+.+.++  +.  
T Consensus         2 ~~k~viFDlDGTL~Ds~~~~~~a~~~~~~~~g~~~--~~~~~~~~g--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   77 (218)
T PRK11587          2 RCKGFLFDLDGTLVDSLPAVERAWSNWADRHGIAP--DEVLNFIHG--KQAITSLRHFMAGASEAEIQAEFTRLEQIEAT   77 (218)
T ss_pred             CCCEEEEcCCCCcCcCHHHHHHHHHHHHHHcCCCH--HHHHHHHcC--CCHHHHHHHHhccCCcHHHHHHHHHHHHHHHh
Confidence            578999999999999975     455667888763  233333334  34444444322211111  1122211  11  


Q ss_pred             -hCCCCCCCcHHHHHHHHHHCCCeEEEEcCCCHHHHHHHH-HcCCCccc
Q 028799          151 -KRPPRLSPGIDELVKKLKANNKNVYLISGGFRHMINILN-ILKWDVLK  197 (203)
Q Consensus       151 -~~~~~l~PG~~elL~~Lk~~G~~vaIVTn~~~~~i~~ll-~lGL~~~~  197 (203)
                       .....++||+.++|+.|+++|++++|+||+....+...+ ..|+..+.
T Consensus        78 ~~~~~~~~pg~~e~L~~L~~~g~~~~ivTn~~~~~~~~~l~~~~l~~~~  126 (218)
T PRK11587         78 DTEGITALPGAIALLNHLNKLGIPWAIVTSGSVPVASARHKAAGLPAPE  126 (218)
T ss_pred             hhcCceeCcCHHHHHHHHHHcCCcEEEEcCCCchHHHHHHHhcCCCCcc
Confidence             124689999999999999999999999999988877777 88886543

>TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase

Probab=99.54  E-value=1.1e-13  Score=114.83  Aligned_cols=107  Identities=16%  Similarity=0.287  Sum_probs=89.6

Q ss_pred             EEEECCCcccccchHHHHHHHcCCCccHHHHHHHHhCCCCCHHHHHHHHHhccCCC-HHHHHHHHHhCCCCCCCcHHHHH
Q 028799           86 VCFDVDSTVCVDEGIDELAEFCGAGKAVAEWTARAMGGSVPFEEALAARLSLFKPS-LSQVQDFLEKRPPRLSPGIDELV  164 (203)
Q Consensus        86 VIFD~DGTLiDse~~~~la~~~G~~~~~~~~~~~~~gG~~~~~e~l~~~~~~~~~~-~e~l~~~~~~~~~~l~PG~~elL  164 (203)
                      ++|||||||++.+++..+++.++. +...++..+++.|.+++.+.+..++..++.+ .+++.+++.+ ..+++||+.+++
T Consensus         2 ~~fDFDgTit~~d~~~~~~~~~~~-~~~~~~~~~~~~g~~~~~e~~~~~~~~~~~~~~~~~~~~~~~-~~~l~pg~~e~l   79 (214)
T TIGR03333         2 IICDFDGTITNNDNIISIMKQFAP-PEWEALKDGVLSKTLSIQEGVGRMFGLLPSSLKEEITSFVLE-TAEIREGFREFV   79 (214)
T ss_pred             EEeccCCCCCcchhHHHHHHHhCc-HHHHHHHHHHHcCCccHHHHHHHHHhhCCCchHHHHHHHHHh-cCcccccHHHHH
Confidence            799999999999998888877754 3445677788888899999998888877654 4577776655 379999999999


Q ss_pred             HHHHHCCCeEEEEcCCCHHHHHHHH-HcCCC
Q 028799          165 KKLKANNKNVYLISGGFRHMINILN-ILKWD  194 (203)
Q Consensus       165 ~~Lk~~G~~vaIVTn~~~~~i~~ll-~lGL~  194 (203)
                      ++|+++|++++|+|++.+.++++++ .++..
T Consensus        80 ~~l~~~g~~~~IvS~~~~~~i~~il~~~~~~  110 (214)
T TIGR03333        80 AFINEHGIPFYVISGGMDFFVYPLLEGIVEK  110 (214)
T ss_pred             HHHHHCCCeEEEECCCcHHHHHHHHHhhCCc
Confidence            9999999999999999999999998 76543

Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX.

>TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase

Probab=99.53  E-value=1.5e-13  Score=116.32  Aligned_cols=117  Identities=18%  Similarity=0.205  Sum_probs=75.8

Q ss_pred             CcEEEEECCCcccccch------HHHHHHHcCCCccHHHHHHHHhCCCCCHHHHHHH-------------HHhccCCCHH
Q 028799           83 ADAVCFDVDSTVCVDEG------IDELAEFCGAGKAVAEWTARAMGGSVPFEEALAA-------------RLSLFKPSLS  143 (203)
Q Consensus        83 ~kaVIFD~DGTLiDse~------~~~la~~~G~~~~~~~~~~~~~gG~~~~~e~l~~-------------~~~~~~~~~e  143 (203)
                      +++|+|||||||+|++.      +...++.+|.+....+ ..+.+|  .+..+.+..             .++. ..+.+
T Consensus         2 ~k~viFD~DGTLiDs~~~~~~~a~~~~~~~~g~~~~~~~-~~~~~G--~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~   77 (253)
T TIGR01422         2 IEAVIFDWAGTTVDFGSFAPTQAFVEAFAEFGVQITLEE-ARGPMG--LGKWDHIRALLKMPAVAERWRAKFGR-LPTEA   77 (253)
T ss_pred             ceEEEEeCCCCeecCCCccHHHHHHHHHHHcCCCccHHH-HHHhcC--ccHHHHHHHHhcCHHHHHHHHHHhCC-CCCHH
Confidence            68999999999999853      2344556786543333 333344  222222211             1111 11222


Q ss_pred             HH-------HHHHH---hCCCCCCCcHHHHHHHHHHCCCeEEEEcCCCHHHHHHHH-HcCCCccc-eEEecC
Q 028799          144 QV-------QDFLE---KRPPRLSPGIDELVKKLKANNKNVYLISGGFRHMINILN-ILKWDVLK-VIQITS  203 (203)
Q Consensus       144 ~l-------~~~~~---~~~~~l~PG~~elL~~Lk~~G~~vaIVTn~~~~~i~~ll-~lGL~~~~-~i~it~  203 (203)
                      ++       .+++.   .....++||+.++|+.|+++|++++|+||+++..++.++ .+|+..++ ..++++
T Consensus        78 ~~~~~~~~~~~~~~~~~~~~~~~~pg~~e~L~~L~~~g~~l~IvT~~~~~~~~~~l~~~gl~~~f~d~ii~~  149 (253)
T TIGR01422        78 DIEAIYEAFEPLQLAKLAEYSSPIPGVIEVIAYLRARGIKIGSTTGYTREMMDVVAPEAALQGYRPDYNVTT  149 (253)
T ss_pred             HHHHHHHHHHHHHHHHHHhcCccCCCHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHHHHhcCCCCceEEcc
Confidence            21       11111   124689999999999999999999999999999999999 99998774 666654

This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent.

>PRK13222 phosphoglycolate phosphatase; Provisional

Probab=99.52  E-value=4.4e-13  Score=110.59  Aligned_cols=120  Identities=18%  Similarity=0.166  Sum_probs=81.7

Q ss_pred             cCCcEEEEECCCcccccch-----HHHHHHHcCCCccHHHHHHHHhCCCCCHHHHHHHHHhcc-CC-CHHH-------HH
Q 028799           81 RTADAVCFDVDSTVCVDEG-----IDELAEFCGAGKAVAEWTARAMGGSVPFEEALAARLSLF-KP-SLSQ-------VQ  146 (203)
Q Consensus        81 ~~~kaVIFD~DGTLiDse~-----~~~la~~~G~~~~~~~~~~~~~gG~~~~~e~l~~~~~~~-~~-~~e~-------l~  146 (203)
                      .++++++||+||||+|+..     +..+++.+|.+..........++  ....+.+...+... .. +.++       +.
T Consensus         4 ~~~~~iiFD~DGTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (226)
T PRK13222          4 MDIRAVAFDLDGTLVDSAPDLAAAVNAALAALGLPPAGEERVRTWVG--NGADVLVERALTWAGREPDEELLEKLRELFD   81 (226)
T ss_pred             CcCcEEEEcCCcccccCHHHHHHHHHHHHHHCCCCCCCHHHHHHHhC--ccHHHHHHHHHhhccCCccHHHHHHHHHHHH
Confidence            4688999999999999964     44556677875332333444444  33444444433221 01 2222       22


Q ss_pred             HHHHh---CCCCCCCcHHHHHHHHHHCCCeEEEEcCCCHHHHHHHH-HcCCCccceEEec
Q 028799          147 DFLEK---RPPRLSPGIDELVKKLKANNKNVYLISGGFRHMINILN-ILKWDVLKVIQIT  202 (203)
Q Consensus       147 ~~~~~---~~~~l~PG~~elL~~Lk~~G~~vaIVTn~~~~~i~~ll-~lGL~~~~~i~it  202 (203)
                      +++..   ....++||+.++++.|++.|++++|+||+....++.++ .+|+..++..+++
T Consensus        82 ~~~~~~~~~~~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~~~~~  141 (226)
T PRK13222         82 RHYAENVAGGSRLYPGVKETLAALKAAGYPLAVVTNKPTPFVAPLLEALGIADYFSVVIG  141 (226)
T ss_pred             HHHHHhccccCccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCccCccEEEc
Confidence            23332   13689999999999999999999999999999999999 9999887766654

>PRK13478 phosphonoacetaldehyde hydrolase; Provisional

Probab=99.51  E-value=4e-13  Score=114.88  Aligned_cols=119  Identities=18%  Similarity=0.163  Sum_probs=76.1

Q ss_pred             cCCcEEEEECCCcccccch------HHHHHHHcCCCccHHHHHHHHhCCCCCHHHHHH-------------HHHhccCCC
Q 028799           81 RTADAVCFDVDSTVCVDEG------IDELAEFCGAGKAVAEWTARAMGGSVPFEEALA-------------ARLSLFKPS  141 (203)
Q Consensus        81 ~~~kaVIFD~DGTLiDse~------~~~la~~~G~~~~~~~~~~~~~gG~~~~~e~l~-------------~~~~~~~~~  141 (203)
                      +++++|||||||||+|++.      +..+++.+|.+... +...+.+|  .+..+.+.             ..++. ..+
T Consensus         2 ~~~k~vIFDlDGTLiDs~~~~~~~a~~~~~~~~g~~~~~-~~~~~~~G--~~~~~~~~~~~~~~~~~~~~~~~~g~-~~~   77 (267)
T PRK13478          2 MKIQAVIFDWAGTTVDFGSFAPTQAFVEAFAQFGVEITL-EEARGPMG--LGKWDHIRALLKMPRVAARWQAVFGR-LPT   77 (267)
T ss_pred             CceEEEEEcCCCCeecCCCccHHHHHHHHHHHcCCCCCH-HHHHHhcC--CCHHHHHHHHHhcHHHHHHHHHHhCC-CCC
Confidence            4679999999999999853      23445567875432 22334444  22222211             11111 012


Q ss_pred             HHHHH-------HHHH---hCCCCCCCcHHHHHHHHHHCCCeEEEEcCCCHHHHHHHH-HcCCCccc-eEEecC
Q 028799          142 LSQVQ-------DFLE---KRPPRLSPGIDELVKKLKANNKNVYLISGGFRHMINILN-ILKWDVLK-VIQITS  203 (203)
Q Consensus       142 ~e~l~-------~~~~---~~~~~l~PG~~elL~~Lk~~G~~vaIVTn~~~~~i~~ll-~lGL~~~~-~i~it~  203 (203)
                      .+++.       +++.   .....++||+.++|+.|+++|++++|+||+++..++.++ .+|+..++ ..++++
T Consensus        78 ~~~~~~~~~~~~~~~~~~~~~~~~~~pg~~elL~~L~~~g~~l~I~T~~~~~~~~~~l~~~~l~~~~~d~i~~~  151 (267)
T PRK13478         78 EADVDALYAAFEPLQIAKLADYATPIPGVLEVIAALRARGIKIGSTTGYTREMMDVVVPLAAAQGYRPDHVVTT  151 (267)
T ss_pred             HHHHHHHHHHHHHHHHHHHhhcCCCCCCHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHHhhcCCCceEEEcC
Confidence            22221       1221   123689999999999999999999999999999999888 88887653 565553

>TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein

Probab=99.51  E-value=2.3e-13  Score=112.96  Aligned_cols=106  Identities=18%  Similarity=0.265  Sum_probs=87.8

Q ss_pred             cEEEEECCCcccccchHHHHHHHcCCCccHHHHHHHHhCCCCCHHHHHHHHHhccC--C-CHHHHHHHHHhCCCCCCCcH
Q 028799           84 DAVCFDVDSTVCVDEGIDELAEFCGAGKAVAEWTARAMGGSVPFEEALAARLSLFK--P-SLSQVQDFLEKRPPRLSPGI  160 (203)
Q Consensus        84 kaVIFD~DGTLiDse~~~~la~~~G~~~~~~~~~~~~~gG~~~~~e~l~~~~~~~~--~-~~e~l~~~~~~~~~~l~PG~  160 (203)
                      ..++|||||||++. .|.+++...|....  ..   +.++...+.+.++.++..++  | +.++++++++.  ++++||+
T Consensus         2 ~la~FDlD~TLi~~-~w~~~~~~~g~~~~--~~---~~~~~~~~~~~~~~r~~ll~~~g~~~~~i~~~~~~--i~l~pga   73 (203)
T TIGR02137         2 EIACLDLEGVLVPE-IWIAFAEKTGIDAL--KA---TTRDIPDYDVLMKQRLRILDEHGLKLGDIQEVIAT--LKPLEGA   73 (203)
T ss_pred             eEEEEeCCcccHHH-HHHHHHHHcCCcHH--HH---HhcCCcCHHHHHHHHHHHHHHCCCCHHHHHHHHHh--CCCCccH
Confidence            46999999999975 69999999996432  22   34566789999988887763  5 67888888765  5899999


Q ss_pred             HHHHHHHHHCCCeEEEEcCCCHHHHHHHH-HcCCCccce
Q 028799          161 DELVKKLKANNKNVYLISGGFRHMINILN-ILKWDVLKV  198 (203)
Q Consensus       161 ~elL~~Lk~~G~~vaIVTn~~~~~i~~ll-~lGL~~~~~  198 (203)
                      .++|+.|++.| +++|+||+++..+++++ .+|++.++.
T Consensus        74 ~ell~~lk~~~-~~~IVS~~~~~~~~~il~~lgi~~~~a  111 (203)
T TIGR02137        74 VEFVDWLRERF-QVVILSDTFYEFSQPLMRQLGFPTLLC  111 (203)
T ss_pred             HHHHHHHHhCC-eEEEEeCChHHHHHHHHHHcCCchhhc
Confidence            99999999975 99999999999999999 999987665

This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338).

>PRK10725 fructose-1-P/6-phosphogluconate phosphatase; Provisional

Probab=99.50  E-value=3.8e-13  Score=108.29  Aligned_cols=119  Identities=15%  Similarity=0.081  Sum_probs=79.3

Q ss_pred             ccCCcEEEEECCCcccccch-----HHHHHHHcCCCccHHHHHHHHhCCCCCHHHHHHHHHhccC-C-CHHHHHH----H
Q 028799           80 WRTADAVCFDVDSTVCVDEG-----IDELAEFCGAGKAVAEWTARAMGGSVPFEEALAARLSLFK-P-SLSQVQD----F  148 (203)
Q Consensus        80 ~~~~kaVIFD~DGTLiDse~-----~~~la~~~G~~~~~~~~~~~~~gG~~~~~e~l~~~~~~~~-~-~~e~l~~----~  148 (203)
                      +.++++|+|||||||+||+.     +..+.+.+|.+.. .+.....+|  .+..+.+........ . ..+++..    +
T Consensus         2 ~~~~~~viFD~DGTLiDs~~~~~~a~~~~~~~~g~~~~-~~~~~~~~g--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (188)
T PRK10725          2 YDRYAGLIFDMDGTILDTEPTHRKAWREVLGRYGLQFD-EQAMVALNG--SPTWRIAQAIIELNQADLDPHALAREKTEA   78 (188)
T ss_pred             CCcceEEEEcCCCcCccCHHHHHHHHHHHHHHcCCCCC-HHHHHHhcC--CCHHHHHHHHHHHhCCCCCHHHHHHHHHHH
Confidence            45678999999999999975     4455567887643 233444444  333343333322111 1 2222221    2


Q ss_pred             HH---hCCCCCCCcHHHHHHHHHHCCCeEEEEcCCCHHHHHHHH-HcCCCccceEEecC
Q 028799          149 LE---KRPPRLSPGIDELVKKLKANNKNVYLISGGFRHMINILN-ILKWDVLKVIQITS  203 (203)
Q Consensus       149 ~~---~~~~~l~PG~~elL~~Lk~~G~~vaIVTn~~~~~i~~ll-~lGL~~~~~i~it~  203 (203)
                      +.   .....++|| .++|+.|+++ ++++|+||++...++..+ ++|+..++..++|+
T Consensus        79 ~~~~~~~~~~~~~~-~e~L~~L~~~-~~l~I~T~~~~~~~~~~l~~~~l~~~fd~i~~~  135 (188)
T PRK10725         79 VKSMLLDSVEPLPL-IEVVKAWHGR-RPMAVGTGSESAIAEALLAHLGLRRYFDAVVAA  135 (188)
T ss_pred             HHHHHhccCCCccH-HHHHHHHHhC-CCEEEEcCCchHHHHHHHHhCCcHhHceEEEeh
Confidence            22   123578886 5899999875 899999999999999999 99999988887764

>PRK13223 phosphoglycolate phosphatase; Provisional

Probab=99.50  E-value=2.3e-13  Score=117.24  Aligned_cols=120  Identities=19%  Similarity=0.128  Sum_probs=81.7

Q ss_pred             cCCcEEEEECCCcccccch-----HHHHHHHcCCCccHHHHHHHHhCCCCCHHHHHHHHHhc-c--CC-CH---HHH---
Q 028799           81 RTADAVCFDVDSTVCVDEG-----IDELAEFCGAGKAVAEWTARAMGGSVPFEEALAARLSL-F--KP-SL---SQV---  145 (203)
Q Consensus        81 ~~~kaVIFD~DGTLiDse~-----~~~la~~~G~~~~~~~~~~~~~gG~~~~~e~l~~~~~~-~--~~-~~---e~l---  145 (203)
                      +++++|+|||||||+|++.     +..+++.+|......+....+.+  .+..+.+...+.. .  .+ +.   +++   
T Consensus        11 ~~~k~viFDlDGTL~Ds~~~~~~a~~~~~~~~g~~~~~~~~~~~~~g--~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~   88 (272)
T PRK13223         11 RLPRLVMFDLDGTLVDSVPDLAAAVDRMLLELGRPPAGLEAVRHWVG--NGAPVLVRRALAGSIDHDGVDDELAEQALAL   88 (272)
T ss_pred             ccCCEEEEcCCCccccCHHHHHHHHHHHHHHcCCCCCCHHHHHHHhC--hhHHHHHHHHhcccccccCCCHHHHHHHHHH
Confidence            5678999999999999965     45666778876433333344555  3334444333221 1  01 11   122   


Q ss_pred             -HHHHHh--CCCCCCCcHHHHHHHHHHCCCeEEEEcCCCHHHHHHHH-HcCCCccceEEec
Q 028799          146 -QDFLEK--RPPRLSPGIDELVKKLKANNKNVYLISGGFRHMINILN-ILKWDVLKVIQIT  202 (203)
Q Consensus       146 -~~~~~~--~~~~l~PG~~elL~~Lk~~G~~vaIVTn~~~~~i~~ll-~lGL~~~~~i~it  202 (203)
                       .+.+..  ....++||+.++|+.|+++|++++|+||++...++.++ .+|+..++..+++
T Consensus        89 ~~~~~~~~~~~~~~~~g~~e~L~~Lk~~g~~l~ivTn~~~~~~~~~l~~~~i~~~f~~i~~  149 (272)
T PRK13223         89 FMEAYADSHELTVVYPGVRDTLKWLKKQGVEMALITNKPERFVAPLLDQMKIGRYFRWIIG  149 (272)
T ss_pred             HHHHHHhcCcCCccCCCHHHHHHHHHHCCCeEEEEECCcHHHHHHHHHHcCcHhhCeEEEe
Confidence             222322  12578999999999999999999999999999999999 9999887776655

>PRK13582 thrH phosphoserine phosphatase; Provisional

Probab=99.50  E-value=2.7e-13  Score=110.72  Aligned_cols=107  Identities=21%  Similarity=0.324  Sum_probs=84.2

Q ss_pred             CcEEEEECCCcccccchHHHHHHHcCCCccHHHHHHHHhCCCCCHHHHHHHHHhccC--C-CHHHHHHHHHhCCCCCCCc
Q 028799           83 ADAVCFDVDSTVCVDEGIDELAEFCGAGKAVAEWTARAMGGSVPFEEALAARLSLFK--P-SLSQVQDFLEKRPPRLSPG  159 (203)
Q Consensus        83 ~kaVIFD~DGTLiDse~~~~la~~~G~~~~~~~~~~~~~gG~~~~~e~l~~~~~~~~--~-~~e~l~~~~~~~~~~l~PG  159 (203)
                      +++|+|||||||++ +.|..+++.+|.+.. .    .+..+...+.+.+..++..+.  + +.+++..+++.  .+++||
T Consensus         1 ~~~v~FD~DGTL~~-~~~~~~~~~~g~~~~-~----~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~~~~--~~~~pg   72 (205)
T PRK13582          1 MEIVCLDLEGVLVP-EIWIAFAEKTGIPEL-R----ATTRDIPDYDVLMKQRLDILDEHGLGLADIQEVIAT--LDPLPG   72 (205)
T ss_pred             CeEEEEeCCCCChh-hHHHHHHHHcCChHH-H----HHhcCCCCHHHHHHHHHHHHHHcCCCHHHHHHHHHh--CCCCCC
Confidence            57899999999996 578788889997542 1    123445677777777666543  2 56667777665  579999


Q ss_pred             HHHHHHHHHHCCCeEEEEcCCCHHHHHHHH-HcCCCccce
Q 028799          160 IDELVKKLKANNKNVYLISGGFRHMINILN-ILKWDVLKV  198 (203)
Q Consensus       160 ~~elL~~Lk~~G~~vaIVTn~~~~~i~~ll-~lGL~~~~~  198 (203)
                      +.++|+.|+++ ++++|+||+++..++.++ ++|++.++.
T Consensus        73 ~~e~L~~L~~~-~~~~IvS~~~~~~~~~~l~~~gl~~~f~  111 (205)
T PRK13582         73 AVEFLDWLRER-FQVVILSDTFYEFAGPLMRQLGWPTLFC  111 (205)
T ss_pred             HHHHHHHHHhc-CCEEEEeCCcHHHHHHHHHHcCCchhhc
Confidence            99999999999 999999999999999999 999986553

>PRK14988 GMP/IMP nucleotidase; Provisional

Probab=99.50  E-value=2.5e-13  Score=113.80  Aligned_cols=119  Identities=16%  Similarity=0.165  Sum_probs=74.3

Q ss_pred             hccCCcEEEEECCCcccccc----hHHH-----HHHHcCCCccHHHHHHHHh------CCCCCH--HHHHHHHHhccCCC
Q 028799           79 LWRTADAVCFDVDSTVCVDE----GIDE-----LAEFCGAGKAVAEWTARAM------GGSVPF--EEALAARLSLFKPS  141 (203)
Q Consensus        79 ~~~~~kaVIFD~DGTLiDse----~~~~-----la~~~G~~~~~~~~~~~~~------gG~~~~--~e~l~~~~~~~~~~  141 (203)
                      .|..+++|||||||||+|+.    .|..     +++.+|.+..  +....+.      ++..+.  .+.+.+..+   ..
T Consensus         6 ~~~~~k~vIFDlDGTL~d~~~~~~~~~~~~~~~~~~~~G~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~   80 (224)
T PRK14988          6 AWQDVDTVLLDMDGTLLDLAFDNYFWQKLVPETLGAQRGISPQ--EAQEYIRQEYHAVQHTLNWYCLDYWSERLG---LD   80 (224)
T ss_pred             CcccCCEEEEcCCCCccchhhhchHHHhhHHHHHHHHhCcCHH--HHHHHHHHHHHHHcCccceecHHHHHHHhC---CC
Confidence            58889999999999999963    1222     2245565421  2221111      100110  011111111   01


Q ss_pred             HHHHHHHHHhCCCCCCCcHHHHHHHHHHCCCeEEEEcCCCHHHHHHHH-HcCCCccceEEecC
Q 028799          142 LSQVQDFLEKRPPRLSPGIDELVKKLKANNKNVYLISGGFRHMINILN-ILKWDVLKVIQITS  203 (203)
Q Consensus       142 ~e~l~~~~~~~~~~l~PG~~elL~~Lk~~G~~vaIVTn~~~~~i~~ll-~lGL~~~~~i~it~  203 (203)
                      .......+. ....++||+.++|+.|+++|++++|+||+.+..++..+ ++|+..++..+++|
T Consensus        81 ~~~~~~~~~-~~~~~~~g~~e~L~~Lk~~g~~~~i~Tn~~~~~~~~~l~~~~l~~~fd~iv~s  142 (224)
T PRK14988         81 ICAMTTEQG-PRAVLREDTVPFLEALKASGKRRILLTNAHPHNLAVKLEHTGLDAHLDLLLST  142 (224)
T ss_pred             HHHHHHHHh-ccCCcCCCHHHHHHHHHhCCCeEEEEeCcCHHHHHHHHHHCCcHHHCCEEEEe
Confidence            111111111 23689999999999999999999999999999999888 99998877766654

>PRK06698 bifunctional 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase/phosphatase; Validated

Probab=99.50  E-value=1.6e-13  Score=126.18  Aligned_cols=121  Identities=20%  Similarity=0.265  Sum_probs=80.5

Q ss_pred             cCCcEEEEECCCcccccch-----HHHHHHHcCC-----CccHHHHHHHHhCCCCCHHHHHHHHHhccCC-CHHH----H
Q 028799           81 RTADAVCFDVDSTVCVDEG-----IDELAEFCGA-----GKAVAEWTARAMGGSVPFEEALAARLSLFKP-SLSQ----V  145 (203)
Q Consensus        81 ~~~kaVIFD~DGTLiDse~-----~~~la~~~G~-----~~~~~~~~~~~~gG~~~~~e~l~~~~~~~~~-~~e~----l  145 (203)
                      .|++++||||||||+||+.     |....+.++.     .....+...+.+|  .+..+.+......... ..++    +
T Consensus       239 ~m~k~vIFDlDGTLiDs~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~G--~~~~~~~~~l~~~~~~~~~~~~~~~~  316 (459)
T PRK06698        239 EMLQALIFDMDGTLFQTDKILELSLDDTFDHLRSLQLWDTVTPIDKYREIMG--VPLPKVWEALLPDHSLEIREQTDAYF  316 (459)
T ss_pred             HhhhheeEccCCceecchhHHHHHHHHHHHHHhhhcccCCCCCHHHHHHHcC--CChHHHHHHHhhhcchhHHHHHHHHH
Confidence            4468999999999999986     3344445431     1111233445555  4555555443322111 1122    2


Q ss_pred             HHHHH----hCCCCCCCcHHHHHHHHHHCCCeEEEEcCCCHHHHHHHH-HcCCCccceEEecC
Q 028799          146 QDFLE----KRPPRLSPGIDELVKKLKANNKNVYLISGGFRHMINILN-ILKWDVLKVIQITS  203 (203)
Q Consensus       146 ~~~~~----~~~~~l~PG~~elL~~Lk~~G~~vaIVTn~~~~~i~~ll-~lGL~~~~~i~it~  203 (203)
                      .+.+.    ....+++||+.++|++|+++|++++|+||+.+..++.++ ++|+..++..++++
T Consensus       317 ~~~~~~~~~~~~~~l~pG~~e~L~~Lk~~g~~l~IvS~~~~~~~~~~l~~~~l~~~f~~i~~~  379 (459)
T PRK06698        317 LERLIENIKSGKGALYPNVKEIFTYIKENNCSIYIASNGLTEYLRAIVSYYDLDQWVTETFSI  379 (459)
T ss_pred             HHHhHHHHhhcCCCcCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHCCcHhhcceeEec
Confidence            22221    224689999999999999999999999999999999999 99998887776653

>PRK10563 6-phosphogluconate phosphatase; Provisional

Probab=99.48  E-value=7.2e-13  Score=109.63  Aligned_cols=116  Identities=15%  Similarity=0.078  Sum_probs=79.7

Q ss_pred             CCcEEEEECCCcccccch-----HHHHHHHcCCCccHHHHHHHHhCCCCCHHHHHHHHHhccC--CCHHHHHHHHH----
Q 028799           82 TADAVCFDVDSTVCVDEG-----IDELAEFCGAGKAVAEWTARAMGGSVPFEEALAARLSLFK--PSLSQVQDFLE----  150 (203)
Q Consensus        82 ~~kaVIFD~DGTLiDse~-----~~~la~~~G~~~~~~~~~~~~~gG~~~~~e~l~~~~~~~~--~~~e~l~~~~~----  150 (203)
                      ++++++||+||||+|++.     +...++.+|......+....+.+  .+..+.+........  .+.+++.+.+.    
T Consensus         3 ~~~~viFD~DGTL~d~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~g--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (221)
T PRK10563          3 QIEAVFFDCDGTLVDSEVICSRAYVTMFAEFGITLSLEEVFKRFKG--VKLYEIIDIISKEHGVTLAKAELEPVYRAEVA   80 (221)
T ss_pred             CCCEEEECCCCCCCCChHHHHHHHHHHHHHcCCCCCHHHHHHHhcC--CCHHHHHHHHHHHhCCCCCHHHHHHHHHHHHH
Confidence            578999999999999865     34556678876443444455444  555555544333222  13344333221    


Q ss_pred             ---hCCCCCCCcHHHHHHHHHHCCCeEEEEcCCCHHHHHHHH-HcCCCccce-EEec
Q 028799          151 ---KRPPRLSPGIDELVKKLKANNKNVYLISGGFRHMINILN-ILKWDVLKV-IQIT  202 (203)
Q Consensus       151 ---~~~~~l~PG~~elL~~Lk~~G~~vaIVTn~~~~~i~~ll-~lGL~~~~~-i~it  202 (203)
                         .....++||+.++|+.|   +++++|+||+....++..+ .+|+..++. ++++
T Consensus        81 ~~~~~~~~~~~gv~~~L~~L---~~~~~ivTn~~~~~~~~~l~~~~l~~~F~~~v~~  134 (221)
T PRK10563         81 RLFDSELEPIAGANALLESI---TVPMCVVSNGPVSKMQHSLGKTGMLHYFPDKLFS  134 (221)
T ss_pred             HHHHccCCcCCCHHHHHHHc---CCCEEEEeCCcHHHHHHHHHhcChHHhCcceEee
Confidence               12478999999999998   4899999999999999999 999988774 5544

>TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253

Probab=99.47  E-value=7e-13  Score=109.32  Aligned_cols=50  Identities=20%  Similarity=0.153  Sum_probs=45.0

Q ss_pred             CCCCCcHHHHHHHHHHCCCeEEEEcCCCHHHHHHHH-HcCCCccceEEecC
Q 028799          154 PRLSPGIDELVKKLKANNKNVYLISGGFRHMINILN-ILKWDVLKVIQITS  203 (203)
Q Consensus       154 ~~l~PG~~elL~~Lk~~G~~vaIVTn~~~~~i~~ll-~lGL~~~~~i~it~  203 (203)
                      ..++||+.++|+.|+++|++++|+||+....+...+ .+|+..++..++++
T Consensus        93 ~~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~l~~~~l~~~f~~i~~~  143 (221)
T TIGR02253        93 LRVYPGVRDTLMELRESGYRLGIITDGLPVKQWEKLERLGVRDFFDAVITS  143 (221)
T ss_pred             CCCCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHhCChHHhccEEEEe
Confidence            689999999999999999999999999998888888 99998877766653

This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549).

>TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein

Probab=99.47  E-value=4.7e-13  Score=109.70  Aligned_cols=113  Identities=20%  Similarity=0.186  Sum_probs=75.6

Q ss_pred             EEEECCCcccccch-----HHHHHHH-cCCCccHHHHHHHHhCCCCCHHHHHHHHHhccCCC-HHHH-HHHHH-hCCCCC
Q 028799           86 VCFDVDSTVCVDEG-----IDELAEF-CGAGKAVAEWTARAMGGSVPFEEALAARLSLFKPS-LSQV-QDFLE-KRPPRL  156 (203)
Q Consensus        86 VIFD~DGTLiDse~-----~~~la~~-~G~~~~~~~~~~~~~gG~~~~~e~l~~~~~~~~~~-~e~l-~~~~~-~~~~~l  156 (203)
                      ++|||||||+||..     +....+. +|.+....+...+.++  .+..+.+.. ++. ... .+.+ ...++ ....++
T Consensus         1 iiFDlDGTL~Ds~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g--~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~   76 (205)
T TIGR01454         1 VVFDLDGVLVDSFAVMREAFAIAYREVVGDGPAPFEEYRRHLG--RYFPDIMRI-MGL-PLEMEEPFVRESYRLAGEVEV   76 (205)
T ss_pred             CeecCcCccccCHHHHHHHHHHHHHHhcCCCCCCHHHHHHHhC--ccHHHHHHH-cCC-CHHHHHHHHHHHHHhhccccc
Confidence            68999999999975     3334444 4654322344455555  344444432 221 111 1111 12222 124789


Q ss_pred             CCcHHHHHHHHHHCCCeEEEEcCCCHHHHHHHH-HcCCCccceEEec
Q 028799          157 SPGIDELVKKLKANNKNVYLISGGFRHMINILN-ILKWDVLKVIQIT  202 (203)
Q Consensus       157 ~PG~~elL~~Lk~~G~~vaIVTn~~~~~i~~ll-~lGL~~~~~i~it  202 (203)
                      +||+.++|++|+++|++++|+||+....++..+ ++|+..++..+++
T Consensus        77 ~~g~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~~l~~~f~~i~~  123 (205)
T TIGR01454        77 FPGVPELLAELRADGVGTAIATGKSGPRARSLLEALGLLPLFDHVIG  123 (205)
T ss_pred             CCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHcCChhheeeEEe
Confidence            999999999999999999999999999999999 9999887776665

The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity.

>TIGR01990 bPGM beta-phosphoglucomutase

Probab=99.47  E-value=9.7e-13  Score=105.35  Aligned_cols=114  Identities=25%  Similarity=0.271  Sum_probs=75.0

Q ss_pred             EEEEECCCcccccch-----HHHHHHHcCCCccHHHHHHHHhCCCCCHHHHHHHHHhccC-C-CHHHH-------HHHHH
Q 028799           85 AVCFDVDSTVCVDEG-----IDELAEFCGAGKAVAEWTARAMGGSVPFEEALAARLSLFK-P-SLSQV-------QDFLE  150 (203)
Q Consensus        85 aVIFD~DGTLiDse~-----~~~la~~~G~~~~~~~~~~~~~gG~~~~~e~l~~~~~~~~-~-~~e~l-------~~~~~  150 (203)
                      +++||+||||+|++.     +..+++.+|.+.. .+......+  .+..+.+...+.... . +.+.+       .+.+.
T Consensus         1 ~iiFD~DGTL~ds~~~~~~~~~~~~~~~g~~~~-~~~~~~~~g--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   77 (185)
T TIGR01990         1 AVIFDLDGVITDTAEYHYLAWKALADELGIPFD-EEFNESLKG--VSREDSLERILDLGGKKYSEEEKEELAERKNDYYV   77 (185)
T ss_pred             CeEEcCCCccccChHHHHHHHHHHHHHcCCCCC-HHHHHHhcC--CChHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHH
Confidence            589999999999985     4556677887643 233334443  444555544433221 1 22211       11222


Q ss_pred             ----h-CCCCCCCcHHHHHHHHHHCCCeEEEEcCCCHHHHHHHH-HcCCCccceEEecC
Q 028799          151 ----K-RPPRLSPGIDELVKKLKANNKNVYLISGGFRHMINILN-ILKWDVLKVIQITS  203 (203)
Q Consensus       151 ----~-~~~~l~PG~~elL~~Lk~~G~~vaIVTn~~~~~i~~ll-~lGL~~~~~i~it~  203 (203)
                          . ....++||+.++|++|+++|++++|+||+..  ...++ .+|+..++...+++
T Consensus        78 ~~~~~~~~~~~~pg~~~~L~~L~~~g~~~~i~s~~~~--~~~~l~~~~l~~~f~~~~~~  134 (185)
T TIGR01990        78 ELLKELTPADVLPGIKNLLDDLKKNNIKIALASASKN--APTVLEKLGLIDYFDAIVDP  134 (185)
T ss_pred             HHHHhcCCcccCccHHHHHHHHHHCCCeEEEEeCCcc--HHHHHHhcCcHhhCcEEEeh
Confidence                1 1347899999999999999999999999754  35677 99998888777654

The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state.

>TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II

Probab=99.45  E-value=2e-12  Score=105.32  Aligned_cols=121  Identities=20%  Similarity=0.161  Sum_probs=75.2

Q ss_pred             CcEEEEECCCcccccchHHHH-HHHcCCC-ccH---------HHHHHHHhCCCC-CHHHHHHHH----HhccCC--CHHH
Q 028799           83 ADAVCFDVDSTVCVDEGIDEL-AEFCGAG-KAV---------AEWTARAMGGSV-PFEEALAAR----LSLFKP--SLSQ  144 (203)
Q Consensus        83 ~kaVIFD~DGTLiDse~~~~l-a~~~G~~-~~~---------~~~~~~~~gG~~-~~~e~l~~~----~~~~~~--~~e~  144 (203)
                      +++|+||+||||+|++..... .+.++.. ...         .........|.. ++.+...+.    +..+..  ..+.
T Consensus         1 ik~viFD~dgTLiD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~   80 (198)
T TIGR01428         1 IKALVFDVYGTLFDVHSVVERFAELYGGRGEALSQLWRQKQLEYSWLRTLMGPYADFWDLTREALRYLLGRLGLEDDESA   80 (198)
T ss_pred             CcEEEEeCCCcCccHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHccCCCcCHHHHHHHHHHHHHHHcCCCCCHHH
Confidence            478999999999999874332 2333221 000         011111223332 444332222    222211  2223


Q ss_pred             HHHHHHh-CCCCCCCcHHHHHHHHHHCCCeEEEEcCCCHHHHHHHH-HcCCCccceEEecC
Q 028799          145 VQDFLEK-RPPRLSPGIDELVKKLKANNKNVYLISGGFRHMINILN-ILKWDVLKVIQITS  203 (203)
Q Consensus       145 l~~~~~~-~~~~l~PG~~elL~~Lk~~G~~vaIVTn~~~~~i~~ll-~lGL~~~~~i~it~  203 (203)
                      ...+.+. ...+++||+.++|+.|+++|++++|+||++...++..+ .+|+..++..+++|
T Consensus        81 ~~~~~~~~~~~~~~~~~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~gl~~~fd~i~~s  141 (198)
T TIGR01428        81 ADRLAEAYLRLPPHPDVPAGLRALKERGYRLAILSNGSPAMLKSLVKHAGLDDPFDAVLSA  141 (198)
T ss_pred             HHHHHHHHhcCCCCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHCCChhhhheeEeh
Confidence            3333321 13689999999999999999999999999999999999 99998877777664

Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related.

>PLN02940 riboflavin kinase

Probab=99.45  E-value=1.2e-12  Score=118.02  Aligned_cols=120  Identities=19%  Similarity=0.211  Sum_probs=82.3

Q ss_pred             cCCcEEEEECCCcccccch-----HHHHHHHcCCCccHHHHHHHHhCCCCCHHHHHHHHHhccC--CCHHH----HHHHH
Q 028799           81 RTADAVCFDVDSTVCVDEG-----IDELAEFCGAGKAVAEWTARAMGGSVPFEEALAARLSLFK--PSLSQ----VQDFL  149 (203)
Q Consensus        81 ~~~kaVIFD~DGTLiDse~-----~~~la~~~G~~~~~~~~~~~~~gG~~~~~e~l~~~~~~~~--~~~e~----l~~~~  149 (203)
                      .++++|+|||||||+|++.     +..+++.+|..... +.....+|  .+..+.+...+....  ...++    +.+.+
T Consensus         9 ~~ik~VIFDlDGTLvDt~~~~~~a~~~~~~~~G~~~~~-~~~~~~~G--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (382)
T PLN02940          9 KLVSHVILDLDGTLLNTDGIVSDVLKAFLVKYGKQWDG-REAQKIVG--KTPLEAAATVVEDYGLPCSTDEFNSEITPLL   85 (382)
T ss_pred             ccCCEEEECCcCcCCcCHHHHHHHHHHHHHHcCCCCCH-HHHHHhcC--CCHHHHHHHHHHHhCCCCCHHHHHHHHHHHH
Confidence            3488999999999999976     34556677875443 33445555  344444444333221  12222    22222


Q ss_pred             Hh--CCCCCCCcHHHHHHHHHHCCCeEEEEcCCCHHHHHHHH--HcCCCccceEEecC
Q 028799          150 EK--RPPRLSPGIDELVKKLKANNKNVYLISGGFRHMINILN--ILKWDVLKVIQITS  203 (203)
Q Consensus       150 ~~--~~~~l~PG~~elL~~Lk~~G~~vaIVTn~~~~~i~~ll--~lGL~~~~~i~it~  203 (203)
                      .+  ....++||+.++|+.|+++|++++|+||+++..++..+  ++|+..++..++++
T Consensus        86 ~~~~~~~~l~pGv~elL~~Lk~~g~~l~IvTn~~~~~~~~~l~~~~gl~~~Fd~ii~~  143 (382)
T PLN02940         86 SEQWCNIKALPGANRLIKHLKSHGVPMALASNSPRANIEAKISCHQGWKESFSVIVGG  143 (382)
T ss_pred             HHHHccCCCCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHhccChHhhCCEEEeh
Confidence            21  24689999999999999999999999999999888766  58998888877764

>PRK09449 dUMP phosphatase; Provisional

Probab=99.44  E-value=2e-12  Score=107.11  Aligned_cols=120  Identities=14%  Similarity=0.178  Sum_probs=75.8

Q ss_pred             CCcEEEEECCCcccccch---HHHHHHHcCCCccHHHH----------HHHHhCCCCCHHHHHHHH----HhccCCCHHH
Q 028799           82 TADAVCFDVDSTVCVDEG---IDELAEFCGAGKAVAEW----------TARAMGGSVPFEEALAAR----LSLFKPSLSQ  144 (203)
Q Consensus        82 ~~kaVIFD~DGTLiDse~---~~~la~~~G~~~~~~~~----------~~~~~gG~~~~~e~l~~~----~~~~~~~~e~  144 (203)
                      ++++|+|||||||+|.+.   +..+++.+|........          +..+..|..+..+....+    ...+..+.++
T Consensus         2 ~~k~iiFDlDGTLid~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (224)
T PRK09449          2 KYDWILFDADETLFHFDAFAGLQRMFSRYGVDFTAEDFQDYQAVNKPLWVDYQNGAITALQLQHTRFESWAEKLNVTPGE   81 (224)
T ss_pred             CccEEEEcCCCchhcchhhHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHcCCCHHH
Confidence            578999999999998553   33455667765321111          111112223333222111    1111112233


Q ss_pred             HHHH----HHhCCCCCCCcHHHHHHHHHHCCCeEEEEcCCCHHHHHHHH-HcCCCccceEEecC
Q 028799          145 VQDF----LEKRPPRLSPGIDELVKKLKANNKNVYLISGGFRHMINILN-ILKWDVLKVIQITS  203 (203)
Q Consensus       145 l~~~----~~~~~~~l~PG~~elL~~Lk~~G~~vaIVTn~~~~~i~~ll-~lGL~~~~~i~it~  203 (203)
                      +.+.    +.. ...++||+.++|+.|+ +|++++|+||++...++..+ ++|+..++..+++|
T Consensus        82 ~~~~~~~~~~~-~~~~~~g~~~~L~~L~-~~~~~~i~Tn~~~~~~~~~l~~~~l~~~fd~v~~~  143 (224)
T PRK09449         82 LNSAFLNAMAE-ICTPLPGAVELLNALR-GKVKMGIITNGFTELQQVRLERTGLRDYFDLLVIS  143 (224)
T ss_pred             HHHHHHHHHhh-cCccCccHHHHHHHHH-hCCeEEEEeCCcHHHHHHHHHhCChHHHcCEEEEE
Confidence            3222    222 3679999999999999 68999999999999999988 99998888777764

>TIGR02252 DREG-2 REG-2-like, HAD superfamily (subfamily IA) hydrolase

Probab=99.42  E-value=2.3e-12  Score=105.18  Aligned_cols=119  Identities=17%  Similarity=0.126  Sum_probs=73.4

Q ss_pred             cEEEEECCCcccccch-----HHHHHHHcCCCccHHHHHHH----H---------hC-C-CCCHHH----HHHHHHhccC
Q 028799           84 DAVCFDVDSTVCVDEG-----IDELAEFCGAGKAVAEWTAR----A---------MG-G-SVPFEE----ALAARLSLFK  139 (203)
Q Consensus        84 kaVIFD~DGTLiDse~-----~~~la~~~G~~~~~~~~~~~----~---------~g-G-~~~~~e----~l~~~~~~~~  139 (203)
                      ++|+|||||||+|++.     +..+++.+|.+....+....    +         .+ . ..+..+    .+...+....
T Consensus         1 k~viFDlDGTL~d~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~   80 (203)
T TIGR02252         1 KLITFDAVGTLLALKEPVGEVYCEIARKYGVEVSPDELEQAFRRAFKAMSEAFPNFGFSSGLTPQQWWQKLVRDTFGRAG   80 (203)
T ss_pred             CeEEEecCCceeeeCCCHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhhCCCCCCCCCCCHHHHHHHHHHHHHHhcC
Confidence            5899999999999864     44566678876432221111    1         00 0 133322    2222222211


Q ss_pred             -CCH----HHHHHHHHh----CCCCCCCcHHHHHHHHHHCCCeEEEEcCCCHHHHHHHH-HcCCCccceEEecC
Q 028799          140 -PSL----SQVQDFLEK----RPPRLSPGIDELVKKLKANNKNVYLISGGFRHMINILN-ILKWDVLKVIQITS  203 (203)
Q Consensus       140 -~~~----e~l~~~~~~----~~~~l~PG~~elL~~Lk~~G~~vaIVTn~~~~~i~~ll-~lGL~~~~~i~it~  203 (203)
                       ...    +.+.++++.    ....++||+.++|+.|+++|++++|+||+... ++..+ .+|+..++..+++|
T Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~-~~~~l~~~~l~~~fd~i~~s  153 (203)
T TIGR02252        81 VPDPESFEKIFEELYSYFATPEPWQVYPDAIKLLKDLRERGLILGVISNFDSR-LRGLLEALGLLEYFDFVVTS  153 (203)
T ss_pred             CCCchhHHHHHHHHHHHhcCCCcceeCcCHHHHHHHHHHCCCEEEEEeCCchh-HHHHHHHCCcHHhcceEEee
Confidence             111    122333321    13478999999999999999999999999875 46777 99998877766654

Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes.

>TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548

Probab=99.41  E-value=2.4e-12  Score=105.05  Aligned_cols=119  Identities=17%  Similarity=0.161  Sum_probs=73.9

Q ss_pred             EEEEECCCcccccch-----HHHHHHHcCCCccHHHHHHHHhC-CCC--CH---HHHHHHHHhcc-------CCCHHHH-
Q 028799           85 AVCFDVDSTVCVDEG-----IDELAEFCGAGKAVAEWTARAMG-GSV--PF---EEALAARLSLF-------KPSLSQV-  145 (203)
Q Consensus        85 aVIFD~DGTLiDse~-----~~~la~~~G~~~~~~~~~~~~~g-G~~--~~---~e~l~~~~~~~-------~~~~e~l-  145 (203)
                      +|+|||||||+||+.     +...++.+|......+...++++ |..  .+   ...+.+.+...       ....+.+ 
T Consensus         2 ~viFD~DGTLiDs~~~~~~a~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (197)
T TIGR01548         2 ALVLDMDGVMADVSQSYRRAIIDTVEHFGGVSVTHADIDHTKLAGNANNDWQLTHRLVVDGLNSASSERVRDAPTLEAVT   81 (197)
T ss_pred             ceEEecCceEEechHHHHHHHHHHHHHHcCCCCCHHHHHHHHHccCccCchHHHHHHHHHhhhcccchhccCCccHHHHH
Confidence            689999999999986     34555667643222333444443 111  11   11121222110       0122333 


Q ss_pred             ---HHHHHhC------------CCCCCCcHHHHHHHHHHCCCeEEEEcCCCHHHHHHHH-HcCCCccceEEecC
Q 028799          146 ---QDFLEKR------------PPRLSPGIDELVKKLKANNKNVYLISGGFRHMINILN-ILKWDVLKVIQITS  203 (203)
Q Consensus       146 ---~~~~~~~------------~~~l~PG~~elL~~Lk~~G~~vaIVTn~~~~~i~~ll-~lGL~~~~~i~it~  203 (203)
                         ++++...            ...+.|++.++|+.|+++|++++|+||+++..++.++ .+|+..++...+++
T Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~f~~~~~~  155 (197)
T TIGR01548        82 AQFQALYQGVGYYRDLATLGLIEDETLLTPKGLLRELHRAPKGMAVVTGRPRKDAAKFLTTHGLEILFPVQIWM  155 (197)
T ss_pred             HHHHHHHcCCcccccccchhhhccccccCHHHHHHHHHHcCCcEEEECCCCHHHHHHHHHHcCchhhCCEEEee
Confidence               3333321            1245556699999999999999999999999999999 99999888777653

All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's.

>COG4359 Uncharacterized conserved protein [Function unknown]

Probab=99.40  E-value=6e-12  Score=102.43  Aligned_cols=119  Identities=23%  Similarity=0.417  Sum_probs=100.1

Q ss_pred             CcEEEE-ECCCcccccchHHHHHHHcCCCccHHHHHHHHhCCCCCHHHHHHHHHhccCCCHHHHHHHHHhCCCCCCCcHH
Q 028799           83 ADAVCF-DVDSTVCVDEGIDELAEFCGAGKAVAEWTARAMGGSVPFEEALAARLSLFKPSLSQVQDFLEKRPPRLSPGID  161 (203)
Q Consensus        83 ~kaVIF-D~DGTLiDse~~~~la~~~G~~~~~~~~~~~~~gG~~~~~e~l~~~~~~~~~~~e~l~~~~~~~~~~l~PG~~  161 (203)
                      .+.++| |||||++-.+..+.+-..+|.++. .++...++.+.+++.+.+.++++..+.+.+++.+.+.+ .+.+.||++
T Consensus         2 kk~vi~sDFDGTITl~Ds~~~itdtf~~~e~-k~l~~~vls~tiS~rd~~g~mf~~i~~s~~Eile~llk-~i~Idp~fK   79 (220)
T COG4359           2 KKPVIFSDFDGTITLNDSNDYITDTFGPGEW-KALKDGVLSKTISFRDGFGRMFGSIHSSLEEILEFLLK-DIKIDPGFK   79 (220)
T ss_pred             CceEEEecCCCceEecchhHHHHhccCchHH-HHHHHHHhhCceeHHHHHHHHHHhcCCCHHHHHHHHHh-hcccCccHH
Confidence            345665 999999999999999999998754 47888888999999999999998876677777777666 379999999


Q ss_pred             HHHHHHHHCCCeEEEEcCCCHHHHHHHH--HcCCCccceEEecC
Q 028799          162 ELVKKLKANNKNVYLISGGFRHMINILN--ILKWDVLKVIQITS  203 (203)
Q Consensus       162 elL~~Lk~~G~~vaIVTn~~~~~i~~ll--~lGL~~~~~i~it~  203 (203)
                      ++++++++++++++|+|+|...++.+++  ..|-+....+.|.|
T Consensus        80 ef~e~ike~di~fiVvSsGm~~fI~~lfe~ivgke~i~~idi~s  123 (220)
T COG4359          80 EFVEWIKEHDIPFIVVSSGMDPFIYPLFEGIVGKERIYCIDIVS  123 (220)
T ss_pred             HHHHHHHHcCCCEEEEeCCCchHHHHHHHhhccccceeeeEEee
Confidence            9999999999999999999999999998  45556666666654

>TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254

Probab=99.38  E-value=9.2e-12  Score=102.41  Aligned_cols=120  Identities=17%  Similarity=0.127  Sum_probs=77.2

Q ss_pred             CcEEEEECCCcccccch-----HHHHHHHcCCCccHH----------HHHHHHhCCCCCHHHHHHH----HHhccCC--C
Q 028799           83 ADAVCFDVDSTVCVDEG-----IDELAEFCGAGKAVA----------EWTARAMGGSVPFEEALAA----RLSLFKP--S  141 (203)
Q Consensus        83 ~kaVIFD~DGTLiDse~-----~~~la~~~G~~~~~~----------~~~~~~~gG~~~~~e~l~~----~~~~~~~--~  141 (203)
                      +++|+|||||||+|+..     +..+.+.+|......          .++..+..|..+..+....    .+.....  .
T Consensus         1 ~k~viFD~DGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (224)
T TIGR02254         1 YKTLLFDLDDTILDFQAAEALALRLLFEDQGIPLTEDMFAQYKEINQGLWRAYEEGKITKDEVVNTRFSALLKEYNTEAD   80 (224)
T ss_pred             CCEEEEcCcCcccccchHHHHHHHHHHHHhCCCccHHHHHHHHHHhHHHHHHHHcCCCCHHHHHHHHHHHHHHHhCCCCc
Confidence            57999999999999876     334445667642111          1122233344444332211    1211111  1


Q ss_pred             HHHHHHHHHh---CCCCCCCcHHHHHHHHHHCCCeEEEEcCCCHHHHHHHH-HcCCCccceEEecC
Q 028799          142 LSQVQDFLEK---RPPRLSPGIDELVKKLKANNKNVYLISGGFRHMINILN-ILKWDVLKVIQITS  203 (203)
Q Consensus       142 ~e~l~~~~~~---~~~~l~PG~~elL~~Lk~~G~~vaIVTn~~~~~i~~ll-~lGL~~~~~i~it~  203 (203)
                      .+.+.+.+..   ...+++||+.++|++|+++ ++++|+||++...++..+ .+|+..++..+++|
T Consensus        81 ~~~~~~~~~~~~~~~~~~~~g~~~~L~~l~~~-~~~~i~Sn~~~~~~~~~l~~~~l~~~fd~i~~~  145 (224)
T TIGR02254        81 EALLNQKYLRFLEEGHQLLPGAFELMENLQQK-FRLYIVTNGVRETQYKRLRKSGLFPFFDDIFVS  145 (224)
T ss_pred             HHHHHHHHHHHHhccCeeCccHHHHHHHHHhc-CcEEEEeCCchHHHHHHHHHCCcHhhcCEEEEc
Confidence            2223332221   1368999999999999999 999999999999999999 99998888777654

This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases.

>PRK11590 hypothetical protein; Provisional

Probab=99.34  E-value=1.5e-11  Score=102.04  Aligned_cols=109  Identities=18%  Similarity=0.212  Sum_probs=67.9

Q ss_pred             CCcEEEEECCCcccccchHH---HHH-HHcCCCccHHHHHHHHhCCCCCHHHHHHH-H-------HhccCC-CHHHHH--
Q 028799           82 TADAVCFDVDSTVCVDEGID---ELA-EFCGAGKAVAEWTARAMGGSVPFEEALAA-R-------LSLFKP-SLSQVQ--  146 (203)
Q Consensus        82 ~~kaVIFD~DGTLiDse~~~---~la-~~~G~~~~~~~~~~~~~gG~~~~~e~l~~-~-------~~~~~~-~~e~l~--  146 (203)
                      ..++++|||||||++.+...   ..+ +++|............++  ......... .       .....+ +.++++  
T Consensus         5 ~~k~~iFD~DGTL~~~d~~~~~~~~~~~~~g~~~~~~~~~~~~ig--~~l~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~   82 (211)
T PRK11590          5 ERRVVFFDLDGTLHQQDMFGSFLRYLLRRQPLNLLLVLPLLPVIG--LGLLVKGRAARWPMSLLLWGCTFGHSEARLQAL   82 (211)
T ss_pred             cceEEEEecCCCCcccchHHHHHHHHHHhcchhhHHHhHHHHHhc--cCcccchhhhhhhHHHHHHHHHcCCCHHHHHHH
Confidence            45799999999999877533   333 566755332233333344  111111111 0       001112 333322  


Q ss_pred             --HH---HHhCCCCCCCcHHHHH-HHHHHCCCeEEEEcCCCHHHHHHHH-HcCC
Q 028799          147 --DF---LEKRPPRLSPGIDELV-KKLKANNKNVYLISGGFRHMINILN-ILKW  193 (203)
Q Consensus       147 --~~---~~~~~~~l~PG~~elL-~~Lk~~G~~vaIVTn~~~~~i~~ll-~lGL  193 (203)
                        ++   +.+. ..++||+.++| +.++++|++++||||+++..+++++ .+|+
T Consensus        83 ~~~f~~~~~~~-~~~~pga~e~L~~~l~~~G~~l~IvSas~~~~~~~il~~l~~  135 (211)
T PRK11590         83 EADFVRWFRDN-VTAFPVVQERLTTYLLSSDADVWLITGSPQPLVEQVYFDTPW  135 (211)
T ss_pred             HHHHHHHHHHh-CcCCccHHHHHHHHHHhCCCEEEEEeCCcHHHHHHHHHHccc
Confidence              22   3332 57799999999 5788899999999999999999999 9885

>PF06888 Put_Phosphatase: Putative Phosphatase; InterPro: IPR016965 This group represents phosphatases related to PHOSPHO1 and PHOSPHO2 []

Probab=99.33  E-value=1.7e-11  Score=104.04  Aligned_cols=114  Identities=20%  Similarity=0.229  Sum_probs=88.4

Q ss_pred             EEEEECCCcccccchHHHHHHHcCCCccHHHHHHHHhCCCCCHHHHHHHHHhccC--C-CHHHHHHHHHhCCCCCCCcHH
Q 028799           85 AVCFDVDSTVCVDEGIDELAEFCGAGKAVAEWTARAMGGSVPFEEALAARLSLFK--P-SLSQVQDFLEKRPPRLSPGID  161 (203)
Q Consensus        85 aVIFD~DGTLiDse~~~~la~~~G~~~~~~~~~~~~~gG~~~~~e~l~~~~~~~~--~-~~e~l~~~~~~~~~~l~PG~~  161 (203)
                      .++||||+||+|.++...+.+.++......++...+-.+  .+.+.+...+..+.  + +.+++.+.++.  +++.||+.
T Consensus         2 LvvfDFD~TIvd~dsd~~v~~~l~~~~~~~~l~~~~~~~--~wt~~m~~vl~~L~~~gvt~~~I~~~l~~--ip~~pgm~   77 (234)
T PF06888_consen    2 LVVFDFDHTIVDQDSDDWVIELLPPEELPEELRESYPKG--GWTEYMDRVLQLLHEQGVTPEDIRDALRS--IPIDPGMK   77 (234)
T ss_pred             EEEEeCCCCccCCccHHHHHHhcCCcccHHHHHHhcccc--chHHHHHHHHHHHHHcCCCHHHHHHHHHc--CCCCccHH
Confidence            589999999999999999999988664434444443322  34455555554442  3 68888888876  68999999


Q ss_pred             HHHHHH--HHCCCeEEEEcCCCHHHHHHHH-HcCCCccceEEec
Q 028799          162 ELVKKL--KANNKNVYLISGGFRHMINILN-ILKWDVLKVIQIT  202 (203)
Q Consensus       162 elL~~L--k~~G~~vaIVTn~~~~~i~~ll-~lGL~~~~~i~it  202 (203)
                      ++++.+  +..|+.++|+|++...+++.++ +.|+...+.-++|
T Consensus        78 ~~l~~l~~~~~~~~~~IiSDaNs~fI~~iL~~~gl~~~f~~I~T  121 (234)
T PF06888_consen   78 ELLRFLAKNQRGFDLIIISDANSFFIETILEHHGLRDCFSEIFT  121 (234)
T ss_pred             HHHHHHHhcCCCceEEEEeCCcHhHHHHHHHhCCCccccceEEe
Confidence            999999  5579999999999999999999 9999887655544

It includes plant phosphatases with homology to the haloacid dehalogenase (HAD) superfamily [, ]. PHOSPHO1 is a phosphoethanolamine/phosphocholine phosphatase [], while PHOSPHO2 has high activity toward pyridoxal 5'-phosphate (PLP), and it is active at much lower level toward pyrophosphate, phosphoethanolamine (PEA)and phosphocholine (PCho) []. ; GO: 0016791 phosphatase activity

>PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A

Probab=99.31  E-value=3.9e-12  Score=99.21  Aligned_cols=115  Identities=26%  Similarity=0.314  Sum_probs=76.3

Q ss_pred             EEEECCCcccccch-----HHH-HHHHcCCCccHHHHHHHHhCCCCCHHHHHHHHHhccCCCHHH----HHHHHHhCCCC
Q 028799           86 VCFDVDSTVCVDEG-----IDE-LAEFCGAGKAVAEWTARAMGGSVPFEEALAARLSLFKPSLSQ----VQDFLEKRPPR  155 (203)
Q Consensus        86 VIFD~DGTLiDse~-----~~~-la~~~G~~~~~~~~~~~~~gG~~~~~e~l~~~~~~~~~~~e~----l~~~~~~~~~~  155 (203)
                      |+||+||||+|++.     +.. +.+.+|.... .+...+..+  .+..+.+...+.........    +.++......+
T Consensus         1 iifD~dgtL~d~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   77 (176)
T PF13419_consen    1 IIFDLDGTLVDTDPAIFRALQRLALEEFGLEIS-AEELRELFG--KSYEEALERLLERFGIDPEEIQELFREYNLESKLQ   77 (176)
T ss_dssp             EEEESBTTTEEHHHHHHHHHHHHHHHHTTHHHH-HHHHHHHTT--SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHGGEE
T ss_pred             cEEECCCCcEeCHHHHHHHHHHHHHHHhCCCCC-HHHHHHHhC--CCHHHHHHHhhhccchhHHHHHHHhhhhhhhhccc
Confidence            79999999999876     222 3445665422 222333333  45555555444322111222    22332123478


Q ss_pred             CCCcHHHHHHHHHHCCCeEEEEcCCCHHHHHHHH-HcCCCccceEEecC
Q 028799          156 LSPGIDELVKKLKANNKNVYLISGGFRHMINILN-ILKWDVLKVIQITS  203 (203)
Q Consensus       156 l~PG~~elL~~Lk~~G~~vaIVTn~~~~~i~~ll-~lGL~~~~~i~it~  203 (203)
                      ++||+.++|+.|+++|++++++||++...++..+ .+|+..++.-+++|
T Consensus        78 ~~~~~~~~L~~l~~~~~~~~i~Sn~~~~~~~~~l~~~~~~~~f~~i~~~  126 (176)
T PF13419_consen   78 PYPGVRELLERLKAKGIPLVIVSNGSRERIERVLERLGLDDYFDEIISS  126 (176)
T ss_dssp             ESTTHHHHHHHHHHTTSEEEEEESSEHHHHHHHHHHTTHGGGCSEEEEG
T ss_pred             hhhhhhhhhhhcccccceeEEeecCCccccccccccccccccccccccc
Confidence            9999999999999999999999999999999999 99998777665543

...

>PLN02919 haloacid dehalogenase-like hydrolase family protein

Probab=99.30  E-value=2.2e-11  Score=122.09  Aligned_cols=122  Identities=20%  Similarity=0.168  Sum_probs=82.4

Q ss_pred             hhccCCcEEEEECCCcccccch-----HHHHHHHcCCCccHHHHHHHHhCCCCCHHHHHHHHHhcc--CC-CHH----HH
Q 028799           78 QLWRTADAVCFDVDSTVCVDEG-----IDELAEFCGAGKAVAEWTARAMGGSVPFEEALAARLSLF--KP-SLS----QV  145 (203)
Q Consensus        78 ~~~~~~kaVIFD~DGTLiDse~-----~~~la~~~G~~~~~~~~~~~~~gG~~~~~e~l~~~~~~~--~~-~~e----~l  145 (203)
                      ..|+.+++|+|||||||+|++.     +..+++.+|.+... +.....++  .+..+.+.......  .+ +.+    ++
T Consensus        70 ~~~~~ikaVIFDlDGTLiDS~~~~~~a~~~~~~~~G~~it~-e~~~~~~G--~~~~~~~~~~~~~~~l~~~~~~~~~~~~  146 (1057)
T PLN02919         70 EEWGKVSAVLFDMDGVLCNSEEPSRRAAVDVFAEMGVEVTV-EDFVPFMG--TGEANFLGGVASVKGVKGFDPDAAKKRF  146 (1057)
T ss_pred             CcCCCCCEEEECCCCCeEeChHHHHHHHHHHHHHcCCCCCH-HHHHHHhC--CCHHHHHHHHHHhcCCCCCCHHHHHHHH
Confidence            4588899999999999999976     34555678876433 33344555  44444443322211  11 211    12


Q ss_pred             HHHHH-h----CCCCCCCcHHHHHHHHHHCCCeEEEEcCCCHHHHHHHH-HcCCC-ccceEEec
Q 028799          146 QDFLE-K----RPPRLSPGIDELVKKLKANNKNVYLISGGFRHMINILN-ILKWD-VLKVIQIT  202 (203)
Q Consensus       146 ~~~~~-~----~~~~l~PG~~elL~~Lk~~G~~vaIVTn~~~~~i~~ll-~lGL~-~~~~i~it  202 (203)
                      .+.+. .    ....++||+.++|++|+++|++++|+||+....++..+ ++|+. .++..+++
T Consensus       147 ~~~~~~~~~~~~~~~~~pG~~elL~~Lk~~G~~l~IvSn~~~~~~~~~L~~~gl~~~~Fd~iv~  210 (1057)
T PLN02919        147 FEIYLEKYAKPNSGIGFPGALELITQCKNKGLKVAVASSADRIKVDANLAAAGLPLSMFDAIVS  210 (1057)
T ss_pred             HHHHHHHhhhcccCccCccHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHcCCChhHCCEEEE
Confidence            22221 1    12347999999999999999999999999999999999 99996 56666654

>TIGR02247 HAD-1A3-hyp Epoxide hydrolase N-terminal domain-like phosphatase

Probab=99.29  E-value=1.1e-11  Score=101.77  Aligned_cols=51  Identities=18%  Similarity=0.096  Sum_probs=38.7

Q ss_pred             CCCCCCcHHHHHHHHHHCCCeEEEEcCCCHHH--HHHHH-HcCCCccceEEecC
Q 028799          153 PPRLSPGIDELVKKLKANNKNVYLISGGFRHM--INILN-ILKWDVLKVIQITS  203 (203)
Q Consensus       153 ~~~l~PG~~elL~~Lk~~G~~vaIVTn~~~~~--i~~ll-~lGL~~~~~i~it~  203 (203)
                      ..+++||+.++|+.|+++|++++|+||++...  ....+ .+++..++..+++|
T Consensus        92 ~~~~~~~~~~~L~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~l~~~fd~v~~s  145 (211)
T TIGR02247        92 NTKLRPSMMAAIKTLRAKGFKTACITNNFPTDHSAEEALLPGDIMALFDAVVES  145 (211)
T ss_pred             ccccChhHHHHHHHHHHCCCeEEEEeCCCCccchhhhHhhhhhhHhhCCEEEEe
Confidence            46899999999999999999999999997653  22233 56776666555543

These appear to be members of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases by general homology and the conservation of all of the recognized catalytic motifs (although the first motif is unusual in the replacement of the more common aspartate with glycine...). The variable domain is found in between motifs 1 and 2, indicating membership in subfamily I and phylogeny and prediction of the alpha helical nature of the variable domain (by PSI-PRED) indicate membership in subfamily IA.

>PLN02779 haloacid dehalogenase-like hydrolase family protein

Probab=99.27  E-value=3.5e-11  Score=104.55  Aligned_cols=39  Identities=21%  Similarity=0.206  Sum_probs=35.8

Q ss_pred             CCCCCcHHHHHHHHHHCCCeEEEEcCCCHHHHHHHH-HcC
Q 028799          154 PRLSPGIDELVKKLKANNKNVYLISGGFRHMINILN-ILK  192 (203)
Q Consensus       154 ~~l~PG~~elL~~Lk~~G~~vaIVTn~~~~~i~~ll-~lG  192 (203)
                      ++++||+.++|+.|+++|++++|+||++...+..++ .++
T Consensus       143 ~~l~pGv~elL~~L~~~g~~l~IvTn~~~~~~~~~l~~~~  182 (286)
T PLN02779        143 LPLRPGVLRLMDEALAAGIKVAVCSTSNEKAVSKIVNTLL  182 (286)
T ss_pred             CCchhhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhc
Confidence            589999999999999999999999999999998887 653

>PRK09456 ?-D-glucose-1-phosphatase; Provisional

Probab=99.27  E-value=3.6e-11  Score=98.40  Aligned_cols=120  Identities=15%  Similarity=0.023  Sum_probs=74.9

Q ss_pred             cEEEEECCCcccccchHHHHHH---HcCCCcc-H------HHHHHHHhCCCCCHHHHHHHHHhccCC--CHHHHHHHHHh
Q 028799           84 DAVCFDVDSTVCVDEGIDELAE---FCGAGKA-V------AEWTARAMGGSVPFEEALAARLSLFKP--SLSQVQDFLEK  151 (203)
Q Consensus        84 kaVIFD~DGTLiDse~~~~la~---~~G~~~~-~------~~~~~~~~gG~~~~~e~l~~~~~~~~~--~~e~l~~~~~~  151 (203)
                      .+|+||+||||+|.+....++.   ..+.... .      ...+.+...|.++..+...........  +.+++.+.+.+
T Consensus         1 ~~viFDldgvL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (199)
T PRK09456          1 MLYIFDLGNVIVDIDFNRVLGVWSDLSRVPLATLKKRFTMGEAFHQHERGEISDEAFAEALCHEMALSLSYEQFAHGWQA   80 (199)
T ss_pred             CEEEEeCCCccccCcHHHHHHHHHHhcCCCHHHHHHHHhcCcHHHHHhcCCCCHHHHHHHHHHHhCCCCCHHHHHHHHHH
Confidence            3799999999999865333221   2232210 0      012334444556666554443332211  33444444433


Q ss_pred             CCCCCCCcHHHHHHHHHHCCCeEEEEcCCCHHHHHHHH-H-cCCCccceEEecC
Q 028799          152 RPPRLSPGIDELVKKLKANNKNVYLISGGFRHMINILN-I-LKWDVLKVIQITS  203 (203)
Q Consensus       152 ~~~~l~PG~~elL~~Lk~~G~~vaIVTn~~~~~i~~ll-~-lGL~~~~~i~it~  203 (203)
                      ....++||+.++|+.|+++|++++|+||++...++.++ . .++..++..+++|
T Consensus        81 ~~~~~~~g~~e~L~~l~~~g~~~~i~Sn~~~~~~~~~~~~~~~l~~~fd~v~~s  134 (199)
T PRK09456         81 VFVALRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEEYPEVRAAADHIYLS  134 (199)
T ss_pred             HHhccCHHHHHHHHHHHhCCCcEEEEcCCchhhHHHHHhhchhHHHhcCEEEEe
Confidence            22468999999999999999999999999988877665 4 4777666666554

>TIGR01672 AphA HAD superfamily (subfamily IIIB) phosphatase, TIGR01672

Probab=99.26  E-value=4.9e-11  Score=101.40  Aligned_cols=114  Identities=12%  Similarity=0.107  Sum_probs=75.0

Q ss_pred             CCCCCh-HHHHhhc-cCCc-EEEEECCCcccccchHHHHHHHcCCCccHHHHHHHHhCCCCCHHHHHHHHHhccCCCHHH
Q 028799           68 ENTLPS-KEVLQLW-RTAD-AVCFDVDSTVCVDEGIDELAEFCGAGKAVAEWTARAMGGSVPFEEALAARLSLFKPSLSQ  144 (203)
Q Consensus        68 ~~~~~~-~~~~~~~-~~~k-aVIFD~DGTLiDse~~~~la~~~G~~~~~~~~~~~~~gG~~~~~e~l~~~~~~~~~~~e~  144 (203)
                      +..|.| +++-+-+ .+.+ +|+||+||||+|+....    .+|......+-.....+  ..+              .+.
T Consensus        45 ~~~~~~~~~~~~~~~~~~p~aViFDlDgTLlDSs~~~----~~G~~~~s~~~~~~l~g--~~~--------------w~~  104 (237)
T TIGR01672        45 PIHWISVAQIENSLEGRPPIAVSFDIDDTVLFSSPGF----WRGKKTFSPGSEDYLKN--QVF--------------WEK  104 (237)
T ss_pred             CeeEEEHHHHHHhcCCCCCeEEEEeCCCccccCcHHH----hCCcccCCHHHhhhhcC--hHH--------------HHH
Confidence            467777 4444333 3434 99999999999987644    25554321111111111  011              122


Q ss_pred             HHHHHHhCCCCCCCcHHHHHHHHHHCCCeEEEEcCC----CHHHHHHHH-HcCCCccceEEec
Q 028799          145 VQDFLEKRPPRLSPGIDELVKKLKANNKNVYLISGG----FRHMINILN-ILKWDVLKVIQIT  202 (203)
Q Consensus       145 l~~~~~~~~~~l~PG~~elL~~Lk~~G~~vaIVTn~----~~~~i~~ll-~lGL~~~~~i~it  202 (203)
                      +.+.... ...++|++.++|++|+++|+++++|||+    ....++.++ ++|++.++...++
T Consensus       105 ~~~~~~~-~s~p~~~a~elL~~l~~~G~~i~iVTnr~~~k~~~~a~~ll~~lGi~~~f~~i~~  166 (237)
T TIGR01672       105 VNNGWDE-FSIPKEVARQLIDMHQRRGDAIFFVTGRTPGKTDTVSKTLAKNFHIPAMNPVIFA  166 (237)
T ss_pred             HHHhccc-CCcchhHHHHHHHHHHHCCCEEEEEeCCCCCcCHHHHHHHHHHhCCchheeEEEC
Confidence            2222222 3567888999999999999999999998    777888999 9999988777665

Supporting evidence for the inclusion in the HAD superfamily, whose phosphatase members are magnesium dependent, is the inhibition by EDTA and calcium ions, and stimulation by magnesium ion.

>TIGR01993 Pyr-5-nucltdase pyrimidine 5'-nucleotidase

Probab=99.25  E-value=4e-11  Score=96.65  Aligned_cols=111  Identities=15%  Similarity=0.120  Sum_probs=70.9

Q ss_pred             cEEEEECCCcccccch-----HHHH-----HHHcCCCccHH-HHHHH---HhCCCCCHHHHHHHHHhccCCCHHHHHHHH
Q 028799           84 DAVCFDVDSTVCVDEG-----IDEL-----AEFCGAGKAVA-EWTAR---AMGGSVPFEEALAARLSLFKPSLSQVQDFL  149 (203)
Q Consensus        84 kaVIFD~DGTLiDse~-----~~~l-----a~~~G~~~~~~-~~~~~---~~gG~~~~~e~l~~~~~~~~~~~e~l~~~~  149 (203)
                      ++|+|||||||+|++.     +...     .+.+|.+.... .+...   ..+  .++...+..    ...+.+++.+.+
T Consensus         1 ~~viFDlDGTL~ds~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~~~~~~g--~~~~~~~~~----~~~~~~~~~~~~   74 (184)
T TIGR01993         1 DVWFFDLDNTLYPHSAGIFLQIDRNITEFVAARLKLSEEEARVLRKDYYREYG--TTLAGLMIL----HEIDADEYLRYV   74 (184)
T ss_pred             CeEEEeCCCCCCCCcccHHHHHHHHHHHHHHHHcCcCHHHHHHHHHHHHHHHc--hHHHHHHHh----hCCCHHHHHHHH
Confidence            4799999999999963     2222     23557653221 12211   122  233332211    112444555555


Q ss_pred             HhC----CCCCCCcHHHHHHHHHHCCCeEEEEcCCCHHHHHHHH-HcCCCccceEEecC
Q 028799          150 EKR----PPRLSPGIDELVKKLKANNKNVYLISGGFRHMINILN-ILKWDVLKVIQITS  203 (203)
Q Consensus       150 ~~~----~~~l~PG~~elL~~Lk~~G~~vaIVTn~~~~~i~~ll-~lGL~~~~~i~it~  203 (203)
                      .+.    ..+++||+.++|+.|+   ++++|+||++...+...+ .+|+..++..++++
T Consensus        75 ~~~~~~~~~~~~~g~~~~L~~L~---~~~~i~Tn~~~~~~~~~l~~~gl~~~fd~i~~~  130 (184)
T TIGR01993        75 HGRLPYEKLKPDPELRNLLLRLP---GRKIIFTNGDRAHARRALNRLGIEDCFDGIFCF  130 (184)
T ss_pred             hccCCHHhCCCCHHHHHHHHhCC---CCEEEEeCCCHHHHHHHHHHcCcHhhhCeEEEe
Confidence            431    3578999999999997   589999999999999999 99998877766553

These enzymes are members of the haloacid dehalogenase (HAD) superfamily of hydrolases, specifically the IA subfamily (variant 3, TIGR01509).

>TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490

Probab=99.24  E-value=8.7e-11  Score=95.62  Aligned_cols=115  Identities=17%  Similarity=0.179  Sum_probs=73.4

Q ss_pred             EEEEECCCcccccchHHHHHHH-cC---CCc-c----HHHHHHHHhCCCCCHHHHHHHHH-hccCC-CHHHHHHHHH---
Q 028799           85 AVCFDVDSTVCVDEGIDELAEF-CG---AGK-A----VAEWTARAMGGSVPFEEALAARL-SLFKP-SLSQVQDFLE---  150 (203)
Q Consensus        85 aVIFD~DGTLiDse~~~~la~~-~G---~~~-~----~~~~~~~~~gG~~~~~e~l~~~~-~~~~~-~~e~l~~~~~---  150 (203)
                      +++|||||||+++++...+... ++   ... .    .......+..+..+..+...... ..+.| +.+++..+.+   
T Consensus         1 ~a~FD~DgTL~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~   80 (202)
T TIGR01490         1 LAFFDFDGTLTAKDTLFIFLKFLASKNILFEELRLPKVLARFEFFLNRGLDYMAYYRAFALDALAGLLEEDVRAIVEEFV   80 (202)
T ss_pred             CeEEccCCCCCCCchHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHcCchhHHHHHHHHHHHHcCCCHHHHHHHHHHHH
Confidence            4799999999999885544432 22   110 0    01111222222223333333322 23455 5555544333   


Q ss_pred             -h-CCCCCCCcHHHHHHHHHHCCCeEEEEcCCCHHHHHHHH-HcCCCccceE
Q 028799          151 -K-RPPRLSPGIDELVKKLKANNKNVYLISGGFRHMINILN-ILKWDVLKVI  199 (203)
Q Consensus       151 -~-~~~~l~PG~~elL~~Lk~~G~~vaIVTn~~~~~i~~ll-~lGL~~~~~i  199 (203)
                       + ....++||+.++++.++++|++++|+|+++...++.++ .+|++.++..
T Consensus        81 ~~~~~~~~~~~~~~~l~~l~~~g~~v~ivS~s~~~~v~~~~~~lg~~~~~~~  132 (202)
T TIGR01490        81 NQKIESILYPEARDLIRWHKAEGHTIVLVSASLTILVKPLARILGIDNAIGT  132 (202)
T ss_pred             HHHHHHhccHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHcCCcceEec
Confidence             2 12468999999999999999999999999999999999 9999876544

A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog.

>TIGR01509 HAD-SF-IA-v3 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED

Probab=99.24  E-value=4e-11  Score=95.35  Aligned_cols=49  Identities=27%  Similarity=0.334  Sum_probs=43.0

Q ss_pred             CCCCCcHHHHHHHHHHCCCeEEEEcCCCHHHHHHHH-HcCCCccceEEecC
Q 028799          154 PRLSPGIDELVKKLKANNKNVYLISGGFRHMINILN-ILKWDVLKVIQITS  203 (203)
Q Consensus       154 ~~l~PG~~elL~~Lk~~G~~vaIVTn~~~~~i~~ll-~lGL~~~~~i~it~  203 (203)
                      .+++||+.++|+.|+++|++++|+||++... ..+. ++|+..++..+|+|
T Consensus        84 ~~~~~g~~~~l~~l~~~g~~~~i~Tn~~~~~-~~~~~~~~l~~~f~~i~~~  133 (183)
T TIGR01509        84 LKPLPGVEPLLEALRARGKKLALLTNSPRDH-AVLVQELGLRDLFDVVIFS  133 (183)
T ss_pred             CccCcCHHHHHHHHHHCCCeEEEEeCCchHH-HHHHHhcCCHHHCCEEEEc
Confidence            5899999999999999999999999999988 6666 69998877776654

HAD subfamilies caused by an overly broad single model.

>KOG2914 consensus Predicted haloacid-halidohydrolase and related hydrolases [General function prediction only]

Probab=99.21  E-value=9.2e-11  Score=98.77  Aligned_cols=112  Identities=22%  Similarity=0.199  Sum_probs=78.4

Q ss_pred             hhccCCcEEEEECCCcccccch-----HHHHHHHcCCCccHHHHHHHHhCCCCCHHHHHHHHHhccCC--CHHHHHHHH-
Q 028799           78 QLWRTADAVCFDVDSTVCVDEG-----IDELAEFCGAGKAVAEWTARAMGGSVPFEEALAARLSLFKP--SLSQVQDFL-  149 (203)
Q Consensus        78 ~~~~~~kaVIFD~DGTLiDse~-----~~~la~~~G~~~~~~~~~~~~~gG~~~~~e~l~~~~~~~~~--~~e~l~~~~-  149 (203)
                      .++..+.+++|||||||+||+.     ++.++.++|...+ .++..+.+|  ..-.++.+..+.....  +.+++.... 
T Consensus         5 ~~~~~~~~~lfD~dG~lvdte~~y~~~~~~~~~~ygk~~~-~~~~~~~mG--~~~~eaa~~~~~~~~dp~s~ee~~~e~~   81 (222)
T KOG2914|consen    5 SLSLKVSACLFDMDGTLVDTEDLYTEAWQELLDRYGKPYP-WDVKVKSMG--KRTSEAARLFVKKLPDPVSREEFNKEEE   81 (222)
T ss_pred             ccccceeeEEEecCCcEEecHHHHHHHHHHHHHHcCCCCh-HHHHHHHcC--CCHHHHHHHHHhhcCCCCCHHHHHHHHH
Confidence            3567788999999999999986     5677788997443 455566666  3444554444422222  444433221 


Q ss_pred             ---H-h-CCCCCCCcHHHHHHHHHHCCCeEEEEcCCCHHHHHHHH-HcC
Q 028799          150 ---E-K-RPPRLSPGIDELVKKLKANNKNVYLISGGFRHMINILN-ILK  192 (203)
Q Consensus       150 ---~-~-~~~~l~PG~~elL~~Lk~~G~~vaIVTn~~~~~i~~ll-~lG  192 (203)
                         . . ....++||+.++++.|+.+|++++++|++++...+... .++
T Consensus        82 ~~~~~~~~~~~~~PGa~kLv~~L~~~gip~alat~s~~~~~~~k~~~~~  130 (222)
T KOG2914|consen   82 EILDRLFMNSILMPGAEKLVNHLKNNGIPVALATSSTSASFELKISRHE  130 (222)
T ss_pred             HHHHHhccccccCCcHHHHHHHHHhCCCCeeEEecCCcccHHHHHHHhh
Confidence               1 1 13689999999999999999999999999888877665 544

>TIGR01493 HAD-SF-IA-v2 Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase

Probab=99.17  E-value=1.4e-10  Score=92.40  Aligned_cols=112  Identities=17%  Similarity=0.113  Sum_probs=67.6

Q ss_pred             EEEEECCCcccccchH-HH----HHHHcCCC-------ccHHHHHHHHhCCCCCHHH----HHHHHHhccC--CCHHHHH
Q 028799           85 AVCFDVDSTVCVDEGI-DE----LAEFCGAG-------KAVAEWTARAMGGSVPFEE----ALAARLSLFK--PSLSQVQ  146 (203)
Q Consensus        85 aVIFD~DGTLiDse~~-~~----la~~~G~~-------~~~~~~~~~~~gG~~~~~e----~l~~~~~~~~--~~~e~l~  146 (203)
                      +|+||+||||+|++.. ..    ++...+..       .....+....+++..++.+    .+......+.  .+.+...
T Consensus         1 ~viFD~DGTL~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~   80 (175)
T TIGR01493         1 AMVFDVYGTLVDVHGGVRACLAAIAPEGGAFSDLWRAKQQEYSWRRSLMGDRRAFPEDTVRALRYIADRLGLDAEPKYGE   80 (175)
T ss_pred             CeEEecCCcCcccHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHhcCcCCHHHHHHHHHHHHHHHcCCCCCHHHHH
Confidence            5899999999999852 22    22222210       0012333444555555544    2333222221  1232222


Q ss_pred             HHHHh-CCCCCCCcHHHHHHHHHHCCCeEEEEcCCCHHHHHHHH-HcCCCccceEEecC
Q 028799          147 DFLEK-RPPRLSPGIDELVKKLKANNKNVYLISGGFRHMINILN-ILKWDVLKVIQITS  203 (203)
Q Consensus       147 ~~~~~-~~~~l~PG~~elL~~Lk~~G~~vaIVTn~~~~~i~~ll-~lGL~~~~~i~it~  203 (203)
                      .+.+. ....++||+.++|+       +++|+||+++..++..+ ++|+..++..++|+
T Consensus        81 ~~~~~~~~~~~~~g~~~~L~-------~~~i~Tn~~~~~~~~~l~~~~l~~~fd~v~~~  132 (175)
T TIGR01493        81 RLRDAYKNLPPWPDSAAALA-------RVAILSNASHWAFDQFAQQAGLPWYFDRAFSV  132 (175)
T ss_pred             HHHHHHhcCCCCCchHHHHH-------HHhhhhCCCHHHHHHHHHHCCCHHHHhhhccH
Confidence            22221 13679999999998       48999999999999999 99998887766553

The Subfamily IA and IB capping domains are predicted by PSI-PRED to consist of an alpha helical bundle. Subfamily I encompasses such a wide region of sequence space (the sequences are highly divergent) that modelling it with a single alignment is impossible, resulting in an overly broad description which allows in many unrelated sequences. Subfamily IA and IB are separated based on an aparrent phylogenetic bifurcation. Subfamily IA is still too broad to model, but cannot be further subdivided into large chunks based on phylogenetic trees. Of the three motifs defining the HAD superfamily, the third has three variant forms : (1) hhhhsDxxx(x)D, (2) hhhhssxxx(x)D and (3) hhhhDDxxx(x)s where _s_ refers to a small amino acid and _h_ to a hydrophobic one. All three of these variants are found in subfamily IA. Individual models were made based on seeds exhibiting only o

>TIGR01549 HAD-SF-IA-v1 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E

Probab=99.16  E-value=2.1e-10  Score=89.56  Aligned_cols=105  Identities=20%  Similarity=0.198  Sum_probs=67.0

Q ss_pred             EEEEECCCcccccch-----HHHHHHHcCCCccHHHHHHHHhCCCCCHHHHHHHHHhccCCCHHHHHHHHHhCCCCCCCc
Q 028799           85 AVCFDVDSTVCVDEG-----IDELAEFCGAGKAVAEWTARAMGGSVPFEEALAARLSLFKPSLSQVQDFLEKRPPRLSPG  159 (203)
Q Consensus        85 aVIFD~DGTLiDse~-----~~~la~~~G~~~~~~~~~~~~~gG~~~~~e~l~~~~~~~~~~~e~l~~~~~~~~~~l~PG  159 (203)
                      +++||+||||+|+..     |...++++|..  ...+ ....+  ..... +.....    ..+++.. +.. ....+||
T Consensus         1 ~iifD~DGTL~d~~~~~~~~~~~~~~~~~~~--~~~~-~~~~g--~~~~~-~~~~~~----~~~~~~~-~~~-~~~~~~g   68 (154)
T TIGR01549         1 AILFDIDGTLVDSSFAIRRAFEETLEEFGED--FQAL-KALRG--LAEEL-LYRIAT----SFEELLG-YDA-EEAYIRG   68 (154)
T ss_pred             CeEecCCCcccccHHHHHHHHHHHHHHhccc--HHHH-HHHHc--cChHH-HHHHHH----HHHHHhC-cch-hheeccC
Confidence            489999999999963     45555666652  2222 22232  12211 111111    1222222 222 3567899


Q ss_pred             HHHHHHHHHHCCCeEEEEcCCCHHHHHHHH-HcCCCccceEEec
Q 028799          160 IDELVKKLKANNKNVYLISGGFRHMINILN-ILKWDVLKVIQIT  202 (203)
Q Consensus       160 ~~elL~~Lk~~G~~vaIVTn~~~~~i~~ll-~lGL~~~~~i~it  202 (203)
                      +.++|+.|+++|++++|+||+++..+..++ .+ +..++..+++
T Consensus        69 ~~e~l~~L~~~g~~~~i~T~~~~~~~~~~~~~~-l~~~f~~i~~  111 (154)
T TIGR01549        69 AADLLKRLKEAGIKLGIISNGSLRAQKLLLRKH-LGDYFDLILG  111 (154)
T ss_pred             HHHHHHHHHHCcCeEEEEeCCchHHHHHHHHHH-HHhcCcEEEe
Confidence            999999999999999999999999999888 66 6666555444

HAD subfamilies caused by an overly broad single model.

>PHA02597 30

Probab=99.16  E-value=1.7e-10  Score=93.91  Aligned_cols=108  Identities=9%  Similarity=0.060  Sum_probs=63.5

Q ss_pred             CCcEEEEECCCcccccch-HHHHHHHcCCCccHHHHHHHHhCCCCCHHHHHHHHHhccCCCHHH-HHHHHHh---CCCCC
Q 028799           82 TADAVCFDVDSTVCVDEG-IDELAEFCGAGKAVAEWTARAMGGSVPFEEALAARLSLFKPSLSQ-VQDFLEK---RPPRL  156 (203)
Q Consensus        82 ~~kaVIFD~DGTLiDse~-~~~la~~~G~~~~~~~~~~~~~gG~~~~~e~l~~~~~~~~~~~e~-l~~~~~~---~~~~l  156 (203)
                      |+++|+|||||||+|... +..+.+.+|.+.  .+. ....++..  ...+...+.......++ +..+.+.   ....+
T Consensus         1 m~k~viFDlDGTLiD~~~~~~~~~~~~g~~~--~~~-~~~~g~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   75 (197)
T PHA02597          1 MKPTILTDVDGVLLSWQSGLPYFAQKYNIPT--DHI-LKMIQDER--FRDPGELFGCDQELAKKLIEKYNNSDFIRYLSA   75 (197)
T ss_pred             CCcEEEEecCCceEchhhccHHHHHhcCCCH--HHH-HHHHhHhh--hcCHHHHhcccHHHHHHHhhhhhHHHHHHhccC
Confidence            579999999999999653 445667788753  222 22233211  11112222110000111 1222211   13679


Q ss_pred             CCcHHHHHHHHHHCCCeEEEEcCCCHHHHHHHH-HcCCCc
Q 028799          157 SPGIDELVKKLKANNKNVYLISGGFRHMINILN-ILKWDV  195 (203)
Q Consensus       157 ~PG~~elL~~Lk~~G~~vaIVTn~~~~~i~~ll-~lGL~~  195 (203)
                      +||+.++|+.|+++ ++++++||++........ .+|+..
T Consensus        76 ~pG~~e~L~~L~~~-~~~~i~Tn~~~~~~~~~~~~~~l~~  114 (197)
T PHA02597         76 YDDALDVINKLKED-YDFVAVTALGDSIDALLNRQFNLNA  114 (197)
T ss_pred             CCCHHHHHHHHHhc-CCEEEEeCCccchhHHHHhhCCHHH
Confidence            99999999999987 578888998776655566 777754

2 hypothetical protein; Provisional

>TIGR01545 YfhB_g-proteo haloacid dehalogenase superfamily, subfamily IF hydrolase, YfhB

Probab=99.10  E-value=1.3e-09  Score=90.74  Aligned_cols=111  Identities=14%  Similarity=0.213  Sum_probs=64.3

Q ss_pred             CCcEEEEECCCcccccchHHHHHHHc-CCCc---cH-HHHHHH-----HhCCCCCHHHHHHHH-HhccCC-CHHHHHH--
Q 028799           82 TADAVCFDVDSTVCVDEGIDELAEFC-GAGK---AV-AEWTAR-----AMGGSVPFEEALAAR-LSLFKP-SLSQVQD--  147 (203)
Q Consensus        82 ~~kaVIFD~DGTLiDse~~~~la~~~-G~~~---~~-~~~~~~-----~~gG~~~~~e~l~~~-~~~~~~-~~e~l~~--  147 (203)
                      ..+.++|||||||++.+++..+..+. +...   .. ......     ...+..+... .... ...+.| +.+++++  
T Consensus         4 ~~~la~FDfDgTLt~~ds~~~fl~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~-~~~l~~~~~~g~~~~~l~~~~   82 (210)
T TIGR01545         4 AKRIIFFDLDGTLHQQDMFGSFLRFLLRHLPLNALLVIPLLPIIAIALLIGGRAARWP-MSLLLWACTFGHREAHLQDLE   82 (210)
T ss_pred             cCcEEEEcCCCCCccCccHHHHHHHHHHHhHHHHHHHHHHHHHHHHhhcccccccchh-hHHHHHHHHcCCCHHHHHHHH
Confidence            45789999999999999865544322 1100   00 000000     1111111111 1111 112334 4433332  


Q ss_pred             --HHHhC--CCCCCCcHHHHHH-HHHHCCCeEEEEcCCCHHHHHHHH-HcCC
Q 028799          148 --FLEKR--PPRLSPGIDELVK-KLKANNKNVYLISGGFRHMINILN-ILKW  193 (203)
Q Consensus       148 --~~~~~--~~~l~PG~~elL~-~Lk~~G~~vaIVTn~~~~~i~~ll-~lGL  193 (203)
                        +.+.+  ...++||+.++|+ +++++|++++||||++...+++++ ..++
T Consensus        83 ~~f~~~~~~~~~l~pga~e~L~~~l~~~G~~v~IvSas~~~~~~~ia~~~~~  134 (210)
T TIGR01545        83 ADFVAAFRDKVTAFPLVAERLRQYLESSDADIWLITGSPQPLVEAVYFDSNF  134 (210)
T ss_pred             HHHHHHHHHhCCCCccHHHHHHHHHHhCCCEEEEEcCCcHHHHHHHHHhccc
Confidence              22211  2468999999996 788899999999999999999998 7555

The gene name comes from the E. coli gene. There is currently no information regarding the function of this gene.

>PRK10748 flavin mononucleotide phosphatase; Provisional

Probab=99.08  E-value=9.8e-10  Score=92.61  Aligned_cols=46  Identities=9%  Similarity=0.091  Sum_probs=37.4

Q ss_pred             CCCCCCcHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHcCCCccceEEecC
Q 028799          153 PPRLSPGIDELVKKLKANNKNVYLISGGFRHMINILNILKWDVLKVIQITS  203 (203)
Q Consensus       153 ~~~l~PG~~elL~~Lk~~G~~vaIVTn~~~~~i~~ll~lGL~~~~~i~it~  203 (203)
                      ...++||+.++|+.|++. ++++|+||+....    -.+|+..++..+++|
T Consensus       111 ~~~~~~gv~~~L~~L~~~-~~l~i~Tn~~~~~----~~~gl~~~fd~i~~~  156 (238)
T PRK10748        111 RIDVPQATHDTLKQLAKK-WPLVAITNGNAQP----ELFGLGDYFEFVLRA  156 (238)
T ss_pred             cCCCCccHHHHHHHHHcC-CCEEEEECCCchH----HHCCcHHhhceeEec
Confidence            368999999999999975 9999999988651    278888877766654

>COG1011 Predicted hydrolase (HAD superfamily) [General function prediction only]

Probab=99.00  E-value=4.5e-09  Score=86.62  Aligned_cols=49  Identities=16%  Similarity=-0.035  Sum_probs=45.5

Q ss_pred             CCCCCcHHHHHHHHHHCCCeEEEEcCCCHHHHHHHH-HcCCCccceEEecC
Q 028799          154 PRLSPGIDELVKKLKANNKNVYLISGGFRHMINILN-ILKWDVLKVIQITS  203 (203)
Q Consensus       154 ~~l~PG~~elL~~Lk~~G~~vaIVTn~~~~~i~~ll-~lGL~~~~~i~it~  203 (203)
                      .+++|++.+.|+.|+++ ++++|+||+....+...+ .+||.+++..+++|
T Consensus        98 ~~~~~~~~~~L~~l~~~-~~l~ilTNg~~~~~~~~l~~~gl~~~Fd~v~~s  147 (229)
T COG1011          98 LPDYPEALEALKELGKK-YKLGILTNGARPHQERKLRQLGLLDYFDAVFIS  147 (229)
T ss_pred             CccChhHHHHHHHHHhh-ccEEEEeCCChHHHHHHHHHcCChhhhheEEEe
Confidence            68999999999999999 999999999999999998 99999988888876

>KOG3120 consensus Predicted haloacid dehalogenase-like hydrolase [General function prediction only]

Probab=98.92  E-value=5.6e-09  Score=87.36  Aligned_cols=113  Identities=12%  Similarity=0.144  Sum_probs=87.3

Q ss_pred             CCcEEEEECCCcccccchHHHHHHHcCCCccHHHHHHHHhCCCCCHHHHHHHHHhcc--CC-CHHHHHHHHHhCCCCCCC
Q 028799           82 TADAVCFDVDSTVCVDEGIDELAEFCGAGKAVAEWTARAMGGSVPFEEALAARLSLF--KP-SLSQVQDFLEKRPPRLSP  158 (203)
Q Consensus        82 ~~kaVIFD~DGTLiDse~~~~la~~~G~~~~~~~~~~~~~gG~~~~~e~l~~~~~~~--~~-~~e~l~~~~~~~~~~l~P  158 (203)
                      +...++||||-||+|.++...+.+.++......++...+-.|  -+.+.+.+.+..+  ++ +.+++.+.++.  +++.|
T Consensus        12 ~ril~~FDFD~TIid~dSD~wVv~~lp~~~l~~qL~~t~p~~--~Wne~M~rv~k~Lheqgv~~~~ik~~~r~--iP~~P   87 (256)
T KOG3120|consen   12 PRILLVFDFDRTIIDQDSDNWVVDELPTTDLFNQLRDTYPKG--FWNELMDRVFKELHEQGVRIAEIKQVLRS--IPIVP   87 (256)
T ss_pred             CcEEEEEecCceeecCCcchHHHHhcccchhHHHHHHhcccc--hHHHHHHHHHHHHHHcCCCHHHHHHHHhc--CCCCc
Confidence            344789999999999999888888888765444443332221  2455555544443  34 67888888887  58999


Q ss_pred             cHHHHHHHHHHCCC-eEEEEcCCCHHHHHHHH-HcCCCccce
Q 028799          159 GIDELVKKLKANNK-NVYLISGGFRHMINILN-ILKWDVLKV  198 (203)
Q Consensus       159 G~~elL~~Lk~~G~-~vaIVTn~~~~~i~~ll-~lGL~~~~~  198 (203)
                      |+.++++.+++.|. .+.|||.+...+++.++ ++|+.++|.
T Consensus        88 gmv~lik~~ak~g~~eliIVSDaNsfFIe~~Lea~~~~d~F~  129 (256)
T KOG3120|consen   88 GMVRLIKSAAKLGCFELIIVSDANSFFIEEILEAAGIHDLFS  129 (256)
T ss_pred             cHHHHHHHHHhCCCceEEEEecCchhHHHHHHHHccHHHHHH
Confidence            99999999999996 99999999999999999 999988765

>PLN02811 hydrolase

Probab=98.91  E-value=1.2e-08  Score=84.77  Aligned_cols=110  Identities=18%  Similarity=0.204  Sum_probs=68.1

Q ss_pred             CCCcccccch-----HHHHHHHcCCCccHHHHHHHHhCCCCCHHHHHHHHHhc--cC-C-CHHHH----HHHHHh--CCC
Q 028799           90 VDSTVCVDEG-----IDELAEFCGAGKAVAEWTARAMGGSVPFEEALAARLSL--FK-P-SLSQV----QDFLEK--RPP  154 (203)
Q Consensus        90 ~DGTLiDse~-----~~~la~~~G~~~~~~~~~~~~~gG~~~~~e~l~~~~~~--~~-~-~~e~l----~~~~~~--~~~  154 (203)
                      |||||+||+.     |..+.+.+|+... .+....++|  .+..+.+......  .. . ..+.+    ..++..  ...
T Consensus         1 ~DGTL~Ds~~~~~~a~~~~~~~~g~~~~-~~~~~~~~G--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   77 (220)
T PLN02811          1 MDGLLLDTEKFYTEVQEKILARYGKTFD-WSLKAKMMG--KKAIEAARIFVEESGLSDSLSPEDFLVEREAMLQDLFPTS   77 (220)
T ss_pred             CCCcceecHHHHHHHHHHHHHHcCCCCC-HHHHHHccC--CCHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHhhC
Confidence            7999999986     3455567887633 344455565  3433333332221  11 1 12222    122221  136


Q ss_pred             CCCCcHHHHHHHHHHCCCeEEEEcCCCHHHHHH-HH-HcCCCccceEEec
Q 028799          155 RLSPGIDELVKKLKANNKNVYLISGGFRHMINI-LN-ILKWDVLKVIQIT  202 (203)
Q Consensus       155 ~l~PG~~elL~~Lk~~G~~vaIVTn~~~~~i~~-ll-~lGL~~~~~i~it  202 (203)
                      .++||+.++|+.|+++|++++|+||+.+..+.. +. ..++..++..+++
T Consensus        78 ~l~~gv~e~l~~L~~~g~~~~i~S~~~~~~~~~~~~~~~~l~~~f~~i~~  127 (220)
T PLN02811         78 DLMPGAERLVRHLHAKGIPIAIATGSHKRHFDLKTQRHGELFSLMHHVVT  127 (220)
T ss_pred             CCCccHHHHHHHHHHCCCcEEEEeCCchhhHHHHHcccHHHHhhCCEEEE
Confidence            889999999999999999999999999875544 34 4577666655554

>PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B

Probab=98.88  E-value=5.6e-09  Score=83.70  Aligned_cols=41  Identities=32%  Similarity=0.408  Sum_probs=37.1

Q ss_pred             CcHHHHHHHHHHCCCeEEEEcCCCHHHHHHHH-HcCCCccce
Q 028799          158 PGIDELVKKLKANNKNVYLISGGFRHMINILN-ILKWDVLKV  198 (203)
Q Consensus       158 PG~~elL~~Lk~~G~~vaIVTn~~~~~i~~ll-~lGL~~~~~  198 (203)
                      |++.++|++++++|++++|+|+++...+++++ .+|++...+
T Consensus        92 ~~~~e~i~~~~~~~~~v~IvS~~~~~~i~~~~~~~~i~~~~v  133 (192)
T PF12710_consen   92 PDAMELIRELKDNGIKVVIVSGSPDEIIEPIAERLGIDDDNV  133 (192)
T ss_dssp             TTHHHHHHHHHHTTSEEEEEEEEEHHHHHHHHHHTTSSEGGE
T ss_pred             hhHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCCceEE
Confidence            66669999999999999999999999999999 999987543

>cd01427 HAD_like Haloacid dehalogenase-like hydrolases

Probab=98.86  E-value=6.1e-09  Score=77.33  Aligned_cols=48  Identities=25%  Similarity=0.187  Sum_probs=41.9

Q ss_pred             CCCCCCcHHHHHHHHHHCCCeEEEEcCCCHHHHHHHH-HcCCCccceEE
Q 028799          153 PPRLSPGIDELVKKLKANNKNVYLISGGFRHMINILN-ILKWDVLKVIQ  200 (203)
Q Consensus       153 ~~~l~PG~~elL~~Lk~~G~~vaIVTn~~~~~i~~ll-~lGL~~~~~i~  200 (203)
                      ...++||+.++|+.|+++|++++|+||+.+..++.++ .+|+..++...
T Consensus        22 ~~~~~~~~~~~l~~l~~~g~~i~ivS~~~~~~~~~~~~~~~~~~~~~~i   70 (139)
T cd01427          22 ELELYPGVKEALKELKEKGIKLALATNKSRREVLELLEELGLDDYFDPV   70 (139)
T ss_pred             cCCcCcCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHHHcCCchhhhhe
Confidence            3689999999999999999999999999999999999 98886544433

The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.

>TIGR01684 viral_ppase viral phosphatase

Probab=98.81  E-value=1.4e-08  Score=88.60  Aligned_cols=47  Identities=26%  Similarity=0.154  Sum_probs=43.0

Q ss_pred             CCcHHHHHHHHHHCCCeEEEEcCCCHHHHHHHH-HcCCCccceEEecC
Q 028799          157 SPGIDELVKKLKANNKNVYLISGGFRHMINILN-ILKWDVLKVIQITS  203 (203)
Q Consensus       157 ~PG~~elL~~Lk~~G~~vaIVTn~~~~~i~~ll-~lGL~~~~~i~it~  203 (203)
                      .||+.++|++|+++|++++|+||+.+..+...+ .+|++.++.++|++
T Consensus       148 dPgV~EaL~~LkekGikLaIaTS~~Re~v~~~L~~lGLd~YFdvIIs~  195 (301)
T TIGR01684       148 DPRIYDSLTELKKRGCILVLWSYGDRDHVVESMRKVKLDRYFDIIISG  195 (301)
T ss_pred             CHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHcCCCcccCEEEEC
Confidence            489999999999999999999999999999999 99999988777753

These proteins also include an N-terminal domain (ca. 125 aas) that is unique to this clade.

>PHA03398 viral phosphatase superfamily protein; Provisional

Probab=98.73  E-value=3.5e-08  Score=86.19  Aligned_cols=47  Identities=21%  Similarity=0.073  Sum_probs=42.6

Q ss_pred             CCcHHHHHHHHHHCCCeEEEEcCCCHHHHHHHH-HcCCCccceEEecC
Q 028799          157 SPGIDELVKKLKANNKNVYLISGGFRHMINILN-ILKWDVLKVIQITS  203 (203)
Q Consensus       157 ~PG~~elL~~Lk~~G~~vaIVTn~~~~~i~~ll-~lGL~~~~~i~it~  203 (203)
                      .||+.++|++|+++|++++|+||+.+..++..+ .+|++.++.++|++
T Consensus       150 dp~V~EtL~eLkekGikLaIvTNg~Re~v~~~Le~lgL~~yFDvII~~  197 (303)
T PHA03398        150 DPFVYDSLDELKERGCVLVLWSYGNREHVVHSLKETKLEGYFDIIICG  197 (303)
T ss_pred             ChhHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHcCCCccccEEEEC
Confidence            489999999999999999999999999999999 99999988776653

>TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC

Probab=98.68  E-value=2.9e-08  Score=76.42  Aligned_cols=47  Identities=19%  Similarity=-0.005  Sum_probs=39.6

Q ss_pred             CCCCcHHHHHHHHHHCCCeEEEEcCC-CHHHHHHHH-HcC-------CCccceEEe
Q 028799          155 RLSPGIDELVKKLKANNKNVYLISGG-FRHMINILN-ILK-------WDVLKVIQI  201 (203)
Q Consensus       155 ~l~PG~~elL~~Lk~~G~~vaIVTn~-~~~~i~~ll-~lG-------L~~~~~i~i  201 (203)
                      +++||+.++|++|+++|++++|+||+ ....+..++ .++       +..++...+
T Consensus        29 ~~~~gv~e~L~~Lk~~g~~l~i~Sn~~~~~~~~~~l~~~~~~~~i~~l~~~f~~~~   84 (128)
T TIGR01681        29 VTIKEIRDKLQTLKKNGFLLALASYNDDPHVAYELLKIFEDFGIIFPLAEYFDPLT   84 (128)
T ss_pred             HHHHHHHHHHHHHHHCCeEEEEEeCCCCHHHHHHHHHhccccccchhhHhhhhhhh
Confidence            57999999999999999999999999 788888888 777       666555444

No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC.

>TIGR01685 MDP-1 magnesium-dependent phosphatase-1

Probab=98.68  E-value=1e-08  Score=83.44  Aligned_cols=51  Identities=12%  Similarity=0.014  Sum_probs=45.3

Q ss_pred             CCCCCCcHHHHHHHHHHCCCeEEEEcCC-CHHHHHHHH-HcCCC---------ccceEEecC
Q 028799          153 PPRLSPGIDELVKKLKANNKNVYLISGG-FRHMINILN-ILKWD---------VLKVIQITS  203 (203)
Q Consensus       153 ~~~l~PG~~elL~~Lk~~G~~vaIVTn~-~~~~i~~ll-~lGL~---------~~~~i~it~  203 (203)
                      ...++||+.++|+.|+++|++++|+||+ ....++.++ .+|+.         .++..++++
T Consensus        43 ~~~l~pGv~elL~~Lk~~G~~l~I~Sn~~~~~~~~~~L~~~~l~~~~~~~~~~~~Fd~iv~~  104 (174)
T TIGR01685        43 EVTLIKEVRDVLQTLKDAGTYLATASWNDVPEWAYEILGTFEITYAGKTVPMHSLFDDRIEI  104 (174)
T ss_pred             EEEEcccHHHHHHHHHHCCCEEEEEeCCCChHHHHHHHHhCCcCCCCCcccHHHhceeeeec
Confidence            3689999999999999999999999998 888889998 99998         877776653

This model represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterized as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues.

>PRK08238 hypothetical protein; Validated

Probab=98.66  E-value=1.1e-07  Score=88.28  Aligned_cols=97  Identities=14%  Similarity=0.139  Sum_probs=62.9

Q ss_pred             EEEEECCCcccccchHHHHHHHc-CCC-ccHHHHHHHHhCCCCCHHHHHHHHHhccCCCHHHHHHHHHhCCCCCCCcHHH
Q 028799           85 AVCFDVDSTVCVDEGIDELAEFC-GAG-KAVAEWTARAMGGSVPFEEALAARLSLFKPSLSQVQDFLEKRPPRLSPGIDE  162 (203)
Q Consensus        85 aVIFD~DGTLiDse~~~~la~~~-G~~-~~~~~~~~~~~gG~~~~~e~l~~~~~~~~~~~e~l~~~~~~~~~~l~PG~~e  162 (203)
                      -.+||+||||+.++.+.+....+ ... ...-........|.    ..+++.+....+        ++....+++||+.+
T Consensus        12 pl~~DlDgTLi~td~l~e~~~~~l~~~p~~~~~l~~~~~~g~----a~lK~~~a~~~~--------~d~~~lp~~pga~e   79 (479)
T PRK08238         12 PLVVDLDGTLIRTDLLHESIFALLRRNPLALLRLPLWLLRGK----AALKRRLARRVD--------LDVATLPYNEEVLD   79 (479)
T ss_pred             CEEEeCCCCccccchHHHHHHHHHHhChHHHHHHHHHHHhcH----HHHHHHHHhhcC--------CChhhCCCChhHHH
Confidence            48999999999999987765543 211 11111111122222    222222211000        11112468899999


Q ss_pred             HHHHHHHCCCeEEEEcCCCHHHHHHHH-HcCC
Q 028799          163 LVKKLKANNKNVYLISGGFRHMINILN-ILKW  193 (203)
Q Consensus       163 lL~~Lk~~G~~vaIVTn~~~~~i~~ll-~lGL  193 (203)
                      ++++++++|++++|+||+++..++.++ ++|+
T Consensus        80 ~L~~lk~~G~~v~LaTas~~~~a~~i~~~lGl  111 (479)
T PRK08238         80 YLRAERAAGRKLVLATASDERLAQAVAAHLGL  111 (479)
T ss_pred             HHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCC
Confidence            999999999999999999999999999 9997

>PRK11009 aphA acid phosphatase/phosphotransferase; Provisional

Probab=98.65  E-value=1.3e-07  Score=80.46  Aligned_cols=110  Identities=15%  Similarity=0.141  Sum_probs=68.3

Q ss_pred             CCCCCh-HHHHh-hccCCc-EEEEECCCcccccchHHHHHH-HcCCCccHHHHHHHHhCCCCCHHHHHHHHHhccCCCHH
Q 028799           68 ENTLPS-KEVLQ-LWRTAD-AVCFDVDSTVCVDEGIDELAE-FCGAGKAVAEWTARAMGGSVPFEEALAARLSLFKPSLS  143 (203)
Q Consensus        68 ~~~~~~-~~~~~-~~~~~k-aVIFD~DGTLiDse~~~~la~-~~G~~~~~~~~~~~~~gG~~~~~e~l~~~~~~~~~~~e  143 (203)
                      +..|.| +++-+ +..+.+ +|+||+|||++|+........ .|+..             ..++          +  +.+
T Consensus        45 ~~~~~~~~~~~~~~~~~~p~av~~DIDeTvldnsp~~~~~~~~f~~~-------------~~~y----------~--~~~   99 (237)
T PRK11009         45 PVHWVSVAQIEKSLEGRPPMAVGFDIDDTVLFSSPGFWRGKKTFSPG-------------SEDY----------L--KNQ   99 (237)
T ss_pred             CeeEEEHHHhhhhccCCCCcEEEEECcCccccCCchheeeeeccCCC-------------cccc----------c--ChH
Confidence            356666 33332 233434 999999999999765332221 11100             0011          0  112


Q ss_pred             HHHHHHHh---CCCCCCCcHHHHHHHHHHCCCeEEEEcCC----CHHHHHHHH-HcCC--CccceEEec
Q 028799          144 QVQDFLEK---RPPRLSPGIDELVKKLKANNKNVYLISGG----FRHMINILN-ILKW--DVLKVIQIT  202 (203)
Q Consensus       144 ~l~~~~~~---~~~~l~PG~~elL~~Lk~~G~~vaIVTn~----~~~~i~~ll-~lGL--~~~~~i~it  202 (203)
                      ++.+++.+   ....++||+.++|+.|+++|+++++|||.    ....++.++ .+|+  +.++.+.++
T Consensus       100 ~fw~~y~~~~~~~a~p~~Ga~elL~~L~~~G~~I~iVTnR~~~k~~~t~~~Llk~~gip~~~~f~vil~  168 (237)
T PRK11009        100 KFWEKMNNGWDEFSIPKEVARQLIDMHVKRGDSIYFITGRTATKTETVSKTLADDFHIPADNMNPVIFA  168 (237)
T ss_pred             HHHHHHHhcccccCcchHHHHHHHHHHHHCCCeEEEEeCCCCcccHHHHHHHHHHcCCCcccceeEEEc
Confidence            22233221   13689999999999999999999999994    466777888 7999  666666554

>TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA

Probab=98.59  E-value=3.1e-07  Score=70.10  Aligned_cols=43  Identities=14%  Similarity=0.091  Sum_probs=38.5

Q ss_pred             CCCCcHHHHHHHHHHCCCeEEEEcCCC--------HHHHHHHH-HcCCCccc
Q 028799          155 RLSPGIDELVKKLKANNKNVYLISGGF--------RHMINILN-ILKWDVLK  197 (203)
Q Consensus       155 ~l~PG~~elL~~Lk~~G~~vaIVTn~~--------~~~i~~ll-~lGL~~~~  197 (203)
                      .++||+.++|+.|+++|++++|+||++        ...++.++ .+|+..++
T Consensus        25 ~~~~~v~~~l~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~~l~~~~l~~~~   76 (132)
T TIGR01662        25 ILYPEVPDALAELKEAGYKVVIVTNQSGIGRGKFSSGRVARRLEELGVPIDV   76 (132)
T ss_pred             eeCCCHHHHHHHHHHCCCEEEEEECCccccccHHHHHHHHHHHHHCCCCEEE
Confidence            579999999999999999999999999        78888888 99997433

In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme.

>TIGR01544 HAD-SF-IE haloacid dehalogenase superfamily, subfamily IE hydrolase, TIGR01544

Probab=98.55  E-value=1.4e-06  Score=75.83  Aligned_cols=57  Identities=12%  Similarity=0.247  Sum_probs=50.7

Q ss_pred             CHHHHHHHHHhCCCCCCCcHHHHHHHHHHCCCeEEEEcCCCHHHHHHHH-HcCCCccc
Q 028799          141 SLSQVQDFLEKRPPRLSPGIDELVKKLKANNKNVYLISGGFRHMINILN-ILKWDVLK  197 (203)
Q Consensus       141 ~~e~l~~~~~~~~~~l~PG~~elL~~Lk~~G~~vaIVTn~~~~~i~~ll-~lGL~~~~  197 (203)
                      +.+++.+++++..+++.||+.+++++|+++|++++|+|+|+...++.++ ++|+.+..
T Consensus       107 ~~e~i~~~v~~~~l~l~pG~~efl~~L~~~GIpv~IvS~G~~~~Ie~vL~~lgl~~~~  164 (277)
T TIGR01544       107 PKAKIKEIVAESDVMLKDGYENFFDKLQQHSIPVFIFSAGIGNVLEEVLRQAGVYHPN  164 (277)
T ss_pred             CHHHHHHHHhhcCCccCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHHcCCCCcC
Confidence            5777888887556899999999999999999999999999999999999 89986433

This group of sequences was found during searches for members of the haloacid dehalogenase (HAD) superfamily. All of the conserved catalytic motifs are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches (IA, TIGR01493, TIGR01509, TIGR01549; IB, TIGR01488; IC, TIGR01494; ID, TIGR01658; IF TIGR01545) of that subfamily as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.

>TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459

Probab=98.49  E-value=3.3e-07  Score=77.36  Aligned_cols=49  Identities=27%  Similarity=0.339  Sum_probs=42.6

Q ss_pred             CCCCcHHHHHHHHHHCCCeEEEEcCCCHHHHH--HHH-HcCCCc-cceEEecC
Q 028799          155 RLSPGIDELVKKLKANNKNVYLISGGFRHMIN--ILN-ILKWDV-LKVIQITS  203 (203)
Q Consensus       155 ~l~PG~~elL~~Lk~~G~~vaIVTn~~~~~i~--~ll-~lGL~~-~~~i~it~  203 (203)
                      .++||+.++|++|+++|++++++||+++...+  ..+ ++|++. .+..++||
T Consensus        24 ~~~pga~e~L~~L~~~G~~~~ivTN~~~~~~~~~~~L~~~gl~~~~~~~Ii~s   76 (242)
T TIGR01459        24 HTYPGAVQNLNKIIAQGKPVYFVSNSPRNIFSLHKTLKSLGINADLPEMIISS   76 (242)
T ss_pred             ccCccHHHHHHHHHHCCCEEEEEeCCCCChHHHHHHHHHCCCCccccceEEcc
Confidence            46999999999999999999999999988765  677 999987 77777775

This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily)

>TIGR01664 DNA-3'-Pase DNA 3'-phosphatase

Probab=98.42  E-value=8.6e-07  Score=71.31  Aligned_cols=40  Identities=18%  Similarity=0.219  Sum_probs=35.4

Q ss_pred             CCCcHHHHHHHHHHCCCeEEEEcCCCHH------------HHHHHH-HcCCCc
Q 028799          156 LSPGIDELVKKLKANNKNVYLISGGFRH------------MINILN-ILKWDV  195 (203)
Q Consensus       156 l~PG~~elL~~Lk~~G~~vaIVTn~~~~------------~i~~ll-~lGL~~  195 (203)
                      ++||+.++|+.|+++|++++|+||++..            .++.++ ++|+..
T Consensus        43 ~~pgv~e~L~~Lk~~G~~l~I~TN~~~~~~~~~~~~~~~~~i~~~l~~~gl~~   95 (166)
T TIGR01664        43 LYPEIPAKLQELDDEGYKIVIFTNQSGIGRGKLSAESFKNKIEAFLEKLKVPI   95 (166)
T ss_pred             ecCCHHHHHHHHHHCCCEEEEEeCCcccccCcccHHHHHHHHHHHHHHcCCCE
Confidence            7899999999999999999999998863            467788 999965

The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region.

>TIGR01533 lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) family

Probab=98.38  E-value=3.3e-06  Score=73.09  Aligned_cols=86  Identities=10%  Similarity=0.155  Sum_probs=56.8

Q ss_pred             cCCcEEEEECCCcccccchHHHHHHHcCCCccHHHHHHHHhCCCCCHHHHHHHHHhccCCCHHHHHHHHHhCCCCCCCcH
Q 028799           81 RTADAVCFDVDSTVCVDEGIDELAEFCGAGKAVAEWTARAMGGSVPFEEALAARLSLFKPSLSQVQDFLEKRPPRLSPGI  160 (203)
Q Consensus        81 ~~~kaVIFD~DGTLiDse~~~~la~~~G~~~~~~~~~~~~~gG~~~~~e~l~~~~~~~~~~~e~l~~~~~~~~~~l~PG~  160 (203)
                      .+..+|+||+|+|++|...+.  +...             .+| .++             +.+...++.......++||+
T Consensus        73 ~kp~AVV~DIDeTvLdns~y~--~~~~-------------~~~-~~~-------------~~~~w~~wv~~~~a~~ipGA  123 (266)
T TIGR01533        73 DKKYAIVLDLDETVLDNSPYQ--GYQV-------------LNN-KPF-------------DPETWDKWVQAAQAKPVAGA  123 (266)
T ss_pred             CCCCEEEEeCccccccChHHH--HHHh-------------cCC-CcC-------------CHHHHHHHHHcCCCCcCccH
Confidence            456799999999999965431  1100             010 011             11222233333346899999


Q ss_pred             HHHHHHHHHCCCeEEEEcCCCHH---HHHHHH-HcCCCc
Q 028799          161 DELVKKLKANNKNVYLISGGFRH---MINILN-ILKWDV  195 (203)
Q Consensus       161 ~elL~~Lk~~G~~vaIVTn~~~~---~i~~ll-~lGL~~  195 (203)
                      .++|++|+++|++++++||....   .+...+ .+|++.
T Consensus       124 ~e~L~~L~~~G~~v~iVTnR~~~~~~~T~~~Lkk~Gi~~  162 (266)
T TIGR01533       124 LDFLNYANSKGVKIFYVSNRSEKEKAATLKNLKRFGFPQ  162 (266)
T ss_pred             HHHHHHHHHCCCeEEEEeCCCcchHHHHHHHHHHcCcCC
Confidence            99999999999999999998744   344667 899865

which in turn belongs to the haloacid dehalogenase (HAD) superfamily of aspartate-dependent hydrolases. Members are found on the outer membrane of Gram-negative bacteria and the cytoplasmic membrane of Gram-positive bacteria. Most members have classic lipoprotein signal sequences. A critical role of this 5'-nucleotidase in Haemophilus influenzae is the degradation of external riboside in order to allow transport into the cell. An earlier suggested role in hemin transport is no longer current. This enzyme may also have other physiologically significant roles.

>PLN02645 phosphoglycolate phosphatase

Probab=98.35  E-value=2.1e-06  Score=75.46  Aligned_cols=80  Identities=16%  Similarity=0.214  Sum_probs=61.8

Q ss_pred             CCCCChHHHHhhccCCcEEEEECCCcccccchHHHHHHHcCCCccHHHHHHHHhCCCCCHHHHHHHHHhccCCCHHHHHH
Q 028799           68 ENTLPSKEVLQLWRTADAVCFDVDSTVCVDEGIDELAEFCGAGKAVAEWTARAMGGSVPFEEALAARLSLFKPSLSQVQD  147 (203)
Q Consensus        68 ~~~~~~~~~~~~~~~~kaVIFD~DGTLiDse~~~~la~~~G~~~~~~~~~~~~~gG~~~~~e~l~~~~~~~~~~~e~l~~  147 (203)
                      +...+.+++.++...+++++||+||||++.                        +                         
T Consensus        13 ~~~~~~~~~~~~~~~~~~~~~D~DGtl~~~------------------------~-------------------------   43 (311)
T PLN02645         13 AQLLTLENADELIDSVETFIFDCDGVIWKG------------------------D-------------------------   43 (311)
T ss_pred             cccCCHHHHHHHHHhCCEEEEeCcCCeEeC------------------------C-------------------------
Confidence            455566778888889999999999999762                        0                         


Q ss_pred             HHHhCCCCCCCcHHHHHHHHHHCCCeEEEEcCCCH---HHHHHHH-HcCCCccceEEecC
Q 028799          148 FLEKRPPRLSPGIDELVKKLKANNKNVYLISGGFR---HMINILN-ILKWDVLKVIQITS  203 (203)
Q Consensus       148 ~~~~~~~~l~PG~~elL~~Lk~~G~~vaIVTn~~~---~~i~~ll-~lGL~~~~~i~it~  203 (203)
                             .++||+.+.|+.|+++|++++++||++.   ..+..-+ .+|++....-++||
T Consensus        44 -------~~~~ga~e~l~~lr~~g~~~~~~TN~~~~~~~~~~~~l~~lGi~~~~~~I~ts   96 (311)
T PLN02645         44 -------KLIEGVPETLDMLRSMGKKLVFVTNNSTKSRAQYGKKFESLGLNVTEEEIFSS   96 (311)
T ss_pred             -------ccCcCHHHHHHHHHHCCCEEEEEeCCCCCCHHHHHHHHHHCCCCCChhhEeeh
Confidence                   2479999999999999999999999883   3333344 88987766666664

>TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain

Probab=98.34  E-value=2e-06  Score=67.37  Aligned_cols=41  Identities=22%  Similarity=0.186  Sum_probs=35.2

Q ss_pred             CCCCcHHHHHHHHHHCCCeEEEEcCCCH---------------HHHHHHH-HcCCCc
Q 028799          155 RLSPGIDELVKKLKANNKNVYLISGGFR---------------HMINILN-ILKWDV  195 (203)
Q Consensus       155 ~l~PG~~elL~~Lk~~G~~vaIVTn~~~---------------~~i~~ll-~lGL~~  195 (203)
                      +++||+.++|++|+++|++++|+||+.+               ..+..++ ++|+..
T Consensus        27 ~~~~g~~~~l~~Lk~~g~~~~I~Sn~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~   83 (147)
T TIGR01656        27 QLRPGAVPALLTLRAAGYTVVVVTNQSGIGRGYFSAEAFRAPNGRVLELLRQLGVAV   83 (147)
T ss_pred             EEcCChHHHHHHHHHCCCEEEEEeCCCcccCCcCCHHHHHHHHHHHHHHHHhCCCce
Confidence            5799999999999999999999999884               4556677 888863

This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3.

>KOG3085 consensus Predicted hydrolase (HAD superfamily) [General function prediction only]

Probab=98.28  E-value=4.6e-06  Score=70.94  Aligned_cols=122  Identities=17%  Similarity=0.146  Sum_probs=77.3

Q ss_pred             cCCcEEEEECCCcccccc-----hHHHHHHHcCCCccHHHH---HHH-H------------hCCCCCHHHHHHHHHhc-c
Q 028799           81 RTADAVCFDVDSTVCVDE-----GIDELAEFCGAGKAVAEW---TAR-A------------MGGSVPFEEALAARLSL-F  138 (203)
Q Consensus        81 ~~~kaVIFD~DGTLiDse-----~~~~la~~~G~~~~~~~~---~~~-~------------~gG~~~~~e~l~~~~~~-~  138 (203)
                      ..+++|+||++|||+.+.     .+..+++.+|.+.....+   ... +            ..|.++..+.....+.. +
T Consensus         5 ~~iravtfD~~~tLl~~~~~~~~~y~~i~~~~gl~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~l~~~~ww~~lv~~~f   84 (237)
T KOG3085|consen    5 MRIRAVTFDAGGTLLATLPPVMEVYCEIAEAYGLEYDDSLIETIFRKDFKKMSEKGPFFGLYSGELTLSQWWPKLVESTF   84 (237)
T ss_pred             cceEEEEEeCCCceeecCCccHHHHHHHHHHhCCCCCHHHHhHhhhHHHHhhcccCCcccccCCcccHHHHHHHHHHHHh
Confidence            457899999999999843     266788888887322111   111 1            11334444433322221 1


Q ss_pred             C--C--CHHHHHH-----HHHh---CCCCCCCcHHHHHHHHHHCCCeEEEEcCCCHHHHHHHH-HcCCCccceEEecC
Q 028799          139 K--P--SLSQVQD-----FLEK---RPPRLSPGIDELVKKLKANNKNVYLISGGFRHMINILN-ILKWDVLKVIQITS  203 (203)
Q Consensus       139 ~--~--~~e~l~~-----~~~~---~~~~l~PG~~elL~~Lk~~G~~vaIVTn~~~~~i~~ll-~lGL~~~~~i~it~  203 (203)
                      .  +  ..++..+     .+..   ......+|+.++++.||++|..++++||..... +.++ .+|+..+++.+++|
T Consensus        85 ~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~lq~lR~~g~~l~iisN~d~r~-~~~l~~~~l~~~fD~vv~S  161 (237)
T KOG3085|consen   85 GKAGIDYEEELLENFSFRLFSTFAPSAWKYLDGMQELLQKLRKKGTILGIISNFDDRL-RLLLLPLGLSAYFDFVVES  161 (237)
T ss_pred             ccccchhHHHHHhhhhhheeccccccCceeccHHHHHHHHHHhCCeEEEEecCCcHHH-HHHhhccCHHHhhhhhhhh
Confidence            1  1  1222222     1222   135788999999999999999999999988765 4667 99999888888876

>TIGR01691 enolase-ppase 2,3-diketo-5-methylthio-1-phosphopentane phosphatase

Probab=98.24  E-value=2.8e-05  Score=65.47  Aligned_cols=39  Identities=13%  Similarity=0.074  Sum_probs=35.1

Q ss_pred             CCCCCCcHHHHHHHHHHCCCeEEEEcCCCHHHHHHHH-Hc
Q 028799          153 PPRLSPGIDELVKKLKANNKNVYLISGGFRHMINILN-IL  191 (203)
Q Consensus       153 ~~~l~PG~~elL~~Lk~~G~~vaIVTn~~~~~i~~ll-~l  191 (203)
                      ...++||+.++|+.|+++|++++|+||++...++.++ +.
T Consensus        93 ~~~lypgv~e~L~~Lk~~G~~l~I~Sn~s~~~~~~~~~~~  132 (220)
T TIGR01691        93 TSHLYPDVPPALEAWLQLGLRLAVYSSGSVPAQKLLFGHS  132 (220)
T ss_pred             ccCcCcCHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHhhc
Confidence            3579999999999999999999999999998887777 65

This enzyme is the enolase-phosphatase of methionine salvage, a pathway that regenerates methionine from methylthioadenosine (MTA). Adenosylmethionine (AdoMet) is a donor of different moieties for various processes, including methylation reactions. Use of AdoMet for spermidine biosynthesis, which leads to polyamine biosynthesis, leaves MTA as a by-product that must be cleared. In Bacillus subtilis and related species, this single protein is replaced by separate enzymes with enolase and phosphatase activities.

>PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated

Probab=98.21  E-value=4.7e-06  Score=67.21  Aligned_cols=28  Identities=21%  Similarity=0.140  Sum_probs=26.2

Q ss_pred             CCCCCcHHHHHHHHHHCCCeEEEEcCCC
Q 028799          154 PRLSPGIDELVKKLKANNKNVYLISGGF  181 (203)
Q Consensus       154 ~~l~PG~~elL~~Lk~~G~~vaIVTn~~  181 (203)
                      ..++||+.++|++|+++|++++|+||+.
T Consensus        28 ~~~~pgv~e~L~~Lk~~g~~l~I~Tn~~   55 (181)
T PRK08942         28 WIPIPGSIEAIARLKQAGYRVVVATNQS   55 (181)
T ss_pred             eEECCCHHHHHHHHHHCCCEEEEEeCCc
Confidence            3689999999999999999999999987

>PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase)

Probab=98.15  E-value=4.4e-06  Score=67.64  Aligned_cols=42  Identities=21%  Similarity=0.272  Sum_probs=39.4

Q ss_pred             CCCCCcHHHHHHHHHHCCCeEEEEcCCCHHHHHHHH-HcCCCc
Q 028799          154 PRLSPGIDELVKKLKANNKNVYLISGGFRHMINILN-ILKWDV  195 (203)
Q Consensus       154 ~~l~PG~~elL~~Lk~~G~~vaIVTn~~~~~i~~ll-~lGL~~  195 (203)
                      .+++||+.++|+.|++.|++++|+||.....+..+. .+|+..
T Consensus       126 d~~~~~~~~~l~~L~~~Gi~~~i~TGD~~~~a~~~~~~lgi~~  168 (215)
T PF00702_consen  126 DPLRPGAKEALQELKEAGIKVAILTGDNESTASAIAKQLGIFD  168 (215)
T ss_dssp             EEBHTTHHHHHHHHHHTTEEEEEEESSEHHHHHHHHHHTTSCS
T ss_pred             CcchhhhhhhhhhhhccCcceeeeecccccccccccccccccc
Confidence            468999999999999999999999999999999999 999965

This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J ....

>PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed

Probab=98.01  E-value=2.2e-05  Score=67.35  Aligned_cols=42  Identities=14%  Similarity=0.056  Sum_probs=35.2

Q ss_pred             CCcHHHHHHHHHHCCCeEEEEcCCCHHHHHHHH-HcCCCccce
Q 028799          157 SPGIDELVKKLKANNKNVYLISGGFRHMINILN-ILKWDVLKV  198 (203)
Q Consensus       157 ~PG~~elL~~Lk~~G~~vaIVTn~~~~~i~~ll-~lGL~~~~~  198 (203)
                      .|++.+.|+.|+++|++++|+||.+...+..++ .+|+..+++
T Consensus        23 ~~~~~~ai~~l~~~Gi~~~iaTgR~~~~~~~~~~~l~l~~~~i   65 (273)
T PRK00192         23 YEPAKPALKALKEKGIPVIPCTSKTAAEVEVLRKELGLEDPFI   65 (273)
T ss_pred             cHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCEE
Confidence            345677888899999999999999999999988 999876543

>PRK01158 phosphoglycolate phosphatase; Provisional

Probab=97.95  E-value=3e-05  Score=64.14  Aligned_cols=39  Identities=13%  Similarity=0.037  Sum_probs=31.3

Q ss_pred             CcHHHHHHHHHHCCCeEEEEcCCCHHHHHHHH-HcCCCcc
Q 028799          158 PGIDELVKKLKANNKNVYLISGGFRHMINILN-ILKWDVL  196 (203)
Q Consensus       158 PG~~elL~~Lk~~G~~vaIVTn~~~~~i~~ll-~lGL~~~  196 (203)
                      |...+.|+.|+++|++++++|+.+...+..++ .+|++.+
T Consensus        23 ~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~   62 (230)
T PRK01158         23 LKAVEAIRKAEKLGIPVILATGNVLCFARAAAKLIGTSGP   62 (230)
T ss_pred             HHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHhCCCCc
Confidence            34456677788899999999999999888888 8888754

>KOG3109 consensus Haloacid dehalogenase-like hydrolase [General function prediction only]

Probab=97.92  E-value=9.8e-05  Score=62.09  Aligned_cols=115  Identities=16%  Similarity=0.149  Sum_probs=72.5

Q ss_pred             CCcEEEEECCCcccccch-HH---------HHHHHcCCCccHH-HHHHHHhCCCCCHHHHHHHHHhccCC-CHHHHHHHH
Q 028799           82 TADAVCFDVDSTVCVDEG-ID---------ELAEFCGAGKAVA-EWTARAMGGSVPFEEALAARLSLFKP-SLSQVQDFL  149 (203)
Q Consensus        82 ~~kaVIFD~DGTLiDse~-~~---------~la~~~G~~~~~~-~~~~~~~gG~~~~~e~l~~~~~~~~~-~~e~l~~~~  149 (203)
                      +++.++||+|.||+...+ ++         .+.+++|++++.. .+...+..   .+--+++.....-.. +.+++.++.
T Consensus        14 ~~~~l~FDiDdtLYp~St~i~~~~~~nI~~f~~eklgi~~e~a~~L~~~~yk---~YG~t~aGL~~~~~~~d~deY~~~V   90 (244)
T KOG3109|consen   14 NYKCLFFDIDDTLYPLSTGIQLMMRNNIQEFFVEKLGISEEEAEELRESLYK---EYGLTMAGLKAVGYIFDADEYHRFV   90 (244)
T ss_pred             cceEEEEecccccccCchhHHHHHHHHHHHHHHHHhCCChhhhHHHHHHHHH---HHhHHHHHHHHhcccCCHHHHHHHh
Confidence            889999999999998643 32         3445678874321 11111110   000111111111111 356666655


Q ss_pred             HhC----CCCCCCcHHHHHHHHHHCCCeEEEEcCCCHHHHHHHH-HcCCCccceEEe
Q 028799          150 EKR----PPRLSPGIDELVKKLKANNKNVYLISGGFRHMINILN-ILKWDVLKVIQI  201 (203)
Q Consensus       150 ~~~----~~~l~PG~~elL~~Lk~~G~~vaIVTn~~~~~i~~ll-~lGL~~~~~i~i  201 (203)
                      ...    .++|-|-..++|-.|+.++  ..+.||+.+.-+.+++ .+|+.++|.-+|
T Consensus        91 ~~~LPlq~LkPD~~LRnlLL~l~~r~--k~~FTNa~k~HA~r~Lk~LGieDcFegii  145 (244)
T KOG3109|consen   91 HGRLPLQDLKPDPVLRNLLLSLKKRR--KWIFTNAYKVHAIRILKKLGIEDCFEGII  145 (244)
T ss_pred             hccCcHhhcCCCHHHHHHHHhCcccc--EEEecCCcHHHHHHHHHHhChHHhcccee
Confidence            421    2677777889999998775  8999999999999999 999998876554

>TIGR01675 plant-AP plant acid phosphatase

Probab=97.89  E-value=0.00013  Score=61.92  Aligned_cols=86  Identities=20%  Similarity=0.128  Sum_probs=58.3

Q ss_pred             CCcEEEEECCCcccccchHHHHHHHcCCCccHHHHHHHHhCCCCCHHHHHHHHHhccCCCHHHHHHHHHhCCCCCCCcHH
Q 028799           82 TADAVCFDVDSTVCVDEGIDELAEFCGAGKAVAEWTARAMGGSVPFEEALAARLSLFKPSLSQVQDFLEKRPPRLSPGID  161 (203)
Q Consensus        82 ~~kaVIFD~DGTLiDse~~~~la~~~G~~~~~~~~~~~~~gG~~~~~e~l~~~~~~~~~~~e~l~~~~~~~~~~l~PG~~  161 (203)
                      ...+++||+|.|++++...... ..+|...               +             +...+.++......+..||+.
T Consensus        76 g~~A~V~DIDET~LsN~py~~~-~~~g~~~---------------~-------------~~~~~~~wv~~~~apaip~al  126 (229)
T TIGR01675        76 GMDAWIFDVDDTLLSNIPYYKK-HGYGTEK---------------T-------------DPTAFWLWLGKGAAPALPEGL  126 (229)
T ss_pred             CCcEEEEccccccccCHHHHHH-hccCCCc---------------C-------------CHHHHHHHHHcCCCCCCHHHH
Confidence            5679999999999996442111 1122110               0             111223333333568999999


Q ss_pred             HHHHHHHHCCCeEEEEcCCCHHH---HHHHH-HcCCCcc
Q 028799          162 ELVKKLKANNKNVYLISGGFRHM---INILN-ILKWDVL  196 (203)
Q Consensus       162 elL~~Lk~~G~~vaIVTn~~~~~---i~~ll-~lGL~~~  196 (203)
                      ++++.|+++|++++++||-+...   +...| ..|++.+
T Consensus       127 ~l~~~l~~~G~~Vf~lTGR~e~~r~~T~~nL~~~G~~~~  165 (229)
T TIGR01675       127 KLYQKIIELGIKIFLLSGRWEELRNATLDNLINAGFTGW  165 (229)
T ss_pred             HHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHHcCCCCc
Confidence            99999999999999999998665   55666 8888754

This model explicitly excludes the VSPs which lack the nucleophilc aspartate. The possibility exists, however, that some members of this family may, while containing all of the conserved HAD-superfamily catalytic residues, lack activity and have a function related to the function of the VSPs rather than the acid phosphatases.

>PF06941 NT5C: 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C); InterPro: IPR010708 This family consists of several 5' nucleotidase, deoxy (Pyrimidine), and cytosolic type C (NT5C) proteins

Probab=97.86  E-value=2.4e-05  Score=63.77  Aligned_cols=88  Identities=18%  Similarity=0.235  Sum_probs=46.0

Q ss_pred             EEEECCCcccccch-H-HHHHHHcCCCcc--HHHHHHHHhCCCCCHHHHHHHHHhccCC-CHHHHHHHHHh----CCCCC
Q 028799           86 VCFDVDSTVCVDEG-I-DELAEFCGAGKA--VAEWTARAMGGSVPFEEALAARLSLFKP-SLSQVQDFLEK----RPPRL  156 (203)
Q Consensus        86 VIFD~DGTLiDse~-~-~~la~~~G~~~~--~~~~~~~~~gG~~~~~e~l~~~~~~~~~-~~e~l~~~~~~----~~~~l  156 (203)
                      |++||||||.|... + ..+-+.+|....  ..+.     .+ ....+    .++.... ..+.+.+++.+    ...++
T Consensus         5 I~iDiDgVLad~~~~~~~~~n~~~~~~~~~~~~~~-----~~-~~~~~----~~g~~~~e~~~~~~~~~~~~~~f~~l~p   74 (191)
T PF06941_consen    5 IAIDIDGVLADFNSAFIEWFNEEFGKNPELTPEDI-----TG-YWDWE----KWGITEPEFYEKLWRFYEEPGFFSNLPP   74 (191)
T ss_dssp             EEEESBTTTB-HHHHHHHHHHHHTTTS----GGGG-----TS-SSHHH----HHHHHSTTHHHHHHHHHTSTTTTTT--B
T ss_pred             EEEECCCCCcccHHHHHHHHHHHcCCCCCCCHHHh-----hh-hhHHH----HhCCCCHHHHHHHHHHHhChhhhcCCCc
Confidence            88999999999864 3 334456665411  1111     00 01111    1111111 12333333331    14689


Q ss_pred             CCcHHHHHHHHHHCCCeEEEEcCCCHH
Q 028799          157 SPGIDELVKKLKANNKNVYLISGGFRH  183 (203)
Q Consensus       157 ~PG~~elL~~Lk~~G~~vaIVTn~~~~  183 (203)
                      +||+.|.|+.|++.|+.+.++|+.+..
T Consensus        75 ~~gA~e~l~~L~~~g~~~~~Itar~~~  101 (191)
T PF06941_consen   75 IPGAVEALKKLRDKGHEIVIITARPPE  101 (191)
T ss_dssp             -TTHHHHHHHHHTSTTEEEEEEE-SSS
T ss_pred             cHHHHHHHHHHHHcCCcEEEEEecCcc
Confidence            999999999999999888887777643

5'(3')-deoxyribonucleotidase is a ubiquitous enzyme in mammalian cells whose physiological function is not known [].; GO: 0016791 phosphatase activity; PDB: 1Z4M_A 1Q92_A 1Q91_A 1Z4J_A 1Z4I_A 1Z4Q_A 1Z4K_A 2JAW_A 1MH9_A 1Z4L_A ....

>TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal

Probab=97.86  E-value=5.1e-05  Score=62.56  Aligned_cols=40  Identities=18%  Similarity=0.144  Sum_probs=33.1

Q ss_pred             CCcHHHHHHHHHHCCCeEEEEcCCCHHHHHHHH-HcCCCcc
Q 028799          157 SPGIDELVKKLKANNKNVYLISGGFRHMINILN-ILKWDVL  196 (203)
Q Consensus       157 ~PG~~elL~~Lk~~G~~vaIVTn~~~~~i~~ll-~lGL~~~  196 (203)
                      .|...+.|+.|+++|++++++|+.+...+..+. .++++.+
T Consensus        20 ~~~~~~~i~~l~~~g~~~~~~TGR~~~~~~~~~~~l~~~~~   60 (215)
T TIGR01487        20 SERAIEAIRKAEKKGIPVSLVTGNTVPFARALAVLIGTSGP   60 (215)
T ss_pred             CHHHHHHHHHHHHCCCEEEEEcCCcchhHHHHHHHhCCCCc
Confidence            445577788889999999999999999888888 8888754

TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases.

>PF12689 Acid_PPase: Acid Phosphatase; InterPro: IPR010036 This entry represents two closely related clades of sequences from eukaryotes and archaea

Probab=97.82  E-value=4.7e-06  Score=67.54  Aligned_cols=42  Identities=21%  Similarity=0.248  Sum_probs=30.0

Q ss_pred             CCCCCCcHHHHHHHHHHCCCeEEEEcCCC-HHHHHHHH-HcCCC
Q 028799          153 PPRLSPGIDELVKKLKANNKNVYLISGGF-RHMINILN-ILKWD  194 (203)
Q Consensus       153 ~~~l~PG~~elL~~Lk~~G~~vaIVTn~~-~~~i~~ll-~lGL~  194 (203)
                      .+.++|++.+.|++|+.+|++++++|... ...++.++ .+++.
T Consensus        43 ~v~lypdv~~iL~~L~~~gv~lavASRt~~P~~A~~~L~~l~i~   86 (169)
T PF12689_consen   43 EVSLYPDVPEILQELKERGVKLAVASRTDEPDWARELLKLLEID   86 (169)
T ss_dssp             EE---TTHHHHHHHHHHCT--EEEEE--S-HHHHHHHHHHTT-C
T ss_pred             EEEeCcCHHHHHHHHHHCCCEEEEEECCCChHHHHHHHHhcCCC
Confidence            37899999999999999999999999655 45778888 99998

The mouse enzyme has been characterised as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues [, ].; GO: 0016791 phosphatase activity; PDB: 1U7P_A 1U7O_A 2WM8_A.

>smart00775 LNS2 LNS2 domain

Probab=97.81  E-value=4.7e-05  Score=60.74  Aligned_cols=34  Identities=12%  Similarity=0.243  Sum_probs=29.7

Q ss_pred             CCCcHHHHHHHHHHCCCeEEEEcCCCHHHHH---HHH
Q 028799          156 LSPGIDELVKKLKANNKNVYLISGGFRHMIN---ILN  189 (203)
Q Consensus       156 l~PG~~elL~~Lk~~G~~vaIVTn~~~~~i~---~ll  189 (203)
                      ..||+.++++.++++|++++++|+.+...+.   .++
T Consensus        28 ~~~~~~~a~~~l~~~G~~ivy~TGRp~~~~~~t~~~l   64 (157)
T smart00775       28 THPGVAKLYRDIQNNGYKILYLTARPIGQADRTRSYL   64 (157)
T ss_pred             CCHHHHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHHH
Confidence            4699999999999999999999999988764   555

This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins. SMP2 is involved in plasmid maintenance and respiration. Lipin proteins are involved in adipose tissue development and insulin resistance.

>PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional

Probab=97.79  E-value=7.8e-05  Score=63.61  Aligned_cols=36  Identities=11%  Similarity=0.159  Sum_probs=28.3

Q ss_pred             HHHHHHHHHCCCeEEEEcCCCHHHHHHHH-HcCCCcc
Q 028799          161 DELVKKLKANNKNVYLISGGFRHMINILN-ILKWDVL  196 (203)
Q Consensus       161 ~elL~~Lk~~G~~vaIVTn~~~~~i~~ll-~lGL~~~  196 (203)
                      .+.|+.|+++|++++++|+.+...+..++ .++++.+
T Consensus        25 ~~ai~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~   61 (272)
T PRK15126         25 LSTLARLRERDITLTFATGRHVLEMQHILGALSLDAY   61 (272)
T ss_pred             HHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCc
Confidence            45566777888999999998888888888 8887654

>TIGR01663 PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase

Probab=97.78  E-value=9.2e-05  Score=69.73  Aligned_cols=39  Identities=21%  Similarity=0.229  Sum_probs=34.8

Q ss_pred             CCCcHHHHHHHHHHCCCeEEEEcCCCH------------HHHHHHH-HcCCC
Q 028799          156 LSPGIDELVKKLKANNKNVYLISGGFR------------HMINILN-ILKWD  194 (203)
Q Consensus       156 l~PG~~elL~~Lk~~G~~vaIVTn~~~------------~~i~~ll-~lGL~  194 (203)
                      ++||+.+.|+.|++.|++++|+||...            ..++.++ .+|+.
T Consensus       198 l~pgV~e~L~~L~~~Gy~IvIvTNQ~gI~~G~~~~~~~~~ki~~iL~~lgip  249 (526)
T TIGR01663       198 IFPEIPEKLKELEADGFKICIFTNQGGIARGKINADDFKAKIEAIVAKLGVP  249 (526)
T ss_pred             cccCHHHHHHHHHHCCCEEEEEECCcccccCcccHHHHHHHHHHHHHHcCCc
Confidence            689999999999999999999999776            4577788 99986

Note that the EC number for the kinase function is: 2.7.1.78

>PRK10976 putative hydrolase; Provisional

Probab=97.77  E-value=8.7e-05  Score=62.98  Aligned_cols=36  Identities=17%  Similarity=0.183  Sum_probs=27.5

Q ss_pred             HHHHHHHHHCCCeEEEEcCCCHHHHHHHH-HcCCCcc
Q 028799          161 DELVKKLKANNKNVYLISGGFRHMINILN-ILKWDVL  196 (203)
Q Consensus       161 ~elL~~Lk~~G~~vaIVTn~~~~~i~~ll-~lGL~~~  196 (203)
                      .+.|+.++++|++++|+|+.+...+..++ .+|++.+
T Consensus        25 ~~ai~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~   61 (266)
T PRK10976         25 KETLKLLTARGIHFVFATGRHHVDVGQIRDNLEIKSY   61 (266)
T ss_pred             HHHHHHHHHCCCEEEEEcCCChHHHHHHHHhcCCCCe
Confidence            45566777888888888888888887777 8887653

>PRK10444 UMP phosphatase; Provisional

Probab=97.73  E-value=5.7e-05  Score=64.53  Aligned_cols=48  Identities=17%  Similarity=0.097  Sum_probs=34.3

Q ss_pred             CCCcHHHHHHHHHHCCCeEEEEcCCCHHHHHH---HH-HcCCCccceEEecC
Q 028799          156 LSPGIDELVKKLKANNKNVYLISGGFRHMINI---LN-ILKWDVLKVIQITS  203 (203)
Q Consensus       156 l~PG~~elL~~Lk~~G~~vaIVTn~~~~~i~~---ll-~lGL~~~~~i~it~  203 (203)
                      +.||+.+.++.|+++|.+++++||.+......   .+ .+|++.-..-++||
T Consensus        18 ~~p~a~~~l~~L~~~g~~~~~~Tn~~~~~~~~~~~~l~~~G~~~~~~~i~ts   69 (248)
T PRK10444         18 AVPGAAEFLHRILDKGLPLVLLTNYPSQTGQDLANRFATAGVDVPDSVFYTS   69 (248)
T ss_pred             eCccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCCCHhhEecH
Confidence            47888999999999999999999988754433   23 67875444444554

>COG0647 NagD Predicted sugar phosphatases of the HAD superfamily [Carbohydrate transport and metabolism]

Probab=97.71  E-value=5.8e-05  Score=65.45  Aligned_cols=49  Identities=29%  Similarity=0.241  Sum_probs=37.5

Q ss_pred             CCCCcHHHHHHHHHHCCCeEEEEcCCCHHHHH----HHHH-cCCCccceEEecC
Q 028799          155 RLSPGIDELVKKLKANNKNVYLISGGFRHMIN----ILNI-LKWDVLKVIQITS  203 (203)
Q Consensus       155 ~l~PG~~elL~~Lk~~G~~vaIVTn~~~~~i~----~ll~-lGL~~~~~i~it~  203 (203)
                      .++||+.++|+.|+++|.++.++||+++..-+    .+.. .+++.-..-++||
T Consensus        24 ~~ipga~e~l~~L~~~g~~~iflTNn~~~s~~~~~~~L~~~~~~~~~~~~i~TS   77 (269)
T COG0647          24 EAIPGAAEALKRLKAAGKPVIFLTNNSTRSREVVAARLSSLGGVDVTPDDIVTS   77 (269)
T ss_pred             ccCchHHHHHHHHHHcCCeEEEEeCCCCCCHHHHHHHHHhhcCCCCCHHHeecH
Confidence            46899999999999999999999999865433    3334 6666666666665

>PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional

Probab=97.70  E-value=0.00014  Score=61.58  Aligned_cols=35  Identities=17%  Similarity=0.252  Sum_probs=27.8

Q ss_pred             HHHHHHHHHCCCeEEEEcCCCHHHHHHHH-HcCCCc
Q 028799          161 DELVKKLKANNKNVYLISGGFRHMINILN-ILKWDV  195 (203)
Q Consensus       161 ~elL~~Lk~~G~~vaIVTn~~~~~i~~ll-~lGL~~  195 (203)
                      .+.|+.++++|++++|+|+.+...+..++ .++++.
T Consensus        26 ~~ai~~~~~~G~~~~iaTGR~~~~~~~~~~~l~~~~   61 (272)
T PRK10530         26 LEALARAREAGYKVIIVTGRHHVAIHPFYQALALDT   61 (272)
T ss_pred             HHHHHHHHHCCCEEEEEcCCChHHHHHHHHhcCCCC
Confidence            45566778889999999998888888877 888764

>TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family

Probab=97.69  E-value=0.00013  Score=62.92  Aligned_cols=47  Identities=19%  Similarity=0.278  Sum_probs=33.6

Q ss_pred             CCCcHHHHHHHHHHCCCeEEEEcCCC---HHHHHHHH-HcCCCccceEEec
Q 028799          156 LSPGIDELVKKLKANNKNVYLISGGF---RHMINILN-ILKWDVLKVIQIT  202 (203)
Q Consensus       156 l~PG~~elL~~Lk~~G~~vaIVTn~~---~~~i~~ll-~lGL~~~~~i~it  202 (203)
                      ++||+.++|+.|+++|++++++||++   +......+ .+|+.....-++|
T Consensus        19 ~~~ga~e~l~~L~~~g~~~~~~Tnns~~~~~~~~~~l~~~G~~~~~~~i~t   69 (279)
T TIGR01452        19 VVPGAPELLDRLARAGKAALFVTNNSTKSRAEYALKFARLGFNGLAEQLFS   69 (279)
T ss_pred             eCcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCCChhhEec
Confidence            57889999999999999999999965   33333345 8888654433444

This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association.

>COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only]

Probab=97.68  E-value=0.00014  Score=61.67  Aligned_cols=37  Identities=19%  Similarity=0.116  Sum_probs=31.1

Q ss_pred             HHHHHHHHHHCCCeEEEEcCCCHHHHHHHH-HcCCCcc
Q 028799          160 IDELVKKLKANNKNVYLISGGFRHMINILN-ILKWDVL  196 (203)
Q Consensus       160 ~~elL~~Lk~~G~~vaIVTn~~~~~i~~ll-~lGL~~~  196 (203)
                      ..+.|+.++++|++++|+|+.+...+..++ .++++.+
T Consensus        25 ~~~al~~~~~~g~~v~iaTGR~~~~~~~~~~~l~~~~~   62 (264)
T COG0561          25 TKEALARLREKGVKVVLATGRPLPDVLSILEELGLDGP   62 (264)
T ss_pred             HHHHHHHHHHCCCEEEEECCCChHHHHHHHHHcCCCcc
Confidence            355666788899999999999999899998 9998863

>PRK10513 sugar phosphate phosphatase; Provisional

Probab=97.67  E-value=0.00015  Score=61.58  Aligned_cols=35  Identities=17%  Similarity=0.139  Sum_probs=28.8

Q ss_pred             HHHHHHHHHCCCeEEEEcCCCHHHHHHHH-HcCCCc
Q 028799          161 DELVKKLKANNKNVYLISGGFRHMINILN-ILKWDV  195 (203)
Q Consensus       161 ~elL~~Lk~~G~~vaIVTn~~~~~i~~ll-~lGL~~  195 (203)
                      .+.|+.|+++|++++|+|+.+...+..++ .++++.
T Consensus        26 ~~ai~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~   61 (270)
T PRK10513         26 KQAIAAARAKGVNVVLTTGRPYAGVHRYLKELHMEQ   61 (270)
T ss_pred             HHHHHHHHHCCCEEEEecCCChHHHHHHHHHhCCCC
Confidence            45667778899999999999998888888 888753

>smart00577 CPDc catalytic domain of ctd-like phosphatases

Probab=97.61  E-value=0.0001  Score=57.82  Aligned_cols=48  Identities=17%  Similarity=0.306  Sum_probs=41.3

Q ss_pred             CCCCCcHHHHHHHHHHCCCeEEEEcCCCHHHHHHHH-HcCCCc-cceEEec
Q 028799          154 PRLSPGIDELVKKLKANNKNVYLISGGFRHMINILN-ILKWDV-LKVIQIT  202 (203)
Q Consensus       154 ~~l~PG~~elL~~Lk~~G~~vaIVTn~~~~~i~~ll-~lGL~~-~~~i~it  202 (203)
                      +.++||+.++|++|+ ++++++|+||+.+..++.++ ++|+.. ++..+++
T Consensus        44 v~l~pG~~e~L~~L~-~~~~l~I~Ts~~~~~~~~il~~l~~~~~~f~~i~~   93 (148)
T smart00577       44 VKKRPGVDEFLKRAS-ELFELVVFTAGLRMYADPVLDLLDPKKYFGYRRLF   93 (148)
T ss_pred             EEECCCHHHHHHHHH-hccEEEEEeCCcHHHHHHHHHHhCcCCCEeeeEEE
Confidence            578999999999998 67999999999999999999 999854 5455554

>PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed

Probab=97.60  E-value=0.00024  Score=62.36  Aligned_cols=38  Identities=16%  Similarity=0.069  Sum_probs=32.1

Q ss_pred             HHHHHHHHHHCCCeEEEEcCCCHHHHHHHH-HcCCCccc
Q 028799          160 IDELVKKLKANNKNVYLISGGFRHMINILN-ILKWDVLK  197 (203)
Q Consensus       160 ~~elL~~Lk~~G~~vaIVTn~~~~~i~~ll-~lGL~~~~  197 (203)
                      +.+.|+.|+++|++++++|+.....+..+. .++++..+
T Consensus        23 a~~aL~~Lk~~GI~vVlaTGRt~~ev~~l~~~Lgl~~p~   61 (302)
T PRK12702         23 ARQALAALERRSIPLVLYSLRTRAQLEHLCRQLRLEHPF   61 (302)
T ss_pred             HHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHhCCCCeE
Confidence            355677888999999999999999999998 99987643

>PHA02530 pseT polynucleotide kinase; Provisional

Probab=97.58  E-value=9.2e-05  Score=63.98  Aligned_cols=42  Identities=24%  Similarity=0.154  Sum_probs=38.8

Q ss_pred             CCCCCcHHHHHHHHHHCCCeEEEEcCCCHHHHHHHH-HcCCCc
Q 028799          154 PRLSPGIDELVKKLKANNKNVYLISGGFRHMINILN-ILKWDV  195 (203)
Q Consensus       154 ~~l~PG~~elL~~Lk~~G~~vaIVTn~~~~~i~~ll-~lGL~~  195 (203)
                      ..++||+.++|+.|+++|++++++||++....+..+ .+|+..
T Consensus       186 ~~~~~~~~~~l~~l~~~g~~i~i~T~r~~~~~~~~l~~l~~~~  228 (300)
T PHA02530        186 DKPNPMVVELVKMYKAAGYEIIVVSGRDGVCEEDTVEWLRQTD  228 (300)
T ss_pred             CCCChhHHHHHHHHHhCCCEEEEEeCCChhhHHHHHHHHHHcC
Confidence            478999999999999999999999999999998888 888875

>PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional

Probab=97.58  E-value=0.00018  Score=64.77  Aligned_cols=41  Identities=10%  Similarity=0.152  Sum_probs=34.9

Q ss_pred             CCCCCcHHHHHHHHHHCCCeEEEEcCC---------------CHHHHHHHH-HcCCC
Q 028799          154 PRLSPGIDELVKKLKANNKNVYLISGG---------------FRHMINILN-ILKWD  194 (203)
Q Consensus       154 ~~l~PG~~elL~~Lk~~G~~vaIVTn~---------------~~~~i~~ll-~lGL~  194 (203)
                      ..++||+.++|++|+++|++++|+||+               +...+..++ .+|+.
T Consensus        29 ~~l~pGV~e~L~~Lk~~G~kL~IvTNq~g~G~~~~~~~~l~~~~~~i~~iL~~~gl~   85 (354)
T PRK05446         29 LAFEPGVIPALLKLQKAGYKLVMVTNQDGLGTDSFPQEDFDPPHNLMMQIFESQGIK   85 (354)
T ss_pred             ceECcCHHHHHHHHHhCCCeEEEEECCccccCccccHHHHhhHHHHHHHHHHHcCCc
Confidence            479999999999999999999999995               345566677 88885

>TIGR02244 HAD-IG-Ncltidse HAD superfamily (subfamily IG) hydrolase, 5'-nucleotidase

Probab=97.55  E-value=0.00012  Score=65.47  Aligned_cols=50  Identities=18%  Similarity=0.241  Sum_probs=45.8

Q ss_pred             CCCCCcHHHHHHHHHHCCCeEEEEcCCCHHHHHHHH-Hc-C-------CCccceEEecC
Q 028799          154 PRLSPGIDELVKKLKANNKNVYLISGGFRHMINILN-IL-K-------WDVLKVIQITS  203 (203)
Q Consensus       154 ~~l~PG~~elL~~Lk~~G~~vaIVTn~~~~~i~~ll-~l-G-------L~~~~~i~it~  203 (203)
                      +...||+.++|+.|+++|++++|+||++...++.++ .+ |       |..++..+||+
T Consensus       183 v~~~pgl~elL~~Lr~~G~klfLvTNS~~~yt~~im~~l~g~~~~~~~w~~yFD~IIt~  241 (343)
T TIGR02244       183 VLRDPKLPLFLSKLKEHGKKLFLLTNSDYDYTDKGMKYLLGPFLGEHDWRDYFDVVIVD  241 (343)
T ss_pred             hccchhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhhCCcccccchHhhCcEEEeC
Confidence            567999999999999999999999999999999999 75 7       88999988874

A TIGRFAMs model (TIGR01993) represents a (putative) family of _pyrimidine_ 5'-nucleotidases which are also subfamily I HAD's, which should not be confused with the current model.

>PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional

Probab=97.53  E-value=0.0001  Score=59.85  Aligned_cols=35  Identities=17%  Similarity=0.120  Sum_probs=29.7

Q ss_pred             HHHHHHHCCCeEEEEcCCCHHHHHHHH-HcCCCccc
Q 028799          163 LVKKLKANNKNVYLISGGFRHMINILN-ILKWDVLK  197 (203)
Q Consensus       163 lL~~Lk~~G~~vaIVTn~~~~~i~~ll-~lGL~~~~  197 (203)
                      .++.|+++|++++|+||.+...+..++ .+|+..++
T Consensus        56 ~i~~L~~~Gi~v~I~T~~~~~~v~~~l~~lgl~~~f   91 (183)
T PRK09484         56 GIRCLLTSGIEVAIITGRKSKLVEDRMTTLGITHLY   91 (183)
T ss_pred             HHHHHHHCCCEEEEEeCCCcHHHHHHHHHcCCceee
Confidence            556677899999999999999999998 99987654

>PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed

Probab=97.52  E-value=0.00034  Score=59.90  Aligned_cols=34  Identities=18%  Similarity=0.132  Sum_probs=28.1

Q ss_pred             HHHHHHHHHCCCeEEEEcCCCHHHHHHHH-HcCCC
Q 028799          161 DELVKKLKANNKNVYLISGGFRHMINILN-ILKWD  194 (203)
Q Consensus       161 ~elL~~Lk~~G~~vaIVTn~~~~~i~~ll-~lGL~  194 (203)
                      .+.|+.|+++|++++++|+.+...+.+++ .+|++
T Consensus        30 ~~ai~~l~~~Gi~~viaTGR~~~~i~~~~~~l~~~   64 (271)
T PRK03669         30 APWLTRLREAQVPVILCSSKTAAEMLPLQQTLGLQ   64 (271)
T ss_pred             HHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHhCCC
Confidence            45566778889999999999988888888 88885

>TIGR01680 Veg_Stor_Prot vegetative storage protein

Probab=97.42  E-value=0.0012  Score=57.26  Aligned_cols=43  Identities=12%  Similarity=0.076  Sum_probs=35.1

Q ss_pred             CCCCCCcHHHHHHHHHHCCCeEEEEcCCCHHH---HHHHH-HcCCCc
Q 028799          153 PPRLSPGIDELVKKLKANNKNVYLISGGFRHM---INILN-ILKWDV  195 (203)
Q Consensus       153 ~~~l~PG~~elL~~Lk~~G~~vaIVTn~~~~~---i~~ll-~lGL~~  195 (203)
                      ..+..||+.+++++++++|+++.++||.....   +...| ..|+..
T Consensus       143 ~ApAlp~al~ly~~l~~~G~kIf~VSgR~e~~r~aT~~NL~kaGy~~  189 (275)
T TIGR01680       143 EAPALPETLKNYNKLVSLGFKIIFLSGRLKDKQAVTEANLKKAGYHT  189 (275)
T ss_pred             cCCCChHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHHcCCCC
Confidence            46899999999999999999999999997542   33455 778754

The proteins represented by this model are close relatives of the plant acid phosphatases (TIGR01675), are limited to members of the Phaseoleae including Glycine max (soybean) and Phaseolus vulgaris (kidney bean). These proteins are highly expressed in the leaves of repeatedly depodded plants. VSP differs most strinkingly from the acid phosphatases in the lack of the conserved nucleophilic aspartate residue in the N-terminus, thus, they should be inactive as phosphatases. This issue was confused by the publication in 1992 of an article claiming activity for the Glycine max VSP. In 1994 this assertion was refuted by the separation of the activity from the VSP.

>TIGR01261 hisB_Nterm histidinol-phosphatase

Probab=97.41  E-value=0.00033  Score=56.10  Aligned_cols=47  Identities=13%  Similarity=0.113  Sum_probs=38.8

Q ss_pred             CCCCCcHHHHHHHHHHCCCeEEEEcCC---------------CHHHHHHHH-HcCCCccceEEe
Q 028799          154 PRLSPGIDELVKKLKANNKNVYLISGG---------------FRHMINILN-ILKWDVLKVIQI  201 (203)
Q Consensus       154 ~~l~PG~~elL~~Lk~~G~~vaIVTn~---------------~~~~i~~ll-~lGL~~~~~i~i  201 (203)
                      .+++||+.++|++|+++|++++|+||.               ....+..++ .+|+. +..+.+
T Consensus        28 ~~~~pgv~e~L~~L~~~g~~l~IvSN~~g~~~~~~~~~~~~~~~~~~~~~l~~~gl~-fd~ii~   90 (161)
T TIGR01261        28 LRFEKGVIPALLKLKKAGYKFVMVTNQDGLGTPSFPQADFDGPHNLMLQIFRSQGII-FDDVLI   90 (161)
T ss_pred             eeECCCHHHHHHHHHHCCCeEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHCCCc-eeEEEE
Confidence            478999999999999999999999997               355677888 99997 444443

This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis.

>PF03767 Acid_phosphat_B: HAD superfamily, subfamily IIIB (Acid phosphatase); InterPro: IPR005519 This family of class B acid phosphatases also contains a number of vegetative storage proteins (VPS25)

Probab=97.30  E-value=0.00019  Score=60.65  Aligned_cols=86  Identities=19%  Similarity=0.210  Sum_probs=54.5

Q ss_pred             cCCcEEEEECCCcccccchHHHHHHHcCCCccHHHHHHHHhCCCCCHHHHHHHHHhccCCCHHHHHHHHHhCCCCCCCcH
Q 028799           81 RTADAVCFDVDSTVCVDEGIDELAEFCGAGKAVAEWTARAMGGSVPFEEALAARLSLFKPSLSQVQDFLEKRPPRLSPGI  160 (203)
Q Consensus        81 ~~~kaVIFD~DGTLiDse~~~~la~~~G~~~~~~~~~~~~~gG~~~~~e~l~~~~~~~~~~~e~l~~~~~~~~~~l~PG~  160 (203)
                      .+..+|+||+|+|++++-.+..... ++..               .        +     +.+.+.++......+..||+
T Consensus        70 ~~~~avv~DIDeTvLsn~~y~~~~~-~~~~---------------~--------~-----~~~~w~~wv~~~~~~aip~a  120 (229)
T PF03767_consen   70 DKPPAVVFDIDETVLSNSPYYAYLI-FGGE---------------S--------F-----SPEDWDEWVASGKAPAIPGA  120 (229)
T ss_dssp             TSEEEEEEESBTTTEEHHHHHHHHH-HHTH---------------H--------H------CCHHHHHHHCTGGEEETTH
T ss_pred             CCCcEEEEECCcccccCHHHHHHHh-hccC---------------C--------C-----ChHHHHHHHhcccCcccHHH
Confidence            6788999999999997433211111 1100               0        0     00112233333234789999


Q ss_pred             HHHHHHHHHCCCeEEEEcCCCHH---HHHHHH-HcCCCc
Q 028799          161 DELVKKLKANNKNVYLISGGFRH---MINILN-ILKWDV  195 (203)
Q Consensus       161 ~elL~~Lk~~G~~vaIVTn~~~~---~i~~ll-~lGL~~  195 (203)
                      .+++++++++|++|+++||.+..   .+..-| ..|+..
T Consensus       121 ~~l~~~~~~~G~~V~~iT~R~~~~r~~T~~nL~~~G~~~  159 (229)
T PF03767_consen  121 LELYNYARSRGVKVFFITGRPESQREATEKNLKKAGFPG  159 (229)
T ss_dssp             HHHHHHHHHTTEEEEEEEEEETTCHHHHHHHHHHHTTST
T ss_pred             HHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHHcCCCc
Confidence            99999999999999999997654   333445 777744

The acid phosphatase activity of VPS has been experimentally demonstrated [].; GO: 0003993 acid phosphatase activity; PDB: 3PCT_C 2I34_A 2I33_A 1Z5U_D 1Z5G_A 2AUT_C 1Z88_B 3OCV_A 3OCZ_A 3OCX_A ....

>PTZ00174 phosphomannomutase; Provisional

Probab=97.27  E-value=0.00073  Score=57.26  Aligned_cols=18  Identities=28%  Similarity=0.276  Sum_probs=15.4

Q ss_pred             ccCCcEEEEECCCccccc
Q 028799           80 WRTADAVCFDVDSTVCVD   97 (203)
Q Consensus        80 ~~~~kaVIFD~DGTLiDs   97 (203)
                      ...+++++|||||||+++
T Consensus         2 ~~~~klia~DlDGTLL~~   19 (247)
T PTZ00174          2 EMKKTILLFDVDGTLTKP   19 (247)
T ss_pred             CCCCeEEEEECcCCCcCC
Confidence            356899999999999885

>PLN02177 glycerol-3-phosphate acyltransferase

Probab=97.19  E-value=0.0043  Score=58.26  Aligned_cols=41  Identities=20%  Similarity=0.213  Sum_probs=31.3

Q ss_pred             CCCCcHHHHHHHHHHCCCeEEEEcCCCHHHHHHHH-H-cCCCccceE
Q 028799          155 RLSPGIDELVKKLKANNKNVYLISGGFRHMINILN-I-LKWDVLKVI  199 (203)
Q Consensus       155 ~l~PG~~elL~~Lk~~G~~vaIVTn~~~~~i~~ll-~-lGL~~~~~i  199 (203)
                      .+.|.+.+.+   +++|.. +|+|++++.++++++ . +|++....+
T Consensus       110 ~l~~~a~~~~---~~~g~~-vvVSASp~~~Vepfa~~~LGid~VIgT  152 (497)
T PLN02177        110 DVHPETWRVF---NSFGKR-YIITASPRIMVEPFVKTFLGADKVLGT  152 (497)
T ss_pred             hcCHHHHHHH---HhCCCE-EEEECCcHHHHHHHHHHcCCCCEEEec
Confidence            3677666654   567765 999999999999999 5 899976443

>COG4996 Predicted phosphatase [General function prediction only]

Probab=97.15  E-value=0.00047  Score=53.90  Aligned_cols=50  Identities=16%  Similarity=0.005  Sum_probs=43.4

Q ss_pred             CCCCCCcHHHHHHHHHHCCCeEEEEcCCCHHHHHHHH-HcCCCccceEEec
Q 028799          153 PPRLSPGIDELVKKLKANNKNVYLISGGFRHMINILN-ILKWDVLKVIQIT  202 (203)
Q Consensus       153 ~~~l~PG~~elL~~Lk~~G~~vaIVTn~~~~~i~~ll-~lGL~~~~~i~it  202 (203)
                      .+.++|.+.++++++|+.|+-+..+|=.+.+.+-..+ .+++..++...+.
T Consensus        39 ev~L~~~v~~~l~warnsG~i~~~~sWN~~~kA~~aLral~~~~yFhy~Vi   89 (164)
T COG4996          39 EVHLFPDVKETLKWARNSGYILGLASWNFEDKAIKALRALDLLQYFHYIVI   89 (164)
T ss_pred             EEEEcHHHHHHHHHHHhCCcEEEEeecCchHHHHHHHHHhchhhhEEEEEe
Confidence            3689999999999999999999999988888777777 9999888776653

>TIGR01689 EcbF-BcbF capsule biosynthesis phosphatase

Probab=97.11  E-value=0.0016  Score=50.31  Aligned_cols=29  Identities=14%  Similarity=0.007  Sum_probs=23.1

Q ss_pred             CCCCcHHHHHHHHHHCCCeEEEEcCCCHH
Q 028799          155 RLSPGIDELVKKLKANNKNVYLISGGFRH  183 (203)
Q Consensus       155 ~l~PG~~elL~~Lk~~G~~vaIVTn~~~~  183 (203)
                      .+.+++.+.|+.++++|+.++++|+.+..
T Consensus        24 ~~~~~~ie~L~~l~~~G~~IiiaTGR~~~   52 (126)
T TIGR01689        24 APILAVIEKLRHYKALGFEIVISSSRNMR   52 (126)
T ss_pred             ccCHHHHHHHHHHHHCCCEEEEECCCCch
Confidence            35677788888888888999999888654

Due to the likelihood that the substrates of these enzymes are different depending on the nature of the particular polysaccharides associated with each species, this model has been classified as a subfamily despite the close homology.

>PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A

Probab=97.10  E-value=0.00083  Score=49.65  Aligned_cols=48  Identities=21%  Similarity=0.114  Sum_probs=33.6

Q ss_pred             CCCCcHHHHHHHHHHCCCeEEEEcCCCHHH---HHHHH-HcCCCccceEEec
Q 028799          155 RLSPGIDELVKKLKANNKNVYLISGGFRHM---INILN-ILKWDVLKVIQIT  202 (203)
Q Consensus       155 ~l~PG~~elL~~Lk~~G~~vaIVTn~~~~~---i~~ll-~lGL~~~~~i~it  202 (203)
                      .++||+.++++.|+++|.+++++||++...   ....+ .+|++.-..-++|
T Consensus        14 ~~ipga~e~l~~L~~~g~~~~~lTNns~~s~~~~~~~L~~~Gi~~~~~~i~t   65 (101)
T PF13344_consen   14 EPIPGAVEALDALRERGKPVVFLTNNSSRSREEYAKKLKKLGIPVDEDEIIT   65 (101)
T ss_dssp             EE-TTHHHHHHHHHHTTSEEEEEES-SSS-HHHHHHHHHHTTTT--GGGEEE
T ss_pred             CcCcCHHHHHHHHHHcCCCEEEEeCCCCCCHHHHHHHHHhcCcCCCcCEEEC
Confidence            579999999999999999999999998443   23344 8888754444444

...

>TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase

Probab=97.10  E-value=0.0012  Score=52.91  Aligned_cols=29  Identities=14%  Similarity=0.194  Sum_probs=27.1

Q ss_pred             CCCCCcHHHHHHHHHHCCCeEEEEcCCCH
Q 028799          154 PRLSPGIDELVKKLKANNKNVYLISGGFR  182 (203)
Q Consensus       154 ~~l~PG~~elL~~Lk~~G~~vaIVTn~~~  182 (203)
                      ..++||+.++|++|+++|++++|+||++.
T Consensus        25 ~~~~pgv~e~L~~Lk~~G~~l~i~TN~~~   53 (176)
T TIGR00213        25 FEFIDGVIDALRELKKMGYALVLVTNQSG   53 (176)
T ss_pred             eEECCCHHHHHHHHHHCCCEEEEEeCCcc
Confidence            46899999999999999999999999984

This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812).

>PLN02887 hydrolase family protein

Probab=97.09  E-value=0.0014  Score=62.61  Aligned_cols=35  Identities=11%  Similarity=0.123  Sum_probs=29.5

Q ss_pred             HHHHHHHHHHCCCeEEEEcCCCHHHHHHHH-HcCCC
Q 028799          160 IDELVKKLKANNKNVYLISGGFRHMINILN-ILKWD  194 (203)
Q Consensus       160 ~~elL~~Lk~~G~~vaIVTn~~~~~i~~ll-~lGL~  194 (203)
                      ..+.|+.++++|++++|+|+.+...+..++ .++++
T Consensus       330 t~eAI~kl~ekGi~~vIATGR~~~~i~~~l~~L~l~  365 (580)
T PLN02887        330 NAKALKEALSRGVKVVIATGKARPAVIDILKMVDLA  365 (580)
T ss_pred             HHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHhCcc
Confidence            356677888999999999999999888888 88875

>PRK06769 hypothetical protein; Validated

Probab=96.97  E-value=0.0014  Score=52.79  Aligned_cols=45  Identities=18%  Similarity=0.081  Sum_probs=35.0

Q ss_pred             CCCCCcHHHHHHHHHHCCCeEEEEcCCCHH--------HHHHHH-HcCCCccce
Q 028799          154 PRLSPGIDELVKKLKANNKNVYLISGGFRH--------MINILN-ILKWDVLKV  198 (203)
Q Consensus       154 ~~l~PG~~elL~~Lk~~G~~vaIVTn~~~~--------~i~~ll-~lGL~~~~~  198 (203)
                      ..++||+.++|++|+++|++++|+||+...        .....+ .+|++.++.
T Consensus        27 ~~~~pgv~e~L~~Lk~~G~~l~I~Tn~~~~~~~~~~~~~~~~~l~~~g~~~~~~   80 (173)
T PRK06769         27 FTLFPFTKASLQKLKANHIKIFSFTNQPGIADGIATIADFVQELKGFGFDDIYL   80 (173)
T ss_pred             eEECCCHHHHHHHHHHCCCEEEEEECCchhcCCcCCHHHHHHHHHhCCcCEEEE
Confidence            368999999999999999999999998742        122335 788876543

>TIGR01456 CECR5 HAD-superfamily class IIA hydrolase, TIGR01456, CECR5

Probab=96.92  E-value=0.0011  Score=58.48  Aligned_cols=15  Identities=20%  Similarity=0.450  Sum_probs=12.7

Q ss_pred             EEEEECCCcccccch
Q 028799           85 AVCFDVDSTVCVDEG   99 (203)
Q Consensus        85 aVIFD~DGTLiDse~   99 (203)
                      +++||+||||++++.
T Consensus         2 ~~ifD~DGvL~~g~~   16 (321)
T TIGR01456         2 GFAFDIDGVLFRGKK   16 (321)
T ss_pred             EEEEeCcCceECCcc
Confidence            689999999998643

The Schizosaccharomyces pombe sequence (EGAD|138276) is annotated as "phosphatidyl synthase," however this is due entirely to a C-terminal region of the protein (outside the region of similarity of this model) which is highly homologous to a family of CDP-alcohol phosphatidyltransferases. (Thus, the annotation of GP|4226073 from C. elegans as similar to phosphatidyl synthase, is a mistake as this gene does not contain the C-terminal portion). The physical connection of the phosphatidyl synthase and the HAD-superfamily hydrolase domain in S. pombe may, however, be an important clue to the substrate for the hydrolases in this equivalog.

>TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB

Probab=96.88  E-value=0.0025  Score=51.78  Aligned_cols=34  Identities=26%  Similarity=0.299  Sum_probs=26.8

Q ss_pred             CcHHHHHHHHHHCCCeEEEEcCCCHHHHHHHH-Hc
Q 028799          158 PGIDELVKKLKANNKNVYLISGGFRHMINILN-IL  191 (203)
Q Consensus       158 PG~~elL~~Lk~~G~~vaIVTn~~~~~i~~ll-~l  191 (203)
                      |.+.+.|+.|+++|++++++|+.....+..++ .+
T Consensus        20 ~~~~~~l~~l~~~g~~~~i~TGR~~~~~~~~~~~~   54 (204)
T TIGR01484        20 PETIEALERLREAGVKVVLVTGRSLAEIKELLKQL   54 (204)
T ss_pred             HHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHhC
Confidence            55567777888888888888888888888777 53

The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear.

>PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional

Probab=96.69  E-value=0.0045  Score=59.96  Aligned_cols=35  Identities=11%  Similarity=0.010  Sum_probs=28.3

Q ss_pred             HHHHHHHHHCCCeEEEEcCCCHHHHHHHH-HcCCCc
Q 028799          161 DELVKKLKANNKNVYLISGGFRHMINILN-ILKWDV  195 (203)
Q Consensus       161 ~elL~~Lk~~G~~vaIVTn~~~~~i~~ll-~lGL~~  195 (203)
                      .+.|+.|+++|++++++|+.+...+..++ .+|+..
T Consensus       439 ~eAL~~L~ekGI~~VIATGRs~~~i~~l~~~Lgl~~  474 (694)
T PRK14502        439 LDALRLLKDKELPLVFCSAKTMGEQDLYRNELGIKD  474 (694)
T ss_pred             HHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCCCC
Confidence            34566778889999999999988888888 888754

>PF05152 DUF705: Protein of unknown function (DUF705); InterPro: IPR007827 This family contains uncharacterised baculoviral proteins

Probab=96.62  E-value=0.011  Score=51.59  Aligned_cols=47  Identities=23%  Similarity=0.168  Sum_probs=42.1

Q ss_pred             CCCcHHHHHHHHHHCCCeEEEEcCCCHHHHHHHH-HcCCCccceEEec
Q 028799          156 LSPGIDELVKKLKANNKNVYLISGGFRHMINILN-ILKWDVLKVIQIT  202 (203)
Q Consensus       156 l~PG~~elL~~Lk~~G~~vaIVTn~~~~~i~~ll-~lGL~~~~~i~it  202 (203)
                      ..|.+.+-|..||+.|.-+++=|.|.++-+..-+ .++|..+|.++|+
T Consensus       143 r~~~v~~sL~~Lk~~g~vLvLWSyG~~eHV~~sl~~~~L~~~Fd~ii~  190 (297)
T PF05152_consen  143 RDPAVYDSLRELKEQGCVLVLWSYGNREHVRHSLKELKLEGYFDIIIC  190 (297)
T ss_pred             CChHHHHHHHHHHHcCCEEEEecCCCHHHHHHHHHHhCCccccEEEEe
Confidence            3566778888999999999999999999999988 9999999999886

>TIGR02250 FCP1_euk FCP1-like phosphatase, phosphatase domain

Probab=96.59  E-value=0.0035  Score=49.98  Aligned_cols=47  Identities=17%  Similarity=0.161  Sum_probs=40.3

Q ss_pred             CCCCCcHHHHHHHHHHCCCeEEEEcCCCHHHHHHHH-HcCCCc-cc-eEEe
Q 028799          154 PRLSPGIDELVKKLKANNKNVYLISGGFRHMINILN-ILKWDV-LK-VIQI  201 (203)
Q Consensus       154 ~~l~PG~~elL~~Lk~~G~~vaIVTn~~~~~i~~ll-~lGL~~-~~-~i~i  201 (203)
                      +.++||+.++|+.|++. ++++|+|++.+..++.++ .++... ++ ..++
T Consensus        57 v~~rPgv~efL~~l~~~-yel~I~T~~~~~yA~~vl~~ldp~~~~F~~ri~  106 (156)
T TIGR02250        57 TKLRPFLHEFLKEASKL-YEMHVYTMGTRAYAQAIAKLIDPDGKYFGDRII  106 (156)
T ss_pred             EEECCCHHHHHHHHHhh-cEEEEEeCCcHHHHHHHHHHhCcCCCeeccEEE
Confidence            67899999999999954 999999999999999999 999874 55 3433

This domain is related to domains found in the human NLI interacting factor-like phosphatases, and together both are detected by the Pfam model pfam03031.

>TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668

Probab=96.57  E-value=0.0042  Score=49.80  Aligned_cols=41  Identities=17%  Similarity=0.341  Sum_probs=35.8

Q ss_pred             CCCCcHHHHHHHHHHCCCeEEEEcCCC-HHHHHHHH-HcCCCc
Q 028799          155 RLSPGIDELVKKLKANNKNVYLISGGF-RHMINILN-ILKWDV  195 (203)
Q Consensus       155 ~l~PG~~elL~~Lk~~G~~vaIVTn~~-~~~i~~ll-~lGL~~  195 (203)
                      .++||+.++|+.|+++|++++|+||+. ...+..++ .+|+..
T Consensus        43 ~~~pgv~e~L~~Lk~~g~~l~I~Sn~~~~~~~~~~~~~~gl~~   85 (170)
T TIGR01668        43 EAYPALRDWIEELKAAGRKLLIVSNNAGEQRAKAVEKALGIPV   85 (170)
T ss_pred             CcChhHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHHcCCEE
Confidence            568999999999999999999999999 67777777 888753

This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family.

>PRK10187 trehalose-6-phosphate phosphatase; Provisional

Probab=96.47  E-value=0.0065  Score=52.29  Aligned_cols=37  Identities=22%  Similarity=0.219  Sum_probs=26.8

Q ss_pred             CCCcHHHHHHHHHH-CCCeEEEEcCCCHHHHHHHH-HcC
Q 028799          156 LSPGIDELVKKLKA-NNKNVYLISGGFRHMINILN-ILK  192 (203)
Q Consensus       156 l~PG~~elL~~Lk~-~G~~vaIVTn~~~~~i~~ll-~lG  192 (203)
                      +.|...+.|+.|++ .|++++|+|+.+...+..++ .++
T Consensus        37 i~~~~~~~L~~L~~~~g~~v~i~SGR~~~~~~~~~~~~~   75 (266)
T PRK10187         37 VPDNILQGLQLLATANDGALALISGRSMVELDALAKPYR   75 (266)
T ss_pred             CCHHHHHHHHHHHhCCCCcEEEEeCCCHHHHHHhcCccc
Confidence            44666777777776 68888888888888777766 554

>TIGR01686 FkbH FkbH-like domain

Probab=96.44  E-value=0.0044  Score=54.62  Aligned_cols=47  Identities=15%  Similarity=-0.063  Sum_probs=41.1

Q ss_pred             CCCCcHHHHHHHHHHCCCeEEEEcCCCHHHHHHHH-H----cCCCccceEEe
Q 028799          155 RLSPGIDELVKKLKANNKNVYLISGGFRHMINILN-I----LKWDVLKVIQI  201 (203)
Q Consensus       155 ~l~PG~~elL~~Lk~~G~~vaIVTn~~~~~i~~ll-~----lGL~~~~~i~i  201 (203)
                      .++||+.++|+.|+++|++++|+|++....+..++ +    +++..++...+
T Consensus        31 ~~~~~~~e~L~~L~~~Gi~lai~S~n~~~~a~~~l~~~~~~~~~~~~f~~~~   82 (320)
T TIGR01686        31 PLHKTLQEKIKTLKKQGFLLALASKNDEDDAKKVFERRKDFILQAEDFDARS   82 (320)
T ss_pred             ccHHHHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHhCccccCcHHHeeEEE
Confidence            35899999999999999999999999999999998 8    88876665543

The C-terminal portion of this domain is unique to this family (by BLAST).

>PLN02499 glycerol-3-phosphate acyltransferase

Probab=96.37  E-value=0.032  Score=52.26  Aligned_cols=34  Identities=15%  Similarity=0.103  Sum_probs=29.0

Q ss_pred             HHHHHHHCCCeEEEEcCCCHHHHHHHH-H-cCCCccc
Q 028799          163 LVKKLKANNKNVYLISGGFRHMINILN-I-LKWDVLK  197 (203)
Q Consensus       163 lL~~Lk~~G~~vaIVTn~~~~~i~~ll-~-lGL~~~~  197 (203)
                      .++..++.| +++|+|.+++-++++++ . +|.+...
T Consensus       101 ~~~~~~~~g-~~vVVTAsPrvmVEpFake~LG~D~Vv  136 (498)
T PLN02499        101 AWKVFSSCD-KRVVVTRMPRVMVERFAKEHLRADEVI  136 (498)
T ss_pred             HHHHHHcCC-eEEEEeCCHHHHHHHHHHHhcCCceEE
Confidence            566777788 99999999999999999 4 9988753

>TIGR01525 ATPase-IB_hvy heavy metal translocating P-type ATPase

Probab=96.12  E-value=0.0082  Score=56.80  Aligned_cols=46  Identities=20%  Similarity=0.291  Sum_probs=42.3

Q ss_pred             CCCCCCcHHHHHHHHHHCC-CeEEEEcCCCHHHHHHHH-HcCCCccce
Q 028799          153 PPRLSPGIDELVKKLKANN-KNVYLISGGFRHMINILN-ILKWDVLKV  198 (203)
Q Consensus       153 ~~~l~PG~~elL~~Lk~~G-~~vaIVTn~~~~~i~~ll-~lGL~~~~~  198 (203)
                      ..+++||+.+++++|+++| ++++|+||.+...++.++ ++|++.++.
T Consensus       382 ~d~~~~g~~e~l~~L~~~g~i~v~ivTgd~~~~a~~i~~~lgi~~~f~  429 (556)
T TIGR01525       382 RDQLRPEAKEAIAALKRAGGIKLVMLTGDNRSAAEAVAAELGIDEVHA  429 (556)
T ss_pred             cccchHhHHHHHHHHHHcCCCeEEEEeCCCHHHHHHHHHHhCCCeeec
Confidence            3579999999999999999 999999999999999999 999987654

This alignment encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512.

>TIGR02251 HIF-SF_euk Dullard-like phosphatase domain

Probab=95.89  E-value=0.016  Score=46.18  Aligned_cols=45  Identities=11%  Similarity=0.163  Sum_probs=39.5

Q ss_pred             CCCCCcHHHHHHHHHHCCCeEEEEcCCCHHHHHHHH-HcCCCc-cceE
Q 028799          154 PRLSPGIDELVKKLKANNKNVYLISGGFRHMINILN-ILKWDV-LKVI  199 (203)
Q Consensus       154 ~~l~PG~~elL~~Lk~~G~~vaIVTn~~~~~i~~ll-~lGL~~-~~~i  199 (203)
                      +...||+.++|+.|.+. +.++|.|++.+..++.++ .++... ++.-
T Consensus        41 v~~RPgl~eFL~~l~~~-yei~I~Ts~~~~yA~~il~~ldp~~~~f~~   87 (162)
T TIGR02251        41 VFKRPHVDEFLERVSKW-YELVIFTASLEEYADPVLDILDRGGKVISR   87 (162)
T ss_pred             EEECCCHHHHHHHHHhc-CEEEEEcCCcHHHHHHHHHHHCcCCCEEeE
Confidence            56899999999999987 999999999999999999 998765 4433

This domain is related to domains found in FCP1-like phosphatases (TIGR02250), and together both are detected by the Pfam model pfam03031.

>TIGR01512 ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase

Probab=95.85  E-value=0.012  Score=55.65  Aligned_cols=45  Identities=22%  Similarity=0.276  Sum_probs=41.7

Q ss_pred             CCCCCcHHHHHHHHHHCCC-eEEEEcCCCHHHHHHHH-HcCCCccce
Q 028799          154 PRLSPGIDELVKKLKANNK-NVYLISGGFRHMINILN-ILKWDVLKV  198 (203)
Q Consensus       154 ~~l~PG~~elL~~Lk~~G~-~vaIVTn~~~~~i~~ll-~lGL~~~~~  198 (203)
                      .+++||+.+++++|+++|+ +++++||.+...++.++ ++|++.++.
T Consensus       361 d~l~~~~~e~i~~L~~~Gi~~v~vvTgd~~~~a~~i~~~lgi~~~f~  407 (536)
T TIGR01512       361 DEPRPDAAEAIAELKALGIEKVVMLTGDRRAVAERVARELGIDEVHA  407 (536)
T ss_pred             ccchHHHHHHHHHHHHcCCCcEEEEcCCCHHHHHHHHHHcCChhhhh
Confidence            5799999999999999999 99999999999999999 999987653

.

>TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family

Probab=95.75  E-value=0.016  Score=45.67  Aligned_cols=36  Identities=14%  Similarity=0.046  Sum_probs=32.8

Q ss_pred             HHHHHHHCCCeEEEEcCCCHHHHHHHH-HcCCCccce
Q 028799          163 LVKKLKANNKNVYLISGGFRHMINILN-ILKWDVLKV  198 (203)
Q Consensus       163 lL~~Lk~~G~~vaIVTn~~~~~i~~ll-~lGL~~~~~  198 (203)
                      .+++|+++|++++|+||++...++.++ ++|++.++.
T Consensus        36 ~i~~Lk~~G~~i~IvTn~~~~~~~~~l~~~gi~~~~~   72 (154)
T TIGR01670        36 GIRCALKSGIEVAIITGRKAKLVEDRCKTLGITHLYQ   72 (154)
T ss_pred             HHHHHHHCCCEEEEEECCCCHHHHHHHHHcCCCEEEe
Confidence            799999999999999999999999999 999987653

The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved.

>COG2503 Predicted secreted acid phosphatase [General function prediction only]

Probab=95.71  E-value=0.043  Score=47.10  Aligned_cols=85  Identities=15%  Similarity=0.173  Sum_probs=55.4

Q ss_pred             CCcEEEEECCCcccccchHHHHHHHcCCCccHHHHHHHHhCCCCCHHHHHHHHHhccCCCHHHHHHHHHhCCCCCCCcHH
Q 028799           82 TADAVCFDVDSTVCVDEGIDELAEFCGAGKAVAEWTARAMGGSVPFEEALAARLSLFKPSLSQVQDFLEKRPPRLSPGID  161 (203)
Q Consensus        82 ~~kaVIFD~DGTLiDse~~~~la~~~G~~~~~~~~~~~~~gG~~~~~e~l~~~~~~~~~~~e~l~~~~~~~~~~l~PG~~  161 (203)
                      +.++|+.|+|-|++|..+.+-..-.-+.+.                             +++....+.......+.||+.
T Consensus        78 K~~aVvlDlDETvLdNs~Yqgy~v~nnk~f-----------------------------~pe~Wd~wV~a~~sk~vpGA~  128 (274)
T COG2503          78 KKKAVVLDLDETVLDNSAYQGYQVLNNKGF-----------------------------TPETWDKWVQAKKSKAVPGAV  128 (274)
T ss_pred             CCceEEEecchHhhcCccccchhhhcCCCC-----------------------------CccchHHHHhhcccccCccHH
Confidence            445999999999999654322111111110                             122223333333468999999


Q ss_pred             HHHHHHHHCCCeEEEEcCCCHHH-H---HHHH-HcCCCc
Q 028799          162 ELVKKLKANNKNVYLISGGFRHM-I---NILN-ILKWDV  195 (203)
Q Consensus       162 elL~~Lk~~G~~vaIVTn~~~~~-i---~~ll-~lGL~~  195 (203)
                      |++++..++|-.+.-+||...+. .   ..-+ +.||+.
T Consensus       129 eFl~Yvn~~Gg~ifyiSNR~~~~~~~~T~~nLk~~g~~~  167 (274)
T COG2503         129 EFLNYVNSNGGKIFYISNRDQENEKDGTIENLKSEGLPQ  167 (274)
T ss_pred             HHHHHHHhcCcEEEEEeccchhcccchhHHHHHHcCccc
Confidence            99999999999999999998776 2   2234 777754

>PF08235 LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 This domain is found in Saccharomyces cerevisiae (Baker's yeast) protein SMP2, proteins with an N-terminal lipin domain (IPR007651 from INTERPRO) and phosphatidylinositol transfer proteins []

Probab=95.36  E-value=0.046  Score=43.88  Aligned_cols=30  Identities=20%  Similarity=0.296  Sum_probs=24.5

Q ss_pred             CCCcHHHHHHHHHHCCCeEEEEcCCCHHHH
Q 028799          156 LSPGIDELVKKLKANNKNVYLISGGFRHMI  185 (203)
Q Consensus       156 l~PG~~elL~~Lk~~G~~vaIVTn~~~~~i  185 (203)
                      ..||+.+++..++++||++.-+|+.+...+
T Consensus        28 ~h~g~~~l~~~i~~~GY~ilYlTaRp~~qa   57 (157)
T PF08235_consen   28 THPGAAELYRKIADNGYKILYLTARPIGQA   57 (157)
T ss_pred             hhhcHHHHHHHHHHCCeEEEEECcCcHHHH
Confidence            468888899999999999999998886544

SMP2 is involved in plasmid maintenance and respiration []. Lipin proteins are involved in adipose tissue development and insulin resistance [].

>TIGR01457 HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydrolase, TIGR01457

Probab=95.28  E-value=0.035  Score=47.14  Aligned_cols=48  Identities=8%  Similarity=0.099  Sum_probs=37.1

Q ss_pred             CCCcHHHHHHHHHHCCCeEEEEcCC---CHHHHHHHH-HcCCCccceEEecC
Q 028799          156 LSPGIDELVKKLKANNKNVYLISGG---FRHMINILN-ILKWDVLKVIQITS  203 (203)
Q Consensus       156 l~PG~~elL~~Lk~~G~~vaIVTn~---~~~~i~~ll-~lGL~~~~~i~it~  203 (203)
                      ++||+.+.|+.|+++|++++++||+   +...+...+ .+|++....-+|||
T Consensus        18 ~i~~a~~~l~~l~~~g~~~~~~Tnn~~r~~~~~~~~l~~~g~~~~~~~iit~   69 (249)
T TIGR01457        18 RIPEAETFVHELQKRDIPYLFVTNNSTRTPESVAEMLASFDIPATLETVFTA   69 (249)
T ss_pred             eCcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCCChhhEeeH
Confidence            4678999999999999999999983   355566667 89987655555554

This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in this model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those.

>PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional

Probab=95.23  E-value=0.054  Score=52.97  Aligned_cols=39  Identities=26%  Similarity=0.314  Sum_probs=31.0

Q ss_pred             CCCCcHHHHHHHHHHC-CCeEEEEcCCCHHHHHHHH-HcCC
Q 028799          155 RLSPGIDELVKKLKAN-NKNVYLISGGFRHMINILN-ILKW  193 (203)
Q Consensus       155 ~l~PG~~elL~~Lk~~-G~~vaIVTn~~~~~i~~ll-~lGL  193 (203)
                      .+.+.+.+.|+.|.+. |..++|+|+.....++.++ .+++
T Consensus       514 ~~~~~~~~~L~~L~~d~g~~V~ivSGR~~~~l~~~~~~~~l  554 (726)
T PRK14501        514 VPDKELRDLLRRLAADPNTDVAIISGRDRDTLERWFGDLPI  554 (726)
T ss_pred             CCCHHHHHHHHHHHcCCCCeEEEEeCCCHHHHHHHhCCCCe
Confidence            3557778888888884 9999999999988888877 5543

>COG4229 Predicted enolase-phosphatase [Energy production and conversion]

Probab=95.13  E-value=0.13  Score=42.53  Aligned_cols=36  Identities=25%  Similarity=0.357  Sum_probs=31.2

Q ss_pred             CCCCCCcHHHHHHHHHHCCCeEEEEcCCCHHHHHHH
Q 028799          153 PPRLSPGIDELVKKLKANNKNVYLISGGFRHMINIL  188 (203)
Q Consensus       153 ~~~l~PG~~elL~~Lk~~G~~vaIVTn~~~~~i~~l  188 (203)
                      ..++||++.+.|+.-++.|++++|-|+|+-...+-+
T Consensus       101 kahlypDav~~ik~wk~~g~~vyiYSSGSV~AQkL~  136 (229)
T COG4229         101 KAHLYPDAVQAIKRWKALGMRVYIYSSGSVKAQKLF  136 (229)
T ss_pred             ccccCHhHHHHHHHHHHcCCcEEEEcCCCchhHHHh
Confidence            468999999999999999999999999987754433

>TIGR01511 ATPase-IB1_Cu copper-(or silver)-translocating P-type ATPase

Probab=95.12  E-value=0.031  Score=53.09  Aligned_cols=41  Identities=20%  Similarity=0.332  Sum_probs=39.0

Q ss_pred             CCCCCcHHHHHHHHHHCCCeEEEEcCCCHHHHHHHH-HcCCC
Q 028799          154 PRLSPGIDELVKKLKANNKNVYLISGGFRHMINILN-ILKWD  194 (203)
Q Consensus       154 ~~l~PG~~elL~~Lk~~G~~vaIVTn~~~~~i~~ll-~lGL~  194 (203)
                      .+++||+.+++++|+++|++++++||.+...++.++ ++|++
T Consensus       404 d~l~~~a~e~i~~Lk~~Gi~v~ilSgd~~~~a~~ia~~lgi~  445 (562)
T TIGR01511       404 DQLRPEAKEVIQALKRRGIEPVMLTGDNRKTAKAVAKELGIN  445 (562)
T ss_pred             ccccHHHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHcCCc
Confidence            578999999999999999999999999999999999 99996

One member from Halobacterium is annotated as "molybdenum-binding protein" although no evidence can be found for this classification.

>TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458

Probab=95.12  E-value=0.023  Score=48.56  Aligned_cols=47  Identities=21%  Similarity=0.257  Sum_probs=35.8

Q ss_pred             CCCcHHHHHHHHHHCCCeEEEEcCCCHHH---HHHHH-HcCCCccceEEec
Q 028799          156 LSPGIDELVKKLKANNKNVYLISGGFRHM---INILN-ILKWDVLKVIQIT  202 (203)
Q Consensus       156 l~PG~~elL~~Lk~~G~~vaIVTn~~~~~---i~~ll-~lGL~~~~~i~it  202 (203)
                      +.||+.+.|+.|+++|++++++||.+...   +...+ .+|++.-..-++|
T Consensus        22 ~~~~a~~al~~l~~~G~~~~~~Tn~~~~~~~~~~~~l~~~g~~~~~~~i~t   72 (257)
T TIGR01458        22 AVPGSQEAVKRLRGASVKVRFVTNTTKESKQDLLERLQRLGFDISEDEVFT   72 (257)
T ss_pred             cCCCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHHcCCCCCHHHeEc
Confidence            68999999999999999999999976553   44555 8888643333444

This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published.

>TIGR02245 HAD_IIID1 HAD-superfamily subfamily IIID hydrolase, TIGR02245

Probab=95.02  E-value=0.053  Score=44.96  Aligned_cols=38  Identities=16%  Similarity=0.140  Sum_probs=34.6

Q ss_pred             CCCCcHHHHHHHHHHCCCeEEEEcCCCHHHHHHHH-HcCC
Q 028799          155 RLSPGIDELVKKLKANNKNVYLISGGFRHMINILN-ILKW  193 (203)
Q Consensus       155 ~l~PG~~elL~~Lk~~G~~vaIVTn~~~~~i~~ll-~lGL  193 (203)
                      ...|++.++|+.+.+ .+.++|-|++...+++.++ .+|+
T Consensus        45 ~kRP~l~eFL~~~~~-~feIvVwTAa~~~ya~~~l~~l~~   83 (195)
T TIGR02245        45 LMRPYLHEFLTSAYE-DYDIVIWSATSMKWIEIKMTELGV   83 (195)
T ss_pred             EeCCCHHHHHHHHHh-CCEEEEEecCCHHHHHHHHHHhcc
Confidence            468999999999987 7999999999999999999 8876

This family of sequences appears to belong to the Haloacid Dehalogenase (HAD) superfamily of enzymes by virtue of the presence of three catalytic domains, in this case: LLVLD(ILV)D(YH)T, I(VMG)IWS, and (DN)(VC)K(PA)Lx{15-17}T(IL)(MH)(FV)DD(IL)(GRS)(RK)N. Since this family has no large "cap" domain between motifs 1 and 2 or between 2 and 3, it is formally a "class III" HAD.

>PLN02423 phosphomannomutase

Probab=94.27  E-value=0.026  Score=47.89  Aligned_cols=19  Identities=32%  Similarity=0.555  Sum_probs=15.2

Q ss_pred             cCCcEEE-EECCCcccccch
Q 028799           81 RTADAVC-FDVDSTVCVDEG   99 (203)
Q Consensus        81 ~~~kaVI-FD~DGTLiDse~   99 (203)
                      +++++++ |||||||++++.
T Consensus         4 ~~~~~i~~~D~DGTLl~~~~   23 (245)
T PLN02423          4 RKPGVIALFDVDGTLTAPRK   23 (245)
T ss_pred             CccceEEEEeccCCCcCCCC
Confidence            5677666 999999999753

>PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming]

Probab=94.18  E-value=0.15  Score=50.93  Aligned_cols=34  Identities=18%  Similarity=0.240  Sum_probs=28.6

Q ss_pred             CCCcHHHHHHHH-HHCCCeEEEEcCCCHHHHHHHH
Q 028799          156 LSPGIDELVKKL-KANNKNVYLISGGFRHMINILN  189 (203)
Q Consensus       156 l~PG~~elL~~L-k~~G~~vaIVTn~~~~~i~~ll  189 (203)
                      +.|++.++|+.| ++.|..++|+|+.....++.++
T Consensus       617 p~~~~~~~L~~L~~d~g~~VaIvSGR~~~~L~~~f  651 (854)
T PLN02205        617 PSSKSIDILNTLCRDKNNMVFIVSARSRKTLADWF  651 (854)
T ss_pred             CCHHHHHHHHHHHhcCCCEEEEEeCCCHHHHHHHh
Confidence            456778888887 6779999999999999988877

>TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit

Probab=94.17  E-value=0.076  Score=42.88  Aligned_cols=35  Identities=17%  Similarity=0.063  Sum_probs=30.3

Q ss_pred             HHHHHHCCCeEEEEcCCCHHHHHHHH-HcCCCccce
Q 028799          164 VKKLKANNKNVYLISGGFRHMINILN-ILKWDVLKV  198 (203)
Q Consensus       164 L~~Lk~~G~~vaIVTn~~~~~i~~ll-~lGL~~~~~  198 (203)
                      +..|+++|++++|+||+....++..+ ++|+..++.
T Consensus        43 ~~~L~~~Gi~laIiT~k~~~~~~~~l~~lgi~~~f~   78 (169)
T TIGR02726        43 VIVLQLCGIDVAIITSKKSGAVRHRAEELKIKRFHE   78 (169)
T ss_pred             HHHHHHCCCEEEEEECCCcHHHHHHHHHCCCcEEEe
Confidence            44667889999999999999999999 999987654

Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases.

>TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit

Probab=94.11  E-value=0.026  Score=45.56  Aligned_cols=18  Identities=22%  Similarity=0.259  Sum_probs=16.7

Q ss_pred             ccCCcEEEEECCCccccc
Q 028799           80 WRTADAVCFDVDSTVCVD   97 (203)
Q Consensus        80 ~~~~kaVIFD~DGTLiDs   97 (203)
                      |+.+++++||+||||+|.
T Consensus         4 ~~~i~~~v~d~dGv~tdg   21 (169)
T TIGR02726         4 AKNIKLVILDVDGVMTDG   21 (169)
T ss_pred             cccCeEEEEeCceeeECC
Confidence            677999999999999997

Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases.

>PF05761 5_nucleotid: 5' nucleotidase family; InterPro: IPR008380 This family includes a 5'-nucleotidase, 3

Probab=93.85  E-value=0.09  Score=48.85  Aligned_cols=50  Identities=20%  Similarity=0.375  Sum_probs=38.1

Q ss_pred             CCCCCcHHHHHHHHHHCCCeEEEEcCCCHHHHHHHH--Hc--------CCCccceEEecC
Q 028799          154 PRLSPGIDELVKKLKANNKNVYLISGGFRHMINILN--IL--------KWDVLKVIQITS  203 (203)
Q Consensus       154 ~~l~PG~~elL~~Lk~~G~~vaIVTn~~~~~i~~ll--~l--------GL~~~~~i~it~  203 (203)
                      +..-|.+..+|+.||+.|.++.|+||++..+++.++  .+        +|..+|+++||.
T Consensus       182 i~k~~~l~~~L~~lr~~GKklFLiTNS~~~yt~~~M~yl~g~~~~~~~dW~dlFDvVIv~  241 (448)
T PF05761_consen  182 IHKDPKLPPWLERLRSAGKKLFLITNSPFDYTNAVMSYLLGPFLGEDPDWRDLFDVVIVD  241 (448)
T ss_dssp             EE--CHHHHHHHHHHCCT-EEEEE-SS-HHHHHHHHHHHCGCCSSTTT-GGGCECEEEES
T ss_pred             ccCCchHHHHHHHHHhcCceEEEecCCCCchhhhhhhhccCCCCCCCCChhhheeEEEEc
Confidence            345789999999999999999999999999998877  44        567899999874

1.3.5 from EC, specific for purines (IMP and GMP) []. These enzymes are members of the Haloacid Dehalogenase (HAD) superfamily. HAD members are recognised by three short motifs {hhhhDxDx(T/V)}, {hhhh(T/S)}, and either {hhhh(D/E)(D/E)x(3-4)(G/N)} or {hhhh(G/N)(D/E)x(3-4)(D/E)} (where "h" stands for a hydrophobic residue). Crystal structures of many HAD enzymes has verified PSI-PRED predictions of secondary structural elements which show each of the "hhhh" sequences of the motifs as part of beta sheets. This subfamily of enzymes is part of "Subfamily I" of the HAD superfamily by virtue of a "cap" domain in between motifs 1 and 2. This subfamily's cap domain has a different predicted secondary structure than all other known HAD enzymes and thus has been designated "subfamily IG", the domain appears to consist of a mixed alpha/beta fold.; PDB: 2BDE_A 2XCW_A 2XCX_A 2XCV_A 2XJB_A 2JCM_A 2XJE_A 2J2C_A 2XJF_A 2XJD_A ....

>TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein

Probab=93.59  E-value=0.18  Score=41.31  Aligned_cols=35  Identities=14%  Similarity=0.146  Sum_probs=31.8

Q ss_pred             HHHHHHHHHHCCCeEEEEcCCCHHHHHHHH-HcCCC
Q 028799          160 IDELVKKLKANNKNVYLISGGFRHMINILN-ILKWD  194 (203)
Q Consensus       160 ~~elL~~Lk~~G~~vaIVTn~~~~~i~~ll-~lGL~  194 (203)
                      ..+.|+.|+++|++++++||.+...+..++ .+|++
T Consensus        21 ~~~~l~~l~~~gi~~~i~TgR~~~~~~~~~~~l~~~   56 (221)
T TIGR02463        21 AAPWLTRLQEAGIPVILCTSKTAAEVEYLQKALGLT   56 (221)
T ss_pred             HHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCC
Confidence            467888889999999999999999999999 99986

This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate.

>TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family

Probab=93.51  E-value=0.035  Score=43.74  Aligned_cols=15  Identities=20%  Similarity=0.271  Sum_probs=13.4

Q ss_pred             CcEEEEECCCccccc
Q 028799           83 ADAVCFDVDSTVCVD   97 (203)
Q Consensus        83 ~kaVIFD~DGTLiDs   97 (203)
                      +++|+||+||||++.
T Consensus         1 ~~~~~~D~Dgtl~~~   15 (154)
T TIGR01670         1 IRLLILDVDGVLTDG   15 (154)
T ss_pred             CeEEEEeCceeEEcC
Confidence            578999999999994

The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved.

>PF05822 UMPH-1: Pyrimidine 5'-nucleotidase (UMPH-1); InterPro: IPR006434 This family is a small group of metazoan sequences with sequences from Arabidopsis thaliana (Mouse-ear cress) and rice

Probab=93.22  E-value=0.15  Score=43.85  Aligned_cols=55  Identities=18%  Similarity=0.276  Sum_probs=40.7

Q ss_pred             CHHHHHHHHHhCCCCCCCcHHHHHHHHHHCCCeEEEEcCCCHHHHHHHH-HcCCCc
Q 028799          141 SLSQVQDFLEKRPPRLSPGIDELVKKLKANNKNVYLISGGFRHMINILN-ILKWDV  195 (203)
Q Consensus       141 ~~e~l~~~~~~~~~~l~PG~~elL~~Lk~~G~~vaIVTn~~~~~i~~ll-~lGL~~  195 (203)
                      +.+++.+..++..+.+.+|+.++++.|+++++|+.|.|+|....++.++ +.|.-.
T Consensus        76 ~k~~i~~~V~~s~i~LRdg~~~~f~~L~~~~IP~lIFSAGlgdvI~~vL~q~~~~~  131 (246)
T PF05822_consen   76 TKSEIEEAVKESDIMLRDGVEEFFDKLEEHNIPLLIFSAGLGDVIEEVLRQAGVFH  131 (246)
T ss_dssp             BGGGHHHHHHCS---B-BTHHHHHHHHHCTT--EEEEEEEEHHHHHHHHHHTT--B
T ss_pred             CHHHHHHHHHhcchhhhcCHHHHHHHHHhcCCCEEEEeCCcHHHHHHHHHHcCCCC
Confidence            3456667777666899999999999999999999999999999999999 776543

The sequences represent pyrimidine 5-nucleotidases, apparently in reference to HSPC233, the Homo sapiens (Human) homologue []. The structure of mouse sequence has been reported []. This group of sequences was originally found during searches for members of the haloacid dehalogenase (HAD) superfamily (IPR005834 from INTERPRO). All of the conserved catalytic motifs [] are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches of that subfamily (IA-ID) as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.; GO: 0000287 magnesium ion binding, 0008253 5'-nucleotidase activity, 0005737 cytoplasm; PDB: 2BDU_B 2G07_A 2G06_A 2G0A_A 2Q4T_A 2G09_A 2G08_A 2VKQ_A 2CN1_A 2JGA_A.

>TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase

Probab=93.08  E-value=0.25  Score=41.34  Aligned_cols=40  Identities=15%  Similarity=0.052  Sum_probs=34.3

Q ss_pred             CCcHHHHHHHHHHCCCeEEEEcCCCHHHHHHHH-HcCCCcc
Q 028799          157 SPGIDELVKKLKANNKNVYLISGGFRHMINILN-ILKWDVL  196 (203)
Q Consensus       157 ~PG~~elL~~Lk~~G~~vaIVTn~~~~~i~~ll-~lGL~~~  196 (203)
                      .|+..+.|+.|+++|++++++|+.+...+..++ .+|+...
T Consensus        17 ~~~~~~ai~~l~~~G~~~vi~TgR~~~~~~~~~~~lg~~~~   57 (225)
T TIGR02461        17 PGPAREALEELKDLGFPIVFVSSKTRAEQEYYREELGVEPP   57 (225)
T ss_pred             chHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCCCc
Confidence            345688889999999999999999999888888 9998653

Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles.

>PRK10671 copA copper exporting ATPase; Provisional

Probab=92.83  E-value=0.18  Score=50.11  Aligned_cols=44  Identities=11%  Similarity=0.118  Sum_probs=40.5

Q ss_pred             CCCCCcHHHHHHHHHHCCCeEEEEcCCCHHHHHHHH-HcCCCccc
Q 028799          154 PRLSPGIDELVKKLKANNKNVYLISGGFRHMINILN-ILKWDVLK  197 (203)
Q Consensus       154 ~~l~PG~~elL~~Lk~~G~~vaIVTn~~~~~i~~ll-~lGL~~~~  197 (203)
                      -+++||+.+.++.|+++|++++++|+.....++.++ .+|++.++
T Consensus       649 d~~r~~a~~~i~~L~~~gi~v~~~Tgd~~~~a~~ia~~lgi~~~~  693 (834)
T PRK10671        649 DPLRSDSVAALQRLHKAGYRLVMLTGDNPTTANAIAKEAGIDEVI  693 (834)
T ss_pred             CcchhhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCCEEE
Confidence            478999999999999999999999999999999999 99997644

>COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only]

Probab=92.75  E-value=0.052  Score=43.70  Aligned_cols=22  Identities=14%  Similarity=0.216  Sum_probs=18.7

Q ss_pred             HhhccCCcEEEEECCCcccccc
Q 028799           77 LQLWRTADAVCFDVDSTVCVDE   98 (203)
Q Consensus        77 ~~~~~~~kaVIFD~DGTLiDse   98 (203)
                      .+...+++.+|||+||||+|..
T Consensus         2 ~~ra~~IkLli~DVDGvLTDG~   23 (170)
T COG1778           2 IARAKNIKLLILDVDGVLTDGK   23 (170)
T ss_pred             hhhhhhceEEEEeccceeecCe
Confidence            3456789999999999999974

>TIGR01522 ATPase-IIA2_Ca golgi membrane calcium-translocating P-type ATPase

Probab=92.63  E-value=0.2  Score=50.26  Aligned_cols=42  Identities=19%  Similarity=0.252  Sum_probs=39.5

Q ss_pred             CCCCcHHHHHHHHHHCCCeEEEEcCCCHHHHHHHH-HcCCCcc
Q 028799          155 RLSPGIDELVKKLKANNKNVYLISGGFRHMINILN-ILKWDVL  196 (203)
Q Consensus       155 ~l~PG~~elL~~Lk~~G~~vaIVTn~~~~~i~~ll-~lGL~~~  196 (203)
                      +++||+.+.++.|++.|+++.++||.....+..+. .+|+...
T Consensus       528 p~r~~~~~~i~~l~~~Gi~v~miTGD~~~tA~~ia~~~Gi~~~  570 (884)
T TIGR01522       528 PPRPGVKEAVTTLITGGVRIIMITGDSQETAVSIARRLGMPSK  570 (884)
T ss_pred             cchhHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCC
Confidence            78999999999999999999999999999999999 9999653

The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116.

>TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily

Probab=92.35  E-value=0.33  Score=40.81  Aligned_cols=39  Identities=26%  Similarity=0.296  Sum_probs=33.2

Q ss_pred             CCcHHHHHHHHHHCCCeEEEEcCCCHHHHHHHH-HcCCCc
Q 028799          157 SPGIDELVKKLKANNKNVYLISGGFRHMINILN-ILKWDV  195 (203)
Q Consensus       157 ~PG~~elL~~Lk~~G~~vaIVTn~~~~~i~~ll-~lGL~~  195 (203)
                      .|...+.|+.|+++|++++++||.+...+..++ .++++.
T Consensus        18 ~~~~~~~i~~l~~~G~~~~iaTGR~~~~~~~~~~~~~~~~   57 (256)
T TIGR00099        18 SPSTKEALAKLREKGIKVVLATGRPYKEVKNILKELGLDT   57 (256)
T ss_pred             CHHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCCC
Confidence            345577888899999999999999999988888 888874

The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences.

>TIGR01497 kdpB K+-transporting ATPase, B subunit

Probab=92.33  E-value=0.21  Score=48.79  Aligned_cols=43  Identities=19%  Similarity=0.179  Sum_probs=40.3

Q ss_pred             CCCCcHHHHHHHHHHCCCeEEEEcCCCHHHHHHHH-HcCCCccc
Q 028799          155 RLSPGIDELVKKLKANNKNVYLISGGFRHMINILN-ILKWDVLK  197 (203)
Q Consensus       155 ~l~PG~~elL~~Lk~~G~~vaIVTn~~~~~i~~ll-~lGL~~~~  197 (203)
                      ++.||+.+.++.|++.|+++.++|+.....+..+. .+|+++++
T Consensus       446 ~~Rp~a~eaI~~l~~~Gi~v~miTGD~~~ta~~iA~~lGI~~v~  489 (675)
T TIGR01497       446 IVKGGIKERFAQLRKMGIKTIMITGDNRLTAAAIAAEAGVDDFI  489 (675)
T ss_pred             cchhHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCEEE
Confidence            78999999999999999999999999999999999 99997643

One sequence is apparently mis-annotated in the primary literature, but properly annotated by TIGR.

>TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily

Probab=92.08  E-value=0.38  Score=39.27  Aligned_cols=39  Identities=15%  Similarity=0.141  Sum_probs=31.6

Q ss_pred             CcHHHHHHHHHHCCCeEEEEcCCCHHHHHHHH-HcCCCcc
Q 028799          158 PGIDELVKKLKANNKNVYLISGGFRHMINILN-ILKWDVL  196 (203)
Q Consensus       158 PG~~elL~~Lk~~G~~vaIVTn~~~~~i~~ll-~lGL~~~  196 (203)
                      |...+.|+.|+++|++++++|+.+...+..++ .+|+..+
T Consensus        18 ~~~~~al~~l~~~Gi~~~~aTGR~~~~~~~~~~~l~~~~~   57 (225)
T TIGR01482        18 ESALEAIRKAESVGIPVVLVTGNSVQFARALAKLIGTPDP   57 (225)
T ss_pred             HHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHhCCCCe
Confidence            33456677888999999999999999888888 8887554

catalyze the same reaction as SPP.

>TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily

Probab=92.07  E-value=0.063  Score=43.94  Aligned_cols=14  Identities=21%  Similarity=0.330  Sum_probs=11.9

Q ss_pred             EEEECCCcccccch
Q 028799           86 VCFDVDSTVCVDEG   99 (203)
Q Consensus        86 VIFD~DGTLiDse~   99 (203)
                      ++|||||||+|++.
T Consensus         1 i~~DlDGTLl~~~~   14 (225)
T TIGR01482         1 IASDIDGTLTDPNR   14 (225)
T ss_pred             CeEeccCccCCCCc
Confidence            58999999999753

catalyze the same reaction as SPP.

>PRK01122 potassium-transporting ATPase subunit B; Provisional

Probab=92.05  E-value=0.27  Score=48.00  Aligned_cols=43  Identities=19%  Similarity=0.202  Sum_probs=40.1

Q ss_pred             CCCCcHHHHHHHHHHCCCeEEEEcCCCHHHHHHHH-HcCCCccc
Q 028799          155 RLSPGIDELVKKLKANNKNVYLISGGFRHMINILN-ILKWDVLK  197 (203)
Q Consensus       155 ~l~PG~~elL~~Lk~~G~~vaIVTn~~~~~i~~ll-~lGL~~~~  197 (203)
                      ++.||+.+.++.||+.|+++.++|+-....++.+. .+|+++++
T Consensus       445 ~~R~~~~eai~~Lr~~GI~vvMiTGDn~~TA~aIA~elGId~v~  488 (679)
T PRK01122        445 IVKPGIKERFAELRKMGIKTVMITGDNPLTAAAIAAEAGVDDFL  488 (679)
T ss_pred             cCchhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCcEEE
Confidence            67999999999999999999999999999999999 99998653

>PRK11033 zntA zinc/cadmium/mercury/lead-transporting ATPase; Provisional

Probab=91.94  E-value=0.28  Score=48.31  Aligned_cols=42  Identities=17%  Similarity=0.176  Sum_probs=39.6

Q ss_pred             CCCCCcHHHHHHHHHHCCCeEEEEcCCCHHHHHHHH-HcCCCc
Q 028799          154 PRLSPGIDELVKKLKANNKNVYLISGGFRHMINILN-ILKWDV  195 (203)
Q Consensus       154 ~~l~PG~~elL~~Lk~~G~~vaIVTn~~~~~i~~ll-~lGL~~  195 (203)
                      -+++||+.+.++.|+++|++++++||.....++.+. .+|++.
T Consensus       567 d~~r~~a~~~i~~L~~~gi~~~llTGd~~~~a~~ia~~lgi~~  609 (741)
T PRK11033        567 DTLRADARQAISELKALGIKGVMLTGDNPRAAAAIAGELGIDF  609 (741)
T ss_pred             cCCchhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCe
Confidence            479999999999999999999999999999999999 999974

>COG4030 Uncharacterized protein conserved in archaea [Function unknown]

Probab=91.93  E-value=0.99  Score=38.76  Aligned_cols=53  Identities=15%  Similarity=0.252  Sum_probs=42.6

Q ss_pred             CHHHHHHHHHhCCCCCCCcHHHHHHHHHHCCCeEEEEcCCCHHHHHHHH-HcCCCc
Q 028799          141 SLSQVQDFLEKRPPRLSPGIDELVKKLKANNKNVYLISGGFRHMINILN-ILKWDV  195 (203)
Q Consensus       141 ~~e~l~~~~~~~~~~l~PG~~elL~~Lk~~G~~vaIVTn~~~~~i~~ll-~lGL~~  195 (203)
                      +.++++++-+. ..++.||+.+.++.|.+. ++-+|+|.+.++.++++. .+|++.
T Consensus        70 t~~dlrr~sE~-sa~lvPgA~etm~~l~~~-~tp~v~STSY~qy~~r~a~~ig~Pr  123 (315)
T COG4030          70 TNRDLRRISEL-SAKLVPGAEETMATLQER-WTPVVISTSYTQYLRRTASMIGVPR  123 (315)
T ss_pred             cHHHHHHHHHh-hcccCCChHHHHHHHhcc-CCceEEeccHHHHHHHHHHhcCCCc
Confidence            45566666554 368999999999998865 788889999999999999 988853

>PTZ00445 p36-lilke protein; Provisional

Probab=91.73  E-value=0.19  Score=42.35  Aligned_cols=29  Identities=21%  Similarity=0.322  Sum_probs=23.7

Q ss_pred             CCCCcHHHHHHHHHHCCCeEEEEcCCCHH
Q 028799          155 RLSPGIDELVKKLKANNKNVYLISGGFRH  183 (203)
Q Consensus       155 ~l~PG~~elL~~Lk~~G~~vaIVTn~~~~  183 (203)
                      .+.|.+..++..|++.|++++|||=+...
T Consensus        75 ~~tpefk~~~~~l~~~~I~v~VVTfSd~~  103 (219)
T PTZ00445         75 SVTPDFKILGKRLKNSNIKISVVTFSDKE  103 (219)
T ss_pred             cCCHHHHHHHHHHHHCCCeEEEEEccchh
Confidence            46778888888999999999999877653

>PF11019 DUF2608: Protein of unknown function (DUF2608); InterPro: IPR022565 This family is conserved in Bacteria

Probab=91.63  E-value=1.6  Score=37.45  Aligned_cols=40  Identities=13%  Similarity=0.130  Sum_probs=31.9

Q ss_pred             CCCCcHHHHHHHHHHCCCeEEEEcCCCHHHHHH---HH-HcCCC
Q 028799          155 RLSPGIDELVKKLKANNKNVYLISGGFRHMINI---LN-ILKWD  194 (203)
Q Consensus       155 ~l~PG~~elL~~Lk~~G~~vaIVTn~~~~~i~~---ll-~lGL~  194 (203)
                      ..-+.+.++++.|+++|+++.-+|..+..+...   -+ .+|++
T Consensus        81 lie~~~~~~i~~lq~~~~~v~alT~~~~~~~~~t~~~Lk~~gi~  124 (252)
T PF11019_consen   81 LIESDVPNIINSLQNKGIPVIALTARGPNMEDWTLRELKSLGID  124 (252)
T ss_pred             EcchhHHHHHHHHHHCCCcEEEEcCCChhhHHHHHHHHHHCCCC
Confidence            466889999999999999999999998665443   34 66764

The function is not known.

>PLN03064 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional

Probab=91.58  E-value=0.5  Score=47.75  Aligned_cols=39  Identities=21%  Similarity=0.352  Sum_probs=33.2

Q ss_pred             CCCCCcHHHHHHHHHHC-CCeEEEEcCCCHHHHHHHH-HcC
Q 028799          154 PRLSPGIDELVKKLKAN-NKNVYLISGGFRHMINILN-ILK  192 (203)
Q Consensus       154 ~~l~PG~~elL~~Lk~~-G~~vaIVTn~~~~~i~~ll-~lG  192 (203)
                      ..+.|++.++|+.|.+. +-.++|+|+.....++.++ ..+
T Consensus       621 a~p~p~l~~~L~~L~~dp~n~VaIVSGR~~~~Le~~fg~~~  661 (934)
T PLN03064        621 LRLHPELKEPLRALCSDPKTTIVVLSGSDRSVLDENFGEFD  661 (934)
T ss_pred             cCCCHHHHHHHHHHHhCCCCeEEEEeCCCHHHHHHHhCCCC
Confidence            45778899999999876 7899999999999999988 544

>PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification []

Probab=91.50  E-value=0.38  Score=39.03  Aligned_cols=41  Identities=24%  Similarity=0.234  Sum_probs=35.3

Q ss_pred             CCCcHHHHHHHHHHCCCeEEEEcCCCHHHHHHHH-HcCCCcc
Q 028799          156 LSPGIDELVKKLKANNKNVYLISGGFRHMINILN-ILKWDVL  196 (203)
Q Consensus       156 l~PG~~elL~~Lk~~G~~vaIVTn~~~~~i~~ll-~lGL~~~  196 (203)
                      +.|...+.|+.|+++|++++++|+.+...+..++ .+++..+
T Consensus        16 i~~~~~~al~~l~~~g~~~~i~TGR~~~~~~~~~~~~~~~~~   57 (254)
T PF08282_consen   16 ISPETIEALKELQEKGIKLVIATGRSYSSIKRLLKELGIDDY   57 (254)
T ss_dssp             SCHHHHHHHHHHHHTTCEEEEECSSTHHHHHHHHHHTTHCSE
T ss_pred             eCHHHHHHHHhhcccceEEEEEccCcccccccccccccchhh
Confidence            4566678888999999999999999999999999 8888743

This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A ....

>PRK14010 potassium-transporting ATPase subunit B; Provisional

Probab=91.39  E-value=0.34  Score=47.31  Aligned_cols=44  Identities=11%  Similarity=0.115  Sum_probs=40.7

Q ss_pred             CCCCCcHHHHHHHHHHCCCeEEEEcCCCHHHHHHHH-HcCCCccc
Q 028799          154 PRLSPGIDELVKKLKANNKNVYLISGGFRHMINILN-ILKWDVLK  197 (203)
Q Consensus       154 ~~l~PG~~elL~~Lk~~G~~vaIVTn~~~~~i~~ll-~lGL~~~~  197 (203)
                      -++.||+.+.+++||+.|+++.++|+-....+..+. .+|+++++
T Consensus       440 Dp~R~~a~e~I~~Lr~~GI~vvMiTGDn~~TA~aIA~elGI~~v~  484 (673)
T PRK14010        440 DVIKDGLVERFRELREMGIETVMCTGDNELTAATIAKEAGVDRFV  484 (673)
T ss_pred             cCCcHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCceEE
Confidence            379999999999999999999999999999999999 99998643

>TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family

Probab=91.21  E-value=0.54  Score=39.62  Aligned_cols=36  Identities=14%  Similarity=0.114  Sum_probs=31.9

Q ss_pred             HHHHHHHHHHCCCeEEEEcCCCHHHHHHHH-HcCCCc
Q 028799          160 IDELVKKLKANNKNVYLISGGFRHMINILN-ILKWDV  195 (203)
Q Consensus       160 ~~elL~~Lk~~G~~vaIVTn~~~~~i~~ll-~lGL~~  195 (203)
                      ..+.++.|+++|++++++|+.+...+..++ .+|+..
T Consensus        21 ~~~~i~~l~~~g~~~~~~TgR~~~~~~~~~~~~~~~~   57 (256)
T TIGR01486        21 AKEVLERLQELGIPVIPCTSKTAAEVEYLRKELGLED   57 (256)
T ss_pred             HHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCCC
Confidence            577888889999999999999999999888 999864

This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta

>COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only]

Probab=91.14  E-value=0.45  Score=38.64  Aligned_cols=42  Identities=14%  Similarity=0.176  Sum_probs=35.9

Q ss_pred             CCCCcHHHHHHHHHHCCCeEEEEcCCCHHHHHHHH-HcCCCcc
Q 028799          155 RLSPGIDELVKKLKANNKNVYLISGGFRHMINILN-ILKWDVL  196 (203)
Q Consensus       155 ~l~PG~~elL~~Lk~~G~~vaIVTn~~~~~i~~ll-~lGL~~~  196 (203)
                      ...|.+.+-+..+++.|+++.|+||+...-+..+. .+|++.+
T Consensus        46 ~~tpe~~~W~~e~k~~gi~v~vvSNn~e~RV~~~~~~l~v~fi   88 (175)
T COG2179          46 DATPELRAWLAELKEAGIKVVVVSNNKESRVARAAEKLGVPFI   88 (175)
T ss_pred             CCCHHHHHHHHHHHhcCCEEEEEeCCCHHHHHhhhhhcCCcee
Confidence            45666777888899999999999999999999988 9998764

>PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification []

Probab=90.94  E-value=0.13  Score=41.80  Aligned_cols=13  Identities=23%  Similarity=0.383  Sum_probs=11.5

Q ss_pred             EEEECCCcccccc
Q 028799           86 VCFDVDSTVCVDE   98 (203)
Q Consensus        86 VIFD~DGTLiDse   98 (203)
                      |+||+||||+++.
T Consensus         1 i~~DlDGTLl~~~   13 (254)
T PF08282_consen    1 IFSDLDGTLLNSD   13 (254)
T ss_dssp             EEEECCTTTCSTT
T ss_pred             cEEEECCceecCC
Confidence            6899999999964

This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A ....

>PF08645 PNK3P: Polynucleotide kinase 3 phosphatase; InterPro: IPR013954 Polynucleotide kinase 3 phosphatases play a role in the repair of single breaks in DNA induced by DNA-damaging agents such as gamma radiation and camptothecin []

Probab=90.39  E-value=0.14  Score=40.76  Aligned_cols=25  Identities=16%  Similarity=0.534  Sum_probs=19.4

Q ss_pred             CCCcHHHHHHHHHHCCCeEEEEcCC
Q 028799          156 LSPGIDELVKKLKANNKNVYLISGG  180 (203)
Q Consensus       156 l~PG~~elL~~Lk~~G~~vaIVTn~  180 (203)
                      +.|++.+.|+.|++.|++++|+||=
T Consensus        30 ~~~~v~~~L~~l~~~Gy~IvIvTNQ   54 (159)
T PF08645_consen   30 FPPGVPEALRELHKKGYKIVIVTNQ   54 (159)
T ss_dssp             C-TTHHHHHHHHHHTTEEEEEEEE-
T ss_pred             cchhHHHHHHHHHhcCCeEEEEeCc
Confidence            3567888888888888888888874

; PDB: 2FPW_A 2FPR_A 2FPX_A 2FPS_A 2FPU_B 3ZVM_A 1YJ5_A 3ZVL_A 3U7E_B 3U7G_A ....

>TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily

Probab=89.98  E-value=0.16  Score=42.75  Aligned_cols=14  Identities=29%  Similarity=0.517  Sum_probs=12.1

Q ss_pred             EEEEECCCcccccc
Q 028799           85 AVCFDVDSTVCVDE   98 (203)
Q Consensus        85 aVIFD~DGTLiDse   98 (203)
                      +++|||||||++.+
T Consensus         1 li~~DlDGTLl~~~   14 (256)
T TIGR00099         1 LIFIDLDGTLLNDD   14 (256)
T ss_pred             CEEEeCCCCCCCCC
Confidence            47899999999974

The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences.

>COG2217 ZntA Cation transport ATPase [Inorganic ion transport and metabolism]

Probab=89.90  E-value=0.51  Score=46.35  Aligned_cols=44  Identities=25%  Similarity=0.354  Sum_probs=40.9

Q ss_pred             CCCCCcHHHHHHHHHHCCCeEEEEcCCCHHHHHHHH-HcCCCccc
Q 028799          154 PRLSPGIDELVKKLKANNKNVYLISGGFRHMINILN-ILKWDVLK  197 (203)
Q Consensus       154 ~~l~PG~~elL~~Lk~~G~~vaIVTn~~~~~i~~ll-~lGL~~~~  197 (203)
                      -++.|++.+.++.||++|+++.++|+-.+..++.+. .+|++.++
T Consensus       536 D~~R~~a~~aI~~L~~~Gi~~~mLTGDn~~~A~~iA~~lGId~v~  580 (713)
T COG2217         536 DELRPDAKEAIAALKALGIKVVMLTGDNRRTAEAIAKELGIDEVR  580 (713)
T ss_pred             CCCChhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcChHhhe
Confidence            479999999999999999999999999999999999 99997654

>KOG2470 consensus Similar to IMP-GMP specific 5'-nucleotidase [Nucleotide transport and metabolism]

Probab=89.65  E-value=0.89  Score=41.25  Aligned_cols=48  Identities=21%  Similarity=0.298  Sum_probs=38.3

Q ss_pred             CCCCcHHHHHHHHHHCCCeEEEEcCCCHHHHHHHH----HcCCCccceEEec
Q 028799          155 RLSPGIDELVKKLKANNKNVYLISGGFRHMINILN----ILKWDVLKVIQIT  202 (203)
Q Consensus       155 ~l~PG~~elL~~Lk~~G~~vaIVTn~~~~~i~~ll----~lGL~~~~~i~it  202 (203)
                      .--|....+++.|+++|.++.++||++..+++.-+    --+|.++++++|.
T Consensus       240 ~r~~ql~~fl~kL~~~GKklFLiTNSPysFVd~GM~flvG~~WRdlFDVVIv  291 (510)
T KOG2470|consen  240 ERNPQLLAFLRKLKDHGKKLFLITNSPYSFVDKGMRFLVGDDWRDLFDVVIV  291 (510)
T ss_pred             hccHHHHHHHHHHHHhcCcEEEEeCCchhhhhcCceeeeCccHHhhhheeEE
Confidence            34577889999999999999999999999987533    4456677777763

>TIGR01457 HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydrolase, TIGR01457

Probab=89.63  E-value=0.2  Score=42.56  Aligned_cols=17  Identities=18%  Similarity=0.221  Sum_probs=14.6

Q ss_pred             CcEEEEECCCcccccch
Q 028799           83 ADAVCFDVDSTVCVDEG   99 (203)
Q Consensus        83 ~kaVIFD~DGTLiDse~   99 (203)
                      ++.++||+||||++...
T Consensus         1 ~~~~~~D~DGtl~~~~~   17 (249)
T TIGR01457         1 YKGYLIDLDGTMYKGKE   17 (249)
T ss_pred             CCEEEEeCCCceEcCCe
Confidence            46899999999999763

This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in this model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those.

>TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein

Probab=89.47  E-value=0.18  Score=41.32  Aligned_cols=14  Identities=29%  Similarity=0.207  Sum_probs=12.0

Q ss_pred             EEEEECCCcccccc
Q 028799           85 AVCFDVDSTVCVDE   98 (203)
Q Consensus        85 aVIFD~DGTLiDse   98 (203)
                      .+++||||||++++
T Consensus         1 ~i~~DlDGTLL~~~   14 (221)
T TIGR02463         1 WVFSDLDGTLLDSH   14 (221)
T ss_pred             CEEEeCCCCCcCCC
Confidence            37899999999975

This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate.

>TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase

Probab=89.30  E-value=0.19  Score=42.06  Aligned_cols=13  Identities=23%  Similarity=0.312  Sum_probs=11.4

Q ss_pred             EEEEECCCccccc
Q 028799           85 AVCFDVDSTVCVD   97 (203)
Q Consensus        85 aVIFD~DGTLiDs   97 (203)
                      .++|||||||++.
T Consensus         1 li~~DlDGTLl~~   13 (225)
T TIGR02461         1 VIFTDLDGTLLPP   13 (225)
T ss_pred             CEEEeCCCCCcCC
Confidence            4789999999985

Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles.

>PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A

Probab=88.88  E-value=0.23  Score=36.52  Aligned_cols=14  Identities=21%  Similarity=0.394  Sum_probs=11.8

Q ss_pred             EEEECCCcccccch
Q 028799           86 VCFDVDSTVCVDEG   99 (203)
Q Consensus        86 VIFD~DGTLiDse~   99 (203)
                      ++||+||||++...
T Consensus         1 ~l~D~dGvl~~g~~   14 (101)
T PF13344_consen    1 FLFDLDGVLYNGNE   14 (101)
T ss_dssp             EEEESTTTSEETTE
T ss_pred             CEEeCccEeEeCCC
Confidence            68999999998643

...

>TIGR01460 HAD-SF-IIA Haloacid Dehalogenase Superfamily Class (subfamily) IIA

Probab=88.80  E-value=0.9  Score=38.14  Aligned_cols=48  Identities=27%  Similarity=0.301  Sum_probs=33.9

Q ss_pred             CCCCcHHHHHHHHHHCCCeEEEEcCCC---HHHH-HHHHH-cCCCccceEEec
Q 028799          155 RLSPGIDELVKKLKANNKNVYLISGGF---RHMI-NILNI-LKWDVLKVIQIT  202 (203)
Q Consensus       155 ~l~PG~~elL~~Lk~~G~~vaIVTn~~---~~~i-~~ll~-lGL~~~~~i~it  202 (203)
                      .++||+.+.++.++++|+++.++||+.   .... +.+.. +|++.-..=+||
T Consensus        14 ~~~~~a~e~i~~l~~~g~~~~~~tN~~~~~~~~~~~~l~~~~g~~~~~~~iit   66 (236)
T TIGR01460        14 KPIPGAAEALNRLRAKGKPVVFLTNNSSRSEEDYAEKLSSLLGVDVSPDQIIT   66 (236)
T ss_pred             ccCcCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHHhcCCCCCHHHeee
Confidence            358899999999999999999999776   2233 33444 787644444443

Many of the genes in this subfamily have been annotated as "pNPPase" "4-nitrophenyl phosphatase" or "NPPase". These all refer to the same activity versus a common lab test compound used to determine phosphatase activity. There is no evidence that this activity is physiologically relevant.

>TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458

Probab=88.60  E-value=0.24  Score=42.30  Aligned_cols=40  Identities=13%  Similarity=-0.014  Sum_probs=29.9

Q ss_pred             CCCcHHHHHHHHHHCCCeEEEEcCCCHHHHHHHH-HcCCCc
Q 028799          156 LSPGIDELVKKLKANNKNVYLISGGFRHMINILN-ILKWDV  195 (203)
Q Consensus       156 l~PG~~elL~~Lk~~G~~vaIVTn~~~~~i~~ll-~lGL~~  195 (203)
                      .++++.+.++.|++.|++++|+||..+....... .+|+..
T Consensus       121 ~y~~l~~a~~~L~~~~~~~~iatn~~~~~~~~~~~~~g~g~  161 (257)
T TIGR01458       121 SYQILNQAFRLLLDGAKPLLIAIGKGRYYKRKDGLALDVGP  161 (257)
T ss_pred             CHHHHHHHHHHHHcCCCCEEEEeCCCCCCcCCCCCCCCchH
Confidence            4678899999999999999999998766544333 444433

This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published.

>TIGR01647 ATPase-IIIA_H plasma-membrane proton-efflux P-type ATPase

Probab=87.94  E-value=0.91  Score=44.81  Aligned_cols=41  Identities=10%  Similarity=0.104  Sum_probs=38.9

Q ss_pred             CCCCcHHHHHHHHHHCCCeEEEEcCCCHHHHHHHH-HcCCCc
Q 028799          155 RLSPGIDELVKKLKANNKNVYLISGGFRHMINILN-ILKWDV  195 (203)
Q Consensus       155 ~l~PG~~elL~~Lk~~G~~vaIVTn~~~~~i~~ll-~lGL~~  195 (203)
                      ++.|++.+.++.|++.|+++.++|+-....+..+. .+|+..
T Consensus       442 p~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~~IA~~lGI~~  483 (755)
T TIGR01647       442 PPRHDTKETIERARHLGVEVKMVTGDHLAIAKETARRLGLGT  483 (755)
T ss_pred             CChhhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCC
Confidence            68999999999999999999999999999999999 999964

This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast.

>TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family

Probab=87.53  E-value=0.27  Score=41.51  Aligned_cols=15  Identities=27%  Similarity=0.319  Sum_probs=12.7

Q ss_pred             EEEEECCCcccccch
Q 028799           85 AVCFDVDSTVCVDEG   99 (203)
Q Consensus        85 aVIFD~DGTLiDse~   99 (203)
                      .++||+||||++++.
T Consensus         1 li~~DlDGTll~~~~   15 (256)
T TIGR01486         1 WIFTDLDGTLLDPHG   15 (256)
T ss_pred             CEEEcCCCCCcCCCC
Confidence            378999999999764

This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta

>PF03031 NIF: NLI interacting factor-like phosphatase; InterPro: IPR004274 The function of this domain is unclear

Probab=87.51  E-value=0.27  Score=38.31  Aligned_cols=39  Identities=21%  Similarity=0.330  Sum_probs=31.5

Q ss_pred             CCCCCcHHHHHHHHHHCCCeEEEEcCCCHHHHHHHH-HcCC
Q 028799          154 PRLSPGIDELVKKLKANNKNVYLISGGFRHMINILN-ILKW  193 (203)
Q Consensus       154 ~~l~PG~~elL~~Lk~~G~~vaIVTn~~~~~i~~ll-~lGL  193 (203)
                      +.+.||+.++|++|.+ .+.++|.|++....++.++ .++-
T Consensus        35 v~~RP~l~~FL~~l~~-~~ev~i~T~~~~~ya~~v~~~ldp   74 (159)
T PF03031_consen   35 VKLRPGLDEFLEELSK-HYEVVIWTSASEEYAEPVLDALDP   74 (159)
T ss_dssp             EEE-TTHHHHHHHHHH-HCEEEEE-SS-HHHHHHHHHHHTT
T ss_pred             EeeCchHHHHHHHHHH-hceEEEEEeehhhhhhHHHHhhhh
Confidence            5689999999999954 5999999999999999998 7764

It is found in proteins of diverse function including phosphatases some of which may be active in active in ternary elongation complexes and a number of NLI interacting factors. In the phospatases this domain is often present N-terminal to the BRCT domain (IPR001357 from INTERPRO).; GO: 0005515 protein binding; PDB: 3L0Y_A 2GHQ_A 3PGL_A 3L0C_B 1TA0_A 2GHT_A 3L0B_B 1T9Z_A 3QLE_A 2Q5E_E ....

>PF08645 PNK3P: Polynucleotide kinase 3 phosphatase; InterPro: IPR013954 Polynucleotide kinase 3 phosphatases play a role in the repair of single breaks in DNA induced by DNA-damaging agents such as gamma radiation and camptothecin []

Probab=86.96  E-value=0.55  Score=37.35  Aligned_cols=16  Identities=25%  Similarity=0.432  Sum_probs=11.8

Q ss_pred             cEEEEECCCcccccch
Q 028799           84 DAVCFDVDSTVCVDEG   99 (203)
Q Consensus        84 kaVIFD~DGTLiDse~   99 (203)
                      |.+.||+||||+.+.+
T Consensus         1 Kia~fD~DgTLi~~~s   16 (159)
T PF08645_consen    1 KIAFFDLDGTLIKTKS   16 (159)
T ss_dssp             SEEEE-SCTTTEE-ST
T ss_pred             CEEEEeCCCCccCCCC
Confidence            5789999999998654

; PDB: 2FPW_A 2FPR_A 2FPX_A 2FPS_A 2FPU_B 3ZVM_A 1YJ5_A 3ZVL_A 3U7E_B 3U7G_A ....

>KOG3128 consensus Uncharacterized conserved protein [Function unknown]

Probab=86.78  E-value=0.71  Score=40.03  Aligned_cols=55  Identities=20%  Similarity=0.335  Sum_probs=47.1

Q ss_pred             CHHHHHHHHHhCCCCCCCcHHHHHHHHHHCCCeEEEEcCCCHHHHHHHH--HcCCCc
Q 028799          141 SLSQVQDFLEKRPPRLSPGIDELVKKLKANNKNVYLISGGFRHMINILN--ILKWDV  195 (203)
Q Consensus       141 ~~e~l~~~~~~~~~~l~PG~~elL~~Lk~~G~~vaIVTn~~~~~i~~ll--~lGL~~  195 (203)
                      +..++.++..+..+.+..|..++++.|+.+++|+.|.|.|.-..++.++  ..++..
T Consensus       124 ~k~~I~~~Va~s~i~lReg~~~ff~~L~~~~IP~~iFSAGigdiiEev~~q~~~~~p  180 (298)
T KOG3128|consen  124 SKNAIDDIVAESNIALREGYEEFFEALQAHEIPLLIFSAGIGDIIEEVTRQKLVLHP  180 (298)
T ss_pred             CHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCceEEEecchHHHHHHHHHHHhccCc
Confidence            4677888887766789999999999999999999999999999998877  555544

>TIGR01460 HAD-SF-IIA Haloacid Dehalogenase Superfamily Class (subfamily) IIA

Probab=86.68  E-value=0.28  Score=41.19  Aligned_cols=14  Identities=21%  Similarity=0.489  Sum_probs=12.5

Q ss_pred             EEEECCCcccccch
Q 028799           86 VCFDVDSTVCVDEG   99 (203)
Q Consensus        86 VIFD~DGTLiDse~   99 (203)
                      ++||+||||++++.
T Consensus         1 ~lfD~DGvL~~~~~   14 (236)
T TIGR01460         1 FLFDIDGVLWLGHK   14 (236)
T ss_pred             CEEeCcCccCcCCc
Confidence            58999999999875

Many of the genes in this subfamily have been annotated as "pNPPase" "4-nitrophenyl phosphatase" or "NPPase". These all refer to the same activity versus a common lab test compound used to determine phosphatase activity. There is no evidence that this activity is physiologically relevant.

>COG2216 KdpB High-affinity K+ transport system, ATPase chain B [Inorganic ion transport and metabolism]

Probab=86.48  E-value=1  Score=42.74  Aligned_cols=44  Identities=18%  Similarity=0.198  Sum_probs=40.5

Q ss_pred             CCCCcHHHHHHHHHHCCCeEEEEcCCCHHHHHHHH-HcCCCccce
Q 028799          155 RLSPGIDELVKKLKANNKNVYLISGGFRHMINILN-ILKWDVLKV  198 (203)
Q Consensus       155 ~l~PG~~elL~~Lk~~G~~vaIVTn~~~~~i~~ll-~lGL~~~~~  198 (203)
                      .+.||+.|-+.+||+.|+++..+|+-..-.+..+. ..|+++|..
T Consensus       447 ivK~Gi~ERf~elR~MgIkTvM~TGDN~~TAa~IA~EAGVDdfiA  491 (681)
T COG2216         447 IVKPGIKERFAELRKMGIKTVMITGDNPLTAAAIAAEAGVDDFIA  491 (681)
T ss_pred             hcchhHHHHHHHHHhcCCeEEEEeCCCHHHHHHHHHHhCchhhhh
Confidence            47899999999999999999999999999999999 999998753

>COG5083 SMP2 Uncharacterized protein involved in plasmid maintenance [General function prediction only]

Probab=86.31  E-value=0.6  Score=43.39  Aligned_cols=29  Identities=21%  Similarity=0.549  Sum_probs=21.3

Q ss_pred             HhhccC-CcEEEEECCCcccccchHHHHHH
Q 028799           77 LQLWRT-ADAVCFDVDSTVCVDEGIDELAE  105 (203)
Q Consensus        77 ~~~~~~-~kaVIFD~DGTLiDse~~~~la~  105 (203)
                      +..|+. .+.|+||+||||+-++.|-.+.+
T Consensus       368 ifvwr~n~kiVVsDiDGTITkSD~~Ghv~~  397 (580)
T COG5083         368 IFVWRNNKKIVVSDIDGTITKSDALGHVKQ  397 (580)
T ss_pred             EEEEeCCCcEEEEecCCcEEehhhHHHHHH
Confidence            344665 46899999999999998744433

>TIGR01116 ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium-translocating P-type ATPase

Probab=85.82  E-value=1.3  Score=44.61  Aligned_cols=42  Identities=12%  Similarity=0.192  Sum_probs=38.7

Q ss_pred             CCCCCcHHHHHHHHHHCCCeEEEEcCCCHHHHHHHH-HcCCCc
Q 028799          154 PRLSPGIDELVKKLKANNKNVYLISGGFRHMINILN-ILKWDV  195 (203)
Q Consensus       154 ~~l~PG~~elL~~Lk~~G~~vaIVTn~~~~~i~~ll-~lGL~~  195 (203)
                      -+++||+.+.++.|++.|+++.++|+-....+..+. .+|+..
T Consensus       536 Dplr~~v~e~I~~l~~aGI~v~miTGD~~~tA~~ia~~~gi~~  578 (917)
T TIGR01116       536 DPPRPEVADAIEKCRTAGIRVIMITGDNKETAEAICRRIGIFS  578 (917)
T ss_pred             CCCchhHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHcCCCC
Confidence            368999999999999999999999999999999999 999853

The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1, the latter of which is modelled by TIGR01522.

>TIGR00685 T6PP trehalose-phosphatase

Probab=85.39  E-value=0.47  Score=39.98  Aligned_cols=15  Identities=33%  Similarity=0.344  Sum_probs=12.7

Q ss_pred             CcEEEEECCCccccc
Q 028799           83 ADAVCFDVDSTVCVD   97 (203)
Q Consensus        83 ~kaVIFD~DGTLiDs   97 (203)
                      ..+++||+||||++.
T Consensus         3 ~~~l~lD~DGTL~~~   17 (244)
T TIGR00685         3 KRAFFFDYDGTLSEI   17 (244)
T ss_pred             cEEEEEecCccccCC
Confidence            457899999999974

At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes.

>PF03031 NIF: NLI interacting factor-like phosphatase; InterPro: IPR004274 The function of this domain is unclear

Probab=85.28  E-value=1.3  Score=34.35  Aligned_cols=16  Identities=19%  Similarity=0.416  Sum_probs=12.8

Q ss_pred             cEEEEECCCcccccch
Q 028799           84 DAVCFDVDSTVCVDEG   99 (203)
Q Consensus        84 kaVIFD~DGTLiDse~   99 (203)
                      |.++||+||||+.+..
T Consensus         1 k~LVlDLD~TLv~~~~   16 (159)
T PF03031_consen    1 KTLVLDLDGTLVHSSS   16 (159)
T ss_dssp             EEEEEE-CTTTEEEES
T ss_pred             CEEEEeCCCcEEEEee
Confidence            5789999999999764

It is found in proteins of diverse function including phosphatases some of which may be active in active in ternary elongation complexes and a number of NLI interacting factors. In the phospatases this domain is often present N-terminal to the BRCT domain (IPR001357 from INTERPRO).; GO: 0005515 protein binding; PDB: 3L0Y_A 2GHQ_A 3PGL_A 3L0C_B 1TA0_A 2GHT_A 3L0B_B 1T9Z_A 3QLE_A 2Q5E_E ....

>TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial

Probab=85.25  E-value=0.41  Score=39.82  Aligned_cols=15  Identities=27%  Similarity=0.375  Sum_probs=12.3

Q ss_pred             EEEEECCCcccccch
Q 028799           85 AVCFDVDSTVCVDEG   99 (203)
Q Consensus        85 aVIFD~DGTLiDse~   99 (203)
                      ++++||||||++++.
T Consensus         1 li~~DlDgTLl~~~~   15 (236)
T TIGR02471         1 LIITDLDNTLLGDDE   15 (236)
T ss_pred             CeEEeccccccCCHH
Confidence            378899999999753

Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472.

>TIGR01517 ATPase-IIB_Ca plasma-membrane calcium-translocating P-type ATPase

Probab=84.22  E-value=2.3  Score=43.03  Aligned_cols=40  Identities=18%  Similarity=0.225  Sum_probs=38.2

Q ss_pred             CCCCcHHHHHHHHHHCCCeEEEEcCCCHHHHHHHH-HcCCC
Q 028799          155 RLSPGIDELVKKLKANNKNVYLISGGFRHMINILN-ILKWD  194 (203)
Q Consensus       155 ~l~PG~~elL~~Lk~~G~~vaIVTn~~~~~i~~ll-~lGL~  194 (203)
                      ++.|++.+.++.|++.|+++.++|+-....+..+. .+|+.
T Consensus       579 plr~~~~~aI~~l~~aGI~v~miTGD~~~tA~~iA~~~GI~  619 (941)
T TIGR01517       579 PLRPGVREAVQECQRAGITVRMVTGDNIDTAKAIARNCGIL  619 (941)
T ss_pred             CCchhHHHHHHHHHHCCCEEEEECCCChHHHHHHHHHcCCC
Confidence            78999999999999999999999999999999999 99995

The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1), which are modelled by the corresponding TIGR01116 and TIGR01522. This model is well separated from the two others.

>TIGR01524 ATPase-IIIB_Mg magnesium-translocating P-type ATPase

Probab=83.95  E-value=1.9  Score=43.35  Aligned_cols=40  Identities=18%  Similarity=0.144  Sum_probs=38.0

Q ss_pred             CCCCcHHHHHHHHHHCCCeEEEEcCCCHHHHHHHH-HcCCC
Q 028799          155 RLSPGIDELVKKLKANNKNVYLISGGFRHMINILN-ILKWD  194 (203)
Q Consensus       155 ~l~PG~~elL~~Lk~~G~~vaIVTn~~~~~i~~ll-~lGL~  194 (203)
                      ++.|++.+.++.|++.|+++.++|+-....+..+. .+|+.
T Consensus       515 p~R~~~~~aI~~l~~aGI~vvmiTGD~~~tA~aIA~~lGI~  555 (867)
T TIGR01524       515 PPKESTKEAIAALFKNGINVKVLTGDNEIVTARICQEVGID  555 (867)
T ss_pred             CCchhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCC
Confidence            68899999999999999999999999999999999 99996

The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis.

>COG0731 Fe-S oxidoreductases [Energy production and conversion]

Probab=83.76  E-value=2  Score=37.93  Aligned_cols=33  Identities=27%  Similarity=0.583  Sum_probs=29.9

Q ss_pred             CCCCCCcHHHHHHHHHHCC-CeEEEEcCCCHHHH
Q 028799          153 PPRLSPGIDELVKKLKANN-KNVYLISGGFRHMI  185 (203)
Q Consensus       153 ~~~l~PG~~elL~~Lk~~G-~~vaIVTn~~~~~i  185 (203)
                      ++.++|...++++.+|+.| .+++|+|||..+.+
T Consensus        90 EPTLy~~L~elI~~~k~~g~~~tflvTNgslpdv  123 (296)
T COG0731          90 EPTLYPNLGELIEEIKKRGKKTTFLVTNGSLPDV  123 (296)
T ss_pred             CcccccCHHHHHHHHHhcCCceEEEEeCCChHHH
Confidence            5789999999999999999 79999999998544

>PRK10517 magnesium-transporting ATPase MgtA; Provisional

Probab=83.34  E-value=1.9  Score=43.56  Aligned_cols=40  Identities=18%  Similarity=0.154  Sum_probs=38.2

Q ss_pred             CCCCcHHHHHHHHHHCCCeEEEEcCCCHHHHHHHH-HcCCC
Q 028799          155 RLSPGIDELVKKLKANNKNVYLISGGFRHMINILN-ILKWD  194 (203)
Q Consensus       155 ~l~PG~~elL~~Lk~~G~~vaIVTn~~~~~i~~ll-~lGL~  194 (203)
                      ++.|++.+.++.|++.|+++.++|+-....+..+. .+|+.
T Consensus       550 p~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~~IA~~lGI~  590 (902)
T PRK10517        550 PPKETTAPALKALKASGVTVKILTGDSELVAAKVCHEVGLD  590 (902)
T ss_pred             cchhhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCC
Confidence            68999999999999999999999999999999999 99996

>TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase

Probab=83.33  E-value=2.2  Score=35.83  Aligned_cols=39  Identities=10%  Similarity=0.072  Sum_probs=30.4

Q ss_pred             CcHHHHHHHHHHCCCeEEEEcCCCHHHHHHHH-HcCCCcc
Q 028799          158 PGIDELVKKLKANNKNVYLISGGFRHMINILN-ILKWDVL  196 (203)
Q Consensus       158 PG~~elL~~Lk~~G~~vaIVTn~~~~~i~~ll-~lGL~~~  196 (203)
                      |...++++.++++|++++++|+.+...+..+. .+++...
T Consensus        24 ~~~~~~i~~~~~~gi~fv~aTGR~~~~~~~~~~~~~~~~p   63 (249)
T TIGR01485        24 LRLNALLEDHRGEDSLLVYSTGRSPHSYKELQKQKPLLTP   63 (249)
T ss_pred             HHHHHHHHHhhccCceEEEEcCCCHHHHHHHHhcCCCCCC
Confidence            33456666778889999999999988888888 7887654

Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.

>PRK15122 magnesium-transporting ATPase; Provisional

Probab=83.07  E-value=1.9  Score=43.51  Aligned_cols=40  Identities=10%  Similarity=0.108  Sum_probs=38.2

Q ss_pred             CCCCcHHHHHHHHHHCCCeEEEEcCCCHHHHHHHH-HcCCC
Q 028799          155 RLSPGIDELVKKLKANNKNVYLISGGFRHMINILN-ILKWD  194 (203)
Q Consensus       155 ~l~PG~~elL~~Lk~~G~~vaIVTn~~~~~i~~ll-~lGL~  194 (203)
                      ++.|++.+.++.|++.|+++.++|+-....+..+. .+|+.
T Consensus       550 p~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~aIA~~lGI~  590 (903)
T PRK15122        550 PPKESAAPAIAALRENGVAVKVLTGDNPIVTAKICREVGLE  590 (903)
T ss_pred             ccHHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCC
Confidence            68899999999999999999999999999999999 99996

>TIGR01523 ATPase-IID_K-Na potassium and/or sodium efflux P-type ATPase, fungal-type

Probab=82.90  E-value=2.1  Score=43.94  Aligned_cols=41  Identities=15%  Similarity=0.113  Sum_probs=38.8

Q ss_pred             CCCCCcHHHHHHHHHHCCCeEEEEcCCCHHHHHHHH-HcCCC
Q 028799          154 PRLSPGIDELVKKLKANNKNVYLISGGFRHMINILN-ILKWD  194 (203)
Q Consensus       154 ~~l~PG~~elL~~Lk~~G~~vaIVTn~~~~~i~~ll-~lGL~  194 (203)
                      -++.|++.+.++.|++.|+++.++|+-....+..+. .+|+.
T Consensus       645 Dp~r~~v~~aI~~l~~aGIkv~MiTGD~~~tA~~iA~~~Gi~  686 (1053)
T TIGR01523       645 DPPRNESAGAVEKCHQAGINVHMLTGDFPETAKAIAQEVGII  686 (1053)
T ss_pred             cCCchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCC
Confidence            479999999999999999999999999999999999 99994

The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump.

>TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase

Probab=82.24  E-value=0.75  Score=36.64  Aligned_cols=13  Identities=31%  Similarity=0.562  Sum_probs=11.8

Q ss_pred             cEEEEECCCcccc
Q 028799           84 DAVCFDVDSTVCV   96 (203)
Q Consensus        84 kaVIFD~DGTLiD   96 (203)
                      ++++||.||||+.
T Consensus         2 ~~~~~D~Dgtl~~   14 (176)
T TIGR00213         2 KAIFLDRDGTINI   14 (176)
T ss_pred             CEEEEeCCCCEeC
Confidence            6899999999994

This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812).

>PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases

Probab=82.09  E-value=1.5  Score=35.57  Aligned_cols=18  Identities=28%  Similarity=0.331  Sum_probs=15.5

Q ss_pred             ccCCcEEEEECCCccccc
Q 028799           80 WRTADAVCFDVDSTVCVD   97 (203)
Q Consensus        80 ~~~~kaVIFD~DGTLiDs   97 (203)
                      ..++++++||+|+||+.-
T Consensus        38 ~~Gik~li~DkDNTL~~~   55 (168)
T PF09419_consen   38 KKGIKALIFDKDNTLTPP   55 (168)
T ss_pred             hcCceEEEEcCCCCCCCC
Confidence            467999999999999863

All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family.

>COG0474 MgtA Cation transport ATPase [Inorganic ion transport and metabolism]

Probab=82.00  E-value=3.4  Score=41.78  Aligned_cols=44  Identities=11%  Similarity=0.178  Sum_probs=40.4

Q ss_pred             CCCCCcHHHHHHHHHHCCCeEEEEcCCCHHHHHHHH-HcCCCccc
Q 028799          154 PRLSPGIDELVKKLKANNKNVYLISGGFRHMINILN-ILKWDVLK  197 (203)
Q Consensus       154 ~~l~PG~~elL~~Lk~~G~~vaIVTn~~~~~i~~ll-~lGL~~~~  197 (203)
                      -+|.|++.+.++.|++.|+++.++|+=....+..+. .+|+..-.
T Consensus       546 Dppr~~v~~aI~~l~~AGI~v~MiTGD~~~TA~aIa~~~Gi~~~~  590 (917)
T COG0474         546 DPPREDVKEAIEELREAGIKVWMITGDHVETAIAIAKECGIEAEA  590 (917)
T ss_pred             CCCCccHHHHHHHHHHCCCcEEEECCCCHHHHHHHHHHcCCCCCC
Confidence            489999999999999999999999999999999999 99986544

>COG3769 Predicted hydrolase (HAD superfamily) [General function prediction only]

Probab=81.78  E-value=2.7  Score=35.92  Aligned_cols=37  Identities=24%  Similarity=0.147  Sum_probs=31.2

Q ss_pred             HHHHHHHHHCCCeEEEEcCCCHHHHHHHH-HcCCCccc
Q 028799          161 DELVKKLKANNKNVYLISGGFRHMINILN-ILKWDVLK  197 (203)
Q Consensus       161 ~elL~~Lk~~G~~vaIVTn~~~~~i~~ll-~lGL~~~~  197 (203)
                      .+.+..|++.|++++.+||+.+..+..+. .+|+....
T Consensus        29 ~pv~~el~d~G~~Vi~~SSKT~aE~~~l~~~l~v~~~p   66 (274)
T COG3769          29 APVLLELKDAGVPVILCSSKTRAEMLYLQKSLGVQGLP   66 (274)
T ss_pred             chHHHHHHHcCCeEEEeccchHHHHHHHHHhcCCCCCc
Confidence            45677889999999999999999988888 99988533

>KOG2882 consensus p-Nitrophenyl phosphatase [Inorganic ion transport and metabolism]

Probab=81.50  E-value=2.7  Score=37.14  Aligned_cols=41  Identities=17%  Similarity=0.212  Sum_probs=33.0

Q ss_pred             CCCCcHHHHHHHHHHCCCeEEEEcCCCHHHHHH---HH-HcCCCc
Q 028799          155 RLSPGIDELVKKLKANNKNVYLISGGFRHMINI---LN-ILKWDV  195 (203)
Q Consensus       155 ~l~PG~~elL~~Lk~~G~~vaIVTn~~~~~i~~---ll-~lGL~~  195 (203)
                      .+.||+.|.++.|++.|.++.++||.+...-+.   .. ++|+..
T Consensus        38 ~~ipGs~e~l~~L~~~gK~i~fvTNNStksr~~y~kK~~~lG~~~   82 (306)
T KOG2882|consen   38 KPIPGSPEALNLLKSLGKQIIFVTNNSTKSREQYMKKFAKLGFNS   82 (306)
T ss_pred             CCCCChHHHHHHHHHcCCcEEEEeCCCcchHHHHHHHHHHhCccc
Confidence            579999999999999999999999998664432   23 777764

>COG5663 Uncharacterized conserved protein [Function unknown]

Probab=80.63  E-value=0.9  Score=37.10  Aligned_cols=31  Identities=13%  Similarity=0.225  Sum_probs=21.3

Q ss_pred             CCCCCcHHHHHHHHHHCCCeEEEEcCCCHHHH
Q 028799          154 PRLSPGIDELVKKLKANNKNVYLISGGFRHMI  185 (203)
Q Consensus       154 ~~l~PG~~elL~~Lk~~G~~vaIVTn~~~~~i  185 (203)
                      ..+-.++...|..+++. .+++-+|+--+.+.
T Consensus        71 ~l~~q~v~~~L~~~~e~-~~L~~itar~~dl~  101 (194)
T COG5663          71 ALLAQLVKQVLPSLKEE-HRLIYITARKADLT  101 (194)
T ss_pred             HHHHHHHHHHhHHHHhh-ceeeeeehhhHHHH
Confidence            35566788888887765 77777777655543

>COG0241 HisB Histidinol phosphatase and related phosphatases [Amino acid transport and metabolism]

Probab=80.57  E-value=1.9  Score=35.32  Aligned_cols=25  Identities=16%  Similarity=0.369  Sum_probs=24.0

Q ss_pred             CCCCcHHHHHHHHHHCCCeEEEEcC
Q 028799          155 RLSPGIDELVKKLKANNKNVYLISG  179 (203)
Q Consensus       155 ~l~PG~~elL~~Lk~~G~~vaIVTn  179 (203)
                      .+.||+.+.+..|++.|++++++||
T Consensus        31 ~~~~g~i~al~~l~~~gy~lVvvTN   55 (181)
T COG0241          31 QFIPGVIPALLKLQRAGYKLVVVTN   55 (181)
T ss_pred             ccCccHHHHHHHHHhCCCeEEEEEC
Confidence            6799999999999999999999999

>TIGR01106 ATPase-IIC_X-K sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit

Probab=80.51  E-value=2.6  Score=42.92  Aligned_cols=40  Identities=10%  Similarity=0.138  Sum_probs=37.8

Q ss_pred             CCCCCcHHHHHHHHHHCCCeEEEEcCCCHHHHHHHH-HcCC
Q 028799          154 PRLSPGIDELVKKLKANNKNVYLISGGFRHMINILN-ILKW  193 (203)
Q Consensus       154 ~~l~PG~~elL~~Lk~~G~~vaIVTn~~~~~i~~ll-~lGL  193 (203)
                      -++.|++.+.++.|+++|+++.++|+-....+..+. .+|+
T Consensus       567 Dplr~~v~~aI~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi  607 (997)
T TIGR01106       567 DPPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKGVGI  607 (997)
T ss_pred             CCChHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCC
Confidence            378999999999999999999999999999999999 9998

Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps.

>TIGR01657 P-ATPase-V P-type ATPase of unknown pump specificity (type V)

Probab=80.46  E-value=3.1  Score=42.67  Aligned_cols=40  Identities=20%  Similarity=0.209  Sum_probs=38.1

Q ss_pred             CCCCCcHHHHHHHHHHCCCeEEEEcCCCHHHHHHHH-HcCC
Q 028799          154 PRLSPGIDELVKKLKANNKNVYLISGGFRHMINILN-ILKW  193 (203)
Q Consensus       154 ~~l~PG~~elL~~Lk~~G~~vaIVTn~~~~~i~~ll-~lGL  193 (203)
                      -++.|++.+.++.|++.|+++.++||-....+..+. .+|+
T Consensus       655 d~lr~~~~~~I~~l~~agi~v~miTGD~~~TA~~iA~~~gi  695 (1054)
T TIGR01657       655 NPLKPDTKEVIKELKRASIRTVMITGDNPLTAVHVARECGI  695 (1054)
T ss_pred             cCCCccHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCC
Confidence            379999999999999999999999999999999999 9998

These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in.

>PLN03017 trehalose-phosphatase

Probab=80.33  E-value=1.5  Score=39.88  Aligned_cols=21  Identities=19%  Similarity=0.396  Sum_probs=14.5

Q ss_pred             HHHhhccCCc-EEEEECCCccc
Q 028799           75 EVLQLWRTAD-AVCFDVDSTVC   95 (203)
Q Consensus        75 ~~~~~~~~~k-aVIFD~DGTLi   95 (203)
                      ++.......+ ++++|+||||+
T Consensus       102 ~~~~~~~~k~~llflD~DGTL~  123 (366)
T PLN03017        102 QIMEASRGKQIVMFLDYDGTLS  123 (366)
T ss_pred             HHHHHhcCCCeEEEEecCCcCc
Confidence            4555555544 55669999999

>PRK06769 hypothetical protein; Validated

Probab=80.17  E-value=1.1  Score=35.70  Aligned_cols=18  Identities=28%  Similarity=0.333  Sum_probs=14.8

Q ss_pred             ccCCcEEEEECCCccccc
Q 028799           80 WRTADAVCFDVDSTVCVD   97 (203)
Q Consensus        80 ~~~~kaVIFD~DGTLiDs   97 (203)
                      +.++++++||.||||.-.
T Consensus         1 ~~~~~~~~~d~d~~~~~~   18 (173)
T PRK06769          1 MTNIQAIFIDRDGTIGGD   18 (173)
T ss_pred             CCCCcEEEEeCCCcccCC
Confidence            367899999999999443

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	203
1l8l_A	225	Molecular Basis For The Local Confomational Rearran		5e-29
1nnl_A	225	Crystal Structure Of Human Phosphoserine Phosphatas		6e-29
3n28_A	335	Crystal Structure Of Probable Phosphoserine Phospha		2e-08
1f5s_A	211	Crystal Structure Of Phosphoserine Phosphatase From		1e-07
1l7m_A	211	High Resolution Liganded Structure Of Phosphoserine		7e-07
1j97_A	211	Phospho-Aspartyl Intermediate Analogue Of Phosphose		9e-07
1l7o_A	211	Crystal Structure Of Phosphoserine Phosphatase In A		2e-06
4eze_A	317	Crystal Structure Of Had Family Hydrolase T0658 Fro		2e-05
3p96_A	415	Crystal Structure Of Phosphoserine Phosphatase Serb		6e-04

>pdb|1L8L|A Chain A, Molecular Basis For The Local Confomational Rearrangement Of Human Phosphoserine Phosphatase Length = 225

Iteration: 1
 Score =  123 bits (309), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 64/126 (50%), Positives = 83/126 (65%), Gaps = 4/126 (3%)
Query: 75  EVLQLWRTADAVCFDVDSTVCVDEGIDELAEFCGAGKAVAEWTARAMGGSVPFEEALAAR 134
           E+ +L+ +ADAVCFDVDSTV  +EGIDELA+ CG   AV+E T RAMGG+VPF+ AL  R
Sbjct: 6   ELRKLFYSADAVCFDVDSTVIREEGIDELAKICGVEDAVSEMTRRAMGGAVPFKAALTER 65
Query: 135 LSLFKPSLSQVQDFLEKRPPRLSPGIDEXXXXXXXXXXXXYLISGGFR----HMINILNI 190
           L+L +PS  QVQ  + ++PP L+PGI E            +LISGGFR    H+ + LNI
Sbjct: 66  LALIQPSREQVQRLIAEQPPHLTPGIRELVSRLQERNVQVFLISGGFRSIVEHVASKLNI 125
Query: 191 LKWDVL 196
              +V 
Sbjct: 126 PATNVF 131

>pdb|1NNL|A Chain A, Crystal Structure Of Human Phosphoserine Phosphatase Length = 225

Iteration: 1
 Score =  123 bits (309), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 64/126 (50%), Positives = 83/126 (65%), Gaps = 4/126 (3%)
Query: 75  EVLQLWRTADAVCFDVDSTVCVDEGIDELAEFCGAGKAVAEWTARAMGGSVPFEEALAAR 134
           E+ +L+ +ADAVCFDVDSTV  +EGIDELA+ CG   AV+E T RAMGG+VPF+ AL  R
Sbjct: 6   ELRKLFYSADAVCFDVDSTVIREEGIDELAKICGVEDAVSEMTRRAMGGAVPFKAALTER 65
Query: 135 LSLFKPSLSQVQDFLEKRPPRLSPGIDEXXXXXXXXXXXXYLISGGFR----HMINILNI 190
           L+L +PS  QVQ  + ++PP L+PGI E            +LISGGFR    H+ + LNI
Sbjct: 66  LALIQPSREQVQRLIAEQPPHLTPGIRELVSRLQERNVQVFLISGGFRSIVEHVASKLNI 125
Query: 191 LKWDVL 196
              +V 
Sbjct: 126 PATNVF 131

>pdb|3N28|A Chain A, Crystal Structure Of Probable Phosphoserine Phosphatase From Vibrio Cholerae, Unliganded Form Length = 335

Iteration: 1
 Score = 55.8 bits (133), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 35/104 (33%), Positives = 52/104 (50%), Gaps = 1/104 (0%)
Query: 86  VCFDVDSTVCVDEGIDELAEFCGAGKAVAEWTARAMGGSVPFEEALAARLSLFKPSLSQV 145
           +  D+DST    E IDE+A+  G G+ VAE T RAM G + FE++L  R+S  K +  Q+
Sbjct: 110 IVLDMDSTAIQIECIDEIAKLAGVGEEVAEVTERAMQGELDFEQSLRLRVSKLKDAPEQI 169
Query: 146 QDFLEKRPPRLSPGIDEXXXXXXXXXXXXYLISGGFRHMINILN 189
              + +  P L P + E             + SGGF +  + L 
Sbjct: 170 LSQVRETLP-LMPELPELVATLHAFGWKVAIASGGFTYFSDYLK 212

>pdb|1F5S|A Chain A, Crystal Structure Of Phosphoserine Phosphatase From Methanococcus Jannaschii Length = 211

Iteration: 1
 Score = 53.1 bits (126), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 32/102 (31%), Positives = 53/102 (51%), Gaps = 3/102 (2%)
Query: 86  VCFDVDSTVCVDEGIDELAEFCGAGKAVAEWTARAMGGSVPFEEALAARLSLFKP-SLSQ 144
           + FD DST+  +E IDE+A   G  + V + T  AM G + FE++L  R+SL K   + +
Sbjct: 8   ILFDFDSTLVNNETIDEIAREAGVEEEVKKITKEAMEGKLNFEQSLRKRVSLLKDLPIEK 67
Query: 145 VQDFLEKRPPRLSPGIDEXXXXXXXXXXXXYLISGGFRHMIN 186
           V+  +++  P  + G +E             ++SGGF   +N
Sbjct: 68  VEKAIKRITP--TEGAEETIKELKNRGYVVAVVSGGFDIAVN 107

>pdb|1L7M|A Chain A, High Resolution Liganded Structure Of Phosphoserine Phosphatase (Pi Complex) Length = 211

Iteration: 1
 Score = 50.4 bits (119), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 31/102 (30%), Positives = 52/102 (50%), Gaps = 3/102 (2%)
Query: 86  VCFDVDSTVCVDEGIDELAEFCGAGKAVAEWTARAMGGSVPFEEALAARLSLFKP-SLSQ 144
           + FD DST+  +E IDE+A   G  + V + T  A  G + FE++L  R+SL K   + +
Sbjct: 8   ILFDFDSTLVNNETIDEIAREAGVEEEVKKITKEAXEGKLNFEQSLRKRVSLLKDLPIEK 67
Query: 145 VQDFLEKRPPRLSPGIDEXXXXXXXXXXXXYLISGGFRHMIN 186
           V+  +++  P  + G +E             ++SGGF   +N
Sbjct: 68  VEKAIKRITP--TEGAEETIKELKNRGYVVAVVSGGFDIAVN 107

>pdb|1J97|A Chain A, Phospho-Aspartyl Intermediate Analogue Of Phosphoserine Phosphatase Length = 211

Iteration: 1
 Score = 50.1 bits (118), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 31/102 (30%), Positives = 52/102 (50%), Gaps = 3/102 (2%)
Query: 86  VCFDVDSTVCVDEGIDELAEFCGAGKAVAEWTARAMGGSVPFEEALAARLSLFKP-SLSQ 144
           + F  DST+  +E IDE+A   G  + V + T  AM G + FE++L  R+SL K   + +
Sbjct: 8   ILFXFDSTLVNNETIDEIAREAGVEEEVKKITKEAMEGKLNFEQSLRKRVSLLKDLPIEK 67
Query: 145 VQDFLEKRPPRLSPGIDEXXXXXXXXXXXXYLISGGFRHMIN 186
           V+  +++  P  + G +E             ++SGGF   +N
Sbjct: 68  VEKAIKRITP--TEGAEETIKELKNRGYVVAVVSGGFDIAVN 107

>pdb|1L7O|A Chain A, Crystal Structure Of Phosphoserine Phosphatase In Apo Form Length = 211

Iteration: 1
 Score = 48.5 bits (114), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 30/102 (29%), Positives = 52/102 (50%), Gaps = 3/102 (2%)
Query: 86  VCFDVDSTVCVDEGIDELAEFCGAGKAVAEWTARAMGGSVPFEEALAARLSLFKP-SLSQ 144
           + F+ DST+  +E IDE+A   G  + V + T  A  G + FE++L  R+SL K   + +
Sbjct: 8   ILFNFDSTLVNNETIDEIAREAGVEEEVKKITKEAXEGKLNFEQSLRKRVSLLKDLPIEK 67
Query: 145 VQDFLEKRPPRLSPGIDEXXXXXXXXXXXXYLISGGFRHMIN 186
           V+  +++  P  + G +E             ++SGGF   +N
Sbjct: 68  VEKAIKRITP--TEGAEETIKELKNRGYVVAVVSGGFDIAVN 107

>pdb|4EZE|A Chain A, Crystal Structure Of Had Family Hydrolase T0658 From Salmonella Enterica Subsp. Enterica Serovar Typhi (Target Efi-501419) Length = 317

Iteration: 1
 Score = 45.8 bits (107), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 28/96 (29%), Positives = 44/96 (45%), Gaps = 1/96 (1%)
Query: 86  VCFDVDSTVCVDEGIDELAEFCGAGKAVAEWTARAMGGSVPFEEALAARLSLFKPSLSQV 145
           + FD+DST   +EG+DE+A   G    +   T +AM G + F  +   R+ + K +   V
Sbjct: 111 IAFDMDSTFIAEEGVDEIARELGMSTQITAITQQAMEGKLDFNASFTRRIGMLKGTPKAV 170
Query: 146 QDFLEKRPPRLSPGIDEXXXXXXXXXXXXYLISGGF 181
            + +  R   LSPG+               +ISGG 
Sbjct: 171 LNAVCDR-MTLSPGLLTILPVIKAKGFKTAIISGGL 205

>pdb|3P96|A Chain A, Crystal Structure Of Phosphoserine Phosphatase Serb From Mycobacterium Avium, Native Form Length = 415

Iteration: 1
 Score = 40.8 bits (94), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 42/142 (29%), Positives = 61/142 (42%), Gaps = 9/142 (6%)
Query: 55  SVQPLEASALGRSENTLPSKEVLQLW--------RTADAVCFDVDSTVCVDEGIDELAEF 106
           SV P    AL  + N + S+E + +         R    + FDVDST+   E I+ LA  
Sbjct: 149 SVPPGADEALRTALNRVSSEEHVDVAVEDYTLERRAKRLIVFDVDSTLVQGEVIEMLAAK 208
Query: 107 CGAGKAVAEWTARAMGGSVPFEEALAARLSLFKPSLSQVQDFLEKRPPRLSPGIDEXXXX 166
            GA   VA  T  AM G + F ++L  R++      + V D +  +   L PG       
Sbjct: 209 AGAEGQVAAITDAAMRGELDFAQSLQQRVATLAGLPATVIDEVAGQ-LELMPGARTTLRT 267
Query: 167 XXXXXXXXYLISGGFRHMINIL 188
                    ++SGGFR +I  L
Sbjct: 268 LRRLGYACGVVSGGFRRIIEPL 289

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	203
1nnl_A	225	L-3-phosphoserine phosphatase; PSP, HPSP, phospho-	2e-54
3kd3_A	219	Phosphoserine phosphohydrolase-like protein; csgid	6e-44
2fea_A	236	2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate	4e-33
1l7m_A	211	Phosphoserine phosphatase; rossmann fold, four-hel	4e-31
4eze_A	317	Haloacid dehalogenase-like hydrolase; magnesium bi	1e-29
3n28_A	335	Phosphoserine phosphatase; HAD family hydrolase, s	1e-28
3m1y_A	217	Phosphoserine phosphatase (SERB); NYSGXRC, PSI II,	2e-28
3p96_A	415	Phosphoserine phosphatase SERB; ssgcid, structural	3e-20
1rku_A	206	Homoserine kinase; phosphoserine phosphatase, phos	3e-19
3fvv_A	232	Uncharacterized protein; unknown function, structu	6e-12
2g09_A	297	Cytosolic 5'-nucleotidase III; uniprot Q9D020, UMP	2e-05

>1nnl_A L-3-phosphoserine phosphatase; PSP, HPSP, phospho-aspartyl, hydrolase; 1.53A {Homo sapiens} SCOP: c.108.1.4 PDB: 1l8l_A* 1l8o_A Length = 225

 Score =  172 bits (438), Expect = 2e-54
 Identities = 64/116 (55%), Positives = 85/116 (73%)

Query: 71  LPSKEVLQLWRTADAVCFDVDSTVCVDEGIDELAEFCGAGKAVAEWTARAMGGSVPFEEA 130
           +   E+ +L+ +ADAVCFDVDSTV  +EGIDELA+ CG   AV+E T RAMGG+VPF+ A
Sbjct: 2   ISHSELRKLFYSADAVCFDVDSTVIREEGIDELAKICGVEDAVSEMTRRAMGGAVPFKAA 61

Query: 131 LAARLSLFKPSLSQVQDFLEKRPPRLSPGIDELVKKLKANNKNVYLISGGFRHMIN 186
           L  RL+L +PS  QVQ  + ++PP L+PGI ELV +L+  N  V+LISGGFR ++ 
Sbjct: 62  LTERLALIQPSREQVQRLIAEQPPHLTPGIRELVSRLQERNVQVFLISGGFRSIVE 117

>3kd3_A Phosphoserine phosphohydrolase-like protein; csgid, niaid, S genomics, national institute of allergy and infectious DISE (niaid); 1.70A {Francisella tularensis subsp} Length = 219

 Score =  145 bits (367), Expect = 6e-44
 Identities = 31/112 (27%), Positives = 51/112 (45%), Gaps = 6/112 (5%)

Query: 81  RTADAVCFDVDSTVCVDEGIDE-----LAEFCGAGKAVAEWTARAMGGSVPFEEALAARL 135
                + FD DST+   E ++      L +     K +   T   M G + F ++L  RL
Sbjct: 2   NAMKNIIFDFDSTLIKKESLELILEPILQKSPAKLKEIEYITNLGMQGDISFRDSLQKRL 61

Query: 136 SLFKPSLSQVQDFLEKRPP-RLSPGIDELVKKLKANNKNVYLISGGFRHMIN 186
           ++  P+   +++F  K  P  L+ GI ELV+ LK     +++ SGG    I 
Sbjct: 62  AIASPTKQSIKEFSNKYCPNLLTDGIKELVQDLKNKGFEIWIFSGGLSESIQ 113

>2fea_A 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; 2633731, structural genomics, joint center for structural GE JCSG; HET: MSE; 2.00A {Bacillus subtilis} SCOP: c.108.1.20 Length = 236

 Score =  117 bits (296), Expect = 4e-33
 Identities = 16/102 (15%), Positives = 35/102 (34%), Gaps = 1/102 (0%)

Query: 85  AVCFDVDSTVCVDEGIDELAEFCGAGKAVAEWTARAMGGSVPFEEALAARLSLFKPSLSQ 144
            +  D D T+ +++ I  + +               +  ++  +E +     L   SL +
Sbjct: 8   FIICDFDGTITMNDNIINIMKTFA-PPEWMALKDGVLSKTLSIKEGVGRMFGLLPSSLKE 66

Query: 145 VQDFLEKRPPRLSPGIDELVKKLKANNKNVYLISGGFRHMIN 186
                     ++  G  E V  +  +    Y+ISGG    + 
Sbjct: 67  EITSFVLEDAKIREGFREFVAFINEHEIPFYVISGGMDFFVY 108

>1l7m_A Phosphoserine phosphatase; rossmann fold, four-helix bundle, B-hairpin, structural genomics, BSGC structure funded by NIH; 1.48A {Methanocaldococcus jannaschii} SCOP: c.108.1.4 PDB: 1f5s_A 1l7n_A 1l7p_A* 1l7o_A* 1j97_A* Length = 211

 Score =  111 bits (281), Expect = 4e-31
 Identities = 35/111 (31%), Positives = 61/111 (54%), Gaps = 3/111 (2%)

Query: 79  LWRTADAVCFDVDSTVCVDEGIDELAEFCGAGKAVAEWTARAMGGSVPFEEALAARLSLF 138
           + +    + FD DST+  +E IDE+A   G  + V + T  AM G + FE++L  R+SL 
Sbjct: 1   MEKKKKLILFDFDSTLVNNETIDEIAREAGVEEEVKKITKEAMEGKLNFEQSLRKRVSLL 60

Query: 139 KP-SLSQVQDFLEKRPPRLSPGIDELVKKLKANNKNVYLISGGFRHMINIL 188
           K   + +V+  +++     + G +E +K+LK     V ++SGGF   +N +
Sbjct: 61  KDLPIEKVEKAIKRIT--PTEGAEETIKELKNRGYVVAVVSGGFDIAVNKI 109

>4eze_A Haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 2.27A {Salmonella enterica subsp} Length = 317

 Score =  110 bits (277), Expect = 1e-29
 Identities = 31/103 (30%), Positives = 50/103 (48%), Gaps = 1/103 (0%)

Query: 86  VCFDVDSTVCVDEGIDELAEFCGAGKAVAEWTARAMGGSVPFEEALAARLSLFKPSLSQV 145
           + FD+DST   +EG+DE+A   G    +   T +AM G + F  +   R+ + K +   V
Sbjct: 111 IAFDMDSTFIAEEGVDEIARELGMSTQITAITQQAMEGKLDFNASFTRRIGMLKGTPKAV 170

Query: 146 QDFLEKRPPRLSPGIDELVKKLKANNKNVYLISGGFRHMINIL 188
            + +  R   LSPG+  ++  +KA      +ISGG       L
Sbjct: 171 LNAVCDRMT-LSPGLLTILPVIKAKGFKTAIISGGLDIFTQRL 212

>3n28_A Phosphoserine phosphatase; HAD family hydrolase, structural genomics, PSI, protein STRU initiative, nysgrc; 2.30A {Vibrio cholerae} Length = 335

 Score =  108 bits (271), Expect = 1e-28
 Identities = 40/109 (36%), Positives = 57/109 (52%), Gaps = 1/109 (0%)

Query: 80  WRTADAVCFDVDSTVCVDEGIDELAEFCGAGKAVAEWTARAMGGSVPFEEALAARLSLFK 139
                 +  D+DST    E IDE+A+  G G+ VAE T RAM G + FE++L  R+S  K
Sbjct: 104 LTKPGLIVLDMDSTAIQIECIDEIAKLAGVGEEVAEVTERAMQGELDFEQSLRLRVSKLK 163

Query: 140 PSLSQVQDFLEKRPPRLSPGIDELVKKLKANNKNVYLISGGFRHMINIL 188
            +  Q+   + +  P L P + ELV  L A    V + SGGF +  + L
Sbjct: 164 DAPEQILSQVRETLP-LMPELPELVATLHAFGWKVAIASGGFTYFSDYL 211

>3m1y_A Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, phophoserine phosphatase, protein structure initiative, structural genomics; 2.40A {Helicobacter pylori} Length = 217

 Score =  104 bits (263), Expect = 2e-28
 Identities = 37/104 (35%), Positives = 45/104 (43%), Gaps = 3/104 (2%)

Query: 86  VCFDVDSTVCVDEGIDELAEFCGAGKAVAEWTARAMGGSVPFEEALAARLSLFKP-SLSQ 144
             FD DST+   E I+ LA   G    V   T +AM G   F ++L  R+S  K   L  
Sbjct: 7   AVFDFDSTLVNAETIESLARAWGVFDEVKTITLKAMNGETDFHKSLILRVSKLKNMPLKL 66

Query: 145 VQDFLEKRPPRLSPGIDELVKKLKANNKNVYLISGGFRHMINIL 188
            ++  E  P  L  G  ELV  LK  N  V   SGGF    N  
Sbjct: 67  AKEVCESLP--LFEGALELVSALKEKNYKVVCFSGGFDLATNHY 108

>3p96_A Phosphoserine phosphatase SERB; ssgcid, structural genomics, structural genomics center for infectious disease, hydrolas; 2.05A {Mycobacterium avium} Length = 415

 Score = 86.4 bits (214), Expect = 3e-20
 Identities = 33/109 (30%), Positives = 51/109 (46%), Gaps = 3/109 (2%)

Query: 81  RTADAVCFDVDSTVCVDEGIDELAEFCGAGKAVAEWTARAMGGSVPFEEALAARLSLFK- 139
           R    + FDVDST+   E I+ LA   GA   VA  T  AM G + F ++L  R++    
Sbjct: 183 RAKRLIVFDVDSTLVQGEVIEMLAAKAGAEGQVAAITDAAMRGELDFAQSLQQRVATLAG 242

Query: 140 PSLSQVQDFLEKRPPRLSPGIDELVKKLKANNKNVYLISGGFRHMINIL 188
              + + +   +    L PG    ++ L+       ++SGGFR +I  L
Sbjct: 243 LPATVIDEVAGQ--LELMPGARTTLRTLRRLGYACGVVSGGFRRIIEPL 289

>1rku_A Homoserine kinase; phosphoserine phosphatase, phosphoserine:homoserine phosphotransferase, THRH, phosphoserine phosphoryl donor; 1.47A {Pseudomonas aeruginosa} SCOP: c.108.1.11 PDB: 1rkv_A Length = 206

 Score = 80.4 bits (199), Expect = 3e-19
 Identities = 20/113 (17%), Positives = 35/113 (30%), Gaps = 13/113 (11%)

Query: 86  VCFDVDSTVCVDEGIDELAEFCGAGKAVAEWTARAMGGSVPFEEALAARLSLFKP---SL 142
            C D++  + V E     AE  G                  ++  +  RL +       L
Sbjct: 5   ACLDLEGVL-VPEIWIAFAEKTGIDA-----LKATTRDIPDYDVLMKQRLRILDEHGLKL 58

Query: 143 SQVQDFLEKRPPRLSPGIDELVKKLKANNKNVYLISGGFRHMINIL-NILKWD 194
             +Q+ +         G  E V  L+   + V ++S  F      L   L + 
Sbjct: 59  GDIQEVIATLK--PLEGAVEFVDWLRERFQVV-ILSDTFYEFSQPLMRQLGFP 108

>3fvv_A Uncharacterized protein; unknown function, structural genomics, PSI,MCSG, protein STR initiative, midwest center for structural genomics; 2.10A {Bordetella pertussis} Length = 232

 Score = 61.2 bits (149), Expect = 6e-12
 Identities = 19/120 (15%), Positives = 39/120 (32%), Gaps = 16/120 (13%)

Query: 85  AVCFDVDSTVCVDEGIDELAEFC----------GAGKAVAEWTARAMGGSVPFEEALAAR 134
              FD+D T+   +   + A+F            A +   +   R   G +  E+A    
Sbjct: 6   LALFDLDHTLLPLDSDYQWADFLARTGRAGDPAEARRRNDDLMERYNRGELTAEQAAEFM 65

Query: 135 LSLFK-PSLSQVQD-----FLEKRPPRLSPGIDELVKKLKANNKNVYLISGGFRHMINIL 188
           L L    S  ++         +   P L+    ++V+   A      L++     +   +
Sbjct: 66  LGLLAAHSPVELAAWHEEFMRDVIRPSLTVQAVDVVRGHLAAGDLCALVTATNSFVTAPI 125

>2g09_A Cytosolic 5'-nucleotidase III; uniprot Q9D020, UMPH-1, pyrim nucleotidase 1, P5N-1, NT5C3 protein, AAH38029, BC038029, M LEAD poisoning; HET: PIN; 2.10A {Mus musculus} PDB: 2bdu_A* 2g08_A 2g06_A* 2g0a_A* 2q4t_A* 2g07_A* 2jga_A 2vkq_A 2cn1_A Length = 297

 Score = 43.1 bits (101), Expect = 2e-05
 Identities = 7/43 (16%), Positives = 20/43 (46%)

Query: 143 SQVQDFLEKRPPRLSPGIDELVKKLKANNKNVYLISGGFRHMI 185
           +++++ +      L  G +    KL+ +   V++ S G   ++
Sbjct: 129 AKLKEIVADSDVMLKEGYENFFGKLQQHGIPVFIFSAGIGDVL 171

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	203
1nnl_A	225	L-3-phosphoserine phosphatase; PSP, HPSP, phospho-	99.76
4eze_A	317	Haloacid dehalogenase-like hydrolase; magnesium bi	99.68
3p96_A	415	Phosphoserine phosphatase SERB; ssgcid, structural	99.67
3m1y_A	217	Phosphoserine phosphatase (SERB); NYSGXRC, PSI II,	99.66
3kbb_A	216	Phosphorylated carbohydrates phosphatase TM_1254;	99.65
1l7m_A	211	Phosphoserine phosphatase; rossmann fold, four-hel	99.61
3fvv_A	232	Uncharacterized protein; unknown function, structu	99.61
2fea_A	236	2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate	99.58
2ah5_A	210	COG0546: predicted phosphatases; MCSG, structural	99.54
2hsz_A	243	Novel predicted phosphatase; structural genomics,	99.53
2hi0_A	240	Putative phosphoglycolate phosphatase; YP_619066.1	99.53
3kd3_A	219	Phosphoserine phosphohydrolase-like protein; csgid	99.53
4ex6_A	237	ALNB; modified rossman fold, phosphatase, magnesiu	99.5
2pib_A	216	Phosphorylated carbohydrates phosphatase TM_1254;	99.49
2nyv_A	222	Pgpase, PGP, phosphoglycolate phosphatase; structu	99.48
4g9b_A	243	Beta-PGM, beta-phosphoglucomutase; HAD, putative p	99.48
3mc1_A	226	Predicted phosphatase, HAD family; PSI2, NYSGXRC,	99.47
4ap9_A	201	Phosphoserine phosphatase; hydrolase, haloacid deh	99.46
3cnh_A	200	Hydrolase family protein; NP_295428.1, predicted h	99.46
3n28_A	335	Phosphoserine phosphatase; HAD family hydrolase, s	99.45
3s6j_A	233	Hydrolase, haloacid dehalogenase-like family; stru	99.45
2zg6_A	220	Putative uncharacterized protein ST2620, probable	99.44
3e58_A	214	Putative beta-phosphoglucomutase; structu genomics	99.44
4eek_A	259	Beta-phosphoglucomutase-related protein; hydrolase	99.42
3kzx_A	231	HAD-superfamily hydrolase, subfamily IA, variant;	99.42
4gib_A	250	Beta-phosphoglucomutase; rossmann fold, HAD-like,	99.41
3l5k_A	250	Protein GS1, haloacid dehalogenase-like hydrolase	99.41
3qxg_A	243	Inorganic pyrophosphatase; hydrolase, magnesium bi	99.41
2i6x_A	211	Hydrolase, haloacid dehalogenase-like family; HAD	99.41
3ed5_A	238	YFNB; APC60080, bacillus subtilis subsp. subtilis	99.4
1rku_A	206	Homoserine kinase; phosphoserine phosphatase, phos	99.39
3dv9_A	247	Beta-phosphoglucomutase; structural genomics, APC6	99.39
3nas_A	233	Beta-PGM, beta-phosphoglucomutase; PSI, structural	99.39
2p11_A	231	Hypothetical protein; putative haloacid dehalogena	99.39
3sd7_A	240	Putative phosphatase; structural genomics, haloaci	99.38
2b0c_A	206	Putative phosphatase; alpha-D-glucose-1-phosphate,	99.38
1zrn_A	232	L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseud	99.38
2hdo_A	209	Phosphoglycolate phosphatase; NP_784602.1, structu	99.36
2hcf_A	234	Hydrolase, haloacid dehalogenase-like family; NP_6	99.36
2no4_A	240	(S)-2-haloacid dehalogenase IVA; HAD superfamily,	99.36
2hoq_A	241	Putative HAD-hydrolase PH1655; haloacid dehalogena	99.35
2fi1_A	190	Hydrolase, haloacid dehalogenase-like family; stru	99.35
3um9_A	230	Haloacid dehalogenase, type II; haloacid dehalogen	99.35
3qnm_A	240	Haloacid dehalogenase-like hydrolase; structural g	99.35
4dcc_A	229	Putative haloacid dehalogenase-like hydrolase; mag	99.35
3m9l_A	205	Hydrolase, haloacid dehalogenase-like family; HAD	99.35
2om6_A	235	Probable phosphoserine phosphatase; rossmann fold,	99.33
2gfh_A	260	Haloacid dehalogenase-like hydrolase domain conta;	99.33
3umb_A	233	Dehalogenase-like hydrolase; 2.20A {Ralstonia sola	99.32
2go7_A	207	Hydrolase, haloacid dehalogenase-like family; stru	99.31
3nuq_A	282	Protein SSM1, putative nucleotide phosphatase; sup	99.3
3k1z_A	263	Haloacid dehalogenase-like hydrolase domain-conta	99.3
3iru_A	277	Phoshonoacetaldehyde hydrolase like protein; phosp	99.3
1qq5_A	253	Protein (L-2-haloacid dehalogenase); hydrolase; 1.	99.29
1te2_A	226	Putative phosphatase; structural genomics, phospha	99.29
3d6j_A	225	Putative haloacid dehalogenase-like hydrolase; str	99.28
3ddh_A	234	Putative haloacid dehalogenase-like family hydrol;	99.28
2wf7_A	221	Beta-PGM, beta-phosphoglucomutase; transition stat	99.27
3smv_A	240	S-(-)-azetidine-2-carboxylate hydrolase; haloacid	99.26
1q92_A	197	5(3)-deoxyribonucleotidase; alpha-beta rossman fol	99.26
3bwv_A	180	Putative 5'(3')-deoxyribonucleotidase; NP_764060.1	99.25
3u26_A	234	PF00702 domain protein; structural genomics, PSI-b	99.24
2fdr_A	229	Conserved hypothetical protein; SAD, structural ge	99.21
2w43_A	201	Hypothetical 2-haloalkanoic acid dehalogenase; hyd	99.2
2i7d_A	193	5'(3')-deoxyribonucleotidase, cytosolic type; hydr	99.19
1yns_A	261	E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo	99.18
3umg_A	254	Haloacid dehalogenase; defluorinase, hydrolase; 2.	99.18
2pke_A	251	Haloacid delahogenase-like family hydrolase; NP_63	99.17
2qlt_A	275	(DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, sac	99.15
2g80_A	253	Protein UTR4; YEL038W, UTR4 protein (unknown trans	99.15
3skx_A	280	Copper-exporting P-type ATPase B; P1B-ATPase, ATP	99.12
3umc_A	254	Haloacid dehalogenase; HY; 2.15A {Pseudomonas aeru	99.12
1swv_A	267	Phosphonoacetaldehyde hydrolase; HAD enzyme superf	99.07
3i28_A	555	Epoxide hydrolase 2; aromatic hydrocarbons catabol	99.06
2i33_A	258	Acid phosphatase; HAD superfamily, hydrolase; 1.57	99.06
3a1c_A	287	Probable copper-exporting P-type ATPase A; ATP-bin	99.05
3vay_A	230	HAD-superfamily hydrolase; rossmann fold, haloacid	98.91
3ib6_A	189	Uncharacterized protein; structural genomics, unkn	98.9
2oda_A	196	Hypothetical protein pspto_2114; haloacid dehaloge	98.88
4as2_A	327	Phosphorylcholine phosphatase; hydrolase, HAD supe	98.83
2wm8_A	187	MDP-1, magnesium-dependent phosphatase 1; haloacid	98.8
3mn1_A	189	Probable YRBI family phosphatase; structural genom	98.77
3ij5_A	211	3-deoxy-D-manno-octulosonate 8-phosphate phosphat;	98.75
3l8h_A	179	Putative haloacid dehalogenase-like hydrolase; HAD	98.73
2b82_A	211	APHA, class B acid phosphatase; DDDD acid phosphat	98.72
1y8a_A	332	Hypothetical protein AF1437; structural genomics,	98.71
2gmw_A	211	D,D-heptose 1,7-bisphosphate phosphatase; Zn-bindi	98.69
2pr7_A	137	Haloacid dehalogenase/epoxide hydrolase family; NP	98.68
2p9j_A	162	Hypothetical protein AQ2171; secsg, riken, PSI, st	98.65
3mmz_A	176	Putative HAD family hydrolase; structural genomics	98.63
3ocu_A	262	Lipoprotein E; hydrolase, outer membrane; HET: NMN	98.62
3pct_A	260	Class C acid phosphatase; hydrolase, outer membran	98.59
2yj3_A	263	Copper-transporting ATPase; hydrolase, P-type ATPa	98.01
3n07_A	195	3-deoxy-D-manno-octulosonate 8-phosphate phosphat;	98.58
3e8m_A	164	Acylneuraminate cytidylyltransferase; 2-keto-3-deo	98.53
3zvl_A	416	Bifunctional polynucleotide phosphatase/kinase; hy	98.5
4fe3_A	297	Cytosolic 5'-nucleotidase 3; substrate complex, HA	98.48
1k1e_A	180	Deoxy-D-mannose-octulosonate 8-phosphate phosphat;	98.47
3qgm_A	268	P-nitrophenyl phosphatase (PHO2); structural genom	98.47
4gxt_A	385	A conserved functionally unknown protein; structur	98.4
3n1u_A	191	Hydrolase, HAD superfamily, subfamily III A; struc	98.39
3pdw_A	266	Uncharacterized hydrolase YUTF; structural genomic	98.31
2hx1_A	284	Predicted sugar phosphatases of the HAD superfamil	98.3
2r8e_A	188	3-deoxy-D-manno-octulosonate 8-phosphate phosphata	98.28
4dw8_A	279	Haloacid dehalogenase-like hydrolase; HAD, putativ	98.24
3mpo_A	279	Predicted hydrolase of the HAD superfamily; SGX, P	98.23
3epr_A	264	Hydrolase, haloacid dehalogenase-like family; stru	98.18
2oyc_A	306	PLP phosphatase, pyridoxal phosphate phosphatase;	98.17
2o2x_A	218	Hypothetical protein; structural genomics, joint c	98.17
3gyg_A	289	NTD biosynthesis operon putative hydrolase NTDB; P	98.11
3kc2_A	352	Uncharacterized protein YKR070W; HAD-like, mitocho	98.11
3fzq_A	274	Putative hydrolase; YP_001086940.1, putative haloa	98.08
3dao_A	283	Putative phosphatse; structural genomics, joint ce	98.07
3dnp_A	290	Stress response protein YHAX; structural PSI-2, pr	98.07
2obb_A	142	Hypothetical protein; structural genomics, PSI-2,	98.05
3pgv_A	285	Haloacid dehalogenase-like hydrolase; structural g	98.03
2c4n_A	250	Protein NAGD; nucleotide phosphatase, HAD superfam	97.99
1wr8_A	231	Phosphoglycolate phosphatase; alpha / beta core do	97.95
1nrw_A	288	Hypothetical protein, haloacid dehalogenase-like h	97.93
1xpj_A	126	Hypothetical protein; structural genomics, MCSG, p	97.89
2ho4_A	259	Haloacid dehalogenase-like hydrolase domain contai	97.86
3l7y_A	304	Putative uncharacterized protein SMU.1108C; hydrol	97.84
1rkq_A	282	Hypothetical protein YIDA; two domain structure wi	97.83
3f9r_A	246	Phosphomannomutase; trypanosome glycobiology struc	97.8
2pq0_A	258	Hypothetical conserved protein GK1056; hyopthetica	97.8
1xvi_A	275	MPGP, YEDP, putative mannosyl-3-phosphoglycerate p	97.78
3r4c_A	268	Hydrolase, haloacid dehalogenase-like hydrolase; h	97.78
2x4d_A	271	HLHPP, phospholysine phosphohistidine inorganic py	97.77
1vjr_A	271	4-nitrophenylphosphatase; TM1742, structural genom	97.72
1nf2_A	268	Phosphatase; structural proteomics, HAD NEW fold,	97.72
1yv9_A	264	Hydrolase, haloacid dehalogenase family; hypotheti	97.71
1l6r_A	227	Hypothetical protein TA0175; structural genomics,	97.64
1qyi_A	384	ZR25, hypothetical protein; structural genomics, P	97.6
1zjj_A	263	Hypothetical protein PH1952; alpha/beta hydrolase	97.6
2fpr_A	176	Histidine biosynthesis bifunctional protein HISB;	97.58
2b30_A	301	Pvivax hypothetical protein; SGPP, structural geno	97.5
1rlm_A	271	Phosphatase; HAD family, rossman fold, hydrolase;	97.44
2rbk_A	261	Putative uncharacterized protein; HAD-like phospha	97.44
3zx4_A	259	MPGP, mannosyl-3-phosphoglycerate phosphatase; hyd	97.37
2zos_A	249	MPGP, mannosyl-3-phosphoglycerate phosphatase; hal	97.35
2hhl_A	195	CTD small phosphatase-like protein; CTD phosphatas	97.13
1u02_A	239	Trehalose-6-phosphate phosphatase related protein;	97.11
2ght_A	181	Carboxy-terminal domain RNA polymerase II polypept	97.03
3nvb_A	387	Uncharacterized protein; protein FKBH, protein fkb	96.64
1ltq_A	301	Polynucleotide kinase; phosphatase, alpha/beta, P-	96.43
3ewi_A	168	N-acylneuraminate cytidylyltransferase; beta barre	95.41
2amy_A	246	PMM 2, phosphomannomutase 2; HS.459855, HS.313504,	94.96
4g63_A	470	Cytosolic IMP-GMP specific 5'-nucleotidase; struct	94.72
2jc9_A	555	Cytosolic purine 5'-nucleotidase; cytosolic 5-prim	94.5
2fue_A	262	PMM 1, PMMH-22, phosphomannomutase 1; enzyme-produ	94.33
3qle_A	204	TIM50P; chaperone, mitochondrion, preprotein trans	93.87
3j08_A	645	COPA, copper-exporting P-type ATPase A; copper tra	93.1
3ef0_A	372	RNA polymerase II subunit A C-terminal domain phos	92.0
1s2o_A	244	SPP, sucrose-phosphatase; phosphohydrolase, HAD su	91.94
3j09_A	723	COPA, copper-exporting P-type ATPase A; copper tra	91.34
3rfu_A	736	Copper efflux ATPase; alpha helical, CPC, CXXC, AT	90.08
3ar4_A	995	Sarcoplasmic/endoplasmic reticulum calcium ATPase;	89.42
3nvb_A	387	Uncharacterized protein; protein FKBH, protein fkb	89.33
1qyi_A	384	ZR25, hypothetical protein; structural genomics, P	89.27
2fpr_A	176	Histidine biosynthesis bifunctional protein HISB;	88.25
2zxe_A	1028	Na, K-ATPase alpha subunit; membrane protein, ION	86.9
3ef0_A	372	RNA polymerase II subunit A C-terminal domain phos	84.32
3ixz_A	1034	Potassium-transporting ATPase alpha; ION pump, H+,	83.7
1mhs_A	920	Proton pump, plasma membrane ATPase; ION transport	82.4
3ef1_A	442	RNA polymerase II subunit A C-terminal domain phos	81.47
3b8c_A	885	ATPase 2, plasma membrane-type; P-type ATPase, pro	81.27
2hhl_A	195	CTD small phosphatase-like protein; CTD phosphatas	80.43
3shq_A	320	UBLCP1; phosphatase, hydrolase; 1.96A {Drosophila	80.22

>1nnl_A L-3-phosphoserine phosphatase; PSP, HPSP, phospho-aspartyl, hydrolase; 1.53A {Homo sapiens} SCOP: c.108.1.4 PDB: 1l8l_A* 1l8o_A

Probab=99.76  E-value=5.6e-18  Score=136.90  Aligned_cols=120  Identities=53%  Similarity=0.899  Sum_probs=89.0

Q ss_pred             HHhhccCCcEEEEECCCcccccchHHHHHHHcCCCccHHHHHHHHhCCCCCHHHHHHHHHhccCCCHHHHHHHHHhCCCC
Q 028799           76 VLQLWRTADAVCFDVDSTVCVDEGIDELAEFCGAGKAVAEWTARAMGGSVPFEEALAARLSLFKPSLSQVQDFLEKRPPR  155 (203)
Q Consensus        76 ~~~~~~~~kaVIFD~DGTLiDse~~~~la~~~G~~~~~~~~~~~~~gG~~~~~e~l~~~~~~~~~~~e~l~~~~~~~~~~  155 (203)
                      ..+.+.++++|+|||||||+|++.+..+++.+|.+....+...++++|..++.+.+...+.......+.+.+++.....+
T Consensus         7 m~~~~~~~k~viFD~DGTLvd~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   86 (225)
T 1nnl_A            7 LRKLFYSADAVCFDVDSTVIREEGIDELAKICGVEDAVSEMTRRAMGGAVPFKAALTERLALIQPSREQVQRLIAEQPPH   86 (225)
T ss_dssp             HHHHHHHCSEEEEETBTTTBSSCHHHHHHHHTTCTTTC------------CHHHHHHHHHHHHCCCHHHHHHHHHHSCCC
T ss_pred             HHHHHhhCCEEEEeCcccccccccHHHHHHHhCCcHHHHHHHHHHHcCCccHHHHHHHHHHHhcCCHHHHHHHHHhccCC
Confidence            45567789999999999999999999999999876433445556666666777776655544433556666777654578


Q ss_pred             CCCcHHHHHHHHHHCCCeEEEEcCCCHHHHHHHH-HcCCCc
Q 028799          156 LSPGIDELVKKLKANNKNVYLISGGFRHMINILN-ILKWDV  195 (203)
Q Consensus       156 l~PG~~elL~~Lk~~G~~vaIVTn~~~~~i~~ll-~lGL~~  195 (203)
                      ++||+.++|+.|+++|++++|+||++...++.++ .+|+..
T Consensus        87 ~~~g~~~~l~~L~~~g~~~~i~T~~~~~~~~~~l~~~gl~~  127 (225)
T 1nnl_A           87 LTPGIRELVSRLQERNVQVFLISGGFRSIVEHVASKLNIPA  127 (225)
T ss_dssp             BCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCCG
T ss_pred             CCccHHHHHHHHHHCCCcEEEEeCChHHHHHHHHHHcCCCc
Confidence            9999999999999999999999999999999999 999973

>4eze_A Haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 2.27A {Salmonella enterica subsp}

Probab=99.68  E-value=2.6e-16  Score=136.84  Aligned_cols=120  Identities=25%  Similarity=0.416  Sum_probs=104.2

Q ss_pred             ccCCcEEEEECCCcccccchHHHHHHHcCCCccHHHHHHHHhCCCCCHHHHHHHHHhccCC-CHHHHHHHHHhCCCCCCC
Q 028799           80 WRTADAVCFDVDSTVCVDEGIDELAEFCGAGKAVAEWTARAMGGSVPFEEALAARLSLFKP-SLSQVQDFLEKRPPRLSP  158 (203)
Q Consensus        80 ~~~~kaVIFD~DGTLiDse~~~~la~~~G~~~~~~~~~~~~~gG~~~~~e~l~~~~~~~~~-~~e~l~~~~~~~~~~l~P  158 (203)
                      .+++++|+|||||||+|++.+..+++.+|......++...++.|..++.+.+.+++..+.+ ..+.+.++.+.  .+++|
T Consensus       105 ~~~~kaviFDlDGTLid~~~~~~la~~~g~~~~~~~~~~~~~~g~~~~~~~l~~~~~~l~~~~~~~i~~~~~~--~~l~p  182 (317)
T 4eze_A          105 LPANGIIAFDMDSTFIAEEGVDEIARELGMSTQITAITQQAMEGKLDFNASFTRRIGMLKGTPKAVLNAVCDR--MTLSP  182 (317)
T ss_dssp             CCCSCEEEECTBTTTBSSCHHHHHHHHTTCHHHHHHHHHHHHTTSSCHHHHHHHHHHTTTTCBHHHHHHHHHT--CCBCT
T ss_pred             CCCCCEEEEcCCCCccCCccHHHHHHHhCCcHHHHHHHHHHhcCCCCHHHHHHHHHHHhcCCCHHHHHHHHhC--CEECc
Confidence            4578999999999999999999999999987666778888899999999999888887765 45666666654  68999


Q ss_pred             cHHHHHHHHHHCCCeEEEEcCCCHHHHHHHH-HcCCCccceEEe
Q 028799          159 GIDELVKKLKANNKNVYLISGGFRHMINILN-ILKWDVLKVIQI  201 (203)
Q Consensus       159 G~~elL~~Lk~~G~~vaIVTn~~~~~i~~ll-~lGL~~~~~i~i  201 (203)
                      |+.++|+.|+++|++++|+||++...++.++ .+|++.++...+
T Consensus       183 g~~e~L~~Lk~~G~~v~IvSn~~~~~~~~~l~~lgl~~~f~~~l  226 (317)
T 4eze_A          183 GLLTILPVIKAKGFKTAIISGGLDIFTQRLKARYQLDYAFSNTV  226 (317)
T ss_dssp             THHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCSEEEEECE
T ss_pred             CHHHHHHHHHhCCCEEEEEeCccHHHHHHHHHHcCCCeEEEEEE
Confidence            9999999999999999999999999999999 999988776543

>3p96_A Phosphoserine phosphatase SERB; ssgcid, structural genomics, structural genomics center for infectious disease, hydrolas; 2.05A {Mycobacterium avium}

Probab=99.67  E-value=4.4e-16  Score=138.98  Aligned_cols=117  Identities=30%  Similarity=0.426  Sum_probs=103.3

Q ss_pred             ccCCcEEEEECCCcccccchHHHHHHHcCCCccHHHHHHHHhCCCCCHHHHHHHHHhccCC-CHHHHHHHHHhCCCCCCC
Q 028799           80 WRTADAVCFDVDSTVCVDEGIDELAEFCGAGKAVAEWTARAMGGSVPFEEALAARLSLFKP-SLSQVQDFLEKRPPRLSP  158 (203)
Q Consensus        80 ~~~~kaVIFD~DGTLiDse~~~~la~~~G~~~~~~~~~~~~~gG~~~~~e~l~~~~~~~~~-~~e~l~~~~~~~~~~l~P  158 (203)
                      .+++++++|||||||+|++.++.+++.+|.......++.+++.|.+++.+.+.+++..+.+ +.+.+.++.+.  .+++|
T Consensus       182 ~~~~k~viFD~DgTLi~~~~~~~la~~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~l~~~~~~~~~~~~~~--~~~~p  259 (415)
T 3p96_A          182 RRAKRLIVFDVDSTLVQGEVIEMLAAKAGAEGQVAAITDAAMRGELDFAQSLQQRVATLAGLPATVIDEVAGQ--LELMP  259 (415)
T ss_dssp             TTCCCEEEECTBTTTBSSCHHHHHHHHTTCHHHHHHHHHHHHTTCSCHHHHHHHHHHTTTTCBTHHHHHHHHH--CCBCT
T ss_pred             ccCCcEEEEcCcccCcCCchHHHHHHHcCCcHHHHHHHHHHhcCCcCHHHHHHHHHHHhcCCCHHHHHHHHHh--CccCc
Confidence            4678999999999999999999999999987777788888999999999999998887766 45566666655  58999


Q ss_pred             cHHHHHHHHHHCCCeEEEEcCCCHHHHHHHH-HcCCCccce
Q 028799          159 GIDELVKKLKANNKNVYLISGGFRHMINILN-ILKWDVLKV  198 (203)
Q Consensus       159 G~~elL~~Lk~~G~~vaIVTn~~~~~i~~ll-~lGL~~~~~  198 (203)
                      |+.++|+.|+++|++++|+||++...++.++ .+|++.++.
T Consensus       260 g~~e~l~~Lk~~G~~~~ivS~~~~~~~~~~~~~lgl~~~~~  300 (415)
T 3p96_A          260 GARTTLRTLRRLGYACGVVSGGFRRIIEPLAEELMLDYVAA  300 (415)
T ss_dssp             THHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCSEEEE
T ss_pred             cHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHcCccceee
Confidence            9999999999999999999999999999999 999987665

>3m1y_A Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, phophoserine phosphatase, protein structure initiative, structural genomics; 2.40A {Helicobacter pylori} SCOP: c.108.1.0

Probab=99.66  E-value=1.2e-16  Score=127.53  Aligned_cols=119  Identities=32%  Similarity=0.373  Sum_probs=93.8

Q ss_pred             cCCcEEEEECCCcccccchHHHHHHHcCCCccHHHHHHHHhCCCCCHHHHHHHHHhccCC-CHHHHHHHHHhCCCCCCCc
Q 028799           81 RTADAVCFDVDSTVCVDEGIDELAEFCGAGKAVAEWTARAMGGSVPFEEALAARLSLFKP-SLSQVQDFLEKRPPRLSPG  159 (203)
Q Consensus        81 ~~~kaVIFD~DGTLiDse~~~~la~~~G~~~~~~~~~~~~~gG~~~~~e~l~~~~~~~~~-~~e~l~~~~~~~~~~l~PG  159 (203)
                      .++++|+|||||||+|++.+..+++.+|.+........++..|..++.+.+...+..+.+ ..+.+.+++..  .+++||
T Consensus         2 ~~~k~vifDlDGTL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~   79 (217)
T 3m1y_A            2 SLQKLAVFDFDSTLVNAETIESLARAWGVFDEVKTITLKAMNGETDFHKSLILRVSKLKNMPLKLAKEVCES--LPLFEG   79 (217)
T ss_dssp             CCCEEEEEECBTTTBSSCHHHHHHHHTTCHHHHTTCCCC----CCCHHHHHHHHHHTTTTCBHHHHHHHHTT--CCBCBT
T ss_pred             CCCcEEEEeCCCCCCCchhHHHHHHHcCchHHHHHHHHHHHcCcCCHHHHHHHHHHHhcCCCHHHHHHHHhc--CcCCCC
Confidence            578999999999999999999888888875433333344455667788888777766655 56666666655  589999


Q ss_pred             HHHHHHHHHHCCCeEEEEcCCCHHHHHHHH-HcCCCccceEEe
Q 028799          160 IDELVKKLKANNKNVYLISGGFRHMINILN-ILKWDVLKVIQI  201 (203)
Q Consensus       160 ~~elL~~Lk~~G~~vaIVTn~~~~~i~~ll-~lGL~~~~~i~i  201 (203)
                      +.++|+.|+++|++++|+||++...++.++ .+|+..++...+
T Consensus        80 ~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~gl~~~f~~~~  122 (217)
T 3m1y_A           80 ALELVSALKEKNYKVVCFSGGFDLATNHYRDLLHLDAAFSNTL  122 (217)
T ss_dssp             HHHHHHHHHTTTEEEEEEEEEEHHHHHHHHHHHTCSEEEEEEE
T ss_pred             HHHHHHHHHHCCCEEEEEcCCchhHHHHHHHHcCcchhcccee
Confidence            999999999999999999999999999999 999998776654

>3kbb_A Phosphorylated carbohydrates phosphatase TM_1254; hydrolase, arbohydrate metabolism, COBA magnesium, manganese, metal-binding, nickel; HET: MSE GOL; 1.74A {Thermotoga maritima MSB8}

Probab=99.65  E-value=2.6e-15  Score=120.18  Aligned_cols=117  Identities=21%  Similarity=0.244  Sum_probs=84.4

Q ss_pred             CcEEEEECCCcccccch-----HHHHHHHcCCCccHHHHHHHHhCCCCCHHHHHHHHHhccC--CCHHHHH----HH---
Q 028799           83 ADAVCFDVDSTVCVDEG-----IDELAEFCGAGKAVAEWTARAMGGSVPFEEALAARLSLFK--PSLSQVQ----DF---  148 (203)
Q Consensus        83 ~kaVIFD~DGTLiDse~-----~~~la~~~G~~~~~~~~~~~~~gG~~~~~e~l~~~~~~~~--~~~e~l~----~~---  148 (203)
                      +|||+|||||||+|++.     +..+++.+|.+.. .+...+..+  .+..+.+........  ...+.+.    +.   
T Consensus         1 IkAViFD~DGTL~ds~~~~~~a~~~~~~~~g~~~~-~~~~~~~~g--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   77 (216)
T 3kbb_A            1 MEAVIFDMDGVLMDTEPLYFEAYRRVAESYGKPYT-EDLHRRIMG--VPEREGLPILMEALEIKDSLENFKKRVHEEKKR   77 (216)
T ss_dssp             CCEEEEESBTTTBCCGGGHHHHHHHHHHHTTCCCC-HHHHHHHTT--SCHHHHHHHHHHHTTCCSCHHHHHHHHHHHHHH
T ss_pred             CeEEEECCCCcccCCHHHHHHHHHHHHHHcCCCCC-HHHHHHHhc--cchhhhhhhhhhcccchhhHHHHHHHHHHHHHH
Confidence            58999999999999875     4556678888654 344555555  444554444333221  1222221    11   


Q ss_pred             -HHhCCCCCCCcHHHHHHHHHHCCCeEEEEcCCCHHHHHHHH-HcCCCccceEEecC
Q 028799          149 -LEKRPPRLSPGIDELVKKLKANNKNVYLISGGFRHMINILN-ILKWDVLKVIQITS  203 (203)
Q Consensus       149 -~~~~~~~l~PG~~elL~~Lk~~G~~vaIVTn~~~~~i~~ll-~lGL~~~~~i~it~  203 (203)
                       +.. ..+++||+.++++.|+++|++++|+||+++..+...+ .+|+..++...++|
T Consensus        78 ~~~~-~~~~~pg~~~~l~~L~~~g~~~~i~tn~~~~~~~~~l~~~~l~~~fd~~~~~  133 (216)
T 3kbb_A           78 VFSE-LLKENPGVREALEFVKSKRIKLALATSTPQREALERLRRLDLEKYFDVMVFG  133 (216)
T ss_dssp             HHHH-HCCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGCSEEECG
T ss_pred             HHHH-hcccCccHHHHHHHHHHcCCCcccccCCcHHHHHHHHHhcCCCccccccccc
Confidence             112 2579999999999999999999999999999999999 99999998888765

>1l7m_A Phosphoserine phosphatase; rossmann fold, four-helix bundle, B-hairpin, structural genomics, BSGC structure funded by NIH; 1.48A {Methanocaldococcus jannaschii} SCOP: c.108.1.4 PDB: 1f5s_A 1l7n_A 1l7p_A* 1l7o_A* 1j97_A*

Probab=99.61  E-value=8.7e-15  Score=115.40  Aligned_cols=116  Identities=32%  Similarity=0.483  Sum_probs=88.4

Q ss_pred             cCCcEEEEECCCcccccchHHHHHHHcCCCccHHHHHHHHhCCCCCHHHHHHHHHhccCC-CHHHHHHHHHhCCCCCCCc
Q 028799           81 RTADAVCFDVDSTVCVDEGIDELAEFCGAGKAVAEWTARAMGGSVPFEEALAARLSLFKP-SLSQVQDFLEKRPPRLSPG  159 (203)
Q Consensus        81 ~~~kaVIFD~DGTLiDse~~~~la~~~G~~~~~~~~~~~~~gG~~~~~e~l~~~~~~~~~-~~e~l~~~~~~~~~~l~PG  159 (203)
                      .++++|+|||||||+|++.+..+.+.+|.+......+.+...|..++.+.+........+ ..+...+.+.+  ..++||
T Consensus         3 ~~~k~i~fDlDGTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~l~~~   80 (211)
T 1l7m_A            3 KKKKLILFDFDSTLVNNETIDEIAREAGVEEEVKKITKEAMEGKLNFEQSLRKRVSLLKDLPIEKVEKAIKR--ITPTEG   80 (211)
T ss_dssp             CCCEEEEEECCCCCBSSCHHHHHHHHTTCHHHHHHHHHHHHTTSSCHHHHHHHHHHTTTTCBHHHHHHHHHT--CCBCTT
T ss_pred             cCCcEEEEeCCCCCCCccHHHHHHHHhCcHHHHHHHHHHHHcCCCCHHHHHHHHHHHhcCCCHHHHHHHHHh--CCCCcc
Confidence            468999999999999999988888888876444455666666666766665554443444 33445555544  468899


Q ss_pred             HHHHHHHHHHCCCeEEEEcCCCHHHHHHHH-HcCCCccce
Q 028799          160 IDELVKKLKANNKNVYLISGGFRHMINILN-ILKWDVLKV  198 (203)
Q Consensus       160 ~~elL~~Lk~~G~~vaIVTn~~~~~i~~ll-~lGL~~~~~  198 (203)
                      +.++|+.|+++|++++|+||++...++..+ .+|++.++.
T Consensus        81 ~~~~l~~l~~~g~~~~i~T~~~~~~~~~~~~~~~~~~~~~  120 (211)
T 1l7m_A           81 AEETIKELKNRGYVVAVVSGGFDIAVNKIKEKLGLDYAFA  120 (211)
T ss_dssp             HHHHHHHHHHTTEEEEEEEEEEHHHHHHHHHHHTCSEEEE
T ss_pred             HHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHcCCCeEEE
Confidence            999999999999999999999999888888 999876543

>3fvv_A Uncharacterized protein; unknown function, structural genomics, PSI,MCSG, protein STR initiative, midwest center for structural genomics; 2.10A {Bordetella pertussis}

Probab=99.61  E-value=2.3e-15  Score=121.75  Aligned_cols=119  Identities=18%  Similarity=0.175  Sum_probs=82.7

Q ss_pred             cCCcEEEEECCCcccccchHHHHHH---HcCCC-c------cHHHHHHHHhCCCCCHHHHHHHHHhccCC-CHHHHH---
Q 028799           81 RTADAVCFDVDSTVCVDEGIDELAE---FCGAG-K------AVAEWTARAMGGSVPFEEALAARLSLFKP-SLSQVQ---  146 (203)
Q Consensus        81 ~~~kaVIFD~DGTLiDse~~~~la~---~~G~~-~------~~~~~~~~~~gG~~~~~e~l~~~~~~~~~-~~e~l~---  146 (203)
                      .++++|+|||||||+|++....+..   ..|.. .      ........+..|.++..+........+.+ +.+++.   
T Consensus         2 ~~~k~viFDlDGTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (232)
T 3fvv_A            2 TTRRLALFDLDHTLLPLDSDYQWADFLARTGRAGDPAEARRRNDDLMERYNRGELTAEQAAEFMLGLLAAHSPVELAAWH   81 (232)
T ss_dssp             CCCEEEEECCBTTTBSSCHHHHHHHHHHHTTSSSSHHHHHHHHHHHHHHHHHTCSCHHHHHHHHHHHHHTSCHHHHHHHH
T ss_pred             CCCcEEEEeCCCCCcCCchHHHHHHHHHHcCCCCccHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHhcCCCHHHHHHHH
Confidence            3568999999999999987543332   33432 1      11234445556677777766555443333 444443   


Q ss_pred             -HHHHhC-CCCCCCcHHHHHHHHHHCCCeEEEEcCCCHHHHHHHH-HcCCCccceE
Q 028799          147 -DFLEKR-PPRLSPGIDELVKKLKANNKNVYLISGGFRHMINILN-ILKWDVLKVI  199 (203)
Q Consensus       147 -~~~~~~-~~~l~PG~~elL~~Lk~~G~~vaIVTn~~~~~i~~ll-~lGL~~~~~i  199 (203)
                       +++++. ...++||+.++|+.|+++|++++|+||++...++.++ .+|++.++..
T Consensus        82 ~~~~~~~~~~~~~~g~~~~l~~l~~~g~~~~ivS~~~~~~~~~~~~~~g~~~~~~~  137 (232)
T 3fvv_A           82 EEFMRDVIRPSLTVQAVDVVRGHLAAGDLCALVTATNSFVTAPIARAFGVQHLIAT  137 (232)
T ss_dssp             HHHHHHTTGGGCCHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCCEEEEC
T ss_pred             HHHHHHhhhhhcCHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCCEEEEc
Confidence             344432 1257999999999999999999999999999999999 9999865543

>2fea_A 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; 2633731, structural genomics, joint center for structural GE JCSG; HET: MSE; 2.00A {Bacillus subtilis} SCOP: c.108.1.20

Probab=99.58  E-value=8.3e-15  Score=120.10  Aligned_cols=112  Identities=14%  Similarity=0.252  Sum_probs=85.9

Q ss_pred             CCcEEEEECCCcccccchHHHHHHHcCCCccHHHHHHHHhCCCCCHHHHHHHHHhccCC-CHHHHHHHHHhCCCCCCCcH
Q 028799           82 TADAVCFDVDSTVCVDEGIDELAEFCGAGKAVAEWTARAMGGSVPFEEALAARLSLFKP-SLSQVQDFLEKRPPRLSPGI  160 (203)
Q Consensus        82 ~~kaVIFD~DGTLiDse~~~~la~~~G~~~~~~~~~~~~~gG~~~~~e~l~~~~~~~~~-~~e~l~~~~~~~~~~l~PG~  160 (203)
                      ++++|+|||||||+|++++..+.+.++. .....+...+..|..++.+.+...+..+.. ..+++.+++.. ..+++||+
T Consensus         5 ~~k~viFD~DGTL~d~ds~~~~~~~~~~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~pg~   82 (236)
T 2fea_A            5 RKPFIICDFDGTITMNDNIINIMKTFAP-PEWMALKDGVLSKTLSIKEGVGRMFGLLPSSLKEEITSFVLE-DAKIREGF   82 (236)
T ss_dssp             CCEEEEECCTTTTBSSCHHHHHHHHHSC-THHHHHHHHHHTTSSCHHHHHHHHHTTSBGGGHHHHHHHHHH-HCCBCTTH
T ss_pred             CCcEEEEeCCCCCCccchHHHHHHHhch-hhHHHHHHHHHhCcCcHHHHHHHHHHhcCCChHHHHHHHHhc-CCCCCccH
Confidence            5689999999999998888888777764 233445555777777888887776655433 25566665433 36899999


Q ss_pred             HHHHHHHHHCCCeEEEEcCCCHHHHHHHHHcCCCcc
Q 028799          161 DELVKKLKANNKNVYLISGGFRHMINILNILKWDVL  196 (203)
Q Consensus       161 ~elL~~Lk~~G~~vaIVTn~~~~~i~~ll~lGL~~~  196 (203)
                      .++|+.|+++|++++|+||++...++.++. |+..+
T Consensus        83 ~~~l~~L~~~g~~~~ivS~~~~~~~~~~l~-~l~~~  117 (236)
T 2fea_A           83 REFVAFINEHEIPFYVISGGMDFFVYPLLE-GIVEK  117 (236)
T ss_dssp             HHHHHHHHHHTCCEEEEEEEEHHHHHHHHT-TTSCG
T ss_pred             HHHHHHHHhCCCeEEEEeCCcHHHHHHHHh-cCCCC
Confidence            999999999999999999999998888876 66444

>2ah5_A COG0546: predicted phosphatases; MCSG, structural genomics, hydrola haloacid dehalogenase-like, PSI; 1.74A {Streptococcus pneumoniae} SCOP: c.108.1.6

Probab=99.54  E-value=1.1e-14  Score=116.98  Aligned_cols=115  Identities=17%  Similarity=0.201  Sum_probs=79.1

Q ss_pred             CCcEEEEECCCcccccch-----HHHHHHHcCCCccHHHHHHHHhCCCCCHHHHHHHHHhccCC-CHHH----HHHHHHh
Q 028799           82 TADAVCFDVDSTVCVDEG-----IDELAEFCGAGKAVAEWTARAMGGSVPFEEALAARLSLFKP-SLSQ----VQDFLEK  151 (203)
Q Consensus        82 ~~kaVIFD~DGTLiDse~-----~~~la~~~G~~~~~~~~~~~~~gG~~~~~e~l~~~~~~~~~-~~e~----l~~~~~~  151 (203)
                      ++++|+|||||||+|++.     +....+.+|......+....+.+  .+..+.+...   +.. ..++    +.+.+..
T Consensus         3 ~~k~viFDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g--~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~   77 (210)
T 2ah5_A            3 SITAIFFDLDGTLVDSSIGIHNAFTYTFKELGVPSPDAKTIRGFMG--PPLESSFATC---LSKDQISEAVQIYRSYYKA   77 (210)
T ss_dssp             TCCEEEECSBTTTEECHHHHHHHHHHHHHHHTCCCCCHHHHHHTSS--SCHHHHHHTT---SCGGGHHHHHHHHHHHHHH
T ss_pred             CCCEEEEcCCCcCccCHHHHHHHHHHHHHHcCCCCCCHHHHHHHcC--ccHHHHHHHH---cCHHHHHHHHHHHHHHHHH
Confidence            479999999999999975     34455677875432333444444  3444443322   111 1222    2222322


Q ss_pred             C---CCCCCCcHHHHHHHHHHCCCeEEEEcCCCHHHHHHHH-HcCCCccceEEec
Q 028799          152 R---PPRLSPGIDELVKKLKANNKNVYLISGGFRHMINILN-ILKWDVLKVIQIT  202 (203)
Q Consensus       152 ~---~~~l~PG~~elL~~Lk~~G~~vaIVTn~~~~~i~~ll-~lGL~~~~~i~it  202 (203)
                      .   ...++||+.++|+.|++ |++++|+||+++..++..+ ++|+..++..+++
T Consensus        78 ~~~~~~~~~~g~~~~l~~L~~-~~~l~i~T~~~~~~~~~~l~~~gl~~~f~~i~~  131 (210)
T 2ah5_A           78 KGIYEAQLFPQIIDLLEELSS-SYPLYITTTKDTSTAQDMAKNLEIHHFFDGIYG  131 (210)
T ss_dssp             TGGGSCEECTTHHHHHHHHHT-TSCEEEEEEEEHHHHHHHHHHTTCGGGCSEEEE
T ss_pred             hccCCCCCCCCHHHHHHHHHc-CCeEEEEeCCCHHHHHHHHHhcCchhheeeeec
Confidence            1   35789999999999999 9999999999999999989 9999988776665

>2hsz_A Novel predicted phosphatase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: UNL; 1.90A {Haemophilus somnus 129PT} SCOP: c.108.1.6

Probab=99.53  E-value=1.3e-13  Score=113.17  Aligned_cols=132  Identities=14%  Similarity=0.092  Sum_probs=83.4

Q ss_pred             CCCChHHHHhhccCCcEEEEECCCcccccch-----HHHHHHHcCCCccHHHHHHHHhCCCCCHHHHHHHHHhc-----c
Q 028799           69 NTLPSKEVLQLWRTADAVCFDVDSTVCVDEG-----IDELAEFCGAGKAVAEWTARAMGGSVPFEEALAARLSL-----F  138 (203)
Q Consensus        69 ~~~~~~~~~~~~~~~kaVIFD~DGTLiDse~-----~~~la~~~G~~~~~~~~~~~~~gG~~~~~e~l~~~~~~-----~  138 (203)
                      +..+++ ......++++|+|||||||+|++.     +..+++.+|......+....+.+  ....+.+...+..     .
T Consensus        10 ~~~~~~-~~~~~~~~k~iiFDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g--~~~~~~~~~~~~~~~~~~~   86 (243)
T 2hsz_A           10 HHHENL-YFQGMTQFKLIGFDLDGTLVNSLPDLALSINSALKDVNLPQASENLVMTWIG--NGADVLSQRAVDWACKQAE   86 (243)
T ss_dssp             ----------CCSSCSEEEECSBTTTEECHHHHHHHHHHHHHHTTCCCCCHHHHHHHCS--SCHHHHHHHHHHHHHHHHT
T ss_pred             cccccc-eecCCccCCEEEEcCCCcCCCCHHHHHHHHHHHHHHcCCCCCCHHHHHHHhC--chHHHHHHHHhhhhhcccc
Confidence            344443 367788899999999999999974     34555677875332333444454  3333333322211     0


Q ss_pred             CC-CHHH-------HHHHHHh---CCCCCCCcHHHHHHHHHHCCCeEEEEcCCCHHHHHHHH-HcCCCccceEEecC
Q 028799          139 KP-SLSQ-------VQDFLEK---RPPRLSPGIDELVKKLKANNKNVYLISGGFRHMINILN-ILKWDVLKVIQITS  203 (203)
Q Consensus       139 ~~-~~e~-------l~~~~~~---~~~~l~PG~~elL~~Lk~~G~~vaIVTn~~~~~i~~ll-~lGL~~~~~i~it~  203 (203)
                      .. +.+.       +.+.+..   ....++||+.++|+.|+++|++++|+||++...++.++ .+|+..++...+++
T Consensus        87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~gl~~~f~~~~~~  163 (243)
T 2hsz_A           87 KELTEDEFKYFKRQFGFYYGENLCNISRLYPNVKETLEALKAQGYILAVVTNKPTKHVQPILTAFGIDHLFSEMLGG  163 (243)
T ss_dssp             CCCCHHHHHHHHHHHHHHHHHHTTSSCEECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGCSEEECT
T ss_pred             ccCCHHHHHHHHHHHHHHHHHhccccCccCCCHHHHHHHHHHCCCEEEEEECCcHHHHHHHHHHcCchheEEEEEec
Confidence            11 2222       2222221   23678999999999999999999999999999999999 99998877766653

>2hi0_A Putative phosphoglycolate phosphatase; YP_619066.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.51A {Lactobacillus delbrueckii}

Probab=99.53  E-value=7.3e-14  Score=114.19  Aligned_cols=118  Identities=17%  Similarity=0.150  Sum_probs=79.0

Q ss_pred             CCcEEEEECCCcccccch-----HHHHHHHcCCC-ccHHHHHHHHhCCCCCHHHHHHHHHh-------------------
Q 028799           82 TADAVCFDVDSTVCVDEG-----IDELAEFCGAG-KAVAEWTARAMGGSVPFEEALAARLS-------------------  136 (203)
Q Consensus        82 ~~kaVIFD~DGTLiDse~-----~~~la~~~G~~-~~~~~~~~~~~gG~~~~~e~l~~~~~-------------------  136 (203)
                      ++++|+|||||||+|++.     +..+.+.+|.. ....+......+  .+..+.+.....                   
T Consensus         3 ~~k~viFDlDGTL~ds~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~g--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (240)
T 2hi0_A            3 KYKAAIFDMDGTILDTSADLTSALNYAFEQTGHRHDFTVEDIKNFFG--SGVVVAVTRALAYEAGSSRESLVAFGTKDEQ   80 (240)
T ss_dssp             SCSEEEECSBTTTEECHHHHHHHHHHHHHHTTSCCCCCHHHHHHHCS--SCHHHHHHHHHHHHTTCCHHHHTTTTSTTCC
T ss_pred             cccEEEEecCCCCccCHHHHHHHHHHHHHHcCCCCCCCHHHHHHhcC--ccHHHHHHHHHHhcccccccccccccccccc
Confidence            579999999999999975     34556677875 222333445555  343333333220                   


Q ss_pred             -ccCCCHHH-------HHHHHHh---CCCCCCCcHHHHHHHHHHCCCeEEEEcCCCHHHHHHHH-HcCCCccceEEec
Q 028799          137 -LFKPSLSQ-------VQDFLEK---RPPRLSPGIDELVKKLKANNKNVYLISGGFRHMINILN-ILKWDVLKVIQIT  202 (203)
Q Consensus       137 -~~~~~~e~-------l~~~~~~---~~~~l~PG~~elL~~Lk~~G~~vaIVTn~~~~~i~~ll-~lGL~~~~~i~it  202 (203)
                       ....+.+.       +.+++..   ....++||+.++|+.|+++|++++|+||+++..++.++ .+|+. ++..+++
T Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~-~f~~~~~  157 (240)
T 2hi0_A           81 IPEAVTQTEVNRVLEVFKPYYADHCQIKTGPFPGILDLMKNLRQKGVKLAVVSNKPNEAVQVLVEELFPG-SFDFALG  157 (240)
T ss_dssp             CCTTCCHHHHHHHHHHHHHHHHHTSSSSCEECTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHSTT-TCSEEEE
T ss_pred             cCCCCCHHHHHHHHHHHHHHHHHhhhhcCCcCCCHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCc-ceeEEEe
Confidence             00012222       2233332   23578999999999999999999999999999999988 99988 6666554

>3kd3_A Phosphoserine phosphohydrolase-like protein; csgid, niaid, S genomics, national institute of allergy and infectious DISE (niaid); 1.70A {Francisella tularensis subsp}

Probab=99.53  E-value=5.4e-14  Score=110.98  Aligned_cols=114  Identities=28%  Similarity=0.459  Sum_probs=84.9

Q ss_pred             CCcEEEEECCCcccccchHHHHHHHcCCC-----ccHHHHHHHHhCCCCCHHHHHHHHHhccCCCHHHHHHHHHh-CCCC
Q 028799           82 TADAVCFDVDSTVCVDEGIDELAEFCGAG-----KAVAEWTARAMGGSVPFEEALAARLSLFKPSLSQVQDFLEK-RPPR  155 (203)
Q Consensus        82 ~~kaVIFD~DGTLiDse~~~~la~~~G~~-----~~~~~~~~~~~gG~~~~~e~l~~~~~~~~~~~e~l~~~~~~-~~~~  155 (203)
                      |+++|+|||||||+|++........+-..     ........+...+...+.+.+..++.......+.+.++++. ....
T Consensus         3 mik~i~fDlDGTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (219)
T 3kd3_A            3 AMKNIIFDFDSTLIKKESLELILEPILQKSPAKLKEIEYITNLGMQGDISFRDSLQKRLAIASPTKQSIKEFSNKYCPNL   82 (219)
T ss_dssp             -CEEEEECCCCCCBSSCHHHHHHTTTTTTCHHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHCCCBHHHHHHHHHHHTTTT
T ss_pred             cceEEEEeCCCCCcCcccHHHHHHHHHhcccchHHHHHHHHHHHhcCcccHHHHHHHHHhhccCCHHHHHHHHHhhcccc
Confidence            57999999999999998766654433111     12233455566677788887777766554455666666653 2356


Q ss_pred             CCCcHHHHHHHHHHCCCeEEEEcCCCHHHHHHHH-HcCCCc
Q 028799          156 LSPGIDELVKKLKANNKNVYLISGGFRHMINILN-ILKWDV  195 (203)
Q Consensus       156 l~PG~~elL~~Lk~~G~~vaIVTn~~~~~i~~ll-~lGL~~  195 (203)
                      ++||+.++++.|+++|++++|+||++...++.++ .+|+..
T Consensus        83 ~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~~~~~~~~~  123 (219)
T 3kd3_A           83 LTDGIKELVQDLKNKGFEIWIFSGGLSESIQPFADYLNIPR  123 (219)
T ss_dssp             BCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCCG
T ss_pred             CChhHHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHcCCCc
Confidence            9999999999999999999999999999999999 999953

>4ex6_A ALNB; modified rossman fold, phosphatase, magnesium binding, hydro; 1.25A {Streptomyces SP} PDB: 4ex7_A

Probab=99.50  E-value=1.9e-13  Score=110.15  Aligned_cols=124  Identities=15%  Similarity=0.164  Sum_probs=84.0

Q ss_pred             HhhccCCcEEEEECCCcccccch-----HHHHHHHcCCCccHHHHHHHHhCCCCCHHHHHHHHHhccCCC--HHH----H
Q 028799           77 LQLWRTADAVCFDVDSTVCVDEG-----IDELAEFCGAGKAVAEWTARAMGGSVPFEEALAARLSLFKPS--LSQ----V  145 (203)
Q Consensus        77 ~~~~~~~kaVIFD~DGTLiDse~-----~~~la~~~G~~~~~~~~~~~~~gG~~~~~e~l~~~~~~~~~~--~e~----l  145 (203)
                      ...+.++++|+|||||||+|++.     +..+.+.+|.... .+......+  .+..+.+...+......  .+.    +
T Consensus        13 ~~~~~~ik~i~fDlDGTL~d~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~g--~~~~~~~~~~~~~~~~~~~~~~~~~~~   89 (237)
T 4ex6_A           13 GAPAAADRGVILDLDGTLADTPAAIATITAEVLAAMGTAVS-RGAILSTVG--RPLPASLAGLLGVPVEDPRVAEATEEY   89 (237)
T ss_dssp             ----CCCEEEEECSBTTTBCCHHHHHHHHHHHHHHTTCCCC-HHHHHHHTT--SCHHHHHHHHHTSCTTSHHHHHHHHHH
T ss_pred             CCCcccCCEEEEcCCCCCcCCHHHHHHHHHHHHHHcCCCCC-HHHHHHhcC--ccHHHHHHHHhCCCCCHHHHHHHHHHH
Confidence            45578899999999999999864     4456667774333 334444555  45555555544332111  111    1


Q ss_pred             HHHHHh-----CCCCCCCcHHHHHHHHHHCCCeEEEEcCCCHHHHHHHH-HcCCCccceEEecC
Q 028799          146 QDFLEK-----RPPRLSPGIDELVKKLKANNKNVYLISGGFRHMINILN-ILKWDVLKVIQITS  203 (203)
Q Consensus       146 ~~~~~~-----~~~~l~PG~~elL~~Lk~~G~~vaIVTn~~~~~i~~ll-~lGL~~~~~i~it~  203 (203)
                      .+.+.+     ....++||+.++|+.|+++|++++|+||+....++.++ .+|+..++...+++
T Consensus        90 ~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~  153 (237)
T 4ex6_A           90 GRRFGAHVRAAGPRLLYPGVLEGLDRLSAAGFRLAMATSKVEKAARAIAELTGLDTRLTVIAGD  153 (237)
T ss_dssp             HHHHHHHHHHHGGGGBCTTHHHHHHHHHHTTEEEEEECSSCHHHHHHHHHHHTGGGTCSEEECT
T ss_pred             HHHHHHhcccccCCccCCCHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCchhheeeEEeC
Confidence            122211     23579999999999999999999999999999999999 99998887777654

>2nyv_A Pgpase, PGP, phosphoglycolate phosphatase; structural genomics, PSI-2, protein structure initiative; 2.10A {Aquifex aeolicus} PDB: 2yy6_A

Probab=99.48  E-value=8.9e-14  Score=112.59  Aligned_cols=120  Identities=13%  Similarity=0.118  Sum_probs=81.9

Q ss_pred             CCcEEEEECCCcccccch-----HHHHHHHcCCCccHHHHHHHHhCCCCCHHHHHHHHHhccCCC--HHHHHHHHHh---
Q 028799           82 TADAVCFDVDSTVCVDEG-----IDELAEFCGAGKAVAEWTARAMGGSVPFEEALAARLSLFKPS--LSQVQDFLEK---  151 (203)
Q Consensus        82 ~~kaVIFD~DGTLiDse~-----~~~la~~~G~~~~~~~~~~~~~gG~~~~~e~l~~~~~~~~~~--~e~l~~~~~~---  151 (203)
                      ++++|+|||||||+|++.     +..+++.+|......+......+  .+..+.+...+......  .+.+.+++..   
T Consensus         2 ~~k~viFDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (222)
T 2nyv_A            2 SLRVILFDLDGTLIDSAKDIALALEKTLKELGLEEYYPDNVTKYIG--GGVRALLEKVLKDKFREEYVEVFRKHYLENPV   79 (222)
T ss_dssp             EECEEEECTBTTTEECHHHHHHHHHHHHHHTTCGGGCCSCGGGGCS--SCHHHHHHHHHGGGCCTHHHHHHHHHHHHCSC
T ss_pred             CCCEEEECCCCcCCCCHHHHHHHHHHHHHHcCCCCCCHHHHHHHhC--cCHHHHHHHHhChHHHHHHHHHHHHHHHHhcc
Confidence            478999999999999975     34555677765211111222333  45555555443311111  2334444442   


Q ss_pred             CCCCCCCcHHHHHHHHHHCCCeEEEEcCCCHHHHHHHH-HcCCCccceEEecC
Q 028799          152 RPPRLSPGIDELVKKLKANNKNVYLISGGFRHMINILN-ILKWDVLKVIQITS  203 (203)
Q Consensus       152 ~~~~l~PG~~elL~~Lk~~G~~vaIVTn~~~~~i~~ll-~lGL~~~~~i~it~  203 (203)
                      ...+++||+.++|+.|+++|++++|+||++...++.++ .+|+..++..++++
T Consensus        80 ~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~gl~~~f~~i~~~  132 (222)
T 2nyv_A           80 VYTKPYPEIPYTLEALKSKGFKLAVVSNKLEELSKKILDILNLSGYFDLIVGG  132 (222)
T ss_dssp             SSCEECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGCSEEECT
T ss_pred             ccCccCCCHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCHHHheEEEec
Confidence            24679999999999999999999999999999999999 99998877766653

>4g9b_A Beta-PGM, beta-phosphoglucomutase; HAD, putative phosphoglucomutase, enzyme function initiative structural genomics, isomerase; 1.70A {Escherichia coli}

Probab=99.48  E-value=1.5e-13  Score=113.41  Aligned_cols=119  Identities=18%  Similarity=0.184  Sum_probs=78.3

Q ss_pred             ccCCcEEEEECCCcccccch-----HHHHHHHcCCCccHHHHHHHHhCCCCCHHHHHHHHHhccC---C-CHHHHH----
Q 028799           80 WRTADAVCFDVDSTVCVDEG-----IDELAEFCGAGKAVAEWTARAMGGSVPFEEALAARLSLFK---P-SLSQVQ----  146 (203)
Q Consensus        80 ~~~~kaVIFD~DGTLiDse~-----~~~la~~~G~~~~~~~~~~~~~gG~~~~~e~l~~~~~~~~---~-~~e~l~----  146 (203)
                      .+++|+|||||||||+||+.     +..+++.+|++... +......|  .+..+.+...+....   . ...+..    
T Consensus         2 ~MkiKaViFDlDGTL~Ds~~~~~~a~~~~~~~~g~~~~~-~~~~~~~g--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (243)
T 4g9b_A            2 VMKLQGVIFDLDGVITDTAHLHFQAWQQIAAEIGISIDA-QFNESLKG--ISRDESLRRILQHGGKEGDFNSQERAQLAY   78 (243)
T ss_dssp             CCCCCEEEECSBTTTBCCHHHHHHHHHHHHHHTTCCCCT-TGGGGGTT--CCHHHHHHHHHHHTTCGGGCCHHHHHHHHH
T ss_pred             CccCcEEEEcCCCcccCCHHHHHHHHHHHHHHcCCCCCH-HHHHHHcC--CCHHHHHHHHHHHhhcccchhHHHHHHHHH
Confidence            35689999999999999975     44566778876332 22233333  445555444333221   1 111111    


Q ss_pred             -------HHHHh-CCCCCCCcHHHHHHHHHHCCCeEEEEcCCCHHHHHHHH-HcCCCccceEEecC
Q 028799          147 -------DFLEK-RPPRLSPGIDELVKKLKANNKNVYLISGGFRHMINILN-ILKWDVLKVIQITS  203 (203)
Q Consensus       147 -------~~~~~-~~~~l~PG~~elL~~Lk~~G~~vaIVTn~~~~~i~~ll-~lGL~~~~~i~it~  203 (203)
                             +.+.. ....++||+.++++.|+++|++++++||+..  ...++ .+|+..++..+++|
T Consensus        79 ~~~~~~~~~~~~~~~~~~~pg~~~ll~~L~~~g~~i~i~t~~~~--~~~~l~~~gl~~~fd~i~~~  142 (243)
T 4g9b_A           79 RKNLLYVHSLRELTVNAVLPGIRSLLADLRAQQISVGLASVSLN--APTILAALELREFFTFCADA  142 (243)
T ss_dssp             HHHHHHHHHHHTCCGGGBCTTHHHHHHHHHHTTCEEEECCCCTT--HHHHHHHTTCGGGCSEECCG
T ss_pred             HHHHHHHHHHHhcccccccccHHHHHHhhhcccccceecccccc--hhhhhhhhhhcccccccccc
Confidence                   11122 1246899999999999999999999999875  45677 99999988887764

>3mc1_A Predicted phosphatase, HAD family; PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.93A {Clostridium acetobutylicum} SCOP: c.108.1.0

Probab=99.47  E-value=6.5e-14  Score=111.93  Aligned_cols=117  Identities=12%  Similarity=0.122  Sum_probs=80.3

Q ss_pred             cCCcEEEEECCCcccccch-----HHHHHHHcCCCccHHHHHHHHhCCCCCHHHHHHHHHhccCCCHHH-------HHHH
Q 028799           81 RTADAVCFDVDSTVCVDEG-----IDELAEFCGAGKAVAEWTARAMGGSVPFEEALAARLSLFKPSLSQ-------VQDF  148 (203)
Q Consensus        81 ~~~kaVIFD~DGTLiDse~-----~~~la~~~G~~~~~~~~~~~~~gG~~~~~e~l~~~~~~~~~~~e~-------l~~~  148 (203)
                      .++++|+|||||||+|++.     +....+.+|......+......+  .+..+.+...++.   +.+.       +.+.
T Consensus         2 ~m~k~i~fDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g--~~~~~~~~~~~~~---~~~~~~~~~~~~~~~   76 (226)
T 3mc1_A            2 SLYNYVLFDLDGTLTDSAEGITKSVKYSLNKFDIQVEDLSSLNKFVG--PPLKTSFMEYYNF---DEETATVAIDYYRDY   76 (226)
T ss_dssp             CCCCEEEECSBTTTBCCHHHHHHHHHHHHHTTTCCCSCGGGGGGGSS--SCHHHHHHHHHCC---CHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCccccCHHHHHHHHHHHHHHcCCCCCCHHHHHHHhC--cCHHHHHHHHhCC---CHHHHHHHHHHHHHH
Confidence            4689999999999999875     33445566765322222333343  3455555444321   2211       2222


Q ss_pred             HHh---CCCCCCCcHHHHHHHHHHCCCeEEEEcCCCHHHHHHHH-HcCCCccceEEec
Q 028799          149 LEK---RPPRLSPGIDELVKKLKANNKNVYLISGGFRHMINILN-ILKWDVLKVIQIT  202 (203)
Q Consensus       149 ~~~---~~~~l~PG~~elL~~Lk~~G~~vaIVTn~~~~~i~~ll-~lGL~~~~~i~it  202 (203)
                      +.+   ....++||+.++|+.|+++|++++|+||+....++.++ .+|+..++...++
T Consensus        77 ~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f~~~~~  134 (226)
T 3mc1_A           77 FKAKGMFENKVYDGIEALLSSLKDYGFHLVVATSKPTVFSKQILEHFKLAFYFDAIVG  134 (226)
T ss_dssp             HTTTGGGSCCBCTTHHHHHHHHHHHTCEEEEEEEEEHHHHHHHHHHTTCGGGCSEEEE
T ss_pred             HHHhCcccCccCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhCCHhheeeeec
Confidence            222   13689999999999999999999999999999999999 9999887776654

>4ap9_A Phosphoserine phosphatase; hydrolase, haloacid dehalogenase superfamily, NDSB; HET: 1PS; 1.78A {Thermococcus onnurineus} PDB: 4b6j_A

Probab=99.46  E-value=6.3e-14  Score=109.61  Aligned_cols=111  Identities=25%  Similarity=0.378  Sum_probs=84.7

Q ss_pred             CcEEE-EECCCcccccchHHHHHHHcCCCccHHHHHHHHhCCCCCHHHHHHHHHhccCC-CHHHHHHHHHhCCCCCCCcH
Q 028799           83 ADAVC-FDVDSTVCVDEGIDELAEFCGAGKAVAEWTARAMGGSVPFEEALAARLSLFKP-SLSQVQDFLEKRPPRLSPGI  160 (203)
Q Consensus        83 ~kaVI-FD~DGTLiDse~~~~la~~~G~~~~~~~~~~~~~gG~~~~~e~l~~~~~~~~~-~~e~l~~~~~~~~~~l~PG~  160 (203)
                      ++.++ |||||||+|++.+..+++.+|. ........++..|..++.+.+......+.+ ..+.+.+++..  ..++||+
T Consensus         8 mk~ivifDlDGTL~d~~~~~~~~~~~g~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~   84 (201)
T 4ap9_A            8 MKKVAVIDIEGTLTDFEFWREMARITGK-REIEELLEKGLSGEVEWLDSLLKRVGLIRGIDEGTFLRTREK--VNVSPEA   84 (201)
T ss_dssp             GSCEEEEECBTTTBCCCHHHHHHHHHCC-HHHHHHHHHHHHTSSCHHHHHHHHHHHTTTCBHHHHHHGGGG--CCCCHHH
T ss_pred             cceeEEecccCCCcchHHHHHHHHHhCh-HHHHHHHHHHhcCCCCHHHHHHHHHHHhcCCCHHHHHHHHHh--CCCChhH
Confidence            44555 9999999999988889989888 444566667777777888877776665555 45666666654  5899999


Q ss_pred             HHHHHHHHHCCCeEEEEcCCCHHHHHHHHHcCCCcc
Q 028799          161 DELVKKLKANNKNVYLISGGFRHMINILNILKWDVL  196 (203)
Q Consensus       161 ~elL~~Lk~~G~~vaIVTn~~~~~i~~ll~lGL~~~  196 (203)
                      .++|+.|+++|++++|+||++...++.+-.+|+..+
T Consensus        85 ~~~l~~l~~~g~~~~i~t~~~~~~~~~~~~~~~~~~  120 (201)
T 4ap9_A           85 RELVETLREKGFKVVLISGSFEEVLEPFKELGDEFM  120 (201)
T ss_dssp             HHHHHHHHHTTCEEEEEEEEETTTSGGGTTTSSEEE
T ss_pred             HHHHHHHHHCCCeEEEEeCCcHHHHHHHHHcCchhh
Confidence            999999999999999999998776543334566544

>3cnh_A Hydrolase family protein; NP_295428.1, predicted hydrolase of haloacid dehalogenase-LI superfamily; HET: MSE PG4; 1.66A {Deinococcus radiodurans R1}

Probab=99.46  E-value=4.3e-13  Score=105.74  Aligned_cols=119  Identities=13%  Similarity=0.147  Sum_probs=81.4

Q ss_pred             CCcEEEEECCCcccccch----HHHHHHHcCCCccHH-HH----HHHHhCCCCCHHHHHHHHHhccC-C-CHHHHHHHHH
Q 028799           82 TADAVCFDVDSTVCVDEG----IDELAEFCGAGKAVA-EW----TARAMGGSVPFEEALAARLSLFK-P-SLSQVQDFLE  150 (203)
Q Consensus        82 ~~kaVIFD~DGTLiDse~----~~~la~~~G~~~~~~-~~----~~~~~gG~~~~~e~l~~~~~~~~-~-~~e~l~~~~~  150 (203)
                      ++++|+|||||||+|++.    +...++.+|...... ..    ...+..|..+..+.+........ . ..+.+.+.+.
T Consensus         3 ~~k~viFDlDGTL~d~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (200)
T 3cnh_A            3 TIKALFWDIGGVLLTNGWDREQRADVAQRFGLDTDDFTERHRLAAPELELGRMTLAEYLEQVVFYQPRDFTPEDFRAVME   82 (200)
T ss_dssp             CCCEEEECCBTTTBCCSSCHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHTTSSCHHHHHHHHTTTSCCSSCHHHHHHHHH
T ss_pred             CceEEEEeCCCeeECCCcchHHHHHHHHHcCCCHHHHHHHHHhhchHHHcCCcCHHHHHHHHHHHcCCCCCHHHHHHHHH
Confidence            478999999999999763    445566778753221 11    11223444566555544333221 1 3444555443


Q ss_pred             hCCCCCCCcHHHHHHHHHHCCCeEEEEcCCCHHHHHHHH-HcCCCccceEEec
Q 028799          151 KRPPRLSPGIDELVKKLKANNKNVYLISGGFRHMINILN-ILKWDVLKVIQIT  202 (203)
Q Consensus       151 ~~~~~l~PG~~elL~~Lk~~G~~vaIVTn~~~~~i~~ll-~lGL~~~~~i~it  202 (203)
                      .. ..++||+.++|+.|+++| +++|+||++...++.++ .+|+..++...++
T Consensus        83 ~~-~~~~~~~~~~l~~l~~~g-~~~i~s~~~~~~~~~~l~~~~~~~~f~~~~~  133 (200)
T 3cnh_A           83 EQ-SQPRPEVLALARDLGQRY-RMYSLNNEGRDLNEYRIRTFGLGEFLLAFFT  133 (200)
T ss_dssp             HT-CCBCHHHHHHHHHHTTTS-EEEEEECCCHHHHHHHHHHHTGGGTCSCEEE
T ss_pred             hc-CccCccHHHHHHHHHHcC-CEEEEeCCcHHHHHHHHHhCCHHHhcceEEe
Confidence            32 569999999999999999 99999999999999998 9999877665544

>3n28_A Phosphoserine phosphatase; HAD family hydrolase, structural genomics, PSI, protein STRU initiative, nysgrc; 2.30A {Vibrio cholerae}

Probab=99.45  E-value=2.9e-13  Score=117.10  Aligned_cols=118  Identities=35%  Similarity=0.443  Sum_probs=97.5

Q ss_pred             ccCCcEEEEECCCcccccchHHHHHHHcCCCccHHHHHHHHhCCCCCHHHHHHHHHhccCC-CHHHHHHHHHhCCCCCCC
Q 028799           80 WRTADAVCFDVDSTVCVDEGIDELAEFCGAGKAVAEWTARAMGGSVPFEEALAARLSLFKP-SLSQVQDFLEKRPPRLSP  158 (203)
Q Consensus        80 ~~~~kaVIFD~DGTLiDse~~~~la~~~G~~~~~~~~~~~~~gG~~~~~e~l~~~~~~~~~-~~e~l~~~~~~~~~~l~P  158 (203)
                      +...++++|||||||++.+.+..+++.+|.......+..+++.|..++.+.+..++..+.+ ..+.+..+.+.  .+++|
T Consensus       104 i~~~~~viFD~DgTLi~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~--~~~~p  181 (335)
T 3n28_A          104 LTKPGLIVLDMDSTAIQIECIDEIAKLAGVGEEVAEVTERAMQGELDFEQSLRLRVSKLKDAPEQILSQVRET--LPLMP  181 (335)
T ss_dssp             TTSCCEEEECSSCHHHHHHHHHHHHHHHTCHHHHHHHHHHHHTTSSCHHHHHHHHHHTTTTCBTTHHHHHHTT--CCCCT
T ss_pred             ccCCCEEEEcCCCCCcChHHHHHHHHHcCCchHHHHHHHHHhcCCCCHHHHHHHHHHHhcCCCHHHHHHHHHh--CCcCc
Confidence            4556899999999999999999999999987666677778888889999888888776655 33333444333  68999


Q ss_pred             cHHHHHHHHHHCCCeEEEEcCCCHHHHHHHH-HcCCCccceE
Q 028799          159 GIDELVKKLKANNKNVYLISGGFRHMINILN-ILKWDVLKVI  199 (203)
Q Consensus       159 G~~elL~~Lk~~G~~vaIVTn~~~~~i~~ll-~lGL~~~~~i  199 (203)
                      |+.++++.|++.|++++|+||++...++.++ .+|+..++..
T Consensus       182 g~~~~l~~L~~~g~~~~ivS~~~~~~~~~~~~~lgl~~~~~~  223 (335)
T 3n28_A          182 ELPELVATLHAFGWKVAIASGGFTYFSDYLKEQLSLDYAQSN  223 (335)
T ss_dssp             THHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCSEEEEE
T ss_pred             CHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHcCCCeEEee
Confidence            9999999999999999999999999999999 9999876553

>3s6j_A Hydrolase, haloacid dehalogenase-like family; structural genomics, PSI-2; 2.20A {Pseudomonas syringae PV}

Probab=99.45  E-value=1.1e-12  Score=104.75  Aligned_cols=119  Identities=21%  Similarity=0.147  Sum_probs=81.8

Q ss_pred             cCCcEEEEECCCcccccch-----HHHHHHHcCCCccHHHHHHHHhCCCCCHHHHHHHHHhccCC--CHHHHH-------
Q 028799           81 RTADAVCFDVDSTVCVDEG-----IDELAEFCGAGKAVAEWTARAMGGSVPFEEALAARLSLFKP--SLSQVQ-------  146 (203)
Q Consensus        81 ~~~kaVIFD~DGTLiDse~-----~~~la~~~G~~~~~~~~~~~~~gG~~~~~e~l~~~~~~~~~--~~e~l~-------  146 (203)
                      .++++|+|||||||+|++.     +...++.+|....... .....+  .+..+.+.........  +.+.+.       
T Consensus         4 ~~~k~i~fDlDGTL~~~~~~~~~~~~~~~~~~g~~~~~~~-~~~~~g--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (233)
T 3s6j_A            4 RPQTSFIFDLDGTLTDSVYQNVAAWKEALDAENIPLAMWR-IHRKIG--MSGGLMLKSLSRETGMSITDEQAERLSEKHA   80 (233)
T ss_dssp             -CCCEEEECCBTTTEECHHHHHHHHHHHHHHTTCCCCHHH-HHHHTT--SCHHHHHHHHHHC----CCHHHHHHHHHHHH
T ss_pred             CcCcEEEEcCCCccccChHHHHHHHHHHHHHcCCCCCHHH-HHHHcC--CcHHHHHHHHHHhcCCCCCHHHHHHHHHHHH
Confidence            4689999999999999875     4455667787754433 333344  4444444444332211  222222       


Q ss_pred             HHHHh--CCCCCCCcHHHHHHHHHHCCCeEEEEcCCCHHHHHHHH-HcCCCccceEEec
Q 028799          147 DFLEK--RPPRLSPGIDELVKKLKANNKNVYLISGGFRHMINILN-ILKWDVLKVIQIT  202 (203)
Q Consensus       147 ~~~~~--~~~~l~PG~~elL~~Lk~~G~~vaIVTn~~~~~i~~ll-~lGL~~~~~i~it  202 (203)
                      +.+..  ....++||+.++|+.|++.|++++|+||+....++.++ .+|+..++...++
T Consensus        81 ~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~~~  139 (233)
T 3s6j_A           81 QAYERLQHQIIALPGAVELLETLDKENLKWCIATSGGIDTATINLKALKLDINKINIVT  139 (233)
T ss_dssp             HHHHHTGGGCEECTTHHHHHHHHHHTTCCEEEECSSCHHHHHHHHHTTTCCTTSSCEEC
T ss_pred             HHHHHhhccCccCCCHHHHHHHHHHCCCeEEEEeCCchhhHHHHHHhcchhhhhheeec
Confidence            22221  13689999999999999999999999999999999999 9999887776665

>2zg6_A Putative uncharacterized protein ST2620, probable 2-haloalkanoic; probable 2-haloalkanoic acid dehalogenase, hydrolase, structural genomics; 2.40A {Sulfolobus tokodaii}

Probab=99.44  E-value=4.2e-13  Score=108.27  Aligned_cols=119  Identities=19%  Similarity=0.133  Sum_probs=78.3

Q ss_pred             CCcEEEEECCCcccccch-----HHHHHHHcCCCccHHHHHHHH---hCC----------CCCHHHHHHHHHhccCCCHH
Q 028799           82 TADAVCFDVDSTVCVDEG-----IDELAEFCGAGKAVAEWTARA---MGG----------SVPFEEALAARLSLFKPSLS  143 (203)
Q Consensus        82 ~~kaVIFD~DGTLiDse~-----~~~la~~~G~~~~~~~~~~~~---~gG----------~~~~~e~l~~~~~~~~~~~e  143 (203)
                      ++++|+|||||||+|++.     +...++.+|.+....++...+   +|.          ...+...+. .++.. ...+
T Consensus         2 ~~k~viFDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~g~~~~~~~~~~g~~~~~~~~~-~~~~~-~~~~   79 (220)
T 2zg6_A            2 KYKAVLVDFGNTLVGFKPVFYEKVYQVLKDNGYDLDLRKVFRAYAKAMGMINYPDEDGLEHVDPKDFLY-ILGIY-PSER   79 (220)
T ss_dssp             CCCEEEECSBTTTEEEEETTHHHHHHHHHHTTCCCCHHHHHHHHHHHGGGCCC-----CCCCCHHHHHH-HHTCC-CCHH
T ss_pred             CceEEEEcCCCceecccccHHHHHHHHHHHhCCCCCHHHHHHHHHHHhhhccCCCccccccccHHHHHH-HcCCC-CcHH
Confidence            478999999999999874     455666778764433333322   221          122333332 23221 1333


Q ss_pred             HHHHHHHhC----CCCCCCcHHHHHHHHHHCCCeEEEEcCCCHHHHHHHH-HcCCCccceEEecC
Q 028799          144 QVQDFLEKR----PPRLSPGIDELVKKLKANNKNVYLISGGFRHMINILN-ILKWDVLKVIQITS  203 (203)
Q Consensus       144 ~l~~~~~~~----~~~l~PG~~elL~~Lk~~G~~vaIVTn~~~~~i~~ll-~lGL~~~~~i~it~  203 (203)
                      .+.++.+..    ..+++||+.++|+.|+++|++++|+||++.. ++.++ .+|+..++...++|
T Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~Tn~~~~-~~~~l~~~gl~~~f~~~~~~  143 (220)
T 2zg6_A           80 LVKELKEADIRDGEAFLYDDTLEFLEGLKSNGYKLALVSNASPR-VKTLLEKFDLKKYFDALALS  143 (220)
T ss_dssp             HHHHHHHTTTTCEEEEECTTHHHHHHHHHTTTCEEEECCSCHHH-HHHHHHHHTCGGGCSEEC--
T ss_pred             HHHHHHHHhhcccCceECcCHHHHHHHHHHCCCEEEEEeCCcHH-HHHHHHhcCcHhHeeEEEec
Confidence            444444321    2578999999999999999999999999874 77888 99998887776654

>3e58_A Putative beta-phosphoglucomutase; structu genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.86A {Streptococcus thermophilus lmg 18311}

Probab=99.44  E-value=4.7e-13  Score=104.92  Aligned_cols=119  Identities=13%  Similarity=0.059  Sum_probs=79.2

Q ss_pred             CCcEEEEECCCcccccch-----HHHHHHHcCCCccHHHHHHHHhCCCCCHHHHHHHHHhccC--CCHHH----HHHHHH
Q 028799           82 TADAVCFDVDSTVCVDEG-----IDELAEFCGAGKAVAEWTARAMGGSVPFEEALAARLSLFK--PSLSQ----VQDFLE  150 (203)
Q Consensus        82 ~~kaVIFD~DGTLiDse~-----~~~la~~~G~~~~~~~~~~~~~gG~~~~~e~l~~~~~~~~--~~~e~----l~~~~~  150 (203)
                      |+++|+|||||||+|++.     +...++.+|..... +......+  .+..+.+........  ...++    +.+++.
T Consensus         4 m~k~i~fDlDGTL~~~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~g--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (214)
T 3e58_A            4 MVEAIIFDMDGVLFDTEKYYYDRRASFLGQKGISIDH-LPPSFFIG--GNTKQVWENILRDEYDKWDVSTLQEEYNTYKQ   80 (214)
T ss_dssp             CCCEEEEESBTTTBCCHHHHHHHHHHHHHHTTCCCTT-SCHHHHTT--SCGGGCHHHHHGGGGGGSCHHHHHHHHHHHHH
T ss_pred             cccEEEEcCCCCccccHHHHHHHHHHHHHHcCCCCCH-HHHHHHcC--CCHHHHHHHHHHhhcCCCCHHHHHHHHHHHHH
Confidence            689999999999999875     44555667765322 12233333  222222332222211  12223    233333


Q ss_pred             hC----CCCCCCcHHHHHHHHHHCCCeEEEEcCCCHHHHHHHH-HcCCCccceEEecC
Q 028799          151 KR----PPRLSPGIDELVKKLKANNKNVYLISGGFRHMINILN-ILKWDVLKVIQITS  203 (203)
Q Consensus       151 ~~----~~~l~PG~~elL~~Lk~~G~~vaIVTn~~~~~i~~ll-~lGL~~~~~i~it~  203 (203)
                      +.    ...++||+.++|+.|+++|++++|+||+....++.++ .+|+..++...+++
T Consensus        81 ~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~  138 (214)
T 3e58_A           81 NNPLPYKELIFPDVLKVLNEVKSQGLEIGLASSSVKADIFRALEENRLQGFFDIVLSG  138 (214)
T ss_dssp             HSCCCHHHHBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGCSEEEEG
T ss_pred             HhhcccCCCcCchHHHHHHHHHHCCCCEEEEeCCcHHHHHHHHHHcCcHhheeeEeec
Confidence            32    1368999999999999999999999999999999999 99998877766653

>4eek_A Beta-phosphoglucomutase-related protein; hydrolase, magnesium binding site, enzyme function initiativ; 1.60A {Deinococcus radiodurans} PDB: 4eel_A* 4een_A

Probab=99.42  E-value=8.8e-13  Score=108.17  Aligned_cols=120  Identities=19%  Similarity=0.169  Sum_probs=83.3

Q ss_pred             cCCcEEEEECCCcccccch-----HHHHHHHcCCCccHHHHHHHHhCCCCCHHHHHHHHHhccC--CC---HHHHHHHHH
Q 028799           81 RTADAVCFDVDSTVCVDEG-----IDELAEFCGAGKAVAEWTARAMGGSVPFEEALAARLSLFK--PS---LSQVQDFLE  150 (203)
Q Consensus        81 ~~~kaVIFD~DGTLiDse~-----~~~la~~~G~~~~~~~~~~~~~gG~~~~~e~l~~~~~~~~--~~---~e~l~~~~~  150 (203)
                      .++++|+|||||||+|++.     +....+.+|......+....+.+  .+..+.+......+.  ..   .+.+.+.+.
T Consensus        26 ~~ik~i~fDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  103 (259)
T 4eek_A           26 APFDAVLFDLDGVLVESEGIIAQVWQSVLAERGLHLDLTEIAMYFTG--QRFDGVLAYLAQQHDFVPPPDFLDVLETRFN  103 (259)
T ss_dssp             CCCSEEEEESBTTTEECHHHHHHHHHHHHHHTTCCCCHHHHHHHTTT--CCHHHHHHHHHHHHCCCCCTTHHHHHHHHHH
T ss_pred             cCCCEEEECCCCCcccCHHHHHHHHHHHHHHhCCCCCHHHHHHHHhC--CCHHHHHHHHHHHcCCCCCHHHHHHHHHHHH
Confidence            4689999999999999875     34555677877554455555454  344554444322211  11   222222222


Q ss_pred             h--CCCCCCCcHHHHHHHHHHCCCeEEEEcCCCHHHHHHHH-HcCCCccceE-Eec
Q 028799          151 K--RPPRLSPGIDELVKKLKANNKNVYLISGGFRHMINILN-ILKWDVLKVI-QIT  202 (203)
Q Consensus       151 ~--~~~~l~PG~~elL~~Lk~~G~~vaIVTn~~~~~i~~ll-~lGL~~~~~i-~it  202 (203)
                      +  ....++||+.++|+.|+++|++++|+||+....++.++ .+|+..++.. .++
T Consensus       104 ~~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~i~~  159 (259)
T 4eek_A          104 AAMTGVTAIEGAAETLRALRAAGVPFAIGSNSERGRLHLKLRVAGLTELAGEHIYD  159 (259)
T ss_dssp             HHHTTCEECTTHHHHHHHHHHHTCCEEEECSSCHHHHHHHHHHTTCHHHHCSCEEC
T ss_pred             HHhccCCcCccHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHhcChHhhccceEEe
Confidence            1  34789999999999999999999999999999999999 9999877765 554

>3kzx_A HAD-superfamily hydrolase, subfamily IA, variant; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ehrlich chaffeensis; 1.90A {Ehrlichia chaffeensis}

Probab=99.42  E-value=1.8e-13  Score=110.05  Aligned_cols=118  Identities=17%  Similarity=0.039  Sum_probs=81.1

Q ss_pred             ccCCcEEEEECCCcccccc-----hH-HHHHHHcCCCccHHHHHHHHhCCCCCHHHHHHHHHhccCC-CHHHHHHHHH-h
Q 028799           80 WRTADAVCFDVDSTVCVDE-----GI-DELAEFCGAGKAVAEWTARAMGGSVPFEEALAARLSLFKP-SLSQVQDFLE-K  151 (203)
Q Consensus        80 ~~~~kaVIFD~DGTLiDse-----~~-~~la~~~G~~~~~~~~~~~~~gG~~~~~e~l~~~~~~~~~-~~e~l~~~~~-~  151 (203)
                      +.++++|+|||||||+|++     .+ ..+++.+|.....   .....+  .+..+.+......... ....+.+.+. .
T Consensus        22 m~~~k~i~fDlDGTL~d~~~~~~~~~~~~~~~~~g~~~~~---~~~~~g--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   96 (231)
T 3kzx_A           22 MKQPTAVIFDWYNTLIDTSINIDRTTFYQVLDQMGYKNID---LDSIPN--STIPKYLITLLGKRWKEATILYENSLEKS   96 (231)
T ss_dssp             CCCCSEEEECTBTTTEETTSSCCHHHHHHHHHHTTCCCCC---CTTSCT--TTHHHHHHHHHGGGHHHHHHHHHHHHHHC
T ss_pred             cCCCCEEEECCCCCCcCCchhHHHHHHHHHHHHcCCCHHH---HHHHhC--ccHHHHHHHHhCchHHHHHHHHHHHHhhh
Confidence            4578999999999999987     35 6677777765311   111111  2344444443321100 1122334444 1


Q ss_pred             ---CCCCCCCcHHHHHHHHHHCCCeEEEEcCCCHHHHHHHH-HcCCCccceEEec
Q 028799          152 ---RPPRLSPGIDELVKKLKANNKNVYLISGGFRHMINILN-ILKWDVLKVIQIT  202 (203)
Q Consensus       152 ---~~~~l~PG~~elL~~Lk~~G~~vaIVTn~~~~~i~~ll-~lGL~~~~~i~it  202 (203)
                         ....++||+.++|+.|+++|++++|+||++...++.++ .+|+..++...++
T Consensus        97 ~~~~~~~~~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~f~~i~~  151 (231)
T 3kzx_A           97 QKSDNFMLNDGAIELLDTLKENNITMAIVSNKNGERLRSEIHHKNLTHYFDSIIG  151 (231)
T ss_dssp             CSCCCCEECTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCGGGCSEEEE
T ss_pred             cccccceECcCHHHHHHHHHHCCCeEEEEECCCHHHHHHHHHHCCchhheeeEEc
Confidence               24679999999999999999999999999999999999 9999887776665

>4gib_A Beta-phosphoglucomutase; rossmann fold, HAD-like, structural genomics, center for structural genomics of infectious DISE csgid, isomerase; 2.27A {Clostridium difficile}

Probab=99.41  E-value=5.3e-13  Score=110.34  Aligned_cols=120  Identities=18%  Similarity=0.162  Sum_probs=75.7

Q ss_pred             hccCCcEEEEECCCcccccch-----HHHHHHHcCCCccHHHHHHHHhCCCCCHHHHHHHHHhccC---C-CHH------
Q 028799           79 LWRTADAVCFDVDSTVCVDEG-----IDELAEFCGAGKAVAEWTARAMGGSVPFEEALAARLSLFK---P-SLS------  143 (203)
Q Consensus        79 ~~~~~kaVIFD~DGTLiDse~-----~~~la~~~G~~~~~~~~~~~~~gG~~~~~e~l~~~~~~~~---~-~~e------  143 (203)
                      -..|+|+|+|||||||+||+.     |..+++.+|.+... +......+  .+..+.+........   . ...      
T Consensus        22 ~~~MIKaViFDlDGTLvDs~~~~~~a~~~~~~~~g~~~~~-~~~~~~~g--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   98 (250)
T 4gib_A           22 SNAMIEAFIFDLDGVITDTAYYHYMAWRKLAHKVGIDIDT-KFNESLKG--ISRMESLDRILEFGNKKYSFSEEEKVRMA   98 (250)
T ss_dssp             --CCCCEEEECTBTTTBCCHHHHHHHHHHHHHTTTCCCCT-TGGGGTTT--CCHHHHHHHHHHHTTCTTTSCHHHHHHHH
T ss_pred             ccchhheeeecCCCcccCCHHHHHHHHHHHHHHcCCCCCH-HHHHHHhC--cchHHHHHHhhhhhcCCCCCCHHHHHHHH
Confidence            356799999999999999875     44556667775321 22222222  333333333222111   1 111      


Q ss_pred             -HHHHHHH----h-CCCCCCCcHHHHHHHHHHCCCeEEEEcCCCHHHHHHHH-HcCCCccceEEecC
Q 028799          144 -QVQDFLE----K-RPPRLSPGIDELVKKLKANNKNVYLISGGFRHMINILN-ILKWDVLKVIQITS  203 (203)
Q Consensus       144 -~l~~~~~----~-~~~~l~PG~~elL~~Lk~~G~~vaIVTn~~~~~i~~ll-~lGL~~~~~i~it~  203 (203)
                       ...+++.    + ....++||+.++++.|+++|++++++|++..  +...+ .+|+..++..+++|
T Consensus        99 ~~~~~~~~~~~~~~~~~~~~p~~~~ll~~Lk~~g~~i~i~~~~~~--~~~~L~~~gl~~~Fd~i~~~  163 (250)
T 4gib_A           99 EEKNNYYVSLIDEITSNDILPGIESLLIDVKSNNIKIGLSSASKN--AINVLNHLGISDKFDFIADA  163 (250)
T ss_dssp             HHHHHHHHHHHTTCCGGGSCTTHHHHHHHHHHTTCEEEECCSCTT--HHHHHHHHTCGGGCSEECCG
T ss_pred             HHHHHHHHHHHhhccccccchhHHHHHHHHHhcccccccccccch--hhhHhhhcccccccceeecc
Confidence             1122222    1 1346899999999999999999999888754  45677 99999998888765

>3l5k_A Protein GS1, haloacid dehalogenase-like hydrolase domain- containing protein 1A; HDHD1A, haloacid dehalogenase-like hydrolase domain containing 1A; 2.00A {Homo sapiens}

Probab=99.41  E-value=1.2e-12  Score=106.77  Aligned_cols=121  Identities=15%  Similarity=0.144  Sum_probs=80.3

Q ss_pred             hccCCcEEEEECCCcccccch-----HHHHHHHcCCCccHHHHHHHHhCCCCCHHHHHHHHHhccC--CCHHHHH----H
Q 028799           79 LWRTADAVCFDVDSTVCVDEG-----IDELAEFCGAGKAVAEWTARAMGGSVPFEEALAARLSLFK--PSLSQVQ----D  147 (203)
Q Consensus        79 ~~~~~kaVIFD~DGTLiDse~-----~~~la~~~G~~~~~~~~~~~~~gG~~~~~e~l~~~~~~~~--~~~e~l~----~  147 (203)
                      .+.++++|+|||||||+|++.     +..+.+.+|..... +....+.+  .+..+.+......+.  .+.+++.    +
T Consensus        26 ~~~~ik~i~fDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~g--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  102 (250)
T 3l5k_A           26 PPQPVTHLIFDMDGLLLDTERLYSVVFQEICNRYDKKYSW-DVKSLVMG--KKALEAAQIIIDVLQLPMSKEELVEESQT  102 (250)
T ss_dssp             CCCCCSEEEEETBTTTBCHHHHHHHHHHHHHHHTTCCCCH-HHHHHHTT--CCHHHHHHHHHHHHTCSSCHHHHHHHHHH
T ss_pred             cccCCcEEEEcCCCCcCCCHHHHHHHHHHHHHHhCCCCCH-HHHHHhcC--CCHHHHHHHHHHHhCCCCCHHHHHHHHHH
Confidence            346789999999999999864     44566677876443 33344454  344444443332221  1333332    2


Q ss_pred             HHHh--CCCCCCCcHHHHHHHHHHCCCeEEEEcCCCHHHHHHHH-H-cCCCccceEEec
Q 028799          148 FLEK--RPPRLSPGIDELVKKLKANNKNVYLISGGFRHMINILN-I-LKWDVLKVIQIT  202 (203)
Q Consensus       148 ~~~~--~~~~l~PG~~elL~~Lk~~G~~vaIVTn~~~~~i~~ll-~-lGL~~~~~i~it  202 (203)
                      .+.+  ....++||+.++|+.|+++|++++|+||+....+...+ . +|+..++...++
T Consensus       103 ~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~sn~~~~~~~~~l~~~~~l~~~f~~~~~  161 (250)
T 3l5k_A          103 KLKEVFPTAALMPGAEKLIIHLRKHGIPFALATSSRSASFDMKTSRHKEFFSLFSHIVL  161 (250)
T ss_dssp             HHHHHGGGCCBCTTHHHHHHHHHHTTCCEEEECSCCHHHHHHHTTTCHHHHTTSSCEEC
T ss_pred             HHHHHhccCCCCCCHHHHHHHHHhCCCcEEEEeCCCHHHHHHHHHhccCHHhheeeEEe
Confidence            2221  13689999999999999999999999999988777665 4 577766665554

>3qxg_A Inorganic pyrophosphatase; hydrolase, magnesium binding site, NEW YORK research center for structural genomics; HET: TLA; 1.24A {Bacteroides thetaiotaomicron} PDB: 3qu2_A* 3qx7_A 3quq_A* 3r9k_A 3qut_A 3qu9_A* 3qu7_A 3qu5_A 3qyp_A 3quc_A 3qub_A 3qu4_A

Probab=99.41  E-value=1.3e-12  Score=106.27  Aligned_cols=121  Identities=13%  Similarity=0.158  Sum_probs=79.7

Q ss_pred             hccCCcEEEEECCCcccccch-----HHHHHHHcCCCccHHHHHHHHhCCCCCHHHHHHHHHhc-c--CCCHHHHHH---
Q 028799           79 LWRTADAVCFDVDSTVCVDEG-----IDELAEFCGAGKAVAEWTARAMGGSVPFEEALAARLSL-F--KPSLSQVQD---  147 (203)
Q Consensus        79 ~~~~~kaVIFD~DGTLiDse~-----~~~la~~~G~~~~~~~~~~~~~gG~~~~~e~l~~~~~~-~--~~~~e~l~~---  147 (203)
                      .+.++++|+|||||||+|++.     +..+.+.+|........ ....+  ....+.+...+.. +  ..+.+.+.+   
T Consensus        20 ~m~~~k~i~fDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~-~~~~g--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   96 (243)
T 3qxg_A           20 MRKKLKAVLFDMDGVLFNSMPYHSEAWHQVMKTHGLDLSREEA-YMHEG--RTGASTINIVFQRELGKEATQEEIESIYH   96 (243)
T ss_dssp             --CCCCEEEECSBTTTBCCHHHHHHHHHHHHHHTTCCCCHHHH-HHTTT--SCHHHHHHHHHHHHHSSCCCHHHHHHHHH
T ss_pred             ccccCCEEEEcCCCCCCCCHHHHHHHHHHHHHHhCCCCCHHHH-HHHhC--CCHHHHHHHHHHHHhCCCCCHHHHHHHHH
Confidence            456789999999999999874     45566678876543332 22233  2322222222211 1  113333332   


Q ss_pred             ----HHHh-CCCCCCCcHHHHHHHHHHCCCeEEEEcCCCHHHHHHHH-HcCCCccc--eEEecC
Q 028799          148 ----FLEK-RPPRLSPGIDELVKKLKANNKNVYLISGGFRHMINILN-ILKWDVLK--VIQITS  203 (203)
Q Consensus       148 ----~~~~-~~~~l~PG~~elL~~Lk~~G~~vaIVTn~~~~~i~~ll-~lGL~~~~--~i~it~  203 (203)
                          ++.. ....++||+.++|+.|+++|++++|+||++...+...+ . |+..++  ..++++
T Consensus        97 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~-~l~~~f~~d~i~~~  159 (243)
T 3qxg_A           97 EKSILFNSYPEAERMPGAWELLQKVKSEGLTPMVVTGSGQLSLLERLEH-NFPGMFHKELMVTA  159 (243)
T ss_dssp             HHHHHHHTSSCCCBCTTHHHHHHHHHHTTCEEEEECCCCCHHHHTTHHH-HSTTTCCGGGEECT
T ss_pred             HHHHHHHhcccCCCCCCHHHHHHHHHHcCCcEEEEeCCcHHHHHHHHHH-hHHHhcCcceEEeH
Confidence                2222 23689999999999999999999999999998888888 8 998877  666653

>2i6x_A Hydrolase, haloacid dehalogenase-like family; HAD superfamily, struct genomics, PSI-2, protein structure initiative; HET: MSE; 2.40A {Porphyromonas gingivalis}

Probab=99.41  E-value=7e-13  Score=105.20  Aligned_cols=120  Identities=13%  Similarity=0.052  Sum_probs=78.5

Q ss_pred             cCCcEEEEECCCcccccchH--HHHHHHcCCCccHHHHH---------HHHhCCCCCHHHHHHHHHhccC--CCHHHHHH
Q 028799           81 RTADAVCFDVDSTVCVDEGI--DELAEFCGAGKAVAEWT---------ARAMGGSVPFEEALAARLSLFK--PSLSQVQD  147 (203)
Q Consensus        81 ~~~kaVIFD~DGTLiDse~~--~~la~~~G~~~~~~~~~---------~~~~gG~~~~~e~l~~~~~~~~--~~~e~l~~  147 (203)
                      .++++|+|||||||+|++..  ...+..+|.... .+..         ..+..|..+..+........+.  .+.+++.+
T Consensus         3 ~m~k~iiFDlDGTL~d~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (211)
T 2i6x_A            3 AMIRNIVFDLGGVLIHLNREESIRRFKAIGVADI-EEMLDPYLQKGLFLDLESGRKSEEEFRTELSRYIGKELTYQQVYD   81 (211)
T ss_dssp             CCCSEEEECSBTTTEEECHHHHHHHHHHTTCTTH-HHHTCC---CCHHHHHHHSSSCHHHHHHHHHHHHTSCCCHHHHHH
T ss_pred             ccceEEEEeCCCeeEecchHHHHHHHHHhCCchH-HHHHHHHhCchHHHHHHcCCCCHHHHHHHHHHHhCCCCCHHHHHH
Confidence            36799999999999998763  234455665432 1111         1111233444444333222221  24444444


Q ss_pred             HHHhCCCCCCCcHHHHHHHHHHCCCeEEEEcCCCHHHHHHHH-H------cCCCccceEEec
Q 028799          148 FLEKRPPRLSPGIDELVKKLKANNKNVYLISGGFRHMINILN-I------LKWDVLKVIQIT  202 (203)
Q Consensus       148 ~~~~~~~~l~PG~~elL~~Lk~~G~~vaIVTn~~~~~i~~ll-~------lGL~~~~~i~it  202 (203)
                      .+......++||+.++|+.|++ |++++|+||++...++.++ .      +|+..++...++
T Consensus        82 ~~~~~~~~~~~~~~~~l~~l~~-g~~~~i~t~~~~~~~~~~~~~l~~~~~~~l~~~f~~~~~  142 (211)
T 2i6x_A           82 ALLGFLEEISAEKFDYIDSLRP-DYRLFLLSNTNPYVLDLAMSPRFLPSGRTLDSFFDKVYA  142 (211)
T ss_dssp             HHGGGEEEECHHHHHHHHHHTT-TSEEEEEECCCHHHHHHHTSTTSSTTCCCGGGGSSEEEE
T ss_pred             HHHHhhcccChHHHHHHHHHHc-CCeEEEEeCCCHHHHHHHHhhhccccccCHHHHcCeEEe
Confidence            4433234789999999999999 9999999999999998888 7      899887766654

>3ed5_A YFNB; APC60080, bacillus subtilis subsp. subtilis STR. 168, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.72A {Bacillus subtilis} PDB: 3i76_A

Probab=99.40  E-value=2.6e-12  Score=102.90  Aligned_cols=122  Identities=14%  Similarity=0.101  Sum_probs=82.4

Q ss_pred             ccCCcEEEEECCCcccccch-----HHHHHHHcCCCccHH----------HHHHHHhCCCCCHHHHHHHHH----hccC-
Q 028799           80 WRTADAVCFDVDSTVCVDEG-----IDELAEFCGAGKAVA----------EWTARAMGGSVPFEEALAARL----SLFK-  139 (203)
Q Consensus        80 ~~~~kaVIFD~DGTLiDse~-----~~~la~~~G~~~~~~----------~~~~~~~gG~~~~~e~l~~~~----~~~~-  139 (203)
                      +.++++|+|||||||+|++.     +...++.+|......          .....+..|.++..+.....+    .... 
T Consensus         4 mm~~k~i~fDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (238)
T 3ed5_A            4 MKRYRTLLFDVDDTILDFQAAEALALRLLFEDQNIPLTNDMKAQYKTINQGLWRAFEEGKMTRDEVVNTRFSALLKEYGY   83 (238)
T ss_dssp             CCCCCEEEECCBTTTBCHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHHHHHTTC
T ss_pred             cccCCEEEEcCcCcCcCCchhHHHHHHHHHHHcCCCcchHHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHcCC
Confidence            45689999999999999865     334566778763321          122223345555554433222    2111 


Q ss_pred             -CCHHHHHHHHHh---CCCCCCCcHHHHHHHHHHCCCeEEEEcCCCHHHHHHHH-HcCCCccceEEec
Q 028799          140 -PSLSQVQDFLEK---RPPRLSPGIDELVKKLKANNKNVYLISGGFRHMINILN-ILKWDVLKVIQIT  202 (203)
Q Consensus       140 -~~~e~l~~~~~~---~~~~l~PG~~elL~~Lk~~G~~vaIVTn~~~~~i~~ll-~lGL~~~~~i~it  202 (203)
                       ...+.+.+.+.+   ....++||+.++|+.|++. ++++|+||+....++..+ .+|+..++...++
T Consensus        84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~-~~~~i~t~~~~~~~~~~l~~~~l~~~f~~~~~  150 (238)
T 3ed5_A           84 EADGALLEQKYRRFLEEGHQLIDGAFDLISNLQQQ-FDLYIVTNGVSHTQYKRLRDSGLFPFFKDIFV  150 (238)
T ss_dssp             CCCHHHHHHHHHHHHTTCCCBCTTHHHHHHHHHTT-SEEEEEECSCHHHHHHHHHHTTCGGGCSEEEE
T ss_pred             CCcHHHHHHHHHHHHHhcCCCCccHHHHHHHHHhc-CeEEEEeCCCHHHHHHHHHHcChHhhhheEEE
Confidence             133444444332   2368999999999999999 999999999999999999 9999887776665

>1rku_A Homoserine kinase; phosphoserine phosphatase, phosphoserine:homoserine phosphotransferase, THRH, phosphoserine phosphoryl donor; 1.47A {Pseudomonas aeruginosa} SCOP: c.108.1.11 PDB: 1rkv_A

Probab=99.39  E-value=1.8e-12  Score=103.05  Aligned_cols=108  Identities=19%  Similarity=0.265  Sum_probs=75.6

Q ss_pred             CCcEEEEECCCcccccchHHHHHHHcCCCccHHHHHHHHhCCCCCHHHHHHHHHhcc--CC-CHHHHHHHHHhCCCCCCC
Q 028799           82 TADAVCFDVDSTVCVDEGIDELAEFCGAGKAVAEWTARAMGGSVPFEEALAARLSLF--KP-SLSQVQDFLEKRPPRLSP  158 (203)
Q Consensus        82 ~~kaVIFD~DGTLiDse~~~~la~~~G~~~~~~~~~~~~~gG~~~~~e~l~~~~~~~--~~-~~e~l~~~~~~~~~~l~P  158 (203)
                      ++++|+|||||||+| +.+..+++.+|.+..     .....+...+.+.+......+  .+ +.+++.+++.  ..+++|
T Consensus         1 ~~k~viFD~DGTL~d-~~~~~~~~~~g~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~   72 (206)
T 1rku_A            1 DMEIACLDLEGVLVP-EIWIAFAEKTGIDAL-----KATTRDIPDYDVLMKQRLRILDEHGLKLGDIQEVIA--TLKPLE   72 (206)
T ss_dssp             CCEEEEEESBTTTBC-CHHHHHHHHHTCGGG-----GCCTTTCCCHHHHHHHHHHHHHHTTCCHHHHHHHHT--TCCCCT
T ss_pred             CCcEEEEccCCcchh-hHHHHHHHHcCChHH-----HHHhcCcCCHHHHHHHHHHHHHHCCCCHHHHHHHHH--hcCCCc
Confidence            368999999999999 678888888887531     000111222332222211111  12 3455555553  468999


Q ss_pred             cHHHHHHHHHHCCCeEEEEcCCCHHHHHHHH-HcCCCccce
Q 028799          159 GIDELVKKLKANNKNVYLISGGFRHMINILN-ILKWDVLKV  198 (203)
Q Consensus       159 G~~elL~~Lk~~G~~vaIVTn~~~~~i~~ll-~lGL~~~~~  198 (203)
                      |+.++|+.|+++ ++++|+||++...++.++ .+|+..++.
T Consensus        73 g~~~~l~~l~~~-~~~~i~s~~~~~~~~~~l~~~gl~~~f~  112 (206)
T 1rku_A           73 GAVEFVDWLRER-FQVVILSDTFYEFSQPLMRQLGFPTLLC  112 (206)
T ss_dssp             THHHHHHHHHTT-SEEEEEEEEEHHHHHHHHHHTTCCCEEE
T ss_pred             cHHHHHHHHHhc-CcEEEEECChHHHHHHHHHHcCCcceec
Confidence            999999999999 999999999999999999 999988773

>3dv9_A Beta-phosphoglucomutase; structural genomics, APC60149, PSI- protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.72A {Bacteroides vulgatus}

Probab=99.39  E-value=2e-12  Score=104.33  Aligned_cols=118  Identities=14%  Similarity=0.121  Sum_probs=76.0

Q ss_pred             cCCcEEEEECCCcccccch-----HHHHHHHcCCCccHHHHHHHHhCCCCCHHHHHHHHHhc-c--CCCHHHHHHH----
Q 028799           81 RTADAVCFDVDSTVCVDEG-----IDELAEFCGAGKAVAEWTARAMGGSVPFEEALAARLSL-F--KPSLSQVQDF----  148 (203)
Q Consensus        81 ~~~kaVIFD~DGTLiDse~-----~~~la~~~G~~~~~~~~~~~~~gG~~~~~e~l~~~~~~-~--~~~~e~l~~~----  148 (203)
                      .++++|+|||||||+|++.     +....+.+|........ ....+  ....+.+...+.. +  ..+.+.+.+.    
T Consensus        21 ~~~k~i~fDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~-~~~~g--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   97 (247)
T 3dv9_A           21 IDLKAVLFDMDGVLFDSMPNHAESWHKIMKRFGFGLSREEA-YMHEG--RTGASTINIVSRRERGHDATEEEIKAIYQAK   97 (247)
T ss_dssp             CCCCEEEEESBTTTBCCHHHHHHHHHHHHHHTTCCCCHHHH-HHTTT--SCHHHHHHHHHHHHHSSCCCHHHHHHHHHHH
T ss_pred             CCCCEEEECCCCccCcCHHHHHHHHHHHHHHcCCCCCHHHH-HHHhC--CChHHHHHHHHHHhcCCCCCHHHHHHHHHHH
Confidence            4579999999999999864     44566677876543332 22333  2323333222211 1  1133333322    


Q ss_pred             ---HHh-CCCCCCCcHHHHHHHHHHCCCeEEEEcCCCHHHHHHHH-HcCCCccc--eEEec
Q 028799          149 ---LEK-RPPRLSPGIDELVKKLKANNKNVYLISGGFRHMINILN-ILKWDVLK--VIQIT  202 (203)
Q Consensus       149 ---~~~-~~~~l~PG~~elL~~Lk~~G~~vaIVTn~~~~~i~~ll-~lGL~~~~--~i~it  202 (203)
                         +.. ....++||+.++|+.|+++|++++|+||+....+...+ . |+..++  ...++
T Consensus        98 ~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~-~l~~~f~~~~~~~  157 (247)
T 3dv9_A           98 TEEFNKCPKAERMPGALEVLTKIKSEGLTPMVVTGSGQTSLLDRLNH-NFPGIFQANLMVT  157 (247)
T ss_dssp             HHHHTTSCCCCBCTTHHHHHHHHHHTTCEEEEECSCC---CHHHHHH-HSTTTCCGGGEEC
T ss_pred             HHHHHhcccCCCCCCHHHHHHHHHHcCCcEEEEcCCchHHHHHHHHh-hHHHhcCCCeEEe
Confidence               222 23689999999999999999999999999999888888 8 998877  55555

>3nas_A Beta-PGM, beta-phosphoglucomutase; PSI, structural genomics, protein structure initiative, NEW research center for structural genomics; 3.00A {Bacillus subtilis}

Probab=99.39  E-value=4.3e-12  Score=101.87  Aligned_cols=117  Identities=23%  Similarity=0.177  Sum_probs=77.2

Q ss_pred             CCcEEEEECCCcccccch-----HHHHHHHcCCCccHHHHHHHHhCCCCCHHHHHHHHHhccC----CCHHHHH------
Q 028799           82 TADAVCFDVDSTVCVDEG-----IDELAEFCGAGKAVAEWTARAMGGSVPFEEALAARLSLFK----PSLSQVQ------  146 (203)
Q Consensus        82 ~~kaVIFD~DGTLiDse~-----~~~la~~~G~~~~~~~~~~~~~gG~~~~~e~l~~~~~~~~----~~~e~l~------  146 (203)
                      ++++|+|||||||+|++.     +..+.+.+|..... +....+.+  .+..+.+...+....    .+.+.+.      
T Consensus         1 ~ik~i~fDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~g--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   77 (233)
T 3nas_A            1 SLKAVIFDLDGVITDTAEYHFLAWKHIAEQIDIPFDR-DMNERLKG--ISREESLESILIFGGAETKYTNAEKQELMHRK   77 (233)
T ss_dssp             -CCEEEECSBTTTBCHHHHHHHHHHHHHHHTTCCCCH-HHHHHTTT--CCHHHHHHHHHHHTTCTTTSCHHHHHHHHHHH
T ss_pred             CCcEEEECCCCCcCCCHHHHHHHHHHHHHHcCCCCCH-HHHHHHcC--CCHHHHHHHHHHHhCCCCCCCHHHHHHHHHHH
Confidence            478999999999999874     45566778877442 33344444  344444444333211    1222221      


Q ss_pred             -HHHH----hC-CCCCCCcHHHHHHHHHHCCCeEEEEcCCCHHHHHHHH-HcCCCccceEEecC
Q 028799          147 -DFLE----KR-PPRLSPGIDELVKKLKANNKNVYLISGGFRHMINILN-ILKWDVLKVIQITS  203 (203)
Q Consensus       147 -~~~~----~~-~~~l~PG~~elL~~Lk~~G~~vaIVTn~~~~~i~~ll-~lGL~~~~~i~it~  203 (203)
                       +.+.    .. ...++||+.++|+.|+++|++++|+||+..  ++.++ .+|+..++...+++
T Consensus        78 ~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~--~~~~l~~~gl~~~f~~i~~~  139 (233)
T 3nas_A           78 NRDYQMLISKLTPEDLLPGIGRLLCQLKNENIKIGLASSSRN--APKILRRLAIIDDFHAIVDP  139 (233)
T ss_dssp             HHHHHHHHHTCCGGGSCTTHHHHHHHHHHTTCEEEECCSCTT--HHHHHHHTTCTTTCSEECCC
T ss_pred             HHHHHHHHhhcCcCCcCcCHHHHHHHHHHCCCcEEEEcCchh--HHHHHHHcCcHhhcCEEeeH
Confidence             2222    11 123899999999999999999999999966  67788 99998887776654

>2p11_A Hypothetical protein; putative haloacid dehalogenase-like hydrolase, structural GE joint center for structural genomics, JCSG; 2.20A {Burkholderia xenovorans}

Probab=99.39  E-value=2.3e-13  Score=110.73  Aligned_cols=116  Identities=17%  Similarity=0.077  Sum_probs=74.3

Q ss_pred             cCCcEEEEECCCcccccch-----HHHHHHHcCCCccH-----HHHHHHHhCCCCCHHHHHHHHHhccC-C-CHHHHHHH
Q 028799           81 RTADAVCFDVDSTVCVDEG-----IDELAEFCGAGKAV-----AEWTARAMGGSVPFEEALAARLSLFK-P-SLSQVQDF  148 (203)
Q Consensus        81 ~~~kaVIFD~DGTLiDse~-----~~~la~~~G~~~~~-----~~~~~~~~gG~~~~~e~l~~~~~~~~-~-~~e~l~~~  148 (203)
                      ..+++|+|||||||+|++.     +..+++.+|.....     .+...... |...+.+.+........ . ..+.+.++
T Consensus         9 ~~~k~viFDlDGTL~ds~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~   87 (231)
T 2p11_A            9 PHDIVFLFDCDNTLLDNDHVLADLRAHMMREFGAQNSARYWEIFETLRTEL-GYADYLGALQRYRLEQPRDTRLLLMSSF   87 (231)
T ss_dssp             CCSEEEEECCBTTTBCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHC--CCCHHHHHHHHHHHCTTCTGGGGGHHH
T ss_pred             CCCeEEEEcCCCCCEecHHHHHHHHHHHHHHcCCCcchHHHHHHHHHHHhc-CchHHHHHHHHHHhccccchHHHHHHHH
Confidence            4578999999999999975     33455566754221     11112223 33334444433221111 1 12223344


Q ss_pred             HHhC--CCCCCCcHHHHHHHHHHCCCeEEEEcCCCHHHHHHHH-HcCCCccce
Q 028799          149 LEKR--PPRLSPGIDELVKKLKANNKNVYLISGGFRHMINILN-ILKWDVLKV  198 (203)
Q Consensus       149 ~~~~--~~~l~PG~~elL~~Lk~~G~~vaIVTn~~~~~i~~ll-~lGL~~~~~  198 (203)
                      +...  ...++||+.++|+.|+++| +++|+||+++..++.++ .+|+..++.
T Consensus        88 ~~~~~~~~~~~~g~~~~l~~l~~~g-~~~i~Tn~~~~~~~~~l~~~gl~~~f~  139 (231)
T 2p11_A           88 LIDYPFASRVYPGALNALRHLGARG-PTVILSDGDVVFQPRKIARSGLWDEVE  139 (231)
T ss_dssp             HHHCCGGGGBCTTHHHHHHHHHTTS-CEEEEEECCSSHHHHHHHHTTHHHHTT
T ss_pred             HHHHHHhCCcCccHHHHHHHHHhCC-CEEEEeCCCHHHHHHHHHHcCcHHhcC
Confidence            4332  3579999999999999999 99999999999999999 999876553

>3sd7_A Putative phosphatase; structural genomics, haloacid dehalogenase-like hydrolase, H center for structural genomics of infectious diseases; HET: PGE; 1.70A {Clostridium difficile}

Probab=99.38  E-value=3.3e-13  Score=109.33  Aligned_cols=115  Identities=13%  Similarity=0.171  Sum_probs=78.9

Q ss_pred             CCcEEEEECCCcccccch-----HHHHHHHcCCCccHHHHHHHHhCCCCCHHHHHHHHHhccCCCHHH-------HHHHH
Q 028799           82 TADAVCFDVDSTVCVDEG-----IDELAEFCGAGKAVAEWTARAMGGSVPFEEALAARLSLFKPSLSQ-------VQDFL  149 (203)
Q Consensus        82 ~~kaVIFD~DGTLiDse~-----~~~la~~~G~~~~~~~~~~~~~gG~~~~~e~l~~~~~~~~~~~e~-------l~~~~  149 (203)
                      ++++|+||+||||+|++.     +..+++.+|.... .+....+.+  .+..+.+...++.   +.+.       +.+.+
T Consensus        28 mik~iifDlDGTL~d~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~g--~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~  101 (240)
T 3sd7_A           28 NYEIVLFDLDGTLTDPKEGITKSIQYSLNSFGIKED-LENLDQFIG--PPLHDTFKEYYKF---EDKKAKEAVEKYREYF  101 (240)
T ss_dssp             CCSEEEECSBTTTEECHHHHHHHHHHHHHHTTCCCC-GGGGGGGSS--SCHHHHHHHTSCC---CHHHHHHHHHHHHHHH
T ss_pred             hccEEEEecCCcCccCHHHHHHHHHHHHHHcCCCCC-HHHHHHHhC--ccHHHHHHHHhCC---CHHHHHHHHHHHHHHH
Confidence            579999999999999874     4455667776622 222233333  3444444333211   2211       22222


Q ss_pred             Hh---CCCCCCCcHHHHHHHHHHCCCeEEEEcCCCHHHHHHHH-HcCCCccceEEec
Q 028799          150 EK---RPPRLSPGIDELVKKLKANNKNVYLISGGFRHMINILN-ILKWDVLKVIQIT  202 (203)
Q Consensus       150 ~~---~~~~l~PG~~elL~~Lk~~G~~vaIVTn~~~~~i~~ll-~lGL~~~~~i~it  202 (203)
                      .+   ....++||+.++|+.|+++|++++|+||+....++.++ .+|+..++...++
T Consensus       102 ~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~~~  158 (240)
T 3sd7_A          102 ADKGIFENKIYENMKEILEMLYKNGKILLVATSKPTVFAETILRYFDIDRYFKYIAG  158 (240)
T ss_dssp             HHTGGGCCEECTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCGGGCSEEEE
T ss_pred             HHhcccccccCccHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHcCcHhhEEEEEe
Confidence            22   13679999999999999999999999999999999999 9999887776664

>2b0c_A Putative phosphatase; alpha-D-glucose-1-phosphate, structural genomic protein structure initiative, midwest center for structural genomics, MCSG; HET: G1P; 2.00A {Escherichia coli} SCOP: c.108.1.2

Probab=99.38  E-value=9.3e-14  Score=109.71  Aligned_cols=121  Identities=12%  Similarity=-0.017  Sum_probs=75.7

Q ss_pred             cCCcEEEEECCCcccccc--hHHHHHHHcCCCccHHHHHH---------HHhCCCCCHHHHHHHHHhccC--CCHHHHHH
Q 028799           81 RTADAVCFDVDSTVCVDE--GIDELAEFCGAGKAVAEWTA---------RAMGGSVPFEEALAARLSLFK--PSLSQVQD  147 (203)
Q Consensus        81 ~~~kaVIFD~DGTLiDse--~~~~la~~~G~~~~~~~~~~---------~~~gG~~~~~e~l~~~~~~~~--~~~e~l~~  147 (203)
                      .++++|+|||||||+|++  .+......+|.... .+...         .+..|..+..+..........  .+.+++.+
T Consensus         5 ~~~k~viFDlDGTL~d~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (206)
T 2b0c_A            5 EAKMLYIFDLGNVIVDIDFNRVLGAWSDLTRIPL-ASLKKSFHMGEAFHQHERGEISDEAFAEALCHEMALPLSYEQFSH   83 (206)
T ss_dssp             -CCCEEEECCBTTTEEEETHHHHHHHHHHHCCCH-HHHHHHCCCCHHHHHHHTTCSCHHHHHHHHHHHHTCCCCHHHHHH
T ss_pred             ccccEEEEcCCCeeecCcHHHHHHHHHHhcCCCH-HHHHHHHhcccHHHHHhcCCCCHHHHHHHHHHHhCCCCCHHHHHH
Confidence            468999999999999998  23333444444321 22222         222344555444333222221  14445555


Q ss_pred             HHHhCCCCCCCcHHHHHHHHHHCCCeEEEEcCCCHHHHHHHH-H-cCCCccceEEec
Q 028799          148 FLEKRPPRLSPGIDELVKKLKANNKNVYLISGGFRHMINILN-I-LKWDVLKVIQIT  202 (203)
Q Consensus       148 ~~~~~~~~l~PG~~elL~~Lk~~G~~vaIVTn~~~~~i~~ll-~-lGL~~~~~i~it  202 (203)
                      .+......++||+.++|+.|+++|++++|+||++...++.++ . +|+..++..+++
T Consensus        84 ~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~~~~~~~l~~~f~~~~~  140 (206)
T 2b0c_A           84 GWQAVFVALRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEEYPEIRDAADHIYL  140 (206)
T ss_dssp             HHHTCEEEECHHHHHHHHHHHHTTCEEEEEECCCCCTTSCCGGGCHHHHHHCSEEEE
T ss_pred             HHHHHhcccCccHHHHHHHHHHCCCeEEEEECCChHHHHHHHHhccChhhheeeEEE
Confidence            554433578999999999999999999999999888766655 5 666655554443

>1zrn_A L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseudomonas SP} SCOP: c.108.1.1 PDB: 1zrm_A 1jud_A 1qh9_A

Probab=99.38  E-value=3.2e-12  Score=102.78  Aligned_cols=123  Identities=12%  Similarity=0.093  Sum_probs=74.4

Q ss_pred             cCCcEEEEECCCcccccchHHH-HHHHcCCCc-cHH----------HHHHHHhCCCCCHHHH----HHHHHhccC--CCH
Q 028799           81 RTADAVCFDVDSTVCVDEGIDE-LAEFCGAGK-AVA----------EWTARAMGGSVPFEEA----LAARLSLFK--PSL  142 (203)
Q Consensus        81 ~~~kaVIFD~DGTLiDse~~~~-la~~~G~~~-~~~----------~~~~~~~gG~~~~~e~----l~~~~~~~~--~~~  142 (203)
                      .++++|+|||||||+|++.... ..+.++... ...          .+.....++..++...    +...+....  ...
T Consensus         2 ~m~k~viFDlDGTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (232)
T 1zrn_A            2 DYIKGIAFDLYGTLFDVHSVVGRCDEAFPGRGREISALWRQKQLEYTWLRSLMNRYVNFQQATEDALRFTCRHLGLDLDA   81 (232)
T ss_dssp             -CCCEEEECSBTTTEETHHHHHHHHHHSTTTHHHHHHHHHHHHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHTCCCCH
T ss_pred             CCceEEEEecCCcccCchhhHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHcCCCCCH
Confidence            3679999999999999886432 333333110 000          0112222222332211    111111111  122


Q ss_pred             HHHHHHHHh-CCCCCCCcHHHHHHHHHHCCCeEEEEcCCCHHHHHHHH-HcCCCccceEEecC
Q 028799          143 SQVQDFLEK-RPPRLSPGIDELVKKLKANNKNVYLISGGFRHMINILN-ILKWDVLKVIQITS  203 (203)
Q Consensus       143 e~l~~~~~~-~~~~l~PG~~elL~~Lk~~G~~vaIVTn~~~~~i~~ll-~lGL~~~~~i~it~  203 (203)
                      +....+... ....++||+.++|+.|+++|++++|+||++...++.++ .+|+..++...+++
T Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f~~~~~~  144 (232)
T 1zrn_A           82 RTRSTLCDAYLRLAPFSEVPDSLRELKRRGLKLAILSNGSPQSIDAVVSHAGLRDGFDHLLSV  144 (232)
T ss_dssp             HHHHHHHHGGGGCEECTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGCSEEEES
T ss_pred             HHHHHHHHHHccCCCCccHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHhcChHhhhheEEEe
Confidence            333333322 13578999999999999999999999999999999999 99998877666553

>2hdo_A Phosphoglycolate phosphatase; NP_784602.1, structur genomics, PSI-2, protein structure initiative, joint center structural genomics; HET: MSE; 1.50A {Lactobacillus plantarum} SCOP: c.108.1.6

Probab=99.36  E-value=1.7e-12  Score=102.97  Aligned_cols=117  Identities=16%  Similarity=0.242  Sum_probs=79.0

Q ss_pred             CCcEEEEECCCcccccch-----HHHHHHHcCCCccHHHHHHHHhCCCCCHHHHHHHHHhccCCCH-HHHHHHHHh----
Q 028799           82 TADAVCFDVDSTVCVDEG-----IDELAEFCGAGKAVAEWTARAMGGSVPFEEALAARLSLFKPSL-SQVQDFLEK----  151 (203)
Q Consensus        82 ~~kaVIFD~DGTLiDse~-----~~~la~~~G~~~~~~~~~~~~~gG~~~~~e~l~~~~~~~~~~~-e~l~~~~~~----  151 (203)
                      ++++|+|||||||+|++.     +...++.+|..... +......+  .+..+.+.. ++...... +.+.+++..    
T Consensus         3 ~~k~iifDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~g--~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~   78 (209)
T 2hdo_A            3 TYQALMFDIDGTLTNSQPAYTTVMREVLATYGKPFSP-AQAQKTFP--MAAEQAMTE-LGIAASEFDHFQAQYEDVMASH   78 (209)
T ss_dssp             CCSEEEECSBTTTEECHHHHHHHHHHHHHTTTCCCCH-HHHHHHTT--SCHHHHHHH-TTCCGGGHHHHHHHHHHHHTTC
T ss_pred             cccEEEEcCCCCCcCCHHHHHHHHHHHHHHhCCCCCH-HHHHHHcC--CcHHHHHHH-cCCCHHHHHHHHHHHHHHHhhh
Confidence            578999999999999975     33445567764333 33344444  455444433 22110111 122233221    


Q ss_pred             -CCCCCCCcHHHHHHHHHHCCCeEEEEcCCCHHHHHHHH-HcCCCccceEEecC
Q 028799          152 -RPPRLSPGIDELVKKLKANNKNVYLISGGFRHMINILN-ILKWDVLKVIQITS  203 (203)
Q Consensus       152 -~~~~l~PG~~elL~~Lk~~G~~vaIVTn~~~~~i~~ll-~lGL~~~~~i~it~  203 (203)
                       ....++||+.++|+.|+++ ++++|+||++...++.++ .+|+..++...+++
T Consensus        79 ~~~~~~~~~~~~~l~~l~~~-~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~  131 (209)
T 2hdo_A           79 YDQIELYPGITSLFEQLPSE-LRLGIVTSQRRNELESGMRSYPFMMRMAVTISA  131 (209)
T ss_dssp             GGGCEECTTHHHHHHHSCTT-SEEEEECSSCHHHHHHHHTTSGGGGGEEEEECG
T ss_pred             cccCCcCCCHHHHHHHHHhc-CcEEEEeCCCHHHHHHHHHHcChHhhccEEEec
Confidence             2367999999999999999 999999999999999999 99998887776653

>2hcf_A Hydrolase, haloacid dehalogenase-like family; NP_662590.1, ST genomics, PSI-2, protein structure initiative; 1.80A {Chlorobaculum tepidum} SCOP: c.108.1.6

Probab=99.36  E-value=1.7e-12  Score=103.97  Aligned_cols=117  Identities=16%  Similarity=0.107  Sum_probs=74.4

Q ss_pred             CCcEEEEECCCcccccchH-----HHHHHH-cCCCccHHHHHHHHhCCCCCHHHHHHHHHhccCCC----HHHH------
Q 028799           82 TADAVCFDVDSTVCVDEGI-----DELAEF-CGAGKAVAEWTARAMGGSVPFEEALAARLSLFKPS----LSQV------  145 (203)
Q Consensus        82 ~~kaVIFD~DGTLiDse~~-----~~la~~-~G~~~~~~~~~~~~~gG~~~~~e~l~~~~~~~~~~----~e~l------  145 (203)
                      ++++|+|||||||+|++..     ....+. +|....  ....... | .+..+.+...+..+...    .+.+      
T Consensus         3 ~~k~iifDlDGTL~d~~~~~~~~~~~~~~~~~g~~~~--~~~~~~~-g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (234)
T 2hcf_A            3 SRTLVLFDIDGTLLKVESMNRRVLADALIEVYGTEGS--TGSHDFS-G-KMDGAIIYEVLSNVGLERAEIADKFDKAKET   78 (234)
T ss_dssp             CCEEEEECCBTTTEEECTHHHHHHHHHHHHHHSCCCC--C---CCT-T-CCHHHHHHHHHHTTTCCHHHHHHHHHHHHHH
T ss_pred             cceEEEEcCCCCcccCccchHHHHHHHHHHHhCCCCc--cchhhhc-C-CChHHHHHHHHHHcCCCcccchhHHHHHHHH
Confidence            5799999999999999752     233444 576533  1111222 2 23333333333322111    1111      


Q ss_pred             -HHHHHh----CCCCCCCcHHHHHHHHHHC-CCeEEEEcCCCHHHHHHHH-HcCCCccceEEec
Q 028799          146 -QDFLEK----RPPRLSPGIDELVKKLKAN-NKNVYLISGGFRHMINILN-ILKWDVLKVIQIT  202 (203)
Q Consensus       146 -~~~~~~----~~~~l~PG~~elL~~Lk~~-G~~vaIVTn~~~~~i~~ll-~lGL~~~~~i~it  202 (203)
                       .+.+.+    ....++||+.++|+.|+++ |++++|+||++...++..+ .+|+..++...++
T Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f~~~~~  142 (234)
T 2hcf_A           79 YIALFRERARREDITLLEGVRELLDALSSRSDVLLGLLTGNFEASGRHKLKLPGIDHYFPFGAF  142 (234)
T ss_dssp             HHHHHHHHCCGGGEEECTTHHHHHHHHHTCTTEEEEEECSSCHHHHHHHHHTTTCSTTCSCEEC
T ss_pred             HHHHHHHHhccCCCCcCCCHHHHHHHHHhCCCceEEEEcCCcHHHHHHHHHHCCchhhcCccee
Confidence             112221    2357899999999999999 9999999999999999989 9999887765544

>2no4_A (S)-2-haloacid dehalogenase IVA; HAD superfamily, rossman fold, hydrol; 1.93A {Burkholderia cepacia} PDB: 2no5_A*

Probab=99.36  E-value=3.7e-12  Score=103.25  Aligned_cols=49  Identities=22%  Similarity=0.192  Sum_probs=44.7

Q ss_pred             CCCCCcHHHHHHHHHHCCCeEEEEcCCCHHHHHHHH-HcCCCccceEEec
Q 028799          154 PRLSPGIDELVKKLKANNKNVYLISGGFRHMINILN-ILKWDVLKVIQIT  202 (203)
Q Consensus       154 ~~l~PG~~elL~~Lk~~G~~vaIVTn~~~~~i~~ll-~lGL~~~~~i~it  202 (203)
                      ..++||+.++|+.|+++|++++|+||++...++.++ .+|+..++...++
T Consensus       104 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~~~  153 (240)
T 2no4_A          104 LSAYPDAAETLEKLKSAGYIVAILSNGNDEMLQAALKASKLDRVLDSCLS  153 (240)
T ss_dssp             CCBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGCSEEEE
T ss_pred             CCCCCCHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHhcCcHHHcCEEEE
Confidence            689999999999999999999999999999999999 9999887766654

>2hoq_A Putative HAD-hydrolase PH1655; haloacid dehalogenase, structural genomics, NPPSFA, national on protein structural and functional analyses; 1.70A {Pyrococcus horikoshii}

Probab=99.35  E-value=2.4e-12  Score=104.63  Aligned_cols=121  Identities=16%  Similarity=0.031  Sum_probs=73.6

Q ss_pred             CCcEEEEECCCcccccch-----HHHHHHHc---CCCccHHHHHHHHhCCCC----CHHHHHHHHHhccCC--CH---HH
Q 028799           82 TADAVCFDVDSTVCVDEG-----IDELAEFC---GAGKAVAEWTARAMGGSV----PFEEALAARLSLFKP--SL---SQ  144 (203)
Q Consensus        82 ~~kaVIFD~DGTLiDse~-----~~~la~~~---G~~~~~~~~~~~~~gG~~----~~~e~l~~~~~~~~~--~~---e~  144 (203)
                      |+++|+|||||||+|++.     +..+.+.+   |...........+..|..    ...+.+...+..+.+  ..   +.
T Consensus         1 m~k~iiFDlDGTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (241)
T 2hoq_A            1 MVKVIFFDLDDTLVDTSKLAEIARKNAIENMIRHGLPVDFETAYSELIELIKEYGSNFPYHFDYLLRRLDLPYNPKWISA   80 (241)
T ss_dssp             CCCEEEECSBTTTBCHHHHHHHHHHHHHHHHHHTTCCSCHHHHHHHHHHHHHHHCTTCTTHHHHHHHHTTCCCCHHHHHH
T ss_pred             CccEEEEcCCCCCCCChhhHHHHHHHHHHHHHHccccccHHHHHHHHHHhhcccchhHHHHHHHHHHHhcCCccchHHHH
Confidence            478999999999999875     23334443   333222233332221110    001112221221101  11   22


Q ss_pred             HHHHHHh---CCCCCCCcHHHHHHHHHHCCCeEEEEcCCCHHHHHHHH-HcCCCccceEEec
Q 028799          145 VQDFLEK---RPPRLSPGIDELVKKLKANNKNVYLISGGFRHMINILN-ILKWDVLKVIQIT  202 (203)
Q Consensus       145 l~~~~~~---~~~~l~PG~~elL~~Lk~~G~~vaIVTn~~~~~i~~ll-~lGL~~~~~i~it  202 (203)
                      +.+.+.+   ....++||+.++|+.|+++|++++|+||+....++..+ .+|+..++...++
T Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f~~~~~  142 (241)
T 2hoq_A           81 GVIAYHNTKFAYLREVPGARKVLIRLKELGYELGIITDGNPVKQWEKILRLELDDFFEHVII  142 (241)
T ss_dssp             HHHHHHHHHHHHCCBCTTHHHHHHHHHHHTCEEEEEECSCHHHHHHHHHHTTCGGGCSEEEE
T ss_pred             HHHHHHHHHHhhCCCCccHHHHHHHHHHCCCEEEEEECCCchhHHHHHHHcCcHhhccEEEE
Confidence            2222221   12578999999999999999999999999999999999 9999887776665

>2fi1_A Hydrolase, haloacid dehalogenase-like family; structural genomics, haloacid dehalogenase-like F PSI, protein structure initiative; 1.40A {Streptococcus pneumoniae} SCOP: c.108.1.3

Probab=99.35  E-value=1.3e-11  Score=95.96  Aligned_cols=117  Identities=10%  Similarity=0.028  Sum_probs=73.6

Q ss_pred             CCcEEEEECCCcccccch-----HHHHHHHcCCCccHHHHHHHHhCCCCCHHHHHHHHHhccCCCHHHHHHHHHh--CCC
Q 028799           82 TADAVCFDVDSTVCVDEG-----IDELAEFCGAGKAVAEWTARAMGGSVPFEEALAARLSLFKPSLSQVQDFLEK--RPP  154 (203)
Q Consensus        82 ~~kaVIFD~DGTLiDse~-----~~~la~~~G~~~~~~~~~~~~~gG~~~~~e~l~~~~~~~~~~~e~l~~~~~~--~~~  154 (203)
                      ++++|+|||||||+|++.     +....+.+|.............+  .+..+.. ............+.+.+.+  ...
T Consensus         5 ~~k~i~fDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~--~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~   81 (190)
T 2fi1_A            5 KYHDYIWDLGGTLLDNYETSTAAFVETLALYGITQDHDSVYQALKV--STPFAIE-TFAPNLENFLEKYKENEARELEHP   81 (190)
T ss_dssp             CCSEEEECTBTTTBCHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHH--CHHHHHH-HHCTTCTTHHHHHHHHHHHHTTSC
T ss_pred             cccEEEEeCCCCcCCCHHHHHHHHHHHHHHhCCCCCHHHHHHHHcc--ccHHHHH-HHhhhHHHHHHHHHHHHHHhcCcC
Confidence            379999999999999874     34455677876443333332222  1222222 2111111111222222221  123


Q ss_pred             CCCCcHHHHHHHHHHCCCeEEEEcCCCHHHHHHHH-HcCCCccceEEec
Q 028799          155 RLSPGIDELVKKLKANNKNVYLISGGFRHMINILN-ILKWDVLKVIQIT  202 (203)
Q Consensus       155 ~l~PG~~elL~~Lk~~G~~vaIVTn~~~~~i~~ll-~lGL~~~~~i~it  202 (203)
                      .++||+.++++.|+++|++++++||+.. .++..+ .+|+..++...++
T Consensus        82 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~-~~~~~l~~~~~~~~f~~~~~  129 (190)
T 2fi1_A           82 ILFEGVSDLLEDISNQGGRHFLVSHRND-QVLEILEKTSIAAYFTEVVT  129 (190)
T ss_dssp             CBCTTHHHHHHHHHHTTCEEEEECSSCT-HHHHHHHHTTCGGGEEEEEC
T ss_pred             ccCcCHHHHHHHHHHCCCcEEEEECCcH-HHHHHHHHcCCHhheeeeee
Confidence            4999999999999999999999999875 567778 9999888776665

>3um9_A Haloacid dehalogenase, type II; haloacid dehalogenase-like hydrolase protein superfamily, defluorinase, hydrolase; 2.19A {Polaromonas SP}

Probab=99.35  E-value=1.6e-11  Score=98.03  Aligned_cols=122  Identities=17%  Similarity=0.157  Sum_probs=76.8

Q ss_pred             cCCcEEEEECCCcccccchH-HHHHHHcCCC-ccHH----------HHHHHHhCCCCCHHHH----HHHHHhccC--CCH
Q 028799           81 RTADAVCFDVDSTVCVDEGI-DELAEFCGAG-KAVA----------EWTARAMGGSVPFEEA----LAARLSLFK--PSL  142 (203)
Q Consensus        81 ~~~kaVIFD~DGTLiDse~~-~~la~~~G~~-~~~~----------~~~~~~~gG~~~~~e~----l~~~~~~~~--~~~  142 (203)
                      .++++|+|||||||+|++.. ..+.+.++.. ....          .+.....+...++...    +........  .+.
T Consensus         3 ~~~k~i~fDlDGTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (230)
T 3um9_A            3 HAIKAVVFDLYGTLYDVYSVRTSCERIFPGQGEMVSKMWRQKQLEYTWMRTLMGQYQDFESATLDALRYTCGSLGLALDA   82 (230)
T ss_dssp             SSCCEEEECSBTTTBCGGGGHHHHHHHSTTCHHHHHHHHHHHHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHTCCCCH
T ss_pred             CCceEEEEcCCCCcCcchHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHhhccccCHHHHHHHHHHHHHHHcCCCCCH
Confidence            56899999999999998763 3344444322 1000          1122223332333222    222222111  133


Q ss_pred             HHHHHHHHh-CCCCCCCcHHHHHHHHHHCCCeEEEEcCCCHHHHHHHH-HcCCCccceEEec
Q 028799          143 SQVQDFLEK-RPPRLSPGIDELVKKLKANNKNVYLISGGFRHMINILN-ILKWDVLKVIQIT  202 (203)
Q Consensus       143 e~l~~~~~~-~~~~l~PG~~elL~~Lk~~G~~vaIVTn~~~~~i~~ll-~lGL~~~~~i~it  202 (203)
                      +....+... ....++||+.++++.|+++|++++|+||++...++.++ .+|+..++...++
T Consensus        83 ~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~~~  144 (230)
T 3um9_A           83 DGEAHLCSEYLSLTPFADVPQALQQLRAAGLKTAILSNGSRHSIRQVVGNSGLTNSFDHLIS  144 (230)
T ss_dssp             HHHHHHHHHTTSCCBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHTCGGGCSEEEE
T ss_pred             HHHHHHHHHHhcCCCCCCHHHHHHHHHhCCCeEEEEeCCCHHHHHHHHHHCCChhhcceeEe
Confidence            333333332 24689999999999999999999999999999999999 9999887766554

>3qnm_A Haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 1.70A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0

Probab=99.35  E-value=1.3e-11  Score=98.61  Aligned_cols=120  Identities=18%  Similarity=0.169  Sum_probs=79.1

Q ss_pred             CCcEEEEECCCcccccch-----HHHHHHHcCCCc---cHHHH-----------HHHHhCCCCCHHHHHH----HHHhcc
Q 028799           82 TADAVCFDVDSTVCVDEG-----IDELAEFCGAGK---AVAEW-----------TARAMGGSVPFEEALA----ARLSLF  138 (203)
Q Consensus        82 ~~kaVIFD~DGTLiDse~-----~~~la~~~G~~~---~~~~~-----------~~~~~gG~~~~~e~l~----~~~~~~  138 (203)
                      ++++|+||+||||+|++.     +..+++.+|...   .....           +..+..|.++..+...    ..+...
T Consensus         4 ~~k~i~fDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (240)
T 3qnm_A            4 KYKNLFFDLDDTIWAFSRNARDTFEEVYQKYSFDRYFDSFDHYYTLYQRRNTELWLEYGEGKVTKEELNRQRFFYPLQAV   83 (240)
T ss_dssp             CCSEEEECCBTTTBCHHHHHHHHHHHHHHHTTGGGTSSSHHHHHHHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHHHHHT
T ss_pred             CceEEEEcCCCCCcCchhhHHHHHHHHHHHcCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHc
Confidence            689999999999999875     334556677653   22222           2233445565544322    222222


Q ss_pred             CC-CHH---HHHHHHHh---CCCCCCCcHHHHHHHHHHCCCeEEEEcCCCHHHHHHHH-HcCCCccceEEec
Q 028799          139 KP-SLS---QVQDFLEK---RPPRLSPGIDELVKKLKANNKNVYLISGGFRHMINILN-ILKWDVLKVIQIT  202 (203)
Q Consensus       139 ~~-~~e---~l~~~~~~---~~~~l~PG~~elL~~Lk~~G~~vaIVTn~~~~~i~~ll-~lGL~~~~~i~it  202 (203)
                      .. ..+   .+.+.+.+   ....++||+.++|+.|+ +|++++|+||++...++..+ .+|+..++...++
T Consensus        84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~-~g~~~~i~sn~~~~~~~~~l~~~~l~~~f~~~~~  154 (240)
T 3qnm_A           84 GVEDEALAERFSEDFFAIIPTKSGLMPHAKEVLEYLA-PQYNLYILSNGFRELQSRKMRSAGVDRYFKKIIL  154 (240)
T ss_dssp             TCCCHHHHHHHHHHHHHHGGGCCCBSTTHHHHHHHHT-TTSEEEEEECSCHHHHHHHHHHHTCGGGCSEEEE
T ss_pred             CCCcHHHHHHHHHHHHHHhhhcCCcCccHHHHHHHHH-cCCeEEEEeCCchHHHHHHHHHcChHhhceeEEE
Confidence            11 222   22222211   23689999999999999 99999999999999999999 9999887766654

>4dcc_A Putative haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 1.65A {Bacteroides thetaiotaomicron} PDB: 4dfd_A 4f71_A 4f72_A

Probab=99.35  E-value=7.9e-12  Score=100.98  Aligned_cols=120  Identities=13%  Similarity=-0.031  Sum_probs=81.0

Q ss_pred             CCcEEEEECCCcccccch--HHHHHHHcCCCccH--------HHHHHHHhCCCCCHHHHHHHHHhccC--CCHHHHHHHH
Q 028799           82 TADAVCFDVDSTVCVDEG--IDELAEFCGAGKAV--------AEWTARAMGGSVPFEEALAARLSLFK--PSLSQVQDFL  149 (203)
Q Consensus        82 ~~kaVIFD~DGTLiDse~--~~~la~~~G~~~~~--------~~~~~~~~gG~~~~~e~l~~~~~~~~--~~~e~l~~~~  149 (203)
                      ++++|+||+||||+|++.  +....+.+|.....        ...+..+..|.++..+..........  .+.+++.+.+
T Consensus        27 ~ik~viFD~DGTL~d~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  106 (229)
T 4dcc_A           27 GIKNLLIDLGGVLINLDRERCIENFKKIGFQNIEEKFCTHQLDGIFLQQEKGLITPAEFRDGIREMMGKMVSDKQIDAAW  106 (229)
T ss_dssp             CCCEEEECSBTTTBCBCHHHHHHHHHHHTCTTHHHHHHHTHHHHHHHHHHTTCSCHHHHHHHHHHHHTSCCCHHHHHHHH
T ss_pred             CCCEEEEeCCCeEEeCChHHHHHHHHHhCCCcHHHHHHHhcCcHHHHHHHCCCCCHHHHHHHHHHHhCCCCCHHHHHHHH
Confidence            479999999999999875  33444566765221        11333445566676665544333322  2566777777


Q ss_pred             HhCCCCCCCcHHHHHHHHHHCCCeEEEEcCCCHHHHHHHH-H------cCCCccceEEec
Q 028799          150 EKRPPRLSPGIDELVKKLKANNKNVYLISGGFRHMINILN-I------LKWDVLKVIQIT  202 (203)
Q Consensus       150 ~~~~~~l~PG~~elL~~Lk~~G~~vaIVTn~~~~~i~~ll-~------lGL~~~~~i~it  202 (203)
                      ......++||+.++|+.|+++ ++++|+||++...++.++ .      +|+..++...++
T Consensus       107 ~~~~~~~~~~~~~~l~~l~~~-~~~~i~Sn~~~~~~~~~~~~l~~~~~~~l~~~fd~i~~  165 (229)
T 4dcc_A          107 NSFLVDIPTYKLDLLLKLREK-YVVYLLSNTNDIHWKWVCKNAFPYRTFKVEDYFEKTYL  165 (229)
T ss_dssp             HTTBCCCCHHHHHHHHHHTTT-SEEEEEECCCHHHHHHHHHHTSCBTTBCHHHHCSEEEE
T ss_pred             HHHHHhccHHHHHHHHHHHhc-CcEEEEECCChHHHHHHHhhhhhhccCCHHHhCCEEEe
Confidence            654346789999999999998 999999999999887655 3      456555554443

>3m9l_A Hydrolase, haloacid dehalogenase-like family; HAD family hydrolase, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Pseudomonas fluorescens} PDB: 2ybd_A* 3r09_A*

Probab=99.35  E-value=1.3e-12  Score=103.69  Aligned_cols=113  Identities=16%  Similarity=0.176  Sum_probs=73.7

Q ss_pred             cCCcEEEEECCCcccccch-HHHHHHHcCCCccHHHHHHHHhCCCCCHHHHHHHHHhccCCCHHHHHHHHHhCCCCCCCc
Q 028799           81 RTADAVCFDVDSTVCVDEG-IDELAEFCGAGKAVAEWTARAMGGSVPFEEALAARLSLFKPSLSQVQDFLEKRPPRLSPG  159 (203)
Q Consensus        81 ~~~kaVIFD~DGTLiDse~-~~~la~~~G~~~~~~~~~~~~~gG~~~~~e~l~~~~~~~~~~~e~l~~~~~~~~~~l~PG  159 (203)
                      .++++|+|||||||+|+.. +..+++.+|.... ........+  ++...  ......   ..+.+.+.+.. ...++||
T Consensus         4 ~~~k~iifDlDGTL~d~~~~~~~~~~~~g~~~~-~~~~~~~~~--~~~~~--~~~~~~---~~~~~~~~~~~-~~~~~~~   74 (205)
T 3m9l_A            4 SEIKHWVFDMDGTLTIAVHDFAAIREALSIPAE-DDILTHLAA--LPADE--SAAKHA---WLLEHERDLAQ-GSRPAPG   74 (205)
T ss_dssp             GGCCEEEECTBTTTEEEEECHHHHHHHTTCCTT-SCHHHHHHH--SCHHH--HHHHHH---HHHHTHHHHEE-EEEECTT
T ss_pred             ccCCEEEEeCCCcCcccHHHHHHHHHHhCCCch-HHHHHHHhc--CChHH--HHHHHH---HHHHHHHHHhh-cCCCCcc
Confidence            4689999999999999864 6777778887632 111111111  11110  000000   00111111112 3579999


Q ss_pred             HHHHHHHHHHCCCeEEEEcCCCHHHHHHHH-HcCCCccc--eEEec
Q 028799          160 IDELVKKLKANNKNVYLISGGFRHMINILN-ILKWDVLK--VIQIT  202 (203)
Q Consensus       160 ~~elL~~Lk~~G~~vaIVTn~~~~~i~~ll-~lGL~~~~--~i~it  202 (203)
                      +.++|+.|+++|++++|+||++...++.++ .+|+..++  ..+++
T Consensus        75 ~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~~i~~  120 (205)
T 3m9l_A           75 AVELVRELAGRGYRLGILTRNARELAHVTLEAIGLADCFAEADVLG  120 (205)
T ss_dssp             HHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGSCGGGEEC
T ss_pred             HHHHHHHHHhcCCeEEEEeCCchHHHHHHHHHcCchhhcCcceEEe
Confidence            999999999999999999999999999999 99998777  44443

>2om6_A Probable phosphoserine phosphatase; rossmann fold, B-hairpin, four-helix bundle, structural GENO NPPSFA; 2.20A {Pyrococcus horikoshii}

Probab=99.33  E-value=1.1e-11  Score=98.84  Aligned_cols=120  Identities=15%  Similarity=0.050  Sum_probs=74.3

Q ss_pred             CCcEEEEECCCcccccch-----HHHHHHHcCCCccHHH---H-------HHHHh-CCCCCHH---HHHHHHHhccCCCH
Q 028799           82 TADAVCFDVDSTVCVDEG-----IDELAEFCGAGKAVAE---W-------TARAM-GGSVPFE---EALAARLSLFKPSL  142 (203)
Q Consensus        82 ~~kaVIFD~DGTLiDse~-----~~~la~~~G~~~~~~~---~-------~~~~~-gG~~~~~---e~l~~~~~~~~~~~  142 (203)
                      ++++|+|||||||+|++.     +..+.+.+|.......   +       +..+. +| .+..   +.+...........
T Consensus         3 m~k~i~fDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g-~~~~~~~~~~~~~~~~~~~~~   81 (235)
T 2om6_A            3 EVKLVTFDVWNTLLDLNIMLDEFSHQLAKISGLHIKDVANAVIEVRNEIKKMRAQASE-DPRKVLTGSQEALAGKLKVDV   81 (235)
T ss_dssp             CCCEEEECCBTTTBCHHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHTTCC-CTTTHHHHHHHHHHHHHTCCH
T ss_pred             CceEEEEeCCCCCCCcchhHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHhhhhcC-CCcchHHHHHHHHHHHhCCCH
Confidence            579999999999999875     2345556776532111   1       11112 12 2222   22222222111122


Q ss_pred             HH---H-HHHHHhC-CCCCCCcHHHHHHHHHHCCCeEEEEcCCC---HHHHHHHH-HcCCCccceEEec
Q 028799          143 SQ---V-QDFLEKR-PPRLSPGIDELVKKLKANNKNVYLISGGF---RHMINILN-ILKWDVLKVIQIT  202 (203)
Q Consensus       143 e~---l-~~~~~~~-~~~l~PG~~elL~~Lk~~G~~vaIVTn~~---~~~i~~ll-~lGL~~~~~i~it  202 (203)
                      ..   + ..+.... ...++||+.++|+.|+++|++++|+||+.   ...++..+ .+|+..++...++
T Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~~~~l~~~~l~~~f~~~~~  150 (235)
T 2om6_A           82 ELVKRATARAILNVDESLVLEGTKEALQFVKERGLKTAVIGNVMFWPGSYTRLLLERFGLMEFIDKTFF  150 (235)
T ss_dssp             HHHHHHHHHHHHHCCGGGBCTTHHHHHHHHHHTTCEEEEEECCCSSCHHHHHHHHHHTTCGGGCSEEEE
T ss_pred             HHHHHHHHHHHHhccccCcCccHHHHHHHHHHCCCEEEEEcCCcccchhHHHHHHHhCCcHHHhhhhee
Confidence            12   1 2222211 12469999999999999999999999999   88888888 9999887766654

>2gfh_A Haloacid dehalogenase-like hydrolase domain conta; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.90A {Mus musculus} SCOP: c.108.1.6 PDB: 2w4m_A

Probab=99.33  E-value=3.7e-12  Score=106.27  Aligned_cols=50  Identities=10%  Similarity=0.087  Sum_probs=44.3

Q ss_pred             CCCCCCcHHHHHHHHHHCCCeEEEEcCCCHHHHHHHH-HcCCCccceEEecC
Q 028799          153 PPRLSPGIDELVKKLKANNKNVYLISGGFRHMINILN-ILKWDVLKVIQITS  203 (203)
Q Consensus       153 ~~~l~PG~~elL~~Lk~~G~~vaIVTn~~~~~i~~ll-~lGL~~~~~i~it~  203 (203)
                      ..+++||+.++|+.|++ |++++|+||+++..++.++ .+|+..++..++++
T Consensus       119 ~~~~~~g~~~~L~~L~~-~~~l~i~Tn~~~~~~~~~l~~~gl~~~f~~i~~~  169 (260)
T 2gfh_A          119 HMILADDVKAMLTELRK-EVRLLLLTNGDRQTQREKIEACACQSYFDAIVIG  169 (260)
T ss_dssp             TCCCCHHHHHHHHHHHT-TSEEEEEECSCHHHHHHHHHHHTCGGGCSEEEEG
T ss_pred             cCCCCcCHHHHHHHHHc-CCcEEEEECcChHHHHHHHHhcCHHhhhheEEec
Confidence            36899999999999997 5999999999999999999 99999887776653

>3umb_A Dehalogenase-like hydrolase; 2.20A {Ralstonia solanacearum}

Probab=99.32  E-value=1.4e-11  Score=98.72  Aligned_cols=122  Identities=13%  Similarity=0.071  Sum_probs=75.1

Q ss_pred             cCCcEEEEECCCcccccchHHHHH-HHcCCC-ccHHH----------HHHHHh----CCCCCHHHHH----HHHHhccCC
Q 028799           81 RTADAVCFDVDSTVCVDEGIDELA-EFCGAG-KAVAE----------WTARAM----GGSVPFEEAL----AARLSLFKP  140 (203)
Q Consensus        81 ~~~kaVIFD~DGTLiDse~~~~la-~~~G~~-~~~~~----------~~~~~~----gG~~~~~e~l----~~~~~~~~~  140 (203)
                      .++++|+|||||||+|++.....+ +.++.. .....          ......    ++...+....    .........
T Consensus         2 ~~~k~i~FDlDGTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~   81 (233)
T 3umb_A            2 TSIRAVVFDAYGTLFDVYSVAARAEQLFPGKGEALSVLWRDRQIDYTRIRSLAGPSGEHYKPFWDVTVDALRYACARLNL   81 (233)
T ss_dssp             CCCCEEEECSBTTTEETHHHHHHHHHHSTTCHHHHHHHHHHHHHHHHHHHHHHCTTSTTCCCHHHHHHHHHHHHHHHTTC
T ss_pred             CCceEEEEeCCCcccccHHHHHHHHHHhccchhhhhHHHHhhhhHHHHHHHhcccccCCCCCHHHHHHHHHHHHHHHcCC
Confidence            468999999999999987543322 333221 11000          111112    3223333222    222222211


Q ss_pred             --CHHHHHHHHHh-CCCCCCCcHHHHHHHHHHCCCeEEEEcCCCHHHHHHHH-HcCCCccceEEec
Q 028799          141 --SLSQVQDFLEK-RPPRLSPGIDELVKKLKANNKNVYLISGGFRHMINILN-ILKWDVLKVIQIT  202 (203)
Q Consensus       141 --~~e~l~~~~~~-~~~~l~PG~~elL~~Lk~~G~~vaIVTn~~~~~i~~ll-~lGL~~~~~i~it  202 (203)
                        +.+....+.+. ....++||+.++|+.|+++|++++|+||++...++.++ .+|+..++...++
T Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f~~~~~  147 (233)
T 3umb_A           82 PLGNHAEATLMREYACLSAFPENVPVLRQLREMGLPLGILSNGNPQMLEIAVKSAGMSGLFDHVLS  147 (233)
T ss_dssp             CCCHHHHHHHHHHHHSCEECTTHHHHHHHHHTTTCCEEEEESSCHHHHHHHHHTTTCTTTCSEEEE
T ss_pred             CCCHHHHHHHHHHHhcCCCCCCHHHHHHHHHhCCCcEEEEeCCCHHHHHHHHHHCCcHhhcCEEEE
Confidence              23333333221 13689999999999999999999999999999999999 9999887766554

>2go7_A Hydrolase, haloacid dehalogenase-like family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.10A {Streptococcus pneumoniae} SCOP: c.108.1.6

Probab=99.31  E-value=9.5e-12  Score=96.70  Aligned_cols=118  Identities=13%  Similarity=0.036  Sum_probs=75.3

Q ss_pred             CCcEEEEECCCcccccch-----HHHHHHHcCCCccHHHHHHHHhCCCCCHHHHHHHHHhccCCCH---HHHHHHHHh--
Q 028799           82 TADAVCFDVDSTVCVDEG-----IDELAEFCGAGKAVAEWTARAMGGSVPFEEALAARLSLFKPSL---SQVQDFLEK--  151 (203)
Q Consensus        82 ~~kaVIFD~DGTLiDse~-----~~~la~~~G~~~~~~~~~~~~~gG~~~~~e~l~~~~~~~~~~~---e~l~~~~~~--  151 (203)
                      ++++|+|||||||+|++.     +..+.+.+|......... ...+ ..+..+.+........-+.   ..+...+.+  
T Consensus         3 ~~k~i~fDlDGTL~~~~~~~~~~~~~~~~~~g~~~~~~~~~-~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (207)
T 2go7_A            3 QKTAFIWDLDGTLLDSYEAILSGIEETFAQFSIPYDKEKVR-EFIF-KYSVQDLLVRVAEDRNLDVEVLNQVRAQSLAEK   80 (207)
T ss_dssp             -CCEEEECTBTTTEECHHHHHHHHHHHHHHHTCCCCHHHHH-HHHH-HSCHHHHHHHHHHHHTCCHHHHHHHHHHHHTTC
T ss_pred             cccEEEEeCCCcccccHHHHHHHHHHHHHHcCCCCCHHHHH-HHHc-cccHHHHHHHhhchhhccHHHHHHHHHHHHHhc
Confidence            579999999999999875     234556677654332222 2222 1233333332211111011   122233332  


Q ss_pred             -CCCCCCCcHHHHHHHHHHCCCeEEEEcCCCHHHHHHHH-HcCCCccceEEec
Q 028799          152 -RPPRLSPGIDELVKKLKANNKNVYLISGGFRHMINILN-ILKWDVLKVIQIT  202 (203)
Q Consensus       152 -~~~~l~PG~~elL~~Lk~~G~~vaIVTn~~~~~i~~ll-~lGL~~~~~i~it  202 (203)
                       ....++||+.++++.|+++|++++++||+....++ .+ .+|+..++...++
T Consensus        81 ~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~-~~~~~~~~~~f~~~~~  132 (207)
T 2go7_A           81 NAQVVLMPGAREVLAWADESGIQQFIYTHKGNNAFT-ILKDLGVESYFTEILT  132 (207)
T ss_dssp             GGGCEECTTHHHHHHHHHHTTCEEEEECSSCTHHHH-HHHHHTCGGGEEEEEC
T ss_pred             cccceeCcCHHHHHHHHHHCCCeEEEEeCCchHHHH-HHHHcCchhheeeEEe
Confidence             13578999999999999999999999999999888 88 8999887776654

>3nuq_A Protein SSM1, putative nucleotide phosphatase; suppresses the 6-AU sensitivity of transcription elongation II; 1.70A {Saccharomyces cerevisiae} PDB: 3onn_A 3opx_A*

Probab=99.30  E-value=1.9e-11  Score=101.85  Aligned_cols=121  Identities=9%  Similarity=0.071  Sum_probs=75.8

Q ss_pred             ccCCcEEEEECCCcccccch-----HHHHHHH-----cCCCccHH-HHHHHHhCCCCCHHHHHHHHHhccCCCHHHHHHH
Q 028799           80 WRTADAVCFDVDSTVCVDEG-----IDELAEF-----CGAGKAVA-EWTARAMGGSVPFEEALAARLSLFKPSLSQVQDF  148 (203)
Q Consensus        80 ~~~~kaVIFD~DGTLiDse~-----~~~la~~-----~G~~~~~~-~~~~~~~gG~~~~~e~l~~~~~~~~~~~e~l~~~  148 (203)
                      ..++++|+|||||||+|++.     .......     .|...... .....+..   .+...+.........+.+++.+.
T Consensus        54 ~~~~k~i~FDlDGTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~g~~~~~~~~~~~~~~~~~~~~  130 (282)
T 3nuq_A           54 NPNLKVFFFDIDNCLYKSSTRIHDLMQQSILRFFQTHLKLSPEDAHVLNNSYYK---EYGLAIRGLVMFHKVNALEYNRL  130 (282)
T ss_dssp             -CCCCEEEECCTTTTSCCCHHHHHHHHHHHHHHHHHCTTSCHHHHHHHHHHHHH---HTHHHHHHHHHTTSSCHHHHHHH
T ss_pred             CCCCCEEEEecCCCcccCCccHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHH---HHhhhHHHHHHHcCCCHHHHHHH
Confidence            56789999999999999853     1222222     35442211 11111000   00011111122121144555554


Q ss_pred             HHh-----CCCCCCCcHHHHHHHHHHCCC--eEEEEcCCCHHHHHHHH-HcCCCccceEEecC
Q 028799          149 LEK-----RPPRLSPGIDELVKKLKANNK--NVYLISGGFRHMINILN-ILKWDVLKVIQITS  203 (203)
Q Consensus       149 ~~~-----~~~~l~PG~~elL~~Lk~~G~--~vaIVTn~~~~~i~~ll-~lGL~~~~~i~it~  203 (203)
                      +..     ....++||+.++|+.|+++|+  +++|+||++...++.++ .+|+..++..++++
T Consensus       131 ~~~~~~~~~~~~~~p~~~~~L~~L~~~g~~~~l~i~Tn~~~~~~~~~l~~~gl~~~fd~v~~~  193 (282)
T 3nuq_A          131 VDDSLPLQDILKPDIPLRNMLLRLRQSGKIDKLWLFTNAYKNHAIRCLRLLGIADLFDGLTYC  193 (282)
T ss_dssp             HTTTSCGGGTCCCCHHHHHHHHHHHHSSSCSEEEEECSSCHHHHHHHHHHHTCTTSCSEEECC
T ss_pred             HhhhhhhhhccCcChhHHHHHHHHHhCCCCceEEEEECCChHHHHHHHHhCCcccccceEEEe
Confidence            432     136789999999999999999  99999999999999999 99998888777653

>3k1z_A Haloacid dehalogenase-like hydrolase domain-conta protein 3; HDHD3, haloacid dehalogenase-like hydrolase domain containin structural genomics; 1.55A {Homo sapiens}

Probab=99.30  E-value=1.2e-11  Score=102.50  Aligned_cols=118  Identities=11%  Similarity=0.039  Sum_probs=76.0

Q ss_pred             CcEEEEECCCcccccch-----HHHHHHHcCCCccHHHHHHHH----------------hCCCCCHHHH----HHHHHhc
Q 028799           83 ADAVCFDVDSTVCVDEG-----IDELAEFCGAGKAVAEWTARA----------------MGGSVPFEEA----LAARLSL  137 (203)
Q Consensus        83 ~kaVIFD~DGTLiDse~-----~~~la~~~G~~~~~~~~~~~~----------------~gG~~~~~e~----l~~~~~~  137 (203)
                      +++|+|||||||+|++.     +..+++.+|...........+                ..| .+..+.    +...+..
T Consensus         1 ik~iiFDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g-~~~~~~~~~~~~~~~~~   79 (263)
T 3k1z_A            1 MRLLTWDVKDTLLRLRHPLGEAYATKARAHGLEVEPSALEQGFRQAYRAQSHSFPNYGLSHG-LTSRQWWLDVVLQTFHL   79 (263)
T ss_dssp             CCEEEECCBTTTEEESSCHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHSTGGGGGGT-CCHHHHHHHHHHHHHHH
T ss_pred             CcEEEEcCCCceeCCCCCHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHhhhhccccccccC-CCHHHHHHHHHHHHHHH
Confidence            57999999999999763     556677788764322221111                122 333332    2233322


Q ss_pred             cCC-CHHH----HHHHHHhC----CCCCCCcHHHHHHHHHHCCCeEEEEcCCCHHHHHHHH-HcCCCccceEEec
Q 028799          138 FKP-SLSQ----VQDFLEKR----PPRLSPGIDELVKKLKANNKNVYLISGGFRHMINILN-ILKWDVLKVIQIT  202 (203)
Q Consensus       138 ~~~-~~e~----l~~~~~~~----~~~l~PG~~elL~~Lk~~G~~vaIVTn~~~~~i~~ll-~lGL~~~~~i~it  202 (203)
                      ... +.+.    ..+++...    ...++||+.++|+.|+++|++++|+||+... ++.++ .+|+..++..+++
T Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~tn~~~~-~~~~l~~~gl~~~f~~~~~  153 (263)
T 3k1z_A           80 AGVQDAQAVAPIAEQLYKDFSHPCTWQVLDGAEDTLRECRTRGLRLAVISNFDRR-LEGILGGLGLREHFDFVLT  153 (263)
T ss_dssp             TTCCCHHHHHHHHHHHHHHTTSGGGEEECTTHHHHHHHHHHTTCEEEEEESCCTT-HHHHHHHTTCGGGCSCEEE
T ss_pred             cCCCCHHHHHHHHHHHHHHhcCcccceECcCHHHHHHHHHhCCCcEEEEeCCcHH-HHHHHHhCCcHHhhhEEEe
Confidence            211 3333    23334322    2479999999999999999999999998875 57788 9999887776655

>3iru_A Phoshonoacetaldehyde hydrolase like protein; phosphonoacetaldehyde hydrolase like P structural genomics, PSI-2, protein structure initiative; 2.30A {Oleispira antarctica} SCOP: c.108.1.0

Probab=99.30  E-value=1.7e-11  Score=100.47  Aligned_cols=117  Identities=18%  Similarity=0.079  Sum_probs=74.0

Q ss_pred             cCCcEEEEECCCcccccch------HHHHHHHcCCCccHHHHHHHHhCCCCCHHHHH-------------HHHHhccCCC
Q 028799           81 RTADAVCFDVDSTVCVDEG------IDELAEFCGAGKAVAEWTARAMGGSVPFEEAL-------------AARLSLFKPS  141 (203)
Q Consensus        81 ~~~kaVIFD~DGTLiDse~------~~~la~~~G~~~~~~~~~~~~~gG~~~~~e~l-------------~~~~~~~~~~  141 (203)
                      .++++|+|||||||+|++.      +...++.+|...... ......+  ....+.+             ...++.. .+
T Consensus        12 ~~~k~i~fDlDGTL~d~~~~~~~~~~~~~~~~~g~~~~~~-~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~   87 (277)
T 3iru_A           12 GPVEALILDWAGTTIDFGSLAPVYAFMELFKQEGIEVTQA-EAREPMG--TEKSEHIRRMLGNSRIANAWLSIKGQA-SN   87 (277)
T ss_dssp             CCCCEEEEESBTTTBSTTCCHHHHHHHHHHHTTTCCCCHH-HHHTTTT--SCHHHHHHHHTTSHHHHHHHHHHHSSC-CC
T ss_pred             ccCcEEEEcCCCCcccCCcccHHHHHHHHHHHhCCCCCHH-HHHHHhc--CchHHHHHHhccchHHHHHHHHHhccC-CC
Confidence            4689999999999999754      234445567653322 2222222  2222221             1112111 12


Q ss_pred             HHHHHH-------H----HHhCCCCCCCcHHHHHHHHHHCCCeEEEEcCCCHHHHHHHH-HcCCCcc-ceEEec
Q 028799          142 LSQVQD-------F----LEKRPPRLSPGIDELVKKLKANNKNVYLISGGFRHMINILN-ILKWDVL-KVIQIT  202 (203)
Q Consensus       142 ~e~l~~-------~----~~~~~~~l~PG~~elL~~Lk~~G~~vaIVTn~~~~~i~~ll-~lGL~~~-~~i~it  202 (203)
                      .+.+.+       .    +.. ...++||+.++|+.|+++|++++|+||+....++.++ .+|+..+ +...++
T Consensus        88 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~l~~~g~~~~i~tn~~~~~~~~~l~~~~~~~~~~~~~~~  160 (277)
T 3iru_A           88 EEDIKRLYDLFAPIQTRIVAQ-RSQLIPGWKEVFDKLIAQGIKVGGNTGYGPGMMAPALIAAKEQGYTPASTVF  160 (277)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHH-TCCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHHHTTCCCSEEEC
T ss_pred             HHHHHHHHHHHHHHHHHHhhc-cCccCcCHHHHHHHHHHcCCeEEEEeCCchHHHHHHHHhcCcccCCCceEec
Confidence            222211       1    112 3689999999999999999999999999999999888 8888766 565554

>1qq5_A Protein (L-2-haloacid dehalogenase); hydrolase; 1.52A {Xanthobacter autotrophicus} SCOP: c.108.1.1 PDB: 1qq6_A* 1qq7_A* 1aq6_A

Probab=99.29  E-value=2.5e-11  Score=99.60  Aligned_cols=119  Identities=18%  Similarity=0.156  Sum_probs=73.5

Q ss_pred             CCcEEEEECCCcccccchHH-HHHHHcCCCc-cH----------HHHHHHHhCCCCCHHHH----HHHHHhccC--CCHH
Q 028799           82 TADAVCFDVDSTVCVDEGID-ELAEFCGAGK-AV----------AEWTARAMGGSVPFEEA----LAARLSLFK--PSLS  143 (203)
Q Consensus        82 ~~kaVIFD~DGTLiDse~~~-~la~~~G~~~-~~----------~~~~~~~~gG~~~~~e~----l~~~~~~~~--~~~e  143 (203)
                      |+++|+|||||||+|++... ...+.++... ..          ..+.....++...+...    +...+....  ...+
T Consensus         1 M~k~viFDlDGTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (253)
T 1qq5_A            1 MIKAVVFDAYGTLFDVQSVADATERAYPGRGEYITQVWRQKQLEYSWLRALMGRYADFWSVTREALAYTLGTLGLEPDES   80 (253)
T ss_dssp             CCCEEEECTBTTTBCTTTTHHHHHHHSTTCHHHHHHHHHHHHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHTTCCCCHH
T ss_pred             CCcEEEEeCCCCCCccHhhHHHHHHHHhhhhhHHHHHHHHhhhHHHHHHHHhcCcCcHHHHHHHHHHHHHHHhCCCCCHH
Confidence            47899999999999998643 3333333210 00          01122233333333222    222222221  1233


Q ss_pred             HHHHHHHhC-CCCCCCcHHHHHHHHHHCCCeEEEEcCCCHHHHHHHH-HcCCCccceEEec
Q 028799          144 QVQDFLEKR-PPRLSPGIDELVKKLKANNKNVYLISGGFRHMINILN-ILKWDVLKVIQIT  202 (203)
Q Consensus       144 ~l~~~~~~~-~~~l~PG~~elL~~Lk~~G~~vaIVTn~~~~~i~~ll-~lGL~~~~~i~it  202 (203)
                      ....+.+.. ...++||+.++|+.|+  |++++|+||++...++.++ .+|+..++...++
T Consensus        81 ~~~~~~~~~~~~~~~~~~~~~l~~l~--g~~~~i~t~~~~~~~~~~l~~~gl~~~f~~~~~  139 (253)
T 1qq5_A           81 FLADMAQAYNRLTPYPDAAQCLAELA--PLKRAILSNGAPDMLQALVANAGLTDSFDAVIS  139 (253)
T ss_dssp             HHHHHHGGGGSCCBCTTHHHHHHHHT--TSEEEEEESSCHHHHHHHHHHTTCGGGCSEEEE
T ss_pred             HHHHHHHHHhcCCCCccHHHHHHHHc--CCCEEEEeCcCHHHHHHHHHHCCchhhccEEEE
Confidence            333333321 3589999999999999  9999999999999999999 9999887766654

>1te2_A Putative phosphatase; structural genomics, phosphates, PSI, protein S initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.76A {Escherichia coli} SCOP: c.108.1.6

Probab=99.29  E-value=1.6e-11  Score=97.14  Aligned_cols=118  Identities=18%  Similarity=0.111  Sum_probs=76.0

Q ss_pred             CCcEEEEECCCcccccch-----HHHHHHHcCCCccHHHHHHHHhCCCCCHHHHHHHHHhcc--CC-CHHHH----HHH-
Q 028799           82 TADAVCFDVDSTVCVDEG-----IDELAEFCGAGKAVAEWTARAMGGSVPFEEALAARLSLF--KP-SLSQV----QDF-  148 (203)
Q Consensus        82 ~~kaVIFD~DGTLiDse~-----~~~la~~~G~~~~~~~~~~~~~gG~~~~~e~l~~~~~~~--~~-~~e~l----~~~-  148 (203)
                      ++++|+|||||||+|++.     +..+.+.+|......+......+  .+..+.+.......  .+ ..+.+    .+. 
T Consensus         8 ~~k~i~fDlDGTL~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (226)
T 1te2_A            8 QILAAIFDMDGLLIDSEPLWDRAELDVMASLGVDISRRNELPDTLG--LRIDMVVDLWYARQPWNGPSRQEVVERVIARA   85 (226)
T ss_dssp             CCCEEEECCBTTTBCCHHHHHHHHHHHHHHTTCCGGGGGGSCCCTT--CCHHHHHHHHHHHSCCSSSCHHHHHHHHHHHH
T ss_pred             CCCEEEECCCCCcCcCHHHHHHHHHHHHHHcCCCCChHHHHHHHhC--CCHHHHHHHHHHHcCCCccCHHHHHHHHHHHH
Confidence            589999999999999875     23455667765331111112222  23333333322211  11 22221    111 


Q ss_pred             ---HHhCCCCCCCcHHHHHHHHHHCCCeEEEEcCCCHHHHHHHH-HcCCCccceEEec
Q 028799          149 ---LEKRPPRLSPGIDELVKKLKANNKNVYLISGGFRHMINILN-ILKWDVLKVIQIT  202 (203)
Q Consensus       149 ---~~~~~~~l~PG~~elL~~Lk~~G~~vaIVTn~~~~~i~~ll-~lGL~~~~~i~it  202 (203)
                         +.. ...++||+.++++.|++.|++++++||+....++.++ .+|+..++...++
T Consensus        86 ~~~~~~-~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~~~~~~~~~~~  142 (226)
T 1te2_A           86 ISLVEE-TRPLLPGVREAVALCKEQGLLVGLASASPLHMLEKVLTMFDLRDSFDALAS  142 (226)
T ss_dssp             HHHHHH-HCCBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGCSEEEE
T ss_pred             HHHHhc-cCCcCccHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHhcCcHhhCcEEEe
Confidence               112 2578999999999999999999999999999999888 9999877666554

>3d6j_A Putative haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides fragilis nctc 9343}

Probab=99.28  E-value=1.6e-11  Score=96.99  Aligned_cols=119  Identities=18%  Similarity=0.130  Sum_probs=77.3

Q ss_pred             CCcEEEEECCCcccccch-----HHHHHHHcCCCccHHHHHHHHhCCCCCHHHHHHHHHhccCC-CHHH----HHHHHHh
Q 028799           82 TADAVCFDVDSTVCVDEG-----IDELAEFCGAGKAVAEWTARAMGGSVPFEEALAARLSLFKP-SLSQ----VQDFLEK  151 (203)
Q Consensus        82 ~~kaVIFD~DGTLiDse~-----~~~la~~~G~~~~~~~~~~~~~gG~~~~~e~l~~~~~~~~~-~~e~----l~~~~~~  151 (203)
                      ++++|+|||||||+|++.     +..+.+.+|......+......+  .+..+.+......... ....    +...+.+
T Consensus         5 ~~k~v~fDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (225)
T 3d6j_A            5 KYTVYLFDFDYTLADSSRGIVTCFRSVLERHGYTGITDDMIKRTIG--KTLEESFSILTGITDADQLESFRQEYSKEADI   82 (225)
T ss_dssp             CCSEEEECCBTTTEECHHHHHHHHHHHHHHTTCCCCCHHHHHTTTT--SCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCCCCCHHHHHHHHHHHHHHhCCCCCCHHHHHHHhC--CcHHHHHHHHcCCCCHHHHHHHHHHHHHHHHH
Confidence            479999999999999864     34455667765322233333333  3444444433322110 0111    1111211


Q ss_pred             ---CCCCCCCcHHHHHHHHHHCCCeEEEEcCCCHHHHHHHH-HcCCCccceEEec
Q 028799          152 ---RPPRLSPGIDELVKKLKANNKNVYLISGGFRHMINILN-ILKWDVLKVIQIT  202 (203)
Q Consensus       152 ---~~~~l~PG~~elL~~Lk~~G~~vaIVTn~~~~~i~~ll-~lGL~~~~~i~it  202 (203)
                         ....++||+.++++.|++.|++++++||+....++..+ .+|+..++...++
T Consensus        83 ~~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~~~~~~~~~~~~~~~~  137 (225)
T 3d6j_A           83 YMNANTILFPDTLPTLTHLKKQGIRIGIISTKYRFRILSFLRNHMPDDWFDIIIG  137 (225)
T ss_dssp             HTGGGCEECTTHHHHHHHHHHHTCEEEEECSSCHHHHHHHHHTSSCTTCCSEEEC
T ss_pred             hccccCccCcCHHHHHHHHHHCCCeEEEEECCCHHHHHHHHHHcCchhheeeeee
Confidence               13578999999999999999999999999999999888 9999877665554

>3ddh_A Putative haloacid dehalogenase-like family hydrol; hydrolase, HAD superfamily, ST genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides thetaiotaomicron}

Probab=99.28  E-value=5.7e-11  Score=94.15  Aligned_cols=50  Identities=18%  Similarity=0.048  Sum_probs=44.5

Q ss_pred             CCCCCCcHHHHHHHHHHCC-CeEEEEcCCCHHHHHHHH-HcCCCccceEEec
Q 028799          153 PPRLSPGIDELVKKLKANN-KNVYLISGGFRHMINILN-ILKWDVLKVIQIT  202 (203)
Q Consensus       153 ~~~l~PG~~elL~~Lk~~G-~~vaIVTn~~~~~i~~ll-~lGL~~~~~i~it  202 (203)
                      ...++||+.++++.|+++| ++++++||+....++.++ .+|+..++...++
T Consensus       103 ~~~~~~~~~~~l~~l~~~g~~~~~i~t~~~~~~~~~~l~~~~~~~~f~~~~~  154 (234)
T 3ddh_A          103 PIELLPGVKETLKTLKETGKYKLVVATKGDLLDQENKLERSGLSPYFDHIEV  154 (234)
T ss_dssp             CCCBCTTHHHHHHHHHHHCCCEEEEEEESCHHHHHHHHHHHTCGGGCSEEEE
T ss_pred             cCCcCccHHHHHHHHHhCCCeEEEEEeCCchHHHHHHHHHhCcHhhhheeee
Confidence            4689999999999999999 999999999999999988 9999877766554

>2wf7_A Beta-PGM, beta-phosphoglucomutase; transition state analogue, haloacid dehalogenase superfamily, isomerase, phosphotransferase; HET: G7P; 1.05A {Lactococcus lactis} PDB: 1o03_A* 1z4n_A* 1z4o_A* 1zol_A 2wf5_A* 2wf6_A* 1o08_A* 2wf8_A* 2wf9_A* 2wfa_A 2whe_A 1lvh_A* 3fm9_A

Probab=99.27  E-value=2.6e-11  Score=95.91  Aligned_cols=116  Identities=25%  Similarity=0.266  Sum_probs=73.3

Q ss_pred             CCcEEEEECCCcccccch-----HHHHHHHcCCC-ccHHHHHHHHhCCCCCHHHHHHHHHhccC--CCHHHH-------H
Q 028799           82 TADAVCFDVDSTVCVDEG-----IDELAEFCGAG-KAVAEWTARAMGGSVPFEEALAARLSLFK--PSLSQV-------Q  146 (203)
Q Consensus        82 ~~kaVIFD~DGTLiDse~-----~~~la~~~G~~-~~~~~~~~~~~gG~~~~~e~l~~~~~~~~--~~~e~l-------~  146 (203)
                      |+++|+|||||||+|++.     +....+.+|.. .. ......+.|  .+..+.+........  -+.+.+       .
T Consensus         1 m~k~i~fDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~g--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   77 (221)
T 2wf7_A            1 MFKAVLFDLDGVITDTAEYHFRAWKALAEEIGINGVD-RQFNEQLKG--VSREDSLQKILDLADKKVSAEEFKELAKRKN   77 (221)
T ss_dssp             CCCEEEECCBTTTBTHHHHHHHHHHHHHHHTTCCCCS-HHHHTTTTT--CCHHHHHHHHHHHTTCCCCHHHHHHHHHHHH
T ss_pred             CCcEEEECCCCcccCChHHHHHHHHHHHHHcCCCCCC-HHHHHHhCC--CCHHHHHHHHHHHhCCCCChHHHHHHHHHHH
Confidence            478999999999999875     34455667765 22 222222232  344444333332221  122221       1


Q ss_pred             HHHHh---C--CCCCCCcHHHHHHHHHHCCCeEEEEcCCCHHHHHHHH-HcCCCccceEEec
Q 028799          147 DFLEK---R--PPRLSPGIDELVKKLKANNKNVYLISGGFRHMINILN-ILKWDVLKVIQIT  202 (203)
Q Consensus       147 ~~~~~---~--~~~l~PG~~elL~~Lk~~G~~vaIVTn~~~~~i~~ll-~lGL~~~~~i~it  202 (203)
                      +.+..   .  ...++||+.++++.|++.|++++++||+  ..++.++ .+|+..++...++
T Consensus        78 ~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~t~~--~~~~~~l~~~~l~~~f~~~~~  137 (221)
T 2wf7_A           78 DNYVKMIQDVSPADVYPGILQLLKDLRSNKIKIALASAS--KNGPFLLERMNLTGYFDAIAD  137 (221)
T ss_dssp             HHHHHHGGGCCGGGBCTTHHHHHHHHHHTTCEEEECCCC--TTHHHHHHHTTCGGGCSEECC
T ss_pred             HHHHHHHhhccCCCCCCCHHHHHHHHHHCCCeEEEEcCc--HHHHHHHHHcChHHHcceEec
Confidence            22221   1  2468999999999999999999999998  4556777 8999887766655

>3smv_A S-(-)-azetidine-2-carboxylate hydrolase; haloacid dehalogenase superfamily, L-azetidine-2- carboxylate; HET: GOL; 1.38A {Pseudomonas}

Probab=99.26  E-value=6.3e-11  Score=94.46  Aligned_cols=119  Identities=18%  Similarity=0.094  Sum_probs=73.9

Q ss_pred             cCCcEEEEECCCcccccch-----HHHHHHHcCCCccHHHHHHHHhC---------CCCCHHHHHHHH----HhccCC--
Q 028799           81 RTADAVCFDVDSTVCVDEG-----IDELAEFCGAGKAVAEWTARAMG---------GSVPFEEALAAR----LSLFKP--  140 (203)
Q Consensus        81 ~~~kaVIFD~DGTLiDse~-----~~~la~~~G~~~~~~~~~~~~~g---------G~~~~~e~l~~~----~~~~~~--  140 (203)
                      .++++|+|||||||+|++.     +..+.+.+|...........+.+         +...+.+.....    ......  
T Consensus         4 ~~~k~i~fD~DGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (240)
T 3smv_A            4 TDFKALTFDCYGTLIDWETGIVNALQPLAKRTGKTFTSDELLEVFGRNESPQQTETPGALYQDILRAVYDRIAKEWGLEP   83 (240)
T ss_dssp             GGCSEEEECCBTTTBCHHHHHHHHTHHHHHHHTCCCCHHHHHHHHHHHHGGGCCSSCCSCHHHHHHHHHHHHHHHTTCCC
T ss_pred             ccceEEEEeCCCcCcCCchhHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhhCCCCChhHHHHHHHHHHHHHhCCCC
Confidence            4689999999999999874     34555667876543333333221         112333322222    221111  


Q ss_pred             CHHHHHHHHHh-CCCCCCCcHHHHHHHHHHCCCeEEEEcCCCHHHHHHHH-HcCCCccceEEec
Q 028799          141 SLSQVQDFLEK-RPPRLSPGIDELVKKLKANNKNVYLISGGFRHMINILN-ILKWDVLKVIQIT  202 (203)
Q Consensus       141 ~~e~l~~~~~~-~~~~l~PG~~elL~~Lk~~G~~vaIVTn~~~~~i~~ll-~lGL~~~~~i~it  202 (203)
                      ..+....+... ....++||+.++|+.|++ |++++|+||+....++..+ .  +..++..+++
T Consensus        84 ~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~-~~~~~i~tn~~~~~~~~~l~~--l~~~fd~i~~  144 (240)
T 3smv_A           84 DAAEREEFGTSVKNWPAFPDTVEALQYLKK-HYKLVILSNIDRNEFKLSNAK--LGVEFDHIIT  144 (240)
T ss_dssp             CHHHHHHHHTGGGGCCBCTTHHHHHHHHHH-HSEEEEEESSCHHHHHHHHTT--TCSCCSEEEE
T ss_pred             CHHHHHHHHHHHhcCCCCCcHHHHHHHHHh-CCeEEEEeCCChhHHHHHHHh--cCCccCEEEE
Confidence            22332222221 136899999999999999 8999999999999888888 6  4455555444

>1q92_A 5(3)-deoxyribonucleotidase; alpha-beta rossman fold, hydrolase; HET: DRM; 1.40A {Homo sapiens} SCOP: c.108.1.8 PDB: 1mh9_A* 1q91_A* 1z4m_A* 1z4i_A* 1z4j_A* 1z4l_A* 1z4k_A* 1z4p_X* 1z4q_A* 2jau_A* 2jaw_A* 3u19_A* 3u13_A 4e88_A

Probab=99.26  E-value=9e-13  Score=105.54  Aligned_cols=106  Identities=18%  Similarity=0.101  Sum_probs=64.9

Q ss_pred             cCCcEEEEECCCcccccchHHHH-HH-HcC-CC-ccHHHHHHHHhCCCCCHHHHHHHHHhccCCCHHHHHHHHHh----C
Q 028799           81 RTADAVCFDVDSTVCVDEGIDEL-AE-FCG-AG-KAVAEWTARAMGGSVPFEEALAARLSLFKPSLSQVQDFLEK----R  152 (203)
Q Consensus        81 ~~~kaVIFD~DGTLiDse~~~~l-a~-~~G-~~-~~~~~~~~~~~gG~~~~~e~l~~~~~~~~~~~e~l~~~~~~----~  152 (203)
                      +++++|+|||||||+|++..... .. .+. +. .....     ..| .+..+.+.. +.  ....+++.+.+.+    .
T Consensus         2 ~~~k~viFDlDGTL~Ds~~~~~~~~~~~~~~~~~~~~~~-----~~~-~~~~~~~~~-~~--~~~~~~~~~~~~~~~~~~   72 (197)
T 1q92_A            2 GRALRVLVDMDGVLADFEGGFLRKFRARFPDQPFIALED-----RRG-FWVSEQYGR-LR--PGLSEKAISIWESKNFFF   72 (197)
T ss_dssp             CCCEEEEECSBTTTBCHHHHHHHHHHHHCTTSCCCCGGG-----CCS-SCHHHHHHH-HS--TTHHHHHHHHHTSTTTTT
T ss_pred             CCceEEEEeCCCCCccCcHHHHHHHHHHHhcCCCCCHHH-----hcC-CcHHHHHHh-cC--HHHHHHHHHHHHhhhhhh
Confidence            35789999999999999864322 12 221 11 11111     112 244444332 11  1112333344432    1


Q ss_pred             CCCCCCcHHHHHHHHHHC-CCeEEEEcCCCHHHHHHHH-HcCCCc
Q 028799          153 PPRLSPGIDELVKKLKAN-NKNVYLISGGFRHMINILN-ILKWDV  195 (203)
Q Consensus       153 ~~~l~PG~~elL~~Lk~~-G~~vaIVTn~~~~~i~~ll-~lGL~~  195 (203)
                      ..+++||+.++|+.|+++ |++++|+||+++..++..+ ++|+..
T Consensus        73 ~~~~~~g~~e~L~~L~~~~g~~~~ivT~~~~~~~~~~l~~~~l~~  117 (197)
T 1q92_A           73 ELEPLPGAVEAVKEMASLQNTDVFICTSPIKMFKYCPYEKYAWVE  117 (197)
T ss_dssp             TCCBCTTHHHHHHHHHHSTTEEEEEEECCCSCCSSHHHHHHHHHH
T ss_pred             cCCcCcCHHHHHHHHHhcCCCeEEEEeCCccchHHHHHHHhchHH
Confidence            368999999999999999 9999999999987766666 666544

>3bwv_A Putative 5'(3')-deoxyribonucleotidase; NP_764060.1, deoxyribonucleotidase-like protein; HET: MSE; 1.55A {Staphylococcus epidermidis}

Probab=99.25  E-value=2.1e-11  Score=95.89  Aligned_cols=107  Identities=15%  Similarity=0.164  Sum_probs=62.5

Q ss_pred             CCcEEEEECCCcccccchHH--HHHHHcCCCccHHHHHHHHhCCCCCHHHHHHHHHhccCCCHHHHHHHHH-h---CCCC
Q 028799           82 TADAVCFDVDSTVCVDEGID--ELAEFCGAGKAVAEWTARAMGGSVPFEEALAARLSLFKPSLSQVQDFLE-K---RPPR  155 (203)
Q Consensus        82 ~~kaVIFD~DGTLiDse~~~--~la~~~G~~~~~~~~~~~~~gG~~~~~e~l~~~~~~~~~~~e~l~~~~~-~---~~~~  155 (203)
                      +.++|+|||||||+|++...  .+.+.+|.......+    . | .+..+.+    +.   ..+++.+++. .   ...+
T Consensus         3 m~~~viFD~DGtL~Ds~~~~~~~~~~~~g~~~~~~~~----~-g-~~~~~~~----~~---~~~~~~~~~~~~~~~~~~~   69 (180)
T 3bwv_A            3 TRQRIAIDMDEVLADTLGAVVKAVNERADLNIKMESL----N-G-KKLKHMI----PE---HEGLVMDILKEPGFFRNLD   69 (180)
T ss_dssp             CCCEEEEETBTTTBCHHHHHHHHHHHHSCCCCCGGGC----T-T-CCC---------------CHHHHHHHSTTGGGSCC
T ss_pred             cccEEEEeCCCcccccHHHHHHHHHHHhCCCCCHHHH----c-C-ccHHHHC----Cc---hHHHHHHHHhCcchhccCC
Confidence            45899999999999998743  233456764322111    1 2 2222221    10   1112223221 1   1468


Q ss_pred             CCCcHHHHHHHHHHCCCeEEEEcCC---CHH--HHHHHH--HcCCCccceEEec
Q 028799          156 LSPGIDELVKKLKANNKNVYLISGG---FRH--MINILN--ILKWDVLKVIQIT  202 (203)
Q Consensus       156 l~PG~~elL~~Lk~~G~~vaIVTn~---~~~--~i~~ll--~lGL~~~~~i~it  202 (203)
                      ++||+.++|+.|+++ ++++|+||+   +..  .....+  .+++..++.++++
T Consensus        70 ~~pg~~e~L~~L~~~-~~~~i~T~~~~~~~~~~~~~~~l~~~f~~~~~~~~i~~  122 (180)
T 3bwv_A           70 VMPHAQEVVKQLNEH-YDIYIATAAMDVPTSFHDKYEWLLEYFPFLDPQHFVFC  122 (180)
T ss_dssp             BCTTHHHHHHHHTTT-SEEEEEECC--CCSHHHHHHHHHHHHCTTSCGGGEEEC
T ss_pred             CCcCHHHHHHHHHhc-CCEEEEeCCCCcchHHHHHHHHHHHHcCCCCcccEEEe
Confidence            999999999999985 999999999   422  223444  4677666655554

>3u26_A PF00702 domain protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, unknown function; 1.59A {Pyrococcus horikoshii} SCOP: c.108.1.1 PDB: 1x42_A

Probab=99.24  E-value=4e-11  Score=95.83  Aligned_cols=48  Identities=23%  Similarity=0.127  Sum_probs=43.4

Q ss_pred             CCCCCcHHHHHHHHHHCCCeEEEEcCCCHHHHHHHH-HcCCCccceEEec
Q 028799          154 PRLSPGIDELVKKLKANNKNVYLISGGFRHMINILN-ILKWDVLKVIQIT  202 (203)
Q Consensus       154 ~~l~PG~~elL~~Lk~~G~~vaIVTn~~~~~i~~ll-~lGL~~~~~i~it  202 (203)
                      ..++||+.++|+.|++. ++++|+||+....++..+ .+|+..++...++
T Consensus        99 ~~~~~~~~~~l~~l~~~-~~~~i~t~~~~~~~~~~l~~~~~~~~f~~~~~  147 (234)
T 3u26_A           99 GELYPEVVEVLKSLKGK-YHVGMITDSDTEQAMAFLDALGIKDLFDSITT  147 (234)
T ss_dssp             CCBCTTHHHHHHHHTTT-SEEEEEESSCHHHHHHHHHHTTCGGGCSEEEE
T ss_pred             CCcCcCHHHHHHHHHhC-CcEEEEECCCHHHHHHHHHHcCcHHHcceeEe
Confidence            58999999999999999 999999999999999999 9999887766654

>2fdr_A Conserved hypothetical protein; SAD, structural genomics, agrobacter tumefaciens, HAD-superfamily hydrolase; 2.00A {Agrobacterium tumefaciens str} SCOP: c.108.1.6

Probab=99.21  E-value=8e-11  Score=93.77  Aligned_cols=115  Identities=18%  Similarity=0.186  Sum_probs=75.6

Q ss_pred             CCcEEEEECCCcccccchH-----HHHHHHcCCCccHHHHHHHHhCCCCCHHHHHHHHHhccC--CCH---HHHHHHHHh
Q 028799           82 TADAVCFDVDSTVCVDEGI-----DELAEFCGAGKAVAEWTARAMGGSVPFEEALAARLSLFK--PSL---SQVQDFLEK  151 (203)
Q Consensus        82 ~~kaVIFD~DGTLiDse~~-----~~la~~~G~~~~~~~~~~~~~gG~~~~~e~l~~~~~~~~--~~~---e~l~~~~~~  151 (203)
                      ++++|+|||||||+|++..     ....+.+|......+....+.+  .+..+.+........  ...   ..+.+.+.+
T Consensus         3 ~ik~i~fDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (229)
T 2fdr_A            3 GFDLIIFDCDGVLVDSEIIAAQVESRLLTEAGYPISVEEMGERFAG--MTWKNILLQVESEASIPLSASLLDKSEKLLDM   80 (229)
T ss_dssp             CCSEEEECSBTTTBCCHHHHHHHHHHHHHHTTCCCCHHHHHHHHTT--CCHHHHHHHHHHHHCCCCCTHHHHHHHHHHHH
T ss_pred             CccEEEEcCCCCcCccHHHHHHHHHHHHHHhCCCCCHHHHHHHHhC--CCHHHHHHHHHHHcCCCCCHHHHHHHHHHHHH
Confidence            5799999999999998752     3455677876543344455554  455544443332221  111   122222221


Q ss_pred             ---CCCCCCCcHHHHHHHHHHCCCeEEEEcCCCHHHHHHHH-HcCCCccc-eEEe
Q 028799          152 ---RPPRLSPGIDELVKKLKANNKNVYLISGGFRHMINILN-ILKWDVLK-VIQI  201 (203)
Q Consensus       152 ---~~~~l~PG~~elL~~Lk~~G~~vaIVTn~~~~~i~~ll-~lGL~~~~-~i~i  201 (203)
                         ....++||+.++++.|+.   +++|+||+....++.++ .+|+..++ ...+
T Consensus        81 ~~~~~~~~~~~~~~~l~~l~~---~~~i~s~~~~~~~~~~l~~~~l~~~~~~~~~  132 (229)
T 2fdr_A           81 RLERDVKIIDGVKFALSRLTT---PRCICSNSSSHRLDMMLTKVGLKPYFAPHIY  132 (229)
T ss_dssp             HHHHHCCBCTTHHHHHHHCCS---CEEEEESSCHHHHHHHHHHTTCGGGTTTCEE
T ss_pred             HhhcCCccCcCHHHHHHHhCC---CEEEEECCChhHHHHHHHhCChHHhccceEE
Confidence               135789999999998874   99999999999999988 99998766 5444

>2w43_A Hypothetical 2-haloalkanoic acid dehalogenase; hydrolase, metabolic process; HET: MES; 1.66A {Sulfolobus tokodaii} PDB: 2w11_A

Probab=99.20  E-value=6.3e-12  Score=99.42  Aligned_cols=56  Identities=9%  Similarity=-0.052  Sum_probs=46.2

Q ss_pred             HHHHHHHHhCCCCCCCcHHHHHHHHHHCCCeEEEEcCCCHHHHHHHH-HcCCCccceEEec
Q 028799          143 SQVQDFLEKRPPRLSPGIDELVKKLKANNKNVYLISGGFRHMINILN-ILKWDVLKVIQIT  202 (203)
Q Consensus       143 e~l~~~~~~~~~~l~PG~~elL~~Lk~~G~~vaIVTn~~~~~i~~ll-~lGL~~~~~i~it  202 (203)
                      +.+.+.+..  ..++||+.+ |+.|+++ ++++|+||++...++.++ .+|+..++...++
T Consensus        64 ~~~~~~~~~--~~~~~~~~~-l~~l~~~-~~~~i~t~~~~~~~~~~l~~~~l~~~f~~~~~  120 (201)
T 2w43_A           64 DEELNKWKN--LKAYEDTKY-LKEISEI-AEVYALSNGSINEVKQHLERNGLLRYFKGIFS  120 (201)
T ss_dssp             HHHHHHHHT--CEECGGGGG-HHHHHHH-SEEEEEESSCHHHHHHHHHHTTCGGGCSEEEE
T ss_pred             HHHHHhhcc--cccCCChHH-HHHHHhC-CeEEEEeCcCHHHHHHHHHHCCcHHhCcEEEe
Confidence            334444443  589999999 9999999 999999999999999999 9999887766654

>2i7d_A 5'(3')-deoxyribonucleotidase, cytosolic type; hydrolase; HET: DUR; 1.20A {Homo sapiens} PDB: 2jar_A* 2jao_A*

Probab=99.19  E-value=3.4e-12  Score=101.64  Aligned_cols=103  Identities=15%  Similarity=0.106  Sum_probs=63.8

Q ss_pred             CcEEEEECCCcccccchHHHH--HHHc-CCCccHHHHHHHHhCCCCCHHHHHHHHHhccCCCHHHHHHHHHhC----CCC
Q 028799           83 ADAVCFDVDSTVCVDEGIDEL--AEFC-GAGKAVAEWTARAMGGSVPFEEALAARLSLFKPSLSQVQDFLEKR----PPR  155 (203)
Q Consensus        83 ~kaVIFD~DGTLiDse~~~~l--a~~~-G~~~~~~~~~~~~~gG~~~~~e~l~~~~~~~~~~~e~l~~~~~~~----~~~  155 (203)
                      .++|+|||||||+|++.....  .+.+ |.+....+.    +.. ....+.+...   .....+.+.+.+.+.    ..+
T Consensus         2 ~k~viFDlDGTL~Ds~~~~~~~~~~~~~g~~~~~~~~----~~~-~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~   73 (193)
T 2i7d_A            2 SVRVLVDMDGVLADFEAGLLRGFRRRFPEEPHVPLEQ----RRG-FLAREQYRAL---RPDLADKVASVYEAPGFFLDLE   73 (193)
T ss_dssp             CEEEEECSBTTTBCHHHHHHHHHHHHSTTSCCCCGGG----CCS-SCHHHHHHHH---CTTHHHHHHHHHTSTTTTTTCC
T ss_pred             CcEEEEECCCcCccchhHHHHHHHHHhcCCCCCCHHH----HHH-hhHHHHHHHH---hHHHHHHHHHHHHhcCccccCc
Confidence            479999999999999763322  1222 543111111    111 1122222221   111223444444432    468


Q ss_pred             CCCcHHHHHHHHHHC-CCeEEEEcCCCHHHHHHHH-HcCC
Q 028799          156 LSPGIDELVKKLKAN-NKNVYLISGGFRHMINILN-ILKW  193 (203)
Q Consensus       156 l~PG~~elL~~Lk~~-G~~vaIVTn~~~~~i~~ll-~lGL  193 (203)
                      ++||+.++|+.|+++ |++++|+||++...++.++ .+|+
T Consensus        74 ~~~g~~e~L~~L~~~~g~~~~ivT~~~~~~~~~~l~~~gl  113 (193)
T 2i7d_A           74 PIPGALDAVREMNDLPDTQVFICTSPLLKYHHCVGEKYRW  113 (193)
T ss_dssp             BCTTHHHHHHHHHTSTTEEEEEEECCCSSCTTTHHHHHHH
T ss_pred             cCcCHHHHHHHHHhCCCCeEEEEeCCChhhHHHHHHHhCc
Confidence            999999999999999 9999999999988777777 7766

>1yns_A E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo sapiens} SCOP: c.108.1.22 PDB: 1zs9_A

Probab=99.18  E-value=8.2e-11  Score=98.56  Aligned_cols=50  Identities=16%  Similarity=0.100  Sum_probs=43.2

Q ss_pred             CCCCCCcHHHHHHHHHHCCCeEEEEcCCCHHHHHHHH-Hc---CCCccceEEec
Q 028799          153 PPRLSPGIDELVKKLKANNKNVYLISGGFRHMINILN-IL---KWDVLKVIQIT  202 (203)
Q Consensus       153 ~~~l~PG~~elL~~Lk~~G~~vaIVTn~~~~~i~~ll-~l---GL~~~~~i~it  202 (203)
                      ...++||+.++|+.|+++|++++|+||++...++.++ ++   |+..++..+++
T Consensus       128 ~~~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~l~~~~~~~l~~~fd~i~~  181 (261)
T 1yns_A          128 KAEFFADVVPAVRKWREAGMKVYIYSSGSVEAQKLLFGHSTEGDILELVDGHFD  181 (261)
T ss_dssp             CBCCCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHTBTTBCCGGGCSEEEC
T ss_pred             ccccCcCHHHHHHHHHhCCCeEEEEeCCCHHHHHHHHHhhcccChHhhccEEEe
Confidence            4689999999999999999999999999999888877 55   48887776665

>3umg_A Haloacid dehalogenase; defluorinase, hydrolase; 2.25A {Rhodococcus jostii}

Probab=99.18  E-value=2.5e-10  Score=91.87  Aligned_cols=113  Identities=16%  Similarity=0.072  Sum_probs=71.4

Q ss_pred             cCCcEEEEECCCcccccch-----HHHHHHHcCCCccHHHHHHHHhC-----------CC---CCHHH----HHHHHHhc
Q 028799           81 RTADAVCFDVDSTVCVDEG-----IDELAEFCGAGKAVAEWTARAMG-----------GS---VPFEE----ALAARLSL  137 (203)
Q Consensus        81 ~~~kaVIFD~DGTLiDse~-----~~~la~~~G~~~~~~~~~~~~~g-----------G~---~~~~e----~l~~~~~~  137 (203)
                      .++++|+|||||||+|++.     +..+.+.+|...........+.+           +.   .++.+    .+...+..
T Consensus        13 ~~~k~i~fDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   92 (254)
T 3umg_A           13 RNVRAVLFDTFGTVVDWRTGIATAVADYAARHQLEVDAVAFADRWRARYQPSMDAILSGAREFVTLDILHRENLDFVLRE   92 (254)
T ss_dssp             SBCCEEEECCBTTTBCHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHTTHHHHHHHHHTTSSCCCCHHHHHHHHHHHHHHH
T ss_pred             CCceEEEEeCCCceecCchHHHHHHHHHHHHhcCCCCHHHHHHHHHHhHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHH
Confidence            4589999999999999864     44556677876443333333222           11   11111    11111111


Q ss_pred             cCC-----CHHHHHHHHHh-CCCCCCCcHHHHHHHHHHCCCeEEEEcCCCHHHHHHHH-HcCCC
Q 028799          138 FKP-----SLSQVQDFLEK-RPPRLSPGIDELVKKLKANNKNVYLISGGFRHMINILN-ILKWD  194 (203)
Q Consensus       138 ~~~-----~~e~l~~~~~~-~~~~l~PG~~elL~~Lk~~G~~vaIVTn~~~~~i~~ll-~lGL~  194 (203)
                      ...     ..+....+... ....++||+.++|+.|++. ++++|+||+....++.++ .+|+.
T Consensus        93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~-~~~~i~t~~~~~~~~~~l~~~~~~  155 (254)
T 3umg_A           93 SGIDPTNHDSGELDELARAWHVLTPWPDSVPGLTAIKAE-YIIGPLSNGNTSLLLDMAKNAGIP  155 (254)
T ss_dssp             TTCCGGGSCHHHHHHHHGGGGSCCBCTTHHHHHHHHHHH-SEEEECSSSCHHHHHHHHHHHTCC
T ss_pred             hCCCcCcCCHHHHHHHHHHHhhCcCCcCHHHHHHHHHhC-CeEEEEeCCCHHHHHHHHHhCCCC
Confidence            111     22333333321 1367899999999999997 999999999999999988 88886

>2pke_A Haloacid delahogenase-like family hydrolase; NP_639141.1, ST genomics, joint center for structural genomics, JCSG; 1.81A {Xanthomonas campestris PV}

Probab=99.17  E-value=3.2e-10  Score=92.52  Aligned_cols=49  Identities=18%  Similarity=0.056  Sum_probs=43.0

Q ss_pred             CCCCCCcHHHHHHHHHHCCCeEEEEcCCCHHHHHHHH-HcCCCccceEEec
Q 028799          153 PPRLSPGIDELVKKLKANNKNVYLISGGFRHMINILN-ILKWDVLKVIQIT  202 (203)
Q Consensus       153 ~~~l~PG~~elL~~Lk~~G~~vaIVTn~~~~~i~~ll-~lGL~~~~~i~it  202 (203)
                      ...++||+.++|+.|+ +|++++|+||+....++..+ .+|+..++..+++
T Consensus       110 ~~~~~~~~~~~l~~l~-~~~~~~i~t~~~~~~~~~~l~~~~l~~~f~~i~~  159 (251)
T 2pke_A          110 PVEVIAGVREAVAAIA-ADYAVVLITKGDLFHQEQKIEQSGLSDLFPRIEV  159 (251)
T ss_dssp             CCCBCTTHHHHHHHHH-TTSEEEEEEESCHHHHHHHHHHHSGGGTCCCEEE
T ss_pred             cCCcCccHHHHHHHHH-CCCEEEEEeCCCHHHHHHHHHHcCcHHhCceeee
Confidence            4689999999999999 99999999999999888888 9999877665543

>2qlt_A (DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, saccharom cerevisiae, structural genomics, PSI-2, protein structure initiative; 1.60A {Saccharomyces cerevisiae}

Probab=99.15  E-value=7.5e-11  Score=98.49  Aligned_cols=111  Identities=20%  Similarity=0.148  Sum_probs=71.8

Q ss_pred             CCcEEEEECCCcccccch-----HHHHHHHcCCCccHHHHHHHHhCCCCCHHHHHHHHHhccCCCHHHH---HHHHH---
Q 028799           82 TADAVCFDVDSTVCVDEG-----IDELAEFCGAGKAVAEWTARAMGGSVPFEEALAARLSLFKPSLSQV---QDFLE---  150 (203)
Q Consensus        82 ~~kaVIFD~DGTLiDse~-----~~~la~~~G~~~~~~~~~~~~~gG~~~~~e~l~~~~~~~~~~~e~l---~~~~~---  150 (203)
                      ++++|+|||||||+|++.     +..+++.+|. ...........|  .+..+.+....... ...+.+   .+.+.   
T Consensus        34 ~ik~iifDlDGTLlds~~~~~~~~~~~~~~~g~-~~~~~~~~~~~G--~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~  109 (275)
T 2qlt_A           34 KINAALFDVDGTIIISQPAIAAFWRDFGKDKPY-FDAEHVIHISHG--WRTYDAIAKFAPDF-ADEEYVNKLEGEIPEKY  109 (275)
T ss_dssp             EESEEEECCBTTTEECHHHHHHHHHHHHTTCTT-CCHHHHHHHCTT--CCHHHHHHHHCGGG-CCHHHHHHHHHTHHHHH
T ss_pred             cCCEEEECCCCCCCCCHHHHHHHHHHHHHHcCC-CCHHHHHHHhcC--CCHHHHHHHHhccC-CcHHHHHHHHHHHHHHH
Confidence            479999999999999975     2334445562 122233333333  34444444332211 122222   22121   


Q ss_pred             hCCCCCCCcHHHHHHHHHHC-CCeEEEEcCCCHHHHHHHH-HcCCCcc
Q 028799          151 KRPPRLSPGIDELVKKLKAN-NKNVYLISGGFRHMINILN-ILKWDVL  196 (203)
Q Consensus       151 ~~~~~l~PG~~elL~~Lk~~-G~~vaIVTn~~~~~i~~ll-~lGL~~~  196 (203)
                      .....++||+.++|+.|++. |++++|+||+....++..+ .+|+..+
T Consensus       110 ~~~~~~~~g~~~~L~~l~~~~g~~l~i~T~~~~~~~~~~l~~~~l~~f  157 (275)
T 2qlt_A          110 GEHSIEVPGAVKLCNALNALPKEKWAVATSGTRDMAKKWFDILKIKRP  157 (275)
T ss_dssp             CTTCEECTTHHHHHHHHHTSCGGGEEEECSSCHHHHHHHHHHHTCCCC
T ss_pred             hcCCCcCcCHHHHHHHHHhccCCeEEEEeCCCHHHHHHHHHHcCCCcc
Confidence            12367899999999999999 9999999999999999988 8898754

>2g80_A Protein UTR4; YEL038W, UTR4 protein (unknown transcript 4 protein), struct genomics, PSI, protein structure initiative; 2.28A {Saccharomyces cerevisiae} SCOP: c.108.1.22

Probab=99.15  E-value=1.7e-10  Score=97.02  Aligned_cols=104  Identities=16%  Similarity=0.140  Sum_probs=61.4

Q ss_pred             CCcEEEEECCCcccccchHH------------HHHHHcCCCccHHHHHHHHhCCCCCHHHHHH---HHHhccCCC--HHH
Q 028799           82 TADAVCFDVDSTVCVDEGID------------ELAEFCGAGKAVAEWTARAMGGSVPFEEALA---ARLSLFKPS--LSQ  144 (203)
Q Consensus        82 ~~kaVIFD~DGTLiDse~~~------------~la~~~G~~~~~~~~~~~~~gG~~~~~e~l~---~~~~~~~~~--~e~  144 (203)
                      ++++|+|||||||+|++...            ..+..+|......+.... +.| .+..+...   ..+......  .++
T Consensus        30 ~ikaviFDlDGTLvDs~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~-~~g-~~~~~~~~~l~~~~~~~~~~~~~~~  107 (253)
T 2g80_A           30 NYSTYLLDIEGTVCPISFVKETLFPYFTNKVPQLVQQDTRDSPVSNILSQ-FHI-DNKEQLQAHILELVAKDVKDPILKQ  107 (253)
T ss_dssp             CCSEEEECCBTTTBCTHHHHHTHHHHHHHHHHHHHHSCCTTSHHHHHHHT-TCC-CCHHHHHHHHHHHHHTTCCCHHHHH
T ss_pred             CCcEEEEcCCCCcccccccchhhHHHHHHHHHHHHHHhcCcHHHHHHHHH-hhh-ccHHHHHHHHHHHHhcccchHHHHH
Confidence            47999999999999997421            112223443222233222 222 34433322   222211111  111


Q ss_pred             -----HHHHHHh--CCCCCCCcHHHHHHHHHHCCCeEEEEcCCCHHHHHHHH-Hc
Q 028799          145 -----VQDFLEK--RPPRLSPGIDELVKKLKANNKNVYLISGGFRHMINILN-IL  191 (203)
Q Consensus       145 -----l~~~~~~--~~~~l~PG~~elL~~Lk~~G~~vaIVTn~~~~~i~~ll-~l  191 (203)
                           +.+.+..  ...+++||+.++|+.    |++++|+||+++..++.++ ++
T Consensus       108 ~~~~~~~~~~~~~~~~~~~~pgv~e~L~~----g~~l~i~Tn~~~~~~~~~l~~~  158 (253)
T 2g80_A          108 LQGYVWAHGYESGQIKAPVYADAIDFIKR----KKRVFIYSSGSVKAQKLLFGYV  158 (253)
T ss_dssp             HHHHHHHHHHHTTSCCBCCCHHHHHHHHH----CSCEEEECSSCHHHHHHHHHSB
T ss_pred             HHHHHHHHHHHhCcccCCCCCCHHHHHHc----CCEEEEEeCCCHHHHHHHHHhh
Confidence                 2233332  136799999999988    9999999999999988888 66

>3skx_A Copper-exporting P-type ATPase B; P1B-ATPase, ATP binding domain, copper(II) transporter, MEMB protein, hydrolase; 1.59A {Archaeoglobus fulgidus} PDB: 3sky_A*

Probab=99.12  E-value=4e-12  Score=105.01  Aligned_cols=47  Identities=23%  Similarity=0.284  Sum_probs=42.7

Q ss_pred             CCCCcHHHHHHHHHHCCCeEEEEcCCCHHHHHHHH-HcCCCccceEEe
Q 028799          155 RLSPGIDELVKKLKANNKNVYLISGGFRHMINILN-ILKWDVLKVIQI  201 (203)
Q Consensus       155 ~l~PG~~elL~~Lk~~G~~vaIVTn~~~~~i~~ll-~lGL~~~~~i~i  201 (203)
                      +++||+.++|+.|+++|++++|+||++...++.++ .+|+..++...+
T Consensus       144 ~~~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~~~~~gl~~~f~~~~  191 (280)
T 3skx_A          144 RIRPESREAISKLKAIGIKCMMLTGDNRFVAKWVAEELGLDDYFAEVL  191 (280)
T ss_dssp             EECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCSEEECSCC
T ss_pred             CCCHhHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCChhHhHhcC
Confidence            68999999999999999999999999999999999 999988765443

>3umc_A Haloacid dehalogenase; HY; 2.15A {Pseudomonas aeruginosa}

Probab=99.12  E-value=2.1e-10  Score=92.88  Aligned_cols=114  Identities=19%  Similarity=0.117  Sum_probs=71.1

Q ss_pred             ccCCcEEEEECCCcccccch-----HHHHHHHcCCCccHHHHHHHHh-----------CCC---CCHHHH----HHHHHh
Q 028799           80 WRTADAVCFDVDSTVCVDEG-----IDELAEFCGAGKAVAEWTARAM-----------GGS---VPFEEA----LAARLS  136 (203)
Q Consensus        80 ~~~~kaVIFD~DGTLiDse~-----~~~la~~~G~~~~~~~~~~~~~-----------gG~---~~~~e~----l~~~~~  136 (203)
                      ..++++|+|||||||+|++.     +..+.+.+|...........+.           .+.   ..+.+.    +...+.
T Consensus        19 ~m~ik~i~fDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   98 (254)
T 3umc_A           19 FQGMRAILFDVFGTLVDWRSSLIEQFQALERELGGTLPCVELTDRWRQQYKPAMDRVRNGQAPWQHLDQLHRQSLEALAG   98 (254)
T ss_dssp             SSSCCEEEECCBTTTEEHHHHHHHHHHHHHHHSSSCCCHHHHHHHHHHHTHHHHHHHHTTSSCCCCHHHHHHHHHHHHHH
T ss_pred             ccCCcEEEEeCCCccEecCccHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhcccCCcccHHHHHHHHHHHHHH
Confidence            34689999999999999864     4456667787643322222211           111   122222    111111


Q ss_pred             ccCC--CHHHHHHHHHh-CCCCCCCcHHHHHHHHHHCCCeEEEEcCCCHHHHHHHH-HcCCC
Q 028799          137 LFKP--SLSQVQDFLEK-RPPRLSPGIDELVKKLKANNKNVYLISGGFRHMINILN-ILKWD  194 (203)
Q Consensus       137 ~~~~--~~e~l~~~~~~-~~~~l~PG~~elL~~Lk~~G~~vaIVTn~~~~~i~~ll-~lGL~  194 (203)
                      ....  ..+....+... ....++||+.++|+.|++. ++++|+||++...++.++ .+|+.
T Consensus        99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~-~~~~i~s~~~~~~~~~~l~~~g~~  159 (254)
T 3umc_A           99 EFGLALDEALLQRITGFWHRLRPWPDTLAGMHALKAD-YWLAALSNGNTALMLDVARHAGLP  159 (254)
T ss_dssp             HTTCCCCHHHHHHHHGGGGSCEECTTHHHHHHHHTTT-SEEEECCSSCHHHHHHHHHHHTCC
T ss_pred             HhCCCCCHHHHHHHHHHHhcCCCCccHHHHHHHHHhc-CeEEEEeCCCHHHHHHHHHHcCCC
Confidence            1111  22222222221 1357899999999999985 999999999999999988 88986

>1swv_A Phosphonoacetaldehyde hydrolase; HAD enzyme superfamily, phosphonotase, metal binding; 2.30A {Bacillus cereus} SCOP: c.108.1.3 PDB: 1sww_A 2iof_A* 2ioh_A 1rql_A 1rqn_A 2iof_K* 1rdf_A 1fez_A

Probab=99.07  E-value=7.4e-10  Score=90.82  Aligned_cols=111  Identities=19%  Similarity=0.222  Sum_probs=68.6

Q ss_pred             CCcEEEEECCCcccccch------HHHHHHHcCCCccHHHHHHHHhCCCCCHHHHHHH-------------HHhccCCCH
Q 028799           82 TADAVCFDVDSTVCVDEG------IDELAEFCGAGKAVAEWTARAMGGSVPFEEALAA-------------RLSLFKPSL  142 (203)
Q Consensus        82 ~~kaVIFD~DGTLiDse~------~~~la~~~G~~~~~~~~~~~~~gG~~~~~e~l~~-------------~~~~~~~~~  142 (203)
                      ++++|+|||||||+|++.      +...++.+|....... .....+  ....+.+..             .+... .+.
T Consensus         5 ~ik~i~fDlDGTLld~~~~~~~~~~~~~l~~~G~~~~~~~-~~~~~g--~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~   80 (267)
T 1swv_A            5 KIEAVIFAWAGTTVDYGCFAPLEVFMEIFHKRGVAITAEE-ARKPMG--LLKIDHVRALTEMPRIASEWNRVFRQL-PTE   80 (267)
T ss_dssp             CCCEEEECSBTTTBSTTCCTTHHHHHHHHHTTTCCCCHHH-HHTTTT--SCHHHHHHHHHHSHHHHHHHHHHHSSC-CCH
T ss_pred             CceEEEEecCCCEEeCCCccHHHHHHHHHHHcCCCCCHHH-HHHHhc--cchHHHHHHhcccHHHHHHHHHHhCCC-CCH
Confidence            479999999999999865      2334455676533222 222232  222222111             11110 122


Q ss_pred             HHHH-------HHHH---hCCCCCCCcHHHHHHHHHHCCCeEEEEcCCCHHHHHHHH-HcCCCcc
Q 028799          143 SQVQ-------DFLE---KRPPRLSPGIDELVKKLKANNKNVYLISGGFRHMINILN-ILKWDVL  196 (203)
Q Consensus       143 e~l~-------~~~~---~~~~~l~PG~~elL~~Lk~~G~~vaIVTn~~~~~i~~ll-~lGL~~~  196 (203)
                      +.+.       +.+.   .....++||+.++++.|++.|++++++||+....++.++ .+|+..+
T Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~~~~~  145 (267)
T 1swv_A           81 ADIQEMYEEFEEILFAILPRYASPINGVKEVIASLRERGIKIGSTTGYTREMMDIVAKEAALQGY  145 (267)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGGCCBCTTHHHHHHHHHHTTCEEEEBCSSCHHHHHHHHHHHHHTTC
T ss_pred             HHHHHHHHHHHHHHHHhhccccccCccHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHcCCccc
Confidence            2111       1111   113578999999999999999999999999999888888 8777655

>3i28_A Epoxide hydrolase 2; aromatic hydrocarbons catabolism, detoxification, magnesium, metal-binding, peroxisome; HET: 34N; 1.95A {Homo sapiens} PDB: 1s8o_A* 1zd2_P* 1vj5_A* 1zd4_A* 1zd5_A* 3i1y_A* 1zd3_A* 3koo_A* 3otq_A* 4hai_A* 1cqz_A 1cr6_A* 1ek1_A* 1ek2_A* 3ans_A* 3ant_A* 3pdc_A*

Probab=99.06  E-value=9.1e-11  Score=104.03  Aligned_cols=118  Identities=14%  Similarity=0.161  Sum_probs=66.4

Q ss_pred             CCcEEEEECCCcccccchHH---HHHHHcCCCccH----------HHHHHHHhCCCCCHHHHHHHHHhc-------cC--
Q 028799           82 TADAVCFDVDSTVCVDEGID---ELAEFCGAGKAV----------AEWTARAMGGSVPFEEALAARLSL-------FK--  139 (203)
Q Consensus        82 ~~kaVIFD~DGTLiDse~~~---~la~~~G~~~~~----------~~~~~~~~gG~~~~~e~l~~~~~~-------~~--  139 (203)
                      ++++|+|||||||++++...   .....+|.....          .....+...|..+..+........       ..  
T Consensus         2 ~~k~viFD~DGTL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (555)
T 3i28_A            2 TLRAAVFDLDGVLALPAVFGVLGRTEEALALPRGLLNDAFQKGGPEGATTRLMKGEITLSQWIPLMEENCRKCSETAKVC   81 (555)
T ss_dssp             --CEEEECTBTTTEESCTHHHHHHHHHHTTCCTTHHHHHHHTTGGGSHHHHHHTTSSCHHHHHHHHHHHHHHHHHHTTCC
T ss_pred             ceEEEEEecCCeeecchhHHHHHHHHHHhCCcHHHHHHHHhccCcccchhHHhcCCCCHHHHHHHHHHHHHHhhhccCCC
Confidence            57999999999999876543   333445544211          012223333445544433221111       00  


Q ss_pred             -C---CHHH-HHHHHHhCCCCCCCcHHHHHHHHHHCCCeEEEEcCC------CHHHHHHHHHcCCCccceEEec
Q 028799          140 -P---SLSQ-VQDFLEKRPPRLSPGIDELVKKLKANNKNVYLISGG------FRHMINILNILKWDVLKVIQIT  202 (203)
Q Consensus       140 -~---~~e~-l~~~~~~~~~~l~PG~~elL~~Lk~~G~~vaIVTn~------~~~~i~~ll~lGL~~~~~i~it  202 (203)
                       .   ..++ +.+++..  ..++||+.++|+.|+++|++++|+||+      .+..+...+ .|+..++..+++
T Consensus        82 ~~~~~~~~~~~~~~~~~--~~~~~~~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~~~~~~~~-~~l~~~fd~i~~  152 (555)
T 3i28_A           82 LPKNFSIKEIFDKAISA--RKINRPMLQAALMLRKKGFTTAILTNTWLDDRAERDGLAQLM-CELKMHFDFLIE  152 (555)
T ss_dssp             CCTTCCHHHHHHHHHHH--CEECHHHHHHHHHHHHTTCEEEEEECCCCCCSTTHHHHHHHH-HHHHTTSSEEEE
T ss_pred             CCccccHHHHHHHhHhh--cCcChhHHHHHHHHHHCCCEEEEEeCCCccccchhhHHHHHh-hhhhhheeEEEe
Confidence             0   0122 2233333  589999999999999999999999998      444333332 255555555554

>2i33_A Acid phosphatase; HAD superfamily, hydrolase; 1.57A {Bacillus anthracis} PDB: 2i34_A

Probab=99.06  E-value=2.6e-10  Score=96.41  Aligned_cols=92  Identities=16%  Similarity=0.172  Sum_probs=63.9

Q ss_pred             ccCCcEEEEECCCcccccchHHHHHHHcCCCccHHHHHHHHhCCCCCHHHHHHHHHhccCCCHHHHHHHHHhCCCCCCCc
Q 028799           80 WRTADAVCFDVDSTVCVDEGIDELAEFCGAGKAVAEWTARAMGGSVPFEEALAARLSLFKPSLSQVQDFLEKRPPRLSPG  159 (203)
Q Consensus        80 ~~~~kaVIFD~DGTLiDse~~~~la~~~G~~~~~~~~~~~~~gG~~~~~e~l~~~~~~~~~~~e~l~~~~~~~~~~l~PG  159 (203)
                      -.++++|+||+||||+|++.+.......+.                .+.              +.+.++......+++||
T Consensus        56 ~~~~kavifDlDGTLld~~~~~~~~~~~~~----------------~~~--------------~~~~~~~~~~~~~~~pg  105 (258)
T 2i33_A           56 TEKKPAIVLDLDETVLDNSPHQAMSVKTGK----------------GYP--------------YKWDDWINKAEAEALPG  105 (258)
T ss_dssp             CSSEEEEEECSBTTTEECHHHHHHHHHHSC----------------CTT--------------TTHHHHHHHCCCEECTT
T ss_pred             CCCCCEEEEeCcccCcCCHHHHHHHHhccc----------------chH--------------HHHHHHHHcCCCCcCcc
Confidence            456889999999999998764322221111                000              01122333334689999


Q ss_pred             HHHHHHHHHHCCCeEEEEcCCC---HHHHHHHH-HcCCC--ccceEEe
Q 028799          160 IDELVKKLKANNKNVYLISGGF---RHMINILN-ILKWD--VLKVIQI  201 (203)
Q Consensus       160 ~~elL~~Lk~~G~~vaIVTn~~---~~~i~~ll-~lGL~--~~~~i~i  201 (203)
                      +.++|+.|+++|++++|+||++   +..+...+ .+|+.  .++.+.+
T Consensus       106 ~~e~L~~L~~~Gi~i~iaTnr~~~~~~~~~~~L~~~Gl~~v~~~~vi~  153 (258)
T 2i33_A          106 SIDFLKYTESKGVDIYYISNRKTNQLDATIKNLERVGAPQATKEHILL  153 (258)
T ss_dssp             HHHHHHHHHHTTCEEEEEEEEEGGGHHHHHHHHHHHTCSSCSTTTEEE
T ss_pred             HHHHHHHHHHCCCEEEEEcCCchhHHHHHHHHHHHcCCCcCCCceEEE
Confidence            9999999999999999999998   56677777 88998  5555544

>3a1c_A Probable copper-exporting P-type ATPase A; ATP-binding, cell membrane, copper transport, hydrolase, ION transport, magnesium, membrane; HET: ACP; 1.85A {Archaeoglobus fulgidus} PDB: 3a1d_A* 3a1e_A* 2b8e_A 2voy_J 2voy_I

Probab=99.05  E-value=4.3e-11  Score=101.33  Aligned_cols=45  Identities=20%  Similarity=0.226  Sum_probs=41.6

Q ss_pred             CCCCCcHHHHHHHHHHCCCeEEEEcCCCHHHHHHHH-HcCCCccce
Q 028799          154 PRLSPGIDELVKKLKANNKNVYLISGGFRHMINILN-ILKWDVLKV  198 (203)
Q Consensus       154 ~~l~PG~~elL~~Lk~~G~~vaIVTn~~~~~i~~ll-~lGL~~~~~  198 (203)
                      .+++||+.++|+.|+++|++++|+||++...++.++ .+|+..++.
T Consensus       162 ~~~~~g~~~~l~~L~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~f~  207 (287)
T 3a1c_A          162 DTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLDLVIA  207 (287)
T ss_dssp             CCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCSEEEC
T ss_pred             cccchhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhCCceeee
Confidence            579999999999999999999999999999999999 999987654

>3vay_A HAD-superfamily hydrolase; rossmann fold, haloacid dehalogenase; 1.98A {Pseudomonas syringae PV}

Probab=98.91  E-value=5.9e-09  Score=83.04  Aligned_cols=44  Identities=11%  Similarity=0.104  Sum_probs=36.9

Q ss_pred             CCCCCCcHHHHHHHHHHCCCeEEEEcCCCHHHHHHHH-HcCCCccceEEec
Q 028799          153 PPRLSPGIDELVKKLKANNKNVYLISGGFRHMINILN-ILKWDVLKVIQIT  202 (203)
Q Consensus       153 ~~~l~PG~~elL~~Lk~~G~~vaIVTn~~~~~i~~ll-~lGL~~~~~i~it  202 (203)
                      ...++||+.++|+.|+++ ++++|+||+...     + .+|+..++...++
T Consensus       103 ~~~~~~~~~~~l~~l~~~-~~~~i~t~~~~~-----l~~~~l~~~f~~~~~  147 (230)
T 3vay_A          103 QVQIFPEVQPTLEILAKT-FTLGVITNGNAD-----VRRLGLADYFAFALC  147 (230)
T ss_dssp             CCCBCTTHHHHHHHHHTT-SEEEEEESSCCC-----GGGSTTGGGCSEEEE
T ss_pred             cCccCcCHHHHHHHHHhC-CeEEEEECCchh-----hhhcCcHHHeeeeEE
Confidence            468999999999999998 999999999865     5 7888776665554

>3ib6_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.20A {Listeria monocytogenes}

Probab=98.90  E-value=1.2e-09  Score=86.81  Aligned_cols=50  Identities=14%  Similarity=-0.021  Sum_probs=45.5

Q ss_pred             CCCCCcHHHHHHHHHHCCCeEEEEcCCCH---HHHHHHH-HcCCCccceEEecC
Q 028799          154 PRLSPGIDELVKKLKANNKNVYLISGGFR---HMINILN-ILKWDVLKVIQITS  203 (203)
Q Consensus       154 ~~l~PG~~elL~~Lk~~G~~vaIVTn~~~---~~i~~ll-~lGL~~~~~i~it~  203 (203)
                      .+++||+.++|+.|+++|++++|+||++.   ..++.++ .+|+..++..+++|
T Consensus        33 ~~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~~~~l~~~gl~~~fd~i~~~   86 (189)
T 3ib6_A           33 VVLRKNAKETLEKVKQLGFKQAILSNTATSDTEVIKRVLTNFGIIDYFDFIYAS   86 (189)
T ss_dssp             CCBCTTHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHTTCGGGEEEEEEC
T ss_pred             ceeCcCHHHHHHHHHHCCCEEEEEECCCccchHHHHHHHHhcCchhheEEEEEc
Confidence            68999999999999999999999999987   8888888 99999888877764

>2oda_A Hypothetical protein pspto_2114; haloacid dehalogenase, phosphonoacetaldehyde hydrolase, protein binding; HET: EPE; 1.90A {Pseudomonas syringae PV}

Probab=98.88  E-value=5.5e-10  Score=90.07  Aligned_cols=35  Identities=20%  Similarity=0.251  Sum_probs=31.3

Q ss_pred             CCCCCcHHHHHHHHHHCCCeEEEEcCCCHHHHHHH
Q 028799          154 PRLSPGIDELVKKLKANNKNVYLISGGFRHMINIL  188 (203)
Q Consensus       154 ~~l~PG~~elL~~Lk~~G~~vaIVTn~~~~~i~~l  188 (203)
                      ..++||+.++|+.|+++|++++|+||+++..+..+
T Consensus        35 ~~~~pg~~e~L~~L~~~g~~~~i~T~~~~~~~~~~   69 (196)
T 2oda_A           35 AQLTPGAQNALKALRDQGMPCAWIDELPEALSTPL   69 (196)
T ss_dssp             GSBCTTHHHHHHHHHHHTCCEEEECCSCHHHHHHH
T ss_pred             CCcCcCHHHHHHHHHHCCCEEEEEcCChHHHHHHh
Confidence            57899999999999999999999999998877443

>4as2_A Phosphorylcholine phosphatase; hydrolase, HAD superfamily, alkylammonium compounds; HET: BTB; 2.12A {Pseudomonas aeruginosa} PDB: 4as3_A*

Probab=98.83  E-value=2.1e-08  Score=87.61  Aligned_cols=48  Identities=29%  Similarity=0.403  Sum_probs=43.8

Q ss_pred             CCCCcHHHHHHHHHHCCCeEEEEcCCCHHHHHHHH-H----cCCCccceEEec
Q 028799          155 RLSPGIDELVKKLKANNKNVYLISGGFRHMINILN-I----LKWDVLKVIQIT  202 (203)
Q Consensus       155 ~l~PG~~elL~~Lk~~G~~vaIVTn~~~~~i~~ll-~----lGL~~~~~i~it  202 (203)
                      .++|++.+++++|+++|++++|||+++.++++++. .    +|++.-.+|.++
T Consensus       143 ~~~~~~~~l~~~l~~~G~~v~ivSas~~~~v~~~a~~~~~~ygIp~e~ViG~~  195 (327)
T 4as2_A          143 RVFSGQRELYNKLMENGIEVYVISAAHEELVRMVAADPRYGYNAKPENVIGVT  195 (327)
T ss_dssp             EECHHHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHTCGGGSCCCCGGGEEEEC
T ss_pred             ccCHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHhhcccccCCCHHHeEeee
Confidence            68999999999999999999999999999999998 5    788888888753

>2wm8_A MDP-1, magnesium-dependent phosphatase 1; haloacid dehalogenase, protein phosphatase, hydrolase, magne metal-binding; 1.75A {Homo sapiens} PDB: 1u7o_A 1u7p_A

Probab=98.80  E-value=8.3e-09  Score=81.55  Aligned_cols=47  Identities=21%  Similarity=0.092  Sum_probs=42.4

Q ss_pred             CCCCCcHHHHHHHHHHCCCeEEEEcCCC-HHHHHHHH-HcCCCccceEE
Q 028799          154 PRLSPGIDELVKKLKANNKNVYLISGGF-RHMINILN-ILKWDVLKVIQ  200 (203)
Q Consensus       154 ~~l~PG~~elL~~Lk~~G~~vaIVTn~~-~~~i~~ll-~lGL~~~~~i~  200 (203)
                      .+++||+.++|+.|+++|++++|+||++ +..++.++ .+|+..++...
T Consensus        67 ~~~~~g~~e~L~~L~~~G~~v~ivT~~~~~~~~~~~l~~~gl~~~f~~~  115 (187)
T 2wm8_A           67 VRLYPEVPEVLKRLQSLGVPGAAASRTSEIEGANQLLELFDLFRYFVHR  115 (187)
T ss_dssp             ECCCTTHHHHHHHHHHHTCCEEEEECCSCHHHHHHHHHHTTCTTTEEEE
T ss_pred             cCcchhHHHHHHHHHHCCceEEEEeCCCChHHHHHHHHHcCcHhhccee
Confidence            5789999999999999999999999999 78899999 99998776653

>3mn1_A Probable YRBI family phosphatase; structural genomics, PSI, protein structure initiative, NYSG phosphatase; 1.80A {Pseudomonas syringae PV} PDB: 3nrj_A

Probab=98.77  E-value=1.9e-09  Score=86.11  Aligned_cols=36  Identities=22%  Similarity=0.130  Sum_probs=33.2

Q ss_pred             HHHHHHHCCCeEEEEcCCCHHHHHHHH-HcCCCccce
Q 028799          163 LVKKLKANNKNVYLISGGFRHMINILN-ILKWDVLKV  198 (203)
Q Consensus       163 lL~~Lk~~G~~vaIVTn~~~~~i~~ll-~lGL~~~~~  198 (203)
                      +|+.|+++|++++|+||++...++.++ .+|++.++.
T Consensus        54 ~l~~L~~~g~~~~i~T~~~~~~~~~~~~~lgl~~~f~   90 (189)
T 3mn1_A           54 GIKMLIASGVTTAIISGRKTAIVERRAKSLGIEHLFQ   90 (189)
T ss_dssp             HHHHHHHTTCEEEEECSSCCHHHHHHHHHHTCSEEEC
T ss_pred             HHHHHHHCCCEEEEEECcChHHHHHHHHHcCCHHHhc
Confidence            899999999999999999999999999 999987653

>3ij5_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; IDP022 hydrolase, lipopolysaccharide biosynthesis, magnesium, STRU genomics; 1.95A {Yersinia pestis}

Probab=98.75  E-value=2.6e-09  Score=87.47  Aligned_cols=36  Identities=17%  Similarity=0.144  Sum_probs=33.1

Q ss_pred             HHHHHHHCCCeEEEEcCCCHHHHHHHH-HcCCCccce
Q 028799          163 LVKKLKANNKNVYLISGGFRHMINILN-ILKWDVLKV  198 (203)
Q Consensus       163 lL~~Lk~~G~~vaIVTn~~~~~i~~ll-~lGL~~~~~  198 (203)
                      +|+.|+++|++++|+||++...++.++ .+|+..++.
T Consensus        84 ~L~~L~~~G~~l~I~T~~~~~~~~~~l~~lgi~~~f~  120 (211)
T 3ij5_A           84 GIRCLITSDIDVAIITGRRAKLLEDRANTLGITHLYQ  120 (211)
T ss_dssp             HHHHHHHTTCEEEEECSSCCHHHHHHHHHHTCCEEEC
T ss_pred             HHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCchhhc
Confidence            999999999999999999999999999 999987543

>3l8h_A Putative haloacid dehalogenase-like hydrolase; HAD superfamily, GMHB, D-glycero-D-manno-heptose-1, 7-bispho phosphatase; HET: FX1; 1.68A {Bordetella bronchiseptica}

Probab=98.73  E-value=2.6e-08  Score=77.52  Aligned_cols=44  Identities=14%  Similarity=0.052  Sum_probs=38.2

Q ss_pred             CCCCCcHHHHHHHHHHCCCeEEEEcCCCH---------------HHHHHHH-HcC--CCccc
Q 028799          154 PRLSPGIDELVKKLKANNKNVYLISGGFR---------------HMINILN-ILK--WDVLK  197 (203)
Q Consensus       154 ~~l~PG~~elL~~Lk~~G~~vaIVTn~~~---------------~~i~~ll-~lG--L~~~~  197 (203)
                      .+++||+.++|+.|+++|++++|+||++.               ..++..+ .+|  ++.++
T Consensus        26 ~~~~~g~~~~l~~L~~~g~~~~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~   87 (179)
T 3l8h_A           26 WIALPGSLQAIARLTQADWTVVLATNQSGLARGLFDTATLNAIHDKMHRALAQMGGVVDAIF   87 (179)
T ss_dssp             CCBCTTHHHHHHHHHHTTCEEEEEEECTTTTTTSSCHHHHHHHHHHHHHHHHHTTCCCCEEE
T ss_pred             ceECcCHHHHHHHHHHCCCEEEEEECCCccccCcCCHHHHHHHHHHHHHHHHhCCCceeEEE
Confidence            57899999999999999999999999986               5667778 888  66654

>2b82_A APHA, class B acid phosphatase; DDDD acid phosphatase, metallo-ENZ hydrolase; HET: ADN; 1.25A {Escherichia coli} SCOP: c.108.1.12 PDB: 2b8j_A* 2hf7_A 1rmt_A* 1n9k_A 1rmq_A 1n8n_A* 1rmy_A* 2g1a_A* 3cz4_A 2heg_A* 1z5g_A 1z5u_A* 1z88_A 2aut_A

Probab=98.72  E-value=1.6e-09  Score=88.36  Aligned_cols=31  Identities=6%  Similarity=0.104  Sum_probs=27.2

Q ss_pred             CCCCcHHHHHHHHHHCCCeEEEEcCCCHHHH
Q 028799          155 RLSPGIDELVKKLKANNKNVYLISGGFRHMI  185 (203)
Q Consensus       155 ~l~PG~~elL~~Lk~~G~~vaIVTn~~~~~i  185 (203)
                      .++||+.++|+.|+++|++++|+||++...+
T Consensus        88 ~~~~~~~e~l~~L~~~G~~l~ivTn~~~~~~  118 (211)
T 2b82_A           88 IPKEVARQLIDMHVRRGDAIFFVTGRSPTKT  118 (211)
T ss_dssp             EECHHHHHHHHHHHHHTCEEEEEECSCCCSS
T ss_pred             CCcHHHHHHHHHHHHCCCEEEEEcCCcHHHH
Confidence            4688999999999999999999999976543

>1y8a_A Hypothetical protein AF1437; structural genomics, protein structu initiative, PSI, midwest center for structural genomics; 1.40A {Archaeoglobus fulgidus} SCOP: c.108.1.24

Probab=98.71  E-value=2.9e-08  Score=85.57  Aligned_cols=114  Identities=11%  Similarity=0.057  Sum_probs=67.4

Q ss_pred             hhccCCcEEEEECCCcccccchHHHHHHHcCCCccHHHHHHHHh---CCCC---CHH--HHHHHH--HhccCC-CHHHHH
Q 028799           78 QLWRTADAVCFDVDSTVCVDEGIDELAEFCGAGKAVAEWTARAM---GGSV---PFE--EALAAR--LSLFKP-SLSQVQ  146 (203)
Q Consensus        78 ~~~~~~kaVIFD~DGTLiDse~~~~la~~~G~~~~~~~~~~~~~---gG~~---~~~--e~l~~~--~~~~~~-~~e~l~  146 (203)
                      ....++++|+|||||||+|++....+.+..+.+......+.+..   .+..   .+.  +.+...  +-...| ......
T Consensus        16 ~~~~~~kli~fDlDGTLld~~~~~~l~~~~~~g~~~~~~tGR~~~~~~~~~~~~~~~~~~~l~~~~~~i~~nGa~i~~~~   95 (332)
T 1y8a_A           16 NLYFQGHMFFTDWEGPWILTDFALELCMAVFNNARFFSNLSEYDDYLAYEVRREGYEAGYTLKLLTPFLAAAGVKNRDVE   95 (332)
T ss_dssp             ----CCCEEEECSBTTTBCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHTTCCTTCCTTTHHHHHHHHHHHTTCCHHHHH
T ss_pred             hhCCCceEEEEECcCCCcCccHHHHHHHHHHCCCEEEEEcCCCchhhhhhhhccCeechhhcCCcCeEEEcCCcEEEECC
Confidence            34557899999999999999887655555554433222333322   1111   111  111111  101123 222223


Q ss_pred             HHHHhCCCCCCCcHHHHHHHHHHCCCeEEEEcCCCHHHHHHHH-HcCC
Q 028799          147 DFLEKRPPRLSPGIDELVKKLKANNKNVYLISGGFRHMINILN-ILKW  193 (203)
Q Consensus       147 ~~~~~~~~~l~PG~~elL~~Lk~~G~~vaIVTn~~~~~i~~ll-~lGL  193 (203)
                      +.+.. ...+.|++.++++.|++ |++++++|++....+.... .+++
T Consensus        96 ~~~~~-~~~~~~~~~~~l~~l~~-g~~~~i~t~~~~~~~~~~~~~~~~  141 (332)
T 1y8a_A           96 RIAEL-SAKFVPDAEKAMATLQE-RWTPVVISTSYTQYLRRTASMIGV  141 (332)
T ss_dssp             HHHHH-HCCBCTTHHHHHHHHHT-TCEEEEEEEEEHHHHHHHHHHTTC
T ss_pred             eEeec-cCCCHHHHHHHHHHHHc-CCcEEEEECCceEEEcccchhhhh
Confidence            33433 13679999999999999 9999999999877777777 7777

>2gmw_A D,D-heptose 1,7-bisphosphate phosphatase; Zn-binding protein, hydrolase; 1.50A {Escherichia coli} SCOP: c.108.1.19 PDB: 3esq_A 3esr_A 3l1u_A 3l1v_A 3l8e_A 3l8f_A 3l8g_A*

Probab=98.69  E-value=5.1e-08  Score=78.72  Aligned_cols=41  Identities=10%  Similarity=0.065  Sum_probs=37.3

Q ss_pred             CCCCCcHHHHHHHHHHCCCeEEEEcCCC---------------HHHHHHHH-HcCCC
Q 028799          154 PRLSPGIDELVKKLKANNKNVYLISGGF---------------RHMINILN-ILKWD  194 (203)
Q Consensus       154 ~~l~PG~~elL~~Lk~~G~~vaIVTn~~---------------~~~i~~ll-~lGL~  194 (203)
                      .+++||+.++|+.|+++|++++|+||++               ...++.++ .+|+.
T Consensus        49 ~~~~pg~~e~L~~L~~~G~~~~ivTn~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~  105 (211)
T 2gmw_A           49 FEFIDGVIDAMRELKKMGFALVVVTNQSGIARGKFTEAQFETLTEWMDWSLADRDVD  105 (211)
T ss_dssp             CCBCTTHHHHHHHHHHTTCEEEEEEECTHHHHTSSCHHHHHHHHHHHHHHHHHTTCC
T ss_pred             CcCCcCHHHHHHHHHHCCCeEEEEECcCCcCCCccCHHHHHHHHHHHHHHHHHcCCc
Confidence            5789999999999999999999999999               47778888 99987

>2pr7_A Haloacid dehalogenase/epoxide hydrolase family; NP_599989.1, uncharacterized protein, structural genomics; 1.44A {Corynebacterium glutamicum atcc 13032}

Probab=98.68  E-value=2.9e-09  Score=78.62  Aligned_cols=47  Identities=11%  Similarity=-0.077  Sum_probs=40.0

Q ss_pred             CCCcHHHHHHHHHHCCCeEEEEcCCCHHHHHHHH-HcCCCccceEEec
Q 028799          156 LSPGIDELVKKLKANNKNVYLISGGFRHMINILN-ILKWDVLKVIQIT  202 (203)
Q Consensus       156 l~PG~~elL~~Lk~~G~~vaIVTn~~~~~i~~ll-~lGL~~~~~i~it  202 (203)
                      ++||+.++|+.|+++|++++|+||++...++.++ .+|+..++...++
T Consensus        19 ~~~~~~~~l~~L~~~G~~~~i~S~~~~~~~~~~l~~~~l~~~f~~i~~   66 (137)
T 2pr7_A           19 DQRRWRNLLAAAKKNGVGTVILSNDPGGLGAAPIRELETNGVVDKVLL   66 (137)
T ss_dssp             HHHHHHHHHHHHHHTTCEEEEEECSCCGGGGHHHHHHHHTTSSSEEEE
T ss_pred             cCccHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHCChHhhccEEEE
Confidence            4678899999999999999999999999888888 8888776665554

>2p9j_A Hypothetical protein AQ2171; secsg, riken, PSI, structural GENO protein structure initiative, southeast collaboratory for S genomics; 2.40A {Aquifex aeolicus}

Probab=98.65  E-value=3.7e-09  Score=81.41  Aligned_cols=42  Identities=14%  Similarity=-0.073  Sum_probs=37.4

Q ss_pred             CCCcHHHHHHHHHHCCCeEEEEcCCCHHHHHHHH-HcCCCccc
Q 028799          156 LSPGIDELVKKLKANNKNVYLISGGFRHMINILN-ILKWDVLK  197 (203)
Q Consensus       156 l~PG~~elL~~Lk~~G~~vaIVTn~~~~~i~~ll-~lGL~~~~  197 (203)
                      +.|+..++|+.|+++|++++|+||++...++.++ .+|+..++
T Consensus        37 ~~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~~   79 (162)
T 2p9j_A           37 FNVLDGIGIKLLQKMGITLAVISGRDSAPLITRLKELGVEEIY   79 (162)
T ss_dssp             EEHHHHHHHHHHHTTTCEEEEEESCCCHHHHHHHHHTTCCEEE
T ss_pred             ecccHHHHHHHHHHCCCEEEEEeCCCcHHHHHHHHHcCCHhhc
Confidence            4566789999999999999999999999999999 99998654

>3mmz_A Putative HAD family hydrolase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.84A {Streptomyces avermitilis}

Probab=98.63  E-value=8.4e-09  Score=81.42  Aligned_cols=32  Identities=13%  Similarity=0.124  Sum_probs=30.8

Q ss_pred             HHHHHHHCCCeEEEEcCCCHHHHHHHH-HcCCC
Q 028799          163 LVKKLKANNKNVYLISGGFRHMINILN-ILKWD  194 (203)
Q Consensus       163 lL~~Lk~~G~~vaIVTn~~~~~i~~ll-~lGL~  194 (203)
                      +|+.|+++|++++|+||++...++.++ .+|++
T Consensus        47 ~l~~L~~~g~~~~i~T~~~~~~~~~~~~~lgi~   79 (176)
T 3mmz_A           47 GIAALRKSGLTMLILSTEQNPVVAARARKLKIP   79 (176)
T ss_dssp             HHHHHHHTTCEEEEEESSCCHHHHHHHHHHTCC
T ss_pred             HHHHHHHCCCeEEEEECcChHHHHHHHHHcCCe
Confidence            899999999999999999999999999 99998

>3ocu_A Lipoprotein E; hydrolase, outer membrane; HET: NMN; 1.35A {Haemophilus influenzae} PDB: 3ocv_A* 3ocw_A* 3ocx_A* 3ocz_A* 3ocy_A* 3sf0_A* 2hlk_A 2hll_A 3et4_A 3et5_A

Probab=98.62  E-value=1.1e-07  Score=80.87  Aligned_cols=88  Identities=14%  Similarity=0.115  Sum_probs=60.1

Q ss_pred             cCCcEEEEECCCcccccchHHHHHHHcCCCccHHHHHHHHhCCCCCHHHHHHHHHhccCCCHHHHHHHHHhCCCCCCCcH
Q 028799           81 RTADAVCFDVDSTVCVDEGIDELAEFCGAGKAVAEWTARAMGGSVPFEEALAARLSLFKPSLSQVQDFLEKRPPRLSPGI  160 (203)
Q Consensus        81 ~~~kaVIFD~DGTLiDse~~~~la~~~G~~~~~~~~~~~~~gG~~~~~e~l~~~~~~~~~~~e~l~~~~~~~~~~l~PG~  160 (203)
                      .+.++||||+||||+|+..+..-...-+.+              .               +...+.++++....+++||+
T Consensus        56 ~~~~avVfDIDgTlldn~~y~~~~~~~~~~--------------f---------------~~~~w~~wv~~~~~~~~pG~  106 (262)
T 3ocu_A           56 GKKKAVVADLNETMLDNSPYAGWQVQNNKP--------------F---------------DGKDWTRWVDARQSRAVPGA  106 (262)
T ss_dssp             TCEEEEEECCBTTTEECHHHHHHHHHHTCC--------------C---------------CHHHHHHHHHHTCCEECTTH
T ss_pred             CCCeEEEEECCCcCCCCchhhhhhcccccc--------------C---------------CHHHHHHHHHcCCCCCCccH
Confidence            345699999999999965422110000000              1               12223344443457899999


Q ss_pred             HHHHHHHHHCCCeEEEEcCCCH----HHHHHHH-HcCCCccc
Q 028799          161 DELVKKLKANNKNVYLISGGFR----HMINILN-ILKWDVLK  197 (203)
Q Consensus       161 ~elL~~Lk~~G~~vaIVTn~~~----~~i~~ll-~lGL~~~~  197 (203)
                      .++|+.|+++|++++|+||.+.    ..+...+ .+|++.+.
T Consensus       107 ~ell~~L~~~G~ki~ivTgR~~~~~r~~T~~~L~~lGi~~~~  148 (262)
T 3ocu_A          107 VEFNNYVNSHNGKVFYVTNRKDSTEKSGTIDDMKRLGFNGVE  148 (262)
T ss_dssp             HHHHHHHHHTTEEEEEEEEEETTTTHHHHHHHHHHHTCSCCS
T ss_pred             HHHHHHHHHCCCeEEEEeCCCccchHHHHHHHHHHcCcCccc
Confidence            9999999999999999999864    5777778 99998643

>3pct_A Class C acid phosphatase; hydrolase, outer membrane; 1.85A {Pasteurella multocida}

Probab=98.59  E-value=9.9e-08  Score=81.02  Aligned_cols=86  Identities=19%  Similarity=0.203  Sum_probs=59.6

Q ss_pred             CcEEEEECCCcccccchHHHHHHHcCCCccHHHHHHHHhCCCCCHHHHHHHHHhccCCCHHHHHHHHHhCCCCCCCcHHH
Q 028799           83 ADAVCFDVDSTVCVDEGIDELAEFCGAGKAVAEWTARAMGGSVPFEEALAARLSLFKPSLSQVQDFLEKRPPRLSPGIDE  162 (203)
Q Consensus        83 ~kaVIFD~DGTLiDse~~~~la~~~G~~~~~~~~~~~~~gG~~~~~e~l~~~~~~~~~~~e~l~~~~~~~~~~l~PG~~e  162 (203)
                      .++||||+||||+|+..+..-...-+..              .               +...+.+++.....+++||+.+
T Consensus        58 ~~avVfDIDgTlldn~~y~~~~~~~~~~--------------f---------------~~~~w~~wv~~g~~~~~pg~~e  108 (260)
T 3pct_A           58 KKAVVVDLDETMIDNSAYAGWQVQSGQG--------------F---------------SPKTWTKWVDARQSAAIPGAVE  108 (260)
T ss_dssp             CEEEEECCBTTTEECHHHHHHHHHHTCC--------------C---------------CHHHHHHHHHTTCCEECTTHHH
T ss_pred             CCEEEEECCccCcCChhHHHhhcccCCC--------------C---------------CHHHHHHHHHcCCCCCCccHHH
Confidence            3599999999999975432111111111              1               1223334444445789999999


Q ss_pred             HHHHHHHCCCeEEEEcCCCH----HHHHHHH-HcCCCccc
Q 028799          163 LVKKLKANNKNVYLISGGFR----HMINILN-ILKWDVLK  197 (203)
Q Consensus       163 lL~~Lk~~G~~vaIVTn~~~----~~i~~ll-~lGL~~~~  197 (203)
                      +|+.|+++|++++|+||.+.    ..+...+ .+|++...
T Consensus       109 ll~~L~~~G~~i~ivTgR~~~~~r~~T~~~L~~lGi~~~~  148 (260)
T 3pct_A          109 FSNYVNANGGTMFFVSNRRDDVEKAGTVDDMKRLGFTGVN  148 (260)
T ss_dssp             HHHHHHHTTCEEEEEEEEETTTSHHHHHHHHHHHTCCCCS
T ss_pred             HHHHHHHCCCeEEEEeCCCccccHHHHHHHHHHcCcCccc
Confidence            99999999999999999864    5777788 99998643

>2yj3_A Copper-transporting ATPase; hydrolase, P-type ATPase, COPB, heavy metal translocation; 2.20A {Sulfolobus solfataricus} PDB: 2iye_A 2yj6_A* 2yj5_A* 2yj4_A*

Probab=98.01  E-value=5.9e-09  Score=87.44  Aligned_cols=45  Identities=18%  Similarity=0.277  Sum_probs=41.6

Q ss_pred             CCCCCcHHHHHHHHHHCCCeEEEEcCCCHHHHHHHH-HcCCCccce
Q 028799          154 PRLSPGIDELVKKLKANNKNVYLISGGFRHMINILN-ILKWDVLKV  198 (203)
Q Consensus       154 ~~l~PG~~elL~~Lk~~G~~vaIVTn~~~~~i~~ll-~lGL~~~~~  198 (203)
                      .+++||+.++|+.|+++|++++++||++...++.++ .+|++.++.
T Consensus       135 ~~~~~g~~~~l~~L~~~g~~~~i~T~~~~~~~~~~~~~~gl~~~f~  180 (263)
T 2yj3_A          135 DVPRPNLKDYLEKLKNEGLKIIILSGDKEDKVKELSKELNIQEYYS  180 (263)
Confidence            579999999999999999999999999999999999 999987654

>3n07_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; structural genomics, phosphatase, PSI-2, protein structure initiative; HET: MSE; 1.76A {Vibrio cholerae}

Probab=98.58  E-value=1.2e-08  Score=82.47  Aligned_cols=79  Identities=15%  Similarity=0.134  Sum_probs=56.6

Q ss_pred             HHHHhhccCCcEEEEECCCcccccchHHHHHHHcCCCccHHHHHHHHhCCCCCHHHHHHHHHhccCCCHHHHHHHHHhCC
Q 028799           74 KEVLQLWRTADAVCFDVDSTVCVDEGIDELAEFCGAGKAVAEWTARAMGGSVPFEEALAARLSLFKPSLSQVQDFLEKRP  153 (203)
Q Consensus        74 ~~~~~~~~~~kaVIFD~DGTLiDse~~~~la~~~G~~~~~~~~~~~~~gG~~~~~e~l~~~~~~~~~~~e~l~~~~~~~~  153 (203)
                      .++.+...++++++||+||||+|+..+.      .  .          .+            ...               
T Consensus        16 ~~~~~~~~~ik~vifD~DGtL~d~~~~~------~--~----------~~------------~~~---------------   50 (195)
T 3n07_A           16 PSLLEIAKQIKLLICDVDGVFSDGLIYM------G--N----------QG------------EEL---------------   50 (195)
T ss_dssp             HHHHHHHHTCCEEEECSTTTTSCSCCEE------C--T----------TS------------CEE---------------
T ss_pred             HHHHHHHhCCCEEEEcCCCCcCCCcEEE------c--c----------Cc------------hhh---------------
Confidence            4677788899999999999999964210      0  0          00            000               


Q ss_pred             CCCCCcHHHHHHHHHHCCCeEEEEcCCCHHHHHHHH-HcCCCccc
Q 028799          154 PRLSPGIDELVKKLKANNKNVYLISGGFRHMINILN-ILKWDVLK  197 (203)
Q Consensus       154 ~~l~PG~~elL~~Lk~~G~~vaIVTn~~~~~i~~ll-~lGL~~~~  197 (203)
                      ..+.+.-...|+.|+++|++++|+||++...++.++ .+|+..++
T Consensus        51 ~~~~~~d~~~l~~L~~~G~~~~ivT~~~~~~~~~~l~~lgi~~~~   95 (195)
T 3n07_A           51 KTFHTRDGYGVKALMNAGIEIAIITGRRSQIVENRMKALGISLIY   95 (195)
T ss_dssp             CCCCTTHHHHHHHHHHTTCEEEEECSSCCHHHHHHHHHTTCCEEE
T ss_pred             heeecccHHHHHHHHHCCCEEEEEECcCHHHHHHHHHHcCCcEEe
Confidence            011122223589999999999999999999999999 99998754

>3e8m_A Acylneuraminate cytidylyltransferase; 2-keto-3-deoxynononic acid 9-phosphate phosphohydrolase, nucleotidyltransferase; HET: PEG PG4 EDO PGE; 1.10A {Bacteroides thetaiotaomicron} PDB: 3e84_A 3e81_A*

Probab=98.53  E-value=1.4e-08  Score=78.18  Aligned_cols=36  Identities=17%  Similarity=0.046  Sum_probs=32.9

Q ss_pred             HHHHHHHCCCeEEEEcCCCHHHHHHHH-HcCCCccce
Q 028799          163 LVKKLKANNKNVYLISGGFRHMINILN-ILKWDVLKV  198 (203)
Q Consensus       163 lL~~Lk~~G~~vaIVTn~~~~~i~~ll-~lGL~~~~~  198 (203)
                      +|+.|+++|++++|+||++...++.++ .+|+..++.
T Consensus        39 ~l~~l~~~g~~~~i~T~~~~~~~~~~~~~~gl~~~~~   75 (164)
T 3e8m_A           39 GIFWAHNKGIPVGILTGEKTEIVRRRAEKLKVDYLFQ   75 (164)
T ss_dssp             HHHHHHHTTCCEEEECSSCCHHHHHHHHHTTCSEEEC
T ss_pred             HHHHHHHCCCEEEEEeCCChHHHHHHHHHcCCCEeec
Confidence            899999999999999999999999999 999987653

>3zvl_A Bifunctional polynucleotide phosphatase/kinase; hydrolase-transferase complex, base excision repair, BER, non-homologous END-joining, NHEJ; 1.65A {Mus musculus} PDB: 3zvm_A* 3zvn_A* 1yj5_A 3u7e_B* 3u7f_B* 3u7h_B* 3u7g_A*

Probab=98.50  E-value=1.7e-07  Score=83.95  Aligned_cols=45  Identities=13%  Similarity=0.192  Sum_probs=36.3

Q ss_pred             CCCcHHHHHHHHHHCCCeEEEEcCCC---------HH---HHHHHH-HcCCCccceEEec
Q 028799          156 LSPGIDELVKKLKANNKNVYLISGGF---------RH---MINILN-ILKWDVLKVIQIT  202 (203)
Q Consensus       156 l~PG~~elL~~Lk~~G~~vaIVTn~~---------~~---~i~~ll-~lGL~~~~~i~it  202 (203)
                      ++||+.++|+.|+++|++++|+||..         ..   .++.++ .+|+.  +..+++
T Consensus        88 ~~pgv~e~L~~L~~~G~~l~IvTN~~gi~~g~~~~~~~~~~~~~~l~~lgl~--fd~i~~  145 (416)
T 3zvl_A           88 LYPEIPKKLQELAAEGYKLVIFTNQMGIGRGKLPAEVFKGKVEAVLEKLGVP--FQVLVA  145 (416)
T ss_dssp             SCTTHHHHHHHHHHTTCEEEEEEECHHHHTTSSCHHHHHHHHHHHHHHHTSC--CEEEEE
T ss_pred             hcccHHHHHHHHHHCCCeEEEEeCCccccCCCCCHHHHHHHHHHHHHHcCCC--EEEEEE
Confidence            79999999999999999999999966         22   367778 99985  344443

>4fe3_A Cytosolic 5'-nucleotidase 3; substrate complex, HAD-like, protein binding; HET: U5P; 1.74A {Mus musculus} PDB: 2g09_A* 2bdu_A* 2g08_A 2g06_A* 2g0a_A* 2q4t_A* 2g07_A* 2jga_A 2vkq_A 2cn1_A

Probab=98.48  E-value=1.2e-06  Score=74.14  Aligned_cols=52  Identities=13%  Similarity=0.256  Sum_probs=45.3

Q ss_pred             HHHHHHHhCCCCCCCcHHHHHHHHHHCCCeEEEEcCCCHHHHHHHH-HcCCCc
Q 028799          144 QVQDFLEKRPPRLSPGIDELVKKLKANNKNVYLISGGFRHMINILN-ILKWDV  195 (203)
Q Consensus       144 ~l~~~~~~~~~~l~PG~~elL~~Lk~~G~~vaIVTn~~~~~i~~ll-~lGL~~  195 (203)
                      ...+++.....++.||+.++++.|+++|++++++|+++...+++++ .+|+..
T Consensus       130 ~~~~~v~~~~i~l~~g~~e~i~~l~~~gi~v~ivSgg~~~~i~~i~~~~g~~~  182 (297)
T 4fe3_A          130 KLKEIVADSDVMLKEGYENFFGKLQQHGIPVFIFSAGIGDVLEEVIRQAGVYH  182 (297)
T ss_dssp             GHHHHHHTSCCCBCBTHHHHHHHHHHTTCCEEEEEEEEHHHHHHHHHHTTCCC
T ss_pred             HHHHHHHhcCCCCCCcHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHHHcCCCc
Confidence            3444555556899999999999999999999999999999999999 999864

>1k1e_A Deoxy-D-mannose-octulosonate 8-phosphate phosphat; structural genomics, KDO 8-P phosphatase, structure function project, S2F; HET: MES; 1.67A {Haemophilus influenzae RD} SCOP: c.108.1.5 PDB: 1j8d_A*

Probab=98.47  E-value=6.2e-08  Score=76.35  Aligned_cols=41  Identities=15%  Similarity=-0.013  Sum_probs=35.8

Q ss_pred             CCcHHHHHHHHHHCCCeEEEEcCCCHHHHHHHH-HcCCCccc
Q 028799          157 SPGIDELVKKLKANNKNVYLISGGFRHMINILN-ILKWDVLK  197 (203)
Q Consensus       157 ~PG~~elL~~Lk~~G~~vaIVTn~~~~~i~~ll-~lGL~~~~  197 (203)
                      .+...++|+.|+++|++++|+||.+...++.++ .+|++.++
T Consensus        37 ~~~~~~~l~~L~~~G~~~~i~Tg~~~~~~~~~~~~lgl~~~~   78 (180)
T 1k1e_A           37 HVRDGLGIKMLMDADIQVAVLSGRDSPILRRRIADLGIKLFF   78 (180)
T ss_dssp             EHHHHHHHHHHHHTTCEEEEEESCCCHHHHHHHHHHTCCEEE
T ss_pred             ccchHHHHHHHHHCCCeEEEEeCCCcHHHHHHHHHcCCceee
Confidence            344558999999999999999999999999999 99998754

>3qgm_A P-nitrophenyl phosphatase (PHO2); structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 2.00A {Archaeoglobus fulgidus} SCOP: c.108.1.0

Probab=98.47  E-value=1.6e-07  Score=77.41  Aligned_cols=40  Identities=28%  Similarity=0.197  Sum_probs=32.8

Q ss_pred             CCCcHHHHHHHHHHCCCeEEEEcC---CCHHHHHHHH-HcCCCc
Q 028799          156 LSPGIDELVKKLKANNKNVYLISG---GFRHMINILN-ILKWDV  195 (203)
Q Consensus       156 l~PG~~elL~~Lk~~G~~vaIVTn---~~~~~i~~ll-~lGL~~  195 (203)
                      +.|++.+.|+.|+++|++++++||   .+...+...+ .+|++.
T Consensus        25 ~~~~~~~ai~~l~~~Gi~v~l~Tgr~~r~~~~~~~~l~~lg~~~   68 (268)
T 3qgm_A           25 PIPEGVEGVKKLKELGKKIIFVSNNSTRSRRILLERLRSFGLEV   68 (268)
T ss_dssp             ECHHHHHHHHHHHHTTCEEEEEECCSSSCHHHHHHHHHHTTCCC
T ss_pred             eCcCHHHHHHHHHHcCCeEEEEeCcCCCCHHHHHHHHHHCCCCC
Confidence            467889999999999999999999   4555666677 888864

>4gxt_A A conserved functionally unknown protein; structural genomics, PSI-biology; 1.82A {Anaerococcus prevotii}

Probab=98.40  E-value=1.9e-06  Score=76.64  Aligned_cols=39  Identities=18%  Similarity=0.326  Sum_probs=36.7

Q ss_pred             CCCCcHHHHHHHHHHCCCeEEEEcCCCHHHHHHHH-HcCC
Q 028799          155 RLSPGIDELVKKLKANNKNVYLISGGFRHMINILN-ILKW  193 (203)
Q Consensus       155 ~l~PG~~elL~~Lk~~G~~vaIVTn~~~~~i~~ll-~lGL  193 (203)
                      +++||+.+++++|+++|++++|||+++..+++++. .+|+
T Consensus       221 r~~p~~~eLi~~L~~~G~~v~IVSgg~~~~v~~ia~~lg~  260 (385)
T 4gxt_A          221 RTLDEMVDLYRSLEENGIDCYIVSASFIDIVRAFATDTNN  260 (385)
T ss_dssp             EECHHHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHCTTS
T ss_pred             eeCHHHHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHhCc
Confidence            37999999999999999999999999999999999 8765

>3n1u_A Hydrolase, HAD superfamily, subfamily III A; structural genomics, PSI-2; 1.80A {Legionella pneumophila} SCOP: c.108.1.0

Probab=98.39  E-value=7.9e-08  Score=76.91  Aligned_cols=36  Identities=17%  Similarity=0.018  Sum_probs=32.3

Q ss_pred             HHHHHHHCCCeEEEEcCCCHHHHHHHH-HcCCCccce
Q 028799          163 LVKKLKANNKNVYLISGGFRHMINILN-ILKWDVLKV  198 (203)
Q Consensus       163 lL~~Lk~~G~~vaIVTn~~~~~i~~ll-~lGL~~~~~  198 (203)
                      .|+.|+++|++++|+||++...++.++ .+|+..++.
T Consensus        54 ~l~~L~~~g~~~~ivTn~~~~~~~~~l~~lgl~~~~~   90 (191)
T 3n1u_A           54 GLKLLMAAGIQVAIITTAQNAVVDHRMEQLGITHYYK   90 (191)
T ss_dssp             HHHHHHHTTCEEEEECSCCSHHHHHHHHHHTCCEEEC
T ss_pred             HHHHHHHCCCeEEEEeCcChHHHHHHHHHcCCcccee
Confidence            588999999999999999999999999 999987543

>3pdw_A Uncharacterized hydrolase YUTF; structural genomics, PSI2, NYSGXRC, protein structure initia YORK SGX research center for structural genomics; 1.60A {Bacillus subtilis} SCOP: c.108.1.0

Probab=98.31  E-value=4e-07  Score=75.04  Aligned_cols=39  Identities=10%  Similarity=0.031  Sum_probs=29.9

Q ss_pred             CCcHHHHHHHHHHCCCeEEEEcC---CCHHHHHHHH-HcCCCc
Q 028799          157 SPGIDELVKKLKANNKNVYLISG---GFRHMINILN-ILKWDV  195 (203)
Q Consensus       157 ~PG~~elL~~Lk~~G~~vaIVTn---~~~~~i~~ll-~lGL~~  195 (203)
                      .|++.+.|+.|+++|++++++||   .+...+...+ .+|++.
T Consensus        24 ~~~~~~ai~~l~~~Gi~v~laTgrs~r~~~~~~~~l~~lg~~~   66 (266)
T 3pdw_A           24 IEEACEFVRTLKDRGVPYLFVTNNSSRTPKQVADKLVSFDIPA   66 (266)
T ss_dssp             HHHHHHHHHHHHHTTCCEEEEESCCSSCHHHHHHHHHHTTCCC
T ss_pred             CccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCC
Confidence            35667888999999999999998   4555566667 888853

>2hx1_A Predicted sugar phosphatases of the HAD superfamily; ZP_00311070.1, possible sugar phosphatase, structural genomics; HET: MSE EPE; 2.10A {Cytophaga hutchinsonii}

Probab=98.30  E-value=9.4e-07  Score=73.73  Aligned_cols=63  Identities=19%  Similarity=0.218  Sum_probs=51.2

Q ss_pred             HHhhccCCcEEEEECCCcccccchHHHHHHHcCCCccHHHHHHHHhCCCCCHHHHHHHHHhccCCCHHHHHHHHHhCCCC
Q 028799           76 VLQLWRTADAVCFDVDSTVCVDEGIDELAEFCGAGKAVAEWTARAMGGSVPFEEALAARLSLFKPSLSQVQDFLEKRPPR  155 (203)
Q Consensus        76 ~~~~~~~~kaVIFD~DGTLiDse~~~~la~~~G~~~~~~~~~~~~~gG~~~~~e~l~~~~~~~~~~~e~l~~~~~~~~~~  155 (203)
                      +.++..++++++||+||||++.+                                                        .
T Consensus         7 ~~~~~~~~k~i~~D~DGtL~~~~--------------------------------------------------------~   30 (284)
T 2hx1_A            7 FKSLLPKYKCIFFDAFGVLKTYN--------------------------------------------------------G   30 (284)
T ss_dssp             HHHHGGGCSEEEECSBTTTEETT--------------------------------------------------------E
T ss_pred             HHHHHhcCCEEEEcCcCCcCcCC--------------------------------------------------------e
Confidence            45667789999999999999832                                                        2


Q ss_pred             CCCcHHHHHHHHHHCCCeEEEEcC---CCHHHHHHHH-HcCCC
Q 028799          156 LSPGIDELVKKLKANNKNVYLISG---GFRHMINILN-ILKWD  194 (203)
Q Consensus       156 l~PG~~elL~~Lk~~G~~vaIVTn---~~~~~i~~ll-~lGL~  194 (203)
                      ++|++.+.|+.|+++|++++++||   .....+...+ .+|++
T Consensus        31 ~~~~~~~~l~~l~~~g~~~~~~Tn~~~r~~~~~~~~l~~lg~~   73 (284)
T 2hx1_A           31 LLPGIENTFDYLKAQGQDYYIVTNDASRSPEQLADSYHKLGLF   73 (284)
T ss_dssp             ECTTHHHHHHHHHHTTCEEEEEECCCSSCHHHHHHHHHHTTCT
T ss_pred             eChhHHHHHHHHHHCCCEEEEEeCCCCcCHHHHHHHHHHCCcC
Confidence            468888999999999999999998   4556666667 88887

>2r8e_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; YRBI, divalent metal, HAD superfamily, KDO 8-P, hydrolase; 1.40A {Escherichia coli O6} PDB: 2r8x_A 2r8y_A 2r8z_A 3hyc_A 3i6b_A*

Probab=98.28  E-value=2.3e-07  Score=73.60  Aligned_cols=35  Identities=14%  Similarity=0.088  Sum_probs=31.9

Q ss_pred             HHHHHHHCCCeEEEEcCCCHHHHHHHH-HcCCCccc
Q 028799          163 LVKKLKANNKNVYLISGGFRHMINILN-ILKWDVLK  197 (203)
Q Consensus       163 lL~~Lk~~G~~vaIVTn~~~~~i~~ll-~lGL~~~~  197 (203)
                      +|+.|+++|++++|+||++...++.++ .+|+..++
T Consensus        61 ~l~~L~~~g~~v~ivT~~~~~~~~~~l~~lgl~~~~   96 (188)
T 2r8e_A           61 GIRCALTSDIEVAIITGRKAKLVEDRCATLGITHLY   96 (188)
T ss_dssp             HHHHHHTTTCEEEEECSSCCHHHHHHHHHHTCCEEE
T ss_pred             HHHHHHHCCCeEEEEeCCChHHHHHHHHHcCCceee
Confidence            899999999999999999999999999 99987654

>4dw8_A Haloacid dehalogenase-like hydrolase; HAD, putative phosphatase, enzyme function initiative, EFI, structural genomics; 1.50A {Bacteroides thetaiotaomicron} PDB: 3niw_A 4dwo_A

Probab=98.24  E-value=2.1e-06  Score=71.09  Aligned_cols=39  Identities=21%  Similarity=0.170  Sum_probs=33.3

Q ss_pred             CCCcHHHHHHHHHHCCCeEEEEcCCCHHHHHHHH-HcCCC
Q 028799          156 LSPGIDELVKKLKANNKNVYLISGGFRHMINILN-ILKWD  194 (203)
Q Consensus       156 l~PG~~elL~~Lk~~G~~vaIVTn~~~~~i~~ll-~lGL~  194 (203)
                      +.+...+.|+.++++|++++++|+.+...+..++ .+|++
T Consensus        23 i~~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~   62 (279)
T 4dw8_A           23 ISSRNRETLIRIQEQGIRLVLASGRPTYGIVPLANELRMN   62 (279)
T ss_dssp             CCHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTGG
T ss_pred             cCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHhCCC
Confidence            3455677888999999999999999999998888 88874

>3mpo_A Predicted hydrolase of the HAD superfamily; SGX, PSI, structural genomics, protein structure initiative; 2.90A {Lactobacillus brevis} SCOP: c.108.1.0

Probab=98.23  E-value=1.8e-06  Score=71.50  Aligned_cols=38  Identities=18%  Similarity=0.080  Sum_probs=32.3

Q ss_pred             CcHHHHHHHHHHCCCeEEEEcCCCHHHHHHHH-HcCCCc
Q 028799          158 PGIDELVKKLKANNKNVYLISGGFRHMINILN-ILKWDV  195 (203)
Q Consensus       158 PG~~elL~~Lk~~G~~vaIVTn~~~~~i~~ll-~lGL~~  195 (203)
                      +...+.|+.++++|++++++|+.+...+..++ .+|+..
T Consensus        25 ~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~   63 (279)
T 3mpo_A           25 QATIDAVQAAKAQGIKVVLCTGRPLTGVQPYLDAMDIDG   63 (279)
T ss_dssp             HHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCCS
T ss_pred             HHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCC
Confidence            44567788889999999999999999998888 888864

>3epr_A Hydrolase, haloacid dehalogenase-like family; structural genomics, unknown function, HAD superfamily hydro PSI-2; 1.55A {Streptococcus agalactiae serogroup V} SCOP: c.108.1.14 PDB: 1ys9_A 1wvi_A 1ydf_A

Probab=98.18  E-value=1.2e-06  Score=72.49  Aligned_cols=39  Identities=8%  Similarity=0.164  Sum_probs=30.9

Q ss_pred             CcHHHHHHHHHHCCCeEEEEcC---CCHHHHHHHH-HcCCCcc
Q 028799          158 PGIDELVKKLKANNKNVYLISG---GFRHMINILN-ILKWDVL  196 (203)
Q Consensus       158 PG~~elL~~Lk~~G~~vaIVTn---~~~~~i~~ll-~lGL~~~  196 (203)
                      |++.+.|+.++++|++++++||   .+...+...+ .+|+...
T Consensus        24 ~~~~eal~~l~~~G~~vvl~Tn~~gr~~~~~~~~l~~lg~~~~   66 (264)
T 3epr_A           24 PAGERFIERLQEKGIPYMLVTNNTTRTPESVQEMLRGFNVETP   66 (264)
T ss_dssp             HHHHHHHHHHHHHTCCEEEEECCCSSCHHHHHHHHHTTTCCCC
T ss_pred             cCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHCCCCCC
Confidence            7888999999999999999995   4455566667 8888643

>2oyc_A PLP phosphatase, pyridoxal phosphate phosphatase; structural genomics, NYSGXRC, NEW YORK SGX research center for structural genomics, PSI-2; 1.72A {Homo sapiens} PDB: 2p27_A 2p69_A* 2cft_A* 2cfs_A 2cfr_A*

Probab=98.17  E-value=2.3e-06  Score=72.41  Aligned_cols=70  Identities=24%  Similarity=0.353  Sum_probs=55.0

Q ss_pred             CCCChHHHHhhccCCcEEEEECCCcccccchHHHHHHHcCCCccHHHHHHHHhCCCCCHHHHHHHHHhccCCCHHHHHHH
Q 028799           69 NTLPSKEVLQLWRTADAVCFDVDSTVCVDEGIDELAEFCGAGKAVAEWTARAMGGSVPFEEALAARLSLFKPSLSQVQDF  148 (203)
Q Consensus        69 ~~~~~~~~~~~~~~~kaVIFD~DGTLiDse~~~~la~~~G~~~~~~~~~~~~~gG~~~~~e~l~~~~~~~~~~~e~l~~~  148 (203)
                      ..++.+++.++..++++++||+||||++++                                                  
T Consensus         7 ~~~~~~~~~~~~~~~k~i~~D~DGTL~~~~--------------------------------------------------   36 (306)
T 2oyc_A            7 ERLRGAALRDVLGRAQGVLFDCDGVLWNGE--------------------------------------------------   36 (306)
T ss_dssp             EECCHHHHHHHHHHCSEEEECSBTTTEETT--------------------------------------------------
T ss_pred             hcCCHHHHHHHHhhCCEEEECCCCcEecCC--------------------------------------------------
Confidence            345667788888899999999999998731                                                  


Q ss_pred             HHhCCCCCCCcHHHHHHHHHHCCCeEEEEcC---CCHHHHHHHH-HcCCC
Q 028799          149 LEKRPPRLSPGIDELVKKLKANNKNVYLISG---GFRHMINILN-ILKWD  194 (203)
Q Consensus       149 ~~~~~~~l~PG~~elL~~Lk~~G~~vaIVTn---~~~~~i~~ll-~lGL~  194 (203)
                            .++|++.+.++.|+++|++++++||   .....+...+ .+|++
T Consensus        37 ------~~~~~~~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~~~~~~g~~   80 (306)
T 2oyc_A           37 ------RAVPGAPELLERLARAGKAALFVSNNSRRARPELALRFARLGFG   80 (306)
T ss_dssp             ------EECTTHHHHHHHHHHTTCEEEEEECCCSSCHHHHHHHHHHTTCC
T ss_pred             ------ccCcCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHhcCCC
Confidence                  1357788899999999999999997   4455555666 88876

>2o2x_A Hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; 1.50A {Mesorhizobium loti} SCOP: c.108.1.19

Probab=98.17  E-value=1.4e-06  Score=70.22  Aligned_cols=41  Identities=10%  Similarity=-0.100  Sum_probs=37.2

Q ss_pred             CCCCCcHHHHHHHHHHCCCeEEEEcCCCH---------------HHHHHHH-HcCCC
Q 028799          154 PRLSPGIDELVKKLKANNKNVYLISGGFR---------------HMINILN-ILKWD  194 (203)
Q Consensus       154 ~~l~PG~~elL~~Lk~~G~~vaIVTn~~~---------------~~i~~ll-~lGL~  194 (203)
                      .+++||+.++|+.|+++|++++|+||++.               ..++..+ .+|+.
T Consensus        55 ~~~~~g~~e~L~~L~~~G~~~~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~  111 (218)
T 2o2x_A           55 IVLRPQMLPAIATANRAGIPVVVVTNQSGIARGYFGWSAFAAVNGRVLELLREEGVF  111 (218)
T ss_dssp             CCBCGGGHHHHHHHHHHTCCEEEEEECHHHHTTSCCHHHHHHHHHHHHHHHHHTTCC
T ss_pred             CeECcCHHHHHHHHHHCCCEEEEEcCcCCCCcccccHHHHHHHHHHHHHHHHHcCCc
Confidence            47899999999999999999999999998               6778888 98975

>3gyg_A NTD biosynthesis operon putative hydrolase NTDB; PF05116, PF08282, MCSG, PSI-2, haloacid dehalogenase-like HY structural genomics; 2.45A {Bacillus subtilis subsp}

Probab=98.11  E-value=3.4e-06  Score=70.47  Aligned_cols=43  Identities=19%  Similarity=0.003  Sum_probs=35.6

Q ss_pred             CCCCcHHHHHHHHHHC-CCeEEEEcCC---------------------CHHHHHHHH-HcCCCccc
Q 028799          155 RLSPGIDELVKKLKAN-NKNVYLISGG---------------------FRHMINILN-ILKWDVLK  197 (203)
Q Consensus       155 ~l~PG~~elL~~Lk~~-G~~vaIVTn~---------------------~~~~i~~ll-~lGL~~~~  197 (203)
                      ..+|++.++++.++++ |+++++.|+.                     ....+..++ .+|+..++
T Consensus       122 ~~~~~v~e~l~~l~~~~g~~l~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~  187 (289)
T 3gyg_A          122 FSKEKVEKLVKQLHENHNILLNPQTQLGKSRYKHNFYYQEQDEINDKKNLLAIEKICEEYGVSVNI  187 (289)
T ss_dssp             CCHHHHHHHHHHHHHHSSCCCEEGGGTCGGGTTCCEEEECCCHHHHHHHHHHHHHHHHHHTEEEEE
T ss_pred             CCHHHHHHHHHHHHhhhCceeeecccccccceEEEEEEeccccccchHHHHHHHHHHHHcCCCEEE
Confidence            6789999999999988 9999999987                     556677777 88886544

>3kc2_A Uncharacterized protein YKR070W; HAD-like, mitochondral protein, PSI, MCSG, structural genomi protein structure initiative; HET: MSE; 1.55A {Saccharomyces cerevisiae} PDB: 3rf6_A*

Probab=98.11  E-value=3.8e-06  Score=73.88  Aligned_cols=72  Identities=24%  Similarity=0.267  Sum_probs=52.0

Q ss_pred             HHhhccCCcEEEEECCCcccccchHHHHHHHcCCCccHHHHHHHHhCCCCCHHHHHHHHHhccCCCHHHHHHHHHhCCCC
Q 028799           76 VLQLWRTADAVCFDVDSTVCVDEGIDELAEFCGAGKAVAEWTARAMGGSVPFEEALAARLSLFKPSLSQVQDFLEKRPPR  155 (203)
Q Consensus        76 ~~~~~~~~kaVIFD~DGTLiDse~~~~la~~~G~~~~~~~~~~~~~gG~~~~~e~l~~~~~~~~~~~e~l~~~~~~~~~~  155 (203)
                      .++...+.++++||+||||++.                                                        ..
T Consensus         6 ~~~~~~~~~~~l~D~DGvl~~g--------------------------------------------------------~~   29 (352)
T 3kc2_A            6 FFQTTSKKIAFAFDIDGVLFRG--------------------------------------------------------KK   29 (352)
T ss_dssp             ------CCEEEEECCBTTTEET--------------------------------------------------------TE
T ss_pred             HhhhhccCCEEEEECCCeeEcC--------------------------------------------------------Ce
Confidence            4555668899999999999871                                                        13


Q ss_pred             CCCcHHHHHHHHHHCCCeEEEEcCCC----HHHHHHHH-HcCCCccceEEecC
Q 028799          156 LSPGIDELVKKLKANNKNVYLISGGF----RHMINILN-ILKWDVLKVIQITS  203 (203)
Q Consensus       156 l~PG~~elL~~Lk~~G~~vaIVTn~~----~~~i~~ll-~lGL~~~~~i~it~  203 (203)
                      +.||+.+.|+.|++.|++++++||+.    ...++.+. .+|++.-..-++||
T Consensus        30 ~~p~a~~~l~~l~~~g~~~~~vTNn~~~~~~~~~~~l~~~lgi~~~~~~i~ts   82 (352)
T 3kc2_A           30 PIAGASDALKLLNRNKIPYILLTNGGGFSERARTEFISSKLDVDVSPLQIIQS   82 (352)
T ss_dssp             ECTTHHHHHHHHHHTTCCEEEECSCCSSCHHHHHHHHHHHHTSCCCGGGEECT
T ss_pred             eCcCHHHHHHHHHHCCCEEEEEeCCCCCCchHHHHHHHHhcCCCCChhhEeeh
Confidence            57999999999999999999999986    44455666 68987554445554

>3fzq_A Putative hydrolase; YP_001086940.1, putative haloacid dehalogenase-like hydrolas structural genomics, joint center for structural genomics; HET: MSE; 2.10A {Clostridium difficile} SCOP: c.108.1.0

Probab=98.08  E-value=2.2e-06  Score=70.42  Aligned_cols=18  Identities=17%  Similarity=0.263  Sum_probs=15.6

Q ss_pred             cCCcEEEEECCCcccccc
Q 028799           81 RTADAVCFDVDSTVCVDE   98 (203)
Q Consensus        81 ~~~kaVIFD~DGTLiDse   98 (203)
                      .|+|+++|||||||+|++
T Consensus         3 ~M~kli~fDlDGTLl~~~   20 (274)
T 3fzq_A            3 KLYKLLILDIDGTLRDEV   20 (274)
T ss_dssp             -CCCEEEECSBTTTBBTT
T ss_pred             CcceEEEEECCCCCCCCC
Confidence            468999999999999975

>3dao_A Putative phosphatse; structural genomics, joint center for S genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: MSE 1PE CIT; 1.80A {Eubacterium rectale}

Probab=98.07  E-value=5.1e-06  Score=69.47  Aligned_cols=64  Identities=17%  Similarity=0.127  Sum_probs=47.6

Q ss_pred             HhhccCCcEEEEECCCcccccchHHHHHHHcCCCccHHHHHHHHhCCCCCHHHHHHHHHhccCCCHHHHHHHHHhCCCCC
Q 028799           77 LQLWRTADAVCFDVDSTVCVDEGIDELAEFCGAGKAVAEWTARAMGGSVPFEEALAARLSLFKPSLSQVQDFLEKRPPRL  156 (203)
Q Consensus        77 ~~~~~~~kaVIFD~DGTLiDse~~~~la~~~G~~~~~~~~~~~~~gG~~~~~e~l~~~~~~~~~~~e~l~~~~~~~~~~l  156 (203)
                      +-.+.++|+++|||||||+|++.                                                      -.+
T Consensus        15 ~~~~~~~kli~~DlDGTLl~~~~------------------------------------------------------~~i   40 (283)
T 3dao_A           15 LYFQGMIKLIATDIDGTLVKDGS------------------------------------------------------LLI   40 (283)
T ss_dssp             ----CCCCEEEECCBTTTBSTTC------------------------------------------------------SCC
T ss_pred             hhhccCceEEEEeCcCCCCCCCC------------------------------------------------------CcC
Confidence            33467889999999999998642                                                      023


Q ss_pred             CCcHHHHHHHHHHCCCeEEEEcCCCHHHHHHHH-HcCCC
Q 028799          157 SPGIDELVKKLKANNKNVYLISGGFRHMINILN-ILKWD  194 (203)
Q Consensus       157 ~PG~~elL~~Lk~~G~~vaIVTn~~~~~i~~ll-~lGL~  194 (203)
                      .+...+.|+.|+++|++++++|+.+...+..++ .+++.
T Consensus        41 ~~~~~~al~~l~~~G~~v~iaTGR~~~~~~~~~~~l~~~   79 (283)
T 3dao_A           41 DPEYMSVIDRLIDKGIIFVVCSGRQFSSEFKLFAPIKHK   79 (283)
T ss_dssp             CHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHTGGGGGG
T ss_pred             CHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCC
Confidence            345567778888899999999999988888887 77664

>3dnp_A Stress response protein YHAX; structural PSI-2, protein structure initiative, midwest center for STR genomics, MCSG, unknown function; HET: MSE; 1.85A {Bacillus subtilis} SCOP: c.108.1.0

Probab=98.07  E-value=7.8e-06  Score=67.95  Aligned_cols=38  Identities=16%  Similarity=0.190  Sum_probs=31.0

Q ss_pred             CcHHHHHHHHHHCCCeEEEEcCCCHHHHHHHH-HcCCCc
Q 028799          158 PGIDELVKKLKANNKNVYLISGGFRHMINILN-ILKWDV  195 (203)
Q Consensus       158 PG~~elL~~Lk~~G~~vaIVTn~~~~~i~~ll-~lGL~~  195 (203)
                      +...+.|+.++++|++++++|+.+...+..++ .+|++.
T Consensus        26 ~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~~~~~~   64 (290)
T 3dnp_A           26 QATKDAIEYVKKKGIYVTLVTNRHFRSAQKIAKSLKLDA   64 (290)
T ss_dssp             HHHHHHHHHHHHTTCEEEEBCSSCHHHHHHHHHHTTCCS
T ss_pred             HHHHHHHHHHHHCCCEEEEECCCChHHHHHHHHHcCCCC
Confidence            34566777888899999999999988888888 888873

>2obb_A Hypothetical protein; structural genomics, PSI-2, PR structure initiative, midwest center for structural genomic unknown function; 2.20A {Bacteroides thetaiotaomicron} SCOP: c.108.1.25

Probab=98.05  E-value=1e-05  Score=62.59  Aligned_cols=40  Identities=15%  Similarity=-0.081  Sum_probs=32.1

Q ss_pred             CCCcHHHHHHHHHHCCCeEEEEcCCC---HHHHHHHH-HcCCCc
Q 028799          156 LSPGIDELVKKLKANNKNVYLISGGF---RHMINILN-ILKWDV  195 (203)
Q Consensus       156 l~PG~~elL~~Lk~~G~~vaIVTn~~---~~~i~~ll-~lGL~~  195 (203)
                      +.|++.+.|+.|+++|++++|+|+.+   ...+...+ .+|++.
T Consensus        25 ~~~~~~~al~~l~~~G~~iii~TgR~~~~~~~~~~~l~~~gi~~   68 (142)
T 2obb_A           25 EIPFAVETLKLLQQEKHRLILWSVREGELLDEAIEWCRARGLEF   68 (142)
T ss_dssp             BCTTHHHHHHHHHHTTCEEEECCSCCHHHHHHHHHHHHTTTCCC
T ss_pred             cCHHHHHHHHHHHHCCCEEEEEeCCCcccHHHHHHHHHHcCCCe
Confidence            46799999999999999999999987   33445556 777754

>3pgv_A Haloacid dehalogenase-like hydrolase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: EPE; 2.39A {Klebsiella pneumoniae subsp}

Probab=98.03  E-value=6.5e-06  Score=68.82  Aligned_cols=38  Identities=18%  Similarity=0.105  Sum_probs=29.5

Q ss_pred             cHHHHHHHHHHCCCeEEEEcCCCHHHHHHHH-HcCCCcc
Q 028799          159 GIDELVKKLKANNKNVYLISGGFRHMINILN-ILKWDVL  196 (203)
Q Consensus       159 G~~elL~~Lk~~G~~vaIVTn~~~~~i~~ll-~lGL~~~  196 (203)
                      ...+.|+.++++|++++++|+.+...+..++ .+|++.+
T Consensus        42 ~~~~al~~l~~~G~~v~iaTGR~~~~~~~~~~~l~~~~~   80 (285)
T 3pgv_A           42 YAKETLKLLTARGINFVFATGRHYIDVGQIRDNLGIRSY   80 (285)
T ss_dssp             HHHHHHHHHHTTTCEEEEECSSCGGGGHHHHHHHCSCCE
T ss_pred             HHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHhcCCCcc
Confidence            3456667778889999999998888888888 8887643

>2c4n_A Protein NAGD; nucleotide phosphatase, HAD superfamily, UMP phosphatase, carbohydrate metabolism, hydrolase; 1.8A {Escherichia coli} SCOP: c.108.1.14

Probab=97.99  E-value=3.1e-06  Score=67.28  Aligned_cols=89  Identities=13%  Similarity=0.055  Sum_probs=48.0

Q ss_pred             CCcEEEEECCCcccccch-------HHHHHHHcCCCccHHHHHHHHhCCCCCHHHHHHHHHhc-cCCC------H-HHHH
Q 028799           82 TADAVCFDVDSTVCVDEG-------IDELAEFCGAGKAVAEWTARAMGGSVPFEEALAARLSL-FKPS------L-SQVQ  146 (203)
Q Consensus        82 ~~kaVIFD~DGTLiDse~-------~~~la~~~G~~~~~~~~~~~~~gG~~~~~e~l~~~~~~-~~~~------~-e~l~  146 (203)
                      ++|+|+|||||||+|++.       +...++..|......   .. ..| .+..+........ +...      . ....
T Consensus         2 ~~k~i~fDlDGTLl~~~~~~~~~~~~~~~l~~~g~~~~~~---t~-~~g-~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~   76 (250)
T 2c4n_A            2 TIKNVICDIDGVLMHDNVAVPGAAEFLHGIMDKGLPLVLL---TN-YPS-QTGQDLANRFATAGVDVPDSVFYTSAMATA   76 (250)
T ss_dssp             CCCEEEEECBTTTEETTEECTTHHHHHHHHHHTTCCEEEE---ES-CCS-CCHHHHHHHHHHTTCCCCGGGEEEHHHHHH
T ss_pred             CccEEEEcCcceEEeCCEeCcCHHHHHHHHHHcCCcEEEE---EC-CCC-CCHHHHHHHHHHcCCCCCHHHeEcHHHHHH
Confidence            479999999999999864       122233556542210   00 001 1222222221111 0001      1 1122


Q ss_pred             HHHHh--CCCCCCCcHHHHHHHHHHCCCeEE
Q 028799          147 DFLEK--RPPRLSPGIDELVKKLKANNKNVY  175 (203)
Q Consensus       147 ~~~~~--~~~~l~PG~~elL~~Lk~~G~~va  175 (203)
                      .+.+.  ....++||+.++++.|++.|++++
T Consensus        77 ~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~  107 (250)
T 2c4n_A           77 DFLRRQEGKKAYVVGEGALIHELYKAGFTIT  107 (250)
T ss_dssp             HHHHTSSCCEEEEECCTHHHHHHHHTTCEEC
T ss_pred             HHHHhcCCCEEEEEcCHHHHHHHHHcCCccc
Confidence            23322  135688999999999999999999

>1wr8_A Phosphoglycolate phosphatase; alpha / beta core domain, HAD superfamily, structural genomi structural genomics/proteomics initiative, RSGI; 1.60A {Pyrococcus horikoshii} SCOP: c.108.1.10

Probab=97.95  E-value=1.7e-05  Score=64.38  Aligned_cols=37  Identities=8%  Similarity=0.135  Sum_probs=29.3

Q ss_pred             cHHHHHHHHHHCCCeEEEEcCCCHHHHHHHH-HcCCCc
Q 028799          159 GIDELVKKLKANNKNVYLISGGFRHMINILN-ILKWDV  195 (203)
Q Consensus       159 G~~elL~~Lk~~G~~vaIVTn~~~~~i~~ll-~lGL~~  195 (203)
                      ...+.|+.|+++|++++++|+.+...+..++ .+|++.
T Consensus        24 ~~~~al~~l~~~G~~v~i~TGR~~~~~~~~~~~l~~~~   61 (231)
T 1wr8_A           24 KALEAIRRAESLGIPIMLVTGNTVQFAEAASILIGTSG   61 (231)
T ss_dssp             HHHHHHHHHHHTTCCEEEECSSCHHHHHHHHHHHTCCS
T ss_pred             HHHHHHHHHHHCCCEEEEEcCCChhHHHHHHHHcCCCC
Confidence            3466677778889999999999888888877 778754

>1nrw_A Hypothetical protein, haloacid dehalogenase-like hydrolase; structural genomics, PSI, protein structure initiative; 1.70A {Bacillus subtilis} SCOP: c.108.1.10

Probab=97.93  E-value=1.5e-05  Score=66.77  Aligned_cols=35  Identities=9%  Similarity=0.116  Sum_probs=26.1

Q ss_pred             HHHHHHHHHCCCeEEEEcCCCHHHHHHHH-HcCCCc
Q 028799          161 DELVKKLKANNKNVYLISGGFRHMINILN-ILKWDV  195 (203)
Q Consensus       161 ~elL~~Lk~~G~~vaIVTn~~~~~i~~ll-~lGL~~  195 (203)
                      .+.++.|+++|++++++|+.+...+..++ .+|++.
T Consensus        27 ~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~   62 (288)
T 1nrw_A           27 ENALRQAQRDGIEVVVSTGRAHFDVMSIFEPLGIKT   62 (288)
T ss_dssp             HHHHHHHHHTTCEEEEECSSCHHHHHHHHGGGTCCC
T ss_pred             HHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCCC
Confidence            44555667788888888888888877777 777754

>1xpj_A Hypothetical protein; structural genomics, MCSG, protein STR initiative, PSI, midwest center for structural genomics, UN function; HET: TLA; 2.30A {Vibrio cholerae} SCOP: c.108.1.18

Probab=97.89  E-value=1.2e-05  Score=60.11  Aligned_cols=28  Identities=4%  Similarity=-0.060  Sum_probs=24.8

Q ss_pred             CCCCcHHHHHHHHHHCCCeEEEEcCCCH
Q 028799          155 RLSPGIDELVKKLKANNKNVYLISGGFR  182 (203)
Q Consensus       155 ~l~PG~~elL~~Lk~~G~~vaIVTn~~~  182 (203)
                      .+.|++.+.++.|+++|++++++||.+.
T Consensus        24 ~~~~~~~~~l~~l~~~Gi~~~iaTGR~~   51 (126)
T 1xpj_A           24 LPRLDVIEQLREYHQLGFEIVISTARNM   51 (126)
T ss_dssp             CBCHHHHHHHHHHHHTTCEEEEEECTTT
T ss_pred             CCCHHHHHHHHHHHhCCCeEEEEeCCCh
Confidence            5678889999999999999999999875

>2ho4_A Haloacid dehalogenase-like hydrolase domain containing 2; HDHD2, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; 2.20A {Mus musculus} PDB: 3hlt_A

Probab=97.86  E-value=3.3e-05  Score=62.47  Aligned_cols=16  Identities=31%  Similarity=0.505  Sum_probs=14.1

Q ss_pred             cCCcEEEEECCCcccc
Q 028799           81 RTADAVCFDVDSTVCV   96 (203)
Q Consensus        81 ~~~kaVIFD~DGTLiD   96 (203)
                      .++++|+|||||||+|
T Consensus         5 ~~ik~i~fDlDGTLld   20 (259)
T 2ho4_A            5 RALKAVLVDLNGTLHI   20 (259)
T ss_dssp             -CCCEEEEESSSSSCC
T ss_pred             hhCCEEEEeCcCcEEe
Confidence            4689999999999998

>3l7y_A Putative uncharacterized protein SMU.1108C; hydrolase; 2.00A {Streptococcus mutans}

Probab=97.84  E-value=1.3e-05  Score=67.60  Aligned_cols=33  Identities=9%  Similarity=0.005  Sum_probs=24.2

Q ss_pred             HHHHHHHHHCCCeEEEEcCCCHHHHHHHH-HcCC
Q 028799          161 DELVKKLKANNKNVYLISGGFRHMINILN-ILKW  193 (203)
Q Consensus       161 ~elL~~Lk~~G~~vaIVTn~~~~~i~~ll-~lGL  193 (203)
                      .+.|+.++++|++++++|+.+...+..++ .+++
T Consensus        61 ~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~   94 (304)
T 3l7y_A           61 QRILKQLQERDIRFVVASSNPYRQLREHFPDCHE   94 (304)
T ss_dssp             HHHHHHHHHTTCEEEEECSSCHHHHHTTCTTTGG
T ss_pred             HHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHhCC
Confidence            45666667788888888888877776666 5555

>1rkq_A Hypothetical protein YIDA; two domain structure with beta-alpha sandwich. stucture contains A magnesium ION., PSI, protein structure initiative; 1.40A {Escherichia coli} SCOP: c.108.1.10

Probab=97.83  E-value=2.3e-05  Score=65.57  Aligned_cols=35  Identities=17%  Similarity=0.123  Sum_probs=29.6

Q ss_pred             HHHHHHHHHCCCeEEEEcCCCHHHHHHHH-HcCCCc
Q 028799          161 DELVKKLKANNKNVYLISGGFRHMINILN-ILKWDV  195 (203)
Q Consensus       161 ~elL~~Lk~~G~~vaIVTn~~~~~i~~ll-~lGL~~  195 (203)
                      .+.|+.|+++|++++++|+.+...+..++ .++++.
T Consensus        28 ~~aL~~l~~~Gi~vviaTGR~~~~~~~~~~~l~l~~   63 (282)
T 1rkq_A           28 KNAIAAARARGVNVVLTTGRPYAGVHNYLKELHMEQ   63 (282)
T ss_dssp             HHHHHHHHHTTCEEEEECSSCGGGTHHHHHHTTCCS
T ss_pred             HHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHhCCCC
Confidence            46777888899999999999988888888 888864

>3f9r_A Phosphomannomutase; trypanosome glycobiology structural genomics, isomerase, structural genomics consortium, SGC; 1.85A {Trypanosoma brucei} SCOP: c.108.1.0 PDB: 2i54_A* 2i55_A*

Probab=97.80  E-value=3.3e-05  Score=63.97  Aligned_cols=30  Identities=13%  Similarity=0.031  Sum_probs=24.0

Q ss_pred             CcHHHHHHHHHHCCCeEEEEcCCCHHHHHH
Q 028799          158 PGIDELVKKLKANNKNVYLISGGFRHMINI  187 (203)
Q Consensus       158 PG~~elL~~Lk~~G~~vaIVTn~~~~~i~~  187 (203)
                      |...+.|+.|+++|++++|+|+.+...+..
T Consensus        24 ~~~~~~l~~l~~~g~~~~iaTGR~~~~~~~   53 (246)
T 3f9r_A           24 DEMRALIKRARGAGFCVGTVGGSDFAKQVE   53 (246)
T ss_dssp             HHHHHHHHHHHHTTCEEEEECSSCHHHHHH
T ss_pred             HHHHHHHHHHHHCCCEEEEECCCCHHHHHH
Confidence            444566899999999999999999885444

>2pq0_A Hypothetical conserved protein GK1056; hyopthetical protein, structural genomics, unknown function; 2.60A {Geobacillus kaustophilus} PDB: 2qyh_A

Probab=97.80  E-value=2.3e-05  Score=64.16  Aligned_cols=17  Identities=29%  Similarity=0.487  Sum_probs=15.0

Q ss_pred             CCcEEEEECCCcccccc
Q 028799           82 TADAVCFDVDSTVCVDE   98 (203)
Q Consensus        82 ~~kaVIFD~DGTLiDse   98 (203)
                      ++|+|+|||||||+|++
T Consensus         2 ~~kli~~DlDGTLl~~~   18 (258)
T 2pq0_A            2 GRKIVFFDIDGTLLDEQ   18 (258)
T ss_dssp             CCCEEEECTBTTTBCTT
T ss_pred             CceEEEEeCCCCCcCCC
Confidence            46899999999999975

>1xvi_A MPGP, YEDP, putative mannosyl-3-phosphoglycerate phosphatase; hypothetical protein, conserved protein, phophatase-like domain; HET: 1PE PG4 PGE; 2.26A {Escherichia coli K12} SCOP: c.108.1.10

Probab=97.78  E-value=4.4e-05  Score=63.82  Aligned_cols=36  Identities=19%  Similarity=0.136  Sum_probs=31.8

Q ss_pred             HHHHHHHHHHCCCeEEEEcCCCHHHHHHHH-HcCCCc
Q 028799          160 IDELVKKLKANNKNVYLISGGFRHMINILN-ILKWDV  195 (203)
Q Consensus       160 ~~elL~~Lk~~G~~vaIVTn~~~~~i~~ll-~lGL~~  195 (203)
                      ..+.|+.|+++|++++|+|+.+...+..++ .+|++.
T Consensus        31 ~~~~l~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~   67 (275)
T 1xvi_A           31 AAPWLTRLREANVPVILCSSKTSAEMLYLQKTLGLQG   67 (275)
T ss_dssp             THHHHHHHHHTTCCEEEECSSCHHHHHHHHHHTTCTT
T ss_pred             HHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCCC
Confidence            477888889999999999999999999988 888864

>3r4c_A Hydrolase, haloacid dehalogenase-like hydrolase; haloalkanoate dehalogenase enzyme superfamily, phosphohydrol hydrolase; 1.82A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0

Probab=97.78  E-value=1.3e-05  Score=65.88  Aligned_cols=36  Identities=11%  Similarity=0.123  Sum_probs=22.7

Q ss_pred             CCcHHHHHHHHHHCCCeEEEEcCCCHHHHHHHH-HcCC
Q 028799          157 SPGIDELVKKLKANNKNVYLISGGFRHMINILN-ILKW  193 (203)
Q Consensus       157 ~PG~~elL~~Lk~~G~~vaIVTn~~~~~i~~ll-~lGL  193 (203)
                      .+...+.|+.++++|++++++|+.+...+ ..+ .+++
T Consensus        32 ~~~~~~al~~l~~~G~~~~iaTGR~~~~~-~~~~~l~~   68 (268)
T 3r4c_A           32 SQSSIDALKKVHDSGIKIVIATGRAASDL-HEIDAVPY   68 (268)
T ss_dssp             CHHHHHHHHHHHHTTCEEEEECSSCTTCC-GGGTTSCC
T ss_pred             CHHHHHHHHHHHHCCCEEEEEcCCChHHh-HHHHhcCC
Confidence            34456667777777888888887765544 233 4444

>2x4d_A HLHPP, phospholysine phosphohistidine inorganic pyrophos phosphatase; hydrolase; 1.92A {Homo sapiens}

Probab=97.77  E-value=4.2e-05  Score=61.77  Aligned_cols=22  Identities=9%  Similarity=0.055  Sum_probs=18.2

Q ss_pred             HhhccCCcEEEEECCCcccccc
Q 028799           77 LQLWRTADAVCFDVDSTVCVDE   98 (203)
Q Consensus        77 ~~~~~~~kaVIFD~DGTLiDse   98 (203)
                      .+.+.++++|+|||||||+|++
T Consensus         6 ~~~m~~~k~i~fDlDGTLl~s~   27 (271)
T 2x4d_A            6 GKRLAGVRGVLLDISGVLYDSG   27 (271)
T ss_dssp             HHHTTTCCEEEECCBTTTEECC
T ss_pred             HHHHhcCCEEEEeCCCeEEecC
Confidence            3456678999999999999964

>1vjr_A 4-nitrophenylphosphatase; TM1742, structural genomics, JCSG, protein structure initiative, joint center for structural G hydrolase; 2.40A {Thermotoga maritima} SCOP: c.108.1.14 PDB: 1pw5_A*

Probab=97.72  E-value=4.4e-05  Score=62.58  Aligned_cols=38  Identities=21%  Similarity=0.114  Sum_probs=27.4

Q ss_pred             CCcHHHHHHHHHHCCCeEEEEcC---CCHHHHHHHH-HcCCC
Q 028799          157 SPGIDELVKKLKANNKNVYLISG---GFRHMINILN-ILKWD  194 (203)
Q Consensus       157 ~PG~~elL~~Lk~~G~~vaIVTn---~~~~~i~~ll-~lGL~  194 (203)
                      .|++.+.++.|+++|++++++||   .+...+...+ .+|++
T Consensus        35 ~~~~~~~l~~l~~~G~~~~~aTn~~gr~~~~~~~~~~~lg~~   76 (271)
T 1vjr_A           35 LPGSLEFLETLKEKNKRFVFFTNNSSLGAQDYVRKLRNMGVD   76 (271)
T ss_dssp             CTTHHHHHHHHHHTTCEEEEEESCTTSCHHHHHHHHHHTTCC
T ss_pred             CcCHHHHHHHHHHcCCeEEEEECCCCCCHHHHHHHHHHcCCC
Confidence            46667778888888899999994   4455555666 77764

>1nf2_A Phosphatase; structural proteomics, HAD NEW fold, structural genomics, BSGC structure funded by NIH structure initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.108.1.10

Probab=97.72  E-value=7.4e-05  Score=61.90  Aligned_cols=35  Identities=11%  Similarity=-0.082  Sum_probs=28.5

Q ss_pred             HHHHHHHHHHCCCeEEEEcCCCHHHHHHHH-HcCCCc
Q 028799          160 IDELVKKLKANNKNVYLISGGFRHMINILN-ILKWDV  195 (203)
Q Consensus       160 ~~elL~~Lk~~G~~vaIVTn~~~~~i~~ll-~lGL~~  195 (203)
                      ..+.|+. +++|++++++|+.+...+..++ .+|++.
T Consensus        24 ~~~al~~-~~~Gi~v~iaTGR~~~~~~~~~~~l~~~~   59 (268)
T 1nf2_A           24 DRRNIEK-LSRKCYVVFASGRMLVSTLNVEKKYFKRT   59 (268)
T ss_dssp             HHHHHHH-HTTTSEEEEECSSCHHHHHHHHHHHSSSC
T ss_pred             HHHHHHH-HhCCCEEEEECCCChHHHHHHHHHhCCCC
Confidence            3566677 7789999999999988888888 888764

>1yv9_A Hydrolase, haloacid dehalogenase family; hypothetical protein, struc genomics, PSI, protein structure initiative; 2.80A {Enterococcus faecalis} SCOP: c.108.1.14

Probab=97.71  E-value=1.8e-05  Score=64.83  Aligned_cols=18  Identities=17%  Similarity=0.283  Sum_probs=15.7

Q ss_pred             cCCcEEEEECCCcccccc
Q 028799           81 RTADAVCFDVDSTVCVDE   98 (203)
Q Consensus        81 ~~~kaVIFD~DGTLiDse   98 (203)
                      .++++|+||+||||+|++
T Consensus         3 ~~~k~v~fDlDGTL~~~~   20 (264)
T 1yv9_A            3 LDYQGYLIDLDGTIYLGK   20 (264)
T ss_dssp             CSCCEEEECCBTTTEETT
T ss_pred             ccCCEEEEeCCCeEEeCC
Confidence            468999999999999964

>1l6r_A Hypothetical protein TA0175; structural genomics, putative hydrolas midwest center for structural genomics, MCSG, PSI; 1.40A {Thermoplasma acidophilum} SCOP: c.108.1.10 PDB: 1kyt_A

Probab=97.64  E-value=6.5e-05  Score=61.24  Aligned_cols=38  Identities=18%  Similarity=0.207  Sum_probs=33.0

Q ss_pred             CcHHHHHHHHHHCCCeEEEEcCCCHHHHHHHH-HcCCCc
Q 028799          158 PGIDELVKKLKANNKNVYLISGGFRHMINILN-ILKWDV  195 (203)
Q Consensus       158 PG~~elL~~Lk~~G~~vaIVTn~~~~~i~~ll-~lGL~~  195 (203)
                      |.+.+.|+.|+++|++++++|+.+...+..++ .+|++.
T Consensus        25 ~~~~~~l~~l~~~g~~~~i~TGr~~~~~~~~~~~l~~~~   63 (227)
T 1l6r_A           25 TKAIESIRSAEKKGLTVSLLSGNVIPVVYALKIFLGING   63 (227)
T ss_dssp             HHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCCS
T ss_pred             HHHHHHHHHHHHCCCEEEEECCCCcHHHHHHHHHhCCCC
Confidence            34677788999999999999999999999988 888875

>1qyi_A ZR25, hypothetical protein; structural genomics, PSI, protein structure initiative, NORT structural genomics consortium, NESG; 2.50A {Staphylococcus aureus subsp} SCOP: c.108.1.13

Probab=97.60  E-value=3.4e-05  Score=68.63  Aligned_cols=49  Identities=14%  Similarity=-0.032  Sum_probs=44.4

Q ss_pred             CCCCCcHHHHHHHHHHCCCeEEEEcCCCHHHHHHHH-HcCCCccce--EEec
Q 028799          154 PRLSPGIDELVKKLKANNKNVYLISGGFRHMINILN-ILKWDVLKV--IQIT  202 (203)
Q Consensus       154 ~~l~PG~~elL~~Lk~~G~~vaIVTn~~~~~i~~ll-~lGL~~~~~--i~it  202 (203)
                      .+++||+.++|+.|+++|++++|+||+++..++.++ .+|+..++.  .+++
T Consensus       214 ~~l~pGv~elL~~Lk~~Gi~laIvTn~~~~~~~~~L~~lgL~~~Fd~~~Ivs  265 (384)
T 1qyi_A          214 LRPVDEVKVLLNDLKGAGFELGIATGRPYTETVVPFENLGLLPYFEADFIAT  265 (384)
T ss_dssp             SSCHHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCGGGSCGGGEEC
T ss_pred             CCcCcCHHHHHHHHHhCCCEEEEEeCCcHHHHHHHHHHcCChHhcCCCEEEe
Confidence            578999999999999999999999999999999999 999988876  5554

>1zjj_A Hypothetical protein PH1952; alpha/beta hydrolase fold, HAD superfamily, structural genom riken structural genomics/proteomics initiative; 1.85A {Pyrococcus horikoshii}

Probab=97.60  E-value=5.2e-05  Score=62.48  Aligned_cols=25  Identities=24%  Similarity=0.434  Sum_probs=17.8

Q ss_pred             CcHHHHHHHHHHCCCeEEEEcCCCH
Q 028799          158 PGIDELVKKLKANNKNVYLISGGFR  182 (203)
Q Consensus       158 PG~~elL~~Lk~~G~~vaIVTn~~~  182 (203)
                      |++.+.|+.|+++|++++++||...
T Consensus        20 ~~~~~~l~~l~~~g~~~~~~T~r~~   44 (263)
T 1zjj_A           20 PGVRELIEFLKERGIPFAFLTNNST   44 (263)
T ss_dssp             TTHHHHHHHHHHHTCCEEEEESCCS
T ss_pred             ccHHHHHHHHHHCCCeEEEEeCCCC
Confidence            5666777777777777777777654

>2fpr_A Histidine biosynthesis bifunctional protein HISB; histidinola phosphate phosphatase, bifunctional enzyme structural genomics; 1.70A {Escherichia coli} SCOP: c.108.1.19 PDB: 2fps_A 2fpu_A* 2fpx_A 2fpw_A*

Probab=97.58  E-value=8.9e-05  Score=58.00  Aligned_cols=45  Identities=11%  Similarity=0.167  Sum_probs=39.4

Q ss_pred             CCCCCcHHHHHHHHHHCCCeEEEEcCC---------------CHHHHHHHH-HcCCCccceE
Q 028799          154 PRLSPGIDELVKKLKANNKNVYLISGG---------------FRHMINILN-ILKWDVLKVI  199 (203)
Q Consensus       154 ~~l~PG~~elL~~Lk~~G~~vaIVTn~---------------~~~~i~~ll-~lGL~~~~~i  199 (203)
                      .+++||+.++|+.|+++|++++|+||+               +...++.++ .+|+. +..+
T Consensus        41 ~~~~pg~~e~L~~L~~~G~~l~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~-fd~v  101 (176)
T 2fpr_A           41 LAFEPGVIPQLLKLQKAGYKLVMITNQDGLGTQSFPQADFDGPHNLMMQIFTSQGVQ-FDEV  101 (176)
T ss_dssp             CCBCTTHHHHHHHHHHTTEEEEEEEECTTTTBTTBCHHHHHHHHHHHHHHHHHTTCC-EEEE
T ss_pred             CcCCccHHHHHHHHHHCCCEEEEEECCccccccccchHhhhhhHHHHHHHHHHcCCC-eeEE
Confidence            578999999999999999999999999               677888888 99998 4443

>2b30_A Pvivax hypothetical protein; SGPP, structural genomics, PSI, protein structure initiative; 2.70A {Plasmodium vivax} SCOP: c.108.1.10

Probab=97.50  E-value=0.00017  Score=61.16  Aligned_cols=32  Identities=13%  Similarity=-0.011  Sum_probs=23.9

Q ss_pred             CCcHHHHHHHHHHCCCeEEEEcCCCHHHHHHH
Q 028799          157 SPGIDELVKKLKANNKNVYLISGGFRHMINIL  188 (203)
Q Consensus       157 ~PG~~elL~~Lk~~G~~vaIVTn~~~~~i~~l  188 (203)
                      .|...+.|+.|+++|++++++|+.+...+..+
T Consensus        47 s~~~~~al~~l~~~Gi~v~iaTGR~~~~~~~~   78 (301)
T 2b30_A           47 PSENIDAIKEAIEKGYMVSICTGRSKVGILSA   78 (301)
T ss_dssp             CHHHHHHHHHHHHHTCEEEEECSSCHHHHHHH
T ss_pred             CHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHH
Confidence            34456777778888899999998887766554

>1rlm_A Phosphatase; HAD family, rossman fold, hydrolase; 1.90A {Escherichia coli} SCOP: c.108.1.10 PDB: 1rlt_A 1rlo_A* 2hf2_A

Probab=97.44  E-value=0.00011  Score=60.86  Aligned_cols=33  Identities=18%  Similarity=0.015  Sum_probs=20.7

Q ss_pred             HHHHHHHHHCCCeEEEEcCCCHHHHHHHH-HcCC
Q 028799          161 DELVKKLKANNKNVYLISGGFRHMINILN-ILKW  193 (203)
Q Consensus       161 ~elL~~Lk~~G~~vaIVTn~~~~~i~~ll-~lGL  193 (203)
                      .+.|+.|+++|++++|+|+.+...+..++ .+++
T Consensus        27 ~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~   60 (271)
T 1rlm_A           27 MAQYQELKKRGIKFVVASGNQYYQLISFFPELKD   60 (271)
T ss_dssp             HHHHHHHHHHTCEEEEECSSCHHHHGGGCTTTTT
T ss_pred             HHHHHHHHHCCCEEEEEeCCcHHHHHHHHHhcCC
Confidence            44555566667777777777766665555 5544

>2rbk_A Putative uncharacterized protein; HAD-like phosphatase, unknown function; 1.00A {Bacteroides thetaiotaomicron} SCOP: c.108.1.10 PDB: 1ymq_A 2rb5_A 2rav_A 2rar_A

Probab=97.44  E-value=3.5e-05  Score=63.40  Aligned_cols=33  Identities=15%  Similarity=0.116  Sum_probs=22.1

Q ss_pred             cHHHHHHHHHHCCCeEEEEcCCCHHHHHHHH-HcC
Q 028799          159 GIDELVKKLKANNKNVYLISGGFRHMINILN-ILK  192 (203)
Q Consensus       159 G~~elL~~Lk~~G~~vaIVTn~~~~~i~~ll-~lG  192 (203)
                      ...+.|+.|+++|++++++|+.+ ..+..++ .+|
T Consensus        24 ~~~~al~~l~~~G~~~~iaTGR~-~~~~~~~~~l~   57 (261)
T 2rbk_A           24 STIEALEAAHAKGLKIFIATGRP-KAIINNLSELQ   57 (261)
T ss_dssp             HHHHHHHHHHHTTCEEEEECSSC-GGGCCSCHHHH
T ss_pred             HHHHHHHHHHHCCCEEEEECCCh-HHHHHHHHHhC
Confidence            34556666777888888888877 6555554 555

>3zx4_A MPGP, mannosyl-3-phosphoglycerate phosphatase; hydrolase, haloalkanoid acid dehalogenase-like phosphatase, crystallographic snapshot; HET: 2M8; 1.74A {Thermus thermophilus} PDB: 3zty_A 3zu6_A* 3ztw_A* 3zw7_A* 3zwd_A* 3zwk_A 3zup_A* 3zx5_A*

Probab=97.37  E-value=0.00035  Score=57.32  Aligned_cols=35  Identities=17%  Similarity=0.181  Sum_probs=26.0

Q ss_pred             CCcHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHcCCC
Q 028799          157 SPGIDELVKKLKANNKNVYLISGGFRHMINILNILKWD  194 (203)
Q Consensus       157 ~PG~~elL~~Lk~~G~~vaIVTn~~~~~i~~ll~lGL~  194 (203)
                      .+.+.+.|+.|+++|++++++|+.+...+.   .+|+.
T Consensus        18 ~~~~~~al~~l~~~Gi~v~iaTGR~~~~~~---~l~~~   52 (259)
T 3zx4_A           18 LGPAREALERLRALGVPVVPVTAKTRKEVE---ALGLE   52 (259)
T ss_dssp             CSTTHHHHHHHHHTTCCEEEBCSSCHHHHH---HTTCC
T ss_pred             CHHHHHHHHHHHHCCCeEEEEeCCCHHHHH---HcCCC
Confidence            345566777888899999999998887766   45543

>2zos_A MPGP, mannosyl-3-phosphoglycerate phosphatase; haloacid dehalogenase like hydrolase, mannosylglycerate, cytoplasm, hydrolase, magnesium; 1.70A {Pyrococcus horikoshii} PDB: 1wzc_A

Probab=97.35  E-value=0.00028  Score=57.88  Aligned_cols=34  Identities=15%  Similarity=0.144  Sum_probs=28.7

Q ss_pred             HHHHHHHHCCCeEEEEcCCCHHHHHHHH-HcCCCc
Q 028799          162 ELVKKLKANNKNVYLISGGFRHMINILN-ILKWDV  195 (203)
Q Consensus       162 elL~~Lk~~G~~vaIVTn~~~~~i~~ll-~lGL~~  195 (203)
                      +.|+.|+++|++++|+||.+...+..++ .+|++.
T Consensus        24 ~~l~~l~~~g~~~~i~Tgr~~~~~~~~~~~~~~~~   58 (249)
T 2zos_A           24 PIIEELKDMGFEIIFNSSKTRAEQEYYRKELEVET   58 (249)
T ss_dssp             HHHHHHHHTTEEEEEBCSSCHHHHHHHHHHHTCCS
T ss_pred             HHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCCc
Confidence            4666788899999999999998888888 888764

>2hhl_A CTD small phosphatase-like protein; CTD phosphatase, keggins anion, structural genomics, PSI, protein structure initiative; HET: KEG; 2.10A {Homo sapiens}

Probab=97.13  E-value=0.0004  Score=55.92  Aligned_cols=48  Identities=10%  Similarity=0.133  Sum_probs=43.6

Q ss_pred             CCCCCcHHHHHHHHHHCCCeEEEEcCCCHHHHHHHH-HcCCCccceEEec
Q 028799          154 PRLSPGIDELVKKLKANNKNVYLISGGFRHMINILN-ILKWDVLKVIQIT  202 (203)
Q Consensus       154 ~~l~PG~~elL~~Lk~~G~~vaIVTn~~~~~i~~ll-~lGL~~~~~i~it  202 (203)
                      +.++||+.++|++|++. ++++|+|++.+..++.++ .+|+..++...++
T Consensus        67 v~~RPgv~efL~~l~~~-~~i~I~Tss~~~~a~~vl~~ld~~~~f~~~l~  115 (195)
T 2hhl_A           67 VLKRPHVDEFLQRMGQL-FECVLFTASLAKYADPVADLLDRWGVFRARLF  115 (195)
T ss_dssp             EEECTTHHHHHHHHHHH-SEEEEECSSCHHHHHHHHHHHCCSSCEEEEEC
T ss_pred             EEeCcCHHHHHHHHHcC-CeEEEEcCCCHHHHHHHHHHhCCcccEEEEEE
Confidence            56899999999999998 999999999999999999 9999887776654

>1u02_A Trehalose-6-phosphate phosphatase related protein; structural genomics, PSI; 1.92A {Thermoplasma acidophilum} SCOP: c.108.1.15

Probab=97.11  E-value=0.00042  Score=56.64  Aligned_cols=36  Identities=19%  Similarity=0.312  Sum_probs=29.7

Q ss_pred             CCCCcHHHHHHHHHHCCCeEEEEcCCCHHHHHHHH-Hc
Q 028799          155 RLSPGIDELVKKLKANNKNVYLISGGFRHMINILN-IL  191 (203)
Q Consensus       155 ~l~PG~~elL~~Lk~~G~~vaIVTn~~~~~i~~ll-~l  191 (203)
                      .+.|...+.|+.|+++| +++|+|+.+...+..++ .+
T Consensus        23 ~i~~~~~~al~~l~~~g-~v~iaTGR~~~~~~~~~~~l   59 (239)
T 1u02_A           23 YADAGLLSLISDLKERF-DTYIVTGRSPEEISRFLPLD   59 (239)
T ss_dssp             CCCHHHHHHHHHHHHHS-EEEEECSSCHHHHHHHSCSS
T ss_pred             CCCHHHHHHHHHHhcCC-CEEEEeCCCHHHHHHHhccc
Confidence            35667788899999999 99999999988887776 54

>2ght_A Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1; protein-peptide complex, HAD superfamily, hydrolase; HET: SEP; 1.80A {Homo sapiens} PDB: 2ghq_A* 3pgl_A* 1t9z_A* 1ta0_A* 3l0c_A 3l0y_A 3l0b_A* 2q5e_A

Probab=97.03  E-value=0.00057  Score=54.17  Aligned_cols=48  Identities=10%  Similarity=0.100  Sum_probs=43.2

Q ss_pred             CCCCCcHHHHHHHHHHCCCeEEEEcCCCHHHHHHHH-HcCCCccceEEec
Q 028799          154 PRLSPGIDELVKKLKANNKNVYLISGGFRHMINILN-ILKWDVLKVIQIT  202 (203)
Q Consensus       154 ~~l~PG~~elL~~Lk~~G~~vaIVTn~~~~~i~~ll-~lGL~~~~~i~it  202 (203)
                      +.++||+.++|+++++. ++++|+||+.+.+++.++ .++...++...++
T Consensus        54 v~~rPg~~efL~~l~~~-~~i~I~T~~~~~~a~~vl~~ld~~~~f~~~~~  102 (181)
T 2ght_A           54 VLKRPHVDEFLQRMGEL-FECVLFTASLAKYADPVADLLDKWGAFRARLF  102 (181)
T ss_dssp             EEECTTHHHHHHHHHHH-SEEEEECSSCHHHHHHHHHHHCTTCCEEEEEC
T ss_pred             EEeCCCHHHHHHHHHhC-CCEEEEcCCCHHHHHHHHHHHCCCCcEEEEEe
Confidence            57899999999999997 999999999999999999 9999887766554

>1ltq_A Polynucleotide kinase; phosphatase, alpha/beta, P-loop, transferase; HET: ADP; 2.33A {Enterobacteria phage T4} SCOP: c.108.1.9 c.37.1.1 PDB: 1rc8_A* 1rpz_A* 1rrc_A* 2ia5_A

Probab=96.43  E-value=0.0015  Score=54.67  Aligned_cols=40  Identities=15%  Similarity=0.081  Sum_probs=33.7

Q ss_pred             CCCCCcHHHHHHHHHHCCCeEEEEcCCCHHH---HHHHH-H--------cCC
Q 028799          154 PRLSPGIDELVKKLKANNKNVYLISGGFRHM---INILN-I--------LKW  193 (203)
Q Consensus       154 ~~l~PG~~elL~~Lk~~G~~vaIVTn~~~~~---i~~ll-~--------lGL  193 (203)
                      ..++||+.++|+.|+++|++++|+||++...   +..++ +        +|+
T Consensus       187 ~~~~~g~~e~L~~L~~~g~~~~v~T~k~~~~~~~~~~~l~~~~~~~~~~~~~  238 (301)
T 1ltq_A          187 DVINPMVVELSKMYALMGYQIVVVSGRESGTKEDPTKYYRMTRKWVEDIAGV  238 (301)
T ss_dssp             CCBCHHHHHHHHHHHHTTCEEEEEECSCCCCSSSTTHHHHHHHHHHHHTTCC
T ss_pred             cCCChHHHHHHHHHHHCCCeEEEEeCCCcccchhHHHHHHhcccccccccCC
Confidence            4679999999999999999999999998553   34555 6        898

>3ewi_A N-acylneuraminate cytidylyltransferase; beta barrel, HAD-like, rossmannoid fold, nucleotidyltransferase, nucleus; 1.90A {Mus musculus}

Probab=95.41  E-value=0.0068  Score=47.39  Aligned_cols=20  Identities=5%  Similarity=0.149  Sum_probs=16.2

Q ss_pred             hccCCcEEEEECCCcccccc
Q 028799           79 LWRTADAVCFDVDSTVCVDE   98 (203)
Q Consensus        79 ~~~~~kaVIFD~DGTLiDse   98 (203)
                      ..+++++++||+||||+|..
T Consensus         5 ~~~~ikliv~D~DGtL~d~~   24 (168)
T 3ewi_A            5 KLKEIKLLVCNIDGCLTNGH   24 (168)
T ss_dssp             --CCCCEEEEECCCCCSCSC
T ss_pred             hHhcCcEEEEeCccceECCc
Confidence            45789999999999999953

>2amy_A PMM 2, phosphomannomutase 2; HS.459855, HS.313504, BC008310, phosphatase, PFAM PF03332, H superfamily, jaecken disease; 2.09A {Homo sapiens} SCOP: c.108.1.10 PDB: 2q4r_A

Probab=94.96  E-value=0.01  Score=48.13  Aligned_cols=18  Identities=28%  Similarity=0.355  Sum_probs=15.7

Q ss_pred             cCCcEEEEECCCcccccc
Q 028799           81 RTADAVCFDVDSTVCVDE   98 (203)
Q Consensus        81 ~~~kaVIFD~DGTLiDse   98 (203)
                      .++++++|||||||++++
T Consensus         4 ~~~kli~~DlDGTLl~~~   21 (246)
T 2amy_A            4 PGPALCLFDVDGTLTAPR   21 (246)
T ss_dssp             CCSEEEEEESBTTTBCTT
T ss_pred             CCceEEEEECCCCcCCCC
Confidence            467899999999999875

>4g63_A Cytosolic IMP-GMP specific 5'-nucleotidase; structural genomics, PSI-biology, northeast structural genom consortium, NESG; 2.70A {Legionella pneumophila subsp} PDB: 2bde_A

Probab=94.72  E-value=0.029  Score=51.06  Aligned_cols=49  Identities=18%  Similarity=0.223  Sum_probs=43.4

Q ss_pred             CCCCcHHHHHHHHHHCCCeEEEEcCCCHHHHHHHH--Hc--------CCCccceEEecC
Q 028799          155 RLSPGIDELVKKLKANNKNVYLISGGFRHMINILN--IL--------KWDVLKVIQITS  203 (203)
Q Consensus       155 ~l~PG~~elL~~Lk~~G~~vaIVTn~~~~~i~~ll--~l--------GL~~~~~i~it~  203 (203)
                      ...|....+|+.||+.|.++.|+||++..+++.++  .+        +|..+|+++||.
T Consensus       186 ~k~~~l~~~L~~lr~~GKklFLiTNS~~~y~~~~M~y~~~~~~~~g~dWrdlFDvVIv~  244 (470)
T 4g63_A          186 IREKEVVEGLKHFIRYGKKIFILTNSEYSYSKLLLDYALSPFLDKGEHWQGLFEFVITL  244 (470)
T ss_dssp             ECCHHHHHHHHHHHTTTCEEEEECSSCHHHHHHHHHHHTGGGSCTTCCGGGGCSEEEES
T ss_pred             hCCHhHHHHHHHHHHcCCeEEEeeCCCchHHHHHHHhhcccCCCCCCChhhhcCEEEEC
Confidence            45689999999999999999999999999998887  56        578899999984

>2jc9_A Cytosolic purine 5'-nucleotidase; cytosolic 5-prime nucleotidase II, GMP-IMP specific nucleotidase, CN-II, NT5C2, hydrolase, polymorphism; HET: ADN; 1.5A {Homo sapiens} PDB: 2j2c_A* 2xje_A* 2xjf_A* 2jcm_A* 2xcw_A* 2xcv_A* 2xcx_A 2xjb_A* 2xjc_A* 2xjd_A*

Probab=94.50  E-value=0.039  Score=51.15  Aligned_cols=48  Identities=13%  Similarity=0.199  Sum_probs=41.0

Q ss_pred             CCCCCcHHHHHHHHHHCCCeEEEEcCCCHHHHHHHH-Hc-C-------------CCccceEEec
Q 028799          154 PRLSPGIDELVKKLKANNKNVYLISGGFRHMINILN-IL-K-------------WDVLKVIQIT  202 (203)
Q Consensus       154 ~~l~PG~~elL~~Lk~~G~~vaIVTn~~~~~i~~ll-~l-G-------------L~~~~~i~it  202 (203)
                      +..-|.+.++|+.||+.| ++.|+||+....++.++ .+ |             |..+|+++|+
T Consensus       245 v~kdp~l~~~L~~Lr~~G-KlfLiTNS~~~yv~~~m~yllg~~~~~~~~~~~~dWrdlFD~vI~  307 (555)
T 2jc9_A          245 VVKDGKLPLLLSRMKEVG-KVFLATNSDYKYTDKIMTYLFDFPHGPKPGSSHRPWQSYFDLILV  307 (555)
T ss_dssp             BCCCTHHHHHHHHHHHHS-EEEEECSSCHHHHHHHHHHHTCSSSSSSTTSCCCCGGGGCSEEEE
T ss_pred             cCCChHHHHHHHHHHHcC-CEEEEeCCChHHHHHHHHHhcCCCccccccccccchhhhCCEEEE
Confidence            456789999999999999 99999999999999988 44 7             4567787776

>2fue_A PMM 1, PMMH-22, phosphomannomutase 1; enzyme-product complex, protein glycosyl carbohydrate-deficient glycoprotein syndrome; HET: MSE M1P; 1.75A {Homo sapiens} SCOP: c.108.1.10 PDB: 2fuc_A*

Probab=94.33  E-value=0.016  Score=47.60  Aligned_cols=18  Identities=28%  Similarity=0.348  Sum_probs=14.7

Q ss_pred             cCCcEEEEECCCcccccc
Q 028799           81 RTADAVCFDVDSTVCVDE   98 (203)
Q Consensus        81 ~~~kaVIFD~DGTLiDse   98 (203)
                      .++++++|||||||++++
T Consensus        11 ~~~kli~~DlDGTLl~~~   28 (262)
T 2fue_A           11 KERVLCLFDVDGTLTPAR   28 (262)
T ss_dssp             --CEEEEEESBTTTBSTT
T ss_pred             cCeEEEEEeCccCCCCCC
Confidence            357899999999999975

>3qle_A TIM50P; chaperone, mitochondrion, preprotein translocation; HET: 1PE; 1.83A {Saccharomyces cerevisiae EC1118}

Probab=93.87  E-value=0.091  Score=42.54  Aligned_cols=44  Identities=16%  Similarity=0.146  Sum_probs=39.0

Q ss_pred             CCCCCcHHHHHHHHHHCCCeEEEEcCCCHHHHHHHH-HcCCCc-cce
Q 028799          154 PRLSPGIDELVKKLKANNKNVYLISGGFRHMINILN-ILKWDV-LKV  198 (203)
Q Consensus       154 ~~l~PG~~elL~~Lk~~G~~vaIVTn~~~~~i~~ll-~lGL~~-~~~  198 (203)
                      +...||+.++|+.+. +++.++|.|++.+..++.++ .++... ++.
T Consensus        58 v~~RPgl~eFL~~l~-~~yeivI~Tas~~~ya~~vl~~LDp~~~~f~  103 (204)
T 3qle_A           58 TAKRPGADYFLGYLS-QYYEIVLFSSNYMMYSDKIAEKLDPIHAFVS  103 (204)
T ss_dssp             EEECTTHHHHHHHHT-TTEEEEEECSSCHHHHHHHHHHTSTTCSSEE
T ss_pred             EEeCCCHHHHHHHHH-hCCEEEEEcCCcHHHHHHHHHHhCCCCCeEE
Confidence            468999999999998 78999999999999999999 998763 444

>3j08_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus}

Probab=93.10  E-value=0.11  Score=48.65  Aligned_cols=43  Identities=21%  Similarity=0.241  Sum_probs=39.8

Q ss_pred             CCCCcHHHHHHHHHHCCCeEEEEcCCCHHHHHHHH-HcCCCccc
Q 028799          155 RLSPGIDELVKKLKANNKNVYLISGGFRHMINILN-ILKWDVLK  197 (203)
Q Consensus       155 ~l~PG~~elL~~Lk~~G~~vaIVTn~~~~~i~~ll-~lGL~~~~  197 (203)
                      ++.|++.+.++.|+++|++++++||.....++.+. .+|++.++
T Consensus       457 ~l~~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~lgi~~~~  500 (645)
T 3j08_A          457 TLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLDLVI  500 (645)
T ss_dssp             CCTTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCSEEE
T ss_pred             CchhHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCCEEE
Confidence            58999999999999999999999999999999999 99997543

>3ef0_A RNA polymerase II subunit A C-terminal domain phosphatase; CTD, FCPH, BRCT, hydrolase, ALF4, transition state analog, cobalt, magnesium; 2.10A {Schizosaccharomyces pombe}

Probab=92.00  E-value=0.14  Score=45.15  Aligned_cols=43  Identities=14%  Similarity=0.255  Sum_probs=39.1

Q ss_pred             CCCCCcHHHHHHHHHHCCCeEEEEcCCCHHHHHHHH-HcCCCc-cc
Q 028799          154 PRLSPGIDELVKKLKANNKNVYLISGGFRHMINILN-ILKWDV-LK  197 (203)
Q Consensus       154 ~~l~PG~~elL~~Lk~~G~~vaIVTn~~~~~i~~ll-~lGL~~-~~  197 (203)
                      +.+.||+.++|+.+. +++.++|.|++.+.++++++ .++... ++
T Consensus        74 v~~RPg~~eFL~~l~-~~yeivI~Tas~~~yA~~vl~~LDp~~~~f  118 (372)
T 3ef0_A           74 IKFRPGLAQFLQKIS-ELYELHIYTMGTKAYAKEVAKIIDPTGKLF  118 (372)
T ss_dssp             EEECTTHHHHHHHHH-TTEEEEEECSSCHHHHHHHHHHHCTTSCSS
T ss_pred             EEECcCHHHHHHHHh-cCcEEEEEeCCcHHHHHHHHHHhccCCcee
Confidence            678999999999998 78999999999999999999 998876 44

>1s2o_A SPP, sucrose-phosphatase; phosphohydrolase, HAD superfamily, cyanobacteria; 1.40A {Synechocystis SP} SCOP: c.108.1.10 PDB: 1tj3_A 1tj4_A* 1tj5_A* 1u2s_A* 1u2t_A* 2b1q_A* 2b1r_A* 2d2v_A*

Probab=91.94  E-value=0.058  Score=43.76  Aligned_cols=14  Identities=29%  Similarity=0.283  Sum_probs=12.9

Q ss_pred             EEEEECCCcccccc
Q 028799           85 AVCFDVDSTVCVDE   98 (203)
Q Consensus        85 aVIFD~DGTLiDse   98 (203)
                      +++||+||||++++
T Consensus         5 li~~DlDGTLl~~~   18 (244)
T 1s2o_A            5 LLISDLDNTWVGDQ   18 (244)
T ss_dssp             EEEECTBTTTBSCH
T ss_pred             EEEEeCCCCCcCCH
Confidence            89999999999975

>3j09_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus}

Probab=91.34  E-value=0.25  Score=46.91  Aligned_cols=43  Identities=21%  Similarity=0.252  Sum_probs=39.8

Q ss_pred             CCCCCcHHHHHHHHHHCCCeEEEEcCCCHHHHHHHH-HcCCCcc
Q 028799          154 PRLSPGIDELVKKLKANNKNVYLISGGFRHMINILN-ILKWDVL  196 (203)
Q Consensus       154 ~~l~PG~~elL~~Lk~~G~~vaIVTn~~~~~i~~ll-~lGL~~~  196 (203)
                      -++.|++.+.++.|+++|++++++|+.....++.+. .+|++.+
T Consensus       534 D~~~~~~~~~i~~l~~~Gi~v~~~TGd~~~~a~~ia~~lgi~~~  577 (723)
T 3j09_A          534 DTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLDLV  577 (723)
T ss_dssp             CCSCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCSEE
T ss_pred             CCcchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCcEE
Confidence            368999999999999999999999999999999999 9999754

>3rfu_A Copper efflux ATPase; alpha helical, CPC, CXXC, ATP-binding, hydrolase, ION transp magnesium, Cu+, membrane, metal-binding; 3.20A {Legionella pneumophila subsp}

Probab=90.08  E-value=0.31  Score=46.58  Aligned_cols=43  Identities=9%  Similarity=0.221  Sum_probs=39.8

Q ss_pred             CCCCCcHHHHHHHHHHCCCeEEEEcCCCHHHHHHHH-HcCCCcc
Q 028799          154 PRLSPGIDELVKKLKANNKNVYLISGGFRHMINILN-ILKWDVL  196 (203)
Q Consensus       154 ~~l~PG~~elL~~Lk~~G~~vaIVTn~~~~~i~~ll-~lGL~~~  196 (203)
                      -++.|++.+.++.|+++|++++++|+.....++.+. .+|++.+
T Consensus       553 D~i~~~~~~aI~~L~~~Gi~v~mlTGd~~~~a~~ia~~lgi~~v  596 (736)
T 3rfu_A          553 DPIKSSTPETILELQQSGIEIVMLTGDSKRTAEAVAGTLGIKKV  596 (736)
T ss_dssp             CCBCSSHHHHHHHHHHHTCEEEEECSSCHHHHHHHHHHHTCCCE
T ss_pred             ccchhhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCEE
Confidence            368899999999999999999999999999999999 9999764

>3ar4_A Sarcoplasmic/endoplasmic reticulum calcium ATPase; P-type ATPase, hydrolase, calcium transport, calcium binding binding; HET: ATP TG1 PTY; 2.15A {Oryctolagus cuniculus} PDB: 2ear_A* 2eas_A* 2eat_A* 2eau_A* 2dqs_A* 2zbe_A 2zbf_A* 2zbg_A* 3ar2_A* 2zbd_A* 3ar3_A* 3ar5_A* 3ar6_A* 3ar7_A* 3ar8_A* 3ar9_A* 3n5k_A* 1kju_A 1iwo_A 1t5s_A* ...

Probab=89.42  E-value=0.43  Score=46.87  Aligned_cols=42  Identities=7%  Similarity=-0.037  Sum_probs=39.0

Q ss_pred             CCCCCcHHHHHHHHHHCCCeEEEEcCCCHHHHHHHH-HcCCCc
Q 028799          154 PRLSPGIDELVKKLKANNKNVYLISGGFRHMINILN-ILKWDV  195 (203)
Q Consensus       154 ~~l~PG~~elL~~Lk~~G~~vaIVTn~~~~~i~~ll-~lGL~~  195 (203)
                      -++.||+.+.++.|++.|+++.++|+.....+..+. .+|+..
T Consensus       602 D~lr~~~~~~I~~l~~~Gi~v~miTGD~~~ta~~ia~~lgi~~  644 (995)
T 3ar4_A          602 DPPRKEVMGSIQLCRDAGIRVIMITGDNKGTAIAICRRIGIFG  644 (995)
T ss_dssp             CCBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHTSSC
T ss_pred             CCCchhHHHHHHHHHHcCCEEEEECCCCHHHHHHHHHHcCcCC
Confidence            368999999999999999999999999999999999 999954

>1qyi_A ZR25, hypothetical protein; structural genomics, PSI, protein structure initiative, NORT structural genomics consortium, NESG; 2.50A {Staphylococcus aureus subsp} SCOP: c.108.1.13

Probab=89.27  E-value=0.19  Score=44.36  Aligned_cols=18  Identities=28%  Similarity=0.427  Sum_probs=15.8

Q ss_pred             CcEEEEECCCcccccchH
Q 028799           83 ADAVCFDVDSTVCVDEGI  100 (203)
Q Consensus        83 ~kaVIFD~DGTLiDse~~  100 (203)
                      +|.|+||+||++++-+.+
T Consensus         1 ~~~~~fdvdgv~~~~~~~   18 (384)
T 1qyi_A            1 MKKILFDVDGVFLSEERC   18 (384)
T ss_dssp             CCEEEECSBTTTBCSHHH
T ss_pred             CceEEEecCceeechhhh
Confidence            578999999999998764

>2fpr_A Histidine biosynthesis bifunctional protein HISB; histidinola phosphate phosphatase, bifunctional enzyme structural genomics; 1.70A {Escherichia coli} SCOP: c.108.1.19 PDB: 2fps_A 2fpu_A* 2fpx_A 2fpw_A*

Probab=88.25  E-value=0.18  Score=38.71  Aligned_cols=16  Identities=19%  Similarity=0.300  Sum_probs=14.4

Q ss_pred             CCcEEEEECCCccccc
Q 028799           82 TADAVCFDVDSTVCVD   97 (203)
Q Consensus        82 ~~kaVIFD~DGTLiDs   97 (203)
                      .+++++||+||||+++
T Consensus        13 ~~k~~~~D~Dgtl~~~   28 (176)
T 2fpr_A           13 SQKYLFIDRDGTLISE   28 (176)
T ss_dssp             CCEEEEECSBTTTBCC
T ss_pred             cCcEEEEeCCCCeEcC
Confidence            5789999999999886

>2zxe_A Na, K-ATPase alpha subunit; membrane protein, ION pump, ATPase, K+ binding, haloacid dehydrogenease superfamily, phosphate analogue; HET: CLR NAG NDG; 2.40A {Squalus acanthias} PDB: 3a3y_A* 3b8e_A* 3kdp_A* 3n2f_A* 3n23_A* 1mo7_A 1mo8_A* 1q3i_A

Probab=86.90  E-value=0.76  Score=45.38  Aligned_cols=40  Identities=10%  Similarity=0.112  Sum_probs=37.8

Q ss_pred             CCCCcHHHHHHHHHHCCCeEEEEcCCCHHHHHHHH-HcCCC
Q 028799          155 RLSPGIDELVKKLKANNKNVYLISGGFRHMINILN-ILKWD  194 (203)
Q Consensus       155 ~l~PG~~elL~~Lk~~G~~vaIVTn~~~~~i~~ll-~lGL~  194 (203)
                      ++.|++.+.++.|++.|+++.++|+-....+..+. .+|+.
T Consensus       599 plr~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lgi~  639 (1028)
T 2zxe_A          599 PPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKGVGII  639 (1028)
T ss_dssp             CBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTSS
T ss_pred             CCChhHHHHHHHHHHcCCEEEEECCCCHHHHHHHHHHcCCC
Confidence            57899999999999999999999999999999999 99986

>3ef0_A RNA polymerase II subunit A C-terminal domain phosphatase; CTD, FCPH, BRCT, hydrolase, ALF4, transition state analog, cobalt, magnesium; 2.10A {Schizosaccharomyces pombe}

Probab=84.32  E-value=0.27  Score=43.29  Aligned_cols=19  Identities=16%  Similarity=0.153  Sum_probs=16.1

Q ss_pred             ccCCcEEEEECCCcccccc
Q 028799           80 WRTADAVCFDVDSTVCVDE   98 (203)
Q Consensus        80 ~~~~kaVIFD~DGTLiDse   98 (203)
                      ..+.+.++||+||||+++.
T Consensus        15 ~~~k~~LVlDLD~TLvhS~   33 (372)
T 3ef0_A           15 QEKRLSLIVDLDQTIIHAT   33 (372)
T ss_dssp             HHTCEEEEECCBTTTEEEE
T ss_pred             hCCCCEEEEcCCCCccccc
Confidence            4556789999999999984

>3ixz_A Potassium-transporting ATPase alpha; ION pump, H+, K+-ATPase, P-type ATPase, membrane protein, hydrolase, aluminium fluoride, ATP-binding; 6.50A {Sus scrofa} PDB: 2yn9_A 2xzb_A 1iwc_A 1iwf_A

Probab=83.70  E-value=1.1  Score=44.11  Aligned_cols=41  Identities=10%  Similarity=0.097  Sum_probs=38.2

Q ss_pred             CCCCCcHHHHHHHHHHCCCeEEEEcCCCHHHHHHHH-HcCCC
Q 028799          154 PRLSPGIDELVKKLKANNKNVYLISGGFRHMINILN-ILKWD  194 (203)
Q Consensus       154 ~~l~PG~~elL~~Lk~~G~~vaIVTn~~~~~i~~ll-~lGL~  194 (203)
                      -++.|++.+.++.|+++|+++.++|+-....+..+. .+|+.
T Consensus       603 Dp~r~~~~~aI~~l~~aGI~vvmiTGd~~~tA~~ia~~lgi~  644 (1034)
T 3ixz_A          603 DPPRATVPDAVLKCRTAGIRVIMVTGDHPITAKAIAASVGII  644 (1034)
T ss_pred             CCCchhHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCCC
Confidence            368999999999999999999999999999999999 99984

>1mhs_A Proton pump, plasma membrane ATPase; ION transport, membrane protein, P-type ATPase, active transport, cryo-electron microscopy; 8.00A {Neurospora crassa} SCOP: i.18.1.1

Probab=82.40  E-value=1  Score=44.05  Aligned_cols=40  Identities=10%  Similarity=0.012  Sum_probs=38.1

Q ss_pred             CCCCcHHHHHHHHHHCCCeEEEEcCCCHHHHHHHH-HcCCC
Q 028799          155 RLSPGIDELVKKLKANNKNVYLISGGFRHMINILN-ILKWD  194 (203)
Q Consensus       155 ~l~PG~~elL~~Lk~~G~~vaIVTn~~~~~i~~ll-~lGL~  194 (203)
                      ++.|++.+.++.|++.|+++.++|+-....+..+. .+|+.
T Consensus       535 p~R~ea~~aI~~l~~aGI~v~MiTGD~~~TA~aIA~~lGI~  575 (920)
T 1mhs_A          535 PPRHDTYKTVCEAKTLGLSIKMLTGDAVGIARETSRQLGLG  575 (920)
T ss_dssp             CCCHHHHHHHHHHHHHTCEEEEEESSCHHHHHHHHHHHTSS
T ss_pred             cccccHHHHHHHHhhcCceEEEEcCCCHHHHHHHHHHcCCC
Confidence            58899999999999999999999999999999999 99995

>3ef1_A RNA polymerase II subunit A C-terminal domain phosphatase; CTD, FCPH, BRCT, hydrolase, BEF3, acylphosphate analog, cobalt, magnesium; HET: BFD; 2.15A {Schizosaccharomyces pombe}

Probab=81.47  E-value=1.2  Score=40.23  Aligned_cols=41  Identities=12%  Similarity=0.262  Sum_probs=37.4

Q ss_pred             CCCCCcHHHHHHHHHHCCCeEEEEcCCCHHHHHHHH-HcCCCc
Q 028799          154 PRLSPGIDELVKKLKANNKNVYLISGGFRHMINILN-ILKWDV  195 (203)
Q Consensus       154 ~~l~PG~~elL~~Lk~~G~~vaIVTn~~~~~i~~ll-~lGL~~  195 (203)
                      +.+.||+.++|+++. +++.++|.|++.+..+.+++ .++-..
T Consensus        82 V~~RPgl~eFL~~ls-~~yEivIfTas~~~YA~~Vl~~LDp~~  123 (442)
T 3ef1_A           82 IKFRPGLAQFLQKIS-ELYELHIYTMGTKAYAKEVAKIIDPTG  123 (442)
T ss_dssp             EEECTTHHHHHHHHT-TTEEEEEECSSCHHHHHHHHHHHCTTS
T ss_pred             EEeCCCHHHHHHHHh-CCcEEEEEcCCCHHHHHHHHHHhccCC
Confidence            678999999999998 67999999999999999999 888765

>3b8c_A ATPase 2, plasma membrane-type; P-type ATPase, proton pump, ATP-binding, hydrogen ION transport, hydrolase, ION transport; HET: ACP; 3.60A {Arabidopsis thaliana}

Probab=81.27  E-value=0.99  Score=43.98  Aligned_cols=40  Identities=15%  Similarity=0.050  Sum_probs=37.6

Q ss_pred             CCCCcHHHHHHHHHHCCCeEEEEcCCCHHHHHHHH-HcCCC
Q 028799          155 RLSPGIDELVKKLKANNKNVYLISGGFRHMINILN-ILKWD  194 (203)
Q Consensus       155 ~l~PG~~elL~~Lk~~G~~vaIVTn~~~~~i~~ll-~lGL~  194 (203)
                      ++.|++.+.++.|++.|+++.++|+-....+..+. .+|+.
T Consensus       488 p~R~~a~~aI~~l~~aGI~v~MiTGD~~~tA~~iA~~lGi~  528 (885)
T 3b8c_A          488 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMG  528 (885)
T ss_dssp             CCCHHHHHHHHHHHHTTCCCEEEESSCHHHHTHHHHTTTCT
T ss_pred             ccchhHHHHHHHHHHcCCcEEEEcCCChHHHHHHHHHhCCc
Confidence            57899999999999999999999999999999999 99984

>2hhl_A CTD small phosphatase-like protein; CTD phosphatase, keggins anion, structural genomics, PSI, protein structure initiative; HET: KEG; 2.10A {Homo sapiens}

Probab=80.43  E-value=0.56  Score=37.21  Aligned_cols=18  Identities=22%  Similarity=0.307  Sum_probs=15.6

Q ss_pred             cCCcEEEEECCCcccccc
Q 028799           81 RTADAVCFDVDSTVCVDE   98 (203)
Q Consensus        81 ~~~kaVIFD~DGTLiDse   98 (203)
                      .+.+.+++|+||||+++.
T Consensus        26 ~~k~~LVLDLD~TLvhs~   43 (195)
T 2hhl_A           26 YGKKCVVIDLDETLVHSS   43 (195)
T ss_dssp             TTCCEEEECCBTTTEEEE
T ss_pred             CCCeEEEEccccceEccc
Confidence            456799999999999975

>3shq_A UBLCP1; phosphatase, hydrolase; 1.96A {Drosophila melanogaster}

Probab=80.22  E-value=1.5  Score=37.72  Aligned_cols=40  Identities=13%  Similarity=0.120  Sum_probs=35.6

Q ss_pred             CCCCcHHHHHHHHHHCCCeEEEEcCCCHHHHHHHH-HcCCCc
Q 028799          155 RLSPGIDELVKKLKANNKNVYLISGGFRHMINILN-ILKWDV  195 (203)
Q Consensus       155 ~l~PG~~elL~~Lk~~G~~vaIVTn~~~~~i~~ll-~lGL~~  195 (203)
                      ...||+.++|+++. +.+.++|-|++...++++++ .++...
T Consensus       164 ~~RP~l~eFL~~l~-~~yeivIfTas~~~ya~~vld~Ld~~~  204 (320)
T 3shq_A          164 LMRPYLHEFLTSAY-EDYDIVIWSATSMRWIEEKMRLLGVAS  204 (320)
T ss_dssp             HBCTTHHHHHHHHH-HHEEEEEECSSCHHHHHHHHHHTTCTT
T ss_pred             EeCCCHHHHHHHHH-hCCEEEEEcCCcHHHHHHHHHHhCCCC
Confidence            36899999999998 56999999999999999999 887643

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	203
d1nnla_	217	c.108.1.4 (A:) Phosphoserine phosphatase {Human (H	1e-28
d2feaa1	226	c.108.1.20 (A:2-227) 2-hydroxy-3-keto-5-methylthio	3e-12
d1j97a_	210	c.108.1.4 (A:) Phosphoserine phosphatase {Archaeon	4e-10
d1rkua_	206	c.108.1.11 (A:) Homoserine kinase ThrH {Pseudomona	5e-10
d2bdua1	291	c.108.1.21 (A:7-297) Cytosolic 5'-nucleotidase III	3e-06

>d1nnla_ c.108.1.4 (A:) Phosphoserine phosphatase {Human (Homo sapiens) [TaxId: 9606]} Length = 217

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Phosphoserine phosphatase
domain: Phosphoserine phosphatase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  104 bits (260), Expect = 1e-28
 Identities = 66/126 (52%), Positives = 89/126 (70%), Gaps = 1/126 (0%)

Query: 75  EVLQLWRTADAVCFDVDSTVCVDEGIDELAEFCGAGKAVAEWTARAMGGSVPFEEALAAR 134
           E+ +L+ +ADAVCFDVDSTV  +EGIDELA+ CG   AV+E T RAMGG+VPF+ AL  R
Sbjct: 2   ELRKLFYSADAVCFDVDSTVIREEGIDELAKICGVEDAVSEMTRRAMGGAVPFKAALTER 61

Query: 135 LSLFKPSLSQVQDFLEKRPPRLSPGIDELVKKLKANNKNVYLISGGFRHMI-NILNILKW 193
           L+L +PS  QVQ  + ++PP L+PGI ELV +L+  N  V+LISGGFR ++ ++ + L  
Sbjct: 62  LALIQPSREQVQRLIAEQPPHLTPGIRELVSRLQERNVQVFLISGGFRSIVEHVASKLNI 121

Query: 194 DVLKVI 199
               V 
Sbjct: 122 PATNVF 127

>d2feaa1 c.108.1.20 (A:2-227) 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX {Bacillus subtilis [TaxId: 1423]} Length = 226

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: MtnX-like
domain: 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX
species: Bacillus subtilis [TaxId: 1423]

 Score = 61.1 bits (147), Expect = 3e-12
 Identities = 17/103 (16%), Positives = 36/103 (34%), Gaps = 1/103 (0%)

Query: 86  VCFDVDSTVCVDEGIDELAEFCGAGKAVAEWTARAMGGSVPFEEALAARLSLFKPSLSQV 145
           +  D D T+ +++ I  + +               +  ++  +E +     L   SL + 
Sbjct: 7   IICDFDGTITMNDNIINIMKTFA-PPEWMALKDGVLSKTLSIKEGVGRMFGLLPSSLKEE 65

Query: 146 QDFLEKRPPRLSPGIDELVKKLKANNKNVYLISGGFRHMINIL 188
                    ++  G  E V  +  +    Y+ISGG    +  L
Sbjct: 66  ITSFVLEDAKIREGFREFVAFINEHEIPFYVISGGMDFFVYPL 108

>d1j97a_ c.108.1.4 (A:) Phosphoserine phosphatase {Archaeon Methanococcus jannaschii [TaxId: 2190]} Length = 210

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Phosphoserine phosphatase
domain: Phosphoserine phosphatase
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

 Score = 55.2 bits (131), Expect = 4e-10
 Identities = 36/102 (35%), Positives = 55/102 (53%), Gaps = 1/102 (0%)

Query: 85  AVCFDVDSTVCVDEGIDELAEFCGAGKAVAEWTARAMGGSVPFEEALAARLSLFKPSLSQ 144
            + FD DST+  +E IDE+A   G  + V + T  AM G + FE++L  R+SL K    +
Sbjct: 6   LILFDFDSTLVNNETIDEIAREAGVEEEVKKITKEAMEGKLNFEQSLRKRVSLLKDLPIE 65

Query: 145 VQDFLEKRPPRLSPGIDELVKKLKANNKNVYLISGGFRHMIN 186
             +   KR    + G +E +K+LK     V ++SGGF   +N
Sbjct: 66  KVEKAIKRITP-TEGAEETIKELKNRGYVVAVVSGGFDIAVN 106

>d1rkua_ c.108.1.11 (A:) Homoserine kinase ThrH {Pseudomonas aeruginosa [TaxId: 287]} Length = 206

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Homoserine kinase ThrH
domain: Homoserine kinase ThrH
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 54.9 bits (131), Expect = 5e-10
 Identities = 14/101 (13%), Positives = 26/101 (25%), Gaps = 6/101 (5%)

Query: 86  VCFDVDSTVCVDEGIDELAEFCGAGKAVAEWTARAMGGSVPFEEALAARLSLFKPSLSQV 145
            C D++  + V E     AE  G      +           ++  +  RL +      ++
Sbjct: 5   ACLDLEGVL-VPEIWIAFAEKTGI-----DALKATTRDIPDYDVLMKQRLRILDEHGLKL 58

Query: 146 QDFLEKRPPRLSPGIDELVKKLKANNKNVYLISGGFRHMIN 186
            D  E                       V ++S  F     
Sbjct: 59  GDIQEVIATLKPLEGAVEFVDWLRERFQVVILSDTFYEFSQ 99

>d2bdua1 c.108.1.21 (A:7-297) Cytosolic 5'-nucleotidase III {Mouse (Mus musculus) [TaxId: 10090]} Length = 291

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Pyrimidine 5'-nucleotidase (UMPH-1)
domain: Cytosolic 5'-nucleotidase III
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 44.2 bits (104), Expect = 3e-06
 Identities = 17/137 (12%), Positives = 39/137 (28%), Gaps = 27/137 (19%)

Query: 85  AVCFDVDSTVCVDEGIDELAEFCG----AGKAVAE------------WTARAMGGSVPFE 128
            +  D D T+       +    C       K V +            + A  +   +  E
Sbjct: 39  QIITDFDMTLSRFSYNGKRCPTCHNIIDNCKLVTDECRRKLLQLKEQYYAIEVDPVLTVE 98

Query: 129 EALAA----------RLSLFKPSLSQVQDFLEKRPPRLSPGIDELVKKLKANNKNVYLIS 178
           E               L       +++++ +      L  G +    KL+ +   V++ S
Sbjct: 99  EKFPYMVEWYTKSHGLLIEQGIPKAKLKEIVADSDVMLKEGYENFFGKLQQHGIPVFIFS 158

Query: 179 GGFRHMIN-ILNILKWD 194
            G   ++  ++      
Sbjct: 159 AGIGDVLEEVIRQAGVY 175

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	203
d1nnla_	217	Phosphoserine phosphatase {Human (Homo sapiens) [T	99.84
d1te2a_	218	Phosphatase YniC {Escherichia coli [TaxId: 562]}	99.65
d2feaa1	226	2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate	99.62
d2go7a1	204	Hypothetical protein SP2064 {Streptococcus pneumon	99.61
d2hsza1	224	Phosphoglycolate phosphatase Gph {Haemophilus somn	99.61
d2fi1a1	187	Putative hydrolase SP0805 {Streptococcus pneumonia	99.57
d2hdoa1	207	Phosphoglycolate phosphatase {Lactobacillus planta	99.55
d1o08a_	221	beta-Phosphoglucomutase {Lactococcus lactis [TaxId	99.48
d2ah5a1	210	predicted phosphatase SP0104 {Streptococcus pneumo	99.45
d1swva_	257	Phosphonoacetaldehyde hydrolase {Bacillus cereus [	99.45
d1j97a_	210	Phosphoserine phosphatase {Archaeon Methanococcus	99.44
d2fdra1	222	Hypothetical protein Atu0790 {Agrobacterium tumefa	99.38
d2hcfa1	228	Hypothetical protein CT1708 {Chlorobium tepidum [T	99.36
d1x42a1	230	Hypothetical protein PH0459 {Archaeon Pyrococcus h	99.29
d2gfha1	247	N-acylneuraminate-9-phosphatase NANP {Mouse (Mus m	99.21
d1zrna_	220	L-2-Haloacid dehalogenase, HAD {Pseudomonas sp., s	99.15
d1qq5a_	245	L-2-Haloacid dehalogenase, HAD {Xanthobacter autot	99.1
d1zs9a1	253	E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]}	99.05
d1rkua_	206	Homoserine kinase ThrH {Pseudomonas aeruginosa [Ta	99.01
d1u7pa_	164	Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mu	99.0
d1zd3a1	225	Epoxide hydrolase, N-terminal domain {Human (Homo	98.93
d2b0ca1	197	Putative phosphatase YihX {Escherichia coli [TaxId	98.9
d2bdua1	291	Cytosolic 5'-nucleotidase III {Mouse (Mus musculus	98.87
d1cr6a1	222	Epoxide hydrolase, N-terminal domain {Mouse (Mus m	98.78
d1ltqa1	149	Polynucleotide kinase, phosphatase domain {Bacteri	98.54
d1rkqa_	271	Hypothetical protein YidA {Escherichia coli [TaxId	98.13
d1vjra_	261	Hypothetical protein TM1742 {Thermotoga maritima [	98.11
d1nrwa_	285	Hypothetical protein YwpJ {Bacillus subtilis [TaxI	98.03
d2c4na1	250	NagD {Escherichia coli [TaxId: 562]}	98.03
d1l6ra_	225	Phosphoglycolate phosphatase, PGPase {Archaeon The	98.02
d2g80a1	225	Protein UTR4 {Baker's yeast (Saccharomyces cerevis	98.02
d2fpwa1	161	Histidine biosynthesis bifunctional protein HisB,	98.01
d2gmwa1	182	D,D-heptose 1,7-bisphosphate phosphatase GmhB {Esc	98.01
d1wr8a_	230	Phosphoglycolate phosphatase, PGPase {Pyrococcus h	98.01
d1yv9a1	253	Putative hydrolase EF1188 {Enterococcus faecalis [	97.98
d1wzca1	243	Putative mannosyl-3-phosphoglycerate phosphatase M	97.81
d2o2xa1	209	Hypothetical protein Mll2559 {Mesorhizobium loti [	97.79
d1xvia_	232	Putative mannosyl-3-phosphoglycerate phosphatase M	97.78
d1wvia_	253	Putative phosphatase SMU.1415c {Streptococcus muta	97.77
d1xpja_	124	Hypothetical protein VC0232 {Vibrio cholerae [TaxI	97.62
d1rlma_	269	Sugar phosphatase SupH (YbiV) {Escherichia coli [T	97.6
d1q92a_	195	5'(3')-deoxyribonucleotidase (dNT-2) {Human (Homo	97.5
d2b30a1	283	PFL1270w orthologue {Plasmodium vivax [TaxId: 5855	97.44
d1nf2a_	267	Hypothetical protein TM0651 {Thermotoga maritima [	97.43
d2amya1	243	Phosphomannomutase 2 {Human (Homo sapiens) [TaxId:	97.34
d2obba1	122	Hypothetical protein BT0820 {Bacteroides thetaiota	97.28
d1qyia_	380	Hypothetical protein MW1667 (SA1546) {Staphylococc	96.99
d2b82a1	209	Class B acid phosphatase, AphA {Escherichia coli [	96.84
d2b8ea1	135	Cation-transporting ATPase {Archaeon Archaeoglobus	96.38
d1s2oa1	244	Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc	96.29
d2fuea1	244	Phosphomannomutase 1 {Human (Homo sapiens) [TaxId:	95.01
d2bdea1	458	Cytosolic IMP-GMP specific 5'-nucleotidase {Legion	94.91
d2rbka1	260	Sugar-phosphate phosphatase BT4131 {Bacteroides th	94.87
d1wpga2	168	Calcium ATPase, catalytic domain P {Rabbit (Orycto	94.84
d1y8aa1	308	Hypothetical protein AF1437 {Archaeon Archaeoglobu	94.71
d1u02a_	229	Trehalose-6-phosphate phosphatase related protein	93.71
d1k1ea_	177	Probable phosphatase YrbI {Haemophilus influenzae,	93.28
d1qyia_	380	Hypothetical protein MW1667 (SA1546) {Staphylococc	90.24
d1ta0a_	181	Carboxy-terminal domain RNA polymerase II polypept	86.76
d1yj5a1	195	5' polynucleotide kinase-3' phosphatase, middle do	85.42
d1yj5a1	195	5' polynucleotide kinase-3' phosphatase, middle do	83.2

>d1nnla_ c.108.1.4 (A:) Phosphoserine phosphatase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Phosphoserine phosphatase
domain: Phosphoserine phosphatase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.84  E-value=7.5e-21  Score=154.29  Aligned_cols=123  Identities=53%  Similarity=0.885  Sum_probs=96.5

Q ss_pred             HHHhhccCCcEEEEECCCcccccchHHHHHHHcCCCccHHHHHHHHhCCCCCHHHHHHHHHhccCCCHHHHHHHHHhCCC
Q 028799           75 EVLQLWRTADAVCFDVDSTVCVDEGIDELAEFCGAGKAVAEWTARAMGGSVPFEEALAARLSLFKPSLSQVQDFLEKRPP  154 (203)
Q Consensus        75 ~~~~~~~~~kaVIFD~DGTLiDse~~~~la~~~G~~~~~~~~~~~~~gG~~~~~e~l~~~~~~~~~~~e~l~~~~~~~~~  154 (203)
                      |+-++.++.++|+|||||||+|+++|++++..+|...+..+++.+++.|.+++.+.+..+...+++..+++.+.+.+...
T Consensus         2 ~~~~~~~~~~aV~FD~DGTLi~~e~~~~l~~~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (217)
T d1nnla_           2 ELRKLFYSADAVCFDVDSTVIREEGIDELAKICGVEDAVSEMTRRAMGGAVPFKAALTERLALIQPSREQVQRLIAEQPP   81 (217)
T ss_dssp             HHHHHHHHCSEEEEETBTTTBSSCHHHHHHHHTTCTTTC------------CHHHHHHHHHHHHCCCHHHHHHHHHHSCC
T ss_pred             chhHhhCCCCEEEEcCccccCCccHHHHHHHHcCChHHHHHHHHHHHcCCCCHHHHHHHHHHhcccchHHHHHHHHhhcc
Confidence            46678888999999999999999999999999998877777888888899999999988887777766555554444457


Q ss_pred             CCCCcHHHHHHHHHHCCCeEEEEcCCCHHHHHHHH-HcCCCccc
Q 028799          155 RLSPGIDELVKKLKANNKNVYLISGGFRHMINILN-ILKWDVLK  197 (203)
Q Consensus       155 ~l~PG~~elL~~Lk~~G~~vaIVTn~~~~~i~~ll-~lGL~~~~  197 (203)
                      .++||+.+++++|+++|++++|||+++..++++++ .+|++...
T Consensus        82 ~l~pg~~~~i~~lk~~G~~~~ivS~~~~~~v~~i~~~lgi~~~~  125 (217)
T d1nnla_          82 HLTPGIRELVSRLQERNVQVFLISGGFRSIVEHVASKLNIPATN  125 (217)
T ss_dssp             CBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCCGGG
T ss_pred             ccCHHHHHHHHHHHhCCCEEEEECCCchHHHHHHHHHhCCcccc
Confidence            89999999999999999999999999999999999 99998643

>d1te2a_ c.108.1.6 (A:) Phosphatase YniC {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: Phosphatase YniC
species: Escherichia coli [TaxId: 562]

Probab=99.65  E-value=2.4e-16  Score=124.95  Aligned_cols=120  Identities=18%  Similarity=0.143  Sum_probs=80.9

Q ss_pred             cCCcEEEEECCCcccccch-----HHHHHHHcCCCccHHHHHHHHhCCCCCHHHHHHHHHhcc--CC-CHHHHH------
Q 028799           81 RTADAVCFDVDSTVCVDEG-----IDELAEFCGAGKAVAEWTARAMGGSVPFEEALAARLSLF--KP-SLSQVQ------  146 (203)
Q Consensus        81 ~~~kaVIFD~DGTLiDse~-----~~~la~~~G~~~~~~~~~~~~~gG~~~~~e~l~~~~~~~--~~-~~e~l~------  146 (203)
                      ++++||||||||||+||+.     +..+++.+|.+........++++  ......+.......  .. ..+.+.      
T Consensus         1 ~~i~a~iFD~DGTL~dt~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (218)
T d1te2a_           1 RQILAAIFDMDGLLIDSEPLWDRAELDVMASLGVDISRRNELPDTLG--LRIDMVVDLWYARQPWNGPSRQEVVERVIAR   78 (218)
T ss_dssp             CCCCEEEECCBTTTBCCHHHHHHHHHHHHHHTTCCGGGGGGSCCCTT--CCHHHHHHHHHHHSCCSSSCHHHHHHHHHHH
T ss_pred             CcceEEEECCCCcccCCHHHHHHHHHHHHHHcCCCCCHHHHHHHHhC--CCccchhhhhhhcccccchhHHHHHHHHHHH
Confidence            5789999999999999865     34456677876443222233333  23333332222211  11 222211      


Q ss_pred             --HHHHhCCCCCCCcHHHHHHHHHHCCCeEEEEcCCCHHHHHHHH-HcCCCccceEEecC
Q 028799          147 --DFLEKRPPRLSPGIDELVKKLKANNKNVYLISGGFRHMINILN-ILKWDVLKVIQITS  203 (203)
Q Consensus       147 --~~~~~~~~~l~PG~~elL~~Lk~~G~~vaIVTn~~~~~i~~ll-~lGL~~~~~i~it~  203 (203)
                        +.+.. ..+++||+.++|++|+++|++++|+||+++..++.++ .+|+..++...++|
T Consensus        79 ~~~~~~~-~~~~~pg~~~~l~~L~~~g~~~~i~T~~~~~~~~~~l~~~~l~~~F~~i~~~  137 (218)
T d1te2a_          79 AISLVEE-TRPLLPGVREAVALCKEQGLLVGLASASPLHMLEKVLTMFDLRDSFDALASA  137 (218)
T ss_dssp             HHHHHHH-HCCBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGCSEEEEC
T ss_pred             HHHhhhc-cccccchHHHHHHHhhhccccccccccccccccccccccccccccccccccc
Confidence              11222 2578999999999999999999999999999999999 99999888877764

>d2feaa1 c.108.1.20 (A:2-227) 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: MtnX-like
domain: 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX
species: Bacillus subtilis [TaxId: 1423]

Probab=99.62  E-value=1.1e-15  Score=121.83  Aligned_cols=114  Identities=14%  Similarity=0.239  Sum_probs=93.3

Q ss_pred             CCcEEEEECCCcccccchHHHHHHHcCCCccHHHHHHHHhCCCCCHHHHHHHHHhccCC-CHHHHHHHHHhCCCCCCCcH
Q 028799           82 TADAVCFDVDSTVCVDEGIDELAEFCGAGKAVAEWTARAMGGSVPFEEALAARLSLFKP-SLSQVQDFLEKRPPRLSPGI  160 (203)
Q Consensus        82 ~~kaVIFD~DGTLiDse~~~~la~~~G~~~~~~~~~~~~~gG~~~~~e~l~~~~~~~~~-~~e~l~~~~~~~~~~l~PG~  160 (203)
                      +..+|+|||||||++++.++.+++.++.. ...++...+..|..++.+.+..++....+ ..+.+...+.. ..+++||+
T Consensus         3 ~k~lVifD~DGTL~~~d~~~~~~~~~~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~pg~   80 (226)
T d2feaa1           3 RKPFIICDFDGTITMNDNIINIMKTFAPP-EWMALKDGVLSKTLSIKEGVGRMFGLLPSSLKEEITSFVLE-DAKIREGF   80 (226)
T ss_dssp             CCEEEEECCTTTTBSSCHHHHHHHHHSCT-HHHHHHHHHHTTSSCHHHHHHHHHTTSBGGGHHHHHHHHHH-HCCBCTTH
T ss_pred             CCeEEEEeCCCCCcCchHHHHHHHHHCcc-hHHHHHHHHHcCcccHHHHHHHHHHHhccccHHHHHHHHHh-ccchhHHH
Confidence            44679999999999999999999999865 34567777788888999888888766544 34445444444 26899999


Q ss_pred             HHHHHHHHHCCCeEEEEcCCCHHHHHHHH-HcCCCccc
Q 028799          161 DELVKKLKANNKNVYLISGGFRHMINILN-ILKWDVLK  197 (203)
Q Consensus       161 ~elL~~Lk~~G~~vaIVTn~~~~~i~~ll-~lGL~~~~  197 (203)
                      .++++.|+++|++++|+||+.+..++.++ ++|+..++
T Consensus        81 ~~~l~~L~~~g~~~~ivS~~~~~~i~~~l~~l~~~~~~  118 (226)
T d2feaa1          81 REFVAFINEHEIPFYVISGGMDFFVYPLLEGIVEKDRI  118 (226)
T ss_dssp             HHHHHHHHHHTCCEEEEEEEEHHHHHHHHTTTSCGGGE
T ss_pred             HHHHHHHHhcccccccCCcchhhhHHHHHHHcCCccce
Confidence            99999999999999999999999999999 99987654

>d2go7a1 c.108.1.6 (A:3-206) Hypothetical protein SP2064 {Streptococcus pneumoniae [TaxId: 1313]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: Hypothetical protein SP2064
species: Streptococcus pneumoniae [TaxId: 1313]

Probab=99.61  E-value=2.5e-15  Score=118.14  Aligned_cols=117  Identities=13%  Similarity=0.052  Sum_probs=80.8

Q ss_pred             cEEEEECCCcccccch-----HHHHHHHcCCCccHHHHHHHHhCCCCCHHHHHHHHHhccCCCHHHHHHH----HHh--C
Q 028799           84 DAVCFDVDSTVCVDEG-----IDELAEFCGAGKAVAEWTARAMGGSVPFEEALAARLSLFKPSLSQVQDF----LEK--R  152 (203)
Q Consensus        84 kaVIFD~DGTLiDse~-----~~~la~~~G~~~~~~~~~~~~~gG~~~~~e~l~~~~~~~~~~~e~l~~~----~~~--~  152 (203)
                      +|++|||||||+|+..     +..+.+.+|.+....+......+  ....+.+...........+.+.++    +..  .
T Consensus         2 ~a~iFD~DGTL~ds~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (204)
T d2go7a1           2 TAFIWDLDGTLLDSYEAILSGIEETFAQFSIPYDKEKVREFIFK--YSVQDLLVRVAEDRNLDVEVLNQVRAQSLAEKNA   79 (204)
T ss_dssp             CEEEECTBTTTEECHHHHHHHHHHHHHHHTCCCCHHHHHHHHHH--SCHHHHHHHHHHHHTCCHHHHHHHHHHHHTTCGG
T ss_pred             EEEEEcCCCcCccCHHHHHHHHHHHHHHcCCCCCHHHHHHhhcc--cccccccccccchhhhhHHHHHHHHHHHHHhhcc
Confidence            5899999999999864     55667778887554444443333  344555544333221133333332    221  2


Q ss_pred             CCCCCCcHHHHHHHHHHCCCeEEEEcCCCHHHHHHHH-HcCCCccceEEecC
Q 028799          153 PPRLSPGIDELVKKLKANNKNVYLISGGFRHMINILN-ILKWDVLKVIQITS  203 (203)
Q Consensus       153 ~~~l~PG~~elL~~Lk~~G~~vaIVTn~~~~~i~~ll-~lGL~~~~~i~it~  203 (203)
                      ...++||+.++|+.|+++|++++|+||++.. +..++ ++|+..++..+++|
T Consensus        80 ~~~~~pgv~~~L~~L~~~g~~~~v~Sn~~~~-~~~~l~~~gl~~~f~~i~~s  130 (204)
T d2go7a1          80 QVVLMPGAREVLAWADESGIQQFIYTHKGNN-AFTILKDLGVESYFTEILTS  130 (204)
T ss_dssp             GCEECTTHHHHHHHHHHTTCEEEEECSSCTH-HHHHHHHHTCGGGEEEEECG
T ss_pred             cCcccchHHhhhhcccccccchhhhcccchh-hhhhhhhccccccccccccc
Confidence            4688999999999999999999999998875 45678 99999988877764

>d2hsza1 c.108.1.6 (A:1-224) Phosphoglycolate phosphatase Gph {Haemophilus somnus [TaxId: 731]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: Phosphoglycolate phosphatase Gph
species: Haemophilus somnus [TaxId: 731]

Probab=99.61  E-value=3.4e-15  Score=117.78  Aligned_cols=122  Identities=13%  Similarity=0.091  Sum_probs=84.4

Q ss_pred             ccCCcEEEEECCCcccccch-----HHHHHHHcCCCccHHHHHHHHhCCCCCHHHHHHHH----HhccC-C-CHHHHH--
Q 028799           80 WRTADAVCFDVDSTVCVDEG-----IDELAEFCGAGKAVAEWTARAMGGSVPFEEALAAR----LSLFK-P-SLSQVQ--  146 (203)
Q Consensus        80 ~~~~kaVIFD~DGTLiDse~-----~~~la~~~G~~~~~~~~~~~~~gG~~~~~e~l~~~----~~~~~-~-~~e~l~--  146 (203)
                      |+++|+|+||+||||+|++.     +...++.+|.+....+....+.+  ..........    ..... . ..+...  
T Consensus         1 M~~~k~iiFD~DGTL~Ds~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (224)
T d2hsza1           1 MTQFKLIGFDLDGTLVNSLPDLALSINSALKDVNLPQASENLVMTWIG--NGADVLSQRAVDWACKQAEKELTEDEFKYF   78 (224)
T ss_dssp             CSSCSEEEECSBTTTEECHHHHHHHHHHHHHHTTCCCCCHHHHHHHCS--SCHHHHHHHHHHHHHHHHTCCCCHHHHHHH
T ss_pred             CCCCCEEEEeCCCCcccCHHHHHHHHHHHHHHCCCCCCcHHHHHHHhh--hhhhhhhhhhhhhhhhhhhhhhhHHHHHHH
Confidence            56899999999999999875     45566778877655555555555  2222221111    11111 1 221111  


Q ss_pred             -----HHHH---hCCCCCCCcHHHHHHHHHHCCCeEEEEcCCCHHHHHHHH-HcCCCccceEEecC
Q 028799          147 -----DFLE---KRPPRLSPGIDELVKKLKANNKNVYLISGGFRHMINILN-ILKWDVLKVIQITS  203 (203)
Q Consensus       147 -----~~~~---~~~~~l~PG~~elL~~Lk~~G~~vaIVTn~~~~~i~~ll-~lGL~~~~~i~it~  203 (203)
                           .+..   .....++||+.++|++|++.|++++|+||+++..++.++ .+||..++.-.|+|
T Consensus        79 ~~~~~~~~~~~~~~~~~l~~~~~~~L~~L~~~g~~~~i~tn~~~~~~~~~l~~~gl~~~f~~~~~~  144 (224)
T d2hsza1          79 KRQFGFYYGENLCNISRLYPNVKETLEALKAQGYILAVVTNKPTKHVQPILTAFGIDHLFSEMLGG  144 (224)
T ss_dssp             HHHHHHHHHHHTTSSCEECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGCSEEECT
T ss_pred             HHHHHHHHHHhhccccchHHHHHHHHHHHhccCCcccccccccHHHHHHHHHhcCchhhccccccc
Confidence                 1111   124689999999999999999999999999999999999 99999988877764

>d2fi1a1 c.108.1.3 (A:4-190) Putative hydrolase SP0805 {Streptococcus pneumoniae [TaxId: 1313]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Phosphonoacetaldehyde hydrolase-like
domain: Putative hydrolase SP0805
species: Streptococcus pneumoniae [TaxId: 1313]

Probab=99.57  E-value=1.2e-14  Score=113.50  Aligned_cols=119  Identities=13%  Similarity=0.134  Sum_probs=80.3

Q ss_pred             cCCcEEEEECCCcccccch-----HHHHHHHcCCCccHHHHHHHHhCCCCCHHHHHHHHHhccCCCHHHHHHHHH-h-CC
Q 028799           81 RTADAVCFDVDSTVCVDEG-----IDELAEFCGAGKAVAEWTARAMGGSVPFEEALAARLSLFKPSLSQVQDFLE-K-RP  153 (203)
Q Consensus        81 ~~~kaVIFD~DGTLiDse~-----~~~la~~~G~~~~~~~~~~~~~gG~~~~~e~l~~~~~~~~~~~e~l~~~~~-~-~~  153 (203)
                      +++++|+||+||||+|+..     +..+++.+|+...... ..+.++  .+....+...........+.+.+.+. . ..
T Consensus         1 M~~k~viFD~DGTL~dt~~~~~~~~~~~~~~~g~~~~~~~-~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   77 (187)
T d2fi1a1           1 MKYHDYIWDLGGTLLDNYETSTAAFVETLALYGITQDHDS-VYQALK--VSTPFAIETFAPNLENFLEKYKENEARELEH   77 (187)
T ss_dssp             CCCSEEEECTBTTTBCHHHHHHHHHHHHHHHTTCCCCHHH-HHHHHH--HCHHHHHHHHCTTCTTHHHHHHHHHHHHTTS
T ss_pred             CCCCEEEEeCCCCcccCHHHHHHHHHHHHHHcCCCccHHH-HHhhhh--ccchhhhhhhhHHHHHHHHHHHHHHHHHhhc
Confidence            3689999999999999754     4556677888755333 333343  23333333221111111233333222 1 24


Q ss_pred             CCCCCcHHHHHHHHHHCCCeEEEEcCCCHHHHHHHH-HcCCCccceEEecC
Q 028799          154 PRLSPGIDELVKKLKANNKNVYLISGGFRHMINILN-ILKWDVLKVIQITS  203 (203)
Q Consensus       154 ~~l~PG~~elL~~Lk~~G~~vaIVTn~~~~~i~~ll-~lGL~~~~~i~it~  203 (203)
                      ..++||+.++|+.|+++|++++|+||+.....+ .+ ++++..++..+++|
T Consensus        78 ~~~~~gv~~~l~~l~~~g~~~~i~Sn~~~~~~~-~l~~~~l~~~fd~i~~~  127 (187)
T d2fi1a1          78 PILFEGVSDLLEDISNQGGRHFLVSHRNDQVLE-ILEKTSIAAYFTEVVTS  127 (187)
T ss_dssp             CCBCTTHHHHHHHHHHTTCEEEEECSSCTHHHH-HHHHTTCGGGEEEEECG
T ss_pred             CcccchhHHHHHHHHhhhccccccccCccchhh-hhhhhcccccccccccc
Confidence            789999999999999999999999999887665 67 99999988877764

>d2hdoa1 c.108.1.6 (A:1-207) Phosphoglycolate phosphatase {Lactobacillus plantarum [TaxId: 1590]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: Phosphoglycolate phosphatase
species: Lactobacillus plantarum [TaxId: 1590]

Probab=99.55  E-value=4.7e-15  Score=116.99  Aligned_cols=117  Identities=17%  Similarity=0.275  Sum_probs=82.2

Q ss_pred             CCcEEEEECCCcccccch-----HHHHHHHcCCCccHHHHHHHHhCCCCCHHHHHHHHHhccCCCHHH----HHHHHHhC
Q 028799           82 TADAVCFDVDSTVCVDEG-----IDELAEFCGAGKAVAEWTARAMGGSVPFEEALAARLSLFKPSLSQ----VQDFLEKR  152 (203)
Q Consensus        82 ~~kaVIFD~DGTLiDse~-----~~~la~~~G~~~~~~~~~~~~~gG~~~~~e~l~~~~~~~~~~~e~----l~~~~~~~  152 (203)
                      ++|+|+|||||||+||+.     |..+++++|.+....+ ..+.++  .+..+.+... .......+.    +.+++.+.
T Consensus         2 ~~k~viFD~DGTL~ds~~~~~~a~~~~~~~~g~~~~~~~-~~~~~~--~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~   77 (207)
T d2hdoa1           2 TYQALMFDIDGTLTNSQPAYTTVMREVLATYGKPFSPAQ-AQKTFP--MAAEQAMTEL-GIAASEFDHFQAQYEDVMASH   77 (207)
T ss_dssp             CCSEEEECSBTTTEECHHHHHHHHHHHHHTTTCCCCHHH-HHHHTT--SCHHHHHHHT-TCCGGGHHHHHHHHHHHHTTC
T ss_pred             CCcEEEEeCCCCcCcCHHHHHHHHHHHHHHcCCCCCHHH-HHHHhc--chhhhhhhcc-ccchhhHHHHHHHhhhhhccc
Confidence            579999999999999865     4556667887755433 344454  3445544432 111112223    23333322


Q ss_pred             --CCCCCCcHHHHHHHHHHCCCeEEEEcCCCHHHHHHHH-HcCCCccceEEecC
Q 028799          153 --PPRLSPGIDELVKKLKANNKNVYLISGGFRHMINILN-ILKWDVLKVIQITS  203 (203)
Q Consensus       153 --~~~l~PG~~elL~~Lk~~G~~vaIVTn~~~~~i~~ll-~lGL~~~~~i~it~  203 (203)
                        ..+++||+.++|++|++ +++++|+||+++..++.++ ++|+..++..++++
T Consensus        78 ~~~~~~~~g~~~~L~~l~~-~~~~~ivT~~~~~~~~~~l~~~~l~~~f~~i~~~  130 (207)
T d2hdoa1          78 YDQIELYPGITSLFEQLPS-ELRLGIVTSQRRNELESGMRSYPFMMRMAVTISA  130 (207)
T ss_dssp             GGGCEECTTHHHHHHHSCT-TSEEEEECSSCHHHHHHHHTTSGGGGGEEEEECG
T ss_pred             ccccccccchhhhhhhhcc-cccccccccccccccccccccccccccccccccc
Confidence              46899999999999985 7999999999999999999 99999988877764

>d1o08a_ c.108.1.6 (A:) beta-Phosphoglucomutase {Lactococcus lactis [TaxId: 1358]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: beta-Phosphoglucomutase
species: Lactococcus lactis [TaxId: 1358]

Probab=99.48  E-value=1.2e-13  Score=109.31  Aligned_cols=118  Identities=24%  Similarity=0.253  Sum_probs=80.5

Q ss_pred             CCcEEEEECCCcccccch-----HHHHHHHcCCCccHHHHHHHHhCCCCCHHHHHHHHHhccCC--CHHHHHH-------
Q 028799           82 TADAVCFDVDSTVCVDEG-----IDELAEFCGAGKAVAEWTARAMGGSVPFEEALAARLSLFKP--SLSQVQD-------  147 (203)
Q Consensus        82 ~~kaVIFD~DGTLiDse~-----~~~la~~~G~~~~~~~~~~~~~gG~~~~~e~l~~~~~~~~~--~~e~l~~-------  147 (203)
                      |+|+|+||+||||+|++.     +..++..+|.+....++.....+  .+..+.+.........  +.+.+.+       
T Consensus         1 MikaiiFD~DGTL~ds~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (221)
T d1o08a_           1 MFKAVLFDLDGVITDTAEYHFRAWKALAEEIGINGVDRQFNEQLKG--VSREDSLQKILDLADKKVSAEEFKELAKRKND   78 (221)
T ss_dssp             CCCEEEECCBTTTBTHHHHHHHHHHHHHHHTTCCCCCHHHHTTTTT--CCHHHHHHHHHTTSSSCCCHHHHHHHHHHHHH
T ss_pred             CCcEEEEcCCCCeEcCHHHHHHHHHHHHHHcCCCCChHHHHHHHhh--ccchhhhhhccccccccchhhhhhhHHHHHHh
Confidence            689999999999999865     34556677876544444333333  4555555554443321  3333221       


Q ss_pred             HHHh-----CCCCCCCcHHHHHHHHHHCCCeEEEEcCCCHHHHHHHH-HcCCCccceEEecC
Q 028799          148 FLEK-----RPPRLSPGIDELVKKLKANNKNVYLISGGFRHMINILN-ILKWDVLKVIQITS  203 (203)
Q Consensus       148 ~~~~-----~~~~l~PG~~elL~~Lk~~G~~vaIVTn~~~~~i~~ll-~lGL~~~~~i~it~  203 (203)
                      .+.+     ...+++||+.++|+.|++.|++++++||+..  ....+ .+|+..++...+++
T Consensus        79 ~~~~~~~~~~~~~~~~g~~~~l~~l~~~~~~i~i~s~~~~--~~~~l~~~~l~~~f~~i~~~  138 (221)
T d1o08a_          79 NYVKMIQDVSPADVYPGILQLLKDLRSNKIKIALASASKN--GPFLLERMNLTGYFDAIADP  138 (221)
T ss_dssp             HHHHHTTTCCGGGBCTTHHHHHHHHHHTTCEEEECCSCTT--HHHHHHHTTCGGGCSEECCT
T ss_pred             hccccccccccccccCCceeccccccccccceEEEeecch--hhHHHHhhcccccccccccc
Confidence            2211     1357999999999999999999999999864  46777 99999888877764

>d2ah5a1 c.108.1.6 (A:1-210) predicted phosphatase SP0104 {Streptococcus pneumoniae [TaxId: 1313]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: predicted phosphatase SP0104
species: Streptococcus pneumoniae [TaxId: 1313]

Probab=99.45  E-value=6.9e-14  Score=109.84  Aligned_cols=118  Identities=19%  Similarity=0.164  Sum_probs=80.4

Q ss_pred             ccCCcEEEEECCCcccccch-----HHHHHHHcCCCccHHHHHHHHhCCCCCHHHHHHHHHhccCCCHH----HHHHHHH
Q 028799           80 WRTADAVCFDVDSTVCVDEG-----IDELAEFCGAGKAVAEWTARAMGGSVPFEEALAARLSLFKPSLS----QVQDFLE  150 (203)
Q Consensus        80 ~~~~kaVIFD~DGTLiDse~-----~~~la~~~G~~~~~~~~~~~~~gG~~~~~e~l~~~~~~~~~~~e----~l~~~~~  150 (203)
                      |.++++|+||+||||+|+..     +...++.+|.+....+......+  ....+.+...+...  ..+    .....+.
T Consensus         1 M~~ik~VifD~DGTL~ds~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~--~~~~~~~~~~~~~~--~~~~~~~~~~~~~~   76 (210)
T d2ah5a1           1 MTSITAIFFDLDGTLVDSSIGIHNAFTYTFKELGVPSPDAKTIRGFMG--PPLESSFATCLSKD--QISEAVQIYRSYYK   76 (210)
T ss_dssp             CTTCCEEEECSBTTTEECHHHHHHHHHHHHHHHTCCCCCHHHHHHTSS--SCHHHHHHTTSCGG--GHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCccccCHHHHHHHHHHHHHHCCCCCCCHHHHHHhhh--cchhhhccccccch--hhHHHHHHHHHHHH
Confidence            45789999999999999864     45566778876544444444443  34444333221110  111    1222222


Q ss_pred             h---CCCCCCCcHHHHHHHHHHCCCeEEEEcCCCHHHHHHHH-HcCCCccceEEec
Q 028799          151 K---RPPRLSPGIDELVKKLKANNKNVYLISGGFRHMINILN-ILKWDVLKVIQIT  202 (203)
Q Consensus       151 ~---~~~~l~PG~~elL~~Lk~~G~~vaIVTn~~~~~i~~ll-~lGL~~~~~i~it  202 (203)
                      .   ...+++||+.++|+.|+.+ ++++|+||++...++.++ ++|++.++..+++
T Consensus        77 ~~~~~~~~~~~~~~~~l~~l~~~-~~~~i~t~~~~~~~~~~l~~~gl~~~fd~v~~  131 (210)
T d2ah5a1          77 AKGIYEAQLFPQIIDLLEELSSS-YPLYITTTKDTSTAQDMAKNLEIHHFFDGIYG  131 (210)
T ss_dssp             HTGGGSCEECTTHHHHHHHHHTT-SCEEEEEEEEHHHHHHHHHHTTCGGGCSEEEE
T ss_pred             hhhhhcccchhHHHHHHhhhhcc-cchhhcccccchhhhHHHHhhccccccccccc
Confidence            1   2468999999999999876 599999999999999999 9999988776654

>d1swva_ c.108.1.3 (A:) Phosphonoacetaldehyde hydrolase {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Phosphonoacetaldehyde hydrolase-like
domain: Phosphonoacetaldehyde hydrolase
species: Bacillus cereus [TaxId: 1396]

Probab=99.45  E-value=1.7e-13  Score=111.14  Aligned_cols=117  Identities=18%  Similarity=0.189  Sum_probs=74.4

Q ss_pred             CCcEEEEECCCcccccch------HHHHHHHcCCCccHHHHHHHHhCCCCCHHHH-------------HHHHHhccCCCH
Q 028799           82 TADAVCFDVDSTVCVDEG------IDELAEFCGAGKAVAEWTARAMGGSVPFEEA-------------LAARLSLFKPSL  142 (203)
Q Consensus        82 ~~kaVIFD~DGTLiDse~------~~~la~~~G~~~~~~~~~~~~~gG~~~~~e~-------------l~~~~~~~~~~~  142 (203)
                      ++++|+||+||||+|+..      +....+.+|......++ ...++  ..-.+.             +...++.. ...
T Consensus         1 kIkaviFD~dGTL~d~~~~~~~~~~~~~~~~~g~~~~~~~~-~~~~g--~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~   76 (257)
T d1swva_           1 KIEAVIFAWAGTTVDYGCFAPLEVFMEIFHKRGVAITAEEA-RKPMG--LLKIDHVRALTEMPRIASEWNRVFRQL-PTE   76 (257)
T ss_dssp             CCCEEEECSBTTTBSTTCCTTHHHHHHHHHTTTCCCCHHHH-HTTTT--SCHHHHHHHHHHSHHHHHHHHHHHSSC-CCH
T ss_pred             CcEEEEEcCCCCeEeCcchHHHHHHHHHHHHcCCCCCHHHH-HHHhC--CcHHHHHHHHhhhhhhhHHHHHHhccc-CCH
Confidence            589999999999999864      23344566766443322 22222  111111             11112111 121


Q ss_pred             HH-------HHHHHHh---CCCCCCCcHHHHHHHHHHCCCeEEEEcCCCHHHHHHHH-HcCCCccc-eEEec
Q 028799          143 SQ-------VQDFLEK---RPPRLSPGIDELVKKLKANNKNVYLISGGFRHMINILN-ILKWDVLK-VIQIT  202 (203)
Q Consensus       143 e~-------l~~~~~~---~~~~l~PG~~elL~~Lk~~G~~vaIVTn~~~~~i~~ll-~lGL~~~~-~i~it  202 (203)
                      ..       +.+.+.+   ....++||+.++|+.|+++|++++|+||+++..++.++ .+|+..++ ...++
T Consensus        77 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~L~~Lk~~g~~i~i~Tn~~~~~~~~~l~~~~l~~~f~d~~~~  148 (257)
T d1swva_          77 ADIQEMYEEFEEILFAILPRYASPINGVKEVIASLRERGIKIGSTTGYTREMMDIVAKEAALQGYKPDFLVT  148 (257)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGGCCBCTTHHHHHHHHHHTTCEEEEBCSSCHHHHHHHHHHHHHTTCCCSCCBC
T ss_pred             HHHHHHHHHHHHHHHHHhhccCccCCcHHHHHHHHHhcccceeecCCCchhhHHHHHHHHhhcccccccccc
Confidence            11       1222221   13679999999999999999999999999999999999 99998765 55554

>d1j97a_ c.108.1.4 (A:) Phosphoserine phosphatase {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Phosphoserine phosphatase
domain: Phosphoserine phosphatase
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=99.44  E-value=9.4e-13  Score=101.87  Aligned_cols=117  Identities=32%  Similarity=0.471  Sum_probs=90.1

Q ss_pred             cCCcEEEEECCCcccccchHHHHHHHcCCCccHHHHHHHHhCCCCCHHHHHHHHHhccCC-CHHHHHHHHHhCCCCCCCc
Q 028799           81 RTADAVCFDVDSTVCVDEGIDELAEFCGAGKAVAEWTARAMGGSVPFEEALAARLSLFKP-SLSQVQDFLEKRPPRLSPG  159 (203)
Q Consensus        81 ~~~kaVIFD~DGTLiDse~~~~la~~~G~~~~~~~~~~~~~gG~~~~~e~l~~~~~~~~~-~~e~l~~~~~~~~~~l~PG  159 (203)
                      ++.|+|+|||||||+|+++++.+++.+|...........+..+.....+..........+ ........+..  ..+++|
T Consensus         2 ~kkKlv~FDlDGTL~d~es~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~   79 (210)
T d1j97a_           2 KKKKLILFDFDSTLVNNETIDEIAREAGVEEEVKKITKEAMEGKLNFEQSLRKRVSLLKDLPIEKVEKAIKR--ITPTEG   79 (210)
T ss_dssp             CCCCEEEECCCCCCBSSCHHHHHHHHTTCHHHHHHHHHHHHTTSSCHHHHHHHHHHTTTTCBHHHHHHHHHT--CCBCTT
T ss_pred             CCCeEEEEeCCCCcCCchHHHHHHHHcCCcHHHHHHHHHHhcccchhHHHHHHHHHHHhhhHHHHHHHHhhh--hhhhhh
Confidence            568999999999999999999999999987666666666666555655555444444433 33344444444  589999


Q ss_pred             HHHHHHHHHHCCCeEEEEcCCCHHHHHHHH-HcCCCccceE
Q 028799          160 IDELVKKLKANNKNVYLISGGFRHMINILN-ILKWDVLKVI  199 (203)
Q Consensus       160 ~~elL~~Lk~~G~~vaIVTn~~~~~i~~ll-~lGL~~~~~i  199 (203)
                      +.++++.++.+|..++++|++....+.... ..+....+..
T Consensus        80 ~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  120 (210)
T d1j97a_          80 AEETIKELKNRGYVVAVVSGGFDIAVNKIKEKLGLDYAFAN  120 (210)
T ss_dssp             HHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCSEEEEE
T ss_pred             HHHHHHHHHHcCCEEEeecccccccccchhhccchhhhhhh
Confidence            999999999999999999999999998888 8887765543

>d2fdra1 c.108.1.6 (A:3-224) Hypothetical protein Atu0790 {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: Hypothetical protein Atu0790
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=99.38  E-value=6.7e-13  Score=104.90  Aligned_cols=115  Identities=19%  Similarity=0.208  Sum_probs=79.9

Q ss_pred             CCcEEEEECCCcccccch-----HHHHHHHcCCCccHHHHHHHHhCCCCCHHHHHHHHHhccCC--C---HHHHHHHHHh
Q 028799           82 TADAVCFDVDSTVCVDEG-----IDELAEFCGAGKAVAEWTARAMGGSVPFEEALAARLSLFKP--S---LSQVQDFLEK  151 (203)
Q Consensus        82 ~~kaVIFD~DGTLiDse~-----~~~la~~~G~~~~~~~~~~~~~gG~~~~~e~l~~~~~~~~~--~---~e~l~~~~~~  151 (203)
                      .+|+|||||||||+||+.     +...++.+|++....+...++.+  .+..+...........  .   .+.....+..
T Consensus         1 ~~kaviFD~DGtL~dt~~~~~~a~~~~~~~~g~~~~~~~~~~~~~g--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (222)
T d2fdra1           1 GFDLIIFDCDGVLVDSEIIAAQVESRLLTEAGYPISVEEMGERFAG--MTWKNILLQVESEASIPLSASLLDKSEKLLDM   78 (222)
T ss_dssp             CCSEEEECSBTTTBCCHHHHHHHHHHHHHHTTCCCCHHHHHHHHTT--CCHHHHHHHHHHHHCCCCCTHHHHHHHHHHHH
T ss_pred             CceEEEECCCCcccCCHHHHHHHHHHHHHHcCCCCCHHHHHHHHhh--hccccccccccccccccccccchhHHHHHHHH
Confidence            478999999999999976     44566788887665666666555  5666655543332211  2   1222222221


Q ss_pred             ---CCCCCCCcHHHHHHHHHHCCCeEEEEcCCCHHHHHHHH-HcCCCccceEEe
Q 028799          152 ---RPPRLSPGIDELVKKLKANNKNVYLISGGFRHMINILN-ILKWDVLKVIQI  201 (203)
Q Consensus       152 ---~~~~l~PG~~elL~~Lk~~G~~vaIVTn~~~~~i~~ll-~lGL~~~~~i~i  201 (203)
                         ....++||+.++|+.|+.   +.+|+||+....+..++ ++|+..++...+
T Consensus        79 ~~~~~~~~~~g~~~~L~~l~~---~~~i~t~~~~~~~~~~l~~~~l~~~f~~~~  129 (222)
T d2fdra1          79 RLERDVKIIDGVKFALSRLTT---PRCICSNSSSHRLDMMLTKVGLKPYFAPHI  129 (222)
T ss_dssp             HHHHHCCBCTTHHHHHHHCCS---CEEEEESSCHHHHHHHHHHTTCGGGTTTCE
T ss_pred             HhhhccchhhhHHHHhhhccc---cceeeeecchhhhhhhhcccccccccceee
Confidence               136899999999988764   57899999999999999 999988776444

>d2hcfa1 c.108.1.6 (A:2-229) Hypothetical protein CT1708 {Chlorobium tepidum [TaxId: 1097]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: Hypothetical protein CT1708
species: Chlorobium tepidum [TaxId: 1097]

Probab=99.36  E-value=7e-13  Score=105.55  Aligned_cols=51  Identities=18%  Similarity=0.124  Sum_probs=46.1

Q ss_pred             CCCCCCcHHHHHHHHHHCC-CeEEEEcCCCHHHHHHHH-HcCCCccceEEecC
Q 028799          153 PPRLSPGIDELVKKLKANN-KNVYLISGGFRHMINILN-ILKWDVLKVIQITS  203 (203)
Q Consensus       153 ~~~l~PG~~elL~~Lk~~G-~~vaIVTn~~~~~i~~ll-~lGL~~~~~i~it~  203 (203)
                      +..++||+.++|+.|+++| ++++|+||+++..+..++ .+|+..++..++++
T Consensus        89 ~~~~~~g~~~~L~~L~~~g~~~~~v~t~~~~~~~~~~l~~~gl~~~fd~i~~~  141 (228)
T d2hcfa1          89 DITLLEGVRELLDALSSRSDVLLGLLTGNFEASGRHKLKLPGIDHYFPFGAFA  141 (228)
T ss_dssp             GEEECTTHHHHHHHHHTCTTEEEEEECSSCHHHHHHHHHTTTCSTTCSCEECT
T ss_pred             CceecCchHHHHhhhhccccccccccCCCcchhhhhhhhhhcccccccccccc
Confidence            3578999999999999997 899999999999999999 99999988877764

>d1x42a1 c.108.1.1 (A:1-230) Hypothetical protein PH0459 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: HAD-related
domain: Hypothetical protein PH0459
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=99.29  E-value=1e-11  Score=98.85  Aligned_cols=49  Identities=24%  Similarity=0.142  Sum_probs=43.8

Q ss_pred             CCCCCcHHHHHHHHHHCCCeEEEEcCCCHHHHHHHH-HcCCCccceEEecC
Q 028799          154 PRLSPGIDELVKKLKANNKNVYLISGGFRHMINILN-ILKWDVLKVIQITS  203 (203)
Q Consensus       154 ~~l~PG~~elL~~Lk~~G~~vaIVTn~~~~~i~~ll-~lGL~~~~~i~it~  203 (203)
                      ..++||+.++|+.|+ .|++++|+||++...++.++ .+|+..++..+++|
T Consensus        99 ~~~~p~~~~~L~~l~-~~~~i~i~Sn~~~~~~~~~l~~~gl~~~fd~i~~s  148 (230)
T d1x42a1          99 GELYPEVVEVLKSLK-GKYHVGMITDSDTEYLMAHLDALGIKDLFDSITTS  148 (230)
T ss_dssp             CCBCTTHHHHHHHHB-TTBEEEEEESSCHHHHHHHHHHHTCGGGCSEEEEH
T ss_pred             CcccccHHHHHHHhh-ccCceeeeeccccccchhhhccccccccccccccc
Confidence            679999999999997 57999999999999999999 99999887777653

>d2gfha1 c.108.1.6 (A:1-247) N-acylneuraminate-9-phosphatase NANP {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: N-acylneuraminate-9-phosphatase NANP
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.21  E-value=1.8e-11  Score=98.03  Aligned_cols=50  Identities=10%  Similarity=0.095  Sum_probs=44.3

Q ss_pred             CCCCCCcHHHHHHHHHHCCCeEEEEcCCCHHHHHHHH-HcCCCccceEEecC
Q 028799          153 PPRLSPGIDELVKKLKANNKNVYLISGGFRHMINILN-ILKWDVLKVIQITS  203 (203)
Q Consensus       153 ~~~l~PG~~elL~~Lk~~G~~vaIVTn~~~~~i~~ll-~lGL~~~~~i~it~  203 (203)
                      ...++||+.++|+.|+ +|++++|+||++...++..+ .+|+..++.-+++|
T Consensus       107 ~~~~~~~~~~~L~~L~-~~~~l~i~Tn~~~~~~~~~l~~~gl~~~fd~i~~s  157 (247)
T d2gfha1         107 HMILADDVKAMLTELR-KEVRLLLLTNGDRQTQREKIEACACQSYFDAIVIG  157 (247)
T ss_dssp             TCCCCHHHHHHHHHHH-TTSEEEEEECSCHHHHHHHHHHHTCGGGCSEEEEG
T ss_pred             cCccCccHHHHHHHhh-cccceEEeecccchhhhhhhhhccccccccccccc
Confidence            4689999999999998 58999999999999999989 99999887766654

>d1zrna_ c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Pseudomonas sp., strain YL [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: HAD-related
domain: L-2-Haloacid dehalogenase, HAD
species: Pseudomonas sp., strain YL [TaxId: 306]

Probab=99.15  E-value=2.5e-10  Score=89.31  Aligned_cols=121  Identities=12%  Similarity=0.101  Sum_probs=74.5

Q ss_pred             CcEEEEECCCcccccchHHHHHH-HcCCC-ccH----------HHHHHHHhCCCCCHHHHHHHHH----hccC--CCHHH
Q 028799           83 ADAVCFDVDSTVCVDEGIDELAE-FCGAG-KAV----------AEWTARAMGGSVPFEEALAARL----SLFK--PSLSQ  144 (203)
Q Consensus        83 ~kaVIFD~DGTLiDse~~~~la~-~~G~~-~~~----------~~~~~~~~gG~~~~~e~l~~~~----~~~~--~~~e~  144 (203)
                      +|+|+||+||||+|++.....+. .+... ...          ........+.............    ....  .....
T Consensus         2 IKaIiFD~dGTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (220)
T d1zrna_           2 IKGIAFDLYGTLFDVHSVVGRCDEAFPGRGREISALWRQKQLEYTWLRSLMNRYVNFQQATEDALRFTCRHLGLDLDART   81 (220)
T ss_dssp             CCEEEECSBTTTEETHHHHHHHHHHSTTTHHHHHHHHHHHHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHTCCCCHHH
T ss_pred             CEEEEECCCCCcEeCHHHHHHHHHHHHHhchhhhHHHHHHHHHHHhhhhhhccchhHHHHHHhHHHHHHHhhhhhhhHHH
Confidence            78999999999999886433332 22211 000          0111122222233332221111    1111  12222


Q ss_pred             HHHHHH-hCCCCCCCcHHHHHHHHHHCCCeEEEEcCCCHHHHHHHH-HcCCCccceEEecC
Q 028799          145 VQDFLE-KRPPRLSPGIDELVKKLKANNKNVYLISGGFRHMINILN-ILKWDVLKVIQITS  203 (203)
Q Consensus       145 l~~~~~-~~~~~l~PG~~elL~~Lk~~G~~vaIVTn~~~~~i~~ll-~lGL~~~~~i~it~  203 (203)
                      ....+. .....++|++.++++.++++|++++++||+....++.++ ..++..++..+++|
T Consensus        82 ~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~i~tn~~~~~~~~~~~~~~~~~~fd~~~~s  142 (220)
T d1zrna_          82 RSTLCDAYLRLAPFSEVPDSLRELKRRGLKLAILSNGSPQSIDAVVSHAGLRDGFDHLLSV  142 (220)
T ss_dssp             HHHHHHGGGGCEECTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGCSEEEES
T ss_pred             HHHHhhhhccccccchhHHHHHHHHhcCCeEEeecchHHHHHHHHHhhccccccccceeee
Confidence            222222 123679999999999999999999999999999999988 99999888877765

>d1qq5a_ c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Xanthobacter autotrophicus [TaxId: 280]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: HAD-related
domain: L-2-Haloacid dehalogenase, HAD
species: Xanthobacter autotrophicus [TaxId: 280]

Probab=99.10  E-value=9.2e-10  Score=87.15  Aligned_cols=120  Identities=18%  Similarity=0.152  Sum_probs=72.9

Q ss_pred             CCcEEEEECCCcccccchHHHHH-HHcCCC-ccHHH----------HHHHHhCCCCCHHHH----HHHHHhccCC--CHH
Q 028799           82 TADAVCFDVDSTVCVDEGIDELA-EFCGAG-KAVAE----------WTARAMGGSVPFEEA----LAARLSLFKP--SLS  143 (203)
Q Consensus        82 ~~kaVIFD~DGTLiDse~~~~la-~~~G~~-~~~~~----------~~~~~~gG~~~~~e~----l~~~~~~~~~--~~e  143 (203)
                      |+|+|+||+||||+|++.....+ +.++.. ....+          ......+......+.    +.........  ..+
T Consensus         1 MIKaviFD~dGTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (245)
T d1qq5a_           1 MIKAVVFDAYGTLFDVQSVADATERAYPGRGEYITQVWRQKQLEYSWLRALMGRYADFWSVTREALAYTLGTLGLEPDES   80 (245)
T ss_dssp             CCCEEEECTBTTTBCTTTTHHHHHHHSTTCHHHHHHHHHHHHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHTTCCCCHH
T ss_pred             CCeEEEEeCCCCcEeCHHHHHHHHHHHHhhcchhHHHHHHHHhhHHHHHHhhcccccHHHHHHHHHHHHHHHhhhchHHH
Confidence            78999999999999987644333 333221 11100          111122211222221    1121222111  233


Q ss_pred             HHHHHHHhC-CCCCCCcHHHHHHHHHHCCCeEEEEcCCCHHHHHHHH-HcCCCccceEEecC
Q 028799          144 QVQDFLEKR-PPRLSPGIDELVKKLKANNKNVYLISGGFRHMINILN-ILKWDVLKVIQITS  203 (203)
Q Consensus       144 ~l~~~~~~~-~~~l~PG~~elL~~Lk~~G~~vaIVTn~~~~~i~~ll-~lGL~~~~~i~it~  203 (203)
                      ...++.... ...++|++.++|+.|+  |++++++||+....+..++ .+|+..++..+++|
T Consensus        81 ~~~~l~~~~~~~~~~~~~~~~L~~l~--~~~~~v~s~~~~~~~~~~~~~~~~~~~fd~v~~s  140 (245)
T d1qq5a_          81 FLADMAQAYNRLTPYPDAAQCLAELA--PLKRAILSNGAPDMLQALVANAGLTDSFDAVISV  140 (245)
T ss_dssp             HHHHHHGGGGSCCBCTTHHHHHHHHT--TSEEEEEESSCHHHHHHHHHHTTCGGGCSEEEEG
T ss_pred             HHHHHHhcccccccchhhhHHHHHHh--hhceeEEeccchHHHHHHHhhccccccccccccc
Confidence            333443321 3689999999999885  7899999999999999988 99999888777764

>d1zs9a1 c.108.1.22 (A:4-256) E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Enolase-phosphatase E1
domain: E-1 enzyme
species: Human(Homo sapiens) [TaxId: 9606]

Probab=99.05  E-value=2.4e-10  Score=89.79  Aligned_cols=46  Identities=15%  Similarity=0.122  Sum_probs=40.9

Q ss_pred             CCCCCCcHHHHHHHHHHCCCeEEEEcCCCHHHHHHHH-HcCCCccce
Q 028799          153 PPRLSPGIDELVKKLKANNKNVYLISGGFRHMINILN-ILKWDVLKV  198 (203)
Q Consensus       153 ~~~l~PG~~elL~~Lk~~G~~vaIVTn~~~~~i~~ll-~lGL~~~~~  198 (203)
                      ...++||+.++|++|+++|++++|+||+++..+..++ .+|+..++.
T Consensus       125 ~~~~~pg~~e~l~~L~~~g~~l~i~Tn~~~~~~~~~~~~~~~~~~~~  171 (253)
T d1zs9a1         125 KAEFFADVVPAVRKWREAGMKVYIYSSGSVEAQKLLFGHSTEGDILE  171 (253)
T ss_dssp             CBCCCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHTBTTBCCGG
T ss_pred             ccccCCCHHHHHHHHhhccCceeecCCCcHHHHHHHHHHcCcchhhh
Confidence            4678999999999999999999999999999988888 888866543

>d1rkua_ c.108.1.11 (A:) Homoserine kinase ThrH {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Homoserine kinase ThrH
domain: Homoserine kinase ThrH
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.01  E-value=6.3e-10  Score=85.41  Aligned_cols=107  Identities=19%  Similarity=0.273  Sum_probs=80.9

Q ss_pred             CCcEEEEECCCcccccchHHHHHHHcCCCccHHHHHHHHhCCCCCHHHHHHHHHhccCC---CHHHHHHHHHhCCCCCCC
Q 028799           82 TADAVCFDVDSTVCVDEGIDELAEFCGAGKAVAEWTARAMGGSVPFEEALAARLSLFKP---SLSQVQDFLEKRPPRLSP  158 (203)
Q Consensus        82 ~~kaVIFD~DGTLiDse~~~~la~~~G~~~~~~~~~~~~~gG~~~~~e~l~~~~~~~~~---~~e~l~~~~~~~~~~l~P  158 (203)
                      ++|.|+|||||||++ +.|..+++..|...     ...+.+|.+++.+.+..++..+.+   ....+.....  .....|
T Consensus         1 dmkli~fDlDGTLl~-e~~~~~a~~~Gi~~-----~~~tgR~~~~~~~~~~~~v~ll~~~~~~~~~~~~~~~--~~~~~~   72 (206)
T d1rkua_           1 DMEIACLDLEGVLVP-EIWIAFAEKTGIDA-----LKATTRDIPDYDVLMKQRLRILDEHGLKLGDIQEVIA--TLKPLE   72 (206)
T ss_dssp             CCEEEEEESBTTTBC-CHHHHHHHHHTCGG-----GGCCTTTCCCHHHHHHHHHHHHHHTTCCHHHHHHHHT--TCCCCT
T ss_pred             CcEEEEEcCccchHH-HHHHHHHHHcCCHH-----HHHHCCCCCCHHHHHHHHHHHHHhCCCceehhhhhhh--hccccc
Confidence            468999999999998 67888999999743     223445678899988887765532   3333333332  368899


Q ss_pred             cHHHHHHHHHHCCCeEEEEcCCCHHHHHHHH-HcCCCccc
Q 028799          159 GIDELVKKLKANNKNVYLISGGFRHMINILN-ILKWDVLK  197 (203)
Q Consensus       159 G~~elL~~Lk~~G~~vaIVTn~~~~~i~~ll-~lGL~~~~  197 (203)
                      +....+..++ .+++.+++|+++........ .+++....
T Consensus        73 ~~~~~~~~~~-~~~~~~~~s~~~~~~~~~~~~~~~~~~~~  111 (206)
T d1rkua_          73 GAVEFVDWLR-ERFQVVILSDTFYEFSQPLMRQLGFPTLL  111 (206)
T ss_dssp             THHHHHHHHH-TTSEEEEEEEEEHHHHHHHHHHTTCCCEE
T ss_pred             hHHHHHHHhh-cCceEEEeccCchHHHHHHHHHhCCchhh
Confidence            9999998875 78999999999999999988 88876544

>d1u7pa_ c.108.1.17 (A:) Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Magnesium-dependent phosphatase-1, Mdp1
domain: Magnesium-dependent phosphatase-1, Mdp1
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.00  E-value=1.5e-11  Score=94.45  Aligned_cols=49  Identities=16%  Similarity=0.087  Sum_probs=40.6

Q ss_pred             CCCCCCcHHHHHHHHHHCCCeEEEEcCCCHH-HHHHHH-HcCCCccceEEe
Q 028799          153 PPRLSPGIDELVKKLKANNKNVYLISGGFRH-MINILN-ILKWDVLKVIQI  201 (203)
Q Consensus       153 ~~~l~PG~~elL~~Lk~~G~~vaIVTn~~~~-~i~~ll-~lGL~~~~~i~i  201 (203)
                      .++++||+.++|++|+++|++++|+||+++. .++.++ .+++..++....
T Consensus        44 ~~~l~pgv~e~L~~L~~~G~~~~v~S~~~~~~~~~~~l~~~~~~~~~~~~~   94 (164)
T d1u7pa_          44 NIQLYPEVPEVLGRLQSLGVPVAAASRTSEIQGANQLLELFDLGKYFIQRE   94 (164)
T ss_dssp             EECCCTTHHHHHHHHHHTTCCEEEEECCSCHHHHHHHHHHTTCGGGCSEEE
T ss_pred             ccccchHHHHHHHHHHHCCCcEEEEeccccchhhccchhcccccccceeee
Confidence            3689999999999999999999999998765 455667 899887766543

>d1zd3a1 c.108.1.2 (A:2-224) Epoxide hydrolase, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: YihX-like
domain: Epoxide hydrolase, N-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.93  E-value=7.5e-10  Score=85.56  Aligned_cols=49  Identities=4%  Similarity=0.030  Sum_probs=37.1

Q ss_pred             CCCCCcHHHHHHHHHHCCCeEEEEcCCCHHH----HHHHH-HcCCCccceEEec
Q 028799          154 PRLSPGIDELVKKLKANNKNVYLISGGFRHM----INILN-ILKWDVLKVIQIT  202 (203)
Q Consensus       154 ~~l~PG~~elL~~Lk~~G~~vaIVTn~~~~~----i~~ll-~lGL~~~~~i~it  202 (203)
                      ..++||+.++|..|+++|++++++||++...    ..... ..++..++..+++
T Consensus        98 ~~~~~~~~~~l~~L~~~~~~~~i~Tn~~~~~~~~~~~~~~~~~~~~~~fd~i~~  151 (225)
T d1zd3a1          98 RKINRPMLQAALMLRKKGFTTAILTNTWLDDRAERDGLAQLMCELKMHFDFLIE  151 (225)
T ss_dssp             CEECHHHHHHHHHHHHTTCEEEEEECCCCCCSTTHHHHHHHHHHHHTTSSEEEE
T ss_pred             CCCCccHHHHHHHHHhccCccccccccchhhHHHHHHHHhhhcChHhhccEEEe
Confidence            5799999999999999999999999986543    22333 5566666655554

>d2b0ca1 c.108.1.2 (A:8-204) Putative phosphatase YihX {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: YihX-like
domain: Putative phosphatase YihX
species: Escherichia coli [TaxId: 562]

Probab=98.90  E-value=2.2e-10  Score=86.54  Aligned_cols=118  Identities=14%  Similarity=0.022  Sum_probs=71.4

Q ss_pred             EEEEECCCcccccchHH---HHHHHcCCCccH-------HHHHHHHhCCCCCHHHHHHHHHhccC--CCHHHHHHHHHhC
Q 028799           85 AVCFDVDSTVCVDEGID---ELAEFCGAGKAV-------AEWTARAMGGSVPFEEALAARLSLFK--PSLSQVQDFLEKR  152 (203)
Q Consensus        85 aVIFD~DGTLiDse~~~---~la~~~G~~~~~-------~~~~~~~~gG~~~~~e~l~~~~~~~~--~~~e~l~~~~~~~  152 (203)
                      .+|||+||||+|++...   .+....|.....       .........+.....+..........  ...+...+.....
T Consensus         2 l~iFDlDgtL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (197)
T d2b0ca1           2 LYIFDLGNVIVDIDFNRVLGAWSDLTRIPLASLKKSFHMGEAFHQHERGEISDEAFAEALCHEMALPLSYEQFSHGWQAV   81 (197)
T ss_dssp             EEEECCBTTTEEEETHHHHHHHHHHHCCCHHHHHHHCCCCHHHHHHHTTCSCHHHHHHHHHHHHTCCCCHHHHHHHHHTC
T ss_pred             EEEEeCCCCcCcCHHHHHHHHHHHHhCCCHHHHHHHHhcccHHHHHHhccccHHHHHHHHhhhhccchhHHHHHHHHHHh
Confidence            47899999999976422   233334543210       11223333344455444433322221  1333333443333


Q ss_pred             CCCCCCcHHHHHHHHHHCCCeEEEEcCCCHHHHHHHH-Hc-CCCccceEEec
Q 028799          153 PPRLSPGIDELVKKLKANNKNVYLISGGFRHMINILN-IL-KWDVLKVIQIT  202 (203)
Q Consensus       153 ~~~l~PG~~elL~~Lk~~G~~vaIVTn~~~~~i~~ll-~l-GL~~~~~i~it  202 (203)
                      ...+++|+.+++..++.+|++++++||++.......+ .+ |+..++..+++
T Consensus        82 ~~~~~~~~~~l~~~l~~~~~~~~i~t~~~~~~~~~~~~~~~~l~~~fd~v~~  133 (197)
T d2b0ca1          82 FVALRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEEYPEIRDAADHIYL  133 (197)
T ss_dssp             EEEECHHHHHHHHHHHHTTCEEEEEECCCCCTTSCCGGGCHHHHHHCSEEEE
T ss_pred             ccccCchhHHHHHHHHhcCCeEEEEeCccHHHHHHHHHHcccchhhccceee
Confidence            4578999999999999999999999999887766555 44 67666665554

>d2bdua1 c.108.1.21 (A:7-297) Cytosolic 5'-nucleotidase III {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Pyrimidine 5'-nucleotidase (UMPH-1)
domain: Cytosolic 5'-nucleotidase III
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.87  E-value=2.3e-09  Score=90.42  Aligned_cols=111  Identities=12%  Similarity=0.185  Sum_probs=75.6

Q ss_pred             EEEEECCCcccccch-------HHHHHHHc-CCCccH----HHHHHHH----hCCCCCHHHHHHHHHhcc---------C
Q 028799           85 AVCFDVDSTVCVDEG-------IDELAEFC-GAGKAV----AEWTARA----MGGSVPFEEALAARLSLF---------K  139 (203)
Q Consensus        85 aVIFD~DGTLiDse~-------~~~la~~~-G~~~~~----~~~~~~~----~gG~~~~~e~l~~~~~~~---------~  139 (203)
                      .|+.||||||+..+.       .+.+.+.. ..++..    .+++..|    +...+++++.+..+...+         .
T Consensus        39 qVisDFD~Tit~~~~~~~~~~s~~~i~~~~~~~~e~~~~~~~~l~~~y~p~E~d~~~s~~ek~~~m~ew~~~~~~ll~~~  118 (291)
T d2bdua1          39 QIITDFDMTLSRFSYNGKRCPTCHNIIDNCKLVTDECRRKLLQLKEQYYAIEVDPVLTVEEKFPYMVEWYTKSHGLLIEQ  118 (291)
T ss_dssp             EEEECCTTTTBCSEETTEECCCHHHHHHTSTTSCHHHHHHHHHHHHHHHHHHTCSSSCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             EEEecCCCcccccccCCcccchhHHHHhhCCCCCHHHHHHHHHHHhhhcccccCCCCCHHHHHHHHHHHHHHHHHHHHHc
Confidence            477899999997653       34455543 233322    2333333    223456665544332211         0


Q ss_pred             C-CHHHHHHHHHhCCCCCCCcHHHHHHHHHHCCCeEEEEcCCCHHHHHHHH-HcCCCc
Q 028799          140 P-SLSQVQDFLEKRPPRLSPGIDELVKKLKANNKNVYLISGGFRHMINILN-ILKWDV  195 (203)
Q Consensus       140 ~-~~e~l~~~~~~~~~~l~PG~~elL~~Lk~~G~~vaIVTn~~~~~i~~ll-~lGL~~  195 (203)
                      + +.+++.++..+..+.+.||+.+++++|+++|++++|+|+|+..++++++ ++|++.
T Consensus       119 ~l~~~~i~~~v~~~~i~Lr~G~~e~~~~l~~~~i~~~IvSgG~~~~ie~vl~~lg~~~  176 (291)
T d2bdua1         119 GIPKAKLKEIVADSDVMLKEGYENFFGKLQQHGIPVFIFSAGIGDVLEEVIRQAGVYH  176 (291)
T ss_dssp             CCBGGGHHHHHHHSCCCBCBTHHHHHHHHHHHTCCEEEEEEEEHHHHHHHHHHTTCCB
T ss_pred             CCCHHHHHHHHHhcCCCcccCHHHHHHHHHHcCCeEEEEcCChHHHHHHHHHHcCCCc
Confidence            1 3456667776656899999999999999999999999999999999999 999864

>d1cr6a1 c.108.1.2 (A:4-225) Epoxide hydrolase, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: YihX-like
domain: Epoxide hydrolase, N-terminal domain
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.78  E-value=4.8e-10  Score=87.54  Aligned_cols=50  Identities=8%  Similarity=0.050  Sum_probs=39.9

Q ss_pred             CCCCCcHHHHHHHHHHCCCeEEEEcCCCH----HHHHHHH-HcCCCccceEEecC
Q 028799          154 PRLSPGIDELVKKLKANNKNVYLISGGFR----HMINILN-ILKWDVLKVIQITS  203 (203)
Q Consensus       154 ~~l~PG~~elL~~Lk~~G~~vaIVTn~~~----~~i~~ll-~lGL~~~~~i~it~  203 (203)
                      ..++||+.++|++|+++|++++++||+..    ......+ .+|+..++..+++|
T Consensus        96 ~~~~~~~~~~L~~L~~~~~~~~i~s~~~~~~~~~~~~~~~~~~~l~~~fd~i~~s  150 (222)
T d1cr6a1          96 RSINRPMLQAAIALKKKGFTTCIVTNNWLDDGDKRDSLAQMMCELSQHFDFLIES  150 (222)
T ss_dssp             CEECHHHHHHHHHHHHTTCEEEEEECCCCCCSSSHHHHHHHHHHHGGGCSEEEEH
T ss_pred             CCCCccHHHHHHHHHhcCCceEEeeccccccHHHHHHHHHHhcChHhhhceeeeh
Confidence            57999999999999999999999998543    3445555 78888877766653

>d1ltqa1 c.108.1.9 (A:153-301) Polynucleotide kinase, phosphatase domain {Bacteriophage T4 [TaxId: 10665]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: phosphatase domain of polynucleotide kinase
domain: Polynucleotide kinase, phosphatase domain
species: Bacteriophage T4 [TaxId: 10665]

Probab=98.54  E-value=1.6e-08  Score=75.05  Aligned_cols=28  Identities=21%  Similarity=0.236  Sum_probs=26.3

Q ss_pred             CCCCCcHHHHHHHHHHCCCeEEEEcCCC
Q 028799          154 PRLSPGIDELVKKLKANNKNVYLISGGF  181 (203)
Q Consensus       154 ~~l~PG~~elL~~Lk~~G~~vaIVTn~~  181 (203)
                      ..++||+.++|+.|+++|++++++||.+
T Consensus        35 ~~~~p~v~~~l~~l~~~G~~Iii~T~R~   62 (149)
T d1ltqa1          35 DVINPMVVELSKMYALMGYQIVVVSGRE   62 (149)
T ss_dssp             CCBCHHHHHHHHHHHHTTCEEEEEECSC
T ss_pred             CccCHHHHHHHHHHHhccCeEEEEecCc
Confidence            4789999999999999999999999986

>d1rkqa_ c.108.1.10 (A:) Hypothetical protein YidA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Hypothetical protein YidA
species: Escherichia coli [TaxId: 562]

Probab=98.13  E-value=1.6e-06  Score=69.20  Aligned_cols=44  Identities=18%  Similarity=0.142  Sum_probs=34.5

Q ss_pred             CcHHHHHHHHHHCCCeEEEEcCCCHHHHHHHH-HcCCCccceEEe
Q 028799          158 PGIDELVKKLKANNKNVYLISGGFRHMINILN-ILKWDVLKVIQI  201 (203)
Q Consensus       158 PG~~elL~~Lk~~G~~vaIVTn~~~~~i~~ll-~lGL~~~~~i~i  201 (203)
                      |.+.+.|+.|+++|++++++|+.+...+..++ .+++.......|
T Consensus        24 ~~~~~al~~L~~~gi~v~i~TGR~~~~~~~~~~~l~l~~~~~~~i   68 (271)
T d1rkqa_          24 PAVKNAIAAARARGVNVVLTTGRPYAGVHNYLKELHMEQPGDYCI   68 (271)
T ss_dssp             HHHHHHHHHHHHTTCEEEEECSSCGGGTHHHHHHTTCCSTTCEEE
T ss_pred             HHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHhcCcCCCcEEE
Confidence            44456677889999999999999999888888 888876544333

>d1vjra_ c.108.1.14 (A:) Hypothetical protein TM1742 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: NagD-like
domain: Hypothetical protein TM1742
species: Thermotoga maritima [TaxId: 2336]

Probab=98.11  E-value=1.6e-06  Score=69.46  Aligned_cols=39  Identities=23%  Similarity=0.202  Sum_probs=27.0

Q ss_pred             CCcHHHHHHHHHHCCCeEEEEcCCC---HHHHHHHH-HcCCCc
Q 028799          157 SPGIDELVKKLKANNKNVYLISGGF---RHMINILN-ILKWDV  195 (203)
Q Consensus       157 ~PG~~elL~~Lk~~G~~vaIVTn~~---~~~i~~ll-~lGL~~  195 (203)
                      .|++.++|+.|+++|.++.++||+.   .......+ .+|++.
T Consensus        25 i~~a~e~l~~l~~~g~~~~~~TN~~~~~~~~~~~~~~~~g~~~   67 (261)
T d1vjra_          25 LPGSLEFLETLKEKNKRFVFFTNNSSLGAQDYVRKLRNMGVDV   67 (261)
T ss_dssp             CTTHHHHHHHHHHTTCEEEEEESCTTSCHHHHHHHHHHTTCCC
T ss_pred             CchHHHHHHHHHHcCCCEEEEeCCCCCCHHHHHHHHHhhcccc
Confidence            5777888888888899999998754   22333344 677654

>d1nrwa_ c.108.1.10 (A:) Hypothetical protein YwpJ {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Hypothetical protein YwpJ
species: Bacillus subtilis [TaxId: 1423]

Probab=98.03  E-value=5.8e-06  Score=66.22  Aligned_cols=39  Identities=8%  Similarity=0.048  Sum_probs=32.7

Q ss_pred             CcHHHHHHHHHHCCCeEEEEcCCCHHHHHHHH-HcCCCcc
Q 028799          158 PGIDELVKKLKANNKNVYLISGGFRHMINILN-ILKWDVL  196 (203)
Q Consensus       158 PG~~elL~~Lk~~G~~vaIVTn~~~~~i~~ll-~lGL~~~  196 (203)
                      |...+.|+.|+++|++++++||.+...+..++ .++++.+
T Consensus        21 ~~~~~~l~~l~~~Gi~~~i~TGR~~~~~~~~~~~l~~~~~   60 (285)
T d1nrwa_          21 LENENALRQAQRDGIEVVVSTGRAHFDVMSIFEPLGIKTW   60 (285)
T ss_dssp             HHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHGGGTCCCE
T ss_pred             HHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHhCCCcE
Confidence            44566777788899999999999999999999 9998754

>d2c4na1 c.108.1.14 (A:1-250) NagD {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: NagD-like
domain: NagD
species: Escherichia coli [TaxId: 562]

Probab=98.03  E-value=3.7e-06  Score=67.28  Aligned_cols=39  Identities=15%  Similarity=0.123  Sum_probs=26.2

Q ss_pred             CCcHHHHHHHHHHCCCeEEEEcCCC---HHHHHHHH-HcCCCc
Q 028799          157 SPGIDELVKKLKANNKNVYLISGGF---RHMINILN-ILKWDV  195 (203)
Q Consensus       157 ~PG~~elL~~Lk~~G~~vaIVTn~~---~~~i~~ll-~lGL~~  195 (203)
                      +|++.+.++.|+++|++++++||++   +..+...+ .+|++.
T Consensus        21 i~~a~e~i~~l~~~g~~~~~~TN~~~~~~~~~~~~l~~~G~~~   63 (250)
T d2c4na1          21 VPGAAEFLHGIMDKGLPLVLLTNYPSQTGQDLANRFATAGVDV   63 (250)
T ss_dssp             CTTHHHHHHHHHHTTCCEEEEESCCSCCHHHHHHHHHHTTCCC
T ss_pred             CccHHHHHHHHHHCCCcEEEEeCCCCCCHHHHHHHHhhccccc
Confidence            4566777777888888888888765   33333334 677653

>d1l6ra_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Archaeon Thermoplasma acidophilum [TaxId: 2303]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Phosphoglycolate phosphatase, PGPase
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

Probab=98.02  E-value=3.5e-06  Score=65.93  Aligned_cols=39  Identities=18%  Similarity=0.182  Sum_probs=31.6

Q ss_pred             CcHHHHHHHHHHCCCeEEEEcCCCHHHHHHHH-HcCCCcc
Q 028799          158 PGIDELVKKLKANNKNVYLISGGFRHMINILN-ILKWDVL  196 (203)
Q Consensus       158 PG~~elL~~Lk~~G~~vaIVTn~~~~~i~~ll-~lGL~~~  196 (203)
                      |++.+.++.|+++|++++++|+.+...+..+. .+|+...
T Consensus        23 ~~~~~al~~l~~~g~~v~~~TGr~~~~~~~~~~~~~~~~~   62 (225)
T d1l6ra_          23 TKAIESIRSAEKKGLTVSLLSGNVIPVVYALKIFLGINGP   62 (225)
T ss_dssp             HHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCCSC
T ss_pred             HHHHHHHHHHHHCCCEEEEEcCCchhhhHHHHHHcCCCce
Confidence            34456777888999999999999998888888 8888654

>d2g80a1 c.108.1.22 (A:17-241) Protein UTR4 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Enolase-phosphatase E1
domain: Protein UTR4
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.02  E-value=8e-06  Score=62.48  Aligned_cols=45  Identities=16%  Similarity=0.191  Sum_probs=28.9

Q ss_pred             CCCCCcHHHHHHHHHHCCCeEEEEcCCCHHHHHHH-----------H-HcCCCccceEEec
Q 028799          154 PRLSPGIDELVKKLKANNKNVYLISGGFRHMINIL-----------N-ILKWDVLKVIQIT  202 (203)
Q Consensus       154 ~~l~PG~~elL~~Lk~~G~~vaIVTn~~~~~i~~l-----------l-~lGL~~~~~i~it  202 (203)
                      ..+++++.+++.    .+.++++.|++.......+           + .+|+..++..+++
T Consensus        96 ~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~Fd~v~~  152 (225)
T d2g80a1          96 APVYADAIDFIK----RKKRVFIYSSGSVKAQKLLFGYVQDPNAPAHDSLDLNSYIDGYFD  152 (225)
T ss_dssp             BCCCHHHHHHHH----HCSCEEEECSSCHHHHHHHHHSBCCTTCTTSCCBCCGGGCCEEEC
T ss_pred             ccchhhHHHHHh----hHHhhhhhhhccchhhhhhhhhhhhhHHHHHHhcCCccccceeee
Confidence            356666666654    5667899999887765443           2 4567666666554

>d2fpwa1 c.108.1.19 (A:3-163) Histidine biosynthesis bifunctional protein HisB, phosphatase domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Histidinol phosphatase-like
domain: Histidine biosynthesis bifunctional protein HisB, phosphatase domain
species: Escherichia coli [TaxId: 562]

Probab=98.01  E-value=1.1e-06  Score=67.10  Aligned_cols=28  Identities=18%  Similarity=0.256  Sum_probs=26.2

Q ss_pred             CCCCCcHHHHHHHHHHCCCeEEEEcCCC
Q 028799          154 PRLSPGIDELVKKLKANNKNVYLISGGF  181 (203)
Q Consensus       154 ~~l~PG~~elL~~Lk~~G~~vaIVTn~~  181 (203)
                      ..++||+.++|+.|+++|++++++||.+
T Consensus        29 ~~~~pgv~e~L~~L~~~g~~l~i~TNq~   56 (161)
T d2fpwa1          29 LAFEPGVIPQLLKLQKAGYKLVMITNQD   56 (161)
T ss_dssp             CCBCTTHHHHHHHHHHTTEEEEEEEECT
T ss_pred             ceECccHHHHHHHHHHcCCceeeecccc
Confidence            5789999999999999999999999975

>d2gmwa1 c.108.1.19 (A:24-205) D,D-heptose 1,7-bisphosphate phosphatase GmhB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Histidinol phosphatase-like
domain: D,D-heptose 1,7-bisphosphate phosphatase GmhB
species: Escherichia coli [TaxId: 562]

Probab=98.01  E-value=1.7e-06  Score=66.56  Aligned_cols=29  Identities=10%  Similarity=0.153  Sum_probs=26.9

Q ss_pred             CCCCCcHHHHHHHHHHCCCeEEEEcCCCH
Q 028799          154 PRLSPGIDELVKKLKANNKNVYLISGGFR  182 (203)
Q Consensus       154 ~~l~PG~~elL~~Lk~~G~~vaIVTn~~~  182 (203)
                      .+++||+.++|+.|+++|++++|+||.+.
T Consensus        26 ~~~~~gv~e~l~~L~~~g~~~~ivTNq~~   54 (182)
T d2gmwa1          26 FEFIDGVIDAMRELKKMGFALVVVTNQSG   54 (182)
T ss_dssp             CCBCTTHHHHHHHHHHTTCEEEEEEECTH
T ss_pred             eeECCCHHHHHHHHhhcCchhhhhhccch
Confidence            47899999999999999999999999863

>d1wr8a_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Phosphoglycolate phosphatase, PGPase
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=98.01  E-value=7.9e-06  Score=62.84  Aligned_cols=37  Identities=8%  Similarity=0.125  Sum_probs=30.0

Q ss_pred             HHHHHHHHHHCCCeEEEEcCCCHHHHHHHH-HcCCCcc
Q 028799          160 IDELVKKLKANNKNVYLISGGFRHMINILN-ILKWDVL  196 (203)
Q Consensus       160 ~~elL~~Lk~~G~~vaIVTn~~~~~i~~ll-~lGL~~~  196 (203)
                      +.+.|+.|+++|++++++|+.+...++.+. ..++...
T Consensus        24 ~~~~l~~l~~~gi~v~~~TGR~~~~~~~~~~~~~~~~~   61 (230)
T d1wr8a_          24 ALEAIRRAESLGIPIMLVTGNTVQFAEAASILIGTSGP   61 (230)
T ss_dssp             HHHHHHHHHHTTCCEEEECSSCHHHHHHHHHHHTCCSC
T ss_pred             HHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHhcCCCcc
Confidence            455666778899999999999999888888 7777654

>d1yv9a1 c.108.1.14 (A:4-256) Putative hydrolase EF1188 {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: NagD-like
domain: Putative hydrolase EF1188
species: Enterococcus faecalis [TaxId: 1351]

Probab=97.98  E-value=3.1e-06  Score=67.71  Aligned_cols=39  Identities=13%  Similarity=0.237  Sum_probs=26.2

Q ss_pred             CCcHHHHHHHHHHCCCeEEEEcCCC----HHHHHHHH-HcCCCc
Q 028799          157 SPGIDELVKKLKANNKNVYLISGGF----RHMINILN-ILKWDV  195 (203)
Q Consensus       157 ~PG~~elL~~Lk~~G~~vaIVTn~~----~~~i~~ll-~lGL~~  195 (203)
                      .|++.+.|+.|++.|++++++||..    ....+.+. .+|+..
T Consensus        20 i~~a~~~i~~l~~~g~~~~~~Tn~s~~~~~~~~~~L~~~~~~~~   63 (253)
T d1yv9a1          20 IPAGKRFVERLQEKDLPFLFVTNNTTKSPETVAQRLANEFDIHV   63 (253)
T ss_dssp             CHHHHHHHHHHHHTTCCEEEEECCCSSCHHHHHHHHHHHSCCCC
T ss_pred             CccHHHHHHHHHHCCCCEEEEeCCCCCCHHHHHHHHHHhcCCcc
Confidence            3566777888888999999999754    22333444 556644

>d1wzca1 c.108.1.10 (A:1-243) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP)
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=97.81  E-value=1.1e-05  Score=62.73  Aligned_cols=36  Identities=14%  Similarity=0.085  Sum_probs=30.3

Q ss_pred             HHHHHHHHCCCeEEEEcCCCHHHHHHHH-HcCCCccc
Q 028799          162 ELVKKLKANNKNVYLISGGFRHMINILN-ILKWDVLK  197 (203)
Q Consensus       162 elL~~Lk~~G~~vaIVTn~~~~~i~~ll-~lGL~~~~  197 (203)
                      +.|+.|+++|++++++|+.+...+..++ .+++..+.
T Consensus        24 ~ai~~l~~~G~~~~~aTGR~~~~~~~~~~~~~~~~~~   60 (243)
T d1wzca1          24 PIIEELKDMGFEIIFNSSKTRAEQEYYRKELEVETPF   60 (243)
T ss_dssp             HHHHHHHHTTEEEEEECSSCHHHHHHHHHHHTCCSCE
T ss_pred             HHHHHHHHCCCEEEEEeCCCHHHHHHHHHHhcccccc
Confidence            4566778899999999999999999988 88887543

>d2o2xa1 c.108.1.19 (A:8-216) Hypothetical protein Mll2559 {Mesorhizobium loti [TaxId: 381]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Histidinol phosphatase-like
domain: Hypothetical protein Mll2559
species: Mesorhizobium loti [TaxId: 381]

Probab=97.79  E-value=7.6e-06  Score=64.86  Aligned_cols=28  Identities=11%  Similarity=0.083  Sum_probs=25.7

Q ss_pred             CCCCCcHHHHHHHHHHCCCeEEEEcCCC
Q 028799          154 PRLSPGIDELVKKLKANNKNVYLISGGF  181 (203)
Q Consensus       154 ~~l~PG~~elL~~Lk~~G~~vaIVTn~~  181 (203)
                      .+++||+.++|+.|+++|++++|+||.+
T Consensus        47 ~~l~pgv~e~L~~L~~~G~~l~IvTNQ~   74 (209)
T d2o2xa1          47 IVLRPQMLPAIATANRAGIPVVVVTNQS   74 (209)
T ss_dssp             CCBCGGGHHHHHHHHHHTCCEEEEEECH
T ss_pred             eEecccHHHHHHHHHhhCCeEEEecccc
Confidence            4789999999999999999999999943

>d1xvia_ c.108.1.10 (A:) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP)
species: Escherichia coli [TaxId: 562]

Probab=97.78  E-value=4.1e-05  Score=58.56  Aligned_cols=40  Identities=20%  Similarity=0.136  Sum_probs=33.2

Q ss_pred             CcHHHHHHHHHHCCCeEEEEcCCCHHHHHHHH-HcCCCccc
Q 028799          158 PGIDELVKKLKANNKNVYLISGGFRHMINILN-ILKWDVLK  197 (203)
Q Consensus       158 PG~~elL~~Lk~~G~~vaIVTn~~~~~i~~ll-~lGL~~~~  197 (203)
                      +.+.+.|+.|+++|++++++|+.+...+..++ .++++...
T Consensus        24 ~~~~~al~~l~~~Gi~~~i~TGR~~~~~~~~~~~~~~~~~~   64 (232)
T d1xvia_          24 QPAAPWLTRLREANVPVILCSSKTSAEMLYLQKTLGLQGLP   64 (232)
T ss_dssp             CTTHHHHHHHHHTTCCEEEECSSCHHHHHHHHHHTTCTTSC
T ss_pred             HHHHHHHHHHHHCCCEEEEEeCCChhhchhHHHHhccCCce
Confidence            34457788889999999999999999999988 99987543

>d1wvia_ c.108.1.14 (A:) Putative phosphatase SMU.1415c {Streptococcus mutans [TaxId: 1309]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: NagD-like
domain: Putative phosphatase SMU.1415c
species: Streptococcus mutans [TaxId: 1309]

Probab=97.77  E-value=7.4e-06  Score=65.57  Aligned_cols=26  Identities=19%  Similarity=0.324  Sum_probs=20.6

Q ss_pred             CCCcHHHHHHHHHHCCCeEEEEcCCC
Q 028799          156 LSPGIDELVKKLKANNKNVYLISGGF  181 (203)
Q Consensus       156 l~PG~~elL~~Lk~~G~~vaIVTn~~  181 (203)
                      +.|++.+.|+.|+++|++++++||+.
T Consensus        19 ~i~~a~e~l~~l~~~g~~~~~~TN~s   44 (253)
T d1wvia_          19 RIPAGEDFVKRLQERQLPYILVTNNT   44 (253)
T ss_dssp             ECHHHHHHHHHHHHHTCCEEEEECCC
T ss_pred             cCccHHHHHHHHHHCCCCEEEEeCCC
Confidence            35777778888888899999998853

>d1xpja_ c.108.1.18 (A:) Hypothetical protein VC0232 {Vibrio cholerae [TaxId: 666]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Hypothetical protein VC0232
domain: Hypothetical protein VC0232
species: Vibrio cholerae [TaxId: 666]

Probab=97.62  E-value=6.5e-05  Score=55.00  Aligned_cols=41  Identities=5%  Similarity=-0.110  Sum_probs=34.5

Q ss_pred             CCCCCcHHHHHHHHHHCCCeEEEEcCCC---------------HHHHHHHH-HcCCC
Q 028799          154 PRLSPGIDELVKKLKANNKNVYLISGGF---------------RHMINILN-ILKWD  194 (203)
Q Consensus       154 ~~l~PG~~elL~~Lk~~G~~vaIVTn~~---------------~~~i~~ll-~lGL~  194 (203)
                      ..|.+++.+.+..|++.|+++.|.|+..               ++.+...| ..|++
T Consensus        23 ~~P~~~~Ie~l~~l~~~G~~Iii~TaR~~~~~~~~~~~~~~~~~~~T~~wL~~~gI~   79 (124)
T d1xpja_          23 VLPRLDVIEQLREYHQLGFEIVISTARNMRTYEGNVGKINIHTLPIITEWLDKHQVP   79 (124)
T ss_dssp             CCBCHHHHHHHHHHHHTTCEEEEEECTTTTTTTTCHHHHHHHTHHHHHHHHHHTTCC
T ss_pred             cCcCHHHHHHHHHHHHCCCEEEEEecCCccccCCcHHHHHHHHHHHHHHHHHHcCCC
Confidence            3689999999999999999999999984               34566677 88884

>d1rlma_ c.108.1.10 (A:) Sugar phosphatase SupH (YbiV) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Sugar phosphatase SupH (YbiV)
species: Escherichia coli [TaxId: 562]

Probab=97.60  E-value=1.8e-05  Score=62.83  Aligned_cols=37  Identities=16%  Similarity=0.056  Sum_probs=29.4

Q ss_pred             HHHHHHHHHHCCCeEEEEcCCCHHHHHHHH-HcCCCcc
Q 028799          160 IDELVKKLKANNKNVYLISGGFRHMINILN-ILKWDVL  196 (203)
Q Consensus       160 ~~elL~~Lk~~G~~vaIVTn~~~~~i~~ll-~lGL~~~  196 (203)
                      +.+.|+.|+++|++++++|+.+...+..++ .+++..+
T Consensus        25 ~~~~l~~l~~~gi~~~i~TGR~~~~~~~~~~~l~~~~~   62 (269)
T d1rlma_          25 FMAQYQELKKRGIKFVVASGNQYYQLISFFPELKDEIS   62 (269)
T ss_dssp             HHHHHHHHHHHTCEEEEECSSCHHHHGGGCTTTTTTSE
T ss_pred             HHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHhCcccc
Confidence            455677778889999999999988888877 7777643

>d1q92a_ c.108.1.8 (A:) 5'(3')-deoxyribonucleotidase (dNT-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: 5'(3')-deoxyribonucleotidase (dNT-2)
domain: 5'(3')-deoxyribonucleotidase (dNT-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.50  E-value=0.00021  Score=54.72  Aligned_cols=29  Identities=21%  Similarity=0.334  Sum_probs=25.0

Q ss_pred             CCCCCCcHHHHHHHHHHCC-CeEEEEcCCC
Q 028799          153 PPRLSPGIDELVKKLKANN-KNVYLISGGF  181 (203)
Q Consensus       153 ~~~l~PG~~elL~~Lk~~G-~~vaIVTn~~  181 (203)
                      .++++||+.++++.|++.| +.+.++|+.+
T Consensus        72 ~L~p~~gA~e~l~~L~~~~~~~v~i~t~~~  101 (195)
T d1q92a_          72 ELEPLPGAVEAVKEMASLQNTDVFICTSPI  101 (195)
T ss_dssp             TCCBCTTHHHHHHHHHHSTTEEEEEEECCC
T ss_pred             hCCcccCHHHHHHHHhhccCccceEEcccc
Confidence            3789999999999999865 5788999876

>d2b30a1 c.108.1.10 (A:18-300) PFL1270w orthologue {Plasmodium vivax [TaxId: 5855]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: PFL1270w orthologue
species: Plasmodium vivax [TaxId: 5855]

Probab=97.44  E-value=6.6e-05  Score=59.37  Aligned_cols=37  Identities=11%  Similarity=-0.085  Sum_probs=29.3

Q ss_pred             CCcHHHHHHHHHHCCCeEEEEcCCCHHHHHHHH-HcCC
Q 028799          157 SPGIDELVKKLKANNKNVYLISGGFRHMINILN-ILKW  193 (203)
Q Consensus       157 ~PG~~elL~~Lk~~G~~vaIVTn~~~~~i~~ll-~lGL  193 (203)
                      .|.+.+.|+.|+++|++++++|+.+...+..++ .+++
T Consensus        30 ~~~~~~al~~l~~~Gi~v~i~TGR~~~~~~~~~~~l~~   67 (283)
T d2b30a1          30 PSENIDAIKEAIEKGYMVSICTGRSKVGILSAFGEENL   67 (283)
T ss_dssp             CHHHHHHHHHHHHHTCEEEEECSSCHHHHHHHHCHHHH
T ss_pred             CHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHhCc
Confidence            344566777788889999999999998888877 6654

>d1nf2a_ c.108.1.10 (A:) Hypothetical protein TM0651 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Hypothetical protein TM0651
species: Thermotoga maritima [TaxId: 2336]

Probab=97.43  E-value=0.00015  Score=57.56  Aligned_cols=16  Identities=31%  Similarity=0.438  Sum_probs=14.5

Q ss_pred             CCcEEEEECCCccccc
Q 028799           82 TADAVCFDVDSTVCVD   97 (203)
Q Consensus        82 ~~kaVIFD~DGTLiDs   97 (203)
                      |+|+++||+||||+++
T Consensus         1 m~Kli~~DlDGTL~~~   16 (267)
T d1nf2a_           1 MYRVFVFDLDGTLLND   16 (267)
T ss_dssp             CBCEEEEECCCCCSCT
T ss_pred             CeEEEEEeCCccccCC
Confidence            6899999999999874

>d2amya1 c.108.1.10 (A:4-246) Phosphomannomutase 2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Phosphomannomutase 2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.34  E-value=7.1e-05  Score=57.36  Aligned_cols=30  Identities=17%  Similarity=0.274  Sum_probs=19.0

Q ss_pred             cHHHHHHHHHHCCCeEEEEcCCCHHHHHHHH
Q 028799          159 GIDELVKKLKANNKNVYLISGGFRHMINILN  189 (203)
Q Consensus       159 G~~elL~~Lk~~G~~vaIVTn~~~~~i~~ll  189 (203)
                      ...+.|++|+++|+ ++++|++....+....
T Consensus        24 ~~~~al~~l~~~g~-~~i~Tgr~~~~~~~~~   53 (243)
T d2amya1          24 EMDDFLQKLRQKIK-IGVVGGSDFEKVQEQL   53 (243)
T ss_dssp             HHHHHHHHHTTTSE-EEEECSSCHHHHHHHH
T ss_pred             HHHHHHHHHHcCCC-EEEEcCCChHHhHHHH
Confidence            34555666666664 6788888766655444

>d2obba1 c.108.1.25 (A:1-122) Hypothetical protein BT0820 {Bacteroides thetaiotaomicron [TaxId: 818]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: BT0820-like
domain: Hypothetical protein BT0820
species: Bacteroides thetaiotaomicron [TaxId: 818]

Probab=97.28  E-value=0.00028  Score=51.27  Aligned_cols=40  Identities=15%  Similarity=-0.029  Sum_probs=32.6

Q ss_pred             CCCCcHHHHHHHHHHCCCeEEEEcCCCHHH---HHHHH-HcCCC
Q 028799          155 RLSPGIDELVKKLKANNKNVYLISGGFRHM---INILN-ILKWD  194 (203)
Q Consensus       155 ~l~PG~~elL~~Lk~~G~~vaIVTn~~~~~---i~~ll-~lGL~  194 (203)
                      +|.|++.++|+.|+++|+++.|.|+.....   ....+ ..|+.
T Consensus        21 kPi~~~Ie~l~~L~~~G~~IIi~TaR~~~~~~~t~~wL~~~~i~   64 (122)
T d2obba1          21 EEIPFAVETLKLLQQEKHRLILWSVREGELLDEAIEWCRARGLE   64 (122)
T ss_dssp             CBCTTHHHHHHHHHHTTCEEEECCSCCHHHHHHHHHHHHTTTCC
T ss_pred             cccHHHHHHHHHHHHCCCeEEEEecCCCcchHHHHHHHHHcCCC
Confidence            578999999999999999999999987654   34456 66664

>d1qyia_ c.108.1.13 (A:) Hypothetical protein MW1667 (SA1546) {Staphylococcus aureus [TaxId: 1280]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Hypothetical protein MW1667 (SA1546)
domain: Hypothetical protein MW1667 (SA1546)
species: Staphylococcus aureus [TaxId: 1280]

Probab=96.99  E-value=0.00023  Score=60.51  Aligned_cols=44  Identities=14%  Similarity=-0.025  Sum_probs=40.0

Q ss_pred             CCCCcHHHHHHHHHHCCCeEEEEcCCCHHHHHHHH-HcCCCccce
Q 028799          155 RLSPGIDELVKKLKANNKNVYLISGGFRHMINILN-ILKWDVLKV  198 (203)
Q Consensus       155 ~l~PG~~elL~~Lk~~G~~vaIVTn~~~~~i~~ll-~lGL~~~~~  198 (203)
                      +|+||+.++|+.|+++|++++++||.+...++.++ .+|+..++.
T Consensus       215 ~p~~~v~~~l~~lk~aGi~v~i~Tg~~~~~a~~il~~lgl~~~F~  259 (380)
T d1qyia_         215 RPVDEVKVLLNDLKGAGFELGIATGRPYTETVVPFENLGLLPYFE  259 (380)
T ss_dssp             SCHHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCGGGSC
T ss_pred             cchhhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCcccCC
Confidence            46679999999999999999999999999999999 999987653

>d2b82a1 c.108.1.12 (A:4-212) Class B acid phosphatase, AphA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Class B acid phosphatase, AphA
domain: Class B acid phosphatase, AphA
species: Escherichia coli [TaxId: 562]

Probab=96.84  E-value=0.00033  Score=55.52  Aligned_cols=41  Identities=7%  Similarity=0.107  Sum_probs=32.3

Q ss_pred             CCCCCcHHHHHHHHHHCCCeEEEEcCCCHH----HHHHHH-HcCCC
Q 028799          154 PRLSPGIDELVKKLKANNKNVYLISGGFRH----MINILN-ILKWD  194 (203)
Q Consensus       154 ~~l~PG~~elL~~Lk~~G~~vaIVTn~~~~----~i~~ll-~lGL~  194 (203)
                      ..+.||+.+++++++++|++++.|||....    .++.+. .+|+.
T Consensus        85 A~p~pga~~fl~~~~~~Gv~IfyVTnR~~~~~e~T~~nL~K~lG~p  130 (209)
T d2b82a1          85 SIPKEVARQLIDMHVRRGDAIFFVTGRSPTKTETVSKTLADNFHIP  130 (209)
T ss_dssp             CEECHHHHHHHHHHHHHTCEEEEEECSCCCSSCCHHHHHHHHTTCC
T ss_pred             cCcchhHHHHHHHHHHcCCeEEEEeCCchhhHHHHHHHHHHHcCCC
Confidence            467899999999999999999999997533    233444 48884

>d2b8ea1 c.108.1.7 (A:416-434,A:548-663) Cation-transporting ATPase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Meta-cation ATPase, catalytic domain P
domain: Cation-transporting ATPase
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=96.38  E-value=0.0026  Score=46.59  Aligned_cols=43  Identities=21%  Similarity=0.241  Sum_probs=39.7

Q ss_pred             CCCCcHHHHHHHHHHCCCeEEEEcCCCHHHHHHHH-HcCCCccc
Q 028799          155 RLSPGIDELVKKLKANNKNVYLISGGFRHMINILN-ILKWDVLK  197 (203)
Q Consensus       155 ~l~PG~~elL~~Lk~~G~~vaIVTn~~~~~i~~ll-~lGL~~~~  197 (203)
                      ++.|++.+.++.|++.|+++.++|+-....++.+. .+|++.++
T Consensus        21 ~lr~~a~~~I~~L~~~Gi~v~ilTGD~~~~a~~ia~~lgI~~v~   64 (135)
T d2b8ea1          21 TLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLDLVI   64 (135)
T ss_dssp             CBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCSEEE
T ss_pred             CCCccHHHHHHHHHHcCCEEEEEcCcchhhhhHHHhhhhhhhhc
Confidence            58999999999999999999999999999999999 99997643

>d1s2oa1 c.108.1.10 (A:1-244) Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc 6803 [TaxId: 1148]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Sucrose-phosphatase Slr0953
species: Synechocystis sp. pcc 6803 [TaxId: 1148]

Probab=96.29  E-value=0.0038  Score=48.26  Aligned_cols=28  Identities=14%  Similarity=0.029  Sum_probs=21.9

Q ss_pred             HHCCCeEEEEcCCCHHHHHHHH-HcCCCc
Q 028799          168 KANNKNVYLISGGFRHMINILN-ILKWDV  195 (203)
Q Consensus       168 k~~G~~vaIVTn~~~~~i~~ll-~lGL~~  195 (203)
                      +++|++++++|+.+...+..++ .+++..
T Consensus        31 ~~~g~~v~i~TGR~~~~~~~~~~~~~~~~   59 (244)
T d1s2oa1          31 RRGNFYLAYATGRSYHSARELQKQVGLME   59 (244)
T ss_dssp             TGGGEEEEEECSSCHHHHHHHHHHHTCCC
T ss_pred             HcCCCEEEEECCCCHHHHHHHHHHcCCCC
Confidence            4578888888888888888887 777754

>d2fuea1 c.108.1.10 (A:13-256) Phosphomannomutase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Phosphomannomutase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.01  E-value=0.0041  Score=46.78  Aligned_cols=14  Identities=36%  Similarity=0.468  Sum_probs=11.6

Q ss_pred             EEEEECCCcccccc
Q 028799           85 AVCFDVDSTVCVDE   98 (203)
Q Consensus        85 aVIFD~DGTLiDse   98 (203)
                      .++||+||||++..
T Consensus         3 i~lFDlDGTLl~~~   16 (244)
T d2fuea1           3 LCLFDVDGTLTPAR   16 (244)
T ss_dssp             EEEEESBTTTBSTT
T ss_pred             EEEEccccCccCCC
Confidence            35689999999975

>d2bdea1 c.108.1.23 (A:2-459) Cytosolic IMP-GMP specific 5'-nucleotidase {Legionella pneumophila [TaxId: 446]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: 5' nucleotidase-like
domain: Cytosolic IMP-GMP specific 5'-nucleotidase
species: Legionella pneumophila [TaxId: 446]

Probab=94.91  E-value=0.012  Score=51.34  Aligned_cols=49  Identities=18%  Similarity=0.223  Sum_probs=43.5

Q ss_pred             CCCCcHHHHHHHHHHCCCeEEEEcCCCHHHHHHHH--Hc--------CCCccceEEecC
Q 028799          155 RLSPGIDELVKKLKANNKNVYLISGGFRHMINILN--IL--------KWDVLKVIQITS  203 (203)
Q Consensus       155 ~l~PG~~elL~~Lk~~G~~vaIVTn~~~~~i~~ll--~l--------GL~~~~~i~it~  203 (203)
                      ..-|.+..+|+.||+.|.++.++||++..+++.++  .+        +|..+|+++||.
T Consensus       185 ~k~~~l~~~L~~lr~~GKklFLiTNS~~~y~~~~m~y~~~~~~~~g~dWr~lFDvVIv~  243 (458)
T d2bdea1         185 IREKEVVEGLKHFIRYGKKIFILTNSEYSYSKLLLDYALSPFLDKGEHWQGLFEFVITL  243 (458)
T ss_dssp             ECCHHHHHHHHHHHTTTCEEEEECSSCHHHHHHHHHHHHGGGSCTTCCGGGTEEEEEES
T ss_pred             cCChhHHHHHHHHHHcCCeEEEEecCcHHHHHHHhhhhcccCCCCCCChHHhceEEEeC
Confidence            35788999999999999999999999999998877  56        678899999984

>d2rbka1 c.108.1.10 (A:2-261) Sugar-phosphate phosphatase BT4131 {Bacteroides thetaiotaomicron [TaxId: 818]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Sugar-phosphate phosphatase BT4131
species: Bacteroides thetaiotaomicron [TaxId: 818]

Probab=94.87  E-value=0.0041  Score=48.66  Aligned_cols=15  Identities=40%  Similarity=0.583  Sum_probs=13.2

Q ss_pred             cEEEEECCCcccccc
Q 028799           84 DAVCFDVDSTVCVDE   98 (203)
Q Consensus        84 kaVIFD~DGTLiDse   98 (203)
                      |+|+|||||||++.+
T Consensus         2 k~if~DlDGTL~~~~   16 (260)
T d2rbka1           2 KALFFDIDGTLVSFE   16 (260)
T ss_dssp             CEEEECSBTTTBCTT
T ss_pred             eEEEEECCCCCcCCC
Confidence            789999999999753

>d1wpga2 c.108.1.7 (A:344-360,A:600-750) Calcium ATPase, catalytic domain P {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Meta-cation ATPase, catalytic domain P
domain: Calcium ATPase, catalytic domain P
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=94.84  E-value=0.022  Score=42.75  Aligned_cols=40  Identities=8%  Similarity=-0.006  Sum_probs=37.9

Q ss_pred             CCCCcHHHHHHHHHHCCCeEEEEcCCCHHHHHHHH-HcCCC
Q 028799          155 RLSPGIDELVKKLKANNKNVYLISGGFRHMINILN-ILKWD  194 (203)
Q Consensus       155 ~l~PG~~elL~~Lk~~G~~vaIVTn~~~~~i~~ll-~lGL~  194 (203)
                      ++.|++.+.++.|++.|+++.++|+-....+..+. .+|+.
T Consensus        20 p~R~~~~~~I~~l~~~GI~v~miTGD~~~tA~~ia~~~Gi~   60 (168)
T d1wpga2          20 PPRKEVMGSIQLCRDAGIRVIMITGDNKGTAIAICRRIGIF   60 (168)
T ss_dssp             CBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTSS
T ss_pred             CCchhHHHHHHHHHHCcCEEEEECCCCHHHHHHHHHHcCCC
Confidence            68999999999999999999999999999999999 99984

>d1y8aa1 c.108.1.24 (A:1-308) Hypothetical protein AF1437 {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: AF1437-like
domain: Hypothetical protein AF1437
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=94.71  E-value=0.073  Score=42.94  Aligned_cols=107  Identities=10%  Similarity=0.095  Sum_probs=67.1

Q ss_pred             EEEECCCcccccchHHHHHHHc-CCCccH------HHHHH-HHhCCCCCHHHHHHHHHhcc--CC-CHHHHHHHHHhCCC
Q 028799           86 VCFDVDSTVCVDEGIDELAEFC-GAGKAV------AEWTA-RAMGGSVPFEEALAARLSLF--KP-SLSQVQDFLEKRPP  154 (203)
Q Consensus        86 VIFD~DGTLiDse~~~~la~~~-G~~~~~------~~~~~-~~~gG~~~~~e~l~~~~~~~--~~-~~e~l~~~~~~~~~  154 (203)
                      .++|+.|-|.-.+.-.+++.++ .-+.-.      +++.. .....-+.--..++-.+.++  .| +.+.+.++-+.. +
T Consensus         2 fvtDcEGPlslnDnA~E~~a~~~~~grfF~~lS~yDD~L~~E~~reGY~aG~TLKLIvPFl~a~Gvt~edL~~fSE~~-~   80 (308)
T d1y8aa1           2 FFTDWEGPWILTDFALELCMAVFNNARFFSNLSEYDDYLAYEVRREGYEAGYTLKLLTPFLAAAGVKNRDVERIAELS-A   80 (308)
T ss_dssp             EEECSBTTTBCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHTTCCTTCCTTTHHHHHHHHHHHTTCCHHHHHHHHHHH-C
T ss_pred             ceeccCCCCcccccHHHHHHhcCCCcchhhhhhhhhhHHHHHhhccCCCCccchhhHHHHHHHhCCCHHHHHHHhhhc-e
Confidence            6889999998776655555443 111100      11111 00000011111222222222  24 567777777753 7


Q ss_pred             CCCCcHHHHHHHHHHCCCeEEEEcCCCHHHHHHHH-HcCCC
Q 028799          155 RLSPGIDELVKKLKANNKNVYLISGGFRHMINILN-ILKWD  194 (203)
Q Consensus       155 ~l~PG~~elL~~Lk~~G~~vaIVTn~~~~~i~~ll-~lGL~  194 (203)
                      .+.||+.++++.+.+. .+.+|||.+.++.++++. +.|+.
T Consensus        81 ~lvpgA~~~lk~l~~~-m~~yIvSTSY~qyi~al~~~~gfp  120 (308)
T d1y8aa1          81 KFVPDAEKAMATLQER-WTPVVISTSYTQYLRRTASMIGVR  120 (308)
T ss_dssp             CBCTTHHHHHHHHHTT-CEEEEEEEEEHHHHHHHHHHTTCC
T ss_pred             eecCCHHHHHHHHHhh-CCcEEEeccHHHHHHHHHhhcCCC
Confidence            9999999999999865 999999999999999999 99996

>d1u02a_ c.108.1.15 (A:) Trehalose-6-phosphate phosphatase related protein {Archaeon Thermoplasma acidophilum [TaxId: 2303]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Trehalose-phosphatase
domain: Trehalose-6-phosphate phosphatase related protein
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

Probab=93.71  E-value=0.011  Score=44.11  Aligned_cols=12  Identities=25%  Similarity=0.398  Sum_probs=10.9

Q ss_pred             EEEEECCCcccc
Q 028799           85 AVCFDVDSTVCV   96 (203)
Q Consensus        85 aVIFD~DGTLiD   96 (203)
                      .++||+||||++
T Consensus         2 Li~~DlDGTL~~   13 (229)
T d1u02a_           2 LIFLDYDGTLVP   13 (229)
T ss_dssp             EEEEECBTTTBC
T ss_pred             EEEEEecCCCCC
Confidence            689999999996

>d1k1ea_ c.108.1.5 (A:) Probable phosphatase YrbI {Haemophilus influenzae, HI1679 [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Probable phosphatase YrbI
domain: Probable phosphatase YrbI
species: Haemophilus influenzae, HI1679 [TaxId: 727]

Probab=93.28  E-value=0.016  Score=43.83  Aligned_cols=17  Identities=24%  Similarity=0.200  Sum_probs=15.5

Q ss_pred             cCCcEEEEECCCccccc
Q 028799           81 RTADAVCFDVDSTVCVD   97 (203)
Q Consensus        81 ~~~kaVIFD~DGTLiDs   97 (203)
                      +++++++||+||||+|.
T Consensus         3 ~~ik~~i~DvDGVlTDG   19 (177)
T d1k1ea_           3 ENIKFVITDVDGVLTDG   19 (177)
T ss_dssp             GGCCEEEEECTTTTSCS
T ss_pred             ccCeEEEEccCCcccCC
Confidence            57899999999999996

>d1qyia_ c.108.1.13 (A:) Hypothetical protein MW1667 (SA1546) {Staphylococcus aureus [TaxId: 1280]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Hypothetical protein MW1667 (SA1546)
domain: Hypothetical protein MW1667 (SA1546)
species: Staphylococcus aureus [TaxId: 1280]

Probab=90.24  E-value=0.067  Score=44.64  Aligned_cols=18  Identities=28%  Similarity=0.427  Sum_probs=15.8

Q ss_pred             CcEEEEECCCcccccchH
Q 028799           83 ADAVCFDVDSTVCVDEGI  100 (203)
Q Consensus        83 ~kaVIFD~DGTLiDse~~  100 (203)
                      ++.|+||+||+|++.+..
T Consensus         1 ~~~i~fd~dGVll~~~~~   18 (380)
T d1qyia_           1 MKKILFDVDGVFLSEERC   18 (380)
T ss_dssp             CCEEEECSBTTTBCSHHH
T ss_pred             CceEEEeCCcEEEcceee
Confidence            578999999999998863

>d1ta0a_ c.108.1.16 (A:) Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1, NRAMP1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: NLI interacting factor-like phosphatase
domain: Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1, NRAMP1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=86.76  E-value=0.47  Score=35.22  Aligned_cols=42  Identities=12%  Similarity=0.146  Sum_probs=36.5

Q ss_pred             CCCCCcHHHHHHHHHHCCCeEEEEcCCCHHHHHHHH-HcCCCcc
Q 028799          154 PRLSPGIDELVKKLKANNKNVYLISGGFRHMINILN-ILKWDVL  196 (203)
Q Consensus       154 ~~l~PG~~elL~~Lk~~G~~vaIVTn~~~~~i~~ll-~lGL~~~  196 (203)
                      +.+.||+.++|+++.+. +.++|-|+|.+..++.++ .++-...
T Consensus        54 v~~RP~l~eFL~~l~~~-yei~I~Ta~~~~YA~~il~~ldp~~~   96 (181)
T d1ta0a_          54 VLKRPHVDEFLQRMGEL-FECVLFTASLAKYADPVADLLDKWGA   96 (181)
T ss_dssp             EEECTTHHHHHHHHHHH-SEEEEECSSCHHHHHHHHHHHCSSCC
T ss_pred             EecCCCHHHHHHHHHhc-eEEEEEcCCcHHHHHHHHHHhccCCc
Confidence            46899999999999865 999999999999999999 7765443

>d1yj5a1 c.108.1.9 (A:144-338) 5' polynucleotide kinase-3' phosphatase, middle domain {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: phosphatase domain of polynucleotide kinase
domain: 5' polynucleotide kinase-3' phosphatase, middle domain
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=85.42  E-value=0.2  Score=38.26  Aligned_cols=25  Identities=20%  Similarity=0.364  Sum_probs=23.5

Q ss_pred             CCCcHHHHHHHHHHCCCeEEEEcCC
Q 028799          156 LSPGIDELVKKLKANNKNVYLISGG  180 (203)
Q Consensus       156 l~PG~~elL~~Lk~~G~~vaIVTn~  180 (203)
                      ++|++.+.|+.|+++|+.++|+||-
T Consensus        51 l~~~v~~~i~~L~~~gy~iiIvTNQ   75 (195)
T d1yj5a1          51 LYPEIPKKLQELAAEGYKLVIFTNQ   75 (195)
T ss_dssp             SCTTHHHHHHHHHHHTCEEEEEEEC
T ss_pred             ccCCHHHHHHHHHhCCcEEEEecCc
Confidence            5799999999999999999999994

>d1yj5a1 c.108.1.9 (A:144-338) 5' polynucleotide kinase-3' phosphatase, middle domain {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: phosphatase domain of polynucleotide kinase
domain: 5' polynucleotide kinase-3' phosphatase, middle domain
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=83.20  E-value=0.19  Score=38.34  Aligned_cols=16  Identities=25%  Similarity=0.491  Sum_probs=13.4

Q ss_pred             CCcEEEEECCCccccc
Q 028799           82 TADAVCFDVDSTVCVD   97 (203)
Q Consensus        82 ~~kaVIFD~DGTLiDs   97 (203)
                      ..|+++||.||||+..
T Consensus        20 ~~Kia~fDrDGtLik~   35 (195)
T d1yj5a1          20 QGKVAAFDLDGTLITT   35 (195)
T ss_dssp             CSCEEEECSBTTTEEC
T ss_pred             cCcEEEEECCCceEee
Confidence            4589999999999864