Citrus Sinensis ID: 028815

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200---
Protein Sequence
MVALYAAVMDTITTYTGLSPAAFFTILALMCVVYKTVCSMFVDPEPPEDLKNKLISSSAAASAATAANFSNQTMIPETVQLGDVTEHELRAYDGSDPNKPLLMAIKGQIYDVSRSRMFYGPGGPYAMFAGRDASRALALMSFDPQDLTGNIEGLSDSELEVLQDWEYKFMEKYVKVGQIVSEQTSKPTKNGDKVPENQNHDGA
Secondary Structure (PSIPRED)
cHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHHccccccccccccccccccHHHHHHcccccccccEEEEEccEEEEEEcccccccccccccccccccHHHHHHHccccccccccccccccHHHHHHHHHHHHHHHccccccEEEEccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
cHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccHHHHHHcccccccccEEEEEEEEEEEEccccEcccccccHHHHcccHHHHHHHHccccccccccccccccHHHHHHHHHHHHHHHHHccEEEEEEccccccccccccccHHccccccc
Coil and Loop (DISEMBL)
MVALYAAVMDTIttytglspaAFFTILALMCVVYKTVCsmfvdpeppedlknklisSSAAASAATaanfsnqtmipetvqlgdvtehelraydgsdpnkplLMAIKGQIYdvsrsrmfygpggpyamfaGRDASRALAlmsfdpqdltgnieglsdsELEVLQDWEYKFMEKYVKVGQIVseqtskptkngdkvpenqnhdga
Flexible Loop (DISEMBL)
MVALYAAVMDTITTYTGLSPAAFFTILALMCVVYKTVCSMFVDPEPPEDLKNKLISSSAAASAATAANFSNQTMIPETVQLGDVTEHELRAydgsdpnkplLMAIKGQIYDVSRSRMFYGPGGPYAMFAGRDASRALALMSFDPQDLTGNIEGLSDSELEVLQDWEYKFMEKYVKVGQIVseqtskptkngdkvpenqnhdga
Low Complexity Region (SEG)
MVALYAAVMDTITTYTGLSPAAFFTILALMCVVYKTVCSMFVDPEPPEDLKNKLIsssaaasaataaNFSNQTMIPETVQLGDVTEHELRAYDGSDPNKPLLMAIKGQIYDVSRSRMFYGPGGPYAMFAGRDASRALALMSFDPQDLTGNIEGLSDSELEVLQDWEYKFMEKYVKVGQIVSEQTSKPTKNGDKVPENQNHDGA
Disordered region (IsUnstruct)
**ALYAAVMDTITTYTGLSPAAFFTILALMCVVYKTVCSMFV*********************************************************PLLMAIKGQIYDVSRSRMFYGPGGPYAMFAGRDASRALALMSFDPQDLTGNIEGLSDSELEVLQDWEYKFMEKYVKVGQIV***********************
Disordered Region (DISOPRED)
**ALYAAVMDTITTYTGLSPAAFFTILALMCVVYKTVCSMFVDPEPPEDLKNKLISSS********************VQLGDVTEHELRAYDGSDPNKPLLMAIKGQIYDVSRSRMFYGPGGPYAMFAGRDASRALALMSFDPQDLTGNIEGLSDSELEVLQDWEYKFMEKYVKVGQIVS**********************
Disordered Region (DISEMBL)
MVALYAAVMDTITTYTGLSPAAFFTILALMCVVYKTVCSMFVDPEPPEDLKNKLIS*********AANFSNQTMIPETVQLGDVTEHELRAYDGSDPNKPLLMAIKGQIYDVSRSRMFYGPGGPYAMFAGRDASRALALMSFDPQDLTGNIEGLSDSELEVLQDWEYKFMEKYVKVGQIVSEQ********************
Disordered Region (DISPRO)
MVALYAAVMDTITTYTGLSPAAFFTILALMCVVYKTVCSMFVDPEPPEDLKNK*********************IPETVQLGDVTEHELRAYDGSDPNKPLLMAIKGQIYDVSRSRMFYGPGGPYAMFAGRDASRALALMSFDPQDLTGNIEGLSDSELEVLQDWEYKFMEKYVKVGQIVSEQ********************
Transmembrane Helix (TMHMM)
iiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
ooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MVALYAAVMDTITTYTGLSPAAFFTILALMCVVYKTVCSMFVDPEPPEDLKNKLISSSAAASAATAANFSNQTMIPETVQLGDVTEHELRAYDGSDPNKPLLMAIKGQIYDVSRSRMFYGPGGPYAMFAGRDASRALALMSFDPQDLTGNIEGLSDSELEVLQDWEYKFMEKYVKVGQIVSEQTSKPTKNGDKVPENQNHDGA
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	203	2.2.26 [Sep-21-2011]
Q9M2Z4	233	Membrane steroid-binding	yes	no	0.788	0.686	0.606	5e-55
Q9XFM6	220	Membrane steroid-binding	no	no	0.871	0.804	0.505	5e-49
Q9SK39	100	Probable steroid-binding	no	no	0.487	0.99	0.484	9e-24
P70580	195	Membrane-associated proge	yes	no	0.660	0.687	0.385	3e-20
Q5RED0	195	Membrane-associated proge	yes	no	0.566	0.589	0.421	1e-19
O00264	195	Membrane-associated proge	yes	no	0.566	0.589	0.421	1e-19
O55022	195	Membrane-associated proge	yes	no	0.561	0.584	0.425	1e-19
Q95250	194	Membrane-associated proge	yes	no	0.566	0.592	0.413	3e-19
Q5ZKN2	192	Membrane-associated proge	yes	no	0.482	0.510	0.461	4e-19
Q17QC0	194	Membrane-associated proge	yes	no	0.532	0.556	0.452	4e-19

>sp|Q9M2Z4|MSBP2_ARATH Membrane steroid-binding protein 2 OS=Arabidopsis thaliana GN=MSBP2 PE=1 SV=1

 Score =  213 bits (543), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 108/178 (60%), Positives = 125/178 (70%), Gaps = 18/178 (10%)

Query: 4   LYAAVMDTITTYTGLSPAAFFTILALMCVVYKTVCSMFVDPE--PPEDLKNKLISSSAAA 61
           ++  + +TIT YTGLSPAAFFT+LAL   VY+ V   FV PE   P  L+ +  S     
Sbjct: 5   IWETLKETITAYTGLSPAAFFTVLALAFAVYQVVSGFFVSPEVHRPRSLEVQPQSEP--- 61

Query: 62  SAATAANFSNQTMIPETVQLGDVTEHELRAYDGSDPNKPLLMAIKGQIYDVSRSRMFYGP 121
                        +P  VQLG++TE EL+ YDGSD  KPLLMAIKGQIYDVS+SRMFYGP
Sbjct: 62  -------------LPPPVQLGEITEEELKLYDGSDSKKPLLMAIKGQIYDVSQSRMFYGP 108

Query: 122 GGPYAMFAGRDASRALALMSFDPQDLTGNIEGLSDSELEVLQDWEYKFMEKYVKVGQI 179
           GGPYA+FAG+DASRALA MSF+ QDLTG+I GL   ELE LQDWEYKFM KYVKVG I
Sbjct: 109 GGPYALFAGKDASRALAKMSFEDQDLTGDISGLGAFELEALQDWEYKFMSKYVKVGTI 166

Arabidopsis thaliana (taxid: 3702)

>sp|Q9XFM6|MSBP1_ARATH Membrane steroid-binding protein 1 OS=Arabidopsis thaliana GN=MSBP1 PE=1 SV=2

 Score =  194 bits (492), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 98/194 (50%), Positives = 126/194 (64%), Gaps = 17/194 (8%)

Query: 4   LYAAVMDTITTYTGLSPAAFFTILALMCVVYKTVCSMFVDPEPPEDLKNKLISSSAAASA 63
           L+  + + I  YTGLSP  FFT LAL   +Y+ +   F  P   +D+     + S A   
Sbjct: 5   LWQTLKEAIHAYTGLSPVVFFTALALAFAIYQVISGWFASPF--DDVNRHQRARSLAQE- 61

Query: 64  ATAANFSNQTMIPETVQLGDVTEHELRAYDGSDPNKPLLMAIKGQIYDVSRSRMFYGPGG 123
                   +  IP+ VQ+G++TE EL+ YDGSDP KPLLMAIK QIYDV++SRMFYGPGG
Sbjct: 62  -------EEPPIPQPVQVGEITEEELKQYDGSDPQKPLLMAIKHQIYDVTQSRMFYGPGG 114

Query: 124 PYAMFAGRDASRALALMSFDPQDLTGNIEGLSDSELEVLQDWEYKFMEKYVKVGQIV--- 180
           PYA+FAG+DASRALA MSF+ +DLT ++ GL   EL+ LQDWEYKFM KY KVG +    
Sbjct: 115 PYALFAGKDASRALAKMSFEEKDLTWDVSGLGPFELDALQDWEYKFMSKYAKVGTVKVAG 174

Query: 181 ----SEQTSKPTKN 190
               +   S+PT+N
Sbjct: 175 SEPETASVSEPTEN 188

MSBP1 can bind to multiple steroid compounds with different affinities. Negatively regulates cell elongation and brassinosteroid signaling. May act as a coreceptor with BAK1 and enhances its endocytosis.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9SK39|SBP3_ARATH Probable steroid-binding protein 3 OS=Arabidopsis thaliana GN=MP3 PE=1 SV=1

 Score =  110 bits (274), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 48/99 (48%), Positives = 73/99 (73%)

Query: 83  DVTEHELRAYDGSDPNKPLLMAIKGQIYDVSRSRMFYGPGGPYAMFAGRDASRALALMSF 142
           + T  +L  Y+G+D +KP+ +AIKG+++DV+  + FYG GG Y+MFAG+DASRAL  MS 
Sbjct: 2   EFTAEQLSQYNGTDESKPIYVAIKGRVFDVTTGKSFYGSGGDYSMFAGKDASRALGKMSK 61

Query: 143 DPQDLTGNIEGLSDSELEVLQDWEYKFMEKYVKVGQIVS 181
           + +D++ ++EGL++ E+  L DWE KF  KY  VG++VS
Sbjct: 62  NEEDVSPSLEGLTEKEINTLNDWETKFEAKYPVVGRVVS 100

Arabidopsis thaliana (taxid: 3702)

>sp|P70580|PGRC1_RAT Membrane-associated progesterone receptor component 1 OS=Rattus norvegicus GN=Pgrmc1 PE=1 SV=3

 Score = 98.6 bits (244), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 54/140 (38%), Positives = 80/140 (57%), Gaps = 6/140 (4%)

Query: 63  AATAANFSNQTMIPETVQLGDVTEHELRAYDG-SDPNKPLLMAIKGQIYDVSRSRMFYGP 121
            A+  N  ++      ++  D T  ELR YDG  DP   +LMAI G+++DV++ R FYGP
Sbjct: 52  GASGDNDDDEPPPLPRLKPRDFTPAELRRYDGVQDPR--ILMAINGKVFDVTKGRKFYGP 109

Query: 122 GGPYAMFAGRDASRALALMSFDPQDLTGNIEGLSD---SELEVLQDWEYKFMEKYVKVGQ 178
            GPY +FAGRDASR LA    D + L    + LSD   ++ E L DW+ +F  KY  VG+
Sbjct: 110 EGPYGVFAGRDASRGLATFCLDKEALKDEYDDLSDLTPAQQETLNDWDSQFTFKYHHVGK 169

Query: 179 IVSEQTSKPTKNGDKVPENQ 198
           ++ E       + D+ P+++
Sbjct: 170 LLKEGEEPTVYSDDEEPKDE 189

Receptor for progesterone (By similarity). May be implicated in 2,3,7,8-tetrachlorodibenzo-p-dioxin (TCDD) immunotoxicity.

Rattus norvegicus (taxid: 10116)

>sp|Q5RED0|PGRC1_PONAB Membrane-associated progesterone receptor component 1 OS=Pongo abelii GN=PGRMC1 PE=2 SV=3

 Score = 96.7 bits (239), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 51/121 (42%), Positives = 74/121 (61%), Gaps = 6/121 (4%)

Query: 83  DVTEHELRAYDG-SDPNKPLLMAIKGQIYDVSRSRMFYGPGGPYAMFAGRDASRALALMS 141
           D T  ELR +DG  DP   +LMAI G+++DV++ R FYGP GPY +FAGRDASR LA   
Sbjct: 72  DFTPAELRRFDGVQDPR--ILMAINGKVFDVTKGRKFYGPEGPYGVFAGRDASRGLATFC 129

Query: 142 FDPQDLTGNIEGLSD---SELEVLQDWEYKFMEKYVKVGQIVSEQTSKPTKNGDKVPENQ 198
            D + L    + LSD   ++ E L DWE +F  KY  VG+++ E       + ++ P+++
Sbjct: 130 LDKEALKDEYDDLSDLTAAQQETLSDWESQFTFKYHHVGKLLKEGEEPTVYSDEEEPKDE 189

Query: 199 N 199
           +
Sbjct: 190 S 190

Receptor for progesterone.

Pongo abelii (taxid: 9601)

>sp|O00264|PGRC1_HUMAN Membrane-associated progesterone receptor component 1 OS=Homo sapiens GN=PGRMC1 PE=1 SV=3

 Score = 96.3 bits (238), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 51/121 (42%), Positives = 74/121 (61%), Gaps = 6/121 (4%)

Query: 83  DVTEHELRAYDG-SDPNKPLLMAIKGQIYDVSRSRMFYGPGGPYAMFAGRDASRALALMS 141
           D T  ELR +DG  DP   +LMAI G+++DV++ R FYGP GPY +FAGRDASR LA   
Sbjct: 72  DFTPAELRRFDGVQDPR--ILMAINGKVFDVTKGRKFYGPEGPYGVFAGRDASRGLATFC 129

Query: 142 FDPQDLTGNIEGLSD---SELEVLQDWEYKFMEKYVKVGQIVSEQTSKPTKNGDKVPENQ 198
            D + L    + LSD   ++ E L DWE +F  KY  VG+++ E       + ++ P+++
Sbjct: 130 LDKEALKDEYDDLSDLTAAQQETLSDWESQFTFKYHHVGKLLKEGEEPTVYSDEEEPKDE 189

Query: 199 N 199
           +
Sbjct: 190 S 190

Receptor for progesterone.

Homo sapiens (taxid: 9606)

>sp|O55022|PGRC1_MOUSE Membrane-associated progesterone receptor component 1 OS=Mus musculus GN=Pgrmc1 PE=1 SV=4

 Score = 96.3 bits (238), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 51/120 (42%), Positives = 73/120 (60%), Gaps = 6/120 (5%)

Query: 83  DVTEHELRAYDG-SDPNKPLLMAIKGQIYDVSRSRMFYGPGGPYAMFAGRDASRALALMS 141
           D T  ELR +DG  DP   +LMAI G+++DV++ R FYGP GPY +FAGRDASR LA   
Sbjct: 72  DFTPAELRRFDGVQDPR--ILMAINGKVFDVTKGRKFYGPEGPYGVFAGRDASRGLATFC 129

Query: 142 FDPQDLTGNIEGLSD---SELEVLQDWEYKFMEKYVKVGQIVSEQTSKPTKNGDKVPENQ 198
            D + L    + LSD   ++ E L DW+ +F  KY  VG+++ E       + D+ P+++
Sbjct: 130 LDKEALKDEYDDLSDLTPAQQETLSDWDSQFTFKYHHVGKLLKEGEEPTVYSDDEEPKDE 189

Receptor for progesterone.

Mus musculus (taxid: 10090)

>sp|Q95250|PGRC1_PIG Membrane-associated progesterone receptor component 1 OS=Sus scrofa GN=PGRMC1 PE=1 SV=3

 Score = 95.1 bits (235), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 50/121 (41%), Positives = 74/121 (61%), Gaps = 6/121 (4%)

Query: 83  DVTEHELRAYDG-SDPNKPLLMAIKGQIYDVSRSRMFYGPGGPYAMFAGRDASRALALMS 141
           D T  ELR +DG  DP   +LMAI G+++DV++ R FYGP GPY +FAGRDASR LA   
Sbjct: 71  DFTPAELRRFDGVQDPR--ILMAINGKVFDVTKGRKFYGPEGPYGVFAGRDASRGLATFC 128

Query: 142 FDPQDLTGNIEGLSD---SELEVLQDWEYKFMEKYVKVGQIVSEQTSKPTKNGDKVPENQ 198
            D + L    + LSD   ++ E L DW+ +F  KY  VG+++ E       + ++ P+++
Sbjct: 129 LDKEALKDEYDDLSDLTPAQQETLNDWDSQFTFKYHHVGKLLKEGEEPTVYSDEEEPKDE 188

Query: 199 N 199
           +
Sbjct: 189 S 189

Receptor for progesterone.

Sus scrofa (taxid: 9823)

>sp|Q5ZKN2|PGRC1_CHICK Membrane-associated progesterone receptor component 1 OS=Gallus gallus GN=PGRMC1 PE=2 SV=3

 Score = 94.7 bits (234), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 48/104 (46%), Positives = 68/104 (65%), Gaps = 6/104 (5%)

Query: 83  DVTEHELRAYDG-SDPNKPLLMAIKGQIYDVSRSRMFYGPGGPYAMFAGRDASRALALMS 141
           D T  +LR YDG  DP   +LMA+ G+++DV+R+  FYGP GPY +FAGRDASR LA   
Sbjct: 70  DFTLEQLRPYDGVRDPR--ILMAVNGKVFDVTRASKFYGPDGPYGIFAGRDASRGLATFC 127

Query: 142 FDPQDLTGNIEGLSD---SELEVLQDWEYKFMEKYVKVGQIVSE 182
            D + L  + + LSD   ++ E L+DWE +F  KY  VG+++ +
Sbjct: 128 LDKEALRDDYDDLSDLNATQQETLRDWESQFTFKYHHVGKLLKD 171

Receptor for progesterone.

Gallus gallus (taxid: 9031)

>sp|Q17QC0|PGRC1_BOVIN Membrane-associated progesterone receptor component 1 OS=Bos taurus GN=PGRMC1 PE=2 SV=3

 Score = 94.4 bits (233), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 52/115 (45%), Positives = 71/115 (61%), Gaps = 7/115 (6%)

Query: 83  DVTEHELRAYDG-SDPNKPLLMAIKGQIYDVSRSRMFYGPGGPYAMFAGRDASRALALMS 141
           D T  ELR +DG  DP   +LMAI G+++DV++ R FYGP GPY +FAGRDASR LA   
Sbjct: 71  DFTPAELRRFDGVQDPR--ILMAINGKVFDVTKGRKFYGPEGPYGVFAGRDASRGLATFC 128

Query: 142 FDPQDLTGNIEGLSD---SELEVLQDWEYKFMEKYVKVGQIVSEQTSKPTKNGDK 193
            D + L    + LSD   ++ E L DW+ +F  KY  VG+++ +   +PT   DK
Sbjct: 129 LDKEALKDEYDDLSDLTPAQQETLSDWDSQFTFKYHHVGKLLKD-GEEPTVYSDK 182

Receptor for progesterone.

Bos taurus (taxid: 9913)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	203
255565313	197	steroid binding protein, putative [Ricin	0.926	0.954	0.710	3e-73
224134426	179	predicted protein [Populus trichocarpa]	0.881	1.0	0.673	2e-66
356571342	200	PREDICTED: membrane steroid-binding prot	0.940	0.955	0.562	2e-58
449437656	206	PREDICTED: membrane steroid-binding prot	0.931	0.917	0.539	9e-56
307136132	206	steroid binding protein [Cucumis melo su	0.911	0.898	0.545	1e-54
297816096	232	membrane-associated progesterone binding	0.802	0.702	0.602	2e-53
15229044	233	membrane steroid-binding protein 2 [Arab	0.788	0.686	0.606	3e-53
224284631	262	unknown [Picea sitchensis] gi|224284943|	0.793	0.614	0.578	3e-53
4960154	253	putative progesterone-binding protein ho	0.788	0.632	0.606	4e-53
116784123	262	unknown [Picea sitchensis]	0.793	0.614	0.578	4e-53

>gi|255565313|ref|XP_002523648.1| steroid binding protein, putative [Ricinus communis] gi|223537100|gb|EEF38734.1| steroid binding protein, putative [Ricinus communis]

 Score =  280 bits (715), Expect = 3e-73,   Method: Compositional matrix adjust.
 Identities = 145/204 (71%), Positives = 165/204 (80%), Gaps = 16/204 (7%)

Query: 2   VALYAAVMDTITTYTGLSPAAFFTILALMCVVYKTVCSMFVDPEPPEDLKNKLISSSAAA 61
           +A Y+ VMD+I  YTGLSPAAFFTI ALM VVYK VCSMFVDPE   +L N  +S++   
Sbjct: 1   MATYSIVMDSIEGYTGLSPAAFFTIAALMVVVYKMVCSMFVDPE---ELHNHKLSNN--- 54

Query: 62  SAATAANFSNQTM--IPETVQLGD-VTEHELRAYDGSDPNKPLLMAIKGQIYDVSRSRMF 118
                 + ++QT   I E VQLGD VTE ELRAYDGSDP+KPLLMAIKGQIYDVS SRMF
Sbjct: 55  ------HINDQTTPRILEPVQLGDYVTEQELRAYDGSDPSKPLLMAIKGQIYDVSSSRMF 108

Query: 119 YGPGGPYAMFAGRDASRALALMSFDPQDLTGNIEGLSDSELEVLQDWEYKFMEKYVKVGQ 178
           YGPGGPYA FAGRDASRALAL+SFDP+DLTGN+EGLS+SELEVLQDWEYKFMEKYVKVGQ
Sbjct: 109 YGPGGPYAKFAGRDASRALALLSFDPKDLTGNLEGLSESELEVLQDWEYKFMEKYVKVGQ 168

Query: 179 IVSEQT-SKPTKNGDKVPENQNHD 201
           +VSE T ++ T  G+KV ENQ H+
Sbjct: 169 LVSEHTRTEETDAGEKVEENQKHE 192

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224134426|ref|XP_002321821.1| predicted protein [Populus trichocarpa] gi|222868817|gb|EEF05948.1| predicted protein [Populus trichocarpa]

 Score =  257 bits (657), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 130/193 (67%), Positives = 142/193 (73%), Gaps = 14/193 (7%)

Query: 9   MDTITTYTGLSPAAFFTILALMCVVYKTVCSMFVDPEPPEDLKNKLISSSAAASAATAAN 68
           M+T+  YTGLSPAAFFTI A+M VVYK VCSMFVDPE             A         
Sbjct: 1   METMEAYTGLSPAAFFTIAAVMVVVYKIVCSMFVDPE-----------DIATNQPPPPQP 49

Query: 69  FSNQTMIPETVQLGDVTEHELRAYDGSDPNKPLLMAIKGQIYDVSRSRMFYGPGGPYAMF 128
                 I E VQLGDVTE ELRAYDGSDPNKPLLMAIKG+IYDVSRSRMFYGPGGPYA F
Sbjct: 50  QPQPPTIQEPVQLGDVTEEELRAYDGSDPNKPLLMAIKGKIYDVSRSRMFYGPGGPYAFF 109

Query: 129 AGRDASRALALMSFDPQDLTGNIEGLSDSELEVLQDWEYKFMEKYVKVGQIVSEQTSKPT 188
           AGR+ASRALALMSFDP+DL GN+EGLS+ ELEVLQDWEYKFMEKYVKVGQ+V    +   
Sbjct: 110 AGREASRALALMSFDPRDLNGNLEGLSEPELEVLQDWEYKFMEKYVKVGQLVG---TDQA 166

Query: 189 KNGDKVPENQNHD 201
            NG  V E++ HD
Sbjct: 167 VNGGDVQESEKHD 179

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356571342|ref|XP_003553837.1| PREDICTED: membrane steroid-binding protein 2-like [Glycine max]

 Score =  230 bits (587), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 112/199 (56%), Positives = 146/199 (73%), Gaps = 8/199 (4%)

Query: 2   VALYAAVMDTITTYTGLSPAAFFTILALMCVVYKTVCSMFVDPEPPEDLKNKLISSSAAA 61
           + LY +VM+ I+ YTGLSPAAFFTILA+M VVY+TV  MFV PE   D     + S+ A 
Sbjct: 1   MGLYTSVMEEISFYTGLSPAAFFTILAMMVVVYRTVSGMFVSPE---DYNKPPVVSARAN 57

Query: 62  SAATAANFSNQTMIPETVQLGDVTEHELRAYDGSDPNKPLLMAIKGQIYDVSRSRMFYGP 121
           S    +         E VQLG++T+ ELRAYDGSDP+KPLLMAIKGQIYDVS  R FYGP
Sbjct: 58  SRLDESEPPR-----EPVQLGEITDRELRAYDGSDPSKPLLMAIKGQIYDVSNGRNFYGP 112

Query: 122 GGPYAMFAGRDASRALALMSFDPQDLTGNIEGLSDSELEVLQDWEYKFMEKYVKVGQIVS 181
           GGPYAMFAG++ SRALAL+SF P D+ GN+EGL + EL +L+DWE+KF+EKY KVGQ+++
Sbjct: 113 GGPYAMFAGKECSRALALLSFKPDDINGNLEGLGEEELTILEDWEFKFIEKYPKVGQLIA 172

Query: 182 EQTSKPTKNGDKVPENQNH 200
           EQ ++  +  ++  +N ++
Sbjct: 173 EQRTRQNEFKEQTQDNLDN 191

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449437656|ref|XP_004136607.1| PREDICTED: membrane steroid-binding protein 2-like [Cucumis sativus] gi|449511478|ref|XP_004163966.1| PREDICTED: membrane steroid-binding protein 2-like [Cucumis sativus]

 Score =  221 bits (564), Expect = 9e-56,   Method: Compositional matrix adjust.
 Identities = 116/215 (53%), Positives = 146/215 (67%), Gaps = 26/215 (12%)

Query: 1   MVALYAAVMDTITTYTGLSPAAFFTILALMCVVYKTVCSMFVDPE----PP-------ED 49
           M   + + M+ IT YTGLSP AFFTILA M  V++ V SMFV PE    PP         
Sbjct: 1   MEFYWKSAMEQITWYTGLSPTAFFTILAAMIFVFQMVSSMFVSPEEFNKPPTVAISSSNS 60

Query: 50  LKNKLISSSAAASAATAANFSNQTMIPETVQLGDVTEHELRAYDGSDPNKPLLMAIKGQI 109
             + L  + + A A+ A            VQ+G +TE +LRAY+GSDPNKPLLMAIKGQI
Sbjct: 61  SNSNLFVNDSGADASLA------------VQVGRLTEQQLRAYNGSDPNKPLLMAIKGQI 108

Query: 110 YDVSRSRMFYGPGGPYAMFAGRDASRALALMSFDPQDLTGNIEGLSDSELEVLQDWEYKF 169
           YDVS  RMFYGPG PY+MF G+DASRALAL+SF P+D+ GNIEGL++ EL +LQDWEYKF
Sbjct: 109 YDVSSGRMFYGPGSPYSMFVGKDASRALALLSFKPEDINGNIEGLNEEELVILQDWEYKF 168

Query: 170 MEKYVKVGQIVSE-QTSKPTKNGDKVPE--NQNHD 201
           MEKYVKVG++V E + ++ ++NG +  E   + HD
Sbjct: 169 MEKYVKVGELVPEGELNEHSENGHQNSETTQEEHD 203

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|307136132|gb|ADN33977.1| steroid binding protein [Cucumis melo subsp. melo]

 Score =  218 bits (555), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 115/211 (54%), Positives = 144/211 (68%), Gaps = 26/211 (12%)

Query: 5   YAAVMDTITTYTGLSPAAFFTILALMCVVYKTVCSMFVDPE----PP-------EDLKNK 53
           + + M+ IT YTGLSP AFFTILA M  V++ V SMFV PE    PP           + 
Sbjct: 5   WRSAMEQITWYTGLSPTAFFTILAAMIFVFQMVSSMFVSPEEFNKPPTVPISSSNSSNSN 64

Query: 54  LISSSAAASAATAANFSNQTMIPETVQLGDVTEHELRAYDGSDPNKPLLMAIKGQIYDVS 113
           L  + +AA A+ A            V +G +TE +LRAY+GSDPNKPLLMAIKGQIYDVS
Sbjct: 65  LFVNDSAADASQA------------VLVGRLTEQQLRAYNGSDPNKPLLMAIKGQIYDVS 112

Query: 114 RSRMFYGPGGPYAMFAGRDASRALALMSFDPQDLTGNIEGLSDSELEVLQDWEYKFMEKY 173
             R+FYGPG PY+MF G+DASRALAL+SF P+D+ GNIEGLS+ EL +LQDWEYKFMEKY
Sbjct: 113 SGRIFYGPGSPYSMFVGKDASRALALLSFKPEDINGNIEGLSEEELVILQDWEYKFMEKY 172

Query: 174 VKVGQIVSE-QTSKPTKNGDKVPENQN--HD 201
           VKVG++V E + ++ ++NG +  E     HD
Sbjct: 173 VKVGELVPEGELNEHSENGHQNSETTQVEHD 203

Source: Cucumis melo subsp. melo

Species: Cucumis melo

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297816096|ref|XP_002875931.1| membrane-associated progesterone binding protein 3 [Arabidopsis lyrata subsp. lyrata] gi|297321769|gb|EFH52190.1| membrane-associated progesterone binding protein 3 [Arabidopsis lyrata subsp. lyrata]

 Score =  214 bits (545), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 109/181 (60%), Positives = 127/181 (70%), Gaps = 18/181 (9%)

Query: 1   MVALYAAVMDTITTYTGLSPAAFFTILALMCVVYKTVCSMFVDPE--PPEDLKNKLISSS 58
           +V ++  + +TIT YTGLSPAAFFT+LAL   VY+ V   FV PE   P  L+ +  S  
Sbjct: 2   VVQIWETLKETITAYTGLSPAAFFTVLALAFAVYQVVSGFFVSPEVHRPRSLEVQPQSEP 61

Query: 59  AAASAATAANFSNQTMIPETVQLGDVTEHELRAYDGSDPNKPLLMAIKGQIYDVSRSRMF 118
                           +P  VQLG++TE EL+ YDGSD  KPLLMAIKGQIYDVS+SRMF
Sbjct: 62  ----------------LPPPVQLGEITEEELKLYDGSDSKKPLLMAIKGQIYDVSQSRMF 105

Query: 119 YGPGGPYAMFAGRDASRALALMSFDPQDLTGNIEGLSDSELEVLQDWEYKFMEKYVKVGQ 178
           YGPGGPYA+FAG+DASRALA MSF+ QDLTG+I GL   ELE LQDWEYKFM KYVKVG 
Sbjct: 106 YGPGGPYALFAGKDASRALAKMSFEDQDLTGDISGLGAFELEALQDWEYKFMSKYVKVGT 165

Query: 179 I 179
           I
Sbjct: 166 I 166

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|15229044|ref|NP_190458.1| membrane steroid-binding protein 2 [Arabidopsis thaliana] gi|59800223|sp|Q9M2Z4.1|MSBP2_ARATH RecName: Full=Membrane steroid-binding protein 2; Short=AtMP2 gi|16930427|gb|AAL31899.1|AF419567_1 AT3g48890/T21J18_160 [Arabidopsis thaliana] gi|7576227|emb|CAB87917.1| putative progesterone-binding protein homolog Atmp2 [Arabidopsis thaliana] gi|19310509|gb|AAL84988.1| AT3g48890/T21J18_160 [Arabidopsis thaliana] gi|332644949|gb|AEE78470.1| membrane steroid-binding protein 2 [Arabidopsis thaliana]

 Score =  213 bits (543), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 108/178 (60%), Positives = 125/178 (70%), Gaps = 18/178 (10%)

Query: 4   LYAAVMDTITTYTGLSPAAFFTILALMCVVYKTVCSMFVDPE--PPEDLKNKLISSSAAA 61
           ++  + +TIT YTGLSPAAFFT+LAL   VY+ V   FV PE   P  L+ +  S     
Sbjct: 5   IWETLKETITAYTGLSPAAFFTVLALAFAVYQVVSGFFVSPEVHRPRSLEVQPQSEP--- 61

Query: 62  SAATAANFSNQTMIPETVQLGDVTEHELRAYDGSDPNKPLLMAIKGQIYDVSRSRMFYGP 121
                        +P  VQLG++TE EL+ YDGSD  KPLLMAIKGQIYDVS+SRMFYGP
Sbjct: 62  -------------LPPPVQLGEITEEELKLYDGSDSKKPLLMAIKGQIYDVSQSRMFYGP 108

Query: 122 GGPYAMFAGRDASRALALMSFDPQDLTGNIEGLSDSELEVLQDWEYKFMEKYVKVGQI 179
           GGPYA+FAG+DASRALA MSF+ QDLTG+I GL   ELE LQDWEYKFM KYVKVG I
Sbjct: 109 GGPYALFAGKDASRALAKMSFEDQDLTGDISGLGAFELEALQDWEYKFMSKYVKVGTI 166

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224284631|gb|ACN40048.1| unknown [Picea sitchensis] gi|224284943|gb|ACN40201.1| unknown [Picea sitchensis] gi|224285699|gb|ACN40565.1| unknown [Picea sitchensis]

 Score =  213 bits (542), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 103/178 (57%), Positives = 128/178 (71%), Gaps = 17/178 (9%)

Query: 2   VALYAAVMDTITTYTGLSPAAFFTILALMCVVYKTVCSMFVDPEPPEDLKNKLISSSAAA 61
           + L+ A+M+ I  YTGL+P  FFT++A++  VY  V  MF  P  P+ +  + ++     
Sbjct: 1   MGLWGALMEAIPAYTGLTPVTFFTLVAVLVGVYNLVSGMFAGP--PQHVSREAVAMEP-- 56

Query: 62  SAATAANFSNQTMIPETVQLGDVTEHELRAYDGSDPNKPLLMAIKGQIYDVSRSRMFYGP 121
                        +P  VQLG+VTE EL+AYDGSDP KPLLMAIKGQIYDV++SRMFYGP
Sbjct: 57  -------------LPPPVQLGEVTEEELKAYDGSDPKKPLLMAIKGQIYDVTQSRMFYGP 103

Query: 122 GGPYAMFAGRDASRALALMSFDPQDLTGNIEGLSDSELEVLQDWEYKFMEKYVKVGQI 179
           GGPYA+FAG+DASRALA MSF+ +DLTG+IEGL   EL+ LQDWEYKFM KYVKVGQI
Sbjct: 104 GGPYALFAGKDASRALAKMSFEEKDLTGDIEGLGPFELDALQDWEYKFMGKYVKVGQI 161

Source: Picea sitchensis

Species: Picea sitchensis

Genus: Picea

Family: Pinaceae

Order: Coniferales

Class: Coniferopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|4960154|gb|AAD34615.1|AF153283_1 putative progesterone-binding protein homolog [Arabidopsis thaliana]

 Score =  213 bits (542), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 108/178 (60%), Positives = 125/178 (70%), Gaps = 18/178 (10%)

Query: 4   LYAAVMDTITTYTGLSPAAFFTILALMCVVYKTVCSMFVDPE--PPEDLKNKLISSSAAA 61
           ++  + +TIT YTGLSPAAFFT+LAL   VY+ V   FV PE   P  L+ +  S     
Sbjct: 5   IWETLKETITAYTGLSPAAFFTVLALAFAVYQVVSGFFVSPEVHRPRSLEVQPQSEP--- 61

Query: 62  SAATAANFSNQTMIPETVQLGDVTEHELRAYDGSDPNKPLLMAIKGQIYDVSRSRMFYGP 121
                        +P  VQLG++TE EL+ YDGSD  KPLLMAIKGQIYDVS+SRMFYGP
Sbjct: 62  -------------LPPPVQLGEITEEELKLYDGSDSKKPLLMAIKGQIYDVSQSRMFYGP 108

Query: 122 GGPYAMFAGRDASRALALMSFDPQDLTGNIEGLSDSELEVLQDWEYKFMEKYVKVGQI 179
           GGPYA+FAG+DASRALA MSF+ QDLTG+I GL   ELE LQDWEYKFM KYVKVG I
Sbjct: 109 GGPYALFAGKDASRALAKMSFEDQDLTGDISGLGAFELEALQDWEYKFMSKYVKVGTI 166

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|116784123|gb|ABK23222.1| unknown [Picea sitchensis]

 Score =  213 bits (542), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 103/178 (57%), Positives = 128/178 (71%), Gaps = 17/178 (9%)

Query: 2   VALYAAVMDTITTYTGLSPAAFFTILALMCVVYKTVCSMFVDPEPPEDLKNKLISSSAAA 61
           + L+ A+M+ I  YTGL+P  FFT++A++  VY  V  MF  P  P+ +  + ++     
Sbjct: 1   MGLWGALMEAIPAYTGLTPVTFFTLVAVLVGVYNLVSGMFAGP--PQHVSREAVAMEP-- 56

Query: 62  SAATAANFSNQTMIPETVQLGDVTEHELRAYDGSDPNKPLLMAIKGQIYDVSRSRMFYGP 121
                        +P  VQLG+VTE EL+AYDGSDP KPLLMAIKGQIYDV++SRMFYGP
Sbjct: 57  -------------LPPPVQLGEVTEEELKAYDGSDPKKPLLMAIKGQIYDVTQSRMFYGP 103

Query: 122 GGPYAMFAGRDASRALALMSFDPQDLTGNIEGLSDSELEVLQDWEYKFMEKYVKVGQI 179
           GGPYA+FAG+DASRALA MSF+ +DLTG+IEGL   EL+ LQDWEYKFM KYVKVGQI
Sbjct: 104 GGPYALFAGKDASRALAKMSFEEKDLTGDIEGLGPFELDALQDWEYKFMGKYVKVGQI 161

Source: Picea sitchensis

Species: Picea sitchensis

Genus: Picea

Family: Pinaceae

Order: Coniferales

Class: Coniferopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	203
TAIR|locus:2099453	233	MAPR3 "membrane-associated pro	0.517	0.450	0.771	9.9e-52
TAIR|locus:2145101	220	MSBP1 "membrane steroid bindin	0.926	0.854	0.484	1.9e-44
FB|FBgn0030703	248	MSBP "membrane steroid binding	0.610	0.5	0.450	1.8e-23
TAIR|locus:2047401	100	MAPR2 "membrane-associated pro	0.487	0.99	0.484	1.8e-23
ASPGD|ASPL0000077297	167	AN4939 [Emericella nidulans (t	0.561	0.682	0.434	1.5e-21
RGD|70890	195	Pgrmc1 "progesterone receptor	0.561	0.584	0.433	6.3e-21
UNIPROTKB|O00264	195	PGRMC1 "Membrane-associated pr	0.566	0.589	0.421	1.7e-20
MGI|MGI:1858305	195	Pgrmc1 "progesterone receptor	0.561	0.584	0.425	1.7e-20
UNIPROTKB|Q17QC0	194	PGRMC1 "Membrane-associated pr	0.561	0.587	0.434	2.7e-20
UNIPROTKB|Q95250	194	PGRMC1 "Membrane-associated pr	0.566	0.592	0.413	3.5e-20

TAIR|locus:2099453 MAPR3 "membrane-associated progesterone binding protein 3" [Arabidopsis thaliana (taxid:3702)]

 Score = 428 (155.7 bits), Expect = 9.9e-52, Sum P(2) = 9.9e-52
 Identities = 81/105 (77%), Positives = 90/105 (85%)

Query:    75 IPETVQLGDVTEHELRAYDGSDPNKPLLMAIKGQIYDVSRSRMFYGPGGPYAMFAGRDAS 134
             +P  VQLG++TE EL+ YDGSD  KPLLMAIKGQIYDVS+SRMFYGPGGPYA+FAG+DAS
Sbjct:    62 LPPPVQLGEITEEELKLYDGSDSKKPLLMAIKGQIYDVSQSRMFYGPGGPYALFAGKDAS 121

Query:   135 RALALMSFDPQDLTGNIEGLSDSELEVLQDWEYKFMEKYVKVGQI 179
             RALA MSF+ QDLTG+I GL   ELE LQDWEYKFM KYVKVG I
Sbjct:   122 RALAKMSFEDQDLTGDISGLGAFELEALQDWEYKFMSKYVKVGTI 166

GO:0005886 "plasma membrane" evidence=ISM

GO:0020037 "heme binding" evidence=IEA

GO:0009535 "chloroplast thylakoid membrane" evidence=IDA

GO:0005634 "nucleus" evidence=IDA

GO:0009684 "indoleacetic acid biosynthetic process" evidence=RCA

GO:0009723 "response to ethylene stimulus" evidence=RCA

GO:0042742 "defense response to bacterium" evidence=RCA

GO:0048523 "negative regulation of cellular process" evidence=RCA

GO:0005783 "endoplasmic reticulum" evidence=IDA

TAIR|locus:2145101 MSBP1 "membrane steroid binding protein 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 468 (169.8 bits), Expect = 1.9e-44, P = 1.9e-44
 Identities = 96/198 (48%), Positives = 123/198 (62%)

Query:     4 LYAAVMDTITTYTGLSPAAFFTILALMCVVYKTVCSMFVDPEPPEDLKNKLIXXXXXXXX 63
             L+  + + I  YTGLSP  FFT LAL   +Y+ +   F  P   +D+             
Sbjct:     5 LWQTLKEAIHAYTGLSPVVFFTALALAFAIYQVISGWFASPF--DDVNRHQRARSLAQ-- 60

Query:    64 XXXXNFSNQTMIPETVQLGDVTEHELRAYDGSDPNKPLLMAIKGQIYDVSRSRMFYGPGG 123
                     +  IP+ VQ+G++TE EL+ YDGSDP KPLLMAIK QIYDV++SRMFYGPGG
Sbjct:    61 ------EEEPPIPQPVQVGEITEEELKQYDGSDPQKPLLMAIKHQIYDVTQSRMFYGPGG 114

Query:   124 PYAMFAGRDASRALALMSFDPQDLTGNIEGLSDSELEVLQDWEYKFMEKYVKVGQIVSEQ 183
             PYA+FAG+DASRALA MSF+ +DLT ++ GL   EL+ LQDWEYKFM KY KVG +    
Sbjct:   115 PYALFAGKDASRALAKMSFEEKDLTWDVSGLGPFELDALQDWEYKFMSKYAKVGTVKVAG 174

Query:   184 TSKPTKNGDKVPENQNHD 201
             +   T +  +  EN   D
Sbjct:   175 SEPETASVSEPTENVEQD 192

GO:0005886 "plasma membrane" evidence=ISM;IDA

GO:0020037 "heme binding" evidence=IEA

GO:0005496 "steroid binding" evidence=IDA

GO:0030308 "negative regulation of cell growth" evidence=IMP

GO:0005783 "endoplasmic reticulum" evidence=IDA

GO:0005794 "Golgi apparatus" evidence=IDA

GO:0006888 "ER to Golgi vesicle-mediated transport" evidence=RCA

GO:0048523 "negative regulation of cellular process" evidence=RCA

FB|FBgn0030703 MSBP "membrane steroid binding protein" [Drosophila melanogaster (taxid:7227)]

 Score = 270 (100.1 bits), Expect = 1.8e-23, P = 1.8e-23
 Identities = 59/131 (45%), Positives = 87/131 (66%)

Query:    76 PETVQLG-DVTEHELRAYDGSDPNKPLLMAIKGQIYDVSRSRMFYGPGGPYAMFAGRDAS 134
             PE  ++  D T  ELR YDG+ P+  +L+A+ G +YDVS+ R FYGPGGPYA FAGRDAS
Sbjct:    74 PELPKIRRDFTVKELRQYDGTQPDGRVLVAVNGSVYDVSKGRRFYGPGGPYATFAGRDAS 133

Query:   135 RALA---LMSFDPQDLTGNIEGLSDSELEVLQDWEYKFMEKYVKVGQIVSEQTSKPTK-N 190
             R LA   ++S D +D   ++  LS  E++ +++WE +F EKY  VG+++  +  +PT  +
Sbjct:   134 RNLATFSVVSID-KDEYDDLSDLSAVEMDSVREWEMQFKEKYELVGKLL-RKGEEPTNYD 191

Query:   191 GDKVPENQNHD 201
              D+  EN N+D
Sbjct:   192 DDEDEENVNND 202

GO:0020037 "heme binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=IDA

GO:0035100 "ecdysone binding" evidence=IDA

TAIR|locus:2047401 MAPR2 "membrane-associated progesterone binding protein 2" [Arabidopsis thaliana (taxid:3702)]

 Score = 270 (100.1 bits), Expect = 1.8e-23, P = 1.8e-23
 Identities = 48/99 (48%), Positives = 73/99 (73%)

Query:    83 DVTEHELRAYDGSDPNKPLLMAIKGQIYDVSRSRMFYGPGGPYAMFAGRDASRALALMSF 142
             + T  +L  Y+G+D +KP+ +AIKG+++DV+  + FYG GG Y+MFAG+DASRAL  MS 
Sbjct:     2 EFTAEQLSQYNGTDESKPIYVAIKGRVFDVTTGKSFYGSGGDYSMFAGKDASRALGKMSK 61

Query:   143 DPQDLTGNIEGLSDSELEVLQDWEYKFMEKYVKVGQIVS 181
             + +D++ ++EGL++ E+  L DWE KF  KY  VG++VS
Sbjct:    62 NEEDVSPSLEGLTEKEINTLNDWETKFEAKYPVVGRVVS 100

GO:0005576 "extracellular region" evidence=ISM

GO:0020037 "heme binding" evidence=IEA

GO:0005829 "cytosol" evidence=IDA

ASPGD|ASPL0000077297 AN4939 [Emericella nidulans (taxid:162425)]

 Score = 252 (93.8 bits), Expect = 1.5e-21, P = 1.5e-21
 Identities = 53/122 (43%), Positives = 78/122 (63%)

Query:    76 PETVQLGDVTEHELRAYDGSDPNKPLLMAIKGQIYDVSRSRMFYGPGGPYAMFAGRDASR 135
             P  V     T   L  ++G + +KP+ +A++G+++DV+  R FYGPGGPY  FAGRDASR
Sbjct:    47 PAPVVFRTFTPKTLLPFNGEN-DKPVYLAVRGRVFDVTPGRNFYGPGGPYENFAGRDASR 105

Query:   136 ALALMSFDPQ----DLTGNIEGLSD---SELEVLQDWEYKFMEKYVKVGQIVSEQTSKPT 188
              LA  SFD +    DL+G ++ L D    +LE LQ WE +F+EKY+ VG++V+E   +  
Sbjct:   106 GLAFQSFDKEMLTEDLSGPLDDLKDLNADQLENLQSWEERFLEKYLVVGKLVAEGDPEAP 165

Query:   189 KN 190
             K+
Sbjct:   166 KS 167

GO:0032443 "regulation of ergosterol biosynthetic process" evidence=IEA

GO:0006696 "ergosterol biosynthetic process" evidence=IEA

GO:0005768 "endosome" evidence=IEA

GO:0005783 "endoplasmic reticulum" evidence=IEA

GO:0020037 "heme binding" evidence=IEA

GO:0008047 "enzyme activator activity" evidence=IEA

RGD|70890 Pgrmc1 "progesterone receptor membrane component 1" [Rattus norvegicus (taxid:10116)]

 Score = 246 (91.7 bits), Expect = 6.3e-21, P = 6.3e-21
 Identities = 52/120 (43%), Positives = 73/120 (60%)

Query:    83 DVTEHELRAYDG-SDPNKPLLMAIKGQIYDVSRSRMFYGPGGPYAMFAGRDASRALALMS 141
             D T  ELR YDG  DP   +LMAI G+++DV++ R FYGP GPY +FAGRDASR LA   
Sbjct:    72 DFTPAELRRYDGVQDPR--ILMAINGKVFDVTKGRKFYGPEGPYGVFAGRDASRGLATFC 129

Query:   142 FDPQDLTGNIEGLSD---SELEVLQDWEYKFMEKYVKVGQIVSEQTSKPTKNGDKVPENQ 198
              D + L    + LSD   ++ E L DW+ +F  KY  VG+++ E       + D+ P+++
Sbjct:   130 LDKEALKDEYDDLSDLTPAQQETLNDWDSQFTFKYHHVGKLLKEGEEPTVYSDDEEPKDE 189

GO:0005496 "steroid binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISO

GO:0005730 "nucleolus" evidence=IEA;ISO

GO:0005783 "endoplasmic reticulum" evidence=ISO

GO:0005789 "endoplasmic reticulum membrane" evidence=IEA

GO:0007411 "axon guidance" evidence=IEP

GO:0009986 "cell surface" evidence=IEA;ISO

GO:0016021 "integral to membrane" evidence=IEA

GO:0020037 "heme binding" evidence=IEA

UNIPROTKB|O00264 PGRMC1 "Membrane-associated progesterone receptor component 1" [Homo sapiens (taxid:9606)]

 Score = 242 (90.2 bits), Expect = 1.7e-20, P = 1.7e-20
 Identities = 51/121 (42%), Positives = 74/121 (61%)

Query:    83 DVTEHELRAYDG-SDPNKPLLMAIKGQIYDVSRSRMFYGPGGPYAMFAGRDASRALALMS 141
             D T  ELR +DG  DP   +LMAI G+++DV++ R FYGP GPY +FAGRDASR LA   
Sbjct:    72 DFTPAELRRFDGVQDPR--ILMAINGKVFDVTKGRKFYGPEGPYGVFAGRDASRGLATFC 129

Query:   142 FDPQDLTGNIEGLSD---SELEVLQDWEYKFMEKYVKVGQIVSEQTSKPTKNGDKVPENQ 198
              D + L    + LSD   ++ E L DWE +F  KY  VG+++ E       + ++ P+++
Sbjct:   130 LDKEALKDEYDDLSDLTAAQQETLSDWESQFTFKYHHVGKLLKEGEEPTVYSDEEEPKDE 189

Query:   199 N 199
             +
Sbjct:   190 S 190

GO:0020037 "heme binding" evidence=IEA

GO:0005496 "steroid binding" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0007411 "axon guidance" evidence=IEA

GO:0005789 "endoplasmic reticulum membrane" evidence=IEA

GO:0009986 "cell surface" evidence=IDA

GO:0005515 "protein binding" evidence=IPI

GO:0005634 "nucleus" evidence=IDA

GO:0005730 "nucleolus" evidence=IDA

GO:0005783 "endoplasmic reticulum" evidence=IDA

MGI|MGI:1858305 Pgrmc1 "progesterone receptor membrane component 1" [Mus musculus (taxid:10090)]

 Score = 242 (90.2 bits), Expect = 1.7e-20, P = 1.7e-20
 Identities = 51/120 (42%), Positives = 73/120 (60%)

Query:    83 DVTEHELRAYDG-SDPNKPLLMAIKGQIYDVSRSRMFYGPGGPYAMFAGRDASRALALMS 141
             D T  ELR +DG  DP   +LMAI G+++DV++ R FYGP GPY +FAGRDASR LA   
Sbjct:    72 DFTPAELRRFDGVQDPR--ILMAINGKVFDVTKGRKFYGPEGPYGVFAGRDASRGLATFC 129

Query:   142 FDPQDLTGNIEGLSD---SELEVLQDWEYKFMEKYVKVGQIVSEQTSKPTKNGDKVPENQ 198
              D + L    + LSD   ++ E L DW+ +F  KY  VG+++ E       + D+ P+++
Sbjct:   130 LDKEALKDEYDDLSDLTPAQQETLSDWDSQFTFKYHHVGKLLKEGEEPTVYSDDEEPKDE 189

GO:0005496 "steroid binding" evidence=IEA

GO:0005783 "endoplasmic reticulum" evidence=IEA

GO:0008289 "lipid binding" evidence=IEA

GO:0009986 "cell surface" evidence=ISO

GO:0016020 "membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0020037 "heme binding" evidence=IEA

GO:0043231 "intracellular membrane-bounded organelle" evidence=IEA

UNIPROTKB|Q17QC0 PGRMC1 "Membrane-associated progesterone receptor component 1" [Bos taurus (taxid:9913)]

 Score = 240 (89.5 bits), Expect = 2.7e-20, P = 2.7e-20
 Identities = 53/122 (43%), Positives = 76/122 (62%)

Query:    83 DVTEHELRAYDG-SDPNKPLLMAIKGQIYDVSRSRMFYGPGGPYAMFAGRDASRALALMS 141
             D T  ELR +DG  DP   +LMAI G+++DV++ R FYGP GPY +FAGRDASR LA   
Sbjct:    71 DFTPAELRRFDGVQDPR--ILMAINGKVFDVTKGRKFYGPEGPYGVFAGRDASRGLATFC 128

Query:   142 FDPQDLTGNIEGLSD---SELEVLQDWEYKFMEKYVKVGQIVSEQTSKPTKNGDKV-PEN 197
              D + L    + LSD   ++ E L DW+ +F  KY  VG+++ +   +PT   DK  P++
Sbjct:   129 LDKEALKDEYDDLSDLTPAQQETLSDWDSQFTFKYHHVGKLLKDG-EEPTVYSDKEEPKD 187

Query:   198 QN 199
             ++
Sbjct:   188 ES 189

GO:0005789 "endoplasmic reticulum membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0005496 "steroid binding" evidence=IEA

GO:0020037 "heme binding" evidence=IEA

UNIPROTKB|Q95250 PGRMC1 "Membrane-associated progesterone receptor component 1" [Sus scrofa (taxid:9823)]

 Score = 239 (89.2 bits), Expect = 3.5e-20, P = 3.5e-20
 Identities = 50/121 (41%), Positives = 74/121 (61%)

Query:    83 DVTEHELRAYDG-SDPNKPLLMAIKGQIYDVSRSRMFYGPGGPYAMFAGRDASRALALMS 141
             D T  ELR +DG  DP   +LMAI G+++DV++ R FYGP GPY +FAGRDASR LA   
Sbjct:    71 DFTPAELRRFDGVQDPR--ILMAINGKVFDVTKGRKFYGPEGPYGVFAGRDASRGLATFC 128

Query:   142 FDPQDLTGNIEGLSD---SELEVLQDWEYKFMEKYVKVGQIVSEQTSKPTKNGDKVPENQ 198
              D + L    + LSD   ++ E L DW+ +F  KY  VG+++ E       + ++ P+++
Sbjct:   129 LDKEALKDEYDDLSDLTPAQQETLNDWDSQFTFKYHHVGKLLKEGEEPTVYSDEEEPKDE 188

Query:   199 N 199
             +
Sbjct:   189 S 189

GO:0005789 "endoplasmic reticulum membrane" evidence=IEA

GO:0009986 "cell surface" evidence=IEA

GO:0005730 "nucleolus" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0005496 "steroid binding" evidence=IEA

GO:0020037 "heme binding" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q9M2Z4	MSBP2_ARATH	No assigned EC number	0.6067	0.7881	0.6866	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: estExt_Genewise1_v1.C_LG_XV2818 hypothetical protein (179 aa) (Populus trichocarpa)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	203
pfam00173	74	pfam00173, Cyt-b5, Cytochrome b5-like Heme/Steroid	2e-14

>gnl|CDD|201057 pfam00173, Cyt-b5, Cytochrome b5-like Heme/Steroid binding domain

 Score = 64.9 bits (159), Expect = 2e-14
 Identities = 23/99 (23%), Positives = 41/99 (41%), Gaps = 27/99 (27%)

Query: 84  VTEHELRAYDGSDPNKPLLMAIKGQIYDVSRSRMFYGPGG--PYAMFAGRDASRALALMS 141
            T  E++ ++    +    + I G++YDV+R  +   PGG       AG+DA+ A     
Sbjct: 1   FTLEEVKKHN---KDGDCWIVINGKVYDVTR-FLKDHPGGEDVILSAAGKDATEAF---- 52

Query: 142 FDPQDLTGNIEGLSDSELEVLQDWEYKFMEKYVKVGQIV 180
                           E  +  +   K +EKY +VG++ 
Sbjct: 53  ----------------EDAIHSEAARKLLEKY-RVGELD 74

This family includes heme binding domains from a diverse range of proteins. This family also includes proteins that bind to steroids. The family includes progesterone receptors. Many members of this subfamily are membrane anchored by an N-terminal transmembrane alpha helix. This family also includes a domain in some chitin synthases. There is no known ligand for this domain in the chitin synthases. Length = 74

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	203
KOG1110	183	consensus Putative steroid membrane receptor Hpr6.	100.0
KOG1108	281	consensus Predicted heme/steroid binding protein [	99.97
PF00173	76	Cyt-b5: Cytochrome b5-like Heme/Steroid binding do	99.61
COG4892	81	Predicted heme/steroid binding protein [General fu	99.57
KOG0536	145	consensus Flavohemoprotein b5+b5R [Energy producti	99.21
KOG0537	124	consensus Cytochrome b5 [Energy production and con	99.01
COG5274	164	CYB5 Cytochrome b involved in lipid metabolism [En	98.53
PLN03198	526	delta6-acyl-lipid desaturase; Provisional	98.38
PLN03199	485	delta6-acyl-lipid desaturase-like protein; Provisi	98.32
PLN02252	888	nitrate reductase [NADPH]	98.27
KOG4232	430	consensus Delta 6-fatty acid desaturase/delta-8 sp	97.2
KOG4576	167	consensus Sulfite oxidase, heme-binding component	93.93

>KOG1110 consensus Putative steroid membrane receptor Hpr6

Probab=100.00  E-value=6e-49  Score=329.53  Aligned_cols=175  Identities=41%  Similarity=0.688  Sum_probs=147.2

Q ss_pred             hhCCChHHHHHHHHHHHHHHHHHhccccCCCCCCcchhhhhhhHHHhhHHHhhhccCCCCCCCccccCCCCHHHHhhhcC
Q 028815           15 YTGLSPAAFFTILALMCVVYKTVCSMFVDPEPPEDLKNKLISSSAAASAATAANFSNQTMIPETVQLGDVTEHELRAYDG   94 (203)
Q Consensus        15 ~tglsp~~~~t~~~~~~~~y~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~fT~eELa~ydG   94 (203)
                      |+||+|..++|.++++++++.++..++.++...-..    .       .+.+...+.+|.. .+.+.++||.+||++|||
T Consensus         1 ~~gl~~~~~~tpl~~al~~~~l~~~~kl~~~~~r~~----~-------~~~~~~~~~~P~~-~~P~~~dfT~eEL~~ydG   68 (183)
T KOG1110|consen    1 YVGLAPKVFFTPLALALLIFLLFVGLKLSRFKFRRD----S-------EKSDGSTEEPPKE-SLPKVRDFTVEELRQYDG   68 (183)
T ss_pred             CCccchhhhhhhHHHHHHHHHHHhheeeeeeecccc----c-------cccccCCCCCCcc-CCCcccccCHHHHHhcCC
Confidence            689999999999999999999999988775311010    0       0001111111211 223335999999999999


Q ss_pred             CCCCCCeEEEEcCeEEecccccccccCCCcccccccCChhHHHhhhCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhhcCc
Q 028815           95 SDPNKPLLMAIKGQIYDVSRSRMFYGPGGPYAMFAGRDASRALALMSFDPQDLTGNIEGLSDSELEVLQDWEYKFMEKYV  174 (203)
Q Consensus        95 ~~~~~piylAI~G~VYDVT~g~~fYgPGG~Y~~fAGrDaSrala~~sf~~e~l~~dl~~L~~~el~~L~~W~~~F~~KYp  174 (203)
                      .++++||||||||+|||||+|+.||||||+|..||||||||+|++|||+..++++|++||+..|+++|++|+++|+.||+
T Consensus        69 s~~d~~Il~AI~G~VYDVT~Gr~FYGp~GpY~~fAG~DASR~La~~s~d~~d~~ddlsdL~a~e~eal~eWE~~fk~KY~  148 (183)
T KOG1110|consen   69 SDPDKPILLAINGKVYDVTRGREFYGPGGPYSLFAGKDASRGLAKMSFDLSDETDDLSDLTAEELEALNEWETKFKAKYP  148 (183)
T ss_pred             CCCCCceEEEecceEEEecCCccccCCCCCchhhcccchHHHHHhcccchhhccccccccCHHHHHHHHHHHHHHhhcCc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             eeEEEecCC--CCCCCCCCCCCCCCCCCC
Q 028815          175 KVGQIVSEQ--TSKPTKNGDKVPENQNHD  201 (203)
Q Consensus       175 ~VG~L~~~~--~~~~s~~~~~~p~~~~~~  201 (203)
                      +||+|++..  ..++|++++++...|+++
T Consensus       149 ~VG~L~~~~~e~~~~s~~~~~~~~~~~~~  177 (183)
T KOG1110|consen  149 VVGRLVKKGEENEEYSPEEDTKDAAQDQM  177 (183)
T ss_pred             eeEEeecCCcccccCCccccccccccccc
Confidence            999999986  449999999999988775

6/25-Dx [General function prediction only]

>KOG1108 consensus Predicted heme/steroid binding protein [General function prediction only]

Probab=99.97  E-value=3e-31  Score=231.02  Aligned_cols=103  Identities=37%  Similarity=0.678  Sum_probs=100.4

Q ss_pred             cCCCCHHHHhhhcCCCCCCCeEEEEcCeEEecccccccccCCCcccccccCChhHHHhhhCCCCCCCCCCCCCCCHHHHH
Q 028815           81 LGDVTEHELRAYDGSDPNKPLLMAIKGQIYDVSRSRMFYGPGGPYAMFAGRDASRALALMSFDPQDLTGNIEGLSDSELE  160 (203)
Q Consensus        81 ~~~fT~eELa~ydG~~~~~piylAI~G~VYDVT~g~~fYgPGG~Y~~fAGrDaSrala~~sf~~e~l~~dl~~L~~~el~  160 (203)
                      ...||+|||++|||+++++||||||.|.|||||+++.+||||++|++||||||||||.++.|.+..+.+|+.+|+++|+.
T Consensus        59 k~lFtpeeLa~fnGt~e~~piyLaiLGsVfdVs~gk~hYgsG~sYnhFaGRDASrAFvsGdf~e~gl~d~v~gLs~dEll  138 (281)
T KOG1108|consen   59 KILFTPEELAKFNGTEEGRPIYLAILGSVFDVSRGKKHYGSGCSYNHFAGRDASRAFVSGDFEEPGLADDVLGLSPDELL  138 (281)
T ss_pred             ceeeCHHHHhhccCCCCCCceeeeeeceeeeccCCeeeeCCCCCcccccccccchheecccCCCCcchhhhccCCHHHHh
Confidence            34799999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHhhcCceeEEEecCC
Q 028815          161 VLQDWEYKFMEKYVKVGQIVSEQ  183 (203)
Q Consensus       161 ~L~~W~~~F~~KYp~VG~L~~~~  183 (203)
                      .|.+|..||.+.|++||+|++..
T Consensus       139 si~dWrsFY~k~Y~~vGrv~gry  161 (281)
T KOG1108|consen  139 SIADWRSFYQKDYVYVGRVIGRY  161 (281)
T ss_pred             hhhhhhhhhhcccceeeEEeeee
Confidence            99999999999999999999986

>PF00173 Cyt-b5: Cytochrome b5-like Heme/Steroid binding domain This prints entry is a subset of the Pfam entry; InterPro: IPR001199 Cytochromes b5 are ubiquitous electron transport proteins found in animals, plants and yeasts []

Probab=99.61  E-value=1.4e-15  Score=108.05  Aligned_cols=72  Identities=36%  Similarity=0.504  Sum_probs=61.9

Q ss_pred             CCHHHHhhhcCCCCCCCeEEEEcCeEEecccccccccCCC--cccccccCChhHHHhhhCCCCCCCCCCCCCCCHHHHHH
Q 028815           84 VTEHELRAYDGSDPNKPLLMAIKGQIYDVSRSRMFYGPGG--PYAMFAGRDASRALALMSFDPQDLTGNIEGLSDSELEV  161 (203)
Q Consensus        84 fT~eELa~ydG~~~~~piylAI~G~VYDVT~g~~fYgPGG--~Y~~fAGrDaSrala~~sf~~e~l~~dl~~L~~~el~~  161 (203)
                      ||.+||++||  + +.++||+|+|+|||||... .++|||  .+..+||+|+|.+|                    +...
T Consensus         2 ~t~~el~~h~--~-~~~~~v~i~g~VYDvt~~~-~~hpgg~~~~~~~aG~D~T~~f--------------------~~~~   57 (76)
T PF00173_consen    2 YTWEELAKHN--K-KGDCWVIIDGKVYDVTDFL-DRHPGGADILKKYAGRDATDAF--------------------EEAF   57 (76)
T ss_dssp             EEHHHHTTTE--E-TTEEEEEETTEEEECTTTT-TTSTTTSHHHHTTTTSBTHHHH--------------------HHHT
T ss_pred             CCHHHHhhhC--C-CCCEEEEECCEEccccccc-ccccchhHHHHHhccccccHHH--------------------hhcc
Confidence            7999999999  2 3579999999999999965 579999  68999999999999                    2234


Q ss_pred             HHHHHHHHhhcCceeEEE
Q 028815          162 LQDWEYKFMEKYVKVGQI  179 (203)
Q Consensus       162 L~~W~~~F~~KYp~VG~L  179 (203)
                      ...|..++..+|.+||+|
T Consensus        58 h~~~~~~~l~~~~~vG~l   75 (76)
T PF00173_consen   58 HSWWAEKCLEKYYKVGYL   75 (76)
T ss_dssp             HHHHHHHHHHGCGEEEEE
T ss_pred             CcHHHHHHccCCCEEEEe
Confidence            557888999999999998

The microsomal and mitochondrial variants are membrane-bound, while those from erythrocytes and other animal tissues are water-soluble [, ]. The 3D structure of bovine cyt b5 is known, the fold belonging to the alpha+beta class, with 5 strands and 5 short helices forming a framework for supporting a central haem group []. The cytochrome b5 domain is similar to that of a number of oxidoreductases, such as plant and fungal nitrate reductases, sulphite oxidase, yeast flavocytochrome b2 (L-lactate dehydrogenase) and plant cyt b5/acyl lipid desaturase fusion protein.; GO: 0020037 heme binding; PDB: 2I96_A 3KS0_A 1KBI_B 1KBJ_B 1LTD_A 1SZG_B 1SZF_A 1LDC_B 2OZ0_B 1LCO_A ....

>COG4892 Predicted heme/steroid binding protein [General function prediction only]

Probab=99.57  E-value=2.7e-15  Score=110.61  Aligned_cols=77  Identities=30%  Similarity=0.573  Sum_probs=60.4

Q ss_pred             cCCCCHHHHhhhcCCCCCCCeEEEEcCeEEecccccccccCCCccccc-ccCChhHHHhhh-CCCCCCCCCCCCCCCHHH
Q 028815           81 LGDVTEHELRAYDGSDPNKPLLMAIKGQIYDVSRSRMFYGPGGPYAMF-AGRDASRALALM-SFDPQDLTGNIEGLSDSE  158 (203)
Q Consensus        81 ~~~fT~eELa~ydG~~~~~piylAI~G~VYDVT~g~~fYgPGG~Y~~f-AGrDaSrala~~-sf~~e~l~~dl~~L~~~e  158 (203)
                      +|.||+|||.+|||++  .|+|||++|+|||||-+.. |+-|-+.... ||+|.|..|... ..-               
T Consensus         1 mrefTLEELs~ynG~n--GpaYiA~~G~VYDvS~s~~-W~dGtHqglhsaG~DLs~~~~~~aphg---------------   62 (81)
T COG4892           1 MREFTLEELSKYNGEN--GPAYIAVNGTVYDVSLSPS-WGDGTHQGLHSAGKDLSSEFNSCAPHG---------------   62 (81)
T ss_pred             CceecHHHHHhhcCCC--CCeEEEECCEEEeeccCcc-cCCCccccccccchhHHHHHhhcCCch---------------
Confidence            3689999999999998  3899999999999998864 6767666655 999999888732 111               


Q ss_pred             HHHHHHHHHHHhhcCceeEEEecCC
Q 028815          159 LEVLQDWEYKFMEKYVKVGQIVSEQ  183 (203)
Q Consensus       159 l~~L~~W~~~F~~KYp~VG~L~~~~  183 (203)
                      ++.        -+.||+||.|++..
T Consensus        63 ~ei--------l~~~PvVG~L~k~~   79 (81)
T COG4892          63 MEI--------LTSLPVVGALIKEK   79 (81)
T ss_pred             hHH--------HhcCchhheeeccc
Confidence            112        27899999999764

>KOG0536 consensus Flavohemoprotein b5+b5R [Energy production and conversion]

Probab=99.21  E-value=2.5e-11  Score=98.92  Aligned_cols=74  Identities=31%  Similarity=0.460  Sum_probs=60.3

Q ss_pred             CCCHHHHhhhcCCCCCCCeEEEEcCeEEecccccccccCCCcc--cccccCChhHHHhhhCCCCCCCCCCCCCCCHHHHH
Q 028815           83 DVTEHELRAYDGSDPNKPLLMAIKGQIYDVSRSRMFYGPGGPY--AMFAGRDASRALALMSFDPQDLTGNIEGLSDSELE  160 (203)
Q Consensus        83 ~fT~eELa~ydG~~~~~piylAI~G~VYDVT~g~~fYgPGG~Y--~~fAGrDaSrala~~sf~~e~l~~dl~~L~~~el~  160 (203)
                      .+|.+||++|+-.++   ||++|+|+|||||.... |+|||.-  -..||||||..|.+                     
T Consensus        69 ~vt~~El~KH~~~dD---cW~~i~G~VYnVt~Yl~-fHPgG~d~lmk~aGrD~T~~Fnk---------------------  123 (145)
T KOG0536|consen   69 PVTAEELKKHNKKDD---CWIAIRGKVYNVTAYLD-FHPGGVDELMKHAGRDATKLFNK---------------------  123 (145)
T ss_pred             ccCHHHHHhhCCccc---eEEEEcCEEEecccccc-cCCCCHHHHHHhcCcchHHHHHH---------------------
Confidence            489999999999883   99999999999999975 6999984  47799999999985                     


Q ss_pred             HHHHHHHHHh-hcCceeEEEecC
Q 028815          161 VLQDWEYKFM-EKYVKVGQIVSE  182 (203)
Q Consensus       161 ~L~~W~~~F~-~KYp~VG~L~~~  182 (203)
                       .+.|...=+ =|=.+||.|++.
T Consensus       124 -~H~WVN~e~LL~~c~VGvl~d~  145 (145)
T KOG0536|consen  124 -YHAWVNYEELLKKCFVGVLVDR  145 (145)
T ss_pred             -HHHHhcHHHHHhhceeeeeccC
Confidence             567774322 356789988763

>KOG0537 consensus Cytochrome b5 [Energy production and conversion]

Probab=99.01  E-value=2e-10  Score=91.85  Aligned_cols=56  Identities=30%  Similarity=0.415  Sum_probs=46.9

Q ss_pred             ccCCCCHHHHhhhcCCCCCCCeEEEEcCeEEecccccccccCCCc--ccccccCChhHHHhh
Q 028815           80 QLGDVTEHELRAYDGSDPNKPLLMAIKGQIYDVSRSRMFYGPGGP--YAMFAGRDASRALAL  139 (203)
Q Consensus        80 ~~~~fT~eELa~ydG~~~~~piylAI~G~VYDVT~g~~fYgPGG~--Y~~fAGrDaSrala~  139 (203)
                      ..+.||++|.++||..+   .|||.|+|+|||||+..+ =||||.  ....||+|||++|--
T Consensus         3 ~~k~~~~~EV~kHn~~~---d~Wvii~gkVYDvT~Fl~-eHPGG~~vLl~~AGkDaT~~F~~   60 (124)
T KOG0537|consen    3 DLKYYTLSEVAKHNKKD---DCWVIIHGKVYDVTSFLD-EHPGGEDVLLEYAGKDATEAFED   60 (124)
T ss_pred             ccccccHHHHHhhcCCC---CeEEEECCEEEeccchhh-hCCChHHHHHHHhchhhHHhccc
Confidence            34679999999999766   599999999999998542 388985  568999999998864

>COG5274 CYB5 Cytochrome b involved in lipid metabolism [Energy production and conversion / Lipid metabolism]

Probab=98.53  E-value=1e-07  Score=79.88  Aligned_cols=58  Identities=29%  Similarity=0.458  Sum_probs=48.8

Q ss_pred             CCCCHHHHhhhcCCCCCCCeEEEEcCeEEecccccccccCCCcc--cccccCChhHHHhhhCCC
Q 028815           82 GDVTEHELRAYDGSDPNKPLLMAIKGQIYDVSRSRMFYGPGGPY--AMFAGRDASRALALMSFD  143 (203)
Q Consensus        82 ~~fT~eELa~ydG~~~~~piylAI~G~VYDVT~g~~fYgPGG~Y--~~fAGrDaSrala~~sf~  143 (203)
                      ..++.+|+.+++..+   .+||.|+|+|||||.... +||||.-  ...+|+|||.+|...-.+
T Consensus        50 ~~~~~eev~~h~~~~---d~~ivi~g~VyDvs~fl~-~HPGGe~ii~~~~g~Dat~~f~~~~~~  109 (164)
T COG5274          50 KPITAEEVAKHNKSE---DCWIVINGKVYDVSQFLD-EHPGGEDIIKDTAGKDATKAFNFLHHS  109 (164)
T ss_pred             ccccHHHHHHhcCcc---ceEEEEcCEEEEhhhccc-cCCCcceeehhccCchhhhhhcccccc
Confidence            458999999999987   299999999999998653 6999874  588999999999876443

>PLN03198 delta6-acyl-lipid desaturase; Provisional

Probab=98.38  E-value=2.6e-07  Score=88.94  Aligned_cols=61  Identities=25%  Similarity=0.378  Sum_probs=49.6

Q ss_pred             CCccccCCCCHHHHhhhcCCCCCCCeEEEEcCeEEecccccccccCCCc-ccccccCChhHHHhhh
Q 028815           76 PETVQLGDVTEHELRAYDGSDPNKPLLMAIKGQIYDVSRSRMFYGPGGP-YAMFAGRDASRALALM  140 (203)
Q Consensus        76 ~~P~~~~~fT~eELa~ydG~~~~~piylAI~G~VYDVT~g~~fYgPGG~-Y~~fAGrDaSrala~~  140 (203)
                      .++.+.+.||.+|+++++..+   .|||+|+|+|||||+..+ .+|||. ....+|+|||.+|...
T Consensus        98 ~~~~~~~~~t~~ev~~H~~~~---d~Wivi~gkVYDvT~fl~-~HPGG~~i~~~aG~DaT~~F~~~  159 (526)
T PLN03198         98 SKEKKSKSHLLSEVAAHNKPN---DCWIVIKNKVYDVSDFAA-EHPGGSVISTYFGRDGTDAFSSF  159 (526)
T ss_pred             chhhccCcCCHHHHHhhCCCC---CeEEEECCEEEecHHHHH-hCCCchHHHHhcCCcHhHHHHHh
Confidence            344555689999999999876   499999999999998643 599997 2368999999999653

>PLN03199 delta6-acyl-lipid desaturase-like protein; Provisional

Probab=98.32  E-value=5.6e-07  Score=85.51  Aligned_cols=53  Identities=25%  Similarity=0.378  Sum_probs=45.4

Q ss_pred             CCCCHHHHhhhcCCCCCCCeEEEEcCeEEecccccccccCCCcc-cccccCChhHHHhh
Q 028815           82 GDVTEHELRAYDGSDPNKPLLMAIKGQIYDVSRSRMFYGPGGPY-AMFAGRDASRALAL  139 (203)
Q Consensus        82 ~~fT~eELa~ydG~~~~~piylAI~G~VYDVT~g~~fYgPGG~Y-~~fAGrDaSrala~  139 (203)
                      +.||.+|+++++..+   .+||.|+|+|||||+..  -+|||.- ...||+|||.+|..
T Consensus        24 ~~~s~~ev~~h~~~~---~~wi~i~g~vYDvt~f~--~HPGG~~i~~~aG~DaT~~F~~   77 (485)
T PLN03199         24 QKISWQEVKKHASPD---DAWIIHQNKVYDVSNWH--DHPGGAVIFTHAGDDMTDIFAA   77 (485)
T ss_pred             CccCHHHHHhhCCCC---CeEEEECCEEEcCCCcC--cCCCchHHHhhCCCChhHHHHH
Confidence            569999999998875   48999999999999873  5999972 36799999999965

>PLN02252 nitrate reductase [NADPH]

Probab=98.27  E-value=5.4e-07  Score=91.42  Aligned_cols=56  Identities=25%  Similarity=0.414  Sum_probs=48.0

Q ss_pred             ccCCCCHHHHhhhcCCCCCCCeEEEEcCeEEecccccccccCCCc--ccccccCChhHHHhh
Q 028815           80 QLGDVTEHELRAYDGSDPNKPLLMAIKGQIYDVSRSRMFYGPGGP--YAMFAGRDASRALAL  139 (203)
Q Consensus        80 ~~~~fT~eELa~ydG~~~~~piylAI~G~VYDVT~g~~fYgPGG~--Y~~fAGrDaSrala~  139 (203)
                      ..+.||.+||++|+..+   .+||.|+|+|||||.... .||||.  ...+||+|||..|..
T Consensus       516 ~~~~~t~~ev~~h~~~~---~~Wivi~g~VYDvT~fl~-~HPGG~~~I~~~aG~DaT~~F~~  573 (888)
T PLN02252        516 GSKQYTMSEVRKHNSED---SCWIVVHGHVYDCTRFLK-DHPGGADSILINAGTDCTEEFDA  573 (888)
T ss_pred             ccceeCHHHHHhhCcCC---CeEEEECCEEEeCHHHHH-HCCChHHHHHhhcCCCcHHHHhh
Confidence            45789999999999875   499999999999998643 599995  568999999999974

>KOG4232 consensus Delta 6-fatty acid desaturase/delta-8 sphingolipid desaturase [Lipid transport and metabolism]

Probab=97.20  E-value=0.00015  Score=68.76  Aligned_cols=54  Identities=30%  Similarity=0.477  Sum_probs=46.2

Q ss_pred             CCCCHHHHhhhcCCCCCCCeEEEEcCeEEecccccccccCCCc--ccccccCChhHHHhhh
Q 028815           82 GDVTEHELRAYDGSDPNKPLLMAIKGQIYDVSRSRMFYGPGGP--YAMFAGRDASRALALM  140 (203)
Q Consensus        82 ~~fT~eELa~ydG~~~~~piylAI~G~VYDVT~g~~fYgPGG~--Y~~fAGrDaSrala~~  140 (203)
                      +.+|-|+++++|+.++   .|++|.| |||||.-.. -+|||+  ..+.+|.|||.+|...
T Consensus         8 ~~~~we~~~~~~~~~~---~W~~id~-vYd~s~~~~-~HPGG~~~I~~~~g~DaTdaF~Af   63 (430)
T KOG4232|consen    8 TTFSWEGKRKHDKAEG---LWLVIDG-VYDISDWIK-RHPGGSRVIEHYAGQDATDAFEAF   63 (430)
T ss_pred             eeeeccchhhccCCCc---eEEEeec-cccHHHHHH-hCCCchhHHHHhcCCccchHHHHh
Confidence            4689999999999983   7999999 999998532 489996  5799999999999765

>KOG4576 consensus Sulfite oxidase, heme-binding component [Energy production and conversion]

Probab=93.93  E-value=0.043  Score=45.70  Aligned_cols=45  Identities=20%  Similarity=0.312  Sum_probs=36.5

Q ss_pred             CCCCHHHHhhhcCCCCCCCeEEEEcCeEEecccccccccCCCcccccc
Q 028815           82 GDVTEHELRAYDGSDPNKPLLMAIKGQIYDVSRSRMFYGPGGPYAMFA  129 (203)
Q Consensus        82 ~~fT~eELa~ydG~~~~~piylAI~G~VYDVT~g~~fYgPGG~Y~~fA  129 (203)
                      ..+|.||+++|+...  .+|||-..--|||||.... -+|||.--.+|
T Consensus        80 ~iY~~EEV~~H~s~e--~rIWVTyg~gVyDVTdFv~-~HPGGdKillA  124 (167)
T KOG4576|consen   80 HIYTKEEVSSHTSPE--TRIWVTYGSGVYDVTDFVD-LHPGGDKILLA  124 (167)
T ss_pred             cchhHHHHHhcCCCc--cceEEEecCcceeHHHHHH-hCCCcceeeee
Confidence            358999999998876  5799999999999998654 39999654443

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	203
1t0g_A	109	Hypothetical Protein At2g24940.1 From Arabidopsis T		6e-25
1j03_A	102	Solution Structure Of A Putative Steroid-Binding Pr		1e-24

>pdb|1T0G|A Chain A, Hypothetical Protein At2g24940.1 From Arabidopsis Thaliana Has A Cytochrome B5 Like Fold Length = 109

Iteration: 1
 Score =  110 bits (274), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 49/101 (48%), Positives = 74/101 (73%)
Query: 81  LGDVTEHELRAYDGSDPNKPLLMAIKGQIYDVSRSRMFYGPGGPYAMFAGRDASRALALM 140
           L + T  +L  Y+G+D +KP+ +AIKG+++DV+  + FYG GG Y+MFAG+DASRAL  M
Sbjct: 9   LEEFTAEQLSQYNGTDESKPIYVAIKGRVFDVTTGKSFYGSGGDYSMFAGKDASRALGKM 68
Query: 141 SFDPQDLTGNIEGLSDSELEVLQDWEYKFMEKYVKVGQIVS 181
           S + +D++ ++EGL++ E+  L DWE KF  KY  VG++VS
Sbjct: 69  SKNEEDVSPSLEGLTEKEINTLNDWETKFEAKYPVVGRVVS 109

>pdb|1J03|A Chain A, Solution Structure Of A Putative Steroid-Binding Protein From Arabidopsis Length = 102

Iteration: 1
 Score =  109 bits (272), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 48/99 (48%), Positives = 73/99 (73%)
Query: 83  DVTEHELRAYDGSDPNKPLLMAIKGQIYDVSRSRMFYGPGGPYAMFAGRDASRALALMSF 142
           + T  +L  Y+G+D +KP+ +AIKG+++DV+  + FYG GG Y+MFAG+DASRAL  MS 
Sbjct: 4   EFTAEQLSQYNGTDESKPIYVAIKGRVFDVTTGKSFYGSGGDYSMFAGKDASRALGKMSK 63
Query: 143 DPQDLTGNIEGLSDSELEVLQDWEYKFMEKYVKVGQIVS 181
           + +D++ ++EGL++ E+  L DWE KF  KY  VG++VS
Sbjct: 64  NEEDVSPSLEGLTEKEINTLNDWETKFEAKYPVVGRVVS 102
  Database: pdbaa

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	203
1j03_A	102	Putative steroid binding protein; alpha and beta,	5e-42

>1j03_A Putative steroid binding protein; alpha and beta, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Arabidopsis thaliana} SCOP: d.120.1.2 PDB: 1t0g_A Length = 102

 Score =  136 bits (344), Expect = 5e-42
 Identities = 48/99 (48%), Positives = 73/99 (73%)

Query: 83  DVTEHELRAYDGSDPNKPLLMAIKGQIYDVSRSRMFYGPGGPYAMFAGRDASRALALMSF 142
           + T  +L  Y+G+D +KP+ +AIKG+++DV+  + FYG GG Y+MFAG+DASRAL  MS 
Sbjct: 4   EFTAEQLSQYNGTDESKPIYVAIKGRVFDVTTGKSFYGSGGDYSMFAGKDASRALGKMSK 63

Query: 143 DPQDLTGNIEGLSDSELEVLQDWEYKFMEKYVKVGQIVS 181
           + +D++ ++EGL++ E+  L DWE KF  KY  VG++VS
Sbjct: 64  NEEDVSPSLEGLTEKEINTLNDWETKFEAKYPVVGRVVS 102

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	203
1j03_A	102	Putative steroid binding protein; alpha and beta,	100.0
1x3x_A	82	Cytochrome B5; hemoprotein, porcine parasitic nama	99.4
1cyo_A	93	Cytochrome B5; electron transport; HET: HEM; 1.50A	99.38
2ibj_A	88	Cytochrome B5, CYTB5; FLY cytochrome B5, X-RAY dif	99.38
1cxy_A	90	Cytochrome B5; helix, beta-strand, electron transp	99.38
3ner_A	92	Cytochrome B5 type B; heme, electron transport; HE	99.36
3lf5_A	88	Cytochrome B5 reductase 4; NCB5OR, electron transf	99.36
1hko_A	104	Cytochrome B5; electron transfer protein, heme, el	99.3
2keo_A	112	Probable E3 ubiquitin-protein ligase HERC2; protei	99.27
1mj4_A	82	Sulfite oxidase; cytochrome B5, heme, oxidoreducta	99.13
1kbi_A	511	Cytochrome B2, L-LCR; flavocytochrome B2, electron	98.9
1sox_A	466	Sulfite oxidase; oxidoreductase, sulfite oxidation	98.4

>1j03_A Putative steroid binding protein; alpha and beta, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Arabidopsis thaliana} SCOP: d.120.1.2 PDB: 1t0g_A

Probab=100.00  E-value=1.5e-37  Score=238.54  Aligned_cols=100  Identities=48%  Similarity=0.905  Sum_probs=96.1

Q ss_pred             CCCCHHHHhhhcCCCCCCCeEEEEcCeEEecccccccccCCCcccccccCChhHHHhhhCCCCCCCCCCCCCCCHHHHHH
Q 028815           82 GDVTEHELRAYDGSDPNKPLLMAIKGQIYDVSRSRMFYGPGGPYAMFAGRDASRALALMSFDPQDLTGNIEGLSDSELEV  161 (203)
Q Consensus        82 ~~fT~eELa~ydG~~~~~piylAI~G~VYDVT~g~~fYgPGG~Y~~fAGrDaSrala~~sf~~e~l~~dl~~L~~~el~~  161 (203)
                      +.||.+||++|||.+++++|||||+|+|||||+++.||||||+|..|||||||++|++++|+++++++|+++|++.|++.
T Consensus         3 ~~~T~~El~~~ng~~~~~~~~vaI~G~VYDVT~~~~~~hPGG~~~~~AG~DaT~~f~~~~~~~~~l~~dl~~L~~~e~~~   82 (102)
T 1j03_A            3 MEFTAEQLSQYNGTDESKPIYVAIKGRVFDVTTGKSFYGSGGDYSMFAGKDASRALGKMSKNEEDVSPSLEGLTEKEINT   82 (102)
T ss_dssp             CCCCHHHHTTCBSCSSSCCBEEEETTEEEECGGGHHHHSSSSTTTTTTTSBCHHHHHHTCCCSSSCCSSCSSCCHHHHHH
T ss_pred             cccCHHHHHHhcCCCCCCCEEEEECCEEEECCCCccccCCCCcccccccchHHHHHHHcCCChhhccCcccCCCHHHHHH
Confidence            56999999999999867799999999999999998899999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHhhcCceeEEEec
Q 028815          162 LQDWEYKFMEKYVKVGQIVS  181 (203)
Q Consensus       162 L~~W~~~F~~KYp~VG~L~~  181 (203)
                      |++|+++|++||++||+|+.
T Consensus        83 l~~W~~~f~~kY~~VG~l~~  102 (102)
T 1j03_A           83 LNDWETKFEAKYPVVGRVVS  102 (102)
T ss_dssp             HHHHHHHHHTTSCEEECCCC
T ss_pred             HHHHHHHHhccCCeeeEEeC
Confidence            99999999999999999973

>1x3x_A Cytochrome B5; hemoprotein, porcine parasitic namatode, electron transport; HET: HEM; 1.80A {Ascaris suum}

Probab=99.40  E-value=1.7e-13  Score=100.28  Aligned_cols=54  Identities=22%  Similarity=0.284  Sum_probs=46.9

Q ss_pred             CCCCHHHHhhhcCCCCCCCeEEEEcCeEEecccccccccCCC-cccccccCChhHH--Hhh
Q 028815           82 GDVTEHELRAYDGSDPNKPLLMAIKGQIYDVSRSRMFYGPGG-PYAMFAGRDASRA--LAL  139 (203)
Q Consensus        82 ~~fT~eELa~ydG~~~~~piylAI~G~VYDVT~g~~fYgPGG-~Y~~fAGrDaSra--la~  139 (203)
                      +.||.+||++||+.+   .+||+|+|+|||||.... ++||| .+..+||+|||++  |..
T Consensus         4 ~~~t~~ev~~h~~~~---~~wv~i~g~VYDvT~f~~-~HPGG~~i~~~aG~D~T~~~~F~~   60 (82)
T 1x3x_A            4 KKYTKEEVAKHNTQN---DLWIIYDGEVHDMTSFYK-EHPGGKVILNKAGQDATSVLKTLA   60 (82)
T ss_dssp             CEECHHHHHTCEETT---EEEEEETTEEEECGGGGG-GCTTGGGGGGGTTSBCHHHHHHSH
T ss_pred             CccCHHHHHhhCCCC---CEEEEECCEEEECCcchh-hCcChhhhhhhCCCCCchhhhhhc
Confidence            469999999999987   499999999999998764 79999 4558999999999  654

>1cyo_A Cytochrome B5; electron transport; HET: HEM; 1.50A {Bos taurus} SCOP: d.120.1.1 PDB: 1bfx_A* 1i87_A 1i8c_A 1iet_A 1ieu_A 1do9_A* 1aqa_A* 1aw3_A* 1axx_A* 1b5a_A* 1b5b_A* 1blv_A* 1mny_A* 2axx_A* 1ib7_A* 1jex_A* 1ehb_A* 1nx7_A* 1u9u_A* 1m20_A* ...

Probab=99.38  E-value=1.4e-13  Score=103.17  Aligned_cols=54  Identities=22%  Similarity=0.294  Sum_probs=47.9

Q ss_pred             CCCCHHHHhhhcCCCCCCCeEEEEcCeEEecccccccccCCCc--ccccccCChhHHHhh
Q 028815           82 GDVTEHELRAYDGSDPNKPLLMAIKGQIYDVSRSRMFYGPGGP--YAMFAGRDASRALAL  139 (203)
Q Consensus        82 ~~fT~eELa~ydG~~~~~piylAI~G~VYDVT~g~~fYgPGG~--Y~~fAGrDaSrala~  139 (203)
                      +.||.+||++||+.+   +|||+|+|+|||||.... +||||.  ...+||+|||++|..
T Consensus         5 ~~~t~~Ev~~h~~~~---~~wv~i~g~VYDvT~f~~-~HPGG~~~i~~~aG~DaT~~f~~   60 (93)
T 1cyo_A            5 KYYTLEEIQKHNNSK---STWLILHYKVYDLTKFLE-EHPGGEEVLREQAGGDATENFED   60 (93)
T ss_dssp             CEECHHHHTTCEETT---EEEEEETTEEEECTTTTT-TCTTCSHHHHHHTTSBCHHHHHH
T ss_pred             CccCHHHHHhhCCCC---CEEEEECCEEEECCCcch-hCcChHHHHHHhcCccchHHHHH
Confidence            569999999999876   599999999999998764 799998  457899999999985

>2ibj_A Cytochrome B5, CYTB5; FLY cytochrome B5, X-RAY diffraction, heme, electron transport; HET: HEM; 1.55A {Musca domestica}

Probab=99.38  E-value=2e-13  Score=100.92  Aligned_cols=56  Identities=25%  Similarity=0.308  Sum_probs=48.4

Q ss_pred             cCCCCHHHHhhhcCCCCCCCeEEEEcCeEEecccccccccCCCcc--cccccCChhHHHhhh
Q 028815           81 LGDVTEHELRAYDGSDPNKPLLMAIKGQIYDVSRSRMFYGPGGPY--AMFAGRDASRALALM  140 (203)
Q Consensus        81 ~~~fT~eELa~ydG~~~~~piylAI~G~VYDVT~g~~fYgPGG~Y--~~fAGrDaSrala~~  140 (203)
                      .+.||.+||++||+.+   +|||+|+|+|||||.... ++|||..  ..+||+|||++|...
T Consensus         6 ~~~~t~~ev~~h~~~~---~~wv~i~g~VYDvT~f~~-~HPGG~~~i~~~aG~DaT~~f~~~   63 (88)
T 2ibj_A            6 VKYFTRAEVAKNNTKD---KNWFIIHNNVYDVTAFLN-EHPGGEEVLIEQAGKDATEHFEDV   63 (88)
T ss_dssp             CCEECHHHHHTSEETT---EEEEEETTEEEECGGGTT-TCTTCSHHHHTTTTEECHHHHHHH
T ss_pred             CCccCHHHHHHhCCCC---CEEEEECCEEEECCcchh-hCcCHHHHHHHhCCCcchHHHHHc
Confidence            3569999999999865   599999999999998754 7999984  579999999999853

>1cxy_A Cytochrome B5; helix, beta-strand, electron transport; HET: HEM; 1.65A {Ectothiorhodospira shaposhnikovii} SCOP: d.120.1.1

Probab=99.38  E-value=3.8e-13  Score=100.04  Aligned_cols=55  Identities=22%  Similarity=0.351  Sum_probs=48.6

Q ss_pred             CCCCHHHHhhhcCCCCCCCeEEEEcCeEEecccccccccCCCc--ccccccCChhHHHhhh
Q 028815           82 GDVTEHELRAYDGSDPNKPLLMAIKGQIYDVSRSRMFYGPGGP--YAMFAGRDASRALALM  140 (203)
Q Consensus        82 ~~fT~eELa~ydG~~~~~piylAI~G~VYDVT~g~~fYgPGG~--Y~~fAGrDaSrala~~  140 (203)
                      +.||.+||++|++.+   +|||+|+|+|||||.... ++|||.  ...+||||||++|...
T Consensus         8 ~~~t~~Ev~~h~~~~---~~wv~i~g~VYDvT~f~~-~HPGG~~~i~~~aG~DaT~~f~~~   64 (90)
T 1cxy_A            8 PVFTLEQVAEHHSPD---DCWMAIHGKVYDLTPYVP-NHPGPAGMMLVWCGQESTEAWETK   64 (90)
T ss_dssp             CBCCHHHHTTCEETT---EEEEEETTEEEECTTTGG-GCCSSTTTTGGGTTSBCHHHHHHT
T ss_pred             CCcCHHHHHHhcCCC---CEEEEECCEEEECccchh-hCcChHHHHHHHCCcchhHHHhhc
Confidence            469999999999976   599999999999998754 799997  5689999999999854

>3ner_A Cytochrome B5 type B; heme, electron transport; HET: HEM; 1.45A {Homo sapiens} SCOP: d.120.1.1 PDB: 1awp_A* 3mus_A* 1b5m_A* 1eue_A* 1icc_A* 1lj0_A* 2i89_A*

Probab=99.36  E-value=3.9e-13  Score=100.80  Aligned_cols=54  Identities=30%  Similarity=0.363  Sum_probs=48.0

Q ss_pred             CCCCHHHHhhhcCCCCCCCeEEEEcCeEEecccccccccCCCc--ccccccCChhHHHhh
Q 028815           82 GDVTEHELRAYDGSDPNKPLLMAIKGQIYDVSRSRMFYGPGGP--YAMFAGRDASRALAL  139 (203)
Q Consensus        82 ~~fT~eELa~ydG~~~~~piylAI~G~VYDVT~g~~fYgPGG~--Y~~fAGrDaSrala~  139 (203)
                      +.||.+||++||+.+   +|||+|+|+|||||.... ++|||.  ...+||+|||++|..
T Consensus        10 ~~~t~~Ev~~h~~~~---~~wv~i~g~VYDvT~f~~-~HPGG~~~l~~~aG~DaT~~F~~   65 (92)
T 3ner_A           10 TYYRLEEVAKRNSLK---ELWLVIHGRVYDVTRFLN-EHPGGEEVLLEQAGVDASESFED   65 (92)
T ss_dssp             CEECHHHHTTCEETT---EEEEEETTEEEECGGGTT-TCTTCSHHHHTTTTSBCHHHHHH
T ss_pred             CeeCHHHHHhhCCCC---CEEEEECCEEEEcccccc-cCCCHHHHHHHhcCCcchHHHHH
Confidence            569999999999976   599999999999998753 799997  458999999999985

>3lf5_A Cytochrome B5 reductase 4; NCB5OR, electron transfer, redox, heme, endoplasmic reticulu flavoprotein, iron, metal-binding, NAD, oxidoreductase; HET: HEM; 1.25A {Homo sapiens}

Probab=99.36  E-value=2.2e-13  Score=101.43  Aligned_cols=56  Identities=34%  Similarity=0.519  Sum_probs=48.9

Q ss_pred             cCCCCHHHHhhhcCCCCCCCeEEEEcCeEEecccccccccCCCc--ccccccCChhHHHhhh
Q 028815           81 LGDVTEHELRAYDGSDPNKPLLMAIKGQIYDVSRSRMFYGPGGP--YAMFAGRDASRALALM  140 (203)
Q Consensus        81 ~~~fT~eELa~ydG~~~~~piylAI~G~VYDVT~g~~fYgPGG~--Y~~fAGrDaSrala~~  140 (203)
                      ++.||.+||++||+.+   +|||+|+|+|||||.... ++|||.  ...+||+|||++|...
T Consensus         5 l~~~t~~Ev~~h~~~~---~~wv~i~g~VYDvT~f~~-~HPGG~~~l~~~aG~DaT~~F~~~   62 (88)
T 3lf5_A            5 LIEVTEEELKKHNKKD---DCWICIRGFVYNVSPYME-YHPGGEDELMRAAGSDGTELFDQV   62 (88)
T ss_dssp             SEEECHHHHHHCEETT---EEEEEETTEEEECGGGTT-TCTTCHHHHHTTTTEECHHHHHHH
T ss_pred             CCEeCHHHHHhhCCCC---CEEEEECCEEEECccchh-hCcChhhhhhhcCCCcchHHHHHH
Confidence            3569999999999986   599999999999999764 699997  5789999999999753

>1hko_A Cytochrome B5; electron transfer protein, heme, electron transport; HET: HEM; NMR {Bos taurus} SCOP: d.120.1.1 PDB: 2i96_A*

Probab=99.30  E-value=7e-13  Score=101.58  Aligned_cols=54  Identities=22%  Similarity=0.277  Sum_probs=47.7

Q ss_pred             CCCCHHHHhhhcCCCCCCCeEEEEcCeEEecccccccccCCCcc--cccccCChhHHHhh
Q 028815           82 GDVTEHELRAYDGSDPNKPLLMAIKGQIYDVSRSRMFYGPGGPY--AMFAGRDASRALAL  139 (203)
Q Consensus        82 ~~fT~eELa~ydG~~~~~piylAI~G~VYDVT~g~~fYgPGG~Y--~~fAGrDaSrala~  139 (203)
                      +.||.+||++||+.+   +|||+|+|+|||||.... +||||..  ..+||+|||++|..
T Consensus         9 ~~~t~~Ev~~h~~~~---~~wv~i~g~VYDvT~f~~-~HPGG~~~i~~~aGkDaT~~F~~   64 (104)
T 1hko_A            9 KYYTLEEIQKHNNSK---STWLILHYKVYDLTKFLE-EHPGGEEVLREQAGGDATENFED   64 (104)
T ss_dssp             EEECHHHHHHCBSSS---SBEEEETTEEEEHHHHSS-SSSSCSHHHHTTCSEECHHHHTT
T ss_pred             CccCHHHHHHhcCCC---CEEEEECCEEEECCcchh-hCcChHHHHHHhcCccchHHHHH
Confidence            569999999999976   499999999999998764 7999984  57999999999975

>2keo_A Probable E3 ubiquitin-protein ligase HERC2; protein of unknown function, HERC2 cytochrome domain, ligase binding, phosphoprotein; NMR {Homo sapiens}

Probab=99.27  E-value=8.8e-13  Score=102.56  Aligned_cols=55  Identities=24%  Similarity=0.312  Sum_probs=48.5

Q ss_pred             cCCCCHHHHhhhcCCCCCCCeEEEEcCeEEecccccccccCCCc--ccccccCChhHHHhh
Q 028815           81 LGDVTEHELRAYDGSDPNKPLLMAIKGQIYDVSRSRMFYGPGGP--YAMFAGRDASRALAL  139 (203)
Q Consensus        81 ~~~fT~eELa~ydG~~~~~piylAI~G~VYDVT~g~~fYgPGG~--Y~~fAGrDaSrala~  139 (203)
                      .+.||.+||++||+.+   +|||+|+|+|||||.... ++|||.  ...+||||||++|..
T Consensus        23 ~~~~t~~Ev~~h~~~~---d~wvvi~G~VYDVT~fl~-~HPGG~~~l~~~aGkDaT~~F~~   79 (112)
T 2keo_A           23 VTLVRIADLENHNNDG---GFWTVIDGKVYDIKDFQT-QSLTENSILAQFAGEDPVVALEA   79 (112)
T ss_dssp             CCEECHHHHHHHHHHT---CCEEEETTEEEEHHHHHH-HHTSTTSTTGGGTTSCHHHHHHH
T ss_pred             CCccCHHHHHHhcCCC---CEEEEECCEEEECCcchh-hCCCchhhhhhhCCccchHHHhH
Confidence            4579999999999976   499999999999998754 699997  568999999999986

>1mj4_A Sulfite oxidase; cytochrome B5, heme, oxidoreductase; HET: HEM; 1.20A {Homo sapiens} SCOP: d.120.1.1

Probab=99.13  E-value=1.2e-11  Score=90.55  Aligned_cols=54  Identities=19%  Similarity=0.321  Sum_probs=43.6

Q ss_pred             CCCCHHHHhhhcCCCCCCCeEEEEcCeEEecccccccccCCCcc--cccccCChhHHHhh
Q 028815           82 GDVTEHELRAYDGSDPNKPLLMAIKGQIYDVSRSRMFYGPGGPY--AMFAGRDASRALAL  139 (203)
Q Consensus        82 ~~fT~eELa~ydG~~~~~piylAI~G~VYDVT~g~~fYgPGG~Y--~~fAGrDaSrala~  139 (203)
                      +.||.+||++||+.+ + +|||+|+|+|||||.... ++|||..  -.+||+|+ .+|..
T Consensus         5 ~~~t~~ev~~h~~~~-~-~~wv~i~g~VYDvt~f~~-~HPGG~~~il~~aG~Dt-~~f~~   60 (82)
T 1mj4_A            5 HIYTKEEVSSHTSPE-T-GIWVTLGSEVFDVTEFVD-LHPGGPSKLMLAAGGPL-EPFWA   60 (82)
T ss_dssp             CBCCCC-CTTCEETT-T-EEEEEETTEEEECTTTGG-GSTTCHHHHHTTTTSBS-HHHHT
T ss_pred             CccCHHHHHHhcCCC-C-CeEEEECCEEEEchHHHH-hCCCHhHHHHHHcCCCh-HHHHh
Confidence            469999999999987 2 699999999999998754 7999953  36899995 56653

>1kbi_A Cytochrome B2, L-LCR; flavocytochrome B2, electron transfer, oxidoreductase; HET: HEM FMN; 2.30A {Saccharomyces cerevisiae} SCOP: c.1.4.1 d.120.1.1 PDB: 1fcb_A* 1lco_A* 1ldc_A* 1sze_A* 2oz0_A* 1szf_A* 1szg_A* 1ltd_A* 1kbj_A* 1qcw_A* 3ks0_A*

Probab=98.90  E-value=2.1e-09  Score=101.03  Aligned_cols=55  Identities=24%  Similarity=0.414  Sum_probs=48.3

Q ss_pred             CCCCHHHHhhhcCCCCCCCeEEEEcCeEEecccccccccCCCcc--cccccCChhHHHhhh
Q 028815           82 GDVTEHELRAYDGSDPNKPLLMAIKGQIYDVSRSRMFYGPGGPY--AMFAGRDASRALALM  140 (203)
Q Consensus        82 ~~fT~eELa~ydG~~~~~piylAI~G~VYDVT~g~~fYgPGG~Y--~~fAGrDaSrala~~  140 (203)
                      +.||.+||++||+.+   +|||+|+|+|||||.... +||||..  ..+||||||..|...
T Consensus         9 ~~~t~~ev~~h~~~~---~~wv~i~g~VYDvt~f~~-~HPGG~~~i~~~aG~DaT~~f~~~   65 (511)
T 1kbi_A            9 QKISPAEVAKHNKPD---DCWVVINGYVYDLTRFLP-NHPGGQDVIKFNAGKDVTAIFEPL   65 (511)
T ss_dssp             CCBCTTHHHHCEETT---EEEEEETTEEEECTTTGG-GCTTCHHHHHTTTTSBCHHHHGGG
T ss_pred             CccCHHHHHHhCCCC---CEEEEECCEEEECCcchh-hCcChHHHHHHHcCcchhhhhhhc
Confidence            569999999999986   499999999999998764 7999974  479999999999754

>1sox_A Sulfite oxidase; oxidoreductase, sulfite oxidation; HET: MTE HEM EPE; 1.90A {Gallus gallus} SCOP: b.1.18.6 d.120.1.1 d.176.1.1 PDB: 3hc2_A* 3hbq_A* 3hbg_A* 3hbp_A* 3r18_A* 3r19_A*

Probab=98.40  E-value=1.3e-07  Score=88.30  Aligned_cols=54  Identities=19%  Similarity=0.287  Sum_probs=45.5

Q ss_pred             CCCCHHHHhhhcCCCCCCCeEEEEcCeEEecccccccccCCCc--ccccccCChhHHHhh
Q 028815           82 GDVTEHELRAYDGSDPNKPLLMAIKGQIYDVSRSRMFYGPGGP--YAMFAGRDASRALAL  139 (203)
Q Consensus        82 ~~fT~eELa~ydG~~~~~piylAI~G~VYDVT~g~~fYgPGG~--Y~~fAGrDaSrala~  139 (203)
                      +.||.+|+++||..++  .|||+|+|+|||||.... .||||.  ...+||+| |.+|..
T Consensus         5 ~~~t~~Ev~~H~~~~d--~~Wvii~g~VYDvT~fl~-~HPGG~~~il~~aG~D-T~~f~~   60 (466)
T 1sox_A            5 PEYTREEVGRHRSPEE--RVWVTHGTDVFDVTDFVE-LHPGGPDKILLAAGGA-LEPFWA   60 (466)
T ss_dssp             CEECHHHHTTCEETTT--EEEEEETTEEEECTTTTT-TSTTCHHHHGGGTTSB-SHHHHH
T ss_pred             CeeCHHHHHHhcCCCC--ceEEEECCEEEechHhHh-hCcCCcccchhhcCCc-cccccc
Confidence            5699999999998762  499999999999998753 599993  56789999 888864

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	203
d1t0ga_	109	d.120.1.2 (A:) Putative steroid binding protein AT	1e-45
d1cyoa_	88	d.120.1.1 (A:) Cytochrome b5 {Cow (Bos taurus) [Ta	9e-04
d1soxa2	91	d.120.1.1 (A:3-93) Sulfite oxidase, N-terminal dom	0.002
d1mj4a_	80	d.120.1.1 (A:) Sulfite oxidase, N-terminal domain	0.004

>d1t0ga_ d.120.1.2 (A:) Putative steroid binding protein AT2G24940 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 109

class: Alpha and beta proteins (a+b)
fold: Cytochrome b5-like heme/steroid binding domain
superfamily: Cytochrome b5-like heme/steroid binding domain
family: Steroid-binding domain
domain: Putative steroid binding protein AT2G24940
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score =  144 bits (366), Expect = 1e-45
 Identities = 49/104 (47%), Positives = 74/104 (71%)

Query: 78  TVQLGDVTEHELRAYDGSDPNKPLLMAIKGQIYDVSRSRMFYGPGGPYAMFAGRDASRAL 137
              L + T  +L  Y+G+D +KP+ +AIKG+++DV+  + FYG GG Y+MFAG+DASRAL
Sbjct: 6   HHHLEEFTAEQLSQYNGTDESKPIYVAIKGRVFDVTTGKSFYGSGGDYSMFAGKDASRAL 65

Query: 138 ALMSFDPQDLTGNIEGLSDSELEVLQDWEYKFMEKYVKVGQIVS 181
             MS + +D++ ++EGL++ E+  L DWE KF  KY  VG++VS
Sbjct: 66  GKMSKNEEDVSPSLEGLTEKEINTLNDWETKFEAKYPVVGRVVS 109

>d1cyoa_ d.120.1.1 (A:) Cytochrome b5 {Cow (Bos taurus) [TaxId: 9913]} Length = 88

class: Alpha and beta proteins (a+b)
fold: Cytochrome b5-like heme/steroid binding domain
superfamily: Cytochrome b5-like heme/steroid binding domain
family: Cytochrome b5
domain: Cytochrome b5
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 34.8 bits (80), Expect = 9e-04
 Identities = 17/106 (16%), Positives = 41/106 (38%), Gaps = 27/106 (25%)

Query: 85  TEHELRAYDGSDPNKPLLMAIKGQIYDVSRSRMFYGPGGPYAM--FAGRDASRALALMSF 142
           T  E++ ++ S       + +  ++YD+++    + PGG   +   AG DA+       F
Sbjct: 8   TLEEIQKHNNSKS---TWLILHYKVYDLTKFLEEH-PGGEEVLREQAGGDATEN-----F 58

Query: 143 DPQDLTGNIEGLSDSELEVLQDWEYKFMEKYVKVGQIVSEQTSKPT 188
           +    + +                 +  + +  +G++  +  SK T
Sbjct: 59  EDVGHSTDA---------------RELSKTF-IIGELHPDDRSKIT 88

>d1soxa2 d.120.1.1 (A:3-93) Sulfite oxidase, N-terminal domain {Chicken (Gallus gallus) [TaxId: 9031]} Length = 91

class: Alpha and beta proteins (a+b)
fold: Cytochrome b5-like heme/steroid binding domain
superfamily: Cytochrome b5-like heme/steroid binding domain
family: Cytochrome b5
domain: Sulfite oxidase, N-terminal domain
species: Chicken (Gallus gallus) [TaxId: 9031]

 Score = 34.1 bits (78), Expect = 0.002
 Identities = 14/103 (13%), Positives = 34/103 (33%), Gaps = 22/103 (21%)

Query: 85  TEHELRAYDGSDPNKPLLMAIKGQIYDVSRSRMFYGPGGPYAM-FAGRDASRALALMSFD 143
           T  E+  +    P + + +     ++DV+     +  G    +  AG       AL +  
Sbjct: 6   TREEVGRHR--SPEERVWVTHGTDVFDVTDFVELHPGGPDKILLAAGGALEPFWALYAVH 63

Query: 144 PQDLTGNIEGLSDSELEVLQDWEYKFMEKYVKVGQIVSEQTSK 186
            +                      + +++Y KVG++  ++   
Sbjct: 64  GEPHV------------------LELLQQY-KVGELSPDEAPA 87

>d1mj4a_ d.120.1.1 (A:) Sulfite oxidase, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 80

class: Alpha and beta proteins (a+b)
fold: Cytochrome b5-like heme/steroid binding domain
superfamily: Cytochrome b5-like heme/steroid binding domain
family: Cytochrome b5
domain: Sulfite oxidase, N-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 32.9 bits (75), Expect = 0.004
 Identities = 9/55 (16%), Positives = 22/55 (40%), Gaps = 3/55 (5%)

Query: 85  TEHELRAYDGSDPNKPLLMAIKGQIYDVSRSRMFYGPGG-PYAMFAGRDASRALA 138
           T+ E+ ++    P   + + +  +++DV+     +  G     + AG       A
Sbjct: 6   TKEEVSSHTS--PETGIWVTLGSEVFDVTEFVDLHPGGPSKLMLAAGGPLEPFWA 58

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	203
d1t0ga_	109	Putative steroid binding protein AT2G24940 {Thale	100.0
d1cyoa_	88	Cytochrome b5 {Cow (Bos taurus) [TaxId: 9913]}	99.37
d1soxa2	91	Sulfite oxidase, N-terminal domain {Chicken (Gallu	99.36
d1euea_	86	Cytochrome b5 {Rat (Rattus norvegicus) [TaxId: 101	99.33
d1mj4a_	80	Sulfite oxidase, N-terminal domain {Human (Homo sa	99.31
d1cxya_	81	Cytochrome b558 {Ectothiorhodospira vacuolata [Tax	99.24
d1kbia2	97	Flavocytochrome b2, N-terminal domain {Baker's yea	99.22

>d1t0ga_ d.120.1.2 (A:) Putative steroid binding protein AT2G24940 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a+b)
fold: Cytochrome b5-like heme/steroid binding domain
superfamily: Cytochrome b5-like heme/steroid binding domain
family: Steroid-binding domain
domain: Putative steroid binding protein AT2G24940
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=100.00  E-value=1.7e-41  Score=262.45  Aligned_cols=102  Identities=48%  Similarity=0.913  Sum_probs=98.4

Q ss_pred             ccCCCCHHHHhhhcCCCCCCCeEEEEcCeEEecccccccccCCCcccccccCChhHHHhhhCCCCCCCCCCCCCCCHHHH
Q 028815           80 QLGDVTEHELRAYDGSDPNKPLLMAIKGQIYDVSRSRMFYGPGGPYAMFAGRDASRALALMSFDPQDLTGNIEGLSDSEL  159 (203)
Q Consensus        80 ~~~~fT~eELa~ydG~~~~~piylAI~G~VYDVT~g~~fYgPGG~Y~~fAGrDaSrala~~sf~~e~l~~dl~~L~~~el  159 (203)
                      .+++||++||++|||.++++||||||+|+|||||+++.||||||+|+.||||||||+|++++|+++++++|+++|+++|+
T Consensus         8 ~~~~fT~eeL~~ydG~~~~~piyvAi~G~VyDVt~~~~~ygpgg~Y~~faG~D~sral~~~~~~~e~~~~d~~~L~~~e~   87 (109)
T d1t0ga_           8 HLEEFTAEQLSQYNGTDESKPIYVAIKGRVFDVTTGKSFYGSGGDYSMFAGKDASRALGKMSKNEEDVSPSLEGLTEKEI   87 (109)
T ss_dssp             SSEEEEHHHHTTCSSCSSSCCCEEEETTEEEECGGGTTTSTTTCTTTTTTTEECHHHHHHTCCCTTTCCSCCTTSCHHHH
T ss_pred             hhhhCCHHHHHHcCCCCCCccEEEEECCEEEEccCCcceECCCCcccccccccHHHHHHhcCCChhhcCCcccCCCHHHH
Confidence            45789999999999998788999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHhhcCceeEEEec
Q 028815          160 EVLQDWEYKFMEKYVKVGQIVS  181 (203)
Q Consensus       160 ~~L~~W~~~F~~KYp~VG~L~~  181 (203)
                      +.|++|+++|++||++||+|+.
T Consensus        88 ~~L~~W~~~f~~kY~~VG~LV~  109 (109)
T d1t0ga_          88 NTLNDWETKFEAKYPVVGRVVS  109 (109)
T ss_dssp             HHHHHHHHHHHTTSCEEEEEEC
T ss_pred             HHHHHHHHHHhcCCCEEEEEeC
Confidence            9999999999999999999973

>d1cyoa_ d.120.1.1 (A:) Cytochrome b5 {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a+b)
fold: Cytochrome b5-like heme/steroid binding domain
superfamily: Cytochrome b5-like heme/steroid binding domain
family: Cytochrome b5
domain: Cytochrome b5
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.37  E-value=2.8e-13  Score=98.82  Aligned_cols=56  Identities=21%  Similarity=0.287  Sum_probs=47.9

Q ss_pred             cCCCCHHHHhhhcCCCCCCCeEEEEcCeEEecccccccccCCCcc--cccccCChhHHHhhh
Q 028815           81 LGDVTEHELRAYDGSDPNKPLLMAIKGQIYDVSRSRMFYGPGGPY--AMFAGRDASRALALM  140 (203)
Q Consensus        81 ~~~fT~eELa~ydG~~~~~piylAI~G~VYDVT~g~~fYgPGG~Y--~~fAGrDaSrala~~  140 (203)
                      .+.||.+||++||..+   .|||+|+|+|||||+... .+|||.-  ..+||+|+|..|...
T Consensus         4 ~k~yt~~Ev~~H~~~~---d~Wvii~g~VYDvT~f~~-~HPGG~~~i~~~aG~D~T~~F~~~   61 (88)
T d1cyoa_           4 VKYYTLEEIQKHNNSK---STWLILHYKVYDLTKFLE-EHPGGEEVLREQAGGDATENFEDV   61 (88)
T ss_dssp             CCEECHHHHTTCEETT---EEEEEETTEEEECTTTTT-TCTTCSHHHHHHTTSBCHHHHHHT
T ss_pred             cccccHHHHHhhCCCC---CeEEEECCEEEecchhhc-ccCCchHHHHHHcCCchHHHHHHH
Confidence            4679999999999876   499999999999998753 5999974  578999999999753

>d1soxa2 d.120.1.1 (A:3-93) Sulfite oxidase, N-terminal domain {Chicken (Gallus gallus) [TaxId: 9031]}

class: Alpha and beta proteins (a+b)
fold: Cytochrome b5-like heme/steroid binding domain
superfamily: Cytochrome b5-like heme/steroid binding domain
family: Cytochrome b5
domain: Sulfite oxidase, N-terminal domain
species: Chicken (Gallus gallus) [TaxId: 9031]

Probab=99.36  E-value=4.4e-13  Score=98.09  Aligned_cols=55  Identities=22%  Similarity=0.317  Sum_probs=47.3

Q ss_pred             CCCCHHHHhhhcCCCCCCCeEEEEcCeEEecccccccccCCCc--ccccccCChhHHHhh
Q 028815           82 GDVTEHELRAYDGSDPNKPLLMAIKGQIYDVSRSRMFYGPGGP--YAMFAGRDASRALAL  139 (203)
Q Consensus        82 ~~fT~eELa~ydG~~~~~piylAI~G~VYDVT~g~~fYgPGG~--Y~~fAGrDaSrala~  139 (203)
                      ..||.+||++||..++  .|||+|+|+|||||.... .+|||.  ...++|+|+|..|..
T Consensus         3 P~~T~~Ev~~H~~~~~--~~Wiii~g~VYDvT~f~~-~HPGG~~~i~~~~G~D~t~~~~~   59 (91)
T d1soxa2           3 PEYTREEVGRHRSPEE--RVWVTHGTDVFDVTDFVE-LHPGGPDKILLAAGGALEPFWAL   59 (91)
T ss_dssp             CEECHHHHTTCEETTT--EEEEEETTEEEECTTTTT-TSTTCHHHHGGGTTSBSHHHHHH
T ss_pred             CccCHHHHHHhCCCCC--ceEEEECCEEEeccceec-ccCCcHHHHHHHcCCcccHhHhh
Confidence            3699999999998762  599999999999998753 699995  578999999998764

>d1euea_ d.120.1.1 (A:) Cytochrome b5 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Cytochrome b5-like heme/steroid binding domain
superfamily: Cytochrome b5-like heme/steroid binding domain
family: Cytochrome b5
domain: Cytochrome b5
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.33  E-value=9.1e-13  Score=95.70  Aligned_cols=55  Identities=25%  Similarity=0.379  Sum_probs=47.4

Q ss_pred             CCCCHHHHhhhcCCCCCCCeEEEEcCeEEecccccccccCCCc--ccccccCChhHHHhhh
Q 028815           82 GDVTEHELRAYDGSDPNKPLLMAIKGQIYDVSRSRMFYGPGGP--YAMFAGRDASRALALM  140 (203)
Q Consensus        82 ~~fT~eELa~ydG~~~~~piylAI~G~VYDVT~g~~fYgPGG~--Y~~fAGrDaSrala~~  140 (203)
                      +.||.+||++||..+   .|||+|+|+|||||.... .+|||.  ...+||+|+|.+|...
T Consensus         5 ~~yt~~Ev~~H~~~~---d~Wvii~g~VYDvT~f~~-~HPGG~~~i~~~aG~D~T~~f~~~   61 (86)
T d1euea_           5 TYYRLEEVAKRNTAE---ETWMVIHGRVYDITRFLS-EHPGGEEILLEQAGADATESFEDI   61 (86)
T ss_dssp             CEECHHHHTTCEETT---EEEEEETTEEEECGGGGG-GCTTCSHHHHTTTTSBCHHHHHHH
T ss_pred             CEECHHHHHhhCCCC---CEEEEECCEEEecceeee-ccCcchHHHHHHCCcCHHHHHHHh
Confidence            569999999999876   499999999999998653 699996  4578999999999764

>d1mj4a_ d.120.1.1 (A:) Sulfite oxidase, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Cytochrome b5-like heme/steroid binding domain
superfamily: Cytochrome b5-like heme/steroid binding domain
family: Cytochrome b5
domain: Sulfite oxidase, N-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.31  E-value=3e-13  Score=96.74  Aligned_cols=55  Identities=22%  Similarity=0.344  Sum_probs=45.7

Q ss_pred             CCCCHHHHhhhcCCCCCCCeEEEEcCeEEecccccccccCCCc--ccccccCChhHHHhh
Q 028815           82 GDVTEHELRAYDGSDPNKPLLMAIKGQIYDVSRSRMFYGPGGP--YAMFAGRDASRALAL  139 (203)
Q Consensus        82 ~~fT~eELa~ydG~~~~~piylAI~G~VYDVT~g~~fYgPGG~--Y~~fAGrDaSrala~  139 (203)
                      +.||.+||++||+.++  .|||+|+|+|||||... -.+|||.  ...+||+|+|..|+.
T Consensus         3 ~v~T~~Ev~~H~~~~~--~~Wiii~g~VYDvT~f~-~~HPGG~~~i~~~~G~D~t~~~~~   59 (80)
T d1mj4a_           3 HIYTKEEVSSHTSPET--GIWVTLGSEVFDVTEFV-DLHPGGPSKLMLAAGGPLEPFWAL   59 (80)
T ss_dssp             CBCCCC-CTTCEETTT--EEEEEETTEEEECTTTG-GGSTTCHHHHHTTTTSBSHHHHTT
T ss_pred             ccccHHHHHHhCCCCC--CeEEEECCEEEeeeeeH-hhcCChhHHHHHHcCCCcchhhhc
Confidence            5699999999998762  49999999999999864 3699995  679999999987764

>d1cxya_ d.120.1.1 (A:) Cytochrome b558 {Ectothiorhodospira vacuolata [TaxId: 1054]}

class: Alpha and beta proteins (a+b)
fold: Cytochrome b5-like heme/steroid binding domain
superfamily: Cytochrome b5-like heme/steroid binding domain
family: Cytochrome b5
domain: Cytochrome b558
species: Ectothiorhodospira vacuolata [TaxId: 1054]

Probab=99.24  E-value=3.1e-12  Score=91.70  Aligned_cols=55  Identities=22%  Similarity=0.351  Sum_probs=47.4

Q ss_pred             CCCCHHHHhhhcCCCCCCCeEEEEcCeEEecccccccccCCCc--ccccccCChhHHHhhh
Q 028815           82 GDVTEHELRAYDGSDPNKPLLMAIKGQIYDVSRSRMFYGPGGP--YAMFAGRDASRALALM  140 (203)
Q Consensus        82 ~~fT~eELa~ydG~~~~~piylAI~G~VYDVT~g~~fYgPGG~--Y~~fAGrDaSrala~~  140 (203)
                      ..||.+||++||..+   .|||+|+|+|||||.... .+|||.  ...+||||||++|...
T Consensus         3 p~~t~~ev~~H~~~~---d~Wivi~g~VYDvT~f~~-~HPGG~~~l~~~aGkD~t~~F~~~   59 (81)
T d1cxya_           3 PVFTLEQVAEHHSPD---DCWMAIHGKVYDLTPYVP-NHPGPAGMMLVWCGQESTEAWETK   59 (81)
T ss_dssp             CBCCHHHHTTCEETT---EEEEEETTEEEECTTTGG-GCCSSTTTTGGGTTSBCHHHHHHT
T ss_pred             CccCHHHHHhhCCCC---CEEEEECCEEEeccceee-cCCCcHHHHHHHcCCcchHHHHhc
Confidence            369999999999876   399999999999998753 599985  5689999999999754

>d1kbia2 d.120.1.1 (A:1-97) Flavocytochrome b2, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Cytochrome b5-like heme/steroid binding domain
superfamily: Cytochrome b5-like heme/steroid binding domain
family: Cytochrome b5
domain: Flavocytochrome b2, N-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.22  E-value=4.9e-12  Score=93.80  Aligned_cols=58  Identities=22%  Similarity=0.398  Sum_probs=48.8

Q ss_pred             cccCCCCHHHHhhhcCCCCCCCeEEEEcCeEEecccccccccCCCc--ccccccCChhHHHhhh
Q 028815           79 VQLGDVTEHELRAYDGSDPNKPLLMAIKGQIYDVSRSRMFYGPGGP--YAMFAGRDASRALALM  140 (203)
Q Consensus        79 ~~~~~fT~eELa~ydG~~~~~piylAI~G~VYDVT~g~~fYgPGG~--Y~~fAGrDaSrala~~  140 (203)
                      +..+.||.+|+++||..+   .|||+|+|+|||||... ..+|||.  ...+||||||..|...
T Consensus         6 ~~~~~it~~EV~~H~~~~---d~Wvvi~g~VYDvT~f~-~~HPGG~~~i~~~aG~D~T~~f~~~   65 (97)
T d1kbia2           6 MNKQKISPAEVAKHNKPD---DCWVVINGYVYDLTRFL-PNHPGGQDVIKFNAGKDVTAIFEPL   65 (97)
T ss_dssp             SCSCCBCTTHHHHCEETT---EEEEEETTEEEECTTTG-GGCTTCHHHHHTTTTSBCHHHHGGG
T ss_pred             CCcCccCHHHHHHhCCCC---CEEEEECCEEEecchhh-hhCCChHHHHHHHcCccHHHHHHHH
Confidence            344679999999999765   49999999999999875 3799995  5789999999999743