Citrus Sinensis ID: 028862

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200--
Protein Sequence
MDSTGTNSNMEEYSAASTVIKFDKPIPLLRGPVPHDDPSSGSYLLAFRSHQSWASAYESCESKVLSQCEHGARIGCSVNASKKCKPPWWRNLIGQRPADFKEREDCEVREMEACLIVAKDKCAGFAKDRLLRPFQDARIAGRVGPKEVEKLVCWASLPETERSLWRDLIGSEWLGEREFRVRTNYRAADLLGSDNNYKRFLG
Secondary Structure (PSIPRED)
cccccccccccccccccEEEEcccccccccccccccccccccEEEEEccHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHcccccccccccEEEEEccccccHHHHHHHHccccccccccccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
cccccccccHHHccccEEEEEccccccEEcccccccccccccEEEEEccHHHHHHHHHHHHHHHHHHHHHHHccccEEHHHHcccccHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccEccccccccccEEEEEEcccccccHHHHHHHccccccccccccEEcccHHHHcccccccHHHcc
Coil and Loop (DISEMBL)
mdstgtnsnmeeysaastvikfdkpipllrgpvphddpssgsyLLAFRSHQSWASAYESCESKVLSqcehgarigcsvnaskkckppwwrnligqrpadfkeredCEVREMEACLIVAKDKCagfakdrllrpfqdariagrvgpkEVEKLVCWASLPETERSLWRDLigsewlgerEFRVRTNYRaadllgsdnnykrflg
Flexible Loop (DISEMBL)
mdstgtnsnmeeYSAASTVIKFDKPIPLLRGPVPHDDPSSGSYLLAFRSHQSWASAYESCESKVLSQCEHGARIgcsvnaskkckppwwrnligqrpadfKEREDCEVREMEACLIVAKDKCAGFAKDRLLRPFQdariagrvgpkevEKLVCwaslpeterslwrdligsewlgerefrvrtnyraadllgsdnnykrflg
Low Complexity Region (SEG)
MDSTGTNSNMEEYSAASTVIKFDKPIPLLRGPVPHDDPSSGSYLLAFRSHQSWASAYESCESKVLSQCEHGARIGCSVNASKKCKPPWWRNLIGQRPADFKEREDCEVREMEACLIVAKDKCAGFAKDRLLRPFQDARIAGRVGPKEVEKLVCWASLPETERSLWRDLIGSEWLGEREFRVRTNYRAADLLGSDNNYKRFLG
Disordered region (IsUnstruct)
******************VIKFD**I****************YLLAFRSHQSWASAYESCESKVLSQCEHGARIGCSVNASKKCKPPWWRNLIGQRPADFKEREDCEVREMEACLIVAKDKCAGFAKDRLLRPFQDARIAGRVGPKEVEKLVCWASLPETERSLWRDLIGSEWLGEREFRVRTNYRAADLLG**********
Disordered Region (DISOPRED)
**************AASTVIKFDKPIPLLRGPVP****SSGSYLLAFRSHQSWASAYESCESKVLSQCEHGARIGCSVNASKKCKPPWWRNLIGQ**************EMEACLIVAKDKCAGFAKDRLLRPFQDARIAGRVGPKEVEKLVCWASLPETERSLWRDLIGSEWLGEREFRVRTNYRAADLLGSDNNYKRFLG
Disordered Region (DISEMBL)
*************SAASTVIKFDKPIPLLRGPVPHDDPSSGSYLLAFRSHQSWASAYESCESKVLSQCEHGARIGCSVNASKKCKPPWWRNLIGQRPADFKEREDCEVREMEACLIVAKDKCAGFAKDRLLRPFQDARIAGRVGPKEVEKLVCWASLPETERSLWRDLIGSEWLGEREFRVRTNYRAADLLGSDNNYKRFLG
Disordered Region (DISPRO)
*********MEEYSAASTVIKFDKPIPLLRGPVPHDDPSSGSYLLAFRSHQSWASAYESCESKVLSQCEHGARIGCSVNASKKCKPPWWRNLIGQRPADFKEREDCEVREMEACLIVAKDKCAGFAKDRLLRPFQDARIAGRVGPKEVEKLVCWASLPETERSLWRDLIGSEWLGEREFRVRTNYRAADLLGSDNNYKRFLG
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MDSTGTNSNMEEYSAASTVIKFDKPIPLLRGPVPHDDPSSGSYLLAFRSHQSWASAYESCESKVLSQCEHGARIGCSVNASKKCKPPWWRNLIGQRPADFKEREDCEVREMEACLIVAKDKCAGFAKDRLLRPFQDARIAGRVGPKEVEKLVCWASLPETERSLWRDLIGSEWLGEREFRVRTNYRAADLLGSDNNYKRFLG
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	202
255559869	202	conserved hypothetical protein [Ricinus	0.930	0.930	0.558	7e-53
224062315	201	predicted protein [Populus trichocarpa]	0.925	0.930	0.563	2e-52
356570604	156	PREDICTED: uncharacterized protein LOC10	0.693	0.897	0.583	8e-43
449455252	162	PREDICTED: uncharacterized protein LOC10	0.693	0.864	0.582	4e-41
225437166	208	PREDICTED: uncharacterized protein LOC10	0.935	0.908	0.482	7e-41
297821264	173	hypothetical protein ARALYDRAFT_324763 [	0.801	0.936	0.502	7e-41
449530293	151	PREDICTED: uncharacterized LOC101205543	0.658	0.880	0.591	8e-41
18412754	175	uncharacterized protein [Arabidopsis tha	0.777	0.897	0.545	3e-34
7573322	174	putative protein [Arabidopsis thaliana]	0.777	0.902	0.545	3e-34
110736892	167	hypothetical protein [Arabidopsis thalia	0.762	0.922	0.555	3e-33

>gi|255559869|ref|XP_002520953.1| conserved hypothetical protein [Ricinus communis] gi|223539790|gb|EEF41370.1| conserved hypothetical protein [Ricinus communis]

 Score =  212 bits (539), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 110/197 (55%), Positives = 144/197 (73%), Gaps = 9/197 (4%)

Query: 9   NMEEYSAASTVIKFDKPIPLLRGPVP---HDDPSSGSYLLAFRSHQSWASAYESCESKVL 65
           +++EYSA++T I+FD  IPLLRGP+P    DDPSSG Y LAFR+ QSWA+AY+  ESK++
Sbjct: 8   DLDEYSASATTIEFDFQIPLLRGPIPAAESDDPSSGPYFLAFRNPQSWATAYKLSESKII 67

Query: 66  SQCEHGARIGCSVNASKKCKPPWWRNLIGQRPADFKEREDCEVREMEACLIVAKDKCAGF 125
           SQCE GARIGC+++AS+KCKPPWWRNLIG + AD KE+E+CE REME CL+ AK+KC GF
Sbjct: 68  SQCEGGARIGCAISASQKCKPPWWRNLIGWKVADLKEKENCEEREMEGCLVAAKEKCVGF 127

Query: 126 AKDRLLRPFQDARIAGRVGPKEVEK-LVCWASLPETERSLWRDLIGSEWLGEREFRVRTN 184
           AK++  RPF +ARIA  VG +EV K L+C  S+PE     W  L+G +   +  F + TN
Sbjct: 128 AKEKCFRPFSEARIA--VGKEEVVKRLMCLVSVPEKTGIKWFRLMGID--DKCRFGI-TN 182

Query: 185 YRAADLLGSDNNYKRFL 201
            +A++LL  D  Y  F 
Sbjct: 183 QKASELLAFDPKYTWFF 199

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224062315|ref|XP_002300815.1| predicted protein [Populus trichocarpa] gi|222842541|gb|EEE80088.1| predicted protein [Populus trichocarpa]

 Score =  211 bits (537), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 111/197 (56%), Positives = 140/197 (71%), Gaps = 10/197 (5%)

Query: 9   NMEEYSAASTVIKFDKPIPLLRGPVPH---DDPSSGSYLLAFRSHQSWASAYESCESKVL 65
           N++EYSA++T IKFD+PIPLLRGP+P    DDPS   ++LAFRS QSWA AY++CESK++
Sbjct: 8   NLDEYSASATTIKFDRPIPLLRGPIPAGPPDDPSISPHVLAFRSPQSWAVAYKTCESKII 67

Query: 66  SQCEHGARIGCSVNASKKCKPPWWRNLI-GQRPADFKEREDCEVREMEACLIVAKDKCAG 124
           SQCE GAR GC++ AS KCKPPWWR  I G R  D KERE CE RE+E CL+ AKDKC G
Sbjct: 68  SQCEEGARFGCAITASNKCKPPWWRGFIGGARLEDLKERERCEDRELEGCLVAAKDKCVG 127

Query: 125 FAKDRLLRPFQDARIAGRVGPKEVEKLVCWASLPETERSLWRDLIGSEWLGEREFRVRTN 184
           FAK++  +PF+DARIA R   + V  LV   S+P+   S W  LIG    G+  F V TN
Sbjct: 128 FAKEKCWKPFRDARIAVR-EEEVVRNLVSLVSVPQ-RSSKWISLIG---FGKFNFGV-TN 181

Query: 185 YRAADLLGSDNNYKRFL 201
           +RA++ LGS+ N+  F 
Sbjct: 182 FRASEFLGSNKNHAWFF 198

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356570604|ref|XP_003553475.1| PREDICTED: uncharacterized protein LOC100790558 [Glycine max]

 Score =  179 bits (453), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 84/144 (58%), Positives = 113/144 (78%), Gaps = 4/144 (2%)

Query: 1   MDSTGTNSNMEEYSAASTVIKFDKPIPLLRGPVP---HDDPSSGSYLLAFRSHQSWASAY 57
           MD++  + N+++YS +STVIKFD+P+PLLRGP+P    DDPS+G Y+LAFR  ++WAS++
Sbjct: 1   MDASEPD-NVDDYSPSSTVIKFDRPVPLLRGPLPAGPSDDPSAGPYVLAFRDSRAWASSF 59

Query: 58  ESCESKVLSQCEHGARIGCSVNASKKCKPPWWRNLIGQRPADFKEREDCEVREMEACLIV 117
            +CE K++ QCE GARIGC+V+AS+KCK PWW++L G   +D KERE CEVREM  C   
Sbjct: 60  AACERKIVEQCEEGARIGCAVSASRKCKLPWWKSLAGPTLSDLKEREQCEVREMADCEAA 119

Query: 118 AKDKCAGFAKDRLLRPFQDARIAG 141
           AK+KC GFA+D+ L PF+DARI G
Sbjct: 120 AKEKCVGFARDKCLVPFRDARIRG 143

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449455252|ref|XP_004145367.1| PREDICTED: uncharacterized protein LOC101218153 [Cucumis sativus] gi|449472029|ref|XP_004153474.1| PREDICTED: uncharacterized protein LOC101205543 [Cucumis sativus]

 Score =  173 bits (438), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 85/146 (58%), Positives = 107/146 (73%), Gaps = 6/146 (4%)

Query: 9   NMEEYSAASTVIKFDKPIPLLRGPV---PHDDPSSGSYLLAFRSHQSWASAYESCESKVL 65
           N  EYS++ST+I F +PIPLLRGPV     ++PS+G YLLAFR  Q+W SA+ +CESK++
Sbjct: 19  NPHEYSSSSTIITFQRPIPLLRGPVRASQSENPSAGPYLLAFRDRQAWESAFRACESKII 78

Query: 66  SQCEHGARIGCSVNASKKCKPPWWRNLI-GQRPADFKEREDCEVREMEACLIVAKDKCAG 124
            QCE GARIGCS+ AS KCKPPWW  L+  ++  D KERE CE  EMEACL VAK+KC G
Sbjct: 79  EQCEVGARIGCSITASNKCKPPWWGFLLRSKKGLDLKEREQCEELEMEACLAVAKEKCVG 138

Query: 125 FAKDRLLRPFQDARIAGRVGPKEVEK 150
           FAK++  +PF +AR+ G  G K  EK
Sbjct: 139 FAKEKCYKPFMEARVVG--GRKLTEK 162

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225437166|ref|XP_002274823.1| PREDICTED: uncharacterized protein LOC100254442 [Vitis vinifera] gi|296084494|emb|CBI25053.3| unnamed protein product [Vitis vinifera]

 Score =  172 bits (436), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 96/199 (48%), Positives = 134/199 (67%), Gaps = 10/199 (5%)

Query: 6   TNSNMEEYSAASTVIKFDKPIPLLRGPVP---HDDPSSGSYLLAFRSHQSWASAYESCES 62
           T +++ +YS ++T+  FD P+PLLRGPVP    DDPS+G ++LAFR  ++W SA+++CES
Sbjct: 3   TPTDLSDYSPSATITPFDCPVPLLRGPVPASPSDDPSAGPFVLAFRDSRAWRSAFKACES 62

Query: 63  KVLSQCEHGARIGCSVNASKKCKPPWWRNLIGQRPADFKEREDCEVREMEACLIVAKDKC 122
           K++ QCE GARIGC+V+AS KC PPWW  LIG+ P    ERE+CE REM AC+  +K+KC
Sbjct: 63  KIIEQCEAGARIGCAVSASSKCGPPWWWALIGRSPPSLAEREECEEREMAACVAASKEKC 122

Query: 123 AGFAKDRLLRPFQDARIA------GRVGPKEVEKLVCWASLPETERSLWRDLIGSEWLGE 176
             FAKD+ L PF+DARIA       R   +E  +L+ WAS+     S+  + +GS W+  
Sbjct: 123 VKFAKDKCLGPFRDARIAVNGRDLTRKKKREAVELIFWASMGGRRNSIGLENLGS-WVLS 181

Query: 177 REFRVRTNYRAADLLGSDN 195
           +     TNYR +DLL + N
Sbjct: 182 KCKLGETNYRGSDLLDTQN 200

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297821264|ref|XP_002878515.1| hypothetical protein ARALYDRAFT_324763 [Arabidopsis lyrata subsp. lyrata] gi|297324353|gb|EFH54774.1| hypothetical protein ARALYDRAFT_324763 [Arabidopsis lyrata subsp. lyrata]

 Score =  172 bits (436), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 91/181 (50%), Positives = 118/181 (65%), Gaps = 19/181 (10%)

Query: 11  EEYSAASTVIKFDKPIPLLRGPVPHDDPSSGSYLLAFRSHQSWASAYESCESKVLSQCEH 70
           ++YSAA+T + F++PIPLLRGPVP    S GSY+LAFRS  SW++A++ CE+ +  QC+ 
Sbjct: 5   DDYSAAATTVVFERPIPLLRGPVP----SGGSYVLAFRSLDSWSAAFKRCETLIKDQCQE 60

Query: 71  GARIGCSVNASKKCKPPWWRNLIGQRPADFKEREDCEVREMEACLIVAKDKCAGFAKDRL 130
           GARIGC+V+AS  CKPPWWR        D +ER+ CE RE +AC+  +K KCA FAKD+ 
Sbjct: 61  GARIGCAVSASNNCKPPWWRG-----SGDMRERDKCEEREFQACVAASKGKCAAFAKDKC 115

Query: 131 LRPFQDARIAGRVGPKEVEKLVCWASLPETERSLWRDLIGSEWLGEREFRVRTNYRAADL 190
              F DARI+     KEVE +VC AS+PE  R  WRDL+G   +G           A DL
Sbjct: 116 SGAFLDARIS-----KEVEGMVCLASMPEHSR--WRDLMG---IGSLHLHTNNCCTARDL 165

Query: 191 L 191
           L
Sbjct: 166 L 166

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449530293|ref|XP_004172130.1| PREDICTED: uncharacterized LOC101205543 [Cucumis sativus]

 Score =  172 bits (436), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 81/137 (59%), Positives = 103/137 (75%), Gaps = 4/137 (2%)

Query: 9   NMEEYSAASTVIKFDKPIPLLRGPV---PHDDPSSGSYLLAFRSHQSWASAYESCESKVL 65
           N  EYS++ST+I F +PIPLLRGPV     ++PS+G YLLAFR  Q+W SA+ +CESK++
Sbjct: 8   NPHEYSSSSTIITFQRPIPLLRGPVRASQSENPSAGPYLLAFRDRQAWESAFRACESKII 67

Query: 66  SQCEHGARIGCSVNASKKCKPPWWRNLI-GQRPADFKEREDCEVREMEACLIVAKDKCAG 124
            QCE GARIGCS+ AS KCKPPWW  L+  ++  D KERE CE  EMEACL VAK+KC G
Sbjct: 68  EQCEVGARIGCSITASNKCKPPWWGFLLRSKKGLDLKEREQCEELEMEACLAVAKEKCVG 127

Query: 125 FAKDRLLRPFQDARIAG 141
           FAK++  +PF +AR+ G
Sbjct: 128 FAKEKCYKPFMEARVVG 144

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|18412754|ref|NP_567146.1| uncharacterized protein [Arabidopsis thaliana] gi|98960925|gb|ABF58946.1| At3g63390 [Arabidopsis thaliana] gi|332646953|gb|AEE80474.1| uncharacterized protein [Arabidopsis thaliana]

 Score =  150 bits (379), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 95/174 (54%), Positives = 117/174 (67%), Gaps = 17/174 (9%)

Query: 11  EEYSAASTVIKFDKPIPLLRGPVPHDDPSSGSYLLAFRSHQSWASAYESCESKVLSQCEH 70
           +++SAA+T + FD+PIPLLRGPVP    S GSY+LAFRS  SW++A++ CE+ +  QCE 
Sbjct: 6   DDFSAAATTVVFDRPIPLLRGPVP----SGGSYVLAFRSLDSWSAAFKRCETLIKDQCEE 61

Query: 71  GARIGCSVNASKKCKPPWWRNLIGQRPADFKEREDCEVREMEACLIVAKDKCAGFAKDRL 130
           GA+IGC+V+AS  CKPPWWR   G    D +ERE CE RE E C+  AK KCA FAKD+ 
Sbjct: 62  GAKIGCAVSASNNCKPPWWRGSGG----DMREREKCEEREFEGCVAAAKGKCAAFAKDKC 117

Query: 131 LRPFQDARIAGRVGPKEVEKLVCWASLPETERSLWRDLIGSEWLGEREFRVRTN 184
              F DARIA     KEVE LV  AS+PE  R  WRDL+G   LG    R+ TN
Sbjct: 118 SGAFLDARIAKD---KEVEGLVWLASMPEESR--WRDLMG---LGG-SLRLHTN 162

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|7573322|emb|CAB87792.1| putative protein [Arabidopsis thaliana] gi|21554112|gb|AAM63192.1| unknown [Arabidopsis thaliana]

 Score =  150 bits (378), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 95/174 (54%), Positives = 117/174 (67%), Gaps = 17/174 (9%)

Query: 11  EEYSAASTVIKFDKPIPLLRGPVPHDDPSSGSYLLAFRSHQSWASAYESCESKVLSQCEH 70
           +++SAA+T + FD+PIPLLRGPVP    S GSY+LAFRS  SW++A++ CE+ +  QCE 
Sbjct: 5   DDFSAAATTVVFDRPIPLLRGPVP----SGGSYVLAFRSLDSWSAAFKRCETLIKDQCEE 60

Query: 71  GARIGCSVNASKKCKPPWWRNLIGQRPADFKEREDCEVREMEACLIVAKDKCAGFAKDRL 130
           GA+IGC+V+AS  CKPPWWR   G    D +ERE CE RE E C+  AK KCA FAKD+ 
Sbjct: 61  GAKIGCAVSASNNCKPPWWRGSGG----DMREREKCEEREFEGCVAAAKGKCAAFAKDKC 116

Query: 131 LRPFQDARIAGRVGPKEVEKLVCWASLPETERSLWRDLIGSEWLGEREFRVRTN 184
              F DARIA     KEVE LV  AS+PE  R  WRDL+G   LG    R+ TN
Sbjct: 117 SGAFLDARIAKD---KEVEGLVWLASMPEESR--WRDLMG---LGG-SLRLHTN 161

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|110736892|dbj|BAF00403.1| hypothetical protein [Arabidopsis thaliana]

 Score =  147 bits (370), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 95/171 (55%), Positives = 114/171 (66%), Gaps = 17/171 (9%)

Query: 14  SAASTVIKFDKPIPLLRGPVPHDDPSSGSYLLAFRSHQSWASAYESCESKVLSQCEHGAR 73
           SAA+T + FD+PIPLLRGPVP    S GSY+LAFRS  SW++A++ CE+ +  QCE GA+
Sbjct: 1   SAAATTVVFDRPIPLLRGPVP----SGGSYVLAFRSLDSWSAAFKRCETLIKDQCEEGAK 56

Query: 74  IGCSVNASKKCKPPWWRNLIGQRPADFKEREDCEVREMEACLIVAKDKCAGFAKDRLLRP 133
           IGC+V+AS  CKPPWWR   G    D +ERE CE RE E C+  AK KCA FAKD+    
Sbjct: 57  IGCAVSASNNCKPPWWRGSGG----DMREREKCEEREFEGCVAAAKGKCAAFAKDKCSGA 112

Query: 134 FQDARIAGRVGPKEVEKLVCWASLPETERSLWRDLIGSEWLGEREFRVRTN 184
           F DARIA     KEVE LV  AS+PE  R  WRDL+G   LG    R+ TN
Sbjct: 113 FLDARIAKD---KEVEGLVWLASMPEESR--WRDLMG---LGG-SLRLHTN 154

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	202
TAIR|locus:2087373	175	AT3G63390 [Arabidopsis thalian	0.811	0.937	0.538	1.9e-42

TAIR|locus:2087373 AT3G63390 [Arabidopsis thaliana (taxid:3702)]

 Score = 449 (163.1 bits), Expect = 1.9e-42, P = 1.9e-42
 Identities = 99/184 (53%), Positives = 121/184 (65%)

Query:    11 EEYSAASTVIKFDKPIPLLRGPVPHDDPSSGSYLLAFRSHQSWASAYESCESKVLSQCEH 70
             +++SAA+T + FD+PIPLLRGPVP    S GSY+LAFRS  SW++A++ CE+ +  QCE 
Sbjct:     6 DDFSAAATTVVFDRPIPLLRGPVP----SGGSYVLAFRSLDSWSAAFKRCETLIKDQCEE 61

Query:    71 GARIGCSVNASKKCKPPWWRNLIGQRPADFKEREDCEVREMEACLIVAKDKCAGFAKDRL 130
             GA+IGC+V+AS  CKPPWWR   G    D +ERE CE RE E C+  AK KCA FAKD+ 
Sbjct:    62 GAKIGCAVSASNNCKPPWWRGSGG----DMREREKCEEREFEGCVAAAKGKCAAFAKDKC 117

Query:   131 LRPFQDARIAGRVGPKEVEKLVCWASLPETERSLWRDLIGSEWLGEREFRVRTNY---RA 187
                F DARIA     KEVE LV  AS+PE  R  WRDL+G   LG    R+ TN     A
Sbjct:   118 SGAFLDARIAK---DKEVEGLVWLASMPEESR--WRDLMG---LGG-SLRLHTNNCCCTA 168

Query:   188 ADLL 191
              DLL
Sbjct:   169 RDLL 172


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.318   0.134   0.425    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      202       202   0.00090  111 3  11 22  0.50    32
                                                     31  0.46    35


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  1
  No. of states in DFA:  612 (65 KB)
  Total size of DFA:  202 KB (2113 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  18.34u 0.15s 18.49t   Elapsed:  00:00:01
  Total cpu time:  18.34u 0.15s 18.49t   Elapsed:  00:00:01
  Start:  Thu May  9 18:26:07 2013   End:  Thu May  9 18:26:08 2013

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0009536 "plastid" evidence=IDA

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Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

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Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: eugene3.00020435 hypothetical protein (201 aa) (Populus trichocarpa)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

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Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

No hit with probability above 80.00

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Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00