Citrus Sinensis ID: 028937

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-
Protein Sequence
MNSLTAKPCFIYQPPSSSVTVVSCRPKLFSSVRCPIKTKKNNNGRLALRIQAYDSSKNESNNNGSNDSKPPNGALPKGRRDILLEYVKNVQPEFMELFVKRAPEQVVDAMRQTVTNMIGTLPPQFFAVTVTTVAENLAQLMYSVMMTGYMFKNAQYRLELQQSLEQVALPEVLDKKVFLLLLHLLLLSFVIVTLLAYLHKC
Secondary Structure (PSIPRED)
cccccccccccccccccccccccccccccccccccccccccccccccHHEEccccccccccccccccccccccccccccccHHHHHHHHccHHHHHHHHccccHHHHHHHHHHHHHHHcccccccEEEEEEEcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Secondary Structure Prediction (SSPRO)
cccccccccHccccccccccccccccccccccccccccccccccEEEEEEEEcccccccccccccccccccccccccccccHHHHHHHHccHHHHHHHHccccHHHHHHHHHHHHHHHcccccHccEEEEEEcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHcc
Coil and Loop (DISEMBL)
mnsltakpcfiyqppsssvtvvscrpklfssvrcpiktkknnngrLALRIQAYdssknesnnngsndskppngalpkgrRDILLEYVKNVQPEFMELFVKRAPEQVVDAMRQTVTNmigtlppqfFAVTVTTVAENLAQLMYSVMMTGYMFKNAQYRLELQQSLEQVALPEVLDKKVFLLLLHLLLLSFVIVTLLAYLHKC
Flexible Loop (DISEMBL)
mnsltakpcfiyqppsssvtvvsCRPKlfssvrcpiktkknnngrlaLRIQAYDSsknesnnngsndskppngalPKGRRDILLEYVKNVQPEFMELFVKRAPEQVVDAMRQTVTNMIGTLPPQFFAVTVTTVAENLAQLMYSVMMTGYMFKNAQYRLELQQSLEQVALPEVLDKKVFLLLLHLLLLSFVIVTLLAYLHKC
Low Complexity Region (SEG)
MNSLTAKPCFIYQPPSSSVTVVSCRPKLFSSVRCPIKTKKNNNGRLALRIQAYdssknesnnngsndskPPNGALPKGRRDILLEYVKNVQPEFMELFVKRAPEQVVDAMRQTVTNMIGTLPPQFFAVTVTTVAENLAQLMYSVMMTGYMFKNAQYRLELQQSLEQVALPEvldkkvfllllhllllsfvivtllAYLHKC
Disordered region (IsUnstruct)
********CFIYQPPSSSVTVVSCRPKLFSSVRCPIKT********AL********************************DILLEYVKNVQPEFMELFVKRAPEQVVDAMRQTVTNMIGTLPPQFFAVTVTTVAENLAQLMYSVMMTGYMFKNAQYRLELQQSLEQVALPEVLDKKVFLLLLHLLLLSFVIVTLLAYLH**
Disordered Region (DISOPRED)
**********************************************************************************LLEYVKNVQPEFME*F*****EQVVDAMRQTVTNMIGTLPPQFFAVTVTTVAENLAQLMYSVMMTGYMFKNAQYRLEL*****************FLLLLHLLLLSFVIVTLLAYLHKC
Disordered Region (DISEMBL)
MNSLTAKPCFIYQPPSSSVTVVSCRPKLFSSVRCPIKTKKNNNGRLALRIQAYDS**************PPNGALPKGRRDILLEYVKNVQPEFMELFVKRAPEQVVDAMRQTVTNMIGTLPPQFFAVTVTTVAENLAQLMYSVMMTGYMFKNAQYRLELQQSLEQVALPEVLDKKVFLLLLHLLLLSFVIVTLLAYLHKC
Disordered Region (DISPRO)
********C******SSSVTV********SSVRCPIKTKKNNNGRLALRIQAYDS************************RDILLEYVKNVQPEFMELFVKRAPEQVVDAMRQTVTNMIGTLPPQFFAVTVTTVAENLAQLMYSVMMTGYMFKNAQYRLELQQSLEQVALPEVLDKKVFLLLLHLLLLSFVIVTLLAYLHKC
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHii
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooo
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHiii
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MNSLTAKPCFIYQPPSSSVTVVSCRPKLFSSVRCPIKTKKNNNGRLALRIQAYDSSKNESNNNGSNDSKPPNGALPKGRRDILLEYVKNVQPEFMELFVKRAPEQVVDAMRQTVTNMIGTLPPQFFAVTVTTVAENLAQLMYSVMMTGYMFKNAQYRLELQQSLEQVALPEVLDKKVFLLLLHLLLLSFVIVTLLAYLHKC
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	201
225459864	333	PREDICTED: uncharacterized protein LOC10	0.756	0.456	0.783	2e-61
358248580	345	uncharacterized protein LOC100815202 [Gl	0.721	0.420	0.766	5e-58
356517424	341	PREDICTED: uncharacterized protein LOC10	0.661	0.390	0.829	5e-58
449452967	331	PREDICTED: uncharacterized protein LOC10	0.676	0.410	0.810	2e-57
388491314	341	unknown [Lotus japonicus]	0.661	0.390	0.794	2e-56
118487779	343	unknown [Populus trichocarpa]	0.761	0.446	0.769	7e-55
255539126	348	conserved hypothetical protein [Ricinus	0.766	0.442	0.773	5e-54
224083247	308	predicted protein [Populus trichocarpa]	0.731	0.477	0.78	5e-53
224065695	340	predicted protein [Populus trichocarpa]	0.756	0.447	0.735	3e-51
6633836	222	F2K11.3 [Arabidopsis thaliana]	0.830	0.752	0.633	2e-48

>gi|225459864|ref|XP_002285932.1| PREDICTED: uncharacterized protein LOC100247161 [Vitis vinifera] gi|302141665|emb|CBI18868.3| unnamed protein product [Vitis vinifera]

 Score =  241 bits (614), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 123/157 (78%), Positives = 136/157 (86%), Gaps = 5/157 (3%)

Query: 21  VVSCRPKLFSSVRCPIKTKKNNNGRLALRIQAYDSSKNESNNNGSNDSKPPNGAL-PKGR 79
           +V  R +L+SS+R P K K  + GR ALR Q+++S  N S+N  +NDSKPPNG+  PK R
Sbjct: 24  LVLNRSQLYSSIRFPRKRK--SRGRFALRAQSFESPPNNSSN--ANDSKPPNGSFQPKSR 79

Query: 80  RDILLEYVKNVQPEFMELFVKRAPEQVVDAMRQTVTNMIGTLPPQFFAVTVTTVAENLAQ 139
           RDILLEYVKNVQPEFMELFVKRAP+QVVDAMRQTVTNMIGTLPPQFFAVTVTTVAENLAQ
Sbjct: 80  RDILLEYVKNVQPEFMELFVKRAPQQVVDAMRQTVTNMIGTLPPQFFAVTVTTVAENLAQ 139

Query: 140 LMYSVMMTGYMFKNAQYRLELQQSLEQVALPEVLDKK 176
           LMYSVMMTGYMFKNAQYRLELQQSLEQ ALPEV +KK
Sbjct: 140 LMYSVMMTGYMFKNAQYRLELQQSLEQAALPEVQEKK 176

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|358248580|ref|NP_001240161.1| uncharacterized protein LOC100815202 [Glycine max] gi|255641632|gb|ACU21088.1| unknown [Glycine max]

 Score =  229 bits (584), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 115/150 (76%), Positives = 128/150 (85%), Gaps = 5/150 (3%)

Query: 30  SSVRCPIKTKKNNNGRLALRIQAYDSSKNESNNNGS--NDSKPPNGALPKGRRDILLEYV 87
           SS+  P   K  + GR  LR++AYDSS N+++N  S   DSKPPNG L K RR+ILLEYV
Sbjct: 41  SSISFPRNLK--HKGRFGLRVEAYDSSNNDTSNPASAGGDSKPPNGTLSKSRREILLEYV 98

Query: 88  KNVQPEFMELFVKRAPEQVVDAMRQTVTNMIGTLPPQFFAVTVTTVAENLAQLMYSVMMT 147
           KNVQPEFMELFVKRAP+QVVDAMRQTVTNMIGTLPPQFFAVT+TTVAENLAQLMYS+MMT
Sbjct: 99  KNVQPEFMELFVKRAPQQVVDAMRQTVTNMIGTLPPQFFAVTITTVAENLAQLMYSIMMT 158

Query: 148 GYMFKNAQYRLELQQSLEQ-VALPEVLDKK 176
           GYMFKNAQYRLELQ+ LEQ VALP+V DKK
Sbjct: 159 GYMFKNAQYRLELQEGLEQVVALPDVQDKK 188

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356517424|ref|XP_003527387.1| PREDICTED: uncharacterized protein LOC100783908 [Glycine max]

 Score =  229 bits (584), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 112/135 (82%), Positives = 123/135 (91%), Gaps = 2/135 (1%)

Query: 44  GRLALRIQAYDSSKNESNNNGS-NDSKPPNGALPKGRRDILLEYVKNVQPEFMELFVKRA 102
           GR  LR++AYDSS N+++N  S  DSKPPNG L K RR+ILLEYVKNVQPEFMELFVKRA
Sbjct: 50  GRFGLRVEAYDSSNNDNSNPASAGDSKPPNGTLSKSRREILLEYVKNVQPEFMELFVKRA 109

Query: 103 PEQVVDAMRQTVTNMIGTLPPQFFAVTVTTVAENLAQLMYSVMMTGYMFKNAQYRLELQQ 162
           P+QVVDAMRQTVTNMIGTLPPQFFAVT+TTVAENLAQLMYS+MMTGYMFKNAQYRLELQ+
Sbjct: 110 PQQVVDAMRQTVTNMIGTLPPQFFAVTITTVAENLAQLMYSIMMTGYMFKNAQYRLELQE 169

Query: 163 SLEQ-VALPEVLDKK 176
           SLEQ VALP+V DKK
Sbjct: 170 SLEQVVALPDVQDKK 184

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449452967|ref|XP_004144230.1| PREDICTED: uncharacterized protein LOC101214493 [Cucumis sativus] gi|449489317|ref|XP_004158277.1| PREDICTED: uncharacterized protein LOC101231379 [Cucumis sativus]

 Score =  227 bits (578), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 111/137 (81%), Positives = 125/137 (91%), Gaps = 1/137 (0%)

Query: 40  KNNNGRLALRIQAYDSSKNESNNNGSNDSKPPNGALPKGRRDILLEYVKNVQPEFMELFV 99
           K  NG ++ R++AYDSSK+++++  S DSKPPNG LPK RRDILLEYVKNVQPEFMELFV
Sbjct: 39  KPRNG-VSFRLRAYDSSKSDNSDASSADSKPPNGTLPKTRRDILLEYVKNVQPEFMELFV 97

Query: 100 KRAPEQVVDAMRQTVTNMIGTLPPQFFAVTVTTVAENLAQLMYSVMMTGYMFKNAQYRLE 159
           ++AP+QVV+AMRQTVTNMIGTLPPQFFAVTVTTVAENLAQLMYSVMMTGYMFKNAQ RLE
Sbjct: 98  QKAPQQVVEAMRQTVTNMIGTLPPQFFAVTVTTVAENLAQLMYSVMMTGYMFKNAQNRLE 157

Query: 160 LQQSLEQVALPEVLDKK 176
           LQQSLEQVALPE  D+K
Sbjct: 158 LQQSLEQVALPEPKDEK 174

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388491314|gb|AFK33723.1| unknown [Lotus japonicus]

 Score =  224 bits (570), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 108/136 (79%), Positives = 119/136 (87%), Gaps = 3/136 (2%)

Query: 41  NNNGRLALRIQAYDSSKNESNNNGSNDSKPPNGALPKGRRDILLEYVKNVQPEFMELFVK 100
           N  GR  LR++AYDSS N +   G ++SKPPNG L K RR+ILLEYVKNVQPEFME+FVK
Sbjct: 52  NRKGRSPLRVEAYDSSTNPA---GDSNSKPPNGTLSKSRREILLEYVKNVQPEFMEMFVK 108

Query: 101 RAPEQVVDAMRQTVTNMIGTLPPQFFAVTVTTVAENLAQLMYSVMMTGYMFKNAQYRLEL 160
           RAP+QVVDAMRQTVTNMIGTLPPQFFAVT+TTVAEN AQLMYSVMMTGYMFKNAQYRLEL
Sbjct: 109 RAPQQVVDAMRQTVTNMIGTLPPQFFAVTITTVAENPAQLMYSVMMTGYMFKNAQYRLEL 168

Query: 161 QQSLEQVALPEVLDKK 176
           Q+ LE VALP+V DKK
Sbjct: 169 QEGLEHVALPDVQDKK 184

Source: Lotus japonicus

Species: Lotus japonicus

Genus: Lotus

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|118487779|gb|ABK95713.1| unknown [Populus trichocarpa]

 Score =  219 bits (557), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 120/156 (76%), Positives = 136/156 (87%), Gaps = 3/156 (1%)

Query: 24  CRPKLFSSVRCPI-KTKKNNNGRLALRIQAYDSSKNESNNNGS-NDSKPPNGAL-PKGRR 80
            RP+L SSV  P  K K  NNGRL  R++AYDSSK++S++N    D+KPPNG++ PK RR
Sbjct: 30  TRPRLCSSVSFPRNKEKYCNNGRLGFRVKAYDSSKDDSSSNNKSGDAKPPNGSVQPKNRR 89

Query: 81  DILLEYVKNVQPEFMELFVKRAPEQVVDAMRQTVTNMIGTLPPQFFAVTVTTVAENLAQL 140
           +ILLEYVKNVQPEFMELFVKRAP QVVDAMRQTVTNMIGTLPPQFFAVT+TTVAENLAQL
Sbjct: 90  EILLEYVKNVQPEFMELFVKRAPPQVVDAMRQTVTNMIGTLPPQFFAVTITTVAENLAQL 149

Query: 141 MYSVMMTGYMFKNAQYRLELQQSLEQVALPEVLDKK 176
           MYSVMMTGYMFKNAQ+RLELQQSLEQVALP+  ++K
Sbjct: 150 MYSVMMTGYMFKNAQHRLELQQSLEQVALPDAQEEK 185

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255539126|ref|XP_002510628.1| conserved hypothetical protein [Ricinus communis] gi|223551329|gb|EEF52815.1| conserved hypothetical protein [Ricinus communis]

 Score =  216 bits (549), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 123/159 (77%), Positives = 137/159 (86%), Gaps = 5/159 (3%)

Query: 18  SVTVVSCRPKLFSSVRCPIKTKKNNNGRLALRIQAYDSSKNESNNNGSNDSKPPNGALPK 77
           S  ++S RP    S+    K   +  GRL LRI+AYDSSKN+S++N S DSKPP+ +LPK
Sbjct: 38  STFILSGRP----SISFSRKRNTSIKGRLGLRIRAYDSSKNDSSSN-SADSKPPSSSLPK 92

Query: 78  GRRDILLEYVKNVQPEFMELFVKRAPEQVVDAMRQTVTNMIGTLPPQFFAVTVTTVAENL 137
            R+DILLEYVKNVQPEFMELFVKRAP+QVVDAMRQTVTNMIGTLPPQFFAVTVTTVAENL
Sbjct: 93  TRKDILLEYVKNVQPEFMELFVKRAPQQVVDAMRQTVTNMIGTLPPQFFAVTVTTVAENL 152

Query: 138 AQLMYSVMMTGYMFKNAQYRLELQQSLEQVALPEVLDKK 176
           AQLMYSVMMTGYMFKNAQYR+ELQQSLEQVALPEV +KK
Sbjct: 153 AQLMYSVMMTGYMFKNAQYRMELQQSLEQVALPEVEEKK 191

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224083247|ref|XP_002306971.1| predicted protein [Populus trichocarpa] gi|222856420|gb|EEE93967.1| predicted protein [Populus trichocarpa]

 Score =  213 bits (541), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 117/150 (78%), Positives = 132/150 (88%), Gaps = 3/150 (2%)

Query: 30  SSVRCPI-KTKKNNNGRLALRIQAYDSSKNESNNNGS-NDSKPPNGAL-PKGRRDILLEY 86
           SSV  P  K K  NNGRL  R++AYDSSK++S++N    D+KPPNG++ PK RR+ILLEY
Sbjct: 1   SSVSFPRNKEKYCNNGRLGFRVKAYDSSKDDSSSNNKSGDAKPPNGSVQPKNRREILLEY 60

Query: 87  VKNVQPEFMELFVKRAPEQVVDAMRQTVTNMIGTLPPQFFAVTVTTVAENLAQLMYSVMM 146
           VKNVQPEFMELFVKRAP QVVDAMRQTVTNMIGTLPPQFFAVT+TTVAENLAQLMYSVMM
Sbjct: 61  VKNVQPEFMELFVKRAPPQVVDAMRQTVTNMIGTLPPQFFAVTITTVAENLAQLMYSVMM 120

Query: 147 TGYMFKNAQYRLELQQSLEQVALPEVLDKK 176
           TGYMFKNAQ+RLELQQSLEQVALP+  ++K
Sbjct: 121 TGYMFKNAQHRLELQQSLEQVALPDAQEEK 150

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224065695|ref|XP_002301925.1| predicted protein [Populus trichocarpa] gi|222843651|gb|EEE81198.1| predicted protein [Populus trichocarpa]

 Score =  206 bits (525), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 114/155 (73%), Positives = 131/155 (84%), Gaps = 3/155 (1%)

Query: 25  RPKLFSSVRCPI-KTKKNNNGRLALRIQAYDSSKNESNNNGS--NDSKPPNGALPKGRRD 81
           R +L SSV  P  K    +  R   R++AYDSSKN+S++N +   D+KPPNG +PK RR+
Sbjct: 28  RSRLCSSVCFPGNKGSYCSERRFGFRVKAYDSSKNDSSSNNNNSGDAKPPNGTMPKTRRE 87

Query: 82  ILLEYVKNVQPEFMELFVKRAPEQVVDAMRQTVTNMIGTLPPQFFAVTVTTVAENLAQLM 141
           ILLEYVKNVQPEFMELFVKR+P+QVVDAMRQTV NMIGTLPPQFFAVTVTTVAENLAQLM
Sbjct: 88  ILLEYVKNVQPEFMELFVKRSPQQVVDAMRQTVANMIGTLPPQFFAVTVTTVAENLAQLM 147

Query: 142 YSVMMTGYMFKNAQYRLELQQSLEQVALPEVLDKK 176
           YSVMMTGYMFKNAQYRL+LQQSLEQVALP+  ++K
Sbjct: 148 YSVMMTGYMFKNAQYRLDLQQSLEQVALPDAQEEK 182

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|6633836|gb|AAF19695.1|AC008047_2 F2K11.3 [Arabidopsis thaliana]

 Score =  197 bits (500), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 114/180 (63%), Positives = 135/180 (75%), Gaps = 13/180 (7%)

Query: 1   MNSLTAKPCFIYQPPSSSVT--VVSCRPKLF---SSVRCPIKT---KKNNNGRL-ALRIQ 51
           M SL+ +   +  PPS      + +  PKL    SSV  P+KT   K +  G L  LR++
Sbjct: 1   MCSLSMQFSLLQSPPSRPCPSFLANHEPKLSTTSSSVTFPLKTNTWKCSGTGNLLVLRVK 60

Query: 52  AYDSSKNESNNNGSNDSKPPNGALPKGRRDILLEYVKNVQPEFMELFVKRAPEQVVDAMR 111
           AY SS + S ++ +    PPNG  PK RRDILLEYV+NV+PEFME+FVKRAP+ VV+AMR
Sbjct: 61  AYGSSSDSSADSST----PPNGTRPKSRRDILLEYVQNVKPEFMEMFVKRAPKHVVEAMR 116

Query: 112 QTVTNMIGTLPPQFFAVTVTTVAENLAQLMYSVMMTGYMFKNAQYRLELQQSLEQVALPE 171
           QTVTNMIGTLPPQFFAVTVT+VAENLAQLM SV+MTGYMF+NAQYRLELQQSLEQVALPE
Sbjct: 117 QTVTNMIGTLPPQFFAVTVTSVAENLAQLMMSVLMTGYMFRNAQYRLELQQSLEQVALPE 176

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

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Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	201
TAIR|locus:2026669	341	AT1G63610 "AT1G63610" [Arabido	0.830	0.489	0.609	4.8e-46
TAIR|locus:2060495	386	AT2G14910 [Arabidopsis thalian	0.432	0.225	0.356	9.1e-12
TAIR|locus:2147875	355	AT5G14970 "AT5G14970" [Arabido	0.417	0.236	0.321	5.1e-11
GENEDB_PFALCIPARUM|PFE1330c	796	PFE1330c "hypothetical protein	0.378	0.095	0.298	2.1e-07
UNIPROTKB|Q8I3J8	796	PFE1330c "Putative uncharacter	0.378	0.095	0.298	2.1e-07

TAIR|locus:2026669 AT1G63610 "AT1G63610" [Arabidopsis thaliana (taxid:3702)]

 Score = 483 (175.1 bits), Expect = 4.8e-46, P = 4.8e-46
 Identities = 111/182 (60%), Positives = 128/182 (70%)

Query:     1 MNSLTAKPCFIYQPPSSSVT--VVSCRPKLF---SSVRCPIKT---KKNNNGRL-ALRIQ 51
             M SL+ +   +  PPS      + +  PKL    SSV  P+KT   K +  G L  LR++
Sbjct:     1 MCSLSMQFSLLQSPPSRPCPSFLANHEPKLSTTSSSVTFPLKTNTWKCSGTGNLLVLRVK 60

Query:    52 AYXXXXXXXXXXXXXXXXPPNGAL--PKGRRDILLEYVKNVQPEFMELFVKRAPEQVVDA 109
             AY                PPNG    PK RRDILLEYV+NV+PEFME+FVKRAP+ VV+A
Sbjct:    61 AYGSSSDSSADSST----PPNGTRQQPKSRRDILLEYVQNVKPEFMEMFVKRAPKHVVEA 116

Query:   110 MRQTVTNMIGTLPPQFFAVTVTTVAENLAQLMYSVMMTGYMFKNAQYRLELQQSLEQVAL 169
             MRQTVTNMIGTLPPQFFAVTVT+VAENLAQLM SV+MTGYMF+NAQYRLELQQSLEQVAL
Sbjct:   117 MRQTVTNMIGTLPPQFFAVTVTSVAENLAQLMMSVLMTGYMFRNAQYRLELQQSLEQVAL 176

Query:   170 PE 171
             PE
Sbjct:   177 PE 178

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0009507 "chloroplast" evidence=ISM;IDA

GO:0009570 "chloroplast stroma" evidence=IDA

GO:0010207 "photosystem II assembly" evidence=RCA

TAIR|locus:2060495 AT2G14910 [Arabidopsis thaliana (taxid:3702)]

 Score = 166 (63.5 bits), Expect = 9.1e-12, P = 9.1e-12
 Identities = 31/87 (35%), Positives = 58/87 (66%)

Query:    79 RRDILLEYVKNVQPEFMELFVKRAPEQVVDAMRQTVTNMIGTLPPQFFAVTVTTVAENLA 138
             ++ +L + ++ ++P  + L  K  P   +DAM++T++ M+G LP   F V + ++ E L+
Sbjct:    77 KKCVLSDLIQEIEPLDVSLIQKDVPVTTLDAMKRTISGMLGLLPSDRFQVHIESLWEPLS 136

Query:   139 QLMYSVMMTGYMFKNAQYRLELQQSLE 165
             +L+ S MMTGY  +NA+YRL L+++L+
Sbjct:   137 KLLVSSMMTGYTLRNAEYRLFLEKNLD 163

GO:0009507 "chloroplast" evidence=ISM

GO:0015996 "chlorophyll catabolic process" evidence=RCA

TAIR|locus:2147875 AT5G14970 "AT5G14970" [Arabidopsis thaliana (taxid:3702)]

 Score = 140 (54.3 bits), Expect = 5.1e-11, Sum P(2) = 5.1e-11
 Identities = 27/84 (32%), Positives = 51/84 (60%)

Query:    82 ILLEYVKNVQPEFMELFVKRAPEQVVDAMRQTVTNMIGTLPPQFFAVTVTTVAENLAQLM 141
             ++   V  +QP    +  K   +   D+M+QT+++M+G LP   F+V+VT   + L +L+
Sbjct:    79 VIANLVNRIQPLDTSVISKGLSDSAKDSMKQTISSMLGLLPSDQFSVSVTISEQPLYRLL 138

Query:   142 YSVMMTGYMFKNAQYRLELQQSLE 165
              S ++TGY   NA+YR+ L+++ +
Sbjct:   139 ISSIITGYTLWNAEYRVSLRRNFD 162

GO:0000023 "maltose metabolic process" evidence=RCA

GO:0015996 "chlorophyll catabolic process" evidence=RCA

GO:0019252 "starch biosynthetic process" evidence=RCA

GENEDB_PFALCIPARUM|PFE1330c PFE1330c "hypothetical protein, conserved" [Plasmodium falciparum (taxid:5833)]

 Score = 120 (47.3 bits), Expect = 2.1e-07, Sum P(2) = 2.1e-07
 Identities = 23/77 (29%), Positives = 42/77 (54%)

Query:    89 NVQP-EFMELFVKRAPEQVVDAMRQTVTNMIGTLPPQFFAVTVTTVAENLAQLMYSVMMT 147
             ++ P E +  F +   E+V +A++  + N+IG +       ++    E +   +  +++T
Sbjct:   462 SISPNELINRFFENTSERVKEAVKNIIFNIIGNIQKYTIETSILITYEKIYNFLLQIILT 521

Query:   148 GYMFKNAQYRLELQQSL 164
             GYM KNA YRL L +SL
Sbjct:   522 GYMIKNADYRLTLNESL 538

GO:0020011 "apicoplast" evidence=RCA

UNIPROTKB|Q8I3J8 PFE1330c "Putative uncharacterized protein" [Plasmodium falciparum 3D7 (taxid:36329)]

 Score = 120 (47.3 bits), Expect = 2.1e-07, Sum P(2) = 2.1e-07
 Identities = 23/77 (29%), Positives = 42/77 (54%)

Query:    89 NVQP-EFMELFVKRAPEQVVDAMRQTVTNMIGTLPPQFFAVTVTTVAENLAQLMYSVMMT 147
             ++ P E +  F +   E+V +A++  + N+IG +       ++    E +   +  +++T
Sbjct:   462 SISPNELINRFFENTSERVKEAVKNIIFNIIGNIQKYTIETSILITYEKIYNFLLQIILT 521

Query:   148 GYMFKNAQYRLELQQSL 164
             GYM KNA YRL L +SL
Sbjct:   522 GYMIKNADYRLTLNESL 538

GO:0020011 "apicoplast" evidence=RCA

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Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

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Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

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Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	201
pfam05542	85	pfam05542, DUF760, Protein of unknown function (DU	8e-35

>gnl|CDD|203271 pfam05542, DUF760, Protein of unknown function (DUF760)

 Score =  117 bits (296), Expect = 8e-35
 Identities = 38/84 (45%), Positives = 60/84 (71%)

Query: 81  DILLEYVKNVQPEFMELFVKRAPEQVVDAMRQTVTNMIGTLPPQFFAVTVTTVAENLAQL 140
           ++LL+Y++++ PE +      A  +V++AMR+ V+ ++G+LP   F VT+ T  ENLAQL
Sbjct: 1   NVLLQYIQSLPPETLARLADSASPEVLEAMRRNVSGLLGSLPSDHFEVTIQTSRENLAQL 60

Query: 141 MYSVMMTGYMFKNAQYRLELQQSL 164
           + S MMTGY  +NA+ RLEL++SL
Sbjct: 61  LASSMMTGYFLRNAEQRLELERSL 84

This family contains several uncharacterized plant proteins. Length = 85

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	201
PF05542	86	DUF760: Protein of unknown function (DUF760); Inte	100.0

>PF05542 DUF760: Protein of unknown function (DUF760); InterPro: IPR008479 This entry contains uncharacterised proteins

Probab=100.00  E-value=4e-36  Score=223.67  Aligned_cols=85  Identities=44%  Similarity=0.733  Sum_probs=83.5

Q ss_pred             hHHHHHHHhcCchHHHHHhccCCHHHHHHHHHHHHHhhcCC-CCCCcceEEEecHHhHHHHHHHHHhHhHhhchhHHHHH
Q 028937           81 DILLEYVKNVQPEFMELFVKRAPEQVVDAMRQTVTNMIGTL-PPQFFAVTVTTVAENLAQLMYSVMMTGYMFKNAQYRLE  159 (201)
Q Consensus        81 N~LleYLqsl~PE~is~lsk~ASpeV~eaM~qtV~gLLG~L-P~~~F~VtItTsrE~LArLLaSaMMTGYfLRNAEqRLe  159 (201)
                      |.||+|||+++||.+++|++++||||+|+|+++|+++||.+ |+++|+++|+|+||+||+|++|+|||||||||||||++
T Consensus         1 n~L~~yi~~l~pe~~~~l~~~~s~ev~e~m~~~v~~llG~l~p~~~~~~~i~~s~~~La~L~~~~mm~GYfLr~~E~R~~   80 (86)
T PF05542_consen    1 NDLLQYIQSLKPERIQQLSEPASPEVLEAMKQHVSGLLGNLSPSDQFNVTIQTSRENLAQLLAWSMMTGYFLRNAEQRLE   80 (86)
T ss_pred             ChHHHHHHHCCHHHHHHhhccCCHHHHHHHHHHHHHHHcCCCCcccCcceeEECHHHHHHHHHHHHHHhHHHHHHHHHHH
Confidence            78999999999999999999999999999999999999999 99999999999999999999999999999999999999


Q ss_pred             HHHhhh
Q 028937          160 LQQSLE  165 (201)
Q Consensus       160 LErsL~  165 (201)
                      ||++|.
T Consensus        81 Le~sL~   86 (86)
T PF05542_consen   81 LERSLK   86 (86)
T ss_pred             HHHhcC
Confidence            999984

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Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00