Citrus Sinensis ID: 028945


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-
MVVPFVHTGMQEVMPIGATFPRIGKTVTVLIGDPIEFDDLVDEEQTKYLSRGKLYDAVASRIGHRLKKLKLQVDRLALEQPSAECVADILHMVDQESLGLQNHLLNEDYSLAQEALVQSKLDITPTQERSFFRMGLSYGDAFASRMRGYMDPTELMGFAARGLFMNGRTTDIAAIVRERGPLRAWKQYMEANLLGKWNLLM
cEEEEEEccccccccccccccccccEEEEEEccccccHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHcccccccccccccccHHHHHHHHHHcccccccHHHHHccccccccccHHHHHHHHcccHHHHHHHHHHHHHHccccHHHHHHHHcccHHHHHHHHHHHcccccccccc
ccEEEEEccHHHcccccccccccccEEEEEEcccccHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHccccccccccccccccccccccccEEccccccccccccccccccHHHHHHHcccHHHHHHHHHHHHHHcccccccccccccccHHHHHHHHHHHHHHHHHHHcc
mvvpfvhtgmqevmpigatfprigKTVTVLigdpiefddlvDEEQTKYLSRGKLYDAVASRIGHRLKKLKLQVDRLALEQPSAECVADILHMVDQeslglqnhllneDYSLAQEALVQSklditptqerSFFRMGLSYGDAFAsrmrgymdptelMGFAArglfmngrtTDIAAIVRERGPLRAWKQYMEANLLGKWNLLM
mvvpfvhtgmqevmpigatfpriGKTVTVLIGDPIEFDDLVDEEQTKylsrgklydavASRIGHRLKKLKLQVDRLALEQPSAECVADILHMVDQESLGLQNHLLNEDYSLAQEALVQSKLDITPTQERSFFRMGLSYGDAFASRMRGYMDPTELMGFAARGLFMNGRTTDIAAIVRERGPLRAWKQYMEAnllgkwnllm
MVVPFVHTGMQEVMPIGATFPRIGKTVTVLIGDPIEFDDLVDEEQTKYLSRGKLYDAVASRIGHRLKKLKLQVDRLALEQPSAECVADILHMVDQESLGLQNHLLNEDYSLAQEALVQSKLDITPTQERSFFRMGLSYGDAFASRMRGYMDPTELMGFAARGLFMNGRTTDIAAIVRERGPLRAWKQYMEANLLGKWNLLM
***PFVHTGMQEVMPIGATFPRIGKTVTVLIGDPIEFDDLVDEEQTKYLSRGKLYDAVASRIGHRLKKLKLQVDRLALEQPSAECVADILHMVDQESLGLQNHLLNEDYSLAQEALVQSKLDITPTQERSFFRMGLSYGDAFASRMRGYMDPTELMGFAARGLFMNGRTTDIAAIVRERGPLRAWKQYMEANLLGKWNL**
MVVPFVHTGMQEVMPIGATFPRIGKTVTVLIGDPIEFDDLVDE*********KLYDAVASRIGHRLKKLK*******************L*MVDQESLG****************************************DAFASRMRGYMDPTELMGFAARGLFMNG***************RAWKQYMEANLLGKWNLL*
MVVPFVHTGMQEVMPIGATFPRIGKTVTVLIGDPIEFDDLVDEEQTKYLSRGKLYDAVASRIGHRLKKLKLQVDRLALEQPSAECVADILHMVDQESLGLQNHLLNEDYSLAQEALVQSKLDITPTQERSFFRMGLSYGDAFASRMRGYMDPTELMGFAARGLFMNGRTTDIAAIVRERGPLRAWKQYMEANLLGKWNLLM
MVVPFVHTGMQEVMPIGATFPRIGKTVTVLIGDPIEFDDLVDEEQTKYLSRGKLYDAVASRIGHRLKKLKLQVDRLALEQPSAECVADILHMVDQESLGL*********************************MGLSYGDAFASRMRGYMDPTELMGFAARGLFMNGR*******VRERGPLRAWKQYMEANLLGKWNLLM
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MVVPFVHTGMQEVMPIGATFPRIGKTVTVLIGDPIEFDDLVDEEQTKYLSRGKLYDAVASRIGHRLKKLKLQVDRLALEQPSAECVADILHMVDQESLGLQNHLLNEDYSLAQEALVQSKLDITPTQERSFFRMGLSYGDAFASRMRGYMDPTELMGFAARGLFMNGRTTDIAAIVRERGPLRAWKQYMEANLLGKWNLLM
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query201 2.2.26 [Sep-21-2011]
Q6IV77262 Tafazzin OS=Macaca mulatt yes no 0.378 0.290 0.298 0.0004
Q6IV78262 Tafazzin OS=Saimiri sciur N/A no 0.378 0.290 0.298 0.0004
Q6IV83292 Tafazzin OS=Gorilla goril N/A no 0.378 0.260 0.298 0.0004
Q6IV76262 Tafazzin OS=Erythrocebus N/A no 0.378 0.290 0.298 0.0004
Q6IV84292 Tafazzin OS=Pan troglodyt yes no 0.378 0.260 0.298 0.0008
Q16635292 Tafazzin OS=Homo sapiens yes no 0.378 0.260 0.298 0.0008
>sp|Q6IV77|TAZ_MACMU Tafazzin OS=Macaca mulatta GN=TAZ PE=2 SV=1 Back     alignment and function desciption
 Score = 45.1 bits (105), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 23/77 (29%), Positives = 42/77 (54%), Gaps = 1/77 (1%)

Query: 1   MVVPFVHTGMQEVMPIGAT-FPRIGKTVTVLIGDPIEFDDLVDEEQTKYLSRGKLYDAVA 59
           +++P  H GM +V+P     FPR G+ +TVLIG P     +++  + +  S  ++  A+ 
Sbjct: 178 IILPLWHVGMNDVLPNSPPYFPRFGQKITVLIGKPFSALPILERLRAENKSAVEMRKALT 237

Query: 60  SRIGHRLKKLKLQVDRL 76
             I    ++LK Q ++L
Sbjct: 238 DFIQEEFQRLKTQAEQL 254




Some isoforms may be involved in cardiolipin metabolism.
Macaca mulatta (taxid: 9544)
>sp|Q6IV78|TAZ_SAISC Tafazzin OS=Saimiri sciureus GN=TAZ PE=3 SV=1 Back     alignment and function description
>sp|Q6IV83|TAZ_GORGO Tafazzin OS=Gorilla gorilla gorilla GN=TAZ PE=3 SV=1 Back     alignment and function description
>sp|Q6IV76|TAZ_ERYPA Tafazzin OS=Erythrocebus patas GN=TAZ PE=2 SV=1 Back     alignment and function description
>sp|Q6IV84|TAZ_PANTR Tafazzin OS=Pan troglodytes GN=TAZ PE=3 SV=1 Back     alignment and function description
>sp|Q16635|TAZ_HUMAN Tafazzin OS=Homo sapiens GN=TAZ PE=1 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query201
359487638 459 PREDICTED: uncharacterized protein LOC10 0.985 0.431 0.575 6e-62
147786913 459 hypothetical protein VITISV_026039 [Viti 0.985 0.431 0.566 2e-61
224123600 462 predicted protein [Populus trichocarpa] 0.945 0.411 0.549 8e-58
255542736 461 taz protein, putative [Ricinus communis] 0.965 0.420 0.517 6e-48
356505825 468 PREDICTED: tafazzin-like [Glycine max] 0.965 0.414 0.486 6e-48
449435629 479 PREDICTED: uncharacterized protein LOC10 0.960 0.402 0.495 1e-47
356572982 467 PREDICTED: uncharacterized protein LOC10 0.965 0.415 0.481 7e-47
357511839 463 Tafazzin [Medicago truncatula] gi|355501 0.970 0.421 0.490 8e-46
297829076 461 phospholipid/glycerol acyltransferase fa 0.940 0.409 0.456 7e-42
110736432244 hypothetical protein [Arabidopsis thalia 0.900 0.741 0.446 3e-35
>gi|359487638|ref|XP_002283765.2| PREDICTED: uncharacterized protein LOC100252917 [Vitis vinifera] gi|296089698|emb|CBI39517.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
 Score =  242 bits (617), Expect = 6e-62,   Method: Compositional matrix adjust.
 Identities = 122/212 (57%), Positives = 157/212 (74%), Gaps = 14/212 (6%)

Query: 1   MVVPFVHTGMQEVMPIGATFPRIGKTVTVLIGDPIEFDDLVDEEQTKYLSRGKLYDAVAS 60
           +VVPFVHTGMQEVMPIGA FPRIG+ VTVLIGDPI FDDL++EEQT+++SRGKLYDAV+S
Sbjct: 246 IVVPFVHTGMQEVMPIGANFPRIGQAVTVLIGDPIHFDDLLNEEQTQHMSRGKLYDAVSS 305

Query: 61  RIGHRLKKLKLQVDRLALEQP---------SAECVADILHMVDQESLGLQNHLLNEDYSL 111
           R+  RL++LK+QVD+LALE           + E  A ILH VD ES G+ +++ +ED S 
Sbjct: 306 RVSRRLQELKVQVDKLALEHSIQLQNHDMQTTEWAAGILHQVDWESFGMGSYITSEDDSS 365

Query: 112 AQ-EALVQSKLDITPTQERS----FFRMGLSYGDAFASRMRGYMDPTELMGFAARGLFMN 166
           ++ E     KL++T TQE +    +F MG SY     SR+RGYMDPTELMGFAARGLF+N
Sbjct: 366 SRLEIQSPMKLNVTNTQEHAPSERYFGMGFSYEGGIVSRIRGYMDPTELMGFAARGLFLN 425

Query: 167 GRTTDIAAIVRERGPLRAWKQYMEANLLGKWN 198
            R  +  A ++E  PL+AWKQ++EAN+L +WN
Sbjct: 426 RRAEEKLASIQEIRPLKAWKQFLEANILPQWN 457




Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147786913|emb|CAN68895.1| hypothetical protein VITISV_026039 [Vitis vinifera] Back     alignment and taxonomy information
>gi|224123600|ref|XP_002330161.1| predicted protein [Populus trichocarpa] gi|222871617|gb|EEF08748.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|255542736|ref|XP_002512431.1| taz protein, putative [Ricinus communis] gi|223548392|gb|EEF49883.1| taz protein, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|356505825|ref|XP_003521690.1| PREDICTED: tafazzin-like [Glycine max] Back     alignment and taxonomy information
>gi|449435629|ref|XP_004135597.1| PREDICTED: uncharacterized protein LOC101222774 [Cucumis sativus] gi|449517345|ref|XP_004165706.1| PREDICTED: uncharacterized LOC101222774 [Cucumis sativus] Back     alignment and taxonomy information
>gi|356572982|ref|XP_003554644.1| PREDICTED: uncharacterized protein LOC100817507 [Glycine max] Back     alignment and taxonomy information
>gi|357511839|ref|XP_003626208.1| Tafazzin [Medicago truncatula] gi|355501223|gb|AES82426.1| Tafazzin [Medicago truncatula] Back     alignment and taxonomy information
>gi|297829076|ref|XP_002882420.1| phospholipid/glycerol acyltransferase family protein [Arabidopsis lyrata subsp. lyrata] gi|297328260|gb|EFH58679.1| phospholipid/glycerol acyltransferase family protein [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|110736432|dbj|BAF00184.1| hypothetical protein [Arabidopsis thaliana] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query201
TAIR|locus:2079772448 AT3G05510 [Arabidopsis thalian 0.900 0.404 0.451 4e-35
RGD|1588532262 Taz "tafazzin" [Rattus norvegi 0.378 0.290 0.298 0.00065
TAIR|locus:2079772 AT3G05510 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 380 (138.8 bits), Expect = 4.0e-35, P = 4.0e-35
 Identities = 89/197 (45%), Positives = 127/197 (64%)

Query:     1 MVVPFVHTGMQEVMPIGATFPRIGKTVTVLIGDPIEFDDLVDEEQTKYLSRGKLYDAVAS 60
             MVVPFVHTGMQ++MP+GA+ PRIGKTVTV+IGDPI F+D++  E  +++SR  LYDAV+S
Sbjct:   253 MVVPFVHTGMQDIMPVGASVPRIGKTVTVIIGDPIHFNDILSTEGAQHVSRKHLYDAVSS 312

Query:    61 RIGHRLKKLKLQVDRLALEQPS---------AECVADILHMVDQESLGLQNHLLNEDYSL 111
             RIG RL  LK QVDR+ +EQ S         ++  A+I H VD +S G+     +E+ S 
Sbjct:   313 RIGQRLYDLKAQVDRVYIEQQSMMSHNAKTPSDRAAEIFHRVDWDSFGMGAQF-SEESSP 371

Query:   112 AQEALVQSKLDITPTQERSFFRMGLSYGDAFASRMRGYMDPTELMGFAARGLFMNGRTTD 171
             + + + QS   I  + +R   R+    G +   +++  MD TE+MGFAARGL MN   + 
Sbjct:   372 SSKPIGQSDDRIVRSPKR---RVSPEGGVSL--KIKKLMDSTEMMGFAARGLLMNEYKSR 426

Query:   172 IAAIVRERGPLRAWKQY 188
             + +    R PL+AW++Y
Sbjct:   427 VESANVGR-PLKAWREY 442




GO:0005739 "mitochondrion" evidence=ISM
GO:0008152 "metabolic process" evidence=IEA;ISS
GO:0016746 "transferase activity, transferring acyl groups" evidence=IEA;ISS
GO:0006655 "phosphatidylglycerol biosynthetic process" evidence=RCA
RGD|1588532 Taz "tafazzin" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Fail to connect to STRING server


Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query201
cd07989184 cd07989, LPLAT_AGPAT-like, Lysophospholipid Acyltr 4e-05
>gnl|CDD|153251 cd07989, LPLAT_AGPAT-like, Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: AGPAT-like Back     alignment and domain information
 Score = 42.3 bits (100), Expect = 4e-05
 Identities = 14/45 (31%), Positives = 20/45 (44%), Gaps = 1/45 (2%)

Query: 2   VVPFVHTGMQEVMPIGATFPRIGKTVTVLIGDPIEFDDLVDEEQT 46
           +VP   +G    +P G         VTV IG+PI  + L   E+ 
Sbjct: 132 IVPVAISGTWGSLPKGK-KLPRPGRVTVRIGEPIPPEGLELAEED 175


Lysophospholipid acyltransferase (LPLAT) superfamily member: acyltransferases of de novo and remodeling pathways of glycerophospholipid biosynthesis which catalyze the incorporation of an acyl group from either acylCoAs or acyl-acyl carrier proteins (acylACPs) into acceptors such as glycerol 3-phosphate, dihydroxyacetone phosphate or lyso-phosphatidic acid. Included in this subgroup are such LPLATs as 1-acyl-sn-glycerol-3-phosphate acyltransferase (AGPAT, PlsC), Tafazzin (product of Barth syndrome gene), and similar proteins. Length = 184

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 201
KOG2847286 consensus Phosphate acyltransferase [Lipid transpo 99.28
cd07987212 LPLAT_MGAT-like Lysophospholipid Acyltransferases 98.32
PLN02783315 diacylglycerol O-acyltransferase 97.98
PRK15018245 1-acyl-sn-glycerol-3-phosphate acyltransferase; Pr 97.74
PTZ00261355 acyltransferase; Provisional 97.73
cd07985235 LPLAT_GPAT Lysophospholipid Acyltransferases (LPLA 97.72
cd07991211 LPLAT_LPCAT1-like Lysophospholipid Acyltransferase 96.55
KOG2848276 consensus 1-acyl-sn-glycerol-3-phosphate acyltrans 96.1
PRK03355 783 glycerol-3-phosphate acyltransferase; Validated 95.86
TIGR03703 799 plsB glycerol-3-phosphate O-acyltransferase. Membe 94.06
PRK06814 1140 acylglycerophosphoethanolamine acyltransferase; Pr 93.83
COG0204255 PlsC 1-acyl-sn-glycerol-3-phosphate acyltransferas 93.7
PRK04974 818 glycerol-3-phosphate acyltransferase; Validated 93.6
PRK08043 718 bifunctional acyl-[acyl carrier protein] synthetas 93.4
PRK08633 1146 2-acyl-glycerophospho-ethanolamine acyltransferase 91.52
COG2121214 Uncharacterized protein conserved in bacteria [Fun 91.29
PLN02177497 glycerol-3-phosphate acyltransferase 90.98
cd07992203 LPLAT_AAK14816-like Lysophospholipid Acyltransfera 90.24
cd07984192 LPLAT_LABLAT-like Lysophospholipid Acyltransferase 89.71
PF03982297 DAGAT: Diacylglycerol acyltransferase ; InterPro: 88.54
PLN02833376 glycerol acyltransferase family protein 85.24
KOG0831334 consensus Acyl-CoA:diacylglycerol acyltransferase 85.12
>KOG2847 consensus Phosphate acyltransferase [Lipid transport and metabolism] Back     alignment and domain information
Probab=99.28  E-value=3e-12  Score=113.47  Aligned_cols=80  Identities=44%  Similarity=0.677  Sum_probs=72.5

Q ss_pred             CEEeEEEecCCccCCCC-CcCCCCCCeEEEEECCCccCCCcchhHhhhccChHHHHHHHHHHHHHHHHHhHHhhhhhhcc
Q 028945            1 MVVPFVHTGMQEVMPIG-ATFPRIGKTVTVLIGDPIEFDDLVDEEQTKYLSRGKLYDAVASRIGHRLKKLKLQVDRLALE   79 (201)
Q Consensus         1 iVVPVaI~GT~~VlP~G-~~~PR~gkrVtV~IGePI~~~dL~~~~~~~~~s~~e~~r~ITdrImerI~eL~~q~~~l~~e   79 (201)
                      +|||++|+|++++||.+ .+.|++|++|+|.||+||+++++..+...+..++...++.+|++|+++++.|+.|+++++.+
T Consensus       187 IVlPi~h~Gmedi~P~~~p~vp~~Gk~vtV~IG~P~~~~d~~~t~l~~~~~~p~~~k~~td~iq~~~qdL~~~~~~~~~~  266 (286)
T KOG2847|consen  187 IVLPIWHTGMEDIMPEAPPYVPRFGKTVTVTIGDPINFDDVEWTVLAEKVSTPKLRKALTDEIQERFQDLREQVERLLRA  266 (286)
T ss_pred             EEeehhhhhHHHhCccCCCccCCCCCEEEEEeCCCcchhHHHHHHHhhccCCchhhhhhhHHHHHHHHHHHHHHHHHHHH
Confidence            69999999999999999 99999999999999999999987666666667778999999999999999999999998864


Q ss_pred             C
Q 028945           80 Q   80 (201)
Q Consensus        80 q   80 (201)
                      +
T Consensus       267 ~  267 (286)
T KOG2847|consen  267 H  267 (286)
T ss_pred             H
Confidence            3



>cd07987 LPLAT_MGAT-like Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: MGAT-like Back     alignment and domain information
>PLN02783 diacylglycerol O-acyltransferase Back     alignment and domain information
>PRK15018 1-acyl-sn-glycerol-3-phosphate acyltransferase; Provisional Back     alignment and domain information
>PTZ00261 acyltransferase; Provisional Back     alignment and domain information
>cd07985 LPLAT_GPAT Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: GPAT Back     alignment and domain information
>cd07991 LPLAT_LPCAT1-like Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: LPCAT1-like Back     alignment and domain information
>KOG2848 consensus 1-acyl-sn-glycerol-3-phosphate acyltransferase [Lipid transport and metabolism] Back     alignment and domain information
>PRK03355 glycerol-3-phosphate acyltransferase; Validated Back     alignment and domain information
>TIGR03703 plsB glycerol-3-phosphate O-acyltransferase Back     alignment and domain information
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional Back     alignment and domain information
>COG0204 PlsC 1-acyl-sn-glycerol-3-phosphate acyltransferase [Lipid metabolism] Back     alignment and domain information
>PRK04974 glycerol-3-phosphate acyltransferase; Validated Back     alignment and domain information
>PRK08043 bifunctional acyl-[acyl carrier protein] synthetase/2-acylglycerophosphoethanolamine acyltransferase; Validated Back     alignment and domain information
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated Back     alignment and domain information
>COG2121 Uncharacterized protein conserved in bacteria [Function unknown] Back     alignment and domain information
>PLN02177 glycerol-3-phosphate acyltransferase Back     alignment and domain information
>cd07992 LPLAT_AAK14816-like Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: Unknown AAK14816-like Back     alignment and domain information
>cd07984 LPLAT_LABLAT-like Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: LABLAT-like Back     alignment and domain information
>PF03982 DAGAT: Diacylglycerol acyltransferase ; InterPro: IPR007130 The terminal step of triacylglycerol (TAG) formation is catalysed by the enzyme diacylglycerol acyltransferase (DAGAT) [, ] Back     alignment and domain information
>PLN02833 glycerol acyltransferase family protein Back     alignment and domain information
>KOG0831 consensus Acyl-CoA:diacylglycerol acyltransferase (DGAT) [Lipid transport and metabolism] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query201
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 5e-06
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
 Score = 45.6 bits (107), Expect = 5e-06
 Identities = 31/231 (13%), Positives = 70/231 (30%), Gaps = 74/231 (32%)

Query: 5   FVHTGMQEVMPIGATFPRIGKTVTVL--------------------IGDPIEFDDLVDEE 44
            +  G+     +G+     GKT   L                    + +    + +++  
Sbjct: 154 LID-GV-----LGS-----GKTWVALDVCLSYKVQCKMDFKIFWLNLKNCNSPETVLEML 202

Query: 45  QTKYLSRGKLYDAVA---SRIGHRLKKLKLQVDRLALEQPSAECVADILHMV-DQESLGL 100
           Q         + + +   S I  R+  ++ ++ RL   +P   C+  +L  V + ++   
Sbjct: 203 QKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCL-LVLLNVQNAKAW-- 259

Query: 101 QNHLLNEDYSLAQEAL-VQSKLDITPTQERS--FFRMGLSYGDAFASRMRGYMDPTELMG 157
                         A  +  K+ +T T+ +    F    +            + P E+  
Sbjct: 260 -------------NAFNLSCKILLT-TRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKS 305

Query: 158 FAARGLFMNGRTTD---------------IAAIVRERGPLRAWKQYMEANL 193
              +  +++ R  D               IA  +R+ G    W  +   N 
Sbjct: 306 LLLK--YLDCRPQDLPREVLTTNPRRLSIIAESIRD-GLAT-WDNWKHVNC 352


Structure Templates Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query201
1iuq_A367 Glycerol-3-phosphate acyltransferase; open twisted 97.79
>1iuq_A Glycerol-3-phosphate acyltransferase; open twisted alpha/beta, four helix bundle; 1.55A {Cucurbita moschata} SCOP: c.112.1.1 PDB: 1k30_A Back     alignment and structure
Probab=97.79  E-value=3.2e-05  Score=70.59  Aligned_cols=66  Identities=9%  Similarity=0.163  Sum_probs=49.5

Q ss_pred             EEeEEEecCCccCCCC---------CcCCCCCCeEEEEECCCccCCCcchhHhhhccChHHHHHHHHHHHHHHHHHhHHh
Q 028945            2 VVPFVHTGMQEVMPIG---------ATFPRIGKTVTVLIGDPIEFDDLVDEEQTKYLSRGKLYDAVASRIGHRLKKLKLQ   72 (201)
Q Consensus         2 VVPVaI~GT~~VlP~G---------~~~PR~gkrVtV~IGePI~~~dL~~~~~~~~~s~~e~~r~ITdrImerI~eL~~q   72 (201)
                      ||||+|. ++++||+.         .++.+++ +|.|.||+||+++++    .....+.++..+.+++.|++.|.+.+.+
T Consensus       270 IvPvaI~-t~~imppp~~ve~~~g~~r~i~~~-~V~v~ig~pI~~~~l----~~~~e~~~e~~~~l~e~v~~~I~~~y~~  343 (367)
T 1iuq_A          270 LFPLALL-CHDIMPPPSQVEIEIGEKRVIAFN-GAGLSVAPEISFEEI----AATHKNPEEVREAYSKALFDSVAMQYNV  343 (367)
T ss_dssp             EEEEEEE-CGGGSCCC----------CCCCCB-CCEEEECCCCCHHHH----HHTSSSHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             EEEEEEE-eccccCCcccccccccccceeecc-cEEEEECCccchhhc----cccccchHHHHHHHHHHHHHHHHHHHHH
Confidence            8999999 77999874         2344555 499999999999886    2222334566778999999999988755


Q ss_pred             h
Q 028945           73 V   73 (201)
Q Consensus        73 ~   73 (201)
                      .
T Consensus       344 l  344 (367)
T 1iuq_A          344 L  344 (367)
T ss_dssp             H
T ss_pred             H
Confidence            3




Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query201
d1iuqa_367 Glycerol-3-phosphate (1)-acyltransferase {Cushaw s 97.43
>d1iuqa_ c.112.1.1 (A:) Glycerol-3-phosphate (1)-acyltransferase {Cushaw squash (Cucurbita moschata) [TaxId: 3662]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: Glycerol-3-phosphate (1)-acyltransferase
superfamily: Glycerol-3-phosphate (1)-acyltransferase
family: Glycerol-3-phosphate (1)-acyltransferase
domain: Glycerol-3-phosphate (1)-acyltransferase
species: Cushaw squash (Cucurbita moschata) [TaxId: 3662]
Probab=97.43  E-value=0.0001  Score=64.91  Aligned_cols=75  Identities=8%  Similarity=0.072  Sum_probs=47.6

Q ss_pred             EEeEEEecCCccCCCCC--------cCCCCCCeEEEEECCCccCCCcchhHhhhccChHHHHHHHHHHHHHHHHHhHHh-
Q 028945            2 VVPFVHTGMQEVMPIGA--------TFPRIGKTVTVLIGDPIEFDDLVDEEQTKYLSRGKLYDAVASRIGHRLKKLKLQ-   72 (201)
Q Consensus         2 VVPVaI~GT~~VlP~G~--------~~PR~gkrVtV~IGePI~~~dL~~~~~~~~~s~~e~~r~ITdrImerI~eL~~q-   72 (201)
                      |+||+|.|++.+.|.+.        +.++.+ +|.|.||+||+++++.    +...+..+..+.+++.|.+.+.+.... 
T Consensus       270 V~Pvai~~~d~~pP~~~v~~~ige~R~~~~~-~V~i~~G~pId~~~~~----~~~~~~~e~~ea~~k~l~d~v~eq~~~L  344 (367)
T d1iuqa_         270 LFPLALLCHDIMPPPSQVEIEIGEKRVIAFN-GAGLSVAPEISFEEIA----ATHKNPEEVREAYSKALFDSVAMQYNVL  344 (367)
T ss_dssp             EEEEEEECGGGSCCC----------CCCCCB-CCEEEECCCCCHHHHH----HTSSSHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             EechhhhcccccCCCcccccchhhccccCCC-ceeEEeCCCcchhhhh----hhccchHHHHHHHHHHHHHHHHHHHHHH
Confidence            89999999998888753        345444 5999999999998762    222333455555666666666554332 


Q ss_pred             hhhhhccCC
Q 028945           73 VDRLALEQP   81 (201)
Q Consensus        73 ~~~l~~eq~   81 (201)
                      ...+++++.
T Consensus       345 k~ai~gk~~  353 (367)
T d1iuqa_         345 KTAISGKQG  353 (367)
T ss_dssp             HHHTTTCCG
T ss_pred             HHHHhcCCC
Confidence            244555544