Citrus Sinensis ID: 028945
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 201 | ||||||
| 359487638 | 459 | PREDICTED: uncharacterized protein LOC10 | 0.985 | 0.431 | 0.575 | 6e-62 | |
| 147786913 | 459 | hypothetical protein VITISV_026039 [Viti | 0.985 | 0.431 | 0.566 | 2e-61 | |
| 224123600 | 462 | predicted protein [Populus trichocarpa] | 0.945 | 0.411 | 0.549 | 8e-58 | |
| 255542736 | 461 | taz protein, putative [Ricinus communis] | 0.965 | 0.420 | 0.517 | 6e-48 | |
| 356505825 | 468 | PREDICTED: tafazzin-like [Glycine max] | 0.965 | 0.414 | 0.486 | 6e-48 | |
| 449435629 | 479 | PREDICTED: uncharacterized protein LOC10 | 0.960 | 0.402 | 0.495 | 1e-47 | |
| 356572982 | 467 | PREDICTED: uncharacterized protein LOC10 | 0.965 | 0.415 | 0.481 | 7e-47 | |
| 357511839 | 463 | Tafazzin [Medicago truncatula] gi|355501 | 0.970 | 0.421 | 0.490 | 8e-46 | |
| 297829076 | 461 | phospholipid/glycerol acyltransferase fa | 0.940 | 0.409 | 0.456 | 7e-42 | |
| 110736432 | 244 | hypothetical protein [Arabidopsis thalia | 0.900 | 0.741 | 0.446 | 3e-35 |
| >gi|359487638|ref|XP_002283765.2| PREDICTED: uncharacterized protein LOC100252917 [Vitis vinifera] gi|296089698|emb|CBI39517.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
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Score = 242 bits (617), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 122/212 (57%), Positives = 157/212 (74%), Gaps = 14/212 (6%)
Query: 1 MVVPFVHTGMQEVMPIGATFPRIGKTVTVLIGDPIEFDDLVDEEQTKYLSRGKLYDAVAS 60
+VVPFVHTGMQEVMPIGA FPRIG+ VTVLIGDPI FDDL++EEQT+++SRGKLYDAV+S
Sbjct: 246 IVVPFVHTGMQEVMPIGANFPRIGQAVTVLIGDPIHFDDLLNEEQTQHMSRGKLYDAVSS 305
Query: 61 RIGHRLKKLKLQVDRLALEQP---------SAECVADILHMVDQESLGLQNHLLNEDYSL 111
R+ RL++LK+QVD+LALE + E A ILH VD ES G+ +++ +ED S
Sbjct: 306 RVSRRLQELKVQVDKLALEHSIQLQNHDMQTTEWAAGILHQVDWESFGMGSYITSEDDSS 365
Query: 112 AQ-EALVQSKLDITPTQERS----FFRMGLSYGDAFASRMRGYMDPTELMGFAARGLFMN 166
++ E KL++T TQE + +F MG SY SR+RGYMDPTELMGFAARGLF+N
Sbjct: 366 SRLEIQSPMKLNVTNTQEHAPSERYFGMGFSYEGGIVSRIRGYMDPTELMGFAARGLFLN 425
Query: 167 GRTTDIAAIVRERGPLRAWKQYMEANLLGKWN 198
R + A ++E PL+AWKQ++EAN+L +WN
Sbjct: 426 RRAEEKLASIQEIRPLKAWKQFLEANILPQWN 457
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Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|147786913|emb|CAN68895.1| hypothetical protein VITISV_026039 [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|224123600|ref|XP_002330161.1| predicted protein [Populus trichocarpa] gi|222871617|gb|EEF08748.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
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| >gi|255542736|ref|XP_002512431.1| taz protein, putative [Ricinus communis] gi|223548392|gb|EEF49883.1| taz protein, putative [Ricinus communis] | Back alignment and taxonomy information |
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| >gi|356505825|ref|XP_003521690.1| PREDICTED: tafazzin-like [Glycine max] | Back alignment and taxonomy information |
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| >gi|449435629|ref|XP_004135597.1| PREDICTED: uncharacterized protein LOC101222774 [Cucumis sativus] gi|449517345|ref|XP_004165706.1| PREDICTED: uncharacterized LOC101222774 [Cucumis sativus] | Back alignment and taxonomy information |
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| >gi|356572982|ref|XP_003554644.1| PREDICTED: uncharacterized protein LOC100817507 [Glycine max] | Back alignment and taxonomy information |
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| >gi|357511839|ref|XP_003626208.1| Tafazzin [Medicago truncatula] gi|355501223|gb|AES82426.1| Tafazzin [Medicago truncatula] | Back alignment and taxonomy information |
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| >gi|297829076|ref|XP_002882420.1| phospholipid/glycerol acyltransferase family protein [Arabidopsis lyrata subsp. lyrata] gi|297328260|gb|EFH58679.1| phospholipid/glycerol acyltransferase family protein [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
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| >gi|110736432|dbj|BAF00184.1| hypothetical protein [Arabidopsis thaliana] | Back alignment and taxonomy information |
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Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 201 | ||||||
| TAIR|locus:2079772 | 448 | AT3G05510 [Arabidopsis thalian | 0.900 | 0.404 | 0.451 | 4e-35 | |
| RGD|1588532 | 262 | Taz "tafazzin" [Rattus norvegi | 0.378 | 0.290 | 0.298 | 0.00065 |
| TAIR|locus:2079772 AT3G05510 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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Score = 380 (138.8 bits), Expect = 4.0e-35, P = 4.0e-35
Identities = 89/197 (45%), Positives = 127/197 (64%)
Query: 1 MVVPFVHTGMQEVMPIGATFPRIGKTVTVLIGDPIEFDDLVDEEQTKYLSRGKLYDAVAS 60
MVVPFVHTGMQ++MP+GA+ PRIGKTVTV+IGDPI F+D++ E +++SR LYDAV+S
Sbjct: 253 MVVPFVHTGMQDIMPVGASVPRIGKTVTVIIGDPIHFNDILSTEGAQHVSRKHLYDAVSS 312
Query: 61 RIGHRLKKLKLQVDRLALEQPS---------AECVADILHMVDQESLGLQNHLLNEDYSL 111
RIG RL LK QVDR+ +EQ S ++ A+I H VD +S G+ +E+ S
Sbjct: 313 RIGQRLYDLKAQVDRVYIEQQSMMSHNAKTPSDRAAEIFHRVDWDSFGMGAQF-SEESSP 371
Query: 112 AQEALVQSKLDITPTQERSFFRMGLSYGDAFASRMRGYMDPTELMGFAARGLFMNGRTTD 171
+ + + QS I + +R R+ G + +++ MD TE+MGFAARGL MN +
Sbjct: 372 SSKPIGQSDDRIVRSPKR---RVSPEGGVSL--KIKKLMDSTEMMGFAARGLLMNEYKSR 426
Query: 172 IAAIVRERGPLRAWKQY 188
+ + R PL+AW++Y
Sbjct: 427 VESANVGR-PLKAWREY 442
|
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| RGD|1588532 Taz "tafazzin" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
|---|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 201 | |||
| cd07989 | 184 | cd07989, LPLAT_AGPAT-like, Lysophospholipid Acyltr | 4e-05 |
| >gnl|CDD|153251 cd07989, LPLAT_AGPAT-like, Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: AGPAT-like | Back alignment and domain information |
|---|
Score = 42.3 bits (100), Expect = 4e-05
Identities = 14/45 (31%), Positives = 20/45 (44%), Gaps = 1/45 (2%)
Query: 2 VVPFVHTGMQEVMPIGATFPRIGKTVTVLIGDPIEFDDLVDEEQT 46
+VP +G +P G VTV IG+PI + L E+
Sbjct: 132 IVPVAISGTWGSLPKGK-KLPRPGRVTVRIGEPIPPEGLELAEED 175
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Lysophospholipid acyltransferase (LPLAT) superfamily member: acyltransferases of de novo and remodeling pathways of glycerophospholipid biosynthesis which catalyze the incorporation of an acyl group from either acylCoAs or acyl-acyl carrier proteins (acylACPs) into acceptors such as glycerol 3-phosphate, dihydroxyacetone phosphate or lyso-phosphatidic acid. Included in this subgroup are such LPLATs as 1-acyl-sn-glycerol-3-phosphate acyltransferase (AGPAT, PlsC), Tafazzin (product of Barth syndrome gene), and similar proteins. Length = 184 |
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 201 | |||
| KOG2847 | 286 | consensus Phosphate acyltransferase [Lipid transpo | 99.28 | |
| cd07987 | 212 | LPLAT_MGAT-like Lysophospholipid Acyltransferases | 98.32 | |
| PLN02783 | 315 | diacylglycerol O-acyltransferase | 97.98 | |
| PRK15018 | 245 | 1-acyl-sn-glycerol-3-phosphate acyltransferase; Pr | 97.74 | |
| PTZ00261 | 355 | acyltransferase; Provisional | 97.73 | |
| cd07985 | 235 | LPLAT_GPAT Lysophospholipid Acyltransferases (LPLA | 97.72 | |
| cd07991 | 211 | LPLAT_LPCAT1-like Lysophospholipid Acyltransferase | 96.55 | |
| KOG2848 | 276 | consensus 1-acyl-sn-glycerol-3-phosphate acyltrans | 96.1 | |
| PRK03355 | 783 | glycerol-3-phosphate acyltransferase; Validated | 95.86 | |
| TIGR03703 | 799 | plsB glycerol-3-phosphate O-acyltransferase. Membe | 94.06 | |
| PRK06814 | 1140 | acylglycerophosphoethanolamine acyltransferase; Pr | 93.83 | |
| COG0204 | 255 | PlsC 1-acyl-sn-glycerol-3-phosphate acyltransferas | 93.7 | |
| PRK04974 | 818 | glycerol-3-phosphate acyltransferase; Validated | 93.6 | |
| PRK08043 | 718 | bifunctional acyl-[acyl carrier protein] synthetas | 93.4 | |
| PRK08633 | 1146 | 2-acyl-glycerophospho-ethanolamine acyltransferase | 91.52 | |
| COG2121 | 214 | Uncharacterized protein conserved in bacteria [Fun | 91.29 | |
| PLN02177 | 497 | glycerol-3-phosphate acyltransferase | 90.98 | |
| cd07992 | 203 | LPLAT_AAK14816-like Lysophospholipid Acyltransfera | 90.24 | |
| cd07984 | 192 | LPLAT_LABLAT-like Lysophospholipid Acyltransferase | 89.71 | |
| PF03982 | 297 | DAGAT: Diacylglycerol acyltransferase ; InterPro: | 88.54 | |
| PLN02833 | 376 | glycerol acyltransferase family protein | 85.24 | |
| KOG0831 | 334 | consensus Acyl-CoA:diacylglycerol acyltransferase | 85.12 |
| >KOG2847 consensus Phosphate acyltransferase [Lipid transport and metabolism] | Back alignment and domain information |
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Probab=99.28 E-value=3e-12 Score=113.47 Aligned_cols=80 Identities=44% Similarity=0.677 Sum_probs=72.5
Q ss_pred CEEeEEEecCCccCCCC-CcCCCCCCeEEEEECCCccCCCcchhHhhhccChHHHHHHHHHHHHHHHHHhHHhhhhhhcc
Q 028945 1 MVVPFVHTGMQEVMPIG-ATFPRIGKTVTVLIGDPIEFDDLVDEEQTKYLSRGKLYDAVASRIGHRLKKLKLQVDRLALE 79 (201)
Q Consensus 1 iVVPVaI~GT~~VlP~G-~~~PR~gkrVtV~IGePI~~~dL~~~~~~~~~s~~e~~r~ITdrImerI~eL~~q~~~l~~e 79 (201)
+|||++|+|++++||.+ .+.|++|++|+|.||+||+++++..+...+..++...++.+|++|+++++.|+.|+++++.+
T Consensus 187 IVlPi~h~Gmedi~P~~~p~vp~~Gk~vtV~IG~P~~~~d~~~t~l~~~~~~p~~~k~~td~iq~~~qdL~~~~~~~~~~ 266 (286)
T KOG2847|consen 187 IVLPIWHTGMEDIMPEAPPYVPRFGKTVTVTIGDPINFDDVEWTVLAEKVSTPKLRKALTDEIQERFQDLREQVERLLRA 266 (286)
T ss_pred EEeehhhhhHHHhCccCCCccCCCCCEEEEEeCCCcchhHHHHHHHhhccCCchhhhhhhHHHHHHHHHHHHHHHHHHHH
Confidence 69999999999999999 99999999999999999999987666666667778999999999999999999999998864
Q ss_pred C
Q 028945 80 Q 80 (201)
Q Consensus 80 q 80 (201)
+
T Consensus 267 ~ 267 (286)
T KOG2847|consen 267 H 267 (286)
T ss_pred H
Confidence 3
|
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| >cd07987 LPLAT_MGAT-like Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: MGAT-like | Back alignment and domain information |
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| >PLN02783 diacylglycerol O-acyltransferase | Back alignment and domain information |
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| >PRK15018 1-acyl-sn-glycerol-3-phosphate acyltransferase; Provisional | Back alignment and domain information |
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| >PTZ00261 acyltransferase; Provisional | Back alignment and domain information |
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| >cd07985 LPLAT_GPAT Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: GPAT | Back alignment and domain information |
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| >cd07991 LPLAT_LPCAT1-like Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: LPCAT1-like | Back alignment and domain information |
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| >KOG2848 consensus 1-acyl-sn-glycerol-3-phosphate acyltransferase [Lipid transport and metabolism] | Back alignment and domain information |
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| >PRK03355 glycerol-3-phosphate acyltransferase; Validated | Back alignment and domain information |
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| >TIGR03703 plsB glycerol-3-phosphate O-acyltransferase | Back alignment and domain information |
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| >PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional | Back alignment and domain information |
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| >COG0204 PlsC 1-acyl-sn-glycerol-3-phosphate acyltransferase [Lipid metabolism] | Back alignment and domain information |
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| >PRK04974 glycerol-3-phosphate acyltransferase; Validated | Back alignment and domain information |
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| >PRK08043 bifunctional acyl-[acyl carrier protein] synthetase/2-acylglycerophosphoethanolamine acyltransferase; Validated | Back alignment and domain information |
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| >PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated | Back alignment and domain information |
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| >COG2121 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
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| >PLN02177 glycerol-3-phosphate acyltransferase | Back alignment and domain information |
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| >cd07992 LPLAT_AAK14816-like Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: Unknown AAK14816-like | Back alignment and domain information |
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| >cd07984 LPLAT_LABLAT-like Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: LABLAT-like | Back alignment and domain information |
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| >PF03982 DAGAT: Diacylglycerol acyltransferase ; InterPro: IPR007130 The terminal step of triacylglycerol (TAG) formation is catalysed by the enzyme diacylglycerol acyltransferase (DAGAT) [, ] | Back alignment and domain information |
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| >PLN02833 glycerol acyltransferase family protein | Back alignment and domain information |
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| >KOG0831 consensus Acyl-CoA:diacylglycerol acyltransferase (DGAT) [Lipid transport and metabolism] | Back alignment and domain information |
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Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
No homologous structure with e-value below 0.005
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 201 | |||
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 5e-06 |
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 45.6 bits (107), Expect = 5e-06
Identities = 31/231 (13%), Positives = 70/231 (30%), Gaps = 74/231 (32%)
Query: 5 FVHTGMQEVMPIGATFPRIGKTVTVL--------------------IGDPIEFDDLVDEE 44
+ G+ +G+ GKT L + + + +++
Sbjct: 154 LID-GV-----LGS-----GKTWVALDVCLSYKVQCKMDFKIFWLNLKNCNSPETVLEML 202
Query: 45 QTKYLSRGKLYDAVA---SRIGHRLKKLKLQVDRLALEQPSAECVADILHMV-DQESLGL 100
Q + + + S I R+ ++ ++ RL +P C+ +L V + ++
Sbjct: 203 QKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCL-LVLLNVQNAKAW-- 259
Query: 101 QNHLLNEDYSLAQEAL-VQSKLDITPTQERS--FFRMGLSYGDAFASRMRGYMDPTELMG 157
A + K+ +T T+ + F + + P E+
Sbjct: 260 -------------NAFNLSCKILLT-TRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKS 305
Query: 158 FAARGLFMNGRTTD---------------IAAIVRERGPLRAWKQYMEANL 193
+ +++ R D IA +R+ G W + N
Sbjct: 306 LLLK--YLDCRPQDLPREVLTTNPRRLSIIAESIRD-GLAT-WDNWKHVNC 352
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Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 201 | |||
| 1iuq_A | 367 | Glycerol-3-phosphate acyltransferase; open twisted | 97.79 |
| >1iuq_A Glycerol-3-phosphate acyltransferase; open twisted alpha/beta, four helix bundle; 1.55A {Cucurbita moschata} SCOP: c.112.1.1 PDB: 1k30_A | Back alignment and structure |
|---|
Probab=97.79 E-value=3.2e-05 Score=70.59 Aligned_cols=66 Identities=9% Similarity=0.163 Sum_probs=49.5
Q ss_pred EEeEEEecCCccCCCC---------CcCCCCCCeEEEEECCCccCCCcchhHhhhccChHHHHHHHHHHHHHHHHHhHHh
Q 028945 2 VVPFVHTGMQEVMPIG---------ATFPRIGKTVTVLIGDPIEFDDLVDEEQTKYLSRGKLYDAVASRIGHRLKKLKLQ 72 (201)
Q Consensus 2 VVPVaI~GT~~VlP~G---------~~~PR~gkrVtV~IGePI~~~dL~~~~~~~~~s~~e~~r~ITdrImerI~eL~~q 72 (201)
||||+|. ++++||+. .++.+++ +|.|.||+||+++++ .....+.++..+.+++.|++.|.+.+.+
T Consensus 270 IvPvaI~-t~~imppp~~ve~~~g~~r~i~~~-~V~v~ig~pI~~~~l----~~~~e~~~e~~~~l~e~v~~~I~~~y~~ 343 (367)
T 1iuq_A 270 LFPLALL-CHDIMPPPSQVEIEIGEKRVIAFN-GAGLSVAPEISFEEI----AATHKNPEEVREAYSKALFDSVAMQYNV 343 (367)
T ss_dssp EEEEEEE-CGGGSCCC----------CCCCCB-CCEEEECCCCCHHHH----HHTSSSHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEEEE-eccccCCcccccccccccceeecc-cEEEEECCccchhhc----cccccchHHHHHHHHHHHHHHHHHHHHH
Confidence 8999999 77999874 2344555 499999999999886 2222334566778999999999988755
Q ss_pred h
Q 028945 73 V 73 (201)
Q Consensus 73 ~ 73 (201)
.
T Consensus 344 l 344 (367)
T 1iuq_A 344 L 344 (367)
T ss_dssp H
T ss_pred H
Confidence 3
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
No hit with e-value below 0.005
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 201 | |||
| d1iuqa_ | 367 | Glycerol-3-phosphate (1)-acyltransferase {Cushaw s | 97.43 |
| >d1iuqa_ c.112.1.1 (A:) Glycerol-3-phosphate (1)-acyltransferase {Cushaw squash (Cucurbita moschata) [TaxId: 3662]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Glycerol-3-phosphate (1)-acyltransferase superfamily: Glycerol-3-phosphate (1)-acyltransferase family: Glycerol-3-phosphate (1)-acyltransferase domain: Glycerol-3-phosphate (1)-acyltransferase species: Cushaw squash (Cucurbita moschata) [TaxId: 3662]
Probab=97.43 E-value=0.0001 Score=64.91 Aligned_cols=75 Identities=8% Similarity=0.072 Sum_probs=47.6
Q ss_pred EEeEEEecCCccCCCCC--------cCCCCCCeEEEEECCCccCCCcchhHhhhccChHHHHHHHHHHHHHHHHHhHHh-
Q 028945 2 VVPFVHTGMQEVMPIGA--------TFPRIGKTVTVLIGDPIEFDDLVDEEQTKYLSRGKLYDAVASRIGHRLKKLKLQ- 72 (201)
Q Consensus 2 VVPVaI~GT~~VlP~G~--------~~PR~gkrVtV~IGePI~~~dL~~~~~~~~~s~~e~~r~ITdrImerI~eL~~q- 72 (201)
|+||+|.|++.+.|.+. +.++.+ +|.|.||+||+++++. +...+..+..+.+++.|.+.+.+....
T Consensus 270 V~Pvai~~~d~~pP~~~v~~~ige~R~~~~~-~V~i~~G~pId~~~~~----~~~~~~~e~~ea~~k~l~d~v~eq~~~L 344 (367)
T d1iuqa_ 270 LFPLALLCHDIMPPPSQVEIEIGEKRVIAFN-GAGLSVAPEISFEEIA----ATHKNPEEVREAYSKALFDSVAMQYNVL 344 (367)
T ss_dssp EEEEEEECGGGSCCC----------CCCCCB-CCEEEECCCCCHHHHH----HTSSSHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EechhhhcccccCCCcccccchhhccccCCC-ceeEEeCCCcchhhhh----hhccchHHHHHHHHHHHHHHHHHHHHHH
Confidence 89999999998888753 345444 5999999999998762 222333455555666666666554332
Q ss_pred hhhhhccCC
Q 028945 73 VDRLALEQP 81 (201)
Q Consensus 73 ~~~l~~eq~ 81 (201)
...+++++.
T Consensus 345 k~ai~gk~~ 353 (367)
T d1iuqa_ 345 KTAISGKQG 353 (367)
T ss_dssp HHHTTTCCG
T ss_pred HHHHhcCCC
Confidence 244555544
|