Citrus Sinensis ID: 028969

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-
Protein Sequence
MSVDLKRGETLPIHINMTFPALPCDVLSVDAIDMSGKHEVDLDTNIWKLRLNSYGHIIGTEYLTDLVEKEHEEHKHDHNKDHKDDIDEKLHAFGFDEDAENMIKKVKHALESGEGCRVYGVLDVQRVAGNFHISVHGLNIYVAQMIFGGAKNVNVSHVIHDLSFGPKYPGIHNPLDGTVRMLHDTSGTFKYYIKVWPWFCC
Secondary Structure (PSIPRED)
cEEccccccEEEEEEEEEEccccccEEEEEEEEccccEEEcccccEEEEEEccccEEEccEEccccccccccccccccccccccHHHHHHHHccccccHHHHHHHHHHHccccccEEEEEEEEEEEEEEEEEEEEccccccHHEHHccccccccEEEEEEEEEEccccccccccccccEEEEccccEEEEEEEEEEEcccc
Secondary Structure Prediction (SSPRO)
cEEEcccccEEEEEEEEEcccccccEEEEEEEEcccccEEcccccEEEEEEcccccEccHHHHHHHccccccccccccccccHHHHHHHHHHccccccccccHHHHHHccccccccEEEEEEEEEEEEccEEEcccccccEEEcccccccccccEEEEEEEcccccccccccccccccEEEccccccEEEEEEEEEEEEcc
Coil and Loop (DISEMBL)
msvdlkrgetlpihinmtfpalpcdvlsvdaidmsgkhevdldTNIWKLRLNSYghiigteylTDLVEKEHEehkhdhnkdhkddideklhafgfdedAENMIKKVKHALesgegcrvygVLDVQRVAGNFHISVHGLNIYVAQMIFGGAKNVNVSHVIhdlsfgpkypgihnpldgtvrmlhdtsgtfKYYIKVWPWFCC
Flexible Loop (DISEMBL)
MSVDLKRGETLPIHINMTFPALPCDVLSVDAIDMSGKHEVDLDTNIWKLRLNSYGHIIGTEYLTDLVEKEHEEHkhdhnkdhkddIDEKLHAFGFDEDAENMIKKVKHALESGEGCRVYGVLDVQRVAGNFHISVHGLNIYVAQMIFGGAKNVNVSHVIHDLSFGPKYPGIHNPLDGTVRMLHDTSGTFKYYIKVWPWFCC
Low Complexity Region (SEG)
MSVDLKRGETLPIHINMTFPALPCDVLSVDAIDMSGKHEVDLDTNIWKLRLNSYGHIIGTEYLTDLVekeheehkhdhnkdhkddidekLHAFGFDEDAENMIKKVKHALESGEGCRVYGVLDVQRVAGNFHISVHGLNIYVAQMIFGGAKNVNVSHVIHDLSFGPKYPGIHNPLDGTVRMLHDTSGTFKYYIKVWPWFCC
Disordered region (IsUnstruct)
*********TLPIHINMTFPALPCDVLSVDAIDMSGKHEVDLDTNIWKLRLNSYGHIIGTEYLTDLV***********************HAFGFDEDAENMIKKVKHALESGEGCRVYGVLDVQRVAGNFHISVHGLNIYVAQMIFGGAKNVNVSHVIHDLSFGPKYPGIHNPLDGTVRMLHDTSGTFKYYIKVWPWFC*
Disordered Region (DISOPRED)
MSVDLKRGETLPIHINMTFPALPCDVLSVDAIDMSGKHEVDLDTNIWKLRLNSYGHIIGTEYLTDLVEKEHEEHKHDHNKDHKDDIDEKLHAFGFDE**********HALESGEGCRVYGVLDVQRVAGNFHISVHGLNIYVAQMIFGGAKNVNVSHVIHDLSFGPKYPGIHNPLDGTVRMLHDTSGTFKYYIKVWPWFCC
Disordered Region (DISEMBL)
MSVDLKRGETLPIHINMTFPALPCDVLSVDAIDMSGKHEVDLDTNIWKLRLNSYGHIIGTEYLTDLVEK**************DDIDEKLHAFGFDEDAENMIKKVKHALESGEGCRVYGVLDVQRVAGNFHISVHGLNIYVAQMIFGGAKNVNVSHVIHDLSFGPKYPGIHNPLDGTVRMLHDTSGTFKYYIKVWPWFCC
Disordered Region (DISPRO)
MSVDLKRGETLPIHINMTFPALPCDVLSVDAIDMSGKHEVDLDTNIWKLRLNSYGHIIGTEYLTDLVEKEHEEHKHDHNKDHKDDIDEKLHAFGFDEDAENMIKKVKHALESGEGCRVYGVLDVQRVAGNFHISVHGLNIYVAQMIFGGAKNVNVSHVIHDLSFGPKYPGIHNPLDGTVRMLHDTSGTFKYYIKVWPWFCC
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MSVDLKRGETLPIHINMTFPALPCDVLSVDAIDMSGKHEVDLDTNIWKLRLNSYGHIIGTEYLTDLVEKEHEEHKHDHNKDHKDDIDEKLHAFGFDEDAENMIKKVKHALESGEGCRVYGVLDVQRVAGNFHISVHGLNIYVAQMIFGGAKNVNVSHVIHDLSFGPKYPGIHNPLDGTVRMLHDTSGTFKYYIKVWPWFCC
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	201	2.2.26 [Sep-21-2011]
Q803I2	383	Endoplasmic reticulum-Gol	yes	no	0.980	0.514	0.325	1e-25
Q66KH2	389	Endoplasmic reticulum-Gol	N/A	no	0.960	0.496	0.317	4e-25
Q6NVS2	384	Endoplasmic reticulum-Gol	yes	no	0.965	0.505	0.321	1e-24
Q5EAE0	383	Endoplasmic reticulum-Gol	yes	no	0.980	0.514	0.317	2e-24
Q4R8X1	382	Endoplasmic reticulum-Gol	N/A	no	0.950	0.5	0.318	2e-24
Q9Y282	383	Endoplasmic reticulum-Gol	yes	no	0.950	0.498	0.317	4e-24
Q5R8G3	383	Endoplasmic reticulum-Gol	yes	no	0.980	0.514	0.312	8e-24
Q9CQE7	383	Endoplasmic reticulum-Gol	yes	no	0.980	0.514	0.317	8e-24
Q54DW2	383	Probable endoplasmic reti	yes	no	0.950	0.498	0.330	1e-23
Q09895	390	Uncharacterized protein C	yes	no	0.915	0.471	0.300	1e-15

>sp|Q803I2|ERGI3_DANRE Endoplasmic reticulum-Golgi intermediate compartment protein 3 OS=Danio rerio GN=ergic3 PE=2 SV=1

 Score =  116 bits (290), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 74/227 (32%), Positives = 116/227 (51%), Gaps = 30/227 (13%)

Query: 1   MSVDLKRGETLPIHINMTFPALPCDVLSVDAIDMSGKHEVDLDTNIWKLRLNSYGHIIGT 60
           + VD  RG+ L I+I++ FP +PC  LS+DA+D++G+ ++D++ N++K RL+  G  + T
Sbjct: 58  LFVDTSRGDKLRINIDVIFPHMPCAYLSIDAMDVAGEQQLDVEHNLFKQRLDKDGQPVTT 117

Query: 61  EYLTDLVEKEHE-------------EHKHDHNKDHK------DDIDEKLHAFGFDEDAEN 101
           E     + KE E             E  +    D        DD+ E     G+     +
Sbjct: 118 EAEKHDLGKEEEGVFDPSTLDPDRCESCYGAETDDLKCCNTCDDVREAYRRRGWAFKTPD 177

Query: 102 MIKKVKH-------ALESGEGCRVYGVLDVQRVAGNFHI----SVHGLNIYVAQMIFGGA 150
            I++ K          +  EGC+VYG L+V +VAGNFH     S    +++V  +   G 
Sbjct: 178 TIEQCKREGFSQKMQEQKNEGCQVYGFLEVNKVAGNFHFAPGKSFQQSHVHVHDLQSFGL 237

Query: 151 KNVNVSHVIHDLSFGPKYPGIHNPLDGTVRMLHDTSGTFKYYIKVWP 197
            N+N++H I  LSFG  YPGI NPLD T       S  ++Y++K+ P
Sbjct: 238 DNINMTHFIKHLSFGKDYPGIVNPLDDTNVAAPQASMMYQYFVKIVP 284

Possible role in transport between endoplasmic reticulum and Golgi.
Danio rerio (taxid: 7955)

>sp|Q66KH2|ERGI3_XENLA Endoplasmic reticulum-Golgi intermediate compartment protein 3 OS=Xenopus laevis GN=ergic3 PE=2 SV=1

 Score =  114 bits (285), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 74/233 (31%), Positives = 119/233 (51%), Gaps = 40/233 (17%)

Query: 3   VDLKRGETLPIHINMTFPALPCDVLSVDAIDMSGKHEVDLDTNIWKLRLNSYGHIIGTEY 62
           VD  RG+ L I+I++ FP +PC  LS+DA+D++G+ ++D++ N++K RL+     + +E 
Sbjct: 60  VDKSRGDKLKINIDVIFPHMPCAYLSIDAMDVAGEQQLDVEHNLFKQRLDLDKKPVTSEA 119

Query: 63  LTDLVEKEHEE-----HKHDHNK---------------DHKDDIDEKLHAFGFDEDAENM 102
               + K  E+        D N+               +  DD+ E     G+     + 
Sbjct: 120 DRHELGKSEEQVVFDPKTLDPNRCESCYGAETDDFSCCNSCDDVREAYRRKGWAFKTPDS 179

Query: 103 IKKVKH-------ALESGEGCRVYGVLDVQRVAGNFHIS-----------VHGLNIYVAQ 144
           I++ K          +  EGC+VYG L+V +VAGNFH +           VH + I+  Q
Sbjct: 180 IEQCKREGFSQKMQEQKNEGCQVYGFLEVNKVAGNFHFAPGKSFQQSHVHVHAVEIHDLQ 239

Query: 145 MIFGGAKNVNVSHVIHDLSFGPKYPGIHNPLDGTVRMLHDTSGTFKYYIKVWP 197
               G  N+N++H I  LSFG  YPG+ NPLDGT  +   +S  F+Y++K+ P
Sbjct: 240 SF--GLDNINMTHEIKHLSFGKDYPGLVNPLDGTSIVAMQSSMMFQYFVKIVP 290

Possible role in transport between endoplasmic reticulum and Golgi.

Xenopus laevis (taxid: 8355)

>sp|Q6NVS2|ERGI3_XENTR Endoplasmic reticulum-Golgi intermediate compartment protein 3 OS=Xenopus tropicalis GN=ergic3 PE=2 SV=1

 Score =  112 bits (281), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 73/227 (32%), Positives = 118/227 (51%), Gaps = 33/227 (14%)

Query: 3   VDLKRGETLPIHINMTFPALPCDVLSVDAIDMSGKHEVDLDTNIWKLRLNSYGHIIGTEY 62
           VD  RG+ L I+I++ FP +PC  LS+DA+D++G+ ++D++ N++K RL+     + +E 
Sbjct: 60  VDKSRGDKLKINIDVIFPHMPCAYLSIDAMDVAGEQQLDVEHNLFKQRLDKDKKPVTSEA 119

Query: 63  LTDLVEKEHEEH------KHDHNK---------------DHKDDIDEKLHAFGFDEDAEN 101
               + K  EEH        D N+               +  DD+ E     G+     +
Sbjct: 120 DRHELGKS-EEHVVFDPKSLDPNRCESCYGAETDDFSCCNTCDDVREAYRRRGWAFKTPD 178

Query: 102 MIKKVKH-------ALESGEGCRVYGVLDVQRVAGNFHI----SVHGLNIYVAQMIFGGA 150
            I++ K          +  EGC+VYG L+V +VAGNFH     S    +++V  +   G 
Sbjct: 179 SIEQCKREGFSQKMQEQKNEGCQVYGFLEVNKVAGNFHFAPGKSFQQSHVHVHDLQSFGL 238

Query: 151 KNVNVSHVIHDLSFGPKYPGIHNPLDGTVRMLHDTSGTFKYYIKVWP 197
            N+N++H I  LSFG  YPG+ NPLDG+      +S  F+Y++K+ P
Sbjct: 239 DNINMTHEIRHLSFGRDYPGLVNPLDGSSVAAMQSSMMFQYFVKIVP 285

Possible role in transport between endoplasmic reticulum and Golgi.

Xenopus tropicalis (taxid: 8364)

>sp|Q5EAE0|ERGI3_BOVIN Endoplasmic reticulum-Golgi intermediate compartment protein 3 OS=Bos taurus GN=ERGIC3 PE=2 SV=1

 Score =  112 bits (280), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 72/227 (31%), Positives = 117/227 (51%), Gaps = 30/227 (13%)

Query: 1   MSVDLKRGETLPIHINMTFPALPCDVLSVDAIDMSGKHEVDLDTNIWKLRLNSYGHIIGT 60
           + VD  RG+ L I+IN+ FP +PC  LS+DA+D++G+ ++D++ N++K RL+  G  + +
Sbjct: 58  LYVDKSRGDKLKININVLFPHMPCAYLSIDAMDVAGEQQLDVEHNLFKKRLDKDGFPVSS 117

Query: 61  E-------------YLTDLVEKEHEEHKHDHNKD------HKDDIDEKLHAFGFDEDAEN 101
           E             +  D ++ +  E  +    +        +D+ E     G+     +
Sbjct: 118 EAERHELGKVEVKVFDPDSLDPDRCESCYGAEMEDIKCCNSCEDVREAYRRRGWAFKNPD 177

Query: 102 MIKKV-------KHALESGEGCRVYGVLDVQRVAGNFHI----SVHGLNIYVAQMIFGGA 150
            I++        K   +  EGC+VYG L+V +VAGNFH     S    +++V  +   G 
Sbjct: 178 TIEQCRREGFSQKMQEQKNEGCQVYGFLEVNKVAGNFHFAPGKSFQQSHVHVHDLQSFGL 237

Query: 151 KNVNVSHVIHDLSFGPKYPGIHNPLDGTVRMLHDTSGTFKYYIKVWP 197
            N+N++H I  LSFG  YPGI NPLD T       S  F+Y++KV P
Sbjct: 238 DNINMTHYIRHLSFGEDYPGIVNPLDHTNVTAPQASMMFQYFVKVVP 284

Possible role in transport between endoplasmic reticulum and Golgi.

Bos taurus (taxid: 9913)

>sp|Q4R8X1|ERGI3_MACFA Endoplasmic reticulum-Golgi intermediate compartment protein 3 OS=Macaca fascicularis GN=ERGIC3 PE=2 SV=1

 Score =  112 bits (279), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 74/232 (31%), Positives = 115/232 (49%), Gaps = 41/232 (17%)

Query: 1   MSVDLKRGETLPIHINMTFPALPCDVLSVDAIDMSGKHEVDLDTNIWKLRLNSYGHIIGT 60
           + VD  RG+ L I+I++ FP +PC  LS+DA+D++G+ ++D++ N++K RL+  G  + +
Sbjct: 58  LYVDKSRGDKLKINIDVLFPHMPCAYLSIDAMDVAGEQQLDVEHNLFKQRLDKDGTPVSS 117

Query: 61  EYLTDLVEKEHEEHKHDHNKDHKDDIDEKLHAFGFDEDAE-----NMIKKVKHAL----- 110
           E       + HE  K +      D +D       +  +AE     N  + V+ A      
Sbjct: 118 E------AERHELGKVEVTVFGPDSLDPDRCESCYGAEAEDIKCCNTCEDVREAYRRRGA 171

Query: 111 ---------------------ESGEGCRVYGVLDVQRVAGNFHI----SVHGLNIYVAQM 145
                                +  EGC+VYG L+V +VAGNFH     S    +++V  +
Sbjct: 172 FKNPDTIEQCRREGFSQKMQEQKNEGCQVYGFLEVNKVAGNFHFAPGKSFQQSHVHVHDL 231

Query: 146 IFGGAKNVNVSHVIHDLSFGPKYPGIHNPLDGTVRMLHDTSGTFKYYIKVWP 197
              G  N+N++H I  LSFG  YPGI NPLD T       S  F+Y++KV P
Sbjct: 232 QSFGLDNINMTHYIQHLSFGEDYPGIVNPLDHTNVTAPQASMMFQYFVKVVP 283

Possible role in transport between endoplasmic reticulum and Golgi.

Macaca fascicularis (taxid: 9541)

>sp|Q9Y282|ERGI3_HUMAN Endoplasmic reticulum-Golgi intermediate compartment protein 3 OS=Homo sapiens GN=ERGIC3 PE=1 SV=1

 Score =  111 bits (277), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 74/233 (31%), Positives = 115/233 (49%), Gaps = 42/233 (18%)

Query: 1   MSVDLKRGETLPIHINMTFPALPCDVLSVDAIDMSGKHEVDLDTNIWKLRLNSYGHIIGT 60
           + VD  RG+ L I+I++ FP +PC  LS+DA+D++G+ ++D++ N++K RL+  G  + +
Sbjct: 58  LYVDKSRGDKLKINIDVLFPHMPCAYLSIDAMDVAGEQQLDVEHNLFKQRLDKDGIPVSS 117

Query: 61  EYLTDLVEKEHEEHKHDHNKDHKDDIDEKLHAFGFDEDAE-----NMIKKVKHAL----- 110
           E       + HE  K +      D +D       +  +AE     N  + V+ A      
Sbjct: 118 E------AERHELGKVEVTVFDPDSLDPDRCESCYGAEAEDIKCCNTCEDVREAYRRRGW 171

Query: 111 ----------------------ESGEGCRVYGVLDVQRVAGNFHI----SVHGLNIYVAQ 144
                                 +  EGC+VYG L+V +VAGNFH     S    +++V  
Sbjct: 172 AFKNPDTIEQCRREGFSQKMQEQKNEGCQVYGFLEVNKVAGNFHFAPGKSFQQSHVHVHD 231

Query: 145 MIFGGAKNVNVSHVIHDLSFGPKYPGIHNPLDGTVRMLHDTSGTFKYYIKVWP 197
           +   G  N+N++H I  LSFG  YPGI NPLD T       S  F+Y++KV P
Sbjct: 232 LQSFGLDNINMTHYIQHLSFGEDYPGIVNPLDHTNVTAPQASMMFQYFVKVVP 284

Possible role in transport between endoplasmic reticulum and Golgi.

Homo sapiens (taxid: 9606)

>sp|Q5R8G3|ERGI3_PONAB Endoplasmic reticulum-Golgi intermediate compartment protein 3 OS=Pongo abelii GN=ERGIC3 PE=2 SV=1

 Score =  110 bits (274), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 71/227 (31%), Positives = 117/227 (51%), Gaps = 30/227 (13%)

Query: 1   MSVDLKRGETLPIHINMTFPALPCDVLSVDAIDMSGKHEVDLDTNIWKLRLNSYGHIIGT 60
           + VD  RG+ L I+I++ FP +PC  LS+DA+D++G+ ++D++ N++K RL+  G  + +
Sbjct: 58  LYVDKSRGDKLKINIDVLFPHMPCAYLSIDAMDVAGEQQLDVEHNLFKQRLDKDGIPVSS 117

Query: 61  E-------------YLTDLVEKEHEEHKHDHNKD------HKDDIDEKLHAFGFDEDAEN 101
           E             +  D ++ +  E  +    +        +D+ E     G+     +
Sbjct: 118 EAERHELGKVEVTVFDPDSLDPDRCESCYGAEAEDIKCCNTCEDVRETYRRRGWAFKNPD 177

Query: 102 MIKKV-------KHALESGEGCRVYGVLDVQRVAGNFHI----SVHGLNIYVAQMIFGGA 150
            I++        K   +  EGC+VYG L+V +VAGNFH     S    +++V  +   G 
Sbjct: 178 TIEQCRREGFSQKMQEQKNEGCQVYGFLEVNKVAGNFHFAPGKSFQQSHVHVHDLQSFGL 237

Query: 151 KNVNVSHVIHDLSFGPKYPGIHNPLDGTVRMLHDTSGTFKYYIKVWP 197
            N+N++H I  LSFG  YPGI NPLD T       S  F+Y++KV P
Sbjct: 238 DNINMTHYIQHLSFGEDYPGIVNPLDHTNVTAPQASMMFQYFVKVVP 284

Possible role in transport between endoplasmic reticulum and Golgi.

Pongo abelii (taxid: 9601)

>sp|Q9CQE7|ERGI3_MOUSE Endoplasmic reticulum-Golgi intermediate compartment protein 3 OS=Mus musculus GN=Ergic3 PE=2 SV=1

 Score =  110 bits (274), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 72/227 (31%), Positives = 117/227 (51%), Gaps = 30/227 (13%)

Query: 1   MSVDLKRGETLPIHINMTFPALPCDVLSVDAIDMSGKHEVDLDTNIWKLRLNSYGHIIGT 60
           + VD  RG+ L I+I++ FP +PC  LS+DA+D++G+ ++D++ N++K RL+  G  + +
Sbjct: 58  LYVDKSRGDKLKINIDVLFPHMPCAYLSIDAMDVAGEQQLDVEHNLFKKRLDKDGVPVSS 117

Query: 61  EY----LTDLVEKEHEEHKHDHNK---------------DHKDDIDEKLHAFGFDEDAEN 101
           E     L  +     + +  D N+               +  +D+ E     G+     +
Sbjct: 118 EAERHELGKVEVTVFDPNSLDPNRCESCYGAESEDIKCCNSCEDVREAYRRRGWAFKNPD 177

Query: 102 MIKKV-------KHALESGEGCRVYGVLDVQRVAGNFHI----SVHGLNIYVAQMIFGGA 150
            I++        K   +  EGC+VYG L+V +VAGNFH     S    +++V  +   G 
Sbjct: 178 TIEQCRREGFSQKMQEQKNEGCQVYGFLEVNKVAGNFHFAPGKSFQQSHVHVHDLQSFGL 237

Query: 151 KNVNVSHVIHDLSFGPKYPGIHNPLDGTVRMLHDTSGTFKYYIKVWP 197
            N+N++H I  LSFG  YPGI NPLD T       S  F+Y++KV P
Sbjct: 238 DNINMTHYIKHLSFGEDYPGIVNPLDHTNVTAPQASMMFQYFVKVVP 284

Possible role in transport between endoplasmic reticulum and Golgi.

Mus musculus (taxid: 10090)

>sp|Q54DW2|ERGI3_DICDI Probable endoplasmic reticulum-Golgi intermediate compartment protein 3 OS=Dictyostelium discoideum GN=ergic3 PE=3 SV=1

 Score =  109 bits (272), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 77/233 (33%), Positives = 120/233 (51%), Gaps = 42/233 (18%)

Query: 1   MSVDLKRGETLPIHINMTFPALPCDVLSVDAIDMSGKHEVDLDTNIWKLRLNSYGHIIGT 60
           + VD  RGE L I++++TF  LPC  LS+DA+D+SG+H+ D+  NI+K RL+  G  I  
Sbjct: 57  LFVDTTRGEKLKINMDITFHHLPCAYLSLDAMDVSGEHQFDVAHNIFKKRLSPTGQPI-- 114

Query: 61  EYLTDLVEKEHEEHKHDHNKDHKDDI---------------------DEKLHAF---GFD 96
             +     +E E +K +  KD+ D +                     +E   A+   G+ 
Sbjct: 115 --IEAPPIREEEINKKESVKDNNDVVGCGSCYGAEDPSKGIGCCNTCEEVRVAYSKKGWG 172

Query: 97  EDAENMIKKVKHAL------ESGEGCRVYGVLDVQRVAGNFHIS------VHGLNIYVAQ 144
            D   + + ++         ++GEGC+VYG + V +VAGNFH +       H ++++  Q
Sbjct: 173 LDPSGIPQCIREGFTKNLVEQNGEGCQVYGFILVNKVAGNFHFAPGKSFQQHHMHVHDLQ 232

Query: 145 MIFGGAKNVNVSHVIHDLSFGPKYPGIHNPLDGTVRMLHDTSGTFKYYIKVWP 197
               G+   NVSH I+ LSFG  +PGI NPLD   +      G F+Y++KV P
Sbjct: 233 PFKDGS--FNVSHTINRLSFGNDFPGIKNPLDDVTKTEMVGVGMFQYFVKVVP 283

Possible role in transport between endoplasmic reticulum and Golgi.

Dictyostelium discoideum (taxid: 44689)

>sp|Q09895|YAI8_SCHPO Uncharacterized protein C24B11.08c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC24B11.08c PE=3 SV=1

 Score = 82.8 bits (203), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 70/233 (30%), Positives = 104/233 (44%), Gaps = 49/233 (21%)

Query: 3   VDLKRGETLPIHINMTFPALPCDVLSVDAIDMSGKHEVDLDTNIWKLRLNSYGHIIGTEY 62
           V+   G+ + I+ N+TFP +PC +L+VD +D+SG+ + D+   + K RL+  G II  + 
Sbjct: 60  VNPSHGDRMEINFNITFPRIPCQILTVDVLDVSGEFQRDIHHTVSKTRLSPSGEIISVD- 118

Query: 63  LTDLVEKEHEEHKHDHNKDHKD-----------------------DIDEKLHAFGFDEDA 99
             DL     +    D   +  D                       D   K H    D DA
Sbjct: 119 --DLDIGNQQSISDDGAAECGDCYGAADFAPEDTPGCCNTCDAVRDAYGKAHWRIGDVDA 176

Query: 100 ENMIK----KVKHALESGEGCRVYGVLDVQRVAGNFHIS-----------VHGLNIYVAQ 144
               K    K  +  +  EGC + G L V R+AGNFHI+           VH    Y+ +
Sbjct: 177 FKQCKDENFKELYEAQKVEGCNLAGQLSVNRMAGNFHIAPGRSTQNGNQHVHDTRDYINE 236

Query: 145 MIFGGAKNVNVSHVIHDLSFGPKY-PGIH--NPLDGTVRMLHDTSGTFKYYIK 194
           +        ++SH IH LSFGP     +H  NPLDGTV+ +      ++Y+IK
Sbjct: 237 LDLH-----DMSHSIHHLSFGPPLDASVHYSNPLDGTVKKVSTADYRYEYFIK 284

Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	201
356575088	347	PREDICTED: endoplasmic reticulum-Golgi i	0.975	0.564	0.842	1e-92
255637400	347	unknown [Glycine max]	0.975	0.564	0.842	1e-92
297830940	354	hypothetical protein ARALYDRAFT_479742 [	0.980	0.556	0.816	6e-91
11036454	333	unnamed protein product [Arabidopsis tha	0.980	0.591	0.816	6e-91
30686584	354	Endoplasmic reticulum vesicle transporte	0.980	0.556	0.816	6e-91
224086657	351	predicted protein [Populus trichocarpa]	0.980	0.561	0.837	7e-88
225446891	351	PREDICTED: endoplasmic reticulum-Golgi i	0.980	0.561	0.847	2e-87
356547537	351	PREDICTED: probable endoplasmic reticulu	0.980	0.561	0.805	2e-87
224137484	351	predicted protein [Populus trichocarpa]	0.980	0.561	0.817	1e-85
449445069	388	PREDICTED: endoplasmic reticulum-Golgi i	0.965	0.5	0.827	2e-84

>gi|356575088|ref|XP_003555674.1| PREDICTED: endoplasmic reticulum-Golgi intermediate compartment protein 3-like [Glycine max]

 Score =  344 bits (883), Expect = 1e-92,   Method: Compositional matrix adjust.
 Identities = 166/197 (84%), Positives = 179/197 (90%), Gaps = 1/197 (0%)

Query: 1   MSVDLKRGETLPIHINMTFPALPCDVLSVDAIDMSGKHEVDLDTNIWKLRLNSYGHIIGT 60
           MSVDLKRGETLPIHINMTFP+LPCDVLSVDAIDMSGKHEVDLDTNIWKLRLNSYGHIIGT
Sbjct: 58  MSVDLKRGETLPIHINMTFPSLPCDVLSVDAIDMSGKHEVDLDTNIWKLRLNSYGHIIGT 117

Query: 61  EYLTDLVEKEHEEHKHDHNKDHKDDIDEKLHAFGFDEDAENMIKKVKHALESGEGCRVYG 120
           EY++DLVEKEH  HKHD NK+H+   ++K+H    DE  EN+IKKVK AL++GEGCRVYG
Sbjct: 118 EYISDLVEKEHTHHKHDDNKNHEHS-EQKIHLQNLDESTENIIKKVKEALKNGEGCRVYG 176

Query: 121 VLDVQRVAGNFHISVHGLNIYVAQMIFGGAKNVNVSHVIHDLSFGPKYPGIHNPLDGTVR 180
           VLDVQRVAGNFHISVHGLNIYVAQMIF GAKNVNVSH IHDLSFGPKYPG+HNPLD T R
Sbjct: 177 VLDVQRVAGNFHISVHGLNIYVAQMIFDGAKNVNVSHFIHDLSFGPKYPGLHNPLDDTTR 236

Query: 181 MLHDTSGTFKYYIKVWP 197
           +LHDTSGTFKYYIKV P
Sbjct: 237 ILHDTSGTFKYYIKVVP 253

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255637400|gb|ACU19028.1| unknown [Glycine max]

 Score =  344 bits (882), Expect = 1e-92,   Method: Compositional matrix adjust.
 Identities = 166/197 (84%), Positives = 179/197 (90%), Gaps = 1/197 (0%)

Query: 1   MSVDLKRGETLPIHINMTFPALPCDVLSVDAIDMSGKHEVDLDTNIWKLRLNSYGHIIGT 60
           MSVDLKRGETLPIHINMTFP+LPCDVLSVDAIDMSGKHEVDLDTNIWKLRLNSYGHIIGT
Sbjct: 58  MSVDLKRGETLPIHINMTFPSLPCDVLSVDAIDMSGKHEVDLDTNIWKLRLNSYGHIIGT 117

Query: 61  EYLTDLVEKEHEEHKHDHNKDHKDDIDEKLHAFGFDEDAENMIKKVKHALESGEGCRVYG 120
           EY++DLVEKEH  HKHD NK+H+   ++K+H    DE  EN+IKKVK AL++GEGCRVYG
Sbjct: 118 EYVSDLVEKEHTHHKHDDNKNHEHS-EQKIHLQNLDESTENIIKKVKEALKNGEGCRVYG 176

Query: 121 VLDVQRVAGNFHISVHGLNIYVAQMIFGGAKNVNVSHVIHDLSFGPKYPGIHNPLDGTVR 180
           VLDVQRVAGNFHISVHGLNIYVAQMIF GAKNVNVSH IHDLSFGPKYPG+HNPLD T R
Sbjct: 177 VLDVQRVAGNFHISVHGLNIYVAQMIFDGAKNVNVSHFIHDLSFGPKYPGLHNPLDDTTR 236

Query: 181 MLHDTSGTFKYYIKVWP 197
           +LHDTSGTFKYYIKV P
Sbjct: 237 ILHDTSGTFKYYIKVVP 253

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297830940|ref|XP_002883352.1| hypothetical protein ARALYDRAFT_479742 [Arabidopsis lyrata subsp. lyrata] gi|297329192|gb|EFH59611.1| hypothetical protein ARALYDRAFT_479742 [Arabidopsis lyrata subsp. lyrata]

 Score =  338 bits (868), Expect = 6e-91,   Method: Compositional matrix adjust.
 Identities = 165/202 (81%), Positives = 181/202 (89%), Gaps = 5/202 (2%)

Query: 1   MSVDLKRGETLPIHINMTFPALPCDVLSVDAIDMSGKHEVDLDTNIWKLRLNSYGHIIGT 60
           MSVDLKRGETLPIH+NMTFP+LPCDVLSVDAIDMSGKHEVDLDTNIWKLRLNS+GHIIGT
Sbjct: 58  MSVDLKRGETLPIHVNMTFPSLPCDVLSVDAIDMSGKHEVDLDTNIWKLRLNSHGHIIGT 117

Query: 61  EYLTDLVEKEHE----EHKHDHNKDHKDDID-EKLHAFGFDEDAENMIKKVKHALESGEG 115
           EY++DLVEK HE     HKHD  ++HK++ + E L+  GFD+ AE MIKKVK AL  GEG
Sbjct: 118 EYISDLVEKGHEHGHSPHKHDGKEEHKNETETEALNILGFDQAAETMIKKVKQALADGEG 177

Query: 116 CRVYGVLDVQRVAGNFHISVHGLNIYVAQMIFGGAKNVNVSHVIHDLSFGPKYPGIHNPL 175
           CRVYGVLDVQRVAGNFHISVHGLNIYVAQMIFGG+KNVNVSH+IHDLSFGPKYPGIHNPL
Sbjct: 178 CRVYGVLDVQRVAGNFHISVHGLNIYVAQMIFGGSKNVNVSHMIHDLSFGPKYPGIHNPL 237

Query: 176 DGTVRMLHDTSGTFKYYIKVWP 197
           D T R+LHDTSGTFKYYIK+ P
Sbjct: 238 DDTNRILHDTSGTFKYYIKIVP 259

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|11036454|dbj|BAB17274.1| unnamed protein product [Arabidopsis thaliana]

 Score =  338 bits (868), Expect = 6e-91,   Method: Compositional matrix adjust.
 Identities = 165/202 (81%), Positives = 181/202 (89%), Gaps = 5/202 (2%)

Query: 1   MSVDLKRGETLPIHINMTFPALPCDVLSVDAIDMSGKHEVDLDTNIWKLRLNSYGHIIGT 60
           MSVDLKRGETLPIH+NMTFP+LPCDVLSVDAIDMSGKHEVDLDTNIWKLRLNS+GHIIGT
Sbjct: 58  MSVDLKRGETLPIHVNMTFPSLPCDVLSVDAIDMSGKHEVDLDTNIWKLRLNSHGHIIGT 117

Query: 61  EYLTDLVEKEHE----EHKHDHNKDHKDDID-EKLHAFGFDEDAENMIKKVKHALESGEG 115
           EY++DLVEK HE     HKHD  ++HK++ + E L+  GFD+ AE MIKKVK AL  GEG
Sbjct: 118 EYISDLVEKGHEHGHSPHKHDGKEEHKNETETEALNILGFDQAAETMIKKVKQALADGEG 177

Query: 116 CRVYGVLDVQRVAGNFHISVHGLNIYVAQMIFGGAKNVNVSHVIHDLSFGPKYPGIHNPL 175
           CRVYGVLDVQRVAGNFHISVHGLNIYVAQMIFGG+KNVNVSH+IHDLSFGPKYPGIHNPL
Sbjct: 178 CRVYGVLDVQRVAGNFHISVHGLNIYVAQMIFGGSKNVNVSHMIHDLSFGPKYPGIHNPL 237

Query: 176 DGTVRMLHDTSGTFKYYIKVWP 197
           D T R+LHDTSGTFKYYIK+ P
Sbjct: 238 DDTNRILHDTSGTFKYYIKIVP 259

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|30686584|ref|NP_188868.2| Endoplasmic reticulum vesicle transporter protein [Arabidopsis thaliana] gi|13877821|gb|AAK43988.1|AF370173_1 unknown protein [Arabidopsis thaliana] gi|51969000|dbj|BAD43192.1| unknown protein [Arabidopsis thaliana] gi|51970108|dbj|BAD43746.1| unknown protein [Arabidopsis thaliana] gi|51970556|dbj|BAD43970.1| unknown protein [Arabidopsis thaliana] gi|51970734|dbj|BAD44059.1| unknown protein [Arabidopsis thaliana] gi|62319967|dbj|BAD94071.1| hypothetical protein [Arabidopsis thaliana] gi|332643097|gb|AEE76618.1| Endoplasmic reticulum vesicle transporter protein [Arabidopsis thaliana]

 Score =  338 bits (868), Expect = 6e-91,   Method: Compositional matrix adjust.
 Identities = 165/202 (81%), Positives = 181/202 (89%), Gaps = 5/202 (2%)

Query: 1   MSVDLKRGETLPIHINMTFPALPCDVLSVDAIDMSGKHEVDLDTNIWKLRLNSYGHIIGT 60
           MSVDLKRGETLPIH+NMTFP+LPCDVLSVDAIDMSGKHEVDLDTNIWKLRLNS+GHIIGT
Sbjct: 58  MSVDLKRGETLPIHVNMTFPSLPCDVLSVDAIDMSGKHEVDLDTNIWKLRLNSHGHIIGT 117

Query: 61  EYLTDLVEKEHE----EHKHDHNKDHKDDID-EKLHAFGFDEDAENMIKKVKHALESGEG 115
           EY++DLVEK HE     HKHD  ++HK++ + E L+  GFD+ AE MIKKVK AL  GEG
Sbjct: 118 EYISDLVEKGHEHGHSPHKHDGKEEHKNETETEALNILGFDQAAETMIKKVKQALADGEG 177

Query: 116 CRVYGVLDVQRVAGNFHISVHGLNIYVAQMIFGGAKNVNVSHVIHDLSFGPKYPGIHNPL 175
           CRVYGVLDVQRVAGNFHISVHGLNIYVAQMIFGG+KNVNVSH+IHDLSFGPKYPGIHNPL
Sbjct: 178 CRVYGVLDVQRVAGNFHISVHGLNIYVAQMIFGGSKNVNVSHMIHDLSFGPKYPGIHNPL 237

Query: 176 DGTVRMLHDTSGTFKYYIKVWP 197
           D T R+LHDTSGTFKYYIK+ P
Sbjct: 238 DDTNRILHDTSGTFKYYIKIVP 259

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224086657|ref|XP_002307923.1| predicted protein [Populus trichocarpa] gi|222853899|gb|EEE91446.1| predicted protein [Populus trichocarpa]

 Score =  328 bits (841), Expect = 7e-88,   Method: Compositional matrix adjust.
 Identities = 165/197 (83%), Positives = 179/197 (90%)

Query: 1   MSVDLKRGETLPIHINMTFPALPCDVLSVDAIDMSGKHEVDLDTNIWKLRLNSYGHIIGT 60
           MSVDL RGETLPIHIN+TFP+LPCDVLSVDAIDMSGKHEVDLDT+IWKLRLNSYGHI GT
Sbjct: 58  MSVDLTRGETLPIHINITFPSLPCDVLSVDAIDMSGKHEVDLDTSIWKLRLNSYGHITGT 117

Query: 61  EYLTDLVEKEHEEHKHDHNKDHKDDIDEKLHAFGFDEDAENMIKKVKHALESGEGCRVYG 120
           EYL+DLVEKEHE H HDHNKDH +D   K H  GFD+ AE M+KKVK AL +GEGCRVYG
Sbjct: 118 EYLSDLVEKEHEAHNHDHNKDHHEDSHAKQHTHGFDDAAETMVKKVKQALANGEGCRVYG 177

Query: 121 VLDVQRVAGNFHISVHGLNIYVAQMIFGGAKNVNVSHVIHDLSFGPKYPGIHNPLDGTVR 180
           VLDVQRVAGNFHISVHGLNI+VAQMIF GAK+VNVSH+IHDLSFGPKYPGIHNPLDGT R
Sbjct: 178 VLDVQRVAGNFHISVHGLNIFVAQMIFDGAKHVNVSHIIHDLSFGPKYPGIHNPLDGTTR 237

Query: 181 MLHDTSGTFKYYIKVWP 197
           +LH+TSGTFKYYIK+ P
Sbjct: 238 ILHETSGTFKYYIKIVP 254

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225446891|ref|XP_002284045.1| PREDICTED: endoplasmic reticulum-Golgi intermediate compartment protein 3 [Vitis vinifera] gi|296086333|emb|CBI31774.3| unnamed protein product [Vitis vinifera]

 Score =  327 bits (837), Expect = 2e-87,   Method: Compositional matrix adjust.
 Identities = 167/197 (84%), Positives = 180/197 (91%)

Query: 1   MSVDLKRGETLPIHINMTFPALPCDVLSVDAIDMSGKHEVDLDTNIWKLRLNSYGHIIGT 60
           MSVDLKRGETLPIHINMTFP+LPCDVLSVDAIDMSGKHEVDLDTNIWKLRLN  G IIGT
Sbjct: 58  MSVDLKRGETLPIHINMTFPSLPCDVLSVDAIDMSGKHEVDLDTNIWKLRLNRDGFIIGT 117

Query: 61  EYLTDLVEKEHEEHKHDHNKDHKDDIDEKLHAFGFDEDAENMIKKVKHALESGEGCRVYG 120
           EYL+DLVEKEH +HKHDHNKDH  D D+KLHA  FD+DAENM+KKVK AL +GEGCRVYG
Sbjct: 118 EYLSDLVEKEHADHKHDHNKDHHGDSDQKLHAHSFDQDAENMVKKVKQALANGEGCRVYG 177

Query: 121 VLDVQRVAGNFHISVHGLNIYVAQMIFGGAKNVNVSHVIHDLSFGPKYPGIHNPLDGTVR 180
           VLDVQRVAGNFHISVHGLNI+VAQMIF GA +VNVSH+IHDLSFGPKYPG+HNPLDGTVR
Sbjct: 178 VLDVQRVAGNFHISVHGLNIFVAQMIFDGAIHVNVSHIIHDLSFGPKYPGLHNPLDGTVR 237

Query: 181 MLHDTSGTFKYYIKVWP 197
           +L   SGTFKYYIK+ P
Sbjct: 238 ILRGASGTFKYYIKIVP 254

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356547537|ref|XP_003542168.1| PREDICTED: probable endoplasmic reticulum-Golgi intermediate compartment protein 3-like [Glycine max]

 Score =  327 bits (837), Expect = 2e-87,   Method: Compositional matrix adjust.
 Identities = 161/200 (80%), Positives = 175/200 (87%), Gaps = 3/200 (1%)

Query: 1   MSVDLKRGETLPIHINMTFPALPCDVLSVDAIDMSGKHEVDLDTNIWKLRLNSYGHIIGT 60
           MSVDLKRGETLPIHINMTFP+LPCDVLSVDAIDMSGKHEVDLDTNIWKLRLNSYGHIIGT
Sbjct: 58  MSVDLKRGETLPIHINMTFPSLPCDVLSVDAIDMSGKHEVDLDTNIWKLRLNSYGHIIGT 117

Query: 61  EYLTDLVEKEH---EEHKHDHNKDHKDDIDEKLHAFGFDEDAENMIKKVKHALESGEGCR 117
           EY++DLVEKEH   E   +  +  H +  ++K+H    DE  EN+IKKVK AL++GEGCR
Sbjct: 118 EYISDLVEKEHTNQEHDDNKDHDHHHEHSEQKIHLQNLDESTENIIKKVKEALKNGEGCR 177

Query: 118 VYGVLDVQRVAGNFHISVHGLNIYVAQMIFGGAKNVNVSHVIHDLSFGPKYPGIHNPLDG 177
           VYGVLDVQRVAGNFHISVHGLNIYVAQMIF GAKNVNVSH IHDLSFGPKYPG+HNPLD 
Sbjct: 178 VYGVLDVQRVAGNFHISVHGLNIYVAQMIFDGAKNVNVSHFIHDLSFGPKYPGLHNPLDD 237

Query: 178 TVRMLHDTSGTFKYYIKVWP 197
           T R+LHDTSGTFKYYIKV P
Sbjct: 238 TTRILHDTSGTFKYYIKVVP 257

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224137484|ref|XP_002322569.1| predicted protein [Populus trichocarpa] gi|222867199|gb|EEF04330.1| predicted protein [Populus trichocarpa]

 Score =  321 bits (822), Expect = 1e-85,   Method: Compositional matrix adjust.
 Identities = 161/197 (81%), Positives = 177/197 (89%)

Query: 1   MSVDLKRGETLPIHINMTFPALPCDVLSVDAIDMSGKHEVDLDTNIWKLRLNSYGHIIGT 60
           MSVDL+RGE LPIH+N+TFP+LPCDVLSVDAIDMSGKHEVDLDTNIWKLRLNS+GHI GT
Sbjct: 58  MSVDLQRGEILPIHVNITFPSLPCDVLSVDAIDMSGKHEVDLDTNIWKLRLNSHGHITGT 117

Query: 61  EYLTDLVEKEHEEHKHDHNKDHKDDIDEKLHAFGFDEDAENMIKKVKHALESGEGCRVYG 120
           EYL+DLVEKEHE H HDH+KDH  D  E+ H  GFD+ AE MIKKVK AL +GEGCRVYG
Sbjct: 118 EYLSDLVEKEHEAHNHDHDKDHHKDSHEEQHTHGFDDAAETMIKKVKQALANGEGCRVYG 177

Query: 121 VLDVQRVAGNFHISVHGLNIYVAQMIFGGAKNVNVSHVIHDLSFGPKYPGIHNPLDGTVR 180
           VLDVQRVAGNFHISVHGLNI+VAQMIF GAK+VNVSH+IHDLSFGPKYPGIHNPLDGT R
Sbjct: 178 VLDVQRVAGNFHISVHGLNIFVAQMIFDGAKHVNVSHIIHDLSFGPKYPGIHNPLDGTAR 237

Query: 181 MLHDTSGTFKYYIKVWP 197
           +L +TSG FKYYIK+ P
Sbjct: 238 ILRETSGIFKYYIKIVP 254

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449445069|ref|XP_004140296.1| PREDICTED: endoplasmic reticulum-Golgi intermediate compartment protein 3-like [Cucumis sativus]

 Score =  317 bits (812), Expect = 2e-84,   Method: Compositional matrix adjust.
 Identities = 163/197 (82%), Positives = 179/197 (90%), Gaps = 3/197 (1%)

Query: 1   MSVDLKRGETLPIHINMTFPALPCDVLSVDAIDMSGKHEVDLDTNIWKLRLNSYGHIIGT 60
           MSVDLKRGETLPIHINMTFP+LPCDVLSVDAIDMSGKHEVDLDTNIWKLRLNS+G IIGT
Sbjct: 100 MSVDLKRGETLPIHINMTFPSLPCDVLSVDAIDMSGKHEVDLDTNIWKLRLNSHGQIIGT 159

Query: 61  EYLTDLVEKEHEEHKHDHNKDHKDDIDEKLHAFGFDEDAENMIKKVKHALESGEGCRVYG 120
           EYL+DLVEKEH +HKHDH+ D + D     H  GFD+ AEN++KKVK ALE  +GCRVYG
Sbjct: 160 EYLSDLVEKEHVDHKHDHDHDKEKDHP---HIHGFDQAAENLVKKVKQALEEAQGCRVYG 216

Query: 121 VLDVQRVAGNFHISVHGLNIYVAQMIFGGAKNVNVSHVIHDLSFGPKYPGIHNPLDGTVR 180
           VLDVQRVAGNFHISVHGLNI+VAQMIFGG+K+VNVSH+IHDLSFGPKYPGIHNPLDGTVR
Sbjct: 217 VLDVQRVAGNFHISVHGLNIFVAQMIFGGSKHVNVSHMIHDLSFGPKYPGIHNPLDGTVR 276

Query: 181 MLHDTSGTFKYYIKVWP 197
           +L DTSGTFKYYIK+ P
Sbjct: 277 ILRDTSGTFKYYIKIVP 293

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	201
TAIR|locus:2087817	354	AT3G22290 "AT3G22290" [Arabido	0.980	0.556	0.762	3.3e-79
TAIR|locus:2015056	386	AT1G22200 "AT1G22200" [Arabido	0.477	0.248	0.421	7.1e-28
UNIPROTKB|Q5EAE0	383	ERGIC3 "Endoplasmic reticulum-	0.432	0.227	0.439	3.4e-27
TAIR|locus:2034330	489	AT1G36050 "AT1G36050" [Arabido	0.472	0.194	0.398	4.4e-27
ZFIN|ZDB-GENE-040426-795	383	ergic3 "ERGIC and golgi 3" [Da	0.432	0.227	0.417	1.6e-26
UNIPROTKB|Q9Y282	383	ERGIC3 "Endoplasmic reticulum-	0.432	0.227	0.439	1.9e-26
MGI|MGI:1913616	383	Ergic3 "ERGIC and golgi 3" [Mu	0.432	0.227	0.439	2.4e-26
DICTYBASE|DDB_G0292002	383	ergic3 "endoplasmic reticulum-	0.422	0.221	0.419	2.6e-25
POMBASE|SPAC24B11.08c	390	SPAC24B11.08c "COPII-coated ve	0.492	0.253	0.348	8.8e-20
WB|WBGene00010725	380	erv-46 [Caenorhabditis elegans	0.467	0.247	0.373	7.9e-18

TAIR|locus:2087817 AT3G22290 "AT3G22290" [Arabidopsis thaliana (taxid:3702)]

 Score = 796 (285.3 bits), Expect = 3.3e-79, P = 3.3e-79
 Identities = 154/202 (76%), Positives = 165/202 (81%)

Query:     1 MSVDLKRGETLPIHINMTFPALPCDVLSVDAIDMSGKHEVDLDTNIWKLRLNSYGHIIGT 60
             MSVDLKRGETLPIH+NMTFP+LPCDVLSVDAIDMSGKHEVDLDTNIWKLRLNS+GHIIGT
Sbjct:    58 MSVDLKRGETLPIHVNMTFPSLPCDVLSVDAIDMSGKHEVDLDTNIWKLRLNSHGHIIGT 117

Query:    61 EYLTDLVXXXXXXXXX-----XXXXXXXXXXXXXLHAFGFDEDAENMIKKVKHALESGEG 115
             EY++DLV                           L+  GFD+ AE MIKKVK AL  GEG
Sbjct:   118 EYISDLVEKGHEHGHSPHKHDGKEEHKNETETEALNILGFDQAAETMIKKVKQALADGEG 177

Query:   116 CRVYGVLDVQRVAGNFHISVHGLNIYVAQMIFGGAKNVNVSHVIHDLSFGPKYPGIHNPL 175
             CRVYGVLDVQRVAGNFHISVHGLNIYVAQMIFGG+KNVNVSH+IHDLSFGPKYPGIHNPL
Sbjct:   178 CRVYGVLDVQRVAGNFHISVHGLNIYVAQMIFGGSKNVNVSHMIHDLSFGPKYPGIHNPL 237

Query:   176 DGTVRMLHDTSGTFKYYIKVWP 197
             D T R+LHDTSGTFKYYIK+ P
Sbjct:   238 DDTNRILHDTSGTFKYYIKIVP 259

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0005783 "endoplasmic reticulum" evidence=IDA

TAIR|locus:2015056 AT1G22200 "AT1G22200" [Arabidopsis thaliana (taxid:3702)]

 Score = 198 (74.8 bits), Expect = 7.1e-28, Sum P(2) = 7.1e-28
 Identities = 43/102 (42%), Positives = 58/102 (56%)

Query:   100 ENMIKKVKHALESGEGCRVYGVLDVQRVAGNFHI----SVHGLNIYVAQMIFGGAKNVNV 155
             E  ++KVK   E GEGC V+G L+V +VAGNFH     S H        M+     N N+
Sbjct:   189 EGFVQKVKD--EEGEGCNVHGFLEVNKVAGNFHFIPGQSFHQSGFQFHDMLLFQQGNYNI 246

Query:   156 SHVIHDLSFGPKYPGIHNPLDGTVRMLHDTSGTFKYYIKVWP 197
             SH ++ L+FG  +PG+ NPLDG        SG ++Y+IKV P
Sbjct:   247 SHKVNRLAFGDFFPGVVNPLDGVQWNQGKQSGVYQYFIKVVP 288

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0005783 "endoplasmic reticulum" evidence=IDA

GO:0006626 "protein targeting to mitochondrion" evidence=RCA

GO:0030968 "endoplasmic reticulum unfolded protein response" evidence=RCA

UNIPROTKB|Q5EAE0 ERGIC3 "Endoplasmic reticulum-Golgi intermediate compartment protein 3" [Bos taurus (taxid:9913)]

 Score = 190 (71.9 bits), Expect = 3.4e-27, Sum P(2) = 3.4e-27
 Identities = 40/91 (43%), Positives = 54/91 (59%)

Query:   111 ESGEGCRVYGVLDVQRVAGNFHI----SVHGLNIYVAQMIFGGAKNVNVSHVIHDLSFGP 166
             +  EGC+VYG L+V +VAGNFH     S    +++V  +   G  N+N++H I  LSFG 
Sbjct:   194 QKNEGCQVYGFLEVNKVAGNFHFAPGKSFQQSHVHVHDLQSFGLDNINMTHYIRHLSFGE 253

Query:   167 KYPGIHNPLDGTVRMLHDTSGTFKYYIKVWP 197
              YPGI NPLD T       S  F+Y++KV P
Sbjct:   254 DYPGIVNPLDHTNVTAPQASMMFQYFVKVVP 284

GO:0033116 "endoplasmic reticulum-Golgi intermediate compartment membrane" evidence=IEA

GO:0005794 "Golgi apparatus" evidence=IEA

GO:0005789 "endoplasmic reticulum membrane" evidence=IEA

GO:0016192 "vesicle-mediated transport" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

TAIR|locus:2034330 AT1G36050 "AT1G36050" [Arabidopsis thaliana (taxid:3702)]

 Score = 189 (71.6 bits), Expect = 4.4e-27, Sum P(2) = 4.4e-27
 Identities = 41/103 (39%), Positives = 62/103 (60%)

Query:   100 ENMIKKVKHALESGEGCRVYGVLDVQRVAGNFHI----SVHGLNIYVAQMIFGGAKNVNV 155
             E  +++VK   E GEGC +YG L+V +VAGNFH     S H   ++V  ++     + N+
Sbjct:   189 EGFLQRVKD--EEGEGCNIYGFLEVNKVAGNFHFAPGKSFHQSGVHVHDLLAFQKDSFNI 246

Query:   156 SHVIHDLSFGPKYPGIHNPLDGTVRMLHDT-SGTFKYYIKVWP 197
             SH I+ L++G  +PG+ NPLD  V    DT +  ++Y+IKV P
Sbjct:   247 SHKINRLTYGDYFPGVVNPLD-KVEWSQDTPNAMYQYFIKVVP 288

GO:0003674 "molecular_function" evidence=ND

GO:0005774 "vacuolar membrane" evidence=IDA

GO:0005794 "Golgi apparatus" evidence=IDA

GO:0005783 "endoplasmic reticulum" evidence=IDA

ZFIN|ZDB-GENE-040426-795 ergic3 "ERGIC and golgi 3" [Danio rerio (taxid:7955)]

 Score = 186 (70.5 bits), Expect = 1.6e-26, Sum P(2) = 1.6e-26
 Identities = 38/91 (41%), Positives = 54/91 (59%)

Query:   111 ESGEGCRVYGVLDVQRVAGNFHI----SVHGLNIYVAQMIFGGAKNVNVSHVIHDLSFGP 166
             +  EGC+VYG L+V +VAGNFH     S    +++V  +   G  N+N++H I  LSFG 
Sbjct:   194 QKNEGCQVYGFLEVNKVAGNFHFAPGKSFQQSHVHVHDLQSFGLDNINMTHFIKHLSFGK 253

Query:   167 KYPGIHNPLDGTVRMLHDTSGTFKYYIKVWP 197
              YPGI NPLD T       S  ++Y++K+ P
Sbjct:   254 DYPGIVNPLDDTNVAAPQASMMYQYFVKIVP 284

GO:0003674 "molecular_function" evidence=ND

GO:0005783 "endoplasmic reticulum" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0005794 "Golgi apparatus" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0016192 "vesicle-mediated transport" evidence=IEA

GO:0006810 "transport" evidence=IEA

GO:0005789 "endoplasmic reticulum membrane" evidence=IEA

GO:0033116 "endoplasmic reticulum-Golgi intermediate compartment membrane" evidence=IEA

UNIPROTKB|Q9Y282 ERGIC3 "Endoplasmic reticulum-Golgi intermediate compartment protein 3" [Homo sapiens (taxid:9606)]

 Score = 190 (71.9 bits), Expect = 1.9e-26, Sum P(2) = 1.9e-26
 Identities = 40/91 (43%), Positives = 54/91 (59%)

Query:   111 ESGEGCRVYGVLDVQRVAGNFHI----SVHGLNIYVAQMIFGGAKNVNVSHVIHDLSFGP 166
             +  EGC+VYG L+V +VAGNFH     S    +++V  +   G  N+N++H I  LSFG 
Sbjct:   194 QKNEGCQVYGFLEVNKVAGNFHFAPGKSFQQSHVHVHDLQSFGLDNINMTHYIQHLSFGE 253

Query:   167 KYPGIHNPLDGTVRMLHDTSGTFKYYIKVWP 197
              YPGI NPLD T       S  F+Y++KV P
Sbjct:   254 DYPGIVNPLDHTNVTAPQASMMFQYFVKVVP 284

GO:0016021 "integral to membrane" evidence=IEA

GO:0016192 "vesicle-mediated transport" evidence=IEA

GO:0005789 "endoplasmic reticulum membrane" evidence=IEA

GO:0005794 "Golgi apparatus" evidence=IEA

GO:0033116 "endoplasmic reticulum-Golgi intermediate compartment membrane" evidence=IEA

MGI|MGI:1913616 Ergic3 "ERGIC and golgi 3" [Mus musculus (taxid:10090)]

 Score = 189 (71.6 bits), Expect = 2.4e-26, Sum P(2) = 2.4e-26
 Identities = 40/91 (43%), Positives = 54/91 (59%)

Query:   111 ESGEGCRVYGVLDVQRVAGNFHI----SVHGLNIYVAQMIFGGAKNVNVSHVIHDLSFGP 166
             +  EGC+VYG L+V +VAGNFH     S    +++V  +   G  N+N++H I  LSFG 
Sbjct:   194 QKNEGCQVYGFLEVNKVAGNFHFAPGKSFQQSHVHVHDLQSFGLDNINMTHYIKHLSFGE 253

Query:   167 KYPGIHNPLDGTVRMLHDTSGTFKYYIKVWP 197
              YPGI NPLD T       S  F+Y++KV P
Sbjct:   254 DYPGIVNPLDHTNVTAPQASMMFQYFVKVVP 284

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0005783 "endoplasmic reticulum" evidence=IEA

GO:0005794 "Golgi apparatus" evidence=IEA

GO:0006810 "transport" evidence=IEA

GO:0008150 "biological_process" evidence=ND

GO:0016020 "membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0016192 "vesicle-mediated transport" evidence=IEA

DICTYBASE|DDB_G0292002 ergic3 "endoplasmic reticulum-golgi intermediate compartment protein 3" [Dictyostelium discoideum (taxid:44689)]

 Score = 178 (67.7 bits), Expect = 2.6e-25, Sum P(2) = 2.6e-25
 Identities = 39/93 (41%), Positives = 56/93 (60%)

Query:   111 ESGEGCRVYGVLDVQRVAGNFHISV------HGLNIYVAQMIFGGAKNVNVSHVIHDLSF 164
             ++GEGC+VYG + V +VAGNFH +       H ++++  Q    G+   NVSH I+ LSF
Sbjct:   193 QNGEGCQVYGFILVNKVAGNFHFAPGKSFQQHHMHVHDLQPFKDGS--FNVSHTINRLSF 250

Query:   165 GPKYPGIHNPLDGTVRMLHDTSGTFKYYIKVWP 197
             G  +PGI NPLD   +      G F+Y++KV P
Sbjct:   251 GNDFPGIKNPLDDVTKTEMVGVGMFQYFVKVVP 283

GO:0003674 "molecular_function" evidence=ND

GO:0016192 "vesicle-mediated transport" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0006810 "transport" evidence=IEA

GO:0005794 "Golgi apparatus" evidence=IEA

GO:0005783 "endoplasmic reticulum" evidence=IEA

GO:0033116 "endoplasmic reticulum-Golgi intermediate compartment membrane" evidence=IEA

GO:0005789 "endoplasmic reticulum membrane" evidence=IEA

GO:0044351 "macropinocytosis" evidence=RCA

POMBASE|SPAC24B11.08c SPAC24B11.08c "COPII-coated vesicle component Erv46 (predicted)" [Schizosaccharomyces pombe (taxid:4896)]

 Score = 138 (53.6 bits), Expect = 8.8e-20, Sum P(2) = 8.8e-20
 Identities = 38/109 (34%), Positives = 55/109 (50%)

Query:    95 FDEDAENMIKKVKHALESGEGCRVYGVLDVQRVAGNFHISVHGLNIYVAQMIFGGAKNVN 154
             F +  +   K++  A +  EGC + G L V R+AGNFHI+         Q +      +N
Sbjct:   177 FKQCKDENFKELYEA-QKVEGCNLAGQLSVNRMAGNFHIAPGRSTQNGNQHVHDTRDYIN 235

Query:   155 ------VSHVIHDLSFGPKYPG-IH--NPLDGTVRMLHDTSGTFKYYIK 194
                   +SH IH LSFGP     +H  NPLDGTV+ +      ++Y+IK
Sbjct:   236 ELDLHDMSHSIHHLSFGPPLDASVHYSNPLDGTVKKVSTADYRYEYFIK 284

GO:0000139 "Golgi membrane" evidence=ISO

GO:0003674 "molecular_function" evidence=ND

GO:0005783 "endoplasmic reticulum" evidence=IDA

GO:0005789 "endoplasmic reticulum membrane" evidence=ISO

GO:0006886 "intracellular protein transport" evidence=ISO

GO:0006888 "ER to Golgi vesicle-mediated transport" evidence=ISO

GO:0016021 "integral to membrane" evidence=IEA

GO:0030134 "ER to Golgi transport vesicle" evidence=ISO

WB|WBGene00010725 erv-46 [Caenorhabditis elegans (taxid:6239)]

 Score = 152 (58.6 bits), Expect = 7.9e-18, Sum P(2) = 7.9e-18
 Identities = 37/99 (37%), Positives = 54/99 (54%)

Query:   104 KKVKHALE-SGEGCRVYGVLDVQRVAGNFHISV---H-GLNIYVAQMIFGGAKNVNVSHV 158
             K VK   E   EGCRVYG + V +VAGNFH++    H  +  +V  +        + SH 
Sbjct:   185 KWVKEFNEHKNEGCRVYGTVKVAKVAGNFHLAPGDPHQAMRSHVHDLHNLDPVKFDASHT 244

Query:   159 IHDLSFGPKYPGIHNPLDGTVRMLHDTSGTFKYYIKVWP 197
             ++ +SFG  +PG + PLDG V   +     ++YY+KV P
Sbjct:   245 VNHVSFGKSFPGKNYPLDGKVNTDNRGGIMYQYYVKVVP 283

GO:0016021 "integral to membrane" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	201
pfam13850	105	pfam13850, ERGIC_N, Endoplasmic Reticulum-Golgi In	3e-22
pfam07970	222	pfam07970, COPIIcoated_ERV, Endoplasmic reticulum	7e-22

>gnl|CDD|206021 pfam13850, ERGIC_N, Endoplasmic Reticulum-Golgi Intermediate Compartment (ERGIC)

 Score = 86.0 bits (214), Expect = 3e-22
 Identities = 28/53 (52%), Positives = 43/53 (81%)

Query: 1   MSVDLKRGETLPIHINMTFPALPCDVLSVDAIDMSGKHEVDLDTNIWKLRLNS 53
           + VD  RGE L I++++TFP LPCD+LS+D +D+SG+H++D++ NI K RL+S
Sbjct: 53  LVVDTSRGEKLRINLDITFPRLPCDLLSLDVMDVSGEHQLDVEHNIKKTRLDS 105

This family is the N-terminal of ERGIC proteins, ER-Golgi intermediate compartment clusters, otherwise known as Ervs, and is associated with family COPIIcoated_ERV, pfam07970. Length = 105

>gnl|CDD|219673 pfam07970, COPIIcoated_ERV, Endoplasmic reticulum vesicle transporter

 Score = 88.5 bits (220), Expect = 7e-22
 Identities = 40/102 (39%), Positives = 54/102 (52%), Gaps = 9/102 (8%)

Query: 104 KKVKHALESGEGCRVYGVLDVQRVAGNFHISVHGLNIYVAQMIF-----GGAKNVNVSHV 158
           +K+K    S EGCRV G L+V RVAGNFHI+  G +                + +N SH 
Sbjct: 44  EKLKAQKNSNEGCRVKGTLEVNRVAGNFHIA-PGRSFQEKGGHVHDLSLFTDEKLNFSHT 102

Query: 159 IHDLSFGPKYP-GIHNPLDGT--VRMLHDTSGTFKYYIKVWP 197
           I+ LSFG ++P G+ NPLDGT            + Y++KV P
Sbjct: 103 INHLSFGEEFPGGVTNPLDGTTKFVQTDKGYHMYSYFLKVVP 144

This family is conserved from plants and fungi to humans. Erv46 works in close conjunction with Erv41 and together they form a complex which cycles between the endoplasmic reticulum and Golgi complex. Erv46-41 interacts strongly with the endoplasmic reticulum glucosidase II. Mammalian glucosidase II comprises a catalytic alpha-subunit and a 58 kDa beta subunit, which is required for ER localisation. All proteins identified biochemically as Erv41p-Erv46p interactors are localised to the early secretory pathway and are involved in protein maturation and processing in the ER and/or sorting into COPII vesicles for transport to the Golgi. Length = 222

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	201
KOG2667	379	consensus COPII vesicle protein [Intracellular tra	100.0
PF07970	222	COPIIcoated_ERV: Endoplasmic reticulum vesicle tra	100.0
PF13850	96	ERGIC_N: Endoplasmic Reticulum-Golgi Intermediate	99.56

>KOG2667 consensus COPII vesicle protein [Intracellular trafficking, secretion, and vesicular transport]

Probab=100.00  E-value=2e-50  Score=350.80  Aligned_cols=198  Identities=36%  Similarity=0.550  Sum_probs=142.2

Q ss_pred             CeecCCCCCeeeEEEEEEeCccCCCeeeeeeeecCCCceeccCCceEEEEecCCCceeeee----------eecchhh-h
Q 028969            1 MSVDLKRGETLPIHINMTFPALPCDVLSVDAIDMSGKHEVDLDTNIWKLRLNSYGHIIGTE----------YLTDLVE-K   69 (201)
Q Consensus         1 ~~VD~~~~~kl~In~DItfp~~PC~~lslDv~D~~G~~~~dv~~~i~k~rld~~g~~i~~~----------~~~~~~~-~   69 (201)
                      ++||.+++++|+||||||||+|||++|+|||||.+|+.++++.++|+|.|+|.  +++...          ...+... .
T Consensus        58 ~~vd~s~~e~l~in~DItfp~lpC~~lsVDv~D~sg~~~l~i~~~i~k~rl~~--~~i~~~~~~~~~~~~k~~~p~~~~~  135 (379)
T KOG2667|consen   58 LFVDDSRDEKLQINFDITFPALPCSILSVDVMDVSGEMVLDIDHLIYKLRLDP--EPIPLTIRRFDIFQHKQTIPTTDPI  135 (379)
T ss_pred             EEEeCCCCceeeeeeeEEeccCccceEEEEeeccccccccchhhhhhhcccCc--cccccchhhhcccccccccCCCCcc
Confidence            57999999999999999999999999999999999999999999999999998  333310          0000001 1


Q ss_pred             hhhcc----c----CCCCCCChhhHH--HhhhccCCC--CchHHHHHHH---HhhccCCCccEEEEEEEEEeeeeEEEEe
Q 028969           70 EHEEH----K----HDHNKDHKDDID--EKLHAFGFD--EDAENMIKKV---KHALESGEGCRVYGVLDVQRVAGNFHIS  134 (201)
Q Consensus        70 ~~~~~----~----~~~~~~~~~~~~--~~~~~~~~~--~~~~~~~~~~---~~~~~~~egCri~G~l~VnkV~G~fhi~  134 (201)
                      .|+.+    .    ...||..|+.+.  ++..+|.+.  ...+++....   ......+|||||+|++.||||||||||+
T Consensus       136 ~c~~~~~~~~~~~~~~~~~~~~~~v~~a~~~~g~~~~~~~~~~q~~~~~~~~~~~~~~geGCRi~G~l~VNKVaGnfHia  215 (379)
T KOG2667|consen  136 LCGLCYGAEDFNDGDIDCCNLCEDVREAYRKAGWDFADEDLIDQCKNEGFTNKAAEQKGEGCRIYGQLEVNKVAGNFHIA  215 (379)
T ss_pred             chhhhhhhhccccccchhhhcchHHHHHhhhccccccCccchhhhcccccccccCCCCCCceEEEEEEEEeeecceEEEc
Confidence            22222    1    112334454443  233344433  2223222111   1223579999999999999999999999


Q ss_pred             ecCccce--eeeehhCCCcceeeeEEeeEeeeCCCCCCCCCCCCCceEEecCCceeEEEEeEEEeeee
Q 028969          135 VHGLNIY--VAQMIFGGAKNVNVSHVIHDLSFGPKYPGIHNPLDGTVRMLHDTSGTFKYYIKVWPWFC  200 (201)
Q Consensus       135 ~~~~~~~--~~~~~~~~~~~~N~sH~I~~lsFG~~~~~~~~PLDg~~~~~~~~~~~~~Y~lkvVPT~~  200 (201)
                      ||+....  .+........++||||+|||||||+.+|++.|||||+..++.+...+|+||+|||||.|
T Consensus       216 ~g~~~~~~~~h~hd~~~~~~~n~SH~InhLSFG~~~p~~~nPLdG~~~~~~~~~~~~~Yf~KvVPT~y  283 (379)
T KOG2667|consen  216 PGKSSQHSNAHVHDLSLLDNLNFSHRINHLSFGEYIPGIVNPLDGTNFIANEHLTTFQYFLKVVPTVY  283 (379)
T ss_pred             cCCCccccccccchhhhcccCCceEEEeeeccCCCCcccccCCCCccccccCCccceeeEEEEcceEE
Confidence            9864321  11111111157999999999999999999999999999999999999999999999987

>PF07970 COPIIcoated_ERV: Endoplasmic reticulum vesicle transporter ; InterPro: IPR012936 This domain occurs in many hypothetical proteins, and also two partially characterised proteins

Probab=100.00  E-value=1.6e-33  Score=232.66  Aligned_cols=124  Identities=33%  Similarity=0.606  Sum_probs=94.5

Q ss_pred             CCCCCChhhHHH--hhhccCCCC--chHHHHHHH----HhhccCCCccEEEEEEEEEeeeeEEEEeecCccce----eee
Q 028969           77 DHNKDHKDDIDE--KLHAFGFDE--DAENMIKKV----KHALESGEGCRVYGVLDVQRVAGNFHISVHGLNIY----VAQ  144 (201)
Q Consensus        77 ~~~~~~~~~~~~--~~~~~~~~~--~~~~~~~~~----~~~~~~~egCri~G~l~VnkV~G~fhi~~~~~~~~----~~~  144 (201)
                      ..||..|+++.+  +.++|.+..  .++||..++    +.....+|||||+|++.||||+|||||+||+....    .+.
T Consensus         9 ~~CCnTC~~V~~ay~~~~w~~~~~~~~eQC~~~~~~~~~~~~~~~egCri~G~l~VnkV~Gnfhi~~g~~~~~~~~h~hd   88 (222)
T PF07970_consen    9 GKCCNTCEDVREAYRKKGWAFPDLENIEQCRREYVKKIKEQVNEGEGCRIYGSLEVNKVPGNFHIAPGRSFQQDGGHIHD   88 (222)
T ss_pred             CCcCcCHHHHHHHHHHhCCCCCCccccccccchhhhhhhhhccCCCCCEEEEEEEEEEEEEEEEEEecchhccCCcceee
Confidence            457778888743  455666543  467766553    33445679999999999999999999999974321    121


Q ss_pred             ehhCCCc-ceeeeEEeeEeeeCCCCCCCCCCCCCceEE--ecCCceeEEEEeEEEeeee
Q 028969          145 MIFGGAK-NVNVSHVIHDLSFGPKYPGIHNPLDGTVRM--LHDTSGTFKYYIKVWPWFC  200 (201)
Q Consensus       145 ~~~~~~~-~~N~sH~I~~lsFG~~~~~~~~PLDg~~~~--~~~~~~~~~Y~lkvVPT~~  200 (201)
                      ....... .+||||+|||||||+++|+..|||||+.++  ++....+|+||||||||+|
T Consensus        89 ~~~~~~~~~~N~SH~I~~lsFG~~~~~~~~PLdg~~~~~~~~~~~~~~~YflkvVPT~y  147 (222)
T PF07970_consen   89 LSPFDDEPKFNFSHTINHLSFGEEIPGIVNPLDGTQKIVQTDNGNYMYQYFLKVVPTTY  147 (222)
T ss_pred             hhhhccccCCCCCeEEEEEEeccccccccccccCccccccCCCCceeEEEEEEEeeeee
Confidence            1111222 799999999999999999999999999983  5777899999999999998

One of these proteins, PTX1 Q96RQ1 from SWISSPROT, is a homeodomain-containing transcription factor involved in regulating all pituitary hormone genes []. This protein is down regulated in prostate carcinoma []. The other protein, ERGIC-32 Q969X5 from SWISSPROT, is involved in protein transport from the ER to the Golgi [].

>PF13850 ERGIC_N: Endoplasmic Reticulum-Golgi Intermediate Compartment (ERGIC)

Probab=99.56  E-value=3.9e-15  Score=107.81  Aligned_cols=44  Identities=48%  Similarity=0.881  Sum_probs=41.9

Q ss_pred             CeecCCCCCeeeEEEEEEeCccCCCeeeeeeeecCCCceeccCC
Q 028969            1 MSVDLKRGETLPIHINMTFPALPCDVLSVDAIDMSGKHEVDLDT   44 (201)
Q Consensus         1 ~~VD~~~~~kl~In~DItfp~~PC~~lslDv~D~~G~~~~dv~~   44 (201)
                      |.||.+++++|+||||||||+|||++|++|++|++|++++|++|
T Consensus        53 ~~VD~~~~~~l~in~ditf~~~pC~~l~vDv~D~~G~~~~dv~h   96 (96)
T PF13850_consen   53 LVVDTSRDEKLQINFDITFPHMPCDFLSVDVQDASGDHQLDVTH   96 (96)
T ss_pred             EEEcCCCCceEEEEEEEEECCCccCeeeeEeEccCCCeeccccC
Confidence            57999999999999999999999999999999999999999875

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00