Citrus Sinensis ID: 029003

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200
Protein Sequence
MAPENNAKPEPGLKMVPVTKPKGWVVLVLRLLALAATASATIVMGLNKETKTFVVATVGTTPIKATFSAKFQHTPAFVFFVIANGLVSFHNVVMIAVNLFGKKLDYKGLRLAMIAIFDLLNTVLVSAGVNGAVYMAELGKYGNSHARWNKICDRFKTFCDHGGGAIIASFIGLALMIVISIISIVKLAKSKSNTPLLGEP
Secondary Structure (PSIPRED)
ccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHccccEEEEEEEEccccccEEEEEEEEccccHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccc
Secondary Structure Prediction (SSPRO)
cccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHccccccEEEEEcccccccEEEEEEEcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccc
Coil and Loop (DISEMBL)
mapennakpepglkmvpvtkpkGWVVLVLRLLALAATASATIVMGLNKETKTFVVATVgttpikatfsakfqhtpAFVFFVIANGLVSFHNVVMIAVNLFGKKLDYKGLRLAMIAIFDLLNTVLVSAGVNGAVYMAELGKYGNSHARWNKICDRFktfcdhgggaIIASFIGLALMIVISIISIVKLAksksntpllgep
Flexible Loop (DISEMBL)
mapennakpepglkmvpvtkPKGWVVLVLRLLALAATASATIVMGLNKETKTFVVATVGTTPIKATFSAKFQHTPAFVFFVIANGLVSFHNVVMIAVNLFGKKLDYKGLRLAMIAIFDLLNTVLVSAGVNGAVYMAELGKYGNSHARWNKICDRFKTFCDHGGGAIIASFIGLALMIVISIISIVklaksksntpllgep
Low Complexity Region (SEG)
MAPENNAKPEPGLKMVPVTKPKGWvvlvlrllalaatasaTIVMGLNKETKTFVVATVGTTPIKATFSAKFQHTPAFVFFVIANGLVSFHNVVMIAVNLFGKKLDYKGLRLAMIAIFDLLNTVLVSAGVNGAVYMAELGKYGNSHARWNKICDRFKTFCDHGGGAIIASFIGLALMIVISIISIVKLAKSKSNTPLLGEP
Disordered region (IsUnstruct)
***************VPVTKPKGWVVLVLRLLALAATASATIVMGLNKETKTFVVATVGTTPIKATFSAKFQHTPAFVFFVIANGLVSFHNVVMIAVNLFGKKLDYKGLRLAMIAIFDLLNTVLVSAGVNGAVYMAELGKYGNSHARWNKICDRFKTFCDHGGGAIIASFIGLALMIVISIISIVKLA************
Disordered Region (DISOPRED)
************************VVLVLRLLALAATASATIVMGLNKETKTFVVATVGTTPIKATFSAKFQHTPAFVFFVIANGLVSFHNVVMIAVNLFGKKLDYKGLRLAMIAIFDLLNTVLVSAGVNGAVYMAELGKYGNSHARWNKICDRFKTFCDHGGGAIIASFIGLALMIVISIISIVKLAK***********
Disordered Region (DISEMBL)
*********EPGLKMVPVTKPKGWVVLVLRLLALAATASATIVMGLNKETKTFVVATVGTTPIKATFSAKFQHTPAFVFFVIANGLVSFHNVVMIAVNLFGKKLDYKGLRLAMIAIFDLLNTVLVSAGVNGAVYMAELGKYGNSHARWNKICDRFKTFCDHGGGAIIASFIGLALMIVISIISIVKLAKSK*********
Disordered Region (DISPRO)
******************TKPKGWVVLVLRLLALAATASATIVMGLNKETKTFVVATVGTTPIKATFSAKFQHTPAFVFFVIANGLVSFHNVVMIAVNLFGKKLDYKGLRLAMIAIFDLLNTVLVSAGVNGAVYMAELGKYGNSHARWNKICDRFKTFCDHGGGAIIASFIGLALMIVISIISIVKLAKS**********
Transmembrane Helix (TMHMM)
iiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiii
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
iiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MAPENNAKPEPGLKMVPVTKPKGWVVLVLRLLALAATASATIVMGLNKETKTFVVATVGTTPIKATFSAKFQHTPAFVFFVIANGLVSFHNVVMIAVNLFGKKLDYKGLRLAMIAIFDLLNTVLVSAGVNGAVYMAELGKYGNSHARWNKICDRFKTFCDHGGGAIIASFIGLALMIVISIISIVKLAKSKSNTPLLGEP
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	200	2.2.26 [Sep-21-2011]
B9GIE4	199	CASP-like protein POPTRDR	yes	no	0.93	0.934	0.689	1e-66
B9I0U9	195	CASP-like protein POPTRDR	yes	no	0.965	0.989	0.635	3e-63
B9SV63	203	CASP-like protein RCOM_07	N/A	no	0.89	0.876	0.664	1e-62
C6TG62	194	CASP-like protein 9 OS=Gl	no	no	0.945	0.974	0.542	5e-57
D7MM00	195	CASP-like protein ARALYDR	N/A	no	0.88	0.902	0.607	3e-56
Q9FI10	197	CASP-like protein At5g445	yes	no	0.88	0.893	0.596	3e-55
A7QC16	204	CASP-like protein VIT_10s	yes	no	1.0	0.980	0.593	4e-53
D7MFJ8	197	CASP-like protein ARALYDR	N/A	no	0.835	0.847	0.630	4e-53
Q9SUP0	197	CASP-like protein At4g203	no	no	0.865	0.878	0.637	7e-50
Q0ILZ7	195	CASP-like protein Os12g06	yes	no	0.845	0.866	0.414	2e-32

>sp|B9GIE4|CSPL5_POPTR CASP-like protein POPTRDRAFT_798217 OS=Populus trichocarpa GN=POPTRDRAFT_798217 PE=3 SV=2

 Score =  252 bits (643), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 129/187 (68%), Positives = 156/187 (83%), Gaps = 1/187 (0%)

Query: 1   MAPENNAKPEPGLKMVPVTKPKGWVVLVLRLLALAATASATIVMGLNKETKTFVVATVGT 60
           MA ++  K E G   +   K + WV+L+LR+LA  ATA+AT+VMGLNKETKT VVATVG+
Sbjct: 1   MALQSEEKLEVGYSSLQ-PKTRKWVLLMLRVLAFFATAAATVVMGLNKETKTLVVATVGS 59

Query: 61  TPIKATFSAKFQHTPAFVFFVIANGLVSFHNVVMIAVNLFGKKLDYKGLRLAMIAIFDLL 120
           TPIKA+ +AKFQHTPAFVFFVIANGL S HN+VMI  +LFG+KLDYKGLRLAMIAI D++
Sbjct: 60  TPIKASLTAKFQHTPAFVFFVIANGLASIHNLVMIMGDLFGQKLDYKGLRLAMIAILDIM 119

Query: 121 NTVLVSAGVNGAVYMAELGKYGNSHARWNKICDRFKTFCDHGGGAIIASFIGLALMIVIS 180
              LVS GV+ A +MAELGK GNSHARWNKICD+F+TFCDHGGGA+IASF GL LM++IS
Sbjct: 120 TVALVSGGVSAAAFMAELGKNGNSHARWNKICDKFETFCDHGGGALIASFAGLILMLIIS 179

Query: 181 IISIVKL 187
           ++SI+KL
Sbjct: 180 VMSIIKL 186

Populus trichocarpa (taxid: 3694)

>sp|B9I0U9|CSPLB_POPTR CASP-like protein POPTRDRAFT_823125 OS=Populus trichocarpa GN=POPTRDRAFT_823125 PE=3 SV=1

 Score =  241 bits (614), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 124/195 (63%), Positives = 155/195 (79%), Gaps = 2/195 (1%)

Query: 1   MAPENNAKPEPGLKMVPVTKPKGWVVLVLRLLALAATASATIVMGLNKETKTFVVATVGT 60
           M  +N  K E G   +   KPK WV+L++R++A  ATA+AT+VM LNKETKT VVATVG 
Sbjct: 1   MGLQNEEKLELGCTGLQ-PKPKKWVLLMVRVVAFLATAAATLVMALNKETKTLVVATVGN 59

Query: 61  TPIKATFSAKFQHTPAFVFFVIANGLVSFHNVVMIAVNLFGKKLDYKGLRLAMIAIFDLL 120
           TPIK T +AKFQHTPAFVFFVIANG+ SFHN++MI V L G+KLDYKG+RLAM+AI D++
Sbjct: 60  TPIKVTLTAKFQHTPAFVFFVIANGMASFHNLLMIMVELCGQKLDYKGMRLAMVAILDMM 119

Query: 121 NTVLVSAGVNGAVYMAELGKYGNSHARWNKICDRFKTFCDHGGGAIIASFIGLALMIVIS 180
              LVS G + A +MAELGK GNSHARW+KICD+F+TFCDHGG A+IAS  GL LM++IS
Sbjct: 120 TVALVSGGASAATFMAELGKNGNSHARWDKICDKFETFCDHGGAALIASSAGLILMMIIS 179

Query: 181 IISIVK-LAKSKSNT 194
           ++SI+K L K KS++
Sbjct: 180 VMSIMKLLIKPKSDS 194

Populus trichocarpa (taxid: 3694)

>sp|B9SV63|CSPLC_RICCO CASP-like protein RCOM_0770240 OS=Ricinus communis GN=RCOM_0770240 PE=2 SV=1

 Score =  239 bits (609), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 119/179 (66%), Positives = 140/179 (78%), Gaps = 1/179 (0%)

Query: 1   MAPENNAKPEPGLKMVPV-TKPKGWVVLVLRLLALAATASATIVMGLNKETKTFVVATVG 59
           MA  N  KPE G     +  + K WV+L+LR +A  ATA+ATIVM  N+ETKTFVVAT+G
Sbjct: 1   MALVNAEKPEVGSSPSSLGPRNKSWVLLMLRFVAFLATAAATIVMAANRETKTFVVATIG 60

Query: 60  TTPIKATFSAKFQHTPAFVFFVIANGLVSFHNVVMIAVNLFGKKLDYKGLRLAMIAIFDL 119
           +TPIKAT +AKFQHTPAFVFFVIANG+ S HN+VMIA + F +K DYKGLR   +AI D+
Sbjct: 61  STPIKATVTAKFQHTPAFVFFVIANGMGSIHNLVMIAGDTFVRKFDYKGLRWVTVAILDM 120

Query: 120 LNTVLVSAGVNGAVYMAELGKYGNSHARWNKICDRFKTFCDHGGGAIIASFIGLALMIV 178
           L   L+S GVN AV+MAELGK GNSHA+WNKICDRF +FCDHGG AIIASFIGL LM+V
Sbjct: 121 LTAALISGGVNAAVFMAELGKNGNSHAKWNKICDRFGSFCDHGGAAIIASFIGLLLMLV 179

Ricinus communis (taxid: 3988)

>sp|C6TG62|CSPL9_SOYBN CASP-like protein 9 OS=Glycine max PE=2 SV=1

 Score =  220 bits (560), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 103/190 (54%), Positives = 139/190 (73%), Gaps = 1/190 (0%)

Query: 1   MAPENNAKPEPGLKMVPVTKPK-GWVVLVLRLLALAATASATIVMGLNKETKTFVVATVG 59
           MA EN  K E     VP  KPK  WV+L LR++A  ATASAT+VM  NK+TK  VVAT+G
Sbjct: 1   MASENGDKLELAFSAVPDPKPKKDWVILSLRVVAFFATASATLVMAFNKQTKGMVVATIG 60

Query: 60  TTPIKATFSAKFQHTPAFVFFVIANGLVSFHNVVMIAVNLFGKKLDYKGLRLAMIAIFDL 119
           T P+  T +A FQHTPAF+FFVI N + SF+N+++I V + G + DYKGLRL +IAI D+
Sbjct: 61  TNPVTITLTAMFQHTPAFIFFVIVNAIASFYNLLVIGVEILGPQYDYKGLRLGLIAILDV 120

Query: 120 LNTVLVSAGVNGAVYMAELGKYGNSHARWNKICDRFKTFCDHGGGAIIASFIGLALMIVI 179
           +   L + G   A +MAELG+ GNSHARW+KICD+F+ +C+ GG A++ASF+GL L++V+
Sbjct: 121 MTMALAATGDGAATFMAELGRNGNSHARWDKICDKFEAYCNRGGVALVASFVGLILLLVV 180

Query: 180 SIISIVKLAK 189
           +++SI KL K
Sbjct: 181 TVMSITKLLK 190

Glycine max (taxid: 3847)

>sp|D7MM00|CSPLG_ARALL CASP-like protein ARALYDRAFT_683682 OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_683682 PE=3 SV=1

 Score =  217 bits (553), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 107/176 (60%), Positives = 135/176 (76%)

Query: 25  VVLVLRLLALAATASATIVMGLNKETKTFVVATVGTTPIKATFSAKFQHTPAFVFFVIAN 84
           ++L LRLLA +AT SA IVMGLNKET+TFVV  VG TPIKATF+AKF HTPAFVFFV+AN
Sbjct: 16  ILLGLRLLAFSATLSAAIVMGLNKETETFVVGKVGNTPIKATFTAKFDHTPAFVFFVVAN 75

Query: 85  GLVSFHNVVMIAVNLFGKKLDYKGLRLAMIAIFDLLNTVLVSAGVNGAVYMAELGKYGNS 144
            +VSFHN++MIA+ +FG K+++ G RL  +AI D+LN  L+SA  N A +MAE+GK GN 
Sbjct: 76  AMVSFHNLLMIALQIFGGKMEFTGFRLLSVAILDMLNVTLISAAANAAAFMAEVGKNGNK 135

Query: 145 HARWNKICDRFKTFCDHGGGAIIASFIGLALMIVISIISIVKLAKSKSNTPLLGEP 200
           HARW+KICDRF T+CDHG GA+IA+F G+ LM++IS  SI +LA+          P
Sbjct: 136 HARWDKICDRFATYCDHGAGALIAAFAGVILMLIISAASISRLAQQNKCCSTTASP 191

Arabidopsis lyrata subsp. lyrata (taxid: 81972)

>sp|Q9FI10|CSPLW_ARATH CASP-like protein At5g44550 OS=Arabidopsis thaliana GN=At5g44550 PE=1 SV=1

 Score =  214 bits (545), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 105/176 (59%), Positives = 134/176 (76%)

Query: 25  VVLVLRLLALAATASATIVMGLNKETKTFVVATVGTTPIKATFSAKFQHTPAFVFFVIAN 84
           ++L LRLLA +AT SA IVMGLNKETKTF+V  VG TPI+ATF+AKF HTPAFVFFV+AN
Sbjct: 18  ILLGLRLLAFSATLSAAIVMGLNKETKTFIVGKVGNTPIQATFTAKFDHTPAFVFFVVAN 77

Query: 85  GLVSFHNVVMIAVNLFGKKLDYKGLRLAMIAIFDLLNTVLVSAGVNGAVYMAELGKYGNS 144
            +VSFHN++MIA+ +FG K+++ G RL  +AI D+LN  L+SA  N A +MAE+GK GN 
Sbjct: 78  AMVSFHNLLMIALQIFGGKMEFTGFRLLSVAILDMLNVTLISAAANAAAFMAEVGKNGNK 137

Query: 145 HARWNKICDRFKTFCDHGGGAIIASFIGLALMIVISIISIVKLAKSKSNTPLLGEP 200
           HARW+KICDRF T+CDHG GA+IA+F G+ LM++IS  SI +L +          P
Sbjct: 138 HARWDKICDRFATYCDHGAGALIAAFAGVILMLIISAASISRLVQPNKCCSTTASP 193

Arabidopsis thaliana (taxid: 3702)

>sp|A7QC16|CSPL1_VITVI CASP-like protein VIT_10s0092g00220 OS=Vitis vinifera GN=VIT_10s0092g00220 PE=2 SV=2

 Score =  207 bits (527), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 121/204 (59%), Positives = 154/204 (75%), Gaps = 4/204 (1%)

Query: 1   MAPENNAKPE-PGLK--MVPVTKPK-GWVVLVLRLLALAATASATIVMGLNKETKTFVVA 56
           MA +   KPE  G K  +V VTK K   +VLVLR++A  ATASATIVMGLN+ETKT +V 
Sbjct: 1   MASKGEEKPELVGSKQGIVSVTKAKHDQIVLVLRVVAFLATASATIVMGLNQETKTLLVG 60

Query: 57  TVGTTPIKATFSAKFQHTPAFVFFVIANGLVSFHNVVMIAVNLFGKKLDYKGLRLAMIAI 116
           T+GTTPI+AT  AKFQHTPAFVFFV+ANGL S +N+VM+ V++FG+KLD KGLRL +I+I
Sbjct: 61  TIGTTPIRATLKAKFQHTPAFVFFVVANGLASVYNLVMLGVDVFGRKLDCKGLRLVIISI 120

Query: 117 FDLLNTVLVSAGVNGAVYMAELGKYGNSHARWNKICDRFKTFCDHGGGAIIASFIGLALM 176
            D++   +V+AG + A +MAELGK GNSHA+WNKICD+F++FC  GGGA+I SFI L L+
Sbjct: 121 LDMVIVAVVAAGASSAAFMAELGKNGNSHAKWNKICDKFESFCHQGGGALIPSFIALLLL 180

Query: 177 IVISIISIVKLAKSKSNTPLLGEP 200
            +IS ISI+ L   K  +P    P
Sbjct: 181 FLISAISIITLHNQKLTSPHATTP 204

Vitis vinifera (taxid: 29760)

>sp|D7MFJ8|CSPLC_ARALL CASP-like protein ARALYDRAFT_492822 OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_492822 PE=3 SV=1

 Score =  207 bits (526), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 106/168 (63%), Positives = 134/168 (79%), Gaps = 1/168 (0%)

Query: 21  PKGWVVLV-LRLLALAATASATIVMGLNKETKTFVVATVGTTPIKATFSAKFQHTPAFVF 79
            K W +L+ LR+ A  AT +A IVM LNKETKT VVAT+GT PIKAT +AKFQ TPAFVF
Sbjct: 13  TKSWKLLLGLRVFAFMATLAAAIVMSLNKETKTLVVATIGTLPIKATLTAKFQDTPAFVF 72

Query: 80  FVIANGLVSFHNVVMIAVNLFGKKLDYKGLRLAMIAIFDLLNTVLVSAGVNGAVYMAELG 139
           FVIAN +VSFHN++MI + +F +KL+YKG+RL  IAI D+LN  LVSA  N AV++AELG
Sbjct: 73  FVIANVMVSFHNLLMIVLQIFSRKLEYKGVRLLSIAILDMLNATLVSAAANAAVFVAELG 132

Query: 140 KYGNSHARWNKICDRFKTFCDHGGGAIIASFIGLALMIVISIISIVKL 187
           K GN HA+WNK+CDRF T+CDHG GA+IA+F G+ LM+++S +SI +L
Sbjct: 133 KNGNKHAKWNKVCDRFATYCDHGAGALIAAFAGVILMLLVSSVSISRL 180

Arabidopsis lyrata subsp. lyrata (taxid: 81972)

>sp|Q9SUP0|CSPLQ_ARATH CASP-like protein At4g20390 OS=Arabidopsis thaliana GN=At4g20390 PE=2 SV=1

 Score =  196 bits (498), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 111/174 (63%), Positives = 137/174 (78%), Gaps = 1/174 (0%)

Query: 21  PKGWVVLV-LRLLALAATASATIVMGLNKETKTFVVATVGTTPIKATFSAKFQHTPAFVF 79
            K W +L+ LR+ A  AT +A IVM LNKETKT VVAT+GT PIKAT +AKFQHTPAFVF
Sbjct: 13  TKSWKLLLGLRIFAFMATLAAAIVMSLNKETKTLVVATIGTVPIKATLTAKFQHTPAFVF 72

Query: 80  FVIANGLVSFHNVVMIAVNLFGKKLDYKGLRLAMIAIFDLLNTVLVSAGVNGAVYMAELG 139
           FVIAN +VSFHN++MI V +F +KL+YKGLRL  IAI D+LN  LVSA  N AV++AELG
Sbjct: 73  FVIANVMVSFHNLLMIVVQIFSRKLEYKGLRLLSIAILDMLNATLVSAAANAAVFVAELG 132

Query: 140 KYGNSHARWNKICDRFKTFCDHGGGAIIASFIGLALMIVISIISIVKLAKSKSN 193
           K GN HA+WNK+CDRF T+CDHG GAIIA+F G+ LM+++S +SI +L  +  N
Sbjct: 133 KNGNKHAKWNKVCDRFTTYCDHGAGAIIAAFAGVILMLLVSAVSISRLLINSKN 186

Arabidopsis thaliana (taxid: 3702)

>sp|Q0ILZ7|CSPL6_ORYSJ CASP-like protein Os12g0610800 OS=Oryza sativa subsp. japonica GN=Os12g0610800 PE=2 SV=1

 Score =  138 bits (348), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 73/176 (41%), Positives = 109/176 (61%), Gaps = 7/176 (3%)

Query: 1   MAPENNAKPEPGLKMVPVTKPKGWVVL---VLRLLALAATASATIVMGLNKETKTFVVAT 57
           M  E   KP        + + K  ++    V+R     ATA A ++MGLNK++ T VVA 
Sbjct: 1   MDLEKGKKPSEQAAACRIMQVKDKLITLQPVVRACVFLATAVAAVIMGLNKQSYTTVVAI 60

Query: 58  VGTTPIKATFSAKFQHTPAFVFFVIANGLVSFHNVVMIAVNLFGKKLDYKGLRLAMIAIF 117
           VGT P+  TF+AKF+ TPAFVFFVIAN + S +N+++    L  +++  +  +   + + 
Sbjct: 61  VGTRPVTQTFTAKFKDTPAFVFFVIANAIASGYNLMV----LVTRRILQRRAQSLSVHLL 116

Query: 118 DLLNTVLVSAGVNGAVYMAELGKYGNSHARWNKICDRFKTFCDHGGGAIIASFIGL 173
           D++   L++ G   A  MA+LGK GN HARWN ICD+F +FC+HGG A+++SFIG+
Sbjct: 117 DMVILTLLATGSATAASMAQLGKNGNLHARWNPICDKFGSFCNHGGIALVSSFIGV 172

Oryza sativa subsp. japonica (taxid: 39947)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	200
341958678	199	RecName: Full=CASP-like protein POPTRDRA	0.93	0.934	0.689	7e-65
224115564	195	predicted protein [Populus trichocarpa]	0.965	0.989	0.635	1e-61
224061461	173	predicted protein [Populus trichocarpa]	0.8	0.924	0.75	5e-61
255578023	203	conserved hypothetical protein [Ricinus	0.89	0.876	0.664	6e-61
356556491	201	PREDICTED: CASP-like protein 9-like [Gly	0.95	0.945	0.601	2e-60
359806294	194	CASP-like protein 9 [Glycine max] gi|288	0.945	0.974	0.542	3e-55
356525395	194	PREDICTED: CASP-like protein 9-like [Gly	0.945	0.974	0.542	1e-54
297791363	195	predicted protein [Arabidopsis lyrata su	0.88	0.902	0.607	2e-54
357519445	194	hypothetical protein MTR_8g089300 [Medic	0.965	0.994	0.567	5e-54
356532900	207	PREDICTED: LOW QUALITY PROTEIN: CASP-lik	0.91	0.879	0.575	7e-54

>gi|341958678|sp|B9GIE4.2|CSPL5_POPTR RecName: Full=CASP-like protein POPTRDRAFT_798217

 Score =  252 bits (643), Expect = 7e-65,   Method: Compositional matrix adjust.
 Identities = 129/187 (68%), Positives = 156/187 (83%), Gaps = 1/187 (0%)

Query: 1   MAPENNAKPEPGLKMVPVTKPKGWVVLVLRLLALAATASATIVMGLNKETKTFVVATVGT 60
           MA ++  K E G   +   K + WV+L+LR+LA  ATA+AT+VMGLNKETKT VVATVG+
Sbjct: 1   MALQSEEKLEVGYSSLQ-PKTRKWVLLMLRVLAFFATAAATVVMGLNKETKTLVVATVGS 59

Query: 61  TPIKATFSAKFQHTPAFVFFVIANGLVSFHNVVMIAVNLFGKKLDYKGLRLAMIAIFDLL 120
           TPIKA+ +AKFQHTPAFVFFVIANGL S HN+VMI  +LFG+KLDYKGLRLAMIAI D++
Sbjct: 60  TPIKASLTAKFQHTPAFVFFVIANGLASIHNLVMIMGDLFGQKLDYKGLRLAMIAILDIM 119

Query: 121 NTVLVSAGVNGAVYMAELGKYGNSHARWNKICDRFKTFCDHGGGAIIASFIGLALMIVIS 180
              LVS GV+ A +MAELGK GNSHARWNKICD+F+TFCDHGGGA+IASF GL LM++IS
Sbjct: 120 TVALVSGGVSAAAFMAELGKNGNSHARWNKICDKFETFCDHGGGALIASFAGLILMLIIS 179

Query: 181 IISIVKL 187
           ++SI+KL
Sbjct: 180 VMSIIKL 186

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224115564|ref|XP_002317067.1| predicted protein [Populus trichocarpa] gi|341958555|sp|B9I0U9.1|CSPLB_POPTR RecName: Full=CASP-like protein POPTRDRAFT_823125 gi|222860132|gb|EEE97679.1| predicted protein [Populus trichocarpa]

 Score =  241 bits (614), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 124/195 (63%), Positives = 155/195 (79%), Gaps = 2/195 (1%)

Query: 1   MAPENNAKPEPGLKMVPVTKPKGWVVLVLRLLALAATASATIVMGLNKETKTFVVATVGT 60
           M  +N  K E G   +   KPK WV+L++R++A  ATA+AT+VM LNKETKT VVATVG 
Sbjct: 1   MGLQNEEKLELGCTGLQ-PKPKKWVLLMVRVVAFLATAAATLVMALNKETKTLVVATVGN 59

Query: 61  TPIKATFSAKFQHTPAFVFFVIANGLVSFHNVVMIAVNLFGKKLDYKGLRLAMIAIFDLL 120
           TPIK T +AKFQHTPAFVFFVIANG+ SFHN++MI V L G+KLDYKG+RLAM+AI D++
Sbjct: 60  TPIKVTLTAKFQHTPAFVFFVIANGMASFHNLLMIMVELCGQKLDYKGMRLAMVAILDMM 119

Query: 121 NTVLVSAGVNGAVYMAELGKYGNSHARWNKICDRFKTFCDHGGGAIIASFIGLALMIVIS 180
              LVS G + A +MAELGK GNSHARW+KICD+F+TFCDHGG A+IAS  GL LM++IS
Sbjct: 120 TVALVSGGASAATFMAELGKNGNSHARWDKICDKFETFCDHGGAALIASSAGLILMMIIS 179

Query: 181 IISIVK-LAKSKSNT 194
           ++SI+K L K KS++
Sbjct: 180 VMSIMKLLIKPKSDS 194

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224061461|ref|XP_002300491.1| predicted protein [Populus trichocarpa] gi|222847749|gb|EEE85296.1| predicted protein [Populus trichocarpa]

 Score =  239 bits (610), Expect = 5e-61,   Method: Compositional matrix adjust.
 Identities = 120/160 (75%), Positives = 142/160 (88%)

Query: 28  VLRLLALAATASATIVMGLNKETKTFVVATVGTTPIKATFSAKFQHTPAFVFFVIANGLV 87
           +LR+LA  ATA+AT+VMGLNKETKT VVATVG+TPIKA+ +AKFQHTPAFVFFVIANGL 
Sbjct: 1   MLRVLAFFATAAATVVMGLNKETKTLVVATVGSTPIKASLTAKFQHTPAFVFFVIANGLA 60

Query: 88  SFHNVVMIAVNLFGKKLDYKGLRLAMIAIFDLLNTVLVSAGVNGAVYMAELGKYGNSHAR 147
           S HN+VMI  +LFG+KLDYKGLRLAMIAI D++   LVS GV+ A +MAELGK GNSHAR
Sbjct: 61  SIHNLVMIMGDLFGQKLDYKGLRLAMIAILDIMTVALVSGGVSAAAFMAELGKNGNSHAR 120

Query: 148 WNKICDRFKTFCDHGGGAIIASFIGLALMIVISIISIVKL 187
           WNKICD+F+TFCDHGGGA+IASF GL LM++IS++SI+KL
Sbjct: 121 WNKICDKFETFCDHGGGALIASFAGLILMLIISVMSIIKL 160

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255578023|ref|XP_002529882.1| conserved hypothetical protein [Ricinus communis] gi|288558966|sp|B9SV63.1|CSPLC_RICCO RecName: Full=CASP-like protein RCOM_0770240 gi|223530609|gb|EEF32485.1| conserved hypothetical protein [Ricinus communis]

 Score =  239 bits (609), Expect = 6e-61,   Method: Compositional matrix adjust.
 Identities = 119/179 (66%), Positives = 140/179 (78%), Gaps = 1/179 (0%)

Query: 1   MAPENNAKPEPGLKMVPV-TKPKGWVVLVLRLLALAATASATIVMGLNKETKTFVVATVG 59
           MA  N  KPE G     +  + K WV+L+LR +A  ATA+ATIVM  N+ETKTFVVAT+G
Sbjct: 1   MALVNAEKPEVGSSPSSLGPRNKSWVLLMLRFVAFLATAAATIVMAANRETKTFVVATIG 60

Query: 60  TTPIKATFSAKFQHTPAFVFFVIANGLVSFHNVVMIAVNLFGKKLDYKGLRLAMIAIFDL 119
           +TPIKAT +AKFQHTPAFVFFVIANG+ S HN+VMIA + F +K DYKGLR   +AI D+
Sbjct: 61  STPIKATVTAKFQHTPAFVFFVIANGMGSIHNLVMIAGDTFVRKFDYKGLRWVTVAILDM 120

Query: 120 LNTVLVSAGVNGAVYMAELGKYGNSHARWNKICDRFKTFCDHGGGAIIASFIGLALMIV 178
           L   L+S GVN AV+MAELGK GNSHA+WNKICDRF +FCDHGG AIIASFIGL LM+V
Sbjct: 121 LTAALISGGVNAAVFMAELGKNGNSHAKWNKICDRFGSFCDHGGAAIIASFIGLLLMLV 179

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356556491|ref|XP_003546558.1| PREDICTED: CASP-like protein 9-like [Glycine max]

 Score =  237 bits (604), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 116/193 (60%), Positives = 146/193 (75%), Gaps = 3/193 (1%)

Query: 1   MAPENNAKPEPGLKMVP--VTKPK-GWVVLVLRLLALAATASATIVMGLNKETKTFVVAT 57
           MA EN  K E GL  VP    KPK  WV+L LR++A  ATASAT+VM  NK+TK+FVVAT
Sbjct: 1   MASENGEKVEIGLNAVPQETHKPKKDWVLLSLRMVAFFATASATLVMTFNKQTKSFVVAT 60

Query: 58  VGTTPIKATFSAKFQHTPAFVFFVIANGLVSFHNVVMIAVNLFGKKLDYKGLRLAMIAIF 117
           VG+TPI AT +AKF  TPAFVFFVIANG  S HN+VMI + + G + DYKGLRLA+IAI 
Sbjct: 61  VGSTPITATLAAKFNQTPAFVFFVIANGNASLHNLVMIVMEVLGPRYDYKGLRLALIAIL 120

Query: 118 DLLNTVLVSAGVNGAVYMAELGKYGNSHARWNKICDRFKTFCDHGGGAIIASFIGLALMI 177
           D++   L SAG   A +M+ELGK GNSHARW+KICD+F+T+C+ GG A+I SF+G  L+ 
Sbjct: 121 DMMTMALASAGDGAATFMSELGKNGNSHARWDKICDKFETYCNRGGAALIVSFVGFILLF 180

Query: 178 VISIISIVKLAKS 190
           +IS++S++KL KS
Sbjct: 181 IISVMSVIKLLKS 193

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359806294|ref|NP_001241476.1| CASP-like protein 9 [Glycine max] gi|288559105|sp|C6TG62.1|CSPL9_SOYBN RecName: Full=CASP-like protein 9 gi|255641070|gb|ACU20814.1| unknown [Glycine max]

 Score =  220 bits (560), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 103/190 (54%), Positives = 139/190 (73%), Gaps = 1/190 (0%)

Query: 1   MAPENNAKPEPGLKMVPVTKPK-GWVVLVLRLLALAATASATIVMGLNKETKTFVVATVG 59
           MA EN  K E     VP  KPK  WV+L LR++A  ATASAT+VM  NK+TK  VVAT+G
Sbjct: 1   MASENGDKLELAFSAVPDPKPKKDWVILSLRVVAFFATASATLVMAFNKQTKGMVVATIG 60

Query: 60  TTPIKATFSAKFQHTPAFVFFVIANGLVSFHNVVMIAVNLFGKKLDYKGLRLAMIAIFDL 119
           T P+  T +A FQHTPAF+FFVI N + SF+N+++I V + G + DYKGLRL +IAI D+
Sbjct: 61  TNPVTITLTAMFQHTPAFIFFVIVNAIASFYNLLVIGVEILGPQYDYKGLRLGLIAILDV 120

Query: 120 LNTVLVSAGVNGAVYMAELGKYGNSHARWNKICDRFKTFCDHGGGAIIASFIGLALMIVI 179
           +   L + G   A +MAELG+ GNSHARW+KICD+F+ +C+ GG A++ASF+GL L++V+
Sbjct: 121 MTMALAATGDGAATFMAELGRNGNSHARWDKICDKFEAYCNRGGVALVASFVGLILLLVV 180

Query: 180 SIISIVKLAK 189
           +++SI KL K
Sbjct: 181 TVMSITKLLK 190

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356525395|ref|XP_003531310.1| PREDICTED: CASP-like protein 9-like [Glycine max]

 Score =  218 bits (554), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 103/190 (54%), Positives = 138/190 (72%), Gaps = 1/190 (0%)

Query: 1   MAPENNAKPEPGLKMVPVTKPK-GWVVLVLRLLALAATASATIVMGLNKETKTFVVATVG 59
           MA EN  K E    +VP  KPK  WV L LR++A  ATASAT+VM  NK+TK+ VVAT+G
Sbjct: 1   MASENGDKLELAFSVVPDPKPKKDWVNLSLRVVAFLATASATLVMAFNKQTKSMVVATIG 60

Query: 60  TTPIKATFSAKFQHTPAFVFFVIANGLVSFHNVVMIAVNLFGKKLDYKGLRLAMIAIFDL 119
           T P+  T +A FQHTPAF FFVI N + SF+N+V+I V + G + DYK LRL +IAI D+
Sbjct: 61  TNPVTITLTAMFQHTPAFTFFVIVNAIASFYNMVVIGVEILGPQYDYKELRLGLIAILDV 120

Query: 120 LNTVLVSAGVNGAVYMAELGKYGNSHARWNKICDRFKTFCDHGGGAIIASFIGLALMIVI 179
           +   L + G   A +MAELG+ GNSHARW+KICD+F+ +C+ GG A+IASF+GL L++V+
Sbjct: 121 MTMALAATGDGAATFMAELGRNGNSHARWDKICDKFEAYCNRGGVALIASFVGLILLLVV 180

Query: 180 SIISIVKLAK 189
           +++SI K+ K
Sbjct: 181 TVMSITKMLK 190

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297791363|ref|XP_002863566.1| predicted protein [Arabidopsis lyrata subsp. lyrata] gi|341958565|sp|D7MM00.1|CSPLG_ARALL RecName: Full=CASP-like protein ARALYDRAFT_683682 gi|297309401|gb|EFH39825.1| predicted protein [Arabidopsis lyrata subsp. lyrata]

 Score =  217 bits (553), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 107/176 (60%), Positives = 135/176 (76%)

Query: 25  VVLVLRLLALAATASATIVMGLNKETKTFVVATVGTTPIKATFSAKFQHTPAFVFFVIAN 84
           ++L LRLLA +AT SA IVMGLNKET+TFVV  VG TPIKATF+AKF HTPAFVFFV+AN
Sbjct: 16  ILLGLRLLAFSATLSAAIVMGLNKETETFVVGKVGNTPIKATFTAKFDHTPAFVFFVVAN 75

Query: 85  GLVSFHNVVMIAVNLFGKKLDYKGLRLAMIAIFDLLNTVLVSAGVNGAVYMAELGKYGNS 144
            +VSFHN++MIA+ +FG K+++ G RL  +AI D+LN  L+SA  N A +MAE+GK GN 
Sbjct: 76  AMVSFHNLLMIALQIFGGKMEFTGFRLLSVAILDMLNVTLISAAANAAAFMAEVGKNGNK 135

Query: 145 HARWNKICDRFKTFCDHGGGAIIASFIGLALMIVISIISIVKLAKSKSNTPLLGEP 200
           HARW+KICDRF T+CDHG GA+IA+F G+ LM++IS  SI +LA+          P
Sbjct: 136 HARWDKICDRFATYCDHGAGALIAAFAGVILMLIISAASISRLAQQNKCCSTTASP 191

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357519445|ref|XP_003630011.1| hypothetical protein MTR_8g089300 [Medicago truncatula] gi|355524033|gb|AET04487.1| hypothetical protein MTR_8g089300 [Medicago truncatula]

 Score =  216 bits (549), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 110/194 (56%), Positives = 146/194 (75%), Gaps = 1/194 (0%)

Query: 1   MAPENNAKPEPGLKMVPVTKPK-GWVVLVLRLLALAATASATIVMGLNKETKTFVVATVG 59
           MA  N  K E G   VP TKPK  W++L LR++A  A  SAT+VM LNK+TKTFVVAT+G
Sbjct: 1   MASGNEEKIESGFNDVPETKPKKDWILLSLRVVAFLAAVSATLVMSLNKQTKTFVVATIG 60

Query: 60  TTPIKATFSAKFQHTPAFVFFVIANGLVSFHNVVMIAVNLFGKKLDYKGLRLAMIAIFDL 119
           +TPI    +AKFQHTPAFV+FV+ NG+VS HN+VMIA+ + G K   KGL+LA+IA+FD 
Sbjct: 61  STPITVPLTAKFQHTPAFVYFVVPNGIVSLHNLVMIAMYILGPKFHNKGLQLALIAVFDT 120

Query: 120 LNTVLVSAGVNGAVYMAELGKYGNSHARWNKICDRFKTFCDHGGGAIIASFIGLALMIVI 179
           +   L S+G   A  M+ELG+ GNSHA+WNKICD+F+++C+ GGG++IASFIGL L+++I
Sbjct: 121 MALALASSGDGAATAMSELGRNGNSHAKWNKICDKFESYCNRGGGSLIASFIGLILLLII 180

Query: 180 SIISIVKLAKSKSN 193
           +++SI KL K   N
Sbjct: 181 TVMSINKLLKLNRN 194

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356532900|ref|XP_003535007.1| PREDICTED: LOW QUALITY PROTEIN: CASP-like protein 9-like [Glycine max]

 Score =  215 bits (548), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 107/186 (57%), Positives = 138/186 (74%), Gaps = 4/186 (2%)

Query: 5   NNAKPEPGLKMVPVTKPKGWVVLVLRLLALAATASATIVMGLNKETKTFVVATVGTTPIK 64
           NNA   P     P    K WV+L LR++A  ATASAT+VM  NK+TK+FVVATVG+TPI 
Sbjct: 16  NNASVVPHETNXP---KKDWVLLSLRVVAFLATASATLVMAFNKQTKSFVVATVGSTPIT 72

Query: 65  ATFSAKFQHTPAFVFFVIANGLVSFHN-VVMIAVNLFGKKLDYKGLRLAMIAIFDLLNTV 123
           ATF+AKF  TPAFVFFVIANG  + HN +VMIA+ + G + DYKG RLA+IAI D++   
Sbjct: 73  ATFAAKFNQTPAFVFFVIANGNAALHNNLVMIAMEILGTRYDYKGPRLALIAILDMMTMA 132

Query: 124 LVSAGVNGAVYMAELGKYGNSHARWNKICDRFKTFCDHGGGAIIASFIGLALMIVISIIS 183
           L S G   A +M+ELGK GNSHA+W+KICD+F+T+CD G  A+I SF+G  L+++IS++S
Sbjct: 133 LASDGDGAATFMSELGKNGNSHAKWDKICDKFETYCDRGVVALIVSFVGFILLLIISVMS 192

Query: 184 IVKLAK 189
           I+KL K
Sbjct: 193 IIKLLK 198

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	200
TAIR|locus:2128649	197	AT4G20390 "AT4G20390" [Arabido	0.76	0.771	0.671	3.8e-53
TAIR|locus:2163386	197	AT5G44550 [Arabidopsis thalian	0.74	0.751	0.635	1.1e-50
TAIR|locus:2130479	193	AT4G15610 "AT4G15610" [Arabido	0.715	0.740	0.34	1.2e-17
TAIR|locus:2128776	164	AT4G03540 "AT4G03540" [Arabido	0.56	0.682	0.336	2.3e-14
TAIR|locus:2150986	187	CASP5 "Casparian strip membran	0.69	0.737	0.291	2.3e-14
TAIR|locus:2020773	164	AT1G03700 "AT1G03700" [Arabido	0.545	0.664	0.353	3.8e-14
TAIR|locus:2130509	190	AT4G15630 "AT4G15630" [Arabido	0.71	0.747	0.270	3.8e-14
UNIPROTKB|A2Y2B7	162	BLE3 "CASP-like protein BLE3"	0.545	0.672	0.318	2.1e-13
UNIPROTKB|Q84UT5	162	BLE3 "CASP-like protein BLE3"	0.545	0.672	0.318	2.1e-13
TAIR|locus:2130494	190	AT4G15620 "AT4G15620" [Arabido	0.72	0.757	0.246	5.6e-13

TAIR|locus:2128649 AT4G20390 "AT4G20390" [Arabidopsis thaliana (taxid:3702)]

 Score = 550 (198.7 bits), Expect = 3.8e-53, P = 3.8e-53
 Identities = 102/152 (67%), Positives = 124/152 (81%)

Query:    42 IVMGLNKETKTFVVATVGTTPIKATFSAKFQHTPAFVFFVIANGLVSFHNVVMIAVNLFG 101
             IVM LNKETKT VVAT+GT PIKAT +AKFQHTPAFVFFVIAN +VSFHN++MI V +F 
Sbjct:    35 IVMSLNKETKTLVVATIGTVPIKATLTAKFQHTPAFVFFVIANVMVSFHNLLMIVVQIFS 94

Query:   102 KKLDYKGLRLAMIAIFDLLNTVLVSAGVNGAVYMAELGKYGNSHARWNKICDRFKTFCDH 161
             +KL+YKGLRL  IAI D+LN  LVSA  N AV++AELGK GN HA+WNK+CDRF T+CDH
Sbjct:    95 RKLEYKGLRLLSIAILDMLNATLVSAAANAAVFVAELGKNGNKHAKWNKVCDRFTTYCDH 154

Query:   162 GGGAIIASFIGLALMIVISIISIVKLAKSKSN 193
             G GAIIA+F G+ LM+++S +SI +L  +  N
Sbjct:   155 GAGAIIAAFAGVILMLLVSAVSISRLLINSKN 186

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0000041 "transition metal ion transport" evidence=RCA

TAIR|locus:2163386 AT5G44550 [Arabidopsis thaliana (taxid:3702)]

 Score = 527 (190.6 bits), Expect = 1.1e-50, P = 1.1e-50
 Identities = 94/148 (63%), Positives = 120/148 (81%)

Query:    42 IVMGLNKETKTFVVATVGTTPIKATFSAKFQHTPAFVFFVIANGLVSFHNVVMIAVNLFG 101
             IVMGLNKETKTF+V  VG TPI+ATF+AKF HTPAFVFFV+AN +VSFHN++MIA+ +FG
Sbjct:    35 IVMGLNKETKTFIVGKVGNTPIQATFTAKFDHTPAFVFFVVANAMVSFHNLLMIALQIFG 94

Query:   102 KKLDYKGLRLAMIAIFDLLNTVLVSAGVNGAVYMAELGKYGNSHARWNKICDRFKTFCDH 161
              K+++ G RL  +AI D+LN  L+SA  N A +MAE+GK GN HARW+KICDRF T+CDH
Sbjct:    95 GKMEFTGFRLLSVAILDMLNVTLISAAANAAAFMAEVGKNGNKHARWDKICDRFATYCDH 154

Query:   162 GGGAIIASFIGLALMIVISIISIVKLAK 189
             G GA+IA+F G+ LM++IS  SI +L +
Sbjct:   155 GAGALIAAFAGVILMLIISAASISRLVQ 182

GO:0005576 "extracellular region" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0005515 "protein binding" evidence=IPI

TAIR|locus:2130479 AT4G15610 "AT4G15610" [Arabidopsis thaliana (taxid:3702)]

 Score = 215 (80.7 bits), Expect = 1.2e-17, P = 1.2e-17
 Identities = 51/150 (34%), Positives = 84/150 (56%)

Query:    42 IVMGLNKETKTFVVATVGTTPIKATFSAKFQHTPAFVFFVIANGLVSFHNVV--MIAVNL 99
             +VM  +K+TK   +   GT PI+   +A+F ++PA ++FV+A  +  F+++V   + V+ 
Sbjct:    46 VVMVTSKQTKNIFLP--GT-PIRIP-AAEFTNSPALIYFVVALSVACFYSIVSTFVTVSA 101

Query:   100 FGKKLDYKGLRLAMIAIFDLLNTVLVSAGVNGAVYMAELGKYGNSHARWNKICDRFKTFC 159
             F KK     + L  +AI D +   +V++       +A LG  GN   RW KIC  +  FC
Sbjct:   102 F-KKHSCSAVLLLNLAIMDAVMVGIVASATGAGGGVAYLGLKGNKEVRWGKICHIYDKFC 160

Query:   160 DHGGGAIIASFIGLALMIVISIISIVKLAK 189
              H GGAI  S     +++++SIIS++ L K
Sbjct:   161 RHVGGAIAVSLFASVVLLLLSIISVLSLYK 190

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0005794 "Golgi apparatus" evidence=IDA

GO:0006865 "amino acid transport" evidence=RCA

GO:0009407 "toxin catabolic process" evidence=RCA

GO:0010167 "response to nitrate" evidence=RCA

GO:0010583 "response to cyclopentenone" evidence=RCA

GO:0015706 "nitrate transport" evidence=RCA

GO:0005768 "endosome" evidence=IDA

GO:0005802 "trans-Golgi network" evidence=IDA

TAIR|locus:2128776 AT4G03540 "AT4G03540" [Arabidopsis thaliana (taxid:3702)]

 Score = 184 (69.8 bits), Expect = 2.3e-14, P = 2.3e-14
 Identities = 40/119 (33%), Positives = 72/119 (60%)

Query:    66 TFSAKFQHTPAFVFFVIANGLVSFHNVVMIAVNLFGKKLDYKGLRLAMIAIFDLLNTVLV 125
             +  AK+    AF +FVIAN +VS ++ ++    LF   L  + L    + + DL+ T+L+
Sbjct:    41 SLEAKYTDMAAFKYFVIANAVVSVYSFLV----LF---LPKESLLWKFVVVLDLVMTMLL 93

Query:   126 SAGVNGAVYMAELGKYGNSHARWNKICDRFKTFCDHGGGAIIASFIGLALMIVISIISI 184
             ++ ++ A+ +A++GK GN++A W  IC +   FCD   GA+IA F+ L L +++ + S+
Sbjct:    94 TSSLSAALAVAQVGKKGNANAGWLPICGQVPKFCDQITGALIAGFVALVLYVLLLLYSL 152

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2150986 CASP5 "Casparian strip membrane domain protein 5" [Arabidopsis thaliana (taxid:3702)]

 Score = 184 (69.8 bits), Expect = 2.3e-14, P = 2.3e-14
 Identities = 44/151 (29%), Positives = 81/151 (53%)

Query:    42 IVMGLNKETKTFVVATVGTTPIKATFSAKFQHTPAFVFFVIANGLVSFHNVVMIA---VN 98
             I+MG   ET  F    +        F A++   PA  FFV+AN +VS + ++ +    V+
Sbjct:    45 ILMGTTHETLPFFTQFI-------RFQAEYNDLPALTFFVVANAVVSGYLILSLTLAFVH 97

Query:    99 LFGKKLDYKGLRLAMIAIFDLLNTVLVSAGVNGAVYMAELGKYGNSHARWNKICDRFKTF 158
             +  +K   +  R+ +I I D+    L+++G + A  +  L   GN+   W  IC +F +F
Sbjct:    98 IVKRKT--QNTRILLI-ILDVAMLGLLTSGASSAAAIVYLAHNGNNKTNWFAICQQFNSF 154

Query:   159 CDHGGGAIIASFIGLALMIVISIISIVKLAK 189
             C+   G++I SFI + L+I++ ++S + L++
Sbjct:   155 CERISGSLIGSFIAIVLLILLILLSAIALSR 185

GO:0005739 "mitochondrion" evidence=ISM

GO:0005515 "protein binding" evidence=IPI

GO:0007043 "cell-cell junction assembly" evidence=IDA

GO:0042545 "cell wall modification" evidence=IMP

GO:0042803 "protein homodimerization activity" evidence=ISS

GO:0048226 "Casparian strip" evidence=IDA

TAIR|locus:2020773 AT1G03700 "AT1G03700" [Arabidopsis thaliana (taxid:3702)]

 Score = 182 (69.1 bits), Expect = 3.8e-14, P = 3.8e-14
 Identities = 41/116 (35%), Positives = 69/116 (59%)

Query:    69 AKFQHTPAFVFFVIANGLVSFHNVVMIAVNLFGKKLDYKGLRLAMIAIFDLLNTVLVSAG 128
             AK+    AF +FVIAN +V+ ++ ++    LF   L  + L    + + DL+ T+L+++ 
Sbjct:    44 AKYSDLAAFKYFVIANAIVTVYSFLV----LF---LPKESLLWKFVVVLDLMVTMLLTSS 96

Query:   129 VNGAVYMAELGKYGNSHARWNKICDRFKTFCDHGGGAIIASFIGLALMIVISIISI 184
             ++ AV +A++GK GN++A W  IC +   FCD   GA+IA  + L L + + I SI
Sbjct:    97 LSAAVAVAQVGKRGNANAGWLPICGQVPRFCDQITGALIAGLVALVLYVFLLIFSI 152

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2130509 AT4G15630 "AT4G15630" [Arabidopsis thaliana (taxid:3702)]

 Score = 182 (69.1 bits), Expect = 3.8e-14, P = 3.8e-14
 Identities = 40/148 (27%), Positives = 78/148 (52%)

Query:    43 VMGLNKETKTFVVATVGTTP-IKATFSAKFQHTPAFVFFVIANGLVSFHNVVMIAVNLFG 101
             V+G+ K+TK   +  + T P +  + +AK  +  AFV+ + AN +   +  + I + +  
Sbjct:    45 VLGVAKQTKVVPIKLIPTLPPLNVSTTAKASYLSAFVYNISANAIACGYTAISIVIVMIS 104

Query:   102 KKLDYKGLRLAMIAIFDLLNTVLV--SAGVNGAVYMAELGKYGNSHARWNKICDRFKTFC 159
             K    K L +A++ I DL+   L+  S G  GA+ +  +G++GN H  W K+C  F  FC
Sbjct:   105 KGKRSKSLLMAVL-IGDLMMVALLFSSTGAAGAIGL--MGRHGNKHVMWKKVCGVFGKFC 161

Query:   160 DHGGGAIIASFIGLALMIVISIISIVKL 187
             +    ++  + I   + +++ ++  +KL
Sbjct:   162 NQAAVSVAITLIASVVFMLLVVLDALKL 189

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0005886 "plasma membrane" evidence=IDA

GO:0005515 "protein binding" evidence=IPI

GO:0043424 "protein histidine kinase binding" evidence=IPI

GO:0009506 "plasmodesma" evidence=IDA

UNIPROTKB|A2Y2B7 BLE3 "CASP-like protein BLE3" [Oryza sativa Indica Group (taxid:39946)]

 Score = 175 (66.7 bits), Expect = 2.1e-13, P = 2.1e-13
 Identities = 37/116 (31%), Positives = 71/116 (61%)

Query:    69 AKFQHTPAFVFFVIANGLVSFHNVVMIAVNLFGKKLDYKGLRLAMIAIFDLLNTVLVSAG 128
             AK+ +TP+F+FFV+A  + + ++++++AV   G  L     RLA+    D++  ++++  
Sbjct:    43 AKYSYTPSFIFFVVAYAVAAAYSLLVLAVPA-GSALS----RLALTT--DVVLGMVLAGA 95

Query:   129 VNGAVYMAELGKYGNSHARWNKICDRFKTFCDHGGGAIIASFIGLALMIVISIISI 184
             V  A  ++++ K GNSHA W  +C +   +C+H   A+IA F+ LA+  V+ + S+
Sbjct:    96 VASAGAISDIAKNGNSHAGWLPVCGQIHAYCNHVMAALIAGFVALAVHFVVVMYSL 151

GO:0009733 "response to auxin stimulus" evidence=ISS

GO:0009741 "response to brassinosteroid stimulus" evidence=ISS

GO:0009826 "unidimensional cell growth" evidence=ISS

UNIPROTKB|Q84UT5 BLE3 "CASP-like protein BLE3" [Oryza sativa Japonica Group (taxid:39947)]

 Score = 175 (66.7 bits), Expect = 2.1e-13, P = 2.1e-13
 Identities = 37/116 (31%), Positives = 71/116 (61%)

Query:    69 AKFQHTPAFVFFVIANGLVSFHNVVMIAVNLFGKKLDYKGLRLAMIAIFDLLNTVLVSAG 128
             AK+ +TP+F+FFV+A  + + ++++++AV   G  L     RLA+    D++  ++++  
Sbjct:    43 AKYSYTPSFIFFVVAYAVAAAYSLLVLAVPA-GSALS----RLALTT--DVVLGMVLAGA 95

Query:   129 VNGAVYMAELGKYGNSHARWNKICDRFKTFCDHGGGAIIASFIGLALMIVISIISI 184
             V  A  ++++ K GNSHA W  +C +   +C+H   A+IA F+ LA+  V+ + S+
Sbjct:    96 VASAGAISDIAKNGNSHAGWLPVCGQIHAYCNHVMAALIAGFVALAVHFVVVMYSL 151

GO:0003824 "catalytic activity" evidence=ISS

GO:0008152 "metabolic process" evidence=ISS

GO:0009733 "response to auxin stimulus" evidence=IEP

GO:0009741 "response to brassinosteroid stimulus" evidence=IMP

GO:0009826 "unidimensional cell growth" evidence=IMP

GO:0035264 "multicellular organism growth" evidence=IMP

TAIR|locus:2130494 AT4G15620 "AT4G15620" [Arabidopsis thaliana (taxid:3702)]

 Score = 171 (65.3 bits), Expect = 5.6e-13, P = 5.6e-13
 Identities = 36/146 (24%), Positives = 72/146 (49%)

Query:    43 VMGLNKETKTFVVATVGTTP-IKATFSAKFQHTPAFVFFVIANGLVSFHNVVMIAVNLFG 101
             V+G+ K+TK   +  + T P +  T +AK  +  AFV+ +  N +   +  + IA+ +  
Sbjct:    45 VLGVAKQTKVVSIKLIPTLPPLDITTTAKASYLSAFVYNISVNAIACGYTAISIAILMIS 104

Query:   102 KKLDYKGLRLAMIAIFDLLNTVLVSAGVNGAVYMAELGKYGNSHARWNKICDRFKTFCDH 161
             +    K L L ++ + DL+   L+ +G   A  +  +G +GN H  W K+C  F  FC  
Sbjct:   105 RGRRSKKL-LMVVLLGDLVMVALLFSGTGAASAIGLMGLHGNKHVMWKKVCGVFGKFCHR 163

Query:   162 GGGAIIASFIGLALMIVISIISIVKL 187
                ++  + +   + + + ++  +KL
Sbjct:   164 AAPSLPLTLLAAVVFMFLVVLDAIKL 189

GO:0003674 "molecular_function" evidence=ND

GO:0005739 "mitochondrion" evidence=ISM

GO:0008150 "biological_process" evidence=ND

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q0ILZ7	CSPL6_ORYSJ	No assigned EC number	0.4147	0.845	0.8666	yes	no
B9SV63	CSPLC_RICCO	No assigned EC number	0.6648	0.89	0.8768	N/A	no
Q9FI10	CSPLW_ARATH	No assigned EC number	0.5965	0.88	0.8934	yes	no
A7QC16	CSPL1_VITVI	No assigned EC number	0.5931	1.0	0.9803	yes	no
D7MFJ8	CSPLC_ARALL	No assigned EC number	0.6309	0.835	0.8477	N/A	no
B9I0U9	CSPLB_POPTR	No assigned EC number	0.6358	0.965	0.9897	yes	no
B9GIE4	CSPL5_POPTR	No assigned EC number	0.6898	0.93	0.9346	yes	no
D7MM00	CSPLG_ARALL	No assigned EC number	0.6079	0.88	0.9025	N/A	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

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Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	200
TIGR01569	154	TIGR01569, A_tha_TIGR01569, plant integral membran	1e-45
pfam04535	150	pfam04535, DUF588, Domain of unknown function (DUF	1e-33

>gnl|CDD|233471 TIGR01569, A_tha_TIGR01569, plant integral membrane protein TIGR01569

 Score =  147 bits (374), Expect = 1e-45
 Identities = 61/161 (37%), Positives = 93/161 (57%), Gaps = 7/161 (4%)

Query: 27  LVLRLLALAATASATIVMGLNKETKTFVVATVGTTPIKATFSAKFQHTPAFVFFVIANGL 86
           L+LR+LA +AT +A IVMG N+ETK   V          TF AKF   PAFV+FV+AN +
Sbjct: 1   LILRVLAFSATLAAAIVMGTNRETKVVFVQ-------LITFKAKFSDLPAFVYFVVANAI 53

Query: 87  VSFHNVVMIAVNLFGKKLDYKGLRLAMIAIFDLLNTVLVSAGVNGAVYMAELGKYGNSHA 146
              ++++ + V++FG        +L  +   DL+   L+S+G + A  +A +GK GN  A
Sbjct: 54  ACGYSLLSLVVSIFGLLKRRVFFKLIALFFLDLVMLALLSSGTSAAAAVAYVGKLGNKEA 113

Query: 147 RWNKICDRFKTFCDHGGGAIIASFIGLALMIVISIISIVKL 187
            W KIC  F  FCD   G++  S   + L++++SI+S + L
Sbjct: 114 GWLKICGVFGKFCDRIAGSLALSLFAVILLVLLSILSAISL 154

This model describes a region of ~160 residues found exclusively in plant proteins, generally as the near complete length of the protein. At least 24 different members are found in Arabidopsis thaliana. Members have four predicted transmembrane regions, the last of which is preceded by an invariant CXXXXX[FY]C motif. The family is not functionally characterized. Length = 154

>gnl|CDD|218134 pfam04535, DUF588, Domain of unknown function (DUF588)

 Score =  117 bits (294), Expect = 1e-33
 Identities = 50/155 (32%), Positives = 74/155 (47%), Gaps = 13/155 (8%)

Query: 24  WVVLVLRLLALAATASATIVMGLNKETKTFVVATVGTTPIKATFSAKFQHTPAFVFFVIA 83
              LVLRL A     +A +VMG NK+TK F               A F   PAF + V+A
Sbjct: 6   LAELVLRLAAFVLALAAAVVMGTNKQTKPFF---------FIQKKASFSDLPAFRYLVVA 56

Query: 84  NGLVSFHNVVMI---AVNLFGKKLDYKGLRLAMIAIFDLLNTVLVSAGVNGAVYMAELGK 140
           N + + ++++ +      L  KK   KGL    + I D +   L+ A  + A  +  L +
Sbjct: 57  NAIAAGYSLLQLVLSVYLLSRKKPRTKGLAWL-LFILDQVMAYLLLAAASAAAAIVYLAR 115

Query: 141 YGNSHARWNKICDRFKTFCDHGGGAIIASFIGLAL 175
            GNSHA W KIC++F  FC+    ++  SF+   L
Sbjct: 116 NGNSHANWMKICNQFGRFCNRAAASVALSFLAFLL 150

This family of plant proteins contains a domain that may have a catalytic activity. It has a conserved arginine and aspartate that could form an active site. These proteins are predicted to contain 3 or 4 transmembrane helices. Length = 150

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	200
TIGR01569	154	A_tha_TIGR01569 plant integral membrane protein TI	100.0
PF04535	149	DUF588: Domain of unknown function (DUF588); Inter	100.0
PF01284	144	MARVEL: Membrane-associating domain; InterPro: IPR	98.57

>TIGR01569 A_tha_TIGR01569 plant integral membrane protein TIGR01569

Probab=100.00  E-value=3.8e-43  Score=282.93  Aligned_cols=153  Identities=41%  Similarity=0.658  Sum_probs=137.5

Q ss_pred             HHHHHHHHHHHHHHHHHHhccccceeEEeeeccCCccceeeeEEeeccCchHHHHHHHHHHHHHHHHHHHHHHhh-cCCc
Q 029003           27 LVLRLLALAATASATIVMGLNKETKTFVVATVGTTPIKATFSAKFQHTPAFVFFVIANGLVSFHNVVMIAVNLFG-KKLD  105 (200)
Q Consensus        27 l~LR~~a~~~slas~~vM~t~~qt~~~~~~~~g~~p~~~~~~a~f~~~~af~ylv~an~I~~~Ysllql~~~~~~-k~~~  105 (200)
                      ++||+++++++++|+++|+||+|+.++..+       .+++++||+|+++|+|+|++|+|+++|+++|+++++.. ++..
T Consensus         1 l~LR~~~~~~sl~A~vvm~t~~qt~~~~~~-------~~~~~a~f~d~~af~y~v~anai~~~Ysll~l~~~~~~~~~~~   73 (154)
T TIGR01569         1 LILRVLAFSATLAAAIVMGTNRETKVVFVQ-------LITFKAKFSDLPAFVYFVVANAIACGYSLLSLVVSIFGLLKRR   73 (154)
T ss_pred             CcHHHHHHHHHHHHHHHhhcccceeeeecc-------cceeeeeeeccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence            479999999999999999999999987411       26789999999999999999999999999999988652 1111


Q ss_pred             cchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccchhccccccccchhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 029003          106 YKGLRLAMIAIFDLLNTVLVSAGVNGAVYMAELGKYGNSHARWNKICDRFKTFCDHGGGAIIASFIGLALMIVISIISIV  185 (200)
Q Consensus       106 ~~~~~~~~~f~~Dqv~ayLL~saasAA~~i~~l~~~G~~~~~W~~vC~~~~~FC~~~~~Si~lsflA~l~~~~~s~lSa~  185 (200)
                      ....+|+ +|++||+++||++||++||+++++++|+||+|.+|+++|+.+++||||+++|++++|+|++++++++++|++
T Consensus        74 ~~~~~~~-~f~~D~v~~~Ll~sa~sAA~av~~l~~~G~~~~~W~~iC~~~~~FC~~~~~sl~~s~~a~v~~~llsv~Sa~  152 (154)
T TIGR01569        74 VFFKLIA-LFFLDLVMLALLSSGTSAAAAVAYVGKLGNKEAGWLKICGVFGKFCDRIAGSLALSLFAVILLVLLSILSAI  152 (154)
T ss_pred             chhHHHH-HHHHhHHHHHHHHHHHHHHHHHHHHHHccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            2244677 499999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             Hh
Q 029003          186 KL  187 (200)
Q Consensus       186 ~L  187 (200)
                      ++
T Consensus       153 ~~  154 (154)
T TIGR01569       153 SL  154 (154)
T ss_pred             cC
Confidence            75

This model describes a region of ~160 residues found exclusively in plant proteins, generally as the near complete length of the protein. At least 24 different members are found in Arabidopsis thaliana. Members have four predicted transmembrane regions, the last of which is preceded by an invariant CXXXXX[FY]C motif. The family is not functionally characterized.

>PF04535 DUF588: Domain of unknown function (DUF588); InterPro: IPR006702 This family of plant proteins contains a domain that may have a catalytic activity

Probab=100.00  E-value=1.5e-38  Score=254.02  Aligned_cols=146  Identities=32%  Similarity=0.544  Sum_probs=132.7

Q ss_pred             CCcchhHHHHHHHHHHHHHHHHHHHhccccceeEEeeeccCCccceeeeEEeeccCchHHHHHHHHHHHHHHHHHHHHHH
Q 029003           20 KPKGWVVLVLRLLALAATASATIVMGLNKETKTFVVATVGTTPIKATFSAKFQHTPAFVFFVIANGLVSFHNVVMIAVNL   99 (200)
Q Consensus        20 ~~~~~~~l~LR~~a~~~slas~~vM~t~~qt~~~~~~~~g~~p~~~~~~a~f~~~~af~ylv~an~I~~~Ysllql~~~~   99 (200)
                      |+.+.++++||+++++++++|+++|++|+|+.++.         .++++++|+|+++|+|++++|+|+++|+++|++.++
T Consensus         1 ~~~~~~~l~LR~~~~~~sl~a~~vm~t~~qt~~~~---------~~~~~~~f~~~~af~ylv~a~~i~~~Ysl~~~~~~~   71 (149)
T PF04535_consen    1 RSLRIASLVLRLLAFVLSLAALAVMATNKQTVSVF---------SIQFTAKFSDYPAFRYLVAANVIACVYSLLQLVLSI   71 (149)
T ss_pred             CCchhhhHHHHHHHHHHHHHHHHHHHhcCCcceee---------ccccceeecccHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            45688999999999999999999999999998773         567899999999999999999999999999999987


Q ss_pred             h---hcCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccchhccccccccchhhHHHHHHHHHHHHHH
Q 029003          100 F---GKKLDYKGLRLAMIAIFDLLNTVLVSAGVNGAVYMAELGKYGNSHARWNKICDRFKTFCDHGGGAIIASFIGLAL  175 (200)
Q Consensus       100 ~---~k~~~~~~~~~~~~f~~Dqv~ayLL~saasAA~~i~~l~~~G~~~~~W~~vC~~~~~FC~~~~~Si~lsflA~l~  175 (200)
                      .   +++..++...|++ |++||+++||++||++||+++++++++|+++.+|+++|+.+++||+|+++|++++|+|+++
T Consensus        72 ~~~~~~~~~~~~~~~~~-f~~Dqv~~~ll~sa~~Aa~~~~~~~~~g~~~~~W~~vC~~~~~FC~~~~~sv~lsf~a~~~  149 (149)
T PF04535_consen   72 YSLSRGKLRSKLLAWFL-FILDQVLAYLLFSAASAAAAVAYLGKKGNSHVQWSKVCSQFGKFCNRAAASVALSFLAFVA  149 (149)
T ss_pred             HHHHccCCcccchhhhh-hhHHHHHHHHHHHHHHHHHHHHHHHHhccccccchhhccchhhHHHHHHHHHHHHHHHHHC
Confidence            6   2223345566774 9999999999999999999999999999999999999999999999999999999999974

It has a conserved arginine and aspartate that could form an active site. These proteins are predicted to contain 3 or 4 transmembrane helices.

>PF01284 MARVEL: Membrane-associating domain; InterPro: IPR021128 This entry represents the ~130-residue MARVEL (MAL and related proteins for vesicle trafficking and membrane link) domain

Probab=98.57  E-value=2.1e-06  Score=66.34  Aligned_cols=140  Identities=18%  Similarity=0.085  Sum_probs=99.0

Q ss_pred             chhHHHHHHHHHHHHHHHHHHHhccccceeEEeeeccCCccceeeeEEeeccCchHHHHHHHHHHHHHHHHHHHHHHhh-
Q 029003           23 GWVVLVLRLLALAATASATIVMGLNKETKTFVVATVGTTPIKATFSAKFQHTPAFVFFVIANGLVSFHNVVMIAVNLFG-  101 (200)
Q Consensus        23 ~~~~l~LR~~a~~~slas~~vM~t~~qt~~~~~~~~g~~p~~~~~~a~f~~~~af~ylv~an~I~~~Ysllql~~~~~~-  101 (200)
                      +....+||+++++++++.+.+++....+..               .......++..|.+.+.++...+++..++..... 
T Consensus         3 ~s~~~ilR~lq~~~~~i~~~l~~~~~~~~~---------------~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~   67 (144)
T PF01284_consen    3 RSPSGILRILQLVFALIIFGLVASSIATGS---------------QIYGGSPSACGFALFVAVLSFLYTLIFLLLYLFSL   67 (144)
T ss_pred             ccHhHHHHHHHHHHHHHHHHHHHHHHhccc---------------cccCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            455789999999999999999988764221               1245566778999999999999998888877653 


Q ss_pred             cCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccchhccccccccchhhHHHHHHHHHHHHHHHHHHHH
Q 029003          102 KKLDYKGLRLAMIAIFDLLNTVLVSAGVNGAVYMAELGKYGNSHARWNKICDRFKTFCDHGGGAIIASFIGLALMIVISI  181 (200)
Q Consensus       102 k~~~~~~~~~~~~f~~Dqv~ayLL~saasAA~~i~~l~~~G~~~~~W~~vC~~~~~FC~~~~~Si~lsflA~l~~~~~s~  181 (200)
                      +...+....+. ++..|.+++.+-+.+..+-+.-....+.+++   +.+.+...++-|+...++.++++++++++..+.+
T Consensus        68 ~~~~~~~~~~~-~~~~~~v~~il~l~a~~~~a~~~~~~~~~~~---~~~~~~~~~~~~~~~~Aa~~f~~~~~~l~~~s~~  143 (144)
T PF01284_consen   68 KYRPRIPWPLV-EFIFDAVFAILWLAAFIALAAYLSDHSCSNT---GNDYSYSGCSRCGAWKAAAAFGFLNWLLFIVSAV  143 (144)
T ss_pred             hcccccccchh-HHHHHHHHHHHHHHHHHHHHHHhcCcccccC---CCCcCCCCCCcchhHHHHHHHHHHHHHHHHHHHH
Confidence            11112233344 4899999999998877666543322122211   2233445567899999999999999999988765

The MARVEL domain is a module with a four transmembrane-helix architecture that has been identified in proteins of the myelin and lymphocyte (MAL), physins, gyrins and occludin families. All described MARVEL domain-containing proteins are consistent with the M-shaped topology: four transmembrane-helix region architecture with cytoplasmic N- and C-terminal regions. Their function could be related to cholesterol-rich membrane apposition events in a variety of cellular processes, such as biogenesis of vesicular transport carriers or tight junction regulation [].

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Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00