Citrus Sinensis ID: 029005

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200
Protein Sequence
MPPKFFPPRRRITHPLIWLIAIICTILAIAVIIAGIVVFTGYLVMHPRIPVMSVVGAHLDLFQYDEAGLLETQVTIVIRMRNGNAKAGASFSDTSVYLFFDGLKIAQLVADPFEVSKNSSVDFNYVVESRPVPLDPELQEFADTSLKKDVVRFDLKGGSRTRWRIGVLGSVKFWCRLDCQLKFHPSNGSYIPSRCSSTTK
Secondary Structure (PSIPRED)
cccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEcccccEEEEEEEEEEEEEccccccEEEEEEEEEEEEccccEEEEEEEcEEEEEEEccEEEEEEEccccccccccEEEEEEEEEcccccccHHHHHHHHHcccccEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEcccccEEccccccccc
Secondary Structure Prediction (SSPRO)
ccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccEEEEEcEEEEEEEEcccccccEEEEEEEEEEcccccEEEEEEEEEEEEEEccEEEEEEEcccccccccccEEEEEEEEcccccccHHHHHHHHHHHHcccEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEcccccEEEccccccccc
Coil and Loop (DISEMBL)
mppkffpprrrithpLIWLIAIICTILAIAVIIAGIVVFTGylvmhpripvmSVVGAHldlfqydeaglleTQVTIVIRMRngnakagasfsdtsvyLFFDGLKIAQlvadpfevsknssvdfnyvvesrpvpldpelqefadtslkkdvvrfdlkggsrtrwriGVLGSVKFWCrldcqlkfhpsngsyipsrcssttk
Flexible Loop (DISEMBL)
mppkffpprrrITHPLIWLIAIICTILAIAVIIAGIVVFTGYLVMHPRIPVMSVVGAHLDLFQYDEAGLLETQVTIVIRMRNGNAKAGASFSDTSVYLFFDGLKIAQLVADPFEVSKNSSVDFNYVVESrpvpldpelqefadtslkkdvvrfdlkggsrtrwrigVLGSVKFWCRLDCQLkfhpsngsyipsrcssttk
Low Complexity Region (SEG)
MPPKFFPPRRRITHPliwliaiictilaiaviiagivvFTGYLVMHPRIPVMSVVGAHLDLFQYDEAGLLETQVTIVIRMRNGNAKAGASFSDTSVYLFFDGLKIAQLVADPFEVSKNSSVDFNYVVESRPVPLDPELQEFADTSLKKDVVRFDLKGGSRTRWRIGVLGSVKFWCRLDCQLKFHPSNGSYIPSRCSSTTK
Disordered region (IsUnstruct)
*********RRITHPLIWLIAIICTILAIAVIIAGIVVFTGYLVMHPRIPVMSVVGAHLDLFQYDEAGLLETQVTIVIRMRNGNAKAGASFSDTSVYLFFDGLKIAQLVADPFEVSKNSSVDFNYVVESRPVPLDPELQEFADTSLKKDVVRFDLKGGSRTRWRIGVLGSVKFWCRLDCQLKFHP***************
Disordered Region (DISOPRED)
***************LIWLIAIICTILAIAVIIAGIVVFTGYLVMHPRIPVMSVVGAHLDLFQYDEAGLLETQVTIVIRMRNGNAKAGASFSDTSVYLFFDGLKIAQLVADPFEVSKNSSVDFNYVVESRPVPLDPELQ*****SLKKDVVRFDLKGGSRTRWRIGVLGSVKFWCRLDCQLKFHPSNGSY****C*****
Disordered Region (DISEMBL)
MPPKFFPPRRRITHPLIWLIAIICTILAIAVIIAGIVVFTGYLVMHPRIPVMSVVGAHLDLFQYDEAGLLETQVTIVIRMRNGNAKAGASFSDTSVYLFFDGLKIAQLVADPFEVSKNSSVDFNYVVESRPVPLDPELQEFADTSLKKDVVRFDLKGGSRTRWRIGVLGSVKFWCRLDCQLKFHPSNGSY**********
Disordered Region (DISPRO)
*****FPP*RRITHPLIWLIAIICTILAIAVIIAGIVVFTGYLVMHPRIPVMSVVGAHLDLFQYDEAGLLETQVTIVIRMRNGNAKAGASFSDTSVYLFFDGLKIAQLVADPFEVSKNSSVDFNYVVESRPVPLDPELQEFADTSLKKDVVRFDLKGGSRTRWRIGVLGSVKFWCRLDCQLKFHPSNGSYIPSRC*****
Transmembrane Helix (TMHMM)
iiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MPPKFFPPRRRITHPLIWLIAIICTILAIAVIIAGIVVFTGYLVMHPRIPVMSVVGAHLDLFQYDEAGLLETQVTIVIRMRNGNAKAGASFSDTSVYLFFDGLKIAQLVADPFEVSKNSSVDFNYVVESRPVPLDPELQEFADTSLKKDVVRFDLKGGSRTRWRIGVLGSVKFWCRLDCQLKFHPSNGSYIPSRCSSTTK
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	200
449465669	200	PREDICTED: uncharacterized protein LOC10	1.0	1.0	0.615	1e-67
356529801	217	PREDICTED: uncharacterized protein LOC10	0.97	0.894	0.610	1e-65
255557789	201	conserved hypothetical protein [Ricinus	0.985	0.980	0.615	2e-65
356495274	229	PREDICTED: uncharacterized protein LOC10	0.94	0.820	0.624	1e-63
225427631	201	PREDICTED: uncharacterized protein LOC10	0.975	0.970	0.557	4e-63
147818907	687	hypothetical protein VITISV_035515 [Viti	0.94	0.273	0.579	3e-62
224070748	184	predicted protein [Populus trichocarpa]	0.915	0.994	0.625	4e-61
357517437	203	hypothetical protein MTR_8g072140 [Medic	0.94	0.926	0.569	2e-55
224129932	173	predicted protein [Populus trichocarpa]	0.86	0.994	0.624	2e-55
356560847	203	PREDICTED: uncharacterized protein LOC10	0.935	0.921	0.593	6e-54

>gi|449465669|ref|XP_004150550.1| PREDICTED: uncharacterized protein LOC101214190 [Cucumis sativus] gi|449512899|ref|XP_004164173.1| PREDICTED: uncharacterized LOC101214190 [Cucumis sativus]

 Score =  261 bits (667), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 123/200 (61%), Positives = 152/200 (76%)

Query: 1   MPPKFFPPRRRITHPLIWLIAIICTILAIAVIIAGIVVFTGYLVMHPRIPVMSVVGAHLD 60
           MPPK     +R THPL+WL A++CT+++IAVII GIVVF GYLV+HPRIP +S++ AHLD
Sbjct: 1   MPPKLISDAKRHTHPLVWLAALLCTVVSIAVIIGGIVVFIGYLVIHPRIPTISILDAHLD 60

Query: 61  LFQYDEAGLLETQVTIVIRMRNGNAKAGASFSDTSVYLFFDGLKIAQLVADPFEVSKNSS 120
            FQ D AG LE Q+TI+I  +N NAKA ASFSD+S +L F G+KIAQLVADPFEV KNSS
Sbjct: 61  NFQIDIAGRLEVQLTIIIEAKNDNAKAHASFSDSSFFLHFLGIKIAQLVADPFEVRKNSS 120

Query: 121 VDFNYVVESRPVPLDPELQEFADTSLKKDVVRFDLKGGSRTRWRIGVLGSVKFWCRLDCQ 180
           + F Y V S  +PL+PE  E  D+ LK D+ RFDL G +R +WR+G+LGSVK+ C L C 
Sbjct: 121 MKFPYAVVSNSIPLNPEQMESVDSDLKADLSRFDLIGNTRVQWRVGLLGSVKYECHLHCG 180

Query: 181 LKFHPSNGSYIPSRCSSTTK 200
           LKFHPSNG+Y+ S CSS  K
Sbjct: 181 LKFHPSNGTYLSSPCSSRVK 200

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356529801|ref|XP_003533476.1| PREDICTED: uncharacterized protein LOC100787678 [Glycine max]

 Score =  254 bits (649), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 124/203 (61%), Positives = 151/203 (74%), Gaps = 9/203 (4%)

Query: 7   PPRRRI--------THPLIWLIAIICTILAIAVIIAGIVVFTGYLVMHPRIPVMSVVGAH 58
           P RRR+        THPLIWL AI+CTI+AI V+IAGIVVF GY+V+HPRIPVMS+  AH
Sbjct: 15  PIRRRLVNTHHSGKTHPLIWLAAILCTIIAIGVVIAGIVVFVGYMVIHPRIPVMSITNAH 74

Query: 59  LDLFQYDEAGLLETQVTIVIRMRNGNAKAGASFSDTSVYLFFDGLKIAQLVADPFEVSKN 118
           LDL   D AGLL+TQ+TI++  +NGNAKA A+FSD    L + G +IA + A PF+V KN
Sbjct: 75  LDLLSNDYAGLLQTQLTIIVVAQNGNAKAHATFSDIRFNLSYQGQRIALMRAPPFDVPKN 134

Query: 119 SSVDFNYVVESRPVPLDPELQEFADTSLKKDVVRFDLKGGSRTRWRIGVLGSVKFWCRLD 178
           SS   NYVV +  +PL P+  E  D S K+DV+ FDLKG +RTRWR+G LGSVKFWC L+
Sbjct: 135 SSKSLNYVVRAASIPLTPQQMEEVDESWKRDVIGFDLKGSARTRWRVGPLGSVKFWCNLE 194

Query: 179 CQLKFHPSNGSYI-PSRCSSTTK 200
           CQLKFHPSNGSYI  SRC+S +K
Sbjct: 195 CQLKFHPSNGSYIHHSRCTSKSK 217

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255557789|ref|XP_002519924.1| conserved hypothetical protein [Ricinus communis] gi|223540970|gb|EEF42528.1| conserved hypothetical protein [Ricinus communis]

 Score =  253 bits (647), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 123/200 (61%), Positives = 150/200 (75%), Gaps = 3/200 (1%)

Query: 2   PPKFFPPRRRITHPLIWLIAIICTILAIAVIIAGIVVFTGYLVMHPRIPVMSVVGAHLDL 61
           P K+  P+R  T    WL AIIC++L IAVI+AGIVVF GYLV+HPRIP++SV+ AHL+ 
Sbjct: 4   PKKYHDPQR--TSLFWWLAAIICSVLTIAVIVAGIVVFVGYLVIHPRIPIISVLNAHLNQ 61

Query: 62  FQYDEAGLLETQVTIVIRMRNGNAKAGASFSDTSVYLFFDGLKIAQLVADPFEVSKNSSV 121
           FQYD+AG+L TQV I++R  N N KA ASFSD  + LFFDGL IA LVA P+EV KNS+V
Sbjct: 62  FQYDQAGVLVTQVNIIVRSENDNTKAHASFSDMKLTLFFDGLAIAHLVAGPYEVKKNSTV 121

Query: 122 DFNYVVESRPVPLDPELQEFADTSLKKDVVRFDLKGGSRTRWRIGVLGSVKFWCRLDCQL 181
           DFNYV  S P+PL+PE  +  D  L +D VRFDLKG +R RWR+G+LGSVKF C L CQL
Sbjct: 122 DFNYVATSDPIPLNPEQMKDVDAFLNEDEVRFDLKGNARARWRVGLLGSVKFQCHLSCQL 181

Query: 182 KFHPSNGSYIPSR-CSSTTK 200
           KF+ S+G YIP R C+S  K
Sbjct: 182 KFYRSSGIYIPGRHCTSKAK 201

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356495274|ref|XP_003516504.1| PREDICTED: uncharacterized protein LOC100819030 [Glycine max]

 Score =  247 bits (631), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 118/189 (62%), Positives = 145/189 (76%), Gaps = 1/189 (0%)

Query: 13  THPLIWLIAIICTILAIAVIIAGIVVFTGYLVMHPRIPVMSVVGAHLDLFQYDEAGLLET 72
           THPLIWL AI+CTI+AI V+IAGIVVF GY+V+HPRIPV+S+  AHLDL   D  GLL+T
Sbjct: 41  THPLIWLAAILCTIIAIGVVIAGIVVFVGYMVIHPRIPVISITNAHLDLLSNDYTGLLQT 100

Query: 73  QVTIVIRMRNGNAKAGASFSDTSVYLFFDGLKIAQLVADPFEVSKNSSVDFNYVVESRPV 132
           Q+TI++  +NGNAKA A+FSD    L + G  IA ++A PF+V+KNSS   NYVV S  +
Sbjct: 101 QLTIIVVAQNGNAKAHATFSDIRFNLSYQGQGIAVMLAPPFDVAKNSSKPLNYVVRSASI 160

Query: 133 PLDPELQEFADTSLKKDVVRFDLKGGSRTRWRIGVLGSVKFWCRLDCQLKFHPSNGSYI- 191
           PL PE  E  D S K+DV+ FDLKG +RTRWR+G LGSVKFWC L+CQL+F PSNGSYI 
Sbjct: 161 PLTPEQMEEVDESWKRDVIGFDLKGSARTRWRVGPLGSVKFWCNLECQLRFRPSNGSYIH 220

Query: 192 PSRCSSTTK 200
            SRC+S +K
Sbjct: 221 HSRCTSESK 229

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225427631|ref|XP_002269914.1| PREDICTED: uncharacterized protein LOC100252848 [Vitis vinifera]

 Score =  246 bits (628), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 112/201 (55%), Positives = 149/201 (74%), Gaps = 6/201 (2%)

Query: 6   FPPRRRI------THPLIWLIAIICTILAIAVIIAGIVVFTGYLVMHPRIPVMSVVGAHL 59
            PPR+ +      THPL+W  A+IC  +A+AVI+AG+ VF GYLV+HPR+P ++V  A L
Sbjct: 1   MPPRKLVVGSGQKTHPLVWCAAVICVFIALAVIVAGVCVFVGYLVIHPRVPALTVTDARL 60

Query: 60  DLFQYDEAGLLETQVTIVIRMRNGNAKAGASFSDTSVYLFFDGLKIAQLVADPFEVSKNS 119
           D   + +AG+++ Q+T+ IR  N NAKA ASFSDTS+ + F  ++IA+LVA PF+VSKNS
Sbjct: 61  DRLDFSQAGVMDVQMTVYIRAENHNAKAHASFSDTSLTMSFHEIEIAKLVAYPFDVSKNS 120

Query: 120 SVDFNYVVESRPVPLDPELQEFADTSLKKDVVRFDLKGGSRTRWRIGVLGSVKFWCRLDC 179
           S+DFNYVVES  +PL     +F D SLK+D ++FDLKG S+T WRIG+LGSV  WC L+C
Sbjct: 121 SIDFNYVVESSSIPLGSRDMDFVDRSLKEDKIKFDLKGSSKTHWRIGLLGSVTLWCHLNC 180

Query: 180 QLKFHPSNGSYIPSRCSSTTK 200
           +L+FHPSN SYI S CSS +K
Sbjct: 181 ELRFHPSNSSYIHSYCSSKSK 201

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147818907|emb|CAN78292.1| hypothetical protein VITISV_035515 [Vitis vinifera]

 Score =  243 bits (620), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 109/188 (57%), Positives = 144/188 (76%)

Query: 13  THPLIWLIAIICTILAIAVIIAGIVVFTGYLVMHPRIPVMSVVGAHLDLFQYDEAGLLET 72
           THPL+W  A+IC  +A+AVI+AG+ VF GYLV+HPR+P ++V  A LD   + +AG+++ 
Sbjct: 500 THPLVWCAAVICVFIALAVIVAGVCVFVGYLVIHPRVPALTVTDARLDRLDFSQAGVMDV 559

Query: 73  QVTIVIRMRNGNAKAGASFSDTSVYLFFDGLKIAQLVADPFEVSKNSSVDFNYVVESRPV 132
           Q+T+ IR  N NAKA ASFSDTS+ + F  ++IA+LVA PF+VSKNSS+DFNYVVES  +
Sbjct: 560 QMTVYIRAENHNAKAHASFSDTSLTMSFHEIEIAKLVAYPFDVSKNSSIDFNYVVESSSI 619

Query: 133 PLDPELQEFADTSLKKDVVRFDLKGGSRTRWRIGVLGSVKFWCRLDCQLKFHPSNGSYIP 192
           PL     +F D SLK+D ++FDLKG S+T WRIG+LGSV  WC L+C+L+FHPSN SYI 
Sbjct: 620 PLGSRDMDFVDRSLKEDKIKFDLKGSSKTHWRIGLLGSVTLWCHLNCELRFHPSNSSYIH 679

Query: 193 SRCSSTTK 200
           S CSS +K
Sbjct: 680 SYCSSKSK 687

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224070748|ref|XP_002303223.1| predicted protein [Populus trichocarpa] gi|222840655|gb|EEE78202.1| predicted protein [Populus trichocarpa]

 Score =  239 bits (611), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 115/184 (62%), Positives = 140/184 (76%), Gaps = 1/184 (0%)

Query: 18  WLIAIICTILAIAVIIAGIVVFTGYLVMHPRIPVMSVVGAHLDLFQYDEAGLLETQVTIV 77
           W  AI+C +L  AVIIAGI+VF GYLV+HPRIPV+SVV AHL  F YD AG+L TQ+ IV
Sbjct: 1   WCAAILCALLTTAVIIAGIIVFVGYLVIHPRIPVISVVDAHLLHFSYDGAGILVTQINIV 60

Query: 78  IRMRNGNAKAGASFSDTSVYLFFDGLKIAQL-VADPFEVSKNSSVDFNYVVESRPVPLDP 136
           +R +N N KA ASFS+ ++ LFFDG++IA L  A P+EV KNSSVDFNY   S P+PL+P
Sbjct: 61  VRSKNDNMKAHASFSNFNLELFFDGIRIAVLSTASPYEVRKNSSVDFNYDYTSDPIPLNP 120

Query: 137 ELQEFADTSLKKDVVRFDLKGGSRTRWRIGVLGSVKFWCRLDCQLKFHPSNGSYIPSRCS 196
           +  +  D  LK+D VRFDLKGG+R RW++GVLGSV FW  L+CQL FHPSNGSYI  RC+
Sbjct: 121 KQMDDVDAYLKEDEVRFDLKGGARARWKVGVLGSVGFWSHLNCQLHFHPSNGSYISRRCT 180

Query: 197 STTK 200
           S  K
Sbjct: 181 SKAK 184

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357517437|ref|XP_003629007.1| hypothetical protein MTR_8g072140 [Medicago truncatula] gi|355523029|gb|AET03483.1| hypothetical protein MTR_8g072140 [Medicago truncatula]

 Score =  221 bits (562), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 107/188 (56%), Positives = 134/188 (71%)

Query: 13  THPLIWLIAIICTILAIAVIIAGIVVFTGYLVMHPRIPVMSVVGAHLDLFQYDEAGLLET 72
           T P +WL AIICTI AIAV I GIVVF GY+++HPR P++SV  AHLDL + D AGLL+T
Sbjct: 16  TKPFVWLAAIICTIFAIAVTITGIVVFIGYILIHPRAPIISVTNAHLDLLRNDHAGLLQT 75

Query: 73  QVTIVIRMRNGNAKAGASFSDTSVYLFFDGLKIAQLVADPFEVSKNSSVDFNYVVESRPV 132
           Q++IV+   NGNAKA A+FS  +  L F G  IA LVAD F+V KNS+ D  YVV+S  +
Sbjct: 76  QLSIVVTAYNGNAKAHATFSKITFSLSFQGQGIAMLVADSFDVPKNSTNDLRYVVQSSSI 135

Query: 133 PLDPELQEFADTSLKKDVVRFDLKGGSRTRWRIGVLGSVKFWCRLDCQLKFHPSNGSYIP 192
           PL P+  +  D S K++ + FD KG +RTRWRIG   SVK+ C L+C LKF P NGSYI 
Sbjct: 136 PLTPDQIDKIDESWKRNEIGFDFKGAARTRWRIGPFRSVKYSCHLNCYLKFRPLNGSYIH 195

Query: 193 SRCSSTTK 200
           S+CSS +K
Sbjct: 196 SKCSSKSK 203

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224129932|ref|XP_002328839.1| predicted protein [Populus trichocarpa] gi|222839137|gb|EEE77488.1| predicted protein [Populus trichocarpa]

 Score =  220 bits (561), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 108/173 (62%), Positives = 132/173 (76%), Gaps = 1/173 (0%)

Query: 29  IAVIIAGIVVFTGYLVMHPRIPVMSVVGAHLDLFQYDEAGLLETQVTIVIRMRNGNAKAG 88
           +AVIIAGIV+F GY+V+HPR+PV+SVV A+L  F YD AG+L TQV I++R +N N KA 
Sbjct: 1   MAVIIAGIVIFIGYMVIHPRVPVISVVSAYLPHFNYDGAGVLVTQVNILVRSKNDNMKAH 60

Query: 89  ASFSDTSVYLFFDGLKIAQL-VADPFEVSKNSSVDFNYVVESRPVPLDPELQEFADTSLK 147
           A FS+ ++ LFFDG +IA L  A P+EV KNSSVDFNY   S P+PL+P      D SLK
Sbjct: 61  ARFSNFNLELFFDGNRIAVLSTATPYEVKKNSSVDFNYEYTSDPIPLNPMQMNHVDESLK 120

Query: 148 KDVVRFDLKGGSRTRWRIGVLGSVKFWCRLDCQLKFHPSNGSYIPSRCSSTTK 200
           KD V F+LKGG RT+WR+GVLGSVKF C L+CQL+F PSNGSYI  RCSS +K
Sbjct: 121 KDEVSFELKGGVRTQWRVGVLGSVKFLCHLNCQLQFRPSNGSYITRRCSSRSK 173

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356560847|ref|XP_003548698.1| PREDICTED: uncharacterized protein LOC100797168 [Glycine max]

 Score =  216 bits (549), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 111/187 (59%), Positives = 145/187 (77%)

Query: 13  THPLIWLIAIICTILAIAVIIAGIVVFTGYLVMHPRIPVMSVVGAHLDLFQYDEAGLLET 72
           T+PL+WL+AIICTI+A+AV++ GIVVF GY+V+HPR+PV+SV  AHLDL + D AGLL+T
Sbjct: 16  TNPLVWLVAIICTIIAVAVVVVGIVVFIGYIVIHPRVPVISVTNAHLDLLRNDYAGLLQT 75

Query: 73  QVTIVIRMRNGNAKAGASFSDTSVYLFFDGLKIAQLVADPFEVSKNSSVDFNYVVESRPV 132
           Q+TIV+  +NGNAKA ASFS  +  + + G  IA LVADPFEV KNSS D +YVV+S  +
Sbjct: 76  QLTIVVTAKNGNAKAHASFSAITFNISYQGQDIAVLVADPFEVPKNSSKDLSYVVQSSSI 135

Query: 133 PLDPELQEFADTSLKKDVVRFDLKGGSRTRWRIGVLGSVKFWCRLDCQLKFHPSNGSYIP 192
           PL P+  E  + + K++ + FD KG +RT+WR+G LGSVKF C LDC LKF P NG+YIP
Sbjct: 136 PLTPDQMEEVNDAWKRNEIEFDFKGAARTQWRVGPLGSVKFLCHLDCDLKFRPVNGTYIP 195

Query: 193 SRCSSTT 199
           SRC+S +
Sbjct: 196 SRCTSKS 202

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

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Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	200
TAIR|locus:2158465	198	AT5G45320 "AT5G45320" [Arabido	0.81	0.818	0.561	7.9e-46
TAIR|locus:2125157	227	AT4G01410 "AT4G01410" [Arabido	0.795	0.700	0.265	3.5e-11
TAIR|locus:2031840	317	AT1G13050 "AT1G13050" [Arabido	0.78	0.492	0.242	4e-08
TAIR|locus:2131478	268	AT4G26490 "AT4G26490" [Arabido	0.77	0.574	0.228	1.7e-05
TAIR|locus:2059274	260	AT2G27080 "AT2G27080" [Arabido	0.755	0.580	0.253	3.1e-05
TAIR|locus:2039210	210	NHL12 "AT2G35960" [Arabidopsis	0.705	0.671	0.229	0.00011
TAIR|locus:504956450	210	AT5G22200 "AT5G22200" [Arabido	0.7	0.666	0.195	0.00093

TAIR|locus:2158465 AT5G45320 "AT5G45320" [Arabidopsis thaliana (taxid:3702)]

 Score = 481 (174.4 bits), Expect = 7.9e-46, P = 7.9e-46
 Identities = 91/162 (56%), Positives = 118/162 (72%)

Query:    39 FTGYLVMHPRIPVMSVVGAHLDLFQYDEAGLLETQVTIVIRMRNGNAKAGASFSDTSVYL 98
             F GYLV+HPR+P++SV  AHLD  +YD  G+L+TQ+TIVIR+ N NAKA A F +T   L
Sbjct:    36 FVGYLVIHPRVPIISVADAHLDFLKYDIVGVLQTQLTIVIRVENDNAKAHALFDETEFKL 95

Query:    99 FFDGLKIAQLVADPFEVSKNSSVDFNYVVESRPVPLDPELQEFADTSLKKDVVRFDLKGG 158
              ++G  IA L A  FEV K  S+   Y+V+S P+PL+P + +  D ++KKDV+ F+LKGG
Sbjct:    96 SYEGKPIAILKAPEFEVVKEKSMFLPYLVQSYPIPLNPTMMQAVDYAVKKDVITFELKGG 155

Query:   159 SRTRWRIGVLGSVKFWCRLDCQLKFHPSNGSYIPSRCSSTTK 200
             SRTRWR+G LGSVKF C L CQL+F PS+ SYIPS C+S  K
Sbjct:   156 SRTRWRVGPLGSVKFECNLSCQLRFRPSDHSYIPSPCTSAHK 197

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0009507 "chloroplast" evidence=ISM

TAIR|locus:2125157 AT4G01410 "AT4G01410" [Arabidopsis thaliana (taxid:3702)]

 Score = 154 (59.3 bits), Expect = 3.5e-11, P = 3.5e-11
 Identities = 43/162 (26%), Positives = 70/162 (43%)

Query:    42 YLVMHPRIPVMSVVGAHLDLFQYDEAGLLETQVTIVIRMRNGNAKAGASFSDTSVYLFF- 100
             +LV  P  P ++VVGA +    +    L+ T V   +  RN N +    +   S+Y+ + 
Sbjct:    63 WLVYRPHKPRLTVVGAAIYDLNFTAPPLISTSVQFSVLARNPNRRVSIHYDKLSMYVTYK 122

Query:   101 DGLKIAQLVADPFEVSKNSSVDFNYVVESRPVPLDPELQEFADTSLKKDVVRFDLKGGSR 160
             D +    L   P  +   S+V    V+    +P+ PE+           VV   +    R
Sbjct:   123 DQIITPPLPLPPLRLGHKSTVVIAPVMGGNGIPVSPEVANGLKNDEAYGVVLMRVVIFGR 182

Query:   161 TRWRIGVL--GSVKFWCRLDCQLKFHPSNGSYIPSRCSSTTK 200
              RW+ G +  G   F+ R D  L+F+PS+   +P    ST K
Sbjct:   183 LRWKAGAIKTGRYGFYARCDVWLRFNPSSNGQVPLLAPSTCK 224

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0005886 "plasma membrane" evidence=IDA

GO:0009506 "plasmodesma" evidence=IDA

TAIR|locus:2031840 AT1G13050 "AT1G13050" [Arabidopsis thaliana (taxid:3702)]

 Score = 131 (51.2 bits), Expect = 4.0e-08, P = 4.0e-08
 Identities = 38/157 (24%), Positives = 63/157 (40%)

Query:    42 YLVMHPRIPVMSVVGAHLDLFQYDEAGLLETQVTIVIRMRNGNAKAGASFSDTSVYLFFD 101
             YL   PR P   +  A L+    D   +L   + +V+   N + K+   FS     L+F 
Sbjct:   159 YLANRPRSPYFDISAATLNTANLDMGYVLNGDLAVVVNFTNPSKKSSVDFSYVMFELYFY 218

Query:   102 GLKIAQLVADPFEVSKNSSVDFNYVVESRPVPLDPELQEFADTSLKKDVVRFDLKGGSRT 161
                IA    +PF V K  S+  ++ + S  V +     +     L    V  +L+G    
Sbjct:   219 NTLIATEHIEPFIVPKGMSMFTSFHLVSSQVQIQMIQSQDLQLQLGTGPVLLNLRGTFHA 278

Query:   162 RWRIGVLGSVKFWCRLDCQLKFH-PSNGSYIPSRCSS 197
             R  +G L    +W    C +  + P  G+    RC++
Sbjct:   279 RSNLGSLMRYSYWLHTQCSISLNTPPAGTMRARRCNT 315

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=ISM

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0006312 "mitotic recombination" evidence=RCA

GO:0009410 "response to xenobiotic stimulus" evidence=RCA

GO:0009560 "embryo sac egg cell differentiation" evidence=RCA

GO:0009640 "photomorphogenesis" evidence=RCA

GO:0009793 "embryo development ending in seed dormancy" evidence=RCA

GO:0009845 "seed germination" evidence=RCA

GO:0009909 "regulation of flower development" evidence=RCA

GO:0009933 "meristem structural organization" evidence=RCA

GO:0010162 "seed dormancy process" evidence=RCA

GO:0010182 "sugar mediated signaling pathway" evidence=RCA

GO:0010228 "vegetative to reproductive phase transition of meristem" evidence=RCA

GO:0016567 "protein ubiquitination" evidence=RCA

GO:0019915 "lipid storage" evidence=RCA

GO:0048522 "positive regulation of cellular process" evidence=RCA

GO:0050826 "response to freezing" evidence=RCA

TAIR|locus:2131478 AT4G26490 "AT4G26490" [Arabidopsis thaliana (taxid:3702)]

 Score = 117 (46.2 bits), Expect = 1.7e-05, P = 1.7e-05
 Identities = 37/162 (22%), Positives = 72/162 (44%)

Query:    42 YLVMHPRIPVMSVVGAHLDLFQYDEAGLLETQVTIVIRMRNGNAKAGASFSDTSVYLFFD 101
             +L + PRIPV  +  A+L    +D        +++++   N N K    F    + LFF 
Sbjct:   111 FLAIRPRIPVFDIPNANLHTIYFDTPEFFNGDLSMLVNFTNPNKKIEVKFEKLRIELFFF 170

Query:   102 GLKIAQLVADPFEVSKNSS-VDFNYVVESRP-VPLDPELQEFADTSLKKDVVRFDLKGGS 159
                IA  V  PF   K+ + ++   ++ S   +P++  ++      L+ + + ++++G  
Sbjct:   171 NRLIAAQVVQPFLQKKHETRLEPIRLISSLVGLPVNHAVE--LRRQLENNKIEYEIRGTF 228

Query:   160 RTRWRIGVLGSVKFWCRLDCQLKFH-PSNGSYIPSRCSSTTK 200
             + +   G++    +     CQL+   P  G  I   C  TTK
Sbjct:   229 KVKAHFGMI-HYSYQLHGRCQLQMTGPPTGILISRNC--TTK 267

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2059274 AT2G27080 "AT2G27080" [Arabidopsis thaliana (taxid:3702)]

 Score = 115 (45.5 bits), Expect = 3.1e-05, P = 3.1e-05
 Identities = 41/162 (25%), Positives = 71/162 (43%)

Query:    42 YLVMHPRIPVMSVVGAHLDLFQYDEAGLLETQVTIVIRMRNGNAKAGASFS-DTSVYLFF 100
             YL+  P  P  S+ G  +     +    +     + +R RNGN K G  +  ++SV +++
Sbjct:    97 YLIYRPEAPKYSIEGFSVSGINLNSTSPISPSFNVTVRSRNGNGKIGVYYEKESSVDVYY 156

Query:   101 DGLKIAQLVADPF-EVSKNSSVDFNYVVESRPVPLDPELQEFADTSLKKDVVRFDLKGGS 159
             + + I+  V   F + +KN +V    V+    + L   +++     + K  V F LK  +
Sbjct:   157 NDVDISNGVMPVFYQPAKNVTV-VKLVLSGSKIQLTSGMRKEMRNEVSKKTVPFKLKIKA 215

Query:   160 RTRWRIGVLGSVKFWCRL---DCQLKFHPSNG-SYIPSR-CS 196
               + + G   SVK W  +   DC +        S I SR CS
Sbjct:   216 PVKIKFG---SVKTWTMIVNVDCDVTVDKLTAPSRIVSRKCS 254

GO:0003674 "molecular_function" evidence=ND

GO:0005886 "plasma membrane" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0009506 "plasmodesma" evidence=IDA

TAIR|locus:2039210 NHL12 "AT2G35960" [Arabidopsis thaliana (taxid:3702)]

 Score = 109 (43.4 bits), Expect = 0.00011, P = 0.00011
 Identities = 33/144 (22%), Positives = 60/144 (41%)

Query:    39 FTGYLVMHPRIPVMSVVGAHLDLFQYDEAGLLETQVTIVIRMRNGNAKAGASFSDTSVYL 98
             F  ++++ P  P   +  A +  F   +  LL +   I I  RN N++ G  +    VY 
Sbjct:    37 FLVWIILQPTKPRFILQDATVYAFNLSQPNLLTSNFQITIASRNRNSRIGIYYDRLHVYA 96

Query:    99 FFDGLKIAQLVADP--FEVSKNSSVDFNYVVESRPVPLDPELQEFADTSLKKDVVRFDLK 156
              +   +I    A P  ++  K  +V ++  V    VP+ P           +  V   ++
Sbjct:    97 TYRNQQITLRTAIPPTYQGHKEDNV-WSPFVYGNSVPIAPFNAVALGDEQNRGFVTLIIR 155

Query:   157 GGSRTRWRIGVLGSVKFWCRLDCQ 180
                R RW++G L + K+   + CQ
Sbjct:   156 ADGRVRWKVGTLITGKYHLHVRCQ 179

GO:0003674 "molecular_function" evidence=ND

GO:0005886 "plasma membrane" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0000023 "maltose metabolic process" evidence=RCA

GO:0019252 "starch biosynthetic process" evidence=RCA

TAIR|locus:504956450 AT5G22200 "AT5G22200" [Arabidopsis thaliana (taxid:3702)]

 Score = 102 (41.0 bits), Expect = 0.00093, P = 0.00093
 Identities = 28/143 (19%), Positives = 63/143 (44%)

Query:    39 FTGYLVMHPRIPVMSVVGAHLDLFQYDEAGLLETQVTIVIRMRNGNAKAGASFSDTSVYL 98
             F  + ++HP  P   +    ++ F   +   L + + + +  RN N K G  +    +Y+
Sbjct:    40 FLVWAILHPHGPRFVLQDVTINDFNVSQPNFLSSNLQVTVSSRNPNDKIGIFYDRLDIYV 99

Query:    99 FFDGLKI--AQLVADPFEVSKNSSVDFNYVVESRPVPLDPELQEFADTSLKKDVVRFDLK 156
              +   ++  A+L+   ++     +V   +++ S  VP+ P L    +  L   +V  ++K
Sbjct:   100 TYRNQEVTLARLLPSTYQGHLEVTVWSPFLIGSA-VPVAPYLSSALNEDLFAGLVLLNIK 158

Query:   157 GGSRTRWRIGVLGSVKFWCRLDC 179
                  RW++G   S  +   ++C
Sbjct:   159 IDGWVRWKVGSWVSGSYRLHVNC 181


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.323   0.139   0.429    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      200       177   0.00084  109 3  11 22  0.38    32
                                                     31  0.50    34


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  7
  No. of states in DFA:  593 (63 KB)
  Total size of DFA:  154 KB (2092 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  15.55u 0.09s 15.64t   Elapsed:  00:00:01
  Total cpu time:  15.55u 0.09s 15.64t   Elapsed:  00:00:01
  Start:  Fri May 10 02:08:05 2013   End:  Fri May 10 02:08:06 2013

GO:0003674 "molecular_function" evidence=ND

GO:0005739 "mitochondrion" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0009505 "plant-type cell wall" evidence=IDA

GO:0009506 "plasmodesma" evidence=IDA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	200
PLN03160	219	uncharacterized protein; Provisional	100.0
PF03168	101	LEA_2: Late embryogenesis abundant protein; InterP	99.51
smart00769	100	WHy Water Stress and Hypersensitive response.	98.59
PF07092	238	DUF1356: Protein of unknown function (DUF1356); In	98.44
PF12751	387	Vac7: Vacuolar segregation subunit 7; InterPro: IP	97.75
COG5608	161	LEA14-like dessication related protein [Defense me	97.74
PLN03160	219	uncharacterized protein; Provisional	93.76
PF06072	60	Herpes_US9: Alphaherpesvirus tegument protein US9;	81.4
TIGR02588	122	conserved hypothetical protein TIGR02588. The func	80.95

>PLN03160 uncharacterized protein; Provisional

Probab=100.00  E-value=1.4e-37  Score=250.52  Aligned_cols=184  Identities=13%  Similarity=0.195  Sum_probs=152.5

Q ss_pred             CCccchhhhHHHHHHHHHHHHHHHHHHheeeeEEEecCCcEEEEEeEEEeeEEeCC----CceEeEEEEEEEEEecCCCe
Q 029005           11 RITHPLIWLIAIICTILAIAVIIAGIVVFTGYLVMHPRIPVMSVVGAHLDLFQYDE----AGLLETQVTIVIRMRNGNAK   86 (200)
Q Consensus        11 ~r~~~~~~~~~~~~~~l~~lll~~gi~~~i~~l~~rP~~P~~~v~~~~v~~~~~~~----~~~l~~~~~~~l~~~NPN~~   86 (200)
                      +|+++|++|++|+++++   ++++++++.++|++||||+|+|+|+++++++|++++    +..+|++++++++++|||. 
T Consensus        31 ~~r~~~~~c~~~~~a~~---l~l~~v~~~l~~~vfrPk~P~~~v~~v~l~~~~~~~~~~~~~~~n~tl~~~v~v~NPN~-  106 (219)
T PLN03160         31 TRRRNCIKCCGCITATL---LILATTILVLVFTVFRVKDPVIKMNGVTVTKLELINNTTLRPGTNITLIADVSVKNPNV-  106 (219)
T ss_pred             cccccceEEHHHHHHHH---HHHHHHHHheeeEEEEccCCeEEEEEEEEeeeeeccCCCCceeEEEEEEEEEEEECCCc-
Confidence            34455555555555432   333566677788999999999999999999999864    3468888999999999998 


Q ss_pred             EEEEEeceEEEEEECCEEeecccccCeeecCCceeEEeeEEEecceecCHHHHHHHHccccCCeEEEEEEEEEEEEEEEe
Q 029005           87 AGASFSDTSVYLFFDGLKIAQLVADPFEVSKNSSVDFNYVVESRPVPLDPELQEFADTSLKKDVVRFDLKGGSRTRWRIG  166 (200)
Q Consensus        87 ~~i~y~~~~v~v~Y~~~~lg~~~~p~f~q~~~~t~~~~~~~~~~~v~l~~~~~~~l~~d~~~g~v~~~v~~~~~vr~~vg  166 (200)
                      ++++|+++++.++|+|+.+|.+.+|+|+|++++|+.+++.+......+-.  ..+|.+|..+|.++|+++++.++++++|
T Consensus       107 ~~~~Y~~~~~~v~Y~g~~vG~a~~p~g~~~ar~T~~l~~tv~~~~~~~~~--~~~L~~D~~~G~v~l~~~~~v~gkVkv~  184 (219)
T PLN03160        107 ASFKYSNTTTTIYYGGTVVGEARTPPGKAKARRTMRMNVTVDIIPDKILS--VPGLLTDISSGLLNMNSYTRIGGKVKIL  184 (219)
T ss_pred             eeEEEcCeEEEEEECCEEEEEEEcCCcccCCCCeEEEEEEEEEEeceecc--chhHHHHhhCCeEEEEEEEEEEEEEEEE
Confidence            89999999999999999999999999999999999999876533222211  2358889999999999999999999999


Q ss_pred             EEEEeeEEEEEEeEEEEeCCCCeeecCCCccCCC
Q 029005          167 VLGSVKFWCRLDCQLKFHPSNGSYIPSRCSSTTK  200 (200)
Q Consensus       167 ~~~~~~~~~~v~C~l~v~p~~g~~~~~~C~~k~~  200 (200)
                      ++.+++++.+++|++.++..+.++.+++|+.+++
T Consensus       185 ~i~k~~v~~~v~C~v~V~~~~~~i~~~~C~~~~~  218 (219)
T PLN03160        185 KIIKKHVVVKMNCTMTVNITSQAIQGQKCKRHVD  218 (219)
T ss_pred             EEEEEEEEEEEEeEEEEECCCCEEeccEeccccc
Confidence            9999999999999999997677788889999875

>PF03168 LEA_2: Late embryogenesis abundant protein; InterPro: IPR004864 Different types of LEA proteins are expressed at different stages of late embryogenesis in higher plant seed embryos and under conditions of dehydration stress [, ]

Probab=99.51  E-value=8.4e-14  Score=98.43  Aligned_cols=97  Identities=22%  Similarity=0.388  Sum_probs=69.9

Q ss_pred             EEEEecCCCeEEEEEeceEEEEEECCEEee-cccccCeeecCCceeEEeeEEEecceecCHHHHHHHHccccCCeEEEEE
Q 029005           77 VIRMRNGNAKAGASFSDTSVYLFFDGLKIA-QLVADPFEVSKNSSVDFNYVVESRPVPLDPELQEFADTSLKKDVVRFDL  155 (200)
Q Consensus        77 ~l~~~NPN~~~~i~y~~~~v~v~Y~~~~lg-~~~~p~f~q~~~~t~~~~~~~~~~~v~l~~~~~~~l~~d~~~g~v~~~v  155 (200)
                      +++++|||. ++++|++++++++|+|+.+| ....++|.|++++++.+.+.+..+...+    .+.+.++. +|..++++
T Consensus         1 ~l~v~NPN~-~~i~~~~~~~~v~~~g~~v~~~~~~~~~~i~~~~~~~v~~~v~~~~~~l----~~~l~~~~-~~~~~~~v   74 (101)
T PF03168_consen    1 TLSVRNPNS-FGIRYDSIEYDVYYNGQRVGTGGSLPPFTIPARSSTTVPVPVSVDYSDL----PRLLKDLL-AGRVPFDV   74 (101)
T ss_dssp             EEEEEESSS-S-EEEEEEEEEEEESSSEEEEEEECE-EEESSSCEEEEEEEEEEEHHHH----HHHHHHHH-HTTSCEEE
T ss_pred             CEEEECCCc-eeEEEeCEEEEEEECCEEEECccccCCeEECCCCcEEEEEEEEEcHHHH----HHHHHhhh-ccccceEE
Confidence            578999999 99999999999999999999 6678999999999999988666543222    45566666 55666667


Q ss_pred             EEEEEEEEEE-eE--EEEeeEEEEEEe
Q 029005          156 KGGSRTRWRI-GV--LGSVKFWCRLDC  179 (200)
Q Consensus       156 ~~~~~vr~~v-g~--~~~~~~~~~v~C  179 (200)
                      .+++++++++ +.  +.+.+++++.+|
T Consensus        75 ~~~~~g~~~v~~~~~~~~~~v~~~~~~  101 (101)
T PF03168_consen   75 TYRIRGTFKVLGTPIFGSVRVPVSCEC  101 (101)
T ss_dssp             EEEEEEEEE-EE-TTTSCEEEEEEEEE
T ss_pred             EEEEEEEEEEcccceeeeEEEeEEeEC
Confidence            7777777773 43  334444554444

The function of these proteins is unknown. ; PDB: 3BUT_A 1XO8_A 1YYC_A.

>smart00769 WHy Water Stress and Hypersensitive response

Probab=98.59  E-value=8.6e-07  Score=62.91  Aligned_cols=62  Identities=15%  Similarity=0.203  Sum_probs=55.3

Q ss_pred             CceEeEEEEEEEEEecCCCeEEEEEeceEEEEEECCEEeeccccc-CeeecCCceeEEeeEEEe
Q 029005           67 AGLLETQVTIVIRMRNGNAKAGASFSDTSVYLFFDGLKIAQLVAD-PFEVSKNSSVDFNYVVES  129 (200)
Q Consensus        67 ~~~l~~~~~~~l~~~NPN~~~~i~y~~~~v~v~Y~~~~lg~~~~p-~f~q~~~~t~~~~~~~~~  129 (200)
                      .+..+.++.+++.+.|||. +.+.|+.++..++|+|..+|++..+ ++..++++++.+.+.+..
T Consensus        10 ~~~~~~~~~l~l~v~NPN~-~~l~~~~~~y~l~~~g~~v~~g~~~~~~~ipa~~~~~v~v~~~~   72 (100)
T smart00769       10 VSGLEIEIVLKVKVQNPNP-FPIPVNGLSYDLYLNGVELGSGEIPDSGTLPGNGRTVLDVPVTV   72 (100)
T ss_pred             ccceEEEEEEEEEEECCCC-CccccccEEEEEEECCEEEEEEEcCCCcEECCCCcEEEEEEEEe
Confidence            3467789999999999997 8999999999999999999999985 799999999998876654

>PF07092 DUF1356: Protein of unknown function (DUF1356); InterPro: IPR009790 This family consists of several hypothetical mammalian proteins of around 250 residues in length

Probab=98.44  E-value=1.9e-05  Score=63.92  Aligned_cols=111  Identities=20%  Similarity=0.391  Sum_probs=73.1

Q ss_pred             CCCCCCCCccchhhhHHHHHHHHHHHHHHHHHHheeeeEEEecCCcEEEEEeEEEeeEEeCC-CceEeEEEEEEEEEecC
Q 029005            5 FFPPRRRITHPLIWLIAIICTILAIAVIIAGIVVFTGYLVMHPRIPVMSVVGAHLDLFQYDE-AGLLETQVTIVIRMRNG   83 (200)
Q Consensus         5 ~~~p~~~r~~~~~~~~~~~~~~l~~lll~~gi~~~i~~l~~rP~~P~~~v~~~~v~~~~~~~-~~~l~~~~~~~l~~~NP   83 (200)
                      |+.||  |++....+..++|.      ++.|++++  +  +-||.-.++-.++......++. .+.+..++.-.+.++||
T Consensus        68 RLKPr--RTklyV~~sV~~CL------l~~~L~iF--F--LfPRsV~v~~~gv~s~~V~f~~~~~~v~l~itn~lNIsN~  135 (238)
T PF07092_consen   68 RLKPR--RTKLYVFLSVLLCL------LLSGLVIF--F--LFPRSVTVSPVGVKSVTVSFNPDKSTVQLNITNTLNISNP  135 (238)
T ss_pred             ccCCc--eeEEEeeHHHHHHH------HHHHheEE--E--EeCcEEEEecCcEEEEEEEEeCCCCEEEEEEEEEEEccCC
Confidence            66777  77776554444442      22233332  2  3377655554444433333332 35688999999999999


Q ss_pred             CCeEEEEEeceEEEEEECCEEeecccccC-eeecCCceeEEeeEEE
Q 029005           84 NAKAGASFSDTSVYLFFDGLKIAQLVADP-FEVSKNSSVDFNYVVE  128 (200)
Q Consensus        84 N~~~~i~y~~~~v~v~Y~~~~lg~~~~p~-f~q~~~~t~~~~~~~~  128 (200)
                      |. ..+.-.++.+++.|....+|.+.... ...++++.+.+...+.
T Consensus       136 NF-y~V~Vt~~s~qv~~~~~VVG~~~~~~~~~I~Prs~~q~~~tV~  180 (238)
T PF07092_consen  136 NF-YPVTVTNLSIQVLYMKTVVGKGKNSNITVIGPRSSKQVNYTVK  180 (238)
T ss_pred             CE-EEEEEEeEEEEEEEEEeEEeeeEecceEEecccCCceEEEEee
Confidence            96 89999999999999999999987643 3557777766665443

The function of this family is unknown.

>PF12751 Vac7: Vacuolar segregation subunit 7; InterPro: IPR024260 Vac7 is localised at the vacuole membrane, a location which is consistent with its involvement in vacuole morphology and inheritance []

Probab=97.75  E-value=0.00021  Score=61.52  Aligned_cols=89  Identities=12%  Similarity=0.075  Sum_probs=57.1

Q ss_pred             CCccchhhhHHHHHHHHHHHHHHHHHHheeeeEEEecCCcEEEEEeEEEeeEEeCCCceEeEEEEEEEEEecCCCeEEEE
Q 029005           11 RITHPLIWLIAIICTILAIAVIIAGIVVFTGYLVMHPRIPVMSVVGAHLDLFQYDEAGLLETQVTIVIRMRNGNAKAGAS   90 (200)
Q Consensus        11 ~r~~~~~~~~~~~~~~l~~lll~~gi~~~i~~l~~rP~~P~~~v~~~~v~~~~~~~~~~l~~~~~~~l~~~NPN~~~~i~   90 (200)
                      |++++|.++.+|+.+.+++||++.|++.|++.    -.+|=-.|+-..+++.-.   +.-..-|++++.+.|||. +.|.
T Consensus       294 r~r~~~~r~~~c~~~~i~~lL~ig~~~gFv~A----ttKpL~~v~v~~I~NVla---S~qELmfdl~V~A~NPn~-~~V~  365 (387)
T PF12751_consen  294 RQRSWFSRFASCIYLSILLLLVIGFAIGFVFA----TTKPLTDVQVVSIQNVLA---SEQELMFDLTVEAFNPNW-FTVT  365 (387)
T ss_pred             ccccHHhhhhHHHHHHHHHHHHHHHHHHhhhh----cCcccccceEEEeeeeee---ccceEEEeeEEEEECCCe-EEEE
Confidence            44566666666665555555555555555432    234433444444444322   344567899999999997 8999


Q ss_pred             EeceEEEEEECCEEeec
Q 029005           91 FSDTSVYLFFDGLKIAQ  107 (200)
Q Consensus        91 y~~~~v~v~Y~~~~lg~  107 (200)
                      .++.+++++-+..-+|.
T Consensus       366 I~d~dldIFAKS~yvg~  382 (387)
T PF12751_consen  366 IDDMDLDIFAKSRYVGT  382 (387)
T ss_pred             eccceeeeEecCCccCc
Confidence            99999999987665554

Vac7 has been shown to function as an upstream regulator of the Fab1 lipid kinase pathway []. The Fab1 lipid pathway is important for correct regulation of membrane trafficking events.

>COG5608 LEA14-like dessication related protein [Defense mechanisms]

Probab=97.74  E-value=0.0016  Score=49.18  Aligned_cols=89  Identities=12%  Similarity=0.100  Sum_probs=65.3

Q ss_pred             CCcEEEEEeEEEeeEEeCCCceEeEEEEEEEEEecCCCeEEEEEeceEEEEEECCEEeeccc-ccCeeecCCceeEEeeE
Q 029005           48 RIPVMSVVGAHLDLFQYDEAGLLETQVTIVIRMRNGNAKAGASFSDTSVYLFFDGLKIAQLV-ADPFEVSKNSSVDFNYV  126 (200)
Q Consensus        48 ~~P~~~v~~~~v~~~~~~~~~~l~~~~~~~l~~~NPN~~~~i~y~~~~v~v~Y~~~~lg~~~-~p~f~q~~~~t~~~~~~  126 (200)
                      ++|.+.--.+..-...-     ....+-.++.++|||. +.+-....+..++-+|..+|.+. ..++..++++..++++.
T Consensus        31 ~~p~ve~~ka~wGkvt~-----s~~EiV~t~KiyNPN~-fPipVtgl~y~vymN~Iki~eG~~~k~~~v~p~S~~tvdv~  104 (161)
T COG5608          31 KKPGVESMKAKWGKVTN-----SETEIVGTLKIYNPNP-FPIPVTGLQYAVYMNDIKIGEGEILKGTTVPPNSRETVDVP  104 (161)
T ss_pred             CCCCceEEEEEEEEEec-----cceEEEEEEEecCCCC-cceeeeceEEEEEEcceEeeccccccceEECCCCeEEEEEE
Confidence            56766655555554332     2357788899999998 89999999999999999999997 57799999999999887


Q ss_pred             EEecceecCHHHHHHH
Q 029005          127 VESRPVPLDPELQEFA  142 (200)
Q Consensus       127 ~~~~~v~l~~~~~~~l  142 (200)
                      +.-+.-.+.......+
T Consensus       105 l~~d~~~~ke~w~~hi  120 (161)
T COG5608         105 LRLDNSKIKEWWVTHI  120 (161)
T ss_pred             EEEehHHHHHHHHHHh
Confidence            7654333333333333

>PLN03160 uncharacterized protein; Provisional

Probab=93.76  E-value=1.8  Score=34.98  Aligned_cols=102  Identities=17%  Similarity=0.102  Sum_probs=51.4

Q ss_pred             CCCCccchhhhHHHHHHHHHHHHHHHHHHheeeeEEEecC--CcEEEEEeEEEee-------EEeCC--C-ceEeEEEEE
Q 029005            9 RRRITHPLIWLIAIICTILAIAVIIAGIVVFTGYLVMHPR--IPVMSVVGAHLDL-------FQYDE--A-GLLETQVTI   76 (200)
Q Consensus         9 ~~~r~~~~~~~~~~~~~~l~~lll~~gi~~~i~~l~~rP~--~P~~~v~~~~v~~-------~~~~~--~-~~l~~~~~~   76 (200)
                      |+++.+||.|+++++.+ ++++   +++++++++=-=.|+  .-.++++++.+..       +|++-  + +.-|.|. +
T Consensus        33 r~~~~~c~~~~~a~~l~-l~~v---~~~l~~~vfrPk~P~~~v~~v~l~~~~~~~~~~~~~~~n~tl~~~v~v~NPN~-~  107 (219)
T PLN03160         33 RRNCIKCCGCITATLLI-LATT---ILVLVFTVFRVKDPVIKMNGVTVTKLELINNTTLRPGTNITLIADVSVKNPNV-A  107 (219)
T ss_pred             cccceEEHHHHHHHHHH-HHHH---HHheeeEEEEccCCeEEEEEEEEeeeeeccCCCCceeEEEEEEEEEEEECCCc-e
Confidence            44555566666666554 4322   233344444445563  3455566655432       23210  0 1224454 4


Q ss_pred             EEEEecCCCeEEEEEeceEEEEEECCEEeecccccCeeecCCcee
Q 029005           77 VIRMRNGNAKAGASFSDTSVYLFFDGLKIAQLVADPFEVSKNSSV  121 (200)
Q Consensus        77 ~l~~~NPN~~~~i~y~~~~v~v~Y~~~~lg~~~~p~f~q~~~~t~  121 (200)
                      .+...  |..+.++|+...+.-    ..+..+..++..+..-+.+
T Consensus       108 ~~~Y~--~~~~~v~Y~g~~vG~----a~~p~g~~~ar~T~~l~~t  146 (219)
T PLN03160        108 SFKYS--NTTTTIYYGGTVVGE----ARTPPGKAKARRTMRMNVT  146 (219)
T ss_pred             eEEEc--CeEEEEEECCEEEEE----EEcCCcccCCCCeEEEEEE
Confidence            45554  345889998855543    3355556666666555544

>PF06072 Herpes_US9: Alphaherpesvirus tegument protein US9; InterPro: IPR009278 This family consists of several US9 and related proteins from the Alphaherpesviruses

Probab=81.40  E-value=0.79  Score=29.07  Aligned_cols=25  Identities=20%  Similarity=0.502  Sum_probs=11.3

Q ss_pred             hHHHHHHHHHHHHHHHHHHheeeeE
Q 029005           19 LIAIICTILAIAVIIAGIVVFTGYL   43 (200)
Q Consensus        19 ~~~~~~~~l~~lll~~gi~~~i~~l   43 (200)
                      +.++.+.++++-++..++-+++.|+
T Consensus        35 ~v~~v~~~~~~c~~S~~lG~~~~~~   59 (60)
T PF06072_consen   35 AVAIVFAVVALCVLSGGLGALVAWH   59 (60)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhhcc
Confidence            3444444434444444444555553

The function of the US9 protein is unknown although in Bovine herpesvirus 5 Us9 is essential for the anterograde spread of the virus from the olfactory mucosa to the bulb [].; GO: 0019033 viral tegument

>TIGR02588 conserved hypothetical protein TIGR02588

Probab=80.95  E-value=3.3  Score=30.36  Aligned_cols=49  Identities=16%  Similarity=0.243  Sum_probs=30.6

Q ss_pred             HHHHHHHheeeeEEE--ecCCcEEEEEeEEEeeEEeCCCceEeEEEEEEEEEecCCCe
Q 029005           31 VIIAGIVVFTGYLVM--HPRIPVMSVVGAHLDLFQYDEAGLLETQVTIVIRMRNGNAK   86 (200)
Q Consensus        31 ll~~gi~~~i~~l~~--rP~~P~~~v~~~~v~~~~~~~~~~l~~~~~~~l~~~NPN~~   86 (200)
                      +++++++.+++|..+  +++.|.+.+......+-       ....+-+-++++|-..+
T Consensus        13 ~ill~viglv~y~~l~~~~~pp~l~v~~~~~~r~-------~~gqyyVpF~V~N~gg~   63 (122)
T TIGR02588        13 LILAAMFGLVAYDWLRYSNKAAVLEVAPAEVERM-------QTGQYYVPFAIHNLGGT   63 (122)
T ss_pred             HHHHHHHHHHHHHhhccCCCCCeEEEeehheeEE-------eCCEEEEEEEEEeCCCc
Confidence            445566666666544  56789998877666542       12345666778886653

The function of this protein is unknown. It is always found as part of a two-gene operon with TIGR02587, a protein that appears to span the membrane seven times. It is found in Nostoc sp. PCC 7120, Agrobacterium tumefaciens, Sinorhizobium meliloti, and Gloeobacter violaceus, so far, all of which are bacterial.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	200
1yyc_A	174	LEA protein, putative late embryogenesis abundant	98.45
1xo8_A	151	AT1G01470; structural genomics, protein structure	98.22
3but_A	136	Uncharacterized protein AF_0446; lipid binding pro	98.12

>1yyc_A LEA protein, putative late embryogenesis abundant protein; structural genomics, protein structure initiative, CESG; NMR {Arabidopsis thaliana}

Probab=98.45  E-value=2.3e-06  Score=65.67  Aligned_cols=103  Identities=12%  Similarity=0.036  Sum_probs=80.1

Q ss_pred             CCcEEEEEeEEEeeEEeCCCceEeEEEEEEEEEecCCCeEEEEEeceEEEEEECCEEeeccccc-CeeecCCceeEEeeE
Q 029005           48 RIPVMSVVGAHLDLFQYDEAGLLETQVTIVIRMRNGNAKAGASFSDTSVYLFFDGLKIAQLVAD-PFEVSKNSSVDFNYV  126 (200)
Q Consensus        48 ~~P~~~v~~~~v~~~~~~~~~~l~~~~~~~l~~~NPN~~~~i~y~~~~v~v~Y~~~~lg~~~~p-~f~q~~~~t~~~~~~  126 (200)
                      +.|.+++.++++.+++..     ..++.+.++++|||. ..+.+..++.++.-+|..++++..+ ++..++++++.+.+.
T Consensus        43 ~~PeV~v~~v~~~~~~l~-----~~~~~l~LrV~NPN~-~pLpi~gi~Y~L~vnG~~lasG~s~~~~tIpa~g~~~v~Vp  116 (174)
T 1yyc_A           43 PTPEATVDDVDFKGVTRD-----GVDYHAKVSVKNPYS-QSIPICQISYILKSATRTIASGTIPDPGSLVGSGTTVLDVP  116 (174)
T ss_dssp             CCCEEEEEEEEEEEECSS-----SEEEEEEEEEEECSS-SCCBCCSEEEEEEESSSCEEEEEESCCCBCCSSEEEEEEEE
T ss_pred             CCCEEEEEEeEEeccccc-----eEEEEEEEEEECCCC-CCccccceEEEEEECCEEEEEEecCCCceECCCCcEEEEEE
Confidence            689999999999887653     378999999999998 8999999999999999999999875 688899999999876


Q ss_pred             EEecceecCHHHHHHHHcccc-CCeEEEEEEEEEEE
Q 029005          127 VESRPVPLDPELQEFADTSLK-KDVVRFDLKGGSRT  161 (200)
Q Consensus       127 ~~~~~v~l~~~~~~~l~~d~~-~g~v~~~v~~~~~v  161 (200)
                      +...     ......+.+++. .+.++.+++++..+
T Consensus       117 v~v~-----~~~l~~~~~~l~~~~~i~Y~L~g~L~i  147 (174)
T 1yyc_A          117 VKVA-----YSIAVSLMKDMCTDWDIDYQLDIGLTF  147 (174)
T ss_dssp             EEES-----HHHHHHTCCCCCSSEEECEEEEEEEEE
T ss_pred             EEEE-----HHHHHHHHHhcCCCCccceEEEEEEEe
Confidence            6532     222233445553 34677777765443

>1xo8_A AT1G01470; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG, unknown function; NMR {Arabidopsis thaliana} SCOP: b.1.25.1

Probab=98.22  E-value=1.3e-06  Score=65.60  Aligned_cols=103  Identities=12%  Similarity=0.043  Sum_probs=77.1

Q ss_pred             CCcEEEEEeEEEeeEEeCCCceEeEEEEEEEEEecCCCeEEEEEeceEEEEEECCEEeeccccc-CeeecCCceeEEeeE
Q 029005           48 RIPVMSVVGAHLDLFQYDEAGLLETQVTIVIRMRNGNAKAGASFSDTSVYLFFDGLKIAQLVAD-PFEVSKNSSVDFNYV  126 (200)
Q Consensus        48 ~~P~~~v~~~~v~~~~~~~~~~l~~~~~~~l~~~NPN~~~~i~y~~~~v~v~Y~~~~lg~~~~p-~f~q~~~~t~~~~~~  126 (200)
                      +.|.+++.++++.+++.     ...++.+.++++|||. ..+.+..++.++.-+|..++++..+ ++..++++++.+.+.
T Consensus        20 ~~P~v~v~~v~~~~~~~-----~~~~~~~~l~V~NPN~-~~lpi~gi~y~l~vng~~lasG~~~~~~~ipa~g~~~v~vp   93 (151)
T 1xo8_A           20 PKPEGSVTDVDLKDVNR-----DSVEYLAKVSVTNPYS-HSIPICEISFTFHSAGREIGKGKIPDPGSLKAKDMTALDIP   93 (151)
T ss_dssp             CSCCCBCSEEEECCCTT-----TEECEEEEEEEECSSS-SCCCCEEEEEEEESSSSCEEEEEEEECCCCSSSSEEEEEEC
T ss_pred             CCCEEEEEEeEEeccCc-----ceeEEEEEEEEECCCC-CCcccccEEEEEEECCEEEEEEecCCCcEECCCCcEEEEEE
Confidence            67889999988877543     3468999999999998 8999999999999999999999875 688899999988875


Q ss_pred             EEecceecCHHHHHHHHccc-cCCeEEEEEEEEEEE
Q 029005          127 VESRPVPLDPELQEFADTSL-KKDVVRFDLKGGSRT  161 (200)
Q Consensus       127 ~~~~~v~l~~~~~~~l~~d~-~~g~v~~~v~~~~~v  161 (200)
                      +...     -.....+..++ ..+.++.+++++..+
T Consensus        94 v~v~-----~~~l~~~~~~l~~~~~i~Y~l~g~l~i  124 (151)
T 1xo8_A           94 VVVP-----YSILFNLARDVGVDWDIDYELQIGLTI  124 (151)
T ss_dssp             CCEE-----HHHHHHHHHHHHHHSEEEEEEEEEEEE
T ss_pred             EEEE-----HHHHHHHHHhcccCCcccEEEEEEEEE
Confidence            5422     12222233333 345788887766544

>3but_A Uncharacterized protein AF_0446; lipid binding protein, beta barrel, protein structure initia PSI-2; 1.91A {Archaeoglobus fulgidus dsm 4304}

Probab=98.12  E-value=5.5e-05  Score=55.68  Aligned_cols=73  Identities=15%  Similarity=0.202  Sum_probs=60.0

Q ss_pred             eEEEEEEEEEecCCCeEEEEEeceEEEEEECCEEeeccc-ccCeeecCCceeEEeeEEEecceecCHHHHHHHHc
Q 029005           71 ETQVTIVIRMRNGNAKAGASFSDTSVYLFFDGLKIAQLV-ADPFEVSKNSSVDFNYVVESRPVPLDPELQEFADT  144 (200)
Q Consensus        71 ~~~~~~~l~~~NPN~~~~i~y~~~~v~v~Y~~~~lg~~~-~p~f~q~~~~t~~~~~~~~~~~v~l~~~~~~~l~~  144 (200)
                      ...+.+.+.+.|||. +.+.++.+..+++..|..+|++. ...+..++.+++.+.+.+..+.-.+.....+-+++
T Consensus        17 ~t~~~~~l~V~NPN~-~~l~i~gl~y~v~lng~~la~G~s~~~~~I~~~g~~~v~v~~~i~~~~l~~~~~~hi~n   90 (136)
T 3but_A           17 QTEIVALAKVRNEDV-VPIVVSGYHYTIEMNGVKVADGYENSPVTVKPASATTLKFSLRLNNSFLREWWVTHIAN   90 (136)
T ss_dssp             EEEEEEEEEEECCSS-SCEEEEEEEEEEEETTEEEEEEEECCCEEECTTCEEEEEEEEEEEHHHHTTHHHHHHHT
T ss_pred             EEEEEEEEEEeCCCC-cceeeeceEEEEEECCEEEEeeeecCceEECCCCcEEEEEEEEEchHHhHHHHHHHhhc
Confidence            467899999999997 89999999999999999999997 67899999998888887776655555555555543

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	200
d1xo8a_	151	Putative dessication related protein LEA14 {Thale	98.31

>d1xo8a_ b.1.25.1 (A:) Putative dessication related protein LEA14 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: LEA14-like
family: LEA14-like
domain: Putative dessication related protein LEA14
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=98.31  E-value=2.1e-07  Score=68.13  Aligned_cols=104  Identities=13%  Similarity=0.050  Sum_probs=76.7

Q ss_pred             cCCcEEEEEeEEEeeEEeCCCceEeEEEEEEEEEecCCCeEEEEEeceEEEEEECCEEeeccccc-CeeecCCceeEEee
Q 029005           47 PRIPVMSVVGAHLDLFQYDEAGLLETQVTIVIRMRNGNAKAGASFSDTSVYLFFDGLKIAQLVAD-PFEVSKNSSVDFNY  125 (200)
Q Consensus        47 P~~P~~~v~~~~v~~~~~~~~~~l~~~~~~~l~~~NPN~~~~i~y~~~~v~v~Y~~~~lg~~~~p-~f~q~~~~t~~~~~  125 (200)
                      =+.|.+++.++++.+++.     ...++.+.+++.|||. +++.....+.+++.+|..++++..+ ++..++++++.+.+
T Consensus        19 ~~kPev~l~~v~i~~v~~-----~~~~l~~~l~V~NPN~-~~l~i~~l~y~l~~~g~~ia~G~~~~~~~ipa~~~~~v~v   92 (151)
T d1xo8a_          19 IPKPEGSVTDVDLKDVNR-----DSVEYLAKVSVTNPYS-HSIPICEISFTFHSAGREIGKGKIPDPGSLKAKDMTALDI   92 (151)
T ss_dssp             CCSCCCBCSEEEECCCTT-----TEECEEEEEEEECSSS-SCCCCEEEEEEEESSSSCEEEEEEEECCCCSSSSEEEEEE
T ss_pred             CCCCeEEEEEEEeeeccc-----ceEEEEEEEEEECCCC-CceeeeeEEEEEEECCEEEEeEecCCCcEEcCCCcEEEEE
Confidence            357999999999887654     3468999999999998 8999999999999999999999765 68889999999887


Q ss_pred             EEEecceecCHHHHHHHHccc-cCCeEEEEEEEEEEE
Q 029005          126 VVESRPVPLDPELQEFADTSL-KKDVVRFDLKGGSRT  161 (200)
Q Consensus       126 ~~~~~~v~l~~~~~~~l~~d~-~~g~v~~~v~~~~~v  161 (200)
                      .+...   . .+.. .+.+++ ..+.++.+++++..+
T Consensus        93 pv~v~---~-~~l~-~~~~~i~~~~~i~Y~l~g~l~~  124 (151)
T d1xo8a_          93 PVVVP---Y-SILF-NLARDVGVDWDIDYELQIGLTI  124 (151)
T ss_dssp             CCCEE---H-HHHH-HHHHHHHHHSEEEEEEEEEEEE
T ss_pred             EEEEE---H-HHHH-HHHHhhccCCCccEEEEEEEEE
Confidence            55422   1 1222 233333 345577666655444