Citrus Sinensis ID: 029027

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200
MTDTKLAISETYQQTDVDFLESERDTYRDDGSTASTAILVGNHLYVANVGDSRTVISKAGKAIPLSEDHKPNRCDERKRIENAGGVVMWAGTWRVGGVLAMSRAFGNRMLKQFVVAEPEIQDLEVDEGFELLVLASDGLWDVVPNEDAVALARTGEEPEIAARKLTETAFTRGSADNITCIVVRFHHVNEDPAEPEVEQE
cccHHHHHHHHHHHHHHHHHHHHcccccccccEEEEEEEEccEEEEEEccccEEEEEEccEEEEcccccccccHHHHHHHHHcccEEEEcccEEEccEEEEHHccccccccccEEccccEEEEEccccccEEEEEccccccccccHHHHHHHHccccHHHHHHHHHHHHHHcccccccEEEEEEcccccccccccccccc
cccHHHHHHHHHHHHHHHHHHHHcccccccccEEEEEEEEccEEEEEEccccEEEEEcccEEEEcccccccccHHHHHHHHHcccEEEEccccEEccEEEEHHHHccHHccccccccccEEEEEcccccEEEEEEccccHccccHHHHHHHHHccccHHHHHHHHHHHHHHccccccEEEEEEEEccccccccccccccc
MTDTKLAISETYQQTDVDFLESerdtyrddgstasTAILVGNHLYVANVGDSRTVISkagkaiplsedhkpnrcderKRIENAGGVVMWAGTWRVGGVLAMSRAFGNRMLKQFVvaepeiqdlevdEGFELLVLASdglwdvvpneDAVALArtgeepeiAARKLTETaftrgsadniTCIVVRFhhvnedpaepeveqe
mtdtklaisetyqqtdvdfLESERDTYRDDGSTASTAILVGNHLYVANVGDSRTVISKAgkaiplsedhkpnrcdERKRienaggvvmwaGTWRVGGVLAMSRAFGNRMLKQFVVAEPEIQDLEVDEGFELLVLASDGLWDVVPNEDAVALartgeepeiaarkltetaftrgsadNITCIVVRFHHvnedpaepeveqe
MTDTKLAISETYQQTDVDFLESERDTYRDDGSTASTAILVGNHLYVANVGDSRTVISKAGKAIPLSEDHKPNRCDERKRIENAGGVVMWAGTWRVGGVLAMSRAFGNRMLKQFVVAEPEIQDLEVDEGFELLVLASDGLWDVVPNEDAVALARTGEEPEIAARKLTETAFTRGSADNITCIVVRFHHVNEDPAEPEVEQE
**********************************STAILVGNHLYVANVGDSRTVISK*********************IENAGGVVMWAGTWRVGGVLAMSRAFGNRMLKQFVVAEPEIQDLEVDEGFELLVLASDGLWDVVPNEDAVALARTGE*PEIAARKLTETAFTRGSADNITCIVVRFHHV************
*TDTKLAISETYQQTDVDFLESE****RDDGSTASTAILVGNHLYVANVGDSRTVISKAGKAIPLSEDHKPNRCDERKRIENAGGVVMWAGTWRVGGVLAMSRAFGNRMLKQFVVAEPEIQDLEVDEGFELLVLASDGLWDVVPNEDAVALARTGEEPEIAARKLTETAFTRGSADNITCIVVR****************
MTDTKLAISETYQQTDVDFLESERDTYRDDGSTASTAILVGNHLYVANVGDSRTVISKAGKAIPLSEDHKPNRCDERKRIENAGGVVMWAGTWRVGGVLAMSRAFGNRMLKQFVVAEPEIQDLEVDEGFELLVLASDGLWDVVPNEDAVALARTGEEPEIAARKLTETAFTRGSADNITCIVVRFHHVNE**********
MTDTKLAISETYQQTDVDFLESERDTYRDDGSTASTAILVGNHLYVANVGDSRTVISKAGKAIPLSEDHKPNRCDERKRIENAGGVVMWAGTWRVGGVLAMSRAFGNRMLKQFVVAEPEIQDLEVDEGFELLVLASDGLWDVVPNEDAVALARTGEEPEIAARKLTETAFTRGSADNITCIVVRFHHV************
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
MTDTKLAISETYQQTDVDFLESERDTYRDDGSTASTAILVGNHLYVANVGDSRTVISKAGKAIPLSEDHKPNRCDERKRIENAGGVVMWAGTWRVGGVLAMSRAFGNRMLKQFVVAEPEIQDLEVDEGFELLVLASDGLWDVVPNEDAVALARTGEEPEIAARKLTETAFTRGSADNITCIVVRFHHVNEDPAEPEVEQE
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query200 2.2.26 [Sep-21-2011]
Q94AT1420 Probable protein phosphat yes no 0.935 0.445 0.855 2e-92
Q6L5C4491 Probable protein phosphat yes no 0.935 0.380 0.818 2e-88
Q6EN45363 Probable protein phosphat no no 0.935 0.515 0.802 1e-84
Q0JL75377 Probable protein phosphat no no 0.94 0.498 0.75 6e-79
Q0DBU3352 Probable protein phosphat no no 0.935 0.531 0.670 4e-68
Q8LAY8354 Probable protein phosphat no no 0.925 0.522 0.659 3e-67
Q8RXV3311 Probable protein phosphat no no 0.925 0.594 0.648 8e-67
Q652Z7378 Probable protein phosphat no no 0.935 0.494 0.648 2e-66
Q4PSE8 447 Probable protein phosphat no no 0.925 0.413 0.637 6e-66
Q5Z6F5327 Probable protein phosphat no no 0.96 0.587 0.622 6e-64
>sp|Q94AT1|P2C76_ARATH Probable protein phosphatase 2C 76 OS=Arabidopsis thaliana GN=At5g53140 PE=2 SV=1 Back     alignment and function desciption
 Score =  337 bits (865), Expect = 2e-92,   Method: Compositional matrix adjust.
 Identities = 160/187 (85%), Positives = 177/187 (94%)

Query: 1   MTDTKLAISETYQQTDVDFLESERDTYRDDGSTASTAILVGNHLYVANVGDSRTVISKAG 60
           +TDTKLA++ETY+QTDV FLESE+DTYRDDGSTAS A+LVGNHLYVANVGDSRT++SKAG
Sbjct: 163 LTDTKLALNETYKQTDVAFLESEKDTYRDDGSTASAAVLVGNHLYVANVGDSRTIVSKAG 222

Query: 61  KAIPLSEDHKPNRCDERKRIENAGGVVMWAGTWRVGGVLAMSRAFGNRMLKQFVVAEPEI 120
           KAI LS+DHKPNR DERKRIE+AGGV+MWAGTWRVGGVLAMSRAFGNRMLKQFVVAEPEI
Sbjct: 223 KAIALSDDHKPNRSDERKRIESAGGVIMWAGTWRVGGVLAMSRAFGNRMLKQFVVAEPEI 282

Query: 121 QDLEVDEGFELLVLASDGLWDVVPNEDAVALARTGEEPEIAARKLTETAFTRGSADNITC 180
           QDLE+D   ELLVLASDGLWDVVPNEDAVALA++ EEPE AARKLT+TAF+RGSADNITC
Sbjct: 283 QDLEIDHEAELLVLASDGLWDVVPNEDAVALAQSEEEPEAAARKLTDTAFSRGSADNITC 342

Query: 181 IVVRFHH 187
           IVV+F H
Sbjct: 343 IVVKFRH 349

Arabidopsis thaliana (taxid: 3702)
EC: 3EC: .EC: 1EC: .EC: 3EC: .EC: 1EC: 6
>sp|Q6L5C4|P2C52_ORYSJ Probable protein phosphatase 2C 52 OS=Oryza sativa subsp. japonica GN=Os05g0587100 PE=2 SV=1 Back     alignment and function description
>sp|Q6EN45|P2C13_ORYSJ Probable protein phosphatase 2C 13 OS=Oryza sativa subsp. japonica GN=Os02g0255100 PE=2 SV=1 Back     alignment and function description
>sp|Q0JL75|P2C07_ORYSJ Probable protein phosphatase 2C 7 OS=Oryza sativa subsp. japonica GN=Os01g0618200 PE=2 SV=2 Back     alignment and function description
>sp|Q0DBU3|P2C56_ORYSJ Probable protein phosphatase 2C 56 OS=Oryza sativa subsp. japonica GN=Os06g0526800 PE=2 SV=2 Back     alignment and function description
>sp|Q8LAY8|P2C69_ARATH Probable protein phosphatase 2C 69 OS=Arabidopsis thaliana GN=At5g10740 PE=2 SV=1 Back     alignment and function description
>sp|Q8RXV3|P2C59_ARATH Probable protein phosphatase 2C 59 OS=Arabidopsis thaliana GN=WIN2 PE=1 SV=1 Back     alignment and function description
>sp|Q652Z7|P2C55_ORYSJ Probable protein phosphatase 2C 55 OS=Oryza sativa subsp. japonica GN=Os06g0526700 PE=2 SV=2 Back     alignment and function description
>sp|Q4PSE8|P2C71_ARATH Probable protein phosphatase 2C 71 OS=Arabidopsis thaliana GN=At5g24940 PE=2 SV=1 Back     alignment and function description
>sp|Q5Z6F5|P2C59_ORYSJ Probable protein phosphatase 2C 59 OS=Oryza sativa subsp. japonica GN=Os06g0698300 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query200
147774596 308 hypothetical protein VITISV_021634 [Viti 0.995 0.646 0.884 2e-98
225462735 351 PREDICTED: probable protein phosphatase 0.995 0.566 0.884 2e-98
255545028262 protein phosphatase 2c, putative [Ricinu 0.98 0.748 0.877 1e-96
194241584 349 protein phosphatase 2C [Hevea brasiliens 0.98 0.561 0.862 1e-94
224132932 351 predicted protein [Populus trichocarpa] 0.98 0.558 0.846 4e-94
224120654 308 predicted protein [Populus trichocarpa] 0.975 0.633 0.857 5e-94
312282167 412 unnamed protein product [Thellungiella h 1.0 0.485 0.830 6e-93
356546134 356 PREDICTED: probable protein phosphatase 0.98 0.550 0.841 3e-92
9757995 307 protein phosphatase 2C-like [Arabidopsis 0.935 0.609 0.855 3e-91
356552819 356 PREDICTED: probable protein phosphatase 0.98 0.550 0.826 1e-90
>gi|147774596|emb|CAN72151.1| hypothetical protein VITISV_021634 [Vitis vinifera] Back     alignment and taxonomy information
 Score =  363 bits (933), Expect = 2e-98,   Method: Compositional matrix adjust.
 Identities = 176/199 (88%), Positives = 185/199 (92%)

Query: 1   MTDTKLAISETYQQTDVDFLESERDTYRDDGSTASTAILVGNHLYVANVGDSRTVISKAG 60
           MT+TKLAISETYQQTD++FL++ERDTYRDDGSTASTA+LVGNHLYVANVGDSR VISKAG
Sbjct: 109 MTNTKLAISETYQQTDMNFLDAERDTYRDDGSTASTAVLVGNHLYVANVGDSRAVISKAG 168

Query: 61  KAIPLSEDHKPNRCDERKRIENAGGVVMWAGTWRVGGVLAMSRAFGNRMLKQFVVAEPEI 120
           KAIPLSEDHKPNR DERKRIENAGGVVMWAGTWRVGGVLAMSRAFGNRMLKQ+VVAEPEI
Sbjct: 169 KAIPLSEDHKPNRSDERKRIENAGGVVMWAGTWRVGGVLAMSRAFGNRMLKQYVVAEPEI 228

Query: 121 QDLEVDEGFELLVLASDGLWDVVPNEDAVALARTGEEPEIAARKLTETAFTRGSADNITC 180
           QD EVDE  ELLVLASDGLWDVVPNEDA+ALART EEPE  ARKLTETAFTRGSADNITC
Sbjct: 229 QDQEVDEELELLVLASDGLWDVVPNEDAIALARTEEEPEAGARKLTETAFTRGSADNITC 288

Query: 181 IVVRFHHVNEDPAEPEVEQ 199
           IVVRFHH   DP  P +EQ
Sbjct: 289 IVVRFHHEKVDPDPPNMEQ 307

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|225462735|ref|XP_002269132.1| PREDICTED: probable protein phosphatase 2C 76 [Vitis vinifera] gi|302143680|emb|CBI22541.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|255545028|ref|XP_002513575.1| protein phosphatase 2c, putative [Ricinus communis] gi|223547483|gb|EEF48978.1| protein phosphatase 2c, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|194241584|gb|ACF35047.1| protein phosphatase 2C [Hevea brasiliensis] Back     alignment and taxonomy information
>gi|224132932|ref|XP_002321445.1| predicted protein [Populus trichocarpa] gi|222868441|gb|EEF05572.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|224120654|ref|XP_002318384.1| predicted protein [Populus trichocarpa] gi|222859057|gb|EEE96604.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|312282167|dbj|BAJ33949.1| unnamed protein product [Thellungiella halophila] Back     alignment and taxonomy information
>gi|356546134|ref|XP_003541486.1| PREDICTED: probable protein phosphatase 2C 76-like [Glycine max] Back     alignment and taxonomy information
>gi|9757995|dbj|BAB08417.1| protein phosphatase 2C-like [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|356552819|ref|XP_003544760.1| PREDICTED: probable protein phosphatase 2C 76-like [Glycine max] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query200
TAIR|locus:2163781420 AT5G53140 [Arabidopsis thalian 0.98 0.466 0.818 1.7e-84
TAIR|locus:2183695354 AT5G10740 [Arabidopsis thalian 0.925 0.522 0.659 1.3e-61
TAIR|locus:2124784311 WIN2 "HOPW1-1-interacting 2" [ 0.925 0.594 0.648 4.3e-61
TAIR|locus:2149363 447 AT5G24940 [Arabidopsis thalian 0.925 0.413 0.637 3.9e-60
TAIR|locus:2029172371 AT1G43900 [Arabidopsis thalian 0.92 0.495 0.583 1.8e-55
TAIR|locus:2194734283 AT1G78200 [Arabidopsis thalian 0.925 0.653 0.441 1.5e-35
TAIR|locus:2008341282 AT1G34750 [Arabidopsis thalian 0.895 0.634 0.464 1.3e-34
TAIR|locus:2121373283 AT4G28400 [Arabidopsis thalian 0.91 0.643 0.446 1.5e-33
TAIR|locus:2008545445 AT1G67820 [Arabidopsis thalian 0.695 0.312 0.479 1.9e-33
UNIPROTKB|E1BTL4360 PPM1L "Uncharacterized protein 0.86 0.477 0.451 2e-33
TAIR|locus:2163781 AT5G53140 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 846 (302.9 bits), Expect = 1.7e-84, P = 1.7e-84
 Identities = 162/198 (81%), Positives = 182/198 (91%)

Query:     1 MTDTKLAISETYQQTDVDFLESERDTYRDDGSTASTAILVGNHLYVANVGDSRTVISKAG 60
             +TDTKLA++ETY+QTDV FLESE+DTYRDDGSTAS A+LVGNHLYVANVGDSRT++SKAG
Sbjct:   163 LTDTKLALNETYKQTDVAFLESEKDTYRDDGSTASAAVLVGNHLYVANVGDSRTIVSKAG 222

Query:    61 KAIPLSEDHKPNRCDERKRIENAGGVVMWAGTWRVGGVLAMSRAFGNRMLKQFVVAEPEI 120
             KAI LS+DHKPNR DERKRIE+AGGV+MWAGTWRVGGVLAMSRAFGNRMLKQFVVAEPEI
Sbjct:   223 KAIALSDDHKPNRSDERKRIESAGGVIMWAGTWRVGGVLAMSRAFGNRMLKQFVVAEPEI 282

Query:   121 QDLEVDEGFELLVLASDGLWDVVPNEDAVALARTGEEPEIAARKLTETAFTRGSADNITC 180
             QDLE+D   ELLVLASDGLWDVVPNEDAVALA++ EEPE AARKLT+TAF+RGSADNITC
Sbjct:   283 QDLEIDHEAELLVLASDGLWDVVPNEDAVALAQSEEEPEAAARKLTDTAFSRGSADNITC 342

Query:   181 IVVRFHHVNEDPAEPEVE 198
             IVV+F H  +    P++E
Sbjct:   343 IVVKFRH--DKTESPKIE 358
GO:0003824 "catalytic activity" evidence=IEA
GO:0004722 "protein serine/threonine phosphatase activity" evidence=IEA;ISS
GO:0006470 "protein dephosphorylation" evidence=IEA
GO:0008287 "protein serine/threonine phosphatase complex" evidence=IEA
GO:0048767 "root hair elongation" evidence=RCA
TAIR|locus:2183695 AT5G10740 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2124784 WIN2 "HOPW1-1-interacting 2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2149363 AT5G24940 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2029172 AT1G43900 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2194734 AT1G78200 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2008341 AT1G34750 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2121373 AT4G28400 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2008545 AT1G67820 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
UNIPROTKB|E1BTL4 PPM1L "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q94AT1P2C76_ARATH3, ., 1, ., 3, ., 1, 60.85560.9350.4452yesno
Q6L5C4P2C52_ORYSJ3, ., 1, ., 3, ., 1, 60.81810.9350.3808yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer3.1.3.16LOW CONFIDENCE prediction!
3rd Layer3.1.3LOW CONFIDENCE prediction!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
GSVIVG00006501001
SubName- Full=Chromosome undetermined scaffold_171, whole genome shotgun sequence; (351 aa)
(Vitis vinifera)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query200
cd00143254 cd00143, PP2Cc, Serine/threonine phosphatases, fam 1e-68
smart00332252 smart00332, PP2Cc, Serine/threonine phosphatases, 3e-62
pfam00481252 pfam00481, PP2C, Protein phosphatase 2C 6e-56
COG0631262 COG0631, PTC1, Serine/threonine protein phosphatas 3e-37
PTZ00224381 PTZ00224, PTZ00224, protein phosphatase 2C; Provis 3e-35
PLN03145365 PLN03145, PLN03145, Protein phosphatase 2c; Provis 5e-32
PRK14559645 PRK14559, PRK14559, putative protein serine/threon 0.001
>gnl|CDD|238083 cd00143, PP2Cc, Serine/threonine phosphatases, family 2C, catalytic domain; The protein architecture and deduced catalytic mechanism of PP2C phosphatases are similar to the PP1, PP2A, PP2B family of protein Ser/Thr phosphatases, with which PP2C shares no sequence similarity Back     alignment and domain information 
 Score =  209 bits (535), Expect = 1e-68
 Identities = 85/188 (45%), Positives = 123/188 (65%), Gaps = 8/188 (4%)

Query: 3   DTKLAISETYQQTDVDFLESERDTYRDD--GSTASTAILVGNHLYVANVGDSRTVISKAG 60
           D + A+ + + + D + LE  +D   D   G+TA  A++ GN LYVANVGDSR V+ + G
Sbjct: 70  DIEEALRKAFLRADEEILEEAQDEPDDARSGTTAVVALIRGNKLYVANVGDSRAVLCRNG 129

Query: 61  KAIPLSEDHKPNRCDERKRIENAGGVVMWAGTWRVGGVLAMSRAFGNRMLKQFVVAEPEI 120
           +A+ L++DHKP   +ER+RIE AGG V      RV GVLA++RA G+  LK  V AEP++
Sbjct: 130 EAVQLTKDHKPVNEEERERIEKAGGRVSN---GRVPGVLAVTRALGDFDLKPGVSAEPDV 186

Query: 121 QDLEVDEGFELLVLASDGLWDVVPNEDAVALAR---TGEEPEIAARKLTETAFTRGSADN 177
             +++ E  + L+LASDGLWDV+ N++AV + R     E+ + AA++L + A  RGS DN
Sbjct: 187 TVVKLTEDDDFLILASDGLWDVLSNQEAVDIVRSELAKEDLQEAAQELVDLALRRGSHDN 246

Query: 178 ITCIVVRF 185
           IT +VVR 
Sbjct: 247 ITVVVVRL 254

Length = 254
>gnl|CDD|214625 smart00332, PP2Cc, Serine/threonine phosphatases, family 2C, catalytic domain Back     alignment and domain information
>gnl|CDD|215938 pfam00481, PP2C, Protein phosphatase 2C Back     alignment and domain information
>gnl|CDD|223704 COG0631, PTC1, Serine/threonine protein phosphatase [Signal transduction mechanisms] Back     alignment and domain information
>gnl|CDD|240318 PTZ00224, PTZ00224, protein phosphatase 2C; Provisional Back     alignment and domain information
>gnl|CDD|215603 PLN03145, PLN03145, Protein phosphatase 2c; Provisional Back     alignment and domain information
>gnl|CDD|237756 PRK14559, PRK14559, putative protein serine/threonine phosphatase; Provisional Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 200
PLN03145365 Protein phosphatase 2c; Provisional 100.0
COG0631262 PTC1 Serine/threonine protein phosphatase [Signal 100.0
PTZ00224381 protein phosphatase 2C; Provisional 100.0
PF00481254 PP2C: Protein phosphatase 2C; InterPro: IPR001932 100.0
KOG0698330 consensus Serine/threonine protein phosphatase [Si 100.0
KOG0697379 consensus Protein phosphatase 1B (formerly 2C) [Si 100.0
cd00143254 PP2Cc Serine/threonine phosphatases, family 2C, ca 100.0
PRK14559645 putative protein serine/threonine phosphatase; Pro 100.0
smart00332255 PP2Cc Serine/threonine phosphatases, family 2C, ca 100.0
KOG0699542 consensus Serine/threonine protein phosphatase [Si 100.0
KOG0700390 consensus Protein phosphatase 2C/pyruvate dehydrog 99.97
KOG1323493 consensus Serine/threonine phosphatase [Signal tra 99.92
KOG1379330 consensus Serine/threonine protein phosphatase [Si 99.85
KOG0618 1081 consensus Serine/threonine phosphatase 2C containi 99.82
smart00331193 PP2C_SIG Sigma factor PP2C-like phosphatases. 99.67
TIGR02865764 spore_II_E stage II sporulation protein E. Stage I 99.59
PF13672212 PP2C_2: Protein phosphatase 2C; PDB: 2JFT_A 2JFS_A 99.56
PF07228193 SpoIIE: Stage II sporulation protein E (SpoIIE); I 99.54
COG2208367 RsbU Serine phosphatase RsbU, regulator of sigma s 98.61
>PLN03145 Protein phosphatase 2c; Provisional Back     alignment and domain information 
Probab=100.00  E-value=2.1e-42  Score=285.70  Aligned_cols=187  Identities=37%  Similarity=0.596  Sum_probs=163.3

Q ss_pred             ccHHHHHHHHHHHHHHHHHhhh-cCCCCCCCceEEEEEEECCEEEEEEecCccEEEEeCCceeeCCCCCCCCChhHHHHH
Q 029027            2 TDTKLAISETYQQTDVDFLESE-RDTYRDDGSTASTAILVGNHLYVANVGDSRTVISKAGKAIPLSEDHKPNRCDERKRI   80 (200)
Q Consensus         2 ~~~~~~l~~a~~~~n~~i~~~~-~~~~~~~gtT~~~~~i~~~~~~~~~vGDSr~y~~r~g~~~~lt~dh~~~~~~e~~~i   80 (200)
                      .+++++|.++|..+|+.+.+.. ......||||++++++.++++|++||||||+|++|+|++.+||+||++.++.|++||
T Consensus       137 ~~~~~al~~af~~~d~~~~~~~~~~~~~~~GTTavv~li~~~~l~vaNvGDSRayl~r~g~~~~LT~DH~~~~~~E~~RI  216 (365)
T PLN03145        137 REIEKVVSSAFLQTDTAFAEACSLDASLASGTTALAALVVGRSLVVANAGDCRAVLCRRGKAIEMSRDHKPMCSKERKRI  216 (365)
T ss_pred             hhHHHHHHHHHHHHhHHHHhhhccccCCCCcCcEEEEEEECCeEEEEecCCceEEEEcCCeEEEecCCCCCCCHHHHHHH
Confidence            3577889999999999987763 233445999999999999999999999999999999999999999999999999999


Q ss_pred             HHhCCeEEeCCceeeeceeecccccCCccccc-------ccccCCceeEEEeecCceEEEEEcCCCcCCCChHHHHHHH-
Q 029027           81 ENAGGVVMWAGTWRVGGVLAMSRAFGNRMLKQ-------FVVAEPEIQDLEVDEGFELLVLASDGLWDVVPNEDAVALA-  152 (200)
Q Consensus        81 ~~~~g~~~~~~~~~~~~~~~~tr~lG~~~~~~-------~~~~~p~~~~~~l~~~~d~liL~SDGv~d~l~~~~i~~i~-  152 (200)
                      .+.||.+..   .++++.+.+||+||+..+|.       .++++|++..+++.++++|||||||||||+++++++.+++ 
T Consensus       217 ~~~Gg~v~~---g~v~g~l~vTRalGD~~~k~~k~~~~~~vs~ePdv~~~~l~~~D~fLILaSDGLwdvls~ee~v~~i~  293 (365)
T PLN03145        217 EASGGYVYD---GYLNGQLNVARALGDWHMEGMKGSDGGPLSAEPELMTTQLTEEDEFLIIGCDGIWDVFRSQNAVDFAR  293 (365)
T ss_pred             HHcCCceec---ceECCccccccccccccccccccccCCCcceEEEEEEEECCCCCEEEEEeCCccccCcCHHHHHHHHH
Confidence            999998853   36677788999999977652       3678999999999998778889999999999999986555 


Q ss_pred             ---HcCCCHHHHHHHHHHHHHhcCCCCceEEEEEEccCCCCC
Q 029027          153 ---RTGEEPEIAARKLTETAFTRGSADNITCIVVRFHHVNED  191 (200)
Q Consensus       153 ---~~~~~~~~~a~~l~~~a~~~g~~DN~T~ivi~~~~~~~~  191 (200)
                         ....+++++|+.|++.|+.+|+.||+|+|||+|...++.
T Consensus       294 ~~l~~~~~p~~aa~~Lv~~Al~rgs~DNITvIVV~l~~~~~~  335 (365)
T PLN03145        294 RRLQEHNDPVMCSKELVDEALKRKSGDNLAVVVVCFQSQPPP  335 (365)
T ss_pred             HHHhcCCCHHHHHHHHHHHHHhCCCCCCEEEEEEEeecCCCc
Confidence               345689999999999999999999999999999985443

>COG0631 PTC1 Serine/threonine protein phosphatase [Signal transduction mechanisms] Back     alignment and domain information
>PTZ00224 protein phosphatase 2C; Provisional Back     alignment and domain information
>PF00481 PP2C: Protein phosphatase 2C; InterPro: IPR001932 This domain is found in protein phosphatase 2C, as well as other proteins eg Back     alignment and domain information
>KOG0698 consensus Serine/threonine protein phosphatase [Signal transduction mechanisms] Back     alignment and domain information
>KOG0697 consensus Protein phosphatase 1B (formerly 2C) [Signal transduction mechanisms] Back     alignment and domain information
>cd00143 PP2Cc Serine/threonine phosphatases, family 2C, catalytic domain; The protein architecture and deduced catalytic mechanism of PP2C phosphatases are similar to the PP1, PP2A, PP2B family of protein Ser/Thr phosphatases, with which PP2C shares no sequence similarity Back     alignment and domain information
>PRK14559 putative protein serine/threonine phosphatase; Provisional Back     alignment and domain information
>smart00332 PP2Cc Serine/threonine phosphatases, family 2C, catalytic domain Back     alignment and domain information
>KOG0699 consensus Serine/threonine protein phosphatase [Signal transduction mechanisms] Back     alignment and domain information
>KOG0700 consensus Protein phosphatase 2C/pyruvate dehydrogenase (lipoamide) phosphatase [Signal transduction mechanisms] Back     alignment and domain information
>KOG1323 consensus Serine/threonine phosphatase [Signal transduction mechanisms] Back     alignment and domain information
>KOG1379 consensus Serine/threonine protein phosphatase [Signal transduction mechanisms] Back     alignment and domain information
>KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms] Back     alignment and domain information
>smart00331 PP2C_SIG Sigma factor PP2C-like phosphatases Back     alignment and domain information
>TIGR02865 spore_II_E stage II sporulation protein E Back     alignment and domain information
>PF13672 PP2C_2: Protein phosphatase 2C; PDB: 2JFT_A 2JFS_A 2V06_A 2JFR_A 2J86_A 2J82_A 2Y09_A 2XZV_A 2CM1_A 1TXO_B Back     alignment and domain information
>PF07228 SpoIIE: Stage II sporulation protein E (SpoIIE); InterPro: IPR001932 This domain is found in protein phosphatase 2C, as well as other proteins eg Back     alignment and domain information
>COG2208 RsbU Serine phosphatase RsbU, regulator of sigma subunit [Signal transduction mechanisms / Transcription] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query200
4ds8_B343 Complex Structure Of Abscisic Acid Receptor Pyl3-(+ 2e-32
3rt0_A340 Crystal Structure Of Pyl10-Hab1 Complex In The Abse 2e-32
3ujg_B350 Crystal Structure Of Snrk2.6 In Complex With Hab1 L 2e-32
3nmt_B341 Crystal Structure Of Pyrabactin Bound Abscisic Acid 2e-32
3kb3_B321 Crystal Structure Of Abscisic Acid-Bound Pyl2 In Co 2e-32
3qn1_B337 Crystal Structure Of The Pyr1 Abscisic Acid Recepto 2e-32
3nmn_B319 Crystal Structure Of Pyrabactin-Bound Abscisic Acid 2e-30
3kdj_B316 Complex Structure Of (+)-Aba-Bound Pyl1 And Abi1 Le 2e-30
3jrq_A326 Crystal Structure Of (+)-aba-bound Pyl1 In Complex 2e-30
3nmv_B324 Crystal Structure Of Pyrabactin-Bound Abscisic Acid 3e-29
2i0o_A304 Crystal Structure Of Anopheles Gambiae SerTHR PHOSP 1e-24
1a6q_A382 Crystal Structure Of The Protein SerineTHREONINE PH 5e-23
3fxj_A390 Crystal Structure Of Human Protein Phosphatase 1a ( 5e-23
4da1_A389 Crystal Structure Of Branched-Chain Alpha-Ketoacid 7e-23
2iq1_A274 Crystal Structure Of Human Ppm1k Length = 274 1e-22
2p8e_A307 Crystal Structure Of The SerineTHREONINE PHOSPHATAS 2e-22
2isn_A364 Crystal Structure Of A Phosphatase From A Pathogeni 3e-13
2i44_A324 Crystal Structure Of Serine-Threonine Phosphatase 2 1e-11
3d8k_A377 Crsytal Structure Of A Phosphatase From A Toxoplasm 1e-06
2j4o_A401 Structure Of Tab1 Length = 401 1e-05
3mq3_A467 Crystal Structure Of Native Bovine Pdp1c Length = 4 1e-05
2pom_A372 Tab1 With Manganese Ion Length = 372 1e-05
2pnq_A467 Crystal Structure Of Pyruvate Dehydrogenase Phospha 1e-05
2pop_A353 The Crystal Structure Of Tab1 And Bir1 Complex Leng 1e-05
2pk0_A250 Structure Of The S. Agalactiae Serine/threonine Pho 1e-04
2irm_A358 Crystal Structure Of Mitogen-Activated Protein Kina 7e-04
>pdb|4DS8|B Chain B, Complex Structure Of Abscisic Acid Receptor Pyl3-(+)-Aba-Hab1 In The Presence Of Mn2+ Length = 343 Back     alignment and structure 
Iteration: 1

 Score =  135 bits (339), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 78/175 (44%), Positives = 105/175 (60%), Gaps = 23/175 (13%)
Query: 31  GSTASTAILVGNHLYVANVGDSRTVISKAGKAIPLSEDHKPNRCDERKRIENAGG-VVMW 89
           GSTA  A++  +H+ V+N GDSR V+ +  +A+PLS DHKP+R DE  RIENAGG V+ W
Sbjct: 158 GSTAVVALVCSSHIVVSNCGDSRAVLFRGKEAMPLSVDHKPDREDEYARIENAGGKVIQW 217
Query: 90  AGTWRVGGVLAMSRAFGNRMLKQFVVAEPEIQDLEVDEGFELLVLASDGLWDVVPNEDAV 149
            G  RV GVLAMSR+ G+R LK +V+ EPE+  +      E L+LASDGLWDV+ N++  
Sbjct: 218 QGA-RVFGVLAMSRSIGDRYLKPYVIPEPEVTFMPRSREDECLILASDGLWDVMNNQEVC 276
Query: 150 ALAR---------TGEEP------------EIAARKLTETAFTRGSADNITCIVV 183
            +AR          G  P            + AA  L+  A  +GS DNI+ IV+
Sbjct: 277 EIARRRILMWHKKNGAPPLAERGKGIDPACQAAADYLSMLALQKGSKDNISIIVI 331
>pdb|3RT0|A Chain A, Crystal Structure Of Pyl10-Hab1 Complex In The Absence Of Abscisic Acid (Aba) Length = 340 Back     alignment and structure
>pdb|3UJG|B Chain B, Crystal Structure Of Snrk2.6 In Complex With Hab1 Length = 350 Back     alignment and structure
>pdb|3NMT|B Chain B, Crystal Structure Of Pyrabactin Bound Abscisic Acid Receptor Pyl2 Mutant A93f In Complex With Type 2c Protein Phosphatase Hab1 Length = 341 Back     alignment and structure
>pdb|3KB3|B Chain B, Crystal Structure Of Abscisic Acid-Bound Pyl2 In Complex With Hab1 Length = 321 Back     alignment and structure
>pdb|3QN1|B Chain B, Crystal Structure Of The Pyr1 Abscisic Acid Receptor In Complex With The Hab1 Type 2c Phosphatase Catalytic Domain Length = 337 Back     alignment and structure
>pdb|3NMN|B Chain B, Crystal Structure Of Pyrabactin-Bound Abscisic Acid Receptor Pyl1 In Complex With Type 2c Protein Phosphatase Abi1 Length = 319 Back     alignment and structure
>pdb|3KDJ|B Chain B, Complex Structure Of (+)-Aba-Bound Pyl1 And Abi1 Length = 316 Back     alignment and structure
>pdb|3JRQ|A Chain A, Crystal Structure Of (+)-aba-bound Pyl1 In Complex With Abi1 Length = 326 Back     alignment and structure
>pdb|3NMV|B Chain B, Crystal Structure Of Pyrabactin-Bound Abscisic Acid Receptor Pyl2 Mutant A93f In Complex With Type 2c Protein Phosphatase Abi2 Length = 324 Back     alignment and structure
>pdb|2I0O|A Chain A, Crystal Structure Of Anopheles Gambiae SerTHR PHOSPHATASE COMPLEXED With Zn2+ Length = 304 Back     alignment and structure
>pdb|1A6Q|A Chain A, Crystal Structure Of The Protein SerineTHREONINE PHOSPHATASE 2C AT 2 A Resolution Length = 382 Back     alignment and structure
>pdb|3FXJ|A Chain A, Crystal Structure Of Human Protein Phosphatase 1a (Ppm1a) Bound With Phosphate At 3 Mm Of Mn2+ Length = 390 Back     alignment and structure
>pdb|4DA1|A Chain A, Crystal Structure Of Branched-Chain Alpha-Ketoacid Dehydrogenase Phosphatase With Mg (Ii) Ions At The Active Site Length = 389 Back     alignment and structure
>pdb|2IQ1|A Chain A, Crystal Structure Of Human Ppm1k Length = 274 Back     alignment and structure
>pdb|2P8E|A Chain A, Crystal Structure Of The SerineTHREONINE PHOSPHATASE Domain Of Human Ppm1b Length = 307 Back     alignment and structure
>pdb|2ISN|A Chain A, Crystal Structure Of A Phosphatase From A Pathogenic Strain Toxoplasma Gondii Length = 364 Back     alignment and structure
>pdb|2I44|A Chain A, Crystal Structure Of Serine-Threonine Phosphatase 2c From Toxoplasma Gondii Length = 324 Back     alignment and structure
>pdb|3D8K|A Chain A, Crsytal Structure Of A Phosphatase From A Toxoplasma Gondii Length = 377 Back     alignment and structure
>pdb|2J4O|A Chain A, Structure Of Tab1 Length = 401 Back     alignment and structure
>pdb|3MQ3|A Chain A, Crystal Structure Of Native Bovine Pdp1c Length = 467 Back     alignment and structure
>pdb|2POM|A Chain A, Tab1 With Manganese Ion Length = 372 Back     alignment and structure
>pdb|2PNQ|A Chain A, Crystal Structure Of Pyruvate Dehydrogenase Phosphatase 1 (Pdp1) Length = 467 Back     alignment and structure
>pdb|2POP|A Chain A, The Crystal Structure Of Tab1 And Bir1 Complex Length = 353 Back     alignment and structure
>pdb|2PK0|A Chain A, Structure Of The S. Agalactiae Serine/threonine Phosphatase At 2.65 Resolution Length = 250 Back     alignment and structure
>pdb|2IRM|A Chain A, Crystal Structure Of Mitogen-Activated Protein Kinase Kinase Kinase 7 Interacting Protein 1 From Anopheles Gambiae Length = 358 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query200
3kdj_B316 Protein phosphatase 2C 56; ABA, PYL1, abscisic aci 3e-86
2iq1_A274 Protein phosphatase 2C kappa, PPM1K; structural ge 3e-85
4da1_A389 Protein phosphatase 1K, mitochondrial; metal-ION-a 3e-84
3qn1_B337 Protein phosphatase 2C 16; start domain, BET V dom 2e-83
1a6q_A382 Phosphatase 2C; catalytic mechanism, metalloenzyme 1e-81
2p8e_A307 PPM1B beta isoform variant 6; structural genomics, 2e-81
2i0o_A304 Ser/Thr phosphatase; beta sandwich, structural gen 6e-75
2i44_A324 Serine-threonine phosphatase 2C; PSI-2, 8817Z, str 2e-73
3d8k_A377 PP2C, protein phosphatase 2C; nysgrc, PSI-II, STR 6e-70
2isn_A364 NYSGXRC-8828Z, phosphatase; pathogenic strain, pra 9e-68
2irm_A358 Mitogen-activated protein kinase kinase kinase 7 i 2e-55
2j4o_A401 Mitogen-activated protein kinase kinase kinase 7-i 6e-52
2pnq_A467 [pyruvate dehydrogenase [lipoamide]]-phosphatase 1 9e-35
2pk0_A250 Serine/threonine protein phosphatase STP1; SI moti 5e-22
1txo_A237 Putative bacterial enzyme; serine/threonine protei 1e-20
2jfr_A234 Ser-Thr phosphatase MSPP; hydrolase, PPM phosphata 2e-17
2j82_A240 TPPHA, protein serine-threonine phosphatase; PP2C 3e-17
3rnr_A211 Stage II sporulation E family protein; structural 2e-15
>3kdj_B Protein phosphatase 2C 56; ABA, PYL1, abscisic acid signaling pathway, cell membr hydrolase, magnesium, manganese, metal-binding, nucleus; HET: A8S; 1.88A {Arabidopsis thaliana} PDB: 3nmn_B* 3jrq_A* 3ujk_A 3nmv_B 3ujl_B* Length = 316 Back     alignment and structure
 Score =  255 bits (654), Expect = 3e-86
 Identities = 75/221 (33%), Positives = 115/221 (52%), Gaps = 30/221 (13%)

Query: 2   TDTKLAISETYQQTDVDFLESERDTYRDDGSTASTAILVGNHLYVANVGDSRTVISKAGK 61
              K A+  ++ + D +      +     GST+  A++  +H++VAN GDSR V+ +   
Sbjct: 97  EKWKKALFNSFLRVDSEIESVAPE---TVGSTSVVAVVFPSHIFVANCGDSRAVLCRGKT 153

Query: 62  AIPLSEDHKPNRCDERKRIENAGGVVMWAGTWRVGGVLAMSRAFGNRMLKQFVVAEPEIQ 121
           A+PLS DHKP+R DE  RIE AGG V+     RV GVLAMSR+ G+R LK  ++ +PE+ 
Sbjct: 154 ALPLSVDHKPDREDEAARIEAAGGKVIQWNGARVFGVLAMSRSIGDRYLKPSIIPDPEVT 213

Query: 122 DLEVDEGFELLVLASDGLWDVVPNEDAVALAR---------------------------T 154
            ++  +  + L+LASDG+WDV+ +E+A  +AR                            
Sbjct: 214 AVKRVKEDDCLILASDGVWDVMTDEEACEMARKRILLWHKKNAVAGGASLLADERRKEGK 273

Query: 155 GEEPEIAARKLTETAFTRGSADNITCIVVRFHHVNEDPAEP 195
                 AA  L++ A  RGS DNI+ +VV      +  ++P
Sbjct: 274 DPAAMSAAEYLSKLAIQRGSKDNISVVVVDLKPRRKLKSKP 314
>2iq1_A Protein phosphatase 2C kappa, PPM1K; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.25A {Homo sapiens} Length = 274 Back     alignment and structure
>4da1_A Protein phosphatase 1K, mitochondrial; metal-ION-assisted catalysis, dehydrogenase phosphatase, hydrolase; 2.38A {Homo sapiens} PDB: 3qht_A 1l2n_A Length = 389 Back     alignment and structure
>3qn1_B Protein phosphatase 2C 16; start domain, BET V domain, PYR/PYL/RCAR, PP2C, abscisic ACI receptor, type 2C protein phosphatase; HET: A8S; 1.80A {Arabidopsis thaliana} PDB: 3ujg_B 3nmt_B* 3rt0_A 3kb3_B* Length = 337 Back     alignment and structure
>1a6q_A Phosphatase 2C; catalytic mechanism, metalloenzyme, transductuin, hydrolase; 2.00A {Homo sapiens} SCOP: a.159.1.1 d.219.1.1 PDB: 3fxk_A 3fxj_A 3fxl_A* 3fxm_A* 3fxo_A Length = 382 Back     alignment and structure
>2p8e_A PPM1B beta isoform variant 6; structural genomics, hydrolase, PSI-2, protein structure initiative; 1.82A {Homo sapiens} Length = 307 Back     alignment and structure
>2i0o_A Ser/Thr phosphatase; beta sandwich, structural genomics, PSI, protei structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Anopheles gambiae} Length = 304 Back     alignment and structure
>2i44_A Serine-threonine phosphatase 2C; PSI-2, 8817Z, structural genomics, protein structure initiative; 2.04A {Toxoplasma gondii} Length = 324 Back     alignment and structure
>3d8k_A PP2C, protein phosphatase 2C; nysgrc, PSI-II, STR genomics, protein structure initiative, NEW YORK structural research consortium, nysgxrc; 2.71A {Toxoplasma gondii} Length = 377 Back     alignment and structure
>2isn_A NYSGXRC-8828Z, phosphatase; pathogenic strain, praseodymium, sulfate structural genomics, PSI-2, protein structure initiative; 1.90A {Toxoplasma gondii} Length = 364 Back     alignment and structure
>2irm_A Mitogen-activated protein kinase kinase kinase 7 interacting protein 1; TAK1-binding protein, TAB1; 3.00A {Anopheles gambiae} Length = 358 Back     alignment and structure
>2j4o_A Mitogen-activated protein kinase kinase kinase 7-interacting protein 1; TGF-beta, pseudo-phosphatase, TAK1 binding protein, protein binding; 2.25A {Homo sapiens} PDB: 2pom_A 2pop_A Length = 401 Back     alignment and structure
>2pnq_A [pyruvate dehydrogenase [lipoamide]]-phosphatase 1; pyruvate dehydrogenase phosphatase 1, catalytic subunit, PDP1C, hydrolase; 1.81A {Rattus norvegicus} PDB: 3n3c_A 3mq3_A Length = 467 Back     alignment and structure
>2pk0_A Serine/threonine protein phosphatase STP1; SI motif, signaling protein; 2.65A {Streptococcus agalactiae} Length = 250 Back     alignment and structure
>1txo_A Putative bacterial enzyme; serine/threonine protein phosphatases, PSTP/PPP, structural genomics, PSI, protein structure initiative; 1.95A {Mycobacterium tuberculosis} SCOP: d.219.1.1 PDB: 2cm1_A Length = 237 Back     alignment and structure
>2jfr_A Ser-Thr phosphatase MSPP; hydrolase, PPM phosphatase, manganese, phosphate; 0.83A {Mycobacterium smegmatis} PDB: 2jfs_A 2jft_A 2v06_A Length = 234 Back     alignment and structure
>2j82_A TPPHA, protein serine-threonine phosphatase; PP2C family phosphatase, hydrolase; 1.28A {Synechococcus elongatus} PDB: 2j86_A 2y09_A 2xzv_A Length = 240 Back     alignment and structure
>3rnr_A Stage II sporulation E family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.00A {Thermanaerovibrio acidaminovorans} Length = 211 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query200
3qn1_B337 Protein phosphatase 2C 16; start domain, BET V dom 100.0
2iq1_A274 Protein phosphatase 2C kappa, PPM1K; structural ge 100.0
2p8e_A307 PPM1B beta isoform variant 6; structural genomics, 100.0
3kdj_B316 Protein phosphatase 2C 56; ABA, PYL1, abscisic aci 100.0
1a6q_A382 Phosphatase 2C; catalytic mechanism, metalloenzyme 100.0
2i0o_A304 Ser/Thr phosphatase; beta sandwich, structural gen 100.0
4da1_A389 Protein phosphatase 1K, mitochondrial; metal-ION-a 100.0
3d8k_A377 PP2C, protein phosphatase 2C; nysgrc, PSI-II, STR 100.0
2isn_A364 NYSGXRC-8828Z, phosphatase; pathogenic strain, pra 100.0
2j4o_A401 Mitogen-activated protein kinase kinase kinase 7-i 100.0
2irm_A358 Mitogen-activated protein kinase kinase kinase 7 i 100.0
2i44_A324 Serine-threonine phosphatase 2C; PSI-2, 8817Z, str 100.0
2pnq_A467 [pyruvate dehydrogenase [lipoamide]]-phosphatase 1 100.0
2pk0_A250 Serine/threonine protein phosphatase STP1; SI moti 100.0
2j82_A240 TPPHA, protein serine-threonine phosphatase; PP2C 100.0
1txo_A237 Putative bacterial enzyme; serine/threonine protei 100.0
2jfr_A234 Ser-Thr phosphatase MSPP; hydrolase, PPM phosphata 100.0
3rnr_A211 Stage II sporulation E family protein; structural 100.0
3t91_A242 Stage II sporulation protein E; SPOIIE, phosphatas 99.86
3pu9_A242 Protein serine/threonine phosphatase; PSI-biology, 99.83
3f79_A255 Probable two-component response regulator; adaptor 99.74
3zt9_A193 Serine phosphatase; hydrolase, signal transduction 99.68
3ke6_A 399 Protein RV1364C/MT1410; anti-sigma factor, anti-si 99.27
3eq2_A394 Probable two-component response regulator; adaptor 98.72
3c4z_A 543 Rhodopsin kinase; Ser/Thr kinase, RGS homology dom 81.8
>3qn1_B Protein phosphatase 2C 16; start domain, BET V domain, PYR/PYL/RCAR, PP2C, abscisic ACI receptor, type 2C protein phosphatase; HET: A8S; 1.80A {Arabidopsis thaliana} PDB: 3zvu_B* 3ujg_B 3nmt_B* 4ds8_B* 3rt0_A 3kb3_B* Back     alignment and structure
Probab=100.00  E-value=2.8e-43  Score=289.55  Aligned_cols=188  Identities=40%  Similarity=0.565  Sum_probs=172.0

Q ss_pred             cHHHHHHHHHHHHHHHHHhhh-------------cCCCCCCCceEEEEEEECCEEEEEEecCccEEEEeCCceeeCCCCC
Q 029027            3 DTKLAISETYQQTDVDFLESE-------------RDTYRDDGSTASTAILVGNHLYVANVGDSRTVISKAGKAIPLSEDH   69 (200)
Q Consensus         3 ~~~~~l~~a~~~~n~~i~~~~-------------~~~~~~~gtT~~~~~i~~~~~~~~~vGDSr~y~~r~g~~~~lt~dh   69 (200)
                      .++++|.++|..+|+.+....             ......||||++++++.++++|++||||||+|++|+|++.+||+||
T Consensus       111 ~~~~~l~~a~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~GtT~~~~~i~~~~l~~anvGDSR~~l~r~g~~~~lT~DH  190 (337)
T 3qn1_B          111 QWDKVFTSCFLTVDGEIEGKIGRAVVGSSDKVLEAVASETVGSTAVVALVCSSHIVVSNCGDSRAVLFRGKEAMPLSVDH  190 (337)
T ss_dssp             HHHHHHHHHHHHHHHHHHTSSCBCCTTCSSCBCCCSSCTTCEECEEEEEECSSEEEEEEESSCEEEEEETTEEEESCCCC
T ss_pred             HHHHHHHHHHHHhhHHHHhhhhccccccccccccccccCCCCceEEEEEEECCEEEEEeccCcEEEEEeCCEeeeecCCC
Confidence            577899999999999998654             2234579999999999999999999999999999999999999999


Q ss_pred             CCCChhHHHHHHHhCCeEEeCCceeeeceeecccccCCcccccccccCCceeEEEeecCceEEEEEcCCCcCCCChHHHH
Q 029027           70 KPNRCDERKRIENAGGVVMWAGTWRVGGVLAMSRAFGNRMLKQFVVAEPEIQDLEVDEGFELLVLASDGLWDVVPNEDAV  149 (200)
Q Consensus        70 ~~~~~~e~~~i~~~~g~~~~~~~~~~~~~~~~tr~lG~~~~~~~~~~~p~~~~~~l~~~~d~liL~SDGv~d~l~~~~i~  149 (200)
                      ++.++.|+.|+...+|.+......++++.+.+||+||+..+++.+.++|++..+.+.+.+|+||||||||||+++++++.
T Consensus       191 ~~~~~~e~~ri~~~gg~v~~~~~~r~~g~l~~sRalGd~~~~~~v~~~pdv~~~~~~~~~d~llL~SDGl~d~l~~~ei~  270 (337)
T 3qn1_B          191 KPDREDEYARIENAGGKVIQWQGARVFGVLAMSRSIGDRYLKPYVIPEPEVTFMPRSREDECLILASDGLWDVMNNQEVC  270 (337)
T ss_dssp             CTTSHHHHHHHHHTTCCEEESSSEEETTTBSCSBCEECGGGTTTSBCCCEEEEEECCTTEEEEEEECHHHHTTSCHHHHH
T ss_pred             CCCCHHHHHHHHHcCCeEEecCCceecCccccccccccccccCCCCCcceEEEEEeCCCCCEEEEEecCcccCCCHHHHH
Confidence            99999999999999999998888899999999999999999999999999999998666699999999999999999999


Q ss_pred             HHHHc---------------------CCCHHHHHHHHHHHHHhcCCCCceEEEEEEccCCCC
Q 029027          150 ALART---------------------GEEPEIAARKLTETAFTRGSADNITCIVVRFHHVNE  190 (200)
Q Consensus       150 ~i~~~---------------------~~~~~~~a~~l~~~a~~~g~~DN~T~ivi~~~~~~~  190 (200)
                      ++++.                     ..+++.+|+.|++.|+.+|+.||+|||||+|...+.
T Consensus       271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~Lv~~A~~~g~~DNiTvivv~l~~~~~  332 (337)
T 3qn1_B          271 EIARRRILMWHKKNGAPPLAERGKGIDPACQAAADYLSMLALQKGSKDNISIIVIDLKAQRK  332 (337)
T ss_dssp             HHHHHHHHHHHHHHCCC----CCSSCCHHHHHHHHHHHHHHHHTTCCSCEEEEEEECCSCC-
T ss_pred             HHHHHHhhhhccccccccccccccccChhHHHHHHHHHHHHHHcCCCCCEEEEEEEecCCcc
Confidence            99975                     346789999999999999999999999999987654
>2iq1_A Protein phosphatase 2C kappa, PPM1K; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.25A {Homo sapiens} Back     alignment and structure
>2p8e_A PPM1B beta isoform variant 6; structural genomics, hydrolase, PSI-2, protein structure initiative; 1.82A {Homo sapiens} Back     alignment and structure
>3kdj_B Protein phosphatase 2C 56; ABA, PYL1, abscisic acid signaling pathway, cell membr hydrolase, magnesium, manganese, metal-binding, nucleus; HET: A8S; 1.88A {Arabidopsis thaliana} PDB: 3nmn_B* 3jrq_A* 3ujk_A 3nmv_B 3ujl_B* Back     alignment and structure
>1a6q_A Phosphatase 2C; catalytic mechanism, metalloenzyme, transductuin, hydrolase; 2.00A {Homo sapiens} SCOP: a.159.1.1 d.219.1.1 PDB: 3fxk_A 3fxj_A 3fxl_A* 3fxm_A* 3fxo_A Back     alignment and structure
>2i0o_A Ser/Thr phosphatase; beta sandwich, structural genomics, PSI, protei structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Anopheles gambiae} Back     alignment and structure
>4da1_A Protein phosphatase 1K, mitochondrial; metal-ION-assisted catalysis, dehydrogenase phosphatase, hydrolase; 2.38A {Homo sapiens} PDB: 3qht_A 1l2n_A Back     alignment and structure
>3d8k_A PP2C, protein phosphatase 2C; nysgrc, PSI-II, STR genomics, protein structure initiative, NEW YORK structural research consortium, nysgxrc; 2.71A {Toxoplasma gondii} Back     alignment and structure
>2isn_A NYSGXRC-8828Z, phosphatase; pathogenic strain, praseodymium, sulfate structural genomics, PSI-2, protein structure initiative; 1.90A {Toxoplasma gondii} Back     alignment and structure
>2j4o_A Mitogen-activated protein kinase kinase kinase 7-interacting protein 1; TGF-beta, pseudo-phosphatase, TAK1 binding protein, protein binding; 2.25A {Homo sapiens} PDB: 2pom_A 2pop_A Back     alignment and structure
>2irm_A Mitogen-activated protein kinase kinase kinase 7 interacting protein 1; TAK1-binding protein, TAB1; 3.00A {Anopheles gambiae} Back     alignment and structure
>2i44_A Serine-threonine phosphatase 2C; PSI-2, 8817Z, structural genomics, protein structure initiative; 2.04A {Toxoplasma gondii} Back     alignment and structure
>2pnq_A [pyruvate dehydrogenase [lipoamide]]-phosphatase 1; pyruvate dehydrogenase phosphatase 1, catalytic subunit, PDP1C, hydrolase; 1.81A {Rattus norvegicus} PDB: 3n3c_A 3mq3_A Back     alignment and structure
>2pk0_A Serine/threonine protein phosphatase STP1; SI motif, signaling protein; 2.65A {Streptococcus agalactiae} Back     alignment and structure
>2j82_A TPPHA, protein serine-threonine phosphatase; PP2C family phosphatase, hydrolase; 1.28A {Synechococcus elongatus} PDB: 2j86_A 2y09_A 2xzv_A Back     alignment and structure
>1txo_A Putative bacterial enzyme; serine/threonine protein phosphatases, PSTP/PPP, structural genomics, PSI, protein structure initiative; 1.95A {Mycobacterium tuberculosis} SCOP: d.219.1.1 PDB: 2cm1_A Back     alignment and structure
>2jfr_A Ser-Thr phosphatase MSPP; hydrolase, PPM phosphatase, manganese, phosphate; 0.83A {Mycobacterium smegmatis} PDB: 2jfs_A 2jft_A 2v06_A Back     alignment and structure
>3rnr_A Stage II sporulation E family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.00A {Thermanaerovibrio acidaminovorans} Back     alignment and structure
>3t91_A Stage II sporulation protein E; SPOIIE, phosphatase, manganese binding, PP2C PH domain; HET: GL0 MAN; 2.64A {Bacillus subtilis} PDB: 3t9q_A* Back     alignment and structure
>3pu9_A Protein serine/threonine phosphatase; PSI-biology, MCSG, structural genomics; HET: MSE; 1.55A {Sphaerobacter thermophilus} Back     alignment and structure
>3f79_A Probable two-component response regulator; adaptor, signaling protein; 2.80A {Pseudomonas aeruginosa} PDB: 3es2_A Back     alignment and structure
>3zt9_A Serine phosphatase; hydrolase, signal transduction, protein protein interaction,; HET: PEG; 1.75A {Moorella thermoacetica} Back     alignment and structure
>3ke6_A Protein RV1364C/MT1410; anti-sigma factor, anti-sigma factor antagonist, phosphatase serine kinase, ATPase, unknown function; 2.60A {Mycobacterium tuberculosis} Back     alignment and structure
>3eq2_A Probable two-component response regulator; adaptor sigmas, signaling protein; 3.40A {Pseudomonas aeruginosa} PDB: 3f7a_A Back     alignment and structure
>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 200
d1a6qa2295 d.219.1.1 (A:2-296) Protein serine/threonine phosp 3e-34
d1txoa_235 d.219.1.1 (A:) putative serine/threonine phosphata 7e-21
>d1a6qa2 d.219.1.1 (A:2-296) Protein serine/threonine phosphatase 2C, catalytic domain {Human (Homo sapiens) [TaxId: 9606]} Length = 295 Back     information, alignment and structure

class: Alpha and beta proteins (a+b)
fold: PP2C-like
superfamily: PP2C-like
family: PP2C-like
domain: Protein serine/threonine phosphatase 2C, catalytic domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  120 bits (302), Expect = 3e-34
 Identities = 61/170 (35%), Positives = 93/170 (54%), Gaps = 17/170 (10%)

Query: 31  GSTASTAILVGNHLYVANVGDSRTVISKAGKAIPLSEDHKPNRCDERKRIENAGGVVMWA 90
           GSTA   ++   H Y  N GDSR ++ +  K    ++DHKP+   E++RI+NAGG VM  
Sbjct: 125 GSTAVGVLISPQHTYFINCGDSRGLLCRNRKVHFFTQDHKPSNPLEKERIQNAGGSVMI- 183

Query: 91  GTWRVGGVLAMSRAFGNRMLK---------QFVVAEPEIQDLEVD-EGFELLVLASDGLW 140
              RV G LA+SRA G+   K         Q V  EPE+ D+E   E  + ++LA DG+W
Sbjct: 184 --QRVNGSLAVSRALGDFDYKCVHGKGPTEQLVSPEPEVHDIERSEEDDQFIILACDGIW 241

Query: 141 DVVPNEDAVALART----GEEPEIAARKLTETAFTRGSADNITCIVVRFH 186
           DV+ NE+     R+     ++ E    ++ +T   +GS DN++ I++ F 
Sbjct: 242 DVMGNEELCDFVRSRLEVTDDLEKVCNEVVDTCLYKGSRDNMSVILICFP 291
>d1txoa_ d.219.1.1 (A:) putative serine/threonine phosphatase pstp/ppp {Mycobacterium tuberculosis [TaxId: 1773]} Length = 235 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query200
d1a6qa2295 Protein serine/threonine phosphatase 2C, catalytic 100.0
d1txoa_235 putative serine/threonine phosphatase pstp/ppp {My 100.0
>d1a6qa2 d.219.1.1 (A:2-296) Protein serine/threonine phosphatase 2C, catalytic domain {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
class: Alpha and beta proteins (a+b)
fold: PP2C-like
superfamily: PP2C-like
family: PP2C-like
domain: Protein serine/threonine phosphatase 2C, catalytic domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.7e-42  Score=278.21  Aligned_cols=184  Identities=35%  Similarity=0.575  Sum_probs=165.7

Q ss_pred             cHHHHHHHHHHHHHHHHHhh--hcCCCCCCCceEEEEEEECCEEEEEEecCccEEEEeCCceeeCCCCCCCCChhHHHHH
Q 029027            3 DTKLAISETYQQTDVDFLES--ERDTYRDDGSTASTAILVGNHLYVANVGDSRTVISKAGKAIPLSEDHKPNRCDERKRI   80 (200)
Q Consensus         3 ~~~~~l~~a~~~~n~~i~~~--~~~~~~~~gtT~~~~~i~~~~~~~~~vGDSr~y~~r~g~~~~lt~dh~~~~~~e~~~i   80 (200)
                      ++.++|.++|..+++.+...  .......+|||++++++.++++|++||||||+|++|++++.+||.||++.++.|++|+
T Consensus        95 ~~~~al~~a~~~~~~~~~~~~~~~~~~~~~GtTa~~~~i~~~~l~vanvGDSR~~l~~~~~~~~lT~dH~~~~~~E~~Ri  174 (295)
T d1a6qa2          95 NVKNGIRTGFLEIDEHMRVMSEKKHGADRSGSTAVGVLISPQHTYFINCGDSRGLLCRNRKVHFFTQDHKPSNPLEKERI  174 (295)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHTTCCCCCEECEEEEEECSSEEEEEEESSCEEEEEETTEEEEECCCCCTTSHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhhhhhhccCcCCCCCeEEEEEeeCCEEEEEecCCCeEEEeecccceeeccccCcccHHHHhhH
Confidence            57889999999999988765  4455667999999999999999999999999999999999999999999999999999


Q ss_pred             HHhCCeEEeCCceeeeceeecccccCCcccc---------cccccCCceeEEEeec-CceEEEEEcCCCcCCCChHHHHH
Q 029027           81 ENAGGVVMWAGTWRVGGVLAMSRAFGNRMLK---------QFVVAEPEIQDLEVDE-GFELLVLASDGLWDVVPNEDAVA  150 (200)
Q Consensus        81 ~~~~g~~~~~~~~~~~~~~~~tr~lG~~~~~---------~~~~~~p~~~~~~l~~-~~d~liL~SDGv~d~l~~~~i~~  150 (200)
                      ...||.+.   ..+.++.+.+||+||+..+|         +.+++.|++..+.+.. +++|||||||||||+|+++++.+
T Consensus       175 ~~~gg~v~---~~r~~g~l~~tRa~Gd~~~k~~~~~~~~~~~v~~~Pdi~~~~~~~~~~~flvL~SDGl~d~l~~~ei~~  251 (295)
T d1a6qa2         175 QNAGGSVM---IQRVNGSLAVSRALGDFDYKCVHGKGPTEQLVSPEPEVHDIERSEEDDQFIILACDGIWDVMGNEELCD  251 (295)
T ss_dssp             HHTTCCEE---TTEETTTBSCSBCEECGGGSCCTTCCGGGSSSBCCCEEEEEECCTTTEEEEEEECHHHHTTSCHHHHHH
T ss_pred             hhcCCccc---ccccCCceeeeeccCcHHhhhccccCcccccccccccceEEEeecccceeEeeecCcccccCCHHHHHH
Confidence            99999987   44778889999999999887         3488899999998863 45699999999999999999999


Q ss_pred             HHHc----CCCHHHHHHHHHHHHHhcCCCCceEEEEEEccCCC
Q 029027          151 LART----GEEPEIAARKLTETAFTRGSADNITCIVVRFHHVN  189 (200)
Q Consensus       151 i~~~----~~~~~~~a~~l~~~a~~~g~~DN~T~ivi~~~~~~  189 (200)
                      +++.    ..+++.+|+.|++.|+.+|+.||+|||||+|...+
T Consensus       252 ~v~~~~~~~~~~~~~a~~Lv~~A~~~gs~DNiTvivv~~~~~~  294 (295)
T d1a6qa2         252 FVRSRLEVTDDLEKVCNEVVDTCLYKGSRDNMSVILICFPNAP  294 (295)
T ss_dssp             HHHHHHTTCCCHHHHHHHHHHHHHHTTCCSCEEEEEEECTTSC
T ss_pred             HHHHHhhcCCCHHHHHHHHHHHHHhcCCCCCeEEEEEeccCCC
Confidence            9865    57899999999999999999999999999998654
>d1txoa_ d.219.1.1 (A:) putative serine/threonine phosphatase pstp/ppp {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure