Citrus Sinensis ID: 029120

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------20
Protein Sequence
MTSVRNNLMPPGLVSNLEQVLLNKKKKSKDNDDDGDDGTSKQSNEEANESTEPSTSDSTENVDSSKPVLLVTNGDGIESPGLVYLVEALVREGLYNVHVCAPQSDKSVSGHSVTLRETIAVSSAEINGATAYEVSGTPVDCVSLALSGALFSWSKPLLVISGINRGSSCGHHMCCCRSQRGINLWCTFSVHIPKLEER
Secondary Structure (PSIPRED)
ccccccccccHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccEEEEEcccccccHHHHHHHHHHHHcccccEEEEccccccccccccccccccEEEEEEEccccEEEEEcccHHHHHHHHHHccccccccccEEEEccccccccccccHHHHHHHHHHHHHHHcccccccccc
Secondary Structure Prediction (SSPRO)
ccccccccccHHHHHHHHHHHHHcccccccccccccccccHccccccccccccccccccHcccccccEEEEEccccccHHHHHHHHHHHHHccccEEEEEccccccccccccEEccccEEEEEEEcccccEEEEccccHHHHHHHHHHHHcccccccEEEEEEccccccccccEEcHHHccccEEEEEEEcccccccc
Coil and Loop (DISEMBL)
mtsvrnnlmppglvsNLEQVLLNKkkkskdndddgddgtskqsneeanestepstsdstenvdsskpvllvtngdgiespgLVYLVEALVREGlynvhvcapqsdksvsghsvTLRETIAVSSAeingatayevsgtpvdCVSLALSGalfswskpllvisginrgsscghhmcccrsqrginlwctfsvhipkleer
Flexible Loop (DISEMBL)
mtsvrnnlmppglvsNLEQVLLNKkkkskdndddgddgtskqsneeanestepstsdstenvdssKPVLLVtngdgiesPGLVYLVEALVREGLYNVHVCapqsdksvsghsVTLRETIAVSSAEINGATAYEVSGTPVDCVSLALSGALFSWSKPLLVISGINRGSSCGHHMCCCRSQRGINLWCTFSvhipkleer
Low Complexity Region (SEG)
MTSVRNNLMPPGLVSNLEQVLLnkkkkskdndddgddgtskQSNEEANestepstsdsteNVDSSKPVLLVTNGDGIESPGLVYLVEALVREGLYNVHVCAPQSDKSVSGHSVTLRETIAVSSAEINGATAYEVSGTPVDCVSLALSGALFSWSKPLLVISGINRGSSCGHHMCCCRSQRGINLWCTFSVHIPKLEER
Disordered region (IsUnstruct)
*******************************************************************VLLVTNGDGIESPGLVYLVEALVREGLYNVHVCAPQ******GHSVTLRETIAVSSAEINGATAYEVSGTPVDCVSLALSGALFSWSKPLLVISGINRGSSCGHHMCCCRSQRGINLWCTFSVHI******
Disordered Region (DISOPRED)
*********PPGLVSNLE*************************************************VLLVTNGDGIESPGLVYLVEALVREGLYNVHVCAPQSDKSVSGHSVTLRETIAVSSAEINGATAYEVSGTPVDCVSLALSGALFSWSKPLLVISGINRGSSCGHHMCCCRSQRGINLWCTFSVHIPKLE**
Disordered Region (DISEMBL)
MTSVRNNLMPPGLVSNLEQVLLNKK***************************************SKPVLLVTNGDGIESPGLVYLVEALVREGLYNVHVCAPQS*********TLRETIAVSSAEINGATAYEVSGTPVDCVSLALSGALFSWSKPLLVISGINRGSSCGHHMCCCRSQRGINLWCTFSVHIPKLEER
Disordered Region (DISPRO)
*****NNLMPPGLVSNLEQVLLNK***************************************SSKPVLLVTNGDGIESPGLVYLVEALVREGLYNVHVCAPQSDKSVSGHSVTLRETIAVSSAEINGATAYEVSGTPVDCVSLALSGALFSWSKPLLVISGINRGSSCGHHMCCCRSQRGINLWCTFSVHIPKL***
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
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TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MTSVRNNLMPPGLVSNLEQVLLNKKKKSKDNDDDGDDGTSKQSNEEANESTEPSTSDSTENVDSSKPVLLVTNGDGIESPGLVYLVEALVREGLYNVHVCAPQSDKSVSGHSVTLRETIAVSSAEINGATAYEVSGTPVDCVSLALSGALFSWSKPLLVISGINRGSSCGHHMCCCRSQRGINLWCTFSVHIPKLEER
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	198	2.2.26 [Sep-21-2011]
Q24WI0	251	5'-nucleotidase SurE OS=D	yes	no	0.5	0.394	0.460	2e-17
B8FYS8	251	5'-nucleotidase SurE OS=D	yes	no	0.5	0.394	0.460	2e-17
Q823A7	283	5'-nucleotidase SurE 2 OS	no	no	0.525	0.367	0.401	1e-15
C6BUG4	251	5'-nucleotidase SurE OS=D	yes	no	0.5	0.394	0.450	1e-14
A6H213	257	5'-nucleotidase SurE OS=F	yes	no	0.505	0.389	0.452	2e-14
Q6MCW1	261	5'-nucleotidase SurE OS=P	yes	no	0.540	0.409	0.371	9e-14
A1VY14	258	5'-nucleotidase SurE OS=C	yes	no	0.510	0.391	0.415	1e-13
Q5HWH7	258	5'-nucleotidase SurE OS=C	yes	no	0.510	0.391	0.415	1e-13
Q9PIK6	258	5'-nucleotidase SurE OS=C	yes	no	0.510	0.391	0.415	1e-13
A8FK82	258	5'-nucleotidase SurE OS=C	yes	no	0.510	0.391	0.415	1e-13

>sp|Q24WI0|SURE_DESHY 5'-nucleotidase SurE OS=Desulfitobacterium hafniense (strain Y51) GN=surE PE=3 SV=1

 Score = 88.6 bits (218), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 47/102 (46%), Positives = 63/102 (61%), Gaps = 3/102 (2%)

Query: 69  LLVTNGDGIESPGLVYLVEALVREGLYNVHVCAPQSDKSVSGHSVTLRETIAVSSAEING 128
           +L+TN DG  +PGL  L   L   G Y+V + AP S KS +GHS+TL E + ++   ++ 
Sbjct: 3   ILLTNDDGYFAPGLQTLYTTLAEAG-YDVFIVAPDSQKSATGHSITLFEPLFITKHSLDR 61

Query: 129 ATAYEVSGTPVDCVSLALSGALFSWSKPLLVISGINRGSSCG 170
            T Y VSG P DCV LA+ G++    KP LVISGIN G + G
Sbjct: 62  GTGYAVSGKPADCVKLAIQGSII--PKPDLVISGINNGPNLG 101

Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates.
Desulfitobacterium hafniense (strain Y51) (taxid: 138119)
EC: 3EC: .EC: 1EC: .EC: 3EC: .EC: 5

>sp|B8FYS8|SURE_DESHD 5'-nucleotidase SurE OS=Desulfitobacterium hafniense (strain DCB-2 / DSM 10664) GN=surE PE=3 SV=1

 Score = 88.6 bits (218), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 47/102 (46%), Positives = 63/102 (61%), Gaps = 3/102 (2%)

Query: 69  LLVTNGDGIESPGLVYLVEALVREGLYNVHVCAPQSDKSVSGHSVTLRETIAVSSAEING 128
           +L+TN DG  +PGL  L   L   G Y+V + AP S KS +GHS+TL E + ++   ++ 
Sbjct: 3   ILLTNDDGYFAPGLQTLYTTLAEAG-YDVFIVAPDSQKSATGHSITLFEPLFITKHSLDR 61

Query: 129 ATAYEVSGTPVDCVSLALSGALFSWSKPLLVISGINRGSSCG 170
            T Y VSG P DCV LA+ G++    KP LVISGIN G + G
Sbjct: 62  GTGYAVSGKPADCVKLAIQGSII--PKPDLVISGINNGPNLG 101

Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates.

Desulfitobacterium hafniense (strain DCB-2 / DSM 10664) (taxid: 272564)

EC: 3

EC: .

EC: 1

EC: .

EC: 3

EC: .

EC: 5

>sp|Q823A7|SURE2_CHLCV 5'-nucleotidase SurE 2 OS=Chlamydophila caviae (strain GPIC) GN=surE2 PE=3 SV=2

 Score = 82.8 bits (203), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 43/107 (40%), Positives = 69/107 (64%), Gaps = 3/107 (2%)

Query: 69  LLVTNGDGIESPGLVYLVEALVREGLYNVHVCAPQSDKSVSGHSVTLRETIAVSSAE--I 126
           +L+TN DGI +PG+  LV  L++    ++++ AP++++S    ++T  E + +   +  +
Sbjct: 14  ILLTNDDGIFAPGMTLLVSNLLKADFADLYIVAPKTEQSAKSMAMTFHEPVILQPYDYPL 73

Query: 127 NGATAYEVSGTPVDCVSLALSGALFSWSKPLLVISGINRGSSCGHHM 173
             A A+ VSGTPVDCV +AL+  LF    P LV+SGINRGS+ G H+
Sbjct: 74  PVAGAWSVSGTPVDCVRIALA-YLFKDELPDLVLSGINRGSNAGRHV 119

Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates.

Chlamydophila caviae (strain GPIC) (taxid: 227941)

EC: 3

EC: .

EC: 1

EC: .

EC: 3

EC: .

EC: 5

>sp|C6BUG4|SURE_DESAD 5'-nucleotidase SurE OS=Desulfovibrio salexigens (strain ATCC 14822 / DSM 2638 / NCIB 8403 / VKM B-1763) GN=surE PE=3 SV=1

 Score = 79.7 bits (195), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 46/102 (45%), Positives = 64/102 (62%), Gaps = 3/102 (2%)

Query: 69  LLVTNGDGIESPGLVYLVEALVREGLYNVHVCAPQSDKSVSGHSVTLRETIAVSSAEING 128
           +L+TN DGI++ GL  L   L R G+ NV V AP +++S  GH+V+L   + V   E +G
Sbjct: 3   ILLTNDDGIQAVGLRALYHGLKRAGM-NVQVVAPVAEQSAVGHAVSLSSPLRVKKFEEDG 61

Query: 129 ATAYEVSGTPVDCVSLALSGALFSWSKPLLVISGINRGSSCG 170
            T   V GTPVDCV L L+  L   +KP +V+SGIN G++ G
Sbjct: 62  FTGLGVYGTPVDCVKLGLTTLLE--TKPDIVVSGINSGANVG 101

Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates.

Desulfovibrio salexigens (strain ATCC 14822 / DSM 2638 / NCIB 8403 / VKM B-1763) (taxid: 526222)

EC: 3

EC: .

EC: 1

EC: .

EC: 3

EC: .

EC: 5

>sp|A6H213|SURE_FLAPJ 5'-nucleotidase SurE OS=Flavobacterium psychrophilum (strain JIP02/86 / ATCC 49511) GN=surE PE=3 SV=1

 Score = 79.0 bits (193), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 48/106 (45%), Positives = 66/106 (62%), Gaps = 6/106 (5%)

Query: 65  SKPVLLVTNGDGIESPGLVYLVEALVREGLYNVHVCAPQSDKSVSGHSVTLRETIAVS-- 122
           SKP++LVTN DGI +PG+  L+  +   G   V V AP S +S  GH++T+  T+ ++  
Sbjct: 2   SKPLILVTNDDGISAPGIRSLIAVMQEIG--TVVVVAPDSPQSAMGHAITINSTLHLNKI 59

Query: 123 SAEINGATAYEVSGTPVDCVSLALSGALFSWSKPLLVISGINRGSS 168
           SAE    T Y  SGTPVDCV LA++  L    KP L +SG+N GS+
Sbjct: 60  SAENAAVTEYSCSGTPVDCVKLAVNEILK--QKPDLCVSGVNHGSN 103

Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates.

Flavobacterium psychrophilum (strain JIP02/86 / ATCC 49511) (taxid: 402612)

EC: 3

EC: .

EC: 1

EC: .

EC: 3

EC: .

EC: 5

>sp|Q6MCW1|SURE_PARUW 5'-nucleotidase SurE OS=Protochlamydia amoebophila (strain UWE25) GN=surE PE=3 SV=1

 Score = 76.6 bits (187), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 42/113 (37%), Positives = 72/113 (63%), Gaps = 6/113 (5%)

Query: 64  SSKPVLLVTNGDGIESPGLVYLVEALVREGLYNVHVCAPQSDKSVSGHSVTLRETIAVSS 123
           SSKP++LVTN DG+ + G+ +L +++  + L ++ + APQ ++S    S+T+R  + +  
Sbjct: 2   SSKPLILVTNDDGVHAKGIRHLWQSI--QDLADLIIVAPQQEQSAVSLSITVRRPLHIEK 59

Query: 124 AEINGATA--YEVSGTPVDCVSLALSGALFSWSKPLLVISGINRGSSCGHHMC 174
            +   A A  + V+GTP DCV LAL+  L    +P L++SGINRG++ G ++ 
Sbjct: 60  VDWLNAQADVWSVNGTPADCVKLALNVVLP--KRPQLIVSGINRGTNAGRNIF 110

Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates.

Protochlamydia amoebophila (strain UWE25) (taxid: 264201)

EC: 3

EC: .

EC: 1

EC: .

EC: 3

EC: .

EC: 5

>sp|A1VY14|SURE_CAMJJ 5'-nucleotidase SurE OS=Campylobacter jejuni subsp. jejuni serotype O:23/36 (strain 81-176) GN=surE PE=3 SV=1

 Score = 76.6 bits (187), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 44/106 (41%), Positives = 62/106 (58%), Gaps = 5/106 (4%)

Query: 69  LLVTNGDGIESPGLVYLVEALVREGLYNVHVCAPQSDKSVSGHSVTLRETIAVSSAEING 128
           +L+TN DG ES GL  L++ L +E    + + AP S+KS   HS+TL + +        G
Sbjct: 4   ILITNDDGYESEGLKKLIKMLTKEFKAKITIVAPASEKSACSHSITLTKPLRFVKV---G 60

Query: 129 ATAYEV-SGTPVDCVSLALSGALFSWSKPLLVISGINRGSSCGHHM 173
              Y++  GTP DCV LAL  AL+    P LVISGIN+G++ G  +
Sbjct: 61  KRFYKLDDGTPADCVYLALH-ALYKKRLPDLVISGINKGANVGEDI 105

Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates.

Campylobacter jejuni subsp. jejuni serotype O:23/36 (strain 81-176) (taxid: 354242)

EC: 3

EC: .

EC: 1

EC: .

EC: 3

EC: .

EC: 5

>sp|Q5HWH7|SURE_CAMJR 5'-nucleotidase SurE OS=Campylobacter jejuni (strain RM1221) GN=surE PE=3 SV=1

 Score = 76.6 bits (187), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 44/106 (41%), Positives = 62/106 (58%), Gaps = 5/106 (4%)

Query: 69  LLVTNGDGIESPGLVYLVEALVREGLYNVHVCAPQSDKSVSGHSVTLRETIAVSSAEING 128
           +L+TN DG ES GL  L++ L +E    + + AP S+KS   HS+TL + +        G
Sbjct: 4   ILITNDDGYESEGLKKLIKMLTKEFKAKITIVAPASEKSACSHSITLTKPLRFVKV---G 60

Query: 129 ATAYEV-SGTPVDCVSLALSGALFSWSKPLLVISGINRGSSCGHHM 173
              Y++  GTP DCV LAL  AL+    P LVISGIN+G++ G  +
Sbjct: 61  KRFYKLDDGTPADCVYLALH-ALYKKRLPDLVISGINKGANVGEDI 105

Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates.

Campylobacter jejuni (strain RM1221) (taxid: 195099)

EC: 3

EC: .

EC: 1

EC: .

EC: 3

EC: .

EC: 5

>sp|Q9PIK6|SURE_CAMJE 5'-nucleotidase SurE OS=Campylobacter jejuni subsp. jejuni serotype O:2 (strain NCTC 11168) GN=surE PE=3 SV=1

 Score = 76.6 bits (187), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 44/106 (41%), Positives = 62/106 (58%), Gaps = 5/106 (4%)

Query: 69  LLVTNGDGIESPGLVYLVEALVREGLYNVHVCAPQSDKSVSGHSVTLRETIAVSSAEING 128
           +L+TN DG ES GL  L++ L +E    + + AP S+KS   HS+TL + +        G
Sbjct: 4   ILITNDDGYESEGLKKLIKMLTKEFKAKITIVAPASEKSACSHSITLTKPLRFVKV---G 60

Query: 129 ATAYEV-SGTPVDCVSLALSGALFSWSKPLLVISGINRGSSCGHHM 173
              Y++  GTP DCV LAL  AL+    P LVISGIN+G++ G  +
Sbjct: 61  KRFYKLDDGTPADCVYLALH-ALYKKRLPDLVISGINKGANVGEDI 105

Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates.

Campylobacter jejuni subsp. jejuni serotype O:2 (strain NCTC 11168) (taxid: 192222)

EC: 3

EC: .

EC: 1

EC: .

EC: 3

EC: .

EC: 5

>sp|A8FK82|SURE_CAMJ8 5'-nucleotidase SurE OS=Campylobacter jejuni subsp. jejuni serotype O:6 (strain 81116 / NCTC 11828) GN=surE PE=3 SV=1

 Score = 76.3 bits (186), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 44/106 (41%), Positives = 62/106 (58%), Gaps = 5/106 (4%)

Query: 69  LLVTNGDGIESPGLVYLVEALVREGLYNVHVCAPQSDKSVSGHSVTLRETIAVSSAEING 128
           +L+TN DG ES GL  L++ L +E    + + AP S+KS   HS+TL + +        G
Sbjct: 4   ILITNDDGYESEGLKKLIKMLTKEFKAKITIVAPASEKSACSHSITLTKPLRFVKV---G 60

Query: 129 ATAYEV-SGTPVDCVSLALSGALFSWSKPLLVISGINRGSSCGHHM 173
              Y++  GTP DCV LAL  AL+    P LVISGIN+G++ G  +
Sbjct: 61  KRFYKLDDGTPADCVYLALH-ALYKKRLPDLVISGINKGANVGEDI 105

Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates.

Campylobacter jejuni subsp. jejuni serotype O:6 (strain 81116 / NCTC 11828) (taxid: 407148)

EC: 3

EC: .

EC: 1

EC: .

EC: 3

EC: .

EC: 5

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	198
225442198	384	PREDICTED: 5'-nucleotidase surE [Vitis v	0.813	0.419	0.731	5e-65
224134587	390	predicted protein [Populus trichocarpa]	0.848	0.430	0.707	5e-61
118484339	394	unknown [Populus trichocarpa]	0.818	0.411	0.688	1e-60
449458159	388	PREDICTED: 5'-nucleotidase SurE-like [Cu	0.823	0.420	0.708	4e-60
307135867	388	acid phosphatase [Cucumis melo subsp. me	0.823	0.420	0.702	1e-59
356556819	372	PREDICTED: 5'-nucleotidase surE-like [Gl	0.762	0.405	0.690	7e-59
224128690	386	predicted protein [Populus trichocarpa]	0.782	0.401	0.691	1e-58
359807197	375	uncharacterized protein LOC100779772 [Gl	0.787	0.416	0.668	3e-56
357454581	377	5'-nucleotidase surE [Medicago truncatul	0.792	0.416	0.644	1e-53
255560747	398	acid phosphatase, putative [Ricinus comm	0.767	0.381	0.693	2e-52

>gi|225442198|ref|XP_002276942.1| PREDICTED: 5'-nucleotidase surE [Vitis vinifera] gi|297743037|emb|CBI35904.3| unnamed protein product [Vitis vinifera]

 Score =  252 bits (644), Expect = 5e-65,   Method: Compositional matrix adjust.
 Identities = 128/175 (73%), Positives = 148/175 (84%), Gaps = 14/175 (8%)

Query: 2   TSVRNNLMPPGLVSNLEQVLLNKKKKSKDNDDDGDDGTSKQSNEEANESTEPSTSDSTE- 60
           TSV+NN +PPGLVSNL++VLLN+K  S+++    +D           EST+PS+SD+ E 
Sbjct: 3   TSVKNNFLPPGLVSNLQEVLLNRKGGSENDPSKSND-----------ESTQPSSSDAVEA 51

Query: 61  --NVDSSKPVLLVTNGDGIESPGLVYLVEALVREGLYNVHVCAPQSDKSVSGHSVTLRET 118
             + + SKPV+LVTN DGIE+PGL +LVEALVR+GL NVHVCAPQSDKSVSGHSVTLRET
Sbjct: 52  NSDTECSKPVVLVTNADGIEAPGLNFLVEALVRDGLCNVHVCAPQSDKSVSGHSVTLRET 111

Query: 119 IAVSSAEINGATAYEVSGTPVDCVSLALSGALFSWSKPLLVISGINRGSSCGHHM 173
           +AV+SAEINGATAYEVSGTPVDCVSLALSGALFSWSKPLLVISGINRGSSCGHHM
Sbjct: 112 VAVTSAEINGATAYEVSGTPVDCVSLALSGALFSWSKPLLVISGINRGSSCGHHM 166

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224134587|ref|XP_002327441.1| predicted protein [Populus trichocarpa] gi|222835995|gb|EEE74416.1| predicted protein [Populus trichocarpa]

 Score =  239 bits (610), Expect = 5e-61,   Method: Compositional matrix adjust.
 Identities = 126/178 (70%), Positives = 148/178 (83%), Gaps = 10/178 (5%)

Query: 1   MTSVRNNLMPPGLVSNLEQVLLNKKKKSKDNDDDGDDGTSKQSNEEANESTEPSTS---- 56
           MTSV+NNL+PPGLVSNL+QVLL++K      +   D      SN++ ++STE STS    
Sbjct: 1   MTSVKNNLLPPGLVSNLQQVLLSRKGGGGGEEKGSD-----LSNDDNDQSTESSTSACVE 55

Query: 57  -DSTENVDSSKPVLLVTNGDGIESPGLVYLVEALVREGLYNVHVCAPQSDKSVSGHSVTL 115
               E+ ++SKPV+LVTNGDGI+SPGL++LVEALVREGL NVHVCAPQSDKSVS HSVTL
Sbjct: 56  NTEEEDNNNSKPVVLVTNGDGIDSPGLLFLVEALVREGLCNVHVCAPQSDKSVSSHSVTL 115

Query: 116 RETIAVSSAEINGATAYEVSGTPVDCVSLALSGALFSWSKPLLVISGINRGSSCGHHM 173
           +ETIA +SAEINGA AYE+SGTPVDCVSLALSGALFSWSKPLLVISGINRGS+CG+HM
Sbjct: 116 QETIAATSAEINGAVAYEISGTPVDCVSLALSGALFSWSKPLLVISGINRGSNCGYHM 173

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|118484339|gb|ABK94047.1| unknown [Populus trichocarpa]

 Score =  238 bits (607), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 128/186 (68%), Positives = 145/186 (77%), Gaps = 24/186 (12%)

Query: 1   MTSVRNN-LMPPGLVSNLEQVLLNKKKKSK--------DNDDDGDDGTSKQSNEEANEST 51
           MTSV+NN ++PPGLVSNL+QVLL++K            D  +DG+D           +S 
Sbjct: 1   MTSVKNNNMLPPGLVSNLQQVLLSRKGGGGEEEEKKEIDPSNDGND-----------KSA 49

Query: 52  EPSTSDSTENVD----SSKPVLLVTNGDGIESPGLVYLVEALVREGLYNVHVCAPQSDKS 107
           EPST+   EN +    +SKP++LVTNGDGI+SPGLV LVEALVREGLYNVHVCAPQSDKS
Sbjct: 50  EPSTTTCVENTEEDSNNSKPIVLVTNGDGIDSPGLVSLVEALVREGLYNVHVCAPQSDKS 109

Query: 108 VSGHSVTLRETIAVSSAEINGATAYEVSGTPVDCVSLALSGALFSWSKPLLVISGINRGS 167
           VS HSVTL E IAV+S EINGA AYEVSGTPVDCVSLALSGALFSWSKPLLVISGINRGS
Sbjct: 110 VSSHSVTLHEAIAVTSVEINGAIAYEVSGTPVDCVSLALSGALFSWSKPLLVISGINRGS 169

Query: 168 SCGHHM 173
           +CGHHM
Sbjct: 170 NCGHHM 175

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449458159|ref|XP_004146815.1| PREDICTED: 5'-nucleotidase SurE-like [Cucumis sativus] gi|449476647|ref|XP_004154795.1| PREDICTED: 5'-nucleotidase SurE-like [Cucumis sativus]

 Score =  236 bits (602), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 124/175 (70%), Positives = 138/175 (78%), Gaps = 12/175 (6%)

Query: 2   TSVRNNLMPPGLVSNLEQVLLNKKKKSKDNDDDGDDGTSKQSNEEANESTEPSTSDSTEN 61
           TSV+ N +PPGLVSNLE VL ++K         G     ++S +  N S  PS+S S  N
Sbjct: 5   TSVKKNFLPPGLVSNLEDVLRSRK---------GPGERGEESKDVNNASPHPSSSTSDAN 55

Query: 62  VDSS---KPVLLVTNGDGIESPGLVYLVEALVREGLYNVHVCAPQSDKSVSGHSVTLRET 118
           ++ S   KPV+LVTN +GI+SPGL YLVE LVREG YNVHVCAPQSDKSVS HSVTLRET
Sbjct: 56  LEVSATQKPVILVTNSEGIDSPGLTYLVEGLVREGSYNVHVCAPQSDKSVSSHSVTLRET 115

Query: 119 IAVSSAEINGATAYEVSGTPVDCVSLALSGALFSWSKPLLVISGINRGSSCGHHM 173
           +AVSSAEINGATAYEVSGTPVDCVSLALSGALFSWSKPLLVISGINRGSSCGH M
Sbjct: 116 VAVSSAEINGATAYEVSGTPVDCVSLALSGALFSWSKPLLVISGINRGSSCGHQM 170

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|307135867|gb|ADN33735.1| acid phosphatase [Cucumis melo subsp. melo]

 Score =  234 bits (597), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 123/175 (70%), Positives = 137/175 (78%), Gaps = 12/175 (6%)

Query: 2   TSVRNNLMPPGLVSNLEQVLLNKKKKSKDNDDDGDDGTSKQSNEEANESTEPSTSDSTEN 61
           TSV+ N +PPGLVSNLE VL ++K         G     ++S +  N S  PS+S S  N
Sbjct: 5   TSVKKNFLPPGLVSNLEDVLRSRK---------GPGERGEESKDVNNASPHPSSSTSDAN 55

Query: 62  VDSS---KPVLLVTNGDGIESPGLVYLVEALVREGLYNVHVCAPQSDKSVSGHSVTLRET 118
           ++ S   KPV+LVTN +GI+SPGL YLVE LVREG YNVHVCAPQSDKSVS HSVTLRET
Sbjct: 56  LEVSATQKPVILVTNSEGIDSPGLTYLVEGLVREGSYNVHVCAPQSDKSVSSHSVTLRET 115

Query: 119 IAVSSAEINGATAYEVSGTPVDCVSLALSGALFSWSKPLLVISGINRGSSCGHHM 173
           +AVSSAEING TAYEVSGTPVDCVSLALSGALFSWSKPLLVISGINRGSSCGH M
Sbjct: 116 VAVSSAEINGVTAYEVSGTPVDCVSLALSGALFSWSKPLLVISGINRGSSCGHQM 170

Source: Cucumis melo subsp. melo

Species: Cucumis melo

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356556819|ref|XP_003546718.1| PREDICTED: 5'-nucleotidase surE-like [Glycine max]

 Score =  232 bits (591), Expect = 7e-59,   Method: Compositional matrix adjust.
 Identities = 116/168 (69%), Positives = 139/168 (82%), Gaps = 17/168 (10%)

Query: 8   LMPPGLVSNLEQVLLNKKKKSKDNDDDGDDGTSKQSNEEANESTEPSTSDSTENV--DSS 65
           +MPPG VSNL++VLLN+K         GD      SN  +N   E S+S+++E V  D+S
Sbjct: 1   MMPPGFVSNLQEVLLNRK---------GD------SNSNSNAEQEQSSSENSEPVEFDAS 45

Query: 66  KPVLLVTNGDGIESPGLVYLVEALVREGLYNVHVCAPQSDKSVSGHSVTLRETIAVSSAE 125
           KP++LVTNGDG++SPGL +LVEALV++GLYNVHVC PQSDKSVSGHSVTLRETI  +SA+
Sbjct: 46  KPIVLVTNGDGVDSPGLTHLVEALVQQGLYNVHVCVPQSDKSVSGHSVTLRETIEAASAK 105

Query: 126 INGATAYEVSGTPVDCVSLALSGALFSWSKPLLVISGINRGSSCGHHM 173
           INGATA+E+SGTPVDCVSLALSGALFSWSKP+LVISGINRGS+CGHHM
Sbjct: 106 INGATAFEISGTPVDCVSLALSGALFSWSKPMLVISGINRGSNCGHHM 153

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224128690|ref|XP_002329066.1| predicted protein [Populus trichocarpa] gi|222839737|gb|EEE78060.1| predicted protein [Populus trichocarpa]

 Score =  231 bits (588), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 123/178 (69%), Positives = 138/178 (77%), Gaps = 23/178 (12%)

Query: 8   LMPPGLVSNLEQVLLNKKKKSK--------DNDDDGDDGTSKQSNEEANESTEPSTSDST 59
           ++PPGLVSNL+QVLL++K            D  +DG+D           +S EPSTS   
Sbjct: 1   MLPPGLVSNLQQVLLSRKGGGGEEEEKKEIDPSNDGND-----------KSAEPSTSTCV 49

Query: 60  ENVD----SSKPVLLVTNGDGIESPGLVYLVEALVREGLYNVHVCAPQSDKSVSGHSVTL 115
           EN +    +SKP++LVTNGDGI+SPGLV LVEALVREGLYNVHVCAPQSDKSVS HSVTL
Sbjct: 50  ENTEEDSNNSKPIVLVTNGDGIDSPGLVSLVEALVREGLYNVHVCAPQSDKSVSSHSVTL 109

Query: 116 RETIAVSSAEINGATAYEVSGTPVDCVSLALSGALFSWSKPLLVISGINRGSSCGHHM 173
            E IAV+S EINGA AYEVSGTPVDCVSLALSGALFSWSKPLLVISGINRGS+CGHHM
Sbjct: 110 HEAIAVTSVEINGAIAYEVSGTPVDCVSLALSGALFSWSKPLLVISGINRGSNCGHHM 167

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359807197|ref|NP_001241615.1| uncharacterized protein LOC100779772 [Glycine max] gi|255641206|gb|ACU20880.1| unknown [Glycine max]

 Score =  223 bits (568), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 111/166 (66%), Positives = 141/166 (84%), Gaps = 10/166 (6%)

Query: 8   LMPPGLVSNLEQVLLNKKKKSKDNDDDGDDGTSKQSNEEANESTEPSTSDSTENVDSSKP 67
           +MPPGLVSNL++VLLN+K    D++ + +   ++Q +E+++E++EP         D+SKP
Sbjct: 1   MMPPGLVSNLQEVLLNRKG---DSNSNSNSNNAEQ-HEQSSENSEPV------EFDASKP 50

Query: 68  VLLVTNGDGIESPGLVYLVEALVREGLYNVHVCAPQSDKSVSGHSVTLRETIAVSSAEIN 127
           ++LVTN DG+ESPGL +LVEALV++GLYNVHVC PQSDKSVS HSVTLRETI  +SA+I+
Sbjct: 51  IVLVTNSDGVESPGLTHLVEALVQQGLYNVHVCVPQSDKSVSAHSVTLRETIEAASAKIS 110

Query: 128 GATAYEVSGTPVDCVSLALSGALFSWSKPLLVISGINRGSSCGHHM 173
           GATA+E+SGTPVDCVSLALSGALFSWSKP+LVISGINRGS+CGHHM
Sbjct: 111 GATAFEISGTPVDCVSLALSGALFSWSKPMLVISGINRGSNCGHHM 156

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357454581|ref|XP_003597571.1| 5'-nucleotidase surE [Medicago truncatula] gi|355486619|gb|AES67822.1| 5'-nucleotidase surE [Medicago truncatula]

 Score =  214 bits (545), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 107/166 (64%), Positives = 130/166 (78%), Gaps = 9/166 (5%)

Query: 8   LMPPGLVSNLEQVLLNKKKKSKDNDDDGDDGTSKQSNEEANESTEPSTSDSTENVDSSKP 67
           +MPPGLVSNL++ LLN+K      D+  D  T   +N++ N + +P         D SKP
Sbjct: 1   MMPPGLVSNLQEALLNRKITPSQQDESND--TVSSTNDD-NPNPKPI------EFDESKP 51

Query: 68  VLLVTNGDGIESPGLVYLVEALVREGLYNVHVCAPQSDKSVSGHSVTLRETIAVSSAEIN 127
           ++L+TN DG+ES GL +LVEALV + LYNVHVC PQSDKSVSGHSVT+RET+   SA++N
Sbjct: 52  IILLTNSDGVESSGLTHLVEALVLQNLYNVHVCVPQSDKSVSGHSVTIRETVEACSAQVN 111

Query: 128 GATAYEVSGTPVDCVSLALSGALFSWSKPLLVISGINRGSSCGHHM 173
           GATA+E+SGTPVDCVSLALSGALFSWSKP+LVISGINRGSSCGHHM
Sbjct: 112 GATAFEISGTPVDCVSLALSGALFSWSKPVLVISGINRGSSCGHHM 157

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255560747|ref|XP_002521387.1| acid phosphatase, putative [Ricinus communis] gi|223539465|gb|EEF41055.1| acid phosphatase, putative [Ricinus communis]

 Score =  211 bits (536), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 113/163 (69%), Positives = 135/163 (82%), Gaps = 11/163 (6%)

Query: 1   MTSVRNNLMPPGLVSNLEQVLLNKKKKSKDNDDDGDDGTSKQSNEEANESTEPSTSDSTE 60
           MTSV+NN +PPGLV+NL++VLLN+K  +++            +N + N+S EPSTS S E
Sbjct: 1   MTSVKNNFLPPGLVTNLQEVLLNRKSGNEEA-------NDDNNNNDNNKSNEPSTSTSAE 53

Query: 61  NV----DSSKPVLLVTNGDGIESPGLVYLVEALVREGLYNVHVCAPQSDKSVSGHSVTLR 116
           N     D+SKP+LLVTNGDGIESPGL+ LV+ALV EGLYNVHVCAPQSDKSVSGHSVTL+
Sbjct: 54  NTSQIEDNSKPILLVTNGDGIESPGLLSLVDALVHEGLYNVHVCAPQSDKSVSGHSVTLQ 113

Query: 117 ETIAVSSAEINGATAYEVSGTPVDCVSLALSGALFSWSKPLLV 159
           ETI+V+S E+NGATA+EV+GTPVDCVSLALSGALFSWSKPLLV
Sbjct: 114 ETISVNSVEMNGATAFEVAGTPVDCVSLALSGALFSWSKPLLV 156

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	198
TAIR|locus:2032652	385	AT1G72880 "AT1G72880" [Arabido	0.838	0.431	0.591	1e-45
TAIR|locus:2129510	315	AT4G14930 "AT4G14930" [Arabido	0.560	0.352	0.508	4e-26
TIGR_CMR|CJE_0339	258	CJE_0339 "acid phosphatase Sur	0.494	0.379	0.427	2.3e-14
TIGR_CMR|GSU_1523	262	GSU_1523 "stationary-phase sur	0.479	0.362	0.431	4.9e-14
TIGR_CMR|CHY_0957	264	CHY_0957 "acid phosphatase Sur	0.505	0.378	0.403	6.2e-14
TIGR_CMR|DET_0797	265	DET_0797 "acid phosphatase Sur	0.489	0.366	0.419	2.2e-12
UNIPROTKB|P0A840	253	surE "broad specificity 5'(3')	0.484	0.379	0.392	3.5e-11
UNIPROTKB|Q9KUI9	250	surE "5'-nucleotidase SurE" [V	0.484	0.384	0.382	5.7e-11
TIGR_CMR|VC_0531	250	VC_0531 "survival protein SurE	0.484	0.384	0.382	5.7e-11
UNIPROTKB|Q9KI21	258	surE "5'-nucleotidase SurE" [C	0.479	0.368	0.382	6.8e-11

TAIR|locus:2032652 AT1G72880 "AT1G72880" [Arabidopsis thaliana (taxid:3702)]

 Score = 480 (174.0 bits), Expect = 1.0e-45, P = 1.0e-45
 Identities = 103/174 (59%), Positives = 120/174 (68%)

Query:     1 MTSVRNNLMPPGLVSNLEQVLLXXXXXXXXXXXXXXXXXXXQSNEEA-NXXXXXXXXXXX 59
             MTS +NN +   LVSNL+ VL                     S EEA +           
Sbjct:     1 MTS-KNNGLSAALVSNLQDVL------SKRKVGNEEKVGSDGSAEEAPSTSDSVDVASVE 53

Query:    60 XNVDSSKPVLLVTNGDGIESPGLVYLVEALVREGLYNVHVCAPQSDKSVSGHSVTLRETI 119
               +D S+P++LVTNGDGI+SPGLV LVEALV EGLYNVHVCAPQ+DKS S HS T  ETI
Sbjct:    54 EEIDDSRPIVLVTNGDGIDSPGLVSLVEALVLEGLYNVHVCAPQTDKSASAHSTTPGETI 113

Query:   120 AVSSAEINGATAYEVSGTPVDCVSLALSGALFSWSKPLLVISGINRGSSCGHHM 173
             AVSS ++ GATA+EVSGTPVDC+SL LSGALF+WSKP+LVISGIN+GSSCGH M
Sbjct:   114 AVSSVKLKGATAFEVSGTPVDCISLGLSGALFAWSKPILVISGINQGSSCGHQM 167

GO:0003993 "acid phosphatase activity" evidence=ISS

GO:0005737 "cytoplasm" evidence=ISM

GO:0016787 "hydrolase activity" evidence=IEA

TAIR|locus:2129510 AT4G14930 "AT4G14930" [Arabidopsis thaliana (taxid:3702)]

 Score = 295 (108.9 bits), Expect = 4.0e-26, P = 4.0e-26
 Identities = 57/112 (50%), Positives = 75/112 (66%)

Query:    62 VDSSKPVLLVTNGDGIESPGLVYLVEALVREGLYNVHVCAPQSDKSVSGHSVTLRETIAV 121
             +   +P+++VTN DGI++PGL  LV  LV   LY+V VCAP S+KS   HS+     +  
Sbjct:     9 ISGERPIIMVTNDDGIDAPGLRSLVRVLVSTNLYDVRVCAPDSEKSAVSHSIIWSRPLTA 68

Query:   122 SSAEINGATAYEVSGTPVDCVSLALSGALFSWSKPLLVISGINRGSSCGHHM 173
                EI+GATAY V GTP DC  L LS ALF  S+P LV+SGIN GS+CG+++
Sbjct:    69 KRVEIDGATAYSVDGTPADCTGLGLSEALFP-SRPDLVLSGINVGSNCGYNI 119

GO:0003993 "acid phosphatase activity" evidence=ISS

GO:0005737 "cytoplasm" evidence=ISM

GO:0016787 "hydrolase activity" evidence=IEA

GO:0005829 "cytosol" evidence=IDA

TIGR_CMR|CJE_0339 CJE_0339 "acid phosphatase SurE" [Campylobacter jejuni RM1221 (taxid:195099)]

 Score = 184 (69.8 bits), Expect = 2.3e-14, P = 2.3e-14
 Identities = 44/103 (42%), Positives = 61/103 (59%)

Query:    69 LLVTNGDGIESPGLVYLVEALVREGLYNVHVCAPQSDKSVSGHSVTLRETIAVSSAEING 128
             +L+TN DG ES GL  L++ L +E    + + AP S+KS   HS+TL + +        G
Sbjct:     4 ILITNDDGYESEGLKKLIKMLTKEFKAKITIVAPASEKSACSHSITLTKPLRFVKV---G 60

Query:   129 ATAYEVS-GTPVDCVSLALSGALFSWSKPLLVISGINRGSSCG 170
                Y++  GTP DCV LAL  AL+    P LVISGIN+G++ G
Sbjct:    61 KRFYKLDDGTPADCVYLALH-ALYKKRLPDLVISGINKGANVG 102

GO:0003993 "acid phosphatase activity" evidence=ISS

GO:0006950 "response to stress" evidence=ISS

TIGR_CMR|GSU_1523 GSU_1523 "stationary-phase survival protein SurE" [Geobacter sulfurreducens PCA (taxid:243231)]

 Score = 181 (68.8 bits), Expect = 4.9e-14, P = 4.9e-14
 Identities = 44/102 (43%), Positives = 61/102 (59%)

Query:    69 LLVTNGDGIESPGLVYLVEALVREGLYNVHVCAPQSDKSVSGHSVTLRETIAVSSAEING 128
             +LVTN DG+ +PG+V L EAL   G   V V AP  ++S  GH++TL   + V+  EI  
Sbjct:     3 ILVTNDDGVHAPGIVALAEALRLVG--TVTVVAPDRERSAVGHALTLHHPLRVT--EIM- 57

Query:   129 ATAYEVSGTPVDCVSLALSGALFSWSKPLLVISGINRGSSCG 170
             A  + V GTP DCV+L +   L     P +V+SG+NRG + G
Sbjct:    58 AGIFAVDGTPTDCVNLGIHTLLAE--APDIVVSGVNRGGNLG 97

GO:0003993 "acid phosphatase activity" evidence=ISS

GO:0006950 "response to stress" evidence=ISS

TIGR_CMR|CHY_0957 CHY_0957 "acid phosphatase SurE" [Carboxydothermus hydrogenoformans Z-2901 (taxid:246194)]

 Score = 180 (68.4 bits), Expect = 6.2e-14, P = 6.2e-14
 Identities = 42/104 (40%), Positives = 58/104 (55%)

Query:    69 LLVTNGDGIESPGLVYLVEALVREGLYNVHVCAPQSDKSVSGHSVTLRETIAVSSAEING 128
             +L+TN DGI +PG+  L + L +EG Y + V AP  +KS +GH +T+   +         
Sbjct:     3 ILLTNDDGIYAPGIKALRQVLEKEGKYELTVVAPDREKSATGHGITVHRPLRAFDITFKN 62

Query:   129 ATAYEVS--GTPVDCVSLALSGALFSWSKPLLVISGINRGSSCG 170
             +    VS  GTP DCV LA+  AL     P LV+SGIN G + G
Sbjct:    63 SKVRGVSVDGTPADCVKLAVE-ALLD-KPPDLVLSGINSGPNLG 104

GO:0003993 "acid phosphatase activity" evidence=ISS

GO:0006950 "response to stress" evidence=ISS

TIGR_CMR|DET_0797 DET_0797 "acid phosphatase SurE" [Dehalococcoides ethenogenes 195 (taxid:243164)]

 Score = 166 (63.5 bits), Expect = 2.2e-12, P = 2.2e-12
 Identities = 44/105 (41%), Positives = 61/105 (58%)

Query:    69 LLVTNGDGIESPGLVYLVEALVREGLYNVHVCAPQSDKSVSGHSVTLRETIAVSSAE--I 126
             +LV+N DGI S GL  LV+ L   G   V V AP  ++S +G  VTLR+ + V      I
Sbjct:     3 ILVSNDDGIYSSGLWALVKRLKEVG--EVVVVAPDREQSATGTQVTLRQPLRVQKTHPLI 60

Query:   127 NGATAYEVSGTPVDCVSLALSGALFSWSKPL-LVISGINRGSSCG 170
              G  AY V G+P DCV + L+  +   ++P+ LV+SGIN G + G
Sbjct:    61 PGIEAYSVEGSPCDCVIMGLAKLI---TEPVDLVVSGINHGLNLG 102

GO:0003993 "acid phosphatase activity" evidence=ISS

GO:0006950 "response to stress" evidence=ISS

UNIPROTKB|P0A840 surE "broad specificity 5'(3')-nucleotidase and polyphosphatase" [Escherichia coli K-12 (taxid:83333)]

 Score = 155 (59.6 bits), Expect = 3.5e-11, P = 3.5e-11
 Identities = 40/102 (39%), Positives = 64/102 (62%)

Query:    69 LLVTNGDGIESPGLVYLVEALVREGLYNVHVCAPQSDKSVSGHSVTLRETIAVSSAEING 128
             +L++N DG+ +PG+  L +AL RE   +V V AP  ++S + +S+TL  ++   + E NG
Sbjct:     3 ILLSNDDGVHAPGIQTLAKAL-RE-FADVQVVAPDRNRSGASNSLTLESSLRTFTFE-NG 59

Query:   129 ATAYEVSGTPVDCVSLALSGALFSWSKPLLVISGINRGSSCG 170
               A ++ GTP DCV L ++ AL    +P +V+SGIN G + G
Sbjct:    60 DIAVQM-GTPTDCVYLGVN-ALMR-PRPDIVVSGINAGPNLG 98

GO:0006464 "cellular protein modification process" evidence=IMP

GO:0046872 "metal ion binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0004309 "exopolyphosphatase activity" evidence=IEA;IDA

GO:0000166 "nucleotide binding" evidence=IEA

GO:0008253 "5'-nucleotidase activity" evidence=IEA;IDA

GO:0008254 "3'-nucleotidase activity" evidence=IEA;IDA

UNIPROTKB|Q9KUI9 surE "5'-nucleotidase SurE" [Vibrio cholerae O1 biovar El Tor str. N16961 (taxid:243277)]

 Score = 153 (58.9 bits), Expect = 5.7e-11, P = 5.7e-11
 Identities = 39/102 (38%), Positives = 60/102 (58%)

Query:    69 LLVTNGDGIESPGLVYLVEALVREGLYNVHVCAPQSDKSVSGHSVTLRETIAVSSAEING 128
             +L++N DG+ + G+  L +AL R+ L  + + AP  ++S + +S+TL   + VS    N 
Sbjct:     3 ILLSNDDGVYAQGIHALADAL-RD-LAEIVIVAPDRNRSGASNSLTLEHPLRVSQIAEN- 59

Query:   129 ATAYEVSGTPVDCVSLALSGALFSWSKPLLVISGINRGSSCG 170
                Y V GTP DCV  AL+  L   + P LV+SGIN G++ G
Sbjct:    60 --TYSVQGTPTDCVHFALN-ELMKDALPDLVLSGINHGANLG 98

GO:0006950 "response to stress" evidence=ISS

TIGR_CMR|VC_0531 VC_0531 "survival protein SurE" [Vibrio cholerae O1 biovar El Tor (taxid:686)]

 Score = 153 (58.9 bits), Expect = 5.7e-11, P = 5.7e-11
 Identities = 39/102 (38%), Positives = 60/102 (58%)

Query:    69 LLVTNGDGIESPGLVYLVEALVREGLYNVHVCAPQSDKSVSGHSVTLRETIAVSSAEING 128
             +L++N DG+ + G+  L +AL R+ L  + + AP  ++S + +S+TL   + VS    N 
Sbjct:     3 ILLSNDDGVYAQGIHALADAL-RD-LAEIVIVAPDRNRSGASNSLTLEHPLRVSQIAEN- 59

Query:   129 ATAYEVSGTPVDCVSLALSGALFSWSKPLLVISGINRGSSCG 170
                Y V GTP DCV  AL+  L   + P LV+SGIN G++ G
Sbjct:    60 --TYSVQGTPTDCVHFALN-ELMKDALPDLVLSGINHGANLG 98

GO:0006950 "response to stress" evidence=ISS

UNIPROTKB|Q9KI21 surE "5'-nucleotidase SurE" [Coxiella burnetii RSA 493 (taxid:227377)]

 Score = 153 (58.9 bits), Expect = 6.8e-11, P = 6.8e-11
 Identities = 39/102 (38%), Positives = 59/102 (57%)

Query:    69 LLVTNGDGIESPGLVYLVEALVREGLYNVHVCAPQSDKSVSGHSVTLRETIAVSSAEING 128
             LL++N DG+ + GL  L + L   G   V V AP  ++S + +S+TL   + + + E NG
Sbjct:    11 LLLSNDDGVYAKGLAILAKTLADLG--EVDVVAPDRNRSGASNSLTLNAPLHIKNLE-NG 67

Query:   129 ATAYEVSGTPVDCVSLALSGALFSWSKPLLVISGINRGSSCG 170
               + E  GTP DCV LA++G L     P +V++GIN G + G
Sbjct:    68 MISVE--GTPTDCVHLAITGVLPEM--PDMVVAGINAGPNLG 105

GO:0003674 "molecular_function" evidence=ND

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	3.1.3	LOW CONFIDENCE prediction!
3rd Layer	3.1.3.5	LOW CONFIDENCE prediction!

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Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input:
	GSVIVG00034123001	SubName- Full=Chromosome chr9 scaffold_7, whole genome shotgun sequence; (384 aa)
		(Vitis vinifera)
Predicted Functional Partners:
	GSVIVG00002094001	SubName- Full=Chromosome chr19 scaffold_126, whole genome shotgun sequence; (578 aa)						•			0.907
	GSVIVG00025551001	RecName- Full=Adenylosuccinate synthetase; EC=6.3.4.4;; Plays an important role in the de novo [...] (489 aa)	•					•			0.903
	GSVIVG00006894001	SubName- Full=Putative uncharacterized protein (Chromosome chr10 scaffold_179, whole genome sho [...] (355 aa)						•			0.901
	GSVIVG00000429001	SubName- Full=Chromosome chr2 scaffold_105, whole genome shotgun sequence; (534 aa)	•					•			0.901
	GSVIVG00038865001	SubName- Full=Chromosome chr8 scaffold_99, whole genome shotgun sequence; (825 aa)						•			0.899
	GSVIVG00036953001	SubName- Full=Chromosome chr1 scaffold_84, whole genome shotgun sequence; (417 aa)						•			0.899
	GSVIVG00036692001	SubName- Full=Chromosome chr15 scaffold_82, whole genome shotgun sequence; (252 aa)						•			0.899
	GSVIVG00036344001	RecName- Full=Thymidylate synthase; EC=2.1.1.45; (284 aa)						•			0.899
	GSVIVG00035062001	SubName- Full=Chromosome chr1 scaffold_75, whole genome shotgun sequence; (221 aa)						•			0.899
	GSVIVG00034853001	SubName- Full=Chromosome chr4 scaffold_73, whole genome shotgun sequence; (250 aa)						•			0.899

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Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	198
pfam01975	188	pfam01975, SurE, Survival protein SurE	1e-38
PRK00346	250	PRK00346, surE, 5'(3')-nucleotidase/polyphosphatas	1e-27
COG0496	252	COG0496, SurE, Predicted acid phosphatase [General	2e-24
TIGR00087	244	TIGR00087, surE, 5'/3'-nucleotidase SurE	9e-22
PRK13935	253	PRK13935, PRK13935, stationary phase survival prot	4e-21
PRK13933	253	PRK13933, PRK13933, stationary phase survival prot	2e-20
PRK13932	257	PRK13932, PRK13932, stationary phase survival prot	3e-18
PRK13934	266	PRK13934, PRK13934, stationary phase survival prot	4e-17
PRK13931	261	PRK13931, PRK13931, stationary phase survival prot	6e-08

>gnl|CDD|216821 pfam01975, SurE, Survival protein SurE

 Score =  130 bits (330), Expect = 1e-38
 Identities = 47/104 (45%), Positives = 61/104 (58%), Gaps = 6/104 (5%)

Query: 70  LVTNGDGIESPGLVYLVEALVREGLYNVHVCAPQSDKSVSGHSVTLRETIAVSSAEINGA 129
           L+TN DGI +PG+  L EAL   G   V V AP  ++S  GHS+TL   + V   +    
Sbjct: 4   LLTNDDGIHAPGIRALAEALKALG--EVTVVAPDREQSGVGHSITLHRPLRV---KKVDP 58

Query: 130 TAYEVSGTPVDCVSLALSGALFSWSKPLLVISGINRGSSCGHHM 173
            AY V+GTP DCV L L+G L    KP LV+SGIN G++ G  +
Sbjct: 59  GAYAVNGTPADCVKLGLNG-LLDDKKPDLVVSGINHGANLGTDV 101

E. coli cells with the surE gene disrupted are found to survive poorly in stationary phase. It is suggested that SurE may be involved in stress response. Yeast also contains a member of the family, probable tubulin-tyrosine ligase PBY1. Yarrowia lipolytica PHO2 can complement a mutation in acid phosphatase, suggesting that members of this family could be phosphatases. Length = 188

>gnl|CDD|234732 PRK00346, surE, 5'(3')-nucleotidase/polyphosphatase; Provisional

 Score =  104 bits (261), Expect = 1e-27
 Identities = 45/98 (45%), Positives = 58/98 (59%), Gaps = 7/98 (7%)

Query: 70  LVTNGDGIESPGLVYLVEALVREGLYNVHVCAPQSDKSVSGHSVTLRETIAVSSAEINGA 129
           L+TN DGI +PG+  L EAL    L +V V AP  ++S + HS+TL   + V   +    
Sbjct: 4   LLTNDDGIHAPGIRALAEAL--RELADVTVVAPDRERSGASHSLTLTRPLRVEKVD---N 58

Query: 130 TAYEVSGTPVDCVSLALSGALFSWSKPLLVISGINRGS 167
             Y V GTP DCV LAL+G L    KP LV+SGIN G+
Sbjct: 59  GFYAVDGTPTDCVHLALNG-LLD-PKPDLVVSGINHGA 94

Length = 250

>gnl|CDD|223570 COG0496, SurE, Predicted acid phosphatase [General function prediction only]

 Score = 95.8 bits (239), Expect = 2e-24
 Identities = 42/97 (43%), Positives = 56/97 (57%), Gaps = 6/97 (6%)

Query: 70  LVTNGDGIESPGLVYLVEALVREGLYNVHVCAPQSDKSVSGHSVTLRETIAVSSAEINGA 129
           L+TN DGI +PG+  L  AL      +V V AP  ++S + HS+TL E + V   +    
Sbjct: 4   LLTNDDGIHAPGIRALARAL--REGADVTVVAPDREQSGASHSLTLHEPLRVRQVDNG-- 59

Query: 130 TAYEVSGTPVDCVSLALSGALFSWSKPLLVISGINRG 166
            AY V+GTP DCV L L+  L    +P LV+SGIN G
Sbjct: 60  -AYAVNGTPADCVILGLNE-LLKEPRPDLVVSGINAG 94

Length = 252

>gnl|CDD|232819 TIGR00087, surE, 5'/3'-nucleotidase SurE

 Score = 88.6 bits (220), Expect = 9e-22
 Identities = 47/103 (45%), Positives = 60/103 (58%), Gaps = 5/103 (4%)

Query: 69  LLVTNGDGIESPGLVYLVEALVREGLYNVHVCAPQSDKSVSGHSVTLRETIAVSSAEI-N 127
           +L+TN DGI SPG+  L +AL   G   V V AP   +S +GHS+TL E + V   ++ N
Sbjct: 3   ILLTNDDGIHSPGIRALYQALKELG--EVTVVAPARQRSGTGHSLTLFEPLRVGQVKVKN 60

Query: 128 GATAYEVSGTPVDCVSLALSGALFSWSKPLLVISGINRGSSCG 170
           GA  Y V GTP DCV L ++        P LVISGIN G + G
Sbjct: 61  GAHIYAVDGTPTDCVILGIN--ELMPEVPDLVISGINAGENLG 101

This protein family originally was named SurE because of its role in stationary phase survivalin Escherichia coli. In E. coli, surE is next to pcm, an L-isoaspartyl protein repair methyltransferase that is also required for stationary phase survival. Recent work (PMID:15489502) shows that viewing SurE as an acid phosphatase (3.1.3.2) is not accurate. Rather, SurE in E. coli, Thermotoga maritima, and Pyrobaculum aerophilum acts strictly on nucleoside 5'- and 3'-monophosphates. E. coli SurE is Recommended cutoffs are 15 for homology, 40 for probable orthology, and 200 for orthology with full-length homology [Cellular processes, Adaptations to atypical conditions]. Length = 244

>gnl|CDD|237566 PRK13935, PRK13935, stationary phase survival protein SurE; Provisional

 Score = 87.1 bits (216), Expect = 4e-21
 Identities = 43/103 (41%), Positives = 59/103 (57%), Gaps = 5/103 (4%)

Query: 69  LLVTNGDGIESPGLVYLVEALVREGLYNVHVCAPQSDKSVSGHSVTLRETIAVSSAEING 128
           +LVTN DGI SPG++ L E L  +  + V V AP  ++S +GH++T+R  +      I+ 
Sbjct: 3   ILVTNDDGITSPGIIILAEYLSEK--HEVFVVAPDKERSATGHAITIRVPLWAKKVFISE 60

Query: 129 AT-AYEVSGTPVDCVSLALSGALFSWSKPLLVISGINRGSSCG 170
              AY  +GTP DCV L     +    K  LVISGINRG + G
Sbjct: 61  RFVAYATTGTPADCVKLGYDVIMD--KKVDLVISGINRGPNLG 101

Length = 253

>gnl|CDD|184406 PRK13933, PRK13933, stationary phase survival protein SurE; Provisional

 Score = 85.6 bits (212), Expect = 2e-20
 Identities = 40/105 (38%), Positives = 63/105 (60%), Gaps = 8/105 (7%)

Query: 69  LLVTNGDGIESPGLVYLVEALVREGLYNVHVCAPQSDKSVSGHSVTLRETIAVSSAEING 128
           +L+TN DGI + G+  L E L +   + V + AP++ +S S HS+T+ E I +   ++ G
Sbjct: 3   ILLTNDDGINAEGINTLAELLSKY--HEVIIVAPENQRSASSHSITIYEPIIIKEVKLEG 60

Query: 129 --ATAYEVSGTPVDCVSLALSGALFSWSKPL-LVISGINRGSSCG 170
             + AY +SGTP DCV +AL   +      + +VISGIN+G + G
Sbjct: 61  INSKAYSISGTPADCVRVALDKLV---PDNIDMVISGINKGLNIG 102

Length = 253

>gnl|CDD|172445 PRK13932, PRK13932, stationary phase survival protein SurE; Provisional

 Score = 79.4 bits (196), Expect = 3e-18
 Identities = 43/103 (41%), Positives = 57/103 (55%), Gaps = 5/103 (4%)

Query: 66  KPVLLVTNGDGIESPGLVYLVEALVREGLYNVHVCAPQSDKSVSGHSVTLRETIAVSSAE 125
           KP +LV N DGIE  G+  L  ++ + G   V V AP    S   H++TL   + +   +
Sbjct: 5   KPHILVCNDDGIEGEGIHVLAASMKKIG--RVTVVAPAEPHSGMSHAMTLGVPLRIKEYQ 62

Query: 126 INGAT-AYEVSGTPVDCVSLALSGALFSWSKPLLVISGINRGS 167
            N     Y VSGTPVDC+ +ALS  L    KP L++SGIN GS
Sbjct: 63  KNNRFFGYTVSGTPVDCIKVALSHILP--EKPDLIVSGINYGS 103

Length = 257

>gnl|CDD|237565 PRK13934, PRK13934, stationary phase survival protein SurE; Provisional

 Score = 76.7 bits (189), Expect = 4e-17
 Identities = 40/98 (40%), Positives = 54/98 (55%), Gaps = 5/98 (5%)

Query: 69  LLVTNGDGIESPGLVYLVEALVREGLYNVHVCAPQSDKSVSGHSVTLRETIAVSSAEING 128
           +LVTN DG+ SPGL  L E +    L  V V AP++ KS +G  +TL + + +   ++ G
Sbjct: 3   ILVTNDDGVHSPGLRLLYEFV--SPLGEVDVVAPETPKSATGLGITLHKPLRMYEVDLCG 60

Query: 129 ATAYEVSGTPVDCVSLALSGALFSWSKPLLVISGINRG 166
              Y  SGTP D + LA  G      K  LV+SGIN G
Sbjct: 61  FKVYATSGTPSDTIYLATYG--LG-RKYDLVLSGINLG 95

Length = 266

>gnl|CDD|184405 PRK13931, PRK13931, stationary phase survival protein SurE; Provisional

 Score = 50.9 bits (122), Expect = 6e-08
 Identities = 38/107 (35%), Positives = 56/107 (52%), Gaps = 12/107 (11%)

Query: 69  LLVTNGDGIESPGLVYLVEALVRE-----GLYNVHVCAPQSDKSVSGHSVTLRETIAVSS 123
           +L+TN DGI +PGL  L E +  E     G   V   AP  ++S  GH ++   T  +  
Sbjct: 3   ILITNDDGINAPGLEVL-EQIATELAGPDG--EVWTVAPAFEQSGVGHCISY--THPMMI 57

Query: 124 AEINGATAYEVSGTPVDCVSLALSGALFSWSKPLLVISGINRGSSCG 170
           AE+ G   +   G+P DCV  AL   +   + P LV+SG+NRG++  
Sbjct: 58  AEL-GPRRFAAEGSPADCVLAALYDVMKD-APPDLVLSGVNRGNNSA 102

Length = 261

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	198
PF01975	196	SurE: Survival protein SurE; InterPro: IPR002828 T	100.0
PRK13932	257	stationary phase survival protein SurE; Provisiona	100.0
TIGR00087	244	surE 5'/3'-nucleotidase SurE. E. coli SurE is Reco	100.0
PRK13935	253	stationary phase survival protein SurE; Provisiona	100.0
PRK13933	253	stationary phase survival protein SurE; Provisiona	100.0
PRK13931	261	stationary phase survival protein SurE; Provisiona	100.0
PRK13934	266	stationary phase survival protein SurE; Provisiona	100.0
PRK00346	250	surE 5'(3')-nucleotidase/polyphosphatase; Provisio	100.0
COG0496	252	SurE Predicted acid phosphatase [General function	100.0
PLN02846	462	digalactosyldiacylglycerol synthase	87.61
PF13439	177	Glyco_transf_4: Glycosyltransferase Family 4; PDB:	81.94
cd03814	364	GT1_like_2 This family is most closely related to	81.26
TIGR01133	348	murG undecaprenyldiphospho-muramoylpentapeptide be	80.85

>PF01975 SurE: Survival protein SurE; InterPro: IPR002828 This entry represents a SurE-like structural domain with a 3-layer alpha/bete/alpha topology that bears some topological similarity to the N-terminal domain of the glutaminase/asparaginase family

Probab=100.00  E-value=1.9e-52  Score=352.34  Aligned_cols=126  Identities=43%  Similarity=0.616  Sum_probs=107.9

Q ss_pred             CeEEEecCCCCCCccHHHHHHHHHhcCCCcEEEEecCCCCcccccccCCCCCeEEEEee----eCCceeEEEcCchHHHH
Q 029120           67 PVLLVTNGDGIESPGLVYLVEALVREGLYNVHVCAPQSDKSVSGHSVTLRETIAVSSAE----INGATAYEVSGTPVDCV  142 (198)
Q Consensus        67 ~~ILlTNDDGi~spGI~aL~~aL~~~G~~dV~VvAP~~~qSg~g~siTl~~pl~v~~v~----~~g~~~~~V~GTPaDCV  142 (198)
                      |||||||||||+||||++|+++|++.| |+|+||||++||||+||++|+++|+++++++    ..+.+.|+|+|||+|||
T Consensus         1 M~ILlTNDDGi~a~Gi~aL~~~L~~~g-~~V~VvAP~~~~Sg~g~sit~~~pl~~~~~~~~~~~~~~~~~~v~GTPaDcv   79 (196)
T PF01975_consen    1 MRILLTNDDGIDAPGIRALAKALSALG-HDVVVVAPDSEQSGTGHSITLHKPLRVTEVEPGHDPGGVEAYAVSGTPADCV   79 (196)
T ss_dssp             SEEEEE-SS-TTSHHHHHHHHHHTTTS-SEEEEEEESSSTTTSTTS--SSSEEEEEEEE-TTCCSTTEEEEESS-HHHHH
T ss_pred             CeEEEEcCCCCCCHHHHHHHHHHHhcC-CeEEEEeCCCCCcCcceeecCCCCeEEEEEEecccCCCCCEEEEcCcHHHHH
Confidence            899999999999999999999998887 8999999999999999999999999998875    34678999999999999


Q ss_pred             HHHHhcccCCCCCCcEEEecCCCCCCCcCcccchhhHHHHHHHHHcCCCCCccc
Q 029120          143 SLALSGALFSWSKPLLVISGINRGSSCGHHMCCCRSQRGINLWCTFSVHIPKLE  196 (198)
Q Consensus       143 ~laL~~~l~~~~~PDLVISGIN~G~N~G~~v~ySGTVgAA~EAa~~G~~iPAIa  196 (198)
                      ++||+.+++ +.+|||||||||+|.|+|.+++||||||||+||+++|  |||||
T Consensus        80 ~~al~~~~~-~~~pDLViSGiN~G~N~g~~v~~SGTVgAA~ea~~~G--ipaIA  130 (196)
T PF01975_consen   80 KLALDGLLP-DKKPDLVISGINHGANLGTDVLYSGTVGAAMEAALRG--IPAIA  130 (196)
T ss_dssp             HHHHHCTST-TSS-SEEEEEEEES---GGGGGG-HHHHHHHHHHHTT--SEEEE
T ss_pred             HHHHHhhhc-cCCCCEEEECCCCCccCCcCcccccHHHHHHHHHHcC--CCeEE
Confidence            999999754 4579999999999999999999999999999999986  89998

This domain is found in the stationary phase survival protein SurE, a metal ion-dependent phosphatase found in eubacteria, archaea and eukaryotes. In Escherichia coli, SurE also has activity as a nucleotidase and exopolyphosphatase, and may be involved in the stress response []. E. coli cells with mutations in the surE gene survive poorly in stationary phase []. The structure of SurE homologues have been determined from Thermotoga maritima [] and the archaea Pyrobaculum aerophilum []. The T. maritima SurE homologue has phosphatase activity that is inhibited by vanadate or tungstate, both of which bind adjacent to the divalent metal ion. This domain is found in acid phosphatases (3.1.3.2 from EC), 5'-nucleotidases (3.1.3.5 from EC), 3'-nucleotidases (3.1.3.6 from EC) and exopolyphosphatases (3.6.1.11 from EC).; GO: 0016787 hydrolase activity; PDB: 1L5X_B 2V4O_D 2V4N_A 2WQK_B 2E6G_G 2E69_D 2E6C_C 2E6B_D 2E6E_A 2E6H_A ....

>PRK13932 stationary phase survival protein SurE; Provisional

Probab=100.00  E-value=2.2e-51  Score=359.40  Aligned_cols=127  Identities=36%  Similarity=0.507  Sum_probs=118.0

Q ss_pred             CCCCeEEEecCCCCCCccHHHHHHHHHhcCCCcEEEEecCCCCcccccccCCCCCeEEEEeeeC-CceeEEEcCchHHHH
Q 029120           64 SSKPVLLVTNGDGIESPGLVYLVEALVREGLYNVHVCAPQSDKSVSGHSVTLRETIAVSSAEIN-GATAYEVSGTPVDCV  142 (198)
Q Consensus        64 ~~~~~ILlTNDDGi~spGI~aL~~aL~~~G~~dV~VvAP~~~qSg~g~siTl~~pl~v~~v~~~-g~~~~~V~GTPaDCV  142 (198)
                      .++|||||||||||+||||++|+++|++.|  +|+||||++||||+||++|+++|+++++++.. +..+|.|+|||+|||
T Consensus         3 ~~~M~ILltNDDGi~a~Gi~aL~~~l~~~g--~V~VvAP~~~~Sg~g~ait~~~pl~~~~~~~~~~~~~y~v~GTPaDCV   80 (257)
T PRK13932          3 DKKPHILVCNDDGIEGEGIHVLAASMKKIG--RVTVVAPAEPHSGMSHAMTLGVPLRIKEYQKNNRFFGYTVSGTPVDCI   80 (257)
T ss_pred             CCCCEEEEECCCCCCCHHHHHHHHHHHhCC--CEEEEcCCCCCCCCcccccCCCCeEEEEEccCCCceEEEEcCcHHHHH
Confidence            356899999999999999999999999887  89999999999999999999999999998743 556799999999999


Q ss_pred             HHHHhcccCCCCCCcEEEecCCCCCCCcCcccchhhHHHHHHHHHcCCCCCccc
Q 029120          143 SLALSGALFSWSKPLLVISGINRGSSCGHHMCCCRSQRGINLWCTFSVHIPKLE  196 (198)
Q Consensus       143 ~laL~~~l~~~~~PDLVISGIN~G~N~G~~v~ySGTVgAA~EAa~~G~~iPAIa  196 (198)
                      ++||.+++.  .+|||||||||+|.|+|.+++||||||||+||+++|  |||||
T Consensus        81 ~lal~~~~~--~~pDLVvSGIN~G~N~G~dv~ySGTVgAA~Ea~~~G--iPsIA  130 (257)
T PRK13932         81 KVALSHILP--EKPDLIVSGINYGSNTATNTLYSGTVAAALEGAIQG--IPSLA  130 (257)
T ss_pred             HHHHHhhcC--CCCCEEEECCcCCCCCCcCEecchhHHHHHHHHHcC--CCeEE
Confidence            999998653  589999999999999999999999999999999986  89997

>TIGR00087 surE 5'/3'-nucleotidase SurE

Probab=100.00  E-value=3.4e-51  Score=354.95  Aligned_cols=124  Identities=39%  Similarity=0.586  Sum_probs=116.6

Q ss_pred             CeEEEecCCCCCCccHHHHHHHHHhcCCCcEEEEecCCCCcccccccCCCCCeEEEEeee-CCceeEEEcCchHHHHHHH
Q 029120           67 PVLLVTNGDGIESPGLVYLVEALVREGLYNVHVCAPQSDKSVSGHSVTLRETIAVSSAEI-NGATAYEVSGTPVDCVSLA  145 (198)
Q Consensus        67 ~~ILlTNDDGi~spGI~aL~~aL~~~G~~dV~VvAP~~~qSg~g~siTl~~pl~v~~v~~-~g~~~~~V~GTPaDCV~la  145 (198)
                      |||||||||||+||||++|+++|++.|  +|+||||++||||+||++|+++|+++++++. ++.++|+|+|||||||++|
T Consensus         1 M~ILltNDDGi~a~Gi~aL~~~l~~~g--~V~VvAP~~~~Sg~g~ait~~~pl~~~~~~~~~~~~~~~v~GTPaDcv~~g   78 (244)
T TIGR00087         1 MKILLTNDDGIHSPGIRALYQALKELG--EVTVVAPARQRSGTGHSLTLFEPLRVGQVKVKNGAHIYAVDGTPTDCVILG   78 (244)
T ss_pred             CeEEEECCCCCCCHhHHHHHHHHHhCC--CEEEEeCCCCccccccCcCCCCCeEEEEeccCCCccEEEEcCcHHHHHHHH
Confidence            799999999999999999999999987  8999999999999999999999999999874 3557899999999999999


Q ss_pred             HhcccCCCCCCcEEEecCCCCCCCcCcccchhhHHHHHHHHHcCCCCCccc
Q 029120          146 LSGALFSWSKPLLVISGINRGSSCGHHMCCCRSQRGINLWCTFSVHIPKLE  196 (198)
Q Consensus       146 L~~~l~~~~~PDLVISGIN~G~N~G~~v~ySGTVgAA~EAa~~G~~iPAIa  196 (198)
                      |++++  .++|||||||||+|.|+|.+++||||||||+||+++|  |||||
T Consensus        79 l~~l~--~~~pDLVvSGiN~G~N~g~~v~ySGTVgAA~ea~~~G--ipaiA  125 (244)
T TIGR00087        79 INELM--PEVPDLVISGINAGENLGTDVTYSGTVGAAMEAAIHG--VPAIA  125 (244)
T ss_pred             HHHhc--cCCCCeEEeccccCCCCCccEecchhHHHHHHHHHcC--CCeEE
Confidence            99865  3689999999999999999999999999999999986  99997

E. coli SurE is Recommended cutoffs are 15 for homology, 40 for probable orthology, and 200 for orthology with full-length homology.

>PRK13935 stationary phase survival protein SurE; Provisional

Probab=100.00  E-value=9.9e-51  Score=354.59  Aligned_cols=124  Identities=36%  Similarity=0.557  Sum_probs=115.6

Q ss_pred             CeEEEecCCCCCCccHHHHHHHHHhcCCCcEEEEecCCCCcccccccCCCCCeEEEEeee-CCceeEEEcCchHHHHHHH
Q 029120           67 PVLLVTNGDGIESPGLVYLVEALVREGLYNVHVCAPQSDKSVSGHSVTLRETIAVSSAEI-NGATAYEVSGTPVDCVSLA  145 (198)
Q Consensus        67 ~~ILlTNDDGi~spGI~aL~~aL~~~G~~dV~VvAP~~~qSg~g~siTl~~pl~v~~v~~-~g~~~~~V~GTPaDCV~la  145 (198)
                      |||||||||||+||||++|+++|++.  |+|+||||+++|||+||++|+++|+++++++. .+..+|+|+|||+|||++|
T Consensus         1 M~ILlTNDDGi~a~Gi~aL~~~l~~~--~~V~VvAP~~~qSg~g~ait~~~pl~~~~~~~~~~~~~y~v~GTPaDcV~la   78 (253)
T PRK13935          1 MNILVTNDDGITSPGIIILAEYLSEK--HEVFVVAPDKERSATGHAITIRVPLWAKKVFISERFVAYATTGTPADCVKLG   78 (253)
T ss_pred             CeEEEECCCCCCCHHHHHHHHHHHhC--CcEEEEccCCCCccccccccCCCCceEEEeecCCCccEEEECCcHHHHHHHH
Confidence            79999999999999999999999864  59999999999999999999999999999874 3556899999999999999


Q ss_pred             HhcccCCCCCCcEEEecCCCCCCCcCcccchhhHHHHHHHHHcCCCCCccc
Q 029120          146 LSGALFSWSKPLLVISGINRGSSCGHHMCCCRSQRGINLWCTFSVHIPKLE  196 (198)
Q Consensus       146 L~~~l~~~~~PDLVISGIN~G~N~G~~v~ySGTVgAA~EAa~~G~~iPAIa  196 (198)
                      |++++  +++|||||||||+|.|+|.+++||||||||+||+++|  |||||
T Consensus        79 l~~~~--~~~pDLVvSGIN~G~N~g~~v~ySGTVgAA~ea~~~G--iPaiA  125 (253)
T PRK13935         79 YDVIM--DKKVDLVISGINRGPNLGTDVLYSGTVSGALEGAMMG--VPSIA  125 (253)
T ss_pred             HHhhc--cCCCCEEEeCCccCCCCCcCCcccHhHHHHHHHHhcC--CCeEE
Confidence            99865  4689999999999999999999999999999999985  89997

>PRK13933 stationary phase survival protein SurE; Provisional

Probab=100.00  E-value=1.5e-50  Score=353.13  Aligned_cols=124  Identities=32%  Similarity=0.532  Sum_probs=115.4

Q ss_pred             CeEEEecCCCCCCccHHHHHHHHHhcCCCcEEEEecCCCCcccccccCCCCCeEEEEeeeC--CceeEEEcCchHHHHHH
Q 029120           67 PVLLVTNGDGIESPGLVYLVEALVREGLYNVHVCAPQSDKSVSGHSVTLRETIAVSSAEIN--GATAYEVSGTPVDCVSL  144 (198)
Q Consensus        67 ~~ILlTNDDGi~spGI~aL~~aL~~~G~~dV~VvAP~~~qSg~g~siTl~~pl~v~~v~~~--g~~~~~V~GTPaDCV~l  144 (198)
                      |||||||||||+||||++|+++|++.  |+|+||||++||||+||++|+++|+++++++.+  +.++|+|+|||||||++
T Consensus         1 M~ILvtNDDGi~apGl~aL~~~l~~~--~~V~VvAP~~~~Sg~g~sit~~~pl~~~~~~~~~~~~~~~~v~GTPaDcV~l   78 (253)
T PRK13933          1 MNILLTNDDGINAEGINTLAELLSKY--HEVIIVAPENQRSASSHSITIYEPIIIKEVKLEGINSKAYSISGTPADCVRV   78 (253)
T ss_pred             CeEEEEcCCCCCChhHHHHHHHHHhC--CcEEEEccCCCCccccccccCCCCeEEEeeccCCCCccEEEECCcHHHHHHH
Confidence            79999999999999999999999874  599999999999999999999999999998744  34679999999999999


Q ss_pred             HHhcccCCCCCCcEEEecCCCCCCCcCcccchhhHHHHHHHHHcCCCCCccc
Q 029120          145 ALSGALFSWSKPLLVISGINRGSSCGHHMCCCRSQRGINLWCTFSVHIPKLE  196 (198)
Q Consensus       145 aL~~~l~~~~~PDLVISGIN~G~N~G~~v~ySGTVgAA~EAa~~G~~iPAIa  196 (198)
                      ||++++  +.+|||||||||+|.|+|.+++||||||||+||+++|  |||||
T Consensus        79 al~~l~--~~~pDLVvSGIN~G~N~g~dv~ySGTVgAA~ea~~~G--iPsiA  126 (253)
T PRK13933         79 ALDKLV--PDNIDMVISGINKGLNIGNDILYSGTVSAAIEGAIYK--VPSIA  126 (253)
T ss_pred             HHHHhc--CCCCCEEEECCcCCCCCCcCCccchhHHHHHHHHHcC--CCeEE
Confidence            999865  3689999999999999999999999999999999986  99997

>PRK13931 stationary phase survival protein SurE; Provisional

Probab=100.00  E-value=1.6e-50  Score=354.15  Aligned_cols=124  Identities=27%  Similarity=0.431  Sum_probs=113.9

Q ss_pred             CeEEEecCCCCCCccHHHHHHHHHhcC--CCcEEEEecCCCCcccccccCCCCCeEEEEeeeCCceeEEEcCchHHHHHH
Q 029120           67 PVLLVTNGDGIESPGLVYLVEALVREG--LYNVHVCAPQSDKSVSGHSVTLRETIAVSSAEINGATAYEVSGTPVDCVSL  144 (198)
Q Consensus        67 ~~ILlTNDDGi~spGI~aL~~aL~~~G--~~dV~VvAP~~~qSg~g~siTl~~pl~v~~v~~~g~~~~~V~GTPaDCV~l  144 (198)
                      |||||||||||+||||++|+++|++..  .++|+||||+++|||+||++|+++||++++++   ...|+|+|||||||++
T Consensus         1 M~ILlTNDDGI~a~Gl~aL~~~l~~~~~~~~~V~VVAP~~eqSg~ghaiT~~~pl~~~~~~---~~~yav~GTPaDCV~l   77 (261)
T PRK13931          1 MRILITNDDGINAPGLEVLEQIATELAGPDGEVWTVAPAFEQSGVGHCISYTHPMMIAELG---PRRFAAEGSPADCVLA   77 (261)
T ss_pred             CeEEEEcCCCCCCHhHHHHHHHHHHhccCCCeEEEEeCCCCCCCCcccccCCCCeEEEEeC---CCeEEEcCchHHHHHH
Confidence            789999999999999999999998851  14999999999999999999999999999875   2469999999999999


Q ss_pred             HHhcccCCCCCCcEEEecCCCCCCCcCcccchhhHHHHHHHHHcCCCCCccc
Q 029120          145 ALSGALFSWSKPLLVISGINRGSSCGHHMCCCRSQRGINLWCTFSVHIPKLE  196 (198)
Q Consensus       145 aL~~~l~~~~~PDLVISGIN~G~N~G~~v~ySGTVgAA~EAa~~G~~iPAIa  196 (198)
                      ||.+++ .+.+|||||||||+|.|+|.+++||||||||+||+++|  |||||
T Consensus        78 al~~~~-~~~~pDlVvSGIN~G~N~g~~v~ySGTVgAA~Ea~~~G--iPsiA  126 (261)
T PRK13931         78 ALYDVM-KDAPPDLVLSGVNRGNNSAENVLYSGTVGGAMEAALQG--LPAIA  126 (261)
T ss_pred             HHHHhc-CCCCCCEEEECCccCCCCCcCcccchhHHHHHHHHhcC--CCeEE
Confidence            999865 34689999999999999999999999999999999986  89998

>PRK13934 stationary phase survival protein SurE; Provisional

Probab=100.00  E-value=2.1e-50  Score=354.87  Aligned_cols=123  Identities=34%  Similarity=0.480  Sum_probs=116.0

Q ss_pred             CeEEEecCCCCCCccHHHHHHHHHhcCCCcEEEEecCCCCcccccccCCCCCeEEEEeeeCCceeEEEcCchHHHHHHHH
Q 029120           67 PVLLVTNGDGIESPGLVYLVEALVREGLYNVHVCAPQSDKSVSGHSVTLRETIAVSSAEINGATAYEVSGTPVDCVSLAL  146 (198)
Q Consensus        67 ~~ILlTNDDGi~spGI~aL~~aL~~~G~~dV~VvAP~~~qSg~g~siTl~~pl~v~~v~~~g~~~~~V~GTPaDCV~laL  146 (198)
                      |||||||||||+||||++|+++|++.|  +|+||||++||||+||++|+++|+++++++..+.++|+|+|||||||++||
T Consensus         1 M~ILlTNDDGi~apGi~aL~~al~~~g--~V~VvAP~~eqSg~g~aiT~~~pl~~~~~~~~~~~~y~v~GTPaDCV~lal   78 (266)
T PRK13934          1 MKILVTNDDGVHSPGLRLLYEFVSPLG--EVDVVAPETPKSATGLGITLHKPLRMYEVDLCGFKVYATSGTPSDTIYLAT   78 (266)
T ss_pred             CeEEEEcCCCCCCHHHHHHHHHHHhCC--cEEEEccCCCCccccccccCCCCcEEEEeccCCcceEEeCCCHHHHHHHHH
Confidence            789999999999999999999999876  899999999999999999999999999987556778999999999999999


Q ss_pred             hcccCCCCCCcEEEecCCCCCCCcCc-ccchhhHHHHHHHHHcCCCCCccc
Q 029120          147 SGALFSWSKPLLVISGINRGSSCGHH-MCCCRSQRGINLWCTFSVHIPKLE  196 (198)
Q Consensus       147 ~~~l~~~~~PDLVISGIN~G~N~G~~-v~ySGTVgAA~EAa~~G~~iPAIa  196 (198)
                      +++   +.+|||||||||+|.|+|.+ ++||||||||+||+++|  |||||
T Consensus        79 ~~l---~~~pDLViSGIN~G~NlG~d~v~ySGTVgAA~Ea~~~G--IPsIA  124 (266)
T PRK13934         79 YGL---GRKYDLVLSGINLGDNTSLQVILSSGTLGAAFQAALLG--IPAVA  124 (266)
T ss_pred             Hhc---cCCCCeEEecCccCCCCCcCcccccHhHHHHHHHHhcC--CCEEE
Confidence            874   46899999999999999999 89999999999999986  89998

>PRK00346 surE 5'(3')-nucleotidase/polyphosphatase; Provisional

Probab=100.00  E-value=4.1e-50  Score=349.77  Aligned_cols=121  Identities=39%  Similarity=0.586  Sum_probs=113.7

Q ss_pred             CeEEEecCCCCCCccHHHHHHHHHhcCCCcEEEEecCCCCcccccccCCCCCeEEEEeeeCCceeEEEcCchHHHHHHHH
Q 029120           67 PVLLVTNGDGIESPGLVYLVEALVREGLYNVHVCAPQSDKSVSGHSVTLRETIAVSSAEINGATAYEVSGTPVDCVSLAL  146 (198)
Q Consensus        67 ~~ILlTNDDGi~spGI~aL~~aL~~~G~~dV~VvAP~~~qSg~g~siTl~~pl~v~~v~~~g~~~~~V~GTPaDCV~laL  146 (198)
                      |||||||||||+||||++|+++|++.  |+|+||||+++|||+||++|+++|+++++++   ..+|+|+|||||||++||
T Consensus         1 M~ILlTNDDGi~a~Gi~aL~~~l~~~--~~V~VvAP~~~qSg~g~ait~~~pl~~~~~~---~~~~~v~GTPaDcV~~gl   75 (250)
T PRK00346          1 MRILLTNDDGIHAPGIRALAEALREL--ADVTVVAPDRERSGASHSLTLTRPLRVEKVD---NGFYAVDGTPTDCVHLAL   75 (250)
T ss_pred             CeEEEECCCCCCChhHHHHHHHHHhC--CCEEEEeCCCCCcCCcccccCCCCeEEEEec---CCeEEECCcHHHHHHHHH
Confidence            79999999999999999999999987  4999999999999999999999999999875   247999999999999999


Q ss_pred             hcccCCCCCCcEEEecCCCCCCCcCcccchhhHHHHHHHHHcCCCCCccc
Q 029120          147 SGALFSWSKPLLVISGINRGSSCGHHMCCCRSQRGINLWCTFSVHIPKLE  196 (198)
Q Consensus       147 ~~~l~~~~~PDLVISGIN~G~N~G~~v~ySGTVgAA~EAa~~G~~iPAIa  196 (198)
                      +.++.  ++|||||||||+|.|+|.+++||||||||+||+++|  |||||
T Consensus        76 ~~l~~--~~pDlVvSGIN~G~N~g~~v~ySGTVgAA~ea~~~G--iPaiA  121 (250)
T PRK00346         76 NGLLD--PKPDLVVSGINHGANLGDDVLYSGTVAAAMEGALLG--IPAIA  121 (250)
T ss_pred             Hhhcc--CCCCEEEeCCccCCCCCCCeeccHHHHHHHHHHhcC--CCeEE
Confidence            98653  589999999999999999999999999999999986  89998

>COG0496 SurE Predicted acid phosphatase [General function prediction only]

Probab=100.00  E-value=7.9e-50  Score=349.06  Aligned_cols=122  Identities=39%  Similarity=0.590  Sum_probs=114.3

Q ss_pred             CeEEEecCCCCCCccHHHHHHHHHhcCCCcEEEEecCCCCcccccccCCCCCeEEEEeeeCCceeEEEcCchHHHHHHHH
Q 029120           67 PVLLVTNGDGIESPGLVYLVEALVREGLYNVHVCAPQSDKSVSGHSVTLRETIAVSSAEINGATAYEVSGTPVDCVSLAL  146 (198)
Q Consensus        67 ~~ILlTNDDGi~spGI~aL~~aL~~~G~~dV~VvAP~~~qSg~g~siTl~~pl~v~~v~~~g~~~~~V~GTPaDCV~laL  146 (198)
                      |||||||||||+||||++|+++|+ .+ ++|+||||+.||||+||++|+.+|+++++++.   ..|+|+|||+|||.+||
T Consensus         1 mrILlTNDDGi~a~Gi~aL~~al~-~~-~dV~VVAP~~~qSg~s~slTl~~Plr~~~~~~---~~~av~GTPaDCV~lal   75 (252)
T COG0496           1 MRILLTNDDGIHAPGIRALARALR-EG-ADVTVVAPDREQSGASHSLTLHEPLRVRQVDN---GAYAVNGTPADCVILGL   75 (252)
T ss_pred             CeEEEecCCccCCHHHHHHHHHHh-hC-CCEEEEccCCCCcccccccccccCceeeEecc---ceEEecCChHHHHHHHH
Confidence            899999999999999999999999 44 69999999999999999999999999999863   67999999999999999


Q ss_pred             hcccCCCCCCcEEEecCCCCCCCcCcccchhhHHHHHHHHHcCCCCCccc
Q 029120          147 SGALFSWSKPLLVISGINRGSSCGHHMCCCRSQRGINLWCTFSVHIPKLE  196 (198)
Q Consensus       147 ~~~l~~~~~PDLVISGIN~G~N~G~~v~ySGTVgAA~EAa~~G~~iPAIa  196 (198)
                      +.++ +...|||||||||.|.|+|.+++|||||||||||+++|  |||||
T Consensus        76 ~~l~-~~~~pDLVvSGIN~G~Nlg~dv~ySGTVaaA~Ea~~~G--ipsIA  122 (252)
T COG0496          76 NELL-KEPRPDLVVSGINAGANLGDDVIYSGTVAAAMEAALLG--IPAIA  122 (252)
T ss_pred             HHhc-cCCCCCEEEeCccCCCccccceeeeehHHHHHHHHHcC--cccee
Confidence            9865 33569999999999999999999999999999999997  89998

>PLN02846 digalactosyldiacylglycerol synthase

Probab=87.61  E-value=4  Score=39.18  Aligned_cols=40  Identities=15%  Similarity=0.232  Sum_probs=29.5

Q ss_pred             CCCeEEEecC------CCCCCccHHHHHHHHHhcCCCcEEEEecCCC
Q 029120           65 SKPVLLVTNG------DGIESPGLVYLVEALVREGLYNVHVCAPQSD  105 (198)
Q Consensus        65 ~~~~ILlTND------DGi~spGI~aL~~aL~~~G~~dV~VvAP~~~  105 (198)
                      ++|||+|.=|      .|. +--+..+++.|.+.|.|+|+||+|+..
T Consensus         3 ~~mrIaivTdt~lP~vnGv-a~s~~~~a~~L~~~G~heV~vvaP~~~   48 (462)
T PLN02846          3 KKQHIAIFTTASLPWMTGT-AVNPLFRAAYLAKDGDREVTLVIPWLS   48 (462)
T ss_pred             CCCEEEEEEcCCCCCCCCe-eccHHHHHHHHHhcCCcEEEEEecCCc
Confidence            4689888766      344 234566677999999669999999764

>PF13439 Glyco_transf_4: Glycosyltransferase Family 4; PDB: 2JJM_E 3MBO_C 2GEJ_A 2GEK_A

Probab=81.94  E-value=3.2  Score=31.01  Aligned_cols=42  Identities=26%  Similarity=0.346  Sum_probs=28.1

Q ss_pred             EEEecCCCCCCcc----HHHHHHHHHhcCCCcEEEEecCCCCccccc
Q 029120           69 LLVTNGDGIESPG----LVYLVEALVREGLYNVHVCAPQSDKSVSGH  111 (198)
Q Consensus        69 ILlTNDDGi~spG----I~aL~~aL~~~G~~dV~VvAP~~~qSg~g~  111 (198)
                      |||+|.-....-|    +..|+++|.+.| |+|+|++|.....-...
T Consensus         1 ili~~~~~~~~GG~e~~~~~l~~~l~~~G-~~v~v~~~~~~~~~~~~   46 (177)
T PF13439_consen    1 ILITNIFLPNIGGAERVVLNLARALAKRG-HEVTVVSPGVKDPIEEE   46 (177)
T ss_dssp             -EEECC-TTSSSHHHHHHHHHHHHHHHTT--EEEEEESS-TTS-SST
T ss_pred             CEEEEecCCCCChHHHHHHHHHHHHHHCC-CEEEEEEcCCCccchhh
Confidence            6778777766555    567888999999 89999998866554444

>cd03814 GT1_like_2 This family is most closely related to the GT1 family of glycosyltransferases

Probab=81.26  E-value=18  Score=29.87  Aligned_cols=27  Identities=37%  Similarity=0.327  Sum_probs=23.1

Q ss_pred             CccHHHHHHHHHhcCCCcEEEEecCCCC
Q 029120           79 SPGLVYLVEALVREGLYNVHVCAPQSDK  106 (198)
Q Consensus        79 spGI~aL~~aL~~~G~~dV~VvAP~~~q  106 (198)
                      ...+..|+++|.+.| |+|.++.+....
T Consensus        17 ~~~~~~l~~~L~~~g-~~v~~~~~~~~~   43 (364)
T cd03814          17 VRTLQRLVEHLRARG-HEVLVIAPGPFR   43 (364)
T ss_pred             ehHHHHHHHHHHHCC-CEEEEEeCCchh
Confidence            357889999999999 899999987654

Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog

>TIGR01133 murG undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase

Probab=80.85  E-value=5.8  Score=34.01  Aligned_cols=35  Identities=17%  Similarity=0.255  Sum_probs=24.6

Q ss_pred             eEEEe-cCCCCCCccHHHHHHHHHhcCCCcEEEEecC
Q 029120           68 VLLVT-NGDGIESPGLVYLVEALVREGLYNVHVCAPQ  103 (198)
Q Consensus        68 ~ILlT-NDDGi~spGI~aL~~aL~~~G~~dV~VvAP~  103 (198)
                      +|+++ =..|-+.-....|+++|++.| |+|+|+.+.
T Consensus         2 ~i~~~~g~~~g~~~~~~~La~~L~~~g-~eV~vv~~~   37 (348)
T TIGR01133         2 KVVLAAGGTGGHIFPALAVAEELIKRG-VEVLWLGTK   37 (348)
T ss_pred             eEEEEeCccHHHHhHHHHHHHHHHhCC-CEEEEEeCC
Confidence            45554 444444444458999999999 899999864

RL J Bacteriol 1993 Mar;175(6):1841-3

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	198
2e69_A	244	Crystal Structure Of The Stationary Phase Survival		4e-13
1j9j_A	247	Crystal Structure Analysis Of Sure Protein From T.M		4e-13
2e6h_A	244	Crystal Structure Of E37a Mutant Of The Stationary		9e-13
1ilv_A	247	Crystal Structure Analysis Of The Tm107 Length = 24		2e-12
2wqk_A	251	Crystal Structure Of Sure Protein From Aquifex Aeol		5e-11
1l5x_A	280	The 2.0-Angstrom Resolution Crystal Structure Of A		9e-10
2v4n_A	254	Crystal Structure Of Salmonella Typhimurium Sure At		5e-09
2v4o_A	267	Crystal Structure Of Salmonella Typhimurium Sure At		5e-09
3ty2_A	261	Structure Of A 5'-Nucleotidase (Sure) From Coxiella		8e-09

>pdb|2E69|A Chain A, Crystal Structure Of The Stationary Phase Survival Protein Sure From Thermus Thermophilus Hb8 In Complex With Sulfate Length = 244

Iteration: 1
 Score = 71.2 bits (173), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 47/111 (42%), Positives = 63/111 (56%), Gaps = 12/111 (10%)
Query: 69  LLVTNGDGIESPGLVYLVEALVREGLYNVHVCAPQSDKSVSGHSVTLRETIAV----SSA 124
           +LVTN DGI SPGL  L EA  + G   V V AP +++S +GH++T+   +      S  
Sbjct: 3   ILVTNDDGIYSPGLWALAEAASQFG--EVFVAAPDTEQSAAGHAITIAHPVRAYPHPSPL 60
Query: 125 EINGATAYEVSGTPVDCVSLALSGALFSWSKPL-LVISGINRGSSCGHHMC 174
                 AY V GTP DCV+L L   LF    P+ LV+SG+N GS+ GH + 
Sbjct: 61  HAPHFPAYRVRGTPADCVALGLH--LFG---PVDLVLSGVNLGSNLGHEIW 106

>pdb|1J9J|A Chain A, Crystal Structure Analysis Of Sure Protein From T.Maritima Length = 247

Iteration: 1
 Score = 70.9 bits (172), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 40/103 (38%), Positives = 61/103 (59%), Gaps = 5/103 (4%)
Query: 69  LLVTNGDGIESPGLVYLVEALVREGLYNVHVCAPQSDKSVSGHSVTLRETIAVSSAEIN- 127
           +LVTN DGI+S G++ L E L  E  + V V AP  ++S +GHS+T+   + +    I+ 
Sbjct: 3   ILVTNDDGIQSKGIIVLAELLSEE--HEVFVVAPDKERSATGHSITIHVPLWMKKVFISE 60
Query: 128 GATAYEVSGTPVDCVSLALSGALFSWSKPLLVISGINRGSSCG 170
              AY  +GTP DCV LA +  +    +  L++SG+NRG + G
Sbjct: 61  RVVAYSTTGTPADCVKLAYNVVMD--KRVDLIVSGVNRGPNMG 101

>pdb|2E6H|A Chain A, Crystal Structure Of E37a Mutant Of The Stationary Phase Survival Protein Sure From Thermus Thermophilus Hb8 Cocrystallized With Manganese And Amp Length = 244

Iteration: 1
 Score = 69.7 bits (169), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 47/111 (42%), Positives = 62/111 (55%), Gaps = 12/111 (10%)
Query: 69  LLVTNGDGIESPGLVYLVEALVREGLYNVHVCAPQSDKSVSGHSVTLRETIAV----SSA 124
           +LVTN DGI SPGL  L EA  + G   V V AP + +S +GH++T+   +      S  
Sbjct: 3   ILVTNDDGIYSPGLWALAEAASQFG--EVFVAAPDTAQSAAGHAITIAHPVRAYPHPSPL 60
Query: 125 EINGATAYEVSGTPVDCVSLALSGALFSWSKPL-LVISGINRGSSCGHHMC 174
                 AY V GTP DCV+L L   LF    P+ LV+SG+N GS+ GH + 
Sbjct: 61  HAPHFPAYRVRGTPADCVALGLH--LFG---PVDLVLSGVNLGSNLGHEIW 106

>pdb|1ILV|A Chain A, Crystal Structure Analysis Of The Tm107 Length = 247

Iteration: 1
 Score = 68.6 bits (166), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 40/103 (38%), Positives = 60/103 (58%), Gaps = 5/103 (4%)
Query: 69  LLVTNGDGIESPGLVYLVEALVREGLYNVHVCAPQSDKSVSGHSVTLRETIAVSSAEIN- 127
           +LVTN DGI+S G++ L E L  E  + V V AP  ++S +GHS+T+   +      I+ 
Sbjct: 3   ILVTNDDGIQSKGIIVLAELLSEE--HEVFVVAPDKERSATGHSITIHVPLWXKKVFISE 60
Query: 128 GATAYEVSGTPVDCVSLALSGALFSWSKPLLVISGINRGSSCG 170
              AY  +GTP DCV LA +  +    +  L++SG+NRG + G
Sbjct: 61  RVVAYSTTGTPADCVKLAYN--VVXDKRVDLIVSGVNRGPNXG 101

>pdb|2WQK|A Chain A, Crystal Structure Of Sure Protein From Aquifex Aeolicus Length = 251

Iteration: 1
 Score = 63.9 bits (154), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 42/115 (36%), Positives = 57/115 (49%), Gaps = 5/115 (4%)
Query: 67  PVLLVTNGDGIESPGLVYLVEALVREGLYNVHVCAPQSDKSVSGHSVTLRETIAVSSAEI 126
           P  L+ N DG  SPG+  L EAL  + L  V V AP  + S  GHS+T  E + +   + 
Sbjct: 2   PTFLLVNDDGYFSPGINALREAL--KSLGRVVVVAPDRNLSGVGHSLTFTEPLKMRKIDT 59
Query: 127 NGATAYEVSGTPVDCVSLALSGALFSWSKPLLVISGINRGSSCGHHMCCCRSQRG 181
           +  T   + GTP DCV L     +    KP LV+SGIN G + G  +    +  G
Sbjct: 60  DFYTV--IDGTPADCVHLGYR-VILEEKKPDLVLSGINEGPNLGEDITYSGTVSG 111

>pdb|1L5X|A Chain A, The 2.0-Angstrom Resolution Crystal Structure Of A Survival Protein E (Sure) Homolog From Pyrobaculum Aerophilum Length = 280

Iteration: 1
 Score = 59.7 bits (143), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 43/127 (33%), Positives = 61/127 (48%), Gaps = 6/127 (4%)
Query: 69  LLVTNGDGIESPGLVYLVEALVREGLYNVHVCAPQSDKSVSGHSVTLRETIAVSSAEING 128
           +LVTN DG+ SPGL  L +  +  G  +V V AP+S KS +G  +TL + +     ++ G
Sbjct: 3   ILVTNDDGVHSPGLRLLYQFALSLG--DVDVVAPESPKSATGLGITLHKPLRXYEVDLCG 60
Query: 129 ATAYEVSGTPVDCVSLALSGALFSWSKPLLVISGINRGSSCGHHMCCCRSQRGINLWCTF 188
             A   SGTP D V LA  G    +    +V+SGIN G +    +       G       
Sbjct: 61  FRAIATSGTPSDTVYLATFGLGRKYD---IVLSGINLGDNTSLQVILSSGTLGAAFQAAL 117
Query: 189 SVHIPKL 195
            + IP L
Sbjct: 118 -LGIPAL 123

>pdb|2V4N|A Chain A, Crystal Structure Of Salmonella Typhimurium Sure At 1.7 Angstrom Resolution In Orthorhombic Form Length = 254

Iteration: 1
 Score = 57.4 bits (137), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 37/102 (36%), Positives = 63/102 (61%), Gaps = 6/102 (5%)
Query: 69  LLVTNGDGIESPGLVYLVEALVREGLYNVHVCAPQSDKSVSGHSVTLRETIAVSSAEING 128
           +L++N DG+ +PG+  L +AL RE   +V V AP  ++S + +S+TL  ++   + + NG
Sbjct: 4   ILLSNDDGVHAPGIQTLAKAL-RE-FADVQVVAPDRNRSGASNSLTLESSLRTFTFD-NG 60
Query: 129 ATAYEVSGTPVDCVSLALSGALFSWSKPLLVISGINRGSSCG 170
             A ++ GTP DCV L ++  +    +P +V+SGIN G + G
Sbjct: 61  DIAVQM-GTPTDCVYLGVNALMR--PRPDIVVSGINAGPNLG 99

>pdb|2V4O|A Chain A, Crystal Structure Of Salmonella Typhimurium Sure At 2.75 Angstrom Resolution In Monoclinic Form Length = 267

Iteration: 1
 Score = 57.4 bits (137), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 37/102 (36%), Positives = 63/102 (61%), Gaps = 6/102 (5%)
Query: 69  LLVTNGDGIESPGLVYLVEALVREGLYNVHVCAPQSDKSVSGHSVTLRETIAVSSAEING 128
           +L++N DG+ +PG+  L +AL RE   +V V AP  ++S + +S+TL  ++   + + NG
Sbjct: 17  ILLSNDDGVHAPGIQTLAKAL-RE-FADVQVVAPDRNRSGASNSLTLESSLRTFTFD-NG 73
Query: 129 ATAYEVSGTPVDCVSLALSGALFSWSKPLLVISGINRGSSCG 170
             A ++ GTP DCV L ++  +    +P +V+SGIN G + G
Sbjct: 74  DIAVQM-GTPTDCVYLGVNALMR--PRPDIVVSGINAGPNLG 112

>pdb|3TY2|A Chain A, Structure Of A 5'-Nucleotidase (Sure) From Coxiella Burnetii Length = 261

Iteration: 1
 Score = 57.0 bits (136), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 39/102 (38%), Positives = 58/102 (56%), Gaps = 7/102 (6%)
Query: 69  LLVTNGDGIESPGLVYLVEALVREGLYNVHVCAPQSDKSVSGHSVTLRETIAVSSAEING 128
           LL++N DG+ + GL  L + L   G   V V AP  ++S + +S+TL   + + + E NG
Sbjct: 14  LLLSNDDGVYAKGLAILAKTLADLG--EVDVVAPDRNRSGASNSLTLNAPLHIKNLE-NG 70
Query: 129 ATAYEVSGTPVDCVSLALSGALFSWSKPLLVISGINRGSSCG 170
             +  V GTP DCV LA++G L     P  V++GIN G + G
Sbjct: 71  XIS--VEGTPTDCVHLAITGVLP--EXPDXVVAGINAGPNLG 108

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	198
1l5x_A	280	SurviVal protein E; structural genomics, putative	1e-31
3ty2_A	261	5'-nucleotidase SURE; surviVal protein, phosphatas	3e-30
2phj_A	251	5'-nucleotidase SURE; SURE protein, putative acid	3e-30
1j9j_A	247	Stationary phase surviVal protein; SURE protein, u	5e-30
2e6c_A	244	5'-nucleotidase SURE; SURE protein, cowith mangane	2e-29
2v4n_A	254	Multifunctional protein SUR E; hydrolase, surviVal	9e-29

>1l5x_A SurviVal protein E; structural genomics, putative acid phosphatase, mixed alpha/ protein, N-terminal rossmann-fold like; 2.00A {Pyrobaculum aerophilum} SCOP: c.106.1.1 Length = 280

 Score =  114 bits (288), Expect = 1e-31
 Identities = 40/98 (40%), Positives = 54/98 (55%), Gaps = 5/98 (5%)

Query: 70  LVTNGDGIESPGLVYLVEALVREGLYNVHVCAPQSDKSVSGHSVTLRETIAVSSAEINGA 129
           LVTN DG+ SPGL  L +  +  G  +V V AP+S KS +G  +TL + + +   ++ G 
Sbjct: 4   LVTNDDGVHSPGLRLLYQFALSLG--DVDVVAPESPKSATGLGITLHKPLRMYEVDLCGF 61

Query: 130 TAYEVSGTPVDCVSLALSGALFSWSKPLLVISGINRGS 167
            A   SGTP D V LA  G      K  +V+SGIN G 
Sbjct: 62  RAIATSGTPSDTVYLATFGLGR---KYDIVLSGINLGD 96

>3ty2_A 5'-nucleotidase SURE; surviVal protein, phosphatase, hydrolase; HET: MSE; 1.89A {Coxiella burnetii} Length = 261

 Score =  110 bits (278), Expect = 3e-30
 Identities = 38/112 (33%), Positives = 60/112 (53%), Gaps = 7/112 (6%)

Query: 56  SDSTENVDSSKPVLLVTNGDGIESPGLVYLVEALVREGLYNVHVCAPQSDKSVSGHSVTL 115
           S++ +   + K  LL++N DG+ + GL  L + L   G   V V AP  ++S + +S+TL
Sbjct: 1   SNAMKKTATPKLRLLLSNDDGVYAKGLAILAKTLADLG--EVDVVAPDRNRSGASNSLTL 58

Query: 116 RETIAVSSAEINGATAYEVSGTPVDCVSLALSGALFSWSKPLLVISGINRGS 167
              + + + E        V GTP DCV LA++G L     P +V++GIN G 
Sbjct: 59  NAPLHIKNLENG---MISVEGTPTDCVHLAITGVL--PEMPDMVVAGINAGP 105

>1j9j_A Stationary phase surviVal protein; SURE protein, unknown function; 1.90A {Thermotoga maritima} SCOP: c.106.1.1 PDB: 1ilv_A 1j9k_A* 1j9l_A* Length = 247

 Score =  109 bits (276), Expect = 5e-30
 Identities = 38/99 (38%), Positives = 57/99 (57%), Gaps = 5/99 (5%)

Query: 70  LVTNGDGIESPGLVYLVEALVREGLYNVHVCAPQSDKSVSGHSVTLRETIAVSSAEIN-G 128
           LVTN DGI+S G++ L E L     + V V AP  ++S +GHS+T+   + +    I+  
Sbjct: 4   LVTNDDGIQSKGIIVLAELL--SEEHEVFVVAPDKERSATGHSITIHVPLWMKKVFISER 61

Query: 129 ATAYEVSGTPVDCVSLALSGALFSWSKPLLVISGINRGS 167
             AY  +GTP DCV LA +  +    +  L++SG+NRG 
Sbjct: 62  VVAYSTTGTPADCVKLAYNVVM--DKRVDLIVSGVNRGP 98

>2e6c_A 5'-nucleotidase SURE; SURE protein, cowith manganese ION and AMP hydrolase; 2.05A {Thermus thermophilus} PDB: 2e6b_A 2e69_A 2e6e_A 2e6g_A 2e6h_A Length = 244

 Score =  108 bits (272), Expect = 2e-29
 Identities = 41/102 (40%), Positives = 54/102 (52%), Gaps = 10/102 (9%)

Query: 70  LVTNGDGIESPGLVYLVEALVREGLYNVHVCAPQSDKSVSGHSVTLRETIAVSSAE---- 125
           LVTN DGI SPGL  L EA  + G   V V AP +++S +GH++T+   +          
Sbjct: 4   LVTNDDGIYSPGLWALAEAASQFG--EVFVAAPDTEQSAAGHAITIAHPVRAYPHPSPLH 61

Query: 126 INGATAYEVSGTPVDCVSLALSGALFSWSKPLLVISGINRGS 167
                AY V GTP DCV+L L      +    LV+SG+N GS
Sbjct: 62  APHFPAYRVRGTPADCVALGLHL----FGPVDLVLSGVNLGS 99

>2v4n_A Multifunctional protein SUR E; hydrolase, surviVal protein, stationary phase, phosph mononucleotidase, divalent metal ION; 1.7A {Salmonella typhimurium} PDB: 2v4o_A Length = 254

 Score =  106 bits (268), Expect = 9e-29
 Identities = 31/98 (31%), Positives = 52/98 (53%), Gaps = 6/98 (6%)

Query: 70  LVTNGDGIESPGLVYLVEALVREGLYNVHVCAPQSDKSVSGHSVTLRETIAVSSAEINGA 129
           L++N DG+ +PG+  L +AL      +V V AP  ++S + +S+TL  ++       +  
Sbjct: 5   LLSNDDGVHAPGIQTLAKALREFA--DVQVVAPDRNRSGASNSLTLESSLRTF--TFDNG 60

Query: 130 TAYEVSGTPVDCVSLALSGALFSWSKPLLVISGINRGS 167
                 GTP DCV L ++  +    +P +V+SGIN G 
Sbjct: 61  DIAVQMGTPTDCVYLGVNALM--RPRPDIVVSGINAGP 96

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	198
2wqk_A	251	5'-nucleotidase SURE; SURE protein, putative acid	100.0
1j9j_A	247	Stationary phase surviVal protein; SURE protein, u	100.0
2e6c_A	244	5'-nucleotidase SURE; SURE protein, cowith mangane	100.0
2phj_A	251	5'-nucleotidase SURE; SURE protein, putative acid	100.0
1l5x_A	280	SurviVal protein E; structural genomics, putative	100.0
2v4n_A	254	Multifunctional protein SUR E; hydrolase, surviVal	100.0
3ty2_A	261	5'-nucleotidase SURE; surviVal protein, phosphatas	100.0
3fro_A	439	GLGA glycogen synthase; glycosyltransferase family	94.87
3oti_A	398	CALG3; calicheamicin, TDP, structural genomics, PS	89.17
4amg_A	400	Snogd; transferase, polyketide biosynthesis, GT1 f	88.67
2iuy_A	342	Avigt4, glycosyltransferase; antibiotics, family G	87.32
4fzr_A	398	SSFS6; structural genomics, PSI-biology, protein s	85.32
3otg_A	412	CALG1; calicheamicin, TDP, structural genomics, PS	82.69

>2wqk_A 5'-nucleotidase SURE; SURE protein, putative acid phosphatase, structural genomics, 3-D structure, mixed alpha/beta protein, NPPSFA; 1.50A {Aquifex aeolicus}

Probab=100.00  E-value=2.3e-52  Score=361.24  Aligned_cols=124  Identities=35%  Similarity=0.493  Sum_probs=115.3

Q ss_pred             CCeEEEecCCCCCCccHHHHHHHHHhcCCCcEEEEecCCCCcccccccCCCCCeEEEEeeeCCceeEEEcCchHHHHHHH
Q 029120           66 KPVLLVTNGDGIESPGLVYLVEALVREGLYNVHVCAPQSDKSVSGHSVTLRETIAVSSAEINGATAYEVSGTPVDCVSLA  145 (198)
Q Consensus        66 ~~~ILlTNDDGi~spGI~aL~~aL~~~G~~dV~VvAP~~~qSg~g~siTl~~pl~v~~v~~~g~~~~~V~GTPaDCV~la  145 (198)
                      .|||||||||||+||||++|+++|++.|  +|+||||++||||+||++|+++|+++++++  ...+|.|+|||+|||++|
T Consensus         1 Mp~ILlTNDDGi~apGi~~L~~~l~~~g--~V~VvAP~~~~Sg~g~siT~~~pl~~~~~~--~~~~~~v~GTPaDCV~la   76 (251)
T 2wqk_A            1 MPTFLLVNDDGYFSPGINALREALKSLG--RVVVVAPDRNLSGVGHSLTFTEPLKMRKID--TDFYTVIDGTPADCVHLG   76 (251)
T ss_dssp             -CEEEEECSSCTTCHHHHHHHHHHTTTS--EEEEEEESSCCTTSCCSCCCSSCEEEEEEE--TTEEEETTCCHHHHHHHH
T ss_pred             CCEEEEEcCCCCCcHHHHHHHHHHHhCC--CEEEEeeCCCCcccccCcCCCCCceeEEee--ccceeecCCChHHHHhhh
Confidence            3799999999999999999999999987  799999999999999999999999999875  345688999999999999


Q ss_pred             HhcccCCCCCCcEEEecCCCCCCCcCcccchhhHHHHHHHHHcCCCCCccc
Q 029120          146 LSGALFSWSKPLLVISGINRGSSCGHHMCCCRSQRGINLWCTFSVHIPKLE  196 (198)
Q Consensus       146 L~~~l~~~~~PDLVISGIN~G~N~G~~v~ySGTVgAA~EAa~~G~~iPAIa  196 (198)
                      |+++|+ +.+|||||||||+|.|+|.+++||||||||+||+++|  |||||
T Consensus        77 l~~~l~-~~~PDLVvSGIN~G~N~g~dv~ySGTVgAA~Ea~~~G--ipaIA  124 (251)
T 2wqk_A           77 YRVILE-EKKPDLVLSGINEGPNLGEDITYSGTVSGAMEGRILG--IPSIA  124 (251)
T ss_dssp             HHTTTT-TCCCSEEEEEEESSCCCGGGGGGCHHHHHHHHHHHTT--CCEEE
T ss_pred             hhhhcC-CCCCCEEEeCccCCCccccceecchHHHHHHHHHhcC--CCeEE
Confidence            998764 4689999999999999999999999999999999986  89998

>1j9j_A Stationary phase surviVal protein; SURE protein, unknown function; 1.90A {Thermotoga maritima} SCOP: c.106.1.1 PDB: 1ilv_A 1j9k_A* 1j9l_A*

Probab=100.00  E-value=4.4e-52  Score=360.00  Aligned_cols=124  Identities=35%  Similarity=0.560  Sum_probs=116.2

Q ss_pred             CeEEEecCCCCCCccHHHHHHHHHhcCCCcEEEEecCCCCcccccccCCCCCeEEEEeeeC-CceeEEEcCchHHHHHHH
Q 029120           67 PVLLVTNGDGIESPGLVYLVEALVREGLYNVHVCAPQSDKSVSGHSVTLRETIAVSSAEIN-GATAYEVSGTPVDCVSLA  145 (198)
Q Consensus        67 ~~ILlTNDDGi~spGI~aL~~aL~~~G~~dV~VvAP~~~qSg~g~siTl~~pl~v~~v~~~-g~~~~~V~GTPaDCV~la  145 (198)
                      |||||||||||+||||++|+++|++.|  +|+||||++||||+||++|+++||++++++.. +...|+|+|||+|||++|
T Consensus         1 M~ILlTNDDGi~apGi~aL~~~l~~~g--~V~VVAP~~~~Sg~g~siTl~~pl~~~~~~~~~~~~~~~v~GTPaDCV~la   78 (247)
T 1j9j_A            1 MRILVTNDDGIQSKGIIVLAELLSEEH--EVFVVAPDKERSATGHSITIHVPLWMKKVFISERVVAYSTTGTPADCVKLA   78 (247)
T ss_dssp             CEEEEECSSCTTCHHHHHHHHHHTTTS--EEEEEEESSCCTTCTTCCCCSSCCCEEECCCSSSEEEEEESSCHHHHHHHH
T ss_pred             CeEEEEcCCCCCcHhHHHHHHHHHhCC--CEEEEecCCCCcCCcccccCCCCeEEEEeccCCCCceEEECCcHHHHHHHH
Confidence            799999999999999999999999977  89999999999999999999999999998643 445799999999999999


Q ss_pred             HhcccCCCCCCcEEEecCCCCCCCcCcccchhhHHHHHHHHHcCCCCCccc
Q 029120          146 LSGALFSWSKPLLVISGINRGSSCGHHMCCCRSQRGINLWCTFSVHIPKLE  196 (198)
Q Consensus       146 L~~~l~~~~~PDLVISGIN~G~N~G~~v~ySGTVgAA~EAa~~G~~iPAIa  196 (198)
                      |+++|  ..+|||||||||+|.|+|.+++||||||||+||+++|  |||||
T Consensus        79 l~~l~--~~~PDLVvSGIN~G~Nlg~dv~ySGTVgAA~Ea~~~G--iPaIA  125 (247)
T 1j9j_A           79 YNVVM--DKRVDLIVSGVNRGPNMGMDILHSGTVSGAMEGAMMN--IPSIA  125 (247)
T ss_dssp             HHTTS--TTCCSEEEEEEEESCCCGGGGGGCHHHHHHHHHHHTT--CCEEE
T ss_pred             HHhhc--cCCCCEEEECCccCCCCCcCeecchhHHHHHHHHhcC--CCeEE
Confidence            99976  3689999999999999999999999999999999986  89997

>2e6c_A 5'-nucleotidase SURE; SURE protein, cowith manganese ION and AMP hydrolase; 2.05A {Thermus thermophilus} PDB: 2e6b_A 2e69_A 2e6e_A 2e6g_A 2e6h_A

Probab=100.00  E-value=1.9e-51  Score=355.46  Aligned_cols=122  Identities=37%  Similarity=0.555  Sum_probs=114.2

Q ss_pred             CeEEEecCCCCCCccHHHHHHHHHhcCCCcEEEEecCCCCcccccccCCCCCeEEEEeeeC----CceeEEEcCchHHHH
Q 029120           67 PVLLVTNGDGIESPGLVYLVEALVREGLYNVHVCAPQSDKSVSGHSVTLRETIAVSSAEIN----GATAYEVSGTPVDCV  142 (198)
Q Consensus        67 ~~ILlTNDDGi~spGI~aL~~aL~~~G~~dV~VvAP~~~qSg~g~siTl~~pl~v~~v~~~----g~~~~~V~GTPaDCV  142 (198)
                      |||||||||||+||||++|+++|++.|  +|+||||++||||+||++|+++|+++++++..    +...|+|+|||+|||
T Consensus         1 M~ILlTNDDGi~apGi~aL~~~l~~~g--~V~VVAP~~~~Sg~g~siTl~~pl~~~~~~~~~~~~~~~~~~v~GTPaDCV   78 (244)
T 2e6c_A            1 MRILVTNDDGIYSPGLWALAEAASQFG--EVFVAAPDTEQSAAGHAITIAHPVRAYPHPSPLHAPHFPAYRVRGTPADCV   78 (244)
T ss_dssp             CEEEEECSSCTTCHHHHHHHHHHTTTS--EEEEEEECSSCCCCCSSCCCSSCBEEEECCCCTTSCCCCEEEEESCHHHHH
T ss_pred             CeEEEEcCCCCCcHhHHHHHHHHHhCC--CEEEEecCCCCcCCcccccCCCCeEEEEeccCcCCCCCceEEEcCcHHHHH
Confidence            799999999999999999999999877  89999999999999999999999999998643    335699999999999


Q ss_pred             HHHHhcccCCCCCCcEEEecCCCCCCCcCcccchhhHHHHHHHHHcCCCCCccc
Q 029120          143 SLALSGALFSWSKPLLVISGINRGSSCGHHMCCCRSQRGINLWCTFSVHIPKLE  196 (198)
Q Consensus       143 ~laL~~~l~~~~~PDLVISGIN~G~N~G~~v~ySGTVgAA~EAa~~G~~iPAIa  196 (198)
                      ++||+  |  +.+|||||||||+|.|+|.+++||||||||+||+++|  |||||
T Consensus        79 ~lal~--l--~~~PDLVvSGIN~G~Nlg~dv~ySGTVgAA~Ea~~~G--iPaIA  126 (244)
T 2e6c_A           79 ALGLH--L--FGPVDLVLSGVNLGSNLGHEIWHSGTVAAAKQGYLFG--LSAAA  126 (244)
T ss_dssp             HHHHH--H--SCSCCEEEEEEEESCCCGGGGGGCHHHHHHHHHHHTT--CEEEE
T ss_pred             HHHHc--C--CCCCCEEEECCccCCCCCcCeechHhHHHHHHHHhcC--CCeEE
Confidence            99999  4  4689999999999999999999999999999999986  89997

>1l5x_A SurviVal protein E; structural genomics, putative acid phosphatase, mixed alpha/ protein, N-terminal rossmann-fold like; 2.00A {Pyrobaculum aerophilum} SCOP: c.106.1.1

Probab=100.00  E-value=3.8e-51  Score=359.71  Aligned_cols=123  Identities=35%  Similarity=0.465  Sum_probs=116.1

Q ss_pred             CeEEEecCCCCCCccHHHHHHHHHhcCCCcEEEEecCCCCcccccccCCCCCeEEEEeeeCCceeEEEcCchHHHHHHHH
Q 029120           67 PVLLVTNGDGIESPGLVYLVEALVREGLYNVHVCAPQSDKSVSGHSVTLRETIAVSSAEINGATAYEVSGTPVDCVSLAL  146 (198)
Q Consensus        67 ~~ILlTNDDGi~spGI~aL~~aL~~~G~~dV~VvAP~~~qSg~g~siTl~~pl~v~~v~~~g~~~~~V~GTPaDCV~laL  146 (198)
                      |||||||||||+||||++|+++|++.|  +|+||||+++|||+||++|+.+|+++++++..+...|+|+|||+|||++||
T Consensus         1 M~ILlTNDDGi~ApGi~aL~~aL~~~g--~V~VVAP~~~qSg~g~siTl~~pl~~~~~~~~~~~~~~v~GTPaDCV~lal   78 (280)
T 1l5x_A            1 MKILVTNDDGVHSPGLRLLYQFALSLG--DVDVVAPESPKSATGLGITLHKPLRMYEVDLCGFRAIATSGTPSDTVYLAT   78 (280)
T ss_dssp             CEEEEECSSCTTCHHHHHHHHHHGGGS--EEEEEEESSCTTTSCSSCCCSSCBCEEEEECSSSEEEEESSCHHHHHHHHH
T ss_pred             CeEEEEcCCCCCcHhHHHHHHHHHhCC--CEEEEecCCCCcCCcccccCCCCeEEEEeccCCCceEEECCcHHHHHHHHH
Confidence            799999999999999999999999987  899999999999999999999999999987545467999999999999999


Q ss_pred             hcccCCCCCCcEEEecCCCCCCCcCc-ccchhhHHHHHHHHHcCCCCCccc
Q 029120          147 SGALFSWSKPLLVISGINRGSSCGHH-MCCCRSQRGINLWCTFSVHIPKLE  196 (198)
Q Consensus       147 ~~~l~~~~~PDLVISGIN~G~N~G~~-v~ySGTVgAA~EAa~~G~~iPAIa  196 (198)
                      +++   +.+|||||||||+|.|+|.+ ++||||||||+||+++|  |||||
T Consensus        79 ~~l---~~~PDLVvSGIN~G~Nlg~d~v~ySGTVgAA~Ea~~~G--iPaIA  124 (280)
T 1l5x_A           79 FGL---GRKYDIVLSGINLGDNTSLQVILSSGTLGAAFQAALLG--IPALA  124 (280)
T ss_dssp             HHH---TSCCSEEEEEEEEBCCCSHHHHTTCHHHHHHHHHHHTT--CCEEE
T ss_pred             hcC---CCCCCEEEECCccCCcCCccccccchhHHHHHHHHHcC--CCeEE
Confidence            986   36899999999999999999 99999999999999986  89997

>2v4n_A Multifunctional protein SUR E; hydrolase, surviVal protein, stationary phase, phosph mononucleotidase, divalent metal ION; 1.7A {Salmonella typhimurium} PDB: 2v4o_A

Probab=100.00  E-value=4.3e-51  Score=355.22  Aligned_cols=122  Identities=29%  Similarity=0.486  Sum_probs=114.4

Q ss_pred             CCeEEEecCCCCCCccHHHHHHHHHhcCCCcEEEEecCCCCcccccccCCCCCeEEEEeeeCCceeEEEc-CchHHHHHH
Q 029120           66 KPVLLVTNGDGIESPGLVYLVEALVREGLYNVHVCAPQSDKSVSGHSVTLRETIAVSSAEINGATAYEVS-GTPVDCVSL  144 (198)
Q Consensus        66 ~~~ILlTNDDGi~spGI~aL~~aL~~~G~~dV~VvAP~~~qSg~g~siTl~~pl~v~~v~~~g~~~~~V~-GTPaDCV~l  144 (198)
                      .|||||||||||+||||++|+++|++.|  +|+||||++||||+||++|+++||+++++.   ...|+|+ |||+|||++
T Consensus         1 ~M~ILlTNDDGi~apGi~aL~~~L~~~g--~V~VVAP~~~~Sg~g~aiTl~~Pl~~~~~~---~~~~~v~~GTPaDCV~l   75 (254)
T 2v4n_A            1 SMRILLSNDDGVHAPGIQTLAKALREFA--DVQVVAPDRNRSGASNSLTLESSLRTFTFD---NGDIAVQMGTPTDCVYL   75 (254)
T ss_dssp             CCEEEEECSSCTTCHHHHHHHHHHTTTS--EEEEEEESSCCTTCTTCCCCSSCCEEEECT---TSCEEEETCCHHHHHHH
T ss_pred             CCeEEEEcCCCCCCHHHHHHHHHHHhCC--cEEEEeeCCCCcCccCCcCCCCCeEEEEeC---CCCeEECCCCHHHHHHH
Confidence            4899999999999999999999999875  999999999999999999999999998873   3469999 999999999


Q ss_pred             HHhcccCCCCCCcEEEecCCCCCCCcCcccchhhHHHHHHHHHcCCCCCccc
Q 029120          145 ALSGALFSWSKPLLVISGINRGSSCGHHMCCCRSQRGINLWCTFSVHIPKLE  196 (198)
Q Consensus       145 aL~~~l~~~~~PDLVISGIN~G~N~G~~v~ySGTVgAA~EAa~~G~~iPAIa  196 (198)
                      ||+++|  +.+|||||||||+|.|+|.+++||||||||+||+++|  |||||
T Consensus        76 al~~ll--~~~PDLVvSGIN~G~Nlg~dv~ySGTVgAA~Ea~~~G--iPaIA  123 (254)
T 2v4n_A           76 GVNALM--RPRPDIVVSGINAGPNLGDDVIYSGTVAAAMEGRHLG--FPALA  123 (254)
T ss_dssp             HHHTTS--SSCCSEEEEEEEESCCCGGGGGGCHHHHHHHTTTTSS--SCEEE
T ss_pred             HHhhcc--CCCCCEeeeCCcCCCCCCCCeeccHHHHHHHHHHhcC--CCeEE
Confidence            999976  4689999999999999999999999999999999986  89997

>3ty2_A 5'-nucleotidase SURE; surviVal protein, phosphatase, hydrolase; HET: MSE; 1.89A {Coxiella burnetii} SCOP: c.106.1.0

Probab=100.00  E-value=2.9e-51  Score=358.22  Aligned_cols=127  Identities=31%  Similarity=0.473  Sum_probs=113.5

Q ss_pred             CCCCCCCeEEEecCCCCCCccHHHHHHHHHhcCCCcEEEEecCCCCcccccccCCCCCeEEEEeeeCCceeEEEcCchHH
Q 029120           61 NVDSSKPVLLVTNGDGIESPGLVYLVEALVREGLYNVHVCAPQSDKSVSGHSVTLRETIAVSSAEINGATAYEVSGTPVD  140 (198)
Q Consensus        61 ~~~~~~~~ILlTNDDGi~spGI~aL~~aL~~~G~~dV~VvAP~~~qSg~g~siTl~~pl~v~~v~~~g~~~~~V~GTPaD  140 (198)
                      ....++|||||||||||+||||++|+++|++ + |+|+||||+++|||+||++|+++||++++++   ..+|+|+|||+|
T Consensus         6 ~~~~~~m~ILlTNDDGi~apGi~aL~~~l~~-~-~~V~VVAP~~~~Sg~g~siTl~~pl~~~~~~---~~~~~v~GTPaD   80 (261)
T 3ty2_A            6 KTATPKLRLLLSNDDGVYAKGLAILAKTLAD-L-GEVDVVAPDRNRSGASNSLTLNAPLHIKNLE---NGMISVEGTPTD   80 (261)
T ss_dssp             -----CCEEEEECSSCTTCHHHHHHHHHHTT-T-SEEEEEEESSCCTTCTTCCCCSSCEEEEECT---TSCEEESSCHHH
T ss_pred             hccCCCCeEEEEcCCCCCCHHHHHHHHHHHh-c-CCEEEEecCCCCcCcccceecCCCeEEEEec---CCeEEECCCHHH
Confidence            3455669999999999999999999999998 3 6999999999999999999999999999864   346999999999


Q ss_pred             HHHHHHhcccCCCCCCcEEEecCCCCCCCcCcccchhhHHHHHHHHHcCCCCCccc
Q 029120          141 CVSLALSGALFSWSKPLLVISGINRGSSCGHHMCCCRSQRGINLWCTFSVHIPKLE  196 (198)
Q Consensus       141 CV~laL~~~l~~~~~PDLVISGIN~G~N~G~~v~ySGTVgAA~EAa~~G~~iPAIa  196 (198)
                      ||++||++++  ..+|||||||||+|.|+|.+++||||||||+||+++|  |||||
T Consensus        81 CV~lal~~l~--~~~PDLVvSGIN~G~Nlg~dv~ySGTVgAA~Ea~~~G--iPaIA  132 (261)
T 3ty2_A           81 CVHLAITGVL--PEMPDMVVAGINAGPNLGDDVWYSGTVAAAMEGRFLG--LPALA  132 (261)
T ss_dssp             HHHHHTTTTS--SSCCSEEEEEEEESCCCGGGGGTCHHHHHC-CCSTTS--CCEEE
T ss_pred             HHHHHHHHhc--CCCCCEEEECCcCCCCCCCCcCCchHHHHHHHHHHcC--CCeEE
Confidence            9999999876  3689999999999999999999999999999999986  89997

>3fro_A GLGA glycogen synthase; glycosyltransferase family, UDP/ADP-glucose-glycogen synthas rossman folds, transferase; HET: NHF; 2.50A {Pyrococcus abyssi} SCOP: c.87.1.8 PDB: 2bis_A* 3l01_A*

Probab=94.87  E-value=0.16  Score=42.53  Aligned_cols=41  Identities=22%  Similarity=0.218  Sum_probs=31.1

Q ss_pred             CCCeEEEecCCCCC--Cc----cHHHHHHHHHhcCCCcEEEEecCCCC
Q 029120           65 SKPVLLVTNGDGIE--SP----GLVYLVEALVREGLYNVHVCAPQSDK  106 (198)
Q Consensus        65 ~~~~ILlTNDDGi~--sp----GI~aL~~aL~~~G~~dV~VvAP~~~q  106 (198)
                      ++||||+..+.-.-  .-    -+..|+++|.+.| |+|+|++|....
T Consensus         1 r~MkIl~v~~~~~p~~~gG~~~~~~~la~~L~~~G-~~V~v~~~~~~~   47 (439)
T 3fro_A            1 RHMKVLLLGFEFLPVKVGGLAEALTAISEALASLG-HEVLVFTPSHGR   47 (439)
T ss_dssp             CCCEEEEECSCCTTSCSSSHHHHHHHHHHHHHHTT-CEEEEEEECTTC
T ss_pred             CceEEEEEecccCCcccCCHHHHHHHHHHHHHHCC-CeEEEEecCCCC
Confidence            46999998765332  12    3677999999999 999999987654

>3oti_A CALG3; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD C0T; 1.60A {Micromonospora echinospora} PDB: 3d0q_A* 3d0r_A*

Probab=89.17  E-value=0.24  Score=42.08  Aligned_cols=41  Identities=17%  Similarity=0.254  Sum_probs=28.9

Q ss_pred             CCCCCCCeEEEecCCCC-CCccHHHHHHHHHhcCCCcEEEEec
Q 029120           61 NVDSSKPVLLVTNGDGI-ESPGLVYLVEALVREGLYNVHVCAP  102 (198)
Q Consensus        61 ~~~~~~~~ILlTNDDGi-~spGI~aL~~aL~~~G~~dV~VvAP  102 (198)
                      +.+.+.||||++...|. +--....|+++|++.| |+|.|+++
T Consensus        15 ~~~~~~MrIl~~~~~~~Ghv~~~~~La~~L~~~G-heV~v~~~   56 (398)
T 3oti_A           15 HIEGRHMRVLFVSSPGIGHLFPLIQLAWGFRTAG-HDVLIAVA   56 (398)
T ss_dssp             ----CCCEEEEECCSSHHHHGGGHHHHHHHHHTT-CEEEEEES
T ss_pred             chhhhcCEEEEEcCCCcchHhHHHHHHHHHHHCC-CEEEEecc
Confidence            44566799999976432 1223578999999999 99999998

>4amg_A Snogd; transferase, polyketide biosynthesis, GT1 family, nogalamyci; HET: MLY; 2.59A {Streptomyces nogalater} PDB: 4an4_A* 4amb_A*

Probab=88.67  E-value=0.45  Score=39.87  Aligned_cols=47  Identities=26%  Similarity=0.160  Sum_probs=29.1

Q ss_pred             CCCCCCCCCCCeEEEecCCCC--CCccHHHHHHHHHhcCCCcEEEEecCCC
Q 029120           57 DSTENVDSSKPVLLVTNGDGI--ESPGLVYLVEALVREGLYNVHVCAPQSD  105 (198)
Q Consensus        57 ~~~~~~~~~~~~ILlTNDDGi--~spGI~aL~~aL~~~G~~dV~VvAP~~~  105 (198)
                      -.+++.-.+.||||++.=-+.  -.| +.+|+++|++.| |+|+++.+...
T Consensus        13 ~g~~~~~~~~MRIL~~~~p~~GHv~P-~l~LA~~L~~rG-h~Vt~~t~~~~   61 (400)
T 4amg_A           13 LGTENLYFQSMRALFITSPGLSHILP-TVPLAQALRALG-HEVRYATGGDI   61 (400)
T ss_dssp             --------CCCEEEEECCSSHHHHGG-GHHHHHHHHHTT-CEEEEEECSST
T ss_pred             CCcccCCCCCCeEEEECCCchhHHHH-HHHHHHHHHHCC-CEEEEEeCcch
Confidence            345566778899999853221  112 557999999999 99999987653

>2iuy_A Avigt4, glycosyltransferase; antibiotics, family GT-4, avilamycin A; HET: MES; 2.1A {Streptomyces viridochromogenes} PDB: 2iv3_A*

Probab=87.32  E-value=0.42  Score=39.27  Aligned_cols=42  Identities=14%  Similarity=0.101  Sum_probs=29.9

Q ss_pred             CCCCeEEEecCC---------------CC--CCccHHHHHHHHHhcCCCcEEEEecCCCC
Q 029120           64 SSKPVLLVTNGD---------------GI--ESPGLVYLVEALVREGLYNVHVCAPQSDK  106 (198)
Q Consensus        64 ~~~~~ILlTNDD---------------Gi--~spGI~aL~~aL~~~G~~dV~VvAP~~~q  106 (198)
                      |++||||+.+..               .+  ...-+..|+++|.+.| |+|+|+.+....
T Consensus         1 M~~mkIl~v~~~~~~~~~~~~~p~~p~~~gG~~~~~~~l~~~L~~~G-~~v~v~~~~~~~   59 (342)
T 2iuy_A            1 MRPLKVALVNIPLRVPGSDAWISVPPQGYGGIQWVVANLMDGLLELG-HEVFLLGAPGSP   59 (342)
T ss_dssp             --CCEEEEECCCCBCTTSSSBCCSSCSSSCHHHHHHHHHHHHHHHTT-CEEEEESCTTSC
T ss_pred             CCccEEEEEeccccccCcccccccCcccCChHHHHHHHHHHHHHHcC-CeEEEEecCCCC
Confidence            346899998876               11  1123677899999999 899999987644

>4fzr_A SSFS6; structural genomics, PSI-biology, protein structure initiati enzyme discovery for natural product biosynthesis, natPro; 2.40A {Streptomyces SP} PDB: 4g2t_A*

Probab=85.32  E-value=0.52  Score=39.91  Aligned_cols=40  Identities=33%  Similarity=0.185  Sum_probs=27.7

Q ss_pred             CCCCCeEEEecCCCC-CCccHHHHHHHHHhcCCCcEEEEecC
Q 029120           63 DSSKPVLLVTNGDGI-ESPGLVYLVEALVREGLYNVHVCAPQ  103 (198)
Q Consensus        63 ~~~~~~ILlTNDDGi-~spGI~aL~~aL~~~G~~dV~VvAP~  103 (198)
                      ...+||||++..-+. +.-.+..|+++|++.| |+|.|+++.
T Consensus        12 ~~~~MrIl~~~~~~~gh~~~~~~La~~L~~~G-heV~v~~~~   52 (398)
T 4fzr_A           12 RGSHMRILVIAGCSEGFVMPLVPLSWALRAAG-HEVLVAASE   52 (398)
T ss_dssp             ---CCEEEEECCSSHHHHGGGHHHHHHHHHTT-CEEEEEEEG
T ss_pred             CCCceEEEEEcCCCcchHHHHHHHHHHHHHCC-CEEEEEcCH
Confidence            456699998864321 1123568999999999 999999974

>3otg_A CALG1; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD; 2.08A {Micromonospora echinospora} PDB: 3oth_A*

Probab=82.69  E-value=0.87  Score=38.29  Aligned_cols=41  Identities=15%  Similarity=0.118  Sum_probs=28.4

Q ss_pred             CCCCCCeEEEecCCCC-CCccHHHHHHHHHhcCCCcEEEEecC
Q 029120           62 VDSSKPVLLVTNGDGI-ESPGLVYLVEALVREGLYNVHVCAPQ  103 (198)
Q Consensus        62 ~~~~~~~ILlTNDDGi-~spGI~aL~~aL~~~G~~dV~VvAP~  103 (198)
                      .+..+||||++.-.+. +.-.+..|+++|++.| |+|.|+.+.
T Consensus        16 ~~~~~MrIl~~~~~~~Gh~~~~~~la~~L~~~G-heV~v~~~~   57 (412)
T 3otg_A           16 IEGRHMRVLFASLGTHGHTYPLLPLATAARAAG-HEVTFATGE   57 (412)
T ss_dssp             --CCSCEEEEECCSSHHHHGGGHHHHHHHHHTT-CEEEEEECG
T ss_pred             cccceeEEEEEcCCCcccHHHHHHHHHHHHHCC-CEEEEEccH
Confidence            3566799998872221 1122458999999999 899999875

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	198
d1l5xa_	276	c.106.1.1 (A:) SurE homolog PAE2908 (SurE-alpha) {	7e-28
d1j9ja_	247	c.106.1.1 (A:) SurE homolog TM1662 {Thermotoga mar	1e-25

>d1l5xa_ c.106.1.1 (A:) SurE homolog PAE2908 (SurE-alpha) {Archaeon Pyrobaculum aerophilum [TaxId: 13773]} Length = 276

class: Alpha and beta proteins (a/b)
fold: SurE-like
superfamily: SurE-like
family: SurE-like
domain: SurE homolog PAE2908 (SurE-alpha)
species: Archaeon Pyrobaculum aerophilum [TaxId: 13773]

 Score =  104 bits (259), Expect = 7e-28
 Identities = 39/107 (36%), Positives = 55/107 (51%), Gaps = 5/107 (4%)

Query: 70  LVTNGDGIESPGLVYLVEALVREGLYNVHVCAPQSDKSVSGHSVTLRETIAVSSAEINGA 129
           LVTN DG+ SPGL  L +  +  G  +V V AP+S KS +G  +TL + + +   ++ G 
Sbjct: 4   LVTNDDGVHSPGLRLLYQFALSLG--DVDVVAPESPKSATGLGITLHKPLRMYEVDLCGF 61

Query: 130 TAYEVSGTPVDCVSLALSGALFSWSKPLLVISGINRGSSCGHHMCCC 176
            A   SGTP D V LA         K  +V+SGIN G +    +   
Sbjct: 62  RAIATSGTPSDTVYLATF---GLGRKYDIVLSGINLGDNTSLQVILS 105

>d1j9ja_ c.106.1.1 (A:) SurE homolog TM1662 {Thermotoga maritima [TaxId: 2336]} Length = 247

class: Alpha and beta proteins (a/b)
fold: SurE-like
superfamily: SurE-like
family: SurE-like
domain: SurE homolog TM1662
species: Thermotoga maritima [TaxId: 2336]

 Score = 97.1 bits (241), Expect = 1e-25
 Identities = 39/108 (36%), Positives = 60/108 (55%), Gaps = 5/108 (4%)

Query: 69  LLVTNGDGIESPGLVYLVEALVREGLYNVHVCAPQSDKSVSGHSVTLRETIAVSSAEIN- 127
           +LVTN DGI+S G++ L E L     + V V AP  ++S +GHS+T+   + +    I+ 
Sbjct: 3   ILVTNDDGIQSKGIIVLAELL--SEEHEVFVVAPDKERSATGHSITIHVPLWMKKVFISE 60

Query: 128 GATAYEVSGTPVDCVSLALSGALFSWSKPLLVISGINRGSSCGHHMCC 175
              AY  +GTP DCV LA +       +  L++SG+NRG + G  +  
Sbjct: 61  RVVAYSTTGTPADCVKLAYNV--VMDKRVDLIVSGVNRGPNMGMDILH 106

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	198
d1j9ja_	247	SurE homolog TM1662 {Thermotoga maritima [TaxId: 2	100.0
d1l5xa_	276	SurE homolog PAE2908 (SurE-alpha) {Archaeon Pyroba	100.0
d1rzua_	477	Glycogen synthase 1, GlgA {Agrobacterium tumefacie	90.74
d2bisa1	437	Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxI	89.68
d1qo0d_	189	Positive regulator of the amidase operon AmiR {Pse	87.13
d1pn3a_	391	TDP-epi-vancosaminyltransferase GtfA {Amycolatopsi	85.66
d1wd5a_	208	Putative phosphoribosyltransferase TT1426 (TTHA146	83.99

>d1j9ja_ c.106.1.1 (A:) SurE homolog TM1662 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: SurE-like
superfamily: SurE-like
family: SurE-like
domain: SurE homolog TM1662
species: Thermotoga maritima [TaxId: 2336]

Probab=100.00  E-value=3.2e-53  Score=359.20  Aligned_cols=124  Identities=34%  Similarity=0.546  Sum_probs=115.8

Q ss_pred             CeEEEecCCCCCCccHHHHHHHHHhcCCCcEEEEecCCCCcccccccCCCCCeEEEEeeeC-CceeEEEcCchHHHHHHH
Q 029120           67 PVLLVTNGDGIESPGLVYLVEALVREGLYNVHVCAPQSDKSVSGHSVTLRETIAVSSAEIN-GATAYEVSGTPVDCVSLA  145 (198)
Q Consensus        67 ~~ILlTNDDGi~spGI~aL~~aL~~~G~~dV~VvAP~~~qSg~g~siTl~~pl~v~~v~~~-g~~~~~V~GTPaDCV~la  145 (198)
                      |||||||||||+||||++|+++|++ + |+|+||||++||||+||++|+++|+++++++.. +..+|+|+|||||||.+|
T Consensus         1 M~ILltNDDGi~s~gl~~L~~~l~~-~-~~V~vvAP~~~~S~~g~ait~~~~l~~~~~~~~~~~~~~~v~GTPaDcv~~a   78 (247)
T d1j9ja_           1 MRILVTNDDGIQSKGIIVLAELLSE-E-HEVFVVAPDKERSATGHSITIHVPLWMKKVFISERVVAYSTTGTPADCVKLA   78 (247)
T ss_dssp             CEEEEECSSCTTCHHHHHHHHHHTT-T-SEEEEEEESSCCTTCTTCCCCSSCCCEEECCCSSSEEEEEESSCHHHHHHHH
T ss_pred             CeEEEEcCCCCCChHHHHHHHHHhc-C-CeEEEEecCCCCcCCcccccCCCCcceEEeecCCCceEEEeCCchHHHHHHh
Confidence            8999999999999999999999976 4 799999999999999999999999999998653 567899999999999999


Q ss_pred             HhcccCCCCCCcEEEecCCCCCCCcCcccchhhHHHHHHHHHcCCCCCccc
Q 029120          146 LSGALFSWSKPLLVISGINRGSSCGHHMCCCRSQRGINLWCTFSVHIPKLE  196 (198)
Q Consensus       146 L~~~l~~~~~PDLVISGIN~G~N~G~~v~ySGTVgAA~EAa~~G~~iPAIa  196 (198)
                      |.+++  +.+|||||||||+|.|+|.+++||||||||+||+++|  |||||
T Consensus        79 l~~l~--~~~pDlVvSGIN~G~N~g~dv~ySGTVgAA~ea~~~g--ipsiA  125 (247)
T d1j9ja_          79 YNVVM--DKRVDLIVSGVNRGPNMGMDILHSGTVSGAMEGAMMN--IPSIA  125 (247)
T ss_dssp             HHTTS--TTCCSEEEEEEEESCCCGGGGGGCHHHHHHHHHHHTT--CCEEE
T ss_pred             hhhcc--cCcccEEEecccCCCccchhhhhHHHHHHHHHHHhcC--CCcce
Confidence            99754  3689999999999999999999999999999999986  89998

>d1l5xa_ c.106.1.1 (A:) SurE homolog PAE2908 (SurE-alpha) {Archaeon Pyrobaculum aerophilum [TaxId: 13773]}

class: Alpha and beta proteins (a/b)
fold: SurE-like
superfamily: SurE-like
family: SurE-like
domain: SurE homolog PAE2908 (SurE-alpha)
species: Archaeon Pyrobaculum aerophilum [TaxId: 13773]

Probab=100.00  E-value=5.1e-52  Score=358.89  Aligned_cols=123  Identities=35%  Similarity=0.464  Sum_probs=116.2

Q ss_pred             CeEEEecCCCCCCccHHHHHHHHHhcCCCcEEEEecCCCCcccccccCCCCCeEEEEeeeCCceeEEEcCchHHHHHHHH
Q 029120           67 PVLLVTNGDGIESPGLVYLVEALVREGLYNVHVCAPQSDKSVSGHSVTLRETIAVSSAEINGATAYEVSGTPVDCVSLAL  146 (198)
Q Consensus        67 ~~ILlTNDDGi~spGI~aL~~aL~~~G~~dV~VvAP~~~qSg~g~siTl~~pl~v~~v~~~g~~~~~V~GTPaDCV~laL  146 (198)
                      |||||||||||+||||++|+++|++.|  +|+||||++||||+||++|+++|+++++++..+.++|+|+|||||||.+||
T Consensus         1 M~ILlTNDDGi~a~Gl~~L~~~l~~~g--~V~vvAP~~~~Sg~g~ait~~~pl~~~~~~~~~~~~~~v~GTPaDCV~lgl   78 (276)
T d1l5xa_           1 MKILVTNDDGVHSPGLRLLYQFALSLG--DVDVVAPESPKSATGLGITLHKPLRMYEVDLCGFRAIATSGTPSDTVYLAT   78 (276)
T ss_dssp             CEEEEECSSCTTCHHHHHHHHHHGGGS--EEEEEEESSCTTTSCSSCCCSSCBCEEEEECSSSEEEEESSCHHHHHHHHH
T ss_pred             CeEEEEcCCCCCCHHHHHHHHHHHhcC--CEEEEecCCCCcCcccceeCCCCcEEEEeecCCceEEEEcCcchhhhhhhh
Confidence            899999999999999999999999987  799999999999999999999999999998778899999999999999999


Q ss_pred             hcccCCCCCCcEEEecCCCCCCCcCccc-chhhHHHHHHHHHcCCCCCccc
Q 029120          147 SGALFSWSKPLLVISGINRGSSCGHHMC-CCRSQRGINLWCTFSVHIPKLE  196 (198)
Q Consensus       147 ~~~l~~~~~PDLVISGIN~G~N~G~~v~-ySGTVgAA~EAa~~G~~iPAIa  196 (198)
                      .++   .++|||||||||+|.|+|.+++ ||||||||+||+++|  |||||
T Consensus        79 ~~~---~~~pDlVvSGIN~G~N~G~dv~~~SGTVgAA~Ea~~~G--ipsIA  124 (276)
T d1l5xa_          79 FGL---GRKYDIVLSGINLGDNTSLQVILSSGTLGAAFQAALLG--IPALA  124 (276)
T ss_dssp             HHH---TSCCSEEEEEEEEBCCCSHHHHTTCHHHHHHHHHHHTT--CCEEE
T ss_pred             ccC---CCCCCEEEECCcCCccCCceeEEechHHHHHHHHHhcC--CCcee
Confidence            874   3589999999999999999864 699999999999986  89998

>d1rzua_ c.87.1.8 (A:) Glycogen synthase 1, GlgA {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Glycosyl transferases group 1
domain: Glycogen synthase 1, GlgA
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=90.74  E-value=0.61  Score=38.67  Aligned_cols=37  Identities=19%  Similarity=0.143  Sum_probs=26.5

Q ss_pred             CeEEEecCCCC---CCcc----HHHHHHHHHhcCCCcEEEEecCC
Q 029120           67 PVLLVTNGDGI---ESPG----LVYLVEALVREGLYNVHVCAPQS  104 (198)
Q Consensus        67 ~~ILlTNDDGi---~spG----I~aL~~aL~~~G~~dV~VvAP~~  104 (198)
                      ||||..+---+   ..=|    ..+|.++|.+.| |+|.|++|.-
T Consensus         1 M~i~~v~~e~~P~~~~GGl~~vv~~La~~L~~~G-h~V~Vi~P~y   44 (477)
T d1rzua_           1 MNVLSVSSEIYPLIKTGGLADVVGALPIALEAHG-VRTRTLIPGY   44 (477)
T ss_dssp             CEEEEECSCBTTTBCSSHHHHHHHHHHHHHHTTT-CEEEEEEECC
T ss_pred             CEEEEEEEeeecccccCcHHHHHHHHHHHHHHcC-CeEEEEecCC
Confidence            78888744311   1124    477899999999 9999999964

>d2bisa1 c.87.1.8 (A:1-437) Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxId: 29292]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Glycosyl transferases group 1
domain: Glycogen synthase 1, GlgA
species: Pyrococcus abyssi [TaxId: 29292]

Probab=89.68  E-value=0.25  Score=39.22  Aligned_cols=38  Identities=26%  Similarity=0.261  Sum_probs=27.4

Q ss_pred             CeEEEecCCCCC--CccH----HHHHHHHHhcCCCcEEEEecCCC
Q 029120           67 PVLLVTNGDGIE--SPGL----VYLVEALVREGLYNVHVCAPQSD  105 (198)
Q Consensus        67 ~~ILlTNDDGi~--spGI----~aL~~aL~~~G~~dV~VvAP~~~  105 (198)
                      |+||+.-..-.-  .=|+    ..|+++|++.| |+|+|++|..+
T Consensus         1 MkIl~~~~~~pP~~~GG~~~~~~~La~~L~~~G-h~V~Vvtp~~~   44 (437)
T d2bisa1           1 MKVLLLGFEFLPVKVGGLAEALTAISEALASLG-HEVLVFTPSHG   44 (437)
T ss_dssp             CEEEEECSCCTTCCSSSHHHHHHHHHHHHHHTT-CEEEEEEECTT
T ss_pred             CEEEEECCccCCcccCCHHHHHHHHHHHHHHcC-CEEEEEecCCC
Confidence            788885433321  1244    78999999999 99999998654

>d1qo0d_ c.23.1.3 (D:) Positive regulator of the amidase operon AmiR {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: CheY-like
family: Positive regulator of the amidase operon AmiR
domain: Positive regulator of the amidase operon AmiR
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=87.13  E-value=0.28  Score=36.10  Aligned_cols=38  Identities=32%  Similarity=0.365  Sum_probs=29.7

Q ss_pred             CCCCeEEEecCCCCCCccHHHHHHHHHhcCCCcEEEEecCCC
Q 029120           64 SSKPVLLVTNGDGIESPGLVYLVEALVREGLYNVHVCAPQSD  105 (198)
Q Consensus        64 ~~~~~ILlTNDDGi~spGI~aL~~aL~~~G~~dV~VvAP~~~  105 (198)
                      .+.+||||..||-   .--+.|...|++.| |+|..+.+..+
T Consensus         9 l~~~~iLvvdd~~---~~~~~l~~~L~~~G-~~v~~~~~~~~   46 (189)
T d1qo0d_           9 LRELQVLVLNPPG---EVSDALVLQLIRIG-CSVRQCWPPPE   46 (189)
T ss_dssp             GGGCEEEEESCTT---HHHHHHHHHHHHHT-CEEEEECSCCS
T ss_pred             ccCCEEEEEeCCH---HHHHHHHHHHHHcC-CcceecCCHHH
Confidence            4568999999995   45566777888999 89999876554

>d1pn3a_ c.87.1.5 (A:) TDP-epi-vancosaminyltransferase GtfA {Amycolatopsis orientalis [TaxId: 31958]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Gtf glycosyltransferase
domain: TDP-epi-vancosaminyltransferase GtfA
species: Amycolatopsis orientalis [TaxId: 31958]

Probab=85.66  E-value=0.32  Score=37.78  Aligned_cols=34  Identities=32%  Similarity=0.479  Sum_probs=26.8

Q ss_pred             CeEEEecCCCCCCcc----HHHHHHHHHhcCCCcEEEEecCC
Q 029120           67 PVLLVTNGDGIESPG----LVYLVEALVREGLYNVHVCAPQS  104 (198)
Q Consensus        67 ~~ILlTNDDGi~spG----I~aL~~aL~~~G~~dV~VvAP~~  104 (198)
                      ||||++.   +-+.|    +.+|+++|++.| |+|+++++..
T Consensus         1 mril~~~---~gt~Ghi~P~laLA~~L~~rG-h~V~~~~~~~   38 (391)
T d1pn3a_           1 MRVLITG---CGSRGDTEPLVALAARLRELG-ADARMCLPPD   38 (391)
T ss_dssp             CEEEEEE---ESSHHHHHHHHHHHHHHHHTT-CEEEEEECGG
T ss_pred             CEEEEEc---CCChhHHHHHHHHHHHHHHCC-CEEEEEEChh
Confidence            7899964   44433    667999999999 9999998754

>d1wd5a_ c.61.1.1 (A:) Putative phosphoribosyltransferase TT1426 (TTHA1462) {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: PRTase-like
superfamily: PRTase-like
family: Phosphoribosyltransferases (PRTases)
domain: Putative phosphoribosyltransferase TT1426 (TTHA1462)
species: Thermus thermophilus [TaxId: 274]

Probab=83.99  E-value=0.68  Score=35.44  Aligned_cols=43  Identities=16%  Similarity=0.294  Sum_probs=32.8

Q ss_pred             CCCeEEEecCCCCCCcc-HHHHHHHHHhcCCCcEEEEecCCCCcc
Q 029120           65 SKPVLLVTNGDGIESPG-LVYLVEALVREGLYNVHVCAPQSDKSV  108 (198)
Q Consensus        65 ~~~~ILlTNDDGi~spG-I~aL~~aL~~~G~~dV~VvAP~~~qSg  108 (198)
                      +.-++||. ||||.+-+ +.+.++.|++.|-.+|++++|-....+
T Consensus       119 ~gk~ViLV-DD~I~TG~T~~aa~~~L~~~ga~~V~~a~~v~~~~~  162 (208)
T d1wd5a_         119 KGRDVVLV-DDGVATGASMEAALSVVFQEGPRRVVVAVPVASPEA  162 (208)
T ss_dssp             TTSEEEEE-CSCBSSCHHHHHHHHHHHTTCCSEEEEEEEEBCHHH
T ss_pred             CCCEEEEE-cchhhhhHHHHHHHHHHHhcCCCEEEEeeccCChHH
Confidence            44456666 99998754 778999999999778999988655443